Query psy7047
Match_columns 469
No_of_seqs 227 out of 354
Neff 5.0
Searched_HMMs 29240
Date Fri Aug 16 16:45:57 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7047.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/7047hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1fo8_A Alpha-1,3-mannosyl-glyc 100.0 3.6E-93 1.2E-97 725.3 30.7 342 98-469 2-343 (343)
2 1qg8_A Protein (spore coat pol 99.1 4.6E-10 1.6E-14 104.8 12.2 190 99-306 2-213 (255)
3 3bcv_A Putative glycosyltransf 98.7 7.2E-08 2.5E-12 88.8 12.4 104 97-222 4-111 (240)
4 1xhb_A Polypeptide N-acetylgal 98.7 7.4E-08 2.5E-12 99.3 13.6 190 93-307 24-257 (472)
5 2z86_A Chondroitin synthase; G 98.6 2.1E-07 7.1E-12 99.1 12.1 180 97-303 374-568 (625)
6 2d7i_A Polypeptide N-acetylgal 98.5 4.1E-07 1.4E-11 97.2 11.2 188 95-307 109-337 (570)
7 2z86_A Chondroitin synthase; G 98.5 8.8E-07 3E-11 94.3 13.2 116 98-235 93-211 (625)
8 4fix_A UDP-galactofuranosyl tr 98.4 4.4E-07 1.5E-11 99.2 8.8 191 95-307 177-416 (657)
9 2ffu_A Ppgalnact-2, polypeptid 98.3 3.3E-06 1.1E-10 88.0 11.9 187 94-307 62-289 (501)
10 3l7i_A Teichoic acid biosynthe 98.2 1.5E-07 5.2E-12 102.9 0.0 179 98-302 2-201 (729)
11 3ckj_A Putative uncharacterize 98.1 1.3E-05 4.4E-10 79.3 11.4 121 97-235 47-169 (329)
12 4hg6_A Cellulose synthase subu 98.0 3.2E-05 1.1E-09 86.1 12.4 178 97-298 139-358 (802)
13 3f1y_A Mannosyl-3-phosphoglyce 97.9 3.7E-05 1.3E-09 78.9 9.6 121 97-235 93-217 (387)
14 2fy7_A Beta-1,4-galactosyltran 96.6 0.007 2.4E-07 59.6 9.9 148 97-302 64-222 (287)
15 2nxv_A ATP synthase subunits r 96.6 0.01 3.6E-07 56.0 10.5 98 97-234 15-114 (249)
16 2bo4_A Mannosylglycerate synth 94.3 0.18 6.1E-06 52.0 10.3 108 102-219 3-117 (397)
17 2wvl_A Mannosyl-3-phosphoglyce 89.6 2.2 7.6E-05 44.0 11.3 135 98-239 53-205 (391)
18 3tzt_A Glycosyl transferase fa 80.5 9.3 0.00032 36.8 10.3 113 97-217 3-122 (276)
19 1omz_A Alpha-1,4-N-acetylhexos 71.4 10 0.00035 37.7 7.9 95 99-217 29-128 (293)
20 1g9r_A Glycosyl transferase; a 71.2 15 0.00053 35.6 9.1 118 104-233 4-129 (311)
21 2zu9_A Mannosyl-3-phosphoglyce 55.3 82 0.0028 32.4 11.3 46 99-149 52-104 (394)
22 3k8d_A 3-deoxy-manno-octuloson 53.4 1E+02 0.0035 29.3 11.1 99 96-221 34-133 (264)
23 3oam_A 3-deoxy-manno-octuloson 49.3 1E+02 0.0034 28.6 10.1 98 96-220 18-116 (252)
24 3st8_A Bifunctional protein GL 33.0 1.4E+02 0.0048 30.6 9.0 112 105-236 36-152 (501)
25 3qle_A TIM50P; chaperone, mito 28.4 43 0.0015 31.2 3.7 41 105-151 57-97 (204)
26 3u2u_A Glycogenin-1, GN-1, GN1 24.5 3.1E+02 0.011 26.2 9.2 99 101-211 6-111 (263)
27 3tqd_A 3-deoxy-manno-octuloson 22.9 4.7E+02 0.016 24.4 10.6 98 96-220 25-123 (256)
28 3av3_A Phosphoribosylglycinami 22.5 3.4E+02 0.012 24.9 8.8 50 101-152 5-55 (212)
29 3s8f_C Cytochrome C oxidase po 20.7 68 0.0023 22.1 2.6 22 6-28 12-33 (34)
30 2hhl_A CTD small phosphatase-l 20.3 1.1E+02 0.0037 27.8 4.8 42 104-151 65-106 (195)
No 1
>1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A*
Probab=100.00 E-value=3.6e-93 Score=725.34 Aligned_cols=342 Identities=55% Similarity=1.053 Sum_probs=308.7
Q ss_pred CcceEEEEecCChhHHHHHHHHHhcCCCCCCCcEEEEeCCCChhHHHHHHhhhhcceEeecCCCCCccCCccccccccch
Q psy7047 98 DAIAIVVIACNRVTVSRCLDLLIKYRPSVEKFPIIVSQDCNHEATTNVIKSYQNQVHLIQQPNQQDIAVPPKEKKFKGYF 177 (469)
Q Consensus 98 ~~iPVlV~a~NRPdl~RtLesLlk~rp~~~~~~LiVsqDG~~~e~~~vv~~y~~~i~~i~~~d~~~i~~~~~~k~~~~y~ 177 (469)
+.+||||++||||+|++||+||++++|+.++++|+|++||+.+++++++++|+.++.+++|++.+.+...+.+.++.+|+
T Consensus 2 ~~~pViI~~yNRp~l~~~L~sL~~~~p~~~~~~iivsdDgs~~~~~~vi~~~~~~I~~~~~~d~~~~~~~~~N~g~~~y~ 81 (343)
T 1fo8_A 2 AVIPILVIACDRSTVRRCLDKLLHYRPSAELFPIIVSQDCGHEETAQVIASYGSAVTHIRQPDLSNIAVQPDHRKFQGYY 81 (343)
T ss_dssp CCCCEEEEESSCTTHHHHHHHHHHHCSCTTTSCEEEEECTTCHHHHHHHHTTGGGSEEEECSCCCCCCCCTTCGGGHHHH
T ss_pred CcccEEEEECCcHHHHHHHHHHHhcCCCcCCcEEEEEECCCCHHHHHHHHHcCCceEEEEcCCccccccchhhcCcccch
Confidence 46899999999999999999999999988889999999999999999999999889999998876655555555566799
Q ss_pred hhhhhHHHHHHHhhhhccccEEEEEccCcccCchHHHHHHhhhhhhcCCCCeeEEecCCCCCCCcccCCCCCcceeecCC
Q psy7047 178 KIARHYGWALNQMFYEFNFSTAIVIEDDLDIAPDFFEYFLGTYPLLISDPTLWCVSAWNDNGKPTLIDTSSSDLLYRTDF 257 (469)
Q Consensus 178 ~Ia~Hyk~aLs~vF~~~~~~~vIILEDDLvvSPDFf~Yf~~~L~ly~~D~sI~~ISAwNdnG~~~~vd~~d~~~lyRsdf 257 (469)
+||+||++||+++|+.++++++|||||||++|||||+||++++++|++|++|+||||||+||+...++..+++.+||++|
T Consensus 82 ~ia~h~~~al~~vf~~~~~~~vIiLEDDl~~spdF~~y~~~~l~~y~~D~~I~~ISa~n~~g~~~~~~~~~~~~lyrs~~ 161 (343)
T 1fo8_A 82 KIARHYRWALGQIFHNFNYPAAVVVEDDLEVAPDFFEYFQATYPLLKADPSLWCVSAWNDNGKEQMVDSSKPELLYRTDF 161 (343)
T ss_dssp HHHHHHHHHHHHHHTTSCCSEEEEEETTEEECTTHHHHHHHHHHHHHHCTTEEEEESCCTTCBGGGSCTTCTTCEEEESS
T ss_pred hHhHHHHHHHHHHHHhccCCEEEEEcCCCeECHHHHHHHHHHHHHhhcCCcEEEEecccCccccccccccCcceEEeecC
Confidence 99999999999999988999999999999999999999999999999999999999999999887765568899999999
Q ss_pred CCccccccchhhHHHhhcCCCCCCccchhccccccCCCceeeeCccccccccCCCCCcccccCCcccccccccccccccc
Q psy7047 258 FPGLGWMLTKDLWDEISVKWPRSYWDDWIRQPEQRKDRACIRPEISRTRTFSAGSISPVVTKLPMKVSFYTRTFGKIGVS 337 (469)
Q Consensus 258 fPglGWmtwrr~W~El~pkWP~~~WD~w~r~~~~r~gr~cI~PeisRt~~~s~~~~~~~~~~~ni~~~~~~~~fG~~g~s 337 (469)
||||||||||++|+|++++||..+||+|||++++++||+||+|++|||+ |||.+|+|
T Consensus 162 f~~wGWa~wr~~W~e~~~~wp~~~Wd~w~r~~~~~~~r~ci~P~vsrv~-----------------------n~G~~G~~ 218 (343)
T 1fo8_A 162 FPGLGWLLLAELWAELEPKWPKAFWDDWMRRPEQRKGRACVRPEISRTM-----------------------TFGRKGVS 218 (343)
T ss_dssp CCCSSEEEEHHHHHHHGGGCCSSCHHHHHTSHHHHTTCEEEEESSBSEE-----------------------ECC-----
T ss_pred CCchhhhhcHHHHHHHhhhcchhHHHHHHHHHHHhCCCEEEEeccceeE-----------------------eccccCcc
Confidence 9999999999999999999999999999999999999999999999999 89999999
Q ss_pred cccchhhhhcccccCCccccCCcCcccccchhhhHHHHHHHHhcCCCcchhhhhhcccCCCceEEEEeCCHHHHHHHHhH
Q psy7047 338 NGMYFDKHLKFIHLNDHFVPFTKLNLTYLLRENYDVEYVKLVYSLPTVTYDDLKMNTIKHDGAVRIAYYTKDQFRRNAKF 417 (469)
Q Consensus 338 ~g~~f~~~l~~i~ln~~~v~f~~~dl~~l~~~~Yd~~~~~~v~~a~~~~~~~~~~~~~~~~~~v~i~Y~~~~~~~~~a~~ 417 (469)
+|+||++||++|++|+++|+|+++|++||.+++||+.+.++|++|++++++++..+.....++++|+|+++++|+++|+|
T Consensus 219 ~~~f~~~~l~~~~~n~~~v~~~~~~~~~l~~~~Y~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~i~y~~~~~~~~~a~~ 298 (343)
T 1fo8_A 219 HGQFFDQHLKFIKLNQQFVPFTQLDLSYLQQEAYDRDFLARVYGAPQLQVEKVRTNDRKELGEVRVQYTGRDSFKAFAKA 298 (343)
T ss_dssp --------CTTBCBCCSCCCGGGSCCGGGSHHHHHHHHHHHHHHSCBCCHHHHHTTCCTTCSEEEEECCSHHHHHHHHHH
T ss_pred hhHHHHHHHhhcCCCcccccccccCHHHHhHHHHHHHHHHHHhhCCcccHHHhhhcccCCCCcEEEEECChHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999998766555678999999999999999999
Q ss_pred cCCcccCCCCCCCcceeeEEEeecCCCCCCCceEEeecCCCcccCCCCCCCC
Q psy7047 418 LGLMDDFRSGVPRTVRTSALLQTNGKHPNCGRDILVKMKPKYEAEKPDVTYS 469 (469)
Q Consensus 418 l~l~~d~k~gvpR~~Y~Gvv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (469)
||||+|+|+|||||+|+|||+|++. |+||||+++. .|.+||++||
T Consensus 299 ~~i~~d~~~g~~r~~y~gvv~~~~~-----~~~~~l~p~~--~~~~y~~~~~ 343 (343)
T 1fo8_A 299 LGVMDDLKSGVPRAGYRGIVTFLFR-----GRRVHLAPPQ--TWDGYDPSWT 343 (343)
T ss_dssp TTCCCCEETTEETTCBTTBEEEEET-----TEEEEEECCT--TCCSCCTTCC
T ss_pred hCCcccCcCCccccccceEEEEEEC-----CEEEEEECCC--CcCcCCCCCC
Confidence 9999999999999999999999997 8998877664 5888999997
No 2
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=99.11 E-value=4.6e-10 Score=104.77 Aligned_cols=190 Identities=14% Similarity=0.128 Sum_probs=120.7
Q ss_pred cceEEEEecCChh-HHHHHHHHHhcCCCCCCCcEEEEeCCCChhHHHHHHhhh--hcceEeecCCCCCccCCcccccccc
Q psy7047 99 AIAIVVIACNRVT-VSRCLDLLIKYRPSVEKFPIIVSQDCNHEATTNVIKSYQ--NQVHLIQQPNQQDIAVPPKEKKFKG 175 (469)
Q Consensus 99 ~iPVlV~a~NRPd-l~RtLesLlk~rp~~~~~~LiVsqDG~~~e~~~vv~~y~--~~i~~i~~~d~~~i~~~~~~k~~~~ 175 (469)
.+.|+|.+|||++ +.+||+||+++.. ..++|+|..||+.+++.++++++. .++.++.++... .. ...+|
T Consensus 2 ~vSViIp~yn~~~~l~~~l~Sl~~q~~--~~~eiivvDd~S~d~t~~~~~~~~~~~~i~~i~~~~~~-~~--~~~~n--- 73 (255)
T 1qg8_A 2 KVSVIMTSYNKSDYVAKSISSILSQTF--SDFELFIMDDNSNEETLNVIRPFLNDNRVRFYQSDISG-VK--ERTEK--- 73 (255)
T ss_dssp CEEEEEEESSCTTTHHHHHHHHHTCSC--CCEEEEEEECSCCHHHHHHHGGGGGSTTEEEEECCCCS-HH--HHHSS---
T ss_pred eEEEEEEcCCCHHHHHHHHHHHHhccC--CceEEEEEECCCCchHHHHHHHHhhcCCEEEEeccccc-cc--ccccc---
Confidence 5789999999999 9999999999853 357899999999999999999884 346666553100 00 00011
Q ss_pred chhhhhhHHHHHHHhhhhccccEEEEEccCcccCchHHHHHHhhhhhhcCCCCeeEEecC------CCCCCCcc--cCCC
Q psy7047 176 YFKIARHYGWALNQMFYEFNFSTAIVIEDDLDIAPDFFEYFLGTYPLLISDPTLWCVSAW------NDNGKPTL--IDTS 247 (469)
Q Consensus 176 y~~Ia~Hyk~aLs~vF~~~~~~~vIILEDDLvvSPDFf~Yf~~~L~ly~~D~sI~~ISAw------NdnG~~~~--vd~~ 247 (469)
.+.+...+.|+.. .+.+.+++|++|..+.|++++-+. ..++.++.+.+|.+. +.+|.... ....
