RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy7045
(182 letters)
>1zl9_A GST class-sigma, glutathione S-transferase 5; glutathione
transferase, C.elegans; HET: GSH; 2.01A {Caenorhabditis
elegans}
Length = 207
Score = 35.4 bits (82), Expect = 0.005
Identities = 13/82 (15%), Positives = 28/82 (34%), Gaps = 6/82 (7%)
Query: 58 EDLKLKESYILAEAEACISHLATRLDRTPGPYFFGPSPSSLDALVFAYLGPLLKAP--LK 115
+ LK+ L E L L + + G S + +D + + L+
Sbjct: 118 DVETLKKDIFLPAFEKFYGFLVNFLKASGSGFLVGDSLTWIDLAIAQHSADLIAKGGDFS 177
Query: 116 N----NAFQNHVRAQPNLARFV 133
A ++A P + +++
Sbjct: 178 KFPELKAHAEKIQAIPQIKKWI 199
>2on5_A Nagst-2, Na glutathione S-transferase 2; hookworm; HET: GSH; 1.90A
{Necator americanus}
Length = 206
Score = 34.3 bits (79), Expect = 0.012
Identities = 16/93 (17%), Positives = 32/93 (34%), Gaps = 19/93 (20%)
Query: 54 HPEVEDLKLKESYILAEAEACISHLATRLDRTPGPYFFGPSPSSLDALVFAYLG------ 107
+ + KL + +L E + L+++ Y G S + D + +
Sbjct: 112 VDQGDPEKLFKELLLPAREKFFGFMKKFLEKSKSGYLVGDSVTYADLCLAEHTSGIAAKF 171
Query: 108 -------PLLKAPLKNNAFQNHVRAQPNLARFV 133
P +K A VR+ P L +++
Sbjct: 172 PSIYDGFPEIK------AHAEKVRSIPALKKWI 198
>1tw9_A Glutathione S-transferase 2; 1.71A {Heligmosomoides polygyrus}
SCOP: a.45.1.1 c.47.1.5
Length = 206
Score = 32.8 bits (75), Expect = 0.037
Identities = 13/89 (14%), Positives = 29/89 (32%), Gaps = 19/89 (21%)
Query: 58 EDLKLKESYILAEAEACISHLATRLDRTPGPYFFGPSPSSLDALVFAYLG---------- 107
+ K K +L + + L + + G S +D LV ++
Sbjct: 116 DVDKPKTDVLLPARTKFLGFITKFLKKNSSGFLVGDKISWVDLLVAEHVADMTNRVPEYI 175
Query: 108 ---PLLKAPLKNNAFQNHVRAQPNLARFV 133
P +K A ++ P + +++
Sbjct: 176 EGFPEVK------AHMERIQQTPRIKKWI 198
>1yq1_A Glutathione S-transferase; nematoda, structural genomics, PSI,
protein structure initiative; 3.00A {Caenorhabditis
elegans}
Length = 208
Score = 31.9 bits (73), Expect = 0.063
Identities = 13/80 (16%), Positives = 28/80 (35%), Gaps = 7/80 (8%)
Query: 61 KLKESYILAEAEACISHLATRLDRTPGPYFFGPSPSSLDALVFAYLGPLLKAPLKN---- 116
K + + L + L L+++ + G + D +V L L L +
Sbjct: 121 KFRSEFFLPARNTYFNILNGLLEKSNSGFLIGSDITFADLVVVDNLLTLKNYGLFDESEF 180
Query: 117 ---NAFQNHVRAQPNLARFV 133
A + V + P + ++
Sbjct: 181 TKLAALREKVNSYPGIKEYI 200
>2on7_A Nagst-1, Na glutathione S-transferase 1; hookworm; 2.40A {Necator
americanus}
Length = 206
Score = 31.9 bits (73), Expect = 0.069
Identities = 17/92 (18%), Positives = 34/92 (36%), Gaps = 19/92 (20%)
Query: 55 PEVEDLKLKESYILAEAEACISHLATRLDRTPGPYFFGPSPSSLDALVFAYLG------- 107
E + +LK+ +L + + L ++P + G S + +D LV +
Sbjct: 113 REGDVEQLKKEVLLPARDKFFGFITKFLKKSPSGFLVGDSLTWVDLLVSEHNATMLTFVP 172
Query: 108 ------PLLKAPLKNNAFQNHVRAQPNLARFV 133
P +K +RA P L +++
