RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy7044
(68 letters)
>d1gxea_ b.1.1.4 (A:) Cardiac myosin binding protein C, different
domains {Human (Homo sapiens) [TaxId: 9606]}
Length = 130
Score = 40.8 bits (94), Expect = 9e-07
Identities = 10/51 (19%), Positives = 26/51 (50%)
Query: 11 VRSEGNVEIVNVPYNTKLSIVDILRKNSGVYRIKAENASGKDEADVEITVL 61
+EG V + + ++ +++ GVY + +N G+D+ ++ + V+
Sbjct: 79 CETEGRVRVETTKDRSIFTVEGAEKEDEGVYTVTVKNPVGEDQVNLTVKVI 129
>d2cqva1 b.1.1.4 (A:8-108) Telokin {Human (Homo sapiens) [TaxId:
9606]}
Length = 101
Score = 39.8 bits (92), Expect = 1e-06
Identities = 15/57 (26%), Positives = 31/57 (54%)
Query: 5 FCPRSQVRSEGNVEIVNVPYNTKLSIVDILRKNSGVYRIKAENASGKDEADVEITVL 61
R Q++ ++++ N +KL+I+ +++ G Y + EN G +A V +TV+
Sbjct: 35 MKFRKQIQESEHMKVENSENGSKLTILAARQEHCGCYTLLVENKLGSRQAQVNLTVV 91
>d1biha4 b.1.1.4 (A:307-395) Hemolin {Moth (Hyalophora cecropia)
[TaxId: 7123]}
Length = 89
Score = 36.7 bits (84), Expect = 2e-05
Identities = 8/37 (21%), Positives = 15/37 (40%)
Query: 24 YNTKLSIVDILRKNSGVYRIKAENASGKDEADVEITV 60
++ L I + + G Y +A N G + + V
Sbjct: 52 TDSGLVIKGVKNGDKGYYGCRATNEHGDKYFETLVQV 88
>d1he7a_ b.1.1.4 (A:) High affinity nerve growth factor receptor
TrkA, different domains {Human (Homo sapiens) [TaxId:
9606]}
Length = 107
Score = 36.1 bits (82), Expect = 4e-05
Identities = 8/41 (19%), Positives = 15/41 (36%)
Query: 21 NVPYNTKLSIVDILRKNSGVYRIKAENASGKDEADVEITVL 61
+ L + N+G Y + A N G+ A + +
Sbjct: 58 ETVRHGCLRLNQPTHVNNGNYTLLAANPFGQASASIMAAFM 98
>d1qz1a3 b.1.1.4 (A:190-289) Neural cell adhesion molecule (NCAM)
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 100
Score = 35.6 bits (81), Expect = 6e-05
Identities = 9/43 (20%), Positives = 23/43 (53%)
Query: 19 IVNVPYNTKLSIVDILRKNSGVYRIKAENASGKDEADVEITVL 61
+ +++L+I ++ + + Y AEN +G+ +A + + V
Sbjct: 56 HIFSDDSSELTIRNVDKNDEAEYVCIAENKAGEQDASIHLKVF 98
>d2fdbp2 b.1.1.4 (P:2252-2360) Fibroblast growth factor receptor,
FGFR {Human (Homo sapiens), FGFR1 [TaxId: 9606]}
Length = 109
Score = 35.7 bits (81), Expect = 6e-05
Identities = 10/49 (20%), Positives = 18/49 (36%)
Query: 13 SEGNVEIVNVPYNTKLSIVDILRKNSGVYRIKAENASGKDEADVEITVL 61
+ L I ++ +++G Y A N+ G +TVL
Sbjct: 61 LKAAGVNTTDKEIEVLYIRNVTFEDAGEYTCLAGNSIGISFHSAWLTVL 109
>d3dara1 b.1.1.4 (A:153-249) Fibroblast growth factor receptor,
FGFR {Human (Homo sapiens), FGFR2a [TaxId: 9606]}
Length = 97
Score = 34.8 bits (79), Expect = 1e-04
Identities = 7/37 (18%), Positives = 14/37 (37%)
Query: 25 NTKLSIVDILRKNSGVYRIKAENASGKDEADVEITVL 61
+ L + ++ + G Y EN G + V+
Sbjct: 61 HWSLIMESVVPSDKGNYTCVVENEYGSINHTYHLDVV 97