T Consensus 74 -~G~~~a~N~gi~~----a~g~~i~~lD~Dd~~~~~~l~~~~---~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 145 (255)
T 1qg8_A 74 -TRYAALINQAIEM----AEGEYITYATDDNIYMPDRLLKMV---RELDTHPEKAVIYSASKTYHLNENRDIVKETVRPA 145 (255)
T ss_dssp -CHHHHHHHHHHHH----CCCSEEEEEETTEEECTTHHHHHH---HHHHHCTTCCEEEEEEEEEEEC---CEEEEEEECC
T ss_pred -cCHHHHHHHHHHH----cCCCEEEEeCCCCccChHHHHHHH---HHHHhCCCceEEEeceEEEEeCCCCcchhhccCch
Confidence 2455544445543 478999999999999999886554 444556666665553 33332111 0000
Q ss_pred CCcceeecCCCCccccccchhhHHHhhc----CCC-------CCCccchhccccccCCCceeeeCccccc
Q psy7047 248 SSDLLYRTDFFPGLGWMLTKDLWDEISV----KWP-------RSYWDDWIRQPEQRKDRACIRPEISRTR 306 (469)
Q Consensus 248 d~~~lyRsdffPglGWmtwrr~W~El~p----kWP-------~~~WD~w~r~~~~r~gr~cI~PeisRt~ 306 (469)
..-......++++.+.+..|++++++.. .|. ...||.|+|. ...|+....|+.--.+
T Consensus 146 ~~~~~~~~~~~~~~~~~~rr~~~~~~g~~f~~~~~~~~~~~~~eD~~~~~r~--~~~g~~~~~~~~~~~~ 213 (255)
T 1qg8_A 146 AQVTWNAPCAIDHCSVMHRYSVLEKVKEKFGSYWDESPAFYRIGDARFFWRV--NHFYPFYPLDEELDLN 213 (255)
T ss_dssp CSCBSCCTTTSCGGGEEEETHHHHHHHHHHSSSSCCCGGGSTTHHHHHHHHH--TTTCCBEEEEEEEEEE
T ss_pred HHHHHhhcCCCccceEEEEHHHHHhhcccccccccCCcccchHHHHHHHHHH--HHhCCEEEecCcEEEE
Confidence 0111133456778899999999997541 222 2356777776 4457766677764443
No 3
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=98.74 E-value=7.2e-08 Score=88.79 Aligned_cols=104 Identities=12% Similarity=0.199 Sum_probs=79.1
Q ss_pred CCcceEEEEecCChh-HHHHHHHHHhcCCCCCCCcEEEEeCCCChhHHHHHHhhhh---cceEeecCCCCCccCCccccc
Q psy7047 97 KDAIAIVVIACNRVT-VSRCLDLLIKYRPSVEKFPIIVSQDCNHEATTNVIKSYQN---QVHLIQQPNQQDIAVPPKEKK 172 (469)
Q Consensus 97 ~~~iPVlV~a~NRPd-l~RtLesLlk~rp~~~~~~LiVsqDG~~~e~~~vv~~y~~---~i~~i~~~d~~~i~~~~~~k~ 172 (469)
.+.+-|+|.+||+++ +.+||+||+++.. ..++|+|..||+.+++.++++.+.. ++.++.++ |
T Consensus 4 ~p~vsViIp~yn~~~~l~~~l~Sl~~q~~--~~~eiIvvDd~S~d~t~~~~~~~~~~~~~i~~i~~~------------n 69 (240)
T 3bcv_A 4 IPKVSVIVPIYNVEKYLDQCVQALLAQTL--SDIEIILIDDESPDNCPKICDDYAAQYPNIKVIHKK------------N 69 (240)
T ss_dssp CCSEEEEEEESSCTTTHHHHHHHHHTCSS--SSEEEEEEECCCSSSHHHHHHHHHHHCSSEEEEECC------------C
T ss_pred CCcEEEEEecCCCHHHHHHHHHHHHhCcC--CCeEEEEEECCCCcCHHHHHHHHHhhCCCEEEEECC------------C
Confidence 346899999999999 9999999999853 2578999999999999999888853 34444321 1
Q ss_pred cccchhhhhhHHHHHHHhhhhccccEEEEEccCcccCchHHHHHHhhhhh
Q psy7047 173 FKGYFKIARHYGWALNQMFYEFNFSTAIVIEDDLDIAPDFFEYFLGTYPL 222 (469)
Q Consensus 173 ~~~y~~Ia~Hyk~aLs~vF~~~~~~~vIILEDDLvvSPDFf~Yf~~~L~l 222 (469)
.+.+...+.|+.. .+.+.+++|++|..+.|++++-+.+.+..
T Consensus 70 ----~G~~~a~N~g~~~----a~g~~i~~lD~Dd~~~~~~l~~l~~~~~~ 111 (240)
T 3bcv_A 70 ----AGLGMACNSGLDV----ATGEYVAFCDSDDYVDSDMYMTMYNVAQK 111 (240)
T ss_dssp ----CCHHHHHHHHHHH----CCSSEEEECCTTCCCCTTHHHHHHHHHHH
T ss_pred ----CChHHHHHHHHHH----cCCCEEEEECCCCcCCHHHHHHHHHHHHh
Confidence 2345544455544 36799999999999999999777666553
No 4
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=98.74 E-value=7.4e-08 Score=99.29 Aligned_cols=190 Identities=15% Similarity=0.176 Sum_probs=120.6
Q ss_pred cCCCCCcceEEEEecCCh-h-HHHHHHHHHhcCCCCCCCcEEEEeCCCCh-hHHHHHHhhhh----cceEeecCCCCCcc
Q psy7047 93 FHYSKDAIAIVVIACNRV-T-VSRCLDLLIKYRPSVEKFPIIVSQDCNHE-ATTNVIKSYQN----QVHLIQQPNQQDIA 165 (469)
Q Consensus 93 ~~~~~~~iPVlV~a~NRP-d-l~RtLesLlk~rp~~~~~~LiVsqDG~~~-e~~~vv~~y~~----~i~~i~~~d~~~i~ 165 (469)
++...+.+-|+|.+||++ + |.+||+||+++.+....++|+|..||+.+ ++.++++.+.. ++.++.++.
T Consensus 24 ~~~~~p~vSVIIp~yN~~~~~l~~~l~Sl~~q~~~~~~~EIIvVDd~S~d~~t~~~l~~~~~~~~~~v~vi~~~~----- 98 (472)
T 1xhb_A 24 YPDNLPTTSVVIVFHNEAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFLKRPLESYVKKLKVPVHVIRMEQ----- 98 (472)
T ss_dssp CCSCCCCEEEEEEESSCCHHHHHHHHHHHHHSSCGGGEEEEEEEECSCCCGGGTHHHHHHHHSSSSCEEEEECSS-----
T ss_pred CCcCCCCeEEEEEeCCCCHHHHHHHHHHHHhcCcHhHceEEEEEECCCCcHHHHHHHHHHHHHCCCcEEEEECCC-----
Confidence 444567899999999999 8 99999999998764433589999999987 48777777642 455555432
Q ss_pred CCccccccccchhhhhhHHHHHHHhhhhccccEEEEEccCcccCchHHHHHHhhhhhhcCCCCeeEEecC---CCCCCCc
Q psy7047 166 VPPKEKKFKGYFKIARHYGWALNQMFYEFNFSTAIVIEDDLDIAPDFFEYFLGTYPLLISDPTLWCVSAW---NDNGKPT 242 (469)
Q Consensus 166 ~~~~~k~~~~y~~Ia~Hyk~aLs~vF~~~~~~~vIILEDDLvvSPDFf~Yf~~~L~ly~~D~sI~~ISAw---NdnG~~~ 242 (469)
| .+.+...+.|+.. ...+.+++|++|+++.|++++-+. ..++.++.+..+... +++....
T Consensus 99 ------n----~G~~~a~N~g~~~----A~gd~i~flD~D~~~~p~~L~~ll---~~~~~~~~~~v~~~~~~~~~~~~~~ 161 (472)
T 1xhb_A 99 ------R----SGLIRARLKGAAV----SRGQVITFLDAHCECTAGWLEPLL---ARIKHDRRTVVCPIIDVISDDTFEY 161 (472)
T ss_dssp ------C----CCHHHHHHHHHHH----CCSSEEEEEESSEEECTTCHHHHH---HHHHHCTTEEEEEEEEEECSSSCCE
T ss_pred ------C----CChHHHHHHHHHh----ccCCeEEEECCCeEeCccHHHHHH---HHHHhCCCEEEEeeeeeEcCCCcee
Confidence 1 1345433444443 468999999999999999986554 445556665443322 1111110
Q ss_pred c---------cC------------------CCCCcceeecCCCCccccccchhhHHHhh---cC---CCCCCccchhccc
Q psy7047 243 L---------ID------------------TSSSDLLYRTDFFPGLGWMLTKDLWDEIS---VK---WPRSYWDDWIRQP 289 (469)
Q Consensus 243 ~---------vd------------------~~d~~~lyRsdffPglGWmtwrr~W~El~---pk---WP~~~WD~w~r~~ 289 (469)
. .+ ..++....++.++.|-..|+.|+.|+++. +. |-...+|.++|.
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~iGgfde~~~~~g~ED~dl~~R~- 240 (472)
T 1xhb_A 162 MAGSDMTYGGFNWKLNFRWYPVPQREMDRRKGDRTLPVRTPTMAGGLFSIDRDYFQEIGTYDAGMDIWGGENLEISFRI- 240 (472)
T ss_dssp ECCCTTEEEEECTTCCEEEEECCHHHHHHTTTCTTSCEECSBCCSSSEEEEHHHHHHTTSCCTTSCTTCCCCSHHHHHH-
T ss_pred ccCCCcccceeeccceeecccCCHHHHhcccCCCCCcccCccccceeEEEEHHHHHHcCCCCCcccccCchhHHHHHHH-
Confidence 0 00 00111234555667777888999999764 22 334567777775
Q ss_pred cccCCCce-eeeCcccccc
Q psy7047 290 EQRKDRAC-IRPEISRTRT 307 (469)
Q Consensus 290 ~~r~gr~c-I~PeisRt~~ 307 (469)
.+.|..+ +.|+ +++.|
T Consensus 241 -~~~G~~i~~~p~-~~v~H 257 (472)
T 1xhb_A 241 -WQCGGTLEIVTC-SHVGH 257 (472)
T ss_dssp -HHTTCEEEEEEE-EEEEE
T ss_pred -HhcCCeEEEccC-cEEEE
Confidence 4566444 4554 56665
No 5
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=98.59 E-value=2.1e-07 Score=99.13 Aligned_cols=180 Identities=14% Similarity=0.128 Sum_probs=119.7
Q ss_pred CCcceEEEEecCChh-HHHHHHHHHhcCCCCCCCcEEEEeCCCChhHHHHHHhhhh---cceEeecCCCCCccCCccccc
Q psy7047 97 KDAIAIVVIACNRVT-VSRCLDLLIKYRPSVEKFPIIVSQDCNHEATTNVIKSYQN---QVHLIQQPNQQDIAVPPKEKK 172 (469)
Q Consensus 97 ~~~iPVlV~a~NRPd-l~RtLesLlk~rp~~~~~~LiVsqDG~~~e~~~vv~~y~~---~i~~i~~~d~~~i~~~~~~k~ 172 (469)
.+.+.|+|.+||+++ +.+||+||+++.. ..+.|+|..||+.+++.++++++.. ++.++... |
T Consensus 374 ~~~vsiii~~yn~~~~l~~~l~s~~~q~~--~~~eiivvdd~S~d~t~~~~~~~~~~~~~i~~~~~~------------n 439 (625)
T 2z86_A 374 VPLVSIYIPAYNCSKYIVRCVESALNQTI--TDLEVCICDDGSTDDTLRILQEHYANHPRVRFISQK------------N 439 (625)
T ss_dssp SCSEEEEEEESSCTTTHHHHHHHHHSSSC--CSEEEEEEEESCSSSHHHHHHHHHTTCTTEEEEEEC------------C
T ss_pred CCeEEEEEeCCCCHHHHHHHHHHHHhCcC--CCeEEEEEECcCChhHHHHHHHHHhhCCcEEEEeCC------------C
Confidence 457899999999999 9999999998853 3468999999999999999888742 34444321 1
Q ss_pred cccchhhhhhHHHHHHHhhhhccccEEEEEccCcccCchHHHHHHhhhhhhcCCCCeeEEecC----CCCCCCcccCCCC
Q psy7047 173 FKGYFKIARHYGWALNQMFYEFNFSTAIVIEDDLDIAPDFFEYFLGTYPLLISDPTLWCVSAW----NDNGKPTLIDTSS 248 (469)
Q Consensus 173 ~~~y~~Ia~Hyk~aLs~vF~~~~~~~vIILEDDLvvSPDFf~Yf~~~L~ly~~D~sI~~ISAw----NdnG~~~~vd~~d 248 (469)
.+++...+.|+.. ...+.+++|++|..+.|++++-+ +..++.++.+.+|.+. +.+|........-
T Consensus 440 ----~G~~~a~n~g~~~----a~g~~i~~ld~D~~~~~~~l~~~---~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 508 (625)
T 2z86_A 440 ----KGIGSASNTAVRL----CRGFYIGQLDSDDFLEPDAVELC---LDEFRKDLSLACVYTTNRNIDREGNLISNGYNW 508 (625)
T ss_dssp ----CCHHHHHHHHHHH----CCSSEEEECCTTCEECTTHHHHH---HHHHHHCTTCSEEEEEEEEECTTSCEEEECCCC
T ss_pred ----CCHHHHHHHHHHh----cCCCEEEEECCCcccChhHHHHH---HHHHHhCCCeeEEEeeeEEECCCCCEeccCccc
Confidence 2345544445543 36799999999999999998654 4445567777766653 2233211000000
Q ss_pred C---cceeecCCCCccccccchhhHHHhhc---CCC-CCCccchhccccccCCCceeeeCcc
Q psy7047 249 S---DLLYRTDFFPGLGWMLTKDLWDEISV---KWP-RSYWDDWIRQPEQRKDRACIRPEIS 303 (469)
Q Consensus 249 ~---~~lyRsdffPglGWmtwrr~W~El~p---kWP-~~~WD~w~r~~~~r~gr~cI~Peis 303 (469)
+ .......+++|-+.|..|+.|+++.. ... ...||.|+|- .+.|+....|++-
T Consensus 509 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~ggfd~~~~~~eD~dl~~r~--~~~g~~~~~~~~~ 568 (625)
T 2z86_A 509 PIYSREKLTSAMICHHFRMFTARAWNLTEGFNESISNAVDYDMYLKL--SEVGPFKHINKIC 568 (625)
T ss_dssp SSCCHHHHTTSCCCCSCEEEEHHHHTTTTCCCSSCSSCHHHHHHHHH--TTTSCEEEEEEEE
T ss_pred ccCCHHHHhhcccCCceEEEEHHHHHHhCCCCCccCChHHHHHHHHH--HHhCCEEEeCCcE
Confidence 1 01123456677788999999987542 222 2368888886 4567777788763
No 6
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=98.49 E-value=4.1e-07 Score=97.21 Aligned_cols=188 Identities=8% Similarity=0.092 Sum_probs=119.1
Q ss_pred CCCCcceEEEEecCCh-h-HHHHHHHHHhcCCCCCCCcEEEEeCCCChhH-HHHHHhhhh---cceEeecCCCCCccCCc
Q psy7047 95 YSKDAIAIVVIACNRV-T-VSRCLDLLIKYRPSVEKFPIIVSQDCNHEAT-TNVIKSYQN---QVHLIQQPNQQDIAVPP 168 (469)
Q Consensus 95 ~~~~~iPVlV~a~NRP-d-l~RtLesLlk~rp~~~~~~LiVsqDG~~~e~-~~vv~~y~~---~i~~i~~~d~~~i~~~~ 168 (469)
...+.+-|+|.+||++ + |.+||+||+++.+....++|||..||+.+++ .++++.+.. ++.++.++.
