BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy7050
(61 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|332373880|gb|AEE62081.1| unknown [Dendroctonus ponderosae]
Length = 168
Score = 128 bits (322), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 61/61 (100%), Positives = 61/61 (100%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV
Sbjct: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
Query: 61 R 61
R
Sbjct: 61 R 61
>gi|307169015|gb|EFN61874.1| Splicing factor, arginine/serine-rich 2 [Camponotus floridanus]
Length = 208
Score = 125 bits (314), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 59/61 (96%), Positives = 61/61 (100%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPPRI+GMVSLKVDNLTYRTTP+DLRRVFERCGEVGDIYIPRDRFTRESRGFAFV
Sbjct: 1 MSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
Query: 61 R 61
R
Sbjct: 61 R 61
>gi|345486316|ref|XP_003425445.1| PREDICTED: serine/arginine-rich splicing factor 2-like [Nasonia
vitripennis]
Length = 198
Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/61 (96%), Positives = 61/61 (100%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPPRI+GMVSLKVDNLTYRTTP+DLRRVFERCGEVGDIYIPRDRFTRESRGFAFV
Sbjct: 1 MSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
Query: 61 R 61
R
Sbjct: 61 R 61
>gi|322789593|gb|EFZ14819.1| hypothetical protein SINV_10987 [Solenopsis invicta]
gi|332021256|gb|EGI61641.1| Splicing factor, arginine/serine-rich 2 [Acromyrmex echinatior]
Length = 175
Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/61 (96%), Positives = 61/61 (100%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPPRI+GMVSLKVDNLTYRTTP+DLRRVFERCGEVGDIYIPRDRFTRESRGFAFV
Sbjct: 1 MSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
Query: 61 R 61
R
Sbjct: 61 R 61
>gi|307197633|gb|EFN78812.1| Splicing factor, arginine/serine-rich 2 [Harpegnathos saltator]
Length = 175
Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/61 (96%), Positives = 61/61 (100%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPPRI+GMVSLKVDNLTYRTTP+DLRRVFERCGEVGDIYIPRDRFTRESRGFAFV
Sbjct: 1 MSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
Query: 61 R 61
R
Sbjct: 61 R 61
>gi|240849499|ref|NP_001155685.1| serine/arginine rich splicing factor-like [Acyrthosiphon pisum]
gi|239790824|dbj|BAH71947.1| ACYPI006902 [Acyrthosiphon pisum]
Length = 153
Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/61 (96%), Positives = 60/61 (98%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSY RPPPRIEGMVSLKVDNLTYRTTP+DLRRVFERCGEVGDIYIPRDRFTRESRGFAFV
Sbjct: 1 MSYSRPPPRIEGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
Query: 61 R 61
R
Sbjct: 61 R 61
>gi|242005811|ref|XP_002423754.1| serine/arginine rich splicing factor, putative [Pediculus humanus
corporis]
gi|212506956|gb|EEB11016.1| serine/arginine rich splicing factor, putative [Pediculus humanus
corporis]
Length = 246
Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 57/61 (93%), Positives = 61/61 (100%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+SYGRPPPRI+GMVSLKVDNLT+RTTPDDLRRVFERCGEVGDIYIPRDRF+RESRGFAFV
Sbjct: 48 VSYGRPPPRIDGMVSLKVDNLTFRTTPDDLRRVFERCGEVGDIYIPRDRFSRESRGFAFV 107
Query: 61 R 61
R
Sbjct: 108 R 108
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 37/48 (77%)
Query: 13 MVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
M SLKV N++YRT DL +F + G+VGD+YIPRD+ ++ SRGFAFV
Sbjct: 1 MTSLKVGNISYRTRTLDLHHIFGKFGDVGDVYIPRDKHSKHSRGFAFV 48
>gi|110762781|ref|XP_393352.2| PREDICTED: serine/arginine-rich splicing factor 2-like [Apis
mellifera]
gi|340724784|ref|XP_003400761.1| PREDICTED: serine/arginine-rich splicing factor 2-like [Bombus
terrestris]
gi|350398198|ref|XP_003485116.1| PREDICTED: serine/arginine-rich splicing factor 2-like [Bombus
impatiens]
gi|380022396|ref|XP_003695032.1| PREDICTED: serine/arginine-rich splicing factor 2-like [Apis
florea]
gi|383865619|ref|XP_003708270.1| PREDICTED: serine/arginine-rich splicing factor 2-like [Megachile
rotundata]
Length = 176
Score = 122 bits (306), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 59/61 (96%), Positives = 61/61 (100%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPPRI+GMVSLKVDNLTYRTTP+DLRRVFERCGEVGDIYIPRDRFTRESRGFAFV
Sbjct: 1 MSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
Query: 61 R 61
R
Sbjct: 61 R 61
>gi|270012859|gb|EFA09307.1| hypothetical protein TcasGA2_TC030627 [Tribolium castaneum]
Length = 161
Score = 120 bits (302), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 58/61 (95%), Positives = 61/61 (100%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPPRI+GMVSLKVDNLTYRTTP+DLRRVFERCG+VGDIYIPRDRFTRESRGFAFV
Sbjct: 1 MSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGDVGDIYIPRDRFTRESRGFAFV 60
Query: 61 R 61
R
Sbjct: 61 R 61
>gi|357608819|gb|EHJ66166.1| putative serine/arginine rich splicing factor [Danaus plexippus]
Length = 165
Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/61 (95%), Positives = 61/61 (100%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPPRI+GMVSLKVDNLTYRTTPDDLRRVFERCG+VGDIYIPRDR+TRESRGFAFV
Sbjct: 1 MSYGRPPPRIDGMVSLKVDNLTYRTTPDDLRRVFERCGDVGDIYIPRDRYTRESRGFAFV 60
Query: 61 R 61
R
Sbjct: 61 R 61
>gi|114050755|ref|NP_001040152.1| Sr protein [Bombyx mori]
gi|87248221|gb|ABD36163.1| Sr protein [Bombyx mori]
Length = 154
Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/61 (95%), Positives = 61/61 (100%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPPRI+GMVSLKVDNLTYRTTP+DLRRVFERCGEVGDIYIPRDR+TRESRGFAFV
Sbjct: 1 MSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFV 60
Query: 61 R 61
R
Sbjct: 61 R 61
>gi|348019723|gb|AEP43803.1| SR-protein [Biston betularia]
Length = 152
Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/61 (95%), Positives = 61/61 (100%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPPRI+GMVSLKVDNLTYRTTP+DLRRVFERCGEVGDIYIPRDR+TRESRGFAFV
Sbjct: 1 MSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFV 60
Query: 61 R 61
R
Sbjct: 61 R 61
>gi|170041667|ref|XP_001848576.1| serine/arginine rich splicing factor [Culex quinquefasciatus]
gi|167865236|gb|EDS28619.1| serine/arginine rich splicing factor [Culex quinquefasciatus]
Length = 186
Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/60 (96%), Positives = 59/60 (98%)
Query: 2 SYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
SYGRPPPRI+GMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDR TRESRGFAFVR
Sbjct: 3 SYGRPPPRIDGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRHTRESRGFAFVR 62
>gi|443429415|gb|AGC92700.1| serine/arginine-rich splicing factor 2-like protein [Heliconius
erato]
Length = 168
Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/61 (93%), Positives = 61/61 (100%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPPRI+GMVSLKVDNLTYRTTP+DLRRVFERCG+VGDIYIPRDR+TRESRGFAFV
Sbjct: 1 MSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGDVGDIYIPRDRYTRESRGFAFV 60
Query: 61 R 61
R
Sbjct: 61 R 61
>gi|157125941|ref|XP_001654458.1| serine/arginine rich splicing factor [Aedes aegypti]
gi|157125943|ref|XP_001654459.1| serine/arginine rich splicing factor [Aedes aegypti]
gi|94469018|gb|ABF18358.1| predicted splicing factor [Aedes aegypti]
gi|108873468|gb|EAT37693.1| AAEL010340-PA [Aedes aegypti]
gi|108873469|gb|EAT37694.1| AAEL010340-PB [Aedes aegypti]
Length = 177
Score = 119 bits (298), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/60 (95%), Positives = 59/60 (98%)
Query: 2 SYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
SYGRPPPRI+GM+SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDR TRESRGFAFVR
Sbjct: 3 SYGRPPPRIDGMISLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRHTRESRGFAFVR 62
>gi|261335957|emb|CBH09290.1| putative Sr protein [Heliconius melpomene]
Length = 165
Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/61 (93%), Positives = 61/61 (100%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPPRI+GMVSLKVDNLTYRTTP+DLRRVFERCG+VGDIYIPRDR+TRESRGFAFV
Sbjct: 1 MSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGDVGDIYIPRDRYTRESRGFAFV 60
Query: 61 R 61
R
Sbjct: 61 R 61
>gi|118790804|ref|XP_318826.3| AGAP009742-PA [Anopheles gambiae str. PEST]
gi|116118108|gb|EAA14228.3| AGAP009742-PA [Anopheles gambiae str. PEST]
Length = 174
Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 55/59 (93%), Positives = 57/59 (96%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
Y RPPPRI+GM+SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDR TRESRGFAFVR
Sbjct: 11 YARPPPRIDGMISLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRHTRESRGFAFVR 69
>gi|312373610|gb|EFR21320.1| hypothetical protein AND_17210 [Anopheles darlingi]
Length = 170
Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 55/59 (93%), Positives = 57/59 (96%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
Y RPPPRI+GM+SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDR TRESRGFAFVR
Sbjct: 4 YARPPPRIDGMISLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRHTRESRGFAFVR 62
>gi|226423972|gb|ACO53091.1| MIP01221p [Drosophila melanogaster]
Length = 195
Score = 115 bits (288), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 55/57 (96%), Positives = 57/57 (100%)
Query: 5 RPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
RPPPRI+GMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDR+TRESRGFAFVR
Sbjct: 14 RPPPRIDGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVR 70
>gi|289741385|gb|ADD19440.1| putative splicing factor [Glossina morsitans morsitans]
Length = 191
Score = 115 bits (287), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 55/60 (91%), Positives = 59/60 (98%)
Query: 2 SYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
S GRPPPRI+GM+SLKVDNLTYRTTP+DLRRVFERCGEVGDIYIPRDR+TRESRGFAFVR
Sbjct: 5 SGGRPPPRIDGMISLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVR 64
>gi|198474085|ref|XP_001356555.2| GA18884 [Drosophila pseudoobscura pseudoobscura]
gi|198138240|gb|EAL33619.2| GA18884 [Drosophila pseudoobscura pseudoobscura]
Length = 207
Score = 114 bits (286), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 54/57 (94%), Positives = 57/57 (100%)
Query: 5 RPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
RPPPRI+GMVSLKVDNLTYRTTP+DLRRVFERCGEVGDIYIPRDR+TRESRGFAFVR
Sbjct: 14 RPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVR 70
>gi|195035777|ref|XP_001989348.1| GH11678 [Drosophila grimshawi]
gi|193905348|gb|EDW04215.1| GH11678 [Drosophila grimshawi]
Length = 203
Score = 114 bits (284), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 54/58 (93%), Positives = 57/58 (98%)
Query: 4 GRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
RPPPRI+GMVSLKVDNLTYRTTP+DLRRVFERCGEVGDIYIPRDR+TRESRGFAFVR
Sbjct: 13 ARPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVR 70
>gi|195351055|ref|XP_002042052.1| GM26218 [Drosophila sechellia]