>d2avga1 b.1.1.4 (A:1-110) Cardiac myosin binding protein C,
different domains {Human (Homo sapiens) [TaxId: 9606]}
Length = 110
Score = 33.9 bits (76), Expect = 3e-04
Identities = 10/60 (16%), Positives = 22/60 (36%)
Query: 1 MFDIFCPRSQVRSEGNVEIVNVPYNTKLSIVDILRKNSGVYRIKAENASGKDEADVEITV 60
+ ++ + + + Y +L I D +G YR + D ++ +TV
Sbjct: 47 VDLSSKVGQHLQLHDSYDRASKVYLFELHITDAQPAFTGGYRCEVSTKDKFDCSNFNLTV 106
>d1wwca_ b.1.1.4 (A:) NT3 binding domain of trkC receptor {Human
(Homo sapiens) [TaxId: 9606]}
Length = 105
Score = 33.8 bits (76), Expect = 3e-04
Identities = 9/61 (14%), Positives = 15/61 (24%)
Query: 1 MFDIFCPRSQVRSEGNVEIVNVPYNTKLSIVDILRKNSGVYRIKAENASGKDEADVEITV 60
+ + R L N+G Y + A+N G +
Sbjct: 37 LHNGQPLRESKIIHVEYYQEGEISEGCLLFNKPTHYNNGNYTLIAKNPLGTANQTINGHF 96
Query: 61 L 61
L
Sbjct: 97 L 97
>d1cs6a4 b.1.1.4 (A:300-388) Axonin-1 {Chicken (Gallus gallus)
[TaxId: 9031]}
Length = 89
Score = 32.9 bits (74), Expect = 5e-04
Identities = 12/37 (32%), Positives = 20/37 (54%)
Query: 24 YNTKLSIVDILRKNSGVYRIKAENASGKDEADVEITV 60
+L ++ ++SG+Y+ AEN G A E+TV
Sbjct: 51 SGGELRFSKLVLEDSGMYQCVAENKHGTVYASAELTV 87
>d3b5ha1 b.1.1.4 (A:103-203) Cervical EMMPRIN {Human (Homo sapiens)
[TaxId: 9606]}
Length = 101
Score = 33.1 bits (74), Expect = 5e-04
Identities = 11/57 (19%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Query: 5 FCPRSQVRSEGNVEIVNVPYNTKLSIVDILRK-NSGVYRIKAENASGKDEADVEITV 60
SE + + ++L I ++ + + G YR ++ G D+A + + V
Sbjct: 44 EDKALMNGSESRFFVSSSQGRSELHIENLNMEADPGQYRCNGTSSKGSDQAIITLRV 100
>d1koaa1 b.1.1.4 (A:6265-6361) Twitchin {Nematode (Caenorhabditis
elegans) [TaxId: 6239]}
Length = 97
Score = 32.6 bits (73), Expect = 8e-04
Identities = 10/60 (16%), Positives = 23/60 (38%)
Query: 1 MFDIFCPRSQVRSEGNVEIVNVPYNTKLSIVDILRKNSGVYRIKAENASGKDEADVEITV 60
+ +++ + L+I + + G Y ++A+N+ G E V + V
Sbjct: 32 VVTWHKDDRELKQSVKYMKRYNGNDYGLTINRVKGDDKGEYTVRAKNSYGTKEEIVFLNV 91
>d1cs6a3 b.1.1.4 (A:209-299) Axonin-1 {Chicken (Gallus gallus)
[TaxId: 9031]}
Length = 91
Score = 32.5 bits (73), Expect = 9e-04
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 28 LSIVDILRKNSGVYRIKAENASGKDEADVEITV 60
L I ++ ++ G Y +AEN G+D I +
Sbjct: 57 LHIQNVDFEDEGTYECEAENIKGRDTYQGRIII 89
>d2dava1 b.1.1.4 (A:8-120) Myosin-binding protein C, slow-type
{Human (Homo sapiens) [TaxId: 9606]}
Length = 113
Score = 32.3 bits (72), Expect = 0.001
Identities = 8/49 (16%), Positives = 18/49 (36%)
Query: 12 RSEGNVEIVNVPYNTKLSIVDILRKNSGVYRIKAENASGKDEADVEITV 60
+ + E + Y ++ I+ +G YR + D ++ V
Sbjct: 54 QLKETFERHSRVYTFEMQIIKAKDNFAGNYRCEVTYKDKFDSCSFDLEV 102