T Consensus 109 ~~~P~vSVIIp~yNe~~~~L~~~L~Sll~qt~~~~~~EIIVVDDgS~D~tl~~~l~~~~~~~~~v~vi~~~~-------- 180 (570)
T 2d7i_A 109 ETLPNTSIIIPFHNEGWSSLLRTVHSVLNRSPPELVAEIVLVDDFSDREHLKKPLEDYMALFPSVRILRTKK-------- 180 (570)
T ss_dssp SSCCCEEEEEEESSCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCCCGGGTHHHHHHHTTSTTEEEEECSS--------
T ss_pred CCCCCeEEEEEECCCCHHHHHHHHHHHHhcCCccCcEEEEEEECCCCcHHHHHHHHHHHHhCCeEEEEECCC--------
Confidence 3456899999999998 8 9999999999875432347999999999888 788877743 355555422
Q ss_pred cccccccchhhhhhHHHHHHHhhhhccccEEEEEccCcccCchHHHHHHhhhhhhcCCCCeeEEecC---CCCCC-----
Q psy7047 169 KEKKFKGYFKIARHYGWALNQMFYEFNFSTAIVIEDDLDIAPDFFEYFLGTYPLLISDPTLWCVSAW---NDNGK----- 240 (469)
Q Consensus 169 ~~k~~~~y~~Ia~Hyk~aLs~vF~~~~~~~vIILEDDLvvSPDFf~Yf~~~L~ly~~D~sI~~ISAw---NdnG~----- 240 (469)
+ .+.++-.+.|+.. ...+.+++|++|+++.|++++-+.+. ++.++.+...+.. +....
T Consensus 181 ---n----~G~~~A~N~G~~~----A~gd~i~fLD~D~~~~p~~L~~ll~~---l~~~~~~vv~~~i~~~~~~~~~~~~~ 246 (570)
T 2d7i_A 181 ---R----EGLIRTRMLGASV----ATGDVITFLDSHCEANVNWLPPLLDR---IARNRKTIVCPMIDVIDHDDFRYETQ 246 (570)
T ss_dssp ---C----CCHHHHHHHHHHH----CCSSEEEECCSSEEECTTCSHHHHHH---HHHCTTEEEEEEEEEECTTTCCEECC
T ss_pred ---C----CCHHHHHHHHHHh----cCCCEEEEEcCCccccccHHHHHHHH---HHhCCCEEEeeeeeccCCCchhhccc
Confidence 1 2345544445543 46899999999999999998655444 4455555322111 11100
Q ss_pred -----Cccc---------------CCCCCcceeecCCCCccccccchhhHHHhhc---CCC---CCCccchhccccccCC
Q psy7047 241 -----PTLI---------------DTSSSDLLYRTDFFPGLGWMLTKDLWDEISV---KWP---RSYWDDWIRQPEQRKD 294 (469)
Q Consensus 241 -----~~~v---------------d~~d~~~lyRsdffPglGWmtwrr~W~El~p---kWP---~~~WD~w~r~~~~r~g 294 (469)
.... +..++...+++..+.|-..|+.|+.|+++.. ... ...+|.++|. .+.|
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~iGgfDe~~~~~g~ED~dl~~Rl--~~~G 324 (570)
T 2d7i_A 247 AGDAMRGAFDWEMYYKRIPIPPELQKADPSDPFESPVMAGGLFAVDRKWFWELGGYDPGLEIWGGEQYEISFKV--WMCG 324 (570)
T ss_dssp TTSSCEEEECTTCCEEEECCCTTTCCSSTTSCEECSSCCSSSEEEEHHHHHHTTSSCTTCCSSSSHHHHHHHHH--HHTT
T ss_pred cCCcccccccccccccccccchhhhccCCCcceecccccceEEEEEHHHHHhcCCCCCcccccCcchHHHHHHH--HhCC
Confidence 0000 0112233456667788889999999998643 221 2345666665 4566
Q ss_pred Ccee-eeCcccccc
Q psy7047 295 RACI-RPEISRTRT 307 (469)
Q Consensus 295 r~cI-~PeisRt~~ 307 (469)
...+ .|+ +++.|
T Consensus 325 ~~i~~~p~-~~v~H 337 (570)
T 2d7i_A 325 GRMEDIPC-SRVGH 337 (570)
T ss_dssp CEEEEEEE-EEEEE
T ss_pred CeEEEccC-eEEEE
Confidence 5444 555 45666
No 7
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=98.47 E-value=8.8e-07 Score=94.29 Aligned_cols=116 Identities=16% Similarity=0.365 Sum_probs=85.7
Q ss_pred CcceEEEEecCChh-HHHHHHHHHhcCCCCCCCcEEEEeCCCChhHHHHHHhhhh--cceEeecCCCCCccCCccccccc
Q psy7047 98 DAIAIVVIACNRVT-VSRCLDLLIKYRPSVEKFPIIVSQDCNHEATTNVIKSYQN--QVHLIQQPNQQDIAVPPKEKKFK 174 (469)
Q Consensus 98 ~~iPVlV~a~NRPd-l~RtLesLlk~rp~~~~~~LiVsqDG~~~e~~~vv~~y~~--~i~~i~~~d~~~i~~~~~~k~~~ 174 (469)
+.+-|+|.+||+++ +.+||++|+++... ..++|+|..||+.+++.++++.+.. .+.++.+++. +
T Consensus 93 p~vsviIp~~n~~~~l~~~l~sl~~q~~~-~~~eiivvDd~s~d~t~~~~~~~~~~~~i~~i~~~~~----------~-- 159 (625)
T 2z86_A 93 DGLSIVIPTYNRAKILAITLACLCNQKTI-YDYEVIVADDGSKENIEEIVREFESLLNIKYVRQKDY----------G-- 159 (625)
T ss_dssp CCEEEEEEESSCHHHHHHHHHHHHTCCCS-SCEEEEEEEESCSSCHHHHHHTTTTTSCEEEEEECCC----------S--
T ss_pred CcEEEEEecCCcHHHHHHHHHHHHhhccC-CCeEEEEEeCCCchhHHHHHHHhhhcCCeEEEEeCCC----------C--
Confidence 46789999999999 99999999998532 2578999999999999999999853 3444444221 0
Q ss_pred cchhhhhhHHHHHHHhhhhccccEEEEEccCcccCchHHHHHHhhhhhhcCCCCeeEEecC
Q psy7047 175 GYFKIARHYGWALNQMFYEFNFSTAIVIEDDLDIAPDFFEYFLGTYPLLISDPTLWCVSAW 235 (469)
Q Consensus 175 ~y~~Ia~Hyk~aLs~vF~~~~~~~vIILEDDLvvSPDFf~Yf~~~L~ly~~D~sI~~ISAw 235 (469)
.+.+...+.|+.. ...+.++++++|+.+.|+++.-+. ..++.++.+..+++.
T Consensus 160 --~g~~~a~N~g~~~----a~g~~v~~lD~D~~~~~~~l~~~~---~~~~~~~~~~~~g~~ 211 (625)
T 2z86_A 160 --YQLCAVRNLGLRA----AKYNYVAILDCDMAPNPLWVQSYM---ELLAVDDNVALIGPR 211 (625)
T ss_dssp --CCHHHHHHHHHHH----CCSSEEEEECTTEEECTTHHHHHH---HHHHHCTTEEEECCE
T ss_pred --cchhHHHHHHHHh----CCcCEEEEECCCCCCCHHHHHHHH---HHHhcCCceEEEEee
Confidence 1345434445543 478999999999999999986554 455567777777653
No 8
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*
Probab=98.40 E-value=4.4e-07 Score=99.25 Aligned_cols=191 Identities=14% Similarity=0.134 Sum_probs=120.7
Q ss_pred CCCCcceEEEEecCChh-HHHHHHHHHhcCCC-CCCCcEEEEeCCCCh-----hHHHHHHhhhhcceEeecCCCCCccCC
Q psy7047 95 YSKDAIAIVVIACNRVT-VSRCLDLLIKYRPS-VEKFPIIVSQDCNHE-----ATTNVIKSYQNQVHLIQQPNQQDIAVP 167 (469)
Q Consensus 95 ~~~~~iPVlV~a~NRPd-l~RtLesLlk~rp~-~~~~~LiVsqDG~~~-----e~~~vv~~y~~~i~~i~~~d~~~i~~~ 167 (469)
+..+.+.|+|.+|||++ +.+||+||+++... ...+.|||..||+.+ ++.+.++.+..++.+|.+++
T Consensus 177 ~~~pkVSVVIptYN~~~~L~~~L~SL~~qt~~~~~~~EIIVVDNgStD~s~~~~~~e~~~~~~~~I~vI~~~N------- 249 (657)
T 4fix_A 177 PGTANIAVGIPTFNRPADCVNALRELTADPLVDQVIGAVIVPDQGERKVRDHPDFPAAAARLGSRLSIHDQPN------- 249 (657)
T ss_dssp CSCCCEEEECCBSSCHHHHHHHHHHHTTSHHHHTTEEEEEEEECSSSCGGGSTTHHHHHHHHGGGEEEEECCC-------
T ss_pred CCCCeEEEEEEecCCHHHHHHHHHHHHcCccccCCCCEEEEEECcCCCccchHHHHHHHHhcCCCEEEEECCC-------
Confidence 44578999999999999 99999999986421 122379999999864 34556666666777776531
Q ss_pred ccccccccchhhhhhHHHHHHHhhhhccccEEEEEccCcccCchHHHHHHhhhhhhcCCCCeeEEecC----CCCCCC--
Q psy7047 168 PKEKKFKGYFKIARHYGWALNQMFYEFNFSTAIVIEDDLDIAPDFFEYFLGTYPLLISDPTLWCVSAW----NDNGKP-- 241 (469)
Q Consensus 168 ~~~k~~~~y~~Ia~Hyk~aLs~vF~~~~~~~vIILEDDLvvSPDFf~Yf~~~L~ly~~D~sI~~ISAw----NdnG~~-- 241 (469)
.+.+.-++.|+.......+++.+++|+||.++.|++++-+.+ .++.++.+.+|++- .+....