gi|195578745|ref|XP_002079224.1| GD22120 [Drosophila simulans]
gi|194123876|gb|EDW45919.1| GM26218 [Drosophila sechellia]
gi|194191233|gb|EDX04809.1| GD22120 [Drosophila simulans]
Length = 195
Score = 114 bits (284), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 54/57 (94%), Positives = 57/57 (100%)
Query: 5 RPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
RPPPRI+GMVSLKVDNLTYRTTP+DLRRVFERCGEVGDIYIPRDR+TRESRGFAFVR
Sbjct: 14 RPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVR 70
>gi|21358099|ref|NP_652612.1| SC35, isoform B [Drosophila melanogaster]
gi|320545008|ref|NP_001188794.1| SC35, isoform C [Drosophila melanogaster]
gi|386769542|ref|NP_001246005.1| SC35, isoform D [Drosophila melanogaster]
gi|7243688|gb|AAF43415.1|AF232775_1 SR family splicing factor SC35 [Drosophila melanogaster]
gi|7297948|gb|AAF53192.1| SC35, isoform B [Drosophila melanogaster]
gi|17862504|gb|AAL39729.1| LD32469p [Drosophila melanogaster]
gi|220944588|gb|ACL84837.1| SC35-PA [synthetic construct]
gi|220954528|gb|ACL89807.1| SC35-PA [synthetic construct]
gi|318068433|gb|ADV37044.1| SC35, isoform C [Drosophila melanogaster]
gi|383291463|gb|AFH03679.1| SC35, isoform D [Drosophila melanogaster]
Length = 195
Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/57 (94%), Positives = 57/57 (100%)
Query: 5 RPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
RPPPRI+GMVSLKVDNLTYRTTP+DLRRVFERCGEVGDIYIPRDR+TRESRGFAFVR
Sbjct: 14 RPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVR 70
>gi|195401200|ref|XP_002059202.1| GJ16161 [Drosophila virilis]
gi|194156076|gb|EDW71260.1| GJ16161 [Drosophila virilis]
Length = 202
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/57 (94%), Positives = 57/57 (100%)
Query: 5 RPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
RPPPRI+GMVSLKVDNLTYRTTP+DLRRVFERCGEVGDIYIPRDR+TRESRGFAFVR
Sbjct: 15 RPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVR 71
>gi|195435065|ref|XP_002065522.1| GK14626 [Drosophila willistoni]
gi|194161607|gb|EDW76508.1| GK14626 [Drosophila willistoni]
Length = 203
Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/57 (94%), Positives = 57/57 (100%)
Query: 5 RPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
RPPPRI+GMVSLKVDNLTYRTTP+DLRRVFERCGEVGDIYIPRDR+TRESRGFAFVR
Sbjct: 16 RPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVR 72
>gi|194861231|ref|XP_001969737.1| GG10262 [Drosophila erecta]
gi|190661604|gb|EDV58796.1| GG10262 [Drosophila erecta]
Length = 195
Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/57 (94%), Positives = 57/57 (100%)
Query: 5 RPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
RPPPRI+GMVSLKVDNLTYRTTP+DLRRVFERCGEVGDIYIPRDR+TRESRGFAFVR
Sbjct: 14 RPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVR 70
>gi|195114806|ref|XP_002001958.1| GI17122 [Drosophila mojavensis]
gi|193912533|gb|EDW11400.1| GI17122 [Drosophila mojavensis]
Length = 203
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/58 (93%), Positives = 57/58 (98%)
Query: 4 GRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
RPPPRI+GMVSLKVDNLTYRTTP+DLRRVFERCGEVGDIYIPRDR+TRESRGFAFVR
Sbjct: 14 ARPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVR 71
>gi|194761376|ref|XP_001962905.1| GF15672 [Drosophila ananassae]
gi|190616602|gb|EDV32126.1| GF15672 [Drosophila ananassae]
Length = 199
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/58 (93%), Positives = 57/58 (98%)
Query: 4 GRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
RPPPRI+GMVSLKVDNLTYRTTP+DLRRVFERCGEVGDIYIPRDR+TRESRGFAFVR
Sbjct: 10 ARPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVR 67
>gi|431908736|gb|ELK12328.1| Splicing factor, arginine/serine-rich 2 [Pteropus alecto]
Length = 178
Score = 111 bits (278), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 50/61 (81%), Positives = 56/61 (91%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPP +EGM SLKVDNLTYRT+PD LRRVFE+ G VGD+YIPRDR+T+ESRGFAFV
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 61 R 61
R
Sbjct: 61 R 61
>gi|119609848|gb|EAW89442.1| splicing factor, arginine/serine-rich 2, isoform CRA_c [Homo
sapiens]
Length = 163
Score = 111 bits (277), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 50/61 (81%), Positives = 56/61 (91%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPP +EGM SLKVDNLTYRT+PD LRRVFE+ G VGD+YIPRDR+T+ESRGFAFV
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 61 R 61
R
Sbjct: 61 R 61
>gi|26345390|dbj|BAC36346.1| unnamed protein product [Mus musculus]
Length = 254
Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 50/61 (81%), Positives = 56/61 (91%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPP +EGM SLKVDNLTYRT+PD LRRVFE+ G VGD+YIPRDR+T+ESRGFAFV
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 61 R 61
R
Sbjct: 61 R 61
>gi|172046472|emb|CAQ34908.1| SR family splicing factor SC35 [Chironomus tentans]
Length = 167
Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/62 (87%), Positives = 57/62 (91%), Gaps = 1/62 (1%)
Query: 1 MSY-GRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAF 59
MSY R PP+IEGM+SLKVDNLTYRTTP+DLRRVFERCG VGDIYIPRDR TRESRGFAF
Sbjct: 1 MSYSARGPPKIEGMISLKVDNLTYRTTPEDLRRVFERCGSVGDIYIPRDRHTRESRGFAF 60
Query: 60 VR 61
VR
Sbjct: 61 VR 62
>gi|326930671|ref|XP_003211466.1| PREDICTED: hypothetical protein LOC100548975 [Meleagris
gallopavo]
Length = 239