Sbjct: 173 EFLEGYPEVK------EHMEKIRAIPKLKKWI 198
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 30.8 bits (69), Expect = 0.24
Identities = 24/156 (15%), Positives = 44/156 (28%), Gaps = 47/156 (30%)
Query: 50 ISVIHPEVEDLKL--KESYILAE--AEACISHLATRLDRTPGPYFFGPSPSSLDALVFAY 105
+++ H +E + L S+ +A E L + P++ LV +
Sbjct: 9 LTLSHGSLEHVLLVPTASFFIASQLQEQFNKILPEPTEGFAADD----EPTTPAELVGKF 64
Query: 106 LGPLLKAPLKNNAFQNHVRAQPNLARF--VLCICQNHFKKTY------------------ 145
LG + + + + +F VL +C F+ Y
Sbjct: 65 LG-----------YVSSLVEPSKVGQFDQVLNLCLTEFENCYLEGNDIHALAAKLLQEND 113
Query: 146 --QGKSKALLPVLYVPLTLPRACAAQPGPVCAVHMS 179
K+K L+ A P S
Sbjct: 114 TTLVKTKELIKNYI------TARIMAKRPFDKKSNS 143
>1b48_A GST, mgsta4-4, protein (glutathione S-transferase); subunit
cooperativity; HET: HAG GSH; 2.60A {Mus musculus} SCOP:
a.45.1.1 c.47.1.5 PDB: 1guk_A
Length = 221
Score = 30.1 bits (68), Expect = 0.32
Identities = 10/87 (11%), Positives = 24/87 (27%), Gaps = 7/87 (8%)
Query: 54 HPEVEDLKLKESYILAEAEACISHLATRLDRTPGPYFFGPSPSSLDALVFAYLGPLLKAP 113
E + + + L + G S D + + + +
Sbjct: 111 KTPKEKEESYDLILSRAKTRYFPVFEKILKDHGEAFLVGNQLSWADIQLLEAILMVEELS 170
Query: 114 ---LKN----NAFQNHVRAQPNLARFV 133
L + AF+ + P + +F+
Sbjct: 171 APVLSDFPLLQAFKTRISNIPTIKKFL 197
>2hnl_A Glutathione S-transferase 1; prostaglandin synthase, river BLI
onchocerca volvulus, immune modulation; HET: GSH; 2.00A
{Onchocerca volvulus}
Length = 225
Score = 29.7 bits (67), Expect = 0.48
Identities = 12/63 (19%), Positives = 20/63 (31%), Gaps = 5/63 (7%)
Query: 76 SHLATRLDRTPGPYFFGPSPSSLDALVFAYLGPLLKA-PLKN----NAFQNHVRAQPNLA 130
L + + G S D VF L L L+ +F N + P +
Sbjct: 155 GRYEKFLKESTTGHIVGNKVSVADLTVFNMLMTLDDEVKLEEYPQLASFVNKIGQMPGIK 214
Query: 131 RFV 133
++
Sbjct: 215 EWI 217
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 29.8 bits (66), Expect = 0.58
Identities = 22/190 (11%), Positives = 51/190 (26%), Gaps = 71/190 (37%)
Query: 14 DDINRMEITRPW-YWKQIPFPFHFYYPGKFERKAQALISVIHPEV------------EDL 60
D + W WK + K ++ ++V+ P
Sbjct: 339 DGLAT------WDNWKHVNCD-------KLTTIIESSLNVLEPAEYRKMFDRLSVFPPSA 385
Query: 61 KLKESYILA---------EAEACISHLATR--LDRTPGPYFFGPSPSSLDALVFAYLGPL 109
+ +L+ + ++ L +++ P S+ ++ YL
Sbjct: 386 HIPTI-LLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTI-----SIPSI---YL--E 434
Query: 110 LKAPLKNNAFQNH--VRAQPNLARFVLCICQN-----------------HFKKTYQGKSK 150
LK L+N H + N+ + + H K +
Sbjct: 435 LKVKLENEY-ALHRSIVDHYNIPK---TFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERM 490
Query: 151 ALLPVLYVPL 160
L ++++
Sbjct: 491 TLFRMVFLDF 500
>2inc_A Toluene, O-xylene monooxygenase oxygenase subunit; DIIRON, 4-helix
bundle, carboxylate bridge, metalloenzyme,
