RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy7042
(2245 letters)
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain,
immunoglobulin superfamily, transmembrane,
phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A
{Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Length = 389
Score = 352 bits (904), Expect = e-109
Identities = 93/393 (23%), Positives = 152/393 (38%), Gaps = 15/393 (3%)
Query: 90 KPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREI-------SSGARYRVETA 142
+P I+ LK+ +TL C+A G P+P+ W R S R V+
Sbjct: 1 QP-HIIQLKNETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQ 59
Query: 143 GGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTK 202
G LH +V D+G Y CEA + +G S + I P+ Y EG+
Sbjct: 60 HGSSSLHIKDVKLSDSGRYDCEAASRIGGHQKSMYLDIEYAPKFISNQTIYYSWEGNPIN 119
Query: 203 VKIFYAGDQPMEVSLTKNGRVVQSDD--RFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSN 260
+ + P + ++ V+ + + K +I+ I D G Y +N
Sbjct: 120 ISCDVKSNPPASIHWRRDKLVLPAKNTTNLKTYSTGRKMILEIAPTSDNDFGRYNCTATN 179
Query: 261 SSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDIS 320
G+ + + + +P P G + E+++ T + +N P GG+ + HY V+ ++++
Sbjct: 180 HIGTRFQEYILALADVPSSPYGVK-IIELSQTTAKVSFNKPDSHGGVPIHHYQVDVKEVA 238
Query: 321 MPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSP 380
W + + T ++ L Y V AVN G G + I P +PSP
Sbjct: 239 SEIWKIVRSHGVQTMVVLNNLEPNTTYEIRVAAVNGKGQGDYSK--IEIFQTLPVREPSP 296
Query: 381 PGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIP 440
P I G LS K DDGG+ I Y + + I +
Sbjct: 297 PSIHGQP-SSGKSFKLSITKQ-DDGGAPILEYIVKYRSKDKEDQWLEKKVQGNKDHIILE 354
Query: 441 NLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIK 473
+L YE ++ A N G S P+ S+ K
Sbjct: 355 HLQWTMGYEVQITAANRLGYSEPTVYEFSMPPK 387
Score = 352 bits (904), Expect = e-109
Identities = 93/393 (23%), Positives = 152/393 (38%), Gaps = 15/393 (3%)
Query: 1697 KPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREI-------SSGARYRVETA 1749
+P I+ LK+ +TL C+A G P+P+ W R S R V+
Sbjct: 1 QP-HIIQLKNETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQ 59
Query: 1750 GGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTK 1809
G LH +V D+G Y CEA + +G S + I P+ Y EG+
Sbjct: 60 HGSSSLHIKDVKLSDSGRYDCEAASRIGGHQKSMYLDIEYAPKFISNQTIYYSWEGNPIN 119
Query: 1810 VKIFYAGDQPMEVSLTKNGRVVQSDD--RFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSN 1867
+ + P + ++ V+ + + K +I+ I D G Y +N
Sbjct: 120 ISCDVKSNPPASIHWRRDKLVLPAKNTTNLKTYSTGRKMILEIAPTSDNDFGRYNCTATN 179
Query: 1868 SSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDIS 1927
G+ + + + +P P G + E+++ T + +N P GG+ + HY V+ ++++
Sbjct: 180 HIGTRFQEYILALADVPSSPYGVK-IIELSQTTAKVSFNKPDSHGGVPIHHYQVDVKEVA 238
Query: 1928 MPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSP 1987
W + + T ++ L Y V AVN G G + I P +PSP
Sbjct: 239 SEIWKIVRSHGVQTMVVLNNLEPNTTYEIRVAAVNGKGQGDYSK--IEIFQTLPVREPSP 296
Query: 1988 PGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIP 2047
P I G LS K DDGG+ I Y + + I +
Sbjct: 297 PSIHGQP-SSGKSFKLSITKQ-DDGGAPILEYIVKYRSKDKEDQWLEKKVQGNKDHIILE 354
Query: 2048 NLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIK 2080
+L YE ++ A N G S P+ S+ K
Sbjct: 355 HLQWTMGYEVQITAANRLGYSEPTVYEFSMPPK 387
Score = 251 bits (643), Expect = 7e-74
Identities = 69/292 (23%), Positives = 108/292 (36%), Gaps = 13/292 (4%)
Query: 484 IVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREIT-------PSARHHIFAEGDTY 536
I+ L+N +N C G P P I+W + T R + + +
Sbjct: 4 IIQLKNETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSS 63
Query: 537 TLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENVVV 596
+L I V D+ Y C A ++ G L I APKF Y +G + +
Sbjct: 64 SLHIKDVKLSDSGRYDCEAASRIGGHQKSMYLDIEYAPKFISNQT---IYYSWEGNPINI 120
Query: 597 KIPFTGYPKPKITWYRDNEVI--ESGGHFHVETSERHAILTIRDASNVDTAPYRVVAEND 654
P I W RD V+ ++ + ++ R IL I S+ D Y A N
Sbjct: 121 SCDVKSNPPASIHWRRDKLVLPAKNTTNLKTYSTGRKMILEIAPTSDNDFGRYNCTATNH 180
Query: 655 LGMDSAIVKIQISDRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMS 714
+G + ++D P P + ++ + + + P GG I +Y V+ +E
Sbjct: 181 IGTRFQEYILALADVPSSPYGVKIIELSQTTAKVSFNKPDSHGGVPIHHYQVDVKEVASE 240
Query: 715 SWIRV-GNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKDT 765
W V + T + + L P YE RV A N G+ D S T
Sbjct: 241 IWKIVRSHGVQTMVVLNNLEPNTTYEIRVAAVNGKGQGDYSKIEIFQTLPVR 292
Score = 203 bits (519), Expect = 2e-57
Identities = 54/276 (19%), Positives = 91/276 (32%), Gaps = 16/276 (5%)
Query: 1094 RVTSLIENHEYEFRVCAVNAAGQGPWSSSSDIIMCCAPPCAPKITSDLSIRDMTVLAGEE 1153
+ + + + A + G S + P K S+ + G
Sbjct: 66 HIKDVKLSDSGRYDCEAASRIGG---HQKSMYLDIEYAP---KFISNQT--IYYSWEGNP 117
Query: 1154 FTITVPFSGRPKPTPIWTVNGDEVSPDG--RIKFETSENQTIYRNKSAKRATDSGSYTIQ 1211
I+ P + W + + +K ++ + I D G Y
Sbjct: 118 INISCDVKSNPPASIHWRRDKLVLPAKNTTNLKTYSTGRKMILEIAPTSD-NDFGRYNCT 176
Query: 1212 LVNTVGSDSASCKVYVVDKPSPPQGPLDVSDITPESCSLSWKPPLDDGGSPITNYVVEKY 1271
N +G+ + + D PS P G + +++ + +S+ P GG PI +Y V+
Sbjct: 177 ATNHIGTRFQEYILALADVPSSPYGVK-IIELSQTTAKVSFNKPDSHGGVPIHHYQVDVK 235
Query: 1272 ESATGFWSKLSSFVRSPAYDVFGLETNRQYRFRVRAENQYGVSEPLELDNSITAKFPFTV 1331
E A+ W + S + LE N Y RV A N G + + I P
Sbjct: 236 EVASEIWKIVRSHGVQTMVVLNNLEPNTTYEIRVAAVNGKGQGDYSK--IEIFQTLPVRE 293
Query: 1332 PDPPGQPQIVDWDTNNATLMWDRPRTDGGSKIQGYK 1367
P PP + L + DGG+ I Y
Sbjct: 294 PSPPS-IHGQPSSGKSFKLSITKQD-DGGAPILEYI 327
Score = 170 bits (433), Expect = 5e-46
Identities = 49/237 (20%), Positives = 74/237 (31%), Gaps = 36/237 (15%)
Query: 888 DDDEMVLIFEVLDRPHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTV 947
I + D P P + E + + + + P +GG I +Y V+ K+ S +
Sbjct: 182 GTRFQEYILALADVPSSPYGVKIIELSQTTAKVSFNKPDSHGGVPIHHYQVDVKEVASEI 241
Query: 948 WTKVSSYVTTPFVRVRNLAIGSTYEFRVMAENQYGLSKPALTIDPIKAKHPFDVPGAPGA 1007
W V S+ V + NL +TYE RV A N G + P P P
Sbjct: 242 WKIVRSHGVQTMVVLNNLEPNTTYEIRVAAVNGKGQGDYSKIEIFQTL--PVREPSPPS- 298
Query: 1008 PKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWV 1067
G S+ S L + DGG+PI YIV+ R + +
Sbjct: 299 IHGQPSSGKSFKLSI-TKQDDGGAPILEYIVKYRSKDKEDQWLEKKVQGNKDHII----- 352
Query: 1068 SEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPWSSSSD 1124
+ L YE ++ A N G +
Sbjct: 353 ---------------------------LEHLQWTMGYEVQITAANRLGYSEPTVYEF 382
Score = 167 bits (425), Expect = 6e-45
Identities = 56/344 (16%), Positives = 97/344 (28%), Gaps = 42/344 (12%)
Query: 439 IPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNA 498
I ++ + A + G S + I+ P+ I + + +
Sbjct: 67 IKDVKLSDSGRYDCEAASRIG---GHQKSMYLDIEYA-----PKFISNQTIYYSWEGNPI 118
Query: 499 QFQCTITGCPKPTISWLKGSREITPS--ARHHIFAEGDTYTLIINSVYGVDADEYVCRAV 556
C + P +I W + + ++ G L I D Y C A
Sbjct: 119 NISCDVKSNPPASIHWRRDKLVLPAKNTTNLKTYSTGRKMILEIAPTSDNDFGRYNCTAT 178
Query: 557 NKGGVKSTKAELIIMTAPKFNVPPRFRDTA-----------YFDKGENVVVKIPFTGYPK 605
N G + + L + P + + + G P Y
Sbjct: 179 NHIGTRFQEYILALADVPSSPYGVKIIELSQTTAKVSFNKPDSHGGV------PIHHY-- 230
Query: 606 PKITWYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAPYRVVAENDLGM----DSAI 661
++ S V + ++ + + T RV A N G I
Sbjct: 231 --QVDVKEV---ASEIWKIVRSHGVQTMVVLNNLEPNTTYEIRVAAVNGKGQGDYSKIEI 285
Query: 662 VKIQISDRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSWIRVGN 721
+ P PP + S L DGG+ I YIV+ R
Sbjct: 286 FQTLPVREPSPPS-IHGQPSSGKSFKLSITKQD-DGGAPILEYIVKYRSKDKEDQWLEKK 343
Query: 722 TRF--TTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTK 763
+ + + L YE ++ A N G S+P+ + K
Sbjct: 344 VQGNKDHIILEHLQWTMGYEVQITAANRLGYSEPTVYEFSMPPK 387
Score = 139 bits (352), Expect = 2e-35
Identities = 56/334 (16%), Positives = 99/334 (29%), Gaps = 27/334 (8%)
Query: 51 NLVEGNDYEFRIIAVNAIGKSEPSICTTPVKICEFVGGEKPDFIVPLKDLVVPLGKLLTL 110
++ + + A + IG + S ++ P FI G + +
Sbjct: 69 DVKLSDSGRYDCEAASRIGGHQKS-MYLDIE-------YAPKFISNQTIYYSWEGNPINI 120
Query: 111 QCEATGTPVPKCRWLRNGREI--SSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNS 168
C+ P W R+ + + + + G L +D D G Y C A N
Sbjct: 121 SCDVKSNPPASIHWRRDKLVLPAKNTTNLKTYSTGRKMILEIAPTSDNDFGRYNCTATNH 180
Query: 169 VGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKI-----FYAGDQPMEVSLTKNGRV 223
+G + + P P + I E T K+ G P+ + +
Sbjct: 181 IGTRFQEYILALADVP---SSPYGVKIIELSQTTAKVSFNKPDSHGGVPIH-HYQVDVKE 236
Query: 224 VQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSG----SVSGTFTINITGLPGP 279
V S+ ++ + + + V N G S F P P
Sbjct: 237 VASEIWKIVRSHGVQTMVVLNNLEPNTTYEIRVAAVNGKGQGDYSKIEIFQTLPVREPSP 296
Query: 280 PIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMP-HWICISTTCHDTTFIV 338
P + + + L DGG + Y+V+ R W+ + I+
Sbjct: 297 P--SIHGQPSSGKSFKLSITKQD-DGGAPILEYIVKYRSKDKEDQWLEKKVQGNKDHIIL 353
Query: 339 QGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAK 372
+ L Y + A N G P + K
Sbjct: 354 EHLQWTMGYEVQITAANRLGYSEPTVYEFSMPPK 387
Score = 139 bits (352), Expect = 2e-35
Identities = 56/334 (16%), Positives = 99/334 (29%), Gaps = 27/334 (8%)
Query: 1658 NLVEGNDYEFRIIAVNAIGKSEPSICTTPVKICEFVGGEKPDFIVPLKDLVVPLGKLLTL 1717
++ + + A + IG + S ++ P FI G + +
Sbjct: 69 DVKLSDSGRYDCEAASRIGGHQKS-MYLDIE-------YAPKFISNQTIYYSWEGNPINI 120
Query: 1718 QCEATGTPVPKCRWLRNGREI--SSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNS 1775
C+ P W R+ + + + + G L +D D G Y C A N
Sbjct: 121 SCDVKSNPPASIHWRRDKLVLPAKNTTNLKTYSTGRKMILEIAPTSDNDFGRYNCTATNH 180
Query: 1776 VGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKI-----FYAGDQPMEVSLTKNGRV 1830
+G + + P P + I E T K+ G P+ + +
Sbjct: 181 IGTRFQEYILALADVP---SSPYGVKIIELSQTTAKVSFNKPDSHGGVPIH-HYQVDVKE 236
Query: 1831 VQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSG----SVSGTFTINITGLPGP 1886
V S+ ++ + + + V N G S F P P
Sbjct: 237 VASEIWKIVRSHGVQTMVVLNNLEPNTTYEIRVAAVNGKGQGDYSKIEIFQTLPVREPSP 296
Query: 1887 PIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMP-HWICISTTCHDTTFIV 1945
P + + + L DGG + Y+V+ R W+ + I+
Sbjct: 297 P--SIHGQPSSGKSFKLSITKQD-DGGAPILEYIVKYRSKDKEDQWLEKKVQGNKDHIIL 353
Query: 1946 QGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAK 1979
+ L Y + A N G P + K
Sbjct: 354 EHLQWTMGYEVQITAANRLGYSEPTVYEFSMPPK 387
Score = 120 bits (302), Expect = 7e-29
Identities = 38/262 (14%), Positives = 71/262 (27%), Gaps = 84/262 (32%)
Query: 1430 RDITVKAGEDFSIHVPFMAFPQPAAFWFANDSIID-DSDTRVHKQLTMNSASLVVKNSQR 1488
G +I + P + W + ++ + T + T L + +
Sbjct: 108 TIYYSWEGNPINISCDVKSNPPASIHWRRDKLVLPAKNTTNLKTYSTGRKMILEIAPTSD 167
Query: 1489 SDGGQYRLQLKNPAGFDTATLHSRLRTLPDSVNPRCHLPSSTSKERPKFPTHPNHQPWLK 1548
+D G+Y N G L +P S P
Sbjct: 168 NDFGRYNCTATNHIGTRFQEYILALADVPSS------------------PYGV------- 202
Query: 1549 WARASLTSKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTS 1608
K ++ ++ + + ++KP GG PI Y V+ + ++ + W
Sbjct: 203 --------KIIELSQTTAKVSFNKPDSHGGVPIHHYQVDVKEVASEIWKIVR-------- 246
Query: 1609 LKYVLWVSEGKSIGSERGSTAQFLEREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFR 1668
+ ++ + NL YE R
Sbjct: 247 --------------------------------------SHGVQTMVVLNNLEPNTTYEIR 268
Query: 1669 IIAVNAIGKSEPS----ICTTP 1686
+ AVN G+ + S T P
Sbjct: 269 VAAVNGKGQGDYSKIEIFQTLP 290
Score = 92.9 bits (231), Expect = 1e-19
Identities = 46/201 (22%), Positives = 74/201 (36%), Gaps = 16/201 (7%)
Query: 1131 PPCAPKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSEN 1190
P KI +LS V + P S P + V+ EV+ + +
Sbjct: 198 SPYGVKII-ELSQTTAKV------SFNKPDSHGGVPIHHYQVDVKEVASEIWKIVRSHGV 250
Query: 1191 QTIYRNKSAKRATDSGSYTIQLVNTVG----SDSASCKVYVVDKPSPPQGPLDVSDITPE 1246
QT+ + + T + + VN G S + V +PSPP + + +
Sbjct: 251 QTMVVLNNLEPNT-TYEIRVAAVNGKGQGDYSKIEIFQTLPVREPSPP--SIHGQPSSGK 307
Query: 1247 SCSLSWKPPLDDGGSPITNYVVEKYE-SATGFWSKLSSFVRSPAYDVFGLETNRQYRFRV 1305
S LS DDGG+PI Y+V+ W + + L+ Y ++
Sbjct: 308 SFKLSITKQ-DDGGAPILEYIVKYRSKDKEDQWLEKKVQGNKDHIILEHLQWTMGYEVQI 366
Query: 1306 RAENQYGVSEPLELDNSITAK 1326
A N+ G SEP + S+ K
Sbjct: 367 TAANRLGYSEPTVYEFSMPPK 387
Score = 92.6 bits (230), Expect = 1e-19
Identities = 49/277 (17%), Positives = 88/277 (31%), Gaps = 41/277 (14%)
Query: 1135 PKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIW-------TVNGDEVSPDGRIKFET 1187
P I +++ T + T+ G P P W T + S DGRI+ +
Sbjct: 2 PHIIQ---LKNETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKG 58
Query: 1188 SENQTIYRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYVVDKPSPPQGPLDVSDITPES 1247
+ K K +DSG Y + + +G S + + P
Sbjct: 59 QHGSSSLHIKDVKL-SDSGRYDCEAASRIGGHQKSMYLDIEYAPKFISNQTIYYSWEGNP 117
Query: 1248 ----CSLSWKPPLD-----DGGSPITNYVVEKYESATGFWSKLSSFVRSPAYDVFGLETN 1298
C + PP D +TG L + + + FG
Sbjct: 118 INISCDVKSNPPASIHWRRDKLVLPAKNTTNLKTYSTGRKMILE--IAPTSDNDFG---- 171
Query: 1299 RQYRFRVRAENQYGVSEPLELDNSITAKFPFTV---PDPPGQPQIVDWDTNNATLMWDRP 1355
R+ A N G + ++ + P P +I++ A + +++P
Sbjct: 172 ---RYNCTATNHIG---------TRFQEYILALADVPSSPYGVKIIELSQTTAKVSFNKP 219
Query: 1356 RTDGGSKIQGYKMLLKTPTGELPTTIWSKIRPTSSTV 1392
+ GG I Y++ +K E+ + S T +
Sbjct: 220 DSHGGVPIHHYQVDVKEVASEIWKIVRSHGVQTMVVL 256
Score = 89.9 bits (223), Expect = 1e-18
Identities = 23/145 (15%), Positives = 42/145 (28%), Gaps = 13/145 (8%)
Query: 2046 IPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNA 2105
I ++ + A + G S + I+ P+ I + + +
Sbjct: 67 IKDVKLSDSGRYDCEAASRIG---GHQKSMYLDIEYA-----PKFISNQTIYYSWEGNPI 118
Query: 2106 QFQCTITGCPKPTISWLKGSREITPS--ARHHIFAEGDTYTLIINSVYGVDADEYVCRAV 2163
C + P +I W + + ++ G L I D Y C A
Sbjct: 119 NISCDVKSNPPASIHWRRDKLVLPAKNTTNLKTYSTGRKMILEIAPTSDNDFGRYNCTAT 178
Query: 2164 NKGGVKSTKAELIIMTAPKFNVPPR 2188
N G + + L + P P
Sbjct: 179 NHIGTRFQEYILALADVPS---SPY 200
Score = 88.7 bits (220), Expect = 2e-18
Identities = 26/105 (24%), Positives = 38/105 (36%), Gaps = 7/105 (6%)
Query: 2091 IVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREIT-------PSARHHIFAEGDTY 2143
I+ L+N +N C G P P I+W + T R + + +
Sbjct: 4 IIQLKNETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSS 63
Query: 2144 TLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPR 2188
+L I V D+ Y C A ++ G L I APKF
Sbjct: 64 SLHIKDVKLSDSGRYDCEAASRIGGHQKSMYLDIEYAPKFISNQT 108
Score = 81.4 bits (201), Expect = 7e-16
Identities = 23/98 (23%), Positives = 41/98 (41%), Gaps = 2/98 (2%)
Query: 900 DRPHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTV-WTKVSSYVTTP 958
R P ++H +G S L T D GG+ I Y+V+ + + W +
Sbjct: 291 VREPSPPSIHGQPSSGKSFKLSITKQDD-GGAPILEYIVKYRSKDKEDQWLEKKVQGNKD 349
Query: 959 FVRVRNLAIGSTYEFRVMAENQYGLSKPALTIDPIKAK 996
+ + +L YE ++ A N+ G S+P + + K
Sbjct: 350 HIILEHLQWTMGYEVQITAANRLGYSEPTVYEFSMPPK 387
Score = 66.4 bits (162), Expect = 4e-11
Identities = 17/62 (27%), Positives = 27/62 (43%), Gaps = 5/62 (8%)
Query: 22 YIIERREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPS----ICT 77
Y ++ +EV IW + ++ + NL YE R+ AVN G+ + S T
Sbjct: 230 YQVDVKEVASEIWKIVRS-HGVQTMVVLNNLEPNTTYEIRVAAVNGKGQGDYSKIEIFQT 288
Query: 78 TP 79
P
Sbjct: 289 LP 290
Score = 60.6 bits (147), Expect = 3e-09
Identities = 23/131 (17%), Positives = 35/131 (26%), Gaps = 46/131 (35%)
Query: 1557 KGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVS 1616
G S+ S L + DGG+PI YIV+ R
Sbjct: 300 HGQPSSGKSFKLSI-TKQDDGGAPILEYIVKYR--------------------------- 331
Query: 1617 EGKSIGSERGSTAQFLEREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIG 1676
+ + +L YE +I A N +G
Sbjct: 332 ------------------SKDKEDQWLEKKVQGNKDHIILEHLQWTMGYEVQITAANRLG 373
Query: 1677 KSEPSICTTPV 1687
SEP++ +
Sbjct: 374 YSEPTVYEFSM 384
Score = 59.8 bits (145), Expect = 5e-09
Identities = 13/59 (22%), Positives = 23/59 (38%)
Query: 22 YIIERREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPSICTTPV 80
YI++ R + + +L YE +I A N +G SEP++ +
Sbjct: 326 YIVKYRSKDKEDQWLEKKVQGNKDHIILEHLQWTMGYEVQITAANRLGYSEPTVYEFSM 384
Score = 52.9 bits (127), Expect = 7e-07
Identities = 15/87 (17%), Positives = 31/87 (35%), Gaps = 6/87 (6%)
Query: 1430 RDITVKAGEDFSIHVPFMAFPQPAAFWFANDSIID------DSDTRVHKQLTMNSASLVV 1483
++ T ++ P P W D R+ + S+SL +
Sbjct: 8 KNETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHI 67
Query: 1484 KNSQRSDGGQYRLQLKNPAGFDTATLH 1510
K+ + SD G+Y + + G +++
Sbjct: 68 KDVKLSDSGRYDCEAASRIGGHQKSMY 94
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Length = 305
Score = 316 bits (812), Expect = 8e-98
Identities = 107/293 (36%), Positives = 146/293 (49%), Gaps = 5/293 (1%)
Query: 477 AAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIF--AEGD 534
A AP LRN N NA C +TG PKP + W + +EI + +G
Sbjct: 1 GAMAPHFKEELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGG 60
Query: 535 TYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPRFRDTA--YFDKGE 592
+ LII SV DA Y RA N+GG S A L + K ++P + +GE
Sbjct: 61 YHQLIIASVTDDDATVYQVRATNQGGSVSGTASLEVEVPAKIHLPKTLEGMGAVHALRGE 120
Query: 593 NVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSERHA-ILTIRDASNVDTAPYRVVA 651
V +KIPF+G P P ITW + ++I++ GH+ V + ++ D Y V A
Sbjct: 121 VVSIKIPFSGKPDPVITWQKGQDLIDNNGHYQVIVTRSFTSLVFPNGVERKDAGFYVVCA 180
Query: 652 ENDLGMDSAIVKIQISDRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREH 711
+N G+D V++ ++D PDPP+ V D+ DS+ L W P DGGS ITNYIVEK
Sbjct: 181 KNRFGIDQKTVELDVADVPDPPRGVKVSDVSRDSVNLTWTEPASDGGSKITNYIVEKCAT 240
Query: 712 PMSSWIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKD 764
W+RVG R T + L Y+FRV AEN +G S PS S+ TK+
Sbjct: 241 TAERWLRVGQARETRYTVINLFGKTSYQFRVIAENKFGLSKPSEPSEPTITKE 293
Score = 262 bits (671), Expect = 7e-79
Identities = 83/307 (27%), Positives = 139/307 (45%), Gaps = 12/307 (3%)
Query: 87 GGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREI-SSGARYRV-ETAGG 144
G P F L++L V TL C+ TG P P +W R G+EI + G +YR+ E GG
Sbjct: 1 GAMAPHFKEELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGG 60
Query: 145 VFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRID-----RMPNALYIPEGD 199
+L VTD D Y A N G ++ +++ P +I A++ G+
Sbjct: 61 YHQLIIASVTDDDATVYQVRATNQGGSVSGTASLEVEVPAKIHLPKTLEGMGAVHALRGE 120
Query: 200 NTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDY-IIIFIKEIRKEDAGDYTVNL 258
+KI ++G ++ K ++ ++ ++ V + ++F + ++DAG Y V
Sbjct: 121 VVSIKIPFSGKPDPVITWQKGQDLIDNNGHYQVIVTRSFTSLVFPNGVERKDAGFYVVCA 180
Query: 259 SNSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRD 318
N G T +++ +P PP G VS++++ + L W P DGG K+T+Y+VE+
Sbjct: 181 KNRFGIDQKTVELDVADVPDPPRGV-KVSDVSRDSVNLTWTEPASDGGSKITNYIVEKCA 239
Query: 319 ISMPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKP 378
+ W+ + +T + V L Y F V+A N+ G+ P E P K K
Sbjct: 240 TTAERWLRVG-QARETRYTVINLFGKTSYQFRVIAENKFGLSKPSEPSEPTITKED--KT 296
Query: 379 SPPGIPV 385
Sbjct: 297 RAMNYDE 303
Score = 262 bits (671), Expect = 7e-79
Identities = 83/307 (27%), Positives = 139/307 (45%), Gaps = 12/307 (3%)
Query: 1694 GGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREI-SSGARYRV-ETAGG 1751
G P F L++L V TL C+ TG P P +W R G+EI + G +YR+ E GG
Sbjct: 1 GAMAPHFKEELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGG 60
Query: 1752 VFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRID-----RMPNALYIPEGD 1806
+L VTD D Y A N G ++ +++ P +I A++ G+
Sbjct: 61 YHQLIIASVTDDDATVYQVRATNQGGSVSGTASLEVEVPAKIHLPKTLEGMGAVHALRGE 120
Query: 1807 NTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDY-IIIFIKEIRKEDAGDYTVNL 1865
+KI ++G ++ K ++ ++ ++ V + ++F + ++DAG Y V
Sbjct: 121 VVSIKIPFSGKPDPVITWQKGQDLIDNNGHYQVIVTRSFTSLVFPNGVERKDAGFYVVCA 180
Query: 1866 SNSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRD 1925
N G T +++ +P PP G VS++++ + L W P DGG K+T+Y+VE+
Sbjct: 181 KNRFGIDQKTVELDVADVPDPPRGV-KVSDVSRDSVNLTWTEPASDGGSKITNYIVEKCA 239
Query: 1926 ISMPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKP 1985
+ W+ + +T + V L Y F V+A N+ G+ P E P K K
Sbjct: 240 TTAERWLRVG-QARETRYTVINLFGKTSYQFRVIAENKFGLSKPSEPSEPTITKED--KT 296
Query: 1986 SPPGIPV 1992
Sbjct: 297 RAMNYDE 303
Score = 206 bits (525), Expect = 4e-59
Identities = 75/284 (26%), Positives = 122/284 (42%), Gaps = 24/284 (8%)
Query: 1064 VLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLI-----ENHEYEFRVCAVNAAGQGP 1118
V W +GK I ++ + + LI ++ ++V A N G
Sbjct: 36 VKWYRQGKEIIADGL------KYRIQEFKGGYHQLIIASVTDDDATVYQVRATNQGGSVS 89
Query: 1119 WSSSSDIIMCCAPPCAPKITSDLSIR---DMTVLAGEEFTITVPFSGRPKPTPIWTVNGD 1175
++S ++ + KI ++ + L GE +I +PFSG+P P W D
Sbjct: 90 GTASLEVEV------PAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKPDPVITWQKGQD 143
Query: 1176 EVSPDGRIKFETSENQTIYRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYVVDKPSPPQ 1235
+ +G + + + T + D+G Y + N G D + ++ V D P PP+
Sbjct: 144 LIDNNGHYQVIVTRSFTSLVFPNGVERKDAGFYVVCAKNRFGIDQKTVELDVADVPDPPR 203
Query: 1236 GPLDVSDITPESCSLSWKPPLDDGGSPITNYVVEKYESATGFWSKLSSFVRSPAYDVFGL 1295
G VSD++ +S +L+W P DGGS ITNY+VEK + W ++ R Y V L
Sbjct: 204 GV-KVSDVSRDSVNLTWTEPASDGGSKITNYIVEKCATTAERWLRVGQ-ARETRYTVINL 261
Query: 1296 ETNRQYRFRVRAENQYGVSEPLELDNSITAKFPFTVPDPPGQPQ 1339
Y+FRV AEN++G+S+P E K +
Sbjct: 262 FGKTSYQFRVIAENKFGLSKPSEPSEPTITKED--KTRAMNYDE 303
Score = 139 bits (353), Expect = 2e-36
Identities = 68/315 (21%), Positives = 110/315 (34%), Gaps = 30/315 (9%)
Query: 181 GTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGR-VVQSDDRFKFTVLDDYI 239
P L + N + G V + G+ ++ +++
Sbjct: 2 AMAPHFKEELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGGY 61
Query: 240 -IIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINI---TGLPGPPI--GPLDVSEITKHT 293
+ I + +DA Y V +N GSVSGT ++ + + P G V +
Sbjct: 62 HQLIIASVTDDDATVYQVRATNQGGSVSGTASLEVEVPAKIHLPKTLEGMGAVHALRGEV 121
Query: 294 ----CTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHDTTFIVQGLTEGQEYLF 349
P +T + + H+ I T + G+ +
Sbjct: 122 VSIKIPFSGKPD-----PVITWQKGQDLIDNNGHYQVIVTRSFTSLVFPNGVERKDAGFY 176
Query: 350 HVMAVNENGMGPPLEGINPIKAK---SPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGG 406
V A N G+ + D P PP V+ V D VNL+W +P DGG
Sbjct: 177 VVCAKNRFGI---------DQKTVELDVADVPDPPRGVKVSDVSRDSVNLTWTEPASDGG 227
Query: 407 SRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSA 466
S+I Y ++K ++ W RV ++ + NL Y+FRV A+N+ GLS PS
Sbjct: 228 SKITNYIVEKCATTAERWLRVGQ--ARETRYTVINLFGKTSYQFRVIAENKFGLSKPSEP 285
Query: 467 SNSVQIKDPMAAKAP 481
S K+
Sbjct: 286 SEPTITKEDKTRAMN 300
Score = 139 bits (353), Expect = 2e-36
Identities = 68/315 (21%), Positives = 110/315 (34%), Gaps = 30/315 (9%)
Query: 1788 GTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGR-VVQSDDRFKFTVLDDYI 1846
P L + N + G V + G+ ++ +++
Sbjct: 2 AMAPHFKEELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGGY 61
Query: 1847 -IIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINI---TGLPGPPI--GPLDVSEITKHT 1900
+ I + +DA Y V +N GSVSGT ++ + + P G V +
Sbjct: 62 HQLIIASVTDDDATVYQVRATNQGGSVSGTASLEVEVPAKIHLPKTLEGMGAVHALRGEV 121
Query: 1901 ----CTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHDTTFIVQGLTEGQEYLF 1956
P +T + + H+ I T + G+ +
Sbjct: 122 VSIKIPFSGKPD-----PVITWQKGQDLIDNNGHYQVIVTRSFTSLVFPNGVERKDAGFY 176
Query: 1957 HVMAVNENGMGPPLEGINPIKAK---SPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGG 2013
V A N G+ + D P PP V+ V D VNL+W +P DGG
Sbjct: 177 VVCAKNRFGI---------DQKTVELDVADVPDPPRGVKVSDVSRDSVNLTWTEPASDGG 227
Query: 2014 SRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSA 2073
S+I Y ++K ++ W RV ++ + NL Y+FRV A+N+ GLS PS
Sbjct: 228 SKITNYIVEKCATTAERWLRVGQ--ARETRYTVINLFGKTSYQFRVIAENKFGLSKPSEP 285
Query: 2074 SNSVQIKDPMAAKAP 2088
S K+
Sbjct: 286 SEPTITKEDKTRAMN 300
Score = 133 bits (336), Expect = 5e-34
Identities = 61/282 (21%), Positives = 95/282 (33%), Gaps = 83/282 (29%)
Query: 1410 SGPVIVEEQP--NKPVMDLSGVRDITVKAGEDFSIHVPFMAFPQPAAFWFANDSIIDDSD 1467
+ + VE + P L G+ + GE SI +PF P P W +ID++
Sbjct: 91 TASLEVEVPAKIHLPKT-LEGMGAVHALRGEVVSIKIPFSGKPDPVITWQKGQDLIDNNG 149
Query: 1468 TRVHKQLTMNSASLVVKNSQRSDGGQYRLQLKNPAGFDTATLHSRLRTLPDSVNPRCHLP 1527
++ + +R D G Y + KN G D T+ + +PD
Sbjct: 150 HYQVIVTRSFTSLVFPNGVERKDAGFYVVCAKNRFGIDQKTVELDVADVPDP-------- 201
Query: 1528 SSTSKERPKFPTHPNHQPWLKWARASLTSKGVDSTEDSISLVWSKPRHDGGSPIQRYIVE 1587
P K D + DS++L W++P DGGS I YIVE
Sbjct: 202 ----------PRGV---------------KVSDVSRDSVNLTWTEPASDGGSKITNYIVE 236
Query: 1588 KRLISDDKWIKASMAHIPDTSLKYVLWVSEGKSIGSERGSTAQFLEREVGGAIWLKCNDY 1647
K + ++W++
Sbjct: 237 KCATTAERWLRVG----------------------------------------------- 249
Query: 1648 NVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPSICTTPVKI 1689
E ++V+NL Y+FR+IA N G S+PS + P
Sbjct: 250 QARETRYTVINLFGKTSYQFRVIAENKFGLSKPSEPSEPTIT 291
Score = 117 bits (295), Expect = 1e-28
Identities = 44/124 (35%), Positives = 66/124 (53%), Gaps = 3/124 (2%)
Query: 888 DDDEMVLIFEVLDRPHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTV 947
D+ + +V D P PP + + + DS+ L WT P +GGS+ITNY+VEK +
Sbjct: 185 GIDQKTVELDVADVPDPPRGVKVSDVSRDSVNLTWTEPASDGGSKITNYIVEKCATTAER 244
Query: 948 WTKVSSYVTTPFVRVRNLAIGSTYEFRVMAENQYGLSKPALTIDPIKAKHPFDVPGAPGA 1007
W +V T + V NL ++Y+FRV+AEN++GLSKP+ +P K A
Sbjct: 245 WLRVGQARETRYT-VINLFGKTSYQFRVIAENKFGLSKPSEPSEPTITKED--KTRAMNY 301
Query: 1008 PKGV 1011
+ V
Sbjct: 302 DEEV 305
Score = 111 bits (280), Expect = 1e-26
Identities = 37/112 (33%), Positives = 48/112 (42%), Gaps = 2/112 (1%)
Query: 2084 AAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIF--AEGD 2141
A AP LRN N NA C +TG PKP + W + +EI + +G
Sbjct: 1 GAMAPHFKEELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGG 60
Query: 2142 TYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPRFRDTA 2193
+ LII SV DA Y RA N+GG S A L + K ++P
Sbjct: 61 YHQLIIASVTDDDATVYQVRATNQGGSVSGTASLEVEVPAKIHLPKTLEGMG 112
Score = 97.9 bits (244), Expect = 6e-22
Identities = 66/322 (20%), Positives = 104/322 (32%), Gaps = 58/322 (18%)
Query: 1134 APKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDG---RIKFETSEN 1190
AP +L R++ V T+ +G PKP W G E+ DG RI+
Sbjct: 4 APHFKEEL--RNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGGY 61
Query: 1191 QTIYRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYVVDKPS--PPQGPLDVSDITPE-- 1246
+ D+ Y ++ N GS S + + V P+ + +
Sbjct: 62 HQLIIASVTD--DDATVYQVRATNQGGSVSGTASLEVEVPAKIHLPKTLEGMGAVHALRG 119
Query: 1247 -----SCSLSWKPPLDD----GGSPITNYVVEKYESATGFWSKLSSFVRSPAYDVFGLET 1297
S KP G I N + F S + G+E
Sbjct: 120 EVVSIKIPFSGKPDPVITWQKGQDLIDNNGHYQVIVTRSFTSLVF---------PNGVER 170
Query: 1298 NRQYRFRVRAENQYGVSEPLELDNSITAKFPFTV---PDPPGQPQIVDWDTNNATLMWDR 1354
+ V A+N++G V PDPP ++ D ++ L W
Sbjct: 171 KDAGFYVVCAKNRFG---------IDQKTVELDVADVPDPPRGVKVSDVSRDSVNLTWTE 221
Query: 1355 PRTDGGSKIQGYKMLLKTPTGELPTTIWSKIRPTSSTVYC-KDTTMNSS--------N-- 1403
P +DGGSKI Y + W ++ T Y + +S N
Sbjct: 222 PASDGGSKITNYIVEKC----ATTAERWLRVGQARETRYTVINLFGKTSYQFRVIAENKF 277
Query: 1404 --SEPGKQSGPVIVEEQPNKPV 1423
S+P + S P I +E + +
Sbjct: 278 GLSKPSEPSEPTITKEDKTRAM 299
Score = 96.8 bits (241), Expect = 2e-21
Identities = 39/156 (25%), Positives = 62/156 (39%), Gaps = 40/156 (25%)
Query: 972 EFRVMAENQYGLSKPALTIDPIKAKHPFDVPGAPGAPKGVDSTEDSISLVWSKPRHDGGS 1031
+ V A+N++G+ + + +D DVP P K D + DS++L W++P DGGS
Sbjct: 175 FYVVCAKNRFGIDQKTVELDVA------DVPDPPRGVKVSDVSRDSVNLTWTEPASDGGS 228
Query: 1032 PIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEGKSIGSERGSTAQFLELLLMFI 1091
I YIVEK + ++W++ +T
Sbjct: 229 KITNYIVEKCATTAERWLRV--GQARETRYT----------------------------- 257
Query: 1092 PNRVTSLIENHEYEFRVCAVNAAGQGPWSSSSDIIM 1127
V +L Y+FRV A N G S S+ +
Sbjct: 258 ---VINLFGKTSYQFRVIAENKFGLSKPSEPSEPTI 290
Score = 93.7 bits (233), Expect = 1e-20
Identities = 34/144 (23%), Positives = 61/144 (42%), Gaps = 7/144 (4%)
Query: 439 IPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNA 498
I ++ + ++V A N+ G S + S++++ P P+ + + +A++
Sbjct: 66 IASVTDDDATVYQVRATNQGG---SVSGTASLEVEVPAKIHLPKTLEGMGAVHALRGEVV 122
Query: 499 QFQCTITGCPKPTISWLKGSREITPSARHHIFAEGD-TYTLIINSVYGVDADEYVCRAVN 557
+ +G P P I+W KG I + + + T + N V DA YV A N
Sbjct: 123 SIKIPFSGKPDPVITWQKGQDLIDNNGHYQVIVTRSFTSLVFPNGVERKDAGFYVVCAKN 182
Query: 558 KGGVKSTKAELIIMTAPKFNVPPR 581
+ G+ EL + P PPR
Sbjct: 183 RFGIDQKTVELDVADVPD---PPR 203
Score = 93.7 bits (233), Expect = 1e-20
Identities = 34/144 (23%), Positives = 61/144 (42%), Gaps = 7/144 (4%)
Query: 2046 IPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNA 2105
I ++ + ++V A N+ G S + S++++ P P+ + + +A++
Sbjct: 66 IASVTDDDATVYQVRATNQGG---SVSGTASLEVEVPAKIHLPKTLEGMGAVHALRGEVV 122
Query: 2106 QFQCTITGCPKPTISWLKGSREITPSARHHIFAEGD-TYTLIINSVYGVDADEYVCRAVN 2164
+ +G P P I+W KG I + + + T + N V DA YV A N
Sbjct: 123 SIKIPFSGKPDPVITWQKGQDLIDNNGHYQVIVTRSFTSLVFPNGVERKDAGFYVVCAKN 182
Query: 2165 KGGVKSTKAELIIMTAPKFNVPPR 2188
+ G+ EL + P PPR
Sbjct: 183 RFGIDQKTVELDVADVPD---PPR 203
Score = 74.0 bits (182), Expect = 6e-14
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Query: 22 YIIERREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPSICTTPVK 81
YI+E+ WL+ E ++V+NL Y+FR+IA N G S+PS + P
Sbjct: 233 YIVEKCATTAERWLRVGQ--ARETRYTVINLFGKTSYQFRVIAENKFGLSKPSEPSEPTI 290
Query: 82 I 82
Sbjct: 291 T 291
Score = 55.9 bits (135), Expect = 5e-08
Identities = 13/95 (13%), Positives = 33/95 (34%), Gaps = 1/95 (1%)
Query: 1430 RDITVKAGEDFSIHVPFMAFPQPAAFWFANDSIIDDSDTRVH-KQLTMNSASLVVKNSQR 1488
R++ V+ + ++ P+P W+ I + ++ L++ +
Sbjct: 12 RNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTD 71
Query: 1489 SDGGQYRLQLKNPAGFDTATLHSRLRTLPDSVNPR 1523
D Y+++ N G + T + P+
Sbjct: 72 DDATVYQVRATNQGGSVSGTASLEVEVPAKIHLPK 106
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33;
2.40A {Caenorhabditis elegans} PDB: 1koa_A
Length = 573
Score = 300 bits (770), Expect = 1e-88
Identities = 119/235 (50%), Positives = 155/235 (65%), Gaps = 3/235 (1%)
Query: 663 KIQISDRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSWIRVGNT 722
+ P+PP+FP +E+I +++ L W+ P DGGS +TNY +EKRE SW +
Sbjct: 3 MVADVPEPEPPRFPIIENILDEAVILSWKPPALDGGSLVTNYTIEKREAMGGSWSPCAKS 62
Query: 723 RFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKDTFKKQIKKRQYDFDETGK 782
R+T I GL G QYEFR+ AEN +G+S P + + ++ ++R YD DE GK
Sbjct: 63 RYTYTTIEGLRAGKQYEFRIIAENKHGQSKPCEPTAPVLIPG--DERKRRRGYDVDEQGK 120
Query: 783 KIRGKADEKVSDYDQYVFDIYSKYVPQPVDIKTSSVYDHYDILEEIGTGAFGVVHRCRER 842
+RGK S+YD YVFDI+ +Y PQPV+IK V DHYDI EE+GTGAFGVVHR ER
Sbjct: 121 IVRGKGTVS-SNYDNYVFDIWKQYYPQPVEIKHDHVLDHYDIHEELGTGAFGVVHRVTER 179
Query: 843 KTGNIFAAKFIPVSHNLEKELIRKEIDIMNQLHHPKLINLHDAFEDDDEMVLIFE 897
TGN FAAKF+ H +KE +RKEI M+ L HP L+NLHDAFEDD+EMV+I+E
Sbjct: 180 ATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYE 234
Score = 117 bits (295), Expect = 5e-27
Identities = 41/116 (35%), Positives = 58/116 (50%), Gaps = 2/116 (1%)
Query: 1224 KVYVVDKPSPPQGPLDVSDITPESCSLSWKPPLDDGGSPITNYVVEKYESATGFWSKLSS 1283
V V +P PP+ P+ + +I E+ LSWKPP DGGS +TNY +EK E+ G WS +
Sbjct: 3 MVADVPEPEPPRFPI-IENILDEAVILSWKPPALDGGSLVTNYTIEKREAMGGSWSPCAK 61
Query: 1284 FVRSPAYDVFGLETNRQYRFRVRAENQYGVSEPLELDNSITAKFPFTVPDPPGQPQ 1339
R + GL +QY FR+ AEN++G S+P E +
Sbjct: 62 -SRYTYTTIEGLRAGKQYEFRIIAENKHGQSKPCEPTAPVLIPGDERKRRRGYDVD 116
Score = 101 bits (253), Expect = 8e-22
Identities = 34/107 (31%), Positives = 49/107 (45%), Gaps = 2/107 (1%)
Query: 376 DKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPS 435
+P PP P++ + + V LSW P DGGS + Y I+K E +W A +
Sbjct: 8 PEPEPPRFPIIENILDEAVILSWKPPALDGGSLVTNYTIEKREAMGGSWSP--CAKSRYT 65
Query: 436 QINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPE 482
I L G+QYEFR+ A+N+ G S P + V I +
Sbjct: 66 YTTIEGLRAGKQYEFRIIAENKHGQSKPCEPTAPVLIPGDERKRRRG 112
Score = 101 bits (253), Expect = 8e-22
Identities = 34/107 (31%), Positives = 49/107 (45%), Gaps = 2/107 (1%)
Query: 1983 DKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPS 2042
+P PP P++ + + V LSW P DGGS + Y I+K E +W A +
Sbjct: 8 PEPEPPRFPIIENILDEAVILSWKPPALDGGSLVTNYTIEKREAMGGSWSP--CAKSRYT 65
Query: 2043 QINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPE 2089
I L G+QYEFR+ A+N+ G S P + V I +
Sbjct: 66 YTTIEGLRAGKQYEFRIIAENKHGQSKPCEPTAPVLIPGDERKRRRG 112
Score = 100 bits (251), Expect = 1e-21
Identities = 35/148 (23%), Positives = 60/148 (40%), Gaps = 4/148 (2%)
Query: 897 EVLDRPHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTKVSSYVT 956
+ P PP + +++ L W PP +GGS +TNY +EK++ W+ +
Sbjct: 5 ADVPEPEPPRFPIIENILDEAVILSWKPPALDGGSLVTNYTIEKREAMGGSWSPCAKSRY 64
Query: 957 TPFVRVRNLAIGSTYEFRVMAENQYGLSKPALTIDPIKAKHPF---DVPGAPGAPKGVDS 1013
T + + L G YEFR++AEN++G SKP P+ +
Sbjct: 65 T-YTTIEGLRAGKQYEFRIIAENKHGQSKPCEPTAPVLIPGDERKRRRGYDVDEQGKIVR 123
Query: 1014 TEDSISLVWSKPRHDGGSPIQRYIVEKR 1041
+ ++S + D VE +
Sbjct: 124 GKGTVSSNYDNYVFDIWKQYYPQPVEIK 151
Score = 94.5 bits (235), Expect = 1e-19
Identities = 28/110 (25%), Positives = 40/110 (36%)
Query: 461 SLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSRE 520
+ + P IV + +A F C + P ++W K RE
Sbjct: 463 KHRPQEYSIRDAFWDRSEAQPRFIVKPYGTEVGEGQSANFYCRVIASSPPVVTWHKDDRE 522
Query: 521 ITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELII 570
+ S ++ G+ Y L IN V G D EY RA N G K L +
Sbjct: 523 LKQSVKYMKRYNGNDYGLTINRVKGDDKGEYTVRAKNSYGTKEEIVFLNV 572
Score = 94.5 bits (235), Expect = 1e-19
Identities = 28/110 (25%), Positives = 40/110 (36%)
Query: 2068 SLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSRE 2127
+ + P IV + +A F C + P ++W K RE
Sbjct: 463 KHRPQEYSIRDAFWDRSEAQPRFIVKPYGTEVGEGQSANFYCRVIASSPPVVTWHKDDRE 522
Query: 2128 ITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELII 2177
+ S ++ G+ Y L IN V G D EY RA N G K L +
Sbjct: 523 LKQSVKYMKRYNGNDYGLTINRVKGDDKGEYTVRAKNSYGTKEEIVFLNV 572
Score = 94.5 bits (235), Expect = 1e-19
Identities = 31/111 (27%), Positives = 50/111 (45%), Gaps = 2/111 (1%)
Query: 270 TINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICIST 329
+ P PP P+ + I L W PP DGG VT+Y +E+R+ W +
Sbjct: 3 MVADVPEPEPPRFPI-IENILDEAVILSWKPPALDGGSLVTNYTIEKREAMGGSWSPCAK 61
Query: 330 TCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSP 380
+ + T ++GL G++Y F ++A N++G P E P+ K
Sbjct: 62 SRY-TYTTIEGLRAGKQYEFRIIAENKHGQSKPCEPTAPVLIPGDERKRRR 111
Score = 94.5 bits (235), Expect = 1e-19
Identities = 31/111 (27%), Positives = 50/111 (45%), Gaps = 2/111 (1%)
Query: 1877 TINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICIST 1936
+ P PP P+ + I L W PP DGG VT+Y +E+R+ W +
Sbjct: 3 MVADVPEPEPPRFPI-IENILDEAVILSWKPPALDGGSLVTNYTIEKREAMGGSWSPCAK 61
Query: 1937 TCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSP 1987
+ + T ++GL G++Y F ++A N++G P E P+ K
Sbjct: 62 SRY-TYTTIEGLRAGKQYEFRIIAENKHGQSKPCEPTAPVLIPGDERKRRR 111
Score = 78.7 bits (194), Expect = 1e-14
Identities = 27/141 (19%), Positives = 41/141 (29%), Gaps = 34/141 (24%)
Query: 1000 DVPGAPGAPKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDT 1059
P P P + ++++ L W P DGGS + Y +EKR W A T
Sbjct: 8 PEPEPPRFPIIENILDEAVILSWKPPALDGGSLVTNYTIEKREAMGGSWSPC--AKSRYT 65
Query: 1060 SLKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPW 1119
+ L +YEFR+ A N GQ
Sbjct: 66 YT--------------------------------TIEGLRAGKQYEFRIIAENKHGQSKP 93
Query: 1120 SSSSDIIMCCAPPCAPKITSD 1140
+ ++ + D
Sbjct: 94 CEPTAPVLIPGDERKRRRGYD 114
Score = 76.8 bits (189), Expect = 4e-14
Identities = 24/97 (24%), Positives = 35/97 (36%)
Query: 84 EFVGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAG 143
+P FIV V G+ C + P W ++ RE+ +Y G
Sbjct: 476 WDRSEAQPRFIVKPYGTEVGEGQSANFYCRVIASSPPVVTWHKDDRELKQSVKYMKRYNG 535
Query: 144 GVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKI 180
+ L N V D G+YT A NS G + +
Sbjct: 536 NDYGLTINRVKGDDKGEYTVRAKNSYGTKEEIVFLNV 572
Score = 76.8 bits (189), Expect = 4e-14
Identities = 24/97 (24%), Positives = 35/97 (36%)
Query: 1691 EFVGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAG 1750
+P FIV V G+ C + P W ++ RE+ +Y G
Sbjct: 476 WDRSEAQPRFIVKPYGTEVGEGQSANFYCRVIASSPPVVTWHKDDRELKQSVKYMKRYNG 535
Query: 1751 GVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKI 1787
+ L N V D G+YT A NS G + +
Sbjct: 536 NDYGLTINRVKGDDKGEYTVRAKNSYGTKEEIVFLNV 572
Score = 74.5 bits (183), Expect = 2e-13
Identities = 29/131 (22%), Positives = 41/131 (31%), Gaps = 47/131 (35%)
Query: 1559 VDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEG 1618
+ ++++ L W P DGGS + Y +EKR W +
Sbjct: 19 ENILDEAVILSWKPPALDGGSLVTNYTIEKREAMGGSWSPCA------------------ 60
Query: 1619 KSIGSERGSTAQFLEREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKS 1678
++ L G YEFRIIA N G+S
Sbjct: 61 -----------------------------KSRYTYTTIEGLRAGKQYEFRIIAENKHGQS 91
Query: 1679 EPSICTTPVKI 1689
+P T PV I
Sbjct: 92 KPCEPTAPVLI 102
Score = 67.2 bits (164), Expect = 4e-11
Identities = 16/77 (20%), Positives = 30/77 (38%)
Query: 591 GENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAPYRVV 650
G++ P +TW++D+ ++ + + LTI D Y V
Sbjct: 497 GQSANFYCRVIASSPPVVTWHKDDRELKQSVKYMKRYNGNDYGLTINRVKGDDKGEYTVR 556
Query: 651 AENDLGMDSAIVKIQIS 667
A+N G IV + ++
Sbjct: 557 AKNSYGTKEEIVFLNVT 573
Score = 62.9 bits (153), Expect = 9e-10
Identities = 25/62 (40%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Query: 21 CYIIERREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPSICTTPV 80
Y IE+RE G W C ++ L G YEFRIIA N G+S+P T PV
Sbjct: 43 NYTIEKREAMGGSWSPCAK--SRYTYTTIEGLRAGKQYEFRIIAENKHGQSKPCEPTAPV 100
Query: 81 KI 82
I
Sbjct: 101 LI 102
Score = 57.2 bits (138), Expect = 5e-08
Identities = 20/92 (21%), Positives = 37/92 (40%)
Query: 183 PPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIF 242
PR P + EG + P V+ K+ R ++ ++ + +
Sbjct: 482 QPRFIVKPYGTEVGEGQSANFYCRVIASSPPVVTWHKDDRELKQSVKYMKRYNGNDYGLT 541
Query: 243 IKEIRKEDAGDYTVNLSNSSGSVSGTFTINIT 274
I ++ +D G+YTV NS G+ +N+T
Sbjct: 542 INRVKGDDKGEYTVRAKNSYGTKEEIVFLNVT 573
Score = 57.2 bits (138), Expect = 5e-08
Identities = 20/92 (21%), Positives = 37/92 (40%)
Query: 1790 PPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIF 1849
PR P + EG + P V+ K+ R ++ ++ + +
Sbjct: 482 QPRFIVKPYGTEVGEGQSANFYCRVIASSPPVVTWHKDDRELKQSVKYMKRYNGNDYGLT 541
Query: 1850 IKEIRKEDAGDYTVNLSNSSGSVSGTFTINIT 1881
I ++ +D G+YTV NS G+ +N+T
Sbjct: 542 INRVKGDDKGEYTVRAKNSYGTKEEIVFLNVT 573
Score = 54.1 bits (130), Expect = 4e-07
Identities = 18/108 (16%), Positives = 35/108 (32%), Gaps = 1/108 (0%)
Query: 1401 SSNSEPGKQSGPVIVEEQPNKPVMDLSGVRDITVKAGEDFSIHVPFMAFPQPAAFWFAND 1460
P + S ++ + V G+ + + +A P W +D
Sbjct: 461 LRKHRPQEYSIRDAFWDRSEAQPRFIVKPYGTEVGEGQSANFYCRVIASSPPVVTWHKDD 520
Query: 1461 SIIDDSDTRVHKQLTMNSASLVVKNSQRSDGGQYRLQLKNPAGFDTAT 1508
+ S + K+ N L + + D G+Y ++ KN G
Sbjct: 521 RELKQSV-KYMKRYNGNDYGLTINRVKGDDKGEYTVRAKNSYGTKEEI 567
Score = 53.7 bits (129), Expect = 6e-07
Identities = 16/109 (14%), Positives = 30/109 (27%), Gaps = 5/109 (4%)
Query: 1120 SSSSDIIMCCAPPCAPKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSP 1179
S P+ V G+ P W + E+
Sbjct: 468 EYSIRDAFWDRSEAQPRFIVKP--YGTEVGEGQSANFYCRVIASSPPVVTWHKDDRELKQ 525
Query: 1180 DGRIKFETSENQ-TIYRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYV 1227
+ + N + N+ + D G YT++ N+ G+ + V
Sbjct: 526 SVKYMKRYNGNDYGLTINRV--KGDDKGEYTVRAKNSYGTKEEIVFLNV 572
Score = 49.1 bits (117), Expect = 1e-05
Identities = 22/106 (20%), Positives = 34/106 (32%), Gaps = 17/106 (16%)
Query: 1330 TVPDPPGQPQIVDWDTNNATLMWDRPRTDGGSKIQGYKMLLKTPTGELPTTIWSKIRPTS 1389
P+PP P I + L W P DGGS + Y + + E WS +
Sbjct: 8 PEPEPPRFPIIENILDEAVILSWKPPALDGGSLVTNYTIEKR----EAMGGSWSPCAKSR 63
Query: 1390 STVY-CKDTTMNSS------------NSEPGKQSGPVIVEEQPNKP 1422
T + S+P + + PV++ K
Sbjct: 64 YTYTTIEGLRAGKQYEFRIIAENKHGQSKPCEPTAPVLIPGDERKR 109
>3l5h_A Interleukin-6 receptor subunit beta; IG-like, FNIII, cell membrane,
disulfide bond, glycoprotein, immunoglobulin domain,
membrane, phosphoprotein; HET: NAG NDG BMA FUC; 3.60A
{Homo sapiens}
Length = 589
Score = 237 bits (607), Expect = 6e-67
Identities = 81/502 (16%), Positives = 132/502 (26%), Gaps = 52/502 (10%)
Query: 898 VLDRPHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTKVSSYVT- 956
P P+NL G + W R+ TN+ ++ + + T
Sbjct: 99 SGLPPEKPKNLSCIVNEGKKMRCEWDGGRETHL--ETNFTLKSEWATHKFADCKAKRDTP 156
Query: 957 TPFVRVRNLAIGSTYEFRVMAENQYGLSKPALTIDPIKAKHPFDV-PGAPGAPK--GVDS 1013
T + E V AEN G D I + V P P +
Sbjct: 157 TSCTVDYSTVYFVNIEVWVEAENALGKVTS----DHINFDPVYKVKPNPPHNLSVINSEE 212
Query: 1014 TEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEGKSI 1073
+ L W+ P I +Y ++ R W + T +
Sbjct: 213 LSSILKLTWTNPS-IKSVIILKYNIQYRTKDASTWSQIPPEDTASTRSSFT--------- 262
Query: 1074 GSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPWSSSSDIIMCCAPPC 1133
V L EY FR+ + G+G WS S+
Sbjct: 263 ---------------------VQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYED 301
Query: 1134 APKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQTI 1193
P + T+ + + P + EV+ +
Sbjct: 302 RPSKAPSFWYKIDPSHTQGYRTVQLVWKTLPPFEANGKILDYEVTLTRWKSHLQNYTVNA 361
Query: 1194 YRNKSAKRATDSGSYTIQLVNTVG-SDSASCKVYVVDKPSPPQGPLDVSDITPESCSLSW 1252
+ T+ + N VG SD+A + D + + + W
Sbjct: 362 TKLTVNLTND-RYLATLTVRNLVGKSDAAVLTIPACDFQATHPVMDLKAFPKDNMLWVEW 420
Query: 1253 KPPLDDGGSPITNYVVEKYESATGFWSKLSSFVRSPAYDVFGLETNRQYRFRVRAENQYG 1312
P + I + V ++ + Y L ++ Y V G
Sbjct: 421 TTPRESVKKYILEWCVLSDKAPCITDWQQEDGTVHRTYLRGNLAESKCYLITVTPVYADG 480
Query: 1313 VSEPLELDNSITAKFPFTVPDPPGQPQIVDWDTNNATLMWDR-PRTDGGSKIQGYKMLLK 1371
P SI A P + N A L WD+ P I+ Y + +
Sbjct: 481 PGSP----ESIKAYLKQAPPSKGPTVRTKKVGKNEAVLEWDQLPVDVQNGFIRNYTIFYR 536
Query: 1372 TPTGELPTTIWSKIRPTSSTVY 1393
T G + +S T Y
Sbjct: 537 TIIGNE----TAVNVDSSHTEY 554
Score = 185 bits (471), Expect = 3e-49
Identities = 82/583 (14%), Positives = 144/583 (24%), Gaps = 53/583 (9%)
Query: 207 YAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDY-TVNLSNSSGSV 265
Y + N + + + + +I + +
Sbjct: 34 YFHVNANYIVWKTNHFTIPKEQYTI--INRTASSVTFTDIASLNIQLTCNILTFGQLEQN 91
Query: 266 SGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWI 325
TI P P L W+ + + L+ T++ ++ +
Sbjct: 92 VYGITIISGLPPEKPKN-LSCIVNEGKKMRCEWDGGR-ETHLE-TNFTLKSEWATHKFAD 148
Query: 326 C-ISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIP 384
C + + V A N G K KP+PP
Sbjct: 149 CKAKRDTPTSCTVDYSTVYFVNIEVWVEAENALGKVTSDHINFDPVYK---VKPNPPHNL 205
Query: 385 VVTQV--GGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPS--QINIP 440
V + L+W P I Y I + W ++ A + +
Sbjct: 206 SVINSEELSSILKLTWTNP-SIKSVIILKYNIQYRTKDASTWSQIPPEDTASTRSSFTVQ 264
Query: 441 NLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQF 500
+L +Y FR+ E G S S P +
Sbjct: 265 DLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYEDR--PSKAPSFWYKIDPSHTQGYR 322
Query: 501 QCTITGCPKPTISW--------LKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYV 552
+ P + +R + + + + L +N D Y+
Sbjct: 323 TVQLVWKTLPPFEANGKILDYEVTLTRWKSHLQNYTV----NATKLTVNLTN----DRYL 374
Query: 553 CR--AVNKGGVKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENVVV--KIPFTGYPKPKI 608
N G KS A L I P A+ + V P K +
Sbjct: 375 ATLTVRNLVG-KSDAAVLTIPACDFQATHPVMDLKAFPKDNM-LWVEWTTPRESVKKYIL 432
Query: 609 TWYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAPY-----RVVAENDLGM-DSAIV 662
W ++ + E H + A V G +
Sbjct: 433 EWCVLSDKAPCITDWQQEDGTVHRTYLRGN-----LAESKCYLITVTPVYADGPGSPESI 487
Query: 663 KIQIS-DRPDPPQFPTVEDIGHDSLALVWRA-PIWDGGSNITNYIVEKREHPMSSWIRVG 720
K + P + +G + L W P+ I NY + R +
Sbjct: 488 KAYLKQAPPSKGPTVRTKKVGKNEAVLEWDQLPVDVQNGFIRNYTIFYRTIIGNETAVNV 547
Query: 721 NTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTK 763
++ T ++ L+ Y R+ A G D + T K
Sbjct: 548 DSSHTEYTLSSLTSDTLYMVRMAAYTDEGGKDGPEFT-FTTPK 589
Score = 155 bits (392), Expect = 3e-39
Identities = 89/695 (12%), Positives = 166/695 (23%), Gaps = 171/695 (24%)
Query: 1430 RDITVKAGEDFSIH-------VPFMAFPQPAAFWFANDSIIDDSDTRVHKQLTMNSASLV 1482
V+ +F+ + + W N I + +AS V
Sbjct: 11 ESPVVQLHSNFTAVCVLKEKCMDYFHVNANYIVWKTNHFTIPKEQYTIIN----RTASSV 66
Query: 1483 VKNSQRSDGGQYRLQLKNPAGFDTATLHSRLRTLPDSVNPRCHLPSSTSKERPKFPTHPN 1542
S Q + + + S P+ P +
Sbjct: 67 TFTDIASLNIQLTCNILTFGQLEQNVYGITI----------------ISGLPPEKPKNL- 109
Query: 1543 HQPWLKWARASLTSKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMA 1602
+ + + W + + ++ +
Sbjct: 110 --------------SCIVNEGKKMRCEWDGG-RETHLET-NFTLKSEWATHK-------- 145
Query: 1603 HIPDTSLKYVLWVSEGKSIGSERGSTAQFLEREVGGAIWLKCNDYNVLECSFSV-LNLVE 1661
+ C S +V + V
Sbjct: 146 --------------------------------------FADCKAKRDTPTSCTVDYSTVY 167
Query: 1662 GNDYEFRIIAVNAIGKSEPSICTTPVKICEFVGGEKPDFIVPLKDLVVPL-GKLLTLQCE 1720
+ E + A NA+GK V P L++
Sbjct: 168 FVNIEVWVEAENALGKVTSDH-----------------INFDPVYKVKPNPPHNLSVINS 210
Query: 1721 ATGTPVPKCRW----LRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCE----- 1771
+ + K W +++ + +YR + A ++ D + +
Sbjct: 211 EELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQI---PPEDTASTRSSFTVQDLK 267
Query: 1772 ----------AYNSVGFAH---TSSRVKIGTPPRIDRMPNALYIPE-----GDNTKVKIF 1813
G + S T + + V++
Sbjct: 268 PFTEYVFRIRCMKEDGKGYWSDWSEEASGITYEDRPSKAPSFWYKIDPSHTQGYRTVQLV 327
Query: 1814 YAGDQPME---------VSLTKNGRVVQS--DDRFKFTVLDDYIIIFIKEIRKEDAGDYT 1862
+ P E V+LT+ +Q+ + K TV D T
Sbjct: 328 WKTLPPFEANGKILDYEVTLTRWKSHLQNYTVNATKLTVN-----------LTNDRYLAT 376
Query: 1863 VNLSNSSGSVSGTFTINITGLPGPPIGPLDV--SEITKHTCTLHWNPPKYDGGLKVTHYV 1920
+ + N G S + I P+ + + + W P+ + +
Sbjct: 377 LTVRNLVGK-SDAAVLTIPACDFQATHPVMDLKAFPKDNMLWVEWTTPRESVKKYILEWC 435
Query: 1921 VERRDISMPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKS 1980
V T++ L E + YL V V +G G P IKA
Sbjct: 436 VLSDKAPCITDWQQEDGTVHRTYLRGNLAESKCYLITVTPVYADGPGSP----ESIKAYL 491
Query: 1981 PYDKPSPPGIPVVTQVGGDFVNLSWDK-PLDDGGSRIQGYWIDKHEVGSDAWQRVNVAIC 2039
PS +VG + L WD+ P+D I+ Y I + + VNV
Sbjct: 492 KQAPPSKGPTVRTKKVGKNEAVLEWDQLPVDVQNGFIRNYTIFYRTIIGN-ETAVNVDSS 550
Query: 2040 APSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSAS 2074
+ +L Y R+ A + G +
Sbjct: 551 HTE-YTLSSLTSDTLYMVRMAAYTDEGGKDGPEFT 584
Score = 146 bits (369), Expect = 3e-36
Identities = 72/488 (14%), Positives = 131/488 (26%), Gaps = 80/488 (16%)
Query: 22 YIIERREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPSICTTPVK 81
+ ++ + + V + E + A NA+GK
Sbjct: 135 FTLKSEWATHKFADCKAKRDTPTSCTVDYSTVYFVNIEVWVEAENALGKVTSDH------ 188
Query: 82 ICEFVGGEKPDFIVPLKDLVVPL-GKLLTLQCEATGTPVPKCRW----LRNGREISSGAR 136
V P L++ + + K W +++ + +
Sbjct: 189 -----------INFDPVYKVKPNPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQ 237
Query: 137 YRVETAGGVFRLHFNEVTDVDNGDYTCE---------------AYNSVGFAH---TSSRV 178
YR + A ++ D + + G + S
Sbjct: 238 YRTKDASTWSQI---PPEDTASTRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEA 294
Query: 179 KIGTPPRIDRMPNALYIPE-----GDNTKVKIFYAGDQPME---------VSLTKNGRVV 224
T + + V++ + P E V+LT+ +
Sbjct: 295 SGITYEDRPSKAPSFWYKIDPSHTQGYRTVQLVWKTLPPFEANGKILDYEVTLTRWKSHL 354
Query: 225 QS--DDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPIG 282
Q+ + K TV D T+ + N G S + I
Sbjct: 355 QNYTVNATKLTVN-----------LTNDRYLATLTVRNLVGK-SDAAVLTIPACDFQATH 402
Query: 283 PLDV--SEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHDTTFIVQG 340
P+ + + + W P+ + + V T++
Sbjct: 403 PVMDLKAFPKDNMLWVEWTTPRESVKKYILEWCVLSDKAPCITDWQQEDGTVHRTYLRGN 462
Query: 341 LTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDK 400
L E + YL V V +G G P IKA PS +VG + L WD+
Sbjct: 463 LAESKCYLITVTPVYADGPGSP----ESIKAYLKQAPPSKGPTVRTKKVGKNEAVLEWDQ 518
Query: 401 -PLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAG 459
P+D I+ Y I + + VNV + +L Y R+ A + G
Sbjct: 519 LPVDVQNGFIRNYTIFYRTIIGN-ETAVNVDSSHTE-YTLSSLTSDTLYMVRMAAYTDEG 576
Query: 460 LSLPSSAS 467
+
Sbjct: 577 GKDGPEFT 584
Score = 144 bits (365), Expect = 1e-35
Identities = 69/450 (15%), Positives = 123/450 (27%), Gaps = 73/450 (16%)
Query: 890 DEMVLIFEVLDRPHPPENLHAD--EFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTV 947
D + +P+PP NL E L L WT P I Y ++ + +++
Sbjct: 187 DHINFDPVYKVKPNPPHNLSVINSEELSSILKLTWTNPSIKSV-IILKYNIQYRTKDAST 245
Query: 948 WTKVSSYVTTP---FVRVRNLAIGSTYEFRVMAENQYGLSKPALTIDPIKAKHPFDVPGA 1004
W+++ T V++L + Y FR+ + G + + D P
Sbjct: 246 WSQIPPEDTASTRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYEDRPSK 305
Query: 1005 P-----GAPKGVDSTEDSISLVWSK-PRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPD 1058
++ LVW P + I Y V
Sbjct: 306 APSFWYKIDPSHTQGYRTVQLVWKTLPPFEANGKILDYEVT------------------- 346
Query: 1059 TSLKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGP 1118
W S ++ ++T + N Y + N G+
Sbjct: 347 ----LTRWKSHLQNY---------------TVNATKLTVNLTNDRYLATLTVRNLVGKSD 387
Query: 1119 WSSSSDIIMCCAPPCAPKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPI-----WTVN 1173
+ + +M + P+ + W V
Sbjct: 388 AAVLTIPACDFQATHPVMDLKAFPKDNMLWVEWTT----------PRESVKKYILEWCVL 437
Query: 1174 GDEVSPDGRIKFETSENQTIYRNKSAKRATDSGSYTIQL--VNTVG-SDSASCKVYVVDK 1230
D+ + E Y + + Y I + V G S K Y+
Sbjct: 438 SDKAPCITDWQQEDGTVHRTYLRGNLAESKC---YLITVTPVYADGPGSPESIKAYLKQA 494
Query: 1231 PSPPQGPLDVSDITPESCSLSWK-PPLDDGGSPITNYVVEKYESATGFWSKLSSFVRSPA 1289
P + + L W P+D I NY + Y + G + ++
Sbjct: 495 PPSKGPTVRTKKVGKNEAVLEWDQLPVDVQNGFIRNYTIF-YRTIIGNETAVNVDSSHTE 553
Query: 1290 YDVFGLETNRQYRFRVRAENQYGVSEPLEL 1319
Y + L ++ Y R+ A G + E
Sbjct: 554 YTLSSLTSDTLYMVRMAAYTDEGGKDGPEF 583
Score = 131 bits (330), Expect = 2e-31
Identities = 68/578 (11%), Positives = 141/578 (24%), Gaps = 127/578 (21%)
Query: 1142 SIRDMTVLAGEEFTIT-------VPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQTIY 1194
S V FT + + +W N + + + + +
Sbjct: 9 SPESPVVQLHSNFTAVCVLKEKCMDYFHVNANYIVWKTNHFTIPKEQYTIINRTASSVTF 68
Query: 1195 RNKSAKRATDSGSYTIQLVNTVGSDSASC--KVYVVDKPSPPQGPLDVSDITPESCSLSW 1252
+ + + + T ++ + + P P+ L + W
Sbjct: 69 TDIA----SLNIQLTCNILTFGQLEQNVYGITIISGLPPEKPKN-LSCIVNEGKKMRCEW 123
Query: 1253 KPPLDDGGSPITNYVVEKYESATGFWSKLSSFVRSPA--YDVFGLETNRQYRFRVRAENQ 1310
+ TN+ + K E AT ++ + +P + V AEN
Sbjct: 124 DGGRETHL--ETNFTL-KSEWATHKFADCKAKRDTPTSCTVDYSTVYFVNIEVWVEAENA 180
Query: 1311 YGVSEPLELDNSITAKFPFTVPDPPGQPQIVDWDTNNA--TLMWDRPRTDGGSKIQGYKM 1368
G D+ P+PP +++ + ++ L W P + I Y +
Sbjct: 181 LGKVTS---DHINFDPVYKVKPNPPHNLSVINSEELSSILKLTWTNP-SIKSVIILKYNI 236
Query: 1369 LLKTPTGELPTTIWSKIRPTSST----------------VYCKDTTMNSSNSEPGKQSGP 1412
+T + I + ++ + + C S+ S
Sbjct: 237 QYRTKDASTWSQIPPEDTASTRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDW---SEE 293
Query: 1413 VIVEEQPNKPVMDLSGVRDITVKAGED-FSIHVPFMAFPQPAAFWFANDSIIDDSDTRVH 1471
++P S I + ++ + + P A D + + + H
Sbjct: 294 ASGITYEDRPSKAPSFWYKIDPSHTQGYRTVQLVWKTLPPFEANGKILDYEVTLTRWKSH 353
Query: 1472 KQ-LTMNSASLVVKNSQRSDGGQYRLQLKNPAGFDTATLHSRLRTLPDSVNPRCHLPSST 1530
Q T+N+ L V +D L ++N G S
Sbjct: 354 LQNYTVNATKLTVNL--TNDRYLATLTVRNLVG-----------------------KSDA 388
Query: 1531 SKERPKFPTHPNHQPWLKWARASLTSKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRL 1590
+ P + ++ + + W+ PR I + V
Sbjct: 389 AVLTIPACDFQATHPVMDLK--------AFPKDNMLWVEWTTPRESVKKYILEWCVLSDK 440
Query: 1591 ISDDKWIKASMAHIPDTSLKYVLWVSEGKSIGSERGSTAQFLEREVGGAIWLKCNDYNVL 1650
+ + +
Sbjct: 441 APCITDWQ----------------------------------------------QEDGTV 454
Query: 1651 ECSFSVLNLVEGNDYEFRIIAVNAIGKSEPS--ICTTP 1686
++ NL E Y + V A G P
Sbjct: 455 HRTYLRGNLAESKCYLITVTPVYADGPGSPESIKAYLK 492
Score = 130 bits (329), Expect = 3e-31
Identities = 55/405 (13%), Positives = 100/405 (24%), Gaps = 36/405 (8%)
Query: 1814 YAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDY-TVNLSNSSGSV 1872
Y + N + + + + +I + +
Sbjct: 34 YFHVNANYIVWKTNHFTIPKEQYTI--INRTASSVTFTDIASLNIQLTCNILTFGQLEQN 91
Query: 1873 SGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWI 1932
TI P P L W+ + + L+ T++ ++ +
Sbjct: 92 VYGITIISGLPPEKPKN-LSCIVNEGKKMRCEWDGGR-ETHLE-TNFTLKSEWATHKFAD 148
Query: 1933 C-ISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIP 1991
C + + V A N G K KP+PP
Sbjct: 149 CKAKRDTPTSCTVDYSTVYFVNIEVWVEAENALGKVTSDHINFDPVYK---VKPNPPHNL 205
Query: 1992 VVTQV--GGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPS--QINIP 2047
V + L+W P I Y I + W ++ A + +
Sbjct: 206 SVINSEELSSILKLTWTNP-SIKSVIILKYNIQYRTKDASTWSQIPPEDTASTRSSFTVQ 264
Query: 2048 NLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQF 2107
+L +Y FR+ E G S S P +
Sbjct: 265 DLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYED--RPSKAPSFWYKIDPSHTQGYR 322
Query: 2108 QCTITGCPKPTISW--------LKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYV 2159
+ P + +R + + + + L +N D Y+
Sbjct: 323 TVQLVWKTLPPFEANGKILDYEVTLTRWKSHLQNYTV----NATKLTVNLTN----DRYL 374
Query: 2160 CR--AVNKGGVKSTKAELIIMTAPKFNVPPRFRDTAYFESDVVVV 2202
N G KS A L I P A+ + +++ V
Sbjct: 375 ATLTVRNLVG-KSDAAVLTIPACDFQATHPVMDLKAFPKDNMLWV 418
Score = 125 bits (315), Expect = 2e-29
Identities = 73/441 (16%), Positives = 120/441 (27%), Gaps = 62/441 (14%)
Query: 90 KPDFIVPLKDLVVPLGKLLTLQC-------EATGTPVPKCRWLRNGREISSGARYRV-ET 141
P + + VV L T C + W N I + T
Sbjct: 3 DPCGYISPESPVVQLHSNFTAVCVLKEKCMDYFHVNANYIVWKTNHFTIPKEQYTIINRT 62
Query: 142 AGGVFRLHFNEVTDVDNGDYTC--EAYNSVGFAHTSSRVKIGTPPRIDRMPNALYI---- 195
A V N TC + + + G PP + + +
Sbjct: 63 ASSVTFTDIAS----LNIQLTCNILTFGQLEQNVYGITIISGLPPEKPKNLSCIVNEGKK 118
Query: 196 ------PEGDN---TKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEI 246
+ T + E + K D +D + F+
Sbjct: 119 MRCEWDGGRETHLETNFTLKS------EWATHKFADCKAKRDTPTSCTVDYSTVYFVN-- 170
Query: 247 RKEDAGDYTVNLSNSSGSVS---GTFTINITGLPGPPIGP-LDVSEITKHTCTLHWNPPK 302
+ V N+ G V+ F P PP + SE L W P
Sbjct: 171 -----IEVWVEAENALGKVTSDHINFDPVYKVKPNPPHNLSVINSEELSSILKLTWTNP- 224
Query: 303 YDGGLKVTHYVVERRDISMPHWICIS---TTCHDTTFIVQGLTEGQEYLFHVMAVNENGM 359
+ + Y ++ R W I T ++F VQ L EY+F + + E+G
Sbjct: 225 SIKSVIILKYNIQYRTKDASTWSQIPPEDTASTRSSFTVQDLKPFTEYVFRIRCMKEDGK 284
Query: 360 GPPLEGINPIKAKSPYDKPSPP-----GIPVVTQVGGDFVNLSWDK-PLDDGGSRIQGYW 413
G + + D+PS I G V L W P + +I Y
Sbjct: 285 GYWSDWSEEASGITYEDRPSKAPSFWYKIDPSHTQGYRTVQLVWKTLPPFEANGKILDYE 344
Query: 414 IDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIK 473
+ S Q V + + + +Y + +N G S + ++
Sbjct: 345 VTLTRWKSH-LQNYTV-----NATKLTVNLTNDRYLATLTVRNLVGKSDAA--VLTIPAC 396
Query: 474 DPMAAKAPEIIVPLRNANAIQ 494
D A + N +
Sbjct: 397 DFQATHPVMDLKAFPKDNMLW 417
Score = 125 bits (315), Expect = 2e-29
Identities = 73/441 (16%), Positives = 120/441 (27%), Gaps = 62/441 (14%)
Query: 1697 KPDFIVPLKDLVVPLGKLLTLQC-------EATGTPVPKCRWLRNGREISSGARYRV-ET 1748
P + + VV L T C + W N I + T
Sbjct: 3 DPCGYISPESPVVQLHSNFTAVCVLKEKCMDYFHVNANYIVWKTNHFTIPKEQYTIINRT 62
Query: 1749 AGGVFRLHFNEVTDVDNGDYTC--EAYNSVGFAHTSSRVKIGTPPRIDRMPNALYI---- 1802
A V N TC + + + G PP + + +
Sbjct: 63 ASSVTFTDIAS----LNIQLTCNILTFGQLEQNVYGITIISGLPPEKPKNLSCIVNEGKK 118
Query: 1803 ------PEGDN---TKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEI 1853
+ T + E + K D +D + F+
Sbjct: 119 MRCEWDGGRETHLETNFTLKS------EWATHKFADCKAKRDTPTSCTVDYSTVYFVN-- 170
Query: 1854 RKEDAGDYTVNLSNSSGSVS---GTFTINITGLPGPPIGP-LDVSEITKHTCTLHWNPPK 1909
+ V N+ G V+ F P PP + SE L W P
Sbjct: 171 -----IEVWVEAENALGKVTSDHINFDPVYKVKPNPPHNLSVINSEELSSILKLTWTNP- 224
Query: 1910 YDGGLKVTHYVVERRDISMPHWICIS---TTCHDTTFIVQGLTEGQEYLFHVMAVNENGM 1966
+ + Y ++ R W I T ++F VQ L EY+F + + E+G
Sbjct: 225 SIKSVIILKYNIQYRTKDASTWSQIPPEDTASTRSSFTVQDLKPFTEYVFRIRCMKEDGK 284
Query: 1967 GPPLEGINPIKAKSPYDKPSPP-----GIPVVTQVGGDFVNLSWDK-PLDDGGSRIQGYW 2020
G + + D+PS I G V L W P + +I Y
Sbjct: 285 GYWSDWSEEASGITYEDRPSKAPSFWYKIDPSHTQGYRTVQLVWKTLPPFEANGKILDYE 344
Query: 2021 IDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIK 2080
+ S Q V + + + +Y + +N G S + ++
Sbjct: 345 VTLTRWKSH-LQNYTV-----NATKLTVNLTNDRYLATLTVRNLVGKSDAA--VLTIPAC 396
Query: 2081 DPMAAKAPEIIVPLRNANAIQ 2101
D A + N +
Sbjct: 397 DFQATHPVMDLKAFPKDNMLW 417
Score = 119 bits (300), Expect = 1e-27
Identities = 33/223 (14%), Positives = 57/223 (25%), Gaps = 39/223 (17%)
Query: 902 PHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTKVSSYVTTPFVR 961
P + L + WT PR++ I + V +
Sbjct: 400 ATHPVMDLKAFPKDNMLWVEWTTPRESVKKYILEWCVLSDKAPCITDWQQEDGTVHRTYL 459
Query: 962 VRNLAIGSTYEFRVMAENQYGLSKPALTIDPIKAKHPFDVPGAPGAPKGVDSTEDSISLV 1021
NLA Y V G P + IKA P + ++ L
Sbjct: 460 RGNLAESKCYLITVTPVYADGPGSP----ESIKAYLKQAPPSKGPTVRTKKVGKNEAVLE 515
Query: 1022 WSK-PRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEGKSIGSERGST 1080
W + P I+ Y + R I ++ ++ + +Y
Sbjct: 516 WDQLPVDVQNGFIRNYTIFYRTIIGNETAV----NVDSSHTEYT---------------- 555
Query: 1081 AQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPWSSSS 1123
++SL + Y R+ A G +
Sbjct: 556 --------------LSSLTSDTLYMVRMAAYTDEGGKDGPEFT 584
Score = 100 bits (249), Expect = 2e-21
Identities = 74/614 (12%), Positives = 147/614 (23%), Gaps = 133/614 (21%)
Query: 1385 IRPTSSTVYCKDTTMNSSNSEPGKQSGPVIVEEQPNKPVMDLSGVRDITVKAGEDFSIHV 1444
I + + C + E +I P KP ++++ E +
Sbjct: 71 IASLNIQLTC--NILTFGQLEQNVYGITIISGLPPEKP-------KNLSCIVNEGKKMRC 121
Query: 1445 ----PFMAFPQPAAFWFANDSIIDDSDTRVHKQLTMNSASLVVKNSQRSDGGQYRLQLKN 1500
+ + + + ++ V ++ + ++ +N
Sbjct: 122 EWDGGRETHLETNFTLKSEWA--THKFADCKAKRDTPTSCTVDYSTVYFVNIEVWVEAEN 179
Query: 1501 PAGFDTATLHSRLRTLPDSVNPRCHLPSSTSKERPKFPTHPNHQPWLKWARASLTSKGVD 1560
G T+ + +P K +P P +L+ +
Sbjct: 180 ALGKVTSD--------HINFDP-------VYKVKPNPPH-------------NLSVINSE 211
Query: 1561 STEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEGKS 1620
+ L W+ P I +Y ++ R W + T
Sbjct: 212 ELSSILKLTWTNPS-IKSVIILKYNIQYRTKDASTWSQIPPEDTASTRS----------- 259
Query: 1621 IGSERGSTAQFLEREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEP 1680
SF+V +L +Y FRI + GK
Sbjct: 260 --------------------------------SFTVQDLKPFTEYVFRIRCMKEDGKGYW 287
Query: 1681 SICTTPVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISS 1740
S + ++P + P + +P +
Sbjct: 288 SDWSEEASG--ITYEDRPSKAPSFWYKIDPSHTQGYRTVQLVWKTLPPFEANGKILD--- 342
Query: 1741 GARYRVETAGGVFRLHFNEVTDV--------DNGDYTCEAYNSVGFAHTSSRVKIGTPPR 1792
Y V L V D T N VG + + +
Sbjct: 343 ---YEVTLTRWKSHLQNYTVNATKLTVNLTNDRYLATLTVRNLVGKSDAAVLTIPACDFQ 399
Query: 1793 IDRMPNALYI-------------PEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDR-FK 1838
L P K + + +T + + R +
Sbjct: 400 ATHPVMDLKAFPKDNMLWVEWTTPRESVKKYILEWCVLSDKAPCITDWQQEDGTVHRTYL 459
Query: 1839 FTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPIGP--LDVSEI 1896
L + I TV + G +I PP + ++
Sbjct: 460 RGNLAESKCYLI-----------TVTPVYADG-PGSPESIKAYLKQAPPSKGPTVRTKKV 507
Query: 1897 TKHTCTLHWN-PPKYDGGLKVTHYVVERRDISMPHWICISTTCHDTTFIVQGLTEGQEYL 1955
K+ L W+ P + +Y + R I + ++ T + + LT Y+
Sbjct: 508 GKNEAVLEWDQLPVDVQNGFIRNYTIFYRTII-GNETAVNVDSSHTEYTLSSLTSDTLYM 566
Query: 1956 FHVMAVNENGMGPP 1969
+ A + G
Sbjct: 567 VRMAAYTDEGGKDG 580
Score = 99.7 bits (248), Expect = 3e-21
Identities = 60/429 (13%), Positives = 109/429 (25%), Gaps = 66/429 (15%)
Query: 1709 VPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVE-------------TAGGVFRL 1755
+P K L C +C W GRE + ++
Sbjct: 101 LPPEKPKNLSCIVNEGKKMRCEWDG-GRETHLETNFTLKSEWATHKFADCKAKRDTPTSC 159
Query: 1756 HFNEVTDV-DNGDYTCEAYNSVG-------FAHTSSRVKIGTPP-----RIDRMPNALYI 1802
+ T N + EA N++G +VK P + + + L +
Sbjct: 160 TVDYSTVYFVNIEVWVEAENALGKVTSDHINFDPVYKVKPNPPHNLSVINSEELSSILKL 219
Query: 1803 -------PEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYI--IIFIKEI 1853
K I Y S + F L + + I+ +
Sbjct: 220 TWTNPSIKSVIILKYNIQYRTKDASTWSQIPPEDTASTRSSFTVQDLKPFTEYVFRIRCM 279
Query: 1854 RKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPIGPLD-------VSEITKHTCTLHWN 1906
+++ G + S+ S S P T L W
Sbjct: 280 KEDGKGYW----SDWSEEAS------GITYEDRPSKAPSFWYKIDPSHTQGYRTVQLVWK 329
Query: 1907 P-PKYDGGLKVTHYVVERRDISMPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENG 1965
P ++ K+ Y V + T + T V YL + N G
Sbjct: 330 TLPPFEANGKILDYEVTLTRWKSHLQ---NYTVNATKLTV--NLTNDRYLATLTVRNLVG 384
Query: 1966 MGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHE 2025
+ + + + P + + + + + W P + I + + +
Sbjct: 385 KSDA----AVLTIPACDFQATHPVMDLKAFPKDNMLWVEWTTPRESVKKYILEWCVLSDK 440
Query: 2026 VGSDA-WQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMA 2084
WQ+ + + NL E + Y V G P S ++ P
Sbjct: 441 APCITDWQQEDGTVH--RTYLRGNLAESKCYLITVTPVYADGPGSPESIKAYLKQAPPSK 498
Query: 2085 AKAPEIIVP 2093
Sbjct: 499 GPTVRTKKV 507
Score = 99.3 bits (247), Expect = 4e-21
Identities = 46/368 (12%), Positives = 98/368 (26%), Gaps = 39/368 (10%)
Query: 1048 WIKASMAHIPDTSLKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFR 1107
+K + Y++W + +I E+ + + F N +
Sbjct: 26 VLKEKCMDYFHVNANYIVWKTNHFTIPKEQYTIINRTASSVTFT----DIASLNIQLTCN 81
Query: 1108 VCAVNAAGQGPWSSSSDIIMCCAPPCAPKITSDLSIRDMTVLAGEEFTITV----PFSGR 1163
+ Q + I+ PP P ++++ + E +
Sbjct: 82 ILTFGQLEQ---NVYGITIISGLPPEKP--------KNLSCIVNEGKKMRCEWDGGRETH 130
Query: 1164 PKPTPIWTVNGDEVSPDGRIKFETSENQTIYRNKSAKRATDSGSYTIQLVNTVG---SDS 1220
+ K + + + S + ++ N +G SD
Sbjct: 131 LETNFTLKSEWAT-HKFADCKAKRDTPTSCTVDYSTVYFV-NIEVWVEAENALGKVTSDH 188
Query: 1221 ASCKVYVVDKPSPPQGP-LDVSDITPESCSLSWKPPLDDGGSPITNYVVEKYESATGFWS 1279
+ KP+PP + S+ L+W P I Y ++ WS
Sbjct: 189 INFDPVYKVKPNPPHNLSVINSEELSSILKLTWTNP-SIKSVIILKYNIQYRTKDASTWS 247
Query: 1280 KLSSFVRSPA---YDVFGLETNRQYRFRVRAENQYGVSEPLELDNSITAKFPFTVPDPP- 1335
++ + + V L+ +Y FR+R + G + + P
Sbjct: 248 QIPPEDTASTRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYEDRPSKAP 307
Query: 1336 ----GQPQIVDWDTNNATLMWD-RPRTDGGSKIQGYKMLLKTPTGELPTTIWSKIRPTSS 1390
L+W P + KI Y++ L + + + +
Sbjct: 308 SFWYKIDPSHTQGYRTVQLVWKTLPPFEANGKILDYEVTLT----RWKSHLQNYTVNATK 363
Query: 1391 TVYCKDTT 1398
Sbjct: 364 LTVNLTND 371
Score = 87.8 bits (217), Expect = 1e-17
Identities = 21/178 (11%), Positives = 50/178 (28%), Gaps = 14/178 (7%)
Query: 590 KGENVVVK-------IPFTGYPKPKITWYRDNEVIESGGHFHVETSERHAILTIRDASNV 642
N + + I W ++ I + + + + +T D +++
Sbjct: 17 LHSNFTAVCVLKEKCMDYFHVNANYIVWKTNHFTIPKEQYTIINRTA--SSVTFTDIASL 74
Query: 643 DTA-PYRVVAENDLGMDSAIVKIQISDRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNI 701
+ ++ L + + I P+ P+ + + W
Sbjct: 75 NIQLTCNILTFGQLEQNVYGITIISGLPPEKPKNLSCIVNEGKKMRCEWDGGRETHL--E 132
Query: 702 TNYIVEKRE--HPMSSWIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTS 757
TN+ ++ H + +T + E V AEN G+ +
Sbjct: 133 TNFTLKSEWATHKFADCKAKRDTPTSCTVDYSTVYFVNIEVWVEAENALGKVTSDHIN 190
Score = 41.5 bits (97), Expect = 0.004
Identities = 15/131 (11%), Positives = 30/131 (22%), Gaps = 50/131 (38%)
Query: 1559 VDSTEDSISLVWSK-PRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSE 1617
++ L W + P I+ Y + R I ++
Sbjct: 505 KKVGKNEAVLEWDQLPVDVQNGFIRNYTIFYRTIIGNETAV------------------- 545
Query: 1618 GKSIGSERGSTAQFLEREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGK 1677
+ + +++ +L Y R+ A G
Sbjct: 546 ----------------------------NVDSSHTEYTLSSLTSDTLYMVRMAAYTDEGG 577
Query: 1678 SEPSIC--TTP 1686
+ TTP
Sbjct: 578 KDGPEFTFTTP 588
Score = 40.4 bits (94), Expect = 0.008
Identities = 12/60 (20%), Positives = 21/60 (35%), Gaps = 4/60 (6%)
Query: 22 YIIERREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPSIC--TTP 79
Y I R + G + + +++ +L Y R+ A G + TTP
Sbjct: 531 YTIFYRTIIGNETAV--NVDSSHTEYTLSSLTSDTLYMVRMAAYTDEGGKDGPEFTFTTP 588
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI
cardiomyopathy, disease mutation, disulfide bond,
immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Length = 197
Score = 208 bits (532), Expect = 1e-61
Identities = 47/195 (24%), Positives = 95/195 (48%), Gaps = 1/195 (0%)
Query: 476 MAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDT 535
M+ +AP I +++ AQ C I G P P I W + +E+ S ++ + ++G T
Sbjct: 3 MSGEAPGIRKEMKDVTTKLGEAAQLSCQIVGRPLPDIKWYRFGKELIQSRKYKMSSDGRT 62
Query: 536 YTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENVV 595
+TL + + D Y C A N+ G T ++L++ P+F+ ++ Y G +
Sbjct: 63 HTLTVMTEEQEDEGVYTCIATNEVGEVETSSKLLLQATPQFHPGYPLKEKYYGAVGSTLR 122
Query: 596 VKIPFTGYPKPKITWYRDNEVIESGGHFHVETSERHAILTIRDASN-VDTAPYRVVAEND 654
+ + + G P P +TW+ +++++ + +E +E + L +++ Y+V N
Sbjct: 123 LHVMYIGRPVPAMTWFHGQKLLQNSENITIENTEHYTHLVMKNVQRKTHAGKYKVQLSNV 182
Query: 655 LGMDSAIVKIQISDR 669
G AI+ ++I D+
Sbjct: 183 FGTVDAILDVEIQDK 197
Score = 164 bits (417), Expect = 4e-46
Identities = 51/193 (26%), Positives = 85/193 (44%), Gaps = 4/193 (2%)
Query: 86 VGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGV 145
+ GE P +KD+ LG+ L C+ G P+P +W R G+E+ +Y++ + G
Sbjct: 3 MSGEAPGIRKEMKDVTTKLGEAAQLSCQIVGRPLPDIKWYRFGKELIQSRKYKMSSDGRT 62
Query: 146 FRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRI---DRMPNALYIPEGDNTK 202
L D G YTC A N VG TSS++ + P+ + Y G +
Sbjct: 63 HTLTVMTEEQEDEGVYTCIATNEVGEVETSSKLLLQATPQFHPGYPLKEKYYGAVGSTLR 122
Query: 203 VKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEI-RKEDAGDYTVNLSNS 261
+ + Y G ++ +++Q+ + + Y + +K + RK AG Y V LSN
Sbjct: 123 LHVMYIGRPVPAMTWFHGQKLLQNSENITIENTEHYTHLVMKNVQRKTHAGKYKVQLSNV 182
Query: 262 SGSVSGTFTINIT 274
G+V + I
Sbjct: 183 FGTVDAILDVEIQ 195
Score = 164 bits (417), Expect = 4e-46
Identities = 51/193 (26%), Positives = 85/193 (44%), Gaps = 4/193 (2%)
Query: 1693 VGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGV 1752
+ GE P +KD+ LG+ L C+ G P+P +W R G+E+ +Y++ + G
Sbjct: 3 MSGEAPGIRKEMKDVTTKLGEAAQLSCQIVGRPLPDIKWYRFGKELIQSRKYKMSSDGRT 62
Query: 1753 FRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRI---DRMPNALYIPEGDNTK 1809
L D G YTC A N VG TSS++ + P+ + Y G +
Sbjct: 63 HTLTVMTEEQEDEGVYTCIATNEVGEVETSSKLLLQATPQFHPGYPLKEKYYGAVGSTLR 122
Query: 1810 VKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEI-RKEDAGDYTVNLSNS 1868
+ + Y G ++ +++Q+ + + Y + +K + RK AG Y V LSN
Sbjct: 123 LHVMYIGRPVPAMTWFHGQKLLQNSENITIENTEHYTHLVMKNVQRKTHAGKYKVQLSNV 182
Query: 1869 SGSVSGTFTINIT 1881
G+V + I
Sbjct: 183 FGTVDAILDVEIQ 195
Score = 126 bits (319), Expect = 5e-33
Identities = 30/123 (24%), Positives = 57/123 (46%), Gaps = 1/123 (0%)
Query: 2083 MAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDT 2142
M+ +AP I +++ AQ C I G P P I W + +E+ S ++ + ++G T
Sbjct: 3 MSGEAPGIRKEMKDVTTKLGEAAQLSCQIVGRPLPDIKWYRFGKELIQSRKYKMSSDGRT 62
Query: 2143 YTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPRFRDTAYF-ESDVVV 2201
+TL + + D Y C A N+ G T ++L++ P+F+ ++ Y +
Sbjct: 63 HTLTVMTEEQEDEGVYTCIATNEVGEVETSSKLLLQATPQFHPGYPLKEKYYGAVGSTLR 122
Query: 2202 VVC 2204
+
Sbjct: 123 LHV 125
Score = 94.0 bits (234), Expect = 1e-21
Identities = 20/126 (15%), Positives = 36/126 (28%), Gaps = 12/126 (9%)
Query: 2056 EFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLR---NANAIQNHNAQFQCTIT 2112
+ A NE G S+ + ++ P+ +
Sbjct: 77 VYTCIATNEVGEV---ETSSKLLLQAT-----PQFHPGYPLKEKYYGAVGSTLRLHVMYI 128
Query: 2113 GCPKPTISWLKGSREITPSARHHIFAEGDTYTL-IINSVYGVDADEYVCRAVNKGGVKST 2171
G P P ++W G + + S I L + N A +Y + N G
Sbjct: 129 GRPVPAMTWFHGQKLLQNSENITIENTEHYTHLVMKNVQRKTHAGKYKVQLSNVFGTVDA 188
Query: 2172 KAELII 2177
++ I
Sbjct: 189 ILDVEI 194
Score = 87.4 bits (217), Expect = 2e-19
Identities = 32/128 (25%), Positives = 48/128 (37%), Gaps = 7/128 (5%)
Query: 1103 EYEFRVCAVNAAGQGPWSSSSDIIMCCAPPCAPKITSDLSIRDMTVLAGEEFTITVPFSG 1162
Y A N G+ +SS +++ P P G + V + G
Sbjct: 77 VYTCI--ATNEVGEV--ETSSKLLLQATPQFHPGYPLK---EKYYGAVGSTLRLHVMYIG 129
Query: 1163 RPKPTPIWTVNGDEVSPDGRIKFETSENQTIYRNKSAKRATDSGSYTIQLVNTVGSDSAS 1222
RP P W + I E +E+ T K+ +R T +G Y +QL N G+ A
Sbjct: 130 RPVPAMTWFHGQKLLQNSENITIENTEHYTHLVMKNVQRKTHAGKYKVQLSNVFGTVDAI 189
Query: 1223 CKVYVVDK 1230
V + DK
Sbjct: 190 LDVEIQDK 197
Score = 75.1 bits (185), Expect = 4e-15
Identities = 21/108 (19%), Positives = 37/108 (34%), Gaps = 3/108 (2%)
Query: 573 APKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSERHA 632
AP + GE + G P P I WYR + + + + + R
Sbjct: 7 APGIRKEMK---DVTTKLGEAAQLSCQIVGRPLPDIKWYRFGKELIQSRKYKMSSDGRTH 63
Query: 633 ILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQISDRPDPPQFPTVED 680
LT+ D Y +A N++G K+ + P +++
Sbjct: 64 TLTVMTEEQEDEGVYTCIATNEVGEVETSSKLLLQATPQFHPGYPLKE 111
Score = 73.2 bits (180), Expect = 2e-14
Identities = 26/111 (23%), Positives = 39/111 (35%), Gaps = 3/111 (2%)
Query: 1134 APKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQTI 1193
AP I ++ +D+T GE ++ GRP P W G E+ + K +
Sbjct: 7 APGIRKEM--KDVTTKLGEAAQLSCQIVGRPLPDIKWYRFGKELIQSRKYKMSSDGRTHT 64
Query: 1194 YRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYVVDKPSPPQGPLDVSDIT 1244
+ + D G YT N VG S K+ + P G
Sbjct: 65 LTVMTEE-QEDEGVYTCIATNEVGEVETSSKLLLQATPQFHPGYPLKEKYY 114
Score = 63.2 bits (154), Expect = 5e-11
Identities = 26/102 (25%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 1410 SGPVIVEEQPNKPVMDLSGVRDITVKAGEDFSIHVPFMAFPQPAAFWFANDSIIDDSDTR 1469
S ++++ P + G +HV ++ P PA WF ++ +S+
Sbjct: 92 SSKLLLQATP-QFHPGYPLKEKYYGAVGSTLRLHVMYIGRPVPAMTWFHGQKLLQNSE-N 149
Query: 1470 VHKQLTMNSASLVVKNSQR-SDGGQYRLQLKNPAGFDTATLH 1510
+ + T + LV+KN QR + G+Y++QL N G A L
Sbjct: 150 ITIENTEHYTHLVMKNVQRKTHAGKYKVQLSNVFGTVDAILD 191
Score = 57.0 bits (138), Expect = 6e-09
Identities = 17/110 (15%), Positives = 38/110 (34%)
Query: 181 GTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYII 240
G P I + + G+ ++ G ++ + G+ + ++K +
Sbjct: 5 GEAPGIRKEMKDVTTKLGEAAQLSCQIVGRPLPDIKWYRFGKELIQSRKYKMSSDGRTHT 64
Query: 241 IFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPIGPLDVSEIT 290
+ + +ED G YT +N G V + + + P G +
Sbjct: 65 LTVMTEEQEDEGVYTCIATNEVGEVETSSKLLLQATPQFHPGYPLKEKYY 114
Score = 57.0 bits (138), Expect = 6e-09
Identities = 17/110 (15%), Positives = 38/110 (34%)
Query: 1788 GTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYII 1847
G P I + + G+ ++ G ++ + G+ + ++K +
Sbjct: 5 GEAPGIRKEMKDVTTKLGEAAQLSCQIVGRPLPDIKWYRFGKELIQSRKYKMSSDGRTHT 64
Query: 1848 IFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPIGPLDVSEIT 1897
+ + +ED G YT +N G V + + + P G +
Sbjct: 65 LTVMTEEQEDEGVYTCIATNEVGEVETSSKLLLQATPQFHPGYPLKEKYY 114
Score = 43.9 bits (104), Expect = 2e-04
Identities = 16/79 (20%), Positives = 28/79 (35%), Gaps = 1/79 (1%)
Query: 1430 RDITVKAGEDFSIHVPFMAFPQPAAFWFANDSIIDDSDTRVHKQLTMNSASLVVKNSQRS 1489
+D+T K GE + + P P W+ + S + + +L V ++
Sbjct: 15 KDVTTKLGEAAQLSCQIVGRPLPDIKWYRFGKELIQSR-KYKMSSDGRTHTLTVMTEEQE 73
Query: 1490 DGGQYRLQLKNPAGFDTAT 1508
D G Y N G +
Sbjct: 74 DEGVYTCIATNEVGEVETS 92
>3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural
protein; 1.65A {Homo sapiens}
Length = 197
Score = 206 bits (525), Expect = 7e-61
Identities = 81/198 (40%), Positives = 112/198 (56%), Gaps = 6/198 (3%)
Query: 277 PGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHDTTF 336
PGPP V E+TK + TL W+PP DGG K+ +Y+VE+R+ + + ++T CH T++
Sbjct: 6 PGPPQDLK-VKEVTKTSVTLTWDPPLLDGGSKIKNYIVEKRESTRKAYSTVATNCHKTSW 64
Query: 337 IVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNL 396
V L EG Y F V+A NE G+G P E ++ ++P PPG + V + V+L
Sbjct: 65 KVDQLQEGCSYYFRVLAENEYGIGLPAE---TAESVKASERPLPPGKITLMDVTRNSVSL 121
Query: 397 SWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQN 456
SW+KP DGGSRI GY ++ GSD W ++ I LI+G +Y FRV AQN
Sbjct: 122 SWEKPEHDGGSRILGYIVEMQTKGSDKWATCAT--VKVTEATITGLIQGEEYSFRVSAQN 179
Query: 457 EAGLSLPSSASNSVQIKD 474
E G+S P S V KD
Sbjct: 180 EKGISDPRQLSVPVIAKD 197
Score = 206 bits (525), Expect = 7e-61
Identities = 81/198 (40%), Positives = 112/198 (56%), Gaps = 6/198 (3%)
Query: 1884 PGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHDTTF 1943
PGPP V E+TK + TL W+PP DGG K+ +Y+VE+R+ + + ++T CH T++
Sbjct: 6 PGPPQDLK-VKEVTKTSVTLTWDPPLLDGGSKIKNYIVEKRESTRKAYSTVATNCHKTSW 64
Query: 1944 IVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNL 2003
V L EG Y F V+A NE G+G P E ++ ++P PPG + V + V+L
Sbjct: 65 KVDQLQEGCSYYFRVLAENEYGIGLPAE---TAESVKASERPLPPGKITLMDVTRNSVSL 121
Query: 2004 SWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQN 2063
SW+KP DGGSRI GY ++ GSD W ++ I LI+G +Y FRV AQN
Sbjct: 122 SWEKPEHDGGSRILGYIVEMQTKGSDKWATCAT--VKVTEATITGLIQGEEYSFRVSAQN 179
Query: 2064 EAGLSLPSSASNSVQIKD 2081
E G+S P S V KD
Sbjct: 180 EKGISDPRQLSVPVIAKD 197
Score = 199 bits (509), Expect = 1e-58
Identities = 76/229 (33%), Positives = 105/229 (45%), Gaps = 37/229 (16%)
Query: 898 VLDRPHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTKVSSYVTT 957
+D P PP++L E S+TL W PP +GGS+I NY+VEK++ ++ V++
Sbjct: 2 AMDTPGPPQDLKVKEVTKTSVTLTWDPPLLDGGSKIKNYIVEKRESTRKAYSTVATNCHK 61
Query: 958 PFVRVRNLAIGSTYEFRVMAENQYGLSKPALTIDPIKAKHPFDVPGAPGAPKGVDSTEDS 1017
+V L G +Y FRV+AEN+YG+ PA T + +K + P PG +D T +S
Sbjct: 62 TSWKVDQLQEGCSYYFRVLAENEYGIGLPAETAESVK---ASERPLPPGKITLMDVTRNS 118
Query: 1018 ISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEGKSIGSER 1077
+SL W KP HDGGS I YIVE + DKW A + T
Sbjct: 119 VSLSWEKPEHDGGSRILGYIVEMQTKGSDKWATC--ATVKVTEA---------------- 160
Query: 1078 GSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPWSSSSDII 1126
+T LI+ EY FRV A N G S +
Sbjct: 161 ----------------TITGLIQGEEYSFRVSAQNEKGISDPRQLSVPV 193
Score = 160 bits (406), Expect = 1e-44
Identities = 63/204 (30%), Positives = 97/204 (47%), Gaps = 21/204 (10%)
Query: 1227 VVDKPSPPQGPLDVSDITPESCSLSWKPPLDDGGSPITNYVVEKYESATGFWSKLSSFVR 1286
+D P PPQ V ++T S +L+W PPL DGGS I NY+VEK ES +S +++
Sbjct: 2 AMDTPGPPQDLK-VKEVTKTSVTLTWDPPLLDGGSKIKNYIVEKRESTRKAYSTVATNCH 60
Query: 1287 SPAYDVFGLETNRQYRFRVRAENQYGVSEPLELDNSITAKFPFTVPDPPGQPQIVDWDTN 1346
++ V L+ Y FRV AEN+YG+ P E + + P PPG+ ++D N
Sbjct: 61 KTSWKVDQLQEGCSYYFRVLAENEYGIGLPAE---TAESVKASERPLPPGKITLMDVTRN 117
Query: 1347 NATLMWDRPRTDGGSKIQGYKMLLKTPTGELPTTIWSKIRPTSSTVY-CKDTTMNSS--- 1402
+ +L W++P DGGS+I GY + ++ + W+ T
Sbjct: 118 SVSLSWEKPEHDGGSRILGYIVEMQ----TKGSDKWATCATVKVTEATITGLIQGEEYSF 173
Query: 1403 ---------NSEPGKQSGPVIVEE 1417
S+P + S PVI ++
Sbjct: 174 RVSAQNEKGISDPRQLSVPVIAKD 197
Score = 124 bits (313), Expect = 3e-32
Identities = 46/121 (38%), Positives = 63/121 (52%), Gaps = 3/121 (2%)
Query: 647 YRVVAENDLGM---DSAIVKIQISDRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITN 703
+RV+AEN+ G+ ++ S+RP PP T+ D+ +S++L W P DGGS I
Sbjct: 77 FRVLAENEYGIGLPAETAESVKASERPLPPGKITLMDVTRNSVSLSWEKPEHDGGSRILG 136
Query: 704 YIVEKREHPMSSWIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTK 763
YIVE + W + T ITGL G +Y FRV A+N G SDP S + K
Sbjct: 137 YIVEMQTKGSDKWATCATVKVTEATITGLIQGEEYSFRVSAQNEKGISDPRQLSVPVIAK 196
Query: 764 D 764
D
Sbjct: 197 D 197
Score = 113 bits (286), Expect = 1e-28
Identities = 38/98 (38%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Query: 668 DRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSWIRVGNTRFTTM 727
D P PPQ V+++ S+ L W P+ DGGS I NYIVEKRE ++ V T
Sbjct: 4 DTPGPPQDLKVKEVTKTSVTLTWDPPLLDGGSKIKNYIVEKRESTRKAYSTVATNCHKTS 63
Query: 728 A-ITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKD 764
+ L G Y FRV AEN YG P+ T++ + +
Sbjct: 64 WKVDQLQEGCSYYFRVLAENEYGIGLPAETAESVKASE 101
Score = 108 bits (273), Expect = 8e-27
Identities = 38/100 (38%), Positives = 52/100 (52%), Gaps = 1/100 (1%)
Query: 376 DKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPS 435
D P PP V +V V L+WD PL DGGS+I+ Y ++K E A+ V S
Sbjct: 4 DTPGPPQDLKVKEVTKTSVTLTWDPPLLDGGSKIKNYIVEKRESTRKAYSTVATNCHKTS 63
Query: 436 QINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDP 475
+ L EG Y FRV A+NE G+ LP+ + SV+ +
Sbjct: 64 -WKVDQLQEGCSYYFRVLAENEYGIGLPAETAESVKASER 102
Score = 108 bits (273), Expect = 8e-27
Identities = 38/100 (38%), Positives = 52/100 (52%), Gaps = 1/100 (1%)
Query: 1983 DKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPS 2042
D P PP V +V V L+WD PL DGGS+I+ Y ++K E A+ V S
Sbjct: 4 DTPGPPQDLKVKEVTKTSVTLTWDPPLLDGGSKIKNYIVEKRESTRKAYSTVATNCHKTS 63
Query: 2043 QINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDP 2082
+ L EG Y FRV A+NE G+ LP+ + SV+ +
Sbjct: 64 -WKVDQLQEGCSYYFRVLAENEYGIGLPAETAESVKASER 102
Score = 103 bits (259), Expect = 6e-25
Identities = 39/148 (26%), Positives = 57/148 (38%), Gaps = 36/148 (24%)
Query: 1000 DVPGAPGAPKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDT 1059
D PG P K + T+ S++L W P DGGS I+ YIVEKR + + + + T
Sbjct: 4 DTPGPPQDLKVKEVTKTSVTLTWDPPLLDGGSKIKNYIVEKRESTRKAYSTVA-TNCHKT 62
Query: 1060 SLKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPW 1119
S K V L E Y FRV A N G G
Sbjct: 63 SWK--------------------------------VDQLQEGCSYYFRVLAENEYGIGLP 90
Query: 1120 SSSSDIIMCCAPPCAPKITSDLSIRDMT 1147
+ +++ + P P +++ D+T
Sbjct: 91 AETAESVKASERPLPP---GKITLMDVT 115
Score = 101 bits (253), Expect = 4e-24
Identities = 38/117 (32%), Positives = 58/117 (49%), Gaps = 5/117 (4%)
Query: 1213 VNTVGSDSASCKVYVV---DKPSPPQGPLDVSDITPESCSLSWKPPLDDGGSPITNYVVE 1269
N G + V ++P PP + D+T S SLSW+ P DGGS I Y+VE
Sbjct: 82 ENEYGIGLPAETAESVKASERPLPPGKIT-LMDVTRNSVSLSWEKPEHDGGSRILGYIVE 140
Query: 1270 KYESATGFWSKLSSFVRSPAYDVFGLETNRQYRFRVRAENQYGVSEPLELDNSITAK 1326
+ W+ ++ V+ + GL +Y FRV A+N+ G+S+P +L + AK
Sbjct: 141 MQTKGSDKWATCAT-VKVTEATITGLIQGEEYSFRVSAQNEKGISDPRQLSVPVIAK 196
Score = 100 bits (252), Expect = 5e-24
Identities = 33/106 (31%), Positives = 50/106 (47%), Gaps = 1/106 (0%)
Query: 891 EMVLIFEVLDRPHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTK 950
E + +RP PP + + +S++L W P +GGS I Y+VE + S W
Sbjct: 92 ETAESVKASERPLPPGKITLMDVTRNSVSLSWEKPEHDGGSRILGYIVEMQTKGSDKWAT 151
Query: 951 VSSYVTTPFVRVRNLAIGSTYEFRVMAENQYGLSKPALTIDPIKAK 996
++ T + L G Y FRV A+N+ G+S P P+ AK
Sbjct: 152 CATVKVTEAT-ITGLIQGEEYSFRVSAQNEKGISDPRQLSVPVIAK 196
Score = 73.1 bits (180), Expect = 2e-14
Identities = 29/123 (23%), Positives = 42/123 (34%), Gaps = 46/123 (37%)
Query: 1559 VDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEG 1618
+ T+ S++L W P DGGS I+ YIVEKR + + +
Sbjct: 15 KEVTKTSVTLTWDPPLLDGGSKIKNYIVEKRESTRKAYSTVA------------------ 56
Query: 1619 KSIGSERGSTAQFLEREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKS 1678
N + S+ V L EG Y FR++A N G
Sbjct: 57 ----------------------------TNCHKTSWKVDQLQEGCSYYFRVLAENEYGIG 88
Query: 1679 EPS 1681
P+
Sbjct: 89 LPA 91
Score = 71.2 bits (175), Expect = 1e-13
Identities = 34/133 (25%), Positives = 46/133 (34%), Gaps = 47/133 (35%)
Query: 1557 KGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVS 1616
+D T +S+SL W KP HDGGS I YIVE + DKW
Sbjct: 110 TLMDVTRNSVSLSWEKPEHDGGSRILGYIVEMQTKGSDKWATC----------------- 152
Query: 1617 EGKSIGSERGSTAQFLEREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIG 1676
V ++ L++G +Y FR+ A N G
Sbjct: 153 ------------------------------ATVKVTEATITGLIQGEEYSFRVSAQNEKG 182
Query: 1677 KSEPSICTTPVKI 1689
S+P + PV
Sbjct: 183 ISDPRQLSVPVIA 195
Score = 63.1 bits (154), Expect = 6e-11
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Query: 22 YIIERREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPS 74
YI+E+RE + N + S+ V L EG Y FR++A N G P+
Sbjct: 40 YIVEKRESTRKAYSTVA-TNCHKTSWKVDQLQEGCSYYFRVLAENEYGIGLPA 91
Score = 62.7 bits (153), Expect = 6e-11
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Query: 22 YIIERREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPSICTTPVK 81
YI+E + G W C V E + + L++G +Y FR+ A N G S+P + PV
Sbjct: 137 YIVEMQTKGSDKWATCATVKVTEATIT--GLIQGEEYSFRVSAQNEKGISDPRQLSVPVI 194
Query: 82 I 82
Sbjct: 195 A 195
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal
eight IG domains...; immunoglobulin domain; HET: NAG NDG;
4.19A {Drosophila melanogaster}
Length = 816
Score = 214 bits (546), Expect = 2e-57
Identities = 131/858 (15%), Positives = 244/858 (28%), Gaps = 151/858 (17%)
Query: 1401 SSNSEPGKQSGPVIVEEQPNKPVMDLSGVRDITVKAGEDFSIHVPFMAFPQPAAFWFAND 1460
++N Q GPV ++E N I I P P W +D
Sbjct: 28 AANPPDADQKGPVFLKEPTN----------RIDFSNSTGAEIECKASGNPMPEIIWIRSD 77
Query: 1461 SIIDDSDTRVHKQLTMNSASLVVKN------SQRSDGGQYRLQLKNPAGFDTATLHSRLR 1514
+ + + LV Q Y +N G +
Sbjct: 78 GTAVGDVPGLRQIS--SDGKLVFPPFRAEDYRQEVHAQVYACLARNQFGSIISRDVHVRA 135
Query: 1515 TLPDSVNP---------------RCHLPSSTSKERPKFPTHPNHQPWLKWARASLTSKGV 1559
+ +C +PS + + W +
Sbjct: 136 VVAQYYEADVNKEHVIRGNSAVIKCLIPSFV----------ADFVEVVSWHTDEEENYFP 185
Query: 1560 DSTEDS-----------ISLVWSKPRHDGGS----------PIQRYIVEKRLISDDKWIK 1598
+ D I V P S R K + + I
Sbjct: 186 GAEYDGKYLVLPSGELHIREV--GPEDGYKSYQCRTKHRLTGETRLSATKGRLVITEPIS 243
Query: 1599 ASMAHIPDTSLKYVLWVSEGKSIGSERGSTAQFLEREVGGA-----IWLKCNDYNVLECS 1653
+++ + + + S ++ L G W K + + +
Sbjct: 244 SAVPKVVSLAKFDMKTYSGSSTM---------ALLCPAQGYPVPVFRWYKFIEGTTRKQA 294
Query: 1654 FSVLNLVEGNDYEFRI-------------IAVNAIGKSEPSICTTPVKICEFVGGEKPDF 1700
+ + V+ I + N++G T V
Sbjct: 295 VVLNDRVKQVSGTLIIKDAVVEDSGKYLCVVNNSVGGESVETVLT-VT-------APLSA 346
Query: 1701 IVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEV 1760
+ V G+ C+ TG P+ W+++G+ I L V
Sbjct: 347 KIDPPTQTVDFGRPAVFTCQYTGNPIKTVSWMKDGKAIGHSESV----------LRIESV 396
Query: 1761 TDVDNGDYTCEAYNSVGFAHTSSRVKIG---TPPRIDRMPNALYIPEGDNTKVKIFYAGD 1817
D G Y C N A S+ +K+G PP I + + G + +K G+
Sbjct: 397 KKEDKGMYQCFVRNDRESAEASAELKLGGRFDPPVIRQAFQEETMEPGPSVFLKCVAGGN 456
Query: 1818 QPMEVSLTKNGRVVQSDDRFKFTVL-----DDYIIIFIKEIRKEDAGDYTVNLSNSSGSV 1872
E+S +G+ + ++DR++ D + I + D G Y + G
Sbjct: 457 PTPEISWELDGKKIANNDRYQVGQYVTVNGDVVSYLNITSVHANDGGLYKCIAKSKVGVA 516
Query: 1873 SGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVV-----ERRDIS 1927
+ +N+ GLP + + T + V Y + ER + +
Sbjct: 517 EHSAKLNVYGLP-YIRQMEKKAIVAGETLIVT---------CPVAGYPIDSIVWERDNRA 566
Query: 1928 MPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSP 1987
+P + T I + + +A N+ G + +
Sbjct: 567 LPINRKQKVFPNGTLIIENVERNSDQATYTCVAKNQEGYSARGSLEVQVMVLPRIIPFAF 626
Query: 1988 PGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWI-DKHEVGSDAWQRVNVAICAPSQINI 2046
P G ++ L P D I W D + D + S + I
Sbjct: 627 EEGPAQV---GQYLTLHCSVPGGDLPLNID--WTLDGQAISEDLGITTSRVGRRGSVLTI 681
Query: 2047 PNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQ 2106
+ F +A+N AG + + + P P I+ + Q +A+
Sbjct: 682 EAVEASHAGNFTCHARNLAG---HQQFTTPLNVYVP-----PRWILEPTDKAFAQGSDAK 733
Query: 2107 FQCTITGCPKPTISWLKGSREITPSARHHIFAEG---DTYTLIINSVYGVDADEYVCRAV 2163
+C G PKP ++W K + + ++ + TL ++++ + Y+C A+
Sbjct: 734 VECKADGFPKPQVTWKKAVGDTPGEYKDLKKSDNIRVEEGTLHVDNIQKTNEGYYLCEAI 793
Query: 2164 NKGGVKSTKAELIIMTAP 2181
N G + +I + A
Sbjct: 794 NGIGSGLSAVIMISVQAH 811
Score = 210 bits (537), Expect = 4e-56
Identities = 125/762 (16%), Positives = 222/762 (29%), Gaps = 127/762 (16%)
Query: 59 EFRIIAVNAIGKSEPSICTTPVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEA---T 115
+ +A N G SI + V + + + V G ++C
Sbjct: 114 VYACLARNQFG----SIISRDVHV---RAVVAQYYEADVNKEHVIRGNSAVIKCLIPSFV 166
Query: 116 GTPVPKCRWLRNGREI-----SSGARYRVETAGGVFRLHFNEVTDVD-NGDYTCEAYNSV 169
V W + E +Y V +G LH EV D Y C + +
Sbjct: 167 ADFVEVVSWHTDEEENYFPGAEYDGKYLVLPSG---ELHIREVGPEDGYKSYQCRTKHRL 223
Query: 170 GFAHTSS---RVKIGTPPRIDRMP--------NALYIPEGDNTKVKIFYAGDQPMEVSLT 218
S + T P +P + + G
Sbjct: 224 TGETRLSATKGRLVITEPISSAVPKVVSLAKFDMKTYSGSSTMALLCPAQGYPVPVFRWY 283
Query: 219 KNGRVVQSDDRFKFT--VLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGL 276
K V + IK+ ED+G Y ++NS G S + +T
Sbjct: 284 KFIEGTTRKQAVVLNDRVKQVSGTLIIKDAVVEDSGKYLCVVNNSVGGESVETVLTVTAP 343
Query: 277 PGPPIGP----LDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCH 332
I P +D TC NP K V+ + ++ H
Sbjct: 344 LSAKIDPPTQTVDFGRPAVFTCQYTGNPIK-----TVSWM---KDGKAIGH--------S 387
Query: 333 DTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPS--PPGIPVVTQVG 390
++ ++ + + + ++ N+ E +K +D P + G
Sbjct: 388 ESVLRIESVKKEDKGMYQCFVRNDRES---AEASAELKLGGRFDPPVIRQAFQEETMEPG 444
Query: 391 GDFV-----------NLSW---DKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQ 436
+SW K + + G Q V V S
Sbjct: 445 PSVFLKCVAGGNPTPEISWELDGKKIANNDRYQVG-------------QYVTVNGDVVSY 491
Query: 437 INIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNH 496
+NI ++ ++ A+++ G A +S ++ I + +
Sbjct: 492 LNITSVHANDGGLYKCIAKSKVG-----VAEHSAKLN----VYGLPYIRQMEKKAIVAGE 542
Query: 497 NAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVY-GVDADEYVCRA 555
C + G P +I W + +R + + + +F G TLII +V D Y C A
Sbjct: 543 TLIVTCPVAGYPIDSIVWERDNRALPINRKQKVFPNG---TLIIENVERNSDQATYTCVA 599
Query: 556 VNKGGVKSTK-AELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKP-KITWYRD 613
N+ G + E+ +M P+ +P F + G+ + + G P I W D
Sbjct: 600 KNQEGYSARGSLEVQVMVLPRI-IPFAFEEG-PAQVGQYLTLHCSVPGGDLPLNIDWTLD 657
Query: 614 NEVIESGGHFHVE-TSERHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQISDRPDP 672
+ I R ++LTI + A N G + + P
Sbjct: 658 GQAISEDLGITTSRVGRRGSVLTIEAVEASHAGNFTCHARNLAGHQQFTTPLNVYVPPRW 717
Query: 673 PQFPTVEDI-------------GHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSWIRV 719
PT + G + W+ G Y ++ S IRV
Sbjct: 718 ILEPTDKAFAQGSDAKVECKADGFPKPQVTWK---KAVGDTPGEY----KDLKKSDNIRV 770
Query: 720 GNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLIT 761
T+ + + ++ + A N G + +I+
Sbjct: 771 EE---GTLHVDNIQKTNEGYYLCEAINGIGSG--LSAVIMIS 807
Score = 196 bits (500), Expect = 2e-51
Identities = 93/529 (17%), Positives = 173/529 (32%), Gaps = 58/529 (10%)
Query: 63 IAVNAIGKSEPSICTTPVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKC 122
+ N++G T V + V G+ C+ TG P+
Sbjct: 324 VVNNSVGGESVETVLT-VT-------APLSAKIDPPTQTVDFGRPAVFTCQYTGNPIKTV 375
Query: 123 RWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIG- 181
W+++G+ I L V D G Y C N A S+ +K+G
Sbjct: 376 SWMKDGKAIGHSESV----------LRIESVKKEDKGMYQCFVRNDRESAEASAELKLGG 425
Query: 182 --TPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVL---- 235
PP I + + G + +K G+ E+S +G+ + ++DR++
Sbjct: 426 RFDPPVIRQAFQEETMEPGPSVFLKCVAGGNPTPEISWELDGKKIANNDRYQVGQYVTVN 485
Query: 236 -DDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTC 294
D + I + D G Y + G + +N+ GLP + + T
Sbjct: 486 GDVVSYLNITSVHANDGGLYKCIAKSKVGVAEHSAKLNVYGLP-YIRQMEKKAIVAGETL 544
Query: 295 TLHWNPPKYDGGLKVTHYVV-----ERRDISMPHWICISTTCHDTTFIVQGLTEGQEYLF 349
+ V Y + ER + ++P + T I + +
Sbjct: 545 IVT---------CPVAGYPIDSIVWERDNRALPINRKQKVFPNGTLIIENVERNSDQATY 595
Query: 350 HVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRI 409
+A N+ G + + P G ++ L P D I
Sbjct: 596 TCVAKNQEGYSARGSLEVQVMVLPRIIPFAFEEGPAQV---GQYLTLHCSVPGGDLPLNI 652
Query: 410 QGYWI-DKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASN 468
W D + D + S + I + F +A+N AG +
Sbjct: 653 D--WTLDGQAISEDLGITTSRVGRRGSVLTIEAVEASHAGNFTCHARNLAG---HQQFTT 707
Query: 469 SVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHH 528
+ + P P I+ + Q +A+ +C G PKP ++W K + +
Sbjct: 708 PLNVYVP-----PRWILEPTDKAFAQGSDAKVECKADGFPKPQVTWKKAVGDTPGEYKDL 762
Query: 529 IFAEG---DTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAP 574
++ + TL ++++ + Y+C A+N G + +I + A
Sbjct: 763 KKSDNIRVEEGTLHVDNIQKTNEGYYLCEAINGIGSGLSAVIMISVQAH 811
Score = 168 bits (428), Expect = 1e-42
Identities = 78/572 (13%), Positives = 154/572 (26%), Gaps = 75/572 (13%)
Query: 148 LHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVK--IGTPPRIDRMP-NALYIPEGDNTKVK 204
++ + A + G ++ P + P N + +++
Sbjct: 1 MNMPNERLKWLMLFAAVALIACGSQTLAANPPDADQKGPVFLKEPTNRIDFSNSTGAEIE 60
Query: 205 IFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIF-----IKEIRKEDAGDYTVNLS 259
+G+ E+ ++ D + D ++F ++ A Y
Sbjct: 61 CKASGNPMPEIIWIRSDGTAVGDVPGLRQISSDGKLVFPPFRAEDYRQEVHAQVYACLAR 120
Query: 260 NSSGSV-SGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVT-HYVVERR 317
N GS+ S + I ++ + P + + +
Sbjct: 121 NQFGSIISRDVHVRAVVAQYYEADVNKEHVIRGNSAVIKCLIPSFVADFVEVVSWHTDEE 180
Query: 318 DISMPHWICIS--TTCHDTTFIVQGLTEG-QEYLFHVMAVNENGMGPPLEG-INPIKAKS 373
+ P ++ + + + L +
Sbjct: 181 ENYFPGAEYDGKYLVLPSGELHIREVGPEDGYKSYQCRTKHRLTGETRLSATKGRLVITE 240
Query: 374 PYDKPSPPGIPV-----VTQVGGDFVNL------------SWDKPLDDGGSRIQGYWIDK 416
P P + + T G + L W K +G +R Q ++
Sbjct: 241 PISSAVPKVVSLAKFDMKTYSGSSTMALLCPAQGYPVPVFRWYK-FIEGTTRKQAVVLND 299
Query: 417 HEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPM 476
+ I + + ++ N G S + + P
Sbjct: 300 RVKQVSGT------------LIIKDAVVEDSGKYLCVVNNSVG---GESVETVLTVTAP- 343
Query: 477 AAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTY 536
+ A F C TG P T+SW+K + I S
Sbjct: 344 ----LSAKIDPPTQTVDFGRPAVFTCQYTGNPIKTVSWMKDGKAIGHSES---------- 389
Query: 537 TLIINSVYGVDADEYVCRAVNKGGVKSTKAELII---MTAPKFNVPPRFRDTAYFDKGEN 593
L I SV D Y C N AEL + P + + G +
Sbjct: 390 VLRIESVKKEDKGMYQCFVRNDRESAEASAELKLGGRFDPPVIRQAFQ---EETMEPGPS 446
Query: 594 VVVKIPFTGYPKPKITWYRDNEVIESGGHFHV-----ETSERHAILTIRDASNVDTAPYR 648
V +K G P P+I+W D + I + + V + + L I D Y+
Sbjct: 447 VFLKCVAGGNPTPEISWELDGKKIANNDRYQVGQYVTVNGDVVSYLNITSVHANDGGLYK 506
Query: 649 VVAENDLGMDSAIVKIQISDRP--DPPQFPTV 678
+A++ +G+ K+ + P + +
Sbjct: 507 CIAKSKVGVAEHSAKLNVYGLPYIRQMEKKAI 538
Score = 157 bits (399), Expect = 4e-39
Identities = 96/584 (16%), Positives = 172/584 (29%), Gaps = 99/584 (16%)
Query: 1666 EFRIIAVNAIGKSEPSICTTPVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEA---T 1722
+ +A N G SI + V + + + V G ++C
Sbjct: 114 VYACLARNQFG----SIISRDVHV---RAVVAQYYEADVNKEHVIRGNSAVIKCLIPSFV 166
Query: 1723 GTPVPKCRWLRNGREI-----SSGARYRVETAGGVFRLHFNEVTDVD-NGDYTCEAYNSV 1776
V W + E +Y V +G LH EV D Y C + +
Sbjct: 167 ADFVEVVSWHTDEEENYFPGAEYDGKYLVLPSG---ELHIREVGPEDGYKSYQCRTKHRL 223
Query: 1777 GFAHTSS---RVKIGTPPRIDRMP--------NALYIPEGDNTKVKIFYAGDQPMEVSLT 1825
S + T P +P + + G
Sbjct: 224 TGETRLSATKGRLVITEPISSAVPKVVSLAKFDMKTYSGSSTMALLCPAQGYPVPVFRWY 283
Query: 1826 KNGRVVQSDDRFKFT--VLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGL 1883
K V + IK+ ED+G Y ++NS G S + +T
Sbjct: 284 KFIEGTTRKQAVVLNDRVKQVSGTLIIKDAVVEDSGKYLCVVNNSVGGESVETVLTVTAP 343
Query: 1884 PGPPIGP----LDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCH 1939
I P +D TC NP K V+ + ++ H
Sbjct: 344 LSAKIDPPTQTVDFGRPAVFTCQYTGNPIK-----TVSWM---KDGKAIGH--------S 387
Query: 1940 DTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPS--PPGIPVVTQVG 1997
++ ++ + + + ++ N+ E +K +D P + G
Sbjct: 388 ESVLRIESVKKEDKGMYQCFVRNDRES---AEASAELKLGGRFDPPVIRQAFQEETMEPG 444
Query: 1998 GDFV-----------NLSW---DKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQ 2043
+SW K + + G Q V V S
Sbjct: 445 PSVFLKCVAGGNPTPEISWELDGKKIANNDRYQVG-------------QYVTVNGDVVSY 491
Query: 2044 INIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNH 2103
+NI ++ ++ A+++ G A +S ++ I + +
Sbjct: 492 LNITSVHANDGGLYKCIAKSKVG-----VAEHSAKLN----VYGLPYIRQMEKKAIVAGE 542
Query: 2104 NAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVY-GVDADEYVCRA 2162
C + G P +I W + +R + + + +F G TLII +V D Y C A
Sbjct: 543 TLIVTCPVAGYPIDSIVWERDNRALPINRKQKVFPNG---TLIIENVERNSDQATYTCVA 599
Query: 2163 VNKGGVKSTK-AELIIMTAPKFNVPPRFRDTAYFESDVVVVVCV 2205
N+ G + E+ +M P+ +P F + + + C
Sbjct: 600 KNQEGYSARGSLEVQVMVLPRI-IPFAFEEGPAQVGQYLTLHCS 642
Score = 137 bits (346), Expect = 1e-32
Identities = 102/737 (13%), Positives = 194/737 (26%), Gaps = 178/737 (24%)
Query: 1100 ENHEYEFRVCAVNAAGQGPWSSSSDIIMCCAPPC---APKITSDLSIRDMTVLAGEEFTI 1156
E+ ++ + S++ + P PK+ S T +
Sbjct: 209 EDGYKSYQCRTKHRLTGETRLSATKGRLVITEPISSAVPKVVSLAKFDMKTYSGSSTMAL 268
Query: 1157 TVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQ-----TIYRNKSAKRATDSGSYTIQ 1211
P G P P W + + + Q I DSG Y
Sbjct: 269 LCPAQGYPVPVFRWYKFIEGTTRKQAVVLNDRVKQVSGTLIIKD----AVVEDSGKYLCV 324
Query: 1212 LVNTVGSDSASCKVYVVDKPSPPQGPLDVSDITPES-----CSLSWKPPLDDGGSPITNY 1266
+ N+VG +S + V S P + + C + G+PI
Sbjct: 325 VNNSVGGESVETVLTVTAPLSAKIDPPTQT-VDFGRPAVFTCQYT--------GNPIKTV 375
Query: 1267 VVEKYESATGFWSKLSSFVRSP--AYDVFGLETNRQYRFRVRAENQYGVSEPLELDNSIT 1324
W K + + ++ + ++ N S
Sbjct: 376 ----------SWMKDGKAIGHSESVLRIESVKKEDKGMYQCFVRNDRE---------SAE 416
Query: 1325 AKFPFTVPDPPGQPQIVDWDTN-------------------NATLMWDRP----RTDGGS 1361
A + P I + W+ +
Sbjct: 417 ASAELKLGGRFDPPVIRQAFQEETMEPGPSVFLKCVAGGNPTPEISWELDGKKIANNDRY 476
Query: 1362 KIQGYKMLLKTPTGELPTTIWSKIRPTSSTVYCKDTTMNSSNSEPGK--QSGPVIVEEQP 1419
++ Y + L I + + +Y + + G S + V P
Sbjct: 477 QVGQYVTVNGDVVSYL--NI-TSVHANDGGLY----KCIAKSKV-GVAEHSAKLNVYGLP 528
Query: 1420 NKPVMDLSGVRDITVKAGEDFSIHVPFMAFPQPAAFWFANDSIIDDSDTRVHKQLTMNSA 1479
+ + + AGE + P +P + W ++ + + KQ +
Sbjct: 529 -----YIRQMEKKAIVAGETLIVTCPVAGYPIDSIVWERDNRALPIN----RKQKVFPNG 579
Query: 1480 SLVVKNSQR-SDGGQYRLQLKNPAGFDTATLHSRLRTLPDSVNPRCHLPSSTSKERPKFP 1538
+L+++N +R SD Y KN G S + P+
Sbjct: 580 TLIIENVERNSDQATYTCVAKNQEG--------------YSARGSLEV---QVMVLPRII 622
Query: 1539 THPNHQPWLKWARASLTSKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIK 1598
G ++L S P G + I W
Sbjct: 623 PFAF--------EEGPAQVG-----QYLTLHCSVP----GGDLPLNI---------DWTL 656
Query: 1599 ASMAHIPDTSLKYVLWVSEGKSIGSERGSTAQFLEREVGGAIWLKCNDYNVLECSFSVLN 1658
+G++I + G T + R ++
Sbjct: 657 ------------------DGQAISEDLGITTSRVGRRGS---------------VLTIEA 683
Query: 1659 LVEGNDYEFRIIAVNAIGKSEPSICTTPVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQ 1718
+ + F A N G + TTP+ + P +I+ D G ++
Sbjct: 684 VEASHAGNFTCHARNLAGHQQ---FTTPLNV-----YVPPRWILEPTDKAFAQGSDAKVE 735
Query: 1719 CEATGTPVPKCRWLRNGREISSGARYRVETAGGVF---RLHFNEVTDVDNGDYTCEAYNS 1775
C+A G P P+ W + + + ++ LH + + + G Y CEA N
Sbjct: 736 CKADGFPKPQVTWKKAVGDTPGEYKDLKKSDNIRVEEGTLHVDNIQKTNEGYYLCEAING 795
Query: 1776 VGFAHTSSR-VKIGTPP 1791
+G ++ + +
Sbjct: 796 IGSGLSAVIMISVQAHH 812
Score = 115 bits (288), Expect = 1e-25
Identities = 62/487 (12%), Positives = 120/487 (24%), Gaps = 67/487 (13%)
Query: 1755 LHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVK--IGTPPRIDRMP-NALYIPEGDNTKVK 1811
++ + A + G ++ P + P N + +++
Sbjct: 1 MNMPNERLKWLMLFAAVALIACGSQTLAANPPDADQKGPVFLKEPTNRIDFSNSTGAEIE 60
Query: 1812 IFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIF-----IKEIRKEDAGDYTVNLS 1866
+G+ E+ ++ D + D ++F ++ A Y
Sbjct: 61 CKASGNPMPEIIWIRSDGTAVGDVPGLRQISSDGKLVFPPFRAEDYRQEVHAQVYACLAR 120
Query: 1867 NSSGSV-SGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVT-HYVVERR 1924
N GS+ S + I ++ + P + + +
Sbjct: 121 NQFGSIISRDVHVRAVVAQYYEADVNKEHVIRGNSAVIKCLIPSFVADFVEVVSWHTDEE 180
Query: 1925 DISMPHWICIS--TTCHDTTFIVQGLTEG-QEYLFHVMAVNENGMGPPLEG-INPIKAKS 1980
+ P ++ + + + L +
Sbjct: 181 ENYFPGAEYDGKYLVLPSGELHIREVGPEDGYKSYQCRTKHRLTGETRLSATKGRLVITE 240
Query: 1981 PYDKPSPPGIPV-----VTQVGGDFVNL------------SWDKPLDDGGSRIQGYWIDK 2023
P P + + T G + L W K +G +R Q ++
Sbjct: 241 PISSAVPKVVSLAKFDMKTYSGSSTMALLCPAQGYPVPVFRWYK-FIEGTTRKQAVVLND 299
Query: 2024 HEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPM 2083
+ I + + ++ N G S + + P
Sbjct: 300 RVKQVSGT------------LIIKDAVVEDSGKYLCVVNNSVG---GESVETVLTVTAP- 343
Query: 2084 AAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTY 2143
+ A F C TG P T+SW+K + I S
Sbjct: 344 ----LSAKIDPPTQTVDFGRPAVFTCQYTGNPIKTVSWMKDGKAIGHSES---------- 389
Query: 2144 TLIINSVYGVDADEYVCRAVNKGGVKSTKAELII---MTAPKFNVPPRFRDTAYFESDVV 2200
L I SV D Y C N AEL + P ++ V
Sbjct: 390 VLRIESVKKEDKGMYQCFVRNDRESAEASAELKLGGRFDPPVIRQAF--QEETMEPGPSV 447
Query: 2201 VVVCVCF 2207
+ CV
Sbjct: 448 FLKCVAG 454
Score = 108 bits (272), Expect = 9e-24
Identities = 60/367 (16%), Positives = 103/367 (28%), Gaps = 56/367 (15%)
Query: 450 FRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIV-PLRNANAIQNHNAQFQCTITGCP 508
F A G S + + D K P + P + + A+ +C +G P
Sbjct: 14 FAAVALIACG-----SQTLAANPPDA-DQKGPVFLKEPTNRIDFSNSTGAEIECKASGNP 67
Query: 509 KPTISWLKGSREITPSARHHIFAEGDTYTLIINSV------YGVDADEYVCRAVNKGG-V 561
P I W++ D L+ V A Y C A N+ G +
Sbjct: 68 MPEIIWIRSDGTAVGDVPGLRQISSD-GKLVFPPFRAEDYRQEVHAQVYACLARNQFGSI 126
Query: 562 KSTKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVK---IPFTGYPKPKITWYRDNEVIE 618
S + + A + G + V+K F ++W+ D E
Sbjct: 127 ISRDVHVRAVVAQYYEADVNKEHVIR---GNSAVIKCLIPSFVADFVEVVSWHTDEEENY 183
Query: 619 SGGHFHVETSERHAI-----LTIRDASNVDTAP-YRVVAENDLGMD---SAIVKIQISDR 669
E ++ + L IR+ D Y+ ++ L + SA +
Sbjct: 184 FP---GAEYDGKYLVLPSGELHIREVGPEDGYKSYQCRTKHRLTGETRLSATKGRLVITE 240
Query: 670 PDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNY-IVEKREHPMSSWIRVG-------- 720
P P V + + G S + + P+ W +
Sbjct: 241 PISSAVPKVVSLAKFDMKTY------SGSSTMALLCPAQGYPVPVFRWYKFIEGTTRKQA 294
Query: 721 ---NTRFT----TMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKDTFKKQIKKR 773
N R T+ I ++ N G + T +T + K +
Sbjct: 295 VVLNDRVKQVSGTLIIKDAVVEDSGKYLCVVNNSVG-GESVETVLTVTAPLSAKIDPPTQ 353
Query: 774 QYDFDET 780
DF
Sbjct: 354 TVDFGRP 360
Score = 95.8 bits (238), Expect = 1e-19
Identities = 44/243 (18%), Positives = 80/243 (32%), Gaps = 28/243 (11%)
Query: 60 FRIIAVNAIGKSEPSICTTPVKICEFVGGEKPDFIV-PLKDLVVPLGKLLTLQCEATGTP 118
F +A+ A G + + P F+ P + ++C+A+G P
Sbjct: 14 FAAVALIACGSQTLAANPPDAD------QKGPVFLKEPTNRIDFSNSTGAEIECKASGNP 67
Query: 119 VPKCRWLR-NGREISSGARYRVETAGGVFRLHFNEVT------DVDNGDYTCEAYNSVGF 171
+P+ W+R +G + R ++ G +L F +V Y C A N G
Sbjct: 68 MPEIIWIRSDGTAVGDVPGLRQISSDG--KLVFPPFRAEDYRQEVHAQVYACLARNQFGS 125
Query: 172 AHTSS-RVKIGTPPRIDRMPNALYIPEGDNTKVK---IFYAGDQPMEVSLTKNGRVVQSD 227
+ V+ + N ++ G++ +K + D VS +
Sbjct: 126 IISRDVHVRAVVAQYYEADVNKEHVIRGNSAVIKCLIPSFVADFVEVVSWHTDEEENYFP 185
Query: 228 DRF---KFTVLDDYIIIFIKEIRKEDA-GDYTVNLSNSSGS---VSGTFTINITGLPGPP 280
K+ VL + I+E+ ED Y + +S T + P
Sbjct: 186 GAEYDGKYLVLPSGELH-IREVGPEDGYKSYQCRTKHRLTGETRLSATKGRLVITEPISS 244
Query: 281 IGP 283
P
Sbjct: 245 AVP 247
Score = 95.8 bits (238), Expect = 1e-19
Identities = 44/243 (18%), Positives = 80/243 (32%), Gaps = 28/243 (11%)
Query: 1667 FRIIAVNAIGKSEPSICTTPVKICEFVGGEKPDFIV-PLKDLVVPLGKLLTLQCEATGTP 1725
F +A+ A G + + P F+ P + ++C+A+G P
Sbjct: 14 FAAVALIACGSQTLAANPPDAD------QKGPVFLKEPTNRIDFSNSTGAEIECKASGNP 67
Query: 1726 VPKCRWLR-NGREISSGARYRVETAGGVFRLHFNEVT------DVDNGDYTCEAYNSVGF 1778
+P+ W+R +G + R ++ G +L F +V Y C A N G
Sbjct: 68 MPEIIWIRSDGTAVGDVPGLRQISSDG--KLVFPPFRAEDYRQEVHAQVYACLARNQFGS 125
Query: 1779 AHTSS-RVKIGTPPRIDRMPNALYIPEGDNTKVK---IFYAGDQPMEVSLTKNGRVVQSD 1834
+ V+ + N ++ G++ +K + D VS +
Sbjct: 126 IISRDVHVRAVVAQYYEADVNKEHVIRGNSAVIKCLIPSFVADFVEVVSWHTDEEENYFP 185
Query: 1835 DRF---KFTVLDDYIIIFIKEIRKEDA-GDYTVNLSNSSGS---VSGTFTINITGLPGPP 1887
K+ VL + I+E+ ED Y + +S T + P
Sbjct: 186 GAEYDGKYLVLPSGELH-IREVGPEDGYKSYQCRTKHRLTGETRLSATKGRLVITEPISS 244
Query: 1888 IGP 1890
P
Sbjct: 245 AVP 247
Score = 90.4 bits (224), Expect = 4e-18
Identities = 32/147 (21%), Positives = 49/147 (33%), Gaps = 12/147 (8%)
Query: 2061 AQNEAGLSLPSSASNSVQIKDPMAAKAPEII-VPLRNANAIQNHNAQFQCTITGCPKP-T 2118
A+N+ G S + S VQ+ P II A C++ G P
Sbjct: 599 AKNQEGYS--ARGSLEVQVMVL-----PRIIPFAFEEGPAQVGQYLTLHCSVPGGDLPLN 651
Query: 2119 ISWLKGSREITPSARHHI-FAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELII 2177
I W + I+ L I +V A + C A N G + L +
Sbjct: 652 IDWTLDGQAISEDLGITTSRVGRRGSVLTIEAVEASHAGNFTCHARNLAGHQQFTTPLNV 711
Query: 2178 MTAPKFNVPPRFRDTAYFESDVVVVVC 2204
P++ + P D A+ + V C
Sbjct: 712 YVPPRWILEP--TDKAFAQGSDAKVEC 736
Score = 84.6 bits (209), Expect = 2e-16
Identities = 78/475 (16%), Positives = 138/475 (29%), Gaps = 77/475 (16%)
Query: 1064 VLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPWSSSS 1123
V W+ +GK+IG R+ S+ + + ++ N S+
Sbjct: 375 VSWMKDGKAIGHSESVL-------------RIESVKKEDKGMYQCFVRNDRESAEASAEL 421
Query: 1124 DIIMCCAPPCAPKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRI 1183
+ P I + T+ G + G P P W ++G +++ + R
Sbjct: 422 KLG---GRFDPPVIRQAFQ--EETMEPGPSVFLKCVAGGNPTPEISWELDGKKIANNDRY 476
Query: 1184 KFETSENQTIYRNKSAK--------RATDSGSYTIQLVNTVGSDSASCKVYVVDKP---S 1232
+ Q + N A D G Y + VG S K+ V P
Sbjct: 477 QV----GQYVTVNGDVVSYLNITSVHANDGGLYKCIAKSKVGVAEHSAKLNVYGLPYIRQ 532
Query: 1233 PPQGPLDVSDITPESCSLSWKPPLD-----DGGSPITNYVVEKYESATGFWSKLSSFVRS 1287
+ + + +C ++ P D + N + + + T L
Sbjct: 533 MEKKAIVAGETLIVTCPVAGYPIDSIVWERDNRALPINRKQKVFPNGT-----LIIENVE 587
Query: 1288 PAYDVFGLETNRQYRFRVRAENQYGVSEPLELDNSITAKFPFTVPDPPGQPQIVDWDTNN 1347
D Q + A+NQ G S L+ + P V
Sbjct: 588 RNSD--------QATYTCVAKNQEGYSARGSLEVQVMVLPRIIPFAFEEGPAQVG---QY 636
Query: 1348 ATLMWDRPRTDGGSKIQGYKMLLKTPTGELPTTIWSKIRPTSSTVYCKDTTMNSS----- 1402
TL P D I E S++ S + + + +
Sbjct: 637 LTLHCSVPGGDLPLNIDWTL--DGQAISEDLGITTSRVGRRGSVLTIEAVEASHAGNFTC 694
Query: 1403 --NSEPGKQ--SGPVIVEEQP---NKPVMDLSGVRDITVKAGEDFSIHVPFMAFPQPAAF 1455
+ G Q + P+ V P +P D G D + FP+P
Sbjct: 695 HARNLAGHQQFTTPLNVYVPPRWILEP-------TDKAFAQGSDAKVECKADGFPKPQVT 747
Query: 1456 WFANDSII--DDSDTRVHKQLTMNSASLVVKNSQRSDGGQYRLQLKNPAGFDTAT 1508
W + D + + + +L V N Q+++ G Y + N G +
Sbjct: 748 WKKAVGDTPGEYKDLKKSDNIRVEEGTLHVDNIQKTNEGYYLCEAINGIGSGLSA 802
Score = 83.8 bits (207), Expect = 4e-16
Identities = 26/138 (18%), Positives = 50/138 (36%), Gaps = 12/138 (8%)
Query: 51 NLVEGNDYEFRIIAVNAIGKSEPSICTTPVKICEFVGGEKPDFIVPLKDLVVPLGKLLTL 110
+ + F A N G + TTP+ + P +I+ D G +
Sbjct: 683 AVEASHAGNFTCHARNLAGHQQ---FTTPLNV-----YVPPRWILEPTDKAFAQGSDAKV 734
Query: 111 QCEATGTPVPKCRWLRNGREISSGARYRVETAGGVF---RLHFNEVTDVDNGDYTCEAYN 167
+C+A G P P+ W + + + ++ LH + + + G Y CEA N
Sbjct: 735 ECKADGFPKPQVTWKKAVGDTPGEYKDLKKSDNIRVEEGTLHVDNIQKTNEGYYLCEAIN 794
Query: 168 SVGFAHTSSR-VKIGTPP 184
+G ++ + +
Sbjct: 795 GIGSGLSAVIMISVQAHH 812
Score = 72.7 bits (178), Expect = 1e-12
Identities = 57/448 (12%), Positives = 110/448 (24%), Gaps = 88/448 (19%)
Query: 1106 FRVCAVNAAGQGPWSSSSDIIMCCAPPCAPKITSDLSIRDMTVLAGEEFTITVPFSGRPK 1165
F A+ A G +++ P + + + I SG P
Sbjct: 14 FAAVALIACGSQTLAANPPDAD----QKGPVFLKEPT-NRIDFSNSTGAEIECKASGNPM 68
Query: 1166 PTPIWTVNGDEVSPDGRIKFETSENQTIY----RNKSAKRATDSGSYTIQLVNTVGSD-S 1220
P IW + D + S + + R + ++ + Y N GS S
Sbjct: 69 PEIIWIRSDGTAVGDVPGLRQISSDGKLVFPPFRAEDYRQEVHAQVYACLARNQFGSIIS 128
Query: 1221 ASCKVYVVDKPSPPQGPLDVSDITPESCSLSWKPPLDDGGSPITNYVVEKYESATGFWSK 1280
V V I S + P + W
Sbjct: 129 RDVHVRAVVAQYYEADVNKEHVIRGNSAVIKCLIP-SFVADFVEVV----------SWHT 177
Query: 1281 LSSFVRSPAYDVFG---------------LETNRQYRFRVRAENQYGVSEPLE------- 1318
P + G + ++ R +++ L
Sbjct: 178 DEEENYFPGAEYDGKYLVLPSGELHIREVGPEDGYKSYQCRTKHRLTGETRLSATKGRLV 237
Query: 1319 LDNSITAKFPFTVPDPPGQPQIVDWDTN-----------NATLMWDRPRTDGGSKIQGYK 1367
+ I++ P V + + W + +
Sbjct: 238 ITEPISSAVPKVVSLAKFDMKTYSGSSTMALLCPAQGYPVPVFRWYK---FIEGTTRKQA 294
Query: 1368 MLLKTPTGELPTTIW-SKIRPTSSTVY-CKDTTMNSSNSEPGKQ--SGPVIVEEQPN--- 1420
++L ++ T+ S Y C +NS G + + V +
Sbjct: 295 VVLNDRVKQVSGTLIIKDAVVEDSGKYLCV-----VNNSV-GGESVETVLTVTAPLSAKI 348
Query: 1421 KPVMDLSGVRDITVKAGEDFSIHVPFMAFPQPAAFWFANDSIIDDSDTRVHKQLTMNSAS 1480
P TV G + P W + I S+ +
Sbjct: 349 DP-------PTQTVDFGRPAVFTCQYTGNPIKTVSWMKDGKAIGHSE-----------SV 390
Query: 1481 LVVKNSQRSDGGQYRLQLKNPAGFDTAT 1508
L +++ ++ D G Y+ ++N A+
Sbjct: 391 LRIESVKKEDKGMYQCFVRNDRESAEAS 418
Score = 71.5 bits (175), Expect = 3e-12
Identities = 32/268 (11%), Positives = 69/268 (25%), Gaps = 22/268 (8%)
Query: 538 LIINSVYGVDADEYVCRAVNKGGVKSTKAE--LIIMTAPKFNVPPRFRDTAYFDKGENVV 595
+ + + + A+ G ++ A P F P + F
Sbjct: 1 MNMPNERLKWLMLFAAVALIACGSQTLAANPPDADQKGPVFLKEP--TNRIDFSNSTGAE 58
Query: 596 VKIPFTGYPKPKITWYRDN-EVIESGGHFHVETSERHAILTIRDASNVDTAP------YR 648
++ +G P P+I W R + + +S+ L D Y
Sbjct: 59 IECKASGNPMPEIIWIRSDGTAVGDVPGLRQISSDGK--LVFPPFRAEDYRQEVHAQVYA 116
Query: 649 VVAENDLGMD-SAIVKIQISDRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVE 707
+A N G S V ++ E + + A++ +
Sbjct: 117 CLARNQFGSIISRDVHVRAVVAQYYEADVNKEHVIRGNSAVIKCLIPSFVADFVEVVSWH 176
Query: 708 KREHPMSSWIRVGNTRFTTMA-----ITGLSPGHQY-EFRVYAENVYGRSDP--STTSDL 759
E + ++ + I + P Y ++ ++ +T L
Sbjct: 177 TDEEENYFPGAEYDGKYLVLPSGELHIREVGPEDGYKSYQCRTKHRLTGETRLSATKGRL 236
Query: 760 ITTKDTFKKQIKKRQYDFDETGKKIRGK 787
+ T+ K +
Sbjct: 237 VITEPISSAVPKVVSLAKFDMKTYSGSS 264
Score = 69.2 bits (169), Expect = 1e-11
Identities = 53/349 (15%), Positives = 109/349 (31%), Gaps = 57/349 (16%)
Query: 1201 RATDSGSYTIQLVNTVGSDSASCKVYVVDKPSPP--QGPLDVSDITPES-----CSLSWK 1253
R + + GS + + D+ P + P + D + + C S
Sbjct: 7 RLKWLMLFAAVALIACGSQTLAANPPDADQKGPVFLKEPTNRIDFSNSTGAEIECKASGN 66
Query: 1254 PPLD-----DGGSPITNYVVEKYESATGFWSKLSSFVRSPAYDVFGLETNRQYRFRVRAE 1308
P + G+ + + + S+ G V P + + A
Sbjct: 67 PMPEIIWIRSDGTAVGDVPGLRQISSDG------KLVFPPFRAEDYRQEVHAQVYACLAR 120
Query: 1309 NQYG--VSEPLELDNSI-----------------TAKFPFTVPDPPGQPQ-IVDWDTNNA 1348
NQ+G +S + + + +A +P +V W T+
Sbjct: 121 NQFGSIISRDVHVRAVVAQYYEADVNKEHVIRGNSAVIKCLIPSFVADFVEVVSWHTDEE 180
Query: 1349 TLMWDRPRTDGGSKIQGYKMLLKTPTGELPTTIWSKIRPT-SSTVY-CKDTTMNSSNSEP 1406
+ DG + P+GEL I ++ P Y C+ T +
Sbjct: 181 ENYFPGAEYDGKYLVL--------PSGEL--HI-REVGPEDGYKSYQCR-TKHRLTGETR 228
Query: 1407 GKQSGPVIVEEQPNK----PVMDLSGVRDITVKAGEDFSIHVPFMAFPQPAAFWF-ANDS 1461
+ +V +P V+ L+ T ++ P +P P W+ +
Sbjct: 229 LSATKGRLVITEPISSAVPKVVSLAKFDMKTYSGSSTMALLCPAQGYPVPVFRWYKFIEG 288
Query: 1462 IIDDSDTRVHKQLTMNSASLVVKNSQRSDGGQYRLQLKNPAGFDTATLH 1510
++ ++ S +L++K++ D G+Y + N G ++
Sbjct: 289 TTRKQAVVLNDRVKQVSGTLIIKDAVVEDSGKYLCVVNNSVGGESVETV 337
Score = 65.3 bits (159), Expect = 2e-10
Identities = 28/176 (15%), Positives = 65/176 (36%), Gaps = 16/176 (9%)
Query: 1064 VLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPWSSSS 1123
+ W +G++I + G T + + + ++ +H F A N AG +++
Sbjct: 652 IDWTLDGQAISEDLGITTSRVGRRGSVL--TIEAVEASHAGNFTCHARNLAGHQQFTTPL 709
Query: 1124 DIIMCCAPPCAPKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRI 1183
++ + P+ + + D G + + G PKP W + + +
Sbjct: 710 NVYV------PPRWILEPT--DKAFAQGSDAKVECKADGFPKPQVTWKKAVGDTPGEYK- 760
Query: 1184 KFETSENQTIYRN----KSAKRATDSGSYTIQLVNTVGSDSASCKVYVVDKPSPPQ 1235
+ S+N + + + T+ G Y + +N +GS ++ + V
Sbjct: 761 DLKKSDNIRVEEGTLHVDNI-QKTNEGYYLCEAINGIGSGLSAVIMISVQAHHHHH 815
Score = 64.6 bits (157), Expect = 3e-10
Identities = 78/495 (15%), Positives = 144/495 (29%), Gaps = 96/495 (19%)
Query: 1064 VLWV-SEGKSIGSERGSTAQFLELLLMFIPNRVT-SLIENHEYEFRVCAVNAAGQGPWSS 1121
++W+ S+G ++G G + L+F P R E H + A N G
Sbjct: 71 IIWIRSDGTAVGDVPGLRQISSDGKLVFPPFRAEDYRQEVHAQVYACLARNQFGS---II 127
Query: 1122 SSDIIMCCAPPCAPKITSDLSIRDMTVLAGEEFTIT---VPFSGRPKPTPIWTVNGDEV- 1177
S D+ + +D+ V+ G I F W + +E
Sbjct: 128 SRDVHVRAVVA--QYYEADV--NKEHVIRGNSAVIKCLIPSFVADFVEVVSWHTDEEENY 183
Query: 1178 ----SPDGRIKFETSENQTIYRNKSAKRATDSGSYTIQLVNTVGSD---SASCKVYVVDK 1230
DG+ S I + SY + + + + SA+ V+ +
Sbjct: 184 FPGAEYDGKYLVLPSGELHI---REVGPEDGYKSYQCRTKHRLTGETRLSATKGRLVITE 240
Query: 1231 PSPPQGPLDVSDITPESCSLSWKPPLDDGGSPITNYVVEKYESATGF------WSKLSSF 1284
P P VS + + G S + A G+ W K
Sbjct: 241 PISSAVPKVVSLAKFDMKTY-------SGSSTMALLCP-----AQGYPVPVFRWYKFIEG 288
Query: 1285 VRSPAYDVFGLETNRQYR--------------FRVRAENQYGVSEPLELDNSITAKFPFT 1330
V + + N G + + T
Sbjct: 289 TTRKQAVVLNDRVKQVSGTLIIKDAVVEDSGKYLCVVNNSVG---------GESVETVLT 339
Query: 1331 VPDPPG-----QPQIVDWDTNNATLMWD-----RPRTDGGSKIQGYK--MLLKTPTGELP 1378
V P Q VD+ ++ P + K + L
Sbjct: 340 VTAPLSAKIDPPTQTVDF---GRPAVFTCQYTGNPI----KTVSWMKDGKAIGHSESVL- 391
Query: 1379 TTIWSKIRPTSSTVYCKDTTMNSSNS-EPGKQSGPVIVEEQPNKPVMDLSGVRDITVKAG 1437
I ++ +Y N E + S + + + + PV+ ++ T++ G
Sbjct: 392 -RI-ESVKKEDKGMY----QCFVRNDRESAEASAELKLGGRFDPPVI-RQAFQEETMEPG 444
Query: 1438 EDFSIHVPFMAFPQPAAFWFANDSIIDDSD-TRVHKQLTMN---SASLVVKNSQRSDGGQ 1493
+ P P W + I ++D +V + +T+N + L + + +DGG
Sbjct: 445 PSVFLKCVAGGNPTPEISWELDGKKIANNDRYQVGQYVTVNGDVVSYLNITSVHANDGGL 504
Query: 1494 YRLQLKNPAGFDTAT 1508
Y+ K+ G +
Sbjct: 505 YKCIAKSKVGVAEHS 519
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL
structural protein; 3.30A {Oryctolagus cuniculus}
Length = 570
Score = 206 bits (527), Expect = 1e-56
Identities = 104/617 (16%), Positives = 210/617 (34%), Gaps = 93/617 (15%)
Query: 183 PPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIF 242
PP + G+ ++ G + ++ K ++S +K ++ +
Sbjct: 5 PPYFIEPLEHVEAAIGEPITLQCKVDGTPEIRIAWYKEHTKLRSAPAYKMQFKNNVASLV 64
Query: 243 IKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPI---GPLDVSEITKHT----CT 295
I ++ D G+YT NS G+V+ + + I PP DV E C
Sbjct: 65 INKVDHSDVGEYTCKAENSVGAVASSAVLVIKERKLPPSFARKLKDVHETLGFPVAFECR 124
Query: 296 LHWNPP-----KYDGGLKVTHYVVERRDISMPHWICISTTCHDTTFIVQGLTEGQEYLFH 350
++ + P DG L + + ++ S + T + + ++
Sbjct: 125 INGSEPLQVSWYKDGEL-----LKDDANLQ------TSFIHNVATLQILQTDQSHVGQYN 173
Query: 351 VMAVNENG---MGPPL----EGINPIKAKSPYDKPSPPGIPVV--TQVGGD-FVNLSW-- 398
A N G L + P P G V G + ++W
Sbjct: 174 CSASNPLGTASSSAKLTLSEHEVPPFFDLKPVSVDLALGESGTFKCHVTGTAPIKITWAK 233
Query: 399 -DKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNE 457
++ + GG +++ + + + +G ++ YA N
Sbjct: 234 DNREIRPGG---------NYKMTLVENTAT---------LTVLKVTKGDAGQYTCYASNV 275
Query: 458 AGLSLPSSASNSVQIKDPMAAKAPEIIVPLR-NANAIQNHNAQFQCTITGCPKPTISWLK 516
AG S S + +++P P I L + Q+ + +++C I G P+ + W K
Sbjct: 276 AG---KDSCSAQLGVQEP-----PRFIKKLEPSRIVKQDEHTRYECKIGGSPEIKVLWYK 327
Query: 517 GSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKF 576
EI S++ + L + ++ D+ +Y C A N G S+ L + P F
Sbjct: 328 DETEIQESSKFRMSFVESVAVLEMYNLSVEDSGDYTCEAHNAAGSASSSTSLKVKEPPVF 387
Query: 577 NVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSERHAILTI 636
P +T KG +V ++ G P +++W++D + SG + + + + I
Sbjct: 388 RKKPHPVETL---KGADVHLECELQGTPPFQVSWHKDKRELRSGKKYKIMSENFLTSIHI 444
Query: 637 RDASNVDTAPYRVVAENDLGMDSAIVKIQISDRP---DPPQFPTV----------EDIGH 683
+ + D Y+ A ND+G D+ + I + P + G
Sbjct: 445 LNVDSADIGEYQCKASNDVGSDTCVGSITLKAPPRFVKKLSDISTVVGEEVQLQATIEGA 504
Query: 684 DSLALVWRAPIWDGGSNITNYIVEKREHPMSSWIRVGNTRFTTMAITGLSPGHQYEFRVY 743
+ +++ W D G + + + T+ + P + ++
Sbjct: 505 EPISVAWFK---DKGEIVRES---------DNIWISYSENIATLQFSRAEPANAGKYTCQ 552
Query: 744 AENVYGRSDPSTTSDLI 760
+N G + L
Sbjct: 553 IKNEAGTQ--ECFATLS 567
Score = 163 bits (415), Expect = 4e-42
Identities = 47/221 (21%), Positives = 86/221 (38%), Gaps = 12/221 (5%)
Query: 449 EFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCP 508
++ A N AG + S+S S+++K+P P ++ + +C + G P
Sbjct: 361 DYTCEAHNAAGSA---SSSTSLKVKEP-----PVFRKKPHPVETLKGADVHLECELQGTP 412
Query: 509 KPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAEL 568
+SW K RE+ ++ I +E ++ I +V D EY C+A N G + +
Sbjct: 413 PFQVSWHKDKRELRSGKKYKIMSENFLTSIHILNVDSADIGEYQCKASNDVGSDTCVGSI 472
Query: 569 IIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVI-ESGGHFHVET 627
+ P+F T GE V ++ G + W++D I + +
Sbjct: 473 TLKAPPRFVKKLSDISTV---VGEEVQLQATIEGAEPISVAWFKDKGEIVRESDNIWISY 529
Query: 628 SERHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQISD 668
SE A L A + Y +N+ G + + +
Sbjct: 530 SENIATLQFSRAEPANAGKYTCQIKNEAGTQECFATLSVLE 570
Score = 161 bits (409), Expect = 2e-41
Identities = 55/236 (23%), Positives = 101/236 (42%), Gaps = 6/236 (2%)
Query: 63 IAVNAIGKSEPSICTTPVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKC 122
A N +G + + + + P F + + + LG+ T +C TGT K
Sbjct: 175 SASNPLGTAS---SSAKLTL--SEHEVPPFFDLKPVSVDLALGESGTFKCHVTGTAPIKI 229
Query: 123 RWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGT 182
W ++ REI G Y++ L +VT D G YTC A N G S+++ +
Sbjct: 230 TWAKDNREIRPGGNYKMTLVENTATLTVLKVTKGDAGQYTCYASNVAGKDSCSAQLGVQE 289
Query: 183 PPRIDRMPNALYI-PEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIII 241
PPR + I + ++T+ + G ++V K+ +Q +F+ + ++ ++
Sbjct: 290 PPRFIKKLEPSRIVKQDEHTRYECKIGGSPEIKVLWYKDETEIQESSKFRMSFVESVAVL 349
Query: 242 FIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLH 297
+ + ED+GDYT N++GS S + ++ + P P V + L
Sbjct: 350 EMYNLSVEDSGDYTCEAHNAAGSASSSTSLKVKEPPVFRKKPHPVETLKGADVHLE 405
Score = 161 bits (409), Expect = 2e-41
Identities = 55/236 (23%), Positives = 101/236 (42%), Gaps = 6/236 (2%)
Query: 1670 IAVNAIGKSEPSICTTPVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKC 1729
A N +G + + + + P F + + + LG+ T +C TGT K
Sbjct: 175 SASNPLGTAS---SSAKLTL--SEHEVPPFFDLKPVSVDLALGESGTFKCHVTGTAPIKI 229
Query: 1730 RWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGT 1789
W ++ REI G Y++ L +VT D G YTC A N G S+++ +
Sbjct: 230 TWAKDNREIRPGGNYKMTLVENTATLTVLKVTKGDAGQYTCYASNVAGKDSCSAQLGVQE 289
Query: 1790 PPRIDRMPNALYI-PEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIII 1848
PPR + I + ++T+ + G ++V K+ +Q +F+ + ++ ++
Sbjct: 290 PPRFIKKLEPSRIVKQDEHTRYECKIGGSPEIKVLWYKDETEIQESSKFRMSFVESVAVL 349
Query: 1849 FIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLH 1904
+ + ED+GDYT N++GS S + ++ + P P V + L
Sbjct: 350 EMYNLSVEDSGDYTCEAHNAAGSASSSTSLKVKEPPVFRKKPHPVETLKGADVHLE 405
Score = 154 bits (392), Expect = 4e-39
Identities = 51/202 (25%), Positives = 84/202 (41%), Gaps = 6/202 (2%)
Query: 477 AAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTY 536
A + P I PL + A QC + G P+ I+W K ++ + + + + +
Sbjct: 2 AMEPPYFIEPLEHVEAAIGEPITLQCKVDGTPEIRIAWYKEHTKLRSAPAYKMQFKNNVA 61
Query: 537 TLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPRFRD---TAYFDKGEN 593
+L+IN V D EY C+A N G ++ A L+I +PP F + G
Sbjct: 62 SLVINKVDHSDVGEYTCKAENSVGAVASSAVLVIKERK---LPPSFARKLKDVHETLGFP 118
Query: 594 VVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAPYRVVAEN 653
V + G +++WY+D E+++ + A L I Y A N
Sbjct: 119 VAFECRINGSEPLQVSWYKDGELLKDDANLQTSFIHNVATLQILQTDQSHVGQYNCSASN 178
Query: 654 DLGMDSAIVKIQISDRPDPPQF 675
LG S+ K+ +S+ PP F
Sbjct: 179 PLGTASSSAKLTLSEHEVPPFF 200
Score = 154 bits (391), Expect = 4e-39
Identities = 61/240 (25%), Positives = 106/240 (44%), Gaps = 9/240 (3%)
Query: 59 EFRIIAVNAIGKSEPSICTTPVKICEFVGGEKPDFIVPLKD-LVVPLGKLLTLQCEATGT 117
++ A N GK S V+ E P FI L+ +V + +C+ G+
Sbjct: 267 QYTCYASNVAGKDSCSAQLG-VQ-------EPPRFIKKLEPSRIVKQDEHTRYECKIGGS 318
Query: 118 PVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSR 177
P K W ++ EI +++R+ V L ++ D+GDYTCEA+N+ G A +S+
Sbjct: 319 PEIKVLWYKDETEIQESSKFRMSFVESVAVLEMYNLSVEDSGDYTCEAHNAAGSASSSTS 378
Query: 178 VKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDD 237
+K+ PP + P+ + +G + ++ G P +VS K+ R ++S ++K +
Sbjct: 379 LKVKEPPVFRKKPHPVETLKGADVHLECELQGTPPFQVSWHKDKRELRSGKKYKIMSENF 438
Query: 238 YIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLH 297
I I + D G+Y SN GS + +I + P D+S + L
Sbjct: 439 LTSIHILNVDSADIGEYQCKASNDVGSDTCVGSITLKAPPRFVKKLSDISTVVGEEVQLQ 498
Score = 154 bits (391), Expect = 4e-39
Identities = 61/240 (25%), Positives = 106/240 (44%), Gaps = 9/240 (3%)
Query: 1666 EFRIIAVNAIGKSEPSICTTPVKICEFVGGEKPDFIVPLKD-LVVPLGKLLTLQCEATGT 1724
++ A N GK S V+ E P FI L+ +V + +C+ G+
Sbjct: 267 QYTCYASNVAGKDSCSAQLG-VQ-------EPPRFIKKLEPSRIVKQDEHTRYECKIGGS 318
Query: 1725 PVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSR 1784
P K W ++ EI +++R+ V L ++ D+GDYTCEA+N+ G A +S+
Sbjct: 319 PEIKVLWYKDETEIQESSKFRMSFVESVAVLEMYNLSVEDSGDYTCEAHNAAGSASSSTS 378
Query: 1785 VKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDD 1844
+K+ PP + P+ + +G + ++ G P +VS K+ R ++S ++K +
Sbjct: 379 LKVKEPPVFRKKPHPVETLKGADVHLECELQGTPPFQVSWHKDKRELRSGKKYKIMSENF 438
Query: 1845 YIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLH 1904
I I + D G+Y SN GS + +I + P D+S + L
Sbjct: 439 LTSIHILNVDSADIGEYQCKASNDVGSDTCVGSITLKAPPRFVKKLSDISTVVGEEVQLQ 498
Score = 151 bits (383), Expect = 4e-38
Identities = 53/196 (27%), Positives = 95/196 (48%), Gaps = 3/196 (1%)
Query: 89 EKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRL 148
E P FI PL+ + +G+ +TLQC+ GTP + W + ++ S Y+++ V L
Sbjct: 4 EPPYFIEPLEHVEAAIGEPITLQCKVDGTPEIRIAWYKEHTKLRSAPAYKMQFKNNVASL 63
Query: 149 HFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKI---GTPPRIDRMPNALYIPEGDNTKVKI 205
N+V D G+YTC+A NSVG +S+ + I PP R ++ G +
Sbjct: 64 VINKVDHSDVGEYTCKAENSVGAVASSAVLVIKERKLPPSFARKLKDVHETLGFPVAFEC 123
Query: 206 FYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSV 265
G +P++VS K+G +++ D + + + + + I + + G Y + SN G+
Sbjct: 124 RINGSEPLQVSWYKDGELLKDDANLQTSFIHNVATLQILQTDQSHVGQYNCSASNPLGTA 183
Query: 266 SGTFTINITGLPGPPI 281
S + + ++ PP
Sbjct: 184 SSSAKLTLSEHEVPPF 199
Score = 151 bits (383), Expect = 4e-38
Identities = 53/196 (27%), Positives = 95/196 (48%), Gaps = 3/196 (1%)
Query: 1696 EKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRL 1755
E P FI PL+ + +G+ +TLQC+ GTP + W + ++ S Y+++ V L
Sbjct: 4 EPPYFIEPLEHVEAAIGEPITLQCKVDGTPEIRIAWYKEHTKLRSAPAYKMQFKNNVASL 63
Query: 1756 HFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKI---GTPPRIDRMPNALYIPEGDNTKVKI 1812
N+V D G+YTC+A NSVG +S+ + I PP R ++ G +
Sbjct: 64 VINKVDHSDVGEYTCKAENSVGAVASSAVLVIKERKLPPSFARKLKDVHETLGFPVAFEC 123
Query: 1813 FYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSV 1872
G +P++VS K+G +++ D + + + + + I + + G Y + SN G+
Sbjct: 124 RINGSEPLQVSWYKDGELLKDDANLQTSFIHNVATLQILQTDQSHVGQYNCSASNPLGTA 183
Query: 1873 SGTFTINITGLPGPPI 1888
S + + ++ PP
Sbjct: 184 SSSAKLTLSEHEVPPF 199
Score = 151 bits (382), Expect = 6e-38
Identities = 49/216 (22%), Positives = 96/216 (44%), Gaps = 9/216 (4%)
Query: 59 EFRIIAVNAIGKSEPSICTTPVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTP 118
++ A NA G + +T +K+ E P F + G + L+CE GTP
Sbjct: 361 DYTCEAHNAAGSAS---SSTSLKV-----KEPPVFRKKPHPVETLKGADVHLECELQGTP 412
Query: 119 VPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRV 178
+ W ++ RE+ SG +Y++ + + +H V D G+Y C+A N VG +
Sbjct: 413 PFQVSWHKDKRELRSGKKYKIMSENFLTSIHILNVDSADIGEYQCKASNDVGSDTCVGSI 472
Query: 179 KIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNG-RVVQSDDRFKFTVLDD 237
+ PPR + + + G+ +++ G +P+ V+ K+ +V+ D + ++
Sbjct: 473 TLKAPPRFVKKLSDISTVVGEEVQLQATIEGAEPISVAWFKDKGEIVRESDNIWISYSEN 532
Query: 238 YIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINI 273
+ +AG YT + N +G+ T+++
Sbjct: 533 IATLQFSRAEPANAGKYTCQIKNEAGTQECFATLSV 568
Score = 151 bits (382), Expect = 6e-38
Identities = 49/216 (22%), Positives = 96/216 (44%), Gaps = 9/216 (4%)
Query: 1666 EFRIIAVNAIGKSEPSICTTPVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTP 1725
++ A NA G + +T +K+ E P F + G + L+CE GTP
Sbjct: 361 DYTCEAHNAAGSAS---SSTSLKV-----KEPPVFRKKPHPVETLKGADVHLECELQGTP 412
Query: 1726 VPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRV 1785
+ W ++ RE+ SG +Y++ + + +H V D G+Y C+A N VG +
Sbjct: 413 PFQVSWHKDKRELRSGKKYKIMSENFLTSIHILNVDSADIGEYQCKASNDVGSDTCVGSI 472
Query: 1786 KIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNG-RVVQSDDRFKFTVLDD 1844
+ PPR + + + G+ +++ G +P+ V+ K+ +V+ D + ++
Sbjct: 473 TLKAPPRFVKKLSDISTVVGEEVQLQATIEGAEPISVAWFKDKGEIVRESDNIWISYSEN 532
Query: 1845 YIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINI 1880
+ +AG YT + N +G+ T+++
Sbjct: 533 IATLQFSRAEPANAGKYTCQIKNEAGTQECFATLSV 568
Score = 149 bits (379), Expect = 2e-37
Identities = 49/218 (22%), Positives = 94/218 (43%), Gaps = 8/218 (3%)
Query: 63 IAVNAIGKSEPSICTTPVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKC 122
A N++G + + I P F LKD+ LG + +C G+ +
Sbjct: 79 KAENSVGAVA---SSAVLVI--KERKLPPSFARKLKDVHETLGFPVAFECRINGSEPLQV 133
Query: 123 RWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKI-- 180
W ++G + A + V L + G Y C A N +G A +S+++ +
Sbjct: 134 SWYKDGELLKDDANLQTSFIHNVATLQILQTDQSHVGQYNCSASNPLGTASSSAKLTLSE 193
Query: 181 -GTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYI 239
PP D P ++ + G++ K G P++++ K+ R ++ +K T++++
Sbjct: 194 HEVPPFFDLKPVSVDLALGESGTFKCHVTGTAPIKITWAKDNREIRPGGNYKMTLVENTA 253
Query: 240 IIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLP 277
+ + ++ K DAG YT SN +G S + + + P
Sbjct: 254 TLTVLKVTKGDAGQYTCYASNVAGKDSCSAQLGVQEPP 291
Score = 149 bits (379), Expect = 2e-37
Identities = 49/218 (22%), Positives = 94/218 (43%), Gaps = 8/218 (3%)
Query: 1670 IAVNAIGKSEPSICTTPVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKC 1729
A N++G + + I P F LKD+ LG + +C G+ +
Sbjct: 79 KAENSVGAVA---SSAVLVI--KERKLPPSFARKLKDVHETLGFPVAFECRINGSEPLQV 133
Query: 1730 RWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKI-- 1787
W ++G + A + V L + G Y C A N +G A +S+++ +
Sbjct: 134 SWYKDGELLKDDANLQTSFIHNVATLQILQTDQSHVGQYNCSASNPLGTASSSAKLTLSE 193
Query: 1788 -GTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYI 1846
PP D P ++ + G++ K G P++++ K+ R ++ +K T++++
Sbjct: 194 HEVPPFFDLKPVSVDLALGESGTFKCHVTGTAPIKITWAKDNREIRPGGNYKMTLVENTA 253
Query: 1847 IIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLP 1884
+ + ++ K DAG YT SN +G S + + + P
Sbjct: 254 TLTVLKVTKGDAGQYTCYASNVAGKDSCSAQLGVQEPP 291
Score = 139 bits (351), Expect = 6e-34
Identities = 77/444 (17%), Positives = 149/444 (33%), Gaps = 65/444 (14%)
Query: 1790 PPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIF 1849
PP + G+ ++ G + ++ K ++S +K ++ +
Sbjct: 5 PPYFIEPLEHVEAAIGEPITLQCKVDGTPEIRIAWYKEHTKLRSAPAYKMQFKNNVASLV 64
Query: 1850 IKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPI---GPLDVSEITKHT----CT 1902
I ++ D G+YT NS G+V+ + + I PP DV E C
Sbjct: 65 INKVDHSDVGEYTCKAENSVGAVASSAVLVIKERKLPPSFARKLKDVHETLGFPVAFECR 124
Query: 1903 LHWNPP-----KYDGGLKVTHYVVERRDISMPHWICISTTCHDTTFIVQGLTEGQEYLFH 1957
++ + P DG L + + ++ S + T + + ++
Sbjct: 125 INGSEPLQVSWYKDGEL-----LKDDANLQ------TSFIHNVATLQILQTDQSHVGQYN 173
Query: 1958 VMAVNENG---MGPPL----EGINPIKAKSPYDKPSPPGIPVV--TQVGGD-FVNLSW-- 2005
A N G L + P P G V G + ++W
Sbjct: 174 CSASNPLGTASSSAKLTLSEHEVPPFFDLKPVSVDLALGESGTFKCHVTGTAPIKITWAK 233
Query: 2006 -DKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNE 2064
++ + GG +++ + + + +G ++ YA N
Sbjct: 234 DNREIRPGG---------NYKMTLVENTAT---------LTVLKVTKGDAGQYTCYASNV 275
Query: 2065 AGLSLPSSASNSVQIKDPMAAKAPEIIVPLR-NANAIQNHNAQFQCTITGCPKPTISWLK 2123
AG S S + +++P P I L + Q+ + +++C I G P+ + W K
Sbjct: 276 AG---KDSCSAQLGVQEP-----PRFIKKLEPSRIVKQDEHTRYECKIGGSPEIKVLWYK 327
Query: 2124 GSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKF 2183
EI S++ + L + ++ D+ +Y C A N G S+ L + P F
Sbjct: 328 DETEIQESSKFRMSFVESVAVLEMYNLSVEDSGDYTCEAHNAAGSASSSTSLKVKEPPVF 387
Query: 2184 NVPPRFRDTAYFESDVVVVVCVCF 2207
P + V + C
Sbjct: 388 RKKP--HPVETLKGADVHLECELQ 409
Score = 112 bits (281), Expect = 3e-25
Identities = 33/149 (22%), Positives = 62/149 (41%), Gaps = 10/149 (6%)
Query: 2056 EFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCP 2115
++ A N AG + S+S S+++K+P P ++ + +C + G P
Sbjct: 361 DYTCEAHNAAGSA---SSSTSLKVKEP-----PVFRKKPHPVETLKGADVHLECELQGTP 412
Query: 2116 KPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAEL 2175
+SW K RE+ ++ I +E ++ I +V D EY C+A N G + +
Sbjct: 413 PFQVSWHKDKRELRSGKKYKIMSENFLTSIHILNVDSADIGEYQCKASNDVGSDTCVGSI 472
Query: 2176 IIMTAPKFNVPPRFRDTAYFESDVVVVVC 2204
+ P+F D + + V +
Sbjct: 473 TLKAPPRFVKKL--SDISTVVGEEVQLQA 499
Score = 102 bits (256), Expect = 4e-22
Identities = 80/484 (16%), Positives = 138/484 (28%), Gaps = 92/484 (19%)
Query: 1064 VLWVSEGKSIG-SERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPWSSS 1122
V W +G+ + T+ + + I ++H ++ A N G +SS
Sbjct: 133 VSWYKDGELLKDDANLQTSFIHNVATLQILQ----TDQSHVGQYNCSASNPLGT---ASS 185
Query: 1123 SDIIMCCAPPCAPKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGR 1182
S + P + + GE T +G W + E+ P G
Sbjct: 186 SAKLTLSEHEVPPFFDLKP--VSVDLALGESGTFKCHVTGTAPIKITWAKDNREIRPGGN 243
Query: 1183 IKFETSENQTIYRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYVVDKPSPPQGPLDVSD 1242
K EN D+G YT N G DS S ++ V + P +
Sbjct: 244 YKMTLVENTATLTVLKV-TKGDAGQYTCYASNVAGKDSCSAQLGVQEPPRFIKKLEPSRI 302
Query: 1243 ITPES-----CSLSWKPPLDDGGSPITNYVVEKYESATGFWSK----LSSFVRSPAYDVF 1293
+ + C + GSP W K + + V
Sbjct: 303 VKQDEHTRYECKIG--------GSPEIKV----------LWYKDETEIQESSKFRMSFVE 344
Query: 1294 G--------LETNRQYRFRVRAENQYGVSEPLELDNSITAKFPFTVPDPP---GQPQIVD 1342
L + A N G S ++ V +PP +P V+
Sbjct: 345 SVAVLEMYNLSVEDSGDYTCEAHNAAG---------SASSSTSLKVKEPPVFRKKPHPVE 395
Query: 1343 -WDTNNATL------------MWDRPRTDGGSKIQGYKMLLKTPTGELPTTIWSKIRPTS 1389
+ L W + +++ K L + +
Sbjct: 396 TLKGADVHLECELQGTPPFQVSWHK----DKRELRSGKKYKIMSENFLTSIHILNVDSAD 451
Query: 1390 STVYCKDTTMNSSNSEPGKQ--SGPVIVEEQP---NKPVMDLSGVRDITVKAGEDFSIHV 1444
Y +SN G G + ++ P K DI+ GE+ +
Sbjct: 452 IGEY----QCKASNDV-GSDTCVGSITLKAPPRFVKKL-------SDISTVVGEEVQLQA 499
Query: 1445 PFMAFPQPAAFWFANDSIIDDSDTRVHKQLTMNSASLVVKNSQRSDGGQYRLQLKNPAGF 1504
+ WF + I + + N A+L ++ ++ G+Y Q+KN AG
Sbjct: 500 TIEGAEPISVAWFKDKGEIVRESDNIWISYSENIATLQFSRAEPANAGKYTCQIKNEAGT 559
Query: 1505 DTAT 1508
Sbjct: 560 QECF 563
Score = 94.5 bits (235), Expect = 1e-19
Identities = 32/120 (26%), Positives = 52/120 (43%), Gaps = 6/120 (5%)
Query: 2084 AAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTY 2143
A + P I PL + A QC + G P+ I+W K ++ + + + + +
Sbjct: 2 AMEPPYFIEPLEHVEAAIGEPITLQCKVDGTPEIRIAWYKEHTKLRSAPAYKMQFKNNVA 61
Query: 2144 TLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPRFRDTAYFESDVVVVV 2203
+L+IN V D EY C+A N G ++ A L+I +PP F DV +
Sbjct: 62 SLVINKVDHSDVGEYTCKAENSVGAVASSAVLVIKERK---LPPSFARK---LKDVHETL 115
Score = 94.1 bits (234), Expect = 2e-19
Identities = 29/124 (23%), Positives = 51/124 (41%), Gaps = 9/124 (7%)
Query: 2056 EFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCP 2115
E++ A N+ G + S+ +K P P + L + + + Q Q TI G
Sbjct: 454 EYQCKASNDVG---SDTCVGSITLKAP-----PRFVKKLSDISTVVGEEVQLQATIEGAE 505
Query: 2116 KPTISWLKGSREITP-SARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAE 2174
+++W K EI S I + TL + +A +Y C+ N+ G + A
Sbjct: 506 PISVAWFKDKGEIVRESDNIWISYSENIATLQFSRAEPANAGKYTCQIKNEAGTQECFAT 565
Query: 2175 LIIM 2178
L ++
Sbjct: 566 LSVL 569
Score = 91.4 bits (227), Expect = 1e-18
Identities = 71/475 (14%), Positives = 136/475 (28%), Gaps = 72/475 (15%)
Query: 1064 VLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPWSSSS 1123
+ W E + S QF + + + + + E+ A N+ G +SS
Sbjct: 37 IAWYKEHTKLRSAPAYKMQFKNNVASLV---INKVDHSDVGEYTCKAENSVGA---VASS 90
Query: 1124 DIIMCCAPPCAPKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRI 1183
+++ P L +D+ G +G W +G+ + D +
Sbjct: 91 AVLVIKERKLPPSFARKL--KDVHETLGFPVAFECRINGSEPLQVSWYKDGELLKDDANL 148
Query: 1184 KFETSENQTIYRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYVVDKPSPPQ---GPLDV 1240
+ N + + G Y N +G+ S+S K+ + + PP P+ V
Sbjct: 149 QTSFIHNVATLQILQT-DQSHVGQYNCSASNPLGTASSSAKLTLSEHEVPPFFDLKPVSV 207
Query: 1241 SDITPES----CSLSWKPPLD-----DGGSPITNYVVEKYESATGFWSKLSSFVRSPAYD 1291
ES C ++ P+ D + + + A
Sbjct: 208 DLALGESGTFKCHVTGTAPIKITWAKDNREIRPGGNYKMTLVENTATLTVLKVTKGDA-- 265
Query: 1292 VFGLETNRQYRFRVRAENQYGVSE----------PLELDNSITAKFPFTVPDPPGQPQIV 1341
G ++ A N G P K + +
Sbjct: 266 --G-------QYTCYASNVAGKDSCSAQLGVQEPP-----RFIKKLEPSRIVKQDEHTRY 311
Query: 1342 DWDTN---NATLMWDRPRTDGGSKIQ---GYKMLLKTPTGELPTTIWSKIRPTSSTVYCK 1395
+ ++W + ++IQ ++M L + + S Y
Sbjct: 312 ECKIGGSPEIKVLWYK----DETEIQESSKFRMSFVESVAVL--EM-YNLSVEDSGDY-- 362
Query: 1396 DTTMNSSNSEPG--KQSGPVIVEEQPNKPVMDLSGVRDITVKAGEDFSIHVPFMAFPQPA 1453
T + N+ G S + V+E PV + G D + P
Sbjct: 363 --TCEAHNAA-GSASSSTSLKVKE---PPVF-RKKPHPVETLKGADVHLECELQGTPPFQ 415
Query: 1454 AFWFANDSIIDDSDTRVHKQLTMNSASLVVKNSQRSDGGQYRLQLKNPAGFDTAT 1508
W + + + S+ + N +D G+Y+ + N G DT
Sbjct: 416 VSWHKDKRELRSGK-KYKIMSENFLTSIHILNVDSADIGEYQCKASNDVGSDTCV 469
Score = 88.7 bits (220), Expect = 8e-18
Identities = 69/415 (16%), Positives = 120/415 (28%), Gaps = 83/415 (20%)
Query: 1134 APKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQTI 1193
P L + GE T+ G P+ W ++ K + N
Sbjct: 5 PPYFIEPLE--HVEAAIGEPITLQCKVDGTPEIRIAWYKEHTKLRSAPAYKMQFKNNVAS 62
Query: 1194 YRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYVVDKPSPP---QGPLDVSDITPESCSL 1250
+D G YT + N+VG+ ++S + + ++ PP + DV + +
Sbjct: 63 LVINKVDH-SDVGEYTCKAENSVGAVASSAVLVIKERKLPPSFARKLKDVHETLGFPVAF 121
Query: 1251 SWKPPLDDGGSPITNYVVEKYESATGFWSKLSSFVR-SPAYDVFGLETNRQYRF------ 1303
+ GS W K ++ + +
Sbjct: 122 ECRIN----GSEPLQV----------SWYKDGELLKDDANLQTSFIHNVATLQILQTDQS 167
Query: 1304 -----RVRAENQYGVSEPLELDNSITAKFPFTVPDPPGQPQIVDWDTN-------NATLM 1351
A N G + + T+ + P + + T
Sbjct: 168 HVGQYNCSASNPLGTAS---------SSAKLTLSEHEVPPFFDLKPVSVDLALGESGTFK 218
Query: 1352 ------------WDRPRTDGG--SKIQGYKMLLKTPTGELPTTIWSKIRPTSSTVYCKDT 1397
W + D YKM L T L T+ K+ + Y
Sbjct: 219 CHVTGTAPIKITWAK---DNREIRPGGNYKMTLVENTATL--TV-LKVTKGDAGQY---- 268
Query: 1398 TMNSSNSEPGK--QSGPVIVEEQPN--KPVMDLSGVRDITVKAGEDFSIHVPFMAFPQPA 1453
T +SN GK S + V+E P K + VK E P+
Sbjct: 269 TCYASNVA-GKDSCSAQLGVQEPPRFIKKLEP-----SRIVKQDEHTRYECKIGGSPEIK 322
Query: 1454 AFWFANDSIIDDSDTRVHKQLTMNSASLVVKNSQRSDGGQYRLQLKNPAGFDTAT 1508
W+ +++ I +S + + A L + N D G Y + N AG +++
Sbjct: 323 VLWYKDETEIQESS-KFRMSFVESVAVLEMYNLSVEDSGDYTCEAHNAAGSASSS 376
Score = 62.9 bits (153), Expect = 9e-10
Identities = 26/121 (21%), Positives = 45/121 (37%), Gaps = 10/121 (8%)
Query: 1110 AVNAAGQGPWSSSSDIIMCCAPPCAPKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPI 1169
A N G S + P+ L D++ + GEE + G +
Sbjct: 459 ASNDVGSDTCVGSITLK------APPRFVKKL--SDISTVVGEEVQLQATIEGAEPISVA 510
Query: 1170 WTVNGDEVSPDG-RIKFETSENQTIYRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYVV 1228
W + E+ + I SEN + A+ A ++G YT Q+ N G+ + V+
Sbjct: 511 WFKDKGEIVRESDNIWISYSENIATLQFSRAEPA-NAGKYTCQIKNEAGTQECFATLSVL 569
Query: 1229 D 1229
+
Sbjct: 570 E 570
Score = 56.7 bits (137), Expect = 7e-08
Identities = 20/103 (19%), Positives = 32/103 (31%), Gaps = 2/103 (1%)
Query: 1408 KQSGPVIVEEQPNKPVMDLSGVRDITVKAGEDFSIHVPFMAFPQPAAFWFANDSIIDDSD 1467
S + + E P + + GE + W ++ I
Sbjct: 184 SSSAKLTLSEHEVPPFF-DLKPVSVDLALGESGTFKCHVTGTAPIKITWAKDNREIRPGG 242
Query: 1468 TRVHKQLTMNSASLVVKNSQRSDGGQYRLQLKNPAGFDTATLH 1510
L N+A+L V + D GQY N AG D+ +
Sbjct: 243 -NYKMTLVENTATLTVLKVTKGDAGQYTCYASNVAGKDSCSAQ 284
Score = 54.8 bits (132), Expect = 3e-07
Identities = 19/111 (17%), Positives = 42/111 (37%), Gaps = 4/111 (3%)
Query: 1413 VIVEEQPNKPVMDLSGVRDITVKAGEDFSIHVPFMAFPQPAAFWFANDSIIDDSDTRVHK 1472
++++E+ P ++D+ G + W+ + ++ D +
Sbjct: 93 LVIKERKLPPSF-ARKLKDVHETLGFPVAFECRINGSEPLQVSWYKDGELLKDDA-NLQT 150
Query: 1473 QLTMNSASLVVKNSQRSDGGQYRLQLKNPAGFDTATLHSRLRTLPDSVNPR 1523
N A+L + + +S GQY NP G +++ ++L V P
Sbjct: 151 SFIHNVATLQILQTDQSHVGQYNCSASNPLGTASSS--AKLTLSEHEVPPF 199
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin
domain, fibronectin type III repeat, CE adhesion; 1.80A
{Homo sapiens}
Length = 215
Score = 192 bits (489), Expect = 1e-55
Identities = 49/214 (22%), Positives = 75/214 (35%), Gaps = 12/214 (5%)
Query: 555 AVNKGGVKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDN 614
A + M APK P Y +G V + YP I+W+RD
Sbjct: 1 ATYAAASSALVPRGSHMYAPKLQGPV----AVYTWEGNQVNITCEVFAYPSATISWFRDG 56
Query: 615 EVIESGGHFHV--ETSERHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQISDRPDP 672
+++ S + ++ + + L + S D Y A N +G +S + +D P
Sbjct: 57 QLLPSSNYSNIKIYNTPSASYLEVTPDSENDFGNYNCTAVNRIGQESLEFILVQADTPSS 116
Query: 673 PQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSWIRV-----GNTRFTTM 727
P VE + + + P GG I Y E R W + +
Sbjct: 117 PSIDQVEPYS-STAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASMEGIV 175
Query: 728 AITGLSPGHQYEFRVYAENVYGRSDPSTTSDLIT 761
I GL P Y R+ A N G + S S+ T
Sbjct: 176 TIVGLKPETTYAVRLAALNGKGLGEISAASEFKT 209
Score = 169 bits (429), Expect = 1e-47
Identities = 40/197 (20%), Positives = 60/197 (30%), Gaps = 12/197 (6%)
Query: 1134 APKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDG--RIKFETSENQ 1191
APK+ + G + IT P T W +G + IK + +
Sbjct: 19 APKLQGP---VAVYTWEGNQVNITCEVFAYPSATISWFRDGQLLPSSNYSNIKIYNTPSA 75
Query: 1192 TIYRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYVVDKPSPPQGPLDVSDITPESCSLS 1251
+ D G+Y VN +G +S + D PS P + + +
Sbjct: 76 SYLEVTPDSE-NDFGNYNCTAVNRIGQESLEFILVQADTPSSPSID--QVEPYSSTAQVQ 132
Query: 1252 WKPPLDDGGSPITNYVVEKYESA----TGFWSKLSSFVRSPAYDVFGLETNRQYRFRVRA 1307
+ P GG PI Y E W + GL+ Y R+ A
Sbjct: 133 FDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASMEGIVTIVGLKPETTYAVRLAA 192
Query: 1308 ENQYGVSEPLELDNSIT 1324
N G+ E T
Sbjct: 193 LNGKGLGEISAASEFKT 209
Score = 155 bits (393), Expect = 9e-43
Identities = 38/212 (17%), Positives = 71/212 (33%), Gaps = 15/212 (7%)
Query: 159 GDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLT 218
Y + V R P++ + P A+Y EG+ + +S
Sbjct: 1 ATYAAASSALVP------RGSHMYAPKL-QGPVAVYTWEGNQVNITCEVFAYPSATISWF 53
Query: 219 KNGRVVQSDDRFKFTVL--DDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGL 276
++G+++ S + + + + + D G+Y N G S F +
Sbjct: 54 RDGQLLPSSNYSNIKIYNTPSASYLEVTPDSENDFGNYNCTAVNRIGQESLEFILVQADT 113
Query: 277 PGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDIS----MPHWICISTTCH 332
P P +D E T + ++ P+ GG+ + Y E R + W
Sbjct: 114 PSSP--SIDQVEPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASM 171
Query: 333 DTTFIVQGLTEGQEYLFHVMAVNENGMGPPLE 364
+ + GL Y + A+N G+G
Sbjct: 172 EGIVTIVGLKPETTYAVRLAALNGKGLGEISA 203
Score = 155 bits (393), Expect = 9e-43
Identities = 38/212 (17%), Positives = 71/212 (33%), Gaps = 15/212 (7%)
Query: 1766 GDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLT 1825
Y + V R P++ + P A+Y EG+ + +S
Sbjct: 1 ATYAAASSALVP------RGSHMYAPKL-QGPVAVYTWEGNQVNITCEVFAYPSATISWF 53
Query: 1826 KNGRVVQSDDRFKFTVL--DDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGL 1883
++G+++ S + + + + + D G+Y N G S F +
Sbjct: 54 RDGQLLPSSNYSNIKIYNTPSASYLEVTPDSENDFGNYNCTAVNRIGQESLEFILVQADT 113
Query: 1884 PGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDIS----MPHWICISTTCH 1939
P P +D E T + ++ P+ GG+ + Y E R + W
Sbjct: 114 PSSP--SIDQVEPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASM 171
Query: 1940 DTTFIVQGLTEGQEYLFHVMAVNENGMGPPLE 1971
+ + GL Y + A+N G+G
Sbjct: 172 EGIVTIVGLKPETTYAVRLAALNGKGLGEISA 203
Score = 124 bits (313), Expect = 5e-32
Identities = 44/293 (15%), Positives = 81/293 (27%), Gaps = 85/293 (29%)
Query: 1401 SSNSEPGKQSGPVIVEEQPNKPVMDLSGVRDITVKAGEDFSIHVPFMAFPQPAAFWFAND 1460
++ + P P L G + G +I A+P WF +
Sbjct: 1 ATYAAASSALVPRGSHMYA--PK--LQGPVAVYTWEGNQVNITCEVFAYPSATISWFRDG 56
Query: 1461 SIID-DSDTRVHKQLTMNSASLVVKNSQRSDGGQYRLQLKNPAGFDTATLHSRLRTLPDS 1519
++ + + + T +++ L V +D G Y N G ++
Sbjct: 57 QLLPSSNYSNIKIYNTPSASYLEVTPDSENDFGNYNCTAVNRIGQESLE----------- 105
Query: 1520 VNPRCHLPSSTSKERPKFPTHPNHQPWLKWARASLTSKGVDSTEDSISLVWSKPRHDGGS 1579
L + P P+ V+ + + + +P GG
Sbjct: 106 ----FIL---VQADTPSSPSIDQ----------------VEPYSSTAQVQFDEPEATGGV 142
Query: 1580 PIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEGKSIGSERGSTAQFLEREVGGA 1639
PI +Y E R + ++ W W ++
Sbjct: 143 PILKYKAEWRAVGEEVWHS--------------KWYDAKEASM----------------- 171
Query: 1640 IWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPS----ICTTPVK 1688
E +++ L Y R+ A+N G E S T PV+
Sbjct: 172 -----------EGIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQPVQ 213
Score = 99.9 bits (249), Expect = 2e-23
Identities = 21/115 (18%), Positives = 40/115 (34%), Gaps = 9/115 (7%)
Query: 890 DEMVLIFEVLDRPHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNS---- 945
+ + I D P P + ++ + + + P GG I Y E +
Sbjct: 102 ESLEFILVQADTPSSPSIDQVEPYS-STAQVQFDEPEATGGVPILKYKAEWRAVGEEVWH 160
Query: 946 TVWTKVSSYVTTPFVRVRNLAIGSTYEFRVMAENQYGLSKPALTID----PIKAK 996
+ W V + L +TY R+ A N GL + + + P++ +
Sbjct: 161 SKWYDAKEASMEGIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQPVQGE 215
Score = 96.4 bits (240), Expect = 3e-22
Identities = 26/96 (27%), Positives = 34/96 (35%), Gaps = 4/96 (4%)
Query: 376 DKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAI---C 432
D PS P I V + +D+P GG I Y + VG + W
Sbjct: 112 DTPSSPSIDQVE-PYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEAS 170
Query: 433 APSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASN 468
+ I L Y R+ A N GL S+AS
Sbjct: 171 MEGIVTIVGLKPETTYAVRLAALNGKGLGEISAASE 206
Score = 96.4 bits (240), Expect = 3e-22
Identities = 26/96 (27%), Positives = 34/96 (35%), Gaps = 4/96 (4%)
Query: 1983 DKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAI---C 2039
D PS P I V + +D+P GG I Y + VG + W
Sbjct: 112 DTPSSPSIDQVE-PYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEAS 170
Query: 2040 APSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASN 2075
+ I L Y R+ A N GL S+AS
Sbjct: 171 MEGIVTIVGLKPETTYAVRLAALNGKGLGEISAASE 206
Score = 89.5 bits (222), Expect = 7e-20
Identities = 23/127 (18%), Positives = 42/127 (33%), Gaps = 30/127 (23%)
Query: 1000 DVPGAPGAPKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDT 1059
D P +P + V+ + + + +P GG PI +Y E R + ++ W
Sbjct: 112 DTPSSPSIDQ-VEPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHS--------- 161
Query: 1060 SLKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPW 1119
W ++ + L Y R+ A+N G G
Sbjct: 162 -----KWYDAKEASMEGI---------------VTIVGLKPETTYAVRLAALNGKGLGEI 201
Query: 1120 SSSSDII 1126
S++S+
Sbjct: 202 SAASEFK 208
Score = 81.4 bits (201), Expect = 4e-17
Identities = 41/211 (19%), Positives = 69/211 (32%), Gaps = 32/211 (15%)
Query: 463 PSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREIT 522
+++S V M A P++ P + + C + P TISW + + +
Sbjct: 4 AAASSALVPRGSHMYA--PKLQGP-VAVYTWEGNQVNITCEVFAYPSATISWFRDGQLLP 60
Query: 523 PSARHH--IFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPP 580
S + I+ L + D Y C AVN+ G +S + L+ P + P
Sbjct: 61 SSNYSNIKIYNTPSASYLEVTPDSENDFGNYNCTAVNRIGQESLEFILVQADTP--SSPS 118
Query: 581 RFRDTAYFDKGENVVVKI---------PFTGYPKPKITWYRDNEVIESGGHFHVETSERH 631
+ Y V+ P Y K W E + + + +
Sbjct: 119 IDQVEPY---SSTAQVQFDEPEATGGVPILKY---KAEWRAVGEEVWHSKWYDAKEASME 172
Query: 632 AILTIRDASNVDTAPY-----RVVAENDLGM 657
I+TI P R+ A N G+
Sbjct: 173 GIVTIVGLK-----PETTYAVRLAALNGKGL 198
Score = 79.9 bits (197), Expect = 1e-16
Identities = 19/111 (17%), Positives = 35/111 (31%), Gaps = 3/111 (2%)
Query: 76 CTTPVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSG- 134
+ + P P + G + + CE P W R+G+ + S
Sbjct: 5 AASSALVPRGSHMYAPKLQGP-VAVYTWEGNQVNITCEVFAYPSATISWFRDGQLLPSSN 63
Query: 135 -ARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPP 184
+ ++ L ++ D G+Y C A N +G + P
Sbjct: 64 YSNIKIYNTPSASYLEVTPDSENDFGNYNCTAVNRIGQESLEFILVQADTP 114
Score = 79.9 bits (197), Expect = 1e-16
Identities = 19/111 (17%), Positives = 35/111 (31%), Gaps = 3/111 (2%)
Query: 1683 CTTPVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSG- 1741
+ + P P + G + + CE P W R+G+ + S
Sbjct: 5 AASSALVPRGSHMYAPKLQGP-VAVYTWEGNQVNITCEVFAYPSATISWFRDGQLLPSSN 63
Query: 1742 -ARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPP 1791
+ ++ L ++ D G+Y C A N +G + P
Sbjct: 64 YSNIKIYNTPSASYLEVTPDSENDFGNYNCTAVNRIGQESLEFILVQADTP 114
Score = 76.8 bits (189), Expect = 1e-15
Identities = 26/121 (21%), Positives = 44/121 (36%), Gaps = 8/121 (6%)
Query: 2070 PSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREIT 2129
+++S V M A P++ P + + C + P TISW + + +
Sbjct: 4 AAASSALVPRGSHMYA--PKLQGP-VAVYTWEGNQVNITCEVFAYPSATISWFRDGQLLP 60
Query: 2130 PSARHH--IFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPP 2187
S + I+ L + D Y C AVN+ G +S + L+ P P
Sbjct: 61 SSNYSNIKIYNTPSASYLEVTPDSENDFGNYNCTAVNRIGQESLEFILVQADTPS---SP 117
Query: 2188 R 2188
Sbjct: 118 S 118
Score = 62.1 bits (151), Expect = 2e-10
Identities = 18/68 (26%), Positives = 26/68 (38%), Gaps = 7/68 (10%)
Query: 21 CYIIERREVGGAIWLKCNDY---NVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPS--- 74
Y E R VG +W +E +++ L Y R+ A+N G E S
Sbjct: 146 KYKAEWRAVGEEVWHSKWYDAKEASMEGIVTIVGLKPETTYAVRLAALNGKGLGEISAAS 205
Query: 75 -ICTTPVK 81
T PV+
Sbjct: 206 EFKTQPVQ 213
Score = 49.4 bits (118), Expect = 3e-06
Identities = 19/96 (19%), Positives = 32/96 (33%), Gaps = 11/96 (11%)
Query: 1302 RFRVRAENQYGVSEPLELDNSITAKFPFTVPDPPGQPQ--IVDWDTNNATLMWDRPRTDG 1359
+ A N+ G + +F D P P V+ ++ A + +D P G
Sbjct: 90 NYNCTAVNRIG---------QESLEFILVQADTPSSPSIDQVEPYSSTAQVQFDEPEATG 140
Query: 1360 GSKIQGYKMLLKTPTGELPTTIWSKIRPTSSTVYCK 1395
G I YK + E+ + W + S
Sbjct: 141 GVPILKYKAEWRAVGEEVWHSKWYDAKEASMEGIVT 176
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein,
serine/threonine-protein KI LIMB-girdle muscular
dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB:
2j8o_A 2ill_A
Length = 197
Score = 191 bits (486), Expect = 2e-55
Identities = 64/197 (32%), Positives = 92/197 (46%), Gaps = 5/197 (2%)
Query: 477 AAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIF--AEGD 534
A AP LRN N NA C +TG PKP + W + +EI + +G
Sbjct: 1 GAMAPHFKEELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGG 60
Query: 535 TYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPRFRD--TAYFDKGE 592
+ LII SV DA Y RA N+GG S A L + K ++P + +GE
Sbjct: 61 YHQLIIASVTDDDATVYQVRATNQGGSVSGTASLEVEVPAKIHLPKTLEGMGAVHALRGE 120
Query: 593 NVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSERHAILT-IRDASNVDTAPYRVVA 651
V +KIPF+G P P ITW + ++I++ GH+ V + L D Y V A
Sbjct: 121 VVSIKIPFSGKPDPVITWQKGQDLIDNNGHYQVIVTRSFTSLVFPNGVERKDAGFYVVCA 180
Query: 652 ENDLGMDSAIVKIQISD 668
+N G+D V++ ++D
Sbjct: 181 KNRFGIDQKTVELDVAD 197
Score = 152 bits (386), Expect = 6e-42
Identities = 50/196 (25%), Positives = 87/196 (44%), Gaps = 8/196 (4%)
Query: 87 GGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREI-SSGARYRV-ETAGG 144
G P F L++L V TL C+ TG P P +W R G+EI + G +YR+ E GG
Sbjct: 1 GAMAPHFKEELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGG 60
Query: 145 VFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKI-----GTPPRIDRMPNALYIPEGD 199
+L VTD D Y A N G ++ +++ P+ A++ G+
Sbjct: 61 YHQLIIASVTDDDATVYQVRATNQGGSVSGTASLEVEVPAKIHLPKTLEGMGAVHALRGE 120
Query: 200 NTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDD-YIIIFIKEIRKEDAGDYTVNL 258
+KI ++G ++ K ++ ++ ++ V ++F + ++DAG Y V
Sbjct: 121 VVSIKIPFSGKPDPVITWQKGQDLIDNNGHYQVIVTRSFTSLVFPNGVERKDAGFYVVCA 180
Query: 259 SNSSGSVSGTFTINIT 274
N G T +++
Sbjct: 181 KNRFGIDQKTVELDVA 196
Score = 152 bits (386), Expect = 6e-42
Identities = 50/196 (25%), Positives = 87/196 (44%), Gaps = 8/196 (4%)
Query: 1694 GGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREI-SSGARYRV-ETAGG 1751
G P F L++L V TL C+ TG P P +W R G+EI + G +YR+ E GG
Sbjct: 1 GAMAPHFKEELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGG 60
Query: 1752 VFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKI-----GTPPRIDRMPNALYIPEGD 1806
+L VTD D Y A N G ++ +++ P+ A++ G+
Sbjct: 61 YHQLIIASVTDDDATVYQVRATNQGGSVSGTASLEVEVPAKIHLPKTLEGMGAVHALRGE 120
Query: 1807 NTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDD-YIIIFIKEIRKEDAGDYTVNL 1865
+KI ++G ++ K ++ ++ ++ V ++F + ++DAG Y V
Sbjct: 121 VVSIKIPFSGKPDPVITWQKGQDLIDNNGHYQVIVTRSFTSLVFPNGVERKDAGFYVVCA 180
Query: 1866 SNSSGSVSGTFTINIT 1881
N G T +++
Sbjct: 181 KNRFGIDQKTVELDVA 196
Score = 118 bits (298), Expect = 3e-30
Identities = 39/126 (30%), Positives = 52/126 (41%), Gaps = 5/126 (3%)
Query: 2084 AAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIF--AEGD 2141
A AP LRN N NA C +TG PKP + W + +EI + +G
Sbjct: 1 GAMAPHFKEELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGG 60
Query: 2142 TYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPP---RFRDTAYFESD 2198
+ LII SV DA Y RA N+GG S A L + K ++P +
Sbjct: 61 YHQLIIASVTDDDATVYQVRATNQGGSVSGTASLEVEVPAKIHLPKTLEGMGAVHALRGE 120
Query: 2199 VVVVVC 2204
VV +
Sbjct: 121 VVSIKI 126
Score = 106 bits (266), Expect = 7e-26
Identities = 28/123 (22%), Positives = 53/123 (43%), Gaps = 4/123 (3%)
Query: 449 EFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCP 508
++V A N+ G S + S++++ P P+ + + +A++ + +G P
Sbjct: 76 VYQVRATNQGGSV---SGTASLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKP 132
Query: 509 KPTISWLKGSREITPSARHHIFAEGDTYT-LIINSVYGVDADEYVCRAVNKGGVKSTKAE 567
P I+W KG I + + + + + N V DA YV A N+ G+ E
Sbjct: 133 DPVITWQKGQDLIDNNGHYQVIVTRSFTSLVFPNGVERKDAGFYVVCAKNRFGIDQKTVE 192
Query: 568 LII 570
L +
Sbjct: 193 LDV 195
Score = 106 bits (266), Expect = 7e-26
Identities = 28/123 (22%), Positives = 53/123 (43%), Gaps = 4/123 (3%)
Query: 2056 EFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCP 2115
++V A N+ G S + S++++ P P+ + + +A++ + +G P
Sbjct: 76 VYQVRATNQGGSV---SGTASLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKP 132
Query: 2116 KPTISWLKGSREITPSARHHIFAEGDTYT-LIINSVYGVDADEYVCRAVNKGGVKSTKAE 2174
P I+W KG I + + + + + N V DA YV A N+ G+ E
Sbjct: 133 DPVITWQKGQDLIDNNGHYQVIVTRSFTSLVFPNGVERKDAGFYVVCAKNRFGIDQKTVE 192
Query: 2175 LII 2177
L +
Sbjct: 193 LDV 195
Score = 97.9 bits (244), Expect = 6e-23
Identities = 23/123 (18%), Positives = 45/123 (36%), Gaps = 4/123 (3%)
Query: 59 EFRIIAVNAIGKSEPSICTTPVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTP 118
+++ A N G T +++ P + + + G++++++ +G P
Sbjct: 76 VYQVRATNQGGSVS---GTASLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKP 132
Query: 119 VPKCRWLRNGREISSGARYRVETAGGVFRLHF-NEVTDVDNGDYTCEAYNSVGFAHTSSR 177
P W + I + Y+V L F N V D G Y A N G +
Sbjct: 133 DPVITWQKGQDLIDNNGHYQVIVTRSFTSLVFPNGVERKDAGFYVVCAKNRFGIDQKTVE 192
Query: 178 VKI 180
+ +
Sbjct: 193 LDV 195
Score = 97.9 bits (244), Expect = 6e-23
Identities = 23/123 (18%), Positives = 45/123 (36%), Gaps = 4/123 (3%)
Query: 1666 EFRIIAVNAIGKSEPSICTTPVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTP 1725
+++ A N G T +++ P + + + G++++++ +G P
Sbjct: 76 VYQVRATNQGGSVS---GTASLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKP 132
Query: 1726 VPKCRWLRNGREISSGARYRVETAGGVFRLHF-NEVTDVDNGDYTCEAYNSVGFAHTSSR 1784
P W + I + Y+V L F N V D G Y A N G +
Sbjct: 133 DPVITWQKGQDLIDNNGHYQVIVTRSFTSLVFPNGVERKDAGFYVVCAKNRFGIDQKTVE 192
Query: 1785 VKI 1787
+ +
Sbjct: 193 LDV 195
Score = 86.3 bits (214), Expect = 6e-19
Identities = 30/126 (23%), Positives = 52/126 (41%), Gaps = 5/126 (3%)
Query: 1105 EFRVCAVNAAGQGPWSSSSDI-IMCCAPPCAPKITSDLSIRDMTVLAGEEFTITVPFSGR 1163
++V A N G S ++ + + A PK + + L GE +I +PFSG+
Sbjct: 76 VYQVRATNQGGSV--SGTASLEVEVPAKIHLPKTLEGM--GAVHALRGEVVSIKIPFSGK 131
Query: 1164 PKPTPIWTVNGDEVSPDGRIKFETSENQTIYRNKSAKRATDSGSYTIQLVNTVGSDSASC 1223
P P W D + +G + + + T + D+G Y + N G D +
Sbjct: 132 PDPVITWQKGQDLIDNNGHYQVIVTRSFTSLVFPNGVERKDAGFYVVCAKNRFGIDQKTV 191
Query: 1224 KVYVVD 1229
++ V D
Sbjct: 192 ELDVAD 197
Score = 69.0 bits (169), Expect = 5e-13
Identities = 27/107 (25%), Positives = 44/107 (41%), Gaps = 7/107 (6%)
Query: 573 APKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFH--VETSER 630
AP F R N + TG+PKP + WYR + I + G + E
Sbjct: 4 APHFKEELR---NLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGG 60
Query: 631 HAILTIRDASNVDTAPYRVVAENDLGMDS--AIVKIQISDRPDPPQF 675
+ L I ++ D Y+V A N G S A +++++ + P+
Sbjct: 61 YHQLIIASVTDDDATVYQVRATNQGGSVSGTASLEVEVPAKIHLPKT 107
Score = 62.8 bits (153), Expect = 7e-11
Identities = 25/114 (21%), Positives = 44/114 (38%), Gaps = 8/114 (7%)
Query: 1134 APKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDG-RIKFETSENQT 1192
AP +L R++ V T+ +G PKP W G E+ DG + + + +
Sbjct: 4 APHFKEEL--RNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGGY 61
Query: 1193 IYRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYV-----VDKPSPPQGPLDVS 1241
++ D+ Y ++ N GS S + + V + P +G V
Sbjct: 62 HQLIIASVTDDDATVYQVRATNQGGSVSGTASLEVEVPAKIHLPKTLEGMGAVH 115
Score = 59.0 bits (143), Expect = 1e-09
Identities = 25/96 (26%), Positives = 38/96 (39%), Gaps = 1/96 (1%)
Query: 1413 VIVEEQPNKPVMDLSGVRDITVKAGEDFSIHVPFMAFPQPAAFWFANDSIIDDSDTRVHK 1472
V V + + P L G+ + GE SI +PF P P W +ID++
Sbjct: 96 VEVPAKIHLPK-TLEGMGAVHALRGEVVSIKIPFSGKPDPVITWQKGQDLIDNNGHYQVI 154
Query: 1473 QLTMNSASLVVKNSQRSDGGQYRLQLKNPAGFDTAT 1508
++ + +R D G Y + KN G D T
Sbjct: 155 VTRSFTSLVFPNGVERKDAGFYVVCAKNRFGIDQKT 190
Score = 50.5 bits (121), Expect = 1e-06
Identities = 20/100 (20%), Positives = 37/100 (37%), Gaps = 4/100 (4%)
Query: 181 GTPPRIDRMPNALYIPEGDNTKVKIFYAGD-QPMEVSLTKNGR-VVQSDDRFKFTVLDD- 237
P L + N + G +P V + G+ ++ +++
Sbjct: 2 AMAPHFKEELRNLNVRYQSNATLVCKVTGHPKP-IVKWYRQGKEIIADGLKYRIQEFKGG 60
Query: 238 YIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLP 277
Y + I + +DA Y V +N GSVSGT ++ +
Sbjct: 61 YHQLIIASVTDDDATVYQVRATNQGGSVSGTASLEVEVPA 100
Score = 50.5 bits (121), Expect = 1e-06
Identities = 20/100 (20%), Positives = 37/100 (37%), Gaps = 4/100 (4%)
Query: 1788 GTPPRIDRMPNALYIPEGDNTKVKIFYAGD-QPMEVSLTKNGR-VVQSDDRFKFTVLDD- 1844
P L + N + G +P V + G+ ++ +++
Sbjct: 2 AMAPHFKEELRNLNVRYQSNATLVCKVTGHPKP-IVKWYRQGKEIIADGLKYRIQEFKGG 60
Query: 1845 YIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLP 1884
Y + I + +DA Y V +N GSVSGT ++ +
Sbjct: 61 YHQLIIASVTDDDATVYQVRATNQGGSVSGTASLEVEVPA 100
Score = 43.2 bits (102), Expect = 3e-04
Identities = 14/80 (17%), Positives = 31/80 (38%), Gaps = 1/80 (1%)
Query: 1430 RDITVKAGEDFSIHVPFMAFPQPAAFWFAND-SIIDDSDTRVHKQLTMNSASLVVKNSQR 1488
R++ V+ + ++ P+P W+ II D ++ L++ +
Sbjct: 12 RNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTD 71
Query: 1489 SDGGQYRLQLKNPAGFDTAT 1508
D Y+++ N G + T
Sbjct: 72 DDATVYQVRATNQGGSVSGT 91
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain,
vegfr-2, growth factor receptor, VEGF LI
hormone-signaling protein complex, angiogenesis; 3.20A
{Homo sapiens} PDB: 3v6b_R
Length = 772
Score = 207 bits (527), Expect = 3e-55
Identities = 102/703 (14%), Positives = 191/703 (27%), Gaps = 109/703 (15%)
Query: 59 EFRIIAVNAIGKSEPSICTTPVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTP 118
++ S V+ + + K + + C + +
Sbjct: 100 AYKCFYRETDLASV---IYVYVQDYRSPFIASVSDQHGVVYITENKNKTVVIPCLGSISN 156
Query: 119 VP--KCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSS 176
+ C R + G R ++ G G CEA + +
Sbjct: 157 LNVSLCARYPEKRFVPDGNRISWDSKKG---FTIPSYMISYAGMVFCEAKINDESYQSIM 213
Query: 177 RVKIGTPPRIDRM----PNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDD---- 228
+ + RI + + + + G+ + + + + +
Sbjct: 214 YIVVVVGYRIYDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLV 273
Query: 229 ------RFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPIG 282
+ + + I + + D G YT S+ + + + + P G
Sbjct: 274 NRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRVHEKPFVAFG 333
Query: 283 P--LDVSEITKH-----TCTLHWNPP-----KYDGGLKVTHYVVERRDISMPHWICI-ST 329
+ E T PP +G + I H + I
Sbjct: 334 SGMESLVEATVGERVRIPAKYLGYPPPEIKWYKNGIP-----LESNHTIKAGHVLTIMEV 388
Query: 330 TCHDT---TFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYD---------- 376
+ DT T I+ +E HV+++ PP I SP D
Sbjct: 389 SERDTGNYTVILT-NPISKEKQSHVVSLVVYV--PPQ--IGEKSLISPVDSYQYGTTQTL 443
Query: 377 ------KPSPPGI-------PVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDA 423
P P I V+++ P ++ S +K EV +
Sbjct: 444 TCTVYAIPPPHHIHWYWQLEEECANEPSQAVSVTNPYPCEEWRSVEDFQGGNKIEVNKNQ 503
Query: 424 WQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEI 483
+ + S + I Y + A N+ G S + PEI
Sbjct: 504 FALIEGKNKTVSTLVIQAANVSALY--KCEAVNKVG---RGERVISFHVTRG-----PEI 553
Query: 484 IVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITP-------------------- 523
+ + + + CT ++W K + P
Sbjct: 554 TLQ-PDMQPTEQESVSLWCTADRSTFENLTWYKLGPQPLPIHVGELPTPVCKNLDTLWKL 612
Query: 524 SARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPRFR 583
+A + D + + + D +YVC A ++ K + + V P
Sbjct: 613 NATMFSNSTNDILIMELKNASLQDQGDYVCLAQDRKTKKRHCVVRQLTVLER--VAPTIT 670
Query: 584 DT---AYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSERHAILTIRDAS 640
GE++ V +G P P+I W++DNE + ++ R+ LTIR
Sbjct: 671 GNLENQTTSIGESIEVSCTASGNPPPQIMWFKDNETLVEDSGIVLKDGNRN--LTIRRVR 728
Query: 641 NVDTAPYRVVAENDLGMDSAIVKIQISDRPDPPQFPTVEDIGH 683
D Y A + LG I + H
Sbjct: 729 KEDEGLYTCQACSVLGCAKVEAFFIIEGAQEKTNLERTHHHHH 771
Score = 190 bits (484), Expect = 8e-50
Identities = 116/851 (13%), Positives = 215/851 (25%), Gaps = 159/851 (18%)
Query: 1110 AVNAAGQGPWSSSSDIIMCCAPPCAPKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPI 1169
AA G S S D P+++ +T+ A IT R +
Sbjct: 16 ETRAASVGLPSVSLD---------LPRLSIQKD--ILTIKANTTLQITC----RGQRDLD 60
Query: 1170 WTVNGDEVSPDGRIKFETSENQTIYRN---KSAKRATDSGSYTIQLVNTVGSDSASCKVY 1226
W ++ + R++ + + D+G+Y T + V
Sbjct: 61 WLWPNNQSGSEQRVEVTECSDGLFCKTLTIPKV-IGNDTGAYKCFYRETDLASVIYVYVQ 119
Query: 1227 VVDKPSPPQGPLDVSDITPE---------SCSLSWKPPLDDGGSPITNYVVEKYESATGF 1277
P + C S + + +
Sbjct: 120 DYRSPFIASVSDQHGVVYITENKNKTVVIPCLGSISNLNVSLCARYPEKRFVPDGNRISW 179
Query: 1278 WSKLSSFVRSPAYDVFGLETNRQYRFRVRAENQYGVSE-PLELDNSITAKFPFTVPDPP- 1335
SK + S G A+ + + + + + V P
Sbjct: 180 DSKKGFTIPSYMISYAG-------MVFCEAKINDESYQSIMYIVVVVGYRIYDVVLSPSH 232
Query: 1336 -----------------GQPQ-IVDWDTNNATLMWDRPRTDGGSKIQGYKMLLKTPTGEL 1377
+ +D++ + + +K L
Sbjct: 233 GIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTL 292
Query: 1378 PTTIWSKIRPTSSTVY-CKDTTMNSSNSEPGKQSGPVIVEEQPNKPVMDLSGVRDITVKA 1436
TI + + +Y C + ++ K S V V E+P +
Sbjct: 293 --TI-DGVTRSDQGLYTC--AASSGLMTK--KNSTFVRVHEKPFVAFGSGME-SLVEATV 344
Query: 1437 GEDFSIHVPFMAFPQPAAFWFANDSIIDDSDTRVHKQLTMNSASLVVKNSQRSDGGQYRL 1496
GE I ++ +P P W+ N ++ + T L + D G Y +
Sbjct: 345 GERVRIPAKYLGYPPPEIKWYKNGIPLESNHT------IKAGHVLTIMEVSERDTGNYTV 398
Query: 1497 QLKNPAGFDTATLHSRLRTLPDSVNPRCHLPSSTSKERPKFPTHPNHQPWLKWA---RAS 1553
L NP + + L P+ P + +
Sbjct: 399 ILTNPISKEKQSHVVSL----------------VVYVPPQIGEKSLISPVDSYQYGTTQT 442
Query: 1554 LTSKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVL 1613
LT V + + W E+ ++ + P + V
Sbjct: 443 LTCT-VYAIPPPHHIHWYWQL------------EEECANEPSQAVSVTNPYPCEEWRSVE 489
Query: 1614 WVSEGKSIGSERGSTAQFLEREVGGAIWLKCNDYNVLECSFSVLNLVEGNDY-EFRIIAV 1672
G I + A + + S L + N ++ AV
Sbjct: 490 DFQGGNKIEVNKNQFALIEGKNK----------------TVSTLVIQAANVSALYKCEAV 533
Query: 1673 NAIGKSEPSICTTPVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWL 1732
N +G+ E + + I D+ + ++L C A + W
Sbjct: 534 NKVGRGE---RVISFHV------TRGPEITLQPDMQPTEQESVSLWCTADRSTFENLTWY 584
Query: 1733 RNGREISSGARYRVETA--------------------GGVFRLHFNEVTDVDNGDYTCEA 1772
+ G + + T + + + D GDY C A
Sbjct: 585 KLGPQPLPIHVGELPTPVCKNLDTLWKLNATMFSNSTNDILIMELKNASLQDQGDYVCLA 644
Query: 1773 YNSVGFAHTSSR----VKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNG 1828
+ V P I G++ +V +G+ P ++ K+
Sbjct: 645 QDRKTKKRHCVVRQLTVLERVAPTITGNLENQTTSIGESIEVSCTASGNPPPQIMWFKDN 704
Query: 1829 RVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPI 1888
+ D + D + I+ +RKED G YT + G I G
Sbjct: 705 ETLVEDSGI--VLKDGNRNLTIRRVRKEDEGLYTCQACSVLGCAKVEAFFIIEGAQEKT- 761
Query: 1889 GPLDVSEITKH 1899
E T H
Sbjct: 762 ----NLERTHH 768
Score = 184 bits (469), Expect = 6e-48
Identities = 95/594 (15%), Positives = 181/594 (30%), Gaps = 94/594 (15%)
Query: 1666 EFRIIAVNAIGKSEPSICTTPVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTP 1725
A + SI V + + P + + +G+ L L C A
Sbjct: 197 MVFCEAKINDESYQ-SIMYIVVVV---GYRIYDVVLSPSHGIELSVGEKLVLNCTARTEL 252
Query: 1726 VPKCRW--------LRNGREISSGARYRVETAGGVF--RLHFNEVTDVDNGDYTCEAYNS 1775
+ ++ + ++ + + + F L + VT D G YTC A +
Sbjct: 253 NVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSG 312
Query: 1776 VGFAHTSSRVKIGTPPRI---DRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQ 1832
+ S+ V++ P + M + + G+ ++ Y G P E+ KNG ++
Sbjct: 313 LMTKKNSTFVRVHEKPFVAFGSGMESLVEATVGERVRIPAKYLGYPPPEIKWYKNGIPLE 372
Query: 1833 SDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPIGPLD 1892
S+ + +++ I E+ + D G+YTV L+N + +++ P IG
Sbjct: 373 SNHT----IKAGHVLT-IMEVSERDTGNYTVILTNPISKEKQSHVVSLVVYVPPQIGEKS 427
Query: 1893 VSEITKH---------TCTLHWNPP------KYDGGLKVTHYVVERRDISMPHWICISTT 1937
+ TCT++ PP + + + + ++ P+ +
Sbjct: 428 LISPVDSYQYGTTQTLTCTVYAIPPPHHIHWYWQLEEECANEPSQAVSVTNPYPCEEWRS 487
Query: 1938 CHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAK------------------ 1979
D + ++ G + + A
Sbjct: 488 VEDFQGGNKIEVNKNQFALI------EGKNKTVSTLVIQAANVSALYKCEAVNKVGRGER 541
Query: 1980 ----SPYDKPSPPGIPVVTQVGGDFVNLS------------WDKPLDDGGSRIQGYWIDK 2023
P P + + V+L W K G
Sbjct: 542 VISFHVTRGPEITLQPDMQPTEQESVSLWCTADRSTFENLTWYKLGPQPLPIHVGELPTP 601
Query: 2024 HEVGSDAWQRVNVAICAPSQINIPNLI--------EGRQYEFRVYAQNEAGLSLPSSASN 2075
D ++N + + S +I + +G Y AQ+
Sbjct: 602 VCKNLDTLWKLNATMFSNSTNDILIMELKNASLQDQG-DYVCL--AQDRKT-KKRHCVVR 657
Query: 2076 SVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHH 2135
+ + + AP I L N + + CT +G P P I W K + + +
Sbjct: 658 QLTVLER---VAPTITGNLENQTTSIGESIEVSCTASGNPPPQIMWFKDNETLVEDSGIV 714
Query: 2136 IFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPRF 2189
+ + L I V D Y C+A + G +A II A + R
Sbjct: 715 L--KDGNRNLTIRRVRKEDEGLYTCQACSVLGCAKVEAFFIIEGAQEKTNLERT 766
Score = 177 bits (450), Expect = 1e-45
Identities = 85/680 (12%), Positives = 169/680 (24%), Gaps = 103/680 (15%)
Query: 157 DNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVS 216
+ C + S + PR+ + L I Q ++
Sbjct: 8 AVALWLCVETRAASVGLPSVSL---DLPRLSIQKDILTIKANTTL---QITCRGQR-DLD 60
Query: 217 LTKNGRVVQSDDRFKFTVLDD---YIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINI 273
S+ R + T D + I ++ D G Y + + +
Sbjct: 61 WLWPNNQSGSEQRVEVTECSDGLFCKTLTIPKVIGNDTGAYKCFYRETDLASVIYVYVQD 120
Query: 274 TGLP-----GPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICIS 328
P G + ++E T + L V+ +P IS
Sbjct: 121 YRSPFIASVSDQHGVVYITENKNKTVVIPCLGS--ISNLNVSLCARYPEKRFVPDGNRIS 178
Query: 329 TTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQ 388
F + + A + + I + YD P +
Sbjct: 179 WD-SKKGFTIPSYMISYAGMVFCEAKINDESYQSIMYIVVVVGYRIYDVVLSPSHGIELS 237
Query: 389 VGGDF-------------VNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPS 435
VG ++ +W+ P + K + GS+ + + S
Sbjct: 238 VGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFL-------S 290
Query: 436 QINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQN 495
+ I + Q + A + + NS ++ A
Sbjct: 291 TLTIDGVTRSDQGLYTCAASSGLM-----TKKNSTFVRVHEKPFVAFGSGMESLVEATVG 345
Query: 496 HNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRA 555
+ G P P I W K + + + L I V D Y
Sbjct: 346 ERVRIPAKYLGYPPPEIKWYKNGIPLESNHTIK-----AGHVLTIMEVSERDTGNYTVIL 400
Query: 556 VNKGG--VKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKP-KITWYR 612
N +S L++ P+ + G + P P I WY
Sbjct: 401 TNPISKEKQSHVVSLVVYVPPQIGEKSLISPVDSYQYGTTQTLTCTVYAIPPPHHIHWYW 460
Query: 613 D---------------------------------NEVIESGGHFHVETSERHAILTIRDA 639
N++ + F + + + T+
Sbjct: 461 QLEEECANEPSQAVSVTNPYPCEEWRSVEDFQGGNKIEVNKNQFALIEGKNKTVSTLVIQ 520
Query: 640 SNVDTAPYRVVAENDLGMDSAIVKIQISDRPDPPQFPTVEDIGHDSLALVWRAP------ 693
+ +A Y+ A N +G ++ ++ P+ P ++ +S++L A
Sbjct: 521 AANVSALYKCEAVNKVGRGERVISFHVTRGPEITLQPDMQPTEQESVSLWCTADRSTFEN 580
Query: 694 ---IWDGGSNITNYIVEKREHPMSSW----------IRVGNTRFTTMAITGLSPGHQYEF 740
G + ++ E + M + S Q ++
Sbjct: 581 LTWYKLGPQPLPIHVGELPTPVCKNLDTLWKLNATMFSNSTNDILIMELKNASLQDQGDY 640
Query: 741 RVYAENVYGRSDPSTTSDLI 760
A++ + L
Sbjct: 641 VCLAQDRKTKKRHCVVRQLT 660
Score = 142 bits (360), Expect = 2e-34
Identities = 81/619 (13%), Positives = 161/619 (26%), Gaps = 108/619 (17%)
Query: 1666 EFRIIAVNAIGKSEPSICTTPVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTP 1725
++ S V+ + + K + + C + +
Sbjct: 100 AYKCFYRETDLASV---IYVYVQDYRSPFIASVSDQHGVVYITENKNKTVVIPCLGSISN 156
Query: 1726 VP--KCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSS 1783
+ C R + G R ++ G G CEA + +
Sbjct: 157 LNVSLCARYPEKRFVPDGNRISWDSKKG---FTIPSYMISYAGMVFCEAKINDESYQSIM 213
Query: 1784 RVKIGTPPRIDRM----PNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDD---- 1835
+ + RI + + + + G+ + + + + +
Sbjct: 214 YIVVVVGYRIYDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLV 273
Query: 1836 ------RFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPIG 1889
+ + + I + + D G YT S+ + + + + P G
Sbjct: 274 NRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRVHEKPFVAFG 333
Query: 1890 P--LDVSEITKH-----TCTLHWNPP-----KYDGGLKVTHYVVERRDISMPHWICI-ST 1936
+ E T PP +G + I H + I
Sbjct: 334 SGMESLVEATVGERVRIPAKYLGYPPPEIKWYKNGIP-----LESNHTIKAGHVLTIMEV 388
Query: 1937 TCHDT---TFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYD---------- 1983
+ DT T I+ +E HV+++ PP I SP D
Sbjct: 389 SERDTGNYTVILT-NPISKEKQSHVVSLVVYV--PPQ--IGEKSLISPVDSYQYGTTQTL 443
Query: 1984 ------KPSPPGI-------PVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDA 2030
P P I V+++ P ++ S +K EV +
Sbjct: 444 TCTVYAIPPPHHIHWYWQLEEECANEPSQAVSVTNPYPCEEWRSVEDFQGGNKIEVNKNQ 503
Query: 2031 WQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEI 2090
+ + S + I Y + A N+ G S + PEI
Sbjct: 504 FALIEGKNKTVSTLVIQAANVSALY--KCEAVNKVG---RGERVISFHVTRG-----PEI 553
Query: 2091 IVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITP-------------------- 2130
+ + + + CT ++W K + P
Sbjct: 554 TLQ-PDMQPTEQESVSLWCTADRSTFENLTWYKLGPQPLPIHVGELPTPVCKNLDTLWKL 612
Query: 2131 SARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPRF- 2189
+A + D + + + D +YVC A ++ K + + V P
Sbjct: 613 NATMFSNSTNDILIMELKNASLQDQGDYVCLAQDRKTKKRHCVVRQLTVLER--VAPTIT 670
Query: 2190 ---RDTAYFESDVVVVVCV 2205
+ + + V C
Sbjct: 671 GNLENQTTSIGESIEVSCT 689
Score = 134 bits (337), Expect = 1e-31
Identities = 61/466 (13%), Positives = 114/466 (24%), Gaps = 51/466 (10%)
Query: 1764 DNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVS 1823
+ C + S + PR+ + L I Q ++
Sbjct: 8 AVALWLCVETRAASVGLPSVSL---DLPRLSIQKDILTIKANTTL---QITCRGQR-DLD 60
Query: 1824 LTKNGRVVQSDDRFKFTVLDD---YIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINI 1880
S+ R + T D + I ++ D G Y + + +
Sbjct: 61 WLWPNNQSGSEQRVEVTECSDGLFCKTLTIPKVIGNDTGAYKCFYRETDLASVIYVYVQD 120
Query: 1881 TGLP-----GPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICIS 1935
P G + ++E T + L V+ +P IS
Sbjct: 121 YRSPFIASVSDQHGVVYITENKNKTVVIPCLGS--ISNLNVSLCARYPEKRFVPDGNRIS 178
Query: 1936 TTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQ 1995
F + + A + + I + YD P +
Sbjct: 179 WD-SKKGFTIPSYMISYAGMVFCEAKINDESYQSIMYIVVVVGYRIYDVVLSPSHGIELS 237
Query: 1996 VGGDF-------------VNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPS 2042
VG ++ +W+ P + K + GS+ + + S
Sbjct: 238 VGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFL-------S 290
Query: 2043 QINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQN 2102
+ I + Q + A + + NS ++ A
Sbjct: 291 TLTIDGVTRSDQGLYTCAASSGLM-----TKKNSTFVRVHEKPFVAFGSGMESLVEATVG 345
Query: 2103 HNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRA 2162
+ G P P I W K + + + L I V D Y
Sbjct: 346 ERVRIPAKYLGYPPPEIKWYKNGIPLESNHTIK-----AGHVLTIMEVSERDTGNYTVIL 400
Query: 2163 VNKGG--VKSTKAELIIMTAPKFNVPPRFRD-TAYFESDVVVVVCV 2205
N +S L++ P+ +Y + C
Sbjct: 401 TNPISKEKQSHVVSLVVYVPPQIGEKSLISPVDSYQYGTTQTLTCT 446
Score = 127 bits (319), Expect = 1e-29
Identities = 65/570 (11%), Positives = 142/570 (24%), Gaps = 82/570 (14%)
Query: 243 IKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPIGPLDVSEITKH-------TCT 295
++ + + ++ + +++ P + +T TC
Sbjct: 1 MQSKVLLAVALWLCVETRAASVGLPSVSLD------LPRLSIQKDILTIKANTTLQITCR 54
Query: 296 LHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVN 355
+ + S T + + +
Sbjct: 55 GQRDL-------DWLWPNNQSGSEQRVEVTECSDGLFCKTLTIPKVIGNDTGAYKCFYRE 107
Query: 356 ENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWID 415
+ + ++ G+ +T+ V + P S +
Sbjct: 108 TDLASVIYVYVQDYRSPFIASVSDQHGVVYITENKNKTVVI----PCLGSISNLNVSLCA 163
Query: 416 KHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDP 475
++ ++ + IP+ + A+ S S V +
Sbjct: 164 RYPEKRFVPDGNRISWDSKKGFTIPSYMISYAGMVFCEAKINDE-SYQSIMYIVVVVGYR 222
Query: 476 MAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISW------LKGSREITPSARHHI 529
+ ++ P CT I + K + +
Sbjct: 223 IY---DVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKT 279
Query: 530 FAEGDTY----TLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPRFRDT 585
+ + TL I+ V D Y C A + K + + P
Sbjct: 280 QSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRVHEKPFVAFGSGMESL 339
Query: 586 AYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSERHAILTIRDASNVDTA 645
GE V + + GYP P+I WY++ +ES LTI + S DT
Sbjct: 340 VEATVGERVRIPAKYLGYPPPEIKWYKNGIPLESNHTIKAGHV-----LTIMEVSERDTG 394
Query: 646 PYRVVAENDLGMD--SAIVKIQISDRPDPPQFPTVEDI---------------------- 681
Y V+ N + + S +V + + P + + +
Sbjct: 395 NYTVILTNPISKEKQSHVVSLVVYVPPQIGEKSLISPVDSYQYGTTQTLTCTVYAIPPPH 454
Query: 682 ---------------GHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSWIRVGNTRFTT 726
++++ P + S K E + + + T
Sbjct: 455 HIHWYWQLEEECANEPSQAVSVTNPYPCEEWRSVEDFQGGNKIEVNKNQFALIEGKNKTV 514
Query: 727 MAITGLSPGHQYEFRVYAENVYGRSDPSTT 756
+ + ++ A N GR + +
Sbjct: 515 STLVIQAANVSALYKCEAVNKVGRGERVIS 544
Score = 125 bits (315), Expect = 5e-29
Identities = 46/272 (16%), Positives = 80/272 (29%), Gaps = 41/272 (15%)
Query: 46 SFSVLNLVEGNDY-EFRIIAVNAIGKSEPSICTTPVKICEFVGGEKPDFIVPLKDLVVPL 104
+ S L + N ++ AVN +G+ E + + I D+
Sbjct: 513 TVSTLVIQAANVSALYKCEAVNKVGRGE---RVISFHV------TRGPEITLQPDMQPTE 563
Query: 105 GKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETA--------------------GG 144
+ ++L C A + W + G + + T
Sbjct: 564 QESVSLWCTADRSTFENLTWYKLGPQPLPIHVGELPTPVCKNLDTLWKLNATMFSNSTND 623
Query: 145 VFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSR----VKIGTPPRIDRMPNALYIPEGDN 200
+ + + D GDY C A + V P I G++
Sbjct: 624 ILIMELKNASLQDQGDYVCLAQDRKTKKRHCVVRQLTVLERVAPTITGNLENQTTSIGES 683
Query: 201 TKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSN 260
+V +G+ P ++ K+ + D + D + I+ +RKED G YT +
Sbjct: 684 IEVSCTASGNPPPQIMWFKDNETLVEDSGI--VLKDGNRNLTIRRVRKEDEGLYTCQACS 741
Query: 261 SSGSVSGTFTINITGLPGPPIGPLDVSEITKH 292
G I G E T H
Sbjct: 742 VLGCAKVEAFFIIEGAQEKT-----NLERTHH 768
Score = 101 bits (253), Expect = 1e-21
Identities = 47/284 (16%), Positives = 69/284 (24%), Gaps = 42/284 (14%)
Query: 63 IAVNAIGKSEPSICTTPVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKC 122
+ A PS+ P + L + L + C
Sbjct: 15 VETRAASVGLPSVSLDL-----------PRLSIQKDILTIKANTTLQITCRGQRDL---- 59
Query: 123 RWLRNGREISSGARYRVETAGG---VFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVK 179
WL + S R V L +V D G Y C + + V+
Sbjct: 60 DWLWPNNQSGSEQRVEVTECSDGLFCKTLTIPKVIGNDTGAYKCFYRETDLASVIYVYVQ 119
Query: 180 IGTPPRIDRMP---NALYIPEGDNTKVKI-FYAGDQPMEVSLT---KNGRVVQSDDRFKF 232
P I + +YI E N V I + VSL R V +R +
Sbjct: 120 DYRSPFIASVSDQHGVVYITENKNKTVVIPCLGSISNLNVSLCARYPEKRFVPDGNRISW 179
Query: 233 TVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPP---IGPLDVSEI 289
D I AG + S I + + P E+
Sbjct: 180 ---DSKKGFTIPSYMISYAGMVFCEAKINDESYQSIMYIVVVVGYRIYDVVLSPSHGIEL 236
Query: 290 TKH-----TCTLHWNPP------KYDGGLKVTHYVVERRDISMP 322
+ CT K H + RD+
Sbjct: 237 SVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQ 280
Score = 101 bits (253), Expect = 1e-21
Identities = 47/284 (16%), Positives = 69/284 (24%), Gaps = 42/284 (14%)
Query: 1670 IAVNAIGKSEPSICTTPVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKC 1729
+ A PS+ P + L + L + C
Sbjct: 15 VETRAASVGLPSVSLDL-----------PRLSIQKDILTIKANTTLQITCRGQRDL---- 59
Query: 1730 RWLRNGREISSGARYRVETAGG---VFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVK 1786
WL + S R V L +V D G Y C + + V+
Sbjct: 60 DWLWPNNQSGSEQRVEVTECSDGLFCKTLTIPKVIGNDTGAYKCFYRETDLASVIYVYVQ 119
Query: 1787 IGTPPRIDRMP---NALYIPEGDNTKVKI-FYAGDQPMEVSLT---KNGRVVQSDDRFKF 1839
P I + +YI E N V I + VSL R V +R +
Sbjct: 120 DYRSPFIASVSDQHGVVYITENKNKTVVIPCLGSISNLNVSLCARYPEKRFVPDGNRISW 179
Query: 1840 TVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPP---IGPLDVSEI 1896
D I AG + S I + + P E+
Sbjct: 180 ---DSKKGFTIPSYMISYAGMVFCEAKINDESYQSIMYIVVVVGYRIYDVVLSPSHGIEL 236
Query: 1897 TKH-----TCTLHWNPP------KYDGGLKVTHYVVERRDISMP 1929
+ CT K H + RD+
Sbjct: 237 SVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQ 280
Score = 95.6 bits (237), Expect = 9e-20
Identities = 72/551 (13%), Positives = 136/551 (24%), Gaps = 111/551 (20%)
Query: 1066 WVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLI-----ENHEYEFRVCAVNAAGQGPWS 1120
W ++ + +++L + + + A +
Sbjct: 260 WEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGLMT---K 316
Query: 1121 SSSDIIMCCAPPCAPKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPD 1180
+S + P + S + GE I + G P P W NG + +
Sbjct: 317 KNSTFVRVHEKPFVAFGSGMES--LVEATVGERVRIPAKYLGYPPPEIKWYKNGIPLESN 374
Query: 1181 GRIKFETSENQTIYRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYVVDKPSPPQGPLDV 1240
IK TI D+G+YT+ L N + + S V +V P G +
Sbjct: 375 HTIKAGHVL--TIMEV----SERDTGNYTVILTNPISKEKQSHVVSLVVYVPPQIGEKSL 428
Query: 1241 SDITPE---------SCSLSWKPP------LDDGGSPITNYVVEKYESATGFWSKLSSFV 1285
+C++ PP N + + + V
Sbjct: 429 ISPVDSYQYGTTQTLTCTVYAIPPPHHIHWYWQLEEECANEPSQAVSVTNPYPCEEWRSV 488
Query: 1286 RSPAYDVFGLETNRQYR----------------------FRVRAENQYGVSEPLELDNSI 1323
Q+ ++ A N+ G
Sbjct: 489 EDFQGGNKIEVNKNQFALIEGKNKTVSTLVIQAANVSALYKCEAVNKVG---------RG 539
Query: 1324 TAKFPFTVPDPP---GQPQIVDWDTNNATL------------MWDRPRTDGGSKIQGYKM 1368
F V P QP + + + +L W + G + +
Sbjct: 540 ERVISFHVTRGPEITLQPDMQPTEQESVSLWCTADRSTFENLTWYK---LGPQPLPIHVG 596
Query: 1369 LLKTPTGELPTTIWSKIRPTSSTVYCKDTTMNSSNSEP----------------GKQSGP 1412
L TP + T+W S M N+ +
Sbjct: 597 ELPTPVCKNLDTLWKLNATMFSNSTNDILIMELKNASLQDQGDYVCLAQDRKTKKRHCVV 656
Query: 1413 VIVEEQPNKPVMDLSGVRDITVKAGEDFSIHVPFMAFPQPAAFWFANDSIIDDSDTRVHK 1472
+ + + T GE + P P WF ++ + +
Sbjct: 657 RQLTVLERVAPTITGNLENQTTSIGESIEVSCTASGNPPPQIMWFKDNETLVEDS---GI 713
Query: 1473 QLTMNSASLVVKNSQRSDGGQYRLQLKNPAGFDTATLHSRLRTLPDSVNPRCHLPSSTSK 1532
L + +L ++ ++ D G Y Q + G + + N
Sbjct: 714 VLKDGNRNLTIRRVRKEDEGLYTCQACSVLGCAKVEAFFIIEGAQEKTNL---------- 763
Query: 1533 ERPKFPTHPNH 1543
+ H +H
Sbjct: 764 --ERTHHHHHH 772
Score = 77.9 bits (191), Expect = 2e-14
Identities = 55/509 (10%), Positives = 109/509 (21%), Gaps = 105/509 (20%)
Query: 1094 RVTSLIENHEYEFRVCAVNAAGQGPWSSSSDIIMCCAPPCAPKITSDLSIRDMTVLAGEE 1153
+ S + ++ A S I+ + S + + GE+
Sbjct: 186 TIPSYMISYAGMVFCEAKINDES---YQSIMYIVVVVGYRIYDVVLSPS-HGIELSVGEK 241
Query: 1154 FTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQTIYRNKSAKRAT---------D 1204
+ + + +T D
Sbjct: 242 LVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSD 301
Query: 1205 SGSYTIQLVNTVGSDSASCKVYVVDKPSPPQGPLDVSDITP---ESCSLSWKPPLDDGGS 1261
G YT + + + S V V +KP G S + E + K G
Sbjct: 302 QGLYTCAASSGLMTKKNSTFVRVHEKPFVAFGSGMESLVEATVGERVRIPAKYL----GY 357
Query: 1262 PITNYVVEKYESATGFWSKLSSFVRSPAYDVFG--LETNR-------QYRFRVRAENQYG 1312
P W K + S G L Y N
Sbjct: 358 PPPEIK----------WYKNGIPLESNHTIKAGHVLTIMEVSERDTGNYTV--ILTNPIS 405
Query: 1313 ---VSEPLELDNSITAKF-PFTVPDPPG------------------QPQIVDWDTNNATL 1350
S + L + + ++ P P + W
Sbjct: 406 KEKQSHVVSLVVYVPPQIGEKSLISPVDSYQYGTTQTLTCTVYAIPPPHHIHWYWQLEEE 465
Query: 1351 MWDRPRTDGGSKIQGYKMLLKTPTGELPTTIWSKIRPTSSTVYCKDTTMNSSNSEPGKQS 1410
+ P ++ + + + K+ T+++ + S
Sbjct: 466 CANEPSQAVSVTNPYPCEEWRSVEDFQGGNKIEVNKNQFALIEGKNKTVSTLVIQAANVS 525
Query: 1411 G-----------------PVIVEEQPNKPVMDLSGVRDITVKAGEDFSIHVPFMAFPQPA 1453
V P + D+ E S+
Sbjct: 526 ALYKCEAVNKVGRGERVISFHVTRGPEITLQ-----PDMQPTEQESVSLWCTADRSTFEN 580
Query: 1454 AFWFANDS-------------------IIDDSDTRVHKQLTMNSASLVVKNSQRSDGGQY 1494
W+ + + + T + + +KN+ D G Y
Sbjct: 581 LTWYKLGPQPLPIHVGELPTPVCKNLDTLWKLNATMFSNSTNDILIMELKNASLQDQGDY 640
Query: 1495 RLQLKNPAGFDTATLHSRLRTLPDSVNPR 1523
++ + +L T+ + V P
Sbjct: 641 VCLAQDRKTKKRHCVVRQL-TVLERVAPT 668
Score = 72.5 bits (177), Expect = 1e-12
Identities = 33/374 (8%), Positives = 82/374 (21%), Gaps = 39/374 (10%)
Query: 1850 IKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPIGPLDVSEITKH-------TCT 1902
++ + + ++ + +++ P + +T TC
Sbjct: 1 MQSKVLLAVALWLCVETRAASVGLPSVSLD------LPRLSIQKDILTIKANTTLQITCR 54
Query: 1903 LHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVN 1962
+ + S T + + +
Sbjct: 55 GQRDL-------DWLWPNNQSGSEQRVEVTECSDGLFCKTLTIPKVIGNDTGAYKCFYRE 107
Query: 1963 ENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWID 2022
+ + ++ G+ +T+ V + P S +
Sbjct: 108 TDLASVIYVYVQDYRSPFIASVSDQHGVVYITENKNKTVVI----PCLGSISNLNVSLCA 163
Query: 2023 KHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDP 2082
++ ++ + IP+ + A+ S S V +
Sbjct: 164 RYPEKRFVPDGNRISWDSKKGFTIPSYMISYAGMVFCEAKINDE-SYQSIMYIVVVVGYR 222
Query: 2083 MAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISW------LKGSREITPSARHHI 2136
+ ++ P CT I + K + +
Sbjct: 223 I---YDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKT 279
Query: 2137 FAEGDTY----TLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPRFRDT 2192
+ + TL I+ V D Y C A + K + + P
Sbjct: 280 QSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRVHEKPFVAFGSGMESL 339
Query: 2193 AY-FESDVVVVVCV 2205
+ V +
Sbjct: 340 VEATVGERVRIPAK 353
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker,
immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Length = 642
Score = 189 bits (480), Expect = 5e-50
Identities = 99/639 (15%), Positives = 168/639 (26%), Gaps = 112/639 (17%)
Query: 59 EFRIIAVNAIGKSEPSICTTPVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTP 118
+ + + + +E + V I V + CE
Sbjct: 85 FYTLHVIKSDLVNEEATGQFRVYPEL-----PKPSISSNNSKPVEDKDAVAFTCEPETQD 139
Query: 119 VPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSS-- 176
W N + + R ++ L VT D Y CE N V + S
Sbjct: 140 -ATYLWWVNNQSLPVSPRLQLSNGNRT--LTLFNVTRNDTASYKCETQNPVSARRSDSVI 196
Query: 177 -RVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVL 235
V G P P G+N + A + P + S NG QS
Sbjct: 197 LNVLYG-PDAPTISPLNTSYRSGENLNLSCHAASNPPAQYSWFVNGTFQQSTQEL----- 250
Query: 236 DDYIIIFIKEIRKEDAGDYTVNLSNSSG--SVSGTFTINITGLPGPPIG------PLDVS 287
FI I ++G YT NS + + TI + P P P++
Sbjct: 251 ------FIPNITVNNSGSYTCQAHNSDTGLNRTTVTTITVYAEPPKPFITSNNSNPVEDE 304
Query: 288 EITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHDTTFIVQGLTEGQEY 347
+ TC Y+ + S+P + + + T + +T
Sbjct: 305 DAVALTCEPEIQNT---------TYLWWVNNQSLPVSPRLQLSNDNRTLTLLSVTRNDVG 355
Query: 348 LFHVMAVNENGMGPPL-EGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNL---------- 396
+ +N + + + P D P G ++L
Sbjct: 356 PYECGI--QNELSVDHSDPVILNVLYGPDDPTISPSYTYYRP--GVNLSLSCHAASNPPA 411
Query: 397 --SW---DKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFR 451
SW + I N+ E +
Sbjct: 412 QYSWLIDGNIQQHTQE-----------------------------LFISNITEKNSGLYT 442
Query: 452 VYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPT 511
A N A + ++ + A I + F C
Sbjct: 443 CQANNSAS-GHSRTTVKTITV---SAELPKPSISSNNSKPVEDKDAVAFTCEPEAQNTTY 498
Query: 512 ISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNK-GGVKSTKAELII 570
+ W+ G + + S R + TL + +V DA YVC N +S L +
Sbjct: 499 LWWVNG-QSLPVSPRLQLSNGN--RTLTLFNVTRNDARAYVCGIQNSVSANRSDPVTLDV 555
Query: 571 MTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSER 630
+ P P + + G N+ + P P+ +W + +
Sbjct: 556 LYGPD--TPIISPPDSSYLSGANLNLSCHSASNPSPQYSWRINGIPQQHTQV-------- 605
Query: 631 HAILTIRDASNVDTAPYRVVAENDLGMD--SAIVKIQIS 667
L I + + Y N S + I +S
Sbjct: 606 ---LFIAKITPNNNGTYACFVSNLATGRNNSIVKSITVS 641
Score = 153 bits (389), Expect = 2e-38
Identities = 89/568 (15%), Positives = 150/568 (26%), Gaps = 98/568 (17%)
Query: 1666 EFRIIAVNAIGKSEPSICTTPVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTP 1725
+ + + + +E + V I V + CE
Sbjct: 85 FYTLHVIKSDLVNEEATGQFRVYPEL-----PKPSISSNNSKPVEDKDAVAFTCEPETQD 139
Query: 1726 VPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSS-- 1783
W N + + R ++ L VT D Y CE N V + S
Sbjct: 140 -ATYLWWVNNQSLPVSPRLQLSNGNRT--LTLFNVTRNDTASYKCETQNPVSARRSDSVI 196
Query: 1784 -RVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVL 1842
V G P P G+N + A + P + S NG QS
Sbjct: 197 LNVLYG-PDAPTISPLNTSYRSGENLNLSCHAASNPPAQYSWFVNGTFQQSTQEL----- 250
Query: 1843 DDYIIIFIKEIRKEDAGDYTVNLSNSSG--SVSGTFTINITGLPGPPIG------PLDVS 1894
FI I ++G YT NS + + TI + P P P++
Sbjct: 251 ------FIPNITVNNSGSYTCQAHNSDTGLNRTTVTTITVYAEPPKPFITSNNSNPVEDE 304
Query: 1895 EITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHDTTFIVQGLTEGQEY 1954
+ TC Y+ + S+P + + + T + +T
Sbjct: 305 DAVALTCEPEIQNT---------TYLWWVNNQSLPVSPRLQLSNDNRTLTLLSVTRNDVG 355
Query: 1955 LFHVMAVNENGMGPPL-EGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNL---------- 2003
+ +N + + + P D P G ++L
Sbjct: 356 PYECGI--QNELSVDHSDPVILNVLYGPDDPTISPSYTYYRP--GVNLSLSCHAASNPPA 411
Query: 2004 --SW---DKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFR 2058
SW + I N+ E +
Sbjct: 412 QYSWLIDGNIQQHTQE-----------------------------LFISNITEKNSGLYT 442
Query: 2059 VYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPT 2118
A N A + ++ + A I + F C
Sbjct: 443 CQANNSAS-GHSRTTVKTITV---SAELPKPSISSNNSKPVEDKDAVAFTCEPEAQNTTY 498
Query: 2119 ISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNK-GGVKSTKAELII 2177
+ W+ G + + S R + TL + +V DA YVC N +S L +
Sbjct: 499 LWWVNG-QSLPVSPRLQLSNGN--RTLTLFNVTRNDARAYVCGIQNSVSANRSDPVTLDV 555
Query: 2178 MTAPKFNVPPRFRDTAYFESDVVVVVCV 2205
+ P D++Y + + C
Sbjct: 556 LYGPDT-PIISPPDSSYLSGANLNLSCH 582
Score = 140 bits (354), Expect = 4e-34
Identities = 100/619 (16%), Positives = 175/619 (28%), Gaps = 103/619 (16%)
Query: 1302 RFRVRAENQYGVSEPLELDNSITAKFPFTVPDPPGQPQIVDW----------DTNNATLM 1351
+ + V+E + + P + V+ +T +AT +
Sbjct: 85 FYTLHVIKSDLVNEEATGQFRVYPELPKPSISSN-NSKPVEDKDAVAFTCEPETQDATYL 143
Query: 1352 WDRPRTDGGSKIQGYKMLLKTPTGELPTTIWSKIRPTSSTVY-CKDTTMNSSNSEPGKQS 1410
W + S ++ L L T+ + + Y C+ + N ++S
Sbjct: 144 W---WVNNQSLPVSPRLQLSNGNRTL--TL-FNVTRNDTASYKCE-----TQNPVSARRS 192
Query: 1411 GPVI--VEEQPNKPVMDLSGVRDITVKAGEDFSIHVPFMAFPQPAAFWFANDSIIDDSDT 1468
VI V P+ P + + + ++GE+ ++ + P WF N + +
Sbjct: 193 DSVILNVLYGPDAPTISPL---NTSYRSGENLNLSCHAASNPPAQYSWFVNGTFQQSTQE 249
Query: 1469 RVHKQLTMNSASLVVKNSQRSDGGQYRLQLKNPAGFDTATLHSRLRTLPDSVNPRCHLPS 1528
L + N ++ G Y Q N T + + + P +
Sbjct: 250 ------------LFIPNITVNNSGSYTCQAHNSDTGLNRTTVTTITVYAEPPKPFITSNN 297
Query: 1529 STSKE-------RPKFPTHPNHQPWLKWARASLTSKGVDSTEDSISLVWSKP-RHDGGSP 1580
S E + W ++ S + + D+ +L R+D G
Sbjct: 298 SNPVEDEDAVALTCEPEIQNTTYLWWVNNQSLPVSPRLQLSNDNRTLTLLSVTRNDVGP- 356
Query: 1581 IQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEGKSIGSERGSTAQFLEREVGGAI 1640
Y D S +L V G + + + G +
Sbjct: 357 ---YECG-----------IQNELSVDHSDPVILNVLYGPDDPTI---SPSYTYYRPGVNL 399
Query: 1641 WLKCN-------------DYNVLE--CSFSVLNLVEGNDYEFRIIAVNAIGKSEPSICTT 1685
L C+ D N+ + + N+ E N + A N+ TT
Sbjct: 400 SLSCHAASNPPAQYSWLIDGNIQQHTQELFISNITEKNSGLYTCQANNSASGHS---RTT 456
Query: 1686 PVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYR 1745
I I V + CE W NG+ + R +
Sbjct: 457 VKTI-TVSAELPKPSISSNNSKPVEDKDAVAFTCEPEAQNTTY-LWWVNGQSLPVSPRLQ 514
Query: 1746 VETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSS---RVKIGTPPRIDRMPNALYI 1802
+ L VT D Y C NSV + V G P P
Sbjct: 515 LSNGNRT--LTLFNVTRNDARAYVCGIQNSVSANRSDPVTLDVLYG-PDTPIISPPDSSY 571
Query: 1803 PEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYT 1862
G N + A + + S NG Q FI +I + G Y
Sbjct: 572 LSGANLNLSCHSASNPSPQYSWRINGIPQQHTQVL-----------FIAKITPNNNGTYA 620
Query: 1863 VNLSNSSGSVSGTFTINIT 1881
+SN + + + +IT
Sbjct: 621 CFVSNLATGRNNSIVKSIT 639
Score = 114 bits (287), Expect = 8e-26
Identities = 69/472 (14%), Positives = 117/472 (24%), Gaps = 106/472 (22%)
Query: 242 FIKEIRKEDAGDYTVNLSNSSG---SVSGTFTINITGLPGPPIGPLDVSEITKH-----T 293
I+ I + D G YT+++ S +G F + LP P I + + T
Sbjct: 74 LIQNIIQNDTGFYTLHVIKSDLVNEEATGQFRVYPE-LPKPSISSNNSKPVEDKDAVAFT 132
Query: 294 CTLHWNPPKY-----DGGLKVTHYVVERRDISMPHWICISTTCHDTTFIVQGLTEGQEYL 348
C Y + L V+ R +S + T + +T
Sbjct: 133 CEPETQDATYLWWVNNQSLPVSP----RLQLSNG----------NRTLTLFNVTRNDTAS 178
Query: 349 FHVMAVNENGM------------GPPLEGINPIKAKSPYDKP-----SPPGIPVVTQVGG 391
+ N GP I+P+ + P
Sbjct: 179 YKCETQNPVSARRSDSVILNVLYGPDAPTISPLNTSYRSGENLNLSCHAASNPPAQ---- 234
Query: 392 DFVNLSW---DKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQY 448
SW + IPN+
Sbjct: 235 ----YSWFVNGTFQQSTQE-----------------------------LFIPNITVNNSG 261
Query: 449 EFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCP 508
+ A N + + I P I + C
Sbjct: 262 SYTCQAHNSDT---GLNRTTVTTITVYAEPPKP-FITSNNSNPVEDEDAVALTCEPEIQN 317
Query: 509 KPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNK-GGVKSTKAE 567
T W ++ + S R + + T L + SV D Y C N+ S
Sbjct: 318 -TTYLWWVNNQSLPVSPRLQLSNDNRT--LTLLSVTRNDVGPYECGIQNELSVDHSDPVI 374
Query: 568 LIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVET 627
L ++ P T Y+ G N+ + P + +W D + +
Sbjct: 375 LNVLYGPDD-PTISPSYT-YYRPGVNLSLSCHAASNPPAQYSWLIDGNIQQHTQE----- 427
Query: 628 SERHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQISDRPDPPQFPTVE 679
L I + + ++ Y A N S I+ + P+
Sbjct: 428 ------LFISNITEKNSGLYTCQANNSASGHSRTTVKTITVSAELPKPSISS 473
Score = 111 bits (279), Expect = 7e-25
Identities = 47/293 (16%), Positives = 88/293 (30%), Gaps = 23/293 (7%)
Query: 389 VGGDFVNLSWDK-PLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQ 447
+ SW K DG +I GY I + I + + I N+I+
Sbjct: 24 LPQHLFGYSWYKGERVDGNRQIIGYVIGTQQATPGPAYSGREIIYPNASLLIQNIIQNDT 83
Query: 448 YEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGC 507
+ ++ ++ ++ V + P I + F C
Sbjct: 84 GFYTLHVIKSDLVNEEATGQFRVYPELP-----KPSISSNNSKPVEDKDAVAFTCEPETQ 138
Query: 508 PKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNK-GGVKSTKA 566
T W ++ + S R + TL + +V D Y C N +S
Sbjct: 139 D-ATYLWWVNNQSLPVSPRLQLSNGN--RTLTLFNVTRNDTASYKCETQNPVSARRSDSV 195
Query: 567 ELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVE 626
L ++ P P + GEN+ + P + +W+ + +S
Sbjct: 196 ILNVLYGPDA--PTISPLNTSYRSGENLNLSCHAASNPPAQYSWFVNGTFQQSTQE---- 249
Query: 627 TSERHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQISDRPDPPQFPTVE 679
L I + + ++ Y A N + I+ +PP+
Sbjct: 250 -------LFIPNITVNNSGSYTCQAHNSDTGLNRTTVTTITVYAEPPKPFITS 295
Score = 106 bits (265), Expect = 4e-23
Identities = 33/225 (14%), Positives = 64/225 (28%), Gaps = 22/225 (9%)
Query: 454 AQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTIS 513
QNE S+ V + + + + N C P S
Sbjct: 361 IQNELS----VDHSDPVILN--VLYGPDDPTISPSYTYYRPGVNLSLSCHAASNPPAQYS 414
Query: 514 WLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTA 573
WL + L I+++ ++ Y C+A N S I +
Sbjct: 415 WLIDGNIQQHTQ-----------ELFISNITEKNSGLYTCQANNSASGHSRTTVKTITVS 463
Query: 574 PKFNVPPRFRDTAY-FDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSERHA 632
+ P + + + + V W+ + + + + R
Sbjct: 464 AELPKPSISSNNSKPVEDKDAVAFTCEPEAQNTT-YLWWVNGQSLPVSPRLQLSNGNR-- 520
Query: 633 ILTIRDASNVDTAPYRVVAENDLGMD-SAIVKIQISDRPDPPQFP 676
LT+ + + D Y +N + + S V + + PD P
Sbjct: 521 TLTLFNVTRNDARAYVCGIQNSVSANRSDPVTLDVLYGPDTPIIS 565
Score = 103 bits (257), Expect = 3e-22
Identities = 45/307 (14%), Positives = 85/307 (27%), Gaps = 36/307 (11%)
Query: 454 AQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTIS 513
QN S S + + + N + N C P S
Sbjct: 183 TQNPVSARR--SDSVILNVLYG----PDAPTISPLNTSYRSGENLNLSCHAASNPPAQYS 236
Query: 514 WLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTA 573
W + L I ++ ++ Y C+A N + I
Sbjct: 237 WFVNGTFQQSTQ-----------ELFIPNITVNNSGSYTCQAHNSDTGLNRTTVTTITVY 285
Query: 574 PKFNVPP-RFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSERHA 632
+ P ++ + + V + W+ +N+ + + R
Sbjct: 286 AEPPKPFITSNNSNPVEDEDAVALTCEPEIQNTT-YLWWVNNQSLPVSPRLQLSNDNR-- 342
Query: 633 ILTIRDASNVDTAPYRVVAENDLGMD-SAIVKIQISDRPDPPQFPTVEDIGHDSLALVWR 691
LT+ + D PY +N+L +D S V + + PD P + L
Sbjct: 343 TLTLLSVTRNDVGPYECGIQNELSVDHSDPVILNVLYGPDDPTISPSYTYYRPGVNLSLS 402
Query: 692 APIWDGGSNITNYIVEKREHPMSSWIRVGNTRFT--TMAITGLSPGHQYEFRVYAENVYG 749
+ Y SW+ GN + + I+ ++ + + A N
Sbjct: 403 CHA--ASNPPAQY----------SWLIDGNIQQHTQELFISNITEKNSGLYTCQANNSAS 450
Query: 750 RSDPSTT 756
+T
Sbjct: 451 GHSRTTV 457
Score = 88.5 bits (219), Expect = 1e-17
Identities = 33/208 (15%), Positives = 62/208 (29%), Gaps = 30/208 (14%)
Query: 491 NAIQNHNAQFQCTITGCPKPTISWLKGSREIT-------------------PSARHHIFA 531
N + SW KG R S R I+
Sbjct: 10 NVAEGKEVLLLVHNLPQHLFGYSWYKGERVDGNRQIIGYVIGTQQATPGPAYSGREIIYP 69
Query: 532 EGDTYTLIINSVYGVDADEYVCRAVNKGGV--KSTKAELIIMTAPKFNVPPRFRDTAYFD 589
+L+I ++ D Y + V ++T + PK ++ ++ +
Sbjct: 70 NA---SLLIQNIIQNDTGFYTLHVIKSDLVNEEATGQFRVYPELPKPSISS--NNSKPVE 124
Query: 590 KGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAPYRV 649
+ V W+ +N+ + + R LT+ + + DTA Y+
Sbjct: 125 DKDAVAFTCEPETQD-ATYLWWVNNQSLPVSPRLQLSNGNR--TLTLFNVTRNDTASYKC 181
Query: 650 VAENDLGMD-SAIVKIQISDRPDPPQFP 676
+N + S V + + PD P
Sbjct: 182 ETQNPVSARRSDSVILNVLYGPDAPTIS 209
Score = 82.7 bits (204), Expect = 8e-16
Identities = 33/225 (14%), Positives = 59/225 (26%), Gaps = 28/225 (12%)
Query: 102 VPLGKLLTLQCEATGTPVPKCRWLRNGREISSG--ARYRVETAGGVF------------- 146
V GK + L + W + R + Y + T
Sbjct: 11 VAEGKEVLLLVHNLPQHLFGYSWYKGERVDGNRQIIGYVIGTQQATPGPAYSGREIIYPN 70
Query: 147 -RLHFNEVTDVDNGDYTCEAYNSVGFAHTSS---RVKIGTPPRIDRMPNALYIPEGDNTK 202
L + D G YT S ++ RV P N+ + + D
Sbjct: 71 ASLLIQNIIQNDTGFYTLHVIKSDLVNEEATGQFRVYPELPKPSISSNNSKPVEDKDAVA 130
Query: 203 VKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSS 262
Q N + + R + + + + + + + D Y N
Sbjct: 131 FTCEPET-QDATYLWWVNNQSLPVSPRLQ--LSNGNRTLTLFNVTRNDTASYKCETQNPV 187
Query: 263 GS-VSGTFTINITGLPGPPIGPLDVSEITKH-----TCTLHWNPP 301
+ S + +N+ P P + +C NPP
Sbjct: 188 SARRSDSVILNVLYGPDAPTISPLNTSYRSGENLNLSCHAASNPP 232
Score = 82.7 bits (204), Expect = 8e-16
Identities = 33/225 (14%), Positives = 59/225 (26%), Gaps = 28/225 (12%)
Query: 1709 VPLGKLLTLQCEATGTPVPKCRWLRNGREISSG--ARYRVETAGGVF------------- 1753
V GK + L + W + R + Y + T
Sbjct: 11 VAEGKEVLLLVHNLPQHLFGYSWYKGERVDGNRQIIGYVIGTQQATPGPAYSGREIIYPN 70
Query: 1754 -RLHFNEVTDVDNGDYTCEAYNSVGFAHTSS---RVKIGTPPRIDRMPNALYIPEGDNTK 1809
L + D G YT S ++ RV P N+ + + D
Sbjct: 71 ASLLIQNIIQNDTGFYTLHVIKSDLVNEEATGQFRVYPELPKPSISSNNSKPVEDKDAVA 130
Query: 1810 VKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSS 1869
Q N + + R + + + + + + + D Y N
Sbjct: 131 FTCEPET-QDATYLWWVNNQSLPVSPRLQ--LSNGNRTLTLFNVTRNDTASYKCETQNPV 187
Query: 1870 GS-VSGTFTINITGLPGPPIGPLDVSEITKH-----TCTLHWNPP 1908
+ S + +N+ P P + +C NPP
Sbjct: 188 SARRSDSVILNVLYGPDAPTISPLNTSYRSGENLNLSCHAASNPP 232
Score = 75.4 bits (185), Expect = 1e-13
Identities = 78/502 (15%), Positives = 144/502 (28%), Gaps = 70/502 (13%)
Query: 1048 WIKASMAHIPDTSLKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFR 1107
W K + YV+ + + G + L+ ++I+N +
Sbjct: 33 WYKGERVDGNRQIIGYVIGTQQATPGPAYSGREIIYPNASLLI-----QNIIQNDTGFYT 87
Query: 1108 VCAVNAAGQGPWSSSSDIIMCCAPPCAPKITSDLSIRDMTVLAGEEFTITVPFSGRPKPT 1167
+ + + ++ + P P I+S+ V + T + T
Sbjct: 88 LHVIKSDLVNEEATGQFRVYPELPK--PSISSN---NSKPVEDKDAVAFTCEPETQD-AT 141
Query: 1168 PIWTVNGDEVSPDGRIKFETSENQTIYRNKSAKRATDSGSYTIQLVNTVGSD-SASCKVY 1226
+W VN + R++ S + R D+ SY + N V + S S +
Sbjct: 142 YLWWVNNQSLPVSPRLQL--SNGNRTLTLFNVTR-NDTASYKCETQNPVSARRSDSVILN 198
Query: 1227 VVDKPSPPQGPLDVSDITP-ESCSLSWKPPLDDGGSPITNYVVEKYESATGFWSKLSSFV 1285
V+ P P + E+ +LS +P Y W +F
Sbjct: 199 VLYGPDAPTISPLNTSYRSGENLNLSCHAA----SNPPAQY----------SWFVNGTFQ 244
Query: 1286 RS-PAYDVFGLETNRQYRFRVRAENQYG---VSEPLELDNSITAKFPFTVPDPP-----G 1336
+S + + N + +A N + + PF +
Sbjct: 245 QSTQELFIPNITVNNSGSYTCQAHNSDTGLNRTTVTTITVYAEPPKPFITSNNSNPVEDE 304
Query: 1337 QPQIVD--WDTNNATLMWDRPRTDGGSKIQGYKMLLKTPTGELPTTIWSKIRPTSSTVY- 1393
+ + N T +W + S ++ L L T+ + Y
Sbjct: 305 DAVALTCEPEIQNTTYLWWV---NNQSLPVSPRLQLSNDNRTL--TL-LSVTRNDVGPYE 358
Query: 1394 CKDTTMNSSNSEPGKQSGPVI--VEEQPNKPVMDLSGVRDITVKAGEDFSIHVPFMAFPQ 1451
C N S PVI V P+ P + S + G + S+ + P
Sbjct: 359 CG-----IQNELSVDHSDPVILNVLYGPDDPTISPS---YTYYRPGVNLSLSCHAASNPP 410
Query: 1452 PAAFWFANDSIIDDSDTRVHKQLTMNSASLVVKNSQRSDGGQYRLQLKNPAGFDTATLHS 1511
W + +I + L + N + G Y Q N A + T
Sbjct: 411 AQYSWLIDGNIQQHTQE------------LFISNITEKNSGLYTCQANNSASGHSRTTVK 458
Query: 1512 RLRTLPDSVNPRCHLPSSTSKE 1533
+ + P +S E
Sbjct: 459 TITVSAELPKPSISSNNSKPVE 480
Score = 70.8 bits (173), Expect = 4e-12
Identities = 67/423 (15%), Positives = 123/423 (29%), Gaps = 75/423 (17%)
Query: 1108 VC-AVNAAGQGPWSSSSDIIMCCAPPCAPKITSDLSIRDMTVLAGEEFTITVPFSGRPKP 1166
C A N+ ++ + I + PP P ITS+ V + +T +
Sbjct: 264 TCQAHNSDTGLNRTTVTTITVYAEPP-KPFITSN---NSNPVEDEDAVALTCEPEIQNTT 319
Query: 1167 TPIWTVNGDEVSPDGRIKFETSENQ-TIYRNKSAKRATDSGSYTIQLVNTVGSD-SASCK 1224
+W VN + R++ T+ D G Y + N + D S
Sbjct: 320 Y-LWWVNNQSLPVSPRLQLSNDNRTLTLLSV----TRNDVGPYECGIQNELSVDHSDPVI 374
Query: 1225 VYVVDKPSPPQGPLDVSDITPES-----CSLSWKPPLDDGGSPITNYVVEKYESATGFWS 1279
+ V+ P P + P C + +P Y W
Sbjct: 375 LNVLYGPDDPTISPSYTYYRPGVNLSLSCHAA--------SNPPAQY----------SWL 416
Query: 1280 KLSSFVRS-PAYDVFGLETNRQYRFRVRAENQYG-VSEPLELDNSITAKFPFTVPDPPGQ 1337
+ + + + + +A N S +++A+ P
Sbjct: 417 IDGNIQQHTQELFISNITEKNSGLYTCQANNSASGHSRTTVKTITVSAELPKPSISSNNS 476
Query: 1338 PQIVDWDT---------NNATLMWDRPRTDGGSKIQGYKMLLKTPTGELPTTIWSKIRPT 1388
+ D D N T +W +G S ++ L L T+ +
Sbjct: 477 KPVEDKDAVAFTCEPEAQNTTYLWWV---NGQSLPVSPRLQLSNGNRTL--TL-FNVTRN 530
Query: 1389 SSTVY-CKDTTMNSSNSEPGKQSGPV--IVEEQPNKPVMDLSGVRDITVKAGEDFSIHVP 1445
+ Y C NS +S PV V P+ P++ D + +G + ++
Sbjct: 531 DARAYVCG-----IQNSVSANRSDPVTLDVLYGPDTPIISPP---DSSYLSGANLNLSCH 582
Query: 1446 FMAFPQPAAFWFANDSIIDDSDTRVHKQLTMNSASLVVKNSQRSDGGQYRLQLKNPAGFD 1505
+ P P W N ++ L + ++ G Y + N A
Sbjct: 583 SASNPSPQYSWRINGIPQQ------------HTQVLFIAKITPNNNGTYACFVSNLATGR 630
Query: 1506 TAT 1508
+
Sbjct: 631 NNS 633
Score = 69.6 bits (170), Expect = 9e-12
Identities = 65/392 (16%), Positives = 120/392 (30%), Gaps = 58/392 (14%)
Query: 1131 PPCAPKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSEN 1190
P AP I+ + + +GE ++ + P W VNG +
Sbjct: 202 GPDAPTIS----PLNTSYRSGENLNLSCHAASNPPAQYSWFVNGTFQQSTQELFI----- 252
Query: 1191 QTIYRNKSAKRATDSGSYTIQLVNTVGSDSASCKVY--VVDKPSPPQGPLDVSDITPESC 1248
+SGSYT Q N+ + + V +P P + S+ +
Sbjct: 253 -------PNITVNNSGSYTCQAHNSDTGLNRTTVTTITVYAEPPKPFITSNNSNPVEDED 305
Query: 1249 SLSWKPPLDDGGSPITNYVVEKYESATGFWSKLSSFVRSPAYDVFGLETNRQYRFRVRAE 1308
+++ + + +V + + +LS+ R+ Y +
Sbjct: 306 AVALTCEPEIQNTTYLWWVNNQSLPVSP-RLQLSNDNRTLTLLSVTRNDVGPYE--CGIQ 362
Query: 1309 NQYG--VSEPLELDNSITAKFPFTVPDP----PGQPQIVDWD-----TNNATLMWDRPRT 1357
N+ S+P+ L+ P P PG + A W
Sbjct: 363 NELSVDHSDPVILNVLYGPDDPTISPSYTYYRPGVN--LSLSCHAASNPPAQYSWLID-- 418
Query: 1358 DGGSKIQGYKMLLKTPTGELPTTIWSKIRPTSSTVYCKDTTMNSSNSEPGKQ-SGPVIVE 1416
G+ Q T EL I S I +S +Y T ++NS G + +
Sbjct: 419 --GNIQQ--------HTQEL--FI-SNITEKNSGLY----TCQANNSASGHSRTTVKTIT 461
Query: 1417 EQPNKPVMDLSGVRDITVKAGEDFSIHVPFMAFPQPAAFWFANDSIIDDSDTRVHKQLTM 1476
P +S V+ + + A +W S+ QL+
Sbjct: 462 VSAELPKPSISSNNSKPVEDKDAVAFTCEPEAQNTTYLWWVNGQSLPVSP----RLQLSN 517
Query: 1477 NSASLVVKNSQRSDGGQYRLQLKNPAGFDTAT 1508
+ +L + N R+D Y ++N + +
Sbjct: 518 GNRTLTLFNVTRNDARAYVCGIQNSVSANRSD 549
Score = 68.4 bits (167), Expect = 2e-11
Identities = 35/211 (16%), Positives = 65/211 (30%), Gaps = 11/211 (5%)
Query: 1996 VGGDFVNLSWDK-PLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQ 2054
+ SW K DG +I GY I + I + + I N+I+
Sbjct: 24 LPQHLFGYSWYKGERVDGNRQIIGYVIGTQQATPGPAYSGREIIYPNASLLIQNIIQNDT 83
Query: 2055 YEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGC 2114
+ ++ ++ ++ V + P I + F C
Sbjct: 84 GFYTLHVIKSDLVNEEATGQFRVYPELP-----KPSISSNNSKPVEDKDAVAFTCEPETQ 138
Query: 2115 PKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNK-GGVKSTKA 2173
T W ++ + S R + TL + +V D Y C N +S
Sbjct: 139 D-ATYLWWVNNQSLPVSPRLQLSNGN--RTLTLFNVTRNDTASYKCETQNPVSARRSDSV 195
Query: 2174 ELIIMTAPKFNVPPRFRDTAYFESDVVVVVC 2204
L ++ P +T+Y + + + C
Sbjct: 196 ILNVLYGPDAPTIS-PLNTSYRSGENLNLSC 225
Score = 68.1 bits (166), Expect = 3e-11
Identities = 16/117 (13%), Positives = 30/117 (25%), Gaps = 17/117 (14%)
Query: 2061 AQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTIS 2120
QN + S ++ + I+ +++ + N C P P S
Sbjct: 539 IQNSVSAN--RSDPVTLDVLYG----PDTPIISPPDSSYLSGANLNLSCHSASNPSPQYS 592
Query: 2121 WLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELII 2177
W + L I + + Y C N ++ I
Sbjct: 593 WRINGIPQQHTQ-----------VLFIAKITPNNNGTYACFVSNLATGRNNSIVKSI 638
Score = 66.5 bits (162), Expect = 7e-11
Identities = 57/391 (14%), Positives = 93/391 (23%), Gaps = 94/391 (24%)
Query: 1849 FIKEIRKEDAGDYTVNLSNSSG---SVSGTFTINITGLPGPPIGPLDVSEITKH-----T 1900
I+ I + D G YT+++ S +G F + LP P I + + T
Sbjct: 74 LIQNIIQNDTGFYTLHVIKSDLVNEEATGQFRVYPE-LPKPSISSNNSKPVEDKDAVAFT 132
Query: 1901 CTLHWNPPKY-----DGGLKVTHYVVERRDISMPHWICISTTCHDTTFIVQGLTEGQEYL 1955
C Y + L V+ R +S + T + +T
Sbjct: 133 CEPETQDATYLWWVNNQSLPVSP----RLQLSNG----------NRTLTLFNVTRNDTAS 178
Query: 1956 FHVMAVNENGM------------GPPLEGINPIKAKSPYDKP-----SPPGIPVVTQVGG 1998
+ N GP I+P+ + P
Sbjct: 179 YKCETQNPVSARRSDSVILNVLYGPDAPTISPLNTSYRSGENLNLSCHAASNPPAQ---- 234
Query: 1999 DFVNLSW---DKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQY 2055
SW + IPN+
Sbjct: 235 ----YSWFVNGTFQQSTQE-----------------------------LFIPNITVNNSG 261
Query: 2056 EFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCP 2115
+ A N + + I P I + C
Sbjct: 262 SYTCQAHNSDT---GLNRTTVTTITVYAEPPKP-FITSNNSNPVEDEDAVALTCEPEIQN 317
Query: 2116 KPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNK-GGVKSTKAE 2174
T W ++ + S R + + T L + SV D Y C N+ S
Sbjct: 318 -TTYLWWVNNQSLPVSPRLQLSNDNRT--LTLLSVTRNDVGPYECGIQNELSVDHSDPVI 374
Query: 2175 LIIMTAPKFNVPPRFRDTAYFESDVVVVVCV 2205
L ++ P T Y + + C
Sbjct: 375 LNVLYGPDD-PTISPSYTYYRPGVNLSLSCH 404
Score = 56.5 bits (136), Expect = 8e-08
Identities = 56/406 (13%), Positives = 113/406 (27%), Gaps = 90/406 (22%)
Query: 1148 VLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQTIYRNKSAKRAT---- 1203
V G+E + V + W I + Q + R
Sbjct: 11 VAEGKEVLLLVHNLPQHLFGYSWYKGERVDGNRQIIGYVIGTQQATPGPAYSGREIIYPN 70
Query: 1204 -----------DSGSYTIQLVNTV-GSDSASCKVYVVDKPSPPQGPLDVSDITPE----- 1246
D+G YT+ ++ + ++ A+ + V + P + S +
Sbjct: 71 ASLLIQNIIQNDTGFYTLHVIKSDLVNEEATGQFRVYPELPKPSISSNNSKPVEDKDAVA 130
Query: 1247 -SCSLSWKPP-----LDDGGSPITNYVVEKYESATGFWSKLSSFVRSPAYDVFGLETNRQ 1300
+C + +++ P++ + + T +F + N
Sbjct: 131 FTCEPETQDATYLWWVNNQSLPVSPRLQLSNGNRT--------------LTLFNVTRNDT 176
Query: 1301 YRFRVRAENQYG--VSEPLELDNSITAKFPFTVPDP---------------PGQPQIVDW 1343
++ +N S+ + L+ P P P
Sbjct: 177 ASYKCETQNPVSARRSDSVILNVLYGPDAPTISPLNTSYRSGENLNLSCHAASNPP---- 232
Query: 1344 DTNNATLMWDRPRTDGGSKIQGYKMLLKTPTGELPTTIWSKIRPTSSTVY-CKDTTMNSS 1402
A W G+ Q T EL I I +S Y C NS
Sbjct: 233 ----AQYSWFV----NGTFQQ--------STQEL--FI-PNITVNNSGSYTC--QAHNSD 271
Query: 1403 NSEPGKQSGPVIVEEQPNKPVMDLSGVRDITVKAGEDFSIHVPFMAFPQPAAFWFANDSI 1462
+ V +P KP + + V+ + ++ +W N S+
Sbjct: 272 TGLNRTTVTTITVYAEPPKPFITSN--NSNPVEDEDAVALTCEPEIQNTTYLWWVNNQSL 329
Query: 1463 IDDSDTRVHKQLTMNSASLVVKNSQRSDGGQYRLQLKNPAGFDTAT 1508
++ ++ +L + + R+D G Y ++N D +
Sbjct: 330 PVSPRLQLSN----DNRTLTLLSVTRNDVGPYECGIQNELSVDHSD 371
Score = 51.5 bits (123), Expect = 3e-06
Identities = 28/150 (18%), Positives = 58/150 (38%), Gaps = 10/150 (6%)
Query: 1094 RVTSLIENHEYEFRVCAVNAAGQGPWSSSSDIIMCCAPPCAPKITSDLSIRDMTVLAGEE 1153
++++ E + + A N+A S + + PK + + V +
Sbjct: 429 FISNITEKNSGLYTCQANNSASG---HSRTTVKTITVSAELPKPSISSN-NSKPVEDKDA 484
Query: 1154 FTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQTIYRNKSAKRATDSGSYTIQLV 1213
T + +W VNG + R++ ++ N+T+ + R D+ +Y +
Sbjct: 485 VAFTCEPEAQNTTY-LWWVNGQSLPVSPRLQL-SNGNRTL-TLFNVTRN-DARAYVCGIQ 540
Query: 1214 NTVGSD-SASCKVYVVDKPS-PPQGPLDVS 1241
N+V ++ S + V+ P P P D S
Sbjct: 541 NSVSANRSDPVTLDVLYGPDTPIISPPDSS 570
Score = 47.6 bits (113), Expect = 5e-05
Identities = 20/128 (15%), Positives = 33/128 (25%), Gaps = 25/128 (19%)
Query: 2098 NAIQNHNAQFQCTITGCPKPTISWLKGSREIT-------------------PSARHHIFA 2138
N + SW KG R S R I+
Sbjct: 10 NVAEGKEVLLLVHNLPQHLFGYSWYKGERVDGNRQIIGYVIGTQQATPGPAYSGREIIYP 69
Query: 2139 EGDTYTLIINSVYGVDADEYVCRAVNKGGV--KSTKAELIIMTAPKFNVPPRFRDTAYFE 2196
+L+I ++ D Y + V ++T + PK ++ +
Sbjct: 70 NA---SLLIQNIIQNDTGFYTLHVIKSDLVNEEATGQFRVYPELPKPSISSN-NSKPVED 125
Query: 2197 SDVVVVVC 2204
D V C
Sbjct: 126 KDAVAFTC 133
Score = 43.4 bits (102), Expect = 0.001
Identities = 12/83 (14%), Positives = 25/83 (30%), Gaps = 12/83 (14%)
Query: 1145 DMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQTIYRNKSAKRATD 1204
D + L+G ++ + P P W +NG + +
Sbjct: 568 DSSYLSGANLNLSCHSASNPSPQYSWRINGIPQQHTQVLFIAKI------------TPNN 615
Query: 1205 SGSYTIQLVNTVGSDSASCKVYV 1227
+G+Y + N + S +
Sbjct: 616 NGTYACFVSNLATGRNNSIVKSI 638
Score = 41.5 bits (97), Expect = 0.004
Identities = 14/106 (13%), Positives = 31/106 (29%), Gaps = 17/106 (16%)
Query: 590 KGENVVVKIPFTGYPKPKITWYRD----------------NEVIESGGHFHVETSERHAI 633
+G+ V++ + +WY+ + + E +A
Sbjct: 13 EGKEVLLLVHNLPQHLFGYSWYKGERVDGNRQIIGYVIGTQQATPGPAYSGREIIYPNAS 72
Query: 634 LTIRDASNVDTAPYRVVAENDLGMDSAIVKIQISDRPDPPQFPTVE 679
L I++ DT Y + + + Q P+ P+
Sbjct: 73 LLIQNIIQNDTGFYTLHVIKSDLV-NEEATGQFRVYPELPKPSISS 117
>2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor;
2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A
1lwr_A
Length = 209
Score = 173 bits (440), Expect = 4e-49
Identities = 42/198 (21%), Positives = 73/198 (36%), Gaps = 10/198 (5%)
Query: 277 PGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDIS----MPHWICISTTCH 332
P P +D E T + ++ P+ GG+ + Y E R + W
Sbjct: 9 PSSP--SIDQVEPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASM 66
Query: 333 DTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGD 392
+ + GL Y + A+N G+G P +PS P + G+
Sbjct: 67 EGIVTIVGLKPETTYAVRLAALNGKGLGEISAASEF--KTQPVREPSAPKLEGQMGEDGN 124
Query: 393 FVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRV 452
+ ++ K DDGGS I+ Y + + S+ W+ + + +L +YE V
Sbjct: 125 SIKVNLIKQ-DDGGSPIRHYLVRYRALSSE-WKPEIRLPSGSDHVMLKSLDWNAEYEVYV 182
Query: 453 YAQNEAGLSLPSSASNSV 470
A+N+ G S +
Sbjct: 183 VAENQQGKSKAAHFVFRT 200
Score = 173 bits (440), Expect = 4e-49
Identities = 42/198 (21%), Positives = 73/198 (36%), Gaps = 10/198 (5%)
Query: 1884 PGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDIS----MPHWICISTTCH 1939
P P +D E T + ++ P+ GG+ + Y E R + W
Sbjct: 9 PSSP--SIDQVEPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASM 66
Query: 1940 DTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGD 1999
+ + GL Y + A+N G+G P +PS P + G+
Sbjct: 67 EGIVTIVGLKPETTYAVRLAALNGKGLGEISAASEF--KTQPVREPSAPKLEGQMGEDGN 124
Query: 2000 FVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRV 2059
+ ++ K DDGGS I+ Y + + S+ W+ + + +L +YE V
Sbjct: 125 SIKVNLIKQ-DDGGSPIRHYLVRYRALSSE-WKPEIRLPSGSDHVMLKSLDWNAEYEVYV 182
Query: 2060 YAQNEAGLSLPSSASNSV 2077
A+N+ G S +
Sbjct: 183 VAENQQGKSKAAHFVFRT 200
Score = 168 bits (426), Expect = 3e-47
Identities = 48/233 (20%), Positives = 72/233 (30%), Gaps = 41/233 (17%)
Query: 896 FEVLDRPHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTKVSSYV 955
D P P + ++ + + + P GG I Y E + VW
Sbjct: 3 LAQADTPSSPSIDQVEPYS-STAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDA 61
Query: 956 TTP----FVRVRNLAIGSTYEFRVMAENQYGLSKPALTIDPIKAKHPFDVPGAPGAPKGV 1011
V + L +TY R+ A N GL + + + P P AP +
Sbjct: 62 KEASMEGIVTIVGLKPETTYAVRLAALNGKGLGEISAASEF--KTQPVREPSAPKLEGQM 119
Query: 1012 DSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEGK 1071
+SI + K DGGSPI+ Y+V R +S + W +
Sbjct: 120 GEDGNSIKVNLIKQ-DDGGSPIRHYLVRYRALSSE-WKPEIRLPSGSDHVM--------- 168
Query: 1072 SIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPWSSSSD 1124
+ SL N EYE V A N G+ +
Sbjct: 169 -----------------------LKSLDWNAEYEVYVVAENQQGKSKAAHFVF 198
Score = 136 bits (345), Expect = 2e-36
Identities = 34/170 (20%), Positives = 53/170 (31%), Gaps = 9/170 (5%)
Query: 1227 VVDKPSPPQGPLDVSDITPESCSLSWKPPLDDGGSPITNYVVEKYESATGFWSKLSSFVR 1286
D PS P + + + + P GG PI Y E W +
Sbjct: 5 QADTPSSPSID--QVEPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAK 62
Query: 1287 SPA----YDVFGLETNRQYRFRVRAENQYGVSEPLELDNSITAKFPFTVPDPPGQPQIVD 1342
+ + GL+ Y R+ A N G+ E S P P P +
Sbjct: 63 EASMEGIVTIVGLKPETTYAVRLAALNGKGLGEISA--ASEFKTQPVREPSAPKLEGQMG 120
Query: 1343 WDTNNATLMWDRPRTDGGSKIQGYKMLLKTPTGELPTTIWSKIRPTSSTV 1392
D N+ + + DGGS I+ Y + + + E I +
Sbjct: 121 EDGNSIKVNLIKQ-DDGGSPIRHYLVRYRALSSEWKPEIRLPSGSDHVML 169
Score = 100 bits (250), Expect = 1e-23
Identities = 25/104 (24%), Positives = 34/104 (32%), Gaps = 6/104 (5%)
Query: 663 KIQISDRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSWIRVGNT 722
+ +D P P VE + + + P GG I Y E R W
Sbjct: 2 PLAQADTPSSPSIDQVE-PYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYD 60
Query: 723 RF-----TTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLIT 761
+ I GL P Y R+ A N G + S S+ T
Sbjct: 61 AKEASMEGIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKT 104
Score = 100 bits (250), Expect = 1e-23
Identities = 41/219 (18%), Positives = 62/219 (28%), Gaps = 35/219 (15%)
Query: 373 SPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAIC 432
+ D PS P I V + +D+P GG I Y + VG + W
Sbjct: 4 AQADTPSSPSIDQVE-PYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAK 62
Query: 433 APS---QINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRN 489
S + I L Y R+ A N GL S+AS + +
Sbjct: 63 EASMEGIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQPVREPSAPKLEGQMGED 122
Query: 490 ANAIQ------NHNAQFQCTITG-----CPKPTISWLKGSREITPSARHHI--FAEGDTY 536
N+I+ + I + W R + S + Y
Sbjct: 123 GNSIKVNLIKQDDGG---SPIRHYLVRYRALSS-EWKPEIRLPSGSDHVMLKSLDWNAEY 178
Query: 537 TLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPK 575
+ + A N+ G S A + TA
Sbjct: 179 EVYV-------------VAENQQGK-SKAAHFVFRTAAA 203
Score = 100 bits (250), Expect = 1e-23
Identities = 41/219 (18%), Positives = 62/219 (28%), Gaps = 35/219 (15%)
Query: 1980 SPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAIC 2039
+ D PS P I V + +D+P GG I Y + VG + W
Sbjct: 4 AQADTPSSPSIDQVE-PYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAK 62
Query: 2040 APS---QINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRN 2096
S + I L Y R+ A N GL S+AS + +
Sbjct: 63 EASMEGIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQPVREPSAPKLEGQMGED 122
Query: 2097 ANAIQ------NHNAQFQCTITG-----CPKPTISWLKGSREITPSARHHI--FAEGDTY 2143
N+I+ + I + W R + S + Y
Sbjct: 123 GNSIKVNLIKQDDGG---SPIRHYLVRYRALSS-EWKPEIRLPSGSDHVMLKSLDWNAEY 178
Query: 2144 TLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPK 2182
+ + A N+ G S A + TA
Sbjct: 179 EVYV-------------VAENQQGK-SKAAHFVFRTAAA 203
Score = 96.8 bits (241), Expect = 2e-22
Identities = 27/155 (17%), Positives = 47/155 (30%), Gaps = 34/155 (21%)
Query: 998 PFDVPGAPGAPKG--VDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKAS-MA 1054
P P +P V+ + + + +P GG PI +Y E R + ++ W A
Sbjct: 2 PLAQADTPSSPSIDQVEPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDA 61
Query: 1055 HIPDTSLKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAA 1114
+ L Y R+ A+N
Sbjct: 62 KEASMEGIVT------------------------------IVGLKPETTYAVRLAALNGK 91
Query: 1115 GQGPWSSSSDIIMC-CAPPCAPKITSDLSIRDMTV 1148
G G S++S+ P APK+ + ++
Sbjct: 92 GLGEISAASEFKTQPVREPSAPKLEGQMGEDGNSI 126
Score = 94.5 bits (235), Expect = 1e-21
Identities = 37/171 (21%), Positives = 57/171 (33%), Gaps = 11/171 (6%)
Query: 599 PFTGYPKPKITWYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAPYRVVAENDLGM- 657
P Y K W E + + + + I+TI T R+ A N G+
Sbjct: 38 PILKY---KAEWRAVGEEVWHSKWYDAKEASMEGIVTIVGLKPETTYAVRLAALNGKGLG 94
Query: 658 ---DSAIVKIQISDRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMS 714
++ K Q P P+ +S+ + DGGS I +Y+V R S
Sbjct: 95 EISAASEFKTQPVREPSAPKLEGQMGEDGNSIKVNLIKQ-DDGGSPIRHYLVRYRALS-S 152
Query: 715 SWIRVGNTRF--TTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTK 763
W + + L +YE V AEN G+S +
Sbjct: 153 EWKPEIRLPSGSDHVMLKSLDWNAEYEVYVVAENQQGKSKAAHFVFRTAAA 203
Score = 87.2 bits (216), Expect = 4e-19
Identities = 32/126 (25%), Positives = 53/126 (42%), Gaps = 8/126 (6%)
Query: 1207 SYTIQL--VNTVG----SDSASCKVYVVDKPSPPQGPLDVSDITPESCSLSWKPPLDDGG 1260
+Y ++L +N G S ++ K V +PS P+ S ++ DDGG
Sbjct: 80 TYAVRLAALNGKGLGEISAASEFKTQPVREPSAPKLEG-QMGEDGNSIKVNLIKQ-DDGG 137
Query: 1261 SPITNYVVEKYESATGFWSKLSSFVRSPAYDVFGLETNRQYRFRVRAENQYGVSEPLELD 1320
SPI +Y+V ++ + ++ S + L+ N +Y V AENQ G S+
Sbjct: 138 SPIRHYLVRYRALSSEWKPEIRLPSGSDHVMLKSLDWNAEYEVYVVAENQQGKSKAAHFV 197
Query: 1321 NSITAK 1326
A
Sbjct: 198 FRTAAA 203
Score = 85.3 bits (211), Expect = 2e-18
Identities = 27/97 (27%), Positives = 45/97 (46%), Gaps = 1/97 (1%)
Query: 902 PHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTKVSSYVTTPFVR 961
P P+ G+S+ + D+GGS I +Y+V + +S ++ + V
Sbjct: 110 PSAPKLEGQMGEDGNSIKVNLIKQ-DDGGSPIRHYLVRYRALSSEWKPEIRLPSGSDHVM 168
Query: 962 VRNLAIGSTYEFRVMAENQYGLSKPALTIDPIKAKHP 998
+++L + YE V+AENQ G SK A + A H
Sbjct: 169 LKSLDWNAEYEVYVVAENQQGKSKAAHFVFRTAAAHH 205
Score = 83.7 bits (207), Expect = 5e-18
Identities = 17/99 (17%), Positives = 32/99 (32%), Gaps = 1/99 (1%)
Query: 277 PGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHDTTF 336
++ ++ DGG + HY+V R +S I
Sbjct: 109 EPSAPKLEGQMGEDGNSIKVNLIKQ-DDGGSPIRHYLVRYRALSSEWKPEIRLPSGSDHV 167
Query: 337 IVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPY 375
+++ L EY +V+A N+ G + A +
Sbjct: 168 MLKSLDWNAEYEVYVVAENQQGKSKAAHFVFRTAAAHHH 206
Score = 83.7 bits (207), Expect = 5e-18
Identities = 17/99 (17%), Positives = 32/99 (32%), Gaps = 1/99 (1%)
Query: 1884 PGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHDTTF 1943
++ ++ DGG + HY+V R +S I
Sbjct: 109 EPSAPKLEGQMGEDGNSIKVNLIKQ-DDGGSPIRHYLVRYRALSSEWKPEIRLPSGSDHV 167
Query: 1944 IVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPY 1982
+++ L EY +V+A N+ G + A +
Sbjct: 168 MLKSLDWNAEYEVYVVAENQQGKSKAAHFVFRTAAAHHH 206
Score = 72.2 bits (177), Expect = 6e-14
Identities = 19/123 (15%), Positives = 34/123 (27%), Gaps = 42/123 (34%)
Query: 1559 VDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEG 1618
V+ + + + +P GG PI +Y E R + ++ W
Sbjct: 17 VEPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYD---------------- 60
Query: 1619 KSIGSERGSTAQFLEREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKS 1678
+E +++ L Y R+ A+N G
Sbjct: 61 --------------------------AKEASMEGIVTIVGLKPETTYAVRLAALNGKGLG 94
Query: 1679 EPS 1681
E S
Sbjct: 95 EIS 97
Score = 64.1 bits (156), Expect = 3e-11
Identities = 22/123 (17%), Positives = 36/123 (29%), Gaps = 47/123 (38%)
Query: 1559 VDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEG 1618
+ +SI + K DGGSPI+ Y+V R +S +
Sbjct: 119 MGEDGNSIKVNLIKQ-DDGGSPIRHYLVRYRALSSE------------------------ 153
Query: 1619 KSIGSERGSTAQFLEREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKS 1678
W + +L +YE ++A N GKS
Sbjct: 154 ----------------------WKPEIRLPSGSDHVMLKSLDWNAEYEVYVVAENQQGKS 191
Query: 1679 EPS 1681
+ +
Sbjct: 192 KAA 194
Score = 59.1 bits (143), Expect = 2e-09
Identities = 15/56 (26%), Positives = 21/56 (37%), Gaps = 3/56 (5%)
Query: 22 YIIERREVGGAIWLKCNDYNVL---ECSFSVLNLVEGNDYEFRIIAVNAIGKSEPS 74
Y E R VG +W E +++ L Y R+ A+N G E S
Sbjct: 42 YKAEWRAVGEEVWHSKWYDAKEASMEGIVTIVGLKPETTYAVRLAALNGKGLGEIS 97
Score = 58.3 bits (141), Expect = 3e-09
Identities = 11/53 (20%), Positives = 21/53 (39%), Gaps = 1/53 (1%)
Query: 22 YIIERREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPS 74
Y++ R + W + +L +YE ++A N GKS+ +
Sbjct: 143 YLVRYRALSSE-WKPEIRLPSGSDHVMLKSLDWNAEYEVYVVAENQQGKSKAA 194
Score = 56.0 bits (135), Expect = 2e-08
Identities = 16/72 (22%), Positives = 24/72 (33%), Gaps = 2/72 (2%)
Query: 1328 PFTVPDPPGQPQIVDWDTNN--ATLMWDRPRTDGGSKIQGYKMLLKTPTGELPTTIWSKI 1385
P D P P I + + A + +D P GG I YK + E+ + W
Sbjct: 2 PLAQADTPSSPSIDQVEPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDA 61
Query: 1386 RPTSSTVYCKDT 1397
+ S
Sbjct: 62 KEASMEGIVTIV 73
>2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding;
2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1
PDB: 2ibb_A
Length = 214
Score = 169 bits (430), Expect = 9e-48
Identities = 39/209 (18%), Positives = 63/209 (30%), Gaps = 16/209 (7%)
Query: 277 PGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTT------ 330
PP P +V+ ++ + L W P+ DG V V R +W +
Sbjct: 2 TYPP-TPPNVTRLSDESVMLRWMVPRNDGLPIVIFKVQYRMVGKRKNWQTTNDNIPYGKP 60
Query: 331 ------CHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPI--KAKSPYDKPSPPG 382
T V L Y F ++AV N + + D P
Sbjct: 61 KWNSELGKSFTASVTDLKPQHTYRFRILAVYSNNDNKESNTSAKFYLQPGAALDPMPVPE 120
Query: 383 IPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDA-WQRVNVAICAPSQINIPN 441
+ + + V L W D I GY+ S + + + I
Sbjct: 121 LLEIEEYSETAVVLHWSLASDADEHLITGYYAYYRPSSSAGEYFKATIEGAHARSFKIAP 180
Query: 442 LIEGRQYEFRVYAQNEAGLSLPSSASNSV 470
L YEF++ + + A S S+
Sbjct: 181 LETATMYEFKLQSFSAASASEFSALKQGR 209
Score = 169 bits (430), Expect = 9e-48
Identities = 39/209 (18%), Positives = 63/209 (30%), Gaps = 16/209 (7%)
Query: 1884 PGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTT------ 1937
PP P +V+ ++ + L W P+ DG V V R +W +
Sbjct: 2 TYPP-TPPNVTRLSDESVMLRWMVPRNDGLPIVIFKVQYRMVGKRKNWQTTNDNIPYGKP 60
Query: 1938 ------CHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPI--KAKSPYDKPSPPG 1989
T V L Y F ++AV N + + D P
Sbjct: 61 KWNSELGKSFTASVTDLKPQHTYRFRILAVYSNNDNKESNTSAKFYLQPGAALDPMPVPE 120
Query: 1990 IPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDA-WQRVNVAICAPSQINIPN 2048
+ + + V L W D I GY+ S + + + I
Sbjct: 121 LLEIEEYSETAVVLHWSLASDADEHLITGYYAYYRPSSSAGEYFKATIEGAHARSFKIAP 180
Query: 2049 LIEGRQYEFRVYAQNEAGLSLPSSASNSV 2077
L YEF++ + + A S S+
Sbjct: 181 LETATMYEFKLQSFSAASASEFSALKQGR 209
Score = 164 bits (417), Expect = 6e-46
Identities = 40/240 (16%), Positives = 74/240 (30%), Gaps = 47/240 (19%)
Query: 902 PHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTKVSSYV------ 955
+PP + + +S+ L W PR++G + V + W + +
Sbjct: 2 TYPPTPPNVTRLSDESVMLRWMVPRNDGLPIVIFKVQYRMVGKRKNWQTTNDNIPYGKPK 61
Query: 956 ------TTPFVRVRNLAIGSTYEFRVMAENQYGLSKPALTIDPI--KAKHPFDVPGAPGA 1007
+ V +L TY FR++A +K + T + D P
Sbjct: 62 WNSELGKSFTASVTDLKPQHTYRFRILAVYSNNDNKESNTSAKFYLQPGAALDPMPVPEL 121
Query: 1008 PKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLI-SDDKWIKASMAHIPDTSLKYVLW 1066
+ + +E ++ L WS I Y R S ++ KA++ S K
Sbjct: 122 LEIEEYSETAVVLHWSLASDADEHLITGYYAYYRPSSSAGEYFKATIEGAHARSFK---- 177
Query: 1067 VSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPWSSSSDII 1126
+ L YEF++ + +AA +S+
Sbjct: 178 ----------------------------IAPLETATMYEFKLQSFSAASASEFSALKQGR 209
Score = 133 bits (335), Expect = 6e-35
Identities = 29/177 (16%), Positives = 49/177 (27%), Gaps = 16/177 (9%)
Query: 1231 PSPPQGPLDVSDITPESCSLSWKPPLDDGGSPITNYVVEKYESATGFWSKLSSFVRSPA- 1289
PP P +V+ ++ ES L W P +DG + V + W + +
Sbjct: 2 TYPP-TPPNVTRLSDESVMLRWMVPRNDGLPIVIFKVQYRMVGKRKNWQTTNDNIPYGKP 60
Query: 1290 -----------YDVFGLETNRQYRFRVRAENQYGVSEPLELDNSIT--AKFPFTVPDPPG 1336
V L+ YRFR+ A ++ P
Sbjct: 61 KWNSELGKSFTASVTDLKPQHTYRFRILAVYSNNDNKESNTSAKFYLQPGAALDPMPVPE 120
Query: 1337 QPQIVDWDTNNATLMWDRPRTDGGSKIQGYKMLLKTPTGELPTTIWSKIRPTSSTVY 1393
+I ++ L W I GY P+ + I + +
Sbjct: 121 LLEIEEYSETAVVLHWSLASDADEHLITGYY-AYYRPSSSAGEYFKATIEGAHARSF 176
Score = 101 bits (254), Expect = 4e-24
Identities = 29/166 (17%), Positives = 52/166 (31%), Gaps = 11/166 (6%)
Query: 609 TWYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAPYRVVAENDLGM-----DSAIVK 663
W N+ I G + ++ D T +R++A SA
Sbjct: 47 NWQTTNDNIPYGKPKWNSELGKSFTASVTDLKPQHTYRFRILAVYSNNDNKESNTSAKFY 106
Query: 664 IQISDRPDP---PQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHP-MSSWIR- 718
+Q DP P+ +E+ ++ L W IT Y R + +
Sbjct: 107 LQPGAALDPMPVPELLEIEEYSETAVVLHWSLASDADEHLITGYYAYYRPSSSAGEYFKA 166
Query: 719 -VGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTK 763
+ + I L YEF++ + + S+ S T +
Sbjct: 167 TIEGAHARSFKIAPLETATMYEFKLQSFSAASASEFSALKQGRTQR 212
Score = 94.5 bits (235), Expect = 1e-21
Identities = 25/110 (22%), Positives = 39/110 (35%), Gaps = 15/110 (13%)
Query: 670 PDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREH-PMSSWIRVGNT------ 722
PP P V + +S+ L W P + G I + V+ R +W +
Sbjct: 2 TYPPTPPNVTRLSDESVMLRWMVPR-NDGLPIVIFKVQYRMVGKRKNWQTTNDNIPYGKP 60
Query: 723 -------RFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKDT 765
+ T ++T L P H Y FR+ A + S TS +
Sbjct: 61 KWNSELGKSFTASVTDLKPQHTYRFRILAVYSNNDNKESNTSAKFYLQPG 110
Score = 91.8 bits (228), Expect = 1e-20
Identities = 26/116 (22%), Positives = 39/116 (33%), Gaps = 13/116 (11%)
Query: 378 PSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDA-WQRVNVAICAPSQ 436
PP P VT++ + V L W P +DG I + + VG WQ N I
Sbjct: 2 TYPPTPPNVTRLSDESVMLRWMVPRNDGLP-IVIFKVQYRMVGKRKNWQTTNDNIPYGKP 60
Query: 437 IN-----------IPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAP 481
+ +L Y FR+ A + S+ S ++ A
Sbjct: 61 KWNSELGKSFTASVTDLKPQHTYRFRILAVYSNNDNKESNTSAKFYLQPGAALDPM 116
Score = 91.8 bits (228), Expect = 1e-20
Identities = 26/116 (22%), Positives = 39/116 (33%), Gaps = 13/116 (11%)
Query: 1985 PSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDA-WQRVNVAICAPSQ 2043
PP P VT++ + V L W P +DG I + + VG WQ N I
Sbjct: 2 TYPPTPPNVTRLSDESVMLRWMVPRNDGLP-IVIFKVQYRMVGKRKNWQTTNDNIPYGKP 60
Query: 2044 IN-----------IPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAP 2088
+ +L Y FR+ A + S+ S ++ A
Sbjct: 61 KWNSELGKSFTASVTDLKPQHTYRFRILAVYSNNDNKESNTSAKFYLQPGAALDPM 116
Score = 87.9 bits (218), Expect = 2e-19
Identities = 34/220 (15%), Positives = 66/220 (30%), Gaps = 33/220 (15%)
Query: 1130 APPCAPKITSDLSIRDMTVLAGEEFTITVPFSG------------RPKPTPIWTVNGDEV 1177
PP P +T LS + + VP + W D +
Sbjct: 3 YPPTPPNVT-RLSDESVML------RWMVPRNDGLPIVIFKVQYRMVGKRKNWQTTNDNI 55
Query: 1178 SPDGRIKFETSENQTIYRNKSAKRATDSGSYTIQL--VNTVG----SDSASCKVYVVDKP 1231
K +Y ++ V + S++++
Sbjct: 56 PYGKPKWNSELGKSFTASVTDLKPQH---TYRFRILAVYSNNDNKESNTSAKFYLQPGAA 112
Query: 1232 SPPQGP---LDVSDITPESCSLSWKPPLDDGGSPITNYVVEKYESAT-GFWSKLS-SFVR 1286
P L++ + + + L W D IT Y S++ G + K +
Sbjct: 113 LDPMPVPELLEIEEYSETAVVLHWSLASDADEHLITGYYAYYRPSSSAGEYFKATIEGAH 172
Query: 1287 SPAYDVFGLETNRQYRFRVRAENQYGVSEPLELDNSITAK 1326
+ ++ + LET Y F++++ + SE L T +
Sbjct: 173 ARSFKIAPLETATMYEFKLQSFSAASASEFSALKQGRTQR 212
Score = 87.2 bits (216), Expect = 5e-19
Identities = 31/152 (20%), Positives = 48/152 (31%), Gaps = 31/152 (20%)
Query: 1002 PGAPGAPKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLI-SDDKWIKASMAHIPDTS 1060
P P +++S+ L W PR + G PI + V+ R++ W +
Sbjct: 2 TYPPTPPNVTRLSDESVMLRWMVPR-NDGLPIVIFKVQYRMVGKRKNWQTTNDNIPYGKP 60
Query: 1061 LKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPWS 1120
SE G + VT L H Y FR+ AV + S
Sbjct: 61 -----------KWNSELGKSFTA----------SVTDLKPQHTYRFRILAVYSNNDNKES 99
Query: 1121 SSSDIIMC-----CAPPCAPKITSDLSIRDMT 1147
++S P P L I + +
Sbjct: 100 NTSAKFYLQPGAALDPMPVP---ELLEIEEYS 128
Score = 84.9 bits (210), Expect = 2e-18
Identities = 18/111 (16%), Positives = 32/111 (28%), Gaps = 4/111 (3%)
Query: 266 SGTFTINITGLPGPPIGP--LDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDI-SMP 322
S F + P P L++ E ++ LHW+ +T Y R S
Sbjct: 102 SAKFYLQPGAALDPMPVPELLEIEEYSETAVVLHWSLASDADEHLITGYYAYYRPSSSAG 161
Query: 323 HWI-CISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAK 372
+ H +F + L Y F + + + +
Sbjct: 162 EYFKATIEGAHARSFKIAPLETATMYEFKLQSFSAASASEFSALKQGRTQR 212
Score = 84.9 bits (210), Expect = 2e-18
Identities = 18/111 (16%), Positives = 32/111 (28%), Gaps = 4/111 (3%)
Query: 1873 SGTFTINITGLPGPPIGP--LDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDI-SMP 1929
S F + P P L++ E ++ LHW+ +T Y R S
Sbjct: 102 SAKFYLQPGAALDPMPVPELLEIEEYSETAVVLHWSLASDADEHLITGYYAYYRPSSSAG 161
Query: 1930 HWI-CISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAK 1979
+ H +F + L Y F + + + +
Sbjct: 162 EYFKATIEGAHARSFKIAPLETATMYEFKLQSFSAASASEFSALKQGRTQR 212
Score = 82.5 bits (204), Expect = 1e-17
Identities = 18/98 (18%), Positives = 38/98 (38%), Gaps = 4/98 (4%)
Query: 902 PHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTV-WTK--VSSYVTTP 958
PE L +E++ ++ L+W+ D IT Y + +S + K +
Sbjct: 116 MPVPELLEIEEYSETAVVLHWSLASDADEHLITGYYAYYRPSSSAGEYFKATIEGAHARS 175
Query: 959 FVRVRNLAIGSTYEFRVMAENQYGLSKPALTIDPIKAK 996
F + L + YEF++ + + S+ + +
Sbjct: 176 FK-IAPLETATMYEFKLQSFSAASASEFSALKQGRTQR 212
Score = 72.9 bits (179), Expect = 3e-14
Identities = 23/132 (17%), Positives = 43/132 (32%), Gaps = 36/132 (27%)
Query: 1559 VDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLI-SDDKWIKASMAHIPDTSLKYVLWVSE 1617
+++S+ L W PR + G PI + V+ R++ W +
Sbjct: 11 TRLSDESVMLRWMVPR-NDGLPIVIFKVQYRMVGKRKNWQTTN----------------- 52
Query: 1618 GKSIGSERGSTAQFLEREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGK 1677
+ K N + SV +L + Y FRI+AV +
Sbjct: 53 -----------------DNIPYGKPKWNSELGKSFTASVTDLKPQHTYRFRILAVYSNND 95
Query: 1678 SEPSICTTPVKI 1689
++ S + +
Sbjct: 96 NKESNTSAKFYL 107
Score = 72.9 bits (179), Expect = 3e-14
Identities = 19/131 (14%), Positives = 30/131 (22%), Gaps = 44/131 (33%)
Query: 1557 KGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVS 1616
+ + +E ++ L WS I Y R S
Sbjct: 123 EIEEYSETAVVLHWSLASDADEHLITGYYAYYRPSSSAGE-------------------- 162
Query: 1617 EGKSIGSERGSTAQFLEREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIG 1676
+ K SF + L YEF++ + +A
Sbjct: 163 ------------------------YFKATIEGAHARSFKIAPLETATMYEFKLQSFSAAS 198
Query: 1677 KSEPSICTTPV 1687
SE S
Sbjct: 199 ASEFSALKQGR 209
Score = 62.1 bits (151), Expect = 2e-10
Identities = 14/60 (23%), Positives = 20/60 (33%), Gaps = 1/60 (1%)
Query: 22 YIIERREVGGAI-WLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPSICTTPV 80
Y R A + K SF + L YEF++ + +A SE S
Sbjct: 150 YYAYYRPSSSAGEYFKATIEGAHARSFKIAPLETATMYEFKLQSFSAASASEFSALKQGR 209
Score = 57.9 bits (140), Expect = 5e-09
Identities = 16/73 (21%), Positives = 28/73 (38%), Gaps = 12/73 (16%)
Query: 22 YIIERREVG-GAIWLKCND-----------YNVLECSFSVLNLVEGNDYEFRIIAVNAIG 69
+ ++ R VG W ND + SV +L + Y FRI+AV +
Sbjct: 35 FKVQYRMVGKRKNWQTTNDNIPYGKPKWNSELGKSFTASVTDLKPQHTYRFRILAVYSNN 94
Query: 70 KSEPSICTTPVKI 82
++ S + +
Sbjct: 95 DNKESNTSAKFYL 107
>1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY
acidic protein fold, fibronectin type III fold, hormone-
growth factor complex; NMR {Homo sapiens}
Length = 680
Score = 180 bits (457), Expect = 6e-47
Identities = 74/541 (13%), Positives = 137/541 (25%), Gaps = 113/541 (20%)
Query: 902 PHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVE--------KKDYNSTVWTKVSS 953
P + L E L + W+ + E YVV+ + ++T W V+
Sbjct: 161 LKPRKELRFTELQSGQLEVKWSSKFNIS-IEPVIYVVQRRWNYGIHPSEDDATHWQTVAQ 219
Query: 954 YVTTPFVRVRNLAIGSTYEFRVMAENQYGLSKPALTIDPIKAKHPFDVPGAPGAPKGVDS 1013
T V++ ++ Y+FRV A N +G ++ P AP + +S
Sbjct: 220 -TTDERVQLTDIRPSRWYQFRVAAVNVHGTRGFTAPSKHFRSSKDPSAPPAPANLRLANS 278
Query: 1014 TED-----SISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVS 1068
T + ++++VW P P+ Y V + K L
Sbjct: 279 TVNSDGSVTVTIVWDLPEEPDI-PVHHYKVFWSWMVSSKS------------LVPTKKKR 325
Query: 1069 EGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPWSSSSDIIMC 1128
+ G + + L + +Y + A+ GQ S+ +
Sbjct: 326 RKTTDGFQNSVI--------------LEKLQPDCDYVVELQAITYWGQTRLKSAKVSLHF 371
Query: 1129 CAPPCAPKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEV------SPDGR 1182
+ + R + F P P + +V + D
Sbjct: 372 TSTHATNNKEQLVKTRKGGIQTQLPFQRRRPTRPLEVGAPFYQDGQLQVKVYWKKTEDPT 431
Query: 1183 IKF-------------ETSENQTIYRNKSAKRATDSG-----SYTIQL--VNTVGSDSAS 1222
+ T+ ++ Y + + + A
Sbjct: 432 VNRYHVRWFPEACAHNRTTGSEASSGMTHENYIILQDLSFSCKYKVTVQPIRPKSHSKAE 491
Query: 1223 ----------------------CKVYVVDKPSPPQGPLDVS-----DITPESCSLSWKPP 1255
P ++S + SWK
Sbjct: 492 AVFFTTPPCSALKGKSHKPIGCLGEAGHVLSKVLAKPENLSASFIVQDVNITGHFSWKMA 551
Query: 1256 LDDGGSPITNYVVEKYESATGFW------SKLSSFVRSPA----YDVFGLETNRQYRFRV 1305
+ P+T + V E T S +S P+ V L + YR V
Sbjct: 552 KANLYQPMTGFQVTWAEVTTESRQNSLPNSIISQSQILPSDHYVLTVPNLRPSTLYRLEV 611
Query: 1306 RAENQYGVSEPLELDNSITAKFPFTVPDPPGQPQIVDWDTNNATLMWDRPRTDGGSKIQG 1365
+ G T + P P + + + + G I
Sbjct: 612 QVLTPGGEGPA----TIKTFRTPELPPSSAHRSHL----KHRHPHHYKPSPERYGKPIPN 663
Query: 1366 Y 1366
Sbjct: 664 P 664
Score = 177 bits (450), Expect = 4e-46
Identities = 72/547 (13%), Positives = 144/547 (26%), Gaps = 77/547 (14%)
Query: 248 KEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGL 307
E +G SN G G+P P L +E+ + W+ ++ +
Sbjct: 132 NECSGVKKCC-SNGCGHTCQVPKTLYKGVPLKPRKELRFTELQSGQLEVKWSSK-FNISI 189
Query: 308 KVTHYVVERRDISMPH--------WICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGM 359
+ YVV+RR H W ++ T D + + + Y F V AVN +G
Sbjct: 190 EPVIYVVQRRWNYGIHPSEDDATHWQTVAQT-TDERVQLTDIRPSRWYQFRVAAVNVHGT 248
Query: 360 GPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDF-----VNLSWDKPLDDGGSRIQGYWI 414
++ P P + + V + WD P + + Y +
Sbjct: 249 RGFTAPSKHFRSSKDPSAPPAPANLRLANSTVNSDGSVTVTIVWDLPEEPDI-PVHHYKV 307
Query: 415 ------DKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASN 468
+ +R + + + L Y + A G + SA
Sbjct: 308 FWSWMVSSKSLVPTKKKRRKTTDGFQNSVILEKLQPDCDYVVELQAITYWGQTRLKSAKV 367
Query: 469 SVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHH 528
S+ A E +V R Q + + G ++ +
Sbjct: 368 SLHFTSTHATNNKEQLVKTRKGGIQTQLPFQRRRPTRPLEVGAPFYQDGQLQVKVYWKKT 427
Query: 529 IFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPRFRDTAYF 588
+ Y + A T II+ F+ +
Sbjct: 428 EDPTVNRYHVRWFPEACAHNRTTGSEAS----SGMTHENYIILQDLSFSCKYKVTVQPIR 483
Query: 589 DKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAPYR 648
K + + FT P ++ H +
Sbjct: 484 PKSHSKAEAVFFTTPP---------CSALKGKSHKPIGCL-------------------- 514
Query: 649 VVAENDLGMDSAIVKIQISDRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEK 708
++ V ++ +P+ + + + W+ + +T + V
Sbjct: 515 --------GEAGHVLSKVLAKPENLSASFIVQDVNITGHFSWKMAKANLYQPMTGFQVTW 566
Query: 709 RE-----------HPMSSWIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTS 757
E + + S ++ + + + L P Y V G + +
Sbjct: 567 AEVTTESRQNSLPNSIISQSQILPSDHYVLTVPNLRPSTLYRLEVQVLTPGGEGPATIKT 626
Query: 758 DLITTKD 764
T +
Sbjct: 627 --FRTPE 631
Score = 143 bits (362), Expect = 4e-35
Identities = 46/263 (17%), Positives = 80/263 (30%), Gaps = 23/263 (8%)
Query: 1855 KEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGL 1914
E +G SN G G+P P L +E+ + W+ ++ +
Sbjct: 132 NECSGVKKCC-SNGCGHTCQVPKTLYKGVPLKPRKELRFTELQSGQLEVKWSSK-FNISI 189
Query: 1915 KVTHYVVERRDISMPH--------WICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGM 1966
+ YVV+RR H W ++ T D + + + Y F V AVN +G
Sbjct: 190 EPVIYVVQRRWNYGIHPSEDDATHWQTVAQT-TDERVQLTDIRPSRWYQFRVAAVNVHGT 248
Query: 1967 GPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDF-----VNLSWDKPLDDGGSRIQGYWI 2021
++ P P + + V + WD P + + Y +
Sbjct: 249 RGFTAPSKHFRSSKDPSAPPAPANLRLANSTVNSDGSVTVTIVWDLPEEPDI-PVHHYKV 307
Query: 2022 ------DKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASN 2075
+ +R + + + L Y + A G + SA
Sbjct: 308 FWSWMVSSKSLVPTKKKRRKTTDGFQNSVILEKLQPDCDYVVELQAITYWGQTRLKSAKV 367
Query: 2076 SVQIKDPMAAKAPEIIVPLRNAN 2098
S+ A E +V R
Sbjct: 368 SLHFTSTHATNNKEQLVKTRKGG 390
Score = 135 bits (341), Expect = 2e-32
Identities = 64/544 (11%), Positives = 136/544 (25%), Gaps = 108/544 (19%)
Query: 1204 DSGSYTIQLVNTVGSDSASCKVYVVDKPSPPQGPLDVSDITPESCSLSWKPPLDDGGSPI 1263
SG N G K P P+ L +++ + W +
Sbjct: 134 CSGVKKCC-SNGCGHTCQVPKTLYKGVPLKPRKELRFTELQSGQLEVKWSSK-FNISIEP 191
Query: 1264 TNYVVE--------KYESATGFWSKLSSFVRSPAYDVFGLETNRQYRFRVRAENQYGVSE 1315
YVV+ E W ++ + + +R Y+FRV A N +G
Sbjct: 192 VIYVVQRRWNYGIHPSEDDATHWQTVAQ-TTDERVQLTDIRPSRWYQFRVAAVNVHGTRG 250
Query: 1316 PLELDNSITAKFPFTVPDPPGQPQIVDWDTNNA-----TLMWDRPRTDGGSKIQGYK--M 1368
+ + P P ++ + N+ T++WD P + + YK
Sbjct: 251 FTAPSKHFRSSKDPSAPPAPANLRLANSTVNSDGSVTVTIVWDLPE-EPDIPVHHYKVFW 309
Query: 1369 LLKTPTGELPTTIWSKIRPTSS-------------TVYC--------------------- 1394
+ L T + + T Y
Sbjct: 310 SWMVSSKSLVPTKKKRRKTTDGFQNSVILEKLQPDCDYVVELQAITYWGQTRLKSAKVSL 369
Query: 1395 -KDTTMNSSNSEPGKQSGPVIVEEQPNKPVMDLSGVRDITVKAGEDFSIHVPFMAFPQPA 1453
+T ++N E ++ ++ Q + ++ +D + V
Sbjct: 370 HFTSTHATNNKEQLVKTRKGGIQTQLPFQRRRPTRPLEVGAPFYQDGQLQVKVYWKKTED 429
Query: 1454 A-------FWFANDSIIDDSDTRVHKQLTMNSASLVVKNSQRSDGGQYRLQLK--NPAGF 1504
WF + + + +++++ +Y++ ++ P
Sbjct: 430 PTVNRYHVRWFPEACAHNRTTGSEASSGMTHENYIILQDLS--FSCKYKVTVQPIRPKSH 487
Query: 1505 DTATLHSRLRTLPDSVNPRCHLPSSTSKERPKFPTHPNHQPWLKWARASLTSKGVDSTED 1564
A ++ + H P E + +P S V
Sbjct: 488 SKAEAVFFTTPPCSALKGKSHKPIGCLGEAGHVLSKVLAKP-----ENLSASFIVQDVNI 542
Query: 1565 SISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEGKSIGSE 1624
+ W + + P+ + V ++ + + I
Sbjct: 543 TGHFSWKMAKANLYQPMTGFQVTWAEVTTESRQNSLPNSIIS------------------ 584
Query: 1625 RGSTAQFLEREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPSI-- 1682
+ +V NL Y + + G+ +I
Sbjct: 585 ------------------QSQILPSDHYVLTVPNLRPSTLYRLEVQVLTPGGEGPATIKT 626
Query: 1683 CTTP 1686
TP
Sbjct: 627 FRTP 630
Score = 106 bits (266), Expect = 2e-23
Identities = 47/424 (11%), Positives = 106/424 (25%), Gaps = 55/424 (12%)
Query: 897 EVLDRPHPPENLH-----ADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTKV 951
+ P P NL + ++T+ W P + + +Y V S+
Sbjct: 262 KDPSAPPAPANLRLANSTVNSDGSVTVTIVWDLPEEPDI-PVHHYKVFWSWMVSSKSLVP 320
Query: 952 SSYV-------TTPFVRVRNLAIGSTYEFRVMAENQYGLSKPALTIDPIKAKHPFDVPGA 1004
+ V + L Y + A +G ++ +
Sbjct: 321 TKKKRRKTTDGFQNSVILEKLQPDCDYVVELQAITYWGQTRLKSAKVSLHFTSTHATNNK 380
Query: 1005 PGAPKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDD-KWIKASMAHIPDTSLKY 1063
K L + + R + + + W K + +++
Sbjct: 381 EQLVK-TRKGGIQTQLPFQRRRPTRPLEVGAPFYQDGQLQVKVYWKKTEDPTVNRYHVRW 439
Query: 1064 VLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPWSSSS 1123
S+ E ++ + L + +Y+ V + +
Sbjct: 440 FPEACAHNRTTGSEASSGMTHENYII-----LQDLSFSCKYKVTVQPIRPKSHSKAEAVF 494
Query: 1124 DIIMCCAPPCAPKITSDLSIRDMT---------------VLAGEEFTITVPFSGRPKPTP 1168
C+ + + ++ IT FS +
Sbjct: 495 FTTPPCSALKGKSHKPIGCLGEAGHVLSKVLAKPENLSASFIVQDVNITGHFSWKMAKAN 554
Query: 1169 I----------WTVNGDEVSPDGRIKFETSENQTIYRNKSAKRATD---SGSYTIQL--V 1213
+ W E + S++Q + + + S Y +++ +
Sbjct: 555 LYQPMTGFQVTWAEVTTESRQNSLPNSIISQSQILPSDHYVLTVPNLRPSTLYRLEVQVL 614
Query: 1214 NTVG-SDSASCKVYVVDKPSPPQGPLDVSDITPESCSLSWKPPLDDGGSPITNYVVEKYE 1272
G + + P + P +KP + G PI N ++
Sbjct: 615 TPGGEGPATIKTFRTPELPPSSAHRSHLKHRHPHH----YKPSPERYGKPIPNPLLGLDS 670
Query: 1273 SATG 1276
+ TG
Sbjct: 671 TRTG 674
Score = 106 bits (266), Expect = 3e-23
Identities = 58/478 (12%), Positives = 120/478 (25%), Gaps = 103/478 (21%)
Query: 992 PIKAKHPFDVPGAPGAPKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKA 1051
K + + + + + W + + Y+V++R +
Sbjct: 151 VPKTLYKGVPLKPRKELRFTELQSGQLEVKW-SSKFNISIEPVIYVVQRRWNYGIHPSED 209
Query: 1052 SMAHIPDTSLKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAV 1111
H W + + + + ++T + + Y+FRV AV
Sbjct: 210 DATH----------WQTV------AQTTDERV----------QLTDIRPSRWYQFRVAAV 243
Query: 1112 NAAGQGPWSSSSDIIMCCAPPCAPKITSDLSIRDMTVLAGEEFTITVPFSGRPKP-TPI- 1169
N G +++ S P AP ++L + + TV + T+T+ + +P P+
Sbjct: 244 NVHGTRGFTAPSKHFRSSKDPSAPPAPANLRLANSTVNSDGSVTVTIVWDLPEEPDIPVH 303
Query: 1170 -----WTVNGDEVSPDGRIKFE---TSENQTIYRNKSAKRATDSGSYTIQL--VNTVGS- 1218
W+ S K T Q + + Y ++L + G
Sbjct: 304 HYKVFWSWMVSSKSLVPTKKKRRKTTDGFQNSVILEKLQPDC---DYVVELQAITYWGQT 360
Query: 1219 --DSASCKVYVVDKPSPPQGPLDVS----------------------------DITPESC 1248
SA ++ + V
Sbjct: 361 RLKSAKVSLHFTSTHATNNKEQLVKTRKGGIQTQLPFQRRRPTRPLEVGAPFYQDGQLQV 420
Query: 1249 SLSWKPPLDDGGSPITNYVVEKYESA-----TGFWSKLSSFVRSPAYDVFGLETNRQYRF 1303
+ WK + Y V + A T S + L + +Y+
Sbjct: 421 KVYWKKT---EDPTVNRYHVRWFPEACAHNRTTGSEASSGMTHENYIILQDLSFSCKYKV 477
Query: 1304 RVRAENQYGVS--------------------EPLELDNSITAKFPFTVPDPPGQPQIVDW 1343
V+ S +P+ + P
Sbjct: 478 TVQPIRPKSHSKAEAVFFTTPPCSALKGKSHKPIGCLGEAGHVLSKVLAKPENLSASFIV 537
Query: 1344 DTNN--ATLMWDRPRTDGGSKIQGYKMLLKTPTGELPTTIWSKIRPTSSTVYCKDTTM 1399
N W + + + G+++ T E + S + D +
Sbjct: 538 QDVNITGHFSWKMAKANLYQPMTGFQVTWAEVTTESRQNSLPNSIISQSQILPSDHYV 595
Score = 96.6 bits (239), Expect = 3e-20
Identities = 60/505 (11%), Positives = 116/505 (22%), Gaps = 114/505 (22%)
Query: 1530 TSKERPKFPTHPNHQPWLKWARASLTSKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKR 1589
S + P P P L+ A +++ S G ++++VW P P+ Y V
Sbjct: 259 RSSKDPSAPPAP---ANLRLANSTVNSDG----SVTVTIVWDLPEEPDI-PVHHYKVFWS 310
Query: 1590 LISDDKWIKASMAHIPDTSLKYVLWVSEGKSIGSERGSTAQFLEREVGGAIWLKCNDYNV 1649
+ K + + + +
Sbjct: 311 WMVSSKSLVPT---------------------------------------KKKRRKTTDG 331
Query: 1650 LECSFSVLNLVEGNDYEFRIIAVNAIGKSEPSICTTPVKICEFVGGEKPDFIVPLKDLVV 1709
+ S + L DY + A+ G++ + + +V + +
Sbjct: 332 FQNSVILEKLQPDCDYVVELQAITYWGQTRLKSAKVSLHFTSTHATNNKEQLVKTRKGGI 391
Query: 1710 PLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYT 1769
+ R L G + +V ++++ + D Y
Sbjct: 392 QT--------QLPFQRRRPTRPLEVGAPFYQDGQLQV-------KVYWKKTEDPTVNRYH 436
Query: 1770 CEAYNSVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGR 1829
+ P A ++ + + +
Sbjct: 437 -----------------------VRWFPEACAHNRTTGSEASSGMTHENYIILQDLSFSC 473
Query: 1830 VVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPIG 1889
++K TV K L S G L
Sbjct: 474 ------KYKVTVQPIRPKSHSKAEAVFFTTPPCSALKGKSHKPIGCLGEAGHVLSKVLAK 527
Query: 1890 PLDVS-----EITKHTCTLHWNPPKYDGGLKVTHYVVE--------RRDISMPHWICIST 1936
P ++S + T W K + +T + V R++ I S
Sbjct: 528 PENLSASFIVQDVNITGHFSWKMAKANLYQPMTGFQVTWAEVTTESRQNSLPNSIISQSQ 587
Query: 1937 T--CHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVT 1994
V L Y V + G GP ++P PS +
Sbjct: 588 ILPSDHYVLTVPNLRPSTLYRLEVQVLTPGGEGPATI----KTFRTPELPPSSAHRSHLK 643
Query: 1995 QVGGDFVNLSWDKPLDDGGSRIQGY 2019
+ + G I
Sbjct: 644 HRHPH----HYKPSPERYGKPIPNP 664
Score = 95.4 bits (236), Expect = 9e-20
Identities = 21/131 (16%), Positives = 42/131 (32%), Gaps = 9/131 (6%)
Query: 643 DTAPYRVVAENDLGMDSAIVKIQISDRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNIT 702
+ + + + P + ++ L + W + +
Sbjct: 134 CSGVKKCCSNGCGHTCQVPKTLYKGVPLKPRKELRFTELQSGQLEVKWSSKF-NISIEPV 192
Query: 703 NYIVEKR--------EHPMSSWIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPS 754
Y+V++R E + W V T + +T + P Y+FRV A NV+G +
Sbjct: 193 IYVVQRRWNYGIHPSEDDATHWQTVAQTTDERVQLTDIRPSRWYQFRVAAVNVHGTRGFT 252
Query: 755 TTSDLITTKDT 765
S +
Sbjct: 253 APSKHFRSSKD 263
Score = 88.5 bits (218), Expect = 1e-17
Identities = 46/412 (11%), Positives = 91/412 (22%), Gaps = 73/412 (17%)
Query: 22 YIIERREVGG------AIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPSI 75
Y + + + + + S + L DY + A+ G++
Sbjct: 305 YKVFWSWMVSSKSLVPTKKKRRKTTDGFQNSVILEKLQPDCDYVVELQAITYWGQTRLKS 364
Query: 76 CTTPVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGA 135
+ + +V + + + R L G
Sbjct: 365 AKVSLHFTSTHATNNKEQLVKTRKGGIQT--------QLPFQRRRPTRPLEVGAPFYQDG 416
Query: 136 RYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMPNALYI 195
+ +V ++++ + D Y + P A
Sbjct: 417 QLQV-------KVYWKKTEDPTVNRYH-----------------------VRWFPEACAH 446
Query: 196 PEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYT 255
++ + + + ++K TV K
Sbjct: 447 NRTTGSEASSGMTHENYIILQDLSFSC------KYKVTVQPIRPKSHSKAEAVFFTTPPC 500
Query: 256 VNLSNSSGSVSGTFTINITGLPGPPIGPLDVS-----EITKHTCTLHWNPPKYDGGLKVT 310
L S G L P ++S + T W K + +T
Sbjct: 501 SALKGKSHKPIGCLGEAGHVLSKVLAKPENLSASFIVQDVNITGHFSWKMAKANLYQPMT 560
Query: 311 HYVVE--------RRDISMPHWICISTT--CHDTTFIVQGLTEGQEYLFHVMAVNENGMG 360
+ V R++ I S V L Y V + G G
Sbjct: 561 GFQVTWAEVTTESRQNSLPNSIISQSQILPSDHYVLTVPNLRPSTLYRLEVQVLTPGGEG 620
Query: 361 PPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGY 412
P ++P PS + + + G I
Sbjct: 621 PATI----KTFRTPELPPSSAHRSHLKHRHPH----HYKPSPERYGKPIPNP 664
Score = 86.6 bits (213), Expect = 5e-17
Identities = 40/258 (15%), Positives = 70/258 (27%), Gaps = 45/258 (17%)
Query: 267 GTFTINITGLPGPPIGPLDVSEITKH----TCTLHWNPPKYDGGLKVTHYVVERR----- 317
G + P PL+V ++W + V Y V
Sbjct: 389 GGIQTQLPFQRRRPTRPLEVGAPFYQDGQLQVKVYWKKTEDPT---VNRYHVRWFPEACA 445
Query: 318 -DISMPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGP--------PLEGINP 368
+ + T H+ I+Q L+ +Y V + P
Sbjct: 446 HNRTTGSEASSGMT-HENYIILQDLSFSCKYKVTVQPIRPKSHSKAEAVFFTTPPCSALK 504
Query: 369 IKAKSPYD--------------KPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWI 414
K+ P KP + Q + SW + + G+ +
Sbjct: 505 GKSHKPIGCLGEAGHVLSKVLAKPENLSASFIVQDVNITGHFSWKMAKANLYQPMTGFQV 564
Query: 415 DKHEVGSDAWQ-RVNVAICAPSQIN--------IPNLIEGRQYEFRVYAQNEAGLSLPSS 465
EV +++ Q + +I + SQI +PNL Y V G +
Sbjct: 565 TWAEVTTESRQNSLPNSIISQSQILPSDHYVLTVPNLRPSTLYRLEVQVLTPGGEGPATI 624
Query: 466 ASNSVQIKDPMAAKAPEI 483
+ P +A +
Sbjct: 625 KTFRTPELPPSSAHRSHL 642
Score = 86.6 bits (213), Expect = 5e-17
Identities = 40/258 (15%), Positives = 70/258 (27%), Gaps = 45/258 (17%)
Query: 1874 GTFTINITGLPGPPIGPLDVSEITKH----TCTLHWNPPKYDGGLKVTHYVVERR----- 1924
G + P PL+V ++W + V Y V
Sbjct: 389 GGIQTQLPFQRRRPTRPLEVGAPFYQDGQLQVKVYWKKTEDPT---VNRYHVRWFPEACA 445
Query: 1925 -DISMPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGP--------PLEGINP 1975
+ + T H+ I+Q L+ +Y V + P
Sbjct: 446 HNRTTGSEASSGMT-HENYIILQDLSFSCKYKVTVQPIRPKSHSKAEAVFFTTPPCSALK 504
Query: 1976 IKAKSPYD--------------KPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWI 2021
K+ P KP + Q + SW + + G+ +
Sbjct: 505 GKSHKPIGCLGEAGHVLSKVLAKPENLSASFIVQDVNITGHFSWKMAKANLYQPMTGFQV 564
Query: 2022 DKHEVGSDAWQ-RVNVAICAPSQIN--------IPNLIEGRQYEFRVYAQNEAGLSLPSS 2072
EV +++ Q + +I + SQI +PNL Y V G +
Sbjct: 565 TWAEVTTESRQNSLPNSIISQSQILPSDHYVLTVPNLRPSTLYRLEVQVLTPGGEGPATI 624
Query: 2073 ASNSVQIKDPMAAKAPEI 2090
+ P +A +
Sbjct: 625 KTFRTPELPPSSAHRSHL 642
Score = 85.8 bits (211), Expect = 8e-17
Identities = 43/383 (11%), Positives = 98/383 (25%), Gaps = 64/383 (16%)
Query: 157 DNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVS 216
+G C + + G P + L E + ++++ + +S
Sbjct: 134 CSGVKKCCSNGCGHTCQVPKTLYKGVPL---KPRKELRFTELQSGQLEVKW--SSKFNIS 188
Query: 217 LTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVN------------------- 257
+ VVQ + +D + + + + +
Sbjct: 189 IEPVIYVVQRRWNYGIHPSEDDATHW-QTVAQTTDERVQLTDIRPSRWYQFRVAAVNVHG 247
Query: 258 LSNSSGSVSGTFTINITGLPGPP----IGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYV 313
+ + P P + V+ T T+ W+ P+ V HY
Sbjct: 248 TRGFTAPSKHFRSSKDPSAPPAPANLRLANSTVNSDGSVTVTIVWDLPEEPDI-PVHHYK 306
Query: 314 VERR-------DISMPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGI 366
V + +T + I++ L +Y+ + A+ G
Sbjct: 307 VFWSWMVSSKSLVPTKKKRRKTTDGFQNSVILEKLQPDCDYVVELQAITYWGQTRLKSAK 366
Query: 367 NPIKAKSPYDKPSPPGIPVVT--------------------------QVGGDFVNLSWDK 400
+ S + + + Q G V + W K
Sbjct: 367 VSLHFTSTHATNNKEQLVKTRKGGIQTQLPFQRRRPTRPLEVGAPFYQDGQLQVKVYWKK 426
Query: 401 PLDDGGSRIQGYWIDKHEVGSD-AWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAG 459
D +R W + + + + + I + +L +Y+ V
Sbjct: 427 TEDPTVNRYHVRWFPEACAHNRTTGSEASSGMTHENYIILQDLSFSCKYKVTVQPIRPKS 486
Query: 460 LSLPSSASNSVQIKDPMAAKAPE 482
S + + + K+ +
Sbjct: 487 HSKAEAVFFTTPPCSALKGKSHK 509
Score = 85.8 bits (211), Expect = 8e-17
Identities = 43/383 (11%), Positives = 98/383 (25%), Gaps = 64/383 (16%)
Query: 1764 DNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVS 1823
+G C + + G P + L E + ++++ + +S
Sbjct: 134 CSGVKKCCSNGCGHTCQVPKTLYKGVPL---KPRKELRFTELQSGQLEVKW--SSKFNIS 188
Query: 1824 LTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVN------------------- 1864
+ VVQ + +D + + + + +
Sbjct: 189 IEPVIYVVQRRWNYGIHPSEDDATHW-QTVAQTTDERVQLTDIRPSRWYQFRVAAVNVHG 247
Query: 1865 LSNSSGSVSGTFTINITGLPGPP----IGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYV 1920
+ + P P + V+ T T+ W+ P+ V HY
Sbjct: 248 TRGFTAPSKHFRSSKDPSAPPAPANLRLANSTVNSDGSVTVTIVWDLPEEPDI-PVHHYK 306
Query: 1921 VERR-------DISMPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGI 1973
V + +T + I++ L +Y+ + A+ G
Sbjct: 307 VFWSWMVSSKSLVPTKKKRRKTTDGFQNSVILEKLQPDCDYVVELQAITYWGQTRLKSAK 366
Query: 1974 NPIKAKSPYDKPSPPGIPVVT--------------------------QVGGDFVNLSWDK 2007
+ S + + + Q G V + W K
Sbjct: 367 VSLHFTSTHATNNKEQLVKTRKGGIQTQLPFQRRRPTRPLEVGAPFYQDGQLQVKVYWKK 426
Query: 2008 PLDDGGSRIQGYWIDKHEVGSD-AWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAG 2066
D +R W + + + + + I + +L +Y+ V
Sbjct: 427 TEDPTVNRYHVRWFPEACAHNRTTGSEASSGMTHENYIILQDLSFSCKYKVTVQPIRPKS 486
Query: 2067 LSLPSSASNSVQIKDPMAAKAPE 2089
S + + + K+ +
Sbjct: 487 HSKAEAVFFTTPPCSALKGKSHK 509
Score = 84.6 bits (208), Expect = 2e-16
Identities = 59/474 (12%), Positives = 111/474 (23%), Gaps = 75/474 (15%)
Query: 368 PIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGS-------RIQGYWIDKHEVG 420
K P T++ + + W + R Y I E
Sbjct: 151 VPKTLYKGVPLKPRKELRFTELQSGQLEVKWSSKFNISIEPVIYVVQRRWNYGIHPSEDD 210
Query: 421 SDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKA 480
+ WQ V ++ + ++ R Y+FRV A N G ++ S + A
Sbjct: 211 ATHWQTVAQTT--DERVQLTDIRPSRWYQFRVAAVNVHGTRGFTAP--SKHFRSSKDPSA 266
Query: 481 PEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLII 540
P LR AN+ N + T I W P + +F ++ ++
Sbjct: 267 PPAPANLRLANSTVNSDGSVTVT--------IVWDLPEEPDIPVHHYKVF-----WSWMV 313
Query: 541 NSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPF 600
+S V + + + +L + A G+
Sbjct: 314 SSKSLVPTKKKRRKTTDGFQNSVILEKLQPDCDYVVEL------QAITYWGQT------- 360
Query: 601 TGYPKPKITWYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAPYRVVAENDLGMDSA 660
L + V
Sbjct: 361 -------------------------RLKSAKVSLHFTSTHATNNKEQLVKTRKGGIQTQL 395
Query: 661 IVKIQISDRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKR------EHPMS 714
+ + RP P +D G + + W+ + Y V
Sbjct: 396 PFQRRRPTRPLEVGAPFYQD-GQLQVKVYWKKT---EDPTVNRYHVRWFPEACAHNRTTG 451
Query: 715 SWIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKDTFKKQIKKRQ 774
S G T + + LS +Y+ V S K + K
Sbjct: 452 SEASSGMTHENYIILQDLSFSCKYKVTVQPIRPKSHSKAEAVFFTTPPCSALKGKSHKPI 511
Query: 775 YDFDETGKKIRGKADEKVSDYDQYVFDIYSKYVP---QPVDIKTSSVYDHYDIL 825
E G + + + ++ + + + +
Sbjct: 512 GCLGEAGHVLSKVLAKPENLSASFIVQDVNITGHFSWKMAKANLYQPMTGFQVT 565
Score = 35.3 bits (80), Expect = 0.29
Identities = 11/70 (15%), Positives = 20/70 (28%), Gaps = 11/70 (15%)
Query: 21 CYIIERREVGG---------AIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKS 71
+ + EV +I + +V NL Y + + G+
Sbjct: 561 GFQVTWAEVTTESRQNSLPNSIISQSQILPSDHYVLTVPNLRPSTLYRLEVQVLTPGGEG 620
Query: 72 EPSI--CTTP 79
+I TP
Sbjct: 621 PATIKTFRTP 630
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein;
1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Length = 284
Score = 168 bits (428), Expect = 2e-46
Identities = 51/219 (23%), Positives = 96/219 (43%), Gaps = 12/219 (5%)
Query: 449 EFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNA-NAIQNHNAQFQCTITGC 507
++ YA N AG S S + +++P P I L + Q+ + +++C I G
Sbjct: 75 QYTCYASNVAG---KDSCSAQLGVQEP-----PRFIKKLEPSRIVKQDEHTRYECKIGGS 126
Query: 508 PKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAE 567
P+ + W K EI S++ + L + ++ D+ +Y C A N G S+
Sbjct: 127 PEIKVLWYKDETEIQESSKFRMSFVESVAVLEMYNLSVEDSGDYTCEAHNAAGSASSSTS 186
Query: 568 LIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVET 627
L + P F P +T KG +V ++ G P +++W++D + SG + + +
Sbjct: 187 LKVKEPPVFRKKPHPVETL---KGADVHLECELQGTPPFQVSWHKDKRELRSGKKYKIMS 243
Query: 628 SERHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQI 666
+ I + + D Y+ A ND+G + + I +
Sbjct: 244 ENFLTSIHILNVDSADIGEYQCKASNDVGSYTCVGSITL 282
Score = 164 bits (418), Expect = 4e-45
Identities = 50/196 (25%), Positives = 84/196 (42%), Gaps = 5/196 (2%)
Query: 480 APEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLI 539
P + + + + F+C +TG I+W K +REI P + + +T TL
Sbjct: 5 PPFFDLKPVSVDLALGESGTFKCHVTGTAPIKITWAKDNREIRPGGNYKMTLVENTATLT 64
Query: 540 INSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIP 599
+ V DA +Y C A N G S A+L + P+F + + E+ +
Sbjct: 65 VLKVTKGDAGQYTCYASNVAGKDSCSAQLGVQEPPRFIKKL--EPSRIVKQDEHTRYECK 122
Query: 600 FTGYPKPKITWYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAPYRVVAENDLGMDS 659
G P+ K+ WY+D I+ F + E A+L + + S D+ Y A N G S
Sbjct: 123 IGGSPEIKVLWYKDETEIQESSKFRMSFVESVAVLEMYNLSVEDSGDYTCEAHNAAGSAS 182
Query: 660 AIVKIQISDRPDPPQF 675
+ +++ +PP F
Sbjct: 183 SSTSLKVK---EPPVF 195
Score = 154 bits (391), Expect = 2e-41
Identities = 56/218 (25%), Positives = 101/218 (46%), Gaps = 9/218 (4%)
Query: 59 EFRIIAVNAIGKSEPSICTTPVKICEFVGGEKPDFIVPLKDL-VVPLGKLLTLQCEATGT 117
++ A N GK C+ + + E P FI L+ +V + +C+ G+
Sbjct: 75 QYTCYASNVAGKDS---CSAQLGV-----QEPPRFIKKLEPSRIVKQDEHTRYECKIGGS 126
Query: 118 PVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSR 177
P K W ++ EI +++R+ V L ++ D+GDYTCEA+N+ G A +S+
Sbjct: 127 PEIKVLWYKDETEIQESSKFRMSFVESVAVLEMYNLSVEDSGDYTCEAHNAAGSASSSTS 186
Query: 178 VKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDD 237
+K+ PP + P+ + +G + ++ G P +VS K+ R ++S ++K +
Sbjct: 187 LKVKEPPVFRKKPHPVETLKGADVHLECELQGTPPFQVSWHKDKRELRSGKKYKIMSENF 246
Query: 238 YIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITG 275
I I + D G+Y SN GS + +I +
Sbjct: 247 LTSIHILNVDSADIGEYQCKASNDVGSYTCVGSITLKA 284
Score = 154 bits (391), Expect = 2e-41
Identities = 56/218 (25%), Positives = 101/218 (46%), Gaps = 9/218 (4%)
Query: 1666 EFRIIAVNAIGKSEPSICTTPVKICEFVGGEKPDFIVPLKDL-VVPLGKLLTLQCEATGT 1724
++ A N GK C+ + + E P FI L+ +V + +C+ G+
Sbjct: 75 QYTCYASNVAGKDS---CSAQLGV-----QEPPRFIKKLEPSRIVKQDEHTRYECKIGGS 126
Query: 1725 PVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSR 1784
P K W ++ EI +++R+ V L ++ D+GDYTCEA+N+ G A +S+
Sbjct: 127 PEIKVLWYKDETEIQESSKFRMSFVESVAVLEMYNLSVEDSGDYTCEAHNAAGSASSSTS 186
Query: 1785 VKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDD 1844
+K+ PP + P+ + +G + ++ G P +VS K+ R ++S ++K +
Sbjct: 187 LKVKEPPVFRKKPHPVETLKGADVHLECELQGTPPFQVSWHKDKRELRSGKKYKIMSENF 246
Query: 1845 YIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITG 1882
I I + D G+Y SN GS + +I +
Sbjct: 247 LTSIHILNVDSADIGEYQCKASNDVGSYTCVGSITLKA 284
Score = 153 bits (389), Expect = 2e-41
Identities = 51/210 (24%), Positives = 93/210 (44%), Gaps = 1/210 (0%)
Query: 89 EKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRL 148
P F + + + LG+ T +C TGT K W ++ REI G Y++ L
Sbjct: 4 APPFFDLKPVSVDLALGESGTFKCHVTGTAPIKITWAKDNREIRPGGNYKMTLVENTATL 63
Query: 149 HFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMPNALY-IPEGDNTKVKIFY 207
+VT D G YTC A N G S+++ + PPR + + + ++T+ +
Sbjct: 64 TVLKVTKGDAGQYTCYASNVAGKDSCSAQLGVQEPPRFIKKLEPSRIVKQDEHTRYECKI 123
Query: 208 AGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSG 267
G ++V K+ +Q +F+ + ++ ++ + + ED+GDYT N++GS S
Sbjct: 124 GGSPEIKVLWYKDETEIQESSKFRMSFVESVAVLEMYNLSVEDSGDYTCEAHNAAGSASS 183
Query: 268 TFTINITGLPGPPIGPLDVSEITKHTCTLH 297
+ ++ + P P V + L
Sbjct: 184 STSLKVKEPPVFRKKPHPVETLKGADVHLE 213
Score = 153 bits (389), Expect = 2e-41
Identities = 51/210 (24%), Positives = 93/210 (44%), Gaps = 1/210 (0%)
Query: 1696 EKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRL 1755
P F + + + LG+ T +C TGT K W ++ REI G Y++ L
Sbjct: 4 APPFFDLKPVSVDLALGESGTFKCHVTGTAPIKITWAKDNREIRPGGNYKMTLVENTATL 63
Query: 1756 HFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMPNALY-IPEGDNTKVKIFY 1814
+VT D G YTC A N G S+++ + PPR + + + ++T+ +
Sbjct: 64 TVLKVTKGDAGQYTCYASNVAGKDSCSAQLGVQEPPRFIKKLEPSRIVKQDEHTRYECKI 123
Query: 1815 AGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSG 1874
G ++V K+ +Q +F+ + ++ ++ + + ED+GDYT N++GS S
Sbjct: 124 GGSPEIKVLWYKDETEIQESSKFRMSFVESVAVLEMYNLSVEDSGDYTCEAHNAAGSASS 183
Query: 1875 TFTINITGLPGPPIGPLDVSEITKHTCTLH 1904
+ ++ + P P V + L
Sbjct: 184 STSLKVKEPPVFRKKPHPVETLKGADVHLE 213
Score = 108 bits (271), Expect = 1e-25
Identities = 33/134 (24%), Positives = 57/134 (42%), Gaps = 9/134 (6%)
Query: 2056 EFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNA-NAIQNHNAQFQCTITGC 2114
++ YA N AG S S + +++P P I L + Q+ + +++C I G
Sbjct: 75 QYTCYASNVAG---KDSCSAQLGVQEP-----PRFIKKLEPSRIVKQDEHTRYECKIGGS 126
Query: 2115 PKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAE 2174
P+ + W K EI S++ + L + ++ D+ +Y C A N G S+
Sbjct: 127 PEIKVLWYKDETEIQESSKFRMSFVESVAVLEMYNLSVEDSGDYTCEAHNAAGSASSSTS 186
Query: 2175 LIIMTAPKFNVPPR 2188
L + P F P
Sbjct: 187 LKVKEPPVFRKKPH 200
Score = 106 bits (267), Expect = 4e-25
Identities = 29/122 (23%), Positives = 49/122 (40%), Gaps = 8/122 (6%)
Query: 2056 EFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCP 2115
++ A N AG S SS S V+ P ++ + +C + G P
Sbjct: 169 DYTCEAHNAAG-SASSSTSLKVKE-------PPVFRKKPHPVETLKGADVHLECELQGTP 220
Query: 2116 KPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAEL 2175
+SW K RE+ ++ I +E ++ I +V D EY C+A N G + +
Sbjct: 221 PFQVSWHKDKRELRSGKKYKIMSENFLTSIHILNVDSADIGEYQCKASNDVGSYTCVGSI 280
Query: 2176 II 2177
+
Sbjct: 281 TL 282
Score = 105 bits (263), Expect = 1e-24
Identities = 29/119 (24%), Positives = 47/119 (39%), Gaps = 1/119 (0%)
Query: 2087 APEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLI 2146
P + + + + F+C +TG I+W K +REI P + + +T TL
Sbjct: 5 PPFFDLKPVSVDLALGESGTFKCHVTGTAPIKITWAKDNREIRPGGNYKMTLVENTATLT 64
Query: 2147 INSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPRFRDTAYFESDVVVVVCV 2205
+ V DA +Y C A N G S A+L + P+F + + C
Sbjct: 65 VLKVTKGDAGQYTCYASNVAGKDSCSAQLGVQEPPRFIKKLEPSRIV-KQDEHTRYECK 122
Score = 101 bits (254), Expect = 2e-23
Identities = 40/180 (22%), Positives = 69/180 (38%), Gaps = 29/180 (16%)
Query: 1626 GSTAQFLEREVGGA-----IWLKCNDYNVLECSFSVLNLVEGNDYEFRI----------- 1669
++ E ++GG+ +W K D ++ S + +
Sbjct: 114 DEHTRY-ECKIGGSPEIKVLWYK--DETEIQESSKFRMSFVESVAVLEMYNLSVEDSGDY 170
Query: 1670 --IAVNAIGKSEPSICTTPVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVP 1727
A NA G + S + VK E P F + G + L+CE GTP
Sbjct: 171 TCEAHNAAGSAS-SSTSLKVK-------EPPVFRKKPHPVETLKGADVHLECELQGTPPF 222
Query: 1728 KCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKI 1787
+ W ++ RE+ SG +Y++ + + +H V D G+Y C+A N VG + +
Sbjct: 223 QVSWHKDKRELRSGKKYKIMSENFLTSIHILNVDSADIGEYQCKASNDVGSYTCVGSITL 282
Score = 101 bits (254), Expect = 2e-23
Identities = 37/160 (23%), Positives = 60/160 (37%), Gaps = 23/160 (14%)
Query: 34 WLKCNDYNVLECSFSVLNLVEGNDYEFRI-------------IAVNAIGKSEPSICTTPV 80
W K D ++ S + + A NA G + S + V
Sbjct: 133 WYK--DETEIQESSKFRMSFVESVAVLEMYNLSVEDSGDYTCEAHNAAGSAS-SSTSLKV 189
Query: 81 KICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVE 140
K E P F + G + L+CE GTP + W ++ RE+ SG +Y++
Sbjct: 190 K-------EPPVFRKKPHPVETLKGADVHLECELQGTPPFQVSWHKDKRELRSGKKYKIM 242
Query: 141 TAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKI 180
+ + +H V D G+Y C+A N VG + +
Sbjct: 243 SENFLTSIHILNVDSADIGEYQCKASNDVGSYTCVGSITL 282
Score = 70.2 bits (172), Expect = 1e-12
Identities = 23/107 (21%), Positives = 33/107 (30%), Gaps = 3/107 (2%)
Query: 1134 APKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQTI 1193
P + + GE T +G W + E+ P G K EN
Sbjct: 5 PPFFDLKP--VSVDLALGESGTFKCHVTGTAPIKITWAKDNREIRPGGNYKMTLVENTAT 62
Query: 1194 YRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYVVDKPSPPQGPLDV 1240
D+G YT N G DS S ++ V + P +
Sbjct: 63 LTVLKV-TKGDAGQYTCYASNVAGKDSCSAQLGVQEPPRFIKKLEPS 108
Score = 65.1 bits (159), Expect = 4e-11
Identities = 17/94 (18%), Positives = 29/94 (30%), Gaps = 3/94 (3%)
Query: 1134 APKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQTI 1193
P + L G + + G P W + E+ + K + T
Sbjct: 192 PPVFRKKP--HPVETLKGADVHLECELQGTPPFQVSWHKDKRELRSGKKYKIMSENFLTS 249
Query: 1194 YRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYV 1227
+ A D G Y + N VGS + + +
Sbjct: 250 IHILNVDSA-DIGEYQCKASNDVGSYTCVGSITL 282
Score = 63.6 bits (155), Expect = 2e-10
Identities = 23/108 (21%), Positives = 38/108 (35%), Gaps = 2/108 (1%)
Query: 1134 APKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQTI 1193
P+ L V E G P+ +W + E+ + + E+ +
Sbjct: 98 PPRFIKKLE-PSRIVKQDEHTRYECKIGGSPEIKVLWYKDETEIQESSKFRMSFVESVAV 156
Query: 1194 YRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYVVDKPSPPQGPLDVS 1241
+ DSG YT + N GS S+S + V + P + P V
Sbjct: 157 LEMYNLS-VEDSGDYTCEAHNAAGSASSSTSLKVKEPPVFRKKPHPVE 203
Score = 53.2 bits (128), Expect = 4e-07
Identities = 12/79 (15%), Positives = 23/79 (29%), Gaps = 1/79 (1%)
Query: 1430 RDITVKAGEDFSIHVPFMAFPQPAAFWFANDSIIDDSDTRVHKQLTMNSASLVVKNSQRS 1489
+ G D + P W + + + S+ + N +
Sbjct: 200 HPVETLKGADVHLECELQGTPPFQVSWHKDKRELRSGK-KYKIMSENFLTSIHILNVDSA 258
Query: 1490 DGGQYRLQLKNPAGFDTAT 1508
D G+Y+ + N G T
Sbjct: 259 DIGEYQCKASNDVGSYTCV 277
Score = 52.0 bits (125), Expect = 8e-07
Identities = 32/146 (21%), Positives = 54/146 (36%), Gaps = 16/146 (10%)
Query: 1366 YKMLLKTPTGELPTTIWSKIRPTSSTVY-CKDTTMNSSNSEPGKQSGPVIVEEQPN--KP 1422
YKM L T L T+ K+ + Y C + + +S S + V+E P K
Sbjct: 52 YKMTLVENTATL--TV-LKVTKGDAGQYTCYASNVAGKDS----CSAQLGVQEPPRFIKK 104
Query: 1423 VMDLSGVRDITVKAGEDFSIHVPFMAFPQPAAFWFANDSIIDDSDTRVHKQLTMNSASLV 1482
+ VK E P+ W+ +++ I +S + + A L
Sbjct: 105 LEPS-----RIVKQDEHTRYECKIGGSPEIKVLWYKDETEIQESS-KFRMSFVESVAVLE 158
Query: 1483 VKNSQRSDGGQYRLQLKNPAGFDTAT 1508
+ N D G Y + N AG +++
Sbjct: 159 MYNLSVEDSGDYTCEAHNAAGSASSS 184
Score = 50.9 bits (122), Expect = 2e-06
Identities = 17/79 (21%), Positives = 27/79 (34%), Gaps = 1/79 (1%)
Query: 1430 RDITVKAGEDFSIHVPFMAFPQPAAFWFANDSIIDDSDTRVHKQLTMNSASLVVKNSQRS 1489
+ + GE + W ++ I L N+A+L V +
Sbjct: 13 VSVDLALGESGTFKCHVTGTAPIKITWAKDNREIRPGG-NYKMTLVENTATLTVLKVTKG 71
Query: 1490 DGGQYRLQLKNPAGFDTAT 1508
D GQY N AG D+ +
Sbjct: 72 DAGQYTCYASNVAGKDSCS 90
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia
californica} SCOP: d.144.1.7
Length = 387
Score = 171 bits (434), Expect = 3e-46
Identities = 77/127 (60%), Positives = 96/127 (75%), Gaps = 1/127 (0%)
Query: 772 KRQYDFDETGKKIRGKADE-KVSDYDQYVFDIYSKYVPQPVDIKTSSVYDHYDILEEIGT 830
+ + G K+RGK D K++DYD++ DI+ KYVPQPV++K SVYD+YDILEE+G+
Sbjct: 2 RGSHHHHHHGSKVRGKYDGPKINDYDKFYEDIWKKYVPQPVEVKQGSVYDYYDILEELGS 61
Query: 831 GAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQLHHPKLINLHDAFEDDD 890
GAFGVVHRC E+ TG +F AKFI + L+K ++ EI IMNQLHHPKLINLHDAFED
Sbjct: 62 GAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKY 121
Query: 891 EMVLIFE 897
EMVLI E
Sbjct: 122 EMVLILE 128
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A
2f8v_A
Length = 194
Score = 163 bits (414), Expect = 9e-46
Identities = 49/196 (25%), Positives = 86/196 (43%), Gaps = 8/196 (4%)
Query: 476 MAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARH--HIFAEG 533
M +AP PL++ ++ A F+ I+G P P +SW + + I+ S I
Sbjct: 1 MTTQAPTFTQPLQSVVVLEGSTATFEAHISGFPVPEVSWFRDGQVISTSTLPGVQISFSD 60
Query: 534 DTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELII---MTAPKFNVPPRFRDTAYFDK 590
L I +V ++ Y +A N G ++ AEL++ P F + + +
Sbjct: 61 GRAKLTIPAVTKANSGRYSLKATNGSGQATSTAELLVKAETAPPNFVQRLQ---SMTVRQ 117
Query: 591 GENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAPYRVV 650
G V +++ TG P P + +YRD I+S F + L I +A D+ Y V
Sbjct: 118 GSQVRLQVRVTGIPTPVVKFYRDGAEIQSSLDFQISQEGDLYSLLIAEAYPEDSGTYSVN 177
Query: 651 AENDLGMDSAIVKIQI 666
A N +G ++ ++ +
Sbjct: 178 ATNSVGRATSTAELLV 193
Score = 154 bits (391), Expect = 1e-42
Identities = 49/190 (25%), Positives = 92/190 (48%), Gaps = 5/190 (2%)
Query: 89 EKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGAR--YRVETAGGVF 146
+ P F PL+ +VV G T + +G PVP+ W R+G+ IS+ ++ + G
Sbjct: 4 QAPTFTQPLQSVVVLEGSTATFEAHISGFPVPEVSWFRDGQVISTSTLPGVQISFSDGRA 63
Query: 147 RLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKI---GTPPRIDRMPNALYIPEGDNTKV 203
+L VT ++G Y+ +A N G A +++ + + PP + ++ + +G ++
Sbjct: 64 KLTIPAVTKANSGRYSLKATNGSGQATSTAELLVKAETAPPNFVQRLQSMTVRQGSQVRL 123
Query: 204 KIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSG 263
++ G V ++G +QS F+ + D + I E ED+G Y+VN +NS G
Sbjct: 124 QVRVTGIPTPVVKFYRDGAEIQSSLDFQISQEGDLYSLLIAEAYPEDSGTYSVNATNSVG 183
Query: 264 SVSGTFTINI 273
+ T + +
Sbjct: 184 RATSTAELLV 193
Score = 154 bits (391), Expect = 1e-42
Identities = 49/190 (25%), Positives = 92/190 (48%), Gaps = 5/190 (2%)
Query: 1696 EKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGAR--YRVETAGGVF 1753
+ P F PL+ +VV G T + +G PVP+ W R+G+ IS+ ++ + G
Sbjct: 4 QAPTFTQPLQSVVVLEGSTATFEAHISGFPVPEVSWFRDGQVISTSTLPGVQISFSDGRA 63
Query: 1754 RLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKI---GTPPRIDRMPNALYIPEGDNTKV 1810
+L VT ++G Y+ +A N G A +++ + + PP + ++ + +G ++
Sbjct: 64 KLTIPAVTKANSGRYSLKATNGSGQATSTAELLVKAETAPPNFVQRLQSMTVRQGSQVRL 123
Query: 1811 KIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSG 1870
++ G V ++G +QS F+ + D + I E ED+G Y+VN +NS G
Sbjct: 124 QVRVTGIPTPVVKFYRDGAEIQSSLDFQISQEGDLYSLLIAEAYPEDSGTYSVNATNSVG 183
Query: 1871 SVSGTFTINI 1880
+ T + +
Sbjct: 184 RATSTAELLV 193
Score = 112 bits (283), Expect = 3e-28
Identities = 31/122 (25%), Positives = 54/122 (44%), Gaps = 5/122 (4%)
Query: 449 EFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCP 508
+ + A N +G A+++ ++ P + L++ Q + Q +TG P
Sbjct: 77 RYSLKATNGSG-----QATSTAELLVKAETAPPNFVQRLQSMTVRQGSQVRLQVRVTGIP 131
Query: 509 KPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAEL 568
P + + + EI S I EGD Y+L+I Y D+ Y A N G ++ AEL
Sbjct: 132 TPVVKFYRDGAEIQSSLDFQISQEGDLYSLLIAEAYPEDSGTYSVNATNSVGRATSTAEL 191
Query: 569 II 570
++
Sbjct: 192 LV 193
Score = 112 bits (283), Expect = 3e-28
Identities = 31/122 (25%), Positives = 54/122 (44%), Gaps = 5/122 (4%)
Query: 2056 EFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCP 2115
+ + A N +G A+++ ++ P + L++ Q + Q +TG P
Sbjct: 77 RYSLKATNGSG-----QATSTAELLVKAETAPPNFVQRLQSMTVRQGSQVRLQVRVTGIP 131
Query: 2116 KPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAEL 2175
P + + + EI S I EGD Y+L+I Y D+ Y A N G ++ AEL
Sbjct: 132 TPVVKFYRDGAEIQSSLDFQISQEGDLYSLLIAEAYPEDSGTYSVNATNSVGRATSTAEL 191
Query: 2176 II 2177
++
Sbjct: 192 LV 193
Score = 105 bits (265), Expect = 8e-26
Identities = 29/127 (22%), Positives = 51/127 (40%), Gaps = 7/127 (5%)
Query: 2083 MAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARH--HIFAEG 2140
M +AP PL++ ++ A F+ I+G P P +SW + + I+ S I
Sbjct: 1 MTTQAPTFTQPLQSVVVLEGSTATFEAHISGFPVPEVSWFRDGQVISTSTLPGVQISFSD 60
Query: 2141 DTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELII---MTAPKFNVPPRFRDTAYFES 2197
L I +V ++ Y +A N G ++ AEL++ P F + +
Sbjct: 61 GRAKLTIPAVTKANSGRYSLKATNGSGQATSTAELLVKAETAPPNFVQRL--QSMTVRQG 118
Query: 2198 DVVVVVC 2204
V +
Sbjct: 119 SQVRLQV 125
Score = 105 bits (263), Expect = 1e-25
Identities = 32/122 (26%), Positives = 58/122 (47%), Gaps = 5/122 (4%)
Query: 59 EFRIIAVNAIGKSEPSICTTPVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTP 118
+ + A N G++ T + + P+F+ L+ + V G + LQ TG P
Sbjct: 77 RYSLKATNGSGQAT---STAELLVKA--ETAPPNFVQRLQSMTVRQGSQVRLQVRVTGIP 131
Query: 119 VPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRV 178
P ++ R+G EI S +++ G ++ L E D+G Y+ A NSVG A +++ +
Sbjct: 132 TPVVKFYRDGAEIQSSLDFQISQEGDLYSLLIAEAYPEDSGTYSVNATNSVGRATSTAEL 191
Query: 179 KI 180
+
Sbjct: 192 LV 193
Score = 105 bits (263), Expect = 1e-25
Identities = 32/122 (26%), Positives = 58/122 (47%), Gaps = 5/122 (4%)
Query: 1666 EFRIIAVNAIGKSEPSICTTPVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTP 1725
+ + A N G++ T + + P+F+ L+ + V G + LQ TG P
Sbjct: 77 RYSLKATNGSGQAT---STAELLVKA--ETAPPNFVQRLQSMTVRQGSQVRLQVRVTGIP 131
Query: 1726 VPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRV 1785
P ++ R+G EI S +++ G ++ L E D+G Y+ A NSVG A +++ +
Sbjct: 132 TPVVKFYRDGAEIQSSLDFQISQEGDLYSLLIAEAYPEDSGTYSVNATNSVGRATSTAEL 191
Query: 1786 KI 1787
+
Sbjct: 192 LV 193
Score = 75.5 bits (186), Expect = 3e-15
Identities = 25/105 (23%), Positives = 47/105 (44%), Gaps = 5/105 (4%)
Query: 573 APKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGG--HFHVETSER 630
AP F P + +G + +G+P P+++W+RD +VI + + S+
Sbjct: 5 APTFTQPLQSVVVL---EGSTATFEAHISGFPVPEVSWFRDGQVISTSTLPGVQISFSDG 61
Query: 631 HAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQISDRPDPPQF 675
A LTI + ++ Y + A N G ++ ++ + PP F
Sbjct: 62 RAKLTIPAVTKANSGRYSLKATNGSGQATSTAELLVKAETAPPNF 106
Score = 72.4 bits (178), Expect = 3e-14
Identities = 33/169 (19%), Positives = 65/169 (38%), Gaps = 17/169 (10%)
Query: 1064 VLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLI-----ENHEYEFRVCAVNAAGQGP 1118
V W +G+ I + Q + L + + + + A N +GQ
Sbjct: 37 VSWFRDGQVISTSTLPGVQIS------FSDGRAKLTIPAVTKANSGRYSLKATNGSGQ-- 88
Query: 1119 WSSSSDIIMCCAPPCAPKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVS 1178
++S+ ++ A P L + MTV G + + V +G P P + +G E+
Sbjct: 89 -ATSTAELLVKAETAPPNFVQRL--QSMTVRQGSQVRLQVRVTGIPTPVVKFYRDGAEIQ 145
Query: 1179 PDGRIKFETSENQTIYRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYV 1227
+ + A DSG+Y++ N+VG +++ ++ V
Sbjct: 146 SSLDFQISQEGDLYSLLIAEAYPE-DSGTYSVNATNSVGRATSTAELLV 193
Score = 69.7 bits (171), Expect = 3e-13
Identities = 25/103 (24%), Positives = 43/103 (41%), Gaps = 3/103 (2%)
Query: 1134 APKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQTI 1193
AP T L + + VL G T SG P P W +G +S + S +
Sbjct: 5 APTFTQPL--QSVVVLEGSTATFEAHISGFPVPEVSWFRDGQVISTSTLPGVQISFSDGR 62
Query: 1194 YRNK-SAKRATDSGSYTIQLVNTVGSDSASCKVYVVDKPSPPQ 1235
+ A +SG Y+++ N G +++ ++ V + +PP
Sbjct: 63 AKLTIPAVTKANSGRYSLKATNGSGQATSTAELLVKAETAPPN 105
Score = 58.2 bits (141), Expect = 2e-09
Identities = 20/101 (19%), Positives = 42/101 (41%), Gaps = 2/101 (1%)
Query: 183 PPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVL--DDYII 240
P + ++ + EG + +G EVS ++G+V+ + + D
Sbjct: 5 APTFTQPLQSVVVLEGSTATFEAHISGFPVPEVSWFRDGQVISTSTLPGVQISFSDGRAK 64
Query: 241 IFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPI 281
+ I + K ++G Y++ +N SG + T + + PP
Sbjct: 65 LTIPAVTKANSGRYSLKATNGSGQATSTAELLVKAETAPPN 105
Score = 58.2 bits (141), Expect = 2e-09
Identities = 20/101 (19%), Positives = 42/101 (41%), Gaps = 2/101 (1%)
Query: 1790 PPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVL--DDYII 1847
P + ++ + EG + +G EVS ++G+V+ + + D
Sbjct: 5 APTFTQPLQSVVVLEGSTATFEAHISGFPVPEVSWFRDGQVISTSTLPGVQISFSDGRAK 64
Query: 1848 IFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPI 1888
+ I + K ++G Y++ +N SG + T + + PP
Sbjct: 65 LTIPAVTKANSGRYSLKATNGSGQATSTAELLVKAETAPPN 105
Score = 56.3 bits (136), Expect = 1e-08
Identities = 19/96 (19%), Positives = 39/96 (40%), Gaps = 2/96 (2%)
Query: 1413 VIVEEQPNKPVMDLSGVRDITVKAGEDFSIHVPFMAFPQPAAFWFANDSIIDDSDTRVHK 1472
++V+ + P + ++ +TV+ G + V P P ++ + + I S
Sbjct: 95 LLVKAETAPPNF-VQRLQSMTVRQGSQVRLQVRVTGIPTPVVKFYRDGAEIQSSL-DFQI 152
Query: 1473 QLTMNSASLVVKNSQRSDGGQYRLQLKNPAGFDTAT 1508
+ SL++ + D G Y + N G T+T
Sbjct: 153 SQEGDLYSLLIAEAYPEDSGTYSVNATNSVGRATST 188
Score = 51.3 bits (123), Expect = 5e-07
Identities = 21/95 (22%), Positives = 38/95 (40%), Gaps = 3/95 (3%)
Query: 1430 RDITVKAGEDFSIHVPFMAFPQPAAFWFANDSIIDDSD-TRVHKQLTMNSASLVVKNSQR 1488
+ + V G + FP P WF + +I S V + A L + +
Sbjct: 13 QSVVVLEGSTATFEAHISGFPVPEVSWFRDGQVISTSTLPGVQISFSDGRAKLTIPAVTK 72
Query: 1489 SDGGQYRLQLKNPAGFDTATLHSRLRTLPDSVNPR 1523
++ G+Y L+ N +G T+T + L ++ P
Sbjct: 73 ANSGRYSLKATNGSGQATST--AELLVKAETAPPN 105
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase,
glycoprotein, receptor protei tyrosine phosphatase, cell
adhesion; HET: NAG; 3.10A {Homo sapiens}
Length = 731
Score = 176 bits (446), Expect = 3e-45
Identities = 89/690 (12%), Positives = 165/690 (23%), Gaps = 110/690 (15%)
Query: 108 LTLQCEATGTPVPKCRWLRNGREISSGARYRVE---TAGGVFRLHFNEVTDVDNGDYTCE 164
L + + P+ W +G + R + +++ F +T G +
Sbjct: 94 LNVYVKVNNGPLGNPIWNISGDPTRTWNRAELAISTFWPNFYQVIFEVITSGHQGYLAID 153
Query: 165 AYNSVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVV 224
+G T + + G + G L G V
Sbjct: 154 EVKVLGHPCT--------RTPHFLRIQNVEVNAGQFATFQCSAIGRTVAGDRLWLQGIDV 205
Query: 225 QSDDRFKFTVLDDYIIIF---IKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPI 281
+ + V I + K DAG Y + G + + P PI
Sbjct: 206 RDAPLKEIKVTSSRRFIASFNVVNTTKRDAGKYRCMIRTEGGVGISNYAELVVKEPPVPI 265
Query: 282 GPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHDTTFIVQGL 341
P ++ + + N +G + VE S W T++ + L
Sbjct: 266 APPQLASVGATYLWIQLNANSINGDGPIVAREVEYCTASGS-WNDRQPV-DSTSYKIGHL 323
Query: 342 TEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPS-PPGIPVVTQVGGDFVNLSWDK 400
EY V+ G G ++ ++ P P V +V + + W+
Sbjct: 324 DPDTEYEISVLLTRPGEGGTGSPG-PALRTRTKCADPMRGPRKLEVVEVKSRQITIRWEP 382
Query: 401 PLDDGGS-RIQGYWIDKHEVGSDAWQRVNVAICAPS----QINIPNLIEGRQYEFRVYAQ 455
+ + Q Q I NL ++
Sbjct: 383 FGYNVTRCHSYNLTVHYCYQVGGQEQVREEVSWDTENSHPQHTITNLSPYTNVSVKLILM 442
Query: 456 NEAGLS------------LPSSASNSVQIKDPMAAKAPEIIV----PLRNANAIQNHNAQ 499
N G LP + +I + P + I +
Sbjct: 443 NPEGRKESQELIVQTDEDLPGAVPTESIQGST---FEEKIFLQWREPTQTYGVITLYEIT 499
Query: 500 FQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKG 559
++ + P+ +S G + H +F L + Y + RA
Sbjct: 500 YKAVSSFDPEIDLSNQSGRVSKLGNETHFLFFG-----LYPGTTYSF----TI-RASTAK 549
Query: 560 GVKSTKAELIIMTAPKF-NVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIE 618
G A T ++P +T V V + ++ Y+
Sbjct: 550 GF-GPPATNQFTTKISAPSMPAYELETPLNQTDNTVTVMLKPAHSRGAPVSVYQ------ 602
Query: 619 SGGHFHVETSERHAILTIRDASNVDTAPYRVVAENDLGMDSA---IVKIQISDRPDPPQF 675
+ E T + + P + +N ++S + F
Sbjct: 603 ------IVVEEERPRRTKKTTEILKCYPVPIHFQNASLLNSQYYFAAEFPADSLQAAQPF 656
Query: 676 PTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSWIRVGNTRFTTMAITGLSPG 735
T+ D N + T L P
Sbjct: 657 -TIGD----------------------------------------NKTYNGYWNTPLLPY 675
Query: 736 HQYEFRVYAENVYGRSDPSTTSDLITTKDT 765
Y A + + T
Sbjct: 676 KSYRIYFQAASRANGETKIDCVQVATKGAA 705
Score = 165 bits (419), Expect = 6e-42
Identities = 74/518 (14%), Positives = 136/518 (26%), Gaps = 54/518 (10%)
Query: 1715 LTLQCEATGTPVPKCRWLRNGREISSGARYRVE---TAGGVFRLHFNEVTDVDNGDYTCE 1771
L + + P+ W +G + R + +++ F +T G +
Sbjct: 94 LNVYVKVNNGPLGNPIWNISGDPTRTWNRAELAISTFWPNFYQVIFEVITSGHQGYLAID 153
Query: 1772 AYNSVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVV 1831
+G T + + G + G L G V
Sbjct: 154 EVKVLGHPCT--------RTPHFLRIQNVEVNAGQFATFQCSAIGRTVAGDRLWLQGIDV 205
Query: 1832 QSDDRFKFTVLDDYIIIF---IKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPI 1888
+ + V I + K DAG Y + G + + P PI
Sbjct: 206 RDAPLKEIKVTSSRRFIASFNVVNTTKRDAGKYRCMIRTEGGVGISNYAELVVKEPPVPI 265
Query: 1889 GPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHDTTFIVQGL 1948
P ++ + + N +G + VE S W T++ + L
Sbjct: 266 APPQLASVGATYLWIQLNANSINGDGPIVAREVEYCTASGS-WNDRQPV-DSTSYKIGHL 323
Query: 1949 TEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPS-PPGIPVVTQVGGDFVNLSWDK 2007
EY V+ G G ++ ++ P P V +V + + W+
Sbjct: 324 DPDTEYEISVLLTRPGEGGTGSPG-PALRTRTKCADPMRGPRKLEVVEVKSRQITIRWEP 382
Query: 2008 PLDDGGS-RIQGYWIDKHEVGSDAWQRVNVAICAPS----QINIPNLIEGRQYEFRVYAQ 2062
+ + Q Q I NL ++
Sbjct: 383 FGYNVTRCHSYNLTVHYCYQVGGQEQVREEVSWDTENSHPQHTITNLSPYTNVSVKLILM 442
Query: 2063 NEAGLS------------LPSSASNSVQIKDPMAAKAPEIIV----PLRNANAIQNHNAQ 2106
N G LP + +I + P + I +
Sbjct: 443 NPEGRKESQELIVQTDEDLPGAVPTESIQGST---FEEKIFLQWREPTQTYGVITLYEIT 499
Query: 2107 FQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKG 2166
++ + P+ +S G + H +F L + Y + RA
Sbjct: 500 YKAVSSFDPEIDLSNQSGRVSKLGNETHFLFFG-----LYPGTTYSF----TI-RASTAK 549
Query: 2167 GVKSTKAELIIMTAPKF-NVPPRFRDTAYFESDVVVVV 2203
G A T ++P +T ++D V V
Sbjct: 550 GF-GPPATNQFTTKISAPSMPAYELETPLNQTDNTVTV 586
Score = 144 bits (365), Expect = 3e-35
Identities = 73/522 (13%), Positives = 141/522 (27%), Gaps = 91/522 (17%)
Query: 914 AGDSLTLYWTPPRDNGGSEITNYVVEK-KDYNSTVWTKVSSYVTTPFVRVRNLAIGSTYE 972
AG T + + +D SS V N +
Sbjct: 178 AGQFATFQCSAIGRTVAGDRLWLQGIDVRDAPLKEIKVTSSRRFIASFNVVNTTKRDAGK 237
Query: 973 FRVMAENQYG--LSKPALTIDPIKAKHPFDVPGAPGAPKGVDSTEDSISLVWSKPRHDGG 1030
+R M + G +S A + + P P+ + + + +G
Sbjct: 238 YRCMIRTEGGVGISNYAELV-------VKEPPVPIAPPQLASVGATYLWIQLNANSINGD 290
Query: 1031 SPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEGKSIGSERGSTAQFLELLLMF 1090
PI VE + W + TS K
Sbjct: 291 GPIVAREVEYC-TASGSW--NDRQPVDSTSYK---------------------------- 319
Query: 1091 IPNRVTSLIENHEYEFRVCAVNA--AGQGPWSSSSDIIMCCA-PPCAPKITS--DLSIRD 1145
+ L + EYE V G G + CA P P+ ++ R
Sbjct: 320 ----IGHLDPDTEYEISVLLTRPGEGGTGSPGPALRTRTKCADPMRGPRKLEVVEVKSRQ 375
Query: 1146 MTV---------LAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQTIYRN 1196
+T+ + +TV + + + ++T + +
Sbjct: 376 ITIRWEPFGYNVTRCHSYNLTVHYCYQVGGQEQVRE---------EVSWDTENSHPQHTI 426
Query: 1197 KSAKRATDSGSYTIQL--VNTVG-SDSASCKVYVV-DKPSPPQGPLDVSDITPESCSLSW 1252
+ T+ +++L +N G +S V D P E L W
Sbjct: 427 TNLSPYTN---VSVKLILMNPEGRKESQELIVQTDEDLPGAVPTESIQGSTFEEKIFLQW 483
Query: 1253 KPPLDDGGSPITNYVV--------EKYESATGFWSKLSSFVRSPAYDVFGLETNRQYRFR 1304
+ P G IT Y + + + ++S + FGL Y F
Sbjct: 484 REPTQTYGV-ITLYEITYKAVSSFDPEIDLSNQSGRVSKLGNETHFLFFGLYPGTTYSFT 542
Query: 1305 VRAENQYGVSEPLELDNSITAKFPFTVPDPPGQPQIVDWDTNNAT--LMWDRPRTDGGSK 1362
+RA G P + P P + + T +M G+
Sbjct: 543 IRASTAKGFGPPAT----NQFTTKISAPSMPAYELETPLNQTDNTVTVMLKPA-HSRGAP 597
Query: 1363 IQGYKMLLKTPTGELPTTIWSKIRPTSSTVYCKDTTMNSSNS 1404
+ Y+++++ ++ ++ ++ ++ +S
Sbjct: 598 VSVYQIVVEEERPRRTKKTTEILKCYPVPIHFQNASLLNSQY 639
Score = 137 bits (345), Expect = 8e-33
Identities = 51/304 (16%), Positives = 90/304 (29%), Gaps = 5/304 (1%)
Query: 1093 NRVTSLIENHEYEFRVCAVNAAGQGPWSSSSDIIMCCAPPCAPKITSDLSIRDMTVLAGE 1152
NR I F G + + + L I+++ V AG+
Sbjct: 121 NRAELAISTFWPNFYQVIFEVITSGHQGYLAIDEVKVLGHPCTRTPHFLRIQNVEVNAGQ 180
Query: 1153 EFTITVPFSGRPKPTPIWTVNGDEVS--PDGRIKFETSENQTIYRNKSAKRATDSGSYTI 1210
T GR + G +V P IK +S N D+G Y
Sbjct: 181 FATFQCSAIGRTVAGDRLWLQGIDVRDAPLKEIKVTSSRRFIASFNVVNTTKRDAGKYRC 240
Query: 1211 QLVNTVGSDSASCKVYVVDKPSPPQGPLDVSDITPESCSLSWKPPLDDGGSPITNYVVEK 1270
+ G ++ VV +P P P ++ + + +G PI VE
Sbjct: 241 MIRTEGGVGISNYAELVVKEPPVPIAPPQLASVGATYLWIQLNANSINGDGPIVAREVE- 299
Query: 1271 YESATGFWSKLSSFVRSPAYDVFGLETNRQYRFRVRAENQYGVSEPLELDNSITAKFPFT 1330
Y +A+G W+ V S +Y + L+ + +Y V T
Sbjct: 300 YCTASGSWNDRQP-VDSTSYKIGHLDPDTEYEISVLLTRPGEGGTGSPGPALRTRTKCAD 358
Query: 1331 VPDPPGQPQIVDWDTNNATLMWDRPRTDGGS-KIQGYKMLLKTPTGELPTTIWSKIRPTS 1389
P + ++V+ + T+ W+ + + G T
Sbjct: 359 PMRGPRKLEVVEVKSRQITIRWEPFGYNVTRCHSYNLTVHYCYQVGGQEQVREEVSWDTE 418
Query: 1390 STVY 1393
++
Sbjct: 419 NSHP 422
Score = 136 bits (342), Expect = 2e-32
Identities = 59/504 (11%), Positives = 122/504 (24%), Gaps = 107/504 (21%)
Query: 898 VLDRPHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTKVSSYVTT 957
V + P P L + NG I VE S W +T
Sbjct: 258 VKEPPVPIAPPQLASVGATYLWIQLNANSINGDGPIVAREVEYCT-ASGSWNDRQPVDST 316
Query: 958 PFVRVRNLAIGSTYEFRVMAENQYGLSKPALTIDPIKAKHPFDVP-GAPGAPKGVDSTED 1016
+ + +L + YE V+ + ++ + P P + V+
Sbjct: 317 SYK-IGHLDPDTEYEISVLLTRPGEGGTGSPG-PALRTRTKCADPMRGPRKLEVVEVKSR 374
Query: 1017 SISLVWSKPRHDGGS-PIQRYIVE-KRLISDDKWIKASMAHIPDTSLKYVLWVSEGKSIG 1074
I++ W ++ V + + ++ ++ + S
Sbjct: 375 QITIRWEPFGYNVTRCHSYNLTVHYCYQVGGQEQVREEVSWDTENSHPQH---------- 424
Query: 1075 SERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPWSSSSDIIMCCAPPCA 1134
+T+L ++ +N G+ P
Sbjct: 425 -------------------TITNLSPYTNVSVKLILMNPEGRKESQELIVQTDEDLPGAV 465
Query: 1135 PKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPI--------WTVNGDEVSPDG---RI 1183
P ++ E I + + + + V+ + D
Sbjct: 466 P---TESIQGSTF-----EEKIFLQWREPTQTYGVITLYEITYKAVSSFDPEIDLSNQSG 517
Query: 1184 KFETSENQTIYRNKSAKRATDSGSYTIQL--VNTVGSDSASCKVYVV---DKPSPPQGPL 1238
+ N+T + T +Y+ + G PS P L
Sbjct: 518 RVSKLGNETHFLFFGLYPGT---TYSFTIRASTAKG-FGPPATNQFTTKISAPSMPAYEL 573
Query: 1239 DVS-DITPESCSLSWKPPLDDGGSPITNYVVEKYESATGFWSKLSSFVRSP--------- 1288
+ + T + ++ KP G P++ Y + E K + ++
Sbjct: 574 ETPLNQTDNTVTVMLKPAHSRGA-PVSVYQIVVEEERPRRTKKTTEILKCYPVPIHFQNA 632
Query: 1289 ---------------------------------AYDVFGLETNRQYRFRVRAENQYGVSE 1315
Y L + YR +A ++
Sbjct: 633 SLLNSQYYFAAEFPADSLQAAQPFTIGDNKTYNGYWNTPLLPYKSYRIYFQAASRANGET 692
Query: 1316 PLELDNSITAKFPFTVPDPPGQPQ 1339
++ T P P + Q
Sbjct: 693 KIDCVQVATKGAATPKPVPEPEKQ 716
Score = 134 bits (337), Expect = 8e-32
Identities = 65/473 (13%), Positives = 131/473 (27%), Gaps = 44/473 (9%)
Query: 50 LNLVEGNDYEFRIIAVNAIGKSEPSICTTPVKICEFVGGEKPDFIVPLKDLVVPLGKLLT 109
++ N Y+ + + + +I V + + ++++ V G+ T
Sbjct: 127 ISTFWPNFYQVIFEVITSGHQGYLAIDEVKVLGHPC---TRTPHFLRIQNVEVNAGQFAT 183
Query: 110 LQCEATGTPVPKCRWLRNGREISSGARYR---VETAGGVFRLHFNEVTDVDNGDYTCEAY 166
QC A G V R G ++ + + + T D G Y C
Sbjct: 184 FQCSAIGRTVAGDRLWLQGIDVRDAPLKEIKVTSSRRFIASFNVVNTTKRDAGKYRCMIR 243
Query: 167 NSVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQ- 225
G ++ + P + T + I Q S+ +G +V
Sbjct: 244 TEGGVGISNYAELVVKEP--PVPIAPPQLASVGATYLWI-----QLNANSINGDGPIVAR 296
Query: 226 ------SDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITG---- 275
+ + D I + + + +V L+ +G+ +
Sbjct: 297 EVEYCTASGSWNDRQPVDSTSYKIGHLDPDTEYEISVLLTRPGEGGTGSPGPALRTRTKC 356
Query: 276 -LPGPPIGPLDVSEITKHTCTLHWNPPKYDGG-LKVTHYVVE-RRDISMPHW----ICIS 328
P L+V E+ T+ W P Y+ + V + +
Sbjct: 357 ADPMRGPRKLEVVEVKSRQITIRWEPFGYNVTRCHSYNLTVHYCYQVGGQEQVREEVSWD 416
Query: 329 TTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQ 388
T + L+ ++ +N G + ++ D P +
Sbjct: 417 TENSHPQHTITNLSPYTNVSVKLILMNPEGRKES----QELIVQTDEDLPGAVPTESIQG 472
Query: 389 -VGGDFVNLSWDKPLDDGGSRIQGYWI-------DKHEVGSDAWQRVNVAICAPSQINIP 440
+ + L W +P G I Y I E+ + +
Sbjct: 473 STFEEKIFLQWREPTQTYG-VITLYEITYKAVSSFDPEIDLSNQSGRVSKLGNETHFLFF 531
Query: 441 NLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAI 493
L G Y F + A G P++ + +I P + N +
Sbjct: 532 GLYPGTTYSFTIRASTAKGFGPPATNQFTTKISAPSMPAYELETPLNQTDNTV 584
Score = 134 bits (337), Expect = 8e-32
Identities = 65/473 (13%), Positives = 131/473 (27%), Gaps = 44/473 (9%)
Query: 1657 LNLVEGNDYEFRIIAVNAIGKSEPSICTTPVKICEFVGGEKPDFIVPLKDLVVPLGKLLT 1716
++ N Y+ + + + +I V + + ++++ V G+ T
Sbjct: 127 ISTFWPNFYQVIFEVITSGHQGYLAIDEVKVLGHPC---TRTPHFLRIQNVEVNAGQFAT 183
Query: 1717 LQCEATGTPVPKCRWLRNGREISSGARYR---VETAGGVFRLHFNEVTDVDNGDYTCEAY 1773
QC A G V R G ++ + + + T D G Y C
Sbjct: 184 FQCSAIGRTVAGDRLWLQGIDVRDAPLKEIKVTSSRRFIASFNVVNTTKRDAGKYRCMIR 243
Query: 1774 NSVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQ- 1832
G ++ + P + T + I Q S+ +G +V
Sbjct: 244 TEGGVGISNYAELVVKEP--PVPIAPPQLASVGATYLWI-----QLNANSINGDGPIVAR 296
Query: 1833 ------SDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITG---- 1882
+ + D I + + + +V L+ +G+ +
Sbjct: 297 EVEYCTASGSWNDRQPVDSTSYKIGHLDPDTEYEISVLLTRPGEGGTGSPGPALRTRTKC 356
Query: 1883 -LPGPPIGPLDVSEITKHTCTLHWNPPKYDGG-LKVTHYVVE-RRDISMPHW----ICIS 1935
P L+V E+ T+ W P Y+ + V + +
Sbjct: 357 ADPMRGPRKLEVVEVKSRQITIRWEPFGYNVTRCHSYNLTVHYCYQVGGQEQVREEVSWD 416
Query: 1936 TTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQ 1995
T + L+ ++ +N G + ++ D P +
Sbjct: 417 TENSHPQHTITNLSPYTNVSVKLILMNPEGRKES----QELIVQTDEDLPGAVPTESIQG 472
Query: 1996 -VGGDFVNLSWDKPLDDGGSRIQGYWI-------DKHEVGSDAWQRVNVAICAPSQINIP 2047
+ + L W +P G I Y I E+ + +
Sbjct: 473 STFEEKIFLQWREPTQTYG-VITLYEITYKAVSSFDPEIDLSNQSGRVSKLGNETHFLFF 531
Query: 2048 NLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAI 2100
L G Y F + A G P++ + +I P + N +
Sbjct: 532 GLYPGTTYSFTIRASTAKGFGPPATNQFTTKISAPSMPAYELETPLNQTDNTV 584
Score = 91.4 bits (226), Expect = 2e-18
Identities = 42/277 (15%), Positives = 69/277 (24%), Gaps = 58/277 (20%)
Query: 1882 GLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHW--------IC 1933
LPG + L W P G +T Y + + +S
Sbjct: 460 DLPGAVPTESIQGSTFEEKIFLQWREPTQTYG-VITLYEITYKAVSSFDPEIDLSNQSGR 518
Query: 1934 ISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVV 1993
+S ++T F+ GL G Y F + A G GPP + + PS P +
Sbjct: 519 VSKLGNETHFLFFGLYPGTTYSFTIRASTAKGFGPP----ATNQFTTKISAPSMPAYELE 574
Query: 1994 TQV--GGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVN-VAICAPSQIN----- 2045
T + + V + G + Y I E ++ + C P I+
Sbjct: 575 TPLNQTDNTVTVMLKPAHSRGAP-VSVYQIVVEEERPRRTKKTTEILKCYPVPIHFQNAS 633
Query: 2046 -----------------------------------IPNLIEGRQYEFRVYAQNEAGLSLP 2070
L+ + Y A + A
Sbjct: 634 LLNSQYYFAAEFPADSLQAAQPFTIGDNKTYNGYWNTPLLPYKSYRIYFQAASRANGETK 693
Query: 2071 SSASNSVQIKDPMAAKAPEII-VPLRNANAIQNHNAQ 2106
PE ++H+
Sbjct: 694 IDCVQVATKGAATPKPVPEPEKQTDHTVKGTKHHHHH 730
Score = 84.8 bits (209), Expect = 2e-16
Identities = 78/563 (13%), Positives = 136/563 (24%), Gaps = 116/563 (20%)
Query: 1150 AGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQTIYRNKSAKRATDSGSYT 1209
+ V + P PIW ++GD R + S + + T
Sbjct: 90 PPGLLNVYVKVNNGPLGNPIWNISGDPTRTWNRAELAISTFWPNFYQVIFEVITSGHQGY 149
Query: 1210 IQLVNTVGSDSASCKVYVVDKPSPPQGPLDVSDITPESCSLSWKPPLDDGGSPITNYVVE 1269
+ + + + + ++ CS + D
Sbjct: 150 LAIDEVKVLGHPCTRTPHFLRIQNVE--VNAGQFATFQCSAIGRTVAGD----RLWLQGI 203
Query: 1270 KYESATGFWSKLSSFVRSPA-YDVFGLETNRQYRFRVRAENQYGVSEPLELDNSITAKFP 1328
A K++S R A ++V ++R + GV +
Sbjct: 204 DVRDAPLKEIKVTSSRRFIASFNVVNTTKRDAGKYRCMIRTEGGVGIS-----NYAELVV 258
Query: 1329 FTVPDPPGQPQIVDWDTNNATLMWDRPRTDGGSKIQGYKMLLKTPTGELPTTIWSKIRPT 1388
P P PQ+ + + +G I ++ T +G W+ +P
Sbjct: 259 KEPPVPIAPPQLASVGATYLWIQLNANSINGDGPIVAREVEYCTASGS-----WNDRQPV 313
Query: 1389 SSTVYC-----KDTT-------MNSSNSEPGKQSGPVIVEEQPNKPVMDLSGVRDITVKA 1436
ST Y DT G + + P+ G R + V
Sbjct: 314 DSTSYKIGHLDPDTEYEISVLLTRPGEGGTGSPGPALRTRTKCADPM---RGPRKLEVVE 370
Query: 1437 GEDFSIHVPFMAFPQPAA---------FWFANDSIIDDSDTRVHKQLTMNSASLVVKNSQ 1487
+ I + + F + + V + + N
Sbjct: 371 VKSRQITIRWEPFGYNVTRCHSYNLTVHYCYQVGGQEQVREEVSWDTENSHPQHTITNLS 430
Query: 1488 RSDGGQY--RLQLKNPAGFDTATLHSRLRTLPDSVNPRCHLPSSTSKERPKFPTHPNHQP 1545
+L L NP G R + + T ++ P + Q
Sbjct: 431 P--YTNVSVKLILMNPEG----------RKESQELIVQ------TDEDLPGAVPTESIQG 472
Query: 1546 WLKWARASLTSKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIP 1605
+ E+ I L W +P G I Y + + +S
Sbjct: 473 --------------STFEEKIFLQWREPTQTYGV-ITLYEITYKAVSSFDP--------- 508
Query: 1606 DTSLKYVLWVSEGKSIGSERGSTAQFLEREVGGAIWLKCNDYNVLECSFSVLNLVEGNDY 1665
E+ + E F L G Y
Sbjct: 509 -----------------------------EIDLSNQSGRVSKLGNETHFLFFGLYPGTTY 539
Query: 1666 EFRIIAVNAIGKSEPS--ICTTP 1686
F I A A G P+ TT
Sbjct: 540 SFTIRASTAKGFGPPATNQFTTK 562
Score = 72.1 bits (176), Expect = 1e-12
Identities = 44/350 (12%), Positives = 81/350 (23%), Gaps = 102/350 (29%)
Query: 1350 LMWDRPRTDGGSKIQGYKMLLKTPTGELPTTIWSK--------------IRPTSSTVYCK 1395
+ + + G + +K G L IW+ I Y
Sbjct: 82 FVSSKSNSPPGLL----NVYVKVNNGPLGNPIWNISGDPTRTWNRAELAISTFWPNFYQV 137
Query: 1396 DTTMNSSNSEPGKQSGPVIVEEQPNKPVMDLSGVRDITVKAGEDFSIHVPFMAFPQPA-- 1453
+ +S + V V P ++++ V AG+ + +
Sbjct: 138 IFEVITSGHQGYLAIDEVKVLGHPCTRTPHFLRIQNVEVNAGQFATFQCSAIGRTVAGDR 197
Query: 1454 AFWFANDSIIDDSDTRVHKQLTMNSASLVVKNSQRSDGGQYRLQLKNPAGFDTATLHSRL 1513
+ D AS V N+ + D G+YR ++ G
Sbjct: 198 LWLQGIDVRDAPLKEIKVTSSRRFIASFNVVNTTKRDAGKYRCMIRTEGGVG-------- 249
Query: 1514 RTLPDSVNPRCHLPSSTSKERPKFPTHPNHQPWLKWARASLTSKGVDSTEDSISLVWSKP 1573
S+ ++ K P P P L + + +
Sbjct: 250 -------------ISNYAELVVKEPPVPIAPPQL-----------ASVGATYLWIQLNAN 285
Query: 1574 RHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEGKSIGSERGSTAQFLE 1633
+G PI VE + W
Sbjct: 286 SINGDGPIVAREVEYC-TASGSWN------------------------------------ 308
Query: 1634 REVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNA--IGKSEPS 1681
+ V S+ + +L +YE ++ G P
Sbjct: 309 -----------DRQPVDSTSYKIGHLDPDTEYEISVLLTRPGEGGTGSPG 347
Score = 48.6 bits (115), Expect = 2e-05
Identities = 15/128 (11%), Positives = 37/128 (28%), Gaps = 5/128 (3%)
Query: 1559 VDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEG 1618
++ T+++++++ H G+P+ Y + + K + +
Sbjct: 577 LNQTDNTVTVMLKPA-HSRGAPVSVYQIVVEEERPRRTKKTTE---ILKCYPVPIHFQNA 632
Query: 1619 KSIGSERGSTAQFLEREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKS 1678
+ S+ A+F + A D + L+ Y A +
Sbjct: 633 SLLNSQYYFAAEFPADSLQAAQPFTIGDNKTYN-GYWNTPLLPYKSYRIYFQAASRANGE 691
Query: 1679 EPSICTTP 1686
C
Sbjct: 692 TKIDCVQV 699
Score = 48.2 bits (114), Expect = 3e-05
Identities = 20/179 (11%), Positives = 42/179 (23%), Gaps = 17/179 (9%)
Query: 591 GENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAPYRVV 650
+ V + P W + + A L I V
Sbjct: 91 PGLLNVYVKVNNGPLGNPIWNISGDPTR---------TWNRAELAISTFWPNFYQVIFEV 141
Query: 651 AENDLGMDSAIVKIQISDRPDP-----PQFPTVEDIGHDSLALVWRAPIWDGGSNITNYI 705
+ AI ++++ P + VE A +
Sbjct: 142 ITSGHQGYLAIDEVKVLGHPCTRTPHFLRIQNVEVNAGQFATFQCSAIGRTVAGDRLWLQ 201
Query: 706 VEKREHPMSSWIRVGNTRFTTMA--ITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITT 762
I+V ++R + + + ++R G S ++L+
Sbjct: 202 GIDVRDAPLKEIKVTSSRRFIASFNVVNTTKRDAGKYRCMIRTEGGV-GISNYAELVVK 259
Score = 46.7 bits (110), Expect = 9e-05
Identities = 16/156 (10%), Positives = 31/156 (19%), Gaps = 44/156 (28%)
Query: 277 PGPPIGPLDVSE-ITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHDTT 335
P P L+ T +T T+ P G V+ Y + + +
Sbjct: 566 PSMPAYELETPLNQTDNTVTVMLKPAHSRGA-PVSVYQIVVEEERPRRTKKTTEILKCYP 624
Query: 336 ------------------------------------------FIVQGLTEGQEYLFHVMA 353
+ L + Y + A
Sbjct: 625 VPIHFQNASLLNSQYYFAAEFPADSLQAAQPFTIGDNKTYNGYWNTPLLPYKSYRIYFQA 684
Query: 354 VNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQV 389
+ ++ + + KP P
Sbjct: 685 ASRANGETKIDCVQVATKGAATPKPVPEPEKQTDHT 720
Score = 41.7 bits (97), Expect = 0.003
Identities = 10/55 (18%), Positives = 19/55 (34%), Gaps = 5/55 (9%)
Query: 22 YIIERREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNA--IGKSEPS 74
+E G+ W + V S+ + +L +YE ++ G P
Sbjct: 296 REVEYCTASGS-WN--DRQPVDSTSYKIGHLDPDTEYEISVLLTRPGEGGTGSPG 347
Score = 35.1 bits (80), Expect = 0.28
Identities = 10/61 (16%), Positives = 19/61 (31%), Gaps = 2/61 (3%)
Query: 21 CYIIERREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGK--SEPSICTT 78
Y + D ++ NL + ++I +N G+ S+ I T
Sbjct: 398 HYCYQVGGQEQVREEVSWDTENSHPQHTITNLSPYTNVSVKLILMNPEGRKESQELIVQT 457
Query: 79 P 79
Sbjct: 458 D 458
Score = 31.7 bits (71), Expect = 3.2
Identities = 12/36 (33%), Positives = 13/36 (36%), Gaps = 2/36 (5%)
Query: 46 SFSVLNLVEGNDYEFRIIAVNAIGKSEPS--ICTTP 79
F L G Y F I A A G P+ TT
Sbjct: 527 HFLFFGLYPGTTYSFTIRASTAKGFGPPATNQFTTK 562
>1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A
{Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1
Length = 205
Score = 152 bits (385), Expect = 8e-42
Identities = 42/233 (18%), Positives = 77/233 (33%), Gaps = 39/233 (16%)
Query: 898 VLDRPHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVE-KKDYNSTVWTKVSSYVT 956
V D P+ P+ A D ++W D S I +Y ++ + W V
Sbjct: 2 VQDVPNAPKLTGITCQA-DKAEIHWEQQGD-NRSPILHYTIQFNTSFTPASWDAAYEKVP 59
Query: 957 -TPFVRVRNLAIGSTYEFRVMAENQYGLSKPALTIDPIKAKHPFDVPGAPGAPKGVDSTE 1015
T V ++ + Y FRV+A N+ G S P+ D + P P G +
Sbjct: 60 NTDSSFVVQMSPWANYTFRVIAFNKIGASPPSAHSDSCTTQ-PDVPFKNPDNVVGQGTEP 118
Query: 1016 DSISLVWSK-PRHDGGSPIQRYIVE-KRLISDDKWIKASMAHIPDTSLKYVLWVSEGKSI 1073
+++ + W+ P + +P Y V KR I W ++ ++
Sbjct: 119 NNLVISWTPMPEIEHNAPNFHYYVSWKRDIPAAAWENNNIFDWRQNNI------------ 166
Query: 1074 GSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPWSSSSDII 1126
+ +Y +V A+N G+ ++ +
Sbjct: 167 --------------------VIADQPTFVKYLIKVVAINDRGESNVAAEEVVG 199
Score = 143 bits (363), Expect = 9e-39
Identities = 36/195 (18%), Positives = 68/195 (34%), Gaps = 8/195 (4%)
Query: 275 GLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHW--ICISTTCH 332
+P P +HW D + HY ++ P +
Sbjct: 4 DVPNAPKLT--GITCQADKAEIHWEQQ-GDNRSPILHYTIQFNTSFTPASWDAAYEKVPN 60
Query: 333 DTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGD 392
+ V ++ Y F V+A N+ G PP + + P P V +
Sbjct: 61 TDSSFVVQMSPWANYTFRVIAFNKIGASPPSAHSDSCTTQ-PDVPFKNPDNVVGQGTEPN 119
Query: 393 FVNLSWDK-PLDDGGSRIQGYWID-KHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEF 450
+ +SW P + + Y++ K ++ + AW+ N+ + I I + +Y
Sbjct: 120 NLVISWTPMPEIEHNAPNFHYYVSWKRDIPAAAWENNNIFDWRQNNIVIADQPTFVKYLI 179
Query: 451 RVYAQNEAGLSLPSS 465
+V A N+ G S ++
Sbjct: 180 KVVAINDRGESNVAA 194
Score = 143 bits (363), Expect = 9e-39
Identities = 36/195 (18%), Positives = 68/195 (34%), Gaps = 8/195 (4%)
Query: 1882 GLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHW--ICISTTCH 1939
+P P +HW D + HY ++ P +
Sbjct: 4 DVPNAPKLT--GITCQADKAEIHWEQQ-GDNRSPILHYTIQFNTSFTPASWDAAYEKVPN 60
Query: 1940 DTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGD 1999
+ V ++ Y F V+A N+ G PP + + P P V +
Sbjct: 61 TDSSFVVQMSPWANYTFRVIAFNKIGASPPSAHSDSCTTQ-PDVPFKNPDNVVGQGTEPN 119
Query: 2000 FVNLSWDK-PLDDGGSRIQGYWID-KHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEF 2057
+ +SW P + + Y++ K ++ + AW+ N+ + I I + +Y
Sbjct: 120 NLVISWTPMPEIEHNAPNFHYYVSWKRDIPAAAWENNNIFDWRQNNIVIADQPTFVKYLI 179
Query: 2058 RVYAQNEAGLSLPSS 2072
+V A N+ G S ++
Sbjct: 180 KVVAINDRGESNVAA 194
Score = 115 bits (290), Expect = 5e-29
Identities = 31/144 (21%), Positives = 49/144 (34%), Gaps = 7/144 (4%)
Query: 1227 VVDKPSPPQGPLDVSDITPESCSLSWKPPLDDGGSPITNYVVE-KYESATGFWSKLSSFV 1285
V D P+ P+ + + W+ D SPI +Y ++ W V
Sbjct: 2 VQDVPNAPKLT--GITCQADKAEIHWEQQ-GDNRSPILHYTIQFNTSFTPASWDAAYEKV 58
Query: 1286 -RSPAYDVFGLETNRQYRFRVRAENQYGVSEPLELDNSITAKFPFTVPDPPGQPQIVDWD 1344
+ + V + Y FRV A N+ G S P +S T + P P +
Sbjct: 59 PNTDSSFVVQMSPWANYTFRVIAFNKIGASPPSAHSDSCTTQ-PDVPFKNPDNVVGQGTE 117
Query: 1345 TNNATLMWDR-PRTDGGSKIQGYK 1367
NN + W P + + Y
Sbjct: 118 PNNLVISWTPMPEIEHNAPNFHYY 141
Score = 96.7 bits (241), Expect = 2e-22
Identities = 27/100 (27%), Positives = 39/100 (39%), Gaps = 5/100 (5%)
Query: 668 DRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKRE-HPMSSWIRVGNT--RF 724
D P+ P+ + D + W D S I +Y ++ +SW
Sbjct: 4 DVPNAPKLTGIT-CQADKAEIHWEQQG-DNRSPILHYTIQFNTSFTPASWDAAYEKVPNT 61
Query: 725 TTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKD 764
+ + +SP Y FRV A N G S PS SD TT+
Sbjct: 62 DSSFVVQMSPWANYTFRVIAFNKIGASPPSAHSDSCTTQP 101
Score = 92.5 bits (230), Expect = 5e-21
Identities = 27/111 (24%), Positives = 46/111 (41%), Gaps = 3/111 (2%)
Query: 376 DKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGS-DAWQRVNVAICAP 434
D P+ P + +T D + W++ D S I Y I + + +W +
Sbjct: 4 DVPNAPKLTGIT-CQADKAEIHWEQQ-GDNRSPILHYTIQFNTSFTPASWDAAYEKVPNT 61