Score = 108 bits (271), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 50/61 (81%), Positives = 56/61 (91%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPP +EGM SLKVDNLTYRT+PD LRRVFE+ G VGD+YIPRDR+T+ESRGFAFV
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 61 R 61
R
Sbjct: 61 R 61
>gi|358009411|pdb|2LEA|A Chain A, Solution Structure Of Human Srsf2 (Sc35) Rrm
gi|358009412|pdb|2LEB|A Chain A, Solution Structure Of Human Srsf2 (Sc35) Rrm In Complex
With 5'- Uccagu-3'
gi|358009414|pdb|2LEC|A Chain A, Solution Structure Of Human Srsf2 (Sc35) Rrm In Complex
With 5'- Uggagu-3'
Length = 135
Score = 108 bits (270), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 50/61 (81%), Positives = 56/61 (91%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPP +EGM SLKVDNLTYRT+PD LRRVFE+ G VGD+YIPRDR+T+ESRGFAFV
Sbjct: 35 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 94
Query: 61 R 61
R
Sbjct: 95 R 95
>gi|444727801|gb|ELW68279.1| Serine/arginine-rich splicing factor 2 [Tupaia chinensis]
Length = 218
Score = 108 bits (270), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 50/61 (81%), Positives = 56/61 (91%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPP +EGM SLKVDNLTYRT+PD LRRVFE+ G VGD+YIPRDR+T+ESRGFAFV
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 61 R 61
R
Sbjct: 61 R 61
>gi|62898065|dbj|BAD96972.1| splicing factor, arginine/serine-rich 2 variant [Homo sapiens]
Length = 221
Score = 108 bits (270), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 50/61 (81%), Positives = 56/61 (91%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPP +EGM SLKVDNLTYRT+PD LRRVFE+ G VGD+YIPRDR+T+ESRGFAFV
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 61 R 61
R
Sbjct: 61 R 61
>gi|148702654|gb|EDL34601.1| splicing factor, arginine/serine-rich 2 (SC-35), isoform CRA_a
[Mus musculus]
Length = 241
Score = 108 bits (270), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 50/61 (81%), Positives = 56/61 (91%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPP +EGM SLKVDNLTYRT+PD LRRVFE+ G VGD+YIPRDR+T+ESRGFAFV
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 61 R 61
R
Sbjct: 61 R 61
>gi|397494985|ref|XP_003818346.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 3 [Pan
paniscus]
gi|119609854|gb|EAW89448.1| splicing factor, arginine/serine-rich 2, isoform CRA_g [Homo
sapiens]
gi|194387574|dbj|BAG60151.1| unnamed protein product [Homo sapiens]
Length = 209
Score = 108 bits (269), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 50/61 (81%), Positives = 56/61 (91%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPP +EGM SLKVDNLTYRT+PD LRRVFE+ G VGD+YIPRDR+T+ESRGFAFV
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 61 R 61
R
Sbjct: 61 R 61
>gi|224074970|ref|XP_002194754.1| PREDICTED: serine/arginine-rich splicing factor 2 [Taeniopygia
guttata]
Length = 221
Score = 108 bits (269), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 50/61 (81%), Positives = 56/61 (91%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPP +EGM SLKVDNLTYRT+PD LRRVFE+ G VGD+YIPRDR+T+ESRGFAFV
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 61 R 61
R
Sbjct: 61 R 61
>gi|77627748|ref|NP_001029290.1| serine/arginine-rich splicing factor 2 [Pan troglodytes]
gi|60414777|sp|Q5R1W5.3|SRSF2_PANTR RecName: Full=Serine/arginine-rich splicing factor 2; AltName:
Full=Splicing component, 35 kDa; AltName: Full=Splicing
factor SC35; Short=SC-35; AltName: Full=Splicing
factor, arginine/serine-rich 2
gi|56342346|dbj|BAD74033.1| arginine/serine-rich 2 splicing factor [Pan troglodytes verus]
Length = 221
Score = 108 bits (269), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 50/61 (81%), Positives = 56/61 (91%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPP +EGM SLKVDNLTYRT+PD LRRVFE+ G VGD+YIPRDR+T+ESRGFAFV
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 61 R 61
R
Sbjct: 61 R 61
>gi|47604918|ref|NP_001001305.1| serine/arginine-rich splicing factor 2 [Gallus gallus]
gi|266991|sp|P30352.1|SRSF2_CHICK RecName: Full=Serine/arginine-rich splicing factor 2; AltName:
Full=Protein PR264; AltName: Full=Splicing component,
35 kDa; AltName: Full=Splicing factor SC35;
Short=SC-35; AltName: Full=Splicing factor,
arginine/serine-rich 2
gi|63752|emb|CAA44306.1| PR 264 [Gallus gallus]
gi|228503|prf||1805195A RNA-binding protein PR264
Length = 221
Score = 108 bits (269), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 50/61 (81%), Positives = 56/61 (91%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPP +EGM SLKVDNLTYRT+PD LRRVFE+ G VGD+YIPRDR+T+ESRGFAFV
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 61 R 61
R
Sbjct: 61 R 61
>gi|387018630|gb|AFJ51433.1| Serine/arginine-rich splicing factor 2 [Crotalus adamanteus]
Length = 221
Score = 108 bits (269), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 50/61 (81%), Positives = 56/61 (91%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPP +EGM SLKVDNLTYRT+PD LRRVFE+ G VGD+YIPRDR+T+ESRGFAFV
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 61 R 61
R
Sbjct: 61 R 61
>gi|193784791|dbj|BAG53944.1| unnamed protein product [Homo sapiens]
Length = 195
Score = 108 bits (269), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 50/61 (81%), Positives = 56/61 (91%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPP +EGM SLKVDNLTYRT+PD LRRVFE+ G VGD+YIPRDR+T+ESRGFAFV