>d1f97a1 b.1.1.1 (A:27-128) Junction adhesion molecule, JAM,
N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Length = 102
Score = 32.4 bits (72), Expect = 0.001
Identities = 8/63 (12%), Positives = 21/63 (33%)
Query: 1 MFDIFCPRSQVRSEGNVEIVNVPYNTKLSIVDILRKNSGVYRIKAENASGKDEADVEITV 60
+ ++ ++ + RK++G Y G++ +V I +
Sbjct: 40 GSTTALVCYNSQITAPYADRVTFSSSGITFSSVTRKDNGEYTCMVSEEGGQNYGEVSIHL 99
Query: 61 LIL 63
+L
Sbjct: 100 TVL 102
>d1tnna_ b.1.1.4 (A:) Titin {Human (Homo sapiens), different
modules [TaxId: 9606]}
Length = 91
Score = 31.8 bits (71), Expect = 0.001
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 32 DILRKNSGVYRIKAENASGKDEADVEITV 60
+ + G Y + EN+ GK EA+ +T+
Sbjct: 61 SVQASDEGNYSVVVENSEGKQEAEFTLTI 89
>d1pkoa_ b.1.1.1 (A:) Myelin oligodendrocyte glycoprotein (MOG) {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 126
Score = 31.9 bits (71), Expect = 0.002
Identities = 10/36 (27%), Positives = 17/36 (47%)
Query: 25 NTKLSIVDILRKNSGVYRIKAENASGKDEADVEITV 60
L I ++ + G Y + S ++EA VE+ V
Sbjct: 80 KVALRIQNVRFSDEGGYTCFFRDHSYQEEAAVELKV 115
>d1fhga_ b.1.1.4 (A:) Telokin {Turkey (Meleagris gallopavo)
[TaxId: 9103]}
Length = 102
Score = 31.4 bits (70), Expect = 0.002
Identities = 7/29 (24%), Positives = 13/29 (44%)
Query: 32 DILRKNSGVYRIKAENASGKDEADVEITV 60
++ + Y KA N+ G+ E+ V
Sbjct: 71 EVCGDDDAKYTCKAVNSLGEATCTAELLV 99
>d1nbqa1 b.1.1.1 (A:25-129) Junction adhesion molecule, JAM,
N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 105
Score = 31.3 bits (69), Expect = 0.003
Identities = 8/63 (12%), Positives = 22/63 (34%)
Query: 1 MFDIFCPRSQVRSEGNVEIVNVPYNTKLSIVDILRKNSGVYRIKAENASGKDEADVEITV 60
+ + E T ++ + R+++G Y G +V++ +
Sbjct: 43 GDTTRLVCYNNKITASYEDRVTFLPTGITFKSVTREDTGTYTCMVSEEGGNSYGEVKVKL 102
Query: 61 LIL 63
++L
Sbjct: 103 IVL 105
>d1eaja_ b.1.1.1 (A:) Coxsackie virus and adenovirus receptor (Car),
domain 1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 124
Score = 30.7 bits (68), Expect = 0.006
Identities = 7/35 (20%), Positives = 18/35 (51%)
Query: 28 LSIVDILRKNSGVYRIKAENASGKDEADVEITVLI 62
+++ ++ + G Y+ K + A G + + VL+
Sbjct: 90 INVTNLQLSDIGTYQCKVKKAPGVANKKIHLVVLV 124
>d1g1ca_ b.1.1.4 (A:) Titin {Human (Homo sapiens), different
modules [TaxId: 9606]}
Length = 98
Score = 30.2 bits (67), Expect = 0.007
Identities = 7/29 (24%), Positives = 15/29 (51%)
Query: 32 DILRKNSGVYRIKAENASGKDEADVEITV 60
D+ ++S +KA N +G+ + + V
Sbjct: 67 DVTGEDSASIMVKAINIAGETSSHAFLLV 95
>d2oz4a3 b.1.1.4 (A:367-450) Intercellular adhesion molecule-1,
ICAM-1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 84