Query: 435 SQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIV 485
+ + Y FRV A N+ G S PS+ S+S + + K P+ +V
Sbjct: 62 DSSFVVQMSPWANYTFRVIAFNKIGASPPSAHSDSCTTQPDVPFKNPDNVV 112
Score = 92.5 bits (230), Expect = 5e-21
Identities = 27/111 (24%), Positives = 46/111 (41%), Gaps = 3/111 (2%)
Query: 1983 DKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGS-DAWQRVNVAICAP 2041
D P+ P + +T D + W++ D S I Y I + + +W +
Sbjct: 4 DVPNAPKLTGIT-CQADKAEIHWEQQ-GDNRSPILHYTIQFNTSFTPASWDAAYEKVPNT 61
Query: 2042 SQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIV 2092
+ + Y FRV A N+ G S PS+ S+S + + K P+ +V
Sbjct: 62 DSSFVVQMSPWANYTFRVIAFNKIGASPPSAHSDSCTTQPDVPFKNPDNVV 112
Score = 83.2 bits (206), Expect = 8e-18
Identities = 29/151 (19%), Positives = 40/151 (26%), Gaps = 40/151 (26%)
Query: 1000 DVPGAPGAPKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKR-LISDDKWIKASMAHIPD 1058
DVP AP + D + W + D SPI Y ++ + W A
Sbjct: 4 DVPNAPKLTG-ITCQADKAEIHWE-QQGDNRSPILHYTIQFNTSFTPASWDAAYEKVPNT 61
Query: 1059 TSLKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGP 1118
S V + Y FRV A N G P
Sbjct: 62 DSS--------------------------------FVVQMSPWANYTFRVIAFNKIGASP 89
Query: 1119 WSSSSDIIMCC--APPCAPKITSDLSIRDMT 1147
S+ SD P P ++ +
Sbjct: 90 PSAHSDSCTTQPDVPFKNP---DNVVGQGTE 117
Score = 81.3 bits (201), Expect = 4e-17
Identities = 25/124 (20%), Positives = 46/124 (37%), Gaps = 9/124 (7%)
Query: 648 RVVAENDLGM-----DSAIVKIQISDRPDPPQFPTVEDIGHDSLALVWRA-PIWDGGSNI 701
RV+A N +G S Q P + ++L + W P + +
Sbjct: 78 RVIAFNKIGASPPSAHSDSCTTQPDVPFKNPDNVVGQGTEPNNLVISWTPMPEIEHNAPN 137
Query: 702 TNYIVE-KREHPMSSWIR--VGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSD 758
+Y V KR+ P ++W + + R + I +Y +V A N G S+ +
Sbjct: 138 FHYYVSWKRDIPAAAWENNNIFDWRQNNIVIADQPTFVKYLIKVVAINDRGESNVAAEEV 197
Query: 759 LITT 762
+ +
Sbjct: 198 VGYS 201
Score = 69.4 bits (170), Expect = 5e-13
Identities = 24/135 (17%), Positives = 37/135 (27%), Gaps = 45/135 (33%)
Query: 1559 VDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEG 1618
+ D + W + D SPI Y ++ A+ +P+T
Sbjct: 14 ITCQADKAEIHWE-QQGDNRSPILHYTIQFNTSFTPASWDAAYEKVPNTD---------- 62
Query: 1619 KSIGSERGSTAQFLEREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKS 1678
S V+ + +Y FR+IA N IG S
Sbjct: 63 ----------------------------------SSFVVQMSPWANYTFRVIAFNKIGAS 88
Query: 1679 EPSICTTPVKICEFV 1693
PS + V
Sbjct: 89 PPSAHSDSCTTQPDV 103
Score = 69.0 bits (169), Expect = 7e-13
Identities = 27/111 (24%), Positives = 40/111 (36%), Gaps = 7/111 (6%)
Query: 1213 VNTVG-SD-SASCKVYVVDKPSPPQGPLDVS--DITPESCSLSWKP-PLDDGGSPITNYV 1267
N +G S SA P + P +V P + +SW P P + +P +Y
Sbjct: 82 FNKIGASPPSAHSDSCTTQPDVPFKNPDNVVGQGTEPNNLVISWTPMPEIEHNAPNFHYY 141
Query: 1268 VE-KYESATGFWSKLSSF-VRSPAYDVFGLETNRQYRFRVRAENQYGVSEP 1316
V K + W + F R + T +Y +V A N G S
Sbjct: 142 VSWKRDIPAAAWENNNIFDWRQNNIVIADQPTFVKYLIKVVAINDRGESNV 192
Score = 60.9 bits (148), Expect = 3e-10
Identities = 18/66 (27%), Positives = 25/66 (37%), Gaps = 1/66 (1%)
Query: 22 YIIERREVGG-AIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPSICTTPV 80
Y I+ A W + S V+ + +Y FR+IA N IG S PS +
Sbjct: 38 YTIQFNTSFTPASWDAAYEKVPNTDSSFVVQMSPWANYTFRVIAFNKIGASPPSAHSDSC 97
Query: 81 KICEFV 86
V
Sbjct: 98 TTQPDV 103
Score = 53.6 bits (129), Expect = 1e-07
Identities = 15/126 (11%), Positives = 38/126 (30%), Gaps = 45/126 (35%)
Query: 1557 KGVDSTEDSISLVWSK-PRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWV 1615
G + +++ + W+ P + +P Y V +
Sbjct: 112 VGQGTEPNNLVISWTPMPEIEHNAPNFHYYVSWK-------------------------- 145
Query: 1616 SEGKSIGSERGSTAQFLEREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAI 1675
R++ A W N ++ + + + + Y +++A+N
Sbjct: 146 ------------------RDIPAAAWENNNIFDWRQNNIVIADQPTFVKYLIKVVAINDR 187
Query: 1676 GKSEPS 1681
G+S +
Sbjct: 188 GESNVA 193
Score = 51.6 bits (124), Expect = 4e-07
Identities = 10/54 (18%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Query: 22 YIIE-RREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPS 74
Y + +R++ A W N ++ + + + + Y +++A+N G+S +
Sbjct: 140 YYVSWKRDIPAAAWENNNIFDWRQNNIVIADQPTFVKYLIKVVAINDRGESNVA 193
Score = 38.9 bits (91), Expect = 0.009
Identities = 18/111 (16%), Positives = 33/111 (29%), Gaps = 15/111 (13%)
Query: 1331 VPDPPGQPQIVDWDTNNATLMWDRPRTDGGSKIQGYKMLLKTPTGELPTTIWSKIRPTSS 1390
VP+ P I A + W++ D S I Y + T + P +
Sbjct: 5 VPNAPKLTGITCQADK-AEIHWEQQ-GDNRSPILHYTIQFNTSFTPASWDAAYEKVPNTD 62
Query: 1391 TVYCKDTTMNSS------------NSEPGKQSGPVIVEEQ-PNKPVMDLSG 1428
+ + + ++ S P S + P K ++ G
Sbjct: 63 SSFVVQMSPWANYTFRVIAFNKIGASPPSAHSDSCTTQPDVPFKNPDNVVG 113
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG
B3P; 2.60A {Homo sapiens}
Length = 304
Score = 152 bits (386), Expect = 1e-40
Identities = 57/234 (24%), Positives = 90/234 (38%), Gaps = 16/234 (6%)
Query: 454 AQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTIS 513
AQN G + A +V +D + + P I + + + A C +G P P I+
Sbjct: 83 AQNSVG-EITVHAKLTVLREDQLPSGFPNIDMGPQLKVVERTRTATMLCAASGNPDPEIT 141
Query: 514 WLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVK-STKAELIIM- 571
W K + PSA + + + L I S D +Y C A N GV+ S+ A L +
Sbjct: 142 WFKDFLPVDPSASNGRIKQLRSGALQIESSEETDQGKYECVATNSAGVRYSSPANLYVRV 201
Query: 572 --TAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSE 629
AP+F++ P + G NV + G P P + W + E + V
Sbjct: 202 QNVAPRFSILPMSHEIM---PGGNVNITCVAVGSPMPYVKWMQGAEDLTPEDDMPVGR-- 256
Query: 630 RHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQISDRPDPPQFPTVEDIGH 683
+ D+A Y VA + LG+ A+ +I + P H
Sbjct: 257 ----NVLELTDVKDSANYTCVAMSSLGVIEAVAQITVKSLPKAGTKH--HHHHH 304
Score = 129 bits (326), Expect = 1e-32
Identities = 44/231 (19%), Positives = 80/231 (34%), Gaps = 11/231 (4%)
Query: 59 EFRIIAVNAIGKSEPSICTTPVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTP 118
+ +A N++G+ T V + + P+ + + VV + T+ C A+G P
Sbjct: 78 VYECVAQNSVGEITVHAKLT-VLREDQLPSGFPNIDMGPQLKVVERTRTATMLCAASGNP 136
Query: 119 VPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSS-- 176
P+ W ++ + A L + D G Y C A NS G ++S
Sbjct: 137 DPEITWFKDFLPVDPSASNGRIKQLRSGALQIESSEETDQGKYECVATNSAGVRYSSPAN 196
Query: 177 -RVKIGT-PPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTV 234
V++ PR +P + I G N + G V + + +D
Sbjct: 197 LYVRVQNVAPRFSILPMSHEIMPGGNVNITCVAVGSPMPYVKWMQGAEDLTPEDDMPVGR 256
Query: 235 LDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPIGPLD 285
++ +D+ +YT +S G + I + LP
Sbjct: 257 N------VLELTDVKDSANYTCVAMSSLGVIEAVAQITVKSLPKAGTKHHH 301
Score = 129 bits (326), Expect = 1e-32
Identities = 44/231 (19%), Positives = 80/231 (34%), Gaps = 11/231 (4%)
Query: 1666 EFRIIAVNAIGKSEPSICTTPVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTP 1725
+ +A N++G+ T V + + P+ + + VV + T+ C A+G P
Sbjct: 78 VYECVAQNSVGEITVHAKLT-VLREDQLPSGFPNIDMGPQLKVVERTRTATMLCAASGNP 136
Query: 1726 VPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSS-- 1783
P+ W ++ + A L + D G Y C A NS G ++S
Sbjct: 137 DPEITWFKDFLPVDPSASNGRIKQLRSGALQIESSEETDQGKYECVATNSAGVRYSSPAN 196
Query: 1784 -RVKIGT-PPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTV 1841
V++ PR +P + I G N + G V + + +D
Sbjct: 197 LYVRVQNVAPRFSILPMSHEIMPGGNVNITCVAVGSPMPYVKWMQGAEDLTPEDDMPVGR 256
Query: 1842 LDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPIGPLD 1892
++ +D+ +YT +S G + I + LP
Sbjct: 257 N------VLELTDVKDSANYTCVAMSSLGVIEAVAQITVKSLPKAGTKHHH 301
Score = 127 bits (321), Expect = 4e-32
Identities = 45/204 (22%), Positives = 78/204 (38%), Gaps = 7/204 (3%)
Query: 479 KAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHI-FAEGDTYT 537
+ P I ++ + A F C TG PKP ++W K +++ I F E
Sbjct: 5 EPPRFIKEPKDQIGVSGGVASFVCQATGDPKPRVTWNKKGKKVNSQRFETIEFDESAGAV 64
Query: 538 LIINSVYGV-DADEYVCRAVNKGGVKSTKAELIIMTAPKF-NVPPRFRDT---AYFDKGE 592
L I + D + Y C A N G + A+L ++ + + P ++
Sbjct: 65 LRIQPLRTPRDENVYECVAQNSVGEITVHAKLTVLREDQLPSGFPNIDMGPQLKVVERTR 124
Query: 593 NVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAPYRVVAE 652
+ +G P P+ITW++D ++ R L I + D Y VA
Sbjct: 125 TATMLCAASGNPDPEITWFKDFLPVDPSASNGRIKQLRSGALQIESSEETDQGKYECVAT 184
Query: 653 NDLGM-DSAIVKIQISDRPDPPQF 675
N G+ S+ + + + P+F
Sbjct: 185 NSAGVRYSSPANLYVRVQNVAPRF 208
Score = 115 bits (290), Expect = 6e-28
Identities = 46/223 (20%), Positives = 79/223 (35%), Gaps = 15/223 (6%)
Query: 89 EKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVE-TAGGVFR 147
E P FI KD + G + + C+ATG P P+ W + G++++S +E
Sbjct: 5 EPPRFIKEPKDQIGVSGGVASFVCQATGDPKPRVTWNKKGKKVNSQRFETIEFDESAGAV 64
Query: 148 LHFNEVTDV-DNGDYTCEAYNSVGFAHTSSRVKI-------GTPPRIDRMPNALYIPEGD 199
L + D Y C A NSVG +++ + P ID P +
Sbjct: 65 LRIQPLRTPRDENVYECVAQNSVGEITVHAKLTVLREDQLPSGFPNIDMGPQLKVVERTR 124
Query: 200 NTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFK-FTVLDDYIIIFIKEIRKEDAGDYTVNL 258
+ +G+ E++ K+ V L + I+ + D G Y
Sbjct: 125 TATMLCAASGNPDPEITWFKDFLPVDPSASNGRIKQLRSGALQ-IESSEETDQGKYECVA 183
Query: 259 SNSSGS-VSGTFTINITGLPGPP---IGPLDVSEITKHTCTLH 297
+NS+G S + + P I P+ + +
Sbjct: 184 TNSAGVRYSSPANLYVRVQNVAPRFSILPMSHEIMPGGNVNIT 226
Score = 115 bits (290), Expect = 6e-28
Identities = 46/223 (20%), Positives = 79/223 (35%), Gaps = 15/223 (6%)
Query: 1696 EKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVE-TAGGVFR 1754
E P FI KD + G + + C+ATG P P+ W + G++++S +E
Sbjct: 5 EPPRFIKEPKDQIGVSGGVASFVCQATGDPKPRVTWNKKGKKVNSQRFETIEFDESAGAV 64
Query: 1755 LHFNEVTDV-DNGDYTCEAYNSVGFAHTSSRVKI-------GTPPRIDRMPNALYIPEGD 1806
L + D Y C A NSVG +++ + P ID P +
Sbjct: 65 LRIQPLRTPRDENVYECVAQNSVGEITVHAKLTVLREDQLPSGFPNIDMGPQLKVVERTR 124
Query: 1807 NTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFK-FTVLDDYIIIFIKEIRKEDAGDYTVNL 1865
+ +G+ E++ K+ V L + I+ + D G Y
Sbjct: 125 TATMLCAASGNPDPEITWFKDFLPVDPSASNGRIKQLRSGALQ-IESSEETDQGKYECVA 183
Query: 1866 SNSSGS-VSGTFTINITGLPGPP---IGPLDVSEITKHTCTLH 1904
+NS+G S + + P I P+ + +
Sbjct: 184 TNSAGVRYSSPANLYVRVQNVAPRFSILPMSHEIMPGGNVNIT 226
Score = 100 bits (250), Expect = 1e-22
Identities = 40/149 (26%), Positives = 62/149 (41%), Gaps = 7/149 (4%)
Query: 2061 AQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTIS 2120
AQN G + A +V +D + + P I + + + A C +G P P I+
Sbjct: 83 AQNSVG-EITVHAKLTVLREDQLPSGFPNIDMGPQLKVVERTRTATMLCAASGNPDPEIT 141
Query: 2121 WLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVK-STKAELIIM- 2178
W K + PSA + + + L I S D +Y C A N GV+ S+ A L +
Sbjct: 142 WFKDFLPVDPSASNGRIKQLRSGALQIESSEETDQGKYECVATNSAGVRYSSPANLYVRV 201
Query: 2179 --TAPKFNVPPRFRDTAYFESDVVVVVCV 2205
AP+F++ P V + CV
Sbjct: 202 QNVAPRFSILP--MSHEIMPGGNVNITCV 228
Score = 97.2 bits (242), Expect = 1e-21
Identities = 27/128 (21%), Positives = 51/128 (39%), Gaps = 10/128 (7%)
Query: 2061 AQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTIS 2120
A N AG+ S A+ V+++ AP + + + N C G P P +
Sbjct: 183 ATNSAGVRYSSPANLYVRVQ----NVAPRFSILPMSHEIMPGGNVNITCVAVGSPMPYVK 238
Query: 2121 WLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTA 2180
W++G+ ++TP + ++ D+ Y C A++ GV A++ + +
Sbjct: 239 WMQGAEDLTPEDDMPV------GRNVLELTDVKDSANYTCVAMSSLGVIEAVAQITVKSL 292
Query: 2181 PKFNVPPR 2188
PK
Sbjct: 293 PKAGTKHH 300
Score = 80.3 bits (198), Expect = 6e-16
Identities = 28/121 (23%), Positives = 45/121 (37%), Gaps = 6/121 (4%)
Query: 2086 KAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHI-FAEGDTYT 2144
+ P I ++ + A F C TG PKP ++W K +++ I F E
Sbjct: 5 EPPRFIKEPKDQIGVSGGVASFVCQATGDPKPRVTWNKKGKKVNSQRFETIEFDESAGAV 64
Query: 2145 LIINSVYGV-DADEYVCRAVNKGGVKSTKAELIIMTAPKF-NVPPRFRDTAYFESDVVVV 2202
L I + D + Y C A N G + A+L ++ + + P VV
Sbjct: 65 LRIQPLRTPRDENVYECVAQNSVGEITVHAKLTVLREDQLPSGFPNIDMG---PQLKVVE 121
Query: 2203 V 2203
Sbjct: 122 R 122
Score = 68.7 bits (168), Expect = 4e-12
Identities = 25/133 (18%), Positives = 45/133 (33%), Gaps = 12/133 (9%)
Query: 1108 VC-AVNAAGQGPWSSSSDIIMCCAPPCAPKITSDLSIRDMTVLAGEEFTITVPFSGRPKP 1166
C A N+AG SS + AP+ + ++ G IT G P P
Sbjct: 180 ECVATNSAGV--RYSSPANLYVRVQNVAPRFSILPM--SHEIMPGGNVNITCVAVGSPMP 235
Query: 1167 TPIWTVNGDEVSPDGRIKFETSENQTIYRNKSAKRATDSGSYTIQLVNTVGSDSASCKVY 1226
W ++++P+ + + DS +YT ++++G A ++
Sbjct: 236 YVKWMQGAEDLTPEDDMPVGR---NVL----ELTDVKDSANYTCVAMSSLGVIEAVAQIT 288
Query: 1227 VVDKPSPPQGPLD 1239
V P
Sbjct: 289 VKSLPKAGTKHHH 301
Score = 64.1 bits (156), Expect = 1e-10
Identities = 22/105 (20%), Positives = 40/105 (38%), Gaps = 3/105 (2%)
Query: 1134 APKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQT- 1192
P+ + +D ++G + +G PKP W G +V+ E E+
Sbjct: 6 PPRFIKEP--KDQIGVSGGVASFVCQATGDPKPRVTWNKKGKKVNSQRFETIEFDESAGA 63
Query: 1193 IYRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYVVDKPSPPQGP 1237
+ R + + D Y N+VG + K+ V+ + P G
Sbjct: 64 VLRIQPLRTPRDENVYECVAQNSVGEITVHAKLTVLREDQLPSGF 108
Score = 57.9 bits (140), Expect = 1e-08
Identities = 45/191 (23%), Positives = 66/191 (34%), Gaps = 25/191 (13%)
Query: 1064 VLWVSEGKSIGSERGSTAQFLEL---LLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPWS 1120
V W +GK + S+R T +F E +L P R E + A N+ G+ +
Sbjct: 38 VTWNKKGKKVNSQRFETIEFDESAGAVLRIQPLRTPR----DENVYECVAQNSVGEI--T 91
Query: 1121 SSSDII---MCCAPPCAPKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEV 1177
+ + P P I + V T+ SG P P W + V
Sbjct: 92 VHAKLTVLREDQLPSGFPNIDMGP--QLKVVERTRTATMLCAASGNPDPEITWFKDFLPV 149
Query: 1178 SP---DGRIKFETSENQTIYRNKSAKRATDSGSYTIQLVNTVGS-DSASCKVYVVDKPSP 1233
P +GRIK S I + TD G Y N+ G S+ +YV +
Sbjct: 150 DPSASNGRIKQLRSGALQI----ESSEETDQGKYECVATNSAGVRYSSPANLYVRVQNVA 205
Query: 1234 P---QGPLDVS 1241
P P+
Sbjct: 206 PRFSILPMSHE 216
Score = 49.8 bits (119), Expect = 5e-06
Identities = 25/145 (17%), Positives = 42/145 (28%), Gaps = 28/145 (19%)
Query: 1402 SNSEPGKQSGP--VIVEEQPNKPVMDLSGVRDITVKAGEDFSIHVPFMAFPQPAAFWFAN 1459
+NS + S P + V Q P + G + +I + P P W
Sbjct: 184 TNSAGVRYSSPANLYVRVQNVAPRF-SILPMSHEIMPGGNVNITCVAVGSPMPYVKWMQG 242
Query: 1460 DSIIDDSDTRVHKQLTMNSASLVVKNSQRSDGGQYRLQLKNPAGFDTATLHSRLRTLPDS 1519
+ D M V++ + D Y + G A +++ +
Sbjct: 243 AEDLTPEDD-------MPVGRNVLELTDVKDSANYTCVAMSSLGVIEAV--AQI-----T 288
Query: 1520 VNPRCHLPSSTSKERPKFPTHPNHQ 1544
V K PK T +H
Sbjct: 289 V-----------KSLPKAGTKHHHH 302
Score = 48.3 bits (115), Expect = 2e-05
Identities = 23/116 (19%), Positives = 46/116 (39%), Gaps = 11/116 (9%)
Query: 1410 SGPVIVEEQPNKPVMD---LSGVRDITVKAGEDFSIHVPFMAFPQPAAFWFANDSIIDDS 1466
+ V + P G + V+ ++ P P WF + +D S
Sbjct: 93 HAKLTVLREDQLPSGFPNIDMGPQLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDPS 152
Query: 1467 --DTRVHKQLTMNSASLVVKNSQRSDGGQYRLQLKNPAG---FDTATLHSRLRTLP 1517
+ R+ + + S +L +++S+ +D G+Y N AG A L+ R++ +
Sbjct: 153 ASNGRIKQ---LRSGALQIESSEETDQGKYECVATNSAGVRYSSPANLYVRVQNVA 205
Score = 42.1 bits (99), Expect = 0.002
Identities = 13/80 (16%), Positives = 23/80 (28%), Gaps = 1/80 (1%)
Query: 1430 RDITVKAGEDFSIHVPFMAFPQPAAFWFANDSIIDDSDTRVHKQLTMNSASLVVKNSQR- 1488
+D +G S P+P W ++ + A L ++ +
Sbjct: 14 KDQIGVSGGVASFVCQATGDPKPRVTWNKKGKKVNSQRFETIEFDESAGAVLRIQPLRTP 73
Query: 1489 SDGGQYRLQLKNPAGFDTAT 1508
D Y +N G T
Sbjct: 74 RDENVYECVAQNSVGEITVH 93
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB:
2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Length = 212
Score = 146 bits (369), Expect = 2e-39
Identities = 45/207 (21%), Positives = 69/207 (33%), Gaps = 10/207 (4%)
Query: 479 KAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHI-FAEGDTYT 537
P + + A F C TG P+P I W K ++++ I F +G
Sbjct: 5 TPPRFTRTPVDQTGVSGGVASFICQATGDPRPKIVWNKKGKKVSNQRFEVIEFDDGSGSV 64
Query: 538 LIINSVYGV-DADEYVCRAVNKGGVKSTKAELIIMTAPKF-NVPPRFRD---TAYFDKGE 592
L I + D Y C A N G S L ++ + P ++
Sbjct: 65 LRIQPLRTPRDEAIYECVASNNVGEISVSTRLTVLREDQIPRGFPTIDMGPQLKVVERTR 124
Query: 593 NVVVKIPFTGYPKPKITWYRDNEVI---ESGGHFHVETSERHAILTIRDASNVDTAPYRV 649
+ +G P P+ITW++D + + G SE L I + D Y
Sbjct: 125 TATMLCAASGNPDPEITWFKDFLPVDTSNNNGRIKQLRSESIGALQIEQSEESDQGKYEC 184
Query: 650 VAENDLGMD-SAIVKIQISDRPDPPQF 675
VA N G SA + +
Sbjct: 185 VATNSAGTRYSAPANLYVRGTKHHHHH 211
Score = 126 bits (317), Expect = 1e-32
Identities = 45/202 (22%), Positives = 78/202 (38%), Gaps = 13/202 (6%)
Query: 89 EKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETA-GGVFR 147
P F D G + + C+ATG P PK W + G+++S+ +E G
Sbjct: 5 TPPRFTRTPVDQTGVSGGVASFICQATGDPRPKIVWNKKGKKVSNQRFEVIEFDDGSGSV 64
Query: 148 LHFNEVTDV-DNGDYTCEAYNSVGFAHTSSRVKI-------GTPPRIDRMPNALYIPEGD 199
L + D Y C A N+VG S+R+ + P ID P +
Sbjct: 65 LRIQPLRTPRDEAIYECVASNNVGEISVSTRLTVLREDQIPRGFPTIDMGPQLKVVERTR 124
Query: 200 NTKVKIFYAGDQPMEVSLTKNGRVVQSDD---RFKFTVLDDYIIIFIKEIRKEDAGDYTV 256
+ +G+ E++ K+ V + + R K + + I++ + D G Y
Sbjct: 125 TATMLCAASGNPDPEITWFKDFLPVDTSNNNGRIKQLRSESIGALQIEQSEESDQGKYEC 184
Query: 257 NLSNSSGS-VSGTFTINITGLP 277
+NS+G+ S + + G
Sbjct: 185 VATNSAGTRYSAPANLYVRGTK 206
Score = 126 bits (317), Expect = 1e-32
Identities = 45/202 (22%), Positives = 78/202 (38%), Gaps = 13/202 (6%)
Query: 1696 EKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETA-GGVFR 1754
P F D G + + C+ATG P PK W + G+++S+ +E G
Sbjct: 5 TPPRFTRTPVDQTGVSGGVASFICQATGDPRPKIVWNKKGKKVSNQRFEVIEFDDGSGSV 64
Query: 1755 LHFNEVTDV-DNGDYTCEAYNSVGFAHTSSRVKI-------GTPPRIDRMPNALYIPEGD 1806
L + D Y C A N+VG S+R+ + P ID P +
Sbjct: 65 LRIQPLRTPRDEAIYECVASNNVGEISVSTRLTVLREDQIPRGFPTIDMGPQLKVVERTR 124
Query: 1807 NTKVKIFYAGDQPMEVSLTKNGRVVQSDD---RFKFTVLDDYIIIFIKEIRKEDAGDYTV 1863
+ +G+ E++ K+ V + + R K + + I++ + D G Y
Sbjct: 125 TATMLCAASGNPDPEITWFKDFLPVDTSNNNGRIKQLRSESIGALQIEQSEESDQGKYEC 184
Query: 1864 NLSNSSGS-VSGTFTINITGLP 1884
+NS+G+ S + + G
Sbjct: 185 VATNSAGTRYSAPANLYVRGTK 206
Score = 100 bits (250), Expect = 1e-23
Identities = 29/132 (21%), Positives = 43/132 (32%), Gaps = 5/132 (3%)
Query: 449 EFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCP 508
+ A N G + S +V +D + P I + + + A C +G P
Sbjct: 78 IYECVASNNVG-EISVSTRLTVLREDQIPRGFPTIDMGPQLKVVERTRTATMLCAASGNP 136
Query: 509 KPTISWLKGSREITPS---ARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVK-ST 564
P I+W K + S R L I D +Y C A N G + S
Sbjct: 137 DPEITWFKDFLPVDTSNNNGRIKQLRSESIGALQIEQSEESDQGKYECVATNSAGTRYSA 196
Query: 565 KAELIIMTAPKF 576
A L +
Sbjct: 197 PANLYVRGTKHH 208
Score = 100 bits (250), Expect = 1e-23
Identities = 29/132 (21%), Positives = 43/132 (32%), Gaps = 5/132 (3%)
Query: 2056 EFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCP 2115
+ A N G + S +V +D + P I + + + A C +G P
Sbjct: 78 IYECVASNNVG-EISVSTRLTVLREDQIPRGFPTIDMGPQLKVVERTRTATMLCAASGNP 136
Query: 2116 KPTISWLKGSREITPS---ARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVK-ST 2171
P I+W K + S R L I D +Y C A N G + S
Sbjct: 137 DPEITWFKDFLPVDTSNNNGRIKQLRSESIGALQIEQSEESDQGKYECVATNSAGTRYSA 196
Query: 2172 KAELIIMTAPKF 2183
A L +
Sbjct: 197 PANLYVRGTKHH 208
Score = 96.0 bits (239), Expect = 4e-22
Identities = 26/126 (20%), Positives = 42/126 (33%), Gaps = 7/126 (5%)
Query: 2086 KAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHI-FAEGDTYT 2144
P + + A F C TG P+P I W K ++++ I F +G
Sbjct: 5 TPPRFTRTPVDQTGVSGGVASFICQATGDPRPKIVWNKKGKKVSNQRFEVIEFDDGSGSV 64
Query: 2145 LIINSVYGV-DADEYVCRAVNKGGVKSTKAELIIMTAPKF-NVPPRF----RDTAYFESD 2198
L I + D Y C A N G S L ++ + P + +
Sbjct: 65 LRIQPLRTPRDEAIYECVASNNVGEISVSTRLTVLREDQIPRGFPTIDMGPQLKVVERTR 124
Query: 2199 VVVVVC 2204
++C
Sbjct: 125 TATMLC 130
Score = 94.5 bits (235), Expect = 1e-21
Identities = 33/169 (19%), Positives = 62/169 (36%), Gaps = 20/169 (11%)
Query: 34 WLKCNDYNVLECSFSVLNLVEGNDYEFRI--------------IAVNAIGKSEPSICTTP 79
W K V F V+ +G+ RI +A N +G+ S
Sbjct: 40 WNK-KGKKVSNQRFEVIEFDDGSGSVLRIQPLRTPRDEAIYECVASNNVGEISVS-TRLT 97
Query: 80 VKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREI---SSGAR 136
V + + P + + VV + T+ C A+G P P+ W ++ + ++ R
Sbjct: 98 VLREDQIPRGFPTIDMGPQLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDTSNNNGR 157
Query: 137 YRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSS-RVKIGTPP 184
+ + + L + + D G Y C A NS G +++ + +
Sbjct: 158 IKQLRSESIGALQIEQSEESDQGKYECVATNSAGTRYSAPANLYVRGTK 206
Score = 94.5 bits (235), Expect = 1e-21
Identities = 33/169 (19%), Positives = 62/169 (36%), Gaps = 20/169 (11%)
Query: 1641 WLKCNDYNVLECSFSVLNLVEGNDYEFRI--------------IAVNAIGKSEPSICTTP 1686
W K V F V+ +G+ RI +A N +G+ S
Sbjct: 40 WNK-KGKKVSNQRFEVIEFDDGSGSVLRIQPLRTPRDEAIYECVASNNVGEISVS-TRLT 97
Query: 1687 VKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREI---SSGAR 1743
V + + P + + VV + T+ C A+G P P+ W ++ + ++ R
Sbjct: 98 VLREDQIPRGFPTIDMGPQLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDTSNNNGR 157
Query: 1744 YRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSS-RVKIGTPP 1791
+ + + L + + D G Y C A NS G +++ + +
Sbjct: 158 IKQLRSESIGALQIEQSEESDQGKYECVATNSAGTRYSAPANLYVRGTK 206
Score = 71.0 bits (174), Expect = 1e-13
Identities = 24/105 (22%), Positives = 42/105 (40%), Gaps = 3/105 (2%)
Query: 1134 APKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQ-T 1192
P+ T D T ++G + +G P+P +W G +VS E + +
Sbjct: 6 PPRFTRTPV--DQTGVSGGVASFICQATGDPRPKIVWNKKGKKVSNQRFEVIEFDDGSGS 63
Query: 1193 IYRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYVVDKPSPPQGP 1237
+ R + + D Y N VG S S ++ V+ + P+G
Sbjct: 64 VLRIQPLRTPRDEAIYECVASNNVGEISVSTRLTVLREDQIPRGF 108
Score = 59.8 bits (145), Expect = 1e-09
Identities = 41/185 (22%), Positives = 63/185 (34%), Gaps = 25/185 (13%)
Query: 1064 VLWVSEGKSIGSERGSTAQFLE---LLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPWS 1120
++W +GK + ++R +F + +L P R E + A N G+ S
Sbjct: 38 IVWNKKGKKVSNQRFEVIEFDDGSGSVLRIQPLRT----PRDEAIYECVASNNVGEI--S 91
Query: 1121 SSSDII---MCCAPPCAPKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEV 1177
S+ + P P I + V T+ SG P P W + V
Sbjct: 92 VSTRLTVLREDQIPRGFPTIDMGP--QLKVVERTRTATMLCAASGNPDPEITWFKDFLPV 149
Query: 1178 SPD---GRIKFETSENQ---TIYRNKSAKRATDSGSYTIQLVNTVGSD-SASCKVYVVDK 1230
GRIK SE+ I + +D G Y N+ G+ SA +YV
Sbjct: 150 DTSNNNGRIKQLRSESIGALQIEQ----SEESDQGKYECVATNSAGTRYSAPANLYVRGT 205
Query: 1231 PSPPQ 1235
Sbjct: 206 KHHHH 210
Score = 52.9 bits (127), Expect = 2e-07
Identities = 19/86 (22%), Positives = 36/86 (41%), Gaps = 5/86 (5%)
Query: 1430 RDITVKAGEDFSIHVPFMAFPQPAAFWFANDSIIDDSD--TRVHKQLTMNSASLVVKNSQ 1487
+ V+ ++ P P WF + +D S+ R+ + + + +L ++ S+
Sbjct: 116 QLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDTSNNNGRIKQLRSESIGALQIEQSE 175
Query: 1488 RSDGGQYRLQLKNPAGFD---TATLH 1510
SD G+Y N AG A L+
Sbjct: 176 ESDQGKYECVATNSAGTRYSAPANLY 201
Score = 48.7 bits (116), Expect = 5e-06
Identities = 21/104 (20%), Positives = 32/104 (30%), Gaps = 2/104 (1%)
Query: 182 TPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDD--YI 239
TPPR R P G GD ++ K G+ V + D +
Sbjct: 5 TPPRFTRTPVDQTGVSGGVASFICQATGDPRPKIVWNKKGKKVSNQRFEVIEFDDGSGSV 64
Query: 240 IIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPIGP 283
+ D Y SN+ G +S + + + P G
Sbjct: 65 LRIQPLRTPRDEAIYECVASNNVGEISVSTRLTVLREDQIPRGF 108
Score = 48.7 bits (116), Expect = 5e-06
Identities = 21/104 (20%), Positives = 32/104 (30%), Gaps = 2/104 (1%)
Query: 1789 TPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDD--YI 1846
TPPR R P G GD ++ K G+ V + D +
Sbjct: 5 TPPRFTRTPVDQTGVSGGVASFICQATGDPRPKIVWNKKGKKVSNQRFEVIEFDDGSGSV 64
Query: 1847 IIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPIGP 1890
+ D Y SN+ G +S + + + P G
Sbjct: 65 LRIQPLRTPRDEAIYECVASNNVGEISVSTRLTVLREDQIPRGF 108
Score = 42.9 bits (101), Expect = 4e-04
Identities = 13/80 (16%), Positives = 25/80 (31%), Gaps = 1/80 (1%)
Query: 1430 RDITVKAGEDFSIHVPFMAFPQPAAFWFANDSIIDDSDTRVHKQLTMNSASLVVKNSQR- 1488
D T +G S P+P W + + V + + + L ++ +
Sbjct: 14 VDQTGVSGGVASFICQATGDPRPKIVWNKKGKKVSNQRFEVIEFDDGSGSVLRIQPLRTP 73
Query: 1489 SDGGQYRLQLKNPAGFDTAT 1508
D Y N G + +
Sbjct: 74 RDEAIYECVASNNVGEISVS 93
>3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A
{Homo sapiens} PDB: 1fnh_A
Length = 290
Score = 148 bits (374), Expect = 3e-39
Identities = 39/211 (18%), Positives = 71/211 (33%), Gaps = 15/211 (7%)
Query: 258 LSNSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERR 317
+++ S + G P L +++T + + W PP +T Y V
Sbjct: 1 MAHHHHHHSSGLEVLFQGPAIPAPTDLKFTQVTPTSLSAQWTPPNVQ----LTGYRVRVT 56
Query: 318 DISMPHWI-CISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYD 376
+ I+ ++ +V GL +Y V A+ + P +G+ + +
Sbjct: 57 PKEKTGPMKEINLAPDSSSVVVSGLMVATKYEVSVYALKDTLTSRPAQGV-----VTTLE 111
Query: 377 KPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQ 436
SPP VT + +SW + I G+ +D + + S
Sbjct: 112 NVSPPRRARVTDATETTITISWRTKTET----ITGFQVDAVPANGQTPIQRTIKPDVRS- 166
Query: 437 INIPNLIEGRQYEFRVYAQNEAGLSLPSSAS 467
I L G Y+ +Y N+ S P
Sbjct: 167 YTITGLQPGTDYKIYLYTLNDNARSSPVVID 197
Score = 148 bits (374), Expect = 3e-39
Identities = 39/211 (18%), Positives = 71/211 (33%), Gaps = 15/211 (7%)
Query: 1865 LSNSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERR 1924
+++ S + G P L +++T + + W PP +T Y V
Sbjct: 1 MAHHHHHHSSGLEVLFQGPAIPAPTDLKFTQVTPTSLSAQWTPPNVQ----LTGYRVRVT 56
Query: 1925 DISMPHWI-CISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYD 1983
+ I+ ++ +V GL +Y V A+ + P +G+ + +
Sbjct: 57 PKEKTGPMKEINLAPDSSSVVVSGLMVATKYEVSVYALKDTLTSRPAQGV-----VTTLE 111
Query: 1984 KPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQ 2043
SPP VT + +SW + I G+ +D + + S
Sbjct: 112 NVSPPRRARVTDATETTITISWRTKTET----ITGFQVDAVPANGQTPIQRTIKPDVRS- 166
Query: 2044 INIPNLIEGRQYEFRVYAQNEAGLSLPSSAS 2074
I L G Y+ +Y N+ S P
Sbjct: 167 YTITGLQPGTDYKIYLYTLNDNARSSPVVID 197
Score = 133 bits (336), Expect = 3e-34
Identities = 40/217 (18%), Positives = 71/217 (32%), Gaps = 19/217 (8%)
Query: 254 YTVNLS--NSSG-SVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVT 310
Y V++ + S + PP V++ T+ T T+ W +T
Sbjct: 87 YEVSVYALKDTLTSRPAQGVVTTLENVSPP-RRARVTDATETTITISWRTKTET----IT 141
Query: 311 HYVVERRDISMPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIK 370
+ V+ + I + ++ + GL G +Y ++ +N+N P+
Sbjct: 142 GFQVDAVPANGQTPIQRTIKPDVRSYTITGLQPGTDYKIYLYTLNDNARSSPVVI----- 196
Query: 371 AKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVA 430
P + + +SW P +RI GY I + GS + V
Sbjct: 197 --DASTAIDAPSNLRFLATTPNSLLVSWQPP----RARITGYIIKYEKPGSPPREVVPRP 250
Query: 431 ICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSAS 467
++ I L G +Y V A S P
Sbjct: 251 RPGVTEATITGLEPGTEYTIYVIALKNNQKSEPLIGR 287
Score = 133 bits (336), Expect = 3e-34
Identities = 40/217 (18%), Positives = 71/217 (32%), Gaps = 19/217 (8%)
Query: 1861 YTVNLS--NSSG-SVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVT 1917
Y V++ + S + PP V++ T+ T T+ W +T
Sbjct: 87 YEVSVYALKDTLTSRPAQGVVTTLENVSPP-RRARVTDATETTITISWRTKTET----IT 141
Query: 1918 HYVVERRDISMPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIK 1977
+ V+ + I + ++ + GL G +Y ++ +N+N P+
Sbjct: 142 GFQVDAVPANGQTPIQRTIKPDVRSYTITGLQPGTDYKIYLYTLNDNARSSPVVI----- 196
Query: 1978 AKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVA 2037
P + + +SW P +RI GY I + GS + V
Sbjct: 197 --DASTAIDAPSNLRFLATTPNSLLVSWQPP----RARITGYIIKYEKPGSPPREVVPRP 250
Query: 2038 ICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSAS 2074
++ I L G +Y V A S P
Sbjct: 251 RPGVTEATITGLEPGTEYTIYVIALKNNQKSEPLIGR 287
Score = 122 bits (307), Expect = 2e-30
Identities = 67/349 (19%), Positives = 103/349 (29%), Gaps = 70/349 (20%)
Query: 976 MAENQYGLSKPALTIDPIKAKHPFDVPGAPGAPKGVDSTEDSISLVWSKPRHDGGSPIQR 1035
MA + + S ++ AP K T S+S W+ P +
Sbjct: 1 MAHHHHHHS------SGLEVLFQGPAIPAPTDLKFTQVTPTSLSAQWTPP----NVQLTG 50
Query: 1036 YIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRV 1095
Y V +K +S+ V
Sbjct: 51 YRVRVTPKEKTGPMKEINLAPDSSSVV--------------------------------V 78
Query: 1096 TSLIENHEYEFRVCAVNAAGQGPWSSSSDIIMCCAPPCAPKITSDLSIRDMTVLAGEEFT 1155
+ L+ +YE V A+ + P + D T E T
Sbjct: 79 SGLMVATKYEVSVYALKDTLTSRPAQGVVTT--LENVSPP---RRARVTDAT-----ETT 128
Query: 1156 ITVPFSGRPKPTPI--WTVNGDEVSPDGRIKFETSENQTIYRNKSAKRATDSGSYTIQL- 1212
IT+ S R K I + V+ + I+ + Y + TD Y I L
Sbjct: 129 ITI--SWRTKTETITGFQVDAVPANGQTPIQRTIKPDVRSYTITGLQPGTD---YKIYLY 183
Query: 1213 -VNTVGSDSASCKVYVVDKPSPPQGPLDVSDITPESCSLSWKPPLDDGGSPITNYVVEKY 1271
+N S+ + P L TP S +SW+PP + IT Y+++ Y
Sbjct: 184 TLNDNAR-SSPVVIDASTAIDAPSN-LRFLATTPNSLLVSWQPP----RARITGYIIK-Y 236
Query: 1272 ESATGFWSKLSSFVRSPA--YDVFGLETNRQYRFRVRAENQYGVSEPLE 1318
E ++ R + GLE +Y V A SEPL
Sbjct: 237 EKPGSPPREVVPRPRPGVTEATITGLEPGTEYTIYVIALKNNQKSEPLI 285
Score = 119 bits (301), Expect = 1e-29
Identities = 44/245 (17%), Positives = 72/245 (29%), Gaps = 54/245 (22%)
Query: 904 PPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTKVSSY-VTTPFVRV 962
P +L + SL+ WTPP ++T Y V T K + + V V
Sbjct: 23 APTDLKFTQVTPTSLSAQWTPP----NVQLTGYRVRVTPKEKTGPMKEINLAPDSSSVVV 78
Query: 963 RNLAIGSTYEFRVMAENQYGLSKPALTIDPIKAKHPFDVPGAPGAPKGVDSTEDSISLVW 1022
L + + YE V A S+PA + + P + D+TE +I++ W
Sbjct: 79 SGLMVATKYEVSVYALKDTLTSRPAQGV-----VTTLENVSPPRRARVTDATETTITISW 133
Query: 1023 SKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEGKSIGSERGSTAQ 1082
I + V+ + I+ I Y
Sbjct: 134 RTKT----ETITGFQVDAVPANGQTPIQ---RTIKPDVRSYT------------------ 168
Query: 1083 FLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPWSSSSDIIMCCAPPCAPKITSDLS 1142
+T L +Y+ + +N + I AP S+L
Sbjct: 169 ------------ITGLQPGTDYKIYLYTLNDNARSSPVV----IDASTAIDAP---SNLR 209
Query: 1143 IRDMT 1147
T
Sbjct: 210 FLATT 214
Score = 119 bits (300), Expect = 2e-29
Identities = 36/180 (20%), Positives = 55/180 (30%), Gaps = 14/180 (7%)
Query: 1214 NTVGSDSASCKVYVVDKPSPPQGPLDVSDITPESCSLSWKPPLDDGGSPITNYVVEKYES 1273
+ S+ +V P L + +TP S S W PP +T Y V
Sbjct: 3 HHHHHHSSGLEVLFQGPAIPAPTDLKFTQVTPTSLSAQWTPP----NVQLTGYRVRVTPK 58
Query: 1274 ATGFWSKLSSF-VRSPAYDVFGLETNRQYRFRVRAENQYGVSEPLELDNSITAKFPFTVP 1332
K + S + V GL +Y V A S P +
Sbjct: 59 EKTGPMKEINLAPDSSSVVVSGLMVATKYEVSVYALKDTLTSRPAQ-----GVVTTLENV 113
Query: 1333 DPPGQPQIVDWDTNNATLMWDRPRTDGGSKIQGYKMLLKTPTGELPTTIWSKIRPTSSTV 1392
PP + ++ D T+ W I G+++ G+ P K S T+
Sbjct: 114 SPPRRARVTDATETTITISWRTKT----ETITGFQVDAVPANGQTPIQRTIKPDVRSYTI 169
Score = 118 bits (297), Expect = 5e-29
Identities = 32/225 (14%), Positives = 59/225 (26%), Gaps = 47/225 (20%)
Query: 899 LDRPHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTKVSSYVTTP 958
L+ PP + ++T+ W + IT + V+ N + +
Sbjct: 110 LENVSPPRRARVTDATETTITISWRTKTET----ITGFQVDAVPANGQTPIQRTIKPDVR 165
Query: 959 FVRVRNLAIGSTYEFRVMAENQYGLSKPALTIDPIKAKHPFDVPGAPGAPKGVDSTEDSI 1018
+ L G+ Y+ + N S P + AP + + +T +S+
Sbjct: 166 SYTITGLQPGTDYKIYLYTLNDNARSSPVVI-------DASTAIDAPSNLRFLATTPNSL 218
Query: 1019 SLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEGKSIGSERG 1078
+ W PR + I YI++ T
Sbjct: 219 LVSWQPPR----ARITGYIIKYEKPGSPPREVVPRPRPGVTEAT---------------- 258
Query: 1079 STAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPWSSSS 1123
+T L EY V A+ +
Sbjct: 259 ----------------ITGLEPGTEYTIYVIALKNNQKSEPLIGR 287
Score = 98.3 bits (245), Expect = 3e-22
Identities = 39/219 (17%), Positives = 75/219 (34%), Gaps = 24/219 (10%)
Query: 1182 RIKFETSENQTIYRNKSAKRATDSG-----SYTIQL--VNTVG-SDSASCKVYVVDKPSP 1233
K +T + I + SG Y + + + S A V ++ SP
Sbjct: 56 TPKEKTGPMKEINLAPDSSSVVVSGLMVATKYEVSVYALKDTLTSRPAQGVVTTLENVSP 115
Query: 1234 PQGPLDVSDITPESCSLSWKPPLDDGGSPITNYVVEKYESATGFWSKLSSFVRSPAYDVF 1293
P+ V+D T + ++SW+ IT + V+ + + + +Y +
Sbjct: 116 PRR-ARVTDATETTITISWRTK----TETITGFQVDAVPANGQTPIQRTIKPDVRSYTIT 170
Query: 1294 GLETNRQYRFRVRAENQYGVSEPLELDNSITAKFPFTVPDPPGQPQIVDWDTNNATLMWD 1353
GL+ Y+ + N S P+ +D T D P + + N+ + W
Sbjct: 171 GLQPGTDYKIYLYTLNDNARSSPVVID-------ASTAIDAPSNLRFLATTPNSLLVSWQ 223
Query: 1354 RPRTDGGSKIQGYKMLLKTPTGELPTTIWSKIRPTSSTV 1392
PR ++I GY + + P + +
Sbjct: 224 PPR----ARITGYIIKYEKPGSPPREVVPRPRPGVTEAT 258
Score = 88.7 bits (220), Expect = 6e-19
Identities = 26/112 (23%), Positives = 39/112 (34%), Gaps = 6/112 (5%)
Query: 648 RVVAENDLGM-DSAIVKIQISDRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIV 706
V A D A + + PP+ V D ++ + WR IT + V
Sbjct: 90 SVYALKDTLTSRPAQGVVTTLENVSPPRRARVTDATETTITISWRTK----TETITGFQV 145
Query: 707 EKREHPMSSWIRVG-NTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTS 757
+ + I+ + ITGL PG Y+ +Y N RS P
Sbjct: 146 DAVPANGQTPIQRTIKPDVRSYTITGLQPGTDYKIYLYTLNDNARSSPVVID 197
Score = 86.8 bits (215), Expect = 2e-18
Identities = 29/118 (24%), Positives = 42/118 (35%), Gaps = 9/118 (7%)
Query: 647 YRVVAENDLGMDSAIVKIQISDRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIV 706
+ ND S+ V I S D P +SL + W+ P + IT YI+
Sbjct: 180 IYLYTLNDNA-RSSPVVIDASTAIDAPSNLRFLATTPNSLLVSWQPP----RARITGYII 234
Query: 707 EKREHPMSSW--IRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITT 762
+ + + T ITGL PG +Y V A +S+P T
Sbjct: 235 KYEKPGSPPREVVPRPRPGVTEATITGLEPGTEYTIYVIALKNNQKSEPLIGR--KKT 290
Score = 85.2 bits (211), Expect = 8e-18
Identities = 20/115 (17%), Positives = 37/115 (32%), Gaps = 6/115 (5%)
Query: 650 VAENDLGMDSAIVKIQISDRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKR 709
+A + S + + P + SL+ W P +T Y V
Sbjct: 1 MAHHHHHHSSGLEVLFQGPAIPAPTDLKFTQVTPTSLSAQWTPP----NVQLTGYRVRVT 56
Query: 710 EHPMSSWIRVGN--TRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITT 762
+ ++ N +++ ++GL +YE VYA S P+
Sbjct: 57 PKEKTGPMKEINLAPDSSSVVVSGLMVATKYEVSVYALKDTLTSRPAQGVVTTLE 111
Score = 74.4 bits (183), Expect = 4e-14
Identities = 39/219 (17%), Positives = 67/219 (30%), Gaps = 43/219 (19%)
Query: 165 AYNSVGFAHTSSRVKIGT----PPR----IDRMPNALYI----PEGDNTKVKIFYA---G 209
A + + V PPR D + I T ++ G
Sbjct: 93 ALKDTLTSRPAQGVVTTLENVSPPRRARVTDATETTITISWRTKTETITGFQVDAVPANG 152
Query: 210 DQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLS--NSSGSVSG 267
P++ ++ + R T DY + L N + S
Sbjct: 153 QTPIQRTIKPDVRSYTITGLQPGT-------------------DYKIYLYTLNDNA-RSS 192
Query: 268 TFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHW-IC 326
I+ + P L T ++ + W PP+ ++T Y+++ P +
Sbjct: 193 PVVIDASTAIDAP-SNLRFLATTPNSLLVSWQPPRA----RITGYIIKYEKPGSPPREVV 247
Query: 327 ISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEG 365
T + GL G EY +V+A+ N PL G
Sbjct: 248 PRPRPGVTEATITGLEPGTEYTIYVIALKNNQKSEPLIG 286
Score = 74.4 bits (183), Expect = 4e-14
Identities = 39/219 (17%), Positives = 67/219 (30%), Gaps = 43/219 (19%)
Query: 1772 AYNSVGFAHTSSRVKIGT----PPR----IDRMPNALYI----PEGDNTKVKIFYA---G 1816
A + + V PPR D + I T ++ G
Sbjct: 93 ALKDTLTSRPAQGVVTTLENVSPPRRARVTDATETTITISWRTKTETITGFQVDAVPANG 152
Query: 1817 DQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLS--NSSGSVSG 1874
P++ ++ + R T DY + L N + S
Sbjct: 153 QTPIQRTIKPDVRSYTITGLQPGT-------------------DYKIYLYTLNDNA-RSS 192
Query: 1875 TFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHW-IC 1933
I+ + P L T ++ + W PP+ ++T Y+++ P +
Sbjct: 193 PVVIDASTAIDAP-SNLRFLATTPNSLLVSWQPPRA----RITGYIIKYEKPGSPPREVV 247
Query: 1934 ISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEG 1972
T + GL G EY +V+A+ N PL G
Sbjct: 248 PRPRPGVTEATITGLEPGTEYTIYVIALKNNQKSEPLIG 286
Score = 54.0 bits (130), Expect = 2e-07
Identities = 10/55 (18%), Positives = 17/55 (30%)
Query: 20 DCYIIERREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPS 74
Y + +K + S V L+ YE + A+ S P+
Sbjct: 49 TGYRVRVTPKEKTGPMKEINLAPDSSSVVVSGLMVATKYEVSVYALKDTLTSRPA 103
Score = 53.6 bits (129), Expect = 3e-07
Identities = 14/57 (24%), Positives = 21/57 (36%)
Query: 22 YIIERREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPSICTT 78
YII+ + G ++ L G +Y +IA+ KSEP I
Sbjct: 232 YIIKYEKPGSPPREVVPRPRPGVTEATITGLEPGTEYTIYVIALKNNQKSEPLIGRK 288
Score = 50.2 bits (120), Expect = 3e-06
Identities = 22/172 (12%), Positives = 41/172 (23%), Gaps = 50/172 (29%)
Query: 1560 DSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSL---------K 1610
T S+S W+ P + Y V +K +S+ K
Sbjct: 31 QVTPTSLSAQWTPP----NVQLTGYRVRVTPKEKTGPMKEINLAPDSSSVVVSGLMVATK 86
Query: 1611 YVLWVSEGKSIGSERGSTAQF-------------------------------------LE 1633
Y + V K + R + ++
Sbjct: 87 YEVSVYALKDTLTSRPAQGVVTTLENVSPPRRARVTDATETTITISWRTKTETITGFQVD 146
Query: 1634 REVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPSICTT 1685
S+++ L G DY+ + +N +S P +
Sbjct: 147 AVPANGQTPIQRTIKPDVRSYTITGLQPGTDYKIYLYTLNDNARSSPVVIDA 198
Score = 49.0 bits (117), Expect = 7e-06
Identities = 19/127 (14%), Positives = 33/127 (25%), Gaps = 49/127 (38%)
Query: 1559 VDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEG 1618
+ +T +S+ + W PR + I YI++
Sbjct: 211 LATTPNSLLVSWQPPR----ARITGYIIKYE----------------------------- 237
Query: 1619 KSIGSERGSTAQFLEREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKS 1678
+ G ++ L G +Y +IA+ KS
Sbjct: 238 ----------------KPGSPPREVVPRPRPGVTEATITGLEPGTEYTIYVIALKNNQKS 281
Query: 1679 EPSICTT 1685
EP I
Sbjct: 282 EPLIGRK 288
Score = 47.9 bits (114), Expect = 2e-05
Identities = 9/57 (15%), Positives = 20/57 (35%), Gaps = 1/57 (1%)
Query: 22 YIIERREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPSICTT 78
+ ++ G S+++ L G DY+ + +N +S P +
Sbjct: 143 FQVDAVPANGQTP-IQRTIKPDVRSYTITGLQPGTDYKIYLYTLNDNARSSPVVIDA 198
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane,
phosphorylation, immunoglobulin domain, membrane,
glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Length = 192
Score = 143 bits (363), Expect = 5e-39
Identities = 49/196 (25%), Positives = 79/196 (40%), Gaps = 15/196 (7%)
Query: 480 APEIIVPLR--NANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYT 537
P I +P + NA A + F C +G P+P ISW + + I + ++ + +G
Sbjct: 2 MPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYIL--KGSNTE 59
Query: 538 LIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVK 597
L + ++ D YVCRA NK G +A L + P +T Y + V +
Sbjct: 60 LTVRNIINSDGGPYVCRATNKAGEDEKQAFLQVFVQPHIIQLK--NETTY--ENGQVTLV 115
Query: 598 IPFTGYPKPKITWYRDNEVIE-------SGGHFHVETSERHAILTIRDASNVDTAPYRVV 650
G P P+ITW R + G V+ + L I+D D+ Y
Sbjct: 116 CDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDSGRYDCE 175
Query: 651 AENDLGMDSAIVKIQI 666
A + +G + + I
Sbjct: 176 AASRIGGHQKSMYLDI 191
Score = 126 bits (318), Expect = 5e-33
Identities = 39/192 (20%), Positives = 74/192 (38%), Gaps = 12/192 (6%)
Query: 91 PDFIVPLK--DLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRL 148
P +P K + G+ +T C A+G+P P W RNG+ I +Y ++ + L
Sbjct: 3 PAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILKGSNTE--L 60
Query: 149 HFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYA 208
+ + D G Y C A N G + +++ P I ++ N E +
Sbjct: 61 TVRNIINSDGGPYVCRATNKAGEDEKQAFLQVFVQPHIIQLKN-ETTYENGQVTLVCDAE 119
Query: 209 GDQPMEVSLTKNGRVVQ-------SDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNS 261
G+ E++ + D R + + IK+++ D+G Y ++
Sbjct: 120 GEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDSGRYDCEAASR 179
Query: 262 SGSVSGTFTINI 273
G + ++I
Sbjct: 180 IGGHQKSMYLDI 191
Score = 126 bits (318), Expect = 5e-33
Identities = 39/192 (20%), Positives = 74/192 (38%), Gaps = 12/192 (6%)
Query: 1698 PDFIVPLK--DLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRL 1755
P +P K + G+ +T C A+G+P P W RNG+ I +Y ++ + L
Sbjct: 3 PAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILKGSNTE--L 60
Query: 1756 HFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYA 1815
+ + D G Y C A N G + +++ P I ++ N E +
Sbjct: 61 TVRNIINSDGGPYVCRATNKAGEDEKQAFLQVFVQPHIIQLKN-ETTYENGQVTLVCDAE 119
Query: 1816 GDQPMEVSLTKNGRVVQ-------SDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNS 1868
G+ E++ + D R + + IK+++ D+G Y ++
Sbjct: 120 GEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDSGRYDCEAASR 179
Query: 1869 SGSVSGTFTINI 1880
G + ++I
Sbjct: 180 IGGHQKSMYLDI 191
Score = 97.2 bits (242), Expect = 7e-23
Identities = 35/120 (29%), Positives = 55/120 (45%), Gaps = 7/120 (5%)
Query: 2087 APEIIVPLR--NANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYT 2144
P I +P + NA A + F C +G P+P ISW + + I + ++ + +G
Sbjct: 2 MPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYIL--KGSNTE 59
Query: 2145 LIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPRFRDTAYFESDVVVVVC 2204
L + ++ D YVCRA NK G +A L + P +T Y E+ V +VC
Sbjct: 60 LTVRNIINSDGGPYVCRATNKAGEDEKQAFLQVFVQPHIIQLK--NETTY-ENGQVTLVC 116
Score = 82.9 bits (205), Expect = 8e-18
Identities = 29/124 (23%), Positives = 43/124 (34%), Gaps = 16/124 (12%)
Query: 2061 AQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTIS 2120
A N+AG A V + P II +N +N C G P P I+
Sbjct: 77 ATNKAG-EDEKQAFLQVFV-------QPHIIQL-KNETTYENGQVTLVCDAEGEPIPEIT 127
Query: 2121 WLKGSREITPS-------ARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKA 2173
W + T + R + + + +L I V D+ Y C A ++ G
Sbjct: 128 WKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDSGRYDCEAASRIGGHQKSM 187
Query: 2174 ELII 2177
L I
Sbjct: 188 YLDI 191
Score = 72.5 bits (178), Expect = 3e-14
Identities = 26/99 (26%), Positives = 49/99 (49%), Gaps = 3/99 (3%)
Query: 572 TAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSERH 631
+ P ++P + + ++GE + +G P+P I+W+R+ ++IE + ++ S
Sbjct: 1 SMPAISMPQKSFNA-TAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILKGSNTE 59
Query: 632 AILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQISDRP 670
LT+R+ N D PY A N G D +Q+ +P
Sbjct: 60 --LTVRNIINSDGGPYVCRATNKAGEDEKQAFLQVFVQP 96
Score = 67.1 bits (164), Expect = 2e-12
Identities = 24/100 (24%), Positives = 40/100 (40%), Gaps = 5/100 (5%)
Query: 1134 APKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQ-T 1192
P I+ + T GEE T + SG P+P W NG + + + + S + T
Sbjct: 2 MPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILKGSNTELT 61
Query: 1193 IYRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYVVDKPS 1232
+ ++ +D G Y + N G D + V +P
Sbjct: 62 V---RNIIN-SDGGPYVCRATNKAGEDEKQAFLQVFVQPH 97
Score = 52.9 bits (127), Expect = 2e-07
Identities = 22/101 (21%), Positives = 36/101 (35%), Gaps = 11/101 (10%)
Query: 1134 APKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEV-------SPDGRIKFE 1186
P I +++ T + T+ G P P W D S DGRI+ +
Sbjct: 95 QPHIIQ---LKNETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVK 151
Query: 1187 TSENQTIYRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYV 1227
+ K K +DSG Y + + +G S + +
Sbjct: 152 GQHGSSSLHIKDVKL-SDSGRYDCEAASRIGGHQKSMYLDI 191
Score = 48.7 bits (116), Expect = 4e-06
Identities = 14/98 (14%), Positives = 36/98 (36%), Gaps = 4/98 (4%)
Query: 182 TPPRI--DRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYI 239
+ P I + G+ +G +S +NG++++ ++++ + +
Sbjct: 1 SMPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILKGSNTEL 60
Query: 240 IIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLP 277
+ + I D G Y +N +G + + P
Sbjct: 61 TV--RNIINSDGGPYVCRATNKAGEDEKQAFLQVFVQP 96
Score = 48.7 bits (116), Expect = 4e-06
Identities = 14/98 (14%), Positives = 36/98 (36%), Gaps = 4/98 (4%)
Query: 1789 TPPRI--DRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYI 1846
+ P I + G+ +G +S +NG++++ ++++ + +
Sbjct: 1 SMPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILKGSNTEL 60
Query: 1847 IIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLP 1884
+ + I D G Y +N +G + + P
Sbjct: 61 TV--RNIINSDGGPYVCRATNKAGEDEKQAFLQVFVQP 96
Score = 48.3 bits (115), Expect = 5e-06
Identities = 15/87 (17%), Positives = 32/87 (36%), Gaps = 6/87 (6%)
Query: 1430 RDITVKAGEDFSIHVPFMAFPQPAAFWFANDSIIDDS------DTRVHKQLTMNSASLVV 1483
++ T ++ P P W + D R+ + S+SL +
Sbjct: 102 KNETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHI 161
Query: 1484 KNSQRSDGGQYRLQLKNPAGFDTATLH 1510
K+ + SD G+Y + + G +++
Sbjct: 162 KDVKLSDSGRYDCEAASRIGGHQKSMY 188
Score = 47.5 bits (113), Expect = 1e-05
Identities = 23/97 (23%), Positives = 41/97 (42%), Gaps = 13/97 (13%)
Query: 1412 PVIVEEQPNKPVMDLSGVRDITVKAGEDFSIHVPFMAFPQPAAFWFANDSIIDDSDTRVH 1471
+ + ++ + T + GE+ + P+PA WF N +I++++
Sbjct: 4 AISMPQKS----------FNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKY-- 51
Query: 1472 KQLTMNSASLVVKNSQRSDGGQYRLQLKNPAGFDTAT 1508
L ++ L V+N SDGG Y + N AG D
Sbjct: 52 -ILKGSNTELTVRNIINSDGGPYVCRATNKAGEDEKQ 87
>1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A
{Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB:
1mfn_A 2mfn_A 2ck2_A
Length = 368
Score = 149 bits (378), Expect = 5e-39
Identities = 64/445 (14%), Positives = 115/445 (25%), Gaps = 99/445 (22%)
Query: 902 PHPPENLHADEFAG-DSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTKVSSYV--TTP 958
PP NLH + LT+ W +IT Y + N + V
Sbjct: 2 LSPPTNLHLEANPDTGVLTVSWERSTT---PDITGYRITTTPTNGQQGNSLEEVVHADQS 58
Query: 959 FVRVRNLAIGSTYEFRVMAENQYGLSKPALTIDPIKAKHPFDVPGAPGAPKGVDSTEDSI 1018
NL+ G Y V S P P + + D++
Sbjct: 59 SCTFDNLSPGLEYNVSVYTVKDDKESVPISDT-------IIPAVPPPTDLRFTNIGPDTM 111
Query: 1019 SLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEGKSIGSERG 1078
+ W+ P + ++V + +++ + D ++
Sbjct: 112 RVTWAPPP---SIDLTNFLVRYSPVKNEEDVAELSISPSDNAV----------------- 151
Query: 1079 STAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPWSSSSDIIMCCAPPCAPKIT 1138
+T+L+ EY V +V + +P
Sbjct: 152 ---------------VLTNLLPGTEYVVSVSSVYEQHESTPLRGRQK----TGLDSP--- 189
Query: 1139 SDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRI---------KFETSE 1189
+ + D+T + TV W +P I + +
Sbjct: 190 TGIDFSDIT-----ANSFTV----------HWI------APRATITGYRIRHHPEHFSGR 228
Query: 1190 NQTIYRNKSAKRATDSG-----SYTIQL--VNTVGSDSASCKVYVVDKPSPPQGPLDVSD 1242
+ S T + Y + + +N P+ L+V
Sbjct: 229 PREDRVPHSRNSITLTNLTPGTEYVVSIVALNGREESPLLIGQ-QSTVSDVPR-DLEVVA 286
Query: 1243 ITPESCSLSWKPPLDDGGSPITNYVVEKYESATGFWSKLSSF-VRSPAYDVFGLETNRQY 1301
TP S +SW P + Y + E+ + + + GL+ Y
Sbjct: 287 ATPTSLLISWDAP----AVTVRYYRITYGETGGNSPVQEFTVPGSKSTATISGLKPGVDY 342
Query: 1302 RFRVRAENQYGVSEPLELDNSITAK 1326
V A G S SI +
Sbjct: 343 TITVYAVTGRGDSPASSKPISINYR 367
Score = 124 bits (314), Expect = 1e-30
Identities = 41/215 (19%), Positives = 70/215 (32%), Gaps = 15/215 (6%)
Query: 254 YTVNLSNSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYV 313
Y V++ + PP L + I T + W PP + +T+++
Sbjct: 71 YNVSVYTVKDDKESVPISDTIIPAVPPPTDLRFTNIGPDTMRVTWAPPP---SIDLTNFL 127
Query: 314 VERRDISMPHWI-CISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAK 372
V + + +S + D ++ L G EY+ V +V E PL G
Sbjct: 128 VRYSPVKNEEDVAELSISPSDNAVVLTNLLPGTEYVVSVSSVYEQHESTPLRG------- 180
Query: 373 SPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAIC 432
P + + + + W P + I GY I H R +
Sbjct: 181 RQKTGLDSPTGIDFSDITANSFTVHWIAP----RATITGYRIRHHPEHFSGRPREDRVPH 236
Query: 433 APSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSAS 467
+ + I + NL G +Y + A N S
Sbjct: 237 SRNSITLTNLTPGTEYVVSIVALNGREESPLLIGQ 271
Score = 124 bits (314), Expect = 1e-30
Identities = 41/215 (19%), Positives = 70/215 (32%), Gaps = 15/215 (6%)
Query: 1861 YTVNLSNSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYV 1920
Y V++ + PP L + I T + W PP + +T+++
Sbjct: 71 YNVSVYTVKDDKESVPISDTIIPAVPPPTDLRFTNIGPDTMRVTWAPPP---SIDLTNFL 127
Query: 1921 VERRDISMPHWI-CISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAK 1979
V + + +S + D ++ L G EY+ V +V E PL G
Sbjct: 128 VRYSPVKNEEDVAELSISPSDNAVVLTNLLPGTEYVVSVSSVYEQHESTPLRG------- 180
Query: 1980 SPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAIC 2039
P + + + + W P + I GY I H R +
Sbjct: 181 RQKTGLDSPTGIDFSDITANSFTVHWIAP----RATITGYRIRHHPEHFSGRPREDRVPH 236
Query: 2040 APSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSAS 2074
+ + I + NL G +Y + A N S
Sbjct: 237 SRNSITLTNLTPGTEYVVSIVALNGREESPLLIGQ 271
Score = 123 bits (311), Expect = 3e-30
Identities = 48/223 (21%), Positives = 73/223 (32%), Gaps = 20/223 (8%)
Query: 254 YTVNLS--NSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTH 311
Y V++S S P G +D S+IT ++ T+HW P +T
Sbjct: 162 YVVSVSSVYEQHE-STPLRGRQKTGLDSPTG-IDFSDITANSFTVHWIAP--RA--TITG 215
Query: 312 YVVERRDISMPHWI-CISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIK 370
Y + + + LT G EY+ ++A+N P L
Sbjct: 216 YRIRHHPEHFSGRPREDRVPHSRNSITLTNLTPGTEYVVSIVALNGREESPLLI------ 269
Query: 371 AKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVA 430
P V + +SWD P ++ Y I E G ++ +
Sbjct: 270 -GQQSTVSDVPRDLEVVAATPTSLLISWDAP----AVTVRYYRITYGETGGNSPVQEFTV 324
Query: 431 ICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIK 473
+ S I L G Y VYA G S SS S+ +
Sbjct: 325 PGSKSTATISGLKPGVDYTITVYAVTGRGDSPASSKPISINYR 367
Score = 123 bits (311), Expect = 3e-30
Identities = 48/223 (21%), Positives = 73/223 (32%), Gaps = 20/223 (8%)
Query: 1861 YTVNLS--NSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTH 1918
Y V++S S P G +D S+IT ++ T+HW P +T
Sbjct: 162 YVVSVSSVYEQHE-STPLRGRQKTGLDSPTG-IDFSDITANSFTVHWIAP--RA--TITG 215
Query: 1919 YVVERRDISMPHWI-CISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIK 1977
Y + + + LT G EY+ ++A+N P L
Sbjct: 216 YRIRHHPEHFSGRPREDRVPHSRNSITLTNLTPGTEYVVSIVALNGREESPLLI------ 269
Query: 1978 AKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVA 2037
P V + +SWD P ++ Y I E G ++ +
Sbjct: 270 -GQQSTVSDVPRDLEVVAATPTSLLISWDAP----AVTVRYYRITYGETGGNSPVQEFTV 324
Query: 2038 ICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIK 2080
+ S I L G Y VYA G S SS S+ +
Sbjct: 325 PGSKSTATISGLKPGVDYTITVYAVTGRGDSPASSKPISINYR 367
Score = 114 bits (288), Expect = 3e-27
Identities = 78/411 (18%), Positives = 122/411 (29%), Gaps = 70/411 (17%)
Query: 378 PSPP-GIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPS- 435
SPP + + + +SW++ I GY I + + A
Sbjct: 2 LSPPTNLHLEANPDTGVLTVSWERS---TTPDITGYRITTTPTNGQQGNSLEEVVHADQS 58
Query: 436 QINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPM-----AAKAPEIIV---PL 487
NL G +Y VY + S+P S + + P + V P
Sbjct: 59 SCTFDNLSPGLEYNVSVYTVKDDKESVPISDTIIPAVPPPTDLRFTNIGPDTMRVTWAPP 118
Query: 488 RNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVD 547
+ + + N ++ +S I+PS + T
Sbjct: 119 PSID-LTNFLVRYSPVKNEEDVAELS-------ISPSDNAVVLTNLLPGT---------- 160
Query: 548 ADEYVCR--AVNKGGVKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENVV------VKIP 599
EYV +V + ST T P + D N +
Sbjct: 161 --EYVVSVSSVYEQHE-STPLRGRQKTGL---DSPT--GIDFSDITANSFTVHWIAPRAT 212
Query: 600 FTGYPKPKITWYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAPY-----RVVAEND 654
TGY +I + V S LT + P +VA N
Sbjct: 213 ITGY---RIR-HHPEHFSGRPREDRVPHSRNSITLT-------NLTPGTEYVVSIVALNG 261
Query: 655 LGMDSAIVKIQISDRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMS 714
+S ++ Q S D P+ V SL + W AP + Y + E +
Sbjct: 262 RE-ESPLLIGQQSTVSDVPRDLEVVAATPTSLLISWDAP----AVTVRYYRITYGETGGN 316
Query: 715 SWIRVG--NTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTK 763
S ++ +T I+GL PG Y VYA G S S+ I +
Sbjct: 317 SPVQEFTVPGSKSTATISGLKPGVDYTITVYAVTGRGDSPASSKPISINYR 367
Score = 111 bits (279), Expect = 5e-26
Identities = 56/399 (14%), Positives = 105/399 (26%), Gaps = 79/399 (19%)
Query: 1005 PGAPKGV----DSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTS 1060
P + + +++ W + I Y + + + +
Sbjct: 2 LSPPTNLHLEANPDTGVLTVSWERST---TPDITGYRITTTPTNGQQGNSLEE-VVHADQ 57
Query: 1061 LKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPWS 1120
+L EY V V + S
Sbjct: 58 SSCT------------------------------FDNLSPGLEYNVSVYTVKDDKE---S 84
Query: 1121 SSSDIIMCCAPPCAPKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPI--WTVNGDEVS 1178
+ A P P +DL ++ T+ V ++ P + + V V
Sbjct: 85 VPISDTIIPAVP-PP---TDLRFTNIG-----PDTMRVTWA-PPPSIDLTNFLVRYSPVK 134
Query: 1179 PDGRIKFETSE-NQTIYRNKSAKRATDSGSYTIQL--VNTVGSDSASCKVYVVDKPSPPQ 1235
+ + + + + T Y + + V S + P
Sbjct: 135 NEEDVAELSISPSDNAVVLTNLLPGT---EYVVSVSSVYEQHE-STPLRGRQKTGLDSPT 190
Query: 1236 GPLDVSDITPESCSLSWKPPLDDGGSPITNYVVEKYESATGFWSKLSSFVRS-PAYDVFG 1294
G +D SDIT S ++ W P + IT Y + + + S + +
Sbjct: 191 G-IDFSDITANSFTVHWIAP----RATITGYRIRHHPEHFSGRPREDRVPHSRNSITLTN 245
Query: 1295 LETNRQYRFRVRAENQYGVSEPLELDNSITAKFPFTVPDPPGQPQIVDWDTNNATLMWDR 1354
L +Y + A N S TV D P ++V + + WD
Sbjct: 246 LTPGTEYVVSIVALNGREESPL-------LIGQQSTVSDVPRDLEVVAATPTSLLISWDA 298
Query: 1355 PRTDGGSKIQGYKMLLKTPTGELPTTIWSKIRPTSSTVY 1393
P ++ Y++ G P P S +
Sbjct: 299 P----AVTVRYYRITYGETGGNSPVQ--EFTVPGSKSTA 331
Score = 107 bits (270), Expect = 8e-25
Identities = 41/251 (16%), Positives = 72/251 (28%), Gaps = 54/251 (21%)
Query: 898 VLDRPHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVE-KKDYNSTVWTKVSSYVT 956
++ PP +L D++ + W PP ++TN++V N ++S +
Sbjct: 91 IIPAVPPPTDLRFTNIGPDTMRVTWAPPP---SIDLTNFLVRYSPVKNEEDVAELSISPS 147
Query: 957 TPFVRVRNLAIGSTYEFRVMAENQYGLSKPALTIDPIKAKHPFDVPGAPGAPKGVDSTED 1016
V + NL G+ Y V + + S P +P D T +
Sbjct: 148 DNAVVLTNLLPGTEYVVSVSSVYEQHESTPLRG-------RQKTGLDSPTGIDFSDITAN 200
Query: 1017 SISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEGKSIGSE 1076
S ++ W PR + I Y + + S+
Sbjct: 201 SFTVHWIAPR----ATITGYRIRHHPEHFSGRPREDRVPHSRNSI--------------- 241
Query: 1077 RGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPWSSSSDIIMCCAPPCAPK 1136
+T+L EY + A+N + P P
Sbjct: 242 -----------------TLTNLTPGTEYVVSIVALNGREESPLLIGQQS----TVSDVP- 279
Query: 1137 ITSDLSIRDMT 1147
DL + T
Sbjct: 280 --RDLEVVAAT 288
Score = 101 bits (252), Expect = 1e-22
Identities = 29/193 (15%), Positives = 57/193 (29%), Gaps = 15/193 (7%)
Query: 277 PGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTC--HDT 334
PP + T+ W +T Y + + + +
Sbjct: 2 LSPPTNLHLEANPDTGVLTVSWERSTTP---DITGYRITTTPTNGQQGNSLEEVVHADQS 58
Query: 335 TFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFV 394
+ L+ G EY V V ++ P+ PP T +G D +
Sbjct: 59 SCTFDNLSPGLEYNVSVYTVKDDKESVPISDTII-------PAVPPPTDLRFTNIGPDTM 111
Query: 395 NLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYA 454
++W P + + + V ++ + + + + NL+ G +Y V +
Sbjct: 112 RVTWAPP---PSIDLTNFLVRYSPVKNEEDVAELSISPSDNAVVLTNLLPGTEYVVSVSS 168
Query: 455 QNEAGLSLPSSAS 467
E S P
Sbjct: 169 VYEQHESTPLRGR 181
Score = 101 bits (252), Expect = 1e-22
Identities = 29/193 (15%), Positives = 57/193 (29%), Gaps = 15/193 (7%)
Query: 1884 PGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTC--HDT 1941
PP + T+ W +T Y + + + +
Sbjct: 2 LSPPTNLHLEANPDTGVLTVSWERSTTP---DITGYRITTTPTNGQQGNSLEEVVHADQS 58
Query: 1942 TFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFV 2001
+ L+ G EY V V ++ P+ PP T +G D +
Sbjct: 59 SCTFDNLSPGLEYNVSVYTVKDDKESVPISDTII-------PAVPPPTDLRFTNIGPDTM 111
Query: 2002 NLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYA 2061
++W P + + + V ++ + + + + NL+ G +Y V +
Sbjct: 112 RVTWAPP---PSIDLTNFLVRYSPVKNEEDVAELSISPSDNAVVLTNLLPGTEYVVSVSS 168
Query: 2062 QNEAGLSLPSSAS 2074
E S P
Sbjct: 169 VYEQHESTPLRGR 181
Score = 96.4 bits (240), Expect = 5e-21
Identities = 46/249 (18%), Positives = 81/249 (32%), Gaps = 35/249 (14%)
Query: 1207 SYTIQLVNTVGS-DSASCKVYVVDKPSPPQGPLDVSDITPESCSLSWKPPLDDGGSPITN 1265
Y + + +S ++ PP L ++I P++ ++W PP +TN
Sbjct: 70 EYNVSVYTVKDDKESVPISDTIIPAVPPPT-DLRFTNIGPDTMRVTWAPP---PSIDLTN 125
Query: 1266 YVVEKYESATGFWSKLSSFVRSP-AYDVFGLETNRQYRFRVRAENQYGVSEPLELDNSIT 1324
++V S S A + L +Y V + + S PL
Sbjct: 126 FLVRYSPVKNEEDVAELSISPSDNAVVLTNLLPGTEYVVSVSSVYEQHESTPLRG----- 180
Query: 1325 AKFPFTVPDPPGQPQIVDWDTNNATLMWDRPRTDGGSKIQGYKMLLKTPTGELPTTIWSK 1384
T D P D N+ T+ W PR + I GY++
Sbjct: 181 --RQKTGLDSPTGIDFSDITANSFTVHWIAPR----ATITGYRIRHHPEHFSGRPR--ED 232
Query: 1385 IRPTSSTVYC-----KDT----TMNSSNSEPGKQSGPVIVEEQPNKPVMDLSGVRDITVK 1435
P S T ++ + N G++ P+++ +Q RD+ V
Sbjct: 233 RVPHSRNSITLTNLTPGTEYVVSIVALN---GREESPLLIGQQSTVS----DVPRDLEVV 285
Query: 1436 AGEDFSIHV 1444
A S+ +
Sbjct: 286 AATPTSLLI 294
Score = 89.5 bits (222), Expect = 1e-18
Identities = 57/478 (11%), Positives = 109/478 (22%), Gaps = 134/478 (28%)
Query: 1231 PSPPQGPLDVSDITPESCSLSWKPPLDDGGSPITNYVVEKYESATGFWSKLSSFVR--SP 1288
SPP ++ ++SW+ IT Y + + + L V
Sbjct: 2 LSPPTNLHLEANPDTGVLTVSWERS---TTPDITGYRITTTPTNGQQGNSLEEVVHADQS 58
Query: 1289 AYDVFGLETNRQYRFRVRAENQYGVSEPLELDNSITAKFPFTVPDPPGQPQIVDWDTNNA 1348
+ L +Y V S P+ S T PP + + +
Sbjct: 59 SCTFDNLSPGLEYNVSVYTVKDDKESVPI----SDTII---PAVPPPTDLRFTNIGPDTM 111
Query: 1349 TLMWDRPRTDGGSKIQGYKMLLKTPTGELPTTIWSKIRPTSSTVYCKDTTMNSS-----N 1403
+ W P + + + +P I P+ + V + + +
Sbjct: 112 RVTWAPPP---SIDLTNFL-VRYSPVKNEEDVAELSISPSDNAVVLTNLLPGTEYVVSVS 167
Query: 1404 SEPGKQSGPVIVEEQPNKPVMDLSGVRDITVKAGEDFSIHVPFMAFPQPAAFWFANDSII 1463
S + + Q I S V W A + I
Sbjct: 168 SVYEQHESTPLRGRQKTGL----DSPTGIDFSDITANSFTV----------HWIAPRATI 213
Query: 1464 ----------DDSDTRVHKQLTMNSASLVVKNSQRSDGGQYRLQLK--NPAGFDTATLHS 1511
S ++ + S+ + N G +Y + + N
Sbjct: 214 TGYRIRHHPEHFSGRPREDRVPHSRNSITLTNLTP--GTEYVVSIVALNGREESPLL--- 268
Query: 1512 RLRTLPDSVNPRCHLPSSTSKERPKFPTHPNHQPWLKWARASLTSKGVDSTEDSISLVWS 1571
P + V +T S+ + W
Sbjct: 269 ----------------IGQQSTVSDVPRDL---------------EVVAATPTSLLISWD 297
Query: 1572 KPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEGKSIGSERGSTAQF 1631
P ++ Y + + ++ +
Sbjct: 298 AP----AVTVRYYRITYGETGGNSPVQEFTVPGSKS------------------------ 329
Query: 1632 LEREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPSICTTPVKI 1689
+ ++ L G DY + AV G S S + P+ I
Sbjct: 330 ---------------------TATISGLKPGVDYTITVYAVTGRGDSPAS--SKPISI 364
Score = 61.8 bits (150), Expect = 1e-09
Identities = 14/88 (15%), Positives = 23/88 (26%), Gaps = 5/88 (5%)
Query: 900 DRPHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTKVSSY-VTTP 958
P +L SL + W P + Y + + + + +
Sbjct: 274 TVSDVPRDLEVVAATPTSLLISWDAP----AVTVRYYRITYGETGGNSPVQEFTVPGSKS 329
Query: 959 FVRVRNLAIGSTYEFRVMAENQYGLSKP 986
+ L G Y V A G S
Sbjct: 330 TATISGLKPGVDYTITVYAVTGRGDSPA 357
Score = 45.6 bits (108), Expect = 1e-04
Identities = 16/61 (26%), Positives = 25/61 (40%), Gaps = 2/61 (3%)
Query: 22 YIIERREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPSICTTPVK 81
Y I E GG ++ + + ++ L G DY + AV G S S + P+
Sbjct: 306 YRITYGETGGNSPVQEFTVPGSKSTATISGLKPGVDYTITVYAVTGRGDSPAS--SKPIS 363
Query: 82 I 82
I
Sbjct: 364 I 364
Score = 45.2 bits (107), Expect = 2e-04
Identities = 12/59 (20%), Positives = 21/59 (35%)
Query: 22 YIIERREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPSICTTPV 80
Y I + + + S ++ NL G +Y I+A+N +S I
Sbjct: 216 YRIRHHPEHFSGRPREDRVPHSRNSITLTNLTPGTEYVVSIVALNGREESPLLIGQQST 274
Score = 44.4 bits (105), Expect = 3e-04
Identities = 8/59 (13%), Positives = 21/59 (35%)
Query: 22 YIIERREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPSICTTPV 80
+++ V + + + + + NL+ G +Y + +V +S P
Sbjct: 126 FLVRYSPVKNEEDVAELSISPSDNAVVLTNLLPGTEYVVSVSSVYEQHESTPLRGRQKT 184
Score = 40.2 bits (94), Expect = 0.006
Identities = 12/58 (20%), Positives = 19/58 (32%), Gaps = 1/58 (1%)
Query: 22 YIIERREVGGAIWLKCND-YNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPSICTT 78
Y I G + + + S + NL G +Y + V +S P T
Sbjct: 34 YRITTTPTNGQQGNSLEEVVHADQSSCTFDNLSPGLEYNVSVYTVKDDKESVPISDTI 91
>3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III
domain, oncofetal splice VARI extra-domain B, EIIIB,
ED-B, angiogenesis, integrin; 2.40A {Homo sapiens}
Length = 375
Score = 148 bits (376), Expect = 1e-38
Identities = 74/444 (16%), Positives = 119/444 (26%), Gaps = 85/444 (19%)
Query: 902 PHPPENLHADEFAG-DSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTKVSSYV--TTP 958
PP NLH + LT+ W +IT Y + N + V
Sbjct: 3 LSPPTNLHLEANPDTGVLTVSWERST---TPDITGYRITTTPTNGQQGNSLEEVVHADQS 59
Query: 959 FVRVRNLAIGSTYEFRVMAENQYGLSKPALTIDPIKAKHPFDVPGAPGAPKGVDSTEDSI 1018
NL+ G Y V S PI +VP VD T+ SI
Sbjct: 60 SCTFDNLSPGLEYNVSVYTVKDDKES------VPISDTIIPEVP-QLTDLSFVDITDSSI 112
Query: 1019 SLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEGKSIGSERG 1078
L W+ S I Y + + I
Sbjct: 113 GLRWTPLNS---STIIGYRITVVAAGEGIPIFEDFVDSSVGYY----------------- 152
Query: 1079 STAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPWSSSSDIIMCCAPPCAPKIT 1138
VT L +Y+ V + G+ ++ + P
Sbjct: 153 ---------------TVTGLEPGIDYDISVITLINGGESAPTTLTQQT----AVPPP--- 190
Query: 1139 SDLSIRDMTVLAGEEFTITVPFSGRPKPTPI--WTVN-GDEVSPDGRIKFETSENQTIYR 1195
+DL ++ T+ V ++ P + + V + + + S +
Sbjct: 191 TDLRFTNIG-----PDTMRVTWA-PPPSIDLTNFLVRYSPVKNEEDVAELSISPSDNAVV 244
Query: 1196 NKSAKRATDSGSYTIQL--VNTVG-SDSASCKVYVVDKPSPPQGPLDVSDITPESCSLSW 1252
+ T Y + + V S + P G +D SDIT S ++ W
Sbjct: 245 LTNLLPGT---EYVVSVSSVYEQHESTPLRGRQKTG--LDSPTG-IDFSDITANSFTVHW 298
Query: 1253 KPPLDDGGSPITNYVVEKYESATGFWSKLSSF-VRSPAYDVFGLETNRQYRFRVRAENQY 1311
P + IT Y + + + + + L +Y + A N
Sbjct: 299 IAP----RATITGYRIRHHPEHFSGRPREDRVPHSRNSITLTNLTPGTEYVVSIVALNGR 354
Query: 1312 GVSEPLELDNSITAKFPFTVPDPP 1335
S L S TV
Sbjct: 355 EESPLLIGQQS-------TVSAHH 371
Score = 119 bits (299), Expect = 1e-28
Identities = 43/218 (19%), Positives = 71/218 (32%), Gaps = 15/218 (6%)
Query: 253 DYTVNLSNSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHY 312
DY +++ T PP L + I T + W PP + +T++
Sbjct: 162 DYDISVITLINGGESAPTTLTQQTAVPPPTDLRFTNIGPDTMRVTWAPPP---SIDLTNF 218
Query: 313 VVE-RRDISMPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKA 371
+V + +S + D ++ L G EY+ V +V E PL G
Sbjct: 219 LVRYSPVKNEEDVAELSISPSDNAVVLTNLLPGTEYVVSVSSVYEQHESTPLRG------ 272
Query: 372 KSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAI 431
P + + + + W P + I GY I H R +
Sbjct: 273 -RQKTGLDSPTGIDFSDITANSFTVHWIAP----RATITGYRIRHHPEHFSGRPREDRVP 327
Query: 432 CAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNS 469
+ + I + NL G +Y + A N S S
Sbjct: 328 HSRNSITLTNLTPGTEYVVSIVALNGREESPLLIGQQS 365
Score = 119 bits (299), Expect = 1e-28
Identities = 43/218 (19%), Positives = 71/218 (32%), Gaps = 15/218 (6%)
Query: 1860 DYTVNLSNSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHY 1919
DY +++ T PP L + I T + W PP + +T++
Sbjct: 162 DYDISVITLINGGESAPTTLTQQTAVPPPTDLRFTNIGPDTMRVTWAPPP---SIDLTNF 218
Query: 1920 VVE-RRDISMPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKA 1978
+V + +S + D ++ L G EY+ V +V E PL G
Sbjct: 219 LVRYSPVKNEEDVAELSISPSDNAVVLTNLLPGTEYVVSVSSVYEQHESTPLRG------ 272
Query: 1979 KSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAI 2038
P + + + + W P + I GY I H R +
Sbjct: 273 -RQKTGLDSPTGIDFSDITANSFTVHWIAP----RATITGYRIRHHPEHFSGRPREDRVP 327
Query: 2039 CAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNS 2076
+ + I + NL G +Y + A N S S
Sbjct: 328 HSRNSITLTNLTPGTEYVVSIVALNGREESPLLIGQQS 365
Score = 115 bits (289), Expect = 3e-27
Identities = 39/215 (18%), Positives = 67/215 (31%), Gaps = 19/215 (8%)
Query: 254 YTVNLSNSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYV 313
YTV S +S T +P L +IT + L W P + + Y
Sbjct: 77 YTVKDDKESVPISDTII---PEVPQLT--DLSFVDITDSSIGLRWTPL--NSS-TIIGYR 128
Query: 314 VERRDISMPHWI-CISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAK 372
+ I + V GL G +Y V+ + G P
Sbjct: 129 ITVVAAGEGIPIFEDFVDSSVGYYTVTGLEPGIDYDISVITLINGGESAPTTL------- 181
Query: 373 SPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAIC 432
+ PP T +G D + ++W P + + + V ++
Sbjct: 182 TQQTAVPPPTDLRFTNIGPDTMRVTWAPPP---SIDLTNFLVRYSPVKNEEDVAELSISP 238
Query: 433 APSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSAS 467
+ + + + NL+ G +Y V + E S P
Sbjct: 239 SDNAVVLTNLLPGTEYVVSVSSVYEQHESTPLRGR 273
Score = 115 bits (289), Expect = 3e-27
Identities = 39/215 (18%), Positives = 67/215 (31%), Gaps = 19/215 (8%)
Query: 1861 YTVNLSNSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYV 1920
YTV S +S T +P L +IT + L W P + + Y
Sbjct: 77 YTVKDDKESVPISDTII---PEVPQLT--DLSFVDITDSSIGLRWTPL--NSS-TIIGYR 128
Query: 1921 VERRDISMPHWI-CISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAK 1979
+ I + V GL G +Y V+ + G P
Sbjct: 129 ITVVAAGEGIPIFEDFVDSSVGYYTVTGLEPGIDYDISVITLINGGESAPTTL------- 181
Query: 1980 SPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAIC 2039
+ PP T +G D + ++W P + + + V ++
Sbjct: 182 TQQTAVPPPTDLRFTNIGPDTMRVTWAPPP---SIDLTNFLVRYSPVKNEEDVAELSISP 238
Query: 2040 APSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSAS 2074
+ + + + NL+ G +Y V + E S P
Sbjct: 239 SDNAVVLTNLLPGTEYVVSVSSVYEQHESTPLRGR 273
Score = 111 bits (280), Expect = 4e-26
Identities = 68/406 (16%), Positives = 119/406 (29%), Gaps = 71/406 (17%)
Query: 378 PSPPGIPVVTQVGG-DFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPS- 435
SPP + + +SW++ I GY I + + A
Sbjct: 3 LSPPTNLHLEANPDTGVLTVSWERS---TTPDITGYRITTTPTNGQQGNSLEEVVHADQS 59
Query: 436 QINIPNLIEGRQYEFRVYAQNEAGLSLPSSAS-----NSVQIKDPMAAKAPEIIV---PL 487
NL G +Y VY + S+P S + + + I + PL
Sbjct: 60 SCTFDNLSPGLEYNVSVYTVKDDKESVPISDTIIPEVPQLTDLSFVDITDSSIGLRWTPL 119
Query: 488 RNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVD 547
++ I + G P + S ++ +
Sbjct: 120 NSST-IIGYRITVVAAGEGIPIFE-------DFVDSSVGYYTVTGLEPGI---------- 161
Query: 548 ADEYVCR--AVNKGGVKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENVVV-------KI 598
+Y + GG +S L TA PP D + + G + + I
Sbjct: 162 --DYDISVITLINGG-ESAPTTLTQQTAVP---PPT--DLRFTNIGPDTMRVTWAPPPSI 213
Query: 599 PFTGYPKPKITWYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAPY-----RVVAEN 653
T + + Y + E + S+ +LT + P V +
Sbjct: 214 DLTNF----LVRYSPVKNEEDVAELSISPSDNAVVLT-------NLLPGTEYVVSVSSVY 262
Query: 654 DLGMDSAIVKIQISDRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPM 713
+ +S ++ + D P DI +S + W AP + IT Y +
Sbjct: 263 EQH-ESTPLRGRQKTGLDSPTGIDFSDITANSFTVHWIAP----RATITGYRIRHHPEHF 317
Query: 714 SSWIRVG--NTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTS 757
S R ++ +T L+PG +Y + A N S
Sbjct: 318 SGRPREDRVPHSRNSITLTNLTPGTEYVVSIVALNGREESPLLIGQ 363
Score = 111 bits (279), Expect = 6e-26
Identities = 68/409 (16%), Positives = 114/409 (27%), Gaps = 92/409 (22%)
Query: 1001 VPGAPGAPKGV----DSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHI 1056
+P +P P + + +++ W + I Y + + + +
Sbjct: 1 MPLSP--PTNLHLEANPDTGVLTVSWERST---TPDITGYRITTTPTNGQQGNSLEE-VV 54
Query: 1057 PDTSLKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQ 1116
+L EY V V +
Sbjct: 55 HADQSSCT------------------------------FDNLSPGLEYNVSVYTVKDDKE 84
Query: 1117 GPWSSSSDIIMCCAPPCAPKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDE 1176
S + P P++T DLS D+T + +I + WT
Sbjct: 85 SVPISDT------IIPEVPQLT-DLSFVDIT-----DSSIGL----------RWTPLNSS 122
Query: 1177 VSPDGRIKF----ETSENQTIYRNKSAKRATDSG-----SYTIQL--VNTVGSDSASCKV 1225
RI E + + S T +G Y I + + G +SA +
Sbjct: 123 TIIGYRITVVAAGEGIPIFEDFVDSSVGYYTVTGLEPGIDYDISVITLINGG-ESAPTTL 181
Query: 1226 YVVDKPSPPQGPLDVSDITPESCSLSWKPPLDDGGSPITNYVVEKYESATGFWSKLSSFV 1285
PP L ++I P++ ++W PP +TN++V S
Sbjct: 182 TQQTAVPPPTD-LRFTNIGPDTMRVTWAPPP---SIDLTNFLVRYSPVKNEEDVAELSIS 237
Query: 1286 RSP-AYDVFGLETNRQYRFRVRAENQYGVSEPLELDNSITAKFPFTVPDPPGQPQIVDWD 1344
S A + L +Y V + + S PL T D P D
Sbjct: 238 PSDNAVVLTNLLPGTEYVVSVSSVYEQHESTPLRGRQK-------TGLDSPTGIDFSDIT 290
Query: 1345 TNNATLMWDRPRTDGGSKIQGYKMLLKTPTGELPTTIWSKIRPTSSTVY 1393
N+ T+ W PR + I GY++ P S
Sbjct: 291 ANSFTVHWIAPR----ATITGYRIRHHPEHFSGRPR--EDRVPHSRNSI 333
Score = 107 bits (270), Expect = 8e-25
Identities = 36/232 (15%), Positives = 64/232 (27%), Gaps = 47/232 (20%)
Query: 902 PHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTKVSSYVTTP-FV 960
PP +L D++ + W PP ++TN++V + S + V
Sbjct: 187 VPPPTDLRFTNIGPDTMRVTWAPPP---SIDLTNFLVRYSPVKNEEDVAELSISPSDNAV 243
Query: 961 RVRNLAIGSTYEFRVMAENQYGLSKPALTIDPIKAKHPFDVPGAPGAPKGVDSTEDSISL 1020
+ NL G+ Y V + + S P +P D T +S ++
Sbjct: 244 VLTNLLPGTEYVVSVSSVYEQHESTPLRG-------RQKTGLDSPTGIDFSDITANSFTV 296
Query: 1021 VWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEGKSIGSERGST 1080
W PR + I Y + + S+
Sbjct: 297 HWIAPR----ATITGYRIRHHPEHFSGRPREDRVPHSRNSIT------------------ 334
Query: 1081 AQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPWSSSSDIIMCCAPP 1132
+T+L EY + A+N + P +
Sbjct: 335 --------------LTNLTPGTEYVVSIVALNGREESPLLIGQQSTVSAHHH 372
Score = 104 bits (262), Expect = 1e-23
Identities = 30/198 (15%), Positives = 53/198 (26%), Gaps = 16/198 (8%)
Query: 276 LPGPPIGPLDVSEITKHTC-TLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHD- 333
+P P L + T+ W +T Y + + + H
Sbjct: 1 MPLSPPTNLHLEANPDTGVLTVSWERS---TTPDITGYRITTTPTNGQQGNSLEEVVHAD 57
Query: 334 -TTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGD 392
++ L+ G EY V V ++ P+ + +
Sbjct: 58 QSSCTFDNLSPGLEYNVSVYTVKDDKESVPISDT-------IIPEVPQLTDLSFVDITDS 110
Query: 393 FVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRV 452
+ L W S I GY I G + + + L G Y+ V
Sbjct: 111 SIGLRWTPL---NSSTIIGYRITVVAAGEGIPIFEDFVDSSVGYYTVTGLEPGIDYDISV 167
Query: 453 YAQNEAGLSLPSSASNSV 470
G S P++ +
Sbjct: 168 ITLINGGESAPTTLTQQT 185
Score = 104 bits (262), Expect = 1e-23
Identities = 30/198 (15%), Positives = 53/198 (26%), Gaps = 16/198 (8%)
Query: 1883 LPGPPIGPLDVSEITKHTC-TLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHD- 1940
+P P L + T+ W +T Y + + + H
Sbjct: 1 MPLSPPTNLHLEANPDTGVLTVSWERS---TTPDITGYRITTTPTNGQQGNSLEEVVHAD 57
Query: 1941 -TTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGD 1999
++ L+ G EY V V ++ P+ + +
Sbjct: 58 QSSCTFDNLSPGLEYNVSVYTVKDDKESVPISDT-------IIPEVPQLTDLSFVDITDS 110
Query: 2000 FVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRV 2059
+ L W S I GY I G + + + L G Y+ V
Sbjct: 111 SIGLRWTPL---NSSTIIGYRITVVAAGEGIPIFEDFVDSSVGYYTVTGLEPGIDYDISV 167
Query: 2060 YAQNEAGLSLPSSASNSV 2077
G S P++ +
Sbjct: 168 ITLINGGESAPTTLTQQT 185
Score = 49.0 bits (117), Expect = 1e-05
Identities = 21/172 (12%), Positives = 52/172 (30%), Gaps = 48/172 (27%)
Query: 1559 VDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSL--------- 1609
+ D++ + W+ P + ++V + +++ + D ++
Sbjct: 196 TNIGPDTMRVTWAPPP---SIDLTNFLVRYSPVKNEEDVAELSISPSDNAVVLTNLLPGT 252
Query: 1610 KYVLWVS------EGKSI---------------GSERGSTAQFLE--------------- 1633
+YV+ VS E + S+ + + +
Sbjct: 253 EYVVSVSSVYEQHESTPLRGRQKTGLDSPTGIDFSDITANSFTVHWIAPRATITGYRIRH 312
Query: 1634 REVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPSICTT 1685
+ + + S ++ NL G +Y I+A+N +S I
Sbjct: 313 HPEHFSGRPREDRVPHSRNSITLTNLTPGTEYVVSIVALNGREESPLLIGQQ 364
Score = 46.0 bits (109), Expect = 1e-04
Identities = 12/57 (21%), Positives = 21/57 (36%)
Query: 22 YIIERREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPSICTT 78
Y I + + + S ++ NL G +Y I+A+N +S I
Sbjct: 308 YRIRHHPEHFSGRPREDRVPHSRNSITLTNLTPGTEYVVSIVALNGREESPLLIGQQ 364
Score = 44.4 bits (105), Expect = 4e-04
Identities = 23/175 (13%), Positives = 40/175 (22%), Gaps = 49/175 (28%)
Query: 1557 KGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSL------- 1609
VD T+ SI L W+ S I Y + + I
Sbjct: 103 SFVDITDSSIGLRWTPLNS---STIIGYRITVVAAGEGIPIFEDFVDSSVGYYTVTGLEP 159
Query: 1610 --KYVLWVSEGKSIGSERGSTAQFLE---------------------------------- 1633
Y + V + G +T
Sbjct: 160 GIDYDISVITLINGGESAPTTLTQQTAVPPPTDLRFTNIGPDTMRVTWAPPPSIDLTNFL 219
Query: 1634 ---REVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPSICTT 1685
V + + + + + NL+ G +Y + +V +S P
Sbjct: 220 VRYSPVKNEEDVAELSISPSDNAVVLTNLLPGTEYVVSVSSVYEQHESTPLRGRQ 274
Score = 44.0 bits (104), Expect = 4e-04
Identities = 8/57 (14%), Positives = 21/57 (36%)
Query: 22 YIIERREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPSICTT 78
+++ V + + + + + NL+ G +Y + +V +S P
Sbjct: 218 FLVRYSPVKNEEDVAELSISPSDNAVVLTNLLPGTEYVVSVSSVYEQHESTPLRGRQ 274
Score = 43.6 bits (103), Expect = 6e-04
Identities = 14/59 (23%), Positives = 24/59 (40%)
Query: 22 YIIERREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPSICTTPV 80
Y I G I + + + ++V L G DY+ +I + G+S P+ T
Sbjct: 127 YRITVVAAGEGIPIFEDFVDSSVGYYTVTGLEPGIDYDISVITLINGGESAPTTLTQQT 185
Score = 41.7 bits (98), Expect = 0.002
Identities = 12/59 (20%), Positives = 19/59 (32%), Gaps = 1/59 (1%)
Query: 22 YIIERREVGGAIWLKCND-YNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPSICTTP 79
Y I G + + + S + NL G +Y + V +S P T
Sbjct: 35 YRITTTPTNGQQGNSLEEVVHADQSSCTFDNLSPGLEYNVSVYTVKDDKESVPISDTII 93
Score = 39.8 bits (93), Expect = 0.009
Identities = 14/128 (10%), Positives = 26/128 (20%), Gaps = 47/128 (36%)
Query: 1559 VDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEG 1618
+ +++ W + I Y + + + D S
Sbjct: 13 ANPDTGVLTVSWERST---TPDITGYRITTTPTNGQQGNSLEEVVHADQS---------- 59
Query: 1619 KSIGSERGSTAQFLEREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKS 1678
S + NL G +Y + V +S
Sbjct: 60 ----------------------------------SCTFDNLSPGLEYNVSVYTVKDDKES 85
Query: 1679 EPSICTTP 1686
P T
Sbjct: 86 VPISDTII 93
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin
superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus
norvegicus}
Length = 403
Score = 148 bits (375), Expect = 3e-38
Identities = 48/215 (22%), Positives = 88/215 (40%), Gaps = 9/215 (4%)
Query: 454 AQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTIS 513
A+N A + A + P + + N AI+ +A +C ++G P P+ +
Sbjct: 196 ARNPASTRTGNEAEVRILSD-PGLHRQLYFLQRPSNVIAIEGKDAVLECCVSGYPPPSFT 254
Query: 514 WLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTA 573
WL+G I ++ + G L+I++V D+ Y C K S AEL ++
Sbjct: 255 WLRGEEVIQLRSKKYSLLGG--SNLLISNVTDDDSGTYTCVVTYKNENISASAELTVLVP 312
Query: 574 PKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSERHAI 633
P F P Y + ++ + +G P P + W ++ +V+ +F +
Sbjct: 313 PWFLNHPS---NLYAYESMDIEFECAVSGKPVPTVNWMKNGDVVIPSDYFQIVGGSN--- 366
Query: 634 LTIRDASNVDTAPYRVVAENDLGMDSAIVKIQISD 668
L I D Y+ VAEN+ G + ++ +
Sbjct: 367 LRILGVVKSDEGFYQCVAENEAGNAQSSAQLIVPK 401
Score = 127 bits (320), Expect = 4e-31
Identities = 45/186 (24%), Positives = 75/186 (40%), Gaps = 5/186 (2%)
Query: 89 EKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRL 148
+ F+ +++ GK L+C +G P P WLR I ++ G L
Sbjct: 220 RQLYFLQRPSNVIAIEGKDAVLECCVSGYPPPSFTWLRGEEVIQLRSKKYSLLGGSN--L 277
Query: 149 HFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYA 208
+ VTD D+G YTC S+ + + PP P+ LY E + + + +
Sbjct: 278 LISNVTDDDSGTYTCVVTYKNENISASAELTVLVPPWFLNHPSNLYAYESMDIEFECAVS 337
Query: 209 GDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGT 268
G V+ KNG VV D F+ ++ + I + K D G Y N +G+ +
Sbjct: 338 GKPVPTVNWMKNGDVVIPSDYFQ--IVGGSNLR-ILGVVKSDEGFYQCVAENEAGNAQSS 394
Query: 269 FTINIT 274
+ +
Sbjct: 395 AQLIVP 400
Score = 127 bits (320), Expect = 4e-31
Identities = 45/186 (24%), Positives = 75/186 (40%), Gaps = 5/186 (2%)
Query: 1696 EKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRL 1755
+ F+ +++ GK L+C +G P P WLR I ++ G L
Sbjct: 220 RQLYFLQRPSNVIAIEGKDAVLECCVSGYPPPSFTWLRGEEVIQLRSKKYSLLGGSN--L 277
Query: 1756 HFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYA 1815
+ VTD D+G YTC S+ + + PP P+ LY E + + + +
Sbjct: 278 LISNVTDDDSGTYTCVVTYKNENISASAELTVLVPPWFLNHPSNLYAYESMDIEFECAVS 337
Query: 1816 GDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGT 1875
G V+ KNG VV D F+ ++ + I + K D G Y N +G+ +
Sbjct: 338 GKPVPTVNWMKNGDVVIPSDYFQ--IVGGSNLR-ILGVVKSDEGFYQCVAENEAGNAQSS 394
Query: 1876 FTINIT 1881
+ +
Sbjct: 395 AQLIVP 400
Score = 126 bits (317), Expect = 1e-30
Identities = 43/197 (21%), Positives = 76/197 (38%), Gaps = 6/197 (3%)
Query: 478 AKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYT 537
A + + A +C + G P PTI W K +++ P +
Sbjct: 119 AGPLRFLSQTESITAFMGDTVLLKCEVIGDPMPTIHWQKNQQDLNPIPGDSRVVVLPSGA 178
Query: 538 LIINSVYGVDADEYVCRAVNKGGVK-STKAELIIMTAPKFNVPPRFR---DTAYFDKGEN 593
L I+ + D+ Y C A N + +AE+ I++ P + F +G++
Sbjct: 179 LQISRLQPGDSGVYRCSARNPASTRTGNEAEVRILSDPGLHRQLYFLQRPSNVIAIEGKD 238
Query: 594 VVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAPYRVVAEN 653
V++ +GYP P TW R EVI+ + + L I + ++ D+ Y V
Sbjct: 239 AVLECCVSGYPPPSFTWLRGEEVIQLRSKKYSLLGG--SNLLISNVTDDDSGTYTCVVTY 296
Query: 654 DLGMDSAIVKIQISDRP 670
SA ++ + P
Sbjct: 297 KNENISASAELTVLVPP 313
Score = 124 bits (312), Expect = 4e-30
Identities = 68/440 (15%), Positives = 128/440 (29%), Gaps = 81/440 (18%)
Query: 167 NSVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPM-EVSLTKNGRVVQ 225
+ + +H P+ G N + D+ + + K+G ++
Sbjct: 5 SELESSHHHHHHGGRRSLHFVSEPSDAVTMRGGNVLLNCSAESDRGVPVIKWKKDGLILA 64
Query: 226 SDDRFKFTVLDD---YII-IFIKEIRKEDAGDYTVNLSNSSGS--VSGTFTINITGLPGP 279
+ L + I I K D G Y S +S T + + G
Sbjct: 65 LGMDDRKQQLPNGSLLIQNILHSRHHKPDEGLYQCEASLGDSGSIISRTAKVMVAGPLRF 124
Query: 280 PIGPLDVSEITKHTCTLH------------WNPPKYDGGLKVTHYVVERRDISMPHWICI 327
++ T L W + + R + +P
Sbjct: 125 LSQTESITAFMGDTVLLKCEVIGDPMPTIHW----QKNQQDLNPIPGDSRVVVLP----- 175
Query: 328 STTCHDTTFIVQGLTEGQEYLFHVMAVNENG-----------MGPPLEGINPIKAKSPYD 376
+ L G ++ A N + P + P +
Sbjct: 176 -----SGALQISRLQPGDSGVYRCSARNPASTRTGNEAEVRILSDPGLHRQLYFLQRPSN 230
Query: 377 KPSPPGIPVVTQ--VGGD-FVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICA 433
+ G V + V G + +W + + +++ +
Sbjct: 231 VIAIEGKDAVLECCVSGYPPPSFTWLR--GEEVIQLRSKKYSLLGGSN------------ 276
Query: 434 PSQINIPNLIE---GRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNA 490
+ I N+ + G Y + SAS + + P P + N
Sbjct: 277 ---LLISNVTDDDSGT-YT--CVVTYKNENI---SASAELTVLVP-----PWFLNHPSNL 322
Query: 491 NAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADE 550
A ++ + +F+C ++G P PT++W+K + PS I L I V D
Sbjct: 323 YAYESMDIEFECAVSGKPVPTVNWMKNGDVVIPSDYFQIVGGS---NLRILGVVKSDEGF 379
Query: 551 YVCRAVNKGGVKSTKAELII 570
Y C A N+ G + A+LI+
Sbjct: 380 YQCVAENEAGNAQSSAQLIV 399
Score = 124 bits (312), Expect = 4e-30
Identities = 68/440 (15%), Positives = 128/440 (29%), Gaps = 81/440 (18%)
Query: 1774 NSVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPM-EVSLTKNGRVVQ 1832
+ + +H P+ G N + D+ + + K+G ++
Sbjct: 5 SELESSHHHHHHGGRRSLHFVSEPSDAVTMRGGNVLLNCSAESDRGVPVIKWKKDGLILA 64
Query: 1833 SDDRFKFTVLDD---YII-IFIKEIRKEDAGDYTVNLSNSSGS--VSGTFTINITGLPGP 1886
+ L + I I K D G Y S +S T + + G
Sbjct: 65 LGMDDRKQQLPNGSLLIQNILHSRHHKPDEGLYQCEASLGDSGSIISRTAKVMVAGPLRF 124
Query: 1887 PIGPLDVSEITKHTCTLH------------WNPPKYDGGLKVTHYVVERRDISMPHWICI 1934
++ T L W + + R + +P
Sbjct: 125 LSQTESITAFMGDTVLLKCEVIGDPMPTIHW----QKNQQDLNPIPGDSRVVVLP----- 175
Query: 1935 STTCHDTTFIVQGLTEGQEYLFHVMAVNENG-----------MGPPLEGINPIKAKSPYD 1983
+ L G ++ A N + P + P +
Sbjct: 176 -----SGALQISRLQPGDSGVYRCSARNPASTRTGNEAEVRILSDPGLHRQLYFLQRPSN 230
Query: 1984 KPSPPGIPVVTQ--VGGD-FVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICA 2040
+ G V + V G + +W + + +++ +
Sbjct: 231 VIAIEGKDAVLECCVSGYPPPSFTWLR--GEEVIQLRSKKYSLLGGSN------------ 276
Query: 2041 PSQINIPNLIE---GRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNA 2097
+ I N+ + G Y + SAS + + P P + N
Sbjct: 277 ---LLISNVTDDDSGT-YT--CVVTYKNENI---SASAELTVLVP-----PWFLNHPSNL 322
Query: 2098 NAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADE 2157
A ++ + +F+C ++G P PT++W+K + PS I L I V D
Sbjct: 323 YAYESMDIEFECAVSGKPVPTVNWMKNGDVVIPSDYFQIVGGS---NLRILGVVKSDEGF 379
Query: 2158 YVCRAVNKGGVKSTKAELII 2177
Y C A N+ G + A+LI+
Sbjct: 380 YQCVAENEAGNAQSSAQLIV 399
Score = 116 bits (292), Expect = 2e-27
Identities = 37/219 (16%), Positives = 85/219 (38%), Gaps = 15/219 (6%)
Query: 89 EKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREIS---SGARYRVETAGGV 145
F+ + + +G + L+CE G P+P W +N ++++ +R V +G
Sbjct: 120 GPLRFLSQTESITAFMGDTVLLKCEVIGDPMPTIHWQKNQQDLNPIPGDSRVVVLPSGA- 178
Query: 146 FRLHFNEVTDVDNGDYTCEAYNSVGFAHTSS-------RVKIGTPPRIDRMPNALYIPEG 198
L + + D+G Y C A N + + + P+ + EG
Sbjct: 179 --LQISRLQPGDSGVYRCSARNPASTRTGNEAEVRILSDPGLHRQLYFLQRPSNVIAIEG 236
Query: 199 DNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNL 258
+ ++ +G P + + V+Q + K+++L ++ I + +D+G YT +
Sbjct: 237 KDAVLECCVSGYPPPSFTWLRGEEVIQLRSK-KYSLLGGSNLL-ISNVTDDDSGTYTCVV 294
Query: 259 SNSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLH 297
+ + ++S + + + P P ++
Sbjct: 295 TYKNENISASAELTVLVPPWFLNHPSNLYAYESMDIEFE 333
Score = 116 bits (292), Expect = 2e-27
Identities = 37/219 (16%), Positives = 85/219 (38%), Gaps = 15/219 (6%)
Query: 1696 EKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREIS---SGARYRVETAGGV 1752
F+ + + +G + L+CE G P+P W +N ++++ +R V +G
Sbjct: 120 GPLRFLSQTESITAFMGDTVLLKCEVIGDPMPTIHWQKNQQDLNPIPGDSRVVVLPSGA- 178
Query: 1753 FRLHFNEVTDVDNGDYTCEAYNSVGFAHTSS-------RVKIGTPPRIDRMPNALYIPEG 1805
L + + D+G Y C A N + + + P+ + EG
Sbjct: 179 --LQISRLQPGDSGVYRCSARNPASTRTGNEAEVRILSDPGLHRQLYFLQRPSNVIAIEG 236
Query: 1806 DNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNL 1865
+ ++ +G P + + V+Q + K+++L ++ I + +D+G YT +
Sbjct: 237 KDAVLECCVSGYPPPSFTWLRGEEVIQLRSK-KYSLLGGSNLL-ISNVTDDDSGTYTCVV 294
Query: 1866 SNSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLH 1904
+ + ++S + + + P P ++
Sbjct: 295 TYKNENISASAELTVLVPPWFLNHPSNLYAYESMDIEFE 333
Score = 111 bits (278), Expect = 1e-25
Identities = 36/234 (15%), Positives = 69/234 (29%), Gaps = 21/234 (8%)
Query: 454 AQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGC-PKPTI 512
+E S + + + +A ++ N C+ P I
Sbjct: 3 WGSELE---SSHHHHHHGGRRS-----LHFVSEPSDAVTMRGGNVLLNCSAESDRGVPVI 54
Query: 513 SWLKGSREITPSARHHIFAEGDTYTLIINSVYGV-----DADEYVCRAVNK--GGVKSTK 565
W K + + +L+I ++ D Y C A G + S
Sbjct: 55 KWKKDGLILALGMDDRKQQLPNG-SLLIQNILHSRHHKPDEGLYQCEASLGDSGSIISRT 113
Query: 566 AELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHV 625
A++++ +F + G+ V++K G P P I W ++ + +
Sbjct: 114 AKVMVAGPLRFLSQTE---SITAFMGDTVLLKCEVIGDPMPTIHWQKNQQDLNPIPGDSR 170
Query: 626 ETSERHAILTIRDASNVDTAPYRVVAENDLGMD-SAIVKIQISDRPDPPQFPTV 678
L I D+ YR A N +++I P +
Sbjct: 171 VVVLPSGALQISRLQPGDSGVYRCSARNPASTRTGNEAEVRILSDPGLHRQLYF 224
Score = 108 bits (271), Expect = 1e-24
Identities = 41/218 (18%), Positives = 72/218 (33%), Gaps = 10/218 (4%)
Query: 89 EKPDFIVPLKDLVVPLGKLLTLQCEATGT-PVPKCRWLRNGREISSGA--RYRVETAGGV 145
F+ D V G + L C A VP +W ++G ++ G R + G +
Sbjct: 20 RSLHFVSEPSDAVTMRGGNVLLNCSAESDRGVPVIKWKKDGLILALGMDDRKQQLPNGSL 79
Query: 146 F--RLHFNEVTDVDNGDYTCEAYNSVGFAHTSS--RVKIGTPPRIDRMPNALYIPEGDNT 201
+ + D G Y CEA + S +V + P R ++ GD
Sbjct: 80 LIQNILHSRHHKPDEGLYQCEASLGDSGSIISRTAKVMVAGPLRFLSQTESITAFMGDTV 139
Query: 202 KVKIFYAGDQPMEVSLTKNGRVVQ-SDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSN 260
+K GD + KN + + + VL + I ++ D+G Y + N
Sbjct: 140 LLKCEVIGDPMPTIHWQKNQQDLNPIPGDSRVVVLPSGALQ-ISRLQPGDSGVYRCSARN 198
Query: 261 SSGS-VSGTFTINITGLPGPPIGPLDVSEITKHTCTLH 297
+ + + I PG + +
Sbjct: 199 PASTRTGNEAEVRILSDPGLHRQLYFLQRPSNVIAIEG 236
Score = 108 bits (271), Expect = 1e-24
Identities = 41/218 (18%), Positives = 72/218 (33%), Gaps = 10/218 (4%)
Query: 1696 EKPDFIVPLKDLVVPLGKLLTLQCEATGT-PVPKCRWLRNGREISSGA--RYRVETAGGV 1752
F+ D V G + L C A VP +W ++G ++ G R + G +
Sbjct: 20 RSLHFVSEPSDAVTMRGGNVLLNCSAESDRGVPVIKWKKDGLILALGMDDRKQQLPNGSL 79
Query: 1753 F--RLHFNEVTDVDNGDYTCEAYNSVGFAHTSS--RVKIGTPPRIDRMPNALYIPEGDNT 1808
+ + D G Y CEA + S +V + P R ++ GD
Sbjct: 80 LIQNILHSRHHKPDEGLYQCEASLGDSGSIISRTAKVMVAGPLRFLSQTESITAFMGDTV 139
Query: 1809 KVKIFYAGDQPMEVSLTKNGRVVQ-SDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSN 1867
+K GD + KN + + + VL + I ++ D+G Y + N
Sbjct: 140 LLKCEVIGDPMPTIHWQKNQQDLNPIPGDSRVVVLPSGALQ-ISRLQPGDSGVYRCSARN 198
Query: 1868 SSGS-VSGTFTINITGLPGPPIGPLDVSEITKHTCTLH 1904
+ + + I PG + +
Sbjct: 199 PASTRTGNEAEVRILSDPGLHRQLYFLQRPSNVIAIEG 236
Score = 100 bits (251), Expect = 3e-22
Identities = 35/144 (24%), Positives = 60/144 (41%), Gaps = 5/144 (3%)
Query: 2061 AQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTIS 2120
A+N A + A + P + + N AI+ +A +C ++G P P+ +
Sbjct: 196 ARNPASTRTGNEAEVRILSD-PGLHRQLYFLQRPSNVIAIEGKDAVLECCVSGYPPPSFT 254
Query: 2121 WLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTA 2180
WL+G I ++ + G L+I++V D+ Y C K S AEL ++
Sbjct: 255 WLRGEEVIQLRSKKYSLLGG--SNLLISNVTDDDSGTYTCVVTYKNENISASAELTVLVP 312
Query: 2181 PKFNVPPRFRDTAYFESDVVVVVC 2204
P F P + +ES + C
Sbjct: 313 PWFLNHP--SNLYAYESMDIEFEC 334
Score = 93.0 bits (231), Expect = 1e-19
Identities = 26/121 (21%), Positives = 43/121 (35%), Gaps = 11/121 (9%)
Query: 63 IAVNAIGKSEPSICTTPVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKC 122
+ S T V P F+ +L + +C +G PVP
Sbjct: 293 VVTYKNENISASAELT-VL-------VPPWFLNHPSNLYAYESMDIEFECAVSGKPVPTV 344
Query: 123 RWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGT 182
W++NG + +++ L V D G Y C A N G A +S+++ +
Sbjct: 345 NWMKNGDVVIPSDYFQIVGGS---NLRILGVVKSDEGFYQCVAENEAGNAQSSAQLIVPK 401
Query: 183 P 183
P
Sbjct: 402 P 402
Score = 93.0 bits (231), Expect = 1e-19
Identities = 26/121 (21%), Positives = 43/121 (35%), Gaps = 11/121 (9%)
Query: 1670 IAVNAIGKSEPSICTTPVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKC 1729
+ S T V P F+ +L + +C +G PVP
Sbjct: 293 VVTYKNENISASAELT-VL-------VPPWFLNHPSNLYAYESMDIEFECAVSGKPVPTV 344
Query: 1730 RWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGT 1789
W++NG + +++ L V D G Y C A N G A +S+++ +
Sbjct: 345 NWMKNGDVVIPSDYFQIVGGS---NLRILGVVKSDEGFYQCVAENEAGNAQSSAQLIVPK 401
Query: 1790 P 1790
P
Sbjct: 402 P 402
Score = 79.9 bits (197), Expect = 2e-15
Identities = 26/126 (20%), Positives = 45/126 (35%), Gaps = 5/126 (3%)
Query: 2085 AKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYT 2144
A + + A +C + G P PTI W K +++ P +
Sbjct: 119 AGPLRFLSQTESITAFMGDTVLLKCEVIGDPMPTIHWQKNQQDLNPIPGDSRVVVLPSGA 178
Query: 2145 LIINSVYGVDADEYVCRAVNKGGVK-STKAELIIMTAPKFNVPPRF----RDTAYFESDV 2199
L I+ + D+ Y C A N + +AE+ I++ P + F + E
Sbjct: 179 LQISRLQPGDSGVYRCSARNPASTRTGNEAEVRILSDPGLHRQLYFLQRPSNVIAIEGKD 238
Query: 2200 VVVVCV 2205
V+ C
Sbjct: 239 AVLECC 244
Score = 71.8 bits (176), Expect = 8e-13
Identities = 23/152 (15%), Positives = 45/152 (29%), Gaps = 19/152 (12%)
Query: 2061 AQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGC-PKPTI 2119
+E S + + + +A ++ N C+ P I
Sbjct: 3 WGSELE---SSHHHHHHGGRRS-----LHFVSEPSDAVTMRGGNVLLNCSAESDRGVPVI 54
Query: 2120 SWLKGSREITPSARHHIFAEGDTYTLIINSVYGV-----DADEYVCRAVNK--GGVKSTK 2172
W K + + +L+I ++ D Y C A G + S
Sbjct: 55 KWKKDGLILALGMDDRKQQLPNG-SLLIQNILHSRHHKPDEGLYQCEASLGDSGSIISRT 113
Query: 2173 AELIIMTAPKFNVPPRFRDTAYFESDVVVVVC 2204
A++++ +F F D V++ C
Sbjct: 114 AKVMVAGPLRFLSQT--ESITAFMGDTVLLKC 143
Score = 62.5 bits (152), Expect = 8e-10
Identities = 21/96 (21%), Positives = 32/96 (33%), Gaps = 6/96 (6%)
Query: 1134 APKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQTI 1193
P + ++ + SG+P PT W NGD V P + N I
Sbjct: 312 PPWFLN--HPSNLYAYESMDIEFECAVSGKPVPTVNWMKNGDVVIPSDYFQIVGGSNLRI 369
Query: 1194 YRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYVVD 1229
+D G Y N G+ +S ++ V
Sbjct: 370 ----LGVVKSDEGFYQCVAENEAGNAQSSAQLIVPK 401
Score = 58.3 bits (141), Expect = 2e-08
Identities = 22/132 (16%), Positives = 50/132 (37%), Gaps = 4/132 (3%)
Query: 1110 AVNAAGQGPWSSSSDIIMCCAPPCAPKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPI 1169
A N A + +++ + P ++ ++ + G++ + SG P P+
Sbjct: 196 ARNPASTRT-GNEAEVRILSDPGLHRQLYFLQRPSNVIAIEGKDAVLECCVSGYPPPSFT 254
Query: 1170 WTVNGDEVSPDGRIKFETSENQTIYRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYVVD 1229
W + + + K+ + + DSG+YT + + SAS ++ V+
Sbjct: 255 WLRGEEVIQLRSK-KYSLLGGSNLLISNV--TDDDSGTYTCVVTYKNENISASAELTVLV 311
Query: 1230 KPSPPQGPLDVS 1241
P P ++
Sbjct: 312 PPWFLNHPSNLY 323
Score = 52.1 bits (125), Expect = 1e-06
Identities = 18/136 (13%), Positives = 38/136 (27%), Gaps = 13/136 (9%)
Query: 554 RAVNKGGVKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVK-IPFTGYPKPKITWYR 612
R ++ + F P A +G NV++ + P I W +
Sbjct: 2 RWGSELESSHHHHHHGGRRSLHFVSEPS---DAVTMRGGNVLLNCSAESDRGVPVIKWKK 58
Query: 613 DNEVIESGGHFHVETSERHAI----LTIRDASNVDTAPYRVVAENDLG--MDSAIVKIQI 666
D ++ G + ++ + D Y+ A + S K+ +
Sbjct: 59 DGLILALGMDDRKQQLPNGSLLIQNILHSRHHKPDEGLYQCEASLGDSGSIISRTAKVMV 118
Query: 667 SDRPD---PPQFPTVE 679
+ + T
Sbjct: 119 AGPLRFLSQTESITAF 134
Score = 51.8 bits (124), Expect = 2e-06
Identities = 31/181 (17%), Positives = 65/181 (35%), Gaps = 27/181 (14%)
Query: 1334 PPGQPQ-IVDWDTNNATLMWDRPRTDGGSKIQGYKMLLKTPTGELPTTIWSKIRPTSSTV 1392
G P + W N L + I G ++ P+G L I S+++P S V
Sbjct: 145 VIGDPMPTIHWQKNQQDL----------NPIPGDSRVVVLPSGAL--QI-SRLQPGDSGV 191
Query: 1393 Y-CKDTTMNSSNSEPGKQSGP----VIVEEQPNKPVMDLSGVRDITVKAGEDFSIHVPFM 1447
Y C ++ N + ++ + ++ + L ++ G+D +
Sbjct: 192 YRC-----SARNPASTRTGNEAEVRILSDPGLHRQLYFLQRPSNVIAIEGKDAVLECCVS 246
Query: 1448 AFPQPAAFWFANDSIIDDSDTRVHKQLTMNSASLVVKNSQRSDGGQYRLQLKNPAGFDTA 1507
+P P+ W + +I + + ++L++ N D G Y + +A
Sbjct: 247 GYPPPSFTWLRGEEVIQLRSKKYS---LLGGSNLLISNVTDDDSGTYTCVVTYKNENISA 303
Query: 1508 T 1508
+
Sbjct: 304 S 304
Score = 49.8 bits (119), Expect = 7e-06
Identities = 18/79 (22%), Positives = 29/79 (36%), Gaps = 1/79 (1%)
Query: 1430 RDITVKAGEDFSIHVPFMAFPQPAAFWFANDSIIDDSDTRVHKQLTMNSASLVVKNSQRS 1489
IT G+ + + P P W N ++ + + + S +L + Q
Sbjct: 129 ESITAFMGDTVLLKCEVIGDPMPTIHWQKNQQDLNPIPGD-SRVVVLPSGALQISRLQPG 187
Query: 1490 DGGQYRLQLKNPAGFDTAT 1508
D G YR +NPA T
Sbjct: 188 DSGVYRCSARNPASTRTGN 206
Score = 49.5 bits (118), Expect = 1e-05
Identities = 18/106 (16%), Positives = 36/106 (33%), Gaps = 6/106 (5%)
Query: 1134 APKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSP-DGRIKFETSENQT 1192
+ S +T G+ + G P PT W N +++P G + +
Sbjct: 121 PLRFLSQT--ESITAFMGDTVLLKCEVIGDPMPTIHWQKNQQDLNPIPGDSRVVVLPSGA 178
Query: 1193 IYRNKSAKRATDSGSYTIQLVNTVGSD-SASCKVYVVDKPSPPQGP 1237
+ ++ + DSG Y N + +V ++ P +
Sbjct: 179 LQISRL--QPGDSGVYRCSARNPASTRTGNEAEVRILSDPGLHRQL 222
Score = 46.8 bits (111), Expect = 7e-05
Identities = 20/104 (19%), Positives = 34/104 (32%), Gaps = 14/104 (13%)
Query: 1408 KQSGPVIVEEQP---NKPVMDLSGVRDITVKAGEDFSIHVPFMAFPQPAAFWFANDSIID 1464
S + V P N P ++ D P P W N ++
Sbjct: 302 SASAELTVLVPPWFLNHP-------SNLYAYESMDIEFECAVSGKPVPTVNWMKNGDVVI 354
Query: 1465 DSDTRVHKQLTMNSASLVVKNSQRSDGGQYRLQLKNPAGFDTAT 1508
SD + ++L + +SD G Y+ +N AG ++
Sbjct: 355 PSD-YFQ---IVGGSNLRILGVVKSDEGFYQCVAENEAGNAQSS 394
Score = 43.3 bits (102), Expect = 7e-04
Identities = 18/104 (17%), Positives = 29/104 (27%), Gaps = 6/104 (5%)
Query: 1134 APKITSDLSIRDMTVLAGEEFTIT-VPFSGRPKPTPIWTVNGDEV--SPDGRIKFETSEN 1190
+ S+ S D + G + S R P W +G + D R + + +
Sbjct: 21 SLHFVSEPS--DAVTMRGGNVLLNCSAESDRGVPVIKWKKDGLILALGMDDRKQQLPNGS 78
Query: 1191 QTIYR-NKSAKRATDSGSYTIQLVNTVGSDSASCKVYVVDKPSP 1233
I S D G Y + S V+
Sbjct: 79 LLIQNILHSRHHKPDEGLYQCEASLGDSGSIISRTAKVMVAGPL 122
Score = 31.3 bits (71), Expect = 4.3
Identities = 14/110 (12%), Positives = 31/110 (28%), Gaps = 15/110 (13%)
Query: 1409 QSGPVIVEEQPNKPVMDLSGVRDITVKAGEDFSIH-VPFMAFPQPAAFWFANDSIIDDSD 1467
+ V E P D G + ++ P W + I+
Sbjct: 19 RRSLHFVSE----P-------SDAVTMRGGNVLLNCSAESDRGVPVIKWKKDGLILALGM 67
Query: 1468 TRVHKQLTMNS---ASLVVKNSQRSDGGQYRLQLKNPAGFDTATLHSRLR 1514
+QL S +++ + D G Y+ + + +++
Sbjct: 68 DDRKQQLPNGSLLIQNILHSRHHKPDEGLYQCEASLGDSGSIISRTAKVM 117
>2yux_A Myosin-binding protein C, SLOW-type; fibronectin III domain,
structural genomics., NPPSFA; NMR {Homo sapiens}
Length = 120
Score = 138 bits (349), Expect = 4e-38
Identities = 36/122 (29%), Positives = 59/122 (48%), Gaps = 7/122 (5%)
Query: 1217 GSDSASCKVYVVDKPSPPQGPLDVSDITPESCSLSWKPPLDDGGSPITNYVVEKYESATG 1276
GS AS + ++D+P PPQ + + D+ E+ +L+W PP DDG + IT Y ++K + +
Sbjct: 4 GSSGASIDIQIIDRPGPPQ-IVKIEDVWGENVALTWTPPKDDGNAAITGYTIQKADKKSM 62
Query: 1277 FWSKLSSFVRSPAYDVFGLETNRQYRFRVRAENQYGVSEPLELDNSITAKFPFTVPDPPG 1336
W + + + L +Y FRV +EN G+SE + K V G
Sbjct: 63 EWFTVIEHYHRTSATITELVIGNEYYFRVFSENMCGLSED-----ATMTK-ESAVIARDG 116
Query: 1337 QP 1338
+
Sbjct: 117 KI 118
Score = 128 bits (324), Expect = 1e-34
Identities = 39/109 (35%), Positives = 59/109 (54%), Gaps = 1/109 (0%)
Query: 656 GMDSAIVKIQISDRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSS 715
G A + IQI DRP PPQ +ED+ +++AL W P DG + IT Y ++K +
Sbjct: 4 GSSGASIDIQIIDRPGPPQIVKIEDVWGENVALTWTPPKDDGNAAITGYTIQKADKKSME 63
Query: 716 WIRVG-NTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTK 763
W V + T+ IT L G++Y FRV++EN+ G S+ +T +
Sbjct: 64 WFTVIEHYHRTSATITELVIGNEYYFRVFSENMCGLSEDATMTKESAVI 112
Score = 126 bits (319), Expect = 5e-34
Identities = 35/103 (33%), Positives = 56/103 (54%), Gaps = 2/103 (1%)
Query: 898 VLDRPHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTKVSSYVTT 957
++DRP PP+ + ++ G+++ L WTPP+D+G + IT Y ++K D S W V +
Sbjct: 14 IIDRPGPPQIVKIEDVWGENVALTWTPPKDDGNAAITGYTIQKADKKSMEWFTVIEHYHR 73
Query: 958 PFVRVRNLAIGSTYEFRVMAENQYGLSKPALTIDP--IKAKHP 998
+ L IG+ Y FRV +EN GLS+ A + A+
Sbjct: 74 TSATITELVIGNEYYFRVFSENMCGLSEDATMTKESAVIARDG 116
Score = 125 bits (315), Expect = 2e-33
Identities = 32/118 (27%), Positives = 47/118 (39%), Gaps = 1/118 (0%)
Query: 261 SSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDIS 320
SSGS + I I PGPP + + ++ L W PPK DG +T Y +++ D
Sbjct: 2 SSGSSGASIDIQIIDRPGPP-QIVKIEDVWGENVALTWTPPKDDGNAAITGYTIQKADKK 60
Query: 321 MPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKP 378
W + H T+ + L G EY F V + N G+ + K
Sbjct: 61 SMEWFTVIEHYHRTSATITELVIGNEYYFRVFSENMCGLSEDATMTKESAVIARDGKI 118
Score = 125 bits (315), Expect = 2e-33
Identities = 32/118 (27%), Positives = 47/118 (39%), Gaps = 1/118 (0%)
Query: 1868 SSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDIS 1927
SSGS + I I PGPP + + ++ L W PPK DG +T Y +++ D
Sbjct: 2 SSGSSGASIDIQIIDRPGPP-QIVKIEDVWGENVALTWTPPKDDGNAAITGYTIQKADKK 60
Query: 1928 MPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKP 1985
W + H T+ + L G EY F V + N G+ + K
Sbjct: 61 SMEWFTVIEHYHRTSATITELVIGNEYYFRVFSENMCGLSEDATMTKESAVIARDGKI 118
Score = 109 bits (274), Expect = 7e-28
Identities = 36/108 (33%), Positives = 53/108 (49%), Gaps = 5/108 (4%)
Query: 376 DKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPS 435
D+P PP I + V G+ V L+W P DDG + I GY I K + S W V S
Sbjct: 16 DRPGPPQIVKIEDVWGENVALTWTPPKDDGNAAITGYTIQKADKKSMEWFTVIEHYHRTS 75
Query: 436 QINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEI 483
I L+ G +Y FRV+++N GLS ++ + + A+ +I
Sbjct: 76 -ATITELVIGNEYYFRVFSENMCGLSEDATMTKESAVI----ARDGKI 118
Score = 109 bits (274), Expect = 7e-28
Identities = 36/108 (33%), Positives = 53/108 (49%), Gaps = 5/108 (4%)
Query: 1983 DKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPS 2042
D+P PP I + V G+ V L+W P DDG + I GY I K + S W V S
Sbjct: 16 DRPGPPQIVKIEDVWGENVALTWTPPKDDGNAAITGYTIQKADKKSMEWFTVIEHYHRTS 75
Query: 2043 QINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEI 2090
I L+ G +Y FRV+++N GLS ++ + + A+ +I
Sbjct: 76 -ATITELVIGNEYYFRVFSENMCGLSEDATMTKESAVI----ARDGKI 118
Score = 94.0 bits (234), Expect = 1e-22
Identities = 28/133 (21%), Positives = 45/133 (33%), Gaps = 33/133 (24%)
Query: 1000 DVPGAPGAPKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDT 1059
D PG P K D ++++L W+ P+ DG + I Y ++K +W H T
Sbjct: 16 DRPGPPQIVKIEDVWGENVALTWTPPKDDGNAAITGYTIQKADKKSMEWFTVI-EHYHRT 74
Query: 1060 SLKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPW 1119
S +T L+ +EY FRV + N G
Sbjct: 75 SAT--------------------------------ITELVIGNEYYFRVFSENMCGLSED 102
Query: 1120 SSSSDIIMCCAPP 1132
++ + A
Sbjct: 103 ATMTKESAVIARD 115
Score = 82.8 bits (205), Expect = 1e-18
Identities = 23/131 (17%), Positives = 42/131 (32%), Gaps = 46/131 (35%)
Query: 1559 VDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEG 1618
D ++++L W+ P+ DG + I Y ++K
Sbjct: 27 EDVWGENVALTWTPPKDDGNAAITGYTIQKA----------------------------- 57
Query: 1619 KSIGSERGSTAQFLEREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKS 1678
+ W + + S ++ LV GN+Y FR+ + N G S
Sbjct: 58 ----------------DKKSMEWFTVIE-HYHRTSATITELVIGNEYYFRVFSENMCGLS 100
Query: 1679 EPSICTTPVKI 1689
E + T +
Sbjct: 101 EDATMTKESAV 111
Score = 73.6 bits (181), Expect = 2e-15
Identities = 16/62 (25%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Query: 21 CYIIERREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPSICTTPV 80
Y I++ + W + + S ++ LV GN+Y FR+ + N G SE + T
Sbjct: 51 GYTIQKADKKSMEWFTVIE-HYHRTSATITELVIGNEYYFRVFSENMCGLSEDATMTKES 109
Query: 81 KI 82
+
Sbjct: 110 AV 111
Score = 55.1 bits (133), Expect = 7e-09
Identities = 22/105 (20%), Positives = 34/105 (32%), Gaps = 14/105 (13%)
Query: 1331 VPDPPGQPQIVDWDTNNATLMWDRPRTDGGSKIQGYKMLLKTPTGELPTTIWSKIRPTSS 1390
P PP +I D N L W P+ DG + I GY + T+ TS+
Sbjct: 17 RPGPPQIVKIEDVWGENVALTWTPPKDDGNAAITGYTIQKADKKSMEWFTVIEHYHRTSA 76
Query: 1391 TVYCKDTTMNSS------------NSEPGKQSGPVIVEEQPNKPV 1423
T+ + + + SE + V + K
Sbjct: 77 TI--TELVIGNEYYFRVFSENMCGLSEDATMTKESAVIARDGKIY 119
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer,
transferase, serine/threonine-protein kinase,
nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Length = 373
Score = 146 bits (371), Expect = 6e-38
Identities = 44/156 (28%), Positives = 65/156 (41%), Gaps = 7/156 (4%)
Query: 749 GRSDPSTTSDLITTKDTFKKQIKKRQYDFDETGKKIRGKADEKVSDYDQYVFDIYSKYVP 808
G + + K++ + + + E V + P
Sbjct: 11 GVDLGTENLYFQSMKNSGDQDSRSGHNEAKEVWSNADLTERMPVKSKRTSALAVDIPAPP 70
Query: 809 QP-----VDIKTSSVYDHYDI--LEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEK 861
P V K +V Y + E +G G FG VH+C E TG AAK I +K
Sbjct: 71 APFDHRIVTAKQGAVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDK 130
Query: 862 ELIRKEIDIMNQLHHPKLINLHDAFEDDDEMVLIFE 897
E ++ EI +MNQL H LI L+DAFE +++VL+ E
Sbjct: 131 EEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVME 166
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical
bundle cytokine, hematopoietic cytokine-receptor
complex, cell surface, EXTR complex; 7.80A {Homo
sapiens}
Length = 527
Score = 149 bits (376), Expect = 2e-37
Identities = 62/537 (11%), Positives = 132/537 (24%), Gaps = 82/537 (15%)
Query: 71 SEPSICTTPVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGRE 130
S P + +P + + + + + V + +TLQ C W+
Sbjct: 29 SYPMVSESPEDLGCALRPQSSGTVYEAAAVEVDVSASITLQVLVDAPGNISCLWVFKHSS 88
Query: 131 ISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMP 190
++ + ++ GV + ++T+ G+Y + V I
Sbjct: 89 LNCQPHFDLQN-RGVVSMVILKMTETQAGEYLLFIQSEATNYTILFTVSIRNTLLYTLRR 147
Query: 191 NALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKED 250
E + + V +S V+ + + +
Sbjct: 148 PYFRKMENQDA-LVCISESVPEPIVEWVLCDSQGESCKEESPAVVKKEEKV----LHELF 202
Query: 251 AGDYTVNLSNSSG-SVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKV 309
D N G + FTI++ P + L + + + G +
Sbjct: 203 GTDIRCCARNELGRECTRLFTIDLNQTPQTTLPQLFLKV--GEPLWIRCKAVHVNHGFGL 260
Query: 310 T-----HYVVERRDISMPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLE 364
T + E M + T V + + + +
Sbjct: 261 TWELENKALEEGNYFEMSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSSKHPSQSALVT 320
Query: 365 GINPIKAKSPYDKPSPPGIPVVTQVGGDFV-----------NLSW---DKPLDDGGSRIQ 410
I K + + +F +W K +
Sbjct: 321 ----IVEK-GFINATNSSEDYEIDQYEEFCFSVRFKAYPQIRCTWTFSRKSFPCEQKGLD 375
Query: 411 GYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSV 470
I+ + + E+ +A+N+ + ++
Sbjct: 376 NG----------------------YSISKFCNHKHQPGEYIFHAENDDA---QFTKMFTL 410
Query: 471 QIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKG-------SREITP 523
I+ P+++ + +Q C G P P+ +W K + EIT
Sbjct: 411 NIRRK-----PQVLA--------EASASQASCFSDGYPLPSWTWKKCSDKSPNCTEEITE 457
Query: 524 SARHHI----FAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKF 576
+ + +N + C A N G L F
Sbjct: 458 GVWNRKANRKVFGQWVSSSTLNMSEAIKGFLVKCCAYNSLGTSCETILLNSPGPFPF 514
Score = 149 bits (376), Expect = 2e-37
Identities = 62/537 (11%), Positives = 132/537 (24%), Gaps = 82/537 (15%)
Query: 1678 SEPSICTTPVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGRE 1737
S P + +P + + + + + V + +TLQ C W+
Sbjct: 29 SYPMVSESPEDLGCALRPQSSGTVYEAAAVEVDVSASITLQVLVDAPGNISCLWVFKHSS 88
Query: 1738 ISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMP 1797
++ + ++ GV + ++T+ G+Y + V I
Sbjct: 89 LNCQPHFDLQN-RGVVSMVILKMTETQAGEYLLFIQSEATNYTILFTVSIRNTLLYTLRR 147
Query: 1798 NALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKED 1857
E + + V +S V+ + + +
Sbjct: 148 PYFRKMENQDA-LVCISESVPEPIVEWVLCDSQGESCKEESPAVVKKEEKV----LHELF 202
Query: 1858 AGDYTVNLSNSSG-SVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKV 1916
D N G + FTI++ P + L + + + G +
Sbjct: 203 GTDIRCCARNELGRECTRLFTIDLNQTPQTTLPQLFLKV--GEPLWIRCKAVHVNHGFGL 260
Query: 1917 T-----HYVVERRDISMPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLE 1971
T + E M + T V + + + +
Sbjct: 261 TWELENKALEEGNYFEMSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSSKHPSQSALVT 320
Query: 1972 GINPIKAKSPYDKPSPPGIPVVTQVGGDFV-----------NLSW---DKPLDDGGSRIQ 2017
I K + + +F +W K +
Sbjct: 321 ----IVEK-GFINATNSSEDYEIDQYEEFCFSVRFKAYPQIRCTWTFSRKSFPCEQKGLD 375
Query: 2018 GYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSV 2077
I+ + + E+ +A+N+ + ++
Sbjct: 376 NG----------------------YSISKFCNHKHQPGEYIFHAENDDA---QFTKMFTL 410
Query: 2078 QIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKG-------SREITP 2130
I+ P+++ + +Q C G P P+ +W K + EIT
Sbjct: 411 NIRRK-----PQVLA--------EASASQASCFSDGYPLPSWTWKKCSDKSPNCTEEITE 457
Query: 2131 SARHHI----FAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKF 2183
+ + +N + C A N G L F
Sbjct: 458 GVWNRKANRKVFGQWVSSSTLNMSEAIKGFLVKCCAYNSLGTSCETILLNSPGPFPF 514
Score = 147 bits (372), Expect = 6e-37
Identities = 58/553 (10%), Positives = 136/553 (24%), Gaps = 86/553 (15%)
Query: 151 NEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGD 210
N+ + + Y + + ++ + + A+ + + +++
Sbjct: 20 NDSSVGKSSSYPMVSESPED---LGCALRPQSSGTV-YEAAAVEVDVSASITLQVLVDAP 75
Query: 211 QPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFT 270
+ + F + + I ++ + AG+Y + + + + + + FT
Sbjct: 76 GNISCLWVFKHSSLNCQPHFDLQ-NRGVVSMVILKMTETQAGEYLLFIQSEATNYTILFT 134
Query: 271 INITGLPGPPIGPLDVSEITKHT---CTLHWNPPKYDGGLKVTHYVVERRDISMPHWICI 327
++I + ++ C P V + + + S
Sbjct: 135 VSIRNTLLYTLRRPYFRKMENQDALVCISESVPE-----PIVEWVLCDSQGESCKEESPA 189
Query: 328 STTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVT 387
++ L A NE G + P +
Sbjct: 190 VVK--KEEKVLHELFGTD---IRCCARNELG-----RECTRLFTIDLNQTPQTTLPQLFL 239
Query: 388 QVGGDF------------VNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPS 435
+VG L+W+ +++ + N +
Sbjct: 240 KVGEPLWIRCKAVHVNHGFGLTWELE---------NKALEEGNYFEMSTYSTNRTMIRIL 290
Query: 436 QINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNAN--AI 493
+ ++ + + S V I + I + +
Sbjct: 291 FAFVSSVARNDTGYYTCSSSKHPS------QSALVTIVEK-----GFINATNSSEDYEID 339
Query: 494 QNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVC 553
Q F P+ +W + + + Y++ + EY+
Sbjct: 340 QYEEFCFSVRFKAYPQIRCTWTFSRKSFPCEQKGLD----NGYSISKFCNHKHQPGEYIF 395
Query: 554 RAVNKGGVKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYR- 612
A N + L I P+ + GYP P TW +
Sbjct: 396 HAENDDAQFTKMFTLNI------RRKPQV-----LAEASASQASCFSDGYPLPSWTWKKC 444
Query: 613 -------DNEVIESGGHFHVETSERHAI---LTIRDASNVDTAPYRVVAENDLGMDSAIV 662
E+ E + T+ + + + A N LG +
Sbjct: 445 SDKSPNCTEEITEGVWNRKANRKVFGQWVSSSTLNMSEAIKGFLVKCCAYNSLGTSCETI 504
Query: 663 KIQISDRPDPPQF 675
+ P P F
Sbjct: 505 LLNS---PGPFPF 514
Score = 115 bits (290), Expect = 1e-26
Identities = 36/309 (11%), Positives = 92/309 (29%), Gaps = 21/309 (6%)
Query: 454 AQNEAGLSLPSS----ASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPK 509
N++ + SS + + + + ++ + + + Q +
Sbjct: 18 KNNDSSVGKSSSYPMVSESPEDLGCALRPQSSGTVYEAAAVEVDVSASITLQVLVDAPGN 77
Query: 510 PTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELI 569
+ W+ + + G +++I + A EY+ ++ + +
Sbjct: 78 ISCLWVFKHSSLNCQPHFDLQNRGVV-SMVILKMTETQAGEYLLFIQSEATNYTILFTVS 136
Query: 570 IMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSE 629
I + + + + P+P + W + ES E S
Sbjct: 137 IRNTLLYTLRRPYFRKM----ENQDALVCISESVPEPIVEWVLCDSQGESCK----EESP 188
Query: 630 RHAILTIRDASNVDTAPYRVVAENDLG-MDSAIVKIQISDRPDPPQFPTVEDIGHDSLAL 688
+ + R A N+LG + + I ++ P +G + L +
Sbjct: 189 AVVKKEEKVLHELFGTDIRCCARNELGRECTRLFTIDLNQTPQTTLPQLFLKVG-EPLWI 247
Query: 689 VWRAPIWDGGSNIT----NYIVEKREHPMSSWIRVGNT--RFTTMAITGLSPGHQYEFRV 742
+A + G +T N +E+ + S T R ++ ++ +
Sbjct: 248 RCKAVHVNHGFGLTWELENKALEEGNYFEMSTYSTNRTMIRILFAFVSSVARNDTGYYTC 307
Query: 743 YAENVYGRS 751
+ +S
Sbjct: 308 SSSKHPSQS 316
Score = 114 bits (286), Expect = 4e-26
Identities = 42/448 (9%), Positives = 110/448 (24%), Gaps = 61/448 (13%)
Query: 1758 NEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGD 1817
N+ + + Y + + ++ + + A+ + + +++
Sbjct: 20 NDSSVGKSSSYPMVSESPED---LGCALRPQSSGTV-YEAAAVEVDVSASITLQVLVDAP 75
Query: 1818 QPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFT 1877
+ + F + + I ++ + AG+Y + + + + + + FT
Sbjct: 76 GNISCLWVFKHSSLNCQPHFDLQ-NRGVVSMVILKMTETQAGEYLLFIQSEATNYTILFT 134
Query: 1878 INITGLPGPPIGPLDVSEITKHT---CTLHWNPPKYDGGLKVTHYVVERRDISMPHWICI 1934
++I + ++ C P V + + + S
Sbjct: 135 VSIRNTLLYTLRRPYFRKMENQDALVCISESVPE-----PIVEWVLCDSQGESCKEESPA 189
Query: 1935 STTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVT 1994
++ L A NE G + P +
Sbjct: 190 VVK--KEEKVLHELFGTD---IRCCARNELG-----RECTRLFTIDLNQTPQTTLPQLFL 239
Query: 1995 QVGGDF------------VNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPS 2042
+VG L+W+ +++ + N +
Sbjct: 240 KVGEPLWIRCKAVHVNHGFGLTWELE---------NKALEEGNYFEMSTYSTNRTMIRIL 290
Query: 2043 QINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNAN--AI 2100
+ ++ + + S V I + I + +
Sbjct: 291 FAFVSSVARNDTGYYTCSSSKHPS------QSALVTIVEK-----GFINATNSSEDYEID 339
Query: 2101 QNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVC 2160
Q F P+ +W + + + Y++ + EY+
Sbjct: 340 QYEEFCFSVRFKAYPQIRCTWTFSRKSFPCEQKGLD----NGYSISKFCNHKHQPGEYIF 395
Query: 2161 RAVNKGGVKSTKAELIIMTAPKFNVPPR 2188
A N + L I P+
Sbjct: 396 HAENDDAQFTKMFTLNIRRKPQVLAEAS 423
Score = 110 bits (277), Expect = 6e-25
Identities = 41/250 (16%), Positives = 78/250 (31%), Gaps = 25/250 (10%)
Query: 37 CNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPSICTTPVKICEFVGGEKPDFIVP 96
C + + L E + R A N +G+ + T +
Sbjct: 183 CKEESPAVVKKEEKVLHELFGTDIRCCARNELGRECTRLFTIDLN---------QTPQTT 233
Query: 97 LKDLVVPLGKLLTLQCEATG-TPVPKCRWLRNGREISSGARYRVETAGGVFR------LH 149
L L + +G+ L ++C+A W + + G + + T
Sbjct: 234 LPQLFLKVGEPLWIRCKAVHVNHGFGLTWELENKALEEGNYFEMSTYSTNRTMIRILFAF 293
Query: 150 FNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMPN--ALYIPEGDNTKVKIFY 207
+ V D G YTC + S+ V I I+ + I + + + +
Sbjct: 294 VSSVARNDTGYYTCSSSKHPS---QSALVTIVEKGFINATNSSEDYEIDQYEEFCFSVRF 350
Query: 208 AGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSG 267
+ + T + + + + LD+ I K G+Y + N +
Sbjct: 351 KAYPQIRCTWTFSRKSFPCEQK----GLDNGYSISKFCNHKHQPGEYIFHAENDDAQFTK 406
Query: 268 TFTINITGLP 277
FT+NI P
Sbjct: 407 MFTLNIRRKP 416
Score = 110 bits (277), Expect = 6e-25
Identities = 41/250 (16%), Positives = 78/250 (31%), Gaps = 25/250 (10%)
Query: 1644 CNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPSICTTPVKICEFVGGEKPDFIVP 1703
C + + L E + R A N +G+ + T +
Sbjct: 183 CKEESPAVVKKEEKVLHELFGTDIRCCARNELGRECTRLFTIDLN---------QTPQTT 233
Query: 1704 LKDLVVPLGKLLTLQCEATG-TPVPKCRWLRNGREISSGARYRVETAGGVFR------LH 1756
L L + +G+ L ++C+A W + + G + + T
Sbjct: 234 LPQLFLKVGEPLWIRCKAVHVNHGFGLTWELENKALEEGNYFEMSTYSTNRTMIRILFAF 293
Query: 1757 FNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMPN--ALYIPEGDNTKVKIFY 1814
+ V D G YTC + S+ V I I+ + I + + + +
Sbjct: 294 VSSVARNDTGYYTCSSSKHPS---QSALVTIVEKGFINATNSSEDYEIDQYEEFCFSVRF 350
Query: 1815 AGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSG 1874
+ + T + + + + LD+ I K G+Y + N +
Sbjct: 351 KAYPQIRCTWTFSRKSFPCEQK----GLDNGYSISKFCNHKHQPGEYIFHAENDDAQFTK 406
Query: 1875 TFTINITGLP 1884
FT+NI P
Sbjct: 407 MFTLNIRRKP 416
Score = 102 bits (255), Expect = 3e-22
Identities = 52/408 (12%), Positives = 100/408 (24%), Gaps = 49/408 (12%)
Query: 1120 SSSSDIIMCCAPPCAPKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSP 1179
S S + + C P + + + V T+ V + +W ++
Sbjct: 34 SESPEDLGCALRPQSSGTVYEA--AAVEVDVSASITLQVLVDAPGNISCLWVFKHSSLNC 91
Query: 1180 DGRIKFETSENQTIYRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYVVDKPSPPQGPLD 1239
+ ++ K T +G Y + + + + + V + +
Sbjct: 92 QPHFDLQNRGVVSMVILKM--TETQAGEYLLFIQSEATNYTILFTVSIRNTLLYTLRR-- 147
Query: 1240 VSDITPESCSLSWKPPLDDGGSPITNYVVEKYESATGFWSKLSSFVRSPAYDVFGLETNR 1299
+ + P +S + S V V
Sbjct: 148 -PYFRKMENQDALVCISE--SVPEPIVEWVLCDSQGESCKEESPAVVKKEEKVLHELFGT 204
Query: 1300 QYRFRVRAENQYGVSEPLELDNSITAKFPFTVPD---------------PPGQPQI-VDW 1343
R A N+ G + T+P + W
Sbjct: 205 DI--RCCARNELGRECTRLFTIDLNQTPQTTLPQLFLKVGEPLWIRCKAVHVNHGFGLTW 262
Query: 1344 DTNNATLMWDRPRTDGGSKIQGYKMLLKTPTGELPTTIWSKIRPTSSTVY-CKDTTMNSS 1402
+ N L + + S + + Y C +SS
Sbjct: 263 ELENKAL----EEGNYFEMSTYSTNRTMIRILFA--FV-SSVARNDTGYYTC-----SSS 310
Query: 1403 NSEPGKQSGPVIVEEQPNKPVMDLSGVRDITVKAGEDFSIHVPFMAFPQPAAFWFANDSI 1462
QS V + E+ + S D + E+F V F A+PQ W +
Sbjct: 311 KHP--SQSALVTIVEKGFINATNSS--EDYEIDQYEEFCFSVRFKAYPQIRCTWTFSRKS 366
Query: 1463 IDDSDTRVHKQLTMNSASLVVKNSQRSDGGQYRLQLKNPAGFDTATLH 1510
+ N S+ + + G+Y +N T
Sbjct: 367 FPCEQKGLD-----NGYSISKFCNHKHQPGEYIFHAENDDAQFTKMFT 409
Score = 79.7 bits (196), Expect = 4e-15
Identities = 13/149 (8%), Positives = 44/149 (29%), Gaps = 8/149 (5%)
Query: 2061 AQNEAGLSLPSS----ASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPK 2116
N++ + SS + + + + ++ + + + Q +
Sbjct: 18 KNNDSSVGKSSSYPMVSESPEDLGCALRPQSSGTVYEAAAVEVDVSASITLQVLVDAPGN 77
Query: 2117 PTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELI 2176
+ W+ + + G +++I + A EY+ ++ + +
Sbjct: 78 ISCLWVFKHSSLNCQPHFDLQNRGVV-SMVILKMTETQAGEYLLFIQSEATNYTILFTVS 136
Query: 2177 IMTAPKFNVPPRFRDTAYFESDVVVVVCV 2205
I + + + +VC+
Sbjct: 137 IRNTLLYTLRR---PYFRKMENQDALVCI 162
Score = 70.1 bits (171), Expect = 4e-12
Identities = 34/213 (15%), Positives = 57/213 (26%), Gaps = 20/213 (9%)
Query: 1135 PKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQTIY 1194
I + S D + EEF +V F P+ WT + P + + + + +
Sbjct: 325 GFINATNSSEDYEIDQYEEFCFSVRFKAYPQIRCTWTFSRKSF-PCEQKGLDNGYSISKF 383
Query: 1195 RNKSAKRATDSGSYTIQLVNTVGSDSASCKVYVVDKPSPPQGPLDVSDITPESCSLSWKP 1254
N G Y N + + + KP SC P
Sbjct: 384 CNH----KHQPGEYIFHAENDDAQFTKMFTLNIRRKPQVLAEASASQ----ASCFSDGYP 435
Query: 1255 P-------LDDGGSPITNYVVEKYESATGFWSKLSSFVRSPAYDVFGLETNRQYRFRVRA 1307
D T + E + +V S ++ + A
Sbjct: 436 LPSWTWKKCSDKSPNCTEEITEGVWNRKANRKVFGQWVSSSTLNMSEAIKGFLV--KCCA 493
Query: 1308 ENQYGVSEPLELDNSITAKFPFTVPDPPGQPQI 1340
N G S + + FPF + D +
Sbjct: 494 YNSLGTSCE-TILLNSPGPFPF-IQDGGTKHHH 524
Score = 60.1 bits (145), Expect = 5e-09
Identities = 18/146 (12%), Positives = 43/146 (29%), Gaps = 18/146 (12%)
Query: 2060 YAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTI 2119
+ Q+EA + +V I++ + ++N +A C P+P +
Sbjct: 121 FIQSEAT---NYTILFTVSIRNT-----LLYTLRRPYFRKMENQDA-LVCISESVPEPIV 171
Query: 2120 SWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGG-VKSTKAELIIM 2178
W+ + ++ C A N+ G + + +
Sbjct: 172 EWVLCDSQGESCKEESPAVVKKEEKVLHELFGTD----IRCCARNELGRECTRLFTIDLN 227
Query: 2179 TAPKFNVPPRFRDTAYFESDVVVVVC 2204
P+ +P + + + C
Sbjct: 228 QTPQTTLP----QLFLKVGEPLWIRC 249
Score = 53.5 bits (128), Expect = 6e-07
Identities = 21/108 (19%), Positives = 32/108 (29%), Gaps = 12/108 (11%)
Query: 101 VVPLGKLLTLQCEATGTPVPKCRWLR-------NGREISSGARYRVETAG----GVFRLH 149
V+ C + G P+P W + EI+ G R V
Sbjct: 418 VLAEASASQASCFSDGYPLPSWTWKKCSDKSPNCTEEITEGVWNRKANRKVFGQWVSSST 477
Query: 150 FNEVTDVDNGDYTCEAYNSVGFAHTSSRVKI-GTPPRIDRMPNALYIP 196
N + C AYNS+G + + + G P I +
Sbjct: 478 LNMSEAIKGFLVKCCAYNSLGTSCETILLNSPGPFPFIQDGGTKHHHH 525
Score = 53.5 bits (128), Expect = 6e-07
Identities = 21/108 (19%), Positives = 32/108 (29%), Gaps = 12/108 (11%)
Query: 1708 VVPLGKLLTLQCEATGTPVPKCRWLR-------NGREISSGARYRVETAG----GVFRLH 1756
V+ C + G P+P W + EI+ G R V
Sbjct: 418 VLAEASASQASCFSDGYPLPSWTWKKCSDKSPNCTEEITEGVWNRKANRKVFGQWVSSST 477
Query: 1757 FNEVTDVDNGDYTCEAYNSVGFAHTSSRVKI-GTPPRIDRMPNALYIP 1803
N + C AYNS+G + + + G P I +
Sbjct: 478 LNMSEAIKGFLVKCCAYNSLGTSCETILLNSPGPFPFIQDGGTKHHHH 525
Score = 50.5 bits (120), Expect = 6e-06
Identities = 23/143 (16%), Positives = 42/143 (29%), Gaps = 10/143 (6%)
Query: 1389 SSTVYCKDTTMNSSNSEPGKQSGPVIVEEQPNKPVMDLSGV--------RDITVKAGEDF 1440
+ C +++S GK S +V E P L + V
Sbjct: 7 LPVIKCVLINHKNNDSSVGKSSSYPMVSESPEDLGCALRPQSSGTVYEAAAVEVDVSASI 66
Query: 1441 SIHVPFMAFPQPAAFWFANDSIIDDSDTRVHKQLTMNSASLVVKNSQRSDGGQYRLQLKN 1500
++ V A + W S ++ S+V+ + G+Y L +++
Sbjct: 67 TLQVLVDAPGNISCLWVFKHSSLNCQPH--FDLQNRGVVSMVILKMTETQAGEYLLFIQS 124
Query: 1501 PAGFDTATLHSRLRTLPDSVNPR 1523
A T +R R
Sbjct: 125 EATNYTILFTVSIRNTLLYTLRR 147
Score = 45.5 bits (107), Expect = 2e-04
Identities = 12/108 (11%), Positives = 23/108 (21%), Gaps = 10/108 (9%)
Query: 1148 VLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQTIYRNKSAK------- 1200
+ + G P P+ W D+ E N+ R +
Sbjct: 419 LAEASASQASCFSDGYPLPSWTWKKCSDKSPNCTEEITEGVWNRKANRKVFGQWVSSSTL 478
Query: 1201 ---RATDSGSYTIQLVNTVGSDSASCKVYVVDKPSPPQGPLDVSDITP 1245
A N++G+ + + Q
Sbjct: 479 NMSEAIKGFLVKCCAYNSLGTSCETILLNSPGPFPFIQDGGTKHHHHH 526
Score = 43.1 bits (101), Expect = 9e-04
Identities = 51/510 (10%), Positives = 114/510 (22%), Gaps = 109/510 (21%)
Query: 1064 VLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPWSSSS 1123
LWV + S+ + Q ++ M I + E E+ + + A +
Sbjct: 80 CLWVFKHSSLNCQPHFDLQNRGVVSMVILK----MTETQAGEYLLFIQSEATNY--TILF 133
Query: 1124 DIIMCCAPPCAPKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRI 1183
+ + T + + P+P W + +
Sbjct: 134 TVSI----RNTLLYTLRRPY---FRKMENQDALVCISESVPEPIVEWVLCDSQGESCKEE 186
Query: 1184 KFETSENQTIYRNKSAKRATDSGSYTIQLVNTVGSD-SASCKVYVVDKPSPPQGPLDV-- 1240
+ + ++ N +G + + + + P L +
Sbjct: 187 SPAVVKKEEKVLHEL-----FGTDIRCCARNELGRECTRLFTIDLNQTPQTTLPQLFLKV 241
Query: 1241 ----------SDITPESCSLSWKPPLDDGGSPITNYVVEKYESATGFWSKLSSFVRSPAY 1290
+ L+W+ L++ NY S ++
Sbjct: 242 GEPLWIRCKAVHVNHGF-GLTWE--LENKALEEGNYFEMSTYSTNRTMIRILFAF----- 293
Query: 1291 DVFGLETNRQYRFRVRAENQYGVSEPLELDNSITAKFPFTVPDPPGQPQIVDWDTNNATL 1350
V + N + + S + +I K F + +D
Sbjct: 294 -VSSVARNDTGYYTCSSSKHPSQSALV----TIVEK-GFINATNSSEDYEIDQYEE-FCF 346
Query: 1351 MWDRPRTDGGSKIQGYKMLLKTPTGELPTTIWSKIR---PTSSTVYCKDTTM---NSSNS 1404
+ + Y P W+ R P ++ +
Sbjct: 347 S---------VRFKAY------PQ---IRCTWTFSRKSFPCEQKGLDNGYSISKFCNHKH 388
Query: 1405 EPG-------------KQSGPVIVEEQPNKPVMDLSGVRDITVKAGEDFSIHVPFMAFPQ 1451
+PG + + + +P + +P
Sbjct: 389 QPGEYIFHAENDDAQFTKMFTLNIRRKP------------QVLAEASASQASCFSDGYPL 436
Query: 1452 PAAFWFANDSIIDDSDTRV----------HKQLTMNSASLVVKNSQRSDGGQYRLQLKNP 1501
P+ W + + K +S + S+ G + N
Sbjct: 437 PSWTWKKCSDKSPNCTEEITEGVWNRKANRKVFGQWVSSSTLNMSEAIKGFLVKCCAYNS 496
Query: 1502 AGFDTATL----HSRLRTLPDSVNPRCHLP 1527
G T+ + D H
Sbjct: 497 LGTSCETILLNSPGPFPFIQDGGTKHHHHH 526
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation,
immunoglobulin domain, IG, membrane, homphilic,
glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB:
2xy2_A* 2vaj_A
Length = 189
Score = 138 bits (350), Expect = 2e-37
Identities = 36/188 (19%), Positives = 62/188 (32%), Gaps = 5/188 (2%)
Query: 480 APEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLI 539
++ + L + F CT G P+ + +I + R + EG L
Sbjct: 2 LLQVTISLSKVELSVGESKFFTCTAIGEPESIDWYNPQGEKIISTQRVVVQKEGVRSRLT 61
Query: 540 INSVYGVDADEYVCRAVNK-GGVKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVKI 598
I + DA Y C+A + G + L I F F +GE+ V
Sbjct: 62 IYNANIEDAGIYRCQATDAKGQTQEATVVLEIYQKLTFREVVS---PQEFKQGEDAEVVC 118
Query: 599 PFTGYPKPKITWYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAPYRVVAENDLGMD 658
+ P P ++W NE + + + L I + + D YR + +
Sbjct: 119 RVSSSPAPAVSWLYHNEEVTTISDNRFAMLANNN-LQILNINKSDEGIYRCEGRVEARGE 177
Query: 659 SAIVKIQI 666
I +
Sbjct: 178 IDFRDIIV 185
Score = 136 bits (343), Expect = 2e-36
Identities = 35/185 (18%), Positives = 65/185 (35%), Gaps = 2/185 (1%)
Query: 91 PDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHF 150
+ L + + +G+ C A G P + G +I S R V+ G RL
Sbjct: 3 LQVTISLSKVELSVGESKFFTCTAIGEPESIDWYNPQGEKIISTQRVVVQKEGVRSRLTI 62
Query: 151 NEVTDVDNGDYTCEAYNSVGFAHTSS-RVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAG 209
D G Y C+A ++ G ++ ++I + + +G++ +V +
Sbjct: 63 YNANIEDAGIYRCQATDAKGQTQEATVVLEIYQKLTFREVVSPQEFKQGEDAEVVCRVSS 122
Query: 210 DQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTF 269
VS + V + +F +L + + I I K D G Y +
Sbjct: 123 SPAPAVSWLYHNEEVTTISDNRFAMLANNNLQ-ILNINKSDEGIYRCEGRVEARGEIDFR 181
Query: 270 TINIT 274
I +
Sbjct: 182 DIIVI 186
Score = 136 bits (343), Expect = 2e-36
Identities = 35/185 (18%), Positives = 65/185 (35%), Gaps = 2/185 (1%)
Query: 1698 PDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHF 1757
+ L + + +G+ C A G P + G +I S R V+ G RL
Sbjct: 3 LQVTISLSKVELSVGESKFFTCTAIGEPESIDWYNPQGEKIISTQRVVVQKEGVRSRLTI 62
Query: 1758 NEVTDVDNGDYTCEAYNSVGFAHTSS-RVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAG 1816
D G Y C+A ++ G ++ ++I + + +G++ +V +
Sbjct: 63 YNANIEDAGIYRCQATDAKGQTQEATVVLEIYQKLTFREVVSPQEFKQGEDAEVVCRVSS 122
Query: 1817 DQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTF 1876
VS + V + +F +L + + I I K D G Y +
Sbjct: 123 SPAPAVSWLYHNEEVTTISDNRFAMLANNNLQ-ILNINKSDEGIYRCEGRVEARGEIDFR 181
Query: 1877 TINIT 1881
I +
Sbjct: 182 DIIVI 186
Score = 97.2 bits (242), Expect = 7e-23
Identities = 24/119 (20%), Positives = 40/119 (33%), Gaps = 3/119 (2%)
Query: 2087 APEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLI 2146
++ + L + F CT G P+ + +I + R + EG L
Sbjct: 2 LLQVTISLSKVELSVGESKFFTCTAIGEPESIDWYNPQGEKIISTQRVVVQKEGVRSRLT 61
Query: 2147 INSVYGVDADEYVCRAVNK-GGVKSTKAELIIMTAPKFNVPPRFRDTAYFESDVVVVVC 2204
I + DA Y C+A + G + L I F + + + VVC
Sbjct: 62 IYNANIEDAGIYRCQATDAKGQTQEATVVLEIYQKLTFREVV--SPQEFKQGEDAEVVC 118
Score = 86.4 bits (214), Expect = 5e-19
Identities = 18/117 (15%), Positives = 42/117 (35%), Gaps = 8/117 (6%)
Query: 2061 AQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTIS 2120
A + G + ++ + + + Q +A+ C ++ P P +S
Sbjct: 77 ATDAKGQTQEATVVLEIY-------QKLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVS 129
Query: 2121 WLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELII 2177
WL + E+T + + + L I ++ D Y C + + ++I+
Sbjct: 130 WLYHNEEVTTISDNRFAMLAN-NNLQILNINKSDEGIYRCEGRVEARGEIDFRDIIV 185
Score = 81.0 bits (200), Expect = 4e-17
Identities = 20/120 (16%), Positives = 39/120 (32%), Gaps = 12/120 (10%)
Query: 63 IAVNAIGKSEPSICTTPVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKC 122
A +A G+++ + + +K F + G+ + C + +P P
Sbjct: 76 QATDAKGQTQEATVVLEIY-------QKLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAV 128
Query: 123 RWLRNGREI--SSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKI 180
WL + E+ S R+ + L + D G Y CE + +
Sbjct: 129 SWLYHNEEVTTISDNRFAMLANNN---LQILNINKSDEGIYRCEGRVEARGEIDFRDIIV 185
Score = 81.0 bits (200), Expect = 4e-17
Identities = 20/120 (16%), Positives = 39/120 (32%), Gaps = 12/120 (10%)
Query: 1670 IAVNAIGKSEPSICTTPVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKC 1729
A +A G+++ + + +K F + G+ + C + +P P
Sbjct: 76 QATDAKGQTQEATVVLEIY-------QKLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAV 128
Query: 1730 RWLRNGREI--SSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKI 1787
WL + E+ S R+ + L + D G Y CE + +
Sbjct: 129 SWLYHNEEVTTISDNRFAMLANNN---LQILNINKSDEGIYRCEGRVEARGEIDFRDIIV 185
Score = 58.3 bits (141), Expect = 2e-09
Identities = 17/108 (15%), Positives = 39/108 (36%), Gaps = 4/108 (3%)
Query: 1134 APKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQTI 1193
++T S+ + + GE T G P+ + G+++ R+ + ++
Sbjct: 2 LLQVTI--SLSKVELSVGESKFFTCTAIGEPESIDWYNPQGEKIISTQRVVVQKEGVRSR 59
Query: 1194 YRNKSAKRATDSGSYTIQLVNTVGSD-SASCKVYVVDKPSPPQGPLDV 1240
+A D+G Y Q + G A+ + + K + +
Sbjct: 60 LTIYNANI-EDAGIYRCQATDAKGQTQEATVVLEIYQKLTFREVVSPQ 106
Score = 53.2 bits (128), Expect = 1e-07
Identities = 16/95 (16%), Positives = 29/95 (30%), Gaps = 4/95 (4%)
Query: 1134 APKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQTI 1193
+S GE+ + S P P W + +EV+ +F N +
Sbjct: 96 KLTFREVVS--PQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLANNNL 153
Query: 1194 YRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYVV 1228
K +D G Y + + + V+
Sbjct: 154 QILNINK--SDEGIYRCEGRVEARGEIDFRDIIVI 186
Score = 48.6 bits (116), Expect = 4e-06
Identities = 13/99 (13%), Positives = 28/99 (28%), Gaps = 1/99 (1%)
Query: 183 PPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIF 242
++ + + + G++ G+ G + S R +
Sbjct: 2 LLQVTISLSKVELSVGESKFFTCTAIGEPESIDWYNPQGEKIISTQRVVVQKEGVRSRLT 61
Query: 243 IKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPI 281
I EDAG Y +++ G T+ +
Sbjct: 62 IYNANIEDAGIYRCQATDAKGQTQ-EATVVLEIYQKLTF 99
Score = 48.6 bits (116), Expect = 4e-06
Identities = 13/99 (13%), Positives = 28/99 (28%), Gaps = 1/99 (1%)
Query: 1790 PPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIF 1849
++ + + + G++ G+ G + S R +
Sbjct: 2 LLQVTISLSKVELSVGESKFFTCTAIGEPESIDWYNPQGEKIISTQRVVVQKEGVRSRLT 61
Query: 1850 IKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPI 1888
I EDAG Y +++ G T+ +
Sbjct: 62 IYNANIEDAGIYRCQATDAKGQTQ-EATVVLEIYQKLTF 99
Score = 48.6 bits (116), Expect = 4e-06
Identities = 15/74 (20%), Positives = 26/74 (35%), Gaps = 1/74 (1%)
Query: 1430 RDITVKAGEDFSIHVPFMAFPQPAAFWFANDSIIDDSDTRVHKQLTMNSASLVVKNSQRS 1489
+ + GE + P+ ++ I + RV Q + L + N+
Sbjct: 10 SKVELSVGESKFFTCTAIGEPESIDWYNPQGEKIISTQ-RVVVQKEGVRSRLTIYNANIE 68
Query: 1490 DGGQYRLQLKNPAG 1503
D G YR Q + G
Sbjct: 69 DAGIYRCQATDAKG 82
Score = 43.6 bits (103), Expect = 2e-04
Identities = 17/73 (23%), Positives = 28/73 (38%), Gaps = 2/73 (2%)
Query: 1431 DITVKAGEDFSIHVPFMAFPQPAAFWFANDSIIDDSDTRVHKQLTMNSASLVVKNSQRSD 1490
K GED + + P PA W ++ + L + +L + N +SD
Sbjct: 105 PQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAML--ANNNLQILNINKSD 162
Query: 1491 GGQYRLQLKNPAG 1503
G YR + + A
Sbjct: 163 EGIYRCEGRVEAR 175
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane,
transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo
sapiens}
Length = 291
Score = 142 bits (359), Expect = 3e-37
Identities = 47/225 (20%), Positives = 89/225 (39%), Gaps = 17/225 (7%)
Query: 454 AQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTIS 513
A + G + A+ ++I + Q +A+ C ++ P P +S
Sbjct: 79 ATDAKGQT--QEATVVLEIYQK-----LTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVS 131
Query: 514 WLKGSREI--TPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNK--GGVKSTKAELI 569
WL + E+ R + A L I ++ D Y C + G + +I
Sbjct: 132 WLYHNEEVTTISDNRFAMLANN---NLQILNINKSDEGIYRCEGRVEARGEIDFRDIIVI 188
Query: 570 IMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSE 629
+ P ++P + + ++GE + +G P+P I+W+R+ ++IE + ++ S
Sbjct: 189 VNVPPAISMPQKSFNA-TAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILKGSN 247
Query: 630 RHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQISDRPDPPQ 674
LT+R+ N D PY A N G D +Q+ +
Sbjct: 248 TE--LTVRNIINSDGGPYVCRATNKAGEDEKQAFLQVFVQHHHHH 290
Score = 127 bits (320), Expect = 4e-32
Identities = 37/205 (18%), Positives = 67/205 (32%), Gaps = 7/205 (3%)
Query: 480 APEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLI 539
++ + L + F CT G P+ + +I + R + EG L
Sbjct: 4 LLQVTISLSKVELSVGESKFFTCTAIGEPESIDWYNPQGEKIISTQRVVVQKEGVRSRLT 63
Query: 540 INSVYGVDADEYVCRAVNKGG-VKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVKI 598
I + DA Y C+A + G + L I F F +GE+ V
Sbjct: 64 IYNANIEDAGIYRCQATDAKGQTQEATVVLEIYQKLTFREVVS---PQEFKQGEDAEVVC 120
Query: 599 PFTGYPKPKITWYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAPYRVVAENDLG-- 656
+ P P ++W NE + + + L I + + D YR +
Sbjct: 121 RVSSSPAPAVSWLYHNEEVTTISDNRFAMLANNN-LQILNINKSDEGIYRCEGRVEARGE 179
Query: 657 MDSAIVKIQISDRPDPPQFPTVEDI 681
+D + + ++ P +
Sbjct: 180 IDFRDIIVIVNVPPAISMPQKSFNA 204
Score = 122 bits (308), Expect = 2e-30
Identities = 40/202 (19%), Positives = 71/202 (35%), Gaps = 3/202 (1%)
Query: 91 PDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHF 150
+ L + + +G+ C A G P + G +I S R V+ G RL
Sbjct: 5 LQVTISLSKVELSVGESKFFTCTAIGEPESIDWYNPQGEKIISTQRVVVQKEGVRSRLTI 64
Query: 151 NEVTDVDNGDYTCEAYNSVGFAHTSS-RVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAG 209
D G Y C+A ++ G ++ ++I + + +G++ +V +
Sbjct: 65 YNANIEDAGIYRCQATDAKGQTQEATVVLEIYQKLTFREVVSPQEFKQGEDAEVVCRVSS 124
Query: 210 DQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSS-GSVSGT 268
VS + V + +F +L + + I I K D G Y + G +
Sbjct: 125 SPAPAVSWLYHNEEVTTISDNRFAMLANNNLQ-ILNINKSDEGIYRCEGRVEARGEIDFR 183
Query: 269 FTINITGLPGPPIGPLDVSEIT 290
I I +P P T
Sbjct: 184 DIIVIVNVPPAISMPQKSFNAT 205
Score = 122 bits (308), Expect = 2e-30
Identities = 40/202 (19%), Positives = 71/202 (35%), Gaps = 3/202 (1%)
Query: 1698 PDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHF 1757
+ L + + +G+ C A G P + G +I S R V+ G RL
Sbjct: 5 LQVTISLSKVELSVGESKFFTCTAIGEPESIDWYNPQGEKIISTQRVVVQKEGVRSRLTI 64
Query: 1758 NEVTDVDNGDYTCEAYNSVGFAHTSS-RVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAG 1816
D G Y C+A ++ G ++ ++I + + +G++ +V +
Sbjct: 65 YNANIEDAGIYRCQATDAKGQTQEATVVLEIYQKLTFREVVSPQEFKQGEDAEVVCRVSS 124
Query: 1817 DQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSS-GSVSGT 1875
VS + V + +F +L + + I I K D G Y + G +
Sbjct: 125 SPAPAVSWLYHNEEVTTISDNRFAMLANNNLQ-ILNINKSDEGIYRCEGRVEARGEIDFR 183
Query: 1876 FTINITGLPGPPIGPLDVSEIT 1897
I I +P P T
Sbjct: 184 DIIVIVNVPPAISMPQKSFNAT 205
Score = 119 bits (301), Expect = 1e-29
Identities = 36/225 (16%), Positives = 76/225 (33%), Gaps = 18/225 (8%)
Query: 59 EFRIIAVNAIGKSEPSICTTPVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTP 118
+R A +A G+++ + + +K F + G+ + C + +P
Sbjct: 74 IYRCQATDAKGQTQEATVVLEIY-------QKLTFREVVSPQEFKQGEDAEVVCRVSSSP 126
Query: 119 VPKCRWLRNGREI--SSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVG--FAHT 174
P WL + E+ S R+ + L + D G Y CE
Sbjct: 127 APAVSWLYHNEEVTTISDNRFAMLANNN---LQILNINKSDEGIYRCEGRVEARGEIDFR 183
Query: 175 SSRVKIGTPPRI--DRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKF 232
V + PP I + G+ +G +S +NG++++ +++ +
Sbjct: 184 DIIVIVNVPPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEK--Y 241
Query: 233 TVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLP 277
+ + ++ I D G Y +N +G + +
Sbjct: 242 ILKGSNTELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQVFVQH 286
Score = 119 bits (301), Expect = 1e-29
Identities = 36/225 (16%), Positives = 76/225 (33%), Gaps = 18/225 (8%)
Query: 1666 EFRIIAVNAIGKSEPSICTTPVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTP 1725
+R A +A G+++ + + +K F + G+ + C + +P
Sbjct: 74 IYRCQATDAKGQTQEATVVLEIY-------QKLTFREVVSPQEFKQGEDAEVVCRVSSSP 126
Query: 1726 VPKCRWLRNGREI--SSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVG--FAHT 1781
P WL + E+ S R+ + L + D G Y CE
Sbjct: 127 APAVSWLYHNEEVTTISDNRFAMLANNN---LQILNINKSDEGIYRCEGRVEARGEIDFR 183
Query: 1782 SSRVKIGTPPRI--DRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKF 1839
V + PP I + G+ +G +S +NG++++ +++ +
Sbjct: 184 DIIVIVNVPPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEK--Y 241
Query: 1840 TVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLP 1884
+ + ++ I D G Y +N +G + +
Sbjct: 242 ILKGSNTELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQVFVQH 286
Score = 94.1 bits (234), Expect = 9e-21
Identities = 30/125 (24%), Positives = 49/125 (39%), Gaps = 10/125 (8%)
Query: 2061 AQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVP--LRNANAIQNHNAQFQCTITGCPKPT 2118
+ EA + + P I +P NA A + F C +G P+P
Sbjct: 172 GRVEARGEIDFRDIIVIV------NVPPAISMPQKSFNATAERGEEMTFSCRASGSPEPA 225
Query: 2119 ISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIM 2178
ISW + + I + ++ + +G L + ++ D YVCRA NK G +A L +
Sbjct: 226 ISWFRNGKLIEENEKYIL--KGSNTELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQVF 283
Query: 2179 TAPKF 2183
Sbjct: 284 VQHHH 288
Score = 89.9 bits (223), Expect = 2e-19
Identities = 24/120 (20%), Positives = 40/120 (33%), Gaps = 3/120 (2%)
Query: 2087 APEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLI 2146
++ + L + F CT G P+ + +I + R + EG L
Sbjct: 4 LLQVTISLSKVELSVGESKFFTCTAIGEPESIDWYNPQGEKIISTQRVVVQKEGVRSRLT 63
Query: 2147 INSVYGVDADEYVCRAVNKGG-VKSTKAELIIMTAPKFNVPPRFRDTAYFESDVVVVVCV 2205
I + DA Y C+A + G + L I F + + + VVC
Sbjct: 64 IYNANIEDAGIYRCQATDAKGQTQEATVVLEIYQKLTFREVV--SPQEFKQGEDAEVVCR 121
Score = 88.7 bits (220), Expect = 6e-19
Identities = 23/100 (23%), Positives = 40/100 (40%), Gaps = 4/100 (4%)
Query: 89 EKPDFIVP--LKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVF 146
P +P + G+ +T C A+G+P P W RNG+ I +Y ++ +
Sbjct: 191 VPPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILKGSNT-- 248
Query: 147 RLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRI 186
L + + D G Y C A N G + +++
Sbjct: 249 ELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQVFVQHHH 288
Score = 88.7 bits (220), Expect = 6e-19
Identities = 23/100 (23%), Positives = 40/100 (40%), Gaps = 4/100 (4%)
Query: 1696 EKPDFIVP--LKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVF 1753
P +P + G+ +T C A+G+P P W RNG+ I +Y ++ +
Sbjct: 191 VPPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILKGSNT-- 248
Query: 1754 RLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRI 1793
L + + D G Y C A N G + +++
Sbjct: 249 ELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQVFVQHHH 288
Score = 86.8 bits (215), Expect = 3e-18
Identities = 25/148 (16%), Positives = 51/148 (34%), Gaps = 14/148 (9%)
Query: 2061 AQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTIS 2120
A + G + A+ ++I + Q +A+ C ++ P P +S
Sbjct: 79 ATDAKGQT--QEATVVLEIYQK-----LTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVS 131
Query: 2121 WLKGSREI--TPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNK--GGVKSTKAELI 2176
WL + E+ R + A L I ++ D Y C + G + +I
Sbjct: 132 WLYHNEEVTTISDNRFAMLANN---NLQILNINKSDEGIYRCEGRVEARGEIDFRDIIVI 188
Query: 2177 IMTAPKFNVPPRFRDTAYFESDVVVVVC 2204
+ P ++P + + + + C
Sbjct: 189 VNVPPAISMPQKSFNATAERGEEMTFSC 216
Score = 67.5 bits (165), Expect = 7e-12
Identities = 23/103 (22%), Positives = 37/103 (35%), Gaps = 5/103 (4%)
Query: 1134 APKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQ-T 1192
P I+ + T GEE T + SG P+P W NG + + + + S + T
Sbjct: 192 PPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILKGSNTELT 251
Query: 1193 IYRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYVVDKPSPPQ 1235
+ +D G Y + N G D + V +
Sbjct: 252 VRN----IINSDGGPYVCRATNKAGEDEKQAFLQVFVQHHHHH 290
Score = 57.5 bits (139), Expect = 1e-08
Identities = 18/108 (16%), Positives = 39/108 (36%), Gaps = 4/108 (3%)
Query: 1134 APKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQTI 1193
++T LS + + GE T G P+ + G+++ R+ + ++
Sbjct: 4 LLQVTISLS--KVELSVGESKFFTCTAIGEPESIDWYNPQGEKIISTQRVVVQKEGVRSR 61
Query: 1194 YRNKSAKRATDSGSYTIQLVNTVGSD-SASCKVYVVDKPSPPQGPLDV 1240
+A D+G Y Q + G A+ + + K + +
Sbjct: 62 LTIYNA-NIEDAGIYRCQATDAKGQTQEATVVLEIYQKLTFREVVSPQ 108
Score = 53.7 bits (129), Expect = 2e-07
Identities = 27/96 (28%), Positives = 42/96 (43%), Gaps = 5/96 (5%)
Query: 1413 VIVEEQPNKPVMDLSGVRDITVKAGEDFSIHVPFMAFPQPAAFWFANDSIIDDSDTRVHK 1472
VIV P + + T + GE+ + P+PA WF N +I++++
Sbjct: 187 VIVNVPP--AISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENE---KY 241
Query: 1473 QLTMNSASLVVKNSQRSDGGQYRLQLKNPAGFDTAT 1508
L ++ L V+N SDGG Y + N AG D
Sbjct: 242 ILKGSNTELTVRNIINSDGGPYVCRATNKAGEDEKQ 277
Score = 51.7 bits (124), Expect = 1e-06
Identities = 20/112 (17%), Positives = 33/112 (29%), Gaps = 5/112 (4%)
Query: 1134 APKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQTI 1193
+ GE+ + S P P W + +EV+ +F N +
Sbjct: 98 KLTFRE--VVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLANNNL 155
Query: 1194 YRNKSAKRATDSGSYT-IQLVNTVGSDSASCKVYVVDKPSPPQGPLDVSDIT 1244
K +D G Y V G + +V+ P P + T
Sbjct: 156 QILNINK--SDEGIYRCEGRVEARGEIDFRDIIVIVNVPPAISMPQKSFNAT 205
Score = 49.4 bits (118), Expect = 6e-06
Identities = 14/116 (12%), Positives = 29/116 (25%), Gaps = 1/116 (0%)
Query: 183 PPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIF 242
++ + + + G++ G+ G + S R +
Sbjct: 4 LLQVTISLSKVELSVGESKFFTCTAIGEPESIDWYNPQGEKIISTQRVVVQKEGVRSRLT 63
Query: 243 IKEIRKEDAGDYTVNLSNSSGSV-SGTFTINITGLPGPPIGPLDVSEITKHTCTLH 297
I EDAG Y +++ G T + I +
Sbjct: 64 IYNANIEDAGIYRCQATDAKGQTQEATVVLEIYQKLTFREVVSPQEFKQGEDAEVV 119
Score = 49.4 bits (118), Expect = 6e-06
Identities = 14/116 (12%), Positives = 29/116 (25%), Gaps = 1/116 (0%)
Query: 1790 PPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIF 1849
++ + + + G++ G+ G + S R +
Sbjct: 4 LLQVTISLSKVELSVGESKFFTCTAIGEPESIDWYNPQGEKIISTQRVVVQKEGVRSRLT 63
Query: 1850 IKEIRKEDAGDYTVNLSNSSGSV-SGTFTINITGLPGPPIGPLDVSEITKHTCTLH 1904
I EDAG Y +++ G T + I +
Sbjct: 64 IYNANIEDAGIYRCQATDAKGQTQEATVVLEIYQKLTFREVVSPQEFKQGEDAEVV 119
Score = 47.5 bits (113), Expect = 2e-05
Identities = 16/74 (21%), Positives = 25/74 (33%), Gaps = 1/74 (1%)
Query: 1430 RDITVKAGEDFSIHVPFMAFPQPAAFWFANDSIIDDSDTRVHKQLTMNSASLVVKNSQRS 1489
+ + GE + P+ W+ S RV Q + L + N+
Sbjct: 12 SKVELSVGESKFFTCTAIGEPESID-WYNPQGEKIISTQRVVVQKEGVRSRLTIYNANIE 70
Query: 1490 DGGQYRLQLKNPAG 1503
D G YR Q + G
Sbjct: 71 DAGIYRCQATDAKG 84
Score = 42.9 bits (101), Expect = 7e-04
Identities = 19/75 (25%), Positives = 31/75 (41%), Gaps = 4/75 (5%)
Query: 1430 RDITVKAGEDFSIHVPFMAFPQPAAFWFAND-SIIDDSDTRVHKQLTMNSASLVVKNSQR 1488
K GED + + P PA W ++ + SD R + + +L + N +
Sbjct: 106 SPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAM---LANNNLQILNINK 162
Query: 1489 SDGGQYRLQLKNPAG 1503
SD G YR + + A
Sbjct: 163 SDEGIYRCEGRVEAR 177
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling
protein,transferase; 2.21A {Rattus norvegicus}
Length = 192
Score = 137 bits (347), Expect = 7e-37
Identities = 54/185 (29%), Positives = 72/185 (38%), Gaps = 10/185 (5%)
Query: 478 AKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPS-ARHHIFAEGDTY 536
KAP I PL +A+ A F C + P+P ISW + I R+ I G
Sbjct: 5 PKAPVITTPLETVDALVEEVATFMCAVESYPQPEISWTRNKILIKLFDTRYSIRENGQ-- 62
Query: 537 TLIINSVYGVDADEYVCRAVNK-GGVKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENVV 595
L I SV D Y C A N GG + L + PK PP +G V
Sbjct: 63 LLTILSVEDSDDGIYCCTANNGVGGAVESCGALQVKMKPKITRPPINVKII---EGLKAV 119
Query: 596 VKIPFTGYPKPKITWYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAPYRVVAENDL 655
+ G PKP ++W + + + V S L I + D YR VA+N L
Sbjct: 120 LPCTTMGNPKPSVSWIKGDSALRENSRIAVLES---GSLRIHNVQKEDAGQYRCVAKNSL 176
Query: 656 GMDSA 660
G +
Sbjct: 177 GTAYS 181
Score = 124 bits (313), Expect = 3e-32
Identities = 51/180 (28%), Positives = 76/180 (42%), Gaps = 7/180 (3%)
Query: 89 EKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREIS-SGARYRVETAGGVFR 147
+ P PL+ + + ++ T C P P+ W RN I RY + G +
Sbjct: 6 KAPVITTPLETVDALVEEVATFMCAVESYPQPEISWTRNKILIKLFDTRYSIRENGQL-- 63
Query: 148 LHFNEVTDVDNGDYTCEAYNSVGFAHTSS-RVKIGTPPRIDRMPNALYIPEGDNTKVKIF 206
L V D D+G Y C A N VG A S +++ P+I R P + I EG +
Sbjct: 64 LTILSVEDSDDGIYCCTANNGVGGAVESCGALQVKMKPKITRPPINVKIIEGLKAVLPCT 123
Query: 207 YAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVS 266
G+ VS K ++ + R VL+ + I ++KEDAG Y NS G+
Sbjct: 124 TMGNPKPSVSWIKGDSALRENSR--IAVLESGSLR-IHNVQKEDAGQYRCVAKNSLGTAY 180
Score = 124 bits (313), Expect = 3e-32
Identities = 51/180 (28%), Positives = 76/180 (42%), Gaps = 7/180 (3%)
Query: 1696 EKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREIS-SGARYRVETAGGVFR 1754
+ P PL+ + + ++ T C P P+ W RN I RY + G +
Sbjct: 6 KAPVITTPLETVDALVEEVATFMCAVESYPQPEISWTRNKILIKLFDTRYSIRENGQL-- 63
Query: 1755 LHFNEVTDVDNGDYTCEAYNSVGFAHTSS-RVKIGTPPRIDRMPNALYIPEGDNTKVKIF 1813
L V D D+G Y C A N VG A S +++ P+I R P + I EG +
Sbjct: 64 LTILSVEDSDDGIYCCTANNGVGGAVESCGALQVKMKPKITRPPINVKIIEGLKAVLPCT 123
Query: 1814 YAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVS 1873
G+ VS K ++ + R VL+ + I ++KEDAG Y NS G+
Sbjct: 124 TMGNPKPSVSWIKGDSALRENSR--IAVLESGSLR-IHNVQKEDAGQYRCVAKNSLGTAY 180
Score = 96.7 bits (241), Expect = 1e-22
Identities = 36/119 (30%), Positives = 56/119 (47%), Gaps = 11/119 (9%)
Query: 454 AQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTIS 513
A N G ++ S + V++K P+I P N I+ A CT G PKP++S
Sbjct: 81 ANNGVGGAVESCGALQVKMK-------PKITRPPINVKIIEGLKAVLPCTTMGNPKPSVS 133
Query: 514 WLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGG-VKSTKAELIIM 571
W+KG + ++R + G +L I++V DA +Y C A N G S +L +
Sbjct: 134 WIKGDSALRENSRIAVLESG---SLRIHNVQKEDAGQYRCVAKNSLGTAYSKLVKLEVE 189
Score = 96.7 bits (241), Expect = 1e-22
Identities = 36/119 (30%), Positives = 56/119 (47%), Gaps = 11/119 (9%)
Query: 2061 AQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTIS 2120
A N G ++ S + V++K P+I P N I+ A CT G PKP++S
Sbjct: 81 ANNGVGGAVESCGALQVKMK-------PKITRPPINVKIIEGLKAVLPCTTMGNPKPSVS 133
Query: 2121 WLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGG-VKSTKAELIIM 2178
W+KG + ++R + G +L I++V DA +Y C A N G S +L +
Sbjct: 134 WIKGDSALRENSRIAVLESG---SLRIHNVQKEDAGQYRCVAKNSLGTAYSKLVKLEVE 189
Score = 90.2 bits (224), Expect = 2e-20
Identities = 38/122 (31%), Positives = 48/122 (39%), Gaps = 6/122 (4%)
Query: 2085 AKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPS-ARHHIFAEGDTY 2143
KAP I PL +A+ A F C + P+P ISW + I R+ I G
Sbjct: 5 PKAPVITTPLETVDALVEEVATFMCAVESYPQPEISWTRNKILIKLFDTRYSIRENGQ-- 62
Query: 2144 TLIINSVYGVDADEYVCRAVNK-GGVKSTKAELIIMTAPKFNVPPRFRDTAYFESDVVVV 2202
L I SV D Y C A N GG + L + PK PP + E V+
Sbjct: 63 LLTILSVEDSDDGIYCCTANNGVGGAVESCGALQVKMKPKITRPP--INVKIIEGLKAVL 120
Query: 2203 VC 2204
C
Sbjct: 121 PC 122
Score = 87.1 bits (216), Expect = 2e-19
Identities = 24/88 (27%), Positives = 36/88 (40%), Gaps = 3/88 (3%)
Query: 89 EKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRL 148
KP P ++ + G L C G P P W++ + +R V +G L
Sbjct: 99 MKPKITRPPINVKIIEGLKAVLPCTTMGNPKPSVSWIKGDSALRENSRIAVLESGS---L 155
Query: 149 HFNEVTDVDNGDYTCEAYNSVGFAHTSS 176
+ V D G Y C A NS+G A++
Sbjct: 156 RIHNVQKEDAGQYRCVAKNSLGTAYSKL 183
Score = 87.1 bits (216), Expect = 2e-19
Identities = 24/88 (27%), Positives = 36/88 (40%), Gaps = 3/88 (3%)
Query: 1696 EKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRL 1755
KP P ++ + G L C G P P W++ + +R V +G L
Sbjct: 99 MKPKITRPPINVKIIEGLKAVLPCTTMGNPKPSVSWIKGDSALRENSRIAVLESGS---L 155
Query: 1756 HFNEVTDVDNGDYTCEAYNSVGFAHTSS 1783
+ V D G Y C A NS+G A++
Sbjct: 156 RIHNVQKEDAGQYRCVAKNSLGTAYSKL 183
Score = 57.8 bits (140), Expect = 3e-09
Identities = 19/89 (21%), Positives = 36/89 (40%), Gaps = 6/89 (6%)
Query: 1134 APKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQTI 1193
PKIT ++ ++ G + + G PKP+ W + + RI S + I
Sbjct: 100 KPKITRPPI--NVKIIEGLKAVLPCTTMGNPKPSVSWIKGDSALRENSRIAVLESGSLRI 157
Query: 1194 YRNKSAKRATDSGSYTIQLVNTVGSDSAS 1222
+ + D+G Y N++G+ +
Sbjct: 158 HN----VQKEDAGQYRCVAKNSLGTAYSK 182
Score = 49.7 bits (119), Expect = 2e-06
Identities = 21/79 (26%), Positives = 35/79 (44%), Gaps = 4/79 (5%)
Query: 1430 RDITVKAGEDFSIHVPFMAFPQPAAFWFANDSIIDDSDTRVHKQLTMNSASLVVKNSQRS 1489
++ + G + M P+P+ W DS + ++ R+ + S SL + N Q+
Sbjct: 108 INVKIIEGLKAVLPCTTMGNPKPSVSWIKGDSALRENS-RIA---VLESGSLRIHNVQKE 163
Query: 1490 DGGQYRLQLKNPAGFDTAT 1508
D GQYR KN G +
Sbjct: 164 DAGQYRCVAKNSLGTAYSK 182
Score = 48.2 bits (115), Expect = 7e-06
Identities = 27/111 (24%), Positives = 41/111 (36%), Gaps = 5/111 (4%)
Query: 1132 PCAPKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQ 1191
P AP IT+ + + L E T P+P WT N + ++ EN
Sbjct: 5 PKAPVITT--PLETVDALVEEVATFMCAVESYPQPEISWTRNKILIKLFDT-RYSIRENG 61
Query: 1192 TIYRNKSAKRATDSGSYTIQLVNTVGSD-SASCKVYVVDKPSPPQGPLDVS 1241
+ S +D G Y N VG + + V KP + P++V
Sbjct: 62 QLLTILSV-EDSDDGIYCCTANNGVGGAVESCGALQVKMKPKITRPPINVK 111
Score = 46.3 bits (110), Expect = 3e-05
Identities = 22/88 (25%), Positives = 35/88 (39%), Gaps = 3/88 (3%)
Query: 1416 EEQPNKPVMDLSGVRDITVKAGEDFSIHVPFMAFPQPAAFWFANDSIIDDSDTRVHKQLT 1475
E+ P PV+ + + + E + ++PQP W N +I DTR +
Sbjct: 2 EKLPKAPVI-TTPLETVDALVEEVATFMCAVESYPQPEISWTRNKILIKLFDTRYS--IR 58
Query: 1476 MNSASLVVKNSQRSDGGQYRLQLKNPAG 1503
N L + + + SD G Y N G
Sbjct: 59 ENGQLLTILSVEDSDDGIYCCTANNGVG 86
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation,
immunoglobulin domain, membrane, glycoprote adhesion,
transmembrane; HET: NAG; 2.00A {Homo sapiens}
Length = 189
Score = 137 bits (346), Expect = 8e-37
Identities = 41/189 (21%), Positives = 79/189 (41%), Gaps = 6/189 (3%)
Query: 480 APEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLI 539
+ Q +A+ C ++ P P +SWL + E+T + + + L
Sbjct: 2 MLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLAN-NNLQ 60
Query: 540 INSVYGVDADEYVCRAVNKGG--VKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVK 597
I ++ D Y C + + +I+ P ++P + + ++GE +
Sbjct: 61 ILNINKSDEGIYRCEGRVEARGEIDFRDIIVIVNVPPAISMPQKSFNA-TAERGEEMTFS 119
Query: 598 IPFTGYPKPKITWYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAPYRVVAENDLGM 657
+G P+P I+W+R+ ++IE + ++ S LT+R+ N D PY A N G
Sbjct: 120 CRASGSPEPAISWFRNGKLIEENEKYILKGSNTE--LTVRNIINSDGGPYVCRATNKAGE 177
Query: 658 DSAIVKIQI 666
D +Q+
Sbjct: 178 DEKQAFLQV 186
Score = 114 bits (288), Expect = 6e-29
Identities = 31/189 (16%), Positives = 63/189 (33%), Gaps = 11/189 (5%)
Query: 91 PDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREI--SSGARYRVETAGGVFRL 148
F + G+ + C + +P P WL + E+ S R+ + L
Sbjct: 3 LTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLANNN---L 59
Query: 149 HFNEVTDVDNGDYTCEAYNSVG--FAHTSSRVKIGTPPRI--DRMPNALYIPEGDNTKVK 204
+ D G Y CE V + PP I + G+
Sbjct: 60 QILNINKSDEGIYRCEGRVEARGEIDFRDIIVIVNVPPAISMPQKSFNATAERGEEMTFS 119
Query: 205 IFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGS 264
+G +S +NG++++ +++ + + + ++ I D G Y +N +G
Sbjct: 120 CRASGSPEPAISWFRNGKLIEENEK--YILKGSNTELTVRNIINSDGGPYVCRATNKAGE 177
Query: 265 VSGTFTINI 273
+ +
Sbjct: 178 DEKQAFLQV 186
Score = 114 bits (288), Expect = 6e-29
Identities = 31/189 (16%), Positives = 63/189 (33%), Gaps = 11/189 (5%)
Query: 1698 PDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREI--SSGARYRVETAGGVFRL 1755
F + G+ + C + +P P WL + E+ S R+ + L
Sbjct: 3 LTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLANNN---L 59
Query: 1756 HFNEVTDVDNGDYTCEAYNSVG--FAHTSSRVKIGTPPRI--DRMPNALYIPEGDNTKVK 1811
+ D G Y CE V + PP I + G+
Sbjct: 60 QILNINKSDEGIYRCEGRVEARGEIDFRDIIVIVNVPPAISMPQKSFNATAERGEEMTFS 119
Query: 1812 IFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGS 1871
+G +S +NG++++ +++ + + + ++ I D G Y +N +G
Sbjct: 120 CRASGSPEPAISWFRNGKLIEENEK--YILKGSNTELTVRNIINSDGGPYVCRATNKAGE 177
Query: 1872 VSGTFTINI 1880
+ +
Sbjct: 178 DEKQAFLQV 186
Score = 89.1 bits (221), Expect = 6e-20
Identities = 30/119 (25%), Positives = 49/119 (41%), Gaps = 10/119 (8%)
Query: 454 AQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVP--LRNANAIQNHNAQFQCTITGCPKPT 511
+ EA + + P I +P NA A + F C +G P+P
Sbjct: 76 GRVEARGEIDFRDIIVI------VNVPPAISMPQKSFNATAERGEEMTFSCRASGSPEPA 129
Query: 512 ISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELII 570
ISW + + I + ++ + +G L + ++ D YVCRA NK G +A L +
Sbjct: 130 ISWFRNGKLIEENEKYIL--KGSNTELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQV 186
Score = 89.1 bits (221), Expect = 6e-20
Identities = 30/119 (25%), Positives = 49/119 (41%), Gaps = 10/119 (8%)
Query: 2061 AQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVP--LRNANAIQNHNAQFQCTITGCPKPT 2118
+ EA + + P I +P NA A + F C +G P+P
Sbjct: 76 GRVEARGEIDFRDIIVI------VNVPPAISMPQKSFNATAERGEEMTFSCRASGSPEPA 129
Query: 2119 ISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELII 2177
ISW + + I + ++ + +G L + ++ D YVCRA NK G +A L +
Sbjct: 130 ISWFRNGKLIEENEKYIL--KGSNTELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQV 186
Score = 86.4 bits (214), Expect = 4e-19
Identities = 19/120 (15%), Positives = 42/120 (35%), Gaps = 3/120 (2%)
Query: 2087 APEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLI 2146
+ Q +A+ C ++ P P +SWL + E+T + + + L
Sbjct: 2 MLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLAN-NNLQ 60
Query: 2147 INSVYGVDADEYVCRAVNKGG--VKSTKAELIIMTAPKFNVPPRFRDTAYFESDVVVVVC 2204
I ++ D Y C + + +I+ P ++P + + + + C
Sbjct: 61 ILNINKSDEGIYRCEGRVEARGEIDFRDIIVIVNVPPAISMPQKSFNATAERGEEMTFSC 120
Score = 83.7 bits (207), Expect = 3e-18
Identities = 23/93 (24%), Positives = 40/93 (43%), Gaps = 4/93 (4%)
Query: 90 KPDFIVP--LKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFR 147
P +P + G+ +T C A+G+P P W RNG+ I +Y ++ +
Sbjct: 96 PPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILKGSNT--E 153
Query: 148 LHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKI 180
L + + D G Y C A N G + +++
Sbjct: 154 LTVRNIINSDGGPYVCRATNKAGEDEKQAFLQV 186
Score = 83.7 bits (207), Expect = 3e-18
Identities = 23/93 (24%), Positives = 40/93 (43%), Gaps = 4/93 (4%)
Query: 1697 KPDFIVP--LKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFR 1754
P +P + G+ +T C A+G+P P W RNG+ I +Y ++ +
Sbjct: 96 PPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILKGSNT--E 153
Query: 1755 LHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKI 1787
L + + D G Y C A N G + +++
Sbjct: 154 LTVRNIINSDGGPYVCRATNKAGEDEKQAFLQV 186
Score = 57.9 bits (140), Expect = 3e-09
Identities = 22/94 (23%), Positives = 33/94 (35%), Gaps = 3/94 (3%)
Query: 1134 APKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQTI 1193
P I+ + T GEE T + SG P+P W NG + + + N +
Sbjct: 96 PPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYIL-KGSNTEL 154
Query: 1194 YRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYV 1227
+D G Y + N G D + V
Sbjct: 155 TVRNIIN--SDGGPYVCRATNKAGEDEKQAFLQV 186
Score = 57.1 bits (138), Expect = 5e-09
Identities = 31/127 (24%), Positives = 50/127 (39%), Gaps = 8/127 (6%)
Query: 1383 SKIRPTSSTVY-CKDTTMNSSNSEPGKQSGPVIVEEQPNKPVMDLSGVRDITVKAGEDFS 1441
I + +Y C + E + VIV P + + T + GE+ +
Sbjct: 62 LNINKSDEGIYRC--EGRVEARGEIDFRDIIVIVNVPP--AISMPQKSFNATAERGEEMT 117
Query: 1442 IHVPFMAFPQPAAFWFANDSIIDDSDTRVHKQLTMNSASLVVKNSQRSDGGQYRLQLKNP 1501
P+PA WF N +I++++ L ++ L V+N SDGG Y + N
Sbjct: 118 FSCRASGSPEPAISWFRNGKLIEENE---KYILKGSNTELTVRNIINSDGGPYVCRATNK 174
Query: 1502 AGFDTAT 1508
AG D
Sbjct: 175 AGEDEKQ 181
Score = 51.3 bits (123), Expect = 4e-07
Identities = 18/112 (16%), Positives = 33/112 (29%), Gaps = 8/112 (7%)
Query: 1134 APKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQTI 1193
+S GE+ + S P P W + +EV+ +F N +
Sbjct: 2 MLTFREVVS--PQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLANNNL 59
Query: 1194 YRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYVV----DKPSPPQGPLDVS 1241
+D G Y + + + V+ S PQ + +
Sbjct: 60 QILNI--NKSDEGIYRCEGRVEARGEIDFRDIIVIVNVPPAISMPQKSFNAT 109
Score = 44.4 bits (105), Expect = 9e-05
Identities = 17/120 (14%), Positives = 35/120 (29%), Gaps = 5/120 (4%)
Query: 182 TPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIII 241
+ + + +G++ +V + VS + V + +F +L + +
Sbjct: 1 SMLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLANNNLQ 60
Query: 242 FIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPI----GPLDVSEITKHTCTLH 297
I I K D G Y + I + P I + + T
Sbjct: 61 -ILNINKSDEGIYRCEGRVEARGEIDFRDIIVIVNVPPAISMPQKSFNATAERGEEMTFS 119
Score = 44.4 bits (105), Expect = 9e-05
Identities = 17/120 (14%), Positives = 35/120 (29%), Gaps = 5/120 (4%)
Query: 1789 TPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIII 1848
+ + + +G++ +V + VS + V + +F +L + +
Sbjct: 1 SMLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLANNNLQ 60
Query: 1849 FIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPI----GPLDVSEITKHTCTLH 1904
I I K D G Y + I + P I + + T
Sbjct: 61 -ILNINKSDEGIYRCEGRVEARGEIDFRDIIVIVNVPPAISMPQKSFNATAERGEEMTFS 119
Score = 44.0 bits (104), Expect = 1e-04
Identities = 19/96 (19%), Positives = 36/96 (37%), Gaps = 4/96 (4%)
Query: 1430 RDITVKAGEDFSIHVPFMAFPQPAAFWFANDSIIDDSDTRVHKQLTMNSASLVVKNSQRS 1489
K GED + + P PA W ++ + ++ + + +L + N +S
Sbjct: 10 SPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISD--NRFAMLANNNLQILNINKS 67
Query: 1490 DGGQYRLQLKNPAG--FDTATLHSRLRTLPDSVNPR 1523
D G YR + + A D + + P P+
Sbjct: 68 DEGIYRCEGRVEARGEIDFRDIIVIVNVPPAISMPQ 103
>2y25_A Myomesin; structural protein, sarcomere, M-BAND,
immunoglobulin-like D; 3.50A {Homo sapiens}
Length = 317
Score = 141 bits (356), Expect = 1e-36
Identities = 40/245 (16%), Positives = 79/245 (32%), Gaps = 18/245 (7%)
Query: 89 EKPDFIVPLKDLVVPLGKLLTLQCEATGT-PVPKCRWLRNGREISSGARYRVETAGGVFR 147
P F+ L V + L+C+ W ++ REIS ++ + G+
Sbjct: 6 TGPHFVEYLSWEVTG-ECNVLLKCKVANIKKETHIVWYKDEREISVDEKHDFK--DGICT 62
Query: 148 LHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVK--- 204
L E + D G Y + G + ++ + + K++
Sbjct: 63 LLITEFSKKDAGIYEVILKDDRGKDKSRLKLVDEAFKELMMEVCKKIALSATDLKIQSTA 122
Query: 205 -------IFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVN 257
+ ++V+ + NG ++ DR K V + I + I E D G Y +
Sbjct: 123 EGIQLYSFVTYYVEDLKVNWSHNGSAIRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVME 182
Query: 258 LSNSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERR 317
L + T ++ + K N + GGL + E +
Sbjct: 183 LFDGKTGHQKTVDLSGQAYDEAYAEFQRL----KQAAIAEKNRARVLGGLPDVVTIQEGK 238
Query: 318 DISMP 322
+++
Sbjct: 239 ALNLT 243
Score = 141 bits (356), Expect = 1e-36
Identities = 40/245 (16%), Positives = 79/245 (32%), Gaps = 18/245 (7%)
Query: 1696 EKPDFIVPLKDLVVPLGKLLTLQCEATGT-PVPKCRWLRNGREISSGARYRVETAGGVFR 1754
P F+ L V + L+C+ W ++ REIS ++ + G+
Sbjct: 6 TGPHFVEYLSWEVTG-ECNVLLKCKVANIKKETHIVWYKDEREISVDEKHDFK--DGICT 62
Query: 1755 LHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVK--- 1811
L E + D G Y + G + ++ + + K++
Sbjct: 63 LLITEFSKKDAGIYEVILKDDRGKDKSRLKLVDEAFKELMMEVCKKIALSATDLKIQSTA 122
Query: 1812 -------IFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVN 1864
+ ++V+ + NG ++ DR K V + I + I E D G Y +
Sbjct: 123 EGIQLYSFVTYYVEDLKVNWSHNGSAIRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVME 182
Query: 1865 LSNSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERR 1924
L + T ++ + K N + GGL + E +
Sbjct: 183 LFDGKTGHQKTVDLSGQAYDEAYAEFQRL----KQAAIAEKNRARVLGGLPDVVTIQEGK 238
Query: 1925 DISMP 1929
+++
Sbjct: 239 ALNLT 243
Score = 140 bits (353), Expect = 3e-36
Identities = 38/247 (15%), Positives = 81/247 (32%), Gaps = 37/247 (14%)
Query: 449 EFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGC- 507
+ V +++ G + + + E+++ + A+ + + Q T G
Sbjct: 75 IYEVILKDDRGKD---KSRLKLVDEAF-----KELMMEVCKKIALSATDLKIQSTAEGIQ 126
Query: 508 ---------PKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNK 558
++W I S R G+ L IN D +YV +
Sbjct: 127 LYSFVTYYVEDLKVNWSHNGSAIRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDG 186
Query: 559 GGVKSTKAELII---------------MTAPKFNVPPRFR---DTAYFDKGENVVVKIPF 600
+L + N D +G+ + +
Sbjct: 187 KTGHQKTVDLSGQAYDEAYAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGKALNLTCNV 246
Query: 601 TGYPKPKITWYRDNEVIESGGHFHV-ETSERHAILTIRDASNVDTAPYRVVAENDLGMDS 659
G P P+++W ++ + + S H ++ + R A TI S D+ Y +V +N G ++
Sbjct: 247 WGDPPPEVSWLKNEKALASDDHCNLKFEAGRTAYFTINGVSTADSGKYGLVVKNKYGSET 306
Query: 660 AIVKIQI 666
+ + +
Sbjct: 307 SDFTVSV 313
Score = 132 bits (334), Expect = 1e-33
Identities = 32/224 (14%), Positives = 62/224 (27%), Gaps = 13/224 (5%)
Query: 479 KAPEIIVPLRNANAIQNHNAQFQCTITGCPK-PTISWLKGSREITPSARHHIFAEGDTYT 537
P + L N +C + K I W K REI+ +H + T
Sbjct: 6 TGPHFVEYLSW-EVTGECNVLLKCKVANIKKETHIVWYKDEREISVDEKHDF--KDGICT 62
Query: 538 LIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPR-----FRDTAYFDKGE 592
L+I DA Y + G ++ +L+ + +
Sbjct: 63 LLITEFSKKDAGIYEVILKDDRGKDKSRLKLVDEAFKELMMEVCKKIALSATDLKIQSTA 122
Query: 593 NVVVKIPF--TGYPKPKITWYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAPYRVV 650
+ F K+ W + I + L I + + D Y +
Sbjct: 123 EGIQLYSFVTYYVEDLKVNWSHNGSAIRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVME 182
Query: 651 AENDLGMDSAIVKIQISDRPDPPQFPTVEDIGHDSLALVWRAPI 694
+ V + + + + + ++A RA +
Sbjct: 183 LFDGKTGHQKTVDLSGQAYDEA--YAEFQRLKQAAIAEKNRARV 224
Score = 130 bits (327), Expect = 9e-33
Identities = 46/247 (18%), Positives = 78/247 (31%), Gaps = 40/247 (16%)
Query: 59 EFRIIAVNAIGKSEPSICTTPVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTP 118
+ +I + GK + S + + ++ + + L +Q A G
Sbjct: 75 IYEVILKDDRGKDK-SRLKLVDE-------AFKELMMEVCKKIALSATDLKIQSTAEGIQ 126
Query: 119 VPKC----------RWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNS 168
+ W NG I R + G L NE T D G Y E ++
Sbjct: 127 LYSFVTYYVEDLKVNWSHNGSAIRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDG 186
Query: 169 VGFAHTSSRVKI---------------------GTPPRIDRMPNALYIPEGDNTKVKIFY 207
+ + + +P+ + I EG +
Sbjct: 187 KTGHQKTVDLSGQAYDEAYAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGKALNLTCNV 246
Query: 208 AGDQPMEVSLTKNGRVVQSDDRFKFTV-LDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVS 266
GD P EVS KN + + SDD I + D+G Y + + N GS +
Sbjct: 247 WGDPPPEVSWLKNEKALASDDHCNLKFEAGRTAYFTINGVSTADSGKYGLVVKNKYGSET 306
Query: 267 GTFTINI 273
FT+++
Sbjct: 307 SDFTVSV 313
Score = 130 bits (327), Expect = 9e-33
Identities = 46/247 (18%), Positives = 78/247 (31%), Gaps = 40/247 (16%)
Query: 1666 EFRIIAVNAIGKSEPSICTTPVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTP 1725
+ +I + GK + S + + ++ + + L +Q A G
Sbjct: 75 IYEVILKDDRGKDK-SRLKLVDE-------AFKELMMEVCKKIALSATDLKIQSTAEGIQ 126
Query: 1726 VPKC----------RWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNS 1775
+ W NG I R + G L NE T D G Y E ++
Sbjct: 127 LYSFVTYYVEDLKVNWSHNGSAIRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDG 186
Query: 1776 VGFAHTSSRVKI---------------------GTPPRIDRMPNALYIPEGDNTKVKIFY 1814
+ + + +P+ + I EG +
Sbjct: 187 KTGHQKTVDLSGQAYDEAYAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGKALNLTCNV 246
Query: 1815 AGDQPMEVSLTKNGRVVQSDDRFKFTV-LDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVS 1873
GD P EVS KN + + SDD I + D+G Y + + N GS +
Sbjct: 247 WGDPPPEVSWLKNEKALASDDHCNLKFEAGRTAYFTINGVSTADSGKYGLVVKNKYGSET 306
Query: 1874 GTFTINI 1880
FT+++
Sbjct: 307 SDFTVSV 313
Score = 101 bits (252), Expect = 6e-23
Identities = 55/382 (14%), Positives = 101/382 (26%), Gaps = 77/382 (20%)
Query: 1131 PPCAPKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPI-WTVNGDEVSPDGRIKFETSE 1189
P P LS V + + K T I W + E+S D + F+
Sbjct: 4 PFTGPHFVEYLSW---EVTGECNVLLKCKVANIKKETHIVWYKDEREISVDEKHDFKDGI 60
Query: 1190 NQTIYRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYVVDKPSPPQGPLDVSDITPESCS 1249
+ S K D+G Y + L + G D + K+ ++
Sbjct: 61 CTLLITEFSKK---DAGIYEVILKDDRGKDKSRLKLVDEAFKELMMEVCKKIALSATDLK 117
Query: 1250 LSWKPPLDDGGSPITNYVVEKYESATGFWSKLSSFVRSPAYDVFGLETNRQYRFRVRAEN 1309
+ G + ++V E WS N
Sbjct: 118 I----QSTAEGIQLYSFVTYYVEDLKVNWSH-----------------NGS--------- 147
Query: 1310 QYGVSEPLELDNSITAKFPFTVPDPPGQPQIVDWDTNNATLMWDRPR-TDGGSKIQGYKM 1368
+ + + L + P D G Y M
Sbjct: 148 ------AIRYSDRVKTGV----------------TGEQIWLQINEPTPNDKGK----YVM 181
Query: 1369 LLKTPTGELPTTIWSKIRPTSSTVYCKDTTMNSSNSEPGKQSGPVIVEEQPNKPVMDLSG 1428
L T+ + ++ +E + ++ P+
Sbjct: 182 ELFDGKTGHQKTVDLSGQAYDEAYAEFQRLKQAAIAEKNR---ARVLGGLPD-------- 230
Query: 1429 VRDITVKAGEDFSIHVPFMAFPQPAAFWFANDSIIDDSDTRVHKQLTMNSASLVVKNSQR 1488
+T++ G+ ++ P P W N+ + D K +A +
Sbjct: 231 --VVTIQEGKALNLTCNVWGDPPPEVSWLKNEKALASDDHCNLKFEAGRTAYFTINGVST 288
Query: 1489 SDGGQYRLQLKNPAGFDTATLH 1510
+D G+Y L +KN G +T+
Sbjct: 289 ADSGKYGLVVKNKYGSETSDFT 310
Score = 89.2 bits (221), Expect = 6e-19
Identities = 27/135 (20%), Positives = 46/135 (34%), Gaps = 14/135 (10%)
Query: 63 IAVNAIGKSEPSI------------CTTPVKICEFVGGEKPDFIVPLKDLV-VPLGKLLT 109
+ + ++ +K + + L D+V + GK L
Sbjct: 182 ELFDGKTGHQKTVDLSGQAYDEAYAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGKALN 241
Query: 110 LQCEATGTPVPKCRWLRNGREISSGARYRV-ETAGGVFRLHFNEVTDVDNGDYTCEAYNS 168
L C G P P+ WL+N + ++S + AG N V+ D+G Y N
Sbjct: 242 LTCNVWGDPPPEVSWLKNEKALASDDHCNLKFEAGRTAYFTINGVSTADSGKYGLVVKNK 301
Query: 169 VGFAHTSSRVKIGTP 183
G + V + P
Sbjct: 302 YGSETSDFTVSVFIP 316
Score = 89.2 bits (221), Expect = 6e-19
Identities = 27/135 (20%), Positives = 46/135 (34%), Gaps = 14/135 (10%)
Query: 1670 IAVNAIGKSEPSI------------CTTPVKICEFVGGEKPDFIVPLKDLV-VPLGKLLT 1716
+ + ++ +K + + L D+V + GK L
Sbjct: 182 ELFDGKTGHQKTVDLSGQAYDEAYAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGKALN 241
Query: 1717 LQCEATGTPVPKCRWLRNGREISSGARYRV-ETAGGVFRLHFNEVTDVDNGDYTCEAYNS 1775
L C G P P+ WL+N + ++S + AG N V+ D+G Y N
Sbjct: 242 LTCNVWGDPPPEVSWLKNEKALASDDHCNLKFEAGRTAYFTINGVSTADSGKYGLVVKNK 301
Query: 1776 VGFAHTSSRVKIGTP 1790
G + V + P
Sbjct: 302 YGSETSDFTVSVFIP 316
Score = 88.0 bits (218), Expect = 1e-18
Identities = 25/139 (17%), Positives = 44/139 (31%), Gaps = 18/139 (12%)
Query: 2054 QYEFRVYAQNEAGLSLPSSASNSVQIKDPMAA--------------KAPEIIVPLRNANA 2099
+Y + + S Q D A +A +
Sbjct: 178 KYVME--LFDGKT-GHQKTVDLSGQAYDEAYAEFQRLKQAAIAEKNRARVLGGLPDVVTI 234
Query: 2100 IQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAE-GDTYTLIINSVYGVDADEY 2158
+ C + G P P +SWLK + + ++ E G T IN V D+ +Y
Sbjct: 235 QEGKALNLTCNVWGDPPPEVSWLKNEKALASDDHCNLKFEAGRTAYFTINGVSTADSGKY 294
Query: 2159 VCRAVNKGGVKSTKAELII 2177
NK G +++ + +
Sbjct: 295 GLVVKNKYGSETSDFTVSV 313
Score = 86.9 bits (215), Expect = 4e-18
Identities = 22/119 (18%), Positives = 40/119 (33%), Gaps = 5/119 (4%)
Query: 2086 KAPEIIVPLRNANAIQNHNAQFQCTITGCPK-PTISWLKGSREITPSARHHIFAEGDTYT 2144
P + L N +C + K I W K REI+ +H + T
Sbjct: 6 TGPHFVEYLSW-EVTGECNVLLKCKVANIKKETHIVWYKDEREISVDEKHDF--KDGICT 62
Query: 2145 LIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPRFRDTAYFESDVVVVV 2203
L+I DA Y + G ++ +L+ + + + A +D+ +
Sbjct: 63 LLITEFSKKDAGIYEVILKDDRGKDKSRLKLVDEAFKELMMEVC-KKIALSATDLKIQS 120
Score = 83.0 bits (205), Expect = 7e-17
Identities = 20/153 (13%), Positives = 42/153 (27%), Gaps = 18/153 (11%)
Query: 2056 EFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGC- 2114
+ V +++ G + + + E+++ + A+ + + Q T G
Sbjct: 75 IYEVILKDDRGKD---KSRLKLVDEAF-----KELMMEVCKKIALSATDLKIQSTAEGIQ 126
Query: 2115 ---------PKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNK 2165
++W I S R G+ L IN D +YV +
Sbjct: 127 LYSFVTYYVEDLKVNWSHNGSAIRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDG 186
Query: 2166 GGVKSTKAELIIMTAPKFNVPPRFRDTAYFESD 2198
+L + + A
Sbjct: 187 KTGHQKTVDLSGQAYDEAYAEFQRLKQAAIAEK 219
Score = 65.3 bits (159), Expect = 5e-11
Identities = 23/119 (19%), Positives = 41/119 (34%), Gaps = 1/119 (0%)
Query: 1110 AVNAAGQGPWSSSSDIIMCCAPPCAPKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPI 1169
+ A + A ++ L +T+ G+ +T G P P
Sbjct: 197 SGQAYDEAYAEFQRLKQAAIAEKNRARVLGGLP-DVVTIQEGKALNLTCNVWGDPPPEVS 255
Query: 1170 WTVNGDEVSPDGRIKFETSENQTIYRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYVV 1228
W N ++ D + +T Y + DSG Y + + N GS+++ V V
Sbjct: 256 WLKNEKALASDDHCNLKFEAGRTAYFTINGVSTADSGKYGLVVKNKYGSETSDFTVSVF 314
Score = 54.5 bits (131), Expect = 1e-07
Identities = 17/155 (10%), Positives = 45/155 (29%), Gaps = 10/155 (6%)
Query: 1105 EFRVCAVNAAGQGPWSSSSDIIMCCAPPCAPKITSD--LSIRDMTVLAGEE--FTITVPF 1160
+ V + G+ S ++ ++ LS D+ + + E +
Sbjct: 75 IYEVILKDDRGKD--KSRLKLVDEAFKELMMEVCKKIALSATDLKIQSTAEGIQLYSFVT 132
Query: 1161 SGRPKPTPIWTVNGDEVSPDGRIKFETSENQTIYRNKSAKRATDSGSYTIQLVNTVGSDS 1220
W+ NG + R+K + Q + D G Y ++L +
Sbjct: 133 YYVEDLKVNWSHNGSAIRYSDRVKTGVTGEQIWLQINEPTP-NDKGKYVMELFDGKTGHQ 191
Query: 1221 ASCKVYVVDKPSPPQGPLDVSDITPESCSLSWKPP 1255
+ + + + + + + + +
Sbjct: 192 KTVDLSGQ---AYDEAYAEFQRLKQAAIAEKNRAR 223
Score = 51.5 bits (123), Expect = 2e-06
Identities = 23/131 (17%), Positives = 44/131 (33%), Gaps = 4/131 (3%)
Query: 1409 QSGPVIVEEQPNKPVMDLSGVRDITVKAGEDFSIHVPFMAFPQPAAFWFANDSIIDDSDT 1468
++ ++ E K + + ++ + G V + W N S I SD
Sbjct: 96 EAFKELMMEVCKKIALSATDLKIQSTAEGIQLYSFVTY-YVEDLKVNWSHNGSAIRYSD- 153
Query: 1469 RVHKQLTMNSASLVVKNSQRSDGGQYRLQLKNPAG--FDTATLHSRLRTLPDSVNPRCHL 1526
RV +T L + +D G+Y ++L + T L + + R
Sbjct: 154 RVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDLSGQAYDEAYAEFQRLKQ 213
Query: 1527 PSSTSKERPKF 1537
+ K R +
Sbjct: 214 AAIAEKNRARV 224
Score = 41.4 bits (97), Expect = 0.002
Identities = 24/174 (13%), Positives = 45/174 (25%), Gaps = 30/174 (17%)
Query: 1410 SGPVIVEEQPNKPVMDLSGVRDITVKAGEDFSIHVPFMAFPQPAAF-WFANDSIIDDSDT 1468
+GP VE V + + + W+ ++ I +
Sbjct: 6 TGPHFVEYLSW------------EVTGECNVLLKCKVANIKKETHIVWYKDEREISVDE- 52
Query: 1469 RVHKQLTMNSASLVVKNSQRSDGGQYRLQLKNPAGFDTATLHSRLRTLPDSVNPRCHLPS 1528
+L++ + D G Y + LK+ G D + L +
Sbjct: 53 --KHDFKDGICTLLITEFSKKDAGIYEVILKDDRGKDKSRLKLVDEAFKE---------- 100
Query: 1529 STSKERPKFPTHPNHQPWLKWARASLTSKGVDSTEDSISLVWSKPRHDGGSPIQ 1582
+ K A V + + + WS GS I+
Sbjct: 101 LMMEVCKKIALSATDLKIQSTAEGIQLYSFVTYYVEDLKVNWSH----NGSAIR 150
>2crm_A Fibronectin type-III domain containing protein 3A; structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Length = 120
Score = 133 bits (336), Expect = 2e-36
Identities = 33/120 (27%), Positives = 45/120 (37%), Gaps = 3/120 (2%)
Query: 1217 GSDSASCKVYVVDKPSPPQGPLDVSDITPESCSLSWKPPLDDGGSPITNYVVEKYESATG 1276
GS DKP P P I S ++W PP D+GG+ I YVVE E + G
Sbjct: 4 GSSGVVEFTTCPDKPGIPVKPSVKGKIHSHSFKITWDPPKDNGGATINKYVVEMAEGSNG 63
Query: 1277 FWSKLSSFVRSPAYDVFGLETNRQYRFRVRAENQYGVSEPLELDNSITAKFPFTVPDPPG 1336
++ + + L YR RV + G S E S+ + P G
Sbjct: 64 NKWEMIYSGATREHLCDRLNPGCFYRLRVYCISDGGQSAVSE---SLLVQTPAVSGPSSG 120
Score = 122 bits (307), Expect = 2e-32
Identities = 29/122 (23%), Positives = 47/122 (38%), Gaps = 3/122 (2%)
Query: 261 SSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDIS 320
SSGS PG P+ P +I H+ + W+PPK +GG + YVVE + S
Sbjct: 2 SSGSSGVVEFTTCPDKPGIPVKPSVKGKIHSHSFKITWDPPKDNGGATINKYVVEMAEGS 61
Query: 321 MPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSP 380
+ + + + L G Y V +++ G E + ++P
Sbjct: 62 NGNKWEMIYSGATREHLCDRLNPGCFYRLRVYCISDGGQSAVSE---SLLVQTPAVSGPS 118
Query: 381 PG 382
G
Sbjct: 119 SG 120
Score = 122 bits (307), Expect = 2e-32
Identities = 29/122 (23%), Positives = 47/122 (38%), Gaps = 3/122 (2%)
Query: 1868 SSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDIS 1927
SSGS PG P+ P +I H+ + W+PPK +GG + YVVE + S
Sbjct: 2 SSGSSGVVEFTTCPDKPGIPVKPSVKGKIHSHSFKITWDPPKDNGGATINKYVVEMAEGS 61
Query: 1928 MPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSP 1987
+ + + + L G Y V +++ G E + ++P
Sbjct: 62 NGNKWEMIYSGATREHLCDRLNPGCFYRLRVYCISDGGQSAVSE---SLLVQTPAVSGPS 118
Query: 1988 PG 1989
G
Sbjct: 119 SG 120
Score = 116 bits (292), Expect = 2e-30
Identities = 29/109 (26%), Positives = 44/109 (40%), Gaps = 2/109 (1%)
Query: 656 GMDSAIVKIQISDRPDPPQFPTV-EDIGHDSLALVWRAPIWDGGSNITNYIVEKREHP-M 713
G + D+P P P+V I S + W P +GG+ I Y+VE E
Sbjct: 4 GSSGVVEFTTCPDKPGIPVKPSVKGKIHSHSFKITWDPPKDNGGATINKYVVEMAEGSNG 63
Query: 714 SSWIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITT 762
+ W + + L+PG Y RVY + G+S S + + T
Sbjct: 64 NKWEMIYSGATREHLCDRLNPGCFYRLRVYCISDGGQSAVSESLLVQTP 112
Score = 108 bits (271), Expect = 1e-27
Identities = 31/118 (26%), Positives = 45/118 (38%), Gaps = 7/118 (5%)
Query: 890 DEMVLIFEVLDRPHPPENLH-ADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDY-NSTV 947
+V D+P P + S + W PP+DNGG+ I YVVE + N
Sbjct: 6 SGVVEFTTCPDKPGIPVKPSVKGKIHSHSFKITWDPPKDNGGATINKYVVEMAEGSNGNK 65
Query: 948 WTKVSSYVTTPFVRVRNLAIGSTYEFRVMAENQYGLSKPALTIDPIKAKHPFDVPGAP 1005
W + S T + L G Y RV + G S + + + + P V G
Sbjct: 66 WEMIYSGATREHL-CDRLNPGCFYRLRVYCISDGGQSAVS---ESLLVQTP-AVSGPS 118
Score = 96.3 bits (240), Expect = 2e-23
Identities = 28/125 (22%), Positives = 49/125 (39%), Gaps = 8/125 (6%)
Query: 358 GMGPPLEGINPIKAKSPYDKPSPPGIP-VVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDK 416
G ++ + DKP P P V ++ ++WD P D+GG+ I Y ++
Sbjct: 1 GSSGSSG---VVEFTTCPDKPGIPVKPSVKGKIHSHSFKITWDPPKDNGGATINKYVVEM 57
Query: 417 HEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPM 476
E + + + A + L G Y RVY ++ G S S S+ ++ P
Sbjct: 58 AEGSNGNKWEM-IYSGATREHLCDRLNPGCFYRLRVYCISDGGQSAV---SESLLVQTPA 113
Query: 477 AAKAP 481
+
Sbjct: 114 VSGPS 118
Score = 96.3 bits (240), Expect = 2e-23
Identities = 28/125 (22%), Positives = 49/125 (39%), Gaps = 8/125 (6%)
Query: 1965 GMGPPLEGINPIKAKSPYDKPSPPGIP-VVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDK 2023
G ++ + DKP P P V ++ ++WD P D+GG+ I Y ++
Sbjct: 1 GSSGSSG---VVEFTTCPDKPGIPVKPSVKGKIHSHSFKITWDPPKDNGGATINKYVVEM 57
Query: 2024 HEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPM 2083
E + + + A + L G Y RVY ++ G S S S+ ++ P
Sbjct: 58 AEGSNGNKWEM-IYSGATREHLCDRLNPGCFYRLRVYCISDGGQSAV---SESLLVQTPA 113
Query: 2084 AAKAP 2088
+
Sbjct: 114 VSGPS 118
Score = 85.6 bits (212), Expect = 1e-19
Identities = 26/134 (19%), Positives = 38/134 (28%), Gaps = 34/134 (25%)
Query: 1000 DVPGAPGAPKGV-DSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPD 1058
D PG P P S + W P+ +GG+ I +Y+VE S+
Sbjct: 16 DKPGIPVKPSVKGKIHSHSFKITWDPPKDNGGATINKYVVEMAEGSNGNK---------- 65
Query: 1059 TSLKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGP 1118
W G+T + L Y RV ++ GQ
Sbjct: 66 -------WEM------IYSGATREH----------LCDRLNPGCFYRLRVYCISDGGQSA 102
Query: 1119 WSSSSDIIMCCAPP 1132
S S +
Sbjct: 103 VSESLLVQTPAVSG 116
Score = 70.2 bits (172), Expect = 4e-14
Identities = 19/122 (15%), Positives = 31/122 (25%), Gaps = 46/122 (37%)
Query: 1560 DSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEGK 1619
S + W P+ +GG+ I +Y+VE S+
Sbjct: 29 KIHSHSFKITWDPPKDNGGATINKYVVEMAEGSNGNK----------------------- 65
Query: 1620 SIGSERGSTAQFLEREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSE 1679
W Y+ L G Y R+ ++ G+S
Sbjct: 66 ---------------------WEMI--YSGATREHLCDRLNPGCFYRLRVYCISDGGQSA 102
Query: 1680 PS 1681
S
Sbjct: 103 VS 104
Score = 57.8 bits (140), Expect = 8e-10
Identities = 13/54 (24%), Positives = 20/54 (37%), Gaps = 3/54 (5%)
Query: 22 YIIERREVG-GAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPS 74
Y++E E G W Y+ L G Y R+ ++ G+S S
Sbjct: 53 YVVEMAEGSNGNKWEMI--YSGATREHLCDRLNPGCFYRLRVYCISDGGQSAVS 104
Score = 47.0 bits (112), Expect = 4e-06
Identities = 13/56 (23%), Positives = 23/56 (41%), Gaps = 4/56 (7%)
Query: 1312 GVSEPLELDNSITAKFPFTVPDPPGQPQIV-DWDTNNATLMWDRPRTDGGSKIQGY 1366
G S + T P P +P + +++ + WD P+ +GG+ I Y
Sbjct: 1 GSSGSSGVVEFTT---CPDKPGIPVKPSVKGKIHSHSFKITWDPPKDNGGATINKY 53
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor
tyrosine kinase, growth factor cytoki dimerization,
transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Length = 524
Score = 144 bits (364), Expect = 5e-36
Identities = 74/559 (13%), Positives = 145/559 (25%), Gaps = 85/559 (15%)
Query: 157 DNGDYTCEAY----NSVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQP 212
D+ C G + S +PP I + L + GD ++ G
Sbjct: 6 GAWDFLCVLLLLLRVQTGSSQPSVSPGEPSPPSIHPGKSDLIVRVGDEIRLLCTDPG--- 62
Query: 213 MEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTIN 272
V T ++++ ++ + G YT + + + +
Sbjct: 63 -FVKWTFEILDETNENKQN--------EWITEKAEATNTGKYTCTNKHGLSN---SIYVF 110
Query: 273 ITGLPGPPIGPLDVSEITKHT----CTLHWNPP-----KYDGGLKVTHYVVERRDISMPH 323
+ + + + C L K G + + D
Sbjct: 111 VRDPAKLFLVDRSLYGKEDNDTLVRCPLTDPEVTNYSLKGCQGKPLPKDLRFIPDPKAGI 170
Query: 324 WIC-ISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPG 382
I + H EG+ L + P P+ + S G
Sbjct: 171 MIKSVKRAYHRLCLHCSVDQEGKSVLSEKFILKV----RPAFKAVPVVSVSKASYLLREG 226
Query: 383 IPVV---TQVGGDF-VNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQIN 438
T V +W + S+ K + ++W + + +
Sbjct: 227 EEFTVTCTIKDVSSSVYSTWKRE----NSQT------KLQEKYNSWHHGDFNYERQATLT 276
Query: 439 IPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVP---LRNANAIQN 495
I + F YA N G ++ + ++++ D I +
Sbjct: 277 ISSARVNDSGVFMCYANNTFG---SANVTTTLEVVDK-----GFINIFPMINTTVFVNDG 328
Query: 496 HNAQFQCTITGCPKPT-ISWLKGSREITPSARHHIFAEGD-----TYTLIINSVYGVDAD 549
N PKP W+ +R T + +E + L + + G +
Sbjct: 329 ENVDLIVEYEAFPKPEHQQWIYMNRTFTDKWEDYPKSENESNIRYVSELHLTRLKGTEGG 388
Query: 550 EYVCRAVNKGGVKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKIT 609
Y N + + + N P D+ N +++ G+P+P I
Sbjct: 389 TYTFLVSNSDVNAAIAFNVYV------NTKPEILTY---DRLVNGMLQCVAAGFPEPTID 439
Query: 610 WYRDNEVIESGGHFHVETSERHAI------------LTIRDASNVDTAPYRVVAENDLGM 657
WY + + + +I ++ A ND+G
Sbjct: 440 WYFCPGTEQRCSASVLPVDVQTLNSSGPPFGKLVVQSSIDSSAFKHNGTVECKAYNDVGK 499
Query: 658 DSAIVKIQISDRPDPPQFP 676
SA P
Sbjct: 500 TSAYFNFAFKGNNKEQIHP 518
Score = 137 bits (345), Expect = 2e-33
Identities = 50/323 (15%), Positives = 100/323 (30%), Gaps = 35/323 (10%)
Query: 454 AQNEAGLSLPSSASNSVQIK-DPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPT- 511
E S S +K P P + V + + CTI
Sbjct: 188 VDQEGK----SVLSEKFILKVRPAFKAVPVVSVSKASYLLREGEEFTVTCTIKDVSSSVY 243
Query: 512 ISWLKGSREITPSARHHIFAEGDT-----YTLIINSVYGVDADEYVCRAVNKGGVKSTKA 566
+W + + + +++ + GD TL I+S D+ ++C A N G +
Sbjct: 244 STWKRENSQTKLQEKYNSWHHGDFNYERQATLTISSARVNDSGVFMCYANNTFGSANVTT 303
Query: 567 ELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPK-ITWYRDNEVIESGGHFHV 625
L ++ N+ P T + + GENV + + + +PKP+ W N +
Sbjct: 304 TLEVVDKGFINIFPMINTTVFVNDGENVDLIVEYEAFPKPEHQQWIYMNRTFTDKWEDYP 363
Query: 626 ETSERHAI-----LTIRDASNVDTAPYRVVAENDLGMDSAIVKIQISDRPDPPQFPTVED 680
++ I L + + Y + N + + ++ P+ T +
Sbjct: 364 KSENESNIRYVSELHLTRLKGTEGGTYTFLVSNSDVNAAIAFNVYVN---TKPEILTYDR 420
Query: 681 ----------IGHDSLALVWRAPIWDGGSNITNY--IVEKREHPMSSWIRVGNTRFTTMA 728
G + W + G+ ++ ++S +
Sbjct: 421 LVNGMLQCVAAGFPEPTIDWY---FCPGTEQRCSASVLPVDVQTLNSSGPPFGKLVVQSS 477
Query: 729 ITGLSPGHQYEFRVYAENVYGRS 751
I + H A N G++
Sbjct: 478 IDSSAFKHNGTVECKAYNDVGKT 500
Score = 124 bits (313), Expect = 1e-29
Identities = 82/560 (14%), Positives = 150/560 (26%), Gaps = 98/560 (17%)
Query: 62 IIAVNAIGKSEPSICTTPVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPK 121
++ G S+PS+ P DL+V +G + L C G
Sbjct: 16 LLLRVQTGSSQPSV--------SPGEPSPPSIHPGKSDLIVRVGDEIRLLCTDPGFV--- 64
Query: 122 CRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIG 181
+W + ++ + + + G YTC + + S V +
Sbjct: 65 -KWTFEILDETNENKQN--------EWITEKAEATNTGKYTCTNKHGLS---NSIYVFVR 112
Query: 182 TPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIII 241
P ++ + +LY E ++T V+ D + K + +F I+
Sbjct: 113 DPAKLFLVDRSLYGKEDNDTLVRCP-LTDPEVTNYSLKGCQGKPLPKDLRFIPDPKAGIM 171
Query: 242 FIKEIRKEDAGDYTVNLSNSSGSV-SGTFTINIT-GLPGPPIGPLDVSEITKH------- 292
R ++ SV S F + + P+ + +
Sbjct: 172 IKSVKRAYHRLCLHCSVDQEGKSVLSEKFILKVRPAFKAVPVVSVSKASYLLREGEEFTV 231
Query: 293 TCTLHWNPP------KYDGG-LKVTHYVVERRDISMPHWICISTTCHDTTFIVQGLTEGQ 345
TCT+ K + K+ + + T G
Sbjct: 232 TCTIKDVSSSVYSTWKRENSQTKLQEKYNSWHHGDFNYERQATLTISSARVNDSG----- 286
Query: 346 EYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNL--------- 396
+ M N G + P V G+ V+L
Sbjct: 287 VF----MCYANNTFGSANVTTTLEVVDKGFINIFPMINTTVFVNDGENVDLIVEYEAFPK 342
Query: 397 ----SWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRV 452
W W D + +++ R S++++ L +
Sbjct: 343 PEHQQWIYM----NRTFTDKWEDYPKSENESNIRYV------SELHLTRLKGTEGGTYTF 392
Query: 453 YAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTI 512
N + + + +V + PEI+ + N QC G P+PTI
Sbjct: 393 LVSNSDVNA---AIAFNVYVNTK-----PEILT------YDRLVNGMLQCVAAGFPEPTI 438
Query: 513 SWLKG-------SREITPSARHHIFAEGDTY-----TLIINSVYGVDADEYVCRAVNKGG 560
W S + P + + G + I+S C+A N G
Sbjct: 439 DWYFCPGTEQRCSASVLPVDVQTLNSSGPPFGKLVVQSSIDSSAFKHNGTVECKAYNDVG 498
Query: 561 VKSTKAELIIMTAPKFNVPP 580
S K + P
Sbjct: 499 KTSAYFNFAFKGNNKEQIHP 518
Score = 124 bits (313), Expect = 1e-29
Identities = 82/560 (14%), Positives = 150/560 (26%), Gaps = 98/560 (17%)
Query: 1669 IIAVNAIGKSEPSICTTPVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPK 1728
++ G S+PS+ P DL+V +G + L C G
Sbjct: 16 LLLRVQTGSSQPSV--------SPGEPSPPSIHPGKSDLIVRVGDEIRLLCTDPGFV--- 64
Query: 1729 CRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIG 1788
+W + ++ + + + G YTC + + S V +
Sbjct: 65 -KWTFEILDETNENKQN--------EWITEKAEATNTGKYTCTNKHGLS---NSIYVFVR 112
Query: 1789 TPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIII 1848
P ++ + +LY E ++T V+ D + K + +F I+
Sbjct: 113 DPAKLFLVDRSLYGKEDNDTLVRCP-LTDPEVTNYSLKGCQGKPLPKDLRFIPDPKAGIM 171
Query: 1849 FIKEIRKEDAGDYTVNLSNSSGSV-SGTFTINIT-GLPGPPIGPLDVSEITKH------- 1899
R ++ SV S F + + P+ + +
Sbjct: 172 IKSVKRAYHRLCLHCSVDQEGKSVLSEKFILKVRPAFKAVPVVSVSKASYLLREGEEFTV 231
Query: 1900 TCTLHWNPP------KYDGG-LKVTHYVVERRDISMPHWICISTTCHDTTFIVQGLTEGQ 1952
TCT+ K + K+ + + T G
Sbjct: 232 TCTIKDVSSSVYSTWKRENSQTKLQEKYNSWHHGDFNYERQATLTISSARVNDSG----- 286
Query: 1953 EYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNL--------- 2003
+ M N G + P V G+ V+L
Sbjct: 287 VF----MCYANNTFGSANVTTTLEVVDKGFINIFPMINTTVFVNDGENVDLIVEYEAFPK 342
Query: 2004 ----SWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRV 2059
W W D + +++ R S++++ L +
Sbjct: 343 PEHQQWIYM----NRTFTDKWEDYPKSENESNIRYV------SELHLTRLKGTEGGTYTF 392
Query: 2060 YAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTI 2119
N + + + +V + PEI+ + N QC G P+PTI
Sbjct: 393 LVSNSDVNA---AIAFNVYVNTK-----PEILT------YDRLVNGMLQCVAAGFPEPTI 438
Query: 2120 SWLKG-------SREITPSARHHIFAEGDTY-----TLIINSVYGVDADEYVCRAVNKGG 2167
W S + P + + G + I+S C+A N G
Sbjct: 439 DWYFCPGTEQRCSASVLPVDVQTLNSSGPPFGKLVVQSSIDSSAFKHNGTVECKAYNDVG 498
Query: 2168 VKSTKAELIIMTAPKFNVPP 2187
S K + P
Sbjct: 499 KTSAYFNFAFKGNNKEQIHP 518
Score = 112 bits (280), Expect = 2e-25
Identities = 74/537 (13%), Positives = 131/537 (24%), Gaps = 113/537 (21%)
Query: 1412 PVIVEEQPNKPVMDLSGVRDITVKAGEDFSIHVPFMAFPQPAAFWFANDSIIDDSDTRVH 1471
P I + D+ V+ G++ + F + W + +
Sbjct: 37 PSIHPGKS-----------DLIVRVGDEIRLLCTDPGFVK----WTFEILDETNEN---- 77
Query: 1472 KQLTMNSASLVVKNSQRSDGGQYRLQLKNPAGFDTATLHSRLRTLPDSVNPRCHLPSSTS 1531
+ + ++ ++ G+Y K+ +S + D S
Sbjct: 78 -----KQNEWITEKAEATNTGKYTCTNKHGLS------NSIYVFVRDPAKLFLVDRSLYG 126
Query: 1532 KERPKF-----PTHPNHQPWLKWARASLTSKGVDSTEDSISLVWSKPRHDGGSPIQRYIV 1586
KE T P + SL + + G I+ V
Sbjct: 127 KEDNDTLVRCPLTDPEVTNY------SLKGCQGKPLPKDLRFIPD---PKAGIMIKS--V 175
Query: 1587 EKRLISDDKWIKASMAHIPDTSLKYVLWVSEGKSIGSERGSTAQFLEREVGGAIWLKC-- 1644
++ S K++L V + G + C
Sbjct: 176 KRAYHRLCLHCSVDQEGKSVLSEKFILKVRPAFKAVPVVSVSKASYLLREGEEFTVTCTI 235
Query: 1645 ---------------------------NDYNVLECSFSVLNL--VEGNDY-EFRIIAVNA 1674
+ + + L + ND F A N
Sbjct: 236 KDVSSSVYSTWKRENSQTKLQEKYNSWHHGDFNYERQATLTISSARVNDSGVFMCYANNT 295
Query: 1675 IGKSEPSICTTPVKICEFVGGEKPDFIVP---LKDLVVPLGKLLTLQCEATGTPVPK-CR 1730
G + TT +++ +K + + V G+ + L E P P+ +
Sbjct: 296 FGSAN---VTTTLEV-----VDKGFINIFPMINTTVFVNDGENVDLIVEYEAFPKPEHQQ 347
Query: 1731 WLRNGREISSGARYRVETAG-----GVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRV 1785
W+ R + ++ V LH + + G YT NS A + V
Sbjct: 348 WIYMNRTFTDKWEDYPKSENESNIRYVSELHLTRLKGTEGGTYTFLVSNSDVNAAIAFNV 407
Query: 1786 KIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDY 1845
+ T P I L N ++ AG + Q V
Sbjct: 408 YVNTKPEI------LTYDRLVNGMLQCVAAGFPEPTIDWYFCPGTEQRCSASVLPVDVQT 461
Query: 1846 IIIF------------IKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPIGP 1890
+ I + G N G S F G I P
Sbjct: 462 LNSSGPPFGKLVVQSSIDSSAFKHNGTVECKAYNDVGKTSAYFNFAFKGNNKEQIHP 518
Score = 107 bits (267), Expect = 8e-24
Identities = 49/322 (15%), Positives = 95/322 (29%), Gaps = 41/322 (12%)
Query: 453 YAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTI 512
++ S V ++DP ++ + R+ ++++ +C +T P+ T
Sbjct: 98 TNKHGLS------NSIYVFVRDP-----AKLFLVDRSLYGKEDNDTLVRCPLTD-PEVTN 145
Query: 513 SWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMT 572
LKG + + +I + C +G + I+
Sbjct: 146 YSLKGCQGKPLPKDLRFIPDPKAGIMIKSVKRAYHRLCLHCSVDQEGKS-VLSEKFILKV 204
Query: 573 APKFNVPPRFRDTA---YFDKGENVVVKIPFTGYPKP-KITWYRDNEVIESGGHFHVE-- 626
P F P + +GE V TW R+N + ++
Sbjct: 205 RPAFKAVPVVSVSKASYLLREGEEFTVTCTIKDVSSSVYSTWKRENSQTKLQEKYNSWHH 264
Query: 627 ---TSERHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQISDRP----DPPQFPTVE 679
ER A LTI A D+ + A N G + +++ D+ P TV
Sbjct: 265 GDFNYERQATLTISSARVNDSGVFMCYANNTFGSANVTTTLEVVDKGFINIFPMINTTVF 324
Query: 680 DIGHDSLALVWRAP--------IW--DGGSNITNYIVEKREHPMSSWIRVGNTRFTTMAI 729
+++ L+ W + +K E S + + +
Sbjct: 325 VNDGENVDLIVEYEAFPKPEHQQWIYMNRT-----FTDKWEDYPKSENESNIRYVSELHL 379
Query: 730 TGLSPGHQYEFRVYAENVYGRS 751
T L + N +
Sbjct: 380 TRLKGTEGGTYTFLVSNSDVNA 401
Score = 102 bits (255), Expect = 3e-22
Identities = 59/452 (13%), Positives = 118/452 (26%), Gaps = 64/452 (14%)
Query: 1764 DNGDYTCEAY----NSVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQP 1819
D+ C G + S +PP I + L + GD ++ G
Sbjct: 6 GAWDFLCVLLLLLRVQTGSSQPSVSPGEPSPPSIHPGKSDLIVRVGDEIRLLCTDPG--- 62
Query: 1820 MEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTIN 1879
V T ++++ ++ + G YT + + + +
Sbjct: 63 -FVKWTFEILDETNENKQN--------EWITEKAEATNTGKYTCTNKHGLSN---SIYVF 110
Query: 1880 ITGLPGPPIGPLDVSEITKHT----CTLHWNPP-----KYDGGLKVTHYVVERRDISMPH 1930
+ + + + C L K G + + D
Sbjct: 111 VRDPAKLFLVDRSLYGKEDNDTLVRCPLTDPEVTNYSLKGCQGKPLPKDLRFIPDPKAGI 170
Query: 1931 WIC-ISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPG 1989
I + H EG+ L + P P+ + S G
Sbjct: 171 MIKSVKRAYHRLCLHCSVDQEGKSVLSEKFILKV----RPAFKAVPVVSVSKASYLLREG 226
Query: 1990 IPVV---TQVGGDF-VNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQIN 2045
T V +W + S+ K + ++W + + +
Sbjct: 227 EEFTVTCTIKDVSSSVYSTWKRE----NSQT------KLQEKYNSWHHGDFNYERQATLT 276
Query: 2046 IPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVP---LRNANAIQN 2102
I + F YA N G ++ + ++++ D I +
Sbjct: 277 ISSARVNDSGVFMCYANNTFG---SANVTTTLEVVDK-----GFINIFPMINTTVFVNDG 328
Query: 2103 HNAQFQCTITGCPKPT-ISWLKGSREITPSARHHIFAEGD-----TYTLIINSVYGVDAD 2156
N PKP W+ +R T + +E + L + + G +
Sbjct: 329 ENVDLIVEYEAFPKPEHQQWIYMNRTFTDKWEDYPKSENESNIRYVSELHLTRLKGTEGG 388
Query: 2157 EYVCRAVNKGGVKSTKAELIIMTAPKFNVPPR 2188
Y N + + + T P+ R
Sbjct: 389 TYTFLVSNSDVNAAIAFNVYVNTKPEILTYDR 420
Score = 81.6 bits (201), Expect = 1e-15
Identities = 27/152 (17%), Positives = 52/152 (34%), Gaps = 12/152 (7%)
Query: 2061 AQNEAGLSLPSSASNSVQIK-DPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPT- 2118
E S S +K P P + V + + CTI
Sbjct: 188 VDQEGK----SVLSEKFILKVRPAFKAVPVVSVSKASYLLREGEEFTVTCTIKDVSSSVY 243
Query: 2119 ISWLKGSREITPSARHHIFAEGDT-----YTLIINSVYGVDADEYVCRAVNKGGVKSTKA 2173
+W + + + +++ + GD TL I+S D+ ++C A N G +
Sbjct: 244 STWKRENSQTKLQEKYNSWHHGDFNYERQATLTISSARVNDSGVFMCYANNTFGSANVTT 303
Query: 2174 ELIIMTAPKFNVPPRFRDTAY-FESDVVVVVC 2204
L ++ N+ P T + + + V ++
Sbjct: 304 TLEVVDKGFINIFPMINTTVFVNDGENVDLIV 335
Score = 75.5 bits (185), Expect = 1e-13
Identities = 63/405 (15%), Positives = 115/405 (28%), Gaps = 62/405 (15%)
Query: 1134 APKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQTI 1193
P I S D+ V G+E + WT + + + +
Sbjct: 36 PPSIHPGKS--DLIVRVGDEIRLLC----TDPGFVKWTFEILDETNENK-------QNEW 82
Query: 1194 YRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYVVDKPSPPQGPLDVSDITPES----CS 1249
K+ AT++G YT + + + S V+V D + C
Sbjct: 83 ITEKA--EATNTGKYTCTNKHGLSN---SIYVFVRDPAKLFLVDRSLYGKEDNDTLVRCP 137
Query: 1250 LSWKPP-----LDDGGSPITNYVVEKYESATGFWSKLSSFVRSPAYDVFGLETNRQYRFR 1304
L+ G P+ + + G + S R+
Sbjct: 138 LTDPEVTNYSLKGCQGKPLPKDLRFIPDPKAGIM--IKSVKRAYHRLC--------LHCS 187
Query: 1305 VRAENQYGVSEPLELDNSITAKFPFTVPDPP-------GQP-----QIVDWDTNNATLMW 1352
V E + +SE L K V G+ I D ++ W
Sbjct: 188 VDQEGKSVLSEKFILKVRPAFKAVPVVSVSKASYLLREGEEFTVTCTIKDVSSS-VYSTW 246
Query: 1353 DRPRTDGGSKIQGYKMLLKTPTGELPTTIW-SKIRPTSSTVY-CKDTTMNSSNSEPGKQS 1410
R + + + E T+ S R S V+ C N+ S +
Sbjct: 247 KRENSQTKLQEKYNSWHHGDFNYERQATLTISSARVNDSGVFMC--YANNTFGSA--NVT 302
Query: 1411 GPVIVEEQPNKPVMDLSGVRDITVKAGEDFSIHVPFMAFPQPAAF-WFANDSIIDDSDTR 1469
+ V ++ + + V GE+ + V + AFP+P W + D
Sbjct: 303 TTLEVVDKG-FINIFPMINTTVFVNDGENVDLIVEYEAFPKPEHQQWIYMNRTFTDKWED 361
Query: 1470 ----VHKQLTMNSASLVVKNSQRSDGGQYRLQLKNPAGFDTATLH 1510
++ + L + + ++GG Y + N +
Sbjct: 362 YPKSENESNIRYVSELHLTRLKGTEGGTYTFLVSNSDVNAAIAFN 406
Score = 73.2 bits (179), Expect = 5e-13
Identities = 36/316 (11%), Positives = 82/316 (25%), Gaps = 38/316 (12%)
Query: 452 VYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPT 511
+ + + G S+ SV +P P I + + CT G
Sbjct: 16 LLLRVQTG-----SSQPSVSPGEP---SPPSIHPGKSDLIVRVGDEIRLLCTDPG----F 63
Query: 512 ISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIM 571
+ W + T + + I + +Y C + + +
Sbjct: 64 VKWTFEILDETNENKQN--------EWITEKAEATNTGKYTCTNKHGLS---NSIYVFVR 112
Query: 572 TAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSERH 631
K + R + Y + + +V+ P T P+ + + +
Sbjct: 113 DPAKLFLVDR---SLYGKEDNDTLVRCPLTD-PEVTNYSLKGCQGKPLPKDLRFIPDPKA 168
Query: 632 AILTIRDASNVDTAPYRVVAENDLG-MDSAIVKIQISDRPDPPQFPTVED-----IGHDS 685
I+ + + + S +++ +V +
Sbjct: 169 GIMIKSVKRAYHRLCLHCSVDQEGKSVLSEKFILKVRPAFKAVPVVSVSKASYLLREGEE 228
Query: 686 LALVWRAPIWDGGSNIT-----NYIVEKREHPMSSWIRVGNTRFTTMAITGLSPGHQYEF 740
+ T + + ++ R T+ I+ F
Sbjct: 229 FTVTCTIKDVSSSVYSTWKRENSQTKLQEKYNSWHHGDFNYERQATLTISSARVNDSGVF 288
Query: 741 RVYAENVYGRSDPSTT 756
YA N +G ++ +TT
Sbjct: 289 MCYANNTFGSANVTTT 304
Score = 63.5 bits (154), Expect = 4e-10
Identities = 24/132 (18%), Positives = 43/132 (32%), Gaps = 13/132 (9%)
Query: 1108 VC-AVNAAGQGPWSSSSDIIMCCAPPCAPKITSDLSIRDMTVLAGEEFTITVPFSGRPKP 1166
+C A N G ++ + + + + V GE + V + PKP
Sbjct: 289 MCYANNTFGS---ANVTTTLEVVDKGFINIFPMINT--TVFVNDGENVDLIVEYEAFPKP 343
Query: 1167 TPI-WTVNGDEVSPDGRIKFETSENQTIYRN-----KSAKRATDSGSYTIQLVNTVGSDS 1220
W + ++ I K T+ G+YT + N+ + +
Sbjct: 344 EHQQWIYMNRTFTDKWEDYPKSENESNIRYVSELHLTRLKG-TEGGTYTFLVSNSDVNAA 402
Query: 1221 ASCKVYVVDKPS 1232
+ VYV KP
Sbjct: 403 IAFNVYVNTKPE 414
Score = 63.1 bits (153), Expect = 7e-10
Identities = 21/110 (19%), Positives = 31/110 (28%), Gaps = 12/110 (10%)
Query: 94 IVPLKDLVVPLGKLLTLQCEATGTPVPKCRWL-------RNGREISSGARYRVETAGGVF 146
+ L LQC A G P P W R + + ++G F
Sbjct: 410 NTKPEILTYDRLVNGMLQCVAAGFPEPTIDWYFCPGTEQRCSASVLPVDVQTLNSSGPPF 469
Query: 147 -----RLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMPN 191
+ + NG C+AYN VG + P+
Sbjct: 470 GKLVVQSSIDSSAFKHNGTVECKAYNDVGKTSAYFNFAFKGNNKEQIHPH 519
Score = 63.1 bits (153), Expect = 7e-10
Identities = 21/110 (19%), Positives = 31/110 (28%), Gaps = 12/110 (10%)
Query: 1701 IVPLKDLVVPLGKLLTLQCEATGTPVPKCRWL-------RNGREISSGARYRVETAGGVF 1753
+ L LQC A G P P W R + + ++G F
Sbjct: 410 NTKPEILTYDRLVNGMLQCVAAGFPEPTIDWYFCPGTEQRCSASVLPVDVQTLNSSGPPF 469
Query: 1754 -----RLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMPN 1798
+ + NG C+AYN VG + P+
Sbjct: 470 GKLVVQSSIDSSAFKHNGTVECKAYNDVGKTSAYFNFAFKGNNKEQIHPH 519
Score = 62.0 bits (150), Expect = 1e-09
Identities = 27/142 (19%), Positives = 48/142 (33%), Gaps = 7/142 (4%)
Query: 1108 VCAVNAAGQGPWSSSSDIIMCCAPPCAPKITSDLSIRDMTVLAGEEFTITVPFSGRPKPT 1167
C+V+ G+ S + + A P ++ + + GEEFT+T
Sbjct: 185 HCSVDQEGKSVLSEKFILKVRPAFKAVPVVSVSKA--SYLLREGEEFTVTCTIKDVSSSV 242
Query: 1168 PI-WTVNGDEVSPDGRIKFETSENQTIYRNKSAK----RATDSGSYTIQLVNTVGSDSAS 1222
W + + + R + R DSG + NT GS + +
Sbjct: 243 YSTWKRENSQTKLQEKYNSWHHGDFNYERQATLTISSARVNDSGVFMCYANNTFGSANVT 302
Query: 1223 CKVYVVDKPSPPQGPLDVSDIT 1244
+ VVDK P+ + +
Sbjct: 303 TTLEVVDKGFINIFPMINTTVF 324
Score = 61.2 bits (148), Expect = 2e-09
Identities = 22/150 (14%), Positives = 45/150 (30%), Gaps = 17/150 (11%)
Query: 2060 YAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTI 2119
++ S V ++DP ++ + R+ ++++ +C +T P+ T
Sbjct: 98 TNKHGLS------NSIYVFVRDP-----AKLFLVDRSLYGKEDNDTLVRCPLTD-PEVTN 145
Query: 2120 SWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMT 2179
LKG + + +I + C +G + I+
Sbjct: 146 YSLKGCQGKPLPKDLRFIPDPKAGIMIKSVKRAYHRLCLHCSVDQEGKS-VLSEKFILKV 204
Query: 2180 APKFNVPPRFR----DTAYFESDVVVVVCV 2205
P F P E + V C
Sbjct: 205 RPAFKAVPVVSVSKASYLLREGEEFTVTCT 234
Score = 50.4 bits (120), Expect = 5e-06
Identities = 58/448 (12%), Positives = 106/448 (23%), Gaps = 95/448 (21%)
Query: 1144 RDMTVLAGEEFTITVPFSGRPKPTPIW--TVNGDEVSPDGRIKFETSENQTIYRNKSAKR 1201
R + + + P + P+ T G + D R + I KS KR
Sbjct: 122 RSLYGKEDNDTLVRCPLTD-PEVTNYSLKGCQGKPLPKDLRFIPDPKAGIMI---KSVKR 177
Query: 1202 ATDSGSYTIQLVNTVGS-DSASCKVYVVDKPS-PPQGPLDVSDIT--------------- 1244
A + S S + V P + +
Sbjct: 178 AYHRLCLHCSVDQEGKSVLSEKFILKVRPAFKAVPVVSVSKASYLLREGEEFTVTCTIKD 237
Query: 1245 -PESCSLSWKPPLDDGGSPITNYVVEKYESATGFWSKLSSFVRSP-----------AYDV 1292
S +WK ++ + + + + + + + S A +
Sbjct: 238 VSSSVYSTWK--RENSQTKLQEKYNSWHHGDFNYERQATLTISSARVNDSGVFMCYANNT 295
Query: 1293 FGLETNRQYRFRVRAENQYGVSEPLELDNSI----TAKFPFTVPDPPGQPQIVDWDTNNA 1348
FG N V + + + + P +P+ W N
Sbjct: 296 FG-SANVTTTLEVVDKGFINIFPMINTTVFVNDGENVDLIVEYEAFP-KPEHQQWIYMNR 353
Query: 1349 TLMWDRPRTDGGSKIQGYKMLLKTPTGELPTTIWSKIRPTSSTVYCKDTTMNSSNSEPGK 1408
T + EL + ++++ T Y T SNS+
Sbjct: 354 TFTDKWEDYPKSENESNIR-----YVSEL--HL-TRLKGTEGGTY----TFLVSNSDVNA 401
Query: 1409 Q-SGPVIVEEQPNKPVMDLSGVRDITVKAGEDFSIHVPFMAFPQPAAFWFANDSIIDDSD 1467
+ V V +P +T + + FP+P W+
Sbjct: 402 AIAFNVYVNTKP----------EILTYDRLVNGMLQCVAAGFPEPTIDWYFCPGTEQRCS 451
Query: 1468 TRVH-----------KQLTMNSASLVVKNSQRSDGGQYRLQLKNPAGFDTATLHSRLRTL 1516
V + +S G + N G +A +
Sbjct: 452 ASVLPVDVQTLNSSGPPFGKLVVQSSIDSSAFKHNGTVECKAYNDVGKTSAYFN--F--- 506
Query: 1517 PDSVNPRCHLPSSTSKERPKFPTHPNHQ 1544
K K HP+H
Sbjct: 507 -------------AFKGNNKEQIHPHHH 521
Score = 48.9 bits (116), Expect = 2e-05
Identities = 14/147 (9%), Positives = 32/147 (21%), Gaps = 22/147 (14%)
Query: 547 DADEYVC----RAVNKGGVKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTG 602
A +++C + G + P + G+ +
Sbjct: 6 GAWDFLCVLLLLLRVQTGSSQPSVSPGEPSPPSIHPGK---SDLIVRVGDEIR----LLC 58
Query: 603 YPKPKITWYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAPYRVVAENDLGMDSAIV 662
+ W + + A +T Y ++ L +
Sbjct: 59 TDPGFVKWTFEI--------LDETNENKQNEWITEKAEATNTGKYTCTNKHGLS---NSI 107
Query: 663 KIQISDRPDPPQFPTVEDIGHDSLALV 689
+ + D D+ LV
Sbjct: 108 YVFVRDPAKLFLVDRSLYGKEDNDTLV 134
Score = 48.1 bits (114), Expect = 3e-05
Identities = 20/146 (13%), Positives = 39/146 (26%), Gaps = 25/146 (17%)
Query: 2059 VYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPT 2118
+ + + G S+ SV +P P I + + CT G
Sbjct: 16 LLLRVQTG-----SSQPSVSPGEP---SPPSIHPGKSDLIVRVGDEIRLLCTDPG----F 63
Query: 2119 ISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIM 2178
+ W + T + + I + +Y C + + +
Sbjct: 64 VKWTFEILDETNENKQN--------EWITEKAEATNTGKYTCTNKHGLS---NSIYVFVR 112
Query: 2179 TAPKFNVPPRFRDTAYFESDVVVVVC 2204
K + R E + +V C
Sbjct: 113 DPAKLFLVD--RSLYGKEDNDTLVRC 136
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer,
immunoglobul domain, muscle protein, thick filament,
contractIle protein; 2.24A {Homo sapiens}
Length = 212
Score = 134 bits (340), Expect = 1e-35
Identities = 32/189 (16%), Positives = 62/189 (32%), Gaps = 20/189 (10%)
Query: 498 AQFQCTIT-GCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAV 556
Q +T ++W I S R G+ L IN D +YV
Sbjct: 20 IQLYSFVTYYVEDLKVNWSHNGSAIRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVMELF 79
Query: 557 NKGGVKSTKAELII---------------MTAPKFNVPPRFR---DTAYFDKGENVVVKI 598
+ +L + N D +G+ + +
Sbjct: 80 DGKTGHQKTVDLSGQAYDEAYAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGKALNLTC 139
Query: 599 PFTGYPKPKITWYRDNEVIESGGHFHVETSE-RHAILTIRDASNVDTAPYRVVAENDLGM 657
G P P+++W ++ + + H +++ R A TI S D+ Y +V +N G
Sbjct: 140 NVWGDPPPEVSWLKNEKALAQTDHCNLKFEAGRTAYFTINGVSTADSGKYGLVVKNKYGS 199
Query: 658 DSAIVKIQI 666
+++ + +
Sbjct: 200 ETSDFTVSV 208
Score = 126 bits (317), Expect = 1e-32
Identities = 41/207 (19%), Positives = 63/207 (30%), Gaps = 32/207 (15%)
Query: 99 DLVVPLGKLLTLQCEA----------TGTPVPKCRWLRNGREISSGARYRVETAGGVFRL 148
+ L +Q A K W NG I R + G L
Sbjct: 2 SSIALSATDLKIQSTAEGIQLYSFVTYYVEDLKVNWSHNGSAIRYSDRVKTGVTGEQIWL 61
Query: 149 HFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKI---------------------GTPPRID 187
NE T D G Y E ++ + + +
Sbjct: 62 QINEPTPNDKGKYVMELFDGKTGHQKTVDLSGQAYDEAYAEFQRLKQAAIAEKNRARVLG 121
Query: 188 RMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIF-IKEI 246
+P+ + I EG + GD P EVS KN + + D F I +
Sbjct: 122 GLPDVVTIQEGKALNLTCNVWGDPPPEVSWLKNEKALAQTDHCNLKFEAGRTAYFTINGV 181
Query: 247 RKEDAGDYTVNLSNSSGSVSGTFTINI 273
D+G Y + + N GS + FT+++
Sbjct: 182 STADSGKYGLVVKNKYGSETSDFTVSV 208
Score = 126 bits (317), Expect = 1e-32
Identities = 41/207 (19%), Positives = 63/207 (30%), Gaps = 32/207 (15%)
Query: 1706 DLVVPLGKLLTLQCEA----------TGTPVPKCRWLRNGREISSGARYRVETAGGVFRL 1755
+ L +Q A K W NG I R + G L
Sbjct: 2 SSIALSATDLKIQSTAEGIQLYSFVTYYVEDLKVNWSHNGSAIRYSDRVKTGVTGEQIWL 61
Query: 1756 HFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKI---------------------GTPPRID 1794
NE T D G Y E ++ + + +
Sbjct: 62 QINEPTPNDKGKYVMELFDGKTGHQKTVDLSGQAYDEAYAEFQRLKQAAIAEKNRARVLG 121
Query: 1795 RMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIF-IKEI 1853
+P+ + I EG + GD P EVS KN + + D F I +
Sbjct: 122 GLPDVVTIQEGKALNLTCNVWGDPPPEVSWLKNEKALAQTDHCNLKFEAGRTAYFTINGV 181
Query: 1854 RKEDAGDYTVNLSNSSGSVSGTFTINI 1880
D+G Y + + N GS + FT+++
Sbjct: 182 STADSGKYGLVVKNKYGSETSDFTVSV 208
Score = 90.7 bits (225), Expect = 3e-20
Identities = 27/123 (21%), Positives = 45/123 (36%), Gaps = 2/123 (1%)
Query: 63 IAVNAIGKSEPSICTTPVKICEFVGGEKPDFIVPLKDLV-VPLGKLLTLQCEATGTPVPK 121
+ ++ E +K + + L D+V + GK L L C G P P+
Sbjct: 89 VDLSGQAYDEAYAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGKALNLTCNVWGDPPPE 148
Query: 122 CRWLRNGREISSGARYRV-ETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKI 180
WL+N + ++ + AG N V+ D+G Y N G + V +
Sbjct: 149 VSWLKNEKALAQTDHCNLKFEAGRTAYFTINGVSTADSGKYGLVVKNKYGSETSDFTVSV 208
Query: 181 GTP 183
P
Sbjct: 209 FIP 211
Score = 90.7 bits (225), Expect = 3e-20
Identities = 27/123 (21%), Positives = 45/123 (36%), Gaps = 2/123 (1%)
Query: 1670 IAVNAIGKSEPSICTTPVKICEFVGGEKPDFIVPLKDLV-VPLGKLLTLQCEATGTPVPK 1728
+ ++ E +K + + L D+V + GK L L C G P P+
Sbjct: 89 VDLSGQAYDEAYAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGKALNLTCNVWGDPPPE 148
Query: 1729 CRWLRNGREISSGARYRV-ETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKI 1787
WL+N + ++ + AG N V+ D+G Y N G + V +
Sbjct: 149 VSWLKNEKALAQTDHCNLKFEAGRTAYFTINGVSTADSGKYGLVVKNKYGSETSDFTVSV 208
Query: 1788 GTP 1790
P
Sbjct: 209 FIP 211
Score = 87.2 bits (216), Expect = 4e-19
Identities = 22/115 (19%), Positives = 41/115 (35%), Gaps = 1/115 (0%)
Query: 457 EAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLK 516
+A + Q +A + + C + G P P +SWLK
Sbjct: 94 QAYDEAYAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGKALNLTCNVWGDPPPEVSWLK 153
Query: 517 GSREITPSARHHI-FAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELII 570
+ + + ++ F G T IN V D+ +Y NK G +++ + +
Sbjct: 154 NEKALAQTDHCNLKFEAGRTAYFTINGVSTADSGKYGLVVKNKYGSETSDFTVSV 208
Score = 87.2 bits (216), Expect = 4e-19
Identities = 22/115 (19%), Positives = 41/115 (35%), Gaps = 1/115 (0%)
Query: 2064 EAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLK 2123
+A + Q +A + + C + G P P +SWLK
Sbjct: 94 QAYDEAYAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGKALNLTCNVWGDPPPEVSWLK 153
Query: 2124 GSREITPSARHHI-FAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELII 2177
+ + + ++ F G T IN V D+ +Y NK G +++ + +
Sbjct: 154 NEKALAQTDHCNLKFEAGRTAYFTINGVSTADSGKYGLVVKNKYGSETSDFTVSV 208
Score = 76.1 bits (187), Expect = 3e-15
Identities = 15/93 (16%), Positives = 24/93 (25%), Gaps = 1/93 (1%)
Query: 2105 AQFQCTIT-GCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAV 2163
Q +T ++W I S R G+ L IN D +YV
Sbjct: 20 IQLYSFVTYYVEDLKVNWSHNGSAIRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVMELF 79
Query: 2164 NKGGVKSTKAELIIMTAPKFNVPPRFRDTAYFE 2196
+ +L + + A
Sbjct: 80 DGKTGHQKTVDLSGQAYDEAYAEFQRLKQAAIA 112
Score = 69.5 bits (170), Expect = 5e-13
Identities = 22/119 (18%), Positives = 40/119 (33%), Gaps = 1/119 (0%)
Query: 1110 AVNAAGQGPWSSSSDIIMCCAPPCAPKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPI 1169
+ A + A ++ L +T+ G+ +T G P P
Sbjct: 92 SGQAYDEAYAEFQRLKQAAIAEKNRARVLGGL-PDVVTIQEGKALNLTCNVWGDPPPEVS 150
Query: 1170 WTVNGDEVSPDGRIKFETSENQTIYRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYVV 1228
W N ++ + +T Y + DSG Y + + N GS+++ V V
Sbjct: 151 WLKNEKALAQTDHCNLKFEAGRTAYFTINGVSTADSGKYGLVVKNKYGSETSDFTVSVF 209
Score = 64.9 bits (158), Expect = 2e-11
Identities = 20/115 (17%), Positives = 41/115 (35%), Gaps = 4/115 (3%)
Query: 208 AGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSG 267
+ ++V+ + NG ++ DR K V + I + I E D G Y + L +
Sbjct: 28 YYVEDLKVNWSHNGSAIRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTGHQK 87
Query: 268 TFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMP 322
T ++ + + N + GGL + E + +++
Sbjct: 88 TVDLSGQAYDEAYAEFQRLKQAA----IAEKNRARVLGGLPDVVTIQEGKALNLT 138
Score = 64.9 bits (158), Expect = 2e-11
Identities = 20/115 (17%), Positives = 41/115 (35%), Gaps = 4/115 (3%)
Query: 1815 AGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSG 1874
+ ++V+ + NG ++ DR K V + I + I E D G Y + L +
Sbjct: 28 YYVEDLKVNWSHNGSAIRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTGHQK 87
Query: 1875 TFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMP 1929
T ++ + + N + GGL + E + +++
Sbjct: 88 TVDLSGQAYDEAYAEFQRLKQAA----IAEKNRARVLGGLPDVVTIQEGKALNLT 138
Score = 62.2 bits (151), Expect = 1e-10
Identities = 11/95 (11%), Positives = 27/95 (28%), Gaps = 2/95 (2%)
Query: 601 TGYPKPKITWYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAPYRVVAENDLGMDSA 660
K+ W + I + L I + + D Y + +
Sbjct: 28 YYVEDLKVNWSHNGSAIRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKT--GH 85
Query: 661 IVKIQISDRPDPPQFPTVEDIGHDSLALVWRAPIW 695
+ +S + + + + ++A RA +
Sbjct: 86 QKTVDLSGQAYDEAYAEFQRLKQAAIAEKNRARVL 120
Score = 61.0 bits (148), Expect = 4e-10
Identities = 23/121 (19%), Positives = 45/121 (37%), Gaps = 2/121 (1%)
Query: 1388 TSSTVYCKDTTMNSSNSEPGKQSGPVIVEEQPNKPVMDLSGVRDITVKAGEDFSIHVPFM 1447
TV + + +E + I E N+ + +T++ G+ ++
Sbjct: 85 HQKTVDLSGQAYDEAYAEFQRLKQAAIAE--KNRARVLGGLPDVVTIQEGKALNLTCNVW 142
Query: 1448 AFPQPAAFWFANDSIIDDSDTRVHKQLTMNSASLVVKNSQRSDGGQYRLQLKNPAGFDTA 1507
P P W N+ + +D K +A + +D G+Y L +KN G +T+
Sbjct: 143 GDPPPEVSWLKNEKALAQTDHCNLKFEAGRTAYFTINGVSTADSGKYGLVVKNKYGSETS 202
Query: 1508 T 1508
Sbjct: 203 D 203
Score = 52.9 bits (127), Expect = 2e-07
Identities = 12/112 (10%), Positives = 26/112 (23%), Gaps = 11/112 (9%)
Query: 1145 DMTVLAGEEFTI----------TVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQTIY 1194
L+ + I + W+ NG + R+K + Q
Sbjct: 2 SSIALSATDLKIQSTAEGIQLYSFVTYYVEDLKVNWSHNGSAIRYSDRVKTGVTGEQIWL 61
Query: 1195 RNKSAKRATDSGSYTIQLVNTVGSDSASCKVYVVDKPSPPQGPLDVSDITPE 1246
+ D G Y ++L + + + +
Sbjct: 62 QINEP-TPNDKGKYVMELFDGKTGHQKTVDLSGQAYDEAYAEFQRLKQAAIA 112
Score = 44.5 bits (105), Expect = 1e-04
Identities = 19/93 (20%), Positives = 30/93 (32%), Gaps = 3/93 (3%)
Query: 1450 PQPAAFWFANDSIIDDSDTRVHKQLTMNSASLVVKNSQRSDGGQYRLQLKNPAGFD--TA 1507
W N S I SD RV +T L + +D G+Y ++L + T
Sbjct: 31 EDLKVNWSHNGSAIRYSD-RVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTGHQKTV 89
Query: 1508 TLHSRLRTLPDSVNPRCHLPSSTSKERPKFPTH 1540
L + + R + K R +
Sbjct: 90 DLSGQAYDEAYAEFQRLKQAAIAEKNRARVLGG 122
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A
{Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4
b.1.1.4
Length = 395
Score = 138 bits (348), Expect = 9e-35
Identities = 42/225 (18%), Positives = 76/225 (33%), Gaps = 13/225 (5%)
Query: 449 EFRVYAQNEAGLSLPSSASNSVQIK---DPMAAKAPEIIVPLRNANAIQNHNAQFQCTIT 505
++ A+N A ++ + P ++ A C
Sbjct: 178 KYVCTAKNAAVDEEVVLVEYEIKGVTKDNSGYKGEPVPQYVSKDMMAKAGDVTMIYCMYG 237
Query: 506 GCPKPTISWLKGSREI--TPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNK-GGVK 562
P ++ K +++ P R L+ + D Y C N G +
Sbjct: 238 SNPMGYPNYFKNGKDVNGNPEDRITRHNRTSGKRLLFKTTLPEDEGVYTCEVDNGVGKPQ 297
Query: 563 STKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGH 622
+L +++APK+ P +G++V + TG P P + W + + + SGG
Sbjct: 298 KHSLKLTVVSAPKYEQKP--EKVIVVKQGQDVTIPCKVTGLPAPNVVWSHNAKPL-SGGR 354
Query: 623 FHVETSERHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQIS 667
V S L I+ N D Y A N+ G +Q++
Sbjct: 355 ATVTDSG----LVIKGVKNGDKGYYGCRATNEHGDKYFETLVQVN 395
Score = 128 bits (322), Expect = 2e-31
Identities = 45/233 (19%), Positives = 86/233 (36%), Gaps = 12/233 (5%)
Query: 48 SVLNLVEGNDYEFRIIAVNAIGKSEPSICTTPVKICEFVGG---EKPDFIVPLKDLVVPL 104
V + Y++ A NA E + +K +P KD++
Sbjct: 167 IVTKEDVSDIYKYVCTAKNAAVDEEVVLVEYEIKGVTKDNSGYKGEPVPQYVSKDMMAKA 226
Query: 105 GKLLTLQCEATGTPVPKCRWLRNGREISSGARYRV--ETAGGVFRLHFNEVTDVDNGDYT 162
G + + C P+ + +NG++++ R+ RL F D G YT
Sbjct: 227 GDVTMIYCMYGSNPMGYPNYFKNGKDVNGNPEDRITRHNRTSGKRLLFKTTLPEDEGVYT 286
Query: 163 CEAYNSVGFAHTSS-RVKIGTPPRIDRMP-NALYIPEGDNTKVKIFYAGDQPMEVSLTKN 220
CE N VG S ++ + + P+ ++ P + + +G + + G V + N
Sbjct: 287 CEVDNGVGKPQKHSLKLTVVSAPKYEQKPEKVIVVKQGQDVTIPCKVTGLPAPNVVWSHN 346
Query: 221 GRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINI 273
+ + + TV D ++ IK ++ D G Y +N G + +
Sbjct: 347 AKPLSGG---RATVTDSGLV--IKGVKNGDKGYYGCRATNEHGDKYFETLVQV 394
Score = 128 bits (322), Expect = 2e-31
Identities = 45/233 (19%), Positives = 86/233 (36%), Gaps = 12/233 (5%)
Query: 1655 SVLNLVEGNDYEFRIIAVNAIGKSEPSICTTPVKICEFVGG---EKPDFIVPLKDLVVPL 1711
V + Y++ A NA E + +K +P KD++
Sbjct: 167 IVTKEDVSDIYKYVCTAKNAAVDEEVVLVEYEIKGVTKDNSGYKGEPVPQYVSKDMMAKA 226
Query: 1712 GKLLTLQCEATGTPVPKCRWLRNGREISSGARYRV--ETAGGVFRLHFNEVTDVDNGDYT 1769
G + + C P+ + +NG++++ R+ RL F D G YT
Sbjct: 227 GDVTMIYCMYGSNPMGYPNYFKNGKDVNGNPEDRITRHNRTSGKRLLFKTTLPEDEGVYT 286
Query: 1770 CEAYNSVGFAHTSS-RVKIGTPPRIDRMP-NALYIPEGDNTKVKIFYAGDQPMEVSLTKN 1827
CE N VG S ++ + + P+ ++ P + + +G + + G V + N
Sbjct: 287 CEVDNGVGKPQKHSLKLTVVSAPKYEQKPEKVIVVKQGQDVTIPCKVTGLPAPNVVWSHN 346
Query: 1828 GRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINI 1880
+ + + TV D ++ IK ++ D G Y +N G + +
Sbjct: 347 AKPLSGG---RATVTDSGLV--IKGVKNGDKGYYGCRATNEHGDKYFETLVQV 394
Score = 106 bits (265), Expect = 5e-24
Identities = 30/211 (14%), Positives = 54/211 (25%), Gaps = 17/211 (8%)
Query: 479 KAPEIIVPLRNANAIQNHNAQFQCTITGCPKPT-ISWLKGSREITPSARHHIFAEGDTYT 537
K P + +N+ +C I G + SW K + + + + +
Sbjct: 5 KYPVLKDQPAEVLFRENNPTVLECIIEGNDQGVKYSWKKDGKSYNWQEHNAALRKDEG-S 63
Query: 538 LIINSVYGVDADEYVCRAVNKGG-VKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENVVV 596
L+ D Y C A G S +G +
Sbjct: 64 LVFLRPQASDEGHYQCFAETPAGVASSRVISFRKTYLIASPAKTH---EKTPIEGRPFQL 120
Query: 597 K-IPFTGYPKPKITWYRDN-------EVIESGGHFHVETSERHAILTIRDASNVDTAPYR 648
+ YPKP ITW + +V + + D Y
Sbjct: 121 DCVLPNAYPKPLITWKKRLSGADPNADVTDFDRRITAGPDGNLYFTIVTKEDVSDIYKYV 180
Query: 649 VVAENDLGMD---SAIVKIQISDRPDPPQFP 676
A+N + +I+ + +
Sbjct: 181 CTAKNAAVDEEVVLVEYEIKGVTKDNSGYKG 211
Score = 105 bits (264), Expect = 7e-24
Identities = 37/243 (15%), Positives = 70/243 (28%), Gaps = 33/243 (13%)
Query: 454 AQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTI-TGCPKPTI 512
A+ AG ++S + + I+ Q C + PKP I
Sbjct: 81 AETPAG----VASSRVISFR---KTYLIASPAKTHEKTPIEGRPFQLDCVLPNAYPKPLI 133
Query: 513 SWLKGSREITPSA-------RHHIFAEGDTYTLIINSVYGVDADEYVCRAVNK-GGVKST 564
+W K P+A R +G+ Y I+ D +YVC A N +
Sbjct: 134 TWKKRLSGADPNADVTDFDRRITAGPDGNLYFTIVTKEDVSDIYKYVCTAKNAAVDEEVV 193
Query: 565 KAELIIM----TAPKFNVPPRFR---DTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVI 617
E I + P + G+ ++ + P ++++ + +
Sbjct: 194 LVEYEIKGVTKDNSGYKGEPVPQYVSKDMMAKAGDVTMIYCMYGSNPMGYPNYFKNGKDV 253
Query: 618 E--SGGHFHVETSERHAILTIRDASNVDTAPYRVVAENDLGMD---SAIVKIQISDRPDP 672
L + D Y +N +G S + +
Sbjct: 254 NGNPEDRITRHNRTSGKRLLFKTTLPEDEGVYTCEVDNGVGKPQKHSLKLTVVS-----A 308
Query: 673 PQF 675
P++
Sbjct: 309 PKY 311
Score = 104 bits (260), Expect = 2e-23
Identities = 64/420 (15%), Positives = 119/420 (28%), Gaps = 53/420 (12%)
Query: 1785 VKIGTPPRIDRMPNALYIPEGDNTKVK-IFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLD 1843
+ + P + P + E + T ++ I DQ ++ S K+G+ + D
Sbjct: 1 LPVDKYPVLKDQPAEVLFRENNPTVLECIIEGNDQGVKYSWKKDGKSYNWQEHNAALRKD 60
Query: 1844 DYIIIFIKEIRKEDAGDYTVNLSNSSGSV-SGTFTINITGLPGPPIGPLDVSEITKHTCT 1902
+ ++ + D G Y +G S + T L P + + I
Sbjct: 61 EGSLV-FLRPQASDEGHYQCFAETPAGVASSRVISFRKTYLIASPAKTHEKTPIEGRPFQ 119
Query: 1903 LHWNPPKYDGGLKVT------HYVVERRDISMPHWICISTTCHDTTFIVQGLTEGQEYLF 1956
L P +T I + IV Y +
Sbjct: 120 LDCVLPNAYPKPLITWKKRLSGADPNADVTDFDRRITAGPDGNLYFTIVTKEDVSDIYKY 179
Query: 1957 HVMAVNENGM----GPPLEGINPIKAKSP-YDKPSPPGIP--VVTQVGGDFV-------- 2001
A N E K S +P P + ++ + G +
Sbjct: 180 VCTAKNAAVDEEVVLVEYEIKGVTKDNSGYKGEPVPQYVSKDMMAKAGDVTMIYCMYGSN 239
Query: 2002 ---NLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFR 2058
++ K G + G D+ + + + + + +
Sbjct: 240 PMGYPNYFK----NGKDVNGNPEDRITRHNRTSGKR---------LLFKTTLPEDEGVYT 286
Query: 2059 VYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIV-PLRNANAIQNHNAQFQCTITGCPKP 2117
N G P S + + P+ P + Q + C +TG P P
Sbjct: 287 CEVDNGVGK--PQKHSLKLTVVSA-----PKYEQKPEKVIVVKQGQDVTIPCKVTGLPAP 339
Query: 2118 TISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELII 2177
+ W ++ + R + L+I V D Y CRA N+ G K + + +
Sbjct: 340 NVVWSHNAKPL-SGGRATV----TDSGLVIKGVKNGDKGYYGCRATNEHGDKYFETLVQV 394
Score = 102 bits (255), Expect = 1e-22
Identities = 71/426 (16%), Positives = 123/426 (28%), Gaps = 82/426 (19%)
Query: 1409 QSGPVIVEEQPNKPVMDLSGVRDITVKAGEDFSIHVPFMAFPQPAAF-WFANDSIIDDSD 1467
PV+ + QP ++ + + Q + W + + +
Sbjct: 4 DKYPVLKD-QP----------AEVLFRENNPTVLECIIEGNDQGVKYSWKKDGKSYNWQE 52
Query: 1468 TRVHKQLTMNSASLVVKNSQRSDGGQYRLQLKNPAGFDT-ATLHSRLRTLPDSVNP---- 1522
+ + SLV Q SD G Y+ + PAG + + R L S
Sbjct: 53 HNAALRK--DEGSLVFLRPQASDEGHYQCFAETPAGVASSRVISFRKTYLIASPAKTHEK 110
Query: 1523 ----------RCHLPSSTSK-----ERPKFPTHPNHQPWLKWARASLTSKGVDSTEDSIS 1567
C LP++ K ++ PN R + G +
Sbjct: 111 TPIEGRPFQLDCVLPNAYPKPLITWKKRLSGADPNADVTDFDRRITAGPDGN----LYFT 166
Query: 1568 LVWSKPRHDGG-------SPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEGKS 1620
+V + D + V K + + + +YV K
Sbjct: 167 IVTKEDVSDIYKYVCTAKNAAVDEEVVLVEYEIKGVTKDNSGYKGEPVPQYVS-----KD 221
Query: 1621 IGSERGSTAQFLEREVGGA-----IWLKCNDYNVLECSFSVLNLVEGNDYEFRI------ 1669
+ ++ G + G + K + +
Sbjct: 222 MMAKAGDVTM-IYCMYGSNPMGYPNYFKNGKDVNGNPEDRITRHNRTSGKRLLFKTTLPE 280
Query: 1670 -------IAVNAIGKSEPSICTTPVKICEFVGGEKPDFIV-PLKDLVVPLGKLLTLQCEA 1721
N +GK + V P + P K +VV G+ +T+ C+
Sbjct: 281 DEGVYTCEVDNGVGKPQKHSLKLTVV-------SAPKYEQKPEKVIVVKQGQDVTIPCKV 333
Query: 1722 TGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHT 1781
TG P P W N + +S G R V +G L V + D G Y C A N G +
Sbjct: 334 TGLPAPNVVWSHNAKPLSGG-RATVTDSG----LVIKGVKNGDKGYYGCRATNEHGDKYF 388
Query: 1782 SSRVKI 1787
+ V++
Sbjct: 389 ETLVQV 394
Score = 96.5 bits (240), Expect = 6e-21
Identities = 36/221 (16%), Positives = 55/221 (24%), Gaps = 22/221 (9%)
Query: 88 GEKPDFIVPLKDLVVPLGKLLTLQCE-ATGTPVPKCRWLRNGREISSGA-------RYRV 139
+ G+ L C P P W + A R
Sbjct: 98 TYLIASPAKTHEKTPIEGRPFQLDCVLPNAYPKPLITWKKRLSGADPNADVTDFDRRITA 157
Query: 140 ETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSS-----------RVKIGTPPRIDR 188
G ++ + D Y C A N+ P
Sbjct: 158 GPDGNLYFTIVTKEDVSDIYKYVCTAKNAAVDEEVVLVEYEIKGVTKDNSGYKGEPVPQY 217
Query: 189 MPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSD--DRFKFTVLDDYIIIFIKEI 246
+ + GD T + Y + + KNG+ V + DR + K
Sbjct: 218 VSKDMMAKAGDVTMIYCMYGSNPMGYPNYFKNGKDVNGNPEDRITRHNRTSGKRLLFKTT 277
Query: 247 RKEDAGDYTVNLSNSSGSV-SGTFTINITGLPGPPIGPLDV 286
ED G YT + N G + + + P P V
Sbjct: 278 LPEDEGVYTCEVDNGVGKPQKHSLKLTVVSAPKYEQKPEKV 318
Score = 96.5 bits (240), Expect = 6e-21
Identities = 36/221 (16%), Positives = 55/221 (24%), Gaps = 22/221 (9%)
Query: 1695 GEKPDFIVPLKDLVVPLGKLLTLQCE-ATGTPVPKCRWLRNGREISSGA-------RYRV 1746
+ G+ L C P P W + A R
Sbjct: 98 TYLIASPAKTHEKTPIEGRPFQLDCVLPNAYPKPLITWKKRLSGADPNADVTDFDRRITA 157
Query: 1747 ETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSS-----------RVKIGTPPRIDR 1795
G ++ + D Y C A N+ P
Sbjct: 158 GPDGNLYFTIVTKEDVSDIYKYVCTAKNAAVDEEVVLVEYEIKGVTKDNSGYKGEPVPQY 217
Query: 1796 MPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSD--DRFKFTVLDDYIIIFIKEI 1853
+ + GD T + Y + + KNG+ V + DR + K
Sbjct: 218 VSKDMMAKAGDVTMIYCMYGSNPMGYPNYFKNGKDVNGNPEDRITRHNRTSGKRLLFKTT 277
Query: 1854 RKEDAGDYTVNLSNSSGSV-SGTFTINITGLPGPPIGPLDV 1893
ED G YT + N G + + + P P V
Sbjct: 278 LPEDEGVYTCEVDNGVGKPQKHSLKLTVVSAPKYEQKPEKV 318
Score = 95.7 bits (238), Expect = 1e-20
Identities = 27/187 (14%), Positives = 47/187 (25%), Gaps = 13/187 (6%)
Query: 89 EKPDFIVPLKDLVVPLGKLLTLQCEATGTPVP-KCRWLRNGREISSGAR-YRVETAGGVF 146
+ P +++ L+C G K W ++G+ + + G
Sbjct: 5 KYPVLKDQPAEVLFRENNPTVLECIIEGNDQGVKYSWKKDGKSYNWQEHNAALRKDEGS- 63
Query: 147 RLHFNEVTDVDNGDYTCEAYNSVGFAHT-SSRVKIGTPPRIDRMPNALYIPEGDNTKVKI 205
L F D G Y C A G A + + + EG ++
Sbjct: 64 -LVFLRPQASDEGHYQCFAETPAGVASSRVISFRKTYLIASPAKTHEKTPIEGRPFQLDC 122
Query: 206 FYAGDQPM--------EVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVN 257
P N V D R + + + D Y
Sbjct: 123 VLPNAYPKPLITWKKRLSGADPNADVTDFDRRITAGPDGNLYFTIVTKEDVSDIYKYVCT 182
Query: 258 LSNSSGS 264
N++
Sbjct: 183 AKNAAVD 189
Score = 95.7 bits (238), Expect = 1e-20
Identities = 27/187 (14%), Positives = 47/187 (25%), Gaps = 13/187 (6%)
Query: 1696 EKPDFIVPLKDLVVPLGKLLTLQCEATGTPVP-KCRWLRNGREISSGAR-YRVETAGGVF 1753
+ P +++ L+C G K W ++G+ + + G
Sbjct: 5 KYPVLKDQPAEVLFRENNPTVLECIIEGNDQGVKYSWKKDGKSYNWQEHNAALRKDEGS- 63
Query: 1754 RLHFNEVTDVDNGDYTCEAYNSVGFAHT-SSRVKIGTPPRIDRMPNALYIPEGDNTKVKI 1812
L F D G Y C A G A + + + EG ++
Sbjct: 64 -LVFLRPQASDEGHYQCFAETPAGVASSRVISFRKTYLIASPAKTHEKTPIEGRPFQLDC 122
Query: 1813 FYAGDQPM--------EVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVN 1864
P N V D R + + + D Y
Sbjct: 123 VLPNAYPKPLITWKKRLSGADPNADVTDFDRRITAGPDGNLYFTIVTKEDVSDIYKYVCT 182
Query: 1865 LSNSSGS 1871
N++
Sbjct: 183 AKNAAVD 189
Score = 90.4 bits (224), Expect = 8e-19
Identities = 23/151 (15%), Positives = 44/151 (29%), Gaps = 6/151 (3%)
Query: 2056 EFRVYAQNEAGLSLPSSASNSVQIK---DPMAAKAPEIIVPLRNANAIQNHNAQFQCTIT 2112
++ A+N A ++ + P ++ A C
Sbjct: 178 KYVCTAKNAAVDEEVVLVEYEIKGVTKDNSGYKGEPVPQYVSKDMMAKAGDVTMIYCMYG 237
Query: 2113 GCPKPTISWLKGSREI--TPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNK-GGVK 2169
P ++ K +++ P R L+ + D Y C N G +
Sbjct: 238 SNPMGYPNYFKNGKDVNGNPEDRITRHNRTSGKRLLFKTTLPEDEGVYTCEVDNGVGKPQ 297
Query: 2170 STKAELIIMTAPKFNVPPRFRDTAYFESDVV 2200
+L +++APK+ P DV
Sbjct: 298 KHSLKLTVVSAPKYEQKPEKVIVVKQGQDVT 328
Score = 76.1 bits (187), Expect = 4e-14
Identities = 18/121 (14%), Positives = 31/121 (25%), Gaps = 5/121 (4%)
Query: 2086 KAPEIIVPLRNANAIQNHNAQFQCTITGCPKPT-ISWLKGSREITPSARHHIFAEGDTYT 2144
K P + +N+ +C I G + SW K + + + + +
Sbjct: 5 KYPVLKDQPAEVLFRENNPTVLECIIEGNDQGVKYSWKKDGKSYNWQEHNAALRKDEG-S 63
Query: 2145 LIINSVYGVDADEYVCRAVNKGG-VKSTKAELIIMTAPKFNVPPRFRDTAYFESDVVVVV 2203
L+ D Y C A G S + E +
Sbjct: 64 LVFLRPQASDEGHYQCFAETPAGVASSRVISFRKTYLIASPAKT--HEKTPIEGRPFQLD 121
Query: 2204 C 2204
C
Sbjct: 122 C 122
Score = 65.3 bits (159), Expect = 1e-10
Identities = 30/156 (19%), Positives = 48/156 (30%), Gaps = 23/156 (14%)
Query: 2061 AQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTI-TGCPKPTI 2119
A+ AG ++S + + I+ Q C + PKP I
Sbjct: 81 AETPAG----VASSRVISFR---KTYLIASPAKTHEKTPIEGRPFQLDCVLPNAYPKPLI 133
Query: 2120 SWLKGSREITPSA-------RHHIFAEGDTYTLIINSVYGVDADEYVCRAVNK-GGVKST 2171
+W K P+A R +G+ Y I+ D +YVC A N +
Sbjct: 134 TWKKRLSGADPNADVTDFDRRITAGPDGNLYFTIVTKEDVSDIYKYVCTAKNAAVDEEVV 193
Query: 2172 KAELIIM----TAPKFNVPPRFRDTAYFESDVVVVV 2203
E I + P + Y D++
Sbjct: 194 LVEYEIKGVTKDNSGYKGEPVPQ---YVSKDMMAKA 226
Score = 62.2 bits (151), Expect = 1e-09
Identities = 64/423 (15%), Positives = 106/423 (25%), Gaps = 87/423 (20%)
Query: 1134 APKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPI-WTVNGDEVSPDGRIKFETSENQT 1192
P + + ++ + G + W +G + + +
Sbjct: 6 YPVLKDQPA--EVLFRENNPTVLECIIEGNDQGVKYSWKKDGKSYNWQEHNAALRKDEGS 63
Query: 1193 IYRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYVVDKPSPPQGPLDVSDITP---ESCS 1249
+ + +A+D G Y G AS +V K P + TP
Sbjct: 64 LVFLRP--QASDEGHYQCFAETPAG--VASSRVISFRKTYLIASPAKTHEKTPIEGRPFQ 119
Query: 1250 LSWKPPLDDGGSPITNYVVEKYESATGFWSKLSSFVRSPAYDVFGLETNRQYRFRVRAEN 1309
L P P W K R D T+ R +
Sbjct: 120 LDCVLP---NAYPKPLI----------TWKK-----RLSGADPNADVTDFDRRITAGPDG 161
Query: 1310 QYGVSEPLELDNSI------TAKFPFTVPDPPGQPQIVDWDTNNATLMWDRPRTDGGSK- 1362
+ + D S TAK + + T + + P SK
Sbjct: 162 NLYFTIVTKEDVSDIYKYVCTAKNAAVDEEVVLVEYEIKGVTKDNSGYKGEPVPQYVSKD 221
Query: 1363 ---IQGYKMLLK-----TPTGELPTTIWSK----IRPTSSTVYCKDTTMNS--------- 1401
G ++ P + K + + +
Sbjct: 222 MMAKAGDVTMIYCMYGSNPM---GYPNYFKNGKDVNGNPEDRITRHNRTSGKRLLFKTTL 278
Query: 1402 -----------SNS--EPGKQSGPVIVEEQP---NKPVMDLSGVRDITVKAGEDFSIHVP 1445
N +P K S + V P KP + I VK G+D +I
Sbjct: 279 PEDEGVYTCEVDNGVGKPQKHSLKLTVVSAPKYEQKP------EKVIVVKQGQDVTIPCK 332
Query: 1446 FMAFPQPAAFWFANDSIIDDSDTRVHKQLTMNSASLVVKNSQRSDGGQYRLQLKNPAGFD 1505
P P W N + + T+ + LV+K + D G Y + N G
Sbjct: 333 VTGLPAPNVVWSHNAKPLSGG------RATVTDSGLVIKGVKNGDKGYYGCRATNEHGDK 386
Query: 1506 TAT 1508
Sbjct: 387 YFE 389
Score = 56.5 bits (136), Expect = 7e-08
Identities = 32/155 (20%), Positives = 53/155 (34%), Gaps = 11/155 (7%)
Query: 1094 RVTSLIENHEYEFRVCAVNAAGQGPWSSSSDIIMCCAPPCAPKITSDLSI----RDMTVL 1149
VT + Y++ A NAA + + + +DM
Sbjct: 167 IVTKEDVSDIYKYVCTAKNAAVD-EEVVLVEYEIKGVTKDNSGYKGEPVPQYVSKDMMAK 225
Query: 1150 AGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKF---ETSENQTIYRNKSAKRATDSG 1206
AG+ I + P P + NG +V+ + + + + + + D G
Sbjct: 226 AGDVTMIYCMYGSNPMGYPNYFKNGKDVNGNPEDRITRHNRTSGKRLLFKTT--LPEDEG 283
Query: 1207 SYTIQLVNTVGSD-SASCKVYVVDKPSPPQGPLDV 1240
YT ++ N VG S K+ VV P Q P V
Sbjct: 284 VYTCEVDNGVGKPQKHSLKLTVVSAPKYEQKPEKV 318
Score = 49.5 bits (118), Expect = 1e-05
Identities = 21/94 (22%), Positives = 32/94 (34%), Gaps = 7/94 (7%)
Query: 1134 APKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQTI 1193
APK + + V G++ TI +G P P +W+ N + GR + +
Sbjct: 308 APKYEQKPE-KVIVVKQGQDVTIPCKVTGLPAPNVVWSHNAKPL-SGGRATV---TDSGL 362
Query: 1194 YRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYV 1227
D G Y + N G V V
Sbjct: 363 VIKGVKN--GDKGYYGCRATNEHGDKYFETLVQV 394
Score = 43.0 bits (101), Expect = 0.001
Identities = 26/184 (14%), Positives = 51/184 (27%), Gaps = 18/184 (9%)
Query: 1064 VLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPWSSSS 1123
W +GKS + + A + + + E ++ A AG +SS
Sbjct: 39 YSWKKDGKSYNWQEHNAALRKDEGSLVFLR----PQASDEGHYQCFAETPAGV---ASSR 91
Query: 1124 DIIMCCAPPCAPKITSDLSIRDMTVLAGEEFTIT-VPFSGRPKPTPIWTVNGDEVSPDGR 1182
I + + T + G F + V + PKP W P+
Sbjct: 92 VISFRKTYL--IASPAKT--HEKTPIEGRPFQLDCVLPNAYPKPLITWKKRLSGADPNAD 147
Query: 1183 I-----KFETSENQTIY-RNKSAKRATDSGSYTIQLVNTVGSDSASCKVYVVDKPSPPQG 1236
+ + + +Y + + +D Y N + Y + +
Sbjct: 148 VTDFDRRITAGPDGNLYFTIVTKEDVSDIYKYVCTAKNAAVDEEVVLVEYEIKGVTKDNS 207
Query: 1237 PLDV 1240
Sbjct: 208 GYKG 211
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase;
1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A
2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Length = 321
Score = 132 bits (335), Expect = 1e-33
Identities = 37/91 (40%), Positives = 54/91 (59%), Gaps = 6/91 (6%)
Query: 813 IKTSSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVS------HNLEKELIRK 866
K V D YDI EE+G+G F +V +CRE+ TG +AAKFI + +E I +
Sbjct: 5 FKQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIER 64
Query: 867 EIDIMNQLHHPKLINLHDAFEDDDEMVLIFE 897
E+ I+ Q+ H +I LHD +E+ ++VLI E
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILE 95
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens}
SCOP: d.144.1.7
Length = 321
Score = 132 bits (334), Expect = 1e-33
Identities = 33/80 (41%), Positives = 54/80 (67%), Gaps = 1/80 (1%)
Query: 818 VYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQLHHP 877
+Y+ Y I E++G G FG+VHRC E + + AKF+ V ++ L++KEI I+N H
Sbjct: 3 LYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK-GTDQVLVKKEISILNIARHR 61
Query: 878 KLINLHDAFEDDDEMVLIFE 897
+++LH++FE +E+V+IFE
Sbjct: 62 NILHLHESFESMEELVMIFE 81
>1uem_A KIAA1568 protein; immunoglobulin-like beta-sandwich fold, fibronectin
type III, structural genomics; NMR {Homo sapiens} SCOP:
b.1.2.1
Length = 117
Score = 125 bits (315), Expect = 1e-33
Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 6/120 (5%)
Query: 1218 SDSASCKVYVVDKPSPPQGPLDVSDITPESCSLSWKPPLDDGGSPITNYVVEKYE-SATG 1276
S S+ + D P PP P V+D+T S +LSW+P G P + Y++E + S +
Sbjct: 3 SGSSGKNYDLSDLPGPPSKPQ-VTDVTKNSVTLSWQPG-TPGTLPASAYIIEAFSQSVSN 60
Query: 1277 FWSKLSSFVRSPAYDVFGLETNRQYRFRVRAENQYGVSEPLELDNSITAKFPFTVPDPPG 1336
W +++ V++ Y V GL N Y F VRA N G+S+P + + + + G
Sbjct: 61 SWQTVANHVKTTLYTVRGLRPNTIYLFMVRAINPQGLSDPSPMSDPVRTQDS---GPSSG 117
Score = 120 bits (304), Expect = 5e-32
Identities = 35/110 (31%), Positives = 51/110 (46%), Gaps = 3/110 (2%)
Query: 658 DSAIVKIQISDRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSWI 717
S+ +SD P PP P V D+ +S+ L W+ G + YI+E +S+
Sbjct: 4 GSSGKNYDLSDLPGPPSKPQVTDVTKNSVTLSWQPGT-PGTLPASAYIIEAFSQSVSNSW 62
Query: 718 RVGNT--RFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKDT 765
+ + T + GL P Y F V A N G SDPS SD + T+D+
Sbjct: 63 QTVANHVKTTLYTVRGLRPNTIYLFMVRAINPQGLSDPSPMSDPVRTQDS 112
Score = 115 bits (291), Expect = 3e-30
Identities = 36/120 (30%), Positives = 58/120 (48%), Gaps = 6/120 (5%)
Query: 264 SVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMP- 322
S S +++ LPGPP P V+++TK++ TL W P G L + Y++E S+
Sbjct: 3 SGSSGKNYDLSDLPGPPSKPQ-VTDVTKNSVTLSWQPG-TPGTLPASAYIIEAFSQSVSN 60
Query: 323 HWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPG 382
W ++ T + V+GL YLF V A+N G+ P +P++ + D G
Sbjct: 61 SWQTVANHVKTTLYTVRGLRPNTIYLFMVRAINPQGLSDPSPMSDPVRTQ---DSGPSSG 117
Score = 115 bits (291), Expect = 3e-30
Identities = 36/120 (30%), Positives = 58/120 (48%), Gaps = 6/120 (5%)
Query: 1871 SVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMP- 1929
S S +++ LPGPP P V+++TK++ TL W P G L + Y++E S+
Sbjct: 3 SGSSGKNYDLSDLPGPPSKPQ-VTDVTKNSVTLSWQPG-TPGTLPASAYIIEAFSQSVSN 60
Query: 1930 HWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPG 1989
W ++ T + V+GL YLF V A+N G+ P +P++ + D G
Sbjct: 61 SWQTVANHVKTTLYTVRGLRPNTIYLFMVRAINPQGLSDPSPMSDPVRTQ---DSGPSSG 117
Score = 104 bits (262), Expect = 2e-26
Identities = 31/108 (28%), Positives = 49/108 (45%), Gaps = 2/108 (1%)
Query: 897 EVLDRPHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTV-WTKVSSYV 955
++ D P PP + +S+TL W P G + Y++E + + W V+++V
Sbjct: 11 DLSDLPGPPSKPQVTDVTKNSVTLSWQPGTP-GTLPASAYIIEAFSQSVSNSWQTVANHV 69
Query: 956 TTPFVRVRNLAIGSTYEFRVMAENQYGLSKPALTIDPIKAKHPFDVPG 1003
T VR L + Y F V A N GLS P+ DP++ + G
Sbjct: 70 KTTLYTVRGLRPNTIYLFMVRAINPQGLSDPSPMSDPVRTQDSGPSSG 117
Score = 102 bits (256), Expect = 2e-25
Identities = 30/103 (29%), Positives = 39/103 (37%), Gaps = 1/103 (0%)
Query: 373 SPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAIC 432
D P PP P VT V + V LSW +P G Y I+ +
Sbjct: 11 DLSDLPGPPSKPQVTDVTKNSVTLSW-QPGTPGTLPASAYIIEAFSQSVSNSWQTVANHV 69
Query: 433 APSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDP 475
+ + L Y F V A N GLS PS S+ V+ +D
Sbjct: 70 KTTLYTVRGLRPNTIYLFMVRAINPQGLSDPSPMSDPVRTQDS 112
Score = 102 bits (256), Expect = 2e-25
Identities = 30/103 (29%), Positives = 39/103 (37%), Gaps = 1/103 (0%)
Query: 1980 SPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAIC 2039
D P PP P VT V + V LSW +P G Y I+ +
Sbjct: 11 DLSDLPGPPSKPQVTDVTKNSVTLSW-QPGTPGTLPASAYIIEAFSQSVSNSWQTVANHV 69
Query: 2040 APSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDP 2082
+ + L Y F V A N GLS PS S+ V+ +D
Sbjct: 70 KTTLYTVRGLRPNTIYLFMVRAINPQGLSDPSPMSDPVRTQDS 112
Score = 92.4 bits (230), Expect = 5e-22
Identities = 32/138 (23%), Positives = 44/138 (31%), Gaps = 35/138 (25%)
Query: 998 PFDVPGAPGAPKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIP 1057
D+PG P P+ D T++S++L W +P G P YI+E S + H+
Sbjct: 12 LSDLPGPPSKPQVTDVTKNSVTLSW-QPGTPGTLPASAYIIEAFSQSVSNSWQTVANHVK 70
Query: 1058 DTSLKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQG 1117
T V L N Y F V A+N G
Sbjct: 71 TTLY--------------------------------TVRGLRPNTIYLFMVRAINPQGLS 98
Query: 1118 PWSSSSDIIMCCAPPCAP 1135
S SD + P
Sbjct: 99 DPSPMSDPVR--TQDSGP 114
Score = 76.6 bits (189), Expect = 2e-16
Identities = 24/130 (18%), Positives = 40/130 (30%), Gaps = 46/130 (35%)
Query: 1559 VDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEG 1618
D T++S++L W +P G P YI+E
Sbjct: 25 TDVTKNSVTLSW-QPGTPGTLPASAYIIEAF----------------------------- 54
Query: 1619 KSIGSERGSTAQFLEREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKS 1678
+ + +V ++V L Y F + A+N G S
Sbjct: 55 ----------------SQSVSNSWQTVANHVKTTLYTVRGLRPNTIYLFMVRAINPQGLS 98
Query: 1679 EPSICTTPVK 1688
+PS + PV+
Sbjct: 99 DPSPMSDPVR 108
Score = 70.1 bits (172), Expect = 3e-14
Identities = 17/60 (28%), Positives = 27/60 (45%)
Query: 22 YIIERREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPSICTTPVK 81
YIIE + + +V ++V L Y F + A+N G S+PS + PV+
Sbjct: 49 YIIEAFSQSVSNSWQTVANHVKTTLYTVRGLRPNTIYLFMVRAINPQGLSDPSPMSDPVR 108
Score = 49.7 bits (119), Expect = 4e-07
Identities = 25/105 (23%), Positives = 42/105 (40%), Gaps = 16/105 (15%)
Query: 1328 PFTVPDPPGQPQIVDWDTNNATLMWDRPRTDGGSKIQGYKMLLKTPTGELP-TTIWSKIR 1386
+P PP +PQ+ D N+ TL W +P T G Y + + + T+ + ++
Sbjct: 12 LSDLPGPPSKPQVTDVTKNSVTLSW-QPGTPGTLPASAYIIEAFSQSVSNSWQTVANHVK 70
Query: 1387 PTSSTVYCKDTTMNSS--------N----SEPGKQSGPVIVEEQP 1419
T TV + N+ N S+P S PV ++
Sbjct: 71 TTLYTV--RGLRPNTIYLFMVRAINPQGLSDPSPMSDPVRTQDSG 113
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor
protein tyrosine phosphatase; HET: NAG; 2.00A {Mus
musculus} PDB: 3jxa_A*
Length = 384
Score = 133 bits (337), Expect = 2e-33
Identities = 44/220 (20%), Positives = 73/220 (33%), Gaps = 13/220 (5%)
Query: 450 FRVYAQNEAG--LSLPSSASNSVQIKDPMAAKAPEIIV-PLRNANAIQNHNAQFQCTITG 506
+ N L ++ M P+I V A + + +C G
Sbjct: 172 YTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPAEKGTTVKLECFALG 231
Query: 507 CPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKA 566
P PTI W + + + G L I + DA Y C A N G K
Sbjct: 232 NPVPTILWRRADGKPIARKARRHKSNG---ILEIPNFQQEDAGSYECVAENSRGKNVAKG 288
Query: 567 ELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVE 626
+L P + + E+V + G PKP W ++ + + + +E
Sbjct: 289 QLTFYAQPNWVQIIN---DIHVAMEESVFWECKANGRPKPTYRWLKNGDPLLTRDRIQIE 345
Query: 627 TSERHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQI 666
L I + D Y+ VAEN G+ + ++ +
Sbjct: 346 QGT----LNITIVNLSDAGMYQCVAENKHGVIFSSAELSV 381
Score = 120 bits (302), Expect = 6e-29
Identities = 45/217 (20%), Positives = 80/217 (36%), Gaps = 12/217 (5%)
Query: 63 IAVNAIGKSEPSICTTPVKICE--FVGGEKPDFIV-PLKDLVVPLGKLLTLQCEATGTPV 119
+ N + + TP+ + +G +P V + + G + L+C A G PV
Sbjct: 175 VVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPAEKGTTVKLECFALGNPV 234
Query: 120 PKCRWLR-NGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRV 178
P W R +G+ I+ AR G+ L D G Y C A NS G ++
Sbjct: 235 PTILWRRADGKPIARKARRHKS--NGI--LEIPNFQQEDAGSYECVAENSRGKNVAKGQL 290
Query: 179 KIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDY 238
P ++ N +++ ++ + G KNG + + DR +
Sbjct: 291 TFYAQPNWVQIINDIHVAMEESVFWECKANGRPKPTYRWLKNGDPLLTRDRIQIE--QGT 348
Query: 239 IIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITG 275
+ I + DAG Y N G + + +++
Sbjct: 349 LN--ITIVNLSDAGMYQCVAENKHGVIFSSAELSVIA 383
Score = 120 bits (302), Expect = 6e-29
Identities = 45/217 (20%), Positives = 80/217 (36%), Gaps = 12/217 (5%)
Query: 1670 IAVNAIGKSEPSICTTPVKICE--FVGGEKPDFIV-PLKDLVVPLGKLLTLQCEATGTPV 1726
+ N + + TP+ + +G +P V + + G + L+C A G PV
Sbjct: 175 VVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPAEKGTTVKLECFALGNPV 234
Query: 1727 PKCRWLR-NGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRV 1785
P W R +G+ I+ AR G+ L D G Y C A NS G ++
Sbjct: 235 PTILWRRADGKPIARKARRHKS--NGI--LEIPNFQQEDAGSYECVAENSRGKNVAKGQL 290
Query: 1786 KIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDY 1845
P ++ N +++ ++ + G KNG + + DR +
Sbjct: 291 TFYAQPNWVQIINDIHVAMEESVFWECKANGRPKPTYRWLKNGDPLLTRDRIQIE--QGT 348
Query: 1846 IIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITG 1882
+ I + DAG Y N G + + +++
Sbjct: 349 LN--ITIVNLSDAGMYQCVAENKHGVIFSSAELSVIA 383
Score = 106 bits (266), Expect = 3e-24
Identities = 46/236 (19%), Positives = 68/236 (28%), Gaps = 33/236 (13%)
Query: 454 AQNEAGLSLPSSASNSVQIKDPMAAKAPEIIV-PLRNANAIQNHNAQFQCTIT-GCPKPT 511
A N G + S +++ A + + C + +
Sbjct: 82 ATNSFG----TIVSREAKLQ---FAYLENFKTRTRSTVSVRRGQGMVLLCGPPPHSGELS 134
Query: 512 ISWLKGSREITP-SARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGG---VKSTKAE 567
+W+ + R G L I V D Y C N V
Sbjct: 135 YAWIFNEYPSYQDNRRFVSQETG---NLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTP 191
Query: 568 LIIMT-------APKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDN-EVIES 619
LI+ PK V A +KG V ++ G P P I W R + + I
Sbjct: 192 LILRNDGVMGEYEPKIEVQFPETVPA--EKGTTVKLECFALGNPVPTILWRRADGKPIAR 249
Query: 620 GGHFHVETSERHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQISDRPDPPQF 675
H IL I + D Y VAEN G + A ++ P +
Sbjct: 250 KARRHKSNG----ILEIPNFQQEDAGSYECVAENSRGKNVAKGQLTFY---AQPNW 298
Score = 103 bits (258), Expect = 3e-23
Identities = 36/202 (17%), Positives = 62/202 (30%), Gaps = 16/202 (7%)
Query: 481 PEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLII 540
++ PL + + C + G PKP I W ++ + LI
Sbjct: 13 SHVMFPL----DSEEKKVKLSCEVKGNPKPHIRWKLNGTDVDIGMDFRYSVVDGS-LLIN 67
Query: 541 NSVYGVDADEYVCRAVNK-GGVKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVK-I 598
N DA Y C A N G + S +A+L F R T +G+ +V+
Sbjct: 68 NPNKTQDAGTYQCIATNSFGTIVSREAKLQFAYLENFKTRT--RSTVSVRRGQGMVLLCG 125
Query: 599 PFTGYPKPKITWYRDNE-VIESGGHFHVETSERHAILTIRDASNVDTAPYRVVAENDLGM 657
P + W + + F + + L I D Y V N +
Sbjct: 126 PPPHSGELSYAWIFNEYPSYQDNRRFVSQET---GNLYIAKVEKSDVGNYTCVVTNTVTN 182
Query: 658 D---SAIVKIQISDRPDPPQFP 676
+ + + ++
Sbjct: 183 HKVLGPPTPLILRNDGVMGEYE 204
Score = 103 bits (258), Expect = 3e-23
Identities = 42/185 (22%), Positives = 70/185 (37%), Gaps = 9/185 (4%)
Query: 88 GEKPDFIVPLKDLVVPL---GKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGG 144
G P F+ ++ PL K + L CE G P P RW NG ++ G +R G
Sbjct: 3 GSGPVFVQEPSHVMFPLDSEEKKVKLSCEVKGNPKPHIRWKLNGTDVDIGMDFRYSVVDG 62
Query: 145 VFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSS-RVKIGTPPRI-DRMPNALYIPEGDNTK 202
L N D G Y C A NS G + +++ R + + + G
Sbjct: 63 SL-LINNPNKTQDAGTYQCIATNSFGTIVSREAKLQFAYLENFKTRTRSTVSVRRGQGMV 121
Query: 203 VK-IFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNS 261
+ + + N D+R +F + + I ++ K D G+YT ++N+
Sbjct: 122 LLCGPPPHSGELSYAWIFNEYPSYQDNR-RFVSQETGNLY-IAKVEKSDVGNYTCVVTNT 179
Query: 262 SGSVS 266
+
Sbjct: 180 VTNHK 184
Score = 103 bits (258), Expect = 3e-23
Identities = 42/185 (22%), Positives = 70/185 (37%), Gaps = 9/185 (4%)
Query: 1695 GEKPDFIVPLKDLVVPL---GKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGG 1751
G P F+ ++ PL K + L CE G P P RW NG ++ G +R G
Sbjct: 3 GSGPVFVQEPSHVMFPLDSEEKKVKLSCEVKGNPKPHIRWKLNGTDVDIGMDFRYSVVDG 62
Query: 1752 VFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSS-RVKIGTPPRI-DRMPNALYIPEGDNTK 1809
L N D G Y C A NS G + +++ R + + + G
Sbjct: 63 SL-LINNPNKTQDAGTYQCIATNSFGTIVSREAKLQFAYLENFKTRTRSTVSVRRGQGMV 121
Query: 1810 VK-IFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNS 1868
+ + + N D+R +F + + I ++ K D G+YT ++N+
Sbjct: 122 LLCGPPPHSGELSYAWIFNEYPSYQDNR-RFVSQETGNLY-IAKVEKSDVGNYTCVVTNT 179
Query: 1869 SGSVS 1873
+
Sbjct: 180 VTNHK 184
Score = 101 bits (254), Expect = 1e-22
Identities = 83/416 (19%), Positives = 133/416 (31%), Gaps = 61/416 (14%)
Query: 181 GTPPRIDRMPNALYIPEGDNTKVKIFY---AGDQPMEVSLTKNGRVVQSDDRFKFTVLDD 237
G+ P + P+ + P K G+ + NG V F+++V+D
Sbjct: 3 GSGPVFVQEPSHVMFPLDSEEKKVKLSCEVKGNPKPHIRWKLNGTDVDIGMDFRYSVVDG 62
Query: 238 YIIIFIKEIRKEDAGDYTVNLSNSSGSV-SGTFTINITGLPGPPIGPLDVSEITK-HTCT 295
++I + +DAG Y +NS G++ S + L + +
Sbjct: 63 SLLI-NNPNKTQDAGTYQCIATNSFGTIVSREAKLQFAYLENFKTRTRSTVSVRRGQGMV 121
Query: 296 LHWNPPKYDGGLKVT-------HYVVERRDISMPH---WICIST-------TCHDTTFIV 338
L PP + G L Y RR +S +I TC T +
Sbjct: 122 LLCGPPPHSGELSYAWIFNEYPSYQDNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTVT 181
Query: 339 QGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQ--VGGD-FVN 395
G + G P I+ + P P+ G V + G+
Sbjct: 182 NHKVLGPPTPLILRNDGVMGEYEP-----KIEVQFPETVPAEKGTTVKLECFALGNPVPT 236
Query: 396 LSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQ 455
+ W + G I G + IPN + + A+
Sbjct: 237 ILWRR---ADGKPIARKARRHKSNGI---------------LEIPNFQQEDAGSYECVAE 278
Query: 456 NEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWL 515
N G + A + P + + + + + ++C G PKPT WL
Sbjct: 279 NSRG---KNVAKGQLTFYAQ-----PNWVQIINDIHVAMEESVFWECKANGRPKPTYRWL 330
Query: 516 KGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIM 571
K + R I + TL I V DA Y C A NK GV + AEL ++
Sbjct: 331 KNGDPLLTRDRIQI----EQGTLNITIVNLSDAGMYQCVAENKHGVIFSSAELSVI 382
Score = 101 bits (254), Expect = 1e-22
Identities = 83/416 (19%), Positives = 133/416 (31%), Gaps = 61/416 (14%)
Query: 1788 GTPPRIDRMPNALYIPEGDNTKVKIFY---AGDQPMEVSLTKNGRVVQSDDRFKFTVLDD 1844
G+ P + P+ + P K G+ + NG V F+++V+D
Sbjct: 3 GSGPVFVQEPSHVMFPLDSEEKKVKLSCEVKGNPKPHIRWKLNGTDVDIGMDFRYSVVDG 62
Query: 1845 YIIIFIKEIRKEDAGDYTVNLSNSSGSV-SGTFTINITGLPGPPIGPLDVSEITK-HTCT 1902
++I + +DAG Y +NS G++ S + L + +
Sbjct: 63 SLLI-NNPNKTQDAGTYQCIATNSFGTIVSREAKLQFAYLENFKTRTRSTVSVRRGQGMV 121
Query: 1903 LHWNPPKYDGGLKVT-------HYVVERRDISMPH---WICIST-------TCHDTTFIV 1945
L PP + G L Y RR +S +I TC T +
Sbjct: 122 LLCGPPPHSGELSYAWIFNEYPSYQDNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTVT 181
Query: 1946 QGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQ--VGGD-FVN 2002
G + G P I+ + P P+ G V + G+
Sbjct: 182 NHKVLGPPTPLILRNDGVMGEYEP-----KIEVQFPETVPAEKGTTVKLECFALGNPVPT 236
Query: 2003 LSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQ 2062
+ W + G I G + IPN + + A+
Sbjct: 237 ILWRR---ADGKPIARKARRHKSNGI---------------LEIPNFQQEDAGSYECVAE 278
Query: 2063 NEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWL 2122
N G + A + P + + + + + ++C G PKPT WL
Sbjct: 279 NSRG---KNVAKGQLTFYAQ-----PNWVQIINDIHVAMEESVFWECKANGRPKPTYRWL 330
Query: 2123 KGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIM 2178
K + R I + TL I V DA Y C A NK GV + AEL ++
Sbjct: 331 KNGDPLLTRDRIQI----EQGTLNITIVNLSDAGMYQCVAENKHGVIFSSAELSVI 382
Score = 96.1 bits (239), Expect = 8e-21
Identities = 45/249 (18%), Positives = 79/249 (31%), Gaps = 27/249 (10%)
Query: 63 IAVNAIGKSEPSICTTPVKICEFVGGEKPDFIV-PLKDLVVPLGKLLTLQCEAT-GTPVP 120
IA N+ G +I + K+ +F + V G+ + L C +
Sbjct: 81 IATNSFG----TIVSREAKL---QFAYLENFKTRTRSTVSVRRGQGMVLLCGPPPHSGEL 133
Query: 121 KCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFA-------- 172
W+ N R V G L+ +V D G+YTC N+V
Sbjct: 134 SYAWIFNEYPSYQDNRRFVSQETGN--LYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTP 191
Query: 173 ---HTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTK-NGRVVQSDD 228
+ P + P + +G K++ F G+ + + +G+ +
Sbjct: 192 LILRNDGVMGEYEPKIEVQFPETVPAEKGTTVKLECFALGNPVPTILWRRADGKPIARKA 251
Query: 229 RFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPIGPLDVSE 288
R + I+ I ++EDAG Y NS G + P D+
Sbjct: 252 RR---HKSNGILE-IPNFQQEDAGSYECVAENSRGKNVAKGQLTFYAQPNWVQIINDIHV 307
Query: 289 ITKHTCTLH 297
+ +
Sbjct: 308 AMEESVFWE 316
Score = 96.1 bits (239), Expect = 8e-21
Identities = 45/249 (18%), Positives = 79/249 (31%), Gaps = 27/249 (10%)
Query: 1670 IAVNAIGKSEPSICTTPVKICEFVGGEKPDFIV-PLKDLVVPLGKLLTLQCEAT-GTPVP 1727
IA N+ G +I + K+ +F + V G+ + L C +
Sbjct: 81 IATNSFG----TIVSREAKL---QFAYLENFKTRTRSTVSVRRGQGMVLLCGPPPHSGEL 133
Query: 1728 KCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFA-------- 1779
W+ N R V G L+ +V D G+YTC N+V
Sbjct: 134 SYAWIFNEYPSYQDNRRFVSQETGN--LYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTP 191
Query: 1780 ---HTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTK-NGRVVQSDD 1835
+ P + P + +G K++ F G+ + + +G+ +
Sbjct: 192 LILRNDGVMGEYEPKIEVQFPETVPAEKGTTVKLECFALGNPVPTILWRRADGKPIARKA 251
Query: 1836 RFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPIGPLDVSE 1895
R + I+ I ++EDAG Y NS G + P D+
Sbjct: 252 RR---HKSNGILE-IPNFQQEDAGSYECVAENSRGKNVAKGQLTFYAQPNWVQIINDIHV 307
Query: 1896 ITKHTCTLH 1904
+ +
Sbjct: 308 AMEESVFWE 316
Score = 87.2 bits (216), Expect = 6e-18
Identities = 30/151 (19%), Positives = 44/151 (29%), Gaps = 8/151 (5%)
Query: 2057 FRVYAQNEAG--LSLPSSASNSVQIKDPMAAKAPEIIV-PLRNANAIQNHNAQFQCTITG 2113
+ N L ++ M P+I V A + + +C G
Sbjct: 172 YTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPAEKGTTVKLECFALG 231
Query: 2114 CPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKA 2173
P PTI W + + + G L I + DA Y C A N G K
Sbjct: 232 NPVPTILWRRADGKPIARKARRHKSNG---ILEIPNFQQEDAGSYECVAENSRGKNVAKG 288
Query: 2174 ELIIMTAPKFNVPPRFRDTAYFESDVVVVVC 2204
+L P + D + V C
Sbjct: 289 QLTFYAQPNWVQII--NDIHVAMEESVFWEC 317
Score = 67.2 bits (164), Expect = 2e-11
Identities = 26/118 (22%), Positives = 41/118 (34%), Gaps = 7/118 (5%)
Query: 2088 PEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLII 2147
++ PL + + C + G PKP I W ++ + LI
Sbjct: 13 SHVMFPL----DSEEKKVKLSCEVKGNPKPHIRWKLNGTDVDIGMDFRYSVVDGS-LLIN 67
Query: 2148 NSVYGVDADEYVCRAVNK-GGVKSTKAELIIMTAPKFNVPPRFRDTAYFESDVVVVVC 2204
N DA Y C A N G + S +A+L F R + +V++C
Sbjct: 68 NPNKTQDAGTYQCIATNSFGTIVSREAKLQFAYLENFKTRTRSTVSVR-RGQGMVLLC 124
Score = 62.5 bits (152), Expect = 7e-10
Identities = 22/150 (14%), Positives = 35/150 (23%), Gaps = 19/150 (12%)
Query: 2061 AQNEAGLSLPSSASNSVQIKDPMAAKAPEIIV-PLRNANAIQNHNAQFQCTIT-GCPKPT 2118
A N G + S +++ A + + C + +
Sbjct: 82 ATNSFG----TIVSREAKLQ---FAYLENFKTRTRSTVSVRRGQGMVLLCGPPPHSGELS 134
Query: 2119 ISWLKGSREITP-SARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGG---VKSTKAE 2174
+W+ + R G L I V D Y C N V
Sbjct: 135 YAWIFNEYPSYQDNRRFVSQETG---NLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTP 191
Query: 2175 LIIMTAPKF-NVPPRFRDTAYFESDVVVVV 2203
LI+ P+ F V
Sbjct: 192 LILRNDGVMGEYEPKIEVQ--FPETVPAEK 219
Score = 57.2 bits (138), Expect = 3e-08
Identities = 26/97 (26%), Positives = 38/97 (39%), Gaps = 7/97 (7%)
Query: 1134 APKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQTI 1193
P I D+ V E +GRPKPT W NGD + RI+ E T+
Sbjct: 295 QPNWVQ--IINDIHVAMEESVFWECKANGRPKPTYRWLKNGDPLLTRDRIQI---EQGTL 349
Query: 1194 YRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYVVDK 1230
+D+G Y N G +S ++ V+ +
Sbjct: 350 NITIVNL--SDAGMYQCVAENKHGVIFSSAELSVIAE 384
Score = 53.3 bits (128), Expect = 5e-07
Identities = 21/106 (19%), Positives = 36/106 (33%), Gaps = 2/106 (1%)
Query: 572 TAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSERH 631
+ P F P + + V + G PKP I W + ++ G F +
Sbjct: 4 SGPVFVQEPSHVMFPLDSEEKKVKLSCEVKGNPKPHIRWKLNGTDVDIGMDFRYSVVD-G 62
Query: 632 AILTIRDASNVDTAPYRVVAENDLGMD-SAIVKIQISDRPDPPQFP 676
++L D Y+ +A N G S K+Q + +
Sbjct: 63 SLLINNPNKTQDAGTYQCIATNSFGTIVSREAKLQFAYLENFKTRT 108
Score = 51.8 bits (124), Expect = 2e-06
Identities = 20/108 (18%), Positives = 37/108 (34%), Gaps = 5/108 (4%)
Query: 1134 APKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQTI 1193
PKI + G + G P PT +W + + +++ I
Sbjct: 204 EPKIEVQFP-ETVPAEKGTTVKLECFALGNPVPTILWRRADGKPIARKARRHKSNGILEI 262
Query: 1194 YRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYVVDKPSPPQGPLDVS 1241
+ D+GSY N+ G + A ++ +P+ Q D+
Sbjct: 263 ----PNFQQEDAGSYECVAENSRGKNVAKGQLTFYAQPNWVQIINDIH 306
Score = 49.1 bits (117), Expect = 1e-05
Identities = 32/191 (16%), Positives = 52/191 (27%), Gaps = 24/191 (12%)
Query: 1324 TAKFPFTVPDPPGQPQIVDWDTNNATLMWDRPRTDGGSKIQGYKMLLKTPTGELPTTIWS 1383
P G+ W N D R + TG L I +
Sbjct: 119 GMVLLCGPPPHSGELSYA-WIFNEYPSYQDNRR---------FVSQ---ETGNL--YI-A 162
Query: 1384 KIRPTSSTVY-CK---DTTMNSSNSEPGKQSGPVIVEEQPNKPVMDLSGVRDITVKAGED 1439
K+ + Y C T + P +P +++ + + G
Sbjct: 163 KVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPAEKGTT 222
Query: 1440 FSIHVPFMAFPQPAAFWFANDSIIDDSDTRVHKQLTMNSASLVVKNSQRSDGGQYRLQLK 1499
+ + P P W D R H ++ L + N Q+ D G Y +
Sbjct: 223 VKLECFALGNPVPTILWRRADGKPIARKARRH----KSNGILEIPNFQQEDAGSYECVAE 278
Query: 1500 NPAGFDTATLH 1510
N G + A
Sbjct: 279 NSRGKNVAKGQ 289
Score = 46.0 bits (109), Expect = 9e-05
Identities = 21/104 (20%), Positives = 32/104 (30%), Gaps = 15/104 (14%)
Query: 1408 KQSGPVIVEEQPN---KPVMDLSGVRDITVKAGEDFSIHVPFMAFPQPAAFWFANDSIID 1464
G + QPN DI V E P+P W N +
Sbjct: 285 VAKGQLTFYAQPNWVQII-------NDIHVAMEESVFWECKANGRPKPTYRWLKNGDPLL 337
Query: 1465 DSDTRVHKQLTMNSASLVVKNSQRSDGGQYRLQLKNPAGFDTAT 1508
D R+ + +L + SD G Y+ +N G ++
Sbjct: 338 TRD-RIQ----IEQGTLNITIVNLSDAGMYQCVAENKHGVIFSS 376
Score = 45.2 bits (107), Expect = 2e-04
Identities = 16/117 (13%), Positives = 33/117 (28%), Gaps = 11/117 (9%)
Query: 1430 RDITVKAGEDFSIH-VPFMAFPQPAAFWFANDSIIDDSDTRVHKQLTMNSASLVVKNSQR 1488
++V+ G+ + P + + W N+ + R + + +L + ++
Sbjct: 110 STVSVRRGQGMVLLCGPPPHSGELSYAWIFNEYPSYQDNRRFV---SQETGNLYIAKVEK 166
Query: 1489 SDGGQYRLQLKNPAGFDTATLHSRLRTLPDSVNPRCHLPSSTSKERPKFPTHPNHQP 1545
SD G Y + N L + E P P
Sbjct: 167 SDVGNYTCVVTNTVTNHKVLGPPTPLILRND-------GVMGEYEPKIEVQFPETVP 216
Score = 44.4 bits (105), Expect = 4e-04
Identities = 20/110 (18%), Positives = 40/110 (36%), Gaps = 7/110 (6%)
Query: 1142 SIRDMTVLAGEEFTIT-VPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQTIYRNKSAK 1200
+ ++V G+ + P + + W N D R +F + E +Y K
Sbjct: 108 TRSTVSVRRGQGMVLLCGPPPHSGELSYAWIFNEYPSYQDNR-RFVSQETGNLYIAKV-- 164
Query: 1201 RATDSGSYTIQLVNTVGSD---SASCKVYVVDKPSPPQGPLDVSDITPES 1247
+D G+YT + NTV + + + + + + PE+
Sbjct: 165 EKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPET 214
Score = 41.7 bits (98), Expect = 0.003
Identities = 18/112 (16%), Positives = 38/112 (33%), Gaps = 4/112 (3%)
Query: 1131 PPCAPKITSDL-SIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSE 1189
P P + + ++ ++ G PKP W +NG +V ++ +
Sbjct: 2 PGSGPVFVQEPSHVMFPLDSEEKKVKLSCEVKGNPKPHIRWKLNGTDVDIGMDFRYSVVD 61
Query: 1190 NQTIYRNKSAKRATDSGSYTIQLVNTVGSD-SASCKVYVVDKPSPPQGPLDV 1240
+ N + + D+G+Y N+ G+ S K+ +
Sbjct: 62 GSLLINNPN--KTQDAGTYQCIATNSFGTIVSREAKLQFAYLENFKTRTRST 111
Score = 39.8 bits (93), Expect = 0.008
Identities = 24/107 (22%), Positives = 39/107 (36%), Gaps = 16/107 (14%)
Query: 1407 GKQSGPVIVEEQPNKPVMDLSGVRDITVKAGEDFSIHVPFMAFPQPAAFWFANDSIIDDS 1466
G SGPV V+E + V + + P+P W N + +D
Sbjct: 1 GPGSGPVFVQEPSH--------VMFPLDSEEKKVKLSCEVKGNPKPHIRWKLNGTDVDIG 52
Query: 1467 DTRVHKQLTMNSASLVVKNSQR-SDGGQYRLQLKNPAGFDTATLHSR 1512
+ ++ SL++ N + D G Y+ N G T+ SR
Sbjct: 53 MDFRY---SVVDGSLLINNPNKTQDAGTYQCIATNSFG----TIVSR 92
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif,
immunoglobulin-like domain, growth facto factor
receptor, extracellular; 2.10A {Homo sapiens} PDB:
1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E
1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Length = 231
Score = 128 bits (323), Expect = 4e-33
Identities = 40/232 (17%), Positives = 73/232 (31%), Gaps = 25/232 (10%)
Query: 466 ASNSVQIKDPMAAKAPEIIVPLRNANAIQN----HNAQFQCTITGCPKPTISWLKGSREI 521
A + V ++ +AP + + + +F+C G P PT+ WLK +E
Sbjct: 2 AEDFVS-ENSNNKRAPYWTNTEKMEKRLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEF 60
Query: 522 TPSARHHIF-AEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPP 580
R + ++LI+ SV D Y C N+ G + L ++ + P
Sbjct: 61 KQEHRIGGYKVRNQHWSLIMESVVPSDKGNYTCVVENEYGSINHTYHLDVVERSRH-RPI 119
Query: 581 RFRD-----TAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGG------HFHVETSE 629
+ G +V +P I W + E S + V
Sbjct: 120 LQAGLPANASTVV--GGDVEFVCKVYSDAQPHIQWIKHVEKNGSKYGPDGLPYLKVLKHS 177
Query: 630 RHAI-----LTIRDASNVDTAPYRVVAENDLGMDSAIVKIQISDRPDPPQFP 676
L + + + D Y N +G + + + + P
Sbjct: 178 GINSSNAEVLALFNVTEADAGEYICKVSNYIGQANQSAWLTVLPKQQAPGRE 229
Score = 119 bits (299), Expect = 5e-30
Identities = 38/214 (17%), Positives = 69/214 (32%), Gaps = 21/214 (9%)
Query: 88 GEKPDFIVPLK----DLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARY-RVETA 142
P + K VP + +C A G P+P RWL+NG+E R +
Sbjct: 13 KRAPYWTNTEKMEKRLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVR 72
Query: 143 GGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKI-----GTPPRIDRMPNALYIPE 197
+ L V D G+YTC N G + + + + P +P
Sbjct: 73 NQHWSLIMESVVPSDKGNYTCVVENEYGSINHTYHLDVVERSRHRPILQAGLPANASTVV 132
Query: 198 GDNT----------KVKIF-YAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEI 246
G + + I + +G + + ++ + +
Sbjct: 133 GGDVEFVCKVYSDAQPHIQWIKHVEKNGSKYGPDGLPYLKVLKHSGINSSNAEVLALFNV 192
Query: 247 RKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPP 280
+ DAG+Y +SN G + + + + P
Sbjct: 193 TEADAGEYICKVSNYIGQANQSAWLTVLPKQQAP 226
Score = 119 bits (299), Expect = 5e-30
Identities = 38/214 (17%), Positives = 69/214 (32%), Gaps = 21/214 (9%)
Query: 1695 GEKPDFIVPLK----DLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARY-RVETA 1749
P + K VP + +C A G P+P RWL+NG+E R +
Sbjct: 13 KRAPYWTNTEKMEKRLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVR 72
Query: 1750 GGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKI-----GTPPRIDRMPNALYIPE 1804
+ L V D G+YTC N G + + + + P +P
Sbjct: 73 NQHWSLIMESVVPSDKGNYTCVVENEYGSINHTYHLDVVERSRHRPILQAGLPANASTVV 132
Query: 1805 GDNT----------KVKIF-YAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEI 1853
G + + I + +G + + ++ + +
Sbjct: 133 GGDVEFVCKVYSDAQPHIQWIKHVEKNGSKYGPDGLPYLKVLKHSGINSSNAEVLALFNV 192
Query: 1854 RKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPP 1887
+ DAG+Y +SN G + + + + P
Sbjct: 193 TEADAGEYICKVSNYIGQANQSAWLTVLPKQQAP 226
Score = 88.0 bits (218), Expect = 3e-19
Identities = 25/142 (17%), Positives = 52/142 (36%), Gaps = 16/142 (11%)
Query: 454 AQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTIS 513
+NE G + + + + + + NA+ + + +F C + +P I
Sbjct: 95 VENEYGSI---NHTYHLDVVERSRHRPILQAGLPANASTVVGGDVEFVCKVYSDAQPHIQ 151
Query: 514 WLKGSRE-----------ITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVK 562
W+K + +H + L + +V DA EY+C+ N G
Sbjct: 152 WIKHVEKNGSKYGPDGLPYLKVLKHSGINSSNAEVLALFNVTEADAGEYICKVSNYIGQA 211
Query: 563 STKAELIIMTAPKFNVPPRFRD 584
+ A L ++ + P R ++
Sbjct: 212 NQSAWLTVLPKQQA--PGREKE 231
Score = 88.0 bits (218), Expect = 3e-19
Identities = 25/142 (17%), Positives = 52/142 (36%), Gaps = 16/142 (11%)
Query: 2061 AQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTIS 2120
+NE G + + + + + + NA+ + + +F C + +P I
Sbjct: 95 VENEYGSI---NHTYHLDVVERSRHRPILQAGLPANASTVVGGDVEFVCKVYSDAQPHIQ 151
Query: 2121 WLKGSRE-----------ITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVK 2169
W+K + +H + L + +V DA EY+C+ N G
Sbjct: 152 WIKHVEKNGSKYGPDGLPYLKVLKHSGINSSNAEVLALFNVTEADAGEYICKVSNYIGQA 211
Query: 2170 STKAELIIMTAPKFNVPPRFRD 2191
+ A L ++ + P R ++
Sbjct: 212 NQSAWLTVLPKQQA--PGREKE 231
Score = 83.0 bits (205), Expect = 2e-17
Identities = 26/123 (21%), Positives = 46/123 (37%), Gaps = 7/123 (5%)
Query: 2073 ASNSVQIKDPMAAKAPEIIVPLRNANAIQN----HNAQFQCTITGCPKPTISWLKGSREI 2128
A + V ++ +AP + + + +F+C G P PT+ WLK +E
Sbjct: 2 AEDFVS-ENSNNKRAPYWTNTEKMEKRLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEF 60
Query: 2129 TPSARHHIF-AEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPP 2187
R + ++LI+ SV D Y C N+ G + L ++ + P
Sbjct: 61 KQEHRIGGYKVRNQHWSLIMESVVPSDKGNYTCVVENEYGSINHTYHLDVVERSRH-RPI 119
Query: 2188 RFR 2190
Sbjct: 120 LQA 122
Score = 78.8 bits (194), Expect = 5e-16
Identities = 29/197 (14%), Positives = 58/197 (29%), Gaps = 34/197 (17%)
Query: 1626 GSTAQFLEREVGGA-----IWLKCNDYNVLECSFSVLNLVEGNDYEFRI----------- 1669
+T +F GG WLK N + V + +
Sbjct: 34 ANTVKF-RCPAGGNPMPTMRWLK-NGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNY 91
Query: 1670 --IAVNAIGKSEPSICTTPVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVP 1727
+ N G T + + E + +G + C+ P
Sbjct: 92 TCVVENEYGSIN---HTYHLDVVERSRHRPILQAGLPANASTVVGGDVEFVCKVYSDAQP 148
Query: 1728 KCRWLRNGREISSGA-----------RYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSV 1776
+W+++ + S ++ + L VT+ D G+Y C+ N +
Sbjct: 149 HIQWIKHVEKNGSKYGPDGLPYLKVLKHSGINSSNAEVLALFNVTEADAGEYICKVSNYI 208
Query: 1777 GFAHTSSRVKIGTPPRI 1793
G A+ S+ + + +
Sbjct: 209 GQANQSAWLTVLPKQQA 225
Score = 78.8 bits (194), Expect = 5e-16
Identities = 20/135 (14%), Positives = 44/135 (32%), Gaps = 14/135 (10%)
Query: 63 IAVNAIGKSEPSICTTPVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKC 122
+ N G T + + E + +G + C+ P
Sbjct: 94 VVENEYGSIN---HTYHLDVVERSRHRPILQAGLPANASTVVGGDVEFVCKVYSDAQPHI 150
Query: 123 RWLRNGREISSGA-----------RYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGF 171
+W+++ + S ++ + L VT+ D G+Y C+ N +G
Sbjct: 151 QWIKHVEKNGSKYGPDGLPYLKVLKHSGINSSNAEVLALFNVTEADAGEYICKVSNYIGQ 210
Query: 172 AHTSSRVKIGTPPRI 186
A+ S+ + + +
Sbjct: 211 ANQSAWLTVLPKQQA 225
Score = 64.5 bits (157), Expect = 4e-11
Identities = 29/107 (27%), Positives = 42/107 (39%), Gaps = 10/107 (9%)
Query: 1134 APKITSDLSI--RDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQ 1191
AP T+ + R V A P G P PT W NG E + RI NQ
Sbjct: 15 APYWTNTEKMEKRLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQ 74
Query: 1192 ----TIYRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYVVDKPSPP 1234
+ +S +D G+YT + N GS + + + VV++
Sbjct: 75 HWSLIM---ESVVP-SDKGNYTCVVENEYGSINHTYHLDVVERSRHR 117
Score = 61.5 bits (149), Expect = 4e-10
Identities = 21/122 (17%), Positives = 39/122 (31%), Gaps = 10/122 (8%)
Query: 566 AELIIMTAPKFNVPPRFRDTAYFDK-------GENVVVKIPFTGYPKPKITWYRDNEVIE 618
AE + P + +T +K V + P G P P + W ++ + +
Sbjct: 2 AEDFVSENSNNKRAPYWTNTEKMEKRLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFK 61
Query: 619 SGGHFHV-ETSERHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQISDRPD--PPQF 675
+ +H L + D Y V EN+ G + + + +R P
Sbjct: 62 QEHRIGGYKVRNQHWSLIMESVVPSDKGNYTCVVENEYGSINHTYHLDVVERSRHRPILQ 121
Query: 676 PT 677
Sbjct: 122 AG 123
Score = 60.3 bits (146), Expect = 8e-10
Identities = 22/138 (15%), Positives = 43/138 (31%), Gaps = 13/138 (9%)
Query: 1110 AVNAAGQGPWSSSSDIIMCCAPPCAPKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPI 1169
N G + D++ I + + + G + +P
Sbjct: 95 VENEYGSINHTYHLDVV---ERSRHRPILQAGLPANASTVVGGDVEFVCKVYSDAQPHIQ 151
Query: 1170 WT----VNGDEVSPDGRIKFETSENQTIYRNKSAK------RATDSGSYTIQLVNTVGSD 1219
W NG + PDG + ++ I + + D+G Y ++ N +G
Sbjct: 152 WIKHVEKNGSKYGPDGLPYLKVLKHSGINSSNAEVLALFNVTEADAGEYICKVSNYIGQA 211
Query: 1220 SASCKVYVVDKPSPPQGP 1237
+ S + V+ K P
Sbjct: 212 NQSAWLTVLPKQQAPGRE 229
Score = 53.0 bits (127), Expect = 3e-07
Identities = 18/109 (16%), Positives = 31/109 (28%), Gaps = 7/109 (6%)
Query: 1400 NSSNSEPGKQSGPVIVEEQPNKPVMDLSGVRDITVKAGEDFSIHVPFMAFPQPAAFWFAN 1459
+ + + P + + R V A P P P W N
Sbjct: 4 DFVSENSNNKRAPYWTNTEKMEK-------RLHAVPAANTVKFRCPAGGNPMPTMRWLKN 56
Query: 1460 DSIIDDSDTRVHKQLTMNSASLVVKNSQRSDGGQYRLQLKNPAGFDTAT 1508
++ SL++++ SD G Y ++N G T
Sbjct: 57 GKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYTCVVENEYGSINHT 105
Score = 48.4 bits (115), Expect = 9e-06
Identities = 17/105 (16%), Positives = 35/105 (33%), Gaps = 10/105 (9%)
Query: 1414 IVEEQPNKPVMDLSGVRDITVKAGEDFSIHVPFMAFPQPAAFWF----------ANDSII 1463
+VE ++P++ + + G D + QP W D +
Sbjct: 110 VVERSRHRPILQAGLPANASTVVGGDVEFVCKVYSDAQPHIQWIKHVEKNGSKYGPDGLP 169
Query: 1464 DDSDTRVHKQLTMNSASLVVKNSQRSDGGQYRLQLKNPAGFDTAT 1508
+ + N+ L + N +D G+Y ++ N G +
Sbjct: 170 YLKVLKHSGINSSNAEVLALFNVTEADAGEYICKVSNYIGQANQS 214
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera
phosphorylation, transmembrane, tyrosine-protein kinase,
glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB:
2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Length = 536
Score = 136 bits (342), Expect = 4e-33
Identities = 40/260 (15%), Positives = 64/260 (24%), Gaps = 18/260 (6%)
Query: 219 KNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPG 278
++ S FKF + + + G + P
Sbjct: 275 EDACQACSPGFFKFEASESPCLECPEHTLPSPEGATSCECEEGFFRAPQDPASMPCTRPP 334
Query: 279 PPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWIC-----------I 327
L + L W PP+ GG + Y V C
Sbjct: 335 SAPHYL-TAVGMGAKVELRWTPPQDSGGREDIVYSVTCEQCWPESGECGPCEASVRYSEP 393
Query: 328 STTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVT 387
T+ V L Y F V A N + S + P +
Sbjct: 394 PHGLTRTSVTVSDLEPHMNYTFTVEARNGVSGLVTSR---SFRTASVSINQTEPPKVRLE 450
Query: 388 QVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQ 447
+++SW P R+ Y + + G NV + + +L
Sbjct: 451 GRSTTSLSVSWSIPPPQQS-RVWKYEVTYRKKGDSNSY--NVRRTEGFSVTLDDLAPDTT 507
Query: 448 YEFRVYAQNEAGLSLPSSAS 467
Y +V A + G S
Sbjct: 508 YLVQVQALTQEGQGAGSKVH 527
Score = 136 bits (342), Expect = 4e-33
Identities = 40/260 (15%), Positives = 64/260 (24%), Gaps = 18/260 (6%)
Query: 1826 KNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPG 1885
++ S FKF + + + G + P
Sbjct: 275 EDACQACSPGFFKFEASESPCLECPEHTLPSPEGATSCECEEGFFRAPQDPASMPCTRPP 334
Query: 1886 PPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWIC-----------I 1934
L + L W PP+ GG + Y V C
Sbjct: 335 SAPHYL-TAVGMGAKVELRWTPPQDSGGREDIVYSVTCEQCWPESGECGPCEASVRYSEP 393
Query: 1935 STTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVT 1994
T+ V L Y F V A N + S + P +
Sbjct: 394 PHGLTRTSVTVSDLEPHMNYTFTVEARNGVSGLVTSR---SFRTASVSINQTEPPKVRLE 450
Query: 1995 QVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQ 2054
+++SW P R+ Y + + G NV + + +L
Sbjct: 451 GRSTTSLSVSWSIPPPQQS-RVWKYEVTYRKKGDSNSY--NVRRTEGFSVTLDDLAPDTT 507
Query: 2055 YEFRVYAQNEAGLSLPSSAS 2074
Y +V A + G S
Sbjct: 508 YLVQVQALTQEGQGAGSKVH 527
Score = 131 bits (330), Expect = 1e-31
Identities = 43/247 (17%), Positives = 69/247 (27%), Gaps = 49/247 (19%)
Query: 890 DEMVLIFEVLDRPHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKD------- 942
RP + G + L WTPP+D+GG E Y V +
Sbjct: 321 APQDPASMPCTRPPSAPHYLTAVGMGAKVELRWTPPQDSGGREDIVYSVTCEQCWPESGE 380
Query: 943 ----YNSTVWTKVSSYVTTPFVRVRNLAIGSTYEFRVMAENQYGLSKPALTIDPIKAKHP 998
S +++ +T V V +L Y F V A N + +
Sbjct: 381 CGPCEASVRYSEPPHGLTRTSVTVSDLEPHMNYTFTVEARNGVSGLVTS---RSFRTASV 437
Query: 999 FDVPGAPGAPKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPD 1058
P + + S+S+ WS P + +Y V R D ++
Sbjct: 438 SINQTEPPKVRLEGRSTTSLSVSWSIPPPQQS-RVWKYEVTYRKKGDSNS--YNVRRTEG 494
Query: 1059 TSLKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGP 1118
S+ + L + Y +V A+ GQG
Sbjct: 495 FSV--------------------------------TLDDLAPDTTYLVQVQALTQEGQGA 522
Query: 1119 WSSSSDI 1125
S +
Sbjct: 523 GSKVHEF 529
Score = 112 bits (281), Expect = 2e-25
Identities = 40/301 (13%), Positives = 81/301 (26%), Gaps = 52/301 (17%)
Query: 1135 PKITSDLSIRDMTVLAGEEFTITVPFSG-----------RPKPTPIWTVNGDEVSPDGRI 1183
P++ L+ T+ AG + +G +P V+G+ + P G+
Sbjct: 207 PELLQGLAHFPETI-AGSDAPSLATVAGTCVDHAVVPPGGEEPRMHCAVDGEWLVPIGQC 265
Query: 1184 K--------------------FETSENQTIYRNKSAKRATDSGSYTIQLVNTVGSDSASC 1223
+ + G+ + +
Sbjct: 266 LCQAGYEKVEDACQACSPGFFKFEASESPCLECPEHTLPSPEGATSCECEEGFFRAPQDP 325
Query: 1224 KVYVVDKPSPPQGPLDVSDITPESCSLSWKPPLDDGGSPITNYVVEKYE----------- 1272
+P L + L W PP D GG Y V +
Sbjct: 326 ASMPCTRPPSAPHYL-TAVGMGAKVELRWTPPQDSGGREDIVYSVTCEQCWPESGECGPC 384
Query: 1273 SATGFWSKLSSFVRSPAYDVFGLETNRQYRFRVRAENQYGVSEPLELDNSITAKFPFTVP 1332
A+ +S+ + + V LE + Y F V A N + +
Sbjct: 385 EASVRYSEPPHGLTRTSVTVSDLEPHMNYTFTVEARNGVSGLVTSRSFRTAS---VSINQ 441
Query: 1333 DPPGQPQIVDWDTNNATLMWDRPRTDGGSKIQGYKMLLKTPTGELPTTIWSKIRPTSSTV 1392
P + ++ T + ++ W P ++ Y++ + + + +R T
Sbjct: 442 TEPPKVRLEGRSTTSLSVSWSIPPPQQS-RVWKYEVTYR----KKGDSNSYNVRRTEGFS 496
Query: 1393 Y 1393
Sbjct: 497 V 497
Score = 86.4 bits (213), Expect = 3e-17
Identities = 24/121 (19%), Positives = 41/121 (33%), Gaps = 4/121 (3%)
Query: 647 YRVVAENDLGMDSAIVKIQ---ISDRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITN 703
+ V A N + + +S P +E SL++ W P +
Sbjct: 415 FTVEARNGVSGLVTSRSFRTASVSINQTEPPKVRLEGRSTTSLSVSWSIPPPQQS-RVWK 473
Query: 704 YIVEKREHPMSSWIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTK 763
Y V R+ S+ V T ++ + L+P Y +V A G+ S + T
Sbjct: 474 YEVTYRKKGDSNSYNVRRTEGFSVTLDDLAPDTTYLVQVQALTQEGQGAGSKVHEFQTLS 533
Query: 764 D 764
Sbjct: 534 P 534
Score = 77.9 bits (191), Expect = 2e-14
Identities = 27/164 (16%), Positives = 36/164 (21%), Gaps = 12/164 (7%)
Query: 610 WYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQISDR 669
D S G F E SE + E R
Sbjct: 273 KVEDACQACSPGFFKFEASESPCLECPEHTLPSPEGATSCECEEGFFRAPQDPASMPCTR 332
Query: 670 PDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSW------------I 717
P + L W P GG Y V + S
Sbjct: 333 PPSAPHYLTAVGMGAKVELRWTPPQDSGGREDIVYSVTCEQCWPESGECGPCEASVRYSE 392
Query: 718 RVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLIT 761
T++ ++ L P Y F V A N S + +
Sbjct: 393 PPHGLTRTSVTVSDLEPHMNYTFTVEARNGVSGLVTSRSFRTAS 436
Score = 77.9 bits (191), Expect = 2e-14
Identities = 19/114 (16%), Positives = 31/114 (27%), Gaps = 6/114 (5%)
Query: 1207 SYTIQL--VNTVGSDSASCKVYVVDKPSPPQGPLD--VSDITPESCSLSWKPPLDDGGSP 1262
+YT + N V S P + + S S+SW P
Sbjct: 412 NYTFTVEARNGVSGLVTSRSFRTASVSINQTEPPKVRLEGRSTTSLSVSWSIPPPQQS-R 470
Query: 1263 ITNYVVEKYESATGFWSKLSSFVRSPAYDVFGLETNRQYRFRVRAENQYGVSEP 1316
+ Y V + + + L + Y +V+A Q G
Sbjct: 471 VWKYEVTYRKKGDSNSYN-VRRTEGFSVTLDDLAPDTTYLVQVQALTQEGQGAG 523
Score = 71.0 bits (173), Expect = 3e-12
Identities = 17/121 (14%), Positives = 34/121 (28%), Gaps = 10/121 (8%)
Query: 376 DKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVN------- 428
+P + G V L W P D GG Y + + ++ +
Sbjct: 331 TRPPSAPHYLTAVGMGAKVELRWTPPQDSGGREDIVYSVTCEQCWPESGECGPCEASVRY 390
Query: 429 ---VAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIV 485
+ + + +L Y F V A+N + S + + + +
Sbjct: 391 SEPPHGLTRTSVTVSDLEPHMNYTFTVEARNGVSGLVTSRSFRTASVSINQTEPPKVRLE 450
Query: 486 P 486
Sbjct: 451 G 451
Score = 71.0 bits (173), Expect = 3e-12
Identities = 17/121 (14%), Positives = 34/121 (28%), Gaps = 10/121 (8%)
Query: 1983 DKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVN------- 2035
+P + G V L W P D GG Y + + ++ +
Sbjct: 331 TRPPSAPHYLTAVGMGAKVELRWTPPQDSGGREDIVYSVTCEQCWPESGECGPCEASVRY 390
Query: 2036 ---VAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIV 2092
+ + + +L Y F V A+N + S + + + +
Sbjct: 391 SEPPHGLTRTSVTVSDLEPHMNYTFTVEARNGVSGLVTSRSFRTASVSINQTEPPKVRLE 450
Query: 2093 P 2093
Sbjct: 451 G 451
Score = 64.8 bits (157), Expect = 2e-10
Identities = 23/158 (14%), Positives = 35/158 (22%), Gaps = 22/158 (13%)
Query: 991 DPIKAKHPFDVPGAPGAPKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIK 1050
A P P + + L W+ P+ GG Y V +
Sbjct: 322 PQDPASMPCTRPPSAPHYLTAVGMGAKVELRWTPPQDSGGREDIVYSVTCEQCWPESG-- 379
Query: 1051 ASMAHIPDTSLKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCA 1110
+ + SE + T V+ L + Y F V A
Sbjct: 380 ------ECGPCEASVRYSEPPHGLTRTSVT--------------VSDLEPHMNYTFTVEA 419
Query: 1111 VNAAGQGPWSSSSDIIMCCAPPCAPKITSDLSIRDMTV 1148
N S S P ++
Sbjct: 420 RNGVSGLVTSRSFRTASVSINQTEPPKVRLEGRSTTSL 457
Score = 54.0 bits (129), Expect = 4e-07
Identities = 17/120 (14%), Positives = 30/120 (25%), Gaps = 35/120 (29%)
Query: 1562 TEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEGKSI 1621
+ L W+ P+ GG Y V +
Sbjct: 345 MGAKVELRWTPPQDSGGREDIVYSVTCEQCWPESGE------------------------ 380
Query: 1622 GSERGSTAQFLEREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPS 1681
++ ++ E G S +V +L +Y F + A N + S
Sbjct: 381 CGPCEASVRYSEPPHGLT-----------RTSVTVSDLEPHMNYTFTVEARNGVSGLVTS 429
Score = 47.1 bits (111), Expect = 6e-05
Identities = 16/133 (12%), Positives = 31/133 (23%), Gaps = 51/133 (38%)
Query: 1557 KGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVS 1616
+ + S+S+ WS P + +Y V R D ++
Sbjct: 448 RLEGRSTTSLSVSWSIPPPQQS-RVWKYEVTYRKKGDSNS--YNVRRTEGF--------- 495
Query: 1617 EGKSIGSERGSTAQFLEREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIG 1676
S ++ +L Y ++ A+ G
Sbjct: 496 ------------------------------------SVTLDDLAPDTTYLVQVQALTQEG 519
Query: 1677 ---KSEPSICTTP 1686
S+ T
Sbjct: 520 QGAGSKVHEFQTL 532
Score = 42.5 bits (99), Expect = 0.001
Identities = 11/70 (15%), Positives = 20/70 (28%)
Query: 5 GNTTIRFYYCEIIVDDCYIIERREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIA 64
G Y E ++ + + S +V +L +Y F + A
Sbjct: 360 GGREDIVYSVTCEQCWPESGECGPCEASVRYSEPPHGLTRTSVTVSDLEPHMNYTFTVEA 419
Query: 65 VNAIGKSEPS 74
N + S
Sbjct: 420 RNGVSGLVTS 429
Score = 39.4 bits (91), Expect = 0.014
Identities = 11/61 (18%), Positives = 21/61 (34%), Gaps = 5/61 (8%)
Query: 22 YIIERREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIG---KSEPSICTT 78
Y + R+ G + N S ++ +L Y ++ A+ G S+ T
Sbjct: 474 YEVTYRKKGDSNSY--NVRRTEGFSVTLDDLAPDTTYLVQVQALTQEGQGAGSKVHEFQT 531
Query: 79 P 79
Sbjct: 532 L 532
Score = 35.9 bits (82), Expect = 0.17
Identities = 16/89 (17%), Positives = 26/89 (29%), Gaps = 2/89 (2%)
Query: 1323 ITAKFPFTVPDPPGQPQIVDWDTNNATLMWDRPRTDGGSKIQGYKMLLKTPTGELPTTIW 1382
A P T P L W P+ GG + Y + + E
Sbjct: 324 DPASMPCTRPPSAPHYLTAVGMGAKVELRWTPPQDSGGREDIVYSVTCEQCWPESGECGP 383
Query: 1383 SK--IRPTSSTVYCKDTTMNSSNSEPGKQ 1409
+ +R + T++ S+ EP
Sbjct: 384 CEASVRYSEPPHGLTRTSVTVSDLEPHMN 412
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET:
AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Length = 361
Score = 132 bits (334), Expect = 4e-33
Identities = 38/91 (41%), Positives = 55/91 (60%), Gaps = 6/91 (6%)
Query: 813 IKTSSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVS------HNLEKELIRK 866
K V D YDI EE+G+G F +V +CRE+ TG +AAKFI + +E I +
Sbjct: 5 FKQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIER 64
Query: 867 EIDIMNQLHHPKLINLHDAFEDDDEMVLIFE 897
E+ I+ Q+ HP +I LHD +E+ ++VLI E
Sbjct: 65 EVSILRQVLHPNIITLHDVYENRTDVVLILE 95
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit;
HET: MES; 2.60A {Homo sapiens}
Length = 326
Score = 130 bits (330), Expect = 5e-33
Identities = 34/91 (37%), Positives = 56/91 (61%), Gaps = 6/91 (6%)
Query: 813 IKTSSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVS------HNLEKELIRK 866
+ +V D+YD EE+G+G F VV +CRE+ TG +AAKFI + +E I +
Sbjct: 4 FRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER 63
Query: 867 EIDIMNQLHHPKLINLHDAFEDDDEMVLIFE 897
E+ I+ ++ HP +I LH+ +E+ +++LI E
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILE 94
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-
like; 2.50A {Homo sapiens}
Length = 312
Score = 130 bits (327), Expect = 7e-33
Identities = 40/250 (16%), Positives = 85/250 (34%), Gaps = 23/250 (9%)
Query: 88 GEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFR 147
G P + ++ L +C+ TP + W ++ R VE+ G +
Sbjct: 1 GIDPFTKEVVVNVDDDGVISLNFECDK-MTPKSEFSWSKDYVSTEDSPRLEVESKGNKTK 59
Query: 148 LHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVK------------IGTPPRIDRMPNALYI 195
+ F ++ D G Y+C+ ++ G A + + P + A+ I
Sbjct: 60 MTFKDLGMDDLGIYSCDVTDTDGIASSYLIDEEELKRLLALSHEHKFPTVPVKSELAVEI 119
Query: 196 PEGDNTKVKIFYAGDQPM-EVSLTKNGRVVQSDDRFKFTVLDD--YIIIFIKEIRKEDAG 252
E + + +V+ N + + ++K + + I +F+++++ ED G
Sbjct: 120 LEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEG 179
Query: 253 DYTVNLSNSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHY 312
YT L + + T L G L + + P + L
Sbjct: 180 TYTFQLQDGKATNHSTVV-----LVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYLSWE-- 232
Query: 313 VVERRDISMP 322
V ++ +
Sbjct: 233 VTGECNVLLK 242
Score = 130 bits (327), Expect = 7e-33
Identities = 40/250 (16%), Positives = 85/250 (34%), Gaps = 23/250 (9%)
Query: 1695 GEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFR 1754
G P + ++ L +C+ TP + W ++ R VE+ G +
Sbjct: 1 GIDPFTKEVVVNVDDDGVISLNFECDK-MTPKSEFSWSKDYVSTEDSPRLEVESKGNKTK 59
Query: 1755 LHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVK------------IGTPPRIDRMPNALYI 1802
+ F ++ D G Y+C+ ++ G A + + P + A+ I
Sbjct: 60 MTFKDLGMDDLGIYSCDVTDTDGIASSYLIDEEELKRLLALSHEHKFPTVPVKSELAVEI 119
Query: 1803 PEGDNTKVKIFYAGDQPM-EVSLTKNGRVVQSDDRFKFTVLDD--YIIIFIKEIRKEDAG 1859
E + + +V+ N + + ++K + + I +F+++++ ED G
Sbjct: 120 LEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEG 179
Query: 1860 DYTVNLSNSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHY 1919
YT L + + T L G L + + P + L
Sbjct: 180 TYTFQLQDGKATNHSTVV-----LVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYLSWE-- 232
Query: 1920 VVERRDISMP 1929
V ++ +
Sbjct: 233 VTGECNVLLK 242
Score = 125 bits (315), Expect = 3e-31
Identities = 31/239 (12%), Positives = 69/239 (28%), Gaps = 25/239 (10%)
Query: 449 EFRVYAQNEAG-----LSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCT 503
+ + G L + + + L + +
Sbjct: 72 IYSCDVTDTDGIASSYLIDEEELKRLLALSHEHKFPTVPVKSELAVEILEKGQVRFWMQA 131
Query: 504 ITGCPKPTISWLKGSREITPSARHHIFAEGDT--YTLIINSVYGVDADEYVCRAVNKGGV 561
++++ +EI ++ + + +T + + + D Y + +
Sbjct: 132 EKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQDGKAT 191
Query: 562 KSTKAELIIMTAPKFNVPPRFRDTAYFDK---------------GENVVVKIPFTGYPKP 606
+ L+ K F+ + K NV++K K
Sbjct: 192 NHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYLSWEVTGECNVLLKCKVANIKKE 251
Query: 607 -KITWYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKI 664
I WY+D I + + L I + S D Y V+ ++D G D + +K+
Sbjct: 252 THIVWYKDEREISVDEKHDFK--DGICTLLITEFSKKDAGIYEVILKDDRGKDKSRLKL 308
Score = 125 bits (314), Expect = 4e-31
Identities = 26/215 (12%), Positives = 61/215 (28%), Gaps = 13/215 (6%)
Query: 478 AKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYT 537
P + N + + F+C PK SW K S R + ++G+
Sbjct: 1 GIDPFTKEVVVNVDDDGVISLNFECDK-MTPKSEFSWSKDYVSTEDSPRLEVESKGNKTK 59
Query: 538 LIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPRFRDTAYF--------- 588
+ + D Y C + G+ S+ + +
Sbjct: 60 MTFKDLGMDDLGIYSCDVTDTDGIASSYLIDEEELKRLLALSHEHKFPTVPVKSELAVEI 119
Query: 589 -DKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHF--HVETSERHAILTIRDASNVDTA 645
+KG+ K+ + + + I G + H++ + + + + D
Sbjct: 120 LEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEG 179
Query: 646 PYRVVAENDLGMDSAIVKIQISDRPDPPQFPTVED 680
Y ++ + + V + + +
Sbjct: 180 TYTFQLQDGKATNHSTVVLVGDVFKKLQKEAEFQR 214
Score = 117 bits (294), Expect = 2e-28
Identities = 45/307 (14%), Positives = 92/307 (29%), Gaps = 48/307 (15%)
Query: 1619 KSIGSERGSTAQFLEREVGGA----IWLKCNDYNVLECSFSVLNLVEGNDYEFRI----- 1669
++ + + F E + W K DY E S + +GN +
Sbjct: 11 VNVDDDGVISLNF-ECDKMTPKSEFSWSK--DYVSTEDSPRLEVESKGNKTKMTFKDLGM 67
Query: 1670 --------IAVNAIGKSEPSICTTPVKICEFVGGEKPDFIV-----PLKDLVVPLGKLLT 1716
+ G + + + F L ++ G++
Sbjct: 68 DDLGIYSCDVTDTDGIASSYLIDEEELKRLLALSHEHKFPTVPVKSELAVEILEKGQVRF 127
Query: 1717 LQCEATGTPVPKCRWLRNGREISSGARYRV--ETAGGVFRLHFNEVTDVDNGDYTCEAYN 1774
+ K ++ N +EI G +Y++ + G+ + ++ D D G YT + +
Sbjct: 128 WMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQD 187
Query: 1775 SVGFAHTSSRVKIGTPPRIDRMPNALYIP------------------EGDNTKVKIFYAG 1816
H++ + ++ + N +K A
Sbjct: 188 GKATNHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYLSWEVTGECNVLLKCKVAN 247
Query: 1817 DQPM-EVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGT 1875
+ + K+ R + D++ F D + I E K+DAG Y V L + G
Sbjct: 248 IKKETHIVWYKDEREISVDEKHDFK--DGICTLLITEFSKKDAGIYEVILKDDRGKDKSR 305
Query: 1876 FTINITG 1882
+
Sbjct: 306 LKLVDEA 312
Score = 117 bits (293), Expect = 2e-28
Identities = 35/243 (14%), Positives = 75/243 (30%), Gaps = 28/243 (11%)
Query: 59 EFRIIAVNAIGKSEPSICTTPVKICEFVGGEKPDFIV-----PLKDLVVPLGKLLTLQCE 113
+ + G + + + F L ++ G++
Sbjct: 72 IYSCDVTDTDGIASSYLIDEEELKRLLALSHEHKFPTVPVKSELAVEILEKGQVRFWMQA 131
Query: 114 ATGTPVPKCRWLRNGREISSGARYRV--ETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGF 171
+ K ++ N +EI G +Y++ + G+ + ++ D D G YT + +
Sbjct: 132 EKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQDGKAT 191
Query: 172 AHTSSRVKIGTPPRIDRMPNALYIP------------------EGDNTKVKIFYAGDQPM 213
H++ + ++ + N +K A +
Sbjct: 192 NHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYLSWEVTGECNVLLKCKVANIKKE 251
Query: 214 -EVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTIN 272
+ K+ R + D++ F D + I E K+DAG Y V L + G +
Sbjct: 252 THIVWYKDEREISVDEKHDFK--DGICTLLITEFSKKDAGIYEVILKDDRGKDKSRLKLV 309
Query: 273 ITG 275
Sbjct: 310 DEA 312
Score = 97.0 bits (241), Expect = 1e-21
Identities = 48/368 (13%), Positives = 98/368 (26%), Gaps = 82/368 (22%)
Query: 1430 RDITVKAGEDFSIHVPFMAFPQPAAFWFANDSIIDDSDTRVHKQLTMNSASLVVKNSQRS 1489
++ + M P+ W + +DS R+ + N + K+
Sbjct: 11 VNVDDDGVISLNFECDKM-TPKSEFSWSKDYVSTEDSP-RLEVESKGNKTKMTFKDLGMD 68
Query: 1490 DGGQYRLQLKNPAGFDTATLHSRLRTLPDSVNPRCHLPSSTSKERPKFPTHPNHQPWLKW 1549
D G Y + + G A+ + + KFPT P
Sbjct: 69 DLGIYSCDVTDTDG--IASSYLIDEEELKRL--------LALSHEHKFPTVPVKSEL--- 115
Query: 1550 ARASLTSKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSL 1609
V+ E W + G+
Sbjct: 116 --------AVEILEKGQVRFWMQAEKLSGNAK---------------------------- 139
Query: 1610 KYVLWVSEGKSIGSERGSTAQFLEREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRI 1669
V ++ K I G + G I + + L + ++ +
Sbjct: 140 --VNYIFNEKEI--FEGPKYKMHIDRNTGIIEMF------------MEKLQDEDEGTYTF 183
Query: 1670 IAVNAIGKSEPSI-----------CTTPVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQ 1718
+ + ++ + E++ + P F+ L V + L+
Sbjct: 184 QLQDGKATNHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYLSWEVTG-ECNVLLK 242
Query: 1719 CEATGTPVP-KCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVG 1777
C+ W ++ REIS ++ + G+ L E + D G Y + G
Sbjct: 243 CKVANIKKETHIVWYKDEREISVDEKHDFK--DGICTLLITEFSKKDAGIYEVILKDDRG 300
Query: 1778 FAHTSSRV 1785
+ ++
Sbjct: 301 KDKSRLKL 308
Score = 85.4 bits (211), Expect = 1e-17
Identities = 24/144 (16%), Positives = 47/144 (32%), Gaps = 15/144 (10%)
Query: 439 IPNLIEGRQYEFRVYAQNEAG-----------LSLPSSASNSVQIKDPMAAKAPEIIVPL 487
+ L + + + Q+ + Q ++ + + P + L
Sbjct: 170 MEKLQDEDEGTYTFQLQDGKATNHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYL 229
Query: 488 RNANAIQNHNAQFQCTITGCPKPT-ISWLKGSREITPSARHHIFAEGDTYTLIINSVYGV 546
+ N +C + K T I W K REI+ +H + TL+I
Sbjct: 230 -SWEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDEKHDF--KDGICTLLITEFSKK 286
Query: 547 DADEYVCRAVNKGGVKSTKAELII 570
DA Y + G ++ +L+
Sbjct: 287 DAGIYEVILKDDRGKDKSRLKLVD 310
Score = 85.4 bits (211), Expect = 1e-17
Identities = 24/144 (16%), Positives = 47/144 (32%), Gaps = 15/144 (10%)
Query: 2046 IPNLIEGRQYEFRVYAQNEAG-----------LSLPSSASNSVQIKDPMAAKAPEIIVPL 2094
+ L + + + Q+ + Q ++ + + P + L
Sbjct: 170 MEKLQDEDEGTYTFQLQDGKATNHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYL 229
Query: 2095 RNANAIQNHNAQFQCTITGCPKPT-ISWLKGSREITPSARHHIFAEGDTYTLIINSVYGV 2153
+ N +C + K T I W K REI+ +H + TL+I
Sbjct: 230 -SWEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDEKHDF--KDGICTLLITEFSKK 286
Query: 2154 DADEYVCRAVNKGGVKSTKAELII 2177
DA Y + G ++ +L+
Sbjct: 287 DAGIYEVILKDDRGKDKSRLKLVD 310
Score = 78.1 bits (192), Expect = 3e-15
Identities = 18/121 (14%), Positives = 35/121 (28%), Gaps = 1/121 (0%)
Query: 2085 AKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYT 2144
P + N + + F+C PK SW K S R + ++G+
Sbjct: 1 GIDPFTKEVVVNVDDDGVISLNFECDK-MTPKSEFSWSKDYVSTEDSPRLEVESKGNKTK 59
Query: 2145 LIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPRFRDTAYFESDVVVVVC 2204
+ + D Y C + G+ S+ + + + V
Sbjct: 60 MTFKDLGMDDLGIYSCDVTDTDGIASSYLIDEEELKRLLALSHEHKFPTVPVKSELAVEI 119
Query: 2205 V 2205
+
Sbjct: 120 L 120
Score = 73.5 bits (180), Expect = 1e-13
Identities = 11/143 (7%), Positives = 36/143 (25%), Gaps = 7/143 (4%)
Query: 2056 EFRVYAQNEAG-----LSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCT 2110
+ + G L + + + L + +
Sbjct: 72 IYSCDVTDTDGIASSYLIDEEELKRLLALSHEHKFPTVPVKSELAVEILEKGQVRFWMQA 131
Query: 2111 ITGCPKPTISWLKGSREITPSARHHIFAEGDT--YTLIINSVYGVDADEYVCRAVNKGGV 2168
++++ +EI ++ + + +T + + + D Y + +
Sbjct: 132 EKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQDGKAT 191
Query: 2169 KSTKAELIIMTAPKFNVPPRFRD 2191
+ L+ K F+
Sbjct: 192 NHSTVVLVGDVFKKLQKEAEFQR 214
Score = 64.6 bits (157), Expect = 8e-11
Identities = 24/179 (13%), Positives = 47/179 (26%), Gaps = 23/179 (12%)
Query: 1064 VLWVSEGKSIGSERGSTAQFLE---LLLMFIPNRVTSLIENHEYEFRVCAVNAAG----- 1115
V ++ K I ++ MF+ L + E + +
Sbjct: 140 VNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEK----LQDEDEGTYTFQLQDGKATNHST 195
Query: 1116 -----QGPWSSSSDIIMCCAPPCAPKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPI- 1169
+ + + V + + K T I
Sbjct: 196 VVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYLSWEVTGECNVLLKCKVANIKKETHIV 255
Query: 1170 WTVNGDEVSPDGRIKFETSENQ-TIYRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYV 1227
W + E+S D + F+ I + D+G Y + L + G D + K+
Sbjct: 256 WYKDEREISVDEKHDFKDGICTLLI---TEFSKK-DAGIYEVILKDDRGKDKSRLKLVD 310
Score = 56.9 bits (137), Expect = 3e-08
Identities = 18/164 (10%), Positives = 42/164 (25%), Gaps = 14/164 (8%)
Query: 1105 EFRVCAVNAAGQGPWSSSSDIIMCCAPPCAPKITSDLSI--------RDMTVLAGEEFTI 1156
+ + G +SS +I ++ + + +L +
Sbjct: 72 IYSCDVTDTDGI----ASSYLIDEEELKRLLALSHEHKFPTVPVKSELAVEILEKGQVRF 127
Query: 1157 TV-PFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQTIYRNKSAK-RATDSGSYTIQLVN 1214
+ + N E+ + K N I K + D G+YT QL +
Sbjct: 128 WMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQD 187
Query: 1215 TVGSDSASCKVYVVDKPSPPQGPLDVSDITPESCSLSWKPPLDD 1258
++ ++ + + + L
Sbjct: 188 GKATNHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYLSW 231
Score = 49.6 bits (118), Expect = 6e-06
Identities = 20/148 (13%), Positives = 39/148 (26%), Gaps = 7/148 (4%)
Query: 1134 APKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQTI 1193
P + ++ PK W+ + R++ E+ N+T
Sbjct: 3 DPFTKEVVV--NVDDDGVISLNFECDK-MTPKSEFSWSKDYVSTEDSPRLEVESKGNKTK 59
Query: 1194 YRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYVVDKPSPPQGPLDVSDITPESCSLSWK 1253
K D G Y+ + +T G AS + ++
Sbjct: 60 MTFKDL-GMDDLGIYSCDVTDTDG--IASSYLIDEEELKRLLALSHEHKFPTVPVKSELA 116
Query: 1254 PPLDDGGSPITNYVVEK-YESATGFWSK 1280
+ + G EK +A +
Sbjct: 117 VEILEKGQVRFWMQAEKLSGNAKVNYIF 144
Score = 49.2 bits (117), Expect = 8e-06
Identities = 16/153 (10%), Positives = 44/153 (28%), Gaps = 3/153 (1%)
Query: 1395 KDTTMNSSNSEPGKQSGPVIVEEQPNKPVMDLSGVRDITVKAGEDFSIHV-PFMAFPQPA 1453
D +S + + + + + P + + + + +
Sbjct: 80 TDGIASSYLIDEEELKRLLALSHEHKFPTVPVKSELAVEILEKGQVRFWMQAEKLSGNAK 139
Query: 1454 AFWFANDSIIDDSD-TRVHKQLTMNSASLVVKNSQRSDGGQYRLQLKNPAGFDTATLHSR 1512
+ N+ I + ++H + ++ Q D G Y QL++ + +T+
Sbjct: 140 VNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQDGKATNHSTVVLV 199
Query: 1513 LRTLPD-SVNPRCHLPSSTSKERPKFPTHPNHQ 1544
K+ P F + + +
Sbjct: 200 GDVFKKLQKEAEFQRQEWIRKQGPHFVEYLSWE 232
>1x3d_A Fibronectin type-III domain containing protein 3A; structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
b.1.2.1
Length = 118
Score = 123 bits (310), Expect = 7e-33
Identities = 34/109 (31%), Positives = 49/109 (44%), Gaps = 2/109 (1%)
Query: 656 GMDSAIVKIQISDRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSS 715
G A + +S PD P P + + +SL L W+AP D GS I N+++E E +
Sbjct: 4 GSSGAEIFTTLSCEPDIPNPPRIANRTKNSLTLQWKAPS-DNGSKIQNFVLEWDEGKGNG 62
Query: 716 -WIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTK 763
+ + IT LSP +FR+ A N YG S S T+
Sbjct: 63 EFCQCYMGSQKQFKITKLSPAMGCKFRLSARNDYGTSGFSEEVLYYTSG 111
Score = 112 bits (282), Expect = 5e-29
Identities = 31/120 (25%), Positives = 44/120 (36%), Gaps = 7/120 (5%)
Query: 1217 GSDSASCKVYVVDKPSPPQGPLDVSDITPESCSLSWKPPLDDGGSPITNYVVEKYESATG 1276
GS A + +P P P +++ T S +L WK P D GS I N+V+E E
Sbjct: 4 GSSGAEIFTTLSCEPDIPNPPR-IANRTKNSLTLQWKAP-SDNGSKIQNFVLEWDEGKGN 61
Query: 1277 FWSKLSSFVRSPAYDVFGLETNRQYRFRVRAENQYGVSEPLELDNSITAKFPFTVPDPPG 1336
+ + L +FR+ A N YG S E T+ P
Sbjct: 62 GEFCQCYMGSQKQFKITKLSPAMGCKFRLSARNDYGTSGFSEEVLYYTSG-----CSGPS 116
Score = 104 bits (262), Expect = 3e-26
Identities = 28/122 (22%), Positives = 45/122 (36%), Gaps = 7/122 (5%)
Query: 261 SSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDIS 320
SSGS ++ P P P ++ TK++ TL W P D G K+ ++V+E +
Sbjct: 2 SSGSSGAEIFTTLSCEPDIPNPPR-IANRTKNSLTLQWKAP-SDNGSKIQNFVLEWDEGK 59
Query: 321 MPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSP 380
C F + L+ F + A N+ G E + + S
Sbjct: 60 GNGEFCQCYMGSQKQFKITKLSPAMGCKFRLSARNDYGTSGFSEEVLYYTS-----GCSG 114
Query: 381 PG 382
P
Sbjct: 115 PS 116
Score = 104 bits (262), Expect = 3e-26
Identities = 28/122 (22%), Positives = 45/122 (36%), Gaps = 7/122 (5%)
Query: 1868 SSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDIS 1927
SSGS ++ P P P ++ TK++ TL W P D G K+ ++V+E +
Sbjct: 2 SSGSSGAEIFTTLSCEPDIPNPPR-IANRTKNSLTLQWKAP-SDNGSKIQNFVLEWDEGK 59
Query: 1928 MPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSP 1987
C F + L+ F + A N+ G E + + S
Sbjct: 60 GNGEFCQCYMGSQKQFKITKLSPAMGCKFRLSARNDYGTSGFSEEVLYYTS-----GCSG 114
Query: 1988 PG 1989
P
Sbjct: 115 PS 116
Score = 97.9 bits (244), Expect = 6e-24
Identities = 25/118 (21%), Positives = 42/118 (35%), Gaps = 6/118 (5%)
Query: 890 DEMVLIFEVLDRPHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWT 949
+ + P P +SLTL W P DNG S+I N+V+E +
Sbjct: 6 SGAEIFTTLSCEPDIPNPPRIANRTKNSLTLQWKAPSDNG-SKIQNFVLEWDEGKGNGEF 64
Query: 950 KVSSYVTTPFVRVRNLAIGSTYEFRVMAENQYGLSKPALTIDPIKAKHPFDVPGAPGA 1007
+ ++ L+ +FR+ A N YG S + + + P +
Sbjct: 65 CQCYMGSQKQFKITKLSPAMGCKFRLSARNDYGTSGFSEEVLYYTSG-----CSGPSS 117
Score = 96.7 bits (241), Expect = 2e-23
Identities = 24/110 (21%), Positives = 40/110 (36%), Gaps = 5/110 (4%)
Query: 358 GMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKH 417
G + +P P P + + + L W P D GS+IQ + ++
Sbjct: 1 GSSGSSG---AEIFTTLSCEPDIPNPPRIANRTKNSLTLQWKAP-SDNGSKIQNFVLEWD 56
Query: 418 EVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSAS 467
E G + + + Q I L +FR+ A+N+ G S S
Sbjct: 57 E-GKGNGEFCQCYMGSQKQFKITKLSPAMGCKFRLSARNDYGTSGFSEEV 105
Score = 96.7 bits (241), Expect = 2e-23
Identities = 24/110 (21%), Positives = 40/110 (36%), Gaps = 5/110 (4%)
Query: 1965 GMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKH 2024
G + +P P P + + + L W P D GS+IQ + ++
Sbjct: 1 GSSGSSG---AEIFTTLSCEPDIPNPPRIANRTKNSLTLQWKAP-SDNGSKIQNFVLEWD 56
Query: 2025 EVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSAS 2074
E G + + + Q I L +FR+ A+N+ G S S
Sbjct: 57 E-GKGNGEFCQCYMGSQKQFKITKLSPAMGCKFRLSARNDYGTSGFSEEV 105
Score = 92.1 bits (229), Expect = 7e-22
Identities = 25/145 (17%), Positives = 40/145 (27%), Gaps = 35/145 (24%)
Query: 991 DPIKAKHPFDVPGAPGAPKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIK 1050
P P P+ + T++S++L W P D GS IQ +++E
Sbjct: 7 GAEIFTTLSCEPDIPNPPRIANRTKNSLTLQWKAPS-DNGSKIQNFVLEWD-EGKGNGEF 64
Query: 1051 ASMAHIPDTSLKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCA 1110
K +T L +FR+ A
Sbjct: 65 CQCYMGSQKQFK--------------------------------ITKLSPAMGCKFRLSA 92
Query: 1111 VNAAGQGPWSSSSDIIMC-CAPPCA 1134
N G +S C+ P +
Sbjct: 93 RNDYGTSGFSEEVLYYTSGCSGPSS 117
Score = 71.7 bits (176), Expect = 9e-15
Identities = 22/130 (16%), Positives = 35/130 (26%), Gaps = 47/130 (36%)
Query: 1559 VDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEG 1618
+ T++S++L W P D GS IQ +++E +
Sbjct: 27 ANRTKNSLTLQWKAPS-DNGSKIQNFVLEWDEGKGN------------------------ 61
Query: 1619 KSIGSERGSTAQFLEREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKS 1678
C Y + F + L +FR+ A N G S
Sbjct: 62 ----------------------GEFCQCYMGSQKQFKITKLSPAMGCKFRLSARNDYGTS 99
Query: 1679 EPSICTTPVK 1688
S
Sbjct: 100 GFSEEVLYYT 109
Score = 64.7 bits (158), Expect = 3e-12
Identities = 14/60 (23%), Positives = 21/60 (35%), Gaps = 1/60 (1%)
Query: 22 YIIERREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPSICTTPVK 81
+++E E G C Y + F + L +FR+ A N G S S
Sbjct: 51 FVLEWDEGKGN-GEFCQCYMGSQKQFKITKLSPAMGCKFRLSARNDYGTSGFSEEVLYYT 109
Score = 51.2 bits (123), Expect = 1e-07
Identities = 21/82 (25%), Positives = 31/82 (37%), Gaps = 7/82 (8%)
Query: 1312 GVSEPLELDNSITAKFPFTVPDPPGQPQIVDWDTNNATLMWDRPRTDGGSKIQGYKMLLK 1371
G S + T PD P P+I + N+ TL W P +D GSKIQ + +
Sbjct: 1 GSSGSSGAEIFTT---LSCEPDIPNPPRIANRTKNSLTLQWKAP-SDNGSKIQNFVLEWD 56
Query: 1372 TPTGELPTTIWSKIRPTSSTVY 1393
G + + S +
Sbjct: 57 EGKG---NGEFCQCYMGSQKQF 75
>3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma,
epidermolysis bullosa, alternative splicing, disease
mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo
sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A
Length = 234
Score = 126 bits (319), Expect = 1e-32
Identities = 48/225 (21%), Positives = 76/225 (33%), Gaps = 15/225 (6%)
Query: 277 PGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHDTTF 336
G P P + +W PP G K Y V+ +
Sbjct: 6 LGAPQNP-NAKAAGSRKIHFNWLPPS---G-KPMGYRVKYWIQGDSESEAHLLDSKVPSV 60
Query: 337 IVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNL 396
+ L +Y V A G GP + ++ + PS PG V L
Sbjct: 61 ELTNLYPYCDYEMKVCAYGAQGEGPYSS---LVSCRTHQEVPSEPGRLAFNVVSSTVTQL 117
Query: 397 SWDKPLDDGGSRIQGYWIDKHEVGSD-----AWQRVNVAICAPSQINIPNLIEGRQYEFR 451
SW +P + G I Y + V D ++V V + I NL E + Y +
Sbjct: 118 SWAEPAETNG-EITAYEVCYGLVNDDNRPIGPMKKVLVDNPKNRMLLIENLRESQPYRYT 176
Query: 452 VYAQNEAGLSLPSSASNSVQIKDPMAAKAPEII-VPLRNANAIQN 495
V A+N AG A ++ + P I +P+ +A + ++
Sbjct: 177 VKARNGAGWGPEREAIINLATQPKRPMSIPIIPDIPIVDAQSGED 221
Score = 126 bits (319), Expect = 1e-32
Identities = 48/225 (21%), Positives = 76/225 (33%), Gaps = 15/225 (6%)
Query: 1884 PGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHDTTF 1943
G P P + +W PP G K Y V+ +
Sbjct: 6 LGAPQNP-NAKAAGSRKIHFNWLPPS---G-KPMGYRVKYWIQGDSESEAHLLDSKVPSV 60
Query: 1944 IVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNL 2003
+ L +Y V A G GP + ++ + PS PG V L
Sbjct: 61 ELTNLYPYCDYEMKVCAYGAQGEGPYSS---LVSCRTHQEVPSEPGRLAFNVVSSTVTQL 117
Query: 2004 SWDKPLDDGGSRIQGYWIDKHEVGSD-----AWQRVNVAICAPSQINIPNLIEGRQYEFR 2058
SW +P + G I Y + V D ++V V + I NL E + Y +
Sbjct: 118 SWAEPAETNG-EITAYEVCYGLVNDDNRPIGPMKKVLVDNPKNRMLLIENLRESQPYRYT 176
Query: 2059 VYAQNEAGLSLPSSASNSVQIKDPMAAKAPEII-VPLRNANAIQN 2102
V A+N AG A ++ + P I +P+ +A + ++
Sbjct: 177 VKARNGAGWGPEREAIINLATQPKRPMSIPIIPDIPIVDAQSGED 221
Score = 126 bits (318), Expect = 2e-32
Identities = 52/261 (19%), Positives = 81/261 (31%), Gaps = 38/261 (14%)
Query: 902 PHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTKVSSYVTTPFVR 961
P+N +A + W PP +G + Y V+ + P V
Sbjct: 6 LGAPQNPNAKAAGSRKIHFNWLPP--SG--KPMGYRVKYWIQGDSESEAHLLDSKVPSVE 61
Query: 962 VRNLAIGSTYEFRVMAENQYGLSKPALTIDPIKAKHPFDVPGAPGAPKGVDSTEDSISLV 1021
+ NL YE +V A G + + + +VP PG + L
Sbjct: 62 LTNLYPYCDYEMKVCAYGAQGEGPYS---SLVSCRTHQEVPSEPGRLAFNVVSSTVTQLS 118
Query: 1022 WSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEGKSIGSERGSTA 1081
W++P G I Y V L++DD R
Sbjct: 119 WAEPAETNG-EITAYEVCYGLVNDDNRPIGP-------------MKKVLVDNPKNRMLL- 163
Query: 1082 QFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPWSSSSDIIMCCAPPCAP-KITSD 1140
+ +L E+ Y + V A N AG GP + II P P I
Sbjct: 164 -------------IENLRESQPYRYTVKARNGAGWGPEREA--IINLATQPKRPMSIPII 208
Query: 1141 LSIRDMTVLAGEEFTITVPFS 1161
I + +GE++ + +S
Sbjct: 209 PDIPIVDAQSGEDYDSFLMYS 229
Score = 86.0 bits (213), Expect = 2e-18
Identities = 34/231 (14%), Positives = 70/231 (30%), Gaps = 25/231 (10%)
Query: 1231 PSPPQGPLDVSDITPESCSLSWKPPLDDGGSPITNYVVEKYESATGFWSKLSSFVRSPAY 1290
PQ P + +W PP Y V+ + + P+
Sbjct: 6 LGAPQNP-NAKAAGSRKIHFNWLPP----SGKPMGYRVKYWIQGDSESEAHLLDSKVPSV 60
Query: 1291 DVFGLETNRQYRFRVRAENQYGVSEPLELDNSITAKFPFTVPDPPGQPQIVDWDTNNATL 1350
++ L Y +V A G ++ + VP PG+ + L
Sbjct: 61 ELTNLYPYCDYEMKVCAYGAQGEGPYSS---LVSCRTHQEVPSEPGRLAFNVVSSTVTQL 117
Query: 1351 MWDRPRTDGGSKIQGYK---MLLKTPTGELPTTIWSKIRPTSSTVY-----CKDTT---- 1398
W P G +I Y+ L+ + + + + +
Sbjct: 118 SWAEPAETNG-EITAYEVCYGLVNDDNRPIGPMKKVLVDNPKNRMLLIENLRESQPYRYT 176
Query: 1399 MNSSNSE-PGKQSGPVI-VEEQPNKPVM--DLSGVRDITVKAGEDFSIHVP 1445
+ + N G + +I + QP +P+ + + + ++GED+ +
Sbjct: 177 VKARNGAGWGPEREAIINLATQPKRPMSIPIIPDIPIVDAQSGEDYDSFLM 227
Score = 75.6 bits (186), Expect = 6e-15
Identities = 32/179 (17%), Positives = 54/179 (30%), Gaps = 28/179 (15%)
Query: 600 FTGYPKPKITWYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAPY-----RVVAEND 654
GY ++ ++ + +++ LT + PY +V A
Sbjct: 33 PMGY---RVKYWIQGD--SESEAHLLDSKVPSVELT-------NLYPYCDYEMKVCAYGA 80
Query: 655 LGM--DSAIVKIQ-ISDRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREH 711
G S++V + + P P + L W P G IT Y V
Sbjct: 81 QGEGPYSSLVSCRTHQEVPSEPGRLAFNVVSSTVTQLSWAEPAETNG-EITAYEVCYGLV 139
Query: 712 -----PMSSWIRVG--NTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTK 763
P+ +V N + + I L Y + V A N G + T+
Sbjct: 140 NDDNRPIGPMKKVLVDNPKNRMLLIENLRESQPYRYTVKARNGAGWGPEREAIINLATQ 198
Score = 71.7 bits (176), Expect = 1e-13
Identities = 30/136 (22%), Positives = 45/136 (33%), Gaps = 11/136 (8%)
Query: 900 DRPHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVV------EKKDYNSTVWTKVSS 953
+ P P L + + L W P + G EIT Y V + + +
Sbjct: 97 EVPSEPGRLAFNVVSSTVTQLSWAEPAETNG-EITAYEVCYGLVNDDNRPIGPMKKVLVD 155
Query: 954 YVTTPFVRVRNLAIGSTYEFRVMAENQYGLSKPALTIDPIKAKH--PFDVPGAPGAPK-G 1010
+ + NL Y + V A N G I + + P +P P P
Sbjct: 156 NPKNRMLLIENLRESQPYRYTVKARNGAGWGPEREAIINLATQPKRPMSIPIIPDIPIVD 215
Query: 1011 VDSTEDSIS-LVWSKP 1025
S ED S L++S
Sbjct: 216 AQSGEDYDSFLMYSDD 231
Score = 66.0 bits (161), Expect = 1e-11
Identities = 19/96 (19%), Positives = 33/96 (34%), Gaps = 5/96 (5%)
Query: 670 PDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSW-IRVGNTRFTTMA 728
PQ P + G + W P Y V+ S + +++ ++
Sbjct: 6 LGAPQNPNAKAAGSRKIHFNWLPP----SGKPMGYRVKYWIQGDSESEAHLLDSKVPSVE 61
Query: 729 ITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKD 764
+T L P YE +V A G S+ T ++
Sbjct: 62 LTNLYPYCDYEMKVCAYGAQGEGPYSSLVSCRTHQE 97
Score = 61.7 bits (150), Expect = 3e-10
Identities = 41/280 (14%), Positives = 73/280 (26%), Gaps = 73/280 (26%)
Query: 1000 DVP-GAPGAPKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPD 1058
+ GAP P + I W P Y V+ + D + +A +
Sbjct: 3 HMDLGAPQNPNAKAAGSRKIHFNWLPPS----GKPMGYRVKYWIQGDSES-EAHLLDSKV 57
Query: 1059 TSLKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGP 1118
S+ +T+L +YE +VCA A G+GP
Sbjct: 58 PSV--------------------------------ELTNLYPYCDYEMKVCAYGAQGEGP 85
Query: 1119 WSSSSDIIMCCAPPCAPKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTP---------- 1168
+SS P P L+ ++ + S
Sbjct: 86 YSSLVSCRTHQEVPSEP---GRLAFNVVS-----STVTQL--SWAEPAETNGEITAYEVC 135
Query: 1169 IWTVNGDEVSPDGRIKFETSE-NQTIYRNKSAKRATDSGSYTIQL--VNTVG-SDSASCK 1224
VN D K + ++ + + Y + N G
Sbjct: 136 YGLVNDDNRPIGPMKKVLVDNPKNRMLLIENLRESQP---YRYTVKARNGAGWGPEREAI 192
Query: 1225 VYVVDKPSPPQGP---LDVSDITPESCS-----LSWKPPL 1256
+ + +P P D+ + +S L + +
Sbjct: 193 INLATQPKRPMSIPIIPDIPIVDAQSGEDYDSFLMYSDDV 232
Score = 45.5 bits (108), Expect = 8e-05
Identities = 19/125 (15%), Positives = 27/125 (21%), Gaps = 41/125 (32%)
Query: 1557 KGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVS 1616
+ L W++P G I Y V L++DD
Sbjct: 106 AFNVVSSTVTQLSWAEPAETNG-EITAYEVCYGLVNDD---------------------- 142
Query: 1617 EGKSIGSERGSTAQFLEREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIG 1676
K N + NL E Y + + A N G
Sbjct: 143 ------------------NRPIGPMKKVLVDNPKNRMLLIENLRESQPYRYTVKARNGAG 184
Query: 1677 KSEPS 1681
Sbjct: 185 WGPER 189
Score = 43.2 bits (102), Expect = 4e-04
Identities = 14/61 (22%), Positives = 23/61 (37%), Gaps = 4/61 (6%)
Query: 22 YIIERREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIG---KSEPSICTT 78
Y ++ G + + + + S + NL DYE ++ A A G S C T
Sbjct: 36 YRVKYWIQGDSES-EAHLLDSKVPSVELTNLYPYCDYEMKVCAYGAQGEGPYSSLVSCRT 94
Query: 79 P 79
Sbjct: 95 H 95
Score = 37.8 bits (88), Expect = 0.024
Identities = 11/58 (18%), Positives = 15/58 (25%), Gaps = 5/58 (8%)
Query: 22 YIIERREVGG-----AIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPS 74
Y + V K N + NL E Y + + A N G
Sbjct: 132 YEVCYGLVNDDNRPIGPMKKVLVDNPKNRMLLIENLRESQPYRYTVKARNGAGWGPER 189
Score = 36.7 bits (85), Expect = 0.059
Identities = 12/49 (24%), Positives = 18/49 (36%), Gaps = 3/49 (6%)
Query: 1641 WLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIG---KSEPSICTTP 1686
+ + + S + NL DYE ++ A A G S C T
Sbjct: 47 ESEAHLLDSKVPSVELTNLYPYCDYEMKVCAYGAQGEGPYSSLVSCRTH 95
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3,
ZIP kinase, ZIPK, DAP kinase like kinase, DLK,
structural genomics consortium; HET: 7CP; 1.24A {Homo
sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A*
3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A*
3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A*
3dgk_A ...