T Consensus 250 ---------~G~a~a~N~Gl~~A~g~~~~dyIlfLD~D~~~~pd~L~~ll~---~l~~~~~~~~vg~~il~~~~~~~~~~ 317 (657)
T 4fix_A 250 ---------LGGSGGYSRVMYEALKNTDCQQILFMDDDIRLEPDSILRVLA---MHRFAKAPMLVGGQMLNLQEPSHLHI 317 (657)
T ss_dssp ---------CHHHHHHHHHHHHHHHHCCCSEEEEECSSEEECTHHHHHHHH---HHHHBSSCCEEEEEEEETTSTTEECC
T ss_pred ---------CCHHHHHHHHHHHHHhcCCCCEEEEECCCCccChhHHHHHHH---HHHhCCCcEEEEeEEecCCCCceeee
Confidence 355666677887776633689999999999999999865544 44556666666642 211000
Q ss_pred --cccC----------------------CCC-------CcceeecCCCCccccccchhhHHHhhcCCCC----CCccchh
Q psy7047 242 --TLID----------------------TSS-------SDLLYRTDFFPGLGWMLTKDLWDEISVKWPR----SYWDDWI 286 (469)
Q Consensus 242 --~~vd----------------------~~d-------~~~lyRsdffPglGWmtwrr~W~El~pkWP~----~~WD~w~ 286 (469)
..++ ..+ .......++..|++-|..|++++++..--|. ..+|-++
T Consensus 318 ~g~~~~~~~~~~~~~~~~~~~~~f~~~~l~~~~~~~~~~~~~~~v~~~~g~~~lirr~v~~~vGgfd~~F~~~ED~Dl~l 397 (657)
T 4fix_A 318 MGEVVDRSIFMWTAAPHAEYDHDFAEYPLNDNNSRSKLLHRRIDVDYNGWWTCMIPRQVAEELGQPLPLFIKWDDADYGL 397 (657)
T ss_dssp SCEEEETTTTEEEECTTCCSCEETTTSCSSCSSHHHHGGGBCCCCSBCCTTEEEEEHHHHHHHCSCCSCSSSSHHHHHHH
T ss_pred cccEeccccccccccccccccccccccccccccccccccccceeccccchhHhHhhHHHHHHhCCChhHhccCcHHHHHH
Confidence 0000 000 0011234567788899999999986532232 1334445
Q ss_pred ccccccCCCce-eeeCcccccc
Q psy7047 287 RQPEQRKDRAC-IRPEISRTRT 307 (469)
Q Consensus 287 r~~~~r~gr~c-I~PeisRt~~ 307 (469)
|. .+.|-.+ ..|++ .++|
T Consensus 398 R~--~~~G~ki~~~p~a-~V~H 416 (657)
T 4fix_A 398 RA--AEHGYPTVTLPGA-AIWH 416 (657)
T ss_dssp HH--HHTTCCEEEEEEE-EEEE
T ss_pred HH--HHcCCeEEEECCE-EEEE
Confidence 54 4566544 45554 4565
No 9
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=98.29 E-value=3.3e-06 Score=88.04 Aligned_cols=187 Identities=16% Similarity=0.186 Sum_probs=112.7
Q ss_pred CCCCCcceEEEEecCCh-h-HHHHHHHHHhcCCCCCCCcEEEEeCCCChhHHHH-HHhhhhcceEeecCCCCCccCCccc
Q psy7047 94 HYSKDAIAIVVIACNRV-T-VSRCLDLLIKYRPSVEKFPIIVSQDCNHEATTNV-IKSYQNQVHLIQQPNQQDIAVPPKE 170 (469)
Q Consensus 94 ~~~~~~iPVlV~a~NRP-d-l~RtLesLlk~rp~~~~~~LiVsqDG~~~e~~~v-v~~y~~~i~~i~~~d~~~i~~~~~~ 170 (469)
....+.+-|||.+||++ . |.++|+||+++.+....++|+|..||+.+++... ++.+ .++.++.++.
T Consensus 62 ~~~~p~vSVIIp~yN~~~~~L~~~l~Sl~~q~~~~~~~EIIvVDDgS~D~t~~~~~~~~-~~v~vi~~~~---------- 130 (501)
T 2ffu_A 62 RVDLPATSVVITFHNEARSALLRTVVSVLKKSPPHLIKEIILVDDYSNDPEDGALLGKI-EKVRVLRNDR---------- 130 (501)
T ss_dssp CSSCCCEEEEEEESSCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCSCTHHHHGGGGB-TTEEEEECSS----------
T ss_pred CcCCCCEEEEEEeCcCcHHHHHHHHHHHHhhCchhhceeEEEEECCCCchHHHHHHhcC-CCEEEEECCC----------
Confidence 34456899999999998 4 9999999999876432357999999998876433 2222 2455555422
Q ss_pred cccccchhhhhhHHHHHHHhhhhccccEEEEEccCcccCchHHHHHHhhhhhhcCCCCeeEEecC----CCCCCCcc---
Q psy7047 171 KKFKGYFKIARHYGWALNQMFYEFNFSTAIVIEDDLDIAPDFFEYFLGTYPLLISDPTLWCVSAW----NDNGKPTL--- 243 (469)
Q Consensus 171 k~~~~y~~Ia~Hyk~aLs~vF~~~~~~~vIILEDDLvvSPDFf~Yf~~~L~ly~~D~sI~~ISAw----NdnG~~~~--- 243 (469)
| .+.+.-.+.|+.. ...+.+++|++|+++.|++++=+.+. ++.++.. .|++. +..+....
T Consensus 131 -n----~G~~~A~N~G~~~----A~gd~i~flD~D~~~~p~~L~~ll~~---~~~~~~~-vv~~~~~~~~~~~~~~~~~~ 197 (501)
T 2ffu_A 131 -R----EGLMRSRVRGADA----AQAKVLTFLDSHCECNEHWLEPLLER---VAEDRTR-VVSPIIDVINMDNFQYVGAS 197 (501)
T ss_dssp -C----CHHHHHHHHHHHH----CCSSEEEECCSSEEECTTCHHHHHHH---HHHCTTE-EEEEEEEEECTTTCCEECBC
T ss_pred -C----cCHHHHHHHHHHh----cCCCEEEEECCCcccCccHHHHHHHH---HHhCCCe-EEEeeeccCcCCCceeecCC
Confidence 1 2455533444443 46899999999999999998655544 4445443 22221 11111000
Q ss_pred ------cC------------------CCCCcceeecCCCCccccccchhhHHHhhc---C---CCCCCccchhccccccC
Q psy7047 244 ------ID------------------TSSSDLLYRTDFFPGLGWMLTKDLWDEISV---K---WPRSYWDDWIRQPEQRK 293 (469)
Q Consensus 244 ------vd------------------~~d~~~lyRsdffPglGWmtwrr~W~El~p---k---WP~~~WD~w~r~~~~r~ 293 (469)
.. ..++....++..+.|-..++.|+.++++.. . |....+|.++|. .+.
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~iGgfde~~~~~g~ED~dl~~Rl--~~~ 275 (501)
T 2ffu_A 198 ADLKGGFDWNLVFKWDYMTPEQRRSRQGNPVAPIKTPMIAGGLFVMDKFYFEELGKYDMMMDVWGGENLEISFRV--WQC 275 (501)
T ss_dssp SSEEEEECTTCCEEEEECCHHHHHHTSSCTTSCEECSSCCSSSEEEEHHHHHHTTCCCTTCCSSSSHHHHHHHHH--HHT
T ss_pred cccceEeeecCCCccccCCHHHHhhccCCCCCcccCccccceEEEEEHHHHHHhCCCCccccccCcchHHHHHHH--Hhc
Confidence 00 002223345566777889999999998652 1 223345666665 445
Q ss_pred C-CceeeeCcccccc
Q psy7047 294 D-RACIRPEISRTRT 307 (469)
Q Consensus 294 g-r~cI~PeisRt~~ 307 (469)
| +....|+ +++.|
T Consensus 276 G~~i~~~p~-~~v~H 289 (501)
T 2ffu_A 276 GGSLEIIPC-SRVGH 289 (501)
T ss_dssp TCEEEEEEE-EEEEE
T ss_pred CCeEEEccC-cEEEE
Confidence 5 4445554 45554
No 10
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=98.22 E-value=1.5e-07 Score=102.93 Aligned_cols=179 Identities=11% Similarity=0.175 Sum_probs=0.0
Q ss_pred CcceEEEEecCChh-HHHHHHHHHhcCCCCCCCcEEEEeCCCChhHHHHHHhhhh----cceEeecCCCCCccCCccccc
Q psy7047 98 DAIAIVVIACNRVT-VSRCLDLLIKYRPSVEKFPIIVSQDCNHEATTNVIKSYQN----QVHLIQQPNQQDIAVPPKEKK 172 (469)
Q Consensus 98 ~~iPVlV~a~NRPd-l~RtLesLlk~rp~~~~~~LiVsqDG~~~e~~~vv~~y~~----~i~~i~~~d~~~i~~~~~~k~ 172 (469)
+.+-|+|.+||+++ +.+||+||+++.. ..++|+|..||+.+++.++++++.. ++.++.++. |
T Consensus 2 p~vSVIIp~yN~~~~L~~~L~Sll~Qt~--~~~EIIVVDDgStD~t~~il~~~~~~~~~~i~~i~~~~-----------n 68 (729)
T 3l7i_A 2 NKLTIIVTYYNAEEYITGCLESIKQQRT--QDFNLIIVNDGSTDQSKKLMDEAIKDYDKNIRFIDLDE-----------N 68 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ceEEEEEEcCCCHHHHHHHHHHHHhCCC--CCeEEEEEECCCCCcHHHHHHHHHHhCCCCEEEEECCC-----------C
Confidence 35789999999999 9999999999853 3578999999999989888888742 344444322 1
Q ss_pred cccchhhhhhHHHHHHHhhhhccccEEEEEccCcccCchHHHHHHhhhhhhcCCCCeeEEecCCCCCCCcccCCCC----
Q psy7047 173 FKGYFKIARHYGWALNQMFYEFNFSTAIVIEDDLDIAPDFFEYFLGTYPLLISDPTLWCVSAWNDNGKPTLIDTSS---- 248 (469)
Q Consensus 173 ~~~y~~Ia~Hyk~aLs~vF~~~~~~~vIILEDDLvvSPDFf~Yf~~~L~ly~~D~sI~~ISAwNdnG~~~~vd~~d---- 248 (469)
.+++...+.|+.. .+.+.+++|++|..+.|++++-+.+.+. +.|--+..+..+++.+.... ....
T Consensus 69 ----~G~~~arN~gi~~----A~gdyI~flD~Dd~~~p~~l~~l~~~l~--~~d~v~~~~~~~~~~~~~~~-~~~~~~~~ 137 (729)
T 3l7i_A 69 ----SGHAHARNIALEE----VETPYFMFLDADDELASYAITFYLEKFN--NTDGLIAPIHSFTTQRPQFV-DLDRVRVE 137 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ----CCHHHHHHHHHHh----ccCCEEEEECCCCCCChhHHHHHHHHhc--CCCEEEEeeEEeecCCCccc-cccceeee
Confidence 1334333344433 3678999999999999999977776666 22222222223332211110 0000
Q ss_pred ---Ccce--eecCCCCccccccchhhHHHhhcCCCC-----CCccchhccccccCC-Cceee-eCc
Q psy7047 249 ---SDLL--YRTDFFPGLGWMLTKDLWDEISVKWPR-----SYWDDWIRQPEQRKD-RACIR-PEI 302 (469)
Q Consensus 249 ---~~~l--yRsdffPglGWmtwrr~W~El~pkWP~-----~~WD~w~r~~~~r~g-r~cI~-Pei 302 (469)
.... ......++++-+..|+++++..-.++. ..||.|+|- ...| +.+.. |+.
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~gl~fde~~~~~ED~d~~~rl--~~~g~~i~~~~~~~ 201 (729)
T 3l7i_A 138 YFNAKENINSFLRKQSACNIIFRTAIVRAHHIRFNENLNTYVDWSFVLEY--MKYVNKFVRIFNFP 201 (729)
T ss_dssp ------------------------------------------------------------------
T ss_pred eecchhhHHHHhhccchhheeeeHHHHHHcCCCcCCCCCcccCHHHHHHH--HHhcCCEEEecCcE
Confidence 0000 011134667889999999865533433 368888887 3444 44444 443
No 11
>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A
Probab=98.12 E-value=1.3e-05 Score=79.32 Aligned_cols=121 Identities=13% Similarity=0.141 Sum_probs=83.5
Q ss_pred CCcceEEEEecCChh-HHHHHHHHHhcCCCCCCCcEEEEeCCCChhHHHHHHhhhhcceEeecCCCCCccCCcccccccc
Q psy7047 97 KDAIAIVVIACNRVT-VSRCLDLLIKYRPSVEKFPIIVSQDCNHEATTNVIKSYQNQVHLIQQPNQQDIAVPPKEKKFKG 175 (469)
Q Consensus 97 ~~~iPVlV~a~NRPd-l~RtLesLlk~rp~~~~~~LiVsqDG~~~e~~~vv~~y~~~i~~i~~~d~~~i~~~~~~k~~~~ 175 (469)
.+.+-|+|.+||+.+ +.+||+||+++... ..++|+|..||+.+++.++++++..++ +..... + ....+|
T Consensus 47 ~~~vSViIp~yN~~~~l~~~l~sl~~q~~~-~~~eiivVDdgS~D~t~~~~~~~~~~~--~~~~~~--~--~~~~~n--- 116 (329)
T 3ckj_A 47 GRTISVVLPALDEEDTIGSVIDSISPLVDG-LVDELIVLDSGSTDDTEIRAVAAGARV--VSREQA--L--PEVPIR--- 116 (329)
T ss_dssp TCCEEEEEEESSCTTTHHHHHHHHGGGBTT-TBSEEEEEECSCCSSHHHHHHHTTCEE--EEHHHH--C--TTSCCC---
T ss_pred CCcEEEEEeeCCCHHHHHHHHHHHHHhhCC-CCcEEEEEeCCCCchHHHHHHHhhhhh--ccceee--e--ccCCCC---
Confidence 457899999999999 99999999998522 236899999999999999999986542 111000 0 001111
Q ss_pred chhhhhhHHHHHHHhhhhccccEEEEEccCcc-cCchHHHHHHhhhhhhcCCCCeeEEecC
Q psy7047 176 YFKIARHYGWALNQMFYEFNFSTAIVIEDDLD-IAPDFFEYFLGTYPLLISDPTLWCVSAW 235 (469)
Q Consensus 176 y~~Ia~Hyk~aLs~vF~~~~~~~vIILEDDLv-vSPDFf~Yf~~~L~ly~~D~sI~~ISAw 235 (469)
.+.+...+.|+ ...+.+.++++++|.. +.|+++.-+ +..+..++.+.+|.|.