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 61 R 61
R
Sbjct: 61 R 61
>gi|116175283|ref|NP_001070697.1| serine/arginine-rich splicing factor 2 [Sus scrofa]
gi|122131841|sp|Q06A98.1|SRSF2_PIG RecName: Full=Serine/arginine-rich splicing factor 2; AltName:
Full=Splicing component, 35 kDa; AltName: Full=Splicing
factor SC35; Short=SC-35; AltName: Full=Splicing
factor, arginine/serine-rich 2
gi|115371755|gb|ABI96202.1| SFRS2 [Sus scrofa]
Length = 221
Score = 107 bits (268), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 50/61 (81%), Positives = 56/61 (91%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPP +EGM SLKVDNLTYRT+PD LRRVFE+ G VGD+YIPRDR+T+ESRGFAFV
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 61 R 61
R
Sbjct: 61 R 61
>gi|359320233|ref|XP_003639286.1| PREDICTED: serine/arginine-rich splicing factor 2-like isoform 1
[Canis lupus familiaris]
gi|359320235|ref|XP_003639287.1| PREDICTED: serine/arginine-rich splicing factor 2-like isoform 2
[Canis lupus familiaris]
Length = 221
Score = 107 bits (268), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 50/61 (81%), Positives = 56/61 (91%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPP +EGM SLKVDNLTYRT+PD LRRVFE+ G VGD+YIPRDR+T+ESRGFAFV
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 61 R 61
R
Sbjct: 61 R 61
>gi|149478364|ref|XP_001514814.1| PREDICTED: serine/arginine-rich splicing factor 2-like, partial
[Ornithorhynchus anatinus]
Length = 120
Score = 107 bits (268), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 50/61 (81%), Positives = 56/61 (91%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPP +EGM SLKVDNLTYRT+PD LRRVFE+ G VGD+YIPRDR+T+ESRGFAFV
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 61 R 61
R
Sbjct: 61 R 61
>gi|1405747|emb|CAA67134.1| PR264/SC35 [Mus musculus]
Length = 121
Score = 107 bits (268), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 50/61 (81%), Positives = 56/61 (91%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPP +EGM SLKVDNLTYRT+PD LRRVFE+ G VGD+YIPRDR+T+ESRGFAFV
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 61 R 61
R
Sbjct: 61 R 61
>gi|426346598|ref|XP_004040963.1| PREDICTED: serine/arginine-rich splicing factor 2 [Gorilla
gorilla gorilla]
Length = 206
Score = 107 bits (268), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 50/61 (81%), Positives = 56/61 (91%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPP +EGM SLKVDNLTYRT+PD LRRVFE+ G VGD+YIPRDR+T+ESRGFAFV
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 61 R 61
R
Sbjct: 61 R 61
>gi|332260181|ref|XP_003279164.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 2 [Nomascus leucogenys]
Length = 221
Score = 107 bits (268), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 50/61 (81%), Positives = 56/61 (91%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPP +EGM SLKVDNLTYRT+PD LRRVFE+ G VGD+YIPRDR+T+ESRGFAFV
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 61 R 61
R
Sbjct: 61 R 61
>gi|6755478|ref|NP_035488.1| serine/arginine-rich splicing factor 2 [Mus musculus]
gi|47271443|ref|NP_003007.2| serine/arginine-rich splicing factor 2 [Homo sapiens]
gi|57528425|ref|NP_001009720.1| serine/arginine-rich splicing factor 2 [Rattus norvegicus]
gi|77735589|ref|NP_001029490.1| serine/arginine-rich splicing factor 2 [Bos taurus]
gi|299758481|ref|NP_001177668.1| splicing factor, arginine/serine-rich 2 [Macaca mulatta]
gi|306482646|ref|NP_001182356.1| serine/arginine-rich splicing factor 2 [Homo sapiens]
gi|126308709|ref|XP_001371367.1| PREDICTED: serine/arginine-rich splicing factor 2-like
[Monodelphis domestica]
gi|296203283|ref|XP_002748811.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 1
[Callithrix jacchus]
gi|395825870|ref|XP_003786143.1| PREDICTED: serine/arginine-rich splicing factor 2 [Otolemur
garnettii]
gi|397494981|ref|XP_003818344.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 1 [Pan
paniscus]
gi|397494983|ref|XP_003818345.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 2 [Pan
paniscus]
gi|402901195|ref|XP_003913541.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 1
[Papio anubis]
gi|402901197|ref|XP_003913542.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 2
[Papio anubis]
gi|402901199|ref|XP_003913543.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 3
[Papio anubis]
gi|402901201|ref|XP_003913544.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 4
[Papio anubis]
gi|18280933|sp|Q62093.4|SRSF2_MOUSE RecName: Full=Serine/arginine-rich splicing factor 2; AltName:
Full=Protein PR264; AltName: Full=Putative myelin
regulatory factor 1; Short=MRF-1; AltName:
Full=Splicing component, 35 kDa; AltName: Full=Splicing
factor SC35; Short=SC-35; AltName: Full=Splicing
factor, arginine/serine-rich 2
gi|52783335|sp|Q6PDU1.3|SRSF2_RAT RecName: Full=Serine/arginine-rich splicing factor 2; AltName:
Full=Splicing component, 35 kDa; AltName: Full=Splicing
factor SC35; Short=SC-35; AltName: Full=Splicing
factor, arginine/serine-rich 2
gi|60416437|sp|Q01130.4|SRSF2_HUMAN RecName: Full=Serine/arginine-rich splicing factor 2; AltName:
Full=Protein PR264; AltName: Full=Splicing component,
35 kDa; AltName: Full=Splicing factor SC35;
Short=SC-35; AltName: Full=Splicing factor,
arginine/serine-rich 2
gi|110287957|sp|Q3MHR5.3|SRSF2_BOVIN RecName: Full=Serine/arginine-rich splicing factor 2; AltName:
Full=Splicing component, 35 kDa; AltName: Full=Splicing