Length = 283
Score = 128 bits (323), Expect = 2e-32
Identities = 36/88 (40%), Positives = 57/88 (64%), Gaps = 6/88 (6%)
Query: 816 SSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIP------VSHNLEKELIRKEID 869
S V DHY++ EE+G+G F +V +CR++ TG +AAKFI + +E I +E++
Sbjct: 1 SMVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVN 60
Query: 870 IMNQLHHPKLINLHDAFEDDDEMVLIFE 897
I+ ++ HP +I LHD FE+ ++VLI E
Sbjct: 61 ILREIRHPNIITLHDIFENKTDVVLILE 88
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell
adhesion, immunoglobulin domain; 3.2A {Drosophila
melanogaster} PDB: 2vra_A*
Length = 217
Score = 126 bits (317), Expect = 2e-32
Identities = 50/211 (23%), Positives = 84/211 (39%), Gaps = 16/211 (7%)
Query: 479 KAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPS---ARHHIFAEGD- 534
++P II + +N A C + G P+PTI W K ++ + + F +G
Sbjct: 8 QSPRIIEHPTDLVVKKNEPATLNCKVEGKPEPTIEWFKDGEPVSTNEKKSHRVQFKDGAL 67
Query: 535 TYTLIINSVYGVDADEYVCRAVNKGG-VKSTKAELIIMT-APKFNVPPRFRDTAYFDKGE 592
+ + D EY C A N+ G S A L I F V P+ KGE
Sbjct: 68 FFYRTMQGKKEQDGGEYWCVAKNRVGQAVSRHASLQIAVLRDDFRVEPK---DTRVAKGE 124
Query: 593 NVVVK-IPFTGYPKPKITWYRDNEVIESGGHFHVETSERHAI-----LTIRDASNVDTAP 646
+++ P G P+P + W +D ++ S R I L I + +D
Sbjct: 125 TALLECGPPKGIPEPTLIWIKDGVPLDDLKAMSFGASSRVRIVDGGNLLISNVEPIDEGN 184
Query: 647 YRVVAENDLG-MDSAIVKIQISDRPDPPQFP 676
Y+ +A+N +G +S+ K+ + +
Sbjct: 185 YKCIAQNLVGTRESSYAKLIVQVKAAAHHHH 215
Score = 111 bits (279), Expect = 2e-27
Identities = 44/209 (21%), Positives = 69/209 (33%), Gaps = 21/209 (10%)
Query: 89 EKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREIS--SGARYRVETAGGV- 145
+ P I DLVV + TL C+ G P P W ++G +S +RV+ G
Sbjct: 8 QSPRIIEHPTDLVVKKNEPATLNCKVEGKPEPTIEWFKDGEPVSTNEKKSHRVQFKDGAL 67
Query: 146 -FRLHFNEVTDVDNGDYTCEAYNSVGFAHTSS-RVKI-GTPPRIDRMPNALYIPEGDN-- 200
F + D G+Y C A N VG A + ++I P + +G+
Sbjct: 68 FFYRTMQGKKEQDGGEYWCVAKNRVGQAVSRHASLQIAVLRDDFRVEPKDTRVAKGETAL 127
Query: 201 ---TKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIII-----FIKEIRKEDAG 252
K G + K+G + F I+ I + D G
Sbjct: 128 LECGPPK----GIPEPTLIWIKDGVPLDDLKAMSFGASSRVRIVDGGNLLISNVEPIDEG 183
Query: 253 DYTVNLSNSSGSV-SGTFTINITGLPGPP 280
+Y N G+ S + +
Sbjct: 184 NYKCIAQNLVGTRESSYAKLIVQVKAAAH 212
Score = 111 bits (279), Expect = 2e-27
Identities = 44/209 (21%), Positives = 69/209 (33%), Gaps = 21/209 (10%)
Query: 1696 EKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREIS--SGARYRVETAGGV- 1752
+ P I DLVV + TL C+ G P P W ++G +S +RV+ G
Sbjct: 8 QSPRIIEHPTDLVVKKNEPATLNCKVEGKPEPTIEWFKDGEPVSTNEKKSHRVQFKDGAL 67
Query: 1753 -FRLHFNEVTDVDNGDYTCEAYNSVGFAHTSS-RVKI-GTPPRIDRMPNALYIPEGDN-- 1807
F + D G+Y C A N VG A + ++I P + +G+
Sbjct: 68 FFYRTMQGKKEQDGGEYWCVAKNRVGQAVSRHASLQIAVLRDDFRVEPKDTRVAKGETAL 127
Query: 1808 ---TKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIII-----FIKEIRKEDAG 1859
K G + K+G + F I+ I + D G
Sbjct: 128 LECGPPK----GIPEPTLIWIKDGVPLDDLKAMSFGASSRVRIVDGGNLLISNVEPIDEG 183
Query: 1860 DYTVNLSNSSGSV-SGTFTINITGLPGPP 1887
+Y N G+ S + +
Sbjct: 184 NYKCIAQNLVGTRESSYAKLIVQVKAAAH 212
Score = 82.6 bits (204), Expect = 2e-17
Identities = 32/135 (23%), Positives = 54/135 (40%), Gaps = 13/135 (9%)
Query: 454 AQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCT-ITGCPKPTI 512
A+N G ++ S S+QI A + V ++ + A +C G P+PT+
Sbjct: 88 AKNRVGQAV--SRHASLQI----AVLRDDFRVEPKDTRVAKGETALLECGPPKGIPEPTL 141
Query: 513 SWLKGSREITPSARHHIFAEG-----DTYTLIINSVYGVDADEYVCRAVNKGG-VKSTKA 566
W+K + A D L+I++V +D Y C A N G +S+ A
Sbjct: 142 IWIKDGVPLDDLKAMSFGASSRVRIVDGGNLLISNVEPIDEGNYKCIAQNLVGTRESSYA 201
Query: 567 ELIIMTAPKFNVPPR 581
+LI+ +
Sbjct: 202 KLIVQVKAAAHHHHH 216
Score = 82.6 bits (204), Expect = 2e-17
Identities = 32/135 (23%), Positives = 54/135 (40%), Gaps = 13/135 (9%)
Query: 2061 AQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCT-ITGCPKPTI 2119
A+N G ++ S S+QI A + V ++ + A +C G P+PT+
Sbjct: 88 AKNRVGQAV--SRHASLQI----AVLRDDFRVEPKDTRVAKGETALLECGPPKGIPEPTL 141
Query: 2120 SWLKGSREITPSARHHIFAEG-----DTYTLIINSVYGVDADEYVCRAVNKGG-VKSTKA 2173
W+K + A D L+I++V +D Y C A N G +S+ A
Sbjct: 142 IWIKDGVPLDDLKAMSFGASSRVRIVDGGNLLISNVEPIDEGNYKCIAQNLVGTRESSYA 201
Query: 2174 ELIIMTAPKFNVPPR 2188
+LI+ +
Sbjct: 202 KLIVQVKAAAHHHHH 216
Score = 78.4 bits (193), Expect = 5e-16
Identities = 32/125 (25%), Positives = 51/125 (40%), Gaps = 8/125 (6%)
Query: 2086 KAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPS---ARHHIFAEGD- 2141
++P II + +N A C + G P+PTI W K ++ + + F +G
Sbjct: 8 QSPRIIEHPTDLVVKKNEPATLNCKVEGKPEPTIEWFKDGEPVSTNEKKSHRVQFKDGAL 67
Query: 2142 TYTLIINSVYGVDADEYVCRAVNKGG-VKSTKAELIIMT-APKFNVPPRFRDTAYFESDV 2199
+ + D EY C A N+ G S A L I F V P +DT + +
Sbjct: 68 FFYRTMQGKKEQDGGEYWCVAKNRVGQAVSRHASLQIAVLRDDFRVEP--KDTRVAKGET 125
Query: 2200 VVVVC 2204
++ C
Sbjct: 126 ALLEC 130
Score = 73.7 bits (181), Expect = 2e-14
Identities = 28/115 (24%), Positives = 46/115 (40%), Gaps = 13/115 (11%)
Query: 86 VGGEKPDFIVPLKDLVVPLGKLLTLQC-EATGTPVPKCRWLRNGREI--------SSGAR 136
+ + DF V KD V G+ L+C G P P W+++G + + +R
Sbjct: 104 IAVLRDDFRVEPKDTRVAKGETALLECGPPKGIPEPTLIWIKDGVPLDDLKAMSFGASSR 163
Query: 137 YRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSS-RVKIGTPPRIDRMP 190
R+ G L + V +D G+Y C A N VG +S ++ +
Sbjct: 164 VRIVDGGN---LLISNVEPIDEGNYKCIAQNLVGTRESSYAKLIVQVKAAAHHHH 215
Score = 73.7 bits (181), Expect = 2e-14
Identities = 28/115 (24%), Positives = 46/115 (40%), Gaps = 13/115 (11%)
Query: 1693 VGGEKPDFIVPLKDLVVPLGKLLTLQC-EATGTPVPKCRWLRNGREI--------SSGAR 1743
+ + DF V KD V G+ L+C G P P W+++G + + +R
Sbjct: 104 IAVLRDDFRVEPKDTRVAKGETALLECGPPKGIPEPTLIWIKDGVPLDDLKAMSFGASSR 163
Query: 1744 YRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSS-RVKIGTPPRIDRMP 1797
R+ G L + V +D G+Y C A N VG +S ++ +
Sbjct: 164 VRIVDGGN---LLISNVEPIDEGNYKCIAQNLVGTRESSYAKLIVQVKAAAHHHH 215
Score = 55.3 bits (133), Expect = 3e-08
Identities = 25/110 (22%), Positives = 38/110 (34%), Gaps = 8/110 (7%)
Query: 1134 APKITSDLSIRDMTVLAGEEFTIT-VPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQT 1192
+ +D V GE + P G P+PT IW +G + + F S
Sbjct: 108 RDDFRVEP--KDTRVAKGETALLECGPPKGIPEPTLIWIKDGVPLDDLKAMSFGASSRVR 165
Query: 1193 IYRNKSAK----RATDSGSYTIQLVNTVGSD-SASCKVYVVDKPSPPQGP 1237
I + D G+Y N VG+ S+ K+ V K +
Sbjct: 166 IVDGGNLLISNVEPIDEGNYKCIAQNLVGTRESSYAKLIVQVKAAAHHHH 215
Score = 46.0 bits (109), Expect = 4e-05
Identities = 26/114 (22%), Positives = 40/114 (35%), Gaps = 9/114 (7%)
Query: 1134 APKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQ-- 1191
+P+I + D+ V E T+ G+P+PT W +G+ VS + +
Sbjct: 9 SPRIIEHPT--DLVVKKNEPATLNCKVEGKPEPTIEWFKDGEPVSTNEKKSHRVQFKDGA 66
Query: 1192 -TIYRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYVVDKPSPP---QGPLDVS 1241
YR K+ D G Y N VG + S + P D
Sbjct: 67 LFFYRTMQGKKEQDGGEYWCVAKNRVGQ-AVSRHASLQIAVLRDDFRVEPKDTR 119
Score = 46.0 bits (109), Expect = 5e-05
Identities = 22/119 (18%), Positives = 39/119 (32%), Gaps = 22/119 (18%)
Query: 1430 RDITVKAGEDFSIH-VPFMAFPQPAAFWFANDSIIDDSDTRV----HKQLTMNSASLVVK 1484
+D V GE + P P+P W + +DD + ++ +L++
Sbjct: 116 KDTRVAKGETALLECGPPKGIPEPTLIWIKDGVPLDDLKAMSFGASSRVRIVDGGNLLIS 175
Query: 1485 NSQRSDGGQYRLQLKNPAGFDTATLHSRLRTLPDSVNPRCHLPSSTSKERPKFPTHPNH 1543
N + D G Y+ +N G T S L + + H +H
Sbjct: 176 NVEPIDEGNYKCIAQNLVG----TRESSYAKL-------------IVQVKAAAHHHHHH 217
Score = 35.6 bits (82), Expect = 0.11
Identities = 22/101 (21%), Positives = 40/101 (39%), Gaps = 14/101 (13%)
Query: 1406 PGKQSGPVIVEEQPNKPVMDLSGVRDITVKAGEDFSIHVPFMAFPQPAAFWFANDSIIDD 1465
G+ P I+E P D+ VK E +++ P+P WF + +
Sbjct: 4 AGQYQSPRIIEH----P-------TDLVVKKNEPATLNCKVEGKPEPTIEWFKDGEPVST 52
Query: 1466 SDTRVHKQLTMNSA---SLVVKNSQRSDGGQYRLQLKNPAG 1503
++ + H+ + A ++ + DGG+Y KN G
Sbjct: 53 NEKKSHRVQFKDGALFFYRTMQGKKEQDGGEYWCVAKNRVG 93
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo
sapiens} PDB: 3p40_A*
Length = 404
Score = 131 bits (330), Expect = 2e-32
Identities = 42/225 (18%), Positives = 80/225 (35%), Gaps = 12/225 (5%)
Query: 449 EFRVYAQNEAGLSLPSSASNSVQIK--DPMAAKAPEIIVPLR---NANAIQNHNAQFQCT 503
++ A+ ++ ++++ +A + P + P + ++ + +C
Sbjct: 186 DYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLECI 245
Query: 504 ITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKS 563
+G P P I+W K ++ L I +V D+ EY C A NK G
Sbjct: 246 ASGVPTPDIAWYKKGGDLPSDKAKFENFNK---ALRITNVSEEDSGEYFCLASNKMGSIR 302
Query: 564 TKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHF 623
+ + AP + P+ GE+ + G PKP + W + E ++S
Sbjct: 303 HTISVRVKAAPYWLDEPK---NLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPN 359
Query: 624 HVETSERHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQISD 668
+ RD A Y+ N+ G A + + D
Sbjct: 360 PNREVAGDT-IIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLD 403
Score = 128 bits (324), Expect = 1e-31
Identities = 46/216 (21%), Positives = 81/216 (37%), Gaps = 9/216 (4%)
Query: 63 IAVNAIGKSEPSICTTPVKIC--EFVGGEKPDFIVP---LKDLVVPLGKLLTLQCEATGT 117
A + +K+ V P F+ P +V G L L+C A+G
Sbjct: 190 NARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGV 249
Query: 118 PVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSR 177
P P W + G ++ S + + E L V++ D+G+Y C A N +G +
Sbjct: 250 PTPDIAWYKKGGDLPSD-KAKFENFNKA--LRITNVSEEDSGEYFCLASNKMGSIRHTIS 306
Query: 178 VKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDD 237
V++ P P L + G++ ++ G+ V NG +QS +
Sbjct: 307 VRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAG 366
Query: 238 YIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINI 273
II ++ + Y N SN G + +++
Sbjct: 367 DTII-FRDTQISSRAVYQCNTSNEHGYLLANAFVSV 401
Score = 128 bits (324), Expect = 1e-31
Identities = 46/216 (21%), Positives = 81/216 (37%), Gaps = 9/216 (4%)
Query: 1670 IAVNAIGKSEPSICTTPVKIC--EFVGGEKPDFIVP---LKDLVVPLGKLLTLQCEATGT 1724
A + +K+ V P F+ P +V G L L+C A+G
Sbjct: 190 NARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGV 249
Query: 1725 PVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSR 1784
P P W + G ++ S + + E L V++ D+G+Y C A N +G +
Sbjct: 250 PTPDIAWYKKGGDLPSD-KAKFENFNKA--LRITNVSEEDSGEYFCLASNKMGSIRHTIS 306
Query: 1785 VKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDD 1844
V++ P P L + G++ ++ G+ V NG +QS +
Sbjct: 307 VRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAG 366
Query: 1845 YIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINI 1880
II ++ + Y N SN G + +++
Sbjct: 367 DTII-FRDTQISSRAVYQCNTSNEHGYLLANAFVSV 401
Score = 112 bits (281), Expect = 4e-26
Identities = 51/255 (20%), Positives = 90/255 (35%), Gaps = 34/255 (13%)
Query: 439 IPNLIEGRQYEFR-VY---AQNEAGLSLPSSASNSVQIKDPMAAKAPEIIV-PLRNANAI 493
I GR E+ Y A+N+ G ++ SN ++++ +K+P L
Sbjct: 77 IDFRSGGRPEEYEGEYQCFARNKFG----TALSNRIRLQ---VSKSPLWPKENLDPVVVQ 129
Query: 494 QNHNAQFQCTIT-GCPKPTISWLKGSREITPS-ARHHIFAEGDTYTLIINSVYGVDAD-E 550
+ QC G P P I W+ S E R G L ++V D +
Sbjct: 130 EGAPLTLQCNPPPGLPSPVIFWMSSSMEPITQDKRVSQGHNG---DLYFSNVMLQDMQTD 186
Query: 551 YVCRAVNKGG----------VKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPF 600
Y C A +K + P F P + +G +++++
Sbjct: 187 YSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIA 246
Query: 601 TGYPKPKITWYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAPYRVVAENDLGMDSA 660
+G P P I WY+ + S + + L I + S D+ Y +A N +G
Sbjct: 247 SGVPTPDIAWYKKGGDLPSD---KAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRH 303
Query: 661 IVKIQISDRPDPPQF 675
+ +++ P +
Sbjct: 304 TISVRVK---AAPYW 315
Score = 103 bits (257), Expect = 5e-23
Identities = 46/246 (18%), Positives = 73/246 (29%), Gaps = 26/246 (10%)
Query: 460 LSLPSSASNSVQIKDPMAAKAPEIIV-PLRNANAIQNHNAQFQCTITGCPKPTISWLKGS 518
+ +P S ++ P P I ++ N +C G P P+ W + S
Sbjct: 1 IEIPMDPSIQNELTQP-----PTITKQSAKDHIVDPRDNILIECEAKGNPAPSFHWTRNS 55
Query: 519 REITPSARHHIFAEGDTYTLIINSVYG----VDADEYVCRAVNK-GGVKSTKAELIIMTA 573
R + + + TL+I+ G EY C A NK G S + L + +
Sbjct: 56 RFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKS 115
Query: 574 PKFNVPPRFRDTAYFDKGENVVVK-IPFTGYPKPKITWYRDN-EVIESGGHFHVETSERH 631
P + P D +G + ++ P G P P I W + E I +
Sbjct: 116 PLW--PKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSMEPITQDKRVSQGHN--- 170
Query: 632 AILTIRDASNVDT-APYRVVAENDLGMDSA-------IVKIQISDRPDPPQFPTVEDIGH 683
L + D Y A V P F +
Sbjct: 171 GDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTAS 230
Query: 684 DSLALV 689
+ L
Sbjct: 231 SQMVLR 236
Score = 99 bits (249), Expect = 6e-22
Identities = 37/206 (17%), Positives = 70/206 (33%), Gaps = 12/206 (5%)
Query: 89 EKPDFIV-PLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREI--SSGARYRVETAGG- 144
+ P KD +V + ++CEA G P P W RN R + R + G
Sbjct: 15 QPPTITKQSAKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGT 74
Query: 145 -VFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSS-RVKIGTPPRI-DRMPNALYIPEGDNT 201
V + G+Y C A N G A ++ R+++ P + + + EG
Sbjct: 75 LVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPL 134
Query: 202 KVK-IFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSN 260
++ G + + + D+ + + + + F + ++ DY+ N
Sbjct: 135 TLQCNPPPGLPSPVIFWMSSSMEPITQDK-RVSQGHNGDLYFSNVMLQDMQTDYSCNARF 193
Query: 261 SSG---SVSGTFTINITGLPGPPIGP 283
FT+ + G
Sbjct: 194 HFTHTIQQKNPFTLKVLTTRGVAERT 219
Score = 99 bits (249), Expect = 6e-22
Identities = 37/206 (17%), Positives = 70/206 (33%), Gaps = 12/206 (5%)
Query: 1696 EKPDFIV-PLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREI--SSGARYRVETAGG- 1751
+ P KD +V + ++CEA G P P W RN R + R + G
Sbjct: 15 QPPTITKQSAKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGT 74
Query: 1752 -VFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSS-RVKIGTPPRI-DRMPNALYIPEGDNT 1808
V + G+Y C A N G A ++ R+++ P + + + EG
Sbjct: 75 LVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPL 134
Query: 1809 KVK-IFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSN 1867
++ G + + + D+ + + + + F + ++ DY+ N
Sbjct: 135 TLQCNPPPGLPSPVIFWMSSSMEPITQDK-RVSQGHNGDLYFSNVMLQDMQTDYSCNARF 193
Query: 1868 SSG---SVSGTFTINITGLPGPPIGP 1890
FT+ + G
Sbjct: 194 HFTHTIQQKNPFTLKVLTTRGVAERT 219
Score = 93.0 bits (231), Expect = 1e-19
Identities = 49/250 (19%), Positives = 86/250 (34%), Gaps = 26/250 (10%)
Query: 63 IAVNAIGKSEPSICTTPVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEAT-GTPVPK 121
A N G + + +++ V L +VV G LTLQC G P P
Sbjct: 95 FARNKFG----TALSNRIRL--QVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPV 148
Query: 122 CRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVD-NGDYTCEAYNSVGFAHTSS---- 176
W+ + E + + + G L+F+ V D DY+C A
Sbjct: 149 IFWMSSSMEPITQDKRVSQGHNGD--LYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFT 206
Query: 177 ------RVKIGTPPRI---DRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSD 227
R P ++ + G + ++ +G +++ K G + SD
Sbjct: 207 LKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSD 266
Query: 228 DRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPIGPLDVS 287
K + + I + +ED+G+Y SN GS+ T ++ + P P ++
Sbjct: 267 ---KAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLI 323
Query: 288 EITKHTCTLH 297
L
Sbjct: 324 LAPGEDGRLV 333
Score = 93.0 bits (231), Expect = 1e-19
Identities = 49/250 (19%), Positives = 86/250 (34%), Gaps = 26/250 (10%)
Query: 1670 IAVNAIGKSEPSICTTPVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEAT-GTPVPK 1728
A N G + + +++ V L +VV G LTLQC G P P
Sbjct: 95 FARNKFG----TALSNRIRL--QVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPV 148
Query: 1729 CRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVD-NGDYTCEAYNSVGFAHTSS---- 1783
W+ + E + + + G L+F+ V D DY+C A
Sbjct: 149 IFWMSSSMEPITQDKRVSQGHNGD--LYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFT 206
Query: 1784 ------RVKIGTPPRI---DRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSD 1834
R P ++ + G + ++ +G +++ K G + SD
Sbjct: 207 LKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSD 266
Query: 1835 DRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPIGPLDVS 1894
K + + I + +ED+G+Y SN GS+ T ++ + P P ++
Sbjct: 267 ---KAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLI 323
Query: 1895 EITKHTCTLH 1904
L
Sbjct: 324 LAPGEDGRLV 333
Score = 90.7 bits (225), Expect = 7e-19
Identities = 27/154 (17%), Positives = 57/154 (37%), Gaps = 10/154 (6%)
Query: 2056 EFRVYAQNEAGLSLPSSASNSVQIK--DPMAAKAPEIIVPLR---NANAIQNHNAQFQCT 2110
++ A+ ++ ++++ +A + P + P + ++ + +C
Sbjct: 186 DYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLECI 245
Query: 2111 ITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKS 2170
+G P P I+W K ++ L I +V D+ EY C A NK G
Sbjct: 246 ASGVPTPDIAWYKKGGDLPSDKAKFENFNK---ALRITNVSEEDSGEYFCLASNKMGSIR 302
Query: 2171 TKAELIIMTAPKFNVPPRFRDTAYFESDVVVVVC 2204
+ + AP + P ++ + +VC
Sbjct: 303 HTISVRVKAAPYWLDEP--KNLILAPGEDGRLVC 334
Score = 81.1 bits (200), Expect = 8e-16
Identities = 22/118 (18%), Positives = 40/118 (33%), Gaps = 9/118 (7%)
Query: 2061 AQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTIS 2120
A N+ G + SV++K P + +N + + C G PKPT+
Sbjct: 294 ASNKMG---SIRHTISVRVKAA-----PYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ 345
Query: 2121 WLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIM 2178
W+ + + + T+I Y C N+ G A + ++
Sbjct: 346 WMVNGEPLQSAPPNPNREVAGD-TIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVL 402
Score = 73.0 bits (179), Expect = 3e-13
Identities = 29/144 (20%), Positives = 49/144 (34%), Gaps = 12/144 (8%)
Query: 2067 LSLPSSASNSVQIKDPMAAKAPEIIV-PLRNANAIQNHNAQFQCTITGCPKPTISWLKGS 2125
+ +P S ++ P P I ++ N +C G P P+ W + S
Sbjct: 1 IEIPMDPSIQNELTQP-----PTITKQSAKDHIVDPRDNILIECEAKGNPAPSFHWTRNS 55
Query: 2126 REITPSARHHIFAEGDTYTLIINSVYG----VDADEYVCRAVNK-GGVKSTKAELIIMTA 2180
R + + + TL+I+ G EY C A NK G S + L + +
Sbjct: 56 RFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKS 115
Query: 2181 PKFNVPPRFRDTAYFESDVVVVVC 2204
P + E + + C
Sbjct: 116 PLWPKENLDPVVVQ-EGAPLTLQC 138
Score = 65.7 bits (160), Expect = 8e-11
Identities = 36/170 (21%), Positives = 57/170 (33%), Gaps = 22/170 (12%)
Query: 2046 IPNLIEGRQYEFR-VY---AQNEAGLSLPSSASNSVQIKDPMAAKAPEIIV-PLRNANAI 2100
I GR E+ Y A+N+ G ++ SN ++++ +K+P L
Sbjct: 77 IDFRSGGRPEEYEGEYQCFARNKFG----TALSNRIRLQ---VSKSPLWPKENLDPVVVQ 129
Query: 2101 QNHNAQFQCTIT-GCPKPTISWLKGSREITPS-ARHHIFAEGDTYTLIINSVYGVDAD-E 2157
+ QC G P P I W+ S E R G L ++V D +
Sbjct: 130 EGAPLTLQCNPPPGLPSPVIFWMSSSMEPITQDKRVSQGHNG---DLYFSNVMLQDMQTD 186
Query: 2158 YVCRAVNKGG---VKSTKAELIIMTAPKFN-VPPRFRDTAYFESDVVVVV 2203
Y C A + L ++T P F S +V+
Sbjct: 187 YSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLR 236
Score = 57.6 bits (139), Expect = 2e-08
Identities = 22/96 (22%), Positives = 36/96 (37%), Gaps = 4/96 (4%)
Query: 1134 APKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQTI 1193
AP + +++ + GE+ + +G PKPT W VNG+ + TI
Sbjct: 312 APYWLDEP--KNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTI 369
Query: 1194 YRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYVVD 1229
+ + Y N G A+ V V+D
Sbjct: 370 IFRDTQI--SSRAVYQCNTSNEHGYLLANAFVSVLD 403
Score = 54.5 bits (131), Expect = 2e-07
Identities = 24/137 (17%), Positives = 37/137 (27%), Gaps = 9/137 (6%)
Query: 1110 AVNAAGQGPWSSSSDIIMCCAPPC----APKITSDLSI-RDMTVLAGEEFTITVPFSGRP 1164
A + + P VL G + + SG P
Sbjct: 191 ARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVP 250
Query: 1165 KPTPIWTVNGDEVSPDGRIKFETSENQTIYRNKSAKRATDSGSYTIQLVNTVGSDSASCK 1224
P W G ++ D ++ I + DSG Y N +GS +
Sbjct: 251 TPDIAWYKKGGDLPSDKAKFENFNKALRI---TNVS-EEDSGEYFCLASNKMGSIRHTIS 306
Query: 1225 VYVVDKPSPPQGPLDVS 1241
V V P P ++
Sbjct: 307 VRVKAAPYWLDEPKNLI 323
Score = 49.5 bits (118), Expect = 1e-05
Identities = 17/104 (16%), Positives = 41/104 (39%), Gaps = 12/104 (11%)
Query: 1408 KQSGPVIVEEQPN---KPVMDLSGVRDITVKAGEDFSIHVPFMAFPQPAAFWFANDSIID 1464
+ + V V+ P +P +++ + GED + P+P W N +
Sbjct: 302 RHTISVRVKAAPYWLDEP-------KNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQ 354
Query: 1465 DSDTRVHKQLTMNSASLVVKNSQRSDGGQYRLQLKNPAGFDTAT 1508
+ +++ + +++ +++Q S Y+ N G+ A
Sbjct: 355 SAPPNPNRE--VAGDTIIFRDTQISSRAVYQCNTSNEHGYLLAN 396
Score = 48.3 bits (115), Expect = 2e-05
Identities = 25/114 (21%), Positives = 34/114 (29%), Gaps = 8/114 (7%)
Query: 1134 APKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSP--DGRIKFETSE-N 1190
P IT S +D V + I G P P+ WT N + D R+
Sbjct: 16 PPTITKQ-SAKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGT 74
Query: 1191 QTIYRNKSAKRATDSGSYTIQLVNTVG---SDSASCKVYVVDK-PSPPQGPLDV 1240
I + G Y N G S+ +V P P+ V
Sbjct: 75 LVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVV 128
Score = 44.5 bits (105), Expect = 3e-04
Identities = 18/110 (16%), Positives = 29/110 (26%), Gaps = 4/110 (3%)
Query: 1401 SSNSEPGKQSGPVIVEEQPNKPVMDLSGVRDITVKAGEDFSIHVPFMAFPQPAAFWFAND 1460
N K V E+ + V G D + P P W+
Sbjct: 201 QKNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPTPDIAWYKKG 260
Query: 1461 SIIDDSDTRVHKQLTMNSASLVVKNSQRSDGGQYRLQLKNPAGFDTATLH 1510
+ + + +L + N D G+Y N G T+
Sbjct: 261 GDLPSDKAKFE----NFNKALRITNVSEEDSGEYFCLASNKMGSIRHTIS 306
Score = 42.5 bits (100), Expect = 0.001
Identities = 19/110 (17%), Positives = 29/110 (26%), Gaps = 10/110 (9%)
Query: 1431 DITVKAGEDFSIH-VPFMAFPQPAAFWFANDSIIDDSDTRVHKQLTMNSASLVVKNSQRS 1489
+ V+ G ++ P P P FW ++ D RV ++ L N
Sbjct: 125 PVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSMEPITQDKRVS---QGHNGDLYFSNVMLQ 181
Query: 1490 D-GGQYRLQLKNPAGFDT-----ATLHSRLRTLPDSVNPRCHLPSSTSKE 1533
D Y + TL P P T+
Sbjct: 182 DMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASS 231
Score = 41.8 bits (98), Expect = 0.002
Identities = 25/179 (13%), Positives = 49/179 (27%), Gaps = 13/179 (7%)
Query: 1064 VLWVSEGKSIGSERGSTAQFLEL-LLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPWSSS 1122
W + + + I R E +E E++ A N G + S
Sbjct: 49 FHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGT---ALS 105
Query: 1123 SDIIMCCAPPCAPKITSDLSIRDMTVLAGEEFTIT-VPFSGRPKPTPIWTVNGDEVSPDG 1181
+ I + + P + ++ + V G T+ P G P P W + E
Sbjct: 106 NRIRLQVSKS--PLWPKE-NLDPVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSMEPITQD 162
Query: 1182 RIKFETSENQTIYRNKSAKRATDSGSYTIQLVNTVGSD---SASCKVYVVDKPSPPQGP 1237
+ + N +Y + Y+ + V+ +
Sbjct: 163 K-RVSQGHNGDLYF-SNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERT 219
Score = 38.3 bits (89), Expect = 0.028
Identities = 13/98 (13%), Positives = 25/98 (25%), Gaps = 13/98 (13%)
Query: 1409 QSGPVIVEEQPNKPVMDLSGVRDITVKAGEDFSIHVPFMAFPQPAAFWFANDSIIDDSDT 1468
P I ++ +D V ++ I P P+ W N + +
Sbjct: 14 TQPPTITKQSA----------KDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKD 63
Query: 1469 RVHKQLTMNSA---SLVVKNSQRSDGGQYRLQLKNPAG 1503
+ G+Y+ +N G
Sbjct: 64 PRVSMRRRSGTLVIDFRSGGRPEEYEGEYQCFARNKFG 101
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus
gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB:
2om5_A
Length = 382
Score = 130 bits (328), Expect = 3e-32
Identities = 47/232 (20%), Positives = 72/232 (31%), Gaps = 17/232 (7%)
Query: 439 IPNLIEGRQYEFRVYAQNEAGLSLPSSASN----SVQIKDPMAAKAPEIIVPLRNANAIQ 494
I + +A + S S S+ +D + A+
Sbjct: 162 IAKTEASDLGNYSCFATSHIDFITKSVFSKFSQLSLAAEDARQYAPSIKAKFPADTYALT 221
Query: 495 NHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCR 554
+C G P P I W K T L I +V D Y C
Sbjct: 222 GQMVTLECFAFGNPVPQIKWRKLDGSQTSKWLSS------EPLLHIQNVDFEDEGTYECE 275
Query: 555 AVNKGGVKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDN 614
A N G + + +II P + D G ++ +G P+P + W RD
Sbjct: 276 AENIKGRDTYQGRIIIHAQPDWLDVIT---DTEADIGSDLRWSCVASGKPRPAVRWLRDG 332
Query: 615 EVIESGGHFHVETSERHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQI 666
+ + S V E L D+ Y+ VAEN G A ++ +
Sbjct: 333 QPLASQNRIEVSGGE----LRFSKLVLEDSGMYQCVAENKHGTVYASAELTV 380
Score = 119 bits (301), Expect = 9e-29
Identities = 45/217 (20%), Positives = 81/217 (37%), Gaps = 14/217 (6%)
Query: 63 IAVNAIGKSEPSICTTPVKI---CEFVGGEKPDFIVPL-KDLVVPLGKLLTLQCEATGTP 118
A + I S+ + ++ E P D G+++TL+C A G P
Sbjct: 176 FATSHIDFITKSVFSKFSQLSLAAEDARQYAPSIKAKFPADTYALTGQMVTLECFAFGNP 235
Query: 119 VPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRV 178
VP+ +W + +S + ++ + LH V D G Y CEA N G R+
Sbjct: 236 VPQIKWRKLDGSQTS----KWLSSEPL--LHIQNVDFEDEGTYECEAENIKGRDTYQGRI 289
Query: 179 KIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDY 238
I P + G + + +G V ++G+ + S +R + V
Sbjct: 290 IIHAQPDWLDVITDTEADIGSDLRWSCVASGKPRPAVRWLRDGQPLASQNRIE--VSGGE 347
Query: 239 IIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITG 275
+ ++ ED+G Y N G+V + + +
Sbjct: 348 LR--FSKLVLEDSGMYQCVAENKHGTVYASAELTVQA 382
Score = 119 bits (301), Expect = 9e-29
Identities = 45/217 (20%), Positives = 81/217 (37%), Gaps = 14/217 (6%)
Query: 1670 IAVNAIGKSEPSICTTPVKI---CEFVGGEKPDFIVPL-KDLVVPLGKLLTLQCEATGTP 1725
A + I S+ + ++ E P D G+++TL+C A G P
Sbjct: 176 FATSHIDFITKSVFSKFSQLSLAAEDARQYAPSIKAKFPADTYALTGQMVTLECFAFGNP 235
Query: 1726 VPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRV 1785
VP+ +W + +S + ++ + LH V D G Y CEA N G R+
Sbjct: 236 VPQIKWRKLDGSQTS----KWLSSEPL--LHIQNVDFEDEGTYECEAENIKGRDTYQGRI 289
Query: 1786 KIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDY 1845
I P + G + + +G V ++G+ + S +R + V
Sbjct: 290 IIHAQPDWLDVITDTEADIGSDLRWSCVASGKPRPAVRWLRDGQPLASQNRIE--VSGGE 347
Query: 1846 IIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITG 1882
+ ++ ED+G Y N G+V + + +
Sbjct: 348 LR--FSKLVLEDSGMYQCVAENKHGTVYASAELTVQA 382
Score = 106 bits (265), Expect = 4e-24
Identities = 45/232 (19%), Positives = 68/232 (29%), Gaps = 25/232 (10%)
Query: 454 AQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTIT-GCPKPTI 512
A N G + S ++ + F C+ P +
Sbjct: 81 ATNARG----TVVSREASLR--FGFLQEFSAEERDPVKITEGWGVMFTCSPPPHYPALSY 134
Query: 513 SWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGG-----VKSTKAE 567
WL A F T L I D Y C A + V S ++
Sbjct: 135 RWLLNEFPNFIPADGRRFVSQTTGNLYIAKTEASDLGNYSCFATSHIDFITKSVFSKFSQ 194
Query: 568 LIIMTAPKFNVPPRFRDTAYFD----KGENVVVKIPFTGYPKPKITWYRDNEVIESGGHF 623
L + P + D G+ V ++ G P P+I W + + S
Sbjct: 195 LSLAAEDARQYAPSIKAKFPADTYALTGQMVTLECFAFGNPVPQIKWRKLDGSQTS---- 250
Query: 624 HVETSERHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQISDRPDPPQF 675
+SE L I++ D Y AEN G D+ +I I P +
Sbjct: 251 KWLSSEPL--LHIQNVDFEDEGTYECEAENIKGRDTYQGRIIIH---AQPDW 297
Score = 104 bits (261), Expect = 1e-23
Identities = 37/210 (17%), Positives = 57/210 (27%), Gaps = 13/210 (6%)
Query: 480 APEIIVPLRNANAIQNH---NAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTY 536
P + + C P T W E+
Sbjct: 4 GPVFEEQPAHTLFPEGSAEEKVTLTCRARANPPATYRWKMNGTELKMGPDSRYRLVAGD- 62
Query: 537 TLIINSVYGVDADEYVCRAVNKGG-VKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENVV 595
+I N V DA Y C A N G V S +A L +F+ RD +G V+
Sbjct: 63 LVISNPVKAKDAGSYQCVATNARGTVVSREASLRFGFLQEFSAEE--RDPVKITEGWGVM 120
Query: 596 VK-IPFTGYPKPKITWYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAPYRVVAEND 654
P YP W + S+ L I D Y A +
Sbjct: 121 FTCSPPPHYPALSYRWLLNEFPNFIPADGRRFVSQTTGNLYIAKTEASDLGNYSCFATSH 180
Query: 655 LGMD-----SAIVKIQISDRPDPPQFPTVE 679
+ S ++ ++ P+++
Sbjct: 181 IDFITKSVFSKFSQLSLAAEDARQYAPSIK 210
Score = 101 bits (253), Expect = 1e-22
Identities = 66/412 (16%), Positives = 131/412 (31%), Gaps = 59/412 (14%)
Query: 183 PPRIDRMPNALYIPEGDNTKVKIFY---AGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYI 239
P + P PEG + + P NG ++ ++ ++ +
Sbjct: 4 GPVFEEQPAHTLFPEGSAEEKVTLTCRARANPPATYRWKMNGTELKMGPDSRYRLVAGDL 63
Query: 240 IIFIKEIRKEDAGDYTVNLSNSSGSV-SGTFTINITGLPGPPIGPLDVSEITK-HTCTLH 297
+I ++ +DAG Y +N+ G+V S ++ L D +IT+
Sbjct: 64 VI-SNPVKAKDAGSYQCVATNARGTVVSREASLRFGFLQEFSAEERDPVKITEGWGVMFT 122
Query: 298 WNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNEN 357
+PP + L +++ +P + + + A +
Sbjct: 123 CSPPPHYPALSYR-WLLNEFPNFIPADGRRFVSQTTGNLYIAKTEASDLGNYSCFATSHI 181
Query: 358 GM----------------GPPLEGINPIKAKSPYDKPSPPGIPVVTQ--VGGD-FVNLSW 398
+ IKAK P D + G V + G+ + W
Sbjct: 182 DFITKSVFSKFSQLSLAAEDARQYAPSIKAKFPADTYALTGQMVTLECFAFGNPVPQIKW 241
Query: 399 DKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEA 458
K GS+ + S+ ++I N+ + + A+N
Sbjct: 242 RK---LDGSQT------SKWLSSE------------PLLHIQNVDFEDEGTYECEAENIK 280
Query: 459 GLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGS 518
G + + I P+ + + + A + ++ C +G P+P + WL+
Sbjct: 281 G---RDTYQGRIIIHAQ-----PDWLDVITDTEADIGSDLRWSCVASGKPRPAVRWLRDG 332
Query: 519 REITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELII 570
+ + R + L + + D+ Y C A NK G AEL +
Sbjct: 333 QPLASQNRIEV----SGGELRFSKLVLEDSGMYQCVAENKHGTVYASAELTV 380
Score = 101 bits (253), Expect = 1e-22
Identities = 66/412 (16%), Positives = 131/412 (31%), Gaps = 59/412 (14%)
Query: 1790 PPRIDRMPNALYIPEGDNTKVKIFY---AGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYI 1846
P + P PEG + + P NG ++ ++ ++ +
Sbjct: 4 GPVFEEQPAHTLFPEGSAEEKVTLTCRARANPPATYRWKMNGTELKMGPDSRYRLVAGDL 63
Query: 1847 IIFIKEIRKEDAGDYTVNLSNSSGSV-SGTFTINITGLPGPPIGPLDVSEITK-HTCTLH 1904
+I ++ +DAG Y +N+ G+V S ++ L D +IT+
Sbjct: 64 VI-SNPVKAKDAGSYQCVATNARGTVVSREASLRFGFLQEFSAEERDPVKITEGWGVMFT 122
Query: 1905 WNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNEN 1964
+PP + L +++ +P + + + A +
Sbjct: 123 CSPPPHYPALSYR-WLLNEFPNFIPADGRRFVSQTTGNLYIAKTEASDLGNYSCFATSHI 181
Query: 1965 GM----------------GPPLEGINPIKAKSPYDKPSPPGIPVVTQ--VGGD-FVNLSW 2005
+ IKAK P D + G V + G+ + W
Sbjct: 182 DFITKSVFSKFSQLSLAAEDARQYAPSIKAKFPADTYALTGQMVTLECFAFGNPVPQIKW 241
Query: 2006 DKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEA 2065
K GS+ + S+ ++I N+ + + A+N
Sbjct: 242 RK---LDGSQT------SKWLSSE------------PLLHIQNVDFEDEGTYECEAENIK 280
Query: 2066 GLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGS 2125
G + + I P+ + + + A + ++ C +G P+P + WL+
Sbjct: 281 G---RDTYQGRIIIHAQ-----PDWLDVITDTEADIGSDLRWSCVASGKPRPAVRWLRDG 332
Query: 2126 REITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELII 2177
+ + R + L + + D+ Y C A NK G AEL +
Sbjct: 333 QPLASQNRIEV----SGGELRFSKLVLEDSGMYQCVAENKHGTVYASAELTV 380
Score = 96.9 bits (241), Expect = 4e-21
Identities = 40/195 (20%), Positives = 64/195 (32%), Gaps = 11/195 (5%)
Query: 91 PDFIVPLKDLVVPLGKL---LTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFR 147
P F + P G +TL C A P RW NG E+ G R G
Sbjct: 5 PVFEEQPAHTLFPEGSAEEKVTLTCRARANPPATYRWKMNGTELKMGPDSRYRLVAGDL- 63
Query: 148 LHFNEVTDVDNGDYTCEAYNSVGFAHT-SSRVKIGTPPRI-DRMPNALYIPEGDNTKVKI 205
+ N V D G Y C A N+ G + + ++ G + + I EG
Sbjct: 64 VISNPVKAKDAGSYQCVATNARGTVVSREASLRFGFLQEFSAEERDPVKITEGWGVMFTC 123
Query: 206 FYAGDQPM-EVSLTKNGR--VVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSS 262
P N + +D R +F + I + D G+Y+ ++
Sbjct: 124 SPPPHYPALSYRWLLNEFPNFIPADGR-RFVSQTTGNLY-IAKTEASDLGNYSCFATSHI 181
Query: 263 GSVSGTFTINITGLP 277
++ + + L
Sbjct: 182 DFITKSVFSKFSQLS 196
Score = 96.9 bits (241), Expect = 4e-21
Identities = 40/195 (20%), Positives = 64/195 (32%), Gaps = 11/195 (5%)
Query: 1698 PDFIVPLKDLVVPLGKL---LTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFR 1754
P F + P G +TL C A P RW NG E+ G R G
Sbjct: 5 PVFEEQPAHTLFPEGSAEEKVTLTCRARANPPATYRWKMNGTELKMGPDSRYRLVAGDL- 63
Query: 1755 LHFNEVTDVDNGDYTCEAYNSVGFAHT-SSRVKIGTPPRI-DRMPNALYIPEGDNTKVKI 1812
+ N V D G Y C A N+ G + + ++ G + + I EG
Sbjct: 64 VISNPVKAKDAGSYQCVATNARGTVVSREASLRFGFLQEFSAEERDPVKITEGWGVMFTC 123
Query: 1813 FYAGDQPM-EVSLTKNGR--VVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSS 1869
P N + +D R +F + I + D G+Y+ ++
Sbjct: 124 SPPPHYPALSYRWLLNEFPNFIPADGR-RFVSQTTGNLY-IAKTEASDLGNYSCFATSHI 181
Query: 1870 GSVSGTFTINITGLP 1884
++ + + L
Sbjct: 182 DFITKSVFSKFSQLS 196
Score = 94.5 bits (235), Expect = 3e-20
Identities = 43/241 (17%), Positives = 75/241 (31%), Gaps = 31/241 (12%)
Query: 63 IAVNAIGKSEPSICTTPVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEAT-GTPVPK 121
+A NA G ++ + + G + + + G + C P
Sbjct: 80 VATNARG----TVVSREASL--RFGFLQEFSAEERDPVKITEGWGVMFTCSPPPHYPALS 133
Query: 122 CRWLRNGREI---SSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRV 178
RWL N + G R+ +T G L+ + D G+Y+C A + + F S
Sbjct: 134 YRWLLNEFPNFIPADGRRFVSQTTG---NLYIAKTEASDLGNYSCFATSHIDFITKSVFS 190
Query: 179 KIGT------------PPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQS 226
K P + P Y G ++ F G+ ++ K
Sbjct: 191 KFSQLSLAAEDARQYAPSIKAKFPADTYALTGQMVTLECFAFGNPVPQIKWRKLDG---- 246
Query: 227 DDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPIGPLDV 286
+ + + ++ I+ + ED G Y N G + I I P D
Sbjct: 247 -SQTSKWLSSEPLLH-IQNVDFEDEGTYECEAENIKGRDTYQGRIIIHAQPDWLDVITDT 304
Query: 287 S 287
Sbjct: 305 E 305
Score = 94.5 bits (235), Expect = 3e-20
Identities = 43/241 (17%), Positives = 75/241 (31%), Gaps = 31/241 (12%)
Query: 1670 IAVNAIGKSEPSICTTPVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEAT-GTPVPK 1728
+A NA G ++ + + G + + + G + C P
Sbjct: 80 VATNARG----TVVSREASL--RFGFLQEFSAEERDPVKITEGWGVMFTCSPPPHYPALS 133
Query: 1729 CRWLRNGREI---SSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRV 1785
RWL N + G R+ +T G L+ + D G+Y+C A + + F S
Sbjct: 134 YRWLLNEFPNFIPADGRRFVSQTTG---NLYIAKTEASDLGNYSCFATSHIDFITKSVFS 190
Query: 1786 KIGT------------PPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQS 1833
K P + P Y G ++ F G+ ++ K
Sbjct: 191 KFSQLSLAAEDARQYAPSIKAKFPADTYALTGQMVTLECFAFGNPVPQIKWRKLDG---- 246
Query: 1834 DDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPIGPLDV 1893
+ + + ++ I+ + ED G Y N G + I I P D
Sbjct: 247 -SQTSKWLSSEPLLH-IQNVDFEDEGTYECEAENIKGRDTYQGRIIIHAQPDWLDVITDT 304
Query: 1894 S 1894
Sbjct: 305 E 305
Score = 83.4 bits (206), Expect = 1e-16
Identities = 30/163 (18%), Positives = 44/163 (26%), Gaps = 12/163 (7%)
Query: 2046 IPNLIEGRQYEFRVYAQNEAGLSLPSSASN----SVQIKDPMAAKAPEIIVPLRNANAIQ 2101
I + +A + S S S+ +D + A+
Sbjct: 162 IAKTEASDLGNYSCFATSHIDFITKSVFSKFSQLSLAAEDARQYAPSIKAKFPADTYALT 221
Query: 2102 NHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCR 2161
+C G P P I W K T L I +V D Y C
Sbjct: 222 GQMVTLECFAFGNPVPQIKWRKLDGSQTSKWLSS------EPLLHIQNVDFEDEGTYECE 275
Query: 2162 AVNKGGVKSTKAELIIMTAPKFNVPPRFRDTAYFESDVVVVVC 2204
A N G + + +II P + DT + C
Sbjct: 276 AENIKGRDTYQGRIIIHAQPDWLDVI--TDTEADIGSDLRWSC 316
Score = 71.8 bits (176), Expect = 7e-13
Identities = 25/122 (20%), Positives = 33/122 (27%), Gaps = 6/122 (4%)
Query: 2087 APEIIVPLRNANAIQNH---NAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTY 2143
P + + C P T W E+
Sbjct: 4 GPVFEEQPAHTLFPEGSAEEKVTLTCRARANPPATYRWKMNGTELKMGPDSRYRLVAGD- 62
Query: 2144 TLIINSVYGVDADEYVCRAVNKGG-VKSTKAELIIMTAPKFNVPPRFRDTAYFESDVVVV 2202
+I N V DA Y C A N G V S +A L +F+ R E V+
Sbjct: 63 LVISNPVKAKDAGSYQCVATNARGTVVSREASLRFGFLQEFSAEERDPVKIT-EGWGVMF 121
Query: 2203 VC 2204
C
Sbjct: 122 TC 123
Score = 66.0 bits (161), Expect = 5e-11
Identities = 25/149 (16%), Positives = 37/149 (24%), Gaps = 14/149 (9%)
Query: 2061 AQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTIT-GCPKPTI 2119
A N G + S ++ + F C+ P +
Sbjct: 81 ATNARG----TVVSREASLR--FGFLQEFSAEERDPVKITEGWGVMFTCSPPPHYPALSY 134
Query: 2120 SWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGG-----VKSTKAE 2174
WL A F T L I D Y C A + V S ++
Sbjct: 135 RWLLNEFPNFIPADGRRFVSQTTGNLYIAKTEASDLGNYSCFATSHIDFITKSVFSKFSQ 194
Query: 2175 LIIMTAPKFNVPPRFRDTAYFESDVVVVV 2203
L + P A F +D +
Sbjct: 195 LSLAAEDARQYAPSI--KAKFPADTYALT 221
Score = 54.9 bits (132), Expect = 2e-07
Identities = 21/94 (22%), Positives = 35/94 (37%), Gaps = 7/94 (7%)
Query: 1134 APKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQTI 1193
P + D G + + SG+P+P W +G ++ RI+ +
Sbjct: 294 QPDWLDVI--TDTEADIGSDLRWSCVASGKPRPAVRWLRDGQPLASQNRIEV---SGGEL 348
Query: 1194 YRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYV 1227
+K DSG Y N G+ AS ++ V
Sbjct: 349 RFSKLVL--EDSGMYQCVAENKHGTVYASAELTV 380
Score = 54.1 bits (130), Expect = 3e-07
Identities = 25/197 (12%), Positives = 48/197 (24%), Gaps = 10/197 (5%)
Query: 573 APKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSERHA 632
P F P E V + P W + ++ G
Sbjct: 4 GPVFEEQPAHTLFPEGSAEEKVTLTCRARANPPATYRWKMNGTELKMGPDSRYRLVA-GD 62
Query: 633 ILTIRDASNVDTAPYRVVAENDLG-MDSAIVKIQISDRPDPPQFPTVEDIGHDSLALVWR 691
++ D Y+ VA N G + S ++ + + +++
Sbjct: 63 LVISNPVKAKDAGSYQCVATNARGTVVSREASLRFGFLQEFSAEERDPVKITEGWGVMFT 122
Query: 692 APIWDGGSNITNYIVEKREHPMSSWIRVGNTRFTTMA-----ITGLSPGHQYEFRVYAEN 746
++ Y E P ++I RF + I + +A +
Sbjct: 123 CSPPPHYPALS-YRWLLNEFP--NFIPADGRRFVSQTTGNLYIAKTEASDLGNYSCFATS 179
Query: 747 VYGRSDPSTTSDLITTK 763
S S
Sbjct: 180 HIDFITKSVFSKFSQLS 196
Score = 49.5 bits (118), Expect = 1e-05
Identities = 19/108 (17%), Positives = 32/108 (29%), Gaps = 8/108 (7%)
Query: 1134 APKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQTI 1193
AP I + D L G+ T+ G P P W + +
Sbjct: 206 APSIKAKFP-ADTYALTGQMVTLECFAFGNPVPQIKWRKLDGS-QTSKWLSS----EPLL 259
Query: 1194 YRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYVVDKPSPPQGPLDVS 1241
+ D G+Y + N G D+ ++ + +P D
Sbjct: 260 HIQNV--DFEDEGTYECEAENIKGRDTYQGRIIIHAQPDWLDVITDTE 305
Score = 44.5 bits (105), Expect = 3e-04
Identities = 17/114 (14%), Positives = 36/114 (31%), Gaps = 11/114 (9%)
Query: 1430 RDITVKAGEDFSIH-VPFMAFPQPAAFWFANDS-IIDDSDTRVHKQLTMNSASLVVKNSQ 1487
+ + G P +P + W N+ +D R ++ + +L + ++
Sbjct: 109 DPVKITEGWGVMFTCSPPPHYPALSYRWLLNEFPNFIPADGRRF--VSQTTGNLYIAKTE 166
Query: 1488 RSDGGQYRLQLKNPAGFDTATLHSRLRTLPDSVNPRCHLPSSTSKERPKFPTHP 1541
SD G Y + F T ++ S+ L + + P
Sbjct: 167 ASDLGNYSCFATSHIDFITKSVFSKFSQLSLAAED-------ARQYAPSIKAKF 213
Score = 43.7 bits (103), Expect = 6e-04
Identities = 19/104 (18%), Positives = 32/104 (30%), Gaps = 15/104 (14%)
Query: 1408 KQSGPVIVEEQP---NKPVMDLSGVRDITVKAGEDFSIHVPFMAFPQPAAFWFANDSIID 1464
G +I+ QP + D G D P+PA W + +
Sbjct: 284 TYQGRIIIHAQPDWLDVI-------TDTEADIGSDLRWSCVASGKPRPAVRWLRDGQPLA 336
Query: 1465 DSDTRVHKQLTMNSASLVVKNSQRSDGGQYRLQLKNPAGFDTAT 1508
+ R+ ++ L D G Y+ +N G A+
Sbjct: 337 SQN-RIE----VSGGELRFSKLVLEDSGMYQCVAENKHGTVYAS 375
Score = 42.2 bits (99), Expect = 0.002
Identities = 29/192 (15%), Positives = 50/192 (26%), Gaps = 26/192 (13%)
Query: 1324 TAKFPFTVPDPPGQPQIVDWDTNNATLMWDRPRTDGGSKIQGYKMLLKTPTGELPTTIWS 1383
F + P W N DG + TG L +
Sbjct: 118 GVMFTCSPPPHYPALSYR-WLLNEFPNF---IPADGRRFVS-------QTTGNL---YIA 163
Query: 1384 KIRPTSSTVY-CKDT-TMNSSNSEPGKQSGPVIVEEQPNK---PVMDLSGVRDITVKAGE 1438
K + Y C T ++ + + + + + P + D G+
Sbjct: 164 KTEASDLGNYSCFATSHIDFITKSVFSKFSQLSLAAEDARQYAPSIKAKFPADTYALTGQ 223
Query: 1439 DFSIHVPFMAFPQPAAFWFANDSIIDDSDTRVHKQLTMNSASLVVKNSQRSDGGQYRLQL 1498
++ P P W D + + L ++N D G Y +
Sbjct: 224 MVTLECFAFGNPVPQIKWRKLDG-------SQTSKWLSSEPLLHIQNVDFEDEGTYECEA 276
Query: 1499 KNPAGFDTATLH 1510
+N G DT
Sbjct: 277 ENIKGRDTYQGR 288
Score = 39.1 bits (91), Expect = 0.015
Identities = 21/108 (19%), Positives = 32/108 (29%), Gaps = 4/108 (3%)
Query: 1134 APKITSD-LSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQT 1192
P A E+ T+T P T W +NG E+ ++
Sbjct: 4 GPVFEEQPAHTLFPEGSAEEKVTLTCRARANPPATYRWKMNGTELKMGPDSRYRLVAGDL 63
Query: 1193 IYRNKSAKRATDSGSYTIQLVNTVGS-DSASCKVYVVDKPSPPQGPLD 1239
+ N +A D+GSY N G+ S + D
Sbjct: 64 VISNPV--KAKDAGSYQCVATNARGTVVSREASLRFGFLQEFSAEERD 109
Score = 35.6 bits (82), Expect = 0.17
Identities = 22/110 (20%), Positives = 37/110 (33%), Gaps = 16/110 (14%)
Query: 1408 KQSGPVIVEEQPNKPVMDLSGVRDITVKAGEDFSIHVPFMAFPQPAAFWFANDSIIDDSD 1467
+ GPV E+ + A E ++ A P W N + +
Sbjct: 1 RSYGPVFEEQ--------PAHTLFPEGSAEEKVTLTCRARANPPATYRWKMNGTELKMGP 52
Query: 1468 TRVHKQLTMNSASLVVKNS-QRSDGGQYRLQLKNPAGFDTATLHSRLRTL 1516
+ + + LV+ N + D G Y+ N G T+ SR +L
Sbjct: 53 ---DSRYRLVAGDLVISNPVKAKDAGSYQCVATNARG----TVVSREASL 95
Score = 35.2 bits (81), Expect = 0.22
Identities = 17/103 (16%), Positives = 34/103 (33%), Gaps = 6/103 (5%)
Query: 1142 SIRDMTVLAGEEFTIT-VPFSGRPKPTPIWTVNGDE--VSPDGRIKFETSENQTIYRNKS 1198
+ + G T P P + W +N + DGR +F + +Y K+
Sbjct: 107 ERDPVKITEGWGVMFTCSPPPHYPALSYRWLLNEFPNFIPADGR-RFVSQTTGNLYIAKT 165
Query: 1199 AKRATDSGSYTIQLVNTVGSDSASCKVYVVDKPSPPQGPLDVS 1241
A+D G+Y+ + + + S + +
Sbjct: 166 --EASDLGNYSCFATSHIDFITKSVFSKFSQLSLAAEDARQYA 206
>1x5y_A Myosin binding protein C, fast-type; fast MYBP-C, fibronectin type
III domain containing protein, cytoskeleton, muscle
contraction; NMR {Mus musculus} SCOP: b.1.2.1
Length = 111
Score = 121 bits (305), Expect = 3e-32
Identities = 28/98 (28%), Positives = 41/98 (41%), Gaps = 2/98 (2%)
Query: 670 PDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSWIRV--GNTRFTTM 727
PQ TVED+ + L WR P G I Y+VE W+
Sbjct: 9 TSAPQHLTVEDVTDTTTTLKWRPPDRIGAGGIDGYLVEYCLEGSEEWVPANKEPVERCGF 68
Query: 728 AITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKDT 765
+ L G + FRV N+ GRS+P+T +T +++
Sbjct: 69 TVKDLPTGARILFRVVGVNIAGRSEPATLLQPVTIRES 106
Score = 115 bits (290), Expect = 3e-30
Identities = 27/101 (26%), Positives = 38/101 (37%)
Query: 378 PSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQI 437
S P V V L W P G I GY ++ GS+ W N
Sbjct: 9 TSAPQHLTVEDVTDTTTTLKWRPPDRIGAGGIDGYLVEYCLEGSEEWVPANKEPVERCGF 68
Query: 438 NIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAA 478
+ +L G + FRV N AG S P++ V I++ +
Sbjct: 69 TVKDLPTGARILFRVVGVNIAGRSEPATLLQPVTIRESGPS 109
Score = 115 bits (290), Expect = 3e-30
Identities = 27/101 (26%), Positives = 38/101 (37%)
Query: 1985 PSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQI 2044
S P V V L W P G I GY ++ GS+ W N
Sbjct: 9 TSAPQHLTVEDVTDTTTTLKWRPPDRIGAGGIDGYLVEYCLEGSEEWVPANKEPVERCGF 68
Query: 2045 NIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAA 2085
+ +L G + FRV N AG S P++ V I++ +
Sbjct: 69 TVKDLPTGARILFRVVGVNIAGRSEPATLLQPVTIRESGPS 109
Score = 113 bits (284), Expect = 2e-29
Identities = 31/107 (28%), Positives = 42/107 (39%), Gaps = 5/107 (4%)
Query: 1231 PSPPQGPLDVSDITPESCSLSWKPPLDDGGSPITNYVVEKYESATGFWSKLSSF-VRSPA 1289
S PQ V D+T + +L W+PP G I Y+VE + W + V
Sbjct: 9 TSAPQHL-TVEDVTDTTTTLKWRPPDRIGAGGIDGYLVEYCLEGSEEWVPANKEPVERCG 67
Query: 1290 YDVFGLETNRQYRFRVRAENQYGVSEPLELDNSITAKFPFTVPDPPG 1336
+ V L T + FRV N G SEP L +T + G
Sbjct: 68 FTVKDLPTGARILFRVVGVNIAGRSEPATLLQPVTIRES---GPSSG 111
Score = 109 bits (274), Expect = 4e-28
Identities = 28/103 (27%), Positives = 43/103 (41%), Gaps = 1/103 (0%)
Query: 902 PHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTKVSSY-VTTPFV 960
P++L ++ + TL W PP G I Y+VE S W + V
Sbjct: 9 TSAPQHLTVEDVTDTTTTLKWRPPDRIGAGGIDGYLVEYCLEGSEEWVPANKEPVERCGF 68
Query: 961 RVRNLAIGSTYEFRVMAENQYGLSKPALTIDPIKAKHPFDVPG 1003
V++L G+ FRV+ N G S+PA + P+ + G
Sbjct: 69 TVKDLPTGARILFRVVGVNIAGRSEPATLLQPVTIRESGPSSG 111
Score = 107 bits (268), Expect = 3e-27
Identities = 29/110 (26%), Positives = 40/110 (36%), Gaps = 5/110 (4%)
Query: 274 TGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWI-CISTTCH 332
+G P L V ++T T TL W PP G + Y+VE W+
Sbjct: 6 SGPTSAP-QHLTVEDVTDTTTTLKWRPPDRIGAGGIDGYLVEYCLEGSEEWVPANKEPVE 64
Query: 333 DTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPG 382
F V+ L G LF V+ VN G P + P+ + G
Sbjct: 65 RCGFTVKDLPTGARILFRVVGVNIAGRSEPATLLQPVTIRES---GPSSG 111
Score = 107 bits (268), Expect = 3e-27
Identities = 29/110 (26%), Positives = 40/110 (36%), Gaps = 5/110 (4%)
Query: 1881 TGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWI-CISTTCH 1939
+G P L V ++T T TL W PP G + Y+VE W+
Sbjct: 6 SGPTSAP-QHLTVEDVTDTTTTLKWRPPDRIGAGGIDGYLVEYCLEGSEEWVPANKEPVE 64
Query: 1940 DTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPG 1989
F V+ L G LF V+ VN G P + P+ + G
Sbjct: 65 RCGFTVKDLPTGARILFRVVGVNIAGRSEPATLLQPVTIRES---GPSSG 111
Score = 104 bits (261), Expect = 2e-26
Identities = 24/136 (17%), Positives = 38/136 (27%), Gaps = 32/136 (23%)
Query: 1000 DVPGAPGAPKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDT 1059
AP D T+ + +L W P G I Y+VE L ++W+ A+ +
Sbjct: 7 GPTSAPQHLTVEDVTDTTTTLKWRPPDRIGAGGIDGYLVEYCLEGSEEWVPANKEPVERC 66
Query: 1060 SLKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPW 1119
V L FRV VN AG+
Sbjct: 67 GFT--------------------------------VKDLPTGARILFRVVGVNIAGRSEP 94
Query: 1120 SSSSDIIMCCAPPCAP 1135
++ + +
Sbjct: 95 ATLLQPVTIRESGPSS 110
Score = 92.8 bits (231), Expect = 3e-22
Identities = 31/133 (23%), Positives = 42/133 (31%), Gaps = 45/133 (33%)
Query: 1559 VDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEG 1618
D T+ + +L W P G I Y+VE
Sbjct: 18 EDVTDTTTTLKWRPPDRIGAGGIDGYLVEYC----------------------------- 48
Query: 1619 KSIGSERGSTAQFLEREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKS 1678
G W+ N V C F+V +L G FR++ VN G+S
Sbjct: 49 ----------------LEGSEEWVPANKEPVERCGFTVKDLPTGARILFRVVGVNIAGRS 92
Query: 1679 EPSICTTPVKICE 1691
EP+ PV I E
Sbjct: 93 EPATLLQPVTIRE 105
Score = 82.4 bits (204), Expect = 1e-18
Identities = 24/65 (36%), Positives = 33/65 (50%)
Query: 20 DCYIIERREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPSICTTP 79
D Y++E G W+ N V C F+V +L G FR++ VN G+SEP+ P
Sbjct: 41 DGYLVEYCLEGSEEWVPANKEPVERCGFTVKDLPTGARILFRVVGVNIAGRSEPATLLQP 100
Query: 80 VKICE 84
V I E
Sbjct: 101 VTIRE 105
Score = 51.6 bits (124), Expect = 9e-08
Identities = 20/107 (18%), Positives = 26/107 (24%), Gaps = 19/107 (17%)
Query: 1331 VPDPPGQPQIVDWDTNNATLMWDRPRTDGGSKIQGYKMLLKTPTGELPTTIWSKI--RPT 1388
P + D TL W P G I GY + + W P
Sbjct: 8 PTSAPQHLTVEDVTDTTTTLKWRPPDRIGAGGIDGYLVEYCLEG----SEEWVPANKEPV 63
Query: 1389 SSTVYC-KDTTMNSS------------NSEPGKQSGPVIVEEQPNKP 1422
+ KD + SEP PV + E
Sbjct: 64 ERCGFTVKDLPTGARILFRVVGVNIAGRSEPATLLQPVTIRESGPSS 110
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM;
2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4
PDB: 1ie5_A
Length = 291
Score = 126 bits (318), Expect = 6e-32
Identities = 43/220 (19%), Positives = 78/220 (35%), Gaps = 13/220 (5%)
Query: 454 AQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTIS 513
E G S A+ +V+I + +A C + PTI
Sbjct: 81 VTAEDGTQ--SEATVNVKIFQK-----LMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTII 133
Query: 514 WLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGG--VKSTKAELIIM 571
W R++ + L I + D Y C + ++I+
Sbjct: 134 WKHKGRDVILKKDVRFIVLSNN-YLQIRGIKKTDEGTYRCEGRILARGEINFKDIQVIVN 192
Query: 572 TAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVE--TSE 629
P + + G++V + G+P+P ++W +D E IE+ + S+
Sbjct: 193 VPPTVQARQSIVNA-TANLGQSVTLVCDADGFPEPTMSWTKDGEPIENEEEDDEKHIFSD 251
Query: 630 RHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQISDR 669
+ LTIR+ D A Y +AEN G A + +++ +
Sbjct: 252 DSSELTIRNVDKNDEAEYVCIAENKAGEQDASIHLKVFAK 291
Score = 118 bits (297), Expect = 5e-29
Identities = 38/202 (18%), Positives = 60/202 (29%), Gaps = 10/202 (4%)
Query: 479 KAPEIIVPLRNANAIQNHNAQFQCTITGCPK-PTISWLKGSREITPSARHHI---FAEGD 534
+ ++ + + F C + G K ISW + E + I + + D
Sbjct: 1 RVLQVDIVPSQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDD 60
Query: 535 TYTLIINSVYGVDADEYVCRAVNKGGVK-STKAELIIMTAPKFNVPPRFRDTAYFDKGEN 593
+ TL I + DA Y C + G + + I F P F +GE+
Sbjct: 61 SSTLTIYNANIDDAGIYKCVVTAEDGTQSEATVNVKIFQKLMFKNAPT---PQEFKEGED 117
Query: 594 VVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAPYRVVAEN 653
V+ P I W + + L IR D YR
Sbjct: 118 AVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLSNNY-LQIRGIKKTDEGTYRCEGRI 176
Query: 654 DLGMDSAIVKIQISDRPDPPQF 675
+ IQ+ PP
Sbjct: 177 LARGEINFKDIQVIVN-VPPTV 197
Score = 110 bits (276), Expect = 2e-26
Identities = 32/193 (16%), Positives = 63/193 (32%), Gaps = 7/193 (3%)
Query: 89 EKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRL 148
+K F G+ + C+ + P W GR++ R L
Sbjct: 99 QKLMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLSN-NYL 157
Query: 149 HFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIG--TPPRIDRMPNAL--YIPEGDNTKVK 204
+ D G Y CE +++ PP + + + G + +
Sbjct: 158 QIRGIKKTDEGTYRCEGRILARGEINFKDIQVIVNVPPTVQARQSIVNATANLGQSVTLV 217
Query: 205 IFYAGDQPMEVSLTKNGRVVQSDDRF--KFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSS 262
G +S TK+G +++++ K DD + I+ + K D +Y N +
Sbjct: 218 CDADGFPEPTMSWTKDGEPIENEEEDDEKHIFSDDSSELTIRNVDKNDEAEYVCIAENKA 277
Query: 263 GSVSGTFTINITG 275
G + + +
Sbjct: 278 GEQDASIHLKVFA 290
Score = 110 bits (276), Expect = 2e-26
Identities = 32/193 (16%), Positives = 63/193 (32%), Gaps = 7/193 (3%)
Query: 1696 EKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRL 1755
+K F G+ + C+ + P W GR++ R L
Sbjct: 99 QKLMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLSN-NYL 157
Query: 1756 HFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIG--TPPRIDRMPNAL--YIPEGDNTKVK 1811
+ D G Y CE +++ PP + + + G + +
Sbjct: 158 QIRGIKKTDEGTYRCEGRILARGEINFKDIQVIVNVPPTVQARQSIVNATANLGQSVTLV 217
Query: 1812 IFYAGDQPMEVSLTKNGRVVQSDDRF--KFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSS 1869
G +S TK+G +++++ K DD + I+ + K D +Y N +
Sbjct: 218 CDADGFPEPTMSWTKDGEPIENEEEDDEKHIFSDDSSELTIRNVDKNDEAEYVCIAENKA 277
Query: 1870 GSVSGTFTINITG 1882
G + + +
Sbjct: 278 GEQDASIHLKVFA 290
Score = 106 bits (265), Expect = 7e-25
Identities = 36/216 (16%), Positives = 61/216 (28%), Gaps = 10/216 (4%)
Query: 91 PDFIVPLKDLVVPLGKLLTLQCEATGTP-VPKCRWLRNGREISSGARYRVETAGGVFR-- 147
+ + +G+ C+ G W E S + R+
Sbjct: 3 LQVDIVPSQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSS 62
Query: 148 -LHFNEVTDVDNGDYTCEAYNSVGFAHTSS-RVKIGTPPRIDRMPNALYIPEGDNTKVKI 205
L D G Y C G ++ VKI P EG++ +
Sbjct: 63 TLTIYNANIDDAGIYKCVVTAEDGTQSEATVNVKIFQKLMFKNAPTPQEFKEGEDAVIVC 122
Query: 206 FYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSV 265
P + GR V +F VL + + I+ I+K D G Y +
Sbjct: 123 DVVSSLPPTIIWKHKGRDVILKKDVRFIVLSNN-YLQIRGIKKTDEGTYRCEGRILARGE 181
Query: 266 SGTFTINITGLPGPPI----GPLDVSEITKHTCTLH 297
I + P + ++ + + TL
Sbjct: 182 INFKDIQVIVNVPPTVQARQSIVNATANLGQSVTLV 217
Score = 106 bits (265), Expect = 7e-25
Identities = 36/216 (16%), Positives = 61/216 (28%), Gaps = 10/216 (4%)
Query: 1698 PDFIVPLKDLVVPLGKLLTLQCEATGTP-VPKCRWLRNGREISSGARYRVETAGGVFR-- 1754
+ + +G+ C+ G W E S + R+
Sbjct: 3 LQVDIVPSQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSS 62
Query: 1755 -LHFNEVTDVDNGDYTCEAYNSVGFAHTSS-RVKIGTPPRIDRMPNALYIPEGDNTKVKI 1812
L D G Y C G ++ VKI P EG++ +
Sbjct: 63 TLTIYNANIDDAGIYKCVVTAEDGTQSEATVNVKIFQKLMFKNAPTPQEFKEGEDAVIVC 122
Query: 1813 FYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSV 1872
P + GR V +F VL + + I+ I+K D G Y +
Sbjct: 123 DVVSSLPPTIIWKHKGRDVILKKDVRFIVLSNN-YLQIRGIKKTDEGTYRCEGRILARGE 181
Query: 1873 SGTFTINITGLPGPPI----GPLDVSEITKHTCTLH 1904
I + P + ++ + + TL
Sbjct: 182 INFKDIQVIVNVPPTVQARQSIVNATANLGQSVTLV 217
Score = 84.2 bits (208), Expect = 2e-17
Identities = 30/122 (24%), Positives = 43/122 (35%), Gaps = 10/122 (8%)
Query: 2061 AQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVP--LRNANAIQNHNAQFQCTITGCPKPT 2118
+ A + + V + P P + + NA A + C G P+PT
Sbjct: 174 GRILARGEI-NFKDIQVIVNVP-----PTVQARQSIVNATANLGQSVTLVCDADGFPEPT 227
Query: 2119 ISWLKGSREITPSARHHI--FAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELI 2176
+SW K I D+ L I +V D EYVC A NK G + L
Sbjct: 228 MSWTKDGEPIENEEEDDEKHIFSDDSSELTIRNVDKNDEAEYVCIAENKAGEQDASIHLK 287
Query: 2177 IM 2178
+
Sbjct: 288 VF 289
Score = 83.0 bits (205), Expect = 6e-17
Identities = 23/146 (15%), Positives = 39/146 (26%), Gaps = 10/146 (6%)
Query: 2061 AQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTIS 2120
E G S A+ +V+I + +A C + PTI
Sbjct: 81 VTAEDGTQ--SEATVNVKIFQK-----LMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTII 133
Query: 2121 WLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGG--VKSTKAELIIM 2178
W R++ + L I + D Y C + ++I+
Sbjct: 134 WKHKGRDVILKKDVRFIVLSNN-YLQIRGIKKTDEGTYRCEGRILARGEINFKDIQVIVN 192
Query: 2179 TAPKFNVPPRFRDTAYFESDVVVVVC 2204
P + V +VC
Sbjct: 193 VPPTVQARQSIVNATANLGQSVTLVC 218
Score = 76.5 bits (188), Expect = 8e-15
Identities = 25/124 (20%), Positives = 43/124 (34%), Gaps = 7/124 (5%)
Query: 2086 KAPEIIVPLRNANAIQNHNAQFQCTITGCPK-PTISWLKGSREITPSARHHI---FAEGD 2141
+ ++ + + F C + G K ISW + E + I + + D
Sbjct: 1 RVLQVDIVPSQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDD 60
Query: 2142 TYTLIINSVYGVDADEYVCRAVNKGGVK-STKAELIIMTAPKFNVPPRFRDTAYFESDVV 2200
+ TL I + DA Y C + G + + I F P + E +
Sbjct: 61 SSTLTIYNANIDDAGIYKCVVTAEDGTQSEATVNVKIFQKLMFKNAP--TPQEFKEGEDA 118
Query: 2201 VVVC 2204
V+VC
Sbjct: 119 VIVC 122
Score = 53.7 bits (129), Expect = 2e-07
Identities = 24/112 (21%), Positives = 47/112 (41%), Gaps = 3/112 (2%)
Query: 1400 NSSNSEPGKQSGPVIVEEQPNKPVMDLSGVRDITVKAGEDFSIHVPFMAFPQPAAFWFAN 1459
+ E + VIV P V + + T G+ ++ FP+P W +
Sbjct: 176 ILARGEINFKDIQVIVNVPP--TVQARQSIVNATANLGQSVTLVCDADGFPEPTMSWTKD 233
Query: 1460 DSIIDDSDTRVHKQ-LTMNSASLVVKNSQRSDGGQYRLQLKNPAGFDTATLH 1510
I++ + K + +S+ L ++N ++D +Y +N AG A++H
Sbjct: 234 GEPIENEEEDDEKHIFSDDSSELTIRNVDKNDEAEYVCIAENKAGEQDASIH 285
Score = 53.3 bits (128), Expect = 3e-07
Identities = 22/100 (22%), Positives = 37/100 (37%), Gaps = 5/100 (5%)
Query: 1134 APKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIK---FETSEN 1190
P + + SI + T G+ T+ G P+PT WT +G+ + + + ++
Sbjct: 194 PPTVQARQSIVNATANLGQSVTLVCDADGFPEPTMSWTKDGEPIENEEEDDEKHIFSDDS 253
Query: 1191 QTIYRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYVVDK 1230
+ K D Y N G AS + V K
Sbjct: 254 SELTIRNVDK--NDEAEYVCIAENKAGEQDASIHLKVFAK 291
Score = 53.0 bits (127), Expect = 5e-07
Identities = 22/111 (19%), Positives = 39/111 (35%), Gaps = 3/111 (2%)
Query: 1135 PKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQTIY 1194
K+ + GE+ I PT IW G +V ++F N +
Sbjct: 99 QKLMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLSNNYL- 157
Query: 1195 RNKSAKRATDSGSYTIQLVNTVGSDSASCKVYV-VDKPSPPQGPLDVSDIT 1244
+ + K+ TD G+Y + + + V V+ P Q + + T
Sbjct: 158 QIRGIKK-TDEGTYRCEGRILARGEINFKDIQVIVNVPPTVQARQSIVNAT 207
Score = 49.5 bits (118), Expect = 6e-06
Identities = 31/188 (16%), Positives = 58/188 (30%), Gaps = 25/188 (13%)
Query: 1324 TAKFPFTVPDPPGQPQIVDW-DTNNATLMWDRPRTDGGSKIQGYKMLLKTPTGELPTTIW 1382
+ F V I W N L ++ R + + L TI
Sbjct: 19 SKFFLCQVAGDAKDKDIS-WFSPNGEKLSPNQQRI--------SVVWNDDDSSTL--TI- 66
Query: 1383 SKIRPTSSTVY-CKDTTMNSSNSEPGKQSGPVIVEEQPNKPVMDLSGVRDITVKAGEDFS 1441
+ +Y C + + + V V+ +M + K GED
Sbjct: 67 YNANIDDAGIYKCV-----VTAEDGTQSEATVNVKIFQ--KLMFKNAPTPQEFKEGEDAV 119
Query: 1442 IHVPFMAFPQPAAFWFANDS-IIDDSDTRVHKQLTMNSASLVVKNSQRSDGGQYRLQLKN 1500
I ++ P W +I D R +++ L ++ +++D G YR + +
Sbjct: 120 IVCDVVSSLPPTIIWKHKGRDVILKKDVRFI---VLSNNYLQIRGIKKTDEGTYRCEGRI 176
Query: 1501 PAGFDTAT 1508
A +
Sbjct: 177 LARGEINF 184
Score = 40.2 bits (94), Expect = 0.006
Identities = 22/106 (20%), Positives = 36/106 (33%), Gaps = 12/106 (11%)
Query: 1144 RDMTVLAGEEFTITVPFSGRPKPTPI-WT-VNGDEVSP-DGRIKFETSENQT----IYRN 1196
+ GE +G K I W NG+++SP RI +++ + IY
Sbjct: 10 SQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYN- 68
Query: 1197 KSAKRATDSGSYTIQLVNTVGSD-SASCKVYVVDKPSPPQGPLDVS 1241
D+G Y + G+ A+ V + K P
Sbjct: 69 ---ANIDDAGIYKCVVTAEDGTQSEATVNVKIFQKLMFKNAPTPQE 111
Score = 39.9 bits (93), Expect = 0.008
Identities = 13/77 (16%), Positives = 25/77 (32%), Gaps = 3/77 (3%)
Query: 1430 RDITVKAGEDFSIHVPFMAFPQPAAF-WF-ANDSIIDDSDTRVH-KQLTMNSASLVVKNS 1486
+ GE + WF N + + R+ +S++L + N+
Sbjct: 10 SQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNA 69
Query: 1487 QRSDGGQYRLQLKNPAG 1503
D G Y+ + G
Sbjct: 70 NIDDAGIYKCVVTAEDG 86
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila
melanogaster} PDB: 3pxj_A
Length = 212
Score = 123 bits (311), Expect = 8e-32
Identities = 50/211 (23%), Positives = 73/211 (34%), Gaps = 18/211 (8%)
Query: 478 AKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHH--IFAEGDT 535
A PEII +N A F C G P P+I W K ++++ + + + G
Sbjct: 4 AHPPEIIRKPQNQGVRVGGVASFYCAARGDPPPSIVWRKNGKKVSGTQSRYTVLEQPGGI 63
Query: 536 YTLIINSVYGV-DADEYVCRAVNK-GGVKSTKAELIIMT-------APKFNVPPRFRDTA 586
L I V D Y C A N G S A L I P P R
Sbjct: 64 SILRIEPVRAGRDDAPYECVAENGVGDAVSADATLTIYEGDKTPAGFPVITQGPGTRVIE 123
Query: 587 YFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAP 646
G V++ G P P I W ++ ++ + L I ++ D
Sbjct: 124 ---VGHTVLMTCKAIGNPTPNIYWIKNQTKVDMSNPRYSLKD---GFLQIENSREEDQGK 177
Query: 647 YRVVAENDLGMD-SAIVKIQISDRPDPPQFP 676
Y VAEN +G + S + + R +
Sbjct: 178 YECVAENSMGTEHSKATNLYVKVRRVGTKHH 208
Score = 114 bits (288), Expect = 1e-28
Identities = 47/195 (24%), Positives = 73/195 (37%), Gaps = 18/195 (9%)
Query: 87 GGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREIS-SGARYRVETAGGV 145
G P+ I ++ V +G + + C A G P P W +NG+++S + +RY V G
Sbjct: 3 GAHPPEIIRKPQNQGVRVGGVASFYCAARGDPPPSIVWRKNGKKVSGTQSRYTVLEQPGG 62
Query: 146 FRLHFNEVTDV----DNGDYTCEAYNSVGFAHTSS--------RVKIGTPPRIDRMPNAL 193
+ + V D+ Y C A N VG A ++ P I + P
Sbjct: 63 --ISILRIEPVRAGRDDAPYECVAENGVGDAVSADATLTIYEGDKTPAGFPVITQGPGTR 120
Query: 194 YIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGD 253
I G + G+ + KN V + L D + I+ R+ED G
Sbjct: 121 VIEVGHTVLMTCKAIGNPTPNIYWIKNQTKVDMSNPRY--SLKDGFLQ-IENSREEDQGK 177
Query: 254 YTVNLSNSSGSVSGT 268
Y NS G+
Sbjct: 178 YECVAENSMGTEHSK 192
Score = 114 bits (288), Expect = 1e-28
Identities = 47/195 (24%), Positives = 73/195 (37%), Gaps = 18/195 (9%)
Query: 1694 GGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREIS-SGARYRVETAGGV 1752
G P+ I ++ V +G + + C A G P P W +NG+++S + +RY V G
Sbjct: 3 GAHPPEIIRKPQNQGVRVGGVASFYCAARGDPPPSIVWRKNGKKVSGTQSRYTVLEQPGG 62
Query: 1753 FRLHFNEVTDV----DNGDYTCEAYNSVGFAHTSS--------RVKIGTPPRIDRMPNAL 1800
+ + V D+ Y C A N VG A ++ P I + P
Sbjct: 63 --ISILRIEPVRAGRDDAPYECVAENGVGDAVSADATLTIYEGDKTPAGFPVITQGPGTR 120
Query: 1801 YIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGD 1860
I G + G+ + KN V + L D + I+ R+ED G
Sbjct: 121 VIEVGHTVLMTCKAIGNPTPNIYWIKNQTKVDMSNPRY--SLKDGFLQ-IENSREEDQGK 177
Query: 1861 YTVNLSNSSGSVSGT 1875
Y NS G+
Sbjct: 178 YECVAENSMGTEHSK 192
Score = 106 bits (265), Expect = 1e-25
Identities = 28/128 (21%), Positives = 43/128 (33%), Gaps = 4/128 (3%)
Query: 454 AQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTIS 513
A+N G ++ + A+ ++ D A P I H C G P P I
Sbjct: 84 AENGVGDAVSADATLTIYEGDKTPAGFPVITQGPGTRVIEVGHTVLMTCKAIGNPTPNIY 143
Query: 514 WLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGG-VKSTKAELIIMT 572
W+K ++ S + +G L I + D +Y C A N G S L +
Sbjct: 144 WIKNQTKVDMSNPRYSLKDG---FLQIENSREEDQGKYECVAENSMGTEHSKATNLYVKV 200
Query: 573 APKFNVPP 580
Sbjct: 201 RRVGTKHH 208
Score = 106 bits (265), Expect = 1e-25
Identities = 28/128 (21%), Positives = 43/128 (33%), Gaps = 4/128 (3%)
Query: 2061 AQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTIS 2120
A+N G ++ + A+ ++ D A P I H C G P P I
Sbjct: 84 AENGVGDAVSADATLTIYEGDKTPAGFPVITQGPGTRVIEVGHTVLMTCKAIGNPTPNIY 143
Query: 2121 WLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGG-VKSTKAELIIMT 2179
W+K ++ S + +G L I + D +Y C A N G S L +
Sbjct: 144 WIKNQTKVDMSNPRYSLKDG---FLQIENSREEDQGKYECVAENSMGTEHSKATNLYVKV 200
Query: 2180 APKFNVPP 2187
Sbjct: 201 RRVGTKHH 208
Score = 91.0 bits (226), Expect = 2e-20
Identities = 25/129 (19%), Positives = 47/129 (36%), Gaps = 4/129 (3%)
Query: 63 IAVNAIGKSEPSICTTPVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKC 122
+A N +G + + T + + P V+ +G + + C+A G P P
Sbjct: 83 VAENGVGDAVSADATLTIYEGDKTPAGFPVITQGPGTRVIEVGHTVLMTCKAIGNPTPNI 142
Query: 123 RWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSS-RVKIG 181
W++N ++ G L + D G Y C A NS+G H+ + + +
Sbjct: 143 YWIKNQTKVDMSNPRYSLKDGF---LQIENSREEDQGKYECVAENSMGTEHSKATNLYVK 199
Query: 182 TPPRIDRMP 190
+
Sbjct: 200 VRRVGTKHH 208
Score = 91.0 bits (226), Expect = 2e-20
Identities = 25/129 (19%), Positives = 47/129 (36%), Gaps = 4/129 (3%)
Query: 1670 IAVNAIGKSEPSICTTPVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKC 1729
+A N +G + + T + + P V+ +G + + C+A G P P
Sbjct: 83 VAENGVGDAVSADATLTIYEGDKTPAGFPVITQGPGTRVIEVGHTVLMTCKAIGNPTPNI 142
Query: 1730 RWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSS-RVKIG 1788
W++N ++ G L + D G Y C A NS+G H+ + + +
Sbjct: 143 YWIKNQTKVDMSNPRYSLKDGF---LQIENSREEDQGKYECVAENSMGTEHSKATNLYVK 199
Query: 1789 TPPRIDRMP 1797
+
Sbjct: 200 VRRVGTKHH 208
Score = 78.3 bits (193), Expect = 5e-16
Identities = 33/124 (26%), Positives = 43/124 (34%), Gaps = 8/124 (6%)
Query: 2085 AKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHH--IFAEGDT 2142
A PEII +N A F C G P P+I W K ++++ + + + G
Sbjct: 4 AHPPEIIRKPQNQGVRVGGVASFYCAARGDPPPSIVWRKNGKKVSGTQSRYTVLEQPGGI 63
Query: 2143 YTLIINSVYGV-DADEYVCRAVNK-GGVKSTKAELIIMTAPK-FNVPPRFRDTAYFESDV 2199
L I V D Y C A N G S A L I K P
Sbjct: 64 SILRIEPVRAGRDDAPYECVAENGVGDAVSADATLTIYEGDKTPAGFPVITQG---PGTR 120
Query: 2200 VVVV 2203
V+ V
Sbjct: 121 VIEV 124
Score = 60.6 bits (147), Expect = 5e-10
Identities = 26/137 (18%), Positives = 40/137 (29%), Gaps = 12/137 (8%)
Query: 1108 VC-AVNAAGQGPWSSSSDII---MCCAPPCAPKITSDLSIRDMTVLAGEEFTITVPFSGR 1163
C A N G S+ + + P P IT + G +T G
Sbjct: 81 ECVAENGVGD-AVSADATLTIYEGDKTPAGFPVITQGPG--TRVIEVGHTVLMTCKAIGN 137
Query: 1164 PKPTPIWTVNGDEVSPDGRIKFETSENQTIYRNKSAKRATDSGSYTIQLVNTVGSDSASC 1223
P P W N +V I R D G Y N++G++ +
Sbjct: 138 PTPNIYWIKNQTKVDMSNPRYSLKDGFLQIEN----SREEDQGKYECVAENSMGTEHSKA 193
Query: 1224 -KVYVVDKPSPPQGPLD 1239
+YV + +
Sbjct: 194 TNLYVKVRRVGTKHHHH 210
Score = 56.7 bits (137), Expect = 1e-08
Identities = 25/115 (21%), Positives = 42/115 (36%), Gaps = 21/115 (18%)
Query: 1430 RDITVKAGEDFSIHVPFMAFPQPAAFWFANDSIIDDSDTRVHKQLTMNSASLVVKNSQRS 1489
++ G + + P P +W N + +D S+ R ++ L ++NS+
Sbjct: 118 GTRVIEVGHTVLMTCKAIGNPTPNIYWIKNQTKVDMSNPRY----SLKDGFLQIENSREE 173
Query: 1490 DGGQYRLQLKNPAGFDTATLHSRLRTLPDSVNPRCHLPSSTSKERPKFPTHPNHQ 1544
D G+Y +N G T HS+ L V K R H +H
Sbjct: 174 DQGKYECVAENSMG----TEHSKATNL--YV-----------KVRRVGTKHHHHH 211
Score = 56.3 bits (136), Expect = 1e-08
Identities = 24/107 (22%), Positives = 38/107 (35%), Gaps = 5/107 (4%)
Query: 1134 APKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSP-DGRIKFETSENQ- 1191
P+I ++ V G + G P P+ +W NG +VS R
Sbjct: 6 PPEIIR--KPQNQGVRVGGVASFYCAARGDPPPSIVWRKNGKKVSGTQSRYTVLEQPGGI 63
Query: 1192 TIYRNKSAKRATDSGSYTIQLVNTVG-SDSASCKVYVVDKPSPPQGP 1237
+I R + + D Y N VG + SA + + + P G
Sbjct: 64 SILRIEPVRAGRDDAPYECVAENGVGDAVSADATLTIYEGDKTPAGF 110
Score = 34.4 bits (79), Expect = 0.25
Identities = 13/76 (17%), Positives = 24/76 (31%), Gaps = 2/76 (2%)
Query: 1430 RDITVKAGEDFSIHVPFMAFPQPAAFWFANDSIIDDSDTRVHKQLTMNSASL--VVKNSQ 1487
++ V+ G S + P P+ W N + + +R S+ +
Sbjct: 14 QNQGVRVGGVASFYCAARGDPPPSIVWRKNGKKVSGTQSRYTVLEQPGGISILRIEPVRA 73
Query: 1488 RSDGGQYRLQLKNPAG 1503
D Y +N G
Sbjct: 74 GRDDAPYECVAENGVG 89
>2yuw_A Myosin binding protein C, SLOW type; fibronectin III domain, SLOW-
type protein, structural genomics, NPPSFA; NMR {Homo
sapiens}
Length = 110
Score = 118 bits (299), Expect = 2e-31
Identities = 28/101 (27%), Positives = 41/101 (40%), Gaps = 2/101 (1%)
Query: 667 SDRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSWIRV--GNTRF 724
S PP TV+ + ++ + WR P G + + Y++E WI
Sbjct: 5 SSGTSPPTLLTVDSVTDTTVTMRWRPPDHIGAAGLDGYVLEYCFEGTEDWIVANKDLIDK 64
Query: 725 TTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKDT 765
T ITGL + RV A N G S+P S I K++
Sbjct: 65 TKFTITGLPTDAKIFVRVKAVNAAGASEPKYYSQPILVKES 105
Score = 116 bits (292), Expect = 1e-30
Identities = 27/105 (25%), Positives = 42/105 (40%)
Query: 371 AKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVA 430
S SPP + V V V + W P G + + GY ++ G++ W N
Sbjct: 1 GSSGSSGTSPPTLLTVDSVTDTTVTMRWRPPDHIGAAGLDGYVLEYCFEGTEDWIVANKD 60
Query: 431 ICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDP 475
+ ++ I L + RV A N AG S P S + +K+
Sbjct: 61 LIDKTKFTITGLPTDAKIFVRVKAVNAAGASEPKYYSQPILVKES 105
Score = 116 bits (292), Expect = 1e-30
Identities = 27/105 (25%), Positives = 42/105 (40%)
Query: 1978 AKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVA 2037
S SPP + V V V + W P G + + GY ++ G++ W N
Sbjct: 1 GSSGSSGTSPPTLLTVDSVTDTTVTMRWRPPDHIGAAGLDGYVLEYCFEGTEDWIVANKD 60
Query: 2038 ICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDP 2082
+ ++ I L + RV A N AG S P S + +K+
Sbjct: 61 LIDKTKFTITGLPTDAKIFVRVKAVNAAGASEPKYYSQPILVKES 105
Score = 111 bits (279), Expect = 8e-29
Identities = 29/107 (27%), Positives = 44/107 (41%), Gaps = 5/107 (4%)
Query: 1231 PSPPQGPLDVSDITPESCSLSWKPPLDDGGSPITNYVVEKYESATGFWSKLSSF-VRSPA 1289
SPP L V +T + ++ W+PP G + + YV+E T W + +
Sbjct: 8 TSPP-TLLTVDSVTDTTVTMRWRPPDHIGAAGLDGYVLEYCFEGTEDWIVANKDLIDKTK 66
Query: 1290 YDVFGLETNRQYRFRVRAENQYGVSEPLELDNSITAKFPFTVPDPPG 1336
+ + GL T+ + RV+A N G SEP I K G
Sbjct: 67 FTITGLPTDAKIFVRVKAVNAAGASEPKYYSQPILVKES---GPSSG 110
Score = 107 bits (269), Expect = 2e-27
Identities = 30/107 (28%), Positives = 37/107 (34%), Gaps = 5/107 (4%)
Query: 277 PGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWI-CISTTCHDTT 335
PP L V +T T T+ W PP + G + YV+E WI T
Sbjct: 8 TSPP-TLLTVDSVTDTTVTMRWRPPDHIGAAGLDGYVLEYCFEGTEDWIVANKDLIDKTK 66
Query: 336 FIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPG 382
F + GL + V AVN G P PI K G
Sbjct: 67 FTITGLPTDAKIFVRVKAVNAAGASEPKYYSQPILVKESGP---SSG 110
Score = 107 bits (269), Expect = 2e-27
Identities = 30/107 (28%), Positives = 37/107 (34%), Gaps = 5/107 (4%)
Query: 1884 PGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWI-CISTTCHDTT 1942
PP L V +T T T+ W PP + G + YV+E WI T
Sbjct: 8 TSPP-TLLTVDSVTDTTVTMRWRPPDHIGAAGLDGYVLEYCFEGTEDWIVANKDLIDKTK 66
Query: 1943 FIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPG 1989
F + GL + V AVN G P PI K G
Sbjct: 67 FTITGLPTDAKIFVRVKAVNAAGASEPKYYSQPILVKESGP---SSG 110
Score = 107 bits (268), Expect = 3e-27
Identities = 25/103 (24%), Positives = 37/103 (35%), Gaps = 1/103 (0%)
Query: 902 PHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTKVSSY-VTTPFV 960
PP L D ++T+ W PP G + + YV+E + W + +
Sbjct: 8 TSPPTLLTVDSVTDTTVTMRWRPPDHIGAAGLDGYVLEYCFEGTEDWIVANKDLIDKTKF 67
Query: 961 RVRNLAIGSTYEFRVMAENQYGLSKPALTIDPIKAKHPFDVPG 1003
+ L + RV A N G S+P PI K G
Sbjct: 68 TITGLPTDAKIFVRVKAVNAAGASEPKYYSQPILVKESGPSSG 110
Score = 104 bits (261), Expect = 3e-26
Identities = 25/138 (18%), Positives = 40/138 (28%), Gaps = 32/138 (23%)
Query: 995 AKHPFDVPGAPGAPKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMA 1054
P T+ ++++ W P H G + + Y++E + WI A+
Sbjct: 1 GSSGSSGTSPPTLLTVDSVTDTTVTMRWRPPDHIGAAGLDGYVLEYCFEGTEDWIVANKD 60
Query: 1055 HIPDTSLKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAA 1114
I T +T L + + RV AVNAA
Sbjct: 61 LIDKTKF--------------------------------TITGLPTDAKIFVRVKAVNAA 88
Query: 1115 GQGPWSSSSDIIMCCAPP 1132
G S I+
Sbjct: 89 GASEPKYYSQPILVKESG 106
Score = 90.9 bits (226), Expect = 1e-21
Identities = 23/133 (17%), Positives = 41/133 (30%), Gaps = 45/133 (33%)
Query: 1559 VDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEG 1618
T+ ++++ W P H G + + Y++E
Sbjct: 17 DSVTDTTVTMRWRPPDHIGAAGLDGYVLEYC----------------------------- 47
Query: 1619 KSIGSERGSTAQFLEREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKS 1678
G W+ N + + F++ L R+ AVNA G S
Sbjct: 48 ----------------FEGTEDWIVANKDLIDKTKFTITGLPTDAKIFVRVKAVNAAGAS 91
Query: 1679 EPSICTTPVKICE 1691
EP + P+ + E
Sbjct: 92 EPKYYSQPILVKE 104
Score = 80.5 bits (199), Expect = 6e-18
Identities = 19/65 (29%), Positives = 30/65 (46%)
Query: 20 DCYIIERREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPSICTTP 79
D Y++E G W+ N + + F++ L R+ AVNA G SEP + P
Sbjct: 40 DGYVLEYCFEGTEDWIVANKDLIDKTKFTITGLPTDAKIFVRVKAVNAAGASEPKYYSQP 99
Query: 80 VKICE 84
+ + E
Sbjct: 100 ILVKE 104
Score = 54.7 bits (132), Expect = 6e-09
Identities = 18/108 (16%), Positives = 30/108 (27%), Gaps = 19/108 (17%)
Query: 1325 AKFPFTVPDPPGQPQIVDWDTNNATLMWDRPRTDGGSKIQGYKMLLKTPTGELPTTIWSK 1384
+ PP + T+ W P G + + GY + T W
Sbjct: 1 GSSGSSGTSPPTLLTVDSVTDTTVTMRWRPPDHIGAAGLDGYVLEYCFE----GTEDWIV 56
Query: 1385 I--RPTSSTVYC-KDTTMNSS------------NSEPGKQSGPVIVEE 1417
T + ++ SEP S P++V+E
Sbjct: 57 ANKDLIDKTKFTITGLPTDAKIFVRVKAVNAAGASEPKYYSQPILVKE 104
>3e0g_A Leukemia inhibitory factor receptor; IG domain, cytokine binding
homology region (CHR), cell MEMB disease mutation,
glycoprotein, membrane; HET: NAG MAN FUC; 3.10A {Homo
sapiens}
Length = 483
Score = 129 bits (326), Expect = 2e-31
Identities = 72/488 (14%), Positives = 143/488 (29%), Gaps = 65/488 (13%)
Query: 917 SLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTKVSSYVTTPFVRVRNLAIGSTYEFRVM 976
W P G +E++ S + +S ++ L+ G YE +
Sbjct: 11 VWQCSWKAPSGTGRGTDYEVCIEQRS-RSCYQLEKTSI------KIPALSHG-DYEITIN 62
Query: 977 AENQYGLSKPALTIDPIKAKHPFDVPGAPGAPK-GVDSTEDSISLVWSKPR--HDGGSPI 1033
+ + +G S T++ ++ +P P + D + ++ L W+ S +
Sbjct: 63 SLHDFGSSTSKFTLNE---QNVSLIPDTPEILQLSADFSTSTLYLKWNDRGSVFPHRSNV 119
Query: 1034 QRYIVEKRLISDDKWIK---ASMAHIPDTSLKYVLWVSEGKSIGSERGSTAQFLELLLMF 1090
+ ++ + +K +L + W S+ + L
Sbjct: 120 I-WEIKVLRKESMELVKLVTHQTTLNGKDTLHHWSWASD--------------MPLECAI 164
Query: 1091 IPNRVTSLIENHEYEFRVCAVNAAGQGPWSSSSDIIMCCAPPCAPKITSDLSIRDMTVLA 1150
+ I+N + G WS S + P + + +D +L
Sbjct: 165 HFVEIRCYIDNLHFS---------GLEEWSDWSPVK---QISWIPDSQTKVFPQDKVILV 212
Query: 1151 GEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQTIYRNKSAKRATDSGSYTI 1210
G + T + I N + DG N + S S
Sbjct: 213 GSDITFCCVSQEKVLSALIGHTNCPLIHLDGENVAIKIRN-----------ISVSASSGT 261
Query: 1211 QLVNTVGSDSASCKVYVVDKPSPPQGPLDVSDITPESCSLSWKPPLDDG--GSPITNYVV 1268
+V T + ++ P PQ L+ + SW P G T+Y +
Sbjct: 262 NVVFTTEDNIFGTVIFAGYPPDTPQQ-LNCETHDLKEIICSWNPGRVTALVGPRATSYTL 320
Query: 1269 EKYESATGFWSKLSSFVRSPAYDVF--GLETNRQYRFRVRAENQYGVSEPLELDNSITAK 1326
+ S K + + +Y + L Y F + A N G S+ +
Sbjct: 321 VESFSGKYVRLKRAEAPTNESYQLLFQMLPNQEIYNFTLNAHNPLGRSQS----TILVNI 376
Query: 1327 FPFTVPDPPGQPQIVDWDTNNATLMWDRPRTDGGSKIQGYKMLLKTPTGELPTTIWSKIR 1386
P P ++ D ++ L W P + ++ +K +
Sbjct: 377 TEKVYPHTPTSFKVKDINSTAVKLSWHLP-GNFAKINFLCEIEIKKSNSVQEQRNVTIQG 435
Query: 1387 PTSSTVYC 1394
+S+
Sbjct: 436 VENSSYLV 443
Score = 114 bits (286), Expect = 2e-26
Identities = 69/496 (13%), Positives = 141/496 (28%), Gaps = 54/496 (10%)
Query: 293 TCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHDTTFIVQGLTEGQEYLFHVM 352
C+ W P G +E+R T+ + L+ G Y +
Sbjct: 13 QCS--WKAPSGTGRGTDYEVCIEQRS-------RSCYQLEKTSIKIPALSHGD-YEITIN 62
Query: 353 AVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVT-QVGGDFVNLSW--DKPLDDGGSRI 409
++++ G +N ++ P P I ++ + L W + S +
Sbjct: 63 SLHDFGSSTSKFTLNE---QNVSLIPDTPEILQLSADFSTSTLYLKWNDRGSVFPHRSNV 119
Query: 410 QGYWIDKHEVGSDAWQRVNVA-------ICAPSQINIPNLIEGRQYEFRVYAQ-NEAGLS 461
+ + + V +E + + + S
Sbjct: 120 IWEIKVLRKESMELVKLVTHQTTLNGKDTLHHWSWASDMPLECAIHFVEIRCYIDNLHFS 179
Query: 462 LPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREI 521
S+ +K + V ++ + + F C + I
Sbjct: 180 GLEEWSDWSPVKQISWIPDSQTKVFPQDKVILVGSDITFCCVSQEKVLSALIGHTNCPLI 239
Query: 522 TPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPR 581
+ I ++ + V + P + P +
Sbjct: 240 HLDGE--------NVAIKIRNI--SVSASSGTNVVFTTEDNIFGTVIFAGYPP--DTPQQ 287
Query: 582 FRDTAYFDKGENVVVKI---PFTGYPKPKITWYRDNEVIESGGHFHVETSERHA----IL 634
+ ++ T P+ T Y E SG + ++ +E L
Sbjct: 288 L--NCETHDLKEIICSWNPGRVTALVGPRATSYTLVES-FSGKYVRLKRAEAPTNESYQL 344
Query: 635 TIRDASNVDTAPYRVVAENDLGMDSAIVKIQISDR--PDPPQFPTVEDIGHDSLALVWRA 692
+ N + + + A N LG + + + I+++ P P V+DI ++ L W
Sbjct: 345 LFQMLPNQEIYNFTLNAHNPLGRSQSTILVNITEKVYPHTPTSFKVKDINSTAVKLSWHL 404
Query: 693 PIWDGGSNITNYIVEKREHPMSSW----IRVGNTRFTTMAITGLSPGHQYEFRVYA--EN 746
P N I K+ + + I+ +A+ L+P Y FR+ E
Sbjct: 405 PGNFAKINFLCEIEIKKSNSVQEQRNVTIQGVENSSYLVALDKLNPYTLYTFRIRCSTET 464
Query: 747 VYGRSDPSTTSDLITT 762
+ S S +TT
Sbjct: 465 FWKWSKWSNKKQHLTT 480
Score = 105 bits (262), Expect = 2e-23
Identities = 69/491 (14%), Positives = 119/491 (24%), Gaps = 69/491 (14%)
Query: 21 CYIIERREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPSICTTPV 80
IE+R C L+ DYE I +++ G S
Sbjct: 29 EVCIEQR------SRSCYQLEKTSIKIPALSH---GDYEITINSLHDFGSSTSKFTLNEQ 79
Query: 81 KICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVE 140
+ PD L+ L L+ G+ P + ++ R E
Sbjct: 80 NVS-----LIPDTPEILQLSADFSTSTLYLKWNDRGSVFPHRSNVIWEIKVL-----RKE 129
Query: 141 TAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMPNALY------ 194
+ V + + + + + + V+I
Sbjct: 130 SMELVKLVTHQTTLNGKDTLHHWSWASDMPLECAIHFVEIRCYIDNLHFSGLEEWSDWSP 189
Query: 195 --------------------IPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTV 234
I G + + N ++ D
Sbjct: 190 VKQISWIPDSQTKVFPQDKVILVGSDITFCCVSQEKVLSALIGHTNCPLIHLDGENVAIK 249
Query: 235 LDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTC 294
+ + + N+ ++ I P P L+
Sbjct: 250 IRNISVS----------ASSGTNVVFTTEDNIFGTVIFAGYPPDTPQQ-LNCETHDLKEI 298
Query: 295 TLHWNPPKYDG--GLKVTHYVVERRDI--SMPHWICISTTCHDTTFIVQGLTEGQEYLFH 350
WNP + G + T Y + + + T + Q L + Y F
Sbjct: 299 ICSWNPGRVTALVGPRATSYTLVESFSGKYVRLKRAEAPTNESYQLLFQMLPNQEIYNFT 358
Query: 351 VMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQ 410
+ A N G +N + P P V + V LSW P +
Sbjct: 359 LNAHNPLGRSQSTILVNI----TEKVYPHTPTSFKVKDINSTAVKLSWHLP-GNFAKINF 413
Query: 411 GYWIDKHEVGSDAWQRVNVAICAPS---QINIPNLIEGRQYEFRVYAQNEAGLSLPSSAS 467
I+ + S QR + + + L Y FR+ E S S
Sbjct: 414 LCEIEIKKSNSVQEQRNVTIQGVENSSYLVALDKLNPYTLYTFRIRCSTE-TFWKWSKWS 472
Query: 468 NSVQIKDPMAA 478
N Q A+
Sbjct: 473 NKKQHLTTEAS 483
Score = 103 bits (257), Expect = 1e-22
Identities = 66/478 (13%), Positives = 115/478 (24%), Gaps = 63/478 (13%)
Query: 1641 WLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPSICTTPVKICEFVGGEKPDF 1700
C L+ DYE I +++ G S + PD
Sbjct: 36 SRSCYQLEKTSIKIPALSH---GDYEITINSLHDFGSSTSKFTLNEQNVS-----LIPDT 87
Query: 1701 IVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEV 1760
L+ L L+ G+ P + ++ R E+ V +
Sbjct: 88 PEILQLSADFSTSTLYLKWNDRGSVFPHRSNVIWEIKVL-----RKESMELVKLVTHQTT 142
Query: 1761 TDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMPNALY------------------- 1801
+ + + + + V+I
Sbjct: 143 LNGKDTLHHWSWASDMPLECAIHFVEIRCYIDNLHFSGLEEWSDWSPVKQISWIPDSQTK 202
Query: 1802 -------IPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIR 1854
I G + + N ++ D + + +
Sbjct: 203 VFPQDKVILVGSDITFCCVSQEKVLSALIGHTNCPLIHLDGENVAIKIRNISVS------ 256
Query: 1855 KEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDG-- 1912
N+ ++ I P P L+ WNP +
Sbjct: 257 ----ASSGTNVVFTTEDNIFGTVIFAGYPPDTPQQ-LNCETHDLKEIICSWNPGRVTALV 311
Query: 1913 GLKVTHYVVERRDI--SMPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPL 1970
G + T Y + + + T + Q L + Y F + A N G
Sbjct: 312 GPRATSYTLVESFSGKYVRLKRAEAPTNESYQLLFQMLPNQEIYNFTLNAHNPLGRSQST 371
Query: 1971 EGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDA 2030
+N + P P V + V LSW P + I+ + S
Sbjct: 372 ILVNI----TEKVYPHTPTSFKVKDINSTAVKLSWHLP-GNFAKINFLCEIEIKKSNSVQ 426
Query: 2031 WQRVNVAICAPS---QINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAA 2085
QR + + + L Y FR+ E S SN Q A+
Sbjct: 427 EQRNVTIQGVENSSYLVALDKLNPYTLYTFRIRCSTE-TFWKWSKWSNKKQHLTTEAS 483
Score = 85.3 bits (210), Expect = 6e-17
Identities = 38/231 (16%), Positives = 68/231 (29%), Gaps = 39/231 (16%)
Query: 898 VLDRPHPPENLHADEFAGDSLTLYWTPPRDNG--GSEITNYVVEKKDYNSTVWTKVSSYV 955
P P+ L+ + + W P R G T+Y + + V K +
Sbjct: 278 AGYPPDTPQQLNCETHDLKEIICSWNPGRVTALVGPRATSYTLVESFSGKYVRLKRAEAP 337
Query: 956 T--TPFVRVRNLAIGSTYEFRVMAENQYGLSKPALTIDPIKAKHPFDVPGAPGAPKGVDS 1013
T + + + L Y F + A N G S+ + ++ P P + K D
Sbjct: 338 TNESYQLLFQMLPNQEIYNFTLNAHNPLGRSQSTILVNIT----EKVYPHTPTSFKVKDI 393
Query: 1014 TEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEGKSI 1073
++ L W P + I K+ S + ++ + ++S L
Sbjct: 394 NSTAVKLSWHLPGNFAKINFLCEIEIKKSNSVQEQRNVTIQGVENSSYLVAL-------- 445
Query: 1074 GSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPWSSSSD 1124
L Y FR+ + WS S+
Sbjct: 446 ----------------------DKLNPYTLYTFRI-RCSTETFWKWSKWSN 473
Score = 78.3 bits (192), Expect = 1e-14
Identities = 50/390 (12%), Positives = 99/390 (25%), Gaps = 47/390 (12%)
Query: 393 FVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRV 452
SW P G I++ +Q + I IP L G YE +
Sbjct: 11 VWQCSWKAPSGTGRGTDYEVCIEQRS--RSCYQ------LEKTSIKIPALSHG-DYEITI 61
Query: 453 YAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTI 512
+ ++ G S N + PEI L+ + + G P
Sbjct: 62 NSLHDFGSSTSKFTLNEQNVSLIPD--TPEI---LQLSADFSTSTLYLKWNDRGSVFPHR 116
Query: 513 SWLKGSREITPSARHHIFAEGDTYTLI----------INSVYGVDADEYVCR---AVNKG 559
S + ++ + T + S ++ + ++
Sbjct: 117 SNVIWEIKVLRKESMELVKLVTHQTTLNGKDTLHHWSWASDMPLECAIHFVEIRCYIDNL 176
Query: 560 GVKSTKAELIIMTAPKFNVPPRFRDTAY-----FDKGENVVVKIPFTGYPKPKITWYRDN 614
+ + + P + + G ++ + + +
Sbjct: 177 HFSGLEEWSDWSPVKQISWIPDSQTKVFPQDKVILVGSDITFCCVSQEKVLSALIGHTNC 236
Query: 615 EVIESGGHFHVETSERHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQISDRPDPPQ 674
+I + + IR+ S +A + I PD PQ
Sbjct: 237 PLI--------HLDGENVAIKIRNIS--VSASSGTNVVFTTEDNIFGTVIFAGYPPDTPQ 286
Query: 675 FPTVEDIGHDSLALVWRAPIWDG--GSNITNYIVEKR---EHPMSSWIRVGNTRFTTMAI 729
E + W G T+Y + + ++ +
Sbjct: 287 QLNCETHDLKEIICSWNPGRVTALVGPRATSYTLVESFSGKYVRLKRAEAPTNESYQLLF 346
Query: 730 TGLSPGHQYEFRVYAENVYGRSDPSTTSDL 759
L Y F + A N GRS + ++
Sbjct: 347 QMLPNQEIYNFTLNAHNPLGRSQSTILVNI 376
Score = 67.2 bits (163), Expect = 4e-11
Identities = 63/442 (14%), Positives = 120/442 (27%), Gaps = 82/442 (18%)
Query: 902 PHPPENLH-ADEFAGDSLTLYWTPPR---DNGGSEITNYVVEKKDYNSTVWTKVSSYVTT 957
P PE L + +F+ +L L W + + I V +K+ V
Sbjct: 85 PDTPEILQLSADFSTSTLYLKWNDRGSVFPHRSNVIWEIKVLRKESMELVKLVTHQTTLN 144
Query: 958 PFVRVRNLAIGS-------TYEFRV-MAENQYGLSKPALTIDPIKAKHPFDVPGAPGAPK 1009
+ + + S + + + S D P +
Sbjct: 145 GKDTLHHWSWASDMPLECAIHFVEIRCYIDNLHFSGLEEWSDWS----PVKQISWIPDSQ 200
Query: 1010 GVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVS- 1068
+D + LV GS I V + + + I + +
Sbjct: 201 TKVFPQDKVILV--------GSDITFCCVSQEKVLSALIGHTNCPLIHLDGENVAIKIRN 252
Query: 1069 ------EGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPWSSS 1122
G ++ + + P+ L C +
Sbjct: 253 ISVSASSGTNVVFTTEDNIFGTVIFAGYPPDTPQQL---------NCETH--------DL 295
Query: 1123 SDIIMCCAPPCAPKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGR 1182
+II P + + +T+ FSG+ +E +
Sbjct: 296 KEIICSWNPGRVTALVGPRATS---------YTLVESFSGKYVRLKRAEAPTNESY---Q 343
Query: 1183 IKFETSENQTIYRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYVVD--KPSPPQGPLDV 1240
+ F+ NQ IY ++T+ N +G ++ V + + P P V
Sbjct: 344 LLFQMLPNQEIY------------NFTLNAHNPLGRSQSTILVNITEKVYPHTPTS-FKV 390
Query: 1241 SDITPESCSLSWKPPLDDGGSPITNYVVEKYESATGFWSKLSSFVRSPA----YDVFGLE 1296
DI + LSW P + +E +S + + + + L
Sbjct: 391 KDINSTAVKLSWHLPGNFAKINFL-CEIEIKKSNSVQEQRNVTIQGVENSSYLVALDKLN 449
Query: 1297 TNRQYRFRVRA--ENQYGVSEP 1316
Y FR+R E + S+
Sbjct: 450 PYTLYTFRIRCSTETFWKWSKW 471
Score = 66.0 bits (160), Expect = 8e-11
Identities = 51/466 (10%), Positives = 105/466 (22%), Gaps = 126/466 (27%)
Query: 1250 LSWKPPLDDGGSPITNYVVEKYESATGFWSKLSSFVRSPAYDVFGLETNRQYRFRVRAEN 1309
SWK P G +E+ + + + + L Y + + +
Sbjct: 14 CSWKAPSGTGRGTDYEVCIEQRSRSC-------YQLEKTSIKIPALSHG-DYEITINSLH 65
Query: 1310 QYGVSEPLELDNSITAKFPFTVPDPPGQPQI-VDWDTNNATLMWDRPRT--DGGSKIQG- 1365
+G S ++ + +PD P Q+ D+ T+ L W+ + S +
Sbjct: 66 DFGSSTSKF---TLNEQNVSLIPDTPEILQLSADFSTSTLYLKWNDRGSVFPHRSNVIWE 122
Query: 1366 ----------------YKMLLKTPTGELPTTIWSKIRPTSSTVYCKDTTMNSSN--SEPG 1407
++ L + S + + + + + S
Sbjct: 123 IKVLRKESMELVKLVTHQTTLNGKDTLHHWSWASDMPLECAIHFVEIRCYIDNLHFSGLE 182
Query: 1408 KQSGPVIVEEQPNKPVMDLSGV-RDITVKAGEDFSIHVPFMAFPQPAAFWFANDSIIDDS 1466
+ S V++ P +D + G D + A N +I
Sbjct: 183 EWSDWSPVKQISWIPDSQTKVFPQDKVILVGSDITFCCVSQEKVLSALIGHTNCPLI--- 239
Query: 1467 DTRVHKQLTMNSASLVVKNSQRSDGGQYRLQLKNPAGFDTATLHSRLRTLPDSV-NPRCH 1525
L + ++ ++N S + + PD+ C
Sbjct: 240 ------HLDGENVAIKIRNISVSA--SSGTNVVFTTEDNIFGTVIFAGYPPDTPQQLNCE 291
Query: 1526 LPSSTSKERPKFPTHPNHQPWLKWARASLTSKGVDSTEDSISLVWSKPRHDG--GSPIQR 1583
I W+ R G
Sbjct: 292 THDLK----------------------------------EIICSWNPGRVTALVGPRATS 317
Query: 1584 YIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEGKSIGSERGSTAQFLEREVGGAIWLK 1643
Y + + +K +
Sbjct: 318 YTLVESFSGKYVRLK--------------------------------------------R 333
Query: 1644 CNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPSICTTPVKI 1689
L Y F + A N +G+S+ +I +
Sbjct: 334 AEAPTNESYQLLFQMLPNQEIYNFTLNAHNPLGRSQSTILVNITEK 379
Score = 64.1 bits (155), Expect = 3e-10
Identities = 52/418 (12%), Positives = 115/418 (27%), Gaps = 40/418 (9%)
Query: 1573 PRHDGGSPIQRYIVEKRLISDDKW---IKASMAHIPDTSLKYVLWVSEGKSIGSERGSTA 1629
HD GS ++ + ++ +S I A ++L Y+ W G
Sbjct: 63 SLHDFGSSTSKFTLNEQNVSLIPDTPEILQLSADFSTSTL-YLKWNDRGSVFPHRSNVIW 121
Query: 1630 QFLEREVGGAIWLKCNDYN--------VLECSFSVLNLVEGNDYEFRI-IAVNAIGKSEP 1680
+ +K + + S++ +E + I ++ + S
Sbjct: 122 EIKVLRKESMELVKLVTHQTTLNGKDTLHHWSWASDMPLECAIHFVEIRCYIDNLHFSGL 181
Query: 1681 SICTTPVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISS 1740
+ + + V +D V+ +G +T C + + N I
Sbjct: 182 EEWSDWSPVKQISWIPDSQTKVFPQDKVILVGSDITFCCVSQEKVLSALIGHTNCPLIHL 241
Query: 1741 GARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMPNAL 1800
+ + + + + G PP P L
Sbjct: 242 DGE----------NVAIKIRNISVSASSGTNVVFTTEDNIFGTVIFAGYPP---DTPQQL 288
Query: 1801 YIPEGDNTKVKI--------FYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKE 1852
D ++ G + +L ++ + ++ + +
Sbjct: 289 NCETHDLKEIICSWNPGRVTALVGPRATSYTLVESFSGKYVRLKRAEAPTNESYQLLFQM 348
Query: 1853 IRKEDAGDYTVNLSNSSGSVSGTFTINIT--GLPGPPIGPLDVSEITKHTCTLHWNPPKY 1910
+ ++ ++T+N N G T +NIT P P V +I L W+ P
Sbjct: 349 LPNQEIYNFTLNAHNPLGRSQSTILVNITEKVYPHTPTS-FKVKDINSTAVKLSWHLPGN 407
Query: 1911 DGGLKVTHYVVERRDISMPHWICISTTC---HDTTFIVQGLTEGQEYLFHVMAVNENG 1965
+ + ++ S+ ++ + L Y F + E
Sbjct: 408 FAKINFLCEIEIKKSNSVQEQRNVTIQGVENSSYLVALDKLNPYTLYTFRIRCSTETF 465
Score = 60.6 bits (146), Expect = 4e-09
Identities = 30/293 (10%), Positives = 69/293 (23%), Gaps = 34/293 (11%)
Query: 1900 TCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHDTTFIVQGLTEGQEYLFHVM 1959
C+ W P G +E+R T+ + L+ G Y +
Sbjct: 13 QCS--WKAPSGTGRGTDYEVCIEQRS-------RSCYQLEKTSIKIPALSHGD-YEITIN 62
Query: 1960 AVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVT-QVGGDFVNLSW--DKPLDDGGSRI 2016
++++ G +N ++ P P I ++ + L W + S +
Sbjct: 63 SLHDFGSSTSKFTLNE---QNVSLIPDTPEILQLSADFSTSTLYLKWNDRGSVFPHRSNV 119
Query: 2017 QGYWIDKHEVGSDAWQRVNVA-------ICAPSQINIPNLIEGRQYEFRVYAQ-NEAGLS 2068
+ + + V +E + + + S
Sbjct: 120 IWEIKVLRKESMELVKLVTHQTTLNGKDTLHHWSWASDMPLECAIHFVEIRCYIDNLHFS 179
Query: 2069 LPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREI 2128
S+ +K + V ++ + + F C + I
Sbjct: 180 GLEEWSDWSPVKQISWIPDSQTKVFPQDKVILVGSDITFCCVSQEKVLSALIGHTNCPLI 239
Query: 2129 TPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAP 2181
+ I ++ + V + P
Sbjct: 240 HLDGE--------NVAIKIRNI--SVSASSGTNVVFTTEDNIFGTVIFAGYPP 282
Score = 52.5 bits (125), Expect = 1e-06
Identities = 50/438 (11%), Positives = 117/438 (26%), Gaps = 89/438 (20%)
Query: 690 WRAPIWDGGSNITNYIVEKREHPMSSWIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYG 749
W+AP G +E+R T++ I LS G YE + + + +G
Sbjct: 16 WKAPSGTGRGTDYEVCIEQRSRSCY------QLEKTSIKIPALSHG-DYEITINSLHDFG 68
Query: 750 RSDPSTTSDLITTKDTFKK----QIKKRQYDFDETGKKIRGKADEKVSDY-DQYVFDIYS 804
ST+ + ++ +I + DF + ++ V + +++I
Sbjct: 69 ---SSTSKFTLNEQNVSLIPDTPEILQLSADFSTSTLYLKWNDRGSVFPHRSNVIWEIKV 125
Query: 805 KYVPQPVDIKTSSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELI 864
+K + + + + ++ H +E I
Sbjct: 126 LRKESMELVKLVTHQTTLNGKDTLHHWSWA-------------SDMPLECAIHFVE---I 169
Query: 865 RKEIDIMNQLHHPKLINLHDAFEDDDEMVLIFEVLDRPHPPENLHADEFAGDSLTLYWTP 924
R ID + + + ++ I + + P + + G +T
Sbjct: 170 RCYIDN-LHFSGLEEWSDWSPVK---QISWIPDSQTKVFPQDKVIL---VGSDITFCCVS 222
Query: 925 PRDNGGSEITNYVVEKKDYNSTVWTKVSSYVTTPFVRVRNLAIGSTYEFRVMAENQYGLS 984
+ + ++ + + + +RN+++ ++ V+ + +
Sbjct: 223 QEK-----VLSALIGHTNCPLIHLDGENVAIK-----IRNISVSASSGTNVVFTTEDNIF 272
Query: 985 KPALTIDPIKAKHPFDVPGAPGAPKGVDSTEDSISLVWSKPRHDG--GSPIQRYIVEKRL 1042
+ P P I W+ R G Y + +
Sbjct: 273 GTVIFA--------GYPPDTPQQLNCETHDLKEIICSWNPGRVTALVGPRATSYTLVESF 324
Query: 1043 ISDDKWIKASMAHIPDTSLKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENH 1102
+K + A ++ L
Sbjct: 325 SGKYVRLKRAEAPTNESYQLLF-------------------------------QMLPNQE 353
Query: 1103 EYEFRVCAVNAAGQGPWS 1120
Y F + A N G+ +
Sbjct: 354 IYNFTLNAHNPLGRSQST 371
Score = 40.6 bits (94), Expect = 0.006
Identities = 23/138 (16%), Positives = 39/138 (28%), Gaps = 14/138 (10%)
Query: 2000 FVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRV 2059
SW P G I++ +Q + I IP L G YE +
Sbjct: 11 VWQCSWKAPSGTGRGTDYEVCIEQRS--RSCYQ------LEKTSIKIPALSHG-DYEITI 61
Query: 2060 YAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTI 2119
+ ++ G S N + PEI L+ + + G P
Sbjct: 62 NSLHDFGSSTSKFTLNEQNVSLIPD--TPEI---LQLSADFSTSTLYLKWNDRGSVFPHR 116
Query: 2120 SWLKGSREITPSARHHIF 2137
S + ++ +
Sbjct: 117 SNVIWEIKVLRKESMELV 134
>1bpv_A Titin, A71, connectin; fibronectin type III; NMR {Homo sapiens}
SCOP: b.1.2.1
Length = 112
Score = 118 bits (297), Expect = 3e-31
Identities = 39/101 (38%), Positives = 53/101 (52%), Gaps = 3/101 (2%)
Query: 670 PDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSWIRV--GNTRFTTM 727
DPP P +I ++ L W P + GG IT+YIVEKR+ P W++ N
Sbjct: 11 IDPPGKPVPLNITRHTVTLKWAKPEYTGGFKITSYIVEKRDLPNGRWLKANFSNILENEF 70
Query: 728 AITGLSPGHQYEFRVYAENVYGR-SDPSTTSDLITTKDTFK 767
++GL+ YEFRV A+N G S PS SD IT +D +
Sbjct: 71 TVSGLTEDAAYEFRVIAKNAAGAISPPSEPSDAITCRDDVE 111
Score = 117 bits (296), Expect = 4e-31
Identities = 34/102 (33%), Positives = 53/102 (51%), Gaps = 1/102 (0%)
Query: 378 PSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQI 437
PPG PV + V L W KP GG +I Y ++K ++ + W + N + ++
Sbjct: 11 IDPPGKPVPLNITRHTVTLKWAKPEYTGGFKITSYIVEKRDLPNGRWLKANFSNILENEF 70
Query: 438 NIPNLIEGRQYEFRVYAQNEAG-LSLPSSASNSVQIKDPMAA 478
+ L E YEFRV A+N AG +S PS S+++ +D + A
Sbjct: 71 TVSGLTEDAAYEFRVIAKNAAGAISPPSEPSDAITCRDDVEA 112
Score = 117 bits (296), Expect = 4e-31
Identities = 34/102 (33%), Positives = 53/102 (51%), Gaps = 1/102 (0%)
Query: 1985 PSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQI 2044
PPG PV + V L W KP GG +I Y ++K ++ + W + N + ++
Sbjct: 11 IDPPGKPVPLNITRHTVTLKWAKPEYTGGFKITSYIVEKRDLPNGRWLKANFSNILENEF 70
Query: 2045 NIPNLIEGRQYEFRVYAQNEAG-LSLPSSASNSVQIKDPMAA 2085
+ L E YEFRV A+N AG +S PS S+++ +D + A
Sbjct: 71 TVSGLTEDAAYEFRVIAKNAAGAISPPSEPSDAITCRDDVEA 112
Score = 109 bits (275), Expect = 3e-28
Identities = 41/139 (29%), Positives = 58/139 (41%), Gaps = 33/139 (23%)
Query: 995 AKHPFDVPGAPGAPKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMA 1054
H PG P ++ T +++L W+KP + GG I YIVEKR + + +W+KA+ +
Sbjct: 4 HHHHSSPIDPPGKPVPLNITRHTVTLKWAKPEYTGGFKITSYIVEKRDLPNGRWLKANFS 63
Query: 1055 HIPDTSLKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAA 1114
+I + V+ L E+ YEFRV A NAA
Sbjct: 64 NILENEFT--------------------------------VSGLTEDAAYEFRVIAKNAA 91
Query: 1115 GQ-GPWSSSSDIIMCCAPP 1132
G P S SD I C
Sbjct: 92 GAISPPSEPSDAITCRDDV 110
Score = 105 bits (263), Expect = 1e-26
Identities = 35/101 (34%), Positives = 51/101 (50%), Gaps = 3/101 (2%)
Query: 1231 PSPPQGPLDVSDITPESCSLSWKPPLDDGGSPITNYVVEKYESATGFWSKLS-SFVRSPA 1289
PP P+ +IT + +L W P GG IT+Y+VEK + G W K + S +
Sbjct: 11 IDPPGKPV-PLNITRHTVTLKWAKPEYTGGFKITSYIVEKRDLPNGRWLKANFSNILENE 69
Query: 1290 YDVFGLETNRQYRFRVRAENQYG-VSEPLELDNSITAKFPF 1329
+ V GL + Y FRV A+N G +S P E ++IT +
Sbjct: 70 FTVSGLTEDAAYEFRVIAKNAAGAISPPSEPSDAITCRDDV 110
Score = 102 bits (257), Expect = 1e-25
Identities = 38/102 (37%), Positives = 53/102 (51%), Gaps = 3/102 (2%)
Query: 277 PGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWI-CISTTCHDTT 335
PP P+ IT+HT TL W P+Y GG K+T Y+VE+RD+ W+ + +
Sbjct: 11 IDPPGKPV-PLNITRHTVTLKWAKPEYTGGFKITSYIVEKRDLPNGRWLKANFSNILENE 69
Query: 336 FIVQGLTEGQEYLFHVMAVNENG-MGPPLEGINPIKAKSPYD 376
F V GLTE Y F V+A N G + PP E + I + +
Sbjct: 70 FTVSGLTEDAAYEFRVIAKNAAGAISPPSEPSDAITCRDDVE 111
Score = 102 bits (257), Expect = 1e-25
Identities = 38/102 (37%), Positives = 53/102 (51%), Gaps = 3/102 (2%)
Query: 1884 PGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWI-CISTTCHDTT 1942
PP P+ IT+HT TL W P+Y GG K+T Y+VE+RD+ W+ + +
Sbjct: 11 IDPPGKPV-PLNITRHTVTLKWAKPEYTGGFKITSYIVEKRDLPNGRWLKANFSNILENE 69
Query: 1943 FIVQGLTEGQEYLFHVMAVNENG-MGPPLEGINPIKAKSPYD 1983
F V GLTE Y F V+A N G + PP E + I + +
Sbjct: 70 FTVSGLTEDAAYEFRVIAKNAAGAISPPSEPSDAITCRDDVE 111
Score = 102 bits (255), Expect = 2e-25
Identities = 31/101 (30%), Positives = 47/101 (46%), Gaps = 2/101 (1%)
Query: 902 PHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTKVSSY-VTTPFV 960
PP ++TL W P GG +IT+Y+VEK+D + W K + +
Sbjct: 11 IDPPGKPVPLNITRHTVTLKWAKPEYTGGFKITSYIVEKRDLPNGRWLKANFSNILENEF 70
Query: 961 RVRNLAIGSTYEFRVMAENQYG-LSKPALTIDPIKAKHPFD 1000
V L + YEFRV+A+N G +S P+ D I + +
Sbjct: 71 TVSGLTEDAAYEFRVIAKNAAGAISPPSEPSDAITCRDDVE 111
Score = 88.9 bits (221), Expect = 6e-21
Identities = 37/132 (28%), Positives = 51/132 (38%), Gaps = 46/132 (34%)
Query: 1559 VDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEG 1618
++ T +++L W+KP + GG I YIVEKR
Sbjct: 20 LNITRHTVTLKWAKPEYTGGFKITSYIVEKR----------------------------- 50
Query: 1619 KSIGSERGSTAQFLEREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGK- 1677
++ WLK N N+LE F+V L E YEFR+IA NA G
Sbjct: 51 ----------------DLPNGRWLKANFSNILENEFTVSGLTEDAAYEFRVIAKNAAGAI 94
Query: 1678 SEPSICTTPVKI 1689
S PS + +
Sbjct: 95 SPPSEPSDAITC 106
Score = 76.6 bits (189), Expect = 1e-16
Identities = 27/62 (43%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 22 YIIERREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGK-SEPSICTTPV 80
YI+E+R++ WLK N N+LE F+V L E YEFR+IA NA G S PS + +
Sbjct: 45 YIVEKRDLPNGRWLKANFSNILENEFTVSGLTEDAAYEFRVIAKNAAGAISPPSEPSDAI 104
Query: 81 KI 82
Sbjct: 105 TC 106
Score = 55.8 bits (135), Expect = 2e-09
Identities = 22/115 (19%), Positives = 36/115 (31%), Gaps = 28/115 (24%)
Query: 1325 AKFPFTVPDPPGQPQIVDWDTNNATLMWDRPRTDGGSKIQGYKMLLKTPTGELPTTIWSK 1384
+ DPPG+P ++ + TL W +P GG KI Y + + +LP W K
Sbjct: 4 HHHHSSPIDPPGKPVPLNITRHTVTLKWAKPEYTGGFKITSYIVEKR----DLPNGRWLK 59
Query: 1385 IRPTSSTVYCKDTTMNSSN--------------------SEPGKQSGPVIVEEQP 1419
+ + S S P + S + +
Sbjct: 60 A----NFSNILENEFTVSGLTEDAAYEFRVIAKNAAGAISPPSEPSDAITCRDDV 110
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold,
glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4
b.1.1.4 PDB: 2ncm_A 3ncm_A
Length = 191
Score = 121 bits (304), Expect = 3e-31
Identities = 36/193 (18%), Positives = 57/193 (29%), Gaps = 9/193 (4%)
Query: 479 KAPEIIVPLRNANAIQNHNAQFQCTITGCPK-PTISWLKGSREITPSARHHI---FAEGD 534
+ ++ + + F C + G K ISW + E + I + + D
Sbjct: 1 RVLQVDIVPSQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDD 60
Query: 535 TYTLIINSVYGVDADEYVCRAVNK-GGVKSTKAELIIMTAPKFNVPPRFRDTAYFDKGEN 593
+ TL I + DA Y C + G + I F P F +GE+
Sbjct: 61 SSTLTIYNANIDDAGIYKCVVTAEDGTQSEATVNVKIFQKLMFKNAPT---PQEFKEGED 117
Query: 594 VVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAPYRVVAEN 653
V+ P I W + + L IR D YR
Sbjct: 118 AVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLSNNY-LQIRGIKKTDEGTYRCEGRI 176
Query: 654 DLGMDSAIVKIQI 666
+ IQ+
Sbjct: 177 LARGEINFKDIQV 189
Score = 111 bits (280), Expect = 7e-28
Identities = 34/189 (17%), Positives = 53/189 (28%), Gaps = 6/189 (3%)
Query: 91 PDFIVPLKDLVVPLGKLLTLQCEATGTP-VPKCRWLRNGREISSGARYR---VETAGGVF 146
+ + +G+ C+ G W E S + R V
Sbjct: 3 LQVDIVPSQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSS 62
Query: 147 RLHFNEVTDVDNGDYTCEAYNSVGFAHTSS-RVKIGTPPRIDRMPNALYIPEGDNTKVKI 205
L D G Y C G ++ VKI P EG++ +
Sbjct: 63 TLTIYNANIDDAGIYKCVVTAEDGTQSEATVNVKIFQKLMFKNAPTPQEFKEGEDAVIVC 122
Query: 206 FYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSV 265
P + GR V +F VL + + I+ I+K D G Y +
Sbjct: 123 DVVSSLPPTIIWKHKGRDVILKKDVRFIVLSNNYLQ-IRGIKKTDEGTYRCEGRILARGE 181
Query: 266 SGTFTINIT 274
I +
Sbjct: 182 INFKDIQVI 190
Score = 111 bits (280), Expect = 7e-28
Identities = 34/189 (17%), Positives = 53/189 (28%), Gaps = 6/189 (3%)
Query: 1698 PDFIVPLKDLVVPLGKLLTLQCEATGTP-VPKCRWLRNGREISSGARYR---VETAGGVF 1753
+ + +G+ C+ G W E S + R V
Sbjct: 3 LQVDIVPSQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSS 62
Query: 1754 RLHFNEVTDVDNGDYTCEAYNSVGFAHTSS-RVKIGTPPRIDRMPNALYIPEGDNTKVKI 1812
L D G Y C G ++ VKI P EG++ +
Sbjct: 63 TLTIYNANIDDAGIYKCVVTAEDGTQSEATVNVKIFQKLMFKNAPTPQEFKEGEDAVIVC 122
Query: 1813 FYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSV 1872
P + GR V +F VL + + I+ I+K D G Y +
Sbjct: 123 DVVSSLPPTIIWKHKGRDVILKKDVRFIVLSNNYLQ-IRGIKKTDEGTYRCEGRILARGE 181
Query: 1873 SGTFTINIT 1881
I +
Sbjct: 182 INFKDIQVI 190
Score = 84.5 bits (209), Expect = 2e-18
Identities = 15/119 (12%), Positives = 31/119 (26%), Gaps = 8/119 (6%)
Query: 453 YAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTI 512
E G ++ + + K + +A C + PTI
Sbjct: 80 VVTAEDGTQSEATVNVKIFQK-------LMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTI 132
Query: 513 SWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIM 571
W R++ + L I + D Y C + ++ ++
Sbjct: 133 IWKHKGRDVILKKDVRFIVLSN-NYLQIRGIKKTDEGTYRCEGRILARGEINFKDIQVI 190
Score = 84.5 bits (209), Expect = 2e-18
Identities = 15/119 (12%), Positives = 31/119 (26%), Gaps = 8/119 (6%)
Query: 2060 YAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTI 2119
E G ++ + + K + +A C + PTI
Sbjct: 80 VVTAEDGTQSEATVNVKIFQK-------LMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTI 132
Query: 2120 SWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIM 2178
W R++ + L I + D Y C + ++ ++
Sbjct: 133 IWKHKGRDVILKKDVRFIVLSN-NYLQIRGIKKTDEGTYRCEGRILARGEINFKDIQVI 190
Score = 81.4 bits (201), Expect = 2e-17
Identities = 15/93 (16%), Positives = 27/93 (29%), Gaps = 3/93 (3%)
Query: 89 EKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVET-AGGVFR 147
+K F G+ + C+ + P W GR++ R +
Sbjct: 99 QKLMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLSNNY-- 156
Query: 148 LHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKI 180
L + D G Y CE +++
Sbjct: 157 LQIRGIKKTDEGTYRCEGRILARGEINFKDIQV 189
Score = 81.4 bits (201), Expect = 2e-17
Identities = 15/93 (16%), Positives = 27/93 (29%), Gaps = 3/93 (3%)
Query: 1696 EKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVET-AGGVFR 1754
+K F G+ + C+ + P W GR++ R +
Sbjct: 99 QKLMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLSNNY-- 156
Query: 1755 LHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKI 1787
L + D G Y CE +++
Sbjct: 157 LQIRGIKKTDEGTYRCEGRILARGEINFKDIQV 189
Score = 80.3 bits (198), Expect = 5e-17
Identities = 25/124 (20%), Positives = 42/124 (33%), Gaps = 7/124 (5%)
Query: 2086 KAPEIIVPLRNANAIQNHNAQFQCTITGCPK-PTISWLKGSREITPSARHHI---FAEGD 2141
+ ++ + + F C + G K ISW + E + I + + D
Sbjct: 1 RVLQVDIVPSQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDD 60
Query: 2142 TYTLIINSVYGVDADEYVCRAVNK-GGVKSTKAELIIMTAPKFNVPPRFRDTAYFESDVV 2200
+ TL I + DA Y C + G + I F P + E +
Sbjct: 61 SSTLTIYNANIDDAGIYKCVVTAEDGTQSEATVNVKIFQKLMFKNAP--TPQEFKEGEDA 118
Query: 2201 VVVC 2204
V+VC
Sbjct: 119 VIVC 122
Score = 54.8 bits (132), Expect = 3e-08
Identities = 17/95 (17%), Positives = 29/95 (30%), Gaps = 4/95 (4%)
Query: 1134 APKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQTI 1193
+ + GE+ I PT IW G +V ++F N +
Sbjct: 100 KLMFKNAPT--PQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLSNNYL 157
Query: 1194 YRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYVV 1228
K TD G+Y + + + V+
Sbjct: 158 QIRGIKK--TDEGTYRCEGRILARGEINFKDIQVI 190
Score = 44.8 bits (106), Expect = 9e-05
Identities = 16/80 (20%), Positives = 30/80 (37%), Gaps = 4/80 (5%)
Query: 1430 RDITVKAGEDFSIHVPFMAFPQPAAFWFANDS-IIDDSDTRVHKQLTMNSASLVVKNSQR 1488
K GED I ++ P W +I D R +++ L ++ ++
Sbjct: 108 TPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFI---VLSNNYLQIRGIKK 164
Query: 1489 SDGGQYRLQLKNPAGFDTAT 1508
+D G YR + + A +
Sbjct: 165 TDEGTYRCEGRILARGEINF 184
Score = 41.0 bits (96), Expect = 0.001
Identities = 24/115 (20%), Positives = 39/115 (33%), Gaps = 14/115 (12%)
Query: 1135 PKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPI-WT-VNGDEVSP-DGRIKFETSENQ 1191
++ S + GE +G K I W NG+++SP RI +++
Sbjct: 3 LQVDIVPS--QGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDD 60
Query: 1192 ----TIYRNKSAKRATDSGSYTIQLVNTVGSD-SASCKVYVVDKPSPPQGPLDVS 1241
TIY D+G Y + G+ A+ V + K P
Sbjct: 61 SSTLTIYN----ANIDDAGIYKCVVTAEDGTQSEATVNVKIFQKLMFKNAPTPQE 111
Score = 36.0 bits (83), Expect = 0.068
Identities = 12/77 (15%), Positives = 26/77 (33%), Gaps = 3/77 (3%)
Query: 1430 RDITVKAGEDFSIHVPFMAFPQPAA-FWFANDS-IIDDSDTRV-HKQLTMNSASLVVKNS 1486
+ GE + WF+ + + + R+ +S++L + N+
Sbjct: 10 SQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNA 69
Query: 1487 QRSDGGQYRLQLKNPAG 1503
D G Y+ + G
Sbjct: 70 NIDDAGIYKCVVTAEDG 86
>1wf5_A Sidekick 2 protein; FNIII domain, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Length = 121
Score = 116 bits (293), Expect = 1e-30
Identities = 31/123 (25%), Positives = 54/123 (43%), Gaps = 8/123 (6%)
Query: 1215 TVGSDSASCKVYVVDKPSPPQGP-LDVSDITPESCSLSWKPPLDDGGSPITNYVVEKYES 1273
+ GS S + V P P+ P +S + + +L+W P DG SP+ Y++E E+
Sbjct: 2 SSGSSGRSAHLRVRQLPHAPEHPVATLSTVERRAINLTWTKP-FDGNSPLIRYILEMSEN 60
Query: 1274 ATGFWSKLSSF-VRSPAYDVFGLETNRQYRFRVRAENQYGVSEPLELDNSITAKFPFTVP 1332
+ L+S ++ + V GL R Y+FR+ A N G + + ++
Sbjct: 61 NAPWTVLLASVDPKATSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLP-----E 115
Query: 1333 DPP 1335
P
Sbjct: 116 SGP 118
Score = 116 bits (293), Expect = 1e-30
Identities = 26/114 (22%), Positives = 53/114 (46%), Gaps = 5/114 (4%)
Query: 656 GMDSAIVKIQISDRPDPPQFP--TVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPM 713
G +++ P P+ P T+ + ++ L W P DG S + YI+E E+
Sbjct: 4 GSSGRSAHLRVRQLPHAPEHPVATLSTVERRAINLTWTKPF-DGNSPLIRYILEMSENNA 62
Query: 714 SSWIRVGNT--RFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKDT 765
+ + + + T++ + GL P Y+FR+ A N G+ S ++ ++ ++
Sbjct: 63 PWTVLLASVDPKATSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPES 116
Score = 111 bits (280), Expect = 9e-29
Identities = 31/121 (25%), Positives = 54/121 (44%), Gaps = 5/121 (4%)
Query: 261 SSGSVSGTFTINITGLPGPPIGP-LDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDI 319
SSGS + + + LP P P +S + + L W P +DG + Y++E +
Sbjct: 2 SSGSSGRSAHLRVRQLPHAPEHPVATLSTVERRAINLTWTKP-FDGNSPLIRYILEMSEN 60
Query: 320 SMPHWICISTT-CHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKP 378
+ P + +++ T+ V+GL + Y F + AVN+ G G + + P P
Sbjct: 61 NAPWTVLLASVDPKATSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSL--PESGP 118
Query: 379 S 379
S
Sbjct: 119 S 119
Score = 111 bits (280), Expect = 9e-29
Identities = 31/121 (25%), Positives = 54/121 (44%), Gaps = 5/121 (4%)
Query: 1868 SSGSVSGTFTINITGLPGPPIGP-LDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDI 1926
SSGS + + + LP P P +S + + L W P +DG + Y++E +
Sbjct: 2 SSGSSGRSAHLRVRQLPHAPEHPVATLSTVERRAINLTWTKP-FDGNSPLIRYILEMSEN 60
Query: 1927 SMPHWICISTT-CHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKP 1985
+ P + +++ T+ V+GL + Y F + AVN+ G G + + P P
Sbjct: 61 NAPWTVLLASVDPKATSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSL--PESGP 118
Query: 1986 S 1986
S
Sbjct: 119 S 119
Score = 98.6 bits (246), Expect = 3e-24
Identities = 26/102 (25%), Positives = 43/102 (42%), Gaps = 3/102 (2%)
Query: 376 DKPSPPGIPVVT--QVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICA 433
P P PV T V +NL+W KP DG S + Y ++ E + +
Sbjct: 16 QLPHAPEHPVATLSTVERRAINLTWTKP-FDGNSPLIRYILEMSENNAPWTVLLASVDPK 74
Query: 434 PSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDP 475
+ + + L+ R Y+FR+ A N+ G S + V + +
Sbjct: 75 ATSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPES 116
Score = 98.6 bits (246), Expect = 3e-24
Identities = 26/102 (25%), Positives = 43/102 (42%), Gaps = 3/102 (2%)
Query: 1983 DKPSPPGIPVVT--QVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICA 2040
P P PV T V +NL+W KP DG S + Y ++ E + +
Sbjct: 16 QLPHAPEHPVATLSTVERRAINLTWTKP-FDGNSPLIRYILEMSENNAPWTVLLASVDPK 74
Query: 2041 PSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDP 2082
+ + + L+ R Y+FR+ A N+ G S + V + +
Sbjct: 75 ATSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPES 116
Score = 95.9 bits (239), Expect = 3e-23
Identities = 26/113 (23%), Positives = 45/113 (39%), Gaps = 9/113 (7%)
Query: 898 VLDRPHPPEN--LHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTKVSSY- 954
V PH PE+ ++ L WT P D G S + Y++E + N+ ++S
Sbjct: 14 VRQLPHAPEHPVATLSTVERRAINLTWTKPFD-GNSPLIRYILEMSENNAPWTVLLASVD 72
Query: 955 VTTPFVRVRNLAIGSTYEFRVMAENQYGLSKPALTIDPIKAKHPFDVPGAPGA 1007
V V+ L +Y+FR+ A N G + + + + P +
Sbjct: 73 PKATSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLP-----ESGPSS 120
Score = 94.7 bits (236), Expect = 9e-23
Identities = 33/138 (23%), Positives = 51/138 (36%), Gaps = 37/138 (26%)
Query: 1000 DVPGAPGAPKGV--DSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIP 1057
+P AP P +I+L W+KP DG SP+ RYI+E + + +
Sbjct: 16 QLPHAPEHPVATLSTVERRAINLTWTKP-FDGNSPLIRYILEMSENNAPWTVLLASVDPK 74
Query: 1058 DTSLKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQG 1117
TS+ V L+ Y+FR+CAVN G+G
Sbjct: 75 ATSVT--------------------------------VKGLVPARSYQFRLCAVNDVGKG 102
Query: 1118 PWSSSSDIIMCCAPPCAP 1135
+S ++ + P P
Sbjct: 103 QFSKDTERVS--LPESGP 118
Score = 79.3 bits (196), Expect = 2e-17
Identities = 29/130 (22%), Positives = 42/130 (32%), Gaps = 46/130 (35%)
Query: 1560 DSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEGK 1619
+I+L W+KP DG SP+ RYI+E
Sbjct: 30 TVERRAINLTWTKP-FDGNSPLIRYILEMS------------------------------ 58
Query: 1620 SIGSERGSTAQFLEREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSE 1679
E + + S +V LV Y+FR+ AVN +GK +
Sbjct: 59 ---------------ENNAPWTVLLASVDPKATSVTVKGLVPARSYQFRLCAVNDVGKGQ 103
Query: 1680 PSICTTPVKI 1689
S T V +
Sbjct: 104 FSKDTERVSL 113
Score = 73.2 bits (180), Expect = 3e-15
Identities = 19/62 (30%), Positives = 28/62 (45%)
Query: 21 CYIIERREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPSICTTPV 80
YI+E E + + S +V LV Y+FR+ AVN +GK + S T V
Sbjct: 52 RYILEMSENNAPWTVLLASVDPKATSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTERV 111
Query: 81 KI 82
+
Sbjct: 112 SL 113
Score = 40.8 bits (96), Expect = 6e-04
Identities = 10/39 (25%), Positives = 14/39 (35%), Gaps = 3/39 (7%)
Query: 1330 TVPDPPGQPQIV--DWDTNNATLMWDRPRTDGGSKIQGY 1366
+P P P + L W +P DG S + Y
Sbjct: 16 QLPHAPEHPVATLSTVERRAINLTWTKP-FDGNSPLIRY 53
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion,
membrane, development protein; HET: NAG; 1.95A
{Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Length = 388
Score = 124 bits (313), Expect = 3e-30
Identities = 43/222 (19%), Positives = 76/222 (34%), Gaps = 17/222 (7%)
Query: 449 EFRVYAQNEAGLSLPSSAS-NSVQIKDPMAAKAPEIIVPL-RNANAIQNHNAQFQCTITG 506
++ ++ SA+ + I +P+++ AP + + + H C G
Sbjct: 179 SYQCRTKHRLTGETRLSATKGRLVITEPISSSAPRTPALVQKPLELMVAHTISLLCPAQG 238
Query: 507 CPKPTISWLKGSREITPSARHHIFAEGDTY--TLIINSVYGVDADEYVCRAVNKGGVKST 564
P P+ W K T + TLII D+ +Y+C N G +S
Sbjct: 239 FPAPSFRWYKFIEGTTRKQAVVLNDRVKQVSGTLIIKDAVVEDSGKYLCVVNNSVGGESV 298
Query: 565 KAELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFH 624
+ L + + P T D G V +TG P ++W +D + I
Sbjct: 299 ETVLTVTAPLSAKIDPP---TQTVDFGRPAVFTCQYTGNPIKTVSWMKDGKAIGHSES-- 353
Query: 625 VETSERHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQI 666
+L I D Y+ ND A ++++
Sbjct: 354 --------VLRIESVKKEDKGMYQCFVRNDRESAEASAELKL 387
Score = 115 bits (289), Expect = 3e-27
Identities = 42/217 (19%), Positives = 74/217 (34%), Gaps = 18/217 (8%)
Query: 63 IAVNAIGKSEPSICTTPVKI-CEFVGGEKPDFIVPL-KDLVVPLGKLLTLQCEATGTPVP 120
+ + T + E + P + K L + + ++L C A G P P
Sbjct: 183 RTKHRLTGETRLSATKGRLVITEPISSSAPRTPALVQKPLELMVAHTISLLCPAQGFPAP 242
Query: 121 KCRWLRNGREISSGARY----RVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSS 176
RW + + RV+ G L + D+G Y C NSVG +
Sbjct: 243 SFRWYKFIEGTTRKQAVVLNDRVKQVSGT--LIIKDAVVEDSGKYLCVVNNSVGGESVET 300
Query: 177 RVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLD 236
+ + P P + G Y G+ VS K+G+ + +
Sbjct: 301 VLTVTAPLSAKIDPPTQTVDFGRPAVFTCQYTGNPIKTVSWMKDGKAIGHSES------- 353
Query: 237 DYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINI 273
++ I+ ++KED G Y + N S + + +
Sbjct: 354 ---VLRIESVKKEDKGMYQCFVRNDRESAEASAELKL 387
Score = 115 bits (289), Expect = 3e-27
Identities = 42/217 (19%), Positives = 74/217 (34%), Gaps = 18/217 (8%)
Query: 1670 IAVNAIGKSEPSICTTPVKI-CEFVGGEKPDFIVPL-KDLVVPLGKLLTLQCEATGTPVP 1727
+ + T + E + P + K L + + ++L C A G P P
Sbjct: 183 RTKHRLTGETRLSATKGRLVITEPISSSAPRTPALVQKPLELMVAHTISLLCPAQGFPAP 242
Query: 1728 KCRWLRNGREISSGARY----RVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSS 1783
RW + + RV+ G L + D+G Y C NSVG +
Sbjct: 243 SFRWYKFIEGTTRKQAVVLNDRVKQVSGT--LIIKDAVVEDSGKYLCVVNNSVGGESVET 300
Query: 1784 RVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLD 1843
+ + P P + G Y G+ VS K+G+ + +
Sbjct: 301 VLTVTAPLSAKIDPPTQTVDFGRPAVFTCQYTGNPIKTVSWMKDGKAIGHSES------- 353
Query: 1844 DYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINI 1880
++ I+ ++KED G Y + N S + + +
Sbjct: 354 ---VLRIESVKKEDKGMYQCFVRNDRESAEASAELKL 387
Score = 107 bits (269), Expect = 1e-24
Identities = 46/240 (19%), Positives = 80/240 (33%), Gaps = 31/240 (12%)
Query: 454 AQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTI---TGCPKP 510
A+N+ G S S V ++ A A + + I+ ++A +C I
Sbjct: 84 ARNQFG----SIISRDVHVR---AVVAQYYEADVNKEHVIRGNSAVIKCLIPSFVADFVE 136
Query: 511 TISWLKGSRE-----ITPSARHHIFAEGDTYTLIINSVYGVDAD-EYVCRAVNKGG---V 561
+SW E ++ + G L I V D Y CR ++
Sbjct: 137 VVSWHTDEEENYFPGAEYDGKYLVLPSG---ELHIREVGPEDGYKSYQCRTKHRLTGETR 193
Query: 562 KSTKAELIIMTAPKFNVPPR----FRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVI 617
S +++T P + PR + + + P G+P P WY+ E
Sbjct: 194 LSATKGRLVITEPISSSAPRTPALVQKPLELMVAHTISLLCPAQGFPAPSFRWYKFIEGT 253
Query: 618 ESG--GHFHVETSERHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQISDRPDPPQF 675
+ + L I+DA D+ Y V N +G +S + ++ P
Sbjct: 254 TRKQAVVLNDRVKQVSGTLIIKDAVVEDSGKYLCVVNNSVGGESVETVLTVT---APLSA 310
Score = 100 bits (249), Expect = 5e-22
Identities = 64/439 (14%), Positives = 110/439 (25%), Gaps = 110/439 (25%)
Query: 1409 QSGPVIVEEQPNKPVMDLSGVRDITVKAGEDFSIHVPFMAFPQPAAFWFANDSIIDDSDT 1468
Q GPV ++E N I I P P W +D
Sbjct: 1 QKGPVFLKEPTN----------RIDFSNSTGAEIECKASGNPMPEIIWIRSDGTAVGDVP 50
Query: 1469 RVHKQLTMNSASLVVKN------SQRSDGGQYRLQLKNPAG-FDTATLHSRLRTLPDSVN 1521
+ + + LV Q Y +N G + +H R
Sbjct: 51 GLRQIS--SDGKLVFPPFRAEDYRQEVHAQVYACLARNQFGSIISRDVHVRAVVAQYYEA 108
Query: 1522 P--------------RCHLPSSTSKERPKFPTHPNHQPWLKWARASLTSKGVDSTEDS-- 1565
+C +PS + + W + + D
Sbjct: 109 DVNKEHVIRGNSAVIKCLIPSF----------VADFVEVVSWHTDEEENYFPGAEYDGKY 158
Query: 1566 ---------ISLVWSK---------PRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDT 1607
I V + +H + + RL+ + +S A
Sbjct: 159 LVLPSGELHIREVGPEDGYKSYQCRTKHRLTGETRLSATKGRLVITEP--ISSSAPRTPA 216
Query: 1608 SLKYVLWVSEGKSIGSERGSTAQFLEREVGGA-----IWLKCNDYNVLECSFSVLNLVEG 1662
++ L + +I L G W K + + + + + V+
Sbjct: 217 LVQKPLELMVAHTI---------SLLCPAQGFPAPSFRWYKFIEGTTRKQAVVLNDRVKQ 267
Query: 1663 NDYEFRI-------------IAVNAIGKSEPSICTTPVKICEFVGGEKPDFIVPLKDLVV 1709
I + N++G T V + V
Sbjct: 268 VSGTLIIKDAVVEDSGKYLCVVNNSVGGESVETVLT-VT-------APLSAKIDPPTQTV 319
Query: 1710 PLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYT 1769
G+ C+ TG P+ W+++G+ I L V D G Y
Sbjct: 320 DFGRPAVFTCQYTGNPIKTVSWMKDGKAIGHSES----------VLRIESVKKEDKGMYQ 369
Query: 1770 CEAYNSVGFAHTSSRVKIG 1788
C N A S+ +K+G
Sbjct: 370 CFVRNDRESAEASAELKLG 388
Score = 91.5 bits (227), Expect = 3e-19
Identities = 63/424 (14%), Positives = 117/424 (27%), Gaps = 75/424 (17%)
Query: 183 PPRIDRMP-NALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIII 241
P + P N + +++ +G+ E+ ++ D + D ++
Sbjct: 3 GPVFLKEPTNRIDFSNSTGAEIECKASGNPMPEIIWIRSDGTAVGDVPGLRQISSDGKLV 62
Query: 242 F-----IKEIRKEDAGDYTVNLSNSSGSV-SGTFTINITGLPGPPIGPLDVSEITKHTCT 295
F ++ A Y N GS+ S + I ++
Sbjct: 63 FPPFRAEDYRQEVHAQVYACLARNQFGSIISRDVHVRAVVAQYYEADVNKEHVIRGNSAV 122
Query: 296 LHWNPPKYDGGLK-VTHYVVERRDISMPHWICISTTCHDTTFIVQGLTEGQEYLFHV--- 351
+ P + V + + + P +D ++V L G+ ++ V
Sbjct: 123 IKCLIPSFVADFVEVVSWHTDEEENYFPG------AEYDGKYLV--LPSGELHIREVGPE 174
Query: 352 --------MAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQ-----VGGDFVNL-- 396
+ L + S P P + Q + ++L
Sbjct: 175 DGYKSYQCRTKHRLTGETRLSATKGRLVITEPISSSAPRTPALVQKPLELMVAHTISLLC 234
Query: 397 ----------SWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGR 446
W K G+ + V +D ++V+ + I + +
Sbjct: 235 PAQGFPAPSFRWYK--FIEGTTR-----KQAVVLNDRVKQVS------GTLIIKDAVVED 281
Query: 447 QYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITG 506
++ N G S + + P + A F C TG
Sbjct: 282 SGKYLCVVNNSVGGE---SVETVLTVTAP-----LSAKIDPPTQTVDFGRPAVFTCQYTG 333
Query: 507 CPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKA 566
P T+SW+K + I S L I SV D Y C N A
Sbjct: 334 NPIKTVSWMKDGKAIGHSES----------VLRIESVKKEDKGMYQCFVRNDRESAEASA 383
Query: 567 ELII 570
EL +
Sbjct: 384 ELKL 387
Score = 91.5 bits (227), Expect = 3e-19
Identities = 63/424 (14%), Positives = 117/424 (27%), Gaps = 75/424 (17%)
Query: 1790 PPRIDRMP-NALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIII 1848
P + P N + +++ +G+ E+ ++ D + D ++
Sbjct: 3 GPVFLKEPTNRIDFSNSTGAEIECKASGNPMPEIIWIRSDGTAVGDVPGLRQISSDGKLV 62
Query: 1849 F-----IKEIRKEDAGDYTVNLSNSSGSV-SGTFTINITGLPGPPIGPLDVSEITKHTCT 1902
F ++ A Y N GS+ S + I ++
Sbjct: 63 FPPFRAEDYRQEVHAQVYACLARNQFGSIISRDVHVRAVVAQYYEADVNKEHVIRGNSAV 122
Query: 1903 LHWNPPKYDGGLK-VTHYVVERRDISMPHWICISTTCHDTTFIVQGLTEGQEYLFHV--- 1958
+ P + V + + + P +D ++V L G+ ++ V
Sbjct: 123 IKCLIPSFVADFVEVVSWHTDEEENYFPG------AEYDGKYLV--LPSGELHIREVGPE 174
Query: 1959 --------MAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQ-----VGGDFVNL-- 2003
+ L + S P P + Q + ++L
Sbjct: 175 DGYKSYQCRTKHRLTGETRLSATKGRLVITEPISSSAPRTPALVQKPLELMVAHTISLLC 234
Query: 2004 ----------SWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGR 2053
W K G+ + V +D ++V+ + I + +
Sbjct: 235 PAQGFPAPSFRWYK--FIEGTTR-----KQAVVLNDRVKQVS------GTLIIKDAVVED 281
Query: 2054 QYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITG 2113
++ N G S + + P + A F C TG
Sbjct: 282 SGKYLCVVNNSVGGE---SVETVLTVTAP-----LSAKIDPPTQTVDFGRPAVFTCQYTG 333
Query: 2114 CPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKA 2173
P T+SW+K + I S L I SV D Y C N A
Sbjct: 334 NPIKTVSWMKDGKAIGHSES----------VLRIESVKKEDKGMYQCFVRNDRESAEASA 383
Query: 2174 ELII 2177
EL +
Sbjct: 384 ELKL 387
Score = 90.8 bits (225), Expect = 5e-19
Identities = 41/224 (18%), Positives = 78/224 (34%), Gaps = 22/224 (9%)
Query: 89 EKPDFIV-PLKDLVVPLGKLLTLQCEATGTPVPKCRWLR-NGREISSGARYRVETAGGVF 146
+ P F+ P + ++C+A+G P+P+ W+R +G + R ++ G
Sbjct: 2 KGPVFLKEPTNRIDFSNSTGAEIECKASGNPMPEIIWIRSDGTAVGDVPGLRQISSDG-- 59
Query: 147 RLHFNEVT------DVDNGDYTCEAYNSVGFAHTSS-RVKIGTPPRIDRMPNALYIPEGD 199
+L F +V Y C A N G + V+ + N ++ G+
Sbjct: 60 KLVFPPFRAEDYRQEVHAQVYACLARNQFGSIISRDVHVRAVVAQYYEADVNKEHVIRGN 119
Query: 200 NTKVK---IFYAGDQPMEVSLTKNGR---VVQSDDRFKFTVLDDYIIIFIKEIRKEDA-G 252
+ +K + D VS + ++ K+ VL + I+E+ ED
Sbjct: 120 SAVIKCLIPSFVADFVEVVSWHTDEEENYFPGAEYDGKYLVLPSGELH-IREVGPEDGYK 178
Query: 253 DYTVNLSNSSGS---VSGTFTINITGLPGPPIGPLDVSEITKHT 293
Y + +S T + P P + + K
Sbjct: 179 SYQCRTKHRLTGETRLSATKGRLVITEPISSSAPRTPALVQKPL 222
Score = 90.8 bits (225), Expect = 5e-19
Identities = 41/224 (18%), Positives = 78/224 (34%), Gaps = 22/224 (9%)
Query: 1696 EKPDFIV-PLKDLVVPLGKLLTLQCEATGTPVPKCRWLR-NGREISSGARYRVETAGGVF 1753
+ P F+ P + ++C+A+G P+P+ W+R +G + R ++ G
Sbjct: 2 KGPVFLKEPTNRIDFSNSTGAEIECKASGNPMPEIIWIRSDGTAVGDVPGLRQISSDG-- 59
Query: 1754 RLHFNEVT------DVDNGDYTCEAYNSVGFAHTSS-RVKIGTPPRIDRMPNALYIPEGD 1806
+L F +V Y C A N G + V+ + N ++ G+
Sbjct: 60 KLVFPPFRAEDYRQEVHAQVYACLARNQFGSIISRDVHVRAVVAQYYEADVNKEHVIRGN 119
Query: 1807 NTKVK---IFYAGDQPMEVSLTKNGR---VVQSDDRFKFTVLDDYIIIFIKEIRKEDA-G 1859
+ +K + D VS + ++ K+ VL + I+E+ ED
Sbjct: 120 SAVIKCLIPSFVADFVEVVSWHTDEEENYFPGAEYDGKYLVLPSGELH-IREVGPEDGYK 178
Query: 1860 DYTVNLSNSSGS---VSGTFTINITGLPGPPIGPLDVSEITKHT 1900
Y + +S T + P P + + K
Sbjct: 179 SYQCRTKHRLTGETRLSATKGRLVITEPISSSAPRTPALVQKPL 222
Score = 89.6 bits (222), Expect = 1e-18
Identities = 43/259 (16%), Positives = 68/259 (26%), Gaps = 37/259 (14%)
Query: 63 IAVNAIGKSEPSICTTPVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEA---TGTPV 119
+A N G SI + V + + + V G ++C V
Sbjct: 83 LARNQFG----SIISRDVHV---RAVVAQYYEADVNKEHVIRGNSAVIKCLIPSFVADFV 135
Query: 120 PKCRWLRNGRE-----ISSGARYRVETAGGVFRLHFNEVTDVDN-GDYTCEAYNSVGFAH 173
W + E +Y V +G LH EV D Y C + +
Sbjct: 136 EVVSWHTDEEENYFPGAEYDGKYLVLPSGE---LHIREVGPEDGYKSYQCRTKHRLTGET 192
Query: 174 TSSR----------VKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRV 223
S + P + L + + G K
Sbjct: 193 RLSATKGRLVITEPISSSAPRTPALVQKPLELMVAHTISLLCPAQGFPAPSFRWYKFIEG 252
Query: 224 VQSDDRFKFTVLDDYIIIF-----IKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPG 278
VL+D + IK+ ED+G Y ++NS G S + +T
Sbjct: 253 TTRKQAV---VLNDRVKQVSGTLIIKDAVVEDSGKYLCVVNNSVGGESVETVLTVTAPLS 309
Query: 279 PPIGPLDVSEITKHTCTLH 297
I P +
Sbjct: 310 AKIDPPTQTVDFGRPAVFT 328
Score = 89.6 bits (222), Expect = 1e-18
Identities = 43/259 (16%), Positives = 68/259 (26%), Gaps = 37/259 (14%)
Query: 1670 IAVNAIGKSEPSICTTPVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEA---TGTPV 1726
+A N G SI + V + + + V G ++C V
Sbjct: 83 LARNQFG----SIISRDVHV---RAVVAQYYEADVNKEHVIRGNSAVIKCLIPSFVADFV 135
Query: 1727 PKCRWLRNGRE-----ISSGARYRVETAGGVFRLHFNEVTDVDN-GDYTCEAYNSVGFAH 1780
W + E +Y V +G LH EV D Y C + +
Sbjct: 136 EVVSWHTDEEENYFPGAEYDGKYLVLPSGE---LHIREVGPEDGYKSYQCRTKHRLTGET 192
Query: 1781 TSSR----------VKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRV 1830
S + P + L + + G K
Sbjct: 193 RLSATKGRLVITEPISSSAPRTPALVQKPLELMVAHTISLLCPAQGFPAPSFRWYKFIEG 252
Query: 1831 VQSDDRFKFTVLDDYIIIF-----IKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPG 1885
VL+D + IK+ ED+G Y ++NS G S + +T
Sbjct: 253 TTRKQAV---VLNDRVKQVSGTLIIKDAVVEDSGKYLCVVNNSVGGESVETVLTVTAPLS 309
Query: 1886 PPIGPLDVSEITKHTCTLH 1904
I P +
Sbjct: 310 AKIDPPTQTVDFGRPAVFT 328
Score = 89.2 bits (221), Expect = 2e-18
Identities = 41/223 (18%), Positives = 74/223 (33%), Gaps = 31/223 (13%)
Query: 479 KAPEIIV-PLRNANAIQNHNAQFQCTITGCPKPTISWLK--GSREITPSARHHIFAEGDT 535
K P + P + + A+ +C +G P P I W++ G+ I ++G
Sbjct: 2 KGPVFLKEPTNRIDFSNSTGAEIECKASGNPMPEIIWIRSDGTAVGDVPGLRQISSDG-- 59
Query: 536 YTLIINSVYG------VDADEYVCRAVNKGG-VKSTKAELIIMTAPKFNVPPRFRDTAYF 588
L+ V A Y C A N+ G + S + + A + +
Sbjct: 60 -KLVFPPFRAEDYRQEVHAQVYACLARNQFGSIISRDVHVRAVVAQYYEADVN---KEHV 115
Query: 589 DKGENVVVK---IPFTGYPKPKITWYRDNEVIESGGHFHVETSERHAI-----LTIRDAS 640
+G + V+K F ++W+ D E E ++ + L IR+
Sbjct: 116 IRGNSAVIKCLIPSFVADFVEVVSWHTDEEENYFP---GAEYDGKYLVLPSGELHIREVG 172
Query: 641 NVDT-APYRVVAENDLGMD---SAIVKIQISDRPDPPQFPTVE 679
D Y+ ++ L + SA + P P
Sbjct: 173 PEDGYKSYQCRTKHRLTGETRLSATKGRLVITEPISSSAPRTP 215
Score = 86.1 bits (213), Expect = 2e-17
Identities = 28/154 (18%), Positives = 50/154 (32%), Gaps = 6/154 (3%)
Query: 2056 EFRVYAQNEAGLSLPSSAS-NSVQIKDPMAAKAPEIIVPL-RNANAIQNHNAQFQCTITG 2113
++ ++ SA+ + I +P+++ AP + + + H C G
Sbjct: 179 SYQCRTKHRLTGETRLSATKGRLVITEPISSSAPRTPALVQKPLELMVAHTISLLCPAQG 238
Query: 2114 CPKPTISWLKGSREITPSARHHIFAEGDTY--TLIINSVYGVDADEYVCRAVNKGGVKST 2171
P P+ W K T + TLII D+ +Y+C N G +S
Sbjct: 239 FPAPSFRWYKFIEGTTRKQAVVLNDRVKQVSGTLIIKDAVVEDSGKYLCVVNNSVGGESV 298
Query: 2172 KAELIIMTAPKFNVPPRFRDTAYFESDVVVVVCV 2205
+ L + + P V C
Sbjct: 299 ETVLTVTAPLSAKIDP--PTQTVDFGRPAVFTCQ 330
Score = 83.8 bits (207), Expect = 9e-17
Identities = 24/119 (20%), Positives = 38/119 (31%), Gaps = 18/119 (15%)
Query: 63 IAVNAIGKSEPSICTTPVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKC 122
+ N++G T V + V G+ C+ TG P+
Sbjct: 288 VVNNSVGGESVETVLT-VT-------APLSAKIDPPTQTVDFGRPAVFTCQYTGNPIKTV 339
Query: 123 RWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIG 181
W+++G+ I L V D G Y C N A S+ +K+G
Sbjct: 340 SWMKDGKAIGHSES----------VLRIESVKKEDKGMYQCFVRNDRESAEASAELKLG 388
Score = 66.5 bits (162), Expect = 4e-11
Identities = 25/129 (19%), Positives = 44/129 (34%), Gaps = 15/129 (11%)
Query: 2086 KAPEIIV-PLRNANAIQNHNAQFQCTITGCPKPTISWLK--GSREITPSARHHIFAEGDT 2142
K P + P + + A+ +C +G P P I W++ G+ I ++G
Sbjct: 2 KGPVFLKEPTNRIDFSNSTGAEIECKASGNPMPEIIWIRSDGTAVGDVPGLRQISSDG-- 59
Query: 2143 YTLIINSVYG------VDADEYVCRAVNKGG-VKSTKAELIIMTAPKFNVPPRFRDTAYF 2195
L+ V A Y C A N+ G + S + + A +
Sbjct: 60 -KLVFPPFRAEDYRQEVHAQVYACLARNQFGSIISRDVHVRAVVAQYYEADV--NKEHVI 116
Query: 2196 ESDVVVVVC 2204
+ V+ C
Sbjct: 117 RGNSAVIKC 125
Score = 64.6 bits (157), Expect = 2e-10
Identities = 30/155 (19%), Positives = 54/155 (34%), Gaps = 24/155 (15%)
Query: 2061 AQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTI---TGCPKP 2117
A+N+ G S S V ++ A A + + I+ ++A +C I
Sbjct: 84 ARNQFG----SIISRDVHVR---AVVAQYYEADVNKEHVIRGNSAVIKCLIPSFVADFVE 136
Query: 2118 TISWLKGSRE-----ITPSARHHIFAEGDTYTLIINSVYGVDAD-EYVCRAVNKGG---V 2168
+SW E ++ + G L I V D Y CR ++
Sbjct: 137 VVSWHTDEEENYFPGAEYDGKYLVLPSG---ELHIREVGPEDGYKSYQCRTKHRLTGETR 193
Query: 2169 KSTKAELIIMTAPKFNVPPRFRDTAYFESDVVVVV 2203
S +++T P + PR A + + ++V
Sbjct: 194 LSATKGRLVITEPISSSAPRT--PALVQKPLELMV 226
Score = 57.6 bits (139), Expect = 3e-08
Identities = 55/414 (13%), Positives = 101/414 (24%), Gaps = 73/414 (17%)
Query: 1134 APKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQTI 1193
P + + + I SG P P IW + D + S + +
Sbjct: 3 GPVFLKEPT-NRIDFSNSTGAEIECKASGNPMPEIIWIRSDGTAVGDVPGLRQISSDGKL 61
Query: 1194 Y----RNKSAKRATDSGSYTIQLVNTVGS-DSASCKVYVVDKPSPPQGPLDVSDITPESC 1248
R + ++ + Y N GS S V V I S
Sbjct: 62 VFPPFRAEDYRQEVHAQVYACLARNQFGSIISRDVHVRAVVAQYYEADVNKEHVIRGNSA 121
Query: 1249 SLSWKPPLDDGGSPITNYVVEKYESATGFWSKLSS--FVRSP----------AYDVFGLE 1296
+ P + E F ++ P D +
Sbjct: 122 VIKCLIP-SFVADFVEVVSWHTDEEENYFPGAEYDGKYLVLPSGELHIREVGPEDGYK-- 178
Query: 1297 TNRQYRFRVRAENQYGVSEPLELDNSITAKFPFTVPDPPGQPQIVDWDT-----NNATL- 1350
++ R +++ L P P +V + +L
Sbjct: 179 -----SYQCRTKHRLTGETRLSATKGRLVITEPISSSAPRTPALVQKPLELMVAHTISLL 233
Query: 1351 -----------MWDRPRTDGGSKIQGYKMLLKTPTGELPTTIW-SKIRPTSSTVY-CKDT 1397
W + + ++L ++ T+ S Y C
Sbjct: 234 CPAQGFPAPSFRWYK---FIEGTTRKQAVVLNDRVKQVSGTLIIKDAVVEDSGKYLC--V 288
Query: 1398 TMNSSNSEPGKQSGPVIVEEQPN---KPVMDLSGVRDITVKAGEDFSIHVPFMAFPQPAA 1454
NS E + V + P TV G + P
Sbjct: 289 VNNSVGGE--SVETVLTVTAPLSAKIDP-------PTQTVDFGRPAVFTCQYTGNPIKTV 339
Query: 1455 FWFANDSIIDDSDTRVHKQLTMNSASLVVKNSQRSDGGQYRLQLKNPAGFDTAT 1508
W + I S+ + L +++ ++ D G Y+ ++N A+
Sbjct: 340 SWMKDGKAIGHSE-----------SVLRIESVKKEDKGMYQCFVRNDRESAEAS 382
Score = 54.6 bits (131), Expect = 2e-07
Identities = 21/142 (14%), Positives = 47/142 (33%), Gaps = 12/142 (8%)
Query: 1108 VC-AVNAAGQGPWSSSSDIIMCCAPPC---APKITSDLSIRDMTVLAGEEFTITVPFSGR 1163
C + S++ + P AP+ + + + + ++ ++ P G
Sbjct: 181 QCRTKHRLTGETRLSATKGRLVITEPISSSAPRTPALVQ-KPLELMVAHTISLLCPAQGF 239
Query: 1164 PKPTPIWTVNGDEVSPDGRIKFETSENQTIYRNKSAK----RATDSGSYTIQLVNTVGSD 1219
P P+ W + + + ++ + + DSG Y + N+VG +
Sbjct: 240 PAPSFRWYKFIEGTTRKQAVVLN---DRVKQVSGTLIIKDAVVEDSGKYLCVVNNSVGGE 296
Query: 1220 SASCKVYVVDKPSPPQGPLDVS 1241
S + V S P +
Sbjct: 297 SVETVLTVTAPLSAKIDPPTQT 318
Score = 53.0 bits (127), Expect = 7e-07
Identities = 32/193 (16%), Positives = 65/193 (33%), Gaps = 17/193 (8%)
Query: 1324 TAKFPFTVPDPPGQPQ-IVDWDTNNATLMWDRPRTDGGSKIQGYKMLLKTPTGELPTTIW 1382
+A +P +V W T+ + DG + P+GEL I
Sbjct: 120 SAVIKCLIPSFVADFVEVVSWHTDEEENYFPGAEYDGKYLVL--------PSGEL--HI- 168
Query: 1383 SKIRPT-SSTVYCKDTTMNSSNSEPGKQSGPVIVEEQPN---KPVMDLSGVRDITVKAGE 1438
++ P Y T + + +V +P P + + +
Sbjct: 169 REVGPEDGYKSYQCRTKHRLTGETRLSATKGRLVITEPISSSAPRTPALVQKPLELMVAH 228
Query: 1439 DFSIHVPFMAFPQPAAFWF-ANDSIIDDSDTRVHKQLTMNSASLVVKNSQRSDGGQYRLQ 1497
S+ P FP P+ W+ + ++ ++ S +L++K++ D G+Y
Sbjct: 229 TISLLCPAQGFPAPSFRWYKFIEGTTRKQAVVLNDRVKQVSGTLIIKDAVVEDSGKYLCV 288
Query: 1498 LKNPAGFDTATLH 1510
+ N G ++
Sbjct: 289 VNNSVGGESVETV 301
Score = 45.3 bits (107), Expect = 2e-04
Identities = 19/95 (20%), Positives = 32/95 (33%), Gaps = 15/95 (15%)
Query: 1134 APKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSP-DGRIKFETSENQT 1192
D TV G T ++G P T W +G + + ++
Sbjct: 307 PLSAKIDP--PTQTVDFGRPAVFTCQYTGNPIKTVSWMKDGKAIGHSESVLRI------- 357
Query: 1193 IYRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYV 1227
+S K+ D G Y + N S AS ++ +
Sbjct: 358 ----ESVKKE-DKGMYQCFVRNDRESAEASAELKL 387
>3irg_B Obscurin-like protein 1; IG-like, titin, OBSL1, complex,
alternative splicing, ATP-binding, calcium,
calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens}
PDB: 3knb_B 2wp3_O* 2wwm_C 2wwk_O
Length = 107
Score = 115 bits (289), Expect = 3e-30
Identities = 26/105 (24%), Positives = 45/105 (42%)
Query: 470 VQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHI 529
++ P + R + A+ +C + G P P + W KG +++ S R
Sbjct: 3 MKASSGDQGSPPCFLRFPRPVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAASERLSF 62
Query: 530 FAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAP 574
A+G + L++ + DA YVCRA N G A + ++ P
Sbjct: 63 PADGAEHGLLLTAALPTDAGVYVCRARNAAGEAYAAAAVTVLEPP 107
Score = 115 bits (289), Expect = 3e-30
Identities = 26/105 (24%), Positives = 45/105 (42%)
Query: 2077 VQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHI 2136
++ P + R + A+ +C + G P P + W KG +++ S R
Sbjct: 3 MKASSGDQGSPPCFLRFPRPVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAASERLSF 62
Query: 2137 FAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAP 2181
A+G + L++ + DA YVCRA N G A + ++ P
Sbjct: 63 PADGAEHGLLLTAALPTDAGVYVCRARNAAGEAYAAAAVTVLEPP 107
Score = 109 bits (274), Expect = 3e-28
Identities = 28/106 (26%), Positives = 44/106 (41%)
Query: 79 PVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYR 138
P+K G P F+ + + V G L+C G P P W + G+++++ R
Sbjct: 2 PMKASSGDQGSPPCFLRFPRPVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAASERLS 61
Query: 139 VETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPP 184
G L D G Y C A N+ G A+ ++ V + PP
Sbjct: 62 FPADGAEHGLLLTAALPTDAGVYVCRARNAAGEAYAAAAVTVLEPP 107
Score = 109 bits (274), Expect = 3e-28
Identities = 28/106 (26%), Positives = 44/106 (41%)
Query: 1686 PVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYR 1745
P+K G P F+ + + V G L+C G P P W + G+++++ R
Sbjct: 2 PMKASSGDQGSPPCFLRFPRPVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAASERLS 61
Query: 1746 VETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPP 1791
G L D G Y C A N+ G A+ ++ V + PP
Sbjct: 62 FPADGAEHGLLLTAALPTDAGVYVCRARNAAGEAYAAAAVTVLEPP 107
Score = 73.6 bits (181), Expect = 2e-15
Identities = 19/99 (19%), Positives = 30/99 (30%), Gaps = 3/99 (3%)
Query: 572 TAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSERH 631
+ P F PR G +K G P P + W + + + +
Sbjct: 12 SPPCFLRFPR--PVRVVS-GAEAELKCVVLGEPPPVVVWEKGGQQLAASERLSFPADGAE 68
Query: 632 AILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQISDRP 670
L + A D Y A N G A + + + P
Sbjct: 69 HGLLLTAALPTDAGVYVCRARNAAGEAYAAAAVTVLEPP 107
Score = 70.1 bits (172), Expect = 2e-14
Identities = 27/115 (23%), Positives = 44/115 (38%), Gaps = 8/115 (6%)
Query: 1117 GPWSSSSDIIMCCAPPCAPKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDE 1176
GP +SS P R + V++G E + G P P +W G +
Sbjct: 1 GPMKASSG-----DQGSPPCFLRFP--RPVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQ 53
Query: 1177 VSPDGRIKFETSENQTIYRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYVVDKP 1231
++ R+ F + +A TD+G Y + N G A+ V V++ P
Sbjct: 54 LAASERLSFPADGAEHGLLLTAAL-PTDAGVYVCRARNAAGEAYAAAAVTVLEPP 107
Score = 63.6 bits (155), Expect = 4e-12
Identities = 22/103 (21%), Positives = 39/103 (37%)
Query: 175 SSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTV 234
+S G+PP R P + + G ++K G+ P V K G+ + + +R F
Sbjct: 5 ASSGDQGSPPCFLRFPRPVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAASERLSFPA 64
Query: 235 LDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLP 277
+ + DAG Y N++G + + P
Sbjct: 65 DGAEHGLLLTAALPTDAGVYVCRARNAAGEAYAAAAVTVLEPP 107
Score = 63.6 bits (155), Expect = 4e-12
Identities = 22/103 (21%), Positives = 39/103 (37%)
Query: 1782 SSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTV 1841
+S G+PP R P + + G ++K G+ P V K G+ + + +R F
Sbjct: 5 ASSGDQGSPPCFLRFPRPVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAASERLSFPA 64
Query: 1842 LDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLP 1884
+ + DAG Y N++G + + P
Sbjct: 65 DGAEHGLLLTAALPTDAGVYVCRARNAAGEAYAAAAVTVLEPP 107
Score = 45.5 bits (108), Expect = 9e-06
Identities = 21/100 (21%), Positives = 38/100 (38%), Gaps = 4/100 (4%)
Query: 1411 GPVIVE--EQPNKPVMDLSGVRDITVKAGEDFSIHVPFMAFPQPAAFWFANDSIIDDSDT 1468
GP+ +Q + P L R + V +G + + + P P W + S+
Sbjct: 1 GPMKASSGDQGSPPCF-LRFPRPVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAASE- 58
Query: 1469 RVHKQLTMNSASLVVKNSQRSDGGQYRLQLKNPAGFDTAT 1508
R+ L++ + +D G Y + +N AG A
Sbjct: 59 RLSFPADGAEHGLLLTAALPTDAGVYVCRARNAAGEAYAA 98
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell
adhesion, transmembrane, disulfide bond, alternative
splicing; HET: NAG; 1.95A {Rattus norvegicus}
Length = 190
Score = 118 bits (297), Expect = 3e-30
Identities = 37/195 (18%), Positives = 65/195 (33%), Gaps = 17/195 (8%)
Query: 480 APEIIVPLRNANAIQNHNAQFQCTITGCPKPTIS--WLKGSREITPSARHHIFAEGDTYT 537
P I+ QC +T + W K E+T + ++
Sbjct: 3 EPRIVTSEEVIIRDSLLPVTLQCNLTSSSHTLMYSYWTKNGVELTATRKNA-----SNME 57
Query: 538 LIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVK 597
IN D+ EY C + A + + AP R + ++G++ ++
Sbjct: 58 YRINKPRAEDSGEYHCVY-HFVSAPKANATIEVKAAPDITGHKR---SENKNEGQDAMMY 113
Query: 598 IPFTGYPKPKITWYRDNEVI-----ESGGHFHVETSERHAILTIRD-ASNVDTAPYRVVA 651
GYP P+ W + + S G F + E + L I + D Y A
Sbjct: 114 CKSVGYPHPEWMWRKKENGVFEEISNSSGRFFIINKENYTELNIVNLQITEDPGEYECNA 173
Query: 652 ENDLGMDSAIVKIQI 666
N +G S +++
Sbjct: 174 TNSIGSASVSTVLRV 188
Score = 113 bits (284), Expect = 2e-28
Identities = 39/192 (20%), Positives = 73/192 (38%), Gaps = 14/192 (7%)
Query: 90 KPDFIVPLKDLVVPLGKLLTLQCEATGTPVPK--CRWLRNGREISSGARYRVETAGGVFR 147
+P + + ++ +TLQC T + W +NG E+++ +
Sbjct: 3 EPRIVTSEEVIIRDSLLPVTLQCNLTSSSHTLMYSYWTKNGVELTATRKNASNM-----E 57
Query: 148 LHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFY 207
N+ D+G+Y C + V ++ +++ P I + EG + +
Sbjct: 58 YRINKPRAEDSGEYHCVY-HFVSAPKANATIEVKAAPDITGHKRSENKNEGQDAMMYCKS 116
Query: 208 AGDQPMEVSLTKNGRVV-----QSDDRFKFTVLDDYIIIFIKEIR-KEDAGDYTVNLSNS 261
G E K V S RF ++Y + I ++ ED G+Y N +NS
Sbjct: 117 VGYPHPEWMWRKKENGVFEEISNSSGRFFIINKENYTELNIVNLQITEDPGEYECNATNS 176
Query: 262 SGSVSGTFTINI 273
GS S + + +
Sbjct: 177 IGSASVSTVLRV 188
Score = 113 bits (284), Expect = 2e-28
Identities = 39/192 (20%), Positives = 73/192 (38%), Gaps = 14/192 (7%)
Query: 1697 KPDFIVPLKDLVVPLGKLLTLQCEATGTPVPK--CRWLRNGREISSGARYRVETAGGVFR 1754
+P + + ++ +TLQC T + W +NG E+++ +
Sbjct: 3 EPRIVTSEEVIIRDSLLPVTLQCNLTSSSHTLMYSYWTKNGVELTATRKNASNM-----E 57
Query: 1755 LHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFY 1814
N+ D+G+Y C + V ++ +++ P I + EG + +
Sbjct: 58 YRINKPRAEDSGEYHCVY-HFVSAPKANATIEVKAAPDITGHKRSENKNEGQDAMMYCKS 116
Query: 1815 AGDQPMEVSLTKNGRVV-----QSDDRFKFTVLDDYIIIFIKEIR-KEDAGDYTVNLSNS 1868
G E K V S RF ++Y + I ++ ED G+Y N +NS
Sbjct: 117 VGYPHPEWMWRKKENGVFEEISNSSGRFFIINKENYTELNIVNLQITEDPGEYECNATNS 176
Query: 1869 SGSVSGTFTINI 1880
GS S + + +
Sbjct: 177 IGSASVSTVLRV 188
Score = 80.3 bits (198), Expect = 6e-17
Identities = 21/120 (17%), Positives = 34/120 (28%), Gaps = 10/120 (8%)
Query: 2087 APEIIVPLRNANAIQNHNAQFQCTITGCPKPTIS--WLKGSREITPSARHHIFAEGDTYT 2144
P I+ QC +T + W K E+T + ++
Sbjct: 3 EPRIVTSEEVIIRDSLLPVTLQCNLTSSSHTLMYSYWTKNGVELTATRKNA-----SNME 57
Query: 2145 LIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPRFRDTAYFESDVVVVVC 2204
IN D+ EY C + A + + AP R E ++ C
Sbjct: 58 YRINKPRAEDSGEYHCVY-HFVSAPKANATIEVKAAPDITGHK--RSENKNEGQDAMMYC 114
Score = 78.7 bits (194), Expect = 2e-16
Identities = 22/98 (22%), Positives = 40/98 (40%), Gaps = 6/98 (6%)
Query: 89 EKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREI-----SSGARYRVETAG 143
PD + G+ + C++ G P P+ W + + +S R+ +
Sbjct: 91 AAPDITGHKRSENKNEGQDAMMYCKSVGYPHPEWMWRKKENGVFEEISNSSGRFFIINKE 150
Query: 144 GVFRLH-FNEVTDVDNGDYTCEAYNSVGFAHTSSRVKI 180
L+ N D G+Y C A NS+G A S+ +++
Sbjct: 151 NYTELNIVNLQITEDPGEYECNATNSIGSASVSTVLRV 188
Score = 78.7 bits (194), Expect = 2e-16
Identities = 22/98 (22%), Positives = 40/98 (40%), Gaps = 6/98 (6%)
Query: 1696 EKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREI-----SSGARYRVETAG 1750
PD + G+ + C++ G P P+ W + + +S R+ +
Sbjct: 91 AAPDITGHKRSENKNEGQDAMMYCKSVGYPHPEWMWRKKENGVFEEISNSSGRFFIINKE 150
Query: 1751 GVFRLH-FNEVTDVDNGDYTCEAYNSVGFAHTSSRVKI 1787
L+ N D G+Y C A NS+G A S+ +++
Sbjct: 151 NYTELNIVNLQITEDPGEYECNATNSIGSASVSTVLRV 188
Score = 78.4 bits (193), Expect = 3e-16
Identities = 27/112 (24%), Positives = 42/112 (37%), Gaps = 11/112 (9%)
Query: 465 SASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITP- 523
A+ ++++K P+I R+ N + +A C G P P W K +
Sbjct: 82 KANATIEVKAA-----PDITGHKRSENKNEGQDAMMYCKSVGYPHPEWMWRKKENGVFEE 136
Query: 524 ----SARHHIFAEGDTYTLIINSVYGV-DADEYVCRAVNKGGVKSTKAELII 570
S R I + + L I ++ D EY C A N G S L +
Sbjct: 137 ISNSSGRFFIINKENYTELNIVNLQITEDPGEYECNATNSIGSASVSTVLRV 188
Score = 78.4 bits (193), Expect = 3e-16
Identities = 27/112 (24%), Positives = 42/112 (37%), Gaps = 11/112 (9%)
Query: 2072 SASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITP- 2130
A+ ++++K P+I R+ N + +A C G P P W K +
Sbjct: 82 KANATIEVKAA-----PDITGHKRSENKNEGQDAMMYCKSVGYPHPEWMWRKKENGVFEE 136
Query: 2131 ----SARHHIFAEGDTYTLIINSVYGV-DADEYVCRAVNKGGVKSTKAELII 2177
S R I + + L I ++ D EY C A N G S L +
Sbjct: 137 ISNSSGRFFIINKENYTELNIVNLQITEDPGEYECNATNSIGSASVSTVLRV 188
Score = 56.4 bits (136), Expect = 1e-08
Identities = 25/99 (25%), Positives = 36/99 (36%), Gaps = 7/99 (7%)
Query: 1134 APKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPD-----GRIKFETS 1188
AP IT R G++ + G P P +W + V + GR
Sbjct: 92 APDITGHK--RSENKNEGQDAMMYCKSVGYPHPEWMWRKKENGVFEEISNSSGRFFIINK 149
Query: 1189 ENQTIYRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYV 1227
EN T + + D G Y N++GS S S + V
Sbjct: 150 ENYTELNIVNLQITEDPGEYECNATNSIGSASVSTVLRV 188
Score = 49.5 bits (118), Expect = 2e-06
Identities = 18/110 (16%), Positives = 33/110 (30%), Gaps = 11/110 (10%)
Query: 1134 APKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTP--IWTVNGDEVSPDGRIKFETSENQ 1191
P+I + + + T+ + WT NG E++ +
Sbjct: 3 EPRIVTSEE--VIIRDSLLPVTLQCNLTSSSHTLMYSYWTKNGVELTATRKNASNME--- 57
Query: 1192 TIYRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYVVDKPSPPQGPLDVS 1241
YR + DSG Y + V + A+ + V P +
Sbjct: 58 --YRINKPRA-EDSGEYHCV-YHFVSAPKANATIEVKAAPDITGHKRSEN 103
Score = 41.0 bits (96), Expect = 0.001
Identities = 17/84 (20%), Positives = 30/84 (35%), Gaps = 5/84 (5%)
Query: 1430 RDITVKAGEDFSIHVPFMAFPQPAAFWFANDSIIDD----SDTRVHKQLTMNSASLVVKN 1485
R G+D ++ + +P P W ++ + + S R N L + N
Sbjct: 100 RSENKNEGQDAMMYCKSVGYPHPEWMWRKKENGVFEEISNSSGRFFIINKENYTELNIVN 159
Query: 1486 SQ-RSDGGQYRLQLKNPAGFDTAT 1508
Q D G+Y N G + +
Sbjct: 160 LQITEDPGEYECNATNSIGSASVS 183
Score = 32.9 bits (75), Expect = 0.80
Identities = 10/88 (11%), Positives = 25/88 (28%), Gaps = 19/88 (21%)
Query: 1409 QSGPVIVEEQPNKPVMDLSGVRDITVKAGEDFSIHVPFMAFPQPA--AFWFANDSIIDDS 1466
Q+ P IV + I + ++ + ++W N + +
Sbjct: 1 QNEPRIVTSE-----------EVIIRDSLLPVTLQCNLTSSSHTLMYSYWTKNGVELTAT 49
Query: 1467 DTRVHKQLTMNSASLVVKNSQRSDGGQY 1494
++ + + D G+Y
Sbjct: 50 RKNA------SNMEYRINKPRAEDSGEY 71
>1x5x_A Fibronectin type-III domain containing protein 3A; structural
genomics, KIAA0970, NPPSFA; NMR {Homo sapiens} SCOP:
b.1.2.1
Length = 109
Score = 115 bits (289), Expect = 4e-30
Identities = 25/100 (25%), Positives = 39/100 (39%), Gaps = 1/100 (1%)
Query: 667 SDRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSWIRV-GNTRFT 725
S P P P + G L+L W P +YI+E E + +
Sbjct: 5 SSGPSMPASPVLTKAGITWLSLQWSKPSGTPSDEGISYILEMEEETSGYGFKPKYDGEDL 64
Query: 726 TMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKDT 765
+ L +Y+F+V A N G+S+PS + T D+
Sbjct: 65 AYTVKNLRRSTKYKFKVIAYNSEGKSNPSEVVEFTTCPDS 104
Score = 110 bits (277), Expect = 2e-28
Identities = 20/108 (18%), Positives = 36/108 (33%), Gaps = 4/108 (3%)
Query: 275 GLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHDT 334
P P +++ +L W+ P + Y++E + + + D
Sbjct: 6 SGPSMP-ASPVLTKAGITWLSLQWSKPSGTPSDEGISYILEMEEETSGYGFKPKYDGEDL 64
Query: 335 TFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPG 382
+ V+ L +Y F V+A N G P E + D G
Sbjct: 65 AYTVKNLRRSTKYKFKVIAYNSEGKSNPSEVVEFTTCP---DSGPSSG 109
Score = 110 bits (277), Expect = 2e-28
Identities = 20/108 (18%), Positives = 36/108 (33%), Gaps = 4/108 (3%)
Query: 1882 GLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHDT 1941
P P +++ +L W+ P + Y++E + + + D
Sbjct: 6 SGPSMP-ASPVLTKAGITWLSLQWSKPSGTPSDEGISYILEMEEETSGYGFKPKYDGEDL 64
Query: 1942 TFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPG 1989
+ V+ L +Y F V+A N G P E + D G
Sbjct: 65 AYTVKNLRRSTKYKFKVIAYNSEGKSNPSEVVEFTTCP---DSGPSSG 109
Score = 108 bits (273), Expect = 6e-28
Identities = 27/110 (24%), Positives = 41/110 (37%), Gaps = 1/110 (0%)
Query: 371 AKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVA 430
S PS P PV+T+ G +++L W KP Y ++ E S +
Sbjct: 1 GSSGSSGPSMPASPVLTKAGITWLSLQWSKPSGTPSDEGISYILEMEEETSGYGFKPKYD 60
Query: 431 ICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKA 480
+ + NL +Y+F+V A N G S PS D +
Sbjct: 61 GEDLA-YTVKNLRRSTKYKFKVIAYNSEGKSNPSEVVEFTTCPDSGPSSG 109
Score = 108 bits (273), Expect = 6e-28
Identities = 27/110 (24%), Positives = 41/110 (37%), Gaps = 1/110 (0%)
Query: 1978 AKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVA 2037
S PS P PV+T+ G +++L W KP Y ++ E S +
Sbjct: 1 GSSGSSGPSMPASPVLTKAGITWLSLQWSKPSGTPSDEGISYILEMEEETSGYGFKPKYD 60
Query: 2038 ICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKA 2087
+ + NL +Y+F+V A N G S PS D +
Sbjct: 61 GEDLA-YTVKNLRRSTKYKFKVIAYNSEGKSNPSEVVEFTTCPDSGPSSG 109
Score = 108 bits (271), Expect = 1e-27
Identities = 28/110 (25%), Positives = 41/110 (37%), Gaps = 4/110 (3%)
Query: 1227 VVDKPSPPQGPLDVSDITPESCSLSWKPPLDDGGSPITNYVVEKYESATGFWSKLSSFVR 1286
PS P P+ ++ SL W P +Y++E E +G+ K
Sbjct: 4 GSSGPSMPASPV-LTKAGITWLSLQWSKPSGTPSDEGISYILEMEEETSGYGFKPKYDGE 62
Query: 1287 SPAYDVFGLETNRQYRFRVRAENQYGVSEPLELDNSITAKFPFTVPDPPG 1336
AY V L + +Y+F+V A N G S P E+ T G
Sbjct: 63 DLAYTVKNLRRSTKYKFKVIAYNSEGKSNPSEVVEFTTCPDS---GPSSG 109
Score = 107 bits (270), Expect = 2e-27
Identities = 24/105 (22%), Positives = 42/105 (40%), Gaps = 3/105 (2%)
Query: 902 PHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTKVSSYVTTPFVR 961
P P + + L+L W+ P E +Y++E ++ S K
Sbjct: 8 PSMPASPVLTKAGITWLSLQWSKPSGTPSDEGISYILEMEEETSGYGFKPKYDGEDLAYT 67
Query: 962 VRNLAIGSTYEFRVMAENQYGLSKPALTIDPIKAKHPFDVPGAPG 1006
V+NL + Y+F+V+A N G S P+ ++ D + G
Sbjct: 68 VKNLRRSTKYKFKVIAYNSEGKSNPSEVVEFTTCP---DSGPSSG 109
Score = 102 bits (256), Expect = 1e-25
Identities = 24/136 (17%), Positives = 39/136 (28%), Gaps = 33/136 (24%)
Query: 1000 DVPGAPGAPKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDT 1059
P P +P + +SL WSKP YI+E + K D
Sbjct: 6 SGPSMPASPVLTKAGITWLSLQWSKPSGTPSDEGISYILEMEEETSGYGFKPK-YDGEDL 64
Query: 1060 SLKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPW 1119
+ V +L + +Y+F+V A N+ G+
Sbjct: 65 AYT--------------------------------VKNLRRSTKYKFKVIAYNSEGKSNP 92
Query: 1120 SSSSDIIMCCAPPCAP 1135
S + C +
Sbjct: 93 SEVVEFTTCPDSGPSS 108
Score = 84.3 bits (209), Expect = 3e-19
Identities = 24/133 (18%), Positives = 38/133 (28%), Gaps = 46/133 (34%)
Query: 1559 VDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEG 1618
+ +SL WSKP YI+E + K
Sbjct: 17 TKAGITWLSLQWSKPSGTPSDEGISYILEMEEETSGYGFK-------------------- 56
Query: 1619 KSIGSERGSTAQFLEREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKS 1678
Y+ + +++V NL Y+F++IA N+ GKS
Sbjct: 57 --------------------------PKYDGEDLAYTVKNLRRSTKYKFKVIAYNSEGKS 90
Query: 1679 EPSICTTPVKICE 1691
PS +
Sbjct: 91 NPSEVVEFTTCPD 103
Score = 72.0 bits (177), Expect = 6e-15
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Query: 22 YIIERREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPSICTTPVK 81
YI+E E K Y+ + +++V NL Y+F++IA N+ GKS PS
Sbjct: 42 YILEMEEETSGYGFK-PKYDGEDLAYTVKNLRRSTKYKFKVIAYNSEGKSNPSEVVEFTT 100
Query: 82 ICE 84
+
Sbjct: 101 CPD 103
Score = 57.0 bits (138), Expect = 1e-09
Identities = 13/105 (12%), Positives = 27/105 (25%), Gaps = 14/105 (13%)
Query: 1330 TVPDPPGQPQIVDWDTNNATLMWDRPRTDGGSKIQGYKMLLKTPTGELPTTIWSKIRPTS 1389
+ P P P + +L W +P + Y + ++ T +
Sbjct: 6 SGPSMPASPVLTKAGITWLSLQWSKPSGTPSDEGISYILEMEEETSGYGFKPKYDGEDLA 65
Query: 1390 STVYCKDTTMNSS------------NSEPGKQSGPVIVEEQPNKP 1422
TV K+ ++ S P + +
Sbjct: 66 YTV--KNLRRSTKYKFKVIAYNSEGKSNPSEVVEFTTCPDSGPSS 108
>1uey_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, NG-CAM
related cell adhesion molecule, fibronectin type III
domain, structural genomics; NMR {Homo sapiens} SCOP:
b.1.2.1
Length = 127
Score = 115 bits (289), Expect = 6e-30
Identities = 34/110 (30%), Positives = 44/110 (40%), Gaps = 4/110 (3%)
Query: 658 DSAIVKIQISDRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSWI 717
S + D P+PP + D S+ L W D S IT +I+E + +
Sbjct: 5 SSGPTPAPVYDVPNPPFDLELTDQLDKSVQLSWTPGD-DNNSPITKFIIEYEDAMHKPGL 63
Query: 718 RVGNTRF---TTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKD 764
T T A LSP Y FRV A N G+S PS S+ TK
Sbjct: 64 WHHQTEVSGTQTTAQLNLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKA 113
Score = 107 bits (268), Expect = 5e-27
Identities = 34/125 (27%), Positives = 45/125 (36%), Gaps = 9/125 (7%)
Query: 1216 VGSDSASCKVYVVDKPSPPQGPLDVSDITPESCSLSWKPPLDDGGSPITNYVVEKYE--S 1273
S V D P+PP ++D +S LSW P DD SPIT +++E +
Sbjct: 2 SSGSSGPTPAPVYDVPNPPFDLE-LTDQLDKSVQLSWTPG-DDNNSPITKFIIEYEDAMH 59
Query: 1274 ATGFWSKLSSFVRSPAYDVFGLETNRQYRFRVRAENQYGVSEPLELDNSITAKFPFTVPD 1333
G W + + L Y FRV A N G S P E K
Sbjct: 60 KPGLWHHQTEVSGTQTTAQLNLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTK-----AS 114
Query: 1334 PPGQP 1338
P +
Sbjct: 115 EPDKN 119
Score = 103 bits (260), Expect = 5e-26
Identities = 30/127 (23%), Positives = 45/127 (35%), Gaps = 4/127 (3%)
Query: 262 SGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISM 321
S SG + +P PP L++++ + L W P D +T +++E D
Sbjct: 2 SSGSSGPTPAPVYDVPNPP-FDLELTDQLDKSVQLSWTPG-DDNNSPITKFIIEYEDAMH 59
Query: 322 P--HWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPS 379
W + T L+ Y F VMAVN G P E K+ +
Sbjct: 60 KPGLWHHQTEVSGTQTTAQLNLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKN 119
Query: 380 PPGIPVV 386
P P
Sbjct: 120 PTSGPSS 126
Score = 103 bits (260), Expect = 5e-26
Identities = 30/127 (23%), Positives = 45/127 (35%), Gaps = 4/127 (3%)
Query: 1869 SGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISM 1928
S SG + +P PP L++++ + L W P D +T +++E D
Sbjct: 2 SSGSSGPTPAPVYDVPNPP-FDLELTDQLDKSVQLSWTPG-DDNNSPITKFIIEYEDAMH 59
Query: 1929 P--HWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPS 1986
W + T L+ Y F VMAVN G P E K+ +
Sbjct: 60 KPGLWHHQTEVSGTQTTAQLNLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKN 119
Query: 1987 PPGIPVV 1993
P P
Sbjct: 120 PTSGPSS 126
Score = 102 bits (255), Expect = 2e-25
Identities = 33/116 (28%), Positives = 48/116 (41%), Gaps = 4/116 (3%)
Query: 898 VLDRPHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNST--VWTKVSSYV 955
V D P+PP +L + S+ L WTP D S IT +++E +D +W +
Sbjct: 13 VYDVPNPPFDLELTDQLDKSVQLSWTPGDD-NNSPITKFIIEYEDAMHKPGLWHHQTEVS 71
Query: 956 TTPFVRVRNLAIGSTYEFRVMAENQYGLSKPALTIDPIKAKHPFDVPGAPGAPKGV 1011
T NL+ Y FRVMA N G S P+ + K + P +
Sbjct: 72 GTQTTAQLNLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTK-ASEPDKNPTSGPSS 126
Score = 99.0 bits (247), Expect = 3e-24
Identities = 35/109 (32%), Positives = 43/109 (39%), Gaps = 2/109 (1%)
Query: 374 PYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICA 433
YD P+PP +T V LSW P DD S I + I+ + + +
Sbjct: 13 VYDVPNPPFDLELTDQLDKSVQLSW-TPGDDNNSPITKFIIEYEDAMHKPGLWHHQTEVS 71
Query: 434 PSQIN-IPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAP 481
+Q NL Y FRV A N G SLPS AS K K P
Sbjct: 72 GTQTTAQLNLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNP 120
Score = 99.0 bits (247), Expect = 3e-24
Identities = 35/109 (32%), Positives = 43/109 (39%), Gaps = 2/109 (1%)
Query: 1981 PYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICA 2040
YD P+PP +T V LSW P DD S I + I+ + + +
Sbjct: 13 VYDVPNPPFDLELTDQLDKSVQLSW-TPGDDNNSPITKFIIEYEDAMHKPGLWHHQTEVS 71
Query: 2041 PSQIN-IPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAP 2088
+Q NL Y FRV A N G SLPS AS K K P
Sbjct: 72 GTQTTAQLNLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNP 120
Score = 92.4 bits (230), Expect = 6e-22
Identities = 28/138 (20%), Positives = 43/138 (31%), Gaps = 34/138 (24%)
Query: 998 PFDVPGAPGAPKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIP 1057
+DVP P + D + S+ L W P D SPI ++I+E + +
Sbjct: 13 VYDVPNPPFDLELTDQLDKSVQLSW-TPGDDNNSPITKFIIEYEDAMHKPGLWHHQTEVS 71
Query: 1058 DTSLKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQG 1117
T +L Y FRV AVN+ G+
Sbjct: 72 GTQT-------------------------------TAQLNLSPYVNYSFRVMAVNSIGKS 100
Query: 1118 PWSSSSDIIMCCAPPCAP 1135
S +S+ + P
Sbjct: 101 LPSEASEQYL--TKASEP 116
Score = 77.8 bits (192), Expect = 8e-17
Identities = 28/140 (20%), Positives = 43/140 (30%), Gaps = 45/140 (32%)
Query: 1559 VDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEG 1618
D + S+ L W P D SPI ++I+E + + T
Sbjct: 26 TDQLDKSVQLSW-TPGDDNNSPITKFIIEYEDAMHKPGLWHHQTEVSGTQ---------- 74
Query: 1619 KSIGSERGSTAQFLEREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKS 1678
+ + LNL +Y FR++AVN+IGKS
Sbjct: 75 ----------------------------------TTAQLNLSPYVNYSFRVMAVNSIGKS 100
Query: 1679 EPSICTTPVKICEFVGGEKP 1698
PS + + P
Sbjct: 101 LPSEASEQYLTKASEPDKNP 120
Score = 62.4 bits (152), Expect = 2e-11
Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
Query: 22 YIIERREVGGAIWLKCNDYNVLECSFS-VLNLVEGNDYEFRIIAVNAIGKSEPSICTTPV 80
+IIE + L + V + LNL +Y FR++AVN+IGKS PS +
Sbjct: 50 FIIEYEDAMHKPGLWHHQTEVSGTQTTAQLNLSPYVNYSFRVMAVNSIGKSLPSEASEQY 109
Query: 81 KICEFVGGEKP 91
+ P
Sbjct: 110 LTKASEPDKNP 120
Score = 49.7 bits (119), Expect = 6e-07
Identities = 20/131 (15%), Positives = 37/131 (28%), Gaps = 21/131 (16%)
Query: 1312 GVSEPLELDNSITAKFPFTVPDPPGQPQIVDWDTNNATLMWDRPRTDGGSKIQGYKMLLK 1371
G S P + VP+PP ++ D + L W P D S I + + +
Sbjct: 4 GSSGPTPAP-------VYDVPNPPFDLELTDQLDKSVQLSW-TPGDDNNSPITKFIIEYE 55
Query: 1372 TPTGELPTTIWSKIRPTSSTVYCKDTTMNSS------------NSEPGKQSGPVIVEEQ- 1418
+ + T + + + S P + S + +
Sbjct: 56 DAMHKPGLWHHQTEVSGTQTTAQLNLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASE 115
Query: 1419 PNKPVMDLSGV 1429
P+K
Sbjct: 116 PDKNPTSGPSS 126
>2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY
docking, cell adhesion, structural protein; NMR {Homo
sapiens}
Length = 201
Score = 118 bits (296), Expect = 6e-30
Identities = 32/203 (15%), Positives = 72/203 (35%), Gaps = 20/203 (9%)
Query: 278 GPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPH-WICISTTCHDTTF 336
GP + + ++ + WN P+ ++ Y++ R + W + H ++
Sbjct: 2 GPVEVFITETPSQPNSHPIQWNAPQ---PSHISKYILRWRPKNSVGRWKEATIPGHLNSY 58
Query: 337 IVQGLTEGQEYLFHVMAVNENGMGPPLEGI------------NPIKAKSPYDKPSPPGIP 384
++GL G Y ++++ + G N + ++ P
Sbjct: 59 TIKGLKPGVVYEGQLISIQQYGHQEVTRFDFTTTSTSTPVTSNTVTGETTPFSPLVATSE 118
Query: 385 VVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIE 444
VT++ +SW + G+ ++ + + +NIP+L+
Sbjct: 119 SVTEITASSFVVSWVSA----SDTVSGFRVEYELSEEGDEPQYLDLPSTATSVNIPDLLP 174
Query: 445 GRQYEFRVYAQNEAGLSLPSSAS 467
GR+Y VY +E G ++
Sbjct: 175 GRKYIVNVYQISEDGEQSLILST 197
Score = 118 bits (296), Expect = 6e-30
Identities = 32/203 (15%), Positives = 72/203 (35%), Gaps = 20/203 (9%)
Query: 1885 GPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPH-WICISTTCHDTTF 1943
GP + + ++ + WN P+ ++ Y++ R + W + H ++
Sbjct: 2 GPVEVFITETPSQPNSHPIQWNAPQ---PSHISKYILRWRPKNSVGRWKEATIPGHLNSY 58
Query: 1944 IVQGLTEGQEYLFHVMAVNENGMGPPLEGI------------NPIKAKSPYDKPSPPGIP 1991
++GL G Y ++++ + G N + ++ P
Sbjct: 59 TIKGLKPGVVYEGQLISIQQYGHQEVTRFDFTTTSTSTPVTSNTVTGETTPFSPLVATSE 118
Query: 1992 VVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIE 2051
VT++ +SW + G+ ++ + + +NIP+L+
Sbjct: 119 SVTEITASSFVVSWVSA----SDTVSGFRVEYELSEEGDEPQYLDLPSTATSVNIPDLLP 174
Query: 2052 GRQYEFRVYAQNEAGLSLPSSAS 2074
GR+Y VY +E G ++
Sbjct: 175 GRKYIVNVYQISEDGEQSLILST 197
Score = 99.7 bits (248), Expect = 1e-23
Identities = 31/235 (13%), Positives = 69/235 (29%), Gaps = 56/235 (23%)
Query: 904 PPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTK---VSSYVTTPFV 960
+ +S + W P+ S I+ Y++ + NS K + ++ +
Sbjct: 4 VEVFITETPSQPNSHPIQWNAPQ---PSHISKYILRWRPKNSVGRWKEATIPGHLNS--Y 58
Query: 961 RVRNLAIGSTYEFRVMAENQYGLSKPA------------LTIDPIKAKHPFDVPGAPGAP 1008
++ L G YE ++++ QYG + +T + + + P +
Sbjct: 59 TIKGLKPGVVYEGQLISIQQYGHQEVTRFDFTTTSTSTPVTSNTVTGETTPFSPLVATSE 118
Query: 1009 KGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVS 1068
+ T S + W + + VE L + + TS+
Sbjct: 119 SVTEITASSFVVSWVSA----SDTVSGFRVEYELSEEGDEPQYLDLPSTATSVN------ 168
Query: 1069 EGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPWSSSS 1123
+ L+ +Y V ++ G+ S+
Sbjct: 169 --------------------------IPDLLPGRKYIVNVYQISEDGEQSLILST 197
Score = 78.2 bits (192), Expect = 4e-16
Identities = 26/174 (14%), Positives = 61/174 (35%), Gaps = 21/174 (12%)
Query: 1232 SPPQGPLDVSDITPESCSLSWKPPLDDGGSPITNYVVEKYE-SATGFWSKLSSFVRSPAY 1290
P + + + P S + W P S I+ Y++ ++ G W + + +Y
Sbjct: 2 GPVEVFITETPSQPNSHPIQWNAPQ---PSHISKYILRWRPKNSVGRWKEATIPGHLNSY 58
Query: 1291 DVFGLETNRQYRFRVRAENQYGVSEPLELDNS------------ITAKFPFTVPDPPGQP 1338
+ GL+ Y ++ + QYG E D + +T + P
Sbjct: 59 TIKGLKPGVVYEGQLISIQQYGHQEVTRFDFTTTSTSTPVTSNTVTGETTPFSPLVATSE 118
Query: 1339 QIVDWDTNNATLMWDRPRTDGGSKIQGYKMLLKTPTGELPTTIWSKIRPTSSTV 1392
+ + ++ + W + G++ + + E + + T+++V
Sbjct: 119 SVTEITASSFVVSWVSA----SDTVSGFR-VEYELSEEGDEPQYLDLPSTATSV 167
Score = 67.4 bits (164), Expect = 2e-12
Identities = 22/96 (22%), Positives = 36/96 (37%), Gaps = 9/96 (9%)
Query: 672 PPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSWIRV----GNTRFTTM 727
F T +S + W AP S+I+ YI+ R + G+ +
Sbjct: 4 VEVFITETPSQPNSHPIQWNAP---QPSHISKYILRWRPKNSVGRWKEATIPGHL--NSY 58
Query: 728 AITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTK 763
I GL PG YE ++ + YG + + T+
Sbjct: 59 TIKGLKPGVVYEGQLISIQQYGHQEVTRFDFTTTST 94
Score = 66.2 bits (161), Expect = 6e-12
Identities = 17/96 (17%), Positives = 33/96 (34%), Gaps = 6/96 (6%)
Query: 668 DRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSWIRVGN--TRFT 725
P +V +I S + W + ++ + VE + + + T
Sbjct: 110 FSPLVATSESVTEITASSFVVSWVSA----SDTVSGFRVEYELSEEGDEPQYLDLPSTAT 165
Query: 726 TMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLIT 761
++ I L PG +Y VY + G ++ T
Sbjct: 166 SVNIPDLLPGRKYIVNVYQISEDGEQSLILSTSQTT 201
Score = 62.8 bits (152), Expect = 7e-11
Identities = 24/134 (17%), Positives = 40/134 (29%), Gaps = 28/134 (20%)
Query: 1207 SYTIQL--VNTVGSDSASCKVYVVDKPSPPQGP-----------------LDVSDITPES 1247
Y QL + G + + S P V++IT S
Sbjct: 68 VYEGQLISIQQYGHQEVTRFDFTTTSTSTPVTSNTVTGETTPFSPLVATSESVTEITASS 127
Query: 1248 CSLSWKPPLDDGGSPITNYVVEKYESATGFWSK---LSSFVRSPAYDVFGLETNRQYRFR 1304
+SW ++ + VE S G + L S S ++ L R+Y
Sbjct: 128 FVVSWVSA----SDTVSGFRVEYELSEEGDEPQYLDLPSTATS--VNIPDLLPGRKYIVN 181
Query: 1305 VRAENQYGVSEPLE 1318
V ++ G +
Sbjct: 182 VYQISEDGEQSLIL 195
Score = 60.1 bits (145), Expect = 7e-10
Identities = 20/107 (18%), Positives = 37/107 (34%), Gaps = 5/107 (4%)
Query: 261 SSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDIS 320
S+ S T T T V+EIT + + W V+ + VE
Sbjct: 95 STPVTSNTVTGETTPFSPLVATSESVTEITASSFVVSWVSA----SDTVSGFRVEYELSE 150
Query: 321 MPHWI-CISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGI 366
+ T+ + L G++Y+ +V ++E+G +
Sbjct: 151 EGDEPQYLDLPSTATSVNIPDLLPGRKYIVNVYQISEDGEQSLILST 197
Score = 60.1 bits (145), Expect = 7e-10
Identities = 20/107 (18%), Positives = 37/107 (34%), Gaps = 5/107 (4%)
Query: 1868 SSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDIS 1927
S+ S T T T V+EIT + + W V+ + VE
Sbjct: 95 STPVTSNTVTGETTPFSPLVATSESVTEITASSFVVSWVSA----SDTVSGFRVEYELSE 150
Query: 1928 MPHWI-CISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGI 1973
+ T+ + L G++Y+ +V ++E+G +
Sbjct: 151 EGDEPQYLDLPSTATSVNIPDLLPGRKYIVNVYQISEDGEQSLILST 197
Score = 59.7 bits (144), Expect = 1e-09
Identities = 16/94 (17%), Positives = 30/94 (31%), Gaps = 9/94 (9%)
Query: 900 DRPHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTK---VSSYVT 956
P + E S + W D ++ + VE + + + S T
Sbjct: 110 FSPLVATSESVTEITASSFVVSWVSASDT----VSGFRVEYELSEEGDEPQYLDLPSTAT 165
Query: 957 TPFVRVRNLAIGSTYEFRVMAENQYGLSKPALTI 990
+ V + +L G Y V ++ G L+
Sbjct: 166 S--VNIPDLLPGRKYIVNVYQISEDGEQSLILST 197
Score = 57.0 bits (137), Expect = 7e-09
Identities = 13/93 (13%), Positives = 25/93 (26%), Gaps = 3/93 (3%)
Query: 378 PSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQI 437
T + + W+ P S I Y + S + +
Sbjct: 2 GPVEVFITETPSQPNSHPIQWNAPQ---PSHISKYILRWRPKNSVGRWKEATIPGHLNSY 58
Query: 438 NIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSV 470
I L G YE ++ + + G + +
Sbjct: 59 TIKGLKPGVVYEGQLISIQQYGHQEVTRFDFTT 91
Score = 57.0 bits (137), Expect = 7e-09
Identities = 13/93 (13%), Positives = 25/93 (26%), Gaps = 3/93 (3%)
Query: 1985 PSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQI 2044
T + + W+ P S I Y + S + +
Sbjct: 2 GPVEVFITETPSQPNSHPIQWNAPQ---PSHISKYILRWRPKNSVGRWKEATIPGHLNSY 58
Query: 2045 NIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSV 2077
I L G YE ++ + + G + +
Sbjct: 59 TIKGLKPGVVYEGQLISIQQYGHQEVTRFDFTT 91
Score = 51.2 bits (122), Expect = 6e-07
Identities = 19/132 (14%), Positives = 35/132 (26%), Gaps = 35/132 (26%)
Query: 1011 VDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEG 1070
S +S + W+ P+ S I +YI+ R + K A IP Y +
Sbjct: 11 TPSQPNSHPIQWNAPQ---PSHISKYILRWRPKNSVGRWKE--ATIPGHLNSYTI----- 60
Query: 1071 KSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPWSSSSDIIMCCA 1130
L YE ++ ++ G + +
Sbjct: 61 -------------------------KGLKPGVVYEGQLISIQQYGHQEVTRFDFTTTSTS 95
Query: 1131 PPCAPKITSDLS 1142
P + +
Sbjct: 96 TPVTSNTVTGET 107
Score = 47.3 bits (112), Expect = 1e-05
Identities = 8/57 (14%), Positives = 21/57 (36%)
Query: 22 YIIERREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPSICTT 78
+ +E + D S ++ +L+ G Y + ++ G+ + T+
Sbjct: 142 FRVEYELSEEGDEPQYLDLPSTATSVNIPDLLPGRKYIVNVYQISEDGEQSLILSTS 198
Score = 45.0 bits (106), Expect = 8e-05
Identities = 12/53 (22%), Positives = 21/53 (39%)
Query: 22 YIIERREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPS 74
YI+ R K S+++ L G YE ++I++ G E +
Sbjct: 33 YILRWRPKNSVGRWKEATIPGHLNSYTIKGLKPGVVYEGQLISIQQYGHQEVT 85
Score = 42.7 bits (100), Expect = 4e-04
Identities = 20/123 (16%), Positives = 38/123 (30%), Gaps = 48/123 (39%)
Query: 1559 VDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEG 1618
S +S + W+ P+ S I +YI+ R
Sbjct: 11 TPSQPNSHPIQWNAPQ---PSHISKYILRWR----------------------------- 38
Query: 1619 KSIGSERGSTAQFLEREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKS 1678
+ S ++ E + G S+++ L G YE ++I++ G
Sbjct: 39 -----PKNSVGRWKEATIPGH-----------LNSYTIKGLKPGVVYEGQLISIQQYGHQ 82
Query: 1679 EPS 1681
E +
Sbjct: 83 EVT 85
Score = 42.7 bits (100), Expect = 5e-04
Identities = 15/164 (9%), Positives = 38/164 (23%), Gaps = 49/164 (29%)
Query: 1522 PRCHLPSSTSKERPKFPTHPNHQPWLKWARASLTSKGVDSTEDSISLVWSKPRHDGGSPI 1581
++TS P + + + + T S + W +
Sbjct: 84 VTRFDFTTTSTSTPVTSNTVTGETTPFSPLVATSESVTEITASSFVVSWVSA----SDTV 139
Query: 1582 QRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEGKSIGSERGSTAQFLEREVGGAIW 1641
+ VE L + + ++
Sbjct: 140 SGFRVEYELSEEGDEPQ----------------------------------YLDLPST-- 163
Query: 1642 LKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPSICTT 1685
S ++ +L+ G Y + ++ G+ + T+
Sbjct: 164 ---------ATSVNIPDLLPGRKYIVNVYQISEDGEQSLILSTS 198
>3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain,
fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB:
1x5k_A
Length = 211
Score = 117 bits (296), Expect = 7e-30
Identities = 39/237 (16%), Positives = 67/237 (28%), Gaps = 40/237 (16%)
Query: 902 PHPPENLHADEFAGDSLTLYWTPP---RDNGGSEITNYVVEKKDYNSTVWTKVSSYVTTP 958
PP + A + D++ + W + ++ Y V K ++ TT
Sbjct: 5 MMPPVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTKYKNANATTL 64
Query: 959 FVRVRNLAIGSTYEFRVMAENQYGLSKPALTIDPIKAKHPFDVPGAPGAP---KGVDSTE 1015
V L + YEF VM S + VP +P +
Sbjct: 65 SYLVTGLKPNTLYEFSVMVTKGRRSSTWS---MTAHGTTFELVPTSPPKDVTVVSKEGKP 121
Query: 1016 DSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEGKSIGS 1075
+I + W P G I YI+ + + + + L + +
Sbjct: 122 KTIIVNWQPPSEANG-KITGYIIYYSTDVNAEIHDWVIEPVVGNRLTHQI---------- 170
Query: 1076 ERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPWSSSSDIIMCCAPP 1132
L + Y F++ A N+ G GP S + A
Sbjct: 171 --------------------QELTLDTPYYFKIQARNSKGMGPMSEAVQFRTPKAHH 207
Score = 113 bits (284), Expect = 4e-28
Identities = 35/198 (17%), Positives = 64/198 (32%), Gaps = 13/198 (6%)
Query: 277 PGPPIGPLDVSEITKHTCTLHWNPP---KYDGGLKVTHYVVERRDISMPHWICISTTCHD 333
PP+G + S ++ T + W K+ +Y V + + +
Sbjct: 5 MMPPVG-VQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTKYKNANATT 63
Query: 334 TTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPV---VTQVG 390
+++V GL Y F VM + P+ P V +
Sbjct: 64 LSYLVTGLKPNTLYEFSVMVTKGRRSSTWSM---TAHGTTFELVPTSPPKDVTVVSKEGK 120
Query: 391 GDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQ--INIPNLIEGRQY 448
+ ++W P + G +I GY I + + ++ I L Y
Sbjct: 121 PKTIIVNWQPPSEANG-KITGYIIYYSTDVNAEIHDWVIEPVVGNRLTHQIQELTLDTPY 179
Query: 449 EFRVYAQNEAGLSLPSSA 466
F++ A+N G+ S A
Sbjct: 180 YFKIQARNSKGMGPMSEA 197
Score = 113 bits (284), Expect = 4e-28
Identities = 35/198 (17%), Positives = 64/198 (32%), Gaps = 13/198 (6%)
Query: 1884 PGPPIGPLDVSEITKHTCTLHWNPP---KYDGGLKVTHYVVERRDISMPHWICISTTCHD 1940
PP+G + S ++ T + W K+ +Y V + + +
Sbjct: 5 MMPPVG-VQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTKYKNANATT 63
Query: 1941 TTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPV---VTQVG 1997
+++V GL Y F VM + P+ P V +
Sbjct: 64 LSYLVTGLKPNTLYEFSVMVTKGRRSSTWSM---TAHGTTFELVPTSPPKDVTVVSKEGK 120
Query: 1998 GDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQ--INIPNLIEGRQY 2055
+ ++W P + G +I GY I + + ++ I L Y
Sbjct: 121 PKTIIVNWQPPSEANG-KITGYIIYYSTDVNAEIHDWVIEPVVGNRLTHQIQELTLDTPY 179
Query: 2056 EFRVYAQNEAGLSLPSSA 2073
F++ A+N G+ S A
Sbjct: 180 YFKIQARNSKGMGPMSEA 197
Score = 82.2 bits (203), Expect = 2e-17
Identities = 28/167 (16%), Positives = 48/167 (28%), Gaps = 12/167 (7%)
Query: 1231 PSPPQGPLDVSDITPESCSLSWKPPL---DDGGSPITNYVVEKYESATGFWSKLSSFVRS 1287
PP G + S ++ ++ ++W + Y V + ++ +
Sbjct: 5 MMPPVG-VQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTKYKNANATT 63
Query: 1288 PAYDVFGLETNRQYRFRVRAENQYGVSEPLELDNSITAKFPFTVPDPPGQPQIVDWDTNN 1347
+Y V GL+ N Y F V S + VP P + V
Sbjct: 64 LSYLVTGLKPNTLYEFSVMVTKGRRSSTWSM---TAHGTTFELVPTSPPKDVTVVSKEGK 120
Query: 1348 AT---LMWDRPRTDGGSKIQGYKMLLKTPTGELPTTIWSKIRPTSST 1391
+ W P G KI GY + + W +
Sbjct: 121 PKTIIVNWQPPSEANG-KITGYI-IYYSTDVNAEIHDWVIEPVVGNR 165
Score = 65.6 bits (160), Expect = 1e-11
Identities = 22/103 (21%), Positives = 38/103 (36%), Gaps = 5/103 (4%)
Query: 667 SDRPD-PPQFPTVEDIGHDSLALVWRAP---IWDGGSNITNYIVEKREHPMSSW-IRVGN 721
+D P PP + HD++ + W ++ Y V + + ++ + N
Sbjct: 1 ADLPMMPPVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTKYKNAN 60
Query: 722 TRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKD 764
+ +TGL P YEF V S S T+ T +
Sbjct: 61 ATTLSYLVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTTFEL 103
Score = 63.3 bits (154), Expect = 6e-11
Identities = 38/254 (14%), Positives = 68/254 (26%), Gaps = 65/254 (25%)
Query: 1000 DVP-GAPGAPKGVDSTEDSISLVWSKP---RHDGGSPIQRYIVEKRLISDDKWIKASMAH 1055
D+P P + + D+I + W+ +H + + Y V + +
Sbjct: 2 DLPMMPPVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANT---KYKN 58
Query: 1056 IPDTSLKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAG 1115
T+L Y+ VT L N YEF V
Sbjct: 59 ANATTLSYL------------------------------VTGLKPNTLYEFSVMVTKGRR 88
Query: 1116 QGPWSSSSDIIMCC----APPCAPKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTP--- 1168
W S P P +D+TV++ E T+ + +P
Sbjct: 89 SSTW---SMTAHGTTFELVPTSPP--------KDVTVVSKEGKPKTIIVNWQPPSEANGK 137
Query: 1169 -----IWTVNGDEVSPDGRIKFETSENQTIYRNKSAKRATDSGSYTIQL--VNTVGSDSA 1221
I+ + N+ ++ + T Y ++ N+ G
Sbjct: 138 ITGYIIYYSTDVNAEIHDWVIEPVVGNRLTHQIQELTLDT---PYYFKIQARNSKGMGPM 194
Query: 1222 SCKVYVVDKPSPPQ 1235
S V +
Sbjct: 195 SEAVQFRTPKAHHH 208
Score = 59.4 bits (144), Expect = 1e-09
Identities = 27/109 (24%), Positives = 43/109 (39%), Gaps = 6/109 (5%)
Query: 275 GLPGPPIGPLDVS--EITKHTCTLHWNPPKYDGGLKVTHYVVERR---DISMPHWICIST 329
+P P + V E T ++W PP G K+T Y++ + + W+
Sbjct: 103 LVPTSPPKDVTVVSKEGKPKTIIVNWQPPSEANG-KITGYIIYYSTDVNAEIHDWVIEPV 161
Query: 330 TCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKP 378
+ T +Q LT Y F + A N GMGP E + K+ +
Sbjct: 162 VGNRLTHQIQELTLDTPYYFKIQARNSKGMGPMSEAVQFRTPKAHHHHH 210
Score = 59.4 bits (144), Expect = 1e-09
Identities = 27/109 (24%), Positives = 43/109 (39%), Gaps = 6/109 (5%)
Query: 1882 GLPGPPIGPLDVS--EITKHTCTLHWNPPKYDGGLKVTHYVVERR---DISMPHWICIST 1936
+P P + V E T ++W PP G K+T Y++ + + W+
Sbjct: 103 LVPTSPPKDVTVVSKEGKPKTIIVNWQPPSEANG-KITGYIIYYSTDVNAEIHDWVIEPV 161
Query: 1937 TCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKP 1985
+ T +Q LT Y F + A N GMGP E + K+ +
Sbjct: 162 VGNRLTHQIQELTLDTPYYFKIQARNSKGMGPMSEAVQFRTPKAHHHHH 210
Score = 59.4 bits (144), Expect = 1e-09
Identities = 30/206 (14%), Positives = 57/206 (27%), Gaps = 33/206 (16%)
Query: 1130 APPCAPKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGD---------EVSPD 1180
P P + ++ TI + + P D P
Sbjct: 3 LPMMPP---VGVQASILS-----HDTIRI--TWADNSLPKHQKITDSRYYTVRWKTNIPA 52
Query: 1181 GRIKFETSENQTIYRNKSAKRATDSGSYTIQL--VNTVGSDSASCKVYVV---DKPSPPQ 1235
+ Y K T Y + S + S + P+ P
Sbjct: 53 NTKYKNANATTLSYLVTGLKPNT---LYEFSVMVTKGRRSSTWSMTAHGTTFELVPTSPP 109
Query: 1236 GPLDVS--DITPESCSLSWKPPLDDGGSPITNYVVEKYESATGFWSKLSSFVRSPA---Y 1290
+ V + P++ ++W+PP + G IT Y++ +
Sbjct: 110 KDVTVVSKEGKPKTIIVNWQPPSEANG-KITGYIIYYSTDVNAEIHDWVIEPVVGNRLTH 168
Query: 1291 DVFGLETNRQYRFRVRAENQYGVSEP 1316
+ L + Y F+++A N G+
Sbjct: 169 QIQELTLDTPYYFKIQARNSKGMGPM 194
Score = 58.7 bits (142), Expect = 2e-09
Identities = 30/180 (16%), Positives = 50/180 (27%), Gaps = 28/180 (15%)
Query: 599 PFTGYPKPKITWYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAPY-----RVVAEN 653
Y + W + + + + + ++T P V+
Sbjct: 38 DSRYY---TVRWKTNIP--ANTKYKNANATTLSYLVT-------GLKPNTLYEFSVMVTK 85
Query: 654 DLG--MDSAIVKIQ-ISDRP-DPPQFPTVE--DIGHDSLALVWRAPIWDGGSNITNYIVE 707
S P PP+ TV + ++ + W+ P G IT YI+
Sbjct: 86 GRRSSTWSMTAHGTTFELVPTSPPKDVTVVSKEGKPKTIIVNWQPPSEANG-KITGYIIY 144
Query: 708 KREHPMSSW----IRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTK 763
+ I T I L+ Y F++ A N G S T K
Sbjct: 145 YSTDVNAEIHDWVIEPVVGNRLTHQIQELTLDTPYYFKIQARNSKGMGPMSEAVQFRTPK 204
Score = 45.6 bits (108), Expect = 6e-05
Identities = 20/140 (14%), Positives = 33/140 (23%), Gaps = 47/140 (33%)
Query: 1550 ARASLTSKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSL 1609
+T + +I + W P G I YI+ + + + + L
Sbjct: 108 PPKDVTVVSKEGKPKTIIVNWQPPSEANG-KITGYIIYYSTDVNAEIHDWVIEPVVGNRL 166
Query: 1610 KYVLWVSEGKSIGSERGSTAQFLEREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRI 1669
+ + L Y F+I
Sbjct: 167 -------------------------------------------THQIQELTLDTPYYFKI 183
Query: 1670 IAVNAIG---KSEPSICTTP 1686
A N+ G SE TP
Sbjct: 184 QARNSKGMGPMSEAVQFRTP 203
Score = 43.3 bits (102), Expect = 3e-04
Identities = 14/61 (22%), Positives = 20/61 (32%), Gaps = 4/61 (6%)
Query: 22 YIIERREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPS---ICTT 78
Y + + A K + N S+ V L YEF ++ S S TT
Sbjct: 42 YTVRWKTNIPANT-KYKNANATTLSYLVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTT 100
Query: 79 P 79
Sbjct: 101 F 101
Score = 39.0 bits (91), Expect = 0.008
Identities = 18/136 (13%), Positives = 31/136 (22%), Gaps = 52/136 (38%)
Query: 1557 KGVDSTEDSISLVWSKP---RHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVL 1613
+ + D+I + W+ +H + + Y V +
Sbjct: 12 QASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANT----------------- 54
Query: 1614 WVSEGKSIGSERGSTAQFLEREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVN 1673
K + N S+ V L YEF ++
Sbjct: 55 -----------------------------KYKNANATTLSYLVTGLKPNTLYEFSVMVTK 85
Query: 1674 AIGKSEPS---ICTTP 1686
S S TT
Sbjct: 86 GRRSSTWSMTAHGTTF 101
Score = 37.1 bits (86), Expect = 0.035
Identities = 16/63 (25%), Positives = 21/63 (33%), Gaps = 5/63 (7%)
Query: 22 YIIERREVGGAIWLKCNDYNVL--ECSFSVLNLVEGNDYEFRIIAVNAIG---KSEPSIC 76
YII A V+ + + L Y F+I A N+ G SE
Sbjct: 141 YIIYYSTDVNAEIHDWVIEPVVGNRLTHQIQELTLDTPYYFKIQARNSKGMGPMSEAVQF 200
Query: 77 TTP 79
TP
Sbjct: 201 RTP 203
>1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular
matrix, adhesion, fusion protein, structural protein;
2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1
Length = 186
Score = 117 bits (294), Expect = 8e-30
Identities = 38/197 (19%), Positives = 63/197 (31%), Gaps = 18/197 (9%)
Query: 271 INITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTT 330
IN P L+VS+ T+ T +L W P Y + S +
Sbjct: 1 INAGTDLDNPKD-LEVSDPTETTLSLRWRRPVAK----FDRYRLTYVSPSGKKNE-MEIP 54
Query: 331 CHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVG 390
T+FI++GL G EY ++A P P + +
Sbjct: 55 VDSTSFILRGLDAGTEYTISLVAEKGRHKSKPTTI-------KGSTVVGSPKGISFSDIT 107
Query: 391 GDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEF 450
+ +SW P SR+ Y + + V V + ++ + L+ G Y
Sbjct: 108 ENSATVSWTPPR----SRVDSYRVSYVPITGGTPNVVTVDG-SKTRTKLVKLVPGVDYNV 162
Query: 451 RVYAQNEAGLSLPSSAS 467
+ + S P S
Sbjct: 163 NIISVKGFEESEPISGI 179
Score = 117 bits (294), Expect = 8e-30
Identities = 38/197 (19%), Positives = 63/197 (31%), Gaps = 18/197 (9%)
Query: 1878 INITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTT 1937
IN P L+VS+ T+ T +L W P Y + S +
Sbjct: 1 INAGTDLDNPKD-LEVSDPTETTLSLRWRRPVAK----FDRYRLTYVSPSGKKNE-MEIP 54
Query: 1938 CHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVG 1997
T+FI++GL G EY ++A P P + +
Sbjct: 55 VDSTSFILRGLDAGTEYTISLVAEKGRHKSKPTTI-------KGSTVVGSPKGISFSDIT 107
Query: 1998 GDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEF 2057
+ +SW P SR+ Y + + V V + ++ + L+ G Y
Sbjct: 108 ENSATVSWTPPR----SRVDSYRVSYVPITGGTPNVVTVDG-SKTRTKLVKLVPGVDYNV 162
Query: 2058 RVYAQNEAGLSLPSSAS 2074
+ + S P S
Sbjct: 163 NIISVKGFEESEPISGI 179
Score = 101 bits (254), Expect = 2e-24
Identities = 40/163 (24%), Positives = 68/163 (41%), Gaps = 17/163 (10%)
Query: 1230 KPSPPQGPLDVSDITPESCSLSWKPPLDDGGSPITNYVVEKYESATGFWSKLSSFVRSPA 1289
P+ L+VSD T + SL W+ P+ + Y + Y S +G +++ V S +
Sbjct: 6 DLDNPKD-LEVSDPTETTLSLRWRRPV----AKFDRYRLT-YVSPSGKKNEMEIPVDSTS 59
Query: 1290 YDVFGLETNRQYRFRVRAENQYGVSEPLELDNSITAKFPFTVPDPPGQPQIVDWDTNNAT 1349
+ + GL+ +Y + AE S+P + S TV P D N+AT
Sbjct: 60 FILRGLDAGTEYTISLVAEKGRHKSKPTTIKGS-------TVVGSPKGISFSDITENSAT 112
Query: 1350 LMWDRPRTDGGSKIQGYKMLLKTPTGELPTTIWSKIRPTSSTV 1392
+ W PR S++ Y++ TG P + T + +
Sbjct: 113 VSWTPPR----SRVDSYRVSYVPITGGTPNVVTVDGSKTRTKL 151
Score = 99.8 bits (249), Expect = 8e-24
Identities = 36/222 (16%), Positives = 69/222 (31%), Gaps = 49/222 (22%)
Query: 902 PHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTKVSSYVTTPFVR 961
P++L + +L+L W P ++ Y + + ++ V +
Sbjct: 7 LDNPKDLEVSDPTETTLSLRWRRPV----AKFDRYRLTYVSPSGK-KNEMEIPVDSTSFI 61
Query: 962 VRNLAIGSTYEFRVMAENQYGLSKPALTIDPIKAKHPFDVPGAPGAPKGVDSTEDSISLV 1021
+R L G+ Y ++AE SKP V G+P D TE+S ++
Sbjct: 62 LRGLDAGTEYTISLVAEKGRHKSKPTTI-------KGSTVVGSPKGISFSDITENSATVS 114
Query: 1022 WSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEGKSIGSERGSTA 1081
W+ PR S + Y V I+ ++ + + + L
Sbjct: 115 WTPPR----SRVDSYRVSYVPITGGTP---NVVTVDGSKTRTKL---------------- 151
Query: 1082 QFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPWSSSS 1123
L+ +Y + +V + S
Sbjct: 152 --------------VKLVPGVDYNVNIISVKGFEESEPISGI 179
Score = 77.9 bits (192), Expect = 3e-16
Identities = 29/171 (16%), Positives = 51/171 (29%), Gaps = 26/171 (15%)
Query: 599 PFTGYPKPKITWYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAPY-----RVVAEN 653
F Y ++T+ + + IL +VAE
Sbjct: 33 KFDRY---RLTYVSPSGKKNE---MEIPVDSTSFILR-------GLDAGTEYTISLVAEK 79
Query: 654 DLGMDSAIVKIQISDRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPM 713
S I+ S P+ + DI +S + W P S + +Y V
Sbjct: 80 GRH-KSKPTTIKGSTVVGSPKGISFSDITENSATVSWTPPR----SRVDSYRVSYVPITG 134
Query: 714 SSWIRV-GNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTK 763
+ V + T + L PG Y + + + S+P + + T
Sbjct: 135 GTPNVVTVDGSKTRTKLVKLVPGVDYNVNIISVKGFEESEPISGI--LKTA 183
Score = 74.0 bits (182), Expect = 7e-15
Identities = 21/94 (22%), Positives = 33/94 (35%), Gaps = 4/94 (4%)
Query: 664 IQISDRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSWIRVGNTR 723
I D P+ V D +L+L WR P+ + Y +
Sbjct: 1 INAGTDLDNPKDLEVSDPTETTLSLRWRRPV----AKFDRYRLTYVSPSGKKNEMEIPVD 56
Query: 724 FTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTS 757
T+ + GL G +Y + AE +S P+T
Sbjct: 57 STSFILRGLDAGTEYTISLVAEKGRHKSKPTTIK 90
Score = 65.5 bits (160), Expect = 7e-12
Identities = 27/115 (23%), Positives = 50/115 (43%), Gaps = 6/115 (5%)
Query: 253 DYTVNL-SNSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTH 311
+YT++L + S TI + + G P + S+IT+++ T+ W PP+ V
Sbjct: 70 EYTISLVAEKGRHKSKPTTIKGSTVVGSP-KGISFSDITENSATVSWTPPRSR----VDS 124
Query: 312 YVVERRDISMPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGI 366
Y V I+ ++ T + L G +Y ++++V P+ GI
Sbjct: 125 YRVSYVPITGGTPNVVTVDGSKTRTKLVKLVPGVDYNVNIISVKGFEESEPISGI 179
Score = 65.5 bits (160), Expect = 7e-12
Identities = 27/115 (23%), Positives = 50/115 (43%), Gaps = 6/115 (5%)
Query: 1860 DYTVNL-SNSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTH 1918
+YT++L + S TI + + G P + S+IT+++ T+ W PP+ V
Sbjct: 70 EYTISLVAEKGRHKSKPTTIKGSTVVGSP-KGISFSDITENSATVSWTPPRSR----VDS 124
Query: 1919 YVVERRDISMPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGI 1973
Y V I+ ++ T + L G +Y ++++V P+ GI
Sbjct: 125 YRVSYVPITGGTPNVVTVDGSKTRTKLVKLVPGVDYNVNIISVKGFEESEPISGI 179
Score = 65.2 bits (159), Expect = 7e-12
Identities = 30/128 (23%), Positives = 45/128 (35%), Gaps = 13/128 (10%)
Query: 1207 SYTIQLV-NTVGSDSASCKVYVVDKPSPPQGPLDVSDITPESCSLSWKPPLDDGGSPITN 1265
YTI LV S + P+G + SDIT S ++SW PP S + +
Sbjct: 70 EYTISLVAEKGRHKSKPTTIKGSTVVGSPKG-ISFSDITENSATVSWTPPR----SRVDS 124
Query: 1266 YVVEKYESATGFWSKLSSFVRSPAYDVFGLETNRQYRFRVRAENQYGVSEPLELDNSITA 1325
Y V G + ++ + L Y + + + SEP+ S
Sbjct: 125 YRVSYVPITGGTPNVVTVDGSKTRTKLVKLVPGVDYNVNIISVKGFEESEPI----SGIL 180
Query: 1326 KFPFTVPD 1333
K T D
Sbjct: 181 K---TALD 185
Score = 46.3 bits (110), Expect = 2e-05
Identities = 24/147 (16%), Positives = 39/147 (26%), Gaps = 45/147 (30%)
Query: 1001 VPGAPGAPKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTS 1060
P + D TE ++SL W +P + RY + S K IP S
Sbjct: 6 DLDNPKDLEVSDPTETTLSLRWRRPV----AKFDRYRLTYVSPSGKKNEM----EIPVDS 57
Query: 1061 LKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPWS 1120
++L L EY + A + +
Sbjct: 58 TSFIL------------------------------RGLDAGTEYTISLVAEKGRHKSKPT 87
Query: 1121 SSSDIIMCCAPPCAPKITSDLSIRDMT 1147
+ +P +S D+T
Sbjct: 88 TIKG----STVVGSP---KGISFSDIT 107
Score = 38.6 bits (90), Expect = 0.010
Identities = 25/131 (19%), Positives = 38/131 (29%), Gaps = 53/131 (40%)
Query: 1559 VDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEG 1618
D TE+S ++ W+ PR S + Y V I+
Sbjct: 104 SDITENSATVSWTPPR----SRVDSYRVSYVPITGGTP---------------------- 137
Query: 1619 KSIGSERGSTAQFLEREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKS 1678
V G+ + ++ LV G DY II+V +S
Sbjct: 138 -------------NVVTVDGS-----------KTRTKLVKLVPGVDYNVNIISVKGFEES 173
Query: 1679 EP---SICTTP 1686
EP + T
Sbjct: 174 EPISGILKTAL 184
Score = 38.2 bits (89), Expect = 0.011
Identities = 14/61 (22%), Positives = 23/61 (37%), Gaps = 4/61 (6%)
Query: 22 YIIERREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEP---SICTT 78
Y + + G + + ++ LV G DY II+V +SEP + T
Sbjct: 125 YRVSYVPITGG-TPNVVTVDGSKTRTKLVKLVPGVDYNVNIISVKGFEESEPISGILKTA 183
Query: 79 P 79
Sbjct: 184 L 184
Score = 37.4 bits (87), Expect = 0.022
Identities = 11/58 (18%), Positives = 19/58 (32%), Gaps = 2/58 (3%)
Query: 22 YIIERREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPSICTTP 79
Y + G + SF + L G +Y ++A KS+P+
Sbjct: 37 YRLTYVSPSGKKNEMEIPVDST--SFILRGLDAGTEYTISLVAEKGRHKSKPTTIKGS 92
Score = 37.0 bits (86), Expect = 0.029
Identities = 19/127 (14%), Positives = 34/127 (26%), Gaps = 51/127 (40%)
Query: 1560 DSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEGK 1619
D TE ++SL W +P + RY + + K + +
Sbjct: 17 DPTETTLSLRWRRPV----AKFDRYRLTYV---------------SPSGKKNEMEIPVDS 57
Query: 1620 SIGSERGSTAQFLEREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSE 1679
+ SF + L G +Y ++A KS+
Sbjct: 58 T--------------------------------SFILRGLDAGTEYTISLVAEKGRHKSK 85
Query: 1680 PSICTTP 1686
P+
Sbjct: 86 PTTIKGS 92
Score = 35.5 bits (82), Expect = 0.096
Identities = 16/70 (22%), Positives = 28/70 (40%), Gaps = 8/70 (11%)
Query: 1323 ITAKFPFTVPDPPGQPQIVDWDTNNATLMWDRPRTDGGSKIQGYKMLLKTPTGELPTTIW 1382
I A T D P ++ D +L W RP +K Y++ +P+G+ +
Sbjct: 1 INAG---TDLDNPKDLEVSDPTETTLSLRWRRPV----AKFDRYRLTYVSPSGK-KNEME 52
Query: 1383 SKIRPTSSTV 1392
+ TS +
Sbjct: 53 IPVDSTSFIL 62
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine
kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing
protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB:
3lm0_A*
Length = 327
Score = 121 bits (306), Expect = 8e-30
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 4/88 (4%)
Query: 814 KTSSVYDHYDIL-EEIGTGAFGVVHRCRERKTGNIFAAKFIPVSH--NLEKELIRKEIDI 870
+ + Y + +E+G G F VV +C + TG +AAKF+ + I EI +
Sbjct: 22 SMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAV 81
Query: 871 MNQL-HHPKLINLHDAFEDDDEMVLIFE 897
+ P++INLH+ +E+ E++LI E
Sbjct: 82 LELAKSCPRVINLHEVYENTSEIILILE 109
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein
complex, receptor tyrosine kinas binding, immunoglobulin
domain, kinase, membrane, nucleotid binding; HET: NAG;
2.10A {Homo sapiens}
Length = 241
Score = 119 bits (299), Expect = 8e-30
Identities = 49/234 (20%), Positives = 77/234 (32%), Gaps = 25/234 (10%)
Query: 86 VGGEKPDFIVPL----KDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYR-VE 140
V P + P K L VP + +C A G P P WL+NGRE R ++
Sbjct: 7 VDTGAPYWTRPERMDKKLLAVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHRIGGIK 66
Query: 141 TAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIG-----TPPRIDRMPNALYI 195
+ L V D G+YTC N G + + + P +P
Sbjct: 67 LRHQQWSLVMESVVPSDRGNYTCVVENKFGSIRQTYTLDVLERSPHRPILQAGLPANQTA 126
Query: 196 PEGDNTKVKIFYAGDQPMEVS----LTKNGRVVQSDDRFKFTVLDDYIIIF--------I 243
G + + D + + NG V D TVL +I +
Sbjct: 127 VLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKSWISESVEADVRLRL 186
Query: 244 KEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPIGPLDVSE---ITKHTC 294
+ + D G+Y +N G F +++ G ++ E + H
Sbjct: 187 ANVSERDGGEYLCRATNFIGVAEKAFWLSVHGPRAAEEELVEADEAGSVHHHHH 240
Score = 119 bits (299), Expect = 8e-30
Identities = 49/234 (20%), Positives = 77/234 (32%), Gaps = 25/234 (10%)
Query: 1693 VGGEKPDFIVPL----KDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYR-VE 1747
V P + P K L VP + +C A G P P WL+NGRE R ++
Sbjct: 7 VDTGAPYWTRPERMDKKLLAVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHRIGGIK 66
Query: 1748 TAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIG-----TPPRIDRMPNALYI 1802
+ L V D G+YTC N G + + + P +P
Sbjct: 67 LRHQQWSLVMESVVPSDRGNYTCVVENKFGSIRQTYTLDVLERSPHRPILQAGLPANQTA 126
Query: 1803 PEGDNTKVKIFYAGDQPMEVS----LTKNGRVVQSDDRFKFTVLDDYIIIF--------I 1850
G + + D + + NG V D TVL +I +
Sbjct: 127 VLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKSWISESVEADVRLRL 186
Query: 1851 KEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPIGPLDVSE---ITKHTC 1901
+ + D G+Y +N G F +++ G ++ E + H
Sbjct: 187 ANVSERDGGEYLCRATNFIGVAEKAFWLSVHGPRAAEEELVEADEAGSVHHHHH 240
Score = 116 bits (291), Expect = 8e-29
Identities = 47/225 (20%), Positives = 71/225 (31%), Gaps = 25/225 (11%)
Query: 478 AKAPEIIVPLRNANAIQ----NHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFA-E 532
AP P R + + +F+C G P P+ISWLK RE R
Sbjct: 9 TGAPYWTRPERMDKKLLAVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHRIGGIKLR 68
Query: 533 GDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPRFRD-----TAY 587
++L++ SV D Y C NK G L ++ P TA
Sbjct: 69 HQQWSLVMESVVPSDRGNYTCVVENKFGSIRQTYTLDVLERSPH-RPILQAGLPANQTAV 127
Query: 588 FDKGENVVVKIPFTGYPKPKITWYRDNEV------------IESGGHFHVETSERHAILT 635
G +V +P I W + EV + + E+ E L
Sbjct: 128 L--GSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKSWISESVEADVRLR 185
Query: 636 IRDASNVDTAPYRVVAENDLGMDSAIVKIQISDRPDPPQFPTVED 680
+ + S D Y A N +G+ + + + D
Sbjct: 186 LANVSERDGGEYLCRATNFIGVAEKAFWLSVHGPRAAEEELVEAD 230
Score = 79.6 bits (196), Expect = 3e-16
Identities = 25/139 (17%), Positives = 45/139 (32%), Gaps = 15/139 (10%)
Query: 454 AQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTIS 513
+N+ G + ++ + + + N A+ + +F C + +P I
Sbjct: 91 VENKFGSI---RQTYTLDVLERSPHRPILQAGLPANQTAVLGSDVEFHCKVYSDAQPHIQ 147
Query: 514 WLK------------GSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGV 561
WLK G+ +T + L + +V D EY+CRA N GV
Sbjct: 148 WLKHVEVNGSKVGPDGTPYVTVLKSWISESVEADVRLRLANVSERDGGEYLCRATNFIGV 207
Query: 562 KSTKAELIIMTAPKFNVPP 580
L +
Sbjct: 208 AEKAFWLSVHGPRAAEEEL 226
Score = 79.6 bits (196), Expect = 3e-16
Identities = 25/139 (17%), Positives = 45/139 (32%), Gaps = 15/139 (10%)
Query: 2061 AQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTIS 2120
+N+ G + ++ + + + N A+ + +F C + +P I
Sbjct: 91 VENKFGSI---RQTYTLDVLERSPHRPILQAGLPANQTAVLGSDVEFHCKVYSDAQPHIQ 147
Query: 2121 WLK------------GSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGV 2168
WLK G+ +T + L + +V D EY+CRA N GV
Sbjct: 148 WLKHVEVNGSKVGPDGTPYVTVLKSWISESVEADVRLRLANVSERDGGEYLCRATNFIGV 207
Query: 2169 KSTKAELIIMTAPKFNVPP 2187
L +
Sbjct: 208 AEKAFWLSVHGPRAAEEEL 226
Score = 79.6 bits (196), Expect = 3e-16
Identities = 27/183 (14%), Positives = 51/183 (27%), Gaps = 29/183 (15%)
Query: 33 IWLKCNDYNVLECSFSVLNLVEGNDYEFRI-------------IAVNAIGKSEPSICTTP 79
WLK N + + + + N G T
Sbjct: 48 SWLK-NGREFRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTCVVENKFGSIR---QTYT 103
Query: 80 VKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGRE--------- 130
+ + E + LG + C+ P +WL++
Sbjct: 104 LDVLERSPHRPILQAGLPANQTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPDG 163
Query: 131 ---ISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRID 187
++ + E+ RL V++ D G+Y C A N +G A + + + P +
Sbjct: 164 TPYVTVLKSWISESVEADVRLRLANVSERDGGEYLCRATNFIGVAEKAFWLSVHGPRAAE 223
Query: 188 RMP 190
Sbjct: 224 EEL 226
Score = 79.6 bits (196), Expect = 3e-16
Identities = 27/183 (14%), Positives = 51/183 (27%), Gaps = 29/183 (15%)
Query: 1640 IWLKCNDYNVLECSFSVLNLVEGNDYEFRI-------------IAVNAIGKSEPSICTTP 1686
WLK N + + + + N G T
Sbjct: 48 SWLK-NGREFRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTCVVENKFGSIR---QTYT 103
Query: 1687 VKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGRE--------- 1737
+ + E + LG + C+ P +WL++
Sbjct: 104 LDVLERSPHRPILQAGLPANQTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPDG 163
Query: 1738 ---ISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRID 1794
++ + E+ RL V++ D G+Y C A N +G A + + + P +
Sbjct: 164 TPYVTVLKSWISESVEADVRLRLANVSERDGGEYLCRATNFIGVAEKAFWLSVHGPRAAE 223
Query: 1795 RMP 1797
Sbjct: 224 EEL 226
Score = 76.9 bits (189), Expect = 3e-15
Identities = 28/110 (25%), Positives = 39/110 (35%), Gaps = 6/110 (5%)
Query: 2085 AKAPEIIVPLRNANAIQ----NHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFA-E 2139
AP P R + + +F+C G P P+ISWLK RE R
Sbjct: 9 TGAPYWTRPERMDKKLLAVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHRIGGIKLR 68
Query: 2140 GDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPRF 2189
++L++ SV D Y C NK G L ++ P
Sbjct: 69 HQQWSLVMESVVPSDRGNYTCVVENKFGSIRQTYTLDVLERSPH-RPILQ 117
Score = 62.3 bits (151), Expect = 3e-10
Identities = 25/107 (23%), Positives = 42/107 (39%), Gaps = 10/107 (9%)
Query: 1134 APKITSDLSI--RDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQ 1191
AP T + + + V A P +G P P+ W NG E + RI +Q
Sbjct: 11 APYWTRPERMDKKLLAVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHRIGGIKLRHQ 70
Query: 1192 ----TIYRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYVVDKPSPP 1234
+ +S +D G+YT + N GS + + V+++
Sbjct: 71 QWSLVM---ESVVP-SDRGNYTCVVENKFGSIRQTYTLDVLERSPHR 113
Score = 56.1 bits (135), Expect = 2e-08
Identities = 18/122 (14%), Positives = 36/122 (29%), Gaps = 13/122 (10%)
Query: 1130 APPCAPKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWT----VNGDEVSPDGRIKF 1185
+P + T + G + +P W VNG +V PDG
Sbjct: 110 SPHRPILQAGLP--ANQTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPDGTPYV 167
Query: 1186 ETSENQTIYRNKSAK-------RATDSGSYTIQLVNTVGSDSASCKVYVVDKPSPPQGPL 1238
++ ++ D G Y + N +G + + V + + +
Sbjct: 168 TVLKSWISESVEADVRLRLANVSERDGGEYLCRATNFIGVAEKAFWLSVHGPRAAEEELV 227
Query: 1239 DV 1240
+
Sbjct: 228 EA 229
Score = 50.7 bits (121), Expect = 2e-06
Identities = 19/108 (17%), Positives = 30/108 (27%), Gaps = 7/108 (6%)
Query: 1401 SSNSEPGKQSGPVIVEEQPNKPVMDLSGVRDITVKAGEDFSIHVPFMAFPQPAAFWFAND 1460
+ P + + + V A P P P+ W N
Sbjct: 1 ADPDTGVDTGAPYWTRPERMDK-------KLLAVPAANTVRFRCPAAGNPTPSISWLKNG 53
Query: 1461 SIIDDSDTRVHKQLTMNSASLVVKNSQRSDGGQYRLQLKNPAGFDTAT 1508
+L SLV+++ SD G Y ++N G T
Sbjct: 54 REFRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTCVVENKFGSIRQT 101
Score = 49.2 bits (117), Expect = 6e-06
Identities = 18/106 (16%), Positives = 32/106 (30%), Gaps = 11/106 (10%)
Query: 1414 IVEEQPNKPVMDLSGVRDITVKAGEDFSIHVPFMAFPQPAAFWF-----------ANDSI 1462
++E P++P++ + T G D H + QP W + +
Sbjct: 106 VLERSPHRPILQAGLPANQTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPDGTP 165
Query: 1463 IDDSDTRVHKQLTMNSASLVVKNSQRSDGGQYRLQLKNPAGFDTAT 1508
+ L + N DGG+Y + N G
Sbjct: 166 YVTVLKSWISESVEADVRLRLANVSERDGGEYLCRATNFIGVAEKA 211
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A
{Homo sapiens}
Length = 207
Score = 116 bits (293), Expect = 2e-29
Identities = 29/200 (14%), Positives = 62/200 (31%), Gaps = 21/200 (10%)
Query: 484 IVPLRNANAIQNHNAQFQ-CTITGCPKPTISWLKGSREITPSARHHIFAEGDT--YTLII 540
++ +F ++++ +EI ++ + + +T + +
Sbjct: 6 TKSELAVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFM 65
Query: 541 NSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPRFRDTAYFDK---------- 590
+ D Y + + + L+ K F+ + K
Sbjct: 66 EKLQDEDEGTYTFQLQDGKATNHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYLS 125
Query: 591 -----GENVVVKIPFTGYPKP-KITWYRDNEVIESGGHFHVETSERHAILTIRDASNVDT 644
NV++K K I WY+D I + L I + S D
Sbjct: 126 WEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDEKHDFKDGI--CTLLITEFSKKDA 183
Query: 645 APYRVVAENDLGMDSAIVKI 664
Y V+ ++D G D + +K+
Sbjct: 184 GIYEVILKDDRGKDKSRLKL 203
Score = 115 bits (288), Expect = 7e-29
Identities = 33/203 (16%), Positives = 69/203 (33%), Gaps = 24/203 (11%)
Query: 91 PDFIVPLKDLVVPLGKLLTLQCEAT-GTPVPKCRWLRNGREISSGARYRVET--AGGVFR 147
F + + + +A + K ++ N +EI G +Y++ G+
Sbjct: 3 DPFTKSELAVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIE 62
Query: 148 LHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDR------------------M 189
+ ++ D D G YT + + H++ + ++ +
Sbjct: 63 MFMEKLQDEDEGTYTFQLQDGKATNHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVE 122
Query: 190 PNALYIPEGDNTKVKIFYAGD-QPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRK 248
+ + N +K A + + K+ R + D++ F D + I E K
Sbjct: 123 YLSWEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDEKHDFK--DGICTLLITEFSK 180
Query: 249 EDAGDYTVNLSNSSGSVSGTFTI 271
+DAG Y V L + G +
Sbjct: 181 KDAGIYEVILKDDRGKDKSRLKL 203
Score = 115 bits (288), Expect = 7e-29
Identities = 33/203 (16%), Positives = 69/203 (33%), Gaps = 24/203 (11%)
Query: 1698 PDFIVPLKDLVVPLGKLLTLQCEAT-GTPVPKCRWLRNGREISSGARYRVET--AGGVFR 1754
F + + + +A + K ++ N +EI G +Y++ G+
Sbjct: 3 DPFTKSELAVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIE 62
Query: 1755 LHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDR------------------M 1796
+ ++ D D G YT + + H++ + ++ +
Sbjct: 63 MFMEKLQDEDEGTYTFQLQDGKATNHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVE 122
Query: 1797 PNALYIPEGDNTKVKIFYAGD-QPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRK 1855
+ + N +K A + + K+ R + D++ F D + I E K
Sbjct: 123 YLSWEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDEKHDFK--DGICTLLITEFSK 180
Query: 1856 EDAGDYTVNLSNSSGSVSGTFTI 1878
+DAG Y V L + G +
Sbjct: 181 KDAGIYEVILKDDRGKDKSRLKL 203
Score = 83.1 bits (205), Expect = 1e-17
Identities = 24/147 (16%), Positives = 49/147 (33%), Gaps = 15/147 (10%)
Query: 436 QINIPNLIEGRQYEFRVYAQNEAG-----------LSLPSSASNSVQIKDPMAAKAPEII 484
++ + L + + + Q+ + Q ++ + + P +
Sbjct: 62 EMFMEKLQDEDEGTYTFQLQDGKATNHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFV 121
Query: 485 VPLRNANAIQNHNAQFQCTITGCPKPT-ISWLKGSREITPSARHHIFAEGDTYTLIINSV 543
L + N +C + K T I W K REI+ +H + TL+I
Sbjct: 122 EYL-SWEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDEKHDF--KDGICTLLITEF 178
Query: 544 YGVDADEYVCRAVNKGGVKSTKAELII 570
DA Y + G ++ +L+
Sbjct: 179 SKKDAGIYEVILKDDRGKDKSRLKLVD 205
Score = 83.1 bits (205), Expect = 1e-17
Identities = 24/147 (16%), Positives = 49/147 (33%), Gaps = 15/147 (10%)
Query: 2043 QINIPNLIEGRQYEFRVYAQNEAG-----------LSLPSSASNSVQIKDPMAAKAPEII 2091
++ + L + + + Q+ + Q ++ + + P +
Sbjct: 62 EMFMEKLQDEDEGTYTFQLQDGKATNHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFV 121
Query: 2092 VPLRNANAIQNHNAQFQCTITGCPKPT-ISWLKGSREITPSARHHIFAEGDTYTLIINSV 2150
L + N +C + K T I W K REI+ +H + TL+I
Sbjct: 122 EYL-SWEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDEKHDF--KDGICTLLITEF 178
Query: 2151 YGVDADEYVCRAVNKGGVKSTKAELII 2177
DA Y + G ++ +L+
Sbjct: 179 SKKDAGIYEVILKDDRGKDKSRLKLVD 205
Score = 80.4 bits (198), Expect = 9e-17
Identities = 22/152 (14%), Positives = 50/152 (32%), Gaps = 15/152 (9%)
Query: 39 DYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPSICTT-----------PVKICEFVG 87
D N + L + ++ + + + ++ + E++
Sbjct: 55 DRNTGIIEMFMEKLQDEDEGTYTFQLQDGKATNHSTVVLVGDVFKKLQKEAEFQRQEWIR 114
Query: 88 GEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKC-RWLRNGREISSGARYRVETAGGVF 146
+ P F+ L V + L+C+ W ++ REIS ++ + G+
Sbjct: 115 KQGPHFVEYL-SWEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDEKHDFKD--GIC 171
Query: 147 RLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRV 178
L E + D G Y + G + ++
Sbjct: 172 TLLITEFSKKDAGIYEVILKDDRGKDKSRLKL 203
Score = 80.4 bits (198), Expect = 9e-17
Identities = 22/152 (14%), Positives = 50/152 (32%), Gaps = 15/152 (9%)
Query: 1646 DYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPSICTT-----------PVKICEFVG 1694
D N + L + ++ + + + ++ + E++
Sbjct: 55 DRNTGIIEMFMEKLQDEDEGTYTFQLQDGKATNHSTVVLVGDVFKKLQKEAEFQRQEWIR 114
Query: 1695 GEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKC-RWLRNGREISSGARYRVETAGGVF 1753
+ P F+ L V + L+C+ W ++ REIS ++ + G+
Sbjct: 115 KQGPHFVEYL-SWEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDEKHDFKD--GIC 171
Query: 1754 RLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRV 1785
L E + D G Y + G + ++
Sbjct: 172 TLLITEFSKKDAGIYEVILKDDRGKDKSRLKL 203
Score = 68.8 bits (168), Expect = 7e-13
Identities = 9/109 (8%), Positives = 31/109 (28%), Gaps = 3/109 (2%)
Query: 2091 IVPLRNANAIQNHNAQFQ-CTITGCPKPTISWLKGSREITPSARHHIFAEGDT--YTLII 2147
++ +F ++++ +EI ++ + + +T + +
Sbjct: 6 TKSELAVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFM 65
Query: 2148 NSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPRFRDTAYFE 2196
+ D Y + + + L+ K F+ +
Sbjct: 66 EKLQDEDEGTYTFQLQDGKATNHSTVVLVGDVFKKLQKEAEFQRQEWIR 114
Score = 59.2 bits (143), Expect = 2e-09
Identities = 26/179 (14%), Positives = 49/179 (27%), Gaps = 23/179 (12%)
Query: 1064 VLWVSEGKSIGSERGSTAQFLE---LLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPWS 1120
V ++ K I ++ MF+ L + E + + +
Sbjct: 35 VNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEK----LQDEDEGTYTFQLQDGKATNHST 90
Query: 1121 SSSDIIMCCAPPCAPKITSDLSIR----------DMTVLAGEEFTITVPFSGRPKPTPI- 1169
+ + IR V + + K T I
Sbjct: 91 VVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYLSWEVTGECNVLLKCKVANIKKETHIV 150
Query: 1170 WTVNGDEVSPDGRIKFETSENQ-TIYRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYV 1227
W + E+S D + F+ I + D+G Y + L + G D + K+
Sbjct: 151 WYKDEREISVDEKHDFKDGICTLLI---TEFSKK-DAGIYEVILKDDRGKDKSRLKLVD 205
Score = 56.1 bits (135), Expect = 2e-08
Identities = 10/109 (9%), Positives = 28/109 (25%), Gaps = 4/109 (3%)
Query: 574 PKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSERHAI 633
F +KG+ K+ + + + I G + + I
Sbjct: 3 DPFTKSEL--AVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGI 60
Query: 634 --LTIRDASNVDTAPYRVVAENDLGMDSAIVKIQISDRPDPPQFPTVED 680
+ + + D Y ++ + + V + + +
Sbjct: 61 IEMFMEKLQDEDEGTYTFQLQDGKATNHSTVVLVGDVFKKLQKEAEFQR 109
Score = 55.7 bits (134), Expect = 2e-08
Identities = 17/105 (16%), Positives = 32/105 (30%), Gaps = 3/105 (2%)
Query: 1144 RDMTVLAGEEFTITV-PFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQTIYRNKSAK-R 1201
+ +L + + + N E+ + K N I K +
Sbjct: 10 LAVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQ 69
Query: 1202 ATDSGSYTIQLVNTVGSDSASCKVYVVDKPSPPQGPLDVSDITPE 1246
D G+YT QL + ++ ++ V V D Q +
Sbjct: 70 DEDEGTYTFQLQDGKATNHSTV-VLVGDVFKKLQKEAEFQRQEWI 113
Score = 50.3 bits (120), Expect = 1e-06
Identities = 19/124 (15%), Positives = 35/124 (28%), Gaps = 9/124 (7%)
Query: 1388 TSSTVYCKDTTMNSSNSEPGKQSGPVIVEEQPNKPVMDLSGVRDITVKAGEDFSIHVPFM 1447
STV E Q I ++ P V + +
Sbjct: 87 NHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGP-----HFVEYLSWEVTGECNVLLKCKVA 141
Query: 1448 AFPQPAAF-WFANDSIIDDSDTRVHKQLTMNSASLVVKNSQRSDGGQYRLQLKNPAGFDT 1506
+ W+ ++ I + +L++ + D G Y + LK+ G D
Sbjct: 142 NIKKETHIVWYKDEREISVDEKH---DFKDGICTLLITEFSKKDAGIYEVILKDDRGKDK 198
Query: 1507 ATLH 1510
+ L
Sbjct: 199 SRLK 202
Score = 48.0 bits (114), Expect = 1e-05
Identities = 14/119 (11%), Positives = 34/119 (28%), Gaps = 5/119 (4%)
Query: 1430 RDITVKAGED--FSIHVPFMAFPQPAAFWFAND-SIIDDSDTRVHKQLTMNSASLVVKNS 1486
+ + F + + N+ I + ++H + ++
Sbjct: 10 LAVEILEKGQVRFWMQAEK-LSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKL 68
Query: 1487 QRSDGGQYRLQLKNPAGFDTATLHSRLRTLPD-SVNPRCHLPSSTSKERPKFPTHPNHQ 1544
Q D G Y QL++ + +T+ K+ P F + + +
Sbjct: 69 QDEDEGTYTFQLQDGKATNHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYLSWE 127
>2crz_A Fibronectin type-III domain containing protein 3A; structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Length = 110
Score = 112 bits (283), Expect = 3e-29
Identities = 31/104 (29%), Positives = 40/104 (38%), Gaps = 3/104 (2%)
Query: 1231 PSPPQGPLDVSDITPESCSLSWKPPLDDGGSPITNYVVEKYESATGFWSKLSSFVRSPAY 1290
P P P + L W PPL DGGSPI+ Y VE ++
Sbjct: 9 PGPCLPPRLQGRPKAKEIQLRWGPPLVDGGSPISCYSVEMSPIEKDEPREVYQ-GSEVEC 67
Query: 1291 DVFGLETNRQYRFRVRAENQYGVSEPLELDNSITAKFPFTVPDP 1334
V L + Y FR+RA N+ G E + TA P + P
Sbjct: 68 TVSSLLPGKTYSFRLRAANKMGFGPFSEKCDITTA--PGSGPSS 109
Score = 110 bits (278), Expect = 1e-28
Identities = 28/100 (28%), Positives = 38/100 (38%), Gaps = 1/100 (1%)
Query: 667 SDRPDPPQFPTVED-IGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSWIRVGNTRFT 725
S P P P ++ + L W P+ DGGS I+ Y VE V
Sbjct: 6 SGPPGPCLPPRLQGRPKAKEIQLRWGPPLVDGGSPISCYSVEMSPIEKDEPREVYQGSEV 65
Query: 726 TMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKDT 765
++ L PG Y FR+ A N G S D+ T +
Sbjct: 66 ECTVSSLLPGKTYSFRLRAANKMGFGPFSEKCDITTAPGS 105
Score = 105 bits (265), Expect = 7e-27
Identities = 31/107 (28%), Positives = 41/107 (38%), Gaps = 3/107 (2%)
Query: 274 TGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHD 333
+G PGP + P L W PP DGG ++ Y VE I + +
Sbjct: 6 SGPPGPCLPPRLQGRPKAKEIQLRWGPPLVDGGSPISCYSVEMSPIEKDEPREV-YQGSE 64
Query: 334 TTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSP 380
V L G+ Y F + A N+ G GP E + A P PS
Sbjct: 65 VECTVSSLLPGKTYSFRLRAANKMGFGPFSEKCDITTA--PGSGPSS 109
Score = 105 bits (265), Expect = 7e-27
Identities = 31/107 (28%), Positives = 41/107 (38%), Gaps = 3/107 (2%)
Query: 1881 TGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHD 1940
+G PGP + P L W PP DGG ++ Y VE I + +
Sbjct: 6 SGPPGPCLPPRLQGRPKAKEIQLRWGPPLVDGGSPISCYSVEMSPIEKDEPREV-YQGSE 64
Query: 1941 TTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSP 1987
V L G+ Y F + A N+ G GP E + A P PS
Sbjct: 65 VECTVSSLLPGKTYSFRLRAANKMGFGPFSEKCDITTA--PGSGPSS 109
Score = 98.6 bits (246), Expect = 3e-24
Identities = 35/139 (25%), Positives = 44/139 (31%), Gaps = 37/139 (26%)
Query: 998 PFDVPGAPGAPKGVDSTED-SISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHI 1056
PG P+ + I L W P DGGSPI Y VE I D+ +
Sbjct: 5 SSGPPGPCLPPRLQGRPKAKEIQLRWGPPLVDGGSPISCYSVEMSPIEKDEPREV--YQG 62
Query: 1057 PDTSLKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQ 1116
+ V+SL+ Y FR+ A N G
Sbjct: 63 SEVECT--------------------------------VSSLLPGKTYSFRLRAANKMGF 90
Query: 1117 GPWSSSSDIIMCCAPPCAP 1135
GP+S DI AP P
Sbjct: 91 GPFSEKCDITT--APGSGP 107
Score = 97.8 bits (244), Expect = 6e-24
Identities = 28/104 (26%), Positives = 37/104 (35%), Gaps = 4/104 (3%)
Query: 902 PHPPENLHA-DEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTKVSSYVTTPFV 960
P P + L W PP +GGS I+ Y VE +V
Sbjct: 9 PGPCLPPRLQGRPKAKEIQLRWGPPLVDGGSPISCYSVEMSPIEKDEPREVYQGSEVECT 68
Query: 961 RVRNLAIGSTYEFRVMAENQYGLSKPALTIDPIKAKHPFDVPGA 1004
V +L G TY FR+ A N+ G + D A P P +
Sbjct: 69 -VSSLLPGKTYSFRLRAANKMGFGPFSEKCDITTA--PGSGPSS 109
Score = 93.2 bits (232), Expect = 2e-22
Identities = 24/94 (25%), Positives = 40/94 (42%), Gaps = 3/94 (3%)
Query: 378 PSPPGIP-VVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQ 436
P P P + + + L W PL DGGS I Y ++ + D + V + +
Sbjct: 9 PGPCLPPRLQGRPKAKEIQLRWGPPLVDGGSPISCYSVEMSPIEKDEPREVYQ--GSEVE 66
Query: 437 INIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSV 470
+ +L+ G+ Y FR+ A N+ G S +
Sbjct: 67 CTVSSLLPGKTYSFRLRAANKMGFGPFSEKCDIT 100
Score = 93.2 bits (232), Expect = 2e-22
Identities = 24/94 (25%), Positives = 40/94 (42%), Gaps = 3/94 (3%)
Query: 1985 PSPPGIP-VVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQ 2043
P P P + + + L W PL DGGS I Y ++ + D + V + +
Sbjct: 9 PGPCLPPRLQGRPKAKEIQLRWGPPLVDGGSPISCYSVEMSPIEKDEPREVYQ--GSEVE 66
Query: 2044 INIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSV 2077
+ +L+ G+ Y FR+ A N+ G S +
Sbjct: 67 CTVSSLLPGKTYSFRLRAANKMGFGPFSEKCDIT 100
Score = 76.6 bits (189), Expect = 1e-16
Identities = 27/128 (21%), Positives = 34/128 (26%), Gaps = 47/128 (36%)
Query: 1560 DSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEGK 1619
I L W P DGGSPI Y VE I D+ +
Sbjct: 20 RPKAKEIQLRWGPPLVDGGSPISCYSVEMSPIEKDEPREV-------------------- 59
Query: 1620 SIGSERGSTAQFLEREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSE 1679
Y E +V +L+ G Y FR+ A N +G
Sbjct: 60 ---------------------------YQGSEVECTVSSLLPGKTYSFRLRAANKMGFGP 92
Query: 1680 PSICTTPV 1687
S
Sbjct: 93 FSEKCDIT 100
Score = 66.2 bits (162), Expect = 5e-13
Identities = 15/60 (25%), Positives = 23/60 (38%), Gaps = 2/60 (3%)
Query: 21 CYIIERREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPSICTTPV 80
CY +E + + Y E +V +L+ G Y FR+ A N +G S
Sbjct: 43 CYSVEMSPIEKDEPREV--YQGSEVECTVSSLLPGKTYSFRLRAANKMGFGPFSEKCDIT 100
Score = 50.4 bits (121), Expect = 2e-07
Identities = 15/66 (22%), Positives = 22/66 (33%), Gaps = 2/66 (3%)
Query: 1328 PFTVPDPPGQPQIVDWDTNN-ATLMWDRPRTDGGSKIQGYKMLLKTPTGELPTTIWSKIR 1386
P P P++ L W P DGGS I Y + + + P ++
Sbjct: 5 SSGPPGPCLPPRLQGRPKAKEIQLRWGPPLVDGGSPISCYSVEMSPIEKDEPREVYQ-GS 63
Query: 1387 PTSSTV 1392
TV
Sbjct: 64 EVECTV 69
>2gee_A Hypothetical protein; fibronectin, EIIIB, cancer,
neovascularization, cell adhesion, protein binding,
oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A
Length = 203
Score = 116 bits (291), Expect = 3e-29
Identities = 40/217 (18%), Positives = 68/217 (31%), Gaps = 19/217 (8%)
Query: 252 GDYTVNLSNSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTH 311
G + +SSG V +P P L +IT + L W P +
Sbjct: 2 GSSHHHHHHSSGLVPRGSH---MEVPQPTD--LSFVDITDSSIGLRWTPL---NSSTIIG 53
Query: 312 YVVERRDISMPHWI-CISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIK 370
Y + I + V GL G +Y V V G P +
Sbjct: 54 YRITVVAAGEGIPIFEDFVDSSVGYYTVTGLEPGIDYDISVYTVKNGGESTPTT----LT 109
Query: 371 AKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVA 430
++ PP T +G D + ++W P + + + V ++
Sbjct: 110 QQTA---VPPPTDLRFTNIGPDTMRVTWAPPP---SIDLTNFLVRYSPVKNEEDVAELSI 163
Query: 431 ICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSAS 467
+ + + + NL+ G +Y V + E S P
Sbjct: 164 SPSDNAVVLTNLLPGTEYVVSVSSVYEQHESTPLRGR 200
Score = 116 bits (291), Expect = 3e-29
Identities = 40/217 (18%), Positives = 68/217 (31%), Gaps = 19/217 (8%)
Query: 1859 GDYTVNLSNSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTH 1918
G + +SSG V +P P L +IT + L W P +
Sbjct: 2 GSSHHHHHHSSGLVPRGSH---MEVPQPTD--LSFVDITDSSIGLRWTPL---NSSTIIG 53
Query: 1919 YVVERRDISMPHWI-CISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIK 1977
Y + I + V GL G +Y V V G P +
Sbjct: 54 YRITVVAAGEGIPIFEDFVDSSVGYYTVTGLEPGIDYDISVYTVKNGGESTPTT----LT 109
Query: 1978 AKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVA 2037
++ PP T +G D + ++W P + + + V ++
Sbjct: 110 QQTA---VPPPTDLRFTNIGPDTMRVTWAPPP---SIDLTNFLVRYSPVKNEEDVAELSI 163
Query: 2038 ICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSAS 2074
+ + + + NL+ G +Y V + E S P
Sbjct: 164 SPSDNAVVLTNLLPGTEYVVSVSSVYEQHESTPLRGR 200
Score = 102 bits (257), Expect = 1e-24
Identities = 30/221 (13%), Positives = 59/221 (26%), Gaps = 46/221 (20%)
Query: 904 PPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTKVSSY-VTTPFVRV 962
P +L + S+ L WTP S I Y + + + + V
Sbjct: 25 QPTDLSFVDITDSSIGLRWTPL---NSSTIIGYRITVVAAGEGIPIFEDFVDSSVGYYTV 81
Query: 963 RNLAIGSTYEFRVMAENQYGLSKPALTIDPIKAKHPFDVPGAPGAPKGVDSTEDSISLVW 1022
L G Y+ V G S P P + + D++ + W
Sbjct: 82 TGLEPGIDYDISVYTVKNGGESTPTTL-------TQQTAVPPPTDLRFTNIGPDTMRVTW 134
Query: 1023 SKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEGKSIGSERGSTAQ 1082
+ P + ++V + +++ + D ++
Sbjct: 135 APPP---SIDLTNFLVRYSPVKNEEDVAELSISPSDNAVV-------------------- 171
Query: 1083 FLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPWSSSS 1123
+T+L+ EY V +V +
Sbjct: 172 ------------LTNLLPGTEYVVSVSSVYEQHESTPLRGR 200
Score = 93.0 bits (231), Expect = 4e-21
Identities = 35/182 (19%), Positives = 53/182 (29%), Gaps = 17/182 (9%)
Query: 1214 NTVGSDSASCKVYVVDKPSPPQGP--LDVSDITPESCSLSWKPPLDDGGSPITNYVVEKY 1271
++ S + P L DIT S L W P S I Y +
Sbjct: 3 SSHHHHHHSSGLVPRGSHMEVPQPTDLSFVDITDSSIGLRWTPL---NSSTIIGYRITVV 59
Query: 1272 ESATGFWSKLSSFVRSPA-YDVFGLETNRQYRFRVRAENQYGVSEPLELDNSITAKFPFT 1330
+ G S Y V GLE Y V G S P ++T + T
Sbjct: 60 AAGEGIPIFEDFVDSSVGYYTVTGLEPGIDYDISVYTVKNGGESTPT----TLTQQ---T 112
Query: 1331 VPDPPGQPQIVDWDTNNATLMWDRPRTDGGSKIQGYKMLLKTPTGELPTTIWSKIRPTSS 1390
PP + + + + W P + + + +P I P+ +
Sbjct: 113 AVPPPTDLRFTNIGPDTMRVTWAPPP---SIDLTNFL-VRYSPVKNEEDVAELSISPSDN 168
Query: 1391 TV 1392
V
Sbjct: 169 AV 170
Score = 79.5 bits (196), Expect = 2e-16
Identities = 21/112 (18%), Positives = 38/112 (33%), Gaps = 6/112 (5%)
Query: 648 RVVAENDLGMDSAIVKIQISDRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVE 707
V + G +S + PP +IG D++ + W P ++TN++V
Sbjct: 93 SVYTVKNGG-ESTPTTLTQQTAVPPPTDLRFTNIGPDTMRVTWAPP---PSIDLTNFLVR 148
Query: 708 KREHPMSSWIRV--GNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTS 757
+ + + +T L PG +Y V + S P
Sbjct: 149 YSPVKNEEDVAELSISPSDNAVVLTNLLPGTEYVVSVSSVYEQHESTPLRGR 200
Score = 75.6 bits (186), Expect = 3e-15
Identities = 24/101 (23%), Positives = 34/101 (33%), Gaps = 5/101 (4%)
Query: 659 SAIVKIQISDRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSWIR 718
S +V P + DI S+ L W S I Y + I
Sbjct: 12 SGLVPRGSHMEVPQPTDLSFVDITDSSIGLRWTPL---NSSTIIGYRITVVAAGEGIPIF 68
Query: 719 VG--NTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTS 757
++ +TGL PG Y+ VY G S P+T +
Sbjct: 69 EDFVDSSVGYYTVTGLEPGIDYDISVYTVKNGGESTPTTLT 109
Score = 64.8 bits (158), Expect = 1e-11
Identities = 27/142 (19%), Positives = 47/142 (33%), Gaps = 15/142 (10%)
Query: 1186 ETSENQTIYRNKSAKRATDSG-----SYTIQL--VNTVGSDSASCKVYVVDKPSPPQGPL 1238
E + + S T +G Y I + V G +S + PP L
Sbjct: 63 EGIPIFEDFVDSSVGYYTVTGLEPGIDYDISVYTVKNGG-ESTPTTLTQQTAVPPPTD-L 120
Query: 1239 DVSDITPESCSLSWKPPLDDGGSPITNYVVEKYESATGFWSKLSSFVRSPA--YDVFGLE 1296
++I P++ ++W PP +TN++V Y + + L
Sbjct: 121 RFTNIGPDTMRVTWAPPP---SIDLTNFLVR-YSPVKNEEDVAELSISPSDNAVVLTNLL 176
Query: 1297 TNRQYRFRVRAENQYGVSEPLE 1318
+Y V + + S PL
Sbjct: 177 PGTEYVVSVSSVYEQHESTPLR 198
Score = 60.2 bits (146), Expect = 5e-10
Identities = 19/88 (21%), Positives = 33/88 (37%), Gaps = 4/88 (4%)
Query: 901 RPHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTKVSSYVTTP-F 959
PP +L D++ + W PP ++TN++V + S +
Sbjct: 113 AVPPPTDLRFTNIGPDTMRVTWAPPP---SIDLTNFLVRYSPVKNEEDVAELSISPSDNA 169
Query: 960 VRVRNLAIGSTYEFRVMAENQYGLSKPA 987
V + NL G+ Y V + + S P
Sbjct: 170 VVLTNLLPGTEYVVSVSSVYEQHESTPL 197
Score = 51.4 bits (123), Expect = 7e-07
Identities = 22/156 (14%), Positives = 37/156 (23%), Gaps = 42/156 (26%)
Query: 992 PIKAKHPFDVPGAPGAPKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKA 1051
+ + P VD T+ SI L W+ S I Y + + I
Sbjct: 13 GLVPRGSHMEVPQPTDLSFVDITDSSIGLRWTPL---NSSTIIGYRITVVAAGEGIPIFE 69
Query: 1052 SMAHIPDTSLKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAV 1111
VT L +Y+ V V
Sbjct: 70 DFVDSSVGYY--------------------------------TVTGLEPGIDYDISVYTV 97
Query: 1112 NAAGQGPWSSSSDIIMCCAPPCAPKITSDLSIRDMT 1147
G+ ++ + P +DL ++
Sbjct: 98 KNGGESTPTTLTQQ----TAVPPP---TDLRFTNIG 126
Score = 47.9 bits (114), Expect = 1e-05
Identities = 14/57 (24%), Positives = 23/57 (40%)
Query: 22 YIIERREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPSICTT 78
Y I G I + + + ++V L G DY+ + V G+S P+ T
Sbjct: 54 YRITVVAAGEGIPIFEDFVDSSVGYYTVTGLEPGIDYDISVYTVKNGGESTPTTLTQ 110
Score = 44.0 bits (104), Expect = 2e-04
Identities = 24/173 (13%), Positives = 41/173 (23%), Gaps = 49/173 (28%)
Query: 1559 VDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSL--------- 1609
VD T+ SI L W+ S I Y + + I
Sbjct: 32 VDITDSSIGLRWTPL---NSSTIIGYRITVVAAGEGIPIFEDFVDSSVGYYTVTGLEPGI 88
Query: 1610 KYVLWVSEGKSIGSERGSTAQFLE------------------------------------ 1633
Y + V K+ G +T
Sbjct: 89 DYDISVYTVKNGGESTPTTLTQQTAVPPPTDLRFTNIGPDTMRVTWAPPPSIDLTNFLVR 148
Query: 1634 -REVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPSICTT 1685
V + + + + + NL+ G +Y + +V +S P
Sbjct: 149 YSPVKNEEDVAELSISPSDNAVVLTNLLPGTEYVVSVSSVYEQHESTPLRGRQ 201
Score = 42.1 bits (99), Expect = 8e-04
Identities = 8/57 (14%), Positives = 21/57 (36%)
Query: 22 YIIERREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPSICTT 78
+++ V + + + + + NL+ G +Y + +V +S P
Sbjct: 145 FLVRYSPVKNEEDVAELSISPSDNAVVLTNLLPGTEYVVSVSSVYEQHESTPLRGRQ 201
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular
adhesion, ligand-independent DIME mutational analysis,
transferase; HET: EPE; 1.96A {Homo sapiens} SCOP:
b.1.1.1 b.1.1.4
Length = 182
Score = 115 bits (289), Expect = 3e-29
Identities = 38/193 (19%), Positives = 69/193 (35%), Gaps = 19/193 (9%)
Query: 480 APEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTY--T 537
+++ Q + C++ G +P I W+K + + +I +
Sbjct: 2 GLKLMGAPVKLTVSQGQPVKLNCSVEGMEEPDIQWVKDGAVVQNLDQLYIPVSEQHWIGF 61
Query: 538 LIINSVYGVDADEYVCRAVNKGGVK-STKAELIIMTAPKFNVPPRFRDTAYFDKGENVVV 596
L + SV DA Y C+ + G + S L + P F V P +D A +
Sbjct: 62 LSLKSVERSDAGRYWCQVEDGGETEISQPVWLTVEGVPFFTVEP--KDLAV-PPNAPFQL 118
Query: 597 KIPFTGYPKP-KITWYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAPYRVVAENDL 655
G P+P I W+R I + ++L + + + + A N
Sbjct: 119 SCEAVGPPEPVTIVWWRGTTKIG-------GPAPSPSVLNVTGVT--QSTMFSCEAHNLK 169
Query: 656 GMD---SAIVKIQ 665
G+ +A V +Q
Sbjct: 170 GLASSRTATVHLQ 182
Score = 107 bits (269), Expect = 2e-26
Identities = 26/188 (13%), Positives = 61/188 (32%), Gaps = 14/188 (7%)
Query: 91 PDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAG--GVFRL 148
+ L V G+ + L C G P +W+++G + + + + + + L
Sbjct: 3 LKLMGAPVKLTVSQGQPVKLNCSVEGMEEPDIQWVKDGAVVQNLDQLYIPVSEQHWIGFL 62
Query: 149 HFNEVTDVDNGDYTCEAYNSVGFAHTSS-RVKIGTPPRIDRMPNALYIPEGDNTKVKIFY 207
V D G Y C+ + + + + P P L +P ++
Sbjct: 63 SLKSVERSDAGRYWCQVEDGGETEISQPVWLTVEGVPFFTVEPKDLAVPPNAPFQLSCEA 122
Query: 208 AGD-QPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSV- 265
G +P+ + + + ++ + + ++ N G
Sbjct: 123 VGPPEPVTIVWWRGTTKIGGPA-------PSPSVLNV--TGVTQSTMFSCEAHNLKGLAS 173
Query: 266 SGTFTINI 273
S T T+++
Sbjct: 174 SRTATVHL 181
Score = 107 bits (269), Expect = 2e-26
Identities = 26/188 (13%), Positives = 61/188 (32%), Gaps = 14/188 (7%)
Query: 1698 PDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAG--GVFRL 1755
+ L V G+ + L C G P +W+++G + + + + + + L
Sbjct: 3 LKLMGAPVKLTVSQGQPVKLNCSVEGMEEPDIQWVKDGAVVQNLDQLYIPVSEQHWIGFL 62
Query: 1756 HFNEVTDVDNGDYTCEAYNSVGFAHTSS-RVKIGTPPRIDRMPNALYIPEGDNTKVKIFY 1814
V D G Y C+ + + + + P P L +P ++
Sbjct: 63 SLKSVERSDAGRYWCQVEDGGETEISQPVWLTVEGVPFFTVEPKDLAVPPNAPFQLSCEA 122
Query: 1815 AGD-QPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSV- 1872
G +P+ + + + ++ + + ++ N G
Sbjct: 123 VGPPEPVTIVWWRGTTKIGGPA-------PSPSVLNV--TGVTQSTMFSCEAHNLKGLAS 173
Query: 1873 SGTFTINI 1880
S T T+++
Sbjct: 174 SRTATVHL 181
Score = 88.3 bits (219), Expect = 8e-20
Identities = 25/122 (20%), Positives = 45/122 (36%), Gaps = 5/122 (4%)
Query: 2087 APEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTY--T 2144
+++ Q + C++ G +P I W+K + + +I +
Sbjct: 2 GLKLMGAPVKLTVSQGQPVKLNCSVEGMEEPDIQWVKDGAVVQNLDQLYIPVSEQHWIGF 61
Query: 2145 LIINSVYGVDADEYVCRAVNKGGVK-STKAELIIMTAPKFNVPPRFRDTAYFESDVVVVV 2203
L + SV DA Y C+ + G + S L + P F V P +D A + +
Sbjct: 62 LSLKSVERSDAGRYWCQVEDGGETEISQPVWLTVEGVPFFTVEP--KDLAVPPNAPFQLS 119
Query: 2204 CV 2205
C
Sbjct: 120 CE 121
Score = 69.4 bits (170), Expect = 2e-13
Identities = 20/118 (16%), Positives = 40/118 (33%), Gaps = 17/118 (14%)
Query: 2061 AQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKP-TI 2119
++ + S + ++ P V ++ N Q C G P+P TI
Sbjct: 79 VEDGGETEI--SQPVWLTVEGV-----PFFTVEPKDLAVPPNAPFQLSCEAVGPPEPVTI 131
Query: 2120 SWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELII 2177
W +G+ +I ++N + + C A N G+ S++ +
Sbjct: 132 VWWRGTTKIGGP---------APSPSVLNVTGVTQSTMFSCEAHNLKGLASSRTATVH 180
Score = 66.4 bits (162), Expect = 3e-12
Identities = 28/90 (31%), Positives = 36/90 (40%), Gaps = 12/90 (13%)
Query: 89 EKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKC-RWLRNGREISSGARYRVETAGGVFR 147
P F V KDL VP L CEA G P P W R +I + V
Sbjct: 97 GVPFFTVEPKDLAVPPNAPFQLSCEAVGPPEPVTIVWWRGTTKIGG-----PAPSPSVLN 151
Query: 148 LHFNEVTDV-DNGDYTCEAYNSVGFAHTSS 176
VT V + ++CEA+N G A + +
Sbjct: 152 -----VTGVTQSTMFSCEAHNLKGLASSRT 176
Score = 66.4 bits (162), Expect = 3e-12
Identities = 28/90 (31%), Positives = 36/90 (40%), Gaps = 12/90 (13%)
Query: 1696 EKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKC-RWLRNGREISSGARYRVETAGGVFR 1754
P F V KDL VP L CEA G P P W R +I + V
Sbjct: 97 GVPFFTVEPKDLAVPPNAPFQLSCEAVGPPEPVTIVWWRGTTKIGG-----PAPSPSVLN 151
Query: 1755 LHFNEVTDV-DNGDYTCEAYNSVGFAHTSS 1783
VT V + ++CEA+N G A + +
Sbjct: 152 -----VTGVTQSTMFSCEAHNLKGLASSRT 176
Score = 47.5 bits (113), Expect = 8e-06
Identities = 22/98 (22%), Positives = 45/98 (45%), Gaps = 3/98 (3%)
Query: 183 PPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIF 242
++ P L + +G K+ G + ++ K+G VVQ+ D+ V + + I F
Sbjct: 2 GLKLMGAPVKLTVSQGQPVKLNCSVEGMEEPDIQWVKDGAVVQNLDQLYIPVSEQHWIGF 61
Query: 243 --IKEIRKEDAGDYTVNLSNSSGS-VSGTFTINITGLP 277
+K + + DAG Y + + + +S + + G+P
Sbjct: 62 LSLKSVERSDAGRYWCQVEDGGETEISQPVWLTVEGVP 99
Score = 47.5 bits (113), Expect = 8e-06
Identities = 22/98 (22%), Positives = 45/98 (45%), Gaps = 3/98 (3%)
Query: 1790 PPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIF 1849
++ P L + +G K+ G + ++ K+G VVQ+ D+ V + + I F
Sbjct: 2 GLKLMGAPVKLTVSQGQPVKLNCSVEGMEEPDIQWVKDGAVVQNLDQLYIPVSEQHWIGF 61
Query: 1850 --IKEIRKEDAGDYTVNLSNSSGS-VSGTFTINITGLP 1884
+K + + DAG Y + + + +S + + G+P
Sbjct: 62 LSLKSVERSDAGRYWCQVEDGGETEISQPVWLTVEGVP 99
Score = 45.6 bits (108), Expect = 4e-05
Identities = 24/111 (21%), Positives = 42/111 (37%), Gaps = 6/111 (5%)
Query: 1134 APKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQTI 1193
K+ +TV G+ + G +P W +G V ++ SE I
Sbjct: 2 GLKLMGAPV--KLTVSQGQPVKLNCSVEGMEEPDIQWVKDGAVVQNLDQLYIPVSEQHWI 59
Query: 1194 Y--RNKSAKRATDSGSYTIQLVNTVGSD-SASCKVYVVDKPSPPQGPLDVS 1241
KS +R +D+G Y Q+ + ++ S + V P P D++
Sbjct: 60 GFLSLKSVER-SDAGRYWCQVEDGGETEISQPVWLTVEGVPFFTVEPKDLA 109
Score = 40.6 bits (95), Expect = 0.002
Identities = 15/90 (16%), Positives = 31/90 (34%), Gaps = 13/90 (14%)
Query: 1134 APKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPI-WTVNGDEVSPDGRIKFETSENQT 1192
P T + +D+ V F ++ G P+P I W ++ + + +
Sbjct: 98 VPFFTVEP--KDLAVPPNAPFQLSCEAVGPPEPVTIVWWRGTTKIGGP-------APSPS 148
Query: 1193 IYRNKSAKRATDSGSYTIQLVNTVGSDSAS 1222
+ T S ++ + N G S+
Sbjct: 149 VLNV---TGVTQSTMFSCEAHNLKGLASSR 175
Score = 40.2 bits (94), Expect = 0.002
Identities = 15/85 (17%), Positives = 34/85 (40%), Gaps = 4/85 (4%)
Query: 1430 RDITVKAGEDFSIHVPFMAFPQPAAFWFANDSIIDDSD-TRVHKQLTMNSASLVVKNSQR 1488
+TV G+ ++ +P W + +++ + D + L +K+ +R
Sbjct: 10 VKLTVSQGQPVKLNCSVEGMEEPDIQWVKDGAVVQNLDQLYIPVSEQHWIGFLSLKSVER 69
Query: 1489 SDGGQYRLQLKNPAGFD---TATLH 1510
SD G+Y Q+++ + L
Sbjct: 70 SDAGRYWCQVEDGGETEISQPVWLT 94
Score = 38.6 bits (90), Expect = 0.008
Identities = 14/85 (16%), Positives = 27/85 (31%), Gaps = 14/85 (16%)
Query: 1430 RDITVKAGEDFSIHVPFMAFPQPAA-FWFANDSIIDDSDTRVHKQLTMNSASLVVKNSQR 1488
+D+ V F + + P+P W+ + I V+ +
Sbjct: 106 KDLAVPPNAPFQLSCEAVGPPEPVTIVWWRGTTKIGGPAPS----------PSVLNVTGV 155
Query: 1489 SDGGQYRLQLKNPAGFD---TATLH 1510
+ + + N G TAT+H
Sbjct: 156 TQSTMFSCEAHNLKGLASSRTATVH 180
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical
bundle cytokine, CY receptor complex, extracellular
complex; HET: NAG; 4.30A {Homo sapiens}
Length = 423
Score = 121 bits (304), Expect = 7e-29
Identities = 31/229 (13%), Positives = 56/229 (24%), Gaps = 24/229 (10%)
Query: 449 EFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTIT-GC 507
+ R A+NE G + I L +C
Sbjct: 205 DIRCCARNELG----RECTRLFTIDLN-----QTPQTTLPQLFLKVGEPLWIRCKAVHVN 255
Query: 508 PKPTISWLKGSREITPSARHHIFAEGDTY------TLIINSVYGVDADEYVCRAVNKGGV 561
++W ++ + + ++SV D Y C +
Sbjct: 256 HGFGLTWELENKALEEGNYFEMSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSSKHPS- 314
Query: 562 KSTKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGG 621
A + I+ N D D+ E + F YP+ + TW +
Sbjct: 315 --QSALVTIVEKGFINATNSSEDYEI-DQYEEFCFSVRFKAYPQIRCTWTFSRKSFPCEQ 371
Query: 622 HFHVETSERHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQISDRP 670
++ Y AEND + + + I
Sbjct: 372 KGLDNGYS----ISKFCNHKHQPGEYIFHAENDDAQFTKMFTLNIRSGT 416
Score = 117 bits (295), Expect = 9e-28
Identities = 44/262 (16%), Positives = 82/262 (31%), Gaps = 36/262 (13%)
Query: 34 WLKC---------NDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPSICTTPVKICE 84
W+ C V++ VL+ + G D R A N +G+ + T +
Sbjct: 173 WVLCDSQGESCKEESPAVVKKEEKVLHELFGTDI--RCCARNELGRECTRLFTIDLN--- 227
Query: 85 FVGGEKPDFIVPLKDLVVPLGKLLTLQCEAT-GTPVPKCRWLRNGREISSGARYRVETAG 143
L L + +G+ L ++C+A W + + G + + T
Sbjct: 228 ------QTPQTTLPQLFLKVGEPLWIRCKAVHVNHGFGLTWELENKALEEGNYFEMSTYS 281
Query: 144 GVFR------LHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMP--NALYI 195
+ V D G YTC + S+ V I I+ I
Sbjct: 282 TNRTMIRILFAFVSSVARNDTGYYTCSSSKHPS---QSALVTIVEKGFINATNSSEDYEI 338
Query: 196 PEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYT 255
+ + + + + + T + + + + LD+ I K G+Y
Sbjct: 339 DQYEEFCFSVRFKAYPQIRCTWTFSRKSFPCEQKG----LDNGYSISKFCNHKHQPGEYI 394
Query: 256 VNLSNSSGSVSGTFTINITGLP 277
+ N + FT+NI
Sbjct: 395 FHAENDDAQFTKMFTLNIRSGT 416
Score = 117 bits (295), Expect = 9e-28
Identities = 44/262 (16%), Positives = 82/262 (31%), Gaps = 36/262 (13%)
Query: 1641 WLKC---------NDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPSICTTPVKICE 1691
W+ C V++ VL+ + G D R A N +G+ + T +
Sbjct: 173 WVLCDSQGESCKEESPAVVKKEEKVLHELFGTDI--RCCARNELGRECTRLFTIDLN--- 227
Query: 1692 FVGGEKPDFIVPLKDLVVPLGKLLTLQCEAT-GTPVPKCRWLRNGREISSGARYRVETAG 1750
L L + +G+ L ++C+A W + + G + + T
Sbjct: 228 ------QTPQTTLPQLFLKVGEPLWIRCKAVHVNHGFGLTWELENKALEEGNYFEMSTYS 281
Query: 1751 GVFR------LHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMP--NALYI 1802
+ V D G YTC + S+ V I I+ I
Sbjct: 282 TNRTMIRILFAFVSSVARNDTGYYTCSSSKHPS---QSALVTIVEKGFINATNSSEDYEI 338
Query: 1803 PEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYT 1862
+ + + + + + T + + + + LD+ I K G+Y
Sbjct: 339 DQYEEFCFSVRFKAYPQIRCTWTFSRKSFPCEQKG----LDNGYSISKFCNHKHQPGEYI 394
Query: 1863 VNLSNSSGSVSGTFTINITGLP 1884
+ N + FT+NI
Sbjct: 395 FHAENDDAQFTKMFTLNIRSGT 416
Score = 115 bits (289), Expect = 5e-27
Identities = 43/439 (9%), Positives = 116/439 (26%), Gaps = 53/439 (12%)
Query: 151 NEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGD 210
N+ + + Y + + ++ + + A+ + + +++
Sbjct: 20 NDSSVGKSSSYPMVSESPED---LGCALRPQSSGTV-YEAAAVEVDVSASITLQVLVDAP 75
Query: 211 QPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFT 270
+ + F + + I ++ + AG+Y + + + + + + FT
Sbjct: 76 GNISCLWVFKHSSLNCQPHFDLQNRGV-VSMVILKMTETQAGEYLLFIQSEATNYTILFT 134
Query: 271 INITGLPGPPIGPLDVSEITKHT---CTLHWNP-PKYDGGLKVTHYVVERRDISMPHWIC 326
++I + ++ C P P +V+
Sbjct: 135 VSIRNTLLYTLRRPYFRKMENQDALVCISESVPEPIV-------EWVLCDSQGESCKEES 187
Query: 327 ISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGP---PLEGINPIKAKSPYDKPSPPGI 383
+ + + + G + A NE G +N + G
Sbjct: 188 PAVVKKEEKVLHE--LFGTDI--RCCARNELGRECTRLFTIDLNQTPQTTLPQLFLKVGE 243
Query: 384 PVV---TQVGGDF-VNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINI 439
P+ V + L+W+ + + +G + + ++ +
Sbjct: 244 PLWIRCKAVHVNHGFGLTWEL---ENKALEEGNYFEMSTYSTNRTMIRI------LFAFV 294
Query: 440 PNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNAN--AIQNHN 497
++ + + S V I + I + + Q
Sbjct: 295 SSVARNDTGYYTCSSSKHPS------QSALVTIVEK-----GFINATNSSEDYEIDQYEE 343
Query: 498 AQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVN 557
F P+ +W + + + Y++ + EY+ A N
Sbjct: 344 FCFSVRFKAYPQIRCTWTFSRKSFPCEQKGL----DNGYSISKFCNHKHQPGEYIFHAEN 399
Query: 558 KGGVKSTKAELIIMTAPKF 576
+ L I + K
Sbjct: 400 DDAQFTKMFTLNIRSGTKH 418
Score = 115 bits (289), Expect = 5e-27
Identities = 43/439 (9%), Positives = 116/439 (26%), Gaps = 53/439 (12%)
Query: 1758 NEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGD 1817
N+ + + Y + + ++ + + A+ + + +++
Sbjct: 20 NDSSVGKSSSYPMVSESPED---LGCALRPQSSGTV-YEAAAVEVDVSASITLQVLVDAP 75
Query: 1818 QPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFT 1877
+ + F + + I ++ + AG+Y + + + + + + FT
Sbjct: 76 GNISCLWVFKHSSLNCQPHFDLQNRGV-VSMVILKMTETQAGEYLLFIQSEATNYTILFT 134
Query: 1878 INITGLPGPPIGPLDVSEITKHT---CTLHWNP-PKYDGGLKVTHYVVERRDISMPHWIC 1933
++I + ++ C P P +V+
Sbjct: 135 VSIRNTLLYTLRRPYFRKMENQDALVCISESVPEPIV-------EWVLCDSQGESCKEES 187
Query: 1934 ISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGP---PLEGINPIKAKSPYDKPSPPGI 1990
+ + + + G + A NE G +N + G
Sbjct: 188 PAVVKKEEKVLHE--LFGTDI--RCCARNELGRECTRLFTIDLNQTPQTTLPQLFLKVGE 243
Query: 1991 PVV---TQVGGDF-VNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINI 2046
P+ V + L+W+ + + +G + + ++ +
Sbjct: 244 PLWIRCKAVHVNHGFGLTWEL---ENKALEEGNYFEMSTYSTNRTMIRI------LFAFV 294
Query: 2047 PNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNAN--AIQNHN 2104
++ + + S V I + I + + Q
Sbjct: 295 SSVARNDTGYYTCSSSKHPS------QSALVTIVEK-----GFINATNSSEDYEIDQYEE 343
Query: 2105 AQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVN 2164
F P+ +W + + + Y++ + EY+ A N
Sbjct: 344 FCFSVRFKAYPQIRCTWTFSRKSFPCEQKGL----DNGYSISKFCNHKHQPGEYIFHAEN 399
Query: 2165 KGGVKSTKAELIIMTAPKF 2183
+ L I + K
Sbjct: 400 DDAQFTKMFTLNIRSGTKH 418
Score = 114 bits (286), Expect = 1e-26
Identities = 27/235 (11%), Positives = 62/235 (26%), Gaps = 14/235 (5%)
Query: 62 IIAVNAIGKSEPSICTTPVKICEFVGG-------EKPDFIVPLKDLVVPLGKLLTLQCEA 114
++ + S ++ + E + + + V + +TLQ
Sbjct: 13 VLINHKNNDSSVGKSSSYPMVSESPEDLGCALRPQSSGTVYEAAAVEVDVSASITLQVLV 72
Query: 115 TGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHT 174
C W+ ++ + ++ GV + ++T+ G+Y +
Sbjct: 73 DAPGNISCLWVFKHSSLNCQPHFDLQN-RGVVSMVILKMTETQAGEYLLFIQSEATNYTI 131
Query: 175 SSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTV 234
V I E + + V +S V
Sbjct: 132 LFTVSIRNTLLYTLRRPYFRKMENQDA-LVCISESVPEPIVEWVLCDSQGESCKEESPAV 190
Query: 235 LDDYIIIFIKEIRKEDAGDYTVNLSNSSGSV-SGTFTINITGLPGPPIGPLDVSE 288
+ + + + D N G + FTI++ P + L +
Sbjct: 191 VKKEEKV----LHELFGTDIRCCARNELGRECTRLFTIDLNQTPQTTLPQLFLKV 241
Score = 114 bits (286), Expect = 1e-26
Identities = 27/235 (11%), Positives = 62/235 (26%), Gaps = 14/235 (5%)
Query: 1669 IIAVNAIGKSEPSICTTPVKICEFVGG-------EKPDFIVPLKDLVVPLGKLLTLQCEA 1721
++ + S ++ + E + + + V + +TLQ
Sbjct: 13 VLINHKNNDSSVGKSSSYPMVSESPEDLGCALRPQSSGTVYEAAAVEVDVSASITLQVLV 72
Query: 1722 TGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHT 1781
C W+ ++ + ++ GV + ++T+ G+Y +
Sbjct: 73 DAPGNISCLWVFKHSSLNCQPHFDLQN-RGVVSMVILKMTETQAGEYLLFIQSEATNYTI 131
Query: 1782 SSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTV 1841
V I E + + V +S V
Sbjct: 132 LFTVSIRNTLLYTLRRPYFRKMENQDA-LVCISESVPEPIVEWVLCDSQGESCKEESPAV 190
Query: 1842 LDDYIIIFIKEIRKEDAGDYTVNLSNSSGSV-SGTFTINITGLPGPPIGPLDVSE 1895
+ + + + D N G + FTI++ P + L +
Sbjct: 191 VKKEEKV----LHELFGTDIRCCARNELGRECTRLFTIDLNQTPQTTLPQLFLKV 241
Score = 112 bits (280), Expect = 7e-26
Identities = 35/309 (11%), Positives = 94/309 (30%), Gaps = 21/309 (6%)
Query: 454 AQNEAGLSLPSS----ASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPK 509
N++ + SS + + + + ++ + + + Q +
Sbjct: 18 KNNDSSVGKSSSYPMVSESPEDLGCALRPQSSGTVYEAAAVEVDVSASITLQVLVDAPGN 77
Query: 510 PTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELI 569
+ W+ + + G +++I + A EY+ ++ + +
Sbjct: 78 ISCLWVFKHSSLNCQPHFDLQNRGVV-SMVILKMTETQAGEYLLFIQSEATNYTILFTVS 136
Query: 570 IMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSE 629
I + + + + P+P + W + ES +
Sbjct: 137 IRNTLLYTLRRPYFRKM----ENQDALVCISESVPEPIVEWVLCDSQGESCKEESPAVVK 192
Query: 630 RHAILTIRDASNVDTAPYRVVAENDLGMD-SAIVKIQISDRPDPPQFPTVEDIGHDSLAL 688
+ + + D R A N+LG + + + I ++ P +G + L +
Sbjct: 193 KE-EKVLHELFGTD---IRCCARNELGRECTRLFTIDLNQTPQTTLPQLFLKVG-EPLWI 247
Query: 689 VWRAPIWDGGSNIT----NYIVEKREHPMSSWIRVGNT--RFTTMAITGLSPGHQYEFRV 742
+A + G +T N +E+ + S T R ++ ++ +
Sbjct: 248 RCKAVHVNHGFGLTWELENKALEEGNYFEMSTYSTNRTMIRILFAFVSSVARNDTGYYTC 307
Query: 743 YAENVYGRS 751
+ +S
Sbjct: 308 SSSKHPSQS 316
Score = 103 bits (259), Expect = 4e-23
Identities = 46/399 (11%), Positives = 94/399 (23%), Gaps = 71/399 (17%)
Query: 1430 RDITVKAGEDFSIHVPFMAFPQPAAFWFANDSIIDDSDTRVHKQLTMNSASLVVKNSQRS 1489
+ V ++ V A + W S ++ S+V+ +
Sbjct: 56 AAVEVDVSASITLQVLVDAPGNISCLWVFKHSSLNCQPH--FDLQNRGVVSMVILKMTET 113
Query: 1490 DGGQYRLQLKNPAGFDTATLHSRLRTLPDSVNPRCHLPSSTSKERP-----KFPTHPNHQ 1544
G+Y L +++ A T +R R P E + P +
Sbjct: 114 QAGEYLLFIQSEATNYTILFTVSIRNTLLYTLRR---PYFRKMENQDALVCISESVP--E 168
Query: 1545 PWLKWARASLTSKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHI 1604
P ++W S S + V L D A
Sbjct: 169 PIVEWVLCD-------------SQGESCKEESPAVVKKEEKVLHELFGTDIRCCARNELG 215
Query: 1605 PDTSLKYVL-----WVSEGKSIGSERGSTAQFLEREVGGA-----IWLKCNDYNVLECSF 1654
+ + + + + + + G + V W + + E ++
Sbjct: 216 RECTRLFTIDLNQTPQTTLPQLFLKVGEPLWIRCKAVHVNHGFGLTWEL-ENKALEEGNY 274
Query: 1655 SVLNLVEGNDYEFRI------------------IAVNAIGKSEPSICTTPVKICEFVGGE 1696
++ N RI + +S V I E
Sbjct: 275 FEMSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSSKHPSQS------ALVTI-----VE 323
Query: 1697 KPDFIVPL--KDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFR 1754
K +D + + P +C W + + + +
Sbjct: 324 KGFINATNSSEDYEIDQYEEFCFSVRFKAYPQIRCTWTFSRKSFPCEQKGLDNG----YS 379
Query: 1755 LHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRI 1793
+ G+Y A N + I + +
Sbjct: 380 ISKFCNHKHQPGEYIFHAENDDAQFTKMFTLNIRSGTKH 418
Score = 98.2 bits (244), Expect = 3e-21
Identities = 51/402 (12%), Positives = 104/402 (25%), Gaps = 51/402 (12%)
Query: 1134 APKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQTI 1193
+ + + V T+ V + +W ++ + ++
Sbjct: 48 SSGTVYEA--AAVEVDVSASITLQVLVDAPGNISCLWVFKHSSLNCQPHFDLQNRGVVSM 105
Query: 1194 YRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYVVDKPSPPQGPLDVSDITPESCSLSWK 1253
K T +G Y + + + + + V + + +L
Sbjct: 106 VILKM--TETQAGEYLLFIQSEATNYTILFTVSIRNTLLYTLRRPYFR-KMENQDALVCI 162
Query: 1254 PPLDDGGSPITNYVVEKYESATGFWSKLSSFVRSPAYDVFGLETNRQYRFR--------V 1305
P W S S + + +
Sbjct: 163 S----ESVPEPIVE----------WVLCDSQGESCKEESPAVVKKEEKVLHELFGTDIRC 208
Query: 1306 RAENQYGVSEPLELDNSITAKFPFTVPD---PPGQPQIVDWDTNNA----TLMW---DRP 1355
A N+ G + T+P G+P + + L W ++
Sbjct: 209 CARNELGRECTRLFTIDLNQTPQTTLPQLFLKVGEPLWIRCKAVHVNHGFGLTWELENKA 268
Query: 1356 RTDGGSKIQGYKMLLKTPTGELPTTIWSKIRPTSSTVYCKDTTMNSSNSEPGKQSGPVIV 1415
+G +T L + S + + Y T +SS QS V +
Sbjct: 269 LEEGNYFEMSTYSTNRTMIRILFAFV-SSVARNDTGYY----TCSSSKHP--SQSALVTI 321
Query: 1416 EEQPNKPVMDLSGVRDITVKAGEDFSIHVPFMAFPQPAAFWFANDSIIDDSDTRVHKQLT 1475
E+ + + D + E+F V F A+PQ W + +
Sbjct: 322 VEKG--FINATNSSEDYEIDQYEEFCFSVRFKAYPQIRCTWTFSRKSFPCEQKGLD---- 375
Query: 1476 MNSASLVVKNSQRSDGGQYRLQLKNPAGFDTATLHSRLRTLP 1517
N S+ + + G+Y +N T +R+
Sbjct: 376 -NGYSISKFCNHKHQPGEYIFHAENDDAQFTKMFTLNIRSGT 416
Score = 77.8 bits (191), Expect = 1e-14
Identities = 13/149 (8%), Positives = 45/149 (30%), Gaps = 8/149 (5%)
Query: 2061 AQNEAGLSLPSS----ASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPK 2116
N++ + SS + + + + ++ + + + Q +
Sbjct: 18 KNNDSSVGKSSSYPMVSESPEDLGCALRPQSSGTVYEAAAVEVDVSASITLQVLVDAPGN 77
Query: 2117 PTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELI 2176
+ W+ + + G +++I + A EY+ ++ + +
Sbjct: 78 ISCLWVFKHSSLNCQPHFDLQNRGVV-SMVILKMTETQAGEYLLFIQSEATNYTILFTVS 136
Query: 2177 IMTAPKFNVPPRFRDTAYFESDVVVVVCV 2205
I + + + + +VC+
Sbjct: 137 IRNTLLYTLRRPYFRKM---ENQDALVCI 162
Score = 76.3 bits (187), Expect = 3e-14
Identities = 18/156 (11%), Positives = 35/156 (22%), Gaps = 19/156 (12%)
Query: 2056 EFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTIT-GC 2114
+ R A+NE G + I L +C
Sbjct: 205 DIRCCARNELG----RECTRLFTIDLN-----QTPQTTLPQLFLKVGEPLWIRCKAVHVN 255
Query: 2115 PKPTISWLKGSREITPSARHHIFAEGDTY------TLIINSVYGVDADEYVCRAVNKGGV 2168
++W ++ + + ++SV D Y C +
Sbjct: 256 HGFGLTWELENKALEEGNYFEMSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSSKHPS- 314
Query: 2169 KSTKAELIIMTAPKFNVPPRFRDTAYFESDVVVVVC 2204
A + I+ N D + +
Sbjct: 315 --QSALVTIVEKGFINATNSSEDYEIDQYEEFCFSV 348
Score = 74.3 bits (182), Expect = 2e-13
Identities = 11/100 (11%), Positives = 24/100 (24%), Gaps = 6/100 (6%)
Query: 89 EKPDFIVPL--KDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVF 146
EK +D + + P +C W + + + +
Sbjct: 323 EKGFINATNSSEDYEIDQYEEFCFSVRFKAYPQIRCTWTFSRKSFPCEQKGLDNG----Y 378
Query: 147 RLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRI 186
+ G+Y A N + I + +
Sbjct: 379 SISKFCNHKHQPGEYIFHAENDDAQFTKMFTLNIRSGTKH 418
Score = 67.0 bits (163), Expect = 3e-11
Identities = 22/147 (14%), Positives = 48/147 (32%), Gaps = 20/147 (13%)
Query: 2061 AQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTIS 2120
Q+EA + +V I++ + ++N +A C P+P +
Sbjct: 122 IQSEATNY---TILFTVSIRNT-----LLYTLRRPYFRKMENQDA-LVCISESVPEPIVE 172
Query: 2121 WLK--GSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIM 2178
W+ E + + +++ ++G D C A N+ G + T+ I +
Sbjct: 173 WVLCDSQGESCKEESPAVVKKE---EKVLHELFGTD---IRCCARNELGRECTRLFTIDL 226
Query: 2179 TAPKFNVPPRFRDTAYFESDVVVVVCV 2205
P + + + C
Sbjct: 227 NQTPQTTLP---QLFLKVGEPLWIRCK 250
>1x4z_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes
(CDON)binding...; fibronectin type III, FN3; NMR {Mus
musculus} SCOP: b.1.2.1
Length = 121
Score = 111 bits (280), Expect = 8e-29
Identities = 29/111 (26%), Positives = 45/111 (40%), Gaps = 5/111 (4%)
Query: 658 DSAIVKIQISDRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSS-W 716
+ P+ P PT+ S+ + W +GG I ++ VE ++ W
Sbjct: 6 SGSQPDHGRLSPPEAPDRPTISTASETSVYVTWIPR-GNGGFPIQSFRVEYKKLKKVGDW 64
Query: 717 IRVGNT---RFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKD 764
I + ++ ITGL G Y+FRV A N+ G S+PS S
Sbjct: 65 ILATSAIPPSRLSVEITGLEKGISYKFRVRALNMLGESEPSAPSRPYVVSG 115
Score = 108 bits (272), Expect = 1e-27
Identities = 33/123 (26%), Positives = 50/123 (40%), Gaps = 7/123 (5%)
Query: 1215 TVGSDSASCKVYVVDKPSPPQGPLDVSDITPESCSLSWKPPLDDGGSPITNYVVEKYE-S 1273
+ GS + + P P P +S + S ++W P +GG PI ++ VE +
Sbjct: 2 SSGSSGSQPDHGRLSPPEAPDRPT-ISTASETSVYVTWIPR-GNGGFPIQSFRVEYKKLK 59
Query: 1274 ATGFWSKLSSFV--RSPAYDVFGLETNRQYRFRVRAENQYGVSEPLELDNSITAKFPFTV 1331
G W +S + + ++ GLE Y+FRVRA N G SEP
Sbjct: 60 KVGDWILATSAIPPSRLSVEITGLEKGISYKFRVRALNMLGESEPSAPSRPYVVSGS--G 117
Query: 1332 PDP 1334
P
Sbjct: 118 PSS 120
Score = 104 bits (262), Expect = 2e-26
Identities = 28/120 (23%), Positives = 43/120 (35%), Gaps = 6/120 (5%)
Query: 358 GMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKH 417
G P P P ++ V ++W P +GG IQ + ++
Sbjct: 1 GSSGSSG---SQPDHGRLSPPEAPDRPTISTASETSVYVTW-IPRGNGGFPIQSFRVEYK 56
Query: 418 EV-GSDAWQRVNVAICAPS-QINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDP 475
++ W AI + I L +G Y+FRV A N G S PS+ S +
Sbjct: 57 KLKKVGDWILATSAIPPSRLSVEITGLEKGISYKFRVRALNMLGESEPSAPSRPYVVSGS 116
Score = 104 bits (262), Expect = 2e-26
Identities = 28/120 (23%), Positives = 43/120 (35%), Gaps = 6/120 (5%)
Query: 1965 GMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKH 2024
G P P P ++ V ++W P +GG IQ + ++
Sbjct: 1 GSSGSSG---SQPDHGRLSPPEAPDRPTISTASETSVYVTW-IPRGNGGFPIQSFRVEYK 56
Query: 2025 EV-GSDAWQRVNVAICAPS-QINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDP 2082
++ W AI + I L +G Y+FRV A N G S PS+ S +
Sbjct: 57 KLKKVGDWILATSAIPPSRLSVEITGLEKGISYKFRVRALNMLGESEPSAPSRPYVVSGS 116
Score = 100 bits (252), Expect = 6e-25
Identities = 35/146 (23%), Positives = 51/146 (34%), Gaps = 35/146 (23%)
Query: 991 DPIKAKHPFDVPGAPGAPKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKR-LISDDKWI 1049
P AP P ++E S+ + W PR +GG PIQ + VE + L WI
Sbjct: 7 GSQPDHGRLSPPEAPDRPTISTASETSVYVTW-IPRGNGGFPIQSFRVEYKKLKKVGDWI 65
Query: 1050 KASMAHIPDTSLKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVC 1109
A+ IP + L +T L + Y+FRV
Sbjct: 66 LATS-AIPPSRLSVE------------------------------ITGLEKGISYKFRVR 94
Query: 1110 AVNAAGQGPWSSSSDIIMCCAPPCAP 1135
A+N G+ S+ S + P
Sbjct: 95 ALNMLGESEPSAPSRPYV--VSGSGP 118
Score = 98.6 bits (246), Expect = 3e-24
Identities = 28/123 (22%), Positives = 44/123 (35%), Gaps = 7/123 (5%)
Query: 261 SSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDIS 320
SSGS P P +S ++ + + W P +GG + + VE + +
Sbjct: 2 SSGSSGSQPDHGRLSPPEAP-DRPTISTASETSVYVTWIPR-GNGGFPIQSFRVEYKKLK 59
Query: 321 MP-HWICISTT--CHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDK 377
WI ++ + + GL +G Y F V A+N G P P
Sbjct: 60 KVGDWILATSAIPPSRLSVEITGLEKGISYKFRVRALNMLGESEPSAPSRPYVVSGS--G 117
Query: 378 PSP 380
PS
Sbjct: 118 PSS 120
Score = 98.6 bits (246), Expect = 3e-24
Identities = 28/123 (22%), Positives = 44/123 (35%), Gaps = 7/123 (5%)
Query: 1868 SSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDIS 1927
SSGS P P +S ++ + + W P +GG + + VE + +
Sbjct: 2 SSGSSGSQPDHGRLSPPEAP-DRPTISTASETSVYVTWIPR-GNGGFPIQSFRVEYKKLK 59
Query: 1928 MP-HWICISTT--CHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDK 1984
WI ++ + + GL +G Y F V A+N G P P
Sbjct: 60 KVGDWILATSAIPPSRLSVEITGLEKGISYKFRVRALNMLGESEPSAPSRPYVVSGS--G 117
Query: 1985 PSP 1987
PS
Sbjct: 118 PSS 120
Score = 95.1 bits (237), Expect = 5e-23
Identities = 28/117 (23%), Positives = 43/117 (36%), Gaps = 4/117 (3%)
Query: 890 DEMVLIFEVLDRPHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNST-VW 948
L P P+ + S+ + W P + GG I ++ VE K W
Sbjct: 6 SGSQPDHGRLSPPEAPDRPTISTASETSVYVTWIPRGN-GGFPIQSFRVEYKKLKKVGDW 64
Query: 949 TKVSSYV--TTPFVRVRNLAIGSTYEFRVMAENQYGLSKPALTIDPIKAKHPFDVPG 1003
+S + + V + L G +Y+FRV A N G S+P+ P G
Sbjct: 65 ILATSAIPPSRLSVEITGLEKGISYKFRVRALNMLGESEPSAPSRPYVVSGSGPSSG 121
Score = 77.8 bits (192), Expect = 8e-17
Identities = 27/132 (20%), Positives = 45/132 (34%), Gaps = 46/132 (34%)
Query: 1559 VDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEG 1618
++E S+ + W PR +GG PIQ + VE + +
Sbjct: 27 STASETSVYVTW-IPRGNGGFPIQSFRVEYKKLKKVGD---------------------- 63
Query: 1619 KSIGSERGSTAQFLEREVGGAIWLKCNDY-NVLECSFSVLNLVEGNDYEFRIIAVNAIGK 1677
W+ S + L +G Y+FR+ A+N +G+
Sbjct: 64 ----------------------WILATSAIPPSRLSVEITGLEKGISYKFRVRALNMLGE 101
Query: 1678 SEPSICTTPVKI 1689
SEPS + P +
Sbjct: 102 SEPSAPSRPYVV 113
Score = 66.2 bits (162), Expect = 7e-13
Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Query: 22 YIIERREVGG-AIWLKCNDY-NVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPSICTTP 79
+ +E +++ W+ S + L +G Y+FR+ A+N +G+SEPS + P
Sbjct: 51 FRVEYKKLKKVGDWILATSAIPPSRLSVEITGLEKGISYKFRVRALNMLGESEPSAPSRP 110
Query: 80 VKI 82
+
Sbjct: 111 YVV 113
Score = 55.4 bits (134), Expect = 4e-09
Identities = 23/127 (18%), Positives = 38/127 (29%), Gaps = 29/127 (22%)
Query: 1312 GVSEPLELDNSITAKFPFTVPDPPGQPQIVDWDTNNATLMWDRPRTDGGSKIQGYKMLLK 1371
G S S + P+ P +P I + + W PR +GG IQ +++ K
Sbjct: 1 GSSGS---SGSQPDHGRLSPPEAPDRPTISTASETSVYVTW-IPRGNGGFPIQSFRVEYK 56
Query: 1372 TPTGELPTTIWSKIRPTSSTVYCKDTTMNSSN-------------------SEPGKQSGP 1412
W +S + ++ + SEP S P
Sbjct: 57 KLKK---VGDWILA---TSAIPPSRLSVEITGLEKGISYKFRVRALNMLGESEPSAPSRP 110
Query: 1413 VIVEEQP 1419
+V
Sbjct: 111 YVVSGSG 117
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1,
isoform 2; hydrolase, immunoglobulin domain, nucleus,
protease; 2.80A {Homo sapiens}
Length = 218
Score = 115 bits (289), Expect = 8e-29
Identities = 43/225 (19%), Positives = 73/225 (32%), Gaps = 32/225 (14%)
Query: 464 SSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITP 523
S+ + + + +I V + + + C TG P W K ++EI
Sbjct: 2 GSSHHHHHHSSGLVPRGSKITVNPESKAVLAGQFVKLCCRATGHPFVQYQWFKMNKEIP- 60
Query: 524 SARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNK-GGVKSTKAELIIMTAPKF------ 576
G+T LI N+V+ DA YVCR N S ++L + P+
Sbjct: 61 --------NGNTSELIFNAVHVKDAGFYVCRVNNNFTFEFSQWSQLDVCDIPESFQRSVD 112
Query: 577 ---NVPPRFRDT---AYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSER 630
+ G +V++ G P P W+++ + T E
Sbjct: 113 GVSESKLQICVEPTSQKLMPGSTLVLQCVAVGSPIPHYQWFKNELPL---------THET 163
Query: 631 HAILTIRDASNVDTAPYRVVAENDLG-MDSAIVKIQISDRPDPPQ 674
+ + Y ND DS V+I I + +
Sbjct: 164 KKLYMVPYVDLEHQGTYWCHVYNDRDSQDSKKVEIIIDELNNLGH 208
Score = 108 bits (271), Expect = 2e-26
Identities = 37/219 (16%), Positives = 63/219 (28%), Gaps = 34/219 (15%)
Query: 89 EKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRL 148
V + V G+ + L C ATG P + +W + +EI +G L
Sbjct: 17 RGSKITVNPESKAVLAGQFVKLCCRATGHPFVQYQWFKMNKEIPNGNTS---------EL 67
Query: 149 HFNEVTDVDNGDYTCEAYNSVGFAHTSS----------------RVKIGTPPRIDRMPNA 192
FN V D G Y C N+ F + + +I P +
Sbjct: 68 IFNAVHVKDAGFYVCRVNNNFTFEFSQWSQLDVCDIPESFQRSVDGVSESKLQICVEPTS 127
Query: 193 LYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAG 252
+ G ++ G KN + + + + + + E G
Sbjct: 128 QKLMPGSTLVLQCVAVGSPIPHYQWFKNELPLTHETKKLYM---------VPYVDLEHQG 178
Query: 253 DYTVNLSNSSGSVSGTFTINITGLPGPPIGPLDVSEITK 291
Y ++ N S I P + + T
Sbjct: 179 TYWCHVYNDRDSQDSKKVEIIIDELNNLGHPDNKEQTTD 217
Score = 108 bits (271), Expect = 2e-26
Identities = 37/219 (16%), Positives = 63/219 (28%), Gaps = 34/219 (15%)
Query: 1696 EKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRL 1755
V + V G+ + L C ATG P + +W + +EI +G L
Sbjct: 17 RGSKITVNPESKAVLAGQFVKLCCRATGHPFVQYQWFKMNKEIPNGNTS---------EL 67
Query: 1756 HFNEVTDVDNGDYTCEAYNSVGFAHTSS----------------RVKIGTPPRIDRMPNA 1799
FN V D G Y C N+ F + + +I P +
Sbjct: 68 IFNAVHVKDAGFYVCRVNNNFTFEFSQWSQLDVCDIPESFQRSVDGVSESKLQICVEPTS 127
Query: 1800 LYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAG 1859
+ G ++ G KN + + + + + + E G
Sbjct: 128 QKLMPGSTLVLQCVAVGSPIPHYQWFKNELPLTHETKKLYM---------VPYVDLEHQG 178
Query: 1860 DYTVNLSNSSGSVSGTFTINITGLPGPPIGPLDVSEITK 1898
Y ++ N S I P + + T
Sbjct: 179 TYWCHVYNDRDSQDSKKVEIIIDELNNLGHPDNKEQTTD 217
Score = 83.4 bits (206), Expect = 1e-17
Identities = 22/109 (20%), Positives = 34/109 (31%), Gaps = 10/109 (9%)
Query: 84 EFVGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAG 143
+ V K V + G L LQC A G+P+P +W +N ++ +
Sbjct: 112 DGVSESKLQICVEPTSQKLMPGSTLVLQCVAVGSPIPHYQWFKNELPLTHETKK------ 165
Query: 144 GVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSS-RVKIGTPPRIDRMPN 191
V G Y C YN + + I + N
Sbjct: 166 ---LYMVPYVDLEHQGTYWCHVYNDRDSQDSKKVEIIIDELNNLGHPDN 211
Score = 83.4 bits (206), Expect = 1e-17
Identities = 22/109 (20%), Positives = 34/109 (31%), Gaps = 10/109 (9%)
Query: 1691 EFVGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAG 1750
+ V K V + G L LQC A G+P+P +W +N ++ +
Sbjct: 112 DGVSESKLQICVEPTSQKLMPGSTLVLQCVAVGSPIPHYQWFKNELPLTHETKK------ 165
Query: 1751 GVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSS-RVKIGTPPRIDRMPN 1798
V G Y C YN + + I + N
Sbjct: 166 ---LYMVPYVDLEHQGTYWCHVYNDRDSQDSKKVEIIIDELNNLGHPDN 211
Score = 81.9 bits (202), Expect = 3e-17
Identities = 23/136 (16%), Positives = 34/136 (25%), Gaps = 18/136 (13%)
Query: 454 AQNEAGLSLPSSASNSVQ--------IKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTIT 505
N + V D ++ +I V + + QC
Sbjct: 84 VNNNFTFEFSQWSQLDVCDIPESFQRSVDGVSESKLQICVEPTSQKLMPGSTLVLQCVAV 143
Query: 506 GCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNK-GGVKST 564
G P P W K +T + ++ V Y C N S
Sbjct: 144 GSPIPHYQWFKNELPLTHETKK---------LYMVPYVDLEHQGTYWCHVYNDRDSQDSK 194
Query: 565 KAELIIMTAPKFNVPP 580
K E+II P
Sbjct: 195 KVEIIIDELNNLGHPD 210
Score = 81.9 bits (202), Expect = 3e-17
Identities = 23/136 (16%), Positives = 34/136 (25%), Gaps = 18/136 (13%)
Query: 2061 AQNEAGLSLPSSASNSVQ--------IKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTIT 2112
N + V D ++ +I V + + QC
Sbjct: 84 VNNNFTFEFSQWSQLDVCDIPESFQRSVDGVSESKLQICVEPTSQKLMPGSTLVLQCVAV 143
Query: 2113 GCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNK-GGVKST 2171
G P P W K +T + ++ V Y C N S
Sbjct: 144 GSPIPHYQWFKNELPLTHETKK---------LYMVPYVDLEHQGTYWCHVYNDRDSQDSK 194
Query: 2172 KAELIIMTAPKFNVPP 2187
K E+II P
Sbjct: 195 KVEIIIDELNNLGHPD 210
Score = 74.5 bits (183), Expect = 9e-15
Identities = 27/114 (23%), Positives = 44/114 (38%), Gaps = 10/114 (8%)
Query: 2071 SSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITP 2130
S+ + + + +I V + + + C TG P W K ++EI
Sbjct: 2 GSSHHHHHHSSGLVPRGSKITVNPESKAVLAGQFVKLCCRATGHPFVQYQWFKMNKEIP- 60
Query: 2131 SARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNK-GGVKSTKAELIIMTAPKF 2183
G+T LI N+V+ DA YVCR N S ++L + P+
Sbjct: 61 --------NGNTSELIFNAVHVKDAGFYVCRVNNNFTFEFSQWSQLDVCDIPES 106
Score = 51.0 bits (122), Expect = 1e-06
Identities = 15/117 (12%), Positives = 35/117 (29%), Gaps = 12/117 (10%)
Query: 1130 APPCAPKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSE 1189
+I + + ++ G + G P P W N ++ + +
Sbjct: 114 VSESKLQICVEPT--SQKLMPGSTLVLQCVAVGSPIPHYQWFKNELPLTHETK------- 164
Query: 1190 NQTIYRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYVVDKPSPPQGPLDVSDITPE 1246
+Y G+Y + N S + ++D+ + P + T +
Sbjct: 165 --KLYMVPYVDLE-HQGTYWCHVYNDRDSQDSKKVEIIIDELNNLGHPDNKEQTTDQ 218
Score = 49.5 bits (118), Expect = 3e-06
Identities = 22/116 (18%), Positives = 37/116 (31%), Gaps = 13/116 (11%)
Query: 1131 PPCAPKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSEN 1190
P KIT + VLAG+ + +G P W E+ + +
Sbjct: 15 VPRGSKITVNPE--SKAVLAGQFVKLCCRATGHPFVQYQWFKMNKEIPNGNTSELIFNAV 72
Query: 1191 QTIYRNKSAKRATDSGSYTIQLVNTVGSD-SASCKVYVVDKPSPPQGPLDVSDITP 1245
D+G Y ++ N + S ++ V D P Q +D +
Sbjct: 73 HV----------KDAGFYVCRVNNNFTFEFSQWSQLDVCDIPESFQRSVDGVSESK 118
Score = 48.0 bits (114), Expect = 1e-05
Identities = 18/131 (13%), Positives = 42/131 (32%), Gaps = 10/131 (7%)
Query: 168 SVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSD 227
S H S + +I P + + G K+ G ++ K + + +
Sbjct: 3 SSHHHHHHSSGLVPRGSKITVNPESKAVLAGQFVKLCCRATGHPFVQYQWFKMNKEIPNG 62
Query: 228 DRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGS-VSGTFTINITGLPGPPIGPLDV 286
+ + + +DAG Y ++N+ S +++ +P +D
Sbjct: 63 NTSELI---------FNAVHVKDAGFYVCRVNNNFTFEFSQWSQLDVCDIPESFQRSVDG 113
Query: 287 SEITKHTCTLH 297
+K +
Sbjct: 114 VSESKLQICVE 124
Score = 48.0 bits (114), Expect = 1e-05
Identities = 18/131 (13%), Positives = 42/131 (32%), Gaps = 10/131 (7%)
Query: 1775 SVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSD 1834
S H S + +I P + + G K+ G ++ K + + +
Sbjct: 3 SSHHHHHHSSGLVPRGSKITVNPESKAVLAGQFVKLCCRATGHPFVQYQWFKMNKEIPNG 62
Query: 1835 DRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGS-VSGTFTINITGLPGPPIGPLDV 1893
+ + + +DAG Y ++N+ S +++ +P +D
Sbjct: 63 NTSELI---------FNAVHVKDAGFYVCRVNNNFTFEFSQWSQLDVCDIPESFQRSVDG 113
Query: 1894 SEITKHTCTLH 1904
+K +
Sbjct: 114 VSESKLQICVE 124
Score = 40.3 bits (94), Expect = 0.004
Identities = 24/147 (16%), Positives = 41/147 (27%), Gaps = 29/147 (19%)
Query: 1401 SSNSEPGKQSGPVIVEEQPNKPVMDLSGVRDITVKAGEDFSIHVPFMAFPQPAAFWFAND 1460
+S G I P V AG+ + P WF +
Sbjct: 8 HHHSSGLVPRGSKITV-NP----------ESKAVLAGQFVKLCCRATGHPFVQYQWFKMN 56
Query: 1461 SIIDDSDTRVHKQLTMNSASLVVKNSQRSDGGQYRLQLKNPAGF---DTATLHSRLRTLP 1517
I + N++ L+ D G Y ++ N F + L + +P
Sbjct: 57 KEIPNG----------NTSELIFNAVHVKDAGFYVCRVNNNFTFEFSQWSQL--DVCDIP 104
Query: 1518 DSVNPRCHLPSSTSKERPKFPTHPNHQ 1544
+S S+ + + P Q
Sbjct: 105 ESFQR---SVDGVSESKLQICVEPTSQ 128
Score = 37.6 bits (87), Expect = 0.026
Identities = 10/79 (12%), Positives = 20/79 (25%), Gaps = 10/79 (12%)
Query: 1430 RDITVKAGEDFSIHVPFMAFPQPAAFWFANDSIIDDSDTRVHKQLTMNSASLVVKNSQRS 1489
+ G + + P P WF N+ + ++ +V
Sbjct: 126 TSQKLMPGSTLVLQCVAVGSPIPHYQWFKNELPLTHETKKL----------YMVPYVDLE 175
Query: 1490 DGGQYRLQLKNPAGFDTAT 1508
G Y + N +
Sbjct: 176 HQGTYWCHVYNDRDSQDSK 194
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation,
phosphorylation, disease MU neuronal development,
immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens}
PDB: 2v9q_A
Length = 212
Score = 114 bits (288), Expect = 9e-29
Identities = 50/209 (23%), Positives = 73/209 (34%), Gaps = 17/209 (8%)
Query: 480 APEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREIT-----PSARHHIFAEGD 534
P I+ + + A C G P PTI W KG + P + + G
Sbjct: 9 PPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGS 68
Query: 535 TYTLIINSVYGVDADE--YVCRAVNKGG-VKSTKAELIIMT-APKFNVPPRFRDTAYFDK 590
+ L I DE YVC A N G S A L + F P
Sbjct: 69 LFFLRIVHGRKSRPDEGVYVCVARNYLGEAVSHDASLEVAILRDDFRQNPS---DVMVAV 125
Query: 591 GENVVVK-IPFTGYPKPKITWYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAPYRV 649
GE V++ P G+P+P I+W +D ++ T L I D Y
Sbjct: 126 GEPAVMECQPPRGHPEPTISWKKDGSPLDDKDERI--TIRGGK-LMITYTRKSDAGKYVC 182
Query: 650 VAENDLGMD-SAIVKIQISDRPDPPQFPT 677
V N +G S + ++ + +RP +
Sbjct: 183 VGTNMVGERESEVAELTVLERPSFVKAAA 211
Score = 105 bits (263), Expect = 2e-25
Identities = 42/186 (22%), Positives = 73/186 (39%), Gaps = 13/186 (6%)
Query: 90 KPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGA-----RYRVETAGG 144
P + DL+V G+ TL C+A G P P W + G + + + +G
Sbjct: 9 PPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGS 68
Query: 145 VF--RLHFNEVTDVDNGDYTCEAYNSVGFAHTSS-RVKIGT-PPRIDRMPNALYIPEGDN 200
+F R+ + D G Y C A N +G A + +++ + P+ + + G+
Sbjct: 69 LFFLRIVHGRKSRPDEGVYVCVARNYLGEAVSHDASLEVAILRDDFRQNPSDVMVAVGEP 128
Query: 201 TKVK-IFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLS 259
++ G +S K+G + D T+ ++ I RK DAG Y +
Sbjct: 129 AVMECQPPRGHPEPTISWKKDGSPLDDKDER-ITIRGGKLM--ITYTRKSDAGKYVCVGT 185
Query: 260 NSSGSV 265
N G
Sbjct: 186 NMVGER 191
Score = 105 bits (263), Expect = 2e-25
Identities = 42/186 (22%), Positives = 73/186 (39%), Gaps = 13/186 (6%)
Query: 1697 KPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGA-----RYRVETAGG 1751
P + DL+V G+ TL C+A G P P W + G + + + +G
Sbjct: 9 PPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGS 68
Query: 1752 VF--RLHFNEVTDVDNGDYTCEAYNSVGFAHTSS-RVKIGT-PPRIDRMPNALYIPEGDN 1807
+F R+ + D G Y C A N +G A + +++ + P+ + + G+
Sbjct: 69 LFFLRIVHGRKSRPDEGVYVCVARNYLGEAVSHDASLEVAILRDDFRQNPSDVMVAVGEP 128
Query: 1808 TKVK-IFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLS 1866
++ G +S K+G + D T+ ++ I RK DAG Y +
Sbjct: 129 AVMECQPPRGHPEPTISWKKDGSPLDDKDER-ITIRGGKLM--ITYTRKSDAGKYVCVGT 185
Query: 1867 NSSGSV 1872
N G
Sbjct: 186 NMVGER 191
Score = 91.0 bits (226), Expect = 2e-20
Identities = 32/129 (24%), Positives = 48/129 (37%), Gaps = 11/129 (8%)
Query: 454 AQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTIT-GCPKPTI 512
A+N G ++ S S+++ A + + A +C G P+PTI
Sbjct: 91 ARNYLGEAV--SHDASLEV----AILRDDFRQNPSDVMVAVGEPAVMECQPPRGHPEPTI 144
Query: 513 SWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGG-VKSTKAELIIM 571
SW K + G L+I DA +YVC N G +S AEL ++
Sbjct: 145 SWKKDGSPLDDKDERITIRGG---KLMITYTRKSDAGKYVCVGTNMVGERESEVAELTVL 201
Query: 572 TAPKFNVPP 580
P F
Sbjct: 202 ERPSFVKAA 210
Score = 91.0 bits (226), Expect = 2e-20
Identities = 32/129 (24%), Positives = 48/129 (37%), Gaps = 11/129 (8%)
Query: 2061 AQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTIT-GCPKPTI 2119
A+N G ++ S S+++ A + + A +C G P+PTI
Sbjct: 91 ARNYLGEAV--SHDASLEV----AILRDDFRQNPSDVMVAVGEPAVMECQPPRGHPEPTI 144
Query: 2120 SWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGG-VKSTKAELIIM 2178
SW K + G L+I DA +YVC N G +S AEL ++
Sbjct: 145 SWKKDGSPLDDKDERITIRGG---KLMITYTRKSDAGKYVCVGTNMVGERESEVAELTVL 201
Query: 2179 TAPKFNVPP 2187
P F
Sbjct: 202 ERPSFVKAA 210
Score = 84.9 bits (210), Expect = 3e-18
Identities = 22/107 (20%), Positives = 37/107 (34%), Gaps = 5/107 (4%)
Query: 86 VGGEKPDFIVPLKDLVVPLGKLLTLQCEAT-GTPVPKCRWLRNGREISSGARYRVETAGG 144
V + DF D++V +G+ ++C+ G P P W ++G + G
Sbjct: 107 VAILRDDFRQNPSDVMVAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDKDERITIRGGK 166
Query: 145 VFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSS-RVKIGTPPRIDRMP 190
L D G Y C N VG + + + P +
Sbjct: 167 ---LMITYTRKSDAGKYVCVGTNMVGERESEVAELTVLERPSFVKAA 210
Score = 84.9 bits (210), Expect = 3e-18
Identities = 22/107 (20%), Positives = 37/107 (34%), Gaps = 5/107 (4%)
Query: 1693 VGGEKPDFIVPLKDLVVPLGKLLTLQCEAT-GTPVPKCRWLRNGREISSGARYRVETAGG 1751
V + DF D++V +G+ ++C+ G P P W ++G + G
Sbjct: 107 VAILRDDFRQNPSDVMVAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDKDERITIRGGK 166
Query: 1752 VFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSS-RVKIGTPPRIDRMP 1797
L D G Y C N VG + + + P +
Sbjct: 167 ---LMITYTRKSDAGKYVCVGTNMVGERESEVAELTVLERPSFVKAA 210
Score = 72.5 bits (178), Expect = 4e-14
Identities = 32/127 (25%), Positives = 42/127 (33%), Gaps = 11/127 (8%)
Query: 2087 APEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREIT-----PSARHHIFAEGD 2141
P I+ + + A C G P PTI W KG + P + + G
Sbjct: 9 PPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGS 68
Query: 2142 TYTLIINSVYGVDADE--YVCRAVNKGG-VKSTKAELIIMT-APKFNVPPRFRDTAYFES 2197
+ L I DE YVC A N G S A L + F P D
Sbjct: 69 LFFLRIVHGRKSRPDEGVYVCVARNYLGEAVSHDASLEVAILRDDFRQNP--SDVMVAVG 126
Query: 2198 DVVVVVC 2204
+ V+ C
Sbjct: 127 EPAVMEC 133
Score = 55.6 bits (134), Expect = 3e-08
Identities = 36/180 (20%), Positives = 61/180 (33%), Gaps = 16/180 (8%)
Query: 1064 VLWVSEGKSIGSERGSTAQFLELL----LMFIPNRVTSLIENHEYEFRVCAVNAAGQGPW 1119
+ W G+ + +++ LL L F+ E + A N G+
Sbjct: 41 IEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGVYVCVARNYLGE--- 97
Query: 1120 SSSSDIIMCCAPPCAPKITSDLSIRDMTVLAGEEFTIT-VPFSGRPKPTPIWTVNGDEVS 1178
+ S D + A + D+ V GE + P G P+PT W +G +
Sbjct: 98 AVSHDASLEVAIL-RDDFRQNP--SDVMVAVGEPAVMECQPPRGHPEPTISWKKDGSPLD 154
Query: 1179 PDGRIKFETSENQTIYRNKSAKRATDSGSYTIQLVNTVGSD-SASCKVYVVDKPSPPQGP 1237
I R +D+G Y N VG S ++ V+++PS +
Sbjct: 155 DKDERITIRGGKLMITY----TRKSDAGKYVCVGTNMVGERESEVAELTVLERPSFVKAA 210
Score = 50.2 bits (120), Expect = 1e-06
Identities = 29/115 (25%), Positives = 44/115 (38%), Gaps = 22/115 (19%)
Query: 1430 RDITVKAGEDFSIH-VPFMAFPQPAAFWFANDSIIDDSDTRVHKQLTMNSASLVVKNSQR 1488
D+ V GE + P P+P W + S +DD D R+ T+ L++ +++
Sbjct: 119 SDVMVAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDKDERI----TIRGGKLMITYTRK 174
Query: 1489 SDGGQYRLQLKNPAGFDTATLHSRLRTLPDSVNPRCHLPSSTSKERPKFPTHPNH 1543
SD G+Y N G S + L +V ERP F H
Sbjct: 175 SDAGKYVCVGTNMVG----ERESEVAEL--TV-----------LERPSFVKAAAH 212
Score = 45.2 bits (107), Expect = 7e-05
Identities = 28/117 (23%), Positives = 38/117 (32%), Gaps = 12/117 (10%)
Query: 1134 APKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDG------RIKFET 1187
P+I D+ V GE T+ GRP PT W G+ V D R+ +
Sbjct: 9 PPRIVE--HPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPS 66
Query: 1188 SENQTIYRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYVVDKPSPP---QGPLDVS 1241
+ K D G Y N +G + S + Q P DV
Sbjct: 67 GSLFFLRIVHGRKSRPDEGVYVCVARNYLGE-AVSHDASLEVAILRDDFRQNPSDVM 122
Score = 32.9 bits (75), Expect = 0.88
Identities = 19/80 (23%), Positives = 30/80 (37%), Gaps = 6/80 (7%)
Query: 1430 RDITVKAGEDFSIHVPFMAFPQPAAFWFANDSII--DDSDTRVHKQLTMNSA----SLVV 1483
D+ V GE +++ P P W+ + D D R H+ L + + +V
Sbjct: 17 SDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVH 76
Query: 1484 KNSQRSDGGQYRLQLKNPAG 1503
R D G Y +N G
Sbjct: 77 GRKSRPDEGVYVCVARNYLG 96
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle
isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo
sapiens} SCOP: b.1.1.4
Length = 114
Score = 110 bits (277), Expect = 2e-28
Identities = 31/104 (29%), Positives = 45/104 (43%), Gaps = 3/104 (2%)
Query: 1134 APKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQTI 1193
P+I D V AGE + +G T W ++ +K E SEN +
Sbjct: 7 GPQIIQFP--EDQKVRAGESVELFGKVTGTQPITCTWMKFRKQIQESEHMKVENSENGSK 64
Query: 1194 YRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYVVDKPSPPQGP 1237
+A++ G YT+ + N +GS A + VVDKP PP G
Sbjct: 65 LTILAARQE-HCGCYTLLVENKLGSRQAQVNLTVVDKPDPPAGT 107
Score = 106 bits (266), Expect = 5e-27
Identities = 31/105 (29%), Positives = 44/105 (41%), Gaps = 3/105 (2%)
Query: 572 TAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSERH 631
+ P+ P GE+V + TG TW + + I+ H VE SE
Sbjct: 6 SGPQIIQFPE---DQKVRAGESVELFGKVTGTQPITCTWMKFRKQIQESEHMKVENSENG 62
Query: 632 AILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQISDRPDPPQFP 676
+ LTI A Y ++ EN LG A V + + D+PDPP
Sbjct: 63 SKLTILAARQEHCGCYTLLVENKLGSRQAQVNLTVVDKPDPPAGT 107
Score = 97.8 bits (244), Expect = 6e-24
Identities = 22/99 (22%), Positives = 36/99 (36%)
Query: 87 GGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVF 146
G P I +D V G+ + L + TGT C W++ ++I +VE +
Sbjct: 4 GSSGPQIIQFPEDQKVRAGESVELFGKVTGTQPITCTWMKFRKQIQESEHMKVENSENGS 63
Query: 147 RLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPR 185
+L G YT N +G + + P
Sbjct: 64 KLTILAARQEHCGCYTLLVENKLGSRQAQVNLTVVDKPD 102
Score = 97.8 bits (244), Expect = 6e-24
Identities = 22/99 (22%), Positives = 36/99 (36%)
Query: 1694 GGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVF 1753
G P I +D V G+ + L + TGT C W++ ++I +VE +
Sbjct: 4 GSSGPQIIQFPEDQKVRAGESVELFGKVTGTQPITCTWMKFRKQIQESEHMKVENSENGS 63
Query: 1754 RLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPR 1792
+L G YT N +G + + P
Sbjct: 64 KLTILAARQEHCGCYTLLVENKLGSRQAQVNLTVVDKPD 102
Score = 97.4 bits (243), Expect = 7e-24
Identities = 20/107 (18%), Positives = 37/107 (34%), Gaps = 3/107 (2%)
Query: 480 APEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLI 539
P+II + + + +TG T +W+K ++I S + + L
Sbjct: 7 GPQIIQFPEDQKVRAGESVELFGKVTGTQPITCTWMKFRKQIQESEHMKVENSENGSKLT 66
Query: 540 INSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPRFRDTA 586
I + Y NK G + + L ++ P PP +
Sbjct: 67 ILAARQEHCGCYTLLVENKLGSRQAQVNLTVVDKPD---PPAGTPSG 110
Score = 97.4 bits (243), Expect = 7e-24
Identities = 20/107 (18%), Positives = 37/107 (34%), Gaps = 3/107 (2%)
Query: 2087 APEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLI 2146
P+II + + + +TG T +W+K ++I S + + L
Sbjct: 7 GPQIIQFPEDQKVRAGESVELFGKVTGTQPITCTWMKFRKQIQESEHMKVENSENGSKLT 66
Query: 2147 INSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPRFRDTA 2193
I + Y NK G + + L ++ P PP +
Sbjct: 67 ILAARQEHCGCYTLLVENKLGSRQAQVNLTVVDKPD---PPAGTPSG 110
Score = 88.5 bits (220), Expect = 1e-20
Identities = 23/102 (22%), Positives = 44/102 (43%)
Query: 182 TPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIII 241
+ P+I + P + G++ ++ G QP+ + K + +Q + K ++ +
Sbjct: 6 SGPQIIQFPEDQKVRAGESVELFGKVTGTQPITCTWMKFRKQIQESEHMKVENSENGSKL 65
Query: 242 FIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPIGP 283
I R+E G YT+ + N GS + + P PP G
Sbjct: 66 TILAARQEHCGCYTLLVENKLGSRQAQVNLTVVDKPDPPAGT 107
Score = 88.5 bits (220), Expect = 1e-20
Identities = 23/102 (22%), Positives = 44/102 (43%)
Query: 1789 TPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIII 1848
+ P+I + P + G++ ++ G QP+ + K + +Q + K ++ +
Sbjct: 6 SGPQIIQFPEDQKVRAGESVELFGKVTGTQPITCTWMKFRKQIQESEHMKVENSENGSKL 65
Query: 1849 FIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPIGP 1890
I R+E G YT+ + N GS + + P PP G
Sbjct: 66 TILAARQEHCGCYTLLVENKLGSRQAQVNLTVVDKPDPPAGT 107
Score = 70.4 bits (173), Expect = 2e-14
Identities = 16/81 (19%), Positives = 32/81 (39%), Gaps = 1/81 (1%)
Query: 1430 RDITVKAGEDFSIHVPFMAFPQPAAFWFANDSIIDDSDTRVHKQLTMNSASLVVKNSQRS 1489
D V+AGE + W I +S+ + + + N + L + +++
Sbjct: 15 EDQKVRAGESVELFGKVTGTQPITCTWMKFRKQIQESE-HMKVENSENGSKLTILAARQE 73
Query: 1490 DGGQYRLQLKNPAGFDTATLH 1510
G Y L ++N G A ++
Sbjct: 74 HCGCYTLLVENKLGSRQAQVN 94
>2dju_A Receptor-type tyrosine-protein phosphatase F; LAR protein,
leukocyte antigen related, structural genomics, NPPSFA;
NMR {Homo sapiens}
Length = 106
Score = 109 bits (274), Expect = 4e-28
Identities = 29/100 (29%), Positives = 40/100 (40%), Gaps = 4/100 (4%)
Query: 667 SDRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSWIR-VGNTRFT 725
S P PP V + S+ L W + +T Y ++ R + V T
Sbjct: 5 SSGPKPPIDLVVTETTATSVTLTWDSG---NSEPVTYYGIQYRAAGTEGPFQEVDGVATT 61
Query: 726 TMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKDT 765
+I GLSP +Y FRV A N GR PS T + +
Sbjct: 62 RYSIGGLSPFSEYAFRVLAVNSIGRGPPSEAVRARTGEQS 101
Score = 97.8 bits (244), Expect = 5e-24
Identities = 27/109 (24%), Positives = 42/109 (38%), Gaps = 9/109 (8%)
Query: 1229 DKPSPPQGPLDVSDITPESCSLSWKPPLDDGGSPITNYVVEKYESATGFWSKLSSFVRSP 1288
P PP + V++ T S +L+W P+T Y ++ + T + V +
Sbjct: 6 SGPKPPIDLV-VTETTATSVTLTWDSG---NSEPVTYYGIQYRAAGTEGPFQEVDGVATT 61
Query: 1289 AYDVFGLETNRQYRFRVRAENQYGVSEPLELDNSITAKFPFTVPDPPGQ 1337
Y + GL +Y FRV A N G P E + T + P
Sbjct: 62 RYSIGGLSPFSEYAFRVLAVNSIGRGPPSEAVRARTGE-----QSGPSS 105
Score = 96.6 bits (241), Expect = 1e-23
Identities = 23/97 (23%), Positives = 37/97 (38%), Gaps = 3/97 (3%)
Query: 900 DRPHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTKVSSYVTTPF 959
P PP +L E S+TL W +T Y ++ + + + V T
Sbjct: 6 SGPKPPIDLVVTETTATSVTLTWDSG---NSEPVTYYGIQYRAAGTEGPFQEVDGVATTR 62
Query: 960 VRVRNLAIGSTYEFRVMAENQYGLSKPALTIDPIKAK 996
+ L+ S Y FRV+A N G P+ + +
Sbjct: 63 YSIGGLSPFSEYAFRVLAVNSIGRGPPSEAVRARTGE 99
Score = 93.9 bits (234), Expect = 1e-22
Identities = 31/108 (28%), Positives = 44/108 (40%), Gaps = 9/108 (8%)
Query: 274 TGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHD 333
+ P PP L V+E T + TL W+ VT+Y ++ R
Sbjct: 5 SSGPKPP-IDLVVTETTATSVTLTWDSG---NSEPVTYYGIQYRAAGTEGPFQEVDGVAT 60
Query: 334 TTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPP 381
T + + GL+ EY F V+AVN G GPP E + + S P
Sbjct: 61 TRYSIGGLSPFSEYAFRVLAVNSIGRGPPSEAVRARTG-----EQSGP 103
Score = 93.9 bits (234), Expect = 1e-22
Identities = 31/108 (28%), Positives = 44/108 (40%), Gaps = 9/108 (8%)
Query: 1881 TGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHD 1940
+ P PP L V+E T + TL W+ VT+Y ++ R
Sbjct: 5 SSGPKPP-IDLVVTETTATSVTLTWDSG---NSEPVTYYGIQYRAAGTEGPFQEVDGVAT 60
Query: 1941 TTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPP 1988
T + + GL+ EY F V+AVN G GPP E + + S P
Sbjct: 61 TRYSIGGLSPFSEYAFRVLAVNSIGRGPPSEAVRARTG-----EQSGP 103
Score = 88.1 bits (219), Expect = 1e-20
Identities = 24/136 (17%), Positives = 39/136 (28%), Gaps = 38/136 (27%)
Query: 1000 DVPGAPGAPKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDT 1059
P P ++T S++L W P+ Y ++ R + + + + T
Sbjct: 6 SGPKPPIDLVVTETTATSVTLTWDSG---NSEPVTYYGIQYRAAGTEGPFQE-VDGVATT 61
Query: 1060 SLKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPW 1119
+ L EY FRV AVN+ G+GP
Sbjct: 62 RY--------------------------------SIGGLSPFSEYAFRVLAVNSIGRGPP 89
Query: 1120 SSSSDIIMCCAPPCAP 1135
S + P
Sbjct: 90 SEAVRART--GEQSGP 103
Score = 85.8 bits (213), Expect = 7e-20
Identities = 28/104 (26%), Positives = 40/104 (38%), Gaps = 4/104 (3%)
Query: 372 KSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAI 431
S P PP VVT+ V L+WD + Y I G++ + V
Sbjct: 2 SSGSSGPKPPIDLVVTETTATSVTLTWDSG---NSEPVTYYGIQYRAAGTEGPFQ-EVDG 57
Query: 432 CAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDP 475
A ++ +I L +Y FRV A N G PS A + +
Sbjct: 58 VATTRYSIGGLSPFSEYAFRVLAVNSIGRGPPSEAVRARTGEQS 101
Score = 85.8 bits (213), Expect = 7e-20
Identities = 28/104 (26%), Positives = 40/104 (38%), Gaps = 4/104 (3%)
Query: 1979 KSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAI 2038
S P PP VVT+ V L+WD + Y I G++ + V
Sbjct: 2 SSGSSGPKPPIDLVVTETTATSVTLTWDSG---NSEPVTYYGIQYRAAGTEGPFQ-EVDG 57
Query: 2039 CAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDP 2082
A ++ +I L +Y FRV A N G PS A + +
Sbjct: 58 VATTRYSIGGLSPFSEYAFRVLAVNSIGRGPPSEAVRARTGEQS 101
Score = 69.6 bits (171), Expect = 3e-14
Identities = 20/129 (15%), Positives = 37/129 (28%), Gaps = 49/129 (37%)
Query: 1559 VDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEG 1618
++T S++L W P+ Y ++ R + +
Sbjct: 17 TETTATSVTLTWDSG---NSEPVTYYGIQYRAAGTEGPFQ-------------------- 53
Query: 1619 KSIGSERGSTAQFLEREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKS 1678
V +S+ L ++Y FR++AVN+IG+
Sbjct: 54 --------------------------EVDGVATTRYSIGGLSPFSEYAFRVLAVNSIGRG 87
Query: 1679 EPSICTTPV 1687
PS
Sbjct: 88 PPSEAVRAR 96
Score = 63.5 bits (155), Expect = 4e-12
Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Query: 22 YIIERREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPSICTTPV 80
Y I+ R G V +S+ L ++Y FR++AVN+IG+ PS
Sbjct: 39 YGIQYRAAGTEGP-FQEVDGVATTRYSIGGLSPFSEYAFRVLAVNSIGRGPPSEAVRAR 96
Score = 45.8 bits (109), Expect = 8e-06
Identities = 11/63 (17%), Positives = 21/63 (33%), Gaps = 3/63 (4%)
Query: 1330 TVPDPPGQPQIVDWDTNNATLMWDRPRTDGGSKIQGYKMLLKTPTGELPTTIWSKIRPTS 1389
+ P PP + + + TL WD + Y + + E P + T
Sbjct: 6 SGPKPPIDLVVTETTATSVTLTWDSG---NSEPVTYYGIQYRAAGTEGPFQEVDGVATTR 62
Query: 1390 STV 1392
++
Sbjct: 63 YSI 65
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain,
beta-sandwhich, I-SET, structural protein; 2.10A {Homo
sapiens} SCOP: b.1.1.4
Length = 99
Score = 108 bits (273), Expect = 5e-28
Identities = 26/95 (27%), Positives = 47/95 (49%), Gaps = 1/95 (1%)
Query: 477 AAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHI-FAEGDT 535
+ +AP+I +++ Q +A F+ + G P P W K +I S R + + E +
Sbjct: 2 SMEAPKIFERIQSQTVGQGSDAHFRVRVVGKPDPECEWYKNGVKIERSDRIYWYWPEDNV 61
Query: 536 YTLIINSVYGVDADEYVCRAVNKGGVKSTKAELII 570
L+I V G D+ + +A+N G S+ A L++
Sbjct: 62 CELVIRDVTGEDSASIMVKAINIAGETSSHAFLLV 96
Score = 108 bits (273), Expect = 5e-28
Identities = 26/95 (27%), Positives = 47/95 (49%), Gaps = 1/95 (1%)
Query: 2084 AAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHI-FAEGDT 2142
+ +AP+I +++ Q +A F+ + G P P W K +I S R + + E +
Sbjct: 2 SMEAPKIFERIQSQTVGQGSDAHFRVRVVGKPDPECEWYKNGVKIERSDRIYWYWPEDNV 61
Query: 2143 YTLIINSVYGVDADEYVCRAVNKGGVKSTKAELII 2177
L+I V G D+ + +A+N G S+ A L++
Sbjct: 62 CELVIRDVTGEDSASIMVKAINIAGETSSHAFLLV 96
Score = 97.3 bits (243), Expect = 5e-24
Identities = 21/93 (22%), Positives = 34/93 (36%), Gaps = 1/93 (1%)
Query: 89 EKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETA-GGVFR 147
E P ++ V G + G P P+C W +NG +I R V
Sbjct: 4 EAPKIFERIQSQTVGQGSDAHFRVRVVGKPDPECEWYKNGVKIERSDRIYWYWPEDNVCE 63
Query: 148 LHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKI 180
L +VT D+ +A N G + + + +
Sbjct: 64 LVIRDVTGEDSASIMVKAINIAGETSSHAFLLV 96
Score = 97.3 bits (243), Expect = 5e-24
Identities = 21/93 (22%), Positives = 34/93 (36%), Gaps = 1/93 (1%)
Query: 1696 EKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETA-GGVFR 1754
E P ++ V G + G P P+C W +NG +I R V
Sbjct: 4 EAPKIFERIQSQTVGQGSDAHFRVRVVGKPDPECEWYKNGVKIERSDRIYWYWPEDNVCE 63
Query: 1755 LHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKI 1787
L +VT D+ +A N G + + + +
Sbjct: 64 LVIRDVTGEDSASIMVKAINIAGETSSHAFLLV 96
Score = 76.2 bits (188), Expect = 2e-16
Identities = 24/100 (24%), Positives = 41/100 (41%), Gaps = 4/100 (4%)
Query: 571 MTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSER 630
M APK + + +G + ++ G P P+ WY++ IE + E
Sbjct: 3 MEAPKIFERIQSQTVG---QGSDAHFRVRVVGKPDPECEWYKNGVKIERSDRIYWYWPED 59
Query: 631 H-AILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQISDR 669
+ L IRD + D+A V A N G S+ + + +
Sbjct: 60 NVCELVIRDVTGEDSASIMVKAINIAGETSSHAFLLVQAK 99
Score = 65.8 bits (161), Expect = 6e-13
Identities = 26/101 (25%), Positives = 39/101 (38%), Gaps = 10/101 (9%)
Query: 1134 APKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQ-- 1191
APKI + + TV G + V G+P P W NG ++ RI + E+
Sbjct: 5 APKIFERI--QSQTVGQGSDAHFRVRVVGKPDPECEWYKNGVKIERSDRIYWYWPEDNVC 62
Query: 1192 --TIYRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYVVDK 1230
I DS S ++ +N G S+ + V K
Sbjct: 63 ELVIRD----VTGEDSASIMVKAINIAGETSSHAFLLVQAK 99
Score = 49.6 bits (119), Expect = 3e-07
Identities = 18/94 (19%), Positives = 37/94 (39%), Gaps = 1/94 (1%)
Query: 183 PPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIII- 241
P+I + + +G + ++ G E KNG ++ DR + +D +
Sbjct: 5 APKIFERIQSQTVGQGSDAHFRVRVVGKPDPECEWYKNGVKIERSDRIYWYWPEDNVCEL 64
Query: 242 FIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITG 275
I+++ ED+ V N +G S + +
Sbjct: 65 VIRDVTGEDSASIMVKAINIAGETSSHAFLLVQA 98
Score = 49.6 bits (119), Expect = 3e-07
Identities = 18/94 (19%), Positives = 37/94 (39%), Gaps = 1/94 (1%)
Query: 1790 PPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIII- 1848
P+I + + +G + ++ G E KNG ++ DR + +D +
Sbjct: 5 APKIFERIQSQTVGQGSDAHFRVRVVGKPDPECEWYKNGVKIERSDRIYWYWPEDNVCEL 64
Query: 1849 FIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITG 1882
I+++ ED+ V N +G S + +
Sbjct: 65 VIRDVTGEDSASIMVKAINIAGETSSHAFLLVQA 98
Score = 49.6 bits (119), Expect = 3e-07
Identities = 19/79 (24%), Positives = 30/79 (37%)
Query: 1430 RDITVKAGEDFSIHVPFMAFPQPAAFWFANDSIIDDSDTRVHKQLTMNSASLVVKNSQRS 1489
+ TV G D V + P P W+ N I+ SD N LV+++
Sbjct: 13 QSQTVGQGSDAHFRVRVVGKPDPECEWYKNGVKIERSDRIYWYWPEDNVCELVIRDVTGE 72
Query: 1490 DGGQYRLQLKNPAGFDTAT 1508
D ++ N AG ++
Sbjct: 73 DSASIMVKAINIAGETSSH 91
>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo
sapiens}
Length = 99
Score = 108 bits (271), Expect = 7e-28
Identities = 24/93 (25%), Positives = 41/93 (44%)
Query: 478 AKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYT 537
+ P I+ L++ + A+F TG P+PT W K + IT ++ + + +
Sbjct: 4 SSKPVIVTGLQDTTVSSDSVAKFAVKATGEPRPTAIWTKDGKAITQGGKYKLSEDKGGFF 63
Query: 538 LIINSVYGVDADEYVCRAVNKGGVKSTKAELII 570
L I+ D+ Y C N G S+ +L I
Sbjct: 64 LEIHKTDTSDSGLYTCTVKNSAGSVSSSCKLTI 96
Score = 108 bits (271), Expect = 7e-28
Identities = 24/93 (25%), Positives = 41/93 (44%)
Query: 2085 AKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYT 2144
+ P I+ L++ + A+F TG P+PT W K + IT ++ + + +
Sbjct: 4 SSKPVIVTGLQDTTVSSDSVAKFAVKATGEPRPTAIWTKDGKAITQGGKYKLSEDKGGFF 63
Query: 2145 LIINSVYGVDADEYVCRAVNKGGVKSTKAELII 2177
L I+ D+ Y C N G S+ +L I
Sbjct: 64 LEIHKTDTSDSGLYTCTVKNSAGSVSSSCKLTI 96
Score = 103 bits (260), Expect = 2e-26
Identities = 28/92 (30%), Positives = 45/92 (48%)
Query: 89 EKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRL 148
KP + L+D V + +ATG P P W ++G+ I+ G +Y++ G F L
Sbjct: 5 SKPVIVTGLQDTTVSSDSVAKFAVKATGEPRPTAIWTKDGKAITQGGKYKLSEDKGGFFL 64
Query: 149 HFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKI 180
++ D+G YTC NS G +S ++ I
Sbjct: 65 EIHKTDTSDSGLYTCTVKNSAGSVSSSCKLTI 96
Score = 103 bits (260), Expect = 2e-26
Identities = 28/92 (30%), Positives = 45/92 (48%)
Query: 1696 EKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRL 1755
KP + L+D V + +ATG P P W ++G+ I+ G +Y++ G F L
Sbjct: 5 SKPVIVTGLQDTTVSSDSVAKFAVKATGEPRPTAIWTKDGKAITQGGKYKLSEDKGGFFL 64
Query: 1756 HFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKI 1787
++ D+G YTC NS G +S ++ I
Sbjct: 65 EIHKTDTSDSGLYTCTVKNSAGSVSSSCKLTI 96
Score = 74.6 bits (184), Expect = 5e-16
Identities = 20/91 (21%), Positives = 32/91 (35%), Gaps = 3/91 (3%)
Query: 570 IMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSE 629
I + P + DT + TG P+P W +D + I GG + + +
Sbjct: 3 ISSKPVIVTGLQ--DTTVSS-DSVAKFAVKATGEPRPTAIWTKDGKAITQGGKYKLSEDK 59
Query: 630 RHAILTIRDASNVDTAPYRVVAENDLGMDSA 660
L I D+ Y +N G S+
Sbjct: 60 GGFFLEIHKTDTSDSGLYTCTVKNSAGSVSS 90
Score = 68.9 bits (169), Expect = 4e-14
Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 9/97 (9%)
Query: 1134 APKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQ-- 1191
P I + L +D TV + V +G P+PT IWT +G ++ G+ K +
Sbjct: 6 KPVIVTGL--QDTTVSSDSVAKFAVKATGEPRPTAIWTKDGKAITQGGKYKLSEDKGGFF 63
Query: 1192 -TIYRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYV 1227
I++ +DSG YT + N+ GS S+SCK+ +
Sbjct: 64 LEIHK----TDTSDSGLYTCTVKNSAGSVSSSCKLTI 96
Score = 57.3 bits (139), Expect = 6e-10
Identities = 21/97 (21%), Positives = 39/97 (40%)
Query: 180 IGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYI 239
I + P I + K + G+ TK+G+ + ++K +
Sbjct: 3 ISSKPVIVTGLQDTTVSSDSVAKFAVKATGEPRPTAIWTKDGKAITQGGKYKLSEDKGGF 62
Query: 240 IIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGL 276
+ I + D+G YT + NS+GSVS + + I +
Sbjct: 63 FLEIHKTDTSDSGLYTCTVKNSAGSVSSSCKLTIKAI 99
Score = 57.3 bits (139), Expect = 6e-10
Identities = 21/97 (21%), Positives = 39/97 (40%)
Query: 1787 IGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYI 1846
I + P I + K + G+ TK+G+ + ++K +
Sbjct: 3 ISSKPVIVTGLQDTTVSSDSVAKFAVKATGEPRPTAIWTKDGKAITQGGKYKLSEDKGGF 62
Query: 1847 IIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGL 1883
+ I + D+G YT + NS+GSVS + + I +
Sbjct: 63 FLEIHKTDTSDSGLYTCTVKNSAGSVSSSCKLTIKAI 99
Score = 44.2 bits (105), Expect = 2e-05
Identities = 18/79 (22%), Positives = 29/79 (36%), Gaps = 1/79 (1%)
Query: 1430 RDITVKAGEDFSIHVPFMAFPQPAAFWFANDSIIDDSDTRVHKQLTMNSASLVVKNSQRS 1489
+D TV + V P+P A W + I + L + + S
Sbjct: 14 QDTTVSSDSVAKFAVKATGEPRPTAIWTKDGKAITQGG-KYKLSEDKGGFFLEIHKTDTS 72
Query: 1490 DGGQYRLQLKNPAGFDTAT 1508
D G Y +KN AG +++
Sbjct: 73 DSGLYTCTVKNSAGSVSSS 91
>1wis_A KIAA1514 protein; FNIII domain, sidekick-2, structural genomics,
riken structural genomics/proteomics initiative, RSGI,
unknown function; NMR {Homo sapiens} SCOP: b.1.2.1
Length = 124
Score = 108 bits (273), Expect = 8e-28
Identities = 30/120 (25%), Positives = 52/120 (43%), Gaps = 11/120 (9%)
Query: 656 GMDSAIVKIQIS---DRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHP 712
G + I + P PP + +IG S+ L +R +DG ++I+ ++VE +
Sbjct: 1 GSSGSSGTISSGVPPELPGPPTNLGISNIGPRSVTLQFRPG-YDGKTSISRWLVEAQVGV 59
Query: 713 MS---SWIRVGNT----RFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKDT 765
+ W+ + +M + L+P Y FR+ N+ G S PS S I T +
Sbjct: 60 VGEGEEWLLIHQLSNEPDARSMEVPDLNPFTCYSFRMRQVNIVGTSPPSQPSRKIQTLQS 119
Score = 103 bits (259), Expect = 7e-26
Identities = 27/122 (22%), Positives = 45/122 (36%), Gaps = 9/122 (7%)
Query: 358 GMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWI--- 414
G I + P + P PP ++ +G V L + +P DG + I + +
Sbjct: 1 GSSGSSG---TISSGVPPELPGPPTNLGISNIGPRSVTLQF-RPGYDGKTSISRWLVEAQ 56
Query: 415 DKHEVGSDAWQRVNVAICAPSQIN--IPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQI 472
+ W ++ P + +P+L Y FR+ N G S PS S +Q
Sbjct: 57 VGVVGEGEEWLLIHQLSNEPDARSMEVPDLNPFTCYSFRMRQVNIVGTSPPSQPSRKIQT 116
Query: 473 KD 474
Sbjct: 117 LQ 118
Score = 103 bits (259), Expect = 7e-26
Identities = 27/122 (22%), Positives = 45/122 (36%), Gaps = 9/122 (7%)
Query: 1965 GMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWI--- 2021
G I + P + P PP ++ +G V L + +P DG + I + +
Sbjct: 1 GSSGSSG---TISSGVPPELPGPPTNLGISNIGPRSVTLQF-RPGYDGKTSISRWLVEAQ 56
Query: 2022 DKHEVGSDAWQRVNVAICAPSQIN--IPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQI 2079
+ W ++ P + +P+L Y FR+ N G S PS S +Q
Sbjct: 57 VGVVGEGEEWLLIHQLSNEPDARSMEVPDLNPFTCYSFRMRQVNIVGTSPPSQPSRKIQT 116
Query: 2080 KD 2081
Sbjct: 117 LQ 118
Score = 100 bits (252), Expect = 5e-25
Identities = 33/129 (25%), Positives = 53/129 (41%), Gaps = 16/129 (12%)
Query: 1217 GSDSASCKVYV---VDKPSPPQGPLDVSDITPESCSLSWKPPLDDGGSPITNYVVEKYES 1273
GS +S + + P PP +S+I P S +L ++P DG + I+ ++VE
Sbjct: 1 GSSGSSGTISSGVPPELPGPPTNL-GISNIGPRSVTLQFRPG-YDGKTSISRWLVEAQVG 58
Query: 1274 ATG------FWSKLSSFVRSPAYDVFGLETNRQYRFRVRAENQYGVSEPLELDNSITAKF 1327
G +LS+ + + +V L Y FR+R N G S P + I
Sbjct: 59 VVGEGEEWLLIHQLSNEPDARSMEVPDLNPFTCYSFRMRQVNIVGTSPPSQPSRKIQ--- 115
Query: 1328 PFTVPDPPG 1336
T+ P
Sbjct: 116 --TLQSGPS 122
Score = 97.4 bits (243), Expect = 1e-23
Identities = 29/145 (20%), Positives = 49/145 (33%), Gaps = 30/145 (20%)
Query: 991 DPIKAKHPFDVPGAPGAPKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIK 1050
I + P ++PG P + S++L + +P +DG + I R++VE ++ +
Sbjct: 7 GTISSGVPPELPGPPTNLGISNIGPRSVTLQF-RPGYDGKTSISRWLVEAQVGVVGEG-- 63
Query: 1051 ASMAHIPDTSLKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCA 1110
+ L + + + R V L Y FR+
Sbjct: 64 -----------EEWLLIHQLSNEPDARSME--------------VPDLNPFTCYSFRMRQ 98
Query: 1111 VNAAGQGPWSSSSDIIMCCAPPCAP 1135
VN G P S S I P
Sbjct: 99 VNIVGTSPPSQPSRKIQ--TLQSGP 121
Score = 94.3 bits (235), Expect = 1e-22
Identities = 26/123 (21%), Positives = 46/123 (37%), Gaps = 12/123 (9%)
Query: 891 EMVLIFEVLDRPHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNS----- 945
+ + P PP NL S+TL + P D G + I+ ++VE +
Sbjct: 7 GTISSGVPPELPGPPTNLGISNIGPRSVTLQFRPGYD-GKTSISRWLVEAQVGVVGEGEE 65
Query: 946 -TVWTKVSSYVTTPFVRVRNLAIGSTYEFRVMAENQYGLSKPALTIDPIKAKHPFDVPGA 1004
+ ++S+ + V +L + Y FR+ N G S P+ I+
Sbjct: 66 WLLIHQLSNEPDARSMEVPDLNPFTCYSFRMRQVNIVGTSPPSQPSRKIQTL-----QSG 120
Query: 1005 PGA 1007
P +
Sbjct: 121 PSS 123
Score = 89.3 bits (222), Expect = 6e-21
Identities = 32/128 (25%), Positives = 48/128 (37%), Gaps = 14/128 (10%)
Query: 262 SGSVSGTFTINI-TGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDIS 320
S SGT + + LPGPP +S I + TL + P YDG ++ ++VE +
Sbjct: 2 SSGSSGTISSGVPPELPGPPTNL-GISNIGPRSVTLQFRPG-YDGKTSISRWLVEAQVGV 59
Query: 321 MPHWIC------ISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSP 374
+ +S + V L Y F + VN G PP + I+
Sbjct: 60 VGEGEEWLLIHQLSNEPDARSMEVPDLNPFTCYSFRMRQVNIVGTSPPSQPSRKIQT--- 116
Query: 375 YDKPSPPG 382
S P
Sbjct: 117 --LQSGPS 122
Score = 89.3 bits (222), Expect = 6e-21
Identities = 32/128 (25%), Positives = 48/128 (37%), Gaps = 14/128 (10%)
Query: 1869 SGSVSGTFTINI-TGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDIS 1927
S SGT + + LPGPP +S I + TL + P YDG ++ ++VE +
Sbjct: 2 SSGSSGTISSGVPPELPGPPTNL-GISNIGPRSVTLQFRPG-YDGKTSISRWLVEAQVGV 59
Query: 1928 MPHWIC------ISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSP 1981
+ +S + V L Y F + VN G PP + I+
Sbjct: 60 VGEGEEWLLIHQLSNEPDARSMEVPDLNPFTCYSFRMRQVNIVGTSPPSQPSRKIQT--- 116
Query: 1982 YDKPSPPG 1989
S P
Sbjct: 117 --LQSGPS 122
Score = 75.1 bits (185), Expect = 6e-16
Identities = 25/133 (18%), Positives = 42/133 (31%), Gaps = 41/133 (30%)
Query: 1559 VDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEG 1618
+ S++L + +P +DG + I R++VE + G
Sbjct: 27 SNIGPRSVTLQF-RPGYDGKTSISRWLVEAQ---------------------------VG 58
Query: 1619 KSIGSERGSTAQFLEREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKS 1678
E L E S V +L Y FR+ VN +G S
Sbjct: 59 VVGEGEEWLLIHQLSNEPD-------------ARSMEVPDLNPFTCYSFRMRQVNIVGTS 105
Query: 1679 EPSICTTPVKICE 1691
PS + ++ +
Sbjct: 106 PPSQPSRKIQTLQ 118
Score = 62.4 bits (152), Expect = 2e-11
Identities = 16/68 (23%), Positives = 29/68 (42%), Gaps = 5/68 (7%)
Query: 22 YIIERRE---VGGAIWLKCNDYNVL--ECSFSVLNLVEGNDYEFRIIAVNAIGKSEPSIC 76
+++E + G WL + + S V +L Y FR+ VN +G S PS
Sbjct: 51 WLVEAQVGVVGEGEEWLLIHQLSNEPDARSMEVPDLNPFTCYSFRMRQVNIVGTSPPSQP 110
Query: 77 TTPVKICE 84
+ ++ +
Sbjct: 111 SRKIQTLQ 118
Score = 54.7 bits (132), Expect = 1e-08
Identities = 19/96 (19%), Positives = 33/96 (34%), Gaps = 7/96 (7%)
Query: 1312 GVSEPLELDNSITAKFPFTVPDPPGQPQIVDWDTNNATLMWDRPRTDGGSKIQGYKMLLK 1371
G S +I++ P +P PP I + + TL + RP DG + I + + +
Sbjct: 1 GSSGSSG---TISSGVPPELPGPPTNLGISNIGPRSVTLQF-RPGYDGKTSISRWLVEAQ 56
Query: 1372 TPTGELPTTIWSKIRPTSSTVYCKDTTMNSSNSEPG 1407
W I + +M + P
Sbjct: 57 VGVVG-EGEEWLLIHQL--SNEPDARSMEVPDLNPF 89
>1nct_A Titin; cell adhesion, glycoprotein, transmembrane, repeat, brain,
immunoglobulin fold, alternative splicing, signal,
muscle protein; NMR {Homo sapiens} SCOP: b.1.1.4 PDB:
1ncu_A 1tnm_A 1tnn_A
Length = 106
Score = 107 bits (270), Expect = 1e-27
Identities = 26/91 (28%), Positives = 41/91 (45%)
Query: 480 APEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLI 539
A I+ R+ + +A+F C G P PT++WL+ + ++ SARH + T
Sbjct: 14 AARILTKPRSMTVYEGESARFSCDTDGEPVPTVTWLRKGQVLSTSARHQVTTTKYKSTFE 73
Query: 540 INSVYGVDADEYVCRAVNKGGVKSTKAELII 570
I+SV D Y N G + + L I
Sbjct: 74 ISSVQASDEGNYSVVVENSEGKQEAEFTLTI 104
Score = 107 bits (270), Expect = 1e-27
Identities = 26/91 (28%), Positives = 41/91 (45%)
Query: 2087 APEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLI 2146
A I+ R+ + +A+F C G P PT++WL+ + ++ SARH + T
Sbjct: 14 AARILTKPRSMTVYEGESARFSCDTDGEPVPTVTWLRKGQVLSTSARHQVTTTKYKSTFE 73
Query: 2147 INSVYGVDADEYVCRAVNKGGVKSTKAELII 2177
I+SV D Y N G + + L I
Sbjct: 74 ISSVQASDEGNYSVVVENSEGKQEAEFTLTI 104
Score = 101 bits (253), Expect = 2e-25
Identities = 24/93 (25%), Positives = 38/93 (40%)
Query: 88 GEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFR 147
+ + + V G+ C+ G PVP WLR G+ +S+ AR++V T
Sbjct: 12 TLAARILTKPRSMTVYEGESARFSCDTDGEPVPTVTWLRKGQVLSTSARHQVTTTKYKST 71
Query: 148 LHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKI 180
+ V D G+Y+ NS G + I
Sbjct: 72 FEISSVQASDEGNYSVVVENSEGKQEAEFTLTI 104
Score = 101 bits (253), Expect = 2e-25
Identities = 24/93 (25%), Positives = 38/93 (40%)
Query: 1695 GEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFR 1754
+ + + V G+ C+ G PVP WLR G+ +S+ AR++V T
Sbjct: 12 TLAARILTKPRSMTVYEGESARFSCDTDGEPVPTVTWLRKGQVLSTSARHQVTTTKYKST 71
Query: 1755 LHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKI 1787
+ V D G+Y+ NS G + I
Sbjct: 72 FEISSVQASDEGNYSVVVENSEGKQEAEFTLTI 104
Score = 76.6 bits (189), Expect = 1e-16
Identities = 27/111 (24%), Positives = 42/111 (37%), Gaps = 7/111 (6%)
Query: 556 VNKGGVKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNE 615
++ S+K L A + PR + +GE+ G P P +TW R +
Sbjct: 1 MHHHHHHSSKTTL----AARILTKPR---SMTVYEGESARFSCDTDGEPVPTVTWLRKGQ 53
Query: 616 VIESGGHFHVETSERHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQI 666
V+ + V T++ + I D Y VV EN G A + I
Sbjct: 54 VLSTSARHQVTTTKYKSTFEISSVQASDEGNYSVVVENSEGKQEAEFTLTI 104
Score = 68.5 bits (168), Expect = 8e-14
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Query: 1133 CAPKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQT 1192
A +I + R MTV GE + G P PT W G +S R + T++ ++
Sbjct: 13 LAARILTKP--RSMTVYEGESARFSCDTDGEPVPTVTWLRKGQVLSTSARHQVTTTKYKS 70
Query: 1193 IYRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYV 1227
+ S +A+D G+Y++ + N+ G A + +
Sbjct: 71 TFEISSV-QASDEGNYSVVVENSEGKQEAEFTLTI 104
Score = 60.4 bits (147), Expect = 6e-11
Identities = 25/102 (24%), Positives = 44/102 (43%), Gaps = 2/102 (1%)
Query: 173 HTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGD-QPMEVSLTKNGRVVQSDDRFK 231
H K RI P ++ + EG++ + G+ P V+ + G+V+ + R +
Sbjct: 4 HHHHSSKTTLAARILTKPRSMTVYEGESARFSCDTDGEPVP-TVTWLRKGQVLSTSARHQ 62
Query: 232 FTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINI 273
T I ++ D G+Y+V + NS G FT+ I
Sbjct: 63 VTTTKYKSTFEISSVQASDEGNYSVVVENSEGKQEAEFTLTI 104
Score = 60.4 bits (147), Expect = 6e-11
Identities = 25/102 (24%), Positives = 44/102 (43%), Gaps = 2/102 (1%)
Query: 1780 HTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGD-QPMEVSLTKNGRVVQSDDRFK 1838
H K RI P ++ + EG++ + G+ P V+ + G+V+ + R +
Sbjct: 4 HHHHSSKTTLAARILTKPRSMTVYEGESARFSCDTDGEPVP-TVTWLRKGQVLSTSARHQ 62
Query: 1839 FTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINI 1880
T I ++ D G+Y+V + NS G FT+ I
Sbjct: 63 VTTTKYKSTFEISSVQASDEGNYSVVVENSEGKQEAEFTLTI 104
Score = 51.2 bits (123), Expect = 1e-07
Identities = 19/79 (24%), Positives = 29/79 (36%), Gaps = 1/79 (1%)
Query: 1430 RDITVKAGEDFSIHVPFMAFPQPAAFWFANDSIIDDSDTRVHKQLTMNSASLVVKNSQRS 1489
R +TV GE P P W ++ S R T ++ + + Q S
Sbjct: 22 RSMTVYEGESARFSCDTDGEPVPTVTWLRKGQVLSTSA-RHQVTTTKYKSTFEISSVQAS 80
Query: 1490 DGGQYRLQLKNPAGFDTAT 1508
D G Y + ++N G A
Sbjct: 81 DEGNYSVVVENSEGKQEAE 99
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor,
tight junction formation, immunoglobulin superfamily,
immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1
b.1.1.4 PDB: 3eoy_G
Length = 209
Score = 111 bits (279), Expect = 1e-27
Identities = 35/208 (16%), Positives = 60/208 (28%), Gaps = 21/208 (10%)
Query: 477 AAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTY 536
A + + +N+ + C +G P + W + T ++
Sbjct: 1 AMGSVTVHSSEPEVRIPENNPVKLSCAYSGFSSPRVEWKFDQGDTTRLVCYNNKITASYE 60
Query: 537 --------TLIINSVYGVDADEYVCRAVNKGG--VKSTKAELIIMTAPKFNVPPRFRDTA 586
+ SV D Y C +GG K +LI++ P
Sbjct: 61 DRVTFLPTGITFKSVTREDTGTYTCMVSEEGGNSYGEVKVKLIVLVPPSKPTVNIPSSAT 120
Query: 587 YFDKGENVVVK-IPFTGYPKPKITWYRDNEVIESGGHFHVETSERHAI-------LTIRD 638
G V+ G P + TW++D V+ + S + L
Sbjct: 121 I---GNRAVLTCSEQDGSPPSEYTWFKDGIVMPTNPKSTRAFSNSSYVLNPTTGELVFDP 177
Query: 639 ASNVDTAPYRVVAENDLGMDSAIVKIQI 666
S DT Y A N G +++
Sbjct: 178 LSASDTGEYSCEARNGYGTPMTSNAVRM 205
Score = 105 bits (264), Expect = 1e-25
Identities = 32/205 (15%), Positives = 67/205 (32%), Gaps = 18/205 (8%)
Query: 90 KPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFR-- 147
++ +P + L C +G P+ W + + + Y +
Sbjct: 4 SVTVHSSEPEVRIPENNPVKLSCAYSGFSSPRVEWKFDQGDTTRLVCYNNKITASYEDRV 63
Query: 148 ------LHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIG--TPPRIDRMPNALYIPEGD 199
+ F VT D G YTC G ++ +VK+ PP + G+
Sbjct: 64 TFLPTGITFKSVTREDTGTYTCMVSEEGGNSYGEVKVKLIVLVPPSKPTVNIPSSATIGN 123
Query: 200 NTKVK-IFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIII-------FIKEIRKEDA 251
+ G P E + K+G V+ ++ + + ++ + D
Sbjct: 124 RAVLTCSEQDGSPPSEYTWFKDGIVMPTNPKSTRAFSNSSYVLNPTTGELVFDPLSASDT 183
Query: 252 GDYTVNLSNSSGSVSGTFTINITGL 276
G+Y+ N G+ + + + +
Sbjct: 184 GEYSCEARNGYGTPMTSNAVRMEAV 208
Score = 105 bits (264), Expect = 1e-25
Identities = 32/205 (15%), Positives = 67/205 (32%), Gaps = 18/205 (8%)
Query: 1697 KPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFR-- 1754
++ +P + L C +G P+ W + + + Y +
Sbjct: 4 SVTVHSSEPEVRIPENNPVKLSCAYSGFSSPRVEWKFDQGDTTRLVCYNNKITASYEDRV 63
Query: 1755 ------LHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIG--TPPRIDRMPNALYIPEGD 1806
+ F VT D G YTC G ++ +VK+ PP + G+
Sbjct: 64 TFLPTGITFKSVTREDTGTYTCMVSEEGGNSYGEVKVKLIVLVPPSKPTVNIPSSATIGN 123
Query: 1807 NTKVK-IFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIII-------FIKEIRKEDA 1858
+ G P E + K+G V+ ++ + + ++ + D
Sbjct: 124 RAVLTCSEQDGSPPSEYTWFKDGIVMPTNPKSTRAFSNSSYVLNPTTGELVFDPLSASDT 183
Query: 1859 GDYTVNLSNSSGSVSGTFTINITGL 1883
G+Y+ N G+ + + + +
Sbjct: 184 GEYSCEARNGYGTPMTSNAVRMEAV 208
Score = 82.3 bits (203), Expect = 2e-17
Identities = 27/184 (14%), Positives = 52/184 (28%), Gaps = 21/184 (11%)
Query: 2002 NLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYA 2061
+ W +++ + RV P+ I ++ +
Sbjct: 35 RVEWKFD----QGDTTRLVCYNNKITASYEDRVTFL---PTGITFKSVTREDTGTYTCMV 87
Query: 2062 QNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTIT-GCPKPTIS 2120
E G S + + P P ++A + A C+ G P +
Sbjct: 88 SEEGGNSY-GEVKVKLIVLVP-----PSKPTVNIPSSATIGNRAVLTCSEQDGSPPSEYT 141
Query: 2121 WLKGSREITPSARHHIFAEGDTY-------TLIINSVYGVDADEYVCRAVNKGGVKSTKA 2173
W K + + + +Y L+ + + D EY C A N G T
Sbjct: 142 WFKDGIVMPTNPKSTRAFSNSSYVLNPTTGELVFDPLSASDTGEYSCEARNGYGTPMTSN 201
Query: 2174 ELII 2177
+ +
Sbjct: 202 AVRM 205
Score = 80.4 bits (198), Expect = 9e-17
Identities = 26/126 (20%), Positives = 46/126 (36%), Gaps = 14/126 (11%)
Query: 63 IAVNAIGKSEPSICTTPVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEAT-GTPVPK 121
+ G S VK+ V P +G L C G+P +
Sbjct: 86 MVSEEGGNS---YGEVKVKLIVLV---PPSKPTVNIPSSATIGNRAVLTCSEQDGSPPSE 139
Query: 122 CRWLRNGREISSGARYRVETAGGVFR-------LHFNEVTDVDNGDYTCEAYNSVGFAHT 174
W ++G + + + + + L F+ ++ D G+Y+CEA N G T
Sbjct: 140 YTWFKDGIVMPTNPKSTRAFSNSSYVLNPTTGELVFDPLSASDTGEYSCEARNGYGTPMT 199
Query: 175 SSRVKI 180
S+ V++
Sbjct: 200 SNAVRM 205
Score = 80.4 bits (198), Expect = 9e-17
Identities = 26/126 (20%), Positives = 46/126 (36%), Gaps = 14/126 (11%)
Query: 1670 IAVNAIGKSEPSICTTPVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEAT-GTPVPK 1728
+ G S VK+ V P +G L C G+P +
Sbjct: 86 MVSEEGGNS---YGEVKVKLIVLV---PPSKPTVNIPSSATIGNRAVLTCSEQDGSPPSE 139
Query: 1729 CRWLRNGREISSGARYRVETAGGVFR-------LHFNEVTDVDNGDYTCEAYNSVGFAHT 1781
W ++G + + + + + L F+ ++ D G+Y+CEA N G T
Sbjct: 140 YTWFKDGIVMPTNPKSTRAFSNSSYVLNPTTGELVFDPLSASDTGEYSCEARNGYGTPMT 199
Query: 1782 SSRVKI 1787
S+ V++
Sbjct: 200 SNAVRM 205
Score = 74.2 bits (182), Expect = 1e-14
Identities = 20/131 (15%), Positives = 39/131 (29%), Gaps = 12/131 (9%)
Query: 2084 AAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTY 2143
A + + +N+ + C +G P + W + T ++
Sbjct: 1 AMGSVTVHSSEPEVRIPENNPVKLSCAYSGFSSPRVEWKFDQGDTTRLVCYNNKITASYE 60
Query: 2144 --------TLIINSVYGVDADEYVCRAVNKGG--VKSTKAELIIMTAPKFNVPPRFRDTA 2193
+ SV D Y C +GG K +LI++ P ++
Sbjct: 61 DRVTFLPTGITFKSVTREDTGTYTCMVSEEGGNSYGEVKVKLIVLVPPSKPTVN--IPSS 118
Query: 2194 YFESDVVVVVC 2204
+ V+ C
Sbjct: 119 ATIGNRAVLTC 129
Score = 51.9 bits (124), Expect = 5e-07
Identities = 16/101 (15%), Positives = 33/101 (32%), Gaps = 9/101 (8%)
Query: 1134 APKITSDLSIRDMTVLAGEEFTIT-VPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQT 1192
P + + G +T G P W +G + + + S +
Sbjct: 107 PPSKPTVN--IPSSATIGNRAVLTCSEQDGSPPSEYTWFKDGIVMPTNPKSTRAFSNSSY 164
Query: 1193 IYRNKSAK------RATDSGSYTIQLVNTVGSDSASCKVYV 1227
+ + + A+D+G Y+ + N G+ S V +
Sbjct: 165 VLNPTTGELVFDPLSASDTGEYSCEARNGYGTPMTSNAVRM 205
Score = 45.3 bits (107), Expect = 6e-05
Identities = 18/116 (15%), Positives = 37/116 (31%), Gaps = 9/116 (7%)
Query: 1135 PKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQTIY 1194
+T S ++ + ++ +SG P W + + + + + +
Sbjct: 3 GSVTVHSSEPEVRIPENNPVKLSCAYSGFSSPRVEWKFDQGDTTRLVCYNNKITASYEDR 62
Query: 1195 RNKSAK-------RATDSGSYTIQLVNTVGSDSASCKVY--VVDKPSPPQGPLDVS 1241
D+G+YT + G+ KV V+ PS P + S
Sbjct: 63 VTFLPTGITFKSVTREDTGTYTCMVSEEGGNSYGEVKVKLIVLVPPSKPTVNIPSS 118
Score = 45.0 bits (106), Expect = 8e-05
Identities = 19/116 (16%), Positives = 36/116 (31%), Gaps = 11/116 (9%)
Query: 1400 NSSNSEPGKQSGPVIVEEQPNKPVMDLSGVRDITVKAGEDFSIH-VPFMAFPQPAAFWFA 1458
+ G+ +IV P+KP ++ + G + P WF
Sbjct: 89 EEGGNSYGEVKVKLIVLVPPSKPTVN----IPSSATIGNRAVLTCSEQDGSPPSEYTWFK 144
Query: 1459 NDSIIDDSDTRVHKQ------LTMNSASLVVKNSQRSDGGQYRLQLKNPAGFDTAT 1508
+ ++ + L + LV SD G+Y + +N G +
Sbjct: 145 DGIVMPTNPKSTRAFSNSSYVLNPTTGELVFDPLSASDTGEYSCEARNGYGTPMTS 200
Score = 44.2 bits (104), Expect = 2e-04
Identities = 18/142 (12%), Positives = 32/142 (22%), Gaps = 33/142 (23%)
Query: 1410 SGPVIVEEQPNKPVMDLSGVRDITVKAGEDFSIHVPFMAFPQPAAFWFANDSII------ 1463
G V V ++ + + + F P W +
Sbjct: 2 MGSVTVHSSE----------PEVRIPENNPVKLSCAYSGFSSPRVEWKFDQGDTTRLVCY 51
Query: 1464 -DDSDTRVHKQLTMNSASLVVKNSQRSDGGQYRLQLKNPAGFDTATLHSRLRTLPDSVNP 1522
+ ++T + K+ R D G Y + G + +L L
Sbjct: 52 NNKITASYEDRVTFLPTGITFKSVTREDTGTYTCMVSEEGGNSYGEVKVKLIVL------ 105
Query: 1523 RCHLPSSTSKERPKFPTHPNHQ 1544
P PT
Sbjct: 106 ----------VPPSKPTVNIPS 117
Score = 39.9 bits (93), Expect = 0.004
Identities = 23/125 (18%), Positives = 39/125 (31%), Gaps = 10/125 (8%)
Query: 183 PPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYII-- 240
+ + IPE + K+ Y+G V + + + Y
Sbjct: 4 SVTVHSSEPEVRIPENNPVKLSCAYSGFSSPRVEWKFDQGDTTRLVCYNNKITASYEDRV 63
Query: 241 ------IFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGP--PIGPLDVSEITKH 292
I K + +ED G YT +S G+ G + + L P P + S +
Sbjct: 64 TFLPTGITFKSVTREDTGTYTCMVSEEGGNSYGEVKVKLIVLVPPSKPTVNIPSSATIGN 123
Query: 293 TCTLH 297
L
Sbjct: 124 RAVLT 128
Score = 39.9 bits (93), Expect = 0.004
Identities = 23/125 (18%), Positives = 39/125 (31%), Gaps = 10/125 (8%)
Query: 1790 PPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYII-- 1847
+ + IPE + K+ Y+G V + + + Y
Sbjct: 4 SVTVHSSEPEVRIPENNPVKLSCAYSGFSSPRVEWKFDQGDTTRLVCYNNKITASYEDRV 63
Query: 1848 ------IFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGP--PIGPLDVSEITKH 1899
I K + +ED G YT +S G+ G + + L P P + S +
Sbjct: 64 TFLPTGITFKSVTREDTGTYTCMVSEEGGNSYGEVKVKLIVLVPPSKPTVNIPSSATIGN 123
Query: 1900 TCTLH 1904
L
Sbjct: 124 RAVLT 128
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA,
receptor-ligand complex transferase; HET: NAG NDG MAN
BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Length = 347
Score = 115 bits (289), Expect = 1e-27
Identities = 32/197 (16%), Positives = 61/197 (30%), Gaps = 15/197 (7%)
Query: 481 PEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLII 540
P + V + NA+ + +C + G W+ E + + +
Sbjct: 159 PTLKVQVPNASVDVGDDVLLRCQVEGRGLEQAGWILTELEQSATVMKSGGLPSLG-LTLA 217
Query: 541 NSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPF 600
N ++ C A N G ++ + P + + +
Sbjct: 218 NVTSDLNRKNVTCWAENDVGRAEVSVQVNV-------SFPASVQLHTAVEMHHWCIPFSV 270
Query: 601 TGYPKPKITWYRDNEVIESGGHFHVE-------TSERHAILTIRDASNVDTAPYRVVAEN 653
G P P + W + V+ E + RH L + ++V+ Y ++A N
Sbjct: 271 DGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAAN 330
Query: 654 DLGMDSAIVKIQISDRP 670
G SA + D P
Sbjct: 331 PFGQASASIMAAFMDNP 347
Score = 102 bits (256), Expect = 3e-23
Identities = 37/198 (18%), Positives = 69/198 (34%), Gaps = 16/198 (8%)
Query: 89 EKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREIS-SGARYRVETAGGVFR 147
P V + + V +G + L+C+ G + + W+ E S + + + G+
Sbjct: 157 GVPTLKVQVPNASVDVGDDVLLRCQVEGRGLEQAGWILTELEQSATVMKSGGLPSLGLTL 216
Query: 148 LHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFY 207
N +D++ + TC A N VG A S +V + P + + F
Sbjct: 217 A--NVTSDLNRKNVTCWAENDVGRAEVSVQVNVSFPASVQLHT-----AVEMHHWCIPFS 269
Query: 208 AGDQPM-EVSLTKNGRVVQSDDRFKFTVLDDYII-------IFIKEIRKEDAGDYTVNLS 259
QP + NG V+ L+ + + + + G+YT+ +
Sbjct: 270 VDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAA 329
Query: 260 NSSGSVSGTFTINITGLP 277
N G S + P
Sbjct: 330 NPFGQASASIMAAFMDNP 347
Score = 102 bits (256), Expect = 3e-23
Identities = 37/198 (18%), Positives = 69/198 (34%), Gaps = 16/198 (8%)
Query: 1696 EKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREIS-SGARYRVETAGGVFR 1754
P V + + V +G + L+C+ G + + W+ E S + + + G+
Sbjct: 157 GVPTLKVQVPNASVDVGDDVLLRCQVEGRGLEQAGWILTELEQSATVMKSGGLPSLGLTL 216
Query: 1755 LHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFY 1814
N +D++ + TC A N VG A S +V + P + + F
Sbjct: 217 A--NVTSDLNRKNVTCWAENDVGRAEVSVQVNVSFPASVQLHT-----AVEMHHWCIPFS 269
Query: 1815 AGDQPM-EVSLTKNGRVVQSDDRFKFTVLDDYII-------IFIKEIRKEDAGDYTVNLS 1866
QP + NG V+ L+ + + + + G+YT+ +
Sbjct: 270 VDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAA 329
Query: 1867 NSSGSVSGTFTINITGLP 1884
N G S + P
Sbjct: 330 NPFGQASASIMAAFMDNP 347
Score = 68.6 bits (167), Expect = 6e-12
Identities = 23/128 (17%), Positives = 41/128 (32%), Gaps = 19/128 (14%)
Query: 454 AQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTIS 513
A+N+ G + S V + P ++ A++ H+ ++ G P P++
Sbjct: 232 AENDVG---RAEVSVQVNVSFPA---------SVQLHTAVEMHHWCIPFSVDGQPAPSLR 279
Query: 514 WLKGSREITPSARHHIFAEGDTY-------TLIINSVYGVDADEYVCRAVNKGGVKSTKA 566
WL + ++ L +N V+ Y A N G S
Sbjct: 280 WLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQASASI 339
Query: 567 ELIIMTAP 574
M P
Sbjct: 340 MAAFMDNP 347
Score = 68.6 bits (167), Expect = 6e-12
Identities = 23/128 (17%), Positives = 41/128 (32%), Gaps = 19/128 (14%)
Query: 2061 AQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTIS 2120
A+N+ G + S V + P ++ A++ H+ ++ G P P++
Sbjct: 232 AENDVG---RAEVSVQVNVSFPA---------SVQLHTAVEMHHWCIPFSVDGQPAPSLR 279
Query: 2121 WLKGSREITPSARHHIFAEGDTY-------TLIINSVYGVDADEYVCRAVNKGGVKSTKA 2173
WL + ++ L +N V+ Y A N G S
Sbjct: 280 WLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQASASI 339
Query: 2174 ELIIMTAP 2181
M P
Sbjct: 340 MAAFMDNP 347
Score = 68.2 bits (166), Expect = 8e-12
Identities = 15/117 (12%), Positives = 33/117 (28%), Gaps = 7/117 (5%)
Query: 2088 PEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLII 2147
P + V + NA+ + +C + G W+ E + + +
Sbjct: 159 PTLKVQVPNASVDVGDDVLLRCQVEGRGLEQAGWILTELEQSATVMKSGGLPSLG-LTLA 217
Query: 2148 NSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPRFRDTAYFESDVVVVVC 2204
N ++ C A N G ++ + + P + E +
Sbjct: 218 NVTSDLNRKNVTCWAENDVGRAEVSVQVNV------SFPASVQLHTAVEMHHWCIPF 268
Score = 59.0 bits (142), Expect = 7e-09
Identities = 34/175 (19%), Positives = 54/175 (30%), Gaps = 24/175 (13%)
Query: 1064 VLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVC-AVNAAGQGPWSSS 1122
W+ + + L L VTS + C A N G +
Sbjct: 190 AGWILTELEQSATVMKSGGLPSLGLTLA--NVTSDLNRKNV---TCWAENDVG---RAEV 241
Query: 1123 SDIIMCCAPPCAPKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGR 1182
S + P S++ T + + I G+P P+ W NG ++
Sbjct: 242 SVQVNVSFPA---------SVQLHTAVEMHHWCIPFSVDGQPAPSLRWLFNGSVLNETSF 292
Query: 1183 IKFETSENQTIYRNKSAK------RATDSGSYTIQLVNTVGSDSASCKVYVVDKP 1231
I E E + ++G+YT+ N G SAS +D P
Sbjct: 293 IFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQASASIMAAFMDNP 347
Score = 50.5 bits (120), Expect = 4e-06
Identities = 34/230 (14%), Positives = 58/230 (25%), Gaps = 30/230 (13%)
Query: 1116 QGPWSSSSDIIMCCAPPCAPKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGD 1175
Q + T + + + +V G++ + GR W +
Sbjct: 138 QKLQCHGQGPLAHMPNASCGVPTLKVQVPNASVDVGDDVLLRCQVEGRGLEQAGWILTEL 197
Query: 1176 EVSPDGRIKFETSENQTIYRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYVVDKPSPPQ 1235
E S N ++ + + T N VG S +V V S
Sbjct: 198 EQSATVMKSGGLPSLGLTLANVTSD--LNRKNVTCWAENDVGRAEVSVQVNVSFPASVQL 255
Query: 1236 GPLDVSDITPESC--------SLSWKPP--LDDGGSPITNYVVEKYESATGFWSKLSSFV 1285
SL W + + S I +E + T L +
Sbjct: 256 HTAVEMHHWCIPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCL--RL 313
Query: 1286 RSPAYDVFGLETNRQYRFRVRAENQYGVSEPLELDNSITAKFPFTVPDPP 1335
P + G + + A N +G +A D P
Sbjct: 314 NQPTHVNNG-------NYTLLAANPFG---------QASASIMAAFMDNP 347
Score = 45.9 bits (108), Expect = 1e-04
Identities = 12/122 (9%), Positives = 30/122 (24%), Gaps = 5/122 (4%)
Query: 1430 RDITVKAGEDFSIHVPFMAFPQPAAFWFANDSIIDDSDTRVHKQLTMNSASLVVKNSQRS 1489
+ +V G+D + A W + + + + + +
Sbjct: 166 PNASVDVGDDVLLRCQVEGRGLEQAGWILTELEQSATVMK--SGGLPSLGLTLANVTSDL 223
Query: 1490 DGGQYRLQLKNPAGFDTATLHSRLRTLPDSVNPRCHLPSSTSKERPKFPTHPNHQPWLKW 1549
+ +N G ++ + + + H F P L+W
Sbjct: 224 NRKNVTCWAENDVGRAEVSVQVNVSFPA---SVQLHTAVEMHHWCIPFSVDGQPAPSLRW 280
Query: 1550 AR 1551
Sbjct: 281 LF 282
Score = 44.7 bits (105), Expect = 2e-04
Identities = 11/120 (9%), Positives = 28/120 (23%), Gaps = 1/120 (0%)
Query: 182 TPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIII 241
P + + GD+ ++ G + + K L +
Sbjct: 157 GVPTLKVQVPNASVDVGDDVLLRCQVEGRGLEQAGWILTELEQSATVM-KSGGLPSLGLT 215
Query: 242 FIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPP 301
+ + T N G + +N++ + ++ P
Sbjct: 216 LANVTSDLNRKNVTCWAENDVGRAEVSVQVNVSFPASVQLHTAVEMHHWCIPFSVDGQPA 275
Score = 44.7 bits (105), Expect = 2e-04
Identities = 11/120 (9%), Positives = 28/120 (23%), Gaps = 1/120 (0%)
Query: 1789 TPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIII 1848
P + + GD+ ++ G + + K L +
Sbjct: 157 GVPTLKVQVPNASVDVGDDVLLRCQVEGRGLEQAGWILTELEQSATVM-KSGGLPSLGLT 215
Query: 1849 FIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPP 1908
+ + T N G + +N++ + ++ P
Sbjct: 216 LANVTSDLNRKNVTCWAENDVGRAEVSVQVNVSFPASVQLHTAVEMHHWCIPFSVDGQPA 275
Score = 44.7 bits (105), Expect = 2e-04
Identities = 20/101 (19%), Positives = 37/101 (36%), Gaps = 6/101 (5%)
Query: 1423 VMDLSGVRDITVKAGEDFSIHVPFMAFPQPAAFWFANDSIIDDSDTRVHKQL------TM 1476
V + V+ T + I P P+ W N S+++++ + L T+
Sbjct: 247 VSFPASVQLHTAVEMHHWCIPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETV 306
Query: 1477 NSASLVVKNSQRSDGGQYRLQLKNPAGFDTATLHSRLRTLP 1517
L + + G Y L NP G +A++ + P
Sbjct: 307 RHGCLRLNQPTHVNNGNYTLLAANPFGQASASIMAAFMDNP 347
>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo
sapiens}
Length = 103
Score = 107 bits (269), Expect = 2e-27
Identities = 21/92 (22%), Positives = 33/92 (35%)
Query: 479 KAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTL 538
AP I + +R+ N +F + P + W E+ S++ H TL
Sbjct: 7 HAPRITLRMRSHRVPCGQNTRFILNVQSKPTAEVKWYHNGVELQESSKIHYTNTSGVLTL 66
Query: 539 IINSVYGVDADEYVCRAVNKGGVKSTKAELII 570
I + D+ Y N G S A L +
Sbjct: 67 EILDCHTDDSGTYRAVCTNYKGEASDYATLDV 98
Score = 107 bits (269), Expect = 2e-27
Identities = 21/92 (22%), Positives = 33/92 (35%)
Query: 2086 KAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTL 2145
AP I + +R+ N +F + P + W E+ S++ H TL
Sbjct: 7 HAPRITLRMRSHRVPCGQNTRFILNVQSKPTAEVKWYHNGVELQESSKIHYTNTSGVLTL 66
Query: 2146 IINSVYGVDADEYVCRAVNKGGVKSTKAELII 2177
I + D+ Y N G S A L +
Sbjct: 67 EILDCHTDDSGTYRAVCTNYKGEASDYATLDV 98
Score = 103 bits (258), Expect = 6e-26
Identities = 18/92 (19%), Positives = 32/92 (34%)
Query: 89 EKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRL 148
P + ++ VP G+ P + +W NG E+ ++ GV L
Sbjct: 7 HAPRITLRMRSHRVPCGQNTRFILNVQSKPTAEVKWYHNGVELQESSKIHYTNTSGVLTL 66
Query: 149 HFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKI 180
+ D+G Y N G A + + +
Sbjct: 67 EILDCHTDDSGTYRAVCTNYKGEASDYATLDV 98
Score = 103 bits (258), Expect = 6e-26
Identities = 18/92 (19%), Positives = 32/92 (34%)
Query: 1696 EKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRL 1755
P + ++ VP G+ P + +W NG E+ ++ GV L
Sbjct: 7 HAPRITLRMRSHRVPCGQNTRFILNVQSKPTAEVKWYHNGVELQESSKIHYTNTSGVLTL 66
Query: 1756 HFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKI 1787
+ D+G Y N G A + + +
Sbjct: 67 EILDCHTDDSGTYRAVCTNYKGEASDYATLDV 98
Score = 75.0 bits (185), Expect = 4e-16
Identities = 20/101 (19%), Positives = 34/101 (33%), Gaps = 5/101 (4%)
Query: 570 IMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSE 629
+ AP+ + R G+N + P ++ WY + ++ H +
Sbjct: 5 LDHAPRITLRMRSHRVP---CGQNTRFILNVQSKPTAEVKWYHNGVELQESSKIHYTNTS 61
Query: 630 RHAILTIRDASNVDTAPYRVVAENDLGMD--SAIVKIQISD 668
L I D D+ YR V N G A + + D
Sbjct: 62 GVLTLEILDCHTDDSGTYRAVCTNYKGEASDYATLDVTGGD 102
Score = 71.2 bits (175), Expect = 1e-14
Identities = 22/102 (21%), Positives = 33/102 (32%), Gaps = 9/102 (8%)
Query: 1132 PCAPKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQ 1191
AP+IT + R V G+ + +P W NG E+ +I + +
Sbjct: 6 DHAPRITLRM--RSHRVPCGQNTRFILNVQSKPTAEVKWYHNGVELQESSKIHYTNTSGV 63
Query: 1192 ---TIYRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYVVDK 1230
I DSG+Y N G S + V
Sbjct: 64 LTLEILD----CHTDDSGTYRAVCTNYKGEASDYATLDVTGG 101
Score = 62.3 bits (152), Expect = 1e-11
Identities = 23/99 (23%), Positives = 40/99 (40%)
Query: 177 RVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLD 236
+ PRI + +P G NT+ + EV NG +Q + +T
Sbjct: 2 PFTLDHAPRITLRMRSHRVPCGQNTRFILNVQSKPTAEVKWYHNGVELQESSKIHYTNTS 61
Query: 237 DYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITG 275
+ + I + +D+G Y +N G S T+++TG
Sbjct: 62 GVLTLEILDCHTDDSGTYRAVCTNYKGEASDYATLDVTG 100
Score = 62.3 bits (152), Expect = 1e-11
Identities = 23/99 (23%), Positives = 40/99 (40%)
Query: 1784 RVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLD 1843
+ PRI + +P G NT+ + EV NG +Q + +T
Sbjct: 2 PFTLDHAPRITLRMRSHRVPCGQNTRFILNVQSKPTAEVKWYHNGVELQESSKIHYTNTS 61
Query: 1844 DYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITG 1882
+ + I + +D+G Y +N G S T+++TG
Sbjct: 62 GVLTLEILDCHTDDSGTYRAVCTNYKGEASDYATLDVTG 100
Score = 48.4 bits (116), Expect = 7e-07
Identities = 19/98 (19%), Positives = 35/98 (35%), Gaps = 5/98 (5%)
Query: 1411 GPVIVEEQPNKPVMDLSGVRDITVKAGEDFSIHVPFMAFPQPAAFWFANDSIIDDSDTRV 1470
GP ++ P +R V G++ + + P W+ N + +S ++
Sbjct: 1 GPFTLDHAPRI----TLRMRSHRVPCGQNTRFILNVQSKPTAEVKWYHNGVELQESS-KI 55
Query: 1471 HKQLTMNSASLVVKNSQRSDGGQYRLQLKNPAGFDTAT 1508
H T +L + + D G YR N G +
Sbjct: 56 HYTNTSGVLTLEILDCHTDDSGTYRAVCTNYKGEASDY 93
>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C,
C-protein, skeletal muscle fast-isoform, structural
genomics, NPPSFA; NMR {Homo sapiens}
Length = 118
Score = 107 bits (270), Expect = 2e-27
Identities = 25/101 (24%), Positives = 51/101 (50%), Gaps = 1/101 (0%)
Query: 570 IMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSE 629
I PK +P R T GE + + +PF G P+P++ W + +++ HV TS+
Sbjct: 18 IAEPPKIRLPRHLRQTYIRKVGEQLNLVVPFQGKPRPQVVWTKGGAPLDT-SRVHVRTSD 76
Query: 630 RHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQISDRP 670
+ +R A+ D+ Y + + + D+A ++I++ ++
Sbjct: 77 FDTVFFVRQAARSDSGEYELSVQIENMKDTATIRIRVVEKA 117
Score = 99.8 bits (249), Expect = 1e-24
Identities = 31/118 (26%), Positives = 54/118 (45%), Gaps = 3/118 (2%)
Query: 1115 GQGPWSSSSDIIMCCAPPCAPKITSDLSIRD-MTVLAGEEFTITVPFSGRPKPTPIWTVN 1173
G + + + PKI +R GE+ + VPF G+P+P +WT
Sbjct: 2 SSGSSGTLAQPVTIREIAEPPKIRLPRHLRQTYIRKVGEQLNLVVPFQGKPRPQVVWTKG 61
Query: 1174 GDEVSPDGRIKFETSENQTIYRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYVVDKP 1231
G + R+ TS+ T++ + A R+ DSG Y + + D+A+ ++ VV+K
Sbjct: 62 GAPLDTS-RVHVRTSDFDTVFFVRQAARS-DSGEYELSVQIENMKDTATIRIRVVEKA 117
Score = 88.6 bits (220), Expect = 1e-20
Identities = 32/111 (28%), Positives = 51/111 (45%), Gaps = 4/111 (3%)
Query: 1402 SNSEPGKQSGPVIVEE--QPNKPVMDLSGVRDITVKAGEDFSIHVPFMAFPQPAAFWFAN 1459
S+ G + PV + E +P K + + K GE ++ VPF P+P W
Sbjct: 2 SSGSSGTLAQPVTIREIAEPPKIRLPRHLRQTYIRKVGEQLNLVVPFQGKPRPQVVWTKG 61
Query: 1460 DSIIDDSDTRVHKQLTMNSASLVVKNSQRSDGGQYRLQLKNPAGFDTATLH 1510
+ +D S RVH + + V+ + RSD G+Y L ++ DTAT+
Sbjct: 62 GAPLDTS--RVHVRTSDFDTVFFVRQAARSDSGEYELSVQIENMKDTATIR 110
Score = 84.0 bits (208), Expect = 4e-19
Identities = 22/119 (18%), Positives = 38/119 (31%), Gaps = 6/119 (5%)
Query: 69 GKSEPSICTTPVKICEFVGGEKPDFIVPLK---DLVVPLGKLLTLQCEATGTPVPKCRWL 125
PV I E E P +P + +G+ L L G P P+ W
Sbjct: 2 SSGSSGTLAQPVTIREIA--EPPKIRLPRHLRQTYIRKVGEQLNLVVPFQGKPRPQVVWT 59
Query: 126 RNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPP 184
+ G + + R V T+ + D+G+Y + R+++
Sbjct: 60 KGGAPLDTS-RVHVRTSDFDTVFFVRQAARSDSGEYELSVQIENMKDTATIRIRVVEKA 117
Score = 84.0 bits (208), Expect = 4e-19
Identities = 22/119 (18%), Positives = 38/119 (31%), Gaps = 6/119 (5%)
Query: 1676 GKSEPSICTTPVKICEFVGGEKPDFIVPLK---DLVVPLGKLLTLQCEATGTPVPKCRWL 1732
PV I E E P +P + +G+ L L G P P+ W
Sbjct: 2 SSGSSGTLAQPVTIREIA--EPPKIRLPRHLRQTYIRKVGEQLNLVVPFQGKPRPQVVWT 59
Query: 1733 RNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPP 1791
+ G + + R V T+ + D+G+Y + R+++
Sbjct: 60 KGGAPLDTS-RVHVRTSDFDTVFFVRQAARSDSGEYELSVQIENMKDTATIRIRVVEKA 117
Score = 79.0 bits (195), Expect = 2e-17
Identities = 17/119 (14%), Positives = 34/119 (28%), Gaps = 6/119 (5%)
Query: 459 GLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAI---QNHNAQFQCTITGCPKPTISWL 515
+ + V I++ P+I +P G P+P + W
Sbjct: 2 SSGSSGTLAQPVTIREIAEP--PKIRLPRHLRQTYIRKVGEQLNLVVPFQGKPRPQVVWT 59
Query: 516 KGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAP 574
KG + S R H+ + D+ EY + + + ++
Sbjct: 60 KGGAPLDTS-RVHVRTSDFDTVFFVRQAARSDSGEYELSVQIENMKDTATIRIRVVEKA 117
Score = 79.0 bits (195), Expect = 2e-17
Identities = 17/119 (14%), Positives = 34/119 (28%), Gaps = 6/119 (5%)
Query: 2066 GLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAI---QNHNAQFQCTITGCPKPTISWL 2122
+ + V I++ P+I +P G P+P + W
Sbjct: 2 SSGSSGTLAQPVTIREIAEP--PKIRLPRHLRQTYIRKVGEQLNLVVPFQGKPRPQVVWT 59
Query: 2123 KGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAP 2181
KG + S R H+ + D+ EY + + + ++
Sbjct: 60 KGGAPLDTS-RVHVRTSDFDTVFFVRQAARSDSGEYELSVQIENMKDTATIRIRVVEKA 117
Score = 72.0 bits (177), Expect = 7e-15
Identities = 19/102 (18%), Positives = 41/102 (40%), Gaps = 4/102 (3%)
Query: 180 IGTPPRID---RMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLD 236
I PP+I + G+ + + + G +V TK G + + R D
Sbjct: 18 IAEPPKIRLPRHLRQTYIRKVGEQLNLVVPFQGKPRPQVVWTKGGAPLDTS-RVHVRTSD 76
Query: 237 DYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPG 278
+ F+++ + D+G+Y +++ + + T I + G
Sbjct: 77 FDTVFFVRQAARSDSGEYELSVQIENMKDTATIRIRVVEKAG 118
Score = 72.0 bits (177), Expect = 7e-15
Identities = 19/102 (18%), Positives = 41/102 (40%), Gaps = 4/102 (3%)
Query: 1787 IGTPPRID---RMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLD 1843
I PP+I + G+ + + + G +V TK G + + R D
Sbjct: 18 IAEPPKIRLPRHLRQTYIRKVGEQLNLVVPFQGKPRPQVVWTKGGAPLDTS-RVHVRTSD 76
Query: 1844 DYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPG 1885
+ F+++ + D+G+Y +++ + + T I + G
Sbjct: 77 FDTVFFVRQAARSDSGEYELSVQIENMKDTATIRIRVVEKAG 118
>2yrz_A Integrin beta-4; GP150, CD104 antigen, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 118
Score = 107 bits (269), Expect = 3e-27
Identities = 24/123 (19%), Positives = 49/123 (39%), Gaps = 7/123 (5%)