T Consensus 117 -~G~~~a~n~g~----~~a~gd~i~~lD~D~~~~~p~~l~~l---~~~l~~~~~~~~v~g~ 169 (329)
T 3ckj_A 117 -PGKGEALWRSL----AASRGDIVVFVDSDLINPHPMFVPWL---VGPLLTGDGVHLVKSF 169 (329)
T ss_dssp -CSHHHHHHHHH----HHCCCSEEEECCTTEESCCTTHHHHH---HHHHHSCSSCCEEEEE
T ss_pred -CCHHHHHHHHH----HhCCCCEEEEECCCCCCcChHHHHHH---HHHHHhCCCccEEEEE
Confidence 23454334444 4346899999999999 899998554 4454567777766663
No 12
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=97.98 E-value=3.2e-05 Score=86.11 Aligned_cols=178 Identities=14% Similarity=0.156 Sum_probs=109.4
Q ss_pred CCcceEEEEecCChh--HHHHHHHHHhcCCCCCCCcEEEEeCCCChhHH---------------HHHHhhhh--cceEee
Q psy7047 97 KDAIAIVVIACNRVT--VSRCLDLLIKYRPSVEKFPIIVSQDCNHEATT---------------NVIKSYQN--QVHLIQ 157 (469)
Q Consensus 97 ~~~iPVlV~a~NRPd--l~RtLesLlk~rp~~~~~~LiVsqDG~~~e~~---------------~vv~~y~~--~i~~i~ 157 (469)
.+.+-|+|.+||.+. +++||+||+++....++++|+|..||+.+++. +.++.+.. .+.++.
T Consensus 139 ~P~VSViIPtyNe~~~lL~~~L~Sl~~q~yp~~~~eIiVVDDgStD~T~~~~d~~i~~~~~~~~~~l~~~~~~~~v~~i~ 218 (802)
T 4hg6_A 139 LPTVDILVPSYNEPADMLSVTLAAAKNMIYPARLRTVVLCDDGGTDQRCMSPDPELAQKAQERRRELQQLCRELGVVYST 218 (802)
T ss_dssp CCCEEEEEECTTCCHHHHHHHHHHHHTSSCCTTCCEEEEESTTCHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred CCcEEEEEEECCCCHHHHHHHHHHHHhccCCCCcEEEEEEECCCCccccccCCHHHHHHHHhhhHHHHHHHHhcCcEEEE
Confidence 357889999999996 59999999998655556789999999877652 22333321 233333
Q ss_pred cCCCCCccCCccccccccchhhhhhHHHHHHHhhhhccccEEEEEccCcccCchHHHHHHhhhhhhcCCCCeeEEecCCC
Q psy7047 158 QPNQQDIAVPPKEKKFKGYFKIARHYGWALNQMFYEFNFSTAIVIEDDLDIAPDFFEYFLGTYPLLISDPTLWCVSAWND 237 (469)
Q Consensus 158 ~~d~~~i~~~~~~k~~~~y~~Ia~Hyk~aLs~vF~~~~~~~vIILEDDLvvSPDFf~Yf~~~L~ly~~D~sI~~ISAwNd 237 (469)
.++. . .+.+. |++..+...+.+.++++++|..+.||+++-+ +..+++|+.+.+|++--.
T Consensus 219 ~~~~--------~------~GKa~----alN~gl~~a~gd~Il~lDaD~~~~pd~L~~l---v~~~~~dp~v~~V~~~~~ 277 (802)
T 4hg6_A 219 RERN--------E------HAKAG----NMSAALERLKGELVVVFDADHVPSRDFLART---VGYFVEDPDLFLVQTPHF 277 (802)
T ss_dssp CSSC--------C------SHHHH----HHHHHHHHCCCSEEEECCTTEEECTTHHHHH---HHHHHHSSSCCEEECCCC
T ss_pred ecCC--------C------CcchH----HHHHHHHhcCCCEEEEECCCCCcChHHHHHH---HHHHhcCCCeEEEeccEE
Confidence 3211 0 12233 4555555457999999999999999998554 455566999999987432
Q ss_pred --CCCC------cccCCCCC-cc----------eeecCCCCccccccchhhHHHhhcCCCCC----CccchhccccccCC
Q psy7047 238 --NGKP------TLIDTSSS-DL----------LYRTDFFPGLGWMLTKDLWDEISVKWPRS----YWDDWIRQPEQRKD 294 (469)
Q Consensus 238 --nG~~------~~vd~~d~-~~----------lyRsdffPglGWmtwrr~W~El~pkWP~~----~WD~w~r~~~~r~g 294 (469)
++.. ........ .. .+...+++|-+-|..|++++++.. |+.. ++|.++| ..++|
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~al~~vGg-f~~~~~~ED~~l~~r--l~~~G 354 (802)
T 4hg6_A 278 FINPDPIQRNLALGDRCPPENEMFYGKIHRGLDRWGGAFFCGSAAVLRRRALDEAGG-FAGETITEDAETALE--IHSRG 354 (802)
T ss_dssp BSSCCHHHHHHTCCTTSCCTTHHHHHTHHHHHHHTTCCCCCSSSEEEEHHHHHHHTT-CCCSSSSHHHHHHHH--HHTTT
T ss_pred EeCCchHhhhhhHHhhhhHHHHHHHHHHHhhHhhcCCceecccchhhhHHHHHHcCC-cCCCCcchHHHHHHH--HHHcC
Confidence 1110 00000001 11 122346778888999999998742 3322 3444444 45566
Q ss_pred Ccee
Q psy7047 295 RACI 298 (469)
Q Consensus 295 r~cI 298 (469)
..+.
T Consensus 355 ~ri~ 358 (802)
T 4hg6_A 355 WKSL 358 (802)
T ss_dssp CCEE
T ss_pred CeEE
Confidence 5443
No 13
>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A*
Probab=97.86 E-value=3.7e-05 Score=78.93 Aligned_cols=121 Identities=16% Similarity=0.111 Sum_probs=84.4
Q ss_pred CCcceEEEEecCChh-HHHHHHHHHhc--CCCCCCCcEEEEeCCCChhHHHHHHhhhhcceEeecCCCCCccCCcccccc
Q psy7047 97 KDAIAIVVIACNRVT-VSRCLDLLIKY--RPSVEKFPIIVSQDCNHEATTNVIKSYQNQVHLIQQPNQQDIAVPPKEKKF 173 (469)
Q Consensus 97 ~~~iPVlV~a~NRPd-l~RtLesLlk~--rp~~~~~~LiVsqDG~~~e~~~vv~~y~~~i~~i~~~d~~~i~~~~~~k~~ 173 (469)
.+.+-|+|.+||..+ +.+||++|++. +. ...++|+|..||+.+.+.++++++..++ +... +.+....+|
T Consensus 93 ~p~vSVVIP~yNe~~~l~~~l~sl~~~l~~~-~~~~EIIVVDDgStD~T~~i~~~~~~~v--~~~~----~~~i~~~~n- 164 (387)
T 3f1y_A 93 GLTVSAVLPSRNVADTVGGIIDEIHALNERA-PLIDQILVVDADSEDGTAGVAASHGAEV--YSEN----ELMSGYGDA- 164 (387)
T ss_dssp TCCEEEEEEESSCTTTHHHHHHHHHHHHHHS-CCCSEEEEEECSCSSSHHHHHHHTTCEE--EEGG----GTTGGGCSC-
T ss_pred CCeEEEEEEcCCCHHHHHHHHHHHHHHHhcC-CCCeEEEEEcCcCCccHHHHHHHhCchh--cccc----eeEecCCcc-
Confidence 356899999999999 99999999872 11 1236899999999999999999987542 2221 111111111
Q ss_pred ccchhhhhhHHHHHHHhhhhccccEEEEEccCcc-cCchHHHHHHhhhhhhcCCCCeeEEecC
Q psy7047 174 KGYFKIARHYGWALNQMFYEFNFSTAIVIEDDLD-IAPDFFEYFLGTYPLLISDPTLWCVSAW 235 (469)
Q Consensus 174 ~~y~~Ia~Hyk~aLs~vF~~~~~~~vIILEDDLv-vSPDFf~Yf~~~L~ly~~D~sI~~ISAw 235 (469)
.+.+. |++.-+.....+.+++++.|+. +.|+++ ..++..+..++.+.+|.|+
T Consensus 165 ---~G~g~----A~n~G~~~A~gd~i~~lDaD~~~~~p~~L---~~l~~~l~~~p~~d~v~G~ 217 (387)
T 3f1y_A 165 ---HGKGD----AMWRALSVTRGDLVLYIDADTRDFRPQLA---YGVLGPVLEVPGVRFVKAA 217 (387)
T ss_dssp ---CSHHH----HHHHHTTTCCSSEEEECCTTCSSCCTHHH---HTTHHHHHHSTTCCEEEEE
T ss_pred ---CCHHH----HHHHHHHhcCCCEEEEEcCCCCcCCHHHH---HHHHHHHHHCCCceEEEEe
Confidence 23444 5555555457899999999999 899998 4555556567777777764
No 14
>2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ...
Probab=96.65 E-value=0.007 Score=59.59 Aligned_cols=148 Identities=20% Similarity=0.194 Sum_probs=87.7
Q ss_pred CCcceEEEEecCChh-HHHHHHHHH---hcCCCCCCCcEEEEeCCCChhHHHHHHhhhhcceEeecCCCCCccCCccccc
Q psy7047 97 KDAIAIVVIACNRVT-VSRCLDLLI---KYRPSVEKFPIIVSQDCNHEATTNVIKSYQNQVHLIQQPNQQDIAVPPKEKK 172 (469)
Q Consensus 97 ~~~iPVlV~a~NRPd-l~RtLesLl---k~rp~~~~~~LiVsqDG~~~e~~~vv~~y~~~i~~i~~~d~~~i~~~~~~k~ 172 (469)
.+.+.|+|.+|||++ |.++|++|+ ++. ...++|+|..|+.+.. |
T Consensus 64 ~~~VSIIIP~yN~~~~L~~~L~sl~~~l~q~--~~~~EIiVVdds~d~~-------f----------------------- 111 (287)
T 2fy7_A 64 PHKVAIIIPFRNRQEHLKYWLYYLHPVLQRQ--QLDYGIYVINQAGDTI-------F----------------------- 111 (287)
T ss_dssp SCEEEEEEEESSCHHHHHHHHHHHHHHHHHT--TCEEEEEEEEECSSSC-------C-----------------------
T ss_pred CCcEEEEEeeCCCHHHHHHHHHHHHHHHHHh--cCCceEEEEEeCCCCc-------c-----------------------
Confidence 467999999999999 999999999 343 2346899888843210 0
Q ss_pred cccchhhhhhHHHHHHHhhhhccccEEEEEccCcccCchHHHHHHhhhhhhcCCCCeeEEecCCC-CCCCcccCCCCCcc
Q psy7047 173 FKGYFKIARHYGWALNQMFYEFNFSTAIVIEDDLDIAPDFFEYFLGTYPLLISDPTLWCVSAWND-NGKPTLIDTSSSDL 251 (469)
Q Consensus 173 ~~~y~~Ia~Hyk~aLs~vF~~~~~~~vIILEDDLvvSPDFf~Yf~~~L~ly~~D~sI~~ISAwNd-nG~~~~vd~~d~~~ 251 (469)
+.+.-.+.|+.......+.+.++++++|+++.||+..|. ....++.+ +...+ .++ ..+
T Consensus 112 -----~~a~a~N~G~~~al~~A~gd~i~flD~D~i~~~d~~~~~------~~~~p~~~--~~~~~~~~~------~~~-- 170 (287)
T 2fy7_A 112 -----NRAKLLNVGFQEALKDYDYTCFVFSDVDLIPMNDHNAYR------CFSQPRHI--SVAMDKFGF------SLP-- 170 (287)
T ss_dssp -----CHHHHHHHHHHHHHHHSCCCEEEEECTTEEESBTTSCCS------CCSSCEEC--CCEEGGGTT------SCS--
T ss_pred -----chhhhhhhHHHHHHHhCCCCEEEEECCCcccCCCcceEe------cCCCCceE--EEeeccccc------CCC--
Confidence 012112234433234347899999999999999973221 11233321 11111 111 011
Q ss_pred eeecCCCCccccccchhhHHHhhc------CCCCCCccchhccccccCCCceeeeCc
Q psy7047 252 LYRTDFFPGLGWMLTKDLWDEISV------KWPRSYWDDWIRQPEQRKDRACIRPEI 302 (469)
Q Consensus 252 lyRsdffPglGWmtwrr~W~El~p------kWP~~~WD~w~r~~~~r~gr~cI~Pei 302 (469)
| ..+.|-.-|++|+.++++.. .|-...+|.|.|. .+.|....+|+.
T Consensus 171 -~--~~~~G~~~~~rr~~f~~vgGFde~~~g~g~ED~Dl~~Rl--~~~G~~i~~~~~ 222 (287)
T 2fy7_A 171 -Y--VQYFGGVSALSKQQFLTINGFPNNYWGWGGEDDDIFNRL--VFRGMSISRPNA 222 (287)
T ss_dssp -S--TTCCCSEEEEEHHHHHHTTSCCSCCSSCSCHHHHHHHHH--HHTTCCCBCCCT
T ss_pred -c--CceeeeEEEEEHHHHHHcCCCCccccccccchHHHHHHH--HHcCCeEEecCc
Confidence 1 23345567899999987642 2333455666765 667777776764
No 15
>2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A*
Probab=96.61 E-value=0.01 Score=56.04 Aligned_cols=98 Identities=10% Similarity=0.135 Sum_probs=62.5
Q ss_pred CCcceEEEEecCChh-HHHHHHHHHhcCCCCCCCcEEEEeCCCChhHHHHHHhhhhcceEeecCCCCCccCCcccccccc
Q psy7047 97 KDAIAIVVIACNRVT-VSRCLDLLIKYRPSVEKFPIIVSQDCNHEATTNVIKSYQNQVHLIQQPNQQDIAVPPKEKKFKG 175 (469)
Q Consensus 97 ~~~iPVlV~a~NRPd-l~RtLesLlk~rp~~~~~~LiVsqDG~~~e~~~vv~~y~~~i~~i~~~d~~~i~~~~~~k~~~~ 175 (469)
.+.+.|+ ++||+.+ |.+||+||.+.-.....++|+|..+|+.+.