Score = 29.6 bits (65), Expect = 0.010
Identities = 9/32 (28%), Positives = 15/32 (46%)
Query: 30 IVDILRKNSGVYRIKAENASGKDEADVEITVL 61
V + R G Y +A + G+ +V + VL
Sbjct: 51 SVTVTRDLEGTYLCRARSTQGEVTREVTVNVL 82
>d1f97a2 b.1.1.4 (A:129-238) Junction adhesion molecule, JAM,
C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Length = 110
Score = 29.2 bits (64), Expect = 0.015
Identities = 11/61 (18%), Positives = 22/61 (36%)
Query: 7 PRSQVRSEGNVEIVNVPYNTKLSIVDILRKNSGVYRIKAENASGKDEADVEITVLILKEN 66
+ R+ N P + L + +SG Y +A+N G + ++ N
Sbjct: 48 DAKKTRAFMNSSFTIDPKSGDLIFDPVTAFDSGEYYCQAQNGYGTAMRSEAAHMDAVELN 107
Query: 67 I 67
+
Sbjct: 108 V 108
>d2nxyb2 b.1.1.3 (B:1098-1181) CD4 C2-set domains {Human (Homo
sapiens) [TaxId: 9606]}
Length = 84
Score = 28.9 bits (63), Expect = 0.016
Identities = 7/27 (25%), Positives = 12/27 (44%)
Query: 35 RKNSGVYRIKAENASGKDEADVEITVL 61
++SG + K E ++I VL
Sbjct: 54 LQDSGTWTCTVLQNQKKVEFKIDIVVL 80
>d1wiua_ b.1.1.4 (A:) Twitchin {Nematode (Caenorhabditis elegans)
[TaxId: 6239]}
Length = 93
Score = 28.4 bits (62), Expect = 0.027
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 24 YNTKLSIVDILRKNSGVYRIKAENASGKDEADVEITV 60
T + R +SG Y++K +N G+DEA E+ V
Sbjct: 56 STTSIFFPSAKRADSGNYKLKVKNELGEDEAIFEVIV 92
>d1gl4b_ b.1.1.4 (B:) Perlecan Ig3 domain {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 89
Score = 28.4 bits (62), Expect = 0.028
Identities = 8/40 (20%), Positives = 17/40 (42%)
Query: 21 NVPYNTKLSIVDILRKNSGVYRIKAENASGKDEADVEITV 60
+ +N L+I ++ ++G Y N D+ + V
Sbjct: 49 AMDFNGILTIRNVQPSDAGTYVCTGSNMFAMDQGTATLHV 88
>d1gsma1 b.1.1.4 (A:1-90) Mucosal addressin cell adhesion
molecule-1 (MADCAM-1) {Human (Homo sapiens) [TaxId:
9606]}
Length = 90
Score = 28.1 bits (61), Expect = 0.038
Identities = 4/38 (10%), Positives = 12/38 (31%)
Query: 23 PYNTKLSIVDILRKNSGVYRIKAENASGKDEADVEITV 60
+ L++ + +G + V++ V
Sbjct: 52 TGRSVLTVRNASLSAAGTRVCVGSCGGRTFQHTVQLLV 89
>d1epfa2 b.1.1.4 (A:98-189) Neural cell adhesion molecule (NCAM)
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 92
Score = 28.0 bits (61), Expect = 0.038
Identities = 7/33 (21%), Positives = 15/33 (45%)
Query: 30 IVDILRKNSGVYRIKAENASGKDEADVEITVLI 62
I I + + G YR + + + +I V++
Sbjct: 60 IRGIKKTDEGTYRCEGRILARGEINFKDIQVIV 92
>d1iray1 b.1.1.4 (Y:1-101) Type-1 interleukin-1 receptor {Human
(Homo sapiens) [TaxId: 9606]}
Length = 101
Score = 28.0 bits (61), Expect = 0.046
Identities = 8/39 (20%), Positives = 14/39 (35%)
Query: 23 PYNTKLSIVDILRKNSGVYRIKAENASGKDEADVEITVL 61
+ KL V ++SG Y N+S + +
Sbjct: 56 QHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKFV 94