Query: 358 GMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKH 417
G ++ P P V + +G + +SW +P + +QGY ++
Sbjct: 1 GSSGSSG---SHDSRLTAGVPDTPTRLVFSALGPTSLRVSWQEPRCERP--LQGYSVEYQ 55
Query: 418 EVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSV--QIKDP 475
+ R+N+ A + + + +L+ Y FRV AQ++ G ++ Q+ P
Sbjct: 56 LLNGGELHRLNIPNPAQTSVVVEDLLPNHSYVFRVRAQSQEGWGREREGVITIESQVSGP 115
Query: 476 MAA 478
+
Sbjct: 116 SSG 118
Score = 107 bits (269), Expect = 3e-27
Identities = 24/123 (19%), Positives = 49/123 (39%), Gaps = 7/123 (5%)
Query: 1965 GMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKH 2024
G ++ P P V + +G + +SW +P + +QGY ++
Sbjct: 1 GSSGSSG---SHDSRLTAGVPDTPTRLVFSALGPTSLRVSWQEPRCERP--LQGYSVEYQ 55
Query: 2025 EVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSV--QIKDP 2082
+ R+N+ A + + + +L+ Y FRV AQ++ G ++ Q+ P
Sbjct: 56 LLNGGELHRLNIPNPAQTSVVVEDLLPNHSYVFRVRAQSQEGWGREREGVITIESQVSGP 115
Query: 2083 MAA 2085
+
Sbjct: 116 SSG 118
Score = 92.5 bits (230), Expect = 4e-22
Identities = 28/123 (22%), Positives = 51/123 (41%), Gaps = 9/123 (7%)
Query: 261 SSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDIS 320
SSGS + G+P P L S + + + W P+ + + Y VE + ++
Sbjct: 2 SSGSSGSHDSRLTAGVPDTP-TRLVFSALGPTSLRVSWQEPRCERP--LQGYSVEYQLLN 58
Query: 321 MPHWICISTT-CHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPS 379
++ T+ +V+ L Y+F V A ++ G G EG+ I++ + S
Sbjct: 59 GGELHRLNIPNPAQTSVVVEDLLPNHSYVFRVRAQSQEGWGREREGVITIES-----QVS 113
Query: 380 PPG 382
P
Sbjct: 114 GPS 116
Score = 92.5 bits (230), Expect = 4e-22
Identities = 28/123 (22%), Positives = 51/123 (41%), Gaps = 9/123 (7%)
Query: 1868 SSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDIS 1927
SSGS + G+P P L S + + + W P+ + + Y VE + ++
Sbjct: 2 SSGSSGSHDSRLTAGVPDTP-TRLVFSALGPTSLRVSWQEPRCERP--LQGYSVEYQLLN 58
Query: 1928 MPHWICISTT-CHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPS 1986
++ T+ +V+ L Y+F V A ++ G G EG+ I++ + S
Sbjct: 59 GGELHRLNIPNPAQTSVVVEDLLPNHSYVFRVRAQSQEGWGREREGVITIES-----QVS 113
Query: 1987 PPG 1989
P
Sbjct: 114 GPS 116
Score = 91.7 bits (228), Expect = 1e-21
Identities = 31/122 (25%), Positives = 45/122 (36%), Gaps = 9/122 (7%)
Query: 1217 GSDSASCKVYVVDKPSPPQGPLDVSDITPESCSLSWKPPLDDGGSPITNYVVEKYESATG 1276
GS + P P + S + P S +SW+ P + P+ Y VE G
Sbjct: 4 GSSGSHDSRLTAGVPDTPTRLV-FSALGPTSLRVSWQEPRCER--PLQGYSVEYQLLNGG 60
Query: 1277 FWSKLS-SFVRSPAYDVFGLETNRQYRFRVRAENQYGVSEPLELDNSITAKFPFTVPDPP 1335
+L+ + V L N Y FRVRA++Q G E IT + + P
Sbjct: 61 ELHRLNIPNPAQTSVVVEDLLPNHSYVFRVRAQSQEGWGRERE--GVITIE---SQVSGP 115
Query: 1336 GQ 1337
Sbjct: 116 SS 117
Score = 89.8 bits (223), Expect = 4e-21
Identities = 27/136 (19%), Positives = 45/136 (33%), Gaps = 34/136 (25%)
Query: 991 DPIKAKHPFDVPGAPGAPKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIK 1050
++ VP P S+ + W +PR + P+Q Y VE +L++ + +
Sbjct: 7 GSHDSRLTAGVPDTPTRLVFSALGPTSLRVSWQEPRCER--PLQGYSVEYQLLNGGELHR 64
Query: 1051 ASMAHIPDTSLKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCA 1110
++ + TS+ V L+ NH Y FRV A
Sbjct: 65 LNIPNPAQTSV--------------------------------VVEDLLPNHSYVFRVRA 92
Query: 1111 VNAAGQGPWSSSSDII 1126
+ G G I
Sbjct: 93 QSQEGWGREREGVITI 108
Score = 88.6 bits (220), Expect = 1e-20
Identities = 24/98 (24%), Positives = 38/98 (38%), Gaps = 4/98 (4%)
Query: 668 DRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSWIRV--GNTRFT 725
PD P +G SL + W+ P + + Y VE + R+ N T
Sbjct: 16 GVPDTPTRLVFSALGPTSLRVSWQEPRCERP--LQGYSVEYQLLNGGELHRLNIPNPAQT 73
Query: 726 TMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTK 763
++ + L P H Y FRV A++ G I ++
Sbjct: 74 SVVVEDLLPNHSYVFRVRAQSQEGWGREREGVITIESQ 111
Score = 86.7 bits (215), Expect = 5e-20
Identities = 24/111 (21%), Positives = 40/111 (36%), Gaps = 8/111 (7%)
Query: 898 VLDRPHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTKVSSY-VT 956
P P L SL + W PR + Y VE + N +++
Sbjct: 14 TAGVPDTPTRLVFSALGPTSLRVSWQEPRCER--PLQGYSVEYQLLNGGELHRLNIPNPA 71
Query: 957 TPFVRVRNLAIGSTYEFRVMAENQYGLSKPALTIDPIKAKHPFDVPGAPGA 1007
V V +L +Y FRV A++Q G + + I+++ P +
Sbjct: 72 QTSVVVEDLLPNHSYVFRVRAQSQEGWGREREGVITIESQ-----VSGPSS 117
Score = 60.1 bits (146), Expect = 9e-11
Identities = 13/53 (24%), Positives = 23/53 (43%)
Query: 22 YIIERREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPS 74
Y +E + + G + N N + S V +L+ + Y FR+ A + G
Sbjct: 50 YSVEYQLLNGGELHRLNIPNPAQTSVVVEDLLPNHSYVFRVRAQSQEGWGRER 102
Score = 59.7 bits (145), Expect = 2e-10
Identities = 20/123 (16%), Positives = 36/123 (29%), Gaps = 47/123 (38%)
Query: 1559 VDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEG 1618
S+ + W +PR + P+Q Y VE +L++ + +
Sbjct: 27 SALGPTSLRVSWQEPRCER--PLQGYSVEYQLLNGGELHR-------------------- 64
Query: 1619 KSIGSERGSTAQFLEREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKS 1678
N N + S V +L+ + Y FR+ A + G
Sbjct: 65 -------------------------LNIPNPAQTSVVVEDLLPNHSYVFRVRAQSQEGWG 99
Query: 1679 EPS 1681
Sbjct: 100 RER 102
Score = 45.5 bits (108), Expect = 1e-05
Identities = 23/111 (20%), Positives = 40/111 (36%), Gaps = 13/111 (11%)
Query: 1322 SITAKFPFTVPDPPGQPQIVDWDTNNATLMWDRPRTDGGSKIQGYKMLLKTPTGELPTTI 1381
S ++ VPD P + + + W PR + +QGY +
Sbjct: 8 SHDSRLTAGVPDTPTRLVFSALGPTSLRVSWQEPRCERP--LQGYS-VEYQLLNGGELHR 64
Query: 1382 WSKIRPTSSTVYCKDTTMNSS--------NSE-PGKQSGPVI-VEEQPNKP 1422
+ P ++V +D N S + E G++ VI +E Q + P
Sbjct: 65 LNIPNPAQTSVVVEDLLPNHSYVFRVRAQSQEGWGREREGVITIESQVSGP 115
>3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin
type III domain, alternative cell membrane, disulfide
bond; 1.90A {Homo sapiens} PDB: 3l5j_A
Length = 290
Score = 112 bits (281), Expect = 6e-27
Identities = 46/221 (20%), Positives = 76/221 (34%), Gaps = 14/221 (6%)
Query: 253 DYTVNLS--NSSGSVSGTFTINITGLPGPPIGPLDV--SEITKHTCTLHWNPPKYD-GGL 307
Y L+ N G S + I P+ + + + W P+
Sbjct: 73 RYLATLTVRNLVGK-SDAAVLTIPACDFQATHPVMDLKAFPKDNMLWVEWTTPRESVKKY 131
Query: 308 KVTHYVVERRDISMPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGIN 367
+ V+ + + W T H T++ L E + YL V V +G G P
Sbjct: 132 ILEWCVLSDKAPCITDWQQEDGTVH-RTYLRGNLAESKCYLITVTPVYADGPGSP----E 186
Query: 368 PIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDK-PLDDGGSRIQGYWIDKHEVGSDAWQR 426
IKA PS +VG + L WD+ P+D I+ Y I + +
Sbjct: 187 SIKAYLKQAPPSKGPTVRTKKVGKNEAVLEWDQLPVDVQNGFIRNYTIFYRTIIGN-ETA 245
Query: 427 VNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSAS 467
VNV + ++ + +L Y R+ A + G +
Sbjct: 246 VNVDS-SHTEYTLSSLTSDTLYMVRMAAYTDEGGKDGPEFT 285
Score = 112 bits (281), Expect = 6e-27
Identities = 46/221 (20%), Positives = 76/221 (34%), Gaps = 14/221 (6%)
Query: 1860 DYTVNLS--NSSGSVSGTFTINITGLPGPPIGPLDV--SEITKHTCTLHWNPPKYD-GGL 1914
Y L+ N G S + I P+ + + + W P+
Sbjct: 73 RYLATLTVRNLVGK-SDAAVLTIPACDFQATHPVMDLKAFPKDNMLWVEWTTPRESVKKY 131
Query: 1915 KVTHYVVERRDISMPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGIN 1974
+ V+ + + W T H T++ L E + YL V V +G G P
Sbjct: 132 ILEWCVLSDKAPCITDWQQEDGTVH-RTYLRGNLAESKCYLITVTPVYADGPGSP----E 186
Query: 1975 PIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDK-PLDDGGSRIQGYWIDKHEVGSDAWQR 2033
IKA PS +VG + L WD+ P+D I+ Y I + +
Sbjct: 187 SIKAYLKQAPPSKGPTVRTKKVGKNEAVLEWDQLPVDVQNGFIRNYTIFYRTIIGN-ETA 245
Query: 2034 VNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSAS 2074
VNV + ++ + +L Y R+ A + G +
Sbjct: 246 VNVDS-SHTEYTLSSLTSDTLYMVRMAAYTDEGGKDGPEFT 285
Score = 95.3 bits (237), Expect = 3e-21
Identities = 41/228 (17%), Positives = 65/228 (28%), Gaps = 50/228 (21%)
Query: 902 PHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVE-----KKDYNSTVWTKVSSYVT 956
HP +L A + L + WT PR+ + Y++E K T W + V
Sbjct: 102 THPVMDLKA-FPKDNMLWVEWTTPRE----SVKKYILEWCVLSDKAPCITDWQQEDGTVH 156
Query: 957 TPFVRVRNLAIGSTYEFRVMAENQYGLSKPALTIDPIKAKHPFDVPGAPGAPKGVDSTED 1016
NLA Y V G P IKA P + ++
Sbjct: 157 R-TYLRGNLAESKCYLITVTPVYADGPGSPE----SIKAYLKQAPPSKGPTVRTKKVGKN 211
Query: 1017 SISLVWSK-PRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEGKSIGS 1075
L W + P I+ Y + R I ++ ++ + +Y L
Sbjct: 212 EAVLEWDQLPVDVQNGFIRNYTIFYRTIIGNETAV----NVDSSHTEYTL---------- 257
Query: 1076 ERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPWSSSS 1123
+SL + Y R+ A G +
Sbjct: 258 --------------------SSLTSDTLYMVRMAAYTDEGGKDGPEFT 285
Score = 94.9 bits (236), Expect = 4e-21
Identities = 35/223 (15%), Positives = 61/223 (27%), Gaps = 43/223 (19%)
Query: 917 SLTLYWTP-PRDNGGSEITNYVVEKKDYNSTVWTKVSSYVTTPFVRVRNLAIGSTYEFRV 975
++ L W P +I +Y V + S + T ++ Y +
Sbjct: 24 TVQLVWKTLPPFEANGKILDYEVTLTRWKSHLQN-----YTVNATKLTVNLTNDRYLATL 78
Query: 976 MAENQYGLSKPALTIDPIKAKHPFDVPGAPGAPKGVDSTEDSISLVWSKPRHDGGSPIQR 1035
N G S A + P ++ + + W+ PR +++
Sbjct: 79 TVRNLVGKSDAA----VLTIPACDFQATHPVMDLKAFPKDNMLWVEWTTPR----ESVKK 130
Query: 1036 YIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRV 1095
YI+E ++SD T + L
Sbjct: 131 YILEWCVLSDKAPCITDWQQEDGTVHRTYL-----------------------------R 161
Query: 1096 TSLIENHEYEFRVCAVNAAGQGPWSSSSDIIMCCAPPCAPKIT 1138
+L E+ Y V V A G G S + P P +
Sbjct: 162 GNLAESKCYLITVTPVYADGPGSPESIKAYLKQAPPSKGPTVR 204
Score = 92.9 bits (231), Expect = 2e-20
Identities = 33/229 (14%), Positives = 61/229 (26%), Gaps = 30/229 (13%)
Query: 279 PPIGPLDV-------SEITKHTCTLHWNP-PKYDGGLKVTHYVVERRDISMPHWICISTT 330
P T L W P ++ K+ Y V + T
Sbjct: 3 RPSKAPSFWYKIDPSHTQGYRTVQLVWKTLPPFEANGKILDYEVTLTRWKSHLQ---NYT 59
Query: 331 CHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVG 390
+ T V YL + N G + + + + P + +
Sbjct: 60 VNATKLTV--NLTNDRYLATLTVRNLVGKSDA----AVLTIPACDFQATHPVMDLKAFPK 113
Query: 391 GDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDA-----WQRVNVAICAPSQINIPNLIEG 445
+ + + W P + ++ Y ++ + A WQ+ + + NL E
Sbjct: 114 DNMLWVEWTTPRES----VKKYILEWCVLSDKAPCITDWQQEDGTV--HRTYLRGNLAES 167
Query: 446 RQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQ 494
+ Y V G P S ++ P P + N
Sbjct: 168 KCYLITVTPVYADGPGSPESIKAYLKQAPPSK--GPTVRTKKVGKNEAV 214
Score = 92.9 bits (231), Expect = 2e-20
Identities = 33/229 (14%), Positives = 61/229 (26%), Gaps = 30/229 (13%)
Query: 1886 PPIGPLDV-------SEITKHTCTLHWNP-PKYDGGLKVTHYVVERRDISMPHWICISTT 1937
P T L W P ++ K+ Y V + T
Sbjct: 3 RPSKAPSFWYKIDPSHTQGYRTVQLVWKTLPPFEANGKILDYEVTLTRWKSHLQ---NYT 59
Query: 1938 CHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVG 1997
+ T V YL + N G + + + + P + +
Sbjct: 60 VNATKLTV--NLTNDRYLATLTVRNLVGKSDA----AVLTIPACDFQATHPVMDLKAFPK 113
Query: 1998 GDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDA-----WQRVNVAICAPSQINIPNLIEG 2052
+ + + W P + ++ Y ++ + A WQ+ + + NL E
Sbjct: 114 DNMLWVEWTTPRES----VKKYILEWCVLSDKAPCITDWQQEDGTV--HRTYLRGNLAES 167
Query: 2053 RQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQ 2101
+ Y V G P S ++ P P + N
Sbjct: 168 KCYLITVTPVYADGPGSPESIKAYLKQAPPSK--GPTVRTKKVGKNEAV 214
Score = 81.4 bits (201), Expect = 2e-16
Identities = 50/333 (15%), Positives = 94/333 (28%), Gaps = 69/333 (20%)
Query: 1000 DVP-GAPGAPKGVDSTED----SISLVWSK-PRHDGGSPIQRYIVEKRLISDDKWIKASM 1053
D P AP +D + ++ LVW P + I Y V
Sbjct: 2 DRPSKAPSFWYKIDPSHTQGYRTVQLVWKTLPPFEANGKILDYEVT-------------- 47
Query: 1054 AHIPDTSLKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNA 1113
+ + + + +T + N Y + N
Sbjct: 48 ------------LTRWKSHLQNYTVNATK------------LTVNLTNDRYLATLTVRNL 83
Query: 1114 AGQGPWSSSSDIIMCCAPPCAPKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPI---- 1169
G+ + + I C P + D+ + + V ++ P+ +
Sbjct: 84 VGKSDAAVLT-IPACDFQATHP-------VMDLKAFPKDN-MLWVEWT-TPRESVKKYIL 133
Query: 1170 -WTVNGDEVSPDGRIKFETSENQTIYRNKSAKRATDSGSYTIQL--VNTVGSDSASCKVY 1226
W V D+ + E Y + + Y I + V G + +
Sbjct: 134 EWCVLSDKAPCITDWQQEDGTVHRTYLRGNLAESK---CYLITVTPVYADG-PGSPESIK 189
Query: 1227 VVDKPSPPQGP--LDVSDITPESCSLSWKP-PLDDGGSPITNYVVEKYESATGFWSKLSS 1283
K +PP + + L W P+D I NY + Y + G + ++
Sbjct: 190 AYLKQAPPSKGPTVRTKKVGKNEAVLEWDQLPVDVQNGFIRNYTIF-YRTIIGNETAVNV 248
Query: 1284 FVRSPAYDVFGLETNRQYRFRVRAENQYGVSEP 1316
Y + L ++ Y R+ A G +
Sbjct: 249 DSSHTEYTLSSLTSDTLYMVRMAAYTDEGGKDG 281
Score = 79.1 bits (195), Expect = 1e-15
Identities = 31/182 (17%), Positives = 48/182 (26%), Gaps = 16/182 (8%)
Query: 1203 TDSGSYTIQL--VNTVGSDSASCKVYVVDKPSPPQGPLDVS-DITPESCSLSWKPPLDDG 1259
+ Y L N VG A+ +D+ + W P +
Sbjct: 69 LTNDRYLATLTVRNLVGKSDAAVLTIPACDFQATHPVMDLKAFPKDNMLWVEWTTPRE-- 126
Query: 1260 GSPITNYVVEKYESATGFWSKLSSFVRSP----AYDVFGLETNRQYRFRVRAENQYGVSE 1315
+ Y++E + Y L ++ Y V G
Sbjct: 127 --SVKKYILEWCVLSDKAPCITDWQQEDGTVHRTYLRGNLAESKCYLITVTPVYADGPGS 184
Query: 1316 PLELDNSITAKFPFTVPDPPGQPQIVDWDTNNATLMWDRPRTDGG-SKIQGYKMLLKTPT 1374
P SI A P + N A L WD+ D I+ Y + +T
Sbjct: 185 P----ESIKAYLKQAPPSKGPTVRTKKVGKNEAVLEWDQLPVDVQNGFIRNYTIFYRTII 240
Query: 1375 GE 1376
G
Sbjct: 241 GN 242
Score = 73.7 bits (181), Expect = 7e-14
Identities = 26/169 (15%), Positives = 39/169 (23%), Gaps = 20/169 (11%)
Query: 1233 PPQGPLDV-------SDITPESCSLSWKP-PLDDGGSPITNYVVEKYESATGFWSKLSSF 1284
P + L WK P + I +Y V + +
Sbjct: 3 RPSKAPSFWYKIDPSHTQGYRTVQLVWKTLPPFEANGKILDYEVTLTRWKSHLQN----- 57
Query: 1285 VRSPAYDVFGLETNRQYRFRVRAENQYGVSEPLELDNSITAKFPFTVPDPPGQPQIVDWD 1344
A + TN +Y + N G S+ +T P
Sbjct: 58 YTVNATKLTVNLTNDRYLATLTVRNLVGKSDA----AVLTIPACDFQATHPVMDLKAFPK 113
Query: 1345 TNNATLMWDRPRTDGGSKIQGYKMLLKTPTGELPTTIWSKIRPTSSTVY 1393
N + W PR I + T W + T Y
Sbjct: 114 DNMLWVEWTTPRESVKKYILEWC---VLSDKAPCITDWQQEDGTVHRTY 159
Score = 67.5 bits (165), Expect = 6e-12
Identities = 17/118 (14%), Positives = 30/118 (25%), Gaps = 11/118 (9%)
Query: 647 YRVVAENDLGM--DSAIVKIQISDRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNY 704
+ N +G + + + P + L + W P ++ Y
Sbjct: 76 ATLTVRNLVGKSDAAVLTIPACDFQATHPVMDLKAFPKDNMLWVEWTTPR----ESVKKY 131
Query: 705 IVEKREHPMS-----SWIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTS 757
I+E W + T T L+ Y V G P +
Sbjct: 132 ILEWCVLSDKAPCITDWQQEDGTVHRTYLRGNLAESKCYLITVTPVYADGPGSPESIK 189
Score = 66.8 bits (163), Expect = 1e-11
Identities = 26/171 (15%), Positives = 46/171 (26%), Gaps = 17/171 (9%)
Query: 601 TGYPKPKITWYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAPY-----RVVAENDL 655
Y + W ++ + E H + A V
Sbjct: 129 KKY---ILEWCVLSDKAPCITDWQQEDGTVHRTYLRGN-----LAESKCYLITVTPVYAD 180
Query: 656 GM-DSAIVKIQIS-DRPDPPQFPTVEDIGHDSLALVWRA-PIWDGGSNITNYIVEKREHP 712
G +K + P + +G + L W P+ I NY + R
Sbjct: 181 GPGSPESIKAYLKQAPPSKGPTVRTKKVGKNEAVLEWDQLPVDVQNGFIRNYTIFYRTII 240
Query: 713 MSSWIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTK 763
+ ++ T ++ L+ Y R+ A G D + T K
Sbjct: 241 GNETAVNVDSSHTEYTLSSLTSDTLYMVRMAAYTDEGGKDGPEFT-FTTPK 290
Score = 55.2 bits (133), Expect = 9e-08
Identities = 20/96 (20%), Positives = 34/96 (35%), Gaps = 10/96 (10%)
Query: 668 DRPD-PPQFP----TVEDIGHDSLALVWRA-PIWDGGSNITNYIVEKREHPMSSWIRVGN 721
DRP P F G+ ++ LVW+ P ++ I +Y V N
Sbjct: 2 DRPSKAPSFWYKIDPSHTQGYRTVQLVWKTLPPFEANGKILDYEVTLTRWKSHLQ----N 57
Query: 722 TRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTS 757
+T +Y + N+ G+SD + +
Sbjct: 58 YTVNATKLTVNLTNDRYLATLTVRNLVGKSDAAVLT 93
Score = 53.3 bits (128), Expect = 3e-07
Identities = 14/84 (16%), Positives = 24/84 (28%), Gaps = 2/84 (2%)
Query: 900 DRPHPPENLHADEFAGDSLTLYWTP-PRDNGGSEITNYVVEKKDYNSTVWTKVSSYVTTP 958
P + + + L W P D I NY + + T
Sbjct: 195 APPSKGPTVRTKKVGKNEAVLEWDQLPVDVQNGFIRNYTIFYRTIIGNETAVNVDSSHTE 254
Query: 959 FVRVRNLAIGSTYEFRVMAENQYG 982
+ + +L + Y R+ A G
Sbjct: 255 YT-LSSLTSDTLYMVRMAAYTDEG 277
Score = 35.6 bits (82), Expect = 0.16
Identities = 11/58 (18%), Positives = 22/58 (37%), Gaps = 6/58 (10%)
Query: 22 YIIERREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPSICTTP 79
Y + + +Y V +V + + Y + N +GKS+ ++ T P
Sbjct: 44 YEVTLTRWKSHLQ----NYTVNATKLTVN--LTNDRYLATLTVRNLVGKSDAAVLTIP 95
Score = 34.4 bits (79), Expect = 0.36
Identities = 18/123 (14%), Positives = 31/123 (25%), Gaps = 46/123 (37%)
Query: 1559 VDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEG 1618
++ + + W+ PR +++YI+E ++SD T + L
Sbjct: 110 AFPKDNMLWVEWTTPR----ESVKKYILEWCVLSDKAPCITDWQQEDGTVHRTYL----- 160
Query: 1619 KSIGSERGSTAQFLEREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKS 1678
NL E Y + V A G
Sbjct: 161 -------------------------------------RGNLAESKCYLITVTPVYADGPG 183
Query: 1679 EPS 1681
P
Sbjct: 184 SPE 186
Score = 34.0 bits (78), Expect = 0.44
Identities = 12/60 (20%), Positives = 21/60 (35%), Gaps = 4/60 (6%)
Query: 22 YIIERREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPSICT--TP 79
Y I R + G + + +++ +L Y R+ A G + T TP
Sbjct: 232 YTIFYRTIIG--NETAVNVDSSHTEYTLSSLTSDTLYMVRMAAYTDEGGKDGPEFTFTTP 289
Score = 33.2 bits (76), Expect = 0.85
Identities = 7/23 (30%), Positives = 12/23 (52%)
Query: 1664 DYEFRIIAVNAIGKSEPSICTTP 1686
Y + N +GKS+ ++ T P
Sbjct: 73 RYLATLTVRNLVGKSDAAVLTIP 95
Score = 32.9 bits (75), Expect = 1.2
Identities = 12/58 (20%), Positives = 19/58 (32%), Gaps = 7/58 (12%)
Query: 22 YIIERREVGGAI-----WLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPS 74
YI+E + W + + ++ NL E Y + V A G P
Sbjct: 131 YILEWCVLSDKAPCITDWQQEDGTVHR--TYLRGNLAESKCYLITVTPVYADGPGSPE 186
Score = 31.3 bits (71), Expect = 3.7
Identities = 8/42 (19%), Positives = 15/42 (35%), Gaps = 2/42 (4%)
Query: 1647 YNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPSICT--TP 1686
+ +++ +L Y R+ A G + T TP
Sbjct: 248 VDSSHTEYTLSSLTSDTLYMVRMAAYTDEGGKDGPEFTFTTP 289
>2kkq_A Myotilin; unknown function, actin-binding, cell membrane,
cytoplasm, cytoskeleton, disease mutation,
immunoglobulin domain; NMR {Homo sapiens}
Length = 116
Score = 105 bits (265), Expect = 8e-27
Identities = 24/103 (23%), Positives = 45/103 (43%), Gaps = 2/103 (1%)
Query: 479 KAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDT--Y 536
+AP I ++ ++ + + +C I+ P P + W + + + + + +T
Sbjct: 14 RAPMFIYKPQSKKVLEGDSVKLECQISAIPPPKLFWKRNNEMVQFNTDRISLYQDNTGRV 73
Query: 537 TLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVP 579
TL+I V DA Y AVN+ GV + L + P +P
Sbjct: 74 TLLIKDVNKKDAGWYTVSAVNEAGVTTCNTRLDVTARPNQTLP 116
Score = 105 bits (265), Expect = 8e-27
Identities = 24/103 (23%), Positives = 45/103 (43%), Gaps = 2/103 (1%)
Query: 2086 KAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDT--Y 2143
+AP I ++ ++ + + +C I+ P P + W + + + + + +T
Sbjct: 14 RAPMFIYKPQSKKVLEGDSVKLECQISAIPPPKLFWKRNNEMVQFNTDRISLYQDNTGRV 73
Query: 2144 TLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVP 2186
TL+I V DA Y AVN+ GV + L + P +P
Sbjct: 74 TLLIKDVNKKDAGWYTVSAVNEAGVTTCNTRLDVTARPNQTLP 116
Score = 97.9 bits (244), Expect = 6e-24
Identities = 25/100 (25%), Positives = 37/100 (37%), Gaps = 2/100 (2%)
Query: 89 EKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYR--VETAGGVF 146
P FI + V G + L+C+ + P PK W RN + + G
Sbjct: 14 RAPMFIYKPQSKKVLEGDSVKLECQISAIPPPKLFWKRNNEMVQFNTDRISLYQDNTGRV 73
Query: 147 RLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRI 186
L +V D G YT A N G ++R+ + P
Sbjct: 74 TLLIKDVNKKDAGWYTVSAVNEAGVTTCNTRLDVTARPNQ 113
Score = 97.9 bits (244), Expect = 6e-24
Identities = 25/100 (25%), Positives = 37/100 (37%), Gaps = 2/100 (2%)
Query: 1696 EKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYR--VETAGGVF 1753
P FI + V G + L+C+ + P PK W RN + + G
Sbjct: 14 RAPMFIYKPQSKKVLEGDSVKLECQISAIPPPKLFWKRNNEMVQFNTDRISLYQDNTGRV 73
Query: 1754 RLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRI 1793
L +V D G YT A N G ++R+ + P
Sbjct: 74 TLLIKDVNKKDAGWYTVSAVNEAGVTTCNTRLDVTARPNQ 113
Score = 71.7 bits (176), Expect = 8e-15
Identities = 25/117 (21%), Positives = 48/117 (41%), Gaps = 5/117 (4%)
Query: 560 GVKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVI-E 618
G AP F P+ + G++V ++ + P PK+ W R+NE++
Sbjct: 2 GHHHHHHSHEHKRAPMFIYKPQ--SKKVLE-GDSVKLECQISAIPPPKLFWKRNNEMVQF 58
Query: 619 SGGHFHVETSER-HAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQISDRPDPPQ 674
+ + L I+D + D Y V A N+ G+ + ++ ++ RP+
Sbjct: 59 NTDRISLYQDNTGRVTLLIKDVNKKDAGWYTVSAVNEAGVTTCNTRLDVTARPNQTL 115
Score = 64.3 bits (157), Expect = 3e-12
Identities = 21/108 (19%), Positives = 35/108 (32%), Gaps = 7/108 (6%)
Query: 1131 PPCAPKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSEN 1190
AP + VL G+ + S P P W N + V + +N
Sbjct: 12 HKRAPMFIYKP--QSKKVLEGDSVKLECQISAIPPPKLFWKRNNEMVQFNTDRISLYQDN 69
Query: 1191 QTIYR---NKSAKRATDSGSYTIQLVNTVGSDSASCKVYVVDKPSPPQ 1235
D+G YT+ VN G + + ++ V +P+
Sbjct: 70 TGRVTLLIKDV--NKKDAGWYTVSAVNEAGVTTCNTRLDVTARPNQTL 115
Score = 60.5 bits (147), Expect = 6e-11
Identities = 26/111 (23%), Positives = 51/111 (45%), Gaps = 2/111 (1%)
Query: 169 VGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDD 228
+G H + P P + + EGD+ K++ + P ++ +N +VQ +
Sbjct: 1 MGHHHHHHSHEHKRAPMFIYKPQSKKVLEGDSVKLECQISAIPPPKLFWKRNNEMVQFNT 60
Query: 229 RFKFTVLDD--YIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLP 277
D+ + + IK++ K+DAG YTV+ N +G + +++T P
Sbjct: 61 DRISLYQDNTGRVTLLIKDVNKKDAGWYTVSAVNEAGVTTCNTRLDVTARP 111
Score = 60.5 bits (147), Expect = 6e-11
Identities = 26/111 (23%), Positives = 51/111 (45%), Gaps = 2/111 (1%)
Query: 1776 VGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDD 1835
+G H + P P + + EGD+ K++ + P ++ +N +VQ +
Sbjct: 1 MGHHHHHHSHEHKRAPMFIYKPQSKKVLEGDSVKLECQISAIPPPKLFWKRNNEMVQFNT 60
Query: 1836 RFKFTVLDD--YIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLP 1884
D+ + + IK++ K+DAG YTV+ N +G + +++T P
Sbjct: 61 DRISLYQDNTGRVTLLIKDVNKKDAGWYTVSAVNEAGVTTCNTRLDVTARP 111
Score = 49.3 bits (118), Expect = 5e-07
Identities = 19/80 (23%), Positives = 33/80 (41%), Gaps = 1/80 (1%)
Query: 1430 RDITVKAGEDFSIHVPFMAFPQPAAFWFANDSIIDDSDTRVH-KQLTMNSASLVVKNSQR 1488
+ V G+ + A P P FW N+ ++ + R+ Q +L++K+ +
Sbjct: 23 QSKKVLEGDSVKLECQISAIPPPKLFWKRNNEMVQFNTDRISLYQDNTGRVTLLIKDVNK 82
Query: 1489 SDGGQYRLQLKNPAGFDTAT 1508
D G Y + N AG T
Sbjct: 83 KDAGWYTVSAVNEAGVTTCN 102
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta
trefoil, IG domain, growth factor/growth factor receptor
complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Length = 334
Score = 112 bits (282), Expect = 1e-26
Identities = 48/212 (22%), Positives = 69/212 (32%), Gaps = 23/212 (10%)
Query: 89 EKPDFIVP----LKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGAR-YRVETAG 143
P + P K L VP + +C A G P P WL+NGRE R ++
Sbjct: 118 GAPYWTRPERMDKKLLAVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHRIGGIKLRH 177
Query: 144 GVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKI-----GTPPRIDRMPNALYIPEG 198
+ L V D G+YTC N G + + + P +P G
Sbjct: 178 QQWSLVMESVVPSDRGNYTCVVENKFGSIRQTYTLDVLERSPHRPILQAGLPANQTAVLG 237
Query: 199 DNTKVKIFYAGDQPMEVSLTK----NGRVVQSDDRFKFTVLDDYIIIF---------IKE 245
+ + D + K NG V D TVL +
Sbjct: 238 SDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKTAGANTTDKELEVLSLHN 297
Query: 246 IRKEDAGDYTVNLSNSSGSVSGTFTINITGLP 277
+ EDAG+YT NS G + + +
Sbjct: 298 VTFEDAGEYTCLAGNSIGFSHHSAWLVVLPAE 329
Score = 112 bits (282), Expect = 1e-26
Identities = 48/212 (22%), Positives = 69/212 (32%), Gaps = 23/212 (10%)
Query: 1696 EKPDFIVP----LKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGAR-YRVETAG 1750
P + P K L VP + +C A G P P WL+NGRE R ++
Sbjct: 118 GAPYWTRPERMDKKLLAVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHRIGGIKLRH 177
Query: 1751 GVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKI-----GTPPRIDRMPNALYIPEG 1805
+ L V D G+YTC N G + + + P +P G
Sbjct: 178 QQWSLVMESVVPSDRGNYTCVVENKFGSIRQTYTLDVLERSPHRPILQAGLPANQTAVLG 237
Query: 1806 DNTKVKIFYAGDQPMEVSLTK----NGRVVQSDDRFKFTVLDDYIIIF---------IKE 1852
+ + D + K NG V D TVL +
Sbjct: 238 SDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKTAGANTTDKELEVLSLHN 297
Query: 1853 IRKEDAGDYTVNLSNSSGSVSGTFTINITGLP 1884
+ EDAG+YT NS G + + +
Sbjct: 298 VTFEDAGEYTCLAGNSIGFSHHSAWLVVLPAE 329
Score = 110 bits (275), Expect = 7e-26
Identities = 47/250 (18%), Positives = 76/250 (30%), Gaps = 22/250 (8%)
Query: 444 EGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQN----HNAQ 499
R +A S + AP P R + + +
Sbjct: 83 TQRVLCHFSVRVTDAPSSGDDEDGEDEAEDTGVDTGAPYWTRPERMDKKLLAVPAANTVR 142
Query: 500 FQCTITGCPKPTISWLKGSREITPSARHHIFA-EGDTYTLIINSVYGVDADEYVCRAVNK 558
F+C G P P+ISWLK RE R ++L++ SV D Y C NK
Sbjct: 143 FRCPAAGNPTPSISWLKNGREFRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTCVVENK 202
Query: 559 GGVKSTKAELIIMTAPKFNVPPRFRDT---AYFDKGENVVVKIPFTGYPKPKITWYRDNE 615
G L ++ P G +V +P I W + E
Sbjct: 203 FGSIRQTYTLDVLERSPH-RPILQAGLPANQTAVLGSDVEFHCKVYSDAQPHIQWLKHVE 261
Query: 616 V----IESGGHFHVE---------TSERHAILTIRDASNVDTAPYRVVAENDLGMDSAIV 662
V + G +V T + +L++ + + D Y +A N +G
Sbjct: 262 VNGSKVGPDGTPYVTVLKTAGANTTDKELEVLSLHNVTFEDAGEYTCLAGNSIGFSHHSA 321
Query: 663 KIQISDRPDP 672
+ + +
Sbjct: 322 WLVVLPAEEE 331
Score = 106 bits (266), Expect = 1e-24
Identities = 45/318 (14%), Positives = 80/318 (25%), Gaps = 47/318 (14%)
Query: 477 AAKAPEIIV-PLRNANAIQNHNAQFQCTIT-GCPKPTISWLKGSREITPSARHHIFAEGD 534
AA+ P + C G P W+K + PS R +
Sbjct: 4 AAEVPGPEPGQQEQLVFGSGDAVELSCPPPGGGPMGPTVWVKDGTGLVPSERVLV----G 59
Query: 535 TYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIM---------------TAPKFNVP 579
L + + D+ Y CR V + +
Sbjct: 60 PQRLQVLNASHEDSGAYSCRQRLTQRVLCHFSVRVTDAPSSGDDEDGEDEAEDTGVDTGA 119
Query: 580 PRFRDTAYFDK-------GENVVVKIPFTGYPKPKITWYRDNEVIE-SGGHFHVETSERH 631
P + DK V + P G P P I+W ++ ++ +
Sbjct: 120 PYWTRPERMDKKLLAVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHRIGGIKLRHQQ 179
Query: 632 AILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQISDRPDPPQFPTVE-------DIGHD 684
L + D Y V EN G + + +R +G D
Sbjct: 180 WSLVMESVVPSDRGNYTCVVENKFGSIRQTYTLDVLERSPHRPILQAGLPANQTAVLGSD 239
Query: 685 -----------SLALVWRAPIWDGGSNITNYIVEKREHPMSSWIRVGNTRFTTMAITGLS 733
+ W + GS + ++ + +++ ++
Sbjct: 240 VEFHCKVYSDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKTAGANTTDKELEVLSLHNVT 299
Query: 734 PGHQYEFRVYAENVYGRS 751
E+ A N G S
Sbjct: 300 FEDAGEYTCLAGNSIGFS 317
Score = 102 bits (254), Expect = 4e-23
Identities = 40/222 (18%), Positives = 71/222 (31%), Gaps = 32/222 (14%)
Query: 87 GGEKPDFIV-PLKDLVVPLGKLLTLQCEAT-GTPVPKCRWLRNGREISSGARYRVETAGG 144
E P + LV G + L C G P+ W+++G + R V
Sbjct: 4 AAEVPGPEPGQQEQLVFGSGDAVELSCPPPGGGPMGPTVWVKDGTGLVPSERVLVGPQ-- 61
Query: 145 VFRLHFNEVTDVDNGDYTCEAYNSVGFAHT---------------------SSRVKIGTP 183
RL + D+G Y+C +
Sbjct: 62 --RLQVLNASHEDSGAYSCRQRLTQRVLCHFSVRVTDAPSSGDDEDGEDEAEDTGVDTGA 119
Query: 184 PRIDRMPNA----LYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFK-FTVLDDY 238
P R L +P + + + AG+ +S KNGR + + R +
Sbjct: 120 PYWTRPERMDKKLLAVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHRIGGIKLRHQQ 179
Query: 239 IIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPP 280
+ ++ + D G+YT + N GS+ T+T+++
Sbjct: 180 WSLVMESVVPSDRGNYTCVVENKFGSIRQTYTLDVLERSPHR 221
Score = 102 bits (254), Expect = 4e-23
Identities = 40/222 (18%), Positives = 71/222 (31%), Gaps = 32/222 (14%)
Query: 1694 GGEKPDFIV-PLKDLVVPLGKLLTLQCEAT-GTPVPKCRWLRNGREISSGARYRVETAGG 1751
E P + LV G + L C G P+ W+++G + R V
Sbjct: 4 AAEVPGPEPGQQEQLVFGSGDAVELSCPPPGGGPMGPTVWVKDGTGLVPSERVLVGPQ-- 61
Query: 1752 VFRLHFNEVTDVDNGDYTCEAYNSVGFAHT---------------------SSRVKIGTP 1790
RL + D+G Y+C +
Sbjct: 62 --RLQVLNASHEDSGAYSCRQRLTQRVLCHFSVRVTDAPSSGDDEDGEDEAEDTGVDTGA 119
Query: 1791 PRIDRMPNA----LYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFK-FTVLDDY 1845
P R L +P + + + AG+ +S KNGR + + R +
Sbjct: 120 PYWTRPERMDKKLLAVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHRIGGIKLRHQQ 179
Query: 1846 IIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPP 1887
+ ++ + D G+YT + N GS+ T+T+++
Sbjct: 180 WSLVMESVVPSDRGNYTCVVENKFGSIRQTYTLDVLERSPHR 221
Score = 83.5 bits (206), Expect = 6e-17
Identities = 26/138 (18%), Positives = 52/138 (37%), Gaps = 16/138 (11%)
Query: 454 AQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTIS 513
+N+ G + ++ + + + N A+ + +F C + +P I
Sbjct: 199 VENKFGSI---RQTYTLDVLERSPHRPILQAGLPANQTAVLGSDVEFHCKVYSDAQPHIQ 255
Query: 514 WLKGSR----EITPSARHHI---------FAEGDTYTLIINSVYGVDADEYVCRAVNKGG 560
WLK ++ P ++ + + L +++V DA EY C A N G
Sbjct: 256 WLKHVEVNGSKVGPDGTPYVTVLKTAGANTTDKELEVLSLHNVTFEDAGEYTCLAGNSIG 315
Query: 561 VKSTKAELIIMTAPKFNV 578
A L+++ A + V
Sbjct: 316 FSHHSAWLVVLPAEEELV 333
Score = 83.5 bits (206), Expect = 6e-17
Identities = 26/138 (18%), Positives = 52/138 (37%), Gaps = 16/138 (11%)
Query: 2061 AQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTIS 2120
+N+ G + ++ + + + N A+ + +F C + +P I
Sbjct: 199 VENKFGSI---RQTYTLDVLERSPHRPILQAGLPANQTAVLGSDVEFHCKVYSDAQPHIQ 255
Query: 2121 WLKGSR----EITPSARHHI---------FAEGDTYTLIINSVYGVDADEYVCRAVNKGG 2167
WLK ++ P ++ + + L +++V DA EY C A N G
Sbjct: 256 WLKHVEVNGSKVGPDGTPYVTVLKTAGANTTDKELEVLSLHNVTFEDAGEYTCLAGNSIG 315
Query: 2168 VKSTKAELIIMTAPKFNV 2185
A L+++ A + V
Sbjct: 316 FSHHSAWLVVLPAEEELV 333
Score = 76.2 bits (187), Expect = 2e-14
Identities = 29/135 (21%), Positives = 47/135 (34%), Gaps = 16/135 (11%)
Query: 63 IAVNAIGKSEPSICTTPVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKC 122
+ N G T + + E + LG + C+ P
Sbjct: 198 VVENKFGSIR---QTYTLDVLERSPHRPILQAGLPANQTAVLGSDVEFHCKVYSDAQPHI 254
Query: 123 RWLR----NGREISSGARYRVE---------TAGGVFRLHFNEVTDVDNGDYTCEAYNSV 169
+WL+ NG ++ V T + L + VT D G+YTC A NS+
Sbjct: 255 QWLKHVEVNGSKVGPDGTPYVTVLKTAGANTTDKELEVLSLHNVTFEDAGEYTCLAGNSI 314
Query: 170 GFAHTSSRVKIGTPP 184
GF+H S+ + +
Sbjct: 315 GFSHHSAWLVVLPAE 329
Score = 76.2 bits (187), Expect = 2e-14
Identities = 29/135 (21%), Positives = 47/135 (34%), Gaps = 16/135 (11%)
Query: 1670 IAVNAIGKSEPSICTTPVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKC 1729
+ N G T + + E + LG + C+ P
Sbjct: 198 VVENKFGSIR---QTYTLDVLERSPHRPILQAGLPANQTAVLGSDVEFHCKVYSDAQPHI 254
Query: 1730 RWLR----NGREISSGARYRVE---------TAGGVFRLHFNEVTDVDNGDYTCEAYNSV 1776
+WL+ NG ++ V T + L + VT D G+YTC A NS+
Sbjct: 255 QWLKHVEVNGSKVGPDGTPYVTVLKTAGANTTDKELEVLSLHNVTFEDAGEYTCLAGNSI 314
Query: 1777 GFAHTSSRVKIGTPP 1791
GF+H S+ + +
Sbjct: 315 GFSHHSAWLVVLPAE 329
Score = 73.1 bits (179), Expect = 2e-13
Identities = 31/144 (21%), Positives = 44/144 (30%), Gaps = 6/144 (4%)
Query: 2051 EGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQN----HNAQ 2106
R +A S + AP P R + + +
Sbjct: 83 TQRVLCHFSVRVTDAPSSGDDEDGEDEAEDTGVDTGAPYWTRPERMDKKLLAVPAANTVR 142
Query: 2107 FQCTITGCPKPTISWLKGSREITPSARHHIFA-EGDTYTLIINSVYGVDADEYVCRAVNK 2165
F+C G P P+ISWLK RE R ++L++ SV D Y C NK
Sbjct: 143 FRCPAAGNPTPSISWLKNGREFRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTCVVENK 202
Query: 2166 GGVKSTKAELIIMTAPKFNVPPRF 2189
G L ++ P
Sbjct: 203 FGSIRQTYTLDVLERSPH-RPILQ 225
Score = 62.7 bits (152), Expect = 4e-10
Identities = 19/137 (13%), Positives = 33/137 (24%), Gaps = 21/137 (15%)
Query: 2084 AAKAPEIIV-PLRNANAIQNHNAQFQCTIT-GCPKPTISWLKGSREITPSARHHIFAEGD 2141
AA+ P + C G P W+K + PS R +
Sbjct: 4 AAEVPGPEPGQQEQLVFGSGDAVELSCPPPGGGPMGPTVWVKDGTGLVPSERVLV----G 59
Query: 2142 TYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIM---------------TAPKFNVP 2186
L + + D+ Y CR V + +
Sbjct: 60 PQRLQVLNASHEDSGAYSCRQRLTQRVLCHFSVRVTDAPSSGDDEDGEDEAEDTGVDTGA 119
Query: 2187 PRFRDTAYFESDVVVVV 2203
P + + ++ V
Sbjct: 120 PYWTRPERMDKKLLAVP 136
Score = 59.6 bits (144), Expect = 4e-09
Identities = 25/107 (23%), Positives = 42/107 (39%), Gaps = 10/107 (9%)
Query: 1134 APKIT--SDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQ 1191
AP T + + + V A P +G P P+ W NG E + RI +Q
Sbjct: 119 APYWTRPERMDKKLLAVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHRIGGIKLRHQ 178
Query: 1192 ----TIYRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYVVDKPSPP 1234
+ +S + D G+YT + N GS + + V+++
Sbjct: 179 QWSLVM---ESVVPS-DRGNYTCVVENKFGSIRQTYTLDVLERSPHR 221
Score = 52.7 bits (126), Expect = 7e-07
Identities = 19/100 (19%), Positives = 30/100 (30%), Gaps = 12/100 (12%)
Query: 1144 RDMTVLAGEEFTITVPFSGRPKPTPIWT----VNGDEVSPDGRIKFETSENQTIYRNKSA 1199
+ T + G + +P W VNG +V PDG +
Sbjct: 230 ANQTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKTAGANTTDKE 289
Query: 1200 K--------RATDSGSYTIQLVNTVGSDSASCKVYVVDKP 1231
D+G YT N++G S + V+
Sbjct: 290 LEVLSLHNVTFEDAGEYTCLAGNSIGFSHHSAWLVVLPAE 329
Score = 48.8 bits (116), Expect = 1e-05
Identities = 19/101 (18%), Positives = 30/101 (29%)
Query: 1410 SGPVIVEEQPNKPVMDLSGVRDITVKAGEDFSIHVPFMAFPQPAAFWFANDSIIDDSDTR 1469
+ P + + + V A P P P+ W N
Sbjct: 111 EDTGVDTGAPYWTRPERMDKKLLAVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHRI 170
Query: 1470 VHKQLTMNSASLVVKNSQRSDGGQYRLQLKNPAGFDTATLH 1510
+L SLV+++ SD G Y ++N G T
Sbjct: 171 GGIKLRHQQWSLVMESVVPSDRGNYTCVVENKFGSIRQTYT 211
Score = 47.3 bits (112), Expect = 4e-05
Identities = 22/107 (20%), Positives = 34/107 (31%), Gaps = 12/107 (11%)
Query: 1414 IVEEQPNKPVMDLSGVRDITVKAGEDFSIHVPFMAFPQPAAFWF----ANDSIIDDSDTR 1469
++E P++P++ + T G D H + QP W N S + T
Sbjct: 214 VLERSPHRPILQAGLPANQTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPDGTP 273
Query: 1470 VHKQL--------TMNSASLVVKNSQRSDGGQYRLQLKNPAGFDTAT 1508
L L + N D G+Y N GF +
Sbjct: 274 YVTVLKTAGANTTDKELEVLSLHNVTFEDAGEYTCLAGNSIGFSHHS 320
Score = 46.5 bits (110), Expect = 7e-05
Identities = 25/138 (18%), Positives = 43/138 (31%), Gaps = 11/138 (7%)
Query: 1131 PPCAPKITSDLSIRDMTVLAGEEFTIT-VPFSGRPKPTPIWTVNGDEVSPDGRIKFETSE 1189
P + +G+ ++ P G P +W +G + P R+
Sbjct: 4 AAEVPGPEPGQQ-EQLVFGSGDAVELSCPPPGGGPMGPTVWVKDGTGLVPSERVLVGPQR 62
Query: 1190 NQTIYRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYVVDKPS---PPQGPLDVSDITPE 1246
Q +A DSG+Y+ + T V V D PS G + D +
Sbjct: 63 LQV----LNA-SHEDSGAYSCRQRLTQRV-LCHFSVRVTDAPSSGDDEDGEDEAEDTGVD 116
Query: 1247 SCSLSWKPPLDDGGSPIT 1264
+ + W P +
Sbjct: 117 TGAPYWTRPERMDKKLLA 134
Score = 42.7 bits (100), Expect = 0.001
Identities = 17/138 (12%), Positives = 34/138 (24%), Gaps = 19/138 (13%)
Query: 1412 PVIVEEQPNKPVMDLSGVRDITVKAGEDFSIH-VPFMAFPQPAAFWFANDSIIDDSDTRV 1470
P Q + +G+ + P P W + + + S+ RV
Sbjct: 8 PGPEPGQQ----------EQLVFGSGDAVELSCPPPGGGPMGPTVWVKDGTGLVPSE-RV 56
Query: 1471 HKQLTMNSASLVVKNSQRSDGGQYRLQLKNPAG---FDTATLHSRLRTLPDSVNPRCHLP 1527
+ L V N+ D G Y + + + + + D
Sbjct: 57 L----VGPQRLQVLNASHEDSGAYSCRQRLTQRVLCHFSVRVTDAPSSGDDEDGEDEAED 112
Query: 1528 SSTSKERPKFPTHPNHQP 1545
+ P +
Sbjct: 113 TGVDTGAPYWTRPERMDK 130
>2haz_A N-CAM 1, neural cell adhesion molecule 1; fibronectin type III
repeat, FN1, beta sandwich; 1.70A {Homo sapiens} SCOP:
b.1.2.1
Length = 105
Score = 104 bits (262), Expect = 2e-26
Identities = 25/100 (25%), Positives = 33/100 (33%), Gaps = 6/100 (6%)
Query: 668 DRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSWIRV-----GNT 722
D P P VE + + + P GG I Y E R W +
Sbjct: 5 DTPSSPSIDQVE-PYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEAS 63
Query: 723 RFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITT 762
+ I GL P Y R+ A N G + S S+ T
Sbjct: 64 MEGIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQ 103
Score = 103 bits (259), Expect = 4e-26
Identities = 23/130 (17%), Positives = 40/130 (30%), Gaps = 32/130 (24%)
Query: 998 PFDVPGAPGAPKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASM-AHI 1056
D P +P + V+ + + + +P GG PI +Y E R + ++ W A
Sbjct: 3 HMDTPSSPSIDQ-VEPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKE 61
Query: 1057 PDTSLKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQ 1116
+ L Y R+ A+N G
Sbjct: 62 ASMEGIVT------------------------------IVGLKPETTYAVRLAALNGKGL 91
Query: 1117 GPWSSSSDII 1126
G S++S+
Sbjct: 92 GEISAASEFK 101
Score = 99.4 bits (248), Expect = 1e-24
Identities = 28/98 (28%), Positives = 36/98 (36%), Gaps = 4/98 (4%)
Query: 373 SPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAIC 432
S D PS P I V + +D+P GG I Y + VG + W
Sbjct: 2 SHMDTPSSPSIDQVE-PYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAK 60
Query: 433 APSQ---INIPNLIEGRQYEFRVYAQNEAGLSLPSSAS 467
S + I L Y R+ A N GL S+AS
Sbjct: 61 EASMEGIVTIVGLKPETTYAVRLAALNGKGLGEISAAS 98
Score = 99.4 bits (248), Expect = 1e-24
Identities = 28/98 (28%), Positives = 36/98 (36%), Gaps = 4/98 (4%)
Query: 1980 SPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAIC 2039
S D PS P I V + +D+P GG I Y + VG + W
Sbjct: 2 SHMDTPSSPSIDQVE-PYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAK 60
Query: 2040 APSQ---INIPNLIEGRQYEFRVYAQNEAGLSLPSSAS 2074
S + I L Y R+ A N GL S+AS
Sbjct: 61 EASMEGIVTIVGLKPETTYAVRLAALNGKGLGEISAAS 98
Score = 95.1 bits (237), Expect = 3e-23
Identities = 21/101 (20%), Positives = 31/101 (30%), Gaps = 6/101 (5%)
Query: 1228 VDKPSPPQGPLDVSDITPESCSLSWKPPLDDGGSPITNYVVEKYESATGFWSKLSSFVRS 1287
+D PS P + + + + P GG PI Y E W +
Sbjct: 4 MDTPSSPSID--QVEPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKE 61
Query: 1288 P----AYDVFGLETNRQYRFRVRAENQYGVSEPLELDNSIT 1324
+ GL+ Y R+ A N G+ E T
Sbjct: 62 ASMEGIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKT 102
Score = 91.3 bits (227), Expect = 7e-22
Identities = 20/99 (20%), Positives = 34/99 (34%), Gaps = 5/99 (5%)
Query: 899 LDRPHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTK----VSSY 954
+D P P + ++ + + + P GG I Y E + VW
Sbjct: 4 MDTPSSPSIDQVEPYS-STAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEA 62
Query: 955 VTTPFVRVRNLAIGSTYEFRVMAENQYGLSKPALTIDPI 993
V + L +TY R+ A N GL + + +
Sbjct: 63 SMEGIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFK 101
Score = 90.9 bits (226), Expect = 1e-21
Identities = 18/91 (19%), Positives = 30/91 (32%), Gaps = 6/91 (6%)
Query: 276 LPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWIC----ISTTC 331
P P E T + ++ P+ GG+ + Y E R + W
Sbjct: 6 TPSSPSID--QVEPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEAS 63
Query: 332 HDTTFIVQGLTEGQEYLFHVMAVNENGMGPP 362
+ + GL Y + A+N G+G
Sbjct: 64 MEGIVTIVGLKPETTYAVRLAALNGKGLGEI 94
Score = 90.9 bits (226), Expect = 1e-21
Identities = 18/91 (19%), Positives = 30/91 (32%), Gaps = 6/91 (6%)
Query: 1883 LPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWIC----ISTTC 1938
P P E T + ++ P+ GG+ + Y E R + W
Sbjct: 6 TPSSPSID--QVEPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEAS 63
Query: 1939 HDTTFIVQGLTEGQEYLFHVMAVNENGMGPP 1969
+ + GL Y + A+N G+G
Sbjct: 64 MEGIVTIVGLKPETTYAVRLAALNGKGLGEI 94
Score = 82.1 bits (203), Expect = 1e-18
Identities = 23/133 (17%), Positives = 39/133 (29%), Gaps = 46/133 (34%)
Query: 1559 VDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEG 1618
V+ + + + +P GG PI +Y E R + ++ W
Sbjct: 15 VEPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSK------------------- 55
Query: 1619 KSIGSERGSTAQFLEREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKS 1678
W + +E +++ L Y R+ A+N G
Sbjct: 56 ----------------------WYDAKE-ASMEGIVTIVGLKPETTYAVRLAALNGKGLG 92
Query: 1679 EPS----ICTTPV 1687
E S T PV
Sbjct: 93 EISAASEFKTQPV 105
Score = 64.7 bits (158), Expect = 2e-12
Identities = 18/67 (26%), Positives = 25/67 (37%), Gaps = 7/67 (10%)
Query: 21 CYIIERREVGGAIWLKCND---YNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPS--- 74
Y E R VG +W +E +++ L Y R+ A+N G E S
Sbjct: 39 KYKAEWRAVGEEVWHSKWYDAKEASMEGIVTIVGLKPETTYAVRLAALNGKGLGEISAAS 98
Query: 75 -ICTTPV 80
T PV
Sbjct: 99 EFKTQPV 105
Score = 49.7 bits (119), Expect = 4e-07
Identities = 15/64 (23%), Positives = 24/64 (37%), Gaps = 1/64 (1%)
Query: 1328 PFTVPDPPGQPQIVDWDTNNATLMWDRPRTDGGSKIQGYKMLLKTPTGELPTTIWSKIRP 1387
P P Q V+ ++ A + +D P GG I YK + E+ + W +
Sbjct: 3 HMDTPSSPSIDQ-VEPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKE 61
Query: 1388 TSST 1391
S
Sbjct: 62 ASME 65
>2dn7_A Receptor-type tyrosine-protein phosphatase F; LAR protein,
leukocyte antigen related, structural genomics, NPPSFA;
NMR {Homo sapiens} SCOP: b.1.2.1
Length = 107
Score = 103 bits (259), Expect = 4e-26
Identities = 29/105 (27%), Positives = 43/105 (40%), Gaps = 7/105 (6%)
Query: 277 PGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHDTTF 336
PG P + +S +T L W+PPK G ++ Y ++ I D F
Sbjct: 8 PGRP--TMMISTTAMNTALLQWHPPKELPG-ELLGYRLQYCRADEARPNTIDFGKDDQHF 64
Query: 337 IVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPP 381
V GL +G Y+F + A N G+G E ++P D P
Sbjct: 65 TVTGLHKGTTYIFRLAAKNRAGLGEEFEKE----IRTPEDLSGPS 105
Score = 103 bits (259), Expect = 4e-26
Identities = 29/105 (27%), Positives = 43/105 (40%), Gaps = 7/105 (6%)
Query: 1884 PGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHDTTF 1943
PG P + +S +T L W+PPK G ++ Y ++ I D F
Sbjct: 8 PGRP--TMMISTTAMNTALLQWHPPKELPG-ELLGYRLQYCRADEARPNTIDFGKDDQHF 64
Query: 1944 IVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPP 1988
V GL +G Y+F + A N G+G E ++P D P
Sbjct: 65 TVTGLHKGTTYIFRLAAKNRAGLGEEFEKE----IRTPEDLSGPS 105
Score = 99.0 bits (247), Expect = 2e-24
Identities = 22/107 (20%), Positives = 39/107 (36%), Gaps = 7/107 (6%)
Query: 1229 DKPSPPQGPLDVSDITPESCSLSWKPPLDDGGSPITNYVVEKYESATGFWSKLSSFVRSP 1288
P P + +S + L W PP + G + Y ++ + + +
Sbjct: 6 SGPGRP--TMMISTTAMNTALLQWHPPKELPG-ELLGYRLQYCRADEARPNTIDFGKDDQ 62
Query: 1289 AYDVFGLETNRQYRFRVRAENQYGVSEPLELDNSITAKFPFTVPDPP 1335
+ V GL Y FR+ A+N+ G+ E E + P + P
Sbjct: 63 HFTVTGLHKGTTYIFRLAAKNRAGLGEEFE----KEIRTPEDLSGPS 105
Score = 87.1 bits (216), Expect = 2e-20
Identities = 24/104 (23%), Positives = 42/104 (40%), Gaps = 6/104 (5%)
Query: 902 PHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTKVSSYVTTPFVR 961
P P + A ++ L W PP++ G E+ Y ++ + +
Sbjct: 8 PGRPT-MMISTTAMNTALLQWHPPKELPG-ELLGYRLQYCRADEARPNTIDFGKDDQHFT 65
Query: 962 VRNLAIGSTYEFRVMAENQYGLSKPALTIDPIKAKHPFDVPGAP 1005
V L G+TY FR+ A+N+ GL + + + P D+ G
Sbjct: 66 VTGLHKGTTYIFRLAAKNRAGLGEEF----EKEIRTPEDLSGPS 105
Score = 81.7 bits (202), Expect = 2e-18
Identities = 19/105 (18%), Positives = 33/105 (31%), Gaps = 3/105 (2%)
Query: 371 AKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVA 430
S P P + +++ + L W P + G + GY + ++
Sbjct: 1 GSSGSSGPGRPTM-MISTTAMNTALLQWHPPKELPG-ELLGYRLQYCRADEARPNTIDFG 58
Query: 431 ICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDP 475
+ L +G Y FR+ A+N AGL
Sbjct: 59 KDDQH-FTVTGLHKGTTYIFRLAAKNRAGLGEEFEKEIRTPEDLS 102
Score = 81.7 bits (202), Expect = 2e-18
Identities = 19/105 (18%), Positives = 33/105 (31%), Gaps = 3/105 (2%)
Query: 1978 AKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVA 2037
S P P + +++ + L W P + G + GY + ++
Sbjct: 1 GSSGSSGPGRPTM-MISTTAMNTALLQWHPPKELPG-ELLGYRLQYCRADEARPNTIDFG 58
Query: 2038 ICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDP 2082
+ L +G Y FR+ A+N AGL
Sbjct: 59 KDDQH-FTVTGLHKGTTYIFRLAAKNRAGLGEEFEKEIRTPEDLS 102
Score = 79.0 bits (195), Expect = 2e-17
Identities = 20/99 (20%), Positives = 34/99 (34%), Gaps = 4/99 (4%)
Query: 667 SDRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSWIRV-GNTRFT 725
S P P + ++ L W P G + Y ++ + +
Sbjct: 5 SSGPGRPTM-MISTTAMNTALLQWHPPKELPG-ELLGYRLQYCRADEARPNTIDFGKDDQ 62
Query: 726 TMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKD 764
+TGL G Y FR+ A+N G + + T +D
Sbjct: 63 HFTVTGLHKGTTYIFRLAAKNRAGLGEEFEKE-IRTPED 100
Score = 69.0 bits (169), Expect = 5e-14
Identities = 20/124 (16%), Positives = 31/124 (25%), Gaps = 35/124 (28%)
Query: 1000 DVPGAPGAPKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDT 1059
PG P + ++ L W P+ G + Y ++ + + D
Sbjct: 6 SGPGRP-TMMISTTAMNTALLQWHPPKELPG-ELLGYRLQYCRADEARPNTIDFG-KDDQ 62
Query: 1060 SLKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPW 1119
VT L + Y FR+ A N AG G
Sbjct: 63 HFT--------------------------------VTGLHKGTTYIFRLAAKNRAGLGEE 90
Query: 1120 SSSS 1123
Sbjct: 91 FEKE 94
Score = 56.6 bits (137), Expect = 1e-09
Identities = 19/133 (14%), Positives = 34/133 (25%), Gaps = 49/133 (36%)
Query: 1559 VDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEG 1618
+ ++ L W P+ G + Y ++ + +
Sbjct: 16 STTAMNTALLQWHPPKELPG-ELLGYRLQYCRADEARPNTI------------------- 55
Query: 1619 KSIGSERGSTAQFLEREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKS 1678
D+ + F+V L +G Y FR+ A N G
Sbjct: 56 ---------------------------DFGKDDQHFTVTGLHKGTTYIFRLAAKNRAGLG 88
Query: 1679 EPS--ICTTPVKI 1689
E TP +
Sbjct: 89 EEFEKEIRTPEDL 101
Score = 51.6 bits (124), Expect = 6e-08
Identities = 15/64 (23%), Positives = 23/64 (35%), Gaps = 3/64 (4%)
Query: 21 CYIIERREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPS--ICTT 78
Y ++ A + + F+V L +G Y FR+ A N G E T
Sbjct: 39 GYRLQYCRADEARPNTIDF-GKDDQHFTVTGLHKGTTYIFRLAAKNRAGLGEEFEKEIRT 97
Query: 79 PVKI 82
P +
Sbjct: 98 PEDL 101
Score = 41.2 bits (97), Expect = 3e-04
Identities = 17/65 (26%), Positives = 24/65 (36%), Gaps = 3/65 (4%)
Query: 1330 TVPDPPGQP--QIVDWDTNNATLMWDRPRTDGGSKIQGYKMLLKTPTGELPTTIWSKIRP 1387
+ PG+P I N A L W P+ G ++ GY++ P TI
Sbjct: 3 SGSSGPGRPTMMISTTAMNTALLQWHPPKELPG-ELLGYRLQYCRADEARPNTIDFGKDD 61
Query: 1388 TSSTV 1392
TV
Sbjct: 62 QHFTV 66
>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural
genomics, IG-fold I-SET, RGD motif, homophilic adhesion,
arterial smooth muscle cells; 0.96A {Homo sapiens}
Length = 99
Score = 103 bits (258), Expect = 4e-26
Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 1/93 (1%)
Query: 479 KAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHH-IFAEGDTYT 537
P V L + + + + + G PKP +SWL+ + + P R AEG
Sbjct: 4 APPTFKVSLMDQSVREGQDVIMSIRVQGEPKPVVSWLRNRQPVRPDQRRFAEEAEGGLCR 63
Query: 538 LIINSVYGVDADEYVCRAVNKGGVKSTKAELII 570
L I + DA Y C+AVN+ G + +A L +
Sbjct: 64 LRILAAERGDAGFYTCKAVNEYGARQCEARLEV 96
Score = 103 bits (258), Expect = 4e-26
Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 1/93 (1%)
Query: 2086 KAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHH-IFAEGDTYT 2144
P V L + + + + + G PKP +SWL+ + + P R AEG
Sbjct: 4 APPTFKVSLMDQSVREGQDVIMSIRVQGEPKPVVSWLRNRQPVRPDQRRFAEEAEGGLCR 63
Query: 2145 LIINSVYGVDADEYVCRAVNKGGVKSTKAELII 2177
L I + DA Y C+AVN+ G + +A L +
Sbjct: 64 LRILAAERGDAGFYTCKAVNEYGARQCEARLEV 96
Score = 102 bits (256), Expect = 1e-25
Identities = 29/93 (31%), Positives = 41/93 (44%), Gaps = 1/93 (1%)
Query: 89 EKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREIS-SGARYRVETAGGVFR 147
P F V L D V G+ + + G P P WLRN + + R+ E GG+ R
Sbjct: 4 APPTFKVSLMDQSVREGQDVIMSIRVQGEPKPVVSWLRNRQPVRPDQRRFAEEAEGGLCR 63
Query: 148 LHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKI 180
L D G YTC+A N G +R+++
Sbjct: 64 LRILAAERGDAGFYTCKAVNEYGARQCEARLEV 96
Score = 102 bits (256), Expect = 1e-25
Identities = 29/93 (31%), Positives = 41/93 (44%), Gaps = 1/93 (1%)
Query: 1696 EKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREIS-SGARYRVETAGGVFR 1754
P F V L D V G+ + + G P P WLRN + + R+ E GG+ R
Sbjct: 4 APPTFKVSLMDQSVREGQDVIMSIRVQGEPKPVVSWLRNRQPVRPDQRRFAEEAEGGLCR 63
Query: 1755 LHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKI 1787
L D G YTC+A N G +R+++
Sbjct: 64 LRILAAERGDAGFYTCKAVNEYGARQCEARLEV 96
Score = 70.4 bits (173), Expect = 1e-14
Identities = 22/96 (22%), Positives = 38/96 (39%), Gaps = 4/96 (4%)
Query: 572 TAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVI-ESGGHFHVETSER 630
P F V + +G++V++ I G PKP ++W R+ + + F E
Sbjct: 4 APPTFKVSLMDQSVR---EGQDVIMSIRVQGEPKPVVSWLRNRQPVRPDQRRFAEEAEGG 60
Query: 631 HAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQI 666
L I A D Y A N+ G ++++
Sbjct: 61 LCRLRILAAERGDAGFYTCKAVNEYGARQCEARLEV 96
Score = 65.4 bits (160), Expect = 7e-13
Identities = 26/102 (25%), Positives = 38/102 (37%), Gaps = 10/102 (9%)
Query: 1130 APPCAPKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSE 1189
P L D +V G++ +++ G PKP W N V PD R E +E
Sbjct: 1 GSKAPPTFKVSL--MDQSVREGQDVIMSIRVQGEPKPVVSWLRNRQPVRPDQRRFAEEAE 58
Query: 1190 NQ----TIYRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYV 1227
I D+G YT + VN G+ ++ V
Sbjct: 59 GGLCRLRILA----AERGDAGFYTCKAVNEYGARQCEARLEV 96
Score = 53.4 bits (129), Expect = 1e-08
Identities = 16/79 (20%), Positives = 29/79 (36%)
Query: 1430 RDITVKAGEDFSIHVPFMAFPQPAAFWFANDSIIDDSDTRVHKQLTMNSASLVVKNSQRS 1489
D +V+ G+D + + P+P W N + R ++ L + ++R
Sbjct: 13 MDQSVREGQDVIMSIRVQGEPKPVVSWLRNRQPVRPDQRRFAEEAEGGLCRLRILAAERG 72
Query: 1490 DGGQYRLQLKNPAGFDTAT 1508
D G Y + N G
Sbjct: 73 DAGFYTCKAVNEYGARQCE 91
Score = 50.7 bits (122), Expect = 1e-07
Identities = 21/95 (22%), Positives = 34/95 (35%), Gaps = 1/95 (1%)
Query: 182 TPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIII 241
PP + EG + + I G+ VS +N + V+ D R + +
Sbjct: 4 APPTFKVSLMDQSVREGQDVIMSIRVQGEPKPVVSWLRNRQPVRPDQRRFAEEAEGGLCR 63
Query: 242 -FIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITG 275
I + DAG YT N G+ + + G
Sbjct: 64 LRILAAERGDAGFYTCKAVNEYGARQCEARLEVRG 98
Score = 50.7 bits (122), Expect = 1e-07
Identities = 21/95 (22%), Positives = 34/95 (35%), Gaps = 1/95 (1%)
Query: 1789 TPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIII 1848
PP + EG + + I G+ VS +N + V+ D R + +
Sbjct: 4 APPTFKVSLMDQSVREGQDVIMSIRVQGEPKPVVSWLRNRQPVRPDQRRFAEEAEGGLCR 63
Query: 1849 -FIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITG 1882
I + DAG YT N G+ + + G
Sbjct: 64 LRILAAERGDAGFYTCKAVNEYGARQCEARLEVRG 98
>1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins,
protein-protein interactions, C-type lectin domain;
2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1
Length = 283
Score = 109 bits (273), Expect = 5e-26
Identities = 32/209 (15%), Positives = 64/209 (30%), Gaps = 20/209 (9%)
Query: 261 SSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDIS 320
S G G I + P + V +++ + W PP+ + Y + +
Sbjct: 2 SPGISGGGGGIP---VIDGPTQ-ILVRDVSDTVAFVEWTPPRAKVDFILLKYGLVGGEGG 57
Query: 321 MPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSP 380
+ + VQ L G Y + AV +
Sbjct: 58 ---KTTFRLQPPLSQYSVQALRPGSRYEVSISAVRGTNESDASST-------QFTTEIDA 107
Query: 381 PGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPS--QIN 438
P V ++L WD + Q Y + + + + V V +
Sbjct: 108 PKNLRVGSRTATSLDLEWDNSE----AEAQEYKVVYSTLAGEQYHEVLVPKGIGPTTKTT 163
Query: 439 IPNLIEGRQYEFRVYAQNEAGLSLPSSAS 467
+ +L+ G +Y + A + S+P++ +
Sbjct: 164 LTDLVPGTEYGVGISAVMNSKQSIPATMN 192
Score = 109 bits (273), Expect = 5e-26
Identities = 32/209 (15%), Positives = 64/209 (30%), Gaps = 20/209 (9%)
Query: 1868 SSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDIS 1927
S G G I + P + V +++ + W PP+ + Y + +
Sbjct: 2 SPGISGGGGGIP---VIDGPTQ-ILVRDVSDTVAFVEWTPPRAKVDFILLKYGLVGGEGG 57
Query: 1928 MPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSP 1987
+ + VQ L G Y + AV +
Sbjct: 58 ---KTTFRLQPPLSQYSVQALRPGSRYEVSISAVRGTNESDASST-------QFTTEIDA 107
Query: 1988 PGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPS--QIN 2045
P V ++L WD + Q Y + + + + V V +
Sbjct: 108 PKNLRVGSRTATSLDLEWDNSE----AEAQEYKVVYSTLAGEQYHEVLVPKGIGPTTKTT 163
Query: 2046 IPNLIEGRQYEFRVYAQNEAGLSLPSSAS 2074
+ +L+ G +Y + A + S+P++ +
Sbjct: 164 LTDLVPGTEYGVGISAVMNSKQSIPATMN 192
Score = 107 bits (269), Expect = 2e-25
Identities = 37/219 (16%), Positives = 66/219 (30%), Gaps = 24/219 (10%)
Query: 254 YTVNLS--NSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTH 311
Y V++S + S + T P L V T + L W+ + +
Sbjct: 81 YEVSISAVRGTNE-SDASSTQFTTEIDAPKN-LRVGSRTATSLDLEWDNSEAE----AQE 134
Query: 312 YVVERRDISMPHWICISTTCHD---TTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINP 368
Y V ++ + + T + L G EY + AV + P
Sbjct: 135 YKVVYSTLAGEQYHEVLVPKGIGPTTKTTLTDLVPGTEYGVGISAVMNSKQSIPATM--- 191
Query: 369 IKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVN 428
+ + P +VT ++L W K I Y I + +
Sbjct: 192 ----NARTELDSPRDLMVTASSETSISLIWTKAS----GPIDHYRITFTPSSGISSEVTV 243
Query: 429 VAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSAS 467
+ + +L G +Y + A+ SL S+
Sbjct: 244 PR--DRTSYTLTDLEPGAEYIISITAERGRQQSLESTVD 280
Score = 107 bits (269), Expect = 2e-25
Identities = 37/219 (16%), Positives = 66/219 (30%), Gaps = 24/219 (10%)
Query: 1861 YTVNLS--NSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTH 1918
Y V++S + S + T P L V T + L W+ + +
Sbjct: 81 YEVSISAVRGTNE-SDASSTQFTTEIDAPKN-LRVGSRTATSLDLEWDNSEAE----AQE 134
Query: 1919 YVVERRDISMPHWICISTTCHD---TTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINP 1975
Y V ++ + + T + L G EY + AV + P
Sbjct: 135 YKVVYSTLAGEQYHEVLVPKGIGPTTKTTLTDLVPGTEYGVGISAVMNSKQSIPATM--- 191
Query: 1976 IKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVN 2035
+ + P +VT ++L W K I Y I + +
Sbjct: 192 ----NARTELDSPRDLMVTASSETSISLIWTKAS----GPIDHYRITFTPSSGISSEVTV 243
Query: 2036 VAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSAS 2074
+ + +L G +Y + A+ SL S+
Sbjct: 244 PR--DRTSYTLTDLEPGAEYIISITAERGRQQSLESTVD 280
Score = 103 bits (258), Expect = 5e-24
Identities = 35/220 (15%), Positives = 64/220 (29%), Gaps = 44/220 (20%)
Query: 902 PHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTKVSSYVTTPFVR 961
P + + + + WTPPR + Y + + T + + +
Sbjct: 15 IDGPTQILVRDVSDTVAFVEWTPPRAKVDFILLKYGLVGGEGGKTTFRLQPP--LSQYS- 71
Query: 962 VRNLAIGSTYEFRVMAENQYGLSKPALTIDPIKAKHPFDVPGAPGAPKGVDSTEDSISLV 1021
V+ L GS YE + A S + T AP + T S+ L
Sbjct: 72 VQALRPGSRYEVSISAVRGTNESDASST-------QFTTEIDAPKNLRVGSRTATSLDLE 124
Query: 1022 WSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEGKSIGSERGSTA 1081
W + Q Y V ++ +++ + + + K L
Sbjct: 125 WDNSE----AEAQEYKVVYSTLAGEQYHEVLVPKGIGPTTKTTL---------------- 164
Query: 1082 QFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPWSS 1121
T L+ EY + AV + Q ++
Sbjct: 165 --------------TDLVPGTEYGVGISAVMNSKQSIPAT 190
Score = 98.7 bits (246), Expect = 2e-22
Identities = 46/335 (13%), Positives = 91/335 (27%), Gaps = 91/335 (27%)
Query: 1001 VPGAPGAPKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTS 1060
V P D ++ + W+ PR + + +++ L+ + P +
Sbjct: 14 VIDGPTQILVRDVSDTVAFVEWTPPR----AKVDFILLKYGLVGGEGGKTTFRLQPPLSQ 69
Query: 1061 LKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPWS 1120
V +L YE + AV + S
Sbjct: 70 YS--------------------------------VQALRPGSRYEVSISAVRGTNESDAS 97
Query: 1121 SSSDIIMCCAPPCAPKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPD 1180
S+ AP +L + T ++ + W + +
Sbjct: 98 STQ----FTTEIDAP---KNLRVGSRT-----ATSLDL----------EWD------NSE 129
Query: 1181 GRIKF-----------ETSENQTIYRNKSAKRATDSG-----SYTIQL--VNTVG-SDSA 1221
+ + E + T + Y + + V S A
Sbjct: 130 AEAQEYKVVYSTLAGEQYHEVLVPKGIGPTTKTTLTDLVPGTEYGVGISAVMNSKQSIPA 189
Query: 1222 SCKVYVVDKPSPPQGPLDVSDITPESCSLSWKPPLDDGGSPITNYVVEKYESATGFWSKL 1281
+ P+ L V+ + S SL W PI +Y + + ++G S++
Sbjct: 190 TMNARTE--LDSPRD-LMVTASSETSISLIWTKAS----GPIDHYRIT-FTPSSGISSEV 241
Query: 1282 SSFVRSPAYDVFGLETNRQYRFRVRAENQYGVSEP 1316
+ +Y + LE +Y + AE S
Sbjct: 242 TVPRDRTSYTLTDLEPGAEYIISITAERGRQQSLE 276
Score = 95.3 bits (237), Expect = 3e-21
Identities = 30/177 (16%), Positives = 51/177 (28%), Gaps = 15/177 (8%)
Query: 1217 GSDSASCKVYVVDKPSPPQGPLDVSDITPESCSLSWKPPLDDGGSPITNYVVEKYESATG 1276
GS S + P + V D++ + W PP + Y + G
Sbjct: 1 GSPGISGGGGGIPVIDGPTQ-ILVRDVSDTVAFVEWTPPRAKVDFILLKYGL---VGGEG 56
Query: 1277 FWSKLSSFVRSPAYDVFGLETNRQYRFRVRAENQYGVSEPLELDNSITAKFPFTVPDPPG 1336
+ Y V L +Y + A S+ + T D P
Sbjct: 57 GKTTFRLQPPLSQYSVQALRPGSRYEVSISAVRGTNESDASSTQFT-------TEIDAPK 109
Query: 1337 QPQIVDWDTNNATLMWDRPRTDGGSKIQGYKMLLKTPTGELPTTIWSKIRPTSSTVY 1393
++ + L WD ++ Q YK++ T GE + +T
Sbjct: 110 NLRVGSRTATSLDLEWDNSE----AEAQEYKVVYSTLAGEQYHEVLVPKGIGPTTKT 162
Score = 91.4 bits (227), Expect = 6e-20
Identities = 41/225 (18%), Positives = 58/225 (25%), Gaps = 52/225 (23%)
Query: 902 PHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTKVSSYVTTPF-- 959
P+NL SL L W +E Y V + +V
Sbjct: 105 IDAPKNLRVGSRTATSLDLEWDNSE----AEAQEYKVVYSTLAGEQYHEVLVPKGIGPTT 160
Query: 960 -VRVRNLAIGSTYEFRVMAENQYGLSKPALTIDPIKAKHPFDVPGAPGAPKGVDSTEDSI 1018
+ +L G+ Y + A S PA + +P S+E SI
Sbjct: 161 KTTLTDLVPGTEYGVGISAVMNSKQSIPATM-------NARTELDSPRDLMVTASSETSI 213
Query: 1019 SLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEGKSIGSERG 1078
SL+W+K PI Y + S +P Y L
Sbjct: 214 SLIWTKAS----GPIDHYRITFTPSSGISSEV----TVPRDRTSYTL------------- 252
Query: 1079 STAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPWSSSS 1123
T L EY + A Q S+
Sbjct: 253 -----------------TDLEPGAEYIISITAERGRQQSLESTVD 280
Score = 87.2 bits (216), Expect = 2e-18
Identities = 31/222 (13%), Positives = 57/222 (25%), Gaps = 31/222 (13%)
Query: 1182 RIKFETSENQTIYRNKSAKRATDSG-----SYTIQL--VNTVGSDSASCKVYVVDKPSPP 1234
+ T + + Y + + V S + + P
Sbjct: 50 GLVGGEGGKTTFRLQPPLSQYSVQALRPGSRYEVSISAVRGTNE-SDASSTQFTTEIDAP 108
Query: 1235 QGPLDVSDITPESCSLSWKPPLDDGGSPITNYVVEKYESATGFWSKLSSFVRSPA---YD 1291
+ L V T S L W + Y V A + ++
Sbjct: 109 KN-LRVGSRTATSLDLEWDNSE----AEAQEYKVVYSTLAGEQYHEVLVPKGIGPTTKTT 163
Query: 1292 VFGLETNRQYRFRVRAENQYGVSEPLELDNSITAKFPFTVPDPPGQPQIVDWDTNNATLM 1351
+ L +Y + A S P ++ A+ T D P + + +L+
Sbjct: 164 LTDLVPGTEYGVGISAVMNSKQSIPA----TMNAR---TELDSPRDLMVTASSETSISLI 216
Query: 1352 WDRPRTDGGSKIQGYKMLLKTPTGELPTTIWSKIRPTSSTVY 1393
W + I Y++ +G P T Y
Sbjct: 217 WTKAS----GPIDHYRITFTPSSGI----SSEVTVPRDRTSY 250
Score = 82.5 bits (204), Expect = 7e-17
Identities = 22/111 (19%), Positives = 36/111 (32%), Gaps = 5/111 (4%)
Query: 647 YRVVAENDLGMDSAIVKIQISDRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIV 706
+ A + S + D P+ V S++L+W I +Y +
Sbjct: 175 VGISAVMNSK-QSIPATMNARTELDSPRDLMVTASSETSISLIWTKA----SGPIDHYRI 229
Query: 707 EKREHPMSSWIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTS 757
S T+ +T L PG +Y + AE +S ST
Sbjct: 230 TFTPSSGISSEVTVPRDRTSYTLTDLEPGAEYIISITAERGRQQSLESTVD 280
Score = 75.2 bits (185), Expect = 2e-14
Identities = 23/115 (20%), Positives = 35/115 (30%), Gaps = 9/115 (7%)
Query: 647 YRVVAENDLGMDSAIVKIQISDRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIV 706
+ A +S Q + D P+ V SL L W + Y V
Sbjct: 83 VSISAVRGTN-ESDASSTQFTTEIDAPKNLRVGSRTATSLDLEWDNS----EAEAQEYKV 137
Query: 707 EKRE----HPMSSWIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTS 757
+ G T +T L PG +Y + A +S P+T +
Sbjct: 138 VYSTLAGEQYHEVLVPKGIGPTTKTTLTDLVPGTEYGVGISAVMNSKQSIPATMN 192
Score = 71.8 bits (176), Expect = 3e-13
Identities = 18/88 (20%), Positives = 31/88 (35%), Gaps = 2/88 (2%)
Query: 670 PDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSWIRVGNTRFTTMAI 729
D P V D+ + W P + Y + E +++ + ++
Sbjct: 15 IDGPTQILVRDVSDTVAFVEWTPPRAKVDFILLKYGLVGGEGGKTTFRLQPPL--SQYSV 72
Query: 730 TGLSPGHQYEFRVYAENVYGRSDPSTTS 757
L PG +YE + A SD S+T
Sbjct: 73 QALRPGSRYEVSISAVRGTNESDASSTQ 100
Score = 66.4 bits (162), Expect = 2e-11
Identities = 26/168 (15%), Positives = 52/168 (30%), Gaps = 20/168 (11%)
Query: 196 PEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYT 255
E + + K+ Y+ + + + + T L +Y
Sbjct: 128 SEAEAQEYKVVYSTLAGEQYHEVLVPKGIGPTTKTTLTDLVPGT-------------EYG 174
Query: 256 VNLS-NSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVV 314
V +S + S T+N P L V+ ++ + +L W G + HY +
Sbjct: 175 VGISAVMNSKQSIPATMNARTELDSPRD-LMVTASSETSISLIWTKA--SG--PIDHYRI 229
Query: 315 ERRDISMPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPP 362
S ++ T++ + L G EY+ + A
Sbjct: 230 TFTPSSGISSE-VTVPRDRTSYTLTDLEPGAEYIISITAERGRQQSLE 276
Score = 66.4 bits (162), Expect = 2e-11
Identities = 26/168 (15%), Positives = 52/168 (30%), Gaps = 20/168 (11%)
Query: 1803 PEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYT 1862
E + + K+ Y+ + + + + T L +Y
Sbjct: 128 SEAEAQEYKVVYSTLAGEQYHEVLVPKGIGPTTKTTLTDLVPGT-------------EYG 174
Query: 1863 VNLS-NSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVV 1921
V +S + S T+N P L V+ ++ + +L W G + HY +
Sbjct: 175 VGISAVMNSKQSIPATMNARTELDSPRD-LMVTASSETSISLIWTKA--SG--PIDHYRI 229
Query: 1922 ERRDISMPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPP 1969
S ++ T++ + L G EY+ + A
Sbjct: 230 TFTPSSGISSE-VTVPRDRTSYTLTDLEPGAEYIISITAERGRQQSLE 276
Score = 60.6 bits (147), Expect = 1e-09
Identities = 15/87 (17%), Positives = 28/87 (32%), Gaps = 5/87 (5%)
Query: 901 RPHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTKVSSYVTTPFV 960
P +L + S++L WT I +Y + + T +
Sbjct: 196 ELDSPRDLMVTASSETSISLIWTKAS----GPIDHYRITFTPSSGISSEVTVPRDRTSYT 251
Query: 961 RVRNLAIGSTYEFRVMAENQYGLSKPA 987
+ +L G+ Y + AE S +
Sbjct: 252 -LTDLEPGAEYIISITAERGRQQSLES 277
Score = 42.9 bits (101), Expect = 8e-04
Identities = 15/61 (24%), Positives = 22/61 (36%), Gaps = 3/61 (4%)
Query: 22 YIIERREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPS---ICTT 78
+++ VGG +SV L G+ YE I AV +S+ S T
Sbjct: 45 ILLKYGLVGGEGGKTTFRLQPPLSQYSVQALRPGSRYEVSISAVRGTNESDASSTQFTTE 104
Query: 79 P 79
Sbjct: 105 I 105
Score = 39.8 bits (93), Expect = 0.007
Identities = 18/127 (14%), Positives = 32/127 (25%), Gaps = 47/127 (37%)
Query: 1559 VDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEG 1618
T S+ L W + Q Y V ++ +++ + + + K L
Sbjct: 114 GSRTATSLDLEWDNSE----AEAQEYKVVYSTLAGEQYHEVLVPKGIGPTTKTTLT---- 165
Query: 1619 KSIGSERGSTAQFLEREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKS 1678
+LV G +Y I AV +S
Sbjct: 166 ---------------------------------------DLVPGTEYGVGISAVMNSKQS 186
Query: 1679 EPSICTT 1685
P+
Sbjct: 187 IPATMNA 193
Score = 39.4 bits (92), Expect = 0.010
Identities = 11/59 (18%), Positives = 21/59 (35%), Gaps = 2/59 (3%)
Query: 22 YIIERREVGGAIW--LKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPSICTT 78
Y + + G + + ++ +LV G +Y I AV +S P+
Sbjct: 135 YKVVYSTLAGEQYHEVLVPKGIGPTTKTTLTDLVPGTEYGVGISAVMNSKQSIPATMNA 193
Score = 38.6 bits (90), Expect = 0.016
Identities = 18/131 (13%), Positives = 34/131 (25%), Gaps = 52/131 (39%)
Query: 1559 VDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEG 1618
D ++ + W+ PR + + +++ L+ + P +
Sbjct: 24 RDVSDTVAFVEWTPPR----AKVDFILLKYGLVGGEGGKTTFRLQPPLSQ---------- 69
Query: 1619 KSIGSERGSTAQFLEREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKS 1678
+SV L G+ YE I AV +S
Sbjct: 70 -----------------------------------YSVQALRPGSRYEVSISAVRGTNES 94
Query: 1679 EPS---ICTTP 1686
+ S T
Sbjct: 95 DASSTQFTTEI 105
Score = 38.3 bits (89), Expect = 0.021
Identities = 11/56 (19%), Positives = 18/56 (32%), Gaps = 2/56 (3%)
Query: 22 YIIERREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPSICT 77
Y I G + S+++ +L G +Y I A +S S
Sbjct: 227 YRITFTPSSGISSEVTVPRDRT--SYTLTDLEPGAEYIISITAERGRQQSLESTVD 280
Score = 32.9 bits (75), Expect = 1.1
Identities = 22/126 (17%), Positives = 32/126 (25%), Gaps = 51/126 (40%)
Query: 1559 VDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEG 1618
S+E SISL+W+K PI Y + S
Sbjct: 206 TASSETSISLIWTKAS----GPIDHYRITFTPSSGISS---------------------- 239
Query: 1619 KSIGSERGSTAQFLEREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKS 1678
E V S+++ +L G +Y I A +S
Sbjct: 240 --------------EVTVPRDR-----------TSYTLTDLEPGAEYIISITAERGRQQS 274
Query: 1679 EPSICT 1684
S
Sbjct: 275 LESTVD 280
>2e3v_A Neural cell adhesion molecule 1, 140 kDa isoform; NCAM, N-CAM 1,
NCAM-120, CD56 antigen, membra protein, glycoprotein,
structural genomics, NPPSFA; HET: PGE BTB; 1.95A {Homo
sapiens}
Length = 122
Score = 103 bits (259), Expect = 7e-26
Identities = 26/144 (18%), Positives = 44/144 (30%), Gaps = 33/144 (22%)
Query: 998 PFDVPGAPGAPKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASM-AHI 1056
P +P + V+ + + + +P GG PI +Y E R + ++ W A
Sbjct: 4 GSSGPSSPSIDQ-VEPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKE 62
Query: 1057 PDTSLKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQ 1116
+ L Y R+ A+N G
Sbjct: 63 ASMEGIVT------------------------------IVGLKPETTYAVRLAALNGKGL 92
Query: 1117 GPWSSSSDII-MCCAPPCAPKITS 1139
G S++S+ P APK+
Sbjct: 93 GEISAASEFKTQPVREPSAPKLEG 116
Score = 98.7 bits (246), Expect = 3e-24
Identities = 25/101 (24%), Positives = 33/101 (32%), Gaps = 6/101 (5%)
Query: 667 SDRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSWIRV-----GN 721
S P P VE + + + P GG I Y E R W
Sbjct: 5 SSGPSSPSIDQVE-PYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEA 63
Query: 722 TRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITT 762
+ + I GL P Y R+ A N G + S S+ T
Sbjct: 64 SMEGIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQ 104
Score = 98.7 bits (246), Expect = 4e-24
Identities = 23/109 (21%), Positives = 32/109 (29%), Gaps = 8/109 (7%)
Query: 1231 PSPPQGPLDVSDITPESCSLSWKPPLDDGGSPITNYVVEKYESATGFWSKLSSFVRSP-- 1288
PS P + + + + P GG PI Y E W +
Sbjct: 8 PSSPSID--QVEPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASM 65
Query: 1289 --AYDVFGLETNRQYRFRVRAENQYGVSEPLELDNSITAKFPFTVPDPP 1335
+ GL+ Y R+ A N G+ E T P P P
Sbjct: 66 EGIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQ--PVREPSAP 112
Score = 97.5 bits (243), Expect = 8e-24
Identities = 23/119 (19%), Positives = 37/119 (31%), Gaps = 8/119 (6%)
Query: 277 PGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWIC----ISTTCH 332
P P E T + ++ P+ GG+ + Y E R + W
Sbjct: 8 PSSPSID--QVEPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASM 65
Query: 333 DTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGG 391
+ + GL Y + A+N G+G P +PS P + G
Sbjct: 66 EGIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQ--PVREPSAPKLEGSGPSSG 122
Score = 97.5 bits (243), Expect = 8e-24
Identities = 23/119 (19%), Positives = 37/119 (31%), Gaps = 8/119 (6%)
Query: 1884 PGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWIC----ISTTCH 1939
P P E T + ++ P+ GG+ + Y E R + W
Sbjct: 8 PSSPSID--QVEPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASM 65
Query: 1940 DTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGG 1998
+ + GL Y + A+N G+G P +PS P + G
Sbjct: 66 EGIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQ--PVREPSAPKLEGSGPSSG 122
Score = 94.8 bits (236), Expect = 7e-23
Identities = 27/101 (26%), Positives = 35/101 (34%), Gaps = 4/101 (3%)
Query: 371 AKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVA 430
S PS P I V + +D+P GG I Y + VG + W
Sbjct: 1 GSSGSSGPSSPSIDQVE-PYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYD 59
Query: 431 ICAPSQ---INIPNLIEGRQYEFRVYAQNEAGLSLPSSASN 468
S + I L Y R+ A N GL S+AS
Sbjct: 60 AKEASMEGIVTIVGLKPETTYAVRLAALNGKGLGEISAASE 100
Score = 94.8 bits (236), Expect = 7e-23
Identities = 27/101 (26%), Positives = 35/101 (34%), Gaps = 4/101 (3%)
Query: 1978 AKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVA 2037
S PS P I V + +D+P GG I Y + VG + W
Sbjct: 1 GSSGSSGPSSPSIDQVE-PYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYD 59
Query: 2038 ICAPSQ---INIPNLIEGRQYEFRVYAQNEAGLSLPSSASN 2075
S + I L Y R+ A N GL S+AS
Sbjct: 60 AKEASMEGIVTIVGLKPETTYAVRLAALNGKGLGEISAASE 100
Score = 92.9 bits (231), Expect = 3e-22
Identities = 24/108 (22%), Positives = 34/108 (31%), Gaps = 7/108 (6%)
Query: 902 PHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTK----VSSYVTT 957
P P E + + + P GG I Y E + VW
Sbjct: 8 PSSPSIDQV-EPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASME 66
Query: 958 PFVRVRNLAIGSTYEFRVMAENQYGLSKPALTIDPIKAKHPFDVPGAP 1005
V + L +TY R+ A N GL + + + P P AP
Sbjct: 67 GIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQ--PVREPSAP 112
Score = 75.6 bits (186), Expect = 4e-16
Identities = 22/137 (16%), Positives = 38/137 (27%), Gaps = 46/137 (33%)
Query: 1555 TSKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLW 1614
+ V+ + + + +P GG PI +Y E R + ++ W +
Sbjct: 12 SIDQVEPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASM------ 65
Query: 1615 VSEGKSIGSERGSTAQFLEREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNA 1674
E +++ L Y R+ A+N
Sbjct: 66 ------------------------------------EGIVTIVGLKPETTYAVRLAALNG 89
Query: 1675 IGKSEPS----ICTTPV 1687
G E S T PV
Sbjct: 90 KGLGEISAASEFKTQPV 106
Score = 59.8 bits (145), Expect = 1e-10
Identities = 18/67 (26%), Positives = 25/67 (37%), Gaps = 7/67 (10%)
Query: 21 CYIIERREVGGAIWLKCND---YNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPS--- 74
Y E R VG +W +E +++ L Y R+ A+N G E S
Sbjct: 40 KYKAEWRAVGEEVWHSKWYDAKEASMEGIVTIVGLKPETTYAVRLAALNGKGLGEISAAS 99
Query: 75 -ICTTPV 80
T PV
Sbjct: 100 EFKTQPV 106
Score = 53.2 bits (128), Expect = 3e-08
Identities = 15/64 (23%), Positives = 25/64 (39%), Gaps = 1/64 (1%)
Query: 1328 PFTVPDPPGQPQIVDWDTNNATLMWDRPRTDGGSKIQGYKMLLKTPTGELPTTIWSKIRP 1387
+ P P Q V+ ++ A + +D P GG I YK + E+ + W +
Sbjct: 4 GSSGPSSPSIDQ-VEPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKE 62
Query: 1388 TSST 1391
S
Sbjct: 63 ASME 66
>2dtg_E Insulin receptor; IR ectodomain, X-RAY crystallography, hormone
receptor/immune system complex; 3.80A {Homo sapiens}
SCOP: b.1.2.1 b.1.2.1 b.1.2.1 c.10.2.5 c.10.2.5 g.3.9.1
PDB: 3loh_E
Length = 897
Score = 115 bits (289), Expect = 7e-26
Identities = 65/483 (13%), Positives = 108/483 (22%), Gaps = 102/483 (21%)
Query: 901 RPHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVV---------------------- 938
+ + D + L W P ++ +++
Sbjct: 468 CENELLKFSYIRTSFDKILLRWEPYWPPDFRDLLGFMLFYKEAPYQNVTEFDGQDACGSN 527
Query: 939 --EKKDYNSTVWTKVSSYVTTPFVRVRNLAIGSTYEFRVMAENQYGLSKPALTI--DPIK 994
D + + + P +R L + Y V + + D I
Sbjct: 528 SWTVVDIDPPLRSNDPKSQNHPGWLMRGLKPWTQYAIFVKTLVTFSDERRTYGAKSDIIY 587
Query: 995 AKHPFDVPGAPGAPKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMA 1054
+ P P P V ++ I L W P G I Y+V ++D
Sbjct: 588 VQTDATNPSVPLDPISVSNSSSQIILKWKPPSDPNG-NITHYLVFWERQAEDSE------ 640
Query: 1055 HIPDTSLKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAA 1114
L + + + + ++
Sbjct: 641 --------------------------------LFELDYCLKGLKLPSRTWSPPFESEDSQ 668
Query: 1115 GQGPWSSSSDIIMCCAPPCAPKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNG 1174
CC+ P + EE + F
Sbjct: 669 KHNQSEYEDSAGECCSCPKTD---------SQILKELEESSFRKTFEDYLHNVVFVPRPS 719
Query: 1175 DEVSPDGRIKFETSENQTIYRNKSAK--RATDSG-----SYTIQL--VNTVGS---DSAS 1222
+ G + + + K SG Y I+L N S +
Sbjct: 720 RKRRSLGDVGNAGNNEEHRPFEKVVNKESLVISGLRHFTGYRIELQACNQDTPEERCSVA 779
Query: 1223 CKVYVVDKPSPPQ----GPLDVSDITPESCSLSWKPPLDDGGSPITNYVV---EKYESAT 1275
V P GP+ L W+ P + G I Y V +
Sbjct: 780 AYVSARTMPEAKADDIVGPVTHEIFENNVVHLMWQEPKEPNG-LIVLYEVSYRRYGDEEL 838
Query: 1276 GFWSKLSSFVRSPAYDVFGLETNRQYRFRVRAENQYGVSEPLELDNSITAKFPFTVPDPP 1335
F + GL Y R+RA + G T F V D
Sbjct: 839 HLCDTRKHFALERGCRLRGLSPGN-YSVRIRATSLAGNGSW-------TEPTYFYVTDYL 890
Query: 1336 GQP 1338
P
Sbjct: 891 DVP 893
Score = 85.7 bits (211), Expect = 1e-16
Identities = 53/485 (10%), Positives = 128/485 (26%), Gaps = 46/485 (9%)
Query: 963 RNLAIGSTYEFRVMAENQYGLSKPALTIDPIKAKHPFDVPGAPGAPKGVDSTEDSISLVW 1022
N + + ++ + + I + ++ D I L W
Sbjct: 430 YNPKLCLSEIHKMEEVSGTKGRQERNDIALKTNGDQASCENELLKFSYIRTSFDKILLRW 489
Query: 1023 SKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEGKSIGSERGSTAQ 1082
+ +++ + + ++ V+ + +
Sbjct: 490 EPYWPPDFRDLLGFMLFYKEAPYQNVTEFDGQDACGSNSWTVVDIDPPLRSNDPKSQNHP 549
Query: 1083 FLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGP--WSSSSDIIMCCAPPCAPKITSD 1140
+ L +Y V + + + SDII P + D
Sbjct: 550 GW---------LMRGLKPWTQYAIFVKTLVTFSDERRTYGAKSDIIYVQTDATNPSVPLD 600
Query: 1141 LSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQTIYRNKSAK 1200
+ I + +P P NG+ + + +++ + K
Sbjct: 601 PISVSNS-----SSQIIL--KWKPPSDP----NGNITHYLVFWERQAEDSELFELDYCLK 649
Query: 1201 RATDSGS---YTIQLVNTVGSDSASCKVYVVDKPSPPQGPLDV-SDITPESCSLSWKPPL 1256
+ ++ + + + + S P+ + ++ S +++ L
Sbjct: 650 GLKLPSRTWSPPFESEDSQKHNQSEYEDSAGECCSCPKTDSQILKELEESSFRKTFEDYL 709
Query: 1257 DDG----GSPITNYVVEKYESATGFWSK--LSSFVRSPAYDVFGLETNRQYRFRVRAENQ 1310
+ + +A V + + GL YR ++A NQ
Sbjct: 710 HNVVFVPRPSRKRRSLGDVGNAGNNEEHRPFEKVVNKESLVISGLRHFTGYRIELQACNQ 769
Query: 1311 YGVSEPLELDNSITAK--FPFTVPDPPGQPQIVDWDTNNATLMWDRPRTDGGSKIQGYKM 1368
E + ++A+ D G ++ N LMW P+ G I Y++
Sbjct: 770 DTPEERCSVAAYVSARTMPEAKADDIVGPVTHEIFENNVVHLMWQEPKEPNG-LIVLYEV 828
Query: 1369 LLKTPTGELPTTIWSKIRPTSSTVYCKDTTMNSSNSE----------PGKQSGPVIVEEQ 1418
+ G+ + + + C+ ++ N G + P
Sbjct: 829 SYR-RYGDEELHLCDTRKHFALERGCRLRGLSPGNYSVRIRATSLAGNGSWTEPTYFYVT 887
Query: 1419 PNKPV 1423
V
Sbjct: 888 DYLDV 892
Score = 81.9 bits (201), Expect = 2e-15
Identities = 54/447 (12%), Positives = 122/447 (27%), Gaps = 66/447 (14%)
Query: 366 INPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWI----------- 414
I + + D + L W+ + G+ +
Sbjct: 457 IALKTNGDQASCENELLKFSYIRTSFDKILLRWEPYWPPDFRDLLGFMLFYKEAPYQNVT 516
Query: 415 ---DKHEVGSDAWQRVNVAICAPSQ---------INIPNLIEGRQYEFRVYAQNEAGLSL 462
+ GS++W V++ S + L QY V
Sbjct: 517 EFDGQDACGSNSWTVVDIDPPLRSNDPKSQNHPGWLMRGLKPWTQYAIFVKTLVTFSDER 576
Query: 463 PS--SASNSVQIKDPMAA--KAPEIIVPLRNANAIQ---NHNAQFQCTITGCPKPTISWL 515
+ + S+ + ++ + I +++ I + IT + W
Sbjct: 577 RTYGAKSDIIYVQTDATNPSVPLDPISVSNSSSQIILKWKPPSDPNGNITHY---LVFW- 632
Query: 516 KGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPK 575
+ + + + + + N+ + + E
Sbjct: 633 ---ERQAEDSELFELDYCLKGLKLPSRTWSPPFESEDSQKHNQSEYEDSAGECCSCPKTD 689
Query: 576 FNVPPRFRDTAY---FDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSERHA 632
+ ++++ F+ + VV +P + + + E F ++
Sbjct: 690 SQILKELEESSFRKTFEDYLHNVVFVPRPSRKRRSLGDVGNAGNNEEHRPFEKVVNKESL 749
Query: 633 ILTIRDASNVDTAPY-----RVVAENDLG-----MDSAIVKIQISDR---PDPPQFPTVE 679
+++ + + A N +A V + D T E
Sbjct: 750 VIS-------GLRHFTGYRIELQACNQDTPEERCSVAAYVSARTMPEAKADDIVGPVTHE 802
Query: 680 DIGHDSLALVWRAPIWDGGSNITNYIVEKREH---PMSSWI-RVGNTRFTTMAITGLSPG 735
++ + L+W+ P G I Y V R + + R + GLSPG
Sbjct: 803 IFENNVVHLMWQEPKEPNGL-IVLYEVSYRRYGDEELHLCDTRKHFALERGCRLRGLSPG 861
Query: 736 HQYEFRVYAENVYGRSDPSTTSDLITT 762
+ Y R+ A ++ G + + T
Sbjct: 862 N-YSVRIRATSLAGNGSWTEPTYFYVT 887
Score = 80.0 bits (196), Expect = 7e-15
Identities = 27/240 (11%), Positives = 65/240 (27%), Gaps = 14/240 (5%)
Query: 1860 DYTVNLSNSSGSVSGTFTINITGLPGPPIGPLDV-SEITKHTCTLHWNPPKYDG------ 1912
+S + + P + E+ + + + ++
Sbjct: 659 SPPFESEDSQKHNQSEYEDSAGECCSCPKTDSQILKELEESSFRKTFEDYLHNVVFVPRP 718
Query: 1913 GLKVTHYVVERRDISMPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEG 1972
K + + + ++ GL Y + A N++
Sbjct: 719 SRKRRSLGDVGNAGNNEEHRPFEKVVNKESLVISGLRHFTGYRIELQACNQDTPEERCSV 778
Query: 1973 INPIKAKSPYDKPSP--PGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDA 2030
+ A++ + + G + V+L W +P + G I Y + G +
Sbjct: 779 AAYVSARTMPEAKADDIVGPVTHEIFENNVVHLMWQEPKEPNG-LIVLYEVSYRRYGDEE 837
Query: 2031 WQRVNVAICAPSQIN--IPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAP 2088
+ + + L G Y R+ A + AG + + D + +
Sbjct: 838 LHLCDTRKHFALERGCRLRGLSPGN-YSVRIRATSLAGNG-SWTEPTYFYVTDYLDVPSN 895
Score = 79.6 bits (195), Expect = 9e-15
Identities = 27/244 (11%), Positives = 62/244 (25%), Gaps = 35/244 (14%)
Query: 277 PGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERR------------------- 317
+ + L W P + +++ +
Sbjct: 468 CENELLKFSYIRTSFDKILLRWEPYWPPDFRDLLGFMLFYKEAPYQNVTEFDGQDACGSN 527
Query: 318 -----DISMPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGI--NPIK 370
DI P + + ++++GL +Y V + G + I
Sbjct: 528 SWTVVDIDPPLRSNDPKSQNHPGWLMRGLKPWTQYAIFVKTLVTFSDERRTYGAKSDIIY 587
Query: 371 AKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVA 430
++ PS P P+ + L W P D G I Y + D+
Sbjct: 588 VQTDATNPSVPLDPISVSNSSSQIILKWKPPSDPNG-NITHYLVFWERQAEDSELFEL-- 644
Query: 431 ICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNA 490
+ R + +++ + ++ + K I+
Sbjct: 645 ----DYCLKGLKLPSRTWSPPFESEDSQKHNQSEYEDSAGE--CCSCPKTDSQILKELEE 698
Query: 491 NAIQ 494
++ +
Sbjct: 699 SSFR 702
Score = 79.6 bits (195), Expect = 9e-15
Identities = 27/244 (11%), Positives = 62/244 (25%), Gaps = 35/244 (14%)
Query: 1884 PGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERR------------------- 1924
+ + L W P + +++ +
Sbjct: 468 CENELLKFSYIRTSFDKILLRWEPYWPPDFRDLLGFMLFYKEAPYQNVTEFDGQDACGSN 527
Query: 1925 -----DISMPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGI--NPIK 1977
DI P + + ++++GL +Y V + G + I
Sbjct: 528 SWTVVDIDPPLRSNDPKSQNHPGWLMRGLKPWTQYAIFVKTLVTFSDERRTYGAKSDIIY 587
Query: 1978 AKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVA 2037
++ PS P P+ + L W P D G I Y + D+
Sbjct: 588 VQTDATNPSVPLDPISVSNSSSQIILKWKPPSDPNG-NITHYLVFWERQAEDSELFEL-- 644
Query: 2038 ICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNA 2097
+ R + +++ + ++ + K I+
Sbjct: 645 ----DYCLKGLKLPSRTWSPPFESEDSQKHNQSEYEDSAGE--CCSCPKTDSQILKELEE 698
Query: 2098 NAIQ 2101
++ +
Sbjct: 699 SSFR 702
Score = 77.7 bits (190), Expect = 3e-14
Identities = 62/495 (12%), Positives = 123/495 (24%), Gaps = 110/495 (22%)
Query: 1229 DKPSPPQGPLDVSDITPESCSLSWKPPLDDGGSPITNYVV-------------------- 1268
+ + L W+P + +++
Sbjct: 466 ASCENELLKFSYIRTSFDKILLRWEPYWPPDFRDLLGFMLFYKEAPYQNVTEFDGQDACG 525
Query: 1269 ----EKYESATGFWSKLSSFVRSPAYDVFGLETNRQYRFRVRAENQYGVSEPLELDNS-- 1322
+ S P + + GL+ QY V+ + S
Sbjct: 526 SNSWTVVDIDPPLRSNDPKSQNHPGWLMRGLKPWTQYAIFVKTLVTFSDERRTYGAKSDI 585
Query: 1323 ITAKFPFTVPDPPGQPQIVDWDTNNATLMWDRPRTDGGSKIQGYKMLLKTPTGELP---- 1378
I + T P P P V ++ L W P G I Y + + +
Sbjct: 586 IYVQTDATNPSVPLDPISVSNSSSQIILKWKPPSDPNG-NITHYLVFWERQAEDSELFEL 644
Query: 1379 -TTIWSKIRPTSSTVYCKDTTMNSSNSEPGKQSGPVIVEEQPNKPVMDLSGVRDITVKAG 1437
+ P+ + ++ + +++ + P L + + + +
Sbjct: 645 DYCLKGLKLPSRTWSPPFESEDSQKHNQSEYEDSAGECCSCPKTDSQILKELEESSFRKT 704
Query: 1438 -EDFSIHVPFMAFPQPAAFWFANDSIIDDSDTRVHKQLTMNSASLVVKNSQRSDGGQYRL 1496
ED+ +V F+ P + +++ + +N SLV+ + YR+
Sbjct: 705 FEDYLHNVVFVPRPSRKRRSLGDVGNAGNNEEHRPFEKVVNKESLVISGLRH--FTGYRI 762
Query: 1497 QLK--NPAGFDTATLHSRLRTLPDSVNPRCHLPSSTSKERPKFPTHPNHQPWLKWARASL 1554
+L+ N RC + + S + +
Sbjct: 763 ELQACNQDT----------------PEERCSVAAYVSARTMPEAKADDIVGPVTH----- 801
Query: 1555 TSKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLW 1614
+ + L+W +P+ G I Y V R D++ L
Sbjct: 802 ----EIFENNVVHLMWQEPKEPNG-LIVLYEVSYRRYGDEELHLCDTRKHFALERGCRLR 856
Query: 1615 VSEGKSIGSERGSTAQFLEREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNA 1674
L GN Y RI A +
Sbjct: 857 -------------------------------------------GLSPGN-YSVRIRATSL 872
Query: 1675 IG---KSEPSICTTP 1686
G +EP+
Sbjct: 873 AGNGSWTEPTYFYVT 887
Score = 73.4 bits (179), Expect = 7e-13
Identities = 35/238 (14%), Positives = 65/238 (27%), Gaps = 9/238 (3%)
Query: 254 YTVNLSNSSGSVSGTFTINITGLPGPPIGPLDV--SEITKHTCTLHWNPPKYDGGLKVTH 311
+ + I + P PLD + L W PP G +TH
Sbjct: 569 LVTFSDERRTYGAKSDIIYVQTDATNPSVPLDPISVSNSSSQIILKWKPPSDPNGN-ITH 627
Query: 312 YVVERRDISMPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKA 371
Y+V + + C + + + + + +
Sbjct: 628 YLVFWERQAEDSELFELDYCLKGL-----KLPSRTWSPPFESEDSQKHNQSEYEDSAGEC 682
Query: 372 KSPYDKPSPPGIPV-VTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVA 430
S S + + F + + SR + D G++ R
Sbjct: 683 CSCPKTDSQILKELEESSFRKTFEDYLHNVVFVPRPSRKRRSLGDVGNAGNNEEHRPFEK 742
Query: 431 ICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLR 488
+ + I L Y + A N+ S + V + AKA +I+ P+
Sbjct: 743 VVNKESLVISGLRHFTGYRIELQACNQDTPEERCSVAAYVSARTMPEAKADDIVGPVT 800
Score = 73.4 bits (179), Expect = 7e-13
Identities = 35/238 (14%), Positives = 65/238 (27%), Gaps = 9/238 (3%)
Query: 1861 YTVNLSNSSGSVSGTFTINITGLPGPPIGPLDV--SEITKHTCTLHWNPPKYDGGLKVTH 1918
+ + I + P PLD + L W PP G +TH
Sbjct: 569 LVTFSDERRTYGAKSDIIYVQTDATNPSVPLDPISVSNSSSQIILKWKPPSDPNGN-ITH 627
Query: 1919 YVVERRDISMPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKA 1978
Y+V + + C + + + + + +
Sbjct: 628 YLVFWERQAEDSELFELDYCLKGL-----KLPSRTWSPPFESEDSQKHNQSEYEDSAGEC 682
Query: 1979 KSPYDKPSPPGIPV-VTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVA 2037
S S + + F + + SR + D G++ R
Sbjct: 683 CSCPKTDSQILKELEESSFRKTFEDYLHNVVFVPRPSRKRRSLGDVGNAGNNEEHRPFEK 742
Query: 2038 ICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLR 2095
+ + I L Y + A N+ S + V + AKA +I+ P+
Sbjct: 743 VVNKESLVISGLRHFTGYRIELQACNQDTPEERCSVAAYVSARTMPEAKADDIVGPVT 800
Score = 67.6 bits (164), Expect = 4e-11
Identities = 29/259 (11%), Positives = 60/259 (23%), Gaps = 40/259 (15%)
Query: 900 DRPHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTKVSSYVTTPF 959
P P + + + + L W PP D G IT+Y+V + Y
Sbjct: 593 TNPSVPLDPISVSNSSSQIILKWKPPSDPNG-NITHYLVFWERQAEDSELFELDYCLKGL 651
Query: 960 VRVRNLAIGSTYEFRVMAENQYGLSKPALTIDPIKAKHPFDVPGAPGAPKGVDSTEDSIS 1019
T+ +E+ ++ + E S
Sbjct: 652 -----KLPSRTWSPPFESEDSQKHNQSEYEDSAGECCSCPKTDSQILKEL----EESSFR 702
Query: 1020 LVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEGKSIGSERGS 1079
+ H+ ++ +E + +
Sbjct: 703 KTFEDYLHNVV-----------------FVPRPSRKRRSLGDVGNAGNNEEHRPFEKVVN 745
Query: 1080 TAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPWSSSSDIIMCCAPPCAPKITS 1139
+ ++ L Y + A N S + + P A +
Sbjct: 746 KESLV----------ISGLRHFTGYRIELQACNQDTPEERCSVAAYVSARTMPEAK---A 792
Query: 1140 DLSIRDMTVLAGEEFTITV 1158
D + +T E + +
Sbjct: 793 DDIVGPVTHEIFENNVVHL 811
Score = 56.8 bits (136), Expect = 7e-08
Identities = 21/114 (18%), Positives = 35/114 (30%), Gaps = 7/114 (6%)
Query: 254 YTVNLSNSSGSVSGTFTINITGLPGPPIGPLDVS--EITKHTCTLHWNPPKYDGGLKVTH 311
+ SV+ + V+ + L W PK GL +
Sbjct: 767 CNQDTPEERCSVAAYVSARTMPEAKADDIVGPVTHEIFENNVVHLMWQEPKEPNGL-IVL 825
Query: 312 YVVE-RRDISMPHWICISTTCH--DTTFIVQGLTEGQEYLFHVMAVNENGMGPP 362
Y V RR +C + + ++GL+ G Y + A + G G
Sbjct: 826 YEVSYRRYGDEELHLCDTRKHFALERGCRLRGLSPG-NYSVRIRATSLAGNGSW 878
Score = 43.0 bits (100), Expect = 0.001
Identities = 17/156 (10%), Positives = 40/156 (25%), Gaps = 27/156 (17%)
Query: 1973 INPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWI----------- 2021
I + + D + L W+ + G+ +
Sbjct: 457 IALKTNGDQASCENELLKFSYIRTSFDKILLRWEPYWPPDFRDLLGFMLFYKEAPYQNVT 516
Query: 2022 ---DKHEVGSDAWQRVNVAICAPSQ---------INIPNLIEGRQYEFRVYAQNEAGLSL 2069
+ GS++W V++ S + L QY V
Sbjct: 517 EFDGQDACGSNSWTVVDIDPPLRSNDPKSQNHPGWLMRGLKPWTQYAIFVKTLVTFSDER 576
Query: 2070 PS--SASNSVQIKDPMAA--KAPEIIVPLRNANAIQ 2101
+ + S+ + ++ + I +++ I
Sbjct: 577 RTYGAKSDIIYVQTDATNPSVPLDPISVSNSSSQII 612
Score = 42.6 bits (99), Expect = 0.002
Identities = 19/176 (10%), Positives = 50/176 (28%), Gaps = 21/176 (11%)
Query: 599 PFTGYPKPKITWYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAPYRVVAENDLGMD 658
T Y + W R E F ++ + L R T +E+ +
Sbjct: 624 NITHY---LVFWERQAE---DSELFELDYCLKGLKLPSR------TWSPPFESEDSQKHN 671
Query: 659 SAIVKIQISDRPDPPQFPT--VEDIGHDSLALVWRAPIWD-------GGSNITNYIVEKR 709
+ + + P+ + ++++ S + + + + V
Sbjct: 672 QSEYEDSAGECCSCPKTDSQILKELEESSFRKTFEDYLHNVVFVPRPSRKRRSLGDVGNA 731
Query: 710 EHPMSSWIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKDT 765
+ ++ I+GL Y + A N + + + ++ +
Sbjct: 732 GNNEEHRPFEKVVNKESLVISGLRHFTGYRIELQACNQDTPEERCSVAAYVSARTM 787
Score = 37.6 bits (86), Expect = 0.056
Identities = 29/315 (9%), Positives = 66/315 (20%), Gaps = 47/315 (14%)
Query: 1387 PTSSTVYCKDTTMNSSNSEPGKQSGPVI-------VEEQPNKPVMDLSGVRDITVKAGED 1439
P + + T++S S + VI + N + + I +G
Sbjct: 309 PKVCHLLEGEKTIDSVTSAQELRGCTVINGSLIINIRGGNNLAAELEANLGLIEEISGYL 368
Query: 1440 FSIHVPFMAFPQPAAFWFANDSIIDDSDTRVHKQLTMNSASLVVKNSQRSDGGQYRLQLK 1499
+ +F +I R N + + N +
Sbjct: 369 KIRRSY----ALVSLSFFRKLRLI-----RGETLEIGNYSFYALDNQNLRQLWDWSKHNL 419
Query: 1500 NPAGFDTATLHSRLRTLPDSVNPRCHLPSSTSKERPKFPTHPNHQPWLKWARASLTSKGV 1559
++ L + + +ER N S
Sbjct: 420 TITQGKLFFHYNPKLCLSEIHKMEEVSGTKGRQERNDIALKTNGDQASCENELLKFSYIR 479
Query: 1560 DSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEGK 1619
+ D I L W + +++ + + ++ V+ +
Sbjct: 480 T-SFDKILLRWEPYWPPDFRDLLGFMLFYKEAPYQNVTEFDGQDACGSNSWTVVDIDPPL 538
Query: 1620 SIGSERGSTAQFLEREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIG--- 1676
+ + + L Y + +
Sbjct: 539 RSNDPKSQN----------------------HPGWLMRGLKPWTQYAIFVKTLVTFSDER 576
Query: 1677 -----KSEPSICTTP 1686
KS+ T
Sbjct: 577 RTYGAKSDIIYVQTD 591
Score = 30.3 bits (67), Expect = 9.1
Identities = 24/194 (12%), Positives = 45/194 (23%), Gaps = 34/194 (17%)
Query: 12 YYCEIIVDDCYIIERREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGK- 70
+ + + G + + V + S + L Y + A N
Sbjct: 714 FVPRPSRKRRSLGDVGNAGNNEEHRPFEKVVNKESLVISGLRHFTGYRIELQACNQDTPE 773
Query: 71 --SEPSICTTPVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWL--- 125
+ + + E K D IV + E V W
Sbjct: 774 ERCSVAAYVSARTMPE----AKADDIVGP------------VTHEIFENNVVHLMWQEPK 817
Query: 126 -RNG---------REISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCE--AYNSVGFAH 173
NG R + +T + + G+Y+ A + G
Sbjct: 818 EPNGLIVLYEVSYRRYGDEELHLCDTRKHFALERGCRLRGLSPGNYSVRIRATSLAGNGS 877
Query: 174 TSSRVKIGTPPRID 187
+ +D
Sbjct: 878 WTEPTYFYVTDYLD 891
>2bk8_A Connectin, M1, titin heart isoform N2-B; IG domain, M-BAND,
structural protein, muscle, antibo; 1.69A {Homo sapiens}
Length = 97
Score = 102 bits (256), Expect = 8e-26
Identities = 21/92 (22%), Positives = 41/92 (44%), Gaps = 1/92 (1%)
Query: 480 APEIIVPLRNANAIQNHNAQFQCTITGCPKPT-ISWLKGSREITPSARHHIFAEGDTYTL 538
+ + +A + + ++ C I + T ++W G R++ S ++ I E L
Sbjct: 1 GAMVSGQIMHAVGEEGGHVKYVCKIENYDQSTQVTWYFGVRQLENSEKYEITYEDGVAIL 60
Query: 539 IINSVYGVDADEYVCRAVNKGGVKSTKAELII 570
+ + +D Y C+ VN G S+ AEL +
Sbjct: 61 YVKDITKLDDGTYRCKVVNDYGEDSSYAELFV 92
Score = 102 bits (256), Expect = 8e-26
Identities = 21/92 (22%), Positives = 41/92 (44%), Gaps = 1/92 (1%)
Query: 2087 APEIIVPLRNANAIQNHNAQFQCTITGCPKPT-ISWLKGSREITPSARHHIFAEGDTYTL 2145
+ + +A + + ++ C I + T ++W G R++ S ++ I E L
Sbjct: 1 GAMVSGQIMHAVGEEGGHVKYVCKIENYDQSTQVTWYFGVRQLENSEKYEITYEDGVAIL 60
Query: 2146 IINSVYGVDADEYVCRAVNKGGVKSTKAELII 2177
+ + +D Y C+ VN G S+ AEL +
Sbjct: 61 YVKDITKLDDGTYRCKVVNDYGEDSSYAELFV 92
Score = 87.8 bits (218), Expect = 1e-20
Identities = 16/89 (17%), Positives = 35/89 (39%), Gaps = 1/89 (1%)
Query: 93 FIVPLKDLVVPLGKLLTLQCEATGTPVP-KCRWLRNGREISSGARYRVETAGGVFRLHFN 151
+ V G + C+ + W R++ + +Y + GV L+
Sbjct: 4 VSGQIMHAVGEEGGHVKYVCKIENYDQSTQVTWYFGVRQLENSEKYEITYEDGVAILYVK 63
Query: 152 EVTDVDNGDYTCEAYNSVGFAHTSSRVKI 180
++T +D+G Y C+ N G + + + +
Sbjct: 64 DITKLDDGTYRCKVVNDYGEDSSYAELFV 92
Score = 87.8 bits (218), Expect = 1e-20
Identities = 16/89 (17%), Positives = 35/89 (39%), Gaps = 1/89 (1%)
Query: 1700 FIVPLKDLVVPLGKLLTLQCEATGTPVP-KCRWLRNGREISSGARYRVETAGGVFRLHFN 1758
+ V G + C+ + W R++ + +Y + GV L+
Sbjct: 4 VSGQIMHAVGEEGGHVKYVCKIENYDQSTQVTWYFGVRQLENSEKYEITYEDGVAILYVK 63
Query: 1759 EVTDVDNGDYTCEAYNSVGFAHTSSRVKI 1787
++T +D+G Y C+ N G + + + +
Sbjct: 64 DITKLDDGTYRCKVVNDYGEDSSYAELFV 92
Score = 65.0 bits (159), Expect = 9e-13
Identities = 19/77 (24%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Query: 591 GENVVVKIPFTGYPKP-KITWYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAPYRV 649
G +V Y + ++TWY +E+ + + + AIL ++D + +D YR
Sbjct: 16 GGHVKYVCKIENYDQSTQVTWYFGVRQLENSEKYEITYEDGVAILYVKDITKLDDGTYRC 75
Query: 650 VAENDLGMDSAIVKIQI 666
ND G DS+ ++ +
Sbjct: 76 KVVNDYGEDSSYAELFV 92
Score = 60.0 bits (146), Expect = 7e-11
Identities = 12/98 (12%), Positives = 30/98 (30%), Gaps = 10/98 (10%)
Query: 1134 APKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPI-WTVNGDEVSPDGRIKFETSENQ- 1191
++ + G + T + W ++ + + +
Sbjct: 1 GAMVSGQI--MHAVGEEGGHVKYVCKIENYDQSTQVTWYFGVRQLENSEKYEITYEDGVA 58
Query: 1192 --TIYRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYV 1227
+ D G+Y ++VN G DS+ +++V
Sbjct: 59 ILYVKD----ITKLDDGTYRCKVVNDYGEDSSYAELFV 92
Score = 58.1 bits (141), Expect = 3e-10
Identities = 22/85 (25%), Positives = 40/85 (47%), Gaps = 3/85 (3%)
Query: 195 IPEGDNTK--VKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAG 252
EG + K KI DQ +V+ R +++ ++++ T D I+++K+I K D G
Sbjct: 13 GEEGGHVKYVCKIE-NYDQSTQVTWYFGVRQLENSEKYEITYEDGVAILYVKDITKLDDG 71
Query: 253 DYTVNLSNSSGSVSGTFTINITGLP 277
Y + N G S + + G+
Sbjct: 72 TYRCKVVNDYGEDSSYAELFVKGVR 96
Score = 58.1 bits (141), Expect = 3e-10
Identities = 22/85 (25%), Positives = 40/85 (47%), Gaps = 3/85 (3%)
Query: 1802 IPEGDNTK--VKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAG 1859
EG + K KI DQ +V+ R +++ ++++ T D I+++K+I K D G
Sbjct: 13 GEEGGHVKYVCKIE-NYDQSTQVTWYFGVRQLENSEKYEITYEDGVAILYVKDITKLDDG 71
Query: 1860 DYTVNLSNSSGSVSGTFTINITGLP 1884
Y + N G S + + G+
Sbjct: 72 TYRCKVVNDYGEDSSYAELFVKGVR 96
Score = 46.9 bits (112), Expect = 2e-06
Identities = 15/80 (18%), Positives = 29/80 (36%), Gaps = 2/80 (2%)
Query: 1430 RDITVKAGEDFSIHVPFMAFPQPAAF-WFANDSIIDDSDTRVHKQLTMNSASLVVKNSQR 1488
+ G + Q W+ +++S+ + A L VK+ +
Sbjct: 9 MHAVGEEGGHVKYVCKIENYDQSTQVTWYFGVRQLENSE-KYEITYEDGVAILYVKDITK 67
Query: 1489 SDGGQYRLQLKNPAGFDTAT 1508
D G YR ++ N G D++
Sbjct: 68 LDDGTYRCKVVNDYGEDSSY 87
>1fhg_A Telokin; immunoglobulin fold, beta barrel, contractIle protein;
2.00A {Meleagris gallopavo} SCOP: b.1.1.4 PDB: 1tlk_A
Length = 154
Score = 104 bits (261), Expect = 8e-26
Identities = 27/119 (22%), Positives = 49/119 (41%), Gaps = 1/119 (0%)
Query: 464 SSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITP 523
+ + ++ + P + + ++ A+F C + G P P + W K +
Sbjct: 25 NEDAFLEEVAEEKPHVKPYFTKTILDMEVVEGSAARFDCKVEGYPDPEVMWFKDDNPVKE 84
Query: 524 SARHHIFAEGD-TYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPR 581
S I + + +L I+ V G D +Y C+AVN G + AEL++ T K
Sbjct: 85 SRHFQIDYDEEGNCSLTISEVCGDDDAKYTCKAVNSLGEATCTAELLVETMGKEGEGEG 143
Score = 104 bits (261), Expect = 8e-26
Identities = 27/119 (22%), Positives = 49/119 (41%), Gaps = 1/119 (0%)
Query: 2071 SSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITP 2130
+ + ++ + P + + ++ A+F C + G P P + W K +
Sbjct: 25 NEDAFLEEVAEEKPHVKPYFTKTILDMEVVEGSAARFDCKVEGYPDPEVMWFKDDNPVKE 84
Query: 2131 SARHHIFAEGD-TYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPR 2188
S I + + +L I+ V G D +Y C+AVN G + AEL++ T K
Sbjct: 85 SRHFQIDYDEEGNCSLTISEVCGDDDAKYTCKAVNSLGEATCTAELLVETMGKEGEGEG 143
Score = 102 bits (256), Expect = 4e-25
Identities = 28/136 (20%), Positives = 51/136 (37%), Gaps = 5/136 (3%)
Query: 56 NDYEFRIIAVNAIGKSEPSICTTPVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEAT 115
I N + + + E KP F + D+ V G C+
Sbjct: 11 GSSPTSPINANKVENEDAFLEEVA----EEKPHVKPYFTKTILDMEVVEGSAARFDCKVE 66
Query: 116 GTPVPKCRWLRNGREISSGARYRVETAG-GVFRLHFNEVTDVDNGDYTCEAYNSVGFAHT 174
G P P+ W ++ + ++++ G L +EV D+ YTC+A NS+G A
Sbjct: 67 GYPDPEVMWFKDDNPVKESRHFQIDYDEEGNCSLTISEVCGDDDAKYTCKAVNSLGEATC 126
Query: 175 SSRVKIGTPPRIDRMP 190
++ + + T +
Sbjct: 127 TAELLVETMGKEGEGE 142
Score = 102 bits (256), Expect = 4e-25
Identities = 28/136 (20%), Positives = 51/136 (37%), Gaps = 5/136 (3%)
Query: 1663 NDYEFRIIAVNAIGKSEPSICTTPVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEAT 1722
I N + + + E KP F + D+ V G C+
Sbjct: 11 GSSPTSPINANKVENEDAFLEEVA----EEKPHVKPYFTKTILDMEVVEGSAARFDCKVE 66
Query: 1723 GTPVPKCRWLRNGREISSGARYRVETAG-GVFRLHFNEVTDVDNGDYTCEAYNSVGFAHT 1781
G P P+ W ++ + ++++ G L +EV D+ YTC+A NS+G A
Sbjct: 67 GYPDPEVMWFKDDNPVKESRHFQIDYDEEGNCSLTISEVCGDDDAKYTCKAVNSLGEATC 126
Query: 1782 SSRVKIGTPPRIDRMP 1797
++ + + T +
Sbjct: 127 TAELLVETMGKEGEGE 142
Score = 90.3 bits (224), Expect = 8e-21
Identities = 31/144 (21%), Positives = 56/144 (38%), Gaps = 7/144 (4%)
Query: 540 INSVYGV-DADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPRF----RDTAYFDKGENV 594
I+ + G + +N V++ A L + K +V P F D + G
Sbjct: 1 ISGMSGRKASGSSPTSPINANKVENEDAFLEEVAEEKPHVKPYFTKTILDMEVVE-GSAA 59
Query: 595 VVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSER-HAILTIRDASNVDTAPYRVVAEN 653
GYP P++ W++D+ ++ HF ++ E + LTI + D A Y A N
Sbjct: 60 RFDCKVEGYPDPEVMWFKDDNPVKESRHFQIDYDEEGNCSLTISEVCGDDDAKYTCKAVN 119
Query: 654 DLGMDSAIVKIQISDRPDPPQFPT 677
LG + ++ + +
Sbjct: 120 SLGEATCTAELLVETMGKEGEGEG 143
Score = 71.0 bits (174), Expect = 3e-14
Identities = 25/137 (18%), Positives = 46/137 (33%), Gaps = 2/137 (1%)
Query: 1110 AVNAAGQGPWSSSSDIIMCCAPPCAPKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPI 1169
+NA + + + P P T + DM V+ G G P P +
Sbjct: 17 PINANKVENEDAFLEEVAEEKPHVKPYFTKTI--LDMEVVEGSAARFDCKVEGYPDPEVM 74
Query: 1170 WTVNGDEVSPDGRIKFETSENQTIYRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYVVD 1229
W + + V + + E S D YT + VN++G + + ++ V
Sbjct: 75 WFKDDNPVKESRHFQIDYDEEGNCSLTISEVCGDDDAKYTCKAVNSLGEATCTAELLVET 134
Query: 1230 KPSPPQGPLDVSDITPE 1246
+G + + E
Sbjct: 135 MGKEGEGEGEGEEDEEE 151
Score = 65.3 bits (159), Expect = 4e-12
Identities = 23/134 (17%), Positives = 42/134 (31%), Gaps = 1/134 (0%)
Query: 161 YTCEAYNSVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKN 220
+ N F + K P + + + EG + G EV K+
Sbjct: 19 NANKVENEDAFLEEVAEEKPHVKPYFTKTILDMEVVEGSAARFDCKVEGYPDPEVMWFKD 78
Query: 221 GRVVQSDDRFKFTVLDDYIII-FIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGP 279
V+ F+ ++ I E+ +D YT NS G + T + + +
Sbjct: 79 DNPVKESRHFQIDYDEEGNCSLTISEVCGDDDAKYTCKAVNSLGEATCTAELLVETMGKE 138
Query: 280 PIGPLDVSEITKHT 293
G + E +
Sbjct: 139 GEGEGEGEEDEEEE 152
Score = 65.3 bits (159), Expect = 4e-12
Identities = 23/134 (17%), Positives = 42/134 (31%), Gaps = 1/134 (0%)
Query: 1768 YTCEAYNSVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKN 1827
+ N F + K P + + + EG + G EV K+
Sbjct: 19 NANKVENEDAFLEEVAEEKPHVKPYFTKTILDMEVVEGSAARFDCKVEGYPDPEVMWFKD 78
Query: 1828 GRVVQSDDRFKFTVLDDYIII-FIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGP 1886
V+ F+ ++ I E+ +D YT NS G + T + + +
Sbjct: 79 DNPVKESRHFQIDYDEEGNCSLTISEVCGDDDAKYTCKAVNSLGEATCTAELLVETMGKE 138
Query: 1887 PIGPLDVSEITKHT 1900
G + E +
Sbjct: 139 GEGEGEGEEDEEEE 152
Score = 46.4 bits (110), Expect = 1e-05
Identities = 22/112 (19%), Positives = 40/112 (35%)
Query: 1397 TTMNSSNSEPGKQSGPVIVEEQPNKPVMDLSGVRDITVKAGEDFSIHVPFMAFPQPAAFW 1456
+ +N++ E + EE+P+ + D+ V G +P P W
Sbjct: 16 SPINANKVENEDAFLEEVAEEKPHVKPYFTKTILDMEVVEGSAARFDCKVEGYPDPEVMW 75
Query: 1457 FANDSIIDDSDTRVHKQLTMNSASLVVKNSQRSDGGQYRLQLKNPAGFDTAT 1508
F +D+ + +S + SL + D +Y + N G T T
Sbjct: 76 FKDDNPVKESRHFQIDYDEEGNCSLTISEVCGDDDAKYTCKAVNSLGEATCT 127
Score = 33.7 bits (77), Expect = 0.27
Identities = 13/63 (20%), Positives = 21/63 (33%), Gaps = 5/63 (7%)
Query: 2147 INSVYGV-DADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPRF----RDTAYFESDVVV 2201
I+ + G + +N V++ A L + K +V P F D E
Sbjct: 1 ISGMSGRKASGSSPTSPINANKVENEDAFLEEVAEEKPHVKPYFTKTILDMEVVEGSAAR 60
Query: 2202 VVC 2204
C
Sbjct: 61 FDC 63
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth
factor-receptor complex, receptor tyrosine kinase, CY
4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus
musculus}
Length = 289
Score = 108 bits (272), Expect = 8e-26
Identities = 36/225 (16%), Positives = 74/225 (32%), Gaps = 17/225 (7%)
Query: 453 YAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGC-PKPT 511
+ S + + +KDP A + + ++ A C IT K +
Sbjct: 69 TELEDPM---AGSTTIHLYVKDP----AHSWNLLAQEVTVVEGQEAVLPCLITDPALKDS 121
Query: 512 ISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIM 571
+S ++ + F+ II +D++ YVC+ + G ++ + +
Sbjct: 122 VSLMREGGRQVLRKTVYFFSPWRG--FIIRKAKVLDSNTYVCKTMVNGRESTS-TGIWLK 178
Query: 572 TAPKFNVPPRFRDTA---YFDKGENVVVKIPFTGYPKPKITWYRDNEV---IESGGHFHV 625
PP+ + +GE + T + + I F
Sbjct: 179 VNRVHPEPPQIKLEPSKLVRIRGEAAQIVCSATNAEVGFNVILKRGDTKLEIPLNSDFQD 238
Query: 626 ETSERHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQISDRP 670
++ L++ D Y VA ND+G +A + Q+ +
Sbjct: 239 NYYKKVRALSLNAVDFQDAGIYSCVASNDVGTRTATMNFQVVESH 283
Score = 87.7 bits (217), Expect = 1e-18
Identities = 35/215 (16%), Positives = 65/215 (30%), Gaps = 18/215 (8%)
Query: 90 KPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLH 149
P +LVV G+ +TL+C + G+ W E+ G L
Sbjct: 4 APVIEPSGPELVVEPGETVTLRCVSNGSV----EWDGPISPYW---TLDPESPGST--LT 54
Query: 150 FNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRI-DRMPNALYIPEGDNTKVK-IFY 207
T + G Y C T+ + + P + + + + EG + +
Sbjct: 55 TRNATFKNTGTYRCTELEDPMAGSTTIHLYVKDPAHSWNLLAQEVTVVEGQEAVLPCLIT 114
Query: 208 AGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYT-VNLSNSSGSVS 266
VSL + G + I I++ + D+ Y + N S S
Sbjct: 115 DPALKDSVSLMREGGRQVLRKT-VYFFSPWRGFI-IRKAKVLDSNTYVCKTMVNGRESTS 172
Query: 267 GTFTINITGLPGPP----IGPLDVSEITKHTCTLH 297
+ + + P + P + I +
Sbjct: 173 TGIWLKVNRVHPEPPQIKLEPSKLVRIRGEAAQIV 207
Score = 87.7 bits (217), Expect = 1e-18
Identities = 35/215 (16%), Positives = 65/215 (30%), Gaps = 18/215 (8%)
Query: 1697 KPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLH 1756
P +LVV G+ +TL+C + G+ W E+ G L
Sbjct: 4 APVIEPSGPELVVEPGETVTLRCVSNGSV----EWDGPISPYW---TLDPESPGST--LT 54
Query: 1757 FNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRI-DRMPNALYIPEGDNTKVK-IFY 1814
T + G Y C T+ + + P + + + + EG + +
Sbjct: 55 TRNATFKNTGTYRCTELEDPMAGSTTIHLYVKDPAHSWNLLAQEVTVVEGQEAVLPCLIT 114
Query: 1815 AGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYT-VNLSNSSGSVS 1873
VSL + G + I I++ + D+ Y + N S S
Sbjct: 115 DPALKDSVSLMREGGRQVLRKT-VYFFSPWRGFI-IRKAKVLDSNTYVCKTMVNGRESTS 172
Query: 1874 GTFTINITGLPGPP----IGPLDVSEITKHTCTLH 1904
+ + + P + P + I +
Sbjct: 173 TGIWLKVNRVHPEPPQIKLEPSKLVRIRGEAAQIV 207
Score = 86.5 bits (214), Expect = 3e-18
Identities = 29/198 (14%), Positives = 64/198 (32%), Gaps = 11/198 (5%)
Query: 85 FVGGEKPDFIVPLKDLVVPLGKLLTLQCEATG-TPVPKCRWLRNGREISSGARYRVETAG 143
+V + + +++ V G+ L C T +R G +
Sbjct: 84 YVKDPAHSWNLLAQEVTVVEGQEAVLPCLITDPALKDSVSLMREGGRQVLRKTVYFFSPW 143
Query: 144 GVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSS-----RVKIGTPPRIDRMPNALYIPEG 198
F + + +D+ Y C+ + + ++ PP+I P+ L G
Sbjct: 144 RGFIIR--KAKVLDSNTYVCKTMVNGRESTSTGIWLKVNRVHPEPPQIKLEPSKLVRIRG 201
Query: 199 DNTKVK-IFYAGDQPMEVSLTKNGRVVQSDDRFKFT--VLDDYIIIFIKEIRKEDAGDYT 255
+ ++ + V L + ++ F + + + +DAG Y+
Sbjct: 202 EAAQIVCSATNAEVGFNVILKRGDTKLEIPLNSDFQDNYYKKVRALSLNAVDFQDAGIYS 261
Query: 256 VNLSNSSGSVSGTFTINI 273
SN G+ + T +
Sbjct: 262 CVASNDVGTRTATMNFQV 279
Score = 86.5 bits (214), Expect = 3e-18
Identities = 29/198 (14%), Positives = 64/198 (32%), Gaps = 11/198 (5%)
Query: 1692 FVGGEKPDFIVPLKDLVVPLGKLLTLQCEATG-TPVPKCRWLRNGREISSGARYRVETAG 1750
+V + + +++ V G+ L C T +R G +
Sbjct: 84 YVKDPAHSWNLLAQEVTVVEGQEAVLPCLITDPALKDSVSLMREGGRQVLRKTVYFFSPW 143
Query: 1751 GVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSS-----RVKIGTPPRIDRMPNALYIPEG 1805
F + + +D+ Y C+ + + ++ PP+I P+ L G
Sbjct: 144 RGFIIR--KAKVLDSNTYVCKTMVNGRESTSTGIWLKVNRVHPEPPQIKLEPSKLVRIRG 201
Query: 1806 DNTKVK-IFYAGDQPMEVSLTKNGRVVQSDDRFKFT--VLDDYIIIFIKEIRKEDAGDYT 1862
+ ++ + V L + ++ F + + + +DAG Y+
Sbjct: 202 EAAQIVCSATNAEVGFNVILKRGDTKLEIPLNSDFQDNYYKKVRALSLNAVDFQDAGIYS 261
Query: 1863 VNLSNSSGSVSGTFTINI 1880
SN G+ + T +
Sbjct: 262 CVASNDVGTRTATMNFQV 279
Score = 84.6 bits (209), Expect = 1e-17
Identities = 33/200 (16%), Positives = 61/200 (30%), Gaps = 18/200 (9%)
Query: 480 APEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLI 539
AP I +C G ++ W I+P E TL
Sbjct: 4 APVIEPSGPELVVEPGETVTLRCVSNG----SVEW---DGPISPYWTLDP--ESPGSTLT 54
Query: 540 INSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPK-FNVPPRFRDTAYFDKGENVVVKI 598
+ + Y C + ST L + +N+ + +G+ V+
Sbjct: 55 TRNATFKNTGTYRCTELEDPMAGSTTIHLYVKDPAHSWNLLAQ---EVTVVEGQEAVLPC 111
Query: 599 PFTGY-PKPKITWYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAPYRVVAEND-LG 656
T K ++ R+ + + R IR A +D+ Y +
Sbjct: 112 LITDPALKDSVSLMREGGRQVLRKTVYFFSPWRG--FIIRKAKVLDSNTYVCKTMVNGRE 169
Query: 657 MDSAIVKIQISDR-PDPPQF 675
S + ++++ P+PPQ
Sbjct: 170 STSTGIWLKVNRVHPEPPQI 189
Score = 80.4 bits (198), Expect = 4e-16
Identities = 26/104 (25%), Positives = 37/104 (35%), Gaps = 3/104 (2%)
Query: 86 VGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGR---EISSGARYRVETA 142
V E P + LV G+ + C AT V L+ G EI + ++
Sbjct: 182 VHPEPPQIKLEPSKLVRIRGEAAQIVCSATNAEVGFNVILKRGDTKLEIPLNSDFQDNYY 241
Query: 143 GGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRI 186
V L N V D G Y+C A N VG + ++
Sbjct: 242 KKVRALSLNAVDFQDAGIYSCVASNDVGTRTATMNFQVVESHHH 285
Score = 80.4 bits (198), Expect = 4e-16
Identities = 26/104 (25%), Positives = 37/104 (35%), Gaps = 3/104 (2%)
Query: 1693 VGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGR---EISSGARYRVETA 1749
V E P + LV G+ + C AT V L+ G EI + ++
Sbjct: 182 VHPEPPQIKLEPSKLVRIRGEAAQIVCSATNAEVGFNVILKRGDTKLEIPLNSDFQDNYY 241
Query: 1750 GGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRI 1793
V L N V D G Y+C A N VG + ++
Sbjct: 242 KKVRALSLNAVDFQDAGIYSCVASNDVGTRTATMNFQVVESHHH 285
Score = 75.8 bits (186), Expect = 1e-14
Identities = 24/124 (19%), Positives = 39/124 (31%), Gaps = 6/124 (4%)
Query: 2061 AQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTIS 2120
S + V P + P+I + I+ AQ C+ T
Sbjct: 163 TMVNGRESTSTGIWLKVNRVHP---EPPQIKLEPSKLVRIRGEAAQIVCSATNAEVGFNV 219
Query: 2121 WLK---GSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELII 2177
LK EI ++ L +N+V DA Y C A N G ++ +
Sbjct: 220 ILKRGDTKLEIPLNSDFQDNYYKKVRALSLNAVDFQDAGIYSCVASNDVGTRTATMNFQV 279
Query: 2178 MTAP 2181
+ +
Sbjct: 280 VESH 283
Score = 72.7 bits (178), Expect = 2e-13
Identities = 23/151 (15%), Positives = 49/151 (32%), Gaps = 15/151 (9%)
Query: 2060 YAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGC-PKPT 2118
+ S + + +KDP A + + ++ A C IT K +
Sbjct: 69 TELEDPM---AGSTTIHLYVKDP----AHSWNLLAQEVTVVEGQEAVLPCLITDPALKDS 121
Query: 2119 ISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIM 2178
+S ++ + F+ II +D++ YVC+ + G ++ + +
Sbjct: 122 VSLMREGGRQVLRKTVYFFSPWRG--FIIRKAKVLDSNTYVCKTMVNGRESTS-TGIWLK 178
Query: 2179 TAPKFNVPPRF----RDTAYFESDVVVVVCV 2205
PP+ + +VC
Sbjct: 179 VNRVHPEPPQIKLEPSKLVRIRGEAAQIVCS 209
Score = 58.8 bits (142), Expect = 6e-09
Identities = 23/127 (18%), Positives = 44/127 (34%), Gaps = 6/127 (4%)
Query: 1108 VCAVNAAGQGPWSSSSDIIMCCAPPCAPKITSDLSIRDMTVLAGEEFTITVPFSGRPKPT 1167
VC G+ S+ + + P P+I + S + + GE I +
Sbjct: 160 VCKTMVNGRESTSTGIWLKVNRVHPEPPQIKLEPS--KLVRIRGEAAQIVCSATNAEVGF 217
Query: 1168 PIWTVNGD---EVSPDGRIKFETSENQTIYRNKSAKRATDSGSYTIQLVNTVGSDSASCK 1224
+ GD E+ + + + + D+G Y+ N VG+ +A+
Sbjct: 218 NVILKRGDTKLEIPLNSDFQDNYYKKVRALSLNAV-DFQDAGIYSCVASNDVGTRTATMN 276
Query: 1225 VYVVDKP 1231
VV+
Sbjct: 277 FQVVESH 283
Score = 52.6 bits (126), Expect = 6e-07
Identities = 20/119 (16%), Positives = 33/119 (27%), Gaps = 12/119 (10%)
Query: 2087 APEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLI 2146
AP I +C G ++ W I+P E TL
Sbjct: 4 APVIEPSGPELVVEPGETVTLRCVSNG----SVEW---DGPISPYWTLDP--ESPGSTLT 54
Query: 2147 INSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPK-FNVPPRFRDTAYFESDVVVVVC 2204
+ + Y C + ST L + +N+ ++ E V+ C
Sbjct: 55 TRNATFKNTGTYRCTELEDPMAGSTTIHLYVKDPAHSWNLLA--QEVTVVEGQEAVLPC 111
Score = 49.9 bits (119), Expect = 4e-06
Identities = 29/190 (15%), Positives = 48/190 (25%), Gaps = 26/190 (13%)
Query: 1324 TAKFPFTVPDPPGQPQIVDWDTNNATLMWDRPRTDGGSKIQGYKMLLKTPTGELPTTIWS 1383
A P + DP + + R +GG ++ + +P I
Sbjct: 106 EAVLPCLITDPALKDSVS----------LMR---EGGRQVLRKTVYFFSPWRGF--II-R 149
Query: 1384 KIRPTSSTVY-CKDTTMNSSNSEPGKQSGPVI--VEEQPNKPVMDLSGVRDITVKAGEDF 1440
K + S Y CK + + S + V +P + GE
Sbjct: 150 KAKVLDSNTYVCK-----TMVNGRESTSTGIWLKVNRVHPEPPQIKLEPSKLVRIRGEAA 204
Query: 1441 SIHVPFMAFPQPAAFWFANDS--IIDDSDTRVHKQLTMNSASLVVKNSQRSDGGQYRLQL 1498
I + ++ +L + D G Y
Sbjct: 205 QIVCSATNAEVGFNVILKRGDTKLEIPLNSDFQDNYYKKVRALSLNAVDFQDAGIYSCVA 264
Query: 1499 KNPAGFDTAT 1508
N G TAT
Sbjct: 265 SNDVGTRTAT 274
Score = 39.9 bits (93), Expect = 0.007
Identities = 29/164 (17%), Positives = 52/164 (31%), Gaps = 34/164 (20%)
Query: 1130 APPCAPKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSE 1189
A P AP I ++ V GE T+ +G + W SP + E+
Sbjct: 1 ADP-APVIEPSGP--ELVVEPGETVTLRCVSNG----SVEWDGPI---SPYWTLDPESPG 50
Query: 1190 NQ-TIYRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYVVDKPSP-PQGPLD-------- 1239
+ T ++G+Y + + S + +YV D +
Sbjct: 51 STLTTRN----ATFKNTGTYRCTELEDPMAGSTTIHLYVKDPAHSWNLLAQEVTVVEGQE 106
Query: 1240 ------VSDITPESCSLSWKPPLDDGGSPITNYVVEKYESATGF 1277
++D + S+S +GG + V + GF
Sbjct: 107 AVLPCLITDPALKD-SVSLMR---EGGRQVLRKTVYFFSPWRGF 146
Score = 31.1 bits (70), Expect = 3.6
Identities = 17/99 (17%), Positives = 30/99 (30%), Gaps = 21/99 (21%)
Query: 1412 PVIVEEQPNKPVMDLSGVRDITVKAGEDFSIHVPFMAFPQPAAFWFANDSIIDDSDTRVH 1471
PVI P ++ V+ GE ++ + W S D
Sbjct: 5 PVIEPSGP-----------ELVVEPGETVTLRCVSNGSVE----WDGPISPYWTLDPES- 48
Query: 1472 KQLTMNSASLVVKNSQRSDGGQYRLQLKNPAGFDTATLH 1510
++L +N+ + G YR + T+H
Sbjct: 49 -----PGSTLTTRNATFKNTGTYRCTELEDPMAGSTTIH 82
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex,
beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo
sapiens}
Length = 339
Score = 110 bits (275), Expect = 9e-26
Identities = 31/214 (14%), Positives = 64/214 (29%), Gaps = 19/214 (8%)
Query: 77 TTPVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCE-------ATGTPVPKCRWLRNG- 128
T K G+ + L+C A+ +P W +N
Sbjct: 5 TLQPAAHTGAARSCRFRGRHYKREFRLEGEPVALRCPQVPYWLWASVSPRINLTWHKNDS 64
Query: 129 -REISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRID 187
R + R+ G L D+G Y C N+ S +++
Sbjct: 65 ARTVPGEEETRMWAQDGA--LWLLPALQEDSGTYVCTTRNASYCDKMSIELRVFENTDAF 122
Query: 188 R--MPNALYIPEGDNTKV-----KIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYII 240
+ + + + F +++ K+ ++ D+ +V +
Sbjct: 123 LPFISYPQILTLSTSGVLVCPDLSEFTRDKTDVKIQWYKDSLLLDKDNEKFLSVRGTTHL 182
Query: 241 IFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINIT 274
+ + ++ EDAG Y L+ + T +I
Sbjct: 183 L-VHDVALEDAGYYRCVLTFAHEGQQYNITRSIE 215
Score = 110 bits (275), Expect = 9e-26
Identities = 31/214 (14%), Positives = 64/214 (29%), Gaps = 19/214 (8%)
Query: 1684 TTPVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCE-------ATGTPVPKCRWLRNG- 1735
T K G+ + L+C A+ +P W +N
Sbjct: 5 TLQPAAHTGAARSCRFRGRHYKREFRLEGEPVALRCPQVPYWLWASVSPRINLTWHKNDS 64
Query: 1736 -REISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRID 1794
R + R+ G L D+G Y C N+ S +++
Sbjct: 65 ARTVPGEEETRMWAQDGA--LWLLPALQEDSGTYVCTTRNASYCDKMSIELRVFENTDAF 122
Query: 1795 R--MPNALYIPEGDNTKV-----KIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYII 1847
+ + + + F +++ K+ ++ D+ +V +
Sbjct: 123 LPFISYPQILTLSTSGVLVCPDLSEFTRDKTDVKIQWYKDSLLLDKDNEKFLSVRGTTHL 182
Query: 1848 IFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINIT 1881
+ + ++ EDAG Y L+ + T +I
Sbjct: 183 L-VHDVALEDAGYYRCVLTFAHEGQQYNITRSIE 215
Score = 109 bits (273), Expect = 1e-25
Identities = 31/230 (13%), Positives = 56/230 (24%), Gaps = 20/230 (8%)
Query: 464 SSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTI-------TGCPKPTISWLK 516
+ A + ++ +C + P+ ++W K
Sbjct: 2 DPFTLQPAAHTGAARSCRFRGRHYKREFRLEGEPVALRCPQVPYWLWASVSPRINLTWHK 61
Query: 517 GSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKF 576
T L + D+ YVC N EL +
Sbjct: 62 NDSARTVPGEEETRMWAQDGALWLLPALQEDSGTYVCTTRNASYCDKMSIELRVFENTDA 121
Query: 577 NVPPRFRDTAYFDKGENVVVKIP-----FTGYPKPKITWYRDNEVIESGGHFHVETSERH 631
P + V+ P KI WY+D+ +++ +
Sbjct: 122 -FLPFISYPQILTLSTSGVLVCPDLSEFTRDKTDVKIQWYKDSLLLDKDNE-KFLSVRGT 179
Query: 632 AILTIRDASNVDTAPYRVVAENDLGMD------SAIVKIQISDRPDPPQF 675
L + D + D YR V S ++I+ P
Sbjct: 180 THLLVHDVALEDAGYYRCVLTFAHEGQQYNITRSIELRIKKKKEETIPVI 229
Score = 100 bits (250), Expect = 2e-22
Identities = 35/237 (14%), Positives = 63/237 (26%), Gaps = 29/237 (12%)
Query: 454 AQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVP--LRNANAIQNHNAQFQCTITGCPKPT 511
+N + S +++ + A P I P L + +
Sbjct: 100 TRNASYCD---KMSIELRVFENTDAFLPFISYPQILTLSTSGVLVCPDLSEFTRDKTDVK 156
Query: 512 ISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELII- 570
I W K S + + G T L+++ V DA Y C + I
Sbjct: 157 IQWYKDSLLLDKDNEKFLSVRGTT-HLLVHDVALEDAGYYRCVLTFAHEGQQYNITRSIE 215
Query: 571 --MTAPKFNVPPRF---RDTAYFDKGENVVVK---IPFTGYPKPKITWYRDNEV------ 616
+ K P T G + + TG P + W+ N+
Sbjct: 216 LRIKKKKEETIPVIISPLKTISASLGSRLTIPCKVFLGTGTPLTTMLWWTANDTHIESAY 275
Query: 617 ----IESGGHFHVETSER---HAILTIRDASNVDT-APYRVVAENDLGMDSAIVKIQ 665
+ G + L + D ++ V N L + ++
Sbjct: 276 PGGRVTEGPRQEYSENNENYIEVPLIFDPVTREDLHMDFKCVVHNTLSFQTLRTTVK 332
Score = 73.6 bits (180), Expect = 1e-13
Identities = 31/135 (22%), Positives = 51/135 (37%), Gaps = 18/135 (13%)
Query: 63 IAVNAIGKSEPSI-CTTPVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEA---TGTP 118
+ A + +I + ++I + P I PLK + LG LT+ C+ TGTP
Sbjct: 198 VLTFAHEGQQYNITRSIELRIKKKKEETIPVIISPLKTISASLGSRLTIPCKVFLGTGTP 257
Query: 119 VPKCRWLRNG----------REISSGARYRVETAGGVF---RLHFNEVTDVDNG-DYTCE 164
+ W ++ G R + L F+ VT D D+ C
Sbjct: 258 LTTMLWWTANDTHIESAYPGGRVTEGPRQEYSENNENYIEVPLIFDPVTREDLHMDFKCV 317
Query: 165 AYNSVGFAHTSSRVK 179
+N++ F + VK
Sbjct: 318 VHNTLSFQTLRTTVK 332
Score = 73.6 bits (180), Expect = 1e-13
Identities = 31/135 (22%), Positives = 51/135 (37%), Gaps = 18/135 (13%)
Query: 1670 IAVNAIGKSEPSI-CTTPVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEA---TGTP 1725
+ A + +I + ++I + P I PLK + LG LT+ C+ TGTP
Sbjct: 198 VLTFAHEGQQYNITRSIELRIKKKKEETIPVIISPLKTISASLGSRLTIPCKVFLGTGTP 257
Query: 1726 VPKCRWLRNG----------REISSGARYRVETAGGVF---RLHFNEVTDVDNG-DYTCE 1771
+ W ++ G R + L F+ VT D D+ C
Sbjct: 258 LTTMLWWTANDTHIESAYPGGRVTEGPRQEYSENNENYIEVPLIFDPVTREDLHMDFKCV 317
Query: 1772 AYNSVGFAHTSSRVK 1786
+N++ F + VK
Sbjct: 318 VHNTLSFQTLRTTVK 332
Score = 72.4 bits (177), Expect = 3e-13
Identities = 20/155 (12%), Positives = 34/155 (21%), Gaps = 7/155 (4%)
Query: 2071 SSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTI-------TGCPKPTISWLK 2123
+ A + ++ +C + P+ ++W K
Sbjct: 2 DPFTLQPAAHTGAARSCRFRGRHYKREFRLEGEPVALRCPQVPYWLWASVSPRINLTWHK 61
Query: 2124 GSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKF 2183
T L + D+ YVC N EL +
Sbjct: 62 NDSARTVPGEEETRMWAQDGALWLLPALQEDSGTYVCTTRNASYCDKMSIELRVFENTDA 121
Query: 2184 NVPPRFRDTAYFESDVVVVVCVCFFLMIRRPPRST 2218
+P S V+VC R
Sbjct: 122 FLPFISYPQILTLSTSGVLVCPDLSEFTRDKTDVK 156
Score = 69.3 bits (169), Expect = 3e-12
Identities = 22/134 (16%), Positives = 37/134 (27%), Gaps = 9/134 (6%)
Query: 2061 AQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVP--LRNANAIQNHNAQFQCTITGCPKPT 2118
+N + S +++ + A P I P L + +
Sbjct: 100 TRNASYCD---KMSIELRVFENTDAFLPFISYPQILTLSTSGVLVCPDLSEFTRDKTDVK 156
Query: 2119 ISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELII- 2177
I W K S + + G T L+++ V DA Y C + I
Sbjct: 157 IQWYKDSLLLDKDNEKFLSVRGTT-HLLVHDVALEDAGYYRCVLTFAHEGQQYNITRSIE 215
Query: 2178 --MTAPKFNVPPRF 2189
+ K P
Sbjct: 216 LRIKKKKEETIPVI 229
Score = 63.6 bits (154), Expect = 2e-10
Identities = 24/134 (17%), Positives = 41/134 (30%), Gaps = 20/134 (14%)
Query: 2061 AQNEAGLSLPSSASNSVQ--IKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTI---TGCP 2115
+ + S++ IK P II PL+ +A C + TG P
Sbjct: 199 LTFAHE-GQQYNITRSIELRIKKKKEETIPVIISPLKTISASLGSRLTIPCKVFLGTGTP 257
Query: 2116 KPTISWLKG----------SREITPSARHHIFAEGDTY---TLIINSVYGVDA-DEYVCR 2161
T+ W +T R + Y LI + V D ++ C
Sbjct: 258 LTTMLWWTANDTHIESAYPGGRVTEGPRQEYSENNENYIEVPLIFDPVTREDLHMDFKCV 317
Query: 2162 AVNKGGVKSTKAEL 2175
N ++ + +
Sbjct: 318 VHNTLSFQTLRTTV 331
Score = 48.5 bits (115), Expect = 2e-05
Identities = 19/101 (18%), Positives = 27/101 (26%), Gaps = 18/101 (17%)
Query: 1145 DMTVLAGEEFTITVPF-------SGRPKPTPIWTVNGDEVSPDGRIKFETSENQTIYRNK 1197
L GE + P S P+ W N E ++
Sbjct: 27 REFRLEGEPVALRCPQVPYWLWASVSPRINLTWHKND------SARTVPGEEETRMWAQD 80
Query: 1198 SA---KRAT--DSGSYTIQLVNTVGSDSASCKVYVVDKPSP 1233
A A DSG+Y N D S ++ V +
Sbjct: 81 GALWLLPALQEDSGTYVCTTRNASYCDKMSIELRVFENTDA 121
Score = 47.0 bits (111), Expect = 4e-05
Identities = 19/132 (14%), Positives = 37/132 (28%), Gaps = 13/132 (9%)
Query: 1408 KQSGPVIVEEQPNKPVMDLSGVRDITVKAGEDFSIHVPFM-----AFPQPAAFWFANDSI 1462
K S + V E + + P + W+ + +
Sbjct: 108 KMSIELRVFENT--DAFLPFISYPQILTLSTSGVLVCPDLSEFTRDKTDVKIQWYKDSLL 165
Query: 1463 IDDSDTRVHKQLTMNSASLVVKNSQRSDGGQYRLQLKNPAGFD----TATLHSRLRTLPD 1518
+D + + + L+V + D G YR L T ++ R++ +
Sbjct: 166 LDKDNEKFL--SVRGTTHLLVHDVALEDAGYYRCVLTFAHEGQQYNITRSIELRIKKKKE 223
Query: 1519 SVNPRCHLPSST 1530
P P T
Sbjct: 224 ETIPVIISPLKT 235
Score = 46.2 bits (109), Expect = 8e-05
Identities = 13/137 (9%), Positives = 30/137 (21%), Gaps = 19/137 (13%)
Query: 1110 AVNAAGQGPWSSSSDIIMCCAPPCAPKITSDLSIRDMTVLAGEEFTITVP-----FSGRP 1164
NA+ S ++ + S + + P +
Sbjct: 100 TRNASYC--DKMSIELRVFENTDAFLPFIS----YPQILTLSTSGVLVCPDLSEFTRDKT 153
Query: 1165 KPTPIWTVNGDEVSPDGRIKFETSENQTIYRNKSAKRATDSGSYTIQLVNTVGSDSASC- 1223
W + + D + + A D+G Y L +
Sbjct: 154 DVKIQWYKDSLLLDKDNEKFLSVRGTTHLLVHDVAL--EDAGYYRCVLTFAHEGQQYNIT 211
Query: 1224 -----KVYVVDKPSPPQ 1235
++ + + P
Sbjct: 212 RSIELRIKKKKEETIPV 228
Score = 44.3 bits (104), Expect = 3e-04
Identities = 22/138 (15%), Positives = 38/138 (27%), Gaps = 22/138 (15%)
Query: 1108 VC-AVNAAGQGPWSSSSDI---IMCCAPPCAPKITSDLSIRDMTVLAGEEFTIT---VPF 1160
C A ++ + I I P I S L ++ G TI
Sbjct: 196 RCVLTFAHEGQQYNITRSIELRIKKKKEETIPVIISPLK--TISASLGSRLTIPCKVFLG 253
Query: 1161 SGRPKPTPIWTVNG----DEVSPDGRIKFETSENQTIYRNKSAK--------RATDSGS- 1207
+G P T +W + P GR+ + + + D
Sbjct: 254 TGTPLTTMLWWTANDTHIESAYPGGRVTEGPRQEYSENNENYIEVPLIFDPVTREDLHMD 313
Query: 1208 YTIQLVNTVGSDSASCKV 1225
+ + NT+ + V
Sbjct: 314 FKCVVHNTLSFQTLRTTV 331
Score = 41.6 bits (97), Expect = 0.002
Identities = 18/114 (15%), Positives = 36/114 (31%), Gaps = 17/114 (14%)
Query: 1413 VIVEEQPNKPVMDLSGVRDITVKAGEDFSIH---VPFMAFPQPAAFWF-ANDSIIDDSDT 1468
+ +++ PV+ +S ++ I+ G +I P W+ AND+ I+ +
Sbjct: 218 IKKKKEETIPVI-ISPLKTISASLGSRLTIPCKVFLGTGTPLTTMLWWTANDTHIESAYP 276
Query: 1469 RVH-----------KQLTMNSASLVVKNSQRSD-GGQYRLQLKNPAGFDTATLH 1510
L+ R D ++ + N F T
Sbjct: 277 GGRVTEGPRQEYSENNENYIEVPLIFDPVTREDLHMDFKCVVHNTLSFQTLRTT 330
Score = 40.8 bits (95), Expect = 0.004
Identities = 12/122 (9%), Positives = 38/122 (31%), Gaps = 7/122 (5%)
Query: 175 SSRVKIGTPPRIDRMPNALYIPEGDNTKVK-------IFYAGDQPMEVSLTKNGRVVQSD 227
+ + R + EG+ ++ ++ + + ++ KN
Sbjct: 10 AHTGAARSCRFRGRHYKREFRLEGEPVALRCPQVPYWLWASVSPRINLTWHKNDSARTVP 69
Query: 228 DRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPIGPLDVS 287
+ + +++ +ED+G Y N+S + + + + +
Sbjct: 70 GEEETRMWAQDGALWLLPALQEDSGTYVCTTRNASYCDKMSIELRVFENTDAFLPFISYP 129
Query: 288 EI 289
+I
Sbjct: 130 QI 131
Score = 40.8 bits (95), Expect = 0.004
Identities = 12/122 (9%), Positives = 38/122 (31%), Gaps = 7/122 (5%)
Query: 1782 SSRVKIGTPPRIDRMPNALYIPEGDNTKVK-------IFYAGDQPMEVSLTKNGRVVQSD 1834
+ + R + EG+ ++ ++ + + ++ KN
Sbjct: 10 AHTGAARSCRFRGRHYKREFRLEGEPVALRCPQVPYWLWASVSPRINLTWHKNDSARTVP 69
Query: 1835 DRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPIGPLDVS 1894
+ + +++ +ED+G Y N+S + + + + +
Sbjct: 70 GEEETRMWAQDGALWLLPALQEDSGTYVCTTRNASYCDKMSIELRVFENTDAFLPFISYP 129
Query: 1895 EI 1896
+I
Sbjct: 130 QI 131
Score = 40.4 bits (94), Expect = 0.005
Identities = 17/100 (17%), Positives = 34/100 (34%), Gaps = 8/100 (8%)
Query: 1431 DITVKAGEDFSIHVPFMAF-------PQPAAFWFANDSIIDDSDTRVHKQLTMNSASLVV 1483
GE ++ P + + P+ W NDS ++ +L +
Sbjct: 27 REFRLEGEPVALRCPQVPYWLWASVSPRINLTWHKNDSARTVP-GEEETRMWAQDGALWL 85
Query: 1484 KNSQRSDGGQYRLQLKNPAGFDTATLHSRLRTLPDSVNPR 1523
+ + D G Y +N + D ++ R+ D+ P
Sbjct: 86 LPALQEDSGTYVCTTRNASYCDKMSIELRVFENTDAFLPF 125
>1x5f_A Neogenin; RGM binding, fibronectin type III domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
b.1.2.1
Length = 120
Score = 102 bits (257), Expect = 1e-25
Identities = 22/112 (19%), Positives = 37/112 (33%), Gaps = 2/112 (1%)
Query: 656 GMDSAIVKIQISDRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSS 715
G P P+ + + L WR P D + Y V + ++
Sbjct: 4 GSSGEHAPATTGPLPSAPRDVVASLVSTRFIKLTWRTPASDPHGDNLTYSVFYTKEGIAR 63
Query: 716 W--IRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKDT 765
+ + I L P Y FRV A+N +G + S + T ++
Sbjct: 64 ERVENTSHPGEMQVTIQNLMPATVYIFRVMAQNKHGSGESSAPLRVETQPES 115
Score = 101 bits (253), Expect = 4e-25
Identities = 23/123 (18%), Positives = 39/123 (31%), Gaps = 8/123 (6%)
Query: 1217 GSDSASCKVYVVDKPSPPQGPLDVSDITPESCSLSWKPPLDDGGSPITNYVVEKYESATG 1276
GS PS P+ + S ++ L+W+ P D Y V +
Sbjct: 4 GSSGEHAPATTGPLPSAPRD-VVASLVSTRFIKLTWRTPASDPHGDNLTYSVFYTKEGIA 62
Query: 1277 FWSKLSSF-VRSPAYDVFGLETNRQYRFRVRAENQYGVSEPLELDNSITAKFPFTVPDPP 1335
++ + L Y FRV A+N++G E + + T P+
Sbjct: 63 RERVENTSHPGEMQVTIQNLMPATVYIFRVMAQNKHGSGESSA---PLRVE---TQPESG 116
Query: 1336 GQP 1338
Sbjct: 117 PSS 119
Score = 101 bits (253), Expect = 4e-25
Identities = 26/92 (28%), Positives = 37/92 (40%)
Query: 376 DKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPS 435
PS P V + V F+ L+W P D Y + + G + N +
Sbjct: 16 PLPSAPRDVVASLVSTRFIKLTWRTPASDPHGDNLTYSVFYTKEGIARERVENTSHPGEM 75
Query: 436 QINIPNLIEGRQYEFRVYAQNEAGLSLPSSAS 467
Q+ I NL+ Y FRV AQN+ G S+
Sbjct: 76 QVTIQNLMPATVYIFRVMAQNKHGSGESSAPL 107
Score = 101 bits (253), Expect = 4e-25
Identities = 26/92 (28%), Positives = 37/92 (40%)
Query: 1983 DKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPS 2042
PS P V + V F+ L+W P D Y + + G + N +
Sbjct: 16 PLPSAPRDVVASLVSTRFIKLTWRTPASDPHGDNLTYSVFYTKEGIARERVENTSHPGEM 75
Query: 2043 QINIPNLIEGRQYEFRVYAQNEAGLSLPSSAS 2074
Q+ I NL+ Y FRV AQN+ G S+
Sbjct: 76 QVTIQNLMPATVYIFRVMAQNKHGSGESSAPL 107
Score = 97.1 bits (242), Expect = 1e-23
Identities = 22/118 (18%), Positives = 43/118 (36%), Gaps = 4/118 (3%)
Query: 890 DEMVLIFEVLDRPHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWT 949
P P ++ A + + L W P + + Y V
Sbjct: 6 SGEHAPATTGPLPSAPRDVVASLVSTRFIKLTWRTPASDPHGDNLTYSVFYTKEGIARER 65
Query: 950 KV-SSYVTTPFVRVRNLAIGSTYEFRVMAENQYGLSKPALTIDPIKAKHPFDVPGAPG 1006
+S+ V ++NL + Y FRVMA+N++G + + P++ + + + G
Sbjct: 66 VENTSHPGEMQVTIQNLMPATVYIFRVMAQNKHGSGESS---APLRVETQPESGPSSG 120
Score = 96.3 bits (240), Expect = 2e-23
Identities = 26/123 (21%), Positives = 43/123 (34%), Gaps = 5/123 (4%)
Query: 261 SSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDIS 320
SSGS LP P + S ++ L W P D Y V
Sbjct: 2 SSGSSGEHAPATTGPLPSAPRD-VVASLVSTRFIKLTWRTPASDPHGDNLTYSVFYTKEG 60
Query: 321 MPHW-ICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPS 379
+ + ++ + +Q L Y+F VMA N++G G P++ ++ +
Sbjct: 61 IARERVENTSHPGEMQVTIQNLMPATVYIFRVMAQNKHGSGESSA---PLRVETQPESGP 117
Query: 380 PPG 382
G
Sbjct: 118 SSG 120
Score = 96.3 bits (240), Expect = 2e-23
Identities = 26/123 (21%), Positives = 43/123 (34%), Gaps = 5/123 (4%)
Query: 1868 SSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDIS 1927
SSGS LP P + S ++ L W P D Y V
Sbjct: 2 SSGSSGEHAPATTGPLPSAPRD-VVASLVSTRFIKLTWRTPASDPHGDNLTYSVFYTKEG 60
Query: 1928 MPHW-ICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPS 1986
+ + ++ + +Q L Y+F VMA N++G G P++ ++ +
Sbjct: 61 IARERVENTSHPGEMQVTIQNLMPATVYIFRVMAQNKHGSGESSA---PLRVETQPESGP 117
Query: 1987 PPG 1989
G
Sbjct: 118 SSG 120
Score = 89.8 bits (223), Expect = 5e-21
Identities = 21/127 (16%), Positives = 33/127 (25%), Gaps = 32/127 (25%)
Query: 1000 DVPGAPGAPKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDT 1059
+P AP + I L W P D Y V + + +H +
Sbjct: 16 PLPSAPRDVVASLVSTRFIKLTWRTPASDPHGDNLTYSVFYTKEGIARERVENTSHPGEM 75
Query: 1060 SLKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPW 1119
+ + +L+ Y FRV A N G G
Sbjct: 76 QV--------------------------------TIQNLMPATVYIFRVMAQNKHGSGES 103
Query: 1120 SSSSDII 1126
S+ +
Sbjct: 104 SAPLRVE 110
Score = 65.1 bits (159), Expect = 2e-12
Identities = 19/125 (15%), Positives = 27/125 (21%), Gaps = 45/125 (36%)
Query: 1557 KGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVS 1616
+ I L W P D Y V +
Sbjct: 25 VASLVSTRFIKLTWRTPASDPHGDNLTYSVFYTKEGIARER------------------- 65
Query: 1617 EGKSIGSERGSTAQFLEREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIG 1676
N + E ++ NL+ Y FR++A N G
Sbjct: 66 --------------------------VENTSHPGEMQVTIQNLMPATVYIFRVMAQNKHG 99
Query: 1677 KSEPS 1681
E S
Sbjct: 100 SGESS 104
Score = 57.8 bits (140), Expect = 8e-10
Identities = 15/53 (28%), Positives = 23/53 (43%)
Query: 22 YIIERREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPS 74
Y + + G A N + E ++ NL+ Y FR++A N G E S
Sbjct: 52 YSVFYTKEGIARERVENTSHPGEMQVTIQNLMPATVYIFRVMAQNKHGSGESS 104
Score = 47.4 bits (113), Expect = 3e-06
Identities = 20/102 (19%), Positives = 30/102 (29%), Gaps = 10/102 (9%)
Query: 1330 TVPDPPGQPQIVDWDTNNATLMWDRPRTDGGSKIQGYKMLLKTPTGELPTTIWSKIRPTS 1389
+P P T L W P +D Y + T G + + P
Sbjct: 16 PLPSAPRDVVASLVSTRFIKLTWRTPASDPHGDNLTYS-VFYTKEGIARERVENTSHPGE 74
Query: 1390 STVYCKDTTMNSS--------NSE-PGKQSGPVIVEEQPNKP 1422
V ++ + N G+ S P+ VE QP
Sbjct: 75 MQVTIQNLMPATVYIFRVMAQNKHGSGESSAPLRVETQPESG 116
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix
bundle cytokine, receptor tyrosine kinase glycosylation;
HET: NAG BMA; 3.00A {Homo sapiens}
Length = 292
Score = 108 bits (271), Expect = 1e-25
Identities = 38/245 (15%), Positives = 74/245 (30%), Gaps = 21/245 (8%)
Query: 435 SQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQ 494
S ++ N +R + SA+ + +KDP A V + +
Sbjct: 51 SILSTNNATFQNTGTYRCTEPGDPL---GGSAAIHLYVKDP----ARPWNVLAQEVVVFE 103
Query: 495 NHNAQFQCTITGC-PKPTISWLK-GSREITPSARHHIFAEGDTYTLIINSVYGVDADEYV 552
+ +A C +T + +S ++ R + + I+ + + +Y
Sbjct: 104 DQDALLPCLLTDPVLEAGVSLVRVRGRPLMRHTNYSFSPWH---GFTIHRAKFIQSQDYQ 160
Query: 553 CRAVNKGG-VKSTKAELIIMTAPKFNVPPRFRDTA---YFDKGENVVVKIPFTGYPKPKI 608
C A+ G V S L + PP +GE + +
Sbjct: 161 CSALMGGRKVMSISIRLKVQKVI--PGPPALTLVPAELVRIRGEAAQIVCSASSVDVNFD 218
Query: 609 TWYRDNE---VIESGGHFHVETSERHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQ 665
+ + N I FH ++ L + Y VA N G S + +
Sbjct: 219 VFLQHNNTKLAIPQQSDFHNNRYQKVLTLNLDQVDFQHAGNYSCVASNVQGKHSTSMFFR 278
Query: 666 ISDRP 670
+ +
Sbjct: 279 VVESA 283
Score = 95.4 bits (237), Expect = 3e-21
Identities = 36/204 (17%), Positives = 69/204 (33%), Gaps = 13/204 (6%)
Query: 85 FVGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPV-PKCRWLR-NGREISSGARYRVETA 142
+V + V +++VV + L C T + +R GR + Y
Sbjct: 84 YVKDPARPWNVLAQEVVVFEDQDALLPCLLTDPVLEAGVSLVRVRGRPLMRHTNYSFSPW 143
Query: 143 GGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSS-----RVKIGTPPRIDRMPNALYIPE 197
G + + + DY C A + S + I PP + +P L
Sbjct: 144 HG---FTIHRAKFIQSQDYQCSALMGGRKVMSISIRLKVQKVIPGPPALTLVPAELVRIR 200
Query: 198 GDNTKVK-IFYAGDQPMEVSLTKNGRVVQSDDRFKF--TVLDDYIIIFIKEIRKEDAGDY 254
G+ ++ + D +V L N + + F + + + ++ + AG+Y
Sbjct: 201 GEAAQIVCSASSVDVNFDVFLQHNNTKLAIPQQSDFHNNRYQKVLTLNLDQVDFQHAGNY 260
Query: 255 TVNLSNSSGSVSGTFTINITGLPG 278
+ SN G S + + G
Sbjct: 261 SCVASNVQGKHSTSMFFRVVESAG 284
Score = 95.4 bits (237), Expect = 3e-21
Identities = 36/204 (17%), Positives = 69/204 (33%), Gaps = 13/204 (6%)
Query: 1692 FVGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPV-PKCRWLR-NGREISSGARYRVETA 1749
+V + V +++VV + L C T + +R GR + Y
Sbjct: 84 YVKDPARPWNVLAQEVVVFEDQDALLPCLLTDPVLEAGVSLVRVRGRPLMRHTNYSFSPW 143
Query: 1750 GGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSS-----RVKIGTPPRIDRMPNALYIPE 1804
G + + + DY C A + S + I PP + +P L
Sbjct: 144 HG---FTIHRAKFIQSQDYQCSALMGGRKVMSISIRLKVQKVIPGPPALTLVPAELVRIR 200
Query: 1805 GDNTKVK-IFYAGDQPMEVSLTKNGRVVQSDDRFKF--TVLDDYIIIFIKEIRKEDAGDY 1861
G+ ++ + D +V L N + + F + + + ++ + AG+Y
Sbjct: 201 GEAAQIVCSASSVDVNFDVFLQHNNTKLAIPQQSDFHNNRYQKVLTLNLDQVDFQHAGNY 260
Query: 1862 TVNLSNSSGSVSGTFTINITGLPG 1885
+ SN G S + + G
Sbjct: 261 SCVASNVQGKHSTSMFFRVVESAG 284
Score = 88.9 bits (220), Expect = 5e-19
Identities = 35/219 (15%), Positives = 69/219 (31%), Gaps = 20/219 (9%)
Query: 87 GGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVF 146
G P + +LVV G +TL+C G+ W + + + G
Sbjct: 1 AGSIPVIEPSVPELVVKPGATVTLRCVGNGSV----EWDGPPSP-----HWTLYSDGSSS 51
Query: 147 RLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRI-DRMPNALYIPEGDNTKVK- 204
L N T + G Y C + + + P R + + + + E + +
Sbjct: 52 ILSTNNATFQNTGTYRCTEPGDPLGGSAAIHLYVKDPARPWNVLAQEVVVFEDQDALLPC 111
Query: 205 IFYAGDQPMEVSLTK-NGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYT-VNLSNSS 262
+ VSL + GR + + F + I + + DY L
Sbjct: 112 LLTDPVLEAGVSLVRVRGRPLMRHTNYSF---SPWHGFTIHRAKFIQSQDYQCSALMGGR 168
Query: 263 GSVSGTFTINITGLPGPP----IGPLDVSEITKHTCTLH 297
+S + + + + P + P ++ I +
Sbjct: 169 KVMSISIRLKVQKVIPGPPALTLVPAELVRIRGEAAQIV 207
Score = 88.9 bits (220), Expect = 5e-19
Identities = 35/219 (15%), Positives = 69/219 (31%), Gaps = 20/219 (9%)
Query: 1694 GGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVF 1753
G P + +LVV G +TL+C G+ W + + + G
Sbjct: 1 AGSIPVIEPSVPELVVKPGATVTLRCVGNGSV----EWDGPPSP-----HWTLYSDGSSS 51
Query: 1754 RLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRI-DRMPNALYIPEGDNTKVK- 1811
L N T + G Y C + + + P R + + + + E + +
Sbjct: 52 ILSTNNATFQNTGTYRCTEPGDPLGGSAAIHLYVKDPARPWNVLAQEVVVFEDQDALLPC 111
Query: 1812 IFYAGDQPMEVSLTK-NGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYT-VNLSNSS 1869
+ VSL + GR + + F + I + + DY L
Sbjct: 112 LLTDPVLEAGVSLVRVRGRPLMRHTNYSF---SPWHGFTIHRAKFIQSQDYQCSALMGGR 168
Query: 1870 GSVSGTFTINITGLPGPP----IGPLDVSEITKHTCTLH 1904
+S + + + + P + P ++ I +
Sbjct: 169 KVMSISIRLKVQKVIPGPPALTLVPAELVRIRGEAAQIV 207
Score = 81.9 bits (202), Expect = 1e-16
Identities = 26/200 (13%), Positives = 61/200 (30%), Gaps = 20/200 (10%)
Query: 481 PEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLII 540
P I + +C G ++ W PS ++++G + L
Sbjct: 5 PVIEPSVPELVVKPGATVTLRCVGNG----SVEWDG-----PPSPHWTLYSDGSSSILST 55
Query: 541 NSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPK-FNVPPRFRDTAYFDKGENVVVKIP 599
N+ + Y C S L + + +NV + + ++ ++
Sbjct: 56 NNATFQNTGTYRCTEPGDPLGGSAAIHLYVKDPARPWNVLAQ---EVVVFEDQDALLPCL 112
Query: 600 FTGY-PKPKITWYR-DNEVIESGGHFHVETSERHAILTIRDASNVDTAPYRVVAEND-LG 656
T + ++ R + ++ TI A + + Y+ A
Sbjct: 113 LTDPVLEAGVSLVRVRGRPLMRHTNYSFSPW---HGFTIHRAKFIQSQDYQCSALMGGRK 169
Query: 657 MDSAIVKIQISDRPD-PPQF 675
+ S +++++ PP
Sbjct: 170 VMSISIRLKVQKVIPGPPAL 189
Score = 75.0 bits (184), Expect = 2e-14
Identities = 19/99 (19%), Positives = 35/99 (35%), Gaps = 3/99 (3%)
Query: 91 PDFIVPLKDLVVPLGKLLTLQCEATGTPVPKC-RWLRNGREISSGARYRVET--AGGVFR 147
P + +LV G+ + C A+ V N +++ + V
Sbjct: 187 PALTLVPAELVRIRGEAAQIVCSASSVDVNFDVFLQHNNTKLAIPQQSDFHNNRYQKVLT 246
Query: 148 LHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRI 186
L+ ++V G+Y+C A N G TS ++
Sbjct: 247 LNLDQVDFQHAGNYSCVASNVQGKHSTSMFFRVVESAGN 285
Score = 75.0 bits (184), Expect = 2e-14
Identities = 19/99 (19%), Positives = 35/99 (35%), Gaps = 3/99 (3%)
Query: 1698 PDFIVPLKDLVVPLGKLLTLQCEATGTPVPKC-RWLRNGREISSGARYRVET--AGGVFR 1754
P + +LV G+ + C A+ V N +++ + V
Sbjct: 187 PALTLVPAELVRIRGEAAQIVCSASSVDVNFDVFLQHNNTKLAIPQQSDFHNNRYQKVLT 246
Query: 1755 LHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRI 1793
L+ ++V G+Y+C A N G TS ++
Sbjct: 247 LNLDQVDFQHAGNYSCVASNVQGKHSTSMFFRVVESAGN 285
Score = 72.3 bits (177), Expect = 2e-13
Identities = 23/134 (17%), Positives = 40/134 (29%), Gaps = 14/134 (10%)
Query: 454 AQNEAGLSLPSSASNSVQIK-DPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTI 512
A S S+++K + P + + I+ AQ C+ +
Sbjct: 163 ALMGGR----KVMSISIRLKVQKVIPGPPALTLVPAELVRIRGEAAQIVCSASSVDVNFD 218
Query: 513 SWLKGS---REITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELI 569
+L+ + I + H TL ++ V A Y C A N G ST
Sbjct: 219 VFLQHNNTKLAIPQQSDFHNNRYQKVLTLNLDQVDFQHAGNYSCVASNVQGKHSTSMFFR 278
Query: 570 IMTAPKFNVPPRFR 583
++
Sbjct: 279 VV------ESAGNS 286
Score = 72.3 bits (177), Expect = 2e-13
Identities = 23/134 (17%), Positives = 40/134 (29%), Gaps = 14/134 (10%)
Query: 2061 AQNEAGLSLPSSASNSVQIK-DPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTI 2119
A S S+++K + P + + I+ AQ C+ +
Sbjct: 163 ALMGGR----KVMSISIRLKVQKVIPGPPALTLVPAELVRIRGEAAQIVCSASSVDVNFD 218
Query: 2120 SWLKGS---REITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELI 2176
+L+ + I + H TL ++ V A Y C A N G ST
Sbjct: 219 VFLQHNNTKLAIPQQSDFHNNRYQKVLTLNLDQVDFQHAGNYSCVASNVQGKHSTSMFFR 278
Query: 2177 IMTAPKFNVPPRFR 2190
++
Sbjct: 279 VV------ESAGNS 286
Score = 69.2 bits (169), Expect = 2e-12
Identities = 27/171 (15%), Positives = 54/171 (31%), Gaps = 19/171 (11%)
Query: 2042 SQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQ 2101
S ++ N +R + SA+ + +KDP A V + +
Sbjct: 51 SILSTNNATFQNTGTYRCTEPGDPL---GGSAAIHLYVKDP----ARPWNVLAQEVVVFE 103
Query: 2102 NHNAQFQCTITGC-PKPTISWLK-GSREITPSARHHIFAEGDTYTLIINSVYGVDADEYV 2159
+ +A C +T + +S ++ R + + I+ + + +Y
Sbjct: 104 DQDALLPCLLTDPVLEAGVSLVRVRGRPLMRHTNYSFSPWH---GFTIHRAKFIQSQDYQ 160
Query: 2160 CRAVNKGG-VKSTKAELIIMTAPKFNVPPRF----RDTAYFESDVVVVVCV 2205
C A+ G V S L + PP + + +VC
Sbjct: 161 CSALMGGRKVMSISIRLKVQKVI--PGPPALTLVPAELVRIRGEAAQIVCS 209
Score = 54.2 bits (130), Expect = 2e-07
Identities = 19/127 (14%), Positives = 38/127 (29%), Gaps = 6/127 (4%)
Query: 1108 VCAVNAAGQGPWSSSSDIIMCCAPPCAPKITSDLSIRDMTVLAGEEFTITVPFSGRPKPT 1167
C+ G+ S S + + P P +T + ++ + GE I S
Sbjct: 160 QCSALMGGRKVMSISIRLKVQKVIPGPPALTLVPA--ELVRIRGEAAQIVCSASSVDVNF 217
Query: 1168 PIWTVNGD---EVSPDGRIKFETSENQTIYRNKSAKRATDSGSYTIQLVNTVGSDSASCK 1224
++ + + + + +G+Y+ N G S S
Sbjct: 218 DVFLQHNNTKLAIPQQSDFHNNRYQKVLTLNLDQV-DFQHAGNYSCVASNVQGKHSTSMF 276
Query: 1225 VYVVDKP 1231
VV+
Sbjct: 277 FRVVESA 283
Score = 54.2 bits (130), Expect = 2e-07
Identities = 19/118 (16%), Positives = 37/118 (31%), Gaps = 12/118 (10%)
Query: 2088 PEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLII 2147
P I + +C G ++ W PS ++++G + L
Sbjct: 5 PVIEPSVPELVVKPGATVTLRCVGNG----SVEWDG-----PPSPHWTLYSDGSSSILST 55
Query: 2148 NSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPK-FNVPPRFRDTAYFESDVVVVVC 2204
N+ + Y C S L + + +NV ++ FE ++ C
Sbjct: 56 NNATFQNTGTYRCTEPGDPLGGSAAIHLYVKDPARPWNVLA--QEVVVFEDQDALLPC 111
Score = 49.6 bits (118), Expect = 5e-06
Identities = 24/190 (12%), Positives = 49/190 (25%), Gaps = 26/190 (13%)
Query: 1324 TAKFPFTVPDPPGQPQIVDWDTNNATLMWDRPRTDGGSKIQGYKMLLKTPTGELPTTIWS 1383
A P + DP + + R G + + +P TI
Sbjct: 106 DALLPCLLTDPVLEAGVS----------LVRV---RGRPLMRHTNYSFSPWHGF--TI-H 149
Query: 1384 KIRPTSSTVY-CKDTTMNSSNSEPGKQSGP--VIVEEQPNKPVMDLSGVRDITVKAGEDF 1440
+ + S Y C + S + V++ P ++ GE
Sbjct: 150 RAKFIQSQDYQCS-----ALMGGRKVMSISIRLKVQKVIPGPPALTLVPAELVRIRGEAA 204
Query: 1441 SIHVPFMAFPQPAAFWFANDS--IIDDSDTRVHKQLTMNSASLVVKNSQRSDGGQYRLQL 1498
I + + +++ + + H +L + G Y
Sbjct: 205 QIVCSASSVDVNFDVFLQHNNTKLAIPQQSDFHNNRYQKVLTLNLDQVDFQHAGNYSCVA 264
Query: 1499 KNPAGFDTAT 1508
N G + +
Sbjct: 265 SNVQGKHSTS 274
Score = 38.8 bits (90), Expect = 0.017
Identities = 16/99 (16%), Positives = 31/99 (31%), Gaps = 12/99 (12%)
Query: 1135 PKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQTIY 1194
P I + ++ V G T+ +G + W + + +
Sbjct: 5 PVIEPSVP--ELVVKPGATVTLRCVGNGSVE----WDGP----PSPHWTLYSDGSSSILS 54
Query: 1195 RNKSAKRATDSGSYTIQLVNTVGSDSASCKVYVVDKPSP 1233
N + ++G+Y SA+ +YV D P
Sbjct: 55 TNNA--TFQNTGTYRCTEPGDPLGGSAAIHLYVKDPARP 91
Score = 34.6 bits (79), Expect = 0.32
Identities = 5/84 (5%), Positives = 19/84 (22%), Gaps = 7/84 (8%)
Query: 1413 VIVEEQPNKPVMDLSGVRDITVKAGEDFSIH-VPFMAFPQPAAFWFANDSIIDDSDTRVH 1471
+ V++ +++ V +D + + + T
Sbjct: 83 LYVKD---PARPWNVLAQEVVVFEDQDALLPCLLTDPVLEAGVSLVRVRGRPLMRHTNYS 139
Query: 1472 KQLTMNSASLVVKNSQRSDGGQYR 1495
+ ++ Y+
Sbjct: 140 ---FSPWHGFTIHRAKFIQSQDYQ 160
Score = 32.2 bits (73), Expect = 1.7
Identities = 21/104 (20%), Positives = 32/104 (30%), Gaps = 25/104 (24%)
Query: 1409 QSGPVIVEEQPNKPVMDLSGVRDITVKAGEDFSIHVPFMAFPQPAAFWFANDSIIDDSDT 1468
S PVI P ++ VK G ++ N S+ D
Sbjct: 2 GSIPVIEPSVP-----------ELVVKPGATVTLRC------------VGNGSVEWDGPP 38
Query: 1469 RVHKQLTM--NSASLVVKNSQRSDGGQYRLQLKNPAGFDTATLH 1510
H L +S+ L N+ + G YR +A +H
Sbjct: 39 SPHWTLYSDGSSSILSTNNATFQNTGTYRCTEPGDPLGGSAAIH 82
>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein,
cell membrane, cytoplasm, cytoskeleton, disease
mutation, immunoglobulin domain; NMR {Homo sapiens}
Length = 100
Score = 101 bits (253), Expect = 2e-25
Identities = 23/95 (24%), Positives = 38/95 (40%), Gaps = 1/95 (1%)
Query: 477 AAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHI-FAEGDT 535
A P I N + + + ++G P P +SW R + H + +E
Sbjct: 2 AMGPPRFIQVPENMSIDEGRFCRMDFKVSGLPAPDVSWYLNGRTVQSDDLHKMIVSEKGL 61
Query: 536 YTLIINSVYGVDADEYVCRAVNKGGVKSTKAELII 570
++LI V DA Y C A N+ G + +L +
Sbjct: 62 HSLIFEVVRASDAGAYACVAKNRAGEATFTVQLDV 96
Score = 101 bits (253), Expect = 2e-25
Identities = 23/95 (24%), Positives = 38/95 (40%), Gaps = 1/95 (1%)
Query: 2084 AAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHI-FAEGDT 2142
A P I N + + + ++G P P +SW R + H + +E
Sbjct: 2 AMGPPRFIQVPENMSIDEGRFCRMDFKVSGLPAPDVSWYLNGRTVQSDDLHKMIVSEKGL 61
Query: 2143 YTLIINSVYGVDADEYVCRAVNKGGVKSTKAELII 2177
++LI V DA Y C A N+ G + +L +
Sbjct: 62 HSLIFEVVRASDAGAYACVAKNRAGEATFTVQLDV 96
Score = 95.9 bits (239), Expect = 2e-23
Identities = 24/91 (26%), Positives = 42/91 (46%), Gaps = 1/91 (1%)
Query: 91 PDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETA-GGVFRLH 149
P FI +++ + G+ + + +G P P W NGR + S +++ + G+ L
Sbjct: 6 PRFIQVPENMSIDEGRFCRMDFKVSGLPAPDVSWYLNGRTVQSDDLHKMIVSEKGLHSLI 65
Query: 150 FNEVTDVDNGDYTCEAYNSVGFAHTSSRVKI 180
F V D G Y C A N G A + ++ +
Sbjct: 66 FEVVRASDAGAYACVAKNRAGEATFTVQLDV 96
Score = 95.9 bits (239), Expect = 2e-23
Identities = 24/91 (26%), Positives = 42/91 (46%), Gaps = 1/91 (1%)
Query: 1698 PDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETA-GGVFRLH 1756
P FI +++ + G+ + + +G P P W NGR + S +++ + G+ L
Sbjct: 6 PRFIQVPENMSIDEGRFCRMDFKVSGLPAPDVSWYLNGRTVQSDDLHKMIVSEKGLHSLI 65
Query: 1757 FNEVTDVDNGDYTCEAYNSVGFAHTSSRVKI 1787
F V D G Y C A N G A + ++ +
Sbjct: 66 FEVVRASDAGAYACVAKNRAGEATFTVQLDV 96
Score = 68.1 bits (167), Expect = 8e-14
Identities = 24/101 (23%), Positives = 38/101 (37%), Gaps = 2/101 (1%)
Query: 1130 APPCAPKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSE 1189
P+ +M++ G + SG P P W +NG V D K SE
Sbjct: 1 GAMGPPRFIQVP--ENMSIDEGRFCRMDFKVSGLPAPDVSWYLNGRTVQSDDLHKMIVSE 58
Query: 1190 NQTIYRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYVVDK 1230
RA+D+G+Y N G + + ++ V+ K
Sbjct: 59 KGLHSLIFEVVRASDAGAYACVAKNRAGEATFTVQLDVLAK 99
Score = 67.3 bits (165), Expect = 2e-13
Identities = 21/100 (21%), Positives = 38/100 (38%), Gaps = 4/100 (4%)
Query: 571 MTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSER 630
M P+F P +G + +G P P ++WY + ++S + SE+
Sbjct: 3 MGPPRFIQVPENMSID---EGRFCRMDFKVSGLPAPDVSWYLNGRTVQSDDLHKMIVSEK 59
Query: 631 -HAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQISDR 669
L D Y VA+N G + V++ + +
Sbjct: 60 GLHSLIFEVVRASDAGAYACVAKNRAGEATFTVQLDVLAK 99
Score = 56.9 bits (138), Expect = 8e-10
Identities = 29/95 (30%), Positives = 45/95 (47%), Gaps = 3/95 (3%)
Query: 183 PPRIDRMPNALYIPEGDNTKVKIFYAGDQPM-EVSLTKNGRVVQSDDRFKFTVLDD-YII 240
PPR ++P + I EG ++ +G P +VS NGR VQSDD K V +
Sbjct: 5 PPRFIQVPENMSIDEGRFCRMDFKVSGL-PAPDVSWYLNGRTVQSDDLHKMIVSEKGLHS 63
Query: 241 IFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITG 275
+ + +R DAG Y N +G + T +++
Sbjct: 64 LIFEVVRASDAGAYACVAKNRAGEATFTVQLDVLA 98
Score = 56.9 bits (138), Expect = 8e-10
Identities = 29/95 (30%), Positives = 45/95 (47%), Gaps = 3/95 (3%)
Query: 1790 PPRIDRMPNALYIPEGDNTKVKIFYAGDQPM-EVSLTKNGRVVQSDDRFKFTVLDD-YII 1847
PPR ++P + I EG ++ +G P +VS NGR VQSDD K V +
Sbjct: 5 PPRFIQVPENMSIDEGRFCRMDFKVSGL-PAPDVSWYLNGRTVQSDDLHKMIVSEKGLHS 63
Query: 1848 IFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITG 1882
+ + +R DAG Y N +G + T +++
Sbjct: 64 LIFEVVRASDAGAYACVAKNRAGEATFTVQLDVLA 98
Score = 43.5 bits (103), Expect = 4e-05
Identities = 18/79 (22%), Positives = 28/79 (35%)
Query: 1430 RDITVKAGEDFSIHVPFMAFPQPAAFWFANDSIIDDSDTRVHKQLTMNSASLVVKNSQRS 1489
++++ G + P P W+ N + D SL+ + + S
Sbjct: 13 ENMSIDEGRFCRMDFKVSGLPAPDVSWYLNGRTVQSDDLHKMIVSEKGLHSLIFEVVRAS 72
Query: 1490 DGGQYRLQLKNPAGFDTAT 1508
D G Y KN AG T T
Sbjct: 73 DAGAYACVAKNRAGEATFT 91
>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold,
structural genomics, NPPSFA; NMR {Homo sapiens}
Length = 110
Score = 101 bits (253), Expect = 3e-25
Identities = 24/100 (24%), Positives = 40/100 (40%), Gaps = 2/100 (2%)
Query: 477 AAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGD-- 534
++ AP + L++ + F C + G PKP I W K ++I+P + H+
Sbjct: 5 SSGAPFFEMKLKHYKIFEGMPVTFTCRVAGNPKPKIYWFKDGKQISPKSDHYTIQRDLDG 64
Query: 535 TYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAP 574
T +L + D Y A N G S L++
Sbjct: 65 TCSLHTTASTLDDDGNYTIMAANPQGRISCTGRLMVQAVN 104
Score = 101 bits (253), Expect = 3e-25
Identities = 24/100 (24%), Positives = 40/100 (40%), Gaps = 2/100 (2%)
Query: 2084 AAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGD-- 2141
++ AP + L++ + F C + G PKP I W K ++I+P + H+
Sbjct: 5 SSGAPFFEMKLKHYKIFEGMPVTFTCRVAGNPKPKIYWFKDGKQISPKSDHYTIQRDLDG 64
Query: 2142 TYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAP 2181
T +L + D Y A N G S L++
Sbjct: 65 TCSLHTTASTLDDDGNYTIMAANPQGRISCTGRLMVQAVN 104
Score = 98.2 bits (245), Expect = 3e-24
Identities = 27/100 (27%), Positives = 41/100 (41%), Gaps = 2/100 (2%)
Query: 88 GEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRV--ETAGGV 145
P F + LK + G +T C G P PK W ++G++IS + + G
Sbjct: 6 SGAPFFEMKLKHYKIFEGMPVTFTCRVAGNPKPKIYWFKDGKQISPKSDHYTIQRDLDGT 65
Query: 146 FRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPR 185
LH T D+G+YT A N G + R+ +
Sbjct: 66 CSLHTTASTLDDDGNYTIMAANPQGRISCTGRLMVQAVNS 105
Score = 98.2 bits (245), Expect = 3e-24
Identities = 27/100 (27%), Positives = 41/100 (41%), Gaps = 2/100 (2%)
Query: 1695 GEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRV--ETAGGV 1752
P F + LK + G +T C G P PK W ++G++IS + + G
Sbjct: 6 SGAPFFEMKLKHYKIFEGMPVTFTCRVAGNPKPKIYWFKDGKQISPKSDHYTIQRDLDGT 65
Query: 1753 FRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPR 1792
LH T D+G+YT A N G + R+ +
Sbjct: 66 CSLHTTASTLDDDGNYTIMAANPQGRISCTGRLMVQAVNS 105
Score = 72.8 bits (179), Expect = 3e-15
Identities = 23/103 (22%), Positives = 39/103 (37%), Gaps = 5/103 (4%)
Query: 573 APKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVI-ESGGHFHVETSERH 631
AP F + + +G V G PKPKI W++D + I H+ ++
Sbjct: 8 APFFEMKLKHYKIF---EGMPVTFTCRVAGNPKPKIYWFKDGKQISPKSDHYTIQRDLDG 64
Query: 632 -AILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQISDRPDPP 673
L ++ D Y ++A N G S ++ + P
Sbjct: 65 TCSLHTTASTLDDDGNYTIMAANPQGRISCTGRLMVQAVNSGP 107
Score = 70.1 bits (172), Expect = 3e-14
Identities = 27/108 (25%), Positives = 42/108 (38%), Gaps = 7/108 (6%)
Query: 1130 APPCAPKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGR---IKFE 1186
AP L + + G T T +G PKP W +G ++SP I+ +
Sbjct: 4 GSSGAPFFEMKL--KHYKIFEGMPVTFTCRVAGNPKPKIYWFKDGKQISPKSDHYTIQRD 61
Query: 1187 TSENQTIYRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYVVDKPSPP 1234
+++ S D G+YTI N G S + ++ V S P
Sbjct: 62 LDGTCSLHTTAS--TLDDDGNYTIMAANPQGRISCTGRLMVQAVNSGP 107
Score = 52.4 bits (126), Expect = 4e-08
Identities = 18/102 (17%), Positives = 34/102 (33%), Gaps = 2/102 (1%)
Query: 181 GTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDD--Y 238
P + I EG AG+ ++ K+G+ + D
Sbjct: 6 SGAPFFEMKLKHYKIFEGMPVTFTCRVAGNPKPKIYWFKDGKQISPKSDHYTIQRDLDGT 65
Query: 239 IIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPP 280
+ +D G+YT+ +N G +S T + + + P
Sbjct: 66 CSLHTTASTLDDDGNYTIMAANPQGRISCTGRLMVQAVNSGP 107
Score = 52.4 bits (126), Expect = 4e-08
Identities = 18/102 (17%), Positives = 34/102 (33%), Gaps = 2/102 (1%)
Query: 1788 GTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDD--Y 1845
P + I EG AG+ ++ K+G+ + D
Sbjct: 6 SGAPFFEMKLKHYKIFEGMPVTFTCRVAGNPKPKIYWFKDGKQISPKSDHYTIQRDLDGT 65
Query: 1846 IIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPP 1887
+ +D G+YT+ +N G +S T + + + P
Sbjct: 66 CSLHTTASTLDDDGNYTIMAANPQGRISCTGRLMVQAVNSGP 107
Score = 46.6 bits (111), Expect = 4e-06
Identities = 18/80 (22%), Positives = 29/80 (36%), Gaps = 1/80 (1%)
Query: 1430 RDITVKAGEDFSIHVPFMAFPQPAAFWFAND-SIIDDSDTRVHKQLTMNSASLVVKNSQR 1488
+ + G + P+P +WF + I SD ++ + SL S
Sbjct: 16 KHYKIFEGMPVTFTCRVAGNPKPKIYWFKDGKQISPKSDHYTIQRDLDGTCSLHTTASTL 75
Query: 1489 SDGGQYRLQLKNPAGFDTAT 1508
D G Y + NP G + T
Sbjct: 76 DDDGNYTIMAANPQGRISCT 95
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion
comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Length = 201
Score = 104 bits (261), Expect = 3e-25
Identities = 34/195 (17%), Positives = 53/195 (27%), Gaps = 13/195 (6%)
Query: 481 PEIIVPLRNANAIQNHNAQFQCTITGCPKP--TISWLKGSREITPSARHHIFAEGDTYTL 538
P + C + WL + + F L
Sbjct: 9 PFPPEERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNL 68
Query: 539 IINSVYGVDADEYVCRAVNK-GGVKSTKAELIIMTAPKFNV---PPRFRD---TAYFDKG 591
I +V D Y C + + ++ P+ P Y G
Sbjct: 69 YIANVEASDKGNYSCFVSSPSITKSVFSKFIPLIPIPERTTKPYPADIVVQFKDVYALMG 128
Query: 592 ENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAPYRVVA 651
+NV ++ G P P I W + E + S + L I + D Y A
Sbjct: 129 QNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTSGAV----LKIFNIQLEDEGIYECEA 184
Query: 652 ENDLGMDSAIVKIQI 666
EN G D +I +
Sbjct: 185 ENIRGKDKHQARIYV 199
Score = 94.2 bits (234), Expect = 1e-21
Identities = 39/200 (19%), Positives = 58/200 (29%), Gaps = 20/200 (10%)
Query: 90 KPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKC--RWLRNGREISSGARYRVETAGGVFR 147
P ++ V GK + L C+ RWL N + R +
Sbjct: 8 DPFPPEERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGN 67
Query: 148 LHFNEVTDVDNGDYTCEAYNSVGFAHTSS----------RVKIGTPPRIDRMPNALYIPE 197
L+ V D G+Y+C + S R P I +Y
Sbjct: 68 LYIANVEASDKGNYSCFVSSPSITKSVFSKFIPLIPIPERTTKPYPADIVVQFKDVYALM 127
Query: 198 GDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKF--TVLDDYIIIFIKEIRKEDAGDYT 255
G N ++ F G+ ++ K + S VL I I+ ED G Y
Sbjct: 128 GQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTSGAVL------KIFNIQLEDEGIYE 181
Query: 256 VNLSNSSGSVSGTFTINITG 275
N G I +
Sbjct: 182 CEAENIRGKDKHQARIYVQA 201
Score = 94.2 bits (234), Expect = 1e-21
Identities = 39/200 (19%), Positives = 58/200 (29%), Gaps = 20/200 (10%)
Query: 1697 KPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKC--RWLRNGREISSGARYRVETAGGVFR 1754
P ++ V GK + L C+ RWL N + R +
Sbjct: 8 DPFPPEERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGN 67
Query: 1755 LHFNEVTDVDNGDYTCEAYNSVGFAHTSS----------RVKIGTPPRIDRMPNALYIPE 1804
L+ V D G+Y+C + S R P I +Y
Sbjct: 68 LYIANVEASDKGNYSCFVSSPSITKSVFSKFIPLIPIPERTTKPYPADIVVQFKDVYALM 127
Query: 1805 GDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKF--TVLDDYIIIFIKEIRKEDAGDYT 1862
G N ++ F G+ ++ K + S VL I I+ ED G Y
Sbjct: 128 GQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTSGAVL------KIFNIQLEDEGIYE 181
Query: 1863 VNLSNSSGSVSGTFTINITG 1882
N G I +
Sbjct: 182 CEAENIRGKDKHQARIYVQA 201
Score = 90.3 bits (224), Expect = 3e-20
Identities = 29/120 (24%), Positives = 42/120 (35%), Gaps = 6/120 (5%)
Query: 63 IAVNAIG--KSEPSICTTPVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVP 120
+ D +V KD+ +G+ +TL+C A G PVP
Sbjct: 84 FVSSPSITKSVFSKFIPLIPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPVP 143
Query: 121 KCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKI 180
RW + + S A G V L + D G Y CEA N G +R+ +
Sbjct: 144 DIRWRKVLEPMPSTAEISTS--GAV--LKIFNIQLEDEGIYECEAENIRGKDKHQARIYV 199
Score = 90.3 bits (224), Expect = 3e-20
Identities = 29/120 (24%), Positives = 42/120 (35%), Gaps = 6/120 (5%)
Query: 1670 IAVNAIG--KSEPSICTTPVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVP 1727
+ D +V KD+ +G+ +TL+C A G PVP
Sbjct: 84 FVSSPSITKSVFSKFIPLIPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPVP 143
Query: 1728 KCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKI 1787
RW + + S A G V L + D G Y CEA N G +R+ +
Sbjct: 144 DIRWRKVLEPMPSTAEISTS--GAV--LKIFNIQLEDEGIYECEAENIRGKDKHQARIYV 199
Score = 80.3 bits (198), Expect = 8e-17
Identities = 22/119 (18%), Positives = 38/119 (31%), Gaps = 6/119 (5%)
Query: 454 AQNEAGLSLPSSASNSVQIKDP--MAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPT 511
+ + S + +I+V ++ A+ N +C G P P
Sbjct: 85 VSSPSITKSVFSKFIPLIPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPVPD 144
Query: 512 ISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELII 570
I W K + +A L I ++ D Y C A N G +A + +
Sbjct: 145 IRWRKVLEPMPSTAEIST----SGAVLKIFNIQLEDEGIYECEAENIRGKDKHQARIYV 199
Score = 80.3 bits (198), Expect = 8e-17
Identities = 22/119 (18%), Positives = 38/119 (31%), Gaps = 6/119 (5%)
Query: 2061 AQNEAGLSLPSSASNSVQIKDP--MAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPT 2118
+ + S + +I+V ++ A+ N +C G P P
Sbjct: 85 VSSPSITKSVFSKFIPLIPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPVPD 144
Query: 2119 ISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELII 2177
I W K + +A L I ++ D Y C A N G +A + +
Sbjct: 145 IRWRKVLEPMPSTAEIST----SGAVLKIFNIQLEDEGIYECEAENIRGKDKHQARIYV 199
Score = 59.9 bits (145), Expect = 8e-10
Identities = 16/119 (13%), Positives = 28/119 (23%), Gaps = 3/119 (2%)
Query: 2088 PEIIVPLRNANAIQNHNAQFQCTITGCPKP--TISWLKGSREITPSARHHIFAEGDTYTL 2145
P + C + WL + + F L
Sbjct: 9 PFPPEERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNL 68
Query: 2146 IINSVYGVDADEYVCRAVNK-GGVKSTKAELIIMTAPKFNVPPRFRDTAYFESDVVVVV 2203
I +V D Y C + + ++ P+ P D DV ++
Sbjct: 69 YIANVEASDKGNYSCFVSSPSITKSVFSKFIPLIPIPERTTKPYPADIVVQFKDVYALM 127
Score = 52.2 bits (125), Expect = 3e-07
Identities = 21/125 (16%), Positives = 37/125 (29%), Gaps = 12/125 (9%)
Query: 1108 VC-AVNAAGQGPWSSSSDIIMCCAP----PCAPKITSDLSIRDMTVLAGEEFTITVPFSG 1162
C + + S ++ P I D+ L G+ T+ G
Sbjct: 82 SCFVSSPSITKSVFSKFIPLIPIPERTTKPYPADIVVQFK--DVYALMGQNVTLECFALG 139
Query: 1163 RPKPTPIWTVNGDEVSPDGRIKFETSENQTIYRNKSAKRATDSGSYTIQLVNTVGSDSAS 1222
P P W + + I ++ + + D G Y + N G D
Sbjct: 140 NPVPDIRWRKVLEPMPSTAEI---STSGAVLKIFNI--QLEDEGIYECEAENIRGKDKHQ 194
Query: 1223 CKVYV 1227
++YV
Sbjct: 195 ARIYV 199
Score = 46.0 bits (109), Expect = 3e-05
Identities = 28/191 (14%), Positives = 55/191 (28%), Gaps = 27/191 (14%)
Query: 1324 TAKFPFTVPDPPGQPQIVDWDTNNATLMWDRPRTDGGSKIQGYKMLLKTPTGELPTTIWS 1383
P W N + D + G L I +
Sbjct: 25 GMVLLCDPPYHFPDDLSYRWLLNEFPV---FITMDKRRFVS-------QTNGNL--YI-A 71
Query: 1384 KIRPTSSTVY-CKDTTMNSSNSEPGKQSGPVIVEEQPNK-----PVMDLSGVRDITVKAG 1437
+ + Y C + S + S + + P + P + +D+ G
Sbjct: 72 NVEASDKGNYSCFVS---SPSITKSVFSKFIPLIPIPERTTKPYPADIVVQFKDVYALMG 128
Query: 1438 EDFSIHVPFMAFPQPAAFWFANDSIIDDSDTRVHKQLTMNSASLVVKNSQRSDGGQYRLQ 1497
++ ++ + P P W + + +++ + A L + N Q D G Y +
Sbjct: 129 QNVTLECFALGNPVPDIRWRKVLEPMPSTA-----EISTSGAVLKIFNIQLEDEGIYECE 183
Query: 1498 LKNPAGFDTAT 1508
+N G D
Sbjct: 184 AENIRGKDKHQ 194
Score = 41.8 bits (98), Expect = 0.001
Identities = 17/115 (14%), Positives = 38/115 (33%), Gaps = 9/115 (7%)
Query: 1431 DITVKAGEDFSIH-VPFMAFPQPAAFWFANDSIIDDSDTRVHKQLTMNSASLVVKNSQRS 1489
++ VK G+ + P FP ++ + + + ++ + +L + N + S
Sbjct: 17 EVRVKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEAS 76
Query: 1490 DGGQYRLQLKNPAGFDTATLHSRLRTLPDSVNPRCHLPSSTSKERPKFPTHPNHQ 1544
D G Y + +P+ T + +P P +T
Sbjct: 77 DKGNYSCFVSSPSI----TKSVFSKFIPLIPIP----ERTTKPYPADIVVQFKDV 123
Score = 32.9 bits (75), Expect = 0.76
Identities = 22/111 (19%), Positives = 40/111 (36%), Gaps = 14/111 (12%)
Query: 1145 DMTVLAGEEFTIT-VPFSGRPKPTPI-WTVNGDEV--SPDGRIKFETSENQTIYRNKSAK 1200
++ V G+ + P P W +N V + D R +F + N +Y
Sbjct: 17 EVRVKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKR-RFVSQTNGNLYIANV-- 73
Query: 1201 RATDSGSYTIQLVNTVGSDSASCKVYVV-------DKPSPPQGPLDVSDIT 1244
A+D G+Y+ + + + S K + KP P + D+
Sbjct: 74 EASDKGNYSCFVSSPSITKSVFSKFIPLIPIPERTTKPYPADIVVQFKDVY 124
>1f97_A Junction adhesion molecule; immunoglobulin superfamily,
beta-sandwich fold, cell adhesion; 2.50A {Mus musculus}
SCOP: b.1.1.1 b.1.1.4
Length = 212
Score = 104 bits (261), Expect = 4e-25
Identities = 37/212 (17%), Positives = 69/212 (32%), Gaps = 20/212 (9%)
Query: 90 KPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFR-- 147
K D+ VP + + L C +G P+ W ++ Y +
Sbjct: 1 KGSVYTAQSDVQVPENESIKLTCTYSGFSSPRVEWKFVQGSTTALVCYNSQITAPYADRV 60
Query: 148 ------LHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIG--TPPRIDRMPNALYIPEGD 199
+ F+ VT DNG+YTC G + + + PP + + G+
Sbjct: 61 TFSSSGITFSSVTRKDNGEYTCMVSEEGGQNYGEVSIHLTVLVPPSKPTISVPSSVTIGN 120
Query: 200 NTKVK-IFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIF--------IKEIRKED 250
+ + G P E S K+G + + D K + + D
Sbjct: 121 RAVLTCSEHDGSPPSEYSWFKDGISMLTADAKKTRAFMNSSFTIDPKSGDLIFDPVTAFD 180
Query: 251 AGDYTVNLSNSSGSVSGTFTINITGLPGPPIG 282
+G+Y N G+ + ++ + +G
Sbjct: 181 SGEYYCQAQNGYGTAMRSEAAHMDAVE-LNVG 211
Score = 104 bits (261), Expect = 4e-25
Identities = 37/212 (17%), Positives = 69/212 (32%), Gaps = 20/212 (9%)
Query: 1697 KPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFR-- 1754
K D+ VP + + L C +G P+ W ++ Y +
Sbjct: 1 KGSVYTAQSDVQVPENESIKLTCTYSGFSSPRVEWKFVQGSTTALVCYNSQITAPYADRV 60
Query: 1755 ------LHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIG--TPPRIDRMPNALYIPEGD 1806
+ F+ VT DNG+YTC G + + + PP + + G+
Sbjct: 61 TFSSSGITFSSVTRKDNGEYTCMVSEEGGQNYGEVSIHLTVLVPPSKPTISVPSSVTIGN 120
Query: 1807 NTKVK-IFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIF--------IKEIRKED 1857
+ + G P E S K+G + + D K + + D
Sbjct: 121 RAVLTCSEHDGSPPSEYSWFKDGISMLTADAKKTRAFMNSSFTIDPKSGDLIFDPVTAFD 180
Query: 1858 AGDYTVNLSNSSGSVSGTFTINITGLPGPPIG 1889
+G+Y N G+ + ++ + +G
Sbjct: 181 SGEYYCQAQNGYGTAMRSEAAHMDAVE-LNVG 211
Score = 104 bits (260), Expect = 4e-25
Identities = 29/209 (13%), Positives = 57/209 (27%), Gaps = 22/209 (10%)
Query: 481 PEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTY---- 536
+ + +N + + CT +G P + W T ++
Sbjct: 2 GSVYTAQSDVQVPENESIKLTCTYSGFSSPRVEWKFVQGSTTALVCYNSQITAPYADRVT 61
Query: 537 ----TLIINSVYGVDADEYVCRAVNKGGVKSTKA--ELIIMTAPKFNVPPRFRDTAYFDK 590
+ +SV D EY C +GG + L ++ P +
Sbjct: 62 FSSSGITFSSVTRKDNGEYTCMVSEEGGQNYGEVSIHLTVLVPPSKPTISV---PSSVTI 118
Query: 591 GENVVVK-IPFTGYPKPKITWYRDNEVIESGGHFHVETSERHAI--------LTIRDASN 641
G V+ G P + +W++D + + + L +
Sbjct: 119 GNRAVLTCSEHDGSPPSEYSWFKDGISMLTADAKKTRAFMNSSFTIDPKSGDLIFDPVTA 178
Query: 642 VDTAPYRVVAENDLGMDSAIVKIQISDRP 670
D+ Y A+N G +
Sbjct: 179 FDSGEYYCQAQNGYGTAMRSEAAHMDAVE 207
Score = 75.4 bits (185), Expect = 5e-15
Identities = 23/105 (21%), Positives = 36/105 (34%), Gaps = 9/105 (8%)
Query: 89 EKPDFIVPLKDLVVPLGKLLTLQC-EATGTPVPKCRWLRNGREISSGARYRVETAGGVFR 147
P V +G L C E G+P + W ++G + + +
Sbjct: 103 VPPSKPTISVPSSVTIGNRAVLTCSEHDGSPPSEYSWFKDGISMLTADAKKTRAFMNSSF 162
Query: 148 --------LHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPP 184
L F+ VT D+G+Y C+A N G A S +
Sbjct: 163 TIDPKSGDLIFDPVTAFDSGEYYCQAQNGYGTAMRSEAAHMDAVE 207
Score = 75.4 bits (185), Expect = 5e-15
Identities = 23/105 (21%), Positives = 36/105 (34%), Gaps = 9/105 (8%)
Query: 1696 EKPDFIVPLKDLVVPLGKLLTLQC-EATGTPVPKCRWLRNGREISSGARYRVETAGGVFR 1754
P V +G L C E G+P + W ++G + + +
Sbjct: 103 VPPSKPTISVPSSVTIGNRAVLTCSEHDGSPPSEYSWFKDGISMLTADAKKTRAFMNSSF 162
Query: 1755 --------LHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPP 1791
L F+ VT D+G+Y C+A N G A S +
Sbjct: 163 TIDPKSGDLIFDPVTAFDSGEYYCQAQNGYGTAMRSEAAHMDAVE 207
Score = 75.0 bits (184), Expect = 7e-15
Identities = 26/135 (19%), Positives = 40/135 (29%), Gaps = 16/135 (11%)
Query: 453 YAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCT-ITGCPKPT 511
E G S + + P P ++ + A C+ G P
Sbjct: 83 MVSEEGG-QNYGEVSIHLTVLVP-----PSKPTISVPSSVTIGNRAVLTCSEHDGSPPSE 136
Query: 512 ISWLKGSREITPSARHHI--------FAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKS 563
SW K + + + + LI + V D+ EY C+A N G
Sbjct: 137 YSWFKDGISMLTADAKKTRAFMNSSFTIDPKSGDLIFDPVTAFDSGEYYCQAQNGYGTAM 196
Query: 564 TKAELIIMTAPKFNV 578
M A + NV
Sbjct: 197 RSEAA-HMDAVELNV 210
Score = 75.0 bits (184), Expect = 7e-15
Identities = 26/135 (19%), Positives = 40/135 (29%), Gaps = 16/135 (11%)
Query: 2060 YAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCT-ITGCPKPT 2118
E G S + + P P ++ + A C+ G P
Sbjct: 83 MVSEEGG-QNYGEVSIHLTVLVP-----PSKPTISVPSSVTIGNRAVLTCSEHDGSPPSE 136
Query: 2119 ISWLKGSREITPSARHHI--------FAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKS 2170
SW K + + + + LI + V D+ EY C+A N G
Sbjct: 137 YSWFKDGISMLTADAKKTRAFMNSSFTIDPKSGDLIFDPVTAFDSGEYYCQAQNGYGTAM 196
Query: 2171 TKAELIIMTAPKFNV 2185
M A + NV
Sbjct: 197 RSEAA-HMDAVELNV 210
Score = 71.9 bits (176), Expect = 8e-14
Identities = 19/127 (14%), Positives = 38/127 (29%), Gaps = 12/127 (9%)
Query: 2088 PEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTY---- 2143
+ + +N + + CT +G P + W T ++
Sbjct: 2 GSVYTAQSDVQVPENESIKLTCTYSGFSSPRVEWKFVQGSTTALVCYNSQITAPYADRVT 61
Query: 2144 ----TLIINSVYGVDADEYVCRAVNKGGVKSTKA--ELIIMTAPKFNVPPRFRDTAYFES 2197
+ +SV D EY C +GG + L ++ P ++
Sbjct: 62 FSSSGITFSSVTRKDNGEYTCMVSEEGGQNYGEVSIHLTVLVPPSKPTIS--VPSSVTIG 119
Query: 2198 DVVVVVC 2204
+ V+ C
Sbjct: 120 NRAVLTC 126
Score = 48.4 bits (115), Expect = 7e-06
Identities = 19/106 (17%), Positives = 29/106 (27%), Gaps = 10/106 (9%)
Query: 1134 APKITSDLSIRDMTVLAGEEFTIT-VPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQT 1192
P + +V G +T G P W +G + K N +
Sbjct: 104 PPSKPT--ISVPSSVTIGNRAVLTCSEHDGSPPSEYSWFKDGISMLTADAKKTRAFMNSS 161
Query: 1193 IYRNK-------SAKRATDSGSYTIQLVNTVGSDSASCKVYVVDKP 1231
+ A DSG Y Q N G+ S ++
Sbjct: 162 FTIDPKSGDLIFDPVTAFDSGEYYCQAQNGYGTAMRSEAAHMDAVE 207
Score = 47.3 bits (112), Expect = 2e-05
Identities = 21/130 (16%), Positives = 39/130 (30%), Gaps = 12/130 (9%)
Query: 1400 NSSNSEPGKQSGPVIVEEQPNKPVMDLSGVRDITVKAGEDFSIH-VPFMAFPQPAAFWFA 1458
G+ S + V P+KP + +V G + P WF
Sbjct: 86 EEGGQNYGEVSIHLTVLVPPSKPTI----SVPSSVTIGNRAVLTCSEHDGSPPSEYSWFK 141
Query: 1459 NDSIIDDSD-------TRVHKQLTMNSASLVVKNSQRSDGGQYRLQLKNPAGFDTATLHS 1511
+ + +D + S L+ D G+Y Q +N G + +
Sbjct: 142 DGISMLTADAKKTRAFMNSSFTIDPKSGDLIFDPVTAFDSGEYYCQAQNGYGTAMRSEAA 201
Query: 1512 RLRTLPDSVN 1521
+ + +V
Sbjct: 202 HMDAVELNVG 211
Score = 42.6 bits (100), Expect = 5e-04
Identities = 19/116 (16%), Positives = 36/116 (31%), Gaps = 11/116 (9%)
Query: 1135 PKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQTIY 1194
+ + + D+ V E +T +SG P W + + +
Sbjct: 2 GSVYT--AQSDVQVPENESIKLTCTYSGFSSPRVEWKFVQGSTTALVCYNSQITAPYADR 59
Query: 1195 RNKSAK-------RATDSGSYTIQLVNTVGSDSASCKVY--VVDKPSPPQGPLDVS 1241
S+ D+G YT + G + ++ V+ PS P + S
Sbjct: 60 VTFSSSGITFSSVTRKDNGEYTCMVSEEGGQNYGEVSIHLTVLVPPSKPTISVPSS 115
Score = 39.6 bits (92), Expect = 0.005
Identities = 20/140 (14%), Positives = 34/140 (24%), Gaps = 34/140 (24%)
Query: 1412 PVIVEEQPNKPVMDLSGVRDITVKAGEDFSIHVPFMAFPQPAAFW-------FANDSIID 1464
+ Q D+ V E + + F P W A
Sbjct: 2 GSVYTAQS-----------DVQVPENESIKLTCTYSGFSSPRVEWKFVQGSTTALVCYNS 50
Query: 1465 DSDTRVHKQLTMNSASLVVKNSQRSDGGQYRLQLKNPAGFDTATLHSRLRTLPDSVNPRC 1524
++T +S+ + + R D G+Y + G + + L L
Sbjct: 51 QITAPYADRVTFSSSGITFSSVTRKDNGEYTCMVSEEGGQNYGEVSIHLTVL-------- 102
Query: 1525 HLPSSTSKERPKFPTHPNHQ 1544
P PT
Sbjct: 103 --------VPPSKPTISVPS 114
>1wfu_A Unnamed protein product; FN3 domain, similar to 1700007B22RIK
protein, structural genomics, riken structural
genomics/proteomics initiative, RSGI; NMR {Mus musculus}
SCOP: b.1.2.1
Length = 120
Score = 100 bits (251), Expect = 5e-25
Identities = 22/110 (20%), Positives = 42/110 (38%), Gaps = 5/110 (4%)
Query: 659 SAIVKIQISDRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNIT----NYIVEKREHPMS 714
S + ++ P P V + H S+ L W + + +E+ + M
Sbjct: 6 SGMEPHKVVP-LSKPHPPVVGKVTHHSIELYWDLEQKEKRQGPQEQWLRFSIEEEDPKMH 64
Query: 715 SWIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKD 764
S+ + T + GL P Y+FR+ + G + S + TT++
Sbjct: 65 SYGVIYTGYATRHVVEGLEPRTLYKFRLKVTSPSGEYEYSPVVSVATTRE 114
Score = 86.5 bits (214), Expect = 6e-20
Identities = 25/126 (19%), Positives = 45/126 (35%), Gaps = 14/126 (11%)
Query: 1214 NTVGSDSASCKVYVVDKPSPPQGPLDVSDITPESCSLSWKPPLDDGGSPIT----NYVVE 1269
++ S KV + KP PP V +T S L W + + +E
Sbjct: 2 SSGSSGMEPHKVVPLSKPHPPV----VGKVTHHSIELYWDLEQKEKRQGPQEQWLRFSIE 57
Query: 1270 KYESATGFWSKLSSFVRSPAYDVFGLETNRQYRFRVRAENQYGVSEPLELDNSITAKFPF 1329
+ + + + + + + V GLE Y+FR++ + G E + + T
Sbjct: 58 EEDPKMHSYGVIYT-GYATRHVVEGLEPRTLYKFRLKVTSPSGEYEYSPVVSVAT----- 111
Query: 1330 TVPDPP 1335
T P
Sbjct: 112 TRESGP 117
Score = 86.5 bits (214), Expect = 6e-20
Identities = 24/126 (19%), Positives = 46/126 (36%), Gaps = 14/126 (11%)
Query: 260 NSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTH----YVVE 315
+S S + P PP+ V ++T H+ L+W+ + + + +E
Sbjct: 2 SSGSSGMEPHKVVPLSKPHPPV----VGKVTHHSIELYWDLEQKEKRQGPQEQWLRFSIE 57
Query: 316 RRDISMPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPY 375
D M + I T + T +V+GL Y F + + +G ++
Sbjct: 58 EEDPKMHSYGVIYTG-YATRHVVEGLEPRTLYKFRLKVTSPSGEYEYSPVVSVAT----- 111
Query: 376 DKPSPP 381
+ S P
Sbjct: 112 TRESGP 117
Score = 86.5 bits (214), Expect = 6e-20
Identities = 24/126 (19%), Positives = 46/126 (36%), Gaps = 14/126 (11%)
Query: 1867 NSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTH----YVVE 1922
+S S + P PP+ V ++T H+ L+W+ + + + +E
Sbjct: 2 SSGSSGMEPHKVVPLSKPHPPV----VGKVTHHSIELYWDLEQKEKRQGPQEQWLRFSIE 57
Query: 1923 RRDISMPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPY 1982
D M + I T + T +V+GL Y F + + +G ++
Sbjct: 58 EEDPKMHSYGVIYTG-YATRHVVEGLEPRTLYKFRLKVTSPSGEYEYSPVVSVAT----- 111
Query: 1983 DKPSPP 1988
+ S P
Sbjct: 112 TRESGP 117
Score = 76.5 bits (188), Expect = 2e-16
Identities = 19/93 (20%), Positives = 34/93 (36%), Gaps = 8/93 (8%)
Query: 898 VLDRPHPPENLHADEFAGDSLTLYWTPPRDNGGSEIT----NYVVEKKDYNSTVWTKVSS 953
L +PHPP S+ LYW + + +E++D + + +
Sbjct: 15 PLSKPHPPVVGKVTH---HSIELYWDLEQKEKRQGPQEQWLRFSIEEEDPKMHSYGVIYT 71
Query: 954 YVTTPFVRVRNLAIGSTYEFRVMAENQYGLSKP 986
T V V L + Y+FR+ + G +
Sbjct: 72 GYATRHV-VEGLEPRTLYKFRLKVTSPSGEYEY 103
Score = 73.5 bits (180), Expect = 2e-15
Identities = 17/102 (16%), Positives = 37/102 (36%), Gaps = 6/102 (5%)
Query: 378 PSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWI----DKHEVGSDAWQRVNVAICA 433
S P PVV +V + L WD + Q W+ ++ + ++ +
Sbjct: 16 LSKPHPPVVGKVTHHSIELYWDLEQKEKRQGPQEQWLRFSIEEEDPKMHSYG--VIYTGY 73
Query: 434 PSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDP 475
++ + L Y+FR+ + +G S + ++
Sbjct: 74 ATRHVVEGLEPRTLYKFRLKVTSPSGEYEYSPVVSVATTRES 115
Score = 73.5 bits (180), Expect = 2e-15
Identities = 17/102 (16%), Positives = 37/102 (36%), Gaps = 6/102 (5%)
Query: 1985 PSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWI----DKHEVGSDAWQRVNVAICA 2040
S P PVV +V + L WD + Q W+ ++ + ++ +
Sbjct: 16 LSKPHPPVVGKVTHHSIELYWDLEQKEKRQGPQEQWLRFSIEEEDPKMHSYG--VIYTGY 73
Query: 2041 PSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDP 2082
++ + L Y+FR+ + +G S + ++
Sbjct: 74 ATRHVVEGLEPRTLYKFRLKVTSPSGEYEYSPVVSVATTRES 115
Score = 70.4 bits (172), Expect = 3e-14
Identities = 19/141 (13%), Positives = 33/141 (23%), Gaps = 32/141 (22%)
Query: 995 AKHPFDVPGAPGAPKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMA 1054
H P P T SI L W + + Q +
Sbjct: 9 EPHKVVPLSKPHPPVVGKVTHHSIELYWDLEQKEKRQGPQEQWLR--------------- 53
Query: 1055 HIPDTSLKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAA 1114
+ + + K T + V L Y+FR+ + +
Sbjct: 54 --------FSIEEEDPKMHSYGVIYTGYATRHV-------VEGLEPRTLYKFRLKVTSPS 98
Query: 1115 GQGPWSSSSDIIMCCAPPCAP 1135
G+ +S + P
Sbjct: 99 GEYEYSPVVSVAT--TRESGP 117
Score = 54.6 bits (131), Expect = 1e-08
Identities = 16/120 (13%), Positives = 27/120 (22%), Gaps = 43/120 (35%)
Query: 1562 TEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEGKSI 1621
T SI L W + + Q + + +
Sbjct: 28 THHSIELYWDLEQKEKRQGPQEQWLR-----------------------FSIE------- 57
Query: 1622 GSERGSTAQFLEREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPS 1681
E + + Y V L Y+FR+ + G+ E S
Sbjct: 58 -----------EEDPKMHSYGVI--YTGYATRHVVEGLEPRTLYKFRLKVTSPSGEYEYS 104
Score = 51.1 bits (122), Expect = 2e-07
Identities = 11/83 (13%), Positives = 21/83 (25%), Gaps = 5/83 (6%)
Query: 1312 GVSEPLELDNSITAKFPFTVPDPPGQPQIVDWDTNNATLMWDRPRTDGGSKIQGYKMLLK 1371
G S S P P + ++ L WD + + Q +
Sbjct: 1 GSSGS-----SGMEPHKVVPLSKPHPPVVGKVTHHSIELYWDLEQKEKRQGPQEQWLRFS 55
Query: 1372 TPTGELPTTIWSKIRPTSSTVYC 1394
+ + I +T +
Sbjct: 56 IEEEDPKMHSYGVIYTGYATRHV 78
Score = 49.2 bits (117), Expect = 6e-07
Identities = 11/70 (15%), Positives = 20/70 (28%), Gaps = 8/70 (11%)
Query: 5 GNTTIRFYYCEIIVDDCYIIERREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIA 64
+ + + IE + + Y V L Y+FR+
Sbjct: 43 KRQGPQEQWLR------FSIEEEDPKMHSYGVI--YTGYATRHVVEGLEPRTLYKFRLKV 94
Query: 65 VNAIGKSEPS 74
+ G+ E S
Sbjct: 95 TSPSGEYEYS 104
>3kvq_A Vascular endothelial growth factor receptor 2; vegfr2,
angiogenesis, ATP-binding, developmental protein,
differentiation, glycoprotein; 2.70A {Homo sapiens}
Length = 108
Score = 100 bits (250), Expect = 8e-25
Identities = 21/101 (20%), Positives = 40/101 (39%), Gaps = 2/101 (1%)
Query: 89 EKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRL 148
P L++ +G+ + + C A+G P P+ W ++ + + ++ G L
Sbjct: 9 VAPTITGNLENQTTSIGESIEVSCTASGNPPPQIMWFKDNETLVEDSGIVLK--DGNRNL 66
Query: 149 HFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRM 189
V D G YTC+A + +G A + I +
Sbjct: 67 TIRRVRKEDEGLYTCQACSVLGCAKVEAFFIIEGAQEKTNL 107
Score = 100 bits (250), Expect = 8e-25
Identities = 21/101 (20%), Positives = 40/101 (39%), Gaps = 2/101 (1%)
Query: 1696 EKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRL 1755
P L++ +G+ + + C A+G P P+ W ++ + + ++ G L
Sbjct: 9 VAPTITGNLENQTTSIGESIEVSCTASGNPPPQIMWFKDNETLVEDSGIVLK--DGNRNL 66
Query: 1756 HFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRM 1796
V D G YTC+A + +G A + I +
Sbjct: 67 TIRRVRKEDEGLYTCQACSVLGCAKVEAFFIIEGAQEKTNL 107
Score = 98.9 bits (247), Expect = 2e-24
Identities = 25/97 (25%), Positives = 37/97 (38%), Gaps = 2/97 (2%)
Query: 480 APEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLI 539
AP I L N + + CT +G P P I W K + + + + + L
Sbjct: 10 APTITGNLENQTTSIGESIEVSCTASGNPPPQIMWFKDNETLVEDSGIVL--KDGNRNLT 67
Query: 540 INSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKF 576
I V D Y C+A + G +A II A +
Sbjct: 68 IRRVRKEDEGLYTCQACSVLGCAKVEAFFIIEGAQEK 104
Score = 98.9 bits (247), Expect = 2e-24
Identities = 25/97 (25%), Positives = 37/97 (38%), Gaps = 2/97 (2%)
Query: 2087 APEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLI 2146
AP I L N + + CT +G P P I W K + + + + + L
Sbjct: 10 APTITGNLENQTTSIGESIEVSCTASGNPPPQIMWFKDNETLVEDSGIVL--KDGNRNLT 67
Query: 2147 INSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKF 2183
I V D Y C+A + G +A II A +
Sbjct: 68 IRRVRKEDEGLYTCQACSVLGCAKVEAFFIIEGAQEK 104
Score = 72.4 bits (178), Expect = 3e-15
Identities = 26/112 (23%), Positives = 42/112 (37%), Gaps = 8/112 (7%)
Query: 568 LIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVET 627
++ AP + T+ GE++ V +G P P+I W++DNE + ++
Sbjct: 5 VLERVAPTITGNLENQTTS---IGESIEVSCTASGNPPPQIMWFKDNETLVEDSGIVLKD 61
Query: 628 SERHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQISDRPDPPQFPTVE 679
R LTIR D Y A + LG I + +E
Sbjct: 62 GNR--NLTIRRVRKEDEGLYTCQACSVLGCAKVEAFFIIE---GAQEKTNLE 108
Score = 69.7 bits (171), Expect = 4e-14
Identities = 25/102 (24%), Positives = 37/102 (36%), Gaps = 7/102 (6%)
Query: 1134 APKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQ-T 1192
AP IT +L + T GE ++ SG P P +W + + + D I + T
Sbjct: 10 APTITGNL--ENQTTSIGESIEVSCTASGNPPPQIMWFKDNETLVEDSGIVLKDGNRNLT 67
Query: 1193 IYRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYVVDKPSPP 1234
I R R D G YT Q + +G +
Sbjct: 68 IRR----VRKEDEGLYTCQACSVLGCAKVEAFFIIEGAQEKT 105
Score = 54.7 bits (132), Expect = 6e-09
Identities = 21/103 (20%), Positives = 34/103 (33%), Gaps = 2/103 (1%)
Query: 178 VKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDD 237
V P I G++ +V +G+ P ++ K+ + D D
Sbjct: 5 VLERVAPTITGNLENQTTSIGESIEVSCTASGNPPPQIMWFKDNETLVEDSGIVLK--DG 62
Query: 238 YIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPP 280
+ I+ +RKED G YT + G I G
Sbjct: 63 NRNLTIRRVRKEDEGLYTCQACSVLGCAKVEAFFIIEGAQEKT 105
Score = 54.7 bits (132), Expect = 6e-09
Identities = 21/103 (20%), Positives = 34/103 (33%), Gaps = 2/103 (1%)
Query: 1785 VKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDD 1844
V P I G++ +V +G+ P ++ K+ + D D
Sbjct: 5 VLERVAPTITGNLENQTTSIGESIEVSCTASGNPPPQIMWFKDNETLVEDSGIVLK--DG 62
Query: 1845 YIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPP 1887
+ I+ +RKED G YT + G I G
Sbjct: 63 NRNLTIRRVRKEDEGLYTCQACSVLGCAKVEAFFIIEGAQEKT 105
Score = 48.5 bits (116), Expect = 8e-07
Identities = 14/79 (17%), Positives = 27/79 (34%), Gaps = 3/79 (3%)
Query: 1430 RDITVKAGEDFSIHVPFMAFPQPAAFWFANDSIIDDSDTRVHKQLTMNSASLVVKNSQRS 1489
+ T GE + P P WF ++ + + L + +L ++ ++
Sbjct: 18 ENQTTSIGESIEVSCTASGNPPPQIMWFKDNETLVEDS---GIVLKDGNRNLTIRRVRKE 74
Query: 1490 DGGQYRLQLKNPAGFDTAT 1508
D G Y Q + G
Sbjct: 75 DEGLYTCQACSVLGCAKVE 93
>2dm3_A KIAA0992 protein, palladin; beta-sandwich, myopalladin,
actin-associated scaffold, structural genomics, NPPSFA;
NMR {Homo sapiens}
Length = 110
Score = 99.7 bits (249), Expect = 1e-24
Identities = 29/99 (29%), Positives = 43/99 (43%), Gaps = 1/99 (1%)
Query: 88 GEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVE-TAGGVF 146
G +P F+ DL V GKL + C+ +G P P W +G+ + + +++ GV
Sbjct: 7 GFRPHFLQAPGDLTVQEGKLCRMDCKVSGLPTPDLSWQLDGKPVRPDSAHKMLVRENGVH 66
Query: 147 RLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPR 185
L VT D G YTC A N G S + +
Sbjct: 67 SLIIEPVTSRDAGIYTCIATNRAGQNSFSLELVVAAKES 105
Score = 99.7 bits (249), Expect = 1e-24
Identities = 29/99 (29%), Positives = 43/99 (43%), Gaps = 1/99 (1%)
Query: 1695 GEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVE-TAGGVF 1753
G +P F+ DL V GKL + C+ +G P P W +G+ + + +++ GV
Sbjct: 7 GFRPHFLQAPGDLTVQEGKLCRMDCKVSGLPTPDLSWQLDGKPVRPDSAHKMLVRENGVH 66
Query: 1754 RLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPR 1792
L VT D G YTC A N G S + +
Sbjct: 67 SLIIEPVTSRDAGIYTCIATNRAGQNSFSLELVVAAKES 105
Score = 98.2 bits (245), Expect = 3e-24
Identities = 24/99 (24%), Positives = 41/99 (41%), Gaps = 1/99 (1%)
Query: 477 AAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHI-FAEGDT 535
+ P + + + + C ++G P P +SW + + P + H + E
Sbjct: 6 SGFRPHFLQAPGDLTVQEGKLCRMDCKVSGLPTPDLSWQLDGKPVRPDSAHKMLVRENGV 65
Query: 536 YTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAP 574
++LII V DA Y C A N+ G S EL++
Sbjct: 66 HSLIIEPVTSRDAGIYTCIATNRAGQNSFSLELVVAAKE 104
Score = 98.2 bits (245), Expect = 3e-24
Identities = 24/99 (24%), Positives = 41/99 (41%), Gaps = 1/99 (1%)
Query: 2084 AAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHI-FAEGDT 2142
+ P + + + + C ++G P P +SW + + P + H + E
Sbjct: 6 SGFRPHFLQAPGDLTVQEGKLCRMDCKVSGLPTPDLSWQLDGKPVRPDSAHKMLVRENGV 65
Query: 2143 YTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAP 2181
++LII V DA Y C A N+ G S EL++
Sbjct: 66 HSLIIEPVTSRDAGIYTCIATNRAGQNSFSLELVVAAKE 104
Score = 75.1 bits (185), Expect = 4e-16
Identities = 29/101 (28%), Positives = 39/101 (38%), Gaps = 2/101 (1%)
Query: 1134 APKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQTI 1193
P D+TV G+ + SG P P W ++G V PD K EN
Sbjct: 9 RPHFLQAPG--DLTVQEGKLCRMDCKVSGLPTPDLSWQLDGKPVRPDSAHKMLVRENGVH 66
Query: 1194 YRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYVVDKPSPP 1234
+ D+G YT N G +S S ++ V K S P
Sbjct: 67 SLIIEPVTSRDAGIYTCIATNRAGQNSFSLELVVAAKESGP 107
Score = 70.9 bits (174), Expect = 1e-14
Identities = 20/102 (19%), Positives = 39/102 (38%), Gaps = 4/102 (3%)
Query: 573 APKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSER-H 631
P F P D + G+ + +G P P ++W D + + + E
Sbjct: 9 RPHFLQAPG--DLTVQE-GKLCRMDCKVSGLPTPDLSWQLDGKPVRPDSAHKMLVRENGV 65
Query: 632 AILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQISDRPDPP 673
L I ++ D Y +A N G +S +++ ++ + P
Sbjct: 66 HSLIIEPVTSRDAGIYTCIATNRAGQNSFSLELVVAAKESGP 107
Score = 65.5 bits (160), Expect = 1e-12
Identities = 24/102 (23%), Positives = 45/102 (44%), Gaps = 3/102 (2%)
Query: 181 GTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPM-EVSLTKNGRVVQSDDRFKFTVLDDYI 239
G P + P L + EG ++ +G P ++S +G+ V+ D K V ++ +
Sbjct: 7 GFRPHFLQAPGDLTVQEGKLCRMDCKVSGL-PTPDLSWQLDGKPVRPDSAHKMLVRENGV 65
Query: 240 I-IFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPP 280
+ I+ + DAG YT +N +G S + + + P
Sbjct: 66 HSLIIEPVTSRDAGIYTCIATNRAGQNSFSLELVVAAKESGP 107
Score = 65.5 bits (160), Expect = 1e-12
Identities = 24/102 (23%), Positives = 45/102 (44%), Gaps = 3/102 (2%)
Query: 1788 GTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPM-EVSLTKNGRVVQSDDRFKFTVLDDYI 1846
G P + P L + EG ++ +G P ++S +G+ V+ D K V ++ +
Sbjct: 7 GFRPHFLQAPGDLTVQEGKLCRMDCKVSGL-PTPDLSWQLDGKPVRPDSAHKMLVRENGV 65
Query: 1847 I-IFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPP 1887
+ I+ + DAG YT +N +G S + + + P
Sbjct: 66 HSLIIEPVTSRDAGIYTCIATNRAGQNSFSLELVVAAKESGP 107
Score = 45.8 bits (109), Expect = 9e-06
Identities = 20/100 (20%), Positives = 33/100 (33%), Gaps = 7/100 (7%)
Query: 1430 RDITVKAGEDFSIHVPFMAFPQPAAFWFANDSIIDDSDTRVHKQLTMNSASLVVKNSQRS 1489
D+TV+ G+ + P P W + + SL+++
Sbjct: 17 GDLTVQEGKLCRMDCKVSGLPTPDLSWQLDGKPVRPDSAHKMLVRENGVHSLIIEPVTSR 76
Query: 1490 DGGQYRLQLKNPAGFDTATLHSRLRTLPDSVNPRCHLPSS 1529
D G Y N AG ++ + L V + PSS
Sbjct: 77 DAGIYTCIATNRAGQNSFS--LELV-----VAAKESGPSS 109
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase,
kinase, membrane, ATP-binding, prenylation,
serine/threonine-protein kinase, alternative splicing;
HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Length = 304
Score = 105 bits (264), Expect = 2e-24
Identities = 22/85 (25%), Positives = 44/85 (51%)
Query: 813 IKTSSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMN 872
++T+++ + +E +G+GAF V ++R TG +FA K I S + EI ++
Sbjct: 2 MQTTNIRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLK 61
Query: 873 QLHHPKLINLHDAFEDDDEMVLIFE 897
++ H ++ L D +E L+ +
Sbjct: 62 KIKHENIVTLEDIYESTTHYYLVMQ 86
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin
dependent protein kinase, Mg synaptic plasticity,
pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB:
3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Length = 351
Score = 106 bits (266), Expect = 2e-24
Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 5/89 (5%)
Query: 814 KTSSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVS-----HNLEKELIRKEI 868
D Y++ E IG G F VV RC R+TG FA K + V+ L E +++E
Sbjct: 18 DDVLFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREA 77
Query: 869 DIMNQLHHPKLINLHDAFEDDDEMVLIFE 897
I + L HP ++ L + + D + ++FE
Sbjct: 78 SICHMLKHPHIVELLETYSSDGMLYMVFE 106
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding,
nucleotide-binding, serine/threonine-protein kinase,
transferase; HET: TPO; 1.72A {Caenorhabditis elegans}
PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Length = 284
Score = 103 bits (260), Expect = 4e-24
Identities = 30/85 (35%), Positives = 49/85 (57%), Gaps = 2/85 (2%)
Query: 815 TSSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSH--NLEKELIRKEIDIMN 872
++ D+YD+ EE+G GAF VV RC + TG FAAK I + + + +E I
Sbjct: 1 STKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICR 60
Query: 873 QLHHPKLINLHDAFEDDDEMVLIFE 897
+L HP ++ LHD+ +++ L+F+
Sbjct: 61 KLQHPNIVRLHDSIQEESFHYLVFD 85
>2yr3_A Myosin light chain kinase, smooth muscle; IG domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens}
Length = 99
Score = 97.4 bits (243), Expect = 5e-24
Identities = 35/92 (38%), Positives = 44/92 (47%), Gaps = 3/92 (3%)
Query: 89 EKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRL 148
P F LKD V G+ LQC GTPVP+ WL NG+ I R GV L
Sbjct: 10 VAPSFSSVLKDCAVIEGQDFVLQCSVRGTPVPRITWLLNGQPIQYA---RSTCEAGVAEL 66
Query: 149 HFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKI 180
H + D+G YTC A N++G S+ V +
Sbjct: 67 HIQDALPEDHGTYTCLAENALGQVSCSAWVTV 98
Score = 97.4 bits (243), Expect = 5e-24
Identities = 35/92 (38%), Positives = 44/92 (47%), Gaps = 3/92 (3%)
Query: 1696 EKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRL 1755
P F LKD V G+ LQC GTPVP+ WL NG+ I R GV L
Sbjct: 10 VAPSFSSVLKDCAVIEGQDFVLQCSVRGTPVPRITWLLNGQPIQYA---RSTCEAGVAEL 66
Query: 1756 HFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKI 1787
H + D+G YTC A N++G S+ V +
Sbjct: 67 HIQDALPEDHGTYTCLAENALGQVSCSAWVTV 98
Score = 95.1 bits (237), Expect = 3e-23
Identities = 27/107 (25%), Positives = 42/107 (39%), Gaps = 10/107 (9%)
Query: 464 SSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITP 523
SS S+ +++ AP L++ I+ + QC++ G P P I+WL + I
Sbjct: 2 SSGSSGMEV-------APSFSSVLKDCAVIEGQDFVLQCSVRGTPVPRITWLLNGQPIQY 54
Query: 524 SARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELII 570
+ E L I D Y C A N G S A + +
Sbjct: 55 ARSTC---EAGVAELHIQDALPEDHGTYTCLAENALGQVSCSAWVTV 98
Score = 95.1 bits (237), Expect = 3e-23
Identities = 27/107 (25%), Positives = 42/107 (39%), Gaps = 10/107 (9%)
Query: 2071 SSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITP 2130
SS S+ +++ AP L++ I+ + QC++ G P P I+WL + I
Sbjct: 2 SSGSSGMEV-------APSFSSVLKDCAVIEGQDFVLQCSVRGTPVPRITWLLNGQPIQY 54
Query: 2131 SARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELII 2177
+ E L I D Y C A N G S A + +
Sbjct: 55 ARSTC---EAGVAELHIQDALPEDHGTYTCLAENALGQVSCSAWVTV 98
Score = 69.7 bits (171), Expect = 2e-14
Identities = 29/104 (27%), Positives = 45/104 (43%), Gaps = 8/104 (7%)
Query: 564 TKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHF 623
+ + AP F+ + D A + G++ V++ G P P+ITW + + I+
Sbjct: 2 SSGSSGMEVAPSFSSVLK--DCAVIE-GQDFVLQCSVRGTPVPRITWLLNGQPIQYARST 58
Query: 624 HVETSERHAILTIRDASNVDTAPYRVVAENDLGMD--SAIVKIQ 665
A L I+DA D Y +AEN LG SA V +
Sbjct: 59 CEAG---VAELHIQDALPEDHGTYTCLAENALGQVSCSAWVTVH 99
Score = 62.0 bits (151), Expect = 1e-11
Identities = 24/96 (25%), Positives = 38/96 (39%), Gaps = 6/96 (6%)
Query: 1132 PCAPKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQ 1191
AP +S L +D V+ G++F + G P P W +NG + +
Sbjct: 9 EVAPSFSSVL--KDCAVIEGQDFVLQCSVRGTPVPRITWLLNGQPIQYARS--TCEAGVA 64
Query: 1192 TIYRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYV 1227
++ + D G+YT N +G S S V V
Sbjct: 65 ELHIQDA--LPEDHGTYTCLAENALGQVSCSAWVTV 98
Score = 46.2 bits (110), Expect = 5e-06
Identities = 18/100 (18%), Positives = 36/100 (36%), Gaps = 3/100 (3%)
Query: 174 TSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFT 233
+S + P + + EG + ++ G ++ NG+ +Q
Sbjct: 2 SSGSSGMEVAPSFSSVLKDCAVIEGQDFVLQCSVRGTPVPRITWLLNGQPIQYARST--- 58
Query: 234 VLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINI 273
+ I++ ED G YT N+ G VS + + +
Sbjct: 59 CEAGVAELHIQDALPEDHGTYTCLAENALGQVSCSAWVTV 98
Score = 46.2 bits (110), Expect = 5e-06
Identities = 18/100 (18%), Positives = 36/100 (36%), Gaps = 3/100 (3%)
Query: 1781 TSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFT 1840
+S + P + + EG + ++ G ++ NG+ +Q
Sbjct: 2 SSGSSGMEVAPSFSSVLKDCAVIEGQDFVLQCSVRGTPVPRITWLLNGQPIQYARST--- 58
Query: 1841 VLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINI 1880
+ I++ ED G YT N+ G VS + + +
Sbjct: 59 CEAGVAELHIQDALPEDHGTYTCLAENALGQVSCSAWVTV 98
Score = 44.6 bits (106), Expect = 2e-05
Identities = 17/79 (21%), Positives = 29/79 (36%), Gaps = 4/79 (5%)
Query: 1430 RDITVKAGEDFSIHVPFMAFPQPAAFWFANDSIIDDSDTRVHKQLTMNSASLVVKNSQRS 1489
+D V G+DF + P P W N I + + A L ++++
Sbjct: 19 KDCAVIEGQDFVLQCSVRGTPVPRITWLLNGQPIQYARSTC----EAGVAELHIQDALPE 74
Query: 1490 DGGQYRLQLKNPAGFDTAT 1508
D G Y +N G + +
Sbjct: 75 DHGTYTCLAENALGQVSCS 93
>1n26_A IL-6 receptor alpha chain; transmembrane, glycoprotein,
immunoglobulin domain, cytokine; HET: NAG BMA MAN NDG;
2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB:
1p9m_C 2arw_A
Length = 325
Score = 104 bits (260), Expect = 5e-24
Identities = 41/310 (13%), Positives = 86/310 (27%), Gaps = 24/310 (7%)
Query: 183 PPRIDRMPNALYIPEGDNTKVK-IFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIII 241
P + L GD+ + + V S + ++
Sbjct: 6 CPAQEVARGVLTSLPGDSVTLTCPGVEPEDNATVHWVLRKPAAGSHPSRWAGMGRRLLL- 64
Query: 242 FIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPP 301
+ ++ D+G+Y+ +G +GT + + +P + W P
Sbjct: 65 --RSVQLHDSGNYSCY---RAGRPAGTVHLLV-DVPPEEPQLSCFRKSPLSNVVCEWGPR 118
Query: 302 KYDGGLKVTHYVVERRDISMPHWICISTTCHD-------TTFIVQGLTEGQEYLFHVMAV 354
L T V+ R C + + + Y+ +
Sbjct: 119 S-TPSL-TTKAVLLVRKFQNSPAEDFQEPCQYSQESQKFSCQLAVPEGDSSFYIVSMCVA 176
Query: 355 NENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGD--FVNLSWDKPLD-DGGSRIQG 411
+ G +P PP VT V + +++++W P +
Sbjct: 177 SSVGSKFSKTQTFQG---CGILQPDPPANITVTAVARNPRWLSVTWQDPHSWNSSFYRLR 233
Query: 412 YWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQ 471
+ + S + V I + G ++ ++ AQ E G S S
Sbjct: 234 FELRYRAERSKTFTTWMV-KDLQHHCVIHDAWSGLRHVVQLRAQEEFGQGEWSEWSPEAM 292
Query: 472 IKDPMAAKAP 481
+++P
Sbjct: 293 GTPWTESRSP 302
Score = 104 bits (260), Expect = 5e-24
Identities = 41/310 (13%), Positives = 86/310 (27%), Gaps = 24/310 (7%)
Query: 1790 PPRIDRMPNALYIPEGDNTKVK-IFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIII 1848
P + L GD+ + + V S + ++
Sbjct: 6 CPAQEVARGVLTSLPGDSVTLTCPGVEPEDNATVHWVLRKPAAGSHPSRWAGMGRRLLL- 64
Query: 1849 FIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPP 1908
+ ++ D+G+Y+ +G +GT + + +P + W P
Sbjct: 65 --RSVQLHDSGNYSCY---RAGRPAGTVHLLV-DVPPEEPQLSCFRKSPLSNVVCEWGPR 118
Query: 1909 KYDGGLKVTHYVVERRDISMPHWICISTTCHD-------TTFIVQGLTEGQEYLFHVMAV 1961
L T V+ R C + + + Y+ +
Sbjct: 119 S-TPSL-TTKAVLLVRKFQNSPAEDFQEPCQYSQESQKFSCQLAVPEGDSSFYIVSMCVA 176
Query: 1962 NENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGD--FVNLSWDKPLD-DGGSRIQG 2018
+ G +P PP VT V + +++++W P +
Sbjct: 177 SSVGSKFSKTQTFQG---CGILQPDPPANITVTAVARNPRWLSVTWQDPHSWNSSFYRLR 233
Query: 2019 YWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQ 2078
+ + S + V I + G ++ ++ AQ E G S S
Sbjct: 234 FELRYRAERSKTFTTWMV-KDLQHHCVIHDAWSGLRHVVQLRAQEEFGQGEWSEWSPEAM 292
Query: 2079 IKDPMAAKAP 2088
+++P
Sbjct: 293 GTPWTESRSP 302
Score = 90.7 bits (224), Expect = 2e-19
Identities = 42/298 (14%), Positives = 85/298 (28%), Gaps = 25/298 (8%)
Query: 480 APEIIVPLRNANAIQNHNAQFQC-TITGCPKPTISWLKGSREITPSARHHIFAEGDTYTL 538
P V ++ + C + T+ W+ G L
Sbjct: 6 CPAQEVARGVLTSLPGDSVTLTCPGVEPEDNATVHWVLRKPAAGSHPSRWA---GMGRRL 62
Query: 539 IINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVK- 597
++ SV D+ Y C G + L++ P+ FR + NVV +
Sbjct: 63 LLRSVQLHDSGNYSCYR---AGRPAGTVHLLVDVPPEEPQLSCFRKSPL----SNVVCEW 115
Query: 598 --IPFTGYPKPKITWYRDNEVIESGGHFH--VETSERHAILTIRDASNVDTAPY--RVVA 651
+ R + + + E D++ Y +
Sbjct: 116 GPRSTPSLTTKAVLLVRKFQNSPAEDFQEPCQYSQESQKFSCQLAVPEGDSSFYIVSMCV 175
Query: 652 ENDLGM---DSAIVKIQISDRPDPPQFPTVEDIGHDSLALV--WRAP-IWDGGSNITNYI 705
+ +G + + +PDPP TV + + L W+ P W+ +
Sbjct: 176 ASSVGSKFSKTQTFQGCGILQPDPPANITVTAVARNPRWLSVTWQDPHSWNSSFYRLRFE 235
Query: 706 VEKREHPMSSWIRVGNTRFTTMA-ITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITT 762
+ R ++ I G ++ ++ A+ +G+ + S S
Sbjct: 236 LRYRAERSKTFTTWMVKDLQHHCVIHDAWSGLRHVVQLRAQEEFGQGEWSEWSPEAMG 293
Score = 90.7 bits (224), Expect = 2e-19
Identities = 49/336 (14%), Positives = 85/336 (25%), Gaps = 46/336 (13%)
Query: 90 KPDFIVPLKDLVVPLGKLLTLQCEA-TGTPVPKCRWLRNGREISSGARYRVETAGGVFRL 148
P V L G +TL C W+ S R G RL
Sbjct: 6 CPAQEVARGVLTSLPGDSVTLTCPGVEPEDNATVHWVLRKPAAGSH-PSRWAGMGR--RL 62
Query: 149 HFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMPNALYIPEGD--------- 199
V D+G+Y+C + + + PP ++ P +
Sbjct: 63 LLRSVQLHDSGNYSCYRAGRP---AGTVHLLVDVPPEEPQLSCFRKSPLSNVVCEWGPRS 119
Query: 200 ----NTKVKIFY-------AGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRK 248
TK + A D ++ + YI+
Sbjct: 120 TPSLTTKAVLLVRKFQNSPAEDFQEPCQYSQESQKFSCQLAVPEGDSSFYIV-------- 171
Query: 249 EDAGDYTVNLSNSSGSVS---GTFTINITGLPGPPIGP-LDVSEITKHTCTLHWNPP-KY 303
++ +++S GS TF P PP + ++ W P +
Sbjct: 172 ------SMCVASSVGSKFSKTQTFQGCGILQPDPPANITVTAVARNPRWLSVTWQDPHSW 225
Query: 304 DGGLKVTHYVVERRDISMPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPL 363
+ + + R + ++ G ++ + A E G G
Sbjct: 226 NSSFYRLRFELRYRAERSKTFTTWMVKDLQHHCVIHDAWSGLRHVVQLRAQEEFGQGEWS 285
Query: 364 EGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWD 399
E + SPP V+ D
Sbjct: 286 EWSPEAMGTPWTESRSPPAENEVSTPMQALTTNKDD 321
Score = 90.7 bits (224), Expect = 2e-19
Identities = 49/336 (14%), Positives = 85/336 (25%), Gaps = 46/336 (13%)
Query: 1697 KPDFIVPLKDLVVPLGKLLTLQCEA-TGTPVPKCRWLRNGREISSGARYRVETAGGVFRL 1755
P V L G +TL C W+ S R G RL
Sbjct: 6 CPAQEVARGVLTSLPGDSVTLTCPGVEPEDNATVHWVLRKPAAGSH-PSRWAGMGR--RL 62
Query: 1756 HFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMPNALYIPEGD--------- 1806
V D+G+Y+C + + + PP ++ P +
Sbjct: 63 LLRSVQLHDSGNYSCYRAGRP---AGTVHLLVDVPPEEPQLSCFRKSPLSNVVCEWGPRS 119
Query: 1807 ----NTKVKIFY-------AGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRK 1855
TK + A D ++ + YI+
Sbjct: 120 TPSLTTKAVLLVRKFQNSPAEDFQEPCQYSQESQKFSCQLAVPEGDSSFYIV-------- 171
Query: 1856 EDAGDYTVNLSNSSGSVS---GTFTINITGLPGPPIGP-LDVSEITKHTCTLHWNPP-KY 1910
++ +++S GS TF P PP + ++ W P +
Sbjct: 172 ------SMCVASSVGSKFSKTQTFQGCGILQPDPPANITVTAVARNPRWLSVTWQDPHSW 225
Query: 1911 DGGLKVTHYVVERRDISMPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPL 1970
+ + + R + ++ G ++ + A E G G
Sbjct: 226 NSSFYRLRFELRYRAERSKTFTTWMVKDLQHHCVIHDAWSGLRHVVQLRAQEEFGQGEWS 285
Query: 1971 EGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWD 2006
E + SPP V+ D
Sbjct: 286 EWSPEAMGTPWTESRSPPAENEVSTPMQALTTNKDD 321
Score = 73.7 bits (180), Expect = 1e-13
Identities = 28/235 (11%), Positives = 52/235 (22%), Gaps = 44/235 (18%)
Query: 898 VLDRPHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTKVSSYVTT 957
V P P+ + ++ W P S T V+ + + ++
Sbjct: 91 VDVPPEEPQLSCFRKSPLSNVVCEWGPRST--PSLTTKAVLLVRKFQNSPAEDFQEPCQY 148
Query: 958 PFVRVRN-------LAIGSTYEFRVMAENQYGLSKPALTIDPIKAKHPFDVPGAPGAPKG 1010
+ S Y + + G D P
Sbjct: 149 SQESQKFSCQLAVPEGDSSFYIVSMCVASSVGSKFSKTQTFQGCGILQPDPPANITV-TA 207
Query: 1011 VDSTEDSISLVWSKPRH-DGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSE 1069
V +S+ W P + R+ + R + + + D V+
Sbjct: 208 VARNPRWLSVTWQDPHSWNSSFYRLRFELRYRAERSKTF---TTWMVKDLQHHCVI---- 260
Query: 1070 GKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPWSSSSD 1124
+ ++ A GQG WS S
Sbjct: 261 --------------------------HDAWSGLRHVVQLRAQEEFGQGEWSEWSP 289
Score = 72.2 bits (176), Expect = 3e-13
Identities = 37/254 (14%), Positives = 67/254 (26%), Gaps = 26/254 (10%)
Query: 1130 APPCAPKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPI-WTVNGDEVSPDGRIKFETS 1188
AP P +++ +T L G+ T+T P + W +
Sbjct: 2 APRRCPAQ--EVARGVLTSLPGDSVTLTCPGVEPEDNATVHWVLRKPAAGSHPSRWAGMG 59
Query: 1189 ENQTIYRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYVVDKPSPPQGPLDVSDITPESC 1248
+ + + DSG+Y+ G + + + V P PQ +
Sbjct: 60 RRLLL----RSVQLHDSGNYSCY---RAGRPAGTVHLLVDVPPEEPQL-SCFRKSPLSNV 111
Query: 1249 SLSWKPPLDDGGSPITNYVV----EKYESATGFWSKLSSFVRSPAYDVF---GLETNRQY 1301
W P S T V+ + A F S + + Y
Sbjct: 112 VCEWGPRST--PSLTTKAVLLVRKFQNSPAEDFQEPCQYSQESQKFSCQLAVPEGDSSFY 169
Query: 1302 RFRVRAENQYGVSEPLELDNSITAKFPFTVPDPPGQPQIVDWDTNNATLM--WDRPRT-D 1358
+ + G PDPP + N L W P + +
Sbjct: 170 IVSMCVASSVGSKFSKTQTFQGCGILQ---PDPPANITVTAVARNPRWLSVTWQDPHSWN 226
Query: 1359 GGSKIQGYKMLLKT 1372
+++ +
Sbjct: 227 SSFYRLRFELRYRA 240
Score = 64.9 bits (157), Expect = 7e-11
Identities = 22/159 (13%), Positives = 53/159 (33%), Gaps = 7/159 (4%)
Query: 1203 TDSGSYTIQL--VNTVG---SDSASCKVYVVDKPSPPQGP-LDVSDITPESCSLSWKPPL 1256
DS Y + + ++VG S + + + + +P PP + P S++W+ P
Sbjct: 164 GDSSFYIVSMCVASSVGSKFSKTQTFQGCGILQPDPPANITVTAVARNPRWLSVTWQDPH 223
Query: 1257 D-DGGSPITNYVVEKYESATGFWSKLSSFVRSPAYDVFGLETNRQYRFRVRAENQYGVSE 1315
+ + + + ++ + + ++ ++RA+ ++G E
Sbjct: 224 SWNSSFYRLRFELRYRAERSKTFTTWMVKDLQHHCVIHDAWSGLRHVVQLRAQEEFGQGE 283
Query: 1316 PLELDNSITAKFPFTVPDPPGQPQIVDWDTNNATLMWDR 1354
E PP + ++ T D
Sbjct: 284 WSEWSPEAMGTPWTESRSPPAENEVSTPMQALTTNKDDD 322
Score = 56.8 bits (136), Expect = 3e-08
Identities = 15/137 (10%), Positives = 39/137 (28%), Gaps = 3/137 (2%)
Query: 890 DEMVLIFEVLDRPHPPENLHADEFAGDS--LTLYWTPPRD-NGGSEITNYVVEKKDYNST 946
+ +P PP N+ A + L++ W P N + + + S
Sbjct: 185 KTQTFQGCGILQPDPPANITVTAVARNPRWLSVTWQDPHSWNSSFYRLRFELRYRAERSK 244
Query: 947 VWTKVSSYVTTPFVRVRNLAIGSTYEFRVMAENQYGLSKPALTIDPIKAKHPFDVPGAPG 1006
+T + + G + ++ A+ ++G + + + P
Sbjct: 245 TFTTWMVKDLQHHCVIHDAWSGLRHVVQLRAQEEFGQGEWSEWSPEAMGTPWTESRSPPA 304
Query: 1007 APKGVDSTEDSISLVWS 1023
+ + +
Sbjct: 305 ENEVSTPMQALTTNKDD 321
Score = 43.7 bits (102), Expect = 5e-04
Identities = 15/96 (15%), Positives = 27/96 (28%), Gaps = 7/96 (7%)
Query: 2087 APEIIVPLRNANAIQNHNAQFQC-TITGCPKPTISWLKGSREITPSARHHIFAEGDTYTL 2145
P V ++ + C + T+ W+ G L
Sbjct: 6 CPAQEVARGVLTSLPGDSVTLTCPGVEPEDNATVHWVLRKPAAGSHPSRWA---GMGRRL 62
Query: 2146 IINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAP 2181
++ SV D+ Y C G + L++ P
Sbjct: 63 LLRSVQLHDSGNYSCYR---AGRPAGTVHLLVDVPP 95
Score = 43.3 bits (101), Expect = 6e-04
Identities = 32/299 (10%), Positives = 65/299 (21%), Gaps = 62/299 (20%)
Query: 1430 RDITVKAGEDFSIHVPFM-AFPQPAAFWFANDSIIDDSDTRVHKQLTMNSASLVVKNSQR 1488
+T G+ ++ P + W +R L++++ Q
Sbjct: 14 GVLTSLPGDSVTLTCPGVEPEDNATVHWVLRKPAAGSHPSRWA----GMGRRLLLRSVQL 69
Query: 1489 SDGGQYRLQLKNPAGFDTATLHSRLRTLPDSVNPRC----HLPSSTSKERPKFPTHPN-- 1542
D G Y AG T+H + P+ C L + + P+
Sbjct: 70 HDSGNYSCYR---AGRPAGTVHLLVDVPPEEPQLSCFRKSPLSNVVCEWGPRSTPSLTTK 126
Query: 1543 -----HQPWLKWARASLTSKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWI 1597
+ A S + P YIV +
Sbjct: 127 AVLLVRKFQNSPAEDFQEPCQYSQESQKFSCQLAVPE----GDSSFYIV---------SM 173
Query: 1598 KASMAHIPDTSLKYVLWVSEGKSIGSERGSTAQFLE------------------------ 1633
+ + S T +
Sbjct: 174 CVASSVGSKFSKTQTFQGCGILQPDPPANITVTAVARNPRWLSVTWQDPHSWNSSFYRLR 233
Query: 1634 -----REVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPSICTTPV 1687
R + ++ + + + G + ++ A G+ E S +
Sbjct: 234 FELRYRAERSKTFTTWMVKDL-QHHCVIHDAWSGLRHVVQLRAQEEFGQGEWSEWSPEA 291
Score = 36.8 bits (84), Expect = 0.082
Identities = 6/59 (10%), Positives = 19/59 (32%), Gaps = 1/59 (1%)
Query: 22 YIIERREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPSICTTPV 80
+ + R + ++ + + + G + ++ A G+ E S +
Sbjct: 234 FELRYRAERSKTFTTWMVKDL-QHHCVIHDAWSGLRHVVQLRAQEEFGQGEWSEWSPEA 291
Score = 32.1 bits (72), Expect = 2.2
Identities = 8/73 (10%), Positives = 19/73 (26%), Gaps = 6/73 (8%)
Query: 22 YIIERREVGGAIWLKCNDYNV---LECSFSVLNLVEGNDYEFRIIAVNAIGKSEPSICTT 78
+ C C +V + + Y + +++G T
Sbjct: 131 VRKFQNSPAEDFQEPCQYSQESQKFSCQLAV-PEGDSSFYIVSMCVASSVGSKFSK--TQ 187
Query: 79 PVKICEFVGGEKP 91
+ C + + P
Sbjct: 188 TFQGCGILQPDPP 200
>3irg_A Titin; IG-like, titin, OBSL1, complex, alternative splicing,
ATP-binding, calcium, calmodulin-binding,
cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_A 3q5o_A
2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Length = 100
Score = 97.4 bits (243), Expect = 6e-24
Identities = 27/95 (28%), Positives = 39/95 (41%), Gaps = 2/95 (2%)
Query: 88 GEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREI--SSGARYRVETAGGV 145
G P D+ + GK+LT+ C TG P P+ W GR+I R+ +E +
Sbjct: 3 GIPPKIEALPSDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIENTDDL 62
Query: 146 FRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKI 180
L +V D G YT N G + + I
Sbjct: 63 TTLIIMDVQKQDGGLYTLSLGNEFGSDSATVNIHI 97
Score = 97.4 bits (243), Expect = 6e-24
Identities = 27/95 (28%), Positives = 39/95 (41%), Gaps = 2/95 (2%)
Query: 1695 GEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREI--SSGARYRVETAGGV 1752
G P D+ + GK+LT+ C TG P P+ W GR+I R+ +E +
Sbjct: 3 GIPPKIEALPSDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIENTDDL 62
Query: 1753 FRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKI 1787
L +V D G YT N G + + I
Sbjct: 63 TTLIIMDVQKQDGGLYTLSLGNEFGSDSATVNIHI 97
Score = 95.5 bits (238), Expect = 2e-23
Identities = 26/95 (27%), Positives = 35/95 (36%), Gaps = 2/95 (2%)
Query: 478 AKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPS--ARHHIFAEGDT 535
P+I + + + C TG P P ++W G R+I R HI D
Sbjct: 3 GIPPKIEALPSDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIENTDDL 62
Query: 536 YTLIINSVYGVDADEYVCRAVNKGGVKSTKAELII 570
TLII V D Y N+ G S + I
Sbjct: 63 TTLIIMDVQKQDGGLYTLSLGNEFGSDSATVNIHI 97
Score = 95.5 bits (238), Expect = 2e-23
Identities = 26/95 (27%), Positives = 35/95 (36%), Gaps = 2/95 (2%)
Query: 2085 AKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPS--ARHHIFAEGDT 2142
P+I + + + C TG P P ++W G R+I R HI D
Sbjct: 3 GIPPKIEALPSDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIENTDDL 62
Query: 2143 YTLIINSVYGVDADEYVCRAVNKGGVKSTKAELII 2177
TLII V D Y N+ G S + I
Sbjct: 63 TTLIIMDVQKQDGGLYTLSLGNEFGSDSATVNIHI 97
Score = 81.2 bits (201), Expect = 2e-18
Identities = 32/97 (32%), Positives = 42/97 (43%), Gaps = 5/97 (5%)
Query: 572 TAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIES--GGHFHVETSE 629
PK P D+G+ + V FTG P P++TW I S G FH+E ++
Sbjct: 4 IPPKIEALPS---DISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIENTD 60
Query: 630 RHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQI 666
L I D D Y + N+ G DSA V I I
Sbjct: 61 DLTTLIIMDVQKQDGGLYTLSLGNEFGSDSATVNIHI 97
Score = 80.0 bits (198), Expect = 7e-18
Identities = 28/102 (27%), Positives = 48/102 (47%), Gaps = 5/102 (4%)
Query: 1130 APPCAPKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEV--SPDGRIKFET 1187
P PKI + D+++ G+ T+ F+G P P W+ G ++ GR E
Sbjct: 1 GPGIPPKIEALP--SDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIEN 58
Query: 1188 SENQTIYRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYVVD 1229
+++ T ++ D G YT+ L N GSDSA+ +++
Sbjct: 59 TDDLTTLIIMDVQKQ-DGGLYTLSLGNEFGSDSATVNIHIRS 99
Score = 72.7 bits (179), Expect = 3e-15
Identities = 32/98 (32%), Positives = 55/98 (56%), Gaps = 2/98 (2%)
Query: 181 GTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVL--DDY 238
G PP+I+ +P+ + I EG V + G+ EV+ + GR + S ++ +F + DD
Sbjct: 3 GIPPKIEALPSDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIENTDDL 62
Query: 239 IIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGL 276
+ I +++K+D G YT++L N GS S T I+I +
Sbjct: 63 TTLIIMDVQKQDGGLYTLSLGNEFGSDSATVNIHIRSI 100
Score = 72.7 bits (179), Expect = 3e-15
Identities = 32/98 (32%), Positives = 55/98 (56%), Gaps = 2/98 (2%)
Query: 1788 GTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVL--DDY 1845
G PP+I+ +P+ + I EG V + G+ EV+ + GR + S ++ +F + DD
Sbjct: 3 GIPPKIEALPSDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIENTDDL 62
Query: 1846 IIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGL 1883
+ I +++K+D G YT++L N GS S T I+I +
Sbjct: 63 TTLIIMDVQKQDGGLYTLSLGNEFGSDSATVNIHIRSI 100
Score = 61.2 bits (149), Expect = 3e-11
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Query: 1430 RDITVKAGEDFSIHVPFMAFPQPAAFWFANDSIIDDSDT-RVHKQLTMNSASLVVKNSQR 1488
DI++ G+ ++ F P P W I + R H + T + +L++ + Q+
Sbjct: 13 SDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIENTDDLTTLIIMDVQK 72
Query: 1489 SDGGQYRLQLKNPAGFDTAT 1508
DGG Y L L N G D+AT
Sbjct: 73 QDGGLYTLSLGNEFGSDSAT 92
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated,
transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A*
2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Length = 362
Score = 104 bits (262), Expect = 9e-24
Identities = 30/86 (34%), Positives = 49/86 (56%), Gaps = 2/86 (2%)
Query: 814 KTSSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSH--NLEKELIRKEIDIM 871
++ D+YD+ EE+G GAF VV RC + TG FAAK I + + + +E I
Sbjct: 23 ASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARIC 82
Query: 872 NQLHHPKLINLHDAFEDDDEMVLIFE 897
+L HP ++ LHD+ +++ L+F+
Sbjct: 83 RKLQHPNIVRLHDSIQEESFHYLVFD 108
>1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor
complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1
b.1.2.1 b.1.2.1 PDB: 1p9m_A
Length = 303
Score = 102 bits (256), Expect = 1e-23
Identities = 38/277 (13%), Positives = 69/277 (24%), Gaps = 19/277 (6%)
Query: 207 YAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDY-TVNLSNSSGSV 265
Y + N + + + + +I + +
Sbjct: 35 YFHVNANYIVWKTNHFTIPKEQYTI--INRTASSVTFTDIASLNIQLTCNILTFGQLEQN 92
Query: 266 SGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWI 325
TI P P L W+ + + L+ T++ ++ +
Sbjct: 93 VYGITIISGLPPEKPKN-LSCIVNEGKKMRCEWDGGR-ETHLE-TNFTLKSEWATHKFAD 149
Query: 326 CI-STTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYD--KPSPPG 382
C + + V A N G P KP+PP
Sbjct: 150 CKAKRDTPTSCTVDYSTVYFVNIEVWVEAENALGKVTS-----DHINFDPVYKVKPNPPH 204
Query: 383 IPVVTQVGG--DFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQ--IN 438
V + L+W P I Y I + W ++ A ++
Sbjct: 205 NLSVINSEELSSILKLTWTNP-SIKSVIILKYNIQYRTKDASTWSQIPPEDTASTRSSFT 263
Query: 439 IPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDP 475
+ +L +Y FR+ E G S S
Sbjct: 264 VQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITY 300
Score = 102 bits (256), Expect = 1e-23
Identities = 38/277 (13%), Positives = 69/277 (24%), Gaps = 19/277 (6%)
Query: 1814 YAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDY-TVNLSNSSGSV 1872
Y + N + + + + +I + +
Sbjct: 35 YFHVNANYIVWKTNHFTIPKEQYTI--INRTASSVTFTDIASLNIQLTCNILTFGQLEQN 92
Query: 1873 SGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWI 1932
TI P P L W+ + + L+ T++ ++ +
Sbjct: 93 VYGITIISGLPPEKPKN-LSCIVNEGKKMRCEWDGGR-ETHLE-TNFTLKSEWATHKFAD 149
Query: 1933 CI-STTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYD--KPSPPG 1989
C + + V A N G P KP+PP
Sbjct: 150 CKAKRDTPTSCTVDYSTVYFVNIEVWVEAENALGKVTS-----DHINFDPVYKVKPNPPH 204
Query: 1990 IPVVTQVGG--DFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQ--IN 2045
V + L+W P I Y I + W ++ A ++
Sbjct: 205 NLSVINSEELSSILKLTWTNP-SIKSVIILKYNIQYRTKDASTWSQIPPEDTASTRSSFT 263
Query: 2046 IPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDP 2082
+ +L +Y FR+ E G S S
Sbjct: 264 VQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITY 300
Score = 90.3 bits (223), Expect = 2e-19
Identities = 39/229 (17%), Positives = 64/229 (27%), Gaps = 37/229 (16%)
Query: 898 VLDRPHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTKVSSYVTT 957
P P+NL G + W R+ TN+ ++ + + T
Sbjct: 100 SGLPPEKPKNLSCIVNEGKKMRCEWDGGRETHLE--TNFTLKSEWATHKFADCKAKRDTP 157
Query: 958 PFVRVR-NLAIGSTYEFRVMAENQYGLSKPA-LTIDPIKAKHPFDVPGAPGAPKGVDSTE 1015
V + E V AEN G + DP+ P + P +
Sbjct: 158 TSCTVDYSTVYFVNIEVWVEAENALGKVTSDHINFDPVYKVKP-NPPHNLSV-INSEELS 215
Query: 1016 DSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEGKSIGS 1075
+ L W+ P I +Y ++ R W + T + +
Sbjct: 216 SILKLTWTNPSIKSV-IILKYNIQYRTKDASTWSQIPPEDTASTRSSFTV---------- 264
Query: 1076 ERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPWSSSSD 1124
L EY FR+ + G+G WS S+
Sbjct: 265 --------------------QDLKPFTEYVFRIRCMKEDGKGYWSDWSE 293
Score = 85.3 bits (210), Expect = 1e-17
Identities = 33/264 (12%), Positives = 75/264 (28%), Gaps = 21/264 (7%)
Query: 1141 LSIRDMTVLAGEEFTIT-------VPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQTI 1193
+S V FT + + +W N + + + +
Sbjct: 9 ISPESPVVQLHSNFTAVCVLKEKCMDYFHVNANYIVWKTNHFTIPKEQYTIINRTASSVT 68
Query: 1194 YRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYVVDKPSPPQGPLDVSDITPESCSLSWK 1253
+ + ++ + I + + + P P+ L + W
Sbjct: 69 FTDIASLNI--QLTCNILTFGQLEQNVYGITIISGLPPEKPKN-LSCIVNEGKKMRCEWD 125
Query: 1254 PPLDDGGSPITNYVVEKYESATGFWS--KLSSFVRSPAYDVFGLETNRQYRFRVRAENQY 1311
+ TN+ + K E AT ++ K + + V AEN
Sbjct: 126 GGRETHLE--TNFTL-KSEWATHKFADCKAKRDTPTSCTVDYSTVYFVNIEVWVEAENAL 182
Query: 1312 GVSEPLELDNSITAKFPFTVPDPPGQPQI--VDWDTNNATLMWDRPRTDGGSKIQGYKML 1369
G ++ K P+PP + + ++ L W P ++ Y +
Sbjct: 183 GKVTSDHINFDPVYK---VKPNPPHNLSVINSEELSSILKLTWTNPSIKSVIILK-YNIQ 238
Query: 1370 LKTPTGELPTTIWSKIRPTSSTVY 1393
+T + I + ++ + +
Sbjct: 239 YRTKDASTWSQIPPEDTASTRSSF 262
Score = 78.3 bits (192), Expect = 2e-15
Identities = 48/313 (15%), Positives = 86/313 (27%), Gaps = 38/313 (12%)
Query: 90 KPDFIVPLKDLVVPLGKLLTLQC-------EATGTPVPKCRWLRNGREISSGARYRVETA 142
P + + VV L T C + W N I +Y +
Sbjct: 4 DPCGYISPESPVVQLHSNFTAVCVLKEKCMDYFHVNANYIVWKTNHFTIPK-EQYTIINR 62
Query: 143 GGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMPNALYIP------ 196
+ + + + + G PP + + +
Sbjct: 63 TASSVTFTDIASLNIQLTCNILTFGQLEQNVYGITIISGLPPEKPKNLSCIVNEGKKMRC 122
Query: 197 ---EGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGD 253
G T ++ + E + K D +D + F+ +
Sbjct: 123 EWDGGRETHLETNFT--LKSEWATHKFADCKAKRDTPTSCTVDYSTVYFV---------N 171
Query: 254 YTVNL--SNSSGSVS---GTFTINITGLPGPPIGP-LDVSEITKHTCTLHWNPPKYDGGL 307
V + N+ G V+ F P PP + SE L W P +
Sbjct: 172 IEVWVEAENALGKVTSDHINFDPVYKVKPNPPHNLSVINSEELSSILKLTWTNPSIKSVI 231
Query: 308 KVTHYVVERRDISMPHW---ICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLE 364
+ Y ++ R W T ++F VQ L EY+F + + E+G G +
Sbjct: 232 ILK-YNIQYRTKDASTWSQIPPEDTASTRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSD 290
Query: 365 GINPIKAKSPYDK 377
+ D+
Sbjct: 291 WSEEASGITYEDR 303
Score = 78.3 bits (192), Expect = 2e-15
Identities = 48/313 (15%), Positives = 86/313 (27%), Gaps = 38/313 (12%)
Query: 1697 KPDFIVPLKDLVVPLGKLLTLQC-------EATGTPVPKCRWLRNGREISSGARYRVETA 1749
P + + VV L T C + W N I +Y +
Sbjct: 4 DPCGYISPESPVVQLHSNFTAVCVLKEKCMDYFHVNANYIVWKTNHFTIPK-EQYTIINR 62
Query: 1750 GGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMPNALYIP------ 1803
+ + + + + G PP + + +
Sbjct: 63 TASSVTFTDIASLNIQLTCNILTFGQLEQNVYGITIISGLPPEKPKNLSCIVNEGKKMRC 122
Query: 1804 ---EGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGD 1860
G T ++ + E + K D +D + F+ +
Sbjct: 123 EWDGGRETHLETNFT--LKSEWATHKFADCKAKRDTPTSCTVDYSTVYFV---------N 171
Query: 1861 YTVNL--SNSSGSVS---GTFTINITGLPGPPIGP-LDVSEITKHTCTLHWNPPKYDGGL 1914
V + N+ G V+ F P PP + SE L W P +
Sbjct: 172 IEVWVEAENALGKVTSDHINFDPVYKVKPNPPHNLSVINSEELSSILKLTWTNPSIKSVI 231
Query: 1915 KVTHYVVERRDISMPHW---ICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLE 1971
+ Y ++ R W T ++F VQ L EY+F + + E+G G +
Sbjct: 232 ILK-YNIQYRTKDASTWSQIPPEDTASTRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSD 290
Query: 1972 GINPIKAKSPYDK 1984
+ D+
Sbjct: 291 WSEEASGITYEDR 303
Score = 71.8 bits (175), Expect = 3e-13
Identities = 46/289 (15%), Positives = 75/289 (25%), Gaps = 28/289 (9%)
Query: 497 NAQFQCTI-------TGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDAD 549
N C + I W I P ++ I + +
Sbjct: 21 NFTAVCVLKEKCMDYFHVNANYIVWKTNHFTI-PKEQYTIINRTASSVTFTDIASLNIQL 79
Query: 550 EYVCRAVNKGGVKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKIT 609
+ +I P+ K T T
Sbjct: 80 TCNILTFGQLEQNVYGITIISGLPPEKPKNLSCI-VNEGKKMRCEWDGGRETHLE----T 134
Query: 610 WYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAPY--RVVAENDLGM---DSAIVKI 664
+ + + D S V V AEN LG D
Sbjct: 135 NFTLKSEWATHKFADCKAKRDTPTSCTVDYSTVYFVNIEVWVEAENALGKVTSDHINFDP 194
Query: 665 QISDRPDPPQFPTVEDI--GHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSWIRVGNT 722
+P+PP +V + L L W P + Y ++ R S+W ++
Sbjct: 195 VYKVKPNPPHNLSVINSEELSSILKLTWTNPSIKSVIILK-YNIQYRTKDASTWSQIPPE 253
Query: 723 RF----TTMAITGLSPGHQYEFRVYAENVYGR---SDPSTTSDLITTKD 764
++ + L P +Y FR+ G+ SD S + IT +D
Sbjct: 254 DTASTRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYED 302
Score = 60.2 bits (145), Expect = 2e-09
Identities = 21/115 (18%), Positives = 42/115 (36%), Gaps = 10/115 (8%)
Query: 1207 SYTIQL--VNTVGSDSASCKVYVVD---KPSPPQGP-LDVSDITPESCSLSWKPPLDDGG 1260
+ + + N +G ++ + KP+PP + S+ L+W P
Sbjct: 171 NIEVWVEAENALGKVTSDHINFDPVYKVKPNPPHNLSVINSEELSSILKLTWTNP-SIKS 229
Query: 1261 SPITNYVVEKYESATGFWSKLSSF---VRSPAYDVFGLETNRQYRFRVRAENQYG 1312
I Y ++ WS++ ++ V L+ +Y FR+R + G
Sbjct: 230 VIILKYNIQYRTKDASTWSQIPPEDTASTRSSFTVQDLKPFTEYVFRIRCMKEDG 284
Score = 37.1 bits (85), Expect = 0.056
Identities = 18/66 (27%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 22 YIIERREVGGAIW--LKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGK------SEP 73
Y I+ R + W + D SF+V +L +Y FRI + GK SE
Sbjct: 235 YNIQYRTKDASTWSQIPPEDTASTRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEE 294
Query: 74 SICTTP 79
+ T
Sbjct: 295 ASGITY 300
Score = 36.0 bits (82), Expect = 0.14
Identities = 22/140 (15%), Positives = 36/140 (25%), Gaps = 50/140 (35%)
Query: 1553 SLTSKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYV 1612
+L+ + + L W+ P I +Y ++ R W + T
Sbjct: 205 NLSVINSEELSSILKLTWTNPSIKSV-IILKYNIQYRTKDASTWSQIPPEDTASTR---- 259
Query: 1613 LWVSEGKSIGSERGSTAQFLEREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAV 1672
SF+V +L +Y FRI +
Sbjct: 260 ---------------------------------------SSFTVQDLKPFTEYVFRIRCM 280
Query: 1673 NAIGK------SEPSICTTP 1686
GK SE + T
Sbjct: 281 KEDGKGYWSDWSEEASGITY 300
Score = 33.6 bits (76), Expect = 0.70
Identities = 8/110 (7%), Positives = 23/110 (20%), Gaps = 10/110 (9%)
Query: 1430 RDITVKAGEDFSIH-------VPFMAFPQPAAFWFANDSIIDDSDTRVHKQLTMNSASLV 1482
V+ +F+ + + W N I + + +
Sbjct: 12 ESPVVQLHSNFTAVCVLKEKCMDYFHVNANYIVWKTNHFTIPKEQYTIINRTASSVTFTD 71
Query: 1483 VKNSQRSDGGQYRLQLKNPAGFDTATLHSRLRTLPD-SVNPRCHLPSSTS 1531
+ + + + + P+ N C +
Sbjct: 72 IASLN--IQLTCNILTFGQLEQNVYGITIISGLPPEKPKNLSCIVNEGKK 119
Score = 31.3 bits (70), Expect = 3.9
Identities = 13/63 (20%), Positives = 22/63 (34%), Gaps = 3/63 (4%)
Query: 22 YIIERREVGGAIWLKCNDYNVLECSFSV-LNLVEGNDYEFRIIAVNAIGKSEPS-ICTTP 79
+ ++ + C S +V + V + E + A NA+GK I P
Sbjct: 136 FTLKSEWATHK-FADCKAKRDTPTSCTVDYSTVYFVNIEVWVEAENALGKVTSDHINFDP 194
Query: 80 VKI 82
V
Sbjct: 195 VYK 197
Score = 30.2 bits (67), Expect = 8.3
Identities = 15/60 (25%), Positives = 22/60 (36%), Gaps = 2/60 (3%)
Query: 1632 LEREVGGAIWLKCNDYNVLECSFSV-LNLVEGNDYEFRIIAVNAIGKSEPS-ICTTPVKI 1689
L+ E + C S +V + V + E + A NA+GK I PV
Sbjct: 138 LKSEWATHKFADCKAKRDTPTSCTVDYSTVYFVNIEVWVEAENALGKVTSDHINFDPVYK 197
>2db8_A Tripartite motif protein 9, isoform 2; ring finger protein 91,
TRIM9, KIAA0282, RNF91, structural genomics, NPPSFA; NMR
{Homo sapiens}
Length = 110
Score = 96.0 bits (239), Expect = 2e-23
Identities = 24/97 (24%), Positives = 35/97 (36%), Gaps = 2/97 (2%)
Query: 670 PDPPQF-PTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSWIRVGNTRFTTMA 728
P P ++S L W+ P YI+E + + V + T
Sbjct: 10 PATPILQLEECCTHNNSATLSWKQPP-LSTVPADGYILELDDGNGGQFREVYVGKETMCT 68
Query: 729 ITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKDT 765
+ GL Y RV A N G S S T L T++ +
Sbjct: 69 VDGLHFNSTYNARVKAFNKTGVSPYSKTLVLQTSEGS 105
Score = 92.5 bits (230), Expect = 4e-22
Identities = 26/96 (27%), Positives = 41/96 (42%), Gaps = 2/96 (2%)
Query: 1231 PSPPQGPLDVSDITPESCSLSWKPPLDDGGSPITNYVVEKYESATGFWSKLSSFVRSPAY 1290
P+ P L+ S +LSWK P P Y++E + G + ++ +
Sbjct: 10 PATPILQLEECCTHNNSATLSWKQPPLST-VPADGYILELDDGNGGQFREVYV-GKETMC 67
Query: 1291 DVFGLETNRQYRFRVRAENQYGVSEPLELDNSITAK 1326
V GL N Y RV+A N+ GVS + T++
Sbjct: 68 TVDGLHFNSTYNARVKAFNKTGVSPYSKTLVLQTSE 103
Score = 90.2 bits (224), Expect = 2e-21
Identities = 22/108 (20%), Positives = 38/108 (35%), Gaps = 5/108 (4%)
Query: 275 GLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHDT 334
+P PI L+ ++ TL W P Y++E D + + + +T
Sbjct: 8 PVPATPILQLEECCTHNNSATLSWKQPPLSTV-PADGYILELDDGNGGQFREV-YVGKET 65
Query: 335 TFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPG 382
V GL Y V A N+ G+ P + + ++ G
Sbjct: 66 MCTVDGLHFNSTYNARVKAFNKTGVSPYSK---TLVLQTSEGSGPSSG 110
Score = 90.2 bits (224), Expect = 2e-21
Identities = 22/108 (20%), Positives = 38/108 (35%), Gaps = 5/108 (4%)
Query: 1882 GLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHDT 1941
+P PI L+ ++ TL W P Y++E D + + + +T
Sbjct: 8 PVPATPILQLEECCTHNNSATLSWKQPPLSTV-PADGYILELDDGNGGQFREV-YVGKET 65
Query: 1942 TFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPG 1989
V GL Y V A N+ G+ P + + ++ G
Sbjct: 66 MCTVDGLHFNSTYNARVKAFNKTGVSPYSK---TLVLQTSEGSGPSSG 110
Score = 79.0 bits (195), Expect = 2e-17
Identities = 25/86 (29%), Positives = 33/86 (38%), Gaps = 3/86 (3%)
Query: 902 PHPPE-NLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTKVSSYVTTPFV 960
P P L +S TL W P + Y++E D N + +V T
Sbjct: 10 PATPILQLEECCTHNNSATLSWKQPPLST-VPADGYILELDDGNGGQFREVYVGKETMCT 68
Query: 961 RVRNLAIGSTYEFRVMAENQYGLSKP 986
V L STY RV A N+ G+S
Sbjct: 69 -VDGLHFNSTYNARVKAFNKTGVSPY 93
Score = 77.1 bits (190), Expect = 1e-16
Identities = 23/132 (17%), Positives = 38/132 (28%), Gaps = 36/132 (27%)
Query: 995 AKHPFDVPGAP-GAPKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASM 1053
+ VP P + + +S +L W +P P YI+E + ++ +
Sbjct: 3 SGSSGPVPATPILQLEECCTHNNSATLSWKQPP-LSTVPADGYILELDDGNGGQFREV-- 59
Query: 1054 AHIPDTSLKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNA 1113
+T V L N Y RV A N
Sbjct: 60 YVGKETMCT--------------------------------VDGLHFNSTYNARVKAFNK 87
Query: 1114 AGQGPWSSSSDI 1125
G P+S + +
Sbjct: 88 TGVSPYSKTLVL 99
Score = 74.8 bits (184), Expect = 6e-16
Identities = 20/98 (20%), Positives = 34/98 (34%), Gaps = 4/98 (4%)
Query: 371 AKSPYDKPSPPGI-PVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNV 429
+ S P+ P + + LSW +P GY ++ + ++ V V
Sbjct: 3 SGSSGPVPATPILQLEECCTHNNSATLSWKQPPLST-VPADGYILELDDGNGGQFREVYV 61
Query: 430 AICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSAS 467
+ + L Y RV A N+ G+S S
Sbjct: 62 --GKETMCTVDGLHFNSTYNARVKAFNKTGVSPYSKTL 97
Score = 74.8 bits (184), Expect = 6e-16
Identities = 20/98 (20%), Positives = 34/98 (34%), Gaps = 4/98 (4%)
Query: 1978 AKSPYDKPSPPGI-PVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNV 2036
+ S P+ P + + LSW +P GY ++ + ++ V V
Sbjct: 3 SGSSGPVPATPILQLEECCTHNNSATLSWKQPPLST-VPADGYILELDDGNGGQFREVYV 61
Query: 2037 AICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSAS 2074
+ + L Y RV A N+ G+S S
Sbjct: 62 --GKETMCTVDGLHFNSTYNARVKAFNKTGVSPYSKTL 97
Score = 60.2 bits (146), Expect = 8e-11
Identities = 19/123 (15%), Positives = 31/123 (25%), Gaps = 48/123 (39%)
Query: 1559 VDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEG 1618
+ +S +L W +P P YI+E + ++ +
Sbjct: 20 CCTHNNSATLSWKQPP-LSTVPADGYILELDDGNGGQFRE-------------------- 58
Query: 1619 KSIGSERGSTAQFLEREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKS 1678
Y E +V L + Y R+ A N G S
Sbjct: 59 ---------------------------VYVGKETMCTVDGLHFNSTYNARVKAFNKTGVS 91
Query: 1679 EPS 1681
S
Sbjct: 92 PYS 94
Score = 59.0 bits (143), Expect = 2e-10
Identities = 16/55 (29%), Positives = 23/55 (41%), Gaps = 2/55 (3%)
Query: 20 DCYIIERREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPS 74
D YI+E + G + + Y E +V L + Y R+ A N G S S
Sbjct: 42 DGYILELDDGNGGQFREV--YVGKETMCTVDGLHFNSTYNARVKAFNKTGVSPYS 94
Score = 40.9 bits (96), Expect = 4e-04
Identities = 15/71 (21%), Positives = 25/71 (35%), Gaps = 6/71 (8%)
Query: 1324 TAKFPFTVPDPP-GQPQIVDWDTNNATLMWDRPRTDGGSKIQGYKMLLKTPTGELPTTIW 1382
++ VP P Q + N+ATL W +P GY + L G +
Sbjct: 2 SSGSSGPVPATPILQLEECCTHNNSATLSWKQPP-LSTVPADGYILELDDGNGG----QF 56
Query: 1383 SKIRPTSSTVY 1393
++ T+
Sbjct: 57 REVYVGKETMC 67
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2
calmodulin-like EF...; structural genomics, protist
parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa
II}
Length = 345
Score = 102 bits (257), Expect = 2e-23
Identities = 25/89 (28%), Positives = 45/89 (50%), Gaps = 5/89 (5%)
Query: 814 KTSSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVS-----HNLEKELIRKEI 868
+ Y + IG G++GVV E +T I A K + + + + E I+ E+
Sbjct: 20 SLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEV 79
Query: 869 DIMNQLHHPKLINLHDAFEDDDEMVLIFE 897
+M +LHHP + L++ +ED+ + L+ E
Sbjct: 80 RLMKKLHHPNIARLYEVYEDEQYICLVME 108
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta
7 linker; phosphorylation, cytosolic,
transferase-transferase inhibitor complex; HET: DB8;
3.55A {Homo sapiens}
Length = 444
Score = 103 bits (258), Expect = 8e-23
Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Query: 813 IKTSSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSH--NLEKELIRKEIDI 870
I + + Y + EE+G GAF VV RC + G +AA I + + + +E I
Sbjct: 4 ITCTRFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARI 63
Query: 871 MNQLHHPKLINLHDAFEDDDEMVLIFE 897
L HP ++ LHD+ ++ LIF+
Sbjct: 64 CRLLKHPNIVRLHDSISEEGHHYLIFD 90
>1bqu_A Protein (GP130); cytokine receptor, glycoprotein 130, interleukine 6
R beta subunit, signaling protein; 2.00A {Homo sapiens}
SCOP: b.1.2.1 b.1.2.1 PDB: 1pvh_A 1bj8_A
Length = 215
Score = 97.7 bits (243), Expect = 8e-23
Identities = 40/237 (16%), Positives = 66/237 (27%), Gaps = 39/237 (16%)
Query: 902 PHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTKVSSYVTTPF-- 959
P P+NL G + W R+ TN+ ++ + + + TP
Sbjct: 8 PEKPKNLSCIVNEGKKMRCEWDGGRETHLE--TNFTLKSEWATHK-FADCKAKRDTPTSC 64
Query: 960 VRVRNLAIGSTYEFRVMAENQYGLSKPA-LTIDPIKAKHPFDVPGAPGAPKGVDSTEDSI 1018
+ E V AEN G + DP+ P + P + +
Sbjct: 65 TVDYSTVYFVNIEVWVEAENALGKVTSDHINFDPVYKVKP-NPPHNLSV-INSEELSSIL 122
Query: 1019 SLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEGKSIGSERG 1078
L W+ P I +Y ++ R W + T + +
Sbjct: 123 KLTWTNPSI-KSVIILKYNIQYRTKDASTWSQIPPEDTASTRSSFTV------------- 168
Query: 1079 STAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPWSSSSDIIMCCAPPCAP 1135
L EY FR+ + G+G WS S+ P
Sbjct: 169 -----------------QDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYEDRP 208
Score = 97.4 bits (242), Expect = 1e-22
Identities = 37/215 (17%), Positives = 64/215 (29%), Gaps = 17/215 (7%)
Query: 279 PPIGPLDVSEITKHTC--TLHWNPPKYDGGLKVTHYVVERRDISMPHWICI-STTCHDTT 335
PP P ++S I W+ + + L+ T++ ++ + C +
Sbjct: 7 PPEKPKNLSCIVNEGKKMRCEWDGGR-ETHLE-TNFTLKSEWATHKFADCKAKRDTPTSC 64
Query: 336 FIVQGLTEGQEYLFHVMAVNENGMGPPLEG-INPIKAKSPYDKPSPPGIPVVTQVGG--D 392
+ V A N G +P+ KP+PP V
Sbjct: 65 TVDYSTVYFVNIEVWVEAENALGKVTSDHINFDPVY----KVKPNPPHNLSVINSEELSS 120
Query: 393 FVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQ--INIPNLIEGRQYEF 450
+ L+W P I Y I + W ++ A ++ + +L +Y F
Sbjct: 121 ILKLTWTNP-SIKSVIILKYNIQYRTKDASTWSQIPPEDTASTRSSFTVQDLKPFTEYVF 179
Query: 451 RVYAQNEAGLSLPSSASNSVQIKDPMAA--KAPEI 483
R+ E G S S K P
Sbjct: 180 RIRCMKEDGKGYWSDWSEEASGITYEDRPSKEPSF 214
Score = 97.4 bits (242), Expect = 1e-22
Identities = 37/215 (17%), Positives = 64/215 (29%), Gaps = 17/215 (7%)
Query: 1886 PPIGPLDVSEITKHTC--TLHWNPPKYDGGLKVTHYVVERRDISMPHWICI-STTCHDTT 1942
PP P ++S I W+ + + L+ T++ ++ + C +
Sbjct: 7 PPEKPKNLSCIVNEGKKMRCEWDGGR-ETHLE-TNFTLKSEWATHKFADCKAKRDTPTSC 64
Query: 1943 FIVQGLTEGQEYLFHVMAVNENGMGPPLEG-INPIKAKSPYDKPSPPGIPVVTQVGG--D 1999
+ V A N G +P+ KP+PP V
Sbjct: 65 TVDYSTVYFVNIEVWVEAENALGKVTSDHINFDPVY----KVKPNPPHNLSVINSEELSS 120
Query: 2000 FVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQ--INIPNLIEGRQYEF 2057
+ L+W P I Y I + W ++ A ++ + +L +Y F
Sbjct: 121 ILKLTWTNP-SIKSVIILKYNIQYRTKDASTWSQIPPEDTASTRSSFTVQDLKPFTEYVF 179
Query: 2058 RVYAQNEAGLSLPSSASNSVQIKDPMAA--KAPEI 2090
R+ E G S S K P
Sbjct: 180 RIRCMKEDGKGYWSDWSEEASGITYEDRPSKEPSF 214
Score = 64.2 bits (156), Expect = 3e-11
Identities = 28/125 (22%), Positives = 45/125 (36%), Gaps = 10/125 (8%)
Query: 648 RVVAENDLGM---DSAIVKIQISDRPDPPQFPTVEDIG--HDSLALVWRAPIWDGGSNIT 702
V AEN LG D +P+PP +V + L L W P I
Sbjct: 79 WVEAENALGKVTSDHINFDPVYKVKPNPPHNLSVINSEELSSILKLTWTNPSIKSVI-IL 137
Query: 703 NYIVEKREHPMSSWIRVGNTRF----TTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSD 758
Y ++ R S+W ++ ++ + L P +Y FR+ G+ S S+
Sbjct: 138 KYNIQYRTKDASTWSQIPPEDTASTRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSE 197
Query: 759 LITTK 763
+
Sbjct: 198 EASGI 202
Score = 63.5 bits (154), Expect = 5e-11
Identities = 30/134 (22%), Positives = 46/134 (34%), Gaps = 8/134 (5%)
Query: 255 TVNLSNSSGSVS---GTFTINITGLPGPPIGP-LDVSEITKHTCTLHWNPPKYDGGLKVT 310
V N+ G V+ F P PP + SE L W P + +
Sbjct: 79 WVEAENALGKVTSDHINFDPVYKVKPNPPHNLSVINSEELSSILKLTWTNPSIKSVI-IL 137
Query: 311 HYVVERRDISMPHW---ICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGIN 367
Y ++ R W T ++F VQ L EY+F + + E+G G +
Sbjct: 138 KYNIQYRTKDASTWSQIPPEDTASTRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSE 197
Query: 368 PIKAKSPYDKPSPP 381
+ D+PS
Sbjct: 198 EASGITYEDRPSKE 211
Score = 63.5 bits (154), Expect = 5e-11
Identities = 30/134 (22%), Positives = 46/134 (34%), Gaps = 8/134 (5%)
Query: 1862 TVNLSNSSGSVS---GTFTINITGLPGPPIGP-LDVSEITKHTCTLHWNPPKYDGGLKVT 1917
V N+ G V+ F P PP + SE L W P + +
Sbjct: 79 WVEAENALGKVTSDHINFDPVYKVKPNPPHNLSVINSEELSSILKLTWTNPSIKSVI-IL 137
Query: 1918 HYVVERRDISMPHW---ICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGIN 1974
Y ++ R W T ++F VQ L EY+F + + E+G G +
Sbjct: 138 KYNIQYRTKDASTWSQIPPEDTASTRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSE 197
Query: 1975 PIKAKSPYDKPSPP 1988
+ D+PS
Sbjct: 198 EASGITYEDRPSKE 211
Score = 63.1 bits (153), Expect = 7e-11
Identities = 24/141 (17%), Positives = 48/141 (34%), Gaps = 13/141 (9%)
Query: 1207 SYTIQL--VNTVGSDSASCKVYVVD---KPSPPQGP-LDVSDITPESCSLSWKPPLDDGG 1260
+ + + N +G ++ + KP+PP + S+ L+W P
Sbjct: 75 NIEVWVEAENALGKVTSDHINFDPVYKVKPNPPHNLSVINSEELSSILKLTWTNP-SIKS 133
Query: 1261 SPITNYVVEKYESATGFWSKLSSF---VRSPAYDVFGLETNRQYRFRVRAENQYGVSEPL 1317
I Y ++ WS++ ++ V L+ +Y FR+R + G
Sbjct: 134 VIILKYNIQYRTKDASTWSQIPPEDTASTRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWS 193
Query: 1318 ELDNSITAKFPFTVPDPPGQP 1338
+ + T D P +
Sbjct: 194 DWSEEASGI---TYEDRPSKE 211
Score = 60.4 bits (146), Expect = 7e-10
Identities = 34/217 (15%), Positives = 66/217 (30%), Gaps = 32/217 (14%)
Query: 1233 PPQGPLDVSDITPESCSL--SWKPPLDDGGSPITNYVVEKYESATGFWS--KLSSFVRSP 1288
PP+ P ++S I E + W + TN+ + K E AT ++ K +
Sbjct: 7 PPEKPKNLSCIVNEGKKMRCEWDGGRETH--LETNFTL-KSEWATHKFADCKAKRDTPTS 63
Query: 1289 AYDVFGLETNRQYRFRVRAENQYGVSEPLELDNSITAKFPFTVPDPPGQPQI--VDWDTN 1346
+ V AEN G ++ K P+PP + + ++
Sbjct: 64 CTVDYSTVYFVNIEVWVEAENALGKVTSDHINFDPVYKVK---PNPPHNLSVINSEELSS 120
Query: 1347 NATLMWDRPRTDGGSKIQGYKMLLKTPTGELPTTIWSKIRPTSST--------------- 1391
L W P ++ Y + +T + I + ++ +
Sbjct: 121 ILKLTWTNPSIKSVIILK-YNIQYRTKDASTWSQIPPEDTASTRSSFTVQDLKPFTEYVF 179
Query: 1392 -VYCKDTTMNSSNSEPGKQSGPVIVEEQPNKPVMDLS 1427
+ C S+ S ++P + S
Sbjct: 180 RIRCMKEDGKGYWSDW---SEEASGITYEDRPSKEPS 213
Score = 53.1 bits (127), Expect = 2e-07
Identities = 24/121 (19%), Positives = 43/121 (35%), Gaps = 6/121 (4%)
Query: 890 DEMVLIFEVLDRPHPPENLHAD--EFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTV 947
D + +P+PP NL E L L WT P I Y ++ + +++
Sbjct: 92 DHINFDPVYKVKPNPPHNLSVINSEELSSILKLTWTNPS-IKSVIILKYNIQYRTKDAST 150
Query: 948 WTKVSSYVTTPF---VRVRNLAIGSTYEFRVMAENQYGLSKPALTIDPIKAKHPFDVPGA 1004
W+++ T V++L + Y FR+ + G + + D P
Sbjct: 151 WSQIPPEDTASTRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYEDRPSK 210
Query: 1005 P 1005
Sbjct: 211 E 211
Score = 43.1 bits (101), Expect = 4e-04
Identities = 12/90 (13%), Positives = 23/90 (25%), Gaps = 4/90 (4%)
Query: 670 PDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSW--IRVGNTRFTTM 727
P+ P+ + + W TN+ ++ +T +
Sbjct: 8 PEKPKNLSCIVNEGKKMRCEWDGGRETHLE--TNFTLKSEWATHKFADCKAKRDTPTSCT 65
Query: 728 AITGLSPGHQYEFRVYAENVYGRSDPSTTS 757
E V AEN G+ +
Sbjct: 66 VDYSTVYFVNIEVWVEAENALGKVTSDHIN 95
Score = 37.3 bits (86), Expect = 0.034
Identities = 18/66 (27%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 22 YIIERREVGGAIW--LKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGK------SEP 73
Y I+ R + W + D SF+V +L +Y FRI + GK SE
Sbjct: 139 YNIQYRTKDASTWSQIPPEDTASTRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEE 198
Query: 74 SICTTP 79
+ T
Sbjct: 199 ASGITY 204
Score = 36.1 bits (83), Expect = 0.081
Identities = 22/140 (15%), Positives = 36/140 (25%), Gaps = 50/140 (35%)
Query: 1553 SLTSKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYV 1612
+L+ + + L W+ P I +Y ++ R W + T
Sbjct: 109 NLSVINSEELSSILKLTWTNPSI-KSVIILKYNIQYRTKDASTWSQIPPEDTASTR---- 163
Query: 1613 LWVSEGKSIGSERGSTAQFLEREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAV 1672
SF+V +L +Y FRI +
Sbjct: 164 ---------------------------------------SSFTVQDLKPFTEYVFRIRCM 184
Query: 1673 NAIGK------SEPSICTTP 1686
GK SE + T
Sbjct: 185 KEDGKGYWSDWSEEASGITY 204
Score = 33.0 bits (75), Expect = 0.68
Identities = 10/63 (15%), Positives = 18/63 (28%), Gaps = 1/63 (1%)
Query: 22 YIIERREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPS-ICTTPV 80
+ ++ + + V + E + A NA+GK I PV
Sbjct: 40 FTLKSEWATHKFADCKAKRDTPTSCTVDYSTVYFVNIEVWVEAENALGKVTSDHINFDPV 99
Query: 81 KIC 83
Sbjct: 100 YKV 102
Score = 32.7 bits (74), Expect = 0.95
Identities = 14/68 (20%), Positives = 23/68 (33%), Gaps = 5/68 (7%)
Query: 1328 PFTVPDPPGQPQIVDWDTNNA---TLMWDRPRTDGGSKIQGYKMLLKTPTGELPTTIWSK 1384
P + PP +P+ + N WD R + + + T + +
Sbjct: 1 PGSSGLPPEKPKNLSCIVNEGKKMRCEWDGGRETHLE--TNFTLKSEWATHKFADCKAKR 58
Query: 1385 IRPTSSTV 1392
PTS TV
Sbjct: 59 DTPTSCTV 66
Score = 30.7 bits (69), Expect = 3.7
Identities = 16/66 (24%), Positives = 23/66 (34%), Gaps = 2/66 (3%)
Query: 1627 STAQFLEREVGGAIWLKCNDYNVLECSFSV-LNLVEGNDYEFRIIAVNAIGKSEPS-ICT 1684
T L+ E + C S +V + V + E + A NA+GK I
Sbjct: 37 ETNFTLKSEWATHKFADCKAKRDTPTSCTVDYSTVYFVNIEVWVEAENALGKVTSDHINF 96
Query: 1685 TPVKIC 1690
PV
Sbjct: 97 DPVYKV 102
>2kbg_A N-CAM 2, neural cell adhesion molecule 2; fibronectin type III
module, beta-sheet sandwich, cell membrane, glycoprotein,
immunoglobulin domain; NMR {Homo sapiens}
Length = 114
Score = 94.5 bits (235), Expect = 8e-23
Identities = 27/110 (24%), Positives = 43/110 (39%), Gaps = 5/110 (4%)
Query: 1227 VVDKPSPPQGPLDVSDITPESCSLSWKPPLDDGGSPITNYVVEKYESATGFWSKLSSF-V 1285
+ +PSPP + + +S LS DDGG+PI Y+V+
Sbjct: 5 SMREPSPPS--IHGQPSSGKSFKLSITKQ-DDGGAPILEYIVKYRSKDKEDQWLEKKVQG 61
Query: 1286 RSPAYDVFGLETNRQYRFRVRAENQYGVSEPLELDNSITAKFPFTVPDPP 1335
+ L+ Y ++ A N+ G SEP + S+ K P + D
Sbjct: 62 NKDHIILEHLQWTMGYEVQITAANRLGYSEPTVYEFSMPPK-PNIIKDHH 110
Score = 91.1 bits (226), Expect = 1e-21
Identities = 23/110 (20%), Positives = 34/110 (30%), Gaps = 4/110 (3%)
Query: 668 DRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSWIRVGNT--RFT 725
P PP + S L DGG+ I YIV+ R
Sbjct: 7 REPSPPSIH-GQPSSGKSFKLSITKQD-DGGAPILEYIVKYRSKDKEDQWLEKKVQGNKD 64
Query: 726 TMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKDTFKKQIKKRQY 775
+ + L YE ++ A N G S+P+ + K K +
Sbjct: 65 HIILEHLQWTMGYEVQITAANRLGYSEPTVYEFSMPPKPNIIKDHHHHHH 114
Score = 89.9 bits (223), Expect = 3e-21
Identities = 26/109 (23%), Positives = 40/109 (36%), Gaps = 2/109 (1%)
Query: 370 KAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNV 429
+A++ +PSPP I G LS DDGG+ I Y + +
Sbjct: 1 EAEASMREPSPPSIHG-QPSSGKSFKLSI-TKQDDGGAPILEYIVKYRSKDKEDQWLEKK 58
Query: 430 AICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAA 478
I + +L YE ++ A N G S P+ S+ K +
Sbjct: 59 VQGNKDHIILEHLQWTMGYEVQITAANRLGYSEPTVYEFSMPPKPNIIK 107
Score = 89.9 bits (223), Expect = 3e-21
Identities = 26/109 (23%), Positives = 40/109 (36%), Gaps = 2/109 (1%)
Query: 1977 KAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNV 2036
+A++ +PSPP I G LS DDGG+ I Y + +
Sbjct: 1 EAEASMREPSPPSIHG-QPSSGKSFKLSI-TKQDDGGAPILEYIVKYRSKDKEDQWLEKK 58
Query: 2037 AICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAA 2085
I + +L YE ++ A N G S P+ S+ K +
Sbjct: 59 VQGNKDHIILEHLQWTMGYEVQITAANRLGYSEPTVYEFSMPPKPNIIK 107
Score = 88.4 bits (219), Expect = 1e-20
Identities = 23/104 (22%), Positives = 41/104 (39%), Gaps = 3/104 (2%)
Query: 897 EVLDRPHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTKVSSY-V 955
+ P PP ++H +G S L T D GG+ I Y+V+ + +
Sbjct: 4 ASMREPSPP-SIHGQPSSGKSFKLSITKQDD-GGAPILEYIVKYRSKDKEDQWLEKKVQG 61
Query: 956 TTPFVRVRNLAIGSTYEFRVMAENQYGLSKPALTIDPIKAKHPF 999
+ + +L YE ++ A N+ G S+P + + K
Sbjct: 62 NKDHIILEHLQWTMGYEVQITAANRLGYSEPTVYEFSMPPKPNI 105
Score = 85.7 bits (212), Expect = 1e-19
Identities = 20/109 (18%), Positives = 32/109 (29%), Gaps = 11/109 (10%)
Query: 277 PGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHW-ICISTTCHDTT 335
P PP + + + L DGG + Y+V+ R + +
Sbjct: 9 PSPPS--IHGQPSSGKSFKLSITKQ-DDGGAPILEYIVKYRSKDKEDQWLEKKVQGNKDH 65
Query: 336 FIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIP 384
I++ L Y + A N G P + K P I
Sbjct: 66 IILEHLQWTMGYEVQITAANRLGYSEPTVYEFSMPPK-------PNIIK 107
Score = 85.7 bits (212), Expect = 1e-19
Identities = 20/109 (18%), Positives = 32/109 (29%), Gaps = 11/109 (10%)
Query: 1884 PGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHW-ICISTTCHDTT 1942
P PP + + + L DGG + Y+V+ R + +
Sbjct: 9 PSPPS--IHGQPSSGKSFKLSITKQ-DDGGAPILEYIVKYRSKDKEDQWLEKKVQGNKDH 65
Query: 1943 FIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIP 1991
I++ L Y + A N G P + K P I
Sbjct: 66 IILEHLQWTMGYEVQITAANRLGYSEPTVYEFSMPPK-------PNIIK 107
Score = 83.3 bits (206), Expect = 7e-19
Identities = 24/142 (16%), Positives = 37/142 (26%), Gaps = 35/142 (24%)
Query: 994 KAKHPFDVPGAPGAPKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASM 1053
+A+ P P G S+ S L + DGG+PI YIV+ R +
Sbjct: 1 EAEASMREPSPPSIH-GQPSSGKSFKLSI-TKQDDGGAPILEYIVKYRSKDKEDQWLE-- 56
Query: 1054 AHIPDTSLKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNA 1113
+ + + L YE ++ A N
Sbjct: 57 KKVQGNKDHII------------------------------LEHLQWTMGYEVQITAANR 86
Query: 1114 AGQGPWSSSSDIIMCCAPPCAP 1135
G + M P
Sbjct: 87 LGYSEPTVYEF-SMPPKPNIIK 107
Score = 70.6 bits (173), Expect = 2e-14
Identities = 23/132 (17%), Positives = 35/132 (26%), Gaps = 46/132 (34%)
Query: 1557 KGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVS 1616
G S+ S L + DGG+PI YIV+ R +
Sbjct: 15 HGQPSSGKSFKLSI-TKQDDGGAPILEYIVKYRSKDKEDQWLEKKVQGNKDH-------- 65
Query: 1617 EGKSIGSERGSTAQFLEREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIG 1676
+ +L YE +I A N +G
Sbjct: 66 -------------------------------------IILEHLQWTMGYEVQITAANRLG 88
Query: 1677 KSEPSICTTPVK 1688
SEP++ +
Sbjct: 89 YSEPTVYEFSMP 100
Score = 63.3 bits (154), Expect = 7e-12
Identities = 13/60 (21%), Positives = 23/60 (38%)
Query: 22 YIIERREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPSICTTPVK 81
YI++ R + + +L YE +I A N +G SEP++ +
Sbjct: 41 YIVKYRSKDKEDQWLEKKVQGNKDHIILEHLQWTMGYEVQITAANRLGYSEPTVYEFSMP 100
Score = 37.9 bits (88), Expect = 0.006
Identities = 9/39 (23%), Positives = 12/39 (30%), Gaps = 3/39 (7%)
Query: 1330 TVPDPPGQPQI--VDWDTNNATLMWDRPRTDGGSKIQGY 1366
P P I + L + DGG+ I Y
Sbjct: 4 ASMREPSPPSIHGQPSSGKSFKLSI-TKQDDGGAPILEY 41
>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET,
muscle protein; NMR {Caenorhabditis elegans} SCOP:
b.1.1.4 PDB: 1wiu_A
Length = 93
Score = 93.5 bits (233), Expect = 9e-23
Identities = 20/94 (21%), Positives = 34/94 (36%), Gaps = 3/94 (3%)
Query: 573 APKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSERHA 632
PK R G +++ F G P P TW + V+
Sbjct: 2 KPKILTASR---KIKIKAGFTHNLEVDFIGAPDPTATWTVGDSGAALAPELLVDAKSSTT 58
Query: 633 ILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQI 666
+ A D+ Y++ +N+LG D AI ++ +
Sbjct: 59 SIFFPSAKRADSGNYKLKVKNELGEDEAIFEVIV 92
Score = 93.5 bits (233), Expect = 1e-22
Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 3/94 (3%)
Query: 1134 APKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQTI 1193
PKI + R + + AG + V F G P PT WTV + + + + T
Sbjct: 2 KPKILTAS--RKIKIKAGFTHNLEVDFIGAPDPTATWTVGDSGAALAPELLVDAKSSTTS 59
Query: 1194 YRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYV 1227
SAKRA DSG+Y +++ N +G D A +V V
Sbjct: 60 IFFPSAKRA-DSGNYKLKVKNELGEDEAIFEVIV 92
Score = 92.8 bits (231), Expect = 2e-22
Identities = 16/91 (17%), Positives = 30/91 (32%)
Query: 90 KPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLH 149
KP + + + + G L+ + G P P W + V+ +
Sbjct: 2 KPKILTASRKIKIKAGFTHNLEVDFIGAPDPTATWTVGDSGAALAPELLVDAKSSTTSIF 61
Query: 150 FNEVTDVDNGDYTCEAYNSVGFAHTSSRVKI 180
F D+G+Y + N +G V +
Sbjct: 62 FPSAKRADSGNYKLKVKNELGEDEAIFEVIV 92
Score = 92.8 bits (231), Expect = 2e-22
Identities = 16/91 (17%), Positives = 30/91 (32%)
Query: 1697 KPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLH 1756
KP + + + + G L+ + G P P W + V+ +
Sbjct: 2 KPKILTASRKIKIKAGFTHNLEVDFIGAPDPTATWTVGDSGAALAPELLVDAKSSTTSIF 61
Query: 1757 FNEVTDVDNGDYTCEAYNSVGFAHTSSRVKI 1787
F D+G+Y + N +G V +
Sbjct: 62 FPSAKRADSGNYKLKVKNELGEDEAIFEVIV 92
Score = 92.0 bits (229), Expect = 3e-22
Identities = 18/91 (19%), Positives = 32/91 (35%)
Query: 480 APEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLI 539
P+I+ R + G P PT +W G + + A+ T ++
Sbjct: 2 KPKILTASRKIKIKAGFTHNLEVDFIGAPDPTATWTVGDSGAALAPELLVDAKSSTTSIF 61
Query: 540 INSVYGVDADEYVCRAVNKGGVKSTKAELII 570
S D+ Y + N+ G E+I+
Sbjct: 62 FPSAKRADSGNYKLKVKNELGEDEAIFEVIV 92
Score = 92.0 bits (229), Expect = 3e-22
Identities = 18/91 (19%), Positives = 32/91 (35%)
Query: 2087 APEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLI 2146
P+I+ R + G P PT +W G + + A+ T ++
Sbjct: 2 KPKILTASRKIKIKAGFTHNLEVDFIGAPDPTATWTVGDSGAALAPELLVDAKSSTTSIF 61
Query: 2147 INSVYGVDADEYVCRAVNKGGVKSTKAELII 2177
S D+ Y + N+ G E+I+
Sbjct: 62 FPSAKRADSGNYKLKVKNELGEDEAIFEVIV 92
Score = 77.0 bits (190), Expect = 6e-17
Identities = 14/91 (15%), Positives = 29/91 (31%)
Query: 183 PPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIF 242
P+I + I G +++ + G + T IF
Sbjct: 2 KPKILTASRKIKIKAGFTHNLEVDFIGAPDPTATWTVGDSGAALAPELLVDAKSSTTSIF 61
Query: 243 IKEIRKEDAGDYTVNLSNSSGSVSGTFTINI 273
++ D+G+Y + + N G F + +
Sbjct: 62 FPSAKRADSGNYKLKVKNELGEDEAIFEVIV 92
Score = 77.0 bits (190), Expect = 6e-17
Identities = 14/91 (15%), Positives = 29/91 (31%)
Query: 1790 PPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIF 1849
P+I + I G +++ + G + T IF
Sbjct: 2 KPKILTASRKIKIKAGFTHNLEVDFIGAPDPTATWTVGDSGAALAPELLVDAKSSTTSIF 61
Query: 1850 IKEIRKEDAGDYTVNLSNSSGSVSGTFTINI 1880
++ D+G+Y + + N G F + +
Sbjct: 62 FPSAKRADSGNYKLKVKNELGEDEAIFEVIV 92
Score = 75.4 bits (186), Expect = 2e-16
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Query: 1426 LSGVRDITVKAGEDFSIHVPFMAFPQPAAFWFANDSIIDDSDTRVHKQLTMNSASLVVKN 1485
L+ R I +KAG ++ V F+ P P A W DS + + ++ S+ +
Sbjct: 6 LTASRKIKIKAGFTHNLEVDFIGAPDPTATWTVGDSGAALAP-ELLVDAKSSTTSIFFPS 64
Query: 1486 SQRSDGGQYRLQLKNPAGFDTATLH 1510
++R+D G Y+L++KN G D A
Sbjct: 65 AKRADSGNYKLKVKNELGEDEAIFE 89
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics,
parasitology, structural genomics consortium, SGC,
ATP-binding, nucleotide-binding; HET: ANP; 2.55A
{Toxoplasma gondii}
Length = 285
Score = 99.2 bits (248), Expect = 1e-22
Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 1/91 (1%)
Query: 808 PQPVDIKTSSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLE-KELIRK 866
+ ++ D + ++G+GAFG VH ER +G K I + E I
Sbjct: 10 GRENLYFQGTIDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEA 69
Query: 867 EIDIMNQLHHPKLINLHDAFEDDDEMVLIFE 897
EI+++ L HP +I + + FED M ++ E
Sbjct: 70 EIEVLKSLDHPNIIKIFEVFEDYHNMYIVME 100
>2cr6_A KIAA1556 protein, obscurin; IG-fold, immunoglobulin domain,
structural genomics, NPPSFA; NMR {Homo sapiens}
Length = 115
Score = 93.6 bits (233), Expect = 2e-22
Identities = 20/101 (19%), Positives = 37/101 (36%), Gaps = 5/101 (4%)
Query: 85 FVGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETA-G 143
V G + I L+D+ V G T +C + W + + + ++ G
Sbjct: 8 LVQGRRVHIIEDLEDVDVQEGSSATFRCRISPANYEPVHWFLDKTPLHANELNEIDAQPG 67
Query: 144 GVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPP 184
G L ++ D+G EA G S+ +++ P
Sbjct: 68 GYHVLTLRQLALKDSGTIYFEA----GDQRASAALRVTEKP 104
Score = 93.6 bits (233), Expect = 2e-22
Identities = 20/101 (19%), Positives = 37/101 (36%), Gaps = 5/101 (4%)
Query: 1692 FVGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETA-G 1750
V G + I L+D+ V G T +C + W + + + ++ G
Sbjct: 8 LVQGRRVHIIEDLEDVDVQEGSSATFRCRISPANYEPVHWFLDKTPLHANELNEIDAQPG 67
Query: 1751 GVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPP 1791
G L ++ D+G EA G S+ +++ P
Sbjct: 68 GYHVLTLRQLALKDSGTIYFEA----GDQRASAALRVTEKP 104
Score = 93.6 bits (233), Expect = 2e-22
Identities = 22/112 (19%), Positives = 41/112 (36%), Gaps = 11/112 (9%)
Query: 464 SSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITP 523
S +S VQ + II L + + + +A F+C I+ + W +
Sbjct: 3 SGSSGLVQ------GRRVHIIEDLEDVDVQEGSSATFRCRISPANYEPVHWFLDKTPLHA 56
Query: 524 SARHHIFAE-GDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAP 574
+ + I A+ G + L + + D+ A G + A L + P
Sbjct: 57 NELNEIDAQPGGYHVLTLRQLALKDSGTIYFEA----GDQRASAALRVTEKP 104
Score = 93.6 bits (233), Expect = 2e-22
Identities = 22/112 (19%), Positives = 41/112 (36%), Gaps = 11/112 (9%)
Query: 2071 SSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITP 2130
S +S VQ + II L + + + +A F+C I+ + W +
Sbjct: 3 SGSSGLVQ------GRRVHIIEDLEDVDVQEGSSATFRCRISPANYEPVHWFLDKTPLHA 56
Query: 2131 SARHHIFAE-GDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAP 2181
+ + I A+ G + L + + D+ A G + A L + P
Sbjct: 57 NELNEIDAQPGGYHVLTLRQLALKDSGTIYFEA----GDQRASAALRVTEKP 104
Score = 62.4 bits (152), Expect = 2e-11
Identities = 19/99 (19%), Positives = 29/99 (29%), Gaps = 6/99 (6%)
Query: 1134 APKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQTI 1193
I DL D+ V G T S W ++ + + + +
Sbjct: 13 RVHIIEDL--EDVDVQEGSSATFRCRISPANYEPVHWFLDKTPLHANELNEIDAQPGGYH 70
Query: 1194 YRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYVVDKPS 1232
DSG+ G AS + V +KPS
Sbjct: 71 VLTLRQLALKDSGTIYF----EAGDQRASAALRVTEKPS 105
Score = 55.1 bits (133), Expect = 5e-09
Identities = 10/93 (10%), Positives = 30/93 (32%), Gaps = 5/93 (5%)
Query: 563 STKAELIIM-TAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGG 621
S+ + ++ D + G + + + + W+ D + +
Sbjct: 2 SSGSSGLVQGRRVHIIEDLE--DVDVQE-GSSATFRCRISPANYEPVHWFLDKTPLHANE 58
Query: 622 HFHVETSE-RHAILTIRDASNVDTAPYRVVAEN 653
++ + +LT+R + D+ A +
Sbjct: 59 LNEIDAQPGGYHVLTLRQLALKDSGTIYFEAGD 91
Score = 50.1 bits (120), Expect = 3e-07
Identities = 12/108 (11%), Positives = 37/108 (34%), Gaps = 6/108 (5%)
Query: 172 AHTSSRVKI-GTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRF 230
+ S + G I + + EG + + + V + + +++
Sbjct: 1 GSSGSSGLVQGRRVHIIEDLEDVDVQEGSSATFRCRISPANYEPVHWFLDKTPLHANELN 60
Query: 231 KFTVLDD-YIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLP 277
+ Y ++ ++++ +D+G +G + + +T P
Sbjct: 61 EIDAQPGGYHVLTLRQLALKDSGTIYF----EAGDQRASAALRVTEKP 104
Score = 50.1 bits (120), Expect = 3e-07
Identities = 12/108 (11%), Positives = 37/108 (34%), Gaps = 6/108 (5%)
Query: 1779 AHTSSRVKI-GTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRF 1837
+ S + G I + + EG + + + V + + +++
Sbjct: 1 GSSGSSGLVQGRRVHIIEDLEDVDVQEGSSATFRCRISPANYEPVHWFLDKTPLHANELN 60
Query: 1838 KFTVLDD-YIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLP 1884
+ Y ++ ++++ +D+G +G + + +T P
Sbjct: 61 EIDAQPGGYHVLTLRQLALKDSGTIYF----EAGDQRASAALRVTEKP 104
Score = 41.6 bits (98), Expect = 3e-04
Identities = 12/88 (13%), Positives = 26/88 (29%), Gaps = 3/88 (3%)
Query: 1407 GKQSGPVIVEEQPNKPVMDLSGVRDITVKAGEDFSIHVPFMAFPQPAAFWFANDSIIDDS 1466
G +V+ + + DL D+ V+ G + WF + + + +
Sbjct: 1 GSSGSSGLVQGRRVHIIEDL---EDVDVQEGSSATFRCRISPANYEPVHWFLDKTPLHAN 57
Query: 1467 DTRVHKQLTMNSASLVVKNSQRSDGGQY 1494
+ L ++ D G
Sbjct: 58 ELNEIDAQPGGYHVLTLRQLALKDSGTI 85
>2ic2_A CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin type III, protein
binding; HET: MSE; 1.30A {Drosophila melanogaster} SCOP:
b.1.2.1
Length = 115
Score = 92.7 bits (230), Expect = 3e-22
Identities = 25/108 (23%), Positives = 38/108 (35%), Gaps = 15/108 (13%)
Query: 670 PDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSS-WIRVGNT------ 722
PP P V + +S+ L W P + G I + V+ R W +
Sbjct: 3 TYPPTPPNVTRLSDESVMLRWMVP-RNDGLPIVIFKVQYRMVGKRKNWQTTNDNIPYGKP 61
Query: 723 -------RFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTK 763
+ T ++T L P H Y FR+ A + S TS +
Sbjct: 62 KWNSELGKSFTASVTDLKPQHTYRFRILAVYSNNDNKESNTSAKFYLQ 109
Score = 86.1 bits (213), Expect = 8e-20
Identities = 27/113 (23%), Positives = 41/113 (36%), Gaps = 14/113 (12%)
Query: 378 PSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVG-SDAWQRVNVAI----- 431
PP P VT++ + V L W P + G I + + VG WQ N I
Sbjct: 3 TYPPTPPNVTRLSDESVMLRWMVP-RNDGLPIVIFKVQYRMVGKRKNWQTTNDNIPYGKP 61
Query: 432 ------CAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAA 478
++ +L Y FR+ A + S+ S ++ P AA
Sbjct: 62 KWNSELGKSFTASVTDLKPQHTYRFRILAVYSNNDNKESNTSAKFYLQ-PGAA 113
Score = 86.1 bits (213), Expect = 8e-20
Identities = 27/113 (23%), Positives = 41/113 (36%), Gaps = 14/113 (12%)
Query: 1985 PSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVG-SDAWQRVNVAI----- 2038
PP P VT++ + V L W P + G I + + VG WQ N I
Sbjct: 3 TYPPTPPNVTRLSDESVMLRWMVP-RNDGLPIVIFKVQYRMVGKRKNWQTTNDNIPYGKP 61
Query: 2039 ------CAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAA 2085
++ +L Y FR+ A + S+ S ++ P AA
Sbjct: 62 KWNSELGKSFTASVTDLKPQHTYRFRILAVYSNNDNKESNTSAKFYLQ-PGAA 113
Score = 83.8 bits (207), Expect = 5e-19
Identities = 25/125 (20%), Positives = 40/125 (32%), Gaps = 23/125 (18%)
Query: 1001 VPGAPGAPKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDK-WIKASMAHIPDT 1059
P P +++S+ L W PR + G PI + V+ R++ K W +
Sbjct: 2 STYPPTPPNVTRLSDESVMLRWMVPR-NDGLPIVIFKVQYRMVGKRKNWQTTNDNIPYGK 60
Query: 1060 SLKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPW 1119
+ VT L H Y FR+ AV +
Sbjct: 61 PKWNSELGKSFTA---------------------SVTDLKPQHTYRFRILAVYSNNDNKE 99
Query: 1120 SSSSD 1124
S++S
Sbjct: 100 SNTSA 104
Score = 82.7 bits (204), Expect = 1e-18
Identities = 23/99 (23%), Positives = 35/99 (35%), Gaps = 15/99 (15%)
Query: 1231 PSPPQGPLDVSDITPESCSLSWKPPLDDGGSPITNYVVEKYESA-------------TGF 1277
PP P +V+ ++ ES L W P + G PI + V+ G
Sbjct: 3 TYPP-TPPNVTRLSDESVMLRWMVP-RNDGLPIVIFKVQYRMVGKRKNWQTTNDNIPYGK 60
Query: 1278 WSKLSSFVRSPAYDVFGLETNRQYRFRVRAENQYGVSEP 1316
S +S V L+ YRFR+ A ++
Sbjct: 61 PKWNSELGKSFTASVTDLKPQHTYRFRILAVYSNNDNKE 99
Score = 81.1 bits (200), Expect = 5e-18
Identities = 22/101 (21%), Positives = 35/101 (34%), Gaps = 15/101 (14%)
Query: 275 GLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERR-------------DISM 321
G PP P +V+ ++ + L W P+ + GL + + V+ R +I
Sbjct: 1 GSTYPP-TPPNVTRLSDESVMLRWMVPR-NDGLPIVIFKVQYRMVGKRKNWQTTNDNIPY 58
Query: 322 PHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPP 362
S T V L Y F ++AV N
Sbjct: 59 GKPKWNSELGKSFTASVTDLKPQHTYRFRILAVYSNNDNKE 99
Score = 81.1 bits (200), Expect = 5e-18
Identities = 22/101 (21%), Positives = 35/101 (34%), Gaps = 15/101 (14%)
Query: 1882 GLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERR-------------DISM 1928
G PP P +V+ ++ + L W P+ + GL + + V+ R +I
Sbjct: 1 GSTYPP-TPPNVTRLSDESVMLRWMVPR-NDGLPIVIFKVQYRMVGKRKNWQTTNDNIPY 58
Query: 1929 PHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPP 1969
S T V L Y F ++AV N
Sbjct: 59 GKPKWNSELGKSFTASVTDLKPQHTYRFRILAVYSNNDNKE 99
Score = 73.8 bits (181), Expect = 2e-15
Identities = 20/108 (18%), Positives = 38/108 (35%), Gaps = 14/108 (12%)
Query: 902 PHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYN-STVWTKVSSYVTTPFV 960
+PP + + +S+ L W PR+ G I + V+ + W + +
Sbjct: 3 TYPPTPPNVTRLSDESVMLRWMVPRN-DGLPIVIFKVQYRMVGKRKNWQTTNDNIPYGKP 61
Query: 961 R------------VRNLAIGSTYEFRVMAENQYGLSKPALTIDPIKAK 996
+ V +L TY FR++A +K + T +
Sbjct: 62 KWNSELGKSFTASVTDLKPQHTYRFRILAVYSNNDNKESNTSAKFYLQ 109
Score = 72.6 bits (178), Expect = 3e-15
Identities = 24/132 (18%), Positives = 43/132 (32%), Gaps = 36/132 (27%)
Query: 1559 VDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDK-WIKASMAHIPDTSLKYVLWVSE 1617
+++S+ L W PR + G PI + V+ R++ K W +
Sbjct: 12 TRLSDESVMLRWMVPR-NDGLPIVIFKVQYRMVGKRKNWQTTNDNIPYGKP--------- 61
Query: 1618 GKSIGSERGSTAQFLEREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGK 1677
K N + SV +L + Y FRI+AV +
Sbjct: 62 -------------------------KWNSELGKSFTASVTDLKPQHTYRFRILAVYSNND 96
Query: 1678 SEPSICTTPVKI 1689
++ S + +
Sbjct: 97 NKESNTSAKFYL 108
Score = 58.4 bits (141), Expect = 4e-10
Identities = 16/74 (21%), Positives = 28/74 (37%), Gaps = 12/74 (16%)
Query: 21 CYIIERREVG-GAIWLKCND-----------YNVLECSFSVLNLVEGNDYEFRIIAVNAI 68
+ ++ R VG W ND + SV +L + Y FRI+AV +
Sbjct: 35 IFKVQYRMVGKRKNWQTTNDNIPYGKPKWNSELGKSFTASVTDLKPQHTYRFRILAVYSN 94
Query: 69 GKSEPSICTTPVKI 82
++ S + +
Sbjct: 95 NDNKESNTSAKFYL 108
Score = 47.2 bits (112), Expect = 4e-06
Identities = 15/83 (18%), Positives = 29/83 (34%), Gaps = 5/83 (6%)
Query: 1331 VPDPPGQPQIVDWDTNNATLMWDRPRTDGGSKIQGY----KMLLKTPTGELPTTIWSKIR 1386
PP P + + L W PR + G I + +M+ K + +
Sbjct: 2 STYPPTPPNVTRLSDESVMLRWMVPR-NDGLPIVIFKVQYRMVGKRKNWQTTNDNIPYGK 60
Query: 1387 PTSSTVYCKDTTMNSSNSEPGKQ 1409
P ++ K T + ++ +P
Sbjct: 61 PKWNSELGKSFTASVTDLKPQHT 83
>1x4x_A Fibronectin type-III domain containing protein 3A; FN3,
immunoglobulin-like beta- sandwich fold, KIAA0970,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
b.1.2.1
Length = 106
Score = 92.4 bits (230), Expect = 4e-22
Identities = 24/93 (25%), Positives = 34/93 (36%), Gaps = 2/93 (2%)
Query: 670 PDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSWIRVGNTRFTTMAI 729
PD + P V + W P+ G+++T Y +E S + I
Sbjct: 8 PDQCKPPQVTCRSATCAQVNWEVPL-SNGTDVTEYRLEWGGVE-GSMQICYCGPGLSYEI 65
Query: 730 TGLSPGHQYEFRVYAENVYGRSDPSTTSDLITT 762
GLSP Y RV A +V G S +T
Sbjct: 66 KGLSPATTYYCRVQALSVVGAGPFSEVVACVTP 98
Score = 85.8 bits (213), Expect = 6e-20
Identities = 22/102 (21%), Positives = 40/102 (39%), Gaps = 6/102 (5%)
Query: 1231 PSPPQGPLDVSDITPESCSLSWKPPLDDGGSPITNYVVEKYESATGFWSKLSSFVRSPAY 1290
P + P V+ + ++W+ P G+ +T Y +E + G +Y
Sbjct: 8 PDQCKPP-QVTCRSATCAQVNWEVP-LSNGTDVTEYRLE-WGGVEGSMQICYC-GPGLSY 63
Query: 1291 DVFGLETNRQYRFRVRAENQYGVSEPLELDNSITAKFPFTVP 1332
++ GL Y RV+A + G E+ +T P + P
Sbjct: 64 EIKGLSPATTYYCRVQALSVVGAGPFSEVVACVTP--PSSGP 103
Score = 83.5 bits (207), Expect = 4e-19
Identities = 20/133 (15%), Positives = 33/133 (24%), Gaps = 37/133 (27%)
Query: 1001 VPGAPGAPKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTS 1060
P P+ + + W P G+ + Y +E + I P S
Sbjct: 7 GPDQCKPPQVTCRSATCAQVNWEVPL-SNGTDVTEYRLEWGGVEGSMQI---CYCGPGLS 62
Query: 1061 LKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPWS 1120
+ L Y RV A++ G GP+S
Sbjct: 63 Y--------------------------------EIKGLSPATTYYCRVQALSVVGAGPFS 90
Query: 1121 SSSDII-MCCAPP 1132
+ + P
Sbjct: 91 EVVACVTPPSSGP 103
Score = 81.6 bits (202), Expect = 2e-18
Identities = 24/109 (22%), Positives = 40/109 (36%), Gaps = 9/109 (8%)
Query: 274 TGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHD 333
+ P P V+ + ++W P G VT Y +E + IC
Sbjct: 5 SSGPDQC-KPPQVTCRSATCAQVNWEVP-LSNGTDVTEYRLEWGGVEGSMQICYCGP--G 60
Query: 334 TTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPG 382
++ ++GL+ Y V A++ G GP E + + S S P
Sbjct: 61 LSYEIKGLSPATTYYCRVQALSVVGAGPFSEVVACVTPPS-----SGPS 104
Score = 81.6 bits (202), Expect = 2e-18
Identities = 24/109 (22%), Positives = 40/109 (36%), Gaps = 9/109 (8%)
Query: 1881 TGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHD 1940
+ P P V+ + ++W P G VT Y +E + IC
Sbjct: 5 SSGPDQC-KPPQVTCRSATCAQVNWEVP-LSNGTDVTEYRLEWGGVEGSMQICYCGP--G 60
Query: 1941 TTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPG 1989
++ ++GL+ Y V A++ G GP E + + S S P
Sbjct: 61 LSYEIKGLSPATTYYCRVQALSVVGAGPFSEVVACVTPPS-----SGPS 104
Score = 79.3 bits (196), Expect = 1e-17
Identities = 17/103 (16%), Positives = 36/103 (34%), Gaps = 5/103 (4%)
Query: 902 PHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTKVSSYVTTPFVR 961
P + + + W P NG +++T Y +E ++ +
Sbjct: 8 PDQCKPPQVTCRSATCAQVNWEVPLSNG-TDVTEYRLEWGGVEGSMQICYCGPGLS--YE 64
Query: 962 VRNLAIGSTYEFRVMAENQYGLSKPALTIDPIKAKHPFDVPGA 1004
++ L+ +TY RV A + G + + + P P +
Sbjct: 65 IKGLSPATTYYCRVQALSVVGAGPFSEVVACVTP--PSSGPSS 105
Score = 74.3 bits (183), Expect = 8e-16
Identities = 18/93 (19%), Positives = 26/93 (27%), Gaps = 4/93 (4%)
Query: 378 PSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQI 437
P P VT ++W+ P G+ + Y ++ V
Sbjct: 8 PDQCKPPQVTCRSATCAQVNWEVP-LSNGTDVTEYRLEWGGVEGSMQICYCGPG---LSY 63
Query: 438 NIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSV 470
I L Y RV A + G S V
Sbjct: 64 EIKGLSPATTYYCRVQALSVVGAGPFSEVVACV 96
Score = 74.3 bits (183), Expect = 8e-16
Identities = 18/93 (19%), Positives = 26/93 (27%), Gaps = 4/93 (4%)
Query: 1985 PSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQI 2044
P P VT ++W+ P G+ + Y ++ V
Sbjct: 8 PDQCKPPQVTCRSATCAQVNWEVP-LSNGTDVTEYRLEWGGVEGSMQICYCGPG---LSY 63
Query: 2045 NIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSV 2077
I L Y RV A + G S V
Sbjct: 64 EIKGLSPATTYYCRVQALSVVGAGPFSEVVACV 96
Score = 56.2 bits (136), Expect = 2e-09
Identities = 17/131 (12%), Positives = 29/131 (22%), Gaps = 52/131 (39%)
Query: 1559 VDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEG 1618
+ + W P G+ + Y +E + I P S
Sbjct: 17 TCRSATCAQVNWEVPL-SNGTDVTEYRLEWGGVEGSMQI---CYCGPGLS---------- 62
Query: 1619 KSIGSERGSTAQFLEREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKS 1678
+ + L Y R+ A++ +G
Sbjct: 63 -----------------------------------YEIKGLSPATTYYCRVQALSVVGAG 87
Query: 1679 EPS---ICTTP 1686
S C TP
Sbjct: 88 PFSEVVACVTP 98
Score = 52.3 bits (126), Expect = 4e-08
Identities = 15/61 (24%), Positives = 25/61 (40%), Gaps = 6/61 (9%)
Query: 22 YIIERREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPS---ICTT 78
Y +E V G++ + Y S+ + L Y R+ A++ +G S C T
Sbjct: 41 YRLEWGGVEGSMQI---CYCGPGLSYEIKGLSPATTYYCRVQALSVVGAGPFSEVVACVT 97
Query: 79 P 79
P
Sbjct: 98 P 98
Score = 44.2 bits (105), Expect = 3e-05
Identities = 11/64 (17%), Positives = 19/64 (29%), Gaps = 6/64 (9%)
Query: 1330 TVPDPPGQPQIVDWDTNNATLMWDRPRTDGGSKIQGYKMLLKTPTGELPTTIWSKIRPTS 1389
+ PD PQ+ A + W+ P G+ + Y++ G
Sbjct: 6 SGPDQCKPPQVTCRSATCAQVNWEVP-LSNGTDVTEYRLEWGGVEGS-----MQICYCGP 59
Query: 1390 STVY 1393
Y
Sbjct: 60 GLSY 63
>3caf_A Fibroblast growth factor receptor 2; FGFR2, D2, ATP-binding,
disease MU ectodermal dysplasia, glycoprotein,
heparin-binding, immuno domain, kinase; 1.96A {Homo
sapiens} PDB: 3cu1_A* 3euu_A 3dar_A 1wvz_A
Length = 100
Score = 92.1 bits (229), Expect = 4e-22
Identities = 25/97 (25%), Positives = 38/97 (39%), Gaps = 5/97 (5%)
Query: 89 EKPDFIVPLK----DLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARY-RVETAG 143
P + K VP + +C A G P+P RWL+NG+E R +
Sbjct: 3 RAPYWTNTEKMEKRLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRN 62
Query: 144 GVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKI 180
+ L V D G+YTC N G + + + +
Sbjct: 63 QHWSLIMESVVPSDKGNYTCVVENEYGSINHTYHLDV 99
Score = 92.1 bits (229), Expect = 4e-22
Identities = 25/97 (25%), Positives = 38/97 (39%), Gaps = 5/97 (5%)
Query: 1696 EKPDFIVPLK----DLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARY-RVETAG 1750
P + K VP + +C A G P+P RWL+NG+E R +
Sbjct: 3 RAPYWTNTEKMEKRLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRN 62
Query: 1751 GVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKI 1787
+ L V D G+YTC N G + + + +
Sbjct: 63 QHWSLIMESVVPSDKGNYTCVVENEYGSINHTYHLDV 99
Score = 82.9 bits (205), Expect = 7e-19
Identities = 23/99 (23%), Positives = 39/99 (39%), Gaps = 5/99 (5%)
Query: 478 AKAPEIIVPLRNANAIQN----HNAQFQCTITGCPKPTISWLKGSREITPSARHHIF-AE 532
+AP + + + +F+C G P PT+ WLK +E R +
Sbjct: 2 KRAPYWTNTEKMEKRLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVR 61
Query: 533 GDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIM 571
++LI+ SV D Y C N+ G + L ++
Sbjct: 62 NQHWSLIMESVVPSDKGNYTCVVENEYGSINHTYHLDVV 100
Score = 82.9 bits (205), Expect = 7e-19
Identities = 23/99 (23%), Positives = 39/99 (39%), Gaps = 5/99 (5%)
Query: 2085 AKAPEIIVPLRNANAIQN----HNAQFQCTITGCPKPTISWLKGSREITPSARHHIF-AE 2139
+AP + + + +F+C G P PT+ WLK +E R +
Sbjct: 2 KRAPYWTNTEKMEKRLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVR 61
Query: 2140 GDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIM 2178
++LI+ SV D Y C N+ G + L ++
Sbjct: 62 NQHWSLIMESVVPSDKGNYTCVVENEYGSINHTYHLDVV 100
Score = 64.8 bits (158), Expect = 1e-12
Identities = 16/97 (16%), Positives = 32/97 (32%), Gaps = 2/97 (2%)
Query: 572 TAPKFNVPPRFRDTAYF-DKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFH-VETSE 629
AP + + + V + P G P P + W ++ + + +
Sbjct: 3 RAPYWTNTEKMEKRLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRN 62
Query: 630 RHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQI 666
+H L + D Y V EN+ G + + +
Sbjct: 63 QHWSLIMESVVPSDKGNYTCVVENEYGSINHTYHLDV 99
Score = 60.1 bits (146), Expect = 6e-11
Identities = 28/101 (27%), Positives = 39/101 (38%), Gaps = 10/101 (9%)
Query: 1134 APKITSDLSI--RDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQ 1191
AP T+ + R V A P G P PT W NG E + RI NQ
Sbjct: 4 APYWTNTEKMEKRLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQ 63
Query: 1192 ----TIYRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYVV 1228
+ + +D G+YT + N GS + + + VV
Sbjct: 64 HWSLIM----ESVVPSDKGNYTCVVENEYGSINHTYHLDVV 100
Score = 48.2 bits (115), Expect = 1e-06
Identities = 18/100 (18%), Positives = 29/100 (29%), Gaps = 7/100 (7%)
Query: 1409 QSGPVIVEEQPNKPVMDLSGVRDITVKAGEDFSIHVPFMAFPQPAAFWFANDSIIDDSDT 1468
+ P + + R V A P P P W N
Sbjct: 2 KRAPYWTNTEKMEK-------RLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHR 54
Query: 1469 RVHKQLTMNSASLVVKNSQRSDGGQYRLQLKNPAGFDTAT 1508
++ SL++++ SD G Y ++N G T
Sbjct: 55 IGGYKVRNQHWSLIMESVVPSDKGNYTCVVENEYGSINHT 94
Score = 45.1 bits (107), Expect = 1e-05
Identities = 13/56 (23%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 219 KNGRVVQSDDRFK-FTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINI 273
KNG+ + + R + V + + + ++ + D G+YT + N GS++ T+ +++
Sbjct: 44 KNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYTCVVENEYGSINHTYHLDV 99
Score = 45.1 bits (107), Expect = 1e-05
Identities = 13/56 (23%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 1826 KNGRVVQSDDRFK-FTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINI 1880
KNG+ + + R + V + + + ++ + D G+YT + N GS++ T+ +++
Sbjct: 44 KNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYTCVVENEYGSINHTYHLDV 99
>2dmk_A Midline 2 isoform 2; midline defect 2, tripartite motif protein 1,
midin-2, ring finger protein 60, structural genomics,
NPPSFA; NMR {Homo sapiens}
Length = 127
Score = 93.1 bits (231), Expect = 4e-22
Identities = 23/125 (18%), Positives = 46/125 (36%), Gaps = 14/125 (11%)
Query: 1218 SDSASCKVYVVDKPSPPQGPLDVSDITPESCSLSWKPPLDDGGSPITNYVVE--KYESAT 1275
S S+ + + P+PP ++ + ++ ++ W I++Y ++ +
Sbjct: 3 SGSSGEGLDYLTAPNPPSIREELCTASHDTITVHWISD---DEFSISSYELQYTIFTGQA 59
Query: 1276 GF--------WSKLSSFVRSPAYDVFGLETNRQYRFRVRAENQYGVSEPLELDNSITAKF 1327
F + ++ Y V GL++ +Y F V+A NQ G T
Sbjct: 60 NFISLYNSVDSWMIVPNIKQNHYTVHGLQSGTRYIFIVKAINQAGSRNSEPTRLK-TNSQ 118
Query: 1328 PFTVP 1332
PF
Sbjct: 119 PFKSG 123
Score = 86.9 bits (215), Expect = 5e-20
Identities = 22/118 (18%), Positives = 43/118 (36%), Gaps = 15/118 (12%)
Query: 658 DSAIVKIQISDRPDPPQF-PTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSS- 715
S+ + P+PP + HD++ + W + +I++Y ++ +
Sbjct: 4 GSSGEGLDYLTAPNPPSIREELCTASHDTITVHWISD---DEFSISSYELQYTIFTGQAN 60
Query: 716 ----------WIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTK 763
W+ V N + + GL G +Y F V A N G + T ++
Sbjct: 61 FISLYNSVDSWMIVPNIKQNHYTVHGLQSGTRYIFIVKAINQAGSRNSEPTRLKTNSQ 118
Score = 86.9 bits (215), Expect = 5e-20
Identities = 25/129 (19%), Positives = 42/129 (32%), Gaps = 15/129 (11%)
Query: 261 SSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDIS 320
SSGS ++ P PP ++ + T T+HW ++ Y ++ +
Sbjct: 2 SSGSSGEG--LDYLTAPNPPSIREELCTASHDTITVHWISD---DEFSISSYELQYTIFT 56
Query: 321 MP----------HWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIK 370
I + V GL G Y+F V A+N+ G
Sbjct: 57 GQANFISLYNSVDSWMIVPNIKQNHYTVHGLQSGTRYIFIVKAINQAGSRNSEPTRLKTN 116
Query: 371 AKSPYDKPS 379
++ PS
Sbjct: 117 SQPFKSGPS 125
Score = 86.9 bits (215), Expect = 5e-20
Identities = 25/129 (19%), Positives = 42/129 (32%), Gaps = 15/129 (11%)
Query: 1868 SSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDIS 1927
SSGS ++ P PP ++ + T T+HW ++ Y ++ +
Sbjct: 2 SSGSSGEG--LDYLTAPNPPSIREELCTASHDTITVHWISD---DEFSISSYELQYTIFT 56
Query: 1928 MP----------HWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIK 1977
I + V GL G Y+F V A+N+ G
Sbjct: 57 GQANFISLYNSVDSWMIVPNIKQNHYTVHGLQSGTRYIFIVKAINQAGSRNSEPTRLKTN 116
Query: 1978 AKSPYDKPS 1986
++ PS
Sbjct: 117 SQPFKSGPS 125
Score = 75.0 bits (184), Expect = 8e-16
Identities = 25/123 (20%), Positives = 43/123 (34%), Gaps = 17/123 (13%)
Query: 896 FEVLDRPHPPE-NLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNST-------- 946
+ L P+PP + D++T++W I++Y ++ +
Sbjct: 10 LDYLTAPNPPSIREELCTASHDTITVHWISD---DEFSISSYELQYTIFTGQANFISLYN 66
Query: 947 ---VWTKVSSYVTTPFVRVRNLAIGSTYEFRVMAENQYGLSKPALTIDPIKAKHPFDVPG 1003
W V + + V L G+ Y F V A NQ G T ++ PF
Sbjct: 67 SVDSWMIVPNIKQNHYT-VHGLQSGTRYIFIVKAINQAGSRNSEPTRLKTNSQ-PFKSGP 124
Query: 1004 APG 1006
+ G
Sbjct: 125 SSG 127
Score = 66.9 bits (163), Expect = 6e-13
Identities = 19/118 (16%), Positives = 30/118 (25%), Gaps = 17/118 (14%)
Query: 370 KAKSPYDKPSPP-GIPVVTQVGGDFVNLSWDKPLDDGGSRIQGY-----------WIDKH 417
+ P+PP + D + + W I Y
Sbjct: 8 EGLDYLTAPNPPSIREELCTASHDTITVHWISD---DEFSISSYELQYTIFTGQANFISL 64
Query: 418 EVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDP 475
D+W V + + L G +Y F V A N+AG +
Sbjct: 65 YNSVDSWMIVPN--IKQNHYTVHGLQSGTRYIFIVKAINQAGSRNSEPTRLKTNSQPF 120
Score = 66.9 bits (163), Expect = 6e-13
Identities = 19/118 (16%), Positives = 30/118 (25%), Gaps = 17/118 (14%)
Query: 1977 KAKSPYDKPSPP-GIPVVTQVGGDFVNLSWDKPLDDGGSRIQGY-----------WIDKH 2024
+ P+PP + D + + W I Y
Sbjct: 8 EGLDYLTAPNPPSIREELCTASHDTITVHWISD---DEFSISSYELQYTIFTGQANFISL 64
Query: 2025 EVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDP 2082
D+W V + + L G +Y F V A N+AG +
Sbjct: 65 YNSVDSWMIVPN--IKQNHYTVHGLQSGTRYIFIVKAINQAGSRNSEPTRLKTNSQPF 120
Score = 65.7 bits (160), Expect = 1e-12
Identities = 19/144 (13%), Positives = 35/144 (24%), Gaps = 27/144 (18%)
Query: 994 KAKHPFDVPGAP-GAPKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKAS 1052
+ P P + ++ D+I++ W I Y ++ + +
Sbjct: 8 EGLDYLTAPNPPSIREELCTASHDTITVHWISD---DEFSISSYELQYTIFTGQANFI-- 62
Query: 1053 MAHIPDTSLKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVN 1112
L+ S + + V L Y F V A+N
Sbjct: 63 -----------SLYNSVDSWMIVPNIKQNHY----------TVHGLQSGTRYIFIVKAIN 101
Query: 1113 AAGQGPWSSSSDIIMCCAPPCAPK 1136
AG + P
Sbjct: 102 QAGSRNSEPTRLKTNSQPFKSGPS 125
Score = 62.6 bits (152), Expect = 1e-11
Identities = 18/134 (13%), Positives = 33/134 (24%), Gaps = 39/134 (29%)
Query: 1559 VDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEG 1618
++ D+I++ W I Y ++
Sbjct: 26 CTASHDTITVHWISD---DEFSISSYELQYT----------------------------- 53
Query: 1619 KSIGSERGSTAQFLEREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKS 1678
A F+ W+ N+ + ++V L G Y F + A+N G
Sbjct: 54 -----IFTGQANFISLYNSVDSWMIVP--NIKQNHYTVHGLQSGTRYIFIVKAINQAGSR 106
Query: 1679 EPSICTTPVKICEF 1692
F
Sbjct: 107 NSEPTRLKTNSQPF 120
Score = 53.8 bits (129), Expect = 2e-08
Identities = 12/75 (16%), Positives = 20/75 (26%), Gaps = 9/75 (12%)
Query: 20 DCYIIERREVGGAIWLKCND---------YNVLECSFSVLNLVEGNDYEFRIIAVNAIGK 70
Y ++ G N+ + ++V L G Y F + A+N G
Sbjct: 46 SSYELQYTIFTGQANFISLYNSVDSWMIVPNIKQNHYTVHGLQSGTRYIFIVKAINQAGS 105
Query: 71 SEPSICTTPVKICEF 85
F
Sbjct: 106 RNSEPTRLKTNSQPF 120
Score = 37.6 bits (87), Expect = 0.010
Identities = 13/84 (15%), Positives = 30/84 (35%), Gaps = 5/84 (5%)
Query: 1328 PFTVPDPP-GQPQIVDWDTNNATLMWDRPRTDGGSKIQGYKMLLKTPTGELP-TTIWSKI 1385
T P+PP + ++ + T+ W +D I Y++ TG+ ++++ +
Sbjct: 12 YLTAPNPPSIREELCTASHDTITVHW---ISDDEFSISSYELQYTIFTGQANFISLYNSV 68
Query: 1386 RPTSSTVYCKDTTMNSSNSEPGKQ 1409
K + G +
Sbjct: 69 DSWMIVPNIKQNHYTVHGLQSGTR 92
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein
kinase, transferase, calcium-bindin binding, EF hand,
bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma
gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A*
3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A*
3v5t_A* 3ku2_A* 3hx4_A*
Length = 484
Score = 101 bits (253), Expect = 5e-22
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 3/90 (3%)
Query: 811 VDIKTSSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIP---VSHNLEKELIRKE 867
V T+ D Y +G G+FG V C+++ TG A K I V +KE + +E
Sbjct: 17 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLRE 76
Query: 868 IDIMNQLHHPKLINLHDAFEDDDEMVLIFE 897
+ ++ QL HP ++ L++ FED L+ E
Sbjct: 77 VQLLKQLDHPNIMKLYEFFEDKGYFYLVGE 106
>2dku_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens}
Length = 103
Score = 91.6 bits (228), Expect = 5e-22
Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 5/94 (5%)
Query: 477 AAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTY 536
++ A L N + A F C P T++W KG E+ S +H EG T
Sbjct: 5 SSGANCFTEELTNLQVEEKGTAVFTCKTEH-PAATVTWRKGLLELRASGKHQPSQEGLTL 63
Query: 537 TLIINSVYGVDADEYVCRAVNKGGVKSTKAELII 570
L I+++ D+D Y C G ++A+L++
Sbjct: 64 RLTISALEKADSDTYTCDI----GQAQSRAQLLV 93
Score = 91.6 bits (228), Expect = 5e-22
Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 5/94 (5%)
Query: 2084 AAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTY 2143
++ A L N + A F C P T++W KG E+ S +H EG T
Sbjct: 5 SSGANCFTEELTNLQVEEKGTAVFTCKTEH-PAATVTWRKGLLELRASGKHQPSQEGLTL 63
Query: 2144 TLIINSVYGVDADEYVCRAVNKGGVKSTKAELII 2177
L I+++ D+D Y C G ++A+L++
Sbjct: 64 RLTISALEKADSDTYTCDI----GQAQSRAQLLV 93
Score = 82.8 bits (205), Expect = 7e-19
Identities = 18/94 (19%), Positives = 35/94 (37%), Gaps = 5/94 (5%)
Query: 91 PDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHF 150
F L +L V C+ T P W + E+ + +++ G RL
Sbjct: 9 NCFTEELTNLQVEEKGTAVFTCK-TEHPAATVTWRKGLLELRASGKHQPSQEGLTLRLTI 67
Query: 151 NEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPP 184
+ + D+ YTC+ G A + +++ +
Sbjct: 68 SALEKADSDTYTCDI----GQAQSRAQLLVQGRR 97
Score = 82.8 bits (205), Expect = 7e-19
Identities = 18/94 (19%), Positives = 35/94 (37%), Gaps = 5/94 (5%)
Query: 1698 PDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHF 1757
F L +L V C+ T P W + E+ + +++ G RL
Sbjct: 9 NCFTEELTNLQVEEKGTAVFTCK-TEHPAATVTWRKGLLELRASGKHQPSQEGLTLRLTI 67
Query: 1758 NEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPP 1791
+ + D+ YTC+ G A + +++ +
Sbjct: 68 SALEKADSDTYTCDI----GQAQSRAQLLVQGRR 97
Score = 55.4 bits (134), Expect = 3e-09
Identities = 18/105 (17%), Positives = 29/105 (27%), Gaps = 14/105 (13%)
Query: 573 APKFNVPPRFRDTAYFDKGENVVVKIPFT---GYPKPKITWYRDNEVIESGGHFHVETSE 629
A F + ++ V FT +P +TW + + + G
Sbjct: 8 ANCFTEELT--NL-QVEEKGTAV----FTCKTEHPAATVTWRKGLLELRASGKHQPSQEG 60
Query: 630 RHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQISDRPDPPQ 674
LTI D+ Y A + +Q R P
Sbjct: 61 LTLRLTISALEKADSDTYTCDIGQAQS--RAQLLVQ--GRRSGPS 101
Score = 53.5 bits (129), Expect = 2e-08
Identities = 19/104 (18%), Positives = 32/104 (30%), Gaps = 12/104 (11%)
Query: 1134 APKITSDLSIRDMTVLAGE--EFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQ 1191
A T +L ++ V FT P T W E+ G+ +
Sbjct: 8 ANCFTEEL--TNLQVEEKGTAVFTCKT---EHPAATVTWRKGLLELRASGKHQPSQEGLT 62
Query: 1192 TIYRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYVVDKPSPPQ 1235
+ DS +YT +G + ++ V + S P
Sbjct: 63 LRLTISAL-EKADSDTYTC----DIGQAQSRAQLLVQGRRSGPS 101
Score = 46.9 bits (112), Expect = 3e-06
Identities = 12/98 (12%), Positives = 26/98 (26%), Gaps = 5/98 (5%)
Query: 183 PPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIF 242
L + E V+ K +++ + + + + +
Sbjct: 8 ANCFTEELTNLQVEEKGTAVFTCKTEHPAA-TVTWRKGLLELRASGKHQPSQEGLTLRLT 66
Query: 243 IKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPP 280
I + K D+ YT G + + G P
Sbjct: 67 ISALEKADSDTYTC----DIGQAQSRAQLLVQGRRSGP 100
Score = 46.9 bits (112), Expect = 3e-06
Identities = 12/98 (12%), Positives = 26/98 (26%), Gaps = 5/98 (5%)
Query: 1790 PPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIF 1849
L + E V+ K +++ + + + + +
Sbjct: 8 ANCFTEELTNLQVEEKGTAVFTCKTEHPAA-TVTWRKGLLELRASGKHQPSQEGLTLRLT 66
Query: 1850 IKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPP 1887
I + K D+ YT G + + G P
Sbjct: 67 ISALEKADSDTYTC----DIGQAQSRAQLLVQGRRSGP 100
Score = 35.4 bits (82), Expect = 0.035
Identities = 8/67 (11%), Positives = 19/67 (28%), Gaps = 6/67 (8%)
Query: 1430 RDITVKAGED--FSIHVPFMAFPQPAAFWFANDSIIDDSDTRVHKQLTMNSASLVVKNSQ 1487
++ V+ F+ P W + S + + L + +
Sbjct: 16 TNLQVEEKGTAVFTCKT---EHPAATVTWRKGLLELRASG-KHQPSQEGLTLRLTISALE 71
Query: 1488 RSDGGQY 1494
++D Y
Sbjct: 72 KADSDTY 78
>2dlt_A Myosin binding protein C, fast-type; IG-like domain, mybpc2,
structural genomics, NPPSFA; NMR {Mus musculus}
Length = 106
Score = 91.7 bits (228), Expect = 6e-22
Identities = 22/102 (21%), Positives = 38/102 (37%), Gaps = 3/102 (2%)
Query: 474 DPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEG 533
++ E++ + + A F+C ++ K T W K E+ PS R I G
Sbjct: 2 SSGSSGQLEVLQDIADLTVKAAEQAVFKCEVSD-EKVTGKWYKNGVEVRPSKRITISHVG 60
Query: 534 DTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPK 575
+ L+I+ V D +Y S A+L +
Sbjct: 61 RFHKLVIDDVRPEDEGDYTFVPDGYAL--SLSAKLNFLEIKV 100
Score = 91.7 bits (228), Expect = 6e-22
Identities = 22/102 (21%), Positives = 38/102 (37%), Gaps = 3/102 (2%)
Query: 2081 DPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEG 2140
++ E++ + + A F+C ++ K T W K E+ PS R I G
Sbjct: 2 SSGSSGQLEVLQDIADLTVKAAEQAVFKCEVSD-EKVTGKWYKNGVEVRPSKRITISHVG 60
Query: 2141 DTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPK 2182
+ L+I+ V D +Y S A+L +
Sbjct: 61 RFHKLVIDDVRPEDEGDYTFVPDGYAL--SLSAKLNFLEIKV 100
Score = 87.1 bits (216), Expect = 3e-20
Identities = 20/98 (20%), Positives = 37/98 (37%), Gaps = 3/98 (3%)
Query: 90 KPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLH 149
+ + + + DL V + +CE + V +W +NG E+ R + G +L
Sbjct: 8 QLEVLQDIADLTVKAAEQAVFKCEVSDEKVT-GKWYKNGVEVRPSKRITISHVGRFHKLV 66
Query: 150 FNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRID 187
++V D GDYT S+++
Sbjct: 67 IDDVRPEDEGDYTFVPDGYAL--SLSAKLNFLEIKVSG 102
Score = 87.1 bits (216), Expect = 3e-20
Identities = 20/98 (20%), Positives = 37/98 (37%), Gaps = 3/98 (3%)
Query: 1697 KPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLH 1756
+ + + + DL V + +CE + V +W +NG E+ R + G +L
Sbjct: 8 QLEVLQDIADLTVKAAEQAVFKCEVSDEKVT-GKWYKNGVEVRPSKRITISHVGRFHKLV 66
Query: 1757 FNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRID 1794
++V D GDYT S+++
Sbjct: 67 IDDVRPEDEGDYTFVPDGYAL--SLSAKLNFLEIKVSG 102
Score = 60.9 bits (148), Expect = 4e-11
Identities = 16/83 (19%), Positives = 23/83 (27%), Gaps = 1/83 (1%)
Query: 591 GENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAPYRVV 650
E V K + K WY++ + + R L I D D Y V
Sbjct: 23 AEQAVFKCEVSD-EKVTGKWYKNGVEVRPSKRITISHVGRFHKLVIDDVRPEDEGDYTFV 81
Query: 651 AENDLGMDSAIVKIQISDRPDPP 673
+ SA + P
Sbjct: 82 PDGYALSLSAKLNFLEIKVSGPS 104
Score = 58.6 bits (142), Expect = 3e-10
Identities = 27/103 (26%), Positives = 33/103 (32%), Gaps = 4/103 (3%)
Query: 1134 APKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQTI 1193
++ D+ D+TV A E+ S K T W NG EV P RI
Sbjct: 8 QLEVLQDI--ADLTVKAAEQAVFKCEVSD-EKVTGKWYKNGVEVRPSKRITISHVGRFHK 64
Query: 1194 YRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYVVDKPSPPQG 1236
R D G YT S SA + P G
Sbjct: 65 LVIDDV-RPEDEGDYTFVPDGYALSLSAKLNFLEIKVSGPSSG 106
Score = 55.9 bits (135), Expect = 2e-09
Identities = 20/100 (20%), Positives = 37/100 (37%), Gaps = 1/100 (1%)
Query: 183 PPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIF 242
+ + L + + K + ++ KNG V+ R + + + +
Sbjct: 8 QLEVLQDIADLTVKAAEQAVFKCEVSDEKV-TGKWYKNGVEVRPSKRITISHVGRFHKLV 66
Query: 243 IKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPIG 282
I ++R ED GDYT + S+S + GP G
Sbjct: 67 IDDVRPEDEGDYTFVPDGYALSLSAKLNFLEIKVSGPSSG 106
Score = 55.9 bits (135), Expect = 2e-09
Identities = 20/100 (20%), Positives = 37/100 (37%), Gaps = 1/100 (1%)
Query: 1790 PPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIF 1849
+ + L + + K + ++ KNG V+ R + + + +
Sbjct: 8 QLEVLQDIADLTVKAAEQAVFKCEVSDEKV-TGKWYKNGVEVRPSKRITISHVGRFHKLV 66
Query: 1850 IKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPIG 1889
I ++R ED GDYT + S+S + GP G
Sbjct: 67 IDDVRPEDEGDYTFVPDGYALSLSAKLNFLEIKVSGPSSG 106
Score = 42.0 bits (99), Expect = 2e-04
Identities = 21/87 (24%), Positives = 33/87 (37%), Gaps = 6/87 (6%)
Query: 1426 LSGVRDITVKAGED--FSIHVPFMAFPQPAAFWFANDSIIDDSDTRVHKQLTMNSASLVV 1483
L + D+TVKA E F V + + W+ N + S R+ LV+
Sbjct: 12 LQDIADLTVKAAEQAVFKCEV---SDEKVTGKWYKNGVEVRPSK-RITISHVGRFHKLVI 67
Query: 1484 KNSQRSDGGQYRLQLKNPAGFDTATLH 1510
+ + D G Y A +A L+
Sbjct: 68 DDVRPEDEGDYTFVPDGYALSLSAKLN 94
>2e7b_A Obscurin; IG-like domain, structural genomics, NPPSFA, national
project on protein structural and functional analyses;
NMR {Homo sapiens} PDB: 2yz8_A
Length = 103
Score = 91.6 bits (228), Expect = 6e-22
Identities = 18/99 (18%), Positives = 41/99 (41%), Gaps = 5/99 (5%)
Query: 477 AAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTY 536
++ L++ ++ A +C ++ P + W G+ + P ++ + EG
Sbjct: 5 SSGPVRFQEALKDLEVLEGGAATLRCVLSSVAAP-VKWCYGNNVLRPGDKYSLRQEGAML 63
Query: 537 TLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPK 575
L++ ++ D+ Y C G ++T A L + P
Sbjct: 64 ELVVRNLRPQDSGRYSCSF----GDQTTSATLTVTALPS 98
Score = 91.6 bits (228), Expect = 6e-22
Identities = 18/99 (18%), Positives = 41/99 (41%), Gaps = 5/99 (5%)
Query: 2084 AAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTY 2143
++ L++ ++ A +C ++ P + W G+ + P ++ + EG
Sbjct: 5 SSGPVRFQEALKDLEVLEGGAATLRCVLSSVAAP-VKWCYGNNVLRPGDKYSLRQEGAML 63
Query: 2144 TLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPK 2182
L++ ++ D+ Y C G ++T A L + P
Sbjct: 64 ELVVRNLRPQDSGRYSCSF----GDQTTSATLTVTALPS 98
Score = 88.2 bits (219), Expect = 1e-20
Identities = 24/94 (25%), Positives = 37/94 (39%), Gaps = 5/94 (5%)
Query: 91 PDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHF 150
F LKDL V G TL+C + P +W + G +Y + G + L
Sbjct: 9 VRFQEALKDLEVLEGGAATLRCVLSSVAAP-VKWCYGNNVLRPGDKYSLRQEGAMLELVV 67
Query: 151 NEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPP 184
+ D+G Y+C G TS+ + + P
Sbjct: 68 RNLRPQDSGRYSCSF----GDQTTSATLTVTALP 97
Score = 88.2 bits (219), Expect = 1e-20
Identities = 24/94 (25%), Positives = 37/94 (39%), Gaps = 5/94 (5%)
Query: 1698 PDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHF 1757
F LKDL V G TL+C + P +W + G +Y + G + L
Sbjct: 9 VRFQEALKDLEVLEGGAATLRCVLSSVAAP-VKWCYGNNVLRPGDKYSLRQEGAMLELVV 67
Query: 1758 NEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPP 1791
+ D+G Y+C G TS+ + + P
Sbjct: 68 RNLRPQDSGRYSCSF----GDQTTSATLTVTALP 97
Score = 57.3 bits (139), Expect = 6e-10
Identities = 21/101 (20%), Positives = 34/101 (33%), Gaps = 8/101 (7%)
Query: 1134 APKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQTI 1193
+ L +D+ VL G T+ S P W + + P +
Sbjct: 8 PVRFQEAL--KDLEVLEGGAATLRCVLSSVAAPV-KWCYGNNVLRPGDKYSLRQEGAMLE 64
Query: 1194 YRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYVVDKPSPP 1234
++ R DSG Y+ + G + S + V PS P
Sbjct: 65 LVVRNL-RPQDSGRYSC----SFGDQTTSATLTVTALPSGP 100
Score = 55.0 bits (133), Expect = 4e-09
Identities = 18/99 (18%), Positives = 33/99 (33%), Gaps = 10/99 (10%)
Query: 579 PPRF----RDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSERHAIL 634
P RF +D +G ++ + P + W N V+ G + + L
Sbjct: 8 PVRFQEALKDL-EVLEGGAATLRCVLSSVAAP-VKWCYGNNVLRPGDKYSLRQEGAMLEL 65
Query: 635 TIRDASNVDTAPYRVVAENDLGMDSAIVKIQISDRPDPP 673
+R+ D+ Y + SA + + P P
Sbjct: 66 VVRNLRPQDSGRYSCSFGDQTT--SATLTVT--ALPSGP 100
Score = 55.0 bits (133), Expect = 4e-09
Identities = 19/98 (19%), Positives = 39/98 (39%), Gaps = 5/98 (5%)
Query: 183 PPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIF 242
P R L + EG ++ + V V++ D++ + +
Sbjct: 8 PVRFQEALKDLEVLEGGAATLRCVLSSV-AAPVKWCYGNNVLRPGDKYSLRQEGAMLELV 66
Query: 243 IKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPP 280
++ +R +D+G Y+ S G + + T+ +T LP P
Sbjct: 67 VRNLRPQDSGRYSC----SFGDQTTSATLTVTALPSGP 100
Score = 55.0 bits (133), Expect = 4e-09
Identities = 19/98 (19%), Positives = 39/98 (39%), Gaps = 5/98 (5%)
Query: 1790 PPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIF 1849
P R L + EG ++ + V V++ D++ + +
Sbjct: 8 PVRFQEALKDLEVLEGGAATLRCVLSSV-AAPVKWCYGNNVLRPGDKYSLRQEGAMLELV 66
Query: 1850 IKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPP 1887
++ +R +D+G Y+ S G + + T+ +T LP P
Sbjct: 67 VRNLRPQDSGRYSC----SFGDQTTSATLTVTALPSGP 100
Score = 32.7 bits (75), Expect = 0.25
Identities = 15/74 (20%), Positives = 30/74 (40%), Gaps = 2/74 (2%)
Query: 1421 KPVMDLSGVRDITVKAGEDFSIHVPFMAFPQPAAFWFANDSIIDDSDTRVHKQLTMNSAS 1480
PV ++D+ V G ++ + P W ++++ D + +
Sbjct: 7 GPVRFQEALKDLEVLEGGAATLRCVLSSVAAPVK-WCYGNNVLRPGD-KYSLRQEGAMLE 64
Query: 1481 LVVKNSQRSDGGQY 1494
LVV+N + D G+Y
Sbjct: 65 LVVRNLRPQDSGRY 78
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain
and 4 calmodulin...; transferase, calcium dependent
protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum}
PDB: 3hzt_A* 3dxn_A 3l19_A*
Length = 494
Score = 100 bits (252), Expect = 6e-22
Identities = 24/86 (27%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 814 KTSSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSH--NLEKELIRKEIDIM 871
K + + Y ++++G+GA+G V CR++ T A K I + + +E+ ++
Sbjct: 31 KKGHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVL 90
Query: 872 NQLHHPKLINLHDAFEDDDEMVLIFE 897
L HP ++ L+D FED L+ E
Sbjct: 91 KLLDHPNIMKLYDFFEDKRNYYLVME 116
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding,
serine/threonine-protein kinase, CGD3_920, transferase;
HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB:
3dfa_A 3ma6_A*
Length = 287
Score = 97.3 bits (243), Expect = 7e-22
Identities = 23/86 (26%), Positives = 46/86 (53%), Gaps = 2/86 (2%)
Query: 814 KTSSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVS--HNLEKELIRKEIDIM 871
+ + Y+I+ +G G+FG V +C++R T +A K I + N + I +E++++
Sbjct: 16 FQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELL 75
Query: 872 NQLHHPKLINLHDAFEDDDEMVLIFE 897
+L HP ++ L + ED ++ E
Sbjct: 76 KKLDHPNIMKLFEILEDSSSFYIVGE 101
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4
calmodulin like EF...; calcium dependent protein kinase;
HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II}
PDB: 2qg5_A*
Length = 277
Score = 96.5 bits (241), Expect = 1e-21
Identities = 26/84 (30%), Positives = 45/84 (53%)
Query: 814 KTSSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQ 873
+ +Y + IG G++G V ++ T AAK IP + + ++EI+IM
Sbjct: 3 TKGDINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKS 62
Query: 874 LHHPKLINLHDAFEDDDEMVLIFE 897
L HP +I L++ FED+ ++ L+ E
Sbjct: 63 LDHPNIIRLYETFEDNTDIYLVME 86
>2d9q_B Granulocyte colony-stimulating factor receptor; cytokine,
ligand-receptor complex, signaling protein-cytokin; HET:
NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1
Length = 313
Score = 97.3 bits (241), Expect = 1e-21
Identities = 38/308 (12%), Positives = 77/308 (25%), Gaps = 18/308 (5%)
Query: 190 PNALYIPEGDNTKV-----KIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIK 244
+A + GD + D ++ + + + + II +
Sbjct: 7 VSAPIVHLGDPITASCIIKQNCSHLDPEPQILWRLGAELQPGGRQQRLSDGTQESIITLP 66
Query: 245 EIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYD 304
+ A +S + + P P + +T + W P +
Sbjct: 67 HLNHTQAFLSCSLNWGNSLQILDQVELRAGYPPAIPHNLSCLMNLTTSSLICQWEPGP-E 125
Query: 305 GGLKVTHYVVERRDISMPHWIC-------ISTTCHDTTFIVQGLTEGQEYLFHVMAVNEN 357
L + + + + + L Q V A N
Sbjct: 126 THLPTSFTLKSFKSRGNCQTQGDSILDCVPKDGQSHCSIPRKHLLLYQNMGIWVQAENAL 185
Query: 358 GMG---PPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWI 414
G + P + P + LSW+ + +
Sbjct: 186 GTSMSPQLCLDPMDVVKLEPPMLRTMDPSPEAAPPQAGCLQLSWEPWQPGLHINQK-CEL 244
Query: 415 D-KHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIK 473
K + G +W V Q + L+ Y ++ S S S++++
Sbjct: 245 RHKPQRGEASWALVGPLPLEALQYELCGLLPATAYTLQIRCIRWPLPGHWSDWSPSLELR 304
Query: 474 DPMAAKAP 481
A AP
Sbjct: 305 TTERAAAP 312
Score = 97.3 bits (241), Expect = 1e-21
Identities = 38/308 (12%), Positives = 77/308 (25%), Gaps = 18/308 (5%)
Query: 1797 PNALYIPEGDNTKV-----KIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIK 1851
+A + GD + D ++ + + + + II +
Sbjct: 7 VSAPIVHLGDPITASCIIKQNCSHLDPEPQILWRLGAELQPGGRQQRLSDGTQESIITLP 66
Query: 1852 EIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYD 1911
+ A +S + + P P + +T + W P +
Sbjct: 67 HLNHTQAFLSCSLNWGNSLQILDQVELRAGYPPAIPHNLSCLMNLTTSSLICQWEPGP-E 125
Query: 1912 GGLKVTHYVVERRDISMPHWIC-------ISTTCHDTTFIVQGLTEGQEYLFHVMAVNEN 1964
L + + + + + L Q V A N
Sbjct: 126 THLPTSFTLKSFKSRGNCQTQGDSILDCVPKDGQSHCSIPRKHLLLYQNMGIWVQAENAL 185
Query: 1965 GMG---PPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWI 2021
G + P + P + LSW+ + +
Sbjct: 186 GTSMSPQLCLDPMDVVKLEPPMLRTMDPSPEAAPPQAGCLQLSWEPWQPGLHINQK-CEL 244
Query: 2022 D-KHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIK 2080
K + G +W V Q + L+ Y ++ S S S++++
Sbjct: 245 RHKPQRGEASWALVGPLPLEALQYELCGLLPATAYTLQIRCIRWPLPGHWSDWSPSLELR 304
Query: 2081 DPMAAKAP 2088
A AP
Sbjct: 305 TTERAAAP 312
Score = 81.5 bits (200), Expect = 2e-16
Identities = 38/269 (14%), Positives = 80/269 (29%), Gaps = 20/269 (7%)
Query: 1140 DLSIRDMTVLAGEEFTITVPFS-----GRPKPTPIWTVNGDEVSPDGRIKFETSENQTIY 1194
+S+ V G+ T + P+P +W + + P GR + + Q
Sbjct: 4 HISVSAPIVHLGDPITASCIIKQNCSHLDPEPQILWRLGAELQ-PGGRQQRLSDGTQESI 62
Query: 1195 RNKSAKRATDSGSYTIQLVNTVGSDSASCKVYVVDKPSPPQGPLDVSDITPESCSLSWKP 1254
T + ++ P+ P + ++T S W+P
Sbjct: 63 ITLPHLNHTQAFLSCSLNWGNSLQILDQVELRAGYPPAIPHNLSCLMNLTTSSLICQWEP 122
Query: 1255 PLDDGGSPITNYVVEKYESATGFWSKLSSFVRSPA--------YDVFGLETNRQYRFRVR 1306
+ T++ ++ ++S ++ S + L + V+
Sbjct: 123 GPETHLP--TSFTLKSFKSRGNCQTQGDSILDCVPKDGQSHCSIPRKHLLLYQNMGIWVQ 180
Query: 1307 AENQYG--VSEPLELD-NSITAKFPFTVPDPPGQPQIVDWDTNNATLMWDRPRTDGGSKI 1363
AEN G +S L LD + P + P+ L W+ +
Sbjct: 181 AENALGTSMSPQLCLDPMDVVKLEPPMLRTMDPSPEAAPPQAGCLQLSWEPWQPGLHINQ 240
Query: 1364 QGYKMLLKTPTGELPTTIWSKIRPTSSTV 1392
+ ++ K GE + + +
Sbjct: 241 K-CELRHKPQRGEASWALVGPLPLEALQY 268
Score = 77.7 bits (190), Expect = 4e-15
Identities = 32/246 (13%), Positives = 60/246 (24%), Gaps = 46/246 (18%)
Query: 902 PHPPENLHA-DEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTKVSSYV----- 955
P P NL SL W P + T++ ++ T+ S +
Sbjct: 99 PAIPHNLSCLMNLTTSSLICQWEPGPETHLP--TSFTLKSFKSRGNCQTQGDSILDCVPK 156
Query: 956 ---TTPFVRVRNLAIGSTYEFRVMAENQYGLSKP---ALTIDPIKAKHPFDVPGAPGAPK 1009
+ + ++L + V AEN G S L + P + +P+
Sbjct: 157 DGQSHCSIPRKHLLLYQNMGIWVQAENALGTSMSPQLCLDPMDVVKLEPPMLRTMDPSPE 216
Query: 1010 GVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSE 1069
+ L W + + + K + W +
Sbjct: 217 AAPPQAGCLQLSWEPWQPGLHINQKCELRHKPQRGEASWALVGPLPLEALQY-------- 268
Query: 1070 GKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPWSSSSDIIMCC 1129
+ L+ Y ++ + G WS S +
Sbjct: 269 ------------------------ELCGLLPATAYTLQIRCIRWPLPGHWSDWSPSLELR 304
Query: 1130 APPCAP 1135
A
Sbjct: 305 TTERAA 310
Score = 71.9 bits (175), Expect = 3e-13
Identities = 30/317 (9%), Positives = 80/317 (25%), Gaps = 40/317 (12%)
Query: 95 VPLKDLVVPLGKLLTLQC-----EATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLH 149
+ + +V LG +T C + P P+ W G + R+ +
Sbjct: 5 ISVSAPIVHLGDPITASCIIKQNCSHLDPEPQILWRLGAELQPGGRQQRLSDGTQESIIT 64
Query: 150 FNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDN--------- 200
+ + + ++ G PP I + L +
Sbjct: 65 LPHLNHTQAFLSCSLNWGNSLQILDQVELRAGYPPAIPHNLSCLMNLTTSSLICQWEPGP 124
Query: 201 ------TKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDY 254
+ + + V D + ++ +++++ +
Sbjct: 125 ETHLPTSFTLKSFKSRGNCQTQGDSILDCVPKDGQSHCSIPRKHLLLYQ---------NM 175
Query: 255 TVNL--SNSSGSVS---GTFTINITGLPGPPIGP-----LDVSEITKHTCTLHWNPPKYD 304
+ + N+ G+ PP+ + + L W P +
Sbjct: 176 GIWVQAENALGTSMSPQLCLDPMDVVKLEPPMLRTMDPSPEAAPPQAGCLQLSWEPWQPG 235
Query: 305 GGLKVTHYVVERRDISMPHWICISTT-CHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPL 363
+ + + W + + + GL Y + + G
Sbjct: 236 LHINQKCELRHKPQRGEASWALVGPLPLEALQYELCGLLPATAYTLQIRCIRWPLPGHWS 295
Query: 364 EGINPIKAKSPYDKPSP 380
+ ++ ++ +P
Sbjct: 296 DWSPSLELRTTERAAAP 312
Score = 71.9 bits (175), Expect = 3e-13
Identities = 30/317 (9%), Positives = 80/317 (25%), Gaps = 40/317 (12%)
Query: 1702 VPLKDLVVPLGKLLTLQC-----EATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLH 1756
+ + +V LG +T C + P P+ W G + R+ +
Sbjct: 5 ISVSAPIVHLGDPITASCIIKQNCSHLDPEPQILWRLGAELQPGGRQQRLSDGTQESIIT 64
Query: 1757 FNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDN--------- 1807
+ + + ++ G PP I + L +
Sbjct: 65 LPHLNHTQAFLSCSLNWGNSLQILDQVELRAGYPPAIPHNLSCLMNLTTSSLICQWEPGP 124
Query: 1808 ------TKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDY 1861
+ + + V D + ++ +++++ +
Sbjct: 125 ETHLPTSFTLKSFKSRGNCQTQGDSILDCVPKDGQSHCSIPRKHLLLYQ---------NM 175
Query: 1862 TVNL--SNSSGSVS---GTFTINITGLPGPPIGP-----LDVSEITKHTCTLHWNPPKYD 1911
+ + N+ G+ PP+ + + L W P +
Sbjct: 176 GIWVQAENALGTSMSPQLCLDPMDVVKLEPPMLRTMDPSPEAAPPQAGCLQLSWEPWQPG 235
Query: 1912 GGLKVTHYVVERRDISMPHWICISTT-CHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPL 1970
+ + + W + + + GL Y + + G
Sbjct: 236 LHINQKCELRHKPQRGEASWALVGPLPLEALQYELCGLLPATAYTLQIRCIRWPLPGHWS 295
Query: 1971 EGINPIKAKSPYDKPSP 1987
+ ++ ++ +P
Sbjct: 296 DWSPSLELRTTERAAAP 312
Score = 70.0 bits (170), Expect = 2e-12
Identities = 42/288 (14%), Positives = 69/288 (23%), Gaps = 21/288 (7%)
Query: 497 NAQFQCTITGC-----PKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEY 551
C I P+P I W G+ + + + + + A
Sbjct: 17 PITASCIIKQNCSHLDPEPQILWRLGAELQPGGRQQRLSDGTQESIITLPHLNHTQAFLS 76
Query: 552 VCRAVNKGGVKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWY 611
+ EL P P T P
Sbjct: 77 CSLNWGNSLQILDQVELRAGYPPAIPHNLSCLMNLTTSSLICQWEPGPETHLPTSFTLKS 136
Query: 612 RD---NEVIESGGHFHVETSERHAILTIRDASNVDTAPY--RVVAENDLGM-DSAIVKIQ 665
N + + + +I + V AEN LG S + +
Sbjct: 137 FKSRGNCQTQGDSILDCVPKDGQSHCSIPRKHLLLYQNMGIWVQAENALGTSMSPQLCLD 196
Query: 666 ISD--RPDPPQFPTVEDIGH------DSLALVWRAPIWDGGSNITNYIVEKREHPMSSWI 717
D + +PP T++ L L W N + K + +SW
Sbjct: 197 PMDVVKLEPPMLRTMDPSPEAAPPQAGCLQLSWEPWQPGLHINQKCELRHKPQRGEASWA 256
Query: 718 RVG--NTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTK 763
VG + GL P Y ++ S S + +
Sbjct: 257 LVGPLPLEALQYELCGLLPATAYTLQIRCIRWPLPGHWSDWSPSLELR 304
Score = 56.5 bits (135), Expect = 4e-08
Identities = 21/138 (15%), Positives = 39/138 (28%), Gaps = 11/138 (7%)
Query: 1208 YTIQL--VNTVG---SDSASCKVYVVDKPSPPQGP-----LDVSDITPESCSLSWKPPLD 1257
I + N +G S V K PP + + LSW+P
Sbjct: 175 MGIWVQAENALGTSMSPQLCLDPMDVVKLEPPMLRTMDPSPEAAPPQAGCLQLSWEPWQP 234
Query: 1258 DGGSPITNYVVEKYESATGFWSKLSSF-VRSPAYDVFGLETNRQYRFRVRAENQYGVSEP 1316
+ K + W+ + + + Y++ GL Y ++R
Sbjct: 235 GLHINQKCELRHKPQRGEASWALVGPLPLEALQYELCGLLPATAYTLQIRCIRWPLPGHW 294
Query: 1317 LELDNSITAKFPFTVPDP 1334
+ S+ + P
Sbjct: 295 SDWSPSLELRTTERAAAP 312
Score = 34.5 bits (78), Expect = 0.36
Identities = 27/268 (10%), Positives = 56/268 (20%), Gaps = 81/268 (30%)
Query: 1429 VRDITVKAGEDFSIH-----VPFMAFPQPAAFWFANDSIIDDSDTRVHKQLTMNSASLVV 1483
V V G+ + P+P W + + T S + +
Sbjct: 7 VSAPIVHLGDPITASCIIKQNCSHLDPEPQILWRLGAELQPGGRQQRLSDGTQES-IITL 65
Query: 1484 KNSQRSDGGQYRLQLKNPAGFDTATLHSRLRTLPD-SVNPRCHLPSSTSKERPKFPTHPN 1542
+ + + + R P N C
Sbjct: 66 PHLNHTQAFLSCSLNWGNSLQILDQVELRAGYPPAIPHNLSCL----------------- 108
Query: 1543 HQPWLKWARASLTSKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMA 1602
++ T S+ W + P + + + + S+
Sbjct: 109 ----------------MNLTTSSLICQWEPGP-ETHLPTSFTLKSFKSRGNCQTQGDSIL 151
Query: 1603 HIPDTSLKYVLWVSEGKSIGSERGSTAQFLEREVGGAIWLKCNDYNVLECSFSVLNLVEG 1662
+ CS +L+
Sbjct: 152 DCVPKDGQS---------------------------------------HCSIPRKHLLLY 172
Query: 1663 NDYEFRIIAVNAIGKSEPS-ICTTPVKI 1689
+ + A NA+G S +C P+ +
Sbjct: 173 QNMGIWVQAENALGTSMSPQLCLDPMDV 200
Score = 33.4 bits (75), Expect = 0.93
Identities = 9/65 (13%), Positives = 18/65 (27%), Gaps = 6/65 (9%)
Query: 21 CYIIERREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGK------SEPS 74
C + + + G A W + + + L+ Y +I + S
Sbjct: 242 CELRHKPQRGEASWALVGPLPLEALQYELCGLLPATAYTLQIRCIRWPLPGHWSDWSPSL 301
Query: 75 ICTTP 79
T
Sbjct: 302 ELRTT 306
Score = 31.8 bits (71), Expect = 2.4
Identities = 11/73 (15%), Positives = 26/73 (35%), Gaps = 8/73 (10%)
Query: 18 VDDCYIIERREVGGAIWLKCNDY-------NVLECSFSVLNLVEGNDYEFRIIAVNAIGK 70
+ + ++ + G + + CS +L+ + + A NA+G
Sbjct: 128 LPTSFTLKSFKSRGNCQTQGDSILDCVPKDGQSHCSIPRKHLLLYQNMGIWVQAENALGT 187
Query: 71 SEPS-ICTTPVKI 82
S +C P+ +
Sbjct: 188 SMSPQLCLDPMDV 200
Score = 31.1 bits (69), Expect = 3.8
Identities = 13/174 (7%), Positives = 29/174 (16%), Gaps = 51/174 (29%)
Query: 1519 SVNPRCHLPSSTSKERPKFPTHPNHQPWLKWARASLTSKGVDSTEDSISLVWSKPRHDGG 1578
V L +S S + P + + + L W +
Sbjct: 178 WVQAENALGTSMSPQLCLDPMDVVKLEPPMLRTMDPSPEAAPPQAGCLQLSWEPWQPGLH 237
Query: 1579 SPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEGKSIGSERGSTAQFLEREVGG 1638
+ + + +
Sbjct: 238 INQ-KCELRHKPQRGEAS------------------------------------------ 254
Query: 1639 AIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGK------SEPSICTTP 1686
W + + + L+ Y +I + S T
Sbjct: 255 --WALVGPLPLEALQYELCGLLPATAYTLQIRCIRWPLPGHWSDWSPSLELRTT 306
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling
protein/receptor, growth regulation/complex, vitamin
K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Length = 195
Score = 93.8 bits (233), Expect = 1e-21
Identities = 28/209 (13%), Positives = 55/209 (26%), Gaps = 31/209 (14%)
Query: 481 PEIIVPLRNANAIQNHNAQFQCTI-TGCPKPTISWLKGSREITPSARHHIFAEGDTY--- 536
+ N + +C + P + WL+ + + +
Sbjct: 3 SPFVGNPGNITGARGLTGTLRCQLQVQGEPPEVHWLRDGQILELADSTQTQVPLGEDEQD 62
Query: 537 ------TLIINSVYGVDADEYVCRAVNKGG-VKSTKAELIIMTAPKFNVPPRFRDTAYFD 589
L I S+ D +Y C S + + P F P D
Sbjct: 63 DWIVVSQLRITSLQLSDTGQYQCLVFLGHQTFVSQPGYVGLEGLPYFLEEPE--DRTV-A 119
Query: 590 KGENVVVKIPFTGYPKP-KITWYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAPYR 648
+ G P+P + W +D + + ++ T+ +
Sbjct: 120 ANTPFNLSCQAQGPPEPVDLLWLQDAVPLATA-------PGHGPQRSLHVPGLNKTSSFS 172
Query: 649 VVAENDLGM---DSAIVKIQISDRPDPPQ 674
A N G+ +A + + P Q
Sbjct: 173 CEAHNAKGVTTSRTATITVL------PQQ 195
Score = 91.1 bits (226), Expect = 1e-20
Identities = 28/198 (14%), Positives = 59/198 (29%), Gaps = 20/198 (10%)
Query: 89 EKPDFIVPLKDLVVPLGKLLTLQCEATGT-PVPKCRWLRNGREISSGARYRVETAGGVFR 147
E+ F+ ++ G TL+C+ P+ WLR+G+ + + + G
Sbjct: 1 EESPFVGNPGNITGARGLTGTLRCQLQVQGEPPEVHWLRDGQILELADSTQTQVPLGEDE 60
Query: 148 ---------LHFNEVTDVDNGDYTCEAYNSVGFAHTSS-RVKIGTPPRIDRMPNALYIPE 197
L + D G Y C + + V + P P +
Sbjct: 61 QDDWIVVSQLRITSLQLSDTGQYQCLVFLGHQTFVSQPGYVGLEGLPYFLEEPEDRTVAA 120
Query: 198 GDNTKVKIFYAGD-QPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTV 256
+ G +P+++ ++ + + + ++
Sbjct: 121 NTPFNLSCQAQGPPEPVDLLWLQDAVPLATAPG-------HGPQRSLHVPGLNKTSSFSC 173
Query: 257 NLSNSSGSV-SGTFTINI 273
N+ G S T TI +
Sbjct: 174 EAHNAKGVTTSRTATITV 191
Score = 91.1 bits (226), Expect = 1e-20
Identities = 28/198 (14%), Positives = 59/198 (29%), Gaps = 20/198 (10%)
Query: 1696 EKPDFIVPLKDLVVPLGKLLTLQCEATGT-PVPKCRWLRNGREISSGARYRVETAGGVFR 1754
E+ F+ ++ G TL+C+ P+ WLR+G+ + + + G
Sbjct: 1 EESPFVGNPGNITGARGLTGTLRCQLQVQGEPPEVHWLRDGQILELADSTQTQVPLGEDE 60
Query: 1755 ---------LHFNEVTDVDNGDYTCEAYNSVGFAHTSS-RVKIGTPPRIDRMPNALYIPE 1804
L + D G Y C + + V + P P +
Sbjct: 61 QDDWIVVSQLRITSLQLSDTGQYQCLVFLGHQTFVSQPGYVGLEGLPYFLEEPEDRTVAA 120
Query: 1805 GDNTKVKIFYAGD-QPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTV 1863
+ G +P+++ ++ + + + ++
Sbjct: 121 NTPFNLSCQAQGPPEPVDLLWLQDAVPLATAPG-------HGPQRSLHVPGLNKTSSFSC 173
Query: 1864 NLSNSSGSV-SGTFTINI 1880
N+ G S T TI +
Sbjct: 174 EAHNAKGVTTSRTATITV 191
Score = 74.6 bits (183), Expect = 7e-15
Identities = 20/98 (20%), Positives = 38/98 (38%), Gaps = 8/98 (8%)
Query: 89 EKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKC-RWLRNGREISSGARYRVETAGGVFR 147
P F+ +D V L C+A G P P WL++ +++ + +
Sbjct: 105 GLPYFLEEPEDRTVAANTPFNLSCQAQGPPEPVDLLWLQDAVPLATAPGHGPQ-----RS 159
Query: 148 LHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPR 185
LH + ++CEA+N+ G + + P +
Sbjct: 160 LHVPGLNKT--SSFSCEAHNAKGVTTSRTATITVLPQQ 195
Score = 74.6 bits (183), Expect = 7e-15
Identities = 20/98 (20%), Positives = 38/98 (38%), Gaps = 8/98 (8%)
Query: 1696 EKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKC-RWLRNGREISSGARYRVETAGGVFR 1754
P F+ +D V L C+A G P P WL++ +++ + +
Sbjct: 105 GLPYFLEEPEDRTVAANTPFNLSCQAQGPPEPVDLLWLQDAVPLATAPGHGPQ-----RS 159
Query: 1755 LHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPR 1792
LH + ++CEA+N+ G + + P +
Sbjct: 160 LHVPGLNKT--SSFSCEAHNAKGVTTSRTATITVLPQQ 195
Score = 68.8 bits (168), Expect = 7e-13
Identities = 30/215 (13%), Positives = 66/215 (30%), Gaps = 31/215 (14%)
Query: 372 KSPYDKPSPPGIPVV----TQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRV 427
+P + G+ QV G+ + W + G ++ D + +
Sbjct: 7 GNPGNITGARGLTGTLRCQLQVQGEPPEVHWLR----DGQILELA--DSTQTQVPLGEDE 60
Query: 428 NVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPL 487
SQ+ I +L +++ + ++ P +
Sbjct: 61 QDDWIVVSQLRITSLQLSDTGQYQCLVFLGHQTFVSQPGYVGLEG-------LPYFLEEP 113
Query: 488 RNANAIQNHNAQFQCTITGCPKPT-ISWLKGSREITPSARHHIFAEGDTYTLIINSVYGV 546
+ N C G P+P + WL+ + + + H G +L + +
Sbjct: 114 EDRTVAANTPFNLSCQAQGPPEPVDLLWLQDAVPLATAPGH-----GPQRSLHVPGL--N 166
Query: 547 DADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPR 581
+ C A N GV +++ I + +P +
Sbjct: 167 KTSSFSCEAHNAKGVTTSRTATITV------LPQQ 195
Score = 68.8 bits (168), Expect = 7e-13
Identities = 30/215 (13%), Positives = 66/215 (30%), Gaps = 31/215 (14%)
Query: 1979 KSPYDKPSPPGIPVV----TQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRV 2034
+P + G+ QV G+ + W + G ++ D + +
Sbjct: 7 GNPGNITGARGLTGTLRCQLQVQGEPPEVHWLR----DGQILELA--DSTQTQVPLGEDE 60
Query: 2035 NVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPL 2094
SQ+ I +L +++ + ++ P +
Sbjct: 61 QDDWIVVSQLRITSLQLSDTGQYQCLVFLGHQTFVSQPGYVGLEG-------LPYFLEEP 113
Query: 2095 RNANAIQNHNAQFQCTITGCPKPT-ISWLKGSREITPSARHHIFAEGDTYTLIINSVYGV 2153
+ N C G P+P + WL+ + + + H G +L + +
Sbjct: 114 EDRTVAANTPFNLSCQAQGPPEPVDLLWLQDAVPLATAPGH-----GPQRSLHVPGL--N 166
Query: 2154 DADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPR 2188
+ C A N GV +++ I + +P +
Sbjct: 167 KTSSFSCEAHNAKGVTTSRTATITV------LPQQ 195
Score = 46.8 bits (111), Expect = 2e-05
Identities = 16/103 (15%), Positives = 33/103 (32%), Gaps = 14/103 (13%)
Query: 1134 APKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPI-WTVNGDEVSPDGRIKFETSENQT 1192
P D TV A F ++ G P+P + W + ++ ++
Sbjct: 106 LPYFLE--EPEDRTVAANTPFNLSCQAQGPPEPVDLLWLQDAVPLATAPGH----GPQRS 159
Query: 1193 IYRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYVVDKPSPPQ 1235
++ + S++ + N G ++ V P Q
Sbjct: 160 LHVP----GLNKTSSFSCEAHNAKGVTTSRTATITV---LPQQ 195
Score = 46.4 bits (110), Expect = 2e-05
Identities = 18/118 (15%), Positives = 33/118 (27%), Gaps = 17/118 (14%)
Query: 579 PPRFR---DTAYFDKGENVVVK-IPFTGYPKPKITWYRDNEVIESG---------GHFHV 625
F +G ++ P++ W RD +++E G
Sbjct: 2 ESPFVGNPGNITGARGLTGTLRCQLQVQGEPPEVHWLRDGQILELADSTQTQVPLGEDEQ 61
Query: 626 ETSERHAILTIRDASNVDTAPYRVVAENDLG-MDSAIVKIQISDRPD---PPQFPTVE 679
+ + L I DT Y+ + S + + P P+ TV
Sbjct: 62 DDWIVVSQLRITSLQLSDTGQYQCLVFLGHQTFVSQPGYVGLEGLPYFLEEPEDRTVA 119
Score = 36.8 bits (85), Expect = 0.043
Identities = 14/108 (12%), Positives = 31/108 (28%), Gaps = 10/108 (9%)
Query: 1144 RDMTVLAGEEFTIT-VPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQTIYRNKSAK-- 1200
++T G T+ P W +G + + + + +
Sbjct: 10 GNITGARGLTGTLRCQLQVQGEPPEVHWLRDGQILELADSTQTQVPLGEDEQDDWIVVSQ 69
Query: 1201 ------RATDSGSYTIQLVNTVGS-DSASCKVYVVDKPSPPQGPLDVS 1241
+ +D+G Y + + S V + P + P D +
Sbjct: 70 LRITSLQLSDTGQYQCLVFLGHQTFVSQPGYVGLEGLPYFLEEPEDRT 117
Score = 34.5 bits (79), Expect = 0.22
Identities = 14/83 (16%), Positives = 30/83 (36%), Gaps = 9/83 (10%)
Query: 1430 RDITVKAGEDFSIH-VPFMAFPQPAAFWFANDSIIDDSDTRV--------HKQLTMNSAS 1480
+IT G ++ + P W + I++ +D+ + + +
Sbjct: 10 GNITGARGLTGTLRCQLQVQGEPPEVHWLRDGQILELADSTQTQVPLGEDEQDDWIVVSQ 69
Query: 1481 LVVKNSQRSDGGQYRLQLKNPAG 1503
L + + Q SD GQY+ +
Sbjct: 70 LRITSLQLSDTGQYQCLVFLGHQ 92
Score = 32.2 bits (73), Expect = 1.2
Identities = 13/85 (15%), Positives = 24/85 (28%), Gaps = 12/85 (14%)
Query: 1430 RDITVKAGEDFSIHVPFMAFPQPAA-FWFANDSIIDDSDTRVHKQLTMNSASLVVKNSQR 1488
D TV A F++ P+P W + + + +
Sbjct: 114 EDRTVAANTPFNLSCQAQGPPEPVDLLWLQDAVPLATAPGH--------GPQRSLHVPGL 165
Query: 1489 SDGGQYRLQLKNPAGF---DTATLH 1510
+ + + N G TAT+
Sbjct: 166 NKTSSFSCEAHNAKGVTTSRTATIT 190
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein
kinase, transferase, calcium-bindin binding, bumped
kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium
parvum} PDB: 3igo_A* 3ncg_A*
Length = 486
Score = 99.8 bits (249), Expect = 1e-21
Identities = 23/86 (26%), Positives = 46/86 (53%), Gaps = 2/86 (2%)
Query: 814 KTSSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSH--NLEKELIRKEIDIM 871
+ + Y+I+ +G G+FG V +C++R T +A K I + N + I +E++++
Sbjct: 16 FQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELL 75
Query: 872 NQLHHPKLINLHDAFEDDDEMVLIFE 897
+L HP ++ L + ED ++ E
Sbjct: 76 KKLDHPNIMKLFEILEDSSSFYIVGE 101
>2edh_A Obscurin; structural genomics, NPPSFA, national project on P
structural and functional analyses, riken structural
genomics/proteomics initiative; NMR {Homo sapiens}
Length = 113
Score = 90.9 bits (226), Expect = 1e-21
Identities = 29/119 (24%), Positives = 46/119 (38%), Gaps = 13/119 (10%)
Query: 456 NEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWL 515
+ S +SA +V+ A + LRN A + A +C ++ + W
Sbjct: 2 SSGS-SGRTSAMLTVR------ALPIKFTEGLRNEEATEGATAVLRCELSK--MAPVEWW 52
Query: 516 KGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAP 574
KG + RH + +G L I + DA EY+C G + T A L + P
Sbjct: 53 KGHETLRDGDRHSLRQDGARCELQIRGLVAEDAGEYLCMC----GKERTSAMLTVRAMP 107
Score = 90.9 bits (226), Expect = 1e-21
Identities = 29/119 (24%), Positives = 46/119 (38%), Gaps = 13/119 (10%)
Query: 2063 NEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWL 2122
+ S +SA +V+ A + LRN A + A +C ++ + W
Sbjct: 2 SSGS-SGRTSAMLTVR------ALPIKFTEGLRNEEATEGATAVLRCELSK--MAPVEWW 52
Query: 2123 KGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAP 2181
KG + RH + +G L I + DA EY+C G + T A L + P
Sbjct: 53 KGHETLRDGDRHSLRQDGARCELQIRGLVAEDAGEYLCMC----GKERTSAMLTVRAMP 107
Score = 87.4 bits (217), Expect = 2e-20
Identities = 20/100 (20%), Positives = 33/100 (33%), Gaps = 6/100 (6%)
Query: 85 FVGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGG 144
V F L++ G L+CE + W + + G R+ + G
Sbjct: 14 TVRALPIKFTEGLRNEEATEGATAVLRCELSKMA--PVEWWKGHETLRDGDRHSLRQDGA 71
Query: 145 VFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPP 184
L + D G+Y C G TS+ + + P
Sbjct: 72 RCELQIRGLVAEDAGEYLCMC----GKERTSAMLTVRAMP 107
Score = 87.4 bits (217), Expect = 2e-20
Identities = 20/100 (20%), Positives = 33/100 (33%), Gaps = 6/100 (6%)
Query: 1692 FVGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGG 1751
V F L++ G L+CE + W + + G R+ + G
Sbjct: 14 TVRALPIKFTEGLRNEEATEGATAVLRCELSKMA--PVEWWKGHETLRDGDRHSLRQDGA 71
Query: 1752 VFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPP 1791
L + D G+Y C G TS+ + + P
Sbjct: 72 RCELQIRGLVAEDAGEYLCMC----GKERTSAMLTVRAMP 107
Score = 62.0 bits (151), Expect = 2e-11
Identities = 20/119 (16%), Positives = 37/119 (31%), Gaps = 10/119 (8%)
Query: 557 NKGGVKSTKAELIIM-TAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNE 615
+ G T A L + KF R + +G V++ + + W++ +E
Sbjct: 2 SSGSSGRTSAMLTVRALPIKFTEGLR--NE-EATEGATAVLRCELSK--MAPVEWWKGHE 56
Query: 616 VIESGGHFHVETSERHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQISDRPDPPQ 674
+ G + L IR D Y + G + + + P P
Sbjct: 57 TLRDGDRHSLRQDGARCELQIRGLVAEDAGEYLCMC----GKERTSAMLTVRAMPSGPS 111
Score = 60.1 bits (146), Expect = 1e-10
Identities = 22/124 (17%), Positives = 37/124 (29%), Gaps = 14/124 (11%)
Query: 1112 NAAGQGPWSSSSDIIMCCAPPCAPKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWT 1171
++ G +S ++ A P K T L R+ G + S W
Sbjct: 2 SSGSSG---RTSAMLTVRALP--IKFTEGL--RNEEATEGATAVLRCELSKMAPVE--WW 52
Query: 1172 VNGDEVSPDGRIKFETSENQTIYRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYVVDKP 1231
+ + R + + + A D+G Y G + S + V P
Sbjct: 53 KGHETLRDGDRHSLRQDGARCELQIRGL-VAEDAGEYLCM----CGKERTSAMLTVRAMP 107
Query: 1232 SPPQ 1235
S P
Sbjct: 108 SGPS 111
Score = 56.2 bits (136), Expect = 2e-09
Identities = 20/115 (17%), Positives = 38/115 (33%), Gaps = 7/115 (6%)
Query: 167 NSVGFAHTSSRVKI-GTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQ 225
+S TS+ + + P + EG ++ + P V K ++
Sbjct: 2 SSGSSGRTSAMLTVRALPIKFTEGLRNEEATEGATAVLRCELSKMAP--VEWWKGHETLR 59
Query: 226 SDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPP 280
DR + I+ + EDAG+Y G + + + +P P
Sbjct: 60 DGDRHSLRQDGARCELQIRGLVAEDAGEYLC----MCGKERTSAMLTVRAMPSGP 110
Score = 56.2 bits (136), Expect = 2e-09
Identities = 20/115 (17%), Positives = 38/115 (33%), Gaps = 7/115 (6%)
Query: 1774 NSVGFAHTSSRVKI-GTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQ 1832
+S TS+ + + P + EG ++ + P V K ++
Sbjct: 2 SSGSSGRTSAMLTVRALPIKFTEGLRNEEATEGATAVLRCELSKMAP--VEWWKGHETLR 59
Query: 1833 SDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPP 1887
DR + I+ + EDAG+Y G + + + +P P
Sbjct: 60 DGDRHSLRQDGARCELQIRGLVAEDAGEYLC----MCGKERTSAMLTVRAMPSGP 110
Score = 34.3 bits (79), Expect = 0.082
Identities = 18/94 (19%), Positives = 30/94 (31%), Gaps = 7/94 (7%)
Query: 1401 SSNSEPGKQSGPVIVEEQPNKPVMDLSGVRDITVKAGEDFSIHVPFMAFPQPAAFWFAND 1460
SS S G+ S + V P+ G+R+ G + W+
Sbjct: 2 SSGSS-GRTSAMLTVRA---LPIKFTEGLRNEEATEGATAVLRC--ELSKMAPVEWWKGH 55
Query: 1461 SIIDDSDTRVHKQLTMNSASLVVKNSQRSDGGQY 1494
+ D D R + L ++ D G+Y
Sbjct: 56 ETLRDGD-RHSLRQDGARCELQIRGLVAEDAGEY 88
>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain,
SLOW-type myosin-binding protein C, structural genomics,
NPPSFA; NMR {Homo sapiens}
Length = 100
Score = 90.5 bits (225), Expect = 1e-21
Identities = 25/99 (25%), Positives = 38/99 (38%), Gaps = 4/99 (4%)
Query: 86 VGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGV 145
G + PL D V LGK + L+CE + K W +NG + R +V G +
Sbjct: 3 SGSSGLKILTPLTDQTVNLGKEICLKCEISENIPGK--WTKNGLPVQESDRLKVVQKGRI 60
Query: 146 FRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPP 184
+L D GDY ++V + + P
Sbjct: 61 HKLVIANALTEDEGDYVFAPDA--YNVTLPAKVHVISGP 97
Score = 90.5 bits (225), Expect = 1e-21
Identities = 25/99 (25%), Positives = 38/99 (38%), Gaps = 4/99 (4%)
Query: 1693 VGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGV 1752
G + PL D V LGK + L+CE + K W +NG + R +V G +
Sbjct: 3 SGSSGLKILTPLTDQTVNLGKEICLKCEISENIPGK--WTKNGLPVQESDRLKVVQKGRI 60
Query: 1753 FRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPP 1791
+L D GDY ++V + + P
Sbjct: 61 HKLVIANALTEDEGDYVFAPDA--YNVTLPAKVHVISGP 97
Score = 90.1 bits (224), Expect = 2e-21
Identities = 17/98 (17%), Positives = 36/98 (36%), Gaps = 4/98 (4%)
Query: 477 AAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTY 536
+ +I+ PL + +C I+ W K + S R + +G +
Sbjct: 4 GSSGLKILTPLTDQTVNLGKEICLKCEISENIPGK--WTKNGLPVQESDRLKVVQKGRIH 61
Query: 537 TLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAP 574
L+I + D +YV + A++ +++ P
Sbjct: 62 KLVIANALTEDEGDYVF--APDAYNVTLPAKVHVISGP 97
Score = 90.1 bits (224), Expect = 2e-21
Identities = 17/98 (17%), Positives = 36/98 (36%), Gaps = 4/98 (4%)
Query: 2084 AAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTY 2143
+ +I+ PL + +C I+ W K + S R + +G +
Sbjct: 4 GSSGLKILTPLTDQTVNLGKEICLKCEISENIPGK--WTKNGLPVQESDRLKVVQKGRIH 61
Query: 2144 TLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAP 2181
L+I + D +YV + A++ +++ P
Sbjct: 62 KLVIANALTEDEGDYVF--APDAYNVTLPAKVHVISGP 97
Score = 65.0 bits (159), Expect = 1e-12
Identities = 25/99 (25%), Positives = 34/99 (34%), Gaps = 7/99 (7%)
Query: 1134 APKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQTI 1193
KI + L D TV G+E + S WT NG V R+K
Sbjct: 7 GLKILTPL--TDQTVNLGKEICLKCEISENIPGK--WTKNGLPVQESDRLKVVQKGRIHK 62
Query: 1194 YRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYVVDKPS 1232
+A D G Y + + KV+V+ PS
Sbjct: 63 LVIANA-LTEDEGDYVF--APDAYNVTLPAKVHVISGPS 98
Score = 54.6 bits (132), Expect = 5e-09
Identities = 16/101 (15%), Positives = 28/101 (27%), Gaps = 10/101 (9%)
Query: 573 APKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSERHA 632
K P D + G+ + +K + W ++ ++ V R
Sbjct: 7 GLKILTPLT--DQ-TVNLGKEICLKCEISE--NIPGKWTKNGLPVQESDRLKVVQKGRIH 61
Query: 633 ILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQISDRPDPP 673
L I +A D Y + A V + P
Sbjct: 62 KLVIANALTEDEGDYVFAPDAYNVTLPAKVHVI-----SGP 97
Score = 51.6 bits (124), Expect = 5e-08
Identities = 21/96 (21%), Positives = 34/96 (35%), Gaps = 4/96 (4%)
Query: 183 PPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIF 242
+I + G +K + + P TKNG VQ DR K +
Sbjct: 7 GLKILTPLTDQTVNLGKEICLKCEISENIP--GKWTKNGLPVQESDRLKVVQKGRIHKLV 64
Query: 243 IKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPG 278
I ED GDY + + +V+ +++ P
Sbjct: 65 IANALTEDEGDYVF--APDAYNVTLPAKVHVISGPS 98
Score = 51.6 bits (124), Expect = 5e-08
Identities = 21/96 (21%), Positives = 34/96 (35%), Gaps = 4/96 (4%)
Query: 1790 PPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIF 1849
+I + G +K + + P TKNG VQ DR K +
Sbjct: 7 GLKILTPLTDQTVNLGKEICLKCEISENIP--GKWTKNGLPVQESDRLKVVQKGRIHKLV 64
Query: 1850 IKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPG 1885
I ED GDY + + +V+ +++ P
Sbjct: 65 IANALTEDEGDYVF--APDAYNVTLPAKVHVISGPS 98
Score = 39.2 bits (92), Expect = 0.001
Identities = 20/94 (21%), Positives = 32/94 (34%), Gaps = 5/94 (5%)
Query: 1426 LSGVRDITVKAGEDFSIHVPFMAFPQPAAFWFANDSIIDDSDTRVHKQLTMNSASLVVKN 1485
L+ + D TV G++ + W N + +SD R+ LV+ N
Sbjct: 11 LTPLTDQTVNLGKEICLKCEISENIPGK--WTKNGLPVQESD-RLKVVQKGRIHKLVIAN 67
Query: 1486 SQRSDGGQYRLQLKNPAGFDTATLHSRLRTLPDS 1519
+ D G Y A T + + P S
Sbjct: 68 ALTEDEGDY--VFAPDAYNVTLPAKVHVISGPSS 99
>2edf_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 103
Score = 90.4 bits (225), Expect = 2e-21
Identities = 27/94 (28%), Positives = 39/94 (41%), Gaps = 1/94 (1%)
Query: 91 PDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHF 150
I PL+D V G+ + L+CE + P WL++ + I +Y V G + L
Sbjct: 9 AAIIKPLEDQWVAPGEDVELRCELSRAGTP-VHWLKDRKAIRKSQKYDVVCEGTMAMLVI 67
Query: 151 NEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPP 184
+ D G+YTCE S A K P
Sbjct: 68 RGASLKDAGEYTCEVEASKSTASLHVEEKASGPS 101
Score = 90.4 bits (225), Expect = 2e-21
Identities = 27/94 (28%), Positives = 39/94 (41%), Gaps = 1/94 (1%)
Query: 1698 PDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHF 1757
I PL+D V G+ + L+CE + P WL++ + I +Y V G + L
Sbjct: 9 AAIIKPLEDQWVAPGEDVELRCELSRAGTP-VHWLKDRKAIRKSQKYDVVCEGTMAMLVI 67
Query: 1758 NEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPP 1791
+ D G+YTCE S A K P
Sbjct: 68 RGASLKDAGEYTCEVEASKSTASLHVEEKASGPS 101
Score = 88.5 bits (220), Expect = 6e-21
Identities = 22/94 (23%), Positives = 38/94 (40%), Gaps = 5/94 (5%)
Query: 477 AAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTY 536
++ II PL + + + +C ++ P + WLK + I S ++ + EG
Sbjct: 5 SSGPAAIIKPLEDQWVAPGEDVELRCELSRAGTP-VHWLKDRKAIRKSQKYDVVCEGTMA 63
Query: 537 TLIINSVYGVDADEYVCRAVNKGGVKSTKAELII 570
L+I DA EY C + A L +
Sbjct: 64 MLVIRGASLKDAGEYTCEVEA----SKSTASLHV 93
Score = 88.5 bits (220), Expect = 6e-21
Identities = 22/94 (23%), Positives = 38/94 (40%), Gaps = 5/94 (5%)
Query: 2084 AAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTY 2143
++ II PL + + + +C ++ P + WLK + I S ++ + EG
Sbjct: 5 SSGPAAIIKPLEDQWVAPGEDVELRCELSRAGTP-VHWLKDRKAIRKSQKYDVVCEGTMA 63
Query: 2144 TLIINSVYGVDADEYVCRAVNKGGVKSTKAELII 2177
L+I DA EY C + A L +
Sbjct: 64 MLVIRGASLKDAGEYTCEVEA----SKSTASLHV 93
Score = 61.5 bits (150), Expect = 2e-11
Identities = 21/99 (21%), Positives = 37/99 (37%), Gaps = 10/99 (10%)
Query: 579 PPRF----RDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSERHAIL 634
P D + GE+V ++ + P + W +D + I + V A+L
Sbjct: 8 PAAIIKPLEDQ-WVAPGEDVELRCELSRAGTP-VHWLKDRKAIRKSQKYDVVCEGTMAML 65