T Consensus 15 ~~~iSII-~~yN~~~~l~~~l~sl~~sl~~q~~~EiIVVDn~s~d~---------------------------------- 59 (249)
T 2nxv_A 15 TLMFSVC-SLVRDQAKYDRLLESFERFGFTPDKAEFLAADNREGNQ---------------------------------- 59 (249)
T ss_dssp CCSEEEE-EEESCHHHHHHHHHHHHHTTCCTTTEEEEEEECTTSCS----------------------------------
T ss_pred cceEEEE-EeeCCHHHHHHHHHHHHHhccCCCcEEEEEEECCCCCc----------------------------------
Confidence 3445564 5699999 999999998631111126788888776320
Q ss_pred chhhhhhHHHHHHHhhhhccccEEEEEccCcccCchHHHHHHhhhhhhc-CCCCeeEEec
Q psy7047 176 YFKIARHYGWALNQMFYEFNFSTAIVIEDDLDIAPDFFEYFLGTYPLLI-SDPTLWCVSA 234 (469)
Q Consensus 176 y~~Ia~Hyk~aLs~vF~~~~~~~vIILEDDLvvSPDFf~Yf~~~L~ly~-~D~sI~~ISA 234 (469)
.+++.-.+.|+.. .+.+.+++|..|+.+.|++++=+.+.+.... .++.+.++.+
T Consensus 60 -~g~a~a~N~Gi~~----A~g~yl~fln~D~~~~~~~l~~l~~~~~~~~~~~~~vg~vg~ 114 (249)
T 2nxv_A 60 -FHGFSWHKQMLPR----CKGRYVIFCHEDVELVDRGYDDLVAAIEALEEADPKWLVAGV 114 (249)
T ss_dssp -CCTTTHHHHHGGG----CCSSEEEEEETTEECSSCCHHHHHHHHHHHHHHCTTEEEEES
T ss_pred -ccHHHHHHHHHHh----cCCCEEEEECCCcccCccHHHHHHHHHHhcccCCCCeeEEee
Confidence 0123322334432 3679999999999999999865555443321 1588876653
No 16
>2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A*
Probab=94.33 E-value=0.18 Score=52.00 Aligned_cols=108 Identities=9% Similarity=0.047 Sum_probs=63.3
Q ss_pred EEEEecCChhHHHHHHHHHhcCCCCCCCcEEEEeCCCChhHHHHHHhhhh------cceEeecCCCCCccCCcccccccc
Q psy7047 102 IVVIACNRVTVSRCLDLLIKYRPSVEKFPIIVSQDCNHEATTNVIKSYQN------QVHLIQQPNQQDIAVPPKEKKFKG 175 (469)
Q Consensus 102 VlV~a~NRPdl~RtLesLlk~rp~~~~~~LiVsqDG~~~e~~~vv~~y~~------~i~~i~~~d~~~i~~~~~~k~~~~ 175 (469)
|+|+.||.-.+..+++.|..... ...++|+|..||+.+.|.+++++... .+.++.... ..+...|
T Consensus 3 lVIiP~~eE~I~~vl~~l~~~~~-~~~~EIIVVDDGStD~T~eia~~la~~~~~~~g~~vi~~~~-----~r~~~~n--- 73 (397)
T 2bo4_A 3 LVVFPFKHEHPEVLLHNVRVAAA-HPRVHEVLCIGYERDQTYEAVERAAPEISRATGTPVSVRLQ-----ERLGTLR--- 73 (397)
T ss_dssp EEEEECCSSCHHHHHHHHHHHHH-STTCCEEEEEESSCCHHHHHHHHHHHHHHHHHSCCEEEEEC-----CCCSSSS---
T ss_pred EEEEeCCccCHHHHHHHHHHhcc-CCCeEEEEEECcCCccHHHHHHHhhhhcccccCCeEEEEec-----ccCCCCC---
Confidence 56677775238899998863211 11357999999999999999983321 122221110 0000001
Q ss_pred chhhhhhHHHHHHHhhhhccccEEEEEccCcc-cCchHHHHHHhh
Q psy7047 176 YFKIARHYGWALNQMFYEFNFSTAIVIEDDLD-IAPDFFEYFLGT 219 (469)
Q Consensus 176 y~~Ia~Hyk~aLs~vF~~~~~~~vIILEDDLv-vSPDFf~Yf~~~ 219 (469)
.+...-++.|+.+.....+.+.+++++-|+. ..|+.+.=|-+.
T Consensus 74 -~GkG~Al~~G~~~Al~~a~gd~vv~mDADlq~~~P~~i~~Ll~~ 117 (397)
T 2bo4_A 74 -PGKGDGMNTALRYFLEETQWERIHFYDADITSFGPDWITKAEEA 117 (397)
T ss_dssp -SSHHHHHHHHHHHHHHHCCCSEEEECCTTCSSCCHHHHHHHHHH
T ss_pred -CCHHHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCHHHHHHHHHH
Confidence 1234333444433323347899999999996 799988665543
No 17
>2wvl_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, transferase, glycosyltransferase, retaining mecha glucosyl transferase; HET: GDD; 2.81A {Thermus thermophilus} PDB: 2wvk_A* 2wvm_A*
Probab=89.63 E-value=2.2 Score=44.01 Aligned_cols=135 Identities=16% Similarity=0.193 Sum_probs=81.9
Q ss_pred CcceEEEEecCChhHHHHHHHHHhcCCCCCCCcEEEEeCCCChhH---HHHHHhhhh----cceEeecCCCCCccCCccc
Q psy7047 98 DAIAIVVIACNRVTVSRCLDLLIKYRPSVEKFPIIVSQDCNHEAT---TNVIKSYQN----QVHLIQQPNQQDIAVPPKE 170 (469)
Q Consensus 98 ~~iPVlV~a~NRPdl~RtLesLlk~rp~~~~~~LiVsqDG~~~e~---~~vv~~y~~----~i~~i~~~d~~~i~~~~~~ 170 (469)
..+.|+|-+||=-. ++|++++++-|. ..+|+|-.||+.+.+ .++++.|.. ++..|+|.|.+ +....++
T Consensus 53 ~klSIVVPvYNEe~--~lLesVl~qi~~--d~eIIlVdDGS~D~s~~e~dil~~~~~~~~~ri~viHQkn~g-ls~Ar~~ 127 (391)
T 2wvl_A 53 EQTAIVVPTRNERL--KLLEGVLSGIPH--EALILVASNSSPDRFQMERDLLEEFAHLTERPALIFHQKDPA-LAEALRA 127 (391)
T ss_dssp TTEEEEEEESSCCH--HHHHHHHHTSCT--TSEEEEEECCCHHHHHHHHHHHHHHHHHTTCCEEEEETTCHH-HHHHHHH
T ss_pred hceEEEEeccCcHH--HHHHHHHhcCCC--CceEEEEECCCCCChHhHHHHHHHHHhhcccceEEEeccChH-HHHHHHh
Confidence 46899999999775 469999999765 478999999997766 467777753 46667664420 0000000
Q ss_pred cccc------cchhhhh--hHHHHHHHhhhhccccEEEEEccCcccCchHHHHHHhhhhhhc--CCCCeeEE-ecCCCCC
Q psy7047 171 KKFK------GYFKIAR--HYGWALNQMFYEFNFSTAIVIEDDLDIAPDFFEYFLGTYPLLI--SDPTLWCV-SAWNDNG 239 (469)
Q Consensus 171 k~~~------~y~~Ia~--Hyk~aLs~vF~~~~~~~vIILEDDLvvSPDFf~Yf~~~L~ly~--~D~sI~~I-SAwNdnG 239 (469)
..+. +..+... ...-|+...= ...-++|-+++-|.-++.+-.+|+......+. ..+ --+| =+|+.-.
T Consensus 128 ~G~~~il~~~~~vR~GKGegmi~Gi~~Ak-~~~geYVgFvDADdyi~~~v~Eyvk~yaag~~~a~s~-~~MVRI~wR~kP 205 (391)
T 2wvl_A 128 GGYPHPIGEDGLVRSGKAEGMILALVFAA-LSGRRYVGFIDADNYFPGAVWEYVRAYAAGFLMAKTP-FAMVRILWRYKP 205 (391)
T ss_dssp TTCCTTBCTTSSBCCSHHHHHHHHHHHHH-HTTCSEEEECCSCBSCHHHHHHHHHHHHHHHHHCCSS-EEEEEEECCCCC
T ss_pred cCcchhhcccccccccchHHHHHHHHHHH-hcCCCEEEEEcCcCCCccCHHHHHHHHHHHhcccCCC-cceEEEecccCc
Confidence 0000 0000000 0011221110 01579999999999999999999877666642 233 4455 6888853
No 18
>3tzt_A Glycosyl transferase family 8; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, putative glycosyl transferase; HET: MSE CIT; 2.10A {Anaerococcus prevotii} SCOP: c.68.1.0
Probab=80.47 E-value=9.3 Score=36.82 Aligned_cols=113 Identities=8% Similarity=0.109 Sum_probs=64.9
Q ss_pred CCcceEEEEecCCh--h-HHHHHHHHHhcCCCCCCCcEEEEeCCCChhHHHHHHh----hhhcceEeecCCCCCccCCcc
Q psy7047 97 KDAIAIVVIACNRV--T-VSRCLDLLIKYRPSVEKFPIIVSQDCNHEATTNVIKS----YQNQVHLIQQPNQQDIAVPPK 169 (469)
Q Consensus 97 ~~~iPVlV~a~NRP--d-l~RtLesLlk~rp~~~~~~LiVsqDG~~~e~~~vv~~----y~~~i~~i~~~d~~~i~~~~~ 169 (469)
.+.++|+ ++++.- . +.-++.||+++.+. +...++|..|+-.++..+.++. ++.++..+.- +.......+.
T Consensus 3 ~m~i~I~-~~~d~~Y~~~~~v~i~Sl~~~~~~-~~~~~~il~~~is~~~~~~L~~~~~~~~~~i~~~~~-~~~~~~~~~~ 79 (276)
T 3tzt_A 3 AMADALL-LTLDENYIPQMKVLMTSIYINNPG-RIFDVYLIHSRISEDKLKDLGEDLKKFSYTLYPIRA-TDDLFSFAKV 79 (276)
T ss_dssp --CEEEE-EECCGGGHHHHHHHHHHHHHHSTT-CCEEEEEEESCCCHHHHHHHHHHHHTTTCEEEEEEC-C---------
T ss_pred ceeEEEE-EEeCHhHHHHHHHHHHHHHHhCCC-CceEEEEEeCCCCHHHHHHHHHHHHHcCCEEEEEEe-CHHHHhcCcc
Confidence 3468888 666665 4 99999999999653 4567888889877665444433 4434433321 1111110000
Q ss_pred ccccccchhhhhhHHHHHHHhhhhccccEEEEEccCcccCchHHHHHH
Q psy7047 170 EKKFKGYFKIARHYGWALNQMFYEFNFSTAIVIEDDLDIAPDFFEYFL 217 (469)
Q Consensus 170 ~k~~~~y~~Ia~Hyk~aLs~vF~~~~~~~vIILEDDLvvSPDFf~Yf~ 217 (469)
...+..+..++.-+..+|. ..++++|.|+.|+++--|.-+.++
T Consensus 80 ----~~~~s~~~~~rl~~~~l~p-~~~~kvlylD~D~iv~~di~~L~~ 122 (276)
T 3tzt_A 80 ----TDRYPKEMYYRLLAGEFLP-ENLGEILYLDPDMLVINPLDDLLR 122 (276)
T ss_dssp --------CHHHHHHHTHHHHSC-TTCCEEEEECSSEEECSCSHHHHT
T ss_pred ----ccccCHHHHHHHHHHHHcc-cccCeEEEEeCCeeecCCHHHHhh
Confidence 1112334444555555553 148999999999999888765554
No 19
>1omz_A Alpha-1,4-N-acetylhexosaminyltransferase EXTL2; rossmann fold, DXD motif; HET: UD2; 2.10A {Mus musculus} SCOP: c.68.1.15 PDB: 1omx_A* 1on6_A* 1on8_A*
Probab=71.38 E-value=10 Score=37.71 Aligned_cols=95 Identities=18% Similarity=0.268 Sum_probs=55.8
Q ss_pred cceEEEEecCChh-HHHHHHHHHhcCCCCCCCcEEEEeCCCChh-HHHHHHhhh---hcceEeecCCCCCccCCcccccc
Q psy7047 99 AIAIVVIACNRVT-VSRCLDLLIKYRPSVEKFPIIVSQDCNHEA-TTNVIKSYQ---NQVHLIQQPNQQDIAVPPKEKKF 173 (469)
Q Consensus 99 ~iPVlV~a~NRPd-l~RtLesLlk~rp~~~~~~LiVsqDG~~~e-~~~vv~~y~---~~i~~i~~~d~~~i~~~~~~k~~ 173 (469)
.--|++.+|+|++ |.+.|+.+.+. |... .|+|-=-+++.. .......++ ..+.++.+...+ -+.+|
T Consensus 29 ~FTvvi~ty~R~~~L~~lv~~~~~~-~~v~--~IvVvWn~~~~~pp~~~~~~~~~~~vpv~v~~~~~ns------LnnRF 99 (293)
T 1omz_A 29 SFTLIMQTYNRTDLLLRLLNHYQAV-PSLH--KVIVVWNNVGEKGPEELWNSLGPHPIPVIFKPQTANK------MRNRL 99 (293)
T ss_dssp CEEEEEEESSCHHHHHHHHHHHTTS-TTEE--EEEEEECCTTCCCTHHHHHHTCCCSSCEEEEECSSCC------GGGGG
T ss_pred ceEEEEEeecccHHHHHHHHHHhcC-CCCC--eEEEEeCCCCCCCChhhccccCCCCccEEEEeCCCCc------hhhcc
Confidence 4668889999999 99999998777 4433 365555444322 222233332 234333332110 01111
Q ss_pred ccchhhhhhHHHHHHHhhhhccccEEEEEccCcccCchHHHHHH
Q psy7047 174 KGYFKIARHYGWALNQMFYEFNFSTAIVIEDDLDIAPDFFEYFL 217 (469)
Q Consensus 174 ~~y~~Ia~Hyk~aLs~vF~~~~~~~vIILEDDLvvSPDFf~Yf~ 217 (469)
.. +..+.-+.|..++||+.++.|=++|-=
T Consensus 100 ~p---------------~~~i~T~AVLslDDDv~l~~~el~faF 128 (293)
T 1omz_A 100 QV---------------FPEVETNAVLMVDDDTLISAQDLVFAF 128 (293)
T ss_dssp SC---------------CTTCCSSEEEEECTTEEECHHHHHHHH
T ss_pred CC---------------CccCCcCEEEEEcCCCCCCHHHHHHHH
Confidence 11 223467899999999999999766543
No 20
>1g9r_A Glycosyl transferase; alpha-beta structure; HET: UPF; 2.00A {Neisseria meningitidis} SCOP: c.68.1.4 PDB: 1ga8_A* 1ss9_A*
Probab=71.22 E-value=15 Score=35.61 Aligned_cols=118 Identities=13% Similarity=0.104 Sum_probs=65.8
Q ss_pred EEecCCh--h-HHHHHHHH-HhcCCCCCCCcEEEEeCCCChhHHHHHHhh----hhcceEeecCCCCCccCCcccccccc
Q psy7047 104 VIACNRV--T-VSRCLDLL-IKYRPSVEKFPIIVSQDCNHEATTNVIKSY----QNQVHLIQQPNQQDIAVPPKEKKFKG 175 (469)
Q Consensus 104 V~a~NRP--d-l~RtLesL-lk~rp~~~~~~LiVsqDG~~~e~~~vv~~y----~~~i~~i~~~d~~~i~~~~~~k~~~~ 175 (469)
++++|.- . +.-++.|| +++.+ ....++|..|+-.++..+.++.. +.++..+. .+......-+.. ..