oxidoreductase; HET: P6G; 1.85A {Pseudomonas stutzeri}
SCOP: a.25.1.2 PDB: 2ind_A* 1t0q_A 1t0r_A 1t0s_A 3n1z_A*
3rnf_A* 3n20_A* 3rnc_A 3rn9_A* 3n1x_A 3rne_A 2rdb_A*
3n1y_A* 3rnb_A 3rng_A 3rna_A
Length = 491
Score = 28.9 bits (64), Expect = 1.2
Identities = 5/27 (18%), Positives = 14/27 (51%)
Query: 4 VTQQVQGRWVDDINRMEITRPWYWKQI 30
+ + + ++ + + + +PWYW Q
Sbjct: 293 MLEWIVAQFERQLLDLGLDKPWYWDQF 319
>2v66_B Nuclear distribution protein NUDE-like 1; structural protein,
developmental protein, structural protei
phosphorylation, transport, microtubule; 2.10A {Homo
sapiens}
Length = 111
Score = 27.6 bits (61), Expect = 1.2
Identities = 14/45 (31%), Positives = 21/45 (46%)
Query: 41 KFERKAQALISVIHPEVEDLKLKESYILAEAEACISHLATRLDRT 85
+ R QA + EVE LK K + A++ +S L L +T
Sbjct: 3 QRNRDLQADNQRLKYEVEALKEKLEHQYAQSYKQVSVLEDDLSQT 47
>3h1n_A Probable glutathione S-transferase; APC84167, bordetella
bronchisepti structural genomics, PSI-2, protein
structure initiative; 1.83A {Bordetella bronchiseptica
RB50}
Length = 252
Score = 28.3 bits (63), Expect = 1.3
Identities = 14/89 (15%), Positives = 25/89 (28%), Gaps = 11/89 (12%)
Query: 56 EVEDLKLKESYILAEAEACISHLATRLDRTPGPYFFGPSPSSLDALVFAYLGPLLKAPLK 115
+ L+ + + + LDR G S D ++ + LL A +
Sbjct: 142 QDVALRRAADFRETRMPKFMQYFEQALDRPGGWLTDMGRWSYADLSLYHVVEGLLHAFPR 201
Query: 116 NN-----------AFQNHVRAQPNLARFV 133
A V P L ++
Sbjct: 202 RMRTLVHRYPRLMALHARVAELPELRGYL 230
>1oe8_A Glutathione S-transferase; schistosomiasis, detoxifying enzyme,
prostaglandin D2 synthase, vaccine candidate; HET: GSH;
1.65A {Schistosoma haematobium} SCOP: a.45.1.1 c.47.1.5
PDB: 1oe7_A* 2c80_A* 2ca8_A* 2f8f_A* 2c8u_A 2caq_A*
2cai_A* 1u3i_A*
Length = 211
Score = 28.2 bits (63), Expect = 1.5
Identities = 14/93 (15%), Positives = 31/93 (33%), Gaps = 19/93 (20%)
Query: 55 PEVEDLKLKESYILAEAEACISHLATRLDRTPGPYFFGPSPSSLDALVFAYLG------- 107
PE E K+ + + + + + L + G G + D ++ A +
Sbjct: 116 PEEEKQKIIKEILNGKVPVLLDIICESLKASTGKLAVGDKVTLADLVLIAVIDHVTDLDK 175
Query: 108 -------PLLKAPLKNNAFQNHVRAQPNLARFV 133
P + + N + P LA+++
Sbjct: 176 EFLTGKYPEIHK-HRENLLASS----PRLAKYL 203
>2pvq_A Glutathione S-transferase; xenobiotics detoxification, H-site; HET:
GSH; 1.80A {Ochrobactrum anthropi} PDB: 2nto_A*
Length = 201
Score = 27.9 bits (63), Expect = 1.5
Identities = 11/65 (16%), Positives = 19/65 (29%), Gaps = 8/65 (12%)
Query: 69 AEAEACISHLATRLDRTPGPYFFGPSPSSLDALVFAYLGPLLKAPLKNNAFQNHVRAQPN 128
A + L L Y+ G + DA +G + L +A+ P
Sbjct: 126 ANINRRLGQLEAMLS-DKNAYWLGDDFTQPDAYASVIIGWGVGQKLDLSAY-------PK 177
Query: 129 LARFV 133
+
Sbjct: 178 ALKLR 182
>3udf_A Penicillin-binding protein 1A; transglycosylase, transpeptidase;