>d1wwbx_ b.1.1.4 (X:) Ligand binding domain of trkB receptor
{Human (Homo sapiens) [TaxId: 9606]}
Length = 103
Score = 28.0 bits (61), Expect = 0.050
Identities = 11/44 (25%), Positives = 20/44 (45%)
Query: 18 EIVNVPYNTKLSIVDILRKNSGVYRIKAENASGKDEADVEITVL 61
+ Y+ L + + N+G Y + A+N GKDE + +
Sbjct: 54 VTNHTEYHGCLQLDNPTHMNNGDYTLIAKNEYGKDEKQISAHFM 97
>d1x44a1 b.1.1.4 (A:8-97) Myosin-binding protein C, slow-type
{Human (Homo sapiens) [TaxId: 9606]}
Length = 90
Score = 27.5 bits (60), Expect = 0.060
Identities = 5/40 (12%), Positives = 11/40 (27%)
Query: 18 EIVNVPYNTKLSIVDILRKNSGVYRIKAENASGKDEADVE 57
I L I + ++ Y + + V+
Sbjct: 49 RIRVEGKKHILIIEGATKADAAEYSVMTTGGQSSAKLSVD 88
>d1rhfa1 b.1.1.1 (A:7-97) Tyrosine-protein kinase receptor tyro3,
N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 91
Score = 27.2 bits (59), Expect = 0.071
Identities = 9/38 (23%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Query: 24 YNTKLSIVDILRKNSGVYRIKAENASGKDEAD-VEITV 60
+ LS+ + R ++G Y + E+ + + V +TV
Sbjct: 52 WIGFLSLKSVERSDAGRYWCQVEDGGETEISQPVWLTV 89
>d1ccza1 b.1.1.1 (A:1-93) CD2-binding domain of CD58, N-terminal
domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 93
Score = 27.2 bits (59), Expect = 0.072
Identities = 6/37 (16%), Positives = 17/37 (45%), Gaps = 2/37 (5%)
Query: 25 NTKLSIVDILRKNSGVYRIKAENASGKDEADVEITVL 61
+ L+I ++ + Y +++ N + + + VL
Sbjct: 59 SGSLTIYNLTSSDEDEYEMESPNITDTMKFFL--YVL 93
>d1hnga1 b.1.1.1 (A:2-99) CD2, first domain {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 98
Score = 27.4 bits (60), Expect = 0.076
Identities = 9/36 (25%), Positives = 18/36 (50%)
Query: 28 LSIVDILRKNSGVYRIKAENASGKDEADVEITVLIL 63
L I ++ R +SG Y + + +G + + + IL
Sbjct: 62 LKIKNLTRDDSGTYNVTVYSTNGTRILNKALDLRIL 97
>d2crya1 b.1.1.1 (A:8-122) Kin of IRRE-like protein 3, KIRREL3
{Human (Homo sapiens) [TaxId: 9606]}
Length = 115
Score = 27.4 bits (59), Expect = 0.089
Identities = 9/34 (26%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 28 LSIVDILRK-NSGVYRIKAENASGKDEADVEITV 60
L+I +I+R +Y A N+ G D + +
Sbjct: 71 LTISNIVRADFQTIYNCTAWNSFGSDTEIIRLKE 104
>d1vcaa2 b.1.1.4 (A:1-90) Vascular cell adhesion molecule-1
(VCAM-1) {Human (Homo sapiens) [TaxId: 9606]}
Length = 90
Score = 26.3 bits (56), Expect = 0.17
Identities = 7/37 (18%), Positives = 15/37 (40%)
Query: 24 YNTKLSIVDILRKNSGVYRIKAENASGKDEADVEITV 60
+ L++ + N Y A S K E +++ +
Sbjct: 52 TTSTLTMNPVSFGNEHSYLCTATCESRKLEKGIQVEI 88
>d2ifga1 b.1.1.4 (A:192-283) High affinity nerve growth factor
receptor TrkA, different domains {Human (Homo sapiens)
[TaxId: 9606]}
Length = 92