T Consensus 4 ~~~~d~~Y~~~~~vli~Sl~l~~~~--~~~~f~il~~~ls~~~~~~L~~~~~~~~~~i~~~~-~~~~~~~~~~~~---~~ 77 (311)
T 1g9r_A 4 VFAADDNYAAYLCVAAKSVEAAHPD--TEIRFHVLDAGISEANRAAVAANLRGGGGNIRFID-VNPEDFAGFPLN---IR 77 (311)
T ss_dssp EEEECGGGHHHHHHHHHHHHHTCTT--SCCEEEEEESSCCHHHHHHHHHHSGGGTTTEEEEE-CCGGGGTTSCCC---CT
T ss_pred EEECCHhHHHHHHHHHHHHHHHcCC--CCceEEEEECCCCHHHHHHHHHHHHHcCCEEEEEE-cCHHHHhcCccc---cc
Confidence 3555543 4 88899999 77743 35678888888776655555443 43443322 221111100100 11
Q ss_pred chhhhhhHHHHHHHhhhhccccEEEEEccCcccCchHHHHHHhhhhhhcCCCCeeEEe
Q psy7047 176 YFKIARHYGWALNQMFYEFNFSTAIVIEDDLDIAPDFFEYFLGTYPLLISDPTLWCVS 233 (469)
Q Consensus 176 y~~Ia~Hyk~aLs~vF~~~~~~~vIILEDDLvvSPDFf~Yf~~~L~ly~~D~sI~~IS 233 (469)
+...+..++.-|-.+|. .+++||.|+.|+++--|.=+-|+. + -.+..+.++.
T Consensus 78 ~~s~~~y~Rl~l~~ll~--~~~kvlyLD~D~iv~~di~eL~~~--~--l~~~~~aav~ 129 (311)
T 1g9r_A 78 HISITTYARLKLGEYIA--DCDKVLYLDIDVLVRDSLTPLWDT--D--LGDNWLGASI 129 (311)
T ss_dssp TCCGGGGGGGGHHHHCC--SCSCEEEECSSEEECSCCHHHHTC--C--CTTCSEEEEE
T ss_pred cCCHHHHHHHHHHHHhh--hcCEEEEEcCCeEeccCHHHHhcc--C--CCCcEEEEEe
Confidence 22334444445555554 799999999999998876544432 1 1244566654
No 21
>2zu9_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, glycosyltransferase, GT55, GDP, cytoplasm, magnesium, transferase; HET: GDP; 2.00A {Pyrococcus horikoshii} PDB: 2zu7_A* 2zu8_A*
Probab=55.29 E-value=82 Score=32.42 Aligned_cols=46 Identities=26% Similarity=0.490 Sum_probs=32.4
Q ss_pred cceEEEEecCChh-HHHHHHHHHhcCCCCCCCcEEEEeCCCChhH------HHHHHhh
Q psy7047 99 AIAIVVIACNRVT-VSRCLDLLIKYRPSVEKFPIIVSQDCNHEAT------TNVIKSY 149 (469)
Q Consensus 99 ~iPVlV~a~NRPd-l~RtLesLlk~rp~~~~~~LiVsqDG~~~e~------~~vv~~y 149 (469)
.+.|+|-+||--. + +..+++.-|. .++|+|-.||+++.+ .++++.|
T Consensus 52 ~iSVVIP~yNEE~~l---I~~vL~~i~~--~~eIIvVDDgSrD~tD~~~~~~~~l~~~ 104 (394)
T 2zu9_A 52 KMAVIVPMKNEKLHL---VDGVLKAIPH--KCPIIIVSNSKREGPNRYKLEVDLIRHF 104 (394)
T ss_dssp TEEEEEEESSCCHHH---HHHHHHHSCT--TSCEEEEECCCCSSSCHHHHHHHHHHHH
T ss_pred CEEEEEecCcccHHH---HHHHHHcCCC--CcEEEEEECcCcccccchhhHHHHHHHH
Confidence 5889999999986 4 5555554343 357999999997655 5556665
No 22
>3k8d_A 3-deoxy-manno-octulosonate cytidylyltransferase; KDSB synthetase KDO complex, lipopolysaccharide biosynthesis magnesium, nucleotidyltransferase; HET: KDO CTP; 1.90A {Escherichia coli} SCOP: c.68.1.13 PDB: 3k8e_C 1vh1_A 3jtj_A*
Probab=53.39 E-value=1e+02 Score=29.26 Aligned_cols=99 Identities=13% Similarity=0.143 Sum_probs=60.6
Q ss_pred CCCcceEEEEecCChhHHHHHHHHHhcCCCCCCCcEEEEeCCCChhHHHHHHhhhhcceEeecCCCCCccCCcccccccc
Q psy7047 96 SKDAIAIVVIACNRVTVSRCLDLLIKYRPSVEKFPIIVSQDCNHEATTNVIKSYQNQVHLIQQPNQQDIAVPPKEKKFKG 175 (469)
Q Consensus 96 ~~~~iPVlV~a~NRPdl~RtLesLlk~rp~~~~~~LiVsqDG~~~e~~~vv~~y~~~i~~i~~~d~~~i~~~~~~k~~~~ 175 (469)
++...|| +.+|=+.++++.+.+.. . ..|+|..| .++..+.++.++.++.+..+ +. .
T Consensus 34 ~K~L~~i----~GkPmi~~~l~~l~~~~--i--~~IvV~t~--~~~i~~~~~~~g~~v~~~~~-~~-----------~-- 89 (264)
T 3k8d_A 34 GKPLVDI----NGKPMIVHVLERARESG--A--ERIIVATD--HEDVARAVEAAGGEVCMTRA-DH-----------Q-- 89 (264)
T ss_dssp TGGGCEE----TTEEHHHHHHHHHHHTT--C--SEEEEEES--CHHHHHHHHHTTCEEEECCT-TC-----------C--
T ss_pred CcceeeE----CCeEHHHHHHHHHHhCC--C--CEEEEECC--HHHHHHHHHHcCCEEEEecC-CC-----------C--
Confidence 4555555 78888999999999873 2 25888886 45667777777644321111 10 0
Q ss_pred chhhhhhHHHHHHHhhhhccccEEEEEccCc-ccCchHHHHHHhhhh
Q psy7047 176 YFKIARHYGWALNQMFYEFNFSTAIVIEDDL-DIAPDFFEYFLGTYP 221 (469)
Q Consensus 176 y~~Ia~Hyk~aLs~vF~~~~~~~vIILEDDL-vvSPDFf~Yf~~~L~ 221 (469)
.+.++ ...|+..+ ..-..+.++++-=|. .++|+.+.-+-+.+.
T Consensus 90 -~Gt~~-i~~~~~~l-~~~~~d~vlv~~gD~Pli~~~~i~~li~~~~ 133 (264)
T 3k8d_A 90 -SGTER-LAEVVEKC-AFSDDTVIVNVQGDEPMIPATIIRQVADNLA 133 (264)
T ss_dssp -SHHHH-HHHHHHHH-TCCTTCEEEEECTTCTTCCHHHHHHHHHHHH
T ss_pred -CCHHH-HHHHHHHh-ccCCCCEEEEEcCCcccCCHHHHHHHHHHHh
Confidence 12232 34455543 111578899999998 678888866655554
No 23
>3oam_A 3-deoxy-manno-octulosonate cytidylyltransferase; center for structural genomics of infectious diseases; 1.75A {Vibrio cholerae o1 biovar el tor} SCOP: c.68.1.13
Probab=49.28 E-value=1e+02 Score=28.63 Aligned_cols=98 Identities=12% Similarity=0.145 Sum_probs=60.1
Q ss_pred CCCcceEEEEecCChhHHHHHHHHHhcCCCCCCCcEEEEeCCCChhHHHHHHhhhhcceEeecCCCCCccCCcccccccc
Q psy7047 96 SKDAIAIVVIACNRVTVSRCLDLLIKYRPSVEKFPIIVSQDCNHEATTNVIKSYQNQVHLIQQPNQQDIAVPPKEKKFKG 175 (469)
Q Consensus 96 ~~~~iPVlV~a~NRPdl~RtLesLlk~rp~~~~~~LiVsqDG~~~e~~~vv~~y~~~i~~i~~~d~~~i~~~~~~k~~~~ 175 (469)
++...|| +++|=+.++++++.+.. . ..|+|..| .+++.+.++.++.++.+..+ +. .
T Consensus 18 ~K~L~~i----~GkPli~~~l~~l~~~~-~---~~ivVv~~--~~~i~~~~~~~g~~v~~~~~-~~-----------~-- 73 (252)
T 3oam_A 18 GKPLADI----GGKPMIQWVYEQAMQAG-A---DRVIIATD--DERVEQAVQAFGGVVCMTSP-NH-----------Q-- 73 (252)
T ss_dssp TGGGCEE----TTEEHHHHHHHHHHHTT-C---SEEEEEES--CHHHHHHHHHTTCEEEECCT-TC-----------C--
T ss_pred CcceeeE----CCEEHHHHHHHHHHhCC-C---CeEEEECC--HHHHHHHHHHcCCEEEEcCC-CC-----------C--
Confidence 4556666 78998999999999874 2 25888886 46667777777644322111 10 0
Q ss_pred chhhhhhHHHHHHHhhhhccccEEEEEccCc-ccCchHHHHHHhhh
Q psy7047 176 YFKIARHYGWALNQMFYEFNFSTAIVIEDDL-DIAPDFFEYFLGTY 220 (469)
Q Consensus 176 y~~Ia~Hyk~aLs~vF~~~~~~~vIILEDDL-vvSPDFf~Yf~~~L 220 (469)
.+.++ ...++..+ .....+.++|+-=|. .++|+.+.-+-+.+
T Consensus 74 -~Gt~~-~~~~~~~l-~~~~~d~vlv~~gD~Pli~~~~i~~l~~~~ 116 (252)
T 3oam_A 74 -SGTER-LAEVVAKM-AIPADHIVVNVQGDEPLIPPAIIRQVADNL 116 (252)
T ss_dssp -SHHHH-HHHHHHHT-TCCTTSEEEECCTTCTTCCHHHHHHHHHHH
T ss_pred -CcHHH-HHHHHHhc-CcCCCCEEEEEeCCeeecCHHHHHHHHHHH
Confidence 12222 33455442 101478899999998 67888776555544
No 24
>3st8_A Bifunctional protein GLMU; acetyltransferase, pyrophosphorylase, rossmann fold, LEFT-handed-beta-helix, cell shape; HET: COA GP1 UD1; 1.98A {Mycobacterium tuberculosis} PDB: 3spt_A* 3foq_A 3dk5_A 3d8v_A 3d98_A* 3dj4_A 2qkx_A*
Probab=32.99 E-value=1.4e+02 Score=30.58 Aligned_cols=112 Identities=12% Similarity=0.128 Sum_probs=60.3
Q ss_pred EecCChhHHHHHHHHHhcCCCCCCCcEEEEeCCCCh-hHHHHHH----hhhhcceEeecCCCCCccCCccccccccchhh
Q psy7047 105 IACNRVTVSRCLDLLIKYRPSVEKFPIIVSQDCNHE-ATTNVIK----SYQNQVHLIQQPNQQDIAVPPKEKKFKGYFKI 179 (469)
Q Consensus 105 ~a~NRPdl~RtLesLlk~rp~~~~~~LiVsqDG~~~-e~~~vv~----~y~~~i~~i~~~d~~~i~~~~~~k~~~~y~~I 179 (469)
-.++||=+..+|++|.+.... .++|.. |... .+.+.+. .++..+.++.|... .+.