Query: 635 TIRDASNVDTAPYRVVAENDLGMDSAIVKIQISDRPDPP 673
IR AS D Y E +A + ++ ++ P
Sbjct: 66 VIRGASLKDAGEYTCEVEASKS--TASLHVE--EKASGP 100
Score = 55.4 bits (134), Expect = 3e-09
Identities = 20/105 (19%), Positives = 36/105 (34%), Gaps = 10/105 (9%)
Query: 1130 APPCAPKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSE 1189
+ P I L D V GE+ + S P W + + +
Sbjct: 6 SGP--AAIIKPL--EDQWVAPGEDVELRCELSRAGTPV-HWLKDRKAIRKSQKYDVVCEG 60
Query: 1190 NQTIYRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYVVDKPSPP 1234
+ + A D+G YT + V + ++ ++V +K S P
Sbjct: 61 TMAMLVIRGAS-LKDAGEYTCE----VEASKSTASLHVEEKASGP 100
Score = 53.8 bits (130), Expect = 1e-08
Identities = 13/98 (13%), Positives = 39/98 (39%), Gaps = 5/98 (5%)
Query: 183 PPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIF 242
P I + ++ G++ +++ + V K+ + ++ ++ ++
Sbjct: 8 PAAIIKPLEDQWVAPGEDVELRCELSRA-GTPVHWLKDRKAIRKSQKYDVVCEGTMAMLV 66
Query: 243 IKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPP 280
I+ +DAG+YT + S + ++++ P
Sbjct: 67 IRGASLKDAGEYTCEVEASKST----ASLHVEEKASGP 100
Score = 53.8 bits (130), Expect = 1e-08
Identities = 13/98 (13%), Positives = 39/98 (39%), Gaps = 5/98 (5%)
Query: 1790 PPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIF 1849
P I + ++ G++ +++ + V K+ + ++ ++ ++
Sbjct: 8 PAAIIKPLEDQWVAPGEDVELRCELSRA-GTPVHWLKDRKAIRKSQKYDVVCEGTMAMLV 66
Query: 1850 IKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPP 1887
I+ +DAG+YT + S + ++++ P
Sbjct: 67 IRGASLKDAGEYTCEVEASKST----ASLHVEEKASGP 100
Score = 40.4 bits (95), Expect = 5e-04
Identities = 21/98 (21%), Positives = 35/98 (35%), Gaps = 4/98 (4%)
Query: 1422 PVMDLSGVRDITVKAGEDFSIHVPFMAFPQPAAFWFANDSIIDDSDTRVHKQLTMNSASL 1481
P + + D V GED + P W + I S + A L
Sbjct: 8 PAAIIKPLEDQWVAPGEDVELRCELSRAGTPVH-WLKDRKAIRKSQ-KYDVVCEGTMAML 65
Query: 1482 VVKNSQRSDGGQYRLQLKNPAGFDTATLHSRLRTLPDS 1519
V++ + D G+Y +++ TA+LH + S
Sbjct: 66 VIRGASLKDAGEYTCEVEASKS--TASLHVEEKASGPS 101
>2eny_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 104
Score = 90.5 bits (225), Expect = 2e-21
Identities = 19/100 (19%), Positives = 37/100 (37%), Gaps = 5/100 (5%)
Query: 477 AAKAPEIIVPLRNANAIQNHNAQFQCTIT-GCPKPTISWLKGSREITPSARHHIFAEGDT 535
++ I L+ ++ + F+C ++ W G + + S+R +G
Sbjct: 5 SSGHVGITKRLKTMEVLEGESCSFECVLSHESASDPAMWTVGGKTVGSSSRFQATRQGRK 64
Query: 536 YTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPK 575
Y L++ DA E V ++KA LI+
Sbjct: 65 YILVVREAAPSDAGEVVFSVRG----LTSKASLIVRERSG 100
Score = 90.5 bits (225), Expect = 2e-21
Identities = 19/100 (19%), Positives = 37/100 (37%), Gaps = 5/100 (5%)
Query: 2084 AAKAPEIIVPLRNANAIQNHNAQFQCTIT-GCPKPTISWLKGSREITPSARHHIFAEGDT 2142
++ I L+ ++ + F+C ++ W G + + S+R +G
Sbjct: 5 SSGHVGITKRLKTMEVLEGESCSFECVLSHESASDPAMWTVGGKTVGSSSRFQATRQGRK 64
Query: 2143 YTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPK 2182
Y L++ DA E V ++KA LI+
Sbjct: 65 YILVVREAAPSDAGEVVFSVRG----LTSKASLIVRERSG 100
Score = 81.7 bits (202), Expect = 2e-18
Identities = 15/84 (17%), Positives = 28/84 (33%), Gaps = 1/84 (1%)
Query: 91 PDFIVPLKDLVVPLGKLLTLQCEAT-GTPVPKCRWLRNGREISSGARYRVETAGGVFRLH 149
LK + V G+ + +C + + W G+ + S +R++ G + L
Sbjct: 9 VGITKRLKTMEVLEGESCSFECVLSHESASDPAMWTVGGKTVGSSSRFQATRQGRKYILV 68
Query: 150 FNEVTDVDNGDYTCEAYNSVGFAH 173
E D G+ A
Sbjct: 69 VREAAPSDAGEVVFSVRGLTSKAS 92
Score = 81.7 bits (202), Expect = 2e-18
Identities = 15/84 (17%), Positives = 28/84 (33%), Gaps = 1/84 (1%)
Query: 1698 PDFIVPLKDLVVPLGKLLTLQCEAT-GTPVPKCRWLRNGREISSGARYRVETAGGVFRLH 1756
LK + V G+ + +C + + W G+ + S +R++ G + L
Sbjct: 9 VGITKRLKTMEVLEGESCSFECVLSHESASDPAMWTVGGKTVGSSSRFQATRQGRKYILV 68
Query: 1757 FNEVTDVDNGDYTCEAYNSVGFAH 1780
E D G+ A
Sbjct: 69 VREAAPSDAGEVVFSVRGLTSKAS 92
Score = 63.6 bits (155), Expect = 4e-12
Identities = 23/108 (21%), Positives = 37/108 (34%), Gaps = 8/108 (7%)
Query: 1130 APPCAPKITSDLSIRDMTVLAGEEFTITVPFS-GRPKPTPIWTVNGDEVSPDGRIKFETS 1188
IT L + M VL GE + S +WTV G V R +
Sbjct: 4 GSSGHVGITKRL--KTMEVLEGESCSFECVLSHESASDPAMWTVGGKTVGSSSRFQATRQ 61
Query: 1189 ENQTIYRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYVVDKPSPPQG 1236
+ I + A +D+G +V ++ + V ++ P G
Sbjct: 62 GRKYILVVREA-APSDAGEVVF----SVRGLTSKASLIVRERSGPSSG 104
Score = 58.6 bits (142), Expect = 2e-10
Identities = 16/85 (18%), Positives = 26/85 (30%), Gaps = 5/85 (5%)
Query: 591 GENVVVKIPFT-GYPKPKITWYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAPYRV 649
GE+ + + W + + S F R IL +R+A+ D
Sbjct: 23 GESCSFECVLSHESASDPAMWTVGGKTVGSSSRFQATRQGRKYILVVREAAPSDAGEVVF 82
Query: 650 VAENDLGMDSAIVKIQISDRPDPPQ 674
S IV+ +R P
Sbjct: 83 SVRGLTSKASLIVR----ERSGPSS 103
Score = 52.4 bits (126), Expect = 4e-08
Identities = 19/101 (18%), Positives = 37/101 (36%), Gaps = 5/101 (4%)
Query: 183 PPRIDRMPNALYIPEGDNTKVK-IFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIII 241
I + + + EG++ + + T G+ V S RF+ T I+
Sbjct: 8 HVGITKRLKTMEVLEGESCSFECVLSHESASDPAMWTVGGKTVGSSSRFQATRQGRKYIL 67
Query: 242 FIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPIG 282
++E DAG+ S ++ ++ + GP G
Sbjct: 68 VVREAAPSDAGEVVF----SVRGLTSKASLIVRERSGPSSG 104
Score = 52.4 bits (126), Expect = 4e-08
Identities = 19/101 (18%), Positives = 37/101 (36%), Gaps = 5/101 (4%)
Query: 1790 PPRIDRMPNALYIPEGDNTKVK-IFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIII 1848
I + + + EG++ + + T G+ V S RF+ T I+
Sbjct: 8 HVGITKRLKTMEVLEGESCSFECVLSHESASDPAMWTVGGKTVGSSSRFQATRQGRKYIL 67
Query: 1849 FIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPIG 1889
++E DAG+ S ++ ++ + GP G
Sbjct: 68 VVREAAPSDAGEVVF----SVRGLTSKASLIVRERSGPSSG 104
Score = 43.1 bits (102), Expect = 7e-05
Identities = 21/100 (21%), Positives = 33/100 (33%), Gaps = 6/100 (6%)
Query: 1422 PVMDLSGVRDITVKAGED--FSIHVPFMAFPQPAAFWFANDSIIDDSDTRVHKQLTMNSA 1479
V ++ + V GE F + A W + S R
Sbjct: 8 HVGITKRLKTMEVLEGESCSFECVLSH-ESASDPAMWTVGGKTVGSSS-RFQATRQGRKY 65
Query: 1480 SLVVKNSQRSDGGQYRLQLKNPAGFDTATLHSRLRTLPDS 1519
LVV+ + SD G+ ++ A+L R R+ P S
Sbjct: 66 ILVVREAAPSDAGEVVFSVRGLTS--KASLIVRERSGPSS 103
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase,
serine/threonine-protein, ATP-binding,
calmodulin-binding; HET: ATP; 2.20A {Oryctolagus
cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Length = 298
Score = 96.2 bits (240), Expect = 2e-21
Identities = 29/98 (29%), Positives = 46/98 (46%), Gaps = 10/98 (10%)
Query: 810 PVDIKTSSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLE--------- 860
P T Y++Y+ E +G G VV RC + T +A K I V+
Sbjct: 7 PGSHSTHGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQEL 66
Query: 861 KELIRKEIDIMNQL-HHPKLINLHDAFEDDDEMVLIFE 897
+E KE+DI+ ++ HP +I L D +E + L+F+
Sbjct: 67 REATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFD 104
>2dm7_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} PDB: 2edl_A
2edw_A 2gqh_A 2edt_A 2edq_A 2edr_A
Length = 108
Score = 89.7 bits (223), Expect = 3e-21
Identities = 22/98 (22%), Positives = 37/98 (37%), Gaps = 6/98 (6%)
Query: 477 AAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTY 536
++ L+ A + A QC ++ + W KG + R+ + +G
Sbjct: 5 SSGPARFTQDLKTKEASEGATATLQCELS--KVAPVEWKKGPETLRDGGRYSLKQDGTRC 62
Query: 537 TLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAP 574
L I+ + DA EY C G + T A L + P
Sbjct: 63 ELQIHDLSVADAGEYSCMC----GQERTSATLTVRALP 96
Score = 89.7 bits (223), Expect = 3e-21
Identities = 22/98 (22%), Positives = 37/98 (37%), Gaps = 6/98 (6%)
Query: 2084 AAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTY 2143
++ L+ A + A QC ++ + W KG + R+ + +G
Sbjct: 5 SSGPARFTQDLKTKEASEGATATLQCELS--KVAPVEWKKGPETLRDGGRYSLKQDGTRC 62
Query: 2144 TLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAP 2181
L I+ + DA EY C G + T A L + P
Sbjct: 63 ELQIHDLSVADAGEYSCMC----GQERTSATLTVRALP 96
Score = 84.3 bits (209), Expect = 2e-19
Identities = 24/94 (25%), Positives = 38/94 (40%), Gaps = 6/94 (6%)
Query: 91 PDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHF 150
F LK G TLQCE + V W + + G RY ++ G L
Sbjct: 9 ARFTQDLKTKEASEGATATLQCELS--KVAPVEWKKGPETLRDGGRYSLKQDGTRCELQI 66
Query: 151 NEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPP 184
++++ D G+Y+C G TS+ + + P
Sbjct: 67 HDLSVADAGEYSCMC----GQERTSATLTVRALP 96
Score = 84.3 bits (209), Expect = 2e-19
Identities = 24/94 (25%), Positives = 38/94 (40%), Gaps = 6/94 (6%)
Query: 1698 PDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHF 1757
F LK G TLQCE + V W + + G RY ++ G L
Sbjct: 9 ARFTQDLKTKEASEGATATLQCELS--KVAPVEWKKGPETLRDGGRYSLKQDGTRCELQI 66
Query: 1758 NEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPP 1791
++++ D G+Y+C G TS+ + + P
Sbjct: 67 HDLSVADAGEYSCMC----GQERTSATLTVRALP 96
Score = 51.6 bits (124), Expect = 7e-08
Identities = 10/51 (19%), Positives = 18/51 (35%)
Query: 604 PKPKITWYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAPYRVVAEND 654
+ W + E + GG + ++ L I D S D Y + +
Sbjct: 34 KVAPVEWKKGPETLRDGGRYSLKQDGTRCELQIHDLSVADAGEYSCMCGQE 84
Score = 50.5 bits (121), Expect = 2e-07
Identities = 16/98 (16%), Positives = 28/98 (28%), Gaps = 9/98 (9%)
Query: 1134 APKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQTI 1193
+ T DL + G T+ S W + + GR + +
Sbjct: 8 PARFTQDL--KTKEASEGATATLQCELS--KVAPVEWKKGPETLRDGGRYSLKQDGTRCE 63
Query: 1194 YRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYVVDKP 1231
+ D+G Y+ G + S + V P
Sbjct: 64 LQIHDL-SVADAGEYSCM----CGQERTSATLTVRALP 96
Score = 45.4 bits (108), Expect = 9e-06
Identities = 16/97 (16%), Positives = 31/97 (31%), Gaps = 10/97 (10%)
Query: 183 PPRIDRMPNALYIPEGDNTK--VKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYII 240
P R + EG ++ + V K ++ R+
Sbjct: 8 PARFTQDLKTKEASEGATATLQCEL----SKVAPVEWKKGPETLRDGGRYSLKQDGTRCE 63
Query: 241 IFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLP 277
+ I ++ DAG+Y+ G + T+ + LP
Sbjct: 64 LQIHDLSVADAGEYSC----MCGQERTSATLTVRALP 96
Score = 45.4 bits (108), Expect = 9e-06
Identities = 16/97 (16%), Positives = 31/97 (31%), Gaps = 10/97 (10%)
Query: 1790 PPRIDRMPNALYIPEGDNTK--VKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYII 1847
P R + EG ++ + V K ++ R+
Sbjct: 8 PARFTQDLKTKEASEGATATLQCEL----SKVAPVEWKKGPETLRDGGRYSLKQDGTRCE 63
Query: 1848 IFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLP 1884
+ I ++ DAG+Y+ G + T+ + LP
Sbjct: 64 LQIHDLSVADAGEYSC----MCGQERTSATLTVRALP 96
Score = 32.3 bits (74), Expect = 0.43
Identities = 9/74 (12%), Positives = 19/74 (25%), Gaps = 3/74 (4%)
Query: 1421 KPVMDLSGVRDITVKAGEDFSIHVPFMAFPQPAAFWFANDSIIDDSDTRVHKQLTMNSAS 1480
P ++ G ++ W + D R +
Sbjct: 7 GPARFTQDLKTKEASEGATATLQC--ELSKVAPVEWKKGPETLRDGG-RYSLKQDGTRCE 63
Query: 1481 LVVKNSQRSDGGQY 1494
L + + +D G+Y
Sbjct: 64 LQIHDLSVADAGEY 77
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2,
autoinhibitory, ATP-binding, nucleotide phosphorylation,
serine/threonine-protein kinase; 2.00A {Mus musculus}
PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Length = 342
Score = 96.6 bits (241), Expect = 3e-21
Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 5/85 (5%)
Query: 814 KTSSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQ 873
+ D Y++ E+IG G++ V RC + T FA K I S K +EI+I+ +
Sbjct: 16 NSIQFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKS----KRDPTEEIEILLR 71
Query: 874 L-HHPKLINLHDAFEDDDEMVLIFE 897
HP +I L D ++D + ++ E
Sbjct: 72 YGQHPNIITLKDVYDDGKYVYVVTE 96
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV;
calmodulin-binding, nucleotide-binding,
serine/threonine-protein kinase, ATP-binding; HET: DKI;
2.17A {Homo sapiens}
Length = 349
Score = 96.6 bits (241), Expect = 3e-21
Identities = 25/84 (29%), Positives = 51/84 (60%), Gaps = 2/84 (2%)
Query: 814 KTSSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQ 873
++ D +++ E+G GA +V+RC+++ T +A K + + ++K+++R EI ++ +
Sbjct: 47 NRDALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKT--VDKKIVRTEIGVLLR 104
Query: 874 LHHPKLINLHDAFEDDDEMVLIFE 897
L HP +I L + FE E+ L+ E
Sbjct: 105 LSHPNIIKLKEIFETPTEISLVLE 128
>2q7n_A Leukemia inhibitory factor receptor; cytokine cell surface receptor
complex LIFR LIF, cytokine RE cytokine complex; HET: NAG
FUC MAN; 4.00A {Mus musculus}
Length = 488
Score = 98.1 bits (243), Expect = 6e-21
Identities = 63/510 (12%), Positives = 133/510 (26%), Gaps = 81/510 (15%)
Query: 901 RPHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTKVSSYVTTPFV 960
+ ++L W P + + ++ + ++ + +
Sbjct: 3 KDDDDKDLKCTTNNMRVWDCTWPAPLGVSPGTVKDICIKDRFHSCHPLETTNVKIPAL-- 60
Query: 961 RVRNLAIGSTYEFRVMAENQYGLSKPALTIDPIKAKHPFDVPGAPGAPKGV----DSTED 1016
+E + N + + DV P P+ + D
Sbjct: 61 ------SPGDHEVTINYLNGFQSKFTL---------NEKDVSLIPETPEILDLSADFFTS 105
Query: 1017 SISLVWSKPR--HDGGSPIQRYIVEKRLISDDKWIK---ASMAHIPDTSLKYVLWVSEGK 1071
S+ L W+ S + ++ + + + ++++ W S+
Sbjct: 106 SLLLKWNDRGSALPHPSNAT-WEIKVLQNPRTEPVALVLLNTMLSGKDTVQHWNWTSD-- 162
Query: 1072 SIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPWSSSSDIIMCCAP 1131
L L + I++ + +G WS S +
Sbjct: 163 ------------LPLQCATHSVSIRWHIDSPHF---------SGYKEWSDWSPLKN---I 198
Query: 1132 PCAPKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQ 1191
+++ +D VLAG TI + I + G+ N
Sbjct: 199 SWIRNTETNVFPQDKVVLAGSNMTICCMSPTKVLSGQIGNTLRPLIHLYGQTVAIHILNI 258
Query: 1192 TIYRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYVVDKPSPPQGPLDVSDITPESCSL- 1250
+ N N + VV PP P +S T + +
Sbjct: 259 PVSENSG--------------TNIIFITDDDVYGTVVFAGYPPDVPQKLSCETHDLKEII 304
Query: 1251 -SWKPPLDDG--GSPITNYVVEKYESATGFWSKLSSFV--RSPAYDVFGLETNRQYRFRV 1305
SW P G G T Y + + S + + V + F +
Sbjct: 305 CSWNPGRITGLVGPRNTEYTLFESISGKSAVFHRIEGLTNETYRLGVQMHPGQEIHNFTL 364
Query: 1306 RAENQYGVSEPLELDNSITAKFPFTVP-DPPGQPQIVDWDTNNATLMWDRPRTDGGSKIQ 1364
N G ++ ++ V P ++ D ++ T W P +
Sbjct: 365 TGRNPLGQAQS-----AVVINVTERVAPHDPTSLKVKDINSTVVTFSWYLPGNFTKINLL 419
Query: 1365 GYKMLLKTPTGELPTTIWSKIRPTSSTVYC 1394
++ + + + IR + Y
Sbjct: 420 -CQIEICKANSKKEVRNAT-IRGAEDSTYH 447
Score = 80.8 bits (198), Expect = 2e-15
Identities = 66/515 (12%), Positives = 135/515 (26%), Gaps = 56/515 (10%)
Query: 277 PGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHDTTF 336
L + W P V ++ R S T
Sbjct: 4 DDDDKD-LKCTTNNMRVWDCTWPAPLGVSPGTVKDICIKDRFHS-------CHPLETTNV 55
Query: 337 IVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPP-GIPVVTQVGGDFVN 395
+ L+ G ++ + +N L K P P + + +
Sbjct: 56 KIPALSPG-DHEVTINYLNGFQSKFTLN------EKDVSLIPETPEILDLSADFFTSSLL 108
Query: 396 LSWDKPLDDGGSRIQGYW---IDKHEVGSDAWQRVNVAICAPS------QINIPNLIEGR 446
L W+ W + ++ + + + ++
Sbjct: 109 LKWNDRGSALPHPSNATWEIKVLQNPRTEPVALVLLNTMLSGKDTVQHWNWTSDLPLQCA 168
Query: 447 QYEFRV-YAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTIT 505
+ + + + S S+ +K+ + E V ++ + N C
Sbjct: 169 THSVSIRWHIDSPHFSGYKEWSDWSPLKNISWIRNTETNVFPQDKVVLAGSNMTICCMSP 228
Query: 506 GCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTK 565
I H++ + ++ V + + +
Sbjct: 229 TKVLSGQIGNTLRPLI------HLYGQTVAIHILNIPVSENSGTNIIFI-TDDDVYGTVV 281
Query: 566 AELIIMTAPKFNVPPRFRDTAYFDKGENVVV---KIPFTGYPKPKITWYRDNEVIESGG- 621
P+ + + + ++ TG P+ T Y E I
Sbjct: 282 FAGYPPDVPQ-KL------SCETHDLKEIICSWNPGRITGLVGPRNTEYTLFESISGKSA 334
Query: 622 --HFHVETSERHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQISDR--PDPPQFPT 677
H + L ++ + + + N LG + V I +++R P P
Sbjct: 335 VFHRIEGLTNETYRLGVQMHPGQEIHNFTLTGRNPLGQAQSAVVINVTERVAPHDPTSLK 394
Query: 678 VEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSW-----IRVGNTRFTTMAITGL 732
V+DI + W P N+ +E + IR +A+ L
Sbjct: 395 VKDINSTVVTFSWYLPGNFTKINLL-CQIEICKANSKKEVRNATIRGAEDSTYHVAVDKL 453
Query: 733 SPGHQYEFRVYA--ENVYGRSDPSTTSDLITTKDT 765
+P Y FRV + + S S +TT+ T
Sbjct: 454 NPYTAYTFRVRCSSKTFWKWSRWSDEKRHLTTEAT 488
Score = 76.9 bits (188), Expect = 3e-14
Identities = 72/472 (15%), Positives = 129/472 (27%), Gaps = 64/472 (13%)
Query: 1641 WLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPSICTTPVKICEFVGGEKPDF 1700
+ C+ L+ D+E I +N +F EK
Sbjct: 44 FHSCHPLETTNVKIPALSP---GDHEVTINYLNGFQ-------------SKFTLNEKDVS 87
Query: 1701 IVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARY-------RVETAGGVF 1753
++P P L L + + + +W G + + + V
Sbjct: 88 LIPET----PEI--LDLSADFFTSSL-LLKWNDRGSALPHPSNATWEIKVLQNPRTEPVA 140
Query: 1754 RLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIF 1813
+ N + + + + + V I E +
Sbjct: 141 LVLLNTMLSGKDTVQHWNWTSDLPLQCATHSVSIRWHIDSPHFSGY---KEWSDWSPLKN 197
Query: 1814 YAGDQPMEVSLTKNGRVVQSDDRFKFT------VLDDYIIIFIKEIRKEDAGDYTVNLSN 1867
+ + E ++ +VV + VL I ++ + +++ N
Sbjct: 198 ISWIRNTETNVFPQDKVVLAGSNMTICCMSPTKVLSGQIGNTLRPLIHLYGQTVAIHILN 257
Query: 1868 SSGS-VSGTFTINITG---------LPGPPIGPLDVSEITK--HTCTLHWNPPKYDG--G 1913
S SGT I IT PP P +S T WNP + G G
Sbjct: 258 IPVSENSGTNIIFITDDDVYGTVVFAGYPPDVPQKLSCETHDLKEIICSWNPGRITGLVG 317
Query: 1914 LKVTHYVVERRDISMPHWICISTTCHDTTF--IVQGLTEGQEYLFHVMAVNENGMGPPLE 1971
+ T Y + + T+ VQ + + F + N G
Sbjct: 318 PRNTEYTLFESISGKSAVFHRIEGLTNETYRLGVQMHPGQEIHNFTLTGRNPLGQAQSAV 377
Query: 1972 GINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAW 2031
IN + P P V + V SW P + + I+ + S
Sbjct: 378 VINVTE----RVAPHDPTSLKVKDINSTVVTFSWYLPGNFTKINLL-CQIEICKANSKKE 432
Query: 2032 QR---VNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIK 2080
R + A + + + L Y FRV ++ S S+ +
Sbjct: 433 VRNATIRGAEDSTYHVAVDKLNPYTAYTFRVRCSSK-TFWKWSRWSDEKRHL 483
Score = 63.1 bits (152), Expect = 7e-10
Identities = 62/420 (14%), Positives = 120/420 (28%), Gaps = 58/420 (13%)
Query: 902 PHPPENLHAD-EFAGDSLTLYWTPPR---DNGGSEITNYVVEKKDYNSTVWTKVSSYVTT 957
P PE L +F SL L W + + V + V + + + +
Sbjct: 90 PETPEILDLSADFFTSSLLLKWNDRGSALPHPSNATWEIKVLQNPRTEPVALVLLNTMLS 149
Query: 958 PFVRVRNLAIGSTYEFRVMAENQYGLSKPALTIDPIKAKHPFDVPGAPGAPKGVDSTEDS 1017
V++ S + + D P G + D
Sbjct: 150 GKDTVQHWNWTSDLPL-------------QCATHSVSIRWHIDSPHFSGYKEWSD----- 191
Query: 1018 ISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIK----ASMAHIPDTSLKYVLWVSEGKSI 1073
WS ++ V DK + ++ + T + + + +
Sbjct: 192 ----WSPLKNISWIRNTETNVFP----QDKVVLAGSNMTICCMSPTKVLSGQIGNTLRPL 243
Query: 1074 GSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPWSSSSDIIMCCAPPC 1133
G T L + N T++I + + V P + C
Sbjct: 244 IHLYGQTVAIHILNIPVSENSGTNIIFITDDD--VYGTVVFAGYPPDVPQKLS--CETHD 299
Query: 1134 APKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQTI 1193
+I + +T L G T F + ++ + R+ + Q I
Sbjct: 300 LKEIICSWNPGRITGLVGPRNTEYTLFESISGKSAVFHRIEGLTNETYRLGVQMHPGQEI 359
Query: 1194 YRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYVVD--KPSPPQGPLDVSDITPESCSLS 1251
+ ++T+ N +G ++ + V + P P L V DI + S
Sbjct: 360 H------------NFTLTGRNPLGQAQSAVVINVTERVAPHDPTS-LKVKDINSTVVTFS 406
Query: 1252 WKPPLDDGGSPITNYVVEKYESATGFWSKLSSFVRSPA----YDVFGLETNRQYRFRVRA 1307
W P + + +E ++ + + ++ + V L Y FRVR
Sbjct: 407 WYLPGNFTKINLL-CQIEICKANSKKEVRNATIRGAEDSTYHVAVDKLNPYTAYTFRVRC 465
Score = 56.5 bits (135), Expect = 6e-08
Identities = 37/328 (11%), Positives = 88/328 (26%), Gaps = 28/328 (8%)
Query: 38 NDYNVLECSFSVLNLVEGNDYEFRI-IAVNAIGKSEPSICTTPVKICEFVGGEKPDFIVP 96
V +++ ++ + I +++ S + + + V
Sbjct: 150 GKDTVQHWNWTSDLPLQCATHSVSIRWHIDSPHFSGYKEWSDWSPLKNISWIRNTETNVF 209
Query: 97 LKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDV 156
+D VV G +T+ C + + I + + + +
Sbjct: 210 PQDKVVLAGSNMTICCMSPTKVLSGQIGNTLRPLIHLYGQ----------TVAIHILNIP 259
Query: 157 DNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDR-----MPNALYI----PEGDNTKVKIFY 207
+ + + V G PP + + + I G T +
Sbjct: 260 VSENSGTNIIFITDDDVYGTVVFAGYPPDVPQKLSCETHDLKEIICSWNPGRITGLVGPR 319
Query: 208 AGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSG 267
+ + S++ V + + ++ + ++ ++ ++T+ N G
Sbjct: 320 NTEYTLFESISGKSAVFHRIE----GLTNETYRLGVQMHPGQEIHNFTLTGRNPLGQAQS 375
Query: 268 TFTINITG-LPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVT---HYVVERRDISMPH 323
IN+T + L V +I T W P + + + +
Sbjct: 376 AVVINVTERVAPHDPTSLKVKDINSTVVTFSWYLPGNFTKINLLCQIEICKANSKKEVRN 435
Query: 324 WICISTTCHDTTFIVQGLTEGQEYLFHV 351
V L Y F V
Sbjct: 436 ATIRGAEDSTYHVAVDKLNPYTAYTFRV 463
Score = 53.0 bits (126), Expect = 8e-07
Identities = 59/475 (12%), Positives = 117/475 (24%), Gaps = 84/475 (17%)
Query: 669 RPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSWIRVGNTRFTTMA 728
+ D + W AP+ + + ++ R H T +
Sbjct: 3 KDDDDKDLKCTTNNMRVWDCTWPAPLGVSPGTVKDICIKDRFHS------CHPLETTNVK 56
Query: 729 ITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKDTFKKQIKKRQYDFDETGKKIRGKA 788
I LSPG +E + N + D+ +T +I DF + + K
Sbjct: 57 IPALSPGD-HEVTINYLNGFQSKFTLNEKDVSLIPET--PEILDLSADFFTSSLLL--KW 111
Query: 789 DEKVSDYDQYVFDIYSKYVPQPVDIKTSSVYDHYDILEEIGTGAFGVVHRCRERKTGNIF 848
+++ S + V Q + ++ +L T
Sbjct: 112 NDRGSALPHPSNATWEIKVLQNPRTEPVALVLLNTMLSGKDTVQHWNWTSD--------- 162
Query: 849 AAKFIPVSHNLEKELIRKEIDIMNQLHHPKLINLHDAFEDDDEMVLIFEVLDRPHPPENL 908
+P+ IR ID K + ++ + E P L
Sbjct: 163 ----LPLQCATHSVSIRWHID-SPHFSGYKEWSDWSPLKNISWIR-NTETNVFPQDKVVL 216
Query: 909 HADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTKVSSYVTTPFVRVRNLAIG 968
G ++T+ P +I N T+ + Y T + + N+ +
Sbjct: 217 A-----GSNMTICCMSPTKVLSGQIGN----------TLRPLIHLYGQTVAIHILNIPVS 261
Query: 969 STYEFRVMAENQYGLSKPALTIDPIKAKHPFDVPGAPGAPKGVDSTEDSISLVWSKPRHD 1028
++ + + P P I W+ R
Sbjct: 262 ENSGTNIIFITDDDVYGTVVFAG--------YPPDVPQKLSCETHDLKEIICSWNPGRIT 313
Query: 1029 G--GSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEGKSIGSERGSTAQFLEL 1086
G G Y + + + +T V +
Sbjct: 314 GLVGPRNTEYTLFESISGKSAVFHRIEGLTNETYRLGVQMHPGQE--------------- 358
Query: 1087 LLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPWSSSSDI--IMCCAPPCAPKITS 1139
+ F + N GQ + ++ + P + K+
Sbjct: 359 ----------------IHNFTLTGRNPLGQAQSAVVINVTERVAPHDPTSLKVKD 397
Score = 51.1 bits (121), Expect = 3e-06
Identities = 49/398 (12%), Positives = 101/398 (25%), Gaps = 34/398 (8%)
Query: 377 KPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQ 436
K T + +W PL ++ I + NV
Sbjct: 3 KDDDDKDLKCTTNNMRVWDCTWPAPLGVSPGTVKDICIKDRFHSCHPLETTNVK------ 56
Query: 437 INIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRN------- 489
IP L G +E + N + + I + +
Sbjct: 57 --IPALSPGD-HEVTINYLNGFQSKFTLNEKDVSLIPETPEILDLSADFFTSSLLLKWND 113
Query: 490 ANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDAD 549
+ H + I P + T + + + + + A
Sbjct: 114 RGSALPHPSNATWEIKVLQNPRTEPVALVLLNTMLSG----KDTVQHWNWTSDLPLQCAT 169
Query: 550 EYV-CRAVNKGGVKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGY--PKP 606
V R S E + K R +T F + + V+ T
Sbjct: 170 HSVSIRWHIDSPHFSGYKEWSDWSPLKNISWIRNTETNVFPQDKVVLAGSNMTICCMSPT 229
Query: 607 KITWYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQI 666
K+ + + H + +T + I + + + ++ D + +
Sbjct: 230 KVLSGQIGNTLRPLIHLYGQTV----AIHILNIPVSENSGTNIIFITDDDVYG--TVVFA 283
Query: 667 SDRPDPPQFPTVEDIGHDSLALVWRAPIWDG--GSNITNYIVEKR---EHPMSSWIRVGN 721
PD PQ + E + W G G T Y + + + + I
Sbjct: 284 GYPPDVPQKLSCETHDLKEIICSWNPGRITGLVGPRNTEYTLFESISGKSAVFHRIEGLT 343
Query: 722 TRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDL 759
+ + + F + N G++ + ++
Sbjct: 344 NETYRLGVQMHPGQEIHNFTLTGRNPLGQAQSAVVINV 381
Score = 44.9 bits (105), Expect = 2e-04
Identities = 17/79 (21%), Positives = 27/79 (34%), Gaps = 5/79 (6%)
Query: 901 RPHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTKVSSYVTTPF- 959
PH P +L + +T W P + + +E NS + ++
Sbjct: 386 APHDPTSLKVKDINSTVVTFSWYLPGNFTKINLL-CQIEICKANSKKEVRNATIRGAEDS 444
Query: 960 ---VRVRNLAIGSTYEFRV 975
V V L + Y FRV
Sbjct: 445 TYHVAVDKLNPYTAYTFRV 463
Score = 33.0 bits (74), Expect = 1.3
Identities = 15/99 (15%), Positives = 25/99 (25%), Gaps = 9/99 (9%)
Query: 1984 KPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQ 2043
K T + +W PL ++ I + NV
Sbjct: 3 KDDDDKDLKCTTNNMRVWDCTWPAPLGVSPGTVKDICIKDRFHSCHPLETTNVK------ 56
Query: 2044 INIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDP 2082
IP L G +E + N + + I +
Sbjct: 57 --IPALSPGD-HEVTINYLNGFQSKFTLNEKDVSLIPET 92
Score = 33.0 bits (74), Expect = 1.3
Identities = 7/62 (11%), Positives = 22/62 (35%), Gaps = 1/62 (1%)
Query: 22 YIIERREVGGAIWLKCNDYNVLECSFSVLNLVEGND-YEFRIIAVNAIGKSEPSICTTPV 80
Y + G + + E + + G + + F + N +G+++ ++
Sbjct: 323 YTLFESISGKSAVFHRIEGLTNETYRLGVQMHPGQEIHNFTLTGRNPLGQAQSAVVINVT 382
Query: 81 KI 82
+
Sbjct: 383 ER 384
Score = 31.1 bits (69), Expect = 4.7
Identities = 29/230 (12%), Positives = 61/230 (26%), Gaps = 21/230 (9%)
Query: 245 EIRKEDAGDY--TVNLSNSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPK 302
+I GD+ T+N N S +++ +P P ++ + L WN
Sbjct: 56 KIPALSPGDHEVTINYLNGFQSKFTLNEKDVSLIPETPEILDLSADFFTSSLLLKWNDRG 115
Query: 303 --YDGGLKVTH--YVVERRDISMPHWICISTTCHDTTFIVQGLTEGQ---EYLFHVMAVN 355
T V++ + ++T + + H +++
Sbjct: 116 SALPHPSNATWEIKVLQNPRTEPVALVLLNTMLSGKDTVQHWNWTSDLPLQCATHSVSIR 175
Query: 356 ENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWID 415
+ P G SP S N+ + GS + +
Sbjct: 176 WHIDSPHFSGYKEWSDWSPLKNISWIRNTE--------TNVFPQDKVVLAGSNMTICCMS 227
Query: 416 KHEVGSDAWQRVNVAIC----APSQINIPNLIEGRQYEFRVYAQNEAGLS 461
+V S + I+I N+ + + +
Sbjct: 228 PTKVLSGQIGNTLRPLIHLYGQTVAIHILNIPVSENSGTNIIFITDDDVY 277
Score = 31.1 bits (69), Expect = 5.2
Identities = 7/58 (12%), Positives = 21/58 (36%), Gaps = 1/58 (1%)
Query: 1633 EREVGGAIWLKCNDYNVLECSFSVLNLVEGND-YEFRIIAVNAIGKSEPSICTTPVKI 1689
E G + + E + + G + + F + N +G+++ ++ +
Sbjct: 327 ESISGKSAVFHRIEGLTNETYRLGVQMHPGQEIHNFTLTGRNPLGQAQSAVVINVTER 384
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane,
glycoprotein, signal, complex (immunoglobulin/receptor);
2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB:
1ira_Y* 4dep_B* 1g0y_R
Length = 315
Score = 94.8 bits (235), Expect = 8e-21
Identities = 38/239 (15%), Positives = 66/239 (27%), Gaps = 33/239 (13%)
Query: 454 AQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQC------TITGC 507
+N + L S +P + I + + C
Sbjct: 81 VRNSSY-CLRIKISAKFVENEPNLCYNAQAIFKQK---LPVAGDGGLVCPYMEFFKNENN 136
Query: 508 PKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKS---T 564
P + W K + + H + LI+ +V Y C A K T
Sbjct: 137 ELPKLQWYKDCKPLLLDNIHFSGVKD---RLIVMNVAEKHRGNYTCHASYTYLGKQYPIT 193
Query: 565 KAELIIMTAPKFNVPPRF----RDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESG 620
+ I P +T D G + + TG W + VI+
Sbjct: 194 RVIEFITLEENKPTRPVIVSPANETMEVDLGSQIQLICNVTGQLSDIAYWKWNGSVIDED 253
Query: 621 GHFHVE------------TSERHAILTIRDASNVDTA-PYRVVAENDLGMDSAIVKIQI 666
E S +L I + + P+ A+N G+D+A +++
Sbjct: 254 DPVLGEDYYSVENPANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHGIDAAYIQLIY 312
Score = 90.2 bits (223), Expect = 3e-19
Identities = 26/194 (13%), Positives = 47/194 (24%), Gaps = 21/194 (10%)
Query: 498 AQFQCTITGCP-KPTISWLK--GSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCR 554
C + K TI+W K ++ I + L D+ Y C
Sbjct: 23 DVRPCPLNPNEHKGTITWYKDDSKTPVSTEQASRIHQHKE--KLWFVPAKVEDSGHYYCV 80
Query: 555 AVNKGGVKSTKAEL-IIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFT------GYPKPK 607
N K + P + + + P+ PK
Sbjct: 81 VRNSSYCLRIKISAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPK 140
Query: 608 ITWYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAPYRVVAENDLGMDS------AI 661
+ WY+D + + +R L + + + Y A
Sbjct: 141 LQWYKDCKPLLLDNIHFSGVKDR---LIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIE 197
Query: 662 VKIQISDRPDPPQF 675
++P P
Sbjct: 198 FITLEENKPTRPVI 211
Score = 84.4 bits (208), Expect = 3e-17
Identities = 27/192 (14%), Positives = 58/192 (30%), Gaps = 18/192 (9%)
Query: 96 PLKDLVVPLGKLLTLQCEATGTPVPKC-RWLRNGRE--ISSGARYRVETAGGVFRLHFNE 152
LV ++ C W ++ + +S+ R+ L F
Sbjct: 11 EKIILVSSANEIDVRPCPLNPNEHKGTITWYKDDSKTPVSTEQASRIHQHKEK--LWFVP 68
Query: 153 VTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPR----IDRMPNALYIPEGDNTKVK---- 204
D+G Y C NS K + +P + +
Sbjct: 69 AKVEDSGHYYCVVRNSSYCLRIKISAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYM 128
Query: 205 --IFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSS 262
++ ++ K+ + + D+ F+ + D +I + + ++ G+YT + S +
Sbjct: 129 EFFKNENNELPKLQWYKDCKPLLLDNI-HFSGVKDRLI--VMNVAEKHRGNYTCHASYTY 185
Query: 263 GSVSGTFTINIT 274
T I
Sbjct: 186 LGKQYPITRVIE 197
Score = 84.4 bits (208), Expect = 3e-17
Identities = 27/192 (14%), Positives = 58/192 (30%), Gaps = 18/192 (9%)
Query: 1703 PLKDLVVPLGKLLTLQCEATGTPVPKC-RWLRNGRE--ISSGARYRVETAGGVFRLHFNE 1759
LV ++ C W ++ + +S+ R+ L F
Sbjct: 11 EKIILVSSANEIDVRPCPLNPNEHKGTITWYKDDSKTPVSTEQASRIHQHKEK--LWFVP 68
Query: 1760 VTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPR----IDRMPNALYIPEGDNTKVK---- 1811
D+G Y C NS K + +P + +
Sbjct: 69 AKVEDSGHYYCVVRNSSYCLRIKISAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYM 128
Query: 1812 --IFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSS 1869
++ ++ K+ + + D+ F+ + D +I + + ++ G+YT + S +
Sbjct: 129 EFFKNENNELPKLQWYKDCKPLLLDNI-HFSGVKDRLI--VMNVAEKHRGNYTCHASYTY 185
Query: 1870 GSVSGTFTINIT 1881
T I
Sbjct: 186 LGKQYPITRVIE 197
Score = 77.1 bits (189), Expect = 8e-15
Identities = 35/240 (14%), Positives = 65/240 (27%), Gaps = 42/240 (17%)
Query: 63 IAVNAIGKSEPSICTTPVKICEFVGGEKPDFIVPLKDL---VVPLGKLLTLQC------E 113
+ N+ I V+ +P+ + + +P+ L C +
Sbjct: 80 VVRNSSYCLRIKISAKFVE-------NEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFK 132
Query: 114 ATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAH 173
+PK +W ++ + + + RL V + G+YTC A +
Sbjct: 133 NENNELPKLQWYKDCKPLLLDNIHFSGVKD---RLIVMNVAEKHRGNYTCHASYTYLGKQ 189
Query: 174 TSSRVKI---------GTPPRIDR-MPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRV 223
I T P I + + G ++ G NG V
Sbjct: 190 YPITRVIEFITLEENKPTRPVIVSPANETMEVDLGSQIQLICNVTGQLSDIAYWKWNGSV 249
Query: 224 VQSDDRF------------KFTVLDDYIIIFIKEIRKED-AGDYTVNLSNSSGSVSGTFT 270
+ DD ++ I EI +T N+ G +
Sbjct: 250 IDEDDPVLGEDYYSVENPANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHGIDAAYIQ 309
Score = 77.1 bits (189), Expect = 8e-15
Identities = 35/240 (14%), Positives = 65/240 (27%), Gaps = 42/240 (17%)
Query: 1670 IAVNAIGKSEPSICTTPVKICEFVGGEKPDFIVPLKDL---VVPLGKLLTLQC------E 1720
+ N+ I V+ +P+ + + +P+ L C +
Sbjct: 80 VVRNSSYCLRIKISAKFVE-------NEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFK 132
Query: 1721 ATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAH 1780
+PK +W ++ + + + RL V + G+YTC A +
Sbjct: 133 NENNELPKLQWYKDCKPLLLDNIHFSGVKD---RLIVMNVAEKHRGNYTCHASYTYLGKQ 189
Query: 1781 TSSRVKI---------GTPPRIDR-MPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRV 1830
I T P I + + G ++ G NG V
Sbjct: 190 YPITRVIEFITLEENKPTRPVIVSPANETMEVDLGSQIQLICNVTGQLSDIAYWKWNGSV 249
Query: 1831 VQSDDRF------------KFTVLDDYIIIFIKEIRKED-AGDYTVNLSNSSGSVSGTFT 1877
+ DD ++ I EI +T N+ G +
Sbjct: 250 IDEDDPVLGEDYYSVENPANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHGIDAAYIQ 309
Score = 72.4 bits (177), Expect = 2e-13
Identities = 24/133 (18%), Positives = 39/133 (29%), Gaps = 15/133 (11%)
Query: 63 IAVNAIGKSEPSIC-TTPVKICEFVGGEKPDFIVPLKDLV-VPLGKLLTLQCEATGTPVP 120
A + I E +P + P + + V LG + L C TG
Sbjct: 180 HASYTYLGKQYPITRVIEFITLEENKPTRPVIVSPANETMEVDLGSQIQLICNVTGQLSD 239
Query: 121 KCRWLRNGREISSGARYRVE------------TAGGVFRLHFNEVTDVD-NGDYTCEAYN 167
W NG I E + + L+ +E+ +TC A N
Sbjct: 240 IAYWKWNGSVIDEDDPVLGEDYYSVENPANKRRSTLITVLNISEIESRFYKHPFTCFAKN 299
Query: 168 SVGFAHTSSRVKI 180
+ G ++
Sbjct: 300 THGIDAAYIQLIY 312
Score = 72.4 bits (177), Expect = 2e-13
Identities = 24/133 (18%), Positives = 39/133 (29%), Gaps = 15/133 (11%)
Query: 1670 IAVNAIGKSEPSIC-TTPVKICEFVGGEKPDFIVPLKDLV-VPLGKLLTLQCEATGTPVP 1727
A + I E +P + P + + V LG + L C TG
Sbjct: 180 HASYTYLGKQYPITRVIEFITLEENKPTRPVIVSPANETMEVDLGSQIQLICNVTGQLSD 239
Query: 1728 KCRWLRNGREISSGARYRVE------------TAGGVFRLHFNEVTDVD-NGDYTCEAYN 1774
W NG I E + + L+ +E+ +TC A N
Sbjct: 240 IAYWKWNGSVIDEDDPVLGEDYYSVENPANKRRSTLITVLNISEIESRFYKHPFTCFAKN 299
Query: 1775 SVGFAHTSSRVKI 1787
+ G ++
Sbjct: 300 THGIDAAYIQLIY 312
Score = 64.7 bits (157), Expect = 7e-11
Identities = 19/132 (14%), Positives = 29/132 (21%), Gaps = 15/132 (11%)
Query: 2061 AQNEAG-LSLPSSASNSVQIKDPMAAKAPEIIVPLRN-ANAIQNHNAQFQCTITGCPKPT 2118
A P + + P I+ P Q C +TG
Sbjct: 181 ASYTYLGKQYPITRVIEFITLEENKPTRPVIVSPANETMEVDLGSQIQLICNVTGQLSDI 240
Query: 2119 ISWLKGSREITPSARHHIF------------AEGDTYTLIINSVYGVD-ADEYVCRAVNK 2165
W I L I+ + + C A N
Sbjct: 241 AYWKWNGSVIDEDDPVLGEDYYSVENPANKRRSTLITVLNISEIESRFYKHPFTCFAKNT 300
Query: 2166 GGVKSTKAELII 2177
G+ + +LI
Sbjct: 301 HGIDAAYIQLIY 312
Score = 57.0 bits (137), Expect = 2e-08
Identities = 20/138 (14%), Positives = 33/138 (23%), Gaps = 16/138 (11%)
Query: 2061 AQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQC------TITGC 2114
+N + L S +P + I + + C
Sbjct: 81 VRNSSY-CLRIKISAKFVENEPNLCYNAQAIFKQK---LPVAGDGGLVCPYMEFFKNENN 136
Query: 2115 PKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKS---T 2171
P + W K + + H + LI+ +V Y C A K T
Sbjct: 137 ELPKLQWYKDCKPLLLDNIHFSGVKD---RLIVMNVAEKHRGNYTCHASYTYLGKQYPIT 193
Query: 2172 KAELIIMTAPKFNVPPRF 2189
+ I P
Sbjct: 194 RVIEFITLEENKPTRPVI 211
Score = 54.0 bits (129), Expect = 3e-07
Identities = 16/105 (15%), Positives = 26/105 (24%), Gaps = 7/105 (6%)
Query: 2105 AQFQCTITGCP-KPTISWLK--GSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCR 2161
C + K TI+W K ++ I + L D+ Y C
Sbjct: 23 DVRPCPLNPNEHKGTITWYKDDSKTPVSTEQASRIHQHKE--KLWFVPAKVEDSGHYYCV 80
Query: 2162 AVNKGGVKSTKAEL-IIMTAPKFNVPPRFR-DTAYFESDVVVVVC 2204
N K + P + + +VC
Sbjct: 81 VRNSSYCLRIKISAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVC 125
Score = 47.4 bits (112), Expect = 3e-05
Identities = 15/87 (17%), Positives = 23/87 (26%), Gaps = 1/87 (1%)
Query: 591 GENVVVKIPFTGYP-KPKITWYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAPYRV 649
E V P K ITWY+D+ + L A D+ Y
Sbjct: 20 NEIDVRPCPLNPNEHKGTITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYC 79
Query: 650 VAENDLGMDSAIVKIQISDRPDPPQFP 676
V N + + + +
Sbjct: 80 VVRNSSYCLRIKISAKFVENEPNLCYN 106
Score = 46.3 bits (109), Expect = 7e-05
Identities = 29/177 (16%), Positives = 53/177 (29%), Gaps = 28/177 (15%)
Query: 1064 VLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHE--YEFRVC-AVNAAGQGPWS 1120
+ W + K + + + + L++ ++ E H Y C A +
Sbjct: 141 LQWYKDCKPLLLDNIHFSGVKDRLIV------MNVAEKHRGNY---TCHASYTYLGKQYP 191
Query: 1121 SSSDI---IMCCAPPCAPKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEV 1177
+ I + P P I S + M V G + + +G+ W NG +
Sbjct: 192 ITRVIEFITLEENKPTRPVIVSPAN-ETMEVDLGSQIQLICNVTGQLSDIAYWKWNGSVI 250
Query: 1178 SPDGRIKFETSENQTIYRN------------KSAKRATDSGSYTIQLVNTVGSDSAS 1222
D + E + N + +T NT G D+A
Sbjct: 251 DEDDPVLGEDYYSVENPANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHGIDAAY 307
Score = 45.9 bits (108), Expect = 9e-05
Identities = 16/136 (11%), Positives = 32/136 (23%), Gaps = 14/136 (10%)
Query: 1408 KQSGPVIVEEQPNKPVMDLSGVRDITVKAGEDFSIHVPFMAF------PQPAAFWFANDS 1461
+ E + + + D + P+M F P W+ +
Sbjct: 89 RIKISAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCK 148
Query: 1462 IIDDSDTRVHKQLTMNSASLVVKNSQRSDGGQYRLQLKNPAGFD----TATLHSRLRTLP 1517
+ + + L+V N G Y T +
Sbjct: 149 PLLLDNIHF----SGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEEN 204
Query: 1518 DSVNPRCHLPSSTSKE 1533
P P++ + E
Sbjct: 205 KPTRPVIVSPANETME 220
Score = 44.3 bits (104), Expect = 3e-04
Identities = 20/108 (18%), Positives = 36/108 (33%), Gaps = 12/108 (11%)
Query: 1413 VIVEEQPNKPVMDLSGVRDITVKAGEDFSIHVPFMAFPQPAAFWFANDSIIDDSDTRV-- 1470
+ E +P +PV+ + V G + A+W N S+ID+ D +
Sbjct: 200 TLEENKPTRPVIVSPANETMEVDLGSQIQLICNVTGQLSDIAYWKWNGSVIDEDDPVLGE 259
Query: 1471 ---------HKQLTMNSASLVVKNSQRSD-GGQYRLQLKNPAGFDTAT 1508
+K+ + L + + + KN G D A
Sbjct: 260 DYYSVENPANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHGIDAAY 307
Score = 42.8 bits (100), Expect = 8e-04
Identities = 17/110 (15%), Positives = 28/110 (25%), Gaps = 12/110 (10%)
Query: 1134 APKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPI-WTVNGDEVSPDGRIKFETSENQT 1192
A K + A E P + I W + + T +
Sbjct: 3 ADKCKEREEKIILVSSANEIDVRPCPLNPNEHKGTITWYKDDSKTPVS------TEQASR 56
Query: 1193 IYRNKSA---KRAT--DSGSYTIQLVNTVGSDSASCKVYVVDKPSPPQGP 1237
I+++K A DSG Y + N+ V+
Sbjct: 57 IHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKFVENEPNLCYN 106
Score = 38.9 bits (90), Expect = 0.015
Identities = 11/107 (10%), Positives = 28/107 (26%), Gaps = 2/107 (1%)
Query: 187 DRMPNALYIPEGDNTKVK--IFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIK 244
+R + + + V+ + ++ K+ + ++
Sbjct: 8 EREEKIILVSSANEIDVRPCPLNPNEHKGTITWYKDDSKTPVSTEQASRIHQHKEKLWFV 67
Query: 245 EIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPIGPLDVSEITK 291
+ ED+G Y + NSS + + K
Sbjct: 68 PAKVEDSGHYYCVVRNSSYCLRIKISAKFVENEPNLCYNAQAIFKQK 114
Score = 38.9 bits (90), Expect = 0.015
Identities = 11/107 (10%), Positives = 28/107 (26%), Gaps = 2/107 (1%)
Query: 1794 DRMPNALYIPEGDNTKVK--IFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIK 1851
+R + + + V+ + ++ K+ + ++
Sbjct: 8 EREEKIILVSSANEIDVRPCPLNPNEHKGTITWYKDDSKTPVSTEQASRIHQHKEKLWFV 67
Query: 1852 EIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPIGPLDVSEITK 1898
+ ED+G Y + NSS + + K
Sbjct: 68 PAKVEDSGHYYCVVRNSSYCLRIKISAKFVENEPNLCYNAQAIFKQK 114
Score = 38.2 bits (88), Expect = 0.029
Identities = 13/138 (9%), Positives = 28/138 (20%), Gaps = 20/138 (14%)
Query: 1110 AVNAAGQGPWSSSSDIIMCCAPPCAPKITSDLSIRDMTVLAGEEFTITVPF------SGR 1163
N++ P + + + + P+
Sbjct: 81 VRNSSYC--LRIKISAKFVENEPNLCYNAQAIF--KQKLPVAGDGGLVCPYMEFFKNENN 136
Query: 1164 PKPTPIWTVNGDEVSPDGRIKFETSENQTIYRNKSAKRATDSGSYTIQLVNTVGSDSASC 1223
P W + + D + + + G+YT T
Sbjct: 137 ELPKLQWYKDCKPLLLDNIHFSGVKDRLIV---MNVAE-KHRGNYTCHASYTYLGKQYPI 192
Query: 1224 ------KVYVVDKPSPPQ 1235
+KP+ P
Sbjct: 193 TRVIEFITLEENKPTRPV 210
Score = 32.8 bits (74), Expect = 1.1
Identities = 13/84 (15%), Positives = 28/84 (33%), Gaps = 8/84 (9%)
Query: 1431 DITVKAGEDFSIHVPFMAFPQPAAF-WFANDS---IIDDSDTRVHKQLTMNSASLVVKNS 1486
+ A E P W+ +DS + + +R+H+ + L +
Sbjct: 14 ILVSSANEIDVRPCPLNPNEHKGTITWYKDDSKTPVSTEQASRIHQ----HKEKLWFVPA 69
Query: 1487 QRSDGGQYRLQLKNPAGFDTATLH 1510
+ D G Y ++N + +
Sbjct: 70 KVEDSGHYYCVVRNSSYCLRIKIS 93
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif,
transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A*
2hw6_A
Length = 316
Score = 94.7 bits (236), Expect = 8e-21
Identities = 23/88 (26%), Positives = 41/88 (46%), Gaps = 2/88 (2%)
Query: 812 DIKTSSVYDHYDILEE-IGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDI 870
D + D Y + E+ +G GA V C T +A K I + + +E+++
Sbjct: 4 DSFSGRFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEM 63
Query: 871 MNQL-HHPKLINLHDAFEDDDEMVLIFE 897
+ Q H ++ L + FE++D L+FE
Sbjct: 64 LYQCQGHRNVLELIEFFEEEDRFYLVFE 91
>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton,
immunoglobulin domain, muscle protein, phosphorylation,
repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A
1tiu_A 2rq8_A
Length = 93
Score = 87.7 bits (218), Expect = 1e-20
Identities = 18/94 (19%), Positives = 32/94 (34%), Gaps = 5/94 (5%)
Query: 477 AAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTY 536
A E+ PL A F+ ++ P W + + S I +G +
Sbjct: 2 AMALIEVEKPLYGVEVFVGETAHFEIELSE-PDVHGQWKLKGQPLAASPDCEIIEDGKKH 60
Query: 537 TLIINSVYGVDADEYVCRAVNKGGVKSTKAELII 570
LI+++ E +A N + A L +
Sbjct: 61 ILILHNCQLGMTGEVSFQAAN----TKSAANLKV 90
Score = 87.7 bits (218), Expect = 1e-20
Identities = 18/94 (19%), Positives = 32/94 (34%), Gaps = 5/94 (5%)
Query: 2084 AAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTY 2143
A E+ PL A F+ ++ P W + + S I +G +
Sbjct: 2 AMALIEVEKPLYGVEVFVGETAHFEIELSE-PDVHGQWKLKGQPLAASPDCEIIEDGKKH 60
Query: 2144 TLIINSVYGVDADEYVCRAVNKGGVKSTKAELII 2177
LI+++ E +A N + A L +
Sbjct: 61 ILILHNCQLGMTGEVSFQAAN----TKSAANLKV 90
Score = 80.8 bits (200), Expect = 2e-18
Identities = 14/84 (16%), Positives = 32/84 (38%), Gaps = 1/84 (1%)
Query: 90 KPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLH 149
+ PL + V +G+ + E + P +W G+ +++ + G L
Sbjct: 5 LIEVEKPLYGVEVFVGETAHFEIELS-EPDVHGQWKLKGQPLAASPDCEIIEDGKKHILI 63
Query: 150 FNEVTDVDNGDYTCEAYNSVGFAH 173
+ G+ + +A N+ A+
Sbjct: 64 LHNCQLGMTGEVSFQAANTKSAAN 87
Score = 80.8 bits (200), Expect = 2e-18
Identities = 14/84 (16%), Positives = 32/84 (38%), Gaps = 1/84 (1%)
Query: 1697 KPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLH 1756
+ PL + V +G+ + E + P +W G+ +++ + G L
Sbjct: 5 LIEVEKPLYGVEVFVGETAHFEIELS-EPDVHGQWKLKGQPLAASPDCEIIEDGKKHILI 63
Query: 1757 FNEVTDVDNGDYTCEAYNSVGFAH 1780
+ G+ + +A N+ A+
Sbjct: 64 LHNCQLGMTGEVSFQAANTKSAAN 87
Score = 55.4 bits (134), Expect = 2e-09
Identities = 12/84 (14%), Positives = 23/84 (27%), Gaps = 4/84 (4%)
Query: 571 MTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSER 630
M + P + GE +I + P W + + + + +
Sbjct: 3 MALIEVEKPLYGVEVF---VGETAHFEIELS-EPDVHGQWKLKGQPLAASPDCEIIEDGK 58
Query: 631 HAILTIRDASNVDTAPYRVVAEND 654
IL + + T A N
Sbjct: 59 KHILILHNCQLGMTGEVSFQAANT 82
Score = 50.4 bits (121), Expect = 1e-07
Identities = 10/101 (9%), Positives = 28/101 (27%), Gaps = 14/101 (13%)
Query: 1130 APPCAPKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSE 1189
++ L + V GE + S P W + G ++ +
Sbjct: 1 GAMALIEVEKPL--YGVEVFVGETAHFEIELS-EPDVHGQWKLKGQPLAASPDCEIIEDG 57
Query: 1190 NQ---TIYRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYV 1227
+ ++ + +G + + ++ + V
Sbjct: 58 KKHILILHN----CQLGMTGEVSF----QAANTKSAANLKV 90
Score = 46.1 bits (110), Expect = 4e-06
Identities = 6/82 (7%), Positives = 26/82 (31%), Gaps = 1/82 (1%)
Query: 183 PPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIF 242
+++ + + G+ +I + G+ + + + I+
Sbjct: 5 LIEVEKPLYGVEVFVGETAHFEIELSEPDV-HGQWKLKGQPLAASPDCEIIEDGKKHILI 63
Query: 243 IKEIRKEDAGDYTVNLSNSSGS 264
+ + G+ + +N+ +
Sbjct: 64 LHNCQLGMTGEVSFQAANTKSA 85
Score = 46.1 bits (110), Expect = 4e-06
Identities = 6/82 (7%), Positives = 26/82 (31%), Gaps = 1/82 (1%)
Query: 1790 PPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIF 1849
+++ + + G+ +I + G+ + + + I+
Sbjct: 5 LIEVEKPLYGVEVFVGETAHFEIELSEPDV-HGQWKLKGQPLAASPDCEIIEDGKKHILI 63
Query: 1850 IKEIRKEDAGDYTVNLSNSSGS 1871
+ + G+ + +N+ +
Sbjct: 64 LHNCQLGMTGEVSFQAANTKSA 85
Score = 38.4 bits (90), Expect = 0.002
Identities = 16/92 (17%), Positives = 25/92 (27%), Gaps = 8/92 (8%)
Query: 1421 KPVMDLSGVRDITVKAGED--FSIHVPFMAFPQPAAFWFANDSIIDDSDTRVHKQLTMNS 1478
+ + + V GE F I + + P W + S
Sbjct: 4 ALIEVEKPLYGVEVFVGETAHFEIEL---SEPDVHGQWKLKGQPLAASP-DCEIIEDGKK 59
Query: 1479 ASLVVKNSQRSDGGQYRLQLKNPAGFDTATLH 1510
L++ N Q G+ Q N A L
Sbjct: 60 HILILHNCQLGMTGEVSFQAANTKS--AANLK 89
>2ch8_A BARF1, P33, 33 kDa early protein; viral protein, immunoglobulin
domain, oncogene; HET: NAG MAN; 2.3A {Epstein-barr
virus}
Length = 201
Score = 91.6 bits (227), Expect = 1e-20
Identities = 24/185 (12%), Positives = 48/185 (25%), Gaps = 24/185 (12%)
Query: 498 AQFQCTITGCPKPTISWLKGSREITP-----------------SARHHIFAEGDTYTLII 540
+ ++ P+ +SW K I +T+ L++
Sbjct: 12 TSYWRRVSLGPEIEVSWFKLGPGEEQVLIGRMHHDVIFIEWPFRGFFDIHRSANTFFLVV 71
Query: 541 NSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPF 600
+ Y+CR + + L ++ +V F + V
Sbjct: 72 TAANISHDGNYLCRMKLGETEVTKQEHLSVVKPLTLSVHSERS---QFPDFSVLTVTCTV 128
Query: 601 TGYPKPKITWYRDNEVIES----GGHFHVETSERHAILTIRDASNVDTAPYRVVAENDLG 656
+P P + W V + G E ++ P V +ND
Sbjct: 129 NAFPHPHVQWLMPEGVEPAPTAANGGVMKEKDGSLSVAVDLSLPKPWHLPVTCVGKNDKE 188
Query: 657 MDSAI 661
+
Sbjct: 189 EAHGV 193
Score = 74.7 bits (183), Expect = 7e-15
Identities = 22/194 (11%), Positives = 41/194 (21%), Gaps = 24/194 (12%)
Query: 100 LVVPLGKLLTLQCEA---TGTPVPKCRWLRNGREISS-----------------GARYRV 139
+ LG+ +TL + P + W + G + +
Sbjct: 1 VTAFLGERVTLTSYWRRVSLGPEIEVSWFKLGPGEEQVLIGRMHHDVIFIEWPFRGFFDI 60
Query: 140 ETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMPNALYIPEGD 199
+ F L +G+Y C + + P + P+
Sbjct: 61 HRSANTFFLVVTAANISHDGNYLCRMKLGETEVTKQEHLSVVKPLTLSVHSERSQFPDFS 120
Query: 200 NTKVKIFYAGDQPMEVSLTKNGRVVQSD--DRFKFTVLDD--YIIIFIKEIRKEDAGDYT 255
V V V + D + + K T
Sbjct: 121 VLTVTCTVNAFPHPHVQWLMPEGVEPAPTAANGGVMKEKDGSLSVAVDLSLPKPWHLPVT 180
Query: 256 VNLSNSSGSVSGTF 269
N G +
Sbjct: 181 CVGKNDKEEAHGVY 194
Score = 74.7 bits (183), Expect = 7e-15
Identities = 22/194 (11%), Positives = 41/194 (21%), Gaps = 24/194 (12%)
Query: 1707 LVVPLGKLLTLQCEA---TGTPVPKCRWLRNGREISS-----------------GARYRV 1746
+ LG+ +TL + P + W + G + +
Sbjct: 1 VTAFLGERVTLTSYWRRVSLGPEIEVSWFKLGPGEEQVLIGRMHHDVIFIEWPFRGFFDI 60
Query: 1747 ETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMPNALYIPEGD 1806
+ F L +G+Y C + + P + P+
Sbjct: 61 HRSANTFFLVVTAANISHDGNYLCRMKLGETEVTKQEHLSVVKPLTLSVHSERSQFPDFS 120
Query: 1807 NTKVKIFYAGDQPMEVSLTKNGRVVQSD--DRFKFTVLDD--YIIIFIKEIRKEDAGDYT 1862
V V V + D + + K T
Sbjct: 121 VLTVTCTVNAFPHPHVQWLMPEGVEPAPTAANGGVMKEKDGSLSVAVDLSLPKPWHLPVT 180
Query: 1863 VNLSNSSGSVSGTF 1876
N G +
Sbjct: 181 CVGKNDKEEAHGVY 194
Score = 71.6 bits (175), Expect = 6e-14
Identities = 16/89 (17%), Positives = 26/89 (29%), Gaps = 4/89 (4%)
Query: 89 EKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREI----SSGARYRVETAGG 144
+ V + P +LT+ C P P +WL ++ E G
Sbjct: 103 KPLTLSVHSERSQFPDFSVLTVTCTVNAFPHPHVQWLMPEGVEPAPTAANGGVMKEKDGS 162
Query: 145 VFRLHFNEVTDVDNGDYTCEAYNSVGFAH 173
+ + + TC N AH
Sbjct: 163 LSVAVDLSLPKPWHLPVTCVGKNDKEEAH 191
Score = 71.6 bits (175), Expect = 6e-14
Identities = 16/89 (17%), Positives = 26/89 (29%), Gaps = 4/89 (4%)
Query: 1696 EKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREI----SSGARYRVETAGG 1751
+ V + P +LT+ C P P +WL ++ E G
Sbjct: 103 KPLTLSVHSERSQFPDFSVLTVTCTVNAFPHPHVQWLMPEGVEPAPTAANGGVMKEKDGS 162
Query: 1752 VFRLHFNEVTDVDNGDYTCEAYNSVGFAH 1780
+ + + TC N AH
Sbjct: 163 LSVAVDLSLPKPWHLPVTCVGKNDKEEAH 191
Score = 60.4 bits (146), Expect = 4e-10
Identities = 11/84 (13%), Positives = 19/84 (22%), Gaps = 4/84 (4%)
Query: 481 PEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREIT----PSARHHIFAEGDTY 536
+ V + CT+ P P + WL + +G
Sbjct: 105 LTLSVHSERSQFPDFSVLTVTCTVNAFPHPHVQWLMPEGVEPAPTAANGGVMKEKDGSLS 164
Query: 537 TLIINSVYGVDADEYVCRAVNKGG 560
+ S+ C N
Sbjct: 165 VAVDLSLPKPWHLPVTCVGKNDKE 188
Score = 60.4 bits (146), Expect = 4e-10
Identities = 11/84 (13%), Positives = 19/84 (22%), Gaps = 4/84 (4%)
Query: 2088 PEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREIT----PSARHHIFAEGDTY 2143
+ V + CT+ P P + WL + +G
Sbjct: 105 LTLSVHSERSQFPDFSVLTVTCTVNAFPHPHVQWLMPEGVEPAPTAANGGVMKEKDGSLS 164
Query: 2144 TLIINSVYGVDADEYVCRAVNKGG 2167
+ S+ C N
Sbjct: 165 VAVDLSLPKPWHLPVTCVGKNDKE 188
Score = 58.9 bits (142), Expect = 2e-09
Identities = 15/117 (12%), Positives = 35/117 (29%), Gaps = 19/117 (16%)
Query: 2105 AQFQCTITGCPKPTISWLKGSREITP-----------------SARHHIFAEGDTYTLII 2147
+ ++ P+ +SW K I +T+ L++
Sbjct: 12 TSYWRRVSLGPEIEVSWFKLGPGEEQVLIGRMHHDVIFIEWPFRGFFDIHRSANTFFLVV 71
Query: 2148 NSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPRFRDTAYFESDVVVVVC 2204
+ Y+CR + + L ++ +V + + + V+ V C
Sbjct: 72 TAANISHDGNYLCRMKLGETEVTKQEHLSVVKPLTLSVHS--ERSQFPDFSVLTVTC 126
Score = 38.5 bits (89), Expect = 0.011
Identities = 16/90 (17%), Positives = 26/90 (28%), Gaps = 8/90 (8%)
Query: 1144 RDMTVLAGEEFTITVPFSGRPKPTPIWTV-NGDEVSP---DGRIKFETSENQTIYRNKSA 1199
T+T + P P W + G E +P +G + E + ++ + S
Sbjct: 112 ERSQFPDFSVLTVTCTVNAFPHPHVQWLMPEGVEPAPTAANGGVMKEKDGSLSVAVDLSL 171
Query: 1200 KRATDSGSYTIQLVNTVGSDSASCKVYVVD 1229
T N VYV
Sbjct: 172 -PKPWHLPVTCVGKNDKEEAHG---VYVSG 197
Score = 38.1 bits (88), Expect = 0.015
Identities = 18/114 (15%), Positives = 33/114 (28%), Gaps = 19/114 (16%)
Query: 1147 TVLAGEEFTIT---VPFSGRPKPTPIWTVNG--DEVSPDGRIKFET-------SENQTIY 1194
T GE T+T S P+ W G +E GR+ + I+
Sbjct: 2 TAFLGERVTLTSYWRRVSLGPEIEVSWFKLGPGEEQVLIGRMHHDVIFIEWPFRGFFDIH 61
Query: 1195 RNKSAK-------RATDSGSYTIQLVNTVGSDSASCKVYVVDKPSPPQGPLDVS 1241
R+ + + G+Y ++ + + VV +
Sbjct: 62 RSANTFFLVVTAANISHDGNYLCRMKLGETEVTKQEHLSVVKPLTLSVHSERSQ 115
Score = 37.3 bits (86), Expect = 0.030
Identities = 10/77 (12%), Positives = 21/77 (27%), Gaps = 3/77 (3%)
Query: 1430 RDITVKAGEDFSIHVPFMAFPQPAAFWFANDSIID---DSDTRVHKQLTMNSASLVVKNS 1486
++ AFP P W + + ++ V K+ + + V +
Sbjct: 112 ERSQFPDFSVLTVTCTVNAFPHPHVQWLMPEGVEPAPTAANGGVMKEKDGSLSVAVDLSL 171
Query: 1487 QRSDGGQYRLQLKNPAG 1503
+ KN
Sbjct: 172 PKPWHLPVTCVGKNDKE 188
Score = 31.2 bits (70), Expect = 2.7
Identities = 4/55 (7%), Positives = 13/55 (23%)
Query: 243 IKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLH 297
+ G+Y + V+ +++ + T+
Sbjct: 71 VTAANISHDGNYLCRMKLGETEVTKQEHLSVVKPLTLSVHSERSQFPDFSVLTVT 125
Score = 31.2 bits (70), Expect = 2.7
Identities = 4/55 (7%), Positives = 13/55 (23%)
Query: 1850 IKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLH 1904
+ G+Y + V+ +++ + T+
Sbjct: 71 VTAANISHDGNYLCRMKLGETEVTKQEHLSVVKPLTLSVHSERSQFPDFSVLTVT 125
Score = 31.2 bits (70), Expect = 3.0
Identities = 18/98 (18%), Positives = 31/98 (31%), Gaps = 19/98 (19%)
Query: 1432 ITVKAGED--FSIHVPFMAF-PQPAAFWFANDSIIDDSD-TRVHKQLTM----------- 1476
+T GE + + ++ P+ WF + R+H +
Sbjct: 1 VTAFLGERVTLTSYWRRVSLGPEIEVSWFKLGPGEEQVLIGRMHHDVIFIEWPFRGFFDI 60
Query: 1477 ----NSASLVVKNSQRSDGGQYRLQLKNPAGFDTATLH 1510
N+ LVV + S G Y ++K T H
Sbjct: 61 HRSANTFFLVVTAANISHDGNYLCRMKLGETEVTKQEH 98
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor
tyrosine kinase, class III, recep ligand complex,
cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A
{Mus musculus}
Length = 290
Score = 94.0 bits (233), Expect = 1e-20
Identities = 37/233 (15%), Positives = 68/233 (29%), Gaps = 26/233 (11%)
Query: 449 EFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCP 508
+ N +S V ++DP ++ + ++ +A +C +T
Sbjct: 71 TYTCSNSNGLT------SSIYVFVRDP-----AKLFLVGLPLFGKEDSDALVRCPLTDPQ 119
Query: 509 KPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGG-VKSTKAE 567
S ++ + P+ + T I N C A G + S K
Sbjct: 120 VSQYSLIECDGKSLPTDLTFVPNPKAGIT-IKNVKRAYHRLCVRCAAQRDGTWLHSDKFT 178
Query: 568 LIIMTAPKFNVPPRFRDTA---YFDKGENVVVKIPFTGYPKP-KITWYRDNEVIESGGHF 623
L + A K P KG+ V W + N +
Sbjct: 179 LKVREAIKA--IPVVSVPETSHLLKKGDTFTVVCTIKDVSTSVNSMWLKMNPQPQHIAQV 236
Query: 624 HVETS-------ERHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQISDR 669
+ ER LTI A D+ + A N G + +++ ++
Sbjct: 237 KHNSWHRGDFNYERQETLTISSARVDDSGVFMCYANNTFGSANVTTTLKVVEK 289
Score = 92.1 bits (228), Expect = 5e-20
Identities = 28/199 (14%), Positives = 58/199 (29%), Gaps = 16/199 (8%)
Query: 89 EKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLR-NGREISSGARYRVETAGGVFR 147
+ + L ++C T V + + +G+ + + + G+
Sbjct: 90 DPAKLFLVGLPLFGKEDSDALVRCPLTDPQVSQYSLIECDGKSLPTDLTFVPNPKAGI-- 147
Query: 148 LHFNEVTDVDNGDYTCEAYNSVGFAHTSS-----RVKIGTPPRIDRMPNALYIPEGDNTK 202
N C A + H+ R I P + + + +GD
Sbjct: 148 TIKNVKRAYHRLCVRCAAQRDGTWLHSDKFTLKVREAIKAIPVVSVPETSHLLKKGDTFT 207
Query: 203 VK-IFYAGDQPMEVSLTKNGRVVQSDDRFKFTV-------LDDYIIIFIKEIRKEDAGDY 254
V + K Q + K + + I R +D+G +
Sbjct: 208 VVCTIKDVSTSVNSMWLKMNPQPQHIAQVKHNSWHRGDFNYERQETLTISSARVDDSGVF 267
Query: 255 TVNLSNSSGSVSGTFTINI 273
+N+ GS + T T+ +
Sbjct: 268 MCYANNTFGSANVTTTLKV 286
Score = 92.1 bits (228), Expect = 5e-20
Identities = 28/199 (14%), Positives = 58/199 (29%), Gaps = 16/199 (8%)
Query: 1696 EKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLR-NGREISSGARYRVETAGGVFR 1754
+ + L ++C T V + + +G+ + + + G+
Sbjct: 90 DPAKLFLVGLPLFGKEDSDALVRCPLTDPQVSQYSLIECDGKSLPTDLTFVPNPKAGI-- 147
Query: 1755 LHFNEVTDVDNGDYTCEAYNSVGFAHTSS-----RVKIGTPPRIDRMPNALYIPEGDNTK 1809
N C A + H+ R I P + + + +GD
Sbjct: 148 TIKNVKRAYHRLCVRCAAQRDGTWLHSDKFTLKVREAIKAIPVVSVPETSHLLKKGDTFT 207
Query: 1810 VK-IFYAGDQPMEVSLTKNGRVVQSDDRFKFTV-------LDDYIIIFIKEIRKEDAGDY 1861
V + K Q + K + + I R +D+G +
Sbjct: 208 VVCTIKDVSTSVNSMWLKMNPQPQHIAQVKHNSWHRGDFNYERQETLTISSARVDDSGVF 267
Query: 1862 TVNLSNSSGSVSGTFTINI 1880
+N+ GS + T T+ +
Sbjct: 268 MCYANNTFGSANVTTTLKV 286
Score = 72.8 bits (178), Expect = 1e-13
Identities = 22/207 (10%), Positives = 48/207 (23%), Gaps = 21/207 (10%)
Query: 475 PMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGD 534
P P I C + W + + E
Sbjct: 7 PGEPSPPSIHPAQSELIVEAGDTLSLTCIDPD----FVRWTFKTYF-------NEMVENK 55
Query: 535 TYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENV 594
I Y C N + + + K + + + +
Sbjct: 56 KNEWIQEKAEATRTGTYTCSNSNGLT---SSIYVFVRDPAKLFLVGL---PLFGKEDSDA 109
Query: 595 VVKIPFTGYPKPKITWYR-DNEVIESGGHFHVETSERHAILTIRDASNVDTAPYRVVAEN 653
+V+ P T + + D + + + F + + I R A+
Sbjct: 110 LVRCPLTDPQVSQYSLIECDGKSLPTDLTFVP--NPKAGITIKNVKRAYHRLCVRCAAQR 167
Query: 654 DLG-MDSAIVKIQISDRPDPPQFPTVE 679
D + S +++ + +V
Sbjct: 168 DGTWLHSDKFTLKVREAIKAIPVVSVP 194
Score = 70.9 bits (173), Expect = 5e-13
Identities = 32/196 (16%), Positives = 57/196 (29%), Gaps = 18/196 (9%)
Query: 87 GGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVF 146
P +L+V G L+L C RW +
Sbjct: 9 EPSPPSIHPAQSELIVEAGDTLSLTCIDPDFV----RWTFKTYFNEMVENKK-------N 57
Query: 147 RLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIF 206
+ G YTC N + +S V + P ++ + L+ E + V+
Sbjct: 58 EWIQEKAEATRTGTYTCSNSNGLT---SSIYVFVRDPAKLFLVGLPLFGKEDSDALVRCP 114
Query: 207 YAGDQPMEVSLTK-NGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYT-VNLSNSSGS 264
Q + SL + +G+ + +D F I +K R + +
Sbjct: 115 LTDPQVSQYSLIECDGKSLPTDLTFVPNPKAGITIKNVK--RAYHRLCVRCAAQRDGTWL 172
Query: 265 VSGTFTINITGLPGPP 280
S FT+ +
Sbjct: 173 HSDKFTLKVREAIKAI 188
Score = 70.9 bits (173), Expect = 5e-13
Identities = 32/196 (16%), Positives = 57/196 (29%), Gaps = 18/196 (9%)
Query: 1694 GGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVF 1753
P +L+V G L+L C RW +
Sbjct: 9 EPSPPSIHPAQSELIVEAGDTLSLTCIDPDFV----RWTFKTYFNEMVENKK-------N 57
Query: 1754 RLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIF 1813
+ G YTC N + +S V + P ++ + L+ E + V+
Sbjct: 58 EWIQEKAEATRTGTYTCSNSNGLT---SSIYVFVRDPAKLFLVGLPLFGKEDSDALVRCP 114
Query: 1814 YAGDQPMEVSLTK-NGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYT-VNLSNSSGS 1871
Q + SL + +G+ + +D F I +K R + +
Sbjct: 115 LTDPQVSQYSLIECDGKSLPTDLTFVPNPKAGITIKNVK--RAYHRLCVRCAAQRDGTWL 172
Query: 1872 VSGTFTINITGLPGPP 1887
S FT+ +
Sbjct: 173 HSDKFTLKVREAIKAI 188
Score = 63.2 bits (153), Expect = 2e-10
Identities = 26/155 (16%), Positives = 46/155 (29%), Gaps = 19/155 (12%)
Query: 2056 EFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCP 2115
+ N +S V ++DP ++ + ++ +A +C +T
Sbjct: 71 TYTCSNSNGLT------SSIYVFVRDP-----AKLFLVGLPLFGKEDSDALVRCPLTDPQ 119
Query: 2116 KPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGG-VKSTKAE 2174
S ++ + P+ + T I N C A G + S K
Sbjct: 120 VSQYSLIECDGKSLPTDLTFVPNPKAGIT-IKNVKRAYHRLCVRCAAQRDGTWLHSDKFT 178
Query: 2175 LIIMTAPKFNVPPRF----RDTAYFESDVVVVVCV 2205
L + A K P + D VVC
Sbjct: 179 LKVREAIKA--IPVVSVPETSHLLKKGDTFTVVCT 211
Score = 56.3 bits (135), Expect = 3e-08
Identities = 24/123 (19%), Positives = 38/123 (30%), Gaps = 9/123 (7%)
Query: 2064 EAGLSLPSSASNSVQIK-DPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKP-TISW 2121
A S+ +K P + VP + + CTI W
Sbjct: 164 AAQRDGTWLHSDKFTLKVREAIKAIPVVSVPETSHLLKKGDTFTVVCTIKDVSTSVNSMW 223
Query: 2122 LKGSREITPSARHHI-------FAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAE 2174
LK + + A+ F TL I+S D+ ++C A N G +
Sbjct: 224 LKMNPQPQHIAQVKHNSWHRGDFNYERQETLTISSARVDDSGVFMCYANNTFGSANVTTT 283
Query: 2175 LII 2177
L +
Sbjct: 284 LKV 286
Score = 50.1 bits (119), Expect = 4e-06
Identities = 24/149 (16%), Positives = 46/149 (30%), Gaps = 13/149 (8%)
Query: 1093 NRVTSLIENHEYEFR----VCAVNAAGQGPWSSSSDIIMCCAPPCAPKITSDLSIRDMTV 1148
+ I+N + + CA G S + + A P ++ + +
Sbjct: 143 PKAGITIKNVKRAYHRLCVRCAAQRDGTWLHSDKFTLKVREAIKAIPVVSVPET--SHLL 200
Query: 1149 LAGEEFTITVPFSGRPKPTPI-WTVNGDEVSPDGRIKFETSENQTIYRNKSAK------R 1201
G+ FT+ W + ++K + + R
Sbjct: 201 KKGDTFTVVCTIKDVSTSVNSMWLKMNPQPQHIAQVKHNSWHRGDFNYERQETLTISSAR 260
Query: 1202 ATDSGSYTIQLVNTVGSDSASCKVYVVDK 1230
DSG + NT GS + + + VV+K
Sbjct: 261 VDDSGVFMCYANNTFGSANVTTTLKVVEK 289
Score = 42.4 bits (99), Expect = 0.001
Identities = 14/123 (11%), Positives = 22/123 (17%), Gaps = 16/123 (13%)
Query: 2082 PMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGD 2141
P P I C + W + + E
Sbjct: 7 PGEPSPPSIHPAQSELIVEAGDTLSLTCIDPD----FVRWTFKTYF-------NEMVENK 55
Query: 2142 TYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPRFRDTAYFESDVVV 2201
I Y C N + + + K + E +
Sbjct: 56 KNEWIQEKAEATRTGTYTCSNSNGLT---SSIYVFVRDPAKLFLVG--LPLFGKEDSDAL 110
Query: 2202 VVC 2204
V C
Sbjct: 111 VRC 113
Score = 41.3 bits (96), Expect = 0.003
Identities = 11/93 (11%), Positives = 21/93 (22%), Gaps = 5/93 (5%)
Query: 1144 RDMTVLAGEEFTITVPFSGRPKPTPIWT-VNGDEVSPDGRIKFETSENQTIYRNKSAKRA 1202
+ + + P + +G + D TI K+ KRA
Sbjct: 99 LPLFGKEDSDALVRCPLTDPQVSQYSLIECDGKSLPTDLTFVPNPKAGITI---KNVKRA 155
Query: 1203 TDSGSYT-IQLVNTVGSDSASCKVYVVDKPSPP 1234
+ S + V +
Sbjct: 156 YHRLCVRCAAQRDGTWLHSDKFTLKVREAIKAI 188
Score = 39.7 bits (92), Expect = 0.008
Identities = 13/116 (11%), Positives = 29/116 (25%), Gaps = 9/116 (7%)
Query: 1402 SNSEPGKQSGP--VIVEEQPNKPVMDLSGVRDITVKAGEDFSIHVPFMAFPQPAAF-WFA 1458
S + V E + +K G+ F++ W
Sbjct: 166 QRDGTWLHSDKFTLKVREAIKAIPVVSVPETSHLLKKGDTFTVVCTIKDVSTSVNSMWLK 225
Query: 1459 ND------SIIDDSDTRVHKQLTMNSASLVVKNSQRSDGGQYRLQLKNPAGFDTAT 1508
+ + + + +L + +++ D G + N G T
Sbjct: 226 MNPQPQHIAQVKHNSWHRGDFNYERQETLTISSARVDDSGVFMCYANNTFGSANVT 281
>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in
U twenty twenty, neurogenesis, structural genomics,
NPPSFA; NMR {Homo sapiens}
Length = 118
Score = 88.3 bits (219), Expect = 1e-20
Identities = 26/111 (23%), Positives = 35/111 (31%), Gaps = 4/111 (3%)
Query: 475 PMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPS-ARHHIFAEG 533
++ P I N + C TG P PTI W K ++ +R G
Sbjct: 3 SGSSGPPVIRQGPVNQTVAVDGTFVLSCVATGSPVPTILWRKDGVLVSTQDSRIKQLENG 62
Query: 534 DTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPRFRD 584
L I D Y C A G + A + + PPR D
Sbjct: 63 ---VLQIRYAKLGDTGRYTCIASTPSGEATWSAYIEVQEFGVPVQPPRPTD 110
Score = 88.3 bits (219), Expect = 1e-20
Identities = 26/111 (23%), Positives = 35/111 (31%), Gaps = 4/111 (3%)
Query: 2082 PMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPS-ARHHIFAEG 2140
++ P I N + C TG P PTI W K ++ +R G
Sbjct: 3 SGSSGPPVIRQGPVNQTVAVDGTFVLSCVATGSPVPTILWRKDGVLVSTQDSRIKQLENG 62
Query: 2141 DTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPRFRD 2191
L I D Y C A G + A + + PPR D
Sbjct: 63 ---VLQIRYAKLGDTGRYTCIASTPSGEATWSAYIEVQEFGVPVQPPRPTD 110
Score = 83.7 bits (207), Expect = 6e-19
Identities = 25/101 (24%), Positives = 39/101 (38%), Gaps = 4/101 (3%)
Query: 91 PDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREI-SSGARYRVETAGGVFRLH 149
P + V + L C ATG+PVP W ++G + + +R + G L
Sbjct: 9 PVIRQGPVNQTVAVDGTFVLSCVATGSPVPTILWRKDGVLVSTQDSRIKQLENGV---LQ 65
Query: 150 FNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMP 190
D G YTC A G A S+ +++ + P
Sbjct: 66 IRYAKLGDTGRYTCIASTPSGEATWSAYIEVQEFGVPVQPP 106
Score = 83.7 bits (207), Expect = 6e-19
Identities = 25/101 (24%), Positives = 39/101 (38%), Gaps = 4/101 (3%)
Query: 1698 PDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREI-SSGARYRVETAGGVFRLH 1756
P + V + L C ATG+PVP W ++G + + +R + G L
Sbjct: 9 PVIRQGPVNQTVAVDGTFVLSCVATGSPVPTILWRKDGVLVSTQDSRIKQLENGV---LQ 65
Query: 1757 FNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMP 1797
D G YTC A G A S+ +++ + P
Sbjct: 66 IRYAKLGDTGRYTCIASTPSGEATWSAYIEVQEFGVPVQPP 106
Score = 62.9 bits (153), Expect = 1e-11
Identities = 24/105 (22%), Positives = 36/105 (34%), Gaps = 7/105 (6%)
Query: 573 APKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIE-SGGHFHVETSERH 631
P P + A V+ TG P P I W +D ++ +
Sbjct: 8 PPVIRQGPVNQTVA---VDGTFVLSCVATGSPVPTILWRKDGVLVSTQDSRIKQLEN--- 61
Query: 632 AILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQISDRPDPPQFP 676
+L IR A DT Y +A G + I++ + P Q P
Sbjct: 62 GVLQIRYAKLGDTGRYTCIASTPSGEATWSAYIEVQEFGVPVQPP 106
Score = 61.7 bits (150), Expect = 3e-11
Identities = 25/108 (23%), Positives = 40/108 (37%), Gaps = 5/108 (4%)
Query: 1134 APKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQTI 1193
P I + TV F ++ +G P PT +W +G VS + + EN +
Sbjct: 8 PPVIRQGPV--NQTVAVDGTFVLSCVATGSPVPTILWRKDGVLVSTQDS-RIKQLENGVL 64
Query: 1194 YRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYVVDKPSPPQGPLDVS 1241
+ + D+G YT G + S + V + P Q P
Sbjct: 65 QIRYA--KLGDTGRYTCIASTPSGEATWSAYIEVQEFGVPVQPPRPTD 110
Score = 49.0 bits (117), Expect = 7e-07
Identities = 21/105 (20%), Positives = 38/105 (36%), Gaps = 2/105 (1%)
Query: 183 PPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIF 242
PP I + P + + G + K+G +V + D + L++ ++
Sbjct: 8 PPVIRQGPVNQTVAVDGTFVLSCVATGSPVPTILWRKDGVLVSTQDS-RIKQLEN-GVLQ 65
Query: 243 IKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPIGPLDVS 287
I+ + D G YT S SG + + I + P P
Sbjct: 66 IRYAKLGDTGRYTCIASTPSGEATWSAYIEVQEFGVPVQPPRPTD 110
Score = 49.0 bits (117), Expect = 7e-07
Identities = 21/105 (20%), Positives = 38/105 (36%), Gaps = 2/105 (1%)
Query: 1790 PPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIF 1849
PP I + P + + G + K+G +V + D + L++ ++
Sbjct: 8 PPVIRQGPVNQTVAVDGTFVLSCVATGSPVPTILWRKDGVLVSTQDS-RIKQLEN-GVLQ 65
Query: 1850 IKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPIGPLDVS 1894
I+ + D G YT S SG + + I + P P
Sbjct: 66 IRYAKLGDTGRYTCIASTPSGEATWSAYIEVQEFGVPVQPPRPTD 110
Score = 49.0 bits (117), Expect = 7e-07
Identities = 17/93 (18%), Positives = 36/93 (38%), Gaps = 3/93 (3%)
Query: 1430 RDITVKAGEDFSIHVPFMAFPQPAAFWFANDSIIDDSDTRVHKQLTMNSASLVVKNSQRS 1489
+ TV F + P P W + ++ D+R+ + + L ++ ++
Sbjct: 16 VNQTVAVDGTFVLSCVATGSPVPTILWRKDGVLVSTQDSRIK---QLENGVLQIRYAKLG 72
Query: 1490 DGGQYRLQLKNPAGFDTATLHSRLRTLPDSVNP 1522
D G+Y P+G T + + ++ V P
Sbjct: 73 DTGRYTCIASTPSGEATWSAYIEVQEFGVPVQP 105
>2ed7_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal
cancer suppressor, structural genomics, NPPSFA; NMR
{Homo sapiens}
Length = 119
Score = 88.2 bits (219), Expect = 1e-20
Identities = 22/110 (20%), Positives = 37/110 (33%), Gaps = 3/110 (2%)
Query: 658 DSAIVKIQISDRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSWI 717
S P P+ + + L WR P + NI + V +
Sbjct: 6 SGKPAIPSSSVLPSAPRDVVPVLVSSRFVRLSWRPPA-EAKGNIQTFTVFFSREGDNRER 64
Query: 718 RVGNTRF--TTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKDT 765
+ T+ + + L P Y FRV A N +G + S + T ++
Sbjct: 65 ALNTTQPGSLQLTVGNLKPEAMYTFRVVAYNEWGPGESSQPIKVATQPES 114
Score = 87.9 bits (218), Expect = 2e-20
Identities = 29/100 (29%), Positives = 38/100 (38%), Gaps = 1/100 (1%)
Query: 368 PIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRV 427
S PS P V V FV LSW P + G+ IQ + + G + + +
Sbjct: 8 KPAIPSSSVLPSAPRDVVPVLVSSRFVRLSWRPPAEAKGN-IQTFTVFFSREGDNRERAL 66
Query: 428 NVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSAS 467
N Q+ + NL Y FRV A NE G S
Sbjct: 67 NTTQPGSLQLTVGNLKPEAMYTFRVVAYNEWGPGESSQPI 106
Score = 87.9 bits (218), Expect = 2e-20
Identities = 29/100 (29%), Positives = 38/100 (38%), Gaps = 1/100 (1%)
Query: 1975 PIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRV 2034
S PS P V V FV LSW P + G+ IQ + + G + + +
Sbjct: 8 KPAIPSSSVLPSAPRDVVPVLVSSRFVRLSWRPPAEAKGN-IQTFTVFFSREGDNRERAL 66
Query: 2035 NVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSAS 2074
N Q+ + NL Y FRV A NE G S
Sbjct: 67 NTTQPGSLQLTVGNLKPEAMYTFRVVAYNEWGPGESSQPI 106
Score = 85.2 bits (211), Expect = 2e-19
Identities = 23/108 (21%), Positives = 42/108 (38%), Gaps = 5/108 (4%)
Query: 900 DRPHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTKVSSY-VTTP 958
P P ++ + + L W PP + G I + V +++ +
Sbjct: 16 VLPSAPRDVVPVLVSSRFVRLSWRPPAEAKG-NIQTFTVFFSREGDNRERALNTTQPGSL 74
Query: 959 FVRVRNLAIGSTYEFRVMAENQYGLSKPALTIDPIKAKHPFDVPGAPG 1006
+ V NL + Y FRV+A N++G + + PIK + + G
Sbjct: 75 QLTVGNLKPEAMYTFRVVAYNEWGPGESS---QPIKVATQPESGPSSG 119
Score = 84.0 bits (208), Expect = 5e-19
Identities = 27/104 (25%), Positives = 41/104 (39%), Gaps = 6/104 (5%)
Query: 1217 GSDSASCKVYVV---DKPSPPQGPLDVSDITPESCSLSWKPPLDDGGSPITNYVVEKYES 1273
GS +S K + PS P+ + ++ LSW+PP + G I + V
Sbjct: 1 GSSGSSGKPAIPSSSVLPSAPRD-VVPVLVSSRFVRLSWRPPAEAKG-NIQTFTVFFSRE 58
Query: 1274 ATGFWSKLSSF-VRSPAYDVFGLETNRQYRFRVRAENQYGVSEP 1316
L++ S V L+ Y FRV A N++G E
Sbjct: 59 GDNRERALNTTQPGSLQLTVGNLKPEAMYTFRVVAYNEWGPGES 102
Score = 82.9 bits (205), Expect = 1e-18
Identities = 29/123 (23%), Positives = 42/123 (34%), Gaps = 6/123 (4%)
Query: 261 SSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDIS 320
SSGS + + LP P + ++ L W PP G + + V
Sbjct: 2 SSGSSGKPAIPSSSVLPSAPRD-VVPVLVSSRFVRLSWRPPAEAKG-NIQTFTVFFSREG 59
Query: 321 MPHWICISTT-CHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPS 379
++TT V L Y F V+A NE G G + PIK + +
Sbjct: 60 DNRERALNTTQPGSLQLTVGNLKPEAMYTFRVVAYNEWGPGESSQ---PIKVATQPESGP 116
Query: 380 PPG 382
G
Sbjct: 117 SSG 119
Score = 82.9 bits (205), Expect = 1e-18
Identities = 29/123 (23%), Positives = 42/123 (34%), Gaps = 6/123 (4%)
Query: 1868 SSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDIS 1927
SSGS + + LP P + ++ L W PP G + + V
Sbjct: 2 SSGSSGKPAIPSSSVLPSAPRD-VVPVLVSSRFVRLSWRPPAEAKG-NIQTFTVFFSREG 59
Query: 1928 MPHWICISTT-CHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPS 1986
++TT V L Y F V+A NE G G + PIK + +
Sbjct: 60 DNRERALNTTQPGSLQLTVGNLKPEAMYTFRVVAYNEWGPGESSQ---PIKVATQPESGP 116
Query: 1987 PPG 1989
G
Sbjct: 117 SSG 119
Score = 78.2 bits (193), Expect = 5e-17
Identities = 24/135 (17%), Positives = 33/135 (24%), Gaps = 33/135 (24%)
Query: 991 DPIKAKHPFDVPGAPGAPKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIK 1050
+P AP V + + L W P G IQ + V D++
Sbjct: 7 GKPAIPSSSVLPSAPRDVVPVLVSSRFVRLSWRPPAEAKG-NIQTFTVFFSREGDNRERA 65
Query: 1051 ASMAHIPDTSLKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCA 1110
+ L V +L Y FRV A
Sbjct: 66 LNTTQPGSLQL--------------------------------TVGNLKPEAMYTFRVVA 93
Query: 1111 VNAAGQGPWSSSSDI 1125
N G G S +
Sbjct: 94 YNEWGPGESSQPIKV 108
Score = 56.3 bits (136), Expect = 2e-09
Identities = 20/123 (16%), Positives = 29/123 (23%), Gaps = 46/123 (37%)
Query: 1559 VDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEG 1618
V + + L W P G IQ + V D++ +
Sbjct: 27 VLVSSRFVRLSWRPPAEAKG-NIQTFTVFFSREGDNRERALNTTQPGSLQ---------- 75
Query: 1619 KSIGSERGSTAQFLEREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKS 1678
+V NL Y FR++A N G
Sbjct: 76 -----------------------------------LTVGNLKPEAMYTFRVVAYNEWGPG 100
Query: 1679 EPS 1681
E S
Sbjct: 101 ESS 103
Score = 56.3 bits (136), Expect = 2e-09
Identities = 13/53 (24%), Positives = 18/53 (33%)
Query: 22 YIIERREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPS 74
+ + G N +V NL Y FR++A N G E S
Sbjct: 51 FTVFFSREGDNRERALNTTQPGSLQLTVGNLKPEAMYTFRVVAYNEWGPGESS 103
Score = 40.1 bits (94), Expect = 0.001
Identities = 19/112 (16%), Positives = 33/112 (29%), Gaps = 11/112 (9%)
Query: 1320 DNSITAKFPFTVPDPPGQPQIVDWDTNNATLMWDRPRTDGGSKIQGYKMLLKTPTGELPT 1379
+P P V + L W P + IQ + + + G+
Sbjct: 6 SGKPAIPSSSVLPSAPRDVVPVLVSSRFVRLSWRPP-AEAKGNIQTFT-VFFSREGDNRE 63
Query: 1380 TIWSKIRPTSSTVYCKDTTMNSS--------NSE-PGKQSGPVIVEEQPNKP 1422
+ +P S + + + N PG+ S P+ V QP
Sbjct: 64 RALNTTQPGSLQLTVGNLKPEAMYTFRVVAYNEWGPGESSQPIKVATQPESG 115
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform;
transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A
1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A
1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Length = 365
Score = 95.2 bits (237), Expect = 1e-20
Identities = 36/157 (22%), Positives = 58/157 (36%), Gaps = 9/157 (5%)
Query: 750 RSDPSTTSDLITTKDTFKKQIKKRQYDFDETGKKIRGKADEKVSDYDQYVFDIYSKYVPQ 809
R + + F + ++ + + D + + F
Sbjct: 24 REIRHLPNLNREQRRAFIRSLRDDPSQSANLLAEAKKLNDAQPKGTENLYFQSMGPEDEL 83
Query: 810 PVDIKTSSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVS--------HNLEK 861
P Y YD + IG G VV RC R TG+ FA K + V+ +
Sbjct: 84 PDWAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVR 143
Query: 862 ELIRKEIDIMNQLH-HPKLINLHDAFEDDDEMVLIFE 897
E R+E I+ Q+ HP +I L D++E M L+F+
Sbjct: 144 EATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFD 180
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain,
cytokine decoy RE virus/viral protein, type-1
interferon, soluble A/B-IFNR; HET: EPE; 2.10A
{Ectromelia virus}
Length = 329
Score = 93.7 bits (232), Expect = 2e-20
Identities = 27/230 (11%), Positives = 50/230 (21%), Gaps = 27/230 (11%)
Query: 454 AQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGC-PKPTI 512
+ G + + ++ K P I + C I I
Sbjct: 109 VTTKNGDCVQGIVRSHIR-------KPPSCIPETYELGTHDKYGIDLYCGILYAKHYNNI 161
Query: 513 SWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMT 572
+W K ++E+ + + LII++ D+ Y C +
Sbjct: 162 TWYKNNQELIIDGTKYSQSGQ---NLIIHNPELEDSGRYDCYVHYDDVRIKNDIVVSRCK 218
Query: 573 APKFNVPPRFRDTAYFDK------GENVVVKIPFTGYPKPK----ITWYRDNEVIESGGH 622
R D GE + I W + I
Sbjct: 219 ILTVIPSQDHRFKLILDPKINVTIGEPANITCTAVSTSLLVDDVLIDWENPSGWIIGLDF 278
Query: 623 FHVETSERH-----AILTIRDASNVDT-APYRVVAENDLGMDSAIVKIQI 666
A L + + Y N + + +
Sbjct: 279 GVYSILTSSGGITEATLYFENVTEEYIGNTYTCRGHNYYFDKTLTTTVVL 328
Score = 89.9 bits (222), Expect = 4e-19
Identities = 26/231 (11%), Positives = 59/231 (25%), Gaps = 30/231 (12%)
Query: 63 IAVNAIGKSEPSICTTPVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEAT-GTPVPK 121
G I + ++ + P I +L + L C
Sbjct: 108 TVTTKNGDCVQGIVRSHIR-------KPPSCIPETYELGTHDKYGIDLYCGILYAKHYNN 160
Query: 122 CRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIG 181
W +N +E+ ++ L + D+G Y C + V
Sbjct: 161 ITWYKNNQELIIDGTKYSQSGQ---NLIIHNPELEDSGRYDCYVHYDDVRIKNDIVVSRC 217
Query: 182 TPPRID---------RMPNALYIPEGDNT----KVKIFYAGDQPMEVSLTKNGRVVQSDD 228
+ + + + G+ + + + D
Sbjct: 218 KILTVIPSQDHRFKLILDPKINVTIGEPANITCTAVSTSLLVDDVLIDWENPSGWIIGLD 277
Query: 229 RFKFTVLDDYI-----IIFIKEIRKEDAG-DYTVNLSNSSGSVSGTFTINI 273
+++L ++ + + +E G YT N + T T+ +
Sbjct: 278 FGVYSILTSSGGITEATLYFENVTEEYIGNTYTCRGHNYYFDKTLTTTVVL 328
Score = 89.9 bits (222), Expect = 4e-19
Identities = 26/231 (11%), Positives = 59/231 (25%), Gaps = 30/231 (12%)
Query: 1670 IAVNAIGKSEPSICTTPVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEAT-GTPVPK 1728
G I + ++ + P I +L + L C
Sbjct: 108 TVTTKNGDCVQGIVRSHIR-------KPPSCIPETYELGTHDKYGIDLYCGILYAKHYNN 160
Query: 1729 CRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIG 1788
W +N +E+ ++ L + D+G Y C + V
Sbjct: 161 ITWYKNNQELIIDGTKYSQSGQ---NLIIHNPELEDSGRYDCYVHYDDVRIKNDIVVSRC 217
Query: 1789 TPPRID---------RMPNALYIPEGDNT----KVKIFYAGDQPMEVSLTKNGRVVQSDD 1835
+ + + + G+ + + + D
Sbjct: 218 KILTVIPSQDHRFKLILDPKINVTIGEPANITCTAVSTSLLVDDVLIDWENPSGWIIGLD 277
Query: 1836 RFKFTVLDDYI-----IIFIKEIRKEDAG-DYTVNLSNSSGSVSGTFTINI 1880
+++L ++ + + +E G YT N + T T+ +
Sbjct: 278 FGVYSILTSSGGITEATLYFENVTEEYIGNTYTCRGHNYYFDKTLTTTVVL 328
Score = 84.9 bits (209), Expect = 2e-17
Identities = 26/189 (13%), Positives = 50/189 (26%), Gaps = 14/189 (7%)
Query: 95 VPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREI------SSGARYRVETAGGVFRL 148
+ + LG+ + +C + R+ + + G L
Sbjct: 34 GGTMNDMAALGEPFSAKCPPIEDSLLSHRYNDKDNVVNWEKIGKTRRPLNRRVKNGD--L 91
Query: 149 HFNEVTDVDNG-DYTCEAYNSVGFAHTSS-RVKIGTPPRIDRMPNALYIPEGDNTKVK-I 205
T D+ Y C G R I PP L + +
Sbjct: 92 WIANYTSNDSHRRYLCTVTTKNGDCVQGIVRSHIRKPPSCIPETYELGTHDKYGIDLYCG 151
Query: 206 FYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSV 265
++ KN + + D K++ +II ED+G Y + +
Sbjct: 152 ILYAKHYNNITWYKNNQELIIDGT-KYSQSGQNLII--HNPELEDSGRYDCYVHYDDVRI 208
Query: 266 SGTFTINIT 274
++
Sbjct: 209 KNDIVVSRC 217
Score = 84.9 bits (209), Expect = 2e-17
Identities = 26/189 (13%), Positives = 50/189 (26%), Gaps = 14/189 (7%)
Query: 1702 VPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREI------SSGARYRVETAGGVFRL 1755
+ + LG+ + +C + R+ + + G L
Sbjct: 34 GGTMNDMAALGEPFSAKCPPIEDSLLSHRYNDKDNVVNWEKIGKTRRPLNRRVKNGD--L 91
Query: 1756 HFNEVTDVDNG-DYTCEAYNSVGFAHTSS-RVKIGTPPRIDRMPNALYIPEGDNTKVK-I 1812
T D+ Y C G R I PP L + +
Sbjct: 92 WIANYTSNDSHRRYLCTVTTKNGDCVQGIVRSHIRKPPSCIPETYELGTHDKYGIDLYCG 151
Query: 1813 FYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSV 1872
++ KN + + D K++ +II ED+G Y + +
Sbjct: 152 ILYAKHYNNITWYKNNQELIIDGT-KYSQSGQNLII--HNPELEDSGRYDCYVHYDDVRI 208
Query: 1873 SGTFTINIT 1881
++
Sbjct: 209 KNDIVVSRC 217
Score = 77.6 bits (190), Expect = 6e-15
Identities = 30/212 (14%), Positives = 52/212 (24%), Gaps = 23/212 (10%)
Query: 483 IIVPLRNANAIQNHNAQFQCTITGCPK---------PTISWLKGSREITPSARHHIFAEG 533
+ N A +C ++W K + P R
Sbjct: 32 MFGGTMNDMAALGEPFSAKCPPIEDSLLSHRYNDKDNVVNWEKIGKTRRPLNRRVK---- 87
Query: 534 DTYTLIINSVYGVDADEYVCRAVNKGG-VKSTKAELIIMTAPKFNVPPRFRDTAYFDKGE 592
+ I N Y+C K G I P
Sbjct: 88 NGDLWIANYTSNDSHRRYLCTVTTKNGDCVQGIVRSHIRKPPSCIPETY---ELGTHDKY 144
Query: 593 NVVVKIPFT-GYPKPKITWYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAPYRVVA 651
+ + ITWY++N+ + G + ++ + L I + D+ Y
Sbjct: 145 GIDLYCGILYAKHYNNITWYKNNQELIIDGTKYSQSGQN---LIIHNPELEDSGRYDCYV 201
Query: 652 ENDLG--MDSAIVKIQISDRPDPPQFPTVEDI 681
D + +V P Q + I
Sbjct: 202 HYDDVRIKNDIVVSRCKILTVIPSQDHRFKLI 233
Score = 69.9 bits (170), Expect = 2e-12
Identities = 18/144 (12%), Positives = 37/144 (25%), Gaps = 11/144 (7%)
Query: 2061 AQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGC-PKPTI 2119
+ G + + ++ K P I + C I I
Sbjct: 109 VTTKNGDCVQGIVRSHIR-------KPPSCIPETYELGTHDKYGIDLYCGILYAKHYNNI 161
Query: 2120 SWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMT 2179
+W K ++E+ + + LII++ D+ Y C +
Sbjct: 162 TWYKNNQELIIDGTKYSQSGQ---NLIIHNPELEDSGRYDCYVHYDDVRIKNDIVVSRCK 218
Query: 2180 APKFNVPPRFRDTAYFESDVVVVV 2203
R + + V +
Sbjct: 219 ILTVIPSQDHRFKLILDPKINVTI 242
Score = 56.0 bits (134), Expect = 6e-08
Identities = 20/128 (15%), Positives = 31/128 (24%), Gaps = 12/128 (9%)
Query: 453 YAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKP-- 510
Y + S + + + I+ P N A CT
Sbjct: 203 YDDVRIKNDIVVSRCKILTVIPSQDHRFKLILDP--KINVTIGEPANITCTAVSTSLLVD 260
Query: 511 --TISWLKGSREITPSARHHIFAEGD-----TYTLIINSVYGVDA-DEYVCRAVNKGGVK 562
I W S I TL +V + Y CR N K
Sbjct: 261 DVLIDWENPSGWIIGLDFGVYSILTSSGGITEATLYFENVTEEYIGNTYTCRGHNYYFDK 320
Query: 563 STKAELII 570
+ +++
Sbjct: 321 TLTTTVVL 328
Score = 56.0 bits (134), Expect = 6e-08
Identities = 20/128 (15%), Positives = 31/128 (24%), Gaps = 12/128 (9%)
Query: 2060 YAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKP-- 2117
Y + S + + + I+ P N A CT
Sbjct: 203 YDDVRIKNDIVVSRCKILTVIPSQDHRFKLILDP--KINVTIGEPANITCTAVSTSLLVD 260
Query: 2118 --TISWLKGSREITPSARHHIFAEGD-----TYTLIINSVYGVDA-DEYVCRAVNKGGVK 2169
I W S I TL +V + Y CR N K
Sbjct: 261 DVLIDWENPSGWIIGLDFGVYSILTSSGGITEATLYFENVTEEYIGNTYTCRGHNYYFDK 320
Query: 2170 STKAELII 2177
+ +++
Sbjct: 321 TLTTTVVL 328
Score = 42.1 bits (98), Expect = 0.001
Identities = 16/128 (12%), Positives = 27/128 (21%), Gaps = 16/128 (12%)
Query: 2090 IIVPLRNANAIQNHNAQFQCTITGCPK---------PTISWLKGSREITPSARHHIFAEG 2140
+ N A +C ++W K + P R
Sbjct: 32 MFGGTMNDMAALGEPFSAKCPPIEDSLLSHRYNDKDNVVNWEKIGKTRRPLNRRVK---- 87
Query: 2141 DTYTLIINSVYGVDADEYVCRAVNKGG-VKSTKAELIIMTAPKFNVPPRFRDTAYFESDV 2199
+ I N Y+C K G I P + +
Sbjct: 88 NGDLWIANYTSNDSHRRYLCTVTTKNGDCVQGIVRSHIRKPPSCIPET--YELGTHDKYG 145
Query: 2200 VVVVCVCF 2207
+ + C
Sbjct: 146 IDLYCGIL 153
Score = 41.4 bits (96), Expect = 0.002
Identities = 31/286 (10%), Positives = 82/286 (28%), Gaps = 35/286 (12%)
Query: 1329 FTVPDPPGQPQIVDWDTNNATLMWDRPRTDGGSKIQGYKMLLKTPTGELPTTIWSKIRPT 1388
P ++ + + W++ G + + G+L I +
Sbjct: 49 AKCPPIEDSLLSHRYNDKDNVVNWEK----IGKTRRPLNR--RVKNGDL--WIANYTSND 100
Query: 1389 SSTVY-CKDTTMNSSNSEPGKQSGPVIVEEQPNKPVMDLSGVRDITVKAGEDFSIHVPFM 1447
S Y C T+ + N + + + + P+ ++ ++ +
Sbjct: 101 SHRRYLC---TVTTKNGDCVQGIVRSHIRKPPSCIPET----YELGTHDKYGIDLYCGIL 153
Query: 1448 -AFPQPAAFWFANDSIIDDSDTRVHKQLTMNSASLVVKNSQRSDGGQYRLQLKNPAGFDT 1506
A W+ N+ + T+ + + +L++ N + D G+Y +
Sbjct: 154 YAKHYNNITWYKNNQELIIDGTKY----SQSGQNLIIHNPELEDSGRYDCYVHYDDVRIK 209
Query: 1507 ATLHSRLRTLPDSVNPRCHLPSSTSKERPKFPTHPNHQPWLKWARASLT--SKGVDSTED 1564
+ R +V P ++ A++T + D
Sbjct: 210 NDIVVS-RCKILTVIPS--------QDHRFKLILDPKINVTIGEPANITCTAVSTSLLVD 260
Query: 1565 SISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLK 1610
+ + W G I +++ I + + + + +
Sbjct: 261 DVLIDWEN---PSGWIIGLDFGVYSILTSSGGITEATLYFENVTEE 303
Score = 37.1 bits (85), Expect = 0.057
Identities = 18/140 (12%), Positives = 31/140 (22%), Gaps = 13/140 (9%)
Query: 1110 AVNAAGQGPWSSSSDIIMCCAPPCAPKITSDLSIRDMTVLAGEEFTITVPF-SGRPKPTP 1168
G + P C P ++ + +
Sbjct: 109 VTTKNGD-CVQGIVRSHIRKPPSCIP------ETYELGTHDKYGIDLYCGILYAKHYNNI 161
Query: 1169 IWTVNGDEVSPDGRIKFETSENQTIYRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYVV 1228
W N E+ DG ++ +N I + + DSG Y + V
Sbjct: 162 TWYKNNQELIIDGTKYSQSGQNLII---HNPELE-DSGRYDCYVHYDDVRIKNDIVVSRC 217
Query: 1229 DKPS-PPQGPLDVSDITPES 1247
+ P I
Sbjct: 218 KILTVIPSQDHRFKLILDPK 237
Score = 36.7 bits (84), Expect = 0.071
Identities = 10/92 (10%), Positives = 21/92 (22%), Gaps = 9/92 (9%)
Query: 1145 DMTVLAGEEFTITVPFSGRPKPTPI----WTVNGDEVSPDGRIKFETSENQTIYRN---- 1196
+ V GE IT W + + +
Sbjct: 237 KINVTIGEPANITCTAVSTSLLVDDVLIDWENPSGWIIGLDFGVYSILTSSGGITEATLY 296
Query: 1197 -KSAKRATDSGSYTIQLVNTVGSDSASCKVYV 1227
++ +YT + N + + V +
Sbjct: 297 FENVTEEYIGNTYTCRGHNYYFDKTLTTTVVL 328
Score = 34.8 bits (79), Expect = 0.29
Identities = 14/80 (17%), Positives = 28/80 (35%), Gaps = 4/80 (5%)
Query: 1428 GVRDITVKAGEDFSIHVPFMAFPQPAAFWFANDSIID---DSDTRVHKQLTMNSASLVVK 1484
G + GE FS P + + + D++++ TR + + L +
Sbjct: 35 GTMNDMAALGEPFSAKCPPIEDSLLSHRYNDKDNVVNWEKIGKTRRPLNRRVKNGDLWIA 94
Query: 1485 NSQRSD-GGQYRLQLKNPAG 1503
N +D +Y + G
Sbjct: 95 NYTSNDSHRRYLCTVTTKNG 114
Score = 33.6 bits (76), Expect = 0.77
Identities = 20/165 (12%), Positives = 46/165 (27%), Gaps = 14/165 (8%)
Query: 156 VDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMPNALYIPEGD---------NTKVKIF 206
+D + E +N + + K P + G+ +
Sbjct: 2 IDIENEITEFFNKMRDTLPAKDSKWLNPSCMFGGTMNDMAALGEPFSAKCPPIEDSLLSH 61
Query: 207 YAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGS-V 265
D+ V+ K G+ + +R + + + + Y ++ +G V
Sbjct: 62 RYNDKDNVVNWEKIGKTRRPLNRR----VKNGDLWIANYTSNDSHRRYLCTVTTKNGDCV 117
Query: 266 SGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVT 310
G +I P ++ K+ L+ +T
Sbjct: 118 QGIVRSHIRKPPSCIPETYELGTHDKYGIDLYCGILYAKHYNNIT 162
Score = 33.6 bits (76), Expect = 0.77
Identities = 20/165 (12%), Positives = 46/165 (27%), Gaps = 14/165 (8%)
Query: 1763 VDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMPNALYIPEGD---------NTKVKIF 1813
+D + E +N + + K P + G+ +
Sbjct: 2 IDIENEITEFFNKMRDTLPAKDSKWLNPSCMFGGTMNDMAALGEPFSAKCPPIEDSLLSH 61
Query: 1814 YAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGS-V 1872
D+ V+ K G+ + +R + + + + Y ++ +G V
Sbjct: 62 RYNDKDNVVNWEKIGKTRRPLNRR----VKNGDLWIANYTSNDSHRRYLCTVTTKNGDCV 117
Query: 1873 SGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVT 1917
G +I P ++ K+ L+ +T
Sbjct: 118 QGIVRSHIRKPPSCIPETYELGTHDKYGIDLYCGILYAKHYNNIT 162
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK,
ATP-binding, metal-binding, NUCL binding,
serine/threonine-protein kinase, transferase; 2.00A
{Homo sapiens} PDB: 3kn5_A
Length = 325
Score = 93.1 bits (232), Expect = 4e-20
Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 7/89 (7%)
Query: 813 IKTSSVYDHYDIL---EEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEID 869
+K S Y HYD+ + +G G+F + +C +K+ FA K I + +KEI
Sbjct: 1 MKDSPFYQHYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEIT 57
Query: 870 IMNQL-HHPKLINLHDAFEDDDEMVLIFE 897
+ HP ++ LH+ F D L+ E
Sbjct: 58 ALKLCEGHPNIVKLHEVFHDQLHTFLVME 86
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion;
2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Length = 184
Score = 89.3 bits (221), Expect = 4e-20
Identities = 35/183 (19%), Positives = 67/183 (36%), Gaps = 20/183 (10%)
Query: 101 VVPLGKLLTLQCEATGTPVPKC--RWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDN 158
V LG + L C + RWL+ G + E A + F +D
Sbjct: 9 VEDLGSKILLTCSLNDSATEVTGHRWLKGGVVLK-------EDALPGQKTEFKVDSDDQW 61
Query: 159 GDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGD-QPMEVSL 217
G+Y+C ++ +++ PPR+ + ++ +I EG+ + + +
Sbjct: 62 GEYSCVFLPEPM---GTANIQLHGPPRVKAVKSSEHINEGETAMLVCKSESVPPVTDWAW 118
Query: 218 TKNGRVVQ------SDDRFKFTVLDDYIIIFIKEI-RKEDAGDYTVNLSNSSGSVSGTFT 270
K S+ RF + + I+ + + D G Y N ++S GS T
Sbjct: 119 YKITDSEDKALMNGSESRFFVSSSQGRSELHIENLNMEADPGQYRCNGTSSKGSDQAIIT 178
Query: 271 INI 273
+ +
Sbjct: 179 LRV 181
Score = 89.3 bits (221), Expect = 4e-20
Identities = 35/183 (19%), Positives = 67/183 (36%), Gaps = 20/183 (10%)
Query: 1708 VVPLGKLLTLQCEATGTPVPKC--RWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDN 1765
V LG + L C + RWL+ G + E A + F +D
Sbjct: 9 VEDLGSKILLTCSLNDSATEVTGHRWLKGGVVLK-------EDALPGQKTEFKVDSDDQW 61
Query: 1766 GDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGD-QPMEVSL 1824
G+Y+C ++ +++ PPR+ + ++ +I EG+ + + +
Sbjct: 62 GEYSCVFLPEPM---GTANIQLHGPPRVKAVKSSEHINEGETAMLVCKSESVPPVTDWAW 118
Query: 1825 TKNGRVVQ------SDDRFKFTVLDDYIIIFIKEI-RKEDAGDYTVNLSNSSGSVSGTFT 1877
K S+ RF + + I+ + + D G Y N ++S GS T
Sbjct: 119 YKITDSEDKALMNGSESRFFVSSSQGRSELHIENLNMEADPGQYRCNGTSSKGSDQAIIT 178
Query: 1878 INI 1880
+ +
Sbjct: 179 LRV 181
Score = 87.0 bits (215), Expect = 2e-19
Identities = 27/191 (14%), Positives = 52/191 (27%), Gaps = 23/191 (12%)
Query: 486 PLRNANAIQNHNAQFQCTITGCPKPTIS--WLKGSREITPSARHHIFAEGDTYTLIINSV 543
+ C++ WLKG +
Sbjct: 4 TVFTTVEDLGSKILLTCSLNDSATEVTGHRWLKGGVVLKED-------ALPGQKTEFKVD 56
Query: 544 YGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGY 603
EY C + + + + + P+ GE ++
Sbjct: 57 SDDQWGEYSCVFLPEPMGTAN---IQLHGPPRVKAVKSSEHINE---GETAMLVCKSESV 110
Query: 604 PKP-KITWYRDNEVIE------SGGHFHVETSERHAILTIRDAS-NVDTAPYRVVAENDL 655
P WY+ + + S F V +S+ + L I + + D YR +
Sbjct: 111 PPVTDWAWYKITDSEDKALMNGSESRFFVSSSQGRSELHIENLNMEADPGQYRCNGTSSK 170
Query: 656 GMDSAIVKIQI 666
G D AI+ +++
Sbjct: 171 GSDQAIITLRV 181
Score = 63.9 bits (155), Expect = 2e-11
Identities = 19/100 (19%), Positives = 34/100 (34%), Gaps = 8/100 (8%)
Query: 89 EKPDFIVPLKDLVVPLGKLLTLQCEATGTP-VPKCRWLRNGREI------SSGARYRVET 141
P + G+ L C++ P V W + S +R+ V +
Sbjct: 82 GPPRVKAVKSSEHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKALMNGSESRFFVSS 141
Query: 142 AGGVFRLHFNEVT-DVDNGDYTCEAYNSVGFAHTSSRVKI 180
+ G LH + + D G Y C +S G +++
Sbjct: 142 SQGRSELHIENLNMEADPGQYRCNGTSSKGSDQAIITLRV 181
Score = 63.9 bits (155), Expect = 2e-11
Identities = 19/100 (19%), Positives = 34/100 (34%), Gaps = 8/100 (8%)
Query: 1696 EKPDFIVPLKDLVVPLGKLLTLQCEATGTP-VPKCRWLRNGREI------SSGARYRVET 1748
P + G+ L C++ P V W + S +R+ V +
Sbjct: 82 GPPRVKAVKSSEHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKALMNGSESRFFVSS 141
Query: 1749 AGGVFRLHFNEVT-DVDNGDYTCEAYNSVGFAHTSSRVKI 1787
+ G LH + + D G Y C +S G +++
Sbjct: 142 SQGRSELHIENLNMEADPGQYRCNGTSSKGSDQAIITLRV 181
Score = 62.7 bits (152), Expect = 6e-11
Identities = 22/141 (15%), Positives = 47/141 (33%), Gaps = 18/141 (12%)
Query: 443 IEGRQYEFRVYAQNEAGL-----SLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHN 497
+ G++ EF+V + ++ G + ++Q+ P P + + + +
Sbjct: 46 LPGQKTEFKVDSDDQWGEYSCVFLPEPMGTANIQLHGP-----PRVKAVKSSEHINEGET 100
Query: 498 AQFQCTITGCPKPT-ISWLKGSREITP------SARHHIFAEGDTYTLIINSV-YGVDAD 549
A C P T +W K + +R + + L I ++ D
Sbjct: 101 AMLVCKSESVPPVTDWAWYKITDSEDKALMNGSESRFFVSSSQGRSELHIENLNMEADPG 160
Query: 550 EYVCRAVNKGGVKSTKAELII 570
+Y C + G L +
Sbjct: 161 QYRCNGTSSKGSDQAIITLRV 181
Score = 62.7 bits (152), Expect = 6e-11
Identities = 22/141 (15%), Positives = 47/141 (33%), Gaps = 18/141 (12%)
Query: 2050 IEGRQYEFRVYAQNEAGL-----SLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHN 2104
+ G++ EF+V + ++ G + ++Q+ P P + + + +
Sbjct: 46 LPGQKTEFKVDSDDQWGEYSCVFLPEPMGTANIQLHGP-----PRVKAVKSSEHINEGET 100
Query: 2105 AQFQCTITGCPKPT-ISWLKGSREITP------SARHHIFAEGDTYTLIINSV-YGVDAD 2156
A C P T +W K + +R + + L I ++ D
Sbjct: 101 AMLVCKSESVPPVTDWAWYKITDSEDKALMNGSESRFFVSSSQGRSELHIENLNMEADPG 160
Query: 2157 EYVCRAVNKGGVKSTKAELII 2177
+Y C + G L +
Sbjct: 161 QYRCNGTSSKGSDQAIITLRV 181
Score = 55.4 bits (133), Expect = 2e-08
Identities = 12/116 (10%), Positives = 25/116 (21%), Gaps = 14/116 (12%)
Query: 2093 PLRNANAIQNHNAQFQCTITGCPKPTIS--WLKGSREITPSARHHIFAEGDTYTLIINSV 2150
+ C++ WLKG +
Sbjct: 4 TVFTTVEDLGSKILLTCSLNDSATEVTGHRWLKGGVVLKED-------ALPGQKTEFKVD 56
Query: 2151 YGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPRFRDTAYFESDVVVVVCVC 2206
EY C + + + + + P+ E + ++VC
Sbjct: 57 SDDQWGEYSCVFLPEPMGTAN---IQLHGPPRVKAVKSSEHIN--EGETAMLVCKS 107
Score = 43.9 bits (103), Expect = 2e-04
Identities = 17/100 (17%), Positives = 32/100 (32%), Gaps = 9/100 (9%)
Query: 1135 PKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPI-WTVNGDEVSP------DGRIKFET 1187
P++ + + GE + P T W D + R +
Sbjct: 84 PRVKAVK--SSEHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKALMNGSESRFFVSS 141
Query: 1188 SENQTIYRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYV 1227
S+ ++ ++ D G Y ++ GSD A + V
Sbjct: 142 SQGRSELHIENLNMEADPGQYRCNGTSSKGSDQAIITLRV 181
Score = 34.6 bits (79), Expect = 0.17
Identities = 22/150 (14%), Positives = 48/150 (32%), Gaps = 19/150 (12%)
Query: 1369 LLKTPTGELPTTIWSKIRPTSSTVY-CKDTTMNSSNSEPGKQSGPVIVEEQPNKPVMDLS 1427
+LK T + Y C + P + + +
Sbjct: 40 VLKEDALPGQKTEFKVDSDDQWGEYSCVFLPEPMGTANIQLHGPPRVKAVKSS------- 92
Query: 1428 GVRDITVKAGEDFSIHVPFMAFPQPAAF-WF-----ANDSIIDDSDTRVHKQLTMNSASL 1481
+ GE + + P + W+ + ++++ S++R + + L
Sbjct: 93 ----EHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKALMNGSESRFFVSSSQGRSEL 148
Query: 1482 VVKN-SQRSDGGQYRLQLKNPAGFDTATLH 1510
++N + +D GQYR + G D A +
Sbjct: 149 HIENLNMEADPGQYRCNGTSSKGSDQAIIT 178
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural
genomics, structural genomic consortium, SGC,
transferase; HET: ANP; 2.10A {Plasmodium berghei}
Length = 504
Score = 95.2 bits (237), Expect = 5e-20
Identities = 28/100 (28%), Positives = 43/100 (43%), Gaps = 13/100 (13%)
Query: 811 VDIKTSSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIP-------------VSH 857
V K + + Y + ++G+GA+G V C+E+ + A K I +
Sbjct: 27 VRKKEGKIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNI 86
Query: 858 NLEKELIRKEIDIMNQLHHPKLINLHDAFEDDDEMVLIFE 897
E I EI ++ L HP +I L D FED L+ E
Sbjct: 87 EKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTE 126
>1wfo_A Sidekick 2; FN3, cell adhesion, structural genomics, riken
structural genomics/proteomics initiative, RSGI; NMR
{Homo sapiens} SCOP: b.1.2.1
Length = 130
Score = 86.7 bits (215), Expect = 6e-20
Identities = 31/131 (23%), Positives = 42/131 (32%), Gaps = 6/131 (4%)
Query: 351 VMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQ 410
+ G G P PI ++ D P PP + +V V L W P G I
Sbjct: 3 SGSSGRIGDGSPSH--PPILERTLDDVPGPPMGILFPEVRTTSVRLIWQPPAAPNG-IIL 59
Query: 411 GYWIDKHEVGSDA-WQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNS 469
Y I + A V V + Q L Y FR+ AQ G + A
Sbjct: 60 AYQITHRLNTTTANTATVEVLAPSARQYTATGLKPESVYLFRITAQTRKGWGEAAEALVV 119
Query: 470 V--QIKDPMAA 478
+ P +
Sbjct: 120 TTEKRSGPSSG 130
Score = 86.7 bits (215), Expect = 6e-20
Identities = 31/131 (23%), Positives = 42/131 (32%), Gaps = 6/131 (4%)
Query: 1958 VMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQ 2017
+ G G P PI ++ D P PP + +V V L W P G I
Sbjct: 3 SGSSGRIGDGSPSH--PPILERTLDDVPGPPMGILFPEVRTTSVRLIWQPPAAPNG-IIL 59
Query: 2018 GYWIDKHEVGSDA-WQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNS 2076
Y I + A V V + Q L Y FR+ AQ G + A
Sbjct: 60 AYQITHRLNTTTANTATVEVLAPSARQYTATGLKPESVYLFRITAQTRKGWGEAAEALVV 119
Query: 2077 V--QIKDPMAA 2085
+ P +
Sbjct: 120 TTEKRSGPSSG 130
Score = 77.1 bits (190), Expect = 2e-16
Identities = 28/152 (18%), Positives = 47/152 (30%), Gaps = 34/152 (22%)
Query: 975 VMAENQYGLSKPALTIDPIKAKHPFDVPGAPGAPKGVDSTEDSISLVWSKPRHDGGSPIQ 1034
+ + G P+ PI + DVPG P + S+ L+W P G I
Sbjct: 3 SGSSGRIGDGSPSH--PPILERTLDDVPGPPMGILFPEVRTTSVRLIWQPPAAPNG-IIL 59
Query: 1035 RYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNR 1094
Y + RL + A++ + ++ +Y
Sbjct: 60 AYQITHRLNTTTAN-TATVEVLAPSARQY------------------------------T 88
Query: 1095 VTSLIENHEYEFRVCAVNAAGQGPWSSSSDII 1126
T L Y FR+ A G G + + +
Sbjct: 89 ATGLKPESVYLFRITAQTRKGWGEAAEALVVT 120
Score = 73.6 bits (181), Expect = 3e-15
Identities = 24/124 (19%), Positives = 44/124 (35%), Gaps = 8/124 (6%)
Query: 649 VVAENDLGM---DSAIVKIQ-ISDRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNY 704
+ +G + + + D P PP ++ S+ L+W+ P G I Y
Sbjct: 3 SGSSGRIGDGSPSHPPILERTLDDVPGPPMGILFPEVRTTSVRLIWQPPAAPNG-IILAY 61
Query: 705 IV---EKREHPMSSWIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLIT 761
+ ++ + V TGL P Y FR+ A+ G + + + T
Sbjct: 62 QITHRLNTTTANTATVEVLAPSARQYTATGLKPESVYLFRITAQTRKGWGEAAEALVVTT 121
Query: 762 TKDT 765
K +
Sbjct: 122 EKRS 125
Score = 71.7 bits (176), Expect = 1e-14
Identities = 31/130 (23%), Positives = 47/130 (36%), Gaps = 15/130 (11%)
Query: 1213 VNTVGSDSASCKVYVV----DKPSPPQGPLDVSDITPESCSLSWKPPLDDGGSPITNYVV 1268
+G S S + D P PP G + ++ S L W+PP G I Y +
Sbjct: 6 SGRIGDGSPSHPPILERTLDDVPGPPMG-ILFPEVRTTSVRLIWQPPAAPNG-IILAYQI 63
Query: 1269 EKYESATGFWSKLSSFVRSPA---YDVFGLETNRQYRFRVRAENQYGVSEPLELDNSITA 1325
+ T + + V +P+ Y GL+ Y FR+ A+ + G E E T
Sbjct: 64 -THRLNTTTANTATVEVLAPSARQYTATGLKPESVYLFRITAQTRKGWGEAAEALVVTT- 121
Query: 1326 KFPFTVPDPP 1335
P
Sbjct: 122 ----EKRSGP 127
Score = 69.0 bits (169), Expect = 1e-13
Identities = 25/109 (22%), Positives = 38/109 (34%), Gaps = 9/109 (8%)
Query: 275 GLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDI--SMPHWICISTTCH 332
+PGPP+G + E+ + L W PP G+ + Y + R +
Sbjct: 26 DVPGPPMG-ILFPEVRTTSVRLIWQPPAAPNGI-ILAYQITHRLNTTTANTATVEVLAPS 83
Query: 333 DTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPP 381
+ GL YLF + A G G E + +K S P
Sbjct: 84 ARQYTATGLKPESVYLFRITAQTRKGWGEAAEALVVTT-----EKRSGP 127
Score = 69.0 bits (169), Expect = 1e-13
Identities = 25/109 (22%), Positives = 38/109 (34%), Gaps = 9/109 (8%)
Query: 1882 GLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDI--SMPHWICISTTCH 1939
+PGPP+G + E+ + L W PP G+ + Y + R +
Sbjct: 26 DVPGPPMG-ILFPEVRTTSVRLIWQPPAAPNGI-ILAYQITHRLNTTTANTATVEVLAPS 83
Query: 1940 DTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPP 1988
+ GL YLF + A G G E + +K S P
Sbjct: 84 ARQYTATGLKPESVYLFRITAQTRKGWGEAAEALVVTT-----EKRSGP 127
Score = 62.4 bits (152), Expect = 2e-11
Identities = 22/93 (23%), Positives = 34/93 (36%), Gaps = 3/93 (3%)
Query: 900 DRPHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVE-KKDYNSTVWTKVSSYVTTP 958
D P PP + E S+ L W PP G I Y + + + + V +
Sbjct: 26 DVPGPPMGILFPEVRTTSVRLIWQPPAAPNG-IILAYQITHRLNTTTANTATVEVLAPSA 84
Query: 959 F-VRVRNLAIGSTYEFRVMAENQYGLSKPALTI 990
L S Y FR+ A+ + G + A +
Sbjct: 85 RQYTATGLKPESVYLFRITAQTRKGWGEAAEAL 117
Score = 46.2 bits (110), Expect = 8e-06
Identities = 17/87 (19%), Positives = 28/87 (32%), Gaps = 4/87 (4%)
Query: 1307 AENQYGVSEPLELDNSITAKFPFTVPDPPGQPQIVDWDTNNATLMWDRPRTDGGSKIQGY 1366
+ + G P I + VP PP + T + L+W P G I Y
Sbjct: 5 SSGRIGDGSPSH--PPILERTLDDVPGPPMGILFPEVRTTSVRLIWQPPAAPNG-IILAY 61
Query: 1367 KMLLKTPTGELPTTIWSKIRPTSSTVY 1393
+ + T ++ S+ Y
Sbjct: 62 Q-ITHRLNTTTANTATVEVLAPSARQY 87
Score = 42.0 bits (99), Expect = 3e-04
Identities = 19/131 (14%), Positives = 29/131 (22%), Gaps = 48/131 (36%)
Query: 1559 VDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEG 1618
+ S+ L+W P G I Y + RL +
Sbjct: 37 PEVRTTSVRLIWQPPAAPNG-IILAYQITHRLNTTTAN---------------------- 73
Query: 1619 KSIGSERGSTAQFLEREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKS 1678
++ L + Y FRI A G
Sbjct: 74 ----------------------TATVEVLAPSARQYTATGLKPESVYLFRITAQTRKGWG 111
Query: 1679 EPS---ICTTP 1686
E + + TT
Sbjct: 112 EAAEALVVTTE 122
Score = 38.5 bits (90), Expect = 0.005
Identities = 13/62 (20%), Positives = 18/62 (29%), Gaps = 4/62 (6%)
Query: 22 YIIERREVGGAI-WLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPS---ICT 77
Y I R ++ L + Y FRI A G E + + T
Sbjct: 61 YQITHRLNTTTANTATVEVLAPSARQYTATGLKPESVYLFRITAQTRKGWGEAAEALVVT 120
Query: 78 TP 79
T
Sbjct: 121 TE 122
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein
complex, growth factor-receptor complex, TRA hormone
complex; HET: NDG NAG; 2.30A {Homo sapiens}
Length = 289
Score = 90.9 bits (225), Expect = 1e-19
Identities = 43/301 (14%), Positives = 75/301 (24%), Gaps = 41/301 (13%)
Query: 379 SPPGIPVVTQVGGDFV-------NLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAI 431
+PPG +V V FV + W++ Q + S
Sbjct: 4 TPPGPELVLNVSSTFVLTCSGSAPVVWERM---SQEPPQEMAKAQDGTFS---------- 50
Query: 432 CAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNAN 491
S + + NL E+ + GL + + DP P
Sbjct: 51 ---SVLTLTNLTGLDTGEYFCTHNDSRGLETDERKRLYIFVPDPTVGFLPNDAEE-LFIF 106
Query: 492 AIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEY 551
+ C +T P+ ++ + ++ Y + Y
Sbjct: 107 LTEITEITIPCRVTD-PQLVVTLHEKKGDVALPV---------PYDHQRGFSGIFEDRSY 156
Query: 552 VCRAVNKGG-VKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITW 610
+C+ V S + + NV T +GEN+ + G W
Sbjct: 157 ICKTTIGDREVDSDAYYVYRLQVSSINVSVNAVQTVV-RQGENITLMCIVIGNEVVNFEW 215
Query: 611 YRDNEVIESG-----GHFHVETSERHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQ 665
+ +IL I A D+ Y + I
Sbjct: 216 TYPRKESGRLVEPVTDFLLDMPYHIRSILHIPSAELEDSGTYTCNVTESVNDHQDEKAIN 275
Query: 666 I 666
I
Sbjct: 276 I 276
Score = 71.3 bits (174), Expect = 4e-13
Identities = 30/234 (12%), Positives = 62/234 (26%), Gaps = 25/234 (10%)
Query: 59 EFRIIAVNAIGKSEPSICTTPVKICEFVGGEKPDFIVPLKD---LVVPLGKLLTLQCEAT 115
E+ ++ G + FV F+ + + + +T+ C T
Sbjct: 65 EYFCTHNDSRGLETDERKRLYI----FVPDPTVGFLPNDAEELFIFLTEITEITIPCRVT 120
Query: 116 GTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTS 175
P +++ Y ++ Y C+ +
Sbjct: 121 D-PQLVVTLHEKKGDVALPVPYD---------HQRGFSGIFEDRSYICKTTIGDREVDSD 170
Query: 176 SR---VKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKF 232
+ + + + +G+N + G++ + T +
Sbjct: 171 AYYVYRLQVSSINVSVNAVQTVVRQGENITLMCIVIGNEVVNFEWTYPRKESGRLVEPVT 230
Query: 233 TVLDDYIIIF-----IKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPI 281
L D I ED+G YT N++ S INIT +
Sbjct: 231 DFLLDMPYHIRSILHIPSAELEDSGTYTCNVTESVNDHQDEKAINITVVESGHH 284
Score = 71.3 bits (174), Expect = 4e-13
Identities = 30/234 (12%), Positives = 62/234 (26%), Gaps = 25/234 (10%)
Query: 1666 EFRIIAVNAIGKSEPSICTTPVKICEFVGGEKPDFIVPLKD---LVVPLGKLLTLQCEAT 1722
E+ ++ G + FV F+ + + + +T+ C T
Sbjct: 65 EYFCTHNDSRGLETDERKRLYI----FVPDPTVGFLPNDAEELFIFLTEITEITIPCRVT 120
Query: 1723 GTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTS 1782
P +++ Y ++ Y C+ +
Sbjct: 121 D-PQLVVTLHEKKGDVALPVPYD---------HQRGFSGIFEDRSYICKTTIGDREVDSD 170
Query: 1783 SR---VKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKF 1839
+ + + + +G+N + G++ + T +
Sbjct: 171 AYYVYRLQVSSINVSVNAVQTVVRQGENITLMCIVIGNEVVNFEWTYPRKESGRLVEPVT 230
Query: 1840 TVLDDYIIIF-----IKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPI 1888
L D I ED+G YT N++ S INIT +
Sbjct: 231 DFLLDMPYHIRSILHIPSAELEDSGTYTCNVTESVNDHQDEKAINITVVESGHH 284
Score = 67.0 bits (163), Expect = 9e-12
Identities = 29/198 (14%), Positives = 52/198 (26%), Gaps = 21/198 (10%)
Query: 1603 HIPDTSLKYVLWVSEGKSIGSERGSTAQFLEREVGG----AIWLKCNDYNVLECSF---- 1654
+PD ++ ++ +E I + + V + L +
Sbjct: 87 FVPDPTVGFLPNDAEELFIFLTEITEI-TIPCRVTDPQLVVTLHEKKGDVALPVPYDHQR 145
Query: 1655 SVLNLVEGNDYEFRIIAVNAIGKSEPSICTTPVKICEFVGGEKPDFIVPLKDLVVPLGKL 1714
+ E Y + + + + + V VV G+
Sbjct: 146 GFSGIFEDRSYICK--TTIGDREVDSDAYYVYR-----LQVSSINVSVNAVQTVVRQGEN 198
Query: 1715 LTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFR-----LHFNEVTDVDNGDYT 1769
+TL C G V W +E + + LH D+G YT
Sbjct: 199 ITLMCIVIGNEVVNFEWTYPRKESGRLVEPVTDFLLDMPYHIRSILHIPSAELEDSGTYT 258
Query: 1770 CEAYNSVGFAHTSSRVKI 1787
C SV + I
Sbjct: 259 CNVTESVNDHQDEKAINI 276
Score = 66.6 bits (162), Expect = 2e-11
Identities = 24/157 (15%), Positives = 39/157 (24%), Gaps = 16/157 (10%)
Query: 33 IWLKCNDYNVLECSF----SVLNLVEGNDYEFRIIAVNAIGKSEPSICTTPVKICEFVGG 88
+ L + + E Y + + + +
Sbjct: 127 TLHEKKGDVALPVPYDHQRGFSGIFEDRSYICK--TTIGDREVDSDAYYVYR-----LQV 179
Query: 89 EKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFR- 147
+ V VV G+ +TL C G V W +E + +
Sbjct: 180 SSINVSVNAVQTVVRQGENITLMCIVIGNEVVNFEWTYPRKESGRLVEPVTDFLLDMPYH 239
Query: 148 ----LHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKI 180
LH D+G YTC SV + I
Sbjct: 240 IRSILHIPSAELEDSGTYTCNVTESVNDHQDEKAINI 276
Score = 64.3 bits (156), Expect = 8e-11
Identities = 29/223 (13%), Positives = 57/223 (25%), Gaps = 30/223 (13%)
Query: 94 IVPLKD-LVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNE 152
+ P LV+ + L C + W R +E + + L
Sbjct: 3 VTPPGPELVLNVSSTFVLTCSGSAPV----VWERMSQEPPQE-MAKAQDGTFSSVLTLTN 57
Query: 153 VTDVDNGDYTCEAYNSVGFAHTSSR---VKIGTPPR----IDRMPNALYIPEGDNTKVKI 205
+T +D G+Y C +S G + + + P D +++ E +
Sbjct: 58 LTGLDTGEYFCTHNDSRGLETDERKRLYIFVPDPTVGFLPNDAEELFIFLTEITEITIPC 117
Query: 206 FYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSV 265
D + V+L + V D+ F + Y + V
Sbjct: 118 R-VTDPQLVVTLHEK------KGDVALPVPYDHQRGFSG---IFEDRSYICKTTIGDREV 167
Query: 266 SGTFTINITGLPGPPIGPLDVSEITKH-------TCTLHWNPP 301
++ + C + N
Sbjct: 168 DSDAYYVYRLQVSSINVSVNAVQTVVRQGENITLMCIVIGNEV 210
Score = 64.3 bits (156), Expect = 8e-11
Identities = 29/223 (13%), Positives = 57/223 (25%), Gaps = 30/223 (13%)
Query: 1701 IVPLKD-LVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNE 1759
+ P LV+ + L C + W R +E + + L
Sbjct: 3 VTPPGPELVLNVSSTFVLTCSGSAPV----VWERMSQEPPQE-MAKAQDGTFSSVLTLTN 57
Query: 1760 VTDVDNGDYTCEAYNSVGFAHTSSR---VKIGTPPR----IDRMPNALYIPEGDNTKVKI 1812
+T +D G+Y C +S G + + + P D +++ E +
Sbjct: 58 LTGLDTGEYFCTHNDSRGLETDERKRLYIFVPDPTVGFLPNDAEELFIFLTEITEITIPC 117
Query: 1813 FYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSV 1872
D + V+L + V D+ F + Y + V
Sbjct: 118 R-VTDPQLVVTLHEK------KGDVALPVPYDHQRGFSG---IFEDRSYICKTTIGDREV 167
Query: 1873 SGTFTINITGLPGPPIGPLDVSEITKH-------TCTLHWNPP 1908
++ + C + N
Sbjct: 168 DSDAYYVYRLQVSSINVSVNAVQTVVRQGENITLMCIVIGNEV 210
Score = 62.8 bits (152), Expect = 3e-10
Identities = 21/141 (14%), Positives = 34/141 (24%), Gaps = 12/141 (8%)
Query: 2042 SQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQ 2101
Q + E R Y + + S A +++ + + V Q
Sbjct: 143 HQRGFSGIFEDRSYICK--TTIGDR-EVDSDAYYVYRLQVS----SINVSVNAVQTVVRQ 195
Query: 2102 NHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTY-----TLIINSVYGVDAD 2156
N C + G W +E D L I S D+
Sbjct: 196 GENITLMCIVIGNEVVNFEWTYPRKESGRLVEPVTDFLLDMPYHIRSILHIPSAELEDSG 255
Query: 2157 EYVCRAVNKGGVKSTKAELII 2177
Y C + + I
Sbjct: 256 TYTCNVTESVNDHQDEKAINI 276
Score = 62.4 bits (151), Expect = 3e-10
Identities = 31/227 (13%), Positives = 61/227 (26%), Gaps = 35/227 (15%)
Query: 1986 SPPGIPVVTQVGGDFV-------NLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAI 2038
+PPG +V V FV + W++ Q + S
Sbjct: 4 TPPGPELVLNVSSTFVLTCSGSAPVVWERM---SQEPPQEMAKAQDGTFS---------- 50
Query: 2039 CAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNAN 2098
S + + NL E+ + GL + + DP P
Sbjct: 51 ---SVLTLTNLTGLDTGEYFCTHNDSRGLETDERKRLYIFVPDPTVGFLPNDAEE-LFIF 106
Query: 2099 AIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEY 2158
+ C +T P+ ++ + ++ Y + Y
Sbjct: 107 LTEITEITIPCRVTD-PQLVVTLHEKKGDVALPV---------PYDHQRGFSGIFEDRSY 156
Query: 2159 VCRAVNKGG-VKSTKAELIIMTAPKFNVPPRFRDTAYFESDVVVVVC 2204
+C+ V S + + NV T + + + ++C
Sbjct: 157 ICKTTIGDREVDSDAYYVYRLQVSSINVSVNAVQTVVRQGENITLMC 203
Score = 45.5 bits (107), Expect = 1e-04
Identities = 21/143 (14%), Positives = 41/143 (28%), Gaps = 13/143 (9%)
Query: 1095 VTSLIENHEYEFRVCAVNAAGQGPWSSSSDIIMCCAPPCAPKITSDLSIRDMTVLAGEEF 1154
+ + E+ Y +C + S + + + + V GE
Sbjct: 147 FSGIFEDRSY---ICKTTIGDREVDSDAYYVYRLQVSSINVSVNAV----QTVVRQGENI 199
Query: 1155 TITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQTIYRNK----SAKRATDSGSYTI 1210
T+ G WT E + + + + DSG+YT
Sbjct: 200 TLMCIVIGNEVVNFEWTYPRKESGRLVEPVTDFLLDMPYHIRSILHIPSAELEDSGTYTC 259
Query: 1211 QLVNTVG--SDSASCKVYVVDKP 1231
+ +V D + + VV+
Sbjct: 260 NVTESVNDHQDEKAINITVVESG 282
Score = 44.3 bits (104), Expect = 3e-04
Identities = 10/111 (9%), Positives = 28/111 (25%), Gaps = 4/111 (3%)
Query: 1402 SNSEPGKQSGPVIVEEQPNKPVMDLSGVRDITVKAGEDFSIHVPFMAFPQPAAFWFANDS 1461
+ + S V + V+ GE+ ++ + W
Sbjct: 161 TIGDREVDSDAYYVYRLQVSSINVSVNAVQTVVRQGENITLMCIVIGNEVVNFEWTYPRK 220
Query: 1462 ----IIDDSDTRVHKQLTMNSASLVVKNSQRSDGGQYRLQLKNPAGFDTAT 1508
+++ + + L + +++ D G Y +
Sbjct: 221 ESGRLVEPVTDFLLDMPYHIRSILHIPSAELEDSGTYTCNVTESVNDHQDE 271
Score = 38.9 bits (90), Expect = 0.013
Identities = 10/93 (10%), Positives = 26/93 (27%), Gaps = 9/93 (9%)
Query: 1145 DMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQTIYRNKSAKRATD 1204
++ + F +T +W E + + + + + D
Sbjct: 9 ELVLNVSSTFVLT----CSGSAPVVWERMSQEPPQEMAKAQDGTFSSVLTLTNL--TGLD 62
Query: 1205 SGSYTIQLVNTVGSD---SASCKVYVVDKPSPP 1234
+G Y ++ G + ++V D
Sbjct: 63 TGEYFCTHNDSRGLETDERKRLYIFVPDPTVGF 95
Score = 37.4 bits (86), Expect = 0.046
Identities = 24/235 (10%), Positives = 54/235 (22%), Gaps = 33/235 (14%)
Query: 1064 VLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVC-AVNAAGQGPWSSS 1122
V+W + E ++ + N + ++ EY C ++ G
Sbjct: 28 VVWERMSQEPPQEMAKAQDGTFSSVLTLTN--LTGLDTGEY---FCTHNDSRGLET-DER 81
Query: 1123 SDIIMCCAPPCAPKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGR 1182
+ + P + +D + + E TI + P+ G
Sbjct: 82 KRLYIFVPDPTVGFLPNDAEELFIFLTEITEITIPCRVTD-PQLVVTLH------EKKGD 134
Query: 1183 IKFETSENQTIYRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYVVDKPSPPQGPLDVSD 1242
+ + + + SY + + + S ++
Sbjct: 135 VALPVPYD----HQRGFSGIFEDRSYICKTTIGDREVDSDAYYVYRLQVSSINVSVNAVQ 190
Query: 1243 ITPE-------SCS--------LSWKPPLDDGGSPITNYVVEKYESATGFWSKLS 1282
C W P + G + + S L
Sbjct: 191 TVVRQGENITLMCIVIGNEVVNFEWTYPRKESGRLVEPVTDFLLDMPYHIRSILH 245
Score = 32.0 bits (72), Expect = 2.2
Identities = 12/101 (11%), Positives = 24/101 (23%), Gaps = 6/101 (5%)
Query: 1431 DITVKAGEDFSIHVPFMAFPQPAAFWFANDSIIDDSDTRVHKQLTMNSASLVVKNSQRSD 1490
++ + F + W + S+ L + N D
Sbjct: 9 ELVLNVSSTFVLTC----SGSAPVVWERMSQEPPQEMAKAQDGTF--SSVLTLTNLTGLD 62
Query: 1491 GGQYRLQLKNPAGFDTATLHSRLRTLPDSVNPRCHLPSSTS 1531
G+Y + G +T +PD +
Sbjct: 63 TGEYFCTHNDSRGLETDERKRLYIFVPDPTVGFLPNDAEEL 103
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell
adhesion molecule, immunoglobuline superfamily,
alternative splicing, cell adhesion; 2.19A {Mus
musculus} PDB: 3mj7_B* 2npl_X
Length = 214
Score = 88.6 bits (219), Expect = 1e-19
Identities = 33/214 (15%), Positives = 71/214 (33%), Gaps = 34/214 (15%)
Query: 482 EIIVPLRNANAIQNHNAQFQCTITGCPKPT----ISWLKGSREITPSARHHIFAEGDTY- 536
I P + + A C T P+ I WL + + I GD
Sbjct: 2 SITTPEQRIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPSDNQIVDQVIILYSGDKIY 61
Query: 537 -----------------------TLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTA 573
++ + ++ D Y C+ GV + K L ++
Sbjct: 62 DNYYPDLKGRVHFTSNDVKSGDASINVTNLQLSDIGTYQCKVKKAPGVANKKFLLTVLVK 121
Query: 574 PKFNVPPRFRDTAYFDKGENVVVK-IPFTGYPKPKITWYRDNEVIESGGHFHVETSERHA 632
P R + G + +K P G + W + ++ + E +
Sbjct: 122 PSG---TRCFVDGSEEIGNDFKLKCEPKEGSLPLQFEWQKLSDSQTMPTPWLAEMT--SP 176
Query: 633 ILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQI 666
++++++AS+ + Y +N +G D ++++ +
Sbjct: 177 VISVKNASSEYSGTYSCTVQNRVGSDQCMLRLDV 210
Score = 80.1 bits (197), Expect = 1e-16
Identities = 33/211 (15%), Positives = 64/211 (30%), Gaps = 31/211 (14%)
Query: 94 IVPLKDLVVPLGKLLTLQCEATGTPVPKC----RWLRNGREISSG--------------- 134
P + + G+ L C+ T +P + WL + +
Sbjct: 4 TTPEQRIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPSDNQIVDQVIILYSGDKIYDN 63
Query: 135 ----ARYRVETAG-----GVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPR 185
+ RV G ++ + D G Y C+ + G A+ + + P
Sbjct: 64 YYPDLKGRVHFTSNDVKSGDASINVTNLQLSDIGTYQCKVKKAPGVANKKFLLTVLVKPS 123
Query: 186 IDRMPNALYIPEGDNTKVK-IFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIK 244
R G++ K+K G P++ K + + I +K
Sbjct: 124 GTRCFVDGSEEIGNDFKLKCEPKEGSLPLQFEWQKLSDSQTMPTPWLAEMTSPVIS--VK 181
Query: 245 EIRKEDAGDYTVNLSNSSGSVSGTFTINITG 275
E +G Y+ + N GS +++
Sbjct: 182 NASSEYSGTYSCTVQNRVGSDQCMLRLDVVP 212
Score = 80.1 bits (197), Expect = 1e-16
Identities = 33/211 (15%), Positives = 64/211 (30%), Gaps = 31/211 (14%)
Query: 1701 IVPLKDLVVPLGKLLTLQCEATGTPVPKC----RWLRNGREISSG--------------- 1741
P + + G+ L C+ T +P + WL + +
Sbjct: 4 TTPEQRIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPSDNQIVDQVIILYSGDKIYDN 63
Query: 1742 ----ARYRVETAG-----GVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPR 1792
+ RV G ++ + D G Y C+ + G A+ + + P
Sbjct: 64 YYPDLKGRVHFTSNDVKSGDASINVTNLQLSDIGTYQCKVKKAPGVANKKFLLTVLVKPS 123
Query: 1793 IDRMPNALYIPEGDNTKVK-IFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIK 1851
R G++ K+K G P++ K + + I +K
Sbjct: 124 GTRCFVDGSEEIGNDFKLKCEPKEGSLPLQFEWQKLSDSQTMPTPWLAEMTSPVIS--VK 181
Query: 1852 EIRKEDAGDYTVNLSNSSGSVSGTFTINITG 1882
E +G Y+ + N GS +++
Sbjct: 182 NASSEYSGTYSCTVQNRVGSDQCMLRLDVVP 212
Score = 73.6 bits (180), Expect = 2e-14
Identities = 20/97 (20%), Positives = 33/97 (34%), Gaps = 4/97 (4%)
Query: 89 EKPDFIVPLKDLVVPLGKLLTLQCEAT-GTPVPKCRWLRNGREISSGARYRVETAGGVFR 147
KP D +G L+CE G+ + W + + + E V
Sbjct: 120 VKPSGTRCFVDGSEEIGNDFKLKCEPKEGSLPLQFEWQKLSDSQTMPTPWLAEMTSPV-- 177
Query: 148 LHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPP 184
+ + +G Y+C N VG R+ + PP
Sbjct: 178 ISVKNASSEYSGTYSCTVQNRVGSDQCMLRLDV-VPP 213
Score = 73.6 bits (180), Expect = 2e-14
Identities = 20/97 (20%), Positives = 33/97 (34%), Gaps = 4/97 (4%)
Query: 1696 EKPDFIVPLKDLVVPLGKLLTLQCEAT-GTPVPKCRWLRNGREISSGARYRVETAGGVFR 1754
KP D +G L+CE G+ + W + + + E V
Sbjct: 120 VKPSGTRCFVDGSEEIGNDFKLKCEPKEGSLPLQFEWQKLSDSQTMPTPWLAEMTSPV-- 177
Query: 1755 LHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPP 1791
+ + +G Y+C N VG R+ + PP
Sbjct: 178 ISVKNASSEYSGTYSCTVQNRVGSDQCMLRLDV-VPP 213
Score = 63.9 bits (155), Expect = 5e-11
Identities = 23/187 (12%), Positives = 48/187 (25%), Gaps = 20/187 (10%)
Query: 395 NLSWDKPLDDGGSRIQGYWI-----DKHEVGSDAWQRVNVAICAPSQ----INIPNLIEG 445
++ W D Q + D RV+ IN+ NL
Sbjct: 35 DIEWLISPSDNQIVDQVIILYSGDKIYDNYYPDLKGRVHFTSNDVKSGDASINVTNLQLS 94
Query: 446 RQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTIT 505
++ + G ++ + + P + + ++ + +C
Sbjct: 95 DIGTYQCKVKKAPG---VANKKFLLTVLVK-----PSGTRCFVDGSEEIGNDFKLKCEPK 146
Query: 506 -GCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKST 564
G W K S T + + + + Y C N+ G
Sbjct: 147 EGSLPLQFEWQKLSDSQTMPTPWLAEMTSPV--ISVKNASSEYSGTYSCTVQNRVGSDQC 204
Query: 565 KAELIIM 571
L ++
Sbjct: 205 MLRLDVV 211
Score = 63.9 bits (155), Expect = 5e-11
Identities = 23/187 (12%), Positives = 48/187 (25%), Gaps = 20/187 (10%)
Query: 2002 NLSWDKPLDDGGSRIQGYWI-----DKHEVGSDAWQRVNVAICAPSQ----INIPNLIEG 2052
++ W D Q + D RV+ IN+ NL
Sbjct: 35 DIEWLISPSDNQIVDQVIILYSGDKIYDNYYPDLKGRVHFTSNDVKSGDASINVTNLQLS 94
Query: 2053 RQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTIT 2112
++ + G ++ + + P + + ++ + +C
Sbjct: 95 DIGTYQCKVKKAPG---VANKKFLLTVLVK-----PSGTRCFVDGSEEIGNDFKLKCEPK 146
Query: 2113 -GCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKST 2171
G W K S T + + + + Y C N+ G
Sbjct: 147 EGSLPLQFEWQKLSDSQTMPTPWLAEMTSPV--ISVKNASSEYSGTYSCTVQNRVGSDQC 204
Query: 2172 KAELIIM 2178
L ++
Sbjct: 205 MLRLDVV 211
Score = 54.3 bits (130), Expect = 7e-08
Identities = 22/144 (15%), Positives = 39/144 (27%), Gaps = 30/144 (20%)
Query: 2089 EIIVPLRNANAIQNHNAQFQCTITGCPKPT----ISWLKGSREITPSARHHIFAEGDTY- 2143
I P + + A C T P+ I WL + + I GD
Sbjct: 2 SITTPEQRIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPSDNQIVDQVIILYSGDKIY 61
Query: 2144 -----------------------TLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTA 2180
++ + ++ D Y C+ GV + K L ++
Sbjct: 62 DNYYPDLKGRVHFTSNDVKSGDASINVTNLQLSDIGTYQCKVKKAPGVANKKFLLTVLVK 121
Query: 2181 PKFNVPPRFRDTAYFESDVVVVVC 2204
P D + + + C
Sbjct: 122 PSGTRCF--VDGSEEIGNDFKLKC 143
Score = 44.7 bits (105), Expect = 1e-04
Identities = 16/111 (14%), Positives = 34/111 (30%), Gaps = 9/111 (8%)
Query: 196 PEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYT 255
+ + + ++ GRV + + V I + ++ D G Y
Sbjct: 45 NQIVDQVIILYSGDKIYDNYYPDLKGRVHFTSND----VKSGDASINVTNLQLSDIGTYQ 100
Query: 256 VNLSNSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLH-----WNPP 301
+ + G + F + + P +D SE + L + P
Sbjct: 101 CKVKKAPGVANKKFLLTVLVKPSGTRCFVDGSEEIGNDFKLKCEPKEGSLP 151
Score = 44.7 bits (105), Expect = 1e-04
Identities = 16/111 (14%), Positives = 34/111 (30%), Gaps = 9/111 (8%)
Query: 1803 PEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYT 1862
+ + + ++ GRV + + V I + ++ D G Y
Sbjct: 45 NQIVDQVIILYSGDKIYDNYYPDLKGRVHFTSND----VKSGDASINVTNLQLSDIGTYQ 100
Query: 1863 VNLSNSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLH-----WNPP 1908
+ + G + F + + P +D SE + L + P
Sbjct: 101 CKVKKAPGVANKKFLLTVLVKPSGTRCFVDGSEEIGNDFKLKCEPKEGSLP 151
Score = 40.8 bits (95), Expect = 0.002
Identities = 24/159 (15%), Positives = 47/159 (29%), Gaps = 41/159 (25%)
Query: 1146 MTVLAGEEFTITVPFSGRPKPTPIWTV-------------------NGDEVSPD------ 1180
+ GE + F+ P+ + +GD++ +
Sbjct: 10 IEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPSDNQIVDQVIILYSGDKIYDNYYPDLK 69
Query: 1181 GRIKFETSENQTIYRNKSAK----RATDSGSYTIQLVNTVGSDSASCKVYVVDKPSPPQG 1236
GR+ F + N + S + +D G+Y ++ G + + V+ KPS +
Sbjct: 70 GRVHF--TSNDVKSGDASINVTNLQLSDIGTYQCKVKKAPGVANKKFLLTVLVKPSGTRC 127
Query: 1237 PLDVS-----DITPESCSLSWKPP-----LDDGGSPITN 1265
+D S D + P S
Sbjct: 128 FVDGSEEIGNDFKLKCEPKEGSLPLQFEWQKLSDSQTMP 166
Score = 39.7 bits (92), Expect = 0.005
Identities = 23/104 (22%), Positives = 36/104 (34%), Gaps = 10/104 (9%)
Query: 1130 APPCAPKITSDLSIRDMTVLAGEEFTIT-VPFSGRPKPTPIWTVNGDEVSPDGRIKFETS 1188
P + D + G +F + P G W D + E +
Sbjct: 120 VKPSGTRCFVD-----GSEEIGNDFKLKCEPKEGSLPLQFEWQKLSDSQTMPTPWLAEMT 174
Query: 1189 ENQTIYRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYVVDKPS 1232
+N S+ SG+Y+ + N VGSD ++ VV PS
Sbjct: 175 SPVISVKNASS---EYSGTYSCTVQNRVGSDQCMLRLDVVP-PS 214
Score = 37.7 bits (87), Expect = 0.020
Identities = 19/99 (19%), Positives = 31/99 (31%), Gaps = 8/99 (8%)
Query: 1413 VIVEEQPNKPVMDLSGVRDITVKAGEDFSIH-VPFMAFPQPAAFWFANDSIIDDSDTRVH 1471
+ V +P+ + D + + G DF + P W +
Sbjct: 116 LTVLVKPSGTRCFV----DGSEEIGNDFKLKCEPKEGSLPLQFEWQKLSDSQTMPTPWLA 171
Query: 1472 KQLTMNSASLVVKNSQRSDGGQYRLQLKNPAGFDTATLH 1510
M S + VKN+ G Y ++N G D L
Sbjct: 172 ---EMTSPVISVKNASSEYSGTYSCTVQNRVGSDQCMLR 207
Score = 37.7 bits (87), Expect = 0.025
Identities = 17/125 (13%), Positives = 36/125 (28%), Gaps = 30/125 (24%)
Query: 590 KGENVVVKIPFTGYPKPK----ITWYRDNEVIESGGHFHV-------------------- 625
KGE + FT P+ + I W + +
Sbjct: 14 KGETAYLPCKFTLSPEDQGPLDIEWLISPSDNQIVDQVIILYSGDKIYDNYYPDLKGRVH 73
Query: 626 ----ETSERHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQISDRPDPPQFP--TVE 679
+ A + + + D Y+ + G+ + + + +P + E
Sbjct: 74 FTSNDVKSGDASINVTNLQLSDIGTYQCKVKKAPGVANKKFLLTVLVKPSGTRCFVDGSE 133
Query: 680 DIGHD 684
+IG+D
Sbjct: 134 EIGND 138
Score = 36.2 bits (83), Expect = 0.080
Identities = 20/75 (26%), Positives = 28/75 (37%), Gaps = 5/75 (6%)
Query: 1460 DSIIDDSDTRVH---KQLTMNSASLVVKNSQRSDGGQYRLQLKNPAGFDTATLHSRLRTL 1516
D+ D RVH + AS+ V N Q SD G Y+ ++K G +
Sbjct: 62 DNYYPDLKGRVHFTSNDVKSGDASINVTNLQLSDIGTYQCKVKKAPGVANKKFLLTVLVK 121
Query: 1517 PDSVNPRCHLPSSTS 1531
P RC + S
Sbjct: 122 PSG--TRCFVDGSEE 134
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase,
FHA domain, ATP-binding, cell cycle, mutation,
LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens}
PDB: 3i6w_A
Length = 419
Score = 92.8 bits (231), Expect = 1e-19
Identities = 25/107 (23%), Positives = 46/107 (42%), Gaps = 9/107 (8%)
Query: 792 VSDYDQYVFDIYSKYVPQPVDIKTSSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAK 851
+S VF ++ + ++ D Y + + +G+GA G V ERKT A +
Sbjct: 108 LSLSRNKVF-VFFDLTVDDQSVYPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIR 166
Query: 852 FIP--------VSHNLEKELIRKEIDIMNQLHHPKLINLHDAFEDDD 890
I + EI+I+ +L+HP +I + + F+ +D
Sbjct: 167 IISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED 213
>2k1m_A Myosin-binding protein C, cardiac-type; IG-I domain, cardiac
muscle, hypertrophic cardiomyopathy, actin-binding, cell
adhesion, disease mutation; NMR {Homo sapiens}
Length = 95
Score = 84.3 bits (209), Expect = 2e-19
Identities = 19/96 (19%), Positives = 32/96 (33%), Gaps = 5/96 (5%)
Query: 475 PMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGD 534
P R+ A F+ + W +G +I+ S ++ + EG
Sbjct: 3 PGKKPVSAFSKKPRSVEVAAGSPAVFEAETER-AGVKVRWQRGGSDISASNKYGLATEGT 61
Query: 535 TYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELII 570
+TL + V D Y A G K +L +
Sbjct: 62 RHTLTVREVGPADQGSYAVIA----GSSKVKFDLKV 93
Score = 84.3 bits (209), Expect = 2e-19
Identities = 19/96 (19%), Positives = 32/96 (33%), Gaps = 5/96 (5%)
Query: 2082 PMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGD 2141
P R+ A F+ + W +G +I+ S ++ + EG
Sbjct: 3 PGKKPVSAFSKKPRSVEVAAGSPAVFEAETER-AGVKVRWQRGGSDISASNKYGLATEGT 61
Query: 2142 TYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELII 2177
+TL + V D Y A G K +L +
Sbjct: 62 RHTLTVREVGPADQGSYAVIA----GSSKVKFDLKV 93
Score = 79.3 bits (196), Expect = 1e-17
Identities = 22/84 (26%), Positives = 30/84 (35%), Gaps = 1/84 (1%)
Query: 90 KPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLH 149
F + + V G + E K RW R G +IS+ +Y + T G L
Sbjct: 8 VSAFSKKPRSVEVAAGSPAVFEAETER-AGVKVRWQRGGSDISASNKYGLATEGTRHTLT 66
Query: 150 FNEVTDVDNGDYTCEAYNSVGFAH 173
EV D G Y A +S
Sbjct: 67 VREVGPADQGSYAVIAGSSKVKFD 90
Score = 79.3 bits (196), Expect = 1e-17
Identities = 22/84 (26%), Positives = 30/84 (35%), Gaps = 1/84 (1%)
Query: 1697 KPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLH 1756
F + + V G + E K RW R G +IS+ +Y + T G L
Sbjct: 8 VSAFSKKPRSVEVAAGSPAVFEAETER-AGVKVRWQRGGSDISASNKYGLATEGTRHTLT 66
Query: 1757 FNEVTDVDNGDYTCEAYNSVGFAH 1780
EV D G Y A +S
Sbjct: 67 VREVGPADQGSYAVIAGSSKVKFD 90
Score = 52.3 bits (126), Expect = 3e-08
Identities = 17/81 (20%), Positives = 28/81 (34%), Gaps = 4/81 (4%)
Query: 574 PKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSERHAI 633
F+ PR + G V + K+ W R I + + + T
Sbjct: 9 SAFSKKPR---SVEVAAGSPAVFEAETER-AGVKVRWQRGGSDISASNKYGLATEGTRHT 64
Query: 634 LTIRDASNVDTAPYRVVAEND 654
LT+R+ D Y V+A +
Sbjct: 65 LTVREVGPADQGSYAVIAGSS 85
Score = 46.2 bits (110), Expect = 4e-06
Identities = 17/98 (17%), Positives = 26/98 (26%), Gaps = 6/98 (6%)
Query: 1131 PPCAPKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSEN 1190
P P R + V AG W G ++S + T
Sbjct: 3 PGKKPVSAFSKKPRSVEVAAGSPAVFEAETER-AGVKVRWQRGGSDISASNKYGLATEGT 61
Query: 1191 QTIYRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYVV 1228
+ + D GSY + GS + V+
Sbjct: 62 RHTLTVREV-GPADQGSYAVI----AGSSKVKFDLKVI 94
Score = 44.6 bits (106), Expect = 1e-05
Identities = 12/92 (13%), Positives = 31/92 (33%), Gaps = 5/92 (5%)
Query: 183 PPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIF 242
+ P ++ + G + +V + G + + +++ +
Sbjct: 8 VSAFSKKPRSVEVAAGSPAVFEAETERAGV-KVRWQRGGSDISASNKYGLATEGTRHTLT 66
Query: 243 IKEIRKEDAGDYTVNLSNSSGSVSGTFTINIT 274
++E+ D G Y V +GS F + +
Sbjct: 67 VREVGPADQGSYAV----IAGSSKVKFDLKVI 94
Score = 44.6 bits (106), Expect = 1e-05
Identities = 12/92 (13%), Positives = 31/92 (33%), Gaps = 5/92 (5%)
Query: 1790 PPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIF 1849
+ P ++ + G + +V + G + + +++ +
Sbjct: 8 VSAFSKKPRSVEVAAGSPAVFEAETERAGV-KVRWQRGGSDISASNKYGLATEGTRHTLT 66
Query: 1850 IKEIRKEDAGDYTVNLSNSSGSVSGTFTINIT 1881
++E+ D G Y V +GS F + +
Sbjct: 67 VREVGPADQGSYAV----IAGSSKVKFDLKVI 94
Score = 39.6 bits (93), Expect = 8e-04
Identities = 18/92 (19%), Positives = 27/92 (29%), Gaps = 17/92 (18%)
Query: 1405 EPGKQSGPVIVEEQPNKPVMDLSGVRDITVKAGED--FSIHVPFMAFPQPAAFWFANDSI 1462
EPGK+ ++ R + V AG F W S
Sbjct: 2 EPGKKPVSAFSKKP-----------RSVEVAAGSPAVFEAET---ERAGVKVRWQRGGSD 47
Query: 1463 IDDSDTRVHKQLTMNSASLVVKNSQRSDGGQY 1494
I S+ + +L V+ +D G Y
Sbjct: 48 ISASN-KYGLATEGTRHTLTVREVGPADQGSY 78
>2yuv_A Myosin-binding protein C, SLOW-type; SLOW-type myosin-binding
protein C, immunoglobulin domain, structural genomics,
NPPSFA; NMR {Homo sapiens} PDB: 2yxm_A
Length = 100
Score = 84.4 bits (209), Expect = 2e-19
Identities = 23/99 (23%), Positives = 35/99 (35%), Gaps = 6/99 (6%)
Query: 87 GGEKPDFIVPLKDLV-VPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGV 145
G F L V G + E P + +W +NG+EI +Y E G
Sbjct: 4 GSSGAAFAKILDPAYQVDKGGRVRFVVEL-ADPKLEVKWYKNGQEIRPSTKYIFEHKGCQ 62
Query: 146 FRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPP 184
L N D+ +Y A G S+ + + + P
Sbjct: 63 RILFINNCQMTDDSEYYVTA----GDEKCSTELFVRSGP 97
Score = 84.4 bits (209), Expect = 2e-19
Identities = 23/99 (23%), Positives = 35/99 (35%), Gaps = 6/99 (6%)
Query: 1694 GGEKPDFIVPLKDLV-VPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGV 1752
G F L V G + E P + +W +NG+EI +Y E G
Sbjct: 4 GSSGAAFAKILDPAYQVDKGGRVRFVVEL-ADPKLEVKWYKNGQEIRPSTKYIFEHKGCQ 62
Query: 1753 FRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPP 1791
L N D+ +Y A G S+ + + + P
Sbjct: 63 RILFINNCQMTDDSEYYVTA----GDEKCSTELFVRSGP 97
Score = 81.7 bits (202), Expect = 2e-18
Identities = 23/98 (23%), Positives = 36/98 (36%), Gaps = 6/98 (6%)
Query: 478 AKAPEIIVPLRNANAIQ-NHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTY 536
+ L A + +F + PK + W K +EI PS ++ +G
Sbjct: 5 SSGAAFAKILDPAYQVDKGGRVRFVVELAD-PKLEVKWYKNGQEIRPSTKYIFEHKGCQR 63
Query: 537 TLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAP 574
L IN+ D EY A G + EL + + P
Sbjct: 64 ILFINNCQMTDDSEYYVTA----GDEKCSTELFVRSGP 97
Score = 81.7 bits (202), Expect = 2e-18
Identities = 23/98 (23%), Positives = 36/98 (36%), Gaps = 6/98 (6%)
Query: 2085 AKAPEIIVPLRNANAIQ-NHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTY 2143
+ L A + +F + PK + W K +EI PS ++ +G
Sbjct: 5 SSGAAFAKILDPAYQVDKGGRVRFVVELAD-PKLEVKWYKNGQEIRPSTKYIFEHKGCQR 63
Query: 2144 TLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAP 2181
L IN+ D EY A G + EL + + P
Sbjct: 64 ILFINNCQMTDDSEYYVTA----GDEKCSTELFVRSGP 97
Score = 55.5 bits (134), Expect = 3e-09
Identities = 19/82 (23%), Positives = 31/82 (37%), Gaps = 9/82 (10%)
Query: 579 PPRF----RDTAYFDKGENVV--VKIPFTGYPKPKITWYRDNEVIESGGHFHVETSERHA 632
F DKG V V++ PK ++ WY++ + I + E
Sbjct: 7 GAAFAKILDPAYQVDKGGRVRFVVEL---ADPKLEVKWYKNGQEIRPSTKYIFEHKGCQR 63
Query: 633 ILTIRDASNVDTAPYRVVAEND 654
IL I + D + Y V A ++
Sbjct: 64 ILFINNCQMTDDSEYYVTAGDE 85
Score = 50.1 bits (120), Expect = 2e-07
Identities = 24/99 (24%), Positives = 34/99 (34%), Gaps = 7/99 (7%)
Query: 1134 APKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQTI 1193
L V G V + PK W NG E+ P + FE Q I
Sbjct: 7 GAAFAKILD-PAYQVDKGGRVRFVVELA-DPKLEVKWYKNGQEIRPSTKYIFEHKGCQRI 64
Query: 1194 YRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYVVDKPS 1232
+ + TD Y + T G + S +++V PS
Sbjct: 65 LFINNC-QMTDDSEYYV----TAGDEKCSTELFVRSGPS 98
Score = 50.1 bits (120), Expect = 2e-07
Identities = 17/95 (17%), Positives = 36/95 (37%), Gaps = 5/95 (5%)
Query: 183 PPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIF 242
+ A + +G + + A + EV KNG+ ++ ++ F I+F
Sbjct: 8 AAFAKILDPAYQVDKGGRVRFVVELADPKL-EVKWYKNGQEIRPSTKYIFEHKGCQRILF 66
Query: 243 IKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLP 277
I + D +Y V ++G + + + P
Sbjct: 67 INNCQMTDDSEYYV----TAGDEKCSTELFVRSGP 97
Score = 50.1 bits (120), Expect = 2e-07
Identities = 17/95 (17%), Positives = 36/95 (37%), Gaps = 5/95 (5%)
Query: 1790 PPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIF 1849
+ A + +G + + A + EV KNG+ ++ ++ F I+F
Sbjct: 8 AAFAKILDPAYQVDKGGRVRFVVELADPKL-EVKWYKNGQEIRPSTKYIFEHKGCQRILF 66
Query: 1850 IKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLP 1884
I + D +Y V ++G + + + P
Sbjct: 67 INNCQMTDDSEYYV----TAGDEKCSTELFVRSGP 97
Score = 31.6 bits (72), Expect = 0.74
Identities = 16/87 (18%), Positives = 26/87 (29%), Gaps = 16/87 (18%)
Query: 1410 SGPVIVEEQPNKPVMDLSGVRDITVKAGED--FSIHVPFMAFPQPAAFWFANDSIIDDSD 1467
SG + V G F + + A P+ W+ N I S
Sbjct: 6 SGAAFAKILDP----------AYQVDKGGRVRFVVEL---ADPKLEVKWYKNGQEIRPST 52
Query: 1468 TRVHKQLTMNSASLVVKNSQRSDGGQY 1494
+ + L + N Q +D +Y
Sbjct: 53 -KYIFEHKGCQRILFINNCQMTDDSEY 78
>1wwb_X Protein (brain derived neurotrophic factor receptor TRKB); TRK
receptor, receptor tyrosine kinase, 3D-domain swapping,
transferase; 2.10A {Homo sapiens} SCOP: b.1.1.4 PDB:
1hcf_X
Length = 103
Score = 83.6 bits (207), Expect = 3e-19
Identities = 17/104 (16%), Positives = 33/104 (31%), Gaps = 7/104 (6%)
Query: 479 KAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTY-- 536
I L + +H+ T+ G PKP + W + S +
Sbjct: 2 HFAPTITFLESP--TSDHHWCIPFTVKGNPKPALQWFYNGAILNESKYICTKIHVTNHTE 59
Query: 537 ---TLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFN 577
L +++ ++ +Y A N+ G + M P +
Sbjct: 60 YHGCLQLDNPTHMNNGDYTLIAKNEYGKDEKQISAHFMGWPGID 103
Score = 83.6 bits (207), Expect = 3e-19
Identities = 17/104 (16%), Positives = 33/104 (31%), Gaps = 7/104 (6%)
Query: 2086 KAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTY-- 2143
I L + +H+ T+ G PKP + W + S +
Sbjct: 2 HFAPTITFLESP--TSDHHWCIPFTVKGNPKPALQWFYNGAILNESKYICTKIHVTNHTE 59
Query: 2144 ---TLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFN 2184
L +++ ++ +Y A N+ G + M P +
Sbjct: 60 YHGCLQLDNPTHMNNGDYTLIAKNEYGKDEKQISAHFMGWPGID 103
Score = 82.9 bits (205), Expect = 6e-19
Identities = 15/100 (15%), Positives = 37/100 (37%), Gaps = 5/100 (5%)
Query: 577 NVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVET-----SERH 631
+ P + + G PKP + W+ + ++ + + +E H
Sbjct: 2 HFAPTITFLESPTSDHHWCIPFTVKGNPKPALQWFYNGAILNESKYICTKIHVTNHTEYH 61
Query: 632 AILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQISDRPD 671
L + + ++++ Y ++A+N+ G D + P
Sbjct: 62 GCLQLDNPTHMNNGDYTLIAKNEYGKDEKQISAHFMGWPG 101
Score = 82.9 bits (205), Expect = 7e-19
Identities = 21/102 (20%), Positives = 30/102 (29%), Gaps = 7/102 (6%)
Query: 91 PDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFR--- 147
I L+ + G P P +W NG ++ +
Sbjct: 4 APTITFLES--PTSDHHWCIPFTVKGNPKPALQWFYNGAILNESKYICTKIHVTNHTEYH 61
Query: 148 --LHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRID 187
L + T ++NGDYT A N G P ID
Sbjct: 62 GCLQLDNPTHMNNGDYTLIAKNEYGKDEKQISAHFMGWPGID 103
Score = 82.9 bits (205), Expect = 7e-19
Identities = 21/102 (20%), Positives = 30/102 (29%), Gaps = 7/102 (6%)
Query: 1698 PDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFR--- 1754
I L+ + G P P +W NG ++ +
Sbjct: 4 APTITFLES--PTSDHHWCIPFTVKGNPKPALQWFYNGAILNESKYICTKIHVTNHTEYH 61
Query: 1755 --LHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRID 1794
L + T ++NGDYT A N G P ID
Sbjct: 62 GCLQLDNPTHMNNGDYTLIAKNEYGKDEKQISAHFMGWPGID 103
Score = 64.8 bits (158), Expect = 1e-12
Identities = 21/103 (20%), Positives = 33/103 (32%), Gaps = 11/103 (10%)
Query: 1134 APKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQTI 1193
AP IT S + + I G PKP W NG ++ I +
Sbjct: 4 APTITFLES-----PTSDHHWCIPFTVKGNPKPALQWFYNGAILNESKYICTKIHVTNHT 58
Query: 1194 YRN-----KSAKRATDSGSYTIQLVNTVGSDSASCKVYVVDKP 1231
+ + ++G YT+ N G D + + P
Sbjct: 59 EYHGCLQLDNPTHM-NNGDYTLIAKNEYGKDEKQISAHFMGWP 100
Score = 53.6 bits (129), Expect = 1e-08
Identities = 15/102 (14%), Positives = 32/102 (31%), Gaps = 10/102 (9%)
Query: 183 PPRIDRMPNALYIPEGDNTKVKIFYAGD-QPMEVSLTKNGRVVQSDDRFKFTVLDD---- 237
P I + + + + G+ +P + NG ++ +
Sbjct: 4 APTITFLESP---TSDHHWCIPFTVKGNPKP-ALQWFYNGAILNESKYICTKIHVTNHTE 59
Query: 238 -YIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPG 278
+ + + + GDYT+ N G + + G PG
Sbjct: 60 YHGCLQLDNPTHMNNGDYTLIAKNEYGKDEKQISAHFMGWPG 101
Score = 53.6 bits (129), Expect = 1e-08
Identities = 15/102 (14%), Positives = 32/102 (31%), Gaps = 10/102 (9%)
Query: 1790 PPRIDRMPNALYIPEGDNTKVKIFYAGD-QPMEVSLTKNGRVVQSDDRFKFTVLDD---- 1844
P I + + + + G+ +P + NG ++ +
Sbjct: 4 APTITFLESP---TSDHHWCIPFTVKGNPKP-ALQWFYNGAILNESKYICTKIHVTNHTE 59
Query: 1845 -YIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPG 1885
+ + + + GDYT+ N G + + G PG
Sbjct: 60 YHGCLQLDNPTHMNNGDYTLIAKNEYGKDEKQISAHFMGWPG 101
Score = 48.6 bits (116), Expect = 7e-07
Identities = 19/81 (23%), Positives = 29/81 (35%), Gaps = 4/81 (4%)
Query: 1434 VKAGEDFSIHVPFMAFPQPAAFWFANDSIIDDSD----TRVHKQLTMNSASLVVKNSQRS 1489
+ + I P+PA WF N +I+++S T L + N
Sbjct: 13 PTSDHHWCIPFTVKGNPKPALQWFYNGAILNESKYICTKIHVTNHTEYHGCLQLDNPTHM 72
Query: 1490 DGGQYRLQLKNPAGFDTATLH 1510
+ G Y L KN G D +
Sbjct: 73 NNGDYTLIAKNEYGKDEKQIS 93
>1v5j_A KIAA1355 protein, RSGI RUH-008; FN3 domain, human cDNA, structural
genomics, riken structural genomics/proteomics
initiative, cell adhesion; NMR {Homo sapiens} SCOP:
b.1.2.1
Length = 108
Score = 83.8 bits (207), Expect = 4e-19
Identities = 28/110 (25%), Positives = 37/110 (33%), Gaps = 11/110 (10%)
Query: 1230 KPSPPQGP--LDVSDITPESCSLSWKPPLDDGGSPITNYVVEKYESATGFWSKLSSFV-- 1285
S P V+ TP L W PP + + YV+E + W L V
Sbjct: 3 SGSSGLSPPRGLVAVRTPRGVLLHWDPP-ELVPKRLDGYVLE-GRQGSQGWEVLDPAVAG 60
Query: 1286 RSPAYDVFGLETNRQYRFRVRAENQYGVSEPLELDNSITAKFPFTVPDPP 1335
V GL + Y FR+ A VS+P N T+ P
Sbjct: 61 TETELLVPGLIKDVLYEFRLVAFAGSFVSDPSNTANVSTSG-----LSGP 105
Score = 80.7 bits (199), Expect = 4e-18
Identities = 29/99 (29%), Positives = 47/99 (47%), Gaps = 4/99 (4%)
Query: 371 AKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVA 430
S SPP +V V L WD P + R+ GY ++ GS W+ ++ A
Sbjct: 1 GSSGSSGLSPP-RGLVAVRTPRGVLLHWDPP-ELVPKRLDGYVLEG-RQGSQGWEVLDPA 57
Query: 431 ICAPS-QINIPNLIEGRQYEFRVYAQNEAGLSLPSSASN 468
+ ++ +P LI+ YEFR+ A + +S PS+ +N
Sbjct: 58 VAGTETELLVPGLIKDVLYEFRLVAFAGSFVSDPSNTAN 96
Score = 80.7 bits (199), Expect = 4e-18
Identities = 29/99 (29%), Positives = 47/99 (47%), Gaps = 4/99 (4%)
Query: 1978 AKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVA 2037
S SPP +V V L WD P + R+ GY ++ GS W+ ++ A
Sbjct: 1 GSSGSSGLSPP-RGLVAVRTPRGVLLHWDPP-ELVPKRLDGYVLEG-RQGSQGWEVLDPA 57
Query: 2038 ICAPS-QINIPNLIEGRQYEFRVYAQNEAGLSLPSSASN 2075
+ ++ +P LI+ YEFR+ A + +S PS+ +N
Sbjct: 58 VAGTETELLVPGLIKDVLYEFRLVAFAGSFVSDPSNTAN 96
Score = 75.4 bits (185), Expect = 4e-16
Identities = 24/98 (24%), Positives = 39/98 (39%), Gaps = 5/98 (5%)
Query: 900 DRPHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTKVSSYV--TT 957
PP L A + L+W PP + + YV+E + + W + V T
Sbjct: 6 SGLSPPRGLVAVR-TPRGVLLHWDPP-ELVPKRLDGYVLEGRQGSQG-WEVLDPAVAGTE 62
Query: 958 PFVRVRNLAIGSTYEFRVMAENQYGLSKPALTIDPIKA 995
+ V L YEFR++A +S P+ T + +
Sbjct: 63 TELLVPGLIKDVLYEFRLVAFAGSFVSDPSNTANVSTS 100
Score = 74.2 bits (182), Expect = 9e-16
Identities = 24/108 (22%), Positives = 39/108 (36%), Gaps = 9/108 (8%)
Query: 277 PGPPIGP--LDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTT-CHD 333
+ P V+ T LHW+PP ++ YV+E R S + +
Sbjct: 4 GSSGLSPPRGLVAVRTPRGVLLHWDPP-ELVPKRLDGYVLEGRQGSQGWEVLDPAVAGTE 62
Query: 334 TTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPP 381
T +V GL + Y F ++A + + P N + S P
Sbjct: 63 TELLVPGLIKDVLYEFRLVAFAGSFVSDPSNTANVSTS-----GLSGP 105
Score = 74.2 bits (182), Expect = 9e-16
Identities = 24/108 (22%), Positives = 39/108 (36%), Gaps = 9/108 (8%)
Query: 1884 PGPPIGP--LDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTT-CHD 1940
+ P V+ T LHW+PP ++ YV+E R S + +
Sbjct: 4 GSSGLSPPRGLVAVRTPRGVLLHWDPP-ELVPKRLDGYVLEGRQGSQGWEVLDPAVAGTE 62
Query: 1941 TTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPP 1988
T +V GL + Y F ++A + + P N + S P
Sbjct: 63 TELLVPGLIKDVLYEFRLVAFAGSFVSDPSNTANVSTS-----GLSGP 105
Score = 74.2 bits (182), Expect = 9e-16
Identities = 25/99 (25%), Positives = 39/99 (39%), Gaps = 6/99 (6%)
Query: 667 SDRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSWIRVG---NTR 723
S PP+ V + L W P + Y++E R+ W +
Sbjct: 5 SSGLSPPR-GLVAVRTPRGVLLHWDPPE-LVPKRLDGYVLEGRQ-GSQGWEVLDPAVAGT 61
Query: 724 FTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITT 762
T + + GL YEFR+ A SDPS T+++ T+
Sbjct: 62 ETELLVPGLIKDVLYEFRLVAFAGSFVSDPSNTANVSTS 100
Score = 71.1 bits (174), Expect = 1e-14
Identities = 19/132 (14%), Positives = 36/132 (27%), Gaps = 34/132 (25%)
Query: 995 AKHPFDVPGAPGAPKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMA 1054
+P T + L W P + Y++E R W
Sbjct: 1 GSSGSS-GLSPPRGLVAVRTPRGVLLHWDPP-ELVPKRLDGYVLEGRQ-GSQGWEVLD-P 56
Query: 1055 HIPDTSLKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAA 1114
+ T + + V LI++ YEFR+ A +
Sbjct: 57 AVAGTETELL------------------------------VPGLIKDVLYEFRLVAFAGS 86
Query: 1115 GQGPWSSSSDII 1126
S+++++
Sbjct: 87 FVSDPSNTANVS 98
Score = 63.8 bits (155), Expect = 4e-12
Identities = 20/124 (16%), Positives = 30/124 (24%), Gaps = 48/124 (38%)
Query: 1559 VDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEG 1618
T + L W P + Y++E R
Sbjct: 16 AVRTPRGVLLHWDPP-ELVPKRLDGYVLEGR----------------------------- 45
Query: 1619 KSIGSERGSTAQFLEREVGGAIWLKCN-DYNVLECSFSVLNLVEGNDYEFRIIAVNAIGK 1677
G W + E V L++ YEFR++A
Sbjct: 46 -----------------QGSQGWEVLDPAVAGTETELLVPGLIKDVLYEFRLVAFAGSFV 88
Query: 1678 SEPS 1681
S+PS
Sbjct: 89 SDPS 92
Score = 57.6 bits (139), Expect = 5e-10
Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Query: 22 YIIERREVGGAIWLKCN-DYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPS 74
Y++E R+ W + E V L++ YEFR++A S+PS
Sbjct: 40 YVLEGRQGSQG-WEVLDPAVAGTETELLVPGLIKDVLYEFRLVAFAGSFVSDPS 92
Score = 34.1 bits (78), Expect = 0.084
Identities = 10/69 (14%), Positives = 20/69 (28%), Gaps = 10/69 (14%)
Query: 1328 PFTVPDPPGQPQIVDWDTNNATLMWDRPRTDGGSKIQGYKMLLKTPTGELPTTIWSKIR- 1386
+ PP + + L WD P ++ GY + + + W +
Sbjct: 4 GSSGLSPP-RGLVAVRTPRGVLLHWDPP-ELVPKRLDGYVLEGRQGSQG-----WEVLDP 56
Query: 1387 --PTSSTVY 1393
+ T
Sbjct: 57 AVAGTETEL 65
>1x5g_A Neogenin; RGM binding, fibronectin type III domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
b.1.2.1
Length = 116
Score = 83.5 bits (207), Expect = 5e-19
Identities = 25/118 (21%), Positives = 43/118 (36%), Gaps = 7/118 (5%)
Query: 358 GMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKH 417
G ++ + P P + ++W+ P+ G IQ Y +
Sbjct: 1 GSSGSSG---RVETQPEVQLPGPAPNLRAYAASPTSITVTWETPVSGNG-EIQNYKLYYM 56
Query: 418 EVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDP 475
E G+D Q V+V+ I L + +Y FRV A N+ G + + + D
Sbjct: 57 EKGTDKEQDVDVSS---HSYTINGLKKYTEYSFRVVAYNKHGPGVSTPDVAVRTLSDS 111
Score = 83.5 bits (207), Expect = 5e-19
Identities = 25/118 (21%), Positives = 43/118 (36%), Gaps = 7/118 (5%)
Query: 1965 GMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKH 2024
G ++ + P P + ++W+ P+ G IQ Y +
Sbjct: 1 GSSGSSG---RVETQPEVQLPGPAPNLRAYAASPTSITVTWETPVSGNG-EIQNYKLYYM 56
Query: 2025 EVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDP 2082
E G+D Q V+V+ I L + +Y FRV A N+ G + + + D
Sbjct: 57 EKGTDKEQDVDVSS---HSYTINGLKKYTEYSFRVVAYNKHGPGVSTPDVAVRTLSDS 111
Score = 83.5 bits (207), Expect = 6e-19
Identities = 30/103 (29%), Positives = 46/103 (44%), Gaps = 7/103 (6%)
Query: 1217 GSDSASCKVYV---VDKPSPPQGPLDVSDITPESCSLSWKPPLDDGGSPITNYVVEKYES 1273
GS +S +V V P P L +P S +++W+ P+ G I NY + E
Sbjct: 1 GSSGSSGRVETQPEVQLPGPAPN-LRAYAASPTSITVTWETPVSGNG-EIQNYKLYYMEK 58
Query: 1274 ATGFWSKLSSFVRSPAYDVFGLETNRQYRFRVRAENQYGVSEP 1316
T + V S +Y + GL+ +Y FRV A N++G
Sbjct: 59 GTDKEQDVD--VSSHSYTINGLKKYTEYSFRVVAYNKHGPGVS 99
Score = 78.1 bits (193), Expect = 5e-17
Identities = 27/116 (23%), Positives = 44/116 (37%), Gaps = 6/116 (5%)
Query: 891 EMVLIFEVLDRPHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTK 950
V + P P NL A + S+T+ W P G EI NY + + +
Sbjct: 7 GRVETQPEVQLPGPAPNLRAYAASPTSITVTWETPVSGNG-EIQNYKLYYMEKGTDKEQD 65
Query: 951 VSSYVTTPFVRVRNLAIGSTYEFRVMAENQYGLSKPALTIDPIKAKHPFDVPGAPG 1006
V V++ + L + Y FRV+A N++G + + D + G
Sbjct: 66 VD--VSSHSYTINGLKKYTEYSFRVVAYNKHGPGVST---PDVAVRTLSDSGPSSG 116
Score = 78.1 bits (193), Expect = 5e-17
Identities = 26/110 (23%), Positives = 37/110 (33%), Gaps = 3/110 (2%)
Query: 656 GMDSAIVKIQIS-DRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMS 714
S V+ Q P P S+ + W P+ G I NY + E
Sbjct: 3 SGSSGRVETQPEVQLPGPAPNLRAYAASPTSITVTWETPVSGNG-EIQNYKLYYMEKGTD 61
Query: 715 SWIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKD 764
V + + I GL +Y FRV A N +G + + T D
Sbjct: 62 KEQDV-DVSSHSYTINGLKKYTEYSFRVVAYNKHGPGVSTPDVAVRTLSD 110
Score = 77.0 bits (190), Expect = 1e-16
Identities = 22/108 (20%), Positives = 42/108 (38%), Gaps = 7/108 (6%)
Query: 275 GLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHDT 334
LPGP L + + T+ W P G ++ +Y + + + +
Sbjct: 16 QLPGPAPN-LRAYAASPTSITVTWETPVSGNG-EIQNYKLYYMEKGTDKEQDVDVSS--H 71
Query: 335 TFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPG 382
++ + GL + EY F V+A N++G G + ++ D G
Sbjct: 72 SYTINGLKKYTEYSFRVVAYNKHGPGVSTP---DVAVRTLSDSGPSSG 116
Score = 77.0 bits (190), Expect = 1e-16
Identities = 22/108 (20%), Positives = 42/108 (38%), Gaps = 7/108 (6%)
Query: 1882 GLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHDT 1941
LPGP L + + T+ W P G ++ +Y + + + +
Sbjct: 16 QLPGPAPN-LRAYAASPTSITVTWETPVSGNG-EIQNYKLYYMEKGTDKEQDVDVSS--H 71
Query: 1942 TFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPG 1989
++ + GL + EY F V+A N++G G + ++ D G
Sbjct: 72 SYTINGLKKYTEYSFRVVAYNKHGPGVSTP---DVAVRTLSDSGPSSG 116
Score = 77.0 bits (190), Expect = 1e-16
Identities = 24/135 (17%), Positives = 40/135 (29%), Gaps = 36/135 (26%)
Query: 991 DPIKAKHPFDVPGAPGAPKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIK 1050
++ + +PG + ++ SI++ W P G IQ Y + DK
Sbjct: 7 GRVETQPEVQLPGPAPNLRAYAASPTSITVTWETPVSGNG-EIQNYKLYYMEKGTDKEQD 65
Query: 1051 ASMAHIPDTSLKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCA 1110
+ +S Y + L + EY FRV A
Sbjct: 66 -----VDVSSHSYT------------------------------INGLKKYTEYSFRVVA 90
Query: 1111 VNAAGQGPWSSSSDI 1125
N G G + +
Sbjct: 91 YNKHGPGVSTPDVAV 105
Score = 47.7 bits (114), Expect = 2e-06
Identities = 20/125 (16%), Positives = 35/125 (28%), Gaps = 49/125 (39%)
Query: 1557 KGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVS 1616
+ ++ SI++ W P G IQ Y + DK
Sbjct: 25 RAYAASPTSITVTWETPVSGNG-EIQNYKLYYMEKGTDKE-------------------- 63
Query: 1617 EGKSIGSERGSTAQFLEREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIG 1676
D +V S+++ L + +Y FR++A N G
Sbjct: 64 ----------------------------QDVDVSSHSYTINGLKKYTEYSFRVVAYNKHG 95
Query: 1677 KSEPS 1681
+
Sbjct: 96 PGVST 100
Score = 43.1 bits (102), Expect = 9e-05
Identities = 13/53 (24%), Positives = 23/53 (43%), Gaps = 3/53 (5%)
Query: 22 YIIERREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPS 74
Y + E G D +V S+++ L + +Y FR++A N G +
Sbjct: 51 YKLYYMEKGTDKE---QDVDVSSHSYTINGLKKYTEYSFRVVAYNKHGPGVST 100
Score = 39.6 bits (93), Expect = 0.001
Identities = 13/71 (18%), Positives = 26/71 (36%), Gaps = 5/71 (7%)
Query: 1322 SITAKFPFTVPDPPGQPQIVDWDTNNATLMWDRPRTDGGSKIQGYKMLLKTPTGELPTTI 1381
+ + +P P + + T+ W+ P + G +IQ YK+ E T
Sbjct: 8 RVETQPEVQLPGPAPNLRAYAASPTSITVTWETPVSGNG-EIQNYKLYYM----EKGTDK 62
Query: 1382 WSKIRPTSSTV 1392
+ +S +
Sbjct: 63 EQDVDVSSHSY 73
>2cr3_A Basic fibroblast growth factor receptor 1; IG fold, FGFR1, BFGF-R,
structural genomics, NPPSFA; NMR {Homo sapiens}
Length = 99
Score = 82.4 bits (204), Expect = 8e-19
Identities = 21/97 (21%), Positives = 35/97 (36%), Gaps = 5/97 (5%)
Query: 88 GEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFR 147
G V ++ +V G LL L+C WLR+G +++ R R+
Sbjct: 1 GSSGSSGVEVESFLVHPGDLLQLRCRLRDDV-QSINWLRDGVQLAESNRTRITGE----E 55
Query: 148 LHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPP 184
+ + D+G Y C + G T V +
Sbjct: 56 VEVQDSVPADSGLYACVTSSPSGSDTTYFSVNVSDAL 92
Score = 82.4 bits (204), Expect = 8e-19
Identities = 21/97 (21%), Positives = 35/97 (36%), Gaps = 5/97 (5%)
Query: 1695 GEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFR 1754
G V ++ +V G LL L+C WLR+G +++ R R+
Sbjct: 1 GSSGSSGVEVESFLVHPGDLLQLRCRLRDDV-QSINWLRDGVQLAESNRTRITGE----E 55
Query: 1755 LHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPP 1791
+ + D+G Y C + G T V +
Sbjct: 56 VEVQDSVPADSGLYACVTSSPSGSDTTYFSVNVSDAL 92
Score = 72.0 bits (177), Expect = 4e-15
Identities = 16/95 (16%), Positives = 33/95 (34%), Gaps = 5/95 (5%)
Query: 480 APEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLI 539
+ V + + Q +C + +I+WL+ ++ S R I E +
Sbjct: 3 SGSSGVEVESFLVHPGDLLQLRCRLRDDV-QSINWLRDGVQLAESNRTRITGE----EVE 57
Query: 540 INSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAP 574
+ D+ Y C + G +T + + A
Sbjct: 58 VQDSVPADSGLYACVTSSPSGSDTTYFSVNVSDAL 92
Score = 72.0 bits (177), Expect = 4e-15
Identities = 16/95 (16%), Positives = 33/95 (34%), Gaps = 5/95 (5%)
Query: 2087 APEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLI 2146
+ V + + Q +C + +I+WL+ ++ S R I E +
Sbjct: 3 SGSSGVEVESFLVHPGDLLQLRCRLRDDV-QSINWLRDGVQLAESNRTRITGE----EVE 57
Query: 2147 INSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAP 2181
+ D+ Y C + G +T + + A
Sbjct: 58 VQDSVPADSGLYACVTSSPSGSDTTYFSVNVSDAL 92
Score = 64.0 bits (156), Expect = 2e-12
Identities = 15/102 (14%), Positives = 33/102 (32%), Gaps = 8/102 (7%)
Query: 572 TAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSERH 631
++ V + G+ + ++ I W RD + + E
Sbjct: 2 SSGSSGVEVE---SFLVHPGDLLQLRCRLRDDV-QSINWLRDGVQLAESNRTRITGEE-- 55
Query: 632 AILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQISDRPDPP 673
+ ++D+ D+ Y V + G D+ + +SD
Sbjct: 56 --VEVQDSVPADSGLYACVTSSPSGSDTTYFSVNVSDALPSG 95
Score = 60.1 bits (146), Expect = 6e-11
Identities = 19/105 (18%), Positives = 44/105 (41%), Gaps = 11/105 (10%)
Query: 181 GTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFT--VLDDY 238
G+ + + GD +++ D ++ ++G + +R + T ++
Sbjct: 1 GSSGSSGVEVESFLVHPGDLLQLR-CRLRDDVQSINWLRDGVQLAESNRTRITGEEVE-- 57
Query: 239 IIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPIGP 283
+++ D+G Y S+ SGS + F++N++ P GP
Sbjct: 58 ----VQDSVPADSGLYACVTSSPSGSDTTYFSVNVS--DALPSGP 96
Score = 60.1 bits (146), Expect = 6e-11
Identities = 19/105 (18%), Positives = 44/105 (41%), Gaps = 11/105 (10%)
Query: 1788 GTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFT--VLDDY 1845
G+ + + GD +++ D ++ ++G + +R + T ++
Sbjct: 1 GSSGSSGVEVESFLVHPGDLLQLR-CRLRDDVQSINWLRDGVQLAESNRTRITGEEVE-- 57
Query: 1846 IIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPIGP 1890
+++ D+G Y S+ SGS + F++N++ P GP
Sbjct: 58 ----VQDSVPADSGLYACVTSSPSGSDTTYFSVNVS--DALPSGP 96
Score = 60.1 bits (146), Expect = 6e-11
Identities = 18/101 (17%), Positives = 34/101 (33%), Gaps = 8/101 (7%)
Query: 1134 APKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQTI 1193
+ ++ V G+ + + W +G +++ R + T E +
Sbjct: 3 SGSSGVEV--ESFLVHPGDLLQLRCRLRDDV-QSINWLRDGVQLAESNRTRI-TGEEVEV 58
Query: 1194 YRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYVVDKPSPP 1234
+ + A DSG Y + GSD+ V V D
Sbjct: 59 ---QDSVPA-DSGLYACVTSSPSGSDTTYFSVNVSDALPSG 95
Score = 35.1 bits (81), Expect = 0.034
Identities = 14/81 (17%), Positives = 28/81 (34%), Gaps = 6/81 (7%)
Query: 1430 RDITVKAGEDFSIHVPFMAFPQPAAFWFANDSIIDDSDTRVHKQLTMNSASLVVKNSQRS 1489
V G+ + + W + + +S+ R + + V++S +
Sbjct: 11 ESFLVHPGDLLQLRCRLRDDV-QSINWLRDGVQLAESN-RTR----ITGEEVEVQDSVPA 64
Query: 1490 DGGQYRLQLKNPAGFDTATLH 1510
D G Y +P+G DT
Sbjct: 65 DSGLYACVTSSPSGSDTTYFS 85
>2edk_A Myosin-binding protein C, fast-type; IG fold, fast MYBP-C,
C-protein, skeletal muscle fast- isoform, MYBPCF,
structural genomics, NPPSFA; NMR {Homo sapiens}
Length = 101
Score = 82.8 bits (205), Expect = 8e-19
Identities = 19/99 (19%), Positives = 35/99 (35%), Gaps = 9/99 (9%)
Query: 476 MAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPS----ARHHIFA 531
++ I+ PL + + ++ + W+K E+T AR+
Sbjct: 4 GSSGPVLIVTPLEDQQVFVGDRVEMAVEVSE-EGAQVMWMKNGVELTREDSFKARYRFKK 62
Query: 532 EGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELII 570
+G + LI + V D Y +AELI+
Sbjct: 63 DGKRHILIFSDVVQEDRGRYQVITNG----GQCEAELIV 97
Score = 82.8 bits (205), Expect = 8e-19
Identities = 19/99 (19%), Positives = 35/99 (35%), Gaps = 9/99 (9%)
Query: 2083 MAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPS----ARHHIFA 2138
++ I+ PL + + ++ + W+K E+T AR+
Sbjct: 4 GSSGPVLIVTPLEDQQVFVGDRVEMAVEVSE-EGAQVMWMKNGVELTREDSFKARYRFKK 62
Query: 2139 EGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELII 2177
+G + LI + V D Y +AELI+
Sbjct: 63 DGKRHILIFSDVVQEDRGRYQVITNG----GQCEAELIV 97
Score = 76.2 bits (188), Expect = 1e-16
Identities = 22/86 (25%), Positives = 36/86 (41%), Gaps = 5/86 (5%)
Query: 91 PDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSG----ARYRVETAGGVF 146
+ PL+D V +G + + E + + W++NG E++ ARYR + G
Sbjct: 9 VLIVTPLEDQQVFVGDRVEMAVEVSE-EGAQVMWMKNGVELTREDSFKARYRFKKDGKRH 67
Query: 147 RLHFNEVTDVDNGDYTCEAYNSVGFA 172
L F++V D G Y A
Sbjct: 68 ILIFSDVVQEDRGRYQVITNGGQCEA 93
Score = 76.2 bits (188), Expect = 1e-16
Identities = 22/86 (25%), Positives = 36/86 (41%), Gaps = 5/86 (5%)
Query: 1698 PDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSG----ARYRVETAGGVF 1753
+ PL+D V +G + + E + + W++NG E++ ARYR + G
Sbjct: 9 VLIVTPLEDQQVFVGDRVEMAVEVSE-EGAQVMWMKNGVELTREDSFKARYRFKKDGKRH 67
Query: 1754 RLHFNEVTDVDNGDYTCEAYNSVGFA 1779
L F++V D G Y A
Sbjct: 68 ILIFSDVVQEDRGRYQVITNGGQCEA 93
Score = 47.3 bits (113), Expect = 2e-06
Identities = 16/103 (15%), Positives = 33/103 (32%), Gaps = 18/103 (17%)
Query: 1135 PKITSDLSIRDMTVLAGE--EFTITVPFSGRPKPTPIWTVNGDEVSPDGRI--KFETSEN 1190
I + L D V G+ E + V +W NG E++ + ++ ++
Sbjct: 9 VLIVTPL--EDQQVFVGDRVEMAVEV---SEEGAQVMWMKNGVELTREDSFKARYRFKKD 63
Query: 1191 QTIYR---NKSAKRATDSGSYTIQLVNTVGSDSASCKVYVVDK 1230
+ + D G Y + ++ V +K
Sbjct: 64 GKRHILIFSDV--VQEDRGRYQVI----TNGGQCEAELIVEEK 100
Score = 46.6 bits (111), Expect = 4e-06
Identities = 10/88 (11%), Positives = 22/88 (25%), Gaps = 14/88 (15%)
Query: 574 PKFNVPPRFRDTAYFDKGENVVVKIPFT---GYPKPKITWYRDNEVIESG----GHFHVE 626
P + G+ V ++ W ++ + + +
Sbjct: 9 VLIVTPLEDQQVF---VGDRVE----MAVEVSEEGAQVMWMKNGVELTREDSFKARYRFK 61
Query: 627 TSERHAILTIRDASNVDTAPYRVVAEND 654
+ IL D D Y+V+
Sbjct: 62 KDGKRHILIFSDVVQEDRGRYQVITNGG 89
Score = 40.8 bits (96), Expect = 4e-04
Identities = 17/86 (19%), Positives = 33/86 (38%), Gaps = 5/86 (5%)
Query: 183 PPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDD----RFKFTVLDDY 238
P I + GD ++ + + + +V KNG + +D R++F
Sbjct: 8 PVLIVTPLEDQQVFVGDRVEMAVEVSEEGA-QVMWMKNGVELTREDSFKARYRFKKDGKR 66
Query: 239 IIIFIKEIRKEDAGDYTVNLSNSSGS 264
I+ ++ +ED G Y V +
Sbjct: 67 HILIFSDVVQEDRGRYQVITNGGQCE 92
Score = 40.8 bits (96), Expect = 4e-04
Identities = 17/86 (19%), Positives = 33/86 (38%), Gaps = 5/86 (5%)
Query: 1790 PPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDD----RFKFTVLDDY 1845
P I + GD ++ + + + +V KNG + +D R++F
Sbjct: 8 PVLIVTPLEDQQVFVGDRVEMAVEVSEEGA-QVMWMKNGVELTREDSFKARYRFKKDGKR 66
Query: 1846 IIIFIKEIRKEDAGDYTVNLSNSSGS 1871
I+ ++ +ED G Y V +
Sbjct: 67 HILIFSDVVQEDRGRYQVITNGGQCE 92
Score = 34.2 bits (79), Expect = 0.073
Identities = 16/95 (16%), Positives = 32/95 (33%), Gaps = 10/95 (10%)
Query: 1421 KPVMDLSGVRDITVKAGED--FSIHVPFMAFPQPAAFWFANDSIIDDSD---TRVHKQLT 1475
PV+ ++ + D V G+ ++ V + W N + D R +
Sbjct: 7 GPVLIVTPLEDQQVFVGDRVEMAVEV---SEEGAQVMWMKNGVELTREDSFKARYRFKKD 63
Query: 1476 MNSASLVVKNSQRSDGGQYRLQLKNPAGFDTATLH 1510
L+ + + D G+Y++ A L
Sbjct: 64 GKRHILIFSDVVQEDRGRYQVITNGGQC--EAELI 96
>1x44_A Myosin-binding protein C, SLOW-type; IG-like domain, SLOW-
type/skeletal muscle SLOW-isoform, structural genomics,
NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Length = 103
Score = 82.4 bits (204), Expect = 1e-18
Identities = 21/96 (21%), Positives = 35/96 (36%), Gaps = 7/96 (7%)
Query: 477 AAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREIT--PSARHHIFAEGD 534
+ + L + A + +C ++ + W K EI P +R+ I EG
Sbjct: 4 GSSGIMVTKQLEDTTAYCGERVELECEVSE-DDANVKWFKNGEEIIPGPKSRYRIRVEGK 62
Query: 535 TYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELII 570
+ LII DA EY + A+L +
Sbjct: 63 KHILIIEGATKADAAEYSVMTTG----GQSSAKLSV 94
Score = 82.4 bits (204), Expect = 1e-18
Identities = 21/96 (21%), Positives = 35/96 (36%), Gaps = 7/96 (7%)
Query: 2084 AAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREIT--PSARHHIFAEGD 2141
+ + L + A + +C ++ + W K EI P +R+ I EG
Sbjct: 4 GSSGIMVTKQLEDTTAYCGERVELECEVSE-DDANVKWFKNGEEIIPGPKSRYRIRVEGK 62
Query: 2142 TYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELII 2177
+ LII DA EY + A+L +
Sbjct: 63 KHILIIEGATKADAAEYSVMTTG----GQSSAKLSV 94
Score = 77.4 bits (191), Expect = 6e-17
Identities = 24/101 (23%), Positives = 36/101 (35%), Gaps = 5/101 (4%)
Query: 86 VGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGA--RYRVETAG 143
G L+D G+ + L+CE + +W +NG EI G RYR+ G
Sbjct: 3 SGSSGIMVTKQLEDTTAYCGERVELECEVSE-DDANVKWFKNGEEIIPGPKSRYRIRVEG 61
Query: 144 GVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPP 184
L T D +Y+ A V + + P
Sbjct: 62 KKHILIIEGATKADAAEYSVMTTGGQSSA--KLSVDLKSGP 100
Score = 77.4 bits (191), Expect = 6e-17
Identities = 24/101 (23%), Positives = 36/101 (35%), Gaps = 5/101 (4%)
Query: 1693 VGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGA--RYRVETAG 1750
G L+D G+ + L+CE + +W +NG EI G RYR+ G
Sbjct: 3 SGSSGIMVTKQLEDTTAYCGERVELECEVSE-DDANVKWFKNGEEIIPGPKSRYRIRVEG 61
Query: 1751 GVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPP 1791
L T D +Y+ A V + + P
Sbjct: 62 KKHILIIEGATKADAAEYSVMTTGGQSSA--KLSVDLKSGP 100
Score = 54.3 bits (131), Expect = 8e-09
Identities = 20/106 (18%), Positives = 34/106 (32%), Gaps = 12/106 (11%)
Query: 1134 APKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQTI 1193
+T L D T GE + S W NG+E+ P + ++
Sbjct: 7 GIMVTKQL--EDTTAYCGERVELECEVSE-DDANVKWFKNGEEIIPGPKSRYRIRVEGKK 63
Query: 1194 YR---NKSAKRATDSGSYTIQLVNTVGSDSASCKVYVVDKPSPPQG 1236
+ + D+ Y++ +S K+ V K P G
Sbjct: 64 HILIIEGA--TKADAAEYSVM----TTGGQSSAKLSVDLKSGPSSG 103
Score = 48.1 bits (115), Expect = 1e-06
Identities = 18/83 (21%), Positives = 31/83 (37%), Gaps = 5/83 (6%)
Query: 591 GENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSE--RHAILTIRDASNVDTAPYR 648
GE V ++ + + W+++ E I G + IL I A+ D A Y
Sbjct: 22 GERVELECEVSE-DDANVKWFKNGEEIIPGPKSRYRIRVEGKKHILIIEGATKADAAEYS 80
Query: 649 VVAENDLGMDSAIVKIQISDRPD 671
V+ SA + + + P
Sbjct: 81 VMTTGGQS--SAKLSVDLKSGPS 101
Score = 43.5 bits (103), Expect = 5e-05
Identities = 17/103 (16%), Positives = 39/103 (37%), Gaps = 7/103 (6%)
Query: 182 TPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDD--YI 239
+ + + G+ +++ + D V KNG + + ++ + +
Sbjct: 6 SGIMVTKQLEDTTAYCGERVELECEVSEDDA-NVKWFKNGEEIIPGPKSRYRIRVEGKKH 64
Query: 240 IIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPIG 282
I+ I+ K DA +Y+V + S +++ GP G
Sbjct: 65 ILIIEGATKADAAEYSVMTTGGQSSA----KLSVDLKSGPSSG 103
Score = 43.5 bits (103), Expect = 5e-05
Identities = 17/103 (16%), Positives = 39/103 (37%), Gaps = 7/103 (6%)
Query: 1789 TPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDD--YI 1846
+ + + G+ +++ + D V KNG + + ++ + +
Sbjct: 6 SGIMVTKQLEDTTAYCGERVELECEVSEDDA-NVKWFKNGEEIIPGPKSRYRIRVEGKKH 64
Query: 1847 IIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPIG 1889
I+ I+ K DA +Y+V + S +++ GP G
Sbjct: 65 ILIIEGATKADAAEYSVMTTGGQSSA----KLSVDLKSGPSSG 103
Score = 40.0 bits (94), Expect = 8e-04
Identities = 19/101 (18%), Positives = 35/101 (34%), Gaps = 8/101 (7%)
Query: 1422 PVMDLSGVRDITVKAGED--FSIHVPFMAFPQPAAFWFANDSIIDDSDT-RVHKQLTMNS 1478
+M + D T GE V + WF N I R ++
Sbjct: 7 GIMVTKQLEDTTAYCGERVELECEV---SEDDANVKWFKNGEEIIPGPKSRYRIRVEGKK 63
Query: 1479 ASLVVKNSQRSDGGQYRLQLKNPAGFDTATLHSRLRTLPDS 1519
L+++ + ++D +Y + +A L L++ P S
Sbjct: 64 HILIIEGATKADAAEYSVMTTGGQS--SAKLSVDLKSGPSS 102
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex,
ATP-binding, cytoplasm, nucleotide-binding, nucleus,
phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo
sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X*
3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A*
3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Length = 336
Score = 88.2 bits (219), Expect = 2e-18
Identities = 24/103 (23%), Positives = 45/103 (43%), Gaps = 11/103 (10%)
Query: 804 SKYVPQPVDIKTSSVYDHYDILEE-IGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKE 862
+ + Q + K +V D Y + ++ +G G G V C R+TG A K + +
Sbjct: 12 LEVLFQGPEPKKYAVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLY-----DSP 66
Query: 863 LIRKEIDIMNQL-HHPKLINLHDAFEDDDEMV----LIFEVLD 900
R+E+D Q P ++ + D +E+ +I E ++
Sbjct: 67 KARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIMECME 109
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens}
Length = 100
Score = 81.3 bits (201), Expect = 2e-18
Identities = 28/100 (28%), Positives = 39/100 (39%), Gaps = 4/100 (4%)
Query: 475 PMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITP-SARHHIFAEG 533
++ P I+ N + A +C TG P P ISWLK R I +G
Sbjct: 3 SGSSGPPIILQGPANQTLAVDGTALLKCKATGDPLPVISWLKEGFTFPGRDPRATIQEQG 62
Query: 534 DTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTA 573
TL I ++ D Y C A + G S A L + +
Sbjct: 63 ---TLQIKNLRISDTGTYTCVATSSSGETSWSAVLDVTES 99
Score = 81.3 bits (201), Expect = 2e-18
Identities = 28/100 (28%), Positives = 39/100 (39%), Gaps = 4/100 (4%)
Query: 2082 PMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITP-SARHHIFAEG 2140
++ P I+ N + A +C TG P P ISWLK R I +G
Sbjct: 3 SGSSGPPIILQGPANQTLAVDGTALLKCKATGDPLPVISWLKEGFTFPGRDPRATIQEQG 62
Query: 2141 DTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTA 2180
TL I ++ D Y C A + G S A L + +
Sbjct: 63 ---TLQIKNLRISDTGTYTCVATSSSGETSWSAVLDVTES 99
Score = 80.1 bits (198), Expect = 5e-18
Identities = 23/93 (24%), Positives = 38/93 (40%), Gaps = 4/93 (4%)
Query: 89 EKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREI-SSGARYRVETAGGVFR 147
P + + + + L+C+ATG P+P WL+ G R ++ G
Sbjct: 7 GPPIILQGPANQTLAVDGTALLKCKATGDPLPVISWLKEGFTFPGRDPRATIQEQGT--- 63
Query: 148 LHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKI 180
L + D G YTC A +S G S+ + +
Sbjct: 64 LQIKNLRISDTGTYTCVATSSSGETSWSAVLDV 96
Score = 80.1 bits (198), Expect = 5e-18
Identities = 23/93 (24%), Positives = 38/93 (40%), Gaps = 4/93 (4%)
Query: 1696 EKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREI-SSGARYRVETAGGVFR 1754
P + + + + L+C+ATG P+P WL+ G R ++ G
Sbjct: 7 GPPIILQGPANQTLAVDGTALLKCKATGDPLPVISWLKEGFTFPGRDPRATIQEQGT--- 63
Query: 1755 LHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKI 1787
L + D G YTC A +S G S+ + +
Sbjct: 64 LQIKNLRISDTGTYTCVATSSSGETSWSAVLDV 96
Score = 53.2 bits (128), Expect = 1e-08
Identities = 18/97 (18%), Positives = 32/97 (32%), Gaps = 7/97 (7%)
Query: 573 APKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIES-GGHFHVETSERH 631
P P ++K TG P P I+W ++ ++
Sbjct: 8 PPIILQGPA---NQTLAVDGTALLKCKATGDPLPVISWLKEGFTFPGRDPRATIQEQ--- 61
Query: 632 AILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQISD 668
L I++ DT Y VA + G S + +++
Sbjct: 62 GTLQIKNLRISDTGTYTCVATSSSGETSWSAVLDVTE 98
Score = 48.5 bits (116), Expect = 7e-07
Identities = 20/97 (20%), Positives = 33/97 (34%), Gaps = 7/97 (7%)
Query: 1134 APKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSP-DGRIKFETSENQT 1192
P I + + T+ + +G P P W G D R +
Sbjct: 8 PPIILQGPA--NQTLAVDGTALLKCKATGDPLPVISWLKEGFTFPGRDPRATIQEQGTLQ 65
Query: 1193 IYRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYVVD 1229
I R +D+G+YT ++ G S S + V +
Sbjct: 66 I----KNLRISDTGTYTCVATSSSGETSWSAVLDVTE 98
Score = 45.5 bits (108), Expect = 8e-06
Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 2/93 (2%)
Query: 183 PPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIF 242
PP I + P + +K GD +S K G D + T+ + +
Sbjct: 8 PPIILQGPANQTLAVDGTALLKCKATGDPLPVISWLKEGFTFPGRDP-RATIQEQGTL-Q 65
Query: 243 IKEIRKEDAGDYTVNLSNSSGSVSGTFTINITG 275
IK +R D G YT ++SSG S + +++T
Sbjct: 66 IKNLRISDTGTYTCVATSSSGETSWSAVLDVTE 98
Score = 45.5 bits (108), Expect = 8e-06
Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 2/93 (2%)
Query: 1790 PPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIF 1849
PP I + P + +K GD +S K G D + T+ + +
Sbjct: 8 PPIILQGPANQTLAVDGTALLKCKATGDPLPVISWLKEGFTFPGRDP-RATIQEQGTL-Q 65
Query: 1850 IKEIRKEDAGDYTVNLSNSSGSVSGTFTINITG 1882
IK +R D G YT ++SSG S + +++T
Sbjct: 66 IKNLRISDTGTYTCVATSSSGETSWSAVLDVTE 98
Score = 45.1 bits (107), Expect = 1e-05
Identities = 14/79 (17%), Positives = 24/79 (30%), Gaps = 3/79 (3%)
Query: 1430 RDITVKAGEDFSIHVPFMAFPQPAAFWFANDSIIDDSDTRVHKQLTMNSASLVVKNSQRS 1489
+ T+ + P P W D R +L +KN + S
Sbjct: 16 ANQTLAVDGTALLKCKATGDPLPVISWLKEGFTFPGRDPRA---TIQEQGTLQIKNLRIS 72
Query: 1490 DGGQYRLQLKNPAGFDTAT 1508
D G Y + +G + +
Sbjct: 73 DTGTYTCVATSSSGETSWS 91
>2eo1_A OBSCN protein, cDNA FLJ14124 FIS, clone mamma1002498;
beta-sandwich, IG-fold, structural genomics, NPPSFA; NMR
{Homo sapiens}
Length = 102
Score = 80.5 bits (199), Expect = 4e-18
Identities = 18/90 (20%), Positives = 36/90 (40%), Gaps = 5/90 (5%)
Query: 481 PEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLII 540
+ R A +A C + + ++W K ++++ S++ + A G T L++
Sbjct: 12 AKEQPAHREVQAEAGASATLSCEVAQ-AQTEVTWYKDGKKLSSSSKVRVEAVGCTRRLVV 70
Query: 541 NSVYGVDADEYVCRAVNKGGVKSTKAELII 570
+A EY C A G + L +
Sbjct: 71 QQAGQAEAGEYSCEA----GGQQLSFRLQV 96
Score = 80.5 bits (199), Expect = 4e-18
Identities = 18/90 (20%), Positives = 36/90 (40%), Gaps = 5/90 (5%)
Query: 2088 PEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLII 2147
+ R A +A C + + ++W K ++++ S++ + A G T L++
Sbjct: 12 AKEQPAHREVQAEAGASATLSCEVAQ-AQTEVTWYKDGKKLSSSSKVRVEAVGCTRRLVV 70
Query: 2148 NSVYGVDADEYVCRAVNKGGVKSTKAELII 2177
+A EY C A G + L +
Sbjct: 71 QQAGQAEAGEYSCEA----GGQQLSFRLQV 96
Score = 76.3 bits (188), Expect = 1e-16
Identities = 20/83 (24%), Positives = 35/83 (42%), Gaps = 1/83 (1%)
Query: 91 PDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHF 150
+++ G TL CE + W ++G+++SS ++ RVE G RL
Sbjct: 12 AKEQPAHREVQAEAGASATLSCEVAQ-AQTEVTWYKDGKKLSSSSKVRVEAVGCTRRLVV 70
Query: 151 NEVTDVDNGDYTCEAYNSVGFAH 173
+ + G+Y+CEA
Sbjct: 71 QQAGQAEAGEYSCEAGGQQLSFR 93
Score = 76.3 bits (188), Expect = 1e-16
Identities = 20/83 (24%), Positives = 35/83 (42%), Gaps = 1/83 (1%)
Query: 1698 PDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHF 1757
+++ G TL CE + W ++G+++SS ++ RVE G RL
Sbjct: 12 AKEQPAHREVQAEAGASATLSCEVAQ-AQTEVTWYKDGKKLSSSSKVRVEAVGCTRRLVV 70
Query: 1758 NEVTDVDNGDYTCEAYNSVGFAH 1780
+ + G+Y+CEA
Sbjct: 71 QQAGQAEAGEYSCEAGGQQLSFR 93
Score = 54.7 bits (132), Expect = 5e-09
Identities = 17/106 (16%), Positives = 37/106 (34%), Gaps = 9/106 (8%)
Query: 560 GVKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIES 619
G + +++ K P R+ + G + + + ++TWY+D + + S
Sbjct: 1 GSSGSSGKVVF---AKE--QPAHREVQ-AEAGASATLSCEVAQ-AQTEVTWYKDGKKLSS 53
Query: 620 GGHFHVETSERHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQ 665
VE L ++ A + Y A S +++
Sbjct: 54 SSKVRVEAVGCTRRLVVQQAGQAEAGEYSCEAGGQQL--SFRLQVA 97
Score = 49.7 bits (119), Expect = 3e-07
Identities = 15/105 (14%), Positives = 35/105 (33%), Gaps = 8/105 (7%)
Query: 1128 CCAPPCAPKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFET 1187
K R++ AG T++ + + W +G ++S +++ E
Sbjct: 5 SSGKVVFAKEQPAH--REVQAEAGASATLSCEVAQ-AQTEVTWYKDGKKLSSSSKVRVEA 61
Query: 1188 SENQTIYRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYVVDKPS 1232
+ A ++G Y+ + G S ++ V +
Sbjct: 62 VGCTRRLVVQQA-GQAEAGEYSCE----AGGQQLSFRLQVAGQCF 101
Score = 46.6 bits (111), Expect = 3e-06
Identities = 17/106 (16%), Positives = 43/106 (40%), Gaps = 8/106 (7%)
Query: 170 GFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDR 229
G + +S +V + + G + + A Q EV+ K+G+ + S +
Sbjct: 1 GSSGSSGKV---VFAKEQPAHREVQAEAGASATLSCEVAQAQT-EVTWYKDGKKLSSSSK 56
Query: 230 FKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITG 275
+ + + +++ + +AG+Y+ +G +F + + G
Sbjct: 57 VRVEAVGCTRRLVVQQAGQAEAGEYSCE----AGGQQLSFRLQVAG 98
Score = 46.6 bits (111), Expect = 3e-06
Identities = 17/106 (16%), Positives = 43/106 (40%), Gaps = 8/106 (7%)
Query: 1777 GFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDR 1836
G + +S +V + + G + + A Q EV+ K+G+ + S +
Sbjct: 1 GSSGSSGKV---VFAKEQPAHREVQAEAGASATLSCEVAQAQT-EVTWYKDGKKLSSSSK 56
Query: 1837 FKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITG 1882
+ + + +++ + +AG+Y+ +G +F + + G
Sbjct: 57 VRVEAVGCTRRLVVQQAGQAEAGEYSCE----AGGQQLSFRLQVAG 98
Score = 36.6 bits (85), Expect = 0.011
Identities = 18/89 (20%), Positives = 36/89 (40%), Gaps = 13/89 (14%)
Query: 1408 KQSGPVIVEEQPNKPVMDLSGVRDITVKAGED--FSIHVPFMAFPQPAAFWFANDSIIDD 1465
SG V+ ++ R++ +AG S V A Q W+ + +
Sbjct: 4 GSSGKVVFAKEQPAH-------REVQAEAGASATLSCEV---AQAQTEVTWYKDGKKLSS 53
Query: 1466 SDTRVHKQLTMNSASLVVKNSQRSDGGQY 1494
S +V + + LVV+ + +++ G+Y
Sbjct: 54 SS-KVRVEAVGCTRRLVVQQAGQAEAGEY 81
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region
plasiticity, cell adhesion; HET: PG6; 2.50A {Homo
sapiens} PDB: 3alp_A* 3u82_B 3sku_E* 2l7j_A
Length = 331
Score = 87.1 bits (215), Expect = 4e-18
Identities = 26/235 (11%), Positives = 54/235 (22%), Gaps = 18/235 (7%)
Query: 447 QYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTI-T 505
Y + + ++ + LR + CT
Sbjct: 106 VYICEF----ATFPTGNRESQLNLTVMAKPTNWIEGTQAVLRAKKGQDDKVLVATCTSAN 161
Query: 506 GCPKPTISWLKGSREITPSARHHIFAEGDTY--TLIINSVYGVDADEYVCRAVNKGGVKS 563
G P +SW + T + C
Sbjct: 162 GKPPSVVSWETRLKGEAEYQEIRNPNGTVTVISRYRLVPSREAHQQSLACIVNYHMDRFK 221
Query: 564 TKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKP-KITWYRDNEVIESGGH 622
L + P+ + D ++ + +V + P + W N + G
Sbjct: 222 ESLTLNVQYEPEVTIEG--FDGNWYLQRMDVKLTCKADANPPATEYHWTTLNGSLPKG-- 277
Query: 623 FHVETSERHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQISDRPDPPQFPT 677
++ + + Y A N +G S V++ I+ +
Sbjct: 278 ---VEAQNRTLFFKGPINYSLAGTYICEATNPIGTRSGQVEVNIT---EAAALEH 326
Score = 71.7 bits (175), Expect = 5e-13
Identities = 29/199 (14%), Positives = 51/199 (25%), Gaps = 15/199 (7%)
Query: 89 EKPDFIVPLKDLVVPL-----GKLLTLQCE-ATGTPVPKCRWLRNGREISSGARYRVETA 142
KP + V+ K+L C A G P W + + R
Sbjct: 129 AKPTNWIEGTQAVLRAKKGQDDKVLVATCTSANGKPPSVVSWETRLKGEAEYQEIRNPNG 188
Query: 143 GGVFR--LHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRID-RMPNALYIPEGD 199
+ C + S + + P + + + +
Sbjct: 189 TVTVISRYRLVPSREAHQQSLACIVNYHMDRFKESLTLNVQYEPEVTIEGFDGNWYLQRM 248
Query: 200 NTKVKIFYAGD-QPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNL 258
+ K+ + E T + + + F I AG Y
Sbjct: 249 DVKLTCKADANPPATEYHWTTLNGSLPKG-----VEAQNRTLFFKGPINYSLAGTYICEA 303
Query: 259 SNSSGSVSGTFTINITGLP 277
+N G+ SG +NIT
Sbjct: 304 TNPIGTRSGQVEVNITEAA 322
Score = 71.7 bits (175), Expect = 5e-13
Identities = 29/199 (14%), Positives = 51/199 (25%), Gaps = 15/199 (7%)
Query: 1696 EKPDFIVPLKDLVVPL-----GKLLTLQCE-ATGTPVPKCRWLRNGREISSGARYRVETA 1749
KP + V+ K+L C A G P W + + R
Sbjct: 129 AKPTNWIEGTQAVLRAKKGQDDKVLVATCTSANGKPPSVVSWETRLKGEAEYQEIRNPNG 188
Query: 1750 GGVFR--LHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRID-RMPNALYIPEGD 1806
+ C + S + + P + + + +
Sbjct: 189 TVTVISRYRLVPSREAHQQSLACIVNYHMDRFKESLTLNVQYEPEVTIEGFDGNWYLQRM 248
Query: 1807 NTKVKIFYAGD-QPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNL 1865
+ K+ + E T + + + F I AG Y
Sbjct: 249 DVKLTCKADANPPATEYHWTTLNGSLPKG-----VEAQNRTLFFKGPINYSLAGTYICEA 303
Query: 1866 SNSSGSVSGTFTINITGLP 1884
+N G+ SG +NIT
Sbjct: 304 TNPIGTRSGQVEVNITEAA 322
Score = 66.3 bits (161), Expect = 3e-11
Identities = 19/97 (19%), Positives = 28/97 (28%), Gaps = 8/97 (8%)
Query: 94 IVPLKDLVVPLGKLLTLQCEATGTPVP-KCRWLRNGREISSGARYRVETAGGVFRLHF-N 151
I + L C+A P + W + G + T L F
Sbjct: 236 IEGFDGNWYLQRMDVKLTCKADANPPATEYHWTTLNGSLPKGVEAQNRT------LFFKG 289
Query: 152 EVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDR 188
+ G Y CEA N +G V I ++
Sbjct: 290 PINYSLAGTYICEATNPIGTRSGQVEVNITEAAALEH 326
Score = 66.3 bits (161), Expect = 3e-11
Identities = 19/97 (19%), Positives = 28/97 (28%), Gaps = 8/97 (8%)
Query: 1701 IVPLKDLVVPLGKLLTLQCEATGTPVP-KCRWLRNGREISSGARYRVETAGGVFRLHF-N 1758
I + L C+A P + W + G + T L F
Sbjct: 236 IEGFDGNWYLQRMDVKLTCKADANPPATEYHWTTLNGSLPKGVEAQNRT------LFFKG 289
Query: 1759 EVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDR 1795
+ G Y CEA N +G V I ++
Sbjct: 290 PINYSLAGTYICEATNPIGTRSGQVEVNITEAAALEH 326
Score = 63.6 bits (154), Expect = 2e-10
Identities = 38/255 (14%), Positives = 69/255 (27%), Gaps = 42/255 (16%)
Query: 86 VGGEKPDFIVPLKDLVVPLGKLLTLQCEATG----TPVPKCRWLRN-------------- 127
+G + + + +G + L C + + W ++
Sbjct: 10 MGRDPSQVVQVNDSMYGFIGTDVVLHCSFANPLPSVKITQVTWQKSTNGSKQNVAIYNPS 69
Query: 128 -GREISSGARYRVETAGGVFR---LHFNEVTDVDNGDYTCEAYNSVGFAHTSS-RVKIGT 182
G + + R RVE F + + + D G Y CE S + +
Sbjct: 70 MGVSVLAPYRERVEFLRPSFTDGTIRLSRLELEDEGVYICEFATFPTGNRESQLNLTVMA 129
Query: 183 PPRIDRMPNALYIPEGDNTKVKIFYA------GDQPMEVSLTKNGR-----VVQSDDRFK 231
P + K+ A G P VS + +
Sbjct: 130 KPTNWIEGTQAVLRAKKGQDDKVLVATCTSANGKPPSVVSWETRLKGEAEYQEIRNPNGT 189
Query: 232 FTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPIGPLDVSEITK 291
TV+ Y + R+ ++ + T+N+ P I D + +
Sbjct: 190 VTVISRYRL---VPSREAHQQSLACIVNYHMDRFKESLTLNVQYEPEVTIEGFDGNWYLQ 246
Query: 292 H-----TCTLHWNPP 301
TC NPP
Sbjct: 247 RMDVKLTCKADANPP 261
Score = 63.6 bits (154), Expect = 2e-10
Identities = 38/255 (14%), Positives = 69/255 (27%), Gaps = 42/255 (16%)
Query: 1693 VGGEKPDFIVPLKDLVVPLGKLLTLQCEATG----TPVPKCRWLRN-------------- 1734
+G + + + +G + L C + + W ++
Sbjct: 10 MGRDPSQVVQVNDSMYGFIGTDVVLHCSFANPLPSVKITQVTWQKSTNGSKQNVAIYNPS 69
Query: 1735 -GREISSGARYRVETAGGVFR---LHFNEVTDVDNGDYTCEAYNSVGFAHTSS-RVKIGT 1789
G + + R RVE F + + + D G Y CE S + +
Sbjct: 70 MGVSVLAPYRERVEFLRPSFTDGTIRLSRLELEDEGVYICEFATFPTGNRESQLNLTVMA 129
Query: 1790 PPRIDRMPNALYIPEGDNTKVKIFYA------GDQPMEVSLTKNGR-----VVQSDDRFK 1838
P + K+ A G P VS + +
Sbjct: 130 KPTNWIEGTQAVLRAKKGQDDKVLVATCTSANGKPPSVVSWETRLKGEAEYQEIRNPNGT 189
Query: 1839 FTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPIGPLDVSEITK 1898
TV+ Y + R+ ++ + T+N+ P I D + +
Sbjct: 190 VTVISRYRL---VPSREAHQQSLACIVNYHMDRFKESLTLNVQYEPEVTIEGFDGNWYLQ 246
Query: 1899 H-----TCTLHWNPP 1908
TC NPP
Sbjct: 247 RMDVKLTCKADANPP 261
Score = 62.8 bits (152), Expect = 4e-10
Identities = 20/129 (15%), Positives = 37/129 (28%), Gaps = 15/129 (11%)
Query: 454 AQNEAGLSLPSSASNSVQIKDPMAAKAPEIIV-PLRNANAIQNHNAQFQCTITGCPKPT- 511
S ++ ++ PE+ + +Q + + C P T
Sbjct: 213 VNYHMD---RFKESLTLNVQYE-----PEVTIEGFDGNWYLQRMDVKLTCKADANPPATE 264
Query: 512 ISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIM 571
W + + A+ T + A Y+C A N G +S + E+ I
Sbjct: 265 YHWTTLNGSLPKGVE----AQNRT-LFFKGPINYSLAGTYICEATNPIGTRSGQVEVNIT 319
Query: 572 TAPKFNVPP 580
A
Sbjct: 320 EAAALEHHH 328
Score = 62.8 bits (152), Expect = 4e-10
Identities = 20/129 (15%), Positives = 37/129 (28%), Gaps = 15/129 (11%)
Query: 2061 AQNEAGLSLPSSASNSVQIKDPMAAKAPEIIV-PLRNANAIQNHNAQFQCTITGCPKPT- 2118
S ++ ++ PE+ + +Q + + C P T
Sbjct: 213 VNYHMD---RFKESLTLNVQYE-----PEVTIEGFDGNWYLQRMDVKLTCKADANPPATE 264
Query: 2119 ISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIM 2178
W + + A+ T + A Y+C A N G +S + E+ I
Sbjct: 265 YHWTTLNGSLPKGVE----AQNRT-LFFKGPINYSLAGTYICEATNPIGTRSGQVEVNIT 319
Query: 2179 TAPKFNVPP 2187
A
Sbjct: 320 EAAALEHHH 328
Score = 59.4 bits (143), Expect = 5e-09
Identities = 17/155 (10%), Positives = 31/155 (20%), Gaps = 8/155 (5%)
Query: 2054 QYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTI-T 2112
Y + + ++ + LR + CT
Sbjct: 106 VYICEF----ATFPTGNRESQLNLTVMAKPTNWIEGTQAVLRAKKGQDDKVLVATCTSAN 161
Query: 2113 GCPKPTISWLKGSREITPSARHHIFAEGDTY--TLIINSVYGVDADEYVCRAVNKGGVKS 2170
G P +SW + T + C
Sbjct: 162 GKPPSVVSWETRLKGEAEYQEIRNPNGTVTVISRYRLVPSREAHQQSLACIVNYHMDRFK 221
Query: 2171 TKAELIIMTAPKFNVPPRFRDTAYFESDVVVVVCV 2205
L + P+ + F Y + V + C
Sbjct: 222 ESLTLNVQYEPEVTIEG-FDGNWYLQRMDVKLTCK 255
Score = 43.6 bits (102), Expect = 6e-04
Identities = 16/107 (14%), Positives = 35/107 (32%), Gaps = 8/107 (7%)
Query: 1134 APKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPI-WTVNGDEVSPDGRIKFETSENQT 1192
P++T L + +T P T WT + +N+T
Sbjct: 231 EPEVTI-EGFDGNWYLQRMDVKLTCKADANPPATEYHWTTLNGSLPKGVEA-----QNRT 284
Query: 1193 IYRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYVVDKPSPPQGPLD 1239
++ + +G+Y + N +G+ S +V + + +
Sbjct: 285 LFFKGPINY-SLAGTYICEATNPIGTRSGQVEVNITEAAALEHHHHH 330
Score = 37.0 bits (85), Expect = 0.057
Identities = 20/140 (14%), Positives = 39/140 (27%), Gaps = 5/140 (3%)
Query: 1108 VCAVNAAGQGPWSSSSDIIMCCAPPCAPKITSDLSIRDMTVLAGEEFTIT-VPFSGRPKP 1166
+C G S ++ + A P + +R + T +G+P
Sbjct: 108 ICEFATFPTGNRESQLNLTVM-AKPTNWIEGTQAVLRAKKGQDDKVLVATCTSANGKPPS 166
Query: 1167 TPIWTVNGDEVSPDGRIKFE--TSENQTIYRNKSAKRATDSGSYTIQLVNTVGSDSASCK 1224
W + I+ T + YR ++ A S + + S
Sbjct: 167 VVSWETRLKGEAEYQEIRNPNGTVTVISRYRLVPSREA-HQQSLACIVNYHMDRFKESLT 225
Query: 1225 VYVVDKPSPPQGPLDVSDIT 1244
+ V +P D +
Sbjct: 226 LNVQYEPEVTIEGFDGNWYL 245
Score = 36.3 bits (83), Expect = 0.093
Identities = 15/111 (13%), Positives = 27/111 (24%), Gaps = 23/111 (20%)
Query: 590 KGENVV----VKIPFTGYPKPKITWYRDNEVIES---------GGHFHVETSERHAI--- 633
G +VV P ++TW + + G ER
Sbjct: 28 IGTDVVLHCSFANPLPSVKITQVTWQKSTNGSKQNVAIYNPSMGVSVLAPYRERVEFLRP 87
Query: 634 ------LTIRDASNVDTAPYR-VVAENDLGMDSAIVKIQISDRPDPPQFPT 677
+ + D Y A G + + + + +P T
Sbjct: 88 SFTDGTIRLSRLELEDEGVYICEFATFPTGNRESQLNLTVMAKPTNWIEGT 138
Score = 30.1 bits (67), Expect = 9.5
Identities = 10/73 (13%), Positives = 24/73 (32%), Gaps = 4/73 (5%)
Query: 1450 PQPAAFWFANDSIIDDSDTRVHKQL---TMNSASLVVKNSQRSDGGQYRLQLKN-PAGFD 1505
Q A + + + + R + + ++ + + D G Y + P G
Sbjct: 60 KQNVAIYNPSMGVSVLAPYRERVEFLRPSFTDGTIRLSRLELEDEGVYICEFATFPTGNR 119
Query: 1506 TATLHSRLRTLPD 1518
+ L+ + P
Sbjct: 120 ESQLNLTVMAKPT 132
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell
cycle progression, phosphorylation, disease mutation,
nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB:
4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Length = 302
Score = 86.6 bits (215), Expect = 4e-18
Identities = 25/78 (32%), Positives = 45/78 (57%)
Query: 820 DHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQLHHPKL 879
+ ++I+ E+G GAFG V++ + ++TG + AAK I E E EI+I+ HP +
Sbjct: 19 EVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYI 78
Query: 880 INLHDAFEDDDEMVLIFE 897
+ L A+ D ++ ++ E
Sbjct: 79 VKLLGAYYHDGKLWIMIE 96
>2cpc_A KIAA0657 protein; immunoglobulin domain, IG domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens}
Length = 113
Score = 81.0 bits (200), Expect = 5e-18
Identities = 18/107 (16%), Positives = 35/107 (32%), Gaps = 7/107 (6%)
Query: 477 AAKAPEIIVP--LRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGD 534
+ I+ P A++ C + P + W K E+ S + E
Sbjct: 8 TDVSSWIVYPSGKVYVAAVRLERVVLTCELCR-PWAEVRWTKDGEEVVESPALLLQKEDT 66
Query: 535 TYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPR 581
L++ +V D+ EY+C +S + + P +
Sbjct: 67 VRRLVLPAVQLEDSGEYLCEI----DDESASFTVTVTEPPVRIIYSG 109
Score = 81.0 bits (200), Expect = 5e-18
Identities = 18/107 (16%), Positives = 35/107 (32%), Gaps = 7/107 (6%)
Query: 2084 AAKAPEIIVP--LRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGD 2141
+ I+ P A++ C + P + W K E+ S + E
Sbjct: 8 TDVSSWIVYPSGKVYVAAVRLERVVLTCELCR-PWAEVRWTKDGEEVVESPALLLQKEDT 66
Query: 2142 TYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPR 2188
L++ +V D+ EY+C +S + + P +
Sbjct: 67 VRRLVLPAVQLEDSGEYLCEI----DDESASFTVTVTEPPVRIIYSG 109
Score = 79.8 bits (197), Expect = 9e-18
Identities = 24/101 (23%), Positives = 38/101 (37%), Gaps = 8/101 (7%)
Query: 87 GGEKPDFIV---PLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAG 143
G + +IV + + + L CE P + RW ++G E+ ++
Sbjct: 7 GTDVSSWIVYPSGKVYVAAVRLERVVLTCEL-CRPWAEVRWTKDGEEVVESPALLLQKED 65
Query: 144 GVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPP 184
V RL V D+G+Y CE S V + PP
Sbjct: 66 TVRRLVLPAVQLEDSGEYLCEI----DDESASFTVTVTEPP 102
Score = 79.8 bits (197), Expect = 9e-18
Identities = 24/101 (23%), Positives = 38/101 (37%), Gaps = 8/101 (7%)
Query: 1694 GGEKPDFIV---PLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAG 1750
G + +IV + + + L CE P + RW ++G E+ ++
Sbjct: 7 GTDVSSWIVYPSGKVYVAAVRLERVVLTCEL-CRPWAEVRWTKDGEEVVESPALLLQKED 65
Query: 1751 GVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPP 1791
V RL V D+G+Y CE S V + PP
Sbjct: 66 TVRRLVLPAVQLEDSGEYLCEI----DDESASFTVTVTEPP 102
Score = 57.9 bits (140), Expect = 5e-10
Identities = 12/82 (14%), Positives = 28/82 (34%), Gaps = 1/82 (1%)
Query: 573 APKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSERHA 632
+ V P + + E VV+ P ++ W +D E + ++ +
Sbjct: 10 VSSWIVYPSGKVYVAAVRLERVVLTCELCR-PWAEVRWTKDGEEVVESPALLLQKEDTVR 68
Query: 633 ILTIRDASNVDTAPYRVVAEND 654
L + D+ Y +++
Sbjct: 69 RLVLPAVQLEDSGEYLCEIDDE 90
Score = 56.3 bits (136), Expect = 2e-09
Identities = 20/103 (19%), Positives = 34/103 (33%), Gaps = 8/103 (7%)
Query: 1129 CAPPCAPKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETS 1188
S + + E +T RP WT +G+EV + +
Sbjct: 8 TDVSSWIVYPSGK--VYVAAVRLERVVLTCELC-RPWAEVRWTKDGEEVVESPALLLQKE 64
Query: 1189 ENQTIYRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYVVDKP 1231
+ + + DSG Y + + +SAS V V + P
Sbjct: 65 DTVRRLVLPAVQLE-DSGEYLCE----IDDESASFTVTVTEPP 102
Score = 48.6 bits (116), Expect = 1e-06
Identities = 21/116 (18%), Positives = 35/116 (30%), Gaps = 8/116 (6%)
Query: 175 SSRVKIGTPPRIDRMPNAL---YIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFK 231
SS P+ + + EV TK+G V
Sbjct: 2 SSGSSGTDVSSWIVYPSGKVYVAAVRLERVVLTCELCRPWA-EVRWTKDGEEVVESPALL 60
Query: 232 FTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPIGPLDVS 287
D + + ++ ED+G+Y + S +FT+ +T P I S
Sbjct: 61 LQKEDTVRRLVLPAVQLEDSGEYLCEI----DDESASFTVTVTEPPVRIIYSGPSS 112
Score = 48.6 bits (116), Expect = 1e-06
Identities = 21/116 (18%), Positives = 35/116 (30%), Gaps = 8/116 (6%)
Query: 1782 SSRVKIGTPPRIDRMPNAL---YIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFK 1838
SS P+ + + EV TK+G V
Sbjct: 2 SSGSSGTDVSSWIVYPSGKVYVAAVRLERVVLTCELCRPWA-EVRWTKDGEEVVESPALL 60
Query: 1839 FTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPIGPLDVS 1894
D + + ++ ED+G+Y + S +FT+ +T P I S
Sbjct: 61 LQKEDTVRRLVLPAVQLEDSGEYLCEI----DDESASFTVTVTEPPVRIIYSGPSS 112
Score = 36.3 bits (84), Expect = 0.019
Identities = 13/76 (17%), Positives = 25/76 (32%), Gaps = 2/76 (2%)
Query: 1419 PNKPVMDLSGVRDITVKAGEDFSIHVPFMAFPQPAAFWFANDSIIDDSDTRVHKQLTMNS 1478
+ ++ SG + E + + P W + + +S + Q
Sbjct: 10 VSSWIVYPSGKVYVAAVRLERVVLTC-ELCRPWAEVRWTKDGEEVVESP-ALLLQKEDTV 67
Query: 1479 ASLVVKNSQRSDGGQY 1494
LV+ Q D G+Y
Sbjct: 68 RRLVLPAVQLEDSGEY 83
>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo
sapiens}
Length = 350
Score = 87.1 bits (216), Expect = 5e-18
Identities = 19/80 (23%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 820 DHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSH--NLEKELIRKEIDIMNQLHHP 877
+ Y L++IG G+FG + + G + K I +S + E+E R+E+ ++ + HP
Sbjct: 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHP 83
Query: 878 KLINLHDAFEDDDEMVLIFE 897
++ ++FE++ + ++ +
Sbjct: 84 NIVQYRESFEENGSLYIVMD 103
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor,
spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis
compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB:
3kga_A* 3m42_A*
Length = 299
Score = 86.2 bits (214), Expect = 5e-18
Identities = 19/97 (19%), Positives = 45/97 (46%), Gaps = 11/97 (11%)
Query: 807 VPQPVDIKTSSVYDHYDIL-EEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIR 865
V + IK +++ D Y + + +G G G V + ++T FA K + + R
Sbjct: 4 VKSGLQIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ-----DCPKAR 58
Query: 866 KEIDIMNQL-HHPKLINLHDAFED----DDEMVLIFE 897
+E+++ + P ++ + D +E+ ++++ E
Sbjct: 59 REVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVME 95
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer,
anticancer drug design; HET: YCF; 1.77A {Homo sapiens}
PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A*
2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A*
2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Length = 322
Score = 86.6 bits (215), Expect = 5e-18
Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 8/86 (9%)
Query: 813 IKTSSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIP--------VSHNLEKELI 864
+ ++ D Y + + +G+GA G V ERKT A K I +
Sbjct: 3 VYPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNV 62
Query: 865 RKEIDIMNQLHHPKLINLHDAFEDDD 890
EI+I+ +L+HP +I + + F+ +D
Sbjct: 63 ETEIEILKKLNHPCIIKIKNFFDAED 88
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex,
costimulation, glycoprotein, immunoglo domain, membrane,
transmembrane, receptor; 1.60A {Mus musculus} PDB:
3bp5_B 3rnq_B 3bov_A 3rnk_B
Length = 202
Score = 83.6 bits (206), Expect = 6e-18
Identities = 25/209 (11%), Positives = 55/209 (26%), Gaps = 28/209 (13%)
Query: 483 IIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREIT------PSARHHIFAEGDT- 535
+ P + +C + ++ S + S R + E
Sbjct: 5 VTAPKEVYTVDVGSSVSLECDFDRRECTELEGIRASLQKVENDTSLQSERATLLEEQLPL 64
Query: 536 --YTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPRFRDTAYFDKGEN 593
I SV D+ +Y C + + + +
Sbjct: 65 GKALFHIPSVQVRDSGQYRCLVICGAAWDYKYLTVKVKASYMRIDTRILEVP----GTGE 120
Query: 594 VVVKIPFTGYPKPKITWYRDNE------VIESGGHFHVETSERHAILTIRDASNVDTAPY 647
V + GYP +++W + + G + V + L ++ + + +
Sbjct: 121 VQLTCQARGYPLAEVSWQNVSVPANTSHIRTPEGLYQVTSV-----LRLKPQPSRN---F 172
Query: 648 RVVAENDLGMDSAIVKIQISDRPDPPQFP 676
+ N + I R P+ P
Sbjct: 173 SCMFWNAHMKELTSAIIDPLSRM-EPKVP 200
Score = 66.6 bits (162), Expect = 4e-12
Identities = 27/202 (13%), Positives = 61/202 (30%), Gaps = 22/202 (10%)
Query: 94 IVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARY----RVE-----TAGG 144
P + V +G ++L+C+ + +R + R G
Sbjct: 6 TAPKEVYTVDVGSSVSLECDFDRRECTELEGIRASLQKVENDTSLQSERATLLEEQLPLG 65
Query: 145 VFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVK 204
H V D+G Y C + + VK+ L +P ++
Sbjct: 66 KALFHIPSVQVRDSGQYRCLVICGAAWDYKYLTVKVKASYMRI-DTRILEVPGTGEVQLT 124
Query: 205 IFYAGDQPMEV-----SLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLS 259
G EV S+ N +++ + Y + + ++ + + +++
Sbjct: 125 CQARGYPLAEVSWQNVSVPANTSHIRTPEGL-------YQVTSVLRLKPQPSRNFSCMFW 177
Query: 260 NSSGSVSGTFTINITGLPGPPI 281
N+ + I+ P +
Sbjct: 178 NAHMKELTSAIIDPLSRMEPKV 199
Score = 66.6 bits (162), Expect = 4e-12
Identities = 27/202 (13%), Positives = 61/202 (30%), Gaps = 22/202 (10%)
Query: 1701 IVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARY----RVE-----TAGG 1751
P + V +G ++L+C+ + +R + R G
Sbjct: 6 TAPKEVYTVDVGSSVSLECDFDRRECTELEGIRASLQKVENDTSLQSERATLLEEQLPLG 65
Query: 1752 VFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVK 1811
H V D+G Y C + + VK+ L +P ++
Sbjct: 66 KALFHIPSVQVRDSGQYRCLVICGAAWDYKYLTVKVKASYMRI-DTRILEVPGTGEVQLT 124
Query: 1812 IFYAGDQPMEV-----SLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLS 1866
G EV S+ N +++ + Y + + ++ + + +++
Sbjct: 125 CQARGYPLAEVSWQNVSVPANTSHIRTPEGL-------YQVTSVLRLKPQPSRNFSCMFW 177
Query: 1867 NSSGSVSGTFTINITGLPGPPI 1888
N+ + I+ P +
Sbjct: 178 NAHMKELTSAIIDPLSRMEPKV 199
Score = 53.5 bits (128), Expect = 1e-07
Identities = 15/124 (12%), Positives = 32/124 (25%), Gaps = 12/124 (9%)
Query: 2090 IIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREIT------PSARHHIFAEGDT- 2142
+ P + +C + ++ S + S R + E
Sbjct: 5 VTAPKEVYTVDVGSSVSLECDFDRRECTELEGIRASLQKVENDTSLQSERATLLEEQLPL 64
Query: 2143 --YTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPRFRDTAYFESDVV 2200
I SV D+ +Y C + + + + + R + V
Sbjct: 65 GKALFHIPSVQVRDSGQYRCLVICGAAWDYKYLTVKVKASY---MRIDTRILEVPGTGEV 121
Query: 2201 VVVC 2204
+ C
Sbjct: 122 QLTC 125
Score = 52.0 bits (124), Expect = 4e-07
Identities = 18/106 (16%), Positives = 42/106 (39%), Gaps = 6/106 (5%)
Query: 86 VGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGV 145
V + + + L VP + L C+A G P+ + W ++ T G+
Sbjct: 99 VKVKASYMRIDTRILEVPGTGEVQLTCQARGYPLAEVSWQNVSVPANTSHI---RTPEGL 155
Query: 146 FRLHFN-EVTDVDNGDYTCEAYNSVGFAHTSSRVKI--GTPPRIDR 188
+++ + + +++C +N+ TS+ + P++ R
Sbjct: 156 YQVTSVLRLKPQPSRNFSCMFWNAHMKELTSAIIDPLSRMEPKVPR 201
Score = 52.0 bits (124), Expect = 4e-07
Identities = 18/106 (16%), Positives = 42/106 (39%), Gaps = 6/106 (5%)
Query: 1693 VGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGV 1752
V + + + L VP + L C+A G P+ + W ++ T G+
Sbjct: 99 VKVKASYMRIDTRILEVPGTGEVQLTCQARGYPLAEVSWQNVSVPANTSHI---RTPEGL 155
Query: 1753 FRLHFN-EVTDVDNGDYTCEAYNSVGFAHTSSRVKI--GTPPRIDR 1795
+++ + + +++C +N+ TS+ + P++ R
Sbjct: 156 YQVTSVLRLKPQPSRNFSCMFWNAHMKELTSAIIDPLSRMEPKVPR 201
Score = 51.6 bits (123), Expect = 6e-07
Identities = 30/207 (14%), Positives = 53/207 (25%), Gaps = 20/207 (9%)
Query: 381 PGIPVVTQVGGDFV---NLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQI 437
P VG + + + G R S +R +
Sbjct: 8 PKEVYTVDVGSSVSLECDFDRRECTELEGIRA--SLQKVENDTSLQSERATLLEEQLPLG 65
Query: 438 N----IPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAI 493
IP++ ++R A + +K + + R
Sbjct: 66 KALFHIPSVQVRDSGQYRCLVICGAA-----WDYKYLTVKVKASYMRIDT----RILEVP 116
Query: 494 QNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVC 553
Q C G P +SW S S H EG + + + + C
Sbjct: 117 GTGEVQLTCQARGYPLAEVSWQNVSVPANTS--HIRTPEGLYQVTSVLRLKPQPSRNFSC 174
Query: 554 RAVNKGGVKSTKAELIIMTAPKFNVPP 580
N + T A + ++ + VP
Sbjct: 175 MFWNAHMKELTSAIIDPLSRMEPKVPR 201
Score = 51.6 bits (123), Expect = 6e-07
Identities = 30/207 (14%), Positives = 53/207 (25%), Gaps = 20/207 (9%)
Query: 1988 PGIPVVTQVGGDFV---NLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQI 2044
P VG + + + G R S +R +
Sbjct: 8 PKEVYTVDVGSSVSLECDFDRRECTELEGIRA--SLQKVENDTSLQSERATLLEEQLPLG 65
Query: 2045 N----IPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAI 2100
IP++ ++R A + +K + + R
Sbjct: 66 KALFHIPSVQVRDSGQYRCLVICGAA-----WDYKYLTVKVKASYMRIDT----RILEVP 116
Query: 2101 QNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVC 2160
Q C G P +SW S S H EG + + + + C
Sbjct: 117 GTGEVQLTCQARGYPLAEVSWQNVSVPANTS--HIRTPEGLYQVTSVLRLKPQPSRNFSC 174
Query: 2161 RAVNKGGVKSTKAELIIMTAPKFNVPP 2187
N + T A + ++ + VP
Sbjct: 175 MFWNAHMKELTSAIIDPLSRMEPKVPR 201
Score = 42.7 bits (100), Expect = 5e-04
Identities = 24/138 (17%), Positives = 45/138 (32%), Gaps = 18/138 (13%)
Query: 1432 ITVKAGEDFSIHVPFMAFPQPAAFWFANDSIIDDSD--------TRVHKQLTMNSASLVV 1483
TV G S+ F ++D T + +QL + A +
Sbjct: 12 YTVDVGSSVSLECDFDRRECTELEGIRASLQKVENDTSLQSERATLLEEQLPLGKALFHI 71
Query: 1484 KNSQRSDGGQYRLQLKNPAGFDTATLHSRLRTLPDSVNPRCHLPSSTSKERPK-----FP 1538
+ Q D GQYR + A +D L +++ ++ R T + + +P
Sbjct: 72 PSVQVRDSGQYRCLVICGAAWDYKYLTVKVKASYMRIDTRILEVPGTGEVQLTCQARGYP 131
Query: 1539 THPNHQPWLKWARASLTS 1556
+ W S+ +
Sbjct: 132 -----LAEVSWQNVSVPA 144
Score = 42.3 bits (99), Expect = 6e-04
Identities = 13/107 (12%), Positives = 29/107 (27%), Gaps = 9/107 (8%)
Query: 591 GENVVVKIPFTGYPKPKITWYRDNEVIESGGH---------FHVETSERHAILTIRDASN 641
G +V ++ F ++ R + + A+ I
Sbjct: 17 GSSVSLECDFDRRECTELEGIRASLQKVENDTSLQSERATLLEEQLPLGKALFHIPSVQV 76
Query: 642 VDTAPYRVVAENDLGMDSAIVKIQISDRPDPPQFPTVEDIGHDSLAL 688
D+ YR + D + +++ +E G + L
Sbjct: 77 RDSGQYRCLVICGAAWDYKYLTVKVKASYMRIDTRILEVPGTGEVQL 123
Score = 38.9 bits (90), Expect = 0.009
Identities = 13/98 (13%), Positives = 28/98 (28%), Gaps = 7/98 (7%)
Query: 1139 SDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQTIYRNKS 1198
+ R + V E +T G P W + + +Y+ S
Sbjct: 106 MRIDTRILEVPGTGEVQLTCQARGYPLAEVSWQNVSVPANTS-----HIRTPEGLYQVTS 160
Query: 1199 A--KRATDSGSYTIQLVNTVGSDSASCKVYVVDKPSPP 1234
+ S +++ N + S + + + P
Sbjct: 161 VLRLKPQPSRNFSCMFWNAHMKELTSAIIDPLSRMEPK 198
Score = 36.6 bits (84), Expect = 0.050
Identities = 19/139 (13%), Positives = 33/139 (23%), Gaps = 16/139 (11%)
Query: 1147 TVLAGEEFTITVPFSGRPKPTPIWTVNG----DEVSPDGRIKFETSENQTIYRNKSAK-- 1200
TV G ++ F R + + + E Q
Sbjct: 13 TVDVGSSVSLECDFDRRECTELEGIRASLQKVENDTSLQSERATLLEEQLPLGKALFHIP 72
Query: 1201 --RATDSGSYTIQLVNTVGSDSASCKVYVVDKPSPPQGPLDVSDITPE---SCSLSWKPP 1255
+ DSG Y ++ D V V + T E +C P
Sbjct: 73 SVQVRDSGQYRCLVICGAAWDYKYLTVKVKASYMRIDTRILEVPGTGEVQLTCQARGYPL 132
Query: 1256 -----LDDGGSPITNYVVE 1269
+ T+++
Sbjct: 133 AEVSWQNVSVPANTSHIRT 151
Score = 31.2 bits (70), Expect = 3.0
Identities = 10/75 (13%), Positives = 21/75 (28%), Gaps = 3/75 (4%)
Query: 1449 FPQPAAFWFANDSIIDDSDTRVHKQLTMNSASLVVKNSQRSDGGQYRLQLKNPAGFDTAT 1508
+P W + S R + L ++ L +K + N + +
Sbjct: 130 YPLAEVSWQNVSVPANTSHIRTPEGLYQVTSVLRLKP---QPSRNFSCMFWNAHMKELTS 186
Query: 1509 LHSRLRTLPDSVNPR 1523
+ + PR
Sbjct: 187 AIIDPLSRMEPKVPR 201
>1nn8_R CD155 antigen, poliovirus receptor; icosahedral virus,
picornavirus, virus/receptor complex; 15.00A {Homo
sapiens} SCOP: i.6.1.1 PDB: 1dgi_R
Length = 302
Score = 85.9 bits (212), Expect = 6e-18
Identities = 41/303 (13%), Positives = 84/303 (27%), Gaps = 38/303 (12%)
Query: 377 KPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQ 436
+ + V+Q+ +W + + G + S + V + A +
Sbjct: 25 QVPNMEVTHVSQL-------TWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELR 77
Query: 437 ---INIPNLI---EGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNA 490
+ + L EG Y + S +++ P+ ++
Sbjct: 78 NASLRMFGLRVEDEGN-YTCLFVTFPQG----SRSVDIWLRVLAK-----PQNTAEVQKV 127
Query: 491 NAIQNHNAQFQCT-ITGCPKPTISWLKGSREITPSARHHIFAEGD---TYTLIINSVYGV 546
+C G P I+W + +++ F G T I+ V
Sbjct: 128 QLTGEPVPMARCVSTGGRPPAQITWHSDLGGMPNTSQVPGFLSGTVTVTSLWILVPSSQV 187
Query: 547 DADEYVCRAVNKGGVKS--TKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYP 604
D C+ ++ K L + P+ ++ D ++ + P
Sbjct: 188 DGKNVTCKVEHESFEKPQLLTVNLTVYYPPEVSISGY--DNNWYLGQNEATLTCDARSNP 245
Query: 605 KP-KITWYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAPYRVVAENDLGMDSAIVK 663
+P W + + A L IR N LG A +
Sbjct: 246 EPTGYNWSTTMGPLPPF------AVAQGAQLLIRPVDKPINTTLICNVTNALGARQAELT 299
Query: 664 IQI 666
+Q+
Sbjct: 300 VQV 302
Score = 79.8 bits (196), Expect = 7e-16
Identities = 23/192 (11%), Positives = 60/192 (31%), Gaps = 14/192 (7%)
Query: 90 KPDFIVPLKDLVVPLGKLLTLQCEAT-GTPVPKCRWLRNGREISSGARYRVETAGGVF-- 146
KP ++ + + + +C +T G P + W + + + ++ +G V
Sbjct: 117 KPQNTAEVQKVQLTGEPVPMARCVSTGGRPPAQITWHSDLGGMPNTSQVPGFLSGTVTVT 176
Query: 147 -RLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKI---GTPPRIDRMPNALYIPEGDNTK 202
+ VD + TC+ + V + P + + +
Sbjct: 177 SLWILVPSSQVDGKNVTCKVEHESFEKPQLLTVNLTVYYPPEVSISGYDNNWYLGQNEAT 236
Query: 203 VK-IFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNS 261
+ + +P + + + + L I+ + K N++N+
Sbjct: 237 LTCDARSNPEPTGYNWSTTMGPLPPFAVAQGAQL------LIRPVDKPINTTLICNVTNA 290
Query: 262 SGSVSGTFTINI 273
G+ T+ +
Sbjct: 291 LGARQAELTVQV 302
Score = 79.8 bits (196), Expect = 7e-16
Identities = 23/192 (11%), Positives = 60/192 (31%), Gaps = 14/192 (7%)
Query: 1697 KPDFIVPLKDLVVPLGKLLTLQCEAT-GTPVPKCRWLRNGREISSGARYRVETAGGVF-- 1753
KP ++ + + + +C +T G P + W + + + ++ +G V
Sbjct: 117 KPQNTAEVQKVQLTGEPVPMARCVSTGGRPPAQITWHSDLGGMPNTSQVPGFLSGTVTVT 176
Query: 1754 -RLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKI---GTPPRIDRMPNALYIPEGDNTK 1809
+ VD + TC+ + V + P + + +
Sbjct: 177 SLWILVPSSQVDGKNVTCKVEHESFEKPQLLTVNLTVYYPPEVSISGYDNNWYLGQNEAT 236
Query: 1810 VK-IFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNS 1868
+ + +P + + + + L I+ + K N++N+
Sbjct: 237 LTCDARSNPEPTGYNWSTTMGPLPPFAVAQGAQL------LIRPVDKPINTTLICNVTNA 290
Query: 1869 SGSVSGTFTINI 1880
G+ T+ +
Sbjct: 291 LGARQAELTVQV 302
Score = 79.0 bits (194), Expect = 1e-15
Identities = 36/306 (11%), Positives = 77/306 (25%), Gaps = 41/306 (13%)
Query: 483 IIVPLRNANAIQNHNAQFQCTITGCPKPT-----ISWLK-------------GSREITPS 524
++ + C + ++W + + S
Sbjct: 3 VVQAPTQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSES 62
Query: 525 ARHHIF-----AEGDTYTLIINSVYGVDADEYVCRAVNK-GGVKSTKAELIIMTAPKFNV 578
R AE +L + + D Y C V G +S L ++ P+
Sbjct: 63 KRLEFVAARLGAELRNASLRMFGLRVEDEGNYTCLFVTFPQGSRSVDIWLRVLAKPQNTA 122
Query: 579 PPRFRDTAYFDKGENVVVK-IPFTGYPKPKITWYRDNEVIESGGHFHVETSER---HAIL 634
+ + + + G P +ITW+ D + + S ++
Sbjct: 123 EVQ---KVQLTGEPVPMARCVSTGGRPPAQITWHSDLGGMPNTSQVPGFLSGTVTVTSLW 179
Query: 635 TIRDASNVDTAPYRVVAENDLGMDSAIVKIQIS----DRPDPPQFPTVEDIGHDSLALVW 690
+ +S VD E++ ++ + ++ + +G + L
Sbjct: 180 ILVPSSQVDGKNVTCKVEHESFEKPQLLTVNLTVYYPPEVSISGYDNNWYLGQNEATLTC 239
Query: 691 RAPIWDGGSNITNYIVEKREHPMSSWIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGR 750
A T Y P+ + + I + N G
Sbjct: 240 DA---RSNPEPTGYNWSTTMGPLPPFAVAQGAQLL---IRPVDKPINTTLICNVTNALGA 293
Query: 751 SDPSTT 756
T
Sbjct: 294 RQAELT 299
Score = 64.0 bits (155), Expect = 1e-10
Identities = 17/96 (17%), Positives = 24/96 (25%), Gaps = 7/96 (7%)
Query: 86 VGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVP-KCRWLRNGREISSGARYRVETAGG 144
V I + TL C+A P P W + G
Sbjct: 213 VYYPPEVSISGYDNNWYLGQNEATLTCDARSNPEPTGYNWSTTMGPLPP----FAVAQGA 268
Query: 145 VFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKI 180
L V N C N++G V++
Sbjct: 269 Q--LLIRPVDKPINTTLICNVTNALGARQAELTVQV 302
Score = 64.0 bits (155), Expect = 1e-10
Identities = 17/96 (17%), Positives = 24/96 (25%), Gaps = 7/96 (7%)
Query: 1693 VGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVP-KCRWLRNGREISSGARYRVETAGG 1751
V I + TL C+A P P W + G
Sbjct: 213 VYYPPEVSISGYDNNWYLGQNEATLTCDARSNPEPTGYNWSTTMGPLPP----FAVAQGA 268
Query: 1752 VFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKI 1787
L V N C N++G V++
Sbjct: 269 Q--LLIRPVDKPINTTLICNVTNALGARQAELTVQV 302
Score = 62.0 bits (150), Expect = 5e-10
Identities = 30/234 (12%), Positives = 67/234 (28%), Gaps = 30/234 (12%)
Query: 1984 KPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQ 2043
+ + V+Q+ +W + + G + S + V + A +
Sbjct: 25 QVPNMEVTHVSQL-------TWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELR 77
Query: 2044 ---INIPNLI---EGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNA 2097
+ + L EG Y + S +++ P+ ++
Sbjct: 78 NASLRMFGLRVEDEGN-YTCLFVTFPQG----SRSVDIWLRVLAK-----PQNTAEVQKV 127
Query: 2098 NAIQNHNAQFQCT-ITGCPKPTISWLKGSREITPSARHHIFAEGD---TYTLIINSVYGV 2153
+C G P I+W + +++ F G T I+ V
Sbjct: 128 QLTGEPVPMARCVSTGGRPPAQITWHSDLGGMPNTSQVPGFLSGTVTVTSLWILVPSSQV 187
Query: 2154 DADEYVCRAVNKGGVKS--TKAELIIMTAPKFNVPPRFRDTAYFESDVVVVVCV 2205
D C+ ++ K L + P+ ++ + Y + + C
Sbjct: 188 DGKNVTCKVEHESFEKPQLLTVNLTVYYPPEVSISGY-DNNWYLGQNEATLTCD 240
Score = 61.3 bits (148), Expect = 1e-09
Identities = 32/244 (13%), Positives = 64/244 (26%), Gaps = 35/244 (14%)
Query: 93 FIVPLKDLVVPLGKLLTLQCEATGTPVP-----KCRWLRNG-------------REISSG 134
+ + LG +TL C + + W R+G S
Sbjct: 3 VVQAPTQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSES 62
Query: 135 ARYRVETAG-----GVFRLHFNEVTDVDNGDYTCEAYNSV-GFAHTSSRVKIGTPPRIDR 188
R A L + D G+YTC G +++ P+
Sbjct: 63 KRLEFVAARLGAELRNASLRMFGLRVEDEGNYTCLFVTFPQGSRSVDIWLRVLAKPQNTA 122
Query: 189 MPNALYIPEGDNTKVK-IFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYII---IFIK 244
+ + + + G P +++ + + + + + + +
Sbjct: 123 EVQKVQLTGEPVPMARCVSTGGRPPAQITWHSDLGGMPNTSQVPGFLSGTVTVTSLWILV 182
Query: 245 EIRKEDAGDYT--VNLSNSSGSVSGTFTINITGLPGPPIGPLDVSEITKH-----TCTLH 297
+ D + T V + T + + P I D + TC
Sbjct: 183 PSSQVDGKNVTCKVEHESFEKPQLLTVNLTVYYPPEVSISGYDNNWYLGQNEATLTCDAR 242
Query: 298 WNPP 301
NP
Sbjct: 243 SNPE 246
Score = 61.3 bits (148), Expect = 1e-09
Identities = 32/244 (13%), Positives = 64/244 (26%), Gaps = 35/244 (14%)
Query: 1700 FIVPLKDLVVPLGKLLTLQCEATGTPVP-----KCRWLRNG-------------REISSG 1741
+ + LG +TL C + + W R+G S
Sbjct: 3 VVQAPTQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSES 62
Query: 1742 ARYRVETAG-----GVFRLHFNEVTDVDNGDYTCEAYNSV-GFAHTSSRVKIGTPPRIDR 1795
R A L + D G+YTC G +++ P+
Sbjct: 63 KRLEFVAARLGAELRNASLRMFGLRVEDEGNYTCLFVTFPQGSRSVDIWLRVLAKPQNTA 122
Query: 1796 MPNALYIPEGDNTKVK-IFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYII---IFIK 1851
+ + + + G P +++ + + + + + + +
Sbjct: 123 EVQKVQLTGEPVPMARCVSTGGRPPAQITWHSDLGGMPNTSQVPGFLSGTVTVTSLWILV 182
Query: 1852 EIRKEDAGDYT--VNLSNSSGSVSGTFTINITGLPGPPIGPLDVSEITKH-----TCTLH 1904
+ D + T V + T + + P I D + TC
Sbjct: 183 PSSQVDGKNVTCKVEHESFEKPQLLTVNLTVYYPPEVSISGYDNNWYLGQNEATLTCDAR 242
Query: 1905 WNPP 1908
NP
Sbjct: 243 SNPE 246
Score = 60.9 bits (147), Expect = 1e-09
Identities = 20/118 (16%), Positives = 38/118 (32%), Gaps = 12/118 (10%)
Query: 2061 AQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPT-I 2119
++E+ P + ++ + P I N + + A C P+PT
Sbjct: 196 VEHESFEK-PQLLTVNLTVYYPP----EVSISGYDNNWYLGQNEATLTCDARSNPEPTGY 250
Query: 2120 SWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELII 2177
+W + P FA L+I V +C N G + + + +
Sbjct: 251 NWSTTMGPLPP------FAVAQGAQLLIRPVDKPINTTLICNVTNALGARQAELTVQV 302
Score = 40.9 bits (95), Expect = 0.004
Identities = 16/123 (13%), Positives = 30/123 (24%), Gaps = 9/123 (7%)
Query: 1108 VCAVNAAGQGPWSSSSDIIMCCAPPCAPKITSDLSIRDMTVLAGEEFTIT-VPFSGRPKP 1166
C QG S + + A P + + V GRP
Sbjct: 95 TCLFVTFPQGSRSVDIWLRVL-AKPQNTAEVQKV-----QLTGEPVPMARCVSTGGRPPA 148
Query: 1167 TPIWTVNGDEVSPDGRIKFETSENQTIYRN--KSAKRATDSGSYTIQLVNTVGSDSASCK 1224
W + + ++ S T+ D + T ++ +
Sbjct: 149 QITWHSDLGGMPNTSQVPGFLSGTVTVTSLWILVPSSQVDGKNVTCKVEHESFEKPQLLT 208
Query: 1225 VYV 1227
V +
Sbjct: 209 VNL 211
Score = 39.3 bits (91), Expect = 0.010
Identities = 40/232 (17%), Positives = 59/232 (25%), Gaps = 44/232 (18%)
Query: 1144 RDMTVLAGEEFTITVPFSGRPKPTP-----IWT-------------VNGDEVSPDGRIKF 1185
+ G+ T+ W G S R++F
Sbjct: 8 TQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEF 67
Query: 1186 ETSENQTIYRNKSAK----RATDSGSYTIQLVNTV-GSDSASCKVYVVDKPSPPQGPLDV 1240
+ RN S + R D G+YT V GS S + V+ KP V
Sbjct: 68 VAARLGAELRNASLRMFGLRVEDEGNYTCLFVTFPQGSRSVDIWLRVLAKPQNTAEVQKV 127
Query: 1241 S-----DITPESCSLSWKPP------LDDGGSPITNYVVEKYESATGFWSKLSSFVRSPA 1289
S +PP D GG P T+ V S S
Sbjct: 128 QLTGEPVPMARCVSTGGRPPAQITWHSDLGGMPNTSQVPGFLSGTVTVTSLWILVPSSQV 187
Query: 1290 YDVFGLETNRQYRFRVRAENQYGVSEPLELDNSITAKFPFTVPDPPGQPQIV 1341
+ E++ +P L ++T +P V
Sbjct: 188 DGK---------NVTCKVEHE-SFEKPQLLTVNLTVYYPPEVSISGYDNNWY 229
Score = 37.8 bits (87), Expect = 0.030
Identities = 20/122 (16%), Positives = 41/122 (33%), Gaps = 14/122 (11%)
Query: 1108 VC-AVNAAGQGPWSSSSDIIMCCAPPCAPKITSDLSIRDMTVLAGEEFTITVPFSGRPKP 1166
C + + + P + ++ + P I+ + L E T+T P+P
Sbjct: 193 TCKVEHESFEKPQLLTVNLTV--YYPPEVSISG---YDNNWYLGQNEATLTCDARSNPEP 247
Query: 1167 TPI-WTVNGDEVSPDGRIKFETSENQTIYRNKSAKRATDSGSYTIQLVNTVGSDSASCKV 1225
T W+ + P F ++ + K + + + N +G+ A V
Sbjct: 248 TGYNWSTTMGPLPP-----FAVAQGAQLLIRPVDK--PINTTLICNVTNALGARQAELTV 300
Query: 1226 YV 1227
V
Sbjct: 301 QV 302
Score = 35.8 bits (82), Expect = 0.12
Identities = 23/168 (13%), Positives = 49/168 (29%), Gaps = 21/168 (12%)
Query: 1348 ATLMWDRPRTDGGSKIQGYKMLLKTPTGELPTTIWSKIRPTSS----TVYCKDTTMNSSN 1403
A + W + + +G + T + P+S V C + S
Sbjct: 148 AQITWHS----DLGGMPNTSQVPGFLSGTVTVTSLWILVPSSQVDGKNVTC--KVEHESF 201
Query: 1404 SEPGKQSGPVIVEEQPNKPVMDLSGVRDITVKAGEDFSIHVPFMAFPQPAAF-WFANDSI 1462
+P + + V P + +SG + + ++ + P+P + W
Sbjct: 202 EKPQLLTVNLTVYY---PPEVSISGYDNNWYLGQNEATLTCDARSNPEPTGYNWSTTMGP 258
Query: 1463 IDDSDTRVHKQLTMNSASLVVKNSQRSDGGQYRLQLKNPAGFDTATLH 1510
+ A L+++ + + N G A L
Sbjct: 259 LPPF-------AVAQGAQLLIRPVDKPINTTLICNVTNALGARQAELT 299
Score = 33.9 bits (77), Expect = 0.60
Identities = 22/191 (11%), Positives = 48/191 (25%), Gaps = 16/191 (8%)
Query: 1332 PDPPGQPQIVDWDTNNATLMWDRPRTDGGSKIQG---YKMLLKTPTGELP--TTIWSKIR 1386
+ W + + G + + EL + +R
Sbjct: 28 NMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRNASLRMFGLR 87
Query: 1387 PTSSTVY-CKDTTMNSSNSEPGKQSGPVIVEEQPNKPVMDLSGVRDITVKAGEDFSIH-V 1444
Y C T + + V +P V+ + + V
Sbjct: 88 VEDEGNYTCLFVTFPQGSRS---VDIWLRVLAKPQNTA----EVQKVQLTGEPVPMARCV 140
Query: 1445 PFMAFPQPAAFWFANDS-IIDDSDTRVHKQLTMNSAS-LVVKNSQRSDGGQYRLQLKNPA 1502
P W ++ + + S T+ S ++ S + DG ++++ +
Sbjct: 141 STGGRPPAQITWHSDLGGMPNTSQVPGFLSGTVTVTSLWILVPSSQVDGKNVTCKVEHES 200
Query: 1503 GFDTATLHSRL 1513
L L
Sbjct: 201 FEKPQLLTVNL 211
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human
coxsackievirus A21, cryo-electron
microscopy,virus-receptor complex, icosahedral virus;
HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3
b.1.1.4 b.1.1.4 b.1.1.4
Length = 450
Score = 88.0 bits (217), Expect = 7e-18
Identities = 65/495 (13%), Positives = 141/495 (28%), Gaps = 74/495 (14%)
Query: 98 KDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVD 157
+++P G + + C + E + + + V +
Sbjct: 7 SKVILPRGGSVLVTCSTSCDQPMLLGI-----ETPLPKKELLLPGNNRKVYELSNVQE-- 59
Query: 158 NGDYTCEAYNSVGFAHTSSRVKIGTPP-RIDRMPNALYIPEGDNTKVKIFYAGDQP---M 213
+ C + G + + + + P R++ P + P G N ++ G P +
Sbjct: 60 DSQPMCYSNCPDGQSTAKTFLTVYWTPERVELAPLPSWQPVGKNLTLRCQVEGGAPRANL 119
Query: 214 EVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGS--------V 265
V L + + ++ + + + R +++
Sbjct: 120 TVVLLRGEKELKREP---AVGEPAEVTTTVLVRRDHHGANFSCRTELDLRPQGLELFENT 176
Query: 266 SGTFTINITGLPGPPIGP-----LDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDIS 320
S + + LP P L+V C+L P + +V + ++R
Sbjct: 177 SAPYQLQTFVLPATPPQLVSPRVLEVDTQGTVVCSLDGLFPVSE--AQVHLALGDQRLNP 234
Query: 321 MPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSP 380
+ S + V +T E + G ++ + Y P+P
Sbjct: 235 TVTYGNDSFS---AKASVS-VTAEDEGTQRLTCAVILGNQ----SQETLQTVTIYSFPAP 286
Query: 381 PGIPVVTQVG-GDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINI 439
I +V G V + + +++ + +G A +
Sbjct: 287 NVILTKPEVSEGTEVTVKCEA---HPRAKVTLNGVPAQPLGPRAQLLLKAT--------- 334
Query: 440 PNLIEGRQYEFRVYAQNE-AGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNAN--AIQNH 496
GR + A E AG + + + +++ P + N +N
Sbjct: 335 -PEDNGRSFSCS--ATLEVAGQLIHKNQTRELRVLYG-----PRLDERDCPGNWTWPENS 386
Query: 497 NAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAV 556
C G P P + LK P +V Y+CRA
Sbjct: 387 QQTPMCQAWGNPLPELKCLKDGTFPLPI-------------GESVTVTRDLEGTYLCRAR 433
Query: 557 NKGGVKSTKAELIIM 571
+ G + + + ++
Sbjct: 434 STQGEVTREVTVNVL 448
Score = 88.0 bits (217), Expect = 7e-18
Identities = 65/495 (13%), Positives = 141/495 (28%), Gaps = 74/495 (14%)
Query: 1705 KDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVD 1764
+++P G + + C + E + + + V +
Sbjct: 7 SKVILPRGGSVLVTCSTSCDQPMLLGI-----ETPLPKKELLLPGNNRKVYELSNVQE-- 59
Query: 1765 NGDYTCEAYNSVGFAHTSSRVKIGTPP-RIDRMPNALYIPEGDNTKVKIFYAGDQP---M 1820
+ C + G + + + + P R++ P + P G N ++ G P +
Sbjct: 60 DSQPMCYSNCPDGQSTAKTFLTVYWTPERVELAPLPSWQPVGKNLTLRCQVEGGAPRANL 119
Query: 1821 EVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGS--------V 1872
V L + + ++ + + + R +++
Sbjct: 120 TVVLLRGEKELKREP---AVGEPAEVTTTVLVRRDHHGANFSCRTELDLRPQGLELFENT 176
Query: 1873 SGTFTINITGLPGPPIGP-----LDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDIS 1927
S + + LP P L+V C+L P + +V + ++R
Sbjct: 177 SAPYQLQTFVLPATPPQLVSPRVLEVDTQGTVVCSLDGLFPVSE--AQVHLALGDQRLNP 234
Query: 1928 MPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSP 1987
+ S + V +T E + G ++ + Y P+P
Sbjct: 235 TVTYGNDSFS---AKASVS-VTAEDEGTQRLTCAVILGNQ----SQETLQTVTIYSFPAP 286
Query: 1988 PGIPVVTQVG-GDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINI 2046
I +V G V + + +++ + +G A +
Sbjct: 287 NVILTKPEVSEGTEVTVKCEA---HPRAKVTLNGVPAQPLGPRAQLLLKAT--------- 334
Query: 2047 PNLIEGRQYEFRVYAQNE-AGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNAN--AIQNH 2103
GR + A E AG + + + +++ P + N +N
Sbjct: 335 -PEDNGRSFSCS--ATLEVAGQLIHKNQTRELRVLYG-----PRLDERDCPGNWTWPENS 386
Query: 2104 NAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAV 2163
C G P P + LK P +V Y+CRA
Sbjct: 387 QQTPMCQAWGNPLPELKCLKDGTFPLPI-------------GESVTVTRDLEGTYLCRAR 433
Query: 2164 NKGGVKSTKAELIIM 2178
+ G + + + ++
Sbjct: 434 STQGEVTREVTVNVL 448
Score = 86.5 bits (213), Expect = 2e-17
Identities = 60/494 (12%), Positives = 125/494 (25%), Gaps = 69/494 (13%)
Query: 190 PNALYIPEGDNTKVKIFYAGDQPM----EVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKE 245
P+ + +P G + V + DQPM E L K ++ ++R + + +
Sbjct: 6 PSKVILPRGGSVLVTCSTSCDQPMLLGIETPLPKKELLLPGNNRKVYELSN--------- 56
Query: 246 IRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPIGPLDVSEITKH-----TCTLHWNP 300
++ + G + + + P S C +
Sbjct: 57 --VQEDSQPMCYSNCPDGQSTAKTFLTVYWTPERVELAPLPSWQPVGKNLTLRCQVEGGA 114
Query: 301 PKYDGGLKVTHYVVERRDISMPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGM- 359
P+ + L V R + T V + F +
Sbjct: 115 PRAN--LTVVLL----RGEKELKREPAVGEPAEVTTTVLVRRDHHGANFSCRTELDLRPQ 168
Query: 360 -GPPLEGINPIKAKSPYDKPSPPGIPVVTQV--GGDFVNLSWDKPLDDGGSRIQGYWIDK 416
E + + P+ P V +V + S Q +
Sbjct: 169 GLELFENTSAPYQLQTFVLPATPPQLVSPRVLEVDTQGTVVCSLDGLFPVSEAQVHLALG 228
Query: 417 HEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPM 476
+ + N + A + +++ EG +V I
Sbjct: 229 DQRLNPTVTYGNDSFSAKASVSVTAEDEG-TQRLTCAVILGNQ---SQETLQTVTIYSF- 283
Query: 477 AAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTY 536
P V L + +C K T++ + G
Sbjct: 284 ----PAPNVILTKPEVSEGTEVTVKCEAHPRAKVTLNGVPAQP------------LGPRA 327
Query: 537 TLIINSVYGVDADEYVCRAVNKGG----VKSTKAELIIMTAPKFNVPPRFRDTAYFDKGE 592
L++ + + + C A + K+ EL ++ P+ + + + +
Sbjct: 328 QLLLKATPEDNGRSFSCSATLEVAGQLIHKNQTRELRVLYGPRLDERDCPGNWT-WPENS 386
Query: 593 NVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAPYRVVAE 652
G P P++ +D G T + Y A
Sbjct: 387 QQTPMCQAWGNPLPELKCLKDGTFPLPIGESVTVTRD-------------LEGTYLCRAR 433
Query: 653 NDLGMDSAIVKIQI 666
+ G + V + +
Sbjct: 434 STQGEVTREVTVNV 447
Score = 82.2 bits (202), Expect = 4e-16
Identities = 60/442 (13%), Positives = 109/442 (24%), Gaps = 78/442 (17%)
Query: 1477 NSASLVVKNSQRSDGGQYRLQLKNPAGFDTATLHSRLRTLPDSVNP-------------- 1522
+ V + S + Q P G TA + P+ V
Sbjct: 46 GNNRKVYELSNVQEDSQPMCYSNCPDGQSTAKTFLTVYWTPERVELAPLPSWQPVGKNLT 105
Query: 1523 -RCHLPSSTSKERPKFPTHPNHQPWLKWARASLTSKGVDSTEDSISLVWSKPRHDGGSPI 1581
RC + P L+ + V + + V + H G +
Sbjct: 106 LRCQVEGG-------APRANLTVVLLRGEKELKREPAVGEPAEVTTTVLVRRDHHGANFS 158
Query: 1582 QRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEGKSIGSERGSTAQF---------- 1631
R ++ R + + S + T + E +
Sbjct: 159 CRTELDLRPQGLELFENTSAPYQLQTFVLPATPPQLVSPRVLEVDTQGTVVCSLDGLFPV 218
Query: 1632 ----LEREVGGAIWLKCNDY--NVLECSFSVLNLVEGND-YEFRIIAVNAIGKSEPSICT 1684
+ +G Y + SV E + E
Sbjct: 219 SEAQVHLALGDQRLNPTVTYGNDSFSAKASVSVTAEDEGTQRLTCAVILGNQSQETLQ-- 276
Query: 1685 TPVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARY 1744
V I F P V L V G +T++CEA +
Sbjct: 277 -TVTIYSF-----PAPNVILTKPEVSEGTEVTVKCEAHPRAKVTLNGVPAQPLGPRA--- 327
Query: 1745 RVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVG----FAHTSSRVKIGTPPRIDR--MPN 1798
+L + + ++C A V + + +++ PR+D P
Sbjct: 328 ---------QLLLKATPEDNGRSFSCSATLEVAGQLIHKNQTRELRVLYGPRLDERDCPG 378
Query: 1799 ALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDA 1858
PE G+ E+ K+G + ++
Sbjct: 379 NWTWPENSQQTPMCQAWGNPLPELKCLKDGTFPLPIGE-------------SVTVTRDLE 425
Query: 1859 GDYTVNLSNSSGSVSGTFTINI 1880
G Y ++ G V+ T+N+
Sbjct: 426 GTYLCRARSTQGEVTREVTVNV 447
Score = 79.9 bits (196), Expect = 3e-15
Identities = 29/191 (15%), Positives = 55/191 (28%), Gaps = 31/191 (16%)
Query: 89 EKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRL 148
P V L V G +T++CEA + +L
Sbjct: 282 SFPAPNVILTKPEVSEGTEVTVKCEAHPRAKVTLNGVPAQPLGPRA------------QL 329
Query: 149 HFNEVTDVDNGDYTCEAYNSVG----FAHTSSRVKIGTPPRIDR--MPNALYIPEGDNTK 202
+ + ++C A V + + +++ PR+D P PE
Sbjct: 330 LLKATPEDNGRSFSCSATLEVAGQLIHKNQTRELRVLYGPRLDERDCPGNWTWPENSQQT 389
Query: 203 VKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSS 262
G+ E+ K+G + ++ G Y ++
Sbjct: 390 PMCQAWGNPLPELKCLKDGTFPLPIGE-------------SVTVTRDLEGTYLCRARSTQ 436
Query: 263 GSVSGTFTINI 273
G V+ T+N+
Sbjct: 437 GEVTREVTVNV 447
Score = 68.0 bits (165), Expect = 2e-11
Identities = 29/289 (10%), Positives = 74/289 (25%), Gaps = 26/289 (8%)
Query: 482 EIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIIN 541
+ V + + C+ + + TP + + G+ +
Sbjct: 1 QTSVSPSKVILPRGGSVLVTCSTSCDQPMLLGIE------TPLPKKELLLPGNNRKVYEL 54
Query: 542 SVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVK-IPF 600
S + + +C + G + K L + P+ ++ G+N+ ++
Sbjct: 55 SNVQ-EDSQPMCYSNCPDGQSTAKTFLTVYWTPER--VELAPLPSWQPVGKNLTLRCQVE 111
Query: 601 TGYPKP--KITWYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAPYRVVAENDLGMD 658
G P+ + R + ++ T+ + A + E DL
Sbjct: 112 GGAPRANLTVVLLRGEKELKRE---PAVGEPAEVTTTVLVRRDHHGANFSCRTELDLRPQ 168
Query: 659 --------SAIVKIQISDRPDPPQFPTVEDIGH--DSLALVWRAPIWDGGSNITNYIVEK 708
SA ++Q P P + +V S ++
Sbjct: 169 GLELFENTSAPYQLQTFVLPATPPQLVSPRVLEVDTQGTVVCSLDGLFPVSEAQVHLALG 228
Query: 709 REHPMSSWIRVGNTRFTTMAITGL-SPGHQYEFRVYAENVYGRSDPSTT 756
+ + ++ +++ + T
Sbjct: 229 DQRLNPTVTYGNDSFSAKASVSVTAEDEGTQRLTCAVILGNQSQETLQT 277
Score = 62.2 bits (150), Expect = 1e-09
Identities = 52/426 (12%), Positives = 110/426 (25%), Gaps = 55/426 (12%)
Query: 1797 PNALYIPEGDNTKVKIFYAGDQPM----EVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKE 1852
P+ + +P G + V + DQPM E L K ++ ++R + + +
Sbjct: 6 PSKVILPRGGSVLVTCSTSCDQPMLLGIETPLPKKELLLPGNNRKVYELSN--------- 56
Query: 1853 IRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPIGPLDVSEITKH-----TCTLHWNP 1907
++ + G + + + P S C +
Sbjct: 57 --VQEDSQPMCYSNCPDGQSTAKTFLTVYWTPERVELAPLPSWQPVGKNLTLRCQVEGGA 114
Query: 1908 PKYDGGLKVTHYVVERRDISMPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGM- 1966
P+ + L V R + T V + F +
Sbjct: 115 PRAN--LTVVLL----RGEKELKREPAVGEPAEVTTTVLVRRDHHGANFSCRTELDLRPQ 168
Query: 1967 -GPPLEGINPIKAKSPYDKPSPPGIPVVTQV--GGDFVNLSWDKPLDDGGSRIQGYWIDK 2023
E + + P+ P V +V + S Q +
Sbjct: 169 GLELFENTSAPYQLQTFVLPATPPQLVSPRVLEVDTQGTVVCSLDGLFPVSEAQVHLALG 228
Query: 2024 HEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPM 2083
+ + N + A + +++ EG +V I
Sbjct: 229 DQRLNPTVTYGNDSFSAKASVSVTAEDEG-TQRLTCAVILGNQ---SQETLQTVTIYSF- 283
Query: 2084 AAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTY 2143
P V L + +C K T++ + G
Sbjct: 284 ----PAPNVILTKPEVSEGTEVTVKCEAHPRAKVTLNGVPAQP------------LGPRA 327
Query: 2144 TLIINSVYGVDADEYVCRAVNKGG----VKSTKAELIIMTAPKFNVPPRFRDTAYFESDV 2199
L++ + + + C A + K+ EL ++ P+ + + + E+
Sbjct: 328 QLLLKATPEDNGRSFSCSATLEVAGQLIHKNQTRELRVLYGPRLDERDCPGNWTWPENSQ 387
Query: 2200 VVVVCV 2205
+C
Sbjct: 388 QTPMCQ 393
Score = 60.3 bits (145), Expect = 4e-09
Identities = 32/224 (14%), Positives = 58/224 (25%), Gaps = 23/224 (10%)
Query: 91 PDFIVPLKDLVVPLGKLLTLQCEATG---TPVPKCRWLRNGREISSGARYRVETAGGVFR 147
+ P+GK LTL+C+ G LR +E+ R
Sbjct: 87 ERVELAPLPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELK---REPAVGEPAEVT 143
Query: 148 LHFNEVTDVDNGDYTCEAYNSVG-----FAHTSSRVKIGT----PPRIDRMPNALYIPEG 198
D +++C + +S P ++ + +
Sbjct: 144 TTVLVRRDHHGANFSCRTELDLRPQGLELFENTSAPYQLQTFVLPATPPQLVSPRVLEVD 203
Query: 199 DNTKVKIFYAGDQP---MEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDY- 254
V G P +V L + + + D + + ED G
Sbjct: 204 TQGTVVCSLDGLFPVSEAQVHLALGDQRLNPTVTYGN---DSFSAKASVSVTAEDEGTQR 260
Query: 255 -TVNLSNSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLH 297
T + + S T+ I P P + T+
Sbjct: 261 LTCAVILGNQSQETLQTVTIYSFPAPNVILTKPEVSEGTEVTVK 304
Score = 59.1 bits (142), Expect = 9e-09
Identities = 43/408 (10%), Positives = 91/408 (22%), Gaps = 50/408 (12%)
Query: 1406 PGKQSGPVIVEEQPNKPVMDLSGVRDITVKAGEDFSI--HVPFMA-FPQPAAFWFANDSI 1462
P QS P G++ ++ V A +
Sbjct: 70 PDGQSTAKTFLTVYWTPERVELAPLPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKE 129
Query: 1463 IDDSDTRVHKQLTMNSASLVVKNSQRSDGGQYRLQLKNPAGFDTATLHSRLRTLPDSVNP 1522
+ + V + G + + + + L ++ +
Sbjct: 130 LKREPAV----GEPAEVTTTVLVRRDHHGANFSCRTELDLR-------PQGLELFENTSA 178
Query: 1523 RCHLPSSTSKERPKFPTHPNHQPWLKWARASLTSKGVDSTEDSISLVWSK--------PR 1574
L + P P + G+ + +
Sbjct: 179 PYQLQTFVLPATPPQLVSPRVLEVDTQGTVVCSLDGLFPV-SEAQVHLALGDQRLNPTVT 237
Query: 1575 HDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVL---------WVSEGKSIGSER 1625
+ S + V + + + S + +
Sbjct: 238 YGNDSFSAKASVSVTAEDEGTQRLTCAVILGNQSQETLQTVTIYSFPAPNVILTKPEVSE 297
Query: 1626 GSTAQFLEREVGGAI--WLKCNDYNVLECSFSVLNLVEGND-YEFRIIAVNAIGKSEPSI 1682
G+ A + + +L ++ F A + I
Sbjct: 298 GTEVTVKCEAHPRAKVTLNGVPAQPLGPRAQLLLKATPEDNGRSFSCSATLEVAGQ--LI 355
Query: 1683 CTTPVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGA 1742
+ + G + D + P T C+A G P+P+ + L++G
Sbjct: 356 HKNQTRELRVLYGPRLDERDCPGNWTWPENSQQTPMCQAWGNPLPELKCLKDGTFPLPIG 415
Query: 1743 RYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTP 1790
VT G Y C A ++ G V + +P
Sbjct: 416 ESVT-------------VTRDLEGTYLCRARSTQGEVTREVTVNVLSP 450
Score = 58.7 bits (141), Expect = 1e-08
Identities = 19/94 (20%), Positives = 31/94 (32%), Gaps = 13/94 (13%)
Query: 90 KPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLH 149
+ D + P T C+A G P+P+ + L++G
Sbjct: 370 RLDERDCPGNWTWPENSQQTPMCQAWGNPLPELKCLKDGTFPLPIGESVT---------- 419
Query: 150 FNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTP 183
VT G Y C A ++ G V + +P
Sbjct: 420 ---VTRDLEGTYLCRARSTQGEVTREVTVNVLSP 450
Score = 57.6 bits (138), Expect = 3e-08
Identities = 27/252 (10%), Positives = 65/252 (25%), Gaps = 19/252 (7%)
Query: 43 LECSFSVLNLVEGNDYEFRIIAVNAIGKSEPSICTTPVKICEFVGGEKPDFIV-PLKDLV 101
E + +VL + + F + + + P + V
Sbjct: 140 AEVTTTVLVRRDHHGANFSCRTELDLRPQGLELFENTSAPYQLQTFVLPATPPQLVSPRV 199
Query: 102 VPLGKLLTLQCEATG---TPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDN 158
+ + T+ C G + + ++ Y ++ + D
Sbjct: 200 LEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRLNPTVTYGNDSFSAKASVSVT-AEDEGT 258
Query: 159 GDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLT 218
TC T V I + P + + + EG VK + ++
Sbjct: 259 QRLTCAVILGNQSQETLQTVTIYSFPAPNVILTKPEVSEGTEVTVKCEAHPRAKVTLNGV 318
Query: 219 KNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSG--SVSGTFTINITGL 276
+ + +K +++ ++ + + + T + L
Sbjct: 319 PAQPLGPR------------AQLLLKATPEDNGRSFSCSATLEVAGQLIHKNQTRELRVL 366
Query: 277 PGPPIGPLDVSE 288
GP + D
Sbjct: 367 YGPRLDERDCPG 378
Score = 51.4 bits (122), Expect = 3e-06
Identities = 22/135 (16%), Positives = 39/135 (28%), Gaps = 18/135 (13%)
Query: 1094 RVTSLIENHEYEFRVCAVN-AAGQGPWSSSSDIIMCCAPPCAPKITSDLSIRDMTVLAGE 1152
+ + E++ F A AGQ + + + P ++ + T
Sbjct: 330 LLKATPEDNGRSFSCSATLEVAGQLIHKNQTRELRVLYGP---RLDERDCPGNWTWPENS 386
Query: 1153 EFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQTIYRNKSAKRATDSGSYTIQL 1212
+ T G P P +G P G T + G+Y +
Sbjct: 387 QQTPMCQAWGNPLPELKCLKDGTFPLPIGESVTVTRD--------------LEGTYLCRA 432
Query: 1213 VNTVGSDSASCKVYV 1227
+T G + V V
Sbjct: 433 RSTQGEVTREVTVNV 447
Score = 44.9 bits (105), Expect = 3e-04
Identities = 13/117 (11%), Positives = 33/117 (28%), Gaps = 8/117 (6%)
Query: 2089 EIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIIN 2148
+ V + + C+ + + TP + + G+ +
Sbjct: 1 QTSVSPSKVILPRGGSVLVTCSTSCDQPMLLGIE------TPLPKKELLLPGNNRKVYEL 54
Query: 2149 SVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPRFRDTAYFESDVVVVVCV 2205
S + + +C + G + K L + P+ V + + + C
Sbjct: 55 SNVQ-EDSQPMCYSNCPDGQSTAKTFLTVYWTPER-VELAPLPSWQPVGKNLTLRCQ 109
Score = 32.9 bits (74), Expect = 1.3
Identities = 22/178 (12%), Positives = 49/178 (27%), Gaps = 20/178 (11%)
Query: 1064 VLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVC----AVNAAGQGPW 1119
V+ + K + E + E+ + R ++H F C + G +
Sbjct: 121 VVLLRGEKELKREPAVG-EPAEVTTTVLVRR-----DHHGANFS-CRTELDLRPQGLELF 173
Query: 1120 SSSSDIIMCC--APPCAPKITSDLSIRDMTVLAGEEFTITVPFSG-RPKPTPIWTVNGDE 1176
++S P P + + + T+ G P + +
Sbjct: 174 ENTSAPYQLQTFVLPATPPQ----LVSPRVLEVDTQGTVVCSLDGLFPVSEAQVHLALGD 229
Query: 1177 VSPDGRIKFETSENQTIYRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYVVDKPSPP 1234
+ + + + + A D G+ + +G+ S V P
Sbjct: 230 QRLNPTVT--YGNDSFSAKASVSVTAEDEGTQRLTCAVILGNQSQETLQTVTIYSFPA 285
>1wwc_A Protein (NT-3 growth factor receptor TRKC); TRK receptor, receptor
tyrosine kinase, 3D-domain swapping, transferase; 1.90A
{Homo sapiens} SCOP: b.1.1.4
Length = 118
Score = 80.6 bits (199), Expect = 7e-18
Identities = 16/105 (15%), Positives = 29/105 (27%), Gaps = 7/105 (6%)
Query: 480 APEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDT---- 535
P ++ + + G P PT+ WL + + S H+ +
Sbjct: 8 PPRVVSLE---EPELRLEHCIEFVVRGNPPPTLHWLHNGQPLRESKIIHVEYYQEGEISE 64
Query: 536 YTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPP 580
L+ N + Y A N G + + P
Sbjct: 65 GCLLFNKPTHYNNGNYTLIAKNPLGTANQTINGHFLKEPFPVDEV 109
Score = 80.6 bits (199), Expect = 7e-18
Identities = 16/105 (15%), Positives = 29/105 (27%), Gaps = 7/105 (6%)
Query: 2087 APEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDT---- 2142
P ++ + + G P PT+ WL + + S H+ +
Sbjct: 8 PPRVVSLE---EPELRLEHCIEFVVRGNPPPTLHWLHNGQPLRESKIIHVEYYQEGEISE 64
Query: 2143 YTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPP 2187
L+ N + Y A N G + + P
Sbjct: 65 GCLLFNKPTHYNNGNYTLIAKNPLGTANQTINGHFLKEPFPVDEV 109
Score = 80.2 bits (198), Expect = 9e-18
Identities = 18/104 (17%), Positives = 34/104 (32%), Gaps = 4/104 (3%)
Query: 577 NVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSE----RHA 632
PPR + ++ G P P + W + + + HVE +
Sbjct: 6 YYPPRVVSLEEPELRLEHCIEFVVRGNPPPTLHWLHNGQPLRESKIIHVEYYQEGEISEG 65
Query: 633 ILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQISDRPDPPQFP 676
L ++ + Y ++A+N LG + + P P
Sbjct: 66 CLLFNKPTHYNNGNYTLIAKNPLGTANQTINGHFLKEPFPVDEV 109
Score = 77.5 bits (191), Expect = 7e-17
Identities = 25/105 (23%), Positives = 40/105 (38%), Gaps = 6/105 (5%)
Query: 91 PDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFR--- 147
P +V L++ + ++ G P P WL NG+ + VE
Sbjct: 8 PPRVVSLEEPEL--RLEHCIEFVVRGNPPPTLHWLHNGQPLRESKIIHVEYYQEGEISEG 65
Query: 148 -LHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMPN 191
L FN+ T +NG+YT A N +G A+ + P +
Sbjct: 66 CLLFNKPTHYNNGNYTLIAKNPLGTANQTINGHFLKEPFPVDEVS 110
Score = 77.5 bits (191), Expect = 7e-17
Identities = 25/105 (23%), Positives = 40/105 (38%), Gaps = 6/105 (5%)
Query: 1698 PDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFR--- 1754
P +V L++ + ++ G P P WL NG+ + VE
Sbjct: 8 PPRVVSLEEPEL--RLEHCIEFVVRGNPPPTLHWLHNGQPLRESKIIHVEYYQEGEISEG 65
Query: 1755 -LHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMPN 1798
L FN+ T +NG+YT A N +G A+ + P +
Sbjct: 66 CLLFNKPTHYNNGNYTLIAKNPLGTANQTINGHFLKEPFPVDEVS 110
Score = 69.8 bits (171), Expect = 3e-14
Identities = 24/117 (20%), Positives = 41/117 (35%), Gaps = 15/117 (12%)
Query: 1134 APKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQTI 1193
P++ S E I G P PT W NG + I E + I
Sbjct: 8 PPRVVSLEE-----PELRLEHCIEFVVRGNPPPTLHWLHNGQPLRESKIIHVEYYQEGEI 62
Query: 1194 YRN----KSAKRATDSGSYTIQLVNTVGSDSASCKVYVVDKPSP-----PQGPLDVS 1241
++G+YT+ N +G+ + + + + +P P P P+ V+
Sbjct: 63 SEGCLLFNKPTHY-NNGNYTLIAKNPLGTANQTINGHFLKEPFPVDEVSPTPPITVT 118
Score = 61.4 bits (149), Expect = 3e-11
Identities = 19/120 (15%), Positives = 40/120 (33%), Gaps = 12/120 (10%)
Query: 177 RVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLD 236
+ + PPR+ + ++ G+ P + NG+ ++
Sbjct: 2 ALTVYYPPRVVSLEEPE---LRLEHCIEFVVRGNPPPTLHWLHNGQPLRESKIIHVEYYQ 58
Query: 237 DYIIIF----IKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGP-----PIGPLDVS 287
+ I + + G+YT+ N G+ + T + P P P P+ V+
Sbjct: 59 EGEISEGCLLFNKPTHYNNGNYTLIAKNPLGTANQTINGHFLKEPFPVDEVSPTPPITVT 118
Score = 61.4 bits (149), Expect = 3e-11
Identities = 19/120 (15%), Positives = 40/120 (33%), Gaps = 12/120 (10%)
Query: 1784 RVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLD 1843
+ + PPR+ + ++ G+ P + NG+ ++
Sbjct: 2 ALTVYYPPRVVSLEEPE---LRLEHCIEFVVRGNPPPTLHWLHNGQPLRESKIIHVEYYQ 58
Query: 1844 DYIIIF----IKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGP-----PIGPLDVS 1894
+ I + + G+YT+ N G+ + T + P P P P+ V+
Sbjct: 59 EGEISEGCLLFNKPTHYNNGNYTLIAKNPLGTANQTINGHFLKEPFPVDEVSPTPPITVT 118
Score = 52.1 bits (125), Expect = 7e-08
Identities = 17/89 (19%), Positives = 30/89 (33%), Gaps = 3/89 (3%)
Query: 1437 GEDFSIHVPFMAFPQPAAFWFANDSIIDDSD---TRVHKQLTMNSASLVVKNSQRSDGGQ 1493
+ I P P W N + +S +++ ++ L+ + G
Sbjct: 20 RLEHCIEFVVRGNPPPTLHWLHNGQPLRESKIIHVEYYQEGEISEGCLLFNKPTHYNNGN 79
Query: 1494 YRLQLKNPAGFDTATLHSRLRTLPDSVNP 1522
Y L KNP G T++ P V+
Sbjct: 80 YTLIAKNPLGTANQTINGHFLKEPFPVDE 108
>2ed8_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal
cancer suppressor, structural genomics, NPPSFA; NMR
{Homo sapiens}
Length = 106
Score = 80.0 bits (198), Expect = 8e-18
Identities = 24/109 (22%), Positives = 39/109 (35%), Gaps = 7/109 (6%)
Query: 274 TGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHD 333
+ PGP L + + + W PP Y G V Y + ++S I
Sbjct: 5 SSGPGPVEN-LQAVSTSPTSILITWEPPAYANG-PVQGYRLFCTEVSTGKEQNIEVD--G 60
Query: 334 TTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPG 382
++ ++GL + EY +A N G G + I + D G
Sbjct: 61 LSYKLEGLKKFTEYSLRFLAYNRYGPGVSTD---DITVVTLSDSGPSSG 106
Score = 80.0 bits (198), Expect = 8e-18
Identities = 24/109 (22%), Positives = 39/109 (35%), Gaps = 7/109 (6%)
Query: 1881 TGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHD 1940
+ PGP L + + + W PP Y G V Y + ++S I
Sbjct: 5 SSGPGPVEN-LQAVSTSPTSILITWEPPAYANG-PVQGYRLFCTEVSTGKEQNIEVD--G 60
Query: 1941 TTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPG 1989
++ ++GL + EY +A N G G + I + D G
Sbjct: 61 LSYKLEGLKKFTEYSLRFLAYNRYGPGVSTD---DITVVTLSDSGPSSG 106
Score = 76.5 bits (189), Expect = 1e-16
Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 4/86 (4%)
Query: 1231 PSPPQGPLDVSDITPESCSLSWKPPLDDGGSPITNYVVEKYESATGFWSKLSSFVRSPAY 1290
P P + L +P S ++W+PP G P+ Y + E +TG + V +Y
Sbjct: 8 PGPVEN-LQAVSTSPTSILITWEPPAYANG-PVQGYRLFCTEVSTGKEQNIE--VDGLSY 63
Query: 1291 DVFGLETNRQYRFRVRAENQYGVSEP 1316
+ GL+ +Y R A N+YG
Sbjct: 64 KLEGLKKFTEYSLRFLAYNRYGPGVS 89
Score = 74.2 bits (183), Expect = 7e-16
Identities = 18/95 (18%), Positives = 31/95 (32%), Gaps = 2/95 (2%)
Query: 670 PDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSWIRVGNTRFTTMAI 729
P P + S+ + W P + G + Y + E + + +
Sbjct: 8 PGPVENLQAVSTSPTSILITWEPPAYANG-PVQGYRLFCTEVSTGKEQNIEVDG-LSYKL 65
Query: 730 TGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKD 764
GL +Y R A N YG + ++T D
Sbjct: 66 EGLKKFTEYSLRFLAYNRYGPGVSTDDITVVTLSD 100
Score = 69.2 bits (170), Expect = 4e-14
Identities = 21/103 (20%), Positives = 35/103 (33%), Gaps = 4/103 (3%)
Query: 373 SPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAIC 432
S P P + ++W+ P G +QGY + EV + Q + V
Sbjct: 3 SGSSGPGPVENLQAVSTSPTSILITWEPPAYANG-PVQGYRLFCTEVSTGKEQNIEVD-- 59
Query: 433 APSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDP 475
+ L + +Y R A N G + + V + D
Sbjct: 60 -GLSYKLEGLKKFTEYSLRFLAYNRYGPGVSTDDITVVTLSDS 101
Score = 69.2 bits (170), Expect = 4e-14
Identities = 21/103 (20%), Positives = 35/103 (33%), Gaps = 4/103 (3%)
Query: 1980 SPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAIC 2039
S P P + ++W+ P G +QGY + EV + Q + V
Sbjct: 3 SGSSGPGPVENLQAVSTSPTSILITWEPPAYANG-PVQGYRLFCTEVSTGKEQNIEVD-- 59
Query: 2040 APSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDP 2082
+ L + +Y R A N G + + V + D
Sbjct: 60 -GLSYKLEGLKKFTEYSLRFLAYNRYGPGVSTDDITVVTLSDS 101
Score = 68.8 bits (169), Expect = 5e-14
Identities = 24/105 (22%), Positives = 39/105 (37%), Gaps = 6/105 (5%)
Query: 902 PHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTKVSSYVTTPFVR 961
P P ENL A + S+ + W PP G + Y + + ++ + V +
Sbjct: 8 PGPVENLQAVSTSPTSILITWEPPAYANG-PVQGYRLFCTEVSTGKEQNIE--VDGLSYK 64
Query: 962 VRNLAIGSTYEFRVMAENQYGLSKPALTIDPIKAKHPFDVPGAPG 1006
+ L + Y R +A N+YG D I D + G
Sbjct: 65 LEGLKKFTEYSLRFLAYNRYGPGVST---DDITVVTLSDSGPSSG 106
Score = 66.5 bits (163), Expect = 4e-13
Identities = 25/126 (19%), Positives = 36/126 (28%), Gaps = 36/126 (28%)
Query: 1000 DVPGAPGAPKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDT 1059
PG + V ++ SI + W P + G P+Q Y + +S K I
Sbjct: 6 SGPGPVENLQAVSTSPTSILITWEPPAYANG-PVQGYRLFCTEVSTGKEQN-----IEVD 59
Query: 1060 SLKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPW 1119
L Y L L + EY R A N G G
Sbjct: 60 GLSYKL------------------------------EGLKKFTEYSLRFLAYNRYGPGVS 89
Query: 1120 SSSSDI 1125
+ +
Sbjct: 90 TDDITV 95
Score = 45.7 bits (109), Expect = 8e-06
Identities = 20/133 (15%), Positives = 35/133 (26%), Gaps = 52/133 (39%)
Query: 1557 KGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVS 1616
+ V ++ SI + W P + G P+Q Y + +S K
Sbjct: 15 QAVSTSPTSILITWEPPAYANG-PVQGYRLFCTEVSTGKEQN------------------ 55
Query: 1617 EGKSIGSERGSTAQFLEREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIG 1676
V S+ + L + +Y R +A N G
Sbjct: 56 ------------------------------IEVDGLSYKLEGLKKFTEYSLRFLAYNRYG 85
Query: 1677 ---KSEPSICTTP 1686
++ T
Sbjct: 86 PGVSTDDITVVTL 98
Score = 41.9 bits (99), Expect = 2e-04
Identities = 12/61 (19%), Positives = 20/61 (32%), Gaps = 6/61 (9%)
Query: 22 YIIERREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIG---KSEPSICTT 78
Y + EV V S+ + L + +Y R +A N G ++ T
Sbjct: 41 YRLFCTEVSTGKEQN---IEVDGLSYKLEGLKKFTEYSLRFLAYNRYGPGVSTDDITVVT 97
Query: 79 P 79
Sbjct: 98 L 98
Score = 36.5 bits (85), Expect = 0.014
Identities = 13/63 (20%), Positives = 22/63 (34%), Gaps = 5/63 (7%)
Query: 1330 TVPDPPGQPQIVDWDTNNATLMWDRPRTDGGSKIQGYKMLLKTPTGELPTTIWSKIRPTS 1389
+ P P Q V + + W+ P G +QGY++ E+ T I
Sbjct: 6 SGPGPVENLQAVSTSPTSILITWEPPAYANG-PVQGYRLFCT----EVSTGKEQNIEVDG 60
Query: 1390 STV 1392
+
Sbjct: 61 LSY 63
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation,
transferase-transferas inhibitor complex; HET: SEP BX7;
1.80A {Homo sapiens}
Length = 319
Score = 86.0 bits (213), Expect = 9e-18
Identities = 23/85 (27%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
Query: 816 SSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEK-ELIRKEIDIMNQL 874
S+ + + + +G GA V R R +KTG++FA K L ++ +E +++ +L
Sbjct: 5 STSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKL 64
Query: 875 HHPKLINLHDAFEDD--DEMVLIFE 897
+H ++ L E+ VLI E
Sbjct: 65 NHKNIVKLFAIEEETTTRHKVLIME 89
>3se4_A Interferon alpha/beta receptor 1; type I interferon signaling
complex, extracellular space, IM system receptor; HET:
NAG; 3.50A {Homo sapiens} PDB: 3se3_A*
Length = 414
Score = 87.4 bits (215), Expect = 1e-17
Identities = 50/422 (11%), Positives = 107/422 (25%), Gaps = 53/422 (12%)
Query: 904 PPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTKVSSYVTTP----F 959
P+ + D D+ L W ++ G+ + + + W K+S
Sbjct: 10 SPQKVEVDIID-DNFILRWNRSDESVGN--VTFSFDYQKTGMDNWIKLSGCQNITSTKCN 66
Query: 960 VRVRNLAIGSTYEFRVMAENQYGLSKPALTIDPIKAKHPFDVPGAPGAPKGVDSTEDSIS 1019
L + + R+ AE S + P P +++ + +I
Sbjct: 67 FSSLKLNVYEEIKLRIRAEK-ENTSSWYEVDSFTPFRKAQIGP--PEVH--LEAEDKAIV 121
Query: 1020 LVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEGKSIGSERGS 1079
+ S D + + K I + ++ ++
Sbjct: 122 IHISPGTKDSVMWALDGLSFTYSLVIWKNSSGVEERIENIYSRHKIY------------- 168
Query: 1080 TAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPWSSSSDIIMCC---APPCAPK 1136
L Y +V A S + P+
Sbjct: 169 -----------------KLSPETTYCLKVKAALLTSWKIGVYSPVHCIKTTVENELPPPE 211
Query: 1137 ITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQTIYRN 1196
VL + + F + + G+ + +I EN +
Sbjct: 212 NIEVSVQNQNYVLKWDYTYANMTFQVQWLHAFLKRNPGNHLYKWKQI--PDCENVKTTQC 269
Query: 1197 KSAKRATDSGSYTIQLVNTVG---SDSASCKVYVVDKPSPPQGPLDVSDITPESCSLSWK 1253
+ G Y +++ + G S + + + + P+ +S +
Sbjct: 270 VFPQNVFQKGIYLLRVQASDGNNTSFWSEEIKFDTEIQAFLLPPVFNIRSLSDSFHIYIG 329
Query: 1254 PPLDDGGSPITNYVVEKYESA---TGFWSKLSSFVRSPAYDVFGLETNRQYRFRVRAENQ 1310
P G +P+ YE ++ + V L+ Y + RA
Sbjct: 330 APKQSGNTPVIQDYPLIYEIIFWENTSNAERKIIEKKTDVTVPNLKPLTVYCVKARAHTM 389
Query: 1311 YG 1312
Sbjct: 390 DE 391
Score = 70.4 bits (171), Expect = 2e-12
Identities = 39/226 (17%), Positives = 66/226 (29%), Gaps = 19/226 (8%)
Query: 260 NSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTH---YVVER 316
G S I T P + L W+ + +V ++
Sbjct: 188 WKIGVYSPVHCIKTTVENELPPPENIEVSVQNQNYVLKWDYTYANMTFQVQWLHAFLKRN 247
Query: 317 RDISMPHWICISTTCHDTT---FIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKS 373
+ W I + T Q + + YL V A + N E I
Sbjct: 248 PGNHLYKWKQIPDCENVKTTQCVFPQNVFQKGIYLLRVQASDGNNTSFWSEEIKFDTEIQ 307
Query: 374 PYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQ-----GYWIDKHEVGSDAWQRVN 428
PP + + D ++ P G + + Y I E S+A +++
Sbjct: 308 A--FLLPPVFNI--RSLSDSFHIYIGAPKQSGNTPVIQDYPLIYEIIFWENTSNAERKII 363
Query: 429 VAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSA-SNSVQIK 473
+ + +PNL Y + A SS S++V K
Sbjct: 364 E---KKTDVTVPNLKPLTVYCVKARAHTMDEKLNKSSVFSDAVCEK 406
Score = 70.4 bits (171), Expect = 2e-12
Identities = 39/226 (17%), Positives = 66/226 (29%), Gaps = 19/226 (8%)
Query: 1867 NSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTH---YVVER 1923
G S I T P + L W+ + +V ++
Sbjct: 188 WKIGVYSPVHCIKTTVENELPPPENIEVSVQNQNYVLKWDYTYANMTFQVQWLHAFLKRN 247
Query: 1924 RDISMPHWICISTTCHDTT---FIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKS 1980
+ W I + T Q + + YL V A + N E I
Sbjct: 248 PGNHLYKWKQIPDCENVKTTQCVFPQNVFQKGIYLLRVQASDGNNTSFWSEEIKFDTEIQ 307
Query: 1981 PYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQ-----GYWIDKHEVGSDAWQRVN 2035
PP + + D ++ P G + + Y I E S+A +++
Sbjct: 308 A--FLLPPVFNI--RSLSDSFHIYIGAPKQSGNTPVIQDYPLIYEIIFWENTSNAERKII 363
Query: 2036 VAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSA-SNSVQIK 2080
+ + +PNL Y + A SS S++V K
Sbjct: 364 EK---KTDVTVPNLKPLTVYCVKARAHTMDEKLNKSSVFSDAVCEK 406
Score = 67.3 bits (163), Expect = 2e-11
Identities = 46/395 (11%), Positives = 104/395 (26%), Gaps = 33/395 (8%)
Query: 396 LSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQ---INIPNLIEGRQYEFRV 452
L W++ + G+ + D + G D W +++ S + L + + R+
Sbjct: 25 LRWNRSDESVGNVT--FSFDYQKTGMDNWIKLSGCQNITSTKCNFSSLKLNVYEEIKLRI 82
Query: 453 YAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGC-PKPT 511
A+ E S +S PE+ + + + + + + ++ +
Sbjct: 83 RAEKE-NTSSWYE-VDSFTPFRKAQIGPPEVHLEAEDKAIVIHISPGTKDSVMWALDGLS 140
Query: 512 ISWLKGSREITPSARHHIFAEGDTYT---LIINSVYGVDADEYVCRAVNKGGVKSTKAEL 568
++ + + I + L + Y + + + G
Sbjct: 141 FTYSLVIWKNSSGVEERIENIYSRHKIYKLSPETTYCLKVKAALLTSWKIGVYSPVHCIK 200
Query: 569 IIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETS 628
+ PP V+ ++ W G H +
Sbjct: 201 TTVENEL---PPPENIEVSVQNQNYVLKWDYTYANMTFQVQWLHAFLKRNPGNHLYKWKQ 257
Query: 629 ERHAILTIRDASNV-----DTAPY--RVVAENDLGM-DSAIVKIQISDRPDPPQFPTVED 680
Y RV A + + ++ P
Sbjct: 258 IPDCENVKTTQCVFPQNVFQKGIYLLRVQASDGNNTSFWSEEIKFDTEIQAFLLPPVFNI 317
Query: 681 IGH-DSLALVWRAPIWDGGSNITN-----YIVEKREHPMSSWIRVGNTRFTTMAITGLSP 734
DS + AP G + + Y + E+ ++ ++ + T + + L P
Sbjct: 318 RSLSDSFHIYIGAPKQSGNTPVIQDYPLIYEIIFWENTSNAERKIIEKK-TDVTVPNLKP 376
Query: 735 GHQYEFRVYAENVYGR----SDPSTTSDLITTKDT 765
Y + A + + S S T
Sbjct: 377 LTVYCVKARAHTMDEKLNKSSVFSDAVCEKTKPGN 411
Score = 67.0 bits (162), Expect = 3e-11
Identities = 63/444 (14%), Positives = 122/444 (27%), Gaps = 79/444 (17%)
Query: 1011 VDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKAS-MAHIPDTSLKYVLWVSE 1069
VD +D+ L W++ G+ + + + D WIK S +I T
Sbjct: 16 VDIIDDNFILRWNRSDESVGN--VTFSFDYQKTGMDNWIKLSGCQNITSTK--------- 64
Query: 1070 GKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPWSSSSDIIMCC 1129
L E + R+ A + S
Sbjct: 65 ---------------------CNFSSLKLNVYEEIKLRIRAEKENTSSWYEVDSFTPFRK 103
Query: 1130 APPCAPKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSE 1189
A P++ L E+ I + S K + +W ++G + I ++ S
Sbjct: 104 AQIGPPEVH----------LEAEDKAIVIHISPGTKDSVMWALDGLSFTYSLVI-WKNSS 152
Query: 1190 NQTIYRNKSAKRATDSG-----SYTIQLV------NTVGSDSASCKVYVVDKPSPPQGPL 1238
R +Y +++ +G S + + P
Sbjct: 153 GVEERIENIYSRHKIYKLSPETTYCLKVKAALLTSWKIGVYSPVHCIKTTVENELPPPEN 212
Query: 1239 DVSDITPESCSLSWKPPLDDGGSPIT---NYVVEKYESATGFWSKLSSFVRSPAYDVF-- 1293
+ ++ L W + + ++ + W ++
Sbjct: 213 IEVSVQNQNYVLKWDYTYANMTFQVQWLHAFLKRNPGNHLYKWKQIPDCENVKTTQCVFP 272
Query: 1294 -GLETNRQYRFRVRAENQYGVSEPLELDNSITAKFPFTVPDPPGQPQIVDWDTNNATLMW 1352
+ Y RV+A + S E T PP +++ +
Sbjct: 273 QNVFQKGIYLLRVQASDGNNTSFWSEEIKFDTEI--QAFLLPPVFNIRS--LSDSFHIYI 328
Query: 1353 DRPRTDG-GSKIQGYKMLLKTPTGELPTTIWSKIRPTSS----------TVYC---KDTT 1398
P+ G IQ Y ++ + E + KI + TVYC + T
Sbjct: 329 GAPKQSGNTPVIQDYPLIYEIIFWENTSNAERKIIEKKTDVTVPNLKPLTVYCVKARAHT 388
Query: 1399 MNSSNSEPGKQSGPVIVEEQPNKP 1422
M+ ++ S V + +P
Sbjct: 389 MDEKLNKSSVFSDAVCEKTKPGNT 412
Score = 64.6 bits (156), Expect = 1e-10
Identities = 31/204 (15%), Positives = 51/204 (25%), Gaps = 10/204 (4%)
Query: 283 PLDVS-EITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWI----CISTTCHDTTFI 337
P V +I L WN G + + + M +WI C + T F
Sbjct: 11 PQKVEVDIIDDNFILRWNRSDESVGN--VTFSFDYQKTGMDNWIKLSGCQNITSTKCNFS 68
Query: 338 VQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLS 397
L +E + A EN K+ P + +
Sbjct: 69 SLKLNVYEEIKLRIRAEKENTSSWYEVDSFTPFRKAQIGPPEVHLEAEDKAIVIHISPGT 128
Query: 398 WDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNE 457
D + Y + + S +R+ S+ I L Y +V A
Sbjct: 129 KDSVMWALDGLSFTYSLVIWKNSSGVEERIEN---IYSRHKIYKLSPETTYCLKVKAALL 185
Query: 458 AGLSLPSSASNSVQIKDPMAAKAP 481
+ + P
Sbjct: 186 TSWKIGVYSPVHCIKTTVENELPP 209
Score = 64.6 bits (156), Expect = 1e-10
Identities = 31/204 (15%), Positives = 51/204 (25%), Gaps = 10/204 (4%)
Query: 1890 PLDVS-EITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWI----CISTTCHDTTFI 1944
P V +I L WN G + + + M +WI C + T F
Sbjct: 11 PQKVEVDIIDDNFILRWNRSDESVGN--VTFSFDYQKTGMDNWIKLSGCQNITSTKCNFS 68
Query: 1945 VQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLS 2004
L +E + A EN K+ P + +
Sbjct: 69 SLKLNVYEEIKLRIRAEKENTSSWYEVDSFTPFRKAQIGPPEVHLEAEDKAIVIHISPGT 128
Query: 2005 WDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNE 2064
D + Y + + S +R+ S+ I L Y +V A
Sbjct: 129 KDSVMWALDGLSFTYSLVIWKNSSGVEERIEN---IYSRHKIYKLSPETTYCLKVKAALL 185
Query: 2065 AGLSLPSSASNSVQIKDPMAAKAP 2088
+ + P
Sbjct: 186 TSWKIGVYSPVHCIKTTVENELPP 209
Score = 61.9 bits (149), Expect = 1e-09
Identities = 31/212 (14%), Positives = 59/212 (27%), Gaps = 10/212 (4%)
Query: 261 SSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHW--NPPKYDGGLKVTHYVVERRD 318
SS +FT GPP L+ + + + Y +
Sbjct: 90 SSWYEVDSFTPFRKAQIGPPEVHLEAEDKAIVIHISPGTKDSVMWALDGLSFTYSLVIWK 149
Query: 319 ISMPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKP 378
S I + + L+ Y V A + + ++
Sbjct: 150 NSSGVEERIENIY--SRHKIYKLSPETTYCLKVKAALLTSWKIGVYSPVHCIKTTVENEL 207
Query: 379 SPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQ---GYWIDKHEVGSDAWQRVNVA--ICA 433
PP V+ ++V L WD + ++Q + W+++ +
Sbjct: 208 PPPENIEVSVQNQNYV-LKWDYTYANMTFQVQWLHAFLKRNPGNHLYKWKQIPDCENVKT 266
Query: 434 PSQINIPNLIEGRQYEFRVYAQNEAGLSLPSS 465
+ N+ + Y RV A + S S
Sbjct: 267 TQCVFPQNVFQKGIYLLRVQASDGNNTSFWSE 298
Score = 61.9 bits (149), Expect = 1e-09
Identities = 31/212 (14%), Positives = 59/212 (27%), Gaps = 10/212 (4%)
Query: 1868 SSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHW--NPPKYDGGLKVTHYVVERRD 1925
SS +FT GPP L+ + + + Y +
Sbjct: 90 SSWYEVDSFTPFRKAQIGPPEVHLEAEDKAIVIHISPGTKDSVMWALDGLSFTYSLVIWK 149
Query: 1926 ISMPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKP 1985
S I + + L+ Y V A + + ++
Sbjct: 150 NSSGVEERIENIY--SRHKIYKLSPETTYCLKVKAALLTSWKIGVYSPVHCIKTTVENEL 207
Query: 1986 SPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQ---GYWIDKHEVGSDAWQRVNVA--ICA 2040
PP V+ ++V L WD + ++Q + W+++ +
Sbjct: 208 PPPENIEVSVQNQNYV-LKWDYTYANMTFQVQWLHAFLKRNPGNHLYKWKQIPDCENVKT 266
Query: 2041 PSQINIPNLIEGRQYEFRVYAQNEAGLSLPSS 2072
+ N+ + Y RV A + S S
Sbjct: 267 TQCVFPQNVFQKGIYLLRVQASDGNNTSFWSE 298
Score = 56.6 bits (135), Expect = 6e-08
Identities = 29/230 (12%), Positives = 55/230 (23%), Gaps = 44/230 (19%)
Query: 902 PHPPENLHADEFAGDSLTLYWTPPRDNGGSEIT---NYVVEKKDYNSTVWTKV---SSYV 955
PP + L W N ++ ++ + W ++ +
Sbjct: 206 ELPPPENIEVSVQNQNYVLKWDYTYANMTFQVQWLHAFLKRNPGNHLYKWKQIPDCENVK 265
Query: 956 TTPFVRVRNLAIGSTYEFRVMAENQYGLSKPALTIDPIKAKHPFDVPGAPGAPKGVDSTE 1015
TT V +N+ Y RV A + S + I P + S
Sbjct: 266 TTQCVFPQNVFQKGIYLLRVQASDGNNTSFWSEEIKFDTEIQA--FLLPPVFN--IRSLS 321
Query: 1016 DSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEGKSIGS 1075
DS + P+ G +P+ + I + + I + +
Sbjct: 322 DSFHIYIGAPKQSGNTPVIQDYPLIYEIIFWENTSNAERKIIEKKTDVTV---------- 371
Query: 1076 ERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAG----QGPWSS 1121
+L Y + A +S
Sbjct: 372 --------------------PNLKPLTVYCVKARAHTMDEKLNKSSVFSD 401
Score = 55.4 bits (132), Expect = 1e-07
Identities = 37/273 (13%), Positives = 71/273 (26%), Gaps = 44/273 (16%)
Query: 902 PHPPE-NLHADEFAGDSLTLYWTPPRDNGGSEITN-----YVVEKKDYNSTVWTKVSSYV 955
PPE +L A++ ++ ++ +P + + Y + +S V ++
Sbjct: 106 IGPPEVHLEAED---KAIVIHISPGTKDSVMWALDGLSFTYSLVIWKNSSGVEERIE--N 160
Query: 956 TTPFVRVRNLAIGSTYEFRVMAENQYGLSKPALTIDPIKAKHPFDVPGAPGAPKGVDSTE 1015
++ L+ +TY +V A K + K + P V
Sbjct: 161 IYSRHKIYKLSPETTYCLKVKAAL-LTSWKIGVYSPVHCIKTTVENELPPPENIEVSVQN 219
Query: 1016 DSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEGKSIGS 1075
+ L W + +Q + + K IPD
Sbjct: 220 QNYVLKWDYTYANMTFQVQWLHAFLKRNPGNHLYK--WKQIPDCENVKTTQC-------- 269
Query: 1076 ERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPWSSSSDIIMCCAPPCAP 1135
++ + Y RV A + WS P
Sbjct: 270 -----------------VFPQNVFQKGIYLLRVQASDGNNTSFWSEEIKFDTEIQAFLLP 312
Query: 1136 KITSDLSIRDMTVLAGEEFTITVPFSGRPKPTP 1168
+ + S+ D + I P P
Sbjct: 313 PVFNIRSLSDSFHI-----YIGAPKQSGNTPVI 340
Score = 49.6 bits (117), Expect = 8e-06
Identities = 46/374 (12%), Positives = 96/374 (25%), Gaps = 50/374 (13%)
Query: 22 YIIERREVGGAIWLK---CNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPSICTT 78
+ + ++ G W+K C + +C+FS L L + + RI A S +
Sbjct: 39 FSFDYQKTGMDNWIKLSGCQNITSTKCNFSSLKLNVYEEIKLRIRAEKE-NTSSWYEVDS 97
Query: 79 PVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYR 138
+ I P + + K + + + W +G +
Sbjct: 98 FTPFRKAQ-------IGPPEVHLEAEDKAIVIHI--SPGTKDSVMWALDGLSFTYSLVIW 148
Query: 139 VETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMPNALYIPEG 198
++G R+ Y A + KIG + + +
Sbjct: 149 KNSSGVEERIENIYSRHKIYKLSPETTYCLKVKAALLTSWKIGVYSPVHCIKTTVENELP 208
Query: 199 ----------------------DNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLD 236
N ++ + + Q D
Sbjct: 209 PPENIEVSVQNQNYVLKWDYTYANMTFQVQWLHAFLKRNPGNHLYKWKQIPDCENVK--- 265
Query: 237 DYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLP--GPPIGPLDVS-EITKHT 293
+F + + ++ G Y + + S G+ + ++ I + P + +
Sbjct: 266 TTQCVFPQNVFQK--GIYLLRVQASDGNNTSFWSEEIKFDTEIQAFLLPPVFNIRSLSDS 323
Query: 294 CTLHWNPPKYDGGLKVT-----HYVVERRDISMPHWICISTTCHDTTFIVQGLTEGQEYL 348
++ PK G V Y + + + I T V L Y
Sbjct: 324 FHIYIGAPKQSGNTPVIQDYPLIYEIIFWENTSNAERKIIEK--KTDVTVPNLKPLTVYC 381
Query: 349 FHVMAVNENGMGPP 362
A +
Sbjct: 382 VKARAHTMDEKLNK 395
Score = 45.8 bits (107), Expect = 1e-04
Identities = 54/441 (12%), Positives = 107/441 (24%), Gaps = 91/441 (20%)
Query: 1559 VDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEG 1618
VD +D+ L W++ G+ + + + D WIK S
Sbjct: 16 VDIIDDNFILRWNRSDESVGN--VTFSFDYQKTGMDNWIKLS------------------ 55
Query: 1619 KSIGSERGSTAQFLEREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKS 1678
C + +C+FS L L + + RI A S
Sbjct: 56 ------------------------GCQNITSTKCNFSSLKLNVYEEIKLRIRAEKE-NTS 90
Query: 1679 EPSICTTPVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREI 1738
+ + I P + + K + + + W +G
Sbjct: 91 SWYEVDSFTPFRKAQ-------IGPPEVHLEAEDKAIVIHI--SPGTKDSVMWALDGLSF 141
Query: 1739 SSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMPN 1798
+ ++G R+ Y A + KIG + +
Sbjct: 142 TYSLVIWKNSSGVEERIENIYSRHKIYKLSPETTYCLKVKAALLTSWKIGVYSPVHCIKT 201
Query: 1799 ALYIPEG----------------------DNTKVKIFYAGDQPMEVSLTKNGRVVQSDDR 1836
+ N ++ + + Q D
Sbjct: 202 TVENELPPPENIEVSVQNQNYVLKWDYTYANMTFQVQWLHAFLKRNPGNHLYKWKQIPDC 261
Query: 1837 FKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLP--GPPIGPLDVS 1894
+F + + ++ G Y + + S G+ + ++ I + P +
Sbjct: 262 ENVK---TTQCVFPQNVFQK--GIYLLRVQASDGNNTSFWSEEIKFDTEIQAFLLPPVFN 316
Query: 1895 -EITKHTCTLHWNPPKYDGGLKVT-----HYVVERRDISMPHWICISTTCHDTTFIVQGL 1948
+ ++ PK G V Y + + + I T V L
Sbjct: 317 IRSLSDSFHIYIGAPKQSGNTPVIQDYPLIYEIIFWENTSNAERKIIEK--KTDVTVPNL 374
Query: 1949 TEGQEYLFHVMAVNENGMGPP 1969
Y A +
Sbjct: 375 KPLTVYCVKARAHTMDEKLNK 395
Score = 45.0 bits (105), Expect = 2e-04
Identities = 26/167 (15%), Positives = 48/167 (28%), Gaps = 15/167 (8%)
Query: 1237 PLDVS-DITPESCSLSWKPPLDDGGSPITNYVVEKYESATGFWSKLSSFVRSPA----YD 1291
P V DI ++ L W + G+ + + ++ W KLS + +
Sbjct: 11 PQKVEVDIIDDNFILRWNRSDESVGN--VTFSFDYQKTGMDNWIKLSGCQNITSTKCNFS 68
Query: 1292 VFGLETNRQYRFRVRAENQYGVSEPLELDNSITAKFPFTVPDPPGQPQIVDWDTNNATLM 1351
L + + R+RAE S F G P++ + A ++
Sbjct: 69 SLKLNVYEEIKLRIRAEK-ENTSSW-----YEVDSFTPFRKAQIGPPEVHLEAEDKAIVI 122
Query: 1352 WDRPRTDGGSKIQ--GYKMLLKTPTGELPTTIWSKIRPTSSTVYCKD 1396
P T G + + + +I S
Sbjct: 123 HISPGTKDSVMWALDGLSFTYSLVIWKNSSGVEERIENIYSRHKIYK 169
>2v9t_A Roundabout homolog 1; structural protein-receptor complex,
developmental protein, domain, roundabout, chemotaxis,
LRR domain; 1.70A {Homo sapiens}
Length = 117
Score = 79.9 bits (197), Expect = 1e-17
Identities = 25/107 (23%), Positives = 42/107 (39%), Gaps = 8/107 (7%)
Query: 90 KPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISS-----GARYRVETAGG 144
P + DL+V G+ TL C+A G P P W + G + + + + +G
Sbjct: 9 PPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGS 68
Query: 145 VFRLHF--NEVTDVDNGDYTCEAYNSVGFAHTSS-RVKIGTPPRIDR 188
+F L + D G Y C A N +G A + +++
Sbjct: 69 LFFLRIVHGRKSRPDEGVYVCVARNYLGEAVSHDASLEVAAAAHHHH 115
Score = 79.9 bits (197), Expect = 1e-17
Identities = 25/107 (23%), Positives = 42/107 (39%), Gaps = 8/107 (7%)
Query: 1697 KPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISS-----GARYRVETAGG 1751
P + DL+V G+ TL C+A G P P W + G + + + + +G
Sbjct: 9 PPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGS 68
Query: 1752 VFRLHF--NEVTDVDNGDYTCEAYNSVGFAHTSS-RVKIGTPPRIDR 1795
+F L + D G Y C A N +G A + +++
Sbjct: 69 LFFLRIVHGRKSRPDEGVYVCVARNYLGEAVSHDASLEVAAAAHHHH 115
Score = 74.5 bits (183), Expect = 8e-16
Identities = 27/107 (25%), Positives = 36/107 (33%), Gaps = 8/107 (7%)
Query: 480 APEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPS-----ARHHIFAEGD 534
P I+ + + A C G P PTI W KG + + + G
Sbjct: 9 PPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGS 68
Query: 535 TYTLIINSVYGVDADE--YVCRAVNK-GGVKSTKAELIIMTAPKFNV 578
+ L I DE YVC A N G S A L + A +
Sbjct: 69 LFFLRIVHGRKSRPDEGVYVCVARNYLGEAVSHDASLEVAAAAHHHH 115
Score = 74.5 bits (183), Expect = 8e-16
Identities = 27/107 (25%), Positives = 36/107 (33%), Gaps = 8/107 (7%)
Query: 2087 APEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPS-----ARHHIFAEGD 2141
P I+ + + A C G P PTI W KG + + + G
Sbjct: 9 PPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGS 68
Query: 2142 TYTLIINSVYGVDADE--YVCRAVNK-GGVKSTKAELIIMTAPKFNV 2185
+ L I DE YVC A N G S A L + A +
Sbjct: 69 LFFLRIVHGRKSRPDEGVYVCVARNYLGEAVSHDASLEVAAAAHHHH 115
Score = 50.2 bits (120), Expect = 3e-07
Identities = 28/107 (26%), Positives = 38/107 (35%), Gaps = 13/107 (12%)
Query: 577 NVPPRF----RDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIES-----GGHFHVET 627
+ PPR D KGE + G P P I WY+ E +E+ H +
Sbjct: 7 DFPPRIVEHPSDLI-VSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLP 65
Query: 628 SERHAILTIRD--ASNVDTAPYRVVAENDLGMD-SAIVKIQISDRPD 671
S L I S D Y VA N LG S ++++
Sbjct: 66 SGSLFFLRIVHGRKSRPDEGVYVCVARNYLGEAVSHDASLEVAAAAH 112
Score = 42.5 bits (100), Expect = 1e-04
Identities = 26/106 (24%), Positives = 35/106 (33%), Gaps = 9/106 (8%)
Query: 1134 APKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDG------RIKFET 1187
P+I S D+ V GE T+ GRP PT W G+ V D R+ +
Sbjct: 9 PPRIVEHPS--DLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPS 66
Query: 1188 SENQTIYRNKSAKRATDSGSYTIQLVNTVGSD-SASCKVYVVDKPS 1232
+ K D G Y N +G S + V
Sbjct: 67 GSLFFLRIVHGRKSRPDEGVYVCVARNYLGEAVSHDASLEVAAAAH 112
Score = 32.1 bits (73), Expect = 0.51
Identities = 24/98 (24%), Positives = 35/98 (35%), Gaps = 17/98 (17%)
Query: 1412 PVIVEEQPNKPVMDLSGVRDITVKAGEDFSIHVPFMAFPQPAAFWFANDSII--DDSDTR 1469
P IVE P D+ V GE +++ P P W+ + D D R
Sbjct: 10 PRIVEH----P-------SDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPR 58
Query: 1470 VHKQLTMNSA----SLVVKNSQRSDGGQYRLQLKNPAG 1503
H+ L + + +V R D G Y +N G
Sbjct: 59 SHRMLLPSGSLFFLRIVHGRKSRPDEGVYVCVARNYLG 96
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold,
transmembrane, MHC lipoprotein, polymorphism; 3.90A
{Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3
PDB: 1wip_A 1wiq_A 3t0e_E
Length = 363
Score = 86.4 bits (213), Expect = 1e-17
Identities = 27/257 (10%), Positives = 64/257 (24%), Gaps = 33/257 (12%)
Query: 94 IVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEV 153
+ D + G+ LTL E+ P + + G + L +++
Sbjct: 100 LTANSDTHLLQGQSLTLTLESPPGSSPSVQCRSPRGKNIQGGK----------TLSVSQL 149
Query: 154 TDVDNGDYTCEAYNSVGFAHTSSRVKI--------------GTPPRIDRMPNALYIPEGD 199
D+G +TC + + + G
Sbjct: 150 ELQDSGTWTCTVLQNQKKVEFKIDIVVLAFQKASSIVYKKEGEQVEFSFPLAFTVEKLTG 209
Query: 200 NTKVKIFYAGD----QPMEVSLTKNGRVVQSDDR-FKFTVLDDY---IIIFIKEIRKEDA 251
+ ++ + L V+ + K + + + + +
Sbjct: 210 SGELWWQAERASSSKSWITFDLKNKEVSVKRVTQDPKLQMGKKLPLHLTLPQALPQYAGS 269
Query: 252 GDYTVNLSNSSGSVSGTFTINITGLPGPPIG-PLDVSEITKHTCTLHWNPPKYDGGLKVT 310
G+ T+ L +G + + + +V T L + +
Sbjct: 270 GNLTLALEAKTGKLHQEVNLVVMRATQLQKNLTCEVWGPTSPKLMLSLKLENKEAKVSKR 329
Query: 311 HYVVERRDISMPHWICI 327
V + W C+
Sbjct: 330 EKAVWVLNPEAGMWQCL 346
Score = 86.4 bits (213), Expect = 1e-17
Identities = 27/257 (10%), Positives = 64/257 (24%), Gaps = 33/257 (12%)
Query: 1701 IVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEV 1760
+ D + G+ LTL E+ P + + G + L +++
Sbjct: 100 LTANSDTHLLQGQSLTLTLESPPGSSPSVQCRSPRGKNIQGGK----------TLSVSQL 149
Query: 1761 TDVDNGDYTCEAYNSVGFAHTSSRVKI--------------GTPPRIDRMPNALYIPEGD 1806
D+G +TC + + + G
Sbjct: 150 ELQDSGTWTCTVLQNQKKVEFKIDIVVLAFQKASSIVYKKEGEQVEFSFPLAFTVEKLTG 209
Query: 1807 NTKVKIFYAGD----QPMEVSLTKNGRVVQSDDR-FKFTVLDDY---IIIFIKEIRKEDA 1858
+ ++ + L V+ + K + + + + +
Sbjct: 210 SGELWWQAERASSSKSWITFDLKNKEVSVKRVTQDPKLQMGKKLPLHLTLPQALPQYAGS 269
Query: 1859 GDYTVNLSNSSGSVSGTFTINITGLPGPPIG-PLDVSEITKHTCTLHWNPPKYDGGLKVT 1917
G+ T+ L +G + + + +V T L + +
Sbjct: 270 GNLTLALEAKTGKLHQEVNLVVMRATQLQKNLTCEVWGPTSPKLMLSLKLENKEAKVSKR 329
Query: 1918 HYVVERRDISMPHWICI 1934
V + W C+
Sbjct: 330 EKAVWVLNPEAGMWQCL 346
Score = 85.6 bits (211), Expect = 2e-17
Identities = 19/204 (9%), Positives = 52/204 (25%), Gaps = 38/204 (18%)
Query: 492 AIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGD----------------- 534
+ + CT + W ++ + +G
Sbjct: 6 GKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQG 65
Query: 535 TYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENV 594
+ LII ++ D+D Y+C + + + +L++ + +G+++
Sbjct: 66 NFPLIIKNLKIEDSDTYICEVED----QKEEVQLLVFGLT---ANS----DTHLLQGQSL 114
Query: 595 VVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAPYRVVAEND 654
+ + P + GG L++ D+ + +
Sbjct: 115 TLTLESPPGSSPSVQCRSPRGKNIQGGK----------TLSVSQLELQDSGTWTCTVLQN 164
Query: 655 LGMDSAIVKIQISDRPDPPQFPTV 678
+ I +
Sbjct: 165 QKKVEFKIDIVVLAFQKASSIVYK 188
Score = 75.2 bits (184), Expect = 5e-14
Identities = 22/194 (11%), Positives = 49/194 (25%), Gaps = 35/194 (18%)
Query: 105 GKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAG-----------------GVFR 147
G + L C A+ + W + + G + T G G F
Sbjct: 9 GDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFP 68
Query: 148 LHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFY 207
L + D+ Y CE + + ++ +G + + +
Sbjct: 69 LIIKNLKIEDSDTYICEVEDQKE-EVQLLVFGLTANSDT-------HLLQGQSLTLTLES 120
Query: 208 AGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSG 267
V + + + ++ +D+G +T + + V
Sbjct: 121 PPGSSPSVQCRSPRGKNIQGGK----------TLSVSQLELQDSGTWTCTVLQNQKKVEF 170
Query: 268 TFTINITGLPGPPI 281
I +
Sbjct: 171 KIDIVVLAFQKASS 184
Score = 75.2 bits (184), Expect = 5e-14
Identities = 22/194 (11%), Positives = 49/194 (25%), Gaps = 35/194 (18%)
Query: 1712 GKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAG-----------------GVFR 1754
G + L C A+ + W + + G + T G G F
Sbjct: 9 GDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFP 68
Query: 1755 LHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFY 1814
L + D+ Y CE + + ++ +G + + +
Sbjct: 69 LIIKNLKIEDSDTYICEVEDQKE-EVQLLVFGLTANSDT-------HLLQGQSLTLTLES 120
Query: 1815 AGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSG 1874
V + + + ++ +D+G +T + + V
Sbjct: 121 PPGSSPSVQCRSPRGKNIQGGK----------TLSVSQLELQDSGTWTCTVLQNQKKVEF 170
Query: 1875 TFTINITGLPGPPI 1888
I +
Sbjct: 171 KIDIVVLAFQKASS 184
Score = 74.4 bits (182), Expect = 9e-14
Identities = 28/223 (12%), Positives = 60/223 (26%), Gaps = 31/223 (13%)
Query: 489 NANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDA 548
+ + +Q + P++ + + TL ++ + D+
Sbjct: 105 DTHLLQGQSLTLTLESPPGSSPSVQCRSPRGKNIQGGK----------TLSVSQLELQDS 154
Query: 549 DEYVCRAVNKGGVKSTKAELIIMTAPK--------------FNVPPRFRDTAYFDKGENV 594
+ C + K +++++ K F+ P F GE
Sbjct: 155 GTWTCTVLQNQKKVEFKIDIVVLAFQKASSIVYKKEGEQVEFSFPLAFTVEKLTGSGELW 214
Query: 595 VVKIPFTGYPKPKITWYRDNE---VIESGGHFHVETSER---HAILTIRDASNVDTAPYR 648
K IT+ N+ V ++ ++ H L +
Sbjct: 215 WQAER-ASSSKSWITFDLKNKEVSVKRVTQDPKLQMGKKLPLHLTLPQALPQYAGSGNLT 273
Query: 649 VVAENDLGMDSAIVKIQISDRPDPPQFPTVEDIGHDSLALVWR 691
+ E G V + + + T E G S L+
Sbjct: 274 LALEAKTGKLHQEVNLVVMRATQLQKNLTCEVWGPTSPKLMLS 316
Score = 56.3 bits (135), Expect = 5e-08
Identities = 8/87 (9%), Positives = 27/87 (31%), Gaps = 10/87 (11%)
Query: 2096 NANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDA 2155
+ + +Q + P++ + + TL ++ + D+
Sbjct: 105 DTHLLQGQSLTLTLESPPGSSPSVQCRSPRGKNIQGGK----------TLSVSQLELQDS 154
Query: 2156 DEYVCRAVNKGGVKSTKAELIIMTAPK 2182
+ C + K +++++ K
Sbjct: 155 GTWTCTVLQNQKKVEFKIDIVVLAFQK 181
Score = 54.8 bits (131), Expect = 2e-07
Identities = 19/220 (8%), Positives = 42/220 (19%), Gaps = 49/220 (22%)
Query: 454 AQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQ-----------C 502
+ I KA I+ + F
Sbjct: 161 VLQNQK-----KVEFKIDIVVLAFQKASSIVYKKEGEQVEFSFPLAFTVEKLTGSGELWW 215
Query: 503 TITGCPKP----TISWLKGSREITPSARHHIFAEGDTY----TLIINSVYGVDADEYVCR 554
T + + G TL +
Sbjct: 216 QAERASSSKSWITFDLKNKEVSVKRVTQDPKLQMGKKLPLHLTLPQALPQYAGSGNLTLA 275
Query: 555 AVNKGGVKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDN 614
K G + L++M A + N+ ++ PK ++ +N
Sbjct: 276 LEAKTGKLHQEVNLVVMRATQLQK--------------NLTCEVWGPTSPKLMLSLKLEN 321
Query: 615 EVIESGGHFHVETSERHAILTIRDASNVDTAPYRVVAEND 654
+ + N + ++ + +
Sbjct: 322 KEAKVSKR-----------EKAVWVLNPEAGMWQCLLSDS 350
Score = 50.6 bits (120), Expect = 4e-06
Identities = 35/232 (15%), Positives = 58/232 (25%), Gaps = 45/232 (19%)
Query: 63 IAVNAIGKSEPSICTTPVKICEFVG---------GEKPDFIVPLKDLVVPLGKLLTLQCE 113
+ K E + + F GE+ +F PL V L L +
Sbjct: 160 TVLQNQKKVE---FKIDIVVLAFQKASSIVYKKEGEQVEFSFPLAFTVEKLTGSGELWWQ 216
Query: 114 ATGTPVPK----CRWLRNGREISSGARYR----VETAGGVFRLHFNEVTDVDNGDYTCEA 165
A K + + + L +G+ T
Sbjct: 217 AERASSSKSWITFDLKNKEVSVKRVTQDPKLQMGKKLPLHLTLPQALPQYAGSGNLTLAL 276
Query: 166 YNSVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQ 225
G H + + R ++ L T K+ +SL + +
Sbjct: 277 EAKTGKLHQEVNLVV---MRATQLQKNLTCEVWGPTSPKL--------MLSLKLENKEAK 325
Query: 226 SDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLP 277
R K + +AG + LS+S NI LP
Sbjct: 326 VSKREK-----------AVWVLNPEAGMWQCLLSDSGQV---LLESNIKVLP 363
Score = 50.6 bits (120), Expect = 4e-06
Identities = 35/232 (15%), Positives = 58/232 (25%), Gaps = 45/232 (19%)
Query: 1670 IAVNAIGKSEPSICTTPVKICEFVG---------GEKPDFIVPLKDLVVPLGKLLTLQCE 1720
+ K E + + F GE+ +F PL V L L +
Sbjct: 160 TVLQNQKKVE---FKIDIVVLAFQKASSIVYKKEGEQVEFSFPLAFTVEKLTGSGELWWQ 216
Query: 1721 ATGTPVPK----CRWLRNGREISSGARYR----VETAGGVFRLHFNEVTDVDNGDYTCEA 1772
A K + + + L +G+ T
Sbjct: 217 AERASSSKSWITFDLKNKEVSVKRVTQDPKLQMGKKLPLHLTLPQALPQYAGSGNLTLAL 276
Query: 1773 YNSVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQ 1832
G H + + R ++ L T K+ +SL + +
Sbjct: 277 EAKTGKLHQEVNLVV---MRATQLQKNLTCEVWGPTSPKL--------MLSLKLENKEAK 325
Query: 1833 SDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLP 1884
R K + +AG + LS+S NI LP
Sbjct: 326 VSKREK-----------AVWVLNPEAGMWQCLLSDSGQV---LLESNIKVLP 363
Score = 48.6 bits (115), Expect = 2e-05
Identities = 46/403 (11%), Positives = 91/403 (22%), Gaps = 86/403 (21%)
Query: 1432 ITVKAGEDFSIHVPFMAFPQPAAFWFANDSII----------------DDSDTRVHKQLT 1475
+ K G+ + W ++ I +D
Sbjct: 4 VLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWD 63
Query: 1476 MNSASLVVKNSQRSDGGQYRLQLKNPAGFDTATLHSRLRTLPD-------SVNPRCHLPS 1528
+ L++KN + D Y ++++ + L L D S+ P
Sbjct: 64 QGNFPLIIKNLKIEDSDTYICEVEDQKE-EVQLLVFGLTANSDTHLLQGQSLTLTLESPP 122
Query: 1529 STSKE----RPKFPTHPNHQPWLKWARASLT---------SKGVDSTEDSISL-VWSKPR 1574
+S P+ + L ++ L + E I + V +
Sbjct: 123 GSSPSVQCRSPRGKNIQGGKT-LSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVLAFQ- 180
Query: 1575 HDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEGKSIGSERGS----TAQ 1630
+ +K + + T + W +E S + +
Sbjct: 181 -----KASSIVYKKEGEQVEFSFPLAFTVEKLTGSGELWWQAERASSSKSWITFDLKNKE 235
Query: 1631 FLEREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPSICTTPVKIC 1690
+ V L+ L + + GK + ++
Sbjct: 236 VSVKRVTQDPKLQMGKKLPLHLTLPQALPQYAGSGNLTLALEAKTGKLHQEVNLVVMRA- 294
Query: 1691 EFVGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKC--RWLRNGREISSGARYRVET 1748
L CE G PK +E R +
Sbjct: 295 --------------------TQLQKNLTCEVWGPTSPKLMLSLKLENKEAKVSKREKA-- 332
Query: 1749 AGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPP 1791
V + + G + C +S I P
Sbjct: 333 ---------VWVLNPEAGMWQCLLSDSGQ---VLLESNIKVLP 363
Score = 48.3 bits (114), Expect = 2e-05
Identities = 14/123 (11%), Positives = 35/123 (28%), Gaps = 27/123 (21%)
Query: 2099 AIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGD----------------- 2141
+ + CT + W ++ + +G
Sbjct: 6 GKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQG 65
Query: 2142 TYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPRFRDTAYFESDVVV 2201
+ LII ++ D+D Y+C + + + +L++ DT + +
Sbjct: 66 NFPLIIKNLKIEDSDTYICEVED----QKEEVQLLVFGLT---ANS---DTHLLQGQSLT 115
Query: 2202 VVC 2204
+
Sbjct: 116 LTL 118
Score = 45.6 bits (107), Expect = 2e-04
Identities = 36/339 (10%), Positives = 72/339 (21%), Gaps = 70/339 (20%)
Query: 243 IKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPP- 301
IK ++ ED+ Y + + V + + GL L + T
Sbjct: 71 IKNLKIEDSDTYICEVEDQKEEV----QLLVFGLTANSDTHLLQGQSLTLTLESPPGSSP 126
Query: 302 -----KYDGGLKVTHYVVERRDISMPH---WICISTTCHDTTFIVQGLTEGQEYLFHVMA 353
G + + + W C Q+ + +
Sbjct: 127 SVQCRSPRGKNIQGGKTLSVSQLELQDSGTWTCTVLQ-------------NQKKVEFKID 173
Query: 354 VNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYW 413
+ + K + + L W +
Sbjct: 174 IVVLAFQKASS---IVYKKEGEQVEFSFPLAFTVEKLTGSGELWWQAERASSSKSWITFD 230
Query: 414 IDKHEV---GSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVY---AQNEAGLSLPSSAS 467
+ EV ++ + P + +P + + + G L +
Sbjct: 231 LKNKEVSVKRVTQDPKLQMGKKLPLHLTLPQ-ALPQYAGSGNLTLALEAKTG-KLHQEVN 288
Query: 468 NSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKP--TISWLKGSREITPSA 525
V C + G P +S ++E S
Sbjct: 289 LVVM--------------------RATQLQKNLTCEVWGPTSPKLMLSLKLENKEAKVSK 328
Query: 526 RHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKST 564
R V +A + C + G V
Sbjct: 329 REKAV-----------WVLNPEAGMWQCLLSDSGQVLLE 356
Score = 45.6 bits (107), Expect = 2e-04
Identities = 36/339 (10%), Positives = 72/339 (21%), Gaps = 70/339 (20%)
Query: 1850 IKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPP- 1908
IK ++ ED+ Y + + V + + GL L + T
Sbjct: 71 IKNLKIEDSDTYICEVEDQKEEV----QLLVFGLTANSDTHLLQGQSLTLTLESPPGSSP 126
Query: 1909 -----KYDGGLKVTHYVVERRDISMPH---WICISTTCHDTTFIVQGLTEGQEYLFHVMA 1960
G + + + W C Q+ + +
Sbjct: 127 SVQCRSPRGKNIQGGKTLSVSQLELQDSGTWTCTVLQ-------------NQKKVEFKID 173
Query: 1961 VNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYW 2020
+ + K + + L W +
Sbjct: 174 IVVLAFQKASS---IVYKKEGEQVEFSFPLAFTVEKLTGSGELWWQAERASSSKSWITFD 230
Query: 2021 IDKHEV---GSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVY---AQNEAGLSLPSSAS 2074
+ EV ++ + P + +P + + + G L +
Sbjct: 231 LKNKEVSVKRVTQDPKLQMGKKLPLHLTLPQ-ALPQYAGSGNLTLALEAKTG-KLHQEVN 288
Query: 2075 NSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKP--TISWLKGSREITPSA 2132
V C + G P +S ++E S
Sbjct: 289 LVVM--------------------RATQLQKNLTCEVWGPTSPKLMLSLKLENKEAKVSK 328
Query: 2133 RHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKST 2171
R V +A + C + G V
Sbjct: 329 REKAV-----------WVLNPEAGMWQCLLSDSGQVLLE 356
Score = 45.2 bits (106), Expect = 2e-04
Identities = 21/150 (14%), Positives = 42/150 (28%), Gaps = 6/150 (4%)
Query: 1136 KITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVS-----PDGRIKFETSEN 1190
+ + L+ + E + K + + EVS D +++
Sbjct: 195 EFSFPLAFTVEKLTGSGELWWQAERASSSKSWITFDLKNKEVSVKRVTQDPKLQMGKKLP 254
Query: 1191 QTIYRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYVVDKPSPPQG-PLDVSDITPESCS 1249
+ ++ + SG+ T+ L G + V+ + +V T
Sbjct: 255 LHLTLPQALPQYAGSGNLTLALEAKTGKLHQEVNLVVMRATQLQKNLTCEVWGPTSPKLM 314
Query: 1250 LSWKPPLDDGGSPITNYVVEKYESATGFWS 1279
LS K + V G W
Sbjct: 315 LSLKLENKEAKVSKREKAVWVLNPEAGMWQ 344
Score = 44.8 bits (105), Expect = 3e-04
Identities = 14/144 (9%), Positives = 24/144 (16%), Gaps = 24/144 (16%)
Query: 2061 AQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQ-----------C 2109
+ I KA I+ + F
Sbjct: 161 VLQNQK-----KVEFKIDIVVLAFQKASSIVYKKEGEQVEFSFPLAFTVEKLTGSGELWW 215
Query: 2110 TITGCPKP----TISWLKGSREITPSARHHIFAEGDTY----TLIINSVYGVDADEYVCR 2161
T + + G TL +
Sbjct: 216 QAERASSSKSWITFDLKNKEVSVKRVTQDPKLQMGKKLPLHLTLPQALPQYAGSGNLTLA 275
Query: 2162 AVNKGGVKSTKAELIIMTAPKFNV 2185
K G + L++M A +
Sbjct: 276 LEAKTGKLHQEVNLVVMRATQLQK 299
Score = 44.0 bits (103), Expect = 5e-04
Identities = 15/123 (12%), Positives = 34/123 (27%), Gaps = 14/123 (11%)
Query: 1145 DMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQTIYRNKSAKRATD 1204
D +L G+ T+T+ P+ + G+ ++ + D
Sbjct: 105 DTHLLQGQSLTLTLESPPGSSPSVQCRSPRGKNIQGGKTL-------SV---SQLEL-QD 153
Query: 1205 SGSYTIQLVNTVGSDSASCKVYVVDKPSPPQGPLDVSDITPESCSLSWKPPLDDGGSPIT 1264
SG++T ++ + V+ V E S+ +
Sbjct: 154 SGTWTCTVLQNQKKVEFKIDIVVLAFQKASS---IVYKKEGEQVEFSFPLAFTVEKLTGS 210
Query: 1265 NYV 1267
+
Sbjct: 211 GEL 213
Score = 39.4 bits (91), Expect = 0.013
Identities = 14/108 (12%), Positives = 30/108 (27%), Gaps = 18/108 (16%)
Query: 583 RDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVET--------------- 627
+ KG+ V + + + W N++ G T
Sbjct: 1 KKVVLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRS 60
Query: 628 --SERHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQISDRPDPP 673
+ + L I++ D+ Y E+ +V ++ D
Sbjct: 61 LWDQGNFPLIIKNLKIEDSDTYICEVEDQKEEVQLLV-FGLTANSDTH 107
Score = 33.6 bits (76), Expect = 0.73
Identities = 19/137 (13%), Positives = 34/137 (24%), Gaps = 17/137 (12%)
Query: 1146 MTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQTIY-RNKSAKRATD 1204
+ G+ +T S + W + + F T + R S + D
Sbjct: 4 VLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWD 63
Query: 1205 SGSYTIQLVNTVGSDSA--SCKV---------YVVDKPSPPQGPLDVSDITPESCSLSWK 1253
G++ + + N DS C+V V + L +
Sbjct: 64 QGNFPLIIKNLKIEDSDTYICEVEDQKEEVQLLVFGLTANSDTHLLQGQSLTLTLESPPG 123
Query: 1254 PP-----LDDGGSPITN 1265
G I
Sbjct: 124 SSPSVQCRSPRGKNIQG 140
Score = 33.6 bits (76), Expect = 0.75
Identities = 20/256 (7%), Positives = 54/256 (21%), Gaps = 36/256 (14%)
Query: 1324 TAKFPFTVPDPPGQPQIVDWDTNNATLMWDRPRTDGGSKIQGYKMLLKTPTGELPTTIWS 1383
T + T Q W +N + + + +
Sbjct: 11 TVELTCTASQKK-SIQFH-WKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFP 68
Query: 1384 ----KIRPTSSTVY-CKDTTMNSSNSEPGKQSGPVIVEEQPNKPVMDLSGVRDITVKAGE 1438
++ S Y C+ + + Q + D + G+
Sbjct: 69 LIIKNLKIEDSDTYICE-----VEDQKEEVQLLVFGLTANS-----------DTHLLQGQ 112
Query: 1439 DFSIHVPFMAFPQPAAFWFANDSIIDDSDTRVHKQLTMNSASLVVKNSQRSDGGQYRLQL 1498
++ + P+ + +L V + D G + +
Sbjct: 113 SLTLTLESPPGSSPSVQC-----------RSPRGKNIQGGKTLSVSQLELQDSGTWTCTV 161
Query: 1499 KNPAGFDTATLHSRLRTLPDSVNPRCHLPSSTSKERPKFPTHPNHQPWLKWARASLTSKG 1558
+ + + + + FP + ++
Sbjct: 162 LQNQKKVEFKIDIVVLAFQKASSIVYKKEGEQVEF--SFPLAFTVEKLTGSGELWWQAER 219
Query: 1559 VDSTEDSISLVWSKPR 1574
S++ I+
Sbjct: 220 ASSSKSWITFDLKNKE 235
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral
protein-immune system compl; HET: NAG SUC; 1.99A {Homo
sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B*
2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C*
3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A
3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Length = 184
Score = 81.6 bits (201), Expect = 2e-17
Identities = 18/192 (9%), Positives = 49/192 (25%), Gaps = 38/192 (19%)
Query: 492 AIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGD----------------- 534
+ + CT + W ++ + +G
Sbjct: 7 GKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQG 66
Query: 535 TYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENV 594
+ LII ++ D+D Y+C ++ + + ++ G+++
Sbjct: 67 NFPLIIKNLKIEDSDTYICEVEDQKE-EVQLLVFGLTANSDTHLLQ----------GQSL 115
Query: 595 VVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAPYRVVAEND 654
+ + P + GG L++ D+ + +
Sbjct: 116 TLTLESPPGSSPSVQCRSPRGKNIQGGK----------TLSVSQLELQDSGTWTCTVLQN 165
Query: 655 LGMDSAIVKIQI 666
+ I +
Sbjct: 166 QKKVEFKIDIVV 177
Score = 76.2 bits (187), Expect = 1e-15
Identities = 24/199 (12%), Positives = 54/199 (27%), Gaps = 36/199 (18%)
Query: 97 LKDLVVPL-GKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAG------------ 143
+K +V+ G + L C A+ + W + + G + T G
Sbjct: 1 MKKVVLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRR 60
Query: 144 -----GVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMPNALYIPEG 198
G F L + D+ Y CE + + ++ +G
Sbjct: 61 SLWDQGNFPLIIKNLKIEDSDTYICEVEDQKE-EVQLLVFGLTANSDT-------HLLQG 112
Query: 199 DNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNL 258
+ + + V + + + ++ +D+G +T +
Sbjct: 113 QSLTLTLESPPGSSPSVQCRSPRGKNIQGGK----------TLSVSQLELQDSGTWTCTV 162
Query: 259 SNSSGSVSGTFTINITGLP 277
+ V I +
Sbjct: 163 LQNQKKVEFKIDIVVLAFQ 181
Score = 76.2 bits (187), Expect = 1e-15
Identities = 24/199 (12%), Positives = 54/199 (27%), Gaps = 36/199 (18%)
Query: 1704 LKDLVVPL-GKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAG------------ 1750
+K +V+ G + L C A+ + W + + G + T G
Sbjct: 1 MKKVVLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRR 60
Query: 1751 -----GVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMPNALYIPEG 1805
G F L + D+ Y CE + + ++ +G
Sbjct: 61 SLWDQGNFPLIIKNLKIEDSDTYICEVEDQKE-EVQLLVFGLTANSDT-------HLLQG 112
Query: 1806 DNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNL 1865
+ + + V + + + ++ +D+G +T +
Sbjct: 113 QSLTLTLESPPGSSPSVQCRSPRGKNIQGGK----------TLSVSQLELQDSGTWTCTV 162
Query: 1866 SNSSGSVSGTFTINITGLP 1884
+ V I +
Sbjct: 163 LQNQKKVEFKIDIVVLAFQ 181
Score = 61.9 bits (150), Expect = 9e-11
Identities = 13/87 (14%), Positives = 28/87 (32%), Gaps = 10/87 (11%)
Query: 94 IVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEV 153
+ D + G+ LTL E+ P + + G + L +++
Sbjct: 101 LTANSDTHLLQGQSLTLTLESPPGSSPSVQCRSPRGKNIQGGK----------TLSVSQL 150
Query: 154 TDVDNGDYTCEAYNSVGFAHTSSRVKI 180
D+G +TC + + +
Sbjct: 151 ELQDSGTWTCTVLQNQKKVEFKIDIVV 177
Score = 61.9 bits (150), Expect = 9e-11
Identities = 13/87 (14%), Positives = 28/87 (32%), Gaps = 10/87 (11%)
Query: 1701 IVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEV 1760
+ D + G+ LTL E+ P + + G + L +++
Sbjct: 101 LTANSDTHLLQGQSLTLTLESPPGSSPSVQCRSPRGKNIQGGK----------TLSVSQL 150
Query: 1761 TDVDNGDYTCEAYNSVGFAHTSSRVKI 1787
D+G +TC + + +
Sbjct: 151 ELQDSGTWTCTVLQNQKKVEFKIDIVV 177
Score = 60.0 bits (145), Expect = 4e-10
Identities = 8/87 (9%), Positives = 26/87 (29%), Gaps = 10/87 (11%)
Query: 489 NANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDA 548
+ + +Q + P++ + TL ++ + D+
Sbjct: 106 DTHLLQGQSLTLTLESPPGSSPSVQCRSPRGKNIQ----------GGKTLSVSQLELQDS 155
Query: 549 DEYVCRAVNKGGVKSTKAELIIMTAPK 575
+ C + K +++++ K
Sbjct: 156 GTWTCTVLQNQKKVEFKIDIVVLAFQK 182
Score = 60.0 bits (145), Expect = 4e-10
Identities = 8/87 (9%), Positives = 26/87 (29%), Gaps = 10/87 (11%)
Query: 2096 NANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDA 2155
+ + +Q + P++ + TL ++ + D+
Sbjct: 106 DTHLLQGQSLTLTLESPPGSSPSVQCRSPRGKNIQ----------GGKTLSVSQLELQDS 155
Query: 2156 DEYVCRAVNKGGVKSTKAELIIMTAPK 2182
+ C + K +++++ K
Sbjct: 156 GTWTCTVLQNQKKVEFKIDIVVLAFQK 182
Score = 47.7 bits (113), Expect = 8e-06
Identities = 11/104 (10%), Positives = 29/104 (27%), Gaps = 18/104 (17%)
Query: 2099 AIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGD----------------- 2141
+ + CT + W ++ + +G
Sbjct: 7 GKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQG 66
Query: 2142 TYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNV 2185
+ LII ++ D+D Y+C ++ + + ++
Sbjct: 67 NFPLIIKNLKIEDSDTYICEVEDQKE-EVQLLVFGLTANSDTHL 109
Score = 40.3 bits (94), Expect = 0.002
Identities = 14/108 (12%), Positives = 30/108 (27%), Gaps = 18/108 (16%)
Query: 583 RDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVET--------------- 627
+ KG+ V + + + W N++ G T
Sbjct: 2 KKVVLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRS 61
Query: 628 --SERHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQISDRPDPP 673
+ + L I++ D+ Y E+ +V ++ D
Sbjct: 62 LWDQGNFPLIIKNLKIEDSDTYICEVEDQKEEVQLLV-FGLTANSDTH 108
Score = 40.3 bits (94), Expect = 0.002
Identities = 15/87 (17%), Positives = 31/87 (35%), Gaps = 11/87 (12%)
Query: 1145 DMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQTIYRNKSAKRATD 1204
D +L G+ T+T+ P+ SP G+ +T+ ++ D
Sbjct: 106 DTHLLQGQSLTLTLESPPGSSPSVQCR------SPRGKN---IQGGKTLSVSQL--ELQD 154
Query: 1205 SGSYTIQLVNTVGSDSASCKVYVVDKP 1231
SG++T ++ + V+
Sbjct: 155 SGTWTCTVLQNQKKVEFKIDIVVLAFQ 181
Score = 35.0 bits (80), Expect = 0.14
Identities = 13/105 (12%), Positives = 30/105 (28%), Gaps = 17/105 (16%)
Query: 1432 ITVKAGEDFSIHVPFMAFPQPAAFWFANDSI----------------IDDSDTRVHKQLT 1475
+ K G+ + W ++ I ++D
Sbjct: 5 VLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWD 64
Query: 1476 MNSASLVVKNSQRSDGGQYRLQLKNPAGFDTATLHSRLRTLPDSV 1520
+ L++KN + D Y ++++ + L L D+
Sbjct: 65 QGNFPLIIKNLKIEDSDTYICEVEDQKE-EVQLLVFGLTANSDTH 108
Score = 31.1 bits (70), Expect = 2.6
Identities = 15/83 (18%), Positives = 29/83 (34%), Gaps = 3/83 (3%)
Query: 1146 MTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQTI-YRNKSAKRATD 1204
+ G+ +T S + W + + F T + R S + D
Sbjct: 5 VLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWD 64
Query: 1205 SGSYTIQLVNTVGSDSAS--CKV 1225
G++ + + N DS + C+V
Sbjct: 65 QGNFPLIIKNLKIEDSDTYICEV 87
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil,
immunoglobulin, immune system, extracellular; HET: NAG;
3.10A {Homo sapiens} PDB: 3o4o_B*
Length = 349
Score = 85.3 bits (210), Expect = 2e-17
Identities = 40/255 (15%), Positives = 75/255 (29%), Gaps = 34/255 (13%)
Query: 454 AQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVP--LRNANAIQNHNAQFQCTITGCPKPT 511
+N + V KD ++ V + KPT
Sbjct: 98 LRNTTY-CSKVAFPLEVVQKDSCFNSPMKLPVHKLYIEYGIQRITCPNVDGYFPSSVKPT 156
Query: 512 ISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAV----NKGGVKSTKAE 567
I+W G +I +++ EG L + Y C + +
Sbjct: 157 ITWYMGCYKIQNF--NNVIPEGMN--LSFLIALISNNGNYTCVVTYPENGRTFHLTRTLT 212
Query: 568 LIIMTAPKFNVPPRFRD-----TAYFDKGENV----VVKIPFTGYPKPKITWYRDNEVIE 618
+ ++ +PK VPP + GE + V F + ++ W D + +
Sbjct: 213 VKVVGSPKNAVPPVIHSPNDHVVYEKEPGEELLIPCTVYFSFLMDSRNEVWWTIDGKKPD 272
Query: 619 SGGHFHVETSERH----------AILTIRDASNVDTA-PYRVVAENDLGMDSAIVKIQIS 667
IL+I+ ++ D Y A + G + K++
Sbjct: 273 DITIDVTINESISHSRTEDETRTQILSIKKVTSEDLKRSYVCHARSAKGEVAKAAKVKQ- 331
Query: 668 DRPDPPQFPTVEDIG 682
+ P++ TVE
Sbjct: 332 -KVPAPRY-TVELAC 344
Score = 78.0 bits (191), Expect = 6e-15
Identities = 32/204 (15%), Positives = 56/204 (27%), Gaps = 23/204 (11%)
Query: 492 AIQNHNAQFQCTITGCPKPTISWLKGSREITPS-------ARHHIFAEGDTYTLIINSVY 544
+ H +F + T+ W ++ + I E D L
Sbjct: 30 PLFEHFLKFNYSTAHSAGLTLIWYWTRQDRDLEEPINFRLPENRISKEKDV--LWFRPTL 87
Query: 545 GVDADEYVCRAVNKGGVKSTKAEL-IIMTAPKFNVPPRFRDTAYFDKGENVVVKIP---- 599
D Y C N L ++ FN P + + + + P
Sbjct: 88 LNDTGNYTCMLRNTTYCSKVAFPLEVVQKDSCFNSPMKLPVHKLYIEYGIQRITCPNVDG 147
Query: 600 -FTGYPKPKITWYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAPYRVVAENDLGM- 657
F KP ITWY I++ + E L+ A + Y V
Sbjct: 148 YFPSSVKPTITWYMGCYKIQNFNNVIPEGMN----LSFLIALISNNGNYTCVVTYPENGR 203
Query: 658 ---DSAIVKIQISDRPDPPQFPTV 678
+ + +++ P P +
Sbjct: 204 TFHLTRTLTVKVVGSPKNAVPPVI 227
Score = 73.4 bits (179), Expect = 2e-13
Identities = 27/229 (11%), Positives = 71/229 (31%), Gaps = 38/229 (16%)
Query: 91 PDFIV-PLKDLVVPLGKLLTLQC-----------EATGTPVPKCRWLRNGREIS------ 132
D+ + ++ + V + ++C + W ++
Sbjct: 7 DDWGLDTMRQIQVFEDEPARIKCPLFEHFLKFNYSTAHSAGLTLIWYWTRQDRDLEEPIN 66
Query: 133 -SGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPP----RID 187
R+ V L F D G+YTC N+ + + +++
Sbjct: 67 FRLPENRISKEKDV--LWFRPTLLNDTGNYTCMLRNTTYCSKVAFPLEVVQKDSCFNSPM 124
Query: 188 RMPNALYIPEGDNTKVKI-----FYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIF 242
++P E ++ ++ ++ +Q+ + V+ + + +
Sbjct: 125 KLPVHKLYIEYGIQRITCPNVDGYFPSSVKPTITWYMGCYKIQNFNN----VIPEGMNLS 180
Query: 243 IKEIRKEDAGDYT----VNLSNSSGSVSGTFTINITGLPGPPIGPLDVS 287
+ G+YT + + ++ T T+ + G P + P+ S
Sbjct: 181 FLIALISNNGNYTCVVTYPENGRTFHLTRTLTVKVVGSPKNAVPPVIHS 229
Score = 73.4 bits (179), Expect = 2e-13
Identities = 27/229 (11%), Positives = 71/229 (31%), Gaps = 38/229 (16%)
Query: 1698 PDFIV-PLKDLVVPLGKLLTLQC-----------EATGTPVPKCRWLRNGREIS------ 1739
D+ + ++ + V + ++C + W ++
Sbjct: 7 DDWGLDTMRQIQVFEDEPARIKCPLFEHFLKFNYSTAHSAGLTLIWYWTRQDRDLEEPIN 66
Query: 1740 -SGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPP----RID 1794
R+ V L F D G+YTC N+ + + +++
Sbjct: 67 FRLPENRISKEKDV--LWFRPTLLNDTGNYTCMLRNTTYCSKVAFPLEVVQKDSCFNSPM 124
Query: 1795 RMPNALYIPEGDNTKVKI-----FYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIF 1849
++P E ++ ++ ++ +Q+ + V+ + + +
Sbjct: 125 KLPVHKLYIEYGIQRITCPNVDGYFPSSVKPTITWYMGCYKIQNFNN----VIPEGMNLS 180
Query: 1850 IKEIRKEDAGDYT----VNLSNSSGSVSGTFTINITGLPGPPIGPLDVS 1894
+ G+YT + + ++ T T+ + G P + P+ S
Sbjct: 181 FLIALISNNGNYTCVVTYPENGRTFHLTRTLTVKVVGSPKNAVPPVIHS 229
Score = 65.7 bits (159), Expect = 6e-11
Identities = 32/192 (16%), Positives = 53/192 (27%), Gaps = 31/192 (16%)
Query: 109 TLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEA-YN 167
+ + P W +I + E L F +NG+YTC Y
Sbjct: 144 NVDGYFPSSVKPTITWYMGCYKIQNFNNVIPEGM----NLSFLIALISNNGNYTCVVTYP 199
Query: 168 SVGFAHTSSRV--------KIGTPPRIDRMPNALYIPEGDNT-------KVKIFYAGDQP 212
G +R P + PN + E + V + D
Sbjct: 200 ENGRTFHLTRTLTVKVVGSPKNAVPPVIHSPNDHVVYEKEPGEELLIPCTVYFSFLMDSR 259
Query: 213 MEVSLTKNGRVVQSDDRFKFTVLDDYI----------IIFIKEIRKED-AGDYTVNLSNS 261
EV T +G+ I+ IK++ ED Y + ++
Sbjct: 260 NEVWWTIDGKKPDDITIDVTINESISHSRTEDETRTQILSIKKVTSEDLKRSYVCHARSA 319
Query: 262 SGSVSGTFTINI 273
G V+ +
Sbjct: 320 KGEVAKAAKVKQ 331
Score = 65.7 bits (159), Expect = 6e-11
Identities = 32/192 (16%), Positives = 53/192 (27%), Gaps = 31/192 (16%)
Query: 1716 TLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEA-YN 1774
+ + P W +I + E L F +NG+YTC Y
Sbjct: 144 NVDGYFPSSVKPTITWYMGCYKIQNFNNVIPEGM----NLSFLIALISNNGNYTCVVTYP 199
Query: 1775 SVGFAHTSSRV--------KIGTPPRIDRMPNALYIPEGDNT-------KVKIFYAGDQP 1819
G +R P + PN + E + V + D
Sbjct: 200 ENGRTFHLTRTLTVKVVGSPKNAVPPVIHSPNDHVVYEKEPGEELLIPCTVYFSFLMDSR 259
Query: 1820 MEVSLTKNGRVVQSDDRFKFTVLDDYI----------IIFIKEIRKED-AGDYTVNLSNS 1868
EV T +G+ I+ IK++ ED Y + ++
Sbjct: 260 NEVWWTIDGKKPDDITIDVTINESISHSRTEDETRTQILSIKKVTSEDLKRSYVCHARSA 319
Query: 1869 SGSVSGTFTINI 1880
G V+ +
Sbjct: 320 KGEVAKAAKVKQ 331
Score = 63.0 bits (152), Expect = 4e-10
Identities = 27/141 (19%), Positives = 45/141 (31%), Gaps = 18/141 (12%)
Query: 62 IIAVNAIGKSEPSICTTPVKICEFVGGEKPDFIVPLKDLV---VPLGKLLTLQCEAT--- 115
++ G++ T VK+ P I D V G+ L + C
Sbjct: 195 VVTYPENGRTFHLTRTLTVKVVGSPKNAVPPVIHSPNDHVVYEKEPGEELLIPCTVYFSF 254
Query: 116 -GTPVPKCRWLRNGREIS----------SGARYRVETAGGVFRLHFNEVTDVD-NGDYTC 163
+ W +G++ S + R E L +VT D Y C
Sbjct: 255 LMDSRNEVWWTIDGKKPDDITIDVTINESISHSRTEDETRTQILSIKKVTSEDLKRSYVC 314
Query: 164 EAYNSVGFAHTSSRVKIGTPP 184
A ++ G +++VK P
Sbjct: 315 HARSAKGEVAKAAKVKQKVPA 335
Score = 63.0 bits (152), Expect = 4e-10
Identities = 27/141 (19%), Positives = 45/141 (31%), Gaps = 18/141 (12%)
Query: 1669 IIAVNAIGKSEPSICTTPVKICEFVGGEKPDFIVPLKDLV---VPLGKLLTLQCEAT--- 1722
++ G++ T VK+ P I D V G+ L + C
Sbjct: 195 VVTYPENGRTFHLTRTLTVKVVGSPKNAVPPVIHSPNDHVVYEKEPGEELLIPCTVYFSF 254
Query: 1723 -GTPVPKCRWLRNGREIS----------SGARYRVETAGGVFRLHFNEVTDVD-NGDYTC 1770
+ W +G++ S + R E L +VT D Y C
Sbjct: 255 LMDSRNEVWWTIDGKKPDDITIDVTINESISHSRTEDETRTQILSIKKVTSEDLKRSYVC 314
Query: 1771 EAYNSVGFAHTSSRVKIGTPP 1791
A ++ G +++VK P
Sbjct: 315 HARSAKGEVAKAAKVKQKVPA 335
Score = 62.6 bits (151), Expect = 5e-10
Identities = 24/146 (16%), Positives = 44/146 (30%), Gaps = 19/146 (13%)
Query: 2059 VYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRN---ANAIQNHNAQFQCTIT--- 2112
V E G + + + +V++ P +I + CT+
Sbjct: 195 VVTYPENGRTFHLTRTLTVKVVGSPKNAVPPVIHSPNDHVVYEKEPGEELLIPCTVYFSF 254
Query: 2113 -GCPKPTISWLKGSREITPSARHHIFAEG----------DTYTLIINSVYGVD-ADEYVC 2160
+ + W ++ E T L I V D YVC
Sbjct: 255 LMDSRNEVWWTIDGKKPDDITIDVTINESISHSRTEDETRTQILSIKKVTSEDLKRSYVC 314
Query: 2161 RAVNKGGVKSTKAELII-MTAPKFNV 2185
A + G + A++ + AP++ V
Sbjct: 315 HARSAKGEVAKAAKVKQKVPAPRYTV 340
Score = 53.7 bits (128), Expect = 3e-07
Identities = 22/135 (16%), Positives = 39/135 (28%), Gaps = 11/135 (8%)
Query: 2061 AQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVP--LRNANAIQNHNAQFQCTITGCPKPT 2118
+N + V KD ++ V + KPT
Sbjct: 98 LRNTTY-CSKVAFPLEVVQKDSCFNSPMKLPVHKLYIEYGIQRITCPNVDGYFPSSVKPT 156
Query: 2119 ISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAV----NKGGVKSTKAE 2174
I+W G +I +++ EG L + Y C + +
Sbjct: 157 ITWYMGCYKIQNF--NNVIPEGM--NLSFLIALISNNGNYTCVVTYPENGRTFHLTRTLT 212
Query: 2175 LIIMTAPKFNVPPRF 2189
+ ++ +PK VPP
Sbjct: 213 VKVVGSPKNAVPPVI 227
Score = 49.9 bits (118), Expect = 6e-06
Identities = 19/115 (16%), Positives = 31/115 (26%), Gaps = 11/115 (9%)
Query: 2099 AIQNHNAQFQCTITGCPKPTISWLKGSREITPS-------ARHHIFAEGDTYTLIINSVY 2151
+ H +F + T+ W ++ + I E D L
Sbjct: 30 PLFEHFLKFNYSTAHSAGLTLIWYWTRQDRDLEEPINFRLPENRISKEKDV--LWFRPTL 87
Query: 2152 GVDADEYVCRAVNKGGVKSTKAEL-IIMTAPKFNVPPRF-RDTAYFESDVVVVVC 2204
D Y C N L ++ FN P + Y E + + C
Sbjct: 88 LNDTGNYTCMLRNTTYCSKVAFPLEVVQKDSCFNSPMKLPVHKLYIEYGIQRITC 142
Score = 44.9 bits (105), Expect = 2e-04
Identities = 24/114 (21%), Positives = 37/114 (32%), Gaps = 15/114 (13%)
Query: 1142 SIRDMTVLAGEEFTITVPF-----------SGRPKPTPIWTVNGDEVSPDGRIKFETSEN 1190
++R + V E I P + T IW + + I F EN
Sbjct: 13 TMRQIQVFEDEPARIKCPLFEHFLKFNYSTAHSAGLTLIWYWTRQDRDLEEPINFRLPEN 72
Query: 1191 QTIYRNKSAK----RATDSGSYTIQLVNTVGSDSASCKVYVVDKPSPPQGPLDV 1240
+ D+G+YT L NT + + VV K S P+ +
Sbjct: 73 RISKEKDVLWFRPTLLNDTGNYTCMLRNTTYCSKVAFPLEVVQKDSCFNSPMKL 126
Score = 39.1 bits (90), Expect = 0.014
Identities = 23/179 (12%), Positives = 53/179 (29%), Gaps = 16/179 (8%)
Query: 1324 TAKFPFTVPDPPGQPQIVDWDTNNATLMWDRPRTDGGSKIQGYKMLLKTPTGELPTTIW- 1382
A+ + + + + TL+W R D + L + + +W
Sbjct: 24 PARIKCPLFEHFLKFNYSTAHSAGLTLIWYWTRQDRDLEEPINFRLPENRISKEKDVLWF 83
Query: 1383 SKIRPTSSTVY-CKDTTMNSSNSEPGKQSGPVIVEEQPNKPVMDLSGVRDITVKAGEDFS 1441
+ Y C N++ K + P+ V ++ + +
Sbjct: 84 RPTLLNDTGNYTC--MLRNTTYCS--KVAFPLEVVQKDSCFNSPMKLPVHKLYIEYGIQR 139
Query: 1442 IHVPFM-----AFPQPAAFWFANDSIIDDSDTRVHKQLTMNSASLVVKNSQRSDGGQYR 1495
I P + + +P W+ I + + + + +L + S+ G Y
Sbjct: 140 ITCPNVDGYFPSSVKPTITWYMGCYKIQNFNNVIPE-----GMNLSFLIALISNNGNYT 193
Score = 36.4 bits (83), Expect = 0.11
Identities = 18/120 (15%), Positives = 30/120 (25%), Gaps = 15/120 (12%)
Query: 1426 LSGVRDITVKAGEDFSIHVPFMAFPQPAAF-----------WF----ANDSIIDDSDTRV 1470
L +R I V E I P + W+ D +
Sbjct: 11 LDTMRQIQVFEDEPARIKCPLFEHFLKFNYSTAHSAGLTLIWYWTRQDRDLEEPINFRLP 70
Query: 1471 HKQLTMNSASLVVKNSQRSDGGQYRLQLKNPAGFDTATLHSRLRTLPDSVNPRCHLPSST 1530
+++ L + + +D G Y L+N + N LP
Sbjct: 71 ENRISKEKDVLWFRPTLLNDTGNYTCMLRNTTYCSKVAFPLEVVQKDSCFNSPMKLPVHK 130
Score = 36.0 bits (82), Expect = 0.12
Identities = 19/115 (16%), Positives = 31/115 (26%), Gaps = 16/115 (13%)
Query: 1135 PKITSDLSIRDMTVLAGEEFTI----TVPFSGRPKPTPIWTVNGDEV-SPDGRIKFETSE 1189
P I S GEE I F + WT++G + + S
Sbjct: 225 PVIHSPNDHVVYEKEPGEELLIPCTVYFSFLMDSRNEVWWTIDGKKPDDITIDVTINESI 284
Query: 1190 NQTIYRN---------KSAKRATDSGSYTIQLVNTVGSDSASCKVYVVDKPSPPQ 1235
+ + + K SY + G + + V K P+
Sbjct: 285 SHSRTEDETRTQILSIKKVTSEDLKRSYVCHARSAKGEVAKA--AKVKQKVPAPR 337
Score = 34.5 bits (78), Expect = 0.45
Identities = 11/91 (12%), Positives = 29/91 (31%), Gaps = 5/91 (5%)
Query: 208 AGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIII-----FIKEIRKEDAGDYTVNLSNSS 262
A + + + ++ F + ++ I + + D G+YT L N++
Sbjct: 43 AHSAGLTLIWYWTRQDRDLEEPINFRLPENRISKEKDVLWFRPTLLNDTGNYTCMLRNTT 102
Query: 263 GSVSGTFTINITGLPGPPIGPLDVSEITKHT 293
F + + P+ + +
Sbjct: 103 YCSKVAFPLEVVQKDSCFNSPMKLPVHKLYI 133
Score = 34.5 bits (78), Expect = 0.45
Identities = 11/91 (12%), Positives = 29/91 (31%), Gaps = 5/91 (5%)
Query: 1815 AGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIII-----FIKEIRKEDAGDYTVNLSNSS 1869
A + + + ++ F + ++ I + + D G+YT L N++
Sbjct: 43 AHSAGLTLIWYWTRQDRDLEEPINFRLPENRISKEKDVLWFRPTLLNDTGNYTCMLRNTT 102
Query: 1870 GSVSGTFTINITGLPGPPIGPLDVSEITKHT 1900
F + + P+ + +
Sbjct: 103 YCSKVAFPLEVVQKDSCFNSPMKLPVHKLYI 133
Score = 34.1 bits (77), Expect = 0.48
Identities = 13/91 (14%), Positives = 26/91 (28%), Gaps = 14/91 (15%)
Query: 1432 ITVKAGEDFSIH----VPFMAFPQPAAFWFANDSIIDDSDTRVHKQLTMN---------S 1478
+ GE+ I F+ + +W + DD V +++ +
Sbjct: 236 YEKEPGEELLIPCTVYFSFLMDSRNEVWWTIDGKKPDDITIDVTINESISHSRTEDETRT 295
Query: 1479 ASLVVKNSQRSD-GGQYRLQLKNPAGFDTAT 1508
L +K D Y ++ G
Sbjct: 296 QILSIKKVTSEDLKRSYVCHARSAKGEVAKA 326
Score = 30.6 bits (68), Expect = 7.0
Identities = 20/120 (16%), Positives = 35/120 (29%), Gaps = 14/120 (11%)
Query: 1131 PPCAPKITSDLSIRDMTVLAGEEFTITVP-----FSGRPKPTPIWTVNGDEVSPDGRIKF 1185
+ + + IT P F KPT W + ++ +
Sbjct: 115 QKDSCFNSPMKLPVHKLYIEYGIQRITCPNVDGYFPSSVKPTITWYMGCYKIQNFNNVIP 174
Query: 1186 ETSENQTIYRNKSAKRATDSGSYT----IQLVNTVGSDSASCKVYVVDKPSPPQGPLDVS 1241
E N + A +++G+YT + + V VV P P+ S
Sbjct: 175 E-GMNLSF---LIALI-SNNGNYTCVVTYPENGRTFHLTRTLTVKVVGSPKNAVPPVIHS 229
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system;
HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Length = 262
Score = 83.4 bits (206), Expect = 2e-17
Identities = 29/197 (14%), Positives = 53/197 (26%), Gaps = 26/197 (13%)
Query: 481 PEIIVPLRNANAIQNHNAQFQCTITGCPKP-TISWLKGSREITPSARHHIFAEGDTYTLI 539
I + + Q C + P + W S +
Sbjct: 2 AVITLQPPWVSVFQEETVTLHCEVLHLPGSSSTQWFLNGTATQTSTP----------SYR 51
Query: 540 INSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVK-I 598
I S D+ EY C+ +S +L I F +GE + ++
Sbjct: 52 ITSASVNDSGEYRCQRGL--SGRSDPIQLEIHRGWLLLQVSS----RVFTEGEPLALRCH 105
Query: 599 PFTGYPKPKITWYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAPYRVVAENDLGMD 658
+ + +YR+ + + F S LTI + Y
Sbjct: 106 AWKDKLVYNVLYYRNGKAFK----FFHWNSN----LTILKTNISHNGTYHCSGMGKHRYT 157
Query: 659 SAIVKIQISDRPDPPQF 675
SA + + + + P
Sbjct: 158 SAGISVTVKELFPAPVL 174
Score = 82.7 bits (204), Expect = 4e-17
Identities = 26/194 (13%), Positives = 57/194 (29%), Gaps = 23/194 (11%)
Query: 90 KPDFIVPLKDLVVPLGKLLTLQCEATGTPVP-KCRWLRNGREISSGARYRVETAGGVFRL 148
K + + V + +TL CE P +W NG +
Sbjct: 1 KAVITLQPPWVSVFQEETVTLHCEVLHLPGSSSTQWFLNGTATQTSTP----------SY 50
Query: 149 HFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVK-IFY 207
+ D+G+Y C+ S + + ++ + ++ EG+ ++ +
Sbjct: 51 RITSASVNDSGEYRCQRGLSGRSDPIQLEIH--RGWLLLQVSSRVFT-EGEPLALRCHAW 107
Query: 208 AGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSG 267
V +NG+ + + I + G Y + S
Sbjct: 108 KDKLVYNVLYYRNGKAFKFFHWNS--------NLTILKTNISHNGTYHCSGMGKHRYTSA 159
Query: 268 TFTINITGLPGPPI 281
++ + L P+
Sbjct: 160 GISVTVKELFPAPV 173
Score = 82.7 bits (204), Expect = 4e-17
Identities = 26/194 (13%), Positives = 57/194 (29%), Gaps = 23/194 (11%)
Query: 1697 KPDFIVPLKDLVVPLGKLLTLQCEATGTPVP-KCRWLRNGREISSGARYRVETAGGVFRL 1755
K + + V + +TL CE P +W NG +
Sbjct: 1 KAVITLQPPWVSVFQEETVTLHCEVLHLPGSSSTQWFLNGTATQTSTP----------SY 50
Query: 1756 HFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVK-IFY 1814
+ D+G+Y C+ S + + ++ + ++ EG+ ++ +
Sbjct: 51 RITSASVNDSGEYRCQRGLSGRSDPIQLEIH--RGWLLLQVSSRVFT-EGEPLALRCHAW 107
Query: 1815 AGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSG 1874
V +NG+ + + I + G Y + S
Sbjct: 108 KDKLVYNVLYYRNGKAFKFFHWNS--------NLTILKTNISHNGTYHCSGMGKHRYTSA 159
Query: 1875 TFTINITGLPGPPI 1888
++ + L P+
Sbjct: 160 GISVTVKELFPAPV 173
Score = 76.5 bits (188), Expect = 5e-15
Identities = 32/192 (16%), Positives = 52/192 (27%), Gaps = 19/192 (9%)
Query: 91 PDFIVPLKDLVVPLGKLLTLQCEAT-GTPVPKCRWLRNGREISSGARYRVETAGGVFRLH 149
++ + V G+ L L+C A V + RNG+ L
Sbjct: 83 GWLLLQVSSRVFTEGEPLALRCHAWKDKLVYNVLYYRNGKAFKFFHWNSN--------LT 134
Query: 150 FNEVTDVDNGDYTCEAYNSVGFAHTSSR--VKIGTPPRIDRMPNALYIPEGDNTKVKIF- 206
+ NG Y C + VK P + + EG+ V +
Sbjct: 135 ILKTNISHNGTYHCSGMGKHRYTSAGISVTVKELFPAPVLNASVTSPLLEGNL--VTLSC 192
Query: 207 YAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSV- 265
L + I R+ED+G Y + G+V
Sbjct: 193 ETKLLLQRPGLQLYFSFYMGSKTLRGRNTSS--EYQILTARREDSGLYWCEAATEDGNVL 250
Query: 266 --SGTFTINITG 275
S + + G
Sbjct: 251 KRSPELELQVLG 262
Score = 76.5 bits (188), Expect = 5e-15
Identities = 32/192 (16%), Positives = 52/192 (27%), Gaps = 19/192 (9%)
Query: 1698 PDFIVPLKDLVVPLGKLLTLQCEAT-GTPVPKCRWLRNGREISSGARYRVETAGGVFRLH 1756
++ + V G+ L L+C A V + RNG+ L
Sbjct: 83 GWLLLQVSSRVFTEGEPLALRCHAWKDKLVYNVLYYRNGKAFKFFHWNSN--------LT 134
Query: 1757 FNEVTDVDNGDYTCEAYNSVGFAHTSSR--VKIGTPPRIDRMPNALYIPEGDNTKVKIF- 1813
+ NG Y C + VK P + + EG+ V +
Sbjct: 135 ILKTNISHNGTYHCSGMGKHRYTSAGISVTVKELFPAPVLNASVTSPLLEGNL--VTLSC 192
Query: 1814 YAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSV- 1872
L + I R+ED+G Y + G+V
Sbjct: 193 ETKLLLQRPGLQLYFSFYMGSKTLRGRNTSS--EYQILTARREDSGLYWCEAATEDGNVL 250
Query: 1873 --SGTFTINITG 1882
S + + G
Sbjct: 251 KRSPELELQVLG 262
Score = 66.5 bits (162), Expect = 1e-11
Identities = 28/218 (12%), Positives = 55/218 (25%), Gaps = 31/218 (14%)
Query: 457 EAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTIT-GCPKPTISWL 515
+ GLS S + + + + + +C + +
Sbjct: 66 QRGLSGRSDPIQLEIHRGWLLLQVSSRVF-------TEGEPLALRCHAWKDKLVYNVLYY 118
Query: 516 KGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELII---MT 572
+ + L I Y C + K S + +
Sbjct: 119 RNGKAFKFF--------HWNSNLTILKTNISHNGTYHCSGMGKHRYTSAGISVTVKELFP 170
Query: 573 APKFNVPPRFRDTAYFDKGENVVVKIPFTGYP-KPKITWYRDNEVIESGGHFHVETSERH 631
AP N T+ +G V + +P + Y G +
Sbjct: 171 APVLNASV----TSPLLEGNLVTLSCETKLLLQRPGLQLYFSFY----MGSKTLRGRNTS 222
Query: 632 AILTIRDASNVDTAPYRVVAENDLG---MDSAIVKIQI 666
+ I A D+ Y A + G S +++Q+
Sbjct: 223 SEYQILTARREDSGLYWCEAATEDGNVLKRSPELELQV 260
Score = 51.8 bits (124), Expect = 9e-07
Identities = 17/145 (11%), Positives = 35/145 (24%), Gaps = 22/145 (15%)
Query: 2064 EAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTIT-GCPKPTISWL 2122
+ GLS S + + + + + +C + +
Sbjct: 66 QRGLSGRSDPIQLEIHRGWLLLQVSSRVF-------TEGEPLALRCHAWKDKLVYNVLYY 118
Query: 2123 KGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELII---MT 2179
+ + L I Y C + K S + +
Sbjct: 119 RNGKAFKFF--------HWNSNLTILKTNISHNGTYHCSGMGKHRYTSAGISVTVKELFP 170
Query: 2180 APKFNVPPRFRDTAYFESDVVVVVC 2204
AP N + E ++V + C
Sbjct: 171 APVLNASV---TSPLLEGNLVTLSC 192
Score = 48.8 bits (116), Expect = 8e-06
Identities = 17/118 (14%), Positives = 30/118 (25%), Gaps = 16/118 (13%)
Query: 2088 PEIIVPLRNANAIQNHNAQFQCTITGCPKP-TISWLKGSREITPSARHHIFAEGDTYTLI 2146
I + + Q C + P + W S +
Sbjct: 2 AVITLQPPWVSVFQEETVTLHCEVLHLPGSSSTQWFLNGTATQTSTP----------SYR 51
Query: 2147 INSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPRFRDTAYFESDVVVVVC 2204
I S D+ EY C+ +S +L I + E + + + C
Sbjct: 52 ITSASVNDSGEYRCQRGL--SGRSDPIQLEIHRGWLLLQVS---SRVFTEGEPLALRC 104
Score = 46.4 bits (110), Expect = 5e-05
Identities = 15/119 (12%), Positives = 28/119 (23%), Gaps = 19/119 (15%)
Query: 63 IAVNAIGKSEPSICTTPVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVP-- 120
+ + + + + P + ++ G L+TL CE
Sbjct: 149 SGMGKHRYT-----SAGISVTVKELFPAPVLNASVTSPLLE-GNLVTLSCETKLLLQRPG 202
Query: 121 ---KCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSS 176
+ + + D+G Y CEA G S
Sbjct: 203 LQLYFSFYMGSKTLRGRNTSS--------EYQILTARREDSGLYWCEAATEDGNVLKRS 253
Score = 46.4 bits (110), Expect = 5e-05
Identities = 15/119 (12%), Positives = 28/119 (23%), Gaps = 19/119 (15%)
Query: 1670 IAVNAIGKSEPSICTTPVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVP-- 1727
+ + + + + P + ++ G L+TL CE
Sbjct: 149 SGMGKHRYT-----SAGISVTVKELFPAPVLNASVTSPLLE-GNLVTLSCETKLLLQRPG 202
Query: 1728 ---KCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSS 1783
+ + + D+G Y CEA G S
Sbjct: 203 LQLYFSFYMGSKTLRGRNTSS--------EYQILTARREDSGLYWCEAATEDGNVLKRS 253
Score = 40.3 bits (94), Expect = 0.005
Identities = 16/96 (16%), Positives = 28/96 (29%), Gaps = 10/96 (10%)
Query: 1141 LSIRDMTVLAGEEFTIT-VPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQTIYRNKSA 1199
L + GE + + + ++ NG F + N TI
Sbjct: 87 LQVSSRVFTEGEPLALRCHAWKDKLVYNVLYYRNGKAFKF-----FHWNSNLTI----LK 137
Query: 1200 KRATDSGSYTIQLVNTVGSDSASCKVYVVDKPSPPQ 1235
+ +G+Y + SA V V + P
Sbjct: 138 TNISHNGTYHCSGMGKHRYTSAGISVTVKELFPAPV 173
Score = 38.7 bits (90), Expect = 0.013
Identities = 20/124 (16%), Positives = 38/124 (30%), Gaps = 20/124 (16%)
Query: 454 AQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKP--- 510
+ +SA SV +K+ AP + + + ++ + C +
Sbjct: 150 GMGKHR---YTSAGISVTVKEL--FPAPVLNASV-TSPLLEGNLVTLSCETKLLLQRPGL 203
Query: 511 --TISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNK-GGVKSTKAE 567
S+ GS+ + I + D+ Y C A + G V E
Sbjct: 204 QLYFSFYMGSKTLRGRNTSS--------EYQILTARREDSGLYWCEAATEDGNVLKRSPE 255
Query: 568 LIIM 571
L +
Sbjct: 256 LELQ 259
Score = 38.7 bits (90), Expect = 0.013
Identities = 20/124 (16%), Positives = 38/124 (30%), Gaps = 20/124 (16%)
Query: 2061 AQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKP--- 2117
+ +SA SV +K+ AP + + + ++ + C +
Sbjct: 150 GMGKHR---YTSAGISVTVKEL--FPAPVLNASV-TSPLLEGNLVTLSCETKLLLQRPGL 203
Query: 2118 --TISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNK-GGVKSTKAE 2174
S+ GS+ + I + D+ Y C A + G V E
Sbjct: 204 QLYFSFYMGSKTLRGRNTSS--------EYQILTARREDSGLYWCEAATEDGNVLKRSPE 255
Query: 2175 LIIM 2178
L +
Sbjct: 256 LELQ 259
Score = 35.3 bits (81), Expect = 0.16
Identities = 20/107 (18%), Positives = 31/107 (28%), Gaps = 16/107 (14%)
Query: 1135 PKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPI-WTVNGDEVSPDGRIKFETSENQTI 1193
IT L ++V E T+ P + W +NG + + I
Sbjct: 2 AVIT--LQPPWVSVFQEETVTLHCEVLHLPGSSSTQWFLNGTATQTS-------TPSYRI 52
Query: 1194 YRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYVVDKPSPPQGPLDV 1240
DSG Y Q + SD +++ Q V
Sbjct: 53 TS----ASVNDSGEYRCQRGLSGRSDPIQLEIHRG--WLLLQVSSRV 93
Score = 34.1 bits (78), Expect = 0.40
Identities = 14/99 (14%), Positives = 28/99 (28%), Gaps = 8/99 (8%)
Query: 1407 GKQSGPV--IVEEQPNKPVMDLSGVRDITVKAGEDFSIHVPFMAFPQPAAFWFANDSIID 1464
S + V+E PV++ S + G ++ Q +
Sbjct: 155 RYTSAGISVTVKELFPAPVLNASV--TSPLLEGNLVTLSCETKLLLQRPGLQLYFSFYMG 212
Query: 1465 DSDTRVHKQLTMNSASLVVKNSQRSDGGQYRLQLKNPAG 1503
+ S+ + ++R D G Y + G
Sbjct: 213 SK----TLRGRNTSSEYQILTARREDSGLYWCEAATEDG 247
Score = 31.8 bits (72), Expect = 2.3
Identities = 17/150 (11%), Positives = 44/150 (29%), Gaps = 22/150 (14%)
Query: 1378 PTTIWSK----IRPTSSTVYCKDTTMNSS-----NSEPGKQSGPVIVEEQPNKPVMDLSG 1428
+T W + ++ + ++N S +S P+ +E ++ +S
Sbjct: 32 SSTQWFLNGTATQTSTPSYRITSASVNDSGEYRCQRGLSGRSDPIQLEIHRGWLLLQVS- 90
Query: 1429 VRDITVKAGEDFSIHVPFMAFPQPAAF-WFANDSIIDDSDTRVHKQLTMNSASLVVKNSQ 1487
GE ++ ++ N +++L + +
Sbjct: 91 --SRVFTEGEPLALRCHAWKDKLVYNVLYYRNGKAFKFFHW---------NSNLTILKTN 139
Query: 1488 RSDGGQYRLQLKNPAGFDTATLHSRLRTLP 1517
S G Y + +A + ++ L
Sbjct: 140 ISHNGTYHCSGMGKHRYTSAGISVTVKELF 169
Score = 31.4 bits (71), Expect = 2.7
Identities = 21/123 (17%), Positives = 44/123 (35%), Gaps = 14/123 (11%)
Query: 1108 VC-AVNAAGQGPWSSSSDIIMCCAPPCAPKITSDLSIRDMTVLAGEEFTITVPFSGRP-K 1165
C + +S+ + AP + + ++ +L G T++ +
Sbjct: 147 HCSGMGKHRY---TSAGISVTVKELFPAPVLNASVTS---PLLEGNLVTLSCETKLLLQR 200
Query: 1166 PTPIWTVNGDEVSPDGRIKFETSENQTIYRNKSAKRATDSGSYTIQLVNTVGS-DSASCK 1224
P + S R + +SE Y+ +A+R DSG Y + G+ S +
Sbjct: 201 PGLQLYFSFYMGSKTLRGRNTSSE----YQILTARRE-DSGLYWCEAATEDGNVLKRSPE 255
Query: 1225 VYV 1227
+ +
Sbjct: 256 LEL 258
>1pd6_A Cardiac MYBP-C;, myosin-binding protein C, cardiac-type, domain C2;
IG domain, structural protein; NMR {Homo sapiens} SCOP:
b.1.1.4
Length = 104
Score = 78.6 bits (194), Expect = 2e-17
Identities = 21/86 (24%), Positives = 35/86 (40%), Gaps = 3/86 (3%)
Query: 89 EKPDFIVPLKDLV-VPLGKLLTLQCEATGTPVPKCRWLRNGREIS-SGARYRVETAGGVF 146
+ F L+ V G + L E + +WL+NG+EI SG++Y E+ G
Sbjct: 14 KSTAFQKKLEPAYQVSKGHKIRLTVELAD-HDAEVKWLKNGQEIQMSGSKYIFESIGAKR 72
Query: 147 RLHFNEVTDVDNGDYTCEAYNSVGFA 172
L ++ + D+ Y C
Sbjct: 73 TLTISQCSLADDAAYQCVVGGEKCST 98
Score = 78.6 bits (194), Expect = 2e-17
Identities = 21/86 (24%), Positives = 35/86 (40%), Gaps = 3/86 (3%)
Query: 1696 EKPDFIVPLKDLV-VPLGKLLTLQCEATGTPVPKCRWLRNGREIS-SGARYRVETAGGVF 1753
+ F L+ V G + L E + +WL+NG+EI SG++Y E+ G
Sbjct: 14 KSTAFQKKLEPAYQVSKGHKIRLTVELAD-HDAEVKWLKNGQEIQMSGSKYIFESIGAKR 72
Query: 1754 RLHFNEVTDVDNGDYTCEAYNSVGFA 1779
L ++ + D+ Y C
Sbjct: 73 TLTISQCSLADDAAYQCVVGGEKCST 98
Score = 74.7 bits (184), Expect = 5e-16
Identities = 21/94 (22%), Positives = 32/94 (34%), Gaps = 7/94 (7%)
Query: 479 KAPEIIVPLRNANAIQ-NHNAQFQCTITGCPKPTISWLKGSREITPSARHHIF-AEGDTY 536
K+ L A + H + + + WLK +EI S +IF + G
Sbjct: 14 KSTAFQKKLEPAYQVSKGHKIRLTVELAD-HDAEVKWLKNGQEIQMSGSKYIFESIGAKR 72
Query: 537 TLIINSVYGVDADEYVCRAVNKGGVKSTKAELII 570
TL I+ D Y C + EL +
Sbjct: 73 TLTISQCSLADDAAYQCVVGG----EKCSTELFV 102
Score = 74.7 bits (184), Expect = 5e-16
Identities = 21/94 (22%), Positives = 32/94 (34%), Gaps = 7/94 (7%)
Query: 2086 KAPEIIVPLRNANAIQ-NHNAQFQCTITGCPKPTISWLKGSREITPSARHHIF-AEGDTY 2143
K+ L A + H + + + WLK +EI S +IF + G
Sbjct: 14 KSTAFQKKLEPAYQVSKGHKIRLTVELAD-HDAEVKWLKNGQEIQMSGSKYIFESIGAKR 72
Query: 2144 TLIINSVYGVDADEYVCRAVNKGGVKSTKAELII 2177
TL I+ D Y C + EL +
Sbjct: 73 TLTISQCSLADDAAYQCVVGG----EKCSTELFV 102
Score = 54.7 bits (132), Expect = 5e-09
Identities = 17/92 (18%), Positives = 32/92 (34%), Gaps = 8/92 (8%)
Query: 579 PPRF----RDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVI-ESGGHFHVETSERHAI 633
F KG + + + ++ W ++ + I SG + E+
Sbjct: 15 STAFQKKLEPAYQVSKGHKIRLTVELAD-HDAEVKWLKNGQEIQMSGSKYIFESIGAKRT 73
Query: 634 LTIRDASNVDTAPYRVVAENDLGMDSAIVKIQ 665
LTI S D A Y+ V + S + ++
Sbjct: 74 LTISQCSLADDAAYQCVVGGEKC--STELFVK 103
Score = 41.6 bits (98), Expect = 2e-04
Identities = 17/95 (17%), Positives = 33/95 (34%), Gaps = 3/95 (3%)
Query: 172 AHTSSRVKIGTPPR-IDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQ-SDDR 229
H S + ++ A + +G ++ + A EV KNG+ +Q S +
Sbjct: 4 HHHHSSMDEKKSTAFQKKLEPAYQVSKGHKIRLTVELADHDA-EVKWLKNGQEIQMSGSK 62
Query: 230 FKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGS 264
+ F + + I + D Y + S
Sbjct: 63 YIFESIGAKRTLTISQCSLADDAAYQCVVGGEKCS 97
Score = 41.6 bits (98), Expect = 2e-04
Identities = 17/95 (17%), Positives = 33/95 (34%), Gaps = 3/95 (3%)
Query: 1779 AHTSSRVKIGTPPR-IDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQ-SDDR 1836
H S + ++ A + +G ++ + A EV KNG+ +Q S +
Sbjct: 4 HHHHSSMDEKKSTAFQKKLEPAYQVSKGHKIRLTVELADHDA-EVKWLKNGQEIQMSGSK 62
Query: 1837 FKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGS 1871
+ F + + I + D Y + S
Sbjct: 63 YIFESIGAKRTLTISQCSLADDAAYQCVVGGEKCS 97
Score = 35.8 bits (83), Expect = 0.021
Identities = 11/62 (17%), Positives = 19/62 (30%), Gaps = 1/62 (1%)
Query: 1433 TVKAGEDFSIHVPFMAFPQPAAFWFANDSIIDDSDTRVHKQLTMNSASLVVKNSQRSDGG 1492
V G + V +A W N I S ++ + +L + +D
Sbjct: 27 QVSKGHKIRLTVE-LADHDAEVKWLKNGQEIQMSGSKYIFESIGAKRTLTISQCSLADDA 85
Query: 1493 QY 1494
Y
Sbjct: 86 AY 87
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding,
phosphorylation, allosteric enzyme, alternative
splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A
{Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A*
1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Length = 297
Score = 83.5 bits (207), Expect = 3e-17
Identities = 25/81 (30%), Positives = 42/81 (51%)
Query: 820 DHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQLHHPKL 879
Y E+IG GA G V+ + TG A + + + +KELI EI +M + +P +
Sbjct: 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNI 79
Query: 880 INLHDAFEDDDEMVLIFEVLD 900
+N D++ DE+ ++ E L
Sbjct: 80 VNYLDSYLVGDELWVVMEYLA 100
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase,
nucleus, meiosis, mitosis, cytoplasm, metal-binding,
phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB:
2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A*
2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A*
4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Length = 279
Score = 83.1 bits (206), Expect = 4e-17
Identities = 21/81 (25%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 816 SSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSH--NLEKELIRKEIDIMNQ 873
S + Y++L IGTG++G + R + G I K + EK+++ E++++ +
Sbjct: 2 PSRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRE 61
Query: 874 LHHPKLINLHDAFEDDDEMVL 894
L HP ++ +D D L
Sbjct: 62 LKHPNIVRYYDRIIDRTNTTL 82
>3bfo_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1
(isoform 2); hydrolase, immunoglobulin domain, nucleus,
protease; 1.15A {Homo sapiens}
Length = 91
Score = 77.4 bits (191), Expect = 4e-17
Identities = 23/93 (24%), Positives = 33/93 (35%), Gaps = 10/93 (10%)
Query: 88 GEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFR 147
G K V + G L LQC A G+P+P +W +N ++ +
Sbjct: 1 GSKLQICVEPTSQKLMPGSTLVLQCVAVGSPIPHYQWFKNELPLTHETKK---------L 51
Query: 148 LHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKI 180
V G Y C YN S +V+I
Sbjct: 52 YMVPYVDLEHQGTYWCHVYNDRDSQ-DSKKVEI 83
Score = 77.4 bits (191), Expect = 4e-17
Identities = 23/93 (24%), Positives = 33/93 (35%), Gaps = 10/93 (10%)
Query: 1695 GEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFR 1754
G K V + G L LQC A G+P+P +W +N ++ +
Sbjct: 1 GSKLQICVEPTSQKLMPGSTLVLQCVAVGSPIPHYQWFKNELPLTHETKK---------L 51
Query: 1755 LHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKI 1787
V G Y C YN S +V+I
Sbjct: 52 YMVPYVDLEHQGTYWCHVYNDRDSQ-DSKKVEI 83
Score = 67.7 bits (166), Expect = 1e-13
Identities = 19/97 (19%), Positives = 27/97 (27%), Gaps = 10/97 (10%)
Query: 481 PEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLII 540
+I V + + QC G P P W K +T + ++
Sbjct: 4 LQICVEPTSQKLMPGSTLVLQCVAVGSPIPHYQWFKNELPLTHETKK---------LYMV 54
Query: 541 NSVYGVDADEYVCRAVNK-GGVKSTKAELIIMTAPKF 576
V Y C N S K E+II
Sbjct: 55 PYVDLEHQGTYWCHVYNDRDSQDSKKVEIIIDELNNL 91
Score = 67.7 bits (166), Expect = 1e-13
Identities = 19/97 (19%), Positives = 27/97 (27%), Gaps = 10/97 (10%)
Query: 2088 PEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLII 2147
+I V + + QC G P P W K +T + ++
Sbjct: 4 LQICVEPTSQKLMPGSTLVLQCVAVGSPIPHYQWFKNELPLTHETKK---------LYMV 54
Query: 2148 NSVYGVDADEYVCRAVNK-GGVKSTKAELIIMTAPKF 2183
V Y C N S K E+II
Sbjct: 55 PYVDLEHQGTYWCHVYNDRDSQDSKKVEIIIDELNNL 91
Score = 55.8 bits (135), Expect = 1e-09
Identities = 18/101 (17%), Positives = 33/101 (32%), Gaps = 13/101 (12%)
Query: 572 TAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSERH 631
+ + V P + G +V++ G P P W+++ + T E
Sbjct: 2 SKLQICVEPT---SQKLMPGSTLVLQCVAVGSPIPHYQWFKNELPL---------THETK 49
Query: 632 AILTIRDASNVDTAPYRVVAENDLGM-DSAIVKIQISDRPD 671
+ + Y ND DS V+I I + +
Sbjct: 50 KLYMVPYVDLEHQGTYWCHVYNDRDSQDSKKVEIIIDELNN 90
Score = 44.6 bits (106), Expect = 1e-05
Identities = 15/98 (15%), Positives = 31/98 (31%), Gaps = 12/98 (12%)
Query: 1135 PKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQTIY 1194
+I + + ++ G + G P P W N + T E + +Y
Sbjct: 4 LQICVEPT--SQKLMPGSTLVLQCVAVGSPIPHYQWFKNELPL---------THETKKLY 52
Query: 1195 RNKSAKRATDSGSYTIQLVNTVGSDSASCKVYVVDKPS 1232
G+Y + N S + ++D+ +
Sbjct: 53 MVPYVDLE-HQGTYWCHVYNDRDSQDSKKVEIIIDELN 89
Score = 44.6 bits (106), Expect = 1e-05
Identities = 16/98 (16%), Positives = 30/98 (30%), Gaps = 10/98 (10%)
Query: 181 GTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYII 240
G+ +I P + + G ++ G KN + + + +
Sbjct: 1 GSKLQICVEPTSQKLMPGSTLVLQCVAVGSPIPHYQWFKNELPLTHETKKLYM------- 53
Query: 241 IFIKEIRKEDAGDYTVNLSNSSGSV-SGTFTINITGLP 277
+ + E G Y ++ N S S I I L
Sbjct: 54 --VPYVDLEHQGTYWCHVYNDRDSQDSKKVEIIIDELN 89
Score = 44.6 bits (106), Expect = 1e-05
Identities = 16/98 (16%), Positives = 30/98 (30%), Gaps = 10/98 (10%)
Query: 1788 GTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYII 1847
G+ +I P + + G ++ G KN + + + +
Sbjct: 1 GSKLQICVEPTSQKLMPGSTLVLQCVAVGSPIPHYQWFKNELPLTHETKKLYM------- 53
Query: 1848 IFIKEIRKEDAGDYTVNLSNSSGSV-SGTFTINITGLP 1884
+ + E G Y ++ N S S I I L
Sbjct: 54 --VPYVDLEHQGTYWCHVYNDRDSQDSKKVEIIIDELN 89
Score = 38.9 bits (91), Expect = 0.001
Identities = 13/99 (13%), Positives = 24/99 (24%), Gaps = 21/99 (21%)
Query: 1410 SGPVIVEEQPNKPVMDLSGVRDITVKAGEDFSIHVPFMAFPQPAAFWFANDSIIDDSDTR 1469
S I +P + G + + P P WF N+ + +
Sbjct: 2 SKLQICV-EP----------TSQKLMPGSTLVLQCVAVGSPIPHYQWFKNELPLTHETKK 50
Query: 1470 VHKQLTMNSASLVVKNSQRSDGGQYRLQLKNPAGFDTAT 1508
+ +V G Y + N +
Sbjct: 51 L----------YMVPYVDLEHQGTYWCHVYNDRDSQDSK 79
>2ens_A Advanced glycosylation END product-specific receptor;
beta-sandwich, C2-SET, structural genomics, NPPSFA; NMR
{Homo sapiens}
Length = 96
Score = 77.5 bits (191), Expect = 4e-17
Identities = 24/92 (26%), Positives = 36/92 (39%), Gaps = 9/92 (9%)
Query: 89 EKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRL 148
E+ +V + V G +TL CE P P+ W+++G + V L
Sbjct: 9 EEVQLVVEPEGGAVAPGGTVTLTCEVPAQPSPQIHWMKDGVPLPL-------PPSPV--L 59
Query: 149 HFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKI 180
E+ D G Y+C A +S S V I
Sbjct: 60 ILPEIGPQDQGTYSCVATHSSHGPQESRAVSI 91
Score = 77.5 bits (191), Expect = 4e-17
Identities = 24/92 (26%), Positives = 36/92 (39%), Gaps = 9/92 (9%)
Query: 1696 EKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRL 1755
E+ +V + V G +TL CE P P+ W+++G + V L
Sbjct: 9 EEVQLVVEPEGGAVAPGGTVTLTCEVPAQPSPQIHWMKDGVPLPL-------PPSPV--L 59
Query: 1756 HFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKI 1787
E+ D G Y+C A +S S V I
Sbjct: 60 ILPEIGPQDQGTYSCVATHSSHGPQESRAVSI 91
Score = 67.4 bits (165), Expect = 1e-13
Identities = 14/97 (14%), Positives = 25/97 (25%), Gaps = 9/97 (9%)
Query: 474 DPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEG 533
+ +++V C + P P I W+K +
Sbjct: 4 GSSGLEEVQLVVEPEGGAVAPGGTVTLTCEVPAQPSPQIHWMKDGVPLPLPPSP------ 57
Query: 534 DTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELII 570
LI+ + D Y C A + + I
Sbjct: 58 ---VLILPEIGPQDQGTYSCVATHSSHGPQESRAVSI 91
Score = 67.4 bits (165), Expect = 1e-13
Identities = 14/97 (14%), Positives = 25/97 (25%), Gaps = 9/97 (9%)
Query: 2081 DPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEG 2140
+ +++V C + P P I W+K +
Sbjct: 4 GSSGLEEVQLVVEPEGGAVAPGGTVTLTCEVPAQPSPQIHWMKDGVPLPLPPSP------ 57
Query: 2141 DTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELII 2177
LI+ + D Y C A + + I
Sbjct: 58 ---VLILPEIGPQDQGTYSCVATHSSHGPQESRAVSI 91
Score = 50.1 bits (120), Expect = 2e-07
Identities = 18/103 (17%), Positives = 30/103 (29%), Gaps = 14/103 (13%)
Query: 566 AELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHV 625
+ + + V P G V + P P+I W +D +
Sbjct: 3 SGSSGLEEVQLVVEPE---GGAVAPGGTVTLTCEVPAQPSPQIHWMKDGVPLPLPP---- 55
Query: 626 ETSERHAILTIRDASNVDTAPYRVVAENDLGM--DSAIVKIQI 666
+L + + D Y VA + +S V I I
Sbjct: 56 -----SPVLILPEIGPQDQGTYSCVATHSSHGPQESRAVSISI 93
Score = 43.6 bits (103), Expect = 4e-05
Identities = 13/95 (13%), Positives = 26/95 (27%), Gaps = 12/95 (12%)
Query: 1134 APKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQTI 1193
++ + V G T+T +P P W +G + +
Sbjct: 10 EVQLVVEP--EGGAVAPGGTVTLTCEVPAQPSPQIHWMKDGVPLPLPPSPVL------IL 61
Query: 1194 YRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYVV 1228
D G+Y+ ++ S V +
Sbjct: 62 ----PEIGPQDQGTYSCVATHSSHGPQESRAVSIS 92
Score = 39.3 bits (92), Expect = 0.001
Identities = 11/79 (13%), Positives = 20/79 (25%), Gaps = 10/79 (12%)
Query: 1430 RDITVKAGEDFSIHVPFMAFPQPAAFWFANDSIIDDSDTRVHKQLTMNSASLVVKNSQRS 1489
V G ++ A P P W + + S L++
Sbjct: 18 EGGAVAPGGTVTLTCEVPAQPSPQIHWMKDGVPLPLP----------PSPVLILPEIGPQ 67
Query: 1490 DGGQYRLQLKNPAGFDTAT 1508
D G Y + + +
Sbjct: 68 DQGTYSCVATHSSHGPQES 86
Score = 37.4 bits (87), Expect = 0.006
Identities = 14/92 (15%), Positives = 31/92 (33%), Gaps = 9/92 (9%)
Query: 183 PPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIF 242
++ P + G + ++ K+G + VL
Sbjct: 10 EVQLVVEPEGGAVAPGGTVTLTCEVPAQPSPQIHWMKDGVPLPLPPS---PVL------I 60
Query: 243 IKEIRKEDAGDYTVNLSNSSGSVSGTFTINIT 274
+ EI +D G Y+ ++SS + ++I+
Sbjct: 61 LPEIGPQDQGTYSCVATHSSHGPQESRAVSIS 92
Score = 37.4 bits (87), Expect = 0.006
Identities = 14/92 (15%), Positives = 31/92 (33%), Gaps = 9/92 (9%)
Query: 1790 PPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIF 1849
++ P + G + ++ K+G + VL
Sbjct: 10 EVQLVVEPEGGAVAPGGTVTLTCEVPAQPSPQIHWMKDGVPLPLPPS---PVL------I 60
Query: 1850 IKEIRKEDAGDYTVNLSNSSGSVSGTFTINIT 1881
+ EI +D G Y+ ++SS + ++I+
Sbjct: 61 LPEIGPQDQGTYSCVATHSSHGPQESRAVSIS 92
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism,
metal-binding, cell cycle kinase, mitosis, cytoplasm,
magnesium, transferase; 2.10A {Homo sapiens} PDB:
2wqn_A*
Length = 310
Score = 83.5 bits (207), Expect = 5e-17
Identities = 23/93 (24%), Positives = 44/93 (47%), Gaps = 3/93 (3%)
Query: 808 PQPVDIKTSSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNL---EKELI 864
+ ++ I ++IG G F V+R G A K + + + +
Sbjct: 20 KALRPDMGYNTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADC 79
Query: 865 RKEIDIMNQLHHPKLINLHDAFEDDDEMVLIFE 897
KEID++ QL+HP +I + +F +D+E+ ++ E
Sbjct: 80 IKEIDLLKQLNHPNVIKYYASFIEDNELNIVLE 112
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding,
transferase, nucleotide-binding; HET: SEP; 1.6A {Homo
sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A*
2bva_A*
Length = 321
Score = 83.6 bits (207), Expect = 5e-17
Identities = 20/81 (24%), Positives = 40/81 (49%)
Query: 820 DHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQLHHPKL 879
D +IG G+ G+V RE+ +G A K + + +EL+ E+ IM H +
Sbjct: 45 LLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNV 104
Query: 880 INLHDAFEDDDEMVLIFEVLD 900