Score = 26.2 bits (56), Expect = 0.19
Identities = 7/21 (33%), Positives = 10/21 (47%)
Query: 40 VYRIKAENASGKDEADVEITV 60
AEN G+ E V++ V
Sbjct: 71 NVTCWAENDVGRAEVSVQVNV 91
>d1biha2 b.1.1.4 (A:99-209) Hemolin {Moth (Hyalophora cecropia)
[TaxId: 7123]}
Length = 111
Score = 26.2 bits (56), Expect = 0.25
Identities = 7/29 (24%), Positives = 13/29 (44%), Gaps = 2/29 (6%)
Query: 37 NSGVYRIKAENASGKDEADVEITVLILKE 65
+ Y A+NA+ +E V + +K
Sbjct: 77 DIYKYVCTAKNAAVDEE--VVLVEYEIKG 103
>d2c9aa1 b.1.1.4 (A:184-279) Receptor-type tyrosine-protein
phosphatase mu {Human (Homo sapiens) [TaxId: 9606]}
Length = 96
Score = 25.8 bits (55), Expect = 0.29
Identities = 7/57 (12%), Positives = 20/57 (35%), Gaps = 1/57 (1%)
Query: 5 FCPRSQVRSEGNVEIVNVPYNTKLSIVDILRKNSGVYRIKAENASGKDEAD-VEITV 60
+ + + ++V+ ++++G YR G ++ E+ V
Sbjct: 39 GIDVRDAPLKEIKVTSSRRFIASFNVVNTTKRDAGKYRCMIRTEGGVGISNYAELVV 95
>d1iray2 b.1.1.4 (Y:102-204) Type-1 interleukin-1 receptor {Human
(Homo sapiens) [TaxId: 9606]}
Length = 103
Score = 24.8 bits (53), Expect = 0.66
Identities = 5/39 (12%), Positives = 14/39 (35%)
Query: 22 VPYNTKLSIVDILRKNSGVYRIKAENASGKDEADVEITV 60
+L ++++ K+ G Y A + + +
Sbjct: 54 SGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVI 92
>d1pd6a_ b.1.1.4 (A:) Cardiac myosin binding protein C, different
domains {Human (Homo sapiens) [TaxId: 9606]}
Length = 94
Score = 24.4 bits (52), Expect = 0.79
Identities = 5/34 (14%), Positives = 9/34 (26%)
Query: 24 YNTKLSIVDILRKNSGVYRIKAENASGKDEADVE 57
L+I + Y+ E V+
Sbjct: 60 AKRTLTISQCSLADDAAYQCVVGGEKCSTELFVK 93
>d1iama1 b.1.1.3 (A:83-185) Intercellular cell adhesion molecule-1
(ICAM-1) {Human (Homo sapiens) [TaxId: 9606]}
Length = 103
Score = 24.4 bits (52), Expect = 0.82
Identities = 2/38 (5%), Positives = 10/38 (26%)
Query: 23 PYNTKLSIVDILRKNSGVYRIKAENASGKDEADVEITV 60
P +++ + + + E ++
Sbjct: 57 PAEVTTTVLVRRDHHGAQFSCRTELDLRPQGLELFENT 94
>d1cs6a1 b.1.1.4 (A:7-103) Axonin-1 {Chicken (Gallus gallus)
[TaxId: 9031]}
Length = 97
Score = 24.5 bits (52), Expect = 0.97
Identities = 7/32 (21%), Positives = 13/32 (40%)
Query: 20 VNVPYNTKLSIVDILRKNSGVYRIKAENASGK 51
+ + + K++G Y+ A NA G
Sbjct: 56 YRLVAGDLVISNPVKAKDAGSYQCVATNARGT 87
>d1fnla1 b.1.1.4 (A:3-86) Fc gamma receptor ectodomain (CD32)
{Human (Homo sapiens), III [TaxId: 9606]}
Length = 84
Score = 24.1 bits (51), Expect = 1.2
Identities = 8/31 (25%), Positives = 14/31 (45%), Gaps = 2/31 (6%)
Query: 30 IVDILRKNSGVYRIKAENASGKDEADVEITV 60
I +SG YR + ++ D V++ V
Sbjct: 56 IDAATVNDSGEYRCQTNLSTLSDP--VQLEV 84
>d1bifa2 c.60.1.4 (A:250-468)
6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase,