T Consensus 36 pv~gkp~i~~~l~~~~~~g~~----~i~vv~-~~~~~~i~~~~~~~~~~~~~~i~~~~q~~~---------------lGT 95 (501)
T 3st8_A 36 TLAGRSMLSHVLHAIAKLAPQ----RLIVVL-GHDHQRIAPLVGELADTLGRTIDVALQDRP---------------LGT 95 (501)
T ss_dssp EETTEEHHHHHHHHHHHHCCS----EEEEEE-CTTHHHHHHHHHHHHHHHTSCCEEEECSSC---------------CCH
T ss_pred EECChhHHHHHHHHHHhCCCC----EEEEEe-CCCHHHHHHHHHHHHHhcCCcEEEEEcCCC---------------CCc
Confidence 348999999999999998432 355554 3333 3444443 33445666555321 134
Q ss_pred hhhHHHHHHHhhhhccccEEEEEccCcccCchHHHHHHhhhhhhcCCCCeeEEecCC
Q psy7047 180 ARHYGWALNQMFYEFNFSTAIVIEDDLDIAPDFFEYFLGTYPLLISDPTLWCVSAWN 236 (469)
Q Consensus 180 a~Hyk~aLs~vF~~~~~~~vIILEDDLvvSPDFf~Yf~~~L~ly~~D~sI~~ISAwN 236 (469)
+.-.+.|+..+-+.+.-.-+|+.-|+..+.++.+.=|.+....-..+-+|++...=|
T Consensus 96 a~Av~~a~~~l~~~~~~~~lvl~gd~~l~~~~~~~~l~~~h~~~~~~~ti~~~~~~d 152 (501)
T 3st8_A 96 GHAVLCGLSALPDDYAGNVVVTSGDTPLLDADTLADLIATHRAVSAAVTVLTTTLDD 152 (501)
T ss_dssp HHHHHHHHTTSCTTCCSEEEEEETTCTTCCHHHHHHHHHHHHHTTCSEEEEEEECSC
T ss_pred HHHHHHHHHHhccccccceeeecCcceeecHHHHHHHHHHHhhccccceEeeeccCC
Confidence 442223444332211223445556666788887765555544444555565555433
No 25
>3qle_A TIM50P; chaperone, mitochondrion, preprotein translocation; HET: 1PE; 1.83A {Saccharomyces cerevisiae EC1118}
Probab=28.39 E-value=43 Score=31.20 Aligned_cols=41 Identities=12% Similarity=0.193 Sum_probs=33.0
Q ss_pred EecCChhHHHHHHHHHhcCCCCCCCcEEEEeCCCChhHHHHHHhhhh
Q psy7047 105 IACNRVTVSRCLDLLIKYRPSVEKFPIIVSQDCNHEATTNVIKSYQN 151 (469)
Q Consensus 105 ~a~NRPdl~RtLesLlk~rp~~~~~~LiVsqDG~~~e~~~vv~~y~~ 151 (469)
-++.||.+..-|+.+.+. ++|+|+.-+...-+..+++..+.
T Consensus 57 ~v~~RPgl~eFL~~l~~~------yeivI~Tas~~~ya~~vl~~LDp 97 (204)
T 3qle_A 57 RTAKRPGADYFLGYLSQY------YEIVLFSSNYMMYSDKIAEKLDP 97 (204)
T ss_dssp EEEECTTHHHHHHHHTTT------EEEEEECSSCHHHHHHHHHHTST
T ss_pred eEEeCCCHHHHHHHHHhC------CEEEEEcCCcHHHHHHHHHHhCC
Confidence 468899999999998633 68999999998777778877653
No 26
>3u2u_A Glycogenin-1, GN-1, GN1; structural genomics, structural genomics consortium, SGC, transferase, glycosyltransferase, glycogen biosynthesis; HET: GLC UDP; 1.45A {Homo sapiens} SCOP: c.68.1.14 PDB: 3t7n_A* 3t7o_A* 3t7m_A* 3u2v_A* 3u2x_A* 3u2t_A 3rmv_A* 3rmw_A* 3u2w_A* 3qvb_A* 3q4s_A* 1zct_A* 3v8y_A 3v8z_A* 3usr_A 3v90_A 3v91_A* 3usq_A
Probab=24.49 E-value=3.1e+02 Score=26.16 Aligned_cols=99 Identities=13% Similarity=0.151 Sum_probs=53.6
Q ss_pred eEEEEecCCh--h-HHHHHHHHHhcCCCCCCCcEEEEe-CCCChhHHHHHHhhhhcceEeecCCCCCc-cCC-ccccc-c
Q psy7047 101 AIVVIACNRV--T-VSRCLDLLIKYRPSVEKFPIIVSQ-DCNHEATTNVIKSYQNQVHLIQQPNQQDI-AVP-PKEKK-F 173 (469)
Q Consensus 101 PVlV~a~NRP--d-l~RtLesLlk~rp~~~~~~LiVsq-DG~~~e~~~vv~~y~~~i~~i~~~d~~~i-~~~-~~~k~-~ 173 (469)
+-+-++.|.- . +.-++.||++..+. .+++|.. |+-.++..+..+..+.++..+...+..+. ... ..... .
T Consensus 6 AyvTl~td~~Yl~ga~vL~~SL~~~~s~---~~lvvLvt~~vs~~~~~~L~~~~~~vi~V~~l~~~~~~~~~~~~rp~~~ 82 (263)
T 3u2u_A 6 AFVTLTTNDAYAKGALVLGSSLKQHRTT---RRLVVLATPQVSDSMRKVLETVFDEVIMVDVLDSGDSAHLTLMKRPELG 82 (263)
T ss_dssp EEEEEESSHHHHHHHHHHHHHHHHTTCC---SEEEEEECTTSCHHHHHHHHHHSSEEEECCCCCCCCHHHHHHTTCTTGG
T ss_pred EEEEEEECHHHHHHHHHHHHHHHHhCCC---CCEEEEecCCCCHHHHHHHHHcCCeEEEeeecCCcchhhhhhhcCcchh
Confidence 3444566665 3 77788889887543 3566554 55566667777776655443332221000 000 00000 0
Q ss_pred ccchhhhhhHHHHHHHhhhhccccEEEEEccCcccCch
Q psy7047 174 KGYFKIARHYGWALNQMFYEFNFSTAIVIEDDLDIAPD 211 (469)
Q Consensus 174 ~~y~~Ia~Hyk~aLs~vF~~~~~~~vIILEDDLvvSPD 211 (469)
..|.++ .+|+..+|+++|.|+-|+++--+
T Consensus 83 ~~~~kl---------~~~~l~~~~~vlylD~D~~v~~~ 111 (263)
T 3u2u_A 83 VTLTKL---------HCWSLTQYSKCVFMDADTLVLAN 111 (263)
T ss_dssp GGGGGG---------GGGGCTTCSEEEEECTTEEECSC
T ss_pred HHhHHH---------HhccccCcceEEEEcCCEeeccC
Confidence 111121 23444479999999999999665
No 27
>3tqd_A 3-deoxy-manno-octulosonate cytidylyltransferase; cell envelope; 1.80A {Coxiella burnetii} SCOP: c.68.1.0
Probab=22.87 E-value=4.7e+02 Score=24.43 Aligned_cols=98 Identities=13% Similarity=0.148 Sum_probs=59.8
Q ss_pred CCCcceEEEEecCChhHHHHHHHHHhcCCCCCCCcEEEEeCCCChhHHHHHHhhhhcceEeecCCCCCccCCcccccccc
Q psy7047 96 SKDAIAIVVIACNRVTVSRCLDLLIKYRPSVEKFPIIVSQDCNHEATTNVIKSYQNQVHLIQQPNQQDIAVPPKEKKFKG 175 (469)
Q Consensus 96 ~~~~iPVlV~a~NRPdl~RtLesLlk~rp~~~~~~LiVsqDG~~~e~~~vv~~y~~~i~~i~~~d~~~i~~~~~~k~~~~ 175 (469)
++..+|| +++|=+.++++.+.+.. . ..|+|..| .++..+.++.++.++.+. .++. .
T Consensus 25 ~K~L~~i----~GkPli~~~l~~l~~~~--i--~~VvVvt~--~~~i~~~~~~~g~~v~~~-~~~~-----------~-- 80 (256)
T 3tqd_A 25 GKALVDI----AGKPMIQHVYESAIKSG--A--EEVVIATD--DKRIRQVAEDFGAVVCMT-SSDH-----------Q-- 80 (256)
T ss_dssp TGGGCEE----TTEEHHHHHHHHHHHTT--C--SEEEEEES--CHHHHHHHHHTTCEEEEC-CTTC-----------C--
T ss_pred CCCeeeE----CCchHHHHHHHHHHhCC--C--CEEEEECC--HHHHHHHHHHcCCeEEEe-CCCC-----------C--
Confidence 4555665 68888999999999873 2 25888886 466777777776543221 1110 0
Q ss_pred chhhhhhHHHHHHHhhhhccccEEEEEccCc-ccCchHHHHHHhhh
Q psy7047 176 YFKIARHYGWALNQMFYEFNFSTAIVIEDDL-DIAPDFFEYFLGTY 220 (469)
Q Consensus 176 y~~Ia~Hyk~aLs~vF~~~~~~~vIILEDDL-vvSPDFf~Yf~~~L 220 (469)
.+.++ ...|+..+ ..-..+.++++-=|. .++|+.+.-+-+.+
T Consensus 81 -~Gt~~-i~~a~~~l-~~~~~d~vlv~~gD~Pli~~~~i~~li~~~ 123 (256)
T 3tqd_A 81 -SGTER-IAEAAVAL-GFEDDEIIVCLQGDEPLIPPDAIRKLAEDL 123 (256)
T ss_dssp -SHHHH-HHHHHHHT-TCCTTCEEEEECTTCCCCCHHHHHHHHHHH
T ss_pred -CcHHH-HHHHHHHh-CcCCCCEEEEEeCCcccCCHHHHHHHHHHH
Confidence 12332 34465542 101468899999888 77888876554443
No 28
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=22.50 E-value=3.4e+02 Score=24.93 Aligned_cols=50 Identities=10% Similarity=-0.001 Sum_probs=33.9
Q ss_pred eEEEEecCChh-HHHHHHHHHhcCCCCCCCcEEEEeCCCChhHHHHHHhhhhc
Q psy7047 101 AIVVIACNRVT-VSRCLDLLIKYRPSVEKFPIIVSQDCNHEATTNVIKSYQNQ 152 (469)
Q Consensus 101 PVlV~a~NRPd-l~RtLesLlk~rp~~~~~~LiVsqDG~~~e~~~vv~~y~~~ 152 (469)
.|+|++.-.++ +..+|++|.+..... . -+.|.+|-++..+.+.+++++-.
T Consensus 5 ki~vl~sG~g~~~~~~l~~l~~~~l~~-~-I~~Vit~~~~~~v~~~A~~~gIp 55 (212)
T 3av3_A 5 RLAVFASGSGTNFQAIVDAAKRGDLPA-R-VALLVCDRPGAKVIERAARENVP 55 (212)
T ss_dssp EEEEECCSSCHHHHHHHHHHHTTCCCE-E-EEEEEESSTTCHHHHHHHHTTCC
T ss_pred EEEEEEECCcHHHHHHHHHHHhCCCCC-e-EEEEEeCCCCcHHHHHHHHcCCC
Confidence 58889899999 999999998763211 1 23455565555666777777643
No 29
>3s8f_C Cytochrome C oxidase polypeptide 2A; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 2qpd_C* 2qpe_C* 3bvd_C* 3qjq_C* 3qjr_C* 3qjs_C* 3qjt_C* 3qju_C* 3qjv_C* 1xme_C* 3s8g_C* 4esl_C* 4ev3_C* 4f05_C* 4fa7_C* 4faa_C* 1ehk_C* 3eh3_C* 3eh4_C* 3eh5_C* ...
Probab=20.68 E-value=68 Score=22.08 Aligned_cols=22 Identities=27% Similarity=0.525 Sum_probs=15.5
Q ss_pred chhhHHHHHHHHHHHHHHHhhCC
Q psy7047 6 YILICALSLSLWVFVSHYVFLGR 28 (469)
Q Consensus 6 ~~~~~~~~~~~w~~~~~~~~~~~ 28 (469)
..+.|++.+++|..+- .+|+.|
T Consensus 12 V~ilg~~I~i~W~~vf-~lFl~R 33 (34)
T 3s8f_C 12 ILVLTLTILVFWLGVY-AVFFAR 33 (34)
T ss_dssp HHHHHHHHHHHHHHHH-HHHHHT
T ss_pred HHHHHHHHHHHHHHHH-eeeecC
Confidence 3456888899998876 444555
No 30
>2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens}
Probab=20.29 E-value=1.1e+02 Score=27.75 Aligned_cols=42 Identities=14% Similarity=0.122 Sum_probs=34.4
Q ss_pred EEecCChhHHHHHHHHHhcCCCCCCCcEEEEeCCCChhHHHHHHhhhh
Q psy7047 104 VIACNRVTVSRCLDLLIKYRPSVEKFPIIVSQDCNHEATTNVIKSYQN 151 (469)
Q Consensus 104 V~a~NRPdl~RtLesLlk~rp~~~~~~LiVsqDG~~~e~~~vv~~y~~ 151 (469)
+.+..||.+...|+.|.+. +++.|+.-+++..+..+++..+.
T Consensus 65 ~~v~~RPgv~efL~~l~~~------~~i~I~Tss~~~~a~~vl~~ld~ 106 (195)
T 2hhl_A 65 VYVLKRPHVDEFLQRMGQL------FECVLFTASLAKYADPVADLLDR 106 (195)
T ss_dssp EEEEECTTHHHHHHHHHHH------SEEEEECSSCHHHHHHHHHHHCC
T ss_pred EEEEeCcCHHHHHHHHHcC------CeEEEEcCCCHHHHHHHHHHhCC
Confidence 3467799999999999876 36999999998888888877753
Done!