+ ++ ++ +E+ ++ E L
Sbjct: 105 VEMYKSYLVGEELWVLMEFLQ 125
>1x5z_A Receptor-type tyrosine-protein phosphatase delta; fibronectin type
III domain containing protein, structural genomics,
NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Length = 115
Score = 77.8 bits (192), Expect = 5e-17
Identities = 22/111 (19%), Positives = 37/111 (33%), Gaps = 4/111 (3%)
Query: 656 GMDSAIVKIQIS-DRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMS 714
S +++ P P E S+ L W P I NY + ++
Sbjct: 3 SGSSGDIQVITQTGVPGQPLNFKAEPESETSILLSWTPPR---SDTIANYELVYKDGEHG 59
Query: 715 SWIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKDT 765
R+ T+ + GL P Y FR+ A + G + T + +
Sbjct: 60 EEQRITIEPGTSYRLQGLKPNSLYYFRLAARSPQGLGASTAEISARTMQSS 110
Score = 73.5 bits (181), Expect = 2e-15
Identities = 26/103 (25%), Positives = 41/103 (39%), Gaps = 8/103 (7%)
Query: 1217 GSDSASCKVYVV---DKPSPPQGPLDVSDITPESCSLSWKPPLDDGGSPITNYVVEKYES 1273
GS +S + V+ P P + S LSW PP D I NY + +
Sbjct: 1 GSSGSSGDIQVITQTGVPGQPLN-FKAEPESETSILLSWTPPRSD---TIANYELVYKDG 56
Query: 1274 ATGFWSKLSSFVRSPAYDVFGLETNRQYRFRVRAENQYGVSEP 1316
G +++ +Y + GL+ N Y FR+ A + G+
Sbjct: 57 EHGEEQRIT-IEPGTSYRLQGLKPNSLYYFRLAARSPQGLGAS 98
Score = 70.1 bits (172), Expect = 3e-14
Identities = 25/87 (28%), Positives = 38/87 (43%), Gaps = 4/87 (4%)
Query: 900 DRPHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTKVSSYVTTPF 959
P P N A+ + S+ L WTPPR + I NY + KD +++ T +
Sbjct: 16 GVPGQPLNFKAEPESETSILLSWTPPR-SDT--IANYELVYKDGEHGEEQRITIEPGTSY 72
Query: 960 VRVRNLAIGSTYEFRVMAENQYGLSKP 986
++ L S Y FR+ A + GL
Sbjct: 73 R-LQGLKPNSLYYFRLAARSPQGLGAS 98
Score = 68.9 bits (169), Expect = 7e-14
Identities = 28/130 (21%), Positives = 41/130 (31%), Gaps = 37/130 (28%)
Query: 991 DPIKAKHPFDVPGAPGAPKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIK 1050
I+ VPG P K +E SI L W+ PR D I Y + + + +
Sbjct: 7 GDIQVITQTGVPGQPLNFKAEPESETSILLSWTPPRSD---TIANYELVYKDGEHGEEQR 63
Query: 1051 ASMAHIPDTSLKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCA 1110
++ P TS R+ L N Y FR+ A
Sbjct: 64 ITIE--PGTSY--------------------------------RLQGLKPNSLYYFRLAA 89
Query: 1111 VNAAGQGPWS 1120
+ G G +
Sbjct: 90 RSPQGLGAST 99
Score = 68.5 bits (168), Expect = 1e-13
Identities = 20/107 (18%), Positives = 33/107 (30%), Gaps = 8/107 (7%)
Query: 358 GMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKH 417
G I+ + P P + LSW P D I Y +
Sbjct: 1 GSSGSSG---DIQVITQTGVPGQPLNFKAEPESETSILLSWTPPRSD---TIANYELVYK 54
Query: 418 EVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPS 464
+ QR+ + + + L Y FR+ A++ GL +
Sbjct: 55 DGEHGEEQRITIE--PGTSYRLQGLKPNSLYYFRLAARSPQGLGAST 99
Score = 68.5 bits (168), Expect = 1e-13
Identities = 20/107 (18%), Positives = 33/107 (30%), Gaps = 8/107 (7%)
Query: 1965 GMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKH 2024
G I+ + P P + LSW P D I Y +
Sbjct: 1 GSSGSSG---DIQVITQTGVPGQPLNFKAEPESETSILLSWTPPRSD---TIANYELVYK 54
Query: 2025 EVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPS 2071
+ QR+ + + + L Y FR+ A++ GL +
Sbjct: 55 DGEHGEEQRITIE--PGTSYRLQGLKPNSLYYFRLAARSPQGLGAST 99
Score = 66.6 bits (163), Expect = 4e-13
Identities = 24/108 (22%), Positives = 43/108 (39%), Gaps = 8/108 (7%)
Query: 275 GLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHDT 334
G+PG P+ ++ + L W PP+ D + +Y + +D I+ T
Sbjct: 16 GVPGQPLN-FKAEPESETSILLSWTPPRSD---TIANYELVYKDGEHGEEQRITIE-PGT 70
Query: 335 TFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPG 382
++ +QGL Y F + A + G+G I A++ G
Sbjct: 71 SYRLQGLKPNSLYYFRLAARSPQGLGAS---TAEISARTMQSSGPSSG 115
Score = 66.6 bits (163), Expect = 4e-13
Identities = 24/108 (22%), Positives = 43/108 (39%), Gaps = 8/108 (7%)
Query: 1882 GLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHDT 1941
G+PG P+ ++ + L W PP+ D + +Y + +D I+ T
Sbjct: 16 GVPGQPLN-FKAEPESETSILLSWTPPRSD---TIANYELVYKDGEHGEEQRITIE-PGT 70
Query: 1942 TFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPG 1989
++ +QGL Y F + A + G+G I A++ G
Sbjct: 71 SYRLQGLKPNSLYYFRLAARSPQGLGAS---TAEISARTMQSSGPSSG 115
Score = 39.2 bits (92), Expect = 0.002
Identities = 21/133 (15%), Positives = 35/133 (26%), Gaps = 53/133 (39%)
Query: 1557 KGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVS 1616
K +E SI L W+ PR D I Y + + + + ++ P T
Sbjct: 25 KAEPESETSILLSWTPPRSD---TIANYELVYKDGEHGEEQRITIE--PGT--------- 70
Query: 1617 EGKSIGSERGSTAQFLEREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIG 1676
S+ + L + Y FR+ A + G
Sbjct: 71 ------------------------------------SYRLQGLKPNSLYYFRLAARSPQG 94
Query: 1677 KSEPS---ICTTP 1686
+ T
Sbjct: 95 LGASTAEISARTM 107
Score = 36.2 bits (84), Expect = 0.022
Identities = 9/61 (14%), Positives = 19/61 (31%), Gaps = 5/61 (8%)
Query: 22 YIIERREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPS---ICTT 78
Y + ++ + S+ + L + Y FR+ A + G + T
Sbjct: 49 YELVYKDGEHGEEQRITIEPGT--SYRLQGLKPNSLYYFRLAARSPQGLGASTAEISART 106
Query: 79 P 79
Sbjct: 107 M 107
Score = 33.1 bits (76), Expect = 0.29
Identities = 15/72 (20%), Positives = 23/72 (31%), Gaps = 7/72 (9%)
Query: 1322 SITAKFPFTVPDPPGQPQIVDWDTNNATLMWDRPRTDGGSKIQGYKMLLKTPTGELPTTI 1381
I VP P + + L W PR+D I Y+++ K +
Sbjct: 8 DIQVITQTGVPGQPLNFKAEPESETSILLSWTPPRSD---TIANYELVYK----DGEHGE 60
Query: 1382 WSKIRPTSSTVY 1393
+I T Y
Sbjct: 61 EQRITIEPGTSY 72
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin
superfamily, integrin-binding, cell adhesion protein;
1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A
1vsc_A
Length = 202
Score = 80.6 bits (198), Expect = 6e-17
Identities = 31/189 (16%), Positives = 60/189 (31%), Gaps = 13/189 (6%)
Query: 484 IVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSV 543
P A + C+ TGC P SW + EG T TL +N V
Sbjct: 5 TTPESRYLAQIGDSVSLTCSTTGCESPFFSWRTQIDS---PLNGKVTNEGTTSTLTMNPV 61
Query: 544 YGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTG- 602
+ Y+C A + ++ I + PK + + G+ + VK
Sbjct: 62 SFGNEHSYLCTATCESRKLEKGIQVEIYSFPKDPEIHL---SGPLEAGKPITVKCSVADV 118
Query: 603 YPKPK--ITWYRDNEVIESGGHFHVETSE----RHAILTIRDASNVDTAPYRVVAENDLG 656
YP + I + + +++S + + +T A+ +
Sbjct: 119 YPFDRLEIDLLKGDHLMKSQEFLEDADRKSLETKSLEVTFTPVIEDIGKVLVCRAKLHID 178
Query: 657 MDSAIVKIQ 665
++ ++
Sbjct: 179 EMDSVPTVR 187
Score = 76.3 bits (187), Expect = 2e-15
Identities = 29/169 (17%), Positives = 56/169 (33%), Gaps = 10/169 (5%)
Query: 94 IVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEV 153
P + +G ++L C TG P W +G +V G L N V
Sbjct: 5 TTPESRYLAQIGDSVSLTCSTTGCESPFFSWRTQIDSPLNG---KVTNEGTTSTLTMNPV 61
Query: 154 TDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQP- 212
+ + Y C A +V+I + P+ + + + G VK A P
Sbjct: 62 SFGNEHSYLCTATCESRKLEKGIQVEIYSFPKDPEIHLSGPLEAGKPITVKCSVADVYPF 121
Query: 213 --MEVSLTKNGRVVQSDDRFKFTVLDDY----IIIFIKEIRKEDAGDYT 255
+E+ L K +++S + + + + + ++
Sbjct: 122 DRLEIDLLKGDHLMKSQEFLEDADRKSLETKSLEVTFTPVIEDIGKVLV 170
Score = 76.3 bits (187), Expect = 2e-15
Identities = 29/169 (17%), Positives = 56/169 (33%), Gaps = 10/169 (5%)
Query: 1701 IVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEV 1760
P + +G ++L C TG P W +G +V G L N V
Sbjct: 5 TTPESRYLAQIGDSVSLTCSTTGCESPFFSWRTQIDSPLNG---KVTNEGTTSTLTMNPV 61
Query: 1761 TDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQP- 1819
+ + Y C A +V+I + P+ + + + G VK A P
Sbjct: 62 SFGNEHSYLCTATCESRKLEKGIQVEIYSFPKDPEIHLSGPLEAGKPITVKCSVADVYPF 121
Query: 1820 --MEVSLTKNGRVVQSDDRFKFTVLDDY----IIIFIKEIRKEDAGDYT 1862
+E+ L K +++S + + + + + ++
Sbjct: 122 DRLEIDLLKGDHLMKSQEFLEDADRKSLETKSLEVTFTPVIEDIGKVLV 170
Score = 58.6 bits (141), Expect = 2e-09
Identities = 25/114 (21%), Positives = 36/114 (31%), Gaps = 5/114 (4%)
Query: 2091 IVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSV 2150
P A + C+ TGC P SW + EG T TL +N V
Sbjct: 5 TTPESRYLAQIGDSVSLTCSTTGCESPFFSWRTQIDS---PLNGKVTNEGTTSTLTMNPV 61
Query: 2151 YGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPRFRDTAYFESDVVVVVC 2204
+ Y+C A + ++ I + PK P + V C
Sbjct: 62 SFGNEHSYLCTATCESRKLEKGIQVEIYSFPKD--PEIHLSGPLEAGKPITVKC 113
Score = 50.9 bits (121), Expect = 9e-07
Identities = 24/156 (15%), Positives = 46/156 (29%), Gaps = 22/156 (14%)
Query: 2042 SQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQ 2101
S + + + G ++ + A E+ +Q++ K PEI + +
Sbjct: 54 STLTMNPVSFGNEHSYLCTATCESR-----KLEKGIQVEIYSFPKDPEIHL---SGPLEA 105
Query: 2102 NHNAQFQCTITGC---PKPTISWLKGSREITPSARHHIFAEGD----TYTLIINSVYGVD 2154
+C++ + I LKG + + + V
Sbjct: 106 GKPITVKCSVADVYPFDRLEIDLLKGDHLMKSQEFLEDADRKSLETKSLEVTFTPVIEDI 165
Query: 2155 ADEYVCRAVNKGG-------VKSTKAELIIMTAPKF 2183
VCRA V+ EL + +PK
Sbjct: 166 GKVLVCRAKLHIDEMDSVPTVRQAVKELQVYISPKN 201
Score = 49.0 bits (116), Expect = 4e-06
Identities = 20/156 (12%), Positives = 43/156 (27%), Gaps = 22/156 (14%)
Query: 45 CSFSVLNLVEGNDYEFRIIAVNAIGKSEPSICTTPVKICEFVGGEKPDFIVPLKDLVVPL 104
+ ++ + GN++ + A K E I + D + L +
Sbjct: 54 STLTMNPVSFGNEHSYLCTATCESRKLEKGIQVE-------IYSFPKDPEIHLSGPLEA- 105
Query: 105 GKLLTLQCEATGT-PVPKC--RWLRNGREISSGARYRVETAG----GVFRLHFNEVTDVD 157
GK +T++C P + L+ + S + F V +
Sbjct: 106 GKPITVKCSVADVYPFDRLEIDLLKGDHLMKSQEFLEDADRKSLETKSLEVTFTPVIEDI 165
Query: 158 NGDYTCEAYNSVG-------FAHTSSRVKIGTPPRI 186
C A + +++ P+
Sbjct: 166 GKVLVCRAKLHIDEMDSVPTVRQAVKELQVYISPKN 201
Score = 49.0 bits (116), Expect = 4e-06
Identities = 20/156 (12%), Positives = 43/156 (27%), Gaps = 22/156 (14%)
Query: 1652 CSFSVLNLVEGNDYEFRIIAVNAIGKSEPSICTTPVKICEFVGGEKPDFIVPLKDLVVPL 1711
+ ++ + GN++ + A K E I + D + L +
Sbjct: 54 STLTMNPVSFGNEHSYLCTATCESRKLEKGIQVE-------IYSFPKDPEIHLSGPLEA- 105
Query: 1712 GKLLTLQCEATGT-PVPKC--RWLRNGREISSGARYRVETAG----GVFRLHFNEVTDVD 1764
GK +T++C P + L+ + S + F V +
Sbjct: 106 GKPITVKCSVADVYPFDRLEIDLLKGDHLMKSQEFLEDADRKSLETKSLEVTFTPVIEDI 165
Query: 1765 NGDYTCEAYNSVG-------FAHTSSRVKIGTPPRI 1793
C A + +++ P+
Sbjct: 166 GKVLVCRAKLHIDEMDSVPTVRQAVKELQVYISPKN 201
Score = 42.5 bits (99), Expect = 6e-04
Identities = 13/96 (13%), Positives = 27/96 (28%), Gaps = 4/96 (4%)
Query: 1146 MTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQTIYRNKSAKRATDS 1205
G+ ++T +G P W + +G++ E + + +
Sbjct: 11 YLAQIGDSVSLTCSTTGCESPFFSWR-TQIDSPLNGKVTNEGTTSTLTMNP---VSFGNE 66
Query: 1206 GSYTIQLVNTVGSDSASCKVYVVDKPSPPQGPLDVS 1241
SY +V + P P+ L
Sbjct: 67 HSYLCTATCESRKLEKGIQVEIYSFPKDPEIHLSGP 102
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation,
transferase-transferas inhibitor complex; HET: BX7;
2.60A {Homo sapiens}
Length = 396
Score = 84.5 bits (209), Expect = 7e-17
Identities = 23/85 (27%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
Query: 816 SSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEK-ELIRKEIDIMNQL 874
S+ + + + +G GA V R R +KTG++FA K L ++ +E +++ +L
Sbjct: 5 STSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKL 64
Query: 875 HHPKLINLHDAFEDD--DEMVLIFE 897
+H ++ L E+ VLI E
Sbjct: 65 NHKNIVKLFAIEEETTTRHKVLIME 89
>2w1n_A O-GLCNACASE NAGJ; hexosaminidase, glycoside hydrolase, fibronectin
type-III, beta-N-acetylglucosaminidase, cohesin,
hydrolase; 1.80A {Clostridium perfringens}
Length = 238
Score = 81.1 bits (199), Expect = 8e-17
Identities = 29/236 (12%), Positives = 67/236 (28%), Gaps = 18/236 (7%)
Query: 1093 NRVTSLIENHEYEFRVCAVNAAGQGPWSSSSDIIMCCAPPCAPKITS--DLSIRDMTVLA 1150
+ + E V ++ + + S + + +
Sbjct: 19 EALEEVQVGENIEVGVGIDELVNAEAFAYDFTLNYDENAFEYVEAISDDGVFVNAKKIED 78
Query: 1151 GEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQTIYRNKSAKRATDSGSYTI 1210
G+ + +G P P EV ++ E + ++ G
Sbjct: 79 GKVRVLVSSLTGEPLP-------AKEVLAKVVLRAEAKTEGSNLSVTNSSVGDGEG-LVH 130
Query: 1211 QLVNTVGSDSASCKVYVVDKPSPPQGPLDVSDITPESCSLSWKPPLDDGGSPITNYVVEK 1270
++ T + + +P + S+I ++ +++W P G + Y++ K
Sbjct: 131 EIAGTEKTVNIIEGTSPEIVVNPVR-DFKASEINKKNVTVTWTEPETTEG--LEGYILYK 187
Query: 1271 YESATGFWSKLSSFVRSPAYDVFGLETNRQYRFRVRAENQYGVSEPLELDNSITAK 1326
+Y L + Y F++ A+ G E TA+
Sbjct: 188 DGKKVAEIG-----KDETSYTFKKLNRHTIYNFKIAAKYSNGEVSSKESLTLRTAR 238
Score = 74.2 bits (181), Expect = 2e-14
Identities = 34/237 (14%), Positives = 71/237 (29%), Gaps = 11/237 (4%)
Query: 531 AEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPRFRDTAYFDK 590
A T ++ + ++ V E + V + + +A T ++ A D
Sbjct: 9 AAEVTGSVSLEALEEVQVGENIEVGVGIDELVNAEAFAYDFTL-NYDENAFEYVEAISDD 67
Query: 591 GENVVVKIPFTGYPKPKITWYRDNEVIESGG----HFHVETSERHAILTIRDASNVDTAP 646
G V K G + ++ + E + L++ ++S D
Sbjct: 68 GVFVNAKKIEDGKVRVLVSSLTGEPLPAKEVLAKVVLRAEAKTEGSNLSVTNSSVGDGEG 127
Query: 647 YRVVAENDLGMDSAIVKIQISDRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIV 706
+ I +P + +I ++ + W P G + YI+
Sbjct: 128 LVHEIAGTEKTVNIIEGTSPEIVVNPVRDFKASEINKKNVTVTWTEPETTEG--LEGYIL 185
Query: 707 EKREHPMSSWIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTK 763
K + T+ L+ Y F++ A+ G + L T +
Sbjct: 186 YKDG----KKVAEIGKDETSYTFKKLNRHTIYNFKIAAKYSNGEVSSKESLTLRTAR 238
Score = 71.9 bits (175), Expect = 1e-13
Identities = 30/236 (12%), Positives = 69/236 (29%), Gaps = 18/236 (7%)
Query: 141 TAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHT----SSRVKIGTPPRIDRMPNALYIP 196
+ + + E +V G + + T + + D +
Sbjct: 17 SLEALEEVQVGENIEVGVGIDELVNAEAFAYDFTLNYDENAFEYVEAISDDGVFVNAKKI 76
Query: 197 EGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTV 256
E +V + +P L + + + + + + D
Sbjct: 77 EDGKVRVLVSSLTGEP----LPAKEVLAKV--VLRAEAKTEGSNLSVTNSSVGDGEGLVH 130
Query: 257 NLSNSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVER 316
++ + +V+ + + P SEI K T+ W P+ G + Y++ +
Sbjct: 131 EIAGTEKTVNIIEGTSPEIVVNPVR-DFKASEINKKNVTVTWTEPETTEG--LEGYILYK 187
Query: 317 RDISMPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAK 372
+ +T++ + L Y F + A NG E + A+
Sbjct: 188 DGKKV-----AEIGKDETSYTFKKLNRHTIYNFKIAAKYSNGEVSSKESLTLRTAR 238
Score = 71.9 bits (175), Expect = 1e-13
Identities = 30/236 (12%), Positives = 69/236 (29%), Gaps = 18/236 (7%)
Query: 1748 TAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHT----SSRVKIGTPPRIDRMPNALYIP 1803
+ + + E +V G + + T + + D +
Sbjct: 17 SLEALEEVQVGENIEVGVGIDELVNAEAFAYDFTLNYDENAFEYVEAISDDGVFVNAKKI 76
Query: 1804 EGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTV 1863
E +V + +P L + + + + + + D
Sbjct: 77 EDGKVRVLVSSLTGEP----LPAKEVLAKV--VLRAEAKTEGSNLSVTNSSVGDGEGLVH 130
Query: 1864 NLSNSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVER 1923
++ + +V+ + + P SEI K T+ W P+ G + Y++ +
Sbjct: 131 EIAGTEKTVNIIEGTSPEIVVNPVR-DFKASEINKKNVTVTWTEPETTEG--LEGYILYK 187
Query: 1924 RDISMPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAK 1979
+ +T++ + L Y F + A NG E + A+
Sbjct: 188 DGKKV-----AEIGKDETSYTFKKLNRHTIYNFKIAAKYSNGEVSSKESLTLRTAR 238
Score = 65.3 bits (158), Expect = 2e-11
Identities = 31/217 (14%), Positives = 66/217 (30%), Gaps = 23/217 (10%)
Query: 268 TFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWIC- 326
+ I L D + + + D G+ V +E + +
Sbjct: 31 EVGVGIDELVNAEAFAYDFT-LNYDENAFEYVEAISDDGVFVNAKKIEDGKVRVLVSSLT 89
Query: 327 -----ISTTCHDTTFIVQGLTEGQEYLFHVMAV-----NENGMGPPLEGINPIKAKSPYD 376
+ TEG +V + + + +N I+ SP
Sbjct: 90 GEPLPAKEVLAKVVLRAEAKTEGSNLSVTNSSVGDGEGLVHEIAGTEKTVNIIEGTSPEI 149
Query: 377 KPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQ 436
+P +++ V ++W +P G ++GY + K ++V +
Sbjct: 150 VVNPVRDFKASEINKKNVTVTWTEPETTEG--LEGYILYKD------GKKVAEIGKDETS 201
Query: 437 INIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIK 473
L Y F++ A+ G S+ S+ ++
Sbjct: 202 YTFKKLNRHTIYNFKIAAKYSNG---EVSSKESLTLR 235
Score = 65.3 bits (158), Expect = 2e-11
Identities = 31/217 (14%), Positives = 66/217 (30%), Gaps = 23/217 (10%)
Query: 1875 TFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWIC- 1933
+ I L D + + + D G+ V +E + +
Sbjct: 31 EVGVGIDELVNAEAFAYDFT-LNYDENAFEYVEAISDDGVFVNAKKIEDGKVRVLVSSLT 89
Query: 1934 -----ISTTCHDTTFIVQGLTEGQEYLFHVMAV-----NENGMGPPLEGINPIKAKSPYD 1983
+ TEG +V + + + +N I+ SP
Sbjct: 90 GEPLPAKEVLAKVVLRAEAKTEGSNLSVTNSSVGDGEGLVHEIAGTEKTVNIIEGTSPEI 149
Query: 1984 KPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQ 2043
+P +++ V ++W +P G ++GY + K ++V +
Sbjct: 150 VVNPVRDFKASEINKKNVTVTWTEPETTEG--LEGYILYKD------GKKVAEIGKDETS 201
Query: 2044 INIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIK 2080
L Y F++ A+ G S+ S+ ++
Sbjct: 202 YTFKKLNRHTIYNFKIAAKYSNG---EVSSKESLTLR 235
Score = 59.9 bits (144), Expect = 1e-09
Identities = 28/206 (13%), Positives = 64/206 (31%), Gaps = 15/206 (7%)
Query: 790 EKVSDYDQYVFDIYSKYVPQPVDIKTSSVYDHYDILE---EIGTGAFGVVHRCRERKTGN 846
+++ + + + +D Y + + D + E G V E
Sbjct: 37 DELVNAEAFAYDFTLNYDENAFEYVEAISDDGVFVNAKKIEDGKVRVLVSSLTGEPLPAK 96
Query: 847 IFAAKFIPVSHNLEKELIRKEIDIMNQLHHPKLINLHDAF--EDDDEMVLIFEVLDRPHP 904
V E + + + N +H+ E ++ +P
Sbjct: 97 ---EVLAKVVLRAEAKTEGSNLSVTNSSVGDGEGLVHEIAGTEKTVNIIEGTSPEIVVNP 153
Query: 905 PENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTKVSSYVTTPFVRVRN 964
+ A E ++T+ WT P G + Y++ K + ++ T+ +
Sbjct: 154 VRDFKASEINKKNVTVTWTEPETTEG--LEGYILYK---DGKKVAEIGKDETS--YTFKK 206
Query: 965 LAIGSTYEFRVMAENQYGLSKPALTI 990
L + Y F++ A+ G ++
Sbjct: 207 LNRHTIYNFKIAAKYSNGEVSSKESL 232
Score = 56.5 bits (135), Expect = 2e-08
Identities = 29/218 (13%), Positives = 60/218 (27%), Gaps = 51/218 (23%)
Query: 916 DSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTKV------SSYVTTPFVRVRNLAIGS 969
D + + G + +E V + + +R GS
Sbjct: 54 DENAFEYVEAISDDGVFVNAKKIEDGKVRVLVSSLTGEPLPAKEVLAKVVLRAEAKTEGS 113
Query: 970 TYEFRVMA-----ENQYGLSKPALTIDPIKAKHPFDVPGAPGAPKGVDSTEDSISLVWSK 1024
+ + ++ T++ I+ P V K + + ++++ W++
Sbjct: 114 NLSVTNSSVGDGEGLVHEIAGTEKTVNIIEGTSPEIVVNPVRDFKASEINKKNVTVTWTE 173
Query: 1025 PRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEGKSIGSERGSTAQFL 1084
P G ++ YI+ K D K + A I Y
Sbjct: 174 PETTEG--LEGYILYK----DGKKV----AEIGKDETSYT-------------------- 203
Query: 1085 ELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPWSSS 1122
L + Y F++ A + G+ S
Sbjct: 204 ----------FKKLNRHTIYNFKIAAKYSNGEVSSKES 231
Score = 40.3 bits (93), Expect = 0.004
Identities = 26/224 (11%), Positives = 66/224 (29%), Gaps = 21/224 (9%)
Query: 1202 ATDSGSYTIQLVNTVGSDSASCKVYVVDKPSPPQGPLDVSDITPESCSLSWKPPLDDGGS 1261
A +GS +++ + V +D+ + + + + + + D G
Sbjct: 10 AEVTGSVSLEALEEVQVGENIEVGVGIDELVNAEAFAYDFTLNYDENAFEYVEAISDDGV 69
Query: 1262 PITNYVVEKYESATGFWSKLSSFVRSPA------YDVFGLETNRQYRFRVRA-----ENQ 1310
+ +E + S + + +
Sbjct: 70 FVNAKKIEDGKVRVLVSSLTGEPLPAKEVLAKVVLRAEAKTEGSNLSVTNSSVGDGEGLV 129
Query: 1311 YGVSEPLELDNSITAKFPFTVPDPPGQPQIVDWDTNNATLMWDRPRTDGGSKIQGYKM-- 1368
+ ++ + N I P V +P + + + N T+ W P T G ++GY +
Sbjct: 130 HEIAGTEKTVNIIEGTSPEIVVNPVRDFKASEINKKNVTVTWTEPETTEG--LEGYILYK 187
Query: 1369 ---LLKTPTGELPTTIWSKIRPTSS---TVYCKDTTMNSSNSEP 1406
+ + + + K+ + + K + S+ E
Sbjct: 188 DGKKVAEIGKDETSYTFKKLNRHTIYNFKIAAKYSNGEVSSKES 231
Score = 34.9 bits (79), Expect = 0.21
Identities = 7/29 (24%), Positives = 12/29 (41%)
Query: 46 SFSVLNLVEGNDYEFRIIAVNAIGKSEPS 74
S++ L Y F+I A + G+
Sbjct: 201 SYTFKKLNRHTIYNFKIAAKYSNGEVSSK 229
Score = 34.9 bits (79), Expect = 0.21
Identities = 7/29 (24%), Positives = 12/29 (41%)
Query: 1653 SFSVLNLVEGNDYEFRIIAVNAIGKSEPS 1681
S++ L Y F+I A + G+
Sbjct: 201 SYTFKKLNRHTIYNFKIAAKYSNGEVSSK 229
>2a19_B Interferon-induced, double-stranded RNA-activated kinase;
transferase, protein biosynthesis, protein synthesis
transferase complex; HET: TPO ANP; 2.50A {Homo sapiens}
PDB: 2a1a_B*
Length = 284
Score = 82.0 bits (203), Expect = 9e-17
Identities = 16/88 (18%), Positives = 34/88 (38%), Gaps = 4/88 (4%)
Query: 822 YDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQLHHPKLIN 881
+ +E IG+G FG V + + R G + K + E +E+ + +L H +++
Sbjct: 13 FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRV----KYNNEKAEREVKALAKLDHVNIVH 68
Query: 882 LHDAFEDDDEMVLIFEVLDRPHPPENLH 909
+ ++ D + L
Sbjct: 69 YNGCWDGFDYDPETSSKNSSRSKTKCLF 96
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin,
beta-sandwich, mceacam1A - immunoglobulin FO spike NTD -
galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus
musculus} PDB: 1l6z_A*
Length = 208
Score = 80.1 bits (197), Expect = 9e-17
Identities = 28/213 (13%), Positives = 65/213 (30%), Gaps = 27/213 (12%)
Query: 482 EIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITP------------------ 523
E+ + +++N +W KG+
Sbjct: 1 EVTIEAVPPQVAEDNNVLLLVHNLPLALGAFAWYKGNTTAIDKEIARFVPNSNMNFTGQA 60
Query: 524 -SARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPRF 582
S R I++ G +L+ + D Y ++ ++ + P +
Sbjct: 61 YSGREIIYSNG---SLLFQMITMKDMGVYTLDMTDENYRRTQATVRFHVHQPVTQPFLQV 117
Query: 583 RDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSERHAILTIRDASNV 642
+T + ++V + + I W +++ ++ + S+ ++IL I
Sbjct: 118 TNTTV-KELDSVTLTC-LSNDIGANIQWLFNSQSLQLTERMTL--SQNNSILRIDPIKRE 173
Query: 643 DTAPYRVVAENDLG-MDSAIVKIQISDRPDPPQ 674
D Y+ N + S +K+ I P
Sbjct: 174 DAGEYQCEISNPVSVRRSNSIKLDIIFDPHHHH 206
Score = 72.4 bits (177), Expect = 4e-14
Identities = 32/194 (16%), Positives = 63/194 (32%), Gaps = 24/194 (12%)
Query: 105 GKLLTLQCEATGTPVPKCRWLRNGREISSG--ARY----RVETAGGVFR----------L 148
+ L + W + AR+ + G + L
Sbjct: 14 DNNVLLLVHNLPLALGAFAWYKGNTTAIDKEIARFVPNSNMNFTGQAYSGREIIYSNGSL 73
Query: 149 HFNEVTDVDNGDYTCEAYNSVGFAHTSS--RVKIGTPPRIDRMPNALYIPEGDNTKVKIF 206
F +T D G YT + + ++ + + E D+ +
Sbjct: 74 LFQMITMKDMGVYTLDMTDENYRRTQATVRFHVHQPVTQPFLQVTNTTVKELDSVTLTC- 132
Query: 207 YAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNS-SGSV 265
+ D + N + +Q +R + + I+ I I++EDAG+Y +SN S
Sbjct: 133 LSNDIGANIQWLFNSQSLQLTERMTLS--QNNSILRIDPIKREDAGEYQCEISNPVSVRR 190
Query: 266 SGTFTINITGLPGP 279
S + ++I + P
Sbjct: 191 SNSIKLDI--IFDP 202
Score = 72.4 bits (177), Expect = 4e-14
Identities = 32/194 (16%), Positives = 63/194 (32%), Gaps = 24/194 (12%)
Query: 1712 GKLLTLQCEATGTPVPKCRWLRNGREISSG--ARY----RVETAGGVFR----------L 1755
+ L + W + AR+ + G + L
Sbjct: 14 DNNVLLLVHNLPLALGAFAWYKGNTTAIDKEIARFVPNSNMNFTGQAYSGREIIYSNGSL 73
Query: 1756 HFNEVTDVDNGDYTCEAYNSVGFAHTSS--RVKIGTPPRIDRMPNALYIPEGDNTKVKIF 1813
F +T D G YT + + ++ + + E D+ +
Sbjct: 74 LFQMITMKDMGVYTLDMTDENYRRTQATVRFHVHQPVTQPFLQVTNTTVKELDSVTLTC- 132
Query: 1814 YAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNS-SGSV 1872
+ D + N + +Q +R + + I+ I I++EDAG+Y +SN S
Sbjct: 133 LSNDIGANIQWLFNSQSLQLTERMTLS--QNNSILRIDPIKREDAGEYQCEISNPVSVRR 190
Query: 1873 SGTFTINITGLPGP 1886
S + ++I + P
Sbjct: 191 SNSIKLDI--IFDP 202
Score = 66.2 bits (161), Expect = 6e-12
Identities = 26/201 (12%), Positives = 57/201 (28%), Gaps = 17/201 (8%)
Query: 385 VVTQVGGDFVNLSWDKPLD-DGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLI 443
+V + +W K I + + + + I + + +
Sbjct: 20 LVHNLPLALGAFAWYKGNTTAIDKEIARFVPNSNMNFTGQAYSGREIIYSNGSLLFQMIT 79
Query: 444 EGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCT 503
+ + +E ++ + + + + N + + C
Sbjct: 80 MKDMGVYTLDMTDENY------RRTQATVRFHVHQPVTQPFLQVTNTTVKELDSVTLTC- 132
Query: 504 ITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVK- 562
++ I WL S+ + + R + L I+ + DA EY C N V+
Sbjct: 133 LSNDIGANIQWLFNSQSLQLTERMTLSQNNS--ILRIDPIKREDAGEYQCEISNPVSVRR 190
Query: 563 STKAELIIMTAPKFNVPPRFR 583
S +L I P
Sbjct: 191 SNSIKLDI------IFDPHHH 205
Score = 66.2 bits (161), Expect = 6e-12
Identities = 26/201 (12%), Positives = 57/201 (28%), Gaps = 17/201 (8%)
Query: 1992 VVTQVGGDFVNLSWDKPLD-DGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLI 2050
+V + +W K I + + + + I + + +
Sbjct: 20 LVHNLPLALGAFAWYKGNTTAIDKEIARFVPNSNMNFTGQAYSGREIIYSNGSLLFQMIT 79
Query: 2051 EGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCT 2110
+ + +E ++ + + + + N + + C
Sbjct: 80 MKDMGVYTLDMTDENY------RRTQATVRFHVHQPVTQPFLQVTNTTVKELDSVTLTC- 132
Query: 2111 ITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVK- 2169
++ I WL S+ + + R + L I+ + DA EY C N V+
Sbjct: 133 LSNDIGANIQWLFNSQSLQLTERMTLSQNNS--ILRIDPIKREDAGEYQCEISNPVSVRR 190
Query: 2170 STKAELIIMTAPKFNVPPRFR 2190
S +L I P
Sbjct: 191 SNSIKLDI------IFDPHHH 205
Score = 62.4 bits (151), Expect = 1e-10
Identities = 20/103 (19%), Positives = 37/103 (35%), Gaps = 4/103 (3%)
Query: 85 FVGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGG 144
V + + + V +TL C + +WL N + + R +
Sbjct: 105 HVHQPVTQPFLQVTNTTVKELDSVTLTCLSNDIG-ANIQWLFNSQSLQLTERMTLSQNNS 163
Query: 145 VFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSS-RVKIGTPPRI 186
+ L + + D G+Y CE N V ++S ++ I P
Sbjct: 164 I--LRIDPIKREDAGEYQCEISNPVSVRRSNSIKLDIIFDPHH 204
Score = 62.4 bits (151), Expect = 1e-10
Identities = 20/103 (19%), Positives = 37/103 (35%), Gaps = 4/103 (3%)
Query: 1692 FVGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGG 1751
V + + + V +TL C + +WL N + + R +
Sbjct: 105 HVHQPVTQPFLQVTNTTVKELDSVTLTCLSNDIG-ANIQWLFNSQSLQLTERMTLSQNNS 163
Query: 1752 VFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSS-RVKIGTPPRI 1793
+ L + + D G+Y CE N V ++S ++ I P
Sbjct: 164 I--LRIDPIKREDAGEYQCEISNPVSVRRSNSIKLDIIFDPHH 204
Score = 47.0 bits (111), Expect = 2e-05
Identities = 18/136 (13%), Positives = 39/136 (28%), Gaps = 22/136 (16%)
Query: 2089 EIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITP------------------ 2130
E+ + +++N +W KG+
Sbjct: 1 EVTIEAVPPQVAEDNNVLLLVHNLPLALGAFAWYKGNTTAIDKEIARFVPNSNMNFTGQA 60
Query: 2131 -SARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPRF 2189
S R I++ G +L+ + D Y ++ ++ + P +
Sbjct: 61 YSGREIIYSNG---SLLFQMITMKDMGVYTLDMTDENYRRTQATVRFHVHQPVTQPFLQV 117
Query: 2190 RDTAYFESDVVVVVCV 2205
+T E D V + C+
Sbjct: 118 TNTTVKELDSVTLTCL 133
Score = 44.7 bits (105), Expect = 1e-04
Identities = 19/104 (18%), Positives = 34/104 (32%), Gaps = 12/104 (11%)
Query: 1135 PKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQTIY 1194
P L + + TV + T+T S W N + R+ + N +
Sbjct: 109 PVTQPFLQVTNTTVKELDSVTLTC-LSNDIGANIQWLFNSQSLQLTERMTL-SQNNSILR 166
Query: 1195 RNKSAKRATDSGSYTIQLVNTVG---SDSASCKVYVVDKPSPPQ 1235
+ + D+G Y ++ N V S+S + P
Sbjct: 167 IDPI--KREDAGEYQCEISNPVSVRRSNSIKLDIIF-----DPH 203
Score = 39.6 bits (92), Expect = 0.005
Identities = 18/110 (16%), Positives = 40/110 (36%), Gaps = 5/110 (4%)
Query: 1398 TMNSSNSEPGKQSGPVIVEEQPNKPVMDLSGVRDITVKAGEDFSIHVPFMAFPQPAAFWF 1457
T++ ++ + V L V + TVK + ++ W
Sbjct: 87 TLDMTDENYRRTQATVRFHVHQPVTQPFLQ-VTNTTVKELDSVTLTCLSND-IGANIQWL 144
Query: 1458 ANDSIIDDSDTRVHKQLTMNSASLVVKNSQRSDGGQYRLQLKNPAGFDTA 1507
N + ++ L+ N++ L + +R D G+Y+ ++ NP +
Sbjct: 145 FNSQSLQLTE---RMTLSQNNSILRIDPIKREDAGEYQCEISNPVSVRRS 191
Score = 38.1 bits (88), Expect = 0.014
Identities = 25/184 (13%), Positives = 54/184 (29%), Gaps = 25/184 (13%)
Query: 591 GENVVVKIPFTGYPKPKITWYRDNEVIESG----------------GHFHVETSERHAIL 634
NV++ + WY+ N + E + L
Sbjct: 14 DNNVLLLVHNLPLALGAFAWYKGNTTAIDKEIARFVPNSNMNFTGQAYSGREIIYSNGSL 73
Query: 635 TIRDASNVDTAPYRVVAENDLG-MDSAIVKIQISDRPDPP--QFPTVEDIGHDSLALVWR 691
+ + D Y + ++ A V+ + P Q DS+ L
Sbjct: 74 LFQMITMKDMGVYTLDMTDENYRRTQATVRFHVHQPVTQPFLQVTNTTVKELDSVTLTCL 133
Query: 692 APIWDGGSNITNYIVEKREHPMSSWIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYG-- 749
+ D G+NI ++ + ++ + + + + I + E++ N
Sbjct: 134 SN--DIGANIQ-WLFNSQSLQLTERMTLSQNN-SILRIDPIKREDAGEYQCEISNPVSVR 189
Query: 750 RSDP 753
RS+
Sbjct: 190 RSNS 193
Score = 32.7 bits (74), Expect = 0.94
Identities = 20/116 (17%), Positives = 30/116 (25%), Gaps = 18/116 (15%)
Query: 1147 TVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRI------------KFETSENQTIY 1194
V + V W G+ + D I S + IY
Sbjct: 10 QVAEDNNVLLLVHNLPLALGAFAW-YKGNTTAIDKEIARFVPNSNMNFTGQAYSGREIIY 68
Query: 1195 RNKS----AKRATDSGSYTIQLVNTVGSDSASCKVYVVDKPSPPQGPLDVSDITPE 1246
N S D G YT+ + + V Q L V++ T +
Sbjct: 69 SNGSLLFQMITMKDMGVYTLDMTDENYR-RTQATVRFHVHQPVTQPFLQVTNTTVK 123
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation,
staurosporine, transfe; HET: STU; 2.70A {Homo sapiens}
SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Length = 400
Score = 84.0 bits (208), Expect = 9e-17
Identities = 20/96 (20%), Positives = 46/96 (47%), Gaps = 11/96 (11%)
Query: 811 VDIKTSSVYDHYDIL-EEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEID 869
+ IK +++ D Y + + +G G G V + ++T FA K + + R+E++
Sbjct: 52 LQIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ-----DCPKARREVE 106
Query: 870 IMNQL-HHPKLINLHDAFED----DDEMVLIFEVLD 900
+ + P ++ + D +E+ ++++ E LD
Sbjct: 107 LHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLD 142
>1cd9_B G-CSF-R, protein (G-CSF receptor); class1 cytokine, hematopoietic
receptor, signal transduction cytokine; HET: NAG; 2.80A
{Mus musculus} SCOP: b.1.2.1 b.1.2.1 PDB: 1pgr_B 1cto_A
1gcf_A
Length = 215
Score = 80.2 bits (197), Expect = 1e-16
Identities = 32/217 (14%), Positives = 64/217 (29%), Gaps = 21/217 (9%)
Query: 277 PGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTC----- 331
P P + +T ++ W P + L T ++++ T
Sbjct: 5 PASPSNLSCLMHLTTNSLVCQWEPGP-ETHLP-TSFILKSFRSRADCQYQGDTIPDCVAK 62
Query: 332 ---HDTTFIVQGLTEGQEYLFHVMAVNENGMGP-PLEGINPIKAKSPYDKPSPPGIPVVT 387
++ + + L Q V A N G P ++P+ K PP + +
Sbjct: 63 KRQNNCSIPRKNLLLYQYMAIWVQAENMLGSSESPKLCLDPMD----VVKLEPPMLQALD 118
Query: 388 ------QVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPN 441
+ LSW + + ++ W V + Q +
Sbjct: 119 IGPDVVSHQPGCLWLSWKPWKPSEYMEQECELRYQPQLKGANWTLVFHLPSSKDQFELCG 178
Query: 442 LIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAA 478
L + Y ++ + S S +Q++ M A
Sbjct: 179 LHQAPVYTLQMRCIRSSLPGFWSPWSPGLQLRPTMKA 215
Score = 80.2 bits (197), Expect = 1e-16
Identities = 32/217 (14%), Positives = 64/217 (29%), Gaps = 21/217 (9%)
Query: 1884 PGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTC----- 1938
P P + +T ++ W P + L T ++++ T
Sbjct: 5 PASPSNLSCLMHLTTNSLVCQWEPGP-ETHLP-TSFILKSFRSRADCQYQGDTIPDCVAK 62
Query: 1939 ---HDTTFIVQGLTEGQEYLFHVMAVNENGMGP-PLEGINPIKAKSPYDKPSPPGIPVVT 1994
++ + + L Q V A N G P ++P+ K PP + +
Sbjct: 63 KRQNNCSIPRKNLLLYQYMAIWVQAENMLGSSESPKLCLDPMD----VVKLEPPMLQALD 118
Query: 1995 ------QVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPN 2048
+ LSW + + ++ W V + Q +
Sbjct: 119 IGPDVVSHQPGCLWLSWKPWKPSEYMEQECELRYQPQLKGANWTLVFHLPSSKDQFELCG 178
Query: 2049 LIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAA 2085
L + Y ++ + S S +Q++ M A
Sbjct: 179 LHQAPVYTLQMRCIRSSLPGFWSPWSPGLQLRPTMKA 215
Score = 73.3 bits (179), Expect = 3e-14
Identities = 36/238 (15%), Positives = 70/238 (29%), Gaps = 48/238 (20%)
Query: 902 PHPPENLHADEFAGD--SLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTKVSSYVTTPF 959
P P NL SL W P + T+++++ + + +
Sbjct: 5 PASPSNLSC-LMHLTTNSLVCQWEPGPETHLP--TSFILKSFRSRADCQYQGDTIPDCVA 61
Query: 960 VRVRN--------LAIGSTYEFRVMAENQYGLSK-PALTIDPIKAKH--PFDVPGAPGAP 1008
+ +N L + V AEN G S+ P L +DP+ P + P
Sbjct: 62 KKRQNNCSIPRKNLLLYQYMAIWVQAENMLGSSESPKLCLDPMDVVKLEPPMLQALDIGP 121
Query: 1009 KGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVS 1068
V + L W + + + + + W + H+P + ++ L
Sbjct: 122 DVVSHQPGCLWLSWKPWKPSEYMEQECELRYQPQLKGANWTL--VFHLPSSKDQFEL--- 176
Query: 1069 EGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPWSSSSDII 1126
L + Y ++ + ++ G WS S +
Sbjct: 177 ---------------------------CGLHQAPVYTLQMRCIRSSLPGFWSPWSPGL 207
Score = 55.6 bits (133), Expect = 3e-08
Identities = 18/127 (14%), Positives = 35/127 (27%), Gaps = 11/127 (8%)
Query: 648 RVVAENDLGM---DSAIVKIQISDRPDPPQFPTVE------DIGHDSLALVWRAPIWDGG 698
V AEN LG + + +PP ++ L L W+
Sbjct: 84 WVQAENMLGSSESPKLCLDPMDVVKLEPPMLQALDIGPDVVSHQPGCLWLSWKPWKPSEY 143
Query: 699 SNITNYIVEKREHPMSSWIRVGNTRF--TTMAITGLSPGHQYEFRVYAENVYGRSDPSTT 756
+ + + ++W V + + GL Y ++ S
Sbjct: 144 MEQECELRYQPQLKGANWTLVFHLPSSKDQFELCGLHQAPVYTLQMRCIRSSLPGFWSPW 203
Query: 757 SDLITTK 763
S + +
Sbjct: 204 SPGLQLR 210
Score = 54.4 bits (130), Expect = 7e-08
Identities = 24/129 (18%), Positives = 37/129 (28%), Gaps = 17/129 (13%)
Query: 1208 YTIQL--VNTVG---SDSASCKVYVVDKPSPPQGP-----LDVSDITPESCSLSWKPPLD 1257
I + N +G S V K PP DV P LSWKP
Sbjct: 81 MAIWVQAENMLGSSESPKLCLDPMDVVKLEPPMLQALDIGPDVVSHQPGCLWLSWKPWKP 140
Query: 1258 DGGSPITNYVVEKYESATGFWSKLSSF-VRSPAYDVFGLETNRQYRFRVRAENQYGV--- 1313
+ + + W+ + +++ GL Y ++R
Sbjct: 141 SEYMEQECELRYQPQLKGANWTLVFHLPSSKDQFELCGLHQAPVYTLQMRCIRSSLPGFW 200
Query: 1314 ---SEPLEL 1319
S L+L
Sbjct: 201 SPWSPGLQL 209
Score = 49.0 bits (116), Expect = 4e-06
Identities = 26/190 (13%), Positives = 53/190 (27%), Gaps = 21/190 (11%)
Query: 1231 PSPPQGPLDVSDITPESCSLSWKPPLDDGGSPITNYVVEKYESATGFWSKLSSFVRSPA- 1289
P+ P + +T S W+P + T+++++ + S + + A
Sbjct: 5 PASPSNLSCLMHLTTNSLVCQWEPGPE--THLPTSFILKSFRSRADCQYQGDTIPDCVAK 62
Query: 1290 -------YDVFGLETNRQYRFRVRAENQYG--VSEPLELD-NSITAKFPFTVPDPPGQPQ 1339
L + V+AEN G S L LD + P + P
Sbjct: 63 KRQNNCSIPRKNLLLYQYMAIWVQAENMLGSSESPKLCLDPMDVVKLEPPMLQALDIGPD 122
Query: 1340 IVDWDTNNATLMWDRPRTDGGSKIQGYKMLLKTPTGELPTTIWSKIRPTSSTVYCKDTTM 1399
+V L W + + + ++ + W+ + S+
Sbjct: 123 VVSHQPGCLWLSWKPWKPSEYMEQE-CELRYQPQLKG---ANWTLVFHLPSS----KDQF 174
Query: 1400 NSSNSEPGKQ 1409
Sbjct: 175 ELCGLHQAPV 184
Score = 46.7 bits (110), Expect = 3e-05
Identities = 14/100 (14%), Positives = 27/100 (27%), Gaps = 7/100 (7%)
Query: 890 DEMVLIFEVLDRPHPPENLHAD------EFAGDSLTLYWTPPRDNGGSEITNYVVEKKDY 943
++ L + + PP D L L W P + + E + +
Sbjct: 97 PKLCLDPMDVVKLEPPMLQALDIGPDVVSHQPGCLWLSWKPWKPSEYMEQECELRYQPQL 156
Query: 944 NSTVWTKVSSYVTT-PFVRVRNLAIGSTYEFRVMAENQYG 982
WT V ++ + L Y ++
Sbjct: 157 KGANWTLVFHLPSSKDQFELCGLHQAPVYTLQMRCIRSSL 196
Score = 35.2 bits (80), Expect = 0.18
Identities = 9/67 (13%), Positives = 21/67 (31%), Gaps = 6/67 (8%)
Query: 21 CYIIERREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGK------SEPS 74
C + + ++ GA W + F + L + Y ++ + + S
Sbjct: 148 CELRYQPQLKGANWTLVFHLPSSKDQFELCGLHQAPVYTLQMRCIRSSLPGFWSPWSPGL 207
Query: 75 ICTTPVK 81
+K
Sbjct: 208 QLRPTMK 214
Score = 30.9 bits (69), Expect = 3.3
Identities = 14/98 (14%), Positives = 30/98 (30%), Gaps = 12/98 (12%)
Query: 670 PDPPQFPT-VEDIGHDSLALVWRAPIWDGGSNITNYIV---------EKREHPMSSWIRV 719
P P + + + +SL W + T++I+ + + + +
Sbjct: 5 PASPSNLSCLMHLTTNSLVCQWEPGP-ETHLP-TSFILKSFRSRADCQYQGDTIPDCVAK 62
Query: 720 GNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTS 757
++ L V AEN+ G S+
Sbjct: 63 KRQNNCSIPRKNLLLYQYMAIWVQAENMLGSSESPKLC 100
Score = 30.6 bits (68), Expect = 4.3
Identities = 8/62 (12%), Positives = 19/62 (30%), Gaps = 6/62 (9%)
Query: 1633 EREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGK------SEPSICTTP 1686
+ ++ GA W + F + L + Y ++ + + S
Sbjct: 153 QPQLKGANWTLVFHLPSSKDQFELCGLHQAPVYTLQMRCIRSSLPGFWSPWSPGLQLRPT 212
Query: 1687 VK 1688
+K
Sbjct: 213 MK 214
>3qr2_A Basigin; CD147, EMMPRIN, immunoglobulin-like domain, beta sheet,
STRU genomics, berkeley structural genomics center,
BSGC, cell A; 2.30A {Homo sapiens} PDB: 3qqn_A
Length = 137
Score = 77.8 bits (191), Expect = 1e-16
Identities = 23/107 (21%), Positives = 39/107 (36%), Gaps = 13/107 (12%)
Query: 87 GGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREIS-------SGARYRV 139
G F+ +G + L CEA G+PVP+ +W G+ + GAR
Sbjct: 18 GSHMAGFVQAPLSQQRWVGGSVELHCEAVGSPVPEIQWWFEGQGPNDICSQLWDGARLDR 77
Query: 140 ETAGGVFR------LHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKI 180
+ + + + + D G Y C A N H + ++
Sbjct: 78 VHIHATYHQHAASTISIDTLVEEDTGTYECRASNDPDRNHLTRAPRV 124
Score = 77.8 bits (191), Expect = 1e-16
Identities = 23/107 (21%), Positives = 39/107 (36%), Gaps = 13/107 (12%)
Query: 1694 GGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREIS-------SGARYRV 1746
G F+ +G + L CEA G+PVP+ +W G+ + GAR
Sbjct: 18 GSHMAGFVQAPLSQQRWVGGSVELHCEAVGSPVPEIQWWFEGQGPNDICSQLWDGARLDR 77
Query: 1747 ETAGGVFR------LHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKI 1787
+ + + + + D G Y C A N H + ++
Sbjct: 78 VHIHATYHQHAASTISIDTLVEEDTGTYECRASNDPDRNHLTRAPRV 124
Score = 75.8 bits (186), Expect = 5e-16
Identities = 17/118 (14%), Positives = 31/118 (26%), Gaps = 14/118 (11%)
Query: 475 PMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSAR-------- 526
P + + + + + C G P P I W +
Sbjct: 16 PRGSHMAGFVQAPLSQQRWVGGSVELHCEAVGSPVPEIQWWFEGQGPNDICSQLWDGARL 75
Query: 527 -----HHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAEL-IIMTAPKFNV 578
H + + T+ I+++ D Y CRA N + + V
Sbjct: 76 DRVHIHATYHQHAASTISIDTLVEEDTGTYECRASNDPDRNHLTRAPRVKWVRAQAVV 133
Score = 75.8 bits (186), Expect = 5e-16
Identities = 17/118 (14%), Positives = 31/118 (26%), Gaps = 14/118 (11%)
Query: 2082 PMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSAR-------- 2133
P + + + + + C G P P I W +
Sbjct: 16 PRGSHMAGFVQAPLSQQRWVGGSVELHCEAVGSPVPEIQWWFEGQGPNDICSQLWDGARL 75
Query: 2134 -----HHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAEL-IIMTAPKFNV 2185
H + + T+ I+++ D Y CRA N + + V
Sbjct: 76 DRVHIHATYHQHAASTISIDTLVEEDTGTYECRASNDPDRNHLTRAPRVKWVRAQAVV 133
Score = 53.1 bits (127), Expect = 5e-08
Identities = 16/102 (15%), Positives = 29/102 (28%), Gaps = 16/102 (15%)
Query: 572 TAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSERH 631
F P + G +V + G P P+I W+ + + + +
Sbjct: 20 HMAGFVQAPL---SQQRWVGGSVELHCEAVGSPVPEIQWWFEGQGPNDICSQLWDGARLD 76
Query: 632 AI-------------LTIRDASNVDTAPYRVVAENDLGMDSA 660
+ ++I DT Y A ND +
Sbjct: 77 RVHIHATYHQHAASTISIDTLVEEDTGTYECRASNDPDRNHL 118
Score = 45.4 bits (107), Expect = 2e-05
Identities = 17/121 (14%), Positives = 31/121 (25%), Gaps = 16/121 (13%)
Query: 1132 PCAPKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVS------PDGRIKF 1185
G + G P P W G + DG
Sbjct: 19 SHMAGFVQAP--LSQQRWVGGSVELHCEAVGSPVPEIQWWFEGQGPNDICSQLWDGARLD 76
Query: 1186 ETSENQTIYRNKSAK------RATDSGSYTIQLVNTVGSDSASCKVYVVDKPSPPQGPLD 1239
+ T +++ ++ D+G+Y + N + + V K Q +
Sbjct: 77 RVHIHATYHQHAASTISIDTLVEEDTGTYECRASNDPDRNHLTRAPRV--KWVRAQAVVL 134
Query: 1240 V 1240
V
Sbjct: 135 V 135
Score = 41.2 bits (96), Expect = 6e-04
Identities = 18/135 (13%), Positives = 40/135 (29%), Gaps = 15/135 (11%)
Query: 1399 MNSSNSEPGKQSGPVIVEEQPNKPVMDLSGVRDITVKAGEDFSIHVPFMAFPQPAAFWFA 1458
M SS+ SG +V + + G +H + P P W+
Sbjct: 1 MGSSHHHHHHSSG--LVPRGSHMAGF-VQAPLSQQRWVGGSVELHCEAVGSPVPEIQWWF 57
Query: 1459 NDSIIDDSDTRVHKQLTM------------NSASLVVKNSQRSDGGQYRLQLKNPAGFDT 1506
+D +++ + ++++ + D G Y + N +
Sbjct: 58 EGQGPNDICSQLWDGARLDRVHIHATYHQHAASTISIDTLVEEDTGTYECRASNDPDRNH 117
Query: 1507 ATLHSRLRTLPDSVN 1521
T R++ +
Sbjct: 118 LTRAPRVKWVRAQAV 132
Score = 40.0 bits (93), Expect = 0.002
Identities = 17/132 (12%), Positives = 34/132 (25%), Gaps = 18/132 (13%)
Query: 159 GDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLT 218
G ++S G + + P + G + ++ G E+
Sbjct: 2 GSSHHHHHHSSGLV-----PRGSHMAGFVQAPLSQQRWVGGSVELHCEAVGSPVPEIQWW 56
Query: 219 KNGRVVQSD-----DRFKFTVLDDYIII--------FIKEIRKEDAGDYTVNLSNSSGSV 265
G+ D + + + I + +ED G Y SN
Sbjct: 57 FEGQGPNDICSQLWDGARLDRVHIHATYHQHAASTISIDTLVEEDTGTYECRASNDPDRN 116
Query: 266 SGTFTINITGLP 277
T + +
Sbjct: 117 HLTRAPRVKWVR 128
Score = 40.0 bits (93), Expect = 0.002
Identities = 17/132 (12%), Positives = 34/132 (25%), Gaps = 18/132 (13%)
Query: 1766 GDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLT 1825
G ++S G + + P + G + ++ G E+
Sbjct: 2 GSSHHHHHHSSGLV-----PRGSHMAGFVQAPLSQQRWVGGSVELHCEAVGSPVPEIQWW 56
Query: 1826 KNGRVVQSD-----DRFKFTVLDDYIII--------FIKEIRKEDAGDYTVNLSNSSGSV 1872
G+ D + + + I + +ED G Y SN
Sbjct: 57 FEGQGPNDICSQLWDGARLDRVHIHATYHQHAASTISIDTLVEEDTGTYECRASNDPDRN 116
Query: 1873 SGTFTINITGLP 1884
T + +
Sbjct: 117 HLTRAPRVKWVR 128
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling
protein complex, angiogenesis, glycoprotein, HOST-virus
interaction, membrane; HET: NAG BMA; 2.70A {Homo
sapiens} PDB: 2x1x_R*
Length = 213
Score = 80.2 bits (197), Expect = 1e-16
Identities = 23/192 (11%), Positives = 48/192 (25%), Gaps = 12/192 (6%)
Query: 494 QNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVC 553
+N C + +S E + + I S A C
Sbjct: 23 KNKTVVIPCLGSI-SNLNVSLCARYPEKRFVPDGNRISWDSKKGFTIPSYMISYAGMVFC 81
Query: 554 RAVNKGGVKSTKAELIIMTAPKF-NVPPRFRDTAYFDKGENVVVKIPFTGYP--KPKITW 610
A + ++++ + +V GE +V+ W
Sbjct: 82 EAKINDESYQSIMYIVVVVGYRIYDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNW 141
Query: 611 YRDNEVIESGG--------HFHVETSERHAILTIRDASNVDTAPYRVVAENDLGMDSAIV 662
+ + E + + LTI + D Y A + L
Sbjct: 142 EYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGLMTKKNST 201
Query: 663 KIQISDRPDPPQ 674
+++ + P +
Sbjct: 202 FVRVHEDPIEGR 213
Score = 69.4 bits (169), Expect = 5e-13
Identities = 25/212 (11%), Positives = 61/212 (28%), Gaps = 21/212 (9%)
Query: 85 FVGGEKPDFIVPLKDLVVPLGKLLTLQCEAT--GTPVPKCRWLRNGREISSGARYRVETA 142
F+ + + K + + C + V C R + G R ++
Sbjct: 6 FI--ASVSDQHGVVYITENKNKTVVIPCLGSISNLNVSLCARYPEKRFVPDGNRISWDSK 63
Query: 143 GGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRI----DRMPNALYIPEG 198
G G CEA + + + + RI + + + G
Sbjct: 64 KG---FTIPSYMISYAGMVFCEAKINDESYQSIMYIVVVVGYRIYDVVLSPSHGIELSVG 120
Query: 199 DNTKVKIFYAGDQPMEVSLT--------KNGRVVQSDDRFKF--TVLDDYIIIFIKEIRK 248
+ + + + + ++ ++V D + + + + I + +
Sbjct: 121 EKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTR 180
Query: 249 EDAGDYTVNLSNSSGSVSGTFTINITGLPGPP 280
D G YT S+ + + + + P
Sbjct: 181 SDQGLYTCAASSGLMTKKNSTFVRVHEDPIEG 212
Score = 69.4 bits (169), Expect = 5e-13
Identities = 25/212 (11%), Positives = 61/212 (28%), Gaps = 21/212 (9%)
Query: 1692 FVGGEKPDFIVPLKDLVVPLGKLLTLQCEAT--GTPVPKCRWLRNGREISSGARYRVETA 1749
F+ + + K + + C + V C R + G R ++
Sbjct: 6 FI--ASVSDQHGVVYITENKNKTVVIPCLGSISNLNVSLCARYPEKRFVPDGNRISWDSK 63
Query: 1750 GGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRI----DRMPNALYIPEG 1805
G G CEA + + + + RI + + + G
Sbjct: 64 KG---FTIPSYMISYAGMVFCEAKINDESYQSIMYIVVVVGYRIYDVVLSPSHGIELSVG 120
Query: 1806 DNTKVKIFYAGDQPMEVSLT--------KNGRVVQSDDRFKF--TVLDDYIIIFIKEIRK 1855
+ + + + + ++ ++V D + + + + I + +
Sbjct: 121 EKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTR 180
Query: 1856 EDAGDYTVNLSNSSGSVSGTFTINITGLPGPP 1887
D G YT S+ + + + + P
Sbjct: 181 SDQGLYTCAASSGLMTKKNSTFVRVHEDPIEG 212
Score = 57.5 bits (138), Expect = 5e-09
Identities = 22/122 (18%), Positives = 38/122 (31%), Gaps = 10/122 (8%)
Query: 77 TTPVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTP--VPKCRWLRNGREISSG 134
+ + + P + + +G+ L L C A W +
Sbjct: 92 SIMYIVVVVGYRIYDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHK 151
Query: 135 A---RYRVETAGGVFR-----LHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRI 186
R +G + L + VT D G YTC A + + S+ V++ P
Sbjct: 152 KLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRVHEDPIE 211
Query: 187 DR 188
R
Sbjct: 212 GR 213
Score = 57.5 bits (138), Expect = 5e-09
Identities = 22/122 (18%), Positives = 38/122 (31%), Gaps = 10/122 (8%)
Query: 1684 TTPVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTP--VPKCRWLRNGREISSG 1741
+ + + P + + +G+ L L C A W +
Sbjct: 92 SIMYIVVVVGYRIYDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHK 151
Query: 1742 A---RYRVETAGGVFR-----LHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRI 1793
R +G + L + VT D G YTC A + + S+ V++ P
Sbjct: 152 KLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRVHEDPIE 211
Query: 1794 DR 1795
R
Sbjct: 212 GR 213
Score = 52.9 bits (126), Expect = 2e-07
Identities = 19/131 (14%), Positives = 29/131 (22%), Gaps = 14/131 (10%)
Query: 2061 AQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCP--KPT 2118
A+ S S + ++ P CT
Sbjct: 83 AKINDE----SYQSIMYIVVVVGYRIYDVVLSPSHGIELSVGEKLVLNCTARTELNVGID 138
Query: 2119 ISWL---KGSREITPSARHHIFAEGDTY-----TLIINSVYGVDADEYVCRAVNKGGVKS 2170
+W + R G TL I+ V D Y C A + K
Sbjct: 139 FNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGLMTKK 198
Query: 2171 TKAELIIMTAP 2181
+ + P
Sbjct: 199 NSTFVRVHEDP 209
Score = 47.1 bits (111), Expect = 2e-05
Identities = 19/187 (10%), Positives = 45/187 (24%), Gaps = 17/187 (9%)
Query: 1058 DTSLKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQG 1117
++L L + G+ + IP+ + C +
Sbjct: 35 ISNLNVSLCARYPEKRFVPDGNRISWDSKKGFTIPS--YMISYAGMV---FCEAKINDES 89
Query: 1118 PWSSSSDIIMCCAPPCAPKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTP--IWTVNGD 1175
S +++ ++ + + GE+ + W
Sbjct: 90 YQSIMYIVVVVGYRIYDVVLSPS---HGIELSVGEKLVLNCTARTELNVGIDFNWEYPSS 146
Query: 1176 EVSPDGRIKFETSENQTIYRNKSAK-------RATDSGSYTIQLVNTVGSDSASCKVYVV 1228
+ + + K +D G YT + + + S V V
Sbjct: 147 KHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRVH 206
Query: 1229 DKPSPPQ 1235
+ P +
Sbjct: 207 EDPIEGR 213
Score = 44.4 bits (104), Expect = 1e-04
Identities = 11/106 (10%), Positives = 25/106 (23%), Gaps = 3/106 (2%)
Query: 2101 QNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVC 2160
+N C + +S E + + I S A C
Sbjct: 23 KNKTVVIPCLGSI-SNLNVSLCARYPEKRFVPDGNRISWDSKKGFTIPSYMISYAGMVFC 81
Query: 2161 RAVNKGGVKSTKAELIIMTAPKFNVPPRF--RDTAYFESDVVVVVC 2204
A + ++++ + + +V+ C
Sbjct: 82 EAKINDESYQSIMYIVVVVGYRIYDVVLSPSHGIELSVGEKLVLNC 127
Score = 39.8 bits (92), Expect = 0.005
Identities = 30/204 (14%), Positives = 56/204 (27%), Gaps = 31/204 (15%)
Query: 1328 PFTVPDPPGQPQIVDWDTN--------------NATLMWDRPRTDGGSKIQGYKMLLKTP 1373
PF + Q +V N N + + G ++ +
Sbjct: 5 PF-IASVSDQHGVVYITENKNKTVVIPCLGSISNLNVSLCARYPEKRFVPDGNRISWDSK 63
Query: 1374 TGELPTTIWSKIRPTSSTVYCKDTTMNSSNSEPGKQSGPVIVEEQPNKPVMDLSGVRDIT 1433
G TI S + + V+C+ N E + ++V + LS I
Sbjct: 64 KG---FTIPSYMISYAGMVFCEAK----INDESYQSIMYIVVVVGYRIYDVVLSPSHGIE 116
Query: 1434 VKAGEDFSIHVPFMAFPQPAA--FWFANDSIIDDSD-------TRVHKQLTMNSASLVVK 1484
+ GE ++ W S T+ ++ ++L +
Sbjct: 117 LSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTID 176
Query: 1485 NSQRSDGGQYRLQLKNPAGFDTAT 1508
RSD G Y + +
Sbjct: 177 GVTRSDQGLYTCAASSGLMTKKNS 200
Score = 33.2 bits (75), Expect = 0.60
Identities = 20/181 (11%), Positives = 45/181 (24%), Gaps = 15/181 (8%)
Query: 590 KGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAPYRV 649
K + VV+ + ++ + + + TI
Sbjct: 23 KNKTVVIPCLGSI-SNLNVSLCARYPEKRFVPDGNRISWDSKKGFTIPSYMISYAGMVFC 81
Query: 650 VAENDLGMDSAIVKIQISDRPDPPQF-----PTVEDIGHDSLAL---VWRAP------IW 695
A+ + +I+ I + +E + L L W
Sbjct: 82 EAKINDESYQSIMYIVVVVGYRIYDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNW 141
Query: 696 DGGSNITNYIVEKREHPMSSWIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPST 755
+ S+ + + +T+ I G++ Q + A + ST
Sbjct: 142 EYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGLMTKKNST 201
Query: 756 T 756
Sbjct: 202 F 202
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension,
transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Length = 303
Score = 82.4 bits (204), Expect = 1e-16
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Query: 820 DHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPV-SHNLEKELIRKEIDIMNQLHHPK 878
D Y++ E IG+GA VV A K I + + + KEI M+Q HHP
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 74
Query: 879 LINLHDAFEDDDEMVLIFE 897
+++ + +F DE+ L+ +
Sbjct: 75 IVSYYTSFVVKDELWLVMK 93
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast);
two-LOBE protein kinase fold, ATP-binding, nucleotid
binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens}
PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A*
3ggf_A* 2xik_A*
Length = 303
Score = 81.6 bits (202), Expect = 2e-16
Identities = 22/79 (27%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 820 DHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPV-SHNLEKELIRKEIDIMNQLHHPK 878
+ + LE+IG G+FG V + + +T + A K I + E E I++EI +++Q P
Sbjct: 22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 81
Query: 879 LINLHDAFEDDDEMVLIFE 897
+ + ++ D ++ +I E
Sbjct: 82 VTKYYGSYLKDTKLWIIME 100
>1wk0_A KIAA0970 protein; fibronectin type III domain, structural genomics,
riken structural genomics/proteomics initiative, RSGI,
unknown function; NMR {Homo sapiens} SCOP: b.1.2.1
Length = 137
Score = 77.0 bits (189), Expect = 2e-16
Identities = 25/138 (18%), Positives = 37/138 (26%), Gaps = 15/138 (10%)
Query: 259 SNSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLK--------VT 310
S SSG L S+I T L W+PP + +
Sbjct: 3 SGSSGDEETK---AFEALLSNI-VKPVASDIQARTVVLTWSPPSSLINGETDESSVPELY 58
Query: 311 HYVVERRDISMPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIK 370
Y V +T + L +Y V A + G P E
Sbjct: 59 GYEVLISSTGKDGKYKSVYVGEETNITLNDLKPAMDYHAKVQAEYNSIKGTPSE---AEI 115
Query: 371 AKSPYDKPSPPGIPVVTQ 388
+ +P P P ++
Sbjct: 116 FTTLSCEPDIPNPPRISG 133
Score = 77.0 bits (189), Expect = 2e-16
Identities = 25/138 (18%), Positives = 37/138 (26%), Gaps = 15/138 (10%)
Query: 1866 SNSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLK--------VT 1917
S SSG L S+I T L W+PP + +
Sbjct: 3 SGSSGDEETK---AFEALLSNI-VKPVASDIQARTVVLTWSPPSSLINGETDESSVPELY 58
Query: 1918 HYVVERRDISMPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIK 1977
Y V +T + L +Y V A + G P E
Sbjct: 59 GYEVLISSTGKDGKYKSVYVGEETNITLNDLKPAMDYHAKVQAEYNSIKGTPSE---AEI 115
Query: 1978 AKSPYDKPSPPGIPVVTQ 1995
+ +P P P ++
Sbjct: 116 FTTLSCEPDIPNPPRISG 133
Score = 75.8 bits (186), Expect = 6e-16
Identities = 24/124 (19%), Positives = 34/124 (27%), Gaps = 12/124 (9%)
Query: 1227 VVDKPSPPQGPLDVSDITPESCSLSWKPPLDDGGS--------PITNYVVEKYESATGFW 1278
S P SDI + L+W PP + Y V +
Sbjct: 14 FEALLSNIVKP-VASDIQARTVVLTWSPPSSLINGETDESSVPELYGYEVLISSTGKDGK 72
Query: 1279 SKLSSFVRSPAYDVFGLETNRQYRFRVRAENQYGVSEPLELDNSITAKFPFTVPDPPGQP 1338
K + L+ Y +V+AE P E + PD P P
Sbjct: 73 YKSVYVGEETNITLNDLKPAMDYHAKVQAEYNSIKGTPSE---AEIFTTLSCEPDIPNPP 129
Query: 1339 QIVD 1342
+I
Sbjct: 130 RISG 133
Score = 65.0 bits (158), Expect = 3e-12
Identities = 19/103 (18%), Positives = 27/103 (26%), Gaps = 9/103 (8%)
Query: 668 DRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSN--------ITNYIVEKREHPMSSWIR- 718
P DI ++ L W P + Y V +
Sbjct: 16 ALLSNIVKPVASDIQARTVVLTWSPPSSLINGETDESSVPELYGYEVLISSTGKDGKYKS 75
Query: 719 VGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLIT 761
V T + + L P Y +V AE + PS T
Sbjct: 76 VYVGEETNITLNDLKPAMDYHAKVQAEYNSIKGTPSEAEIFTT 118
Score = 62.7 bits (152), Expect = 2e-11
Identities = 18/125 (14%), Positives = 30/125 (24%), Gaps = 11/125 (8%)
Query: 898 VLDRPHPPENLHADEFAGDSLTLYWTPPRDNGGSE--------ITNYVVEKKDYNSTVWT 949
A + ++ L W+PP E + Y V
Sbjct: 14 FEALLSNIVKPVASDIQARTVVLTWSPPSSLINGETDESSVPELYGYEVLISSTGKDGKY 73
Query: 950 KVSSYVTTPFVRVRNLAIGSTYEFRVMAENQYGLSKPALTIDPIKAKHPFDVPGAPGAPK 1009
K + + +L Y +V AE P + P P P+
Sbjct: 74 KSVYVGEETNITLNDLKPAMDYHAKVQAEYNSIKGTP---SEAEIFTTLSCEPDIPNPPR 130
Query: 1010 GVDST 1014
+
Sbjct: 131 ISGPS 135
Score = 61.5 bits (149), Expect = 5e-11
Identities = 20/108 (18%), Positives = 34/108 (31%), Gaps = 9/108 (8%)
Query: 367 NPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSR--------IQGYWIDKHE 418
+ K+ S PV + + V L+W P + GY +
Sbjct: 7 GDEETKAFEALLSNIVKPVASDIQARTVVLTWSPPSSLINGETDESSVPELYGYEVLISS 66
Query: 419 VGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSA 466
G D + + I + +L Y +V A+ + PS A
Sbjct: 67 TGKDGKYKSVYVGEETN-ITLNDLKPAMDYHAKVQAEYNSIKGTPSEA 113
Score = 61.5 bits (149), Expect = 5e-11
Identities = 20/108 (18%), Positives = 34/108 (31%), Gaps = 9/108 (8%)
Query: 1974 NPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSR--------IQGYWIDKHE 2025
+ K+ S PV + + V L+W P + GY +
Sbjct: 7 GDEETKAFEALLSNIVKPVASDIQARTVVLTWSPPSSLINGETDESSVPELYGYEVLISS 66
Query: 2026 VGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSA 2073
G D + + I + +L Y +V A+ + PS A
Sbjct: 67 TGKDGKYKSVYVGEETN-ITLNDLKPAMDYHAKVQAEYNSIKGTPSEA 113
Score = 56.9 bits (137), Expect = 2e-09
Identities = 24/160 (15%), Positives = 42/160 (26%), Gaps = 44/160 (27%)
Query: 991 DPIKAKHPFDVPGAPGAPKGVDSTEDSISLVWSKPRHDGGS--------PIQRYIVEKRL 1042
+ K + P D ++ L WS P + Y V
Sbjct: 7 GDEETKAFEALLSNIVKPVASDIQARTVVLTWSPPSSLINGETDESSVPELYGYEVLISS 66
Query: 1043 ISDDKWIKASMAHIPDTSLKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENH 1102
D K S+ +T++ + L
Sbjct: 67 TGKDGKYK-SVYVGEETNI--------------------------------TLNDLKPAM 93
Query: 1103 EYEFRVCAVNAAGQGPWSSSSDII-MCCAP--PCAPKITS 1139
+Y +V A + +G S + + C P P P+I+
Sbjct: 94 DYHAKVQAEYNSIKGTPSEAEIFTTLSCEPDIPNPPRISG 133
Score = 40.0 bits (93), Expect = 0.002
Identities = 15/61 (24%), Positives = 22/61 (36%), Gaps = 4/61 (6%)
Query: 22 YIIERREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPS---ICTT 78
Y + G K Y E + ++ +L DY ++ A K PS I TT
Sbjct: 60 YEVLISSTGKDGKYKSV-YVGEETNITLNDLKPAMDYHAKVQAEYNSIKGTPSEAEIFTT 118
Query: 79 P 79
Sbjct: 119 L 119
Score = 37.3 bits (86), Expect = 0.015
Identities = 20/128 (15%), Positives = 34/128 (26%), Gaps = 41/128 (32%)
Query: 1562 TEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEGKSI 1621
++ L WS P V + Y + +S
Sbjct: 30 QARTVVLTWSPPSSLINGETDESSVPE-------------------LYGYEVLISS---- 66
Query: 1622 GSERGSTAQFLEREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPS 1681
G ++ + Y E + ++ +L DY ++ A K PS
Sbjct: 67 ---TGKDGKY------------KSVYVGEETNITLNDLKPAMDYHAKVQAEYNSIKGTPS 111
Query: 1682 ---ICTTP 1686
I TT
Sbjct: 112 EAEIFTTL 119
Score = 32.7 bits (74), Expect = 0.59
Identities = 6/46 (13%), Positives = 10/46 (21%)
Query: 1321 NSITAKFPFTVPDPPGQPQIVDWDTNNATLMWDRPRTDGGSKIQGY 1366
K + +P D L W P + +
Sbjct: 7 GDEETKAFEALLSNIVKPVASDIQARTVVLTWSPPSSLINGETDES 52
>2e6p_A Obscurin-like protein 1; IG-like domain, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 104
Score = 75.9 bits (187), Expect = 2e-16
Identities = 14/92 (15%), Positives = 31/92 (33%), Gaps = 7/92 (7%)
Query: 481 PEIIVP--LRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTL 538
I+ P + + C ++ +W K +++ S + +G + L
Sbjct: 9 VHILSPQDKVSLTFTTSERVVLTCELSR-VDFPATWYKDGQKVEESELLVVKMDGRKHRL 67
Query: 539 IINSVYGVDADEYVCRAVNKGGVKSTKAELII 570
I+ D+ E+ CR S + +
Sbjct: 68 ILPEAKVQDSGEFECRTEG----VSAFFGVTV 95
Score = 75.9 bits (187), Expect = 2e-16
Identities = 14/92 (15%), Positives = 31/92 (33%), Gaps = 7/92 (7%)
Query: 2088 PEIIVP--LRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTL 2145
I+ P + + C ++ +W K +++ S + +G + L
Sbjct: 9 VHILSPQDKVSLTFTTSERVVLTCELSR-VDFPATWYKDGQKVEESELLVVKMDGRKHRL 67
Query: 2146 IINSVYGVDADEYVCRAVNKGGVKSTKAELII 2177
I+ D+ E+ CR S + +
Sbjct: 68 ILPEAKVQDSGEFECRTEG----VSAFFGVTV 95
Score = 75.1 bits (185), Expect = 4e-16
Identities = 19/90 (21%), Positives = 32/90 (35%), Gaps = 4/90 (4%)
Query: 87 GGEKPDFIV---PLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAG 143
G P I+ L + + L CE + P W ++G+++ V+ G
Sbjct: 4 GSSGPVHILSPQDKVSLTFTTSERVVLTCELSRVDFP-ATWYKDGQKVEESELLVVKMDG 62
Query: 144 GVFRLHFNEVTDVDNGDYTCEAYNSVGFAH 173
RL E D+G++ C F
Sbjct: 63 RKHRLILPEAKVQDSGEFECRTEGVSAFFG 92
Score = 75.1 bits (185), Expect = 4e-16
Identities = 19/90 (21%), Positives = 32/90 (35%), Gaps = 4/90 (4%)
Query: 1694 GGEKPDFIV---PLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAG 1750
G P I+ L + + L CE + P W ++G+++ V+ G
Sbjct: 4 GSSGPVHILSPQDKVSLTFTTSERVVLTCELSRVDFP-ATWYKDGQKVEESELLVVKMDG 62
Query: 1751 GVFRLHFNEVTDVDNGDYTCEAYNSVGFAH 1780
RL E D+G++ C F
Sbjct: 63 RKHRLILPEAKVQDSGEFECRTEGVSAFFG 92
Score = 59.3 bits (144), Expect = 1e-10
Identities = 22/107 (20%), Positives = 31/107 (28%), Gaps = 8/107 (7%)
Query: 1130 APPCAPKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSE 1189
+ P I S +T E +T S W +G +V + +
Sbjct: 6 SGP--VHILSPQDKVSLTFTTSERVVLTCELSR-VDFPATWYKDGQKVEESELLVVKMDG 62
Query: 1190 NQTIYRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYVVDKPSPPQG 1236
+ AK DSG + SA V V D P G
Sbjct: 63 RKHRLILPEAKVQ-DSGEFEC----RTEGVSAFFGVTVQDPSGPSSG 104
Score = 57.0 bits (138), Expect = 7e-10
Identities = 21/101 (20%), Positives = 36/101 (35%), Gaps = 6/101 (5%)
Query: 573 APKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSERHA 632
P + P+ + + F E VV+ + TWY+D + +E V+ R
Sbjct: 7 GPVHILSPQDKVSLTFTTSERVVLTCELSR-VDFPATWYKDGQKVEESELLVVKMDGRKH 65
Query: 633 ILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQISDRPDPP 673
L + +A D+ + E V +Q P P
Sbjct: 66 RLILPEAKVQDSGEFECRTEGVSA--FFGVTVQ---DPSGP 101
Score = 43.9 bits (104), Expect = 3e-05
Identities = 15/102 (14%), Positives = 36/102 (35%), Gaps = 7/102 (6%)
Query: 183 PPRIDRMPN--ALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYII 240
P I + +L + + + + K+G+ V+ + +
Sbjct: 8 PVHILSPQDKVSLTFTTSERVVLTCELSRVDF-PATWYKDGQKVEESELLVVKMDGRKHR 66
Query: 241 IFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPIG 282
+ + E + +D+G++ + VS F + + GP G
Sbjct: 67 LILPEAKVQDSGEFEC----RTEGVSAFFGVTVQDPSGPSSG 104
Score = 43.9 bits (104), Expect = 3e-05
Identities = 15/102 (14%), Positives = 36/102 (35%), Gaps = 7/102 (6%)
Query: 1790 PPRIDRMPN--ALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYII 1847
P I + +L + + + + K+G+ V+ + +
Sbjct: 8 PVHILSPQDKVSLTFTTSERVVLTCELSRVDF-PATWYKDGQKVEESELLVVKMDGRKHR 66
Query: 1848 IFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPIG 1889
+ + E + +D+G++ + VS F + + GP G
Sbjct: 67 LILPEAKVQDSGEFEC----RTEGVSAFFGVTVQDPSGPSSG 104
Score = 36.2 bits (84), Expect = 0.017
Identities = 14/96 (14%), Positives = 35/96 (36%), Gaps = 19/96 (19%)
Query: 1401 SSNSEPGKQSGPVIVEEQPNKPVMDLSGVRDITVKAGED--FSIHVPFMAFPQPAAFWFA 1458
SS S PV + +K +T E + + + A W+
Sbjct: 2 SSGSSG-----PVHILSPQDK--------VSLTFTTSERVVLTCEL---SRVDFPATWYK 45
Query: 1459 NDSIIDDSDTRVHKQLTMNSASLVVKNSQRSDGGQY 1494
+ +++S+ + ++ L++ ++ D G++
Sbjct: 46 DGQKVEESE-LLVVKMDGRKHRLILPEAKVQDSGEF 80
>3teu_A Fibcon; FN3 domain, fibronectin TPYE III domain, consensus design,
S de novo protein; HET: DIO; 1.00A {Synthetic}
Length = 98
Score = 74.8 bits (184), Expect = 4e-16
Identities = 24/99 (24%), Positives = 37/99 (37%), Gaps = 9/99 (9%)
Query: 671 DPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSW---IRVGNTRFTTM 727
D P V ++ S+ + W P + IT Y + + V + T++
Sbjct: 3 DAPTDLQVTNVTDTSITVSWTPP----SATITGYRITYTPSNGPGEPKELTVPPSS-TSV 57
Query: 728 AITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKDTF 766
ITGL+PG +Y VYA S P + T
Sbjct: 58 TITGLTPGVEYVVSVYALKDNQESPPLVGT-QTTGGHHH 95
Score = 69.4 bits (170), Expect = 4e-14
Identities = 25/90 (27%), Positives = 39/90 (43%), Gaps = 6/90 (6%)
Query: 278 GPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWI-CISTTCHDTTF 336
P L V+ +T + T+ W PP +T Y + + P ++ T+
Sbjct: 3 DAPTD-LQVTNVTDTSITVSWTPPSAT----ITGYRITYTPSNGPGEPKELTVPPSSTSV 57
Query: 337 IVQGLTEGQEYLFHVMAVNENGMGPPLEGI 366
+ GLT G EY+ V A+ +N PPL G
Sbjct: 58 TITGLTPGVEYVVSVYALKDNQESPPLVGT 87
Score = 69.4 bits (170), Expect = 4e-14
Identities = 25/90 (27%), Positives = 39/90 (43%), Gaps = 6/90 (6%)
Query: 1885 GPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWI-CISTTCHDTTF 1943
P L V+ +T + T+ W PP +T Y + + P ++ T+
Sbjct: 3 DAPTD-LQVTNVTDTSITVSWTPPSAT----ITGYRITYTPSNGPGEPKELTVPPSSTSV 57
Query: 1944 IVQGLTEGQEYLFHVMAVNENGMGPPLEGI 1973
+ GLT G EY+ V A+ +N PPL G
Sbjct: 58 TITGLTPGVEYVVSVYALKDNQESPPLVGT 87
Score = 65.1 bits (159), Expect = 1e-12
Identities = 24/100 (24%), Positives = 35/100 (35%), Gaps = 9/100 (9%)
Query: 1232 SPPQGPLDVSDITPESCSLSWKPPLDDGGSPITNYVVEKYESATGFWSKLSSFVRSPA-- 1289
P L V+++T S ++SW PP + IT Y + Y + G V +
Sbjct: 3 DAPTD-LQVTNVTDTSITVSWTPP----SATITGYRIT-YTPSNGPGEPKELTVPPSSTS 56
Query: 1290 YDVFGLETNRQYRFRVRAENQYGVSEPLELDNSITAKFPF 1329
+ GL +Y V A S PL T
Sbjct: 57 VTITGLTPGVEYVVSVYALKDNQESPPLVG-TQTTGGHHH 95
Score = 64.4 bits (157), Expect = 2e-12
Identities = 25/93 (26%), Positives = 33/93 (35%), Gaps = 12/93 (12%)
Query: 898 VLDRPHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTK---VSSY 954
+LD P +L S+T+ WTPP + IT Y + N K V
Sbjct: 1 MLD---APTDLQVTNVTDTSITVSWTPPS----ATITGYRITYTPSNGPGEPKELTVPPS 53
Query: 955 VTTPFVRVRNLAIGSTYEFRVMAENQYGLSKPA 987
T+ V + L G Y V A S P
Sbjct: 54 STS--VTITGLTPGVEYVVSVYALKDNQESPPL 84
Score = 62.8 bits (153), Expect = 7e-12
Identities = 20/89 (22%), Positives = 30/89 (33%), Gaps = 4/89 (4%)
Query: 379 SPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQIN 438
P VT V + +SW P + I GY I + + + +
Sbjct: 3 DAPTDLQVTNVTDTSITVSWTPP----SATITGYRITYTPSNGPGEPKELTVPPSSTSVT 58
Query: 439 IPNLIEGRQYEFRVYAQNEAGLSLPSSAS 467
I L G +Y VYA + S P +
Sbjct: 59 ITGLTPGVEYVVSVYALKDNQESPPLVGT 87
Score = 62.8 bits (153), Expect = 7e-12
Identities = 20/89 (22%), Positives = 30/89 (33%), Gaps = 4/89 (4%)
Query: 1986 SPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQIN 2045
P VT V + +SW P + I GY I + + + +
Sbjct: 3 DAPTDLQVTNVTDTSITVSWTPP----SATITGYRITYTPSNGPGEPKELTVPPSSTSVT 58
Query: 2046 IPNLIEGRQYEFRVYAQNEAGLSLPSSAS 2074
I L G +Y VYA + S P +
Sbjct: 59 ITGLTPGVEYVVSVYALKDNQESPPLVGT 87
Score = 49.7 bits (119), Expect = 2e-07
Identities = 19/116 (16%), Positives = 32/116 (27%), Gaps = 36/116 (31%)
Query: 1003 GAPGAPKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLK 1062
AP + + T+ SI++ W+ P + I Y + + K TS+
Sbjct: 3 DAPTDLQVTNVTDTSITVSWTPPS----ATITGYRITYTPSNGPGEPKELTVPPSSTSV- 57
Query: 1063 YVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGP 1118
+T L EY V A+ + P
Sbjct: 58 -------------------------------TITGLTPGVEYVVSVYALKDNQESP 82
Score = 45.9 bits (109), Expect = 5e-06
Identities = 11/53 (20%), Positives = 17/53 (32%)
Query: 22 YIIERREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPS 74
Y I G K S ++ L G +Y + A+ +S P
Sbjct: 32 YRITYTPSNGPGEPKELTVPPSSTSVTITGLTPGVEYVVSVYALKDNQESPPL 84
Score = 42.4 bits (100), Expect = 8e-05
Identities = 17/123 (13%), Positives = 32/123 (26%), Gaps = 49/123 (39%)
Query: 1559 VDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEG 1618
+ T+ SI++ W+ P + I Y + + K
Sbjct: 11 TNVTDTSITVSWTPPS----ATITGYRITYTPSNGPGEPK-------------------- 46
Query: 1619 KSIGSERGSTAQFLEREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKS 1678
E V + S ++ L G +Y + A+ +S
Sbjct: 47 --------------ELTVPPS-----------STSVTITGLTPGVEYVVSVYALKDNQES 81
Query: 1679 EPS 1681
P
Sbjct: 82 PPL 84
Score = 28.2 bits (63), Expect = 8.8
Identities = 10/48 (20%), Positives = 17/48 (35%), Gaps = 4/48 (8%)
Query: 1333 DPPGQPQIVDWDTNNATLMWDRPRTDGGSKIQGYKMLLKTPTGELPTT 1380
D P Q+ + + T+ W P + I GY++ G
Sbjct: 3 DAPTDLQVTNVTDTSITVSWTPPS----ATITGYRITYTPSNGPGEPK 46
>1gxe_A Myosin binding protein C, cardiac-type; cytoskeleton, muscle, IGI,
thick filament, immunoglobulin domain; NMR {Homo sapiens}
SCOP: b.1.1.4
Length = 139
Score = 75.9 bits (186), Expect = 6e-16
Identities = 34/128 (26%), Positives = 55/128 (42%), Gaps = 33/128 (25%)
Query: 1134 APKITSDLSIR---DMTVLAGEEFTITVPFSGRPKPTPIWTVNGDE-------------- 1176
PKI D R + V+AG + + VP SG P PT IW +
Sbjct: 13 PPKIHLDCPGRIPDTIVVVAGNKLRLDVPISGDPAPTVIWQKAITQGNKAPARPAPDAPE 72
Query: 1177 ---------------VSPDGRIKFETSENQTIYRNKSAKRATDSGSYTIQLVNTVGSDSA 1221
+GR++ ET+++++I+ + A++ D G YT+ + N VG D
Sbjct: 73 DTGDSDEWVFDKKLLCETEGRVRVETTKDRSIFTVEGAEKE-DEGVYTVTVKNPVGEDQV 131
Query: 1222 SCKVYVVD 1229
+ V V+D
Sbjct: 132 NLTVKVID 139
Score = 69.8 bits (170), Expect = 8e-14
Identities = 26/127 (20%), Positives = 46/127 (36%), Gaps = 31/127 (24%)
Query: 573 APKFNVPP--RFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNE--------------- 615
PK ++ R DT G + + +P +G P P + W +
Sbjct: 13 PPKIHLDCPGRIPDTIVVVAGNKLRLDVPISGDPAPTVIWQKAITQGNKAPARPAPDAPE 72
Query: 616 --------------VIESGGHFHVETSERHAILTIRDASNVDTAPYRVVAENDLGMDSAI 661
+ E+ G VET++ +I T+ A D Y V +N +G D
Sbjct: 73 DTGDSDEWVFDKKLLCETEGRVRVETTKDRSIFTVEGAEKEDEGVYTVTVKNPVGEDQVN 132
Query: 662 VKIQISD 668
+ +++ D
Sbjct: 133 LTVKVID 139
Score = 65.9 bits (160), Expect = 1e-12
Identities = 26/124 (20%), Positives = 45/124 (36%), Gaps = 30/124 (24%)
Query: 1417 EQPNKPVMDLSGV--RDITVKAGEDFSIHVPFMAFPQPAAFWF----------------- 1457
++P K +D G I V AG + VP P P W
Sbjct: 11 QEPPKIHLDCPGRIPDTIVVVAGNKLRLDVPISGDPAPTVIWQKAITQGNKAPARPAPDA 70
Query: 1458 -----------ANDSIIDDSDTRVHKQLTMNSASLVVKNSQRSDGGQYRLQLKNPAGFDT 1506
+ ++ +++ RV + T + + V+ +++ D G Y + +KNP G D
Sbjct: 71 PEDTGDSDEWVFDKKLLCETEGRVRVETTKDRSIFTVEGAEKEDEGVYTVTVKNPVGEDQ 130
Query: 1507 ATLH 1510
L
Sbjct: 131 VNLT 134
Score = 63.6 bits (154), Expect = 1e-11
Identities = 25/126 (19%), Positives = 33/126 (26%), Gaps = 34/126 (26%)
Query: 89 EKPDFIVPL-----KDLVVPLGKLLTLQCEATGTPVPKCRWLRNGRE------------- 130
E P + +VV G L L +G P P W + +
Sbjct: 12 EPPKIHLDCPGRIPDTIVVVAGNKLRLDVPISGDPAPTVIWQKAITQGNKAPARPAPDAP 71
Query: 131 ----------------ISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHT 174
+ R RVET D G YT N VG
Sbjct: 72 EDTGDSDEWVFDKKLLCETEGRVRVETTKDRSIFTVEGAEKEDEGVYTVTVKNPVGEDQV 131
Query: 175 SSRVKI 180
+ VK+
Sbjct: 132 NLTVKV 137
Score = 63.6 bits (154), Expect = 1e-11
Identities = 25/126 (19%), Positives = 33/126 (26%), Gaps = 34/126 (26%)
Query: 1696 EKPDFIVPL-----KDLVVPLGKLLTLQCEATGTPVPKCRWLRNGRE------------- 1737
E P + +VV G L L +G P P W + +
Sbjct: 12 EPPKIHLDCPGRIPDTIVVVAGNKLRLDVPISGDPAPTVIWQKAITQGNKAPARPAPDAP 71
Query: 1738 ----------------ISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHT 1781
+ R RVET D G YT N VG
Sbjct: 72 EDTGDSDEWVFDKKLLCETEGRVRVETTKDRSIFTVEGAEKEDEGVYTVTVKNPVGEDQV 131
Query: 1782 SSRVKI 1787
+ VK+
Sbjct: 132 NLTVKV 137
Score = 55.1 bits (132), Expect = 9e-09
Identities = 23/126 (18%), Positives = 43/126 (34%), Gaps = 34/126 (26%)
Query: 183 PPRID-----RMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNG---------------- 221
PP+I R+P+ + + G+ ++ + +GD V K
Sbjct: 13 PPKIHLDCPGRIPDTIVVVAGNKLRLDVPISGDPAPTVIWQKAITQGNKAPARPAPDAPE 72
Query: 222 -------------RVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGT 268
+ +++ R + D I ++ KED G YTV + N G
Sbjct: 73 DTGDSDEWVFDKKLLCETEGRVRVETTKDRSIFTVEGAEKEDEGVYTVTVKNPVGEDQVN 132
Query: 269 FTINIT 274
T+ +
Sbjct: 133 LTVKVI 138
Score = 55.1 bits (132), Expect = 9e-09
Identities = 23/126 (18%), Positives = 43/126 (34%), Gaps = 34/126 (26%)
Query: 1790 PPRID-----RMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNG---------------- 1828
PP+I R+P+ + + G+ ++ + +GD V K
Sbjct: 13 PPKIHLDCPGRIPDTIVVVAGNKLRLDVPISGDPAPTVIWQKAITQGNKAPARPAPDAPE 72
Query: 1829 -------------RVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGT 1875
+ +++ R + D I ++ KED G YTV + N G
Sbjct: 73 DTGDSDEWVFDKKLLCETEGRVRVETTKDRSIFTVEGAEKEDEGVYTVTVKNPVGEDQVN 132
Query: 1876 FTINIT 1881
T+ +
Sbjct: 133 LTVKVI 138
Score = 51.7 bits (123), Expect = 2e-07
Identities = 15/126 (11%), Positives = 29/126 (23%), Gaps = 34/126 (26%)
Query: 480 APEIIVPL-----RNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSA--------- 525
P+I + + + + I+G P PT+ W K + +
Sbjct: 13 PPKIHLDCPGRIPDTIVVVAGNKLRLDVPISGDPAPTVIWQKAITQGNKAPARPAPDAPE 72
Query: 526 --------------------RHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTK 565
R + D + D Y N G
Sbjct: 73 DTGDSDEWVFDKKLLCETEGRVRVETTKDRSIFTVEGAEKEDEGVYTVTVKNPVGEDQVN 132
Query: 566 AELIIM 571
+ ++
Sbjct: 133 LTVKVI 138
Score = 51.7 bits (123), Expect = 2e-07
Identities = 15/126 (11%), Positives = 29/126 (23%), Gaps = 34/126 (26%)
Query: 2087 APEIIVPL-----RNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSA--------- 2132
P+I + + + + I+G P PT+ W K + +
Sbjct: 13 PPKIHLDCPGRIPDTIVVVAGNKLRLDVPISGDPAPTVIWQKAITQGNKAPARPAPDAPE 72
Query: 2133 --------------------RHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTK 2172
R + D + D Y N G
Sbjct: 73 DTGDSDEWVFDKKLLCETEGRVRVETTKDRSIFTVEGAEKEDEGVYTVTVKNPVGEDQVN 132
Query: 2173 AELIIM 2178
+ ++
Sbjct: 133 LTVKVI 138
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody,
immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S
3cm9_S 3chn_J 3cm9_J
Length = 585
Score = 82.7 bits (203), Expect = 7e-16
Identities = 67/514 (13%), Positives = 137/514 (26%), Gaps = 63/514 (12%)
Query: 214 EVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINI 273
VS GR ++ + ++ I ++ ++D+G Y L +S +S ++ +
Sbjct: 55 YVSSKYAGRANLTNFP-----ENGTFVVNIAQLSQDDSGRYKCGLGINSRGLSFDVSLEV 109
Query: 274 TGLPGPPIGPLDVSEITKHTCTLHWN-------PPKY---DGGLKVTHYVVERRDISMPH 323
+ PG + T T++ K GL + ++ +
Sbjct: 110 SQGPGLLNDTKVYTVDLGRTVTINCPFKTENAQKRKSLYKQIGLYPVLVIDSSGYVNPNY 169
Query: 324 WICISTTCHDT-----TFIVQGLTEGQE--YLFHVMAVNENGMGPPLEGINPIKAKSPYD 376
I T + ++ L YL + + + K +
Sbjct: 170 TGRIRLDIQGTGQLLFSVVINQLRLSDAGQYLCQA----GDDSNSNKKNADLQVLKPEPE 225
Query: 377 KPSPP---GIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICA 433
+ +G + N++ G + R+ +
Sbjct: 226 LVYEDLRGSVTFHCALGPEVANVAKFLCRQSSGENCDVVVNTLGKRAPAFEGRILLNPQD 285
Query: 434 PS---QINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNA 490
+ I L + + A ++ L S + I
Sbjct: 286 KDGSFSVVITGLRKEDAGRYLCGAHSDGQLQEGSPIQAWQLFVNEE----STIPRSPTVV 341
Query: 491 NAIQNHNAQFQCTITGCPKPTISWL-----------------KGSREITPSARHHIFAEG 533
+ + C +I + +G + R + E
Sbjct: 342 KGVAGSSVAVLCPYNRKESKSIKYWCLWEGAQNGRCPLLVDSEGWVKAQYEGRLSLLEEP 401
Query: 534 D--TYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPRFRDTAYFDKG 591
T+T+I+N + DA Y C ++T II P VP
Sbjct: 402 GNGTFTVILNQLTSRDAGFYWCLTNGDTLWRTTVEIKIIEGEPNLKVPGNVTAVLGETLK 461
Query: 592 ENVVVKIPFTGYPKPKITWYRD-------NEVIESGGHFHVETSERHAILTIRDASNVDT 644
F+ Y K W + S + + + R LT+ + D
Sbjct: 462 VPCHFPCKFSSYEKYWCKWNNTGCQALPSQDEGPSKAFVNCDENSRLVSLTLNLVTRADE 521
Query: 645 APYR-VVAENDLGMDSAIVKIQISDRPDPPQFPT 677
Y V + ++A V + + +R
Sbjct: 522 GWYWCGVKQGHFYGETAAVYVAVEERKAAGSRDV 555
Score = 81.6 bits (200), Expect = 1e-15
Identities = 67/570 (11%), Positives = 138/570 (24%), Gaps = 78/570 (13%)
Query: 1705 KDLVVPLGKLLTLQC---EATGTPVPKCRWLRNG------------REISSGARYRV--- 1746
+++ G +++ C + + W R G +SS R
Sbjct: 8 EEVNSVEGNSVSITCYYPPTSVNRHTRKYWCRQGARGGCITLISSEGYVSSKYAGRANLT 67
Query: 1747 -ETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMPNALYIPEG 1805
G F ++ +++ D+G Y C + +++ P + + G
Sbjct: 68 NFPENGTFVVNIAQLSQDDSGRYKCGLGINSRGLSFDVSLEVSQGPGLLNDTKVYTVDLG 127
Query: 1806 DN------------TKVKIFY--AGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIF-- 1849
K K Y G P+ V + R + + ++F
Sbjct: 128 RTVTINCPFKTENAQKRKSLYKQIGLYPVLVIDSSGYVNPNYTGRIRLDIQGTGQLLFSV 187
Query: 1850 -IKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPP 1908
I ++R DAG Y + S S + + + +T C L
Sbjct: 188 VINQLRLSDAGQYLCQAGDDSNSNKKNADLQVLKPEPELVYEDLRGSVTF-HCALGPEVA 246
Query: 1909 KYD------GGLKVTHYVVERRDISMPHW-----ICISTTCHDTTFIVQGLTEGQEYLFH 1957
+ VV P + + + ++ GL + +
Sbjct: 247 NVAKFLCRQSSGENCDVVVNTLGKRAPAFEGRILLNPQDKDGSFSVVITGLRKEDAGRYL 306
Query: 1958 VMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFV------------NLSW 2005
A ++ + + V G W
Sbjct: 307 CGAHSDGQLQEGSPIQAWQLFVNEESTIPRSPTVVKGVAGSSVAVLCPYNRKESKSIKYW 366
Query: 2006 DKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQ---INIPNLIEGRQYEFRVYAQ 2062
R + V + R+++ + + + L +
Sbjct: 367 CLWEGAQNGRCPLLVDSEGWVKAQYEGRLSLLEEPGNGTFTVILNQLTSRDAGFYWCLTN 426
Query: 2063 NEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWL 2122
+ ++ + +P + L + F C + K W
Sbjct: 427 GDTLWR--TTVEIKIIEGEPNLKVPGNVTAVLGETLKVP---CHFPCKFSSYEKYWCKWN 481
Query: 2123 KGSREITPSAR-------HHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAEL 2175
+ PS + +L +N V D Y C T A
Sbjct: 482 NTGCQALPSQDEGPSKAFVNCDENSRLVSLTLNLVTRADEGWYWCGVKQGHFYGETAAVY 541
Query: 2176 IIMTAPKFNVPPRFRDTAYFESDVVVVVCV 2205
+ + K ++D V
Sbjct: 542 VAVEERKAAGSRDVSLA---KADAAPDEKV 568
Score = 80.4 bits (197), Expect = 4e-15
Identities = 65/552 (11%), Positives = 134/552 (24%), Gaps = 75/552 (13%)
Query: 98 KDLVVPLGKLLTLQC---EATGTPVPKCRWLRNG------------REISSGARYRV--- 139
+++ G +++ C + + W R G +SS R
Sbjct: 8 EEVNSVEGNSVSITCYYPPTSVNRHTRKYWCRQGARGGCITLISSEGYVSSKYAGRANLT 67
Query: 140 -ETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMPNALYIPEG 198
G F ++ +++ D+G Y C + +++ P + + G
Sbjct: 68 NFPENGTFVVNIAQLSQDDSGRYKCGLGINSRGLSFDVSLEVSQGPGLLNDTKVYTVDLG 127
Query: 199 DN------------TKVKIFY--AGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIF-- 242
K K Y G P+ V + R + + ++F
Sbjct: 128 RTVTINCPFKTENAQKRKSLYKQIGLYPVLVIDSSGYVNPNYTGRIRLDIQGTGQLLFSV 187
Query: 243 -IKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPP 301
I ++R DAG Y + S S + + + +T C L
Sbjct: 188 VINQLRLSDAGQYLCQAGDDSNSNKKNADLQVLKPEPELVYEDLRGSVTF-HCALGPEVA 246
Query: 302 KYD------GGLKVTHYVVERRDISMPHW-----ICISTTCHDTTFIVQGLTEGQEYLFH 350
+ VV P + + + ++ GL + +
Sbjct: 247 NVAKFLCRQSSGENCDVVVNTLGKRAPAFEGRILLNPQDKDGSFSVVITGLRKEDAGRYL 306
Query: 351 VMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFV------------NLSW 398
A ++ + + V G W
Sbjct: 307 CGAHSDGQLQEGSPIQAWQLFVNEESTIPRSPTVVKGVAGSSVAVLCPYNRKESKSIKYW 366
Query: 399 DKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQ---INIPNLIEGRQYEFRVYAQ 455
R + V + R+++ + + + L +
Sbjct: 367 CLWEGAQNGRCPLLVDSEGWVKAQYEGRLSLLEEPGNGTFTVILNQLTSRDAGFYWCLTN 426
Query: 456 NEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWL 515
+ ++ + +P + L + F C + K W
Sbjct: 427 GDTLWR--TTVEIKIIEGEPNLKVPGNVTAVLGETLKVP---CHFPCKFSSYEKYWCKWN 481
Query: 516 KGSREITPSAR-------HHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAEL 568
+ PS + +L +N V D Y C T A
Sbjct: 482 NTGCQALPSQDEGPSKAFVNCDENSRLVSLTLNLVTRADEGWYWCGVKQGHFYGETAAVY 541
Query: 569 IIMTAPKFNVPP 580
+ + K
Sbjct: 542 VAVEERKAAGSR 553
Score = 78.9 bits (193), Expect = 1e-14
Identities = 70/579 (12%), Positives = 135/579 (23%), Gaps = 118/579 (20%)
Query: 1426 LSGVRDITVKAGEDFSIH---VPFMAFPQPAAFWF-------------ANDSIIDDSDTR 1469
+ G ++ G SI P +W + + R
Sbjct: 4 IFGPEEVNSVEGNSVSITCYYPPTSVNRHTRKYWCRQGARGGCITLISSEGYVSSKYAGR 63
Query: 1470 VHKQLTMNSASLVVK--NSQRSDGGQYRLQLKNPAGFDTATLHSRLRTLPDSVNPRCHLP 1527
+ + + VV + D G+Y+ L + + + + P +N
Sbjct: 64 ANLTNFPENGTFVVNIAQLSQDDSGRYKCGLGINSRGLSFDVSLEVSQGPGLLNDTKVYT 123
Query: 1528 ---SSTSKERPKFPTHPNHQPWLKWARASLTSKGV--------DSTEDSISLVWSKPRH- 1575
T F T + + + L V + I L
Sbjct: 124 VDLGRTVTINCPFKTENAQKRKSLYKQIGLYPVLVIDSSGYVNPNYTGRIRLDIQGTGQL 183
Query: 1576 ------------DGGSPIQRY--IVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEGKSI 1621
D G +Y S+ K + + S+
Sbjct: 184 LFSVVINQLRLSDAG----QYLCQAGDDSNSNKKNADLQVLKPEPELVY----EDLRGSV 235
Query: 1622 ------GSERGSTAQFLEREVGG-----AIWLKCNDYNVLECSFSVLNLVEGNDYEFRII 1670
G E + A+FL R+ G + E + + + I
Sbjct: 236 TFHCALGPEVANVAKFLCRQSSGENCDVVVNTLGKRAPAFEGRILLNPQDKDGSFSVVIT 295
Query: 1671 AVNA---------IGKSEPSICTTPVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEA 1721
+ +P++ + E+ + G + + C
Sbjct: 296 GLRKEDAGRYLCGAHSDGQLQEGSPIQAWQLFVNEESTIPRSPTVVKGVAGSSVAVLCPY 355
Query: 1722 TGTPVPKCR-WLRNGREISSGARYRVETAG------------------GVFRLHFNEVTD 1762
+ W + V++ G G F + N++T
Sbjct: 356 NRKESKSIKYWCLWEGAQNGRCPLLVDSEGWVKAQYEGRLSLLEEPGNGTFTVILNQLTS 415
Query: 1763 VDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYA------- 1815
D G Y C + T I P + N + G+ KV +
Sbjct: 416 RDAGFYWCLTNGDTLWRTTVEIKIIEGEPNLKVPGN-VTAVLGETLKVPCHFPCKFSSYE 474
Query: 1816 ---------GDQPMEVSLTKNGRVVQSDD--RFKFTVLDDYIIIFIKEIRKEDAGDYTVN 1864
G Q + + + D ++ + + + D G Y
Sbjct: 475 KYWCKWNNTGCQALPSQDEGPSKAFVNCDENSRLVSLT-------LNLVTRADEGWYWCG 527
Query: 1865 LSNSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTL 1903
+ T + + G DVS
Sbjct: 528 VKQGHFYGE-TAAVYVAVEERKAAGSRDVSLAKADAAPD 565
Score = 74.3 bits (181), Expect = 3e-13
Identities = 38/306 (12%), Positives = 92/306 (30%), Gaps = 37/306 (12%)
Query: 454 AQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLR-NANAIQNHNAQFQCTITGCPKPTI 512
A +++ + ++ ++ + + + V + A+F C + +
Sbjct: 204 AGDDSNSNKKNADLQVLKPEPELVYEDLRGSVTFHCALGPEVANVAKFLCRQSSGENCDV 263
Query: 513 SWLK-GSREITPSARHHIF--AEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELI 569
G R R + + +++++I + DA Y+C A + G ++
Sbjct: 264 VVNTLGKRAPAFEGRILLNPQDKDGSFSVVITGLRKEDAGRYLCGAHSDGQLQEGSPIQA 323
Query: 570 -IMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNE---------VIES 619
+ + + PR G +V V P+ I ++ E +++S
Sbjct: 324 WQLFVNEESTIPRSPTVVKGVAGSSVAVLCPYNRKESKSIKYWCLWEGAQNGRCPLLVDS 383
Query: 620 GGHFHVETSERHAI----------LTIRDASNVDTAPYRVVAENDLGMDSAIVKIQISDR 669
G + R ++ + + ++ D Y + D + + I
Sbjct: 384 EGWVKAQYEGRLSLLEEPGNGTFTVILNQLTSRDAGFYWCLTNGDTLWRTTVEIKIIEGE 443
Query: 670 PDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSWIRVGNTRFTTMAI 729
P+ V + ++L + P W + NT +
Sbjct: 444 PNLKVPGNVTAVLGETLKVPCHFPCKFSSYEKY-------------WCKWNNTGCQALPS 490
Query: 730 TGLSPG 735
P
Sbjct: 491 QDEGPS 496
Score = 69.3 bits (168), Expect = 9e-12
Identities = 33/267 (12%), Positives = 64/267 (23%), Gaps = 46/267 (17%)
Query: 67 AIGKSEPSICTTPVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCR-WL 125
+P++ + E+ + G + + C + W
Sbjct: 308 GAHSDGQLQEGSPIQAWQLFVNEESTIPRSPTVVKGVAGSSVAVLCPYNRKESKSIKYWC 367
Query: 126 RNGREISSGARYRVETAG------------------GVFRLHFNEVTDVDNGDYTCEAYN 167
+ V++ G G F + N++T D G Y C
Sbjct: 368 LWEGAQNGRCPLLVDSEGWVKAQYEGRLSLLEEPGNGTFTVILNQLTSRDAGFYWCLTNG 427
Query: 168 SVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYA----------------GDQ 211
+ T I P + N + G+ KV + G Q
Sbjct: 428 DTLWRTTVEIKIIEGEPNLKVPGN-VTAVLGETLKVPCHFPCKFSSYEKYWCKWNNTGCQ 486
Query: 212 PMEVSLTKNGRVVQSDD--RFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTF 269
+ + + D ++ + + + D G Y + T
Sbjct: 487 ALPSQDEGPSKAFVNCDENSRLVSLT-------LNLVTRADEGWYWCGVKQGHFYGE-TA 538
Query: 270 TINITGLPGPPIGPLDVSEITKHTCTL 296
+ + G DVS
Sbjct: 539 AVYVAVEERKAAGSRDVSLAKADAAPD 565
Score = 61.2 bits (147), Expect = 3e-09
Identities = 41/309 (13%), Positives = 74/309 (23%), Gaps = 59/309 (19%)
Query: 498 AQFQCTI---TGCPKPTISWLKG--------------SREITPSARHHI--FAEGDTYTL 538
C + W + + R ++ F E T+ +
Sbjct: 18 VSITCYYPPTSVNRHTRKYWCRQGARGGCITLISSEGYVSSKYAGRANLTNFPENGTFVV 77
Query: 539 IINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVKI 598
I + D+ Y C S L + P + D G V +
Sbjct: 78 NIAQLSQDDSGRYKCGLGINSRGLSFDVSLEVSQGPGLLNDTKV---YTVDLGRTVTINC 134
Query: 599 PFTGYPKPKIT-WYRDN-----EVIESGGHFHVETSERHAI-----------LTIRDASN 641
PF K Y+ VI+S G+ + + R + + I
Sbjct: 135 PFKTENAQKRKSLYKQIGLYPVLVIDSSGYVNPNYTGRIRLDIQGTGQLLFSVVINQLRL 194
Query: 642 VDTAPYRVVAENDLGMDSAIVKIQISDRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNI 701
D Y A +D + +Q+ + + S+
Sbjct: 195 SDAGQYLCQAGDDSNSNKKNADLQVLKPEPELVYEDLR----GSVTFHCALGPEVANVAK 250
Query: 702 TNYIVEKREHPMSSWIRVG------NTRFT----------TMAITGLSPGHQYEFRVYAE 745
E+ +G R ++ ITGL + A
Sbjct: 251 FLCRQSSGENCDVVVNTLGKRAPAFEGRILLNPQDKDGSFSVVITGLRKEDAGRYLCGAH 310
Query: 746 NVYGRSDPS 754
+ + S
Sbjct: 311 SDGQLQEGS 319
Score = 57.7 bits (138), Expect = 3e-08
Identities = 40/242 (16%), Positives = 77/242 (31%), Gaps = 33/242 (13%)
Query: 89 EKPDFIVPLKDLVVPLGKLLTLQCEAT--GTPVPKCRWLRNG------------REISSG 134
+ P + K V LG+ +T+ C K + + G +
Sbjct: 111 QGPGLLNDTKVYTVDLGRTVTINCPFKTENAQKRKSLYKQIGLYPVLVIDSSGYVNPNYT 170
Query: 135 ARYRVE---TAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMPN 191
R R++ T +F + N++ D G Y C+A + ++ +++ P +
Sbjct: 171 GRIRLDIQGTGQLLFSVVINQLRLSDAGQYLCQAGDDSNSNKKNADLQVLKPEPELVYED 230
Query: 192 ---------ALYIPEGDNTKVKIFYAGDQPMEVSLTKNG-RVVQSDDRFKFTVLDDY--I 239
AL + K + + +V + G R + R D
Sbjct: 231 LRGSVTFHCALGPEVANVAKFLCRQSSGENCDVVVNTLGKRAPAFEGRILLNPQDKDGSF 290
Query: 240 IIFIKEIRKEDAGDYTVNLSNSSG----SVSGTFTINITGLPGPPIGPLDVSEITKHTCT 295
+ I +RKEDAG Y + S + + + P P V + +
Sbjct: 291 SVVITGLRKEDAGRYLCGAHSDGQLQEGSPIQAWQLFVNEESTIPRSPTVVKGVAGSSVA 350
Query: 296 LH 297
+
Sbjct: 351 VL 352
Score = 57.7 bits (138), Expect = 3e-08
Identities = 40/242 (16%), Positives = 77/242 (31%), Gaps = 33/242 (13%)
Query: 1696 EKPDFIVPLKDLVVPLGKLLTLQCEAT--GTPVPKCRWLRNG------------REISSG 1741
+ P + K V LG+ +T+ C K + + G +
Sbjct: 111 QGPGLLNDTKVYTVDLGRTVTINCPFKTENAQKRKSLYKQIGLYPVLVIDSSGYVNPNYT 170
Query: 1742 ARYRVE---TAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMPN 1798
R R++ T +F + N++ D G Y C+A + ++ +++ P +
Sbjct: 171 GRIRLDIQGTGQLLFSVVINQLRLSDAGQYLCQAGDDSNSNKKNADLQVLKPEPELVYED 230
Query: 1799 ---------ALYIPEGDNTKVKIFYAGDQPMEVSLTKNG-RVVQSDDRFKFTVLDDY--I 1846
AL + K + + +V + G R + R D
Sbjct: 231 LRGSVTFHCALGPEVANVAKFLCRQSSGENCDVVVNTLGKRAPAFEGRILLNPQDKDGSF 290
Query: 1847 IIFIKEIRKEDAGDYTVNLSNSSG----SVSGTFTINITGLPGPPIGPLDVSEITKHTCT 1902
+ I +RKEDAG Y + S + + + P P V + +
Sbjct: 291 SVVITGLRKEDAGRYLCGAHSDGQLQEGSPIQAWQLFVNEESTIPRSPTVVKGVAGSSVA 350
Query: 1903 LH 1904
+
Sbjct: 351 VL 352
Score = 48.1 bits (113), Expect = 3e-05
Identities = 57/513 (11%), Positives = 119/513 (23%), Gaps = 87/513 (16%)
Query: 1144 RDMTVLAGEEFTIT---VPFSGRPKPTPIW--------------TVNGDEVSPDGRIKFE 1186
++ + G +IT P S W + GR
Sbjct: 8 EEVNSVEGNSVSITCYYPPTSVNRHTRKYWCRQGARGGCITLISSEGYVSSKYAGRANLT 67
Query: 1187 TS-ENQTIYRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYVVDKPSPPQGPLDVSDITP 1245
EN T N + DSG Y L S + V P +
Sbjct: 68 NFPENGTFVVNIAQLSQDDSGRYKCGLGINSRGLSFDVSLEVSQGPGLLNDTKVYTVDLG 127
Query: 1246 ES------CSLSWKPPL----DDGGSPITNYVVEKYESATGFWSKLSSFVRSPAYDVFGL 1295
+ G + + ++ ++ +F +
Sbjct: 128 RTVTINCPFKTENAQKRKSLYKQIGLYPVLVIDSSGYVNPNYTGRIRLDIQGTGQLLFSV 187
Query: 1296 E-TNRQY----RFRVRAENQYGVSEPLELDNSITAKFPFTVPDPPGQPQIV----DWDTN 1346
+ ++ +A + ++ D + P V + +
Sbjct: 188 VINQLRLSDAGQYLCQAGDDSNSNK-KNADLQVLKPEPELVYEDLRGSVTFHCALGPEVA 246
Query: 1347 NATLMWDRPRTDGGSKIQGYKMLLKTPTGELPTTIWSKIRPTSSTVYCKDTTMN------ 1400
N R + + + + P E + + + S +V
Sbjct: 247 NVAKFLCRQSSGENCDVVVNTLGKRAPAFEGRILLNPQDKDGSFSVVITGLRKEDAGRYL 306
Query: 1401 ---SSNSEPGKQSGPVIVEEQPNKPVMDLSGVRDITVKAGEDFSIHVPFMAFPQPAAFW- 1456
S+ + + S + N+ + AG ++ P+ + +
Sbjct: 307 CGAHSDGQLQEGSPIQAWQLFVNEESTIPRSPTVVKGVAGSSVAVLCPYNRKESKSIKYW 366
Query: 1457 -------FANDSIIDDSDTRVHKQL----------TMNSASLVVKNSQRSDGGQYRLQLK 1499
++ DS+ V Q + ++++ D G Y
Sbjct: 367 CLWEGAQNGRCPLLVDSEGWVKAQYEGRLSLLEEPGNGTFTVILNQLTSRDAGFYWCLTN 426
Query: 1500 NPAGFDTATLHSRLRTLP-------------DSVNPRCHLPSSTSKERPKFPTHPNHQPW 1546
+ T + P +++ CH P S + W
Sbjct: 427 GDTLWRTTVEIKIIEGEPNLKVPGNVTAVLGETLKVPCHFPCKFS---------SYEKYW 477
Query: 1547 LKWARASLTSKGVDSTEDSISLVWSKPRHDGGS 1579
KW + S + V S
Sbjct: 478 CKWNNTGCQALPSQDEGPSKAFVNCDENSRLVS 510
>3b83_A Ten-D3; beta sheet, computational redesigned protein, alternative
splicing, cell adhesion, coiled coil, EGF-like domain,
extracellular matrix; 2.40A {Homo sapiens}
Length = 100
Score = 74.3 bits (183), Expect = 7e-16
Identities = 24/95 (25%), Positives = 39/95 (41%), Gaps = 10/95 (10%)
Query: 671 DPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSW---IRVGNTRFTTM 727
PP V +I + + W+ PI I +V S + + ++ T++
Sbjct: 3 QPPFNIKVTNITLTTAVVTWQPPI----LPIEGILVTFGRKNDPSDETTVDLTSSI-TSL 57
Query: 728 AITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITT 762
+T L P YE R+ A N S P +T+ TT
Sbjct: 58 TLTNLEPNTTYEIRIVARNGQQYSPPVSTT--FTT 90
Score = 72.4 bits (178), Expect = 3e-15
Identities = 20/88 (22%), Positives = 32/88 (36%), Gaps = 6/88 (6%)
Query: 279 PPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHW-ICISTTCHDTTFI 337
PP + V+ IT T + W PP L + +V + P + T T+
Sbjct: 4 PPFN-IKVTNITLTTAVVTWQPPI----LPIEGILVTFGRKNDPSDETTVDLTSSITSLT 58
Query: 338 VQGLTEGQEYLFHVMAVNENGMGPPLEG 365
+ L Y ++A N PP+
Sbjct: 59 LTNLEPNTTYEIRIVARNGQQYSPPVST 86
Score = 72.4 bits (178), Expect = 3e-15
Identities = 20/88 (22%), Positives = 32/88 (36%), Gaps = 6/88 (6%)
Query: 1886 PPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHW-ICISTTCHDTTFI 1944
PP + V+ IT T + W PP L + +V + P + T T+
Sbjct: 4 PPFN-IKVTNITLTTAVVTWQPPI----LPIEGILVTFGRKNDPSDETTVDLTSSITSLT 58
Query: 1945 VQGLTEGQEYLFHVMAVNENGMGPPLEG 1972
+ L Y ++A N PP+
Sbjct: 59 LTNLEPNTTYEIRIVARNGQQYSPPVST 86
Score = 70.1 bits (172), Expect = 2e-14
Identities = 22/93 (23%), Positives = 33/93 (35%), Gaps = 8/93 (8%)
Query: 898 VLDRPHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTK-VSSYVT 956
+L PP N+ + + W PP I +V N V +
Sbjct: 1 MLQ---PPFNIKVTNITLTTAVVTWQPPI----LPIEGILVTFGRKNDPSDETTVDLTSS 53
Query: 957 TPFVRVRNLAIGSTYEFRVMAENQYGLSKPALT 989
+ + NL +TYE R++A N S P T
Sbjct: 54 ITSLTLTNLEPNTTYEIRIVARNGQQYSPPVST 86
Score = 69.3 bits (170), Expect = 3e-14
Identities = 22/100 (22%), Positives = 38/100 (38%), Gaps = 9/100 (9%)
Query: 1232 SPPQGPLDVSDITPESCSLSWKPPLDDGGSPITNYVVEKYESATGFWSKLSSFVRSPA-- 1289
PP + V++IT + ++W+PP+ PI +V + + + + S
Sbjct: 3 QPPFN-IKVTNITLTTAVVTWQPPI----LPIEGILVT-FGRKNDPSDETTVDLTSSITS 56
Query: 1290 YDVFGLETNRQYRFRVRAENQYGVSEPLELDNSITAKFPF 1329
+ LE N Y R+ A N S P+ T
Sbjct: 57 LTLTNLEPNTTYEIRIVARNGQQYSPPVS-TTFTTGSLEH 95
Score = 66.3 bits (162), Expect = 4e-13
Identities = 18/89 (20%), Positives = 33/89 (37%), Gaps = 4/89 (4%)
Query: 379 SPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQIN 438
PP VT + ++W P+ I+G + + + + + +
Sbjct: 3 QPPFNIKVTNITLTTAVVTWQPPI----LPIEGILVTFGRKNDPSDETTVDLTSSITSLT 58
Query: 439 IPNLIEGRQYEFRVYAQNEAGLSLPSSAS 467
+ NL YE R+ A+N S P S +
Sbjct: 59 LTNLEPNTTYEIRIVARNGQQYSPPVSTT 87
Score = 66.3 bits (162), Expect = 4e-13
Identities = 18/89 (20%), Positives = 33/89 (37%), Gaps = 4/89 (4%)
Query: 1986 SPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQIN 2045
PP VT + ++W P+ I+G + + + + + +
Sbjct: 3 QPPFNIKVTNITLTTAVVTWQPPI----LPIEGILVTFGRKNDPSDETTVDLTSSITSLT 58
Query: 2046 IPNLIEGRQYEFRVYAQNEAGLSLPSSAS 2074
+ NL YE R+ A+N S P S +
Sbjct: 59 LTNLEPNTTYEIRIVARNGQQYSPPVSTT 87
Score = 50.1 bits (120), Expect = 2e-07
Identities = 22/120 (18%), Positives = 33/120 (27%), Gaps = 36/120 (30%)
Query: 1004 APGAPKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKY 1063
P K + T + + W P PI+ +V +D TSL
Sbjct: 4 PPFNIKVTNITLTTAVVTWQPPI----LPIEGILVTFGRKNDPSDETTVDLTSSITSL-- 57
Query: 1064 VLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPWSSSS 1123
+T+L N YE R+ A N P S++
Sbjct: 58 ------------------------------TLTNLEPNTTYEIRIVARNGQQYSPPVSTT 87
Score = 47.8 bits (114), Expect = 1e-06
Identities = 13/63 (20%), Positives = 20/63 (31%), Gaps = 3/63 (4%)
Query: 22 YIIERREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPS---ICTT 78
++ D S ++ NL YE RI+A N S P T
Sbjct: 32 ILVTFGRKNDPSDETTVDLTSSITSLTLTNLEPNTTYEIRIVARNGQQYSPPVSTTFTTG 91
Query: 79 PVK 81
++
Sbjct: 92 SLE 94
Score = 42.0 bits (99), Expect = 1e-04
Identities = 20/133 (15%), Positives = 31/133 (23%), Gaps = 52/133 (39%)
Query: 1559 VDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEG 1618
+ T + + W P PI+ +V +D TS
Sbjct: 11 TNITLTTAVVTWQPPI----LPIEGILVTFGRKNDPSDETTVDLTSSITS---------- 56
Query: 1619 KSIGSERGSTAQFLEREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKS 1678
++ NL YE RI+A N S
Sbjct: 57 -----------------------------------LTLTNLEPNTTYEIRIVARNGQQYS 81
Query: 1679 EPS---ICTTPVK 1688
P T ++
Sbjct: 82 PPVSTTFTTGSLE 94
Score = 30.4 bits (69), Expect = 1.5
Identities = 7/44 (15%), Positives = 13/44 (29%), Gaps = 4/44 (9%)
Query: 1333 DPPGQPQIVDWDTNNATLMWDRPRTDGGSKIQGYKMLLKTPTGE 1376
PP ++ + A + W P I+G +
Sbjct: 3 QPPFNIKVTNITLTTAVVTWQPPI----LPIEGILVTFGRKNDP 42
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal
transduction, acid starvation, starvation stress
response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A*
1zyd_A* 1zyc_A* 1zxe_A
Length = 303
Score = 79.7 bits (197), Expect = 9e-16
Identities = 18/89 (20%), Positives = 37/89 (41%), Gaps = 2/89 (2%)
Query: 816 SSVY-DHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQL 874
S Y ++ + +G GAFG V + R +A K I + + I E+ ++ L
Sbjct: 1 SLRYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEE-KLSTILSEVMLLASL 59
Query: 875 HHPKLINLHDAFEDDDEMVLIFEVLDRPH 903
+H ++ + A+ + V + +
Sbjct: 60 NHQYVVRYYAAWLERRNFVKPMTAVKKKS 88
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor,
CD32, immunoglobulin superfamily, low responder
polymorphism, cell membrane; HET: NAG; 1.50A {Homo
sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C*
2fcb_A
Length = 170
Score = 76.4 bits (188), Expect = 9e-16
Identities = 28/193 (14%), Positives = 58/193 (30%), Gaps = 27/193 (13%)
Query: 477 AAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKP-TISWLKGSREITPSARHHIFAEGDT 535
A + + N +Q + C P+ +I W I +
Sbjct: 1 APPKAVLKLEPPWINVLQEDSVTLTCQGARSPESDSIQWFHNGNLIPTHTQP-------- 52
Query: 536 YTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENVV 595
D+ EY C+ S L ++ P F +GE ++
Sbjct: 53 --SYRFKANNNDSGEYTCQT--GQTSLSDPVHLTVLFEWLVLQTP----HLEFQEGETIM 104
Query: 596 VK-IPFTGYPKPKITWYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAPYRVVAEND 654
++ + P K+T++++ + + S +I A++ + Y
Sbjct: 105 LRCHSWKDKPLVKVTFFQNGKSQKF--------SHLDPTFSIPQANHSHSGDYHCTGNIG 156
Query: 655 LGM-DSAIVKIQI 666
+ S V I +
Sbjct: 157 YTLFSSKPVTITV 169
Score = 71.4 bits (175), Expect = 4e-14
Identities = 28/187 (14%), Positives = 62/187 (33%), Gaps = 24/187 (12%)
Query: 90 KPDFIVPLKDLVVPLGKLLTLQCEATGTP-VPKCRWLRNGREISSGARYRVETAGGVFRL 148
K + + V +TL C+ +P +W NG I + +
Sbjct: 4 KAVLKLEPPWINVLQEDSVTLTCQGARSPESDSIQWFHNGNLIPTHTQ----------PS 53
Query: 149 HFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVK-IFY 207
+ + + D+G+YTC+ + + + + + P+ EG+ ++ +
Sbjct: 54 YRFKANNNDSGEYTCQTGQTSL--SDPVHLTVLFEWLVLQTPHL-EFQEGETIMLRCHSW 110
Query: 208 AGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSV-S 266
++V+ +NG+ + I + +GDY + S
Sbjct: 111 KDKPLVKVTFFQNGKSQKFSHLDP--------TFSIPQANHSHSGDYHCTGNIGYTLFSS 162
Query: 267 GTFTINI 273
TI +
Sbjct: 163 KPVTITV 169
Score = 71.4 bits (175), Expect = 4e-14
Identities = 28/187 (14%), Positives = 62/187 (33%), Gaps = 24/187 (12%)
Query: 1697 KPDFIVPLKDLVVPLGKLLTLQCEATGTP-VPKCRWLRNGREISSGARYRVETAGGVFRL 1755
K + + V +TL C+ +P +W NG I + +
Sbjct: 4 KAVLKLEPPWINVLQEDSVTLTCQGARSPESDSIQWFHNGNLIPTHTQ----------PS 53
Query: 1756 HFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVK-IFY 1814
+ + + D+G+YTC+ + + + + + P+ EG+ ++ +
Sbjct: 54 YRFKANNNDSGEYTCQTGQTSL--SDPVHLTVLFEWLVLQTPHL-EFQEGETIMLRCHSW 110
Query: 1815 AGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSV-S 1873
++V+ +NG+ + I + +GDY + S
Sbjct: 111 KDKPLVKVTFFQNGKSQKFSHLDP--------TFSIPQANHSHSGDYHCTGNIGYTLFSS 162
Query: 1874 GTFTINI 1880
TI +
Sbjct: 163 KPVTITV 169
Score = 51.4 bits (123), Expect = 4e-07
Identities = 17/123 (13%), Positives = 33/123 (26%), Gaps = 16/123 (13%)
Query: 2084 AAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKP-TISWLKGSREITPSARHHIFAEGDT 2142
A + + N +Q + C P+ +I W I +
Sbjct: 1 APPKAVLKLEPPWINVLQEDSVTLTCQGARSPESDSIQWFHNGNLIPTHTQP-------- 52
Query: 2143 YTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPRFRDTAYFESDVVVV 2202
D+ EY C+ S L ++ P + E + +++
Sbjct: 53 --SYRFKANNNDSGEYTCQT--GQTSLSDPVHLTVLFEWLVLQTP---HLEFQEGETIML 105
Query: 2203 VCV 2205
C
Sbjct: 106 RCH 108
Score = 40.6 bits (95), Expect = 0.002
Identities = 9/87 (10%), Positives = 23/87 (26%), Gaps = 10/87 (11%)
Query: 2088 PEIIVPLRNANAIQNHNAQFQCTIT-GCPKPTISWLKGSREITPSARHHIFAEGDTYTLI 2146
++ + + +C P +++ + + S T
Sbjct: 87 WLVLQT-PHLEFQEGETIMLRCHSWKDKPLVKVTFFQNGKSQKFS--------HLDPTFS 137
Query: 2147 INSVYGVDADEYVCRAVNKGGVKSTKA 2173
I + +Y C + S+K
Sbjct: 138 IPQANHSHSGDYHCTGNIGYTLFSSKP 164
Score = 35.9 bits (83), Expect = 0.052
Identities = 23/111 (20%), Positives = 34/111 (30%), Gaps = 13/111 (11%)
Query: 1134 APKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPI-WTVNGDEVSPDGRIKFETSENQT 1192
PK L + VL + T+T + P+ I W NG+ + + +
Sbjct: 2 PPKAVLKLEPPWINVLQEDSVTLTCQGARSPESDSIQWFHNGNLIPTHTQPSYRFKA--- 58
Query: 1193 IYRNKSAKRATDSGSYTIQLVNTVGSDSASCKV-YVVDKPSPPQGPLDVSD 1242
DSG YT Q T SD V + P +
Sbjct: 59 --------NNNDSGEYTCQTGQTSLSDPVHLTVLFEWLVLQTPHLEFQEGE 101
>2rb8_A Tenascin; beta sheet,loop design, alternative splicing, cell
adhesion, coiled coil, EGF-like domain, extracellular
matrix, glycoprotein; 1.45A {Homo sapiens} PDB: 2rbl_A
1ten_A
Length = 104
Score = 73.6 bits (181), Expect = 1e-15
Identities = 17/98 (17%), Positives = 33/98 (33%), Gaps = 10/98 (10%)
Query: 669 RPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSW---IRVGNTRFT 725
R D P V+D+ + + W P + + + + I +
Sbjct: 2 RLDAPSQIEVKDVTDTTALITWMPP----SQPVDGFELTYGIKDVPGDRTTIDLTEDE-N 56
Query: 726 TMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTK 763
+I L P +YE + + S+P+ + TT
Sbjct: 57 QYSIGNLKPDTEYEVSLISRRGDMSSNPAKET--FTTG 92
Score = 66.3 bits (162), Expect = 5e-13
Identities = 16/112 (14%), Positives = 36/112 (32%), Gaps = 15/112 (13%)
Query: 1230 KPSPPQGPLDVSDITPESCSLSWKPPLDDGGSPITNYVVEKYESATGFWSKLSSFVRSPA 1289
+ P ++V D+T + ++W PP P+ + + Y + + +
Sbjct: 2 RLDAPSQ-IEVKDVTDTTALITWMPPS----QPVDGFELT-YGIKDVPGDRTTIDLTEDE 55
Query: 1290 --YDVFGLETNRQYRFRVRAENQYGVSEPLELDNSITAKFPFTVPDPPGQPQ 1339
Y + L+ + +Y + + S P T T +
Sbjct: 56 NQYSIGNLKPDTEYEVSLISRRGDMSSNPA----KETFT---TGLAAALEHH 100
Score = 64.3 bits (157), Expect = 3e-12
Identities = 15/106 (14%), Positives = 32/106 (30%), Gaps = 10/106 (9%)
Query: 277 PGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWI-CISTTCHDTT 335
P ++V ++T T + W PP V + + +P I T +
Sbjct: 3 LDAPSQ-IEVKDVTDTTALITWMPPS----QPVDGFELTYGIKDVPGDRTTIDLTEDENQ 57
Query: 336 FIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPP 381
+ + L EY +++ + P + +
Sbjct: 58 YSIGNLKPDTEYEVSLISRRGDMSSNPAKET----FTTGLAAALEH 99
Score = 64.3 bits (157), Expect = 3e-12
Identities = 15/106 (14%), Positives = 32/106 (30%), Gaps = 10/106 (9%)
Query: 1884 PGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWI-CISTTCHDTT 1942
P ++V ++T T + W PP V + + +P I T +
Sbjct: 3 LDAPSQ-IEVKDVTDTTALITWMPPS----QPVDGFELTYGIKDVPGDRTTIDLTEDENQ 57
Query: 1943 FIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPP 1988
+ + L EY +++ + P + +
Sbjct: 58 YSIGNLKPDTEYEVSLISRRGDMSSNPAKET----FTTGLAAALEH 99
Score = 62.4 bits (152), Expect = 1e-11
Identities = 12/92 (13%), Positives = 27/92 (29%), Gaps = 9/92 (9%)
Query: 901 RPHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTK---VSSYVTT 957
R P + + + + W PP + + + + ++
Sbjct: 2 RLDAPSQIEVKDVTDTTALITWMPPS----QPVDGFELTYGIKDVPGDRTTIDLTEDENQ 57
Query: 958 PFVRVRNLAIGSTYEFRVMAENQYGLSKPALT 989
+ NL + YE +++ S PA
Sbjct: 58 --YSIGNLKPDTEYEVSLISRRGDMSSNPAKE 87
Score = 58.2 bits (141), Expect = 3e-10
Identities = 14/91 (15%), Positives = 29/91 (31%), Gaps = 4/91 (4%)
Query: 377 KPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQ 436
+ P V V ++W P + G+ + + +Q
Sbjct: 2 RLDAPSQIEVKDVTDTTALITWMPPS----QPVDGFELTYGIKDVPGDRTTIDLTEDENQ 57
Query: 437 INIPNLIEGRQYEFRVYAQNEAGLSLPSSAS 467
+I NL +YE + ++ S P+ +
Sbjct: 58 YSIGNLKPDTEYEVSLISRRGDMSSNPAKET 88
Score = 58.2 bits (141), Expect = 3e-10
Identities = 14/91 (15%), Positives = 29/91 (31%), Gaps = 4/91 (4%)
Query: 1984 KPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQ 2043
+ P V V ++W P + G+ + + +Q
Sbjct: 2 RLDAPSQIEVKDVTDTTALITWMPPS----QPVDGFELTYGIKDVPGDRTTIDLTEDENQ 57
Query: 2044 INIPNLIEGRQYEFRVYAQNEAGLSLPSSAS 2074
+I NL +YE + ++ S P+ +
Sbjct: 58 YSIGNLKPDTEYEVSLISRRGDMSSNPAKET 88
Score = 43.2 bits (102), Expect = 7e-05
Identities = 11/122 (9%), Positives = 27/122 (22%), Gaps = 36/122 (29%)
Query: 1002 PGAPGAPKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSL 1061
AP + D T+ + + W P P+ + + + +
Sbjct: 3 LDAPSQIEVKDVTDTTALITWMPPS----QPVDGFELTYGIKDVPGDRTTIDLTEDENQY 58
Query: 1062 KYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPWSS 1121
+ +L + EYE + + +
Sbjct: 59 S--------------------------------IGNLKPDTEYEVSLISRRGDMSSNPAK 86
Query: 1122 SS 1123
+
Sbjct: 87 ET 88
Score = 39.7 bits (93), Expect = 0.001
Identities = 11/56 (19%), Positives = 19/56 (33%)
Query: 22 YIIERREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPSICT 77
+ + D E +S+ NL +YE +I+ S P+ T
Sbjct: 33 FELTYGIKDVPGDRTTIDLTEDENQYSIGNLKPDTEYEVSLISRRGDMSSNPAKET 88
Score = 37.4 bits (87), Expect = 0.007
Identities = 15/126 (11%), Positives = 30/126 (23%), Gaps = 49/126 (38%)
Query: 1559 VDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEG 1618
D T+ + + W P P+ + + +
Sbjct: 12 KDVTDTTALITWMPPS----QPVDGFELTYGIKDVPGDRT-------------------- 47
Query: 1619 KSIGSERGSTAQFLEREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKS 1678
++ E +S+ NL +YE +I+ S
Sbjct: 48 --------------TIDLTED-----------ENQYSIGNLKPDTEYEVSLISRRGDMSS 82
Query: 1679 EPSICT 1684
P+ T
Sbjct: 83 NPAKET 88
Score = 30.4 bits (69), Expect = 2.0
Identities = 9/49 (18%), Positives = 16/49 (32%), Gaps = 4/49 (8%)
Query: 1332 PDPPGQPQIVDWDTNNATLMWDRPRTDGGSKIQGYKMLLKTPTGELPTT 1380
D P Q ++ D A + W P + G+++ T
Sbjct: 3 LDAPSQIEVKDVTDTTALITWMPPS----QPVDGFELTYGIKDVPGDRT 47
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit;
immunoglobulin fold, glycoprotein, IGE-binding Pro
immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP:
b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A*
1j88_A* 1j89_A* 1j87_A*
Length = 176
Score = 76.1 bits (187), Expect = 1e-15
Identities = 32/193 (16%), Positives = 56/193 (29%), Gaps = 26/193 (13%)
Query: 89 EKPDFIVPLKDLVVPLGKLLTLQCEATGTP-VPKCRWLRNGREISSGARYRVETAGGVFR 147
+KP + + G+ +TL C V +W NG
Sbjct: 3 QKPKVSLNPPWNRIFKGENVTLTCNGNNFFEVSSTKWFHNGSLSEETNS----------S 52
Query: 148 LHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPR-IDRMPNALYIPEGDNTKVK-I 205
L+ D+G+Y C+ S V + + +A + EG ++
Sbjct: 53 LNIVNAKFEDSGEYKCQHQQVNE----SEPVYLEVFSDWLLLQASAEVVMEGQPLFLRCH 108
Query: 206 FYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSV 265
+ +V K+G ++ + I I ED+G Y
Sbjct: 109 GWRNWDVYKVIYYKDGEALKYW--------YENHNISITNATVEDSGTYYCTGKVWQLDY 160
Query: 266 -SGTFTINITGLP 277
S I + P
Sbjct: 161 ESEPLNITVIKAP 173
Score = 76.1 bits (187), Expect = 1e-15
Identities = 32/193 (16%), Positives = 56/193 (29%), Gaps = 26/193 (13%)
Query: 1696 EKPDFIVPLKDLVVPLGKLLTLQCEATGTP-VPKCRWLRNGREISSGARYRVETAGGVFR 1754
+KP + + G+ +TL C V +W NG
Sbjct: 3 QKPKVSLNPPWNRIFKGENVTLTCNGNNFFEVSSTKWFHNGSLSEETNS----------S 52
Query: 1755 LHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPR-IDRMPNALYIPEGDNTKVK-I 1812
L+ D+G+Y C+ S V + + +A + EG ++
Sbjct: 53 LNIVNAKFEDSGEYKCQHQQVNE----SEPVYLEVFSDWLLLQASAEVVMEGQPLFLRCH 108
Query: 1813 FYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSV 1872
+ +V K+G ++ + I I ED+G Y
Sbjct: 109 GWRNWDVYKVIYYKDGEALKYW--------YENHNISITNATVEDSGTYYCTGKVWQLDY 160
Query: 1873 -SGTFTINITGLP 1884
S I + P
Sbjct: 161 ESEPLNITVIKAP 173
Score = 73.8 bits (181), Expect = 7e-15
Identities = 24/196 (12%), Positives = 61/196 (31%), Gaps = 27/196 (13%)
Query: 478 AKAPEIIVPLRNANAIQNHNAQFQCTITGCPKP-TISWLKGSREITPSARHHIFAEGDTY 536
+ P++ + + N C + + W +
Sbjct: 2 PQKPKVSLNPPWNRIFKGENVTLTCNGNNFFEVSSTKWFHNGSLSEETNS---------- 51
Query: 537 TLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENVVV 596
+L I + D+ EY C+ +S L + + +G+ + +
Sbjct: 52 SLNIVNAKFEDSGEYKCQHQQ--VNESEPVYLEVFSDWLLLQASA----EVVMEGQPLFL 105
Query: 597 K-IPFTGYPKPKITWYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAPYRVVAENDL 655
+ + + K+ +Y+D E ++ + ++I +A+ D+ Y +
Sbjct: 106 RCHGWRNWDVYKVIYYKDGEALKY--------WYENHNISITNATVEDSGTYYCTGKVWQ 157
Query: 656 G-MDSAIVKIQISDRP 670
+S + I + P
Sbjct: 158 LDYESEPLNITVIKAP 173
Score = 55.3 bits (133), Expect = 2e-08
Identities = 18/97 (18%), Positives = 30/97 (30%), Gaps = 12/97 (12%)
Query: 93 FIVPLKDLVVPLGKLLTLQCEA-TGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFN 151
++ VV G+ L L+C V K + ++G + +
Sbjct: 88 LLLQASAEVVMEGQPLFLRCHGWRNWDVYKVIYYKDGEALKYWYENH--------NISIT 139
Query: 152 EVTDVDNGDYTCEAYNSVGFAHTSSRVKI--GTPPRI 186
T D+G Y C + S + I PR
Sbjct: 140 NATVEDSGTYYCTGKVWQL-DYESEPLNITVIKAPRE 175
Score = 55.3 bits (133), Expect = 2e-08
Identities = 18/97 (18%), Positives = 30/97 (30%), Gaps = 12/97 (12%)
Query: 1700 FIVPLKDLVVPLGKLLTLQCEA-TGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFN 1758
++ VV G+ L L+C V K + ++G + +
Sbjct: 88 LLLQASAEVVMEGQPLFLRCHGWRNWDVYKVIYYKDGEALKYWYENH--------NISIT 139
Query: 1759 EVTDVDNGDYTCEAYNSVGFAHTSSRVKI--GTPPRI 1793
T D+G Y C + S + I PR
Sbjct: 140 NATVEDSGTYYCTGKVWQL-DYESEPLNITVIKAPRE 175
Score = 46.4 bits (110), Expect = 2e-05
Identities = 14/122 (11%), Positives = 31/122 (25%), Gaps = 16/122 (13%)
Query: 2085 AKAPEIIVPLRNANAIQNHNAQFQCTITGCPKP-TISWLKGSREITPSARHHIFAEGDTY 2143
+ P++ + + N C + + W +
Sbjct: 2 PQKPKVSLNPPWNRIFKGENVTLTCNGNNFFEVSSTKWFHNGSLSEETNS---------- 51
Query: 2144 TLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPRFRDTAYFESDVVVVV 2203
+L I + D+ EY C+ +S L + + E + +
Sbjct: 52 SLNIVNAKFEDSGEYKCQHQQ--VNESEPVYLEVFSDWLLLQAS---AEVVMEGQPLFLR 106
Query: 2204 CV 2205
C
Sbjct: 107 CH 108
Score = 46.4 bits (110), Expect = 2e-05
Identities = 12/114 (10%), Positives = 33/114 (28%), Gaps = 14/114 (12%)
Query: 464 SSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQC-TITGCPKPTISWLKGSREIT 522
+ S V + + +++ ++ +C + + K +
Sbjct: 73 VNESEPVYL----EVFSDWLLLQASAEVVMEGQPLFLRCHGWRNWDVYKVIYYKDGEALK 128
Query: 523 PSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNK-GGVKSTKAELIIMTAPK 575
+H + I + D+ Y C +S + ++ AP+
Sbjct: 129 YWYENH--------NISITNATVEDSGTYYCTGKVWQLDYESEPLNITVIKAPR 174
Score = 46.4 bits (110), Expect = 2e-05
Identities = 12/114 (10%), Positives = 33/114 (28%), Gaps = 14/114 (12%)
Query: 2071 SSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQC-TITGCPKPTISWLKGSREIT 2129
+ S V + + +++ ++ +C + + K +
Sbjct: 73 VNESEPVYL----EVFSDWLLLQASAEVVMEGQPLFLRCHGWRNWDVYKVIYYKDGEALK 128
Query: 2130 PSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNK-GGVKSTKAELIIMTAPK 2182
+H + I + D+ Y C +S + ++ AP+
Sbjct: 129 YWYENH--------NISITNATVEDSGTYYCTGKVWQLDYESEPLNITVIKAPR 174
Score = 32.2 bits (73), Expect = 1.3
Identities = 19/124 (15%), Positives = 42/124 (33%), Gaps = 22/124 (17%)
Query: 1419 PNKPVMDLSGVRDITVKAGEDFSIHVPFMAFPQPAAFWFANDSIIDDSDTRVHKQLTMNS 1478
P KP + L+ + GE+ ++ F + ++ + ++ +
Sbjct: 2 PQKPKVSLNP-PWNRIFKGENVTLTCNGNNFFEVSSTKWFHN----------GSLSEETN 50
Query: 1479 ASLVVKNSQRSDGGQYRLQLKNPAGFDTATLHSRLRTLP-----------DSVNPRCHLP 1527
+SL + N++ D G+Y+ Q + + L L + RCH
Sbjct: 51 SSLNIVNAKFEDSGEYKCQHQQVNESEPVYLEVFSDWLLLQASAEVVMEGQPLFLRCHGW 110
Query: 1528 SSTS 1531
+
Sbjct: 111 RNWD 114
Score = 31.0 bits (70), Expect = 2.5
Identities = 21/97 (21%), Positives = 35/97 (36%), Gaps = 14/97 (14%)
Query: 1132 PCAPKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPI-WTVNGDEVSPDGRIKFETSEN 1190
P PK++ L+ + GE T+T + + + W NG ET+ +
Sbjct: 2 PQKPKVS--LNPPWNRIFKGENVTLTCNGNNFFEVSSTKWFHNGSLSE-------ETNSS 52
Query: 1191 QTIYRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYV 1227
I + DSG Y Q S+ +V+
Sbjct: 53 LNI----VNAKFEDSGEYKCQHQQVNESEPVYLEVFS 85
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding,
lipoprotein, myristate, PA phosphorylation; HET: STU;
2.6A {Homo sapiens}
Length = 317
Score = 79.3 bits (196), Expect = 1e-15
Identities = 19/85 (22%), Positives = 35/85 (41%), Gaps = 4/85 (4%)
Query: 821 HYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQLHHPKLI 880
HY ++++G G F V G+ +A K I ++E ++E D+ +HP ++
Sbjct: 30 HYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNIL 89
Query: 881 NLHDAFEDDD----EMVLIFEVLDR 901
L + E L+ R
Sbjct: 90 RLVAYCLRERGAKHEAWLLLPFFKR 114
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET:
DKI; 1.53A {Homo sapiens}
Length = 331
Score = 79.2 bits (196), Expect = 2e-15
Identities = 27/86 (31%), Positives = 47/86 (54%), Gaps = 6/86 (6%)
Query: 820 DHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRK----EIDIMNQLH 875
+ Y+ L +G G++G+V +CR + TG I A K S + ++++K EI ++ QL
Sbjct: 25 EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESD--DDKMVKKIAMREIKLLKQLR 82
Query: 876 HPKLINLHDAFEDDDEMVLIFEVLDR 901
H L+NL + + L+FE +D
Sbjct: 83 HENLVNLLEVCKKKKRWYLVFEFVDH 108
>2erj_C Cytokine receptor common gamma chain; immune system-cytok complex;
HET: NAG FUC BMA; 3.00A {Homo sapiens} SCOP: b.1.2.1
b.1.2.1
Length = 247
Score = 77.5 bits (190), Expect = 2e-15
Identities = 23/232 (9%), Positives = 64/232 (27%), Gaps = 14/232 (6%)
Query: 257 NLSNSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVER 316
N ++ T + + P+ + W +T + +
Sbjct: 16 NEDTTADFFLTTMPTDSLSVSTLPLPEVQCFVFNVEYMNCTWQSSSEPQPTNLTLHYWYK 75
Query: 317 RDISMPHWIC---ISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKS 373
+ C + + + +Q F V + + +
Sbjct: 76 NSDNDKVQKCSHYLFSEEITSGCQLQKKEIHLYQTFVVQLQDPREPRRQATQMLKL---Q 132
Query: 374 PYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICA 433
P P + ++ + L+W+ + + + +W +V
Sbjct: 133 NLVIPWAPENLTLHKLSESQLELNWNNRFL---NHCLEHLVQYRTDWDHSWTEQSVDY-- 187
Query: 434 PSQINIPNLIEGRQYEFRVYAQNEAGLS---LPSSASNSVQIKDPMAAKAPE 482
+ ++P++ ++Y FRV ++ S S+ + + + P
Sbjct: 188 RHKFSLPSVDGQKRYTFRVRSRFNPLCGSAQHWSEWSHPIHWGSNTSKENPR 239
Score = 77.5 bits (190), Expect = 2e-15
Identities = 23/232 (9%), Positives = 64/232 (27%), Gaps = 14/232 (6%)
Query: 1864 NLSNSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVER 1923
N ++ T + + P+ + W +T + +
Sbjct: 16 NEDTTADFFLTTMPTDSLSVSTLPLPEVQCFVFNVEYMNCTWQSSSEPQPTNLTLHYWYK 75
Query: 1924 RDISMPHWIC---ISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKS 1980
+ C + + + +Q F V + + +
Sbjct: 76 NSDNDKVQKCSHYLFSEEITSGCQLQKKEIHLYQTFVVQLQDPREPRRQATQMLKL---Q 132
Query: 1981 PYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICA 2040
P P + ++ + L+W+ + + + +W +V
Sbjct: 133 NLVIPWAPENLTLHKLSESQLELNWNNRFL---NHCLEHLVQYRTDWDHSWTEQSVDY-- 187
Query: 2041 PSQINIPNLIEGRQYEFRVYAQNEAGLS---LPSSASNSVQIKDPMAAKAPE 2089
+ ++P++ ++Y FRV ++ S S+ + + + P
Sbjct: 188 RHKFSLPSVDGQKRYTFRVRSRFNPLCGSAQHWSEWSHPIHWGSNTSKENPR 239
Score = 61.4 bits (148), Expect = 5e-10
Identities = 18/127 (14%), Positives = 41/127 (32%), Gaps = 6/127 (4%)
Query: 635 TIRDASNVDTAPYRVVAENDLGM---DSAIVKIQISDRPDPPQFPTVEDIGHDSLALVWR 691
++ + V ++ + ++K+Q P P+ T+ + L L W
Sbjct: 99 QLQKKEIHLYQTFVVQLQDPREPRRQATQMLKLQNLVIPWAPENLTLHKLSESQLELNWN 158
Query: 692 APIWDGGSNITNYIVEKREHPMSSWIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRS 751
++ ++V+ R SW ++ + +Y FRV +
Sbjct: 159 NRFL---NHCLEHLVQYRTDWDHSWTEQSVDYRHKFSLPSVDGQKRYTFRVRSRFNPLCG 215
Query: 752 DPSTTSD 758
S+
Sbjct: 216 SAQHWSE 222
Score = 56.4 bits (135), Expect = 2e-08
Identities = 33/230 (14%), Positives = 60/230 (26%), Gaps = 48/230 (20%)
Query: 902 PHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTKVSSYVTTPFVR 961
P + F + + W + + +T + K N K S Y+ + +
Sbjct: 37 TLPLPEVQCFVFNVEYMNCTWQSSSEPQPTNLTLHYWYKNSDNDK-VQKCSHYLFSEEIT 95
Query: 962 VR----NLAIGSTYEFRVMAENQYGLSKPALTIDPIKAKHPFDVPGAPGAPKGVDSTEDS 1017
I F V ++ + A + +P AP +E
Sbjct: 96 SGCQLQKKEIHLYQTFVVQLQDPREPRRQA---TQMLKLQNLVIPWAPENLTLHKLSESQ 152
Query: 1018 ISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEGKSIGSER 1077
+ L W+ + ++V+ R D W + S+ +
Sbjct: 153 LELNWNNRFL---NHCLEHLVQYRTDWDHSWTEQSVDY--RHKFS--------------- 192
Query: 1078 GSTAQFLELLLMFIPNRVTSLIENHEYEFRV-CAVNA--AGQGPWSSSSD 1124
+ S+ Y FRV N WS S
Sbjct: 193 -----------------LPSVDGQKRYTFRVRSRFNPLCGSAQHWSEWSH 225
Score = 54.8 bits (131), Expect = 6e-08
Identities = 15/103 (14%), Positives = 40/103 (38%), Gaps = 8/103 (7%)
Query: 1208 YTIQLVNTVGSDSASCKVYVVD---KPSPPQGPLDVSDITPESCSLSWKPPLDDGGSPIT 1264
+ +QL + + ++ + P P+ L + ++ L+W +
Sbjct: 111 FVVQLQDPREPRRQATQMLKLQNLVIPWAPEN-LTLHKLSESQLELNWNNRFL---NHCL 166
Query: 1265 NYVVEKYESATGFWSKLSSFVRSPAYDVFGLETNRQYRFRVRA 1307
++V+ W++ S + + ++ ++Y FRVR+
Sbjct: 167 EHLVQYRTDWDHSWTEQSV-DYRHKFSLPSVDGQKRYTFRVRS 208
Score = 50.6 bits (120), Expect = 2e-06
Identities = 21/105 (20%), Positives = 40/105 (38%), Gaps = 6/105 (5%)
Query: 873 QLHHPKLINLHDAFEDDDEMVLIFEVLD--RPHPPENLHADEFAGDSLTLYWTPPRDNGG 930
L+ ++ L D E + + ++ + P PENL + + L L W
Sbjct: 106 HLYQTFVVQLQDPREPRRQATQMLKLQNLVIPWAPENLTLHKLSESQLELNWNNRFL--- 162
Query: 931 SEITNYVVEKKDYNSTVWTKVSSYVTTPFVRVRNLAIGSTYEFRV 975
+ ++V+ + WT+ S F + ++ Y FRV
Sbjct: 163 NHCLEHLVQYRTDWDHSWTEQSVDYRHKFS-LPSVDGQKRYTFRV 206
Score = 39.0 bits (90), Expect = 0.011
Identities = 19/187 (10%), Positives = 47/187 (25%), Gaps = 17/187 (9%)
Query: 1214 NTVGSDSASCKVYVVDKPSPPQGPLDVSDITP--ESCSLSWKPPLDDGGSPITNYVVEKY 1271
+D + +V E + +W+ + + +T + K
Sbjct: 17 EDTTADFFLTTMPTDSLSVSTLPLPEVQCFVFNVEYMNCTWQSSSEPQPTNLTLHYWYKN 76
Query: 1272 ESATGFWSKLSSFVRSPAYDVF----GLETNRQYRFRVRAENQYGVSEPLELDNSITAKF 1327
K S ++ S E + F V+ ++ P +
Sbjct: 77 SD-NDKVQKCSHYLFSEEITSGCQLQKKEIHLYQTFVVQLQDPRE---PRRQATQMLKLQ 132
Query: 1328 PFTVPDPPGQPQIVDWDTNNATLMWDRPRTDGGSKIQGYKMLLKTPTGELPTTIWSKIRP 1387
+P P + + L W+ + + + +T W++
Sbjct: 133 NLVIPWAPENLTLHKLSESQLELNWNNRFL---NHCLEHLVQYRTDWD----HSWTEQSV 185
Query: 1388 TSSTVYC 1394
+
Sbjct: 186 DYRHKFS 192
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta
sandwich, immunoglobulin-like, immune system receptor;
1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A
1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Length = 175
Score = 75.7 bits (186), Expect = 2e-15
Identities = 35/188 (18%), Positives = 64/188 (34%), Gaps = 24/188 (12%)
Query: 90 KPDFIVPLKDLVVPLGKLLTLQCEATGTPVP-KCRWLRNGREISSGARYRVETAGGVFRL 148
K + + V +TL+C+ +P +W N ISS A
Sbjct: 7 KAVVFLEPQWYSVLEKDSVTLKCQGAYSPEDNSTQWFHNESLISSQAS----------SY 56
Query: 149 HFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVK-IFY 207
+ T D+G+Y C+ S ++++ + + P E D ++ +
Sbjct: 57 FIDAATVNDSGEYRCQTNLSTLSDPV--QLEVHIGWLLLQAPRW-VFKEEDPIHLRCHSW 113
Query: 208 AGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSV-S 266
+V+ +NG+ + I + +D+G Y S +V S
Sbjct: 114 KNTALHKVTYLQNGKDRKYFHHNS--------DFHIPKATLKDSGSYFCRGLVGSKNVSS 165
Query: 267 GTFTINIT 274
T I IT
Sbjct: 166 ETVNITIT 173
Score = 75.7 bits (186), Expect = 2e-15
Identities = 35/188 (18%), Positives = 64/188 (34%), Gaps = 24/188 (12%)
Query: 1697 KPDFIVPLKDLVVPLGKLLTLQCEATGTPVP-KCRWLRNGREISSGARYRVETAGGVFRL 1755
K + + V +TL+C+ +P +W N ISS A
Sbjct: 7 KAVVFLEPQWYSVLEKDSVTLKCQGAYSPEDNSTQWFHNESLISSQAS----------SY 56
Query: 1756 HFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVK-IFY 1814
+ T D+G+Y C+ S ++++ + + P E D ++ +
Sbjct: 57 FIDAATVNDSGEYRCQTNLSTLSDPV--QLEVHIGWLLLQAPRW-VFKEEDPIHLRCHSW 113
Query: 1815 AGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSV-S 1873
+V+ +NG+ + I + +D+G Y S +V S
Sbjct: 114 KNTALHKVTYLQNGKDRKYFHHNS--------DFHIPKATLKDSGSYFCRGLVGSKNVSS 165
Query: 1874 GTFTINIT 1881
T I IT
Sbjct: 166 ETVNITIT 173
Score = 71.4 bits (175), Expect = 5e-14
Identities = 26/190 (13%), Positives = 62/190 (32%), Gaps = 27/190 (14%)
Query: 481 PEIIVPLRNANAIQNHNAQFQCTITGCPKP-TISWLKGSREITPSARHHIFAEGDTYTLI 539
+ + + + ++ + +C P+ + W I+ A +
Sbjct: 8 AVVFLEPQWYSVLEKDSVTLKCQGAYSPEDNSTQWFHNESLISSQAS----------SYF 57
Query: 540 INSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVK-I 598
I++ D+ EY C+ S +L + PR F + + + ++
Sbjct: 58 IDAATVNDSGEYRCQT--NLSTLSDPVQLEVHIGWLLLQAPR----WVFKEEDPIHLRCH 111
Query: 599 PFTGYPKPKITWYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAPYRVVAENDLG-M 657
+ K+T+ ++ + + H ++ I A+ D+ Y +
Sbjct: 112 SWKNTALHKVTYLQNGKDRKYFHH--------NSDFHIPKATLKDSGSYFCRGLVGSKNV 163
Query: 658 DSAIVKIQIS 667
S V I I+
Sbjct: 164 SSETVNITIT 173
Score = 47.2 bits (112), Expect = 1e-05
Identities = 16/118 (13%), Positives = 37/118 (31%), Gaps = 16/118 (13%)
Query: 2088 PEIIVPLRNANAIQNHNAQFQCTITGCPKP-TISWLKGSREITPSARHHIFAEGDTYTLI 2146
+ + + + ++ + +C P+ + W I+ A +
Sbjct: 8 AVVFLEPQWYSVLEKDSVTLKCQGAYSPEDNSTQWFHNESLISSQAS----------SYF 57
Query: 2147 INSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPRFRDTAYFESDVVVVVC 2204
I++ D+ EY C+ S +L + P + E D + + C
Sbjct: 58 IDAATVNDSGEYRCQT--NLSTLSDPVQLEVHIGWLLLQAP---RWVFKEEDPIHLRC 110
Score = 36.8 bits (85), Expect = 0.031
Identities = 14/109 (12%), Positives = 34/109 (31%), Gaps = 14/109 (12%)
Query: 2071 SSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQC-TITGCPKPTISWLKGSREIT 2129
S+ S+ VQ++ +++ + +C + +++L+ ++
Sbjct: 76 STLSDPVQLEV----HIGWLLLQAPRWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKDRK 131
Query: 2130 PSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNK-GGVKSTKAELII 2177
+ I D+ Y CR + V S + I
Sbjct: 132 YFHHNS--------DFHIPKATLKDSGSYFCRGLVGSKNVSSETVNITI 172
Score = 33.3 bits (76), Expect = 0.47
Identities = 23/108 (21%), Positives = 35/108 (32%), Gaps = 14/108 (12%)
Query: 1134 APKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPI-WTVNGDEVSPDGRIKFETSENQT 1192
PK L + +VL + T+ + P+ W N +S
Sbjct: 5 LPKAVVFLEPQWYSVLEKDSVTLKCQGAYSPEDNSTQWFHNESLISSQASS--------- 55
Query: 1193 IYRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYVVDKPSPPQGPLDV 1240
Y +A DSG Y Q + SD +V++ Q P V
Sbjct: 56 -YFIDAATV-NDSGEYRCQTNLSTLSDPVQLEVHI--GWLLLQAPRWV 99
Score = 32.9 bits (75), Expect = 0.58
Identities = 21/169 (12%), Positives = 47/169 (27%), Gaps = 23/169 (13%)
Query: 590 KGENVVVKIPFTGYPKP-KITWYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAPYR 648
+ ++V +K P+ W+ + +I S + + I A+ D+ YR
Sbjct: 21 EKDSVTLKCQGAYSPEDNSTQWFHNESLI----------SSQASSYFIDAATVNDSGEYR 70
Query: 649 VVAENDLGMDSAIVKIQISDRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEK 708
S V++++ Q P D + L + + + +
Sbjct: 71 CQTNL--STLSDPVQLEVHIGWLLLQAPRWVFKEEDPIHLRCHS---WKNTALHKVTYLQ 125
Query: 709 REHPMSSWIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYG--RSDPST 755
+ N+ F I + + S+
Sbjct: 126 NGKDRKYF--HHNSDFH---IPKATLKDSGSYFCRGLVGSKNVSSETVN 169
Score = 30.6 bits (69), Expect = 3.5
Identities = 25/135 (18%), Positives = 49/135 (36%), Gaps = 25/135 (18%)
Query: 1415 VEEQPNKPVMDLSGVRDITVKAGEDFSIHVPFMAFPQPAAF-WFANDSIIDDSDTRVHKQ 1473
E+ P K V+ L + +V + ++ P+ + WF N+
Sbjct: 2 TEDLP-KAVVFLEP-QWYSVLEKDSVTLKCQGAYSPEDNSTQWFHNE-----------SL 48
Query: 1474 LTMNSASLVVKNSQRSDGGQYRLQLKNPAGFDTATLH----SRLRTLP-------DSVNP 1522
++ ++S + + +D G+YR Q D L L P D ++
Sbjct: 49 ISSQASSYFIDAATVNDSGEYRCQTNLSTLSDPVQLEVHIGWLLLQAPRWVFKEEDPIHL 108
Query: 1523 RCHLPSSTSKERPKF 1537
RCH +T+ + +
Sbjct: 109 RCHSWKNTALHKVTY 123
>2dav_A SLOW MYBP-C, myosin-binding protein C, SLOW-type; IG domain,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
b.1.1.4
Length = 126
Score = 73.9 bits (181), Expect = 2e-15
Identities = 23/120 (19%), Positives = 41/120 (34%), Gaps = 16/120 (13%)
Query: 87 GGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPV---PKCRWLRN---------GREISSG 134
G FI + V +G+ +T + + P +W + G+ +
Sbjct: 4 GSSGILFIEKPQGGTVKVGEDITFIAKVKAEDLLRKPTIKWFKGKWMDLASKAGKHLQLK 63
Query: 135 ARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKI----GTPPRIDRMP 190
+ + F + + D G+Y CE F S +++ GT P ID P
Sbjct: 64 ETFERHSRVYTFEMQIIKAKDNFAGNYRCEVTYKDKFDSCSFDLEVHESTGTTPNIDSGP 123
Score = 73.9 bits (181), Expect = 2e-15
Identities = 23/120 (19%), Positives = 41/120 (34%), Gaps = 16/120 (13%)
Query: 1694 GGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPV---PKCRWLRN---------GREISSG 1741
G FI + V +G+ +T + + P +W + G+ +
Sbjct: 4 GSSGILFIEKPQGGTVKVGEDITFIAKVKAEDLLRKPTIKWFKGKWMDLASKAGKHLQLK 63
Query: 1742 ARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKI----GTPPRIDRMP 1797
+ + F + + D G+Y CE F S +++ GT P ID P
Sbjct: 64 ETFERHSRVYTFEMQIIKAKDNFAGNYRCEVTYKDKFDSCSFDLEVHESTGTTPNIDSGP 123
Score = 69.6 bits (170), Expect = 7e-14
Identities = 19/111 (17%), Positives = 32/111 (28%), Gaps = 12/111 (10%)
Query: 477 AAKAPEIIVPLRNANAIQNHNAQFQCTITGCP---KPTISWLKGS-REITPSARHHI--- 529
+ I + + F + KPTI W KG ++ A H+
Sbjct: 4 GSSGILFIEKPQGGTVKVGEDITFIAKVKAEDLLRKPTIKWFKGKWMDLASKAGKHLQLK 63
Query: 530 -----FAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPK 575
+ T+ + I A Y C K S +L + +
Sbjct: 64 ETFERHSRVYTFEMQIIKAKDNFAGNYRCEVTYKDKFDSCSFDLEVHESTG 114
Score = 69.6 bits (170), Expect = 7e-14
Identities = 19/111 (17%), Positives = 32/111 (28%), Gaps = 12/111 (10%)
Query: 2084 AAKAPEIIVPLRNANAIQNHNAQFQCTITGCP---KPTISWLKGS-REITPSARHHI--- 2136
+ I + + F + KPTI W KG ++ A H+
Sbjct: 4 GSSGILFIEKPQGGTVKVGEDITFIAKVKAEDLLRKPTIKWFKGKWMDLASKAGKHLQLK 63
Query: 2137 -----FAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPK 2182
+ T+ + I A Y C K S +L + +
Sbjct: 64 ETFERHSRVYTFEMQIIKAKDNFAGNYRCEVTYKDKFDSCSFDLEVHESTG 114
Score = 52.3 bits (125), Expect = 7e-08
Identities = 16/115 (13%), Positives = 34/115 (29%), Gaps = 15/115 (13%)
Query: 572 TAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYP---KPKITWYRDNEV---IESGGHFHV 625
+ F P+ GE++ KP I W++ + ++G H +
Sbjct: 6 SGILFIEKPQ---GGTVKVGEDITFIAKVKAEDLLRKPTIKWFKGKWMDLASKAGKHLQL 62
Query: 626 E------TSERHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQISDRPDPPQ 674
+ + + I A + YR DS +++ +
Sbjct: 63 KETFERHSRVYTFEMQIIKAKDNFAGNYRCEVTYKDKFDSCSFDLEVHESTGTTP 117
Score = 47.7 bits (113), Expect = 2e-06
Identities = 15/103 (14%), Positives = 29/103 (28%), Gaps = 11/103 (10%)
Query: 1144 RDMTVLAGEEFTITVPFSGRP---KPTPIWTVNG---DEVSPDGRIKFETSENQTIYRNK 1197
+ TV GE+ T KPT W ++ + + +
Sbjct: 15 QGGTVKVGEDITFIAKVKAEDLLRKPTIKWFKGKWMDLASKAGKHLQLKETFERHSRVYT 74
Query: 1198 -----SAKRATDSGSYTIQLVNTVGSDSASCKVYVVDKPSPPQ 1235
+ +G+Y ++ DS S + V +
Sbjct: 75 FEMQIIKAKDNFAGNYRCEVTYKDKFDSCSFDLEVHESTGTTP 117
Score = 44.2 bits (104), Expect = 4e-05
Identities = 19/92 (20%), Positives = 33/92 (35%), Gaps = 11/92 (11%)
Query: 1430 RDITVKAGEDFSIHVPFMAFP---QPAAFWFANDSIIDDSDTRVHKQLTMN--------S 1478
+ TVK GED + A +P WF + S H QL +
Sbjct: 15 QGGTVKVGEDITFIAKVKAEDLLRKPTIKWFKGKWMDLASKAGKHLQLKETFERHSRVYT 74
Query: 1479 ASLVVKNSQRSDGGQYRLQLKNPAGFDTATLH 1510
+ + ++ + G YR ++ FD+ +
Sbjct: 75 FEMQIIKAKDNFAGNYRCEVTYKDKFDSCSFD 106
Score = 41.1 bits (96), Expect = 6e-04
Identities = 11/63 (17%), Positives = 25/63 (39%)
Query: 218 TKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLP 277
+K G+ +Q + F+ + I + + AG+Y ++ S +F + +
Sbjct: 54 SKAGKHLQLKETFERHSRVYTFEMQIIKAKDNFAGNYRCEVTYKDKFDSCSFDLEVHEST 113
Query: 278 GPP 280
G
Sbjct: 114 GTT 116
Score = 41.1 bits (96), Expect = 6e-04
Identities = 11/63 (17%), Positives = 25/63 (39%)
Query: 1825 TKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLP 1884
+K G+ +Q + F+ + I + + AG+Y ++ S +F + +
Sbjct: 54 SKAGKHLQLKETFERHSRVYTFEMQIIKAKDNFAGNYRCEVTYKDKFDSCSFDLEVHEST 113
Query: 1885 GPP 1887
G
Sbjct: 114 GTT 116
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET:
D15; 2.40A {Homo sapiens}
Length = 311
Score = 78.4 bits (194), Expect = 2e-15
Identities = 32/86 (37%), Positives = 48/86 (55%), Gaps = 6/86 (6%)
Query: 820 DHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRK----EIDIMNQLH 875
+ Y+ + +IG G++GVV +CR R TG I A K S + +I+K EI ++ QL
Sbjct: 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESE--DDPVIKKIALREIRMLKQLK 60
Query: 876 HPKLINLHDAFEDDDEMVLIFEVLDR 901
HP L+NL + F + L+FE D
Sbjct: 61 HPNLVNLLEVFRRKRRLHLVFEYCDH 86
>1he7_A High affinity nerve growth factor receptor; transferase,
TRK-receptor, strand-swapping; 2.0A {Homo sapiens} SCOP:
b.1.1.4 PDB: 1wwa_X 1www_X
Length = 126
Score = 73.8 bits (181), Expect = 2e-15
Identities = 19/105 (18%), Positives = 33/105 (31%), Gaps = 7/105 (6%)
Query: 579 PPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVET-------SERH 631
P + + + G P P + W + V+ E + RH
Sbjct: 3 MPASVQLHTAVEMHHWCIPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRH 62
Query: 632 AILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQISDRPDPPQFP 676
L + ++V+ Y ++A N G SA + D P
Sbjct: 63 GCLRLNQPTHVNNGNYTLLAANPFGQASASIMAAFMDNPFEFNPE 107
Score = 69.2 bits (169), Expect = 7e-14
Identities = 23/83 (27%), Positives = 30/83 (36%), Gaps = 7/83 (8%)
Query: 109 TLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFR-------LHFNEVTDVDNGDY 161
+ G P P RWL NG ++ + E L N+ T V+NG+Y
Sbjct: 19 CIPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNY 78
Query: 162 TCEAYNSVGFAHTSSRVKIGTPP 184
T A N G A S P
Sbjct: 79 TLLAANPFGQASASIMAAFMDNP 101
Score = 69.2 bits (169), Expect = 7e-14
Identities = 23/83 (27%), Positives = 30/83 (36%), Gaps = 7/83 (8%)
Query: 1716 TLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFR-------LHFNEVTDVDNGDY 1768
+ G P P RWL NG ++ + E L N+ T V+NG+Y
Sbjct: 19 CIPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNY 78
Query: 1769 TCEAYNSVGFAHTSSRVKIGTPP 1791
T A N G A S P
Sbjct: 79 TLLAANPFGQASASIMAAFMDNP 101
Score = 67.7 bits (165), Expect = 3e-13
Identities = 19/107 (17%), Positives = 33/107 (30%), Gaps = 10/107 (9%)
Query: 481 PEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTY---- 536
P + + A++ H+ ++ G P P++ WL + ++
Sbjct: 4 PASV---QLHTAVEMHHWCIPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETV 60
Query: 537 ---TLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPP 580
L +N V+ Y A N G S M P P
Sbjct: 61 RHGCLRLNQPTHVNNGNYTLLAANPFGQASASIMAAFMDNPFEFNPE 107
Score = 67.7 bits (165), Expect = 3e-13
Identities = 19/107 (17%), Positives = 33/107 (30%), Gaps = 10/107 (9%)
Query: 2088 PEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTY---- 2143
P + + A++ H+ ++ G P P++ WL + ++
Sbjct: 4 PASV---QLHTAVEMHHWCIPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETV 60
Query: 2144 ---TLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPP 2187
L +N V+ Y A N G S M P P
Sbjct: 61 RHGCLRLNQPTHVNNGNYTLLAANPFGQASASIMAAFMDNPFEFNPE 107
Score = 64.2 bits (156), Expect = 4e-12
Identities = 23/110 (20%), Positives = 38/110 (34%), Gaps = 8/110 (7%)
Query: 1152 EEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQTIYRNKSAK------RATDS 1205
+ I G+P P+ W NG ++ I E E + ++
Sbjct: 16 HHWCIPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNN 75
Query: 1206 GSYTIQLVNTVGSDSASCKVYVVDKP--SPPQGPLDVSDITPESCSLSWK 1253
G+YT+ N G SAS +D P P+ P+ ++ T
Sbjct: 76 GNYTLLAANPFGQASASIMAAFMDNPFEFNPEDPIPDTNSTSGDPVEKKD 125
Score = 49.2 bits (117), Expect = 9e-07
Identities = 21/107 (19%), Positives = 38/107 (35%), Gaps = 6/107 (5%)
Query: 1435 KAGEDFSIHVPFMAFPQPAAFWFANDSIIDDSDTRVHKQL------TMNSASLVVKNSQR 1488
+ I P P+ W N S+++++ + L T+ L +
Sbjct: 13 VEMHHWCIPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTH 72
Query: 1489 SDGGQYRLQLKNPAGFDTATLHSRLRTLPDSVNPRCHLPSSTSKERP 1535
+ G Y L NP G +A++ + P NP +P + S
Sbjct: 73 VNNGNYTLLAANPFGQASASIMAAFMDNPFEFNPEDPIPDTNSTSGD 119
Score = 48.0 bits (114), Expect = 2e-06
Identities = 14/90 (15%), Positives = 28/90 (31%), Gaps = 9/90 (10%)
Query: 219 KNGRVVQSDDRFKFTVLDD-------YIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTI 271
NG V+ L+ + + + + + G+YT+ +N G S +
Sbjct: 36 FNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQASASIMA 95
Query: 272 NITGLP--GPPIGPLDVSEITKHTCTLHWN 299
P P P+ + T +
Sbjct: 96 AFMDNPFEFNPEDPIPDTNSTSGDPVEKKD 125
Score = 48.0 bits (114), Expect = 2e-06
Identities = 14/90 (15%), Positives = 28/90 (31%), Gaps = 9/90 (10%)
Query: 1826 KNGRVVQSDDRFKFTVLDD-------YIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTI 1878
NG V+ L+ + + + + + G+YT+ +N G S +
Sbjct: 36 FNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQASASIMA 95
Query: 1879 NITGLP--GPPIGPLDVSEITKHTCTLHWN 1906
P P P+ + T +
Sbjct: 96 AFMDNPFEFNPEDPIPDTNSTSGDPVEKKD 125
>2ckn_A Basic fibroblast growth factor receptor 1; kinase, transferase,
heparin-binding, nucleotide-binding, immunoglobulin
domain, alternatice splicing; NMR {Mus musculus}
Length = 95
Score = 71.4 bits (175), Expect = 6e-15
Identities = 22/90 (24%), Positives = 35/90 (38%), Gaps = 5/90 (5%)
Query: 91 PDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHF 150
V ++ L+V G LL L+C V WLR+G ++ R R+ +
Sbjct: 10 WGVPVEVESLLVHPGDLLQLRCRLRD-DVQSINWLRDGVQLVESNRTRITGE----EVEV 64
Query: 151 NEVTDVDNGDYTCEAYNSVGFAHTSSRVKI 180
+ D+G Y C + G T V +
Sbjct: 65 RDSIPADSGLYACVTSSPSGSDTTYFSVNV 94
Score = 71.4 bits (175), Expect = 6e-15
Identities = 22/90 (24%), Positives = 35/90 (38%), Gaps = 5/90 (5%)
Query: 1698 PDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHF 1757
V ++ L+V G LL L+C V WLR+G ++ R R+ +
Sbjct: 10 WGVPVEVESLLVHPGDLLQLRCRLRD-DVQSINWLRDGVQLVESNRTRITGE----EVEV 64
Query: 1758 NEVTDVDNGDYTCEAYNSVGFAHTSSRVKI 1787
+ D+G Y C + G T V +
Sbjct: 65 RDSIPADSGLYACVTSSPSGSDTTYFSVNV 94
Score = 65.2 bits (159), Expect = 1e-12
Identities = 17/96 (17%), Positives = 35/96 (36%), Gaps = 5/96 (5%)
Query: 475 PMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGD 534
P A+ + V + + Q +C + +I+WL+ ++ S R I E
Sbjct: 4 PEQAQPWGVPVEVESLLVHPGDLLQLRCRLRD-DVQSINWLRDGVQLVESNRTRITGE-- 60
Query: 535 TYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELII 570
+ + D+ Y C + G +T + +
Sbjct: 61 --EVEVRDSIPADSGLYACVTSSPSGSDTTYFSVNV 94
Score = 65.2 bits (159), Expect = 1e-12
Identities = 17/96 (17%), Positives = 35/96 (36%), Gaps = 5/96 (5%)
Query: 2082 PMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGD 2141
P A+ + V + + Q +C + +I+WL+ ++ S R I E
Sbjct: 4 PEQAQPWGVPVEVESLLVHPGDLLQLRCRLRD-DVQSINWLRDGVQLVESNRTRITGE-- 60
Query: 2142 TYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELII 2177
+ + D+ Y C + G +T + +
Sbjct: 61 --EVEVRDSIPADSGLYACVTSSPSGSDTTYFSVNV 94
Score = 60.2 bits (146), Expect = 6e-11
Identities = 16/99 (16%), Positives = 33/99 (33%), Gaps = 8/99 (8%)
Query: 572 TAPKFNVPPRFR---DTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETS 628
T P+ P ++ G+ + ++ I W RD + +
Sbjct: 2 TLPEQAQPWGVPVEVESLLVHPGDLLQLRCRLRDDV-QSINWLRDGVQLVESNRTRITGE 60
Query: 629 ERHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQIS 667
+ +RD+ D+ Y V + G D+ + +S
Sbjct: 61 ----EVEVRDSIPADSGLYACVTSSPSGSDTTYFSVNVS 95
Score = 54.8 bits (132), Expect = 4e-09
Identities = 16/96 (16%), Positives = 43/96 (44%), Gaps = 5/96 (5%)
Query: 179 KIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDY 238
+ P + +L + GD +++ D ++ ++G + +R + + +
Sbjct: 5 EQAQPWGVPVEVESLLVHPGDLLQLR-CRLRDDVQSINWLRDGVQLVESNRTR--ITGEE 61
Query: 239 IIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINIT 274
+ + ++ D+G Y S+ SGS + F++N++
Sbjct: 62 VEV--RDSIPADSGLYACVTSSPSGSDTTYFSVNVS 95
Score = 54.8 bits (132), Expect = 4e-09
Identities = 16/96 (16%), Positives = 43/96 (44%), Gaps = 5/96 (5%)
Query: 1786 KIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDY 1845
+ P + +L + GD +++ D ++ ++G + +R + + +
Sbjct: 5 EQAQPWGVPVEVESLLVHPGDLLQLR-CRLRDDVQSINWLRDGVQLVESNRTR--ITGEE 61
Query: 1846 IIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINIT 1881
+ + ++ D+G Y S+ SGS + F++N++
Sbjct: 62 VEV--RDSIPADSGLYACVTSSPSGSDTTYFSVNVS 95
Score = 47.1 bits (112), Expect = 2e-06
Identities = 19/97 (19%), Positives = 33/97 (34%), Gaps = 6/97 (6%)
Query: 1131 PPCAPKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSEN 1190
P A + + + V G+ + + W +G ++ R + T E
Sbjct: 4 PEQAQPWGVPVEVESLLVHPGDLLQLRCRLRDDV-QSINWLRDGVQLVESNRTRI-TGEE 61
Query: 1191 QTIYRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYV 1227
+ + A DSG Y + GSD+ V V
Sbjct: 62 VEVRDSIPA----DSGLYACVTSSPSGSDTTYFSVNV 94
Score = 36.7 bits (85), Expect = 0.011
Identities = 16/94 (17%), Positives = 33/94 (35%), Gaps = 6/94 (6%)
Query: 1417 EQPNKPVMDLSGVRDITVKAGEDFSIHVPFMAFPQPAAFWFANDSIIDDSDTRVHKQLTM 1476
+ +P V + V G+ + + W + + +S+ R +
Sbjct: 4 PEQAQPWGVPVEVESLLVHPGDLLQLRCRLRD-DVQSINWLRDGVQLVESN-RTR----I 57
Query: 1477 NSASLVVKNSQRSDGGQYRLQLKNPAGFDTATLH 1510
+ V++S +D G Y +P+G DT
Sbjct: 58 TGEEVEVRDSIPADSGLYACVTSSPSGSDTTYFS 91
>3shs_A HOC head outer capsid protein; immunoglobulin-like domain, phage
capsid decorative protein, interaction with bacteria;
1.95A {Enterobacteria phage RB49}
Length = 304
Score = 76.8 bits (188), Expect = 7e-15
Identities = 27/214 (12%), Positives = 56/214 (26%), Gaps = 33/214 (15%)
Query: 480 APEIIVPLRNANAIQNHNAQFQCTITGC-PKP---TISWLKGSREITPSARHHIFAEGDT 535
A + + + T+ G P P T +W K + +T
Sbjct: 2 AFTVSIQSNKRCFLAGDGFTLTATVAGDEPLPSNLTYTWTKDDQPHE----------NNT 51
Query: 536 YTLIINSVYGVDADEYVCRAVNKGGVKSTKAELII---MTAPKFNVPPRFR-----DTAY 587
TL + +A Y + + S ++E+ + P+
Sbjct: 52 ATLTVADATSENAGSYKVTVQDTDTMTSVESEVFLMEEAELIVNITEPQHFYVSSQTDVE 111
Query: 588 FDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAPY 647
+ +W + +VI++ +TI++ + Y
Sbjct: 112 LHATVKFSGGKTPADNYELHYSWSKGEDVIDTT-----------QDITIQEFTADKNGVY 160
Query: 648 RVVAENDLGMDSAIVKIQISDRPDPPQFPTVEDI 681
V + +A +I VE
Sbjct: 161 TVKVWGESEDSAASASTKIMLATMNVDQDVVESK 194
Score = 75.6 bits (185), Expect = 2e-14
Identities = 30/219 (13%), Positives = 65/219 (29%), Gaps = 26/219 (11%)
Query: 91 PDFIVPLKDLVVPLGKLLTLQCEATG-TPVPKC---RWLRNGREISSGARYRVETAGGVF 146
+ G TL G P+P W ++ + + TA
Sbjct: 3 FTVSIQSNKRCFLAGDGFTLTATVAGDEPLPSNLTYTWTKDDQPHENN------TAT--- 53
Query: 147 RLHFNEVTDVDNGDYTCEAYNSVGFAHTSSR---VKIGTPPRIDRMPNALYIPEGDNTK- 202
L + T + G Y ++ S ++ P Y+ + +
Sbjct: 54 -LTVADATSENAGSYKVTVQDTDTMTSVESEVFLMEEAELIVNITEPQHFYVSSQTDVEL 112
Query: 203 -VKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNS 261
+ ++G + + + + +D V+D I I+E + G YTV +
Sbjct: 113 HATVKFSGGKTPADNYELHYSWSKGED-----VIDTTQDITIQEFTADKNGVYTVKVWGE 167
Query: 262 SGSVSGTFTINITGLPGPPIGP--LDVSEITKHTCTLHW 298
S + + + I + + +L++
Sbjct: 168 SEDSAASASTKIMLATMNVDQDVVESKTVALGNEISLNY 206
Score = 75.6 bits (185), Expect = 2e-14
Identities = 30/219 (13%), Positives = 65/219 (29%), Gaps = 26/219 (11%)
Query: 1698 PDFIVPLKDLVVPLGKLLTLQCEATG-TPVPKC---RWLRNGREISSGARYRVETAGGVF 1753
+ G TL G P+P W ++ + + TA
Sbjct: 3 FTVSIQSNKRCFLAGDGFTLTATVAGDEPLPSNLTYTWTKDDQPHENN------TAT--- 53
Query: 1754 RLHFNEVTDVDNGDYTCEAYNSVGFAHTSSR---VKIGTPPRIDRMPNALYIPEGDNTK- 1809
L + T + G Y ++ S ++ P Y+ + +
Sbjct: 54 -LTVADATSENAGSYKVTVQDTDTMTSVESEVFLMEEAELIVNITEPQHFYVSSQTDVEL 112
Query: 1810 -VKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNS 1868
+ ++G + + + + +D V+D I I+E + G YTV +
Sbjct: 113 HATVKFSGGKTPADNYELHYSWSKGED-----VIDTTQDITIQEFTADKNGVYTVKVWGE 167
Query: 1869 SGSVSGTFTINITGLPGPPIGP--LDVSEITKHTCTLHW 1905
S + + + I + + +L++
Sbjct: 168 SEDSAASASTKIMLATMNVDQDVVESKTVALGNEISLNY 206
Score = 74.1 bits (181), Expect = 7e-14
Identities = 37/273 (13%), Positives = 73/273 (26%), Gaps = 48/273 (17%)
Query: 424 WQRVNVAIC-APSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPE 482
W + + + + + + ++V Q+ ++ S ++ +
Sbjct: 40 WTKDDQPHENNTATLTVADATSENAGSYKVTVQDTDTMTSVESEVFLMEEAEL-----IV 94
Query: 483 IIVPLRNANAIQNHNAQFQCTI---TGCPKP-----TISWLKGSREITPSARHHIFAEGD 534
I ++ + + T+ G SW KG I
Sbjct: 95 NITEPQHFYVSSQTDVELHATVKFSGGKTPADNYELHYSWSKGEDVI-----------DT 143
Query: 535 TYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPRFRD-------TAY 587
T + I Y + + + A IM A
Sbjct: 144 TQDITIQEFTADKNGVYTVKVWGESEDSAASASTKIMLATMNVDQDVVESKTVALGNEIS 203
Query: 588 FDKGENVVVKIPFTGYPKPKIT--WYRDNE-----------VIESGGHFHVETSERHAIL 634
+ + + +G P I WY E V E+ F + L
Sbjct: 204 LNYVVSEDIVGDSSGMPNLTIKYNWYLQREGQLSPTLIGSEVGEALEGFSITPDGH---L 260
Query: 635 TIRDASNVDTAPYRVVAENDLGMDSAIVKIQIS 667
A+ DTA + VA+ ++ V++ S
Sbjct: 261 FKESATYDDTAKFWCVAKLYQQIEDETVEVAAS 293
Score = 62.2 bits (150), Expect = 5e-10
Identities = 28/255 (10%), Positives = 65/255 (25%), Gaps = 46/255 (18%)
Query: 46 SFSVLNLVEGNDYEFRIIAVNAIGKSEPSICTTPVKICEFVGGEKPDFIVPLKDLVVPLG 105
+ +V + N +++ + + ++ E I + V
Sbjct: 53 TLTVADATSENAGSYKVTVQDTDTMTSVESEVFLMEEAE-----LIVNITEPQHFYVSSQ 107
Query: 106 KLLTLQCE---ATGTPVPKC-----RWLRNGREISSGARYRVETAGGVFRLHFNEVTDVD 157
+ L + G W + I + + E T
Sbjct: 108 TDVELHATVKFSGGKTPADNYELHYSWSKGEDVIDTTQD-----------ITIQEFTADK 156
Query: 158 NGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMP--NALYIPEGDNTKVKIFYAGDQPMEV 215
NG YT + + + S+ KI + + G+ + + D +
Sbjct: 157 NGVYTVKVWGESEDSAASASTKIMLATMNVDQDVVESKTVALGNEISLNYVVSEDIVGDS 216
Query: 216 S------------LTKNGRVV-------QSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTV 256
S L + G++ + F++ D +F + +D +
Sbjct: 217 SGMPNLTIKYNWYLQREGQLSPTLIGSEVGEALEGFSITPD-GHLFKESATYDDTAKFWC 275
Query: 257 NLSNSSGSVSGTFTI 271
T +
Sbjct: 276 VAKLYQQIEDETVEV 290
Score = 62.2 bits (150), Expect = 5e-10
Identities = 28/255 (10%), Positives = 65/255 (25%), Gaps = 46/255 (18%)
Query: 1653 SFSVLNLVEGNDYEFRIIAVNAIGKSEPSICTTPVKICEFVGGEKPDFIVPLKDLVVPLG 1712
+ +V + N +++ + + ++ E I + V
Sbjct: 53 TLTVADATSENAGSYKVTVQDTDTMTSVESEVFLMEEAE-----LIVNITEPQHFYVSSQ 107
Query: 1713 KLLTLQCE---ATGTPVPKC-----RWLRNGREISSGARYRVETAGGVFRLHFNEVTDVD 1764
+ L + G W + I + + E T
Sbjct: 108 TDVELHATVKFSGGKTPADNYELHYSWSKGEDVIDTTQD-----------ITIQEFTADK 156
Query: 1765 NGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMP--NALYIPEGDNTKVKIFYAGDQPMEV 1822
NG YT + + + S+ KI + + G+ + + D +
Sbjct: 157 NGVYTVKVWGESEDSAASASTKIMLATMNVDQDVVESKTVALGNEISLNYVVSEDIVGDS 216
Query: 1823 S------------LTKNGRVV-------QSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTV 1863
S L + G++ + F++ D +F + +D +
Sbjct: 217 SGMPNLTIKYNWYLQREGQLSPTLIGSEVGEALEGFSITPD-GHLFKESATYDDTAKFWC 275
Query: 1864 NLSNSSGSVSGTFTI 1878
T +
Sbjct: 276 VAKLYQQIEDETVEV 290
Score = 57.9 bits (139), Expect = 1e-08
Identities = 34/227 (14%), Positives = 71/227 (31%), Gaps = 30/227 (13%)
Query: 1134 APKITSDLSIRDMTVLAGEEFTITVPFSG-RPKPTPI---WTVNGDEVSPDGRIKFETSE 1189
A ++ + LAG+ FT+T +G P P+ + WT + + T+
Sbjct: 2 AFTVSIQSN--KRCFLAGDGFTLTATVAGDEPLPSNLTYTWTKDDQPHENN------TAT 53
Query: 1190 NQTIYRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYVVDKPSPP---QGPLDVSDITPE 1246
+ + ++GSY + + +T S +V+++++ P +
Sbjct: 54 LTV-----ADATSENAGSYKVTVQDTDTMTSVESEVFLMEEAELIVNITEPQHFYVSSQT 108
Query: 1247 SCSLSWKPPLDDGGSPITNYVVEKYESATGFWSKLSSFV-RSPAYDVFGLETNRQYRFRV 1305
L G +P NY + WSK + + + ++ + V
Sbjct: 109 DVELHATVKFSGGKTPADNYEL------HYSWSKGEDVIDTTQDITIQEFTADKNGVYTV 162
Query: 1306 RAENQYGVSEPLELDNSITAKFPFTVPDPPGQPQIVDWDTNNATLMW 1352
+ + S S D N +L +
Sbjct: 163 KVWGESEDSAA---SASTKIMLATMNVDQDVVESKTVALGNEISLNY 206
Score = 51.8 bits (123), Expect = 1e-06
Identities = 18/142 (12%), Positives = 35/142 (24%), Gaps = 15/142 (10%)
Query: 2087 APEIIVPLRNANAIQNHNAQFQCTITGC-PKP---TISWLKGSREITPSARHHIFAEGDT 2142
A + + + T+ G P P T +W K + +T
Sbjct: 2 AFTVSIQSNKRCFLAGDGFTLTATVAGDEPLPSNLTYTWTKDDQPHE----------NNT 51
Query: 2143 YTLIINSVYGVDADEYVCRAVNKGG-VKSTKAELIIMTAPKFNVPPRFRDTAYFESDVVV 2201
TL + +A Y + ++ A + V
Sbjct: 52 ATLTVADATSENAGSYKVTVQDTDTMTSVESEVFLMEEAELIVNITEPQHFYVSSQTDVE 111
Query: 2202 VVCVCFFLMIRRPPRSTLFPYT 2223
+ F + P + Y+
Sbjct: 112 LHATVKFSGGKTPADNYELHYS 133
Score = 51.8 bits (123), Expect = 1e-06
Identities = 26/178 (14%), Positives = 48/178 (26%), Gaps = 27/178 (15%)
Query: 1094 RVTSLIENHEYEFRVCAVNAAGQGPWSSSSDIIMCCAPPCAPKITSDLSIRDMTVLAGE- 1152
V + ++V + S ++ V +
Sbjct: 55 TVADATSENAGSYKVTVQDTDTMTSVESEVFLMEEAELIVNITEPQHF-----YVSSQTD 109
Query: 1153 -EFTITVPFSGRPKPTPI------WTVNGDEVSPDGRIKFETSENQTIYRNKSAKRATDS 1205
E TV FSG P W+ D + T+++ TI A +
Sbjct: 110 VELHATVKFSGGKTPADNYELHYSWSKGEDVID--------TTQDITI----QEFTADKN 157
Query: 1206 GSYTIQLVNTVGSDSASCKVYVVDKPSPPQGP--LDVSDITPESCSLSWKPPLDDGGS 1261
G YT+++ +AS ++ + SL++ D G
Sbjct: 158 GVYTVKVWGESEDSAASASTKIMLATMNVDQDVVESKTVALGNEISLNYVVSEDIVGD 215
Score = 50.6 bits (120), Expect = 3e-06
Identities = 36/266 (13%), Positives = 73/266 (27%), Gaps = 38/266 (14%)
Query: 334 TTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDF 393
T V T + V + + M + ++ + P V+
Sbjct: 52 ATLTVADATSENAGSYKVTVQDTDTMTSVESEVFLMEEAELIVNITEPQHFYVSS--QTD 109
Query: 394 VNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVY 453
V L G + Y + +W + I I I + + V
Sbjct: 110 VELHATVKFSGGKTPADNYEL------HYSWSKGEDVIDTTQDITIQEFTADKNGVYTVK 163
Query: 454 AQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTI--------T 505
E+ S ++++++ + M + + + + +
Sbjct: 164 VWGESEDS--AASASTKIMLATMNVDQD----VVESKTVALGNEISLNYVVSEDIVGDSS 217
Query: 506 GCPKPTISW-------------LKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYV 552
G P TI + L GS I +G L S D ++
Sbjct: 218 GMPNLTIKYNWYLQREGQLSPTLIGSEVGEALEGFSITPDGH---LFKESATYDDTAKFW 274
Query: 553 CRAVNKGGVKSTKAELIIMTAPKFNV 578
C A ++ E+ T+ K ++
Sbjct: 275 CVAKLYQQIEDETVEVAASTSRKCSM 300
Score = 50.6 bits (120), Expect = 3e-06
Identities = 36/266 (13%), Positives = 73/266 (27%), Gaps = 38/266 (14%)
Query: 1941 TTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDF 2000
T V T + V + + M + ++ + P V+
Sbjct: 52 ATLTVADATSENAGSYKVTVQDTDTMTSVESEVFLMEEAELIVNITEPQHFYVSS--QTD 109
Query: 2001 VNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVY 2060
V L G + Y + +W + I I I + + V
Sbjct: 110 VELHATVKFSGGKTPADNYEL------HYSWSKGEDVIDTTQDITIQEFTADKNGVYTVK 163
Query: 2061 AQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTI--------T 2112
E+ S ++++++ + M + + + + +
Sbjct: 164 VWGESEDS--AASASTKIMLATMNVDQD----VVESKTVALGNEISLNYVVSEDIVGDSS 217
Query: 2113 GCPKPTISW-------------LKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYV 2159
G P TI + L GS I +G L S D ++
Sbjct: 218 GMPNLTIKYNWYLQREGQLSPTLIGSEVGEALEGFSITPDGH---LFKESATYDDTAKFW 274
Query: 2160 CRAVNKGGVKSTKAELIIMTAPKFNV 2185
C A ++ E+ T+ K ++
Sbjct: 275 CVAKLYQQIEDETVEVAASTSRKCSM 300
Score = 41.0 bits (95), Expect = 0.003
Identities = 34/239 (14%), Positives = 71/239 (29%), Gaps = 39/239 (16%)
Query: 183 PPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLT----KNGRVVQSDDRFKFTVLDDY 238
+ N GD + AGD+P+ +LT K+ + +++
Sbjct: 2 AFTVSIQSNKRCFLAGDGFTLTATVAGDEPLPSNLTYTWTKDDQPHENNTA--------- 52
Query: 239 IIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPI---GPLDVSEITKHTCT 295
+ + + E+AG Y V + ++ S + + + P ++
Sbjct: 53 -TLTVADATSENAGSYKVTVQDTDTMTSVESEVFLMEEAELIVNITEPQHFYVSSQTDVE 111
Query: 296 LHW-------NPPKYDGGLKVTHYVVERRDISMPHWICISTTCHDTTFIVQGLTEGQEYL 348
LH P + L + + + I TT +Q T + +
Sbjct: 112 LHATVKFSGGKTPADNYELHYSWS----KGEDV-----IDTT---QDITIQEFTADKNGV 159
Query: 349 FHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGS 407
+ V E+ K + T G+ ++L++ D G
Sbjct: 160 YTVKVWGESEDS---AASASTKIMLATMNVDQDVVESKTVALGNEISLNYVVSEDIVGD 215
Score = 41.0 bits (95), Expect = 0.003
Identities = 34/239 (14%), Positives = 71/239 (29%), Gaps = 39/239 (16%)
Query: 1790 PPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLT----KNGRVVQSDDRFKFTVLDDY 1845
+ N GD + AGD+P+ +LT K+ + +++
Sbjct: 2 AFTVSIQSNKRCFLAGDGFTLTATVAGDEPLPSNLTYTWTKDDQPHENNTA--------- 52
Query: 1846 IIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPI---GPLDVSEITKHTCT 1902
+ + + E+AG Y V + ++ S + + + P ++
Sbjct: 53 -TLTVADATSENAGSYKVTVQDTDTMTSVESEVFLMEEAELIVNITEPQHFYVSSQTDVE 111
Query: 1903 LHW-------NPPKYDGGLKVTHYVVERRDISMPHWICISTTCHDTTFIVQGLTEGQEYL 1955
LH P + L + + + I TT +Q T + +
Sbjct: 112 LHATVKFSGGKTPADNYELHYSWS----KGEDV-----IDTT---QDITIQEFTADKNGV 159
Query: 1956 FHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGS 2014
+ V E+ K + T G+ ++L++ D G
Sbjct: 160 YTVKVWGESEDS---AASASTKIMLATMNVDQDVVESKTVALGNEISLNYVVSEDIVGD 215
Score = 37.5 bits (86), Expect = 0.038
Identities = 17/172 (9%), Positives = 53/172 (30%), Gaps = 32/172 (18%)
Query: 1372 TPTGELPTTIWSK----IRPTSSTVYCKDTTMNS--------SNSEPGKQSGPVIVEEQP 1419
P T W+K ++T+ D T + +++ + +
Sbjct: 30 EPLPSNLTYTWTKDDQPHENNTATLTVADATSENAGSYKVTVQDTDTMTSVESEVFLMEE 89
Query: 1420 NKPVMDLSGVRDITVKAGEDFSIHV--------PFMAFPQPAAFWFANDSIIDDSDTRVH 1471
+ +++++ + V + D +H + W + +ID
Sbjct: 90 AELIVNITEPQHFYVSSQTDVELHATVKFSGGKTPADNYELHYSWSKGEDVID------- 142
Query: 1472 KQLTMNSASLVVKNSQRSDGGQYRLQLKNPAGFDTATLHSRLRTLPDSVNPR 1523
+ + ++ G Y +++ + A+ +++ +V+
Sbjct: 143 -----TTQDITIQEFTADKNGVYTVKVWGESEDSAASASTKIMLATMNVDQD 189
Score = 36.0 bits (82), Expect = 0.13
Identities = 22/158 (13%), Positives = 42/158 (26%), Gaps = 24/158 (15%)
Query: 46 SFSVLNLVEGNDYEFRIIAVNAIGKSEPSICTTPVKICEFVGGEKPDFIVPLKDLVVPLG 105
++ + + + S S T + V ++ V LG
Sbjct: 146 DITIQEFTADKNGVYTVKVWGESEDSAASASTKIMLATMNVD------QDVVESKTVALG 199
Query: 106 KLLTLQC--------EATGTPVPKCRW----LRNGREISSGARYRVETAGGVF------R 147
++L +++G P ++ R G+ + V A F
Sbjct: 200 NEISLNYVVSEDIVGDSSGMPNLTIKYNWYLQREGQLSPTLIGSEVGEALEGFSITPDGH 259
Query: 148 LHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPR 185
L T D + C A + V T +
Sbjct: 260 LFKESATYDDTAKFWCVAKLYQQIEDETVEVAASTSRK 297
Score = 36.0 bits (82), Expect = 0.13
Identities = 22/158 (13%), Positives = 42/158 (26%), Gaps = 24/158 (15%)
Query: 1653 SFSVLNLVEGNDYEFRIIAVNAIGKSEPSICTTPVKICEFVGGEKPDFIVPLKDLVVPLG 1712
++ + + + S S T + V ++ V LG
Sbjct: 146 DITIQEFTADKNGVYTVKVWGESEDSAASASTKIMLATMNVD------QDVVESKTVALG 199
Query: 1713 KLLTLQC--------EATGTPVPKCRW----LRNGREISSGARYRVETAGGVF------R 1754
++L +++G P ++ R G+ + V A F
Sbjct: 200 NEISLNYVVSEDIVGDSSGMPNLTIKYNWYLQREGQLSPTLIGSEVGEALEGFSITPDGH 259
Query: 1755 LHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPR 1792
L T D + C A + V T +
Sbjct: 260 LFKESATYDDTAKFWCVAKLYQQIEDETVEVAASTSRK 297
>2e7h_A Ephrin type-B receptor 4; FN3 domain, tyrosine- protein kinase
receptor HTK, structural genomics, NPPSFA; NMR {Homo
sapiens}
Length = 109
Score = 71.7 bits (176), Expect = 8e-15
Identities = 22/97 (22%), Positives = 30/97 (30%), Gaps = 3/97 (3%)
Query: 670 PDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSW--IRVGNTRFTTM 727
P V SL+L W P G + +Y V+ E +R T
Sbjct: 8 PPAVSDIRVTRSSPSSLSLAWAVPRAPSG-AVLDYEVKYHEKGAEGPSSVRFLKTSENRA 66
Query: 728 AITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKD 764
+ GL G Y +V A + G T D
Sbjct: 67 ELRGLKRGASYLVQVRARSEAGYGPFGQEHHSQTQLD 103
Score = 68.3 bits (167), Expect = 1e-13
Identities = 23/101 (22%), Positives = 39/101 (38%), Gaps = 2/101 (1%)
Query: 371 AKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVA 430
S P VT+ ++L+W P G + Y + HE G++ V
Sbjct: 1 GSSGSSGPPAVSDIRVTRSSPSSLSLAWAVPRAPSG-AVLDYEVKYHEKGAEGPSSVRFL 59
Query: 431 ICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQ 471
+ ++ + L G Y +V A++EAG P + Q
Sbjct: 60 KTSENRAELRGLKRGASYLVQVRARSEAGYG-PFGQEHHSQ 99
Score = 68.3 bits (167), Expect = 1e-13
Identities = 23/101 (22%), Positives = 39/101 (38%), Gaps = 2/101 (1%)
Query: 1978 AKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVA 2037
S P VT+ ++L+W P G + Y + HE G++ V
Sbjct: 1 GSSGSSGPPAVSDIRVTRSSPSSLSLAWAVPRAPSG-AVLDYEVKYHEKGAEGPSSVRFL 59
Query: 2038 ICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQ 2078
+ ++ + L G Y +V A++EAG P + Q
Sbjct: 60 KTSENRAELRGLKRGASYLVQVRARSEAGYG-PFGQEHHSQ 99
Score = 66.3 bits (162), Expect = 5e-13
Identities = 20/126 (15%), Positives = 32/126 (25%), Gaps = 33/126 (26%)
Query: 1000 DVPGAPGAPKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDT 1059
P A + S+ S+SL W+ PR G + Y V+ + +
Sbjct: 6 SGPPAVSDIRVTRSSPSSLSLAWAVPRAPSG-AVLDYEVKYHEKGAEGPSSVRFLKTSEN 64
Query: 1060 SLKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPW 1119
+ L Y +V A + AG GP+
Sbjct: 65 RA--------------------------------ELRGLKRGASYLVQVRARSEAGYGPF 92
Query: 1120 SSSSDI 1125
Sbjct: 93 GQEHHS 98
Score = 62.1 bits (151), Expect = 2e-11
Identities = 20/89 (22%), Positives = 35/89 (39%), Gaps = 3/89 (3%)
Query: 1229 DKPSPPQGPLDVSDITPESCSLSWKPPLDDGGSPITNYVVEKYESATGFWSKLSSF-VRS 1287
P + V+ +P S SL+W P G + +Y V+ +E S +
Sbjct: 6 SGPPAVSD-IRVTRSSPSSLSLAWAVPRAPSG-AVLDYEVKYHEKGAEGPSSVRFLKTSE 63
Query: 1288 PAYDVFGLETNRQYRFRVRAENQYGVSEP 1316
++ GL+ Y +VRA ++ G
Sbjct: 64 NRAELRGLKRGASYLVQVRARSEAGYGPF 92
Score = 59.0 bits (143), Expect = 2e-10
Identities = 22/88 (25%), Positives = 35/88 (39%), Gaps = 5/88 (5%)
Query: 277 PGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVE--RRDISMPHWICISTTCHDT 334
P + V+ + + +L W P+ G V Y V+ + P + T +
Sbjct: 8 PPAV-SDIRVTRSSPSSLSLAWAVPRAPSG-AVLDYEVKYHEKGAEGPSSVRFLKT-SEN 64
Query: 335 TFIVQGLTEGQEYLFHVMAVNENGMGPP 362
++GL G YL V A +E G GP
Sbjct: 65 RAELRGLKRGASYLVQVRARSEAGYGPF 92
Score = 59.0 bits (143), Expect = 2e-10
Identities = 22/88 (25%), Positives = 35/88 (39%), Gaps = 5/88 (5%)
Query: 1884 PGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVE--RRDISMPHWICISTTCHDT 1941
P + V+ + + +L W P+ G V Y V+ + P + T +
Sbjct: 8 PPAV-SDIRVTRSSPSSLSLAWAVPRAPSG-AVLDYEVKYHEKGAEGPSSVRFLKT-SEN 64
Query: 1942 TFIVQGLTEGQEYLFHVMAVNENGMGPP 1969
++GL G YL V A +E G GP
Sbjct: 65 RAELRGLKRGASYLVQVRARSEAGYGPF 92
Score = 57.9 bits (140), Expect = 5e-10
Identities = 21/106 (19%), Positives = 41/106 (38%), Gaps = 5/106 (4%)
Query: 902 PHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTKVSSYVTT-PFV 960
P ++ + SL+L W PR G + +Y V+ + + + V T+
Sbjct: 8 PPAVSDIRVTRSSPSSLSLAWAVPRAPSG-AVLDYEVKYHEKGAEGPSSVRFLKTSENRA 66
Query: 961 RVRNLAIGSTYEFRVMAENQYGLSKPALTIDPIKAKHPFDVPGAPG 1006
+R L G++Y +V A ++ G ++ D + G
Sbjct: 67 ELRGLKRGASYLVQVRARSEAGYGPFG---QEHHSQTQLDSGPSSG 109
Score = 38.2 bits (89), Expect = 0.004
Identities = 16/131 (12%), Positives = 29/131 (22%), Gaps = 49/131 (37%)
Query: 1559 VDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEG 1618
S+ S+SL W+ PR G + Y V+ + + +
Sbjct: 17 TRSSPSSLSLAWAVPRAPSG-AVLDYEVKYHEKGAEGPSSVRFLKTSENRAE-------- 67
Query: 1619 KSIGSERGSTAQFLEREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIG-- 1676
+ L G Y ++ A + G
Sbjct: 68 -------------------------------------LRGLKRGASYLVQVRARSEAGYG 90
Query: 1677 -KSEPSICTTP 1686
+ T
Sbjct: 91 PFGQEHHSQTQ 101
Score = 37.1 bits (86), Expect = 0.010
Identities = 8/63 (12%), Positives = 22/63 (34%), Gaps = 2/63 (3%)
Query: 1330 TVPDPPGQPQIVDWDTNNATLMWDRPRTDGGSKIQGYKMLLKTPTGELPTTIWSKIRPTS 1389
+ P ++ ++ +L W PR G + Y+ + G + ++ +
Sbjct: 6 SGPPAVSDIRVTRSSPSSLSLAWAVPRAPSG-AVLDYE-VKYHEKGAEGPSSVRFLKTSE 63
Query: 1390 STV 1392
+
Sbjct: 64 NRA 66
Score = 36.3 bits (84), Expect = 0.019
Identities = 10/61 (16%), Positives = 17/61 (27%), Gaps = 3/61 (4%)
Query: 22 YIIERREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIG---KSEPSICTT 78
Y ++ E G E + L G Y ++ A + G + T
Sbjct: 41 YEVKYHEKGAEGPSSVRFLKTSENRAELRGLKRGASYLVQVRARSEAGYGPFGQEHHSQT 100
Query: 79 P 79
Sbjct: 101 Q 101
>3n06_B PRL-R, prolactin receptor; PH dependence, hematopoietic cytokine,
hormone-hormone recep complex; 2.00A {Homo sapiens} PDB:
3mzg_B 3n0p_B 3ncb_B 1bp3_B 3d48_R 3nce_B 3ncc_B 3ncf_B
3ew3_B 3npz_B 1f6f_B 2lfg_A
Length = 210
Score = 74.7 bits (183), Expect = 9e-15
Identities = 42/210 (20%), Positives = 70/210 (33%), Gaps = 22/210 (10%)
Query: 279 PPIGPLDVSEITK--HTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWI----CISTTCH 332
PP P + T T W P DGGL T+Y + I+ +
Sbjct: 3 PPGKPEIFKCRSPNKETFTCWWRPGT-DGGLP-TNYSLTYHREGETLMHECPDYITGGPN 60
Query: 333 DTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVT----Q 388
F Q + + Y+ V A N+ G E + +P PP V +
Sbjct: 61 SCHFGKQYTSMWRTYIMMVNATNQMGSSFSDE---LYVDVTYIVQPDPPLELAVEVKQPE 117
Query: 389 VGGDFVNLSWDKPL---DDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEG 445
++ + W P G Y I + W+ ++ I +L G
Sbjct: 118 DRKPYLWIKWSPPTLIDLKTGWFTLLYEIRLKPEKAAEWEIHFA--GQQTEFKILSLHPG 175
Query: 446 RQYEFRVYAQNEAGLSLPSSASNSVQIKDP 475
++Y +V + + G S+ S + I+ P
Sbjct: 176 QKYLVQVRCKPDHG--YWSAWSPATFIQIP 203
Score = 74.7 bits (183), Expect = 9e-15
Identities = 42/210 (20%), Positives = 70/210 (33%), Gaps = 22/210 (10%)
Query: 1886 PPIGPLDVSEITK--HTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWI----CISTTCH 1939
PP P + T T W P DGGL T+Y + I+ +
Sbjct: 3 PPGKPEIFKCRSPNKETFTCWWRPGT-DGGLP-TNYSLTYHREGETLMHECPDYITGGPN 60
Query: 1940 DTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVT----Q 1995
F Q + + Y+ V A N+ G E + +P PP V +
Sbjct: 61 SCHFGKQYTSMWRTYIMMVNATNQMGSSFSDE---LYVDVTYIVQPDPPLELAVEVKQPE 117
Query: 1996 VGGDFVNLSWDKPL---DDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEG 2052
++ + W P G Y I + W+ ++ I +L G
Sbjct: 118 DRKPYLWIKWSPPTLIDLKTGWFTLLYEIRLKPEKAAEWEIHFA--GQQTEFKILSLHPG 175
Query: 2053 RQYEFRVYAQNEAGLSLPSSASNSVQIKDP 2082
++Y +V + + G S+ S + I+ P
Sbjct: 176 QKYLVQVRCKPDHG--YWSAWSPATFIQIP 203
Score = 70.5 bits (172), Expect = 2e-13
Identities = 40/231 (17%), Positives = 65/231 (28%), Gaps = 45/231 (19%)
Query: 902 PHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTKVSSYVTTP--- 958
P PE ++ T +W P D G TNY + T+ + Y+T
Sbjct: 4 PGKPEIFKCRSPNKETFTCWWRPGTDGGLP--TNYSLTYHREGETLMHECPDYITGGPNS 61
Query: 959 -FVRVRNLAIGSTYEFRVMAENQYGLSKPA-LTIDPIKAKHPFDVPGAPGAPKGVDSTED 1016
+ ++ TY V A NQ G S L +D P K + +
Sbjct: 62 CHFGKQYTSMWRTYIMMVNATNQMGSSFSDELYVDVTYIVQPDPPLELAVEVKQPEDRKP 121
Query: 1017 SISLVWSKPRH---DGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEGKSI 1073
+ + WS P G Y + + +W H ++ +
Sbjct: 122 YLWIKWSPPTLIDLKTGWFTLLYEIRLKPEKAAEW----EIHFAGQQTEFKI-------- 169
Query: 1074 GSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQ-GPWSSSS 1123
SL +Y +V G WS ++
Sbjct: 170 ----------------------LSLHPGQKYLVQVRCKPDHGYWSAWSPAT 198
Score = 55.1 bits (132), Expect = 4e-08
Identities = 35/170 (20%), Positives = 57/170 (33%), Gaps = 12/170 (7%)
Query: 608 ITWYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAPYRVVAENDLGM---DSAIVKI 664
+T++R+ E + ++ + S T V A N +G D V +
Sbjct: 38 LTYHREGETLMHECPDYITGGPNSCHFGKQYTSMWRTYIMMVNATNQMGSSFSDELYVDV 97
Query: 665 QISDRPDPPQFPTVE----DIGHDSLALVWRAPI---WDGGSNITNYIVEKREHPMSSWI 717
+PDPP VE + L + W P G Y + + + W
Sbjct: 98 TYIVQPDPPLELAVEVKQPEDRKPYLWIKWSPPTLIDLKTGWFTLLYEIRLKPEKAAEWE 157
Query: 718 RVGNTRFTTMAITGLSPGHQYEFRVYAENVYGR-SDPSTTSDLITTKDTF 766
+ T I L PG +Y +V + +G S S + I F
Sbjct: 158 IHFAGQQTEFKILSLHPGQKYLVQVRCKPDHGYWSAWSPAT-FIQIPSDF 206
Score = 48.5 bits (115), Expect = 6e-06
Identities = 26/113 (23%), Positives = 38/113 (33%), Gaps = 10/113 (8%)
Query: 255 TVNLSNSSGSVS---GTFTINITGLPGPPIGP---LDVSEITKHTCTLHWNPPKY---DG 305
VN +N GS + P PP+ + E K + W+PP
Sbjct: 78 MVNATNQMGSSFSDELYVDVTYIVQPDPPLELAVEVKQPEDRKPYLWIKWSPPTLIDLKT 137
Query: 306 GLKVTHYVVERRDISMPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENG 358
G Y + + W I T F + L GQ+YL V ++G
Sbjct: 138 GWFTLLYEIRLKPEKAAEWE-IHFAGQQTEFKILSLHPGQKYLVQVRCKPDHG 189
Score = 48.5 bits (115), Expect = 6e-06
Identities = 26/113 (23%), Positives = 38/113 (33%), Gaps = 10/113 (8%)
Query: 1862 TVNLSNSSGSVS---GTFTINITGLPGPPIGP---LDVSEITKHTCTLHWNPPKY---DG 1912
VN +N GS + P PP+ + E K + W+PP
Sbjct: 78 MVNATNQMGSSFSDELYVDVTYIVQPDPPLELAVEVKQPEDRKPYLWIKWSPPTLIDLKT 137
Query: 1913 GLKVTHYVVERRDISMPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENG 1965
G Y + + W I T F + L GQ+YL V ++G
Sbjct: 138 GWFTLLYEIRLKPEKAAEWE-IHFAGQQTEFKILSLHPGQKYLVQVRCKPDHG 189
Score = 48.5 bits (115), Expect = 6e-06
Identities = 25/139 (17%), Positives = 45/139 (32%), Gaps = 20/139 (14%)
Query: 1209 TIQLVNTVG---SDSASCKVYVVDKPSPPQGP---LDVSDITPESCSLSWKPP----LDD 1258
+ N +G SD V + +P PP + + + W PP L
Sbjct: 78 MVNATNQMGSSFSDELYVDVTYIVQPDPPLELAVEVKQPEDRKPYLWIKWSPPTLIDLKT 137
Query: 1259 GGSPITNYVVEKYESATGFWSKLSSFVRSPAYDVFGLETNRQYRFRVRAENQYGV----S 1314
G + Y + W ++ + + + L ++Y +VR + +G S
Sbjct: 138 GWFTLL-YEIRLKPEKAAEW-EIHFAGQQTEFKILSLHPGQKYLVQVRCKPDHGYWSAWS 195
Query: 1315 EPLELDNSITAKFPFTVPD 1333
I FT+ D
Sbjct: 196 PAT----FIQIPSDFTMND 210
Score = 47.4 bits (112), Expect = 1e-05
Identities = 20/90 (22%), Positives = 31/90 (34%), Gaps = 8/90 (8%)
Query: 901 RPHPPENLHA----DEFAGDSLTLYWTPPR---DNGGSEITNYVVEKKDYNSTVWTKVSS 953
+P PP L E L + W+PP G Y + K + W +
Sbjct: 102 QPDPPLELAVEVKQPEDRKPYLWIKWSPPTLIDLKTGWFTLLYEIRLKPEKAAEWEIHFA 161
Query: 954 YVTTPFVRVRNLAIGSTYEFRVMAENQYGL 983
T F + +L G Y +V + +G
Sbjct: 162 GQQTEFK-ILSLHPGQKYLVQVRCKPDHGY 190
Score = 46.2 bits (109), Expect = 3e-05
Identities = 30/135 (22%), Positives = 44/135 (32%), Gaps = 15/135 (11%)
Query: 1233 PPQGPLDVSDITPESCSL--SWKPPLDDGGSPITNYVVEKYESATGFWSKLSSFVRSPA- 1289
PP P +P + W+P DGG P TNY + + + ++
Sbjct: 3 PPGKPEIFKCRSPNKETFTCWWRPG-TDGGLP-TNYSLTYHREGETLMHECPDYITGGPN 60
Query: 1290 ---YDVFGLETNRQYRFRVRAENQYGVSEPLELDNSITAKFPFTVPDPPGQPQI----VD 1342
+ R Y V A NQ G S EL +T PDPP + + +
Sbjct: 61 SCHFGKQYTSMWRTYIMMVNATNQMGSSFSDELYVDVT---YIVQPDPPLELAVEVKQPE 117
Query: 1343 WDTNNATLMWDRPRT 1357
+ W P
Sbjct: 118 DRKPYLWIKWSPPTL 132
Score = 35.1 bits (80), Expect = 0.16
Identities = 12/57 (21%), Positives = 17/57 (29%), Gaps = 3/57 (5%)
Query: 21 CYIIERREVGGAIWLKCNDYNVL---ECSFSVLNLVEGNDYEFRIIAVNAIGKSEPS 74
Y + G + +C DY C F Y + A N +G S
Sbjct: 35 NYSLTYHREGETLMHECPDYITGGPNSCHFGKQYTSMWRTYIMMVNATNQMGSSFSD 91
Score = 31.6 bits (71), Expect = 1.9
Identities = 11/51 (21%), Positives = 15/51 (29%), Gaps = 3/51 (5%)
Query: 1634 REVGGAIWLKCNDYNVL---ECSFSVLNLVEGNDYEFRIIAVNAIGKSEPS 1681
G + +C DY C F Y + A N +G S
Sbjct: 41 HREGETLMHECPDYITGGPNSCHFGKQYTSMWRTYIMMVNATNQMGSSFSD 91
Score = 30.1 bits (67), Expect = 7.6
Identities = 12/62 (19%), Positives = 20/62 (32%), Gaps = 6/62 (9%)
Query: 22 YIIERREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGK----SEPSICT 77
Y I + A W + + F +L+L G Y ++ G S +
Sbjct: 144 YEIRLKPEKAAEW--EIHFAGQQTEFKILSLHPGQKYLVQVRCKPDHGYWSAWSPATFIQ 201
Query: 78 TP 79
P
Sbjct: 202 IP 203
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A
{Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Length = 348
Score = 77.1 bits (190), Expect = 9e-15
Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
Query: 820 DHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSH---NLEKELIRKEIDIMNQLHH 876
+ L EIG G+FG V+ R+ + + A K + S N + + I KE+ + +L H
Sbjct: 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRH 113
Query: 877 PKLINLHDAFEDDDEMVLIFE 897
P I + + L+ E
Sbjct: 114 PNTIQYRGCYLREHTAWLVME 134
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci
inhibitory kinase; structural genomics, structural
genomics consortium, SGC; 1.70A {Homo sapiens}
Length = 311
Score = 76.6 bits (189), Expect = 9e-15
Identities = 20/87 (22%), Positives = 37/87 (42%), Gaps = 3/87 (3%)
Query: 814 KTSSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIR--KEIDIM 871
S + L +G G++G V + R ++ G ++A K K+ R E+
Sbjct: 51 PESFFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSH 110
Query: 872 NQL-HHPKLINLHDAFEDDDEMVLIFE 897
++ HP + L A+E+ + L E
Sbjct: 111 EKVGQHPCCVRLEQAWEEGGILYLQTE 137
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody,
immune system; HET: NAG BMA MAN FUC; 2.20A {Homo
sapiens} PDB: 3sgk_C*
Length = 204
Score = 74.1 bits (182), Expect = 1e-14
Identities = 37/196 (18%), Positives = 65/196 (33%), Gaps = 28/196 (14%)
Query: 90 KPDFIVPLKDLVVPLGKLLTLQCEATGTPVP-KCRWLRNGREISSGARYRVETAGGVFRL 148
K + + V +TL+C+ +P +W N ISS A
Sbjct: 7 KAVVFLEPQWYRVLEKDSVTLKCQGAYSPEDQSTQWFHNESLISSQAS----------SY 56
Query: 149 HFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIG--TPPRIDRMPNALYIPEGDNTKVK-I 205
+ T D+G+Y C+ S S V++ + + P E D ++
Sbjct: 57 FIDAATVDDSGEYRCQTQLSTL----SDPVQLEVHIGWLLLQAPRW-VFKEEDPIHLRCH 111
Query: 206 FYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSV 265
+ +V+ +NG+ + +I + +D+G Y S +V
Sbjct: 112 SWKNTALHKVTYLQNGKGRKY--------FHHNSDFYIPKATLKDSGSYFCRGLVGSKNV 163
Query: 266 -SGTFTINITGLPGPP 280
S T I IT
Sbjct: 164 SSETVQITITQGLAVS 179
Score = 74.1 bits (182), Expect = 1e-14
Identities = 37/196 (18%), Positives = 65/196 (33%), Gaps = 28/196 (14%)
Query: 1697 KPDFIVPLKDLVVPLGKLLTLQCEATGTPVP-KCRWLRNGREISSGARYRVETAGGVFRL 1755
K + + V +TL+C+ +P +W N ISS A
Sbjct: 7 KAVVFLEPQWYRVLEKDSVTLKCQGAYSPEDQSTQWFHNESLISSQAS----------SY 56
Query: 1756 HFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIG--TPPRIDRMPNALYIPEGDNTKVK-I 1812
+ T D+G+Y C+ S S V++ + + P E D ++
Sbjct: 57 FIDAATVDDSGEYRCQTQLSTL----SDPVQLEVHIGWLLLQAPRW-VFKEEDPIHLRCH 111
Query: 1813 FYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSV 1872
+ +V+ +NG+ + +I + +D+G Y S +V
Sbjct: 112 SWKNTALHKVTYLQNGKGRKY--------FHHNSDFYIPKATLKDSGSYFCRGLVGSKNV 163
Query: 1873 -SGTFTINITGLPGPP 1887
S T I IT
Sbjct: 164 SSETVQITITQGLAVS 179
Score = 71.5 bits (175), Expect = 9e-14
Identities = 26/178 (14%), Positives = 57/178 (32%), Gaps = 27/178 (15%)
Query: 500 FQCTITGCPKP-TISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNK 558
+C P+ + W I+ A + I++ D+ EY C+ +
Sbjct: 27 LKCQGAYSPEDQSTQWFHNESLISSQAS----------SYFIDAATVDDSGEYRCQT--Q 74
Query: 559 GGVKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVK-IPFTGYPKPKITWYRDNEVI 617
S +L + PR F + + + ++ + K+T+ ++ +
Sbjct: 75 LSTLSDPVQLEVHIGWLLLQAPR----WVFKEEDPIHLRCHSWKNTALHKVTYLQNGKGR 130
Query: 618 ESGGHFHVETSERHAILTIRDASNVDTAPYRVVAENDLG-MDSAIVKIQISDRPDPPQ 674
+ H ++ I A+ D+ Y + S V+I I+
Sbjct: 131 KYFHH--------NSDFYIPKATLKDSGSYFCRGLVGSKNVSSETVQITITQGLAVST 180
Score = 45.6 bits (108), Expect = 4e-05
Identities = 16/99 (16%), Positives = 31/99 (31%), Gaps = 16/99 (16%)
Query: 2107 FQCTITGCPKP-TISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNK 2165
+C P+ + W I+ A + I++ D+ EY C+ +
Sbjct: 27 LKCQGAYSPEDQSTQWFHNESLISSQAS----------SYFIDAATVDDSGEYRCQT--Q 74
Query: 2166 GGVKSTKAELIIMTAPKFNVPPRFRDTAYFESDVVVVVC 2204
S +L + P + E D + + C
Sbjct: 75 LSTLSDPVQLEVHIGWLLLQAP---RWVFKEEDPIHLRC 110
Score = 34.1 bits (78), Expect = 0.37
Identities = 37/210 (17%), Positives = 57/210 (27%), Gaps = 33/210 (15%)
Query: 1134 APKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPI-WTVNGDEVSPDGRIKFETSENQT 1192
PK L + VL + T+ + P+ W N +S
Sbjct: 5 LPKAVVFLEPQWYRVLEKDSVTLKCQGAYSPEDQSTQWFHNESLISSQASS--------- 55
Query: 1193 IYRNKSAKRATDSGSYTIQLVNTVGSDSASCKV-YVVDKPSPPQGPLDVSDITPESCSLS 1251
Y +A DSG Y Q + SD +V P+ D C
Sbjct: 56 -YFIDAATV-DDSGEYRCQTQLSTLSDPVQLEVHIGWLLLQAPRWVFKEEDPIHLRCHS- 112
Query: 1252 WKPPLDDGGSPITNYVVEKYESATGFWSKLSSFVRSPAYDVFGLETNRQYRFRVRAENQY 1311
+ + + ++ S F A L+ + Y R ++
Sbjct: 113 ------WKNTALHKVTYLQNGKGRKYFHHNSDFYIPKA----TLKDSGSYFCRGLVGSKN 162
Query: 1312 GVSEPLELDNSITAKFPFTVP-----DPPG 1336
SE + IT V PPG
Sbjct: 163 VSSETV----QITITQGLAVSTISSFFPPG 188
Score = 33.7 bits (77), Expect = 0.50
Identities = 14/109 (12%), Positives = 32/109 (29%), Gaps = 14/109 (12%)
Query: 464 SSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKP-TISWLKGSREIT 522
S+ S+ VQ++ +++ + +C +++L+ +
Sbjct: 76 STLSDPVQLE----VHIGWLLLQAPRWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKGRK 131
Query: 523 PSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNK-GGVKSTKAELII 570
I D+ Y CR + V S ++ I
Sbjct: 132 YF--------HHNSDFYIPKATLKDSGSYFCRGLVGSKNVSSETVQITI 172
Score = 33.7 bits (77), Expect = 0.50
Identities = 14/109 (12%), Positives = 32/109 (29%), Gaps = 14/109 (12%)
Query: 2071 SSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKP-TISWLKGSREIT 2129
S+ S+ VQ++ +++ + +C +++L+ +
Sbjct: 76 STLSDPVQLE----VHIGWLLLQAPRWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKGRK 131
Query: 2130 PSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNK-GGVKSTKAELII 2177
I D+ Y CR + V S ++ I
Sbjct: 132 YF--------HHNSDFYIPKATLKDSGSYFCRGLVGSKNVSSETVQITI 172
>3tes_A Tencon; fibronectin type III domain, FN3, consensus design, de
novo; 2.50A {Synthetic}
Length = 98
Score = 70.9 bits (174), Expect = 1e-14
Identities = 21/90 (23%), Positives = 39/90 (43%), Gaps = 8/90 (8%)
Query: 671 DPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSW---IRVGNTRFTTM 727
P+ V ++ DSL L W AP + +++++ +E + V + +
Sbjct: 3 PAPKNLVVSEVTEDSLRLSWTAP----DAAFDSFMIQYQESEKVGEAINLTVPGSE-RSY 57
Query: 728 AITGLSPGHQYEFRVYAENVYGRSDPSTTS 757
+TGL PG +Y +Y RS+P +
Sbjct: 58 DLTGLKPGTEYTVSIYGVKGGHRSNPLSAE 87
Score = 62.9 bits (153), Expect = 7e-12
Identities = 19/88 (21%), Positives = 35/88 (39%), Gaps = 5/88 (5%)
Query: 279 PPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMP-HWICISTTCHDTTFI 337
P L VSE+T+ + L W P D ++++ ++ I ++ + ++
Sbjct: 3 PAPKNLVVSEVTEDSLRLSWTAP--DAA--FDSFMIQYQESEKVGEAINLTVPGSERSYD 58
Query: 338 VQGLTEGQEYLFHVMAVNENGMGPPLEG 365
+ GL G EY + V PL
Sbjct: 59 LTGLKPGTEYTVSIYGVKGGHRSNPLSA 86
Score = 62.9 bits (153), Expect = 7e-12
Identities = 19/88 (21%), Positives = 35/88 (39%), Gaps = 5/88 (5%)
Query: 1886 PPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMP-HWICISTTCHDTTFI 1944
P L VSE+T+ + L W P D ++++ ++ I ++ + ++
Sbjct: 3 PAPKNLVVSEVTEDSLRLSWTAP--DAA--FDSFMIQYQESEKVGEAINLTVPGSERSYD 58
Query: 1945 VQGLTEGQEYLFHVMAVNENGMGPPLEG 1972
+ GL G EY + V PL
Sbjct: 59 LTGLKPGTEYTVSIYGVKGGHRSNPLSA 86
Score = 61.7 bits (150), Expect = 2e-11
Identities = 21/99 (21%), Positives = 41/99 (41%), Gaps = 9/99 (9%)
Query: 1233 PPQGPLDVSDITPESCSLSWKPPLDDGGSPITNYVVEKYESATGFWSKLSSFVRSPA--Y 1290
P+ L VS++T +S LSW P + +++++ Y+ + ++ V Y
Sbjct: 4 APKN-LVVSEVTEDSLRLSWTAPD----AAFDSFMIQ-YQESEKVGEAINLTVPGSERSY 57
Query: 1291 DVFGLETNRQYRFRVRAENQYGVSEPLELDNSITAKFPF 1329
D+ GL+ +Y + S PL + + T
Sbjct: 58 DLTGLKPGTEYTVSIYGVKGGHRSNPLSAEFT-TGGHHH 95
Score = 59.4 bits (144), Expect = 1e-10
Identities = 18/93 (19%), Positives = 33/93 (35%), Gaps = 12/93 (12%)
Query: 898 VLDRPHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNS---TVWTKVSSY 954
+L P+NL E DSL L WT P + +++++ ++ + V
Sbjct: 1 MLP---APKNLVVSEVTEDSLRLSWTAPD----AAFDSFMIQYQESEKVGEAINLTVPGS 53
Query: 955 VTTPFVRVRNLAIGSTYEFRVMAENQYGLSKPA 987
+ + L G+ Y + S P
Sbjct: 54 ERS--YDLTGLKPGTEYTVSIYGVKGGHRSNPL 84
Score = 55.5 bits (134), Expect = 2e-09
Identities = 19/88 (21%), Positives = 29/88 (32%), Gaps = 4/88 (4%)
Query: 380 PPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINI 439
P VV++V D + LSW P + + I E + ++
Sbjct: 4 APKNLVVSEVTEDSLRLSWTAPD----AAFDSFMIQYQESEKVGEAINLTVPGSERSYDL 59
Query: 440 PNLIEGRQYEFRVYAQNEAGLSLPSSAS 467
L G +Y +Y S P SA
Sbjct: 60 TGLKPGTEYTVSIYGVKGGHRSNPLSAE 87
Score = 55.5 bits (134), Expect = 2e-09
Identities = 19/88 (21%), Positives = 29/88 (32%), Gaps = 4/88 (4%)
Query: 1987 PPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINI 2046
P VV++V D + LSW P + + I E + ++
Sbjct: 4 APKNLVVSEVTEDSLRLSWTAPD----AAFDSFMIQYQESEKVGEAINLTVPGSERSYDL 59
Query: 2047 PNLIEGRQYEFRVYAQNEAGLSLPSSAS 2074
L G +Y +Y S P SA
Sbjct: 60 TGLKPGTEYTVSIYGVKGGHRSNPLSAE 87
Score = 39.7 bits (93), Expect = 7e-04
Identities = 18/120 (15%), Positives = 32/120 (26%), Gaps = 36/120 (30%)
Query: 1004 APGAPKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKY 1063
AP + TEDS+ L W+ P + ++++ + +P + Y
Sbjct: 4 APKNLVVSEVTEDSLRLSWTAPD----AAFDSFMIQYQESEKVGEAINLT--VPGSERSY 57
Query: 1064 VLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPWSSSS 1123
L T L EY + V + S+
Sbjct: 58 DL------------------------------TGLKPGTEYTVSIYGVKGGHRSNPLSAE 87
Score = 36.7 bits (85), Expect = 0.009
Identities = 11/53 (20%), Positives = 19/53 (35%)
Query: 22 YIIERREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPS 74
++I+ +E E S+ + L G +Y I V +S P
Sbjct: 32 FMIQYQESEKVGEAINLTVPGSERSYDLTGLKPGTEYTVSIYGVKGGHRSNPL 84
Score = 35.5 bits (82), Expect = 0.028
Identities = 19/123 (15%), Positives = 35/123 (28%), Gaps = 49/123 (39%)
Query: 1559 VDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEG 1618
+ TEDS+ L W+ P + ++++ +
Sbjct: 11 SEVTEDSLRLSWTAPD----AAFDSFMIQYQ----------------------------- 37
Query: 1619 KSIGSERGSTAQFLEREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKS 1678
E + + V G+ E S+ + L G +Y I V +S
Sbjct: 38 -----ESEKVGEAINLTVPGS-----------ERSYDLTGLKPGTEYTVSIYGVKGGHRS 81
Query: 1679 EPS 1681
P
Sbjct: 82 NPL 84
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation,
kinase domain ubiquitin-like domain, kinase, substrate
binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Length = 676
Score = 79.0 bits (194), Expect = 1e-14
Identities = 23/89 (25%), Positives = 41/89 (46%), Gaps = 7/89 (7%)
Query: 816 SSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLE-KELIRKEIDIMNQL 874
+ +++ E +GTG FG V R + TG A K + + +E EI IM +L
Sbjct: 10 TQTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKL 69
Query: 875 HHPKLINLHDAFED------DDEMVLIFE 897
+HP +++ + + +D +L E
Sbjct: 70 NHPNVVSAREVPDGLQKLAPNDLPLLAME 98
>2cry_A KIN of IRRE-like protein 3; IG fold, KIN of irregular chiasm-like
protein 3, nephrin- like 2, structural genomics, NPPSFA;
NMR {Homo sapiens} SCOP: b.1.1.1
Length = 122
Score = 71.1 bits (174), Expect = 1e-14
Identities = 33/124 (26%), Positives = 46/124 (37%), Gaps = 14/124 (11%)
Query: 560 GVKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKP-KITWYRDNEVIE 618
G + L + P + T + GE +K P P +I W V+E
Sbjct: 1 GSSGSSGTLTVNGPPIISSTQ----TQHALHGEKGQIKCFIRSTPPPDRIAWSWKENVLE 56
Query: 619 SG--GHFHVETSERH----AILTIRDASNVDTA-PYRVVAENDLGMDSAIV--KIQISDR 669
SG G + VET + LTI + D Y A N G D+ I+ K Q S+
Sbjct: 57 SGTSGRYTVETISTEEGVISTLTISNIVRADFQTIYNCTAWNSFGSDTEIIRLKEQGSEM 116
Query: 670 PDPP 673
P
Sbjct: 117 SGPS 120
Score = 67.2 bits (164), Expect = 4e-13
Identities = 23/104 (22%), Positives = 34/104 (32%), Gaps = 8/104 (7%)
Query: 479 KAPEIIVPLRNANAIQNHNAQFQCTITGCPKP-TISWLKGSREITPSARHHI------FA 531
P II + +A+ Q +C I P P I+W +
Sbjct: 12 NGPPIISSTQTQHALHGEKGQIKCFIRSTPPPDRIAWSWKENVLESGTSGRYTVETISTE 71
Query: 532 EGDTYTLIINSVYGVD-ADEYVCRAVNKGGVKSTKAELIIMTAP 574
EG TL I+++ D Y C A N G + L +
Sbjct: 72 EGVISTLTISNIVRADFQTIYNCTAWNSFGSDTEIIRLKEQGSE 115
Score = 67.2 bits (164), Expect = 4e-13
Identities = 23/104 (22%), Positives = 34/104 (32%), Gaps = 8/104 (7%)
Query: 2086 KAPEIIVPLRNANAIQNHNAQFQCTITGCPKP-TISWLKGSREITPSARHHI------FA 2138
P II + +A+ Q +C I P P I+W +
Sbjct: 12 NGPPIISSTQTQHALHGEKGQIKCFIRSTPPPDRIAWSWKENVLESGTSGRYTVETISTE 71
Query: 2139 EGDTYTLIINSVYGVD-ADEYVCRAVNKGGVKSTKAELIIMTAP 2181
EG TL I+++ D Y C A N G + L +
Sbjct: 72 EGVISTLTISNIVRADFQTIYNCTAWNSFGSDTEIIRLKEQGSE 115
Score = 67.2 bits (164), Expect = 4e-13
Identities = 26/102 (25%), Positives = 36/102 (35%), Gaps = 8/102 (7%)
Query: 91 PDFIVPLKDLVVPLGKLLTLQCEATGTPVPKC-RWLRNGREISSGA--RYRVET----AG 143
P I + G+ ++C TP P W + SG RY VET G
Sbjct: 14 PPIISSTQTQHALHGEKGQIKCFIRSTPPPDRIAWSWKENVLESGTSGRYTVETISTEEG 73
Query: 144 GVFRLHFNEVTDVDNGD-YTCEAYNSVGFAHTSSRVKIGTPP 184
+ L + + D Y C A+NS G R+K
Sbjct: 74 VISTLTISNIVRADFQTIYNCTAWNSFGSDTEIIRLKEQGSE 115
Score = 67.2 bits (164), Expect = 4e-13
Identities = 26/102 (25%), Positives = 36/102 (35%), Gaps = 8/102 (7%)
Query: 1698 PDFIVPLKDLVVPLGKLLTLQCEATGTPVPKC-RWLRNGREISSGA--RYRVET----AG 1750
P I + G+ ++C TP P W + SG RY VET G
Sbjct: 14 PPIISSTQTQHALHGEKGQIKCFIRSTPPPDRIAWSWKENVLESGTSGRYTVETISTEEG 73
Query: 1751 GVFRLHFNEVTDVDNGD-YTCEAYNSVGFAHTSSRVKIGTPP 1791
+ L + + D Y C A+NS G R+K
Sbjct: 74 VISTLTISNIVRADFQTIYNCTAWNSFGSDTEIIRLKEQGSE 115
Score = 54.1 bits (130), Expect = 1e-08
Identities = 25/123 (20%), Positives = 45/123 (36%), Gaps = 11/123 (8%)
Query: 170 GFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGD-QPMEVSLTKNGRVVQSDD 228
G + +S + + PP I + G+ ++K F P ++ + V++S
Sbjct: 1 GSSGSSGTLTVNGPPII-SSTQTQHALHGEKGQIKCFIRSTPPPDRIAWSWKENVLESGT 59
Query: 229 RFKFTVLDDYI------IIFIKEIRKEDAGD-YTVNLSNSSGSVSGTFTINITG--LPGP 279
++TV + I I + D Y NS GS + + G + GP
Sbjct: 60 SGRYTVETISTEEGVISTLTISNIVRADFQTIYNCTAWNSFGSDTEIIRLKEQGSEMSGP 119
Query: 280 PIG 282
G
Sbjct: 120 SSG 122
Score = 54.1 bits (130), Expect = 1e-08
Identities = 25/123 (20%), Positives = 45/123 (36%), Gaps = 11/123 (8%)
Query: 1777 GFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGD-QPMEVSLTKNGRVVQSDD 1835
G + +S + + PP I + G+ ++K F P ++ + V++S
Sbjct: 1 GSSGSSGTLTVNGPPII-SSTQTQHALHGEKGQIKCFIRSTPPPDRIAWSWKENVLESGT 59
Query: 1836 RFKFTVLDDYI------IIFIKEIRKEDAGD-YTVNLSNSSGSVSGTFTINITG--LPGP 1886
++TV + I I + D Y NS GS + + G + GP
Sbjct: 60 SGRYTVETISTEEGVISTLTISNIVRADFQTIYNCTAWNSFGSDTEIIRLKEQGSEMSGP 119
Query: 1887 PIG 1889
G
Sbjct: 120 SSG 122
Score = 53.4 bits (128), Expect = 3e-08
Identities = 22/112 (19%), Positives = 35/112 (31%), Gaps = 12/112 (10%)
Query: 1134 APKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPI-WTVNGDEVSPDGRIKFETSENQT 1192
P I+S + L GE+ I P P I W+ + + ++ T
Sbjct: 14 PPIISS---TQTQHALHGEKGQIKCFIRSTPPPDRIAWSWKENVLESGTSGRYTVETIST 70
Query: 1193 IYRNKS------AKRATDSGSYTIQLVNTVGSDSASCKVYV--VDKPSPPQG 1236
S RA Y N+ GSD+ ++ + P G
Sbjct: 71 EEGVISTLTISNIVRADFQTIYNCTAWNSFGSDTEIIRLKEQGSEMSGPSSG 122
Score = 39.9 bits (93), Expect = 0.001
Identities = 15/88 (17%), Positives = 28/88 (31%), Gaps = 7/88 (7%)
Query: 1430 RDITVKAGEDFSIHVPFMAFPQPAA-FWFANDSIIDDSDT-----RVHKQLTMNSASLVV 1483
+ GE I + P P W +++++ + ++L +
Sbjct: 21 QTQHALHGEKGQIKCFIRSTPPPDRIAWSWKENVLESGTSGRYTVETISTEEGVISTLTI 80
Query: 1484 KNSQRSD-GGQYRLQLKNPAGFDTATLH 1510
N R+D Y N G DT +
Sbjct: 81 SNIVRADFQTIYNCTAWNSFGSDTEIIR 108
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors,
virtual screening, X-RAY CO- crystal analysis,
structure-based drug design (SBDD); HET: MMH; 1.90A
{Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A*
2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A*
3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A*
3lau_A* 2wtv_A* ...
Length = 279
Score = 75.3 bits (186), Expect = 2e-14
Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 5/82 (6%)
Query: 820 DHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIP----VSHNLEKELIRKEIDIMNQLH 875
+ ++I +G G FG V+ RE+++ I A K + +E +L R E++I + L
Sbjct: 9 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR-EVEIQSHLR 67
Query: 876 HPKLINLHDAFEDDDEMVLIFE 897
HP ++ L+ F D + LI E
Sbjct: 68 HPNILRLYGYFHDATRVYLILE 89
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation,
protein-protein interaction, PR kinase, cell cycle,
transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP:
d.144.1.7
Length = 346
Score = 76.5 bits (189), Expect = 2e-14
Identities = 28/96 (29%), Positives = 49/96 (51%), Gaps = 7/96 (7%)
Query: 811 VDIKTSSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKEL------I 864
+ + S Y+ L+ +G G F V++ R++ T I A K I + H E + +
Sbjct: 1 MALDVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTAL 60
Query: 865 RKEIDIMNQLHHPKLINLHDAFEDDDEMVLIFEVLD 900
R EI ++ +L HP +I L DAF + L+F+ ++
Sbjct: 61 R-EIKLLQELSHPNIIGLLDAFGHKSNISLVFDFME 95
>1j8k_A Fibronectin; EDA, TYPEIII domain, protein binding; NMR {Homo
sapiens} SCOP: b.1.2.1
Length = 94
Score = 69.7 bits (171), Expect = 2e-14
Identities = 20/94 (21%), Positives = 34/94 (36%), Gaps = 8/94 (8%)
Query: 671 DPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREH--PMSSWIRVGNTRFTTMA 728
D P+ D+ DS+ + W +P ++ Y V + + T
Sbjct: 3 DRPKGLAFTDVDVDSIKIAWESP----QGQVSRYRVTYSSPEDGIHELFPAPDGEEDTAE 58
Query: 729 ITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITT 762
+ GL PG +Y V A + S P + +T
Sbjct: 59 LQGLRPGSEYTVSVVALHDDMESQPLIGT--QST 90
Score = 63.2 bits (154), Expect = 4e-12
Identities = 19/83 (22%), Positives = 35/83 (42%), Gaps = 5/83 (6%)
Query: 284 LDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDIS-MPHWICISTTCHDTTFIVQGLT 342
L +++ + + W P+ V+ Y V H + + + T +QGL
Sbjct: 8 LAFTDVDVDSIKIAWESPQGQ----VSRYRVTYSSPEDGIHELFPAPDGEEDTAELQGLR 63
Query: 343 EGQEYLFHVMAVNENGMGPPLEG 365
G EY V+A++++ PL G
Sbjct: 64 PGSEYTVSVVALHDDMESQPLIG 86
Score = 63.2 bits (154), Expect = 4e-12
Identities = 19/83 (22%), Positives = 35/83 (42%), Gaps = 5/83 (6%)
Query: 1891 LDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDIS-MPHWICISTTCHDTTFIVQGLT 1949
L +++ + + W P+ V+ Y V H + + + T +QGL
Sbjct: 8 LAFTDVDVDSIKIAWESPQGQ----VSRYRVTYSSPEDGIHELFPAPDGEEDTAELQGLR 63
Query: 1950 EGQEYLFHVMAVNENGMGPPLEG 1972
G EY V+A++++ PL G
Sbjct: 64 PGSEYTVSVVALHDDMESQPLIG 86
Score = 61.7 bits (150), Expect = 1e-11
Identities = 18/88 (20%), Positives = 33/88 (37%), Gaps = 6/88 (6%)
Query: 1232 SPPQGPLDVSDITPESCSLSWKPPLDDGGSPITNYVVEKYESATGFWSKLSSF-VRSPAY 1290
P+G L +D+ +S ++W+ P ++ Y V G +
Sbjct: 3 DRPKG-LAFTDVDVDSIKIAWESP----QGQVSRYRVTYSSPEDGIHELFPAPDGEEDTA 57
Query: 1291 DVFGLETNRQYRFRVRAENQYGVSEPLE 1318
++ GL +Y V A + S+PL
Sbjct: 58 ELQGLRPGSEYTVSVVALHDDMESQPLI 85
Score = 59.3 bits (144), Expect = 9e-11
Identities = 16/85 (18%), Positives = 30/85 (35%), Gaps = 5/85 (5%)
Query: 904 PPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTK-VSSYVTTPFVRV 962
P+ L + DS+ + W P+ ++ Y V + + +
Sbjct: 4 RPKGLAFTDVDVDSIKIAWESPQGQ----VSRYRVTYSSPEDGIHELFPAPDGEEDTAEL 59
Query: 963 RNLAIGSTYEFRVMAENQYGLSKPA 987
+ L GS Y V+A + S+P
Sbjct: 60 QGLRPGSEYTVSVVALHDDMESQPL 84
Score = 59.0 bits (143), Expect = 1e-10
Identities = 16/94 (17%), Positives = 31/94 (32%), Gaps = 5/94 (5%)
Query: 376 DKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPS 435
+ P G+ T V D + ++W+ P ++ Y + +
Sbjct: 1 NIDRPKGL-AFTDVDVDSIKIAWESP----QGQVSRYRVTYSSPEDGIHELFPAPDGEED 55
Query: 436 QINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNS 469
+ L G +Y V A ++ S P + S
Sbjct: 56 TAELQGLRPGSEYTVSVVALHDDMESQPLIGTQS 89
Score = 59.0 bits (143), Expect = 1e-10
Identities = 16/94 (17%), Positives = 31/94 (32%), Gaps = 5/94 (5%)
Query: 1983 DKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPS 2042
+ P G+ T V D + ++W+ P ++ Y + +
Sbjct: 1 NIDRPKGL-AFTDVDVDSIKIAWESP----QGQVSRYRVTYSSPEDGIHELFPAPDGEED 55
Query: 2043 QINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNS 2076
+ L G +Y V A ++ S P + S
Sbjct: 56 TAELQGLRPGSEYTVSVVALHDDMESQPLIGTQS 89
Score = 42.8 bits (101), Expect = 6e-05
Identities = 11/57 (19%), Positives = 23/57 (40%)
Query: 22 YIIERREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPSICTT 78
Y + I + E + + L G++Y ++A++ +S+P I T
Sbjct: 32 YRVTYSSPEDGIHELFPAPDGEEDTAELQGLRPGSEYTVSVVALHDDMESQPLIGTQ 88
Score = 42.4 bits (100), Expect = 8e-05
Identities = 16/124 (12%), Positives = 28/124 (22%), Gaps = 37/124 (29%)
Query: 1000 DVPGAPGAPKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDT 1059
++ P D DSI + W P+ + RY V D +
Sbjct: 1 NID-RPKGLAFTDVDVDSIKIAWESPQ----GQVSRYRVTYSSPEDGIHELFPAPDGEED 55
Query: 1060 SLKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPW 1119
+ + L EY V A++ +
Sbjct: 56 TA--------------------------------ELQGLRPGSEYTVSVVALHDDMESQP 83
Query: 1120 SSSS 1123
+
Sbjct: 84 LIGT 87
Score = 38.9 bits (91), Expect = 0.002
Identities = 18/127 (14%), Positives = 32/127 (25%), Gaps = 49/127 (38%)
Query: 1559 VDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEG 1618
D DSI + W P+ + RY V D + +
Sbjct: 11 TDVDVDSIKIAWESPQ----GQVSRYRVTYSSPEDGIHELFPAPDGEEDT---------- 56
Query: 1619 KSIGSERGSTAQFLEREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKS 1678
+ L G++Y ++A++ +S
Sbjct: 57 -----------------------------------AELQGLRPGSEYTVSVVALHDDMES 81
Query: 1679 EPSICTT 1685
+P I T
Sbjct: 82 QPLIGTQ 88
Score = 28.5 bits (64), Expect = 7.3
Identities = 8/60 (13%), Positives = 21/60 (35%), Gaps = 4/60 (6%)
Query: 1333 DPPGQPQIVDWDTNNATLMWDRPRTDGGSKIQGYKMLLKTPTGELPTTIWSKIRPTSSTV 1392
D P D D ++ + W+ P+ ++ Y++ +P + + +
Sbjct: 3 DRPKGLAFTDVDVDSIKIAWESPQ----GQVSRYRVTYSSPEDGIHELFPAPDGEEDTAE 58
>2cuh_A Tenascin-X; fibronectin type III domain, extracellular matrix,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
b.1.2.1
Length = 115
Score = 70.2 bits (172), Expect = 2e-14
Identities = 14/97 (14%), Positives = 26/97 (26%), Gaps = 6/97 (6%)
Query: 666 ISDRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSWIRVGNTRFT 725
S PD P ++ L W+ P + + Y ++
Sbjct: 4 GSSGPDGPTQLRALNLTEGFAVLHWKPPQ----NPVDTYDIQVTAPGAPPLQAETPGSAV 59
Query: 726 TMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITT 762
+ L Y V + P++ + TT
Sbjct: 60 DYPLHDLVLHTNYTATVRGLRGPNLTSPASIT--FTT 94
Score = 68.2 bits (167), Expect = 1e-13
Identities = 20/120 (16%), Positives = 40/120 (33%), Gaps = 13/120 (10%)
Query: 1230 KPSPPQGPLDVSDITPESCSLSWKPPLDDGGSPITNYVVEKYESATGFWSKLSSFVRSPA 1289
P P L ++T L WKPP +P+ Y ++ + + + +
Sbjct: 7 GPDGPTQ-LRALNLTEGFAVLHWKPPQ----NPVDTYDIQ-VTAPGAPPLQAETPGSAVD 60
Query: 1290 YDVFGLETNRQYRFRVRAENQYGVSEPLELDNSITAKFPFTVPDPPGQPQIVDWDTNNAT 1349
Y + L + Y VR ++ P + F T + P + + + +
Sbjct: 61 YPLHDLVLHTNYTATVRGLRGPNLTSP------ASITFT-TGLEAPRDLEAKEVTPSGPS 113
Score = 60.9 bits (148), Expect = 4e-11
Identities = 15/89 (16%), Positives = 29/89 (32%), Gaps = 5/89 (5%)
Query: 901 RPHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTKVSSYVTTPFV 960
P P L A L+W PP+ + + Y ++ + + +
Sbjct: 7 GPDGPTQLRALNLTEGFAVLHWKPPQ----NPVDTYDIQVTAPGAPPLQAETPGSAVDYP 62
Query: 961 RVRNLAIGSTYEFRVMAENQYGLSKPALT 989
+ +L + + Y V L+ PA
Sbjct: 63 -LHDLVLHTNYTATVRGLRGPNLTSPASI 90
Score = 58.2 bits (141), Expect = 5e-10
Identities = 22/118 (18%), Positives = 34/118 (28%), Gaps = 10/118 (8%)
Query: 273 ITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCH 332
+ P P L +T+ LHW PP+ V Y ++ P T
Sbjct: 4 GSSGPDGPTQ-LRALNLTEGFAVLHWKPPQ----NPVDTYDIQVTAPGAPPLQ-AETPGS 57
Query: 333 DTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVG 390
+ + L Y V + + P I + + P VT G
Sbjct: 58 AVDYPLHDLVLHTNYTATVRGLRGPNLTSPA----SITFTTGLEAPRDLEAKEVTPSG 111
Score = 58.2 bits (141), Expect = 5e-10
Identities = 22/118 (18%), Positives = 34/118 (28%), Gaps = 10/118 (8%)
Query: 1880 ITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCH 1939
+ P P L +T+ LHW PP+ V Y ++ P T
Sbjct: 4 GSSGPDGPTQ-LRALNLTEGFAVLHWKPPQ----NPVDTYDIQVTAPGAPPLQ-AETPGS 57
Query: 1940 DTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVG 1997
+ + L Y V + + P I + + P VT G
Sbjct: 58 AVDYPLHDLVLHTNYTATVRGLRGPNLTSPA----SITFTTGLEAPRDLEAKEVTPSG 111
Score = 53.6 bits (129), Expect = 2e-08
Identities = 16/91 (17%), Positives = 27/91 (29%), Gaps = 6/91 (6%)
Query: 377 KPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQ 436
P P + F L W P + + Y I G+ Q +
Sbjct: 7 GPDGPTQLRALNLTEGFAVLHWKPPQ----NPVDTYDIQVTAPGAPPLQAETPG--SAVD 60
Query: 437 INIPNLIEGRQYEFRVYAQNEAGLSLPSSAS 467
+ +L+ Y V L+ P+S +
Sbjct: 61 YPLHDLVLHTNYTATVRGLRGPNLTSPASIT 91
Score = 53.6 bits (129), Expect = 2e-08
Identities = 16/91 (17%), Positives = 27/91 (29%), Gaps = 6/91 (6%)
Query: 1984 KPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQ 2043
P P + F L W P + + Y I G+ Q +
Sbjct: 7 GPDGPTQLRALNLTEGFAVLHWKPPQ----NPVDTYDIQVTAPGAPPLQAETPG--SAVD 60
Query: 2044 INIPNLIEGRQYEFRVYAQNEAGLSLPSSAS 2074
+ +L+ Y V L+ P+S +
Sbjct: 61 YPLHDLVLHTNYTATVRGLRGPNLTSPASIT 91
Score = 39.0 bits (91), Expect = 0.002
Identities = 17/123 (13%), Positives = 33/123 (26%), Gaps = 38/123 (30%)
Query: 1001 VPGAPGAPKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTS 1060
P P + ++ TE L W P+ +P+ Y ++ A P ++
Sbjct: 7 GPDGPTQLRALNLTEGFAVLHWKPPQ----NPVDTYDIQVTAPGAPPLQ----AETPGSA 58
Query: 1061 LKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPWS 1120
+ Y L L+ + Y V + +
Sbjct: 59 VDYPL------------------------------HDLVLHTNYTATVRGLRGPNLTSPA 88
Query: 1121 SSS 1123
S +
Sbjct: 89 SIT 91
Score = 35.1 bits (81), Expect = 0.057
Identities = 8/55 (14%), Positives = 18/55 (32%), Gaps = 2/55 (3%)
Query: 20 DCYIIERREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPS 74
D Y I+ G + ++ +LV +Y + + + P+
Sbjct: 36 DTYDIQVTAPGAPPLQAETPGSAVDYPLH--DLVLHTNYTATVRGLRGPNLTSPA 88
Score = 31.3 bits (71), Expect = 1.0
Identities = 4/29 (13%), Positives = 12/29 (41%)
Query: 1653 SFSVLNLVEGNDYEFRIIAVNAIGKSEPS 1681
+ + +LV +Y + + + P+
Sbjct: 60 DYPLHDLVLHTNYTATVRGLRGPNLTSPA 88
Score = 30.9 bits (70), Expect = 1.6
Identities = 10/52 (19%), Positives = 19/52 (36%), Gaps = 4/52 (7%)
Query: 1330 TVPDPPGQPQIVDWDTNNATLMWDRPRTDGGSKIQGYKMLLKTPTGELPTTI 1381
+ PD P Q + ++ A L W P+ + + Y + + P
Sbjct: 6 SGPDGPTQLRALNLTEGFAVLHWKPPQ----NPVDTYDIQVTAPGAPPLQAE 53
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural
plasticity, cell-surface dimerizatio adhesion; HET: NAG
FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4
PDB: 1p53_A*
Length = 265
Score = 74.3 bits (182), Expect = 3e-14
Identities = 41/242 (16%), Positives = 68/242 (28%), Gaps = 40/242 (16%)
Query: 38 NDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPSICTTPVKICEFVGGEKPDFIVPL 97
ND + S SV EG + E V I F P V L
Sbjct: 55 NDSFSAKASVSVTAEDEG-TQRLTCAVILGNQSQETLQ---TVTIYSF-----PAPNVIL 105
Query: 98 KDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVD 157
V G +T++CEA + + G +L + +
Sbjct: 106 TKPEVSEGTEVTVKCEAHPRAKVTLNGVP------------AQPLGPRAQLLLKATPEDN 153
Query: 158 NGDYTCEAYNSVGFAHTSSR----VKIGTPPRIDR--MPNALYIPEGDNTKVKIFYAGDQ 211
++C A V +++ PR+D P PE G+
Sbjct: 154 GRSFSCSATLEVAGQLIHKNQTRELRVLYGPRLDERDCPGNWTWPENSQQTPMCQAWGNP 213
Query: 212 PMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTI 271
E+ K+G + ++ G Y ++ G V+ T+
Sbjct: 214 LPELKCLKDGTFPLPIGE-------------SVTVTRDLEGTYLCRARSTQGEVTREVTV 260
Query: 272 NI 273
N+
Sbjct: 261 NV 262
Score = 74.3 bits (182), Expect = 3e-14
Identities = 41/242 (16%), Positives = 68/242 (28%), Gaps = 40/242 (16%)
Query: 1645 NDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPSICTTPVKICEFVGGEKPDFIVPL 1704
ND + S SV EG + E V I F P V L
Sbjct: 55 NDSFSAKASVSVTAEDEG-TQRLTCAVILGNQSQETLQ---TVTIYSF-----PAPNVIL 105
Query: 1705 KDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVD 1764
V G +T++CEA + + G +L + +
Sbjct: 106 TKPEVSEGTEVTVKCEAHPRAKVTLNGVP------------AQPLGPRAQLLLKATPEDN 153
Query: 1765 NGDYTCEAYNSVGFAHTSSR----VKIGTPPRIDR--MPNALYIPEGDNTKVKIFYAGDQ 1818
++C A V +++ PR+D P PE G+
Sbjct: 154 GRSFSCSATLEVAGQLIHKNQTRELRVLYGPRLDERDCPGNWTWPENSQQTPMCQAWGNP 213
Query: 1819 PMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTI 1878
E+ K+G + ++ G Y ++ G V+ T+
Sbjct: 214 LPELKCLKDGTFPLPIGE-------------SVTVTRDLEGTYLCRARSTQGEVTREVTV 260
Query: 1879 NI 1880
N+
Sbjct: 261 NV 262
Score = 73.2 bits (179), Expect = 6e-14
Identities = 32/299 (10%), Positives = 75/299 (25%), Gaps = 50/299 (16%)
Query: 378 PSPPGI--PVVTQVGGDFVNL----SWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAI 431
+PP + P V +V + P+ + +++ D+ + + + +
Sbjct: 4 ATPPQLVSPRVLEVDTQ-GTVVCSLDGLFPVSE--AQVHLALGDQRLNPTVTYGNDSFSA 60
Query: 432 CAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNAN 491
+ +V I P V L
Sbjct: 61 ---KASVSVTAEDEGTQRLTCAVILGNQ---SQETLQTVTIYSF-----PAPNVILTKPE 109
Query: 492 AIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEY 551
+ +C K T++ + G L++ + + +
Sbjct: 110 VSEGTEVTVKCEAHPRAKVTLNGVPAQ------------PLGPRAQLLLKATPEDNGRSF 157
Query: 552 VCRAVN----KGGVKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPK 607
C A + K+ EL ++ P+ + + + + G P P+
Sbjct: 158 SCSATLEVAGQLIHKNQTRELRVLYGPRLDERDCPGNWTW-PENSQQTPMCQAWGNPLPE 216
Query: 608 ITWYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQI 666
+ +D G + Y A + G + V + +
Sbjct: 217 LKCLKDGTFPLPIGE-------------SVTVTRDLEGTYLCRARSTQGEVTREVTVNV 262
Score = 58.9 bits (142), Expect = 4e-09
Identities = 19/97 (19%), Positives = 31/97 (31%), Gaps = 17/97 (17%)
Query: 90 KPDFIVPLK--DLVVPLGKLLTLQCEATGTPVPKCRWLRNG-REISSGARYRVETAGGVF 146
P + P T C+A G P+P+ + L++G + G V
Sbjct: 183 GPRLDERDCPGNWTWPENSQQTPMCQAWGNPLPELKCLKDGTFPLPIGESVTVTRD---- 238
Query: 147 RLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTP 183
G Y C A ++ G V + +P
Sbjct: 239 ----------LEGTYLCRARSTQGEVTREVTVNVLSP 265
Score = 58.9 bits (142), Expect = 4e-09
Identities = 19/97 (19%), Positives = 31/97 (31%), Gaps = 17/97 (17%)
Query: 1697 KPDFIVPLK--DLVVPLGKLLTLQCEATGTPVPKCRWLRNG-REISSGARYRVETAGGVF 1753
P + P T C+A G P+P+ + L++G + G V
Sbjct: 183 GPRLDERDCPGNWTWPENSQQTPMCQAWGNPLPELKCLKDGTFPLPIGESVTVTRD---- 238
Query: 1754 RLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTP 1790
G Y C A ++ G V + +P
Sbjct: 239 ----------LEGTYLCRARSTQGEVTREVTVNVLSP 265
Score = 53.1 bits (127), Expect = 4e-07
Identities = 27/218 (12%), Positives = 60/218 (27%), Gaps = 29/218 (13%)
Query: 91 PDFIVPLKDLVVPLGKLLTLQCEATG---TPVPKCRWLRNGREISSGARYRVETAGGVFR 147
P + P V+ + T+ C G + + ++ Y ++
Sbjct: 7 PQLVSPR---VLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRLNPTVTYGNDSFSAKAS 63
Query: 148 LHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFY 207
+ D TC T V I + P + + + EG
Sbjct: 64 VSVT-AEDEGTQRLTCAVILGNQSQETLQTVTIYSFPAPNVILTKPEVSEGTE------- 115
Query: 208 AGDQPMEVSLT--KNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYT--VNLSNSSG 263
V++ + R + + L + +K +++ ++ L +
Sbjct: 116 -------VTVKCEAHPRAKVTLNGVPAQPLGPRAQLLLKATPEDNGRSFSCSATLEVAGQ 168
Query: 264 SVSGTFTINITGLPGPPI----GPLDVSEITKHTCTLH 297
+ T + L GP + P + + T
Sbjct: 169 LIHKNQTRELRVLYGPRLDERDCPGNWTWPENSQQTPM 206
Score = 53.1 bits (127), Expect = 4e-07
Identities = 27/218 (12%), Positives = 60/218 (27%), Gaps = 29/218 (13%)
Query: 1698 PDFIVPLKDLVVPLGKLLTLQCEATG---TPVPKCRWLRNGREISSGARYRVETAGGVFR 1754
P + P V+ + T+ C G + + ++ Y ++
Sbjct: 7 PQLVSPR---VLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRLNPTVTYGNDSFSAKAS 63
Query: 1755 LHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFY 1814
+ D TC T V I + P + + + EG
Sbjct: 64 VSVT-AEDEGTQRLTCAVILGNQSQETLQTVTIYSFPAPNVILTKPEVSEGTE------- 115
Query: 1815 AGDQPMEVSLT--KNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYT--VNLSNSSG 1870
V++ + R + + L + +K +++ ++ L +
Sbjct: 116 -------VTVKCEAHPRAKVTLNGVPAQPLGPRAQLLLKATPEDNGRSFSCSATLEVAGQ 168
Query: 1871 SVSGTFTINITGLPGPPI----GPLDVSEITKHTCTLH 1904
+ T + L GP + P + + T
Sbjct: 169 LIHKNQTRELRVLYGPRLDERDCPGNWTWPENSQQTPM 206
Score = 52.8 bits (126), Expect = 4e-07
Identities = 16/94 (17%), Positives = 26/94 (27%), Gaps = 14/94 (14%)
Query: 1134 APKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQTI 1193
P++ + T + T G P P +G P G T +
Sbjct: 183 GPRLDERDCPGNWTWPENSQQTPMCQAWGNPLPELKCLKDGTFPLPIGESVTVTRD---- 238
Query: 1194 YRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYV 1227
G+Y + +T G + V V
Sbjct: 239 ----------LEGTYLCRARSTQGEVTREVTVNV 262
Score = 50.8 bits (121), Expect = 2e-06
Identities = 25/231 (10%), Positives = 61/231 (26%), Gaps = 36/231 (15%)
Query: 1985 PSPPGI--PVVTQVGGDFVNL----SWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAI 2038
+PP + P V +V + P+ + +++ D+ + + + +
Sbjct: 4 ATPPQLVSPRVLEVDTQ-GTVVCSLDGLFPVSE--AQVHLALGDQRLNPTVTYGNDSFSA 60
Query: 2039 CAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNAN 2098
+ +V I P V L
Sbjct: 61 ---KASVSVTAEDEGTQRLTCAVILGNQ---SQETLQTVTIYSF-----PAPNVILTKPE 109
Query: 2099 AIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEY 2158
+ +C K T++ + G L++ + + +
Sbjct: 110 VSEGTEVTVKCEAHPRAKVTLNGVPAQ------------PLGPRAQLLLKATPEDNGRSF 157
Query: 2159 VCRAVN----KGGVKSTKAELIIMTAPKFNVPPRFRDTAYFESDVVVVVCV 2205
C A + K+ EL ++ P+ + + + E+ +C
Sbjct: 158 SCSATLEVAGQLIHKNQTRELRVLYGPRLDERDCPGNWTWPENSQQTPMCQ 208
Score = 50.1 bits (119), Expect = 3e-06
Identities = 23/140 (16%), Positives = 42/140 (30%), Gaps = 21/140 (15%)
Query: 2041 PSQINIPNLIEGRQYEFRVYAQNE-AGLSLPSSASNSVQIKDPMAAKAPEIIVPL--RNA 2097
+Q+ + E F A E AG + + + +++ P + N
Sbjct: 141 RAQLLLKATPEDNGRSFSCSATLEVAGQLIHKNQTRELRVLYG-----PRLDERDCPGNW 195
Query: 2098 NAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADE 2157
+N C G P P + LK P +V
Sbjct: 196 TWPENSQQTPMCQAWGNPLPELKCLKDGTFPLPIGE-------------SVTVTRDLEGT 242
Query: 2158 YVCRAVNKGGVKSTKAELII 2177
Y+CRA + G + + + +
Sbjct: 243 YLCRARSTQGEVTREVTVNV 262
Score = 32.3 bits (73), Expect = 1.8
Identities = 36/290 (12%), Positives = 74/290 (25%), Gaps = 44/290 (15%)
Query: 1231 PSPPQ----GPLDVSDITPESCSLSWKPPLDDGGSPITNYVVEKYESATGFWSKLSSFVR 1286
+PPQ L+V CSL P+ + + + + ++ + T + S +
Sbjct: 4 ATPPQLVSPRVLEVDTQGTVVCSLDGLFPVSE--AQVHLALGDQRLNPTVTYGNDSFSAK 61
Query: 1287 SPAYDVFGLETNRQYRFRVRAENQYGVSEPLELDNSITAKFPFTVPDPP----GQPQIVD 1342
+ E ++ E L+ + P + P G V
Sbjct: 62 ASVSVTAEDEGTQRLT--CAVILGNQSQETLQTVTIYSFPAPNVILTKPEVSEGTEVTVK 119
Query: 1343 WDTN-NATLMWDRPRTDGGSKIQGYKMLLKTPTGELPTTIWSKIRPTSSTVY-CKDTTMN 1400
+ + A + + G Q P G + + + C T
Sbjct: 120 CEAHPRAKVTLN------GVPAQ--------PLGPRAQLLLKATPEDNGRSFSCSATLEV 165
Query: 1401 SSNSEPGKQSGPVIVEEQPNKPVMDLSGVRDITVKAGEDFSIHVPFMAFPQPAAFWFAND 1460
+ Q+ + V P + + + T + P P +
Sbjct: 166 AGQLIHKNQTRELRVLYGP--RLDERDCPGNWTWPENSQQTPMCQAWGNPLPELKCLKDG 223
Query: 1461 SIIDDSDTRVHKQLTMNSASLVVKNSQRSDGGQYRLQLKNPAGFDTATLH 1510
+ R G Y + ++ G T +
Sbjct: 224 TFPLPIGES--------------VTVTRDLEGTYLCRARSTQGEVTREVT 259
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding,
serine/threonine-protein kinase, ATP-binding,
transferase, coiled coil, cell division, kinase; HET:
TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A*
3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A*
3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A*
2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Length = 284
Score = 74.6 bits (184), Expect = 3e-14
Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 5/82 (6%)
Query: 820 DHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIP----VSHNLEKELIRKEIDIMNQLH 875
D +DI +G G FG V+ RE++ I A K + +E + +R+EI+I + L
Sbjct: 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQ-LRREIEIQSHLR 72
Query: 876 HPKLINLHDAFEDDDEMVLIFE 897
HP ++ +++ F D + L+ E
Sbjct: 73 HPNILRMYNYFHDRKRIYLMLE 94
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI,
structural genomics, protein structure initiative; HET:
TPO; 2.20A {Homo sapiens}
Length = 314
Score = 75.1 bits (185), Expect = 3e-14
Identities = 24/78 (30%), Positives = 49/78 (62%), Gaps = 2/78 (2%)
Query: 820 DHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQLHHPKL 879
+ +D+LE++G G++G V++ ++TG I A K +PV +L++ I KEI IM Q P +
Sbjct: 29 EVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQE--IIKEISIMQQCDSPHV 86
Query: 880 INLHDAFEDDDEMVLIFE 897
+ + ++ + ++ ++ E
Sbjct: 87 VKYYGSYFKNTDLWIVME 104
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase,
ATP-binding, disease mutation, nucleoti binding,
phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB:
3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A*
2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A*
3orn_A* 3os3_A* 3sls_A* 1s9i_A*
Length = 360
Score = 75.7 bits (186), Expect = 4e-14
Identities = 20/82 (24%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Query: 820 DHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEK-ELIRKEIDIMNQLHHPK 878
D ++ + E+G G GVV + + +G + A K I + I +E+ ++++ + P
Sbjct: 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 92
Query: 879 LINLHDAFEDDDEMVLIFEVLD 900
++ + AF D E+ + E +D
Sbjct: 93 IVGFYGAFYSDGEISICMEHMD 114
>2cum_A Tenascin-X; hexabrachion-like, fibronectin type III domain,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
b.1.2.1
Length = 105
Score = 69.4 bits (170), Expect = 4e-14
Identities = 17/93 (18%), Positives = 31/93 (33%), Gaps = 6/93 (6%)
Query: 670 PDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSWIRVGNTRFTTMAI 729
+ P+ +++ + L W P Y++ + + T+ +
Sbjct: 8 LEAPRDLEAKEVTPRTALLTWTEPP----VRPAGYLLSFHTPGGQTQEILLPGGITSHQL 63
Query: 730 TGLSPGHQYEFRVYAENVYGRSDPSTTSDLITT 762
GL P Y R+ A P +TS TT
Sbjct: 64 LGLFPSTSYNARLQAMWGQSLLPPVSTS--FTT 94
Score = 64.8 bits (158), Expect = 2e-12
Identities = 17/103 (16%), Positives = 39/103 (37%), Gaps = 7/103 (6%)
Query: 1230 KPSPPQGPLDVSDITPESCSLSWKPPLDDGGSPITNYVVEKYESATGFWSKLSSFVRSPA 1289
P+ L+ ++TP + L+W P Y++ + + G ++ +
Sbjct: 7 GLEAPRD-LEAKEVTPRTALLTWTEPP----VRPAGYLLS-FHTPGGQTQEILLPGGITS 60
Query: 1290 YDVFGLETNRQYRFRVRAENQYGVSEPLELDNSITAKFPFTVP 1332
+ + GL + Y R++A + P+ + T + P
Sbjct: 61 HQLLGLFPSTSYNARLQAMWGQSLLPPVST-SFTTGGLRISGP 102
Score = 62.9 bits (153), Expect = 7e-12
Identities = 17/90 (18%), Positives = 29/90 (32%), Gaps = 7/90 (7%)
Query: 902 PHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWT-KVSSYVTTPFV 960
P +L A E + L WT P Y++ + +T+
Sbjct: 8 LEAPRDLEAKEVTPRTALLTWTEPP----VRPAGYLLSFHTPGGQTQEILLPGGITS--H 61
Query: 961 RVRNLAIGSTYEFRVMAENQYGLSKPALTI 990
++ L ++Y R+ A L P T
Sbjct: 62 QLLGLFPSTSYNARLQAMWGQSLLPPVSTS 91
Score = 62.1 bits (151), Expect = 1e-11
Identities = 17/95 (17%), Positives = 31/95 (32%), Gaps = 6/95 (6%)
Query: 272 NITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTC 331
+ + P L+ E+T T L W P ++ Y++ I
Sbjct: 3 SGSSGLEAPRD-LEAKEVTPRTALLTWTEPP----VRPAGYLLSFHTPGGQTQ-EILLPG 56
Query: 332 HDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGI 366
T+ + GL Y + A+ + PP+
Sbjct: 57 GITSHQLLGLFPSTSYNARLQAMWGQSLLPPVSTS 91
Score = 62.1 bits (151), Expect = 1e-11
Identities = 17/95 (17%), Positives = 31/95 (32%), Gaps = 6/95 (6%)
Query: 1879 NITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTC 1938
+ + P L+ E+T T L W P ++ Y++ I
Sbjct: 3 SGSSGLEAPRD-LEAKEVTPRTALLTWTEPP----VRPAGYLLSFHTPGGQTQ-EILLPG 56
Query: 1939 HDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGI 1973
T+ + GL Y + A+ + PP+
Sbjct: 57 GITSHQLLGLFPSTSYNARLQAMWGQSLLPPVSTS 91
Score = 54.0 bits (130), Expect = 1e-08
Identities = 19/91 (20%), Positives = 28/91 (30%), Gaps = 6/91 (6%)
Query: 377 KPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQ 436
P +V L+W +P R GY + H G Q + + +
Sbjct: 7 GLEAPRDLEAKEVTPRTALLTWTEPP----VRPAGYLLSFHTPGGQ-TQEILLP-GGITS 60
Query: 437 INIPNLIEGRQYEFRVYAQNEAGLSLPSSAS 467
+ L Y R+ A L P S S
Sbjct: 61 HQLLGLFPSTSYNARLQAMWGQSLLPPVSTS 91
Score = 54.0 bits (130), Expect = 1e-08
Identities = 19/91 (20%), Positives = 28/91 (30%), Gaps = 6/91 (6%)
Query: 1984 KPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQ 2043
P +V L+W +P R GY + H G Q + + +
Sbjct: 7 GLEAPRDLEAKEVTPRTALLTWTEPP----VRPAGYLLSFHTPGGQ-TQEILLP-GGITS 60
Query: 2044 INIPNLIEGRQYEFRVYAQNEAGLSLPSSAS 2074
+ L Y R+ A L P S S
Sbjct: 61 HQLLGLFPSTSYNARLQAMWGQSLLPPVSTS 91
Score = 36.7 bits (85), Expect = 0.014
Identities = 16/122 (13%), Positives = 29/122 (23%), Gaps = 38/122 (31%)
Query: 1002 PGAPGAPKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSL 1061
AP + + T + L W++P Y++ +P
Sbjct: 8 LEAPRDLEAKEVTPRTALLTWTEPP----VRPAGYLLSFHTPGGQTQE----ILLPGGIT 59
Query: 1062 KYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPWSS 1121
+ L L + Y R+ A+ P S
Sbjct: 60 SHQL------------------------------LGLFPSTSYNARLQAMWGQSLLPPVS 89
Query: 1122 SS 1123
+S
Sbjct: 90 TS 91
Score = 35.1 bits (81), Expect = 0.038
Identities = 10/53 (18%), Positives = 16/53 (30%), Gaps = 2/53 (3%)
Query: 22 YIIERREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPS 74
Y++ GG + S +L L Y R+ A+ P
Sbjct: 38 YLLSFHTPGGQT--QEILLPGGITSHQLLGLFPSTSYNARLQAMWGQSLLPPV 88
Score = 34.0 bits (78), Expect = 0.11
Identities = 7/29 (24%), Positives = 10/29 (34%)
Query: 1653 SFSVLNLVEGNDYEFRIIAVNAIGKSEPS 1681
S +L L Y R+ A+ P
Sbjct: 60 SHQLLGLFPSTSYNARLQAMWGQSLLPPV 88
Score = 30.9 bits (70), Expect = 1.3
Identities = 10/47 (21%), Positives = 17/47 (36%), Gaps = 4/47 (8%)
Query: 1330 TVPDPPGQPQIVDWDTNNATLMWDRPRTDGGSKIQGYKMLLKTPTGE 1376
+ + P + + A L W P + GY + TP G+
Sbjct: 6 SGLEAPRDLEAKEVTPRTALLTWTEPP----VRPAGYLLSFHTPGGQ 48
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros
picked threonine kinase, SGC, structural genomics
consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB:
3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Length = 313
Score = 74.7 bits (184), Expect = 5e-14
Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Query: 821 HYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKEL--IRKEIDIMNQLHHP- 877
Y IL++IG+G V + + I+A K++ + + L R EI +N+L
Sbjct: 29 IYSILKQIGSGGSSKVFQVL-NEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS 87
Query: 878 -KLINLHDAFEDDDEMVLIFE 897
K+I L+D D + ++ E
Sbjct: 88 DKIIRLYDYEITDQYIYMVME 108
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase,
cell cycle, inhibition, cyclin-dependent kinase, cancer,
ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A*
2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A*
1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A*
1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Length = 299
Score = 74.1 bits (183), Expect = 5e-14
Identities = 28/86 (32%), Positives = 50/86 (58%), Gaps = 8/86 (9%)
Query: 820 DHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKE-----LIRKEIDIMNQL 874
+++ +E+IG G +GVV++ R + TG + A K I + E E IR EI ++ +L
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT--ETEGVPSTAIR-EISLLKEL 59
Query: 875 HHPKLINLHDAFEDDDEMVLIFEVLD 900
+HP ++ L D ++++ L+FE L
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLH 85
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant,
structural genomics consortium, SCG, binding,
nucleotide-binding, phosphoprotein; HET: STU; 2.26A
{Homo sapiens} PDB: 3enm_A
Length = 290
Score = 73.8 bits (182), Expect = 6e-14
Identities = 22/83 (26%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Query: 820 DHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEK-ELIRKEIDI-MNQLHHP 877
D + + E+G GA+GVV + R +G I A K I + N ++ + + ++DI M + P
Sbjct: 7 DDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCP 66
Query: 878 KLINLHDAFEDDDEMVLIFEVLD 900
+ + A + ++ + E++D
Sbjct: 67 FTVTFYGALFREGDVWICMELMD 89
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant,
catalytic domain, synthetic inhibitor, TRAN transferase
inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB:
4g34_A*
Length = 299
Score = 73.5 bits (181), Expect = 7e-14
Identities = 16/74 (21%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 820 DHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHN-LEKELIRKEIDIMNQLHHPK 878
++ ++ +G G FGVV + + +A K I + + L +E + +E+ + +L HP
Sbjct: 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPG 64
Query: 879 LINLHDAFEDDDEM 892
++ +A+ + +
Sbjct: 65 IVRYFNAWLEKNTT 78
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase
activation, phosphorylation, ATP- binding,
nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Length = 343
Score = 74.4 bits (183), Expect = 7e-14
Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Query: 821 HYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSH--NLEKELIRKEIDIMNQLHHP- 877
Y IL++IG+G V + + I+A K++ + N + R EI +N+L
Sbjct: 10 IYSILKQIGSGGSSKVFQVL-NEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS 68
Query: 878 -KLINLHDAFEDDDEMVLIFE 897
K+I L+D D + ++ E
Sbjct: 69 DKIIRLYDYEITDQYIYMVME 89
>2gys_A Cytokine receptor common beta chain; dimer of interlocking chains of
fibronectin-III domains, FOU fibronectin-III domains PER
chain; HET: NAG FUC BMA NDG; 2.70A {Homo sapiens} SCOP:
b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1gh7_A* 3cxe_A*
1egj_A* 1c8p_A
Length = 419
Score = 75.0 bits (183), Expect = 8e-14
Identities = 51/444 (11%), Positives = 101/444 (22%), Gaps = 76/444 (17%)
Query: 904 PPENLHADEFAGDSLTLYWTPPRDNGGSEITNY------------VVEKKDYNSTVWTKV 951
P + L +T W +D N V + W+
Sbjct: 5 PLQTLRCYNDYTSHITCRWADTQDAQRL--VNVTLIRRVNEDLLEPVSCDLSDDMPWSAC 62
Query: 952 SSYVTTP---FVRVRNLAIGSTYEFRVMAENQYGLSKPALTIDPIKAKHPFDVPGAPGAP 1008
P + ++ + F + G ++ P D+
Sbjct: 63 PHPRCVPRRCVIPCQSFVVTDVDYFSFQPDRPLGTRLTVTLTQHVQPPEPRDLQ------ 116
Query: 1009 KGVDSTEDSISLVWSKPRHDGGSPIQ-----RYIVEKRLISDDKWIKASMAHIPDTSLKY 1063
+ + +D L WS S + V + D W A++ +
Sbjct: 117 --ISTDQDHFLLTWSVALGSPQSHWLSPGDLEFEVVYKR-LQDSWEDAAILLSNTSQATL 173
Query: 1064 VLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPWSSSS 1123
L+ + Y RV A G S
Sbjct: 174 ------------------------------GPEHLMPSSTYVARVRTRLAPGSRLSGRPS 203
Query: 1124 DIIMCCAPPCAPKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRI 1183
P + + + + + + + G
Sbjct: 204 KWSPEVCWDSQPGDEAQPQNLECFFDGAAVLSCSWEVRKEVASSVSFGLFYKPSPDAGSA 263
Query: 1184 KFETSENQTIYRNKSAKRATDSGSYTIQLVNTVGSDSASCKV-----------YVVDKPS 1232
E + + I + + V V + +
Sbjct: 264 VLLREEECSPVLREGLGSLHTRHHCQIPVPDPATHGQYIVSVQPRRAEKHIKSSVNIQMA 323
Query: 1233 PPQGPLDVSDITPESCSLSWKPPLDDGGSPITNYVVEKYESATGFW-SKLSSFVRSPAYD 1291
PP L V+ +S SL W+ + ++ + + SK + + +
Sbjct: 324 PPS--LQVTK-DGDSYSLRWETMKMRYEHIDHTFEIQYRKDTATWKDSKTETLQNAHSMA 380
Query: 1292 VFGLETNRQYRFRVRAENQYGVSE 1315
+ LE + +Y RVR
Sbjct: 381 LPALEPSTRYWARVRVRTSRTGYN 404
Score = 69.3 bits (168), Expect = 5e-12
Identities = 54/368 (14%), Positives = 99/368 (26%), Gaps = 47/368 (12%)
Query: 621 GHFHVETSERHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQISDRPDPPQFPTVED 680
H R ++ + D + + LG + Q +P P+ +
Sbjct: 61 ACPHPRCVPRRCVIPCQSFVVTDVDYFSFQPDRPLGTRLTVTLTQ-HVQPPEPRDLQIST 119
Query: 681 IGHDSLALVWRAPIWDGGSNITN-----YIVEKREHPMSSW---IRVGNTRFTTMAITGL 732
D L W + S+ + + V + S I + NT T+ L
Sbjct: 120 DQ-DHFLLTWSVALGSPQSHWLSPGDLEFEVVYKRLQDSWEDAAILLSNTSQATLGPEHL 178
Query: 733 SPGHQYEFRVYAENVYGRS---DPSTTSDLITTKDTFKKQIKKRQYDFDETGKK-IRGKA 788
P Y RV G PS S + + + + + G +
Sbjct: 179 MPSSTYVARVRTRLAPGSRLSGRPSKWSPEVCWDSQPGDEAQPQNLECFFDGAAVLSCSW 238
Query: 789 DEKVSDYDQYVFDIYSKYVPQPVDIKTSSVYDHYDILEEIGTGAFGVVHRCRERKTGNIF 848
+ + F ++ K P + +L E G G+ H C+
Sbjct: 239 EVRKEVASSVSFGLFYKPSPDAGSAVLLREEECSPVLRE-GLGSLHTRHHCQ-------- 289
Query: 849 AAKFIPVSHNLEKELIRKEIDIMNQLHHPKLINLHDAFEDDDEMVLIFEVLDRPHPPENL 908
IPV + K I + PP
Sbjct: 290 ----IPVPDPATHGQYIVSVQPRR---AEKHIKSSVN--------------IQMAPPSLQ 328
Query: 909 HADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTKVSSYVTTPF-VRVRNLAI 967
+ GDS +L W + + ++ + +T + + + + L
Sbjct: 329 VTKD--GDSYSLRWETMKMRYEHIDHTFEIQYRKDTATWKDSKTETLQNAHSMALPALEP 386
Query: 968 GSTYEFRV 975
+ Y RV
Sbjct: 387 STRYWARV 394
Score = 58.5 bits (140), Expect = 1e-08
Identities = 20/171 (11%), Positives = 50/171 (29%), Gaps = 10/171 (5%)
Query: 295 TLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAV 354
+ W K + V+ + + + + + + +
Sbjct: 235 SCSWEVRK-EVASSVSFGLFYKPSPDAGSAVLLREEECSPVLREGLGSLHTRHHCQIPVP 293
Query: 355 NENGMGPPLEGINPIKAKSPYD-----KPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRI 409
+ G + + P +A+ + +PP + V GD +L W+
Sbjct: 294 DPATHGQYIVSVQPRRAEKHIKSSVNIQMAPPSLQVT--KDGDSYSLRWETMKMRYEHID 351
Query: 410 QGYWIDKHEVGSDAWQRVNVAICAPSQ-INIPNLIEGRQYEFRVYAQNEAG 459
+ I ++ + W+ + + +P L +Y RV +
Sbjct: 352 HTFEI-QYRKDTATWKDSKTETLQNAHSMALPALEPSTRYWARVRVRTSRT 401
Score = 58.5 bits (140), Expect = 1e-08
Identities = 20/171 (11%), Positives = 50/171 (29%), Gaps = 10/171 (5%)
Query: 1902 TLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAV 1961
+ W K + V+ + + + + + + +
Sbjct: 235 SCSWEVRK-EVASSVSFGLFYKPSPDAGSAVLLREEECSPVLREGLGSLHTRHHCQIPVP 293
Query: 1962 NENGMGPPLEGINPIKAKSPYD-----KPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRI 2016
+ G + + P +A+ + +PP + V GD +L W+
Sbjct: 294 DPATHGQYIVSVQPRRAEKHIKSSVNIQMAPPSLQVT--KDGDSYSLRWETMKMRYEHID 351
Query: 2017 QGYWIDKHEVGSDAWQRVNVAICAPSQ-INIPNLIEGRQYEFRVYAQNEAG 2066
+ I ++ + W+ + + +P L +Y RV +
Sbjct: 352 HTFEI-QYRKDTATWKDSKTETLQNAHSMALPALEPSTRYWARVRVRTSRT 401
Score = 57.7 bits (138), Expect = 3e-08
Identities = 30/216 (13%), Positives = 64/216 (29%), Gaps = 42/216 (19%)
Query: 916 DSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTKVSSYVTTPFVRVRNLAIGSTYEFRV 975
L+ W ++ S ++ + K ++ + +P +R ++ + + ++
Sbjct: 232 AVLSCSWEVRKEVASS-VSFGLFYKPSPDAGSAVLLREEECSPVLREGLGSLHTRHHCQI 290
Query: 976 MAENQYGLSKPALTIDPIKAKHPF----DVPGAPGAPKG-VDSTEDSISLVWSKPRHDGG 1030
+ + +++ P +A+ ++ AP P V DS SL W +
Sbjct: 291 PVPDPATHGQYIVSVQPRRAEKHIKSSVNIQMAP--PSLQVTKDGDSYSLRWETMKMRYE 348
Query: 1031 SPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEGKSIGSERGSTAQFLELLLMF 1090
+ ++ R D K S + L
Sbjct: 349 HIDHTFEIQYR--KDTATWKDSKTETLQNAHSMAL------------------------- 381
Query: 1091 IPNRVTSLIENHEYEFRVCA--VNAAGQGPWSSSSD 1124
+L + Y RV G WS S+
Sbjct: 382 -----PALEPSTRYWARVRVRTSRTGYNGIWSEWSE 412
Score = 55.4 bits (132), Expect = 1e-07
Identities = 27/244 (11%), Positives = 56/244 (22%), Gaps = 16/244 (6%)
Query: 255 TVNLSNSSGSVSGTFTINITGLPGPPIGPLDVS-EITKHTCTLHWNPP------KYDGGL 307
S GT P P D+ + L W+ +
Sbjct: 84 VDYFSFQPDRPLGTRLTVTLTQHVQPPEPRDLQISTDQDHFLLTWSVALGSPQSHWLSPG 143
Query: 308 KVTHYVVERR-DISMPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGI 366
+ VV +R S + + T + L Y+ V G
Sbjct: 144 DLEFEVVYKRLQDSWEDAAILLSNTSQATLGPEHLMPSSTYVARVRTRLAPGSRLSGRPS 203
Query: 367 NPIKAKSPYDKPSPPGIPVVTQV---GGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDA 423
+P P + G ++ SW+ + S + +
Sbjct: 204 KWSPEVCWDSQPGDEAQPQNLECFFDGAAVLSCSWEVRKEVASSVS--FGLFYKPSPDAG 261
Query: 424 WQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEI 483
+ + ++ ++ + A SVQ + +
Sbjct: 262 SAVLLREEECSPVLREGLGSLHTRHHCQIPVPDPAT---HGQYIVSVQPRRAEKHIKSSV 318
Query: 484 IVPL 487
+ +
Sbjct: 319 NIQM 322
Score = 55.4 bits (132), Expect = 1e-07
Identities = 27/244 (11%), Positives = 56/244 (22%), Gaps = 16/244 (6%)
Query: 1862 TVNLSNSSGSVSGTFTINITGLPGPPIGPLDVS-EITKHTCTLHWNPP------KYDGGL 1914
S GT P P D+ + L W+ +
Sbjct: 84 VDYFSFQPDRPLGTRLTVTLTQHVQPPEPRDLQISTDQDHFLLTWSVALGSPQSHWLSPG 143
Query: 1915 KVTHYVVERR-DISMPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGI 1973
+ VV +R S + + T + L Y+ V G
Sbjct: 144 DLEFEVVYKRLQDSWEDAAILLSNTSQATLGPEHLMPSSTYVARVRTRLAPGSRLSGRPS 203
Query: 1974 NPIKAKSPYDKPSPPGIPVVTQV---GGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDA 2030
+P P + G ++ SW+ + S + +
Sbjct: 204 KWSPEVCWDSQPGDEAQPQNLECFFDGAAVLSCSWEVRKEVASSVS--FGLFYKPSPDAG 261
Query: 2031 WQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEI 2090
+ + ++ ++ + A SVQ + +
Sbjct: 262 SAVLLREEECSPVLREGLGSLHTRHHCQIPVPDPAT---HGQYIVSVQPRRAEKHIKSSV 318
Query: 2091 IVPL 2094
+ +
Sbjct: 319 NIQM 322
Score = 54.6 bits (130), Expect = 2e-07
Identities = 30/201 (14%), Positives = 59/201 (29%), Gaps = 18/201 (8%)
Query: 1203 TDSGSYTIQLVNTVGSDSASCKVYVVDKPSPPQGPLDVS-DITPESCSLSWKPPLDDGGS 1261
TD ++ Q +G+ + + P P D+ + L+W L S
Sbjct: 82 TDVDYFSFQPDRPLGTR----LTVTLTQHVQPPEPRDLQISTDQDHFLLTWSVALGSPQS 137
Query: 1262 PITNYVVEKYE-------SATGFWSKLSSFVRSPAYDVFGLETNRQYRFRVRAENQYGVS 1314
+ ++E + + L S L + Y RVR G
Sbjct: 138 HWLSPGDLEFEVVYKRLQDSWEDAAILLSNTSQATLGPEHLMPSSTYVARVRTRLAPGSR 197
Query: 1315 EPLELDNSITAKFPFTVPDPPGQPQIVDWDTNNATLM---WDRPRTDGGSKIQGYKMLLK 1371
+ P QPQ ++ + A ++ W+ + S L
Sbjct: 198 LSGRPSKWSPEVCWDSQPGDEAQPQNLECFFDGAAVLSCSWEVRKEVASS---VSFGLFY 254
Query: 1372 TPTGELPTTIWSKIRPTSSTV 1392
P+ + + + + S +
Sbjct: 255 KPSPDAGSAVLLREEECSPVL 275
Score = 51.5 bits (122), Expect = 2e-06
Identities = 45/313 (14%), Positives = 83/313 (26%), Gaps = 28/313 (8%)
Query: 293 TCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHDTTFIVQGLTEGQEYLFH-- 350
T W + L + + + C + + + +
Sbjct: 18 HITCRWADTQDAQRLVNVTLIRRVNEDLLEPVSCDLSDDMPWSACPHPRCVPRRCVIPCQ 77
Query: 351 --VMAVNENGMGPPLE--GINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGG 406
V+ + P G + + +P P ++ F L+W L
Sbjct: 78 SFVVTDVDYFSFQPDRPLGTRLTVTLTQHVQPPEPRDLQISTDQDHF-LLTWSVALGSPQ 136
Query: 407 SRIQGYWIDKHEV----GSDAWQRVNVAICAPSQ--INIPNLIEGRQYEFRVYAQNEAG- 459
S + EV D+W+ + + SQ + +L+ Y RV + G
Sbjct: 137 SHWLSPGDLEFEVVYKRLQDSWEDAAILLSNTSQATLGPEHLMPSSTYVARVRTRLAPGS 196
Query: 460 --LSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQ-----------NHNAQFQCTITG 506
PS S V +A + A + F
Sbjct: 197 RLSGRPSKWSPEVCWDSQPGDEAQPQNLECFFDGAAVLSCSWEVRKEVASSVSFGLFYKP 256
Query: 507 CPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKA 566
P + L E +P R + + + I +Y+ + K K+
Sbjct: 257 SPDAGSAVLLREEECSPVLREGLGSLHTRHHCQIPVPDPATHGQYIVSVQPRRAEKHIKS 316
Query: 567 ELII-MTAPKFNV 578
+ I M P V
Sbjct: 317 SVNIQMAPPSLQV 329
Score = 51.5 bits (122), Expect = 2e-06
Identities = 45/313 (14%), Positives = 83/313 (26%), Gaps = 28/313 (8%)
Query: 1900 TCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHDTTFIVQGLTEGQEYLFH-- 1957
T W + L + + + C + + + +
Sbjct: 18 HITCRWADTQDAQRLVNVTLIRRVNEDLLEPVSCDLSDDMPWSACPHPRCVPRRCVIPCQ 77
Query: 1958 --VMAVNENGMGPPLE--GINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGG 2013
V+ + P G + + +P P ++ F L+W L
Sbjct: 78 SFVVTDVDYFSFQPDRPLGTRLTVTLTQHVQPPEPRDLQISTDQDHF-LLTWSVALGSPQ 136
Query: 2014 SRIQGYWIDKHEV----GSDAWQRVNVAICAPSQ--INIPNLIEGRQYEFRVYAQNEAG- 2066
S + EV D+W+ + + SQ + +L+ Y RV + G
Sbjct: 137 SHWLSPGDLEFEVVYKRLQDSWEDAAILLSNTSQATLGPEHLMPSSTYVARVRTRLAPGS 196
Query: 2067 --LSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQ-----------NHNAQFQCTITG 2113
PS S V +A + A + F
Sbjct: 197 RLSGRPSKWSPEVCWDSQPGDEAQPQNLECFFDGAAVLSCSWEVRKEVASSVSFGLFYKP 256
Query: 2114 CPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKA 2173
P + L E +P R + + + I +Y+ + K K+
Sbjct: 257 SPDAGSAVLLREEECSPVLREGLGSLHTRHHCQIPVPDPATHGQYIVSVQPRRAEKHIKS 316
Query: 2174 ELII-MTAPKFNV 2185
+ I M P V
Sbjct: 317 SVNIQMAPPSLQV 329
Score = 51.2 bits (121), Expect = 3e-06
Identities = 24/158 (15%), Positives = 44/158 (27%), Gaps = 13/158 (8%)
Query: 901 RPHPPENLHADEFAGDSLTLYWTPPRDNGGSEITN-----YVVEKKDYNST--VWTKVSS 953
+P P +L D L W+ + S + + V K + + S
Sbjct: 108 QPPEPRDLQI-STDQDHFLLTWSVALGSPQSHWLSPGDLEFEVVYKRLQDSWEDAAILLS 166
Query: 954 YVTTPFVRVRNLAIGSTYEFRVMAENQYGLSKPALTIDPIKAKHPFDVPGAPGAPKGVDS 1013
+ + +L STY RV G PG P+ ++
Sbjct: 167 NTSQATLGPEHLMPSSTYVARVRTRLAPGSRLSGRPSKWSPEVCWDSQPGDEAQPQNLEC 226
Query: 1014 TEDS---ISLVWSKPRHDGGSPIQRYIVEKRLISDDKW 1048
D +S W + + + + + D
Sbjct: 227 FFDGAAVLSCSWEVRK--EVASSVSFGLFYKPSPDAGS 262
Score = 49.2 bits (116), Expect = 1e-05
Identities = 17/98 (17%), Positives = 32/98 (32%), Gaps = 4/98 (4%)
Query: 657 MDSAIVKIQISDRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSW 716
+K ++ + PP +D DS +L W + ++ R+ +
Sbjct: 309 RAEKHIKSSVNIQMAPPSLQVTKD--GDSYSLRWETMKMRYEHIDHTFEIQYRKDTATWK 366
Query: 717 IRVGNT--RFTTMAITGLSPGHQYEFRVYAENVYGRSD 752
T +MA+ L P +Y RV +
Sbjct: 367 DSKTETLQNAHSMALPALEPSTRYWARVRVRTSRTGYN 404
Score = 46.1 bits (108), Expect = 1e-04
Identities = 19/114 (16%), Positives = 35/114 (30%), Gaps = 8/114 (7%)
Query: 252 GDYTVNLSNSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTH 311
G Y V++ ++NI PP L V++ + +L W K
Sbjct: 299 GQYIVSVQPRRAEKHIKSSVNIQ--MAPP--SLQVTK-DGDSYSLRWETMKMRYEHIDHT 353
Query: 312 YVVE-RRDISMPHWICISTTCHDTTFIVQGLTEGQEYLFHV--MAVNENGMGPP 362
+ ++ R+D + T + + + L Y V G
Sbjct: 354 FEIQYRKDTATWKDSKTETLQNAHSMALPALEPSTRYWARVRVRTSRTGYNGIW 407
Score = 46.1 bits (108), Expect = 1e-04
Identities = 19/114 (16%), Positives = 35/114 (30%), Gaps = 8/114 (7%)
Query: 1859 GDYTVNLSNSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTH 1918
G Y V++ ++NI PP L V++ + +L W K
Sbjct: 299 GQYIVSVQPRRAEKHIKSSVNIQ--MAPP--SLQVTK-DGDSYSLRWETMKMRYEHIDHT 353
Query: 1919 YVVE-RRDISMPHWICISTTCHDTTFIVQGLTEGQEYLFHV--MAVNENGMGPP 1969
+ ++ R+D + T + + + L Y V G
Sbjct: 354 FEIQYRKDTATWKDSKTETLQNAHSMALPALEPSTRYWARVRVRTSRTGYNGIW 407
Score = 33.4 bits (75), Expect = 1.0
Identities = 43/405 (10%), Positives = 94/405 (23%), Gaps = 62/405 (15%)
Query: 1246 ESCSLSWKPPLDDGGSPITNYVVEKYESATGFWSKLSS-------FVRSPAYDVFGLETN 1298
+ W D N + +S + P
Sbjct: 17 SHITCRWADTQDAQRL--VNVTL-IRRVNEDLLEPVSCDLSDDMPWSACPHPRCVPRRCV 73
Query: 1299 RQYRFRVRAENQYGVSEPLE-LDNSITAKFPFTVPDPPGQPQIVDWDTNNATLMWDRPRT 1357
+ V + Y +P L +T V P + + D ++ L W
Sbjct: 74 IPCQSFVVTDVDYFSFQPDRPLGTRLTVTLTQHVQPPEPRDLQISTDQDHFLLTWSVALG 133
Query: 1358 DGGSKIQGYKML---LKTPTGELPTTIWSKIRPTSSTVYCKDT-------------TMNS 1401
S L + + + + +S T +
Sbjct: 134 SPQSHWLSPGDLEFEVVYKRLQDSWEDAAILLSNTSQATLGPEHLMPSSTYVARVRTRLA 193
Query: 1402 SNSEPGKQSGPVIVEEQPNKPVMDLSGVRDITVKAGEDFSIHVPFMAFPQPAAFWFANDS 1461
S + E + D + +++ + + + A+
Sbjct: 194 PGSRLSGRPSKWSPEVCWDSQPGDEAQPQNLECFFDGAAVLSCSWEVRKEVASSVSFGLF 253
Query: 1462 IIDDSDTRVHKQLTMNSASLVVKNSQRSDGGQY--RLQLKNPAGFDTATLHSRLRTLPDS 1519
D L S V++ S ++ ++ + +PA + + R
Sbjct: 254 YKPSPDAGSAVLLREEECSPVLREGLGSLHTRHHCQIPVPDPATHGQYIVSVQPRRAEKH 313
Query: 1520 VNPRCHLPSSTSKERPKFPTHPNHQPWLKWARASLTSKGVDSTEDSISLVWSKPRHDGGS 1579
+ ++ + P L+ V DS SL W +
Sbjct: 314 IKSSVNIQMAP--------------PSLQ----------VTKDGDSYSLRWETMKMRYEH 349
Query: 1580 PIQRYIVEKRLISDDKWIKASMAHIPDTSL---------KYVLWV 1615
+ ++ R + + S+ +Y V
Sbjct: 350 IDHTFEIQYRKDTATWKDSKTETLQNAHSMALPALEPSTRYWARV 394
Score = 31.9 bits (71), Expect = 3.0
Identities = 17/162 (10%), Positives = 39/162 (24%), Gaps = 16/162 (9%)
Query: 38 NDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPSICTTPVKICEFVGGEKPDFIVPL 97
N + + +L+ + Y R+ A G + + +
Sbjct: 164 LLSNTSQATLGPEHLMPSSTYVARVRTRLAPGSRLSGRPSKWSPEVCWDSQPGDEAQPQN 223
Query: 98 KDLVVPLGKLLTLQCEA--------------TGTPVPKCRWLRNGREISSGARYRVETAG 143
+ +L+ E +P L E S R + +
Sbjct: 224 LECFFDGAAVLSCSWEVRKEVASSVSFGLFYKPSPDAGSAVLLREEECSPVLREGLGSLH 283
Query: 144 GVFRLHFNEVTDVDNGDYT--CEAYNSVGFAHTSSRVKIGTP 183
+G Y + + +S +++ P
Sbjct: 284 TRHHCQIPVPDPATHGQYIVSVQPRRAEKHIKSSVNIQMAPP 325
Score = 31.9 bits (71), Expect = 3.0
Identities = 17/162 (10%), Positives = 39/162 (24%), Gaps = 16/162 (9%)
Query: 1645 NDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPSICTTPVKICEFVGGEKPDFIVPL 1704
N + + +L+ + Y R+ A G + + +
Sbjct: 164 LLSNTSQATLGPEHLMPSSTYVARVRTRLAPGSRLSGRPSKWSPEVCWDSQPGDEAQPQN 223
Query: 1705 KDLVVPLGKLLTLQCEA--------------TGTPVPKCRWLRNGREISSGARYRVETAG 1750
+ +L+ E +P L E S R + +
Sbjct: 224 LECFFDGAAVLSCSWEVRKEVASSVSFGLFYKPSPDAGSAVLLREEECSPVLREGLGSLH 283
Query: 1751 GVFRLHFNEVTDVDNGDYT--CEAYNSVGFAHTSSRVKIGTP 1790
+G Y + + +S +++ P
Sbjct: 284 TRHHCQIPVPDPATHGQYIVSVQPRRAEKHIKSSVNIQMAPP 325
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase
inhibitor complex, transferase-transferase activator
complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A*
1ung_A* 1unl_A* 1h4l_A
Length = 292
Score = 73.3 bits (181), Expect = 8e-14
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 820 DHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKE-----LIRKEIDIMNQL 874
Y+ LE+IG G +G V + + R+T I A K + + + E +R EI ++ +L
Sbjct: 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDD--DDEGVPSSALR-EICLLKEL 58
Query: 875 HHPKLINLHDAFEDDDEMVLIFEVLD 900
H ++ LHD D ++ L+FE D
Sbjct: 59 KHKNIVRLHDVLHSDKKLTLVFEFCD 84
>2h41_A Fibronectin; beta sandwich, cell adhesion, structural protein; NMR
{Homo sapiens} PDB: 2h45_A
Length = 95
Score = 67.9 bits (166), Expect = 9e-14
Identities = 17/97 (17%), Positives = 33/97 (34%), Gaps = 8/97 (8%)
Query: 668 DRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSW---IRVGNTRF 724
+V +I S + W + ++ + VE + + +T
Sbjct: 4 GSHLVATSESVTEITASSFVVSWVSA----SDTVSGFRVEYELSEEGDEPQYLDLPSTA- 58
Query: 725 TTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLIT 761
T++ I L PG +Y VY + G ++ T
Sbjct: 59 TSVNIPDLLPGRKYIVNVYQISEDGEQSLILSTSQTT 95
Score = 66.0 bits (161), Expect = 5e-13
Identities = 18/96 (18%), Positives = 35/96 (36%), Gaps = 4/96 (4%)
Query: 374 PYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICA 433
P VT++ +SW D + G+ ++ +
Sbjct: 2 PLGSHLVATSESVTEITASSFVVSWVSASD----TVSGFRVEYELSEEGDEPQYLDLPST 57
Query: 434 PSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNS 469
+ +NIP+L+ GR+Y VY +E G +++
Sbjct: 58 ATSVNIPDLLPGRKYIVNVYQISEDGEQSLILSTSQ 93
Score = 66.0 bits (161), Expect = 5e-13
Identities = 18/96 (18%), Positives = 35/96 (36%), Gaps = 4/96 (4%)
Query: 1981 PYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICA 2040
P VT++ +SW D + G+ ++ +
Sbjct: 2 PLGSHLVATSESVTEITASSFVVSWVSASD----TVSGFRVEYELSEEGDEPQYLDLPST 57
Query: 2041 PSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNS 2076
+ +NIP+L+ GR+Y VY +E G +++
Sbjct: 58 ATSVNIPDLLPGRKYIVNVYQISEDGEQSLILSTSQ 93
Score = 64.8 bits (158), Expect = 1e-12
Identities = 17/97 (17%), Positives = 33/97 (34%), Gaps = 6/97 (6%)
Query: 1229 DKPSPPQGPLDVSDITPESCSLSWKPPLDDGGSPITNYVVEKYESATGFWSKLSSFVRSP 1288
V++IT S +SW D ++ + VE S G + +
Sbjct: 4 GSHLVATS-ESVTEITASSFVVSWVSASD----TVSGFRVEYELSEEGDEPQYLDLPSTA 58
Query: 1289 -AYDVFGLETNRQYRFRVRAENQYGVSEPLELDNSIT 1324
+ ++ L R+Y V ++ G + + T
Sbjct: 59 TSVNIPDLLPGRKYIVNVYQISEDGEQSLILSTSQTT 95
Score = 63.7 bits (155), Expect = 3e-12
Identities = 16/96 (16%), Positives = 33/96 (34%), Gaps = 6/96 (6%)
Query: 275 GLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHW-ICISTTCHD 333
G V+EIT + + W V+ + VE +
Sbjct: 4 GSHLVATS-ESVTEITASSFVVSWVSASD----TVSGFRVEYELSEEGDEPQYLDLPSTA 58
Query: 334 TTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPI 369
T+ + L G++Y+ +V ++E+G + +
Sbjct: 59 TSVNIPDLLPGRKYIVNVYQISEDGEQSLILSTSQT 94
Score = 63.7 bits (155), Expect = 3e-12
Identities = 16/96 (16%), Positives = 33/96 (34%), Gaps = 6/96 (6%)
Query: 1882 GLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHW-ICISTTCHD 1940
G V+EIT + + W V+ + VE +
Sbjct: 4 GSHLVATS-ESVTEITASSFVVSWVSASD----TVSGFRVEYELSEEGDEPQYLDLPSTA 58
Query: 1941 TTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPI 1976
T+ + L G++Y+ +V ++E+G + +
Sbjct: 59 TSVNIPDLLPGRKYIVNVYQISEDGEQSLILSTSQT 94
Score = 61.0 bits (148), Expect = 3e-11
Identities = 14/91 (15%), Positives = 26/91 (28%), Gaps = 5/91 (5%)
Query: 900 DRPHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTKVSS-YVTTP 958
+ E S + W D ++ + VE + + T
Sbjct: 4 GSHLVATSESVTEITASSFVVSWVSASDT----VSGFRVEYELSEEGDEPQYLDLPSTAT 59
Query: 959 FVRVRNLAIGSTYEFRVMAENQYGLSKPALT 989
V + +L G Y V ++ G L+
Sbjct: 60 SVNIPDLLPGRKYIVNVYQISEDGEQSLILS 90
Score = 51.0 bits (122), Expect = 9e-08
Identities = 14/126 (11%), Positives = 29/126 (23%), Gaps = 36/126 (28%)
Query: 998 PFDVPGAPGAPKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIP 1057
P + + T S + W + + VE L + +
Sbjct: 2 PLGSHLVATSESVTEITASSFVVSWVSAS----DTVSGFRVEYELSEEGDEPQYLDLPST 57
Query: 1058 DTSLKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQG 1117
TS+ + L+ +Y V ++ G+
Sbjct: 58 ATSV--------------------------------NIPDLLPGRKYIVNVYQISEDGEQ 85
Query: 1118 PWSSSS 1123
S+
Sbjct: 86 SLILST 91
Score = 41.7 bits (98), Expect = 2e-04
Identities = 8/58 (13%), Positives = 21/58 (36%)
Query: 22 YIIERREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPSICTTP 79
+ +E + D S ++ +L+ G Y + ++ G+ + T+
Sbjct: 36 FRVEYELSEEGDEPQYLDLPSTATSVNIPDLLPGRKYIVNVYQISEDGEQSLILSTSQ 93
Score = 41.0 bits (96), Expect = 3e-04
Identities = 13/128 (10%), Positives = 29/128 (22%), Gaps = 49/128 (38%)
Query: 1559 VDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEG 1618
+ T S + W + + VE L + + TS
Sbjct: 15 TEITASSFVVSWVSAS----DTVSGFRVEYELSEEGDEPQYLDLPSTATS---------- 60
Query: 1619 KSIGSERGSTAQFLEREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKS 1678
++ +L+ G Y + ++ G+
Sbjct: 61 -----------------------------------VNIPDLLPGRKYIVNVYQISEDGEQ 85
Query: 1679 EPSICTTP 1686
+ T+
Sbjct: 86 SLILSTSQ 93
Score = 29.8 bits (67), Expect = 2.7
Identities = 6/65 (9%), Positives = 21/65 (32%), Gaps = 5/65 (7%)
Query: 1328 PFTVPDPPGQPQIVDWDTNNATLMWDRPRTDGGSKIQGYKMLLKTPTGELPTTIWSKIRP 1387
P + + ++ + W + G++ + + E + +
Sbjct: 2 PLGSHLVATSESVTEITASSFVVSWVSAS----DTVSGFR-VEYELSEEGDEPQYLDLPS 56
Query: 1388 TSSTV 1392
T+++V
Sbjct: 57 TATSV 61
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon,
OKT3 FAB, signaling protein/antibiotic complex; 2.10A
{Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Length = 204
Score = 71.5 bits (174), Expect = 9e-14
Identities = 22/188 (11%), Positives = 49/188 (26%), Gaps = 35/188 (18%)
Query: 108 LTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYN 167
+ L C W ++G+ I + + + G Y C+
Sbjct: 21 VLLTC---DAEAKNITWFKDGKMIGFLTEDK-------KKWNLGSNAKDPRGMYQCKGSQ 70
Query: 168 SVGFA-HTSSRVKIGTPPR-----IDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLT--- 218
+ R+ + D +G + ++ P +VS++
Sbjct: 71 NKSKPLQVYYRMGSADDAKKDAAKKDDAKKDDAKKDGSDGNEEMGGITQTPYKVSISGTT 130
Query: 219 ----------------KNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSS 262
N + + D+ K D+ + + E +G Y S
Sbjct: 131 VILTCPQYPGSEILWQHNDKNIGGDEDDKNIGSDEDHLSLKEFSELEQSGYYVCYPRGSK 190
Query: 263 GSVSGTFT 270
+ +
Sbjct: 191 PEDANFYL 198
Score = 71.5 bits (174), Expect = 9e-14
Identities = 22/188 (11%), Positives = 49/188 (26%), Gaps = 35/188 (18%)
Query: 1715 LTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYN 1774
+ L C W ++G+ I + + + G Y C+
Sbjct: 21 VLLTC---DAEAKNITWFKDGKMIGFLTEDK-------KKWNLGSNAKDPRGMYQCKGSQ 70
Query: 1775 SVGFA-HTSSRVKIGTPPR-----IDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLT--- 1825
+ R+ + D +G + ++ P +VS++
Sbjct: 71 NKSKPLQVYYRMGSADDAKKDAAKKDDAKKDDAKKDGSDGNEEMGGITQTPYKVSISGTT 130
Query: 1826 ----------------KNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSS 1869
N + + D+ K D+ + + E +G Y S
Sbjct: 131 VILTCPQYPGSEILWQHNDKNIGGDEDDKNIGSDEDHLSLKEFSELEQSGYYVCYPRGSK 190
Query: 1870 GSVSGTFT 1877
+ +
Sbjct: 191 PEDANFYL 198
Score = 62.6 bits (151), Expect = 1e-10
Identities = 21/176 (11%), Positives = 38/176 (21%), Gaps = 29/176 (16%)
Query: 506 GCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGV---- 561
I+W K + I + S Y C+
Sbjct: 26 DAEAKNITWFKDGKMIGFLTED-------KKKWNLGSNAKDPRGMYQCKGSQNKSKPLQV 78
Query: 562 --------KSTKAELIIMTAPKFNVPPRFRD-TAYFDKGENVVVKIPFTG---------Y 603
+ K A K + D K+ +G Y
Sbjct: 79 YYRMGSADDAKKDAAKKDDAKKDDAKKDGSDGNEEMGGITQTPYKVSISGTTVILTCPQY 138
Query: 604 PKPKITWYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAPYRVVAENDLGMDS 659
P +I W +++ I S+ + + + Y D+
Sbjct: 139 PGSEILWQHNDKNIGGDEDDKNIGSDEDHLSLKEFSELEQSGYYVCYPRGSKPEDA 194
Score = 57.6 bits (138), Expect = 4e-09
Identities = 27/176 (15%), Positives = 46/176 (26%), Gaps = 14/176 (7%)
Query: 1606 DTSLKYVLWVSEGKSIGSERGSTAQF----LEREVGGAIWLKCNDYNVLECSFSVLNLVE 1661
D K + W +GK IG ++ ++ G C V +
Sbjct: 26 DAEAKNITWFKDGKMIGFLTEDKKKWNLGSNAKDPRGMYQ--CKGSQNKSKPLQVYYRMG 83
Query: 1662 GNDYEFRIIAVNAIGKSEPSICTTPVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEA 1721
D + A K + + E G + + V + G + L C
Sbjct: 84 SADDAKKDAAKKDDAKKDDAKKDGSDGNEEMGGITQTPYKVSIS------GTTVILTCPQ 137
Query: 1722 TGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVG 1777
P + W N + I + + +G Y C S
Sbjct: 138 Y--PGSEILWQHNDKNIGGDEDDKNIGSDEDHLSLKEFSELEQSGYYVCYPRGSKP 191
Score = 55.7 bits (133), Expect = 2e-08
Identities = 10/105 (9%), Positives = 21/105 (20%), Gaps = 2/105 (1%)
Query: 460 LSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSR 519
+ + + + I +I C P I W +
Sbjct: 93 AKKDDAKKDDAKKDGSDGNEEMGGITQTPYKVSISGTTVILTCPQY--PGSEILWQHNDK 150
Query: 520 EITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKST 564
I + + + + YVC +
Sbjct: 151 NIGGDEDDKNIGSDEDHLSLKEFSELEQSGYYVCYPRGSKPEDAN 195
Score = 55.7 bits (133), Expect = 2e-08
Identities = 10/105 (9%), Positives = 21/105 (20%), Gaps = 2/105 (1%)
Query: 2067 LSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSR 2126
+ + + + I +I C P I W +
Sbjct: 93 AKKDDAKKDDAKKDGSDGNEEMGGITQTPYKVSISGTTVILTCPQY--PGSEILWQHNDK 150
Query: 2127 EITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKST 2171
I + + + + YVC +
Sbjct: 151 NIGGDEDDKNIGSDEDHLSLKEFSELEQSGYYVCYPRGSKPEDAN 195
Score = 54.9 bits (131), Expect = 5e-08
Identities = 19/134 (14%), Positives = 32/134 (23%), Gaps = 8/134 (5%)
Query: 37 CNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPSICTTPVKICEFVGGEKPDFIVP 96
C V + D + A K + + E G + + V
Sbjct: 66 CKGSQNKSKPLQVYYRMGSADDAKKDAAKKDDAKKDDAKKDGSDGNEEMGGITQTPYKVS 125
Query: 97 LKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDV 156
+ G + L C P + W N + I + +
Sbjct: 126 IS------GTTVILTCPQY--PGSEILWQHNDKNIGGDEDDKNIGSDEDHLSLKEFSELE 177
Query: 157 DNGDYTCEAYNSVG 170
+G Y C S
Sbjct: 178 QSGYYVCYPRGSKP 191
Score = 38.7 bits (89), Expect = 0.012
Identities = 7/55 (12%), Positives = 11/55 (20%), Gaps = 7/55 (12%)
Query: 2113 GCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGG 2167
I+W K + I + S Y C+
Sbjct: 26 DAEAKNITWFKDGKMIGFLTED-------KKKWNLGSNAKDPRGMYQCKGSQNKS 73
Score = 37.6 bits (86), Expect = 0.021
Identities = 15/79 (18%), Positives = 26/79 (32%), Gaps = 4/79 (5%)
Query: 1149 LAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQTIYRNKSAKRATDSGSY 1208
++G +T P P +W N + D K ++ K SG Y
Sbjct: 126 ISGTTVILTCPQY--PGSEILWQHNDKNIGGDEDDKN-IGSDEDHLSLKEFSELEQSGYY 182
Query: 1209 TIQLVNTVGSDSASCKVYV 1227
+ D A+ +Y+
Sbjct: 183 VCYPRGSKPED-ANFYLYL 200
Score = 32.6 bits (73), Expect = 1.1
Identities = 17/114 (14%), Positives = 35/114 (30%), Gaps = 5/114 (4%)
Query: 1396 DTTMNSSNSEPGKQSGPVIVEEQPNKPVMDLSGVRDITVKAGEDFSIHVPFMAFPQPAAF 1455
D +++ + K+ N+ + ++ +G + P +P
Sbjct: 87 DAKKDAAKKDDAKKDDAKKDGSDGNEEMGGITQTPYKVSISGTTVILTCP--QYPGSEIL 144
Query: 1456 WFANDSIIDDSDTRVHKQLTMNSASLVVKN-SQRSDGGQYRLQLKNPAGFDTAT 1508
W ND I + K + + L +K S+ G Y + D
Sbjct: 145 WQHNDKNIGGDED--DKNIGSDEDHLSLKEFSELEQSGYYVCYPRGSKPEDANF 196
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain,
cell adhesion, cell junction, glycoprotein,
immunoglobulin domain, membrane; HET: NAG FUC; 2.19A
{Mus musculus} PDB: 3mj7_A* 3mj9_A*
Length = 268
Score = 73.0 bits (178), Expect = 1e-13
Identities = 41/259 (15%), Positives = 75/259 (28%), Gaps = 53/259 (20%)
Query: 91 PDFIVPLKDLVVPLGKLLTLQC---EATGTPVPKCRWLRNGREISS-------------- 133
P V L V +G+ + + C V + WL + + +
Sbjct: 6 PGLTVSSPQLRVHVGESVLMGCVVQRTEEKHVDRVDWLFSKDKDDASEYVLFYYSNLSVP 65
Query: 134 GARYR------VETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRID 187
R++ +T L +V D G YTCE V++ P
Sbjct: 66 TGRFQNRSHLVGDTFHNDGSLLLQDVQKADEGIYTCEIRLKNESMVMKKPVELWVLPE-- 123
Query: 188 RMPNALYIPEGDNTKVKIFYAGDQP---MEVSLTKNGR------------------VVQS 226
P L + GD T+++ + +V+ + QS
Sbjct: 124 -EPRDLRVRVGDTTQMRCSIQSTEEKRVTKVNWMFSSGSHTEEETVLSYDSNMRSGKFQS 182
Query: 227 DDRFKFTVLDDYII------IFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPP 280
RF+ V I I ++ +++ D G YT ++ T +++
Sbjct: 183 LGRFRNRVDLTGDISRNDGSIKLQTVKESDQGIYTCSIYVGKLESRKTIVLHVVQDEFQR 242
Query: 281 IGPLDVSEITKHTCTLHWN 299
L+ N
Sbjct: 243 TISPTPPTDKGQQGILNGN 261
Score = 73.0 bits (178), Expect = 1e-13
Identities = 41/259 (15%), Positives = 75/259 (28%), Gaps = 53/259 (20%)
Query: 1698 PDFIVPLKDLVVPLGKLLTLQC---EATGTPVPKCRWLRNGREISS-------------- 1740
P V L V +G+ + + C V + WL + + +
Sbjct: 6 PGLTVSSPQLRVHVGESVLMGCVVQRTEEKHVDRVDWLFSKDKDDASEYVLFYYSNLSVP 65
Query: 1741 GARYR------VETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRID 1794
R++ +T L +V D G YTCE V++ P
Sbjct: 66 TGRFQNRSHLVGDTFHNDGSLLLQDVQKADEGIYTCEIRLKNESMVMKKPVELWVLPE-- 123
Query: 1795 RMPNALYIPEGDNTKVKIFYAGDQP---MEVSLTKNGR------------------VVQS 1833
P L + GD T+++ + +V+ + QS
Sbjct: 124 -EPRDLRVRVGDTTQMRCSIQSTEEKRVTKVNWMFSSGSHTEEETVLSYDSNMRSGKFQS 182
Query: 1834 DDRFKFTVLDDYII------IFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPP 1887
RF+ V I I ++ +++ D G YT ++ T +++
Sbjct: 183 LGRFRNRVDLTGDISRNDGSIKLQTVKESDQGIYTCSIYVGKLESRKTIVLHVVQDEFQR 242
Query: 1888 IGPLDVSEITKHTCTLHWN 1906
L+ N
Sbjct: 243 TISPTPPTDKGQQGILNGN 261
Score = 64.1 bits (155), Expect = 8e-11
Identities = 24/253 (9%), Positives = 51/253 (20%), Gaps = 60/253 (23%)
Query: 481 PEIIVPLRNANAIQNHNAQFQCTIT---GCPKPTISWLKGSREITPSARHHIFAEGDTY- 536
P + V + C + + WL + S + +
Sbjct: 6 PGLTVSSPQLRVHVGESVLMGCVVQRTEEKHVDRVDWLFSKDKDDASEYVLFYYSNLSVP 65
Query: 537 -------------------TLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFN 577
+L++ V D Y C K K + +
Sbjct: 66 TGRFQNRSHLVGDTFHNDGSLLLQDVQKADEGIYTCEIRLKNESMVMKKPVELW------ 119
Query: 578 VPPRFRDTAYFDKGENVVVKIPFTGYPKP---KITWYRDN-------------------- 614
V P G+ ++ + K+ W +
Sbjct: 120 VLPEEPRDLRVRVGDTTQMRCSIQSTEEKRVTKVNWMFSSGSHTEEETVLSYDSNMRSGK 179
Query: 615 ----EVIESGGHFHVETSERHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQISDRP 670
+ + S + ++ D Y + + +
Sbjct: 180 FQSLGRFRNRVDLTGDISRNDGSIKLQTVKESDQGIYTCSIYVGKLESRKTIVLHVVQDE 239
Query: 671 ----DPPQFPTVE 679
P PT +
Sbjct: 240 FQRTISPTPPTDK 252
Score = 44.5 bits (104), Expect = 2e-04
Identities = 14/120 (11%), Positives = 27/120 (22%), Gaps = 23/120 (19%)
Query: 2088 PEIIVPLRNANAIQNHNAQFQCTIT---GCPKPTISWLKGSREITPSARHHIFAEGDTY- 2143
P + V + C + + WL + S + +
Sbjct: 6 PGLTVSSPQLRVHVGESVLMGCVVQRTEEKHVDRVDWLFSKDKDDASEYVLFYYSNLSVP 65
Query: 2144 -------------------TLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFN 2184
+L++ V D Y C K K + + P+
Sbjct: 66 TGRFQNRSHLVGDTFHNDGSLLLQDVQKADEGIYTCEIRLKNESMVMKKPVELWVLPEEP 125
Score = 40.2 bits (93), Expect = 0.004
Identities = 12/113 (10%), Positives = 27/113 (23%), Gaps = 28/113 (24%)
Query: 2103 HNAQFQCTITGCPKP---TISWLKGSREITPSARHHIFAEGDTY---------------- 2143
Q +C+I + ++W+ S T +
Sbjct: 134 DTTQMRCSIQSTEEKRVTKVNWMFSSGSHTEEETVLSYDSNMRSGKFQSLGRFRNRVDLT 193
Query: 2144 --------TLIINSVYGVDADEYVCRAVNKGGVKSTKAEL-IIMTAPKFNVPP 2187
++ + +V D Y C L ++ + + P
Sbjct: 194 GDISRNDGSIKLQTVKESDQGIYTCSIYVGKLESRKTIVLHVVQDEFQRTISP 246
Score = 37.9 bits (87), Expect = 0.028
Identities = 29/188 (15%), Positives = 53/188 (28%), Gaps = 47/188 (25%)
Query: 1430 RDITVKAGEDFSIH---VPFMAFPQPAAFWFANDSIIDDSDT-----------------R 1469
+ V GE + W + D S+ R
Sbjct: 13 PQLRVHVGESVLMGCVVQRTEEKHVDRVDWLFSKDKDDASEYVLFYYSNLSVPTGRFQNR 72
Query: 1470 VH--KQLTMNSASLVVKNSQRSDGGQYRLQLKNPAGFDTATLHSRLRTLP---------- 1517
H N SL++++ Q++D G Y +++ L LP
Sbjct: 73 SHLVGDTFHNDGSLLLQDVQKADEGIYTCEIRLKNESMVMKKPVELWVLPEEPRDLRVRV 132
Query: 1518 -DSVNPRCHLPSSTSKERPKFPTHPNHQPWLKWARASLTSKGVDSTEDSISLVWSKPRHD 1576
D+ RC + S T + W +S + + E+++ S R
Sbjct: 133 GDTTQMRCSIQS----------TEEKRVTKVNWMFSSGSH----TEEETVLSYDSNMRSG 178
Query: 1577 GGSPIQRY 1584
+ R+
Sbjct: 179 KFQSLGRF 186
Score = 35.2 bits (80), Expect = 0.17
Identities = 29/225 (12%), Positives = 62/225 (27%), Gaps = 52/225 (23%)
Query: 1324 TAKFPFTVPDPPGQPQI-VDWDTNNATLMWDRPRTDGGSKIQGYKMLLKTPTGELP--TT 1380
+ V + VDW ++ + + D + Y L PTG +
Sbjct: 22 SVLMGCVVQRTEEKHVDRVDW-------LFSKDKDDASEYVLFYYSNLSVPTGRFQNRSH 74
Query: 1381 IWSKIRPTSSTVYCKDTTMN---------SSNSEPGKQSGPVIVEEQPNKPVMDLSGVRD 1431
+ ++ +D +E PV + P +P RD
Sbjct: 75 LVGDTFHNDGSLLLQDVQKADEGIYTCEIRLKNESMVMKKPVELWVLPEEP-------RD 127
Query: 1432 ITVKAGEDFSIHVPFMAFPQPAAF---WFANDSIIDDSDTRVHKQ--------------- 1473
+ V+ G+ + + + W + + +T +
Sbjct: 128 LRVRVGDTTQMRCSIQSTEEKRVTKVNWMFSSGSHTEEETVLSYDSNMRSGKFQSLGRFR 187
Query: 1474 --------LTMNSASLVVKNSQRSDGGQYRLQLKNPAGFDTATLH 1510
++ N S+ ++ + SD G Y + T+
Sbjct: 188 NRVDLTGDISRNDGSIKLQTVKESDQGIYTCSIYVGKLESRKTIV 232
Score = 34.1 bits (77), Expect = 0.41
Identities = 12/120 (10%), Positives = 29/120 (24%), Gaps = 26/120 (21%)
Query: 1144 RDMTVLAGEEFTITVPFSGRPKPTPI---WTVNGDEVSPDGRIKFETSENQTIYRNKSAK 1200
RD+ V G+ + + W + + + + S ++ +
Sbjct: 126 RDLRVRVGDTTQMRCSIQSTEEKRVTKVNWMFSSGSHTEEETVLSYDSNMRSGKFQSLGR 185
Query: 1201 -----------------------RATDSGSYTIQLVNTVGSDSASCKVYVVDKPSPPQGP 1237
+ +D G YT + + ++VV
Sbjct: 186 FRNRVDLTGDISRNDGSIKLQTVKESDQGIYTCSIYVGKLESRKTIVLHVVQDEFQRTIS 245
Score = 32.5 bits (73), Expect = 1.2
Identities = 17/114 (14%), Positives = 30/114 (26%), Gaps = 22/114 (19%)
Query: 1144 RDMTVLAGEEFTIT---VPFSGRPKPTPIWTVNGDEVSPDGRIKFETS------------ 1188
+ V GE + + W + D+ + F S
Sbjct: 13 PQLRVHVGESVLMGCVVQRTEEKHVDRVDWLFSKDKDDASEYVLFYYSNLSVPTGRFQNR 72
Query: 1189 ---ENQTIYRNKSAK----RATDSGSYTIQLVNTVGSDSASCKVYVVDKPSPPQ 1235
T + + S + D G YT ++ S V + P P+
Sbjct: 73 SHLVGDTFHNDGSLLLQDVQKADEGIYTCEIRLKNESMVMKKPVELWVLPEEPR 126
>2ee3_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 108
Score = 68.2 bits (167), Expect = 1e-13
Identities = 20/98 (20%), Positives = 28/98 (28%), Gaps = 11/98 (11%)
Query: 670 PDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSWIRV---GNTRFTT 726
PP+ D+ HD+ + W + V + GN
Sbjct: 8 LAPPRHLGFSDVSHDAARVFWEGA----PRPVRLVRVTYVSSEGGHSGQTEAPGNATSAM 63
Query: 727 MAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKD 764
+ LS Y RV G S T +TTK
Sbjct: 64 --LGPLSSSTTYTVRVTCLYPGGGSSTLTGR--VTTKK 97
Score = 68.2 bits (167), Expect = 1e-13
Identities = 19/112 (16%), Positives = 29/112 (25%), Gaps = 9/112 (8%)
Query: 274 TGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHD 333
P L S+++ + W V V H +
Sbjct: 4 GSSGLAPPRHLGFSDVSHDAARVFWEGAPRP----VRLVRVTYVSSEGGHSGQTEAPGNA 59
Query: 334 TTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPV 385
T+ ++ L+ Y V + G L G K PSP P
Sbjct: 60 TSAMLGPLSSSTTYTVRVTCLYPGGGSSTLTGRVTTK-----KAPSPSSGPS 106
Score = 68.2 bits (167), Expect = 1e-13
Identities = 19/112 (16%), Positives = 29/112 (25%), Gaps = 9/112 (8%)
Query: 1881 TGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHD 1940
P L S+++ + W V V H +
Sbjct: 4 GSSGLAPPRHLGFSDVSHDAARVFWEGAPRP----VRLVRVTYVSSEGGHSGQTEAPGNA 59
Query: 1941 TTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPV 1992
T+ ++ L+ Y V + G L G K PSP P
Sbjct: 60 TSAMLGPLSSSTTYTVRVTCLYPGGGSSTLTGRVTTK-----KAPSPSSGPS 106
Score = 66.7 bits (163), Expect = 4e-13
Identities = 21/108 (19%), Positives = 35/108 (32%), Gaps = 9/108 (8%)
Query: 1231 PSPPQGPLDVSDITPESCSLSWKPPLDDGGSPITNYVVEKYESATGFWSKLSSFVRSPAY 1290
P L SD++ ++ + W+ P+ V S G + + + +
Sbjct: 7 GLAPPRHLGFSDVSHDAARVFWEGAP----RPVRLVRVTYVSSEGGHSGQTEAPGNATSA 62
Query: 1291 DVFGLETNRQYRFRVRAENQYGVSEPLELDNSITAKFPFTVPDPPGQP 1338
+ L ++ Y RV G S L T K P P P
Sbjct: 63 MLGPLSSSTTYTVRVTCLYPGGGSSTLT-GRVTTKK----APSPSSGP 105
Score = 61.3 bits (149), Expect = 3e-11
Identities = 13/86 (15%), Positives = 25/86 (29%), Gaps = 4/86 (4%)
Query: 902 PHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTKVSSYVTTPFVR 961
PP +L + + D+ ++W + V + +
Sbjct: 8 LAPPRHLGFSDVSHDAARVFWEGAPRP----VRLVRVTYVSSEGGHSGQTEAPGNATSAM 63
Query: 962 VRNLAIGSTYEFRVMAENQYGLSKPA 987
+ L+ +TY RV G S
Sbjct: 64 LGPLSSSTTYTVRVTCLYPGGGSSTL 89
Score = 58.2 bits (141), Expect = 3e-10
Identities = 11/90 (12%), Positives = 22/90 (24%), Gaps = 5/90 (5%)
Query: 378 PSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQI 437
+PP + V D + W+ ++ + + +
Sbjct: 8 LAPPRHLGFSDVSHDAARVFWEGAP----RPVRLVRVTYVSSEGGHSGQTEAP-GNATSA 62
Query: 438 NIPNLIEGRQYEFRVYAQNEAGLSLPSSAS 467
+ L Y RV G S +
Sbjct: 63 MLGPLSSSTTYTVRVTCLYPGGGSSTLTGR 92
Score = 58.2 bits (141), Expect = 3e-10
Identities = 11/90 (12%), Positives = 22/90 (24%), Gaps = 5/90 (5%)
Query: 1985 PSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQI 2044
+PP + V D + W+ ++ + + +
Sbjct: 8 LAPPRHLGFSDVSHDAARVFWEGAP----RPVRLVRVTYVSSEGGHSGQTEAP-GNATSA 62
Query: 2045 NIPNLIEGRQYEFRVYAQNEAGLSLPSSAS 2074
+ L Y RV G S +
Sbjct: 63 MLGPLSSSTTYTVRVTCLYPGGGSSTLTGR 92
Score = 42.8 bits (101), Expect = 1e-04
Identities = 13/122 (10%), Positives = 23/122 (18%), Gaps = 37/122 (30%)
Query: 1002 PGAPGAPKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSL 1061
P D + D+ + W P++ V P +
Sbjct: 8 LAPPRHLGFSDVSHDAARVFWEGAP----RPVRLVRVTYVSSEGGHS---GQTEAPGNAT 60
Query: 1062 KYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPWSS 1121
+L L + Y RV + G +
Sbjct: 61 SAML------------------------------GPLSSSTTYTVRVTCLYPGGGSSTLT 90
Query: 1122 SS 1123
Sbjct: 91 GR 92
Score = 36.2 bits (84), Expect = 0.018
Identities = 7/38 (18%), Positives = 11/38 (28%), Gaps = 3/38 (7%)
Query: 46 SFSVLNLVEGNDYEFRIIAVNAIGKSEPS---ICTTPV 80
S + L Y R+ + G S + T
Sbjct: 61 SAMLGPLSSSTTYTVRVTCLYPGGGSSTLTGRVTTKKA 98
Score = 36.2 bits (84), Expect = 0.018
Identities = 7/38 (18%), Positives = 11/38 (28%), Gaps = 3/38 (7%)
Query: 1653 SFSVLNLVEGNDYEFRIIAVNAIGKSEPS---ICTTPV 1687
S + L Y R+ + G S + T
Sbjct: 61 SAMLGPLSSSTTYTVRVTCLYPGGGSSTLTGRVTTKKA 98
Score = 28.5 bits (64), Expect = 8.0
Identities = 6/52 (11%), Positives = 15/52 (28%), Gaps = 4/52 (7%)
Query: 1330 TVPDPPGQPQIVDWDTNNATLMWDRPRTDGGSKIQGYKMLLKTPTGELPTTI 1381
+ PP D + A + W+ ++ ++ + G
Sbjct: 6 SGLAPPRHLGFSDVSHDAARVFWEGAP----RPVRLVRVTYVSSEGGHSGQT 53
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding,
serine/threonine-protein kinase, transferase; 1.85A
{Giardia lamblia} PDB: 3gc0_A*
Length = 329
Score = 73.8 bits (182), Expect = 1e-13
Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 8/86 (9%)
Query: 820 DHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKE-----LIRKEIDIMNQL 874
D Y + ++G G +G V++ + T A K I + H E+E IR E+ ++ +L
Sbjct: 34 DRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEH--EEEGVPGTAIR-EVSLLKEL 90
Query: 875 HHPKLINLHDAFEDDDEMVLIFEVLD 900
H +I L + + LIFE +
Sbjct: 91 QHRNIIELKSVIHHNHRLHLIFEYAE 116
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85;
cyclin-dependent kinase, signaling protein,transfera
cycle complex; HET: MES AGS; 2.90A {Saccharomyces
cerevisiae} PDB: 2pk9_A*
Length = 317
Score = 73.4 bits (181), Expect = 1e-13
Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 820 DHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKE------LIRKEIDIMNQ 873
+ LE++G G + V++ + TG A K + L+ E IR EI +M +
Sbjct: 5 SQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEV----KLDSEEGTPSTAIR-EISLMKE 59
Query: 874 LHHPKLINLHDAFEDDDEMVLIFEVLD 900
L H ++ L+D ++++ L+FE +D
Sbjct: 60 LKHENIVRLYDVIHTENKLTLVFEFMD 86
>2edb_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer
suppressor, structural genomics, NPPSFA; NMR {Homo
sapiens}
Length = 116
Score = 68.6 bits (168), Expect = 1e-13
Identities = 25/121 (20%), Positives = 46/121 (38%), Gaps = 8/121 (6%)
Query: 1217 GSDSASCKVYVVDKPSPPQGPLDVS-DITPESCSLSWKPPLDDGGSPITNYVVEKYESAT 1275
GS +S +D+ P P + +SW PPL+ + Y++ Y +
Sbjct: 1 GSSGSSGPENDLDESQVPDQPSSLHVRPQTNCIIMSWTPPLNPNI-VVRGYIIG-YGVGS 58
Query: 1276 GFWSKLSSFVRSPAYDVFGLETNRQYRFRVRAENQYGVSEPLELDNSITAKFPFTVPDPP 1335
+ + + Y + LE++ Y ++A N G PL S T + ++ P
Sbjct: 59 PYAETVRVDSKQRYYSIERLESSSHYVISLKAFNNAGEGVPLY--ESATTR---SITSGP 113
Query: 1336 G 1336
Sbjct: 114 S 114
Score = 67.1 bits (164), Expect = 3e-13
Identities = 18/103 (17%), Positives = 33/103 (32%), Gaps = 5/103 (4%)
Query: 902 PHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTKVSSYVTTPFVR 961
P P +LH + + + WTPP + + Y++ + T +
Sbjct: 18 PDQPSSLHVRPQT-NCIIMSWTPPLNPNI-VVRGYIIGYGVGSPYAETVRVDSKQRYYS- 74
Query: 962 VRNLAIGSTYEFRVMAENQYGLSKPALTIDPIKAKHPFDVPGA 1004
+ L S Y + A N G P + + P +
Sbjct: 75 IERLESSSHYVISLKAFNNAGEGVPL--YESATTRSITSGPSS 115
Score = 65.9 bits (161), Expect = 9e-13
Identities = 19/97 (19%), Positives = 33/97 (34%), Gaps = 4/97 (4%)
Query: 667 SDRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSWIRVGNTRFTT 726
S PD P V + + + W P+ + + YI+ + +++
Sbjct: 15 SQVPDQPSSLHVRP-QTNCIIMSWTPPL-NPNIVVRGYIIGYGVGSPYAETVRVDSKQRY 72
Query: 727 MAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTK 763
+I L Y + A N G P S TT+
Sbjct: 73 YSIERLESSSHYVISLKAFNNAGEGVPLYES--ATTR 107
Score = 65.5 bits (160), Expect = 1e-12
Identities = 19/106 (17%), Positives = 33/106 (31%), Gaps = 6/106 (5%)
Query: 274 TGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHD 333
+ +P P + + W PP V Y++ P+ +
Sbjct: 15 SQVPDQPSSL--HVRPQTNCIIMSWTPPLNPNI-VVRGYIIGYGV-GSPYAETVRVDSKQ 70
Query: 334 TTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPS 379
+ ++ L Y+ + A N G G PL +S PS
Sbjct: 71 RYYSIERLESSSHYVISLKAFNNAGEGVPLY--ESATTRSITSGPS 114
Score = 65.5 bits (160), Expect = 1e-12
Identities = 19/106 (17%), Positives = 33/106 (31%), Gaps = 6/106 (5%)
Query: 1881 TGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHD 1940
+ +P P + + W PP V Y++ P+ +
Sbjct: 15 SQVPDQPSSL--HVRPQTNCIIMSWTPPLNPNI-VVRGYIIGYGV-GSPYAETVRVDSKQ 70
Query: 1941 TTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPS 1986
+ ++ L Y+ + A N G G PL +S PS
Sbjct: 71 RYYSIERLESSSHYVISLKAFNNAGEGVPLY--ESATTRSITSGPS 114
Score = 62.8 bits (153), Expect = 1e-11
Identities = 27/112 (24%), Positives = 38/112 (33%), Gaps = 11/112 (9%)
Query: 358 GMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKH 417
G P P P V + + +SW PL+ ++GY I +
Sbjct: 1 GSSGSSG---PENDLDESQVPDQPSSLHVR-PQTNCIIMSWTPPLNPNI-VVRGYII-GY 54
Query: 418 EVGSDAWQRVNVAICAPSQ--INIPNLIEGRQYEFRVYAQNEAGLSLPSSAS 467
VGS + V V Q +I L Y + A N AG +P S
Sbjct: 55 GVGSPYAETVRVD---SKQRYYSIERLESSSHYVISLKAFNNAGEGVPLYES 103
Score = 62.8 bits (153), Expect = 1e-11
Identities = 27/112 (24%), Positives = 38/112 (33%), Gaps = 11/112 (9%)
Query: 1965 GMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKH 2024
G P P P V + + +SW PL+ ++GY I +
Sbjct: 1 GSSGSSG---PENDLDESQVPDQPSSLHVR-PQTNCIIMSWTPPLNPNI-VVRGYII-GY 54
Query: 2025 EVGSDAWQRVNVAICAPSQ--INIPNLIEGRQYEFRVYAQNEAGLSLPSSAS 2074
VGS + V V Q +I L Y + A N AG +P S
Sbjct: 55 GVGSPYAETVRVD---SKQRYYSIERLESSSHYVISLKAFNNAGEGVPLYES 103
Score = 55.9 bits (135), Expect = 3e-09
Identities = 21/133 (15%), Positives = 35/133 (26%), Gaps = 36/133 (27%)
Query: 991 DPIKAKHPFDVPGAPGAPKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIK 1050
P VP P + V + I + W+ P + ++ YI+ + S
Sbjct: 7 GPENDLDESQVPDQPSSLH-VRPQTNCIIMSWTPPLNPNI-VVRGYIIGYGVGSPY---- 60
Query: 1051 ASMAHIPDTSLKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCA 1110
A + Y + L + Y + A
Sbjct: 61 AETVRVDSKQRYYSI------------------------------ERLESSSHYVISLKA 90
Query: 1111 VNAAGQGPWSSSS 1123
N AG+G S
Sbjct: 91 FNNAGEGVPLYES 103
Score = 38.6 bits (90), Expect = 0.003
Identities = 14/131 (10%), Positives = 32/131 (24%), Gaps = 50/131 (38%)
Query: 1559 VDSTEDSISLVWSKPRHDGGSPIQRYIVE-KRLISDDKWIKASMAHIPDTSLKYVLWVSE 1617
V + I + W+ P + ++ YI+ + ++
Sbjct: 26 VRPQTNCIIMSWTPPLNPNI-VVRGYIIGYGVGSPYAETVRVD----------------- 67
Query: 1618 GKSIGSERGSTAQFLEREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGK 1677
+R +S+ L + Y + A N G+
Sbjct: 68 ----SKQR---------------------------YYSIERLESSSHYVISLKAFNNAGE 96
Query: 1678 SEPSICTTPVK 1688
P + +
Sbjct: 97 GVPLYESATTR 107
Score = 33.9 bits (78), Expect = 0.14
Identities = 11/60 (18%), Positives = 18/60 (30%), Gaps = 2/60 (3%)
Query: 22 YIIERREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPSICTTPVK 81
YII D +S+ L + Y + A N G+ P + +
Sbjct: 50 YIIGYGVGSPYAETVRVDSKQR--YYSIERLESSSHYVISLKAFNNAGEGVPLYESATTR 107
>3lqm_A Interleukin-10 receptor subunit beta; IL-10R2, common chain,
cytokine, IL-10, IL-22, IL- 28, IL-29, disulfide bond,
glycoprotein, membrane; 2.14A {Homo sapiens}
Length = 201
Score = 70.9 bits (173), Expect = 1e-13
Identities = 29/209 (13%), Positives = 58/209 (27%), Gaps = 23/209 (11%)
Query: 283 PLDVS-EITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHDTTFIVQGL 341
P +V L W P + G + + + C+ TT T L
Sbjct: 5 PENVRMNSVNFKNILQWESPAFAKG--QLTFTAQYLSYRIFQDKCMQTT--LTECDFSSL 60
Query: 342 TEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKP 401
++ ++ V A + ++ SP D + +V D +++ + P
Sbjct: 61 SKYGDHTLRVRAEFADEHSDWVQ-----ITFSPVDDTIIGPPGMQVEVLADCLHMRFLAP 115
Query: 402 LDDGGSRIQ---------GYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRV 452
+ Y + + G+D ++ + NL Y +V
Sbjct: 116 KIENEYETWTMKNVYNSWTYNVQYWKQGTDEKFQITP---QYDFEVLRNLEPWTTYCVQV 172
Query: 453 YAQNEAGLSLPSSASNSVQIKDPMAAKAP 481
+ S V + P
Sbjct: 173 RGFLP-DRNKAGEWSEPVCEQTTHDETVP 200
Score = 70.9 bits (173), Expect = 1e-13
Identities = 29/209 (13%), Positives = 58/209 (27%), Gaps = 23/209 (11%)
Query: 1890 PLDVS-EITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHDTTFIVQGL 1948
P +V L W P + G + + + C+ TT T L
Sbjct: 5 PENVRMNSVNFKNILQWESPAFAKG--QLTFTAQYLSYRIFQDKCMQTT--LTECDFSSL 60
Query: 1949 TEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKP 2008
++ ++ V A + ++ SP D + +V D +++ + P
Sbjct: 61 SKYGDHTLRVRAEFADEHSDWVQ-----ITFSPVDDTIIGPPGMQVEVLADCLHMRFLAP 115
Query: 2009 LDDGGSRIQ---------GYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRV 2059
+ Y + + G+D ++ + NL Y +V
Sbjct: 116 KIENEYETWTMKNVYNSWTYNVQYWKQGTDEKFQITP---QYDFEVLRNLEPWTTYCVQV 172
Query: 2060 YAQNEAGLSLPSSASNSVQIKDPMAAKAP 2088
+ S V + P
Sbjct: 173 RGFLP-DRNKAGEWSEPVCEQTTHDETVP 200
Score = 60.9 bits (147), Expect = 3e-10
Identities = 31/220 (14%), Positives = 53/220 (24%), Gaps = 38/220 (17%)
Query: 904 PPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTKVSSYVTTPFVRVR 963
PPEN+ + L W P G + + Y + T
Sbjct: 4 PPENVRMNSV-NFKNILQWESPAFAKGQ--LTFTAQYLSYRI--FQDKCMQTTLTECDFS 58
Query: 964 NLAIGSTYEFRVMAENQYGLSKPALTIDPIKAKHPFDVPGAPGAPKGVDSTEDSISLVWS 1023
+L+ + RV AE S PG V+ D + + +
Sbjct: 59 SLSKYGDHTLRVRAEFADEHSDWVQITFSPVDDTIIGPPGMQ-----VEVLADCLHMRFL 113
Query: 1024 KPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEGKSIGSERGSTAQF 1083
P+ + S Y + + + + +
Sbjct: 114 APKIENEYETWTM------------------KNVYNSWTYNVQYWKQGTDEKFQITPQYD 155
Query: 1084 LELLLMFIPNRVTSLIENHEYEFRVCAVNAA--GQGPWSS 1121
E+L +L Y +V G WS
Sbjct: 156 FEVL--------RNLEPWTTYCVQVRGFLPDRNKAGEWSE 187
Score = 46.7 bits (110), Expect = 2e-05
Identities = 27/161 (16%), Positives = 47/161 (29%), Gaps = 13/161 (8%)
Query: 1250 LSWKPPLDDGGSPITNYVVEKYESATGFWSKLSSFVRSPAYDVFGLETNRQYRFRVRAEN 1309
L W+ P G + + Y S F K D L + RVRAE
Sbjct: 19 LQWESPAFAKGQ--LTFTAQ-YLSYRIFQDKCMQ-TTLTECDFSSLSKYGDHTLRVRAEF 74
Query: 1310 QYGVSEPLELDNSITAKFPFTVPDPPGQPQI-VDWDTNNATLMWDRPRTDGGSKIQGYKM 1368
S+ + F G P + V+ + + + P+ + + K
Sbjct: 75 ADEHSDW------VQITFSPVDDTIIGPPGMQVEVLADCLHMRFLAPKIENEYETWTMKN 128
Query: 1369 LLKTPTGELPTTIWSKIRPTSSTVYCKDTTMNSSNSEPGKQ 1409
+ + T + W + + + N EP
Sbjct: 129 VYNSWTYNV--QYWKQGTDEKFQITPQYDFEVLRNLEPWTT 167
Score = 44.0 bits (103), Expect = 2e-04
Identities = 16/86 (18%), Positives = 30/86 (34%), Gaps = 4/86 (4%)
Query: 672 PPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSWIRVGNTRFTTMAITG 731
PP+ + + + L W +P + G + + + + + T T +
Sbjct: 4 PPENVRMNSV-NFKNILQWESPAFAKGQ--LTFTAQYLSYRIFQD-KCMQTTLTECDFSS 59
Query: 732 LSPGHQYEFRVYAENVYGRSDPSTTS 757
LS + RV AE SD +
Sbjct: 60 LSKYGDHTLRVRAEFADEHSDWVQIT 85
Score = 42.8 bits (100), Expect = 5e-04
Identities = 20/130 (15%), Positives = 37/130 (28%), Gaps = 13/130 (10%)
Query: 647 YRVVAENDLGMDSAIVKIQISDRPDPPQFPTVEDIGH-DSLALVWRAPIWDGGS------ 699
RV AE + P ++ D L + + AP +
Sbjct: 68 LRVRAEFADEHSDWVQITFSPVDDTIIGPPGMQVEVLADCLHMRFLAPKIENEYETWTMK 127
Query: 700 ---NITNYIVEKREHPMSSWIRVGNTRFTTMAITGLSPGHQYEFRV--YAENVYGRSDPS 754
N Y V+ + ++ ++ + L P Y +V + + + S
Sbjct: 128 NVYNSWTYNVQYWKQGTDEKFQI-TPQYDFEVLRNLEPWTTYCVQVRGFLPDRNKAGEWS 186
Query: 755 TTSDLITTKD 764
TT D
Sbjct: 187 EPVCEQTTHD 196
Score = 34.7 bits (79), Expect = 0.22
Identities = 16/115 (13%), Positives = 30/115 (26%), Gaps = 14/115 (12%)
Query: 256 VNLSNSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTH---- 311
S V TF+ + GPP ++V + + PK + +
Sbjct: 73 EFADEHSDWVQITFSPVDDTIIGPPGMQVEVLA---DCLHMRFLAPKIENEYETWTMKNV 129
Query: 312 -----YVVERRDISMPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGP 361
Y V+ I+ +++ L Y V +
Sbjct: 130 YNSWTYNVQYWKQGTDEKFQITPQ--YDFEVLRNLEPWTTYCVQVRGFLPDRNKA 182
Score = 34.7 bits (79), Expect = 0.22
Identities = 16/115 (13%), Positives = 30/115 (26%), Gaps = 14/115 (12%)
Query: 1863 VNLSNSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTH---- 1918
S V TF+ + GPP ++V + + PK + +
Sbjct: 73 EFADEHSDWVQITFSPVDDTIIGPPGMQVEVLA---DCLHMRFLAPKIENEYETWTMKNV 129
Query: 1919 -----YVVERRDISMPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGP 1968
Y V+ I+ +++ L Y V +
Sbjct: 130 YNSWTYNVQYWKQGTDEKFQITPQ--YDFEVLRNLEPWTTYCVQVRGFLPDRNKA 182
>3s98_A Interferon alpha/beta receptor 1; human, type I interferons,
receptor chain, ifnar1, fibronect III, type I interferon
receptor chain; HET: NAG; 1.90A {Homo sapiens}
Length = 306
Score = 73.4 bits (179), Expect = 1e-13
Identities = 34/216 (15%), Positives = 59/216 (27%), Gaps = 16/216 (7%)
Query: 261 SSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTH-----YVVE 315
SS +FT GPP L+ + +H +P D + Y +
Sbjct: 86 SSWYEVDSFTPFRKAQIGPPEVHLEAED---KAIVIHISPGTKDSVMWALDGLSFTYSLV 142
Query: 316 RRDISMPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPY 375
S I + + L+ Y V A K+
Sbjct: 143 IWKNSSGVEERIENI--YSRHKIYKLSPETTYCLKVKAALLTSWKIG-VYSPVHCIKTTV 199
Query: 376 DKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQ---GYWIDKHEVGSDAWQRVNVA-- 430
+ PP + V L WD + ++Q + W+++
Sbjct: 200 ENELPPPENIEVSVQNQNYVLKWDYTYANMTFQVQWLHAFLKRNPGNHLYKWKQIPDCEN 259
Query: 431 ICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSA 466
+ + N+ + Y RV A + S S
Sbjct: 260 VKTTQCVFPQNVFQKGIYLLRVQASDGNNTSFWSEE 295
Score = 73.4 bits (179), Expect = 1e-13
Identities = 34/216 (15%), Positives = 59/216 (27%), Gaps = 16/216 (7%)
Query: 1868 SSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTH-----YVVE 1922
SS +FT GPP L+ + +H +P D + Y +
Sbjct: 86 SSWYEVDSFTPFRKAQIGPPEVHLEAED---KAIVIHISPGTKDSVMWALDGLSFTYSLV 142
Query: 1923 RRDISMPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPY 1982
S I + + L+ Y V A K+
Sbjct: 143 IWKNSSGVEERIENI--YSRHKIYKLSPETTYCLKVKAALLTSWKIG-VYSPVHCIKTTV 199
Query: 1983 DKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQ---GYWIDKHEVGSDAWQRVNVA-- 2037
+ PP + V L WD + ++Q + W+++
Sbjct: 200 ENELPPPENIEVSVQNQNYVLKWDYTYANMTFQVQWLHAFLKRNPGNHLYKWKQIPDCEN 259
Query: 2038 ICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSA 2073
+ + N+ + Y RV A + S S
Sbjct: 260 VKTTQCVFPQNVFQKGIYLLRVQASDGNNTSFWSEE 295
Score = 71.5 bits (174), Expect = 4e-13
Identities = 36/223 (16%), Positives = 63/223 (28%), Gaps = 22/223 (9%)
Query: 283 PLDVS-EITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWI----CISTTCHDTTFI 337
P V +I L WN G + + + M +WI C + T F
Sbjct: 7 PQKVEVDIIDDNFILRWNRSDESVGN--VTFSFDYQKTGMDNWIKLSGCQNITSTKCNFS 64
Query: 338 VQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLS 397
L +E + A EN + + +P+ K V + + +
Sbjct: 65 SLKLNVYEEIKLRIRAEKENTSSW-----YEVDSFTPFRKAQIGPPEVHLEAEDKAIVIH 119
Query: 398 WDKPLDDGGSR-----IQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRV 452
D Y + + S +R+ S+ I L Y +V
Sbjct: 120 ISPGTKDSVMWALDGLSFTYSLVIWKNSSGVEERIEN---IYSRHKIYKLSPETTYCLKV 176
Query: 453 YAQNEAG--LSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAI 493
A + + S + I V ++N N +
Sbjct: 177 KAALLTSWKIGVYSPVHCIKTTVENELPPPENIEVSVQNQNYV 219
Score = 71.5 bits (174), Expect = 4e-13
Identities = 36/223 (16%), Positives = 63/223 (28%), Gaps = 22/223 (9%)
Query: 1890 PLDVS-EITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWI----CISTTCHDTTFI 1944
P V +I L WN G + + + M +WI C + T F
Sbjct: 7 PQKVEVDIIDDNFILRWNRSDESVGN--VTFSFDYQKTGMDNWIKLSGCQNITSTKCNFS 64
Query: 1945 VQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLS 2004
L +E + A EN + + +P+ K V + + +
Sbjct: 65 SLKLNVYEEIKLRIRAEKENTSSW-----YEVDSFTPFRKAQIGPPEVHLEAEDKAIVIH 119
Query: 2005 WDKPLDDGGSR-----IQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRV 2059
D Y + + S +R+ S+ I L Y +V
Sbjct: 120 ISPGTKDSVMWALDGLSFTYSLVIWKNSSGVEERIEN---IYSRHKIYKLSPETTYCLKV 176
Query: 2060 YAQNEAG--LSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAI 2100
A + + S + I V ++N N +
Sbjct: 177 KAALLTSWKIGVYSPVHCIKTTVENELPPPENIEVSVQNQNYV 219
Score = 69.6 bits (169), Expect = 2e-12
Identities = 24/216 (11%), Positives = 53/216 (24%), Gaps = 41/216 (18%)
Query: 915 GDSLTLYWTPPRDNGGSEITN-----YVVEKKDYNSTVWTKVSSYVTTPFVRVRNLAIGS 969
++ ++ +P + + Y + +S V ++ ++ L+ +
Sbjct: 113 DKAIVIHISPGTKDSVMWALDGLSFTYSLVIWKNSSGVEERIE--NIYSRHKIYKLSPET 170
Query: 970 TYEFRVMAENQYGLSKPALTIDPIKAKHPFDVPGAPGAPKGVDSTEDSISLVWSKPRHDG 1029
TY +V A + K + P V + L W +
Sbjct: 171 TYCLKVKAALLTSWKIGVYS-PVHCIKTTVENELPPPENIEVSVQNQNYVLKWDYTYANM 229
Query: 1030 GSPIQ---RYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEGKSIGSERGSTAQFLEL 1086
+Q ++ KW + T+
Sbjct: 230 TFQVQWLHAFLKRNPGNHLYKWKQIPDCENVKTTQCVF---------------------- 267
Query: 1087 LLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPWSSS 1122
++ + Y RV A + WS
Sbjct: 268 --------PQNVFQKGIYLLRVQASDGNNTSFWSEE 295
Score = 69.6 bits (169), Expect = 2e-12
Identities = 44/324 (13%), Positives = 92/324 (28%), Gaps = 57/324 (17%)
Query: 1011 VDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEG 1070
VD +D+ L W++ G+ + + + D WIK +S
Sbjct: 12 VDIIDDNFILRWNRSDESVGN--VTFSFDYQKTGMDNWIK----------------LSGC 53
Query: 1071 KSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPWSSSSDIIMCCA 1130
++I S L E + R+ A + S A
Sbjct: 54 QNITS-------------TKCNFSSLKLNVYEEIKLRIRAEKENTSSWYEVDSFTPFRKA 100
Query: 1131 PPCAPKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSEN 1190
P++ L E+ I + S K + +W ++G + I +S
Sbjct: 101 QIGPPEVH----------LEAEDKAIVIHISPGTKDSVMWALDGLSFTYSLVIWKNSSGV 150
Query: 1191 QTIYRNKSAKRATD----SGSYTIQ------LVNTVGSDSASCKVYVVDKPSPPQGPLDV 1240
+ N ++ +Y ++ +G S + + P
Sbjct: 151 EERIENIYSRHKIYKLSPETTYCLKVKAALLTSWKIGVYSPVHCIKTTVENELPPPENIE 210
Query: 1241 SDITPESCSLSWKPPLDDGGSPI---TNYVVEKYESATGFWSKLSS--FVRSPAYDVF-G 1294
+ ++ L W + + ++ + W ++ V++
Sbjct: 211 VSVQNQNYVLKWDYTYANMTFQVQWLHAFLKRNPGNHLYKWKQIPDCENVKTTQCVFPQN 270
Query: 1295 LETNRQYRFRVRAENQYGVSEPLE 1318
+ Y RV+A + S E
Sbjct: 271 VFQKGIYLLRVQASDGNNTSFWSE 294
Score = 67.6 bits (164), Expect = 8e-12
Identities = 33/252 (13%), Positives = 68/252 (26%), Gaps = 44/252 (17%)
Query: 904 PPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTKVSSY----VTTPF 959
P+ + + D+ L W ++ G+ + + + W K+S T
Sbjct: 6 SPQKVEV-DIIDDNFILRWNRSDESVGN--VTFSFDYQKTGMDNWIKLSGCQNITSTKCN 62
Query: 960 VRVRNLAIGSTYEFRVMAENQYGLSKPALTIDPIKAKHPFDVPGAPGAPKGVDSTEDSIS 1019
L + + R+ AE + S P +++ + +I
Sbjct: 63 FSSLKLNVYEEIKLRIRAEKE-NTSSWYEVDSFT---PFRKAQIGPPEVH-LEAEDKAIV 117
Query: 1020 LVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEGKSIGSERGS 1079
+ S D + S Y L + + S ER
Sbjct: 118 IHISPGTKDSVMWALDGL----------------------SFTYSLVIWKNSSGVEERIE 155
Query: 1080 TAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAG--QGPWSSSSDIIMCCAPPCAPKI 1137
+++ L Y +V A G +S I P
Sbjct: 156 NIYS--------RHKIYKLSPETTYCLKVKAALLTSWKIGVYSPVHCIKTTVENELPPPE 207
Query: 1138 TSDLSIRDMTVL 1149
++S+++ +
Sbjct: 208 NIEVSVQNQNYV 219
Score = 56.1 bits (134), Expect = 5e-08
Identities = 27/232 (11%), Positives = 62/232 (26%), Gaps = 24/232 (10%)
Query: 554 RAVNKGGVKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRD 613
RA + + + PP A + + +V+ + K + W D
Sbjct: 79 RAEKENTSSWYEVDSFTPFRKAQIGPPEVHLEA---EDKAIVIH--ISPGTKDSVMWALD 133
Query: 614 NEVIESGGHFHVETSERHAILTIRDASNVDT-----APYRVVAE------NDLGMDSAIV 662
+S + + + Y + + +G+ S +
Sbjct: 134 GLSFTYSLVIWKNSSGVEERIENIYSRHKIYKLSPETTYCLKVKAALLTSWKIGVYSPVH 193
Query: 663 KIQI-SDRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNI---TNYIVEKREHPMSSWIR 718
I+ + PP + + + L W + + ++ + + W +
Sbjct: 194 CIKTTVENELPPPENIEVSVQNQNYVLKWDYTYANMTFQVQWLHAFLKRNPGNHLYKWKQ 253
Query: 719 VGNTRFTT----MAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKDTF 766
+ + + + Y RV A + S S T F
Sbjct: 254 IPDCENVKTTQCVFPQNVFQKGIYLLRVQASDGNNTSFWSEEIKFDTEIQAF 305
Score = 46.8 bits (110), Expect = 5e-05
Identities = 18/112 (16%), Positives = 29/112 (25%), Gaps = 8/112 (7%)
Query: 260 NSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKV---THYVVER 316
G S I T P + L W+ + +V ++
Sbjct: 184 WKIGVYSPVHCIKTTVENELPPPENIEVSVQNQNYVLKWDYTYANMTFQVQWLHAFLKRN 243
Query: 317 RDISMPHWICISTTCHDTT----FIVQGLTEGQEYLFHVMAVNENGMGPPLE 364
+ W I C + Q + + YL V A + N E
Sbjct: 244 PGNHLYKWKQIPD-CENVKTTQCVFPQNVFQKGIYLLRVQASDGNNTSFWSE 294
Score = 46.8 bits (110), Expect = 5e-05
Identities = 18/112 (16%), Positives = 29/112 (25%), Gaps = 8/112 (7%)
Query: 1867 NSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKV---THYVVER 1923
G S I T P + L W+ + +V ++
Sbjct: 184 WKIGVYSPVHCIKTTVENELPPPENIEVSVQNQNYVLKWDYTYANMTFQVQWLHAFLKRN 243
Query: 1924 RDISMPHWICISTTCHDTT----FIVQGLTEGQEYLFHVMAVNENGMGPPLE 1971
+ W I C + Q + + YL V A + N E
Sbjct: 244 PGNHLYKWKQIPD-CENVKTTQCVFPQNVFQKGIYLLRVQASDGNNTSFWSE 294
Score = 46.8 bits (110), Expect = 5e-05
Identities = 16/103 (15%), Positives = 31/103 (30%), Gaps = 6/103 (5%)
Query: 891 EMVLIFEVLDRPHPPENLHADEFAGDSLTLYWTPPRDNGGSEI---TNYVVEKKDYNSTV 947
+ I ++ PP + L W N ++ ++ +
Sbjct: 191 PVHCIKTTVENELPPPENIEVSVQNQNYVLKWDYTYANMTFQVQWLHAFLKRNPGNHLYK 250
Query: 948 WTKVSS---YVTTPFVRVRNLAIGSTYEFRVMAENQYGLSKPA 987
W ++ TT V +N+ Y RV A + S +
Sbjct: 251 WKQIPDCENVKTTQCVFPQNVFQKGIYLLRVQASDGNNTSFWS 293
Score = 46.1 bits (108), Expect = 8e-05
Identities = 17/108 (15%), Positives = 31/108 (28%), Gaps = 7/108 (6%)
Query: 648 RVVAENDLGMDSAIVKIQISDRPDPPQFPTVEDIGH-DSLALVWRAP-----IWDGGSNI 701
R+ AE + V R P V ++ + +W
Sbjct: 77 RIRAEKENTSSWYEVDSFTPFRKAQIGPPEVHLEAEDKAIVIHISPGTKDSVMWALDGLS 136
Query: 702 TNYIVEKREHPMSSWIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYG 749
Y + ++ R+ ++ I LSP Y +V A +
Sbjct: 137 FTYSLVIWKNSSGVEERI-ENIYSRHKIYKLSPETTYCLKVKAALLTS 183
Score = 43.4 bits (101), Expect = 6e-04
Identities = 27/170 (15%), Positives = 52/170 (30%), Gaps = 15/170 (8%)
Query: 1230 KPSPPQGPLDVS-DITPESCSLSWKPPLDDGGSPITNYVVEKYESATGFWSKLSSFVRSP 1288
P P V DI ++ L W + G+ + + ++ W KLS
Sbjct: 2 DPLKS--PQKVEVDIIDDNFILRWNRSDESVGN--VTFSFDYQKTGMDNWIKLSGCQNIT 57
Query: 1289 A----YDVFGLETNRQYRFRVRAENQYGVSEPLELDNSITAKFPFTVPDPPGQPQIVDWD 1344
+ + L + + R+RAE + S E+D+ F PP ++ +
Sbjct: 58 STKCNFSSLKLNVYEEIKLRIRAEKE-NTSSWYEVDSFTP--FRKAQIGPPEVH--LEAE 112
Query: 1345 TNNATLMWDRPRTDGGS-KIQGYKMLLKTPTGELPTTIWSKIRPTSSTVY 1393
+ D + G + + + +I S
Sbjct: 113 DKAIVIHISPGTKDSVMWALDGLSFTYSLVIWKNSSGVEERIENIYSRHK 162
Score = 42.2 bits (98), Expect = 0.001
Identities = 17/104 (16%), Positives = 36/104 (34%), Gaps = 9/104 (8%)
Query: 667 SDRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSWIRVGNTRFTT 726
+D PQ V+ I + + L W G+ + + ++ M +WI++ + T
Sbjct: 1 ADPLKSPQKVEVDIIDDNFI-LRWNRSDESVGN--VTFSFDYQKTGMDNWIKLSGCQNIT 57
Query: 727 -----MAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKDT 765
+ L+ + + R+ AE S +
Sbjct: 58 STKCNFSSLKLNVYEEIKLRIRAEK-ENTSSWYEVDSFTPFRKA 100
Score = 39.1 bits (90), Expect = 0.013
Identities = 13/60 (21%), Positives = 24/60 (40%), Gaps = 4/60 (6%)
Query: 22 YIIERREVGGAIWLK---CNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPSICTT 78
+ + ++ G W+K C + +C+FS L L + + RI A S +
Sbjct: 35 FSFDYQKTGMDNWIKLSGCQNITSTKCNFSSLKLNVYEEIKLRIRAEKE-NTSSWYEVDS 93
Score = 37.6 bits (86), Expect = 0.038
Identities = 15/126 (11%), Positives = 27/126 (21%), Gaps = 46/126 (36%)
Query: 1559 VDSTEDSISLVWSKPRHDGGSPIQ---RYIVEKRLISDDKWIKASMAHIPDTSLKYVLWV 1615
V + L W + +Q ++ KW +
Sbjct: 211 VSVQNQNYVLKWDYTYANMTFQVQWLHAFLKRNPGNHLYKWKQIP--------------- 255
Query: 1616 SEGKSIGSERGSTAQFLEREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAI 1675
C + +C F N+ + Y R+ A +
Sbjct: 256 ---------------------------DCENVKTTQCVFPQ-NVFQKGIYLLRVQASDGN 287
Query: 1676 GKSEPS 1681
S S
Sbjct: 288 NTSFWS 293
Score = 36.8 bits (84), Expect = 0.072
Identities = 10/56 (17%), Positives = 19/56 (33%), Gaps = 4/56 (7%)
Query: 22 YIIERREVGGAIWLK---CNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPS 74
++ W + C + +C F N+ + Y R+ A + S S
Sbjct: 239 FLKRNPGNHLYKWKQIPDCENVKTTQCVFPQ-NVFQKGIYLLRVQASDGNNTSFWS 293
Score = 34.1 bits (77), Expect = 0.48
Identities = 21/127 (16%), Positives = 35/127 (27%), Gaps = 45/127 (35%)
Query: 1559 VDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEG 1618
VD +D+ L W++ G+ + + + D WIK S
Sbjct: 12 VDIIDDNFILRWNRSDESVGN--VTFSFDYQKTGMDNWIKLS------------------ 51
Query: 1619 KSIGSERGSTAQFLEREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKS 1678
C + +C+FS L L + + RI A S
Sbjct: 52 ------------------------GCQNITSTKCNFSSLKLNVYEEIKLRIRAEKE-NTS 86
Query: 1679 EPSICTT 1685
+
Sbjct: 87 SWYEVDS 93
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK,
STK18, PSI, structural genomics, protein structure
initiative; HET: ANP; 2.25A {Homo sapiens}
Length = 278
Score = 72.6 bits (179), Expect = 1e-13
Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 5/82 (6%)
Query: 820 DHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIP----VSHNLEKELIRKEIDIMNQLH 875
+ + + +G G+F V+R TG A K I + + + E+ I QL
Sbjct: 11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQN-EVKIHCQLK 69
Query: 876 HPKLINLHDAFEDDDEMVLIFE 897
HP ++ L++ FED + + L+ E
Sbjct: 70 HPSILELYNYFEDSNYVYLVLE 91
>2ekj_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 105
Score = 67.9 bits (166), Expect = 1e-13
Identities = 18/95 (18%), Positives = 31/95 (32%), Gaps = 8/95 (8%)
Query: 666 ISDRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSW---IRVGNT 722
S PP + DSL + W P + +Y + + V
Sbjct: 4 GSSGRSPPSNLALASETPDSLQVSWTPP----LGRVLHYWLTYAPASGLGPEKSVSVPGA 59
Query: 723 RFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTS 757
R + + + L +Y V A GRS+ + +
Sbjct: 60 R-SHVTLPDLQAATKYRVLVSAIYAAGRSEAVSAT 93
Score = 62.5 bits (152), Expect = 9e-12
Identities = 25/90 (27%), Positives = 38/90 (42%), Gaps = 8/90 (8%)
Query: 1231 PSPPQGPLDVSDITPESCSLSWKPPLDDGGSPITNYVVEKYESATGFWSKLSSFVRSPA- 1289
SPP L ++ TP+S +SW PP + +Y + Y A+G + S V
Sbjct: 8 RSPPSN-LALASETPDSLQVSWTPP----LGRVLHYWLT-YAPASGLGPEKSVSVPGARS 61
Query: 1290 -YDVFGLETNRQYRFRVRAENQYGVSEPLE 1318
+ L+ +YR V A G SE +
Sbjct: 62 HVTLPDLQAATKYRVLVSAIYAAGRSEAVS 91
Score = 61.3 bits (149), Expect = 3e-11
Identities = 18/95 (18%), Positives = 31/95 (32%), Gaps = 6/95 (6%)
Query: 273 ITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWI-CISTTC 331
+ PP L ++ T + + W PP G +V HY + S +S
Sbjct: 4 GSSGRSPPSN-LALASETPDSLQVSWTPP--LG--RVLHYWLTYAPASGLGPEKSVSVPG 58
Query: 332 HDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGI 366
+ + L +Y V A+ G +
Sbjct: 59 ARSHVTLPDLQAATKYRVLVSAIYAAGRSEAVSAT 93
Score = 61.3 bits (149), Expect = 3e-11
Identities = 18/95 (18%), Positives = 31/95 (32%), Gaps = 6/95 (6%)
Query: 1880 ITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWI-CISTTC 1938
+ PP L ++ T + + W PP G +V HY + S +S
Sbjct: 4 GSSGRSPPSN-LALASETPDSLQVSWTPP--LG--RVLHYWLTYAPASGLGPEKSVSVPG 58
Query: 1939 HDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGI 1973
+ + L +Y V A+ G +
Sbjct: 59 ARSHVTLPDLQAATKYRVLVSAIYAAGRSEAVSAT 93
Score = 60.9 bits (148), Expect = 4e-11
Identities = 22/90 (24%), Positives = 34/90 (37%), Gaps = 4/90 (4%)
Query: 378 PSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQI 437
SPP + D + +SW P R+ YW+ ++ A S +
Sbjct: 8 RSPPSNLALASETPDSLQVSWTPP----LGRVLHYWLTYAPASGLGPEKSVSVPGARSHV 63
Query: 438 NIPNLIEGRQYEFRVYAQNEAGLSLPSSAS 467
+P+L +Y V A AG S SA+
Sbjct: 64 TLPDLQAATKYRVLVSAIYAAGRSEAVSAT 93
Score = 60.9 bits (148), Expect = 4e-11
Identities = 22/90 (24%), Positives = 34/90 (37%), Gaps = 4/90 (4%)
Query: 1985 PSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQI 2044
SPP + D + +SW P R+ YW+ ++ A S +
Sbjct: 8 RSPPSNLALASETPDSLQVSWTPP----LGRVLHYWLTYAPASGLGPEKSVSVPGARSHV 63
Query: 2045 NIPNLIEGRQYEFRVYAQNEAGLSLPSSAS 2074
+P+L +Y V A AG S SA+
Sbjct: 64 TLPDLQAATKYRVLVSAIYAAGRSEAVSAT 93
Score = 59.4 bits (144), Expect = 1e-10
Identities = 21/92 (22%), Positives = 31/92 (33%), Gaps = 9/92 (9%)
Query: 902 PHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTK---VSSYVTTP 958
PP NL DSL + WTPP + +Y + + K V +
Sbjct: 8 RSPPSNLALASETPDSLQVSWTPPLGR----VLHYWLTYAPASGLGPEKSVSVPGARSH- 62
Query: 959 FVRVRNLAIGSTYEFRVMAENQYGLSKPALTI 990
V + +L + Y V A G S+
Sbjct: 63 -VTLPDLQAATKYRVLVSAIYAAGRSEAVSAT 93
Score = 47.1 bits (112), Expect = 2e-06
Identities = 19/136 (13%), Positives = 35/136 (25%), Gaps = 39/136 (28%)
Query: 1000 DVPGAPGAPKGV---DSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHI 1056
P + T DS+ + W+ P + Y + S K+
Sbjct: 3 SGSSGRSPPSNLALASETPDSLQVSWTPPL----GRVLHYWLTYAPASGLGPEKSVSVPG 58
Query: 1057 PDTSLKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQ 1116
+ + + L +Y V A+ AAG+
Sbjct: 59 ARSHV--------------------------------TLPDLQAATKYRVLVSAIYAAGR 86
Query: 1117 GPWSSSSDIIMCCAPP 1132
S++ C + P
Sbjct: 87 SEAVSATGQTACPSGP 102
Score = 39.0 bits (91), Expect = 0.002
Identities = 11/61 (18%), Positives = 18/61 (29%), Gaps = 3/61 (4%)
Query: 22 YIIERREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPS---ICTT 78
Y + G K ++ +L Y + A+ A G+SE T
Sbjct: 38 YWLTYAPASGLGPEKSVSVPGARSHVTLPDLQAATKYRVLVSAIYAAGRSEAVSATGQTA 97
Query: 79 P 79
Sbjct: 98 C 98
Score = 38.2 bits (89), Expect = 0.004
Identities = 19/131 (14%), Positives = 30/131 (22%), Gaps = 52/131 (39%)
Query: 1559 VDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEG 1618
T DS+ + W+ P + Y + S K
Sbjct: 17 ASETPDSLQVSWTPPL----GRVLHYWLTYAPASGLGPEK-------------------- 52
Query: 1619 KSIGSERGSTAQFLEREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKS 1678
V GA ++ +L Y + A+ A G+S
Sbjct: 53 --------------SVSVPGA-----------RSHVTLPDLQAATKYRVLVSAIYAAGRS 87
Query: 1679 EPS---ICTTP 1686
E T
Sbjct: 88 EAVSATGQTAC 98
Score = 28.6 bits (64), Expect = 8.0
Identities = 7/51 (13%), Positives = 16/51 (31%), Gaps = 4/51 (7%)
Query: 1330 TVPDPPGQPQIVDWDTNNATLMWDRPRTDGGSKIQGYKMLLKTPTGELPTT 1380
+ PP + ++ + W P ++ Y + +G P
Sbjct: 6 SGRSPPSNLALASETPDSLQVSWTPPL----GRVLHYWLTYAPASGLGPEK 52
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like
kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB:
2ou7_A* 3fc2_A* 3thb_A*
Length = 335
Score = 73.5 bits (181), Expect = 1e-13
Identities = 21/94 (22%), Positives = 37/94 (39%), Gaps = 5/94 (5%)
Query: 808 PQPVDIKTSSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIP----VSHNLEKEL 863
P + Y +G G F + T +FA K +P + + +++
Sbjct: 29 EIPEVLVDPRSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKM 88
Query: 864 IRKEIDIMNQLHHPKLINLHDAFEDDDEMVLIFE 897
EI I L H ++ H FED+D + ++ E
Sbjct: 89 SM-EISIHRSLAHQHVVGFHGFFEDNDFVFVVLE 121
>2dm4_A Sortilin-related receptor; beta-sandwich, sorting protein-related
receptor containing LDLR class A repeats, sorla; NMR
{Homo sapiens}
Length = 108
Score = 67.9 bits (166), Expect = 1e-13
Identities = 21/89 (23%), Positives = 30/89 (33%), Gaps = 4/89 (4%)
Query: 1229 DKPSPPQGP-LDVSDITPESCSLSWKPPLDDGGSPITNYVVEKYESATGFWSKLSSFVRS 1287
P P+ L + W PP+ G I Y+VE S + W+ S
Sbjct: 6 SGPDAPRNLQLSLPREAEGVIVGHWAPPIHTHG-LIREYIVEYSRSGSKMWASQR--AAS 62
Query: 1288 PAYDVFGLETNRQYRFRVRAENQYGVSEP 1316
++ L N Y RV A G+
Sbjct: 63 NFTEIKNLLVNTLYTVRVAAVTSRGIGNW 91
Score = 67.1 bits (164), Expect = 3e-13
Identities = 24/100 (24%), Positives = 30/100 (30%), Gaps = 4/100 (4%)
Query: 667 SDRPDPPQFPTV--EDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSWIRVGNTRF 724
S PD P+ + + W PI G I YIVE W
Sbjct: 5 SSGPDAPRNLQLSLPREAEGVIVGHWAPPIHTHG-LIREYIVEYSRSGSKMWASQ-RAAS 62
Query: 725 TTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKD 764
I L Y RV A G + S + + T K
Sbjct: 63 NFTEIKNLLVNTLYTVRVAAVTSRGIGNWSDSKSITTIKG 102
Score = 67.1 bits (164), Expect = 3e-13
Identities = 21/100 (21%), Positives = 33/100 (33%), Gaps = 6/100 (6%)
Query: 371 AKSPYDKPSPPGIPVVTQVGGD--FVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVN 428
S P P ++ + W P+ G I+ Y ++ GS W
Sbjct: 1 GSSGSSGPDAPRNLQLSLPREAEGVIVGHWAPPIHTHG-LIREYIVEYSRSGSKMWASQR 59
Query: 429 VAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASN 468
A + I NL+ Y RV A G+ S + +
Sbjct: 60 AA---SNFTEIKNLLVNTLYTVRVAAVTSRGIGNWSDSKS 96
Score = 67.1 bits (164), Expect = 3e-13
Identities = 21/100 (21%), Positives = 33/100 (33%), Gaps = 6/100 (6%)
Query: 1978 AKSPYDKPSPPGIPVVTQVGGD--FVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVN 2035
S P P ++ + W P+ G I+ Y ++ GS W
Sbjct: 1 GSSGSSGPDAPRNLQLSLPREAEGVIVGHWAPPIHTHG-LIREYIVEYSRSGSKMWASQR 59
Query: 2036 VAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASN 2075
A + I NL+ Y RV A G+ S + +
Sbjct: 60 AA---SNFTEIKNLLVNTLYTVRVAAVTSRGIGNWSDSKS 96
Score = 65.9 bits (161), Expect = 6e-13
Identities = 22/87 (25%), Positives = 32/87 (36%), Gaps = 5/87 (5%)
Query: 902 PHPPENLHADEFAGD--SLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTKVSSYVTTPF 959
P P NL + +W PP G I Y+VE S +W + F
Sbjct: 8 PDAPRNLQLSLPREAEGVIVGHWAPPIHTHG-LIREYIVEYSRSGSKMWASQR--AASNF 64
Query: 960 VRVRNLAIGSTYEFRVMAENQYGLSKP 986
++NL + + Y RV A G+
Sbjct: 65 TEIKNLLVNTLYTVRVAAVTSRGIGNW 91
Score = 62.8 bits (153), Expect = 7e-12
Identities = 22/108 (20%), Positives = 32/108 (29%), Gaps = 9/108 (8%)
Query: 275 GLPGPPIGP-LDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHD 333
P P L + + HW PP + G + Y+VE W
Sbjct: 6 SGPDAPRNLQLSLPREAEGVIVGHWAPPIHTHG-LIREYIVEYSRSGSKMWASQRAA--S 62
Query: 334 TTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPP 381
++ L Y V AV G+G + + K S P
Sbjct: 63 NFTEIKNLLVNTLYTVRVAAVTSRGIGNW---SDSKSITTI--KGSGP 105
Score = 62.8 bits (153), Expect = 7e-12
Identities = 22/108 (20%), Positives = 32/108 (29%), Gaps = 9/108 (8%)
Query: 1882 GLPGPPIGP-LDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHD 1940
P P L + + HW PP + G + Y+VE W
Sbjct: 6 SGPDAPRNLQLSLPREAEGVIVGHWAPPIHTHG-LIREYIVEYSRSGSKMWASQRAA--S 62
Query: 1941 TTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPP 1988
++ L Y V AV G+G + + K S P
Sbjct: 63 NFTEIKNLLVNTLYTVRVAAVTSRGIGNW---SDSKSITTI--KGSGP 105
Score = 61.3 bits (149), Expect = 3e-11
Identities = 28/128 (21%), Positives = 36/128 (28%), Gaps = 41/128 (32%)
Query: 1003 GAPGAPKGV-----DSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIP 1057
P AP+ + E I W+ P H G I+ YIVE W
Sbjct: 6 SGPDAPRNLQLSLPREAEGVIVGHWAPPIHTHG-LIREYIVEYSRSGSKMWASQR---AA 61
Query: 1058 DTSLKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQG 1117
+ +L+ N Y RV AV + G G
Sbjct: 62 SNFT--------------------------------EIKNLLVNTLYTVRVAAVTSRGIG 89
Query: 1118 PWSSSSDI 1125
WS S I
Sbjct: 90 NWSDSKSI 97
Score = 43.2 bits (102), Expect = 6e-05
Identities = 23/137 (16%), Positives = 31/137 (22%), Gaps = 52/137 (37%)
Query: 1553 SLTSKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYV 1612
+L E I W+ P H G I+ YIVE W
Sbjct: 13 NLQLSLPREAEGVIVGHWAPPIHTHG-LIREYIVEYSRSGSKMWAS-------------- 57
Query: 1613 LWVSEGKSIGSERGSTAQFLEREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAV 1672
+ NL+ Y R+ AV
Sbjct: 58 ----------------------------------QRAASNFTEIKNLLVNTLYTVRVAAV 83
Query: 1673 NAIGK---SEPSICTTP 1686
+ G S+ TT
Sbjct: 84 TSRGIGNWSDSKSITTI 100
Score = 42.4 bits (100), Expect = 1e-04
Identities = 15/61 (24%), Positives = 22/61 (36%), Gaps = 6/61 (9%)
Query: 22 YIIERREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGK---SEPSICTT 78
YI+E G +W + NL+ Y R+ AV + G S+ TT
Sbjct: 43 YIVEYSRSGSKMW---ASQRAASNFTEIKNLLVNTLYTVRVAAVTSRGIGNWSDSKSITT 99
Query: 79 P 79
Sbjct: 100 I 100
>2dkm_A Collagen alpha-1(XX) chain; FN3 domain, KIAA1510, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens}
Length = 104
Score = 67.5 bits (165), Expect = 2e-13
Identities = 26/108 (24%), Positives = 42/108 (38%), Gaps = 13/108 (12%)
Query: 1229 DKPSPPQGPLDVSDITPESCSLSWKPPLDDGGSPITNYVVEKYESATGFWSKLSSF-VRS 1287
P PP L ++ +TP + L+W+P + T+Y+V ++ + V
Sbjct: 6 SGPLPPPRALTLAAVTPRTVHLTWQPS-----AGATHYLVRCSPASPKGEEEEREVQVGR 60
Query: 1288 PAYDVFGLETNRQYRFRVRAENQYGVSEPLELDNSITAKFPFTVPDPP 1335
P + GLE R Y V++ SE I A+ T P
Sbjct: 61 PEVLLDGLEPGRDYEVSVQSLRGPEGSEAR----GIRAR---TPTSGP 101
Score = 66.8 bits (163), Expect = 3e-13
Identities = 20/102 (19%), Positives = 31/102 (30%), Gaps = 6/102 (5%)
Query: 274 TGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWI-CISTTCH 332
+ P PP L ++ +T T L W P THY+V S
Sbjct: 5 SSGPLPPPRALTLAAVTPRTVHLTWQPSA-----GATHYLVRCSPASPKGEEEEREVQVG 59
Query: 333 DTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSP 374
++ GL G++Y V ++ P
Sbjct: 60 RPEVLLDGLEPGRDYEVSVQSLRGPEGSEARGIRARTPTSGP 101
Score = 66.8 bits (163), Expect = 3e-13
Identities = 20/102 (19%), Positives = 31/102 (30%), Gaps = 6/102 (5%)
Query: 1881 TGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWI-CISTTCH 1939
+ P PP L ++ +T T L W P THY+V S
Sbjct: 5 SSGPLPPPRALTLAAVTPRTVHLTWQPSA-----GATHYLVRCSPASPKGEEEEREVQVG 59
Query: 1940 DTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSP 1981
++ GL G++Y V ++ P
Sbjct: 60 RPEVLLDGLEPGRDYEVSVQSLRGPEGSEARGIRARTPTSGP 101
Score = 66.4 bits (162), Expect = 4e-13
Identities = 18/93 (19%), Positives = 30/93 (32%), Gaps = 13/93 (13%)
Query: 670 PDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSWIR-----VGNTRF 724
PP+ T+ + ++ L W+ + T+Y+V VG
Sbjct: 9 LPPPRALTLAAVTPRTVHLTWQPS-----AGATHYLVRCSPASPKGEEEEREVQVGRPEV 63
Query: 725 TTMAITGLSPGHQYEFRVYAENVYGRSDPSTTS 757
+ GL PG YE V + S+
Sbjct: 64 L---LDGLEPGRDYEVSVQSLRGPEGSEARGIR 93
Score = 58.3 bits (141), Expect = 3e-10
Identities = 15/98 (15%), Positives = 25/98 (25%), Gaps = 5/98 (5%)
Query: 378 PSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQI 437
PP + V V+L+W + Y + + ++
Sbjct: 9 LPPPRALTLAAVTPRTVHLTWQPS-----AGATHYLVRCSPASPKGEEEEREVQVGRPEV 63
Query: 438 NIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDP 475
+ L GR YE V + S P
Sbjct: 64 LLDGLEPGRDYEVSVQSLRGPEGSEARGIRARTPTSGP 101
Score = 58.3 bits (141), Expect = 3e-10
Identities = 15/98 (15%), Positives = 25/98 (25%), Gaps = 5/98 (5%)
Query: 1985 PSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQI 2044
PP + V V+L+W + Y + + ++
Sbjct: 9 LPPPRALTLAAVTPRTVHLTWQPS-----AGATHYLVRCSPASPKGEEEEREVQVGRPEV 63
Query: 2045 NIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDP 2082
+ L GR YE V + S P
Sbjct: 64 LLDGLEPGRDYEVSVQSLRGPEGSEARGIRARTPTSGP 101
Score = 57.1 bits (138), Expect = 8e-10
Identities = 22/100 (22%), Positives = 34/100 (34%), Gaps = 10/100 (10%)
Query: 904 PPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTKVSSY-VTTPFVRV 962
PP L ++ L W P + T+Y+V + + V P V +
Sbjct: 11 PPRALTLAAVTPRTVHLTWQPS-----AGATHYLVRCSPASPKGEEEEREVQVGRPEVLL 65
Query: 963 RNLAIGSTYEFRVMAENQYGLSKPALTIDPIKAKHPFDVP 1002
L G YE V + S+ I+A+ P P
Sbjct: 66 DGLEPGRDYEVSVQSLRGPEGSEAR----GIRARTPTSGP 101
Score = 39.4 bits (92), Expect = 0.001
Identities = 12/120 (10%), Positives = 23/120 (19%), Gaps = 37/120 (30%)
Query: 1002 PGAPGAPKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSL 1061
P A T ++ L W + Y+V S + + +
Sbjct: 9 LPPPRALTLAAVTPRTVHLTWQPS-----AGATHYLVRCSPASPKGEEEEREVQVGRPEV 63
Query: 1062 KYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPWSS 1121
+ L +YE V ++
Sbjct: 64 --------------------------------LLDGLEPGRDYEVSVQSLRGPEGSEARG 91
Score = 37.9 bits (88), Expect = 0.005
Identities = 9/53 (16%), Positives = 17/53 (32%)
Query: 22 YIIERREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPS 74
Y++ + + V + L G DYE + ++ SE
Sbjct: 38 YLVRCSPASPKGEEEEREVQVGRPEVLLDGLEPGRDYEVSVQSLRGPEGSEAR 90
Score = 31.7 bits (72), Expect = 0.73
Identities = 8/48 (16%), Positives = 14/48 (29%)
Query: 1634 REVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPS 1681
+ + V + L G DYE + ++ SE
Sbjct: 43 SPASPKGEEEEREVQVGRPEVLLDGLEPGRDYEVSVQSLRGPEGSEAR 90
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas;
spindle assembly checkpoint, mitosis, kinase,
activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo
sapiens}
Length = 365
Score = 73.1 bits (179), Expect = 2e-13
Identities = 18/122 (14%), Positives = 41/122 (33%), Gaps = 8/122 (6%)
Query: 782 KKIRGKADEKVSDY-DQYVFDIYSKYVPQPVDIKTSSVYDHYDILEEIGTGAFGVVHRCR 840
K+ + VS Y + + + + + + S + +G GAF V+
Sbjct: 28 FKLLSGLSKPVSSYPNTFEWQCKLPAIKPKTEFQLGS--KLVYVHHLLGEGAFAQVYEAT 85
Query: 841 ER-----KTGNIFAAKFIPVSHNLEKELIRKEIDIMNQLHHPKLINLHDAFEDDDEMVLI 895
+ K F K ++ E + + ++ + + + A + VL+
Sbjct: 86 QGDLNDAKNKQKFVLKVQKPANPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSVLV 145
Query: 896 FE 897
E
Sbjct: 146 GE 147
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural
genomics, structural consortium, SGC, transferase; HET:
FEF; 2.40A {Homo sapiens}
Length = 324
Score = 72.6 bits (179), Expect = 2e-13
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 820 DHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKE------LIRKEIDIMNQ 873
+ Y L+++G G + V++ + + T N+ A K I LE E IR E+ ++
Sbjct: 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEI----RLEHEEGAPCTAIR-EVSLLKD 56
Query: 874 LHHPKLINLHDAFEDDDEMVLIFEVLD 900
L H ++ LHD + + L+FE LD
Sbjct: 57 LKHANIVTLHDIIHTEKSLTLVFEYLD 83
>1wfn_A Sidekick 2; FN3, cell adhesion, structural genomics, riken
structural genomics/proteomics initiative, RSGI; NMR
{Homo sapiens} SCOP: b.1.2.1
Length = 119
Score = 67.5 bits (165), Expect = 2e-13
Identities = 20/110 (18%), Positives = 37/110 (33%), Gaps = 4/110 (3%)
Query: 358 GMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKH 417
G P ++ D P P G +++ + +SW +P + G + GY I
Sbjct: 1 GSSGSSG---PQLVRTHEDVPGPVGHLSFSEILDTSLKVSWQEPGEKNG-ILTGYRISWE 56
Query: 418 EVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSAS 467
E + + + + L Y V A G S+++
Sbjct: 57 EYNRTNTRVTHYLPNVTLEYRVTGLTALTTYTIEVAAMTSKGQGQVSAST 106
Score = 67.5 bits (165), Expect = 2e-13
Identities = 20/110 (18%), Positives = 37/110 (33%), Gaps = 4/110 (3%)
Query: 1965 GMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKH 2024
G P ++ D P P G +++ + +SW +P + G + GY I
Sbjct: 1 GSSGSSG---PQLVRTHEDVPGPVGHLSFSEILDTSLKVSWQEPGEKNG-ILTGYRISWE 56
Query: 2025 EVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSAS 2074
E + + + + L Y V A G S+++
Sbjct: 57 EYNRTNTRVTHYLPNVTLEYRVTGLTALTTYTIEVAAMTSKGQGQVSAST 106
Score = 63.6 bits (155), Expect = 7e-12
Identities = 22/109 (20%), Positives = 37/109 (33%), Gaps = 7/109 (6%)
Query: 656 GMDSAIVKIQ-ISDRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMS 714
S ++ D P P + +I SL + W+ P G +T Y + E+ +
Sbjct: 3 SGSSGPQLVRTHEDVPGPVGHLSFSEILDTSLKVSWQEPGEKNG-ILTGYRISWEEYNRT 61
Query: 715 SW--IRVGNTRFTTMAITGLSPGHQYEFRVYAENVYG---RSDPSTTSD 758
+ +TGL+ Y V A G S + +S
Sbjct: 62 NTRVTHYLPNVTLEYRVTGLTALTTYTIEVAAMTSKGQGQVSASTISSG 110
Score = 62.8 bits (153), Expect = 1e-11
Identities = 25/110 (22%), Positives = 41/110 (37%), Gaps = 10/110 (9%)
Query: 1229 DKPSPPQGPLDVSDITPESCSLSWKPPLDDGGSPITNYVVEKYESATGFWSKLSSFVRSP 1288
D P P L S+I S +SW+ P + G +T Y + +E ++++ ++ +
Sbjct: 16 DVPGPVG-HLSFSEILDTSLKVSWQEPGEKNG-ILTGYRI-SWEEYNRTNTRVTHYLPNV 72
Query: 1289 A--YDVFGLETNRQYRFRVRAENQYGVSEPLELDNSITAKFPFTVPDPPG 1336
Y V GL Y V A G + S + P P
Sbjct: 73 TLEYRVTGLTALTTYTIEVAAMTSKGQGQV-----SASTISSGVPPSGPS 117
Score = 62.1 bits (151), Expect = 2e-11
Identities = 28/145 (19%), Positives = 46/145 (31%), Gaps = 35/145 (24%)
Query: 991 DPIKAKHPFDVPGAPGAPKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIK 1050
P + DVPG G + + S+ + W +P G + Y + +
Sbjct: 7 GPQLVRTHEDVPGPVGHLSFSEILDTSLKVSWQEPGEKNG-ILTGYRISWEEYNRTNT-- 63
Query: 1051 ASMAHIPDTSLKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCA 1110
++P+ +L+Y + T L Y V A
Sbjct: 64 RVTHYLPNVTLEYRV------------------------------TGLTALTTYTIEVAA 93
Query: 1111 VNAAGQGPWSSSSDIIMCCAPPCAP 1135
+ + GQG S+S I PP P
Sbjct: 94 MTSKGQGQVSAS--TISSGVPPSGP 116
Score = 61.7 bits (150), Expect = 2e-11
Identities = 23/89 (25%), Positives = 34/89 (38%), Gaps = 3/89 (3%)
Query: 275 GLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHDT 334
+PGP G L SEI + + W P G +T Y + + + + + T
Sbjct: 16 DVPGPV-GHLSFSEILDTSLKVSWQEPGEKNG-ILTGYRISWEEYNRTNTRVTHYLPNVT 73
Query: 335 T-FIVQGLTEGQEYLFHVMAVNENGMGPP 362
+ V GLT Y V A+ G G
Sbjct: 74 LEYRVTGLTALTTYTIEVAAMTSKGQGQV 102
Score = 61.7 bits (150), Expect = 2e-11
Identities = 23/89 (25%), Positives = 34/89 (38%), Gaps = 3/89 (3%)
Query: 1882 GLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHDT 1941
+PGP G L SEI + + W P G +T Y + + + + + T
Sbjct: 16 DVPGPV-GHLSFSEILDTSLKVSWQEPGEKNG-ILTGYRISWEEYNRTNTRVTHYLPNVT 73
Query: 1942 T-FIVQGLTEGQEYLFHVMAVNENGMGPP 1969
+ V GLT Y V A+ G G
Sbjct: 74 LEYRVTGLTALTTYTIEVAAMTSKGQGQV 102
Score = 61.3 bits (149), Expect = 4e-11
Identities = 25/109 (22%), Positives = 37/109 (33%), Gaps = 7/109 (6%)
Query: 900 DRPHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTKVSSYVTTPF 959
D P P +L E SL + W P + G +T Y + ++YN T
Sbjct: 16 DVPGPVGHLSFSEILDTSLKVSWQEPGEKNG-ILTGYRISWEEYNRTNTRVTHYLPNVTL 74
Query: 960 -VRVRNLAIGSTYEFRVMAENQYGLSKPALTIDPIKAKHPFDVPGAPGA 1007
RV L +TY V A G + + + P P +
Sbjct: 75 EYRVTGLTALTTYTIEVAAMTSKGQGQVSASTISSGV-----PPSGPSS 118
Score = 35.1 bits (81), Expect = 0.048
Identities = 10/61 (16%), Positives = 19/61 (31%)
Query: 22 YIIERREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPSICTTPVK 81
Y I E + + + V L Y + A+ + G+ + S T
Sbjct: 51 YRISWEEYNRTNTRVTHYLPNVTLEYRVTGLTALTTYTIEVAAMTSKGQGQVSASTISSG 110
Query: 82 I 82
+
Sbjct: 111 V 111
Score = 32.0 bits (73), Expect = 0.56
Identities = 9/47 (19%), Positives = 15/47 (31%), Gaps = 1/47 (2%)
Query: 1321 NSITAKFPFTVPDPPGQPQIVDWDTNNATLMWDRPRTDGGSKIQGYK 1367
+ VP P G + + + W P G + GY+
Sbjct: 7 GPQLVRTHEDVPGPVGHLSFSEILDTSLKVSWQEPGEKNG-ILTGYR 52
Score = 30.9 bits (70), Expect = 1.5
Identities = 14/131 (10%), Positives = 34/131 (25%), Gaps = 46/131 (35%)
Query: 1559 VDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEG 1618
+ + S+ + W +P G + Y + + ++P+ +L+Y +
Sbjct: 27 SEILDTSLKVSWQEPGEKNG-ILTGYRISWEEYNRTNT--RVTHYLPNVTLEYRV----- 78
Query: 1619 KSIGSERGSTAQFLEREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKS 1678
L Y + A+ + G+
Sbjct: 79 --------------------------------------TGLTALTTYTIEVAAMTSKGQG 100
Query: 1679 EPSICTTPVKI 1689
+ S T +
Sbjct: 101 QVSASTISSGV 111
>3t04_D Monobody 7C12; engineered binding protein, antibody mimic,
protein-protein SH2 domain, ATP-binding, phosphoprotein;
2.10A {Homo sapiens}
Length = 103
Score = 67.1 bits (164), Expect = 2e-13
Identities = 23/97 (23%), Positives = 32/97 (32%), Gaps = 5/97 (5%)
Query: 670 PDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSW---IRVGNTRFTT 726
P V D SL + W A N+ Y + E S V +T
Sbjct: 8 SSVPTKLEVVDATPTSLKISWDAYYSSWQ-NVKYYRITYGETGGDSPVQEFTVPGYY-ST 65
Query: 727 MAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTK 763
I+GL PG Y VYA + + + I +
Sbjct: 66 ATISGLKPGVDYTITVYAYDTFFPGYEPNSPISINYR 102
Score = 63.2 bits (154), Expect = 5e-12
Identities = 21/98 (21%), Positives = 30/98 (30%), Gaps = 5/98 (5%)
Query: 1231 PSPPQGPLDVSDITPESCSLSWKPPLDDGGSPITNYVVEKYESATGFWSKLSSFVRSPA- 1289
S P L+V D TP S +SW + Y + Y G V
Sbjct: 8 SSVPTK-LEVVDATPTSLKISWDAYYSSWQ-NVKYYRIT-YGETGGDSPVQEFTVPGYYS 64
Query: 1290 -YDVFGLETNRQYRFRVRAENQYGVSEPLELDNSITAK 1326
+ GL+ Y V A + + SI +
Sbjct: 65 TATISGLKPGVDYTITVYAYDTFFPGYEPNSPISINYR 102
Score = 62.5 bits (152), Expect = 1e-11
Identities = 20/96 (20%), Positives = 31/96 (32%), Gaps = 1/96 (1%)
Query: 378 PSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQI 437
S P V + +SWD ++ Y I E G D+ + S
Sbjct: 8 SSVPTKLEVVDATPTSLKISWDAYYSSWQ-NVKYYRITYGETGGDSPVQEFTVPGYYSTA 66
Query: 438 NIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIK 473
I L G Y VYA + ++ S+ +
Sbjct: 67 TISGLKPGVDYTITVYAYDTFFPGYEPNSPISINYR 102
Score = 62.5 bits (152), Expect = 1e-11
Identities = 20/96 (20%), Positives = 31/96 (32%), Gaps = 1/96 (1%)
Query: 1985 PSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQI 2044
S P V + +SWD ++ Y I E G D+ + S
Sbjct: 8 SSVPTKLEVVDATPTSLKISWDAYYSSWQ-NVKYYRITYGETGGDSPVQEFTVPGYYSTA 66
Query: 2045 NIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIK 2080
I L G Y VYA + ++ S+ +
Sbjct: 67 TISGLKPGVDYTITVYAYDTFFPGYEPNSPISINYR 102
Score = 58.2 bits (141), Expect = 3e-10
Identities = 16/90 (17%), Positives = 31/90 (34%), Gaps = 3/90 (3%)
Query: 274 TGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHD 333
+ + P L+V + T + + W+ V +Y + + + T
Sbjct: 5 SSVSSVPTK-LEVVDATPTSLKISWDAYYSSWQ-NVKYYRITYGETGGDSPVQEFTVPGY 62
Query: 334 -TTFIVQGLTEGQEYLFHVMAVNENGMGPP 362
+T + GL G +Y V A + G
Sbjct: 63 YSTATISGLKPGVDYTITVYAYDTFFPGYE 92
Score = 58.2 bits (141), Expect = 3e-10
Identities = 16/90 (17%), Positives = 31/90 (34%), Gaps = 3/90 (3%)
Query: 1881 TGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHD 1940
+ + P L+V + T + + W+ V +Y + + + T
Sbjct: 5 SSVSSVPTK-LEVVDATPTSLKISWDAYYSSWQ-NVKYYRITYGETGGDSPVQEFTVPGY 62
Query: 1941 -TTFIVQGLTEGQEYLFHVMAVNENGMGPP 1969
+T + GL G +Y V A + G
Sbjct: 63 YSTATISGLKPGVDYTITVYAYDTFFPGYE 92
Score = 56.7 bits (137), Expect = 1e-09
Identities = 14/87 (16%), Positives = 25/87 (28%), Gaps = 6/87 (6%)
Query: 904 PPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTK---VSSYVTTPFV 960
P L + SL + W + + Y + + + V Y +T
Sbjct: 10 VPTKLEVVDATPTSLKISWDAYYSSWQ-NVKYYRITYGETGGDSPVQEFTVPGYYST--A 66
Query: 961 RVRNLAIGSTYEFRVMAENQYGLSKPA 987
+ L G Y V A + +
Sbjct: 67 TISGLKPGVDYTITVYAYDTFFPGYEP 93
Score = 49.8 bits (119), Expect = 3e-07
Identities = 16/122 (13%), Positives = 31/122 (25%), Gaps = 33/122 (27%)
Query: 1001 VPGAPGAPKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTS 1060
V P + VD+T S+ + W ++ Y + D ++ +P
Sbjct: 7 VSSVPTKLEVVDATPTSLKISWDAYYSSWQ-NVKYYRITYGETGGDSPVQEFT--VPGYY 63
Query: 1061 LKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPWS 1120
+ + L +Y V A + G
Sbjct: 64 STATI------------------------------SGLKPGVDYTITVYAYDTFFPGYEP 93
Query: 1121 SS 1122
+S
Sbjct: 94 NS 95
Score = 35.1 bits (81), Expect = 0.037
Identities = 17/131 (12%), Positives = 32/131 (24%), Gaps = 48/131 (36%)
Query: 1559 VDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEG 1618
VD+T S+ + W ++ Y + D ++
Sbjct: 17 VDATPTSLKISWDAYYSSWQ-NVKYYRITYGETGGDSPVQ-------------------- 55
Query: 1619 KSIGSERGSTAQFLEREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKS 1678
E V G + ++ L G DY + A +
Sbjct: 56 --------------EFTVPGY-----------YSTATISGLKPGVDYTITVYAYDTFFPG 90
Query: 1679 EPSICTTPVKI 1689
+P+ I
Sbjct: 91 YEP--NSPISI 99
Score = 34.0 bits (78), Expect = 0.10
Identities = 12/61 (19%), Positives = 21/61 (34%), Gaps = 2/61 (3%)
Query: 22 YIIERREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPSICTTPVK 81
Y I E GG ++ + ++ L G DY + A + +P+
Sbjct: 41 YRITYGETGGDSPVQEFTVPGYYSTATISGLKPGVDYTITVYAYDTFFPGYEP--NSPIS 98
Query: 82 I 82
I
Sbjct: 99 I 99
Score = 32.4 bits (74), Expect = 0.30
Identities = 10/63 (15%), Positives = 25/63 (39%), Gaps = 1/63 (1%)
Query: 1330 TVPDPPGQPQIVDWDTNNATLMWDRPRTDGGSKIQGYKMLLKTPTGELPTTIWSKIRPTS 1389
+V P + ++VD + + WD + ++ Y++ G+ P ++ S
Sbjct: 6 SVSSVPTKLEVVDATPTSLKISWDAYYSSWQ-NVKYYRITYGETGGDSPVQEFTVPGYYS 64
Query: 1390 STV 1392
+
Sbjct: 65 TAT 67
>2edd_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal
cancer suppressor, structural genomics, NPPSFA; NMR
{Homo sapiens}
Length = 123
Score = 67.6 bits (165), Expect = 3e-13
Identities = 22/99 (22%), Positives = 33/99 (33%), Gaps = 4/99 (4%)
Query: 670 PDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITN---YIVEKREHPMSSW-IRVGNTRFT 725
PP + HD++ + W + Y V R +S + +T
Sbjct: 19 MLPPVGVQAVALTHDAVRVSWADNSVPKNQKTSEVRLYTVRWRTSFSASAKYKSEDTTSL 78
Query: 726 TMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKD 764
+ TGL P YEF V S S T+ T +
Sbjct: 79 SYTATGLKPNTMYEFSVMVTKNRRSSTWSMTAHATTYEA 117
Score = 63.4 bits (154), Expect = 8e-12
Identities = 20/92 (21%), Positives = 30/92 (32%), Gaps = 3/92 (3%)
Query: 902 PHPPENLHADEFAGDSLTLYWTPPRDNGG---SEITNYVVEKKDYNSTVWTKVSSYVTTP 958
PP + A D++ + W SE+ Y V + S S T+
Sbjct: 19 MLPPVGVQAVALTHDAVRVSWADNSVPKNQKTSEVRLYTVRWRTSFSASAKYKSEDTTSL 78
Query: 959 FVRVRNLAIGSTYEFRVMAENQYGLSKPALTI 990
L + YEF VM S ++T
Sbjct: 79 SYTATGLKPNTMYEFSVMVTKNRRSSTWSMTA 110
Score = 63.0 bits (153), Expect = 1e-11
Identities = 25/126 (19%), Positives = 36/126 (28%), Gaps = 12/126 (9%)
Query: 1217 GSDSASCKVYVVDKPSPPQGP---LDVSDITPESCSLSWKPPLDDGGSPITN---YVVEK 1270
GS +S V S P P + +T ++ +SW + Y V
Sbjct: 1 GSSGSSGFPTSVPDLSTPMLPPVGVQAVALTHDAVRVSWADNSVPKNQKTSEVRLYTVRW 60
Query: 1271 YESATGFWSKLSSFVRSPAYDVFGLETNRQYRFRVRAENQYGVSEPLELDNSITAKFPFT 1330
S + S S +Y GL+ N Y F V S + A T
Sbjct: 61 RTSFSASAKYKSEDTTSLSYTATGLKPNTMYEFSVMVTKNRRSSTW---SMTAHAT---T 114
Query: 1331 VPDPPG 1336
Sbjct: 115 YEASGP 120
Score = 57.2 bits (138), Expect = 1e-09
Identities = 22/107 (20%), Positives = 31/107 (28%), Gaps = 7/107 (6%)
Query: 261 SSGSVSGTFTINITGLPGPPIGPLDV--SEITKHTCTLHWNPPKYDGGLKVT---HYVVE 315
SSGS F ++ L P + P+ V +T + W K + Y V
Sbjct: 2 SSGS--SGFPTSVPDLSTPMLPPVGVQAVALTHDAVRVSWADNSVPKNQKTSEVRLYTVR 59
Query: 316 RRDISMPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPP 362
R S ++ GL Y F VM
Sbjct: 60 WRTSFSASAKYKSEDTTSLSYTATGLKPNTMYEFSVMVTKNRRSSTW 106
Score = 57.2 bits (138), Expect = 1e-09
Identities = 22/107 (20%), Positives = 31/107 (28%), Gaps = 7/107 (6%)
Query: 1868 SSGSVSGTFTINITGLPGPPIGPLDV--SEITKHTCTLHWNPPKYDGGLKVT---HYVVE 1922
SSGS F ++ L P + P+ V +T + W K + Y V
Sbjct: 2 SSGS--SGFPTSVPDLSTPMLPPVGVQAVALTHDAVRVSWADNSVPKNQKTSEVRLYTVR 59
Query: 1923 RRDISMPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPP 1969
R S ++ GL Y F VM
Sbjct: 60 WRTSFSASAKYKSEDTTSLSYTATGLKPNTMYEFSVMVTKNRRSSTW 106
Score = 54.9 bits (132), Expect = 7e-09
Identities = 17/109 (15%), Positives = 24/109 (22%), Gaps = 4/109 (3%)
Query: 360 GPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSR---IQGYWIDK 416
G P PP + D V +SW + ++ Y +
Sbjct: 1 GSSGSSGFPTSVPDLSTPMLPPVGVQAVALTHDAVRVSWADNSVPKNQKTSEVRLYTVRW 60
Query: 417 HEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSS 465
S + L YEF V S S
Sbjct: 61 RTSFSA-SAKYKSEDTTSLSYTATGLKPNTMYEFSVMVTKNRRSSTWSM 108
Score = 54.9 bits (132), Expect = 7e-09
Identities = 17/109 (15%), Positives = 24/109 (22%), Gaps = 4/109 (3%)
Query: 1967 GPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSR---IQGYWIDK 2023
G P PP + D V +SW + ++ Y +
Sbjct: 1 GSSGSSGFPTSVPDLSTPMLPPVGVQAVALTHDAVRVSWADNSVPKNQKTSEVRLYTVRW 60
Query: 2024 HEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSS 2072
S + L YEF V S S
Sbjct: 61 RTSFSA-SAKYKSEDTTSLSYTATGLKPNTMYEFSVMVTKNRRSSTWSM 108
Score = 51.8 bits (124), Expect = 9e-08
Identities = 23/137 (16%), Positives = 34/137 (24%), Gaps = 36/137 (26%)
Query: 989 TIDPIKAKHPFDVPGAPGAPKGVDSTEDSISLVWSKP---RHDGGSPIQRYIVEKRLISD 1045
+ P P + V T D++ + W+ ++ S ++ Y V R
Sbjct: 6 SGFPTSVPDLSTPMLPPVGVQAVALTHDAVRVSWADNSVPKNQKTSEVRLYTVRWRTSFS 65
Query: 1046 DKWIKASMAHIPDTSLKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYE 1105
TSL Y T L N YE
Sbjct: 66 ASA---KYKSEDTTSLSYT------------------------------ATGLKPNTMYE 92
Query: 1106 FRVCAVNAAGQGPWSSS 1122
F V WS +
Sbjct: 93 FSVMVTKNRRSSTWSMT 109
Score = 39.5 bits (92), Expect = 0.002
Identities = 13/61 (21%), Positives = 19/61 (31%), Gaps = 4/61 (6%)
Query: 22 YIIERREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPS---ICTT 78
Y + R A K + S++ L YEF ++ S S TT
Sbjct: 56 YTVRWRTSFSA-SAKYKSEDTTSLSYTATGLKPNTMYEFSVMVTKNRRSSTWSMTAHATT 114
Query: 79 P 79
Sbjct: 115 Y 115
Score = 34.5 bits (79), Expect = 0.11
Identities = 9/42 (21%), Positives = 14/42 (33%), Gaps = 3/42 (7%)
Query: 1648 NVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPS---ICTTP 1686
+ S++ L YEF ++ S S TT
Sbjct: 74 DTTSLSYTATGLKPNTMYEFSVMVTKNRRSSTWSMTAHATTY 115
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding,
nucleotide-bindi phosphoprotein,
serine/threonine-protein kinase; HET: 537 7PE; 2.88A
{Homo sapiens} PDB: 2zmc_A*
Length = 390
Score = 73.3 bits (180), Expect = 3e-13
Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Query: 821 HYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKEL--IRKEIDIMNQLHHP- 877
Y IL++IG+G V + + I+A K++ + + L R EI +N+L
Sbjct: 57 IYSILKQIGSGGSSKVFQVL-NEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS 115
Query: 878 -KLINLHDAFEDDDEMVLIFE 897
K+I L+D D + ++ E
Sbjct: 116 DKIIRLYDYEITDQYIYMVME 136
>1x5i_A Neogenin; RGM binding, fibronectin type III domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
b.1.2.1
Length = 126
Score = 67.5 bits (165), Expect = 3e-13
Identities = 23/128 (17%), Positives = 41/128 (32%), Gaps = 7/128 (5%)
Query: 355 NENGMGPPLEGINPIKAKSPYDKPSPPGIP--VVTQVGGDFVNLSWDKPLDDGGSRIQGY 412
+ GP + ++ +S D+ P +P + + + +SW P + ++GY
Sbjct: 2 SSGSSGPATDWLSAETFESDLDETRVPEVPSSLHVRPLVTSIVVSWTPPENQNI-VVRGY 60
Query: 413 WIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQI 472
I A I NL Y + A N G +P S +
Sbjct: 61 AIGYGIGSPHAQTIKVDY--KQRYYTIENLDPSSHYVITLKAFNNVGEGIPLYESAVTRP 118
Query: 473 KD--PMAA 478
P +
Sbjct: 119 HTSGPSSG 126
Score = 67.5 bits (165), Expect = 3e-13
Identities = 23/128 (17%), Positives = 41/128 (32%), Gaps = 7/128 (5%)
Query: 1962 NENGMGPPLEGINPIKAKSPYDKPSPPGIP--VVTQVGGDFVNLSWDKPLDDGGSRIQGY 2019
+ GP + ++ +S D+ P +P + + + +SW P + ++GY
Sbjct: 2 SSGSSGPATDWLSAETFESDLDETRVPEVPSSLHVRPLVTSIVVSWTPPENQNI-VVRGY 60
Query: 2020 WIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQI 2079
I A I NL Y + A N G +P S +
Sbjct: 61 AIGYGIGSPHAQTIKVDY--KQRYYTIENLDPSSHYVITLKAFNNVGEGIPLYESAVTRP 118
Query: 2080 KD--PMAA 2085
P +
Sbjct: 119 HTSGPSSG 126
Score = 63.2 bits (154), Expect = 9e-12
Identities = 21/103 (20%), Positives = 34/103 (33%), Gaps = 5/103 (4%)
Query: 902 PHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTKVSSYVTTPFVR 961
P P +LH S+ + WTPP + + Y + + T Y +
Sbjct: 28 PEVPSSLHVRPLV-TSIVVSWTPPENQNI-VVRGYAIGYGIGSPHAQTIKVDYKQRYYT- 84
Query: 962 VRNLAIGSTYEFRVMAENQYGLSKPALTIDPIKAKHPFDVPGA 1004
+ NL S Y + A N G P + + P +
Sbjct: 85 IENLDPSSHYVITLKAFNNVGEGIPLY--ESAVTRPHTSGPSS 125
Score = 62.5 bits (152), Expect = 2e-11
Identities = 16/96 (16%), Positives = 29/96 (30%), Gaps = 2/96 (2%)
Query: 670 PDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSWIRVGNTRFTTMAI 729
P+ P V + S+ + W P + + Y + + + + I
Sbjct: 28 PEVPSSLHVRPLV-TSIVVSWTPPE-NQNIVVRGYAIGYGIGSPHAQTIKVDYKQRYYTI 85
Query: 730 TGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKDT 765
L P Y + A N G P S + +
Sbjct: 86 ENLDPSSHYVITLKAFNNVGEGIPLYESAVTRPHTS 121
Score = 61.7 bits (150), Expect = 4e-11
Identities = 20/109 (18%), Positives = 36/109 (33%), Gaps = 8/109 (7%)
Query: 1229 DKPSPPQGPLDVS-DITPESCSLSWKPPLDDGGSPITNYVVEKYESATGFWSKLSSFVRS 1287
D+ P+ P + S +SW PP + + Y + Y + + +
Sbjct: 23 DETRVPEVPSSLHVRPLVTSIVVSWTPPENQNI-VVRGYAIG-YGIGSPHAQTIKVDYKQ 80
Query: 1288 PAYDVFGLETNRQYRFRVRAENQYGVSEPLELDNSITAKFPFTVPDPPG 1336
Y + L+ + Y ++A N G PL S + P
Sbjct: 81 RYYTIENLDPSSHYVITLKAFNNVGEGIPLY--ESAVTR---PHTSGPS 124
Score = 60.2 bits (146), Expect = 1e-10
Identities = 20/103 (19%), Positives = 30/103 (29%), Gaps = 6/103 (5%)
Query: 277 PGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHDTTF 336
P P + + W PP+ V Y + PH I +
Sbjct: 28 PEVPSSL--HVRPLVTSIVVSWTPPENQNI-VVRGYAIGYGI-GSPHAQTIKVDYKQRYY 83
Query: 337 IVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPS 379
++ L Y+ + A N G G PL + PS
Sbjct: 84 TIENLDPSSHYVITLKAFNNVGEGIPLY--ESAVTRPHTSGPS 124
Score = 60.2 bits (146), Expect = 1e-10
Identities = 20/103 (19%), Positives = 30/103 (29%), Gaps = 6/103 (5%)
Query: 1884 PGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHDTTF 1943
P P + + W PP+ V Y + PH I +
Sbjct: 28 PEVPSSL--HVRPLVTSIVVSWTPPENQNI-VVRGYAIGYGI-GSPHAQTIKVDYKQRYY 83
Query: 1944 IVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPS 1986
++ L Y+ + A N G G PL + PS
Sbjct: 84 TIENLDPSSHYVITLKAFNNVGEGIPLY--ESAVTRPHTSGPS 124
Score = 50.1 bits (120), Expect = 4e-07
Identities = 18/140 (12%), Positives = 33/140 (23%), Gaps = 36/140 (25%)
Query: 984 SKPALTIDPIKAKHPFDVPGAPGAPKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLI 1043
+ VP P + V SI + W+ P + ++ Y + +
Sbjct: 10 TDWLSAETFESDLDETRVPEVPSSLH-VRPLVTSIVVSWTPPENQNI-VVRGYAIGYGIG 67
Query: 1044 SDDKWIKASMAHIPDTSLKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHE 1103
S + Y + +L +
Sbjct: 68 SPHAQTI----KVDYKQRYYTI------------------------------ENLDPSSH 93
Query: 1104 YEFRVCAVNAAGQGPWSSSS 1123
Y + A N G+G S
Sbjct: 94 YVITLKAFNNVGEGIPLYES 113
Score = 35.5 bits (82), Expect = 0.041
Identities = 15/130 (11%), Positives = 34/130 (26%), Gaps = 48/130 (36%)
Query: 1559 VDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEG 1618
V SI + W+ P + ++ Y + Y +
Sbjct: 36 VRPLVTSIVVSWTPPENQNI-VVRGYAIG-----------------------YGIGSPHA 71
Query: 1619 KSIGSERGSTAQFLEREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKS 1678
++I + +++ NL + Y + A N +G+
Sbjct: 72 QTIKVDYKQR------------------------YYTIENLDPSSHYVITLKAFNNVGEG 107
Query: 1679 EPSICTTPVK 1688
P + +
Sbjct: 108 IPLYESAVTR 117
Score = 33.6 bits (77), Expect = 0.20
Identities = 7/61 (11%), Positives = 17/61 (27%), Gaps = 3/61 (4%)
Query: 1309 NQYGVSEPLELDNSITAKFPFTVPDPPGQPQIVDWD--TNNATLMWDRPRTDGGSKIQGY 1366
+ + ++ T + P P + + + W P ++GY
Sbjct: 2 SSGSSGPATDWLSAETFESDLDETRVPEVPSSLHVRPLVTSIVVSWTPPENQNI-VVRGY 60
Query: 1367 K 1367
Sbjct: 61 A 61
Score = 31.7 bits (72), Expect = 0.83
Identities = 11/60 (18%), Positives = 20/60 (33%), Gaps = 2/60 (3%)
Query: 22 YIIERREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPSICTTPVK 81
Y I DY +++ NL + Y + A N +G+ P + +
Sbjct: 60 YAIGYGIGSPHAQTIKVDYKQR--YYTIENLDPSSHYVITLKAFNNVGEGIPLYESAVTR 117
>4doh_R Interleukin-20 receptor subunit alpha; IL10 family cytokine
receptor complex, alpha helical cytokin beta sandwhich
receptor fold, signaling complex; HET: NAG; 2.80A {Homo
sapiens}
Length = 221
Score = 70.3 bits (171), Expect = 3e-13
Identities = 31/216 (14%), Positives = 57/216 (26%), Gaps = 22/216 (10%)
Query: 273 ITGLPGPPIGPLDVS-EITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWI----CI 327
+ + G P +++ L W PP+ G+KVT Y V+ W+ C
Sbjct: 2 VPCVSGGLPKPANITFLSINMKNVLQWTPPEGLQGVKVT-YTVQYFIYGQKKWLNKSECR 60
Query: 328 STTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVT 387
+ + +Y V A+ E + PP + + T
Sbjct: 61 NINRTYCDLSAETSDYEHQYYARVRAIWGTKCSKWAESGRFYPFLET--QIGPPEVALTT 118
Query: 388 QVGGDFVNLSWDKPLDDGGSRIQ----------GYWIDKHEVGSDAWQRVNVAICAPSQI 437
V L+ + + Y + S+ V +
Sbjct: 119 DEKSISVVLTAPEKWKRNPEDLPVSMQQIYSNLKYNVSVLNTKSNRTWSQCVTNH---TL 175
Query: 438 NIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIK 473
+ L Y V + G + S +
Sbjct: 176 VLTWLEPNTLYCVHVESFVP-GPPRRAQPSEKQCAR 210
Score = 70.3 bits (171), Expect = 3e-13
Identities = 31/216 (14%), Positives = 57/216 (26%), Gaps = 22/216 (10%)
Query: 1880 ITGLPGPPIGPLDVS-EITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWI----CI 1934
+ + G P +++ L W PP+ G+KVT Y V+ W+ C
Sbjct: 2 VPCVSGGLPKPANITFLSINMKNVLQWTPPEGLQGVKVT-YTVQYFIYGQKKWLNKSECR 60
Query: 1935 STTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVT 1994
+ + +Y V A+ E + PP + + T
Sbjct: 61 NINRTYCDLSAETSDYEHQYYARVRAIWGTKCSKWAESGRFYPFLET--QIGPPEVALTT 118