HET: MES; 1.70A {Acinetobacter baumannii} PDB: 3udi_A*
3udx_A* 3ue0_A* 3ue1_A*
Length = 731
Score = 28.4 bits (64), Expect = 1.6
Identities = 12/37 (32%), Positives = 16/37 (43%)
Query: 89 YFFGPSPSSLDALVFAYLGPLLKAPLKNNAFQNHVRA 125
++ S + L A + L KAP K N N RA
Sbjct: 155 IYYNKSINELSIAQMAMIAGLPKAPSKYNPVVNPERA 191
>3vln_A GSTO-1, glutathione S-transferase omega-1; GST fold, reductase;
HET: ASC; 1.70A {Homo sapiens} PDB: 1eem_A* 3lfl_A*
Length = 241
Score = 27.7 bits (62), Expect = 1.7
Identities = 12/71 (16%), Positives = 23/71 (32%), Gaps = 7/71 (9%)
Query: 42 FERKAQALISVIHPEVEDLKLKESYILAEAEACISHLATRLDRTPGPYFFGPSPSSLDAL 101
F + + S I + ++ + E + L L +F G S S +D
Sbjct: 120 FSKVPSLVGSFIRSQNKEDYAG---LKEEFRKEFTKLEEVLTNKKTTFFGGNSISMID-- 174
Query: 102 VFAYLGPLLKA 112
+ P +
Sbjct: 175 --YLIWPWFER 183
>1vf1_A Glutathione S-transferase 3; detoxification; HET: GSH; 1.77A
{Gallus gallus} PDB: 1vf2_A* 1vf3_A* 1vf4_A
Length = 229
Score = 27.9 bits (62), Expect = 1.7
Identities = 10/87 (11%), Positives = 24/87 (27%), Gaps = 7/87 (8%)
Query: 54 HPEVEDLKLKESYILAEAEACISHLATRLDRTPGPYFFGPSPSSLDALVFAYLGPLLKAP 113
+ +K + L + G S D + + + +
Sbjct: 112 LSAEDKVKQCAFVVEKATSRYFPAYEKVLKDHGQDFLVGNRLSWADIHLLEAILMVEEKK 171
Query: 114 ---LKN----NAFQNHVRAQPNLARFV 133
L AF+ + + P + +F+
Sbjct: 172 SDALSGFPLLQAFKKRISSIPTIKKFL 198
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas
putida} SCOP: c.67.1.1
Length = 356
Score = 27.9 bits (63), Expect = 1.8
Identities = 18/68 (26%), Positives = 27/68 (39%), Gaps = 4/68 (5%)
Query: 67 ILAEAEACISHLATRLDRTPGPYFFGPSPSSLDALVFAYLGPLLKAPLKNNAFQ-NHVRA 125
+A A LA L+ G G + ++ ++F L + L F H R
Sbjct: 265 NARKANAAAQRLAQGLEGLGGVEVLGGTEAN---ILFCRLDSAMIDALLKAGFGFYHDRW 321
Query: 126 QPNLARFV 133
PN+ RFV
Sbjct: 322 GPNVVRFV 329
>3ge3_A Toluene-4-monooxygenase system protein A; DIIRON hydroxylase,
effector protein, T201A, aromatic hydrocarbons
catabolism, FAD, flavoprotein; 1.52A {Pseudomonas
mendocina} PDB: 3ge8_A 3dhi_A* 3dhh_A* 3dhg_A* 3i5j_A
3i63_A 3q14_A 3q2a_A* 3q3m_A* 3q3n_A* 3q3o_A* 3rmk_A*
3ri7_A
Length = 500
Score = 28.1 bits (62), Expect = 1.9
Identities = 5/27 (18%), Positives = 14/27 (51%)
Query: 4 VTQQVQGRWVDDINRMEITRPWYWKQI 30
+ + + G++ + + + +PWYW
Sbjct: 294 MYEWIIGQFERSLIDLGLDKPWYWDLF 320
>1n2a_A Glutathione S-transferase; HET: GTS; 1.90A {Escherichia coli} SCOP:
a.45.1.1 c.47.1.5 PDB: 1a0f_A*
Length = 201
Score = 27.6 bits (62), Expect = 2.1
Identities = 11/67 (16%), Positives = 22/67 (32%), Gaps = 9/67 (13%)
Query: 67 ILAEAEACISHLATRLDRTPGPYFFGPSPSSLDALVFAYLGPLLKAPLKNNAFQNHVRAQ 126
+ A+ E + ++ L + G + DA +F L L
Sbjct: 125 VRAQLEKKLQYVNEALKD--EHWICGQRFTIADAYLFTVLRWAYAVKLNLEGL------- 175