phosphatase domain {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 219
Score = 24.5 bits (52), Expect = 1.3
Identities = 10/61 (16%), Positives = 24/61 (39%), Gaps = 6/61 (9%)
Query: 1 MFDIFCPRSQVRSEGNVEIVNVPYNTKLSIVDILRKNSGVYRIKAENASGKDEA-DVEIT 59
+ + CP V +++ V Y K+ + + +R + +N + + +T
Sbjct: 160 LPYLKCPLHTV-----LKLTPVAYGCKVESIFLNVAAVNTHRDRPQNVDISRPSEEALVT 214
Query: 60 V 60
V
Sbjct: 215 V 215
>d1neua_ b.1.1.1 (A:) Myelin membrane adhesion molecule P0 {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 119
Score = 23.7 bits (50), Expect = 1.7
Identities = 4/37 (10%), Positives = 16/37 (43%)
Query: 28 LSIVDILRKNSGVYRIKAENASGKDEADVEITVLILK 64
+ I ++ ++G + +N ++T+ + +
Sbjct: 83 IVIHNLDYSDNGTFTCDVKNPPDIVGKTSQVTLYVFE 119
>d2c0ga2 c.47.1.7 (A:1024-1145) Windbeutel, N-terminal domain {Fruit
fly (Drosophila melanogaster) [TaxId: 7227]}
Length = 122
Score = 23.5 bits (50), Expect = 2.1
Identities = 7/38 (18%), Positives = 15/38 (39%), Gaps = 3/38 (7%)
Query: 7 PRSQVRSEGNVEIVNVPYN---TKLSIVDILRKNSGVY 41
P + E V +P + T ++ + N+ +Y
Sbjct: 83 PSIFLFKGNADEYVQLPSHVDVTLDNLKAFVSANTPLY 120
>d3efza1 a.118.7.1 (A:46-268) 14-3-3 protein cgd1_2980
{Cryptosporidium parvum [TaxId: 5807]}
Length = 223
Score = 23.7 bits (51), Expect = 2.4
Identities = 5/35 (14%), Positives = 15/35 (42%)
Query: 22 VPYNTKLSIVDILRKNSGVYRIKAENASGKDEADV 56
+ Y+ + + ++ + R KAE +++
Sbjct: 88 LMYSEEGARAFCIKLKGDLMRYKAEILKDEEKNQC 122
>d1hnfa1 b.1.1.1 (A:4-104) CD2, first domain {Human (Homo sapiens)
[TaxId: 9606]}
Length = 101
Score = 22.9 bits (49), Expect = 2.9
Identities = 7/40 (17%), Positives = 17/40 (42%)
Query: 25 NTKLSIVDILRKNSGVYRIKAENASGKDEADVEITVLILK 64
N L I + + +Y++ + GK+ + + I +
Sbjct: 62 NGTLKIKHLKTDDQDIYKVSIYDTKGKNVLEKIFDLKIQE 101
>d2cr9a1 d.297.1.1 (A:8-133) Poly [ADP-ribose] polymerase-1,
PARP-1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 126
Score = 22.9 bits (49), Expect = 4.3
Identities = 9/47 (19%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Query: 7 PRSQVRSEGNV-EIVNVPYNTKLSIVDILRKNSGVYRIKAENASGKD 52
P S + +V E ++ L +VDI++ + Y+++ ++
Sbjct: 18 PDSGLEHSAHVLEKGGKVFSATLGLVDIVKGTNSYYKLQLLEDDKEN 64
>d1x5za1 b.1.2.1 (A:8-109) Receptor-type tyrosine-protein
phosphatase delta, PTPRD {Human (Homo sapiens) [TaxId:
9606]}
Length = 102
Score = 22.8 bits (48), Expect = 4.4
Identities = 7/48 (14%), Positives = 18/48 (37%)
Query: 13 SEGNVEIVNVPYNTKLSIVDILRKNSGVYRIKAENASGKDEADVEITV 60
G + + + T + + + +R+ A + G + EI+
Sbjct: 50 EHGEEQRITIEPGTSYRLQGLKPNSLYYFRLAARSPQGLGASTAEISA 97