factor SC35; Short=SC-35; AltName: Full=Splicing
factor, arginine/serine-rich 2
gi|539663|pir||A42701 splicing factor SFRS2 - human
gi|35597|emb|CAA44307.1| PR 264 [Homo sapiens]
gi|455419|emb|CAA53383.1| PR264/SC35 [Homo sapiens]
gi|3335676|gb|AAC71000.1| splicing factor SC35 [Mus musculus]
gi|12653143|gb|AAH00339.1| SFRS2 protein [Homo sapiens]
gi|12654915|gb|AAH01303.1| SFRS2 protein [Homo sapiens]
gi|13529557|gb|AAH05493.1| Sfrs2 protein [Mus musculus]
gi|26351947|dbj|BAC39610.1| unnamed protein product [Mus musculus]
gi|26352962|dbj|BAC40111.1| unnamed protein product [Mus musculus]
gi|30583339|gb|AAP35914.1| splicing factor, arginine/serine-rich 2 [Homo sapiens]
gi|34849641|gb|AAH58508.1| Splicing factor, arginine/serine-rich 2 [Rattus norvegicus]
gi|47123339|gb|AAH70086.1| Splicing factor, arginine/serine-rich 2 [Homo sapiens]
gi|61359244|gb|AAX41688.1| splicing factor arginine/serine-rich 2 [synthetic construct]
gi|67969334|dbj|BAE01019.1| unnamed protein product [Macaca fascicularis]
gi|74227066|dbj|BAE38330.1| unnamed protein product [Mus musculus]
gi|75775273|gb|AAI05139.1| Splicing factor, arginine/serine-rich 2 [Bos taurus]
gi|90076288|dbj|BAE87824.1| unnamed protein product [Macaca fascicularis]
gi|119609845|gb|EAW89439.1| splicing factor, arginine/serine-rich 2, isoform CRA_a [Homo
sapiens]
gi|119609846|gb|EAW89440.1| splicing factor, arginine/serine-rich 2, isoform CRA_a [Homo
sapiens]
gi|119609851|gb|EAW89445.1| splicing factor, arginine/serine-rich 2, isoform CRA_a [Homo
sapiens]
gi|119609853|gb|EAW89447.1| splicing factor, arginine/serine-rich 2, isoform CRA_a [Homo
sapiens]
gi|123980614|gb|ABM82136.1| splicing factor, arginine/serine-rich 2 [synthetic construct]
gi|123995435|gb|ABM85319.1| splicing factor, arginine/serine-rich 2 [synthetic construct]
gi|148702655|gb|EDL34602.1| splicing factor, arginine/serine-rich 2 (SC-35), isoform CRA_b
[Mus musculus]
gi|148702656|gb|EDL34603.1| splicing factor, arginine/serine-rich 2 (SC-35), isoform CRA_b
[Mus musculus]
gi|149054884|gb|EDM06701.1| similar to splicing factor, arginine/serine-rich 2, isoform CRA_a
[Rattus norvegicus]
gi|149054885|gb|EDM06702.1| similar to splicing factor, arginine/serine-rich 2, isoform CRA_a
[Rattus norvegicus]
gi|149054887|gb|EDM06704.1| similar to splicing factor, arginine/serine-rich 2, isoform CRA_a
[Rattus norvegicus]
gi|168277776|dbj|BAG10866.1| splicing factor, arginine/serine-rich 2 [synthetic construct]
gi|193784944|dbj|BAG54097.1| unnamed protein product [Homo sapiens]
gi|296476083|tpg|DAA18198.1| TPA: splicing factor, arginine/serine-rich 2 [Bos taurus]
gi|380782971|gb|AFE63361.1| serine/arginine-rich splicing factor 2 [Macaca mulatta]
gi|380815556|gb|AFE79652.1| serine/arginine-rich splicing factor 2 [Macaca mulatta]
gi|384941848|gb|AFI34529.1| serine/arginine-rich splicing factor 2 [Macaca mulatta]
gi|384948766|gb|AFI37988.1| serine/arginine-rich splicing factor 2 [Macaca mulatta]
gi|410226692|gb|JAA10565.1| serine/arginine-rich splicing factor 2 [Pan troglodytes]
gi|410226694|gb|JAA10566.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
gi|410262826|gb|JAA19379.1| serine/arginine-rich splicing factor 2 [Pan troglodytes]
gi|410262828|gb|JAA19380.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
gi|410299756|gb|JAA28478.1| serine/arginine-rich splicing factor 2 [Pan troglodytes]
gi|410299760|gb|JAA28480.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
gi|410299766|gb|JAA28483.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
gi|410338225|gb|JAA38059.1| serine/arginine-rich splicing factor 2 [Pan troglodytes]
gi|410338227|gb|JAA38060.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
gi|410338229|gb|JAA38061.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
gi|410338231|gb|JAA38062.1| serine/arginine-rich splicing factor 2 [Pan troglodytes]
gi|410338233|gb|JAA38063.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
gi|228504|prf||1805195B RNA-binding protein PR264
Length = 221
Score = 107 bits (268), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 50/61 (81%), Positives = 56/61 (91%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPP +EGM SLKVDNLTYRT+PD LRRVFE+ G VGD+YIPRDR+T+ESRGFAFV
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 61 R 61
R
Sbjct: 61 R 61
>gi|301765996|ref|XP_002918431.1| PREDICTED: hypothetical protein LOC100477809 [Ailuropoda
melanoleuca]
Length = 182
Score = 107 bits (268), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 50/61 (81%), Positives = 56/61 (91%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPP +EGM SLKVDNLTYRT+PD LRRVFE+ G VGD+YIPRDR+T+ESRGFAFV
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 61 R 61
R
Sbjct: 61 R 61
>gi|281342789|gb|EFB18373.1| hypothetical protein PANDA_006871 [Ailuropoda melanoleuca]
Length = 173
Score = 107 bits (268), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 50/61 (81%), Positives = 56/61 (91%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPP +EGM SLKVDNLTYRT+PD LRRVFE+ G VGD+YIPRDR+T+ESRGFAFV
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 61 R 61
R
Sbjct: 61 R 61
>gi|440895154|gb|ELR47416.1| Serine/arginine-rich splicing factor 2, partial [Bos grunniens
mutus]
Length = 86
Score = 107 bits (268), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 50/61 (81%), Positives = 56/61 (91%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPP +EGM SLKVDNLTYRT+PD LRRVFE+ G VGD+YIPRDR+T+ESRGFAFV