Query: 127 PNLARFV 133
++A F+
Sbjct: 176 EHIAAFM 182
>3q18_A GSTO-2, glutathione S-transferase omega-2; glutathione transferase,
dehydroascorbate reductase, reductase; 1.70A {Homo
sapiens} PDB: 3q19_A* 3qag_A*
Length = 239
Score = 27.3 bits (61), Expect = 2.3
Identities = 11/42 (26%), Positives = 15/42 (35%), Gaps = 4/42 (9%)
Query: 69 AEAEACISHLATRLDRTPGPYFFGPSPSSLDALVFAYLGPLL 110
A S+L L+ +F G S S +D L P
Sbjct: 145 AALRQEFSNLEEILEYQNTTFFGGTSISMID----YLLWPWF 182
>2dsa_A Glutathione S-transferase; HET: GSH HPX; 2.10A {Burkholderia
xenovorans} PDB: 2gdr_A*
Length = 203
Score = 27.2 bits (61), Expect = 2.4
Identities = 15/71 (21%), Positives = 24/71 (33%), Gaps = 8/71 (11%)
Query: 67 ILAEAEACISHLATRLDRTPGPYFFGPSPSSLDALVFAYLG--PLLKAPLKN----NAFQ 120
+ + +A +L+ PY G S D +F LG + L AFQ
Sbjct: 125 VRQSLNTRLGQVARQLEH--APYLLGDQLSVADIYLFVVLGWSAYVNIDLSPWPSLQAFQ 182
Query: 121 NHVRAQPNLAR 131
V + +
Sbjct: 183 GRVGGREAVQS 193
>3rbt_A Glutathione transferase O1; glutathione S-transferase omega3; 2.20A
{Bombyx mori}
Length = 246
Score = 27.0 bits (60), Expect = 3.0
Identities = 9/69 (13%), Positives = 15/69 (21%), Gaps = 11/69 (15%)
Query: 42 FERKAQALISVIHPEVEDLKLKESYILAEAEACISHLATRLDRTPGPYFFGPSPSSLDAL 101
F + + + + L YF G P LD
Sbjct: 126 FNELIKGSLECFDTNFAFGS-------EQIIQTLEIFEKELTNRGTNYFGGNRPGMLD-- 176
Query: 102 VFAYLGPLL 110
+ P +
Sbjct: 177 --YMVWPWV 183
>1pmt_A PMGST, GST B1-1, glutathione transferase; glutathione-conjugating,
A putative oxidoreduct; HET: GSH; 2.50A {Proteus
mirabilis} SCOP: a.45.1.1 c.47.1.5 PDB: 2pmt_A*
Length = 203
Score = 26.8 bits (60), Expect = 4.1
Identities = 7/65 (10%), Positives = 18/65 (27%), Gaps = 9/65 (13%)
Query: 69 AEAEACISHLATRLDRTPGPYFFGPSPSSLDALVFAYLGPLLKAPLKNNAFQNHVRAQPN 128
+ ++ ++ L + G + DA +F L +
Sbjct: 127 NKLKSKFVYINDVLSK--QKCVCGDHFTVADAYLFTLSQWAPHVALDLTDL-------SH 177
Query: 129 LARFV 133
L ++
Sbjct: 178 LQDYL 182
>2ws2_A NU-class GST, glutathione S-transferase; parasite, nematode; 2.01A
{Haemonchus contortus}
Length = 204
Score = 26.2 bits (58), Expect = 5.2
Identities = 14/64 (21%), Positives = 22/64 (34%), Gaps = 7/64 (10%)
Query: 76 SHLATRLDRTPGPYFFGPSPSSLDALVFAYLGPLLKAP--LKN----NAFQNHVRAQPNL 129
+ + L Y G S + D L A +G P A VR+ P L
Sbjct: 134 TIVTKILKENKTGYLVGDSLTFAD-LYVAEMGFTEHYPKLYDGFPEVKAHAEKVRSNPKL 192
Query: 130 ARFV 133
+++
Sbjct: 193 KKWI 196
>1mty_D Methane monooxygenase hydroxylase; dinuclear iron center
monooxygenase; 1.70A {Methylococcus capsulatus str}
SCOP: a.25.1.2 PDB: 1mmo_D 1xvb_A 1fyz_A 1fz0_A 1fz2_A
1fz3_A 1fz4_A 1fz5_A 1fz6_A 1fz7_A 1fz8_A 1fz9_A 1fzh_A
1fzi_A 1xmf_A 1xmg_A 1xmh_A 1xu3_A 1xu5_A 1fz1_A ...