>d1d0xa2 c.37.1.9 (A:2-33,A:80-759) Myosin S1, motor domain
{Dictyostelium discoideum [TaxId: 44689]}
Length = 712
Score = 22.7 bits (48), Expect = 5.7
Identities = 12/68 (17%), Positives = 26/68 (38%), Gaps = 7/68 (10%)
Query: 1 MFDIFCPRSQVRSEGNVEIVNVP---YNTKLSIVDILRKNSGVYRIKAENASGKDEADVE 57
+ Q+R G +E + + + ++ D +++ Y + A N E +
Sbjct: 619 KLEDKVVLDQLRCNGVLEGIRITRKGFPNRIIYADFVKR----YYLLAPNVPRDAEDSQK 674
Query: 58 ITVLILKE 65
T +LK
Sbjct: 675 ATDAVLKH 682
>d1br2a2 c.37.1.9 (A:80-789) Myosin S1, motor domain {Chicken
(Gallus gallus), pectoral muscle [TaxId: 9031]}
Length = 710
Score = 22.8 bits (48), Expect = 5.7
Identities = 14/69 (20%), Positives = 28/69 (40%), Gaps = 8/69 (11%)
Query: 1 MFDIFCPRSQVRSEGNVEIVNVP---YNTKLSIVDILRKNSGVYRIKAENASGKDEADV- 56
D Q+R G +E + + + ++ + ++ Y I A NA K D
Sbjct: 616 KLDAHLVLEQLRCNGVLEGIRICRQGFPNRIVFQEFRQR----YEILAANAIPKGFMDGK 671
Query: 57 EITVLILKE 65
+ +L++K
Sbjct: 672 QACILMIKA 680
>d1ikop_ b.6.1.5 (P:) Ephrin-b2 ectodomain {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 141
Score = 22.5 bits (48), Expect = 5.9
Identities = 6/16 (37%), Positives = 9/16 (56%)
Query: 3 DIFCPRSQVRSEGNVE 18
DI CP+ ++ G E
Sbjct: 33 DIICPKVDSKTVGQYE 48
>d1f9aa_ c.26.1.3 (A:) Nicotinamide mononucleotide (NMN)
adenylyltransferase {Archaeon Methanococcus jannaschii
[TaxId: 2190]}
Length = 164
Score = 22.1 bits (46), Expect = 6.7
Identities = 5/16 (31%), Positives = 13/16 (81%)
Query: 29 SIVDILRKNSGVYRIK 44
++VD++++ GV R++
Sbjct: 146 AVVDVIKEIKGVERLR 161
>d1lkxa_ c.37.1.9 (A:) Myosin S1, motor domain {Dictyostelium
discoideum, class-I myosin MyoE [TaxId: 44689]}
Length = 684
Score = 22.3 bits (47), Expect = 7.9
Identities = 14/69 (20%), Positives = 26/69 (37%), Gaps = 8/69 (11%)
Query: 1 MFDIFCPRSQVRSEGNVEIVNVP---YNTKLSIVDILRKNSGVYRIKAENASGKDEADV- 56
+ D R QVR G +E V V + ++ + Y++ +
Sbjct: 590 VIDEDRVRHQVRYLGLLENVRVRRAGFAGRIEYTRFYNR----YKMLCKKTWPSFNGTAK 645
Query: 57 EITVLILKE 65
+ T LIL++
Sbjct: 646 QATELILQQ 654
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.316 0.135 0.367
Gapped
Lambda K H
0.267 0.0614 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 236,972
Number of extensions: 8849
Number of successful extensions: 91
Number of sequences better than 10.0: 1
Number of HSP's gapped: 91
Number of HSP's successfully gapped: 59
Length of query: 68
Length of database: 2,407,596
Length adjustment: 37
Effective length of query: 31
Effective length of database: 1,899,586
Effective search space: 58887166
Effective search space used: 58887166
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 47 (22.1 bits)