Query: 1995 QVGGDFVNLSWDKPLDDGGSRIQ----------GYWIDKHEVGSDAWQRVNVAICAPSQI 2044
V L+ + + Y + S+ V +
Sbjct: 119 DEKSISVVLTAPEKWKRNPEDLPVSMQQIYSNLKYNVSVLNTKSNRTWSQCVTNH---TL 175
Query: 2045 NIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIK 2080
+ L Y V + G + S +
Sbjct: 176 VLTWLEPNTLYCVHVESFVP-GPPRRAQPSEKQCAR 210
Score = 69.5 bits (169), Expect = 5e-13
Identities = 42/224 (18%), Positives = 63/224 (28%), Gaps = 35/224 (15%)
Query: 904 PPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTKVSSYVTTPF---- 959
P N+ L WTPP G ++T Y V+ Y W S
Sbjct: 11 KPANITFLSI-NMKNVLQWTPPEGLQGVKVT-YTVQYFIYGQKKWLNKSECRNINRTYCD 68
Query: 960 VRVRNLAIGSTYEFRVMAENQYGLSKPALTIDPIKAKHPFDVPGAPGAPKGVDSTEDSIS 1019
+ Y RV A SK A + P + + E SIS
Sbjct: 69 LSAETSDYEHQYYARVRAIWGTKCSKWAESGRFYPFLETQIGPPEVA----LTTDEKSIS 124
Query: 1020 LVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEGKSIGSERGS 1079
+V + P +P + +++ S+ LKY + V KS +
Sbjct: 125 VVLTAPEKWKRNPEDLPVSMQQIYSN---------------LKYNVSVLNTKSNRTWSQC 169
Query: 1080 TAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAA--GQGPWSS 1121
+T L N Y V + + S
Sbjct: 170 VTNHTL--------VLTWLEPNTLYCVHVESFVPGPPRRAQPSE 205
Score = 48.7 bits (115), Expect = 6e-06
Identities = 19/99 (19%), Positives = 28/99 (28%), Gaps = 7/99 (7%)
Query: 672 PPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSWIRVG---NTRFTTMA 728
P T I + L W P Y V+ + W+ N T
Sbjct: 11 KPANITFLSI-NMKNVLQWTPPE-GLQGVKVTYTVQYFIYGQKKWLNKSECRNINRTYCD 68
Query: 729 IT--GLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKDT 765
++ HQY RV A S + + +T
Sbjct: 69 LSAETSDYEHQYYARVRAIWGTKCSKWAESGRFYPFLET 107
Score = 48.3 bits (114), Expect = 8e-06
Identities = 27/166 (16%), Positives = 55/166 (33%), Gaps = 12/166 (7%)
Query: 1250 LSWKPPLDDGGSPITNYVVEKYESATGFWSKLS--SFVRSPAYDV--FGLETNRQYRFRV 1305
L W PP G +T Y V+ + W S + D+ + QY RV
Sbjct: 26 LQWTPPEGLQGVKVT-YTVQYFIYGQKKWLNKSECRNINRTYCDLSAETSDYEHQYYARV 84
Query: 1306 RAENQYGVSEPLELDNSITAKFPFTVPDPPGQPQI-VDWDTNNATLMWDRPRTDGGSKIQ 1364
RA S+ + + +F + G P++ + D + +++ P +
Sbjct: 85 RAIWGTKCSKW-----AESGRFYPFLETQIGPPEVALTTDEKSISVVLTAPEKWKRNPED 139
Query: 1365 -GYKMLLKTPTGELPTTIWSKIRPTSSTVYCKDTTMNSSNSEPGKQ 1409
M + ++ + + + + T+ + EP
Sbjct: 140 LPVSMQQIYSNLKYNVSVLNTKSNRTWSQCVTNHTLVLTWLEPNTL 185
Score = 37.1 bits (85), Expect = 0.035
Identities = 20/123 (16%), Positives = 35/123 (28%), Gaps = 11/123 (8%)
Query: 22 YIIERREVGGAIWLK---CNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPSICTT 78
Y ++ G WL C + N C S + Y R+ A+ S +
Sbjct: 41 YTVQYFIYGQKKWLNKSECRNINRTYCDLSAETSDYEHQYYARVRAIWGTKCS-KWAESG 99
Query: 79 PVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNG-REISSGARY 137
P+ + K +++ A L ++I S +Y
Sbjct: 100 RFYPFLETQIGPPEVA------LTTDEKSISVVLTAPEKWKRNPEDLPVSMQQIYSNLKY 153
Query: 138 RVE 140
V
Sbjct: 154 NVS 156
Score = 37.1 bits (85), Expect = 0.042
Identities = 34/212 (16%), Positives = 57/212 (26%), Gaps = 46/212 (21%)
Query: 1001 VPGAPGAPKGV--DSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASM-AHIP 1057
V G P + S L W+ P G + Y V+ + KW+ S +I
Sbjct: 5 VSGGLPKPANITFLSINMKNVLQWTPPEGLQGVKVT-YTVQYFIYGQKKWLNKSECRNIN 63
Query: 1058 DTSLKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQG 1117
T +A+ + H+Y RV A+
Sbjct: 64 RTYCDL----------------SAETSDY--------------EHQYYARVRAIWGTKCS 93
Query: 1118 PWSSSSDIIMCCAPPCAPKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEV 1177
W+ S P L +E +I+V + V
Sbjct: 94 KWAESGRFYPFLETQIGP---------PEVALTTDEKSISVVLT--APEKWKRNPEDLPV 142
Query: 1178 SPDGRIKFETSENQTIYRNKSAKRATDSGSYT 1209
S +I N ++ KS + + +
Sbjct: 143 SMQ-QIYSNLKYNVSVLNTKSNRTWSQCVTNH 173
Score = 35.6 bits (81), Expect = 0.12
Identities = 25/151 (16%), Positives = 39/151 (25%), Gaps = 22/151 (14%)
Query: 635 TIRDASNVDTAPY-----RVVAENDLGMDSAIVKIQISDRPDPPQFPTVEDIGH--DSLA 687
T D S + RV A + + P + S++
Sbjct: 65 TYCDLSAETSDYEHQYYARVRAIWGTKCSKWAESGRFYPFLETQIGPPEVALTTDEKSIS 124
Query: 688 LVWRAP----IWDGGSNIT--------NYIVEKREHPMSSWIRVGNTRFTTMAITGLSPG 735
+V AP ++ Y V + T+ +T L P
Sbjct: 125 VVLTAPEKWKRNPEDLPVSMQQIYSNLKYNVSVLNTKSNRTWSQ-CVTNHTLVLTWLEPN 183
Query: 736 HQYEFRV--YAENVYGRSDPSTTSDLITTKD 764
Y V + R+ PS T KD
Sbjct: 184 TLYCVHVESFVPGPPRRAQPSEKQCARTLKD 214
Score = 35.2 bits (80), Expect = 0.16
Identities = 26/190 (13%), Positives = 45/190 (23%), Gaps = 51/190 (26%)
Query: 1559 VDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEG 1618
S L W+ P G + Y V+ + KW+ S
Sbjct: 17 FLSINMKNVLQWTPPEGLQGVKVT-YTVQYFIYGQKKWLNKS------------------ 57
Query: 1619 KSIGSERGSTAQFLEREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKS 1678
+C + N C S + Y R+ A+ S
Sbjct: 58 ------------------------ECRNINRTYCDLSAETSDYEHQYYARVRAIWGTKCS 93
Query: 1679 EPSICTTPVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNG-RE 1737
+ P+ + K +++ A L ++
Sbjct: 94 -KWAESGRFYPFLETQIGPPEVA------LTTDEKSISVVLTAPEKWKRNPEDLPVSMQQ 146
Query: 1738 ISSGARYRVE 1747
I S +Y V
Sbjct: 147 IYSNLKYNVS 156
Score = 32.5 bits (73), Expect = 1.0
Identities = 26/135 (19%), Positives = 39/135 (28%), Gaps = 16/135 (11%)
Query: 259 SNSSGSVSGTFTINITGLPGPPIGPLDVSEITKH-TCTLHWNPPKYDGGLKVTH------ 311
S + SG F + GPP L E + T + L V+
Sbjct: 91 KCSKWAESGRFYPFLETQIGPPEVALTTDEKSISVVLTAPEKWKRNPEDLPVSMQQIYSN 150
Query: 312 --YVVERRDISMPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNE--NGMGPPLEGIN 367
Y V + T + T ++ L Y HV + P E
Sbjct: 151 LKYNVSVLNTKSNRTWSQCVT--NHTLVLTWLEPNTLYCVHVESFVPGPPRRAQPSE--- 205
Query: 368 PIKAKSPYDKPSPPG 382
A++ D+ S G
Sbjct: 206 KQCARTLKDQSSIEG 220
Score = 32.5 bits (73), Expect = 1.0
Identities = 26/135 (19%), Positives = 39/135 (28%), Gaps = 16/135 (11%)
Query: 1866 SNSSGSVSGTFTINITGLPGPPIGPLDVSEITKH-TCTLHWNPPKYDGGLKVTH------ 1918
S + SG F + GPP L E + T + L V+
Sbjct: 91 KCSKWAESGRFYPFLETQIGPPEVALTTDEKSISVVLTAPEKWKRNPEDLPVSMQQIYSN 150
Query: 1919 --YVVERRDISMPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNE--NGMGPPLEGIN 1974
Y V + T + T ++ L Y HV + P E
Sbjct: 151 LKYNVSVLNTKSNRTWSQCVT--NHTLVLTWLEPNTLYCVHVESFVPGPPRRAQPSE--- 205
Query: 1975 PIKAKSPYDKPSPPG 1989
A++ D+ S G
Sbjct: 206 KQCARTLKDQSSIEG 220
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1,
selectivity residues, POLO-like K structure based drug
design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo
sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A*
3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A*
3db6_A* 3dbe_A* 3dbf_A*
Length = 294
Score = 71.8 bits (177), Expect = 3e-13
Identities = 21/94 (22%), Positives = 37/94 (39%), Gaps = 5/94 (5%)
Query: 808 PQPVDIKTSSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIP----VSHNLEKEL 863
P + Y +G G F + T +FA K +P + + +++
Sbjct: 3 EIPEVLVDPRSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKM 62
Query: 864 IRKEIDIMNQLHHPKLINLHDAFEDDDEMVLIFE 897
EI I L H ++ H FED+D + ++ E
Sbjct: 63 SM-EISIHRSLAHQHVVGFHGFFEDNDFVFVVLE 95
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein
kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Length = 326
Score = 72.0 bits (177), Expect = 3e-13
Identities = 21/68 (30%), Positives = 42/68 (61%), Gaps = 2/68 (2%)
Query: 820 DHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQL-HHPK 878
++++E +G G +G V++ R KTG + A K + V+ + E+E I++EI+++ + HH
Sbjct: 24 GIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD-EEEEIKQEINMLKKYSHHRN 82
Query: 879 LINLHDAF 886
+ + AF
Sbjct: 83 IATYYGAF 90
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition
state, activation helix, serine/threonine-PR kinase;
HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Length = 340
Score = 72.4 bits (178), Expect = 3e-13
Identities = 22/83 (26%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Query: 820 DHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEK-ELIRKEIDI-MNQLHHP 877
D + + E+G GA+GVV + R +G I A K I + N ++ + + ++DI M + P
Sbjct: 51 DDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCP 110
Query: 878 KLINLHDAFEDDDEMVLIFEVLD 900
+ + A + ++ + E++D
Sbjct: 111 FTVTFYGALFREGDVWICMELMD 133
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo
sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A*
1qa9_A
Length = 182
Score = 69.1 bits (169), Expect = 4e-13
Identities = 25/193 (12%), Positives = 55/193 (28%), Gaps = 34/193 (17%)
Query: 491 NAIQNHNAQFQCTI--TGCPKPTISWLKGSREIT------------PSARHHIFAEGDTY 536
+ I W K S + + +F G
Sbjct: 10 WGALGQDINLDIPSFQMSDDIDDIKWEKTSDKKKIAQFRKEKETFKEKDTYKLFKNG--- 66
Query: 537 TLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENVVV 596
TL I + D D Y + G + + K ++ N +
Sbjct: 67 TLKIKHLKTDDQDIYKVSIYDTKGKNVLEKIFDL----KIQERVSKPKISW--TCINTTL 120
Query: 597 KIPFTGYPKPKITWYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAPYRVVAENDLG 656
P++ Y+D + H++ S+R + + +A ++ A N +
Sbjct: 121 TCEVMNGTDPELNLYQDGK--------HLKLSQR---VITHKWTTSLSAKFKCTAGNKVS 169
Query: 657 MDSAIVKIQISDR 669
+S++ + ++
Sbjct: 170 KESSVEPVSCPEK 182
Score = 66.1 bits (161), Expect = 4e-12
Identities = 21/193 (10%), Positives = 50/193 (25%), Gaps = 33/193 (17%)
Query: 98 KDLVVPLGK--LLTLQCEATGTPVPKCRWLRNGRE------------ISSGARYRVETAG 143
+ LG+ L + + +W + + Y++ G
Sbjct: 7 LETWGALGQDINLDIPSFQMSDDIDDIKWEKTSDKKKIAQFRKEKETFKEKDTYKLFKNG 66
Query: 144 GVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMPNALYI-PEGDNTK 202
L + D Y Y++ G + +I + I NT
Sbjct: 67 ---TLKIKHLKTDDQDIYKVSIYDTKGKNVLEKIFDL----KIQERVSKPKISWTCINTT 119
Query: 203 VKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSS 262
+ E++L ++G+ ++ R + + + + N
Sbjct: 120 LTCEVMNGTDPELNLYQDGKHLKLSQR-----------VITHKWTTSLSAKFKCTAGNKV 168
Query: 263 GSVSGTFTINITG 275
S ++
Sbjct: 169 SKESSVEPVSCPE 181
Score = 66.1 bits (161), Expect = 4e-12
Identities = 21/193 (10%), Positives = 50/193 (25%), Gaps = 33/193 (17%)
Query: 1705 KDLVVPLGK--LLTLQCEATGTPVPKCRWLRNGRE------------ISSGARYRVETAG 1750
+ LG+ L + + +W + + Y++ G
Sbjct: 7 LETWGALGQDINLDIPSFQMSDDIDDIKWEKTSDKKKIAQFRKEKETFKEKDTYKLFKNG 66
Query: 1751 GVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMPNALYI-PEGDNTK 1809
L + D Y Y++ G + +I + I NT
Sbjct: 67 ---TLKIKHLKTDDQDIYKVSIYDTKGKNVLEKIFDL----KIQERVSKPKISWTCINTT 119
Query: 1810 VKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSS 1869
+ E++L ++G+ ++ R + + + + N
Sbjct: 120 LTCEVMNGTDPELNLYQDGKHLKLSQR-----------VITHKWTTSLSAKFKCTAGNKV 168
Query: 1870 GSVSGTFTINITG 1882
S ++
Sbjct: 169 SKESSVEPVSCPE 181
Score = 47.2 bits (112), Expect = 1e-05
Identities = 15/129 (11%), Positives = 42/129 (32%), Gaps = 13/129 (10%)
Query: 1139 SDLSIRDMTVLAGEEFTITVPFSGRPKPTP--IWTVNGDEVS----PDGRIKFETSENQT 1192
+ + G++ + +P W D+ + F+ +
Sbjct: 2 EITNALETWGALGQDINLDIPSFQMSDDIDDIKWEKTSDKKKIAQFRKEKETFKEKDTYK 61
Query: 1193 IYRNKSAK----RATDSGSYTIQLVNTVGSDSASCK--VYVVDKPSPPQGPLDVSDITPE 1246
+++N + K + D Y + + +T G + + + ++ S P+ + T
Sbjct: 62 LFKNGTLKIKHLKTDDQDIYKVSIYDTKGKNVLEKIFDLKIQERVSKPKISWTCINTT-L 120
Query: 1247 SCSLSWKPP 1255
+C +
Sbjct: 121 TCEVMNGTD 129
Score = 46.4 bits (110), Expect = 2e-05
Identities = 11/76 (14%), Positives = 25/76 (32%), Gaps = 11/76 (14%)
Query: 2100 IQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYV 2159
N C + P ++ + + + S R +I + + ++
Sbjct: 113 WTCINTTLTCEVMNGTDPELNLYQDGKHLKLSQR-----------VITHKWTTSLSAKFK 161
Query: 2160 CRAVNKGGVKSTKAEL 2175
C A NK +S+ +
Sbjct: 162 CTAGNKVSKESSVEPV 177
Score = 44.5 bits (105), Expect = 9e-05
Identities = 13/97 (13%), Positives = 32/97 (32%), Gaps = 13/97 (13%)
Query: 591 GENVVVKIPF--TGYPKPKITWYRDNEVIE----SGGHFHVETSERHAI-----LTIRDA 639
G+++ + IP I W + ++ + + + + + L I+
Sbjct: 14 GQDINLDIPSFQMSDDIDDIKWEKTSDKKKIAQFRKEKETFKEKDTYKLFKNGTLKIKHL 73
Query: 640 SNVDTAPYRVVAENDLGMDSAIVKIQIS--DRPDPPQ 674
D Y+V + G + + +R P+
Sbjct: 74 KTDDQDIYKVSIYDTKGKNVLEKIFDLKIQERVSKPK 110
Score = 42.2 bits (99), Expect = 5e-04
Identities = 12/88 (13%), Positives = 29/88 (32%), Gaps = 4/88 (4%)
Query: 194 YIPEGDNTK-VKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAG 252
D+ +K D+ K + D +K + + + IK ++ +D
Sbjct: 23 SFQMSDDIDDIKWEKTSDKKKIAQFRKEKETFKEKDTYK--LFKNGTLK-IKHLKTDDQD 79
Query: 253 DYTVNLSNSSGSVSGTFTINITGLPGPP 280
Y V++ ++ G ++
Sbjct: 80 IYKVSIYDTKGKNVLEKIFDLKIQERVS 107
Score = 42.2 bits (99), Expect = 5e-04
Identities = 12/88 (13%), Positives = 29/88 (32%), Gaps = 4/88 (4%)
Query: 1801 YIPEGDNTK-VKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAG 1859
D+ +K D+ K + D +K + + + IK ++ +D
Sbjct: 23 SFQMSDDIDDIKWEKTSDKKKIAQFRKEKETFKEKDTYK--LFKNGTLK-IKHLKTDDQD 79
Query: 1860 DYTVNLSNSSGSVSGTFTINITGLPGPP 1887
Y V++ ++ G ++
Sbjct: 80 IYKVSIYDTKGKNVLEKIFDLKIQERVS 107
Score = 39.9 bits (93), Expect = 0.004
Identities = 14/100 (14%), Positives = 27/100 (27%), Gaps = 22/100 (22%)
Query: 1131 PPCAPKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSEN 1190
PKI+ T+T P +G + R+
Sbjct: 105 RVSKPKISWT----------CINTTLTCEVMNGTDPELNLYQDGKHLKLSQRV------- 147
Query: 1191 QTIYRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYVVDK 1230
++ + + S + N V +S+ V +K
Sbjct: 148 -ITHKWTT----SLSAKFKCTAGNKVSKESSVEPVSCPEK 182
Score = 39.9 bits (93), Expect = 0.004
Identities = 11/113 (9%), Positives = 29/113 (25%), Gaps = 16/113 (14%)
Query: 1431 DITVKAGEDFSIHVPFMAFPQP-------------AAFWFANDSIIDDSDTRVHKQLTMN 1477
+ G+D ++ +P F +
Sbjct: 8 ETWGALGQDINLDIPSFQMSDDIDDIKWEKTSDKKKIAQFRKEKETFKEKDTYK---LFK 64
Query: 1478 SASLVVKNSQRSDGGQYRLQLKNPAGFDTATLHSRLRTLPDSVNPRCHLPSST 1530
+ +L +K+ + D Y++ + + G + L+ P+
Sbjct: 65 NGTLKIKHLKTDDQDIYKVSIYDTKGKNVLEKIFDLKIQERVSKPKISWTCIN 117
Score = 38.3 bits (89), Expect = 0.010
Identities = 13/94 (13%), Positives = 21/94 (22%), Gaps = 17/94 (18%)
Query: 2098 NAIQNHNAQFQCTI--TGCPKPTISWLKGSREIT------------PSARHHIFAEGDTY 2143
+ I W K S + + +F G
Sbjct: 10 WGALGQDINLDIPSFQMSDDIDDIKWEKTSDKKKIAQFRKEKETFKEKDTYKLFKNG--- 66
Query: 2144 TLIINSVYGVDADEYVCRAVNKGGVKSTKAELII 2177
TL I + D D Y + G + +
Sbjct: 67 TLKIKHLKTDDQDIYKVSIYDTKGKNVLEKIFDL 100
>3cx2_A Myosin-binding protein C, cardiac-type; protonation states,
actin-binding, cardiomyopathy, cell adhesion, disease
mutation, immunoglobulin domain; 1.30A {Homo sapiens}
PDB: 2v6h_A 2avg_A
Length = 108
Score = 66.6 bits (162), Expect = 4e-13
Identities = 18/100 (18%), Positives = 35/100 (35%), Gaps = 12/100 (12%)
Query: 93 FIVPLKDLVVPLGKLLTLQCEATGTPV---PKCRWLRN---------GREISSGARYRVE 140
F++ +D V +G +T G + P +W + G+ + Y
Sbjct: 7 FVMRPQDGEVTVGGSITFSARVAGASLLKPPVVKWFKGKWVDLSSKVGQHLQLHDSYDRA 66
Query: 141 TAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKI 180
+ +F LH + G Y CE F ++ + +
Sbjct: 67 SKVYLFELHITDAQPAFTGSYRCEVSTKDKFDCSNFNLTV 106
Score = 66.6 bits (162), Expect = 4e-13
Identities = 18/100 (18%), Positives = 35/100 (35%), Gaps = 12/100 (12%)
Query: 1700 FIVPLKDLVVPLGKLLTLQCEATGTPV---PKCRWLRN---------GREISSGARYRVE 1747
F++ +D V +G +T G + P +W + G+ + Y
Sbjct: 7 FVMRPQDGEVTVGGSITFSARVAGASLLKPPVVKWFKGKWVDLSSKVGQHLQLHDSYDRA 66
Query: 1748 TAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKI 1787
+ +F LH + G Y CE F ++ + +
Sbjct: 67 SKVYLFELHITDAQPAFTGSYRCEVSTKDKFDCSNFNLTV 106
Score = 63.1 bits (153), Expect = 7e-12
Identities = 12/99 (12%), Positives = 27/99 (27%), Gaps = 12/99 (12%)
Query: 484 IVPLRNANAIQNHNAQFQCTITGCP---KPTISWLKG---------SREITPSARHHIFA 531
++ ++ + F + G P + W KG + + + +
Sbjct: 8 VMRPQDGEVTVGGSITFSARVAGASLLKPPVVKWFKGKWVDLSSKVGQHLQLHDSYDRAS 67
Query: 532 EGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELII 570
+ + L I Y C K + L +
Sbjct: 68 KVYLFELHITDAQPAFTGSYRCEVSTKDKFDCSNFNLTV 106
Score = 63.1 bits (153), Expect = 7e-12
Identities = 12/99 (12%), Positives = 27/99 (27%), Gaps = 12/99 (12%)
Query: 2091 IVPLRNANAIQNHNAQFQCTITGCP---KPTISWLKG---------SREITPSARHHIFA 2138
++ ++ + F + G P + W KG + + + +
Sbjct: 8 VMRPQDGEVTVGGSITFSARVAGASLLKPPVVKWFKGKWVDLSSKVGQHLQLHDSYDRAS 67
Query: 2139 EGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELII 2177
+ + L I Y C K + L +
Sbjct: 68 KVYLFELHITDAQPAFTGSYRCEVSTKDKFDCSNFNLTV 106
Score = 51.9 bits (124), Expect = 6e-08
Identities = 17/90 (18%), Positives = 28/90 (31%), Gaps = 12/90 (13%)
Query: 591 GENVVVKIPFTGYP---KPKITWYRDNEV---IESGGHFHVETSERHAI------LTIRD 638
G ++ G P + W++ V + G H + S A L I D
Sbjct: 19 GGSITFSARVAGASLLKPPVVKWFKGKWVDLSSKVGQHLQLHDSYDRASKVYLFELHITD 78
Query: 639 ASNVDTAPYRVVAENDLGMDSAIVKIQISD 668
A T YR D + + + +
Sbjct: 79 AQPAFTGSYRCEVSTKDKFDCSNFNLTVHE 108
Score = 44.6 bits (105), Expect = 2e-05
Identities = 17/92 (18%), Positives = 29/92 (31%), Gaps = 11/92 (11%)
Query: 1430 RDITVKAGEDFSIHVPFMAFP---QPAAFWFANDSIIDDSDTRVHKQLT--------MNS 1478
+D V G + P WF + S H QL +
Sbjct: 12 QDGEVTVGGSITFSARVAGASLLKPPVVKWFKGKWVDLSSKVGQHLQLHDSYDRASKVYL 71
Query: 1479 ASLVVKNSQRSDGGQYRLQLKNPAGFDTATLH 1510
L + ++Q + G YR ++ FD + +
Sbjct: 72 FELHITDAQPAFTGSYRCEVSTKDKFDCSNFN 103
Score = 42.7 bits (100), Expect = 1e-04
Identities = 16/97 (16%), Positives = 31/97 (31%), Gaps = 11/97 (11%)
Query: 1144 RDMTVLAGEEFTITVPFSGRP---KPTPIWT--VNGDEVSPDG-RIKFETSENQTIYRNK 1197
+D V G T + +G P W D S G ++ S ++
Sbjct: 12 QDGEVTVGGSITFSARVAGASLLKPPVVKWFKGKWVDLSSKVGQHLQLHDSYDRASKVYL 71
Query: 1198 S-----AKRATDSGSYTIQLVNTVGSDSASCKVYVVD 1229
+ +GSY ++ D ++ + V +
Sbjct: 72 FELHITDAQPAFTGSYRCEVSTKDKFDCSNFNLTVHE 108
Score = 41.1 bits (96), Expect = 4e-04
Identities = 15/97 (15%), Positives = 28/97 (28%), Gaps = 12/97 (12%)
Query: 190 PNALYIPEGDNTKVKIFYAGD---QPMEVS---------LTKNGRVVQSDDRFKFTVLDD 237
P + G + AG +P V +K G+ +Q D +
Sbjct: 11 PQDGEVTVGGSITFSARVAGASLLKPPVVKWFKGKWVDLSSKVGQHLQLHDSYDRASKVY 70
Query: 238 YIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINIT 274
+ I + + G Y +S F + +
Sbjct: 71 LFELHITDAQPAFTGSYRCEVSTKDKFDCSNFNLTVH 107
Score = 41.1 bits (96), Expect = 4e-04
Identities = 15/97 (15%), Positives = 28/97 (28%), Gaps = 12/97 (12%)
Query: 1797 PNALYIPEGDNTKVKIFYAGD---QPMEVS---------LTKNGRVVQSDDRFKFTVLDD 1844
P + G + AG +P V +K G+ +Q D +
Sbjct: 11 PQDGEVTVGGSITFSARVAGASLLKPPVVKWFKGKWVDLSSKVGQHLQLHDSYDRASKVY 70
Query: 1845 YIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINIT 1881
+ I + + G Y +S F + +
Sbjct: 71 LFELHITDAQPAFTGSYRCEVSTKDKFDCSNFNLTVH 107
>3g9v_A Interleukin 22 receptor, alpha 2; cytokine, cytokine receptor,
receptor, glycoprotein, polymorphism, secreted,
cytokine/cytokine receptor complex; 2.76A {Homo sapiens}
Length = 211
Score = 69.4 bits (169), Expect = 5e-13
Identities = 27/200 (13%), Positives = 43/200 (21%), Gaps = 20/200 (10%)
Query: 273 ITGLPGPPIGPLDVS-EITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWI----CI 327
P V + L W P + G + Y V+ + W C
Sbjct: 2 TQSTHESLK-PQRVQFQSRNFHNILQWQPGRALTGN-SSVYFVQYKIYGQRQWKNKEDCW 59
Query: 328 STTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVT 387
T + + Y V A + K PP + +
Sbjct: 60 GTQELSCDLTSETSDIQEPYYGRVRAASAGSYSEWSMTPRFTPWWET--KIDPPVMNITQ 117
Query: 388 QVGGDFVNLSW---------DKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQIN 438
G V L +K + Y + + Q+V +
Sbjct: 118 VNGSLLVILHAPNLPYRYQKEKNVSIEDYYELLYRVFIINNSLEKEQKVYEGAH--RAVE 175
Query: 439 IPNLIEGRQYEFRVYAQNEA 458
I L Y
Sbjct: 176 IEALTPHSSYCVVAEIYQPM 195
Score = 69.4 bits (169), Expect = 5e-13
Identities = 27/200 (13%), Positives = 43/200 (21%), Gaps = 20/200 (10%)
Query: 1880 ITGLPGPPIGPLDVS-EITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWI----CI 1934
P V + L W P + G + Y V+ + W C
Sbjct: 2 TQSTHESLK-PQRVQFQSRNFHNILQWQPGRALTGN-SSVYFVQYKIYGQRQWKNKEDCW 59
Query: 1935 STTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVT 1994
T + + Y V A + K PP + +
Sbjct: 60 GTQELSCDLTSETSDIQEPYYGRVRAASAGSYSEWSMTPRFTPWWET--KIDPPVMNITQ 117
Query: 1995 QVGGDFVNLSW---------DKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQIN 2045
G V L +K + Y + + Q+V +
Sbjct: 118 VNGSLLVILHAPNLPYRYQKEKNVSIEDYYELLYRVFIINNSLEKEQKVYEGAH--RAVE 175
Query: 2046 IPNLIEGRQYEFRVYAQNEA 2065
I L Y
Sbjct: 176 IEALTPHSSYCVVAEIYQPM 195
Score = 64.4 bits (156), Expect = 3e-11
Identities = 29/234 (12%), Positives = 51/234 (21%), Gaps = 57/234 (24%)
Query: 904 PPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTKVSS--YVTTPF-- 959
P+ + + L W P R G + Y V+ K Y W
Sbjct: 10 KPQRVQF-QSRNFHNILQWQPGRALTG-NSSVYFVQYKIYGQRQWKNKEDCWGTQELSCD 67
Query: 960 VRVRNLAIGSTYEFRVMAENQYGLSKPALTIDPIKAKHPFDVPGAPGAPKGVDSTEDSIS 1019
+ I Y RV A + S+ ++T + P + S+
Sbjct: 68 LTSETSDIQEPYYGRVRAASAGSYSEWSMTPRFTPWW---ETKIDPPVMN-ITQVNGSLL 123
Query: 1020 LVWSKPRHDGGSPIQR-----------YIVEKRLISDDKWIKASMAHIPDTSLKYVLWVS 1068
++ P ++ Y V S +K K +
Sbjct: 124 VILHAPNLPYRYQKEKNVSIEDYYELLYRVFIINNSLEKEQK----VYEGAHRAVEI--- 176
Query: 1069 EGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAA--GQGPWS 1120
+L + Y + S
Sbjct: 177 ---------------------------EALTPHSSYCVVAEIYQPMLDRRSQRS 203
Score = 51.3 bits (122), Expect = 7e-07
Identities = 19/102 (18%), Positives = 32/102 (31%), Gaps = 7/102 (6%)
Query: 669 RPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSWIRVG---NTRFT 725
PQ + ++ L W P N + Y V+ + + W T+
Sbjct: 7 ESLKPQRVQFQSRNFHNI-LQW-QPGRALTGNSSVYFVQYKIYGQRQWKNKEDCWGTQEL 64
Query: 726 TMAIT--GLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKDT 765
+ +T Y RV A + S+ S T +T
Sbjct: 65 SCDLTSETSDIQEPYYGRVRAASAGSYSEWSMTPRFTPWWET 106
Score = 47.1 bits (111), Expect = 2e-05
Identities = 24/167 (14%), Positives = 42/167 (25%), Gaps = 14/167 (8%)
Query: 1250 LSWKPPLDDGGSPITNYVVEKYESATGFWSKLSSF--VRSPAYDV--FGLETNRQYRFRV 1305
L W+P + Y V+ W + + D+ + Y RV
Sbjct: 25 LQWQPG-RALTGNSSVYFVQYKIYGQRQWKNKEDCWGTQELSCDLTSETSDIQEPYYGRV 83
Query: 1306 RAENQYGVSEPLELDNSITAKFPFTVPDPPGQPQIVDWDTNNATLMWDRPRTDGGSKIQG 1365
RA + SE T DPP + + ++ P + Q
Sbjct: 84 RAASAGSYSEWSMTPRFTPWW--ETKIDPPVMN--ITQVNGSLLVILHAPNLPY--RYQK 137
Query: 1366 YKMLLKTPTGELPTTIWSKIRPTSSTVYCKDTTMNS---SNSEPGKQ 1409
K + EL ++ + + P
Sbjct: 138 EKNVSIEDYYELLYRVFIINNSLEKEQKVYEGAHRAVEIEALTPHSS 184
Score = 42.8 bits (100), Expect = 5e-04
Identities = 20/122 (16%), Positives = 31/122 (25%), Gaps = 10/122 (8%)
Query: 22 YIIERREVGGAIWLK---CNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPSICTT 78
Y ++ + G W C L C + Y R+ A +A S T
Sbjct: 40 YFVQYKIYGQRQWKNKEDCWGTQELSCDLTSETSDIQEPYYGRVRAASAGSYS-EWSMTP 98
Query: 79 PVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYR 138
+ P + + L + A P + E YR
Sbjct: 99 RFTPWWETKIDPPVMN------ITQVNGSLLVILHAPNLPYRYQKEKNVSIEDYYELLYR 152
Query: 139 VE 140
V
Sbjct: 153 VF 154
Score = 39.8 bits (92), Expect = 0.004
Identities = 24/189 (12%), Positives = 37/189 (19%), Gaps = 50/189 (26%)
Query: 1559 VDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEG 1618
S L W +P Y V+ ++ +W
Sbjct: 16 FQSRNFHNILQW-QPGRALTGNSSVYFVQYKIYGQRQWKNKE------------------ 56
Query: 1619 KSIGSERGSTAQFLEREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKS 1678
C L C + Y R+ A +A S
Sbjct: 57 ------------------------DCWGTQELSCDLTSETSDIQEPYYGRVRAASAGSYS 92
Query: 1679 EPSICTTPVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREI 1738
T + P + + L + A P + E
Sbjct: 93 -EWSMTPRFTPWWETKIDPPVMN------ITQVNGSLLVILHAPNLPYRYQKEKNVSIED 145
Query: 1739 SSGARYRVE 1747
YRV
Sbjct: 146 YYELLYRVF 154
Score = 39.0 bits (90), Expect = 0.010
Identities = 20/126 (15%), Positives = 38/126 (30%), Gaps = 14/126 (11%)
Query: 648 RVVAENDLGMDSAIVKIQISDRPDPPQFPTVEDI--GHDSLALVWRAP----IWDGGSNI 701
RV A + + + + + P V +I + SL ++ AP + N+
Sbjct: 82 RVRAASAGSYSEWSMTPRFTPWWETKIDPPVMNITQVNGSLLVILHAPNLPYRYQKEKNV 141
Query: 702 T-------NYIVEKREHPMSSWIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPS 754
+ Y V + + +V + I L+P Y S
Sbjct: 142 SIEDYYELLYRVFIINNSLEKEQKVYEGAHRAVEIEALTPHSSYCVVAEIYQ-PMLDRRS 200
Query: 755 TTSDLI 760
S+
Sbjct: 201 QRSEER 206
Score = 35.1 bits (80), Expect = 0.16
Identities = 14/113 (12%), Positives = 27/113 (23%), Gaps = 15/113 (13%)
Query: 260 NSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTH-------- 311
S S++ FT PP+ + + + + P +
Sbjct: 91 YSEWSMTPRFTPWWETKIDPPVMNITQVN---GSLLVILHAPNLPYRYQKEKNVSIEDYY 147
Query: 312 ---YVVERRDISMPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGP 361
Y V + S+ + H ++ LT Y
Sbjct: 148 ELLYRVFIINNSLEKEQKVYEGAH-RAVEIEALTPHSSYCVVAEIYQPMLDRR 199
Score = 35.1 bits (80), Expect = 0.16
Identities = 14/113 (12%), Positives = 27/113 (23%), Gaps = 15/113 (13%)
Query: 1867 NSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTH-------- 1918
S S++ FT PP+ + + + + P +
Sbjct: 91 YSEWSMTPRFTPWWETKIDPPVMNITQVN---GSLLVILHAPNLPYRYQKEKNVSIEDYY 147
Query: 1919 ---YVVERRDISMPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGP 1968
Y V + S+ + H ++ LT Y
Sbjct: 148 ELLYRVFIINNSLEKEQKVYEGAH-RAVEIEALTPHSSYCVVAEIYQPMLDRR 199
Score = 32.8 bits (74), Expect = 0.92
Identities = 26/200 (13%), Positives = 45/200 (22%), Gaps = 47/200 (23%)
Query: 1004 APGAPKGV--DSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSL 1061
P+ V S L W +P Y V+ ++ +W L
Sbjct: 7 ESLKPQRVQFQSRNFHNILQW-QPGRALTGNSSVYFVQYKIYGQRQWKNKE-DCWGTQEL 64
Query: 1062 KYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPWSS 1121
L T++ ++ Y RV A +A WS
Sbjct: 65 SCDL--------------TSETSDI--------------QEPYYGRVRAASAGSYSEWSM 96
Query: 1122 SSDIIMCC-APPCAPKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPD 1180
+ P + + ++ V + E +
Sbjct: 97 TPRFTPWWETKIDPPVMN----------ITQVNGSLLVIL----HAPNLPYRYQKEKNVS 142
Query: 1181 GRIKFETSENQTIYRNKSAK 1200
+E I N K
Sbjct: 143 IEDYYELLYRVFIINNSLEK 162
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics,
structural genomics consortium, SGC, TR; HET: STU; 2.29A
{Homo sapiens}
Length = 384
Score = 72.4 bits (178), Expect = 5e-13
Identities = 32/97 (32%), Positives = 54/97 (55%), Gaps = 6/97 (6%)
Query: 807 VPQPVDIKTSSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEK---EL 863
+P D +DH++IL IG G+FG V ++ T ++A K++ +E+
Sbjct: 2 MPPVFDENEDVNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRN 61
Query: 864 IRKEIDIMNQLHHPKLINLHDAFEDDDEMVLIFEVLD 900
+ KE+ IM L HP L+NL +F+D+++M F V+D
Sbjct: 62 VFKELQIMQGLEHPFLVNLWYSFQDEEDM---FMVVD 95
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET:
824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A*
3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Length = 289
Score = 70.4 bits (173), Expect = 7e-13
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 816 SSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFI--PVSHNLEKELIRKEIDIMNQ 873
S + LE+IG+G FG V +C +R G I+A K P++ +++++ +E+
Sbjct: 7 SRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAV 66
Query: 874 L-HHPKLINLHDAFEDDDEMVLIFE 897
L H ++ A+ +DD M++ E
Sbjct: 67 LGQHSHVVRYFSAWAEDDHMLIQNE 91
>2ocf_D Fibronectin; estrogen receptor, LBD, monobody, estradiol,
hormone-growth complex; HET: CME EST; 2.95A {Homo
sapiens}
Length = 121
Score = 66.5 bits (162), Expect = 7e-13
Identities = 23/100 (23%), Positives = 33/100 (33%), Gaps = 8/100 (8%)
Query: 667 SDRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSW---IRVGNTR 723
D P V SL + W AP + Y + E +S V ++
Sbjct: 26 GSVSDVPTKLEVVAATPTSLLISWDAP----AVTVRYYRITYGETGGNSPVQEFTVPGSK 81
Query: 724 FTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTK 763
+T I+GL PG Y VYA + I +
Sbjct: 82 -STATISGLKPGVDYTITVYAVTGLRLMLAGSKPISINYR 120
Score = 65.7 bits (160), Expect = 1e-12
Identities = 23/127 (18%), Positives = 35/127 (27%), Gaps = 11/127 (8%)
Query: 345 QEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDD 404
+ H ++ P V + +SWD P
Sbjct: 3 HHHHHHSSDYKDDDDKGEN-------LYFQGSVSDVPTKLEVVAATPTSLLISWDAP--- 52
Query: 405 GGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPS 464
++ Y I E G ++ + + S I L G Y VYA L L
Sbjct: 53 -AVTVRYYRITYGETGGNSPVQEFTVPGSKSTATISGLKPGVDYTITVYAVTGLRLMLAG 111
Query: 465 SASNSVQ 471
S S+
Sbjct: 112 SKPISIN 118
Score = 65.7 bits (160), Expect = 1e-12
Identities = 23/127 (18%), Positives = 35/127 (27%), Gaps = 11/127 (8%)
Query: 1952 QEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDD 2011
+ H ++ P V + +SWD P
Sbjct: 3 HHHHHHSSDYKDDDDKGEN-------LYFQGSVSDVPTKLEVVAATPTSLLISWDAP--- 52
Query: 2012 GGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPS 2071
++ Y I E G ++ + + S I L G Y VYA L L
Sbjct: 53 -AVTVRYYRITYGETGGNSPVQEFTVPGSKSTATISGLKPGVDYTITVYAVTGLRLMLAG 111
Query: 2072 SASNSVQ 2078
S S+
Sbjct: 112 SKPISIN 118
Score = 60.7 bits (147), Expect = 7e-11
Identities = 20/98 (20%), Positives = 28/98 (28%), Gaps = 8/98 (8%)
Query: 1231 PSPPQGPLDVSDITPESCSLSWKPPLDDGGSPITNYVVEKYESATGFWSKLSSFVRSPA- 1289
P L+V TP S +SW P + Y + Y G V
Sbjct: 29 SDVPTK-LEVVAATPTSLLISWDAP----AVTVRYYRIT-YGETGGNSPVQEFTVPGSKS 82
Query: 1290 -YDVFGLETNRQYRFRVRAENQYGVSEPLELDNSITAK 1326
+ GL+ Y V A + SI +
Sbjct: 83 TATISGLKPGVDYTITVYAVTGLRLMLAGSKPISINYR 120
Score = 58.4 bits (141), Expect = 5e-10
Identities = 17/98 (17%), Positives = 32/98 (32%), Gaps = 6/98 (6%)
Query: 266 SGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWI 325
G + P L+V T + + W+ P + V +Y + + +
Sbjct: 18 KGENLYFQGSVSDVPTK-LEVVAATPTSLLISWDAP----AVTVRYYRITYGETGGNSPV 72
Query: 326 -CISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPP 362
+ +T + GL G +Y V AV +
Sbjct: 73 QEFTVPGSKSTATISGLKPGVDYTITVYAVTGLRLMLA 110
Score = 58.4 bits (141), Expect = 5e-10
Identities = 17/98 (17%), Positives = 32/98 (32%), Gaps = 6/98 (6%)
Query: 1873 SGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWI 1932
G + P L+V T + + W+ P + V +Y + + +
Sbjct: 18 KGENLYFQGSVSDVPTK-LEVVAATPTSLLISWDAP----AVTVRYYRITYGETGGNSPV 72
Query: 1933 -CISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPP 1969
+ +T + GL G +Y V AV +
Sbjct: 73 QEFTVPGSKSTATISGLKPGVDYTITVYAVTGLRLMLA 110
Score = 53.7 bits (129), Expect = 2e-08
Identities = 15/89 (16%), Positives = 22/89 (24%), Gaps = 9/89 (10%)
Query: 902 PHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTK---VSSYVTTP 958
P L SL + W P + Y + + + V +T
Sbjct: 29 SDVPTKLEVVAATPTSLLISWDAPA----VTVRYYRITYGETGGNSPVQEFTVPGSKST- 83
Query: 959 FVRVRNLAIGSTYEFRVMAENQYGLSKPA 987
+ L G Y V A L
Sbjct: 84 -ATISGLKPGVDYTITVYAVTGLRLMLAG 111
Score = 51.0 bits (122), Expect = 2e-07
Identities = 15/153 (9%), Positives = 31/153 (20%), Gaps = 43/153 (28%)
Query: 971 YEFRVMAENQYGLSKPALTIDPIKAKHPFDVPGAPGAPKGVDSTEDSISLVWSKPRHDGG 1030
+ L V P + V +T S+ + W P
Sbjct: 5 HHHHSSDYKDDDDKGENLYF-------QGSVSDVPTKLEVVAATPTSLLISWDAPA---- 53
Query: 1031 SPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEGKSIGSERGSTAQFLELLLMF 1090
++ Y + + ++ ++
Sbjct: 54 VTVRYYRITYGETGGNSPVQEFTVPGSKSTA----------------------------- 84
Query: 1091 IPNRVTSLIENHEYEFRVCAVNAAGQGPWSSSS 1123
++ L +Y V AV S
Sbjct: 85 ---TISGLKPGVDYTITVYAVTGLRLMLAGSKP 114
Score = 36.0 bits (83), Expect = 0.027
Identities = 13/63 (20%), Positives = 23/63 (36%), Gaps = 2/63 (3%)
Query: 20 DCYIIERREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPSICTTP 79
Y I E GG ++ + + ++ L G DY + AV + + P
Sbjct: 57 RYYRITYGETGGNSPVQEFTVPGSKSTATISGLKPGVDYTITVYAVTGLRLMLAG--SKP 114
Query: 80 VKI 82
+ I
Sbjct: 115 ISI 117
Score = 33.7 bits (77), Expect = 0.19
Identities = 17/131 (12%), Positives = 35/131 (26%), Gaps = 51/131 (38%)
Query: 1559 VDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEG 1618
V +T S+ + W P ++ Y + + ++
Sbjct: 38 VAATPTSLLISWDAPA----VTVRYYRITYGETGGNSPVQ-------------------- 73
Query: 1619 KSIGSERGSTAQFLEREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKS 1678
E V G+ + + ++ L G DY + AV +
Sbjct: 74 --------------EFTVPGS-----------KSTATISGLKPGVDYTITVYAVTGLRLM 108
Query: 1679 EPSICTTPVKI 1689
+ P+ I
Sbjct: 109 LAG--SKPISI 117
Score = 32.2 bits (73), Expect = 0.57
Identities = 9/69 (13%), Positives = 19/69 (27%), Gaps = 11/69 (15%)
Query: 1299 RQYRFRVRAENQYGVSEPLELDNSITAKFPFTVPDPPGQPQIVDWDTNNATLMWDRPRTD 1358
+ F +V D P + ++V + + WD P
Sbjct: 3 HHHHHHSSDYKDDDDKGE-------NLYFQGSVSDVPTKLEVVAATPTSLLISWDAPA-- 53
Query: 1359 GGSKIQGYK 1367
++ Y+
Sbjct: 54 --VTVRYYR 60
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 73.7 bits (180), Expect = 7e-13
Identities = 70/582 (12%), Positives = 152/582 (26%), Gaps = 138/582 (23%)
Query: 603 YPKPKITWYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAPYRVVAENDLGMDSAIV 662
PK ++ + +I S + T+ + E L ++ +
Sbjct: 41 MPKSILSKEEIDHIIMSK---DAVSGTLRLFWTLLSKQE---EMVQKFVEEVLRINYKFL 94
Query: 663 KIQISDRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPM--------- 713
I P T I R +++ Y V R P
Sbjct: 95 MSPIKTEQRQPSMMTRMYIEQ-------RDRLYNDNQVFAKYNV-SRLQPYLKLRQALLE 146
Query: 714 ---SSWIRV------GNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKD 764
+ + + G T + +F+++ N+ + + ++
Sbjct: 147 LRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNL-KNCN--SPETVLEMLQ 203
Query: 765 TFKKQIKKRQYDFDETGKKIRGKADEKVSDYDQYVF-------------DIYSKYVPQPV 811
QI + I+ + + + + ++ +
Sbjct: 204 KLLYQIDPNWTSRSDHSSNIKLRIHS-IQAELRRLLKSKPYENCLLVLLNVQNAKAWNAF 262
Query: 812 DIK-----TSSVYDHYDILEEIGTGAFGVVHRCR---ERKTGNIFAAKFI---------- 853
++ T+ D L T + H + ++ K++
Sbjct: 263 NLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLL-KYLDCRPQDLPRE 321
Query: 854 -----PVSHNLEKELIRKEIDIMNQLHHPKLINLHDAFE------DDDEM------VLIF 896
P ++ E IR + + H L E + E + +F
Sbjct: 322 VLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVF 381
Query: 897 EVLDRPHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTKVSSYVT 956
P + H L+L W + + N + + K S+
Sbjct: 382 --------PPSAHIPT---ILLSLIWFDVIKSDVMVVVNKLHKYSLVEK--QPKESTI-- 426
Query: 957 TPFVRVRNLAIGSTYEFRVMAENQYGLSKPALTIDPIKAKHPFDVPGAPGAPKGVDSTED 1016
+ ++ + E +V EN+Y L + + I D P D
Sbjct: 427 ----SIPSIYL----ELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPP--------YLD 470
Query: 1017 SISLVWSKPRH-DGGSPIQRYIVEKRLISDDKWIKASMAH----------IPDTSL---K 1062
H +R + + + D ++++ + H I +T
Sbjct: 471 QYFY-SHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKF 529
Query: 1063 YVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEY 1104
Y I + + +L F+P +LI +Y
Sbjct: 530 Y------KPYICDNDPKYERLVNAILDFLPKIEENLI-CSKY 564
Score = 60.6 bits (146), Expect = 7e-09
Identities = 59/447 (13%), Positives = 131/447 (29%), Gaps = 155/447 (34%)
Query: 745 ENVYGRSDPSTTSD-LITTKDTFKKQIKKR------QYDFDETGKKIRGKADEKVSDYDQ 797
+++ D + + L T + ++++ ++ + ++ I+ + +
Sbjct: 52 DHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRM 111
Query: 798 YVF---------DIYSKY-VP--QPVD-IKTSSVYDHYDILEEI---------GTGAFG- 834
Y+ +++KY V QP ++ + L E+ G G
Sbjct: 112 YIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQA--------LLELRPAKNVLIDGVLGSGK 163
Query: 835 ---VVHRCRERKT-----GNIFAAKFIPVSHNLEKELIRKEIDIMNQLHH---PKLINLH 883
+ C K IF ++ + + E + ++++ +L + P +
Sbjct: 164 TWVALDVCLSYKVQCKMDFKIF---WLNLKNCNSPETV---LEMLQKLLYQIDPNWTSRS 217
Query: 884 DAFEDDDEMVLIFEVLDRPHPPENLHADEFAGDSLTLYWTPPR-----DNGGSEITNYVV 938
D + +H+ + L N V
Sbjct: 218 DHSS---------------NIKLRIHSIQAELRRLLKSKPYENCLLVLLN---------V 253
Query: 939 EKKDYNSTVWT------KVSSYVTTPFVRVRNLAIGSTYEFRVMAENQYGLSKP---ALT 989
N+ W K+ +TT F +V + +T + + L+ +L
Sbjct: 254 ----QNAKAWNAFNLSCKI--LLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLL 307
Query: 990 IDPIKAKHPFDVP-----GAPGAPKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLIS 1044
+ + + P D+P P +S++ R DG + + K +
Sbjct: 308 LKYLDCR-PQDLPREVLTTNPRR----------LSIIAESIR-DGLATWDNW---KHVNC 352
Query: 1045 D--DKWIKASM---------------------AHIPDTSLKYVLWVSEGKSIGSERGSTA 1081
D I++S+ AHIP L ++W +
Sbjct: 353 DKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLS-LIW-FDVIKSDVM----- 405
Query: 1082 QFLELLLMFIPNRVTSLIENHEYEFRV 1108
+ L SL+E E +
Sbjct: 406 VVVNKLH----KY--SLVEKQPKESTI 426
Score = 48.7 bits (115), Expect = 3e-05
Identities = 68/555 (12%), Positives = 156/555 (28%), Gaps = 153/555 (27%)
Query: 436 QINIPNLIEGRQYEFRVYAQNEAG-LSLPSSASNSVQIKDPMAAKAPEIIVPLRNA-NAI 493
+IN L+ + E R + + N Q+ + + LR A +
Sbjct: 88 RINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLEL 147
Query: 494 QNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVC 553
+ + G K +W+ +Y + + + +
Sbjct: 148 RPAKNVLIDGVLGSGK---TWVALD-----VCL--------SYKVQCKMDFKI----F-- 185
Query: 554 RAVNKGGVKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFT-----------G 602
+N S + L ++ + + P + T+ D N+ ++I
Sbjct: 186 -WLNLKNCNSPETVLEMLQKLLYQIDPNW--TSRSDHSSNIKLRIHSIQAELRRLLKSKP 242
Query: 603 YPKPKI----TWYRDNEVIESGGHFHVE--TSERHAILTIRDASNVD-----TAPYRVVA 651
Y + + + + F++ +LT R D T + +
Sbjct: 243 YENCLLVLLNVQ--NAKAWNA---FNLSCKI-----LLTTRFKQVTDFLSAATTTHISLD 292
Query: 652 ENDLGMD--------SAIVKIQISDRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITN 703
+ + + + + D P + V L+++
Sbjct: 293 HHSMTLTPDEVKSLLLKYLDCRPQD--LPRE---VLTTNPRRLSIIAE------------ 335
Query: 704 YIVEKREHPMSS--WIRVGNTRFTT---MAITGLSPG---HQYE-FRVYAENVYGRSDPS 754
R+ + W V + TT ++ L P ++ V+ + +
Sbjct: 336 ---SIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAH------ 386
Query: 755 TTSDLITTKDTFKKQI---KKRQYDFDETGKKIRGK--ADEKVSDYDQYVFDIYSKYVPQ 809
I T + + D K+ +++ + + IY + +
Sbjct: 387 -----IPTI-LL--SLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVK 438
Query: 810 PVDIKT--SSVYDHYDILEEIGTGAFGVV------------H--RCRERKTGNIFAAKFI 853
+ S+ DHY+I + + H + +F F+
Sbjct: 439 LENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFL 498
Query: 854 PVSHN---LEKELIRKEI---------DIMNQLH-HPKLINLHDAFEDDDEMV-LIFEVL 899
+ LE+++ + + QL + I +D + +V I + L
Sbjct: 499 ----DFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDND--PKYERLVNAILDFL 552
Query: 900 DRPHPPENLHADEFA 914
P ENL ++
Sbjct: 553 --PKIEENLICSKYT 565
Score = 47.2 bits (111), Expect = 7e-05
Identities = 75/539 (13%), Positives = 143/539 (26%), Gaps = 213/539 (39%)
Query: 527 HHIFAEGDTYTLIINSVYGVDADEYV----CRAVN---KGGVKSTKAELIIMTAPKFNVP 579
HH+ E + + V D +V C+ V K + + + II
Sbjct: 5 HHMDFETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHII------MSK 58
Query: 580 PRFRDTAYF-----DKGENVVVKIPFTG------Y-------------PKPKITWY---- 611
T K E +V K F Y P Y
Sbjct: 59 DAVSGTLRLFWTLLSKQEEMVQK--FVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQR 116
Query: 612 ----RDNEVIESGGHFHVETSE-----RHAILTIRDASNV---------------DTA-P 646
DN+V ++V + R A+L +R A NV D
Sbjct: 117 DRLYNDNQVFAK---YNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLS 173
Query: 647 YRVVAENDLGM----------DSAIVKI-------------QISDRPDPPQFPTVEDIGH 683
Y+V + D + ++++ SD +
Sbjct: 174 YKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAE 233
Query: 684 DS------------LAL--VWRAPIW---DGG---------SNITNYI-VEKREHPMSSW 716
L L V A W + +T+++ H
Sbjct: 234 LRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDH 293
Query: 717 IRVGNT---------RFTTMAITGLSP----GHQYEFRVYAENVYGRSDPSTTSDLITTK 763
+ T ++ L + + AE++ R +T
Sbjct: 294 HSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESI--RDGLATW------- 344
Query: 764 DTFKKQIKKRQYDFDETGKKIRGKADEKVSDYDQYVFDIYSKYVPQPVDIKTSSVYDHYD 823
D +K + D+ I S + +P + + +D
Sbjct: 345 DNWK------HVNCDKLTTIIE-------SSLNVL----------EPAEYR-----KMFD 376
Query: 824 ILEEIGTGAFGVVHRCRERKTGNIF--AAKFIPVSHNLE---KELIRKEI-DIMNQLHHP 877
L +F +A IP + L ++I+ ++ ++N+LH
Sbjct: 377 RLS--------------------VFPPSAH-IP-TILLSLIWFDVIKSDVMVVVNKLHKY 414
Query: 878 KLIN---------LHDAFED-----DDEMVLIFEVLDRPHPPENLHADEFAGDSLTLYW 922
L+ + + + ++E L ++D + P+ +D+ L Y+
Sbjct: 415 SLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYF 473
Score = 45.6 bits (107), Expect = 2e-04
Identities = 113/740 (15%), Positives = 207/740 (27%), Gaps = 247/740 (33%)
Query: 976 MAENQYGLSK--PALTIDPIKAKHPFDVPGAPGAPKGVDSTEDSISLVWSKPRHDG---- 1029
E+QY D FD PK + S E+ ++ SK G
Sbjct: 11 TGEHQYQYKDILSVF-EDAFVDN--FDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRL 67
Query: 1030 -------GSPIQRYIVEKRLISDDKWIKASMAHIP-DTSLKYVLWVSEGKSIGSERGSTA 1081
+ + VE+ L + K++ + + S+ +++ + + +
Sbjct: 68 FWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRL----YNDN 123
Query: 1082 QFLELLLMFIPNRVTSL-----IENHEYEFR----VCAVNAAGQGPWSSSSDIIMCCAPP 1132
Q +F V+ L + E R V G G
Sbjct: 124 Q------VFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSG--------------- 162
Query: 1133 CAPKITSDLSIRDMTVLAGE---EFTITVPFSGRPKPTPI-WTVNGDEVSPDGRIKFETS 1188
K T +A + + + + I W + SP+ ++
Sbjct: 163 ---K----------TWVALDVCLSYKVQCKMDFK-----IFWLNLKNCNSPETVLE---M 201
Query: 1189 ENQTIYRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYVVDKPSPPQGPLDVSDITPESC 1248
+ +Y+ + S I+L + S A + + KP L V
Sbjct: 202 LQKLLYQIDPNWTSRSDHSSNIKL--RIHSIQAELRRLLKSKPYENC--LLV-------- 249
Query: 1249 SLSWKPPLDDGGSPITNYVVEKYESATGFWSKLSSFVRSP-AYDVFGLE-----TNR--- 1299
L + V++ A++ F L T R
Sbjct: 250 -------LLN--------------------------VQNAKAWNAFNLSCKILLTTRFKQ 276
Query: 1300 -------QYRFRVRAENQYGVSEPLELDNSIT--AKFPFTVPD--PP----GQPQIVDWD 1344
+ ++ S L D + K+ P P P+ +
Sbjct: 277 VTDFLSAATTTHISLDH---HSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRL--- 330
Query: 1345 TNNATLMWDRPRTDGGSKIQGYKMLLKTPTGELPTTIWSKIRPTSSTVYCKDTTMNSSNS 1404
+++ + R DG + +K + +L T I S + +
Sbjct: 331 ----SIIAESIR-DGLATWDNWKHVNCD---KLTTIIESSL----------------NVL 366
Query: 1405 EPGKQSGPVIVEEQPNKPVMDLSGVRDITVKAGEDFSIHVPFMAFPQPAAFWFANDSIID 1464
EP E + LS S H+P + + W D I
Sbjct: 367 EPA--------EYRKM--FDRLSVFPP---------SAHIPTILL---SLIW--FDVIKS 402
Query: 1465 DSDTRVHKQLTMNSASLVVKNSQRS----DGGQYRLQLKNPAGFDTATLHSRLRTLPDSV 1520
D V+K ++ SLV K + S L++K + LH + D
Sbjct: 403 DVMVVVNK---LHKYSLVEKQPKESTISIPSIYLELKVKLE---NEYALHRSIV---DHY 453
Query: 1521 N-PRCHLPSSTSKERPK--FPTH-PNHQPWLKWARASLTSKGVDSTEDSISLVW--SKPR 1574
N P+ F +H +H LK + + + K R
Sbjct: 454 NIPKTFDSDDLIPPYLDQYFYSHIGHH---LK--NIEHPERMTLFRMVFLDFRFLEQKIR 508
Query: 1575 HDG------GSPI---------QRYIVEK-----RLISD-DKWIKASMAHI---PDTSLK 1610
HD GS + + YI + RL++ ++ ++ T L
Sbjct: 509 HDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKIEENLICSKYTDLL 568
Query: 1611 YVLWVSEGKSIGSERGSTAQ 1630
+ ++E ++I E Q
Sbjct: 569 RIALMAEDEAIFEEAHKQVQ 588
Score = 45.2 bits (106), Expect = 3e-04
Identities = 72/502 (14%), Positives = 139/502 (27%), Gaps = 146/502 (29%)
Query: 1183 IKFETSENQTIYRN------KSAKRATDSGSYTIQLVNTVGSDSASCKVYVVDKPSPPQG 1236
+ FET E+Q Y++ + D + ++ S +++ G
Sbjct: 7 MDFETGEHQYQYKDILSVFEDAFVDNFDC-KDVQDMPKSILS-KEEID-HIIMSKDAVSG 63
Query: 1237 PLDVSDITPESCSLSWKPPLDDGGSPITNYVVEKYESATGF-WSKLSSFVRSPA--YDVF 1293
L + L + +V E F S + + R P+ ++
Sbjct: 64 TLRLFWTL-----------LSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMY 112
Query: 1294 GLETNRQYRFRVRAENQYGVSEPLELDNSITAKFPFTVPDPPGQPQIVDWDTNNATLMWD 1353
+ +R Y DN + AK+ V ++ L+
Sbjct: 113 IEQRDRLYN-----------------DNQVFAKYN--VSRLQPYLKLRQA------LLEL 147
Query: 1354 RPRTD------GGS-K-------IQGYKMLLKTPTG----------------ELPTTIWS 1383
RP + GS K YK+ K E+ +
Sbjct: 148 RPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLY 207
Query: 1384 KIRPTSSTVYCKDTTMNSSNSEPGKQSGPVIVEEQPNKP---VMDLSGVRDI-TVKAGED 1439
+I P + T ++ + +++ +P + V+ V++ A
Sbjct: 208 QIDP-NWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLL--NVQNAKAWNA--- 261
Query: 1440 FSIHVPFMAFPQPAAFWFANDSIID--DSDTRVHKQLTMNSASLVVKNSQRSDGGQYRLQ 1497
F++ + + + D + T H L +S +L + L
Sbjct: 262 FNLSCKILLTTR-------FKQVTDFLSAATTTHISLDHHSMTLTPDEVK-------SLL 307
Query: 1498 LKNPAGFDTATLHSRLRTLP---DSVNPRCHLPSSTSKERPKFPTHPNHQPWLKWARASL 1554
LK L R + LP + NPR S ++ ++ W L
Sbjct: 308 LKY--------LDCRPQDLPREVLTTNPR--RLSIIAESIRDGLATWDN--WKHVNCDKL 355
Query: 1555 TS-------------------------KGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKR 1589
T+ +SL+W + + +
Sbjct: 356 TTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYS 415
Query: 1590 LISDDKWIKASMAHIPDTSLKY 1611
L+ +K K S IP L+
Sbjct: 416 LV--EKQPKESTISIPSIYLEL 435
Score = 41.4 bits (96), Expect = 0.004
Identities = 53/362 (14%), Positives = 102/362 (28%), Gaps = 102/362 (28%)
Query: 1381 IWSKIR--------PTSSTVYCKDTTMNSSNS---------EPGKQSGPVIVEEQPN--- 1420
+ S I+ T + +D N + +P + ++E +P
Sbjct: 94 LMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNV 153
Query: 1421 ---------KPVMDLSGVRDITVKAGEDFSIHVPFMAFPQPAAFW--FAN----DSIIDD 1465
K + L V+ DF I FW N +++++
Sbjct: 154 LIDGVLGSGKTWVALDVCLSYKVQCKMDFKI------------FWLNLKNCNSPETVLEM 201
Query: 1466 SDTRVHKQLTMNSASLV---VKNSQRSDGGQYRLQ--LKNP------------------A 1502
++ Q+ N S R Q L+ LK+
Sbjct: 202 LQKLLY-QIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWN 260
Query: 1503 GFDTA--TL-HSRLRTLPDSVNPRCHLPSSTSKERPKFPTHPNHQP----WLKWARASLT 1555
F+ + L +R + + D ++ S T + +L L
Sbjct: 261 AFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTL-TPDEVKSLLLKYLDCRPQDLP 319
Query: 1556 SKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISD--DKWIKASMAHIPDTSLK--Y 1611
+ + + +S++ R DG + + K + D I++S+ + + +
Sbjct: 320 REVLTTNPRRLSIIAESIR-DGLATWDNW---KHVNCDKLTTIIESSLNVLEPAEYRKMF 375
Query: 1612 V-LWV-SEGKSIGSERGSTAQFLEREVGGAIWLKCNDYNVLE--CSFSVLNLVEGNDYEF 1667
L V I L IW +V+ +LVE E
Sbjct: 376 DRLSVFPPSAHI------PTILLSL-----IWFDVIKSDVMVVVNKLHKYSLVEKQPKES 424
Query: 1668 RI 1669
I
Sbjct: 425 TI 426
>3lb6_C IL-13, interleukin-13 receptor subunit alpha-2; cytokine, decoy,
decoy receptor, glycoprotein; HET: MLY NAG; 3.05A {Homo
sapiens} PDB: 3lb6_D*
Length = 380
Score = 71.8 bits (175), Expect = 7e-13
Identities = 28/181 (15%), Positives = 48/181 (26%), Gaps = 15/181 (8%)
Query: 279 PPIGPLDVSEITK--HTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICI-----STTC 331
P D+ + W P L + + + C+
Sbjct: 136 PETXVQDMDCVYYNWQYLLCSWKPGI-GVLLDTNYNLFYWYEGLDHALQCVDYIKADGQN 194
Query: 332 HDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGG 391
F ++ +++ V +EN ++ KP PP T+
Sbjct: 195 IGCRFPYLEASDYKDFYICVNGSSENKPIRSSYFTFQLQN---IVKPLPPVYLTFTRESS 251
Query: 392 DFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFR 451
+ L W PL +R Y I+ E + + E RQ F
Sbjct: 252 CEIKLKWSIPLGPIPARCFDYEIEIREDDTTLVTATVEN----ETYTLKTTNETRQLCFV 307
Query: 452 V 452
V
Sbjct: 308 V 308
Score = 71.8 bits (175), Expect = 7e-13
Identities = 28/181 (15%), Positives = 48/181 (26%), Gaps = 15/181 (8%)
Query: 1886 PPIGPLDVSEITK--HTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICI-----STTC 1938
P D+ + W P L + + + C+
Sbjct: 136 PETXVQDMDCVYYNWQYLLCSWKPGI-GVLLDTNYNLFYWYEGLDHALQCVDYIKADGQN 194
Query: 1939 HDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGG 1998
F ++ +++ V +EN ++ KP PP T+
Sbjct: 195 IGCRFPYLEASDYKDFYICVNGSSENKPIRSSYFTFQLQN---IVKPLPPVYLTFTRESS 251
Query: 1999 DFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFR 2058
+ L W PL +R Y I+ E + + E RQ F
Sbjct: 252 CEIKLKWSIPLGPIPARCFDYEIEIREDDTTLVTATVEN----ETYTLKTTNETRQLCFV 307
Query: 2059 V 2059
V
Sbjct: 308 V 308
Score = 65.6 bits (159), Expect = 7e-11
Identities = 27/252 (10%), Positives = 56/252 (22%), Gaps = 50/252 (19%)
Query: 901 RPHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTKVSSYVTTPFV 960
+++ + L W P TNY + + Y+
Sbjct: 136 PETXVQDMDCVYYNWQYLLCSWKPGIGVLLD--TNYNLFYWYEGLDHALQCVDYIKADGQ 193
Query: 961 RVR------NLAIGSTYEFRVMAENQYGLSKPALTIDPIKAKHPFDVPGAPGAPKGVDST 1014
+ + + V ++ + + ++ P +
Sbjct: 194 NIGCRFPYLEASDYKDFYICVNGSSENKPIRSSYFTFQLQNIVKPL---PPVYLTFTRES 250
Query: 1015 EDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEGKSIG 1074
I L WS P + Y +E R A + + +
Sbjct: 251 SCEIKLKWSIPLGPIPARCFDYEIEIREDDTTLV----TATVENETYT------------ 294
Query: 1075 SERGSTAQFLELLLMFIPNRVTSLIENHEYEFRV---CAVNAAGQGPWSSSSDIIMCCAP 1131
+ + E + F V + + G WS SD
Sbjct: 295 --------------------LKTTNETRQLCFVVRSKVNIYCSDDGIWSEWSDKQCWEGE 334
Query: 1132 PCAPKITSDLSI 1143
+ K +
Sbjct: 335 DLSKKTLLRFWL 346
Score = 59.4 bits (143), Expect = 7e-09
Identities = 37/241 (15%), Positives = 68/241 (28%), Gaps = 18/241 (7%)
Query: 254 YTVNLSNSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLK--VTH 311
YT +S + G T + + PP V L W PP K
Sbjct: 12 YTFLISTTFGC---TSSSDTEIKVNPPQDFEIVDPGYLGYLYLQWQPPLSLDHFKECTVE 68
Query: 312 YVVERRDISMPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKA 371
Y ++ R+I W I T + L +G E H + + G ++
Sbjct: 69 YELKYRNIGSETWKTIITK-NLHYKDGFDLNKGIEAXIHTLLPWQCTNGSEVQSSWAETT 127
Query: 372 KSPYDKPSPPGIPVVTQ---VGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVN 428
+ P ++ SW + Y + G D +
Sbjct: 128 YWISPQGIPETXVQDMDCVYYNWQYLLCSWKPGIGVLLD--TNYNLFYWYEGLDHALQCV 185
Query: 429 VAICAPS-----QINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEI 483
I A + + + + V +E S+ + Q+++ + P
Sbjct: 186 DYIKADGQNIGCRFPYLEASDYKDFYICVNGSSENKPI--RSSYFTFQLQNIVKPLPPVY 243
Query: 484 I 484
+
Sbjct: 244 L 244
Score = 59.4 bits (143), Expect = 7e-09
Identities = 37/241 (15%), Positives = 68/241 (28%), Gaps = 18/241 (7%)
Query: 1861 YTVNLSNSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLK--VTH 1918
YT +S + G T + + PP V L W PP K
Sbjct: 12 YTFLISTTFGC---TSSSDTEIKVNPPQDFEIVDPGYLGYLYLQWQPPLSLDHFKECTVE 68
Query: 1919 YVVERRDISMPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKA 1978
Y ++ R+I W I T + L +G E H + + G ++
Sbjct: 69 YELKYRNIGSETWKTIITK-NLHYKDGFDLNKGIEAXIHTLLPWQCTNGSEVQSSWAETT 127
Query: 1979 KSPYDKPSPPGIPVVTQ---VGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVN 2035
+ P ++ SW + Y + G D +
Sbjct: 128 YWISPQGIPETXVQDMDCVYYNWQYLLCSWKPGIGVLLD--TNYNLFYWYEGLDHALQCV 185
Query: 2036 VAICAPS-----QINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEI 2090
I A + + + + V +E S+ + Q+++ + P
Sbjct: 186 DYIKADGQNIGCRFPYLEASDYKDFYICVNGSSENKPI--RSSYFTFQLQNIVKPLPPVY 243
Query: 2091 I 2091
+
Sbjct: 244 L 244
Score = 57.1 bits (137), Expect = 3e-08
Identities = 52/361 (14%), Positives = 91/361 (25%), Gaps = 74/361 (20%)
Query: 965 LAIGSTYEFRVMAENQYGLSKPALTIDPIKAKHPFDVPGAPGAPKGVDSTE----DSISL 1020
LA+G Y F + S + IK P+ + + + L
Sbjct: 6 LAVGCLYTFLISTTFGCTSS----SDTEIK----------VNPPQDFEIVDPGYLGYLYL 51
Query: 1021 VWSKPRHD--GGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEGKSIGSERG 1078
W P Y ++ R I + W K+I ++
Sbjct: 52 QWQPPLSLDHFKECTVEYELKYRNIGSETW----------------------KTIITKNL 89
Query: 1079 STAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAA--GQGPWSSSSDIIMCCAPPCAPK 1136
L + E G SS ++ +P P+
Sbjct: 90 HYK------------DGFDLNKGIEAXIHTLLPWQCTNGSEVQSSWAETTYWISPQGIPE 137
Query: 1137 ITSDLSIRDMTVLAGEEFTITVPFS-GRPKPTPI------WTVNGDEVSPDGRIKFETSE 1189
++DM + + + G W D +
Sbjct: 138 TX----VQDMDCVYYNWQYLLCSWKPGIGVLLDTNYNLFYWYEGLDHALQCVDYIKADGQ 193
Query: 1190 NQTIYRNKSAKRATDSGSYTIQLVNTVG---SDSASCKVYVVDKPSPPQGPLDVSDITPE 1246
N + + S + ++ + KP PP L + +
Sbjct: 194 NIGCRFPYLEASDYKDFYICVNGSSENKPIRSSYFTFQLQNIVKPLPPVY-LTFTRESSC 252
Query: 1247 SCSLSWKPPLDDGGSPITNYVVEKYESATGFWSKLSSFVRSPAYDVFGLETNRQYRFRVR 1306
L W PL + +Y +E E T + V + Y + RQ F VR
Sbjct: 253 EIKLKWSIPLGPIPARCFDYEIEIREDDTTLVTAT---VENETYTLKTTNETRQLCFVVR 309
Query: 1307 A 1307
+
Sbjct: 310 S 310
Score = 56.3 bits (135), Expect = 6e-08
Identities = 20/109 (18%), Positives = 35/109 (32%), Gaps = 6/109 (5%)
Query: 648 RVVAENDLGM---DSAIVKIQISDRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNY 704
V ++ ++Q +P PP + T + L W P+ + +Y
Sbjct: 213 CVNGSSENKPIRSSYFTFQLQNIVKPLPPVYLTFTRESSCEIKLKWSIPLGPIPARCFDY 272
Query: 705 IVEKREHPMSSWIRVGNTRFTTMAITGLSPGHQYEFRV-YAENVYGRSD 752
+E RE + T + + Q F V N+Y D
Sbjct: 273 EIEIREDDTTLVTATVEN--ETYTLKTTNETRQLCFVVRSKVNIYCSDD 319
Score = 56.0 bits (134), Expect = 8e-08
Identities = 24/243 (9%), Positives = 53/243 (21%), Gaps = 36/243 (14%)
Query: 901 RPHPPENLHADEF-AGDSLTLYWTPPR--DNGGSEITNYVVEKKDYNSTVWTKVSSYVTT 957
+ +PP++ + L L W PP D+ Y ++ ++ S W + +
Sbjct: 31 KVNPPQDFEIVDPGYLGYLYLQWQPPLSLDHFKECTVEYELKYRNIGSETWKTIIT-KNL 89
Query: 958 PFVRVRNLAIGSTYEFRVMAENQYGLSKPALTIDPIKAKHPFDVPGAPGAPKGVD---ST 1014
+ +L G + Q + + +D
Sbjct: 90 HYKDGFDLNKGIEAXIHTLLPWQCTNGSEVQSSWAETTYWISPQGIPETXVQDMDCVYYN 149
Query: 1015 EDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEGKSIG 1074
+ W P Y + D ++ +I
Sbjct: 150 WQYLLCSWK-PGIGVLLDTN-YNLFYWYEGLDHALQCVD-YIKADGQNIGCRFP------ 200
Query: 1075 SERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPWSSSSDIIMCCAPPCA 1134
+ ++ V + S + + P
Sbjct: 201 --------------------YLEASDYKDFYICVNGSSENKPIRSSYFTFQLQNIVKPLP 240
Query: 1135 PKI 1137
P
Sbjct: 241 PVY 243
Score = 51.7 bits (123), Expect = 2e-06
Identities = 14/86 (16%), Positives = 30/86 (34%), Gaps = 3/86 (3%)
Query: 890 DEMVLIFEVLDRPHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWT 949
+ + +P PP L + + L W+ P + +Y +E ++ ++T+ T
Sbjct: 226 SYFTFQLQNIVKPLPPVYLTFTRESSCEIKLKWSIPLGPIPARCFDYEIEIREDDTTLVT 285
Query: 950 KVSSYVTTPFVRVRNLAIGSTYEFRV 975
T ++ F V
Sbjct: 286 ATVENETY---TLKTTNETRQLCFVV 308
Score = 46.7 bits (110), Expect = 7e-05
Identities = 22/182 (12%), Positives = 50/182 (27%), Gaps = 17/182 (9%)
Query: 1218 SDSASCKVYVVDKPSPPQGPLDVSDITPESCSL--SWKPPLDDGGSPITNYVVEKYESAT 1275
S A ++ + P D+ + L SWKP + TNY + +
Sbjct: 121 SSWAETTYWISPQGIPETXVQDMDCVYYNWQYLLCSWKPGIG--VLLDTNYNLFYWYEGL 178
Query: 1276 GFWSKLSSFVRSPAY------DVFGLETNRQYRFRVRAENQYGVSEPLELDNSITAKFPF 1329
+ ++++ + + V ++ +
Sbjct: 179 DHALQCVDYIKADGQNIGCRFPYLEASDYKDFYICVNGSSENKPIRSSYFTFQLQNIVK- 237
Query: 1330 TVPDPPGQPQIVDWDTNNATLMWDRPRTDGGSKIQGYKMLLKTPTGELPTTIWSKIRPTS 1389
P PP + L W P ++ Y++ ++ TT+ +
Sbjct: 238 --PLPPVYLTFTRESSCEIKLKWSIPLGPIPARCFDYEIEIREDD----TTLVTATVENE 291
Query: 1390 ST 1391
+
Sbjct: 292 TY 293
Score = 45.2 bits (106), Expect = 2e-04
Identities = 21/100 (21%), Positives = 40/100 (40%), Gaps = 7/100 (7%)
Query: 255 TVNLSNSSGSV-SGTFTINITGL--PGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTH 311
VN S+ + + S FT + + P PP+ L + + L W+ P +
Sbjct: 213 CVNGSSENKPIRSSYFTFQLQNIVKPLPPVY-LTFTRESSCEIKLKWSIPLGPIPARCFD 271
Query: 312 YVVERRDISMPHWICISTTCHDTTFIVQGLTEGQEYLFHV 351
Y +E R+ + T + T+ ++ E ++ F V
Sbjct: 272 YEIEIREDDTTLV---TATVENETYTLKTTNETRQLCFVV 308
Score = 45.2 bits (106), Expect = 2e-04
Identities = 21/100 (21%), Positives = 40/100 (40%), Gaps = 7/100 (7%)
Query: 1862 TVNLSNSSGSV-SGTFTINITGL--PGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTH 1918
VN S+ + + S FT + + P PP+ L + + L W+ P +
Sbjct: 213 CVNGSSENKPIRSSYFTFQLQNIVKPLPPVY-LTFTRESSCEIKLKWSIPLGPIPARCFD 271
Query: 1919 YVVERRDISMPHWICISTTCHDTTFIVQGLTEGQEYLFHV 1958
Y +E R+ + T + T+ ++ E ++ F V
Sbjct: 272 YEIEIREDDTTLV---TATVENETYTLKTTNETRQLCFVV 308
Score = 44.8 bits (105), Expect = 3e-04
Identities = 20/114 (17%), Positives = 34/114 (29%), Gaps = 6/114 (5%)
Query: 647 YRVVAENDLGMDSAIVKIQISDRPDPPQFPTVEDIGHDS-LALVWRAP-IWDGGSNIT-N 703
Y + G S+ + +PPQ + D G+ L L W+ P D T
Sbjct: 12 YTFLISTTFGCTSSSDTEI---KVNPPQDFEIVDPGYLGYLYLQWQPPLSLDHFKECTVE 68
Query: 704 YIVEKREHPMSSWIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTS 757
Y ++ R +W + L+ G + +S
Sbjct: 69 YELKYRNIGSETWKTIITKNLHYKDGFDLNKGIEAXIHTLLPWQCTNGSEVQSS 122
Score = 33.2 bits (75), Expect = 0.92
Identities = 13/75 (17%), Positives = 22/75 (29%), Gaps = 7/75 (9%)
Query: 22 YIIERREVGGAIWLKCNDYNV-----LECSFSVLNLVEGNDYEFRIIAVNAIGKSEPSIC 76
Y + G L+C DY + C F L + D+ + + S
Sbjct: 169 YNLFYWYEGLDHALQCVDYIKADGQNIGCRFPYLEASDYKDFYICVNGSSENKPIRSS-- 226
Query: 77 TTPVKICEFVGGEKP 91
++ V P
Sbjct: 227 YFTFQLQNIVKPLPP 241
Score = 31.7 bits (71), Expect = 3.1
Identities = 12/77 (15%), Positives = 21/77 (27%), Gaps = 7/77 (9%)
Query: 1627 STAQFLEREVGGAIWLKCNDYNV-----LECSFSVLNLVEGNDYEFRIIAVNAIGKSEPS 1681
+ G L+C DY + C F L + D+ + + S
Sbjct: 167 TNYNLFYWYEGLDHALQCVDYIKADGQNIGCRFPYLEASDYKDFYICVNGSSENKPIRSS 226
Query: 1682 ICTTPVKICEFVGGEKP 1698
++ V P
Sbjct: 227 --YFTFQLQNIVKPLPP 241
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat
protein, ADA protein, ATP-binding, cell cycle, kinase,
nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo
sapiens} PDB: 2wtk_B*
Length = 389
Score = 71.9 bits (176), Expect = 8e-13
Identities = 16/82 (19%), Positives = 35/82 (42%), Gaps = 4/82 (4%)
Query: 820 DHYDILEEIGTGA--FGVVHRCRERKTGNIFAAKFIPVSHNLEKEL--IRKEIDIMNQLH 875
Y++L IG G V+ R + TG + I + + + ++ E+ + +
Sbjct: 25 GCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFN 84
Query: 876 HPKLINLHDAFEDDDEMVLIFE 897
HP ++ F D+E+ ++
Sbjct: 85 HPNIVPYRATFIADNELWVVTS 106
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP
complex, transferase; HET: ANP; 2.30A {Homo sapiens}
PDB: 3alo_A*
Length = 327
Score = 70.8 bits (174), Expect = 9e-13
Identities = 19/83 (22%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Query: 820 DHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNL-EKELIRKEIDI-MNQLHHP 877
+ L EIG GA+G V++ + +G I A K I + + E++ + ++D+ M P
Sbjct: 22 EDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCP 81
Query: 878 KLINLHDAFEDDDEMVLIFEVLD 900
++ + A + + + E++
Sbjct: 82 YIVQFYGALFREGDCWICMELMS 104
>3k2m_C Monobody HA4; engineered binding protein, antibody mimic,
protein-protein SH2 domain, ATP-binding, phosphoprotein;
1.75A {Homo sapiens} PDB: 3uyo_D 1ttf_A 1ttg_A 3rzw_A
1fna_A
Length = 101
Score = 65.2 bits (159), Expect = 1e-12
Identities = 25/99 (25%), Positives = 34/99 (34%), Gaps = 6/99 (6%)
Query: 670 PDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSW---IRVGNTRFTT 726
P V SL + W AP S++ Y + E +S V + +T
Sbjct: 5 SSVPTKLEVVAATPTSLLISWDAP--MSSSSVYYYRITYGETGGNSPVQEFTVPYSS-ST 61
Query: 727 MAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKDT 765
I+GLSPG Y VYA S + T
Sbjct: 62 ATISGLSPGVDYTITVYAWGEDSAGYMFMYSPISINYRT 100
Score = 63.3 bits (154), Expect = 5e-12
Identities = 20/90 (22%), Positives = 28/90 (31%), Gaps = 6/90 (6%)
Query: 1231 PSPPQGPLDVSDITPESCSLSWKPPLDDGGSPITNYVVEKYESATGFWSKLSSFVRSPA- 1289
S P L+V TP S +SW P+ S + Y + Y G V +
Sbjct: 5 SSVPTK-LEVVAATPTSLLISWDAPMS--SSSVYYYRIT-YGETGGNSPVQEFTVPYSSS 60
Query: 1290 -YDVFGLETNRQYRFRVRAENQYGVSEPLE 1318
+ GL Y V A +
Sbjct: 61 TATISGLSPGVDYTITVYAWGEDSAGYMFM 90
Score = 60.9 bits (148), Expect = 3e-11
Identities = 21/90 (23%), Positives = 29/90 (32%), Gaps = 2/90 (2%)
Query: 378 PSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQI 437
S P V + +SWD P+ + Y I E G ++ + + S
Sbjct: 5 SSVPTKLEVVAATPTSLLISWDAPMSSSS--VYYYRITYGETGGNSPVQEFTVPYSSSTA 62
Query: 438 NIPNLIEGRQYEFRVYAQNEAGLSLPSSAS 467
I L G Y VYA E S
Sbjct: 63 TISGLSPGVDYTITVYAWGEDSAGYMFMYS 92
Score = 60.9 bits (148), Expect = 3e-11
Identities = 21/90 (23%), Positives = 29/90 (32%), Gaps = 2/90 (2%)
Query: 1985 PSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQI 2044
S P V + +SWD P+ + Y I E G ++ + + S
Sbjct: 5 SSVPTKLEVVAATPTSLLISWDAPMSSSS--VYYYRITYGETGGNSPVQEFTVPYSSSTA 62
Query: 2045 NIPNLIEGRQYEFRVYAQNEAGLSLPSSAS 2074
I L G Y VYA E S
Sbjct: 63 TISGLSPGVDYTITVYAWGEDSAGYMFMYS 92
Score = 59.4 bits (144), Expect = 1e-10
Identities = 16/99 (16%), Positives = 28/99 (28%), Gaps = 8/99 (8%)
Query: 902 PHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTK---VSSYVTTP 958
P L SL + W P + + Y + + + V +T
Sbjct: 5 SSVPTKLEVVAATPTSLLISWDAPMSSSS--VYYYRITYGETGGNSPVQEFTVPYSSST- 61
Query: 959 FVRVRNLAIGSTYEFRVMAENQYGLSKPALTIDPIKAKH 997
+ L+ G Y V A + + PI +
Sbjct: 62 -ATISGLSPGVDYTITVYAWGEDSAGYMFMY-SPISINY 98
Score = 59.0 bits (143), Expect = 1e-10
Identities = 17/92 (18%), Positives = 33/92 (35%), Gaps = 4/92 (4%)
Query: 274 TGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWI-CISTTCH 332
+ + P L+V T + + W+ P V +Y + + + +
Sbjct: 2 SSVSSVPTK-LEVVAATPTSLLISWDAPMSSSS--VYYYRITYGETGGNSPVQEFTVPYS 58
Query: 333 DTTFIVQGLTEGQEYLFHVMAVNENGMGPPLE 364
+T + GL+ G +Y V A E+ G
Sbjct: 59 SSTATISGLSPGVDYTITVYAWGEDSAGYMFM 90
Score = 59.0 bits (143), Expect = 1e-10
Identities = 17/92 (18%), Positives = 33/92 (35%), Gaps = 4/92 (4%)
Query: 1881 TGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWI-CISTTCH 1939
+ + P L+V T + + W+ P V +Y + + + +
Sbjct: 2 SSVSSVPTK-LEVVAATPTSLLISWDAPMSSSS--VYYYRITYGETGGNSPVQEFTVPYS 58
Query: 1940 DTTFIVQGLTEGQEYLFHVMAVNENGMGPPLE 1971
+T + GL+ G +Y V A E+ G
Sbjct: 59 SSTATISGLSPGVDYTITVYAWGEDSAGYMFM 90
Score = 50.9 bits (122), Expect = 1e-07
Identities = 18/125 (14%), Positives = 32/125 (25%), Gaps = 34/125 (27%)
Query: 1001 VPGAPGAPKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTS 1060
V P + V +T S+ + W P S + Y + + ++ +P +S
Sbjct: 4 VSSVPTKLEVVAATPTSLLISWDAP--MSSSSVYYYRITYGETGGNSPVQEFT--VPYSS 59
Query: 1061 LKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPWS 1120
+ + L +Y V A G
Sbjct: 60 STATI------------------------------SGLSPGVDYTITVYAWGEDSAGYMF 89
Query: 1121 SSSDI 1125
S I
Sbjct: 90 MYSPI 94
Score = 36.3 bits (84), Expect = 0.016
Identities = 12/61 (19%), Positives = 21/61 (34%), Gaps = 1/61 (1%)
Query: 22 YIIERREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPSICTTPVK 81
Y I E GG ++ + ++ L G DY + A + +P+
Sbjct: 37 YRITYGETGGNSPVQEFTVPYSSSTATISGLSPGVDYTITVYAWGEDSAGYMFM-YSPIS 95
Query: 82 I 82
I
Sbjct: 96 I 96
Score = 34.4 bits (79), Expect = 0.074
Identities = 10/63 (15%), Positives = 24/63 (38%), Gaps = 2/63 (3%)
Query: 1330 TVPDPPGQPQIVDWDTNNATLMWDRPRTDGGSKIQGYKMLLKTPTGELPTTIWSKIRPTS 1389
+V P + ++V + + WD P + + Y++ G P ++ +S
Sbjct: 3 SVSSVPTKLEVVAATPTSLLISWDAPMSSSS--VYYYRITYGETGGNSPVQEFTVPYSSS 60
Query: 1390 STV 1392
+
Sbjct: 61 TAT 63
Score = 32.4 bits (74), Expect = 0.29
Identities = 16/131 (12%), Positives = 32/131 (24%), Gaps = 48/131 (36%)
Query: 1559 VDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEG 1618
V +T S+ + W P S + Y + + ++
Sbjct: 14 VAATPTSLLISWDAP--MSSSSVYYYRITYGETGGNSPVQ-------------------- 51
Query: 1619 KSIGSERGSTAQFLEREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKS 1678
E V + + ++ L G DY + A
Sbjct: 52 --------------EFTVPYS-----------SSTATISGLSPGVDYTITVYAWGEDSAG 86
Query: 1679 EPSICTTPVKI 1689
+ +P+ I
Sbjct: 87 YMFM-YSPISI 96
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase,
PASK, protein kinase, drug discovery, ATP-bindin kinase,
nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Length = 335
Score = 70.1 bits (172), Expect = 1e-12
Identities = 24/103 (23%), Positives = 45/103 (43%), Gaps = 13/103 (12%)
Query: 808 PQPVDIKTSSVYD-----HYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKE 862
P+ V+++ + + Y + +G+GAFG V +++ KFI LE
Sbjct: 7 PKAVELEGLAACEGEYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDC 66
Query: 863 L--------IRKEIDIMNQLHHPKLINLHDAFEDDDEMVLIFE 897
+ EI I++++ H +I + D FE+ L+ E
Sbjct: 67 WIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQGFFQLVME 109
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7,
activated mutant, ATP-binding, structural genomics,
NPPSFA; 2.45A {Homo sapiens}
Length = 318
Score = 69.7 bits (171), Expect = 2e-12
Identities = 21/83 (25%), Positives = 43/83 (51%), Gaps = 2/83 (2%)
Query: 820 DHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEK-ELIRKEIDI-MNQLHHP 877
+ + L E+G+G G V + R RKTG++ A K + S N E+ + I ++D+ + P
Sbjct: 25 NDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCP 84
Query: 878 KLINLHDAFEDDDEMVLIFEVLD 900
++ F + ++ + E++
Sbjct: 85 YIVQCFGTFITNTDVFIAMELMG 107
>2djs_A Ephrin type-B receptor 1; tyrosine-protein kinase receptor EPH-2,
NET, HEK6, ELK, structural genomics, NPPSFA; NMR {Homo
sapiens} SCOP: b.1.2.1
Length = 108
Score = 64.4 bits (157), Expect = 2e-12
Identities = 24/99 (24%), Positives = 33/99 (33%), Gaps = 2/99 (2%)
Query: 667 SDRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSWI-RVGNTRFT 725
S P S+ L W P G I +Y + E + + + ++
Sbjct: 5 SSGPSTVPIMHQVSATMRSITLSWPQPEQPNG-IILDYEIRYYEKEHNEFNSSMARSQTN 63
Query: 726 TMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKD 764
T I GL PG Y +V A V G S T D
Sbjct: 64 TARIDGLRPGMVYVVQVRARTVAGYGKFSGKMCFQTLTD 102
Score = 62.9 bits (153), Expect = 9e-12
Identities = 21/93 (22%), Positives = 33/93 (35%), Gaps = 5/93 (5%)
Query: 1229 DKPSPPQGPLDVSDITPESCSLSWKPPLDDGGSPITNYVVEKYESATGFWSKLSSFVRSP 1288
PS + T S +LSW P G I +Y + YE ++ + ++
Sbjct: 6 SGPSTVPI-MHQVSATMRSITLSWPQPEQPNG-IILDYEIRYYEKEHNEFNSSMARSQTN 63
Query: 1289 AYDVFGLETNRQYRFRVRAENQYGV---SEPLE 1318
+ GL Y +VRA G S +
Sbjct: 64 TARIDGLRPGMVYVVQVRARTVAGYGKFSGKMC 96
Score = 60.9 bits (148), Expect = 4e-11
Identities = 19/123 (15%), Positives = 32/123 (26%), Gaps = 34/123 (27%)
Query: 1000 DVPGAPGAPKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDT 1059
P V +T SI+L W +P G I Y + +++
Sbjct: 6 SGPSTVPIMHQVSATMRSITLSWPQPEQPNG-IILDYEIRYYEKEHNEF----------- 53
Query: 1060 SLKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPW 1119
+ + + + L Y +V A AG G +
Sbjct: 54 --------NSSMARSQTNTAR--------------IDGLRPGMVYVVQVRARTVAGYGKF 91
Query: 1120 SSS 1122
S
Sbjct: 92 SGK 94
Score = 59.8 bits (145), Expect = 9e-11
Identities = 19/106 (17%), Positives = 32/106 (30%), Gaps = 5/106 (4%)
Query: 277 PGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHDTTF 336
P + T + TL W P+ G+ + Y + + + T
Sbjct: 8 PSTV-PIMHQVSATMRSITLSWPQPEQPNGI-ILDYEIRYYEKEHNEFNSSMARSQTNTA 65
Query: 337 IVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPG 382
+ GL G Y+ V A G G + ++ D G
Sbjct: 66 RIDGLRPGMVYVVQVRARTVAGYGKF---SGKMCFQTLTDSGPSSG 108
Score = 59.8 bits (145), Expect = 9e-11
Identities = 19/106 (17%), Positives = 32/106 (30%), Gaps = 5/106 (4%)
Query: 1884 PGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHDTTF 1943
P + T + TL W P+ G+ + Y + + + T
Sbjct: 8 PSTV-PIMHQVSATMRSITLSWPQPEQPNGI-ILDYEIRYYEKEHNEFNSSMARSQTNTA 65
Query: 1944 IVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPG 1989
+ GL G Y+ V A G G + ++ D G
Sbjct: 66 RIDGLRPGMVYVVQVRARTVAGYGKF---SGKMCFQTLTDSGPSSG 108
Score = 59.4 bits (144), Expect = 2e-10
Identities = 22/103 (21%), Positives = 32/103 (31%), Gaps = 5/103 (4%)
Query: 371 AKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVA 430
S PS I + LSW +P G I Y I +E + +
Sbjct: 1 GSSGSSGPSTVPIMHQVSATMRSITLSWPQPEQPNG-IILDYEIRYYEKEHNEFNSSMA- 58
Query: 431 ICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIK 473
+ I L G Y +V A+ AG S + +
Sbjct: 59 RSQTNTARIDGLRPGMVYVVQVRARTVAG---YGKFSGKMCFQ 98
Score = 59.4 bits (144), Expect = 2e-10
Identities = 22/103 (21%), Positives = 32/103 (31%), Gaps = 5/103 (4%)
Query: 1978 AKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVA 2037
S PS I + LSW +P G I Y I +E + +
Sbjct: 1 GSSGSSGPSTVPIMHQVSATMRSITLSWPQPEQPNG-IILDYEIRYYEKEHNEFNSSMA- 58
Query: 2038 ICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIK 2080
+ I L G Y +V A+ AG S + +
Sbjct: 59 RSQTNTARIDGLRPGMVYVVQVRARTVAG---YGKFSGKMCFQ 98
Score = 58.6 bits (142), Expect = 2e-10
Identities = 18/83 (21%), Positives = 27/83 (32%), Gaps = 1/83 (1%)
Query: 900 DRPHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTKVSSYVTTPF 959
P +H S+TL W P G I +Y + + + + T
Sbjct: 6 SGPSTVPIMHQVSATMRSITLSWPQPEQPNG-IILDYEIRYYEKEHNEFNSSMARSQTNT 64
Query: 960 VRVRNLAIGSTYEFRVMAENQYG 982
R+ L G Y +V A G
Sbjct: 65 ARIDGLRPGMVYVVQVRARTVAG 87
Score = 34.7 bits (80), Expect = 0.057
Identities = 17/131 (12%), Positives = 31/131 (23%), Gaps = 50/131 (38%)
Query: 1559 VDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEG 1618
V +T SI+L W +P G I Y + +++ + + +
Sbjct: 17 VSATMRSITLSWPQPEQPNG-IILDYEIRYYEKEHNEFN----SSMARSQ---------- 61
Query: 1619 KSIGSERGSTAQFLEREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIG-- 1676
+ + L G Y ++ A G
Sbjct: 62 --------------------------------TNTARIDGLRPGMVYVVQVRARTVAGYG 89
Query: 1677 -KSEPSICTTP 1686
S T
Sbjct: 90 KFSGKMCFQTL 100
Score = 34.0 bits (78), Expect = 0.12
Identities = 9/63 (14%), Positives = 21/63 (33%), Gaps = 1/63 (1%)
Query: 1330 TVPDPPGQPQIVDWDTNNATLMWDRPRTDGGSKIQGYKMLLKTPTGELPTTIWSKIRPTS 1389
+ P V + TL W +P G I Y++ + ++ + +
Sbjct: 6 SGPSTVPIMHQVSATMRSITLSWPQPEQPNG-IILDYEIRYYEKEHNEFNSSMARSQTNT 64
Query: 1390 STV 1392
+ +
Sbjct: 65 ARI 67
Score = 29.0 bits (65), Expect = 6.5
Identities = 10/61 (16%), Positives = 16/61 (26%), Gaps = 4/61 (6%)
Query: 22 YIIERREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIG---KSEPSICTT 78
Y I E + + + + L G Y ++ A G S T
Sbjct: 41 YEIRYYEKEHNEFNSSMARSQ-TNTARIDGLRPGMVYVVQVRARTVAGYGKFSGKMCFQT 99
Query: 79 P 79
Sbjct: 100 L 100
>1x5l_A Ephrin type-A receptor 8; FN3 domain, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Length = 111
Score = 64.7 bits (158), Expect = 2e-12
Identities = 27/100 (27%), Positives = 39/100 (39%), Gaps = 6/100 (6%)
Query: 668 DRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIV---EKREHPMSSWIRVGNTRF 724
P E G S++L+W+ P G I Y + EK + S T
Sbjct: 9 AAPSQVVVIRQERAGQTSVSLLWQEPEQPNG-IILEYEIKYYEKDKEMQSYSTLKAVTTR 67
Query: 725 TTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKD 764
T ++GL PG +Y F+V A G S ++ T K
Sbjct: 68 AT--VSGLKPGTRYVFQVRARTSAGCGRFSQAMEVETGKP 105
Score = 64.3 bits (157), Expect = 3e-12
Identities = 25/107 (23%), Positives = 35/107 (32%), Gaps = 7/107 (6%)
Query: 1229 DKPSPPQGPLDVSDITPESCSLSWKPPLDDGGSPITNYVVEKYESATGFWSKLSSFVRSP 1288
PS + S SL W+ P G I Y ++ YE S + +
Sbjct: 9 AAPSQVVV-IRQERAGQTSVSLLWQEPEQPNG-IILEYEIKYYEKDKEMQSYSTLKAVTT 66
Query: 1289 AYDVFGLETNRQYRFRVRAENQYGVSEPLELDNSITAKFPFTVPDPP 1335
V GL+ +Y F+VRA G S + P P
Sbjct: 67 RATVSGLKPGTRYVFQVRARTSAGCGRF-----SQAMEVETGKPSGP 108
Score = 62.0 bits (151), Expect = 2e-11
Identities = 22/103 (21%), Positives = 38/103 (36%), Gaps = 5/103 (4%)
Query: 371 AKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVA 430
S PS + + G V+L W +P G I Y I +E + +
Sbjct: 4 GSSGQAAPSQVVVIRQERAGQTSVSLLWQEPEQPNG-IILEYEIKYYEKDKEMQSYSTLK 62
Query: 431 ICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIK 473
+ L G +Y F+V A+ AG S +++++
Sbjct: 63 AVTTR-ATVSGLKPGTRYVFQVRARTSAG---CGRFSQAMEVE 101
Score = 62.0 bits (151), Expect = 2e-11
Identities = 22/103 (21%), Positives = 38/103 (36%), Gaps = 5/103 (4%)
Query: 1978 AKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVA 2037
S PS + + G V+L W +P G I Y I +E + +
Sbjct: 4 GSSGQAAPSQVVVIRQERAGQTSVSLLWQEPEQPNG-IILEYEIKYYEKDKEMQSYSTLK 62
Query: 2038 ICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIK 2080
+ L G +Y F+V A+ AG S +++++
Sbjct: 63 AVTTR-ATVSGLKPGTRYVFQVRARTSAG---CGRFSQAMEVE 101
Score = 62.0 bits (151), Expect = 2e-11
Identities = 21/112 (18%), Positives = 41/112 (36%), Gaps = 8/112 (7%)
Query: 272 NITGLPGPPIGPLDVS--EITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICIST 329
+ + P + + + + +L W P+ G+ + Y ++ + +
Sbjct: 3 SGSSGQAAPSQVVVIRQERAGQTSVSLLWQEPEQPNGI-ILEYEIKYYEKDKEMQSYSTL 61
Query: 330 TCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPP 381
T V GL G Y+F V A G G + ++ ++ KPS P
Sbjct: 62 KAVTTRATVSGLKPGTRYVFQVRARTSAGCGRFSQ---AMEVETG--KPSGP 108
Score = 62.0 bits (151), Expect = 2e-11
Identities = 21/112 (18%), Positives = 41/112 (36%), Gaps = 8/112 (7%)
Query: 1879 NITGLPGPPIGPLDVS--EITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICIST 1936
+ + P + + + + +L W P+ G+ + Y ++ + +
Sbjct: 3 SGSSGQAAPSQVVVIRQERAGQTSVSLLWQEPEQPNGI-ILEYEIKYYEKDKEMQSYSTL 61
Query: 1937 TCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPP 1988
T V GL G Y+F V A G G + ++ ++ KPS P
Sbjct: 62 KAVTTRATVSGLKPGTRYVFQVRARTSAGCGRFSQ---AMEVETG--KPSGP 108
Score = 60.1 bits (146), Expect = 8e-11
Identities = 20/126 (15%), Positives = 40/126 (31%), Gaps = 34/126 (26%)
Query: 1000 DVPGAPGAPKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDT 1059
P + + + S+SL+W +P G I Y ++ + S + +
Sbjct: 9 AAPSQVVVIRQERAGQTSVSLLWQEPEQPNG-IILEYEIKYYEKDKEMQ---SYSTLKAV 64
Query: 1060 SLKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPW 1119
+ + V+ L Y F+V A +AG G +
Sbjct: 65 TTRAT------------------------------VSGLKPGTRYVFQVRARTSAGCGRF 94
Query: 1120 SSSSDI 1125
S + ++
Sbjct: 95 SQAMEV 100
Score = 58.5 bits (142), Expect = 3e-10
Identities = 19/108 (17%), Positives = 38/108 (35%), Gaps = 6/108 (5%)
Query: 900 DRPHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTKVSSYVTTPF 959
P + + S++L W P G I Y ++ + + + + + T
Sbjct: 9 AAPSQVVVIRQERAGQTSVSLLWQEPEQPNG-IILEYEIKYYEKDKEMQSYSTLKAVTTR 67
Query: 960 VRVRNLAIGSTYEFRVMAENQYGLSKPALTIDPIKAKHPFDVPGAPGA 1007
V L G+ Y F+V A G + + ++ + P P +
Sbjct: 68 ATVSGLKPGTRYVFQVRARTSAGCGRFS---QAMEVE--TGKPSGPSS 110
Score = 33.9 bits (78), Expect = 0.12
Identities = 12/63 (19%), Positives = 21/63 (33%), Gaps = 1/63 (1%)
Query: 1330 TVPDPPGQPQIVDWDTNNATLMWDRPRTDGGSKIQGYKMLLKTPTGELPTTIWSKIRPTS 1389
P + + +L+W P G I Y++ E+ + K T
Sbjct: 9 AAPSQVVVIRQERAGQTSVSLLWQEPEQPNG-IILEYEIKYYEKDKEMQSYSTLKAVTTR 67
Query: 1390 STV 1392
+TV
Sbjct: 68 ATV 70
Score = 32.7 bits (75), Expect = 0.33
Identities = 17/132 (12%), Positives = 32/132 (24%), Gaps = 50/132 (37%)
Query: 1559 VDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEG 1618
+ + S+SL+W +P G I Y ++ +
Sbjct: 20 ERAGQTSVSLLWQEPEQPNG-IILEYEIKYYEKDKEMQSY-------------------- 58
Query: 1619 KSIGSERGSTAQFLEREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIG-- 1676
+ + +V L G Y F++ A + G
Sbjct: 59 --------------------------STLKAVTTRATVSGLKPGTRYVFQVRARTSAGCG 92
Query: 1677 -KSEPSICTTPV 1687
S+ T
Sbjct: 93 RFSQAMEVETGK 104
Score = 31.9 bits (73), Expect = 0.52
Identities = 12/62 (19%), Positives = 21/62 (33%), Gaps = 4/62 (6%)
Query: 22 YIIERREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIG---KSEPSICTT 78
Y I+ E + + + +V L G Y F++ A + G S+ T
Sbjct: 44 YEIKYYEKDKEMQSY-STLKAVTTRATVSGLKPGTRYVFQVRARTSAGCGRFSQAMEVET 102
Query: 79 PV 80
Sbjct: 103 GK 104
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase,
serine/threonine-protein kinase, ATP-binding,
phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP:
d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Length = 288
Score = 68.7 bits (169), Expect = 3e-12
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 9/86 (10%)
Query: 820 DHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKE-----LIRKEIDIMNQL 874
+ Y LE+IG G +GVV++ + G FA K I + E E IR EI I+ +L
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEK--EDEGIPSTTIR-EISILKEL 57
Query: 875 HHPKLINLHDAFEDDDEMVLIFEVLD 900
H ++ L+D +VL+FE LD
Sbjct: 58 KHSNIVKLYDVIHTKKRLVLVFEHLD 83
>3niz_A Rhodanese family protein; structural genomics, structural genomics
consortium, SGC, phosphotransferase, cyclin dependent
kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB:
2qkr_A*
Length = 311
Score = 68.4 bits (168), Expect = 4e-12
Identities = 28/86 (32%), Positives = 48/86 (55%), Gaps = 9/86 (10%)
Query: 820 DHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKE-----LIRKEIDIMNQL 874
+ Y LE++G G +GVV++ ++ G I A K I + E E IR EI ++ +L
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAKD-SQGRIVALKRIRLDA--EDEGIPSTAIR-EISLLKEL 76
Query: 875 HHPKLINLHDAFEDDDEMVLIFEVLD 900
HHP +++L D + + L+FE ++
Sbjct: 77 HHPNIVSLIDVIHSERCLTLVFEFME 102
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed
death-1 ligand 1, complex, costimulatory, immune system;
2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Length = 222
Score = 66.9 bits (163), Expect = 4e-12
Identities = 32/229 (13%), Positives = 61/229 (26%), Gaps = 48/229 (20%)
Query: 482 EIIVPLRNANAIQNHNAQFQCTITGCPKP-----TISWLKGSREI--------------- 521
+ VP N +C + + W + I
Sbjct: 3 TVTVPKDLYVVEYGSNMTIECKFPVEKQLDLAALIVYWEMEDKNIIQFVHGEEDLKVQHS 62
Query: 522 TPSARHHIFAEGDTY---TLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNV 578
+ R + + + L I V DA Y C ++ GG + + +
Sbjct: 63 SYRQRARLLKDQLSLGNAALQITDVKLQDAGVYRCM-ISYGGADYKRITVKVNAPYNKIN 121
Query: 579 PPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESG-----------GHFHVET 627
+ GYPK ++ W + + SG F+V +
Sbjct: 122 QRILVVD---PVTSEHELTCQAEGYPKAEVIWTSSDHQVLSGKTTTTNSKREEKLFNVTS 178
Query: 628 SERHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQISDRP--DPPQ 674
+ L I +N + ++ ++ I + P PP
Sbjct: 179 T-----LRINTTTNEI---FYCTFRRLDPEENHTAELVIPELPLAHPPN 219
Score = 60.0 bits (145), Expect = 1e-09
Identities = 16/101 (15%), Positives = 33/101 (32%), Gaps = 3/101 (2%)
Query: 89 EKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYR--VETAGGVF 146
+ I +V P+ L C+A G P + W + ++ SG + +F
Sbjct: 115 APYNKINQRILVVDPVTSEHELTCQAEGYPKAEVIWTSSDHQVLSGKTTTTNSKREEKLF 174
Query: 147 RLHFN-EVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRI 186
+ + N + C + ++ + I P
Sbjct: 175 NVTSTLRINTTTNEIFYCTFRRLDPEENHTAELVIPELPLA 215
Score = 60.0 bits (145), Expect = 1e-09
Identities = 16/101 (15%), Positives = 33/101 (32%), Gaps = 3/101 (2%)
Query: 1696 EKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYR--VETAGGVF 1753
+ I +V P+ L C+A G P + W + ++ SG + +F
Sbjct: 115 APYNKINQRILVVDPVTSEHELTCQAEGYPKAEVIWTSSDHQVLSGKTTTTNSKREEKLF 174
Query: 1754 RLHFN-EVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRI 1793
+ + N + C + ++ + I P
Sbjct: 175 NVTSTLRINTTTNEIFYCTFRRLDPEENHTAELVIPELPLA 215
Score = 54.6 bits (131), Expect = 6e-08
Identities = 35/210 (16%), Positives = 55/210 (26%), Gaps = 27/210 (12%)
Query: 94 IVPLKDLVVPLGKLLTLQCEATGTPVPKC-----RWLRNGREI-------------SSGA 135
VP VV G +T++C+ W + I S
Sbjct: 5 TVPKDLYVVEYGSNMTIECKFPVEKQLDLAALIVYWEMEDKNIIQFVHGEEDLKVQHSSY 64
Query: 136 RYRVE-----TAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMP 190
R R + G L +V D G Y C + G + VK+ P
Sbjct: 65 RQRARLLKDQLSLGNAALQITDVKLQDAGVYRCMI-SYGGADYKRITVKVNAPYNKINQR 123
Query: 191 NALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDD---YIIIFIKEIR 247
+ P ++ G EV T + V S + + + I
Sbjct: 124 ILVVDPVTSEHELTCQAEGYPKAEVIWTSSDHQVLSGKTTTTNSKREEKLFNVTSTLRIN 183
Query: 248 KEDAGDYTVNLSNSSGSVSGTFTINITGLP 277
+ + T + I LP
Sbjct: 184 TTTNEIFYCTFRRLDPEENHTAELVIPELP 213
Score = 54.6 bits (131), Expect = 6e-08
Identities = 35/210 (16%), Positives = 55/210 (26%), Gaps = 27/210 (12%)
Query: 1701 IVPLKDLVVPLGKLLTLQCEATGTPVPKC-----RWLRNGREI-------------SSGA 1742
VP VV G +T++C+ W + I S
Sbjct: 5 TVPKDLYVVEYGSNMTIECKFPVEKQLDLAALIVYWEMEDKNIIQFVHGEEDLKVQHSSY 64
Query: 1743 RYRVE-----TAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMP 1797
R R + G L +V D G Y C + G + VK+ P
Sbjct: 65 RQRARLLKDQLSLGNAALQITDVKLQDAGVYRCMI-SYGGADYKRITVKVNAPYNKINQR 123
Query: 1798 NALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDD---YIIIFIKEIR 1854
+ P ++ G EV T + V S + + + I
Sbjct: 124 ILVVDPVTSEHELTCQAEGYPKAEVIWTSSDHQVLSGKTTTTNSKREEKLFNVTSTLRIN 183
Query: 1855 KEDAGDYTVNLSNSSGSVSGTFTINITGLP 1884
+ + T + I LP
Sbjct: 184 TTTNEIFYCTFRRLDPEENHTAELVIPELP 213
Score = 53.5 bits (128), Expect = 1e-07
Identities = 14/105 (13%), Positives = 29/105 (27%), Gaps = 3/105 (2%)
Query: 479 KAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTL 538
I + C G PK + W ++ ++ +
Sbjct: 115 APYNKINQRILVVDPVTSEHELTCQAEGYPKAEVIWTSSDHQVLSGKTTTTNSKREEKLF 174
Query: 539 IINSVYGV---DADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPP 580
+ S + + + C ++ AEL+I P + P
Sbjct: 175 NVTSTLRINTTTNEIFYCTFRRLDPEENHTAELVIPELPLAHPPN 219
Score = 53.5 bits (128), Expect = 1e-07
Identities = 14/105 (13%), Positives = 29/105 (27%), Gaps = 3/105 (2%)
Query: 2086 KAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTL 2145
I + C G PK + W ++ ++ +
Sbjct: 115 APYNKINQRILVVDPVTSEHELTCQAEGYPKAEVIWTSSDHQVLSGKTTTTNSKREEKLF 174
Query: 2146 IINSVYGV---DADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPP 2187
+ S + + + C ++ AEL+I P + P
Sbjct: 175 NVTSTLRINTTTNEIFYCTFRRLDPEENHTAELVIPELPLAHPPN 219
Score = 45.0 bits (106), Expect = 9e-05
Identities = 15/95 (15%), Positives = 32/95 (33%), Gaps = 4/95 (4%)
Query: 1145 DMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQTIYRNKSAKR--A 1202
+ E +T G PK IWT + +V + + ++ S R
Sbjct: 125 LVVDPVTSEHELTCQAEGYPKAEVIWTSSDHQVLSGKTTTTNSKREEKLFNVTSTLRINT 184
Query: 1203 TDSGSYTIQLVNTVGSDSASCKVYVVDKP--SPPQ 1235
T + + ++ + ++ + + P PP
Sbjct: 185 TTNEIFYCTFRRLDPEENHTAELVIPELPLAHPPN 219
Score = 37.3 bits (86), Expect = 0.031
Identities = 17/139 (12%), Positives = 33/139 (23%), Gaps = 26/139 (18%)
Query: 2089 EIIVPLRNANAIQNHNAQFQCTITGCPKP-----TISWLKGSREI--------------- 2128
+ VP N +C + + W + I
Sbjct: 3 TVTVPKDLYVVEYGSNMTIECKFPVEKQLDLAALIVYWEMEDKNIIQFVHGEEDLKVQHS 62
Query: 2129 TPSARHHIFAEGDTY---TLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNV 2185
+ R + + + L I V DA Y C ++ GG + + +
Sbjct: 63 SYRQRARLLKDQLSLGNAALQITDVKLQDAGVYRCM-ISYGGADYKRITVKVNAPYNKIN 121
Query: 2186 PPRFRDTAYFESDVVVVVC 2204
+ + C
Sbjct: 122 QR--ILVVDPVTSEHELTC 138
>1gl4_B Basement membrane-specific heparan sulfate proteoglycan core
protein; immunoglobulin-like domain, extracellular
matrix; HET: EPE; 2.0A {Mus musculus} SCOP: b.1.1.4
Length = 98
Score = 62.9 bits (153), Expect = 5e-12
Identities = 23/96 (23%), Positives = 35/96 (36%), Gaps = 7/96 (7%)
Query: 477 AAKAPEIIV-PLRNANAIQNHNAQFQCT-ITGCPKPTISWLKGSREITPSARHHIFAEGD 534
+K + V R+ + + F CT + P T+ W + PS + G
Sbjct: 6 PSKPIMVTVEEQRSQSVRPGADVTFICTAKSKSPAYTLVWTRLHNGKLPS--RAMDFNG- 62
Query: 535 TYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELII 570
L I +V DA YVC N + A L +
Sbjct: 63 --ILTIRNVQPSDAGTYVCTGSNMFAMDQGTATLHV 96
Score = 62.9 bits (153), Expect = 5e-12
Identities = 23/96 (23%), Positives = 35/96 (36%), Gaps = 7/96 (7%)
Query: 2084 AAKAPEIIV-PLRNANAIQNHNAQFQCT-ITGCPKPTISWLKGSREITPSARHHIFAEGD 2141
+K + V R+ + + F CT + P T+ W + PS + G
Sbjct: 6 PSKPIMVTVEEQRSQSVRPGADVTFICTAKSKSPAYTLVWTRLHNGKLPS--RAMDFNG- 62
Query: 2142 TYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELII 2177
L I +V DA YVC N + A L +
Sbjct: 63 --ILTIRNVQPSDAGTYVCTGSNMFAMDQGTATLHV 96
Score = 60.2 bits (146), Expect = 5e-11
Identities = 19/93 (20%), Positives = 28/93 (30%), Gaps = 8/93 (8%)
Query: 89 EKPDFIV--PLKDLVVPLGKLLTLQCEA-TGTPVPKCRWLRNGREISSGARYRVETAGGV 145
KP + + V G +T C A + +P W R R G+
Sbjct: 7 SKPIMVTVEEQRSQSVRPGADVTFICTAKSKSPAYTLVWTRLHNGKLPS---RAMDFNGI 63
Query: 146 FRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRV 178
L V D G Y C N ++ +
Sbjct: 64 --LTIRNVQPSDAGTYVCTGSNMFAMDQGTATL 94
Score = 60.2 bits (146), Expect = 5e-11
Identities = 19/93 (20%), Positives = 28/93 (30%), Gaps = 8/93 (8%)
Query: 1696 EKPDFIV--PLKDLVVPLGKLLTLQCEA-TGTPVPKCRWLRNGREISSGARYRVETAGGV 1752
KP + + V G +T C A + +P W R R G+
Sbjct: 7 SKPIMVTVEEQRSQSVRPGADVTFICTAKSKSPAYTLVWTRLHNGKLPS---RAMDFNGI 63
Query: 1753 FRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRV 1785
L V D G Y C N ++ +
Sbjct: 64 --LTIRNVQPSDAGTYVCTGSNMFAMDQGTATL 94
Score = 54.4 bits (131), Expect = 6e-09
Identities = 20/102 (19%), Positives = 31/102 (30%), Gaps = 7/102 (6%)
Query: 566 AELIIMTAPKFNVPPRFRDTAYFDKGENVVVK-IPFTGYPKPKITWYRDNEVIESGGHFH 624
A L + P R + G +V + P + W R + G
Sbjct: 1 APLAAPSKPIMVTVEEQRSQS-VRPGADVTFICTAKSKSPAYTLVWTRLH-----NGKLP 54
Query: 625 VETSERHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQI 666
+ + ILTIR+ D Y N MD + +
Sbjct: 55 SRAMDFNGILTIRNVQPSDAGTYVCTGSNMFAMDQGTATLHV 96
Score = 42.1 bits (99), Expect = 1e-04
Identities = 22/99 (22%), Positives = 36/99 (36%), Gaps = 7/99 (7%)
Query: 1130 APPCAPKITSDLSIRDMTVLAGEEFTIT-VPFSGRPKPTPIWTVNGDEVSPDGRIKFETS 1188
A P P + + R +V G + T S P T +WT + P + F
Sbjct: 4 AAPSKPIMVTVEEQRSQSVRPGADVTFICTAKSKSPAYTLVWTRLHNGKLPSRAMDFNGI 63
Query: 1189 ENQTIYRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYV 1227
TI + +D+G+Y N D + ++V
Sbjct: 64 --LTIRN----VQPSDAGTYVCTGSNMFAMDQGTATLHV 96
Score = 40.9 bits (96), Expect = 3e-04
Identities = 19/100 (19%), Positives = 31/100 (31%), Gaps = 9/100 (9%)
Query: 1412 PVIVEEQPNKPVMDLSGVRDITVKAGEDFSIH-VPFMAFPQPAAFWFANDSIIDDSDTRV 1470
P+ +P ++ + R +V+ G D + P W + S
Sbjct: 2 PLAAPSKP--IMVTVEEQRSQSVRPGADVTFICTAKSKSPAYTLVWTRLHNGKLPSRAMD 59
Query: 1471 HKQLTMNSASLVVKNSQRSDGGQYRLQLKNPAGFDTATLH 1510
+ L ++N Q SD G Y N D T
Sbjct: 60 ------FNGILTIRNVQPSDAGTYVCTGSNMFAMDQGTAT 93
Score = 32.1 bits (73), Expect = 0.37
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 242 FIKEIRKEDAGDYTVNLSNSSGSVSGTFTINI 273
I+ ++ DAG Y SN GT T+++
Sbjct: 65 TIRNVQPSDAGTYVCTGSNMFAMDQGTATLHV 96
Score = 32.1 bits (73), Expect = 0.37
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 1849 FIKEIRKEDAGDYTVNLSNSSGSVSGTFTINI 1880
I+ ++ DAG Y SN GT T+++
Sbjct: 65 TIRNVQPSDAGTYVCTGSNMFAMDQGTATLHV 96
>3qht_C Monobody YSMB-1; fibronectin type III, yeast small ubiquitin-like
modifier, S NOVO protein; 2.40A {Artificial gene}
Length = 97
Score = 62.8 bits (153), Expect = 7e-12
Identities = 25/97 (25%), Positives = 36/97 (37%), Gaps = 8/97 (8%)
Query: 670 PDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSW---IRVGNTRFTT 726
P V SL + W A S+++ Y + E +S V + +T
Sbjct: 5 SSVPTKLEVVAATPTSLLISWDAS----SSSVSYYRITYGETGGNSPVQEFTVPGSS-ST 59
Query: 727 MAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTK 763
I+GLSPG Y VYA Y S + I +
Sbjct: 60 ATISGLSPGVDYTITVYAYYSYYDLYYSYSPSSINYR 96
Score = 59.3 bits (144), Expect = 1e-10
Identities = 22/98 (22%), Positives = 31/98 (31%), Gaps = 8/98 (8%)
Query: 1231 PSPPQGPLDVSDITPESCSLSWKPPLDDGGSPITNYVVEKYESATGFWSKLSSFVRSPA- 1289
S P L+V TP S +SW S ++ Y + Y G V +
Sbjct: 5 SSVPTK-LEVVAATPTSLLISWDAS----SSSVSYYRIT-YGETGGNSPVQEFTVPGSSS 58
Query: 1290 -YDVFGLETNRQYRFRVRAENQYGVSEPLELDNSITAK 1326
+ GL Y V A Y +SI +
Sbjct: 59 TATISGLSPGVDYTITVYAYYSYYDLYYSYSPSSINYR 96
Score = 54.7 bits (132), Expect = 4e-09
Identities = 21/96 (21%), Positives = 32/96 (33%), Gaps = 4/96 (4%)
Query: 378 PSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQI 437
S P V + +SWD S + Y I E G ++ + + S
Sbjct: 5 SSVPTKLEVVAATPTSLLISWDAS----SSSVSYYRITYGETGGNSPVQEFTVPGSSSTA 60
Query: 438 NIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIK 473
I L G Y VYA S + +S+ +
Sbjct: 61 TISGLSPGVDYTITVYAYYSYYDLYYSYSPSSINYR 96
Score = 54.7 bits (132), Expect = 4e-09
Identities = 21/96 (21%), Positives = 32/96 (33%), Gaps = 4/96 (4%)
Query: 1985 PSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQI 2044
S P V + +SWD S + Y I E G ++ + + S
Sbjct: 5 SSVPTKLEVVAATPTSLLISWDAS----SSSVSYYRITYGETGGNSPVQEFTVPGSSSTA 60
Query: 2045 NIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIK 2080
I L G Y VYA S + +S+ +
Sbjct: 61 TISGLSPGVDYTITVYAYYSYYDLYYSYSPSSINYR 96
Score = 52.4 bits (126), Expect = 3e-08
Identities = 14/90 (15%), Positives = 30/90 (33%), Gaps = 6/90 (6%)
Query: 274 TGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWI-CISTTCH 332
+ + P L+V T + + W+ V++Y + + + +
Sbjct: 2 SSVSSVPTK-LEVVAATPTSLLISWDAS--SS--SVSYYRITYGETGGNSPVQEFTVPGS 56
Query: 333 DTTFIVQGLTEGQEYLFHVMAVNENGMGPP 362
+T + GL+ G +Y V A
Sbjct: 57 SSTATISGLSPGVDYTITVYAYYSYYDLYY 86
Score = 52.4 bits (126), Expect = 3e-08
Identities = 14/90 (15%), Positives = 30/90 (33%), Gaps = 6/90 (6%)
Query: 1881 TGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWI-CISTTCH 1939
+ + P L+V T + + W+ V++Y + + + +
Sbjct: 2 SSVSSVPTK-LEVVAATPTSLLISWDAS--SS--SVSYYRITYGETGGNSPVQEFTVPGS 56
Query: 1940 DTTFIVQGLTEGQEYLFHVMAVNENGMGPP 1969
+T + GL+ G +Y V A
Sbjct: 57 SSTATISGLSPGVDYTITVYAYYSYYDLYY 86
Score = 47.8 bits (114), Expect = 1e-06
Identities = 17/90 (18%), Positives = 24/90 (26%), Gaps = 11/90 (12%)
Query: 902 PHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTKVSSYVTTP--- 958
P L SL + W S ++ Y + Y T T P
Sbjct: 5 SSVPTKLEVVAATPTSLLISWDAS----SSSVSYYRIT---YGETGGNSPVQEFTVPGSS 57
Query: 959 -FVRVRNLAIGSTYEFRVMAENQYGLSKPA 987
+ L+ G Y V A Y +
Sbjct: 58 STATISGLSPGVDYTITVYAYYSYYDLYYS 87
Score = 46.2 bits (110), Expect = 4e-06
Identities = 16/122 (13%), Positives = 32/122 (26%), Gaps = 36/122 (29%)
Query: 1001 VPGAPGAPKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTS 1060
V P + V +T S+ + W S + Y + + ++ +P +S
Sbjct: 4 VSSVPTKLEVVAATPTSLLISWDAS----SSSVSYYRITYGETGGNSPVQEFT--VPGSS 57
Query: 1061 LKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPWS 1120
+ + L +Y V A + +S
Sbjct: 58 STATI------------------------------SGLSPGVDYTITVYAYYSYYDLYYS 87
Query: 1121 SS 1122
S
Sbjct: 88 YS 89
Score = 32.0 bits (73), Expect = 0.39
Identities = 13/61 (21%), Positives = 21/61 (34%), Gaps = 2/61 (3%)
Query: 22 YIIERREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPSICTTPVK 81
Y I E GG ++ + ++ L G DY + A + S +P
Sbjct: 35 YRITYGETGGNSPVQEFTVPGSSSTATISGLSPGVDYTITVYAYYSYYDLYYS--YSPSS 92
Query: 82 I 82
I
Sbjct: 93 I 93
Score = 31.2 bits (71), Expect = 0.72
Identities = 17/131 (12%), Positives = 32/131 (24%), Gaps = 51/131 (38%)
Query: 1559 VDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEG 1618
V +T S+ + W S + Y + + ++
Sbjct: 14 VAATPTSLLISWDAS----SSSVSYYRITYGETGGNSPVQ-------------------- 49
Query: 1619 KSIGSERGSTAQFLEREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKS 1678
E V G+ + ++ L G DY + A +
Sbjct: 50 --------------EFTVPGS-----------SSTATISGLSPGVDYTITVYAYYSYYDL 84
Query: 1679 EPSICTTPVKI 1689
S +P I
Sbjct: 85 YYS--YSPSSI 93
Score = 28.5 bits (64), Expect = 6.8
Identities = 7/38 (18%), Positives = 15/38 (39%), Gaps = 4/38 (10%)
Query: 1330 TVPDPPGQPQIVDWDTNNATLMWDRPRTDGGSKIQGYK 1367
+V P + ++V + + WD S + Y+
Sbjct: 3 SVSSVPTKLEVVAATPTSLLISWDAS----SSSVSYYR 36
>3bpo_C Interleukin-13 receptor alpha-1 chain; IL4, IL13, IL4R, IL13R,
cytokine, glycoprotein, IM response, membrane,
phosphoprotein, secreted; HET: NAG; 3.00A {Homo sapiens}
PDB: 3bpn_C*
Length = 314
Score = 68.0 bits (165), Expect = 7e-12
Identities = 27/220 (12%), Positives = 63/220 (28%), Gaps = 24/220 (10%)
Query: 254 YTVNLSNSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYV 313
+ N S + G P + L W P + + + +
Sbjct: 74 CSTNESEKPSILVEKCISPPEGDPESAVTELQCIWHNLSYMKCSWLPGR-NTSPDTNYTL 132
Query: 314 VERRDISMPHWICISTTCHDTT----FIVQGLTEG--QEYLFHVMAVNENGMGPPLEGIN 367
C + F + + + +++ +M + G P I
Sbjct: 133 YYWHRSLEKIHQCENIFREGQYFGCSFDLTKVKDSSFEQHSVQIMVKDNAGKIKPSFNIV 192
Query: 368 PIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRV 427
P+ + KP PP I ++ D + + W+ P + + Y ++ + ++
Sbjct: 193 PL---TSRVKPDPPHIKNLSFHNDD-LYVQWENPQNFISRCLF-YEVEVNNSQTETHNVF 247
Query: 428 NV------------AICAPSQINIPNLIEGRQYEFRVYAQ 455
V + S +P ++ R+ +
Sbjct: 248 YVQEAKCENPEFERNVENTSCFMVPGVLPDTLNTVRIRVK 287
Score = 68.0 bits (165), Expect = 7e-12
Identities = 27/220 (12%), Positives = 63/220 (28%), Gaps = 24/220 (10%)
Query: 1861 YTVNLSNSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYV 1920
+ N S + G P + L W P + + + +
Sbjct: 74 CSTNESEKPSILVEKCISPPEGDPESAVTELQCIWHNLSYMKCSWLPGR-NTSPDTNYTL 132
Query: 1921 VERRDISMPHWICISTTCHDTT----FIVQGLTEG--QEYLFHVMAVNENGMGPPLEGIN 1974
C + F + + + +++ +M + G P I
Sbjct: 133 YYWHRSLEKIHQCENIFREGQYFGCSFDLTKVKDSSFEQHSVQIMVKDNAGKIKPSFNIV 192
Query: 1975 PIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRV 2034
P+ + KP PP I ++ D + + W+ P + + Y ++ + ++
Sbjct: 193 PL---TSRVKPDPPHIKNLSFHNDD-LYVQWENPQNFISRCLF-YEVEVNNSQTETHNVF 247
Query: 2035 NV------------AICAPSQINIPNLIEGRQYEFRVYAQ 2062
V + S +P ++ R+ +
Sbjct: 248 YVQEAKCENPEFERNVENTSCFMVPGVLPDTLNTVRIRVK 287
Score = 60.3 bits (145), Expect = 2e-09
Identities = 28/220 (12%), Positives = 50/220 (22%), Gaps = 12/220 (5%)
Query: 279 PPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHDTTFIV 338
PP+ L VS T WNPP+ Y D I
Sbjct: 5 PPVTNLSVSVENLCTVIWTWNPPEGASSNCSLWYFSHFGDKQDKK-----IAPETRRSIE 59
Query: 339 QGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSW 398
L E N P + + D S ++ SW
Sbjct: 60 VPLNERICLQVGSQCST-NESEKPSILVEKCISPPEGDPESAVTELQCIWHNLSYMKCSW 118
Query: 399 DKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPS----QINIPNLIEGRQYEFRVYA 454
+ S Y + + + ++ + + + V
Sbjct: 119 LPGRN--TSPDTNYTLYYWHRSLEKIHQCENIFREGQYFGCSFDLTKVKDSSFEQHSVQI 176
Query: 455 QNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQ 494
+ + N V + + P I + + +
Sbjct: 177 MVKDNAGKIKPSFNIVPLTSRVKPDPPHIKNLSFHNDDLY 216
Score = 60.3 bits (145), Expect = 2e-09
Identities = 28/220 (12%), Positives = 50/220 (22%), Gaps = 12/220 (5%)
Query: 1886 PPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHDTTFIV 1945
PP+ L VS T WNPP+ Y D I
Sbjct: 5 PPVTNLSVSVENLCTVIWTWNPPEGASSNCSLWYFSHFGDKQDKK-----IAPETRRSIE 59
Query: 1946 QGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSW 2005
L E N P + + D S ++ SW
Sbjct: 60 VPLNERICLQVGSQCST-NESEKPSILVEKCISPPEGDPESAVTELQCIWHNLSYMKCSW 118
Query: 2006 DKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPS----QINIPNLIEGRQYEFRVYA 2061
+ S Y + + + ++ + + + V
Sbjct: 119 LPGRN--TSPDTNYTLYYWHRSLEKIHQCENIFREGQYFGCSFDLTKVKDSSFEQHSVQI 176
Query: 2062 QNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQ 2101
+ + N V + + P I + + +
Sbjct: 177 MVKDNAGKIKPSFNIVPLTSRVKPDPPHIKNLSFHNDDLY 216
Score = 58.4 bits (140), Expect = 8e-09
Identities = 17/135 (12%), Positives = 30/135 (22%), Gaps = 12/135 (8%)
Query: 1230 KPSPPQGPLDVSDITPESCSLSWKPPLDDGGSPITNYVVEKYESATGFWSKLSSFVRSPA 1289
+ PP L VS + +W PP N + + K + +
Sbjct: 2 ETQPPVTNLSVSVENLCTVIWTWNPPEGASS----NCSLWYFSHFGDKQDKKIA-PETRR 56
Query: 1290 YDVFGLETNRQYRFRVRAENQYGVSEPLELDNSITAKFPFTVPDPPGQPQIVDWDTNNAT 1349
L + + + DP + +N +
Sbjct: 57 SIEVPLNERICLQVGSQCSTNESEKP----SILVEKCISPPEGDPESAVTELQCIWHNLS 112
Query: 1350 LM---WDRPRTDGGS 1361
M W R
Sbjct: 113 YMKCSWLPGRNTSPD 127
Score = 58.0 bits (139), Expect = 1e-08
Identities = 31/320 (9%), Positives = 72/320 (22%), Gaps = 57/320 (17%)
Query: 672 PPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSWIRVGNTRFTTMAITG 731
P +V ++ W P N + H +
Sbjct: 6 PVTNLSVSVENLCTVIWTWNPPEGASS----NCSLWYFSHFGDKQDKKIAPETRRSIEVP 61
Query: 732 LSPGHQYEFRVYAENVYGRSDPSTTSDLITTKDTFKKQIKKRQYDFDETGKKIRGKADEK 791
L+ + I+ G +
Sbjct: 62 LNERICLQVGSQCSTNESEKPSILVEKCISP---------------------PEGDPESA 100
Query: 792 VSDYDQYVFDIYSKYV---PQPVDIKTSSVYDHYDILEEIGTGAFGVVHRCRERKTGNIF 848
V++ ++ P ++ +Y + +H+C +
Sbjct: 101 VTELQCIWHNLSYMKCSWLPGRNTSPDTNYTLYYW------HRSLEKIHQCENIFREGQY 154
Query: 849 AAKFIPVSHNLEKELIRKEIDIMNQLHHPKLINLHDAFEDDDEMVLIFEVLDRPHPPENL 908
++ + + + IM + + K+ + +P PP
Sbjct: 155 FGCSFDLTKVKDSSFEQHSVQIMVKDNAGKIKPSFNIVP--------LTSRVKPDPPHIK 206
Query: 909 HADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTKV-------------SSYV 955
+ F D L + W P++ + Y VE + + +
Sbjct: 207 NL-SFHNDDLYVQWENPQNFISRCLF-YEVEVNNSQTETHNVFYVQEAKCENPEFERNVE 264
Query: 956 TTPFVRVRNLAIGSTYEFRV 975
T V + + R+
Sbjct: 265 NTSCFMVPGVLPDTLNTVRI 284
Score = 54.5 bits (130), Expect = 2e-07
Identities = 32/230 (13%), Positives = 61/230 (26%), Gaps = 38/230 (16%)
Query: 902 PHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTKVSSYVTT---- 957
L + W P R+ S TNY + + + +
Sbjct: 98 ESAVTELQCIWHNLSYMKCSWLPGRN--TSPDTNYTLYYWHRSLEKIHQCENIFREGQYF 155
Query: 958 --PFVRVR-NLAIGSTYEFRVMAENQYGLSKPALTIDPIKAKHPFDVPGAPGAPKGVDST 1014
F + + + ++M ++ G KP+ I P P K +
Sbjct: 156 GCSFDLTKVKDSSFEQHSVQIMVKDNAGKIKPS---FNIVPLTSRVKPDPP-HIKNLSFH 211
Query: 1015 EDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEGKSIG 1074
D + + W P++ + Y VE + V +
Sbjct: 212 NDDLYVQWENPQNFISRCLF-YEVEVNNSQTETH-----------------NVFYVQEAK 253
Query: 1075 SERGSTAQFLELLLMFIPNRVTSLIENHEYEFRV-CAVN---AAGQGPWS 1120
E + +E F+ V ++ + R+ N WS
Sbjct: 254 CENPEFERNVENTSCFM---VPGVLPDTLNTVRIRVKTNKLCYEDDKLWS 300
Score = 53.0 bits (126), Expect = 5e-07
Identities = 24/242 (9%), Positives = 58/242 (23%), Gaps = 39/242 (16%)
Query: 1093 NRVTSLIENHEYEFRVCAVNAAG--QGPWSSSSDIIMCCAPPCAPKITSDLSIRDMTVLA 1150
+ L E + P A ++ +
Sbjct: 57 SIEVPLNERICLQVGSQCSTNESEKPSILVEKCISPPEGDPESAV--------TELQCIW 108
Query: 1151 GEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFET-------SENQTIYRNKSAKRAT 1203
+ + + T T K + + + + +
Sbjct: 109 HNLSYMKCSWL-PGRNTSPDTNYTLYYWHRSLEKIHQCENIFREGQYFGCSFDLTKVKDS 167
Query: 1204 DSGSYTIQLVNT-----VGSDSASCKVYVVDKPSPPQGPLDVSDITPESCSLSWKPPLDD 1258
+++Q++ + + KP PP ++S + + W+ P +
Sbjct: 168 SFEQHSVQIMVKDNAGKIKPSFNIVPLTSRVKPDPPHI-KNLS-FHNDDLYVQWENPQNF 225
Query: 1259 GGSPITNYVVEKYESATGFWSKL-------------SSFVRSPAYDVFGLETNRQYRFRV 1305
+ Y VE S T + + + + V G+ + R+
Sbjct: 226 ISRCLF-YEVEVNNSQTETHNVFYVQEAKCENPEFERNVENTSCFMVPGVLPDTLNTVRI 284
Query: 1306 RA 1307
R
Sbjct: 285 RV 286
Score = 52.6 bits (125), Expect = 8e-07
Identities = 20/147 (13%), Positives = 37/147 (25%), Gaps = 8/147 (5%)
Query: 904 PPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTKVSSYVTTPFVRVR 963
P NL ++ W PP + Y D +
Sbjct: 6 PVTNLSVSVENLCTVIWTWNPPEGASSNCSLWYFSHFGDKQDKKIAPETRRSI-----EV 60
Query: 964 NLAIGSTYEFRVMAENQYGLSKPALTIDPIKAKHPFDVPGAPGAPKGVDSTEDSISLVWS 1023
L + KP++ ++ + D A + + + W
Sbjct: 61 PLNERICLQVGSQCSTNES-EKPSILVEKCISPPEGDPESAVTELQCIWHNLSYMKCSWL 119
Query: 1024 KPRHDGGSPIQRYIVEKRLISDDKWIK 1050
R+ SP Y + S +K +
Sbjct: 120 PGRN--TSPDTNYTLYYWHRSLEKIHQ 144
Score = 48.0 bits (113), Expect = 2e-05
Identities = 21/142 (14%), Positives = 44/142 (30%), Gaps = 18/142 (12%)
Query: 634 LTIRDASNVDTAPYRVVAENDLGM---DSAIVKIQISDRPDPPQFPTVEDIGHDSLALVW 690
LT S+ + +++ +++ G IV + +PDPP + +D L + W
Sbjct: 161 LTKVKDSSFEQHSVQIMVKDNAGKIKPSFNIVPLTSRVKPDPPHIKNLS-FHNDDLYVQW 219
Query: 691 RAP-------------IWDGGSNITNYIVEKREHPMSSWIRVGNTRFTTMAITGLSPGHQ 737
P + + + N + + + + G+ P
Sbjct: 220 ENPQNFISRCLFYEVEVNNSQTETHNVFYVQEAKCENPEFERNVENTSCFMVPGVLPDTL 279
Query: 738 YEFRVYA-ENVYGRSDPSTTSD 758
R+ N D S+
Sbjct: 280 NTVRIRVKTNKLCYEDDKLWSN 301
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase,
transferase; HET: ANP; 2.60A {Plasmodium falciparum}
PDB: 2pmn_X* 2pmo_X*
Length = 348
Score = 68.2 bits (167), Expect = 8e-12
Identities = 14/95 (14%), Positives = 33/95 (34%), Gaps = 19/95 (20%)
Query: 820 DHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFI-----------------PVSHNLEKE 862
+ Y I+ + G F + C + +A K +S + +
Sbjct: 31 NDYRIIRTLNQGKFNKIILCEK--DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYD 88
Query: 863 LIRKEIDIMNQLHHPKLINLHDAFEDDDEMVLIFE 897
+ E+ I+ + + + + DE+ +I+E
Sbjct: 89 DFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYE 123
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase,
serine/threonine kinase, cyclin clathrine, membrane
trafficking, structural genomics; 2.10A {Homo sapiens}
Length = 337
Score = 68.2 bits (167), Expect = 8e-12
Identities = 18/89 (20%), Positives = 36/89 (40%), Gaps = 5/89 (5%)
Query: 804 SKYVPQPVDIKTSSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKEL 863
S +V Q V++ + + G F V+ ++ +G +A K + + +
Sbjct: 16 SDFVGQTVELGE----LRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRA 71
Query: 864 IRKEIDIMNQL-HHPKLINLHDAFEDDDE 891
I +E+ M +L HP ++ A E
Sbjct: 72 IIQEVCFMKKLSGHPNIVQFCSAASIGKE 100
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling,
transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A
3zuu_A 3uc4_A 3ujg_A 3udb_A
Length = 361
Score = 68.2 bits (167), Expect = 9e-12
Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Query: 810 PVDIKTSSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEID 869
P+D+ D YD +++IG+G FGV R++ T + A K+I E +++EI
Sbjct: 10 PLDMPIMHDSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGA-AIDENVQREII 68
Query: 870 IMNQLHHPKLINLHDAFEDDDEMVLIFE 897
L HP ++ + + +I E
Sbjct: 69 NHRSLRHPNIVRFKEVILTPTHLAIIME 96
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1;
protein-nucleotide complex, ATP-binding, endoplasmic
reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces
cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A*
3sdj_A*
Length = 434
Score = 68.3 bits (167), Expect = 1e-11
Identities = 15/84 (17%), Positives = 33/84 (39%), Gaps = 5/84 (5%)
Query: 815 TSSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQL 874
S+ + + +G G+ G V + G A K + + ++ EI ++ +
Sbjct: 10 EQSLKNLVVSEKILGYGSSGTV-VFQGSFQGRPVAVKRMLIDFC---DIALMEIKLLTES 65
Query: 875 -HHPKLINLHDAFEDDDEMVLIFE 897
HP +I + + D + + E
Sbjct: 66 DDHPNVIRYYCSETTDRFLYIALE 89
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer,
leukemia, transferase, ATP-binding, proto- oncogene,
phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Length = 312
Score = 66.6 bits (163), Expect = 2e-11
Identities = 23/101 (22%), Positives = 37/101 (36%), Gaps = 10/101 (9%)
Query: 807 VPQPVDIKTSSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRK 866
P P + Y + +G G FG V A K IP + L +
Sbjct: 18 TPPPGGKDREAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSD 77
Query: 867 ------EIDIMNQLH----HPKLINLHDAFEDDDEMVLIFE 897
E+ ++ ++ HP +I L D FE + +L+ E
Sbjct: 78 SVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQEGFMLVLE 118
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase,
phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus
musculus}
Length = 332
Score = 66.1 bits (161), Expect = 3e-11
Identities = 18/79 (22%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query: 816 SSVY-DHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHN-LEKELIRKEIDIMNQ 873
+S Y ++ ++ +G G FGVV + + +A K I + + L +E + +E+ + +
Sbjct: 1 ASRYLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAK 60
Query: 874 LHHPKLINLHDAFEDDDEM 892
L HP ++ +A+ +
Sbjct: 61 LEHPGIVRYFNAWLETPPE 79
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3;
immunoglobulin, VCBP, V-type, V SET, immune system;
1.85A {Branchiostoma floridae}
Length = 250
Score = 64.5 bits (156), Expect = 4e-11
Identities = 34/238 (14%), Positives = 53/238 (22%), Gaps = 61/238 (25%)
Query: 483 IIVPLRNANAIQNHNAQFQCTIT---GCPKPTISWLKGSREITPSA-------------- 525
+ + C+ P ISWLKG+ +
Sbjct: 5 VRTTHTEVEVHAGGTVELPCSYQLANDTQPPVISWLKGASPDRSTKVFKGNYNWQGEGLG 64
Query: 526 ----------------RHHIFAEGDTYTLIINSVYGVDADEYVCRAVNK------GGVKS 563
R + TL + V+ D Y C+ G
Sbjct: 65 FVESDSYKESFGDFLGRASVANLAA-PTLRLTHVHPQDGGRYWCQVAQWSIRTEFGLDAK 123
Query: 564 TKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHF 623
+ + P NV + D+G ++ + P T +TWY E+
Sbjct: 124 SVVLKVTGHTPSNNVHVSTAEVVQVDEGNDITMTCPCTDCANANVTWYTGPTFFENYETG 183
Query: 624 HVETSERHAI---------------------LTIRDASNVDTAPYRVVAENDLGMDSA 660
+ L IR A D G A
Sbjct: 184 TYQPLANKNQFGITWFSSEIAGRASFSGARNLVIRAAKITDAGRVWCELATGQGELDA 241
Score = 61.5 bits (148), Expect = 5e-10
Identities = 19/168 (11%), Positives = 39/168 (23%), Gaps = 22/168 (13%)
Query: 426 RVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIK-DPMAAKAPEII 484
R +VA A + + ++ + + + + SV +K +
Sbjct: 81 RASVANLAAPTLRLTHVHPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVTGHTPSNNVHV 140
Query: 485 VPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHI--------------- 529
+ ++ C T C ++W G
Sbjct: 141 STAEVVQVDEGNDITMTCPCTDCANANVTWYTGPTFFENYETGTYQPLANKNQFGITWFS 200
Query: 530 ------FAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIM 571
+ L+I + DA C G I+
Sbjct: 201 SEIAGRASFSGARNLVIRAAKITDAGRVWCELATGQGELDADRSSTIL 248
Score = 61.5 bits (148), Expect = 5e-10
Identities = 19/168 (11%), Positives = 39/168 (23%), Gaps = 22/168 (13%)
Query: 2033 RVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIK-DPMAAKAPEII 2091
R +VA A + + ++ + + + + SV +K +
Sbjct: 81 RASVANLAAPTLRLTHVHPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVTGHTPSNNVHV 140
Query: 2092 VPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHI--------------- 2136
+ ++ C T C ++W G
Sbjct: 141 STAEVVQVDEGNDITMTCPCTDCANANVTWYTGPTFFENYETGTYQPLANKNQFGITWFS 200
Query: 2137 ------FAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIM 2178
+ L+I + DA C G I+
Sbjct: 201 SEIAGRASFSGARNLVIRAAKITDAGRVWCELATGQGELDADRSSTIL 248
Score = 59.5 bits (143), Expect = 2e-09
Identities = 32/241 (13%), Positives = 58/241 (24%), Gaps = 62/241 (25%)
Query: 95 VPLKDLVVPLGKLLTLQCE---ATGTPVPKCRWLRNGR----EISSGARYRVETAGGVFR 147
++ V G + L C A T P WL+ Y + G F
Sbjct: 7 TTHTEVEVHAGGTVELPCSYQLANDTQPPVISWLKGASPDRSTKVFKGNYNWQGEGLGFV 66
Query: 148 -------------------------LHFNEVTDVDNGDYTCEAYNS-----VGFAHTSSR 177
L V D G Y C+ G S
Sbjct: 67 ESDSYKESFGDFLGRASVANLAAPTLRLTHVHPQDGGRYWCQVAQWSIRTEFGLDAKSVV 126
Query: 178 VKI----GTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFT 233
+K+ + + + EG++ + V+ ++ + +
Sbjct: 127 LKVTGHTPSNNVHVSTAEVVQVDEGNDITMTCPCTDCANANVTWYTGPTFFENYETGTYQ 186
Query: 234 VLDDYII---------------------IFIKEIRKEDAGDYTVNLSNSSGSVSGTFTIN 272
L + + I+ + DAG L+ G + +
Sbjct: 187 PLANKNQFGITWFSSEIAGRASFSGARNLVIRAAKITDAGRVWCELATGQGELDADRSST 246
Query: 273 I 273
I
Sbjct: 247 I 247
Score = 59.5 bits (143), Expect = 2e-09
Identities = 32/241 (13%), Positives = 58/241 (24%), Gaps = 62/241 (25%)
Query: 1702 VPLKDLVVPLGKLLTLQCE---ATGTPVPKCRWLRNGR----EISSGARYRVETAGGVFR 1754
++ V G + L C A T P WL+ Y + G F
Sbjct: 7 TTHTEVEVHAGGTVELPCSYQLANDTQPPVISWLKGASPDRSTKVFKGNYNWQGEGLGFV 66
Query: 1755 -------------------------LHFNEVTDVDNGDYTCEAYNS-----VGFAHTSSR 1784
L V D G Y C+ G S
Sbjct: 67 ESDSYKESFGDFLGRASVANLAAPTLRLTHVHPQDGGRYWCQVAQWSIRTEFGLDAKSVV 126
Query: 1785 VKI----GTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFT 1840
+K+ + + + EG++ + V+ ++ + +
Sbjct: 127 LKVTGHTPSNNVHVSTAEVVQVDEGNDITMTCPCTDCANANVTWYTGPTFFENYETGTYQ 186
Query: 1841 VLDDYII---------------------IFIKEIRKEDAGDYTVNLSNSSGSVSGTFTIN 1879
L + + I+ + DAG L+ G + +
Sbjct: 187 PLANKNQFGITWFSSEIAGRASFSGARNLVIRAAKITDAGRVWCELATGQGELDADRSST 246
Query: 1880 I 1880
I
Sbjct: 247 I 247
Score = 58.0 bits (139), Expect = 8e-09
Identities = 14/116 (12%), Positives = 21/116 (18%), Gaps = 21/116 (18%)
Query: 86 VGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAG-- 143
+ + + V G +T+ C T W + +
Sbjct: 132 HTPSNNVHVSTAEVVQVDEGNDITMTCPCTDCANANVTWYTGPTFFENYETGTYQPLANK 191
Query: 144 -------------------GVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKI 180
G L D G CE G I
Sbjct: 192 NQFGITWFSSEIAGRASFSGARNLVIRAAKITDAGRVWCELATGQGELDADRSSTI 247
Score = 58.0 bits (139), Expect = 8e-09
Identities = 14/116 (12%), Positives = 21/116 (18%), Gaps = 21/116 (18%)
Query: 1693 VGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAG-- 1750
+ + + V G +T+ C T W + +
Sbjct: 132 HTPSNNVHVSTAEVVQVDEGNDITMTCPCTDCANANVTWYTGPTFFENYETGTYQPLANK 191
Query: 1751 -------------------GVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKI 1787
G L D G CE G I
Sbjct: 192 NQFGITWFSSEIAGRASFSGARNLVIRAAKITDAGRVWCELATGQGELDADRSSTI 247
Score = 50.7 bits (120), Expect = 2e-06
Identities = 23/152 (15%), Positives = 51/152 (33%), Gaps = 24/152 (15%)
Query: 1383 SKIRPT-SSTVYCKDTTMNSSNSEPGKQSGPVI--VEEQPNKPVMDLSGVRDITVKAGED 1439
+ + P +C+ S +E G + V+ V + +S + V G D
Sbjct: 95 THVHPQDGGRYWCQ-VAQWSIRTEFGLDAKSVVLKVTGHTPSNNVHVSTAEVVQVDEGND 153
Query: 1440 FSIHVPFMAFPQPAAFWFANDSIIDDSDTRVHKQLT--------------------MNSA 1479
++ P W+ + ++ +T ++ L +
Sbjct: 154 ITMTCPCTDCANANVTWYTGPTFFENYETGTYQPLANKNQFGITWFSSEIAGRASFSGAR 213
Query: 1480 SLVVKNSQRSDGGQYRLQLKNPAGFDTATLHS 1511
+LV++ ++ +D G+ +L G A S
Sbjct: 214 NLVIRAAKITDAGRVWCELATGQGELDADRSS 245
Score = 41.1 bits (95), Expect = 0.002
Identities = 18/147 (12%), Positives = 29/147 (19%), Gaps = 34/147 (23%)
Query: 2090 IIVPLRNANAIQNHNAQFQCTIT---GCPKPTISWLKGSREITPSA-------------- 2132
+ + C+ P ISWLKG+ +
Sbjct: 5 VRTTHTEVEVHAGGTVELPCSYQLANDTQPPVISWLKGASPDRSTKVFKGNYNWQGEGLG 64
Query: 2133 ----------------RHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELI 2176
R + TL + V+ D Y C+ +
Sbjct: 65 FVESDSYKESFGDFLGRASVANLAA-PTLRLTHVHPQDGGRYWCQVAQWSIRTEFGLDAK 123
Query: 2177 IMTAPKFNVPPRFRDTAYFESDVVVVV 2203
+ P V V
Sbjct: 124 SVVLKVTGHTPSNNVHVSTAEVVQVDE 150
Score = 38.4 bits (88), Expect = 0.020
Identities = 13/106 (12%), Positives = 26/106 (24%), Gaps = 20/106 (18%)
Query: 1144 RDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQTIYRNKSAK--- 1200
+ V G + T+T P + W ++ N+ +
Sbjct: 144 EVVQVDEGNDITMTCPCTDCANANVTWYTGPTFFENYETGTYQPLANKNQFGITWFSSEI 203
Query: 1201 -----------------RATDSGSYTIQLVNTVGSDSASCKVYVVD 1229
+ TD+G +L G A ++
Sbjct: 204 AGRASFSGARNLVIRAAKITDAGRVWCELATGQGELDADRSSTILK 249
Score = 29.9 bits (66), Expect = 8.6
Identities = 10/85 (11%), Positives = 22/85 (25%), Gaps = 7/85 (8%)
Query: 591 GENVVVK---IPFTGYPKPKITWYRDNEVIES----GGHFHVETSERHAILTIRDASNVD 643
G V + P I+W + S G+++ + + + +
Sbjct: 17 GGTVELPCSYQLANDTQPPVISWLKGASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFG 76
Query: 644 TAPYRVVAENDLGMDSAIVKIQISD 668
R N + + D
Sbjct: 77 DFLGRASVANLAAPTLRLTHVHPQD 101
>1x5j_A Neogenin; RGM binding, fibronectin type III domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
b.1.2.1
Length = 113
Score = 61.0 bits (148), Expect = 5e-11
Identities = 23/100 (23%), Positives = 38/100 (38%), Gaps = 4/100 (4%)
Query: 670 PDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITN---YIVEKREH-PMSSWIRVGNTRFT 725
PP + HD++ + W IT+ Y V + + P ++ + N
Sbjct: 9 MMPPVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTKYKNANATTL 68
Query: 726 TMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKDT 765
+ +TGL P YEF V S S T+ T + +
Sbjct: 69 SYLVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTTFELS 108
Score = 57.5 bits (139), Expect = 8e-10
Identities = 21/108 (19%), Positives = 33/108 (30%), Gaps = 6/108 (5%)
Query: 902 PHPPENLHADEFAGDSLTLYWTPPRDNGGSEITN---YVVEKKDYNSTVWTKVSSYVTTP 958
PP + A + D++ + W +IT+ Y V K ++ TT
Sbjct: 9 MMPPVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTKYKNANATTL 68
Query: 959 FVRVRNLAIGSTYEFRVMAENQYGLSKPALTIDPIKAKHPFDVPGAPG 1006
V L + YEF VM S + + G
Sbjct: 69 SYLVTGLKPNTLYEFSVMVTKGRRSSTWS---MTAHGTTFELSGPSSG 113
Score = 56.4 bits (136), Expect = 2e-09
Identities = 17/91 (18%), Positives = 31/91 (34%), Gaps = 3/91 (3%)
Query: 1229 DKPSPPQGPLDVSDITPESCSLSWKPPLDDGGSPITN---YVVEKYESATGFWSKLSSFV 1285
P P + S ++ ++ ++W IT+ Y V + ++
Sbjct: 6 SGPMMPPVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTKYKNANA 65
Query: 1286 RSPAYDVFGLETNRQYRFRVRAENQYGVSEP 1316
+ +Y V GL+ N Y F V S
Sbjct: 66 TTLSYLVTGLKPNTLYEFSVMVTKGRRSSTW 96
Score = 54.8 bits (132), Expect = 7e-09
Identities = 19/114 (16%), Positives = 34/114 (29%), Gaps = 8/114 (7%)
Query: 274 TGLPGPPIGPLDV--SEITKHTCTLHWNPP---KYDGGLKVTHYVVERRDISMPHWICIS 328
+G GP + P+ V S ++ T + W K+ +Y V + + +
Sbjct: 3 SGSSGPMMPPVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTKYKN 62
Query: 329 TTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPG 382
+++V GL Y F VM + G
Sbjct: 63 ANATTLSYLVTGLKPNTLYEFSVMVTKGRRSSTWSM---TAHGTTFELSGPSSG 113
Score = 54.8 bits (132), Expect = 7e-09
Identities = 19/114 (16%), Positives = 34/114 (29%), Gaps = 8/114 (7%)
Query: 1881 TGLPGPPIGPLDV--SEITKHTCTLHWNPP---KYDGGLKVTHYVVERRDISMPHWICIS 1935
+G GP + P+ V S ++ T + W K+ +Y V + + +
Sbjct: 3 SGSSGPMMPPVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTKYKN 62
Query: 1936 TTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPG 1989
+++V GL Y F VM + G
Sbjct: 63 ANATTLSYLVTGLKPNTLYEFSVMVTKGRRSSTWSM---TAHGTTFELSGPSSG 113
Score = 48.7 bits (116), Expect = 9e-07
Identities = 16/97 (16%), Positives = 26/97 (26%), Gaps = 5/97 (5%)
Query: 373 SPYDKPS-PPGIPVVTQVGGDFVNLSWDKPLDDGGSRI---QGYWIDKHEVGSDAWQRVN 428
S P PP + + D + ++W +I + Y + +
Sbjct: 3 SGSSGPMMPPVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTK-YK 61
Query: 429 VAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSS 465
A + L YEF V S S
Sbjct: 62 NANATTLSYLVTGLKPNTLYEFSVMVTKGRRSSTWSM 98
Score = 48.7 bits (116), Expect = 9e-07
Identities = 16/97 (16%), Positives = 26/97 (26%), Gaps = 5/97 (5%)
Query: 1980 SPYDKPS-PPGIPVVTQVGGDFVNLSWDKPLDDGGSRI---QGYWIDKHEVGSDAWQRVN 2035
S P PP + + D + ++W +I + Y + +
Sbjct: 3 SGSSGPMMPPVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTK-YK 61
Query: 2036 VAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSS 2072
A + L YEF V S S
Sbjct: 62 NANATTLSYLVTGLKPNTLYEFSVMVTKGRRSSTWSM 98
Score = 46.4 bits (110), Expect = 6e-06
Identities = 20/124 (16%), Positives = 33/124 (26%), Gaps = 36/124 (29%)
Query: 1002 PGAPGAPKGVDSTEDSISLVWSKP---RHDGGSPIQRYIVEKRLISDDKWIKASMAHIPD 1058
P + + D+I + W+ +H + + Y V + +
Sbjct: 9 MMPPVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANT---KYKNANA 65
Query: 1059 TSLKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGP 1118
T+L Y+ VT L N YEF V
Sbjct: 66 TTLSYL------------------------------VTGLKPNTLYEFSVMVTKGRRSST 95
Query: 1119 WSSS 1122
WS +
Sbjct: 96 WSMT 99
Score = 36.0 bits (83), Expect = 0.022
Identities = 14/61 (22%), Positives = 20/61 (32%), Gaps = 4/61 (6%)
Query: 22 YIIERREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPS---ICTT 78
Y + + A K + N S+ V L YEF ++ S S TT
Sbjct: 46 YTVRWKTNIPANT-KYKNANATTLSYLVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTT 104
Query: 79 P 79
Sbjct: 105 F 105
Score = 32.9 bits (75), Expect = 0.32
Identities = 12/47 (25%), Positives = 16/47 (34%), Gaps = 3/47 (6%)
Query: 1643 KCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPS---ICTTP 1686
K + N S+ V L YEF ++ S S TT
Sbjct: 59 KYKNANATTLSYLVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTTF 105
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus}
SCOP: b.1.1.1 b.1.1.3
Length = 176
Score = 62.7 bits (152), Expect = 5e-11
Identities = 22/171 (12%), Positives = 47/171 (27%), Gaps = 30/171 (17%)
Query: 508 PKPTISWLKGSREIT----------PSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVN 557
+ W +GS + S I L I ++ D+ Y +
Sbjct: 26 DIDEVRWERGSTLVAEFKRKMKPFLKSGAFEIL---ANGDLKIKNLTRDDSGTYNVTVYS 82
Query: 558 KGGVKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVI 617
G + L + + P + + N + ++ Y+ E +
Sbjct: 83 TNGTRILNKALDLRILEMVSKPMIYWE------CSNATLTCEVLEGTDVELKLYQGKEHL 136
Query: 618 ESGGHFHVETSERHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQISD 668
S T+ AP++ A N + +S + + +
Sbjct: 137 RSLRQ-----------KTMSYQWTNLRAPFKCKAVNRVSQESEMEVVNCPE 176
Score = 55.0 bits (132), Expect = 2e-08
Identities = 20/176 (11%), Positives = 46/176 (26%), Gaps = 27/176 (15%)
Query: 107 LLTLQCEATGTPVPKCRWLRNGREISS----------GARYRVETAGGVFRLHFNEVTDV 156
L + + + RW R ++ + + G L +T
Sbjct: 15 NLNIPNFQMTDDIDEVRWERGSTLVAEFKRKMKPFLKSGAFEILANG---DLKIKNLTRD 71
Query: 157 DNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVS 216
D+G Y Y++ G + + + + + E N + +E+
Sbjct: 72 DSGTYNVTVYSTNGTRILNKALDLRILEMV---SKPMIYWECSNATLTCEVLEGTDVELK 128
Query: 217 LTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTIN 272
L + ++S + + + N S +N
Sbjct: 129 LYQGKEHLRSLRQKTMSYQW-----------TNLRAPFKCKAVNRVSQESEMEVVN 173
Score = 47.6 bits (113), Expect = 7e-06
Identities = 24/186 (12%), Positives = 48/186 (25%), Gaps = 35/186 (18%)
Query: 1606 DTSLKYVLWVSEGKSIGSERGSTAQFLEREVGGAIWLKCNDYNVLE-CSFSVLNLVEGND 1664
+ V W + + FL+ + +L + NL +
Sbjct: 24 TDDIDEVRWERGSTLVAEFKRKMKPFLKSGA----------FEILANGDLKIKNLTRDDS 73
Query: 1665 YEFRIIAVNAIGKSEPSICTTPVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEATGT 1724
+ + + G + ++I E V KP + TL CE
Sbjct: 74 GTYNVTVYSTNGTRILNKALD-LRILEMV--SKPMIYWECSNA--------TLTCEVLEG 122
Query: 1725 PVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSR 1784
+ + + + S + + + C+A N V S
Sbjct: 123 TDVELKLYQGKEHLRSLR-----------QKTMSYQWTNLRAPFKCKAVNRVS--QESEM 169
Query: 1785 VKIGTP 1790
+ P
Sbjct: 170 EVVNCP 175
Score = 47.3 bits (112), Expect = 1e-05
Identities = 11/75 (14%), Positives = 20/75 (26%), Gaps = 13/75 (17%)
Query: 109 TLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNS 168
TL CE + + + + S + + + C+A N
Sbjct: 114 TLTCEVLEGTDVELKLYQGKEHLRSLR-----------QKTMSYQWTNLRAPFKCKAVNR 162
Query: 169 VGFAHTSSRVKIGTP 183
V S + P
Sbjct: 163 VS--QESEMEVVNCP 175
Score = 43.4 bits (102), Expect = 2e-04
Identities = 13/119 (10%), Positives = 34/119 (28%), Gaps = 22/119 (18%)
Query: 450 FRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPK 509
+ V + G + ++ ++ P I + NA C +
Sbjct: 76 YNVTVYSTNG---TRILNKALDLRILEMVSKPMIYW--------ECSNATLTCEVLEGTD 124
Query: 510 PTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAEL 568
+ +G + + ++ + + C+AVN+ +S +
Sbjct: 125 VELKLYQGKEHLRSLRQ-----------KTMSYQWTNLRAPFKCKAVNRVSQESEMEVV 172
Score = 43.4 bits (102), Expect = 2e-04
Identities = 13/119 (10%), Positives = 34/119 (28%), Gaps = 22/119 (18%)
Query: 2057 FRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPK 2116
+ V + G + ++ ++ P I + NA C +
Sbjct: 76 YNVTVYSTNG---TRILNKALDLRILEMVSKPMIYW--------ECSNATLTCEVLEGTD 124
Query: 2117 PTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAEL 2175
+ +G + + ++ + + C+AVN+ +S +
Sbjct: 125 VELKLYQGKEHLRSLRQ-----------KTMSYQWTNLRAPFKCKAVNRVSQESEMEVV 172
Score = 41.5 bits (97), Expect = 8e-04
Identities = 16/119 (13%), Positives = 32/119 (26%), Gaps = 9/119 (7%)
Query: 1146 MTVLAGEEFTITVPFSGRPKPTP--IWTVNGDEVS--PDGRIKFETSENQTIYRNKSAK- 1200
+ G + +P W V+ F S I N K
Sbjct: 6 VWGALGHGINLNIPNFQMTDDIDEVRWERGSTLVAEFKRKMKPFLKSGAFEILANGDLKI 65
Query: 1201 ---RATDSGSYTIQLVNTVGSDSASCKVYVVDKPSPPQGPLDVSDITPE-SCSLSWKPP 1255
DSG+Y + + +T G+ + + + + + +C +
Sbjct: 66 KNLTRDDSGTYNVTVYSTNGTRILNKALDLRILEMVSKPMIYWECSNATLTCEVLEGTD 124
Score = 40.3 bits (94), Expect = 0.002
Identities = 14/89 (15%), Positives = 32/89 (35%), Gaps = 3/89 (3%)
Query: 214 EVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINI 273
V+ K F +L + + IK + ++D+G Y V + +++G+ +++
Sbjct: 38 LVAEFKRKMKPFLKSG-AFEILANGDLK-IKNLTRDDSGTYNVTVYSTNGTRILNKALDL 95
Query: 274 TGLPGPPIGPLDVSEITKH-TCTLHWNPP 301
L + TC +
Sbjct: 96 RILEMVSKPMIYWECSNATLTCEVLEGTD 124
Score = 40.3 bits (94), Expect = 0.002
Identities = 14/89 (15%), Positives = 32/89 (35%), Gaps = 3/89 (3%)
Query: 1821 EVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINI 1880
V+ K F +L + + IK + ++D+G Y V + +++G+ +++
Sbjct: 38 LVAEFKRKMKPFLKSG-AFEILANGDLK-IKNLTRDDSGTYNVTVYSTNGTRILNKALDL 95
Query: 1881 TGLPGPPIGPLDVSEITKH-TCTLHWNPP 1908
L + TC +
Sbjct: 96 RILEMVSKPMIYWECSNATLTCEVLEGTD 124
Score = 39.9 bits (93), Expect = 0.003
Identities = 13/93 (13%), Positives = 28/93 (30%), Gaps = 9/93 (9%)
Query: 591 GENVVVKIPF--TGYPKPKITWYRDNEVIES--GGHFHVETSERHAI-----LTIRDASN 641
G + + IP ++ W R + ++ S I L I++ +
Sbjct: 11 GHGINLNIPNFQMTDDIDEVRWERGSTLVAEFKRKMKPFLKSGAFEILANGDLKIKNLTR 70
Query: 642 VDTAPYRVVAENDLGMDSAIVKIQISDRPDPPQ 674
D+ Y V + G + + +
Sbjct: 71 DDSGTYNVTVYSTNGTRILNKALDLRILEMVSK 103
Score = 38.4 bits (89), Expect = 0.009
Identities = 16/107 (14%), Positives = 32/107 (29%), Gaps = 8/107 (7%)
Query: 1432 ITVKAGEDFSIHVPFMAFPQPAA--FWFANDSII------DDSDTRVHKQLTMNSASLVV 1483
+ G ++++P W +++ + + + L +
Sbjct: 6 VWGALGHGINLNIPNFQMTDDIDEVRWERGSTLVAEFKRKMKPFLKSGAFEILANGDLKI 65
Query: 1484 KNSQRSDGGQYRLQLKNPAGFDTATLHSRLRTLPDSVNPRCHLPSST 1530
KN R D G Y + + + G LR L P + S
Sbjct: 66 KNLTRDDSGTYNVTVYSTNGTRILNKALDLRILEMVSKPMIYWECSN 112
Score = 37.2 bits (86), Expect = 0.021
Identities = 19/169 (11%), Positives = 38/169 (22%), Gaps = 27/169 (15%)
Query: 1058 DTSLKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYE----FRVCAVNA 1113
+ V W + + FL+ I I+N + + V +
Sbjct: 24 TDDIDEVRWERGSTLVAEFKRKMKPFLKSGAFEILANGDLKIKNLTRDDSGTYNVTVYST 83
Query: 1114 AGQGPWSSSSDIIMCCAPPCAPKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVN 1173
G + + D+ P I + S T+T
Sbjct: 84 NGTRILNKALDLR-ILEMVSKPMIYWECS----------NATLTCEVLEGTDVELKLYQG 132
Query: 1174 GDEVSPDGRIKFETSENQTIYRNKSAKRATDSGSYTIQLVNTVGSDSAS 1222
+ + + + + VN V +S
Sbjct: 133 KEHLRSLRQKTMSYQWT------------NLRAPFKCKAVNRVSQESEM 169
Score = 36.9 bits (85), Expect = 0.029
Identities = 12/82 (14%), Positives = 22/82 (26%), Gaps = 13/82 (15%)
Query: 2115 PKPTISWLKGSREIT----------PSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVN 2164
+ W +GS + S I L I ++ D+ Y +
Sbjct: 26 DIDEVRWERGSTLVAEFKRKMKPFLKSGAFEIL---ANGDLKIKNLTRDDSGTYNVTVYS 82
Query: 2165 KGGVKSTKAELIIMTAPKFNVP 2186
G + L + + P
Sbjct: 83 TNGTRILNKALDLRILEMVSKP 104
>2ede_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal
cancer suppressor, structural genomics, NPPSFA; NMR
{Homo sapiens}
Length = 114
Score = 60.9 bits (148), Expect = 5e-11
Identities = 26/96 (27%), Positives = 40/96 (41%), Gaps = 8/96 (8%)
Query: 274 TGLPGPPIGPLDVS----EITKHTCTLHWNPPKYDGGLKVTHYVVE-RRDISMPH--WIC 326
+G GP P D++ E + W PP G K+T Y++ D ++P WI
Sbjct: 3 SGSSGPTSAPKDLTVITREGKPRAVIVSWQPPLEANG-KITAYILFYTLDKNIPIDDWIM 61
Query: 327 ISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPP 362
+ + T + L Y F + A N G+GP
Sbjct: 62 ETISGDRLTHQIMDLNLDTMYYFRIQARNSKGVGPL 97
Score = 60.9 bits (148), Expect = 5e-11
Identities = 26/96 (27%), Positives = 40/96 (41%), Gaps = 8/96 (8%)
Query: 1881 TGLPGPPIGPLDVS----EITKHTCTLHWNPPKYDGGLKVTHYVVE-RRDISMPH--WIC 1933
+G GP P D++ E + W PP G K+T Y++ D ++P WI
Sbjct: 3 SGSSGPTSAPKDLTVITREGKPRAVIVSWQPPLEANG-KITAYILFYTLDKNIPIDDWIM 61
Query: 1934 ISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPP 1969
+ + T + L Y F + A N G+GP
Sbjct: 62 ETISGDRLTHQIMDLNLDTMYYFRIQARNSKGVGPL 97
Score = 60.9 bits (148), Expect = 5e-11
Identities = 25/103 (24%), Positives = 37/103 (35%), Gaps = 11/103 (10%)
Query: 670 PDPPQFPTVEDI--GHDSLALVWRAPIWDGGSNITNYIVE---KREHPMSSWIRV---GN 721
P+ TV ++ + W+ P+ G IT YI+ + P+ WI G+
Sbjct: 9 TSAPKDLTVITREGKPRAVIVSWQPPLEANG-KITAYILFYTLDKNIPIDDWIMETISGD 67
Query: 722 TRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKD 764
I L+ Y FR+ A N G S T K
Sbjct: 68 RLTHQ--IMDLNLDTMYYFRIQARNSKGVGPLSDPILFRTLKV 108
Score = 57.8 bits (140), Expect = 6e-10
Identities = 21/90 (23%), Positives = 35/90 (38%), Gaps = 5/90 (5%)
Query: 1231 PSPPQGP-LDVSDITPESCSLSWKPPLDDGGSPITNYVVEKYESATGFWSKLSSFVRSPA 1289
S P+ + + P + +SW+PPL+ G IT Y++ S
Sbjct: 9 TSAPKDLTVITREGKPRAVIVSWQPPLEANG-KITAYILFYTLDKNIPIDDWIMETISGD 67
Query: 1290 ---YDVFGLETNRQYRFRVRAENQYGVSEP 1316
+ + L + Y FR++A N GV
Sbjct: 68 RLTHQIMDLNLDTMYYFRIQARNSKGVGPL 97
Score = 57.4 bits (139), Expect = 8e-10
Identities = 19/90 (21%), Positives = 37/90 (41%), Gaps = 6/90 (6%)
Query: 902 PHPPENL--HADEFAGDSLTLYWTPPRDNGGSEITNYVVE---KKDYNSTVWTKVSSYVT 956
P++L E ++ + W PP + G +IT Y++ K+ W +
Sbjct: 9 TSAPKDLTVITREGKPRAVIVSWQPPLEANG-KITAYILFYTLDKNIPIDDWIMETISGD 67
Query: 957 TPFVRVRNLAIGSTYEFRVMAENQYGLSKP 986
++ +L + + Y FR+ A N G+
Sbjct: 68 RLTHQIMDLNLDTMYYFRIQARNSKGVGPL 97
Score = 55.5 bits (134), Expect = 4e-09
Identities = 22/123 (17%), Positives = 33/123 (26%), Gaps = 33/123 (26%)
Query: 1002 PGAPGAPK--GVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDT 1059
AP + ++ + W P G I YI+ L + M I
Sbjct: 9 TSAPKDLTVITREGKPRAVIVSWQPPLEANG-KITAYILFYTLDKNIPIDDWIMETISGD 67
Query: 1060 SLKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPW 1119
L + + L + Y FR+ A N+ G GP
Sbjct: 68 RLTHQ------------------------------IMDLNLDTMYYFRIQARNSKGVGPL 97
Query: 1120 SSS 1122
S
Sbjct: 98 SDP 100
Score = 54.7 bits (132), Expect = 7e-09
Identities = 23/101 (22%), Positives = 36/101 (35%), Gaps = 10/101 (9%)
Query: 378 PSPPGIPVVTQVGG--DFVNLSWDKPLDDGGSRIQGYWI---DKHEVGSDAWQRVNVAIC 432
S P V G V +SW PL+ G +I Y + + D W ++
Sbjct: 9 TSAPKDLTVITREGKPRAVIVSWQPPLEANG-KITAYILFYTLDKNIPIDDWIMETISG- 66
Query: 433 APSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIK 473
I +L Y FR+ A+N G S+ + +
Sbjct: 67 DRLTHQIMDLNLDTMYYFRIQARNSKG---VGPLSDPILFR 104
Score = 54.7 bits (132), Expect = 7e-09
Identities = 23/101 (22%), Positives = 36/101 (35%), Gaps = 10/101 (9%)
Query: 1985 PSPPGIPVVTQVGG--DFVNLSWDKPLDDGGSRIQGYWI---DKHEVGSDAWQRVNVAIC 2039
S P V G V +SW PL+ G +I Y + + D W ++
Sbjct: 9 TSAPKDLTVITREGKPRAVIVSWQPPLEANG-KITAYILFYTLDKNIPIDDWIMETISG- 66
Query: 2040 APSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIK 2080
I +L Y FR+ A+N G S+ + +
Sbjct: 67 DRLTHQIMDLNLDTMYYFRIQARNSKG---VGPLSDPILFR 104
Score = 41.2 bits (97), Expect = 4e-04
Identities = 23/137 (16%), Positives = 36/137 (26%), Gaps = 47/137 (34%)
Query: 1553 SLTSKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYV 1612
LT + ++ + W P G I YI+ L + M I L
Sbjct: 14 DLTVITREGKPRAVIVSWQPPLEANG-KITAYILFYTLDKNIPIDDWIMETISGDRL--- 69
Query: 1613 LWVSEGKSIGSERGSTAQFLEREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAV 1672
+ +++L Y FRI A
Sbjct: 70 ----------------------------------------THQIMDLNLDTMYYFRIQAR 89
Query: 1673 NAIG---KSEPSICTTP 1686
N+ G S+P + T
Sbjct: 90 NSKGVGPLSDPILFRTL 106
Score = 33.9 bits (78), Expect = 0.12
Identities = 11/39 (28%), Positives = 18/39 (46%), Gaps = 3/39 (7%)
Query: 44 ECSFSVLNLVEGNDYEFRIIAVNAIG---KSEPSICTTP 79
+ +++L Y FRI A N+ G S+P + T
Sbjct: 68 RLTHQIMDLNLDTMYYFRIQARNSKGVGPLSDPILFRTL 106
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse;
HET: NAG BMA MAN; 3.25A {Homo sapiens}
Length = 440
Score = 65.9 bits (161), Expect = 6e-11
Identities = 31/102 (30%), Positives = 43/102 (42%), Gaps = 9/102 (8%)
Query: 89 EKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLR-NGREI---SSGARYRVETAGG 144
P + P DL V G L+C A+ + W+ NG + + R V + G
Sbjct: 340 YAPVIVEPPADLNVTEGMAAELKCRAST-SLTSVSWITPNGTVMTHGAYKVRIAVLSDG- 397
Query: 145 VFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKI-GTPPR 185
L+F VT D G YTC NSVG S+ + + GT
Sbjct: 398 --TLNFTNVTVQDTGMYTCMVSNSVGNTTASATLNVTGTHHH 437
Score = 65.9 bits (161), Expect = 6e-11
Identities = 31/102 (30%), Positives = 43/102 (42%), Gaps = 9/102 (8%)
Query: 1696 EKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLR-NGREI---SSGARYRVETAGG 1751
P + P DL V G L+C A+ + W+ NG + + R V + G
Sbjct: 340 YAPVIVEPPADLNVTEGMAAELKCRAST-SLTSVSWITPNGTVMTHGAYKVRIAVLSDG- 397
Query: 1752 VFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKI-GTPPR 1792
L+F VT D G YTC NSVG S+ + + GT
Sbjct: 398 --TLNFTNVTVQDTGMYTCMVSNSVGNTTASATLNVTGTHHH 437
Score = 63.6 bits (155), Expect = 4e-10
Identities = 20/98 (20%), Positives = 37/98 (37%), Gaps = 8/98 (8%)
Query: 481 PEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREI----TPSARHHIFAEGDTY 536
P I+ P + N + A+ +C + ++SW+ + + R + ++G
Sbjct: 342 PVIVEPPADLNVTEGMAAELKCRAST-SLTSVSWITPNGTVMTHGAYKVRIAVLSDG--- 397
Query: 537 TLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAP 574
TL +V D Y C N G + A L +
Sbjct: 398 TLNFTNVTVQDTGMYTCMVSNSVGNTTASATLNVTGTH 435
Score = 63.6 bits (155), Expect = 4e-10
Identities = 20/98 (20%), Positives = 37/98 (37%), Gaps = 8/98 (8%)
Query: 2088 PEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREI----TPSARHHIFAEGDTY 2143
P I+ P + N + A+ +C + ++SW+ + + R + ++G
Sbjct: 342 PVIVEPPADLNVTEGMAAELKCRAST-SLTSVSWITPNGTVMTHGAYKVRIAVLSDG--- 397
Query: 2144 TLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAP 2181
TL +V D Y C N G + A L +
Sbjct: 398 TLNFTNVTVQDTGMYTCMVSNSVGNTTASATLNVTGTH 435
Score = 56.7 bits (137), Expect = 5e-08
Identities = 42/194 (21%), Positives = 67/194 (34%), Gaps = 40/194 (20%)
Query: 99 DLVVPLGKLLTL-------QCEATGTPVPKCR--WLRN-GREISSGARYRVETAGGVFRL 148
DL PL L + C C WL ++++ L
Sbjct: 273 DLFTPLHHLERIHLHHNPWNCN--------CDILWLSWWIKDMAPSNTACCARCNTPPNL 324
Query: 149 HFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYA 208
+ ++D +TC P I P L + EG ++K A
Sbjct: 325 KGRYIGELDQNYFTCY------------------APVIVEPPADLNVTEGMAAELKC-RA 365
Query: 209 GDQPMEVS-LTKNGRVVQSD-DRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVS 266
VS +T NG V+ + + VL D + + +D G YT +SNS G+ +
Sbjct: 366 STSLTSVSWITPNGTVMTHGAYKVRIAVLSDGTLN-FTNVTVQDTGMYTCMVSNSVGNTT 424
Query: 267 GTFTINITGLPGPP 280
+ T+N+TG
Sbjct: 425 ASATLNVTGTHHHH 438
Score = 56.7 bits (137), Expect = 5e-08
Identities = 42/194 (21%), Positives = 67/194 (34%), Gaps = 40/194 (20%)
Query: 1706 DLVVPLGKLLTL-------QCEATGTPVPKCR--WLRN-GREISSGARYRVETAGGVFRL 1755
DL PL L + C C WL ++++ L
Sbjct: 273 DLFTPLHHLERIHLHHNPWNCN--------CDILWLSWWIKDMAPSNTACCARCNTPPNL 324
Query: 1756 HFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYA 1815
+ ++D +TC P I P L + EG ++K A
Sbjct: 325 KGRYIGELDQNYFTCY------------------APVIVEPPADLNVTEGMAAELKC-RA 365
Query: 1816 GDQPMEVS-LTKNGRVVQSD-DRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVS 1873
VS +T NG V+ + + VL D + + +D G YT +SNS G+ +
Sbjct: 366 STSLTSVSWITPNGTVMTHGAYKVRIAVLSDGTLN-FTNVTVQDTGMYTCMVSNSVGNTT 424
Query: 1874 GTFTINITGLPGPP 1887
+ T+N+TG
Sbjct: 425 ASATLNVTGTHHHH 438
Score = 50.1 bits (120), Expect = 5e-06
Identities = 17/106 (16%), Positives = 34/106 (32%), Gaps = 7/106 (6%)
Query: 572 TAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSERH 631
AP PP +G +K + ++W N + + G + V +
Sbjct: 340 YAPVIVEPPA---DLNVTEGMAAELKCRAST-SLTSVSWITPNGTVMTHGAYKVRIAVLS 395
Query: 632 A-ILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQISDRPDPPQFP 676
L + + DT Y + N +G +A + ++
Sbjct: 396 DGTLNFTNVTVQDTGMYTCMVSNSVGNTTASATLNVT--GTHHHHH 439
Score = 45.9 bits (109), Expect = 1e-04
Identities = 23/109 (21%), Positives = 41/109 (37%), Gaps = 12/109 (11%)
Query: 1129 CAPPCAPKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIW-TVNGDEVSPDG-RIKFE 1186
C P + +DL V G + S + W T NG ++ +++
Sbjct: 339 CYAPVIVEPPADL-----NVTEGMAAELKCRAST-SLTSVSWITPNGTVMTHGAYKVRIA 392
Query: 1187 TSENQTIY-RNKSAKRATDSGSYTIQLVNTVGSDSASCKVYVVDKPSPP 1234
+ T+ N + D+G YT + N+VG+ +AS + V
Sbjct: 393 VLSDGTLNFTNVTV---QDTGMYTCMVSNSVGNTTASATLNVTGTHHHH 438
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain,
kinase and RNAse function, ATP binding ssRNA
dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo
sapiens}
Length = 432
Score = 65.9 bits (161), Expect = 7e-11
Identities = 14/77 (18%), Positives = 26/77 (33%), Gaps = 5/77 (6%)
Query: 822 YDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQL-HHPKLI 880
+ + +G GA G + R A K I +E+ ++ + HP +I
Sbjct: 26 FCPKDVLGHGAEGTI-VYRGMFDNRDVAVKRILPECF---SFADREVQLLRESDEHPNVI 81
Query: 881 NLHDAFEDDDEMVLIFE 897
+D + E
Sbjct: 82 RYFCTEKDRQFQYIAIE 98
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding;
HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A*
3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A*
Length = 351
Score = 65.3 bits (160), Expect = 8e-11
Identities = 30/110 (27%), Positives = 46/110 (41%), Gaps = 17/110 (15%)
Query: 804 SKYVPQPVDIKTSSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKE- 862
+K V Y+ L +IG G FG V + R RKTG A K + + + EKE
Sbjct: 2 AKQYDSVECPFCDEV-SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMEN--EKEG 58
Query: 863 ----LIRKEIDIMNQLHHPKLINLHD--------AFEDDDEMVLIFEVLD 900
+R EI I+ L H ++NL + + L+F+ +
Sbjct: 59 FPITALR-EIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCE 107
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET:
YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A*
2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A*
2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A*
2x8i_A* 2xey_A* 2xez_A* ...
Length = 276
Score = 64.1 bits (157), Expect = 8e-11
Identities = 20/79 (25%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Query: 820 DHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLE-KELIRKEIDIMNQLHHPK 878
+ +D+++ +G GA+G V R T A K + + ++ E I+KEI I L+H
Sbjct: 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 66
Query: 879 LINLHDAFEDDDEMVLIFE 897
++ + + + L E
Sbjct: 67 VVKFYGHRREGNIQYLFLE 85
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase,
inhibitor, transf transferase inhibitor complex; HET:
0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A*
2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A*
2h9v_A*
Length = 410
Score = 65.5 bits (160), Expect = 8e-11
Identities = 26/106 (24%), Positives = 53/106 (50%), Gaps = 4/106 (3%)
Query: 796 DQYVFDIYSKYVPQPVDIKTSSV-YDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIP 854
++ + + S+Y I+ + + Y++++ IG GAFG V R + T ++A K +
Sbjct: 44 NKNIDNFLSRYKDTINKIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLS 103
Query: 855 VSHNLEK---ELIRKEIDIMNQLHHPKLINLHDAFEDDDEMVLIFE 897
+++ +E DIM + P ++ L AF+DD + ++ E
Sbjct: 104 KFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVME 149
>3s35_X Vascular endothelial growth factor receptor 2; antibody, KDR, VEGF
receptor, cancer, immune system-transfer complex; HET:
NAG; 2.20A {Homo sapiens} PDB: 3s36_X 3s37_X
Length = 122
Score = 60.1 bits (145), Expect = 1e-10
Identities = 20/103 (19%), Positives = 34/103 (33%), Gaps = 10/103 (9%)
Query: 94 IVPLKDLVVPLGKLLTLQCEATGTPVPKC--RWLRNGREISSGARYRV--------ETAG 143
+ P + + +G+ L L C A W + E
Sbjct: 12 LSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKK 71
Query: 144 GVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRI 186
+ L + VT D G YTC A + + S+ V++ P +
Sbjct: 72 FLSTLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRVHEKPFV 114
Score = 60.1 bits (145), Expect = 1e-10
Identities = 20/103 (19%), Positives = 34/103 (33%), Gaps = 10/103 (9%)
Query: 1701 IVPLKDLVVPLGKLLTLQCEATGTPVPKC--RWLRNGREISSGARYRV--------ETAG 1750
+ P + + +G+ L L C A W + E
Sbjct: 12 LSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKK 71
Query: 1751 GVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRI 1793
+ L + VT D G YTC A + + S+ V++ P +
Sbjct: 72 FLSTLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRVHEKPFV 114
Score = 57.1 bits (137), Expect = 1e-09
Identities = 15/108 (13%), Positives = 23/108 (21%), Gaps = 10/108 (9%)
Query: 484 IVPLRNANAIQNHNAQFQCTITGCPKPTISW----------LKGSREITPSARHHIFAEG 533
+ P CT I + K + +
Sbjct: 12 LSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKK 71
Query: 534 DTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPR 581
TL I+ V D Y C A + K + + P
Sbjct: 72 FLSTLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRVHEKPFVAFGSG 119
Score = 57.1 bits (137), Expect = 1e-09
Identities = 15/108 (13%), Positives = 23/108 (21%), Gaps = 10/108 (9%)
Query: 2091 IVPLRNANAIQNHNAQFQCTITGCPKPTISW----------LKGSREITPSARHHIFAEG 2140
+ P CT I + K + +
Sbjct: 12 LSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKK 71
Query: 2141 DTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPR 2188
TL I+ V D Y C A + K + + P
Sbjct: 72 FLSTLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRVHEKPFVAFGSG 119
Score = 48.2 bits (114), Expect = 2e-06
Identities = 13/97 (13%), Positives = 25/97 (25%), Gaps = 9/97 (9%)
Query: 1144 RDMTVLAGEEFTITVPFSGRPKPTP--IWTVNGDEVSPDGRIKFETSENQTIYRNKSAK- 1200
+ + GE+ + W + + + K
Sbjct: 16 HGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLST 75
Query: 1201 ------RATDSGSYTIQLVNTVGSDSASCKVYVVDKP 1231
+D G YT + + + S V V +KP
Sbjct: 76 LTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRVHEKP 112
Score = 47.0 bits (111), Expect = 5e-06
Identities = 13/91 (14%), Positives = 27/91 (29%), Gaps = 10/91 (10%)
Query: 590 KGENVVVKIPFTGYPKPKITWYRDNE----------VIESGGHFHVETSERHAILTIRDA 639
GE +V+ I + + + E + + LTI
Sbjct: 22 VGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGV 81
Query: 640 SNVDTAPYRVVAENDLGMDSAIVKIQISDRP 670
+ D Y A + L +++ ++P
Sbjct: 82 TRSDQGLYTCAASSGLMTKKNSTFVRVHEKP 112
Score = 38.2 bits (88), Expect = 0.005
Identities = 11/90 (12%), Positives = 24/90 (26%), Gaps = 9/90 (10%)
Query: 1430 RDITVKAGEDFSIHVPFMAFPQPAAFW---------FANDSIIDDSDTRVHKQLTMNSAS 1480
I + GE ++ + + D T+ ++ ++
Sbjct: 16 HGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLST 75
Query: 1481 LVVKNSQRSDGGQYRLQLKNPAGFDTATLH 1510
L + RSD G Y + +
Sbjct: 76 LTIDGVTRSDQGLYTCAASSGLMTKKNSTF 105
Score = 35.1 bits (80), Expect = 0.055
Identities = 11/71 (15%), Positives = 21/71 (29%), Gaps = 4/71 (5%)
Query: 207 YAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVS 266
Y + L QS + + I + + D G YT S+ +
Sbjct: 46 YPSSKHQHKKLVNRDLKTQSGSE----MKKFLSTLTIDGVTRSDQGLYTCAASSGLMTKK 101
Query: 267 GTFTINITGLP 277
+ + + P
Sbjct: 102 NSTFVRVHEKP 112
Score = 35.1 bits (80), Expect = 0.055
Identities = 11/71 (15%), Positives = 21/71 (29%), Gaps = 4/71 (5%)
Query: 1814 YAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVS 1873
Y + L QS + + I + + D G YT S+ +
Sbjct: 46 YPSSKHQHKKLVNRDLKTQSGSE----MKKFLSTLTIDGVTRSDQGLYTCAASSGLMTKK 101
Query: 1874 GTFTINITGLP 1884
+ + + P
Sbjct: 102 NSTFVRVHEKP 112
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1,
peptide drug, prostate cancer, transferase; HET: ANP;
1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A*
3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A*
2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A*
3cxw_A* 3cy3_A* 2bik_B* ...
Length = 320
Score = 64.7 bits (158), Expect = 1e-10
Identities = 19/92 (20%), Positives = 34/92 (36%), Gaps = 8/92 (8%)
Query: 814 KTSSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEK------ELIRKE 867
+ + Y + +G+G FG V+ A K + + + E
Sbjct: 37 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 96
Query: 868 IDIMNQLHH--PKLINLHDAFEDDDEMVLIFE 897
+ ++ ++ +I L D FE D VLI E
Sbjct: 97 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILE 128
>2b5i_C Cytokine receptor common gamma chain; four-helix bundle,
fibronectin domain, cytokine-cytokine REC complex; HET:
NAG; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB:
3bpl_C* 3qb7_C* 3qaz_C*
Length = 199
Score = 62.1 bits (150), Expect = 1e-10
Identities = 21/187 (11%), Positives = 54/187 (28%), Gaps = 16/187 (8%)
Query: 293 TCTLHWNPPKYDGGLKVTHYVVERRDISMPHWIC---ISTTCHDTTFIVQGLTEGQEYLF 349
CT W +T + + + C + + + +Q F
Sbjct: 16 NCT--WQSSSEPQPTNLTLHYWYKNSDNDKVQKCSHYLFSEEITSGCQLQKKEIHLYQTF 73
Query: 350 HVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRI 409
V + + + P P + ++ + L+W+ +
Sbjct: 74 VVQLQDPREPRRQATQMLKL---QNLVIPWAPENLTLHKLSESQLELNWNNRF---LNHC 127
Query: 410 QGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLS---LPSSA 466
+ + +W +V + ++P++ ++Y FRV ++ S
Sbjct: 128 LEHLVQYRTDWDHSWTEQSVDY--RHKFSLPSVDGQKRYTFRVRSRFNPLCGSAQHWSEW 185
Query: 467 SNSVQIK 473
S+ +
Sbjct: 186 SHPIHWG 192
Score = 62.1 bits (150), Expect = 1e-10
Identities = 21/187 (11%), Positives = 54/187 (28%), Gaps = 16/187 (8%)
Query: 1900 TCTLHWNPPKYDGGLKVTHYVVERRDISMPHWIC---ISTTCHDTTFIVQGLTEGQEYLF 1956
CT W +T + + + C + + + +Q F
Sbjct: 16 NCT--WQSSSEPQPTNLTLHYWYKNSDNDKVQKCSHYLFSEEITSGCQLQKKEIHLYQTF 73
Query: 1957 HVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRI 2016
V + + + P P + ++ + L+W+ +
Sbjct: 74 VVQLQDPREPRRQATQMLKL---QNLVIPWAPENLTLHKLSESQLELNWNNRF---LNHC 127
Query: 2017 QGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLS---LPSSA 2073
+ + +W +V + ++P++ ++Y FRV ++ S
Sbjct: 128 LEHLVQYRTDWDHSWTEQSVDY--RHKFSLPSVDGQKRYTFRVRSRFNPLCGSAQHWSEW 185
Query: 2074 SNSVQIK 2080
S+ +
Sbjct: 186 SHPIHWG 192
Score = 58.6 bits (141), Expect = 2e-09
Identities = 18/127 (14%), Positives = 41/127 (32%), Gaps = 6/127 (4%)
Query: 635 TIRDASNVDTAPYRVVAENDLGM---DSAIVKIQISDRPDPPQFPTVEDIGHDSLALVWR 691
++ + V ++ + ++K+Q P P+ T+ + L L W
Sbjct: 61 QLQKKEIHLYQTFVVQLQDPREPRRQATQMLKLQNLVIPWAPENLTLHKLSESQLELNWN 120
Query: 692 APIWDGGSNITNYIVEKREHPMSSWIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRS 751
++ ++V+ R SW ++ + +Y FRV +
Sbjct: 121 NRFL---NHCLEHLVQYRTDWDHSWTEQSVDYRHKFSLPSVDGQKRYTFRVRSRFNPLCG 177
Query: 752 DPSTTSD 758
S+
Sbjct: 178 SAQHWSE 184
Score = 53.6 bits (128), Expect = 9e-08
Identities = 15/103 (14%), Positives = 40/103 (38%), Gaps = 8/103 (7%)
Query: 1208 YTIQLVNTVGSDSASCKVYVVD---KPSPPQGPLDVSDITPESCSLSWKPPLDDGGSPIT 1264
+ +QL + + ++ + P P+ L + ++ L+W +
Sbjct: 73 FVVQLQDPREPRRQATQMLKLQNLVIPWAPEN-LTLHKLSESQLELNWNNRF---LNHCL 128
Query: 1265 NYVVEKYESATGFWSKLSSFVRSPAYDVFGLETNRQYRFRVRA 1307
++V+ W++ S + + ++ ++Y FRVR+
Sbjct: 129 EHLVQYRTDWDHSWTEQSV-DYRHKFSLPSVDGQKRYTFRVRS 170
Score = 49.7 bits (118), Expect = 2e-06
Identities = 17/75 (22%), Positives = 28/75 (37%), Gaps = 4/75 (5%)
Query: 901 RPHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTKVSSYVTTPFV 960
P PENL + + L L W + ++V+ + WT+ S F
Sbjct: 98 IPWAPENLTLHKLSESQLELNWNNRF---LNHCLEHLVQYRTDWDHSWTEQSVDYRHKFS 154
Query: 961 RVRNLAIGSTYEFRV 975
+ ++ Y FRV
Sbjct: 155 -LPSVDGQKRYTFRV 168
Score = 32.0 bits (72), Expect = 1.6
Identities = 15/153 (9%), Positives = 40/153 (26%), Gaps = 17/153 (11%)
Query: 1246 ESCSLSWKPPLDDGGSPITNYVVEKYESATGFWSKLSSFVRSPAYDVFG-----LETNRQ 1300
E + +W+ + P + Y+++ + S G E +
Sbjct: 13 EYMNCTWQSSSE--PQPTNLTLHYWYKNSDNDKVQKCSHYLFSEEITSGCQLQKKEIHLY 70
Query: 1301 YRFRVRAENQYGVSEPLELDNSITAKFPFTVPDPPGQPQIVDWDTNNATLMWDRPRTDGG 1360
F V+ ++ + +P P + + L W+
Sbjct: 71 QTFVVQLQDPREPRRQATQMLKLQ---NLVIPWAPENLTLHKLSESQLELNWNNRFL--- 124
Query: 1361 SKIQGYKMLLKTPTGELPTTIWSKIRPTSSTVY 1393
+ + + +T W++ +
Sbjct: 125 NHCLEHLVQYRTDWD----HSWTEQSVDYRHKF 153
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase,
ATP-BI nucleotide-binding, cardiac contractility, muscle
different; HET: BI8; 2.80A {Homo sapiens}
Length = 412
Score = 64.7 bits (158), Expect = 1e-10
Identities = 31/106 (29%), Positives = 54/106 (50%), Gaps = 4/106 (3%)
Query: 796 DQYVFDIYSKYVPQPVDIKTSSV-YDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIP 854
D+YV D P V +K + D ++IL+ IG GAF V + ++TG ++A K +
Sbjct: 36 DKYVADFLQWAEPIVVRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMN 95
Query: 855 VSHNLEK---ELIRKEIDIMNQLHHPKLINLHDAFEDDDEMVLIFE 897
L++ R+E D++ + LH AF+D++ + L+ E
Sbjct: 96 KWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVME 141
>1eer_B Epobp, erythropoietin receptor; signal transduction, hematopoietic
cytokine, cytokine receptor class 1, complex
(cytokine/receptor); 1.90A {Homo sapiens} SCOP: b.1.2.1
b.1.2.1 PDB: 1cn4_A 2jix_B 1eba_A* 1ern_A 1ebp_A
Length = 227
Score = 62.8 bits (152), Expect = 1e-10
Identities = 33/211 (15%), Positives = 54/211 (25%), Gaps = 22/211 (10%)
Query: 279 PPIGPLDVSEITK--HTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHDTT- 335
GP ++ T+ W G+ Y + P +C
Sbjct: 20 AARGPEELLCFTERLEDLVCFWEEAA-SAGVGPGQYSFSYQLEDEPWKLCRLHQAPTARG 78
Query: 336 -------FIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQ 388
+ V A + + IN + P V
Sbjct: 79 AVRFWCSLPTADTSSFVPLELRVTAASGAPRYHRVIHINEV------VLLDAPVGLVARL 132
Query: 389 VG-GDFVNLSWDKPLDDGGSRIQGYWI-DKHEVGSDAWQRVNVAICAPSQINIPNLIEGR 446
V L W P + + Y + G+ + QRV + + NL
Sbjct: 133 ADESGHVVLRWLPPPETPMTSHIRYEVDVSAGQGAGSVQRVEILEGRTE-CVLSNLRGRT 191
Query: 447 QYEFRVYAQ--NEAGLSLPSSASNSVQIKDP 475
+Y F V A+ + S S V + P
Sbjct: 192 RYTFAVRARMAEPSFGGFWSEWSEPVSLLTP 222
Score = 62.8 bits (152), Expect = 1e-10
Identities = 33/211 (15%), Positives = 54/211 (25%), Gaps = 22/211 (10%)
Query: 1886 PPIGPLDVSEITK--HTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHDTT- 1942
GP ++ T+ W G+ Y + P +C
Sbjct: 20 AARGPEELLCFTERLEDLVCFWEEAA-SAGVGPGQYSFSYQLEDEPWKLCRLHQAPTARG 78
Query: 1943 -------FIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQ 1995
+ V A + + IN + P V
Sbjct: 79 AVRFWCSLPTADTSSFVPLELRVTAASGAPRYHRVIHINEV------VLLDAPVGLVARL 132
Query: 1996 VG-GDFVNLSWDKPLDDGGSRIQGYWI-DKHEVGSDAWQRVNVAICAPSQINIPNLIEGR 2053
V L W P + + Y + G+ + QRV + + NL
Sbjct: 133 ADESGHVVLRWLPPPETPMTSHIRYEVDVSAGQGAGSVQRVEILEGRTE-CVLSNLRGRT 191
Query: 2054 QYEFRVYAQ--NEAGLSLPSSASNSVQIKDP 2082
+Y F V A+ + S S V + P
Sbjct: 192 RYTFAVRARMAEPSFGGFWSEWSEPVSLLTP 222
Score = 60.9 bits (147), Expect = 5e-10
Identities = 34/243 (13%), Positives = 54/243 (22%), Gaps = 54/243 (22%)
Query: 897 EVLDRPHPPENLH--ADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTKVSSY 954
L PE L + L +W G Y + +
Sbjct: 16 AALLAARGPEELLCFTERLE--DLVCFWEEAASAGVG-PGQYSFSYQLEDEPWKLCRLHQ 72
Query: 955 VTTPFVRVRN--------LAIGSTYEFRVMAENQYGLSKPALTI-DPIKAKHPFDVPGAP 1005
T VR + E RV A + + I + + P +
Sbjct: 73 APTARGAVRFWCSLPTADTSSFVPLELRVTAASGAPRYHRVIHINEVVLLDAPVGLVARL 132
Query: 1006 GAPKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVL 1065
+ L W P + RY V+ ++ T
Sbjct: 133 A------DESGHVVLRWLPPPETPMTSHIRYEVDVSAGQGAGSVQRVEILEGRTECV--- 183
Query: 1066 WVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAA--GQGPWSSSS 1123
+++L Y F V A A G WS S
Sbjct: 184 -----------------------------LSNLRGRTRYTFAVRARMAEPSFGGFWSEWS 214
Query: 1124 DII 1126
+ +
Sbjct: 215 EPV 217
Score = 55.9 bits (134), Expect = 3e-08
Identities = 17/98 (17%), Positives = 26/98 (26%), Gaps = 1/98 (1%)
Query: 255 TVNLSNSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVV 314
V ++ + IN L P+G + L W PP Y V
Sbjct: 100 RVTAASGAPRYHRVIHINEVVLLDAPVGLVARLADESGHVVLRWLPPPETPMTSHIRYEV 159
Query: 315 E-RRDISMPHWICISTTCHDTTFIVQGLTEGQEYLFHV 351
+ + T ++ L Y F V
Sbjct: 160 DVSAGQGAGSVQRVEILEGRTECVLSNLRGRTRYTFAV 197
Score = 55.9 bits (134), Expect = 3e-08
Identities = 17/98 (17%), Positives = 26/98 (26%), Gaps = 1/98 (1%)
Query: 1862 TVNLSNSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVV 1921
V ++ + IN L P+G + L W PP Y V
Sbjct: 100 RVTAASGAPRYHRVIHINEVVLLDAPVGLVARLADESGHVVLRWLPPPETPMTSHIRYEV 159
Query: 1922 E-RRDISMPHWICISTTCHDTTFIVQGLTEGQEYLFHV 1958
+ + T ++ L Y F V
Sbjct: 160 DVSAGQGAGSVQRVEILEGRTECVLSNLRGRTRYTFAV 197
Score = 54.3 bits (130), Expect = 9e-08
Identities = 16/103 (15%), Positives = 32/103 (31%), Gaps = 3/103 (2%)
Query: 1208 YTIQLVNTVGSDSASCKVYVVD--KPSPPQGPLDVSDITPESCSLSWKPPLDDGGSPITN 1265
+++ G+ +++ + P G + L W PP + +
Sbjct: 97 LELRVTAASGAPRYHRVIHINEVVLLDAPVGLVARLADESGHVVLRWLPPPETPMTSHIR 156
Query: 1266 YVVE-KYESATGFWSKLSSFVRSPAYDVFGLETNRQYRFRVRA 1307
Y V+ G ++ + L +Y F VRA
Sbjct: 157 YEVDVSAGQGAGSVQRVEILEGRTECVLSNLRGRTRYTFAVRA 199
Score = 48.2 bits (114), Expect = 1e-05
Identities = 22/114 (19%), Positives = 34/114 (29%), Gaps = 4/114 (3%)
Query: 648 RVVAENDLGMDSAIVKIQISDRPDPPQFPTVEDIG-HDSLALVWRAPIWDGGSNITNYIV 706
RV A + ++ I D P + L W P ++ Y V
Sbjct: 100 RVTAASGAPRYHRVIHINEVVLLDAPVGLVARLADESGHVVLRWLPPPETPMTSHIRYEV 159
Query: 707 E-KREHPMSSWIRVGNT-RFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSD 758
+ S RV T ++ L +Y F V A + S S+
Sbjct: 160 DVSAGQGAGSVQRVEILEGRTECVLSNLRGRTRYTFAVRA-RMAEPSFGGFWSE 212
Score = 43.5 bits (102), Expect = 3e-04
Identities = 16/88 (18%), Positives = 25/88 (28%), Gaps = 2/88 (2%)
Query: 890 DEMVLIFEVLDRPHPPENLHA-DEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNST-V 947
V+ + P L A + L W PP + + Y V+
Sbjct: 110 YHRVIHINEVVLLDAPVGLVARLADESGHVVLRWLPPPETPMTSHIRYEVDVSAGQGAGS 169
Query: 948 WTKVSSYVTTPFVRVRNLAIGSTYEFRV 975
+V + NL + Y F V
Sbjct: 170 VQRVEILEGRTECVLSNLRGRTRYTFAV 197
Score = 35.5 bits (81), Expect = 0.12
Identities = 21/185 (11%), Positives = 45/185 (24%), Gaps = 17/185 (9%)
Query: 1220 SASCKVYVVDKPSPPQGPLDVSDITP--ESCSLSWKPPLDDGGSPIT---NYVVEKYESA 1274
+ K +GP ++ T E W+ G P +Y +E
Sbjct: 7 NPDPKFESKAALLAARGPEELLCFTERLEDLVCFWEEAASAGVGPGQYSFSYQLEDEPWK 66
Query: 1275 TGFWSKLSSFVRSPAY----DVFGLETNRQYRFRVRAENQYGVSEPLELDNSITAKFPFT 1330
+ + + + + RV A + I
Sbjct: 67 LCRLHQAPTARGAVRFWCSLPTADTSSFVPLELRVTAASGAPRYHR-----VIHINEVVL 121
Query: 1331 VPDPPGQPQIVDWDTNNATLMWDRPRTDGGSKIQGYKMLLKTPTGELPTTIWSKIRPTSS 1390
+ P G + ++ + L W P + Y++ + ++
Sbjct: 122 LDAPVGLVARLADESGHVVLRWLPPPETPMTSHIRYEVDVSA---GQGAGSVQRVEILEG 178
Query: 1391 TVYCK 1395
C
Sbjct: 179 RTECV 183
Score = 30.5 bits (68), Expect = 6.1
Identities = 24/218 (11%), Positives = 42/218 (19%), Gaps = 32/218 (14%)
Query: 984 SKPALTIDPIKAKHPFDVPGAPGAPKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLI 1043
P ++K P + + W G +Y
Sbjct: 3 FPPPNPDPKFESKAALLAARGPEELLCFTERLEDLVCFWE-EAASAGVGPGQY------- 54
Query: 1044 SDDKWIKASMAHIPDTSLKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHE 1103
S Y L K + TA+ +P TS
Sbjct: 55 ----------------SFSYQLEDEPWKLCRLHQAPTARGAVRFWCSLPTADTSS--FVP 96
Query: 1104 YEFRVCAVNAAGQGPWSSSSDIIMCCAPPCAPKITSDLSIRDMTV------LAGEEFTIT 1157
E RV A + A + + ++ P + + I
Sbjct: 97 LELRVTAASGAPRYHRVIHINEVVLLDAPVGLVARLADESGHVVLRWLPPPETPMTSHIR 156
Query: 1158 VPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQTIYR 1195
+ + +T Y
Sbjct: 157 YEVDVSAGQGAGSVQRVEILEGRTECVLSNLRGRTRYT 194
Score = 30.5 bits (68), Expect = 6.1
Identities = 15/101 (14%), Positives = 23/101 (22%), Gaps = 10/101 (9%)
Query: 670 PDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIV--------EKREHPMSSWIRVGN 721
P+ + L W G Y K + G
Sbjct: 21 ARGPEELLCFTERLEDLVCFWEEAA-SAGVGPGQYSFSYQLEDEPWKLCRLHQAPTARGA 79
Query: 722 TRFT-TMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLIT 761
RF ++ S E RV A + R + +
Sbjct: 80 VRFWCSLPTADTSSFVPLELRVTAASGAPRYHRVIHINEVV 120
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG
containing, ligand binding protein,membr protein; HET:
NAG MAN; 2.70A {Homo sapiens}
Length = 477
Score = 65.1 bits (159), Expect = 1e-10
Identities = 26/95 (27%), Positives = 37/95 (38%), Gaps = 6/95 (6%)
Query: 479 KAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSA---RHHIFAEGDT 535
+A + + H QF C G P P I WL + + + R +F +G
Sbjct: 384 RARIRDRKAQQVFVDEGHTVQFVCRADGDPPPAILWLSPRKHLVSAKSNGRLTVFPDG-- 441
Query: 536 YTLIINSVYGVDADEYVCRAVNKGGVKSTKAELII 570
TL + D Y+C A N GG S A L +
Sbjct: 442 -TLEVRYAQVQDNGTYLCIAANAGGNDSMPAHLHV 475
Score = 65.1 bits (159), Expect = 1e-10
Identities = 26/95 (27%), Positives = 37/95 (38%), Gaps = 6/95 (6%)
Query: 2086 KAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSA---RHHIFAEGDT 2142
+A + + H QF C G P P I WL + + + R +F +G
Sbjct: 384 RARIRDRKAQQVFVDEGHTVQFVCRADGDPPPAILWLSPRKHLVSAKSNGRLTVFPDG-- 441
Query: 2143 YTLIINSVYGVDADEYVCRAVNKGGVKSTKAELII 2177
TL + D Y+C A N GG S A L +
Sbjct: 442 -TLEVRYAQVQDNGTYLCIAANAGGNDSMPAHLHV 475
Score = 62.8 bits (153), Expect = 7e-10
Identities = 24/101 (23%), Positives = 32/101 (31%), Gaps = 6/101 (5%)
Query: 83 CEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLR-NGREIS--SGARYRV 139
F + + V G + C A G P P WL +S S R V
Sbjct: 378 NYFTCRRARIRDRKAQQVFVDEGHTVQFVCRADGDPPPAILWLSPRKHLVSAKSNGRLTV 437
Query: 140 ETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKI 180
G L DNG Y C A N+ G + + +
Sbjct: 438 FPDGT---LEVRYAQVQDNGTYLCIAANAGGNDSMPAHLHV 475
Score = 62.8 bits (153), Expect = 7e-10
Identities = 24/101 (23%), Positives = 32/101 (31%), Gaps = 6/101 (5%)
Query: 1690 CEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLR-NGREIS--SGARYRV 1746
F + + V G + C A G P P WL +S S R V
Sbjct: 378 NYFTCRRARIRDRKAQQVFVDEGHTVQFVCRADGDPPPAILWLSPRKHLVSAKSNGRLTV 437
Query: 1747 ETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKI 1787
G L DNG Y C A N+ G + + +
Sbjct: 438 FPDGT---LEVRYAQVQDNGTYLCIAANAGGNDSMPAHLHV 475
Score = 55.9 bits (135), Expect = 1e-07
Identities = 22/97 (22%), Positives = 33/97 (34%), Gaps = 6/97 (6%)
Query: 574 PKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVI---ESGGHFHVETSER 630
+ + R + D+G V G P P I W + + +S G V
Sbjct: 383 RRARIRDRKAQQVFVDEGHTVQFVCRADGDPPPAILWLSPRKHLVSAKSNGRLTVFPD-- 440
Query: 631 HAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQIS 667
L +R A D Y +A N G DS + +
Sbjct: 441 -GTLEVRYAQVQDNGTYLCIAANAGGNDSMPAHLHVR 476
Score = 51.6 bits (124), Expect = 2e-06
Identities = 24/124 (19%), Positives = 40/124 (32%), Gaps = 8/124 (6%)
Query: 1108 VCA--VNAAGQGPWSSSSDIIMCCAPPCAPKITSDLSIRDMTVLAGEEFTITVPFSGRPK 1165
CA G+ + D+++ C D + + V G G P
Sbjct: 356 TCATPEFVQGK-EFKDFPDVLLPNYFTCRRARIRDRKAQQVFVDEGHTVQFVCRADGDPP 414
Query: 1166 PTPIWTV-NGDEVSPDGRIKFETSENQTIY-RNKSAKRATDSGSYTIQLVNTVGSDSASC 1223
P +W VS + + T+ R D+G+Y N G+DS
Sbjct: 415 PAILWLSPRKHLVSAKSNGRLTVFPDGTLEVRYAQ---VQDNGTYLCIAANAGGNDSMPA 471
Query: 1224 KVYV 1227
++V
Sbjct: 472 HLHV 475
Score = 50.1 bits (120), Expect = 7e-06
Identities = 18/93 (19%), Positives = 38/93 (40%), Gaps = 2/93 (2%)
Query: 183 PPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVS-LTKNGRVVQSDDRFKFTVLDDYIII 241
DR +++ EG + GD P + L+ +V + + TV D +
Sbjct: 385 ARIRDRKAQQVFVDEGHTVQFVCRADGDPPPAILWLSPRKHLVSAKSNGRLTVFPDGTLE 444
Query: 242 FIKEIRKEDAGDYTVNLSNSSGSVSGTFTINIT 274
++ + +D G Y +N+ G+ S +++
Sbjct: 445 -VRYAQVQDNGTYLCIAANAGGNDSMPAHLHVR 476
Score = 50.1 bits (120), Expect = 7e-06
Identities = 18/93 (19%), Positives = 38/93 (40%), Gaps = 2/93 (2%)
Query: 1790 PPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVS-LTKNGRVVQSDDRFKFTVLDDYIII 1848
DR +++ EG + GD P + L+ +V + + TV D +
Sbjct: 385 ARIRDRKAQQVFVDEGHTVQFVCRADGDPPPAILWLSPRKHLVSAKSNGRLTVFPDGTLE 444
Query: 1849 FIKEIRKEDAGDYTVNLSNSSGSVSGTFTINIT 1881
++ + +D G Y +N+ G+ S +++
Sbjct: 445 -VRYAQVQDNGTYLCIAANAGGNDSMPAHLHVR 476
Score = 43.9 bits (104), Expect = 5e-04
Identities = 17/101 (16%), Positives = 30/101 (29%), Gaps = 11/101 (10%)
Query: 1410 SGPVIVEEQPNKPVMDLSGVRDITVKAGEDFSIHVPFMAFPQPAAFWFANDSIIDDSDTR 1469
I + + + V G P PA W + + + +
Sbjct: 383 RRARIRDRKAQ----------QVFVDEGHTVQFVCRADGDPPPAILWLSPRKHLVSAKSN 432
Query: 1470 VHKQLTMNSASLVVKNSQRSDGGQYRLQLKNPAGFDTATLH 1510
+ + +L V+ +Q D G Y N G D+ H
Sbjct: 433 GRLTVFPDG-TLEVRYAQVQDNGTYLCIAANAGGNDSMPAH 472
>1iar_B Protein (interleukin-4 receptor alpha chain); cytokine
receptor,interleukin-4, cytokine/receptor complex; 2.30A
{Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3bpl_B*
3bpn_B* 3bpo_B*
Length = 207
Score = 62.0 bits (150), Expect = 2e-10
Identities = 33/194 (17%), Positives = 54/194 (27%), Gaps = 17/194 (8%)
Query: 293 TCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHDT----TFIVQGLTEGQEYL 348
TC W + + + CI ++ + Y
Sbjct: 18 TCE--WKMNGPTNCSTELRLLYQLVFLLSEAHTCIPENNGGAGCVCHLLMDDVVSADNYT 75
Query: 349 FHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSR 408
+ A + + +K P PG V D + L+W P
Sbjct: 76 LDLWAGQQLLWKGSFKPSEHVK-------PRAPGNLTVHTNVSDTLLLTWSNPYPPDNYL 128
Query: 409 IQG--YWID-KHEVGSDAWQRVNVAICAPS-QINIPNLIEGRQYEFRVYAQNEAGLSLPS 464
Y ++ E ++ NV PS +I L G Y RV A +A + S
Sbjct: 129 YNHLTYAVNIWSENDPADFRIYNVTYLEPSLRIAASTLKSGISYRARVRAWAQAYNTTWS 188
Query: 465 SASNSVQIKDPMAA 478
S S + +
Sbjct: 189 EWSPSTKWHNSYRE 202
Score = 62.0 bits (150), Expect = 2e-10
Identities = 33/194 (17%), Positives = 54/194 (27%), Gaps = 17/194 (8%)
Query: 1900 TCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHDT----TFIVQGLTEGQEYL 1955
TC W + + + CI ++ + Y
Sbjct: 18 TCE--WKMNGPTNCSTELRLLYQLVFLLSEAHTCIPENNGGAGCVCHLLMDDVVSADNYT 75
Query: 1956 FHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSR 2015
+ A + + +K P PG V D + L+W P
Sbjct: 76 LDLWAGQQLLWKGSFKPSEHVK-------PRAPGNLTVHTNVSDTLLLTWSNPYPPDNYL 128
Query: 2016 IQG--YWID-KHEVGSDAWQRVNVAICAPS-QINIPNLIEGRQYEFRVYAQNEAGLSLPS 2071
Y ++ E ++ NV PS +I L G Y RV A +A + S
Sbjct: 129 YNHLTYAVNIWSENDPADFRIYNVTYLEPSLRIAASTLKSGISYRARVRAWAQAYNTTWS 188
Query: 2072 SASNSVQIKDPMAA 2085
S S + +
Sbjct: 189 EWSPSTKWHNSYRE 202
Score = 55.4 bits (133), Expect = 3e-08
Identities = 32/214 (14%), Positives = 51/214 (23%), Gaps = 43/214 (20%)
Query: 917 SLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTKVSSYVTTP----FVRVRNLAIGSTYE 972
T W S + + S T + + + ++ Y
Sbjct: 16 ISTCEWKMNGPTNCSTELRLLYQLVFLLSEAHTCIPENNGGAGCVCHLLMDDVVSADNYT 75
Query: 973 FRVMAENQYGLSKPALTIDPIKAKHPFDVPGAPGAPKGVDSTEDSISLVWSKPRHDGGSP 1032
+ A Q + +K P APG + D++ L WS P
Sbjct: 76 LDLWAGQQLLWKGSFKPSEHVK-------PRAPGNLTVHTNVSDTLLLTWSNPYPPDNYL 128
Query: 1033 IQ--RYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEGKSIGSERGSTAQFLELLLMF 1090
Y V +D + + SL+
Sbjct: 129 YNHLTYAVNIWSENDPADFRIYNVTYLEPSLRIA-------------------------- 162
Query: 1091 IPNRVTSLIENHEYEFRVCAVNAAGQGPWSSSSD 1124
++L Y RV A A WS S
Sbjct: 163 ----ASTLKSGISYRARVRAWAQAYNTTWSEWSP 192
Score = 45.8 bits (108), Expect = 4e-05
Identities = 25/131 (19%), Positives = 41/131 (31%), Gaps = 7/131 (5%)
Query: 254 YTVNL-SNSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPP---KYDGGLKV 309
YT++L + G+F + P P L V T L W+ P +
Sbjct: 74 YTLDLWAGQQLLWKGSFKPSEHVKPRAPGN-LTVHTNVSDTLLLTWSNPYPPDNYLYNHL 132
Query: 310 THYVVERRDISMPHWICISTTCHDTT--FIVQGLTEGQEYLFHVMAVNENGMGPPLEGIN 367
T+ V + + + T + + L G Y V A + E
Sbjct: 133 TYAVNIWSENDPADFRIYNVTYLEPSLRIAASTLKSGISYRARVRAWAQAYNTTWSEWSP 192
Query: 368 PIKAKSPYDKP 378
K + Y +P
Sbjct: 193 STKWHNSYREP 203
Score = 45.8 bits (108), Expect = 4e-05
Identities = 25/131 (19%), Positives = 41/131 (31%), Gaps = 7/131 (5%)
Query: 1861 YTVNL-SNSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPP---KYDGGLKV 1916
YT++L + G+F + P P L V T L W+ P +
Sbjct: 74 YTLDLWAGQQLLWKGSFKPSEHVKPRAPGN-LTVHTNVSDTLLLTWSNPYPPDNYLYNHL 132
Query: 1917 THYVVERRDISMPHWICISTTCHDTT--FIVQGLTEGQEYLFHVMAVNENGMGPPLEGIN 1974
T+ V + + + T + + L G Y V A + E
Sbjct: 133 TYAVNIWSENDPADFRIYNVTYLEPSLRIAASTLKSGISYRARVRAWAQAYNTTWSEWSP 192
Query: 1975 PIKAKSPYDKP 1985
K + Y +P
Sbjct: 193 STKWHNSYREP 203
Score = 45.8 bits (108), Expect = 5e-05
Identities = 20/91 (21%), Positives = 33/91 (36%), Gaps = 5/91 (5%)
Query: 901 RPHPPENLHADEFAGDSLTLYWTPPRDNGG---SEITNYVVEKKDYNSTVWTKVSSYVTT 957
+P P NL D+L L W+ P + +T V + + + +
Sbjct: 97 KPRAPGNLTVHTNVSDTLLLTWSNPYPPDNYLYNHLTYAVNIWSENDPADFRIYNVTYLE 156
Query: 958 PFVRV--RNLAIGSTYEFRVMAENQYGLSKP 986
P +R+ L G +Y RV A Q +
Sbjct: 157 PSLRIAASTLKSGISYRARVRAWAQAYNTTW 187
Score = 43.5 bits (102), Expect = 3e-04
Identities = 21/109 (19%), Positives = 35/109 (32%), Gaps = 7/109 (6%)
Query: 1209 TIQLVNTVGSDSASCKVYVVDKPSPPQGPLDVSDITPESCSLSWKPPLDDGGSPITN--Y 1266
+ + + V KP P L V ++ L+W P + Y
Sbjct: 77 DLWAGQQLLWKGSFKPSEHV-KPRAPGN-LTVHTNVSDTLLLTWSNPYPPDNYLYNHLTY 134
Query: 1267 VVE-KYESATGFWSKLSSFVRSPAYDVFG--LETNRQYRFRVRAENQYG 1312
V E+ + + P+ + L++ YR RVRA Q
Sbjct: 135 AVNIWSENDPADFRIYNVTYLEPSLRIAASTLKSGISYRARVRAWAQAY 183
Score = 42.7 bits (100), Expect = 4e-04
Identities = 28/134 (20%), Positives = 40/134 (29%), Gaps = 7/134 (5%)
Query: 634 LTIRDASNVDTAPYRVVAENDLGMDSAIVKIQISDRPDPPQFPTVEDIGHDSLALVWRAP 693
L + D + D + A L K +P P TV D+L L W P
Sbjct: 63 LLMDDVVSADNYTLDLWAGQQLLWKG-SFKPSEHVKPRAPGNLTVHTNVSDTLLLTWSNP 121
Query: 694 IWDGGSNITN--YIVEKREHPMSSWIRVGNTRF----TTMAITGLSPGHQYEFRVYAENV 747
+ Y V + R+ N + +A + L G Y RV A
Sbjct: 122 YPPDNYLYNHLTYAVNIWSENDPADFRIYNVTYLEPSLRIAASTLKSGISYRARVRAWAQ 181
Query: 748 YGRSDPSTTSDLIT 761
+ S S
Sbjct: 182 AYNTTWSEWSPSTK 195
Score = 38.5 bits (89), Expect = 0.012
Identities = 12/109 (11%), Positives = 26/109 (23%), Gaps = 11/109 (10%)
Query: 1251 SWKPPLDDGGSPITNYVVEKYESATGFWSKLSSFVRSPA----YDVFGLETNRQYRFRVR 1306
WK S + + + + + + + + Y +
Sbjct: 20 EWKMNGPTNCSTELRLLYQLVFLLSEAHTCIPENNGGAGCVCHLLMDDVVSADNYTLDLW 79
Query: 1307 AENQYGVSEPLELDNSITAKFPFTVPDPPGQPQIVDWDTNNATLMWDRP 1355
A Q + + P PG + ++ L W P
Sbjct: 80 AGQQLLWKGSFKPSEHVK-------PRAPGNLTVHTNVSDTLLLTWSNP 121
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint,
transferase-transferase inhib complex; HET: S25; 1.60A
{Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A*
2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Length = 323
Score = 63.9 bits (156), Expect = 2e-10
Identities = 20/79 (25%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Query: 820 DHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLE-KELIRKEIDIMNQLHHPK 878
+ +D+++ +G GA+G V R T A K + + ++ E I+KEI I L+H
Sbjct: 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 66
Query: 879 LINLHDAFEDDDEMVLIFE 897
++ + + + L E
Sbjct: 67 VVKFYGHRREGNIQYLFLE 85
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine
protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3,
ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A*
1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Length = 328
Score = 63.9 bits (156), Expect = 2e-10
Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Query: 821 HYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSH--NLEKELIRKEIDIMNQLHHPK 878
+Y +L+ IG G F V R TG A K I + + + +E+ IM L+HP
Sbjct: 16 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPN 75
Query: 879 LINLHDAFEDDDEMVLIFE 897
++ L + E + + LI E
Sbjct: 76 IVKLFEVIETEKTLYLIME 94
>1y6k_R Interleukin-10 receptor alpha chain; helix bundle, receptor
complex, immune system; 2.52A {Homo sapiens} SCOP:
b.1.2.1 b.1.2.1 PDB: 1j7v_R* 1lqs_R 1y6m_R 1y6n_R
Length = 214
Score = 62.1 bits (150), Expect = 2e-10
Identities = 25/174 (14%), Positives = 45/174 (25%), Gaps = 20/174 (11%)
Query: 295 TLHWNPPKYDGGLKVTHYVVERRDISMPHWI----CISTTCHDTTFIVQGLTEGQEYLFH 350
LHW P T Y V + W C T +D T + L Y
Sbjct: 21 ILHWTPIPQQSE--STCYEVALLRYGIESWNSISQCSQTLSYDLTAVTLDLYHSNGYRAR 78
Query: 351 VMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGG---- 406
V AV+ + + + + G + +P
Sbjct: 79 VRAVDGSRHSQWTVTNTRFSVDEV--TLTVGSVNLEIHNGFILGKIQLPRPKMAPAQDTY 136
Query: 407 SRIQGYWID-----KHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQ 455
I ++ + + G + V Q ++ E ++ +V
Sbjct: 137 ESIFSHFREYEIAIRKVPGQFTFTHKKVKHE---QFSLLTSGEVGEFCVQVKPS 187
Score = 62.1 bits (150), Expect = 2e-10
Identities = 25/174 (14%), Positives = 45/174 (25%), Gaps = 20/174 (11%)
Query: 1902 TLHWNPPKYDGGLKVTHYVVERRDISMPHWI----CISTTCHDTTFIVQGLTEGQEYLFH 1957
LHW P T Y V + W C T +D T + L Y
Sbjct: 21 ILHWTPIPQQSE--STCYEVALLRYGIESWNSISQCSQTLSYDLTAVTLDLYHSNGYRAR 78
Query: 1958 VMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGG---- 2013
V AV+ + + + + G + +P
Sbjct: 79 VRAVDGSRHSQWTVTNTRFSVDEV--TLTVGSVNLEIHNGFILGKIQLPRPKMAPAQDTY 136
Query: 2014 SRIQGYWID-----KHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQ 2062
I ++ + + G + V Q ++ E ++ +V
Sbjct: 137 ESIFSHFREYEIAIRKVPGQFTFTHKKVKHE---QFSLLTSGEVGEFCVQVKPS 187
Score = 55.9 bits (134), Expect = 2e-08
Identities = 24/159 (15%), Positives = 43/159 (27%), Gaps = 17/159 (10%)
Query: 904 PPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTKVSSYVTTPFVRV- 962
P ++ + L+WTP SE T Y V Y W +S T +
Sbjct: 7 SPPSVWFEAE-FFHHILHWTPIPQ--QSESTCYEVALLRYGIESWNSISQCSQTLSYDLT 63
Query: 963 ---RNLAIGSTYEFRVMAENQYGLSKPALTIDPIKAKHPFDVPGAPGAPKGVDSTEDSIS 1019
+L + Y RV A + S+ +T + +
Sbjct: 64 AVTLDLYHSNGYRARVRAVDGSRHSQWTVTNTRFSVDEV--TLTVGSVNLEIHNGFILGK 121
Query: 1020 LVWSKPRHDGGSP--------IQRYIVEKRLISDDKWIK 1050
+ +P+ + Y + R +
Sbjct: 122 IQLPRPKMAPAQDTYESIFSHFREYEIAIRKVPGQFTFT 160
Score = 47.0 bits (111), Expect = 2e-05
Identities = 21/115 (18%), Positives = 35/115 (30%), Gaps = 8/115 (6%)
Query: 1250 LSWKPPLDDGGSPITNYVVEKYESATGFWSKLSSFVRSPAYDVFG----LETNRQYRFRV 1305
L W P S T Y V W+ +S ++ +YD+ L + YR RV
Sbjct: 22 LHWTPI--PQQSESTCYEVALLRYGIESWNSISQCSQTLSYDLTAVTLDLYHSNGYRARV 79
Query: 1306 RAENQYGVSEPLELDNSITAKFPFTVPDPPGQPQIVDWDTNNATLMWDRPRTDGG 1360
RA + S+ + + + + RP+
Sbjct: 80 RAVDGSRHSQWTVTNTRFS--VDEVTLTVGSVNLEIHNGFILGKIQLPRPKMAPA 132
Score = 43.6 bits (102), Expect = 3e-04
Identities = 16/83 (19%), Positives = 27/83 (32%), Gaps = 7/83 (8%)
Query: 688 LVWRAPIWDGGSNITNYIVEKREHPMSSWIRV-GNTRFT----TMAITGLSPGHQYEFRV 742
L W S T Y V + + SW + ++ T L + Y RV
Sbjct: 22 LHWTPI--PQQSESTCYEVALLRYGIESWNSISQCSQTLSYDLTAVTLDLYHSNGYRARV 79
Query: 743 YAENVYGRSDPSTTSDLITTKDT 765
A + S + T+ + +
Sbjct: 80 RAVDGSRHSQWTVTNTRFSVDEV 102
Score = 38.6 bits (89), Expect = 0.011
Identities = 14/111 (12%), Positives = 29/111 (26%), Gaps = 18/111 (16%)
Query: 658 DSAIVKIQISDRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSWI 717
+ KIQ+ P T E I + Y + R+ P
Sbjct: 116 GFILGKIQLPRPKMAPAQDTYESIFS----------------HFREYEIAIRKVPGQFTF 159
Query: 718 RVGNTRFTTMAITGLSPGHQYEFRV--YAENVYGRSDPSTTSDLITTKDTF 766
+ ++ ++ +V + + S + T+ F
Sbjct: 160 THKKVKHEQFSLLTSGEVGEFCVQVKPSVASRSNKGMWSKEECISLTRQYF 210
>2cui_A Tenascin-X; fibronectin type III domain, extracellular matirx,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
b.1.2.1
Length = 112
Score = 59.2 bits (143), Expect = 2e-10
Identities = 15/116 (12%), Positives = 34/116 (29%), Gaps = 20/116 (17%)
Query: 1229 DKPSPPQGPLDVSDITPESCSLSWKPPLDDGGSPITNYVVEKYESATGFWSKLSSFVRSP 1288
P L V+D+T S L+W+ P ++++ + +
Sbjct: 6 SGSRPRLSQLSVTDVTTSSLRLNWEAPPG----AFDSFLLRFGVPSPSTLEPHPRPLLQR 61
Query: 1289 ---------AYDVFGLETNRQYRFRVRAENQYGVSEPLELDNSITAKFPFTVPDPP 1335
+ + L + Y + ++ + TA+ T+ P
Sbjct: 62 ELMVPGTRHSAVLRDLRSGTLYSLTLYGLRGPHKADSI----QGTAR---TLSGPS 110
Score = 57.7 bits (139), Expect = 7e-10
Identities = 14/98 (14%), Positives = 27/98 (27%), Gaps = 14/98 (14%)
Query: 670 PDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSWIRVGNTRF----- 724
+V D+ SL L W AP ++++ S+
Sbjct: 9 RPRLSQLSVTDVTTSSLRLNWEAPPGA----FDSFLLRFGVPSPSTLEPHPRPLLQRELM 64
Query: 725 -----TTMAITGLSPGHQYEFRVYAENVYGRSDPSTTS 757
+ + L G Y +Y ++D +
Sbjct: 65 VPGTRHSAVLRDLRSGTLYSLTLYGLRGPHKADSIQGT 102
Score = 56.9 bits (137), Expect = 1e-09
Identities = 14/98 (14%), Positives = 32/98 (32%), Gaps = 5/98 (5%)
Query: 274 TGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCH- 332
+ P + L V+++T + L+W P + + V PH +
Sbjct: 5 SSGSRPRLSQLSVTDVTTSSLRLNWEAPPGAFDSFLLRFGVPSPSTLEPHPRPLLQRELM 64
Query: 333 ----DTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGI 366
+ +++ L G Y + + ++G
Sbjct: 65 VPGTRHSAVLRDLRSGTLYSLTLYGLRGPHKADSIQGT 102
Score = 56.9 bits (137), Expect = 1e-09
Identities = 14/98 (14%), Positives = 32/98 (32%), Gaps = 5/98 (5%)
Query: 1881 TGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCH- 1939
+ P + L V+++T + L+W P + + V PH +
Sbjct: 5 SSGSRPRLSQLSVTDVTTSSLRLNWEAPPGAFDSFLLRFGVPSPSTLEPHPRPLLQRELM 64
Query: 1940 ----DTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGI 1973
+ +++ L G Y + + ++G
Sbjct: 65 VPGTRHSAVLRDLRSGTLYSLTLYGLRGPHKADSIQGT 102
Score = 45.4 bits (107), Expect = 1e-05
Identities = 13/94 (13%), Positives = 25/94 (26%), Gaps = 4/94 (4%)
Query: 378 PSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDK----HEVGSDAWQRVNVAICA 433
VT V + L+W+ P S + + + QR +
Sbjct: 9 RPRLSQLSVTDVTTSSLRLNWEAPPGAFDSFLLRFGVPSPSTLEPHPRPLLQRELMVPGT 68
Query: 434 PSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSAS 467
+ +L G Y +Y + +
Sbjct: 69 RHSAVLRDLRSGTLYSLTLYGLRGPHKADSIQGT 102
Score = 45.4 bits (107), Expect = 1e-05
Identities = 13/94 (13%), Positives = 25/94 (26%), Gaps = 4/94 (4%)
Query: 1985 PSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDK----HEVGSDAWQRVNVAICA 2040
VT V + L+W+ P S + + + QR +
Sbjct: 9 RPRLSQLSVTDVTTSSLRLNWEAPPGAFDSFLLRFGVPSPSTLEPHPRPLLQRELMVPGT 68
Query: 2041 PSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSAS 2074
+ +L G Y +Y + +
Sbjct: 69 RHSAVLRDLRSGTLYSLTLYGLRGPHKADSIQGT 102
Score = 43.8 bits (103), Expect = 5e-05
Identities = 11/93 (11%), Positives = 24/93 (25%), Gaps = 13/93 (13%)
Query: 904 PPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTKVSSYVTTPFVRV- 962
L + SL L W P ++++ + + + + V
Sbjct: 11 RLSQLSVTDVTTSSLRLNWEAPPG----AFDSFLLRFGVPSPSTLEPHPRPLLQRELMVP 66
Query: 963 --------RNLAIGSTYEFRVMAENQYGLSKPA 987
R+L G+ Y + +
Sbjct: 67 GTRHSAVLRDLRSGTLYSLTLYGLRGPHKADSI 99
Score = 34.6 bits (79), Expect = 0.068
Identities = 14/123 (11%), Positives = 27/123 (21%), Gaps = 28/123 (22%)
Query: 1001 VPGAPGAPKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTS 1060
D T S+ L W P +++ + S P
Sbjct: 8 SRPRLSQLSVTDVTTSSLRLNWEAPP----GAFDSFLLRFGVPSPSTL-----EPHPRPL 58
Query: 1061 LKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPWS 1120
L+ L V G+ + + L Y + + +
Sbjct: 59 LQRELMVP-----GTRHSAV--------------LRDLRSGTLYSLTLYGLRGPHKADSI 99
Query: 1121 SSS 1123
+
Sbjct: 100 QGT 102
Score = 33.0 bits (75), Expect = 0.25
Identities = 15/122 (12%), Positives = 26/122 (21%), Gaps = 41/122 (33%)
Query: 1559 VDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEG 1618
D T S+ L W P +++ + S
Sbjct: 18 TDVTTSSLRLNWEAPP----GAFDSFLLRFGVPSPSTL---------------------- 51
Query: 1619 KSIGSERGSTAQFLEREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKS 1678
E V G S + +L G Y + + K+
Sbjct: 52 ----EPHPRPLLQRELMVPGT-----------RHSAVLRDLRSGTLYSLTLYGLRGPHKA 96
Query: 1679 EP 1680
+
Sbjct: 97 DS 98
Score = 29.9 bits (67), Expect = 3.2
Identities = 5/28 (17%), Positives = 11/28 (39%)
Query: 46 SFSVLNLVEGNDYEFRIIAVNAIGKSEP 73
S + +L G Y + + K++
Sbjct: 71 SAVLRDLRSGTLYSLTLYGLRGPHKADS 98
>3qwq_B Adnectin; cell surface receptor, tyrosine kinase, glycoprotein,
adnect antitumor, drug, engineered binding protein; HET:
NAG BMA MAN FUC; 2.75A {Homo sapiens} PDB: 3qwr_D*
Length = 114
Score = 58.8 bits (142), Expect = 2e-10
Identities = 20/91 (21%), Positives = 29/91 (31%), Gaps = 8/91 (8%)
Query: 670 PDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSW---IRVGNTRFTT 726
D P+ V SL + W + + Y + E +S V T
Sbjct: 4 SDVPRDLEVVAATPTSLLISWDSG----RGSYQYYRITYGETGGNSPVQEFTVPGPV-HT 58
Query: 727 MAITGLSPGHQYEFRVYAENVYGRSDPSTTS 757
I+GL PG Y VYA + +
Sbjct: 59 ATISGLKPGVDYTITVYAVTDHKPHADGPHT 89
Score = 58.4 bits (141), Expect = 4e-10
Identities = 23/117 (19%), Positives = 32/117 (27%), Gaps = 12/117 (10%)
Query: 1231 PSPPQGPLDVSDITPESCSLSWKPPLDDGGSPITNYVVEKYESATGFWSKLSSFVRSPA- 1289
P+ L+V TP S +SW Y + Y G V P
Sbjct: 4 SDVPRD-LEVVAATPTSLLISWDSG----RGSYQYYRIT-YGETGGNSPVQEFTVPGPVH 57
Query: 1290 -YDVFGLETNRQYRFRVRAENQYGVSEPLELDNS---ITAKFPFTVPDPPGQPQIVD 1342
+ GL+ Y V A + I+ + T D P Q
Sbjct: 58 TATISGLKPGVDYTITVYAVTDHKPHADGPHTYHESPISINYR-TEIDKPSQHHHHH 113
Score = 54.9 bits (132), Expect = 6e-09
Identities = 20/111 (18%), Positives = 37/111 (33%), Gaps = 11/111 (9%)
Query: 275 GLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWI-CISTTCHD 333
G+ P L+V T + + W+ + +Y + + + +
Sbjct: 2 GVSDVPRD-LEVVAATPTSLLISWDSGR----GSYQYYRITYGETGGNSPVQEFTVPGPV 56
Query: 334 TTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINP-----IKAKSPYDKPS 379
T + GL G +Y V AV ++ I ++ DKPS
Sbjct: 57 HTATISGLKPGVDYTITVYAVTDHKPHADGPHTYHESPISINYRTEIDKPS 107
Score = 54.9 bits (132), Expect = 6e-09
Identities = 20/111 (18%), Positives = 37/111 (33%), Gaps = 11/111 (9%)
Query: 1882 GLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWI-CISTTCHD 1940
G+ P L+V T + + W+ + +Y + + + +
Sbjct: 2 GVSDVPRD-LEVVAATPTSLLISWDSGR----GSYQYYRITYGETGGNSPVQEFTVPGPV 56
Query: 1941 TTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINP-----IKAKSPYDKPS 1986
T + GL G +Y V AV ++ I ++ DKPS
Sbjct: 57 HTATISGLKPGVDYTITVYAVTDHKPHADGPHTYHESPISINYRTEIDKPS 107
Score = 51.8 bits (124), Expect = 7e-08
Identities = 17/90 (18%), Positives = 24/90 (26%), Gaps = 4/90 (4%)
Query: 378 PSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQI 437
P V + +SWD Q Y I E G ++ +
Sbjct: 4 SDVPRDLEVVAATPTSLLISWDSG----RGSYQYYRITYGETGGNSPVQEFTVPGPVHTA 59
Query: 438 NIPNLIEGRQYEFRVYAQNEAGLSLPSSAS 467
I L G Y VYA + +
Sbjct: 60 TISGLKPGVDYTITVYAVTDHKPHADGPHT 89
Score = 51.8 bits (124), Expect = 7e-08
Identities = 17/90 (18%), Positives = 24/90 (26%), Gaps = 4/90 (4%)
Query: 1985 PSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQI 2044
P V + +SWD Q Y I E G ++ +
Sbjct: 4 SDVPRDLEVVAATPTSLLISWDSG----RGSYQYYRITYGETGGNSPVQEFTVPGPVHTA 59
Query: 2045 NIPNLIEGRQYEFRVYAQNEAGLSLPSSAS 2074
I L G Y VYA + +
Sbjct: 60 TISGLKPGVDYTITVYAVTDHKPHADGPHT 89
Score = 49.9 bits (119), Expect = 4e-07
Identities = 18/109 (16%), Positives = 26/109 (23%), Gaps = 14/109 (12%)
Query: 902 PHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTK---VSSYVTTP 958
P +L SL + W R Y + + + V V T
Sbjct: 4 SDVPRDLEVVAATPTSLLISWDSGR----GSYQYYRITYGETGGNSPVQEFTVPGPVHT- 58
Query: 959 FVRVRNLAIGSTYEFRVMAENQYGLSKPALTIDP-----IKAKHPFDVP 1002
+ L G Y V A + I + D P
Sbjct: 59 -ATISGLKPGVDYTITVYAVTDHKPHADGPHTYHESPISINYRTEIDKP 106
Score = 43.4 bits (102), Expect = 6e-05
Identities = 15/123 (12%), Positives = 28/123 (22%), Gaps = 36/123 (29%)
Query: 1001 VPGAPGAPKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTS 1060
V P + V +T S+ + W R Q Y + + ++ +P
Sbjct: 3 VSDVPRDLEVVAATPTSLLISWDSGR----GSYQYYRITYGETGGNSPVQEFT--VPGPV 56
Query: 1061 LKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPWS 1120
+ + L +Y V AV
Sbjct: 57 HTATI------------------------------SGLKPGVDYTITVYAVTDHKPHADG 86
Query: 1121 SSS 1123
+
Sbjct: 87 PHT 89
Score = 31.4 bits (71), Expect = 0.94
Identities = 15/73 (20%), Positives = 25/73 (34%), Gaps = 3/73 (4%)
Query: 22 YIIERREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVN---AIGKSEPSICTT 78
Y I E GG ++ + ++ L G DY + AV + +
Sbjct: 34 YRITYGETGGNSPVQEFTVPGPVHTATISGLKPGVDYTITVYAVTDHKPHADGPHTYHES 93
Query: 79 PVKICEFVGGEKP 91
P+ I +KP
Sbjct: 94 PISINYRTEIDKP 106
Score = 31.4 bits (71), Expect = 0.98
Identities = 12/62 (19%), Positives = 21/62 (33%), Gaps = 4/62 (6%)
Query: 1331 VPDPPGQPQIVDWDTNNATLMWDRPRTDGGSKIQGYKMLLKTPTGELPTTIWSKIRPTSS 1390
V D P ++V + + WD R Q Y++ G P ++ P +
Sbjct: 3 VSDVPRDLEVVAATPTSLLISWDSGR----GSYQYYRITYGETGGNSPVQEFTVPGPVHT 58
Query: 1391 TV 1392
Sbjct: 59 AT 60
Score = 29.5 bits (66), Expect = 3.9
Identities = 20/143 (13%), Positives = 35/143 (24%), Gaps = 52/143 (36%)
Query: 1559 VDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEG 1618
V +T S+ + W R Q Y + + ++
Sbjct: 13 VAATPTSLLISWDSGR----GSYQYYRITYGETGGNSPVQ-------------------- 48
Query: 1619 KSIGSERGSTAQFLEREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVN---AI 1675
E V G + ++ L G DY + AV
Sbjct: 49 --------------EFTVPGP-----------VHTATISGLKPGVDYTITVYAVTDHKPH 83
Query: 1676 GKSEPSICTTPVKICEFVGGEKP 1698
+ +P+ I +KP
Sbjct: 84 ADGPHTYHESPISINYRTEIDKP 106
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase;
HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB:
1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A*
1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A*
3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Length = 420
Score = 64.0 bits (156), Expect = 3e-10
Identities = 23/94 (24%), Positives = 45/94 (47%), Gaps = 15/94 (15%)
Query: 822 YDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQLHHPKLIN 881
Y + IG G+FGVV++ + +G + A K + +K +E+ IM +L H ++
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIVR 111
Query: 882 LHDAF------EDDDEMVLIFEVLDRPHPPENLH 909
L F +D+ + L+ + + PE ++
Sbjct: 112 LRYFFYSSGEKKDEVYLNLVLDYV-----PETVY 140
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle,
phosphorylation, ATP-BIN cell division, disease
mutation, kinase; 3.00A {Homo sapiens}
Length = 308
Score = 63.0 bits (154), Expect = 3e-10
Identities = 24/95 (25%), Positives = 47/95 (49%), Gaps = 15/95 (15%)
Query: 820 DHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKEL------IRKEIDIMNQ 873
Y+ + EIG GA+G V++ R+ +G+ A K + V + +R E+ ++ +
Sbjct: 9 SRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVR-EVALLRR 67
Query: 874 LH---HPKLINLHDAF-----EDDDEMVLIFEVLD 900
L HP ++ L D + + ++ L+FE +D
Sbjct: 68 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVD 102
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein
serine/threonine kinase, S based drug design, MAP3K14,
transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A*
4g3c_A 4dn5_A*
Length = 336
Score = 63.2 bits (154), Expect = 3e-10
Identities = 20/89 (22%), Positives = 40/89 (44%), Gaps = 5/89 (5%)
Query: 809 QPVDIKTSSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEI 868
+PVD + +G G+FG VHR ++++TG A K + + + +E+
Sbjct: 47 KPVDYEYREEVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRL-----EVFRVEEL 101
Query: 869 DIMNQLHHPKLINLHDAFEDDDEMVLIFE 897
L P+++ L+ A + + + E
Sbjct: 102 VACAGLSSPRIVPLYGAVREGPWVNIFME 130
>1axi_B HGHBP, growth hormone receptor; complex (hormone-receptor), complex
(hormone-receptor) compl; 2.10A {Homo sapiens} SCOP:
b.1.2.1 b.1.2.1 PDB: 1a22_B 1kf9_B 1hwg_B 1hwh_B 3hhr_B
2aew_A
Length = 236
Score = 61.8 bits (149), Expect = 3e-10
Identities = 36/236 (15%), Positives = 68/236 (28%), Gaps = 47/236 (19%)
Query: 902 PHPPENLHADEFAGDSLTLYWTPPRDNGGSE----ITNYVVEKKDYNSTVWTKVSSYVTT 957
P+ ++ + +WT +G Y + W + YV+
Sbjct: 30 SGEPKFTKCRSPERETFSCHWTDEVHHGTKNEGPIQLFYTRRNTQEWTQEWKECPDYVSA 89
Query: 958 P----FVRVRNLAIGSTYEFRVMAENQYGLSKPALTIDPIKAKHPFDVPGAPGAPKGVDS 1013
+ +I Y ++ + K ++D I P +
Sbjct: 90 GENSCYFNSSFTSIAIPYCIKLTSNGGTVDEKC-FSVDEIVQPDPPIALNWTLLNVSLTG 148
Query: 1014 TEDSISLVWSKPR---HDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEG 1070
I + W PR G + Y ++ + +++ KW M I TS+
Sbjct: 149 IHADIQVRWEAPRNADIQKGWMVLEYELQYKEVNETKWK--MMDPILTTSVP-------- 198
Query: 1071 KSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPWSSSSDII 1126
V SL + EYE RV + G + S+++
Sbjct: 199 ------------------------VYSLKVDKEYEVRVRS-KQRNSGNYGEFSEVL 229
Score = 60.6 bits (146), Expect = 7e-10
Identities = 33/232 (14%), Positives = 66/232 (28%), Gaps = 16/232 (6%)
Query: 255 TVNLSNSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVV 314
LS + S+ T G P S + T + HW + G +
Sbjct: 8 AAILSRAPWSLQSVNPGLKTNSSGEPKFTKCRSP-ERETFSCHWTDEVHHGTKNEGPIQL 66
Query: 315 ERRDISMPHWICISTTCHDT--------TFIVQGLTEGQEYLFHVMAVNENGMGPPLEGI 366
+ W C D F + Y + +
Sbjct: 67 FYTRRNTQEWTQEWKECPDYVSAGENSCYFNSSFTSIAIPYCIKLTSNGGTVDEKCFSVD 126
Query: 367 NPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLD---DGGSRIQGYWIDKHEVGSDA 423
++ P +T + D + + W+ P + G + Y + EV
Sbjct: 127 EIVQPDPPIALNWTLLNVSLTGIHAD-IQVRWEAPRNADIQKGWMVLEYELQYKEVNETK 185
Query: 424 WQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDP 475
W+ ++ + + + +L ++YE RV ++ S + + P
Sbjct: 186 WKMMDP--ILTTSVPVYSLKVDKEYEVRVRSKQRNS-GNYGEFSEVLYVTLP 234
Score = 60.6 bits (146), Expect = 7e-10
Identities = 33/232 (14%), Positives = 66/232 (28%), Gaps = 16/232 (6%)
Query: 1862 TVNLSNSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVV 1921
LS + S+ T G P S + T + HW + G +
Sbjct: 8 AAILSRAPWSLQSVNPGLKTNSSGEPKFTKCRSP-ERETFSCHWTDEVHHGTKNEGPIQL 66
Query: 1922 ERRDISMPHWICISTTCHDT--------TFIVQGLTEGQEYLFHVMAVNENGMGPPLEGI 1973
+ W C D F + Y + +
Sbjct: 67 FYTRRNTQEWTQEWKECPDYVSAGENSCYFNSSFTSIAIPYCIKLTSNGGTVDEKCFSVD 126
Query: 1974 NPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLD---DGGSRIQGYWIDKHEVGSDA 2030
++ P +T + D + + W+ P + G + Y + EV
Sbjct: 127 EIVQPDPPIALNWTLLNVSLTGIHAD-IQVRWEAPRNADIQKGWMVLEYELQYKEVNETK 185
Query: 2031 WQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDP 2082
W+ ++ + + + +L ++YE RV ++ S + + P
Sbjct: 186 WKMMDP--ILTTSVPVYSLKVDKEYEVRVRSKQRNS-GNYGEFSEVLYVTLP 234
Score = 49.0 bits (116), Expect = 5e-06
Identities = 19/106 (17%), Positives = 38/106 (35%), Gaps = 10/106 (9%)
Query: 648 RVVAENDLGMDSAIVKIQISDRPDPPQFPTVEDI------GHDSLALVWRAPIW---DGG 698
++ + D + +PDPP + H + + W AP G
Sbjct: 110 KLTSNGGTV-DEKCFSVDEIVQPDPPIALNWTLLNVSLTGIHADIQVRWEAPRNADIQKG 168
Query: 699 SNITNYIVEKREHPMSSWIRVGNTRFTTMAITGLSPGHQYEFRVYA 744
+ Y ++ +E + W + T++ + L +YE RV +
Sbjct: 169 WMVLEYELQYKEVNETKWKMMDPILTTSVPVYSLKVDKEYEVRVRS 214
Score = 47.5 bits (112), Expect = 2e-05
Identities = 36/217 (16%), Positives = 67/217 (30%), Gaps = 26/217 (11%)
Query: 1109 CAVNAAGQGPWSSSS-DIIMCCAPPCAPKITSDLSIRDMTVLA----GEEFTITVPFSGR 1163
+ PWS S + + PK T S T +
Sbjct: 6 ATAAILSRAPWSLQSVNPGLKTNSSGEPKFTKCRSPERETFSCHWTDEVH-----HGTKN 60
Query: 1164 PKPTPIWTVNGDEVSPDGRIK----FETSENQTIYRNKSAKRATDSGSYTIQLVNTVG-S 1218
P ++ + K + ++ + Y N S Y I+L + G
Sbjct: 61 EGPIQLFYTRRNTQEWTQEWKECPDYVSAGENSCYFNSSFTSIAIP--YCIKLTSNGGTV 118
Query: 1219 DSASCKVYVVDKPSPPQGPLDV-----SDITPESCSLSWKPPLD---DGGSPITNYVVEK 1270
D V + +P PP + W+ P + G + Y ++
Sbjct: 119 DEKCFSVDEIVQPDPPIALNWTLLNVSLTGIHADIQVRWEAPRNADIQKGWMVLEYELQY 178
Query: 1271 YESATGFWSKLSSFVRSPAYDVFGLETNRQYRFRVRA 1307
E W K+ + + + V+ L+ +++Y RVR+
Sbjct: 179 KEVNETKW-KMMDPILTTSVPVYSLKVDKEYEVRVRS 214
Score = 47.1 bits (111), Expect = 3e-05
Identities = 31/202 (15%), Positives = 57/202 (28%), Gaps = 16/202 (7%)
Query: 1205 SGSYTIQLVNTVGSDSASCKVYVVDKPSPPQGPLDVSDITPESCSL--SWKPPLDDG--- 1259
SGS + + S V K + P +PE + W + G
Sbjct: 2 SGSEATAAILSRAPWS-LQSVNPGLKTNSSGEPKFTKCRSPERETFSCHWTDEVHHGTKN 60
Query: 1260 -GSPITNYVVEKYESATGFWSKLSSFVRSPAY----DVFGLETNRQYRFRVRAENQYGVS 1314
G Y + T W + +V + + Y ++ +
Sbjct: 61 EGPIQLFYTRRNTQEWTQEWKECPDYVSAGENSCYFNSSFTSIAIPYCIKLTSNGGTVDE 120
Query: 1315 EPLELDNSITAKFPFTVPDPPGQPQIVDWDTNNATLMWDRPRT---DGGSKIQGYKMLLK 1371
+ +D + P + + + + W+ PR G + Y++ K
Sbjct: 121 KCFSVDEIVQP-DPPIALNWTLLNVSLTGIHADIQVRWEAPRNADIQKGWMVLEYELQYK 179
Query: 1372 TPTGELPTTIWSKIRPTSSTVY 1393
E + I TS VY
Sbjct: 180 -EVNETKWKMMDPILTTSVPVY 200
Score = 41.3 bits (96), Expect = 0.002
Identities = 21/107 (19%), Positives = 41/107 (38%), Gaps = 12/107 (11%)
Query: 872 NQLHHPKLINLHDAFEDDDEMVLIFEVLDRPHPPENLHADEFAGDSLTLYWTPPRD---N 928
K ++ + + D + L + +L+ + + + W PR+
Sbjct: 115 GGTVDEKCFSVDEIVQPDPPIALNWTLLNV--------SLTGIHADIQVRWEAPRNADIQ 166
Query: 929 GGSEITNYVVEKKDYNSTVWTKVSSYVTTPFVRVRNLAIGSTYEFRV 975
G + Y ++ K+ N T W + +TT V +L + YE RV
Sbjct: 167 KGWMVLEYELQYKEVNETKWKMMDPILTTSV-PVYSLKVDKEYEVRV 212
Score = 30.9 bits (69), Expect = 3.8
Identities = 8/55 (14%), Positives = 15/55 (27%), Gaps = 3/55 (5%)
Query: 22 YIIERREVGGAIWLKCNDYNVL---ECSFSVLNLVEGNDYEFRIIAVNAIGKSEP 73
Y + W +C DY C F+ Y ++ + +
Sbjct: 68 YTRRNTQEWTQEWKECPDYVSAGENSCYFNSSFTSIAIPYCIKLTSNGGTVDEKC 122
>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB,
inhibitor, LY333531, diabetes, cancer, transferase,
serine/threonine-protein kinase; HET: SEP LY4; 1.7A
{Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A*
1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A*
3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A*
3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ...
Length = 310
Score = 62.6 bits (153), Expect = 3e-10
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 17/86 (19%)
Query: 820 DHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELI--RKEI-------DI 870
+ + + +G G+F V RE T +A K LEK I ++ D+
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKI------LEKRHIIKENKVPYVTRERDV 83
Query: 871 MNQLHHPKLINLHDAFEDDDE--MVL 894
M++L HP + L+ F+DD++ L
Sbjct: 84 MSRLDHPFFVKLYFTFQDDEKLYFGL 109
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA;
HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Length = 437
Score = 63.6 bits (155), Expect = 3e-10
Identities = 25/106 (23%), Positives = 50/106 (47%), Gaps = 4/106 (3%)
Query: 796 DQYVFDIYSKYVPQPVDIKTSSV-YDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIP 854
++ + + P +K + + ++IL+ IG GAFG V + + +FA K +
Sbjct: 49 EKNILEYLEWAKPFTSKVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILN 108
Query: 855 VSHNLEK---ELIRKEIDIMNQLHHPKLINLHDAFEDDDEMVLIFE 897
L++ R+E D++ + LH AF+DD+ + L+ +
Sbjct: 109 KWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMD 154
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine
kinase, transferase; 1.80A {Rattus norvegicus} SCOP:
d.144.1.7 PDB: 3fpq_A
Length = 290
Score = 62.4 bits (152), Expect = 4e-10
Identities = 15/68 (22%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Query: 826 EEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKEL--IRKEIDIMNQLHHPKLINLH 883
EIG G+F V++ + +T A + + E ++E +++ L HP ++ +
Sbjct: 32 IEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFY 91
Query: 884 DAFEDDDE 891
D++E +
Sbjct: 92 DSWESTVK 99
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A
{Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A
2fh9_A 3mn3_A
Length = 275
Score = 62.2 bits (152), Expect = 4e-10
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 3/80 (3%)
Query: 821 HYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKEL---IRKEIDIMNQLHHP 877
+Y I++ +G G+F V TG A K I + ++ I +EI + L HP
Sbjct: 14 NYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 73
Query: 878 KLINLHDAFEDDDEMVLIFE 897
+I L+D + DE++++ E
Sbjct: 74 HIIKLYDVIKSKDEIIMVIE 93
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding,
nucleotide-binding, phosphoprotei
serine/threonine-protein kinase, transferase; 2.80A
{Schizosaccharomyces pombe}
Length = 336
Score = 62.7 bits (153), Expect = 4e-10
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Query: 821 HYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKEL---IRKEIDIMNQLHHP 877
Y I E +G G+FG V KT A KFI + ++ + +EI + L HP
Sbjct: 10 PYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHP 69
Query: 878 KLINLHDAFEDDDEMVLIFE 897
+I L+D ++V++ E
Sbjct: 70 HIIKLYDVITTPTDIVMVIE 89
>1x5a_A Ephrin type-A receptor 1; tyrosine-protein kinase receptor, ESK,
fibronectin type III (FN3) domain, structural genomics,
NPPSFA; NMR {Mus musculus} SCOP: b.1.2.1
Length = 107
Score = 57.5 bits (139), Expect = 5e-10
Identities = 14/82 (17%), Positives = 22/82 (26%), Gaps = 4/82 (4%)
Query: 1231 PSPPQGPLDVSDITPESCSLSWKPPLDDGGSPITNYVVEKYESATGFWSKLSSFVRSPAY 1290
S L + P L+W +Y + + V P
Sbjct: 9 ESLSGLSLKLVKKEPRQLELTWAGSRPRNPGGNLSYELHVLNQD----EEWHQMVLEPRV 64
Query: 1291 DVFGLETNRQYRFRVRAENQYG 1312
+ L+ + Y RVR G
Sbjct: 65 LLTKLQPDTTYIVRVRTLTPLG 86
Score = 54.0 bits (130), Expect = 1e-08
Identities = 15/95 (15%), Positives = 21/95 (22%), Gaps = 3/95 (3%)
Query: 670 PDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSWIRVGNTRFTTMAI 729
+ L L W +Y + V R +
Sbjct: 10 SLSGLSLKLVKKEPRQLELTWAGSRPRNPGGNLSYELHVLNQDEEWHQMVLEPRVL---L 66
Query: 730 TGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKD 764
T L P Y RV G S + T+
Sbjct: 67 TKLQPDTTYIVRVRTLTPLGPGPFSPDHEFRTSPP 101
Score = 50.9 bits (122), Expect = 1e-07
Identities = 11/89 (12%), Positives = 22/89 (24%), Gaps = 4/89 (4%)
Query: 274 TGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHD 333
+G L + + L W + Y + + +
Sbjct: 6 SGAESLSGLSLKLVKKEPRQLELTWAGSRPRNPGGNLSYELHVLNQDEEWHQMVLEP--- 62
Query: 334 TTFIVQGLTEGQEYLFHVMAVNENGMGPP 362
++ L Y+ V + G GP
Sbjct: 63 -RVLLTKLQPDTTYIVRVRTLTPLGPGPF 90
Score = 50.9 bits (122), Expect = 1e-07
Identities = 11/89 (12%), Positives = 22/89 (24%), Gaps = 4/89 (4%)
Query: 1881 TGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHD 1940
+G L + + L W + Y + + +
Sbjct: 6 SGAESLSGLSLKLVKKEPRQLELTWAGSRPRNPGGNLSYELHVLNQDEEWHQMVLEP--- 62
Query: 1941 TTFIVQGLTEGQEYLFHVMAVNENGMGPP 1969
++ L Y+ V + G GP
Sbjct: 63 -RVLLTKLQPDTTYIVRVRTLTPLGPGPF 90
Score = 48.6 bits (116), Expect = 8e-07
Identities = 15/81 (18%), Positives = 24/81 (29%), Gaps = 4/81 (4%)
Query: 902 PHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTKVSSYVTTPFVR 961
+L + L L W R +Y + + + + V P V
Sbjct: 10 SLSGLSLKLVKKEPRQLELTWAGSRPRNPGGNLSYELHVLNQDE----EWHQMVLEPRVL 65
Query: 962 VRNLAIGSTYEFRVMAENQYG 982
+ L +TY RV G
Sbjct: 66 LTKLQPDTTYIVRVRTLTPLG 86
Score = 47.5 bits (113), Expect = 2e-06
Identities = 14/97 (14%), Positives = 27/97 (27%), Gaps = 9/97 (9%)
Query: 378 PSPPGIPV-VTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQ 436
S G+ + + + + L+W Y + + Q V +
Sbjct: 9 ESLSGLSLKLVKKEPRQLELTWAGSRPRNPGGNLSYELHVLNQDEEWHQMVL-----EPR 63
Query: 437 INIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIK 473
+ + L Y RV G P S + +
Sbjct: 64 VLLTKLQPDTTYIVRVRTLTPLG---PGPFSPDHEFR 97
Score = 47.5 bits (113), Expect = 2e-06
Identities = 14/97 (14%), Positives = 27/97 (27%), Gaps = 9/97 (9%)
Query: 1985 PSPPGIPV-VTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQ 2043
S G+ + + + + L+W Y + + Q V +
Sbjct: 9 ESLSGLSLKLVKKEPRQLELTWAGSRPRNPGGNLSYELHVLNQDEEWHQMVL-----EPR 63
Query: 2044 INIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIK 2080
+ + L Y RV G P S + +
Sbjct: 64 VLLTKLQPDTTYIVRVRTLTPLG---PGPFSPDHEFR 97
Score = 47.5 bits (113), Expect = 2e-06
Identities = 14/128 (10%), Positives = 29/128 (22%), Gaps = 42/128 (32%)
Query: 1003 GAPGAPKGVD-----STEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIP 1057
+ G+ + L W+ R Y + ++ +
Sbjct: 6 SGAESLSGLSLKLVKKEPRQLELTWAGSRPRNPGGNLSYELHVLNQDEEWH-----QMVL 60
Query: 1058 DTSLKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQG 1117
+ + +T L + Y RV + G G
Sbjct: 61 EPRV--------------------------------LLTKLQPDTTYIVRVRTLTPLGPG 88
Query: 1118 PWSSSSDI 1125
P+S +
Sbjct: 89 PFSPDHEF 96
Score = 30.9 bits (70), Expect = 1.2
Identities = 15/130 (11%), Positives = 28/130 (21%), Gaps = 50/130 (38%)
Query: 1552 ASLTSKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKY 1611
+ L+ K V + L W+ R Y
Sbjct: 12 SGLSLKLVKKEPRQLELTWAGSRPRNPGGNLSY--------------------------E 45
Query: 1612 VLWVSEGKSIGSERGSTAQFLEREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIA 1671
+ +++ + VLE + L Y R+
Sbjct: 46 LHVLNQDEE------------------------WHQMVLEPRVLLTKLQPDTTYIVRVRT 81
Query: 1672 VNAIGKSEPS 1681
+ +G S
Sbjct: 82 LTPLGPGPFS 91
Score = 30.1 bits (68), Expect = 2.0
Identities = 9/53 (16%), Positives = 14/53 (26%), Gaps = 5/53 (9%)
Query: 22 YIIERREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPS 74
Y + VLE + L Y R+ + +G S
Sbjct: 44 YELHVLNQDEEWH-----QMVLEPRVLLTKLQPDTTYIVRVRTLTPLGPGPFS 91
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2;
ATP-binding, cholesterol biosynthesis, fatty acid
biosynthesis;kinase, lipid synthesis; 1.85A {Homo
sapiens} PDB: 3aqv_A* 2yza_A*
Length = 276
Score = 61.5 bits (150), Expect = 6e-10
Identities = 19/80 (23%), Positives = 35/80 (43%), Gaps = 3/80 (3%)
Query: 821 HYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKEL---IRKEIDIMNQLHHP 877
HY + + +G G FG V + TG+ A K + ++ I++EI + HP
Sbjct: 12 HYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHP 71
Query: 878 KLINLHDAFEDDDEMVLIFE 897
+I L+ + ++ E
Sbjct: 72 HIIKLYQVISTPTDFFMVME 91
>3qt2_A Interleukin-5 receptor subunit alpha; cytokine type I receptor
fold, fibronectin type III modules, helical bundle,
cytokine, ligand-receptor complex; HET: BGC; 2.55A {Homo
sapiens}
Length = 317
Score = 62.2 bits (150), Expect = 6e-10
Identities = 40/307 (13%), Positives = 81/307 (26%), Gaps = 29/307 (9%)
Query: 670 PDPPQFPTVEDIGHDSLALVWRAP-IWDGGSNITNYIVEKREHPMSSWIRVGNTRFTTMA 728
PP T++ G + L W+ + + Y V+ +
Sbjct: 12 LLPPVNFTIKVTGLAQVLLQWKPNPDQEQRNVNLEYQVKINAPKEDDYETRITESKA--- 68
Query: 729 ITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKDTFKKQIKKRQYDFDETGKKIRGKA 788
+T L G R +N D S + + + + T +
Sbjct: 69 VTILHMGFSASVRTILQN-----DHSLLASSWASAELHAPPGSPGTSIVNLTCTTNTTED 123
Query: 789 DEKVSDYDQYVFDIYSKYVPQPVDIKTSSVYDHYDILEEIGTGAFGVVHRCRERKTGNIF 848
+ Q + +Y Y E + T
Sbjct: 124 NYSRLRSYQVSLHCTWMVGTDAPEDTQYFLYYRYGSWTEE--------CQEYSMDTLGRN 175
Query: 849 AAKFIPVSHNLEKELIRKEIDIMNQLHHPKLINLHDAFEDDDEMVLIFEVLDRPHPPENL 908
A + P + L K + + H + + + +D+ +PP N+
Sbjct: 176 IACWFPRTFILSKGRDWLAVLVNGSSKHSAIRP--------FDQLFALHAIDQINPPLNV 227
Query: 909 HADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTKVSSYVTTPFVRVRNLAIG 968
A E G +++ W P +Y V+ + + + +
Sbjct: 228 TA-EIEGTRMSIQWEKPVSAFPIHCFDYEVKIHNTRNGYLQIEKLMTNA---FISIIDDL 283
Query: 969 STYEFRV 975
S Y+ +V
Sbjct: 284 SKYDVQV 290
Score = 57.6 bits (138), Expect = 2e-08
Identities = 37/272 (13%), Positives = 81/272 (29%), Gaps = 32/272 (11%)
Query: 196 PEGDNTKVKIFY------AGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKE 249
P+ + V + Y + E +T++ V F +V ++
Sbjct: 36 PDQEQRNVNLEYQVKINAPKEDDYETRITESKAVTILHMGFSASVRT-----ILQNDHSL 90
Query: 250 DAGDYTVNLSNSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKV 309
A + ++ GT +N+T + + W +
Sbjct: 91 LASSWASAELHAPPGSPGTSIVNLTCTTNTTEDNYSRLRSYQVSLHCTWMVGT--DAPED 148
Query: 310 THYVVERRDIS----MPHWIC----ISTTCH-DTTFIVQGLTEGQEYLFHVMAVNENGMG 360
T Y + R S + + C TFI+ V +++
Sbjct: 149 TQYFLYYRYGSWTEECQEYSMDTLGRNIACWFPRTFILSKGR--DWLAVLVNGSSKHSAI 206
Query: 361 PPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVG 420
P + + + D+ +PP G +++ W+KP+ Y + H
Sbjct: 207 RPFDQLFAL---HAIDQINPPLNVTAEIEGTR-MSIQWEKPVSAFPIHCFDYEVKIHNTR 262
Query: 421 SDAWQRVNVAICAPSQINIPNLIEGRQYEFRV 452
+ Q + + I + + +Y+ +V
Sbjct: 263 NGYLQIEKL----MTNAFISIIDDLSKYDVQV 290
Score = 57.6 bits (138), Expect = 2e-08
Identities = 37/272 (13%), Positives = 81/272 (29%), Gaps = 32/272 (11%)
Query: 1803 PEGDNTKVKIFY------AGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKE 1856
P+ + V + Y + E +T++ V F +V ++
Sbjct: 36 PDQEQRNVNLEYQVKINAPKEDDYETRITESKAVTILHMGFSASVRT-----ILQNDHSL 90
Query: 1857 DAGDYTVNLSNSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKV 1916
A + ++ GT +N+T + + W +
Sbjct: 91 LASSWASAELHAPPGSPGTSIVNLTCTTNTTEDNYSRLRSYQVSLHCTWMVGT--DAPED 148
Query: 1917 THYVVERRDIS----MPHWIC----ISTTCH-DTTFIVQGLTEGQEYLFHVMAVNENGMG 1967
T Y + R S + + C TFI+ V +++
Sbjct: 149 TQYFLYYRYGSWTEECQEYSMDTLGRNIACWFPRTFILSKGR--DWLAVLVNGSSKHSAI 206
Query: 1968 PPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVG 2027
P + + + D+ +PP G +++ W+KP+ Y + H
Sbjct: 207 RPFDQLFAL---HAIDQINPPLNVTAEIEGTR-MSIQWEKPVSAFPIHCFDYEVKIHNTR 262
Query: 2028 SDAWQRVNVAICAPSQINIPNLIEGRQYEFRV 2059
+ Q + + I + + +Y+ +V
Sbjct: 263 NGYLQIEKL----MTNAFISIIDDLSKYDVQV 290
Score = 48.7 bits (115), Expect = 1e-05
Identities = 15/99 (15%), Positives = 32/99 (32%), Gaps = 6/99 (6%)
Query: 647 YRVVAENDLGM---DSAIVKIQISDRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITN 703
V + + + D+ +PP T E I +++ W P+ + +
Sbjct: 195 VLVNGSSKHSAIRPFDQLFALHAIDQINPPLNVTAE-IEGTRMSIQWEKPVSAFPIHCFD 253
Query: 704 YIVEKREHPMSSWIRVGNTRFTTMAITGLSPGHQYEFRV 742
Y V+ T I+ + +Y+ +V
Sbjct: 254 YEVKIHNTRNGYLQIEKLM--TNAFISIIDDLSKYDVQV 290
Score = 46.0 bits (108), Expect = 7e-05
Identities = 30/247 (12%), Positives = 55/247 (22%), Gaps = 43/247 (17%)
Query: 904 PPENLHADEFAGDSLTLYWTPPRDNGGSEIT-NYVVEKKDYNSTVWTKVSSYVTTPFVRV 962
PP N + L W P D + Y V+ + T V
Sbjct: 14 PPVNFTIKVTGLAQVLLQWKPNPDQEQRNVNLEYQVKINAPKEDDYET----RITESKAV 69
Query: 963 RNLAIGSTYEFRVMAENQYGLSKPALTIDPIKAKHPFDVPGAP----------GAPKGVD 1012
L +G + R + +N + L + + P PG
Sbjct: 70 TILHMGFSASVRTILQNDHSLLASSWA--SAELHAPPGSPGTSIVNLTCTTNTTEDNYSR 127
Query: 1013 STEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEGKS 1072
+SL + +Y + R S + + S+ + G++
Sbjct: 128 LRSYQVSLHCTWMVGTDAPEDTQYFLYYRYGSWTEE-------CQEYSMD-----TLGRN 175
Query: 1073 IGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPWSSSSDIIMCCAPP 1132
I + P V + +
Sbjct: 176 IAC--------------WFPRTFILSKGRDWLAVLVNGSSKHSAIRPFDQLFALHAIDQI 221
Query: 1133 CAPKITS 1139
P +
Sbjct: 222 NPPLNVT 228
Score = 45.6 bits (107), Expect = 1e-04
Identities = 31/277 (11%), Positives = 78/277 (28%), Gaps = 31/277 (11%)
Query: 1047 KWIKASMAHIPDTSLKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEF 1106
+W + +L+Y + ++ K E T VT L
Sbjct: 31 QWKPNPDQEQRNVNLEYQVKINAPKEDDYETRITESK----------AVTILHMGFSASV 80
Query: 1107 RVCAVNAAGQGP--WSSSSDIIMCCAPPCAPKI---TSDLSIRDMTVLAGEEFTITVPFS 1161
R N W+S+ +P + T++ + + + L + ++ +
Sbjct: 81 RTILQNDHSLLASSWASAELHAPPGSPGTSIVNLTCTTNTTEDNYSRLRSYQVSLHCTWM 140
Query: 1162 GRPKPTPI------WTVNGDEVSPDGRIKFETSENQTIYRNKSAKRATDSGSYTIQLVNT 1215
+ N + ++ + + + +
Sbjct: 141 VGTDAPEDTQYFLYYRYGSWTEECQEYSMDTLGRNIACWFPRTFILSKGRDWLAVLVNGS 200
Query: 1216 VG-----SDSASCKVYVVDKPSPPQGPLDVSDITPESCSLSWKPPLDDGGSPITNYVVEK 1270
++ +D+ +PP + I S+ W+ P+ +Y V+
Sbjct: 201 SKHSAIRPFDQLFALHAIDQINPPLN-VTAE-IEGTRMSIQWEKPVSAFPIHCFDYEVKI 258
Query: 1271 YESATGFWSKLSSFVRSPAYDVFGLETNRQYRFRVRA 1307
+ + G+ + ++ +Y +VRA
Sbjct: 259 HNTRNGYLQIEKLMTN---AFISIIDDLSKYDVQVRA 292
Score = 44.5 bits (104), Expect = 3e-04
Identities = 24/183 (13%), Positives = 44/183 (24%), Gaps = 21/183 (11%)
Query: 1230 KPSPPQGPLDVSDITPESCSLSWKPPLDDGGSPIT-NYVVEKYESATGFWSKLSSFVRSP 1288
PP + L WKP D + Y V+ + +
Sbjct: 11 SLLPPVN-FTIKVTGLAQVLLQWKPNPDQEQRNVNLEYQVKINAPKEDDYET----RITE 65
Query: 1289 AYDVFGLETNRQYRFRVRAENQYGVSEPLELDNSITAKFPFTVPDPPGQPQIVDWDTNNA 1348
+ V L R +N + + +A+ P N
Sbjct: 66 SKAVTILHMGFSASVRTILQNDHSLLASSW----ASAELHAPPGSPGTSIV-------NL 114
Query: 1349 TLMWDRPRTDGGSKIQGYKML----LKTPTGELPTTIWSKIRPTSSTVYCKDTTMNSSNS 1404
T + + L + T + R S T C++ +M++
Sbjct: 115 TCTTNTTEDNYSRLRSYQVSLHCTWMVGTDAPEDTQYFLYYRYGSWTEECQEYSMDTLGR 174
Query: 1405 EPG 1407
Sbjct: 175 NIA 177
Score = 40.6 bits (94), Expect = 0.004
Identities = 20/143 (13%), Positives = 36/143 (25%), Gaps = 11/143 (7%)
Query: 377 KPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQ-GYWIDKHEVGSDAWQRVNVAICAPS 435
PP + G V L W D + Y + + D ++
Sbjct: 11 SLLPPVNFTIKVTGLAQVLLQWKPNPDQEQRNVNLEYQVKINAPKEDDYETRIT-----E 65
Query: 436 QINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQN 495
+ L G R QN+ L S AS + + +
Sbjct: 66 SKAVTILHMGFSASVRTILQNDHSLLASSWASAELHAPPGSPGTSIVNL-----TCTTNT 120
Query: 496 HNAQFQCTITGCPKPTISWLKGS 518
+ + +W+ G+
Sbjct: 121 TEDNYSRLRSYQVSLHCTWMVGT 143
Score = 40.6 bits (94), Expect = 0.004
Identities = 20/143 (13%), Positives = 36/143 (25%), Gaps = 11/143 (7%)
Query: 1984 KPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQ-GYWIDKHEVGSDAWQRVNVAICAPS 2042
PP + G V L W D + Y + + D ++
Sbjct: 11 SLLPPVNFTIKVTGLAQVLLQWKPNPDQEQRNVNLEYQVKINAPKEDDYETRIT-----E 65
Query: 2043 QINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQN 2102
+ L G R QN+ L S AS + + +
Sbjct: 66 SKAVTILHMGFSASVRTILQNDHSLLASSWASAELHAPPGSPGTSIVNL-----TCTTNT 120
Query: 2103 HNAQFQCTITGCPKPTISWLKGS 2125
+ + +W+ G+
Sbjct: 121 TEDNYSRLRSYQVSLHCTWMVGT 143
Score = 38.7 bits (89), Expect = 0.018
Identities = 34/229 (14%), Positives = 60/229 (26%), Gaps = 52/229 (22%)
Query: 902 PHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNST------VWTKVSSYV 955
+N SL W D E T Y + + + T + +
Sbjct: 119 NTTEDNYSRLRSYQVSLHCTWMVGTD--APEDTQYFLYYRYGSWTEECQEYSMDTLGRNI 176
Query: 956 TTPFVRVRNLAIGS-TYEFRVMAENQYGLSKPALTIDPIKAKHPFDVPGAPGAPKGVDST 1014
F R L+ G V +++ +P D + A H D P +
Sbjct: 177 ACWFPRTFILSKGRDWLAVLVNGSSKHSAIRPF---DQLFALHAIDQINPPLNVT-AEIE 232
Query: 1015 EDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEGKSIG 1074
+S+ W KP Y V+ + I +
Sbjct: 233 GTRMSIQWEKPVSAFPIHCFDYEVKIHNTRNGYL------QIEKLMTNAFI--------- 277
Query: 1075 SERGSTAQFLELLLMFIPNRVTSLIENHEYEFRV-CAVNA--AGQGPWS 1120
+ + + +Y+ +V AV++ G WS
Sbjct: 278 ---------------------SIIDDLSKYDVQVRAAVSSMCREAGLWS 305
Score = 36.4 bits (83), Expect = 0.10
Identities = 23/244 (9%), Positives = 48/244 (19%), Gaps = 26/244 (10%)
Query: 268 TFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVT-HYVVERRDISMPHWIC 326
+ PP+ + L W P V Y V+ +
Sbjct: 3 DLLPDEKISLLPPVN-FTIKVTGLAQVLLQWKPNPDQEQRNVNLEYQVKINAPKEDDYET 61
Query: 327 ISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGP--PLEGINPIKAKSPYDKP------ 378
T T L G + N++ + SP
Sbjct: 62 RITESKAVT----ILHMGFSASVRTILQNDHSLLASSWASAELHAPPGSPGTSIVNLTCT 117
Query: 379 --SPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSD------AWQRVNVA 430
+ + ++ +W D Y++ + +
Sbjct: 118 TNTTEDNYSRLRSYQVSLHCTWMVGTD--APEDTQYFLYYRYGSWTEECQEYSMDTLGRN 175
Query: 431 ICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNA 490
I V ++ P ++ D + P +
Sbjct: 176 IACWFPRTFILSKGRDWLAVLVNGSSKHSAIRPFDQLFALHAIDQIN--PPLNVTAEIEG 233
Query: 491 NAIQ 494
+
Sbjct: 234 TRMS 237
Score = 36.4 bits (83), Expect = 0.10
Identities = 23/244 (9%), Positives = 48/244 (19%), Gaps = 26/244 (10%)
Query: 1875 TFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVT-HYVVERRDISMPHWIC 1933
+ PP+ + L W P V Y V+ +
Sbjct: 3 DLLPDEKISLLPPVN-FTIKVTGLAQVLLQWKPNPDQEQRNVNLEYQVKINAPKEDDYET 61
Query: 1934 ISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGP--PLEGINPIKAKSPYDKP------ 1985
T T L G + N++ + SP
Sbjct: 62 RITESKAVT----ILHMGFSASVRTILQNDHSLLASSWASAELHAPPGSPGTSIVNLTCT 117
Query: 1986 --SPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSD------AWQRVNVA 2037
+ + ++ +W D Y++ + +
Sbjct: 118 TNTTEDNYSRLRSYQVSLHCTWMVGTD--APEDTQYFLYYRYGSWTEECQEYSMDTLGRN 175
Query: 2038 ICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNA 2097
I V ++ P ++ D + P +
Sbjct: 176 IACWFPRTFILSKGRDWLAVLVNGSSKHSAIRPFDQLFALHAIDQIN--PPLNVTAEIEG 233
Query: 2098 NAIQ 2101
+
Sbjct: 234 TRMS 237
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU;
CAMP-dependent protein kinase,catalytic mechanism, ATP
hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A
{Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E*
1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A*
1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A*
3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Length = 350
Score = 61.9 bits (151), Expect = 8e-10
Identities = 23/117 (19%), Positives = 54/117 (46%), Gaps = 6/117 (5%)
Query: 786 GKADEKVSDYDQYVFDIYSKYVPQPVDIKTSSV-YDHYDILEEIGTGAFGVVHRCRERKT 844
K + +++ ++ + ++ D +D ++ +GTG+FG V + +++
Sbjct: 6 AKKGSEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKES 65
Query: 845 GNIFAAKFIPVSHNLEK---ELIRKEIDIMNQLHHPKLINLHDAFEDDDE--MVLIF 896
GN +A K + ++ E E I+ ++ P L+ L +F+D+ MV+ +
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
>2ed9_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal
cancer suppressor, structural genomics, NPPSFA; NMR
{Homo sapiens}
Length = 124
Score = 57.7 bits (140), Expect = 8e-10
Identities = 29/118 (24%), Positives = 43/118 (36%), Gaps = 9/118 (7%)
Query: 351 VMAVNENGMGPPLEGINPIKAKSPYDKPS-PPGIPVVTQVGGDFVNLSWDKPLDDG--GS 407
+ N G G + I + D PS PP + V + +SW P G
Sbjct: 4 GSSGNRYGPGVSTD---DITVVTLSDVPSAPPQNVSLEVVNSRSIKVSWLPPPSGTQNG- 59
Query: 408 RIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSS 465
I GY I +H + + + + L +G QY F+V A G PS+
Sbjct: 60 FITGYKI-RHRKTTRRGEMETLEPNNLWYL-FTGLEKGSQYSFQVSAMTVNGTGPPSN 115
Score = 57.7 bits (140), Expect = 8e-10
Identities = 29/118 (24%), Positives = 43/118 (36%), Gaps = 9/118 (7%)
Query: 1958 VMAVNENGMGPPLEGINPIKAKSPYDKPS-PPGIPVVTQVGGDFVNLSWDKPLDDG--GS 2014
+ N G G + I + D PS PP + V + +SW P G
Sbjct: 4 GSSGNRYGPGVSTD---DITVVTLSDVPSAPPQNVSLEVVNSRSIKVSWLPPPSGTQNG- 59
Query: 2015 RIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSS 2072
I GY I +H + + + + L +G QY F+V A G PS+
Sbjct: 60 FITGYKI-RHRKTTRRGEMETLEPNNLWYL-FTGLEKGSQYSFQVSAMTVNGTGPPSN 115
Score = 53.1 bits (128), Expect = 3e-08
Identities = 31/122 (25%), Positives = 47/122 (38%), Gaps = 7/122 (5%)
Query: 649 VVAENDLGM--DSAIVKIQ-ISDRPD-PPQFPTVEDIGHDSLALVWRAPIWDGGSN--IT 702
+ N G + + + +SD P PPQ ++E + S+ + W P N IT
Sbjct: 4 GSSGNRYGPGVSTDDITVVTLSDVPSAPPQNVSLEVVNSRSIKVSWLPPPSGT-QNGFIT 62
Query: 703 NYIVEKREHPMSSWIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITT 762
Y + R+ + TGL G QY F+V A V G PS T
Sbjct: 63 GYKIRHRKTTRRGEMETLEPNNLWYLFTGLEKGSQYSFQVSAMTVNGTGPPSNWYTAETP 122
Query: 763 KD 764
++
Sbjct: 123 EN 124
Score = 48.1 bits (115), Expect = 2e-06
Identities = 30/114 (26%), Positives = 43/114 (37%), Gaps = 9/114 (7%)
Query: 1209 TIQLVNTVGS--DSASCKVYVV-DKPS-PPQGPLDVSDITPESCSLSWKPPLDDG--GSP 1262
+ N G + V + D PS PPQ + + + S +SW PP G
Sbjct: 3 SGSSGNRYGPGVSTDDITVVTLSDVPSAPPQN-VSLEVVNSRSIKVSWLPPPSGTQNG-F 60
Query: 1263 ITNYVVEKYESATGFWSKLSSFVRSPAYDVFGLETNRQYRFRVRAENQYGVSEP 1316
IT Y + ++ T + + Y GLE QY F+V A G P
Sbjct: 61 ITGYKI-RHRKTTRRGEMETLEPNNLWYLFTGLEKGSQYSFQVSAMTVNGTGPP 113
Score = 46.9 bits (112), Expect = 5e-06
Identities = 26/114 (22%), Positives = 44/114 (38%), Gaps = 9/114 (7%)
Query: 255 TVNLSNSSGSVSGTFTINITGLPGPPIGP---LDVSEITKHTCTLHWNPPKYDG--GLKV 309
+ + N G T I + L P P + + + + + W PP G +
Sbjct: 3 SGSSGNRYGPGVSTDDITVVTLSDVPSAPPQNVSLEVVNSRSIKVSWLPPPSGTQNG-FI 61
Query: 310 THYVVE-RRDISMPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPP 362
T Y + R+ + + ++ GL +G +Y F V A+ NG GPP
Sbjct: 62 TGYKIRHRKTTRRGEMETLEPN--NLWYLFTGLEKGSQYSFQVSAMTVNGTGPP 113
Score = 46.9 bits (112), Expect = 5e-06
Identities = 26/114 (22%), Positives = 44/114 (38%), Gaps = 9/114 (7%)
Query: 1862 TVNLSNSSGSVSGTFTINITGLPGPPIGP---LDVSEITKHTCTLHWNPPKYDG--GLKV 1916
+ + N G T I + L P P + + + + + W PP G +
Sbjct: 3 SGSSGNRYGPGVSTDDITVVTLSDVPSAPPQNVSLEVVNSRSIKVSWLPPPSGTQNG-FI 61
Query: 1917 THYVVE-RRDISMPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPP 1969
T Y + R+ + + ++ GL +G +Y F V A+ NG GPP
Sbjct: 62 TGYKIRHRKTTRRGEMETLEPN--NLWYLFTGLEKGSQYSFQVSAMTVNGTGPP 113
Score = 40.8 bits (96), Expect = 6e-04
Identities = 20/82 (24%), Positives = 31/82 (37%), Gaps = 6/82 (7%)
Query: 904 PPENLHADEFAGDSLTLYWTPP---RDNGGSEITNYVVEKKDYNSTVWTKVSSYVTTPFV 960
PP+N+ + S+ + W PP NG IT Y + + + + +
Sbjct: 31 PPQNVSLEVVNSRSIKVSWLPPPSGTQNG--FITGYKIRHRK-TTRRGEMETLEPNNLWY 87
Query: 961 RVRNLAIGSTYEFRVMAENQYG 982
L GS Y F+V A G
Sbjct: 88 LFTGLEKGSQYSFQVSAMTVNG 109
Score = 40.4 bits (95), Expect = 8e-04
Identities = 27/151 (17%), Positives = 42/151 (27%), Gaps = 43/151 (28%)
Query: 975 VMAENQYGLSKPALTIDPIKAKHPFDVP-GAPGAPKGVDSTEDSISLVWSKP---RHDGG 1030
+ N+YG D I DVP P SI + W P +G
Sbjct: 4 GSSGNRYGPGVST---DDITVVTLSDVPSAPPQNVSLEVVNSRSIKVSWLPPPSGTQNG- 59
Query: 1031 SPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEGKSIGSERGSTAQFLELLLMF 1090
I Y + + + + + +L
Sbjct: 60 -FITGYKI------------------------RHRKTTRRGEMETLEPNNLWYL------ 88
Query: 1091 IPNRVTSLIENHEYEFRVCAVNAAGQGPWSS 1121
T L + +Y F+V A+ G GP S+
Sbjct: 89 ----FTGLEKGSQYSFQVSAMTVNGTGPPSN 115
Score = 29.2 bits (66), Expect = 6.0
Identities = 9/37 (24%), Positives = 15/37 (40%), Gaps = 3/37 (8%)
Query: 46 SFSVLNLVEGNDYEFRIIAVNAIG---KSEPSICTTP 79
+ L +G+ Y F++ A+ G S TP
Sbjct: 86 WYLFTGLEKGSQYSFQVSAMTVNGTGPPSNWYTAETP 122
Score = 29.2 bits (66), Expect = 6.0
Identities = 9/37 (24%), Positives = 15/37 (40%), Gaps = 3/37 (8%)
Query: 1653 SFSVLNLVEGNDYEFRIIAVNAIG---KSEPSICTTP 1686
+ L +G+ Y F++ A+ G S TP
Sbjct: 86 WYLFTGLEKGSQYSFQVSAMTVNGTGPPSNWYTAETP 122
>4doh_B Interleukin-20 receptor subunit beta; IL10 family cytokine receptor
complex, alpha helical cytokin beta sandwhich receptor
fold, signaling complex; HET: NAG; 2.80A {Homo sapiens}
Length = 206
Score = 59.7 bits (144), Expect = 9e-10
Identities = 26/173 (15%), Positives = 47/173 (27%), Gaps = 21/173 (12%)
Query: 295 TLHWNPPKYDGGLKVTHYVVE-----RRDISMPHWICISTTCHDTTF----IVQGLTEGQ 345
L W+P G +Y VE + WI S C T + +T
Sbjct: 23 LLMWSPVIAPGE--TVYYSVEYQGEYESLYTSHIWIPSSW-CSLTEGPECDVTDDITATV 79
Query: 346 EYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDG 405
Y V A + +P + PG+ + + L P
Sbjct: 80 PYNLRVRATLGSQTSAWSILKHPFN--RQSTILTRPGMEITKDGFHLVIELEDLGP---- 133
Query: 406 GSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEA 458
+ + A + V + +++ + G Y + +A
Sbjct: 134 ---QFEFLVAYWRREPGAEEHVKMVRSGGIPVHLETMEPGAAYCVKAQTFVKA 183
Score = 59.7 bits (144), Expect = 9e-10
Identities = 26/173 (15%), Positives = 47/173 (27%), Gaps = 21/173 (12%)
Query: 1902 TLHWNPPKYDGGLKVTHYVVE-----RRDISMPHWICISTTCHDTTF----IVQGLTEGQ 1952
L W+P G +Y VE + WI S C T + +T
Sbjct: 23 LLMWSPVIAPGE--TVYYSVEYQGEYESLYTSHIWIPSSW-CSLTEGPECDVTDDITATV 79
Query: 1953 EYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDG 2012
Y V A + +P + PG+ + + L P
Sbjct: 80 PYNLRVRATLGSQTSAWSILKHPFN--RQSTILTRPGMEITKDGFHLVIELEDLGP---- 133
Query: 2013 GSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEA 2065
+ + A + V + +++ + G Y + +A
Sbjct: 134 ---QFEFLVAYWRREPGAEEHVKMVRSGGIPVHLETMEPGAAYCVKAQTFVKA 183
Score = 58.9 bits (142), Expect = 2e-09
Identities = 38/227 (16%), Positives = 59/227 (25%), Gaps = 54/227 (23%)
Query: 904 PPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVE-----KKDYNSTVWTKVS--SYVT 956
P+ L L W+P G E Y VE + Y S +W S S
Sbjct: 9 APQQLSVLST-NMKHLLMWSPVIAPG--ETVYYSVEYQGEYESLYTSHIWIPSSWCSLTE 65
Query: 957 TPFVRV-RNLAIGSTYEFRVMAENQYGLSKPALTIDPIKAKHPFDVPGAPGAPKGVDSTE 1015
P V ++ Y RV A S ++ KHPF+ G++ T+
Sbjct: 66 GPECDVTDDITATVPYNLRVRATLGSQTSAWSIL------KHPFNRQSTILTRPGMEITK 119
Query: 1016 DSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEGKSIGS 1075
D LV D G + ++V M +
Sbjct: 120 DGFHLVIE--LEDLGPQFE-FLVAYWRREPGAEEHVKMVRSGGIPV-------------- 162
Query: 1076 ERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAA--GQGPWS 1120
+ ++ Y + A +S
Sbjct: 163 ------------------HLETMEPGAAYCVKAQTFVKAIGRYSAFS 191
Score = 42.0 bits (98), Expect = 8e-04
Identities = 33/188 (17%), Positives = 46/188 (24%), Gaps = 27/188 (14%)
Query: 1250 LSWKPPLDDGGSPITNYVVE-----KYESATGFWSKLSSF--VRSPAYDV-FGLETNRQY 1301
L W P Y VE + + W S P DV + Y
Sbjct: 24 LMWSPV--IAPGETVYYSVEYQGEYESLYTSHIWIPSSWCSLTEGPECDVTDDITATVPY 81
Query: 1302 RFRVRAENQYGVSEPLELDNSITAKFPFTVPDPPGQPQIVDWDTNNATLMWDRPRTDGGS 1361
RVRA S L K PF ++ + L+ + D G
Sbjct: 82 NLRVRATLGSQTSAWSIL------KHPFNRQSTILTRPGMEITKDGFHLVIELE--DLGP 133
Query: 1362 KIQGYKMLLKTPTGELPTTIWSKIRPTS--------STVYC-KDTTMNSSNSEPGKQSGP 1412
+ + + G + YC K T + S
Sbjct: 134 QFEFLVAYWRREPGAEEHVKMVRSGGIPVHLETMEPGAAYCVKAQTFVKAIGRYSAFSQT 193
Query: 1413 VIVEEQPN 1420
VE Q
Sbjct: 194 ECVEVQGE 201
Score = 41.6 bits (97), Expect = 0.001
Identities = 17/124 (13%), Positives = 36/124 (29%), Gaps = 3/124 (2%)
Query: 648 RVVAENDLGMDSAIVKIQISDRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVE 707
RV A + + +R +I D LV G
Sbjct: 84 RVRATLGSQTSAWSILKHPFNRQSTILTRPGMEITKDGFHLVIELE-DLGPQFEFLVAYW 142
Query: 708 KREHPMSSWIRVGNTRFTTMAITGLSPGHQYEFRVYA--ENVYGRSDPSTTSDLITTKDT 765
+RE +++ + + + + PG Y + + + S S T + +
Sbjct: 143 RREPGAEEHVKMVRSGGIPVHLETMEPGAAYCVKAQTFVKAIGRYSAFSQTECVEVQGEA 202
Query: 766 FKKQ 769
+ +
Sbjct: 203 IEGR 206
Score = 41.6 bits (97), Expect = 0.001
Identities = 19/103 (18%), Positives = 28/103 (27%), Gaps = 12/103 (11%)
Query: 672 PPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVE-----KREHPMSSWIRVG---NTR 723
PQ +V + L+W Y VE + + WI T
Sbjct: 9 APQQLSVLST-NMKHLLMWSPV--IAPGETVYYSVEYQGEYESLYTSHIWIPSSWCSLTE 65
Query: 724 FTTMAIT-GLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKDT 765
+T ++ Y RV A S S + T
Sbjct: 66 GPECDVTDDITATVPYNLRVRATLGSQTSAWSILKHPFNRQST 108
Score = 31.6 bits (71), Expect = 1.9
Identities = 10/91 (10%), Positives = 22/91 (24%), Gaps = 9/91 (9%)
Query: 1218 SDSASCKVYVVDKPSPPQGPLDVSDITPESCSLSWKPPLDDGGSPITNYVVEKYESATGF 1277
S + P +IT + L + P ++V + G
Sbjct: 97 SILKHPFNRQSTILTRP-----GMEITKDGFHLVIELE---DLGPQFEFLVAYWRREPGA 148
Query: 1278 WSKLSSFV-RSPAYDVFGLETNRQYRFRVRA 1307
+ + +E Y + +
Sbjct: 149 EEHVKMVRSGGIPVHLETMEPGAAYCVKAQT 179
Score = 31.6 bits (71), Expect = 2.2
Identities = 13/60 (21%), Positives = 19/60 (31%), Gaps = 4/60 (6%)
Query: 1631 FLEREVGGAIWLK---CNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPSICTTPV 1687
E IW+ C+ EC + ++ Y R+ A S SI P
Sbjct: 45 EYESLYTSHIWIPSSWCSLTEGPECDVT-DDITATVPYNLRVRATLGSQTSAWSILKHPF 103
Score = 31.6 bits (71), Expect = 2.4
Identities = 10/44 (22%), Positives = 15/44 (34%), Gaps = 1/44 (2%)
Query: 37 CNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPSICTTPV 80
C+ EC + ++ Y R+ A S SI P
Sbjct: 61 CSLTEGPECDVT-DDITATVPYNLRVRATLGSQTSAWSILKHPF 103
Score = 30.0 bits (67), Expect = 6.0
Identities = 7/77 (9%), Positives = 16/77 (20%), Gaps = 7/77 (9%)
Query: 902 PHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTKVSSYVTTPF-V 960
+ G L + ++V V + V
Sbjct: 109 ILTRPGMEI-TKDGFHLVIELEDLGPQ-----FEFLVAYWRREPGAEEHVKMVRSGGIPV 162
Query: 961 RVRNLAIGSTYEFRVMA 977
+ + G+ Y +
Sbjct: 163 HLETMEPGAAYCVKAQT 179
>3mpc_A FN3-like protein; fibronectin, FN(III), unknown function; 1.60A
{Clostridium thermocellum}
Length = 103
Score = 56.6 bits (137), Expect = 1e-09
Identities = 18/90 (20%), Positives = 39/90 (43%), Gaps = 5/90 (5%)
Query: 1227 VVDKPSPPQGPLDVSDITPESCSLSWKPPLDDGGSPITNYVVEKYESATGFWSKLSSFVR 1286
+V P+ P G V D + + +L+W +Y V++ + G ++ +++ +
Sbjct: 1 MVSAPAFPTGLSAVLDSSGNTANLTWNAA-----PGANSYNVKRSTKSGGPYTTIATNIT 55
Query: 1287 SPAYDVFGLETNRQYRFRVRAENQYGVSEP 1316
S Y G+ T +Y + V A + +
Sbjct: 56 STNYTDTGVATGTKYYYVVSAVSNGVETLN 85
Score = 52.4 bits (126), Expect = 4e-08
Identities = 21/86 (24%), Positives = 32/86 (37%), Gaps = 5/86 (5%)
Query: 277 PGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHDTTF 336
P P G V + + +T L WN Y V+R S + I+T T +
Sbjct: 5 PAFPTGLSAVLDSSGNTANLTWNAAPG-----ANSYNVKRSTKSGGPYTTIATNITSTNY 59
Query: 337 IVQGLTEGQEYLFHVMAVNENGMGPP 362
G+ G +Y + V AV+
Sbjct: 60 TDTGVATGTKYYYVVSAVSNGVETLN 85
Score = 52.4 bits (126), Expect = 4e-08
Identities = 21/86 (24%), Positives = 32/86 (37%), Gaps = 5/86 (5%)
Query: 1884 PGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHDTTF 1943
P P G V + + +T L WN Y V+R S + I+T T +
Sbjct: 5 PAFPTGLSAVLDSSGNTANLTWNAAPG-----ANSYNVKRSTKSGGPYTTIATNITSTNY 59
Query: 1944 IVQGLTEGQEYLFHVMAVNENGMGPP 1969
G+ G +Y + V AV+
Sbjct: 60 TDTGVATGTKYYYVVSAVSNGVETLN 85
Score = 51.6 bits (124), Expect = 6e-08
Identities = 15/90 (16%), Positives = 34/90 (37%), Gaps = 6/90 (6%)
Query: 898 VLDRPHPPENLHADEFAGD-SLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTKVSSYVT 956
++ P P L A + + L W +Y V++ + +T +++ +T
Sbjct: 1 MVSAPAFPTGLSAVLDSSGNTANLTWNAA-----PGANSYNVKRSTKSGGPYTTIATNIT 55
Query: 957 TPFVRVRNLAIGSTYEFRVMAENQYGLSKP 986
+ +A G+ Y + V A + +
Sbjct: 56 STNYTDTGVATGTKYYYVVSAVSNGVETLN 85
Score = 50.9 bits (122), Expect = 1e-07
Identities = 21/95 (22%), Positives = 35/95 (36%), Gaps = 10/95 (10%)
Query: 672 PPQFPT----VEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSWIRVG-NTRFTT 726
P FPT V D ++ L W A +Y V++ + + N T
Sbjct: 4 APAFPTGLSAVLDSSGNTANLTWNAA-----PGANSYNVKRSTKSGGPYTTIATNITSTN 58
Query: 727 MAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLIT 761
TG++ G +Y + V A + + S + L
Sbjct: 59 YTDTGVATGTKYYYVVSAVSNGVETLNSAEAILQY 93
Score = 46.2 bits (110), Expect = 4e-06
Identities = 16/93 (17%), Positives = 34/93 (36%), Gaps = 7/93 (7%)
Query: 378 PSPP-GIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQ 436
P+ P G+ V G+ NL+W+ Y + + + + I + +
Sbjct: 5 PAFPTGLSAVLDSSGNTANLTWNAA-----PGANSYNVKRSTKSGGPYTTIATNITSTN- 58
Query: 437 INIPNLIEGRQYEFRVYAQNEAGLSLPSSASNS 469
+ G +Y + V A + +L S+ +
Sbjct: 59 YTDTGVATGTKYYYVVSAVSNGVETLNSAEAIL 91
Score = 46.2 bits (110), Expect = 4e-06
Identities = 16/93 (17%), Positives = 34/93 (36%), Gaps = 7/93 (7%)
Query: 1985 PSPP-GIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQ 2043
P+ P G+ V G+ NL+W+ Y + + + + I + +
Sbjct: 5 PAFPTGLSAVLDSSGNTANLTWNAA-----PGANSYNVKRSTKSGGPYTTIATNITSTN- 58
Query: 2044 INIPNLIEGRQYEFRVYAQNEAGLSLPSSASNS 2076
+ G +Y + V A + +L S+ +
Sbjct: 59 YTDTGVATGTKYYYVVSAVSNGVETLNSAEAIL 91
Score = 38.5 bits (90), Expect = 0.002
Identities = 11/62 (17%), Positives = 24/62 (38%), Gaps = 4/62 (6%)
Query: 22 YIIERREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPS---ICTT 78
Y ++R G + N+ +++ + G Y + + AV+ ++ S I
Sbjct: 35 YNVKRSTKSGGPYTTIAT-NITSTNYTDTGVATGTKYYYVVSAVSNGVETLNSAEAILQY 93
Query: 79 PV 80
P
Sbjct: 94 PK 95
Score = 37.0 bits (86), Expect = 0.009
Identities = 20/124 (16%), Positives = 37/124 (29%), Gaps = 42/124 (33%)
Query: 1004 APGAPKGV----DSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDT 1059
AP P G+ DS+ ++ +L W+ Y V++ S + + T
Sbjct: 4 APAFPTGLSAVLDSSGNTANLTWNAA-----PGANSYNVKRSTKSGGPYTTIA---TNIT 55
Query: 1060 SLKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPW 1119
S Y T + +Y + V AV+ +
Sbjct: 56 STNYT------------------------------DTGVATGTKYYYVVSAVSNGVETLN 85
Query: 1120 SSSS 1123
S+ +
Sbjct: 86 SAEA 89
Score = 35.1 bits (81), Expect = 0.043
Identities = 7/38 (18%), Positives = 16/38 (42%), Gaps = 3/38 (7%)
Query: 1653 SFSVLNLVEGNDYEFRIIAVNAIGKSEPS---ICTTPV 1687
+++ + G Y + + AV+ ++ S I P
Sbjct: 58 NYTDTGVATGTKYYYVVSAVSNGVETLNSAEAILQYPK 95
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein,
neurite growth regulation; HET: NAG BMA; 2.00A {Mus
musculus}
Length = 361
Score = 61.4 bits (149), Expect = 1e-09
Identities = 21/90 (23%), Positives = 32/90 (35%), Gaps = 3/90 (3%)
Query: 96 PLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREI-SSGARYRVETAGGVFRLHFNEVT 154
LG LT++C+ + K + ++ S G+ V G L F +V
Sbjct: 252 KESAWEAHLGDTLTIRCDTKQQGMTKVWVSPSNEQVLSQGSNGSVSVRNGD--LFFKKVQ 309
Query: 155 DVDNGDYTCEAYNSVGFAHTSSRVKIGTPP 184
D G YTC A S +K+
Sbjct: 310 VEDGGVYTCYAMGETFNETLSVELKVYNFT 339
Score = 61.4 bits (149), Expect = 1e-09
Identities = 21/90 (23%), Positives = 32/90 (35%), Gaps = 3/90 (3%)
Query: 1703 PLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREI-SSGARYRVETAGGVFRLHFNEVT 1761
LG LT++C+ + K + ++ S G+ V G L F +V
Sbjct: 252 KESAWEAHLGDTLTIRCDTKQQGMTKVWVSPSNEQVLSQGSNGSVSVRNGD--LFFKKVQ 309
Query: 1762 DVDNGDYTCEAYNSVGFAHTSSRVKIGTPP 1791
D G YTC A S +K+
Sbjct: 310 VEDGGVYTCYAMGETFNETLSVELKVYNFT 339
Score = 61.4 bits (149), Expect = 1e-09
Identities = 11/101 (10%), Positives = 24/101 (23%), Gaps = 1/101 (0%)
Query: 486 PLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYG 545
A +C + + ++ + + + L V
Sbjct: 252 KESAWEAHLGDTLTIRCDTKQQGMTKVWVSPSNEQVLSQGSNGSVSVRNG-DLFFKKVQV 310
Query: 546 VDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPRFRDTA 586
D Y C A+ + ++ EL + A
Sbjct: 311 EDGGVYTCYAMGETFNETLSVELKVYNFTLHGHHDTLNAAA 351
Score = 61.4 bits (149), Expect = 1e-09
Identities = 11/101 (10%), Positives = 24/101 (23%), Gaps = 1/101 (0%)
Query: 2093 PLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYG 2152
A +C + + ++ + + + L V
Sbjct: 252 KESAWEAHLGDTLTIRCDTKQQGMTKVWVSPSNEQVLSQGSNGSVSVRNG-DLFFKKVQV 310
Query: 2153 VDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPRFRDTA 2193
D Y C A+ + ++ EL + A
Sbjct: 311 EDGGVYTCYAMGETFNETLSVELKVYNFTLHGHHDTLNAAA 351
Score = 57.9 bits (140), Expect = 2e-08
Identities = 16/104 (15%), Positives = 34/104 (32%), Gaps = 1/104 (0%)
Query: 576 FNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSERHAILT 635
FN G+ + ++ K+ NE + S G + S R+ L
Sbjct: 246 FNCSEYKESAWEAHLGDTLTIRCDTKQQGMTKVWVSPSNEQVLSQGS-NGSVSVRNGDLF 304
Query: 636 IRDASNVDTAPYRVVAENDLGMDSAIVKIQISDRPDPPQFPTVE 679
+ D Y A + ++ V++++ + T+
Sbjct: 305 FKKVQVEDGGVYTCYAMGETFNETLSVELKVYNFTLHGHHDTLN 348
Score = 46.8 bits (111), Expect = 6e-05
Identities = 12/109 (11%), Positives = 32/109 (29%), Gaps = 2/109 (1%)
Query: 1429 VRDITVKAGEDFSIHVPFMAFPQPAAFWFANDSIIDDSDTRVHKQLTMNSASLVVKNSQR 1488
G+ +I + ++ + + +++ + L K Q
Sbjct: 253 ESAWEAHLGDTLTIRCDTKQQGMTKVWVSPSNEQVLSQGSNGS--VSVRNGDLFFKKVQV 310
Query: 1489 SDGGQYRLQLKNPAGFDTATLHSRLRTLPDSVNPRCHLPSSTSKERPKF 1537
DGG Y +T ++ ++ + ++ P+F
Sbjct: 311 EDGGVYTCYAMGETFNETLSVELKVYNFTLHGHHDTLNAAADPWSHPQF 359
Score = 45.6 bits (108), Expect = 1e-04
Identities = 16/115 (13%), Positives = 40/115 (34%), Gaps = 7/115 (6%)
Query: 190 PNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKE 249
+A GD ++ +V ++ + V S + + + F K+++ E
Sbjct: 253 ESAWEAHLGDTLTIRCDTKQQGMTKVWVSPSNEQVLSQGSNGSVSVRNGDL-FFKKVQVE 311
Query: 250 DAGDYTVNLSNSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYD 304
D G YT + + + + + + T + W+ P+++
Sbjct: 312 DGGVYTCYAMGETFNETLSVELKVYNFTLHG------HHDTLNAAADPWSHPQFE 360
Score = 45.6 bits (108), Expect = 1e-04
Identities = 16/115 (13%), Positives = 40/115 (34%), Gaps = 7/115 (6%)
Query: 1797 PNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKE 1856
+A GD ++ +V ++ + V S + + + F K+++ E
Sbjct: 253 ESAWEAHLGDTLTIRCDTKQQGMTKVWVSPSNEQVLSQGSNGSVSVRNGDL-FFKKVQVE 311
Query: 1857 DAGDYTVNLSNSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYD 1911
D G YT + + + + + + T + W+ P+++
Sbjct: 312 DGGVYTCYAMGETFNETLSVELKVYNFTLHG------HHDTLNAAADPWSHPQFE 360
Score = 45.6 bits (108), Expect = 1e-04
Identities = 21/154 (13%), Positives = 43/154 (27%), Gaps = 15/154 (9%)
Query: 1084 LELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPWSSSSDIIMCCAPPCAPKITSDLSI 1143
L L R S + + + + C + S D C
Sbjct: 207 LYQLFSHWQYRQLSSVMDFQEDLY-CMHSKKLHN--IFSLDFFNCSEYK----------E 253
Query: 1144 RDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQTIYRNKSAKRAT 1203
G+ TI + + + ++V G + N ++ K +
Sbjct: 254 SAWEAHLGDTLTIRCDTKQQGMTKVWVSPSNEQVLSQGSNGSVSVRNGDLFFKKV--QVE 311
Query: 1204 DSGSYTIQLVNTVGSDSASCKVYVVDKPSPPQGP 1237
D G YT + +++ S ++ V +
Sbjct: 312 DGGVYTCYAMGETFNETLSVELKVYNFTLHGHHD 345
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4
complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB:
3zyo_A* 3zyn_A* 2dl9_A
Length = 452
Score = 62.1 bits (151), Expect = 1e-09
Identities = 24/99 (24%), Positives = 39/99 (39%), Gaps = 9/99 (9%)
Query: 480 APEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREI----TPSARHHIFAEGDT 535
AP I+ R+ N + A+ +C P ++ WL + + + R + +G
Sbjct: 352 APFIMDAPRDLNISEGRMAELKCRTP--PMSSVKWLLPNGTVLSHASRHPRISVLNDG-- 407
Query: 536 YTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAP 574
TL + V D Y C N G + A L + TA
Sbjct: 408 -TLNFSHVLLSDTGVYTCMVTNVAGNSNASAYLNVSTAG 445
Score = 62.1 bits (151), Expect = 1e-09
Identities = 24/99 (24%), Positives = 39/99 (39%), Gaps = 9/99 (9%)
Query: 2087 APEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREI----TPSARHHIFAEGDT 2142
AP I+ R+ N + A+ +C P ++ WL + + + R + +G
Sbjct: 352 APFIMDAPRDLNISEGRMAELKCRTP--PMSSVKWLLPNGTVLSHASRHPRISVLNDG-- 407
Query: 2143 YTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAP 2181
TL + V D Y C N G + A L + TA
Sbjct: 408 -TLNFSHVLLSDTGVYTCMVTNVAGNSNASAYLNVSTAG 445
Score = 59.8 bits (145), Expect = 6e-09
Identities = 25/100 (25%), Positives = 41/100 (41%), Gaps = 9/100 (9%)
Query: 89 EKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREI----SSGARYRVETAGG 144
P + +DL + G++ L+C P+ +WL + S R V G
Sbjct: 351 SAPFIMDAPRDLNISEGRMAELKCRTP--PMSSVKWLLPNGTVLSHASRHPRISVLNDGT 408
Query: 145 VFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPP 184
L+F+ V D G YTC N G ++ S+ + + T
Sbjct: 409 ---LNFSHVLLSDTGVYTCMVTNVAGNSNASAYLNVSTAG 445
Score = 59.8 bits (145), Expect = 6e-09
Identities = 25/100 (25%), Positives = 41/100 (41%), Gaps = 9/100 (9%)
Query: 1696 EKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREI----SSGARYRVETAGG 1751
P + +DL + G++ L+C P+ +WL + S R V G
Sbjct: 351 SAPFIMDAPRDLNISEGRMAELKCRTP--PMSSVKWLLPNGTVLSHASRHPRISVLNDGT 408
Query: 1752 VFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPP 1791
L+F+ V D G YTC N G ++ S+ + + T
Sbjct: 409 ---LNFSHVLLSDTGVYTCMVTNVAGNSNASAYLNVSTAG 445
Score = 50.1 bits (120), Expect = 5e-06
Identities = 20/107 (18%), Positives = 30/107 (28%), Gaps = 8/107 (7%)
Query: 572 TAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSERH 631
+AP PR +G +K P + W N + S H S +
Sbjct: 351 SAPFIMDAPR---DLNISEGRMAELKCRTP--PMSSVKWLLPNGTVLSHASRHPRISVLN 405
Query: 632 A-ILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQISDRP--DPPQF 675
L DT Y + N G +A + +S
Sbjct: 406 DGTLNFSHVLLSDTGVYTCMVTNVAGNSNASAYLNVSTAGTHHHHHH 452
Score = 49.4 bits (118), Expect = 1e-05
Identities = 23/98 (23%), Positives = 41/98 (41%), Gaps = 5/98 (5%)
Query: 182 TPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVS-LTKNGRVVQSDDRF-KFTVLDDYI 239
+ P I P L I EG ++ V L NG V+ R + +VL+D
Sbjct: 351 SAPFIMDAPRDLNISEGRM--AELKCRTPPMSSVKWLLPNGTVLSHASRHPRISVLNDGT 408
Query: 240 IIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLP 277
+ + D G YT ++N +G+ + + +N++
Sbjct: 409 L-NFSHVLLSDTGVYTCMVTNVAGNSNASAYLNVSTAG 445
Score = 49.4 bits (118), Expect = 1e-05
Identities = 23/98 (23%), Positives = 41/98 (41%), Gaps = 5/98 (5%)
Query: 1789 TPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVS-LTKNGRVVQSDDRF-KFTVLDDYI 1846
+ P I P L I EG ++ V L NG V+ R + +VL+D
Sbjct: 351 SAPFIMDAPRDLNISEGRM--AELKCRTPPMSSVKWLLPNGTVLSHASRHPRISVLNDGT 408
Query: 1847 IIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLP 1884
+ + D G YT ++N +G+ + + +N++
Sbjct: 409 L-NFSHVLLSDTGVYTCMVTNVAGNSNASAYLNVSTAG 445
Score = 41.7 bits (98), Expect = 0.003
Identities = 26/140 (18%), Positives = 45/140 (32%), Gaps = 33/140 (23%)
Query: 1120 SSSSDIIMCCAPP-----------------CAPKITSDLSIRDMTVLAGEEFTITVPFSG 1162
++S+ C AP AP I + RD+ + G +
Sbjct: 321 TNSTCCGRCHAPMHMRGRYLVEVDQASFQCSAPFIMD--APRDLNISEGR--MAELKCRT 376
Query: 1163 RPKPTPIWTVNGDEV----SPDGRIKFETSENQTIY-RNKSAKRATDSGSYTIQLVNTVG 1217
P + W + V S RI + T+ + +D+G YT + N G
Sbjct: 377 PPMSSVKWLLPNGTVLSHASRHPRIS--VLNDGTLNFSHVLL---SDTGVYTCMVTNVAG 431
Query: 1218 SDSASCKVYVVDKPSPPQGP 1237
+ +AS + V +
Sbjct: 432 NSNASAYLNV--STAGTHHH 449
Score = 37.8 bits (88), Expect = 0.041
Identities = 16/81 (19%), Positives = 30/81 (37%), Gaps = 2/81 (2%)
Query: 1430 RDITVKAGEDFSIHVPFMAFPQPAAFWFANDSIIDDSDTRVHKQLTMNSASLVVKNSQRS 1489
RD+ + G + P + W + + +R + +N +L + S
Sbjct: 360 RDLNISEGRMAELKCR--TPPMSSVKWLLPNGTVLSHASRHPRISVLNDGTLNFSHVLLS 417
Query: 1490 DGGQYRLQLKNPAGFDTATLH 1510
D G Y + N AG A+ +
Sbjct: 418 DTGVYTCMVTNVAGNSNASAY 438
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma
gondii} PDB: 3q5z_A*
Length = 371
Score = 61.6 bits (149), Expect = 1e-09
Identities = 18/118 (15%), Positives = 37/118 (31%), Gaps = 6/118 (5%)
Query: 808 PQPVDIKTSSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEK---ELI 864
VD S ++E + G VV R+ + FA K + + E +
Sbjct: 50 ETTVDSLLSQGERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERL 109
Query: 865 RKEIDIMNQLHHPKLINLHDAFEDDDEMVLIFEVLDRPHPPENLHADEFAGDSLTLYW 922
+ +L + +A + ++ V + PP + ++ Y
Sbjct: 110 HEATFAAARLLGE---SPEEARDRRRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYL 164
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural
genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Length = 458
Score = 61.8 bits (150), Expect = 2e-09
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 9/91 (9%)
Query: 818 VYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIP-VSHNLE--KELIRKEIDIMNQL 874
+ D Y+I IGTG++G V ++ + A K I V +L K ++R EI I+N+L
Sbjct: 51 IPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILR-EIAILNRL 109
Query: 875 HHPKLINLHD-----AFEDDDEMVLIFEVLD 900
+H ++ + D E DE+ ++ E+ D
Sbjct: 110 NHDHVVKVLDIVIPKDVEKFDELYVVLEIAD 140
>3rbg_A Cytotoxic and regulatory T-cell molecule; IGV, crtam, structural
genomics, PSI-biology, NEW YORK struc genomics research
consortium, nysgrc; 2.30A {Homo sapiens}
Length = 124
Score = 56.9 bits (137), Expect = 2e-09
Identities = 18/106 (16%), Positives = 37/106 (34%), Gaps = 10/106 (9%)
Query: 91 PDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLR--------NGREISSGARYRV-ET 141
+ + V G+ LTL+C + +WL N + ++Y++
Sbjct: 2 GSLTNHTETITVEEGQTLTLKCVTSLRKNSSLQWLTPSGFTIFLNEYPVLKNSKYQLLHH 61
Query: 142 AGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRID 187
+ + VT D G Y C Y+ + +V + + +
Sbjct: 62 SANQLSITVPNVTLQDEGVYKCLHYSD-SVSTKEVKVIVLATMKGE 106
Score = 56.9 bits (137), Expect = 2e-09
Identities = 18/106 (16%), Positives = 37/106 (34%), Gaps = 10/106 (9%)
Query: 1698 PDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLR--------NGREISSGARYRV-ET 1748
+ + V G+ LTL+C + +WL N + ++Y++
Sbjct: 2 GSLTNHTETITVEEGQTLTLKCVTSLRKNSSLQWLTPSGFTIFLNEYPVLKNSKYQLLHH 61
Query: 1749 AGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRID 1794
+ + VT D G Y C Y+ + +V + + +
Sbjct: 62 SANQLSITVPNVTLQDEGVYKCLHYSD-SVSTKEVKVIVLATMKGE 106
Score = 53.5 bits (128), Expect = 2e-08
Identities = 11/104 (10%), Positives = 34/104 (32%), Gaps = 10/104 (9%)
Query: 481 PEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSRE--------ITPSARHHI-FA 531
+ + +C + ++ WL S + ++++ +
Sbjct: 2 GSLTNHTETITVEEGQTLTLKCVTSLRKNSSLQWLTPSGFTIFLNEYPVLKNSKYQLLHH 61
Query: 532 EGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPK 575
+ ++ + +V D Y C V + + ++I++ K
Sbjct: 62 SANQLSITVPNVTLQDEGVYKCL-HYSDSVSTKEVKVIVLATMK 104
Score = 53.5 bits (128), Expect = 2e-08
Identities = 11/104 (10%), Positives = 34/104 (32%), Gaps = 10/104 (9%)
Query: 2088 PEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSRE--------ITPSARHHI-FA 2138
+ + +C + ++ WL S + ++++ +
Sbjct: 2 GSLTNHTETITVEEGQTLTLKCVTSLRKNSSLQWLTPSGFTIFLNEYPVLKNSKYQLLHH 61
Query: 2139 EGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPK 2182
+ ++ + +V D Y C V + + ++I++ K
Sbjct: 62 SANQLSITVPNVTLQDEGVYKCL-HYSDSVSTKEVKVIVLATMK 104
Score = 43.1 bits (101), Expect = 1e-04
Identities = 16/108 (14%), Positives = 30/108 (27%), Gaps = 11/108 (10%)
Query: 1135 PKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIW--------TVNGDEVSPDGRIKFE 1186
+T+ +TV G+ T+ S R + W +N V + + +
Sbjct: 2 GSLTN--HTETITVEEGQTLTLKCVTSLRKNSSLQWLTPSGFTIFLNEYPVLKNSKYQLL 59
Query: 1187 TSENQTIYRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYVVDKPSPP 1234
+ D G Y + + KV V+
Sbjct: 60 HHSANQLSITVPNVTLQDEGVYKCL-HYSDSVSTKEVKVIVLATMKGE 106
Score = 33.0 bits (75), Expect = 0.31
Identities = 20/122 (16%), Positives = 39/122 (31%), Gaps = 14/122 (11%)
Query: 1430 RDITVKAGEDFSIHVPFMAFPQPAAFWFA-NDSIIDDSDTRVHK-------QLTMNSASL 1481
ITV+ G+ ++ + W + I ++ V K + N S+
Sbjct: 9 ETITVEEGQTLTLKCVTSLRKNSSLQWLTPSGFTIFLNEYPVLKNSKYQLLHHSANQLSI 68
Query: 1482 VVKNSQRSDGGQYRLQLKNPAGFDTATLHSRLRTLPDSVNPRCHLPSSTSKERPKFPTHP 1541
V N D G Y+ + ++ ++ + + S RP H
Sbjct: 69 TVPNVTLQDEGVYKCLHY------SDSVSTKEVKVIVLATMKGEFCRYPSHWRPLEHHHH 122
Query: 1542 NH 1543
+H
Sbjct: 123 HH 124
Score = 33.0 bits (75), Expect = 0.34
Identities = 9/97 (9%), Positives = 35/97 (36%), Gaps = 10/97 (10%)
Query: 591 GENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSERHAI---------LTIRDASN 641
G+ + +K + + W + + V + ++ + +T+ + +
Sbjct: 16 GQTLTLKCVTSLRKNSSLQWLTPSGFTIFLNEYPVLKNSKYQLLHHSANQLSITVPNVTL 75
Query: 642 VDTAPYR-VVAENDLGMDSAIVKIQISDRPDPPQFPT 677
D Y+ + + + V + + + + ++P+
Sbjct: 76 QDEGVYKCLHYSDSVSTKEVKVIVLATMKGEFCRYPS 112
Score = 30.3 bits (68), Expect = 3.0
Identities = 7/66 (10%), Positives = 19/66 (28%), Gaps = 2/66 (3%)
Query: 217 LTKNGRVVQSDDRFKFTVLDDYII-IFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITG 275
+ N V + +++ + I + + +D G Y S + + +
Sbjct: 43 IFLNEYPVLKNSKYQLLHHSANQLSITVPNVTLQDEGVYKCLH-YSDSVSTKEVKVIVLA 101
Query: 276 LPGPPI 281
Sbjct: 102 TMKGEF 107
Score = 30.3 bits (68), Expect = 3.0
Identities = 7/66 (10%), Positives = 19/66 (28%), Gaps = 2/66 (3%)
Query: 1824 LTKNGRVVQSDDRFKFTVLDDYII-IFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITG 1882
+ N V + +++ + I + + +D G Y S + + +
Sbjct: 43 IFLNEYPVLKNSKYQLLHHSANQLSITVPNVTLQDEGVYKCLH-YSDSVSTKEVKVIVLA 101
Query: 1883 LPGPPI 1888
Sbjct: 102 TMKGEF 107
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open
conformation, transferase; HET: TPO; 2.80A
{Saccharomyces cerevisiae} SCOP: d.144.1.7
Length = 318
Score = 60.6 bits (148), Expect = 2e-09
Identities = 24/87 (27%), Positives = 45/87 (51%), Gaps = 15/87 (17%)
Query: 820 DHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELI--RKEID-------I 870
+ IL +GTG+FG VH R R G +A K L+KE++ K+++ +
Sbjct: 6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKV------LKKEIVVRLKQVEHTNDERLM 59
Query: 871 MNQLHHPKLINLHDAFEDDDEMVLIFE 897
++ + HP +I + F+D ++ +I +
Sbjct: 60 LSIVTHPFIIRMWGTFQDAQQIFMIMD 86
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR;
3.30A {Ustilago maydis}
Length = 394
Score = 60.8 bits (148), Expect = 2e-09
Identities = 23/96 (23%), Positives = 45/96 (46%), Gaps = 16/96 (16%)
Query: 820 DHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQLHHPKL 879
Y + IG G+FGVV + + ++ + A K + +K +E+ IM + HP +
Sbjct: 40 IAYTNCKVIGNGSFGVVFQAKLVESDEV-AIKKVL----QDKRFKNRELQIMRIVKHPNV 94
Query: 880 INLHDAF------EDDDEMVLIFEVLDRPHPPENLH 909
++L F +D+ + L+ E + PE ++
Sbjct: 95 VDLKAFFYSNGDKKDEVFLNLVLEYV-----PETVY 125
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase,
nucleotide-binding, staurosporine-binding,
serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A
{Rattus norvegicus}
Length = 476
Score = 61.3 bits (149), Expect = 2e-09
Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 3/80 (3%)
Query: 821 HYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKEL---IRKEIDIMNQLHHP 877
HY + + +G G FG V + TG+ A K + ++ IR+EI + HP
Sbjct: 17 HYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHP 76
Query: 878 KLINLHDAFEDDDEMVLIFE 897
+I L+ ++ ++ E
Sbjct: 77 HIIKLYQVISTPSDIFMVME 96
>3so5_A LIG-3, leucine-rich repeats and immunoglobulin-like DOMA protein 3;
structural genomics, joint center for struct genomics,
JCSG; HET: MLY MSE; 1.70A {Mus musculus}
Length = 112
Score = 55.9 bits (134), Expect = 3e-09
Identities = 15/95 (15%), Positives = 25/95 (26%), Gaps = 10/95 (10%)
Query: 91 PDFIVPLKDLVVPLGKLLTLQCEATGTPVP--KCRWLRNGREISSGA---RYRVETAGGV 145
P V + G ++ C A + W + + + GG
Sbjct: 11 PQITVQPETQSAIXGSDVSFTCSAASSSDSPMTFAWXXDNEALQDAEMENYAHLRAQGGE 70
Query: 146 FR-----LHFNEVTDVDNGDYTCEAYNSVGFAHTS 175
L V G Y C N G +++
Sbjct: 71 LMEYTTILRLRNVEFTSEGXYQCVISNHFGSSYSV 105
Score = 55.9 bits (134), Expect = 3e-09
Identities = 15/95 (15%), Positives = 25/95 (26%), Gaps = 10/95 (10%)
Query: 1698 PDFIVPLKDLVVPLGKLLTLQCEATGTPVP--KCRWLRNGREISSGA---RYRVETAGGV 1752
P V + G ++ C A + W + + + GG
Sbjct: 11 PQITVQPETQSAIXGSDVSFTCSAASSSDSPMTFAWXXDNEALQDAEMENYAHLRAQGGE 70
Query: 1753 FR-----LHFNEVTDVDNGDYTCEAYNSVGFAHTS 1782
L V G Y C N G +++
Sbjct: 71 LMEYTTILRLRNVEFTSEGXYQCVISNHFGSSYSV 105
Score = 55.5 bits (133), Expect = 4e-09
Identities = 23/101 (22%), Positives = 34/101 (33%), Gaps = 11/101 (10%)
Query: 481 PEIIVPLRNANAIQNHNAQFQCTITGCPKP--TISWLKGSREI---TPSARHHIFAEGD- 534
P+I V +AI + F C+ T +W + + H+ A+G
Sbjct: 11 PQITVQPETQSAIXGSDVSFTCSAASSSDSPMTFAWXXDNEALQDAEMENYAHLRAQGGE 70
Query: 535 ----TYTLIINSVYGVDADEYVCRAVNKGG-VKSTKAELII 570
T L + +V Y C N G S A L I
Sbjct: 71 LMEYTTILRLRNVEFTSEGXYQCVISNHFGSSYSVXAXLTI 111
Score = 55.5 bits (133), Expect = 4e-09
Identities = 23/101 (22%), Positives = 34/101 (33%), Gaps = 11/101 (10%)
Query: 2088 PEIIVPLRNANAIQNHNAQFQCTITGCPKP--TISWLKGSREI---TPSARHHIFAEGD- 2141
P+I V +AI + F C+ T +W + + H+ A+G
Sbjct: 11 PQITVQPETQSAIXGSDVSFTCSAASSSDSPMTFAWXXDNEALQDAEMENYAHLRAQGGE 70
Query: 2142 ----TYTLIINSVYGVDADEYVCRAVNKGG-VKSTKAELII 2177
T L + +V Y C N G S A L I
Sbjct: 71 LMEYTTILRLRNVEFTSEGXYQCVISNHFGSSYSVXAXLTI 111
Score = 42.8 bits (100), Expect = 1e-04
Identities = 16/106 (15%), Positives = 32/106 (30%), Gaps = 20/106 (18%)
Query: 1412 PVIVEEQPNKPVMDLSGVRDITVKAGEDFSIHVPFMAFPQPAA--FWFANDSIIDDSDTR 1469
P I QP + G D S + W ++ + D++
Sbjct: 11 PQITV-QP----------ETQSAIXGSDVSFTCSAASSSDSPMTFAWXXDNEALQDAEME 59
Query: 1470 VHKQLTMN-------SASLVVKNSQRSDGGQYRLQLKNPAGFDTAT 1508
+ L + L ++N + + G Y+ + N G +
Sbjct: 60 NYAHLRAQGGELMEYTTILRLRNVEFTSEGXYQCVISNHFGSSYSV 105
Score = 37.4 bits (86), Expect = 0.009
Identities = 15/103 (14%), Positives = 28/103 (27%), Gaps = 11/103 (10%)
Query: 1129 CAPPCAPKITSDLSIRDMTVLAGEEFTITVPFSGRPKP--TPIWTVNGDEVSPDGRIKFE 1186
C P+IT + + G + + T + T W + + + +
Sbjct: 5 CDDFPXPQITV--QPETQSAIXGSDVSFTCSAASSSDSPMTFAWXXDNEALQDAEMENYA 62
Query: 1187 TSENQTIYRNKSAK-------RATDSGSYTIQLVNTVGSDSAS 1222
Q + T G Y + N GS +
Sbjct: 63 HLRAQGGELMEYTTILRLRNVEFTSEGXYQCVISNHFGSSYSV 105
Score = 36.6 bits (84), Expect = 0.014
Identities = 19/97 (19%), Positives = 30/97 (30%), Gaps = 13/97 (13%)
Query: 574 PKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKIT--WYRDNEVIESG---GHFHVETS 628
P+ V P T G +V +T W DNE ++ + H+
Sbjct: 11 PQITVQPE---TQSAIXGSDVSFTCSAASSSDSPMTFAWXXDNEALQDAEMENYAHLRAQ 67
Query: 629 ERH-----AILTIRDASNVDTAPYRVVAENDLGMDSA 660
IL +R+ Y+ V N G +
Sbjct: 68 GGELMEYTTILRLRNVEFTSEGXYQCVISNHFGSSYS 104
Score = 34.7 bits (79), Expect = 0.070
Identities = 15/92 (16%), Positives = 31/92 (33%), Gaps = 10/92 (10%)
Query: 184 PRIDRMPNALYIPEGDNT--KVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFT-------- 233
P+I P G + + D PM + + +Q + +
Sbjct: 11 PQITVQPETQSAIXGSDVSFTCSAASSSDSPMTFAWXXDNEALQDAEMENYAHLRAQGGE 70
Query: 234 VLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSV 265
+++ I+ ++ + G Y +SN GS
Sbjct: 71 LMEYTTILRLRNVEFTSEGXYQCVISNHFGSS 102
Score = 34.7 bits (79), Expect = 0.070
Identities = 15/92 (16%), Positives = 31/92 (33%), Gaps = 10/92 (10%)
Query: 1791 PRIDRMPNALYIPEGDNT--KVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFT-------- 1840
P+I P G + + D PM + + +Q + +
Sbjct: 11 PQITVQPETQSAIXGSDVSFTCSAASSSDSPMTFAWXXDNEALQDAEMENYAHLRAQGGE 70
Query: 1841 VLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSV 1872
+++ I+ ++ + G Y +SN GS
Sbjct: 71 LMEYTTILRLRNVEFTSEGXYQCVISNHFGSS 102
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural
genomics CON SGC; 2.05A {Plasmodium berghei} PDB:
3nie_A*
Length = 432
Score = 60.5 bits (147), Expect = 4e-09
Identities = 28/105 (26%), Positives = 48/105 (45%), Gaps = 9/105 (8%)
Query: 804 SKYVPQPVDIKTSSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFI--PVSHNLE- 860
+ IK V D+Y I IG G++G V+ ++ T A K + ++
Sbjct: 10 GRENLYFQGIKNVHVPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDC 69
Query: 861 KELIRKEIDIMNQLHHPKLINLHDAF-----EDDDEMVLIFEVLD 900
K ++R EI I+N+L +I L+D DE+ ++ E+ D
Sbjct: 70 KRILR-EITILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIAD 113
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase,
metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Length = 295
Score = 59.2 bits (144), Expect = 5e-09
Identities = 15/69 (21%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Query: 828 IGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQLHHPKLINLHDAFE 887
+G G +G+V+ R+ A K IP + + + +EI + L H ++
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLG-SF 88
Query: 888 DDDEMVLIF 896
++ + IF
Sbjct: 89 SENGFIKIF 97
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent
kinase, cell cycle control, alpha/beta, complex
(inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP:
d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B*
2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B
2w9f_B
Length = 326
Score = 59.1 bits (144), Expect = 5e-09
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 17/95 (17%)
Query: 820 DHYDILEEIGTGAFGVVHRCRERK-TGNIFAAKFIPVSHNLEKE-----LIRKEIDIMNQ 873
Y+ + EIG GA+G V + R+ K G A K + V +E IR E+ ++
Sbjct: 11 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQT--GEEGMPLSTIR-EVAVLRH 67
Query: 874 LH---HPKLINLHDAF-----EDDDEMVLIFEVLD 900
L HP ++ L D + + ++ L+FE +D
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVD 102
>2b5i_B Interleukin-2 receptor beta chain; four-helix bundle, fibronectin
domain, cytokine-cytokine REC complex; HET: NAG; 2.30A
{Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3qaz_B*
2erj_B*
Length = 214
Score = 57.5 bits (138), Expect = 6e-09
Identities = 30/203 (14%), Positives = 51/203 (25%), Gaps = 21/203 (10%)
Query: 293 TCTLHWNPPKYDGGLKVTHYVVERRDISMPHWIC---------ISTTCHDTTFIVQGLTE 343
+C W+ + V D C + Q LT
Sbjct: 19 SCV--WSQDGALQD--TSCQVHAWPDRRRWQQTCELLPVSQASWACNLILGAPDSQKLTT 74
Query: 344 GQEYLFHVMAVNENG-MGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPL 402
V+ ++ P + + P V V N+SW+
Sbjct: 75 VDIVTLRVLCREGVRWRVMAIQDFKPFE----NLRLMAPISLQVVHVETHRCNISWEISQ 130
Query: 403 DDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQ--INIPNLIEGRQYEFRVYAQNEAGL 460
+ + W+ + Q I + L QYEF+V + G
Sbjct: 131 ASHYFERHLEFEARTLSPGHTWEEAPLLTLKQKQEWICLETLTPDTQYEFQVRVKPLQGE 190
Query: 461 S-LPSSASNSVQIKDPMAAKAPE 482
S S + + AA +
Sbjct: 191 FTTWSPWSQPLAFRTKPAALGKD 213
Score = 57.5 bits (138), Expect = 6e-09
Identities = 30/203 (14%), Positives = 51/203 (25%), Gaps = 21/203 (10%)
Query: 1900 TCTLHWNPPKYDGGLKVTHYVVERRDISMPHWIC---------ISTTCHDTTFIVQGLTE 1950
+C W+ + V D C + Q LT
Sbjct: 19 SCV--WSQDGALQD--TSCQVHAWPDRRRWQQTCELLPVSQASWACNLILGAPDSQKLTT 74
Query: 1951 GQEYLFHVMAVNENG-MGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPL 2009
V+ ++ P + + P V V N+SW+
Sbjct: 75 VDIVTLRVLCREGVRWRVMAIQDFKPFE----NLRLMAPISLQVVHVETHRCNISWEISQ 130
Query: 2010 DDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQ--INIPNLIEGRQYEFRVYAQNEAGL 2067
+ + W+ + Q I + L QYEF+V + G
Sbjct: 131 ASHYFERHLEFEARTLSPGHTWEEAPLLTLKQKQEWICLETLTPDTQYEFQVRVKPLQGE 190
Query: 2068 S-LPSSASNSVQIKDPMAAKAPE 2089
S S + + AA +
Sbjct: 191 FTTWSPWSQPLAFRTKPAALGKD 213
Score = 44.4 bits (104), Expect = 2e-04
Identities = 19/123 (15%), Positives = 31/123 (25%), Gaps = 10/123 (8%)
Query: 649 VVAENDLGMDSAIVKIQISDRPDPPQFPTVEDIGHDSLALVWRAP-IWDGGSNITNYIVE 707
M K + R P V + + W +
Sbjct: 85 REGVRWRVMAIQDFKPFENLRLMAPISLQVVHVETHRCNISWEISQASHYFERHLEFEAR 144
Query: 708 KREHPMSSWIRVGNT----RFTTMAITGLSPGHQYEFRVYAENVYGR----SDPSTTSDL 759
P +W + + + L+P QYEF+V + + G S S
Sbjct: 145 TLS-PGHTWEEAPLLTLKQKQEWICLETLTPDTQYEFQVRVKPLQGEFTTWSPWSQPLAF 203
Query: 760 ITT 762
T
Sbjct: 204 RTK 206
Score = 43.2 bits (101), Expect = 4e-04
Identities = 24/145 (16%), Positives = 44/145 (30%), Gaps = 25/145 (17%)
Query: 1208 YTIQLVNTVGSDSASCKVYVVD-----KPSPPQGPLDVSDITPESCSLSWKPPLDDGGSP 1262
T++++ G + + P L V + C++SW+
Sbjct: 78 VTLRVLCREGVRWRVMAIQDFKPFENLRLMAPIS-LQVVHVETHRCNISWEISQASHYFE 136
Query: 1263 ITNYVVEKYESATGFWSK---LSSFVRSPAYDVFGLETNRQYRFRVRAENQYGV------ 1313
+ S W + L+ + + L + QY F+VR + G
Sbjct: 137 RHLEFEARTLSPGHTWEEAPLLTLKQKQEWICLETLTPDTQYEFQVRVKPLQGEFTTWSP 196
Query: 1314 -SEPLELDNSITAKFPFTVPDPPGQ 1337
S+PL T P G+
Sbjct: 197 WSQPLAFR---------TKPAALGK 212
Score = 42.5 bits (99), Expect = 7e-04
Identities = 11/85 (12%), Positives = 23/85 (27%), Gaps = 3/85 (3%)
Query: 901 RPHPPENLHADEFAGDSLTLYW-TPPRDNGGSEITNYVVEKKDYNST--VWTKVSSYVTT 957
R P +L + W + + T ++
Sbjct: 105 RLMAPISLQVVHVETHRCNISWEISQASHYFERHLEFEARTLSPGHTWEEAPLLTLKQKQ 164
Query: 958 PFVRVRNLAIGSTYEFRVMAENQYG 982
++ + L + YEF+V + G
Sbjct: 165 EWICLETLTPDTQYEFQVRVKPLQG 189
Score = 38.6 bits (89), Expect = 0.013
Identities = 16/107 (14%), Positives = 25/107 (23%), Gaps = 4/107 (3%)
Query: 255 TVNLSNSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVV 314
F PI L V + H C + W + +
Sbjct: 84 CREGVRWRVMAIQDFKPFENLRLMAPIS-LQVVHVETHRCNISWEISQASHYFERHLEFE 142
Query: 315 ERRDISMPHWI---CISTTCHDTTFIVQGLTEGQEYLFHVMAVNENG 358
R W ++ ++ LT +Y F V G
Sbjct: 143 ARTLSPGHTWEEAPLLTLKQKQEWICLETLTPDTQYEFQVRVKPLQG 189
Score = 38.6 bits (89), Expect = 0.013
Identities = 16/107 (14%), Positives = 25/107 (23%), Gaps = 4/107 (3%)
Query: 1862 TVNLSNSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVV 1921
F PI L V + H C + W + +
Sbjct: 84 CREGVRWRVMAIQDFKPFENLRLMAPIS-LQVVHVETHRCNISWEISQASHYFERHLEFE 142
Query: 1922 ERRDISMPHWI---CISTTCHDTTFIVQGLTEGQEYLFHVMAVNENG 1965
R W ++ ++ LT +Y F V G
Sbjct: 143 ARTLSPGHTWEEAPLLTLKQKQEWICLETLTPDTQYEFQVRVKPLQG 189
Score = 33.6 bits (76), Expect = 0.56
Identities = 23/231 (9%), Positives = 51/231 (22%), Gaps = 49/231 (21%)
Query: 917 SLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTKVSSYVTT-------PFVRVRNLAIGS 969
++ W+ + + + + + + L
Sbjct: 17 QISCVWSQDGALQDTSCQVHAWPDRRRWQQTCELLPVSQASWACNLILGAPDSQKLTTVD 76
Query: 970 TYEFRVMAENQYGLSKPALT----IDPIKAKHPFDVPGAPGAPKGVDSTEDSISLVWSKP 1025
RV+ A+ + ++ AP + + V ++ W
Sbjct: 77 IVTLRVLCREGVRWRVMAIQDFKPFENLR-------LMAPISLQVVHVETHRCNISWEIS 129
Query: 1026 RHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEGKSIGSERGSTAQFLE 1085
+ + L W +A + + L
Sbjct: 130 QASHYFERHLEFEARTLSPGHTWEEAPLLTLKQKQEWICL-------------------- 169
Query: 1086 LLLMFIPNRVTSLIENHEYEFRV-CAVNAAGQGPWSSSSDIIMCCAPPCAP 1135
+L + +YEF+V WS S + P A
Sbjct: 170 ----------ETLTPDTQYEFQVRVKPLQGEFTTWSPWSQPLAFRTKPAAL 210
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3;
transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae}
PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Length = 353
Score = 58.8 bits (143), Expect = 1e-08
Identities = 23/89 (25%), Positives = 40/89 (44%), Gaps = 6/89 (6%)
Query: 818 VYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFI-PVSHNLEKELIRKEIDIMNQLHH 876
+ + + +G GA+GVV + TG I A K I P L +EI I+ H
Sbjct: 9 ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKH 68
Query: 877 PKLINLHDAF-----EDDDEMVLIFEVLD 900
+I + + E+ +E+ +I E++
Sbjct: 69 ENIITIFNIQRPDSFENFNEVYIIQELMQ 97
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor,
transferase-transferase inhibitor CO; HET: ANP; 1.30A
{Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A*
3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A
3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A*
3owj_A* 3owk_A* ...
Length = 330
Score = 58.4 bits (142), Expect = 1e-08
Identities = 22/87 (25%), Positives = 37/87 (42%), Gaps = 8/87 (9%)
Query: 818 VYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFI-PVSHNLEKELIRKEIDIMNQL-H 875
D Y ++ ++G G + V K + PV +K++ R EI I+ L
Sbjct: 34 NQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK---KKKIKR-EIKILENLRG 89
Query: 876 HPKLINLHDAFEDDDEM--VLIFEVLD 900
P +I L D +D L+FE ++
Sbjct: 90 GPNIITLADIVKDPVSRTPALVFEHVN 116
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily.,
cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Length = 231
Score = 57.1 bits (137), Expect = 1e-08
Identities = 35/211 (16%), Positives = 59/211 (27%), Gaps = 38/211 (18%)
Query: 482 EIIVPLRNANAIQNHNAQFQCTITGCPKPT-ISWLKGSREITP----------------- 523
+ VP ++ + CT TG + W R
Sbjct: 3 RLSVP-PLVEVMRGKSVILDCTPTGTHDHYMLEWFLTDRSGARPRLASAEMQGSELQVTM 61
Query: 524 ---SARHHIFAEGDTYTLIINSVYGVDADEYVCRA-VNKGGVKSTKAELIIMTAPKF-NV 578
R + L++ D +YVC G A L + P+ V
Sbjct: 62 HDTRGRSPPYQLDSQGRLVLAEAQVGDERDYVCVVRAGAAGTAEATARLNVFAKPEATEV 121
Query: 579 PPRFRDTAYFDKGENVVVK-IPFTGYPKPKITWYRDNEVI----ESGGHFHVETSER--- 630
P + + + G P PKITWYR+ + + E ++ +
Sbjct: 122 SPNKGTLSVMEDSAQEIATCNSRNGNPAPKITWYRNGQRLEVPVEMNPEGYMTSRTVREA 181
Query: 631 ------HAILTIRDASNVDTAPYRVVAENDL 655
+ L +R + A + A L
Sbjct: 182 SGLLSLTSTLYLRLRKDDRDASFHCAAHYSL 212
Score = 39.8 bits (92), Expect = 0.006
Identities = 21/141 (14%), Positives = 36/141 (25%), Gaps = 25/141 (17%)
Query: 2089 EIIVPLRNANAIQNHNAQFQCTITGCPKPT-ISWLKGSREITP----------------- 2130
+ VP ++ + CT TG + W R
Sbjct: 3 RLSVP-PLVEVMRGKSVILDCTPTGTHDHYMLEWFLTDRSGARPRLASAEMQGSELQVTM 61
Query: 2131 ---SARHHIFAEGDTYTLIINSVYGVDADEYVCRA-VNKGGVKSTKAELIIMTAPKFNV- 2185
R + L++ D +YVC G A L + P+
Sbjct: 62 HDTRGRSPPYQLDSQGRLVLAEAQVGDERDYVCVVRAGAAGTAEATARLNVFAKPEATEV 121
Query: 2186 -PPRFRDTAYFESDVVVVVCV 2205
P + + +S + C
Sbjct: 122 SPNKGTLSVMEDSAQEIATCN 142
Score = 37.1 bits (85), Expect = 0.036
Identities = 18/83 (21%), Positives = 28/83 (33%), Gaps = 14/83 (16%)
Query: 101 VVPLGKLLTLQCEAT-GTPVPKCRWLRNGREISSGARYR---------VETAGGVF---- 146
V+ C + G P PK W RNG+ + V A G+
Sbjct: 130 VMEDSAQEIATCNSRNGNPAPKITWYRNGQRLEVPVEMNPEGYMTSRTVREASGLLSLTS 189
Query: 147 RLHFNEVTDVDNGDYTCEAYNSV 169
L+ D + + C A+ S+
Sbjct: 190 TLYLRLRKDDRDASFHCAAHYSL 212
Score = 37.1 bits (85), Expect = 0.036
Identities = 18/83 (21%), Positives = 28/83 (33%), Gaps = 14/83 (16%)
Query: 1708 VVPLGKLLTLQCEAT-GTPVPKCRWLRNGREISSGARYR---------VETAGGVF---- 1753
V+ C + G P PK W RNG+ + V A G+
Sbjct: 130 VMEDSAQEIATCNSRNGNPAPKITWYRNGQRLEVPVEMNPEGYMTSRTVREASGLLSLTS 189
Query: 1754 RLHFNEVTDVDNGDYTCEAYNSV 1776
L+ D + + C A+ S+
Sbjct: 190 TLYLRLRKDDRDASFHCAAHYSL 212
Score = 34.8 bits (79), Expect = 0.23
Identities = 30/203 (14%), Positives = 55/203 (27%), Gaps = 37/203 (18%)
Query: 99 DLVVPLGKLLTLQCEATGTP-VPKCRWLR--------------------NGREISSGARY 137
+ V GK + L C TGT W + R
Sbjct: 9 LVEVMRGKSVILDCTPTGTHDHYMLEWFLTDRSGARPRLASAEMQGSELQVTMHDTRGRS 68
Query: 138 RVETAGGVFRLHFNEVTDVDNGDYTCEAY-NSVGFAHTSSRVKIGTPPR---IDRMPNAL 193
RL E D DY C + G A ++R+ + P + L
Sbjct: 69 PPYQLDSQGRLVLAEAQVGDERDYVCVVRAGAAGTAEATARLNVFAKPEATEVSPNKGTL 128
Query: 194 YIPEGDNTKVK--IFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDA 251
+ E ++ G+ +++ +NG+ ++ +E +
Sbjct: 129 SVMEDSAQEIATCNSRNGNPAPKITWYRNGQRLEVPVEMNPEG------YMTSRTVREAS 182
Query: 252 GDYTVN----LSNSSGSVSGTFT 270
G ++ L +F
Sbjct: 183 GLLSLTSTLYLRLRKDDRDASFH 205
Score = 34.8 bits (79), Expect = 0.23
Identities = 30/203 (14%), Positives = 55/203 (27%), Gaps = 37/203 (18%)
Query: 1706 DLVVPLGKLLTLQCEATGTP-VPKCRWLR--------------------NGREISSGARY 1744
+ V GK + L C TGT W + R
Sbjct: 9 LVEVMRGKSVILDCTPTGTHDHYMLEWFLTDRSGARPRLASAEMQGSELQVTMHDTRGRS 68
Query: 1745 RVETAGGVFRLHFNEVTDVDNGDYTCEAY-NSVGFAHTSSRVKIGTPPR---IDRMPNAL 1800
RL E D DY C + G A ++R+ + P + L
Sbjct: 69 PPYQLDSQGRLVLAEAQVGDERDYVCVVRAGAAGTAEATARLNVFAKPEATEVSPNKGTL 128
Query: 1801 YIPEGDNTKVK--IFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDA 1858
+ E ++ G+ +++ +NG+ ++ +E +
Sbjct: 129 SVMEDSAQEIATCNSRNGNPAPKITWYRNGQRLEVPVEMNPEG------YMTSRTVREAS 182
Query: 1859 GDYTVN----LSNSSGSVSGTFT 1877
G ++ L +F
Sbjct: 183 GLLSLTSTLYLRLRKDDRDASFH 205
Score = 34.0 bits (77), Expect = 0.39
Identities = 23/121 (19%), Positives = 39/121 (32%), Gaps = 8/121 (6%)
Query: 1108 VCAVNAAGQGPWSSSSDIIMCCAPPCAPKITSDLSIRDMTVLAGEEFTIT-VPFSGRPKP 1166
VC V A G +++ + + A P A +++ + + + T +G P P
Sbjct: 93 VCVVRAGAAGTAEATARLNVF-AKPEATEVSPNKGTLS-VMEDSAQEIATCNSRNGNPAP 150
Query: 1167 TPIWTVNGDEVSPDGRIKFETSENQTIYRNKSAKRATDSGSYTIQLVNTVGSDSA--SCK 1224
W NG + + E R S + S T+ L A C
Sbjct: 151 KITWYRNGQRLEVPVEMNPEGYMTSRTVREASGLLSLTS---TLYLRLRKDDRDASFHCA 207
Query: 1225 V 1225
Sbjct: 208 A 208
Score = 30.9 bits (69), Expect = 3.9
Identities = 12/96 (12%), Positives = 26/96 (27%), Gaps = 15/96 (15%)
Query: 2086 KAPEIIVPLRNANAIQN-HNAQFQCTIT-GCPKPTISWLKGSREITPSARHHIFAEGDTY 2143
+A E+ + +++ C G P P I+W + + + + +
Sbjct: 117 EATEVSPNKGTLSVMEDSAQEIATCNSRNGNPAPKITWYRNGQRLEVPVEMNPEGYMTSR 176
Query: 2144 -------------TLIINSVYGVDADEYVCRAVNKG 2166
TL + + C A
Sbjct: 177 TVREASGLLSLTSTLYLRLRKDDRDASFHCAAHYSL 212
>1x4y_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes
(CDON)binding...; fibronectin type III, FN3; NMR {Mus
musculus} SCOP: b.1.2.1
Length = 114
Score = 53.6 bits (129), Expect = 1e-08
Identities = 16/101 (15%), Positives = 33/101 (32%), Gaps = 9/101 (8%)
Query: 670 PDPPQFPTVEDIGHDSLALVWRAPIWD-GGSNITNYIVEKREH---PMSSWIRV---GNT 722
P + + ++ L W + I + + R S + + G+
Sbjct: 9 VAGPYITFTDAVNETTIMLKWMYIPASNNNTPIHGFYIYYRPTDSDNDSDYKKDMVEGDR 68
Query: 723 RFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTK 763
+ + I+ L P Y+ ++ N G S+ S T
Sbjct: 69 YWHS--ISHLQPETSYDIKMQCFNEGGESEFSNVMICETKA 107
Score = 52.5 bits (126), Expect = 5e-08
Identities = 14/110 (12%), Positives = 33/110 (30%), Gaps = 8/110 (7%)
Query: 1231 PSPPQGPLDVSDITPESCSLSWK-PPLDDGGSPITNYVVEKYESAT---GFWSKLSSFVR 1286
+ P + + L W P + +PI + + + + + K
Sbjct: 9 VAGPYI-TFTDAVNETTIMLKWMYIPASNNNTPIHGFYIYYRPTDSDNDSDYKKDMVEGD 67
Query: 1287 SPAYDVFGLETNRQYRFRVRAENQYGVSEPLELDNSITAKFPFTVPDPPG 1336
+ + L+ Y +++ N+ G SE + + G
Sbjct: 68 RYWHSISHLQPETSYDIKMQCFNEGGESEFSN---VMICETKARSGPSSG 114
Score = 51.7 bits (124), Expect = 7e-08
Identities = 14/85 (16%), Positives = 30/85 (35%), Gaps = 4/85 (4%)
Query: 904 PPENLHADEFAGDSLTLYWT-PPRDNGGSEITNYVV---EKKDYNSTVWTKVSSYVTTPF 959
P D ++ L W P N + I + + N + + K +
Sbjct: 11 GPYITFTDAVNETTIMLKWMYIPASNNNTPIHGFYIYYRPTDSDNDSDYKKDMVEGDRYW 70
Query: 960 VRVRNLAIGSTYEFRVMAENQYGLS 984
+ +L ++Y+ ++ N+ G S
Sbjct: 71 HSISHLQPETSYDIKMQCFNEGGES 95
Score = 50.6 bits (121), Expect = 2e-07
Identities = 19/92 (20%), Positives = 33/92 (35%), Gaps = 3/92 (3%)
Query: 378 PSPPGIPVVTQVGGDFVNLSWDK-PLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQ 436
+ P I V + L W P + + I G++I SD + +
Sbjct: 9 VAGPYITFTDAVNETTIMLKWMYIPASNNNTPIHGFYIYYRPTDSDNDSDYKKDMVEGDR 68
Query: 437 --INIPNLIEGRQYEFRVYAQNEAGLSLPSSA 466
+I +L Y+ ++ NE G S S+
Sbjct: 69 YWHSISHLQPETSYDIKMQCFNEGGESEFSNV 100
Score = 50.6 bits (121), Expect = 2e-07
Identities = 19/92 (20%), Positives = 33/92 (35%), Gaps = 3/92 (3%)
Query: 1985 PSPPGIPVVTQVGGDFVNLSWDK-PLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQ 2043
+ P I V + L W P + + I G++I SD + +
Sbjct: 9 VAGPYITFTDAVNETTIMLKWMYIPASNNNTPIHGFYIYYRPTDSDNDSDYKKDMVEGDR 68
Query: 2044 --INIPNLIEGRQYEFRVYAQNEAGLSLPSSA 2073
+I +L Y+ ++ NE G S S+
Sbjct: 69 YWHSISHLQPETSYDIKMQCFNEGGESEFSNV 100
Score = 50.2 bits (120), Expect = 3e-07
Identities = 16/115 (13%), Positives = 29/115 (25%), Gaps = 9/115 (7%)
Query: 274 TGLPGPPIGPLDVS--EITKHTCTLHWN-PPKYDGGLKVTHYVVERRDIS---MPHWICI 327
+G GP GP + + T L W P + + + + R +
Sbjct: 3 SGSSGPVAGPYITFTDAVNETTIMLKWMYIPASNNNTPIHGFYIYYRPTDSDNDSDYKKD 62
Query: 328 STTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPG 382
+ L Y + NE G + ++ G
Sbjct: 63 MVEGDRYWHSISHLQPETSYDIKMQCFNEGGESEFSN---VMICETKARSGPSSG 114
Score = 50.2 bits (120), Expect = 3e-07
Identities = 16/115 (13%), Positives = 29/115 (25%), Gaps = 9/115 (7%)
Query: 1881 TGLPGPPIGPLDVS--EITKHTCTLHWN-PPKYDGGLKVTHYVVERRDIS---MPHWICI 1934
+G GP GP + + T L W P + + + + R +
Sbjct: 3 SGSSGPVAGPYITFTDAVNETTIMLKWMYIPASNNNTPIHGFYIYYRPTDSDNDSDYKKD 62
Query: 1935 STTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPG 1989
+ L Y + NE G + ++ G
Sbjct: 63 MVEGDRYWHSISHLQPETSYDIKMQCFNEGGESEFSN---VMICETKARSGPSSG 114
Score = 45.9 bits (109), Expect = 9e-06
Identities = 16/124 (12%), Positives = 31/124 (25%), Gaps = 32/124 (25%)
Query: 1000 DVP-GAPGAPKGVDSTEDSISLVWSK-PRHDGGSPIQRYIVEKRLISDDKWIKASMAHIP 1057
P P E +I L W P + +PI + + R D +
Sbjct: 6 SGPVAGPYITFTDAVNETTIMLKWMYIPASNNNTPIHGFYIYYRPTDSDNDSDYKKDMVE 65
Query: 1058 DTSLKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQG 1117
+ + + L Y+ ++ N G+
Sbjct: 66 GDRYWHSI------------------------------SHLQPETSYDIKMQCFNEGGES 95
Query: 1118 PWSS 1121
+S+
Sbjct: 96 EFSN 99
Score = 30.1 bits (68), Expect = 2.3
Identities = 15/66 (22%), Positives = 23/66 (34%), Gaps = 11/66 (16%)
Query: 22 YIIERREVGGAIWLKCNDYNVL-----ECSFSVLNLVEGNDYEFRIIAVNAIGKSEPS-- 74
+ I R +DY S+ +L Y+ ++ N G+SE S
Sbjct: 44 FYIYYRPTDSDND---SDYKKDMVEGDRYWHSISHLQPETSYDIKMQCFNEGGESEFSNV 100
Query: 75 -ICTTP 79
IC T
Sbjct: 101 MICETK 106
Score = 29.8 bits (67), Expect = 3.4
Identities = 11/37 (29%), Positives = 17/37 (45%), Gaps = 3/37 (8%)
Query: 1653 SFSVLNLVEGNDYEFRIIAVNAIGKSEPS---ICTTP 1686
S+ +L Y+ ++ N G+SE S IC T
Sbjct: 70 WHSISHLQPETSYDIKMQCFNEGGESEFSNVMICETK 106
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis,
transferase; 2.00A {Leishmania major}
Length = 360
Score = 58.1 bits (141), Expect = 1e-08
Identities = 24/113 (21%), Positives = 43/113 (38%), Gaps = 13/113 (11%)
Query: 804 SKYVPQPVDIKTSSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKEL 863
S D ++ D + + G G FG V +E+ TG A K +
Sbjct: 7 SLNAAAAADERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRE 66
Query: 864 IRKEIDIMNQLHHPKLINLHDAF-----EDDDEM--VLIFEVLDRPHPPENLH 909
++ + + LHHP ++ L F D ++ ++ E + P+ LH
Sbjct: 67 LQ-IMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYV-----PDTLH 113
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2,
E.C.2.7.11.17, phosphorylation, AMPKK, metabolism,
binding, calmodulin-binding; HET: 609; 2.40A {Homo
sapiens}
Length = 298
Score = 57.7 bits (140), Expect = 1e-08
Identities = 22/105 (20%), Positives = 42/105 (40%), Gaps = 28/105 (26%)
Query: 821 HYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEK------------------- 861
Y + +EIG G++GVV +A K + + +
Sbjct: 14 QYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGC 73
Query: 862 -------ELIRKEIDIMNQLHHPKLINLHDAFED--DDEMVLIFE 897
E + +EI I+ +L HP ++ L + +D +D + ++FE
Sbjct: 74 IQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFE 118
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex,
transferase,transcription; HET: BAX; 2.20A {Homo
sapiens}
Length = 405
Score = 58.3 bits (141), Expect = 2e-08
Identities = 22/97 (22%), Positives = 45/97 (46%), Gaps = 7/97 (7%)
Query: 809 QPVDIKTSSVYDHYDIL-EEIGTGAFGVVHRCRER--KTGNIFAAKFIPVSHNLEKELIR 865
+ + V D ++ ++G G +G V++ + + K +A K I + R
Sbjct: 9 VKLSSERERVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIE-GTGISMSACR 67
Query: 866 KEIDIMNQLHHPKLINLHDAFED--DDEMVLIFEVLD 900
EI ++ +L HP +I+L F D ++ L+F+ +
Sbjct: 68 -EIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE 103
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding
protein complex, transferase metal protein complex,
nucleus; HET: ANP; 2.65A {Homo sapiens}
Length = 305
Score = 57.3 bits (139), Expect = 2e-08
Identities = 19/83 (22%), Positives = 38/83 (45%), Gaps = 6/83 (7%)
Query: 821 HYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIP----VSHNLEKELIRKEIDIMNQLHH 876
Y + + +G G++G V + +T A K + + ++KEI ++ +L H
Sbjct: 6 KYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRH 65
Query: 877 PKLINLHD--AFEDDDEMVLIFE 897
+I L D E+ +M ++ E
Sbjct: 66 KNVIQLVDVLYNEEKQKMYMVME 88
>3m45_A Cell adhesion molecule 2; IG fold, dimer, disulfide bond,
glycoprotein, immunoglobulin membrane, transmembrane;
HET: NAG; 2.21A {Mus musculus}
Length = 108
Score = 52.9 bits (127), Expect = 3e-08
Identities = 18/106 (16%), Positives = 38/106 (35%), Gaps = 11/106 (10%)
Query: 479 KAPEIIVPL-RNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIF------- 530
K + PL +N ++ A C + ++ W +++
Sbjct: 4 KGSQGQFPLTQNVTVVEGGTAILTCRVDQNDNTSLQWSNPAQQTLYFDDKKALRDNRIEL 63
Query: 531 --AEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAP 574
A ++ ++ V D +Y C + VK++KA L ++ P
Sbjct: 64 VRASWHELSISVSDVSLSDEGQYTCS-LFTMPVKTSKAYLTVLGVP 108
Score = 52.9 bits (127), Expect = 3e-08
Identities = 18/106 (16%), Positives = 38/106 (35%), Gaps = 11/106 (10%)
Query: 2086 KAPEIIVPL-RNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIF------- 2137
K + PL +N ++ A C + ++ W +++
Sbjct: 4 KGSQGQFPLTQNVTVVEGGTAILTCRVDQNDNTSLQWSNPAQQTLYFDDKKALRDNRIEL 63
Query: 2138 --AEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAP 2181
A ++ ++ V D +Y C + VK++KA L ++ P
Sbjct: 64 VRASWHELSISVSDVSLSDEGQYTCS-LFTMPVKTSKAYLTVLGVP 108
Score = 50.6 bits (121), Expect = 2e-07
Identities = 15/104 (14%), Positives = 31/104 (29%), Gaps = 11/104 (10%)
Query: 91 PDFIVPLKD-LVVPLGKLLTLQCEATGTPVPKCRWLRNGREI--------SSGARYRVE- 140
PL + V G L C +W ++ R +
Sbjct: 6 SQGQFPLTQNVTVVEGGTAILTCRVDQNDNTSLQWSNPAQQTLYFDDKKALRDNRIELVR 65
Query: 141 TAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPP 184
+ + ++V+ D G YTC ++ + + + + P
Sbjct: 66 ASWHELSISVSDVSLSDEGQYTCSL-FTMPVKTSKAYLTVLGVP 108
Score = 50.6 bits (121), Expect = 2e-07
Identities = 15/104 (14%), Positives = 31/104 (29%), Gaps = 11/104 (10%)
Query: 1698 PDFIVPLKD-LVVPLGKLLTLQCEATGTPVPKCRWLRNGREI--------SSGARYRVE- 1747
PL + V G L C +W ++ R +
Sbjct: 6 SQGQFPLTQNVTVVEGGTAILTCRVDQNDNTSLQWSNPAQQTLYFDDKKALRDNRIELVR 65
Query: 1748 TAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPP 1791
+ + ++V+ D G YTC ++ + + + + P
Sbjct: 66 ASWHELSISVSDVSLSDEGQYTCSL-FTMPVKTSKAYLTVLGVP 108
Score = 36.0 bits (83), Expect = 0.019
Identities = 16/96 (16%), Positives = 35/96 (36%), Gaps = 9/96 (9%)
Query: 1144 RDMTVLAGEEFTITVPFSGRPKPTPIW--------TVNGDEVSPDGRIKFETSENQTIYR 1195
+++TV+ G +T + W + + D RI+ + +
Sbjct: 14 QNVTVVEGGTAILTCRVDQNDNTSLQWSNPAQQTLYFDDKKALRDNRIELVRASWHELSI 73
Query: 1196 NKSAKRATDSGSYTIQLVNTVGSDSASCKVYVVDKP 1231
+ S +D G YT + T+ ++ + V+ P
Sbjct: 74 SVSDVSLSDEGQYTCS-LFTMPVKTSKAYLTVLGVP 108
Score = 30.6 bits (69), Expect = 1.8
Identities = 15/85 (17%), Positives = 24/85 (28%), Gaps = 8/85 (9%)
Query: 1422 PVMDLSGVRDITVKAGEDFSIHVPFMAFPQPAAFWFANDSIIDDSDTRVHK-----QLTM 1476
+++TV G + + W D + +L
Sbjct: 6 SQGQFPLTQNVTVVEGGTAILTCRVDQNDNTSLQWSNPAQQTLYFDDKKALRDNRIELVR 65
Query: 1477 NSA---SLVVKNSQRSDGGQYRLQL 1498
S S+ V + SD GQY L
Sbjct: 66 ASWHELSISVSDVSLSDEGQYTCSL 90
>2e6q_A Obscurin-like protein 1; IG-like domain, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 112
Score = 53.1 bits (127), Expect = 3e-08
Identities = 21/106 (19%), Positives = 33/106 (31%), Gaps = 17/106 (16%)
Query: 90 KPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISS----------GARYRV 139
+ L+D+ V G+ + + W NG E+ S RYR+
Sbjct: 8 TARLVAGLEDVQVYDGEDAVFSLDLSTIIQGT--WFLNGEELKSNEPEGQVEPGALRYRI 65
Query: 140 ETAGGVFRLHFNEVTDVDNGDY-TCEAYNSVGFAHTSSRVKIGTPP 184
E G RL + V D+G S+ + I
Sbjct: 66 EQKGLQHRLILHAVKHQDSGALVGFSCPG----VQDSAALTIQESS 107
Score = 53.1 bits (127), Expect = 3e-08
Identities = 21/106 (19%), Positives = 33/106 (31%), Gaps = 17/106 (16%)
Query: 1697 KPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISS----------GARYRV 1746
+ L+D+ V G+ + + W NG E+ S RYR+
Sbjct: 8 TARLVAGLEDVQVYDGEDAVFSLDLSTIIQGT--WFLNGEELKSNEPEGQVEPGALRYRI 65
Query: 1747 ETAGGVFRLHFNEVTDVDNGDY-TCEAYNSVGFAHTSSRVKIGTPP 1791
E G RL + V D+G S+ + I
Sbjct: 66 EQKGLQHRLILHAVKHQDSGALVGFSCPG----VQDSAALTIQESS 107
Score = 51.9 bits (124), Expect = 6e-08
Identities = 19/107 (17%), Positives = 40/107 (37%), Gaps = 15/107 (14%)
Query: 478 AKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPS----------ARH 527
+ ++ L + +A F ++ + T W E+ + R+
Sbjct: 6 SGTARLVAGLEDVQVYDGEDAVFSLDLSTIIQGT--WFLNGEELKSNEPEGQVEPGALRY 63
Query: 528 HIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAP 574
I +G + LI+++V D+ V + GV+ + A L I +
Sbjct: 64 RIEQKGLQHRLILHAVKHQDSGALVG--FSCPGVQDS-AALTIQESS 107
Score = 51.9 bits (124), Expect = 6e-08
Identities = 19/107 (17%), Positives = 40/107 (37%), Gaps = 15/107 (14%)
Query: 2085 AKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPS----------ARH 2134
+ ++ L + +A F ++ + T W E+ + R+
Sbjct: 6 SGTARLVAGLEDVQVYDGEDAVFSLDLSTIIQGT--WFLNGEELKSNEPEGQVEPGALRY 63
Query: 2135 HIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAP 2181
I +G + LI+++V D+ V + GV+ + A L I +
Sbjct: 64 RIEQKGLQHRLILHAVKHQDSGALVG--FSCPGVQDS-AALTIQESS 107
Score = 44.6 bits (105), Expect = 2e-05
Identities = 17/116 (14%), Positives = 38/116 (32%), Gaps = 18/116 (15%)
Query: 1130 APPCAPKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSE 1189
+ ++ + L D+ V GE+ ++ S + T W +NG+E+ +
Sbjct: 6 SGT--ARLVAGL--EDVQVYDGEDAVFSLDLSTIIQGT--WFLNGEELKSNEPEGQVEPG 59
Query: 1190 NQTIYRNKSAKR---------ATDSGSYTIQLVNTVGSDSASCKVYVVDKPSPPQG 1236
+ + DSG+ + + S + + + P G
Sbjct: 60 ALRYRIEQKGLQHRLILHAVKHQDSGAL---VGFSCPGVQDSAALTIQESSGPSSG 112
Score = 30.7 bits (69), Expect = 1.5
Identities = 14/116 (12%), Positives = 35/116 (30%), Gaps = 27/116 (23%)
Query: 183 PPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLT------KNGRVVQSDDRFKFTVLD 236
R+ + + +G++ + ++S NG ++S++
Sbjct: 8 TARLVAGLEDVQVYDGEDAVFSL--------DLSTIIQGTWFLNGEELKSNEPEGQVEPG 59
Query: 237 DYIIIF----------IKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPIG 282
+ ++ +D+G + S V + + I GP G
Sbjct: 60 ALRYRIEQKGLQHRLILHAVKHQDSGAL---VGFSCPGVQDSAALTIQESSGPSSG 112
Score = 30.7 bits (69), Expect = 1.5
Identities = 14/116 (12%), Positives = 35/116 (30%), Gaps = 27/116 (23%)
Query: 1790 PPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLT------KNGRVVQSDDRFKFTVLD 1843
R+ + + +G++ + ++S NG ++S++
Sbjct: 8 TARLVAGLEDVQVYDGEDAVFSL--------DLSTIIQGTWFLNGEELKSNEPEGQVEPG 59
Query: 1844 DYIIIF----------IKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPIG 1889
+ ++ +D+G + S V + + I GP G
Sbjct: 60 ALRYRIEQKGLQHRLILHAVKHQDSGAL---VGFSCPGVQDSAALTIQESSGPSSG 112
>3v6o_A Leptin receptor; receptor-antibody complex, cytokine receptor,
antibody FAB F immunoglobulin fold; HET: NAG; 1.95A
{Homo sapiens}
Length = 206
Score = 55.1 bits (132), Expect = 3e-08
Identities = 34/195 (17%), Positives = 61/195 (31%), Gaps = 28/195 (14%)
Query: 293 TCTLHWNPPK----YDGGLKVTHY-------VVERRDISMPHWICISTTCHDTTFIVQGL 341
TC W+ + L++ ++ + C + I Q +
Sbjct: 19 TCR--WSTSTIQSLAESTLQLRYHRSSLYCSDIPSIHPISEPKDCYLQSDGFYECIFQPI 76
Query: 342 TEGQEYLFHVMAVNENGMG--PPLEGINPIKAKSPYDKPSPPGIPVVTQVGG-DFVNLSW 398
Y + + G PP + P KP PP + +SW
Sbjct: 77 FLLSGYTMWIRINHSLGSLDSPPTC-VLPDS----VVKPLPPSSVKAEITINIGLLKISW 131
Query: 399 DKPLDDGGS---RIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQ 455
+KP+ + +I+ Y + EV W+ V +++P Y +V +
Sbjct: 132 EKPVFPENNLQFQIR-YGLSGKEVQ---WKMYEVYDAKSKSVSLPVPDLCAVYAVQVRCK 187
Query: 456 NEAGLSLPSSASNSV 470
GL S+ SN
Sbjct: 188 RLDGLGYWSNWSNPA 202
Score = 55.1 bits (132), Expect = 3e-08
Identities = 34/195 (17%), Positives = 61/195 (31%), Gaps = 28/195 (14%)
Query: 1900 TCTLHWNPPK----YDGGLKVTHY-------VVERRDISMPHWICISTTCHDTTFIVQGL 1948
TC W+ + L++ ++ + C + I Q +
Sbjct: 19 TCR--WSTSTIQSLAESTLQLRYHRSSLYCSDIPSIHPISEPKDCYLQSDGFYECIFQPI 76
Query: 1949 TEGQEYLFHVMAVNENGMG--PPLEGINPIKAKSPYDKPSPPGIPVVTQVGG-DFVNLSW 2005
Y + + G PP + P KP PP + +SW
Sbjct: 77 FLLSGYTMWIRINHSLGSLDSPPTC-VLPDS----VVKPLPPSSVKAEITINIGLLKISW 131
Query: 2006 DKPLDDGGS---RIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQ 2062
+KP+ + +I+ Y + EV W+ V +++P Y +V +
Sbjct: 132 EKPVFPENNLQFQIR-YGLSGKEVQ---WKMYEVYDAKSKSVSLPVPDLCAVYAVQVRCK 187
Query: 2063 NEAGLSLPSSASNSV 2077
GL S+ SN
Sbjct: 188 RLDGLGYWSNWSNPA 202
Score = 48.5 bits (115), Expect = 5e-06
Identities = 20/123 (16%), Positives = 42/123 (34%), Gaps = 15/123 (12%)
Query: 647 YRVVAENDLG-MDSAIVKIQISD--RPDPPQFPTVEDIGHDS-LALVWRAPIWDGGSNIT 702
+ + LG +DS + +P PP E + L + W P++ N
Sbjct: 84 MWIRINHSLGSLDSPPTCVLPDSVVKPLPPSSVKAEITINIGLLKISWEKPVF--PENNL 141
Query: 703 NYIVE-KREHPMSSW--IRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGR------SDP 753
+ + W V + + ++++ Y +V + + G S+P
Sbjct: 142 QFQIRYGLSGKEVQWKMYEVYDAKSKSVSLPVPDLCAVYAVQVRCKRLDGLGYWSNWSNP 201
Query: 754 STT 756
+ T
Sbjct: 202 AYT 204
Score = 42.8 bits (100), Expect = 4e-04
Identities = 14/112 (12%), Positives = 28/112 (25%), Gaps = 5/112 (4%)
Query: 254 YTVNLSNSSGSVS---GTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVT 310
+ +++S GS+ + P PP I + W P + +
Sbjct: 84 MWIRINHSLGSLDSPPTCVLPDSVVKPLPPSSVKAEITINIGLLKISWEKPVFPEN-NLQ 142
Query: 311 HYVVERRDISMPHWICISTT-CHDTTFIVQGLTEGQEYLFHVMAVNENGMGP 361
+ W + + Y V +G+G
Sbjct: 143 FQIRYGLSGKEVQWKMYEVYDAKSKSVSLPVPDLCAVYAVQVRCKRLDGLGY 194
Score = 42.8 bits (100), Expect = 4e-04
Identities = 14/112 (12%), Positives = 28/112 (25%), Gaps = 5/112 (4%)
Query: 1861 YTVNLSNSSGSVS---GTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVT 1917
+ +++S GS+ + P PP I + W P + +
Sbjct: 84 MWIRINHSLGSLDSPPTCVLPDSVVKPLPPSSVKAEITINIGLLKISWEKPVFPEN-NLQ 142
Query: 1918 HYVVERRDISMPHWICISTT-CHDTTFIVQGLTEGQEYLFHVMAVNENGMGP 1968
+ W + + Y V +G+G
Sbjct: 143 FQIRYGLSGKEVQWKMYEVYDAKSKSVSLPVPDLCAVYAVQVRCKRLDGLGY 194
Score = 41.6 bits (97), Expect = 0.001
Identities = 26/217 (11%), Positives = 50/217 (23%), Gaps = 48/217 (22%)
Query: 916 DSLTLYWTPPRDNGGSEIT---------NYVVEKKDYNSTVWTKVSSYVTTPF--VRVRN 964
+T W+ +E T Y + + K + F +
Sbjct: 16 TKMTCRWSTSTIQSLAESTLQLRYHRSSLYCSDIPSIHPISEPKDCYLQSDGFYECIFQP 75
Query: 965 LAIGSTYEFRVMAENQYG-LSKPALTIDPIKAKHPFDVPGAPGAPKGVDSTEDSISLVWS 1023
+ + S Y + + G L P + P P P + K + + +
Sbjct: 76 IFLLSGYTMWIRINHSLGSLDSPPTCVLPDSVVK----PLPPSSVKAEITINIGLLKISW 131
Query: 1024 KPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEGKSIGSERGSTAQF 1083
+ + +Q I + +W K +
Sbjct: 132 EKPVFPENNLQFQIRYGLSGKEVQW----------------------KMYEVYDAKSKSV 169
Query: 1084 LELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPWS 1120
+ Y +V G G WS
Sbjct: 170 S----------LPVPDLCAVYAVQVRCKRLDGLGYWS 196
Score = 41.2 bits (96), Expect = 0.001
Identities = 13/85 (15%), Positives = 27/85 (31%), Gaps = 5/85 (5%)
Query: 901 RPHPPENLHAD-EFAGDSLTLYWTPPRDNGGSEITNYVVE-KKDYNSTVWTKVSSY-VTT 957
+P PP ++ A+ L + W P + + + W Y +
Sbjct: 109 KPLPPSSVKAEITINIGLLKISWEKPVFPENNLQ--FQIRYGLSGKEVQWKMYEVYDAKS 166
Query: 958 PFVRVRNLAIGSTYEFRVMAENQYG 982
V + + + Y +V + G
Sbjct: 167 KSVSLPVPDLCAVYAVQVRCKRLDG 191
Score = 40.4 bits (94), Expect = 0.003
Identities = 18/110 (16%), Positives = 38/110 (34%), Gaps = 5/110 (4%)
Query: 1207 SYTIQLVNTVGSDSASCKVYVVD---KPSPPQGPLDVSDITPESCSLSWKPPLDDGGSPI 1263
+ I++ +++GS + + D KP PP I +SW+ P + +
Sbjct: 83 TMWIRINHSLGSLDSPPTCVLPDSVVKPLPPSSVKAEITINIGLLKISWEKP-VFPENNL 141
Query: 1264 TNYVVEKYESATGFWSKLSSF-VRSPAYDVFGLETNRQYRFRVRAENQYG 1312
+ W + +S + + + Y +VR + G
Sbjct: 142 QFQIRYGLSGKEVQWKMYEVYDAKSKSVSLPVPDLCAVYAVQVRCKRLDG 191
Score = 32.7 bits (74), Expect = 0.99
Identities = 16/133 (12%), Positives = 33/133 (24%), Gaps = 21/133 (15%)
Query: 1240 VSDITPESCSLSWKPPLDDGGSPITNYVVEKYESATGF----------WSKLSSFVRSPA 1289
+D + W + + + S+ K
Sbjct: 10 ETDGYLTKMTCRWSTS-TIQSLAESTLQLRYHRSSLYCSDIPSIHPISEPKDCYLQSDGF 68
Query: 1290 YDVF--GLETNRQYRFRVRAENQYG--VSEPLELDNSITAKFPFTVPDPPGQPQI-VDWD 1344
Y+ + Y +R + G S P + K P PP + + +
Sbjct: 69 YECIFQPIFLLSGYTMWIRINHSLGSLDSPPTCVLPDSVVK-----PLPPSSVKAEITIN 123
Query: 1345 TNNATLMWDRPRT 1357
+ W++P
Sbjct: 124 IGLLKISWEKPVF 136
>1k85_A Chitinase A1; fibronectin type III domain, chitin binding domain,
carbohydrase, horizontal gene transfer, hydrolase; NMR
{Bacillus circulans} SCOP: b.1.2.1
Length = 88
Score = 51.9 bits (125), Expect = 4e-08
Identities = 21/88 (23%), Positives = 28/88 (31%), Gaps = 9/88 (10%)
Query: 670 PDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSWIRVGNTRFTTMAI 729
P P S+ L W A +T Y V + TT I
Sbjct: 4 PTAPTNLASTAQTTSSITLSWTAS--TDNVGVTGYDVY------NGTALATTVTGTTATI 55
Query: 730 TGLSPGHQYEFRVYAENVYG-RSDPSTT 756
+GL+ Y F V A++ G S S
Sbjct: 56 SGLAADTSYTFTVKAKDAAGNVSAASNA 83
Score = 50.0 bits (120), Expect = 2e-07
Identities = 25/87 (28%), Positives = 37/87 (42%), Gaps = 11/87 (12%)
Query: 1231 PSPPQGPLDVSDITPESCSLSWKPPLDDGGSPITNYVVEKYESATGFWSKLSSFVRSPAY 1290
P+ P L + T S +LSW D+ G +T Y V Y L++ V
Sbjct: 4 PTAPTN-LASTAQTTSSITLSWTASTDNVG--VTGYDV--YNGTA-----LATTVTGTTA 53
Query: 1291 DVFGLETNRQYRFRVRAENQYG-VSEP 1316
+ GL + Y F V+A++ G VS
Sbjct: 54 TISGLAADTSYTFTVKAKDAAGNVSAA 80
Score = 49.6 bits (119), Expect = 2e-07
Identities = 25/96 (26%), Positives = 37/96 (38%), Gaps = 12/96 (12%)
Query: 378 PSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQI 437
P+ P T + LSW D+ G + GY +V + +
Sbjct: 4 PTAPTNLASTAQTTSSITLSWTASTDNVG--VTGY-----DVYNGT---ALATTVTGTTA 53
Query: 438 NIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIK 473
I L Y F V A++ AG S+ASN+V +K
Sbjct: 54 TISGLAADTSYTFTVKAKDAAGNV--SAASNAVSVK 87
Score = 49.6 bits (119), Expect = 2e-07
Identities = 25/96 (26%), Positives = 37/96 (38%), Gaps = 12/96 (12%)
Query: 1985 PSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQI 2044
P+ P T + LSW D+ G + GY +V + +
Sbjct: 4 PTAPTNLASTAQTTSSITLSWTASTDNVG--VTGY-----DVYNGT---ALATTVTGTTA 53
Query: 2045 NIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIK 2080
I L Y F V A++ AG S+ASN+V +K
Sbjct: 54 TISGLAADTSYTFTVKAKDAAGNV--SAASNAVSVK 87
Score = 48.8 bits (117), Expect = 5e-07
Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 9/81 (11%)
Query: 902 PHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTKVSSYVTTPFVR 961
P P NL + S+TL WT DN G +T Y V + + T V+ T
Sbjct: 4 PTAPTNLASTAQTTSSITLSWTASTDNVG--VTGYDVYN---GTALATTVTGTTAT---- 54
Query: 962 VRNLAIGSTYEFRVMAENQYG 982
+ LA ++Y F V A++ G
Sbjct: 55 ISGLAADTSYTFTVKAKDAAG 75
Score = 48.4 bits (116), Expect = 5e-07
Identities = 23/82 (28%), Positives = 29/82 (35%), Gaps = 10/82 (12%)
Query: 277 PGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHDTTF 336
P P L + T + TL W + G VT Y V +TT TT
Sbjct: 4 PTAPTN-LASTAQTTSSITLSWTASTDNVG--VTGYDVYNGTAL-------ATTVTGTTA 53
Query: 337 IVQGLTEGQEYLFHVMAVNENG 358
+ GL Y F V A + G
Sbjct: 54 TISGLAADTSYTFTVKAKDAAG 75
Score = 48.4 bits (116), Expect = 5e-07
Identities = 23/82 (28%), Positives = 29/82 (35%), Gaps = 10/82 (12%)
Query: 1884 PGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHDTTF 1943
P P L + T + TL W + G VT Y V +TT TT
Sbjct: 4 PTAPTN-LASTAQTTSSITLSWTASTDNVG--VTGYDVYNGTAL-------ATTVTGTTA 53
Query: 1944 IVQGLTEGQEYLFHVMAVNENG 1965
+ GL Y F V A + G
Sbjct: 54 TISGLAADTSYTFTVKAKDAAG 75
Score = 38.4 bits (90), Expect = 0.002
Identities = 24/125 (19%), Positives = 39/125 (31%), Gaps = 44/125 (35%)
Query: 1002 PGAPGAPKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSL 1061
P AP T SI+L W+ + G + Y V
Sbjct: 4 PTAPTNLASTAQTTSSITLSWTASTDNVG--VTGYDVY---------------------- 39
Query: 1062 KYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPWSS 1121
+ + G+TA ++ L + Y F V A +AAG S+
Sbjct: 40 ------NGTALATTVTGTTAT------------ISGLAADTSYTFTVKAKDAAGN--VSA 79
Query: 1122 SSDII 1126
+S+ +
Sbjct: 80 ASNAV 84
Score = 28.4 bits (64), Expect = 6.2
Identities = 8/30 (26%), Positives = 13/30 (43%), Gaps = 1/30 (3%)
Query: 46 SFSVLNLVEGNDYEFRIIAVNAIG-KSEPS 74
+ ++ L Y F + A +A G S S
Sbjct: 52 TATISGLAADTSYTFTVKAKDAAGNVSAAS 81
Score = 28.4 bits (64), Expect = 6.2
Identities = 8/30 (26%), Positives = 13/30 (43%), Gaps = 1/30 (3%)
Query: 1653 SFSVLNLVEGNDYEFRIIAVNAIG-KSEPS 1681
+ ++ L Y F + A +A G S S
Sbjct: 52 TATISGLAADTSYTFTVKAKDAAGNVSAAS 81
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum,
ATP-binding, kinase, nucleoti binding; HET: PTR DRK;
2.65A {Cryptosporidium parvum iowa II}
Length = 383
Score = 56.7 bits (137), Expect = 5e-08
Identities = 23/109 (21%), Positives = 42/109 (38%), Gaps = 4/109 (3%)
Query: 820 DHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQLHHPKL 879
Y + + +GTG+FG+V + ++G FA K + + +E+DIM L H +
Sbjct: 7 KKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVL----QDPRYKNRELDIMKVLDHVNI 62
Query: 880 INLHDAFEDDDEMVLIFEVLDRPHPPENLHADEFAGDSLTLYWTPPRDN 928
I L D F + H + ++ P ++
Sbjct: 63 IKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNK 111
>3pvu_A Beta-adrenergic receptor kinase 1; transferase,
serine/threonine-protein kinase, ATP-binding, I
membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A*
3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A*
1bak_A
Length = 695
Score = 56.8 bits (137), Expect = 7e-08
Identities = 27/134 (20%), Positives = 56/134 (41%), Gaps = 26/134 (19%)
Query: 778 DETGKKIRGKADEKVSDYDQYVFDIYSKYVP--QPVDIKTSSVYDHYDILEEIGTGAFGV 835
+E + +RG +K + D++ K V + + + + + IG G FG
Sbjct: 151 EEICQNLRGDVFQKFIESDKFTRFCQWKNVELNIHLTM------NDFSVHRIIGRGGFGE 204
Query: 836 VHRCRERKTGNIFAAKFIPVSHNLEKELI--RKEID----------IMNQLHHPKLINLH 883
V+ CR+ TG ++A K L+K+ I ++ +++ P ++ +
Sbjct: 205 VYGCRKADTGKMYAMKC------LDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMS 258
Query: 884 DAFEDDDEMVLIFE 897
AF D++ I +
Sbjct: 259 YAFHTPDKLSFILD 272
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural
genomics consortium, SGC, PR kinase,
transferase-antibiotic complex; HET: STU GOL; 1.65A
{Homo sapiens}
Length = 310
Score = 55.0 bits (133), Expect = 1e-07
Identities = 18/74 (24%), Positives = 29/74 (39%)
Query: 824 ILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQLHHPKLINLH 883
E +G G FG + R+TG + K + + KE+ +M L HP ++
Sbjct: 14 HGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFI 73
Query: 884 DAFEDDDEMVLIFE 897
D + I E
Sbjct: 74 GVLYKDKRLNFITE 87
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular
signal regulated kinase 3, serine phosphorylation,
threonine phosphorylation; 2.25A {Homo sapiens}
Length = 320
Score = 55.0 bits (133), Expect = 1e-07
Identities = 14/69 (20%), Positives = 29/69 (42%)
Query: 818 VYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQLHHP 877
+ Y L+ +G G G+V + A K I ++ + +EI I+ +L H
Sbjct: 9 LGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHD 68
Query: 878 KLINLHDAF 886
++ + +
Sbjct: 69 NIVKVFEIL 77
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens}
SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Length = 171
Score = 53.0 bits (127), Expect = 1e-07
Identities = 21/185 (11%), Positives = 49/185 (26%), Gaps = 29/185 (15%)
Query: 98 KDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREI----------SSGARYRVETAGGVFR 147
+ + + +T + P+ + W + ++ S + RV
Sbjct: 3 QQIYGVVYGNVTFHVPS-NVPLKEVLWKKQKDKVAELENSEFRAFSSFKNRVYLDTVSGS 61
Query: 148 LHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFY 207
L +T D +Y E+ N V ++ + + E N +
Sbjct: 62 LTIYNLTSSDEDEYEMESPNITDTMKFFLYV-------LEMVSKPMIYWECSNATLTCEV 114
Query: 208 AGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSG 267
+E+ L + ++S + + + N S
Sbjct: 115 LEGTDVELKLYQGKEHLRSLRQ-----------KTMSYQWTNLRAPFKCKAVNRVSQESE 163
Query: 268 TFTIN 272
+N
Sbjct: 164 MEVVN 168
Score = 53.0 bits (127), Expect = 1e-07
Identities = 21/185 (11%), Positives = 49/185 (26%), Gaps = 29/185 (15%)
Query: 1705 KDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREI----------SSGARYRVETAGGVFR 1754
+ + + +T + P+ + W + ++ S + RV
Sbjct: 3 QQIYGVVYGNVTFHVPS-NVPLKEVLWKKQKDKVAELENSEFRAFSSFKNRVYLDTVSGS 61
Query: 1755 LHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFY 1814
L +T D +Y E+ N V ++ + + E N +
Sbjct: 62 LTIYNLTSSDEDEYEMESPNITDTMKFFLYV-------LEMVSKPMIYWECSNATLTCEV 114
Query: 1815 AGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSG 1874
+E+ L + ++S + + + N S
Sbjct: 115 LEGTDVELKLYQGKEHLRSLRQ-----------KTMSYQWTNLRAPFKCKAVNRVSQESE 163
Query: 1875 TFTIN 1879
+N
Sbjct: 164 MEVVN 168
Score = 51.1 bits (122), Expect = 4e-07
Identities = 25/189 (13%), Positives = 56/189 (29%), Gaps = 34/189 (17%)
Query: 491 NAIQNHNAQFQCTITGCPKPTISWLKGSREIT----------PSARHHIFAEGDTYTLII 540
+ N F P + W K ++ S ++ ++ + + +L I
Sbjct: 6 YGVVYGNVTFHVPSNV-PLKEVLWKKQKDKVAELENSEFRAFSSFKNRVYLDTVSGSLTI 64
Query: 541 NSVYGVDADEYVCRAVNKGGVKSTKAELIIM-TAPKFNVPPRFRDTAYFDKGENVVVKIP 599
++ D DEY + N ++ M + P + N +
Sbjct: 65 YNLTSSDEDEYEMESPNITDTMKFFLYVLEMVSKPMIYW-----------ECSNATLTCE 113
Query: 600 FTGYPKPKITWYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAPYRVVAENDLGMDS 659
++ Y+ E + S T+ AP++ A N + +S
Sbjct: 114 VLEGTDVELKLYQGKEHLRSLRQ-----------KTMSYQWTNLRAPFKCKAVNRVSQES 162
Query: 660 AIVKIQISD 668
+ + +
Sbjct: 163 EMEVVNCPE 171
Score = 37.2 bits (86), Expect = 0.023
Identities = 13/83 (15%), Positives = 27/83 (32%), Gaps = 11/83 (13%)
Query: 2098 NAIQNHNAQFQCTITGCPKPTISWLKGSREIT----------PSARHHIFAEGDTYTLII 2147
+ N F P + W K ++ S ++ ++ + + +L I
Sbjct: 6 YGVVYGNVTFHVPSNV-PLKEVLWKKQKDKVAELENSEFRAFSSFKNRVYLDTVSGSLTI 64
Query: 2148 NSVYGVDADEYVCRAVNKGGVKS 2170
++ D DEY + N
Sbjct: 65 YNLTSSDEDEYEMESPNITDTMK 87
Score = 35.7 bits (82), Expect = 0.068
Identities = 18/89 (20%), Positives = 29/89 (32%), Gaps = 10/89 (11%)
Query: 1431 DITVKAGEDFSIHVPFMAFPQPAAFWFANDSII---DDSDTRVHKQ------LTMNSASL 1481
I + + HVP P W + ++S+ R L S SL
Sbjct: 4 QIYGVVYGNVTFHVPSNV-PLKEVLWKKQKDKVAELENSEFRAFSSFKNRVYLDTVSGSL 62
Query: 1482 VVKNSQRSDGGQYRLQLKNPAGFDTATLH 1510
+ N SD +Y ++ N L+
Sbjct: 63 TIYNLTSSDEDEYEMESPNITDTMKFFLY 91
Score = 34.1 bits (78), Expect = 0.23
Identities = 20/110 (18%), Positives = 35/110 (31%), Gaps = 13/110 (11%)
Query: 1151 GEEFTITVPFSGRPKPTPIWTVNGD---EVSPDGRIKFETSENQTIYRNKSAK------R 1201
T VP S P +W D E+ F + +N+ S
Sbjct: 10 YGNVTFHVP-SNVPLKEVLWKKQKDKVAELENSEFRAFSSFKNRVYLDTVSGSLTIYNLT 68
Query: 1202 ATDSGSYTIQLVNTVGSDSASCKVYVVDKPSPPQGPLDVSDITPESCSLS 1251
++D Y ++ N + V + S P + S+ T +C +
Sbjct: 69 SSDEDEYEMESPNITDTMKFFLYVL--EMVSKPMIYWECSNAT-LTCEVL 115
Score = 33.7 bits (77), Expect = 0.33
Identities = 16/110 (14%), Positives = 36/110 (32%), Gaps = 6/110 (5%)
Query: 193 LYIPEGDNTK-VKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDA 251
++P K V D+ E+ ++ +R + I + D
Sbjct: 15 FHVPSNVPLKEVLWKKQKDKVAELENSEFRAFSSFKNRVYL-DTVSGSLT-IYNLTSSDE 72
Query: 252 GDYTVNLSNSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPP 301
+Y + N + ++ F + + + P+ + S T TC +
Sbjct: 73 DEYEMESPNITDTM--KFFLYVLEMVSKPMIYWECSNATL-TCEVLEGTD 119
Score = 33.7 bits (77), Expect = 0.33
Identities = 16/110 (14%), Positives = 36/110 (32%), Gaps = 6/110 (5%)
Query: 1800 LYIPEGDNTK-VKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDA 1858
++P K V D+ E+ ++ +R + I + D
Sbjct: 15 FHVPSNVPLKEVLWKKQKDKVAELENSEFRAFSSFKNRVYL-DTVSGSLT-IYNLTSSDE 72
Query: 1859 GDYTVNLSNSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPP 1908
+Y + N + ++ F + + + P+ + S T TC +
Sbjct: 73 DEYEMESPNITDTM--KFFLYVLEMVSKPMIYWECSNATL-TCEVLEGTD 119
Score = 33.0 bits (75), Expect = 0.57
Identities = 9/76 (11%), Positives = 23/76 (30%), Gaps = 11/76 (14%)
Query: 2100 IQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYV 2159
+ NA C + + +G + + ++ + +
Sbjct: 103 WECSNATLTCEVLEGTDVELKLYQGKEHLRSLRQ-----------KTMSYQWTNLRAPFK 151
Query: 2160 CRAVNKGGVKSTKAEL 2175
C+AVN+ +S +
Sbjct: 152 CKAVNRVSQESEMEVV 167
>2edy_A Receptor-type tyrosine-protein phosphatase F; LAR protein,
leukocyte antigen related, structural genomics, NPPSFA;
NMR {Homo sapiens}
Length = 103
Score = 50.8 bits (122), Expect = 1e-07
Identities = 29/88 (32%), Positives = 37/88 (42%), Gaps = 6/88 (6%)
Query: 277 PGPPIGPLDVSEITKHTCTLHWNPPKYDG--GLKVTHYVVERRDISMPHWICISTTCHDT 334
G P L V+ +T T L W+PP G ++ Y V RDI+ + TT DT
Sbjct: 9 SGFPQN-LHVTGLTTSTTELAWDPPVLAERNG-RIISYTVVFRDINSQQELQNITT--DT 64
Query: 335 TFIVQGLTEGQEYLFHVMAVNENGMGPP 362
F + GL Y V A G GP
Sbjct: 65 RFTLTGLKPDTTYDIKVRAWTSKGSGPL 92
Score = 50.8 bits (122), Expect = 1e-07
Identities = 29/88 (32%), Positives = 37/88 (42%), Gaps = 6/88 (6%)
Query: 1884 PGPPIGPLDVSEITKHTCTLHWNPPKYDG--GLKVTHYVVERRDISMPHWICISTTCHDT 1941
G P L V+ +T T L W+PP G ++ Y V RDI+ + TT DT
Sbjct: 9 SGFPQN-LHVTGLTTSTTELAWDPPVLAERNG-RIISYTVVFRDINSQQELQNITT--DT 64
Query: 1942 TFIVQGLTEGQEYLFHVMAVNENGMGPP 1969
F + GL Y V A G GP
Sbjct: 65 RFTLTGLKPDTTYDIKVRAWTSKGSGPL 92
Score = 48.1 bits (115), Expect = 1e-06
Identities = 22/91 (24%), Positives = 37/91 (40%), Gaps = 7/91 (7%)
Query: 1229 DKPS-PPQGPLDVSDITPESCSLSWKPPLDDG--GSPITNYVVEKYESATGFWSKLSSFV 1285
PS PQ L V+ +T + L+W PP+ G I +Y V + + + +
Sbjct: 6 SGPSGFPQN-LHVTGLTTSTTELAWDPPVLAERNG-RIISYTVVFRDINSQQELQNITTD 63
Query: 1286 RSPAYDVFGLETNRQYRFRVRAENQYGVSEP 1316
+ + GL+ + Y +VRA G
Sbjct: 64 TR--FTLTGLKPDTTYDIKVRAWTSKGSGPL 92
Score = 48.1 bits (115), Expect = 1e-06
Identities = 22/85 (25%), Positives = 32/85 (37%), Gaps = 4/85 (4%)
Query: 672 PPQFPTVEDIGHDSLALVWRAPIWDGGSN--ITNYIVEKREHPMSSWIRVGNTRFTTMAI 729
PQ V + + L W P+ N I +Y V R+ ++ T T +
Sbjct: 11 FPQNLHVTGLTTSTTELAWDPPVLAE-RNGRIISYTVVFRDINSQQELQNITTD-TRFTL 68
Query: 730 TGLSPGHQYEFRVYAENVYGRSDPS 754
TGL P Y+ +V A G S
Sbjct: 69 TGLKPDTTYDIKVRAWTSKGSGPLS 93
Score = 48.1 bits (115), Expect = 1e-06
Identities = 23/82 (28%), Positives = 33/82 (40%), Gaps = 7/82 (8%)
Query: 904 PPENLHADEFAGDSLTLYWTPPRD---NGGSEITNYVVEKKDYNSTVWTKVSSYVTTPFV 960
P+NLH + L W PP NG I +Y V +D NS + + T
Sbjct: 11 FPQNLHVTGLTTSTTELAWDPPVLAERNG--RIISYTVVFRDINSQQELQNITTDTR--F 66
Query: 961 RVRNLAIGSTYEFRVMAENQYG 982
+ L +TY+ +V A G
Sbjct: 67 TLTGLKPDTTYDIKVRAWTSKG 88
Score = 48.1 bits (115), Expect = 1e-06
Identities = 21/98 (21%), Positives = 33/98 (33%), Gaps = 7/98 (7%)
Query: 371 AKSPYDKPS-PPGIPVVTQVGGDFVNLSWDKPLDDG--GSRIQGYWIDKHEVGSDAWQRV 427
S PS P VT + L+WD P+ G RI Y + ++ S +
Sbjct: 1 GSSGSSGPSGFPQNLHVTGLTTSTTELAWDPPVLAERNG-RIISYTVVFRDINSQQELQN 59
Query: 428 NVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSS 465
++ + L Y+ +V A G S
Sbjct: 60 ITTD---TRFTLTGLKPDTTYDIKVRAWTSKGSGPLSP 94
Score = 48.1 bits (115), Expect = 1e-06
Identities = 21/98 (21%), Positives = 33/98 (33%), Gaps = 7/98 (7%)
Query: 1978 AKSPYDKPS-PPGIPVVTQVGGDFVNLSWDKPLDDG--GSRIQGYWIDKHEVGSDAWQRV 2034
S PS P VT + L+WD P+ G RI Y + ++ S +
Sbjct: 1 GSSGSSGPSGFPQNLHVTGLTTSTTELAWDPPVLAERNG-RIISYTVVFRDINSQQELQN 59
Query: 2035 NVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSS 2072
++ + L Y+ +V A G S
Sbjct: 60 ITTD---TRFTLTGLKPDTTYDIKVRAWTSKGSGPLSP 94
Score = 39.6 bits (93), Expect = 0.001
Identities = 25/126 (19%), Positives = 36/126 (28%), Gaps = 39/126 (30%)
Query: 1000 DVP-GAPGAPKGVDSTEDSISLVWSKPRHDG--GSPIQRYIVEKRLISDDKWIKASMAHI 1056
P G P T + L W P G I Y V R I+ + ++
Sbjct: 6 SGPSGFPQNLHVTGLTTSTTELAWDPPVLAERNG-RIISYTVVFRDINSQQELQNI---- 60
Query: 1057 PDTSLKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQ 1116
T ++ L T L + Y+ +V A + G
Sbjct: 61 -TTDTRFTL------------------------------TGLKPDTTYDIKVRAWTSKGS 89
Query: 1117 GPWSSS 1122
GP S S
Sbjct: 90 GPLSPS 95
Score = 28.0 bits (63), Expect = 9.9
Identities = 12/63 (19%), Positives = 23/63 (36%), Gaps = 7/63 (11%)
Query: 22 YIIERREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIG---KSEPSICTT 78
Y + R++ L+ + F++ L Y+ ++ A + G S T
Sbjct: 44 YTVVFRDINSQQELQ---NITTDTRFTLTGLKPDTTYDIKVRAWTSKGSGPLSPSIQSRT 100
Query: 79 -PV 80
PV
Sbjct: 101 MPV 103
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase;
structural genomics consortium, SGC, transferase; 2.37A
{Cryptosporidium parvum iowa II}
Length = 388
Score = 55.1 bits (133), Expect = 1e-07
Identities = 23/88 (26%), Positives = 53/88 (60%), Gaps = 5/88 (5%)
Query: 818 VYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFI--PVSHNLEKELIRKEIDIMNQLH 875
V Y++++++G GA+G+V + +R+TG + A K I ++ + + +EI I+ +L
Sbjct: 7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELS 66
Query: 876 -HPKLINLHDAF--EDDDEMVLIFEVLD 900
H ++NL + ++D ++ L+F+ ++
Sbjct: 67 GHENIVNLLNVLRADNDRDVYLVFDYME 94
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune
system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A
4f8q_A
Length = 226
Score = 53.6 bits (128), Expect = 2e-07
Identities = 37/236 (15%), Positives = 67/236 (28%), Gaps = 49/236 (20%)
Query: 482 EIIVPLRNANAIQNHNAQFQCTITGCP---KPTISWLKGSRE-----------------I 521
++ P A+ +A C + + W+ S
Sbjct: 6 SVLGPSGPILAMVGEDADLPCHLFPTMSAETMELKWVSSSLRQVVNVYADGKEVEDRQSA 65
Query: 522 TPSARHHIFAEG---DTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNV 578
R I +G L I++V D+ +Y+C + + EL
Sbjct: 66 PYRGRTSILRDGITAGKAALRIHNVTASDSGKYLCYFQDGDFYEKALVEL---KVAALGS 122
Query: 579 PPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVI----------ESGGHFHVETS 628
Y D G ++ + YP+P+I W + + G + V S
Sbjct: 123 DLHVDVKGYKDGGIHLECRST-GWYPQPQIQWSNNKGENIPTVEAPVVADGVGLYAVAAS 181
Query: 629 ERHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQISDRPDPPQFPTVEDIGHD 684
+ +R +S + L I I+D P F + + H
Sbjct: 182 -----VIMRGSSGEG---VSCTIRSSLLGLEKTASISIAD----PFFRSAQHHHHH 225
Score = 45.5 bits (107), Expect = 6e-05
Identities = 16/93 (17%), Positives = 34/93 (36%), Gaps = 3/93 (3%)
Query: 91 PDFIVPLKDLVVPLGKLLTLQCEATG-TPVPKCRWLRN-GREISSGARYRVETAGGVFRL 148
D+ + L+C +TG P P+ +W N G I + V G++ +
Sbjct: 119 ALGSDLHVDVKGYKDGGIHLECRSTGWYPQPQIQWSNNKGENIPTVEAPVVADGVGLYAV 178
Query: 149 HFN-EVTDVDNGDYTCEAYNSVGFAHTSSRVKI 180
+ + +C +S+ ++ + I
Sbjct: 179 AASVIMRGSSGEGVSCTIRSSLLGLEKTASISI 211
Score = 45.5 bits (107), Expect = 6e-05
Identities = 16/93 (17%), Positives = 34/93 (36%), Gaps = 3/93 (3%)
Query: 1698 PDFIVPLKDLVVPLGKLLTLQCEATG-TPVPKCRWLRN-GREISSGARYRVETAGGVFRL 1755
D+ + L+C +TG P P+ +W N G I + V G++ +
Sbjct: 119 ALGSDLHVDVKGYKDGGIHLECRSTGWYPQPQIQWSNNKGENIPTVEAPVVADGVGLYAV 178
Query: 1756 HFN-EVTDVDNGDYTCEAYNSVGFAHTSSRVKI 1787
+ + +C +S+ ++ + I
Sbjct: 179 AASVIMRGSSGEGVSCTIRSSLLGLEKTASISI 211
Score = 40.5 bits (94), Expect = 0.003
Identities = 17/95 (17%), Positives = 31/95 (32%), Gaps = 3/95 (3%)
Query: 479 KAPEIIVPLRNANAIQNHNAQFQCTITGC-PKPTISWLKGSREITPSARHHIFAEGD-TY 536
A + ++ +C TG P+P I W E P+ + A+G Y
Sbjct: 117 VAALGSDLHVDVKGYKDGGIHLECRSTGWYPQPQIQWSNNKGENIPTVEAPVVADGVGLY 176
Query: 537 TLIINSVYGVDADE-YVCRAVNKGGVKSTKAELII 570
+ + + + E C + A + I
Sbjct: 177 AVAASVIMRGSSGEGVSCTIRSSLLGLEKTASISI 211
Score = 40.5 bits (94), Expect = 0.003
Identities = 17/95 (17%), Positives = 31/95 (32%), Gaps = 3/95 (3%)
Query: 2086 KAPEIIVPLRNANAIQNHNAQFQCTITGC-PKPTISWLKGSREITPSARHHIFAEGD-TY 2143
A + ++ +C TG P+P I W E P+ + A+G Y
Sbjct: 117 VAALGSDLHVDVKGYKDGGIHLECRSTGWYPQPQIQWSNNKGENIPTVEAPVVADGVGLY 176
Query: 2144 TLIINSVYGVDADE-YVCRAVNKGGVKSTKAELII 2177
+ + + + E C + A + I
Sbjct: 177 AVAASVIMRGSSGEGVSCTIRSSLLGLEKTASISI 211
Score = 39.3 bits (91), Expect = 0.008
Identities = 29/207 (14%), Positives = 62/207 (29%), Gaps = 28/207 (13%)
Query: 94 IVPLKDLVVPLGKLLTLQCEATGTPVPKC---RWLR-----------NGREI----SSGA 135
+ P ++ +G+ L C T + +W+ +G+E+ S+
Sbjct: 8 LGPSGPILAMVGEDADLPCHLFPTMSAETMELKWVSSSLRQVVNVYADGKEVEDRQSAPY 67
Query: 136 RYRV-----ETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMP 190
R R G L + VT D+G Y C + + +K+ +
Sbjct: 68 RGRTSILRDGITAGKAALRIHNVTASDSGKYLCYFQDGDFYEKALVELKVAALGSDLHVD 127
Query: 191 NALYIPEGDNTKVKIFYAGDQP-MEVSLTKNGRVVQSDDRFKFTVLDD--YIIIFIKEIR 247
+ ++ G P ++ + N Y + +R
Sbjct: 128 VK--GYKDGGIHLECRSTGWYPQPQIQWSNNKGENIPTVEAPVVADGVGLYAVAASVIMR 185
Query: 248 KEDAGDYTVNLSNSSGSVSGTFTINIT 274
+ + +S + T +I+I
Sbjct: 186 GSSGEGVSCTIRSSLLGLEKTASISIA 212
Score = 39.3 bits (91), Expect = 0.008
Identities = 29/207 (14%), Positives = 62/207 (29%), Gaps = 28/207 (13%)
Query: 1701 IVPLKDLVVPLGKLLTLQCEATGTPVPKC---RWLR-----------NGREI----SSGA 1742
+ P ++ +G+ L C T + +W+ +G+E+ S+
Sbjct: 8 LGPSGPILAMVGEDADLPCHLFPTMSAETMELKWVSSSLRQVVNVYADGKEVEDRQSAPY 67
Query: 1743 RYRV-----ETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMP 1797
R R G L + VT D+G Y C + + +K+ +
Sbjct: 68 RGRTSILRDGITAGKAALRIHNVTASDSGKYLCYFQDGDFYEKALVELKVAALGSDLHVD 127
Query: 1798 NALYIPEGDNTKVKIFYAGDQP-MEVSLTKNGRVVQSDDRFKFTVLDD--YIIIFIKEIR 1854
+ ++ G P ++ + N Y + +R
Sbjct: 128 VK--GYKDGGIHLECRSTGWYPQPQIQWSNNKGENIPTVEAPVVADGVGLYAVAASVIMR 185
Query: 1855 KEDAGDYTVNLSNSSGSVSGTFTINIT 1881
+ + +S + T +I+I
Sbjct: 186 GSSGEGVSCTIRSSLLGLEKTASISIA 212
Score = 30.8 bits (69), Expect = 4.3
Identities = 10/66 (15%), Positives = 24/66 (36%), Gaps = 2/66 (3%)
Query: 1468 TRVHKQLTMNSASLVVKNSQRSDGGQYRLQLKNPAGFDTATLHSRLRTLPDSVNPRCHLP 1527
+ + +T A+L + N SD G+Y ++ ++ A + L+ + +
Sbjct: 72 SILRDGITAGKAALRIHNVTASDSGKYLCYFQDGDFYEKALVE--LKVAALGSDLHVDVK 129
Query: 1528 SSTSKE 1533
Sbjct: 130 GYKDGG 135
Score = 30.4 bits (68), Expect = 5.0
Identities = 17/91 (18%), Positives = 28/91 (30%), Gaps = 8/91 (8%)
Query: 1201 RATDSGSYTIQLVNTVGSDSASCKVYVVDKPSPPQGPLDV---SDITPESCSLSWKPP-- 1255
A+DSG Y + + A ++ V S + I E S W P
Sbjct: 91 TASDSGKYLCYFQDGDFYEKALVELKVAALGSDLHVDVKGYKDGGIHLECRSTGWYPQPQ 150
Query: 1256 ---LDDGGSPITNYVVEKYESATGFWSKLSS 1283
++ G I G ++ +S
Sbjct: 151 IQWSNNKGENIPTVEAPVVADGVGLYAVAAS 181
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein
coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl
ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB:
3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Length = 543
Score = 54.8 bits (132), Expect = 3e-07
Identities = 22/87 (25%), Positives = 39/87 (44%), Gaps = 15/87 (17%)
Query: 820 DHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELI--RKEID-------I 870
D + +G G FG V C+ + TG ++A K L K+ + RK I
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKK------LNKKRLKKRKGYQGAMVEKKI 238
Query: 871 MNQLHHPKLINLHDAFEDDDEMVLIFE 897
+ ++H +++L AFE ++ L+
Sbjct: 239 LAKVHSRFIVSLAYAFETKTDLCLVMT 265
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold,
natural killer cell receptor, immune SY; HET: NAG; 1.80A
{Homo sapiens} PDB: 1im9_D
Length = 316
Score = 53.7 bits (129), Expect = 3e-07
Identities = 37/195 (18%), Positives = 53/195 (27%), Gaps = 23/195 (11%)
Query: 101 VVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGD 160
VVP G +TL+C + R R+ + + VT G+
Sbjct: 34 VVPRGGHVTLRCHYR-HRFNNFMLYKEDRIHIPIFHGRIFQE----SFNMSPVTTAHAGN 88
Query: 161 YTCEAYNSVGFAHTSSRVKIGT--------PPRIDRMPNALYIPEGDNTKVKIFYAGD-Q 211
YTC + S+ P + P L + G+ V + D
Sbjct: 89 YTCRGSHPHSPTGWSAPSNPVVIMVTGNHRKPSLLAHPGPL-VKSGER--VILQCWSDIM 145
Query: 212 PMEVSLTKNGRVVQSDDRFKFTVLDDYIIIF-IKEIRKEDAGDYT----VNLSNSSGSV- 265
L K G F I + AG Y V + S
Sbjct: 146 FEHFFLHKEGISKDPSRLVGQIHDGVSKANFSIGPMMLALAGTYRCYGSVTHTPYQLSAP 205
Query: 266 SGTFTINITGLPGPP 280
S I +TG P
Sbjct: 206 SDPLDIVVTGPYEKP 220
Score = 53.7 bits (129), Expect = 3e-07
Identities = 37/195 (18%), Positives = 53/195 (27%), Gaps = 23/195 (11%)
Query: 1708 VVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGD 1767
VVP G +TL+C + R R+ + + VT G+
Sbjct: 34 VVPRGGHVTLRCHYR-HRFNNFMLYKEDRIHIPIFHGRIFQE----SFNMSPVTTAHAGN 88
Query: 1768 YTCEAYNSVGFAHTSSRVKIGT--------PPRIDRMPNALYIPEGDNTKVKIFYAGD-Q 1818
YTC + S+ P + P L + G+ V + D
Sbjct: 89 YTCRGSHPHSPTGWSAPSNPVVIMVTGNHRKPSLLAHPGPL-VKSGER--VILQCWSDIM 145
Query: 1819 PMEVSLTKNGRVVQSDDRFKFTVLDDYIIIF-IKEIRKEDAGDYT----VNLSNSSGSV- 1872
L K G F I + AG Y V + S
Sbjct: 146 FEHFFLHKEGISKDPSRLVGQIHDGVSKANFSIGPMMLALAGTYRCYGSVTHTPYQLSAP 205
Query: 1873 SGTFTINITGLPGPP 1887
S I +TG P
Sbjct: 206 SDPLDIVVTGPYEKP 220
Score = 37.5 bits (87), Expect = 0.044
Identities = 17/142 (11%), Positives = 36/142 (25%), Gaps = 12/142 (8%)
Query: 90 KPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVF--R 147
+ ++ +V G+ + LQC + + G R + GV
Sbjct: 118 RKPSLLAHPGPLVKSGERVILQCWSDIMFE-HFFLHKEGISKDPS-RLVGQIHDGVSKAN 175
Query: 148 LHFNEVTDVDNGDYTCEAYNSVGFAHTSSR-------VKIGTPPRIDRMPNALYIPEGDN 200
+ G Y C + S+ V + G++
Sbjct: 176 FSIGPMMLALAGTYRCYGSVTHTPYQLSAPSDPLDIVVTGPYEKPSLSAQPGPKVQAGES 235
Query: 201 TKVKIFYAGDQPMEVSLTKNGR 222
+ + L++ G
Sbjct: 236 VTLSC-SSRSSYDMYHLSREGG 256
Score = 37.5 bits (87), Expect = 0.044
Identities = 17/142 (11%), Positives = 36/142 (25%), Gaps = 12/142 (8%)
Query: 1697 KPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVF--R 1754
+ ++ +V G+ + LQC + + G R + GV
Sbjct: 118 RKPSLLAHPGPLVKSGERVILQCWSDIMFE-HFFLHKEGISKDPS-RLVGQIHDGVSKAN 175
Query: 1755 LHFNEVTDVDNGDYTCEAYNSVGFAHTSSR-------VKIGTPPRIDRMPNALYIPEGDN 1807
+ G Y C + S+ V + G++
Sbjct: 176 FSIGPMMLALAGTYRCYGSVTHTPYQLSAPSDPLDIVVTGPYEKPSLSAQPGPKVQAGES 235
Query: 1808 TKVKIFYAGDQPMEVSLTKNGR 1829
+ + L++ G
Sbjct: 236 VTLSC-SSRSSYDMYHLSREGG 256
Score = 36.0 bits (83), Expect = 0.11
Identities = 13/68 (19%), Positives = 18/68 (26%), Gaps = 2/68 (2%)
Query: 101 VVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGD 160
V G+ +TL C + + R G V F+ F G
Sbjct: 229 KVQAGESVTLSCSSRSSYDM-YHLSREGGAHERR-LPAVRKVNRTFQADFPLGPATHGGT 286
Query: 161 YTCEAYNS 168
Y C
Sbjct: 287 YRCFGSFR 294
Score = 36.0 bits (83), Expect = 0.11
Identities = 13/68 (19%), Positives = 18/68 (26%), Gaps = 2/68 (2%)
Query: 1708 VVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGD 1767
V G+ +TL C + + R G V F+ F G
Sbjct: 229 KVQAGESVTLSCSSRSSYDM-YHLSREGGAHERR-LPAVRKVNRTFQADFPLGPATHGGT 286
Query: 1768 YTCEAYNS 1775
Y C
Sbjct: 287 YRCFGSFR 294
>1x5h_A Neogenin; RGM binding, fibronectin type III domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
b.1.2.1
Length = 132
Score = 50.4 bits (121), Expect = 3e-07
Identities = 25/114 (21%), Positives = 44/114 (38%), Gaps = 10/114 (8%)
Query: 278 GPPIGPLDVSEITKHTCTLHWNPPKYD---GGLKVTHYVVE-RRDISMPHWICISTTCHD 333
P L + + +HW PP G ++T Y + R+ +
Sbjct: 20 AAPQN-LSLEVRNSKSIMIHWQPPAPATQNG--QITGYKIRYRKASRKSDVTETLVSGTQ 76
Query: 334 TTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVT 387
+ +++GL G EY F V A+ NG GP + + A++ +P V+
Sbjct: 77 LSQLIEGLDRGTEYNFRVAALTINGTGPATD---WLSAETFESDLDETRVPEVS 127
Score = 50.4 bits (121), Expect = 3e-07
Identities = 25/114 (21%), Positives = 44/114 (38%), Gaps = 10/114 (8%)
Query: 1885 GPPIGPLDVSEITKHTCTLHWNPPKYD---GGLKVTHYVVE-RRDISMPHWICISTTCHD 1940
P L + + +HW PP G ++T Y + R+ +
Sbjct: 20 AAPQN-LSLEVRNSKSIMIHWQPPAPATQNG--QITGYKIRYRKASRKSDVTETLVSGTQ 76
Query: 1941 TTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVT 1994
+ +++GL G EY F V A+ NG GP + + A++ +P V+
Sbjct: 77 LSQLIEGLDRGTEYNFRVAALTINGTGPATD---WLSAETFESDLDETRVPEVS 127
Score = 48.1 bits (115), Expect = 2e-06
Identities = 27/135 (20%), Positives = 43/135 (31%), Gaps = 12/135 (8%)
Query: 358 GMGPPLEGINPIKAKSPYDKPS-PPGIPVVTQVGGDFVNLSWDKPLDD---GGSRIQGYW 413
G + ++ D PS P + + + W P G +I GY
Sbjct: 1 GSSGSS---GDVAVRTLSDVPSAAPQNLSLEVRNSKSIMIHWQPPAPATQNG--QITGYK 55
Query: 414 IDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIK 473
I + + + I L G +Y FRV A G P++ S +
Sbjct: 56 IRYRKASRKSDVTETLVSGTQLSQLIEGLDRGTEYNFRVAALTINGTG-PATDWLSAETF 114
Query: 474 --DPMAAKAPEIIVP 486
D + PE+ P
Sbjct: 115 ESDLDETRVPEVSGP 129
Score = 48.1 bits (115), Expect = 2e-06
Identities = 27/135 (20%), Positives = 43/135 (31%), Gaps = 12/135 (8%)
Query: 1965 GMGPPLEGINPIKAKSPYDKPS-PPGIPVVTQVGGDFVNLSWDKPLDD---GGSRIQGYW 2020
G + ++ D PS P + + + W P G +I GY
Sbjct: 1 GSSGSS---GDVAVRTLSDVPSAAPQNLSLEVRNSKSIMIHWQPPAPATQNG--QITGYK 55
Query: 2021 IDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIK 2080
I + + + I L G +Y FRV A G P++ S +
Sbjct: 56 IRYRKASRKSDVTETLVSGTQLSQLIEGLDRGTEYNFRVAALTINGTG-PATDWLSAETF 114
Query: 2081 --DPMAAKAPEIIVP 2093
D + PE+ P
Sbjct: 115 ESDLDETRVPEVSGP 129
Score = 46.6 bits (111), Expect = 8e-06
Identities = 29/136 (21%), Positives = 47/136 (34%), Gaps = 23/136 (16%)
Query: 1217 GSDSASCKVYVV-DKPS-PPQGPLDVSDITPESCSLSWKPPLDD---GGSPITNYVVEKY 1271
S V + D PS PQ L + +S + W+PP G IT Y + +Y
Sbjct: 3 SGSSGDVAVRTLSDVPSAAPQN-LSLEVRNSKSIMIHWQPPAPATQNG--QITGYKI-RY 58
Query: 1272 ESATGFWSKLSSFVRSPA--YDVFGLETNRQYRFRVRAENQYGV---SEPLELDNSITAK 1326
A+ + V + GL+ +Y FRV A G ++ L
Sbjct: 59 RKASRKSDVTETLVSGTQLSQLIEGLDRGTEYNFRVAALTINGTGPATDWLSA------- 111
Query: 1327 FPFTVPDPPGQPQIVD 1342
T + ++ +
Sbjct: 112 --ETFESDLDETRVPE 125
Score = 46.2 bits (110), Expect = 1e-05
Identities = 26/110 (23%), Positives = 41/110 (37%), Gaps = 9/110 (8%)
Query: 904 PPENLHADEFAGDSLTLYWTPP---RDNGGSEITNYVVE-KKDYNSTVWTKVSSYVTTPF 959
P+NL + S+ ++W PP NG +IT Y + +K + T+ T
Sbjct: 21 APQNLSLEVRNSKSIMIHWQPPAPATQNG--QITGYKIRYRKASRKSDVTETLVSGTQLS 78
Query: 960 VRVRNLAIGSTYEFRVMAENQYGLSKPALTIDPIKAKHPFDVPGAPGAPK 1009
+ L G+ Y FRV A G D + A+ P+
Sbjct: 79 QLIEGLDRGTEYNFRVAALTINGTGPAT---DWLSAETFESDLDETRVPE 125
Score = 45.8 bits (109), Expect = 1e-05
Identities = 28/117 (23%), Positives = 46/117 (39%), Gaps = 11/117 (9%)
Query: 656 GMDSAIVKIQ-ISDRPD-PPQFPTVEDIGHDSLALVWRAPIWDGGSN--ITNYIV----E 707
S V ++ +SD P PQ ++E S+ + W+ P N IT Y +
Sbjct: 3 SGSSGDVAVRTLSDVPSAAPQNLSLEVRNSKSIMIHWQPPAPAT-QNGQITGYKIRYRKA 61
Query: 708 KREHPMSSWIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKD 764
R+ ++ + G + I GL G +Y FRV A + G + T +
Sbjct: 62 SRKSDVTETLVSGTQ--LSQLIEGLDRGTEYNFRVAALTINGTGPATDWLSAETFES 116
Score = 37.0 bits (86), Expect = 0.014
Identities = 10/28 (35%), Positives = 13/28 (46%)
Query: 1094 RVTSLIENHEYEFRVCAVNAAGQGPWSS 1121
+ L EY FRV A+ G GP +
Sbjct: 80 LIEGLDRGTEYNFRVAALTINGTGPATD 107
>3qyz_A Mitogen-activated protein kinase 1; transferase,
serine/threonine-protein kinase, ATP-binding CE
phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus
norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A*
4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A
3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A*
2oji_A* ...