Length = 512
Score = 26.6 bits (58), Expect = 5.6
Identities = 5/27 (18%), Positives = 10/27 (37%)
Query: 4 VTQQVQGRWVDDINRMEITRPWYWKQI 30
V + G W+ + + + P K
Sbjct: 295 VYEDWGGIWIGRLGKYGVESPRSLKDA 321
>3uar_A Glutathione S-transferase; GSH binding site; HET: GSH; 2.60A
{Methylococcus capsulatus} PDB: 3uap_A*
Length = 227
Score = 26.1 bits (58), Expect = 5.8
Identities = 11/65 (16%), Positives = 23/65 (35%), Gaps = 8/65 (12%)
Query: 69 AEAEACISHLATRLDRTPGPYFFGPSPSSLDALVFAYLGPLLKAPLKNNAFQNHVRAQPN 128
+ ++ RL+ GP+ G S DA + LG + + + P
Sbjct: 129 GLLSRRLDYVEDRLEAG-GPWLMGDRYSVADAYLSTVLGWCEYLKIDLSKW-------PR 180
Query: 129 LARFV 133
+ ++
Sbjct: 181 ILAYL 185
>3fy7_A Chloride intracellular channel protein 3; GST, glutathione, CLIC,
chloride channel, ION transport, ionic channel, nucleus,
transport, gated channel; 1.95A {Homo sapiens} PDB:
3kjy_A
Length = 250
Score = 26.1 bits (57), Expect = 6.2
Identities = 15/93 (16%), Positives = 28/93 (30%), Gaps = 9/93 (9%)
Query: 14 DDINRMEITRPWYWKQIPFPFHFYYPGKFERKAQALISVIHPEVEDLKLKESYILAEAEA 73
+ K F + P + E Q L+ L +SY+ A E
Sbjct: 117 RYRESNTAGNDVFHKFSAFIKNPV-PAQDEALYQQLL-------RALARLDSYLRAPLEH 168
Query: 74 CISHLATRLDRTPGPYFFGPSPSSLDALVFAYL 106
++ +L + + G + D + L
Sbjct: 169 ELAGEP-QLRESRRRFLDGDRLTLADCSLLPKL 200
>2oqo_A Penicillin-binding protein 1A (PBP-1A) (PBP1A); transferase; HET:
EPE CPS; 2.10A {Aquifex aeolicus} SCOP: d.2.1.10 PDB:
3d3h_A* 3nb7_A 3nb6_A
Length = 200
Score = 26.0 bits (58), Expect = 7.0
Identities = 14/37 (37%), Positives = 16/37 (43%)
Query: 89 YFFGPSPSSLDALVFAYLGPLLKAPLKNNAFQNHVRA 125
+FG L A L L KAP K N F + RA
Sbjct: 136 VYFGKHVWELSLDEAALLAALPKAPAKYNPFYHPERA 172
>2x64_A Glutathione-S-transferase; detoxification enzyme; HET: GSH; 2.30A
{Xylella fastidiosa}
Length = 207
Score = 26.0 bits (58), Expect = 7.4
Identities = 8/65 (12%), Positives = 16/65 (24%), Gaps = 9/65 (13%)
Query: 69 AEAEACISHLATRLDRTPGPYFFGPSPSSLDALVFAYLGPLLKAPLKNNAFQNHVRAQPN 128
+ L + S DA ++ L K + ++
Sbjct: 133 QKLRVLYQRADAHLKH--HNWLANGQRSGADAYLYVTLRWAKKVGVDLSSL-------DA 183
Query: 129 LARFV 133
L+ F
Sbjct: 184 LSAFF 188
>4ags_A Thiol-dependent reductase 1; transferase, leishmaniasis,
DE-gluathionylation; HET: MSE GSH; 2.30A {Leishmania
infantum}
Length = 471
Score = 26.2 bits (58), Expect = 7.6
Identities = 9/44 (20%), Positives = 15/44 (34%), Gaps = 6/44 (13%)