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 61 R 61
R
Sbjct: 61 R 61
>gi|355568958|gb|EHH25239.1| hypothetical protein EGK_09022 [Macaca mulatta]
Length = 222
Score = 107 bits (267), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 50/61 (81%), Positives = 56/61 (91%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPP +EGM SLKVDNLTYRT+PD LRRVFE+ G VGD+YIPRDR+T+ESRGFAFV
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 61 R 61
R
Sbjct: 61 R 61
>gi|449283101|gb|EMC89804.1| Splicing factor, arginine/serine-rich 2 [Columba livia]
Length = 182
Score = 107 bits (267), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 50/61 (81%), Positives = 56/61 (91%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPP +EGM SLKVDNLTYRT+PD LRRVFE+ G VGD+YIPRDR+T+ESRGFAFV
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 61 R 61
R
Sbjct: 61 R 61
>gi|426346592|ref|XP_004040960.1| PREDICTED: serine/arginine-rich splicing factor 2 [Gorilla
gorilla gorilla]
Length = 241
Score = 107 bits (267), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 50/61 (81%), Positives = 56/61 (91%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPP +EGM SLKVDNLTYRT+PD LRRVFE+ G VGD+YIPRDR+T+ESRGFAFV
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 61 R 61
R
Sbjct: 61 R 61
>gi|21752539|dbj|BAC04206.1| unnamed protein product [Homo sapiens]
gi|119609852|gb|EAW89446.1| splicing factor, arginine/serine-rich 2, isoform CRA_f [Homo
sapiens]
Length = 186
Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 50/61 (81%), Positives = 56/61 (91%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPP +EGM SLKVDNLTYRT+PD LRRVFE+ G VGD+YIPRDR+T+ESRGFAFV
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 61 R 61
R
Sbjct: 61 R 61
>gi|426346594|ref|XP_004040961.1| PREDICTED: serine/arginine-rich splicing factor 2 [Gorilla
gorilla gorilla]
Length = 219
Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 50/61 (81%), Positives = 56/61 (91%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPP +EGM SLKVDNLTYRT+PD LRRVFE+ G VGD+YIPRDR+T+ESRGFAFV
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 61 R 61
R
Sbjct: 61 R 61
>gi|426346596|ref|XP_004040962.1| PREDICTED: serine/arginine-rich splicing factor 2 [Gorilla
gorilla gorilla]
Length = 221
Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 50/61 (81%), Positives = 56/61 (91%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPP +EGM SLKVDNLTYRT+PD LRRVFE+ G VGD+YIPRDR+T+ESRGFAFV
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 61 R 61
R
Sbjct: 61 R 61
>gi|90076648|dbj|BAE88004.1| unnamed protein product [Macaca fascicularis]
Length = 210
Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 50/61 (81%), Positives = 56/61 (91%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPP +EGM SLKVDNLTYRT+PD LRRVFE+ G VGD+YIPRDR+T+ESRGFAFV
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 61 R 61
R
Sbjct: 61 R 61
>gi|193787706|dbj|BAG53419.1| unnamed protein product [Homo sapiens]
Length = 199
Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 50/61 (81%), Positives = 56/61 (91%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPP +EGM SLKVDNLTYRT+PD LRRVFE+ G VGD+YIPRDR+T+ESRGFAFV
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 61 R 61
R
Sbjct: 61 R 61
>gi|21751099|dbj|BAC03903.1| unnamed protein product [Homo sapiens]
Length = 201
Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 50/61 (81%), Positives = 56/61 (91%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPP +EGM SLKVDNLTYRT+PD LRRVFE+ G VGD+YIPRDR+T+ESRGFAFV
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 61 R 61
R
Sbjct: 61 R 61
>gi|44890463|gb|AAH66958.1| SFRS2 protein [Homo sapiens]
Length = 179
Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 50/61 (81%), Positives = 56/61 (91%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPP +EGM SLKVDNLTYRT+PD LRRVFE+ G VGD+YIPRDR+T+ESRGFAFV
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 61 R 61
R
Sbjct: 61 R 61
>gi|355718912|gb|AES06428.1| splicing factor, arginine/serine-rich 2 [Mustela putorius furo]
Length = 108
Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 50/61 (81%), Positives = 56/61 (91%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPP +EGM SLKVDNLTYRT+PD LRRVFE+ G VGD+YIPRDR+T+ESRGFAFV
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 61 R 61
R
Sbjct: 61 R 61
>gi|327264866|ref|XP_003217232.1| PREDICTED: serine/arginine-rich splicing factor 2-like [Anolis
carolinensis]
Length = 221
Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 50/61 (81%), Positives = 56/61 (91%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPP +EGM SLKVDNLTYRT+PD LRRVFE+ G VGD+YIPRDR+T+ESRGFAFV
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 61 R 61
R
Sbjct: 61 R 61
>gi|403280479|ref|XP_003931745.1| PREDICTED: uncharacterized protein LOC101052045 [Saimiri
boliviensis boliviensis]
Length = 209
Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 50/61 (81%), Positives = 56/61 (91%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPP +EGM SLKVDNLTYRT+PD LRRVFE+ G VGD+YIPRDR+T+ESRGFAFV
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 61 R 61
R
Sbjct: 61 R 61
>gi|297701877|ref|XP_002827924.1| PREDICTED: uncharacterized protein LOC100439801 isoform 2 [Pongo
abelii]
Length = 287
Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 50/61 (81%), Positives = 56/61 (91%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPP +EGM SLKVDNLTYRT+PD LRRVFE+ G VGD+YIPRDR+T+ESRGFAFV
Sbjct: 67 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 126
Query: 61 R 61
R
Sbjct: 127 R 127
>gi|119609850|gb|EAW89444.1| splicing factor, arginine/serine-rich 2, isoform CRA_e [Homo
sapiens]
Length = 78
Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 50/61 (81%), Positives = 56/61 (91%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPP +EGM SLKVDNLTYRT+PD LRRVFE+ G VGD+YIPRDR+T+ESRGFAFV
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 61 R 61
R
Sbjct: 61 R 61
>gi|432113367|gb|ELK35779.1| Serine/arginine-rich splicing factor 2 [Myotis davidii]
Length = 218
Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 50/61 (81%), Positives = 56/61 (91%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPP +EGM SLKVDNLTYRT+PD LRRVFE+ G VGD+YIPRDR+T+ESRGFAFV
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 61 R 61
R
Sbjct: 61 R 61
>gi|291224278|ref|XP_002732132.1| PREDICTED: splicing factor, arginine/serine-rich 2-like
[Saccoglossus kowalevskii]
Length = 230
Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/61 (83%), Positives = 55/61 (90%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSY R PP IEGM SLKVDNLTYRTTP+DLRR FE+ G+VGD+YIPRDRFTRESRGFAFV
Sbjct: 1 MSYSRGPPEIEGMHSLKVDNLTYRTTPEDLRRCFEKYGDVGDVYIPRDRFTRESRGFAFV 60
Query: 61 R 61
R
Sbjct: 61 R 61
>gi|193785174|dbj|BAG54327.1| unnamed protein product [Homo sapiens]
Length = 122
Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 50/61 (81%), Positives = 56/61 (91%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPP +EGM SLKVDNLTYRT+PD LRRVFE+ G VGD+YIPRDR+T+ESRGFAFV
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 61 R 61
R
Sbjct: 61 R 61
>gi|47087067|ref|NP_998547.1| splicing factor, arginine/serine-rich 2 [Danio rerio]
gi|28279759|gb|AAH46045.1| Splicing factor, arginine/serine-rich 2 [Danio rerio]
Length = 225
Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 49/61 (80%), Positives = 56/61 (91%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPP +EGM SLKVDNLTYRT+P+ LRRVFE+ G VGD+YIPRDR+T+ESRGFAFV
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 61 R 61
R
Sbjct: 61 R 61
>gi|410925942|ref|XP_003976438.1| PREDICTED: uncharacterized protein LOC101074667 [Takifugu
rubripes]
Length = 225
Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 49/61 (80%), Positives = 56/61 (91%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
M+YGRPPP +EGMVSLKVDNLTYRT P+ LRRVFE+ G VGD+YIPRDR+T+ESRGFAFV
Sbjct: 1 MNYGRPPPDVEGMVSLKVDNLTYRTAPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 61 R 61
R
Sbjct: 61 R 61
>gi|223647184|gb|ACN10350.1| Splicing factor, arginine/serine-rich 2 [Salmo salar]
gi|223673057|gb|ACN12710.1| Splicing factor, arginine/serine-rich 2 [Salmo salar]
Length = 212
Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 48/61 (78%), Positives = 56/61 (91%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPP +EGM SLKVDNLTYRT+P+ LRRVFE+ G VGD+YIPRDR+T+ESRGF+FV
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFSFV 60
Query: 61 R 61
R
Sbjct: 61 R 61
>gi|221219380|gb|ACM08351.1| Splicing factor, arginine/serine-rich 2 [Salmo salar]
gi|223647188|gb|ACN10352.1| Splicing factor, arginine/serine-rich 2 [Salmo salar]
gi|223673061|gb|ACN12712.1| Splicing factor, arginine/serine-rich 2 [Salmo salar]
Length = 212
Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 48/61 (78%), Positives = 56/61 (91%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPP +EGM SLKVDNLTYRT+P+ LRRVFE+ G VGD+YIPRDR+T+ESRGF+FV
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFSFV 60
Query: 61 R 61
R
Sbjct: 61 R 61
>gi|348509946|ref|XP_003442507.1| PREDICTED: serine/arginine-rich splicing factor 2-like
[Oreochromis niloticus]
Length = 218
Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 48/61 (78%), Positives = 56/61 (91%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPP ++GM SLKVDNLTYRT+P+ LRRVFE+ G VGD+YIPRDR+T+ESRGFAFV
Sbjct: 1 MSYGRPPPDVDGMTSLKVDNLTYRTSPEALRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 61 R 61
R
Sbjct: 61 R 61
>gi|41946787|gb|AAH65971.1| Zgc:55876 protein [Danio rerio]
Length = 220
Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 48/61 (78%), Positives = 56/61 (91%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPP ++GM SLKVDNLTYRT+P+ LRRVFE+ G VGD+YIPRDR+T+ESRGFAFV
Sbjct: 1 MSYGRPPPDVDGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 61 R 61
R
Sbjct: 61 R 61
>gi|209736008|gb|ACI68873.1| Splicing factor, arginine/serine-rich 2 [Salmo salar]
Length = 222
Score = 105 bits (263), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 48/61 (78%), Positives = 56/61 (91%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPP +EGM SLKVDNLTYRT+P+ LRRVFE+ G VGD+YIPRDR+T+ESRGF+FV
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFSFV 60
Query: 61 R 61
R
Sbjct: 61 R 61
>gi|41054475|ref|NP_955945.1| serine/arginine-rich splicing factor 2b [Danio rerio]
gi|28278933|gb|AAH45480.1| Zgc:55876 [Danio rerio]
Length = 218
Score = 105 bits (263), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 48/61 (78%), Positives = 56/61 (91%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPP ++GM SLKVDNLTYRT+P+ LRRVFE+ G VGD+YIPRDR+T+ESRGFAFV