Length = 364
Score = 53.8 bits (130), Expect = 3e-07
Identities = 21/89 (23%), Positives = 39/89 (43%), Gaps = 6/89 (6%)
Query: 818 VYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFI-PVSHNLEKELIRKEIDIMNQLHH 876
V Y L IG GA+G+V + A K I P H + +EI I+ + H
Sbjct: 25 VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRH 84
Query: 877 PKLINLHDAF-----EDDDEMVLIFEVLD 900
+I ++D E ++ ++ ++++
Sbjct: 85 ENIIGINDIIRAPTIEQMKDVYIVQDLME 113
>3og6_B Interleukin 28 receptor, alpha (interferon, lambd receptor);
helical bundle, fibronectin type III domain,
beta-sandwich, signaling, membrane; HET: BMA NAG; 2.10A
{Homo sapiens} PDB: 3og4_B*
Length = 226
Score = 52.4 bits (125), Expect = 3e-07
Identities = 27/200 (13%), Positives = 51/200 (25%), Gaps = 21/200 (10%)
Query: 295 TLHWNPPKYDGGLKVTHYVVERRDISMP-HWI----CISTT---CHDTTFIVQGLTEGQE 346
L W P + Y V + W C T C Q L +
Sbjct: 22 YLTWLPGLGNPQD--VTYFVAYQSSPTRRRWREVEECAGTKELLCSMMCLKKQDLYN--K 77
Query: 347 YLFHVMAVNENGMGPPLEGINPIKAKSPYD--KPSPPGIPVVTQVGGDFVNLSWDKPLDD 404
+ V V+ + P +E + +P+PP + + N ++ P
Sbjct: 78 FKGRVRTVSPSSKSPWVE----SEYLDYLFEVEPAPPVLVLTQTEEILSANATYQLPPCM 133
Query: 405 GGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPS 464
++ Y + + G+ V + + S
Sbjct: 134 PPLDLK-YEVAFWKEGAGNKTLFPVTPHGQPVQITLQPAASEHHCLSARTIYTFSVPKYS 192
Query: 465 SASNS--VQIKDPMAAKAPE 482
S ++ P A +
Sbjct: 193 KFSKPTCFLLEVPEANASGS 212
Score = 52.4 bits (125), Expect = 3e-07
Identities = 27/200 (13%), Positives = 51/200 (25%), Gaps = 21/200 (10%)
Query: 1902 TLHWNPPKYDGGLKVTHYVVERRDISMP-HWI----CISTT---CHDTTFIVQGLTEGQE 1953
L W P + Y V + W C T C Q L +
Sbjct: 22 YLTWLPGLGNPQD--VTYFVAYQSSPTRRRWREVEECAGTKELLCSMMCLKKQDLYN--K 77
Query: 1954 YLFHVMAVNENGMGPPLEGINPIKAKSPYD--KPSPPGIPVVTQVGGDFVNLSWDKPLDD 2011
+ V V+ + P +E + +P+PP + + N ++ P
Sbjct: 78 FKGRVRTVSPSSKSPWVE----SEYLDYLFEVEPAPPVLVLTQTEEILSANATYQLPPCM 133
Query: 2012 GGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPS 2071
++ Y + + G+ V + + S
Sbjct: 134 PPLDLK-YEVAFWKEGAGNKTLFPVTPHGQPVQITLQPAASEHHCLSARTIYTFSVPKYS 192
Query: 2072 SASNS--VQIKDPMAAKAPE 2089
S ++ P A +
Sbjct: 193 KFSKPTCFLLEVPEANASGS 212
Score = 37.0 bits (85), Expect = 0.048
Identities = 25/165 (15%), Positives = 48/165 (29%), Gaps = 30/165 (18%)
Query: 1250 LSWKPPLDDGGSPITNYVVE-KYESATGFWSKLSSFVRSPA-----YDVFGLETNRQYRF 1303
L+W P G Y V + W ++ + + + +++
Sbjct: 23 LTWLPG--LGNPQDVTYFVAYQSSPTRRRWREVEECAGTKELLCSMMCLKKQDLYNKFKG 80
Query: 1304 RVRAENQYGVSEPLELDNSITAKFPFTVPD-PPGQPQIVDWDTNNA---TLMWDRPRTDG 1359
RVR + S +E +++ + + P P +V T + P
Sbjct: 81 RVRTVSPSSKSPWVE------SEYLDYLFEVEPAPPVLVLTQTEEILSANATYQLPPCMP 134
Query: 1360 G----------SKIQGYKMLLKTPTGELPTTIWSKIRPTSSTVYC 1394
+ G K L P I + P +S +C
Sbjct: 135 PLDLKYEVAFWKEGAGNKTLFPVTPHGQPVQITLQ--PAASEHHC 177
Score = 35.4 bits (81), Expect = 0.12
Identities = 18/101 (17%), Positives = 31/101 (30%), Gaps = 10/101 (9%)
Query: 672 PPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVE-KREHPMSSWIRVGNTRFTT---- 726
PPQ T+ + S+ L W G Y V + W V T
Sbjct: 8 PPQNVTLLSQ-NFSVYLTWLPG--LGNPQDVTYFVAYQSSPTRRRWREVEECAGTKELLC 64
Query: 727 --MAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKDT 765
M + ++++ RV + +S + L +
Sbjct: 65 SMMCLKKQDLYNKFKGRVRTVSPSSKSPWVESEYLDYLFEV 105
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase,
ATP binding, phosphoryla transferase; HET: ATP; 1.75A
{Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Length = 289
Score = 53.1 bits (128), Expect = 3e-07
Identities = 16/82 (19%), Positives = 29/82 (35%), Gaps = 9/82 (10%)
Query: 824 ILEEIGTGAFGVVHRCRERKTGNIFAAKFIPV--------SHNLEKELIRKEIDIMNQLH 875
E +G G F + + R+ G+ V N + +M++L
Sbjct: 12 FNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFE-AASMMSKLS 70
Query: 876 HPKLINLHDAFEDDDEMVLIFE 897
H L+ + DE +L+ E
Sbjct: 71 HKHLVLNYGVCVCGDENILVQE 92
>2edn_A Myosin-binding protein C, fast-type; beta-sandwich, IG-fold, fast
MYBP-C, C-protein, skeletal muscle fast isoform,
structural genomics, NPPSFA; NMR {Homo sapiens}
Length = 118
Score = 49.8 bits (118), Expect = 4e-07
Identities = 17/103 (16%), Positives = 30/103 (29%), Gaps = 12/103 (11%)
Query: 93 FIVPLKDLVVPLGKLLTLQCEATGTPV---PKCRWLR---------NGREISSGARYRVE 140
F+ + V GK + + G + P +W + +G S +
Sbjct: 15 FLKKPDSVSVETGKDAVVVAKVNGKELPDKPTIKWFKGKWLELGSKSGARFSFKESHNSA 74
Query: 141 TAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTP 183
+ LH +V D G Y E + + P
Sbjct: 75 SNVYTVELHIGKVVLGDRGYYRLEVKAKDTCDSCGFNIDVEAP 117
Score = 49.8 bits (118), Expect = 4e-07
Identities = 17/103 (16%), Positives = 30/103 (29%), Gaps = 12/103 (11%)
Query: 1700 FIVPLKDLVVPLGKLLTLQCEATGTPV---PKCRWLR---------NGREISSGARYRVE 1747
F+ + V GK + + G + P +W + +G S +
Sbjct: 15 FLKKPDSVSVETGKDAVVVAKVNGKELPDKPTIKWFKGKWLELGSKSGARFSFKESHNSA 74
Query: 1748 TAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTP 1790
+ LH +V D G Y E + + P
Sbjct: 75 SNVYTVELHIGKVVLGDRGYYRLEVKAKDTCDSCGFNIDVEAP 117
Score = 45.2 bits (106), Expect = 2e-05
Identities = 21/104 (20%), Positives = 30/104 (28%), Gaps = 13/104 (12%)
Query: 484 IVPLRNANAIQNHNAQFQCTITGCP---KPTISWLKGSR---EITPSARHHIFAEGD--- 534
+ + + +A + G KPTI W KG AR +
Sbjct: 16 LKKPDSVSVETGKDAVVVAKVNGKELPDKPTIKWFKGKWLELGSKSGARFSFKESHNSAS 75
Query: 535 ---TYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPK 575
T L I V D Y K S + + AP+
Sbjct: 76 NVYTVELHIGKVVLGDRGYYRLEVKAKDTCDSCGFNIDV-EAPR 118
Score = 45.2 bits (106), Expect = 2e-05
Identities = 21/104 (20%), Positives = 30/104 (28%), Gaps = 13/104 (12%)
Query: 2091 IVPLRNANAIQNHNAQFQCTITGCP---KPTISWLKGSR---EITPSARHHIFAEGD--- 2141
+ + + +A + G KPTI W KG AR +
Sbjct: 16 LKKPDSVSVETGKDAVVVAKVNGKELPDKPTIKWFKGKWLELGSKSGARFSFKESHNSAS 75
Query: 2142 ---TYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPK 2182
T L I V D Y K S + + AP+
Sbjct: 76 NVYTVELHIGKVVLGDRGYYRLEVKAKDTCDSCGFNIDV-EAPR 118
Score = 40.6 bits (94), Expect = 8e-04
Identities = 19/89 (21%), Positives = 30/89 (33%), Gaps = 12/89 (13%)
Query: 590 KGENVVVKIPFTGYP---KPKITWYRDN---EVIESGGHFHVE------TSERHAILTIR 637
G++ VV G KP I W++ +SG F + ++ L I
Sbjct: 26 TGKDAVVVAKVNGKELPDKPTIKWFKGKWLELGSKSGARFSFKESHNSASNVYTVELHIG 85
Query: 638 DASNVDTAPYRVVAENDLGMDSAIVKIQI 666
D YR+ + DS I +
Sbjct: 86 KVVLGDRGYYRLEVKAKDTCDSCGFNIDV 114
Score = 35.9 bits (82), Expect = 0.033
Identities = 15/92 (16%), Positives = 30/92 (32%), Gaps = 11/92 (11%)
Query: 1430 RDITVKAGEDFSIHVPFMAFP---QPAAFWFANDSIIDDSDTRVHKQL--------TMNS 1478
++V+ G+D + +P WF + S + + +
Sbjct: 20 DSVSVETGKDAVVVAKVNGKELPDKPTIKWFKGKWLELGSKSGARFSFKESHNSASNVYT 79
Query: 1479 ASLVVKNSQRSDGGQYRLQLKNPAGFDTATLH 1510
L + D G YRL++K D+ +
Sbjct: 80 VELHIGKVVLGDRGYYRLEVKAKDTCDSCGFN 111
Score = 34.4 bits (78), Expect = 0.11
Identities = 18/95 (18%), Positives = 32/95 (33%), Gaps = 11/95 (11%)
Query: 1144 RDMTVLAGEEFTITVPFSGRP---KPTPIW---TVNGDEVSPDGRIKFETSENQ-----T 1192
++V G++ + +G+ KPT W R F+ S N T
Sbjct: 20 DSVSVETGKDAVVVAKVNGKELPDKPTIKWFKGKWLELGSKSGARFSFKESHNSASNVYT 79
Query: 1193 IYRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYV 1227
+ + D G Y +++ DS + V
Sbjct: 80 VELHIGKVVLGDRGYYRLEVKAKDTCDSCGFNIDV 114
Score = 31.7 bits (71), Expect = 0.97
Identities = 13/96 (13%), Positives = 31/96 (32%), Gaps = 12/96 (12%)
Query: 190 PNALYIPEGDNTKVKIFYAGDQ---PMEVS---------LTKNGRVVQSDDRFKFTVLDD 237
P+++ + G + V G + + +K+G +
Sbjct: 19 PDSVSVETGKDAVVVAKVNGKELPDKPTIKWFKGKWLELGSKSGARFSFKESHNSASNVY 78
Query: 238 YIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINI 273
+ + I ++ D G Y + + S F I++
Sbjct: 79 TVELHIGKVVLGDRGYYRLEVKAKDTCDSCGFNIDV 114
Score = 31.7 bits (71), Expect = 0.97
Identities = 13/96 (13%), Positives = 31/96 (32%), Gaps = 12/96 (12%)
Query: 1797 PNALYIPEGDNTKVKIFYAGDQ---PMEVS---------LTKNGRVVQSDDRFKFTVLDD 1844
P+++ + G + V G + + +K+G +
Sbjct: 19 PDSVSVETGKDAVVVAKVNGKELPDKPTIKWFKGKWLELGSKSGARFSFKESHNSASNVY 78
Query: 1845 YIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINI 1880
+ + I ++ D G Y + + S F I++
Sbjct: 79 TVELHIGKVVLGDRGYYRLEVKAKDTCDSCGFNIDV 114
>1mq8_A ICAM-1, intercellular adhesion molecule-1, CD54 antigen; IG
superfamily, rossmann fold, metal mediated protein
interf immune system; HET: NAG; 3.30A {Homo sapiens}
SCOP: b.1.1.3 b.1.1.4
Length = 291
Score = 52.9 bits (126), Expect = 4e-07
Identities = 30/208 (14%), Positives = 55/208 (26%), Gaps = 23/208 (11%)
Query: 91 PDFIVPLKDLVVPLGKLLTLQCEATG-TPVPKC--RWLRNGREISSGARYRVETAGGVFR 147
+ P+GK LTL+C+ G P LR +E+ R
Sbjct: 87 ERVELAPLPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELK---REPAVGEPAEVT 143
Query: 148 LHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGT---------PPRIDRMPNALYIPEG 198
D +++C + P ++ + +
Sbjct: 144 TTVLVRRDHHGANFSCRTELDLRPQGLELFENTSAPYQLQTFVLPATPPQLVSPRVLEVD 203
Query: 199 DNTKVKIFYAGDQP---MEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYT 255
V G P +V L + + + D + + ED G
Sbjct: 204 TQGTVVCSLDGLFPVSEAQVHLALGDQRLNPTVTYGN---DSFSAKASVSVTAEDEGTQR 260
Query: 256 V--NLSNSSGSVSGTFTINITGLPGPPI 281
+ + + S T+ I P P +
Sbjct: 261 LTCAVILGNQSQETLQTVTIYSFPAPNV 288
Score = 52.9 bits (126), Expect = 4e-07
Identities = 30/208 (14%), Positives = 55/208 (26%), Gaps = 23/208 (11%)
Query: 1698 PDFIVPLKDLVVPLGKLLTLQCEATG-TPVPKC--RWLRNGREISSGARYRVETAGGVFR 1754
+ P+GK LTL+C+ G P LR +E+ R
Sbjct: 87 ERVELAPLPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELK---REPAVGEPAEVT 143
Query: 1755 LHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGT---------PPRIDRMPNALYIPEG 1805
D +++C + P ++ + +
Sbjct: 144 TTVLVRRDHHGANFSCRTELDLRPQGLELFENTSAPYQLQTFVLPATPPQLVSPRVLEVD 203
Query: 1806 DNTKVKIFYAGDQP---MEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYT 1862
V G P +V L + + + D + + ED G
Sbjct: 204 TQGTVVCSLDGLFPVSEAQVHLALGDQRLNPTVTYGN---DSFSAKASVSVTAEDEGTQR 260
Query: 1863 V--NLSNSSGSVSGTFTINITGLPGPPI 1888
+ + + S T+ I P P +
Sbjct: 261 LTCAVILGNQSQETLQTVTIYSFPAPNV 288
Score = 51.0 bits (121), Expect = 2e-06
Identities = 29/222 (13%), Positives = 65/222 (29%), Gaps = 29/222 (13%)
Query: 98 KDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVD 157
+++P G + + C + E + + + V +
Sbjct: 7 SKVILPRGGSVLVTCSTSCDQPKLLGI-----ETPLPKKELLLPGNNRKVYELSNVQE-- 59
Query: 158 NGDYTCEAYNSVGFAHTSSRVKIGTPP-RIDRMPNALYIPEGDNTKVKIFYAGDQPME-- 214
+ C + G + + + + P R++ P + P G N ++ G P
Sbjct: 60 DSQPMCYSNCPDGQSTAKTFLTVYWTPERVELAPLPSWQPVGKNLTLRCQVEGGAPRANL 119
Query: 215 -VSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAG---------DYTVNLSNSSGS 264
V L + + ++ + + + +R++ G D +
Sbjct: 120 TVVLLRGEKELKREPAVG----EPAEVTTTVLVRRDHHGANFSCRTELDLRPQGLELFEN 175
Query: 265 VSGTFTINITGLPGPPIGP-----LDVSEITKHTCTLHWNPP 301
S + + LP P L+V C+L P
Sbjct: 176 TSAPYQLQTFVLPATPPQLVSPRVLEVDTQGTVVCSLDGLFP 217
Score = 51.0 bits (121), Expect = 2e-06
Identities = 29/222 (13%), Positives = 65/222 (29%), Gaps = 29/222 (13%)
Query: 1705 KDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVD 1764
+++P G + + C + E + + + V +
Sbjct: 7 SKVILPRGGSVLVTCSTSCDQPKLLGI-----ETPLPKKELLLPGNNRKVYELSNVQE-- 59
Query: 1765 NGDYTCEAYNSVGFAHTSSRVKIGTPP-RIDRMPNALYIPEGDNTKVKIFYAGDQPME-- 1821
+ C + G + + + + P R++ P + P G N ++ G P
Sbjct: 60 DSQPMCYSNCPDGQSTAKTFLTVYWTPERVELAPLPSWQPVGKNLTLRCQVEGGAPRANL 119
Query: 1822 -VSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAG---------DYTVNLSNSSGS 1871
V L + + ++ + + + +R++ G D +
Sbjct: 120 TVVLLRGEKELKREPAVG----EPAEVTTTVLVRRDHHGANFSCRTELDLRPQGLELFEN 175
Query: 1872 VSGTFTINITGLPGPPIGP-----LDVSEITKHTCTLHWNPP 1908
S + + LP P L+V C+L P
Sbjct: 176 TSAPYQLQTFVLPATPPQLVSPRVLEVDTQGTVVCSLDGLFP 217
Score = 47.9 bits (113), Expect = 2e-05
Identities = 27/178 (15%), Positives = 61/178 (34%), Gaps = 15/178 (8%)
Query: 482 EIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIIN 541
+ V + + C+ T C +P + ++ TP + + G+ +
Sbjct: 1 QTSVSPSKVILPRGGSVLVTCS-TSCDQPKLLGIE-----TPLPKKELLLPGNNRKVYEL 54
Query: 542 SVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFT 601
S + + +C + G + K L + P+ ++ G+N+ ++
Sbjct: 55 SNVQ-EDSQPMCYSNCPDGQSTAKTFLTVYWTPER--VELAPLPSWQPVGKNLTLRCQVE 111
Query: 602 G-YPKPKIT--WYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAPYRVVAENDLG 656
G P+ +T R + ++ E +E + +R A + E DL
Sbjct: 112 GGAPRANLTVVLLRGEKELKREP-AVGEPAEVTTTVLVRRDH--HGANFSCRTELDLR 166
Score = 46.4 bits (109), Expect = 7e-05
Identities = 22/204 (10%), Positives = 52/204 (25%), Gaps = 16/204 (7%)
Query: 481 PEIIVPLRNANAIQNHNAQFQCTITGC---PKPTISWLKGSREITPSARHHIFAEGDTYT 537
+ + + N +C + G T+ L+G +E+ R E T
Sbjct: 87 ERVELAPLPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELK---REPAVGEPAEVT 143
Query: 538 LIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNV------PPRFRDTAYFDKG 591
+ + CR + + + PP+ +
Sbjct: 144 TTVLVRRDHHGANFSCRTELDLRPQGLELFENTSAPYQLQTFVLPATPPQLVSPRVLEVD 203
Query: 592 ENVVVKIPFTGYPKP---KITWYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAPYR 648
V G ++ ++ + + ++ A +++ A + T
Sbjct: 204 TQGTVVCSLDGLFPVSEAQVHLALGDQRLNPTVTYGNDSFSAKASVSVT-AEDEGTQRLT 262
Query: 649 VVAENDLGMDSAIVKIQISDRPDP 672
+ + I P P
Sbjct: 263 CAVILGNQSQETLQTVTIYSFPAP 286
Score = 36.0 bits (82), Expect = 0.11
Identities = 12/101 (11%), Positives = 26/101 (25%), Gaps = 6/101 (5%)
Query: 2088 PEIIVPLRNANAIQNHNAQFQCTITGC---PKPTISWLKGSREITPSARHHIFAEGDTYT 2144
+ + + N +C + G T+ L+G +E+ R E T
Sbjct: 87 ERVELAPLPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELK---REPAVGEPAEVT 143
Query: 2145 LIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNV 2185
+ + CR + + +
Sbjct: 144 TTVLVRRDHHGANFSCRTELDLRPQGLELFENTSAPYQLQT 184
Score = 31.4 bits (70), Expect = 3.5
Identities = 16/110 (14%), Positives = 31/110 (28%), Gaps = 15/110 (13%)
Query: 1131 PPCAPKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPI---WTVNGDEVSPDGRIKFET 1187
P P++ S + + T+ G + + ++P T
Sbjct: 188 PATPPQLVSPRVLE-----VDTQGTVVCSLDGLFPVSEAQVHLALGDQRLNPTV-----T 237
Query: 1188 SENQTIYRNKSAK-RATDSGSYTIQLVNTVGSDSASCKVYV-VDKPSPPQ 1235
N + S A D G+ + +G+ S V + P
Sbjct: 238 YGNDSFSAKASVSVTAEDEGTQRLTCAVILGNQSQETLQTVTIYSFPAPN 287
>2dlh_A Receptor-type tyrosine-protein phosphatase delta; protein-tyrosine
phosphatase delta, R-PTP-delta, structural genomics,
NPPSFA; NMR {Homo sapiens}
Length = 121
Score = 49.7 bits (119), Expect = 5e-07
Identities = 23/115 (20%), Positives = 38/115 (33%), Gaps = 6/115 (5%)
Query: 656 GMDSAIVKIQIS-DRP-DPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIV---EKRE 710
S V Q S P P+ + ++ + W+ P G I Y V
Sbjct: 3 SGSSGPVLTQTSEQAPSSAPRDVQARMLSSTTILVQWKEPEEPNG-QIQGYRVYYTMDPT 61
Query: 711 HPMSSWIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKDT 765
+++W++ I L P Y +V A G S+ +IT +
Sbjct: 62 QHVNNWMKHNVADSQITTIGNLVPQKTYSVKVLAFTSIGDGPLSSDIQVITQTGS 116
Score = 48.9 bits (117), Expect = 7e-07
Identities = 25/113 (22%), Positives = 40/113 (35%), Gaps = 10/113 (8%)
Query: 358 GMGPPLEGINPIKAKSPYDKPS-PPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWI-- 414
G P+ ++ PS P + + + W +P + G +IQGY +
Sbjct: 1 GSSGSSG---PVLTQTSEQAPSSAPRDVQARMLSSTTILVQWKEPEEPNG-QIQGYRVYY 56
Query: 415 -DKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSA 466
+ W + NVA I NL+ + Y +V A G SS
Sbjct: 57 TMDPTQHVNNWMKHNVA--DSQITTIGNLVPQKTYSVKVLAFTSIGDGPLSSD 107
Score = 48.9 bits (117), Expect = 7e-07
Identities = 25/113 (22%), Positives = 40/113 (35%), Gaps = 10/113 (8%)
Query: 1965 GMGPPLEGINPIKAKSPYDKPS-PPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWI-- 2021
G P+ ++ PS P + + + W +P + G +IQGY +
Sbjct: 1 GSSGSSG---PVLTQTSEQAPSSAPRDVQARMLSSTTILVQWKEPEEPNG-QIQGYRVYY 56
Query: 2022 -DKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSA 2073
+ W + NVA I NL+ + Y +V A G SS
Sbjct: 57 TMDPTQHVNNWMKHNVA--DSQITTIGNLVPQKTYSVKVLAFTSIGDGPLSSD 107
Score = 47.4 bits (113), Expect = 3e-06
Identities = 15/99 (15%), Positives = 30/99 (30%), Gaps = 8/99 (8%)
Query: 270 TINITGLPGPPIGP---LDVSEITKHTCTLHWNPPKYDGGLKVTHYVV---ERRDISMPH 323
+ P + ++ T + W P+ G ++ Y V + +
Sbjct: 8 PVLTQTSEQAPSSAPRDVQARMLSSTTILVQWKEPEEPNG-QIQGYRVYYTMDPTQHVNN 66
Query: 324 WICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPP 362
W+ + + L + Y V+A G GP
Sbjct: 67 WMKHNVA-DSQITTIGNLVPQKTYSVKVLAFTSIGDGPL 104
Score = 47.4 bits (113), Expect = 3e-06
Identities = 15/99 (15%), Positives = 30/99 (30%), Gaps = 8/99 (8%)
Query: 1877 TINITGLPGPPIGP---LDVSEITKHTCTLHWNPPKYDGGLKVTHYVV---ERRDISMPH 1930
+ P + ++ T + W P+ G ++ Y V + +
Sbjct: 8 PVLTQTSEQAPSSAPRDVQARMLSSTTILVQWKEPEEPNG-QIQGYRVYYTMDPTQHVNN 66
Query: 1931 WICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPP 1969
W+ + + L + Y V+A G GP
Sbjct: 67 WMKHNVA-DSQITTIGNLVPQKTYSVKVLAFTSIGDGPL 104
Score = 47.4 bits (113), Expect = 3e-06
Identities = 17/82 (20%), Positives = 31/82 (37%), Gaps = 5/82 (6%)
Query: 904 PPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVV---EKKDYNSTVWTKVSSYVTTPFV 960
P ++ A + ++ + W P + G +I Y V + W K + +
Sbjct: 21 APRDVQARMLSSTTILVQWKEPEEPNG-QIQGYRVYYTMDPTQHVNNWMKHNV-ADSQIT 78
Query: 961 RVRNLAIGSTYEFRVMAENQYG 982
+ NL TY +V+A G
Sbjct: 79 TIGNLVPQKTYSVKVLAFTSIG 100
Score = 46.2 bits (110), Expect = 7e-06
Identities = 18/109 (16%), Positives = 33/109 (30%), Gaps = 9/109 (8%)
Query: 1217 GSDSASCKVYVV-DKPS-PPQGPLDVSDITPESCSLSWKPPLDDGGSPITNYVVEKYESA 1274
S PS P+ + ++ + + WK P + G I Y V
Sbjct: 3 SGSSGPVLTQTSEQAPSSAPRD-VQARMLSSTTILVQWKEPEEPNG-QIQGYRVYYTMDP 60
Query: 1275 TGFWSKLSSFVRSPA--YDVFGLETNRQYRFRVRAENQYGV---SEPLE 1318
T + + + + L + Y +V A G S ++
Sbjct: 61 TQHVNNWMKHNVADSQITTIGNLVPQKTYSVKVLAFTSIGDGPLSSDIQ 109
Score = 41.2 bits (97), Expect = 4e-04
Identities = 23/125 (18%), Positives = 37/125 (29%), Gaps = 37/125 (29%)
Query: 1000 DVPGAPGAPKGV---DSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHI 1056
P + P+ V + +I + W +P G IQ Y V + + + M H
Sbjct: 16 QAPSSA--PRDVQARMLSSTTILVQWKEPEEPNG-QIQGYRVYYTM-DPTQHVNNWMKHN 71
Query: 1057 PDTSLKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQ 1116
S + +L+ Y +V A + G
Sbjct: 72 VADSQITTI------------------------------GNLVPQKTYSVKVLAFTSIGD 101
Query: 1117 GPWSS 1121
GP SS
Sbjct: 102 GPLSS 106
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP;
2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Length = 576
Score = 53.6 bits (129), Expect = 6e-07
Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 15/87 (17%)
Query: 820 DHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRK---------EIDI 870
+ + +G G FG V C+ R TG ++A K LEK+ I+K E I
Sbjct: 184 NTFRQYRVLGKGGFGEVCACQVRATGKMYACKK------LEKKRIKKRKGEAMALNEKQI 237
Query: 871 MNQLHHPKLINLHDAFEDDDEMVLIFE 897
+ +++ +++L A+E D + L+
Sbjct: 238 LEKVNSRFVVSLAYAYETKDALCLVLT 264
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural
cytotoxicity receptor, NK cell receptor, immunoglobulin
fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4
b.1.1.4
Length = 242
Score = 51.8 bits (124), Expect = 7e-07
Identities = 29/230 (12%), Positives = 64/230 (27%), Gaps = 28/230 (12%)
Query: 101 VVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGD 160
+VP K +T+ C+ + + G + R + + + ++ G
Sbjct: 17 MVPKEKQVTICCQGN-YGAVEYQLHFEGSLFAVD-RPKPPERINKVKFYIPDMNSRMAGQ 74
Query: 161 YTCEAYNSVGFAHTSSRVKIGTPPRIDR----MPNALYIPEGDNTKVKIFYAGDQPME-V 215
Y+C ++ S+ + + D + + G+ V + D
Sbjct: 75 YSCIYRVGELWSEPSNLLDLVVTEMYDTPTLSVHPGPEVISGEK--VTFYCRLDTATSMF 132
Query: 216 SLTKNGRVVQ-----SDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSG---SVSG 267
L K GR + +F + + G Y S ++ S
Sbjct: 133 LLLKEGRSSHVQRGYGKVQAEFP---------LGPVTTAHRGTYRCFGSYNNHAWSFPSE 183
Query: 268 TFTINITGLPGPP-IGPLDVSEITKHTCTLHW-NPPKYDGGLKVTHYVVE 315
+ +TG + P D + T + + +
Sbjct: 184 PVKLLVTGDIENTSLAPEDPTFPADTWGTYLLTTETGLQKDHALWDHTAQ 233
Score = 51.8 bits (124), Expect = 7e-07
Identities = 29/230 (12%), Positives = 64/230 (27%), Gaps = 28/230 (12%)
Query: 1708 VVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGD 1767
+VP K +T+ C+ + + G + R + + + ++ G
Sbjct: 17 MVPKEKQVTICCQGN-YGAVEYQLHFEGSLFAVD-RPKPPERINKVKFYIPDMNSRMAGQ 74
Query: 1768 YTCEAYNSVGFAHTSSRVKIGTPPRIDR----MPNALYIPEGDNTKVKIFYAGDQPME-V 1822
Y+C ++ S+ + + D + + G+ V + D
Sbjct: 75 YSCIYRVGELWSEPSNLLDLVVTEMYDTPTLSVHPGPEVISGEK--VTFYCRLDTATSMF 132
Query: 1823 SLTKNGRVVQ-----SDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSG---SVSG 1874
L K GR + +F + + G Y S ++ S
Sbjct: 133 LLLKEGRSSHVQRGYGKVQAEFP---------LGPVTTAHRGTYRCFGSYNNHAWSFPSE 183
Query: 1875 TFTINITGLPGPP-IGPLDVSEITKHTCTLHW-NPPKYDGGLKVTHYVVE 1922
+ +TG + P D + T + + +
Sbjct: 184 PVKLLVTGDIENTSLAPEDPTFPADTWGTYLLTTETGLQKDHALWDHTAQ 233
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 53.9 bits (129), Expect = 8e-07
Identities = 101/647 (15%), Positives = 172/647 (26%), Gaps = 266/647 (41%)
Query: 1235 QGPLDVSDITPES----CSLSWKPPLDDGGSPITNYVV-EKYESATGFWSKLSSFVRSPA 1289
G L+ + P + S + P + ++ + K +V S
Sbjct: 13 HGSLEHVLLVPTASFFIASQLQEQFNKILPEPTEGFAADDEPTTPAELVGKFLGYVSSL- 71
Query: 1290 YDVFGLETNRQYRFR-------VRAENQYGVSEPLELDN--SITAKFPFTVPDPPGQPQI 1340
+E ++ +F EN Y LE ++ ++ AK + +
Sbjct: 72 -----VEPSKVGQFDQVLNLCLTEFENCY-----LEGNDIHALAAKLL--QENDTTLVKT 119
Query: 1341 VDWDTN--NATLMWDRPRT------------DGGSKI------QG--------------- 1365
+ N A +M RP +G +++ QG
Sbjct: 120 KELIKNYITARIMAKRPFDKKSNSALFRAVGEGNAQLVAIFGGQGNTDDYFEELRDLYQT 179
Query: 1366 YKMLLKTPTGELPTTIWSKIRPTSST--VYCK--DTT--MNSSNSEPGKQ-------SGP 1412
Y +L+ T+ IR T V+ + + + + ++ P K S P
Sbjct: 180 YHVLVGDLIKFSAETLSELIRTTLDAEKVFTQGLNILEWLENPSNTPDKDYLLSIPISCP 239
Query: 1413 VIVEEQ--------------PNKPVMDLSGV----RDI-------TVKAGEDF------S 1441
+I Q P + L G + + + E F +
Sbjct: 240 LIGVIQLAHYVVTAKLLGFTPGELRSYLKGATGHSQGLVTAVAIAETDSWESFFVSVRKA 299
Query: 1442 IHVPF-------MAFPQPAAFWFANDSIIDDSDTRVHKQLT-MNSASLVVK--------- 1484
I V F A+P + SI++DS + M L +
Sbjct: 300 ITVLFFIGVRCYEAYPNTSL----PPSILEDSLENNEGVPSPM----LSISNLTQEQVQD 351
Query: 1485 -----NSQRSDGGQYRLQLKN-P-----AGF--DTATLHSRLRTL--PDSVNPRCHLPSS 1529
NS G Q + L N +G L+ LR P ++ + +P S
Sbjct: 352 YVNKTNSHLPAGKQVEISLVNGAKNLVVSGPPQSLYGLNLTLRKAKAPSGLD-QSRIPFS 410
Query: 1530 TSKERPKF-----P-THPNHQPWLKWARASLTSKGVDSTEDSISLVWSKPRHDGGSPIQR 1583
+ + KF P P H L A
Sbjct: 411 --ERKLKFSNRFLPVASPFHSHLLVPASD------------------------------- 437
Query: 1584 YIVEKRLISDDKWIKASMAHIP--DTSLKYVLWVSEGKSIGSERGSTAQFLEREVGGAIW 1641
++ K L+ ++ A IP DT +G + R + G+I
Sbjct: 438 -LINKDLVKNNVSFNAKDIQIPVYDTF--------DGSDL------------RVLSGSI- 475
Query: 1642 LKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPSICTTPV---KICEFVGGEKP 1698
+V+ I PV +F K
Sbjct: 476 --------------SERIVD-------------------CIIRLPVKWETTTQF----KA 498
Query: 1699 DFIV---PLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGA 1742
I+ P LG L + TG R I +G
Sbjct: 499 THILDFGPGG--ASGLGVLTHRNKDGTGV-----------RVIVAGT 532
Score = 46.6 bits (110), Expect = 1e-04
Identities = 110/649 (16%), Positives = 186/649 (28%), Gaps = 234/649 (36%)
Query: 1647 YNVLECSFSVLNLVEGNDY--------EFRIIAVNA----IGKSEPSICTTPVKIC-EFV 1693
+ LE LV + +F I EP+ TP ++ +F+
Sbjct: 13 HGSLEHVL----LVPTASFFIASQLQEQFNKILPEPTEGFAADDEPT---TPAELVGKFL 65
Query: 1694 GGEKPDFIVPLKD-----LVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVET 1748
G ++ L + + L + E +L G +I + A
Sbjct: 66 G-----YVSSLVEPSKVGQFDQVLNLCLTEFENC--------YLE-GNDIHALAA----- 106
Query: 1749 AGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMPNALY--IPEGD 1806
+L T + + Y ++R+ P + +AL+ + EG+
Sbjct: 107 -----KLLQENDTTLVKTKELIKNY-------ITARIMAKRPFD-KKSNSALFRAVGEGN 153
Query: 1807 NTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLS 1866
V IF G Q G DDY F +E+R L
Sbjct: 154 AQLVAIF--GGQ---------GNT------------DDY---F-EELRD---------LY 177
Query: 1867 NSSGSVSGTFTINITG-LPGPPIGPLDVSEITKHTCTLH-W--NP---PKYDGGLKVTHY 1919
+ + G L LD ++ + W NP P D Y
Sbjct: 178 QTYHVLVGDLIKFSAETLSELIRTTLDAEKVFTQGLNILEWLENPSNTPDKD-------Y 230
Query: 1920 VVERRDISMPHWICISTTCH-DTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKA 1978
++ IS P I + H T + G T G+ L + G +G+ + A
Sbjct: 231 LLSIP-ISCP-LIGVIQLAHYVVTAKLLGFTPGE--LRSYLK----GATGHSQGL--VTA 280
Query: 1979 KSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQG-YWIDKHEVGSDAWQRVNVA 2037
V SW+ I ++I G ++
Sbjct: 281 -------------VAIAETD-----SWESFFVSVRKAITVLFFI-----GVRCYE----- 312
Query: 2038 ICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAA----KAPEIIVP 2093
P+ P+++E +N G+ PS PM + ++
Sbjct: 313 -AYPNTSLPPSILED-------SLENNEGV--PS----------PMLSISNLTQEQVQDY 352
Query: 2094 LRNANA---------IQNHNAQFQCTITGCPKPTISWLKG----------------SREI 2128
+ N+ I N ++G P S L G SR
Sbjct: 353 VNKTNSHLPAGKQVEISLVNGAKNLVVSG---PPQS-LYGLNLTLRKAKAPSGLDQSR-- 406
Query: 2129 TP-SAR----HHIFAEGDTYTLII----NSVYGVDADEYVCRAVNKGGVKSTKAELIIMT 2179
P S R + F L + +S V A + + + + K V ++ I
Sbjct: 407 IPFSERKLKFSNRF-------LPVASPFHSHLLVPASDLINKDLVKNNVSFNAKDIQI-- 457
Query: 2180 APKFNVPPRF--RDTAYFESDVVVVVCVCFFLMIRRP---PRSTLFPYT 2223
P ++ F D + + C +IR P +T F T
Sbjct: 458 -PVYDT---FDGSDLRVLSGSISERIVDC---IIRLPVKWETTTQFKAT 499
Score = 43.9 bits (103), Expect = 7e-04
Identities = 120/710 (16%), Positives = 200/710 (28%), Gaps = 273/710 (38%)
Query: 40 YNVLECSFSVLNLVEGNDY--------EFRIIAVNA----IGKSEPSICTTPVKIC-EFV 86
+ LE LV + +F I EP+ TP ++ +F+
Sbjct: 13 HGSLEHVL----LVPTASFFIASQLQEQFNKILPEPTEGFAADDEPT---TPAELVGKFL 65
Query: 87 GGEKPDFIVPLKD-----LVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVET 141
G ++ L + + L + E +L G +I + A
Sbjct: 66 G-----YVSSLVEPSKVGQFDQVLNLCLTEFENC--------YLE-GNDIHALAA----- 106
Query: 142 AGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMPNALY--IPEGD 199
+L T + + Y ++R+ P + +AL+ + EG+
Sbjct: 107 -----KLLQENDTTLVKTKELIKNY-------ITARIMAKRPFD-KKSNSALFRAVGEGN 153
Query: 200 NTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLS 259
V IF G Q G DDY F +E+R L
Sbjct: 154 AQLVAIF--GGQ---------GNT------------DDY---F-EELRD---------LY 177
Query: 260 NSSGSVSGTFTINITG-LPGPPIGPLDVSEITKHTCTLH-W--NP---PKYDGGLKVTHY 312
+ + G L LD ++ + W NP P D Y
Sbjct: 178 QTYHVLVGDLIKFSAETLSELIRTTLDAEKVFTQGLNILEWLENPSNTPDKD-------Y 230
Query: 313 VVERRDISMPHWICISTTCH-DTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKA 371
++ IS P I + H T + G T G+ L + G +G+ + A
Sbjct: 231 LLSIP-ISCP-LIGVIQLAHYVVTAKLLGFTPGE--LRSYLK----GATGHSQGL--VTA 280
Query: 372 KSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQG-YWIDKHEVGSDAWQRVNVA 430
V SW+ I ++I G ++
Sbjct: 281 -------------VAIAETD-----SWESFFVSVRKAITVLFFI-----GVRCYE----- 312
Query: 431 ICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAA----KAPEIIVP 486
P+ P+++E +N G+ PS PM + ++
Sbjct: 313 -AYPNTSLPPSILED-------SLENNEGV--PS----------PMLSISNLTQEQVQDY 352
Query: 487 LRNANA---------IQNHNAQFQCTITGCPKPTISWLKG----------------SREI 521
+ N+ I N ++G P S L G SR
Sbjct: 353 VNKTNSHLPAGKQVEISLVNGAKNLVVSG---PPQS-LYGLNLTLRKAKAPSGLDQSR-- 406
Query: 522 TP-SAR----HHIFAEGDTYTLII----NSVYGVDADEYVCRAVNKGGVKSTKAELIIMT 572
P S R + F L + +S V A + + + + K V ++ I
Sbjct: 407 IPFSERKLKFSNRF-------LPVASPFHSHLLVPASDLINKDLVKNNVSFNAKDIQI-- 457
Query: 573 APKFNVPPRFRDTAYFDKGENV----------VVKIPFTGYPKPKITWYRDNEVIESGGH 622
P + DT FD G ++ +V P + W E
Sbjct: 458 -PVY-------DT--FD-GSDLRVLSGSISERIVDCIIR---LP-VKW----ETTTQFKA 498
Query: 623 FHV------ETSERHAILTIR----------DASNVDTAPYRVVAENDLG 656
H+ S +LT R A +D P ++D G
Sbjct: 499 THILDFGPGGAS-GLGVLTHRNKDGTGVRVIVAGTLDINP-----DDDYG 542
Score = 42.3 bits (99), Expect = 0.002
Identities = 78/528 (14%), Positives = 149/528 (28%), Gaps = 236/528 (44%)
Query: 576 FNVPP-------RFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNE---VIESGGHF-- 623
VP + ++ F+K P+P + D+E E G F
Sbjct: 20 LLVPTASFFIASQLQEQ--FNKI-----------LPEPTEGFAADDEPTTPAELVGKFLG 66
Query: 624 HV-------ETSERHAIL---------TIRDASNVDTAPYRVVAENDLGMDSAIVKIQ-- 665
+V + + +L + +++ + A+ D+ +VK +
Sbjct: 67 YVSSLVEPSKVGQFDQVLNLCLTEFENCYLEGNDIHA----LAAKLLQENDTTLVKTKEL 122
Query: 666 ---------ISDRPDPPQ-----FPTVEDIGHDSLALVWRAPIWDGG-SNITNYIVEKRE 710
++ RP + F V + G+ L ++ GG N +Y E R+
Sbjct: 123 IKNYITARIMAKRPFDKKSNSALFRAVGE-GNAQLVAIF------GGQGNTDDYFEELRD 175
Query: 711 -------------------------HPMS------------SWIR--------------- 718
+ W+
Sbjct: 176 LYQTYHVLVGDLIKFSAETLSELIRTTLDAEKVFTQGLNILEWLENPSNTPDKDYLLSIP 235
Query: 719 -----VGNTRFTTMAIT----GLSPGHQYEFRVYAENVYGRSDPSTTSDLIT-------- 761
+G + +T G +PG E R Y + G S L+T
Sbjct: 236 ISCPLIGVIQLAHYVVTAKLLGFTPG---ELRSYLKGATGHS-----QGLVTAVAIAETD 287
Query: 762 TKDTFKKQIKK-------------RQY-----------DFDETGKK-------IRGKADE 790
+ ++F ++K Y D E + I E
Sbjct: 288 SWESFFVSVRKAITVLFFIGVRCYEAYPNTSLPPSILEDSLENNEGVPSPMLSISNLTQE 347
Query: 791 KVSDYDQYVFDIYSKYVPQPVDIKTSSV--YDHYDILEEIGTGA----FGVVHRCR---- 840
+V DY + ++P ++ S V + ++ +G +G+ R
Sbjct: 348 QVQDYVNKT----NSHLPAGKQVEISLVNGAKNL-VV----SGPPQSLYGLNLTLRKAKA 398
Query: 841 ------------ERKTGNIFAAKFIPVS---H---------NLEKELIRKEIDIM-NQLH 875
ERK F+ +F+PV+ H + K+L++ + +
Sbjct: 399 PSGLDQSRIPFSERKL--KFSNRFLPVASPFHSHLLVPASDLINKDLVKNNVSFNAKDIQ 456
Query: 876 HPKLINLHDAFEDDDEMVLIFEVLDRPHPPENLHADEFAGDSLTLYWT 923
P ++D F+ D VL + +R D L + W
Sbjct: 457 IP----VYDTFDGSDLRVLSGSISER-------IVDCII--RLPVKWE 491
Score = 42.0 bits (98), Expect = 0.003
Identities = 77/514 (14%), Positives = 144/514 (28%), Gaps = 177/514 (34%)
Query: 849 AAKFIP-VSHNLEKELIRKEIDIMNQLHHPKLINLHDAFEDDDEMVLIFEVLDRPHPPEN 907
KF+ VS +E + + + L FE+ L+ +
Sbjct: 61 VGKFLGYVSSLVEPSKVGQFDQV--------LNLCLTEFENC--------YLEG----ND 100
Query: 908 LHADEFAGDSLTLYWTPPRDNGGSEITNYV--------VEKKDYNSTVWTKVSS-----Y 954
+HA A L I NY+ K NS ++ V
Sbjct: 101 IHA--LAA-KLLQENDTTLVKTKELIKNYITARIMAKRPFDKKSNSALFRAVGEGNAQLV 157
Query: 955 V--------TTPFVRVRNLAIGSTYE------FRVMAENQYGLSKPALTIDPIKAKHPFD 1000
F +R+L TY + AE L + L + + +
Sbjct: 158 AIFGGQGNTDDYFEELRDL--YQTYHVLVGDLIKFSAETLSELIRTTLDAEKV-FTQGLN 214
Query: 1001 V------PG-APGAPKGVDSTEDS---ISLV-------------WS----KPRHDGGSPI 1033
+ P P + S S I ++ ++ + G +
Sbjct: 215 ILEWLENPSNTPDKDY-LLSIPISCPLIGVIQLAHYVVTAKLLGFTPGELRSYLKGATGH 273
Query: 1034 QRYIVEKRLISD-DKWIKASMAHIPDTSLKYVLWVSEGKSIGSERGSTAQFLELLLMFIP 1092
+ +V I++ D W S ++ + + IG L P
Sbjct: 274 SQGLVTAVAIAETDSW--ESFFVSVRKAITVLFF------IGVRCYEAYPNTSL----PP 321
Query: 1093 NRVTSLIENHE----------------YEFRVCAVNAAGQGPWSS--------SSDIIMC 1128
+ + +EN+E + V N+ P + ++
Sbjct: 322 SILEDSLENNEGVPSPMLSISNLTQEQVQDYVNKTNS--HLPAGKQVEISLVNGAKNLVV 379
Query: 1129 CAPPCAPKITSDL-----SIRDMTVLAGEEFTITVPFSGRPKPT------PIWT------ 1171
PP L ++R +G + + +PFS R K P+ +
Sbjct: 380 SGPP------QSLYGLNLTLRKAKAPSGLDQS-RIPFSER-KLKFSNRFLPVASPFHSHL 431
Query: 1172 -------VNGDEVSPDGRIKFETSENQ-TIYRNKSAK--RATDSGSYTIQLVNTVGSD-- 1219
+N D V + + F + Q +Y R SGS + ++V+ +
Sbjct: 432 LVPASDLINKDLVKNN--VSFNAKDIQIPVYDTFDGSDLRVL-SGSISERIVDCIIRLPV 488
Query: 1220 --------SASCKVYVVDKPSPPQGPLDVSDITP 1245
A+ +++D GP S +
Sbjct: 489 KWETTTQFKAT---HILD-----FGPGGASGLGV 514
Score = 37.0 bits (85), Expect = 0.095
Identities = 43/264 (16%), Positives = 83/264 (31%), Gaps = 89/264 (33%)
Query: 868 IDIMNQLHHPKLINLHDAFED-----DDEMVLIFE-VLDRPHPPENLHADEFAGDSLTLY 921
+DI+ +++P + +H E ++ +IFE ++D E + + + T Y
Sbjct: 1662 LDIV--INNPVNLTIHFGGEKGKRIRENYSAMIFETIVDGKLKTEKIFKE--INEHSTSY 1717
Query: 922 -WTPPRDNGGSEITNYVVEKKDYNSTVWTKVSSYVTTPFVRVRNLAIGSTYEFRVMAENQ 980
+ + + ++T +T+ + + A F +
Sbjct: 1718 TFRSEKG----LL----------SATQFTQPALTLM-------EKAA-----FEDLKSK- 1750
Query: 981 YGLSKPALTIDPIKAKHPFDVPG---APGAPKGVDSTEDSISLVWSKPRHDGGSPIQRYI 1037
GL D A H G A + V S E + +V R G +Q +
Sbjct: 1751 -GLIPA----DATFAGHSL---GEYAALASLADVMSIESLVEVV--FYR---GMTMQVAV 1797
Query: 1038 VEKRLISDDKWIKA----SM-AHIPDTSLKYVLWVSEGKSIGSERGSTAQFLELLLMFIP 1092
L + + A + A +L+YV+ + +G G +E
Sbjct: 1798 PRDELGRSNYGMIAINPGRVAASFSQEALQYVV-----ERVGKRTG---WLVE------- 1842
Query: 1093 NRVTSLIENHEYEFRVCAVNAAGQ 1116
I N+ N Q
Sbjct: 1843 ------IVNY---------NVENQ 1851
Score = 32.3 bits (73), Expect = 2.5
Identities = 23/127 (18%), Positives = 41/127 (32%), Gaps = 37/127 (29%)
Query: 15 EIIVDDCYIIERREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPS 74
++I D + + V +N + V + +G+D R+++ + +
Sbjct: 437 DLINKD---LVKNNV---------SFNAKDIQIPVYDTFDGSD--LRVLSGSISERIVDC 482
Query: 75 ICTTPV---KICEFVGGEKPDFIV---PLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNG 128
I PV +F K I+ P LG L + TG
Sbjct: 483 IIRLPVKWETTTQF----KATHILDFGPGG--ASGLGVLTHRNKDGTGV----------- 525
Query: 129 REISSGA 135
R I +G
Sbjct: 526 RVIVAGT 532
Score = 31.9 bits (72), Expect = 2.9
Identities = 55/328 (16%), Positives = 92/328 (28%), Gaps = 123/328 (37%)
Query: 1424 MDL----SGVRDITVKAGE------DFSIHVPFMAFPQPAAFWFANDSIIDDSDTRVHKQ 1473
MDL +D+ +A FSI + P F K+
Sbjct: 1633 MDLYKTSKAAQDVWNRADNHFKDTYGFSILDIVINNPVNLTIHF---------GGEKGKR 1683
Query: 1474 LTMNSASLVVKNSQRSDGGQYRLQLKNPAGFDTATLHSRLRTL--PDSVNPRCHLPSSTS 1531
+ N ++++ + DG ++ F HS T + T
Sbjct: 1684 IRENYSAMIFETI--VDGKLKTEKI-----FKEINEHSTSYTFRSEKGL---LSATQFTQ 1733
Query: 1532 --------------KERPKFPT------HPNHQPWLKWARASL-------TSKGVDSTED 1564
K + P H SL + V S E
Sbjct: 1734 PALTLMEKAAFEDLKSKGLIPADATFAGH------------SLGEYAALASLADVMSIES 1781
Query: 1565 SISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKA----SM-AHIPDTSLKYVLWVSEGK 1619
+ +V R G +Q + L + + A + A +L+YV+ +
Sbjct: 1782 LVEVV--FYR---GMTMQVAVPRDELGRSNYGMIAINPGRVAASFSQEALQYVV-----E 1831
Query: 1620 SIGSERGSTAQFLEREVGGAIWLKCNDYNVLECSFSVLNLVEGNDYEFRIIA--VNAIGK 1677
+G G +E I N YN VE Y + A + A+
Sbjct: 1832 RVGKRTG---WLVE------I---VN-YN-----------VENQQY---VAAGDLRAL-- 1862
Query: 1678 SEPSICTTPVKICEFVGGEKPDFIVPLK 1705
T + F+ +K D I+ L+
Sbjct: 1863 ------DTVTNVLNFIKLQKID-IIELQ 1883
>1va9_A DOWN syndrome cell adhesion molecule like- protein 1B; FNIII
domain, dscaml1 protein, structural genomics; NMR {Homo
sapiens} SCOP: b.1.2.1
Length = 122
Score = 48.9 bits (117), Expect = 9e-07
Identities = 22/119 (18%), Positives = 40/119 (33%), Gaps = 12/119 (10%)
Query: 270 TINITGLPGPPIGP---LDVSEITKHTCTLHWNPPKYDG------GLKVTHYVVERRDIS 320
+ I+ P GP + + +T + + W PK + G ++ +
Sbjct: 5 SSGISTEEAAPDGPPMDVTLQPVTSQSIQVTWKAPKKELQNGVIRGYQIGYRENSPGSNG 64
Query: 321 MPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPS 379
+ + T + + L + +Y V A N G GP I A + PS
Sbjct: 65 QYSIVEMKATGDSEVYTLDNLKKFAQYGVVVQAFNRAGTGPSSS---EINATTLESGPS 120
Score = 48.9 bits (117), Expect = 9e-07
Identities = 22/119 (18%), Positives = 40/119 (33%), Gaps = 12/119 (10%)
Query: 1877 TINITGLPGPPIGP---LDVSEITKHTCTLHWNPPKYDG------GLKVTHYVVERRDIS 1927
+ I+ P GP + + +T + + W PK + G ++ +
Sbjct: 5 SSGISTEEAAPDGPPMDVTLQPVTSQSIQVTWKAPKKELQNGVIRGYQIGYRENSPGSNG 64
Query: 1928 MPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPS 1986
+ + T + + L + +Y V A N G GP I A + PS
Sbjct: 65 QYSIVEMKATGDSEVYTLDNLKKFAQYGVVVQAFNRAGTGPSSS---EINATTLESGPS 120
Score = 44.7 bits (106), Expect = 3e-05
Identities = 19/109 (17%), Positives = 33/109 (30%), Gaps = 13/109 (11%)
Query: 904 PPENLHADEFAGDSLTLYWTPP---RDNGGSEITNYVV-----EKKDYNSTVWTKVSSYV 955
PP ++ S+ + W P NG I Y + ++ +
Sbjct: 18 PPMDVTLQPVTSQSIQVTWKAPKKELQNG--VIRGYQIGYRENSPGSNGQYSIVEMKATG 75
Query: 956 TTPFVRVRNLAIGSTYEFRVMAENQYGLSKPALTIDPIKAKHPFDVPGA 1004
+ + NL + Y V A N+ G + I A P +
Sbjct: 76 DSEVYTLDNLKKFAQYGVVVQAFNRAGTGPSS---SEINATTLESGPSS 121
Score = 43.5 bits (103), Expect = 7e-05
Identities = 22/105 (20%), Positives = 36/105 (34%), Gaps = 6/105 (5%)
Query: 367 NPIKAKSPYDKPS-PPGIPVVTQVGGDFVNLSWDKPL-DDGGSRIQGY---WIDKHEVGS 421
+ P PP + V + ++W P + I+GY + + +
Sbjct: 4 GSSGISTEEAAPDGPPMDVTLQPVTSQSIQVTWKAPKKELQNGVIRGYQIGYRENSPGSN 63
Query: 422 DAWQRVNVAICAPS-QINIPNLIEGRQYEFRVYAQNEAGLSLPSS 465
+ V + S + NL + QY V A N AG SS
Sbjct: 64 GQYSIVEMKATGDSEVYTLDNLKKFAQYGVVVQAFNRAGTGPSSS 108
Score = 43.5 bits (103), Expect = 7e-05
Identities = 22/105 (20%), Positives = 36/105 (34%), Gaps = 6/105 (5%)
Query: 1974 NPIKAKSPYDKPS-PPGIPVVTQVGGDFVNLSWDKPL-DDGGSRIQGY---WIDKHEVGS 2028
+ P PP + V + ++W P + I+GY + + +
Sbjct: 4 GSSGISTEEAAPDGPPMDVTLQPVTSQSIQVTWKAPKKELQNGVIRGYQIGYRENSPGSN 63
Query: 2029 DAWQRVNVAICAPS-QINIPNLIEGRQYEFRVYAQNEAGLSLPSS 2072
+ V + S + NL + QY V A N AG SS
Sbjct: 64 GQYSIVEMKATGDSEVYTLDNLKKFAQYGVVVQAFNRAGTGPSSS 108
Score = 42.0 bits (99), Expect = 2e-04
Identities = 22/107 (20%), Positives = 40/107 (37%), Gaps = 12/107 (11%)
Query: 668 DRPD-PPQFPTVEDIGHDSLALVWRAPIWDGGS-NITNYIV--------EKREHPMSSWI 717
PD PP T++ + S+ + W+AP + + I Y + ++ +
Sbjct: 13 AAPDGPPMDVTLQPVTSQSIQVTWKAPKKELQNGVIRGYQIGYRENSPGSNGQYSIVEMK 72
Query: 718 RVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKD 764
G++ T + L QY V A N G S+ + T +
Sbjct: 73 ATGDSEVYT--LDNLKKFAQYGVVVQAFNRAGTGPSSSEINATTLES 117
Score = 41.6 bits (98), Expect = 3e-04
Identities = 21/95 (22%), Positives = 37/95 (38%), Gaps = 8/95 (8%)
Query: 1229 DKPS-PPQGPLDVSDITPESCSLSWKPPL-DDGGSPITNYVV---EKYESATGFWSKLSS 1283
P PP + + +T +S ++WK P + I Y + E + G +S +
Sbjct: 13 AAPDGPPMD-VTLQPVTSQSIQVTWKAPKKELQNGVIRGYQIGYRENSPGSNGQYSIVEM 71
Query: 1284 FVRSPA--YDVFGLETNRQYRFRVRAENQYGVSEP 1316
+ Y + L+ QY V+A N+ G
Sbjct: 72 KATGDSEVYTLDNLKKFAQYGVVVQAFNRAGTGPS 106
Score = 36.2 bits (84), Expect = 0.021
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 1094 RVTSLIENHEYEFRVCAVNAAGQGPWSS 1121
+ +L + +Y V A N AG GP SS
Sbjct: 81 TLDNLKKFAQYGVVVQAFNRAGTGPSSS 108
>1z9m_A GAPA225; nectin-like, IG-like domain, V domain, cell adhesion;
2.40A {Homo sapiens}
Length = 145
Score = 49.8 bits (118), Expect = 9e-07
Identities = 13/131 (9%), Positives = 41/131 (31%), Gaps = 10/131 (7%)
Query: 454 AQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTIS 513
+ + S + + + + + + +C + ++
Sbjct: 12 FERQHMDSPDLGTDDDDKAMADINLSQDDSQPWTSDETVVAGGTVVLKCQVKDHEDSSLQ 71
Query: 514 WLKGSREI--------TPSARHHIFAEG-DTYTLIINSVYGVDADEYVCRAVNKGGVKST 564
W +++ R + ++ I++V D EY C + V++
Sbjct: 72 WSNPAQQTLYFGEKRALRDNRIQLVTSTPHELSISISNVALADEGEYTCS-IFTMPVRTA 130
Query: 565 KAELIIMTAPK 575
K+ + ++ P+
Sbjct: 131 KSLVTVLGIPQ 141
Score = 49.8 bits (118), Expect = 9e-07
Identities = 13/131 (9%), Positives = 41/131 (31%), Gaps = 10/131 (7%)
Query: 2061 AQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTIS 2120
+ + S + + + + + + +C + ++
Sbjct: 12 FERQHMDSPDLGTDDDDKAMADINLSQDDSQPWTSDETVVAGGTVVLKCQVKDHEDSSLQ 71
Query: 2121 WLKGSREI--------TPSARHHIFAEG-DTYTLIINSVYGVDADEYVCRAVNKGGVKST 2171
W +++ R + ++ I++V D EY C + V++
Sbjct: 72 WSNPAQQTLYFGEKRALRDNRIQLVTSTPHELSISISNVALADEGEYTCS-IFTMPVRTA 130
Query: 2172 KAELIIMTAPK 2182
K+ + ++ P+
Sbjct: 131 KSLVTVLGIPQ 141
Score = 47.9 bits (113), Expect = 4e-06
Identities = 20/126 (15%), Positives = 37/126 (29%), Gaps = 10/126 (7%)
Query: 69 GKSEPSICTTPVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNG 128
S K + + D D V G + L+C+ +W
Sbjct: 17 MDSPDLGTDDDDKAMADINLSQDDSQPWTSDETVVAGGTVVLKCQVKDHEDSSLQWSNPA 76
Query: 129 REI--------SSGARYRVETAG-GVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVK 179
++ R ++ T+ + + V D G+YTC + S V
Sbjct: 77 QQTLYFGEKRALRDNRIQLVTSTPHELSISISNVALADEGEYTCSIFTM-PVRTAKSLVT 135
Query: 180 IGTPPR 185
+ P+
Sbjct: 136 VLGIPQ 141
Score = 47.9 bits (113), Expect = 4e-06
Identities = 20/126 (15%), Positives = 37/126 (29%), Gaps = 10/126 (7%)
Query: 1676 GKSEPSICTTPVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNG 1735
S K + + D D V G + L+C+ +W
Sbjct: 17 MDSPDLGTDDDDKAMADINLSQDDSQPWTSDETVVAGGTVVLKCQVKDHEDSSLQWSNPA 76
Query: 1736 REI--------SSGARYRVETAG-GVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVK 1786
++ R ++ T+ + + V D G+YTC + S V
Sbjct: 77 QQTLYFGEKRALRDNRIQLVTSTPHELSISISNVALADEGEYTCSIFTM-PVRTAKSLVT 135
Query: 1787 IGTPPR 1792
+ P+
Sbjct: 136 VLGIPQ 141
Score = 46.7 bits (110), Expect = 8e-06
Identities = 26/129 (20%), Positives = 38/129 (29%), Gaps = 9/129 (6%)
Query: 1115 GQGPWSSSSDIIMCCAPPCAPKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIW---- 1170
P + D A + S D TV+AG + + W
Sbjct: 17 MDSPDLGTDDDDKAMADINLSQDDSQPWTSDETVVAGGTVVLKCQVKDHEDSSLQWSNPA 76
Query: 1171 ----TVNGDEVSPDGRIKFETSENQTIYRNKSAKRATDSGSYTIQLVNTVGSDSASCKVY 1226
D RI+ TS + + S D G YT + T+ +A V
Sbjct: 77 QQTLYFGEKRALRDNRIQLVTSTPHELSISISNVALADEGEYTCS-IFTMPVRTAKSLVT 135
Query: 1227 VVDKPSPPQ 1235
V+ P P
Sbjct: 136 VLGIPQKPI 144
Score = 31.3 bits (70), Expect = 1.7
Identities = 18/106 (16%), Positives = 31/106 (29%), Gaps = 14/106 (13%)
Query: 1399 MNSSNSEPGKQSGPVIVEEQPNKPVMDLSGVRDITVKAGEDFSIHVPFMAFPQPAAFWFA 1458
M+S + G + + D TV AG + + W
Sbjct: 17 MDSPDL--GTDDDDKAMADINLSQDDSQPWTSDETVVAGGTVVLKCQVKDHEDSSLQWSN 74
Query: 1459 NDSII-------DDSDTRVHKQLTMNSA---SLVVKNSQRSDGGQY 1494
D R+ QL ++ S+ + N +D G+Y
Sbjct: 75 PAQQTLYFGEKRALRDNRI--QLVTSTPHELSISISNVALADEGEY 118
Score = 29.4 bits (65), Expect = 7.6
Identities = 13/69 (18%), Positives = 26/69 (37%), Gaps = 8/69 (11%)
Query: 217 LTKNGRVVQSDDRFK--FTVLDDYIIIFIKEIRKEDAGDYT--VNLSNSSGSVSGTFTIN 272
L + D+R + + + I I + D G+YT + + + +
Sbjct: 80 LYFGEKRALRDNRIQLVTSTPHELSIS-ISNVALADEGEYTCSI---FTMPVRTAKSLVT 135
Query: 273 ITGLPGPPI 281
+ G+P PI
Sbjct: 136 VLGIPQKPI 144
Score = 29.4 bits (65), Expect = 7.6
Identities = 13/69 (18%), Positives = 26/69 (37%), Gaps = 8/69 (11%)
Query: 1824 LTKNGRVVQSDDRFK--FTVLDDYIIIFIKEIRKEDAGDYT--VNLSNSSGSVSGTFTIN 1879
L + D+R + + + I I + D G+YT + + + +
Sbjct: 80 LYFGEKRALRDNRIQLVTSTPHELSIS-ISNVALADEGEYTCSI---FTMPVRTAKSLVT 135
Query: 1880 ITGLPGPPI 1888
+ G+P PI
Sbjct: 136 VLGIPQKPI 144
>3n1f_C Cell adhesion molecule-related/DOWN-regulated BY; binding sites,
calcium, cell adhesion molecules, cell cycle cell LINE,
conserved sequence; 1.60A {Homo sapiens} PDB: 3d1m_C
3n1q_C 3n1m_C 3n1g_C 3n1p_C
Length = 102
Score = 48.1 bits (115), Expect = 1e-06
Identities = 18/99 (18%), Positives = 32/99 (32%), Gaps = 10/99 (10%)
Query: 672 PPQFPTVEDIGHDSLALVWRAPIWD-GGSNITNYIV---EKREHPMSSWIRV---GNTRF 724
P E + + L W + I + + S + R G+ ++
Sbjct: 7 GPHIAYTEAVSDTQIMLKWTYIPSSNNNTPIQGFYIYYRPTDSDNDSDYKRDVVEGSKQW 66
Query: 725 TTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTK 763
I L P Y+ ++ N G S+ S + TK
Sbjct: 67 HM--IGHLQPETSYDIKMQCFNEGGESEFSNVM-ICETK 102
Score = 47.8 bits (114), Expect = 1e-06
Identities = 11/90 (12%), Positives = 22/90 (24%), Gaps = 6/90 (6%)
Query: 279 PPIGPLDVS--EITKHTCTLHWN-PPKYDGGLKVTHYVV---ERRDISMPHWICISTTCH 332
P GP ++ L W P + + + + + +
Sbjct: 4 PITGPHIAYTEAVSDTQIMLKWTYIPSSNNNTPIQGFYIYYRPTDSDNDSDYKRDVVEGS 63
Query: 333 DTTFIVQGLTEGQEYLFHVMAVNENGMGPP 362
++ L Y + NE G
Sbjct: 64 KQWHMIGHLQPETSYDIKMQCFNEGGESEF 93
Score = 47.8 bits (114), Expect = 1e-06
Identities = 11/90 (12%), Positives = 22/90 (24%), Gaps = 6/90 (6%)
Query: 1886 PPIGPLDVS--EITKHTCTLHWN-PPKYDGGLKVTHYVV---ERRDISMPHWICISTTCH 1939
P GP ++ L W P + + + + + +
Sbjct: 4 PITGPHIAYTEAVSDTQIMLKWTYIPSSNNNTPIQGFYIYYRPTDSDNDSDYKRDVVEGS 63
Query: 1940 DTTFIVQGLTEGQEYLFHVMAVNENGMGPP 1969
++ L Y + NE G
Sbjct: 64 KQWHMIGHLQPETSYDIKMQCFNEGGESEF 93
Score = 47.0 bits (112), Expect = 3e-06
Identities = 13/87 (14%), Positives = 34/87 (39%), Gaps = 4/87 (4%)
Query: 904 PPENLHADEFAGDSLTLYWT-PPRDNGGSEITNYVV---EKKDYNSTVWTKVSSYVTTPF 959
P + + + + L WT P N + I + + N + + + + +
Sbjct: 7 GPHIAYTEAVSDTQIMLKWTYIPSSNNNTPIQGFYIYYRPTDSDNDSDYKRDVVEGSKQW 66
Query: 960 VRVRNLAIGSTYEFRVMAENQYGLSKP 986
+ +L ++Y+ ++ N+ G S+
Sbjct: 67 HMIGHLQPETSYDIKMQCFNEGGESEF 93
Score = 47.0 bits (112), Expect = 3e-06
Identities = 14/90 (15%), Positives = 29/90 (32%), Gaps = 6/90 (6%)
Query: 1233 PPQGPLDVS--DITPESCSLSWK-PPLDDGGSPITNYVV---EKYESATGFWSKLSSFVR 1286
P GP ++ L W P + +PI + + + +
Sbjct: 4 PITGPHIAYTEAVSDTQIMLKWTYIPSSNNNTPIQGFYIYYRPTDSDNDSDYKRDVVEGS 63
Query: 1287 SPAYDVFGLETNRQYRFRVRAENQYGVSEP 1316
+ + L+ Y +++ N+ G SE
Sbjct: 64 KQWHMIGHLQPETSYDIKMQCFNEGGESEF 93
Score = 46.6 bits (111), Expect = 3e-06
Identities = 21/91 (23%), Positives = 34/91 (37%), Gaps = 3/91 (3%)
Query: 378 PSPPGIPVVTQVGGDFVNLSWDK-PLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQ 436
+ P I V + L W P + + IQG++I SD + S+
Sbjct: 5 ITGPHIAYTEAVSDTQIMLKWTYIPSSNNNTPIQGFYIYYRPTDSDNDSDYKRDVVEGSK 64
Query: 437 --INIPNLIEGRQYEFRVYAQNEAGLSLPSS 465
I +L Y+ ++ NE G S S+
Sbjct: 65 QWHMIGHLQPETSYDIKMQCFNEGGESEFSN 95
Score = 46.6 bits (111), Expect = 3e-06
Identities = 21/91 (23%), Positives = 34/91 (37%), Gaps = 3/91 (3%)
Query: 1985 PSPPGIPVVTQVGGDFVNLSWDK-PLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQ 2043
+ P I V + L W P + + IQG++I SD + S+
Sbjct: 5 ITGPHIAYTEAVSDTQIMLKWTYIPSSNNNTPIQGFYIYYRPTDSDNDSDYKRDVVEGSK 64
Query: 2044 --INIPNLIEGRQYEFRVYAQNEAGLSLPSS 2072
I +L Y+ ++ NE G S S+
Sbjct: 65 QWHMIGHLQPETSYDIKMQCFNEGGESEFSN 95
Score = 39.7 bits (93), Expect = 0.001
Identities = 16/125 (12%), Positives = 34/125 (27%), Gaps = 36/125 (28%)
Query: 1001 VPGAPGAPKGVD---STEDSISLVWSK-PRHDGGSPIQRYIVEKRLISDDKWIKASMAHI 1056
P P ++ I L W+ P + +PIQ + + R D +
Sbjct: 3 TPITG--PHIAYTEAVSDTQIMLKWTYIPSSNNNTPIQGFYIYYRPTDSDNDSDYKRDVV 60
Query: 1057 PDTSLKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQ 1116
+ +++ L Y+ ++ N G+
Sbjct: 61 EGSKQWHMI------------------------------GHLQPETSYDIKMQCFNEGGE 90
Query: 1117 GPWSS 1121
+S+
Sbjct: 91 SEFSN 95
Score = 29.6 bits (67), Expect = 3.6
Identities = 8/36 (22%), Positives = 13/36 (36%), Gaps = 3/36 (8%)
Query: 46 SFSVLNLVEGNDYEFRIIAVNAIG---KSEPSICTT 78
+ +L Y+ ++ N G S IC T
Sbjct: 66 WHMIGHLQPETSYDIKMQCFNEGGESEFSNVMICET 101
Score = 29.6 bits (67), Expect = 3.6
Identities = 8/36 (22%), Positives = 13/36 (36%), Gaps = 3/36 (8%)
Query: 1653 SFSVLNLVEGNDYEFRIIAVNAIG---KSEPSICTT 1685
+ +L Y+ ++ N G S IC T
Sbjct: 66 WHMIGHLQPETSYDIKMQCFNEGGESEFSNVMICET 101
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP
kinase, PMK, STK26, stress-activated protein kinase,
structural genomics, PSI; 2.09A {Homo sapiens}
Length = 353
Score = 51.9 bits (125), Expect = 1e-06
Identities = 17/91 (18%), Positives = 38/91 (41%), Gaps = 8/91 (8%)
Query: 818 VYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFI--PVSHNLEKELIRKEIDIMNQLH 875
+ Y +G+GA+G V ++++G A K + P + + +E+ ++ +
Sbjct: 22 LPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQ 81
Query: 876 HPKLINLHDAF------EDDDEMVLIFEVLD 900
H +I L D F + + L+ +
Sbjct: 82 HENVIGLLDVFTPASSLRNFYDFYLVMPFMQ 112
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding,
tyrosine-protein kinase, proto-oncogene, phosphoprotein,
disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo
sapiens}
Length = 326
Score = 52.0 bits (125), Expect = 1e-06
Identities = 20/91 (21%), Positives = 31/91 (34%), Gaps = 11/91 (12%)
Query: 804 SKYVPQPVDIKTSSVYDHYDI-------LEEIGTGAFGVVHRCR----ERKTGNIFAAKF 852
Q D L+++G G FG V CR + TG + A K
Sbjct: 18 ENLYFQGAMGSAFEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKK 77
Query: 853 IPVSHNLEKELIRKEIDIMNQLHHPKLINLH 883
+ S +EI+I+ L H ++
Sbjct: 78 LQHSTEEHLRDFEREIEILKSLQHDNIVKYK 108
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative
splicing, cell adhesion, cell membrane, glycoprotein,
HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R
3epc_R* 3epd_R* 3epf_R*
Length = 221
Score = 50.5 bits (120), Expect = 1e-06
Identities = 27/226 (11%), Positives = 59/226 (26%), Gaps = 37/226 (16%)
Query: 482 EIIVPLRNANAIQNHNAQFQCTITGCPKPT-----ISWLK-------------GSREITP 523
+ P + C + ++W + +
Sbjct: 2 VVQAP-TQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSE 60
Query: 524 SARHHIFAEGDT-----YTLIINSVYGVDADEYVCRAVNKG-GVKSTKAELIIMTAPKFN 577
S R A +L + + D Y C V G +S L ++ P+
Sbjct: 61 SKRLEFVAARLGAELRDASLRMFGLRVEDEGSYTCLFVTFPQGSRSVDIWLRVLAKPQ-- 118
Query: 578 VPPRFRDTAYFDKGENVVVK-IPFTGYPKPKITWYRDNEVIESGGHFHVETSER---HAI 633
+ + + G P +ITW+ D + S ++
Sbjct: 119 -NTAEVQKVQLTGEPVPMARCVSTGGRPPAQITWHSDLGGMPQTSQVPGFLSGTVTVTSL 177
Query: 634 LTIRDASNVDTAPYRVVAENDLGMDSAIVKIQISDRPDPPQFPTVE 679
+ +S VD E++ ++ + ++ +P
Sbjct: 178 WILVPSSQVDGKQVTCKVEHESFEKPQLLTVSLT-----VYYPHHH 218
Score = 41.2 bits (96), Expect = 0.002
Identities = 16/95 (16%), Positives = 32/95 (33%), Gaps = 6/95 (6%)
Query: 2088 PEIIVPLRNANAIQNHNAQFQCTITG-CPKPTISWLKGSREITPSARHHIFAEGDTYT-- 2144
P+ ++ +C TG P I+W + +++ F G T T
Sbjct: 117 PQNTAEVQKVQLTGEPVPMARCVSTGGRPPAQITWHSDLGGMPQTSQVPGFLSG-TVTVT 175
Query: 2145 --LIINSVYGVDADEYVCRAVNKGGVKSTKAELII 2177
I+ VD + C+ ++ K + +
Sbjct: 176 SLWILVPSSQVDGKQVTCKVEHESFEKPQLLTVSL 210
Score = 40.1 bits (93), Expect = 0.004
Identities = 28/213 (13%), Positives = 56/213 (26%), Gaps = 36/213 (16%)
Query: 94 IVPLKDLVVPLGKLLTLQCEATGTPVPKC-----RWLRN-------------GREISSGA 135
+ + LG +TL C + W R+ G S
Sbjct: 3 VQAPTQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESK 62
Query: 136 RYRVETAG-----GVFRLHFNEVTDVDNGDYTCEAYNS-VGFAHTSSRVKIGTPPRIDRM 189
R A L + D G YTC G +++ P+
Sbjct: 63 RLEFVAARLGAELRDASLRMFGLRVEDEGSYTCLFVTFPQGSRSVDIWLRVLAKPQNTAE 122
Query: 190 PNALYIPEGDNTKVKIFYAGDQPM-EVSLTKNGRVVQSDDRFK------FTVLDDYIIIF 242
+ + + G +P +++ + + + TV +I
Sbjct: 123 VQKVQLTGEPVPMARCVSTGGRPPAQITWHSDLGGMPQTSQVPGFLSGTVTVTSLWI--- 179
Query: 243 IKEIRKEDAGDYTVNLSNSS--GSVSGTFTINI 273
+ + D T + + S T ++ +
Sbjct: 180 LVPSSQVDGKQVTCKVEHESFEKPQLLTVSLTV 212
Score = 40.1 bits (93), Expect = 0.004
Identities = 28/213 (13%), Positives = 56/213 (26%), Gaps = 36/213 (16%)
Query: 1701 IVPLKDLVVPLGKLLTLQCEATGTPVPKC-----RWLRN-------------GREISSGA 1742
+ + LG +TL C + W R+ G S
Sbjct: 3 VQAPTQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESK 62
Query: 1743 RYRVETAG-----GVFRLHFNEVTDVDNGDYTCEAYNS-VGFAHTSSRVKIGTPPRIDRM 1796
R A L + D G YTC G +++ P+
Sbjct: 63 RLEFVAARLGAELRDASLRMFGLRVEDEGSYTCLFVTFPQGSRSVDIWLRVLAKPQNTAE 122
Query: 1797 PNALYIPEGDNTKVKIFYAGDQPM-EVSLTKNGRVVQSDDRFK------FTVLDDYIIIF 1849
+ + + G +P +++ + + + TV +I
Sbjct: 123 VQKVQLTGEPVPMARCVSTGGRPPAQITWHSDLGGMPQTSQVPGFLSGTVTVTSLWI--- 179
Query: 1850 IKEIRKEDAGDYTVNLSNSS--GSVSGTFTINI 1880
+ + D T + + S T ++ +
Sbjct: 180 LVPSSQVDGKQVTCKVEHESFEKPQLLTVSLTV 212
Score = 32.4 bits (73), Expect = 1.5
Identities = 18/141 (12%), Positives = 34/141 (24%), Gaps = 27/141 (19%)
Query: 2089 EIIVPLRNANAIQNHNAQFQCTITGCPKPT-----ISWLK-------------GSREITP 2130
+ P + C + ++W + +
Sbjct: 2 VVQAP-TQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSE 60
Query: 2131 SARHHIFAEGDT-----YTLIINSVYGVDADEYVCRAVNKG-GVKSTKAELIIMTAPKFN 2184
S R A +L + + D Y C V G +S L ++ P+
Sbjct: 61 SKRLEFVAARLGAELRDASLRMFGLRVEDEGSYTCLFVTFPQGSRSVDIWLRVLAKPQNT 120
Query: 2185 VPPRFRDTAYFESDVVVVVCV 2205
+ V + CV
Sbjct: 121 AEV--QKVQLTGEPVPMARCV 139
>3up1_A Interleukin-7 receptor subunit alpha; cytokine receptor, fibronectin
type 3 fold, membrane and SOL glycosylation, immune
system; HET: NAG FUC NGA; 2.15A {Homo sapiens} PDB:
3di3_B* 3di2_B*
Length = 223
Score = 50.6 bits (120), Expect = 1e-06
Identities = 17/112 (15%), Positives = 33/112 (29%), Gaps = 5/112 (4%)
Query: 1208 YTIQLVNTVGSDSASCKVYVVD---KPSPPQGPLDVSDITPESCSLSWKPP-LDDGGSPI 1263
+ VG S +CK + KP P V +++ L +
Sbjct: 87 GKSNICVKVGEKSLTCKKIDLTTIVKPEAPFDLSVVYREGANDFVVTFNTSHLQKKYVKV 146
Query: 1264 TNYVVE-KYESATGFWSKLSSFVRSPAYDVFGLETNRQYRFRVRAENQYGVS 1314
+ V + E W+ ++ L+ Y +VR+ +
Sbjct: 147 LMHDVAYRQEKDENKWTHVNLSSTKLTLLQRKLQPAAMYEIKVRSIPDHYFK 198
Score = 46.7 bits (110), Expect = 3e-05
Identities = 14/103 (13%), Positives = 32/103 (31%), Gaps = 7/103 (6%)
Query: 647 YRVVAENDLGM---DSAIVKIQISDRPDPPQFPTVE-DIGHDSLALVWRAP-IWDGGSNI 701
+ +G + + +P+ P +V G + + + + +
Sbjct: 87 GKSNICVKVGEKSLTCKKIDLTTIVKPEAPFDLSVVYREGANDFVVTFNTSHLQKKYVKV 146
Query: 702 TNYIVEKREHPMSSWIRVGNTRFTTMAIT--GLSPGHQYEFRV 742
+ V R+ + N T + + L P YE +V
Sbjct: 147 LMHDVAYRQEKDENKWTHVNLSSTKLTLLQRKLQPAAMYEIKV 189
Score = 45.9 bits (108), Expect = 6e-05
Identities = 15/101 (14%), Positives = 35/101 (34%), Gaps = 5/101 (4%)
Query: 880 INLHDAFEDDDEMVLIFEVLD--RPHPPENLHADEFAG-DSLTLYWTPP-RDNGGSEITN 935
N+ + ++ +P P +L G + + + ++
Sbjct: 89 SNICVKVGEKSLTCKKIDLTTIVKPEAPFDLSVVYREGANDFVVTFNTSHLQKKYVKVLM 148
Query: 936 YVVE-KKDYNSTVWTKVSSYVTTPFVRVRNLAIGSTYEFRV 975
+ V +++ + WT V+ T + R L + YE +V
Sbjct: 149 HDVAYRQEKDENKWTHVNLSSTKLTLLQRKLQPAAMYEIKV 189
Score = 44.0 bits (103), Expect = 2e-04
Identities = 14/103 (13%), Positives = 28/103 (27%), Gaps = 5/103 (4%)
Query: 254 YTVNLSNSSG---SVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPP--KYDGGLK 308
N+ G + P P V + + +N +
Sbjct: 87 GKSNICVKVGEKSLTCKKIDLTTIVKPEAPFDLSVVYREGANDFVVTFNTSHLQKKYVKV 146
Query: 309 VTHYVVERRDISMPHWICISTTCHDTTFIVQGLTEGQEYLFHV 351
+ H V R++ W ++ + T + + L Y V
Sbjct: 147 LMHDVAYRQEKDENKWTHVNLSSTKLTLLQRKLQPAAMYEIKV 189
Score = 44.0 bits (103), Expect = 2e-04
Identities = 14/103 (13%), Positives = 28/103 (27%), Gaps = 5/103 (4%)
Query: 1861 YTVNLSNSSG---SVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPP--KYDGGLK 1915
N+ G + P P V + + +N +
Sbjct: 87 GKSNICVKVGEKSLTCKKIDLTTIVKPEAPFDLSVVYREGANDFVVTFNTSHLQKKYVKV 146
Query: 1916 VTHYVVERRDISMPHWICISTTCHDTTFIVQGLTEGQEYLFHV 1958
+ H V R++ W ++ + T + + L Y V
Sbjct: 147 LMHDVAYRQEKDENKWTHVNLSSTKLTLLQRKLQPAAMYEIKV 189
Score = 40.9 bits (95), Expect = 0.002
Identities = 25/191 (13%), Positives = 59/191 (30%), Gaps = 17/191 (8%)
Query: 290 TKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHDTTFIVQGLTEGQEYLF 349
++H+ T + P + ++ ++ + T +
Sbjct: 35 SQHSLTCAFEDPDVNTTNLEFEICGALVEVKCLNFRKLQEIYFIETKKFL-------LIG 87
Query: 350 HVMAVNENGMGPPLEG-INPIKAKSPYDKPSPP-GIPVVTQVGGDFVNLSWDKP-LDDGG 406
+ G I+ KP P + VV + G + ++++ L
Sbjct: 88 KSNICVKVGEKSLTCKKIDLTT----IVKPEAPFDLSVVYREGANDFVVTFNTSHLQKKY 143
Query: 407 SRIQGYWID-KHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSS 465
++ + + + E + W VN++ + + L YE +V + + S
Sbjct: 144 VKVLMHDVAYRQEKDENKWTHVNLSSTKLT-LLQRKLQPAAMYEIKVRSIPDHYFKGFWS 202
Query: 466 A-SNSVQIKDP 475
S S + P
Sbjct: 203 EWSPSYYFRTP 213
Score = 40.9 bits (95), Expect = 0.002
Identities = 25/191 (13%), Positives = 59/191 (30%), Gaps = 17/191 (8%)
Query: 1897 TKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHDTTFIVQGLTEGQEYLF 1956
++H+ T + P + ++ ++ + T +
Sbjct: 35 SQHSLTCAFEDPDVNTTNLEFEICGALVEVKCLNFRKLQEIYFIETKKFL-------LIG 87
Query: 1957 HVMAVNENGMGPPLEG-INPIKAKSPYDKPSPP-GIPVVTQVGGDFVNLSWDKP-LDDGG 2013
+ G I+ KP P + VV + G + ++++ L
Sbjct: 88 KSNICVKVGEKSLTCKKIDLTT----IVKPEAPFDLSVVYREGANDFVVTFNTSHLQKKY 143
Query: 2014 SRIQGYWID-KHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSS 2072
++ + + + E + W VN++ + + L YE +V + + S
Sbjct: 144 VKVLMHDVAYRQEKDENKWTHVNLSSTKLT-LLQRKLQPAAMYEIKVRSIPDHYFKGFWS 202
Query: 2073 A-SNSVQIKDP 2082
S S + P
Sbjct: 203 EWSPSYYFRTP 213
Score = 38.2 bits (88), Expect = 0.016
Identities = 26/212 (12%), Positives = 51/212 (24%), Gaps = 43/212 (20%)
Query: 917 SLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTKVSSYVTTPFVRVRNLAIGSTYEFRVM 976
SLT + P N + + + K+ F+ + + V
Sbjct: 38 SLTCAFEDPDVNTTNLEFEICGALVEVKCLNFRKLQEIY---FIETKKFLLIGKSNICVK 94
Query: 977 AENQYGLSKPALTIDPIKAKHPFDVPGAPGAPKGVDSTEDSISLVWSKPRH-DGGSPIQR 1035
+ K +K + PFD+ + + ++ +
Sbjct: 95 VGEKSLTCKKIDLTTIVKPEAPFDLSVVY------REGANDFVVTFNTSHLQKKYVKVLM 148
Query: 1036 YIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRV 1095
+ V R D+ ++ T L +
Sbjct: 149 HDVAYRQEKDENKWT--HVNLSSTKLTLLQR----------------------------- 177
Query: 1096 TSLIENHEYEFRV-CAVNAAGQGPWSSSSDII 1126
L YE +V + +G WS S
Sbjct: 178 -KLQPAAMYEIKVRSIPDHYFKGFWSEWSPSY 208
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN
inhibitor, ATP-binding mutation, membrane,
nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A
{Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A*
Length = 327
Score = 51.6 bits (124), Expect = 1e-06
Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 4/64 (6%)
Query: 824 ILEEIGTGAFGVVHRCR----ERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQLHHPKL 879
+ ++G G FG V CR TG + A K + S ++ ++EI I+ LH +
Sbjct: 27 YISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFI 86
Query: 880 INLH 883
+
Sbjct: 87 VKYR 90
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in
transferase-transferase inhibitor complex; HET: JBI;
2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Length = 464
Score = 52.2 bits (125), Expect = 1e-06
Identities = 22/91 (24%), Positives = 43/91 (47%), Gaps = 8/91 (8%)
Query: 818 VYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFI--PVSHNLEKELIRKEIDIMNQLH 875
V Y L+ IG+GA G+V + A K + P + + +E+ +M ++
Sbjct: 60 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN 119
Query: 876 HPKLINLHDAF------EDDDEMVLIFEVLD 900
H +I+L + F E+ ++ L+ E++D
Sbjct: 120 HKNIISLLNVFTPQKTLEEFQDVYLVMELMD 150
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP
binding, transferase-transfera inhibitor complex; HET:
046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A*
3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A*
3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A*
Length = 295
Score = 51.5 bits (124), Expect = 1e-06
Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 4/64 (6%)
Query: 824 ILEEIGTGAFGVVHRCR----ERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQLHHPKL 879
L+++G G FG V CR + TG + A K + S +EI+I+ L H +
Sbjct: 14 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 73
Query: 880 INLH 883
+
Sbjct: 74 VKYK 77
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP
kinase insertion, autophosphorylation, transferase; HET:
BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X*
2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A*
2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A*
3l8x_A* 3mvl_A* 3mvm_A* ...
Length = 367
Score = 52.0 bits (125), Expect = 2e-06
Identities = 23/104 (22%), Positives = 47/104 (45%), Gaps = 8/104 (7%)
Query: 805 KYVPQPVDIKTSSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFI--PVSHNLEKE 862
+ Q ++ V + Y L +G+GA+G V + KTG A K + P + +
Sbjct: 14 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 73
Query: 863 LIRKEIDIMNQLHHPKLINLHDAF------EDDDEMVLIFEVLD 900
+E+ ++ + H +I L D F E+ +++ L+ ++
Sbjct: 74 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG 117
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition,
allosteric inhibitor, kinase inhibitor hydrophobic
collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB:
3o96_A*
Length = 446
Score = 52.0 bits (125), Expect = 2e-06
Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 15/87 (17%)
Query: 820 DHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELI--RKEID-------I 870
+ ++ L+ +G G FG V +E+ TG +A K L+KE+I + E+ +
Sbjct: 148 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKI------LKKEVIVAKDEVAHTLTENRV 201
Query: 871 MNQLHHPKLINLHDAFEDDDEMVLIFE 897
+ HP L L +F+ D + + E
Sbjct: 202 LQNSRHPFLTALKYSFQTHDRLCFVME 228
>3dlq_R Interleukin-22 receptor subunit alpha-1; cytokine-receptor complex,
fibronectin-III, cytokine, glycoprotein, polymorphism,
secreted, membrane; 1.90A {Homo sapiens} PDB: 3dgc_R*
Length = 211
Score = 49.7 bits (118), Expect = 2e-06
Identities = 25/197 (12%), Positives = 50/197 (25%), Gaps = 23/197 (11%)
Query: 277 PGPPIGPLDVS-EITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWI----CISTTC 331
P V + + L W+ G T Y +E + W+ C T
Sbjct: 2 EDPSDLLQHVKFQSSNFENILTWDSGP--EGTPDTVYSIEYKTYGERDWVAKKGCQRITR 59
Query: 332 HDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYD--KPSPPGIPVVTQV 389
V+ + Y V AV+ G S PP + +++V
Sbjct: 60 KSCNLTVETGNLTELYYARVTAVSAGGRSATKM----TDRFSSLQHTTLKPPDVTCISKV 115
Query: 390 GGDFVNLSWDKPL--DDGGSRI---QGYWIDKHEVG---SDAWQRVNVAICAPSQINIPN 441
+ + G R+ + + + + +Q +
Sbjct: 116 RSIQMIVHPTPTPIRAGDGHRLTLEDIFHDLFYHLELQVNRTYQMHLGG--KQREYEFFG 173
Query: 442 LIEGRQYEFRVYAQNEA 458
L ++ +
Sbjct: 174 LTPDTEFLGTIMILVPT 190
Score = 49.7 bits (118), Expect = 2e-06
Identities = 25/197 (12%), Positives = 50/197 (25%), Gaps = 23/197 (11%)
Query: 1884 PGPPIGPLDVS-EITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWI----CISTTC 1938
P V + + L W+ G T Y +E + W+ C T
Sbjct: 2 EDPSDLLQHVKFQSSNFENILTWDSGP--EGTPDTVYSIEYKTYGERDWVAKKGCQRITR 59
Query: 1939 HDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYD--KPSPPGIPVVTQV 1996
V+ + Y V AV+ G S PP + +++V
Sbjct: 60 KSCNLTVETGNLTELYYARVTAVSAGGRSATKM----TDRFSSLQHTTLKPPDVTCISKV 115
Query: 1997 GGDFVNLSWDKPL--DDGGSRI---QGYWIDKHEVG---SDAWQRVNVAICAPSQINIPN 2048
+ + G R+ + + + + +Q +
Sbjct: 116 RSIQMIVHPTPTPIRAGDGHRLTLEDIFHDLFYHLELQVNRTYQMHLGG--KQREYEFFG 173
Query: 2049 LIEGRQYEFRVYAQNEA 2065
L ++ +
Sbjct: 174 LTPDTEFLGTIMILVPT 190
Score = 43.5 bits (102), Expect = 3e-04
Identities = 20/104 (19%), Positives = 36/104 (34%), Gaps = 8/104 (7%)
Query: 667 SDRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSWIRVG---NTR 723
D D Q + +++ L W + G+ T Y +E + + W+
Sbjct: 2 EDPSDLLQHVKFQSSNFENI-LTWDSG--PEGTPDTVYSIEYKTYGERDWVAKKGCQRIT 58
Query: 724 FTTMAITG--LSPGHQYEFRVYAENVYGRSDPSTTSDLITTKDT 765
+ +T + Y RV A + GRS T + + T
Sbjct: 59 RKSCNLTVETGNLTELYYARVTAVSAGGRSATKMTDRFSSLQHT 102
Score = 41.6 bits (97), Expect = 0.001
Identities = 24/132 (18%), Positives = 37/132 (28%), Gaps = 13/132 (9%)
Query: 900 DRPHPPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTKVS--SYVTT 957
D +++ L W G+ T Y +E K Y W +T
Sbjct: 3 DPSDLLQHVKFQSS-NFENILTWDSG--PEGTPDTVYSIEYKTYGERDWVAKKGCQRITR 59
Query: 958 PF--VRVRNLAIGSTYEFRVMAENQYGLSKPALTIDPIKAKHPFDVPGAPGAPK-GVDST 1014
+ V + Y RV A + G S +T +H P S
Sbjct: 60 KSCNLTVETGNLTELYYARVTAVSAGGRSATKMTDRFSSLQH-----TTLKPPDVTCISK 114
Query: 1015 EDSISLVWSKPR 1026
SI ++
Sbjct: 115 VRSIQMIVHPTP 126
Score = 36.6 bits (84), Expect = 0.056
Identities = 20/123 (16%), Positives = 39/123 (31%), Gaps = 16/123 (13%)
Query: 1095 VTSLIEN--HEYEFRVCAVNAAGQGPWSSSSDIIMCC-APPCAPKITSDLSIRDMTVLAG 1151
+T N Y RV AV+A G+ + P +T
Sbjct: 64 LTVETGNLTELYYARVTAVSAGGRSATKMTDRFSSLQHTTLKPPDVT----------CIS 113
Query: 1152 EEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQTIYRNKSAKRATDSGSYTIQ 1211
+ +I + P PTPI +G ++ + I + + + N++ + +
Sbjct: 114 KVRSIQMIVH--PTPTPIRAGDGHRLTLE-DIFHDLFYHLELQVNRTYQMHLGGKQREYE 170
Query: 1212 LVN 1214
Sbjct: 171 FFG 173
Score = 33.9 bits (77), Expect = 0.38
Identities = 19/93 (20%), Positives = 27/93 (29%), Gaps = 12/93 (12%)
Query: 1250 LSWKPPLDDGGSPITNYVVEKYESATGFWSKLS--SFVRSPAYDVFGLETNR--QYRFRV 1305
L+W G+P T Y +E W + + ++ N Y RV
Sbjct: 22 LTWDSG--PEGTPDTVYSIEYKTYGERDWVAKKGCQRITRKSCNLTVETGNLTELYYARV 79
Query: 1306 RAENQYGVSEPLELDNSITAKFPF--TVPDPPG 1336
A + G S D T PP
Sbjct: 80 TAVSAGGRSATKMTDR----FSSLQHTTLKPPD 108
Score = 32.0 bits (72), Expect = 1.4
Identities = 15/56 (26%), Positives = 22/56 (39%), Gaps = 3/56 (5%)
Query: 22 YIIERREVGGAIWLK---CNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGKSEPS 74
Y IE + G W+ C C+ +V Y R+ AV+A G+S
Sbjct: 36 YSIEYKTYGERDWVAKKGCQRITRKSCNLTVETGNLTELYYARVTAVSAGGRSATK 91
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor,
ATP-binding, nucleotide-binding, oncogene, TRAN; HET:
B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A*
1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A*
3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A*
3oy3_A* 2hiw_A* 2v7a_A* ...
Length = 288
Score = 50.7 bits (122), Expect = 2e-06
Identities = 15/60 (25%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Query: 824 ILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQLHHPKLINLH 883
+ ++G G +G V+ +K A K + +E + KE +M ++ HP L+ L
Sbjct: 17 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFL-KEAAVMKEIKHPNLVQLL 75
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1;
transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP:
b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Length = 495
Score = 51.3 bits (123), Expect = 3e-06
Identities = 15/60 (25%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Query: 824 ILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQLHHPKLINLH 883
+ ++G G +G V+ +K A K + +E + KE +M ++ HP L+ L
Sbjct: 224 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFL-KEAAVMKEIKHPNLVQLL 282
>1uen_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold,
fibronectin type III, NG-CAM related cell adhesion
molecule, structural genomics; NMR {Homo sapiens} SCOP:
b.1.2.1
Length = 125
Score = 47.8 bits (114), Expect = 3e-06
Identities = 20/116 (17%), Positives = 35/116 (30%), Gaps = 17/116 (14%)
Query: 278 GPPIGPLDVSEITKHTCTLHWNPPKYD---GGLKVTHYVV--------ERRDISMPHWIC 326
P + V+ + +HW+P G + Y + +R+
Sbjct: 16 VAPGN-VRVNVVNSTLAEVHWDPVPLKSIRG--HLQGYRIYYWKTQSSSKRNRRHIEKKI 72
Query: 327 ISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPG 382
++ T ++ GL Y +V VN G GP +P G
Sbjct: 73 LTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASP---DRVFNTPEGSGPSSG 125
Score = 47.8 bits (114), Expect = 3e-06
Identities = 20/116 (17%), Positives = 35/116 (30%), Gaps = 17/116 (14%)
Query: 1885 GPPIGPLDVSEITKHTCTLHWNPPKYD---GGLKVTHYVV--------ERRDISMPHWIC 1933
P + V+ + +HW+P G + Y + +R+
Sbjct: 16 VAPGN-VRVNVVNSTLAEVHWDPVPLKSIRG--HLQGYRIYYWKTQSSSKRNRRHIEKKI 72
Query: 1934 ISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPG 1989
++ T ++ GL Y +V VN G GP +P G
Sbjct: 73 LTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASP---DRVFNTPEGSGPSSG 125
Score = 42.0 bits (99), Expect = 2e-04
Identities = 15/114 (13%), Positives = 29/114 (25%), Gaps = 16/114 (14%)
Query: 904 PPENLHADEFAGDSLTLYWTPP---RDNGGSEITNYVV--------EKKDYNSTVWTKVS 952
P N+ + ++W P G + Y + K++ ++
Sbjct: 17 APGNVRVNVVNSTLAEVHWDPVPLKSIRG--HLQGYRIYYWKTQSSSKRNRRHIEKKILT 74
Query: 953 SYVTTPFVRVRNLAIGSTYEFRVMAENQYGLSKPALTIDPIKAKHPFDVPGAPG 1006
+ + L S Y V N G + P + G
Sbjct: 75 FQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPAS---PDRVFNTPEGSGPSSG 125
Score = 41.2 bits (97), Expect = 4e-04
Identities = 21/111 (18%), Positives = 29/111 (26%), Gaps = 13/111 (11%)
Query: 367 NPIKAKSPYDKPS-PPGIPVVTQVGGDFVNLSWDKPLDD---GGSRIQGYWI------DK 416
+ S D P PG V V + WD G +QGY I
Sbjct: 3 SGSSGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRG--HLQGYRIYYWKTQSS 60
Query: 417 HEVGSDAWQRVNVAICAPS-QINIPNLIEGRQYEFRVYAQNEAGLSLPSSA 466
+ ++ + +P L Y V N G S
Sbjct: 61 SKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPD 111
Score = 41.2 bits (97), Expect = 4e-04
Identities = 21/111 (18%), Positives = 29/111 (26%), Gaps = 13/111 (11%)
Query: 1974 NPIKAKSPYDKPS-PPGIPVVTQVGGDFVNLSWDKPLDD---GGSRIQGYWI------DK 2023
+ S D P PG V V + WD G +QGY I
Sbjct: 3 SGSSGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRG--HLQGYRIYYWKTQSS 60
Query: 2024 HEVGSDAWQRVNVAICAPS-QINIPNLIEGRQYEFRVYAQNEAGLSLPSSA 2073
+ ++ + +P L Y V N G S
Sbjct: 61 SKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPD 111
Score = 38.9 bits (91), Expect = 0.003
Identities = 19/112 (16%), Positives = 30/112 (26%), Gaps = 17/112 (15%)
Query: 668 DRPD-PPQFPTVEDIGHDSLALVWRAPIWD---GGSNITNYIV----------EKREHPM 713
D P P V + + W G ++ Y + R H
Sbjct: 12 DLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRG--HLQGYRIYYWKTQSSSKRNRRHIE 69
Query: 714 SSWIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKDT 765
+ ++ M + GL P Y V N G S T + +
Sbjct: 70 KKILTFQGSKTHGM-LPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTPEGS 120
Score = 38.5 bits (90), Expect = 0.004
Identities = 18/100 (18%), Positives = 26/100 (26%), Gaps = 15/100 (15%)
Query: 1229 DKPS-PPQGPLDVSDITPESCSLSWKPPLDD---GGSPITNYVV--------EKYESATG 1276
D P P + V+ + + W P G + Y + K
Sbjct: 12 DLPMVAPGN-VRVNVVNSTLAEVHWDPVPLKSIRG--HLQGYRIYYWKTQSSSKRNRRHI 68
Query: 1277 FWSKLSSFVRSPAYDVFGLETNRQYRFRVRAENQYGVSEP 1316
L+ + GLE Y VR N G
Sbjct: 69 EKKILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPA 108
Score = 33.2 bits (76), Expect = 0.26
Identities = 9/28 (32%), Positives = 11/28 (39%)
Query: 1094 RVTSLIENHEYEFRVCAVNAAGQGPWSS 1121
+ L Y V VN G+GP S
Sbjct: 83 MLPGLEPFSHYTLNVRVVNGKGEGPASP 110
>2csp_A RIM-BP2, RIM binding protein 2; FN3 domain, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Length = 130
Score = 47.8 bits (113), Expect = 3e-06
Identities = 31/130 (23%), Positives = 47/130 (36%), Gaps = 15/130 (11%)
Query: 1217 GSDSASCKVYVVDKPSPPQGPLDVS---DITPESCSLSWKPPLDD-----GGSPITNYVV 1268
GS +S + PP P DV+ +TP + +SW+PP+ G+ +T Y V
Sbjct: 1 GSSGSSGVEFSTLPAGPPAPPQDVTVQAGVTPATIRVSWRPPVLTPTGLSNGANVTGYGV 60
Query: 1269 EKYESATGFWSKLSSFVRSPAYDVFGLETNRQYRFRVRAENQYGVSEPLELDNSITAKFP 1328
Y + S A ++ L + VR + G S S A P
Sbjct: 61 --YAKGQRVAEVIFPTADSTAVELVRLRSLEAKGVTVRTLSAQGESVD-----SAVAAVP 113
Query: 1329 FTVPDPPGQP 1338
+ PP
Sbjct: 114 PELLVPPTPH 123
Score = 40.1 bits (93), Expect = 0.001
Identities = 22/91 (24%), Positives = 33/91 (36%), Gaps = 7/91 (7%)
Query: 670 PDPPQFPTVEDIGHDSLALV-WRAPIWD-----GGSNITNYIVEKREHPMSSWIRVGNTR 723
P PPQ TV+ + V WR P+ G+N+T Y V + ++ I
Sbjct: 18 PAPPQDVTVQAGVTPATIRVSWRPPVLTPTGLSNGANVTGYGVYAKGQRVAEVIFP-TAD 76
Query: 724 FTTMAITGLSPGHQYEFRVYAENVYGRSDPS 754
T + + L V + G S S
Sbjct: 77 STAVELVRLRSLEAKGVTVRTLSAQGESVDS 107
Score = 38.2 bits (88), Expect = 0.005
Identities = 27/126 (21%), Positives = 37/126 (29%), Gaps = 10/126 (7%)
Query: 261 SSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYD-----GGLKVTHYVVE 315
SSGS F+ G P PP + +T T + W PP G VT Y V
Sbjct: 2 SSGSSGVEFSTLPAGPPAPPQDVTVQAGVTPATIRVSWRPPVLTPTGLSNGANVTGYGVY 61
Query: 316 RRDISMPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPY 375
+ + I T T + L + V ++ G
Sbjct: 62 AKGQRVAEV--IFPTADSTAVELVRLRSLEAKGVTVRTLSAQGESVDSA---VAAVPPEL 116
Query: 376 DKPSPP 381
P P
Sbjct: 117 LVPPTP 122
Score = 38.2 bits (88), Expect = 0.005
Identities = 27/126 (21%), Positives = 37/126 (29%), Gaps = 10/126 (7%)
Query: 1868 SSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYD-----GGLKVTHYVVE 1922
SSGS F+ G P PP + +T T + W PP G VT Y V
Sbjct: 2 SSGSSGVEFSTLPAGPPAPPQDVTVQAGVTPATIRVSWRPPVLTPTGLSNGANVTGYGVY 61
Query: 1923 RRDISMPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPY 1982
+ + I T T + L + V ++ G
Sbjct: 62 AKGQRVAEV--IFPTADSTAVELVRLRSLEAKGVTVRTLSAQGESVDSA---VAAVPPEL 116
Query: 1983 DKPSPP 1988
P P
Sbjct: 117 LVPPTP 122
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG,
inhibitory receptor, disulfide, immune system; 1.70A
{Homo sapiens}
Length = 196
Score = 49.1 bits (117), Expect = 3e-06
Identities = 25/162 (15%), Positives = 51/162 (31%), Gaps = 12/162 (7%)
Query: 101 VVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGD 160
V+ G +T+ C+ T + R + + +E R +T+ G
Sbjct: 15 VISWGNSVTIWCQGT-LEAREYRLDKEESPAPWDRQNPLEP-KNKARFSIPSMTEDYAGR 72
Query: 161 YTCEAYNSVGFAHTSSRVKIG-----TPPRIDRMPNALYIPEGDNTKVKIFYAGDQP-ME 214
Y C + VG++ S +++ + P + +P+ + G + V + P
Sbjct: 73 YRCYYRSPVGWSQPSDPLELVMTGAYSKPTLSALPSP-LVTSGKS--VTLLCQSRSPMDT 129
Query: 215 VSLTKNGRVVQSDDRFKFTVLDDYIIIF-IKEIRKEDAGDYT 255
L K + F + + G Y
Sbjct: 130 FLLCKERAAHPLLCLRSEHGAQQHQAEFPMSPVTSVHGGTYR 171
Score = 49.1 bits (117), Expect = 3e-06
Identities = 25/162 (15%), Positives = 51/162 (31%), Gaps = 12/162 (7%)
Query: 1708 VVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGD 1767
V+ G +T+ C+ T + R + + +E R +T+ G
Sbjct: 15 VISWGNSVTIWCQGT-LEAREYRLDKEESPAPWDRQNPLEP-KNKARFSIPSMTEDYAGR 72
Query: 1768 YTCEAYNSVGFAHTSSRVKIG-----TPPRIDRMPNALYIPEGDNTKVKIFYAGDQP-ME 1821
Y C + VG++ S +++ + P + +P+ + G + V + P
Sbjct: 73 YRCYYRSPVGWSQPSDPLELVMTGAYSKPTLSALPSP-LVTSGKS--VTLLCQSRSPMDT 129
Query: 1822 VSLTKNGRVVQSDDRFKFTVLDDYIIIF-IKEIRKEDAGDYT 1862
L K + F + + G Y
Sbjct: 130 FLLCKERAAHPLLCLRSEHGAQQHQAEFPMSPVTSVHGGTYR 171
Score = 37.5 bits (87), Expect = 0.026
Identities = 26/130 (20%), Positives = 46/130 (35%), Gaps = 21/130 (16%)
Query: 54 EGNDYEFRIIAV-------------NAIGKSEPSICTTPVKICEFVGGEKPDFIVPLKDL 100
N F I ++ + +G S+PS P+++ G + L
Sbjct: 54 PKNKARFSIPSMTEDYAGRYRCYYRSPVGWSQPS---DPLELVMT-GAYSKPTLSALPSP 109
Query: 101 VVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHF--NEVTDVDN 158
+V GK +TL C+ + +P+ + R E + F + VT V
Sbjct: 110 LVTSGKSVTLLCQ-SRSPMDTFLLCKERAAHPLL-CLRSEHGAQQHQAEFPMSPVTSVHG 167
Query: 159 GDYTCEAYNS 168
G Y C + +
Sbjct: 168 GTYRCFSSHG 177
Score = 37.5 bits (87), Expect = 0.026
Identities = 26/130 (20%), Positives = 46/130 (35%), Gaps = 21/130 (16%)
Query: 1661 EGNDYEFRIIAV-------------NAIGKSEPSICTTPVKICEFVGGEKPDFIVPLKDL 1707
N F I ++ + +G S+PS P+++ G + L
Sbjct: 54 PKNKARFSIPSMTEDYAGRYRCYYRSPVGWSQPS---DPLELVMT-GAYSKPTLSALPSP 109
Query: 1708 VVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHF--NEVTDVDN 1765
+V GK +TL C+ + +P+ + R E + F + VT V
Sbjct: 110 LVTSGKSVTLLCQ-SRSPMDTFLLCKERAAHPLL-CLRSEHGAQQHQAEFPMSPVTSVHG 167
Query: 1766 GDYTCEAYNS 1775
G Y C + +
Sbjct: 168 GTYRCFSSHG 177
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation,
signal transduction, MASS spectrometry, transferase;
2.05A {Rattus norvegicus} SCOP: d.144.1.7
Length = 343
Score = 50.8 bits (122), Expect = 3e-06
Identities = 23/116 (19%), Positives = 43/116 (37%), Gaps = 23/116 (19%)
Query: 802 IYSKYVPQPVDIKTSSVYDHYD-----------ILEEIGTGAFGVVHRCRERKTGNIFAA 850
+ + P P+ + + + + +IG GAFG V + R G +
Sbjct: 18 LLDRLHPNPMYQRMPLLLNPKLLSLEYPRNNIEYVRDIGEGAFGRVFQARAP--GLLPYE 75
Query: 851 KFIPV---------SHNLEKELIRKEIDIMNQLHHPKLINLHDAFEDDDEMVLIFE 897
F V S +++ + R E +M + +P ++ L M L+FE
Sbjct: 76 PFTMVAVKMLKEEASADMQADFQR-EAALMAEFDNPNIVKLLGVCAVGKPMCLLFE 130
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding,
nucleotide serine/threonine-protein kinase, transferase,
signaling Pro; HET: ACP; 1.80A {Dictyostelium
discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Length = 287
Score = 50.4 bits (121), Expect = 3e-06
Identities = 18/71 (25%), Positives = 38/71 (53%), Gaps = 7/71 (9%)
Query: 819 YDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELI-------RKEIDIM 871
+ + ++IG G FG+VH+ R K ++ A K + + + + + ++E+ IM
Sbjct: 18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIM 77
Query: 872 NQLHHPKLINL 882
+ L+HP ++ L
Sbjct: 78 SNLNHPNIVKL 88
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics,
structural genomics consortium, SGC; 1.80A {Toxoplasma
gondii} PDB: 2w1z_A
Length = 377
Score = 50.8 bits (121), Expect = 3e-06
Identities = 11/81 (13%), Positives = 24/81 (29%), Gaps = 6/81 (7%)
Query: 821 HYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELI---RKEIDIMNQL--- 874
+G +++TG F + I ++E+ + L
Sbjct: 74 TLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGI 133
Query: 875 HHPKLINLHDAFEDDDEMVLI 895
+ K +H F ++V
Sbjct: 134 KNQKQAKVHLRFIFPFDLVKD 154
>2dbj_A Proto-oncogene tyrosine-protein kinase MER precursor; C-MER,
receptor tyrosine kinase mertk, FN3 domain, structural
genomics, NPPSFA; NMR {Homo sapiens}
Length = 124
Score = 47.5 bits (113), Expect = 3e-06
Identities = 21/112 (18%), Positives = 34/112 (30%), Gaps = 7/112 (6%)
Query: 358 GMGPPLEGINPIKAKSPYDKPS--PPGIPVVTQVGGDFVNLSWDKP-LDDGGSRIQGYWI 414
G I A + PS P + V D V++ W KP + GY I
Sbjct: 1 GSSGSSG---WILASTTEGAPSVAPLNVTVFLNESSDNVDIRWMKPPTKQQDGELVGYRI 57
Query: 415 DKHEVGSDAWQRVNVAICAP-SQINIPNLIEGRQYEFRVYAQNEAGLSLPSS 465
+ + + + S+ I + R+ A G+ S
Sbjct: 58 SHVWQSAGISKELLEEVGQNGSRARISVQVHNATCTVRIAAVTRGGVGPFSD 109
Score = 47.5 bits (113), Expect = 3e-06
Identities = 21/112 (18%), Positives = 34/112 (30%), Gaps = 7/112 (6%)
Query: 1965 GMGPPLEGINPIKAKSPYDKPS--PPGIPVVTQVGGDFVNLSWDKP-LDDGGSRIQGYWI 2021
G I A + PS P + V D V++ W KP + GY I
Sbjct: 1 GSSGSSG---WILASTTEGAPSVAPLNVTVFLNESSDNVDIRWMKPPTKQQDGELVGYRI 57
Query: 2022 DKHEVGSDAWQRVNVAICAP-SQINIPNLIEGRQYEFRVYAQNEAGLSLPSS 2072
+ + + + S+ I + R+ A G+ S
Sbjct: 58 SHVWQSAGISKELLEEVGQNGSRARISVQVHNATCTVRIAAVTRGGVGPFSD 109
Score = 46.7 bits (111), Expect = 5e-06
Identities = 16/98 (16%), Positives = 32/98 (32%), Gaps = 7/98 (7%)
Query: 1229 DKPS-PPQGPLDVSDITPESCSLSWKPP-LDDGGSPITNYVVEKYESATGFWSKLSSFVR 1286
PS P + + ++ + W P + Y + + G +L V
Sbjct: 16 GAPSVAPLNVTVFLNESSDNVDIRWMKPPTKQQDGELVGYRISHVWQSAGISKELLEEVG 75
Query: 1287 SPA--YDVFGLETNRQYRFRVRAENQYGV---SEPLEL 1319
+ N R+ A + GV S+P+++
Sbjct: 76 QNGSRARISVQVHNATCTVRIAAVTRGGVGPFSDPVKI 113
Score = 44.4 bits (105), Expect = 4e-05
Identities = 14/85 (16%), Positives = 31/85 (36%), Gaps = 8/85 (9%)
Query: 904 PPENLHADEFAG-DSLTLYWTPP---RDNGGSEITNYVVEKKDYNSTVWTKVSSYVTTP- 958
P N+ D++ + W P + +G E+ Y + ++ + ++ V
Sbjct: 21 APLNVTVFLNESSDNVDIRWMKPPTKQQDG--ELVGYRISHVWQSAGISKELLEEVGQNG 78
Query: 959 -FVRVRNLAIGSTYEFRVMAENQYG 982
R+ +T R+ A + G
Sbjct: 79 SRARISVQVHNATCTVRIAAVTRGG 103
Score = 43.3 bits (102), Expect = 9e-05
Identities = 18/133 (13%), Positives = 34/133 (25%), Gaps = 38/133 (28%)
Query: 1000 DVPGAPGAPKGV----DSTEDSISLVWSKP-RHDGGSPIQRYIVEKRLISDDKWIKASMA 1054
P P V + + D++ + W KP + Y + K +
Sbjct: 16 GAPSVA--PLNVTVFLNESSDNVDIRWMKPPTKQQDGELVGYRISHVW-QSAGISKELLE 72
Query: 1055 HIPDTSLKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAA 1114
+ + + + + N R+ AV
Sbjct: 73 EVGQNGSRARI------------------------------SVQVHNATCTVRIAAVTRG 102
Query: 1115 GQGPWSSSSDIIM 1127
G GP+S I +
Sbjct: 103 GVGPFSDPVKIFI 115
Score = 41.3 bits (97), Expect = 4e-04
Identities = 15/91 (16%), Positives = 29/91 (31%), Gaps = 8/91 (8%)
Query: 279 PPIGPLDVSEITKHTCT---LHWNPP--KYDGGLKVTHYVVERRDISMPHW--ICISTTC 331
P + PL+V+ + + W P K G ++ Y + S +
Sbjct: 18 PSVAPLNVTVFLNESSDNVDIRWMKPPTKQQDG-ELVGYRISHVWQSAGISKELLEEVGQ 76
Query: 332 HDTTFIVQGLTEGQEYLFHVMAVNENGMGPP 362
+ + + + AV G+GP
Sbjct: 77 NGSRARISVQVHNATCTVRIAAVTRGGVGPF 107
Score = 41.3 bits (97), Expect = 4e-04
Identities = 15/91 (16%), Positives = 29/91 (31%), Gaps = 8/91 (8%)
Query: 1886 PPIGPLDVSEITKHTCT---LHWNPP--KYDGGLKVTHYVVERRDISMPHW--ICISTTC 1938
P + PL+V+ + + W P K G ++ Y + S +
Sbjct: 18 PSVAPLNVTVFLNESSDNVDIRWMKPPTKQQDG-ELVGYRISHVWQSAGISKELLEEVGQ 76
Query: 1939 HDTTFIVQGLTEGQEYLFHVMAVNENGMGPP 1969
+ + + + AV G+GP
Sbjct: 77 NGSRARISVQVHNATCTVRIAAVTRGGVGPF 107
Score = 38.6 bits (90), Expect = 0.003
Identities = 14/117 (11%), Positives = 27/117 (23%), Gaps = 7/117 (5%)
Query: 656 GMDSAIVKIQ-ISDRPD-PPQFPTVE-DIGHDSLALVWRAPIWDG-GSNITNYIVEKREH 711
S + P P TV + D++ + W P + Y +
Sbjct: 3 SGSSGWILASTTEGAPSVAPLNVTVFLNESSDNVDIRWMKPPTKQQDGELVGYRISHVWQ 62
Query: 712 ---PMSSWIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKDT 765
+ + I+ R+ A G S + +
Sbjct: 63 SAGISKELLEEVGQNGSRARISVQVHNATCTVRIAAVTRGGVGPFSDPVKIFIPAHS 119
>1wj3_A KIAA1496 protein; beta sandwich, PANG, structural genomics, riken
structural genomics/proteomics initiative, RSGI,
neuropeptide; NMR {Homo sapiens} SCOP: b.1.2.1
Length = 117
Score = 47.1 bits (112), Expect = 4e-06
Identities = 20/109 (18%), Positives = 33/109 (30%), Gaps = 8/109 (7%)
Query: 358 GMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDK-PLDDGGSRIQGYWIDK 416
G + + PS P VV V L+W++ + S + GY +
Sbjct: 1 GSSGSSG---TVNVTTKKTPPSQPPGNVVWNATDTKVLLNWEQVKAMENESEVTGYKVFY 57
Query: 417 HEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSS 465
+ Q +N + + L Y V A + G S
Sbjct: 58 RTSSQNNVQVLNT---NKTSAELV-LPIKEDYIIEVKATTDGGDGTSSE 102
Score = 47.1 bits (112), Expect = 4e-06
Identities = 20/109 (18%), Positives = 33/109 (30%), Gaps = 8/109 (7%)
Query: 1965 GMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDK-PLDDGGSRIQGYWIDK 2023
G + + PS P VV V L+W++ + S + GY +
Sbjct: 1 GSSGSSG---TVNVTTKKTPPSQPPGNVVWNATDTKVLLNWEQVKAMENESEVTGYKVFY 57
Query: 2024 HEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSS 2072
+ Q +N + + L Y V A + G S
Sbjct: 58 RTSSQNNVQVLNT---NKTSAELV-LPIKEDYIIEVKATTDGGDGTSSE 102
Score = 46.8 bits (111), Expect = 4e-06
Identities = 25/96 (26%), Positives = 37/96 (38%), Gaps = 6/96 (6%)
Query: 270 TINITGLPGPPIGPLD--VSEITKHTCTLHWNPPK-YDGGLKVTHYVVERRDISMPHWIC 326
T+N+T PP P V T L+W K + +VT Y V R S +
Sbjct: 8 TVNVTTKKTPPSQPPGNVVWNATDTKVLLNWEQVKAMENESEVTGYKVFYRTSSQNNVQV 67
Query: 327 ISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPP 362
++T T L ++Y+ V A + G G
Sbjct: 68 LNTN---KTSAELVLPIKEDYIIEVKATTDGGDGTS 100
Score = 46.8 bits (111), Expect = 4e-06
Identities = 25/96 (26%), Positives = 37/96 (38%), Gaps = 6/96 (6%)
Query: 1877 TINITGLPGPPIGPLD--VSEITKHTCTLHWNPPK-YDGGLKVTHYVVERRDISMPHWIC 1933
T+N+T PP P V T L+W K + +VT Y V R S +
Sbjct: 8 TVNVTTKKTPPSQPPGNVVWNATDTKVLLNWEQVKAMENESEVTGYKVFYRTSSQNNVQV 67
Query: 1934 ISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPP 1969
++T T L ++Y+ V A + G G
Sbjct: 68 LNTN---KTSAELVLPIKEDYIIEVKATTDGGDGTS 100
Score = 44.4 bits (105), Expect = 3e-05
Identities = 24/122 (19%), Positives = 37/122 (30%), Gaps = 11/122 (9%)
Query: 1217 GSDSASCKVYVVDKPSPPQGPLDVS-DITPESCSLSWKP-PLDDGGSPITNYVVEKYESA 1274
S + V K P Q P +V + T L+W+ + S +T Y V S+
Sbjct: 3 SGSSGTVNVTT-KKTPPSQPPGNVVWNATDTKVLLNWEQVKAMENESEVTGYKVFYRTSS 61
Query: 1275 TGFWSKLSSFVRSPAYDVFGLETNRQYRFRVRAENQYGVSEPLELDNSITAKFPFTVPDP 1334
L++ + L Y V+A G S + P
Sbjct: 62 QNNVQVLNT---NKTSAELVLPIKEDYIIEVKATTDGGDGTS-----SEQIRIPRITSSG 113
Query: 1335 PG 1336
P
Sbjct: 114 PS 115
Score = 43.3 bits (102), Expect = 7e-05
Identities = 21/103 (20%), Positives = 31/103 (30%), Gaps = 9/103 (8%)
Query: 904 PPENLHADEFAGDSLTLYWTP-PRDNGGSEITNYVVEKKDYNSTVWTKVSSYVTTPFVRV 962
PP N+ + L W SE+T Y V Y ++ V T
Sbjct: 21 PPGNVVW-NATDTKVLLNWEQVKAMENESEVTGYKVF---YRTSSQNNVQVLNTNKTSAE 76
Query: 963 RNLAIGSTYEFRVMAENQYGLSKPALTIDPIK-AKHPFDVPGA 1004
L I Y V A G + + I+ + P +
Sbjct: 77 LVLPIKEDYIIEVKATTDGGDGTSS---EQIRIPRITSSGPSS 116
Score = 40.6 bits (95), Expect = 7e-04
Identities = 17/132 (12%), Positives = 31/132 (23%), Gaps = 37/132 (28%)
Query: 991 DPIKAKHPFDVPGAPGAPKGVDSTEDSISLVWSK-PRHDGGSPIQRYIVEKRLISDDKWI 1049
+ P P ++T+ + L W + + S + Y
Sbjct: 7 GTVNVTTKKTPPSQPPGNVVWNATDTKVLLNWEQVKAMENESEVTGY------------- 53
Query: 1050 KASMAHIPDTSLKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVC 1109
V + + ++ + EL L +Y V
Sbjct: 54 -------------KVFYRTSSQNNVQVLNTNKTSAEL----------VLPIKEDYIIEVK 90
Query: 1110 AVNAAGQGPWSS 1121
A G G S
Sbjct: 91 ATTDGGDGTSSE 102
Score = 35.2 bits (81), Expect = 0.053
Identities = 17/90 (18%), Positives = 25/90 (27%), Gaps = 7/90 (7%)
Query: 672 PPQFPTVEDIGHDSLALVWRA-PIWDGGSNITNYIVEKREHPMSSWIRVGNTRFTTMAIT 730
PP + L W + S +T Y V R ++ + + T A
Sbjct: 21 PPGNVVWNATDT-KVLLNWEQVKAMENESEVTGYKVFYRTSSQNNVQVLNTNK--TSAEL 77
Query: 731 GLSPGHQYEFRVYAENVYG---RSDPSTTS 757
L Y V A G S+
Sbjct: 78 VLPIKEDYIIEVKATTDGGDGTSSEQIRIP 107
>2dle_A Receptor-type tyrosine-protein phosphatase ETA; protein-tyrosine
phosphatase ETA, R-PTP-ETA, HPTP ETA, protein-tyrosine
phosphatase receptor type J; NMR {Homo sapiens}
Length = 104
Score = 46.6 bits (110), Expect = 4e-06
Identities = 20/88 (22%), Positives = 26/88 (29%), Gaps = 4/88 (4%)
Query: 670 PDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSWIRVGNTRFTTMAI 729
T +I SL L+W+ + SN T Y + SS + V R I
Sbjct: 8 AIQVFDVTAVNISATSLTLIWKVSDNESSSNYT-YKIHVAGETDSSNLNVSEPRAV---I 63
Query: 730 TGLSPGHQYEFRVYAENVYGRSDPSTTS 757
GL Y V P
Sbjct: 64 PGLRSSTFYNITVCPVLGDIEGTPGFLQ 91
Score = 42.8 bits (100), Expect = 8e-05
Identities = 21/106 (19%), Positives = 32/106 (30%), Gaps = 13/106 (12%)
Query: 1231 PSPPQGPLDVSDITPESCSLSWKPPLDDGGSPITNYVVEKYESATGFWSKLSSFVRSPAY 1290
+ +I+ S +L WK ++ S T Y + G + V P
Sbjct: 8 AIQVFD-VTAVNISATSLTLIWKVSDNESSSNYT-YKIH----VAGETDSSNLNVSEPRA 61
Query: 1291 DVFGLETNRQYRFRVRAENQYGVSEPLELDNSITAKFPFTVPDPPG 1336
+ GL ++ Y V P L T P P G
Sbjct: 62 VIPGLRSSTFYNITVCPVLGDIEGTPGFLQVH-------TPPVPSG 100
Score = 36.6 bits (84), Expect = 0.011
Identities = 17/95 (17%), Positives = 23/95 (24%), Gaps = 6/95 (6%)
Query: 373 SPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAIC 432
S + + L W D+ S Y I H G +NV+
Sbjct: 3 SGSSGAIQVFDVTAVNISATSLTLIWKVS-DNESSSNYTYKI--HVAGETDSSNLNVSE- 58
Query: 433 APSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSAS 467
+ IP L Y V P
Sbjct: 59 --PRAVIPGLRSSTFYNITVCPVLGDIEGTPGFLQ 91
Score = 36.6 bits (84), Expect = 0.011
Identities = 17/95 (17%), Positives = 23/95 (24%), Gaps = 6/95 (6%)
Query: 1980 SPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAIC 2039
S + + L W D+ S Y I H G +NV+
Sbjct: 3 SGSSGAIQVFDVTAVNISATSLTLIWKVS-DNESSSNYTYKI--HVAGETDSSNLNVSE- 58
Query: 2040 APSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSAS 2074
+ IP L Y V P
Sbjct: 59 --PRAVIPGLRSSTFYNITVCPVLGDIEGTPGFLQ 91
Score = 36.6 bits (84), Expect = 0.015
Identities = 16/105 (15%), Positives = 29/105 (27%), Gaps = 12/105 (11%)
Query: 279 PPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHDTTFIV 338
+ + I+ + TL W + T Y + + + + ++
Sbjct: 9 IQVFDVTAVNISATSLTLIWKVSDNESSSNYT-YKIHVAGETDS----SNLNVSEPRAVI 63
Query: 339 QGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGI 383
GL Y V V + G P + P P G
Sbjct: 64 PGLRSSTFYNITVCPVLGDIEGTPGF-------LQVHTPPVPSGP 101
Score = 36.6 bits (84), Expect = 0.015
Identities = 16/105 (15%), Positives = 29/105 (27%), Gaps = 12/105 (11%)
Query: 1886 PPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHDTTFIV 1945
+ + I+ + TL W + T Y + + + + ++
Sbjct: 9 IQVFDVTAVNISATSLTLIWKVSDNESSSNYT-YKIHVAGETDS----SNLNVSEPRAVI 63
Query: 1946 QGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGI 1990
GL Y V V + G P + P P G
Sbjct: 64 PGLRSSTFYNITVCPVLGDIEGTPGF-------LQVHTPPVPSGP 101
Score = 36.6 bits (84), Expect = 0.015
Identities = 15/87 (17%), Positives = 24/87 (27%), Gaps = 7/87 (8%)
Query: 902 PHPPENLHADEFAGDSLTLYWTPPRDNGGSEIT-NYVVEKKDYNSTVWTKVSSYVTTPFV 960
++ A + SLTL W + S T V + +S + V
Sbjct: 8 AIQVFDVTAVNISATSLTLIWKVSDNESSSNYTYKIHVAGETDSSNLNVSEPRAV----- 62
Query: 961 RVRNLAIGSTYEFRVMAENQYGLSKPA 987
+ L + Y V P
Sbjct: 63 -IPGLRSSTFYNITVCPVLGDIEGTPG 88
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase,
transferase, serine/threonine-protein kinase; HET: TPO
ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A*
2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A*
3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A
1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Length = 337
Score = 50.3 bits (121), Expect = 4e-06
Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 15/87 (17%)
Query: 820 DHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELI--RKEID-------I 870
+ +D L+ +G G FG V RE+ TG +A K L KE+I + E+ +
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKI------LRKEVIIAKDEVAHTVTESRV 58
Query: 871 MNQLHHPKLINLHDAFEDDDEMVLIFE 897
+ HP L L AF+ D + + E
Sbjct: 59 LQNTRHPFLTALKYAFQTHDRLCFVME 85
>1uc6_A CNTF receptor, ciliary neurotrophic factor receptor alpha;
cytokine, leukemia inhibitory factor, cytokine receptor;
NMR {Homo sapiens} SCOP: b.1.2.1
Length = 109
Score = 46.5 bits (110), Expect = 4e-06
Identities = 19/85 (22%), Positives = 35/85 (41%), Gaps = 6/85 (7%)
Query: 377 KPSPPGIPVVTQVGGD--FVNLSWDKP--LDDGGSRIQGYWIDKHEVGSDAWQRVNVAIC 432
KP PP V V + + ++W P D S +++ + D WQ V +
Sbjct: 7 KPDPPENVVARPVPSNPRRLEVTWQTPSTWPDPESFPLKFFLRYRPLILDQWQHVEL--S 64
Query: 433 APSQINIPNLIEGRQYEFRVYAQNE 457
+ I + G++Y +V A++
Sbjct: 65 NGTAHTITDAYAGKEYIIQVAAKDN 89
Score = 46.5 bits (110), Expect = 4e-06
Identities = 19/85 (22%), Positives = 35/85 (41%), Gaps = 6/85 (7%)
Query: 1984 KPSPPGIPVVTQVGGD--FVNLSWDKP--LDDGGSRIQGYWIDKHEVGSDAWQRVNVAIC 2039
KP PP V V + + ++W P D S +++ + D WQ V +
Sbjct: 7 KPDPPENVVARPVPSNPRRLEVTWQTPSTWPDPESFPLKFFLRYRPLILDQWQHVEL--S 64
Query: 2040 APSQINIPNLIEGRQYEFRVYAQNE 2064
+ I + G++Y +V A++
Sbjct: 65 NGTAHTITDAYAGKEYIIQVAAKDN 89
Score = 46.1 bits (109), Expect = 7e-06
Identities = 17/85 (20%), Positives = 30/85 (35%), Gaps = 5/85 (5%)
Query: 901 RPHPPENLHADEFAGDS--LTLYWTPPR--DNGGSEITNYVVEKKDYNSTVWTKVSSYVT 956
+P PPEN+ A + L + W P + S + + + W V
Sbjct: 7 KPDPPENVVARPVPSNPRRLEVTWQTPSTWPDPESFPLKFFLRYRPLILDQWQHVELSNG 66
Query: 957 TPFVRVRNLAIGSTYEFRVMAENQY 981
T + + G Y +V A++
Sbjct: 67 TAHT-ITDAYAGKEYIIQVAAKDNE 90
Score = 45.4 bits (107), Expect = 1e-05
Identities = 20/92 (21%), Positives = 33/92 (35%), Gaps = 10/92 (10%)
Query: 661 IVKIQISDRPDPPQFPTVEDI--GHDSLALVWRAPI-WDGGSNIT-NYIVEKREHPMSSW 716
VK PDPP+ + L + W+ P W + + + R + W
Sbjct: 5 SVK------PDPPENVVARPVPSNPRRLEVTWQTPSTWPDPESFPLKFFLRYRPLILDQW 58
Query: 717 IRVGNTRFTTMAITGLSPGHQYEFRVYAENVY 748
V + T IT G +Y +V A++
Sbjct: 59 QHVELSNGTAHTITDAYAGKEYIIQVAAKDNE 90
Score = 42.3 bits (99), Expect = 1e-04
Identities = 14/85 (16%), Positives = 28/85 (32%), Gaps = 4/85 (4%)
Query: 1230 KPSPPQGP-LDVSDITPESCSLSWKPP--LDDGGSPITNYVVEKYESATGFWSKLSSFVR 1286
KP PP+ P ++W+ P D S + + W +
Sbjct: 7 KPDPPENVVARPVPSNPRRLEVTWQTPSTWPDPESFPLKFFLRYRPLILDQWQHV-ELSN 65
Query: 1287 SPAYDVFGLETNRQYRFRVRAENQY 1311
A+ + ++Y +V A++
Sbjct: 66 GTAHTITDAYAGKEYIIQVAAKDNE 90
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation,
cancer, PAN inhibitor, ATP-binding nucleotide-binding,
phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo
sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A*
Length = 318
Score = 50.0 bits (120), Expect = 4e-06
Identities = 18/85 (21%), Positives = 28/85 (32%), Gaps = 15/85 (17%)
Query: 824 ILEEIGTGAFGVVHRCRERKTGNIFAAKFIPV---------SHNLEKELIRKEIDIMNQL 874
+ ++G G FG V T + V + EIDI+ L
Sbjct: 35 KIRDLGEGHFGKVSLYCYDPTND---GTGEMVAVKALKADAGPQHRSGWKQ-EIDILRTL 90
Query: 875 HHPKLINLHDAFEDDDE--MVLIFE 897
+H +I ED + L+ E
Sbjct: 91 YHEHIIKYKGCCEDAGAASLQLVME 115
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP
binding, phosphorylation, intracellular,
transferase-transferase inhibitor complex; HET: IAQ;
1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A*
3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A*
3mj1_A* 3mj2_A*
Length = 267
Score = 49.5 bits (119), Expect = 4e-06
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 824 ILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQLHHPKLINLH 883
++EIG+G FG+VH + A K I E++ I E ++M +L HPKL+ L+
Sbjct: 12 FVQEIGSGQFGLVHLGYWLNKDKV-AIKTIREGAMSEEDFIE-EAEVMMKLSHPKLVQLY 69
Query: 884 DAFEDDDEMVLIFE 897
+ + L+ E
Sbjct: 70 GVCLEQAPICLVTE 83
>2edx_A Protein tyrosine phosphatase, receptor type, F; LAR protein,
leukocyte antigen related, structural genomics, NPPSFA;
NMR {Homo sapiens}
Length = 134
Score = 47.0 bits (112), Expect = 5e-06
Identities = 25/120 (20%), Positives = 38/120 (31%), Gaps = 13/120 (10%)
Query: 904 PPENLHADEFAGDSLTLYWTPP---RDNGGSEITNYVV---EKKDYNSTVWTKVSSYVTT 957
PP+ + ++ + W PP NG IT Y V +
Sbjct: 21 PPQKVMCVSMGSTTVRVSWVPPPADSRNG--VITQYSVAYEAVDGEDRGRHVVDGISREH 78
Query: 958 PFVRVRNLAIGSTYEFRVMAENQYGLSKPALTIDPIKAKHPFDVPGAPGAPKGVDSTEDS 1017
+ L + Y V A G + P+ + DVP P P+ V+S S
Sbjct: 79 SSWDLVGLEKWTEYRVWVRAHTDVGPGPES---SPVLVRTDEDVPSGP--PRKVESGPSS 133
Score = 47.0 bits (112), Expect = 5e-06
Identities = 25/112 (22%), Positives = 39/112 (34%), Gaps = 7/112 (6%)
Query: 358 GMGPPLEGINPIKAKSPYDKPS-PPGIPVVTQVGGDFVNLSWDKP-LDDGGSRIQGYWID 415
G I+A++ PS PP + +G V +SW P D I Y +
Sbjct: 1 GSSGSS---GTIEARTAQSTPSAPPQKVMCVSMGSTTVRVSWVPPPADSRNGVITQYSVA 57
Query: 416 KHEVGSDAWQRVNVAICAPSQ--INIPNLIEGRQYEFRVYAQNEAGLSLPSS 465
V + R V + ++ L + +Y V A + G SS
Sbjct: 58 YEAVDGEDRGRHVVDGISREHSSWDLVGLEKWTEYRVWVRAHTDVGPGPESS 109
Score = 47.0 bits (112), Expect = 5e-06
Identities = 25/112 (22%), Positives = 39/112 (34%), Gaps = 7/112 (6%)
Query: 1965 GMGPPLEGINPIKAKSPYDKPS-PPGIPVVTQVGGDFVNLSWDKP-LDDGGSRIQGYWID 2022
G I+A++ PS PP + +G V +SW P D I Y +
Sbjct: 1 GSSGSS---GTIEARTAQSTPSAPPQKVMCVSMGSTTVRVSWVPPPADSRNGVITQYSVA 57
Query: 2023 KHEVGSDAWQRVNVAICAPSQ--INIPNLIEGRQYEFRVYAQNEAGLSLPSS 2072
V + R V + ++ L + +Y V A + G SS
Sbjct: 58 YEAVDGEDRGRHVVDGISREHSSWDLVGLEKWTEYRVWVRAHTDVGPGPESS 109
Score = 47.0 bits (112), Expect = 5e-06
Identities = 24/117 (20%), Positives = 40/117 (34%), Gaps = 9/117 (7%)
Query: 656 GMDSAIVKIQ-ISDRPD-PPQFPTVEDIGHDSLALVWRAPIWDGGSN--ITNYIV----E 707
S ++ + P PPQ +G ++ + W P D N IT Y V
Sbjct: 3 SGSSGTIEARTAQSTPSAPPQKVMCVSMGSTTVRVSWVPPPADS-RNGVITQYSVAYEAV 61
Query: 708 KREHPMSSWIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKD 764
E + + ++ + GL +Y V A G S+ + T +D
Sbjct: 62 DGEDRGRHVVDGISREHSSWDLVGLEKWTEYRVWVRAHTDVGPGPESSPVLVRTDED 118
Score = 46.2 bits (110), Expect = 1e-05
Identities = 34/132 (25%), Positives = 46/132 (34%), Gaps = 21/132 (15%)
Query: 1217 GSDSASCKVYVV-DKPS-PPQGPLDVSDITPESCSLSWKPP-LDDGGSPITNYVVEKYES 1273
S + + PS PPQ + + + +SW PP D IT Y V YE+
Sbjct: 3 SGSSGTIEARTAQSTPSAPPQK-VMCVSMGSTTVRVSWVPPPADSRNGVITQYSV-AYEA 60
Query: 1274 ATGFWSKLSSFVRSPA----YDVFGLETNRQYRFRVRAENQYGV---SEPLELDNSITAK 1326
G +D+ GLE +YR VRA G S P+ +
Sbjct: 61 VDGEDRGRHVVDGISREHSSWDLVGLEKWTEYRVWVRAHTDVGPGPESSPVLV------- 113
Query: 1327 FPFTVPDPPGQP 1338
T D P P
Sbjct: 114 --RTDEDVPSGP 123
Score = 42.7 bits (101), Expect = 2e-04
Identities = 26/110 (23%), Positives = 40/110 (36%), Gaps = 12/110 (10%)
Query: 278 GPPIGPLDVSEITKHTCTLHWNPPKYDG------GLKVTHYVVERRDISMPHWICISTTC 331
PP + + T + W PP D V + V+ D IS
Sbjct: 20 APPQK-VMCVSMGSTTVRVSWVPPPADSRNGVITQYSVAYEAVDGEDRGRHVVDGISRE- 77
Query: 332 HDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPP 381
+++ + GL + EY V A + G GP P+ ++ D PS P
Sbjct: 78 -HSSWDLVGLEKWTEYRVWVRAHTDVGPGPESS---PVLVRTDEDVPSGP 123
Score = 42.7 bits (101), Expect = 2e-04
Identities = 26/110 (23%), Positives = 40/110 (36%), Gaps = 12/110 (10%)
Query: 1885 GPPIGPLDVSEITKHTCTLHWNPPKYDG------GLKVTHYVVERRDISMPHWICISTTC 1938
PP + + T + W PP D V + V+ D IS
Sbjct: 20 APPQK-VMCVSMGSTTVRVSWVPPPADSRNGVITQYSVAYEAVDGEDRGRHVVDGISRE- 77
Query: 1939 HDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPP 1988
+++ + GL + EY V A + G GP P+ ++ D PS P
Sbjct: 78 -HSSWDLVGLEKWTEYRVWVRAHTDVGPGPESS---PVLVRTDEDVPSGP 123
Score = 38.5 bits (90), Expect = 0.004
Identities = 22/138 (15%), Positives = 33/138 (23%), Gaps = 32/138 (23%)
Query: 1000 DVP-GAPGAPKGVDSTEDSISLVWSKP-RHDGGSPIQRYIVEKRLISDDKWIKASMAHIP 1057
P P V ++ + W P I +Y V + + + + I
Sbjct: 16 STPSAPPQKVMCVSMGSTTVRVSWVPPPADSRNGVITQYSVAYEAVDGEDRGRHVVDGIS 75
Query: 1058 DTSLKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQG 1117
+ L L + EY V A G G
Sbjct: 76 REHSSWDL------------------------------VGLEKWTEYRVWVRAHTDVGPG 105
Query: 1118 PWSSSSDIIMCCAPPCAP 1135
P SS + P P
Sbjct: 106 PESSPVLVRTDEDVPSGP 123
>3bn3_B ICAM-5, intercellular adhesion molecule 5, telencephalin; I domain,
integrin, allosteric mobility, cell adhesi immune
system; HET: NAG; 2.10A {Homo sapiens}
Length = 196
Score = 48.5 bits (115), Expect = 5e-06
Identities = 34/210 (16%), Positives = 57/210 (27%), Gaps = 25/210 (11%)
Query: 479 KAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTL 538
+ + R A + + C+ T CP+P L+ T R+ G +
Sbjct: 1 EPFWADLQPRVAFVERGGSLWLNCS-TNCPRPERGGLE-----TSLRRNGT-QRGLRWLA 53
Query: 539 IINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKF----NVPPRFRDTAYFDKGENV 594
+ VC + + P +PP GEN
Sbjct: 54 RQLVDIREPETQPVCFFRCARRTLQARGLIRTFQRPDRVELMPLPPWQP------VGENF 107
Query: 595 VVKIPFTG-YPKPK--ITWYRDNEVIESGGHFHVETSERHAI--LTIRDASNVDTAPYRV 649
+ G P+ +T R + + R A+ T+ A +
Sbjct: 108 TLSCRVPGAGPRASLTLTLLRGAQELIRRSFAGEPPRARGAVLTATVLARREDHGANFSC 167
Query: 650 VAENDLGMDSAIVKIQISDRPDPPQFPTVE 679
AE DL + S P + T
Sbjct: 168 RAELDLRPHGLGLFENSS---APRELRTFS 194
Score = 41.6 bits (97), Expect = 0.001
Identities = 23/164 (14%), Positives = 45/164 (27%), Gaps = 20/164 (12%)
Query: 98 KDLVVPLGKLLTLQCEATGTPVPKC--RWLRNGREISSGARYRVETAGGVFRLHFNEVTD 155
+ V G L L C + G R+ + D
Sbjct: 10 RVAFVERGGSLWLNCSTNCPRPERGGLETSLRRNGTQRGLRWLARQ-----------LVD 58
Query: 156 V--DNGDYTCEAYNSVGFAHTSSRVKIGTPP-RIDRMPNALYIPEGDNTKVKIFYAGDQP 212
+ C + ++ P R++ MP + P G+N + G P
Sbjct: 59 IREPETQPVCFFRCARRTLQARGLIRTFQRPDRVELMPLPPWQPVGENFTLSCRVPGAGP 118
Query: 213 ---MEVSLTKNGRVVQSDDRFKFT-VLDDYIIIFIKEIRKEDAG 252
+ ++L + + + ++ R+ED G
Sbjct: 119 RASLTLTLLRGAQELIRRSFAGEPPRARGAVLTATVLARREDHG 162
Score = 41.6 bits (97), Expect = 0.001
Identities = 23/164 (14%), Positives = 45/164 (27%), Gaps = 20/164 (12%)
Query: 1705 KDLVVPLGKLLTLQCEATGTPVPKC--RWLRNGREISSGARYRVETAGGVFRLHFNEVTD 1762
+ V G L L C + G R+ + D
Sbjct: 10 RVAFVERGGSLWLNCSTNCPRPERGGLETSLRRNGTQRGLRWLARQ-----------LVD 58
Query: 1763 V--DNGDYTCEAYNSVGFAHTSSRVKIGTPP-RIDRMPNALYIPEGDNTKVKIFYAGDQP 1819
+ C + ++ P R++ MP + P G+N + G P
Sbjct: 59 IREPETQPVCFFRCARRTLQARGLIRTFQRPDRVELMPLPPWQPVGENFTLSCRVPGAGP 118
Query: 1820 ---MEVSLTKNGRVVQSDDRFKFT-VLDDYIIIFIKEIRKEDAG 1859
+ ++L + + + ++ R+ED G
Sbjct: 119 RASLTLTLLRGAQELIRRSFAGEPPRARGAVLTATVLARREDHG 162
Score = 37.0 bits (85), Expect = 0.035
Identities = 14/80 (17%), Positives = 26/80 (32%), Gaps = 5/80 (6%)
Query: 2090 IIVPLRNANAIQNHNAQFQCTITGC---PKPTISWLKGSREIT--PSARHHIFAEGDTYT 2144
+ + N C + G T++ L+G++E+ A A G T
Sbjct: 92 VELMPLPPWQPVGENFTLSCRVPGAGPRASLTLTLLRGAQELIRRSFAGEPPRARGAVLT 151
Query: 2145 LIINSVYGVDADEYVCRAVN 2164
+ + + CRA
Sbjct: 152 ATVLARREDHGANFSCRAEL 171
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo
sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A*
3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A*
3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A*
3ad6_A* 3kmm_A* 1qpd_A* ...
Length = 279
Score = 49.5 bits (119), Expect = 5e-06
Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
Query: 824 ILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQLHHPKLINLH 883
++E +G G FG V + A K + + E ++M QL H +L+ L+
Sbjct: 17 LVERLGAGQFGEVWMGYYNGHTKV-AVKSLKQGSMSPDAFL-AEANLMKQLQHQRLVRLY 74
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A;
serine/threonine-protein kinase, minibrain homolog,
nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A
{Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Length = 382
Score = 49.7 bits (119), Expect = 6e-06
Identities = 21/90 (23%), Positives = 40/90 (44%), Gaps = 15/90 (16%)
Query: 820 DHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEK--ELIRKEIDIMNQL--- 874
D Y+I IG G+FG V + +R A K I N + + E+ ++ +
Sbjct: 54 DRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKII---KNKKAFLNQAQIEVRLLELMNKH 110
Query: 875 -----HHPKLINLHDAFEDDDEMVLIFEVL 899
++ +++L F + + L+FE+L
Sbjct: 111 DTEMKYY--IVHLKRHFMFRNHLCLVFEML 138
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion
protein, immunoglobulin fold, I-SET fold, cell adhesion
glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
PDB: 1bqs_A*
Length = 210
Score = 48.4 bits (114), Expect = 7e-06
Identities = 20/150 (13%), Positives = 37/150 (24%), Gaps = 13/150 (8%)
Query: 88 GEKPDFIV--PLKDLVVPLGKLLTLQCEATGT-PVPKCRWLRNGREISSGARYRVETAGG 144
+ V P + V LG L C +W + V++ G
Sbjct: 3 LQVKPLQVEPPEPVVAVALGASRQLTCRLACADRGASVQWRGLDTSLG-----AVQSDTG 57
Query: 145 VFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNT--- 201
L + G C + ++ + P + A + GD
Sbjct: 58 RSVLTVRNASLSAAGTRVCVGSCGGRTFQHTVQLLVYAFPNQLTVSPAA-LVPGDPEVAC 116
Query: 202 KVKIFY-AGDQPMEVSLTKNGRVVQSDDRF 230
+ SL G+ ++
Sbjct: 117 TAHKVTPVDPNALSFSLLVGGQELEGAQAL 146
Score = 48.4 bits (114), Expect = 7e-06
Identities = 20/150 (13%), Positives = 37/150 (24%), Gaps = 13/150 (8%)
Query: 1695 GEKPDFIV--PLKDLVVPLGKLLTLQCEATGT-PVPKCRWLRNGREISSGARYRVETAGG 1751
+ V P + V LG L C +W + V++ G
Sbjct: 3 LQVKPLQVEPPEPVVAVALGASRQLTCRLACADRGASVQWRGLDTSLG-----AVQSDTG 57
Query: 1752 VFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNT--- 1808
L + G C + ++ + P + A + GD
Sbjct: 58 RSVLTVRNASLSAAGTRVCVGSCGGRTFQHTVQLLVYAFPNQLTVSPAA-LVPGDPEVAC 116
Query: 1809 KVKIFY-AGDQPMEVSLTKNGRVVQSDDRF 1837
+ SL G+ ++
Sbjct: 117 TAHKVTPVDPNALSFSLLVGGQELEGAQAL 146
Score = 42.2 bits (98), Expect = 7e-04
Identities = 18/156 (11%), Positives = 38/156 (24%), Gaps = 12/156 (7%)
Query: 479 KAPEIIVPLRNANAIQNHNAQFQCTITGC-PKPTISWLKGSREITPSARHHIFAEGDTYT 537
K ++ P + Q C + ++ W ++ + ++
Sbjct: 6 KPLQVEPPEPVVAVALGASRQLTCRLACADRGASVQWRGLD-----TSLGAVQSDTGRSV 60
Query: 538 LIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENV--- 594
L + + A VC G +L++ P A V
Sbjct: 61 LTVRNASLSAAGTRVCVGSCGGRTFQHTVQLLVYAFPN---QLTVSPAALVPGDPEVACT 117
Query: 595 VVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSER 630
K+ + + +E E E
Sbjct: 118 AHKVTPVDPNALSFSLLVGGQELEGAQALGPEVQEE 153
Score = 40.7 bits (94), Expect = 0.002
Identities = 12/97 (12%), Positives = 28/97 (28%), Gaps = 6/97 (6%)
Query: 2086 KAPEIIVPLRNANAIQNHNAQFQCTITGC-PKPTISWLKGSREITPSARHHIFAEGDTYT 2144
K ++ P + Q C + ++ W ++ + ++
Sbjct: 6 KPLQVEPPEPVVAVALGASRQLTCRLACADRGASVQWRGLD-----TSLGAVQSDTGRSV 60
Query: 2145 LIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAP 2181
L + + A VC G +L++ P
Sbjct: 61 LTVRNASLSAAGTRVCVGSCGGRTFQHTVQLLVYAFP 97
>2ee2_A Contactin-1; neural cell surface protein F3, glycoprotein GP135,
structural genomics, NPPSFA; NMR {Homo sapiens}
Length = 119
Score = 46.2 bits (110), Expect = 7e-06
Identities = 23/110 (20%), Positives = 35/110 (31%), Gaps = 8/110 (7%)
Query: 358 GMGPPLEGINPIKAKSPYDKPS-PPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDK 416
G S D PS P V + +++ W+ L+ ++ Y I
Sbjct: 1 GSSGSSG---VAVINSAQDAPSEAPTEVGVKVLSSSEISVHWEHVLEK---IVESYQIRY 54
Query: 417 HEVGSDAWQRVNVAICAPS-QINIPNLIEGRQYEFRVYAQNEAGLSLPSS 465
V + + + NL+ QY V A N AG PS
Sbjct: 55 WAAHDKEEAANRVQVTSQEYSARLENLLPDTQYFIEVGACNSAGCGPPSD 104
Score = 46.2 bits (110), Expect = 7e-06
Identities = 23/110 (20%), Positives = 35/110 (31%), Gaps = 8/110 (7%)
Query: 1965 GMGPPLEGINPIKAKSPYDKPS-PPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDK 2023
G S D PS P V + +++ W+ L+ ++ Y I
Sbjct: 1 GSSGSSG---VAVINSAQDAPSEAPTEVGVKVLSSSEISVHWEHVLEK---IVESYQIRY 54
Query: 2024 HEVGSDAWQRVNVAICAPS-QINIPNLIEGRQYEFRVYAQNEAGLSLPSS 2072
V + + + NL+ QY V A N AG PS
Sbjct: 55 WAAHDKEEAANRVQVTSQEYSARLENLLPDTQYFIEVGACNSAGCGPPSD 104
Score = 45.8 bits (109), Expect = 9e-06
Identities = 20/114 (17%), Positives = 38/114 (33%), Gaps = 8/114 (7%)
Query: 656 GMDSAIVKIQ-ISDRPD-PPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIV---EKRE 710
S + I D P P V+ + +++ W + + +Y + +
Sbjct: 3 SGSSGVAVINSAQDAPSEAPTEVGVKVLSSSEISVHWEHVLEK---IVESYQIRYWAAHD 59
Query: 711 HPMSSWIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKD 764
++ ++ + + L P QY V A N G PS + T K
Sbjct: 60 KEEAANRVQVTSQEYSARLENLLPDTQYFIEVGACNSAGCGPPSDMIEAFTKKA 113
Score = 42.7 bits (101), Expect = 1e-04
Identities = 12/81 (14%), Positives = 24/81 (29%), Gaps = 5/81 (6%)
Query: 904 PPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVE--KKDYNSTVWTKVSSYVTTPFVR 961
P + + ++++W + +Y + +V R
Sbjct: 21 APTEVGVKVLSSSEISVHWEHVL-EK--IVESYQIRYWAAHDKEEAANRVQVTSQEYSAR 77
Query: 962 VRNLAIGSTYEFRVMAENQYG 982
+ NL + Y V A N G
Sbjct: 78 LENLLPDTQYFIEVGACNSAG 98
Score = 42.0 bits (99), Expect = 2e-04
Identities = 21/124 (16%), Positives = 39/124 (31%), Gaps = 11/124 (8%)
Query: 1217 GSDSASCKVYVV-DKPS-PPQGPLDVSDITPESCSLSWKPPLDDGGSPITNYVVE--KYE 1272
S + D PS P + V ++ S+ W+ L+ + +Y +
Sbjct: 3 SGSSGVAVINSAQDAPSEAPTE-VGVKVLSSSEISVHWEHVLEK---IVESYQIRYWAAH 58
Query: 1273 SATGFWSKLSSFVRSPAYDVFGLETNRQYRFRVRAENQYGVSEPLELDNSITAKFPFTVP 1332
+++ + + + L + QY V A N G P + I A
Sbjct: 59 DKEEAANRVQVTSQEYSARLENLLPDTQYFIEVGACNSAGCGPPSD---MIEAFTKKASG 115
Query: 1333 DPPG 1336
G
Sbjct: 116 PSSG 119
Score = 41.2 bits (97), Expect = 4e-04
Identities = 20/108 (18%), Positives = 35/108 (32%), Gaps = 11/108 (10%)
Query: 278 GPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVV---ERRDISMPHWICISTTCHDT 334
P + V ++ ++HW V Y + D + T +
Sbjct: 20 EAPTE-VGVKVLSSSEISVHWEHVLEK---IVESYQIRYWAAHDKEEAANR-VQVTSQEY 74
Query: 335 TFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPG 382
+ ++ L +Y V A N G GPP + I+A + G
Sbjct: 75 SARLENLLPDTQYFIEVGACNSAGCGPPSD---MIEAFTKKASGPSSG 119
Score = 41.2 bits (97), Expect = 4e-04
Identities = 20/108 (18%), Positives = 35/108 (32%), Gaps = 11/108 (10%)
Query: 1885 GPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVV---ERRDISMPHWICISTTCHDT 1941
P + V ++ ++HW V Y + D + T +
Sbjct: 20 EAPTE-VGVKVLSSSEISVHWEHVLEK---IVESYQIRYWAAHDKEEAANR-VQVTSQEY 74
Query: 1942 TFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPG 1989
+ ++ L +Y V A N G GPP + I+A + G
Sbjct: 75 SARLENLLPDTQYFIEVGACNSAGCGPPSD---MIEAFTKKASGPSSG 119
Score = 36.2 bits (84), Expect = 0.022
Identities = 11/28 (39%), Positives = 17/28 (60%)
Query: 1094 RVTSLIENHEYEFRVCAVNAAGQGPWSS 1121
R+ +L+ + +Y V A N+AG GP S
Sbjct: 77 RLENLLPDTQYFIEVGACNSAGCGPPSD 104
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK
Ser/Thr protein kinase fold, Ser/Thr protein kinase,
TRA; 1.95A {Leishmania major}
Length = 362
Score = 49.6 bits (119), Expect = 8e-06
Identities = 19/113 (16%), Positives = 46/113 (40%), Gaps = 17/113 (15%)
Query: 804 SKYVPQPVDIKTSSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKEL 863
+ + + + ++ Y + I +G++G V + G A K + + + + +
Sbjct: 6 GEAAMRDLIAELHAMQSPYTVQRFISSGSYGAVCAGVDS-EGIPVAIKRVFNTVSDGRTV 64
Query: 864 -----------IRKEIDIMNQLHHPKLINLHDAF-----EDDDEMVLIFEVLD 900
+ +EI ++N HHP ++ L D F ++ L+ E++
Sbjct: 65 NILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMR 117
>3tgx_A Interleukin-21 receptor; class I cytokine, class I cytokine receptor,
sugarbridge, fibronectine domain, signaling,
cytokine-cytokine receptor; HET: MAN FUL NAG BMA FUC;
2.80A {Homo sapiens}
Length = 219
Score = 48.2 bits (114), Expect = 9e-06
Identities = 26/155 (16%), Positives = 52/155 (33%), Gaps = 35/155 (22%)
Query: 1207 SYTIQLVNTVGSDSASCKVYVVD---KPSPPQGPLDVSDITPESCSLSWKPPLDDGGSPI 1263
+++Q+ + G S C +++ KP+PP DV+ +SW+ +D +
Sbjct: 74 IFSVQITDQSGQYSQECGSFLLAESIKPAPPF---DVTVTFSGQYQISWRSDYEDPAFYM 130
Query: 1264 TNYVVEKYE----------SATGFWSKLSSFVRSPAYDVFGLETNRQYRFRVRAENQYGV 1313
++ YE + + +S RS + + Y +VRA G
Sbjct: 131 LKGKLQ-YELQYRNRGDPWAVSPRRKLISVDSRSVSLLPLEFRKDSSYELQVRAGPMPGS 189
Query: 1314 ---------SEPLELDNSITAKFPFTVPDPPGQPQ 1339
S+P+ T + +
Sbjct: 190 SYQGTWSEWSDPVIFQ---------TQSEELKEHH 215
Score = 40.5 bits (94), Expect = 0.003
Identities = 12/114 (10%), Positives = 33/114 (28%), Gaps = 13/114 (11%)
Query: 873 QLHHPKLINLHDAFEDDDEMVLIFEVLD--RPHPPENLHADEFAGDSLTLYWTPPRDNGG 930
+ + D + F + + +P PP ++ + W ++
Sbjct: 70 MADDIFSVQITDQSGQYSQECGSFLLAESIKPAPPFDVTVTF--SGQYQISWRSDYEDPA 127
Query: 931 SEITN----YVVEKKDYNST-----VWTKVSSYVTTPFVRVRNLAIGSTYEFRV 975
+ Y ++ ++ +S + + S+YE +V
Sbjct: 128 FYMLKGKLQYELQYRNRGDPWAVSPRRKLISVDSRSVSLLPLEFRKDSSYELQV 181
Score = 40.1 bits (93), Expect = 0.004
Identities = 23/148 (15%), Positives = 47/148 (31%), Gaps = 22/148 (14%)
Query: 254 YTVNLSNSSGSVS---GTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPP----KYDGG 306
++V +++ SG S G+F + + P PP DV+ + W +
Sbjct: 75 FSVQITDQSGQYSQECGSFLLAESIKPAPP---FDVTVTFSGQYQISWRSDYEDPAFYML 131
Query: 307 LKVTHYVVERRDIS-----MPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGP 361
Y ++ R+ P IS + + + Y V A G
Sbjct: 132 KGKLQYELQYRNRGDPWAVSPRRKLISVDSRSVSLLPLEFRKDSSYELQVRAGPMPGSS- 190
Query: 362 PLEGI-----NPIKAKSPYDKPSPPGIP 384
+G +P+ ++ ++
Sbjct: 191 -YQGTWSEWSDPVIFQTQSEELKEHHHH 217
Score = 40.1 bits (93), Expect = 0.004
Identities = 23/148 (15%), Positives = 47/148 (31%), Gaps = 22/148 (14%)
Query: 1861 YTVNLSNSSGSVS---GTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPP----KYDGG 1913
++V +++ SG S G+F + + P PP DV+ + W +
Sbjct: 75 FSVQITDQSGQYSQECGSFLLAESIKPAPP---FDVTVTFSGQYQISWRSDYEDPAFYML 131
Query: 1914 LKVTHYVVERRDIS-----MPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGP 1968
Y ++ R+ P IS + + + Y V A G
Sbjct: 132 KGKLQYELQYRNRGDPWAVSPRRKLISVDSRSVSLLPLEFRKDSSYELQVRAGPMPGSS- 190
Query: 1969 PLEGI-----NPIKAKSPYDKPSPPGIP 1991
+G +P+ ++ ++
Sbjct: 191 -YQGTWSEWSDPVIFQTQSEELKEHHHH 217
Score = 39.7 bits (92), Expect = 0.005
Identities = 31/193 (16%), Positives = 53/193 (27%), Gaps = 23/193 (11%)
Query: 285 DVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHDTTFIVQGLTEG 344
++ + T TL W + + T + R + H TCH V
Sbjct: 19 EMWNLHPSTLTLTWQDQYEELKDEATSCSLHRSAHNATHATY---TCH---MDVFHFMAD 72
Query: 345 QEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDD 404
+ + + KP+PP VT G +SW +D
Sbjct: 73 DIFSVQIT-DQSGQYSQECGSFLLAE----SIKPAPPFDVTVTFSGQ--YQISWRSDYED 125
Query: 405 GGSRIQGYWIDKHEV----GSDAWQRVNVAICAPSQ-----INIPNLIEGRQYEFRVYAQ 455
+ + ++E+ D W + + YE +V A
Sbjct: 126 PAFYMLKGKL-QYELQYRNRGDPWAVSPRRKLISVDSRSVSLLPLEFRKDSSYELQVRAG 184
Query: 456 NEAGLSLPSSASN 468
G S + S
Sbjct: 185 PMPGSSYQGTWSE 197
Score = 39.7 bits (92), Expect = 0.005
Identities = 31/193 (16%), Positives = 53/193 (27%), Gaps = 23/193 (11%)
Query: 1892 DVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHDTTFIVQGLTEG 1951
++ + T TL W + + T + R + H TCH V
Sbjct: 19 EMWNLHPSTLTLTWQDQYEELKDEATSCSLHRSAHNATHATY---TCH---MDVFHFMAD 72
Query: 1952 QEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDD 2011
+ + + KP+PP VT G +SW +D
Sbjct: 73 DIFSVQIT-DQSGQYSQECGSFLLAE----SIKPAPPFDVTVTFSGQ--YQISWRSDYED 125
Query: 2012 GGSRIQGYWIDKHEV----GSDAWQRVNVAICAPSQ-----INIPNLIEGRQYEFRVYAQ 2062
+ + ++E+ D W + + YE +V A
Sbjct: 126 PAFYMLKGKL-QYELQYRNRGDPWAVSPRRKLISVDSRSVSLLPLEFRKDSSYELQVRAG 184
Query: 2063 NEAGLSLPSSASN 2075
G S + S
Sbjct: 185 PMPGSSYQGTWSE 197
Score = 37.4 bits (86), Expect = 0.028
Identities = 20/124 (16%), Positives = 39/124 (31%), Gaps = 11/124 (8%)
Query: 646 PYRVVAENDLG-MDSAIVKIQISD--RPDPPQFPTVEDIGHDSL--ALVWRAPIWDGGSN 700
+ V + G +++ +P PP TV G + + P +
Sbjct: 74 IFSVQITDQSGQYSQECGSFLLAESIKPAPPFDVTVTFSGQYQISWRSDYEDPAFYMLKG 133
Query: 701 ITNYIVEKREHPMSSWIRV------GNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPS 754
Y ++ R + ++R ++ YE +V A + G S
Sbjct: 134 KLQYELQYRNRGDPWAVSPRRKLISVDSRSVSLLPLEFRKDSSYELQVRAGPMPGSSYQG 193
Query: 755 TTSD 758
T S+
Sbjct: 194 TWSE 197
Score = 30.5 bits (68), Expect = 5.7
Identities = 40/238 (16%), Positives = 64/238 (26%), Gaps = 54/238 (22%)
Query: 909 HADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTKVSSYVTTPFVRVRNLAIG 968
+LTL W + E T+ + + +N+T T F+
Sbjct: 19 EMWNLHPSTLTLTWQDQYEELKDEATSCSLHRSAHNATHATYTCHMDVFHFM-------- 70
Query: 969 STYEFRVMAENQYG-LSKPALTIDPIK-AKHPFDVPGAPGAPKGVDSTEDSISLV----- 1021
+ F V +Q G S+ + + K P P V T +
Sbjct: 71 ADDIFSVQITDQSGQYSQECGSFLLAESIK--------PAPPFDVTVTFSGQYQISWRSD 122
Query: 1022 WSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEGKSIGSERGSTA 1081
+ P +Y ++ R D + I S L E
Sbjct: 123 YEDPAFYMLKGKLQYELQYRNRGDPWAVSPRRKLISVDSRSVSLLPLE------------ 170
Query: 1082 QFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAG---QGPWSSSSDIIMCCAPPCAPK 1136
++ YE +V A G QG WS SD ++ K
Sbjct: 171 ----------------FRKDSSYELQVRAGPMPGSSYQGTWSEWSDPVIFQTQSEELK 212
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase
inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB:
3sxr_A*
Length = 268
Score = 48.3 bits (116), Expect = 1e-05
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Query: 824 ILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQLHHPKLINLH 883
+L+E+G+G FGVV + + ++ A K I E E +E M +L HPKL+ +
Sbjct: 12 LLKELGSGQFGVVKLGKWKGQYDV-AVKMIKEGSMSEDEFF-QEAQTMMKLSHPKLVKFY 69
>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase,
neurotrophic tyrosine kinase, receptor-related NTRKR2;
2.90A {Homo sapiens}
Length = 289
Score = 48.4 bits (116), Expect = 1e-05
Identities = 18/83 (21%), Positives = 30/83 (36%), Gaps = 12/83 (14%)
Query: 824 ILEEIGTGAFGVVHRCRERKTGNIFAAKFIPV---------SHNLEKELIRKEIDIMNQL 874
+EE+G FG V++ G + V L +E E + +L
Sbjct: 13 FMEELGEDRFGKVYKGHLF--GPAPGEQTQAVAIKTLKDKAEGPLREEFRH-EAMLRARL 69
Query: 875 HHPKLINLHDAFEDDDEMVLIFE 897
HP ++ L D + +IF
Sbjct: 70 QHPNVVCLLGVVTKDQPLSMIFS 92
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase,
integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB:
2j0k_A*
Length = 656
Score = 49.5 bits (118), Expect = 1e-05
Identities = 28/150 (18%), Positives = 48/150 (32%), Gaps = 23/150 (15%)
Query: 748 YGRSDPSTTSDLITTKDTFKKQIKKRQYDFDETGKKIRGKADEKVSDYDQYVF-----DI 802
Y R T I ++ K+ VS+ D Y D
Sbjct: 317 YCRLVNGATQSFIIRPQKEGERALPSIPKLANNEKQGVRSHTVSVSETDDYAEIIDEEDT 376
Query: 803 YSKYVPQPVDIKTSSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPV------- 855
Y+ + +I+ + + IG G FG VH+ N + V
Sbjct: 377 YTMPSTRDYEIQRERIE----LGRCIGEGQFGDVHQGIYMSPEN----PAMAVAIKTCKN 428
Query: 856 --SHNLEKELIRKEIDIMNQLHHPKLINLH 883
S ++ ++ ++ E M Q HP ++ L
Sbjct: 429 CTSDSVREKFLQ-EALTMRQFDHPHIVKLI 457
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling
pathways, linear binding motif; HET: ANP; 1.33A {Homo
sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A*
2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X*
2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A*
1pmq_A* ...
Length = 371
Score = 48.9 bits (117), Expect = 1e-05
Identities = 21/91 (23%), Positives = 42/91 (46%), Gaps = 8/91 (8%)
Query: 818 VYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFI--PVSHNLEKELIRKEIDIMNQLH 875
V Y L+ IG+GA G+V + A K + P + + +E+ +M ++
Sbjct: 23 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN 82
Query: 876 HPKLINLHDAF------EDDDEMVLIFEVLD 900
H +I L + F E+ ++ ++ E++D
Sbjct: 83 HKNIIGLLNVFTPQKSLEEFQDVYIVMELMD 113
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily,
immune system; HET: NAG; 3.00A {Homo sapiens} SCOP:
b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Length = 201
Score = 47.3 bits (112), Expect = 1e-05
Identities = 20/168 (11%), Positives = 50/168 (29%), Gaps = 13/168 (7%)
Query: 509 KPTISWLKGSREITPS--ARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGG--VKST 564
K ++ + G I P R + +++I ++ D Y C + K
Sbjct: 37 KMVLTMMSGDMNIWPEYKNRTIFDITNN-LSIVILALRPSDEGTYECVVLKYEKDAFKRE 95
Query: 565 KAELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFH 624
+ ++ P D ++ G+P+P ++W + E + +
Sbjct: 96 HLAEVTLSVKADFPTPSISDFEIPTSNIRRIICSTSGGFPEPHLSWLENGEELNAINTTV 155
Query: 625 VETSER-----HAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQIS 667
+ E + L +N + + + + +
Sbjct: 156 SQDPETELYAVSSKLDFNMTTNHS---FMCLIKYGHLRVNQTFNWNTA 200
Score = 40.4 bits (94), Expect = 0.003
Identities = 23/196 (11%), Positives = 53/196 (27%), Gaps = 24/196 (12%)
Query: 101 VVPLGKLLTLQC--EATGTPVPKCRW-----------LRNGRE-ISSGARYRVE-TAGGV 145
+ ++ TL C + + + R + +G I + R
Sbjct: 5 TKEVKEVATLSCGHNVSVEELAQTRIYWQKEKKMVLTMMSGDMNIWPEYKNRTIFDITNN 64
Query: 146 FRLHFNEVTDVDNGDYTCEAYN-----SVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDN 200
+ + D G Y C + + + + IP +
Sbjct: 65 LSIVILALRPSDEGTYECVVLKYEKDAFKREHLAEVTLSVKADFPTPSISD-FEIPTSNI 123
Query: 201 TKVKIFYAGDQP-MEVSLTKNGRVVQSDDRFKFTVLDD--YIIIFIKEIRKEDAGDYTVN 257
++ +G P +S +NG + + + + Y + + +
Sbjct: 124 RRIICSTSGGFPEPHLSWLENGEELNAINTTVSQDPETELYAVSSKLDFNMTTNHSFMCL 183
Query: 258 LSNSSGSVSGTFTINI 273
+ V+ TF N
Sbjct: 184 IKYGHLRVNQTFNWNT 199
Score = 40.4 bits (94), Expect = 0.003
Identities = 23/196 (11%), Positives = 53/196 (27%), Gaps = 24/196 (12%)
Query: 1708 VVPLGKLLTLQC--EATGTPVPKCRW-----------LRNGRE-ISSGARYRVE-TAGGV 1752
+ ++ TL C + + + R + +G I + R
Sbjct: 5 TKEVKEVATLSCGHNVSVEELAQTRIYWQKEKKMVLTMMSGDMNIWPEYKNRTIFDITNN 64
Query: 1753 FRLHFNEVTDVDNGDYTCEAYN-----SVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDN 1807
+ + D G Y C + + + + IP +
Sbjct: 65 LSIVILALRPSDEGTYECVVLKYEKDAFKREHLAEVTLSVKADFPTPSISD-FEIPTSNI 123
Query: 1808 TKVKIFYAGDQP-MEVSLTKNGRVVQSDDRFKFTVLDD--YIIIFIKEIRKEDAGDYTVN 1864
++ +G P +S +NG + + + + Y + + +
Sbjct: 124 RRIICSTSGGFPEPHLSWLENGEELNAINTTVSQDPETELYAVSSKLDFNMTTNHSFMCL 183
Query: 1865 LSNSSGSVSGTFTINI 1880
+ V+ TF N
Sbjct: 184 IKYGHLRVNQTFNWNT 199
Score = 36.1 bits (83), Expect = 0.077
Identities = 11/68 (16%), Positives = 24/68 (35%), Gaps = 3/68 (4%)
Query: 495 NHNAQFQCTITGC-PKPTISWLKGSREITPSARHHIF-AEGDTYTLIIN-SVYGVDADEY 551
++ + C+ +G P+P +SWL+ E+ E + Y + +
Sbjct: 121 SNIRRIICSTSGGFPEPHLSWLENGEELNAINTTVSQDPETELYAVSSKLDFNMTTNHSF 180
Query: 552 VCRAVNKG 559
+C
Sbjct: 181 MCLIKYGH 188
Score = 36.1 bits (83), Expect = 0.077
Identities = 11/68 (16%), Positives = 24/68 (35%), Gaps = 3/68 (4%)
Query: 2102 NHNAQFQCTITGC-PKPTISWLKGSREITPSARHHIF-AEGDTYTLIIN-SVYGVDADEY 2158
++ + C+ +G P+P +SWL+ E+ E + Y + +
Sbjct: 121 SNIRRIICSTSGGFPEPHLSWLENGEELNAINTTVSQDPETELYAVSSKLDFNMTTNHSF 180
Query: 2159 VCRAVNKG 2166
+C
Sbjct: 181 MCLIKYGH 188
Score = 31.5 bits (71), Expect = 2.5
Identities = 14/93 (15%), Positives = 31/93 (33%), Gaps = 5/93 (5%)
Query: 2116 KPTISWLKGSREITPS--ARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGG--VKST 2171
K ++ + G I P R + +++I ++ D Y C + K
Sbjct: 37 KMVLTMMSGDMNIWPEYKNRTIFDITNN-LSIVILALRPSDEGTYECVVLKYEKDAFKRE 95
Query: 2172 KAELIIMTAPKFNVPPRFRDTAYFESDVVVVVC 2204
+ ++ P D S++ ++C
Sbjct: 96 HLAEVTLSVKADFPTPSISDFEIPTSNIRRIIC 128
Score = 29.6 bits (66), Expect = 9.4
Identities = 18/121 (14%), Positives = 34/121 (28%), Gaps = 22/121 (18%)
Query: 1109 CAVNAAGQGPWSSSSDIIMCCAPPCAPKITSDLSIRDMTVLAGEEFTIT-VPFSGRPKPT 1167
C V + + + + SI D + I G P+P
Sbjct: 82 CVVLKYEKDAFKREHLAEVTLSVKADF---PTPSISDFEIPTSNIRRIICSTSGGFPEPH 138
Query: 1168 PIWTVNGDEVSPDGRIKFETSENQTIYRNKSAKRATDSGSYTIQ---LVNTVGSDSASCK 1224
W NG+E++ N + + ++ Y + N + S C
Sbjct: 139 LSWLENGEELNAI---------------NTTVSQDPETELYAVSSKLDFNMTTNHSFMCL 183
Query: 1225 V 1225
+
Sbjct: 184 I 184
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase;
HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Length = 367
Score = 48.5 bits (116), Expect = 2e-05
Identities = 22/91 (24%), Positives = 40/91 (43%), Gaps = 8/91 (8%)
Query: 818 VYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFI--PVSHNLEKELIRKEIDIMNQLH 875
V Y L+ +G+GA+G V + +TG A K + P L + +E+ ++ +
Sbjct: 23 VRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMR 82
Query: 876 HPKLINLHDAF------EDDDEMVLIFEVLD 900
H +I L D F +D + L+ +
Sbjct: 83 HENVIGLLDVFTPDETLDDFTDFYLVMPFMG 113
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural
genomics, structural genomics consortium, SGC; 1.80A
{Toxoplasma gondii}
Length = 413
Score = 48.5 bits (115), Expect = 2e-05
Identities = 17/119 (14%), Positives = 37/119 (31%), Gaps = 14/119 (11%)
Query: 819 YDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELI---RKEIDIMNQL- 874
+G +++TG F + I ++E+ + L
Sbjct: 77 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLR 136
Query: 875 --HHPKLINLHDAFEDDDEMVLIFEVLDRPHPPE--NLHADEFAGDSLTLYWTPPRDNG 929
+ K +H F + F+++ P + + DE L+ ++ PR
Sbjct: 137 GIKNQKQAKVHLRF------IFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQS 189
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase,
4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3,
2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43;
1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A*
3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A*
1k2p_A
Length = 283
Score = 47.6 bits (114), Expect = 2e-05
Identities = 23/60 (38%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 824 ILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQLHHPKLINLH 883
L+E+GTG FGVV + R ++ A K I E E I E +M L H KL+ L+
Sbjct: 28 FLKELGTGQFGVVKYGKWRGQYDV-AIKMIKEGSMSEDEFIE-EAKVMMNLSHEKLVQLY 85
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB
structural genomics consortium, TBSG fold, FHAA,
transferase; 2.26A {Mycobacterium tuberculosis} PDB:
3oun_B* 3otv_A 3ouk_A
Length = 286
Score = 47.4 bits (113), Expect = 2e-05
Identities = 12/99 (12%), Positives = 26/99 (26%), Gaps = 12/99 (12%)
Query: 820 DHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNL---EKELIRKEIDIMNQLHH 876
Y +L G + + A F+ L + ++++
Sbjct: 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDK 90
Query: 877 PKLINLHDAFEDDDEMVLIFE---------VLDRPHPPE 906
P + + D +++ E V D P
Sbjct: 91 PGVARVLDVVHTRAGGLVVAEWIRGGSLQEVADTSPSPV 129
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet,
C2-SET immunoglobulin superfamily, H-bonded G strand
PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4
b.1.1.4 PDB: 1xmw_A
Length = 186
Score = 46.4 bits (109), Expect = 2e-05
Identities = 32/174 (18%), Positives = 55/174 (31%), Gaps = 18/174 (10%)
Query: 101 VVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGD 160
V G + L C +W +NG+E+ + F+EV D +G
Sbjct: 10 VSISGTSVELTCPLD--SDENLKWEKNGQELPQKHDKHLVLQ------DFSEVED--SGY 59
Query: 161 YTCEAYNSVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKN 220
Y C S + + ++G+ + + D+ G Q +
Sbjct: 60 YVCYTPASNKNTYLYLKARVGSADDAKKDAAKKDDAKKDD----AKKDGSQTNKAKNLVQ 115
Query: 221 GRVVQSDDRFKFT--VLDDYIIIFI--KEIRKEDAGDYTVNLSNSSGSVSGTFT 270
+ D T + D I I +A T NL N++ GT+
Sbjct: 116 VDGSRGDGSVLLTCGLTDKTIKWLKDGSIISPLNATKNTWNLGNNAKDPRGTYQ 169
Score = 46.4 bits (109), Expect = 2e-05
Identities = 32/174 (18%), Positives = 55/174 (31%), Gaps = 18/174 (10%)
Query: 1708 VVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGD 1767
V G + L C +W +NG+E+ + F+EV D +G
Sbjct: 10 VSISGTSVELTCPLD--SDENLKWEKNGQELPQKHDKHLVLQ------DFSEVED--SGY 59
Query: 1768 YTCEAYNSVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKN 1827
Y C S + + ++G+ + + D+ G Q +
Sbjct: 60 YVCYTPASNKNTYLYLKARVGSADDAKKDAAKKDDAKKDD----AKKDGSQTNKAKNLVQ 115
Query: 1828 GRVVQSDDRFKFT--VLDDYIIIFI--KEIRKEDAGDYTVNLSNSSGSVSGTFT 1877
+ D T + D I I +A T NL N++ GT+
Sbjct: 116 VDGSRGDGSVLLTCGLTDKTIKWLKDGSIISPLNATKNTWNLGNNAKDPRGTYQ 169
Score = 42.6 bits (99), Expect = 5e-04
Identities = 11/76 (14%), Positives = 21/76 (27%), Gaps = 10/76 (13%)
Query: 96 PLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTD 155
++ + L C T + +WL++G IS + +
Sbjct: 113 LVQVDGSRGDGSVLLTCGLTDKTI---KWLKDGSIISPLNATKN-------TWNLGNNAK 162
Query: 156 VDNGDYTCEAYNSVGF 171
G Y C+
Sbjct: 163 DPRGTYQCQGAKETSN 178
Score = 42.6 bits (99), Expect = 5e-04
Identities = 11/76 (14%), Positives = 21/76 (27%), Gaps = 10/76 (13%)
Query: 1703 PLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTD 1762
++ + L C T + +WL++G IS + +
Sbjct: 113 LVQVDGSRGDGSVLLTCGLTDKTI---KWLKDGSIISPLNATKN-------TWNLGNNAK 162
Query: 1763 VDNGDYTCEAYNSVGF 1778
G Y C+
Sbjct: 163 DPRGTYQCQGAKETSN 178
Score = 38.7 bits (89), Expect = 0.008
Identities = 15/118 (12%), Positives = 33/118 (27%), Gaps = 12/118 (10%)
Query: 591 GENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSERHAILTIRDASNV-DTAPYRV 649
G +V + P + W ++ + + H L ++D S V D+ Y
Sbjct: 14 GTSVELTCPL--DSDENLKWEKNGQELPQKHDKH---------LVLQDFSEVEDSGYYVC 62
Query: 650 VAENDLGMDSAIVKIQISDRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVE 707
+K ++ D + +D A + + +
Sbjct: 63 YTPASNKNTYLYLKARVGSADDAKKDAAKKDDAKKDDAKKDGSQTNKAKNLVQVDGSR 120
Score = 35.2 bits (80), Expect = 0.14
Identities = 14/121 (11%), Positives = 28/121 (23%), Gaps = 12/121 (9%)
Query: 1149 LAGEEFTITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQTIYRNKSAKRATDSGSY 1208
++G +T P W NG E+ + + DSG Y
Sbjct: 12 ISGTSVELTCPLD--SDENLKWEKNGQELPQK---------HDKHLVLQDFSEVEDSGYY 60
Query: 1209 TIQLVNTVGSDSASCKVYVVDKPSPPQGPLDVSDITPESCSLSWKPPLDDGGSPITNYVV 1268
+ + K V + D + + + + +
Sbjct: 61 VCYTPASNKNTYLYLKARVGSADDAKKDAAKKDDAKKDD-AKKDGSQTNKAKNLVQVDGS 119
Query: 1269 E 1269
Sbjct: 120 R 120
>3v5q_A NT-3 growth factor receptor; kinase domain, kinase,
phosphorylation, transferase-transfer inhibitor complex;
HET: 0F4; 2.20A {Homo sapiens}
Length = 297
Score = 47.6 bits (114), Expect = 2e-05
Identities = 17/82 (20%), Positives = 32/82 (39%), Gaps = 11/82 (13%)
Query: 824 ILEEIGTGAFGVVHRCRERKTGNIFAAKFIPV--------SHNLEKELIRKEIDIMNQLH 875
+ E+G GAFG V + V + K+ R E +++ L
Sbjct: 19 LKRELGEGAFGKVFLAECY--NLSPTKDKMLVAVKALKDPTLAARKDFQR-EAELLTNLQ 75
Query: 876 HPKLINLHDAFEDDDEMVLIFE 897
H ++ + D D ++++FE
Sbjct: 76 HEHIVKFYGVCGDGDPLIMVFE 97
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex,
DOWN-regulated kinase, ordered activation loop; HET: PTR
PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1
d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A*
3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Length = 454
Score = 48.2 bits (115), Expect = 2e-05
Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Query: 824 ILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQLHHPKLINLH 883
+ +++G G FG V K + A K + + + E ++M L H KL+ LH
Sbjct: 192 LEKKLGAGQFGEVWMATYNKHTKV-AVKTMKPGSMSVEAFL-AEANVMKTLQHDKLVKLH 249
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor,
immune system, IG domain, cytotoxicity, C2-type IG-like
domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Length = 188
Score = 46.3 bits (110), Expect = 3e-05
Identities = 19/127 (14%), Positives = 39/127 (30%), Gaps = 9/127 (7%)
Query: 101 VVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGD 160
+VP K +T+ C+ + + G + R + + + ++ G
Sbjct: 14 MVPKEKQVTICCQGN-YGAVEYQLHFEGSLFAVD-RPKPPERINKVKFYIPDMNSRMAGQ 71
Query: 161 YTCEAYNSVGFAHTSS----RVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPME-V 215
Y+C ++ S+ V + + G+ V + D
Sbjct: 72 YSCIYRVGELWSEPSNLLDLVVTEMYDTPTLSVHPGPEVISGEK--VTFYCRLDTATSMF 129
Query: 216 SLTKNGR 222
L K GR
Sbjct: 130 LLLKEGR 136
Score = 46.3 bits (110), Expect = 3e-05
Identities = 19/127 (14%), Positives = 39/127 (30%), Gaps = 9/127 (7%)
Query: 1708 VVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGD 1767
+VP K +T+ C+ + + G + R + + + ++ G
Sbjct: 14 MVPKEKQVTICCQGN-YGAVEYQLHFEGSLFAVD-RPKPPERINKVKFYIPDMNSRMAGQ 71
Query: 1768 YTCEAYNSVGFAHTSS----RVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPME-V 1822
Y+C ++ S+ V + + G+ V + D
Sbjct: 72 YSCIYRVGELWSEPSNLLDLVVTEMYDTPTLSVHPGPEVISGEK--VTFYCRLDTATSMF 129
Query: 1823 SLTKNGR 1829
L K GR
Sbjct: 130 LLLKEGR 136
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain,
transferase-transferase inhibit complex; HET: PTR 0NT;
1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A*
3eyh_A*
Length = 302
Score = 47.7 bits (114), Expect = 3e-05
Identities = 16/69 (23%), Positives = 27/69 (39%), Gaps = 13/69 (18%)
Query: 824 ILEEIGTGAFGVVHRCRERKTGNIFAAKFIPV---------SHNLEKELIRKEIDIMNQL 874
+ ++G G FG V CR G+ V N +L + EI+I+ L
Sbjct: 25 RIRDLGEGHFGKVELCRYDPEGD---NTGEQVAVKSLKPESGGNHIADLKK-EIEILRNL 80
Query: 875 HHPKLINLH 883
+H ++
Sbjct: 81 YHENIVKYK 89
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase,
phosphorylation, SH2, SH3, phosphotyrosine,
proto-oncogene, phosphotransferase; HET: PTR; 1.50A
{Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB:
1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B*
3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A*
3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Length = 452
Score = 48.2 bits (115), Expect = 3e-05
Identities = 15/64 (23%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Query: 820 DHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQLHHPKL 879
+ + ++G G FG V T + A K + + + +E +M +L H KL
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPEAFL-QEAQVMKKLRHEKL 241
Query: 880 INLH 883
+ L+
Sbjct: 242 VQLY 245
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell,
HLA, major histocompatibility complex class I (MHC class
I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Length = 257
Score = 47.3 bits (112), Expect = 3e-05
Identities = 35/218 (16%), Positives = 62/218 (28%), Gaps = 31/218 (14%)
Query: 101 VVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVF--RLHFNEVTDVDN 158
+V + + LQC + R G+ + E GV +
Sbjct: 17 LVKSEETVILQCWSD-VRFQHFLLHREGKFKDTL-HLIGEHHDGVSKANFSIGPMMQDLA 74
Query: 159 GDYTCEAYNSVGFAHTSSR--------VKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGD 210
G Y C + S+ + P + P + G++ V + +
Sbjct: 75 GTYRCYGSVTHSPYQLSAPSDPLDIVITGLYEKPSLSAQPGP-TVLAGES--VTLSCSSR 131
Query: 211 QPME-VSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYT---------VNLSN 260
+ L++ G + V + F G Y SN
Sbjct: 132 SSYDMYHLSREGEAHERRFSAGPKVNGTFQADFPL-GPATHGGTYRCFGSFRDSPYEWSN 190
Query: 261 SSGSVSGTFTINITGLPGPPI-GPLDVSEITKHTCTLH 297
SS + +++TG P P + S T + LH
Sbjct: 191 SSDPL----LVSVTGNPSNSWPSPTEPSSETGNPRHLH 224
Score = 47.3 bits (112), Expect = 3e-05
Identities = 35/218 (16%), Positives = 62/218 (28%), Gaps = 31/218 (14%)
Query: 1708 VVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVF--RLHFNEVTDVDN 1765
+V + + LQC + R G+ + E GV +
Sbjct: 17 LVKSEETVILQCWSD-VRFQHFLLHREGKFKDTL-HLIGEHHDGVSKANFSIGPMMQDLA 74
Query: 1766 GDYTCEAYNSVGFAHTSSR--------VKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGD 1817
G Y C + S+ + P + P + G++ V + +
Sbjct: 75 GTYRCYGSVTHSPYQLSAPSDPLDIVITGLYEKPSLSAQPGP-TVLAGES--VTLSCSSR 131
Query: 1818 QPME-VSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYT---------VNLSN 1867
+ L++ G + V + F G Y SN
Sbjct: 132 SSYDMYHLSREGEAHERRFSAGPKVNGTFQADFPL-GPATHGGTYRCFGSFRDSPYEWSN 190
Query: 1868 SSGSVSGTFTINITGLPGPPI-GPLDVSEITKHTCTLH 1904
SS + +++TG P P + S T + LH
Sbjct: 191 SSDPL----LVSVTGNPSNSWPSPTEPSSETGNPRHLH 224
>1zxq_A ICAM-2, intercellular adhesion molecule-2; immunoglobulin fold,
cell adhesion, glycoprotein, transmembr; HET: NAG; 2.20A
{Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Length = 192
Score = 45.9 bits (108), Expect = 3e-05
Identities = 30/182 (16%), Positives = 57/182 (31%), Gaps = 13/182 (7%)
Query: 479 KAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTL 538
K E+ V + + + C+ T C +P + L+ S + E +
Sbjct: 1 KVFEVHVRPKKLAVEPKGSLEVNCS-TTCNQPEVGGLETS------LNKILLDEQAQWKH 53
Query: 539 IINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVKI 598
+ S C G +S + + + P+ + K + ++
Sbjct: 54 YLVSNIS-HDTVLQCHFTCSGKQESMNSNVSVYQPPRQVILTLQPTLVAVGKSFTIECRV 112
Query: 599 PFTGYPKPKIT--WYRDNEVIESGGHFHVETSERHAILTIRD-ASNVDT-APYRVVAEND 654
P T P +T +R NE + + + A T A D + +A D
Sbjct: 113 P-TVEPLDSLTLFLFRGNETLHYETFGKAAPAPQEATATFNSTADREDGHRNFSCLAVLD 171
Query: 655 LG 656
L
Sbjct: 172 LM 173
Score = 37.0 bits (85), Expect = 0.037
Identities = 18/140 (12%), Positives = 38/140 (27%), Gaps = 12/140 (8%)
Query: 98 KDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVD 157
K L V L + C T P+ L ++ H+
Sbjct: 10 KKLAVEPKGSLEVNCSTTCNQ-PEVGGLETSLN-------KILLDEQAQWKHYLVSNISH 61
Query: 158 NGDYTCEAYNSVGFAHTSSRVKI-GTPPRIDRMPNALYIPEGDNTKVKIFYAGDQP---M 213
+ C S +S V + P ++ + G + ++ +P +
Sbjct: 62 DTVLQCHFTCSGKQESMNSNVSVYQPPRQVILTLQPTLVAVGKSFTIECRVPTVEPLDSL 121
Query: 214 EVSLTKNGRVVQSDDRFKFT 233
+ L + + + K
Sbjct: 122 TLFLFRGNETLHYETFGKAA 141
Score = 37.0 bits (85), Expect = 0.037
Identities = 18/140 (12%), Positives = 38/140 (27%), Gaps = 12/140 (8%)
Query: 1705 KDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVD 1764
K L V L + C T P+ L ++ H+
Sbjct: 10 KKLAVEPKGSLEVNCSTTCNQ-PEVGGLETSLN-------KILLDEQAQWKHYLVSNISH 61
Query: 1765 NGDYTCEAYNSVGFAHTSSRVKI-GTPPRIDRMPNALYIPEGDNTKVKIFYAGDQP---M 1820
+ C S +S V + P ++ + G + ++ +P +
Sbjct: 62 DTVLQCHFTCSGKQESMNSNVSVYQPPRQVILTLQPTLVAVGKSFTIECRVPTVEPLDSL 121
Query: 1821 EVSLTKNGRVVQSDDRFKFT 1840
+ L + + + K
Sbjct: 122 TLFLFRGNETLHYETFGKAA 141
Score = 32.0 bits (72), Expect = 1.3
Identities = 18/119 (15%), Positives = 36/119 (30%), Gaps = 9/119 (7%)
Query: 2086 KAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTL 2145
K E+ V + + + C+ T C +P + L+ S + E +
Sbjct: 1 KVFEVHVRPKKLAVEPKGSLEVNCS-TTCNQPEVGGLET------SLNKILLDEQAQWKH 53
Query: 2146 IINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPRFRDTAYFESDVVVVVC 2204
+ S C G +S + + + P+ V + T + C
Sbjct: 54 YLVSNIS-HDTVLQCHFTCSGKQESMNSNVSVYQPPR-QVILTLQPTLVAVGKSFTIEC 110
Score = 31.7 bits (71), Expect = 1.7
Identities = 10/80 (12%), Positives = 23/80 (28%), Gaps = 5/80 (6%)
Query: 2088 PEIIVPLRNANAIQNHNAQFQCTITGC---PKPTISWLKGSREITPSARHHIFAEGDTYT 2144
++I+ L+ + +C + T+ +G+ + T
Sbjct: 89 RQVILTLQPTLVAVGKSFTIECRVPTVEPLDSLTLFLFRGNETLHYETFGKAAPAPQEAT 148
Query: 2145 LIINSVYGVDAD--EYVCRA 2162
NS + + C A
Sbjct: 149 ATFNSTADREDGHRNFSCLA 168
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces
cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A*
1how_A 2jd5_A
Length = 373
Score = 47.8 bits (114), Expect = 3e-05
Identities = 18/93 (19%), Positives = 37/93 (39%), Gaps = 16/93 (17%)
Query: 822 YDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQLH------ 875
Y ++ ++G G F V ++ A K + + E EI ++ +++
Sbjct: 21 YILVRKLGWGHFSTVWLAKDMVNNTHVAMKIV-RGDKVYTEAAEDEIKLLQRVNDADNTK 79
Query: 876 -----HPKLINLHDAFE----DDDEMVLIFEVL 899
++ L D F + +V++FEVL
Sbjct: 80 EDSMGANHILKLLDHFNHKGPNGVHVVMVFEVL 112
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2;
KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase,
structural genomics consortium; HET: SEP PTR IRB; 2.28A
{Homo sapiens} PDB: 3k2l_A*
Length = 429
Score = 47.8 bits (114), Expect = 3e-05
Identities = 21/88 (23%), Positives = 41/88 (46%), Gaps = 15/88 (17%)
Query: 822 YDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEK--ELIRKEIDIMNQL----- 874
Y++L+ IG G+FG V + + K A K + N ++ +EI I+ L
Sbjct: 99 YEVLKVIGKGSFGQVVKAYDHKVHQHVALKMV---RNEKRFHRQAAEEIRILEHLRKQDK 155
Query: 875 ---HHPKLINLHDAFEDDDEMVLIFEVL 899
+ +I++ + F + + + FE+L
Sbjct: 156 DNTMN--VIHMLENFTFRNHICMTFELL 181
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive,
active, ribosomal S6 kinase, activation, alternative
initiation, ATP-binding; HET: TPO STU; 2.35A {Homo
sapiens} PDB: 3a61_A* 3a60_A*
Length = 327
Score = 47.2 bits (113), Expect = 3e-05
Identities = 23/85 (27%), Positives = 45/85 (52%), Gaps = 7/85 (8%)
Query: 820 DHYDILEEIGTGAFGVVHRCRE---RKTGNIFAAKFIP----VSHNLEKELIRKEIDIMN 872
+ +++L +G G +G V + R+ TG IFA K + V + + + E +I+
Sbjct: 17 ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILE 76
Query: 873 QLHHPKLINLHDAFEDDDEMVLIFE 897
++ HP +++L AF+ ++ LI E
Sbjct: 77 EVKHPFIVDLIYAFQTGGKLYLILE 101
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria,
structural GE structural genomics consortium, SGC,
transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Length = 360
Score = 47.3 bits (113), Expect = 4e-05
Identities = 22/85 (25%), Positives = 40/85 (47%), Gaps = 10/85 (11%)
Query: 822 YDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEK--ELIRKEIDIMNQL----- 874
+ ++ ++G G FG V C+ +A K + N++K + E DI+ ++
Sbjct: 37 FLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVV---RNIKKYTRSAKIEADILKKIQNDDI 93
Query: 875 HHPKLINLHDAFEDDDEMVLIFEVL 899
++ ++ H F D M LIFE L
Sbjct: 94 NNNNIVKYHGKFMYYDHMCLIFEPL 118
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase;
HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7
PDB: 2jed_A*
Length = 345
Score = 47.2 bits (113), Expect = 4e-05
Identities = 18/88 (20%), Positives = 38/88 (43%), Gaps = 16/88 (18%)
Query: 820 DHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELI--RKEID-IM----- 871
+ + + + +G G+FG V +KT FA K L+K+++ +++ M
Sbjct: 17 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKA------LKKDVVLMDDDVECTMVEKRV 70
Query: 872 --NQLHHPKLINLHDAFEDDDEMVLIFE 897
HP L ++ F+ + + + E
Sbjct: 71 LSLAWEHPFLTHMFCTFQTKENLFFVME 98
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor;
HET: V4Z; 2.75A {Homo sapiens}
Length = 329
Score = 47.3 bits (113), Expect = 4e-05
Identities = 19/116 (16%), Positives = 39/116 (33%), Gaps = 22/116 (18%)
Query: 824 ILEEIGTGAFGVVHRCRERKTGNIFAAKFIPV--------SHNLEKELIRKEIDIMNQLH 875
+ E+G GAFG V + + V S + ++ R E +++ L
Sbjct: 45 LKWELGEGAFGKVFLAECH--NLLPEQDKMLVAVKALKEASESARQDFQR-EAELLTMLQ 101
Query: 876 HPKLINLHDAFEDDDEMVLIFEVLD-----------RPHPPENLHADEFAGDSLTL 920
H ++ + ++++FE + P ++ A L L
Sbjct: 102 HQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGL 157
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase,
apoptosis, ATP-binding, cytoplasm, endoplasmic
reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A
{Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Length = 373
Score = 47.3 bits (113), Expect = 4e-05
Identities = 22/88 (25%), Positives = 40/88 (45%), Gaps = 16/88 (18%)
Query: 820 DHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELI--RKEID-------- 869
+ L+ IG G+FG V R + +A K L+K+ I +KE
Sbjct: 38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKV------LQKKAILKKKEEKHIMSERNV 91
Query: 870 IMNQLHHPKLINLHDAFEDDDEMVLIFE 897
++ + HP L+ LH +F+ D++ + +
Sbjct: 92 LLKNVKHPFLVGLHFSFQTADKLYFVLD 119
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase,
transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP:
b.34.2.1 d.93.1.1 d.144.1.7
Length = 535
Score = 47.2 bits (112), Expect = 5e-05
Identities = 15/64 (23%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Query: 820 DHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQLHHPKL 879
+ + ++G G FG V T + A K + + + +E +M +L H KL
Sbjct: 267 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPEAFL-QEAQVMKKLRHEKL 324
Query: 880 INLH 883
+ L+
Sbjct: 325 VQLY 328
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET:
ATP; 3.46A {Homo sapiens}
Length = 319
Score = 46.6 bits (111), Expect = 5e-05
Identities = 18/81 (22%), Positives = 33/81 (40%), Gaps = 5/81 (6%)
Query: 819 YDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKEL--IRKEIDIMNQLHH 876
++ +I E IG G FG V+ R A + I + + E +L ++E+ Q H
Sbjct: 32 FEQLEIGELIGKGRFGQVYHGRWHGE---VAIRLIDIERDNEDQLKAFKREVMAYRQTRH 88
Query: 877 PKLINLHDAFEDDDEMVLIFE 897
++ A + +I
Sbjct: 89 ENVVLFMGACMSPPHLAIITS 109
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase
activator complex; HET: ADN; 2.00A {Homo sapiens}
Length = 307
Score = 46.6 bits (111), Expect = 5e-05
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 819 YDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQLHHPK 878
Y ++ E +G GAFGVV + + R A K I E++ E+ +++++HP
Sbjct: 7 YKEIEVEEVVGRGAFGVVCKAKWR--AKDVAIKQI--ESESERKAFIVELRQLSRVNHPN 62
Query: 879 LINL 882
++ L
Sbjct: 63 IVKL 66
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase,
phosphorylation, staurosporine, transferase; HET: STU;
2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Length = 278
Score = 46.0 bits (110), Expect = 6e-05
Identities = 21/60 (35%), Positives = 26/60 (43%), Gaps = 4/60 (6%)
Query: 824 ILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQLHHPKLINLH 883
+L+ IG G FG V R GN A K I + L E +M QL H L+ L
Sbjct: 25 LLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDATAQAFL--AEASVMTQLRHSNLVQLL 80
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform
1; immunoglobulin-like fold, immune system; 1.85A {Homo
sapiens}
Length = 196
Score = 45.3 bits (107), Expect = 6e-05
Identities = 16/80 (20%), Positives = 34/80 (42%), Gaps = 2/80 (2%)
Query: 101 VVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGD 160
V+ G +T++C+ T + R ++ G + +E R +T+ G
Sbjct: 15 VISRGNSVTIRCQGT-LEAQEYRLVKEGSPEPWDTQNPLEPKNKA-RFSIPSMTEHHAGR 72
Query: 161 YTCEAYNSVGFAHTSSRVKI 180
Y C Y+ G++ S +++
Sbjct: 73 YRCYYYSPAGWSEPSDPLEL 92
Score = 45.3 bits (107), Expect = 6e-05
Identities = 16/80 (20%), Positives = 34/80 (42%), Gaps = 2/80 (2%)
Query: 1708 VVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGD 1767
V+ G +T++C+ T + R ++ G + +E R +T+ G
Sbjct: 15 VISRGNSVTIRCQGT-LEAQEYRLVKEGSPEPWDTQNPLEPKNKA-RFSIPSMTEHHAGR 72
Query: 1768 YTCEAYNSVGFAHTSSRVKI 1787
Y C Y+ G++ S +++
Sbjct: 73 YRCYYYSPAGWSEPSDPLEL 92
Score = 41.0 bits (96), Expect = 0.002
Identities = 25/102 (24%), Positives = 34/102 (33%), Gaps = 7/102 (6%)
Query: 69 GKSEPSICTTPVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNG 128
G SEPS P+++ KP + L VV G+ +TLQC + + G
Sbjct: 82 GWSEPS---DPLELVVTGFYNKP-TLSALPSPVVTSGENVTLQCGSRLRFD-RFILTEEG 136
Query: 129 REISSGARYRVETAGGVFRLHF--NEVTDVDNGDYTCEAYNS 168
S T G F+ F VT C
Sbjct: 137 DHKLSWTLDSQLTPSGQFQALFPVGPVTPSHRWMLRCYGSRR 178
Score = 41.0 bits (96), Expect = 0.002
Identities = 25/102 (24%), Positives = 34/102 (33%), Gaps = 7/102 (6%)
Query: 1676 GKSEPSICTTPVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNG 1735
G SEPS P+++ KP + L VV G+ +TLQC + + G
Sbjct: 82 GWSEPS---DPLELVVTGFYNKP-TLSALPSPVVTSGENVTLQCGSRLRFD-RFILTEEG 136
Query: 1736 REISSGARYRVETAGGVFRLHF--NEVTDVDNGDYTCEAYNS 1775
S T G F+ F VT C
Sbjct: 137 DHKLSWTLDSQLTPSGQFQALFPVGPVTPSHRWMLRCYGSRR 178
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2,
phosphorylation, transferase; HET: STU; 2.50A
{Arabidopsis thaliana} PDB: 3ppz_A*
Length = 309
Score = 46.1 bits (110), Expect = 7e-05
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
Query: 819 YDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKEL--IRKEIDIMNQLHH 876
+ +I E+IG G+FG VHR G+ A K + + + +E+ IM +L H
Sbjct: 36 WCDLNIKEKIGAGSFGTVHRAEWH--GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRH 93
Query: 877 PKLINL 882
P ++
Sbjct: 94 PNIVLF 99
>1ujt_A KIAA1568 protein; fibronectin type III domain, structural genomics,
riken structural genomics/proteomics initiative, RSGI,
unknown function; NMR {Homo sapiens} SCOP: b.1.2.1
Length = 120
Score = 43.3 bits (102), Expect = 7e-05
Identities = 16/94 (17%), Positives = 30/94 (31%), Gaps = 8/94 (8%)
Query: 678 VEDIGHDSLALVWRAPIWDGGSNITNYIVEKRE----HPMSSWIR--VGNTRFTTMAITG 731
+ ++ + W I Y V R+ SSW + +
Sbjct: 24 PVVLTPTTVQVTWTVD--RQPQFIQGYRVMYRQTSGLQATSSWQNLDAKVPTERSAVLVN 81
Query: 732 LSPGHQYEFRVYAENVYGRSDPSTTSDLITTKDT 765
L G YE +V + S + + TT+++
Sbjct: 82 LKKGVTYEIKVRPYFNEFQGMDSESKTVRTTEES 115
Score = 42.6 bits (100), Expect = 1e-04
Identities = 15/85 (17%), Positives = 29/85 (34%), Gaps = 6/85 (7%)
Query: 386 VTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSD----AWQRVNVAICAPSQINIPN 441
+ V ++W IQGY + + +WQ ++ + + N
Sbjct: 24 PVVLTPTTVQVTWTVDRQPQ--FIQGYRVMYRQTSGLQATSSWQNLDAKVPTERSAVLVN 81
Query: 442 LIEGRQYEFRVYAQNEAGLSLPSSA 466
L +G YE +V + S +
Sbjct: 82 LKKGVTYEIKVRPYFNEFQGMDSES 106
Score = 42.6 bits (100), Expect = 1e-04
Identities = 15/85 (17%), Positives = 29/85 (34%), Gaps = 6/85 (7%)
Query: 1993 VTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSD----AWQRVNVAICAPSQINIPN 2048
+ V ++W IQGY + + +WQ ++ + + N
Sbjct: 24 PVVLTPTTVQVTWTVDRQPQ--FIQGYRVMYRQTSGLQATSSWQNLDAKVPTERSAVLVN 81
Query: 2049 LIEGRQYEFRVYAQNEAGLSLPSSA 2073
L +G YE +V + S +
Sbjct: 82 LKKGVTYEIKVRPYFNEFQGMDSES 106
Score = 41.4 bits (97), Expect = 4e-04
Identities = 13/92 (14%), Positives = 26/92 (28%), Gaps = 5/92 (5%)
Query: 275 GLPGPPIGPLDVSEITKHTCTLHWNPPKYDG---GLKVTHYVVERRDISMPHWICIS-TT 330
L + + +T T + W + G +V Y + W +
Sbjct: 13 ELGDVLVRLHNPVVLTPTTVQVTWTVDRQPQFIQGYRV-MYRQTSGLQATSSWQNLDAKV 71
Query: 331 CHDTTFIVQGLTEGQEYLFHVMAVNENGMGPP 362
+ + ++ L +G Y V G
Sbjct: 72 PTERSAVLVNLKKGVTYEIKVRPYFNEFQGMD 103
Score = 41.4 bits (97), Expect = 4e-04
Identities = 13/92 (14%), Positives = 26/92 (28%), Gaps = 5/92 (5%)
Query: 1882 GLPGPPIGPLDVSEITKHTCTLHWNPPKYDG---GLKVTHYVVERRDISMPHWICIS-TT 1937
L + + +T T + W + G +V Y + W +
Sbjct: 13 ELGDVLVRLHNPVVLTPTTVQVTWTVDRQPQFIQGYRV-MYRQTSGLQATSSWQNLDAKV 71
Query: 1938 CHDTTFIVQGLTEGQEYLFHVMAVNENGMGPP 1969
+ + ++ L +G Y V G
Sbjct: 72 PTERSAVLVNLKKGVTYEIKVRPYFNEFQGMD 103
Score = 34.9 bits (80), Expect = 0.068
Identities = 21/115 (18%), Positives = 36/115 (31%), Gaps = 32/115 (27%)
Query: 1008 PKGVDSTEDSISLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWV 1067
P + T ++ + W+ R IQ Y V R S + + W
Sbjct: 24 PVVLTPT--TVQVTWTVDRQPQ--FIQGYRVMYRQTSGLQATSS--------------WQ 65
Query: 1068 SEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQGPWSSS 1122
+ + +ER + + +L + YE +V QG S S
Sbjct: 66 NLDAKVPTERSAV--------------LVNLKKGVTYEIKVRPYFNEFQGMDSES 106
Score = 34.5 bits (79), Expect = 0.085
Identities = 15/86 (17%), Positives = 24/86 (27%), Gaps = 11/86 (12%)
Query: 1238 LDVSDITPESCSLSWKPPLDDGGSPITNYVVE----KYESATGFWSKLSSFVRSPA---Y 1290
+ +TP + ++W I Y V AT W L + P
Sbjct: 22 HNPVVLTPTTVQVTWTVDRQPQ--FIQGYRVMYRQTSGLQATSSWQNLD--AKVPTERSA 77
Query: 1291 DVFGLETNRQYRFRVRAENQYGVSEP 1316
+ L+ Y +VR
Sbjct: 78 VLVNLKKGVTYEIKVRPYFNEFQGMD 103
Score = 34.5 bits (79), Expect = 0.087
Identities = 16/75 (21%), Positives = 25/75 (33%), Gaps = 7/75 (9%)
Query: 917 SLTLYWTPPRDNGGSEITNYVVE----KKDYNSTVWTKVSSYVTTPF-VRVRNLAIGSTY 971
++ + WT R I Y V ++ W + + V T + NL G TY
Sbjct: 31 TVQVTWTVDRQPQ--FIQGYRVMYRQTSGLQATSSWQNLDAKVPTERSAVLVNLKKGVTY 88
Query: 972 EFRVMAENQYGLSKP 986
E +V
Sbjct: 89 EIKVRPYFNEFQGMD 103
Score = 29.9 bits (67), Expect = 3.2
Identities = 14/65 (21%), Positives = 23/65 (35%), Gaps = 7/65 (10%)
Query: 22 YIIERREVGGAI----WLKCNDYNVLECSFSVLNLVEGNDYEFRIIAVNAIGK---SEPS 74
Y + R+ G W + E S ++NL +G YE ++ + SE
Sbjct: 48 YRVMYRQTSGLQATSSWQNLDAKVPTERSAVLVNLKKGVTYEIKVRPYFNEFQGMDSESK 107
Query: 75 ICTTP 79
T
Sbjct: 108 TVRTT 112
Score = 29.1 bits (65), Expect = 6.1
Identities = 9/37 (24%), Positives = 15/37 (40%), Gaps = 3/37 (8%)
Query: 1653 SFSVLNLVEGNDYEFRIIAVNAIGK---SEPSICTTP 1686
S ++NL +G YE ++ + SE T
Sbjct: 76 SAVLVNLKKGVTYEIKVRPYFNEFQGMDSESKTVRTT 112
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding
domain of CD48, immune system; HET: NAG; 2.60A {Rattus
norvegicus}
Length = 180
Score = 44.9 bits (106), Expect = 7e-05
Identities = 22/189 (11%), Positives = 49/189 (25%), Gaps = 31/189 (16%)
Query: 98 KDLVVPLGKLLTLQCEAT------------GTPVPKCRWLRNGREISSGARY--RVETAG 143
++ G +TL T + NG++ + + RV+
Sbjct: 7 PNVNAITGSNVTLTILKHPLASYQRLTWLHTTNQKILEYFPNGKKTVFESVFKDRVDLDK 66
Query: 144 GVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKV 203
L V+ D GDY + +++ + + + E N +
Sbjct: 67 TNGALRIYNVSKEDRGDYYMRMLHE-TEDQWKITMEV-----YEMVSKPMIYWECSNATL 120
Query: 204 KIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSG 263
+E+ L + ++S + + + N
Sbjct: 121 TCEVLEGTDVELKLYQGKEHLRSLRQ-----------KTMSYQWTNLRAPFKCKAVNRVS 169
Query: 264 SVSGTFTIN 272
S +N
Sbjct: 170 QESEMEVVN 178
Score = 44.9 bits (106), Expect = 7e-05
Identities = 22/189 (11%), Positives = 49/189 (25%), Gaps = 31/189 (16%)
Query: 1705 KDLVVPLGKLLTLQCEAT------------GTPVPKCRWLRNGREISSGARY--RVETAG 1750
++ G +TL T + NG++ + + RV+
Sbjct: 7 PNVNAITGSNVTLTILKHPLASYQRLTWLHTTNQKILEYFPNGKKTVFESVFKDRVDLDK 66
Query: 1751 GVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKV 1810
L V+ D GDY + +++ + + + E N +
Sbjct: 67 TNGALRIYNVSKEDRGDYYMRMLHE-TEDQWKITMEV-----YEMVSKPMIYWECSNATL 120
Query: 1811 KIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSG 1870
+E+ L + ++S + + + N
Sbjct: 121 TCEVLEGTDVELKLYQGKEHLRSLRQ-----------KTMSYQWTNLRAPFKCKAVNRVS 169
Query: 1871 SVSGTFTIN 1879
S +N
Sbjct: 170 QESEMEVVN 178
Score = 44.5 bits (105), Expect = 9e-05
Identities = 23/191 (12%), Positives = 53/191 (27%), Gaps = 40/191 (20%)
Query: 491 NAIQNHNAQFQCTITGCPKP-TISWLKGSRE-------------ITPSARHHIFAEGDTY 536
NAI N ++WL + + + + +
Sbjct: 10 NAITGSNVTLTILKHPLASYQRLTWLHTTNQKILEYFPNGKKTVFESVFKDRVDLDKTNG 69
Query: 537 TLIINSVYGVDADEYVCRAVNKGGVKSTKAELII---MTAPKFNVPPRFRDTAYFDKGEN 593
L I +V D +Y R +++ + + + ++ P + N
Sbjct: 70 ALRIYNVSKEDRGDYYMRMLHETEDQWK-ITMEVYEMVSKPMIYW-----------ECSN 117
Query: 594 VVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAPYRVVAEN 653
+ ++ Y+ E + S T+ AP++ A N
Sbjct: 118 ATLTCEVLEGTDVELKLYQGKEHLRSLRQ-----------KTMSYQWTNLRAPFKCKAVN 166
Query: 654 DLGMDSAIVKI 664
+ +S + +
Sbjct: 167 RVSQESEMEVV 177
Score = 41.4 bits (97), Expect = 0.001
Identities = 11/76 (14%), Positives = 20/76 (26%), Gaps = 13/76 (17%)
Query: 108 LTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYN 167
TL CE + + + + S + + + C+A N
Sbjct: 118 ATLTCEVLEGTDVELKLYQGKEHLRSLR-----------QKTMSYQWTNLRAPFKCKAVN 166
Query: 168 SVGFAHTSSRVKIGTP 183
V S + P
Sbjct: 167 RVS--QESEMEVVNCP 180
Score = 41.4 bits (97), Expect = 0.001
Identities = 11/76 (14%), Positives = 20/76 (26%), Gaps = 13/76 (17%)
Query: 1715 LTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYN 1774
TL CE + + + + S + + + C+A N
Sbjct: 118 ATLTCEVLEGTDVELKLYQGKEHLRSLR-----------QKTMSYQWTNLRAPFKCKAVN 166
Query: 1775 SVGFAHTSSRVKIGTP 1790
V S + P
Sbjct: 167 RVS--QESEMEVVNCP 180
Score = 37.6 bits (87), Expect = 0.021
Identities = 19/108 (17%), Positives = 40/108 (37%), Gaps = 5/108 (4%)
Query: 196 PEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFK--FTVLDDYIIIFIKEIRKEDAGD 253
P ++ + +Q + + NG+ + FK + + I + KED GD
Sbjct: 25 PLASYQRLTWLHTTNQKI-LEYFPNGKKTVFESVFKDRVDLDKTNGALRIYNVSKEDRGD 83
Query: 254 YTVNLSNSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPP 301
Y + + + + T+ + + P+ + S T TC +
Sbjct: 84 YYMRMLHETED-QWKITMEVYEMVSKPMIYWECSNATL-TCEVLEGTD 129
Score = 37.6 bits (87), Expect = 0.021
Identities = 19/108 (17%), Positives = 40/108 (37%), Gaps = 5/108 (4%)
Query: 1803 PEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFK--FTVLDDYIIIFIKEIRKEDAGD 1860
P ++ + +Q + + NG+ + FK + + I + KED GD
Sbjct: 25 PLASYQRLTWLHTTNQKI-LEYFPNGKKTVFESVFKDRVDLDKTNGALRIYNVSKEDRGD 83
Query: 1861 YTVNLSNSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPP 1908
Y + + + + T+ + + P+ + S T TC +
Sbjct: 84 YYMRMLHETED-QWKITMEVYEMVSKPMIYWECSNATL-TCEVLEGTD 129
Score = 33.3 bits (76), Expect = 0.54
Identities = 18/133 (13%), Positives = 44/133 (33%), Gaps = 23/133 (17%)
Query: 1140 DLSIRDMTVLAGEEFTITVPFSGRPKPTPI-WTVNGDEVSPDGRIKFETSENQTIYRNKS 1198
D S+ ++ + G T+T+ + W ++ +++ + +T++ +
Sbjct: 3 DQSVPNVNAITGSNVTLTILKHPLASYQRLTWLHTTNQK----ILEYFPNGKKTVFESVF 58
Query: 1199 AKRAT----------------DSGSYTIQLVNTVGSDSASCKVYVVDKPSPPQGPLDVSD 1242
R D G Y ++ + D + V + S P + S+
Sbjct: 59 KDRVDLDKTNGALRIYNVSKEDRGDYYMR-MLHETEDQWKITMEVYEMVSKPMIYWECSN 117
Query: 1243 ITPESCSLSWKPP 1255
T +C +
Sbjct: 118 AT-LTCEVLEGTD 129
Score = 32.2 bits (73), Expect = 1.3
Identities = 9/68 (13%), Positives = 21/68 (30%), Gaps = 11/68 (16%)
Query: 2104 NAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAV 2163
NA C + + +G + + ++ + + C+AV
Sbjct: 117 NATLTCEVLEGTDVELKLYQGKEHLRSLRQ-----------KTMSYQWTNLRAPFKCKAV 165
Query: 2164 NKGGVKST 2171
N+ +S
Sbjct: 166 NRVSQESE 173
Score = 31.0 bits (70), Expect = 2.7
Identities = 10/90 (11%), Positives = 26/90 (28%), Gaps = 13/90 (14%)
Query: 1427 SGVRDITVKAGEDFSIHVPFMAFPQPAAF-WFANDS------IIDDSDTRVHK------Q 1473
V ++ G + ++ + W + + T
Sbjct: 4 QSVPNVNAITGSNVTLTILKHPLASYQRLTWLHTTNQKILEYFPNGKKTVFESVFKDRVD 63
Query: 1474 LTMNSASLVVKNSQRSDGGQYRLQLKNPAG 1503
L + +L + N + D G Y +++ +
Sbjct: 64 LDKTNGALRIYNVSKEDRGDYYMRMLHETE 93
Score = 29.5 bits (66), Expect = 8.1
Identities = 12/88 (13%), Positives = 25/88 (28%), Gaps = 14/88 (15%)
Query: 2098 NAIQNHNAQFQCTITGCPKP-TISWLKGSRE-------------ITPSARHHIFAEGDTY 2143
NAI N ++WL + + + + +
Sbjct: 10 NAITGSNVTLTILKHPLASYQRLTWLHTTNQKILEYFPNGKKTVFESVFKDRVDLDKTNG 69
Query: 2144 TLIINSVYGVDADEYVCRAVNKGGVKST 2171
L I +V D +Y R +++ +
Sbjct: 70 ALRIYNVSKEDRGDYYMRMLHETEDQWK 97
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo
sapiens} PDB: 3a8w_A* 1zrz_A*
Length = 345
Score = 46.1 bits (110), Expect = 8e-05
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 16/88 (18%)
Query: 820 DHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELI--RKEID-------I 870
+D+L IG G++ V R +KT I+A K ++KEL+ ++ID +
Sbjct: 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKV------VKKELVNDDEDIDWVQTEKHV 62
Query: 871 MNQ-LHHPKLINLHDAFEDDDEMVLIFE 897
Q +HP L+ LH F+ + + + E
Sbjct: 63 FEQASNHPFLVGLHSCFQTESRLFFVIE 90
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase
domain, multitargeted small M kinase inhibitor; HET:
ITI; 2.70A {Homo sapiens}
Length = 327
Score = 46.1 bits (110), Expect = 8e-05
Identities = 17/69 (24%), Positives = 29/69 (42%), Gaps = 13/69 (18%)
Query: 824 ILEEIGTGAFGVVHRCRERKTGNIFAAKFIPV---------SHNLEKELIRKEIDIMNQL 874
++ +G+GAFG V++ G IPV S KE++ E +M +
Sbjct: 19 KIKVLGSGAFGTVYKGLWIPEGE---KVKIPVAIKELREATSPKANKEILD-EAYVMASV 74
Query: 875 HHPKLINLH 883
+P + L
Sbjct: 75 DNPHVCRLL 83
>2jtd_A Myomesin-1, skelemin; immunoglobulin domain, muscle protein, thick
filament, immune system, cell adhesion; NMR {Mus
musculus}
Length = 142
Score = 43.8 bits (103), Expect = 8e-05
Identities = 17/88 (19%), Positives = 35/88 (39%), Gaps = 13/88 (14%)
Query: 101 VVPLGKLLTLQCEATG-----------TPVPKCRWLRNGREISSGARYRV--ETAGGVFR 147
VP L ++ G + K ++ N +EI G +Y++ + G+
Sbjct: 38 TVPTKSELAVEILEKGQVRFWMQAEKLSSNAKVSYIFNEKEIFEGPKYKMHIDRNTGIIE 97
Query: 148 LHFNEVTDVDNGDYTCEAYNSVGFAHTS 175
+ ++ D D G YT + + H++
Sbjct: 98 MFMEKLQDEDEGTYTFQIQDGKATGHST 125
Score = 43.8 bits (103), Expect = 8e-05
Identities = 17/88 (19%), Positives = 35/88 (39%), Gaps = 13/88 (14%)
Query: 1708 VVPLGKLLTLQCEATG-----------TPVPKCRWLRNGREISSGARYRV--ETAGGVFR 1754
VP L ++ G + K ++ N +EI G +Y++ + G+
Sbjct: 38 TVPTKSELAVEILEKGQVRFWMQAEKLSSNAKVSYIFNEKEIFEGPKYKMHIDRNTGIIE 97
Query: 1755 LHFNEVTDVDNGDYTCEAYNSVGFAHTS 1782
+ ++ D D G YT + + H++
Sbjct: 98 MFMEKLQDEDEGTYTFQIQDGKATGHST 125
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A
{Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A*
2p4i_A* 3l8p_A* 2wqb_A*
Length = 327
Score = 46.1 bits (110), Expect = 9e-05
Identities = 27/107 (25%), Positives = 43/107 (40%), Gaps = 18/107 (16%)
Query: 803 YSKYVPQPVDIKTSSVYDHYDI--LEEIGTGAFGVVHRCRERKTGNIFAAKFIPV----- 855
+ + D V D DI + IG G FG V + R +K G +
Sbjct: 6 HHHHGKNNPDPTIYPVLDWNDIKFQDVIGEGNFGQVLKARIKKDG-----LRMDAAIKRM 60
Query: 856 ----SHNLEKELIRKEIDIMNQL-HHPKLINLHDAFEDDDEMVLIFE 897
S + ++ E++++ +L HHP +INL A E + L E
Sbjct: 61 KEYASKDDHRDFAG-ELEVLCKLGHHPNIINLLGACEHRGYLYLAIE 106
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding,
transfera phosphorylation, transmembrane,
tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Length = 325
Score = 45.8 bits (109), Expect = 9e-05
Identities = 19/68 (27%), Positives = 26/68 (38%), Gaps = 12/68 (17%)
Query: 824 ILEEIGTGAFGVVHRCRERKTGNIFAAKFIPV--------SHNLEKELIRKEIDIMNQLH 875
I + IG+G G V R R G + +PV ++ E IM Q
Sbjct: 53 IEKIIGSGDSGEVCYGRLRVPGQ----RDVPVAIKALKAGYTERQRRDFLSEASIMGQFD 108
Query: 876 HPKLINLH 883
HP +I L
Sbjct: 109 HPNIIRLE 116
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat,
ATP-binding, cell junction, cell membrane,
integrin-binding protein, membrane, nucleotide- binding;
1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A*
Length = 271
Score = 45.3 bits (108), Expect = 1e-04
Identities = 10/64 (15%), Positives = 24/64 (37%), Gaps = 4/64 (6%)
Query: 819 YDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKEL--IRKEIDIMNQLHH 876
+ + L ++ G + + R + GN K + V ++ +E + H
Sbjct: 9 FKQLNFLTKLNENHSGELWKGRWQ--GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSH 66
Query: 877 PKLI 880
P ++
Sbjct: 67 PNVL 70
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity,
atypical PKC, trans transferase substrate complex; HET:
TPO ADE; 2.40A {Mus musculus}
Length = 396
Score = 45.8 bits (109), Expect = 1e-04
Identities = 24/88 (27%), Positives = 43/88 (48%), Gaps = 16/88 (18%)
Query: 820 DHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELI--RKEID-------I 870
+D+L IG G++ V R +KT I+A + ++KEL+ ++ID +
Sbjct: 52 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRV------VKKELVNDDEDIDWVQTEKHV 105
Query: 871 MNQ-LHHPKLINLHDAFEDDDEMVLIFE 897
Q +HP L+ LH F+ + + + E
Sbjct: 106 FEQASNHPFLVGLHSCFQTESRLFFVIE 133
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system;
3.00A {Homo sapiens}
Length = 193
Score = 44.2 bits (104), Expect = 1e-04
Identities = 27/192 (14%), Positives = 51/192 (26%), Gaps = 28/192 (14%)
Query: 491 NAIQNHNAQFQCTITGCPKPT-ISWLKGSREI---------------TPSARHHIFAEGD 534
N I + K I+WL + T +
Sbjct: 9 NGILGESVTLPLEFPAGEKVNFITWLFNETSLAFIVPHETKSPEIHVTNPKQGKRLNFTQ 68
Query: 535 TYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENV 594
+Y+L ++++ D Y + K K + L I+ + N+ + + +
Sbjct: 69 SYSLQLSNLKMEDTGSYRAQISTKTSAKLSSYTLRILRQLR-NIQVTNHSQLFQNMTCEL 127
Query: 595 VVK-IPFTGYPKPKITWYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAPYRVVAEN 653
+ W + S + V R + Y +AEN
Sbjct: 128 HLTCSVEDADDNVSFRWEALGNTLSSQPNLTVSWDPRIS----------SEQDYTCIAEN 177
Query: 654 DLGMDSAIVKIQ 665
+ S V Q
Sbjct: 178 AVSNLSFSVSAQ 189
Score = 42.3 bits (99), Expect = 5e-04
Identities = 27/194 (13%), Positives = 58/194 (29%), Gaps = 29/194 (14%)
Query: 98 KDLVVPLGKLLTLQCEAT-GTPVPKCRWLRNGREI---------------SSGARYRVET 141
+ LG+ +TL E G V WL N + ++ + +
Sbjct: 6 LMVNGILGESVTLPLEFPAGEKVNFITWLFNETSLAFIVPHETKSPEIHVTNPKQGKRLN 65
Query: 142 AGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNT 201
+ L + + D G Y + +S ++I R ++ N + +
Sbjct: 66 FTQSYSLQLSNLKMEDTGSYRAQISTKTSAKLSSYTLRILRQLRNIQVTNHSQLFQNMTC 125
Query: 202 KVKIF---YAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNL 258
++ + D + G + S + + R DYT
Sbjct: 126 ELHLTCSVEDADDNVSFRWEALGNTLSSQPN----------LTVSWDPRISSEQDYTCIA 175
Query: 259 SNSSGSVSGTFTIN 272
N+ ++S + +
Sbjct: 176 ENAVSNLSFSVSAQ 189
Score = 42.3 bits (99), Expect = 5e-04
Identities = 27/194 (13%), Positives = 58/194 (29%), Gaps = 29/194 (14%)
Query: 1705 KDLVVPLGKLLTLQCEAT-GTPVPKCRWLRNGREI---------------SSGARYRVET 1748
+ LG+ +TL E G V WL N + ++ + +
Sbjct: 6 LMVNGILGESVTLPLEFPAGEKVNFITWLFNETSLAFIVPHETKSPEIHVTNPKQGKRLN 65
Query: 1749 AGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNT 1808
+ L + + D G Y + +S ++I R ++ N + +
Sbjct: 66 FTQSYSLQLSNLKMEDTGSYRAQISTKTSAKLSSYTLRILRQLRNIQVTNHSQLFQNMTC 125
Query: 1809 KVKIF---YAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNL 1865
++ + D + G + S + + R DYT
Sbjct: 126 ELHLTCSVEDADDNVSFRWEALGNTLSSQPN----------LTVSWDPRISSEQDYTCIA 175
Query: 1866 SNSSGSVSGTFTIN 1879
N+ ++S + +
Sbjct: 176 ENAVSNLSFSVSAQ 189
Score = 40.4 bits (94), Expect = 0.003
Identities = 18/101 (17%), Positives = 27/101 (26%), Gaps = 12/101 (11%)
Query: 71 SEPSICTTPVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEAT-GTPVPKCRWLRNGR 129
++ S + + + L + L L C RW G
Sbjct: 91 TKTSAKLSSYTLRILRQLRNIQ-VTNHSQLFQNMTCELHLTCSVEDADDNVSFRWEALGN 149
Query: 130 EISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVG 170
+SS V + DYTC A N+V
Sbjct: 150 TLSSQPNLTV----------SWDPRISSEQDYTCIAENAVS 180
Score = 40.4 bits (94), Expect = 0.003
Identities = 18/101 (17%), Positives = 27/101 (26%), Gaps = 12/101 (11%)
Query: 1678 SEPSICTTPVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEAT-GTPVPKCRWLRNGR 1736
++ S + + + L + L L C RW G
Sbjct: 91 TKTSAKLSSYTLRILRQLRNIQ-VTNHSQLFQNMTCELHLTCSVEDADDNVSFRWEALGN 149
Query: 1737 EISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVG 1777
+SS V + DYTC A N+V
Sbjct: 150 TLSSQPNLTV----------SWDPRISSEQDYTCIAENAVS 180
Score = 35.3 bits (81), Expect = 0.11
Identities = 16/124 (12%), Positives = 33/124 (26%), Gaps = 16/124 (12%)
Query: 2098 NAIQNHNAQFQCTITGCPKPT-ISWLKGSREI---------------TPSARHHIFAEGD 2141
N I + K I+WL + T +
Sbjct: 9 NGILGESVTLPLEFPAGEKVNFITWLFNETSLAFIVPHETKSPEIHVTNPKQGKRLNFTQ 68
Query: 2142 TYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPRFRDTAYFESDVVV 2201
+Y+L ++++ D Y + K K + L I+ + + +
Sbjct: 69 SYSLQLSNLKMEDTGSYRAQISTKTSAKLSSYTLRILRQLRNIQVTNHSQLFQNMTCELH 128
Query: 2202 VVCV 2205
+ C
Sbjct: 129 LTCS 132
Score = 34.2 bits (78), Expect = 0.28
Identities = 14/83 (16%), Positives = 29/83 (34%), Gaps = 3/83 (3%)
Query: 218 TKNGRVVQSDDRFK--FTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITG 275
TK+ + ++ + Y + + ++ ED G Y +S + + ++T+ I
Sbjct: 48 TKSPEIHVTNPKQGKRLNFTQSYSLQ-LSNLKMEDTGSYRAQISTKTSAKLSSYTLRILR 106
Query: 276 LPGPPIGPLDVSEITKHTCTLHW 298
TC LH
Sbjct: 107 QLRNIQVTNHSQLFQNMTCELHL 129
Score = 34.2 bits (78), Expect = 0.28
Identities = 14/83 (16%), Positives = 29/83 (34%), Gaps = 3/83 (3%)
Query: 1825 TKNGRVVQSDDRFK--FTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITG 1882
TK+ + ++ + Y + + ++ ED G Y +S + + ++T+ I
Sbjct: 48 TKSPEIHVTNPKQGKRLNFTQSYSLQ-LSNLKMEDTGSYRAQISTKTSAKLSSYTLRILR 106
Query: 1883 LPGPPIGPLDVSEITKHTCTLHW 1905
TC LH
Sbjct: 107 QLRNIQVTNHSQLFQNMTCELHL 129
Score = 32.7 bits (74), Expect = 1.0
Identities = 20/133 (15%), Positives = 38/133 (28%), Gaps = 15/133 (11%)
Query: 1455 FWFANDSIIDDSDTRVHKQLTM-NSASLVVKNSQRSDGGQYRLQLKNPAGFDTATLHSRL 1513
I ++ + K+L S SL + N + D G YR Q+ ++ L
Sbjct: 45 PHETKSPEIHVTNPKQGKRLNFTQSYSLQLSNLKMEDTGSYRAQISTKTSAKLSSYT--L 102
Query: 1514 RTLPDSVNPRCHLPSSTSKERPK------FPTHPNHQPWLKWARASLTSKGVDSTEDS-I 1566
R L N + S + + +W + G + +
Sbjct: 103 RILRQLRNIQVTNHSQLFQNMTCELHLTCSVEDADDNVSFRW-----EALGNTLSSQPNL 157
Query: 1567 SLVWSKPRHDGGS 1579
++ W
Sbjct: 158 TVSWDPRISSEQD 170
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage
kinase, MLK family, MLK1 and MLK3 subtype selective
inhibitors; HET: VIN; 2.60A {Homo sapiens}
Length = 271
Score = 45.0 bits (107), Expect = 1e-04
Identities = 20/87 (22%), Positives = 32/87 (36%), Gaps = 6/87 (6%)
Query: 819 YDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELI----RKEIDIMNQL 874
+ + E IG G FG V+R G+ A K + + R+E + L
Sbjct: 6 FAELTLEEIIGIGGFGKVYRAFWI--GDEVAVKAARHDPDEDISQTIENVRQEAKLFAML 63
Query: 875 HHPKLINLHDAFEDDDEMVLIFEVLDR 901
HP +I L + + L+ E
Sbjct: 64 KHPNIIALRGVCLKEPNLCLVMEFARG 90
>3d85_D IL-12B, interleukin-12 subunit P40, cytotoxic lymphocyte; FAB,
immune system/cytokine complex; 1.90A {Homo sapiens}
SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 3d87_B* 3duh_A*
1f42_A* 1f45_A* 3hmx_A* 3qwr_A*
Length = 306
Score = 45.5 bits (106), Expect = 1e-04
Identities = 43/308 (13%), Positives = 81/308 (26%), Gaps = 56/308 (18%)
Query: 484 IVPLRNANAIQNHNAQFQCTITGCPKPTISWLK-GSREITPSARHHIFAEGDTYTLIINS 542
+V L C + I+W S E+ S + TL I
Sbjct: 10 VVELDWYPDAPGEMVVLTCD--TPEEDGITWTLDQSSEVLGSGK----------TLTIQV 57
Query: 543 VYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTG 602
DA +Y C G + L+++ + + + ++
Sbjct: 58 KEFGDAGQYTCHK----GGEVLSHSLLLLHKKEDGIWSTDILKDQKEPKNKTFLRCEAKN 113
Query: 603 YPKPKITWYRDNE------------------------VIESGGHFHVETSERHAILTIRD 638
Y W+ S + E + ++
Sbjct: 114 YSGRFTCWWLTTISTDLTFSVKSSRGSSDPQGVTCGAATLSAERVRGDNKEYEYSVECQE 173
Query: 639 ASNVDTA------PYRVVAENDLGMDSAIVKIQISD--RPDPPQFPTVEDI-GHDSLALV 689
S A V A + L + I D +PDPP+ ++ + + +
Sbjct: 174 DSACPAAEESLPIEVMVDAVHKLKYEQYTSSFFIRDIIKPDPPKNLQLKPLKNSRQVEVS 233
Query: 690 WRAPI-WDGGSNITN--YIVEKREHPMSSWIRVGNTRFTTMAITGLSPGHQYEFRVYAEN 746
W P W + + + V+ + T T+ + V A++
Sbjct: 234 WEYPDTWSTPHSYFSLTFCVQVQGKSKREKKDRVFTDKTS---ATVICRKNASISVRAQD 290
Query: 747 VYGRSDPS 754
Y S S
Sbjct: 291 RYYSSSWS 298
Score = 42.4 bits (98), Expect = 0.001
Identities = 33/225 (14%), Positives = 69/225 (30%), Gaps = 10/225 (4%)
Query: 1096 TSLIENHEYEFRVCAVNAAGQGPWSSSSDIIMCCAPPCAPKITSDLSIRDMTVLAGEEFT 1155
SL+ H+ E + + + + + C A + + T T L
Sbjct: 77 HSLLLLHKKEDGIWSTDILKDQKEPKNKTFLRCEAKNYSGRFTCWWLTTISTDLTFS-VK 135
Query: 1156 ITVPFSGRPKPTPIWTVNGDEVSPDGRIKFETSENQTIYRNKSAKRATDSGSYTIQLVNT 1215
+ S T E ++E S A + + V+
Sbjct: 136 SSRGSSDPQGVTCGAATLSAERVRGDNKEYEYSVECQEDSACPAAEESLPIEVMVDAVHK 195
Query: 1216 VGSDSASCKVYVVD--KPSPPQGPLDVSDITPESCSLSWKPPLDDGGSPITNYVVE---K 1270
+ + + ++ D KP PP+ +SW+ P D +P + + + +
Sbjct: 196 LKYEQYTSSFFIRDIIKPDPPKNLQLKPLKNSRQVEVSWEYP-DTWSTPHSYFSLTFCVQ 254
Query: 1271 YESATGFWSKLSSFVRSPAYDVFGLETNRQYRFRVRAENQYGVSE 1315
+ + K F + + + VRA+++Y S
Sbjct: 255 VQGKSKREKKDRVFTDKTSAT---VICRKNASISVRAQDRYYSSS 296
Score = 42.0 bits (97), Expect = 0.002
Identities = 36/307 (11%), Positives = 66/307 (21%), Gaps = 49/307 (15%)
Query: 89 EKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRL 148
+K ++V L G+++ L C+ W + G+ L
Sbjct: 5 KKDVYVVELDWYPDAPGEMVVLTCD--TPEEDGITWTLDQSSEVLGSG---------KTL 53
Query: 149 HFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMPNALYIPEGD--------- 199
D G YTC V K + P+
Sbjct: 54 TIQVKEFGDAGQYTCHKGGEVLSHSLLLLHKKEDGIWSTDILKDQKEPKNKTFLRCEAKN 113
Query: 200 -----------------NTKVKIFYAGDQPMEVSLTK---NGRVVQSDDRFKFTVLDDYI 239
VK P V+ + V+ D++ ++
Sbjct: 114 YSGRFTCWWLTTISTDLTFSVKSSRGSSDPQGVTCGAATLSAERVRGDNKEYEYSVECQE 173
Query: 240 IIFIKEIRKEDAGDYTVNLSNSSGSVS--GTFTINITGLPGPPIGPLDVSEITKHTCTLH 297
+ + V+ + +F I P PP +
Sbjct: 174 DSACPAAEESLPIEVMVDAVHKLKYEQYTSSFFIRDIIKPDPPKNLQLKPLKNSRQVEVS 233
Query: 298 WNPPK---YDGGLKVTHYVVERRDISMPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAV 354
W P + V+ + S T + + V A
Sbjct: 234 WEYPDTWSTPHSYFSLTFCVQVQGKSKREK----KDRVFTDKTSATVICRKNASISVRAQ 289
Query: 355 NENGMGP 361
+
Sbjct: 290 DRYYSSS 296
Score = 42.0 bits (97), Expect = 0.002
Identities = 36/307 (11%), Positives = 66/307 (21%), Gaps = 49/307 (15%)
Query: 1696 EKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRL 1755
+K ++V L G+++ L C+ W + G+ L
Sbjct: 5 KKDVYVVELDWYPDAPGEMVVLTCD--TPEEDGITWTLDQSSEVLGSG---------KTL 53
Query: 1756 HFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMPNALYIPEGD--------- 1806
D G YTC V K + P+
Sbjct: 54 TIQVKEFGDAGQYTCHKGGEVLSHSLLLLHKKEDGIWSTDILKDQKEPKNKTFLRCEAKN 113
Query: 1807 -----------------NTKVKIFYAGDQPMEVSLTK---NGRVVQSDDRFKFTVLDDYI 1846
VK P V+ + V+ D++ ++
Sbjct: 114 YSGRFTCWWLTTISTDLTFSVKSSRGSSDPQGVTCGAATLSAERVRGDNKEYEYSVECQE 173
Query: 1847 IIFIKEIRKEDAGDYTVNLSNSSGSVS--GTFTINITGLPGPPIGPLDVSEITKHTCTLH 1904
+ + V+ + +F I P PP +
Sbjct: 174 DSACPAAEESLPIEVMVDAVHKLKYEQYTSSFFIRDIIKPDPPKNLQLKPLKNSRQVEVS 233
Query: 1905 WNPPK---YDGGLKVTHYVVERRDISMPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAV 1961
W P + V+ + S T + + V A
Sbjct: 234 WEYPDTWSTPHSYFSLTFCVQVQGKSKREK----KDRVFTDKTSATVICRKNASISVRAQ 289
Query: 1962 NENGMGP 1968
+
Sbjct: 290 DRYYSSS 296
Score = 40.1 bits (92), Expect = 0.006
Identities = 38/285 (13%), Positives = 69/285 (24%), Gaps = 45/285 (15%)
Query: 209 GDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGT 268
+ ++ T + VL + I+ DAG YT + S S
Sbjct: 30 TPEEDGITWTLDQSSE---------VLGSGKTLTIQVKEFGDAGQYTCHKGGEVLSHSLL 80
Query: 269 FT------------INITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVER 316
+ P ++ T W
Sbjct: 81 LLHKKEDGIWSTDILKDQKEPKNKTFLRCEAKNYSGRFTCWWLTTISTDLTFSVKSSRGS 140
Query: 317 RD---ISMPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKS 373
D ++ + + E QE A + ++ ++ +K +
Sbjct: 141 SDPQGVTCGAATLSAERVRGDNKEYEYSVECQEDSACPAAEESLPIEVMVDAVHKLKYEQ 200
Query: 374 P--------YDKPSPPGIPVVTQV-GGDFVNLSWDKPLDDGGSRIQGYWIDKHEV----- 419
KP PP + + V +SW+ P D S Y+ V
Sbjct: 201 YTSSFFIRDIIKPDPPKNLQLKPLKNSRQVEVSWEYP--DTWSTPHSYFSLTFCVQVQGK 258
Query: 420 GSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPS 464
+ + +I + V AQ+ S S
Sbjct: 259 SKREKKDRV-----FTDKTSATVICRKNASISVRAQDRYYSSSWS 298
Score = 40.1 bits (92), Expect = 0.006
Identities = 38/285 (13%), Positives = 69/285 (24%), Gaps = 45/285 (15%)
Query: 1816 GDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGT 1875
+ ++ T + VL + I+ DAG YT + S S
Sbjct: 30 TPEEDGITWTLDQSSE---------VLGSGKTLTIQVKEFGDAGQYTCHKGGEVLSHSLL 80
Query: 1876 FT------------INITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVER 1923
+ P ++ T W
Sbjct: 81 LLHKKEDGIWSTDILKDQKEPKNKTFLRCEAKNYSGRFTCWWLTTISTDLTFSVKSSRGS 140
Query: 1924 RD---ISMPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKS 1980
D ++ + + E QE A + ++ ++ +K +
Sbjct: 141 SDPQGVTCGAATLSAERVRGDNKEYEYSVECQEDSACPAAEESLPIEVMVDAVHKLKYEQ 200
Query: 1981 P--------YDKPSPPGIPVVTQV-GGDFVNLSWDKPLDDGGSRIQGYWIDKHEV----- 2026
KP PP + + V +SW+ P D S Y+ V
Sbjct: 201 YTSSFFIRDIIKPDPPKNLQLKPLKNSRQVEVSWEYP--DTWSTPHSYFSLTFCVQVQGK 258
Query: 2027 GSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPS 2071
+ + +I + V AQ+ S S
Sbjct: 259 SKREKKDRV-----FTDKTSATVICRKNASISVRAQDRYYSSSWS 298
Score = 35.9 bits (81), Expect = 0.14
Identities = 14/99 (14%), Positives = 28/99 (28%), Gaps = 8/99 (8%)
Query: 890 DEMVLIFEVLDRPHPPENLHADEFAG-DSLTLYWTPPR--DNGGSEIT-NYVVEKKDYNS 945
+ +P PP+NL + + W P S + + V+ + +
Sbjct: 201 YTSSFFIRDIIKPDPPKNLQLKPLKNSRQVEVSWEYPDTWSTPHSYFSLTFCVQVQGKSK 260
Query: 946 TVWTKVSSYVTTPFVRVRNLAIGSTYEFRVMAENQYGLS 984
T + V A+++Y S
Sbjct: 261 REKKDRVFTDKT----SATVICRKNASISVRAQDRYYSS 295
Score = 31.6 bits (70), Expect = 3.2
Identities = 6/32 (18%), Positives = 10/32 (31%)
Query: 1089 MFIPNRVTSLIENHEYEFRVCAVNAAGQGPWS 1120
+F ++I V A + WS
Sbjct: 267 VFTDKTSATVICRKNASISVRAQDRYYSSSWS 298
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive
kinase, HER3, ATP-binding, cell membrane, membrane,
nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB:
3lmg_A*
Length = 325
Score = 45.4 bits (108), Expect = 1e-04
Identities = 12/67 (17%), Positives = 25/67 (37%), Gaps = 9/67 (13%)
Query: 824 ILEEIGTGAFGVVHRCR---ERKTGNIFAA----KFIPVSHNLEKELIRKEIDIMNQLHH 876
L+ +G+G FG VH+ E ++ I + + + + + L H
Sbjct: 17 KLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVT--DHMLAIGSLDH 74
Query: 877 PKLINLH 883
++ L
Sbjct: 75 AHIVRLL 81
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase,
transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB:
3iw4_A*
Length = 353
Score = 45.3 bits (108), Expect = 2e-04
Identities = 18/88 (20%), Positives = 37/88 (42%), Gaps = 16/88 (18%)
Query: 820 DHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELI--RKEID-------I 870
++ L +G G+FG V + T ++A K L+K+++ +++ +
Sbjct: 20 TDFNFLMVLGKGSFGKVMLSERKGTDELYAVKI------LKKDVVIQDDDVECTMVEKRV 73
Query: 871 MNQ-LHHPKLINLHDAFEDDDEMVLIFE 897
+ P L LH F+ D + + E
Sbjct: 74 LALPGKPPFLTQLHSCFQTMDRLYFVME 101
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase;
2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A*
1u54_A* 3eqr_A* 3eqp_B*
Length = 291
Score = 44.9 bits (107), Expect = 2e-04
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 6/66 (9%)
Query: 824 ILEEIGTGAFGVVHR--CRERKTGNIFAA----KFIPVSHNLEKELIRKEIDIMNQLHHP 877
+LE++G G+FGVV R + A K +S + +E++ M+ L H
Sbjct: 22 LLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHR 81
Query: 878 KLINLH 883
LI L+
Sbjct: 82 NLIRLY 87
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase,
phosphorylation, serine/threonine protein kinase; 1.8A
{Homo sapiens} SCOP: d.144.1.7
Length = 355
Score = 45.4 bits (108), Expect = 2e-04
Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 820 DHYDILEEIGTGAFGVVHRCRE---RKTGNIFAAKFIP----VSHNLEKELIRKEIDIMN 872
+++++L+ +GTGA+G V R+ TG ++A K + V E R E ++
Sbjct: 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLE 113
Query: 873 QL-HHPKLINLHDAFEDDDEMVLIFE 897
+ P L+ LH AF+ + ++ LI +
Sbjct: 114 HIRQSPFLVTLHYAFQTETKLHLILD 139
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting
of N- and C-lobes, transferase; 2.40A {Homo sapiens}
SCOP: d.144.1.7 PDB: 1xr0_A
Length = 370
Score = 45.0 bits (107), Expect = 2e-04
Identities = 17/84 (20%), Positives = 32/84 (38%), Gaps = 11/84 (13%)
Query: 824 ILEEIGTGAFGVVHRCRERKTGNIFAAKFIPV---------SHNLEKELIRKEIDIMNQL 874
+ + +G G FG V + + V + +L+ E+++M +
Sbjct: 85 LGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVS-EMEMMKMI 143
Query: 875 -HHPKLINLHDAFEDDDEMVLIFE 897
H +INL A D + +I E
Sbjct: 144 GKHKNIINLLGACTQDGPLYVIVE 167
>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of
P90 ribosomal S6 kinase 2, ATP- binding,
nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus
musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A*
Length = 325
Score = 44.8 bits (107), Expect = 2e-04
Identities = 19/83 (22%), Positives = 46/83 (55%), Gaps = 5/83 (6%)
Query: 820 DHYDILEEIGTGAFGVVHRCRE---RKTGNIFAAKFIPVSHNLEKELI--RKEIDIMNQL 874
+++L+ +G G+FG V ++ ++A K + + ++ + + E DI+ ++
Sbjct: 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 83
Query: 875 HHPKLINLHDAFEDDDEMVLIFE 897
+HP ++ LH AF+ + ++ LI +
Sbjct: 84 NHPFIVKLHYAFQTEGKLYLILD 106
>1oww_A FN, fibronectin first type III module, CIG; fibronectin type III
module, structural protein; NMR {Homo sapiens} SCOP:
b.1.2.1
Length = 98
Score = 41.3 bits (96), Expect = 2e-04
Identities = 20/96 (20%), Positives = 41/96 (42%), Gaps = 4/96 (4%)
Query: 1231 PSPPQGPLDVSDITPESCSLSWKPPLDDGGSPITNYVVE-KYESATGFWSKLSSFVRSPA 1289
P + + + P S + W P S I+ Y++ + +++ G W + + +
Sbjct: 6 SGPVEVFITETPSQPNSHPIQWNAP---QPSHISKYILRWRPKNSVGRWKEATIPGHLNS 62
Query: 1290 YDVFGLETNRQYRFRVRAENQYGVSEPLELDNSITA 1325
Y + GL+ Y ++ + QYG E D + T+
Sbjct: 63 YTIKGLKPGVVYEGQLISIQQYGHQEVTRFDFTTTS 98
Score = 40.9 bits (95), Expect = 4e-04
Identities = 23/95 (24%), Positives = 39/95 (41%), Gaps = 8/95 (8%)
Query: 672 PPQFPTVEDIGH--DSLALVWRAPIWDGGSNITNYIVE-KREHPMSSWIRVG-NTRFTTM 727
P + + +S + W AP S+I+ YI+ + ++ + W +
Sbjct: 7 GPVEVFITETPSQPNSHPIQWNAP---QPSHISKYILRWRPKNSVGRWKEATIPGHLNSY 63
Query: 728 AITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITT 762
I GL PG YE ++ + YG + T D TT
Sbjct: 64 TIKGLKPGVVYEGQLISIQQYGHQE-VTRFDFTTT 97
Score = 37.1 bits (85), Expect = 0.008
Identities = 16/68 (23%), Positives = 31/68 (45%), Gaps = 4/68 (5%)
Query: 916 DSLTLYWTPPRDNGGSEITNYVVEKKDYNS-TVWTKVSSYVTTPFVRVRNLAIGSTYEFR 974
+S + W P+ S I+ Y++ + NS W + + ++ L G YE +
Sbjct: 21 NSHPIQWNAPQ---PSHISKYILRWRPKNSVGRWKEATIPGHLNSYTIKGLKPGVVYEGQ 77
Query: 975 VMAENQYG 982
+++ QYG
Sbjct: 78 LISIQQYG 85
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET;
nucleotide-binding, hirschsprung disease,
phosphorylation, disease mutation; HET: ACK; 2.00A {Homo
sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A*
2ivv_A*
Length = 314
Score = 44.5 bits (106), Expect = 2e-04
Identities = 20/83 (24%), Positives = 38/83 (45%), Gaps = 12/83 (14%)
Query: 824 ILEEIGTGAFGVVHRCRERKTGNIFAAKFIPV---------SHNLEKELIRKEIDIMNQL 874
+ + +G G FG V + A + V S + ++L+ E +++ Q+
Sbjct: 27 LGKTLGEGEFGKVVKAT--AFHLKGRAGYTTVAVKMLKENASPSELRDLLS-EFNVLKQV 83
Query: 875 HHPKLINLHDAFEDDDEMVLIFE 897
+HP +I L+ A D ++LI E
Sbjct: 84 NHPHVIKLYGACSQDGPLLLIVE 106
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting
of N- and C-lobes, transferase; HET: PTR ACP; 1.80A
{Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A*
2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A*
3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A*
3js2_A* 3ky2_A ...
Length = 334
Score = 44.6 bits (106), Expect = 3e-04
Identities = 18/84 (21%), Positives = 33/84 (39%), Gaps = 11/84 (13%)
Query: 824 ILEEIGTGAFGVVHRCRERKTGNIFAAKFIPV---------SHNLEKELIRKEIDIMNQL 874
+ + +G GAFG V + + V + +L+ E+++M +
Sbjct: 39 LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVS-EMEMMKMI 97
Query: 875 -HHPKLINLHDAFEDDDEMVLIFE 897
H +INL A D + +I E
Sbjct: 98 GKHKNIINLLGACTQDGPLYVIVE 121
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase,
CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo
sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A*
2wb8_A
Length = 336
Score = 44.5 bits (104), Expect = 3e-04
Identities = 27/146 (18%), Positives = 43/146 (29%), Gaps = 25/146 (17%)
Query: 820 DHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPV--------SHNLEKELIRKEIDIM 871
+ E+IG G FG V + A K I + SH E I EI I
Sbjct: 20 EKLQRCEKIGEGVFGEVFQT--IADHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIIS 77
Query: 872 NQLH---------HPKLINLHDAF----EDDDEMVLIFEVLDRPHPPENLHADEFAGDSL 918
+L I L+ ++ ++ + N D F D L
Sbjct: 78 KELSLLSGEVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQL 137
Query: 919 TLYWTPPRDNGGSEITNYVVEKKDYN 944
+ + GG ++ +
Sbjct: 138 FIVLEF--EFGGIDLEQMRTKLSSLA 161
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A
{Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A*
1ow0_C*
Length = 218
Score = 43.3 bits (102), Expect = 3e-04
Identities = 25/191 (13%), Positives = 52/191 (27%), Gaps = 17/191 (8%)
Query: 101 VVPLGKLLTLQCEAT-GTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNG 159
V+PL + +QC+A + + ++N G R + + + G
Sbjct: 19 VIPLDGSVKIQCQAIREAYLTQLMIIKNSTYREIGRRLKFWN-ETDPEFVIDHMDANKAG 77
Query: 160 DYTCEAYNSVGFAHTSSRVKI-----GTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPME 214
Y C+ S +++ P + + G+N + A
Sbjct: 78 RYQCQYRIGHYRFRYSDTLELVVTGLYGKPFLSADRGL-VLMPGENISLTCSSAHIPFDR 136
Query: 215 VSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSV-----SGTF 269
SL K G + + + + +G Y + S
Sbjct: 137 FSLAKEGE----LSLPQHQSGEHPANFSLGPVDLNVSGIYRCYGWYNRSPYLWSFPSNAL 192
Query: 270 TINITGLPGPP 280
+ +T
Sbjct: 193 ELVVTDSIHQD 203
Score = 43.3 bits (102), Expect = 3e-04
Identities = 25/191 (13%), Positives = 52/191 (27%), Gaps = 17/191 (8%)
Query: 1708 VVPLGKLLTLQCEAT-GTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNG 1766
V+PL + +QC+A + + ++N G R + + + G
Sbjct: 19 VIPLDGSVKIQCQAIREAYLTQLMIIKNSTYREIGRRLKFWN-ETDPEFVIDHMDANKAG 77
Query: 1767 DYTCEAYNSVGFAHTSSRVKI-----GTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPME 1821
Y C+ S +++ P + + G+N + A
Sbjct: 78 RYQCQYRIGHYRFRYSDTLELVVTGLYGKPFLSADRGL-VLMPGENISLTCSSAHIPFDR 136
Query: 1822 VSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSV-----SGTF 1876
SL K G + + + + +G Y + S
Sbjct: 137 FSLAKEGE----LSLPQHQSGEHPANFSLGPVDLNVSGIYRCYGWYNRSPYLWSFPSNAL 192
Query: 1877 TINITGLPGPP 1887
+ +T
Sbjct: 193 ELVVTDSIHQD 203
Score = 40.2 bits (94), Expect = 0.003
Identities = 15/100 (15%), Positives = 35/100 (35%), Gaps = 8/100 (8%)
Query: 69 GKSEPSICTTPVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNG 128
+ S +++ KP F+ + LV+ G+ ++L C + P + + G
Sbjct: 88 YRFRYS---DTLELVVTGLYGKP-FLSADRGLVLMPGENISLTCSSAHIPFDRFSLAKEG 143
Query: 129 REISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNS 168
+ + ++ V +G Y C + +
Sbjct: 144 E----LSLPQHQSGEHPANFSLGPVDLNVSGIYRCYGWYN 179
Score = 40.2 bits (94), Expect = 0.003
Identities = 15/100 (15%), Positives = 35/100 (35%), Gaps = 8/100 (8%)
Query: 1676 GKSEPSICTTPVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNG 1735
+ S +++ KP F+ + LV+ G+ ++L C + P + + G
Sbjct: 88 YRFRYS---DTLELVVTGLYGKP-FLSADRGLVLMPGENISLTCSSAHIPFDRFSLAKEG 143
Query: 1736 REISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNS 1775
+ + ++ V +G Y C + +
Sbjct: 144 E----LSLPQHQSGEHPANFSLGPVDLNVSGIYRCYGWYN 179
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK,
signal transduction, SH2, SH3, SRC homology, tyrosine
kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1
d.93.1.1 d.144.1.7 PDB: 1jeg_A
Length = 450
Score = 44.6 bits (106), Expect = 3e-04
Identities = 21/60 (35%), Positives = 26/60 (43%), Gaps = 4/60 (6%)
Query: 824 ILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQLHHPKLINLH 883
+L+ IG G FG V R GN A K I + L E +M QL H L+ L
Sbjct: 197 LLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDATAQAFL--AEASVMTQLRHSNLVQLL 252
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase,
transferase-transferase inhibito; HET: TPO 07U; 2.05A
{Homo sapiens}
Length = 353
Score = 44.5 bits (106), Expect = 3e-04
Identities = 21/88 (23%), Positives = 43/88 (48%), Gaps = 16/88 (18%)
Query: 820 DHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELI--RKEID-------- 869
D+++ + +G G+FG V R ++TG+++A K L+K++I +++
Sbjct: 23 DNFEFIRVLGKGSFGKVMLARVKETGDLYAVKV------LKKDVILQDDDVECTMTEKRI 76
Query: 870 IMNQLHHPKLINLHDAFEDDDEMVLIFE 897
+ +HP L L F+ D + + E
Sbjct: 77 LSLARNHPFLTQLFCCFQTPDRLFFVME 104
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation,
transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus}
PDB: 1tbn_A 1tbo_A 2e73_A
Length = 674
Score = 45.0 bits (106), Expect = 3e-04
Identities = 18/88 (20%), Positives = 37/88 (42%), Gaps = 16/88 (18%)
Query: 820 DHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELI--RKEID-------I 870
++ L +G G+FG V + T ++A K L+K+++ +++ +
Sbjct: 341 TDFNFLMVLGKGSFGKVMLSERKGTDELYAVKI------LKKDVVIQDDDVECTMVEKRV 394
Query: 871 MNQ-LHHPKLINLHDAFEDDDEMVLIFE 897
+ P L LH F+ D + + E
Sbjct: 395 LALPGKPPFLTQLHSCFQTMDRLYFVME 422
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET:
ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A*
2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A*
2jko_A* 2jkk_A*
Length = 281
Score = 43.8 bits (104), Expect = 4e-04
Identities = 16/69 (23%), Positives = 27/69 (39%), Gaps = 14/69 (20%)
Query: 824 ILEEIGTGAFGVVHRCRERKTGNIFAAKFIPV---------SHNLEKELIRKEIDIMNQL 874
+ IG G FG VH+ N + V S ++ ++ ++ E M Q
Sbjct: 19 LGRCIGEGQFGDVHQGIYMSPEN----PALAVAIKTCKNCTSDSVREKFLQ-EALTMRQF 73
Query: 875 HHPKLINLH 883
HP ++ L
Sbjct: 74 DHPHIVKLI 82
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease
mutation, glycoprotein, nucleot binding,
phosphorylation, receptor; HET: ADP; 1.90A {Homo
sapiens} PDB: 3bpr_A* 2p0c_A*
Length = 313
Score = 43.8 bits (104), Expect = 4e-04
Identities = 14/64 (21%), Positives = 27/64 (42%), Gaps = 5/64 (7%)
Query: 824 ILEEIGTGAFGVVHRCRERKTGNIF---AAKFIPVSHNLEKELIR--KEIDIMNQLHHPK 878
+ + +G G FG V ++ A K + + ++ ++E+ E M HP
Sbjct: 38 LGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPN 97
Query: 879 LINL 882
+I L
Sbjct: 98 VIRL 101
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase,
transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A*
3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A*
3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A*
2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A*
Length = 289
Score = 43.4 bits (103), Expect = 4e-04
Identities = 12/61 (19%), Positives = 30/61 (49%), Gaps = 5/61 (8%)
Query: 824 ILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELI--RKEIDIMNQLHHPKLIN 881
+ + IG+G+FG V++ + A K + V+ ++L + E+ ++ + H ++
Sbjct: 28 VGQRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 84
Query: 882 L 882
Sbjct: 85 F 85
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase,
splicing, human, 10Z-hymendialdisine, structural
genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Length = 339
Score = 43.8 bits (104), Expect = 5e-04
Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 16/89 (17%)
Query: 822 YDILEEIGTGAFGVVHRCRERKTGNIFAA-KFIPVSHNLEK--ELIRKEIDIMNQL---- 874
Y+I++ +G GAFG V C + K G A K + N+++ E R EI ++ L
Sbjct: 16 YEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIV---KNVDRYCEAARSEIQVLEHLNTTD 72
Query: 875 ----HHPKLINLHDAFEDDDEMVLIFEVL 899
+ + + FE + ++FE+L
Sbjct: 73 PNSTFR--CVQMLEWFEHHGHICIVFELL 99
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI
domain, IG-like domain, extracellular receptor,
neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4
b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Length = 663
Score = 44.0 bits (102), Expect = 5e-04
Identities = 13/91 (14%), Positives = 29/91 (31%), Gaps = 6/91 (6%)
Query: 108 LTLQCEATGTPVPKCRWLRNGREI-SSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAY 166
L+C + + W + + +Y + L +++ D+G Y C +
Sbjct: 551 AELKCSQKS-NLARVFWKFQNGVLKAESPKYGLMGRKN---LLIFNLSEGDSGVYQCLSE 606
Query: 167 NSVGFAHTSSRVKIGTPPRIDRMPNALYIPE 197
T +V + +P + P
Sbjct: 607 ER-VKNKTVFQVVAKHVLEVKVVPKPVVAPT 636
Score = 44.0 bits (102), Expect = 5e-04
Identities = 13/91 (14%), Positives = 29/91 (31%), Gaps = 6/91 (6%)
Query: 1715 LTLQCEATGTPVPKCRWLRNGREI-SSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAY 1773
L+C + + W + + +Y + L +++ D+G Y C +
Sbjct: 551 AELKCSQKS-NLARVFWKFQNGVLKAESPKYGLMGRKN---LLIFNLSEGDSGVYQCLSE 606
Query: 1774 NSVGFAHTSSRVKIGTPPRIDRMPNALYIPE 1804
T +V + +P + P
Sbjct: 607 ER-VKNKTVFQVVAKHVLEVKVVPKPVVAPT 636
Score = 38.2 bits (87), Expect = 0.035
Identities = 12/98 (12%), Positives = 30/98 (30%), Gaps = 4/98 (4%)
Query: 488 RNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVD 547
R A+ +C+ + W + + + + L+I ++ D
Sbjct: 541 RQHFFKHGGTAELKCSQKS-NLARVFWKFQNGVLKAESPKYGLMGRKN--LLIFNLSEGD 597
Query: 548 ADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPRFRDT 585
+ Y C + T +++ + V P+
Sbjct: 598 SGVYQCLSEE-RVKNKTVFQVVAKHVLEVKVVPKPVVA 634
Score = 38.2 bits (87), Expect = 0.035
Identities = 12/98 (12%), Positives = 30/98 (30%), Gaps = 4/98 (4%)
Query: 2095 RNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVD 2154
R A+ +C+ + W + + + + L+I ++ D
Sbjct: 541 RQHFFKHGGTAELKCSQKS-NLARVFWKFQNGVLKAESPKYGLMGRKN--LLIFNLSEGD 597
Query: 2155 ADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPRFRDT 2192
+ Y C + T +++ + V P+
Sbjct: 598 SGVYQCLSEE-RVKNKTVFQVVAKHVLEVKVVPKPVVA 634
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene,
ATP-binding, cell cycle, disea mutation, glycoprotein,
membrane, nucleotide-binding; HET: 03P; 1.50A {Homo
sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A*
1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A*
2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A*
2jiu_A* ...
Length = 327
Score = 43.5 bits (103), Expect = 6e-04
Identities = 17/69 (24%), Positives = 29/69 (42%), Gaps = 13/69 (18%)
Query: 824 ILEEIGTGAFGVVHRCRERKTGNIFAAKFIPV---------SHNLEKELIRKEIDIMNQL 874
++ +G+GAFG V++ G IPV S KE++ E +M +
Sbjct: 19 KIKVLGSGAFGTVYKGLWIPEGE---KVKIPVAIKELREATSPKANKEILD-EAYVMASV 74
Query: 875 HHPKLINLH 883
+P + L
Sbjct: 75 DNPHVCRLL 83
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase,
quinoxaline, alternative splicing, ATP-binding,
chromosomal rearrangement; HET: IHX; 1.40A {Homo
sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A*
2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A*
2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A*
3ctj_A* ...
Length = 298
Score = 43.4 bits (103), Expect = 6e-04
Identities = 15/68 (22%), Positives = 21/68 (30%), Gaps = 14/68 (20%)
Query: 824 ILEEIGTGAFGVVHRCRERKTGNIFAAKFIPV---------SHNLEKELIRKEIDIMNQL 874
E IG G FG V+ K I + + E IM
Sbjct: 29 FNEVIGRGHFGCVYHGTLLDNDG----KKIHCAVKSLNRITDIGEVSQFLT-EGIIMKDF 83
Query: 875 HHPKLINL 882
HP +++L
Sbjct: 84 SHPNVLSL 91
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase;
HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A*
2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Length = 327
Score = 43.5 bits (103), Expect = 6e-04
Identities = 16/110 (14%), Positives = 38/110 (34%), Gaps = 16/110 (14%)
Query: 797 QYVFDIYSKYVPQPVDIKTSSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPV- 855
Y F + + ++ ++ ++ +G GAFG V+ + G + V
Sbjct: 11 NYCFAGKTSSISDLKEVPRKNI----TLIRGLGHGAFGEVYEGQVS--GMPNDPSPLQVA 64
Query: 856 --------SHNLEKELIRKEIDIMNQLHHPKLINLHDAFEDDDEMVLIFE 897
S E + + E I+++ +H ++ ++ E
Sbjct: 65 VKTLPEVCSEQDELDFLM-EALIISKFNHQNIVRCIGVSLQSLPRFILME 113
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase
domain, hormone-growth factor complex; 1.50A {Homo
sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A*
1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A*
3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A*
1gag_A* 1irk_A 3bu3_A* ...
Length = 322
Score = 43.4 bits (103), Expect = 6e-04
Identities = 15/83 (18%), Positives = 30/83 (36%), Gaps = 12/83 (14%)
Query: 824 ILEEIGTGAFGVVHRCRERKTGNIFAAKFIPV---------SHNLEKELIRKEIDIMNQL 874
+ E+G G+FG+V+ + G + V S E + E +M +
Sbjct: 29 MSRELGQGSFGMVYEGVAK--GVVKDEPETRVAIKTVNEAASMRERIEFLN-EASVMKEF 85
Query: 875 HHPKLINLHDAFEDDDEMVLIFE 897
+ ++ L ++I E
Sbjct: 86 NCHHVVRLLGVVSQGQPTLVIME 108
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase;
HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Length = 333
Score = 43.1 bits (102), Expect = 7e-04
Identities = 16/68 (23%), Positives = 25/68 (36%), Gaps = 11/68 (16%)
Query: 824 ILEEIGTGAFGVVHRCRERKTGNIFAAKFIPV--------SHNLEKELIRKEIDIMNQLH 875
+ IG G FG V++ + + K +PV ++ E IM Q
Sbjct: 48 RQKVIGAGEFGEVYKGMLKTSS---GKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFS 104
Query: 876 HPKLINLH 883
H +I L
Sbjct: 105 HHNIIRLE 112
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment,
structural genomics, mutant, structural genomics
consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB:
2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A
2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A*
2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Length = 373
Score = 43.1 bits (102), Expect = 7e-04
Identities = 18/69 (26%), Positives = 26/69 (37%), Gaps = 14/69 (20%)
Query: 824 ILEEIGTGAFGVVHRCRERKTGNIFAAKFIPV---------SHNLEKELIRKEIDIMNQL 874
I + +G G FG V R + K I V + ++ + E IM Q
Sbjct: 49 IDKVVGAGEFGEVCSGRLKLPSK----KEISVAIKTLKVGYTEKQRRDFLG-EASIMGQF 103
Query: 875 HHPKLINLH 883
HP +I L
Sbjct: 104 DHPNIIRLE 112
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding,
glycoprotein, membrane, nucleotide-binding,
phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Length = 367
Score = 43.2 bits (102), Expect = 8e-04
Identities = 16/111 (14%), Positives = 38/111 (34%), Gaps = 16/111 (14%)
Query: 796 DQYVFDIYSKYVPQPVDIKTSSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPV 855
Y F + + ++ ++ ++ +G GAFG V+ + G + V
Sbjct: 51 PNYCFAGKTSSISDLKEVPRKNI----TLIRGLGHGAFGEVYEGQVS--GMPNDPSPLQV 104
Query: 856 ---------SHNLEKELIRKEIDIMNQLHHPKLINLHDAFEDDDEMVLIFE 897
S E + + E I+++ +H ++ ++ E
Sbjct: 105 AVKTLPEVCSEQDELDFLM-EALIISKFNHQNIVRCIGVSLQSLPRFILLE 154
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural
genomics, structural genom consortium, SGC, ATP-binding,
membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A
3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Length = 281
Score = 42.6 bits (101), Expect = 8e-04
Identities = 19/64 (29%), Positives = 24/64 (37%), Gaps = 4/64 (6%)
Query: 824 ILEEIGTGAFGVVHR--CRERKTGNIFAA-KFIPVSHNL-EKELIRKEIDIMNQLHHPKL 879
+ +G G FG V+ K I A K L KE E IM L HP +
Sbjct: 16 LNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHI 75
Query: 880 INLH 883
+ L
Sbjct: 76 VKLI 79
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain,
alternative splicing, ATP-binding, disease MU kinase,
metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Length = 307
Score = 42.7 bits (101), Expect = 8e-04
Identities = 12/61 (19%), Positives = 27/61 (44%), Gaps = 5/61 (8%)
Query: 824 ILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELI--RKEIDIMNQLHHPKLIN 881
+ IG+G+FG V++ + A K + V ++ R E+ ++ + H ++
Sbjct: 40 LSTRIGSGSFGTVYKGKWHGD---VAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILL 96
Query: 882 L 882
Sbjct: 97 F 97
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor,
receptor tyrosine kinase, spirocyc kinase domain,
phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus
musculus}
Length = 323
Score = 43.1 bits (102), Expect = 8e-04
Identities = 13/64 (20%), Positives = 24/64 (37%), Gaps = 5/64 (7%)
Query: 824 ILEEIGTGAFGVVHRCRERKTGNIF---AAKFIPVSHNLEKELIR--KEIDIMNQLHHPK 878
+ +G G FG V + ++ F A K + ++ +E M + HP
Sbjct: 27 LGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPH 86
Query: 879 LINL 882
+ L
Sbjct: 87 VAKL 90
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES,
fujinami, avian sarcoma, viral, feline virus, SGC; HET:
STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Length = 377
Score = 43.0 bits (102), Expect = 9e-04
Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Query: 824 ILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKEL-IRKEIDIMNQLHHPKLINL 882
+ E+IG G FG V R R + A K + + + +E I+ Q HP ++ L
Sbjct: 118 LGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRL 177
Query: 883 H 883
Sbjct: 178 I 178
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor,
PF670462, transferase-transferase I complex; HET: 0CK;
1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Length = 296
Score = 42.7 bits (101), Expect = 0.001
Identities = 17/83 (20%), Positives = 33/83 (39%), Gaps = 3/83 (3%)
Query: 818 VYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQLHHP 877
V + Y + +IG+G+FG ++ + G A K + + E I +
Sbjct: 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKL--ECVKTKHPQLHIESKIYKMMQGG 64
Query: 878 KLI-NLHDAFEDDDEMVLIFEVL 899
I + + D V++ E+L
Sbjct: 65 VGIPTIRWCGAEGDYNVMVMELL 87
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like
folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4
b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A
2dyp_D 2otp_A 3q2c_A
Length = 198
Score = 41.7 bits (98), Expect = 0.001
Identities = 26/164 (15%), Positives = 49/164 (29%), Gaps = 14/164 (8%)
Query: 101 VVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGD 160
V+ G +TL+C+ + R R + R E + +T G
Sbjct: 15 VITQGSPVTLRCQGG-QETQEYRLYREKKTAPWITRIPQEL-VKKGQFPIPSITWEHTGR 72
Query: 161 YTCEAYN-SVGFAHTSSRVKIGT-----PPRIDRMPNALYIPEGDNTKVKIFYAGDQPME 214
Y C + + G + +S +++ P + P+ + G N V + +
Sbjct: 73 YRCYYGSDTAGRSESSDPLELVVTGAYIKPTLSAQPSP-VVNSGGN--VTLQCDSQVAFD 129
Query: 215 -VSLTKNGR--VVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYT 255
L K G Q + I + + Y
Sbjct: 130 GFILCKEGEDEHPQCLNSQPHARGSSRAIFSVGPVSPSRRWWYR 173
Score = 41.7 bits (98), Expect = 0.001
Identities = 26/164 (15%), Positives = 49/164 (29%), Gaps = 14/164 (8%)
Query: 1708 VVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGD 1767
V+ G +TL+C+ + R R + R E + +T G
Sbjct: 15 VITQGSPVTLRCQGG-QETQEYRLYREKKTAPWITRIPQEL-VKKGQFPIPSITWEHTGR 72
Query: 1768 YTCEAYN-SVGFAHTSSRVKIGT-----PPRIDRMPNALYIPEGDNTKVKIFYAGDQPME 1821
Y C + + G + +S +++ P + P+ + G N V + +
Sbjct: 73 YRCYYGSDTAGRSESSDPLELVVTGAYIKPTLSAQPSP-VVNSGGN--VTLQCDSQVAFD 129
Query: 1822 -VSLTKNGR--VVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYT 1862
L K G Q + I + + Y
Sbjct: 130 GFILCKEGEDEHPQCLNSQPHARGSSRAIFSVGPVSPSRRWWYR 173
Score = 39.1 bits (91), Expect = 0.006
Identities = 25/102 (24%), Positives = 37/102 (36%), Gaps = 7/102 (6%)
Query: 69 GKSEPSICTTPVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNG 128
G+SE S P+++ KP + VV G +TLQC+ + + G
Sbjct: 83 GRSESS---DPLELVVTGAYIKP-TLSAQPSPVVNSGGNVTLQCD-SQVAFDGFILCKEG 137
Query: 129 REISSGARYRVETAGGVFRLHF--NEVTDVDNGDYTCEAYNS 168
+ A G R F V+ Y C AY+S
Sbjct: 138 EDEHPQCLNSQPHARGSSRAIFSVGPVSPSRRWWYRCYAYDS 179
Score = 39.1 bits (91), Expect = 0.006
Identities = 25/102 (24%), Positives = 37/102 (36%), Gaps = 7/102 (6%)
Query: 1676 GKSEPSICTTPVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNG 1735
G+SE S P+++ KP + VV G +TLQC+ + + G
Sbjct: 83 GRSESS---DPLELVVTGAYIKP-TLSAQPSPVVNSGGNVTLQCD-SQVAFDGFILCKEG 137
Query: 1736 REISSGARYRVETAGGVFRLHF--NEVTDVDNGDYTCEAYNS 1775
+ A G R F V+ Y C AY+S
Sbjct: 138 EDEHPQCLNSQPHARGSSRAIFSVGPVSPSRRWWYRCYAYDS 179
>3q0h_A T cell immunoreceptor with IG and ITIM domains; immune receptor,
adhesion, structural genomics, NEW YORK STR genomics
research consortium, nysgrc; 1.70A {Homo sapiens} PDB:
3rq3_A 3udw_A* 3ucr_A
Length = 117
Score = 39.9 bits (93), Expect = 0.001
Identities = 20/109 (18%), Positives = 33/109 (30%), Gaps = 15/109 (13%)
Query: 94 IVPLKDLVVPLGKLLTLQCEATGTPVPKCR--WLR-----------NGREISSGARYRVE 140
I ++ G + LQC + T + W + G IS + RV
Sbjct: 7 IETTGNISAEKGGSIILQCHLSSTTAQVTQVNWEQQDQLLAICNADLGWHISPSFKDRVA 66
Query: 141 TAGGVFRLHFNEVTDVDNGDYTCE-AYNSVGFAHTSSRVKIGTPPRIDR 188
G L +T D G+Y C G +++ +
Sbjct: 67 PGPG-LGLTLQSLTVNDTGEYFCIYHTYPDGTYTGRIFLEVLESSVAEH 114
Score = 39.9 bits (93), Expect = 0.001
Identities = 20/109 (18%), Positives = 33/109 (30%), Gaps = 15/109 (13%)
Query: 1701 IVPLKDLVVPLGKLLTLQCEATGTPVPKCR--WLR-----------NGREISSGARYRVE 1747
I ++ G + LQC + T + W + G IS + RV
Sbjct: 7 IETTGNISAEKGGSIILQCHLSSTTAQVTQVNWEQQDQLLAICNADLGWHISPSFKDRVA 66
Query: 1748 TAGGVFRLHFNEVTDVDNGDYTCE-AYNSVGFAHTSSRVKIGTPPRIDR 1795
G L +T D G+Y C G +++ +
Sbjct: 67 PGPG-LGLTLQSLTVNDTGEYFCIYHTYPDGTYTGRIFLEVLESSVAEH 114
Score = 29.9 bits (67), Expect = 3.3
Identities = 9/76 (11%), Positives = 25/76 (32%), Gaps = 4/76 (5%)
Query: 210 DQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYT--VNLSNSSGSVSG 267
DQ + + G + + + + ++ + D G+Y + + G+ +G
Sbjct: 43 DQLLAICNADLGWHISPSFKDRVAPGPGLGLT-LQSLTVNDTGEYFCIYH-TYPDGTYTG 100
Query: 268 TFTINITGLPGPPIGP 283
+ + G
Sbjct: 101 RIFLEVLESSVAEHGA 116
Score = 29.9 bits (67), Expect = 3.3
Identities = 9/76 (11%), Positives = 25/76 (32%), Gaps = 4/76 (5%)
Query: 1817 DQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYT--VNLSNSSGSVSG 1874
DQ + + G + + + + ++ + D G+Y + + G+ +G
Sbjct: 43 DQLLAICNADLGWHISPSFKDRVAPGPGLGLT-LQSLTVNDTGEYFCIYH-TYPDGTYTG 100
Query: 1875 TFTINITGLPGPPIGP 1890
+ + G
Sbjct: 101 RIFLEVLESSVAEHGA 116
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A
{Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A*
2csn_A*
Length = 298
Score = 42.3 bits (100), Expect = 0.001
Identities = 20/83 (24%), Positives = 32/83 (38%), Gaps = 3/83 (3%)
Query: 818 VYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQLHHP 877
V HY + IG G+FGV+ A KF + +R E L
Sbjct: 8 VGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKF--EPRRSDAPQLRDEYRTYKLLAGC 65
Query: 878 KLI-NLHDAFEDDDEMVLIFEVL 899
I N++ ++ VL+ ++L
Sbjct: 66 TGIPNVYYFGQEGLHNVLVIDLL 88
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain,
transferase, transferase-transferase inhibito; HET: 07J;
2.80A {Homo sapiens}
Length = 382
Score = 42.7 bits (101), Expect = 0.001
Identities = 19/84 (22%), Positives = 32/84 (38%), Gaps = 11/84 (13%)
Query: 824 ILEEIGTGAFGVVHRCRERKTGNIFAAKFIPV---------SHNLEKELIRKEIDIMNQL 874
+ + +G GAFG V + V + +LI E+++M +
Sbjct: 73 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLIS-EMEMMKMI 131
Query: 875 -HHPKLINLHDAFEDDDEMVLIFE 897
H +INL A D + +I E
Sbjct: 132 GKHKNIINLLGACTQDGPLYVIVE 155
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase;
1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A
3nr9_A*
Length = 355
Score = 42.7 bits (101), Expect = 0.001
Identities = 24/89 (26%), Positives = 38/89 (42%), Gaps = 16/89 (17%)
Query: 822 YDILEEIGTGAFGVVHRCRERKTGNIFAA-KFIPVSHNLEK--ELIRKEIDIMNQL---- 874
Y+I+ +G G FG V C + G A K I N+ K E R EI+++ ++
Sbjct: 21 YEIVGNLGEGTFGKVVECLDHARGKSQVALKII---RNVGKYREAARLEINVLKKIKEKD 77
Query: 875 ----HHPKLINLHDAFEDDDEMVLIFEVL 899
+ + D F M + FE+L
Sbjct: 78 KENKFL--CVLMSDWFNFHGHMCIAFELL 104
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal
transduction, GRB2, SHC, ATP-binding, glycoprotein,
membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Length = 373
Score = 42.4 bits (100), Expect = 0.001
Identities = 15/68 (22%), Positives = 21/68 (30%), Gaps = 14/68 (20%)
Query: 824 ILEEIGTGAFGVVHRCRERKTGNIFAAKFIPV---------SHNLEKELIRKEIDIMNQL 874
E IG G FG V+ K I + + E IM
Sbjct: 93 FNEVIGRGHFGCVYHGTLLDNDG----KKIHCAVKSLNRITDIGEVSQFLT-EGIIMKDF 147
Query: 875 HHPKLINL 882
HP +++L
Sbjct: 148 SHPNVLSL 155
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A
{Homo sapiens}
Length = 184
Score = 41.0 bits (96), Expect = 0.001
Identities = 23/128 (17%), Positives = 42/128 (32%), Gaps = 20/128 (15%)
Query: 101 VVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGD 160
+VPL K +TL+C+ V R + + A L + G
Sbjct: 18 LVPLEKPVTLRCQGP-PGVDLYRLEKLSSSRYQ------DQA----VLFIPAMKRSLAGR 66
Query: 161 YTCEAYNSVGFAHTSSRVKI-----GTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPME- 214
Y C N ++ S ++++ P + P + G + V + +
Sbjct: 67 YRCSYQNGSLWSLPSDQLELVATGVFAKPSLSAQPGPA-VSSGGD--VTLQCQTRYGFDQ 123
Query: 215 VSLTKNGR 222
+L K G
Sbjct: 124 FALYKEGD 131
Score = 41.0 bits (96), Expect = 0.001
Identities = 23/128 (17%), Positives = 42/128 (32%), Gaps = 20/128 (15%)
Query: 1708 VVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGD 1767
+VPL K +TL+C+ V R + + A L + G
Sbjct: 18 LVPLEKPVTLRCQGP-PGVDLYRLEKLSSSRYQ------DQA----VLFIPAMKRSLAGR 66
Query: 1768 YTCEAYNSVGFAHTSSRVKI-----GTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPME- 1821
Y C N ++ S ++++ P + P + G + V + +
Sbjct: 67 YRCSYQNGSLWSLPSDQLELVATGVFAKPSLSAQPGPA-VSSGGD--VTLQCQTRYGFDQ 123
Query: 1822 VSLTKNGR 1829
+L K G
Sbjct: 124 FALYKEGD 131
Score = 37.9 bits (88), Expect = 0.017
Identities = 23/110 (20%), Positives = 36/110 (32%), Gaps = 9/110 (8%)
Query: 59 EFRIIAVNAIGKSEPSICTTPVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTP 118
+R N S PS +++ KP + V G +TLQC+ T
Sbjct: 66 RYRCSYQNGSLWSLPS---DQLELVATGVFAKP-SLSAQPGPAVSSGGDVTLQCQ-TRYG 120
Query: 119 VPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNS 168
+ + G R A VT +G Y C +++S
Sbjct: 121 FDQFALYKEGDPAPYKNPERWYRA----SFPIITVTAAHSGTYRCYSFSS 166
Score = 37.9 bits (88), Expect = 0.017
Identities = 23/110 (20%), Positives = 36/110 (32%), Gaps = 9/110 (8%)
Query: 1666 EFRIIAVNAIGKSEPSICTTPVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEATGTP 1725
+R N S PS +++ KP + V G +TLQC+ T
Sbjct: 66 RYRCSYQNGSLWSLPS---DQLELVATGVFAKP-SLSAQPGPAVSSGGDVTLQCQ-TRYG 120
Query: 1726 VPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNS 1775
+ + G R A VT +G Y C +++S
Sbjct: 121 FDQFALYKEGDPAPYKNPERWYRA----SFPIITVTAAHSGTYRCYSFSS 166
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo
sapiens} SCOP: d.144.1.7
Length = 287
Score = 41.9 bits (99), Expect = 0.001
Identities = 18/65 (27%), Positives = 28/65 (43%), Gaps = 13/65 (20%)
Query: 827 EIGTGAFGVVHRCRERKTGNIFAAKFIPV--------SHNLEKELIRKEIDIMNQLHHPK 878
E+G G FG V + R K I V + + E + +E IM+QL +P
Sbjct: 17 ELGCGNFGSVRQGVYRMRK-----KQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPY 71
Query: 879 LINLH 883
++ L
Sbjct: 72 IVRLI 76
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS
autophosphorylation conformation, recept tyrosine
kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo
sapiens}
Length = 298
Score = 41.9 bits (99), Expect = 0.002
Identities = 16/76 (21%), Positives = 28/76 (36%), Gaps = 4/76 (5%)
Query: 824 ILEEIGTGAFGVVHRCRERKTGNIF---AAKFIPVSHNL-EKELIRKEIDIMNQLHHPKL 879
IG G FGVV+ A K + + + E +E +M L+HP +
Sbjct: 25 SDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNV 84
Query: 880 INLHDAFEDDDEMVLI 895
+ L + + +
Sbjct: 85 LALIGIMLPPEGLPHV 100
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells,
immunological receptors, immunoglobulin fold; 1.70A
{Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D
2dli_A 2dl2_A 3h8n_A
Length = 201
Score = 40.7 bits (95), Expect = 0.002
Identities = 22/133 (16%), Positives = 42/133 (31%), Gaps = 16/133 (12%)
Query: 101 VVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFR--LHFNEVTDVDN 158
+V + + LQC + R G + R E GV + + +T
Sbjct: 18 LVKSEETVILQCWSD-VMFEHFLLHREGMFNDTL-RLIGEHHDGVSKANFSISRMTQDLA 75
Query: 159 GDYTCEAYNSVGFAHTSSR--------VKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGD 210
G Y C + S+ + + P + P + G+N V + +
Sbjct: 76 GTYRCYGSVTHSPYQVSAPSDPLDIVIIGLYEKPSLSAQPGP-TVLAGEN--VTLSCSSR 132
Query: 211 QPME-VSLTKNGR 222
+ L++ G
Sbjct: 133 SSYDMYHLSREGE 145
Score = 40.7 bits (95), Expect = 0.002
Identities = 22/133 (16%), Positives = 42/133 (31%), Gaps = 16/133 (12%)
Query: 1708 VVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFR--LHFNEVTDVDN 1765
+V + + LQC + R G + R E GV + + +T
Sbjct: 18 LVKSEETVILQCWSD-VMFEHFLLHREGMFNDTL-RLIGEHHDGVSKANFSISRMTQDLA 75
Query: 1766 GDYTCEAYNSVGFAHTSSR--------VKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGD 1817
G Y C + S+ + + P + P + G+N V + +
Sbjct: 76 GTYRCYGSVTHSPYQVSAPSDPLDIVIIGLYEKPSLSAQPGP-TVLAGEN--VTLSCSSR 132
Query: 1818 QPME-VSLTKNGR 1829
+ L++ G
Sbjct: 133 SSYDMYHLSREGE 145
Score = 34.9 bits (80), Expect = 0.17
Identities = 13/68 (19%), Positives = 18/68 (26%), Gaps = 2/68 (2%)
Query: 101 VVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGD 160
V G+ +TL C + + R G G F+ F G
Sbjct: 118 TVLAGENVTLSCS-SRSSYDMYHLSREGEAHERR-LPAGPKVNGTFQADFPLGPATHGGT 175
Query: 161 YTCEAYNS 168
Y C
Sbjct: 176 YRCFGSFH 183
Score = 34.9 bits (80), Expect = 0.17
Identities = 13/68 (19%), Positives = 18/68 (26%), Gaps = 2/68 (2%)
Query: 1708 VVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGD 1767
V G+ +TL C + + R G G F+ F G
Sbjct: 118 TVLAGENVTLSCS-SRSSYDMYHLSREGEAHERR-LPAGPKVNGTFQADFPLGPATHGGT 175
Query: 1768 YTCEAYNS 1775
Y C
Sbjct: 176 YRCFGSFH 183
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol,
transferase; 2.00A {Oryza sativa japonica group}
Length = 483
Score = 41.9 bits (98), Expect = 0.002
Identities = 19/83 (22%), Positives = 35/83 (42%), Gaps = 3/83 (3%)
Query: 818 VYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQLHHP 877
V + + + +IG+G+FG ++ +T A K V + + E I L
Sbjct: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENV--KTKHPQLLYESKIYRILQGG 62
Query: 878 KLI-NLHDAFEDDDEMVLIFEVL 899
I N+ + D VL+ ++L
Sbjct: 63 TGIPNVRWFGVEGDYNVLVMDLL 85
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein
kinase), receptor serine/threonine kinase; 2.60A {Homo
sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A*
3kcf_A*
Length = 342
Score = 41.7 bits (98), Expect = 0.002
Identities = 20/82 (24%), Positives = 30/82 (36%), Gaps = 7/82 (8%)
Query: 824 ILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQLHHPKLINLH 883
+ E IG G FG V R + R G A K S EI L H ++
Sbjct: 46 LQESIGKGRFGEVWRGKWR--GEEVAVKIFS-SREERSWFREAEIYQTVMLRHENILGFI 102
Query: 884 DAFEDDD----EMVLIFEVLDR 901
A D+ ++ L+ + +
Sbjct: 103 AADNKDNGTWTQLWLVSDYHEH 124
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene
homolog; kinase, structure, inhibitor, STI-571, gleevec,
transferase activator; HET: STI; 1.60A {Homo sapiens}
SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Length = 313
Score = 41.5 bits (98), Expect = 0.003
Identities = 20/83 (24%), Positives = 36/83 (43%), Gaps = 11/83 (13%)
Query: 824 ILEEIGTGAFGVVHRCRERKTGNIFAAKFIPV--------SHNLEKELIRKEIDIMNQL- 874
+ +G GAFG V G I + + V +H E+E + E+ +++ L
Sbjct: 27 FGKTLGAGAFGKVVEATAY--GLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLG 84
Query: 875 HHPKLINLHDAFEDDDEMVLIFE 897
+H ++NL A ++I E
Sbjct: 85 NHMNIVNLLGACTIGGPTLVITE 107
>1xiw_A T-cell surface glycoprotein CD3 epsilon chain; CD3-epsilon,
CD3-delta, UCHT1-SCFV, immunoglobulin fold,
antibody-antigen complex; 1.90A {Homo sapiens} SCOP:
b.1.1.4
Length = 105
Score = 38.2 bits (88), Expect = 0.003
Identities = 15/84 (17%), Positives = 22/84 (26%), Gaps = 2/84 (2%)
Query: 87 GGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVF 146
G E+ I V G + L C P + W N + I + +
Sbjct: 3 GNEEMGGITQTPYKVSISGTTVILTCPQY--PGSEILWQHNDKNIGGDEDDKNIGSDEDH 60
Query: 147 RLHFNEVTDVDNGDYTCEAYNSVG 170
+G Y C S
Sbjct: 61 LSLKEFSELEQSGYYVCYPRGSKP 84
Score = 38.2 bits (88), Expect = 0.003
Identities = 15/84 (17%), Positives = 22/84 (26%), Gaps = 2/84 (2%)
Query: 1694 GGEKPDFIVPLKDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVF 1753
G E+ I V G + L C P + W N + I + +
Sbjct: 3 GNEEMGGITQTPYKVSISGTTVILTCPQY--PGSEILWQHNDKNIGGDEDDKNIGSDEDH 60
Query: 1754 RLHFNEVTDVDNGDYTCEAYNSVG 1777
+G Y C S
Sbjct: 61 LSLKEFSELEQSGYYVCYPRGSKP 84
Score = 33.2 bits (75), Expect = 0.18
Identities = 7/57 (12%), Positives = 13/57 (22%)
Query: 508 PKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKST 564
P I W + I + + + + YVC +
Sbjct: 32 PGSEILWQHNDKNIGGDEDDKNIGSDEDHLSLKEFSELEQSGYYVCYPRGSKPEDAN 88
Score = 33.2 bits (75), Expect = 0.18
Identities = 7/57 (12%), Positives = 13/57 (22%)
Query: 2115 PKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKST 2171
P I W + I + + + + YVC +
Sbjct: 32 PGSEILWQHNDKNIGGDEDDKNIGSDEDHLSLKEFSELEQSGYYVCYPRGSKPEDAN 88
Score = 29.0 bits (64), Expect = 5.4
Identities = 12/57 (21%), Positives = 26/57 (45%), Gaps = 3/57 (5%)
Query: 591 GENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAPY 647
G V++ P YP +I W +++ I S+ L++++ S ++ + Y
Sbjct: 21 GTTVILTCPQ--YPGSEILWQHNDKNIGGDEDDKNIGSDEDH-LSLKEFSELEQSGY 74
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen
typrosine kinase, active conformation, structural
genomics, structural genomix; HET: STI; 1.57A {Homo
sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A*
3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A*
3vf9_A*
Length = 291
Score = 40.7 bits (96), Expect = 0.003
Identities = 15/67 (22%), Positives = 27/67 (40%), Gaps = 16/67 (23%)
Query: 827 EIGTGAFGVVHRCRERKTGNIFAAKFIPV----------SHNLEKELIRKEIDIMNQLHH 876
E+G+G FG V + + V L+ EL+ E ++M QL +
Sbjct: 24 ELGSGNFGTVKKGYYQMKK-----VVKTVAVKILKNEANDPALKDELLA-EANVMQQLDN 77
Query: 877 PKLINLH 883
P ++ +
Sbjct: 78 PYIVRMI 84
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition,
kinase-INH complex, rubredoxin fold, TPR domain,
transferase; HET: AXX; 2.40A {Mycobacterium
tuberculosis}
Length = 681
Score = 41.4 bits (97), Expect = 0.004
Identities = 13/74 (17%), Positives = 28/74 (37%), Gaps = 2/74 (2%)
Query: 820 DHYDILEEIGTGAFGVVHRCR-ERKTGNIFAAKFIPVSHNLE-KELIRKEIDIMNQLHHP 877
Y++ I G G ++ G K + S + E + + E + ++ HP
Sbjct: 80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHP 139
Query: 878 KLINLHDAFEDDDE 891
++ + + E D
Sbjct: 140 SIVQIFNFVEHTDR 153
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2,
autoinhibition, ITAM, hydrogen bonding network, TCR
signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Length = 613
Score = 41.5 bits (97), Expect = 0.004
Identities = 18/65 (27%), Positives = 28/65 (43%), Gaps = 13/65 (20%)
Query: 827 EIGTGAFGVVHRCRERKTGNIFAAKFIPV--------SHNLEKELIRKEIDIMNQLHHPK 878
E+G G FG V + R K I V + + E + +E IM+QL +P
Sbjct: 343 ELGCGNFGSVRQGVYRMRK-----KQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPY 397
Query: 879 LINLH 883
++ L
Sbjct: 398 IVRLI 402
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline,
aortic aneurysm, ATP-binding, craniosynostosis, disease
mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens}
PDB: 1vjy_A* 3gxl_A* 3hmm_A* 2wot_A* 2wou_A* 1py5_A*
1rw8_A*
Length = 303
Score = 40.4 bits (95), Expect = 0.005
Identities = 17/55 (30%), Positives = 19/55 (34%), Gaps = 3/55 (5%)
Query: 823 DILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQLHHP 877
+ E IG G FG V R + R G A K S EI L H
Sbjct: 6 VLQESIGKGRFGEVWRGKWR--GEEVAVKIFS-SREERSWFREAEIYQTVMLRHE 57
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC,
protein kinase, transfe; HET: LDN FLC; 1.82A {Homo
sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Length = 301
Score = 40.4 bits (95), Expect = 0.005
Identities = 14/54 (25%), Positives = 21/54 (38%), Gaps = 3/54 (5%)
Query: 824 ILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQLHHP 877
+LE +G G +G V R + G A K S + + E+ L H
Sbjct: 12 LLECVGKGRYGEVWRGSWQ--GENVAVKIFS-SRDEKSWFRETELYNTVMLRHE 62
>1iam_A ICAM-1, CD54, intercellular adhesion molecule-1; rhinovirus
receptor, cell adhesion, integrin ligand, glycopr LFA-1
ligand, immunoglobulin fold; HET: NAG; 2.10A {Homo
sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ic1_A* 1d3l_A
1d3e_I 1d3i_I 3tcx_A
Length = 185
Score = 39.3 bits (91), Expect = 0.006
Identities = 29/190 (15%), Positives = 66/190 (34%), Gaps = 17/190 (8%)
Query: 482 EIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIIN 541
+ V + + C+ T C +P + ++ TP + + G+ +
Sbjct: 1 QTSVSPSKVILPRGGSVLVTCS-TSCDQPKLLGIE-----TPLPKKELLLPGNNRKVYEL 54
Query: 542 SVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVK--IP 599
S D+ + +C + G + K L + P+ V + G+ + ++ +
Sbjct: 55 SNVQEDS-QPMCYSNCPDGQSTAKTFLTVYWTPE-RVELAPLPSWQP-VGKQLTLRCQVE 111
Query: 600 FTGYPKPKIT--WYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAPYRVVAENDLGM 657
G P+ ++T R + ++ E +E + +R + A + E DL
Sbjct: 112 -GGAPRAQLTVVLLRGEKELKREP-AVGEPAEVTTTVLVR--RDHHGAQFSCRTELDLRP 167
Query: 658 DSAIVKIQIS 667
+ S
Sbjct: 168 QGLELFENTS 177
Score = 33.5 bits (76), Expect = 0.48
Identities = 19/159 (11%), Positives = 51/159 (32%), Gaps = 15/159 (9%)
Query: 98 KDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVD 157
+++P G + + C + E + + + V +
Sbjct: 7 SKVILPRGGSVLVTCSTSCDQPKLLGI-----ETPLPKKELLLPGNNRKVYELSNVQE-- 59
Query: 158 NGDYTCEAYNSVGFAHTSSRVKIGTPP-RIDRMPNALYIPEGDNTKVKIFYAGDQP---M 213
+ C + G + + + + P R++ P + P G ++ G P +
Sbjct: 60 DSQPMCYSNCPDGQSTAKTFLTVYWTPERVELAPLPSWQPVGKQLTLRCQVEGGAPRAQL 119
Query: 214 EVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAG 252
V L + + ++ + V + + +R++ G
Sbjct: 120 TVVLLRGEKELKREP----AVGEPAEVTTTVLVRRDHHG 154
Score = 33.5 bits (76), Expect = 0.48
Identities = 19/159 (11%), Positives = 51/159 (32%), Gaps = 15/159 (9%)
Query: 1705 KDLVVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVD 1764
+++P G + + C + E + + + V +
Sbjct: 7 SKVILPRGGSVLVTCSTSCDQPKLLGI-----ETPLPKKELLLPGNNRKVYELSNVQE-- 59
Query: 1765 NGDYTCEAYNSVGFAHTSSRVKIGTPP-RIDRMPNALYIPEGDNTKVKIFYAGDQP---M 1820
+ C + G + + + + P R++ P + P G ++ G P +
Sbjct: 60 DSQPMCYSNCPDGQSTAKTFLTVYWTPERVELAPLPSWQPVGKQLTLRCQVEGGAPRAQL 119
Query: 1821 EVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAG 1859
V L + + ++ + V + + +R++ G
Sbjct: 120 TVVLLRGEKELKREP----AVGEPAEVTTTVLVRRDHHG 154
Score = 31.6 bits (71), Expect = 2.1
Identities = 11/76 (14%), Positives = 24/76 (31%), Gaps = 6/76 (7%)
Query: 2090 IIVPLRNANAIQNHNAQFQCTITGC---PKPTISWLKGSREITPSARHHIFAEGDTYTLI 2146
+ + + +C + G + T+ L+G +E+ R E T
Sbjct: 89 VELAPLPSWQPVGKQLTLRCQVEGGAPRAQLTVVLLRGEKELK---REPAVGEPAEVTTT 145
Query: 2147 INSVYGVDADEYVCRA 2162
+ ++ CR
Sbjct: 146 VLVRRDHHGAQFSCRT 161
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC,
transferase, protein KI; HET: GVD; 1.95A {Homo sapiens}
PDB: 3q4t_A* 2qlu_A*
Length = 322
Score = 40.1 bits (94), Expect = 0.006
Identities = 11/63 (17%), Positives = 21/63 (33%), Gaps = 3/63 (4%)
Query: 820 DHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQLHHPKL 879
+LE G FG V + + A K P+ + E+ + + H +
Sbjct: 24 MPLQLLEVKARGRFGCVWKAQLL--NEYVAVKIFPIQDKQSWQ-NEYEVYSLPGMKHENI 80
Query: 880 INL 882
+
Sbjct: 81 LQF 83
>3mdy_A Bone morphogenetic protein receptor type-1B; complex
(isomerase-protein kinase), receptor serine/threonin
structural genomics consortium, SGC; HET: LDN; 2.05A
{Homo sapiens}
Length = 337
Score = 40.1 bits (94), Expect = 0.006
Identities = 12/54 (22%), Positives = 20/54 (37%), Gaps = 3/54 (5%)
Query: 824 ILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQLHHP 877
++++IG G +G V + R G A K + EI + H
Sbjct: 41 MVKQIGKGRYGEVWMGKWR--GEKVAVKVFF-TTEEASWFRETEIYQTVLMRHE 91
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain,
kinase inhibitor complex, transferase; HET: 5CN; 1.80A
{Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A*
3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Length = 333
Score = 40.3 bits (95), Expect = 0.006
Identities = 22/83 (26%), Positives = 34/83 (40%), Gaps = 11/83 (13%)
Query: 824 ILEEIGTGAFGVVHRCRERKTGNIFAAKFIPV--------SHNLEKELIRKEIDIMNQL- 874
+ +G GAFG V G + V +H EKE + E+ IM+ L
Sbjct: 50 FGKTLGAGAFGKVVEA--TAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLG 107
Query: 875 HHPKLINLHDAFEDDDEMVLIFE 897
H ++NL A +++I E
Sbjct: 108 QHENIVNLLGACTHGGPVLVITE 130
>1wft_A 1700129L13RIK protein; FN3 domain, similar to HOST cell factor 2,
structural genomics, riken structural
genomics/proteomics initiative, RSGI; NMR {Mus musculus}
SCOP: b.1.2.1
Length = 123
Score = 38.0 bits (87), Expect = 0.007
Identities = 23/105 (21%), Positives = 35/105 (33%), Gaps = 18/105 (17%)
Query: 274 TGLPGPPIGPLDVSEITKHTCTLH--WNPPKYDGG--LKVTHYVVERRDISMPHWICIST 329
+ P P V I+K+ +H W PP G L+ + Y+ R + +
Sbjct: 2 SSGSSGPGAPSTVR-ISKNVDGIHLSWEPPTSPSGNILEYSAYLAIRTAQMQDNPSQLVF 60
Query: 330 TC----HDTTFIVQGL---------TEGQEYLFHVMAVNENGMGP 361
T+ V T +F + A NE G GP
Sbjct: 61 MRIYCGLKTSCTVTAGQLANAHIDYTSRPAIVFRISAKNEKGYGP 105
Score = 38.0 bits (87), Expect = 0.007
Identities = 23/105 (21%), Positives = 35/105 (33%), Gaps = 18/105 (17%)
Query: 1881 TGLPGPPIGPLDVSEITKHTCTLH--WNPPKYDGG--LKVTHYVVERRDISMPHWICIST 1936
+ P P V I+K+ +H W PP G L+ + Y+ R + +
Sbjct: 2 SSGSSGPGAPSTVR-ISKNVDGIHLSWEPPTSPSGNILEYSAYLAIRTAQMQDNPSQLVF 60
Query: 1937 TC----HDTTFIVQGL---------TEGQEYLFHVMAVNENGMGP 1968
T+ V T +F + A NE G GP
Sbjct: 61 MRIYCGLKTSCTVTAGQLANAHIDYTSRPAIVFRISAKNEKGYGP 105
Score = 35.3 bits (80), Expect = 0.060
Identities = 21/100 (21%), Positives = 34/100 (34%), Gaps = 18/100 (18%)
Query: 1231 PSPPQGPLDVS-DITPESCSLSWKPPLDDGG--SPITNYVVEKYESATGFWSKLSSFVR- 1286
S P P V + LSW+PP G + Y+ + S+L F+R
Sbjct: 5 SSGPGAPSTVRISKNVDGIHLSWEPPTSPSGNILEYSAYLAIRTAQMQDNPSQL-VFMRI 63
Query: 1287 ----SPAYDVFGLETNRQYR---------FRVRAENQYGV 1313
+ V + + FR+ A+N+ G
Sbjct: 64 YCGLKTSCTVTAGQLANAHIDYTSRPAIVFRISAKNEKGY 103
Score = 34.1 bits (77), Expect = 0.14
Identities = 24/121 (19%), Positives = 34/121 (28%), Gaps = 24/121 (19%)
Query: 1002 PGAPGAPK--GVDSTEDSISLVWSKPRHDGGSPIQR--YIVEKRLISDDKWIKASMAHIP 1057
PGAP + D I L W P G+ ++ Y+ + D + I
Sbjct: 5 SSGPGAPSTVRISKNVDGIHLSWEPPTSPSGNILEYSAYLAIRTAQMQDNPSQLVFMRI- 63
Query: 1058 DTSLKYVLWVSEGKSIGSERGSTAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAGQG 1117
G + T +L N FR+ A N G G
Sbjct: 64 --------------YCGLKTSCTVTAGQL-----ANAHIDYTSRPAIVFRISAKNEKGYG 104
Query: 1118 P 1118
P
Sbjct: 105 P 105
Score = 34.1 bits (77), Expect = 0.14
Identities = 16/96 (16%), Positives = 30/96 (31%), Gaps = 16/96 (16%)
Query: 902 PHPPENLHADEFAGDSLTLYWTPPRDNGG--SEITNYVVEKKDYNSTVWTKVSSYV---- 955
P P + D + L W PP G E + Y+ + +++
Sbjct: 8 PGAPSTVRI-SKNVDGIHLSWEPPTSPSGNILEYSAYLAIRTAQMQDNPSQLVFMRIYCG 66
Query: 956 TTPFVRVRNLAIGSTYE---------FRVMAENQYG 982
V + + + FR+ A+N+ G
Sbjct: 67 LKTSCTVTAGQLANAHIDYTSRPAIVFRISAKNEKG 102
>3nvq_A Semaphorin-7A; beta-propeller, signaling, signaling protein-protein
binding; HET: NAG NDG; 2.40A {Homo sapiens}
Length = 590
Score = 40.4 bits (93), Expect = 0.007
Identities = 11/70 (15%), Positives = 14/70 (20%), Gaps = 5/70 (7%)
Query: 109 TLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNS 168
L C W S L +T G Y CEA
Sbjct: 519 YLSCPMES-RHATYSWRHKENVEQSCEPGHQSPNCI---LFIENLTAQQYGHYFCEAQEG 574
Query: 169 VGFAHTSSRV 178
+ +
Sbjct: 575 -SYFREAQHW 583
Score = 40.4 bits (93), Expect = 0.007
Identities = 11/70 (15%), Positives = 14/70 (20%), Gaps = 5/70 (7%)
Query: 1716 TLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNS 1775
L C W S L +T G Y CEA
Sbjct: 519 YLSCPMES-RHATYSWRHKENVEQSCEPGHQSPNCI---LFIENLTAQQYGHYFCEAQEG 574
Query: 1776 VGFAHTSSRV 1785
+ +
Sbjct: 575 -SYFREAQHW 583
Score = 36.5 bits (83), Expect = 0.11
Identities = 11/72 (15%), Positives = 16/72 (22%), Gaps = 4/72 (5%)
Query: 488 RNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVD 547
+ + N C + T SW H L I ++
Sbjct: 508 QKVSLAPNSRYYLSCPMES-RHATYSWRHKENVEQSCEPGHQSPNCI---LFIENLTAQQ 563
Query: 548 ADEYVCRAVNKG 559
Y C A
Sbjct: 564 YGHYFCEAQEGS 575
Score = 36.5 bits (83), Expect = 0.11
Identities = 11/72 (15%), Positives = 16/72 (22%), Gaps = 4/72 (5%)
Query: 2095 RNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVD 2154
+ + N C + T SW H L I ++
Sbjct: 508 QKVSLAPNSRYYLSCPMES-RHATYSWRHKENVEQSCEPGHQSPNCI---LFIENLTAQQ 563
Query: 2155 ADEYVCRAVNKG 2166
Y C A
Sbjct: 564 YGHYFCEAQEGS 575
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition,
juxtamembrane domain, transferase; 2.10A {Homo sapiens}
SCOP: d.144.1.7
Length = 344
Score = 40.0 bits (94), Expect = 0.007
Identities = 21/82 (25%), Positives = 34/82 (41%), Gaps = 9/82 (10%)
Query: 824 ILEEIGTGAFGVVHRCR-----ERKTGNIFAAKFIPVSHNLE--KELIRKEIDIMNQL-H 875
+ +G+GAFG V + A K + + + L+ E+ +M QL
Sbjct: 49 FGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMS-ELKMMTQLGS 107
Query: 876 HPKLINLHDAFEDDDEMVLIFE 897
H ++NL A + LIFE
Sbjct: 108 HENIVNLLGACTLSGPIYLIFE 129
>3kgr_A LAIR-1, hlair1, leukocyte-associated immunoglobulin-like receptor;
IG-like domain, cell membrane, glycoprotein; 1.80A {Homo
sapiens} PDB: 3rp1_A
Length = 106
Score = 37.4 bits (87), Expect = 0.008
Identities = 17/82 (20%), Positives = 31/82 (37%), Gaps = 3/82 (3%)
Query: 101 VVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVF--RLHFNEVTDVDN 158
V+PLG +T C V R R R + + + R + V++ +
Sbjct: 19 VIPLGSHVTFVCRGP-VGVQTFRLERESRSTYNDTEDVSQASPSESEARFRIDSVSEGNA 77
Query: 159 GDYTCEAYNSVGFAHTSSRVKI 180
G Y C Y ++ S +++
Sbjct: 78 GPYRCIYYKPPKWSEQSDYLEL 99
Score = 37.4 bits (87), Expect = 0.008
Identities = 17/82 (20%), Positives = 31/82 (37%), Gaps = 3/82 (3%)
Query: 1708 VVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVF--RLHFNEVTDVDN 1765
V+PLG +T C V R R R + + + R + V++ +
Sbjct: 19 VIPLGSHVTFVCRGP-VGVQTFRLERESRSTYNDTEDVSQASPSESEARFRIDSVSEGNA 77
Query: 1766 GDYTCEAYNSVGFAHTSSRVKI 1787
G Y C Y ++ S +++
Sbjct: 78 GPYRCIYYKPPKWSEQSDYLEL 99
>1xau_A B- and T-lymphocyte attenuator; IG domain, beta sandwich,
structural genomics, PSI, protein structure initiative;
1.80A {Mus musculus} SCOP: b.1.1.4
Length = 122
Score = 37.5 bits (86), Expect = 0.009
Identities = 17/84 (20%), Positives = 29/84 (34%), Gaps = 9/84 (10%)
Query: 102 VPLGKLLTLQCEAT-GTPVPKCRWLR----NGREISSGARYRV----ETAGGVFRLHFNE 152
G+L ++C P W + + G + + VF LHF
Sbjct: 26 AWTGELFKIECPVKYCVHRPNVTWCKHNGTIWVPLEVGPQLYTSWEENRSVPVFVLHFKP 85
Query: 153 VTDVDNGDYTCEAYNSVGFAHTSS 176
+ DNG Y+C + ++ S
Sbjct: 86 IHLSDNGSYSCSTNFNSQVINSHS 109
Score = 37.5 bits (86), Expect = 0.009
Identities = 17/84 (20%), Positives = 29/84 (34%), Gaps = 9/84 (10%)
Query: 1709 VPLGKLLTLQCEAT-GTPVPKCRWLR----NGREISSGARYRV----ETAGGVFRLHFNE 1759
G+L ++C P W + + G + + VF LHF
Sbjct: 26 AWTGELFKIECPVKYCVHRPNVTWCKHNGTIWVPLEVGPQLYTSWEENRSVPVFVLHFKP 85
Query: 1760 VTDVDNGDYTCEAYNSVGFAHTSS 1783
+ DNG Y+C + ++ S
Sbjct: 86 IHLSDNGSYSCSTNFNSQVINSHS 109
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A
{Mycobacterium tuberculosis}
Length = 309
Score = 39.2 bits (92), Expect = 0.011
Identities = 15/77 (19%), Positives = 31/77 (40%), Gaps = 3/77 (3%)
Query: 817 SVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELI---RKEIDIMNQ 873
+ + Y + +G G G V+ + I A K + + + + ++E +
Sbjct: 31 TQFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGR 90
Query: 874 LHHPKLINLHDAFEDDD 890
L P ++ +HD E D
Sbjct: 91 LQEPHVVPIHDFGEIDG 107
>2aw2_A B and T lymphocyte attenuator; IGI domain, IGG domain, TNFRSF,
protein-protein complex, IMM system; HET: NAG FUL; 2.80A
{Homo sapiens} SCOP: b.1.1.1
Length = 120
Score = 37.1 bits (85), Expect = 0.012
Identities = 19/81 (23%), Positives = 23/81 (28%), Gaps = 6/81 (7%)
Query: 102 VPLGKLLTLQCEAT-GTPVPKCRWLRNGREISSGARYRV-----ETAGGVFRLHFNEVTD 155
+ G L+C P W + R E F LHF V
Sbjct: 23 ILAGDPFELECPVKYCANRPHVTWCKLNGTTCVKLEDRQTSWKEEKNISFFILHFEPVLP 82
Query: 156 VDNGDYTCEAYNSVGFAHTSS 176
DNG Y C A + S
Sbjct: 83 NDNGSYRCSANFQSNLIESHS 103
Score = 37.1 bits (85), Expect = 0.012
Identities = 19/81 (23%), Positives = 23/81 (28%), Gaps = 6/81 (7%)
Query: 1709 VPLGKLLTLQCEAT-GTPVPKCRWLRNGREISSGARYRV-----ETAGGVFRLHFNEVTD 1762
+ G L+C P W + R E F LHF V
Sbjct: 23 ILAGDPFELECPVKYCANRPHVTWCKLNGTTCVKLEDRQTSWKEEKNISFFILHFEPVLP 82
Query: 1763 VDNGDYTCEAYNSVGFAHTSS 1783
DNG Y C A + S
Sbjct: 83 NDNGSYRCSANFQSNLIESHS 103
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor,
two-domain structure, V-SET, C2-SET, IG-like domain,
6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens}
PDB: 2zg3_A* 2zg2_A
Length = 214
Score = 38.3 bits (88), Expect = 0.013
Identities = 17/114 (14%), Positives = 33/114 (28%), Gaps = 13/114 (11%)
Query: 1477 NSASLVVKNSQRSDGGQYRLQLKN--PAGFDTATLHSRLRTLPDSVNPRCHLPSSTSKER 1534
+ SL + +++ D G Y +++ + L P H R
Sbjct: 80 KNCSLSIGDARMEDTGSYFFRVERGRDVKYSYQQNKLNLEVTALIEKPDIHFLEPLESGR 139
Query: 1535 P---------KFPTHPNHQPWLKWARASLTSKGVDSTEDSISLVWSKPRHDGGS 1579
P P W +L+ ++T S + +P G +
Sbjct: 140 PTRLSCSLPGSCEAGP--PLTFSWTGNALSPLDPETTRSSELTLTPRPEDHGTN 191
Score = 37.1 bits (85), Expect = 0.033
Identities = 21/177 (11%), Positives = 42/177 (23%), Gaps = 15/177 (8%)
Query: 500 FQCTITGCPKPTISWLKGSREITPSARHHIFAEGD----TYTLIINSVYGVDADEYVCRA 555
F+ ++ R + P + GD +L I D Y R
Sbjct: 42 FRDGEIPYYAEVVATNNPDRRVKPETQGRFRLLGDVQKKNCSLSIGDARMEDTGSYFFRV 101
Query: 556 VNKGGVK-STKAELIIMTAPKFNVPPRFRDTAYFDKGENV----VVKIPFTGYPKPKITW 610
VK S + + + P + G + P +W
Sbjct: 102 ERGRDVKYSYQQNKLNLEVTALIEKPDIHFLEPLESGRPTRLSCSLPGSCEAGPPLTFSW 161
Query: 611 YRDNEVIESGGHFHVETSERHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQIS 667
+ + R + LT+ + + +Q++
Sbjct: 162 TGNALSPLDP------ETTRSSELTLTPRPEDHGTNLTCQMKRQGAQVTTERTVQLN 212
Score = 34.8 bits (79), Expect = 0.23
Identities = 17/169 (10%), Positives = 42/169 (24%), Gaps = 17/169 (10%)
Query: 114 ATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAH 173
AT P + + GR R + L + D G Y +
Sbjct: 55 ATNNPDRRVKPETQGR-----FRLLGDVQKKNCSLSIGDARMEDTGSYFFRVERGRDVKY 109
Query: 174 T------SSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSD 227
+ + V L + + + ++ + G +
Sbjct: 110 SYQQNKLNLEVTALIEKPDIHFLEPLESGRPTRLSCSLPGSCEAGPPLTFSWTGNALSPL 169
Query: 228 DRFKFTVLDDYIIIFIKEIRKEDAGDYT--VNLSNSSGSVSGTFTINIT 274
D + + ++ + T + + + T +N++
Sbjct: 170 DPETTRSS----ELTLTPRPEDHGTNLTCQMKRQGAQVTTERTVQLNVS 214
Score = 34.8 bits (79), Expect = 0.23
Identities = 17/169 (10%), Positives = 42/169 (24%), Gaps = 17/169 (10%)
Query: 1721 ATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAH 1780
AT P + + GR R + L + D G Y +
Sbjct: 55 ATNNPDRRVKPETQGR-----FRLLGDVQKKNCSLSIGDARMEDTGSYFFRVERGRDVKY 109
Query: 1781 T------SSRVKIGTPPRIDRMPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSD 1834
+ + V L + + + ++ + G +
Sbjct: 110 SYQQNKLNLEVTALIEKPDIHFLEPLESGRPTRLSCSLPGSCEAGPPLTFSWTGNALSPL 169
Query: 1835 DRFKFTVLDDYIIIFIKEIRKEDAGDYT--VNLSNSSGSVSGTFTINIT 1881
D + + ++ + T + + + T +N++
Sbjct: 170 DPETTRSS----ELTLTPRPEDHGTNLTCQMKRQGAQVTTERTVQLNVS 214
Score = 32.9 bits (74), Expect = 0.74
Identities = 17/126 (13%), Positives = 34/126 (26%), Gaps = 16/126 (12%)
Query: 2054 QYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTIT- 2112
Y FRV + S N + ++ + P+I + C++
Sbjct: 96 SYFFRVERGRDVKYSY---QQNKLNLEVTALIEKPDIHFL---EPLESGRPTRLSCSLPG 149
Query: 2113 ---GCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVK 2169
P T SW + + L + C+ +G
Sbjct: 150 SCEAGPPLTFSWTGNALSPLDPETTR------SSELTLTPRPEDHGTNLTCQMKRQGAQV 203
Query: 2170 STKAEL 2175
+T+ +
Sbjct: 204 TTERTV 209
Score = 31.0 bits (69), Expect = 3.2
Identities = 33/199 (16%), Positives = 52/199 (26%), Gaps = 23/199 (11%)
Query: 1597 IKASMAHIPDTSLKYVLWVSEGKSIGSE----RGSTAQFLEREVGGAIWLKCNDYNVLEC 1652
+ YV W +G+ + + ++ E G L D C
Sbjct: 24 FSYPWRSWYSSPPLYVYWFRDGEIPYYAEVVATNNPDRRVKPETQGRFRLL-GDVQKKNC 82
Query: 1653 SFSVLNLVEGND--YEFRIIAVNAIGKSEPSICTTPVKICEFVGGEKPDFIVPLKDLVVP 1710
S S+ + + Y FR V + S + + EKPD +
Sbjct: 83 SLSIGDARMEDTGSYFFR---VERGRDVKYSYQQNKLNLEVTALIEKPDIHFLEP---LE 136
Query: 1711 LGKLLTLQCEATGT----PVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNG 1766
G+ L C G+ P W N R L +
Sbjct: 137 SGRPTRLSCSLPGSCEAGPPLTFSWTGNALSPLDPETTRSSE------LTLTPRPEDHGT 190
Query: 1767 DYTCEAYNSVGFAHTSSRV 1785
+ TC+ T V
Sbjct: 191 NLTCQMKRQGAQVTTERTV 209
Score = 31.0 bits (69), Expect = 4.1
Identities = 25/141 (17%), Positives = 37/141 (26%), Gaps = 18/141 (12%)
Query: 44 ECSFSVLNLVEGND--YEFRIIAVNAIGKSEPSICTTPVKICEFVGGEKPDFIVPLKDLV 101
CS S+ + + Y FR V + S + + EKPD
Sbjct: 81 NCSLSIGDARMEDTGSYFFR---VERGRDVKYSYQQNKLNLEVTALIEKPDIHFLEP--- 134
Query: 102 VPLGKLLTLQCEATGT----PVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVD 157
+ G+ L C G+ P W N R L +
Sbjct: 135 LESGRPTRLSCSLPGSCEAGPPLTFSWTGNALSPLDPETTRSSE------LTLTPRPEDH 188
Query: 158 NGDYTCEAYNSVGFAHTSSRV 178
+ TC+ T V
Sbjct: 189 GTNLTCQMKRQGAQVTTERTV 209
Score = 30.2 bits (67), Expect = 6.5
Identities = 24/195 (12%), Positives = 46/195 (23%), Gaps = 17/195 (8%)
Query: 1329 FTVPDPPG---QPQIVDWDTNNATLMWDRPRTDGGSKIQG-------YKMLLKTPTGELP 1378
F+ P P V W + + + +++L
Sbjct: 24 FSYPWRSWYSSPPLYVYWFRDGEIPYYAEVVATNNPDRRVKPETQGRFRLLGDVQKKNCS 83
Query: 1379 TTIWSKIRPTSSTVYCKDTTMNSSNSEPGKQSGPVIVEEQPNKPVMDLSGVRDITVKAGE 1438
+I + + + + + + V KP + +
Sbjct: 84 LSIGDARMEDTGSYFFRVERGRDVKYSYQQNKLNLEVTALIEKPDIHFLEPLESGRPTRL 143
Query: 1439 DFSIHVPFMAFPQPAAFWFANDSIIDDSDTRVHKQLTMNSASLVVKNSQRSDGGQYRLQL 1498
S+ A P W N D +T +LT+ G Q+
Sbjct: 144 SCSLPGSCEAGPPLTFSWTGNALSPLDPETTRSSELTLT-------PRPEDHGTNLTCQM 196
Query: 1499 KNPAGFDTATLHSRL 1513
K T +L
Sbjct: 197 KRQGAQVTTERTVQL 211
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis,
nucleotide-binding, inhibitor, phosphorylation receptor,
transferase, transmembrane; HET: 00J; 1.50A {Homo
sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A*
3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A*
2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A*
3cpc_A* ...
Length = 316
Score = 38.8 bits (91), Expect = 0.014
Identities = 20/85 (23%), Positives = 36/85 (42%), Gaps = 14/85 (16%)
Query: 824 ILEEIGTGAFGVVHRCRERKTGNIFAAKFIPV---------SHNLEKELIRKEIDIMNQL 874
+ + +G GAFG V G A V +H+ + L+ E+ I+ +
Sbjct: 31 LGKPLGRGAFGQVIEA--DAFGIDKTATCRTVAVKMLKEGATHSEHRALMS-ELKILIHI 87
Query: 875 -HHPKLINLHDA-FEDDDEMVLIFE 897
HH ++NL A + +++I E
Sbjct: 88 GHHLNVVNLLGACTKPGGPLMVIVE 112
>4ety_A LAIR-1, mlair1, leukocyte-associated immunoglobulin-like receptor;
IG-like domain, extra celluar domain, domain swappin
nysgrc, structural genomics; 1.90A {Mus musculus}
Length = 118
Score = 36.6 bits (85), Expect = 0.017
Identities = 12/91 (13%), Positives = 31/91 (34%), Gaps = 2/91 (2%)
Query: 101 VVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGD 160
++ G +T+ C + +R ++ S+ E V + G
Sbjct: 19 MISQGTFVTVVCSYS-DKHDLYNMVRLEKDGSTFMEKSTEPYKTEDEFEIGPVNETITGH 77
Query: 161 YTCEAYNSVGFAHTSSRVKI-GTPPRIDRMP 190
Y+C + ++ S +++ + + P
Sbjct: 78 YSCIYSKGITWSERSKTLELKVIKENVIQTP 108
Score = 36.6 bits (85), Expect = 0.017
Identities = 12/91 (13%), Positives = 31/91 (34%), Gaps = 2/91 (2%)
Query: 1708 VVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGD 1767
++ G +T+ C + +R ++ S+ E V + G
Sbjct: 19 MISQGTFVTVVCSYS-DKHDLYNMVRLEKDGSTFMEKSTEPYKTEDEFEIGPVNETITGH 77
Query: 1768 YTCEAYNSVGFAHTSSRVKI-GTPPRIDRMP 1797
Y+C + ++ S +++ + + P
Sbjct: 78 YSCIYSKGITWSERSKTLELKVIKENVIQTP 108
>4esk_A LAIR-1, mlair1, leukocyte-associated immunoglobulin-like receptor;
IG-like domain, domain swapping, collagen receptor,
structural genomics; 1.76A {Mus musculus}
Length = 102
Score = 36.2 bits (84), Expect = 0.018
Identities = 11/80 (13%), Positives = 28/80 (35%), Gaps = 1/80 (1%)
Query: 101 VVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGD 160
++ G +T+ C + +R ++ S+ E V + G
Sbjct: 19 MISQGTFVTVVCSYS-DKHDLYNMVRLEKDGSTFMEKSTEPYKTEDEFEIGPVNETITGH 77
Query: 161 YTCEAYNSVGFAHTSSRVKI 180
Y+C + ++ S +++
Sbjct: 78 YSCIYSKGITWSERSKTLEL 97
Score = 36.2 bits (84), Expect = 0.018
Identities = 11/80 (13%), Positives = 28/80 (35%), Gaps = 1/80 (1%)
Query: 1708 VVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGD 1767
++ G +T+ C + +R ++ S+ E V + G
Sbjct: 19 MISQGTFVTVVCSYS-DKHDLYNMVRLEKDGSTFMEKSTEPYKTEDEFEIGPVNETITGH 77
Query: 1768 YTCEAYNSVGFAHTSSRVKI 1787
Y+C + ++ S +++
Sbjct: 78 YSCIYSKGITWSERSKTLEL 97
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase,
transferase, ATP- binding, phosphorylation,
nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB:
2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Length = 330
Score = 38.5 bits (90), Expect = 0.018
Identities = 15/83 (18%), Positives = 28/83 (33%), Gaps = 3/83 (3%)
Query: 818 VYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQLHHP 877
V ++ + ++IG G FG + + T A K + E QL
Sbjct: 7 VGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKL--EPMKSRAPQLHLEYRFYKQLGSG 64
Query: 878 KLI-NLHDAFEDDDEMVLIFEVL 899
I ++ ++ E+L
Sbjct: 65 DGIPQVYYFGPCGKYNAMVLELL 87
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex,
layered beta- sheets, transferas; HET: SEP TPO; 3.20A
{Solanum pimpinellifolium} PDB: 3hgk_A*
Length = 321
Score = 38.3 bits (90), Expect = 0.025
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 828 IGTGAFGVVHRCRERKTGNIFAAK-FIPVSHNLEKELIRKEIDIMNQLHHPKLINLHDAF 886
IG G FG V++ + G A K P S +E EI+ ++ HP L++L
Sbjct: 47 IGHGVFGKVYKGV-LRDGAKVALKRRTPESSQGIEEF-ETEIETLSFCRHPHLVSLIGFC 104
Query: 887 EDDDEMVLIFE 897
++ +EM+LI++
Sbjct: 105 DERNEMILIYK 115
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain,
kinase, transferase-transferase inhibitor COM; HET: 42Q;
1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A*
3hng_A*
Length = 359
Score = 38.4 bits (89), Expect = 0.026
Identities = 20/94 (21%), Positives = 36/94 (38%), Gaps = 8/94 (8%)
Query: 824 ILEEIGTGAFGVVHRCR-----ERKTGNIFAAKFIPVSHNL-EKELIRKEIDIMNQL-HH 876
+ + +G GAFG V + T A K + E + E+ I+ + HH
Sbjct: 26 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 85
Query: 877 PKLINLHDA-FEDDDEMVLIFEVLDRPHPPENLH 909
++NL A + +++I E + L
Sbjct: 86 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR 119
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural
genomics, structural genomics consortium, ATP-binding,
disease mutation; HET: ADP; 2.35A {Homo sapiens}
Length = 336
Score = 37.9 bits (88), Expect = 0.028
Identities = 14/65 (21%), Positives = 25/65 (38%), Gaps = 5/65 (7%)
Query: 819 YDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIR-KEIDIMNQLHHP 877
D+ +LE IG G +G V++ A K ++ + I K I + + H
Sbjct: 12 LDNLKLLELIGRGRYGAVYKGSLD--ERPVAVKVFSFAN--RQNFINEKNIYRVPLMEHD 67
Query: 878 KLINL 882
+
Sbjct: 68 NIARF 72
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus
subsp}
Length = 294
Score = 36.8 bits (86), Expect = 0.066
Identities = 17/72 (23%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Query: 822 YDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRK---EIDIMNQLHHPK 878
Y I++++G G V+ + A K I + ++E +++ E+ +QL H
Sbjct: 13 YKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQN 72
Query: 879 LINLHDAFEDDD 890
++++ D E+DD
Sbjct: 73 IVSMIDVDEEDD 84
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase,
alternative splicing, ATP-binding, chromosome partition,
differentiation, mRNA processing; 1.73A {Homo sapiens}
PDB: 1wbp_A* 3beg_A* 2x7g_A*
Length = 397
Score = 36.8 bits (85), Expect = 0.076
Identities = 23/123 (18%), Positives = 48/123 (39%), Gaps = 22/123 (17%)
Query: 789 DEKVSDYDQYVFDIYSKYVPQPVDIKTSSVYDHYDILEEIGTGAFGVVHRCRERKTGNIF 848
E +DY + + ++ + D+ Y ++ ++G G F V + +
Sbjct: 15 QEDPNDYCKGGY-----HLVKIGDL----FNGRYHVIRKLGWGHFSTVWLSWDIQGKKFV 65
Query: 849 AAKFIPVSHNLEKELIRKEIDIMNQL-----HHP---KLINLHDAFE----DDDEMVLIF 896
A K + S E EI ++ + + P ++ L D F+ + + ++F
Sbjct: 66 AMK-VVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVF 124
Query: 897 EVL 899
EVL
Sbjct: 125 EVL 127
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK,
transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB:
2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Length = 307
Score = 36.4 bits (85), Expect = 0.078
Identities = 18/75 (24%), Positives = 33/75 (44%), Gaps = 8/75 (10%)
Query: 828 IGTGAFGVVHRCRERKTGNIFAAK-----FIPVSHNLEKELIRKEIDIMNQLHHPKLINL 882
+G G FGVV++ A K + L+++ + EI +M + H L+ L
Sbjct: 39 MGEGGFGVVYKGYVN--NTTVAVKKLAAMVDITTEELKQQFDQ-EIKVMAKCQHENLVEL 95
Query: 883 HDAFEDDDEMVLIFE 897
D D++ L++
Sbjct: 96 LGFSSDGDDLCLVYV 110
>1eaj_A Coxsackie virus and adenovirus receptor; virus/viral protein
receptor, immunoglobulin V domain fold, symmetric dimer;
1.35A {Homo sapiens} SCOP: b.1.1.1 PDB: 1f5w_A 2j12_B
2j1k_A 2wbw_B* 2w9l_A* 1rsf_A 1jew_R 1kac_B 1p69_B 1p6a_B
Length = 126
Score = 34.5 bits (79), Expect = 0.092
Identities = 13/41 (31%), Positives = 18/41 (43%)
Query: 1470 VHKQLTMNSASLVVKNSQRSDGGQYRLQLKNPAGFDTATLH 1510
L AS+ V N Q SD G Y+ ++K G +H
Sbjct: 80 TSNDLKSGDASINVTNLQLSDIGTYQCKVKKAPGVANKKIH 120
>2or8_A Hepatitis A virus cellular receptor 1 homolog; beta barrel,
immunoglobulin fold, IGV domain, TIM, immune system;
2.50A {Mus musculus}
Length = 116
Score = 34.1 bits (78), Expect = 0.11
Identities = 17/71 (23%), Positives = 31/71 (43%), Gaps = 3/71 (4%)
Query: 1455 FWFANDSIIDDSDTRVH--KQLTMNSASLVVKNSQRSDGGQYRLQLKNPAGFDTATLHSR 1512
W + +R + ++ SL ++NS SD G Y +++ P F+ +
Sbjct: 47 IWTNGHRVTYQKSSRYNLKGHISEGDVSLTIENSVESDSGLYCCRVEIPGWFNDQKVTFS 106
Query: 1513 LRTLPDSVNPR 1523
L+ P+ V PR
Sbjct: 107 LQVKPELV-PR 116
>2pnd_A V-SET and immunoglobulin domain containing 4; complement receptor,
IG-like domain, immune system; 1.00A {Mus musculus} PDB:
2icc_A 2ice_S* 2icf_S*
Length = 119
Score = 34.1 bits (78), Expect = 0.13
Identities = 19/104 (18%), Positives = 29/104 (27%), Gaps = 21/104 (20%)
Query: 98 KDLVVPLGKLLTLQC---EATGTPVPKCRWLR-------------NGREISSGARYR--- 138
+ + + +QC G +WL + + A+YR
Sbjct: 9 ESVTGTWKGDVKIQCIYDPLRGYRQVLVKWLVRHGSDSVTIFLRDSTGDHIQQAKYRGRL 68
Query: 139 --VETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKI 180
G L N + D YTCE + R KI
Sbjct: 69 KVSHKVPGDVSLQINTLQMDDRNHYTCEVTWQTPDGNQVIRDKI 112
Score = 34.1 bits (78), Expect = 0.13
Identities = 19/104 (18%), Positives = 29/104 (27%), Gaps = 21/104 (20%)
Query: 1705 KDLVVPLGKLLTLQC---EATGTPVPKCRWLR-------------NGREISSGARYR--- 1745
+ + + +QC G +WL + + A+YR
Sbjct: 9 ESVTGTWKGDVKIQCIYDPLRGYRQVLVKWLVRHGSDSVTIFLRDSTGDHIQQAKYRGRL 68
Query: 1746 --VETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKI 1787
G L N + D YTCE + R KI
Sbjct: 69 KVSHKVPGDVSLQINTLQMDDRNHYTCEVTWQTPDGNQVIRDKI 112
>3pv7_A B7-H6, IG-like domain-containing protein
DKFZP686O24166/DKFZP686I21167; NK cell receptor,
receptor-ligand complex, immune system; HET: NAG; 2.00A
{Homo sapiens} PDB: 3pv6_A*
Length = 248
Score = 35.4 bits (81), Expect = 0.17
Identities = 26/223 (11%), Positives = 60/223 (26%), Gaps = 41/223 (18%)
Query: 99 DLVVPLGKLLTLQCEATGTPVP-----KCRWLR-----------------NGREISSGAR 136
+ PL +T+ C + W + GA
Sbjct: 12 TQITPLNDNVTIFCNIFYSQPLNITSMGITWFWKSLTFDKEVKVFEFFGDHQEAFRPGAI 71
Query: 137 YRVETAG-GVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMPNALYI 195
G L + + G+Y CE + A + ++++ P + + + +
Sbjct: 72 VSPWRLKSGDASLRLPGIQLEEAGEYRCEVVVTPLKAQGTVQLEVVASPASRLLLDQVGM 131
Query: 196 PEGDNT---KVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAG 252
E ++ + FY + ++ K + V+ K G
Sbjct: 132 KENEDKYMCESSGFYPEA--INITWEKQTQKFPHPIEISEDVITG-------PTIKNMDG 182
Query: 253 DY----TVNLSNSSGSVSGTFTINIT--GLPGPPIGPLDVSEI 289
+ + L++S + + L P ++
Sbjct: 183 TFNVTSCLKLNSSQEDPGTVYQCVVRHASLHTPLRSNFTLTAA 225
Score = 35.4 bits (81), Expect = 0.17
Identities = 26/223 (11%), Positives = 60/223 (26%), Gaps = 41/223 (18%)
Query: 1706 DLVVPLGKLLTLQCEATGTPVP-----KCRWLR-----------------NGREISSGAR 1743
+ PL +T+ C + W + GA
Sbjct: 12 TQITPLNDNVTIFCNIFYSQPLNITSMGITWFWKSLTFDKEVKVFEFFGDHQEAFRPGAI 71
Query: 1744 YRVETAG-GVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMPNALYI 1802
G L + + G+Y CE + A + ++++ P + + + +
Sbjct: 72 VSPWRLKSGDASLRLPGIQLEEAGEYRCEVVVTPLKAQGTVQLEVVASPASRLLLDQVGM 131
Query: 1803 PEGDNT---KVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAG 1859
E ++ + FY + ++ K + V+ K G
Sbjct: 132 KENEDKYMCESSGFYPEA--INITWEKQTQKFPHPIEISEDVITG-------PTIKNMDG 182
Query: 1860 DY----TVNLSNSSGSVSGTFTINIT--GLPGPPIGPLDVSEI 1896
+ + L++S + + L P ++
Sbjct: 183 TFNVTSCLKLNSSQEDPGTVYQCVVRHASLHTPLRSNFTLTAA 225
Score = 32.7 bits (74), Expect = 1.2
Identities = 17/97 (17%), Positives = 32/97 (32%), Gaps = 6/97 (6%)
Query: 536 YTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENVV 595
+L + + +A EY C V +L ++ +P + D + E+
Sbjct: 82 ASLRLPGIQLEEAGEYRCEVVVTPLKAQGTVQLEVVASPASRLLL---DQVGMKENEDKY 138
Query: 596 VKIPFTGYPKP-KITWYRDNEVIESGGHFH--VETSE 629
+ YP+ ITW + + V T
Sbjct: 139 MCESSGFYPEAINITWEKQTQKFPHPIEISEDVITGP 175
>2edo_A CD48 antigen; beta-sandwich, IG-fold, B-lymphocyte activation
marker blast-1, BCM1 surface antigen, leukocyte antigen
MEM-102, TCT.1; NMR {Homo sapiens}
Length = 121
Score = 33.4 bits (76), Expect = 0.23
Identities = 15/94 (15%), Positives = 24/94 (25%), Gaps = 13/94 (13%)
Query: 96 PLKDLVVPLGKLLTLQCEATGT-PVPKCRWLRNGRE------------ISSGARYRVETA 142
L + V G +TL + + W + S + RV
Sbjct: 10 HLVHMTVVSGSNVTLNISESLPENYKQLTWFYTFDQKIVEWDSRKSKYFESKFKGRVRLD 69
Query: 143 GGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSS 176
L+ ++V DN Y G
Sbjct: 70 PQSGALYISKVQKEDNSTYIMRVLKKTGNEQEWK 103
Score = 33.4 bits (76), Expect = 0.23
Identities = 15/94 (15%), Positives = 24/94 (25%), Gaps = 13/94 (13%)
Query: 1703 PLKDLVVPLGKLLTLQCEATGT-PVPKCRWLRNGRE------------ISSGARYRVETA 1749
L + V G +TL + + W + S + RV
Sbjct: 10 HLVHMTVVSGSNVTLNISESLPENYKQLTWFYTFDQKIVEWDSRKSKYFESKFKGRVRLD 69
Query: 1750 GGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSS 1783
L+ ++V DN Y G
Sbjct: 70 PQSGALYISKVQKEDNSTYIMRVLKKTGNEQEWK 103
Score = 30.7 bits (69), Expect = 2.2
Identities = 7/32 (21%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Query: 243 IKEIRKEDAGDYTVNLSNSSGSVSGTFTINIT 274
I +++KED Y + + +G+ + I +
Sbjct: 77 ISKVQKEDNSTYIMRVLKKTGNEQ-EWKIKLQ 107
Score = 30.7 bits (69), Expect = 2.2
Identities = 7/32 (21%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Query: 1850 IKEIRKEDAGDYTVNLSNSSGSVSGTFTINIT 1881
I +++KED Y + + +G+ + I +
Sbjct: 77 ISKVQKEDNSTYIMRVLKKTGNEQ-EWKIKLQ 107
Score = 29.1 bits (65), Expect = 7.2
Identities = 11/93 (11%), Positives = 26/93 (27%), Gaps = 13/93 (13%)
Query: 486 PLRNANAIQNHNAQFQCTITGCPKPT-ISWLKGSRE------------ITPSARHHIFAE 532
L + + N + + ++W + + + +
Sbjct: 10 HLVHMTVVSGSNVTLNISESLPENYKQLTWFYTFDQKIVEWDSRKSKYFESKFKGRVRLD 69
Query: 533 GDTYTLIINSVYGVDADEYVCRAVNKGGVKSTK 565
+ L I+ V D Y+ R + K G +
Sbjct: 70 PQSGALYISKVQKEDNSTYIMRVLKKTGNEQEW 102
Score = 29.1 bits (65), Expect = 7.2
Identities = 11/93 (11%), Positives = 26/93 (27%), Gaps = 13/93 (13%)
Query: 2093 PLRNANAIQNHNAQFQCTITGCPKPT-ISWLKGSRE------------ITPSARHHIFAE 2139
L + + N + + ++W + + + +
Sbjct: 10 HLVHMTVVSGSNVTLNISESLPENYKQLTWFYTFDQKIVEWDSRKSKYFESKFKGRVRLD 69
Query: 2140 GDTYTLIINSVYGVDADEYVCRAVNKGGVKSTK 2172
+ L I+ V D Y+ R + K G +
Sbjct: 70 PQSGALYISKVQKEDNSTYIMRVLKKTGNEQEW 102
>1sq2_N Novel antigen receptor; immunoglobulin fold, protein-protein
complex, hydrolase/immune system complex; 1.45A
{Ginglymostoma cirratum} SCOP: b.1.1.1 PDB: 1t6v_N
Length = 113
Score = 33.1 bits (76), Expect = 0.23
Identities = 23/83 (27%), Positives = 31/83 (37%), Gaps = 10/83 (12%)
Query: 98 KDLVVPLGKLLTLQCEATGTPVPKC--RWLR----NGRE--ISSGARYR--VETAGGVFR 147
+ + G+ LT+ C W R G E IS G RY V + F
Sbjct: 8 RSVTKETGESLTINCVLRDASYALGSTCWYRKKSGEGNEESISKGGRYVETVNSGSKSFS 67
Query: 148 LHFNEVTDVDNGDYTCEAYNSVG 170
L N++T D G Y C + G
Sbjct: 68 LRINDLTVEDGGTYRCGLGVAGG 90
Score = 33.1 bits (76), Expect = 0.23
Identities = 23/83 (27%), Positives = 31/83 (37%), Gaps = 10/83 (12%)
Query: 1705 KDLVVPLGKLLTLQCEATGTPVPKC--RWLR----NGRE--ISSGARYR--VETAGGVFR 1754
+ + G+ LT+ C W R G E IS G RY V + F
Sbjct: 8 RSVTKETGESLTINCVLRDASYALGSTCWYRKKSGEGNEESISKGGRYVETVNSGSKSFS 67
Query: 1755 LHFNEVTDVDNGDYTCEAYNSVG 1777
L N++T D G Y C + G
Sbjct: 68 LRINDLTVEDGGTYRCGLGVAGG 90
Score = 30.4 bits (69), Expect = 2.4
Identities = 15/56 (26%), Positives = 20/56 (35%), Gaps = 8/56 (14%)
Query: 601 TGYPKPKITWYR------DNEVIESGGHF--HVETSERHAILTIRDASNVDTAPYR 648
Y WYR + E I GG + V + + L I D + D YR
Sbjct: 27 ASYALGSTCWYRKKSGEGNEESISKGGRYVETVNSGSKSFSLRINDLTVEDGGTYR 82
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding,
membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Length = 345
Score = 35.1 bits (81), Expect = 0.26
Identities = 10/69 (14%), Positives = 25/69 (36%), Gaps = 1/69 (1%)
Query: 813 IKTSSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMN 872
+ + + + ++IG+G FG+++ A + V + L E+
Sbjct: 30 VLDDMEGNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFS-ELKFYQ 88
Query: 873 QLHHPKLIN 881
++ I
Sbjct: 89 RVAKKDCIK 97
>1neu_A Myelin P0 protein; structural protein, glycoprotein, transmembrane,
phosphorylation, immunoglobulin fold, signal; 1.90A
{Rattus norvegicus} SCOP: b.1.1.1
Length = 124
Score = 33.0 bits (75), Expect = 0.34
Identities = 16/112 (14%), Positives = 35/112 (31%), Gaps = 26/112 (23%)
Query: 94 IVPLKDLVVPLGKLLTLQC--------------------EATGTPVPKCRWLRNGREISS 133
+ +++ +G +TL C E + + + I
Sbjct: 3 VYTDREVYGAVGSQVTLHCSFWSSEWVSDDISFTWRYQPEGGRDAISIFHYAKGQPYIDE 62
Query: 134 GARY--RVETAGGVFR----LHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVK 179
+ R++ G + + + DNG +TC+ N +S+V
Sbjct: 63 VGTFKERIQWVGDPSWKDGSIVIHNLDYSDNGTFTCDVKNPPDIVGKTSQVT 114
Score = 33.0 bits (75), Expect = 0.34
Identities = 16/112 (14%), Positives = 35/112 (31%), Gaps = 26/112 (23%)
Query: 1701 IVPLKDLVVPLGKLLTLQC--------------------EATGTPVPKCRWLRNGREISS 1740
+ +++ +G +TL C E + + + I
Sbjct: 3 VYTDREVYGAVGSQVTLHCSFWSSEWVSDDISFTWRYQPEGGRDAISIFHYAKGQPYIDE 62
Query: 1741 GARY--RVETAGGVFR----LHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVK 1786
+ R++ G + + + DNG +TC+ N +S+V
Sbjct: 63 VGTFKERIQWVGDPSWKDGSIVIHNLDYSDNGTFTCDVKNPPDIVGKTSQVT 114
Score = 30.7 bits (69), Expect = 1.9
Identities = 12/51 (23%), Positives = 18/51 (35%), Gaps = 2/51 (3%)
Query: 1469 RVH--KQLTMNSASLVVKNSQRSDGGQYRLQLKNPAGFDTATLHSRLRTLP 1517
R+ + S+V+ N SD G + +KNP T L
Sbjct: 69 RIQWVGDPSWKDGSIVIHNLDYSDNGTFTCDVKNPPDIVGKTSQVTLYVFE 119
Score = 29.6 bits (66), Expect = 5.7
Identities = 18/89 (20%), Positives = 31/89 (34%), Gaps = 7/89 (7%)
Query: 194 YIPEGDNTKVKIFYA--GDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDA 251
Y PEG + IF+ G ++ T R+ ++ I I + D
Sbjct: 39 YQPEGGRDAISIFHYAKGQPYIDEVGTFKERI-----QWVGDPSWKDGSIVIHNLDYSDN 93
Query: 252 GDYTVNLSNSSGSVSGTFTINITGLPGPP 280
G +T ++ N V T + + P
Sbjct: 94 GTFTCDVKNPPDIVGKTSQVTLYVFEKVP 122
Score = 29.6 bits (66), Expect = 5.7
Identities = 18/89 (20%), Positives = 31/89 (34%), Gaps = 7/89 (7%)
Query: 1801 YIPEGDNTKVKIFYA--GDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDA 1858
Y PEG + IF+ G ++ T R+ ++ I I + D
Sbjct: 39 YQPEGGRDAISIFHYAKGQPYIDEVGTFKERI-----QWVGDPSWKDGSIVIHNLDYSDN 93
Query: 1859 GDYTVNLSNSSGSVSGTFTINITGLPGPP 1887
G +T ++ N V T + + P
Sbjct: 94 GTFTCDVKNPPDIVGKTSQVTLYVFEKVP 122
>1pko_A Myelin oligodendrocyte glycoprotein; IGV-domain, immune system;
1.45A {Rattus norvegicus} SCOP: b.1.1.1 PDB: 1pkq_E
3csp_A 1py9_A
Length = 139
Score = 33.0 bits (75), Expect = 0.43
Identities = 22/116 (18%), Positives = 32/116 (27%), Gaps = 23/116 (19%)
Query: 94 IVPLKDLVVPLGKLLTLQC---EATGTPVPKCRWLR-----------NGREI----SSGA 135
I P + +G L C + W R NG++ +
Sbjct: 10 IGPGHPIRALVGDEAELPCRISPGKNATGMEVGWYRSPFSRVVHLYRNGKDQDAEQAPEY 69
Query: 136 RYRVE-----TAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRI 186
R R E G L V D G YTC + + +K+ P
Sbjct: 70 RGRTELLKESIGEGKVALRIQNVRFSDEGGYTCFFRDHSYQEEAAVELKVEDPFYW 125
Score = 33.0 bits (75), Expect = 0.43
Identities = 22/116 (18%), Positives = 32/116 (27%), Gaps = 23/116 (19%)
Query: 1701 IVPLKDLVVPLGKLLTLQC---EATGTPVPKCRWLR-----------NGREI----SSGA 1742
I P + +G L C + W R NG++ +
Sbjct: 10 IGPGHPIRALVGDEAELPCRISPGKNATGMEVGWYRSPFSRVVHLYRNGKDQDAEQAPEY 69
Query: 1743 RYRVE-----TAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRI 1793
R R E G L V D G YTC + + +K+ P
Sbjct: 70 RGRTELLKESIGEGKVALRIQNVRFSDEGGYTCFFRDHSYQEEAAVELKVEDPFYW 125
Score = 32.2 bits (73), Expect = 0.78
Identities = 7/43 (16%), Positives = 19/43 (44%)
Query: 1468 TRVHKQLTMNSASLVVKNSQRSDGGQYRLQLKNPAGFDTATLH 1510
+ + + +L ++N + SD G Y ++ + + A +
Sbjct: 74 ELLKESIGEGKVALRIQNVRFSDEGGYTCFFRDHSYQEEAAVE 116
>1cid_A T cell surface glycoprotein CD4; 2.80A {Rattus norvegicus} SCOP:
b.1.1.1 b.1.1.3
Length = 177
Score = 33.6 bits (76), Expect = 0.45
Identities = 20/113 (17%), Positives = 33/113 (29%), Gaps = 5/113 (4%)
Query: 1171 TVNGDEVS---PDGRIKFETSENQTIYRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYV 1227
++ +VS KF+ SE + +GS + L G + V
Sbjct: 47 SLKNQKVSVQKSTSNPKFQLSETLPLTLQIPQVSLQFAGSGNLTLTLDRGILYQEVNLVV 106
Query: 1228 VDKPSPPQGPL--DVSDITPESCSLSWKPPLDDGGSPITNYVVEKYESATGFW 1278
+ P L +V T L K + V++ G W
Sbjct: 107 MKVTQPDSNTLTCEVMGPTSPKMRLILKQENQEARVSRQEKVIQVQAPEAGVW 159
>2vtf_A Endo-beta-N-acetylglucosaminidase; hydrolase, family 85,
glycosidase, carbohydrat binding; HET: B3P PGE; 1.79A
{Arthrobacter protophormiae} PDB: 3fhq_A* 3fha_A*
Length = 626
Score = 34.4 bits (78), Expect = 0.48
Identities = 18/115 (15%), Positives = 36/115 (31%), Gaps = 7/115 (6%)
Query: 647 YRVVAENDLGMDSAIVKIQISDRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIV 706
+ + I ++ + + P P V +D + +W+ SN+ +Y V
Sbjct: 509 FAAEGNETGLAEFYIGQLAVGADSEKPAAPNVNVRQYDPDPSGIQL-VWEKQSNVHHYRV 567
Query: 707 EKREHPMSSWIRVGNTRFTTMAITGLSP---GHQYEFRVYAENVYG-RSDPSTTS 757
K I G + + + GL + + A + SD
Sbjct: 568 YKETKHGKELI--GTSAGDRIYLEGLVEESKQNDVRLHIEALSETFVPSDARMID 620
>1fyh_B Interferon-gamma receptor alpha chain; cytokine-receptor complex,
fibronectin type-III, immune system; 2.04A {Homo sapiens}
SCOP: b.1.2.1 b.1.2.1 PDB: 1fg9_C 1jrh_I
Length = 229
Score = 33.6 bits (76), Expect = 0.62
Identities = 25/173 (14%), Positives = 47/173 (27%), Gaps = 32/173 (18%)
Query: 1250 LSWKPPLDDGGSPITNYVVE--KYESATGFWSKLSSFVRSPAYDVFGLETN--RQYRFRV 1305
+ W+ + + VE Y W + ++ + RV
Sbjct: 29 VYWEYQ---IMPQVPVFTVEVKNYGVKNSEWIDACINISHHYCNISDHVGDPSNSLWVRV 85
Query: 1306 RAENQYGVSEPLELDN-----------------------SITAKFPFTVPDPPGQPQIVD 1342
+A S + + I P + Q D
Sbjct: 86 KARVGQKESAYAKSEEFAVCRDGKIGPPKLDIRKEEKQIMIDIFHPSVFVNGDEQEVDYD 145
Query: 1343 WDTNNATLMWDRPRTDGGSKIQGYKMLLKTPTGELPTTIWSKIRPTS-STVYC 1394
+T +++ GS+IQ YK+L + I +S ++ YC
Sbjct: 146 PETTCYIRVYNVYVRMNGSEIQ-YKILTQKEDDCDEIQCQLAIPVSSLNSQYC 197
Score = 30.1 bits (67), Expect = 6.9
Identities = 29/225 (12%), Positives = 59/225 (26%), Gaps = 30/225 (13%)
Query: 904 PPENLHADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTKVSSYVTTPFVR-- 961
P N+ + + + +YW ++ + VE K+Y + + +
Sbjct: 14 TPTNVTIESYNMNP-IVYWEYQ---IMPQVPVFTVEVKNYGVKNSEWIDACINISHHYCN 69
Query: 962 --VRNLAIGSTYEFRVMAENQYGLSKPALTIDPIKAKHPFDVPGAPGAPK-GVDSTEDSI 1018
++ RV A S A + + + G G PK + E I
Sbjct: 70 ISDHVGDPSNSLWVRVKARVGQKESAYAKSEEFAVCRD-----GKIGPPKLDIRKEEKQI 124
Query: 1019 SLVWSKPRHDGGSPIQRYIVEKRLISDDKWIKASMAHIPDTSLKYVLWVSEGKSIGSERG 1078
+ P ++ D+ Y ++V S +
Sbjct: 125 MIDIFHPSV--------------FVNGDEQEVDYDPETTCYIRVYNVYVRMNGSEIQYKI 170
Query: 1079 STAQFLELLLMFIPNRVTSLIENHEYEFRVCAVNAAG--QGPWSS 1121
T + + + + N +Y V S
Sbjct: 171 LTQKEDDCDEIQCQLAIPVSSLNSQYCVSAEGVLHVWGVTTEKSK 215
>3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic
vesicle, membrane, Ca structural protein; 7.94A {Bos
taurus}
Length = 190
Score = 32.8 bits (74), Expect = 0.81
Identities = 6/41 (14%), Positives = 17/41 (41%), Gaps = 9/41 (21%)
Query: 763 KDTFKKQIKKRQYDFDETGKK----IRGKADEKVSD-YDQY 798
++ +K++++ D K R KA + + + +
Sbjct: 91 REEQRKRLQEL----DAASKVMEQEWREKAKKDLEEWNQRQ 127
>2b39_A C3; thioester, immune defense, immune system; HET: NAG BMA; 3.00A
{Bos taurus}
Length = 1661
Score = 34.0 bits (76), Expect = 0.90
Identities = 27/209 (12%), Positives = 50/209 (23%), Gaps = 21/209 (10%)
Query: 41 NVLEC-SFSVLNLVEGNDYEFRIIAVNAIGKSEPSICTTPVKICEFVGGEKPDFIVPLKD 99
L + + E + V + V FI K
Sbjct: 81 GYLSTVTIKIPASKELKSDKGHKF-VTVVATFGNVQVEKVV---LISLQSGYLFIQTDKT 136
Query: 100 LVVPLGK------LLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEV 153
+ P + + G V +G + + G+ L +N
Sbjct: 137 IYTPGSTVLYRVFTVDHKLLPVGQTVFITIETPDGIPVKR-DSKSSQNQFGILTLSWNIP 195
Query: 154 TDVDNGDYTCEAYNSVGFAHTSS---RVKIGTPPRID---RMPNALYIPEGD---NTKVK 204
V+ G + +AY S VK P + Y + +
Sbjct: 196 ELVNMGVWKIKAYYEDSPQQVFSAEFEVKEYVLPSFEVQLEPEEKFYYIDDPDGLKVNII 255
Query: 205 IFYAGDQPMEVSLTKNGRVVQSDDRFKFT 233
+ + ++ + V D R T
Sbjct: 256 ARFLYGEQVDGTAFVIFGVQDGDRRISLT 284
Score = 34.0 bits (76), Expect = 0.90
Identities = 27/209 (12%), Positives = 50/209 (23%), Gaps = 21/209 (10%)
Query: 1648 NVLEC-SFSVLNLVEGNDYEFRIIAVNAIGKSEPSICTTPVKICEFVGGEKPDFIVPLKD 1706
L + + E + V + V FI K
Sbjct: 81 GYLSTVTIKIPASKELKSDKGHKF-VTVVATFGNVQVEKVV---LISLQSGYLFIQTDKT 136
Query: 1707 LVVPLGK------LLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEV 1760
+ P + + G V +G + + G+ L +N
Sbjct: 137 IYTPGSTVLYRVFTVDHKLLPVGQTVFITIETPDGIPVKR-DSKSSQNQFGILTLSWNIP 195
Query: 1761 TDVDNGDYTCEAYNSVGFAHTSS---RVKIGTPPRID---RMPNALYIPEGD---NTKVK 1811
V+ G + +AY S VK P + Y + +
Sbjct: 196 ELVNMGVWKIKAYYEDSPQQVFSAEFEVKEYVLPSFEVQLEPEEKFYYIDDPDGLKVNII 255
Query: 1812 IFYAGDQPMEVSLTKNGRVVQSDDRFKFT 1840
+ + ++ + V D R T
Sbjct: 256 ARFLYGEQVDGTAFVIFGVQDGDRRISLT 284
>2or7_A T-cell immunoglobulin and mucin domain- containing protein 2; beta
barrel, immunoglobulin fold, IGV domain, TIM, immune
system; 1.50A {Mus musculus}
Length = 115
Score = 31.5 bits (71), Expect = 0.98
Identities = 21/105 (20%), Positives = 28/105 (26%), Gaps = 23/105 (21%)
Query: 104 LGKLLTLQCEATGTP--VPKCRWLR---------------NGREISSGARYRVETAG--- 143
G +TL C + + W NG ++ R + G
Sbjct: 11 AGHPVTLPCIYSTHLGGIVPMCWGLGECRHSYCIRSLIWTNGYTVTHQRNSRYQLKGNIS 70
Query: 144 -GVFRLHFNEVTDVDNGDYTC--EAYNSVGFAHTSSRVKIGTPPR 185
G L D G Y C E + F VK PR
Sbjct: 71 EGNVSLTIENTVVGDGGPYCCVVEIPGAFHFVDYMLEVKPELVPR 115
Score = 31.5 bits (71), Expect = 0.98
Identities = 21/105 (20%), Positives = 28/105 (26%), Gaps = 23/105 (21%)
Query: 1711 LGKLLTLQCEATGTP--VPKCRWLR---------------NGREISSGARYRVETAG--- 1750
G +TL C + + W NG ++ R + G
Sbjct: 11 AGHPVTLPCIYSTHLGGIVPMCWGLGECRHSYCIRSLIWTNGYTVTHQRNSRYQLKGNIS 70
Query: 1751 -GVFRLHFNEVTDVDNGDYTC--EAYNSVGFAHTSSRVKIGTPPR 1792
G L D G Y C E + F VK PR
Sbjct: 71 EGNVSLTIENTVVGDGGPYCCVVEIPGAFHFVDYMLEVKPELVPR 115
Score = 28.4 bits (63), Expect = 9.3
Identities = 13/55 (23%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Query: 1469 RVHKQLTMNSASLVVKNSQRSDGGQYRLQLKNPAGFDTATLHSRLRTLPDSVNPR 1523
++ ++ + SL ++N+ DGG Y ++ P F ++ P+ V PR
Sbjct: 64 QLKGNISEGNVSLTIENTVVGDGGPYCCVVEIPGAFHFVDYMLEVK--PELV-PR 115
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural
genomics consortium, TBSG domain, signal transduction;
HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB:
3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A*
3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Length = 311
Score = 33.0 bits (76), Expect = 1.1
Identities = 16/77 (20%), Positives = 31/77 (40%), Gaps = 3/77 (3%)
Query: 822 YDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELI---RKEIDIMNQLHHPK 878
Y++ E +G G VH R+ + A K + + R+E L+HP
Sbjct: 14 YELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPA 73
Query: 879 LINLHDAFEDDDEMVLI 895
++ ++D E + +
Sbjct: 74 IVAVYDTGEAETPAGPL 90
>2hft_A Human tissue factor; coagulation factor; 1.69A {Homo sapiens} SCOP:
b.1.2.1 b.1.2.1 PDB: 1jps_T 1ahw_C 1boy_A 1tfh_A 1wtg_T*
1wss_T* 1wqv_T* 1wun_T* 1wv7_T* 2zp0_T* 2zwl_T* 2zzu_T*
1z6j_T* 2aei_T* 2flb_T* 2b7d_T* 2f9b_T* 1o5d_T* 2flr_T*
1w0y_T* ...
Length = 218
Score = 32.0 bits (72), Expect = 1.6
Identities = 18/107 (16%), Positives = 31/107 (28%), Gaps = 12/107 (11%)
Query: 1250 LSWKPPLDDGGSPITNYVVEKYESATGFWSKLSSFVRSPAYDVFGLET---NRQYRFRVR 1306
L W+P + Y V+ + +G W + D+ + Y RV
Sbjct: 23 LEWEPKPVN-----QVYTVQ-ISTKSGDWKSKCFYTTDTECDLTDEIVKDVKQTYLARVF 76
Query: 1307 AENQYGVSEPLELDNSITAKFPFTVPDP---PGQPQIVDWDTNNATL 1350
+ V + P P GQP I ++ +
Sbjct: 77 SYPAGNVESTGSAGEPLYENSPEFTPYLETNLGQPTIQSFEQVGTKV 123
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP;
transcription, beta-propeller; HET: PGE PG4 MES 2PE;
2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Length = 795
Score = 32.7 bits (75), Expect = 1.7
Identities = 12/42 (28%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
Query: 716 WIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTS 757
W + ++R + + L G Y+F V A N G+ +P T+
Sbjct: 737 WYYLTDSRTVS--YSNLPQGT-YQFLVKAANSDGKWNPIPTA 775
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG
BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1
b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Length = 457
Score = 32.5 bits (74), Expect = 1.9
Identities = 36/232 (15%), Positives = 67/232 (28%), Gaps = 34/232 (14%)
Query: 478 AKAPEIIVPLRNANAIQNHNAQFQCTITG-CPKP-TISWLKGSREITPSARHHIFAEGDT 535
K P + ++ + A C + P+P T+SW G+ +
Sbjct: 130 TKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGL 189
Query: 536 YTL---IINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPRFRDTAYFDKGE 592
Y+L + + Y+C +K + + K + P G
Sbjct: 190 YSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKAEPKSCDKTHTCPPCPAPELLG-GP 248
Query: 593 NVVVKIP-----------------FTGY-PKP---KITWYRDNEVIESGGHFHVE----- 626
+V + P + K WY D + + E
Sbjct: 249 SVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNS 308
Query: 627 TSERHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQISDRPDPPQFPTV 678
T ++LT+ ++ Y+ N A ++ IS P+ P V
Sbjct: 309 TYRVVSVLTVLHQDWLNGKEYKCKVSN--KALPAPIEKTISKAKGQPREPQV 358
Score = 30.2 bits (68), Expect = 8.8
Identities = 18/107 (16%), Positives = 33/107 (30%), Gaps = 9/107 (8%)
Query: 70 KSEPSICTTPVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEATG----TPVPKCRWL 125
+ + P E +GG P + + + + C P K W
Sbjct: 229 SCDKTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWY 288
Query: 126 RNGREISSGARY-RVETAGGVFR----LHFNEVTDVDNGDYTCEAYN 167
+G E+ + R E +R L ++ +Y C+ N
Sbjct: 289 VDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSN 335
Score = 30.2 bits (68), Expect = 8.8
Identities = 18/107 (16%), Positives = 33/107 (30%), Gaps = 9/107 (8%)
Query: 1677 KSEPSICTTPVKICEFVGGEKPDFIVPLKDLVVPLGKLLTLQCEATG----TPVPKCRWL 1732
+ + P E +GG P + + + + C P K W
Sbjct: 229 SCDKTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWY 288
Query: 1733 RNGREISSGARY-RVETAGGVFR----LHFNEVTDVDNGDYTCEAYN 1774
+G E+ + R E +R L ++ +Y C+ N
Sbjct: 289 VDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSN 335
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid
(ONE-component...; beta-propeller, beta-sandwich; 3.30A
{Bacteroides thetaiotaomicron}
Length = 781
Score = 32.7 bits (75), Expect = 1.9
Identities = 12/42 (28%), Positives = 14/42 (33%), Gaps = 3/42 (7%)
Query: 716 WIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTS 757
W + T + PG YEF V A TTS
Sbjct: 731 WYTINEQNSVT--FRNIPPGK-YEFLVKARLHNQDWSEDTTS 769
>2ptt_B Natural killer cell receptor 2B4; CD244, CD48, NK cell receptor,
X-RAY, immune system; 1.63A {Mus musculus} PDB: 2ptu_A
1z2k_A
Length = 112
Score = 30.1 bits (67), Expect = 2.3
Identities = 14/52 (26%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Query: 223 VVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSV-SGTFTINI 273
V D + F D + IK + +D+G Y + ++N+ G V + F + I
Sbjct: 61 NVSFSDIYGFDYGD--FALSIKSAKLQDSGHYLLEITNTGGKVCNKNFQLLI 110
Score = 30.1 bits (67), Expect = 2.3
Identities = 14/52 (26%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Query: 1830 VVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSV-SGTFTINI 1880
V D + F D + IK + +D+G Y + ++N+ G V + F + I
Sbjct: 61 NVSFSDIYGFDYGD--FALSIKSAKLQDSGHYLLEITNTGGKVCNKNFQLLI 110
>2uvf_A Exopolygalacturonase; GH28, pectin, cell WALL, hydrolase,
periplasm, beta-helix, glycosidase, EXO-activity; HET:
AD0; 2.1A {Yersinia enterocolitica} PDB: 2uve_A*
Length = 608
Score = 31.9 bits (72), Expect = 2.7
Identities = 33/141 (23%), Positives = 47/141 (33%), Gaps = 29/141 (20%)
Query: 655 LGMDSAIVKIQISDRPDPPQFPTVEDIGHD--SLALVWRAPIWDGGSNITNYIV------ 706
L + + + S D PQ V + +D S+ LVW+AP + I +Y +
Sbjct: 20 LMVGTPMAMAAKSSSLDAPQQLQVPTLAYDESSIVLVWKAP--EDTRKIVDYQIFSAGKL 77
Query: 707 -------EKREHPMSSWIR----------VGNTRFTTMAITGLSPGHQYEFRVYAENVYG 749
P +I + GL P Y+F V A Y
Sbjct: 78 LGKASDNNDNFSPAKPYIDHFYVNDKDNFQHKIVMQNFTVIGLKPETSYQFTVKA--QYA 135
Query: 750 RSDPSTTSDLITTKDTFKKQI 770
S S IT K + K QI
Sbjct: 136 DGSLSVASKPITAKTSAKPQI 156
>2vsd_A CHIR AB1; immune system receptor, FC receptor; HET: NAG NDG MAN;
1.82A {Gallus gallus}
Length = 105
Score = 30.0 bits (68), Expect = 2.7
Identities = 16/68 (23%), Positives = 20/68 (29%), Gaps = 4/68 (5%)
Query: 101 VVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGD 160
V LG +TL+C + NG + E F F D G
Sbjct: 15 GVSLGDTVTLRCHLP-RMAAWVQLWLNGT-LRFDKEKDKEQDAAEF--SFAVTNLEDAGT 70
Query: 161 YTCEAYNS 168
Y C S
Sbjct: 71 YQCRYQVS 78
Score = 30.0 bits (68), Expect = 2.7
Identities = 16/68 (23%), Positives = 20/68 (29%), Gaps = 4/68 (5%)
Query: 1708 VVPLGKLLTLQCEATGTPVPKCRWLRNGREISSGARYRVETAGGVFRLHFNEVTDVDNGD 1767
V LG +TL+C + NG + E F F D G
Sbjct: 15 GVSLGDTVTLRCHLP-RMAAWVQLWLNGT-LRFDKEKDKEQDAAEF--SFAVTNLEDAGT 70
Query: 1768 YTCEAYNS 1775
Y C S
Sbjct: 71 YQCRYQVS 78
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal
regulatory protein alpha, immunoglobulin superfamily,
phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Length = 327
Score = 31.4 bits (71), Expect = 3.0
Identities = 31/218 (14%), Positives = 59/218 (27%), Gaps = 32/218 (14%)
Query: 100 LVVPLGKLLTLQCEATG-TPVPKCRWLRNG--------------REISSGARYRVETAGG 144
+ V G+ L C T PV +W R + +
Sbjct: 13 VSVAAGESAILHCTVTSLIPVGPIQWFRGAGPARELIYNQKEGHFPRVTTVSESTKRENM 72
Query: 145 VFRLHFNEVTDVDNGDYTCEAYNS-------VGFAHTSSRVKIGTPPRIDRMPNALYIPE 197
F + + +T D G Y C + A T V+ + P A P+
Sbjct: 73 DFSISISNITPADAGTYYCVKFRKGSPDTEFKSGAGTELSVRAKPSAPVVSGPAARATPQ 132
Query: 198 GDNT---KVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDD--YIIIF---IKEIRKE 249
+ + F + + + KNG + V + Y I + R++
Sbjct: 133 HTVSFTCESHGFS--PRDITLKWFKNGNELSDFQTNVDPVGESVSYSIHSTAKVVLTRED 190
Query: 250 DAGDYTVNLSNSSGSVSGTFTINITGLPGPPIGPLDVS 287
+++ + L+V+
Sbjct: 191 VHSQVICEVAHVTLQGDPLRGTANLSETIRVPPTLEVT 228
Score = 31.4 bits (71), Expect = 3.0
Identities = 31/218 (14%), Positives = 59/218 (27%), Gaps = 32/218 (14%)
Query: 1707 LVVPLGKLLTLQCEATG-TPVPKCRWLRNG--------------REISSGARYRVETAGG 1751
+ V G+ L C T PV +W R + +
Sbjct: 13 VSVAAGESAILHCTVTSLIPVGPIQWFRGAGPARELIYNQKEGHFPRVTTVSESTKRENM 72
Query: 1752 VFRLHFNEVTDVDNGDYTCEAYNS-------VGFAHTSSRVKIGTPPRIDRMPNALYIPE 1804
F + + +T D G Y C + A T V+ + P A P+
Sbjct: 73 DFSISISNITPADAGTYYCVKFRKGSPDTEFKSGAGTELSVRAKPSAPVVSGPAARATPQ 132
Query: 1805 GDNT---KVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDD--YIIIF---IKEIRKE 1856
+ + F + + + KNG + V + Y I + R++
Sbjct: 133 HTVSFTCESHGFS--PRDITLKWFKNGNELSDFQTNVDPVGESVSYSIHSTAKVVLTRED 190
Query: 1857 DAGDYTVNLSNSSGSVSGTFTINITGLPGPPIGPLDVS 1894
+++ + L+V+
Sbjct: 191 VHSQVICEVAHVTLQGDPLRGTANLSETIRVPPTLEVT 228
>1lk2_B Beta-2-microglobulin; class I MHC-peptide complex, high resolution,
anisotropic AN refinement, immune system; HET: NAG FUC;
1.35A {Mus musculus} SCOP: b.1.1.2 PDB: 1bqh_B 1cd1_B
1fo0_L* 1fzj_B* 1fzm_B* 1fzo_B* 1g6r_L 1fzk_B* 1g7q_B*
1hoc_B 1inq_B 1juf_B 1k8d_B 1kbg_L* 1kj2_L* 1kj3_L
1kpu_B* 1kpv_B* 1ld9_B 1ldp_L* ...
Length = 99
Score = 29.6 bits (67), Expect = 3.3
Identities = 10/35 (28%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Query: 102 VPLGKLLTLQCEATGT--PVPKCRWLRNGREISSG 134
GK L C T P + + L+NG++I
Sbjct: 15 PENGKPNILNCYVTQFHPPHIEIQMLKNGKKIPKV 49
Score = 29.6 bits (67), Expect = 3.3
Identities = 10/35 (28%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Query: 1709 VPLGKLLTLQCEATGT--PVPKCRWLRNGREISSG 1741
GK L C T P + + L+NG++I
Sbjct: 15 PENGKPNILNCYVTQFHPPHIEIQMLKNGKKIPKV 49
>3o81_A Beta-2-microglobulin; IG-like C1-type (immunoglobulin-like) domain,
histocompatibi antigen, MHC class I molecule from B21
chicken, immune SYST; 2.00A {Gallus gallus}
Length = 119
Score = 30.1 bits (68), Expect = 3.4
Identities = 11/67 (16%), Positives = 20/67 (29%), Gaps = 4/67 (5%)
Query: 102 VPLGKLLTLQCEATG--TPVPKCRWLRNGREISSGARYRVETAG-GVFRLHFNEVTDVDN 158
G L C A G P +++G + + F+ + +
Sbjct: 35 ASAGTKNVLNCFAAGFHPPKISITLMKDGVPMEGAQYSDMSFNDDWTFQRLVHADFTPSS 94
Query: 159 GD-YTCE 164
G Y C+
Sbjct: 95 GSTYACK 101
Score = 30.1 bits (68), Expect = 3.4
Identities = 11/67 (16%), Positives = 20/67 (29%), Gaps = 4/67 (5%)
Query: 1709 VPLGKLLTLQCEATG--TPVPKCRWLRNGREISSGARYRVETAG-GVFRLHFNEVTDVDN 1765
G L C A G P +++G + + F+ + +
Sbjct: 35 ASAGTKNVLNCFAAGFHPPKISITLMKDGVPMEGAQYSDMSFNDDWTFQRLVHADFTPSS 94
Query: 1766 GD-YTCE 1771
G Y C+
Sbjct: 95 GSTYACK 101
>2pkd_A SLAM family member 5; signaling lymphocyte activation molecule,
IGV, immunoglobulin variable, IGC, immunoglobulin
constant, signaling protein; 2.04A {Homo sapiens}
Length = 111
Score = 29.9 bits (67), Expect = 3.4
Identities = 10/33 (30%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Query: 243 IKEIRKEDAGDYT--VNLSNSSGSVSGTFTINI 273
I ++R EDAGDY +N + + + + I
Sbjct: 76 ISDLRMEDAGDYKADINTQADPYTTTKRYNLQI 108
Score = 29.9 bits (67), Expect = 3.4
Identities = 10/33 (30%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Query: 1850 IKEIRKEDAGDYT--VNLSNSSGSVSGTFTINI 1880
I ++R EDAGDY +N + + + + I
Sbjct: 76 ISDLRMEDAGDYKADINTQADPYTTTKRYNLQI 108
>3bia_X T-cell immunoglobulin and mucin domain- containing protein 4; beta
barrel, immunoglobulin fold, IGV domain, TIM,
glycoprotein; HET: TLA; 2.20A {Mus musculus} PDB:
3bi9_X* 3bib_X*
Length = 116
Score = 29.9 bits (67), Expect = 3.8
Identities = 17/86 (19%), Positives = 28/86 (32%), Gaps = 23/86 (26%)
Query: 100 LVVPLGKLLTLQC---EATGTPVPKCRWLR---------------NGREISSGARYRVET 141
++ LG+ +TL C + + C W + +G I S +
Sbjct: 6 IIGFLGQPVTLPCHYLSWSQSRNSMC-WGKGSCPNSKCNAELLRTDGTRIISRKSTKYTL 64
Query: 142 AG----GVFRLHFNEVTDVDNGDYTC 163
G G L + D+G Y C
Sbjct: 65 LGKVQFGEVSLTISNTNRGDSGVYCC 90
Score = 29.9 bits (67), Expect = 3.8
Identities = 17/86 (19%), Positives = 28/86 (32%), Gaps = 23/86 (26%)
Query: 1707 LVVPLGKLLTLQC---EATGTPVPKCRWLR---------------NGREISSGARYRVET 1748
++ LG+ +TL C + + C W + +G I S +
Sbjct: 6 IIGFLGQPVTLPCHYLSWSQSRNSMC-WGKGSCPNSKCNAELLRTDGTRIISRKSTKYTL 64
Query: 1749 AG----GVFRLHFNEVTDVDNGDYTC 1770
G G L + D+G Y C
Sbjct: 65 LGKVQFGEVSLTISNTNRGDSGVYCC 90
Score = 28.8 bits (64), Expect = 7.4
Identities = 14/51 (27%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Query: 1473 QLTMNSASLVVKNSQRSDGGQYRLQLKNPAGFDTATLHSRLRTLPDSVNPR 1523
++ SL + N+ R D G Y +++ P F+ + RL V PR
Sbjct: 67 KVQFGEVSLTISNTNRGDSGVYCCRIEVPGWFNDVKKNVRLELRRALV-PR 116
>2ptt_A CD48 antigen; CD244, CD48, NK cell receptor, X-RAY, immune system;
1.63A {Mus musculus} PDB: 2ptv_A
Length = 110
Score = 29.4 bits (66), Expect = 3.9
Identities = 8/32 (25%), Positives = 14/32 (43%), Gaps = 3/32 (9%)
Query: 243 IKEIRKEDAGDYTVNLSNSSGSVSGTFTINIT 274
I +RKED G Y + + + + I +
Sbjct: 77 ISNVRKEDKGTYYMRVLRETEN---ELKITLE 105
Score = 29.4 bits (66), Expect = 3.9
Identities = 8/32 (25%), Positives = 14/32 (43%), Gaps = 3/32 (9%)
Query: 1850 IKEIRKEDAGDYTVNLSNSSGSVSGTFTINIT 1881
I +RKED G Y + + + + I +
Sbjct: 77 ISNVRKEDKGTYYMRVLRETEN---ELKITLE 105
Score = 29.4 bits (66), Expect = 4.9
Identities = 20/111 (18%), Positives = 35/111 (31%), Gaps = 22/111 (19%)
Query: 1136 KITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPI------------WTVNGDEVSPD--- 1180
+I + SI D+ G T+ + I + N + +
Sbjct: 3 RIRARGSIPDINAYTGSNVTLKIHKDPLGPYRRITWLHTKNQKILEYNYNSTKTIFESEF 62
Query: 1181 -GRIKF-ETSENQTIYRNKSAKRATDSGSYTIQLVNTVGSDSASCKVYVVD 1229
GR+ E + I S R D G+Y ++ V + + V D
Sbjct: 63 KGRVYLEENNGALHI----SNVRKEDKGTYYMR-VLRETENELKITLEVFD 108
>1bii_B Beta-2 microglobulin, MHC class I H-2DD; complex (MHC I/peptide),
major histocompatibility complex class I DD,
transmembrane, glycoprotein; 2.40A {Mus musculus} SCOP:
b.1.1.2
Length = 119
Score = 29.7 bits (67), Expect = 4.0
Identities = 14/67 (20%), Positives = 23/67 (34%), Gaps = 4/67 (5%)
Query: 102 VPLGKLLTLQCEATG--TPVPKCRWLRNGREISSGARYRVETAG-GVFRLHFNEVTDVDN 158
GK L C T P + + L+NG++I + + F + +
Sbjct: 35 PENGKPNILNCYVTQFHPPHIEIQMLKNGKKIPKVEMSDMSFSKDWSFYILAHTEFTPTE 94
Query: 159 GD-YTCE 164
D Y C
Sbjct: 95 TDTYACR 101
Score = 29.7 bits (67), Expect = 4.0
Identities = 14/67 (20%), Positives = 23/67 (34%), Gaps = 4/67 (5%)
Query: 1709 VPLGKLLTLQCEATG--TPVPKCRWLRNGREISSGARYRVETAG-GVFRLHFNEVTDVDN 1765
GK L C T P + + L+NG++I + + F + +
Sbjct: 35 PENGKPNILNCYVTQFHPPHIEIQMLKNGKKIPKVEMSDMSFSKDWSFYILAHTEFTPTE 94
Query: 1766 GD-YTCE 1771
D Y C
Sbjct: 95 TDTYACR 101
>2oyp_A Hepatitis A virus cellular receptor 2; TIM-3, T-cell immunoglobulin
mucin, signaling protein; 1.95A {Mus musculus} PDB:
3kaa_A*
Length = 109
Score = 29.5 bits (66), Expect = 4.0
Identities = 11/46 (23%), Positives = 20/46 (43%)
Query: 1469 RVHKQLTMNSASLVVKNSQRSDGGQYRLQLKNPAGFDTATLHSRLR 1514
++ L SL++KN D G Y +++ P + L +L
Sbjct: 62 QLKGDLNKGDVSLIIKNVTLDDHGTYCCRIQFPGLMNDKKLELKLD 107
>2kzw_A Uncharacterized protein; structural genomics, northeast structural
genomics consortiu PSI-2, protein structure initiative;
NMR {Methanosarcina mazei}
Length = 145
Score = 30.3 bits (68), Expect = 4.1
Identities = 10/27 (37%), Positives = 15/27 (55%), Gaps = 2/27 (7%)
Query: 250 DAGDYTVNL--SNSSGSVSGTFTINIT 274
+ G+Y V+L SN + S S + TI
Sbjct: 112 NEGEYIVSLIVSNENDSDSASVTIRAL 138
Score = 30.3 bits (68), Expect = 4.1
Identities = 10/27 (37%), Positives = 15/27 (55%), Gaps = 2/27 (7%)
Query: 1857 DAGDYTVNL--SNSSGSVSGTFTINIT 1881
+ G+Y V+L SN + S S + TI
Sbjct: 112 NEGEYIVSLIVSNENDSDSASVTIRAL 138
>1wgo_A VPS10 domain-containing receptor sorcs2; polycystic kidney disease,
PKD, structural genomics, KIAA1329 protein; NMR {Homo
sapiens} SCOP: b.1.3.1
Length = 123
Score = 29.8 bits (66), Expect = 4.1
Identities = 23/112 (20%), Positives = 33/112 (29%), Gaps = 13/112 (11%)
Query: 1126 IMCCAPPCAPKITSDLSIRD-MTVLAGEEFTITVPFSGRPKPTPIWTVN-GDEVSPDGRI 1183
+ P P+ + + V GE+ V T + V+ GD
Sbjct: 19 VQLQCPLTPPRGLQVSIQGEAVAVRPGEDVLFVVRQEQGDVLTTKYQVDLGDGFKAMYVN 78
Query: 1184 KFETSENQT-IYRNKSAKRATDSGSYTIQLV--NTVGSDSASCKVYVVDKPS 1232
T E Y + G Y + + NT G D A V V S
Sbjct: 79 LTLTGEPIRHRYES--------PGIYRVSVRAENTAGHDEAVLFVQVSGPSS 122
Score = 29.0 bits (64), Expect = 8.0
Identities = 7/29 (24%), Positives = 14/29 (48%), Gaps = 2/29 (6%)
Query: 249 EDAGDYTVNL--SNSSGSVSGTFTINITG 275
E G Y V++ N++G + ++G
Sbjct: 91 ESPGIYRVSVRAENTAGHDEAVLFVQVSG 119
Score = 29.0 bits (64), Expect = 8.0
Identities = 7/29 (24%), Positives = 14/29 (48%), Gaps = 2/29 (6%)
Query: 1856 EDAGDYTVNL--SNSSGSVSGTFTINITG 1882
E G Y V++ N++G + ++G
Sbjct: 91 ESPGIYRVSVRAENTAGHDEAVLFVQVSG 119
>3udw_C Poliovirus receptor; PVR tigit IGSF signal transduction immunology,
IGSF, cell SU receptor signalling, glycosylation,
membrane protein; HET: NAG; 2.90A {Homo sapiens}
Length = 118
Score = 29.4 bits (66), Expect = 5.1
Identities = 17/97 (17%), Positives = 23/97 (23%), Gaps = 23/97 (23%)
Query: 94 IVPLKDLVVPLGKLLTLQCEATGTPVPKCR-----WLR-------------NGREISSGA 135
+ + LG +TL C + W R G S
Sbjct: 4 VQAPTQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESK 63
Query: 136 RYRVETAG-----GVFRLHFNEVTDVDNGDYTCEAYN 167
R A L + D G+YTC
Sbjct: 64 RLEFVAARLGAELRNASLRMFGLRVEDEGNYTCLFVT 100
Score = 29.4 bits (66), Expect = 5.1
Identities = 17/97 (17%), Positives = 23/97 (23%), Gaps = 23/97 (23%)
Query: 1701 IVPLKDLVVPLGKLLTLQCEATGTPVPKCR-----WLR-------------NGREISSGA 1742
+ + LG +TL C + W R G S
Sbjct: 4 VQAPTQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESK 63
Query: 1743 RYRVETAG-----GVFRLHFNEVTDVDNGDYTCEAYN 1774
R A L + D G+YTC
Sbjct: 64 RLEFVAARLGAELRNASLRMFGLRVEDEGNYTCLFVT 100
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino
acid sequence, binding sites, domain, models, molecular;
HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Length = 364
Score = 30.5 bits (69), Expect = 6.5
Identities = 12/86 (13%), Positives = 29/86 (33%), Gaps = 12/86 (13%)
Query: 804 SKYVPQPV---DIKTSSVYDHYDILEEIGTGAFGVVHRCRERKTGNI-----FAAKFIPV 855
+++ + +I T + + IG G FG ++ + ++ K P
Sbjct: 16 KRHLAEQFAVGEIITDMAAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPS 75
Query: 856 SHNLEKELIRKEIDIMNQLHHPKLIN 881
+ + E+ + P+ I
Sbjct: 76 DNG----PLFTELKFYQRAAKPEQIQ 97
>3p73_B Beta-2-microglobulin; IG-like C1-type (immunoglobulin-like) domain,
histocompatibi antigen, immune system; HET: 16A; 1.32A
{Gallus gallus} PDB: 3p77_B* 3bev_B 3bew_B 3jvg_C*
2yez_B 2yf5_B 2yf6_B 2yf1_B*
Length = 99
Score = 28.4 bits (64), Expect = 6.9
Identities = 11/67 (16%), Positives = 20/67 (29%), Gaps = 4/67 (5%)
Query: 102 VPLGKLLTLQCEATG--TPVPKCRWLRNGREISSGARYRVETAG-GVFRLHFNEVTDVDN 158
G L C A G P +++G + + F+ + +
Sbjct: 15 ASAGTKNVLNCFAAGFHPPKISITLMKDGVPMEGAQYSDMSFNDDWTFQRLVHADFTPSS 74
Query: 159 GD-YTCE 164
G Y C+
Sbjct: 75 GSTYACK 81
Score = 28.4 bits (64), Expect = 6.9
Identities = 11/67 (16%), Positives = 20/67 (29%), Gaps = 4/67 (5%)
Query: 1709 VPLGKLLTLQCEATG--TPVPKCRWLRNGREISSGARYRVETAG-GVFRLHFNEVTDVDN 1765
G L C A G P +++G + + F+ + +
Sbjct: 15 ASAGTKNVLNCFAAGFHPPKISITLMKDGVPMEGAQYSDMSFNDDWTFQRLVHADFTPSS 74
Query: 1766 GD-YTCE 1771
G Y C+
Sbjct: 75 GSTYACK 81
>1imh_C NF-AT5, tonebp, nuclear factor of activated T cells 5; beta barrel,
protein-DNA complex, double helix, DNA encirclement,
transcription/DNA complex; 2.86A {Homo sapiens} SCOP:
b.1.18.1 b.2.5.3
Length = 281
Score = 30.5 bits (68), Expect = 7.0
Identities = 24/130 (18%), Positives = 38/130 (29%), Gaps = 21/130 (16%)
Query: 1106 FRVCAVNAAGQ-GPWSSSSDIIMCCAPPCAPKITSDLSIRDMTVLAGEEFTIT------- 1157
FRV + G + S I+C P P+I S+ +V EE +
Sbjct: 152 FRVNIMRKDGSTLTLQTPSSPILCTQPAGVPEILK-KSLHSCSVKGEEEVFLIGKNFLKG 210
Query: 1158 --VPFSGRPKPTPIWTVNGD---EVSPDGRIKFETSENQTIYRNKSAKRATDSGSYTIQL 1212
V F W + E+ + + Y ++ T S I +
Sbjct: 211 TKVIFQENVSDENSWKSEAEIDMELFHQNHLIVKVPP----YHDQH---ITLPVSVGIYV 263
Query: 1213 VNTVGSDSAS 1222
V G
Sbjct: 264 VTNAGRSHDV 273
>2vn6_A Cohesin, scaffolding protein; cell adhesion, carbohydrate metabolism,
polysaccharide degradation, hydrolase, glycosidase,
cellulose degradation; 1.49A {Clostridium cellulolyticum}
SCOP: b.2.2.2 PDB: 2vn5_A 1g1k_A
Length = 151
Score = 29.3 bits (65), Expect = 7.2
Identities = 9/44 (20%), Positives = 17/44 (38%)
Query: 1130 APPCAPKITSDLSIRDMTVLAGEEFTITVPFSGRPKPTPIWTVN 1173
P P + +++ G+ T+ V F+ K + T N
Sbjct: 3 LPKDIPGDSLKVTVGTANGKPGDTVTVPVTFADVAKMKNVGTCN 46
>2pn5_A TEP1R, thioester-containing protein I; FULL-length mature peptide,
immune system; HET: NAG; 2.70A {Anopheles gambiae}
Length = 1325
Score = 30.8 bits (68), Expect = 7.3
Identities = 39/293 (13%), Positives = 74/293 (25%), Gaps = 32/293 (10%)
Query: 127 NGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSS-RVKIGTPPR 185
I + + GVF G + + + VK
Sbjct: 145 QRNVIRKWST--AKLYAGVFESDLQIAPTPMLGVWNISVEVEGEELVSKTFEVKEYVLST 202
Query: 186 IDR--MPNALYIPEGDNTKVKI--FYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIII 241
D MP+ + + E + I Y +P++ + DD+ K
Sbjct: 203 FDVQVMPSVIPLEEHQAVNLTIEANYHFGKPVQGVAK--VELYLDDDKLKLKKELTVYGK 260
Query: 242 FIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPP 301
E+R ++ ++ V +F T + V + L P
Sbjct: 261 GQVELRFDNF---AMDADQQDVPVKVSFVEQYTNRTVVKQSQITVYR-YAYRVELIKESP 316
Query: 302 KYDGGLKVTHYV-VERRDISMPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMG 360
++ GL + D + I D F + + +G+
Sbjct: 317 QFRPGLPFKCALQFTHHDGTPAKGISGKVEVSDVRFETTTTS------------DNDGLI 364
Query: 361 ----PPLEGINPIKAKSPYDKPSPP--GIPVVTQVGGDFVNLSWDKPLDDGGS 407
P EG + + V V ++ L P+
Sbjct: 365 KLELQPSEGTEQLSIHFNAVDGFFFYEDVNKVETVTDAYIKLELKSPIKRNKL 417
Score = 30.8 bits (68), Expect = 7.3
Identities = 39/293 (13%), Positives = 74/293 (25%), Gaps = 32/293 (10%)
Query: 1734 NGREISSGARYRVETAGGVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSS-RVKIGTPPR 1792
I + + GVF G + + + VK
Sbjct: 145 QRNVIRKWST--AKLYAGVFESDLQIAPTPMLGVWNISVEVEGEELVSKTFEVKEYVLST 202
Query: 1793 IDR--MPNALYIPEGDNTKVKI--FYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIII 1848
D MP+ + + E + I Y +P++ + DD+ K
Sbjct: 203 FDVQVMPSVIPLEEHQAVNLTIEANYHFGKPVQGVAK--VELYLDDDKLKLKKELTVYGK 260
Query: 1849 FIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPP 1908
E+R ++ ++ V +F T + V + L P
Sbjct: 261 GQVELRFDNF---AMDADQQDVPVKVSFVEQYTNRTVVKQSQITVYR-YAYRVELIKESP 316
Query: 1909 KYDGGLKVTHYV-VERRDISMPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMG 1967
++ GL + D + I D F + + +G+
Sbjct: 317 QFRPGLPFKCALQFTHHDGTPAKGISGKVEVSDVRFETTTTS------------DNDGLI 364
Query: 1968 ----PPLEGINPIKAKSPYDKPSPP--GIPVVTQVGGDFVNLSWDKPLDDGGS 2014
P EG + + V V ++ L P+
Sbjct: 365 KLELQPSEGTEQLSIHFNAVDGFFFYEDVNKVETVTDAYIKLELKSPIKRNKL 417
>3c5j_A HLA class II histocompatibility antigen, DR alpha; HLA, MHC class
II, glycoprotein, immune response, membrane,
transmembrane, GTP-binding, methylation; HET: NAG; 1.80A
{Homo sapiens} PDB: 1d5x_A* 1d5z_A* 1d6e_A* 1d5m_A
1fyt_A* 1hqr_A 1j8h_A* 1r5i_A 1seb_A 1zgl_A 2seb_A*
1fv1_A* 2ipk_A* 3pdo_A 3pgc_A 3pgd_A 1ymm_A* 1aqd_A
2g9h_A* 1h15_A ...
Length = 181
Score = 29.7 bits (67), Expect = 7.5
Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Query: 102 VPLGKLLTLQCEATG--TPVPKCRWLRNGREISSG 134
V L + L C PV WLRNG+ +++G
Sbjct: 97 VELREPNVLICFIDKFTPPVVNVTWLRNGKPVTTG 131
Score = 29.7 bits (67), Expect = 7.5
Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Query: 1709 VPLGKLLTLQCEATG--TPVPKCRWLRNGREISSG 1741
V L + L C PV WLRNG+ +++G
Sbjct: 97 VELREPNVLICFIDKFTPPVVNVTWLRNGKPVTTG 131
>1iak_A MHC class II I-AK; histocompatibility antigen, peptide complex,
histocompa antigen I-AK; HET: NAG; 1.90A {Mus musculus}
SCOP: b.1.1.2 d.19.1.1 PDB: 1d9k_C* 1k2d_A* 1jl4_A
2pxy_C 1u3h_C 2z31_C 1muj_A* 1lnu_A* 3c5z_C 3c60_C
3c6l_C 3rdt_C 2iad_A 1iao_A 1es0_A 3cup_A* 3mbe_A*
1f3j_A*
Length = 199
Score = 29.7 bits (67), Expect = 7.9
Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Query: 102 VPLGKLLTLQCEATG--TPVPKCRWLRNGREISSG 134
V LG+ TL C PV WLRN + ++ G
Sbjct: 101 VLLGQPNTLICFVDNIFPPVINITWLRNSKSVTDG 135
Score = 29.7 bits (67), Expect = 7.9
Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Query: 1709 VPLGKLLTLQCEATG--TPVPKCRWLRNGREISSG 1741
V LG+ TL C PV WLRN + ++ G
Sbjct: 101 VLLGQPNTLICFVDNIFPPVINITWLRNSKSVTDG 135
>3kvc_A Retinoid isomerohydrolase; 7-bladed beta-propeller, monotopic
membrane protein, sensory transduction, vision,
isomerase, non-heme iron protein; 1.90A {Bos taurus}
PDB: 3fsn_A
Length = 533
Score = 30.4 bits (68), Expect = 8.4
Identities = 15/115 (13%), Positives = 30/115 (26%), Gaps = 7/115 (6%)
Query: 850 AKFIPVSHNLEKELIRK-EIDIMNQLHHPKLINLHDAFEDDDEMVLIFEVLDRPHPPENL 908
+K + K N HH IN +ED + +++ N
Sbjct: 287 VWLHIADKKRKKYINNKYRTSPFNLFHH---IN---TYEDHEFLIVDLCCWKGFEFVYNY 340
Query: 909 HADEFAGDSLTLYWTPPRDNGGSEITNYVVEKKDYNSTVWTKVSSYVTTPFVRVR 963
++ R E+ YV+ + + + T +
Sbjct: 341 LYLANLRENWEEVKKNARKAPQPEVRRYVLPLNIDKADTGKNLVTLPNTTATAIL 395
>1w9s_A BH0236 protein, BHCBM6; carbohydrate-binding module, lectin,
beta-glucan, carbohydrate binding, glycoside hydrolase;
1.59A {Bacillus halodurans} SCOP: b.18.1.10 PDB: 1w9t_A*
1w9w_A*
Length = 142
Score = 29.1 bits (65), Expect = 9.1
Identities = 6/36 (16%), Positives = 13/36 (36%)
Query: 251 AGDYTVNLSNSSGSVSGTFTINITGLPGPPIGPLDV 286
++ + +S + G I G +G + V
Sbjct: 58 RDASSIEVRVASDTPGGRIEIRTGSPTGTLLGDVQV 93
Score = 29.1 bits (65), Expect = 9.1
Identities = 6/36 (16%), Positives = 13/36 (36%)
Query: 1858 AGDYTVNLSNSSGSVSGTFTINITGLPGPPIGPLDV 1893
++ + +S + G I G +G + V
Sbjct: 58 RDASSIEVRVASDTPGGRIEIRTGSPTGTLLGDVQV 93
>3cxe_C Granulocyte-macrophage colony-stimulating factor subunit alpha;
GM-CSF, receptor complex, dodecamer, disease mutation,
glyco membrane; HET: NAG BMA; 3.30A {Homo sapiens}
Length = 120
Score = 28.5 bits (63), Expect = 9.6
Identities = 13/97 (13%), Positives = 30/97 (30%), Gaps = 12/97 (12%)
Query: 1237 PLDVS-DITPESCSLSWKPPLDDGGSPITNYVVE-KYESATGFWSKLSSFVR-----SPA 1289
P +V+ C + WK P ++ + + +
Sbjct: 21 PSNVTVRCNTTHCLVRWKQPRTYQKLSYLDFQYQLDVHRKNTQPGTENLLINVSGDLENR 80
Query: 1290 YDVFGLETNRQYRFRVRAENQYGV-----SEPLELDN 1321
Y+ E ++ ++RA + + SE +E +
Sbjct: 81 YNFPSSEPRAKHSVKIRAADVRILNWSSWSEAIEFGS 117
>3f8u_B Tapasin; endoplasmic reticulum, glycoprotein, immunoglobulin
domain, microsome, protein disulfide isomerase,
thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo
sapiens}
Length = 401
Score = 30.0 bits (66), Expect = 9.6
Identities = 14/90 (15%), Positives = 23/90 (25%), Gaps = 7/90 (7%)
Query: 144 GVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKV 203
G V G Y + + + + PP++ MP L
Sbjct: 252 GNGTFWLPRVQPFQEGTYLATIHLPYLQGQVTLELAVYKPPKVSLMPATLARAAPGEAPP 311
Query: 204 KI------FYAGDQPMEVSLTKNGRVVQSD 227
++ FY +EV G
Sbjct: 312 ELLCLVSHFY-PSGGLEVEWELRGGPGGRS 340
Score = 30.0 bits (66), Expect = 9.6
Identities = 14/90 (15%), Positives = 23/90 (25%), Gaps = 7/90 (7%)
Query: 1751 GVFRLHFNEVTDVDNGDYTCEAYNSVGFAHTSSRVKIGTPPRIDRMPNALYIPEGDNTKV 1810
G V G Y + + + + PP++ MP L
Sbjct: 252 GNGTFWLPRVQPFQEGTYLATIHLPYLQGQVTLELAVYKPPKVSLMPATLARAAPGEAPP 311
Query: 1811 KI------FYAGDQPMEVSLTKNGRVVQSD 1834
++ FY +EV G
Sbjct: 312 ELLCLVSHFY-PSGGLEVEWELRGGPGGRS 340
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.317 0.136 0.416
Gapped
Lambda K H
0.267 0.0672 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 35,542,733
Number of extensions: 2246507
Number of successful extensions: 13945
Number of sequences better than 10.0: 1
Number of HSP's gapped: 9127
Number of HSP's successfully gapped: 4230
Length of query: 2245
Length of database: 6,701,793
Length adjustment: 109
Effective length of query: 2136
Effective length of database: 3,658,404
Effective search space: 7814350944
Effective search space used: 7814350944
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 65 (28.9 bits)