Query: 69 AEAEACISHLATRLDR--TPGPYFFGPSPSSLDALVFAYLGPLL 110
+ +++ L T GPY+ + D L P L
Sbjct: 148 KAMDDNAAYVDGLLAANQTTGPYYCDGEFTMADVA----LVPFL 187
>1k0m_A CLIC1, NCC27, chloride intracellular channel protein 1;
glutathione-S-tranferase superfamily, chloride ION
channel, metal transport; 1.40A {Homo sapiens} SCOP:
a.45.1.1 c.47.1.5 PDB: 1k0n_A* 1k0o_A 1rk4_A 3uvh_A
3o3t_A 3p90_A 3qr6_A 3p8w_A 3tgz_A 3ma4_A 3swl_A
Length = 241
Score = 26.0 bits (57), Expect = 8.1
Identities = 8/54 (14%), Positives = 20/54 (37%), Gaps = 5/54 (9%)
Query: 58 EDLKLKESYILAEAEACISHLATRLDR-TPGPYFFGPSPSSLDALVFAYLGPLL 110
+ LK+ ++Y+ + + + + + + G + D L P L
Sbjct: 135 KALKVLDNYLTSPLPEGVDETSAEDEGVSQRKFLDGNELTLAD----CNLLPKL 184
>2cvd_A Glutathione-requiring prostaglandin D synthase;
glutathione-S-transferase, isomerase; HET: GSH HQL;
1.45A {Homo sapiens} SCOP: a.45.1.1 c.47.1.5 PDB:
1iyi_A* 1v40_A* 1iyh_A* 3vi5_A* 3vi7_A* 2vcq_A* 2vcw_A*
2vcx_A* 2vcz_A* 2vd0_A* 2vd1_A* 3kxo_A* 3ee2_A* 1pd2_1*
Length = 198
Score = 25.8 bits (57), Expect = 8.2
Identities = 11/54 (20%), Positives = 18/54 (33%), Gaps = 7/54 (12%)
Query: 87 GPYFFGPSPSSLDALVFAYLGPLLKAP---LKN----NAFQNHVRAQPNLARFV 133
+ G S + D LL L N + V+A P +A ++
Sbjct: 137 REWLIGMSVTWADFYWEICSTTLLVFKPDLLDNHPRLVTLRKKVQAIPAVANWI 190
>4g9h_A Glutathione S-transferase; GST, enzyme function initiative,
structural genomics; HET: GSH; 2.10A {Yersinia pestis}
Length = 211
Score = 25.6 bits (57), Expect = 9.1
Identities = 10/67 (14%), Positives = 21/67 (31%), Gaps = 9/67 (13%)
Query: 67 ILAEAEACISHLATRLDRTPGPYFFGPSPSSLDALVFAYLGPLLKAPLKNNAFQNHVRAQ 126
+ + S++ + L Y G S DA +F L+
Sbjct: 128 VRERLDKQFSYVDSVLAE--HDYLLGKKFSVADAYLFTVSRWANALNLQIKER------- 178
Query: 127 PNLARFV 133
+L +++
Sbjct: 179 SHLDQYM 185
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.324 0.139 0.448
Gapped
Lambda K H
0.267 0.0779 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 2,840,960
Number of extensions: 156422
Number of successful extensions: 405
Number of sequences better than 10.0: 1
Number of HSP's gapped: 396
Number of HSP's successfully gapped: 56
Length of query: 182
Length of database: 6,701,793
Length adjustment: 88
Effective length of query: 94
Effective length of database: 4,244,745
Effective search space: 399006030
Effective search space used: 399006030
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 54 (24.5 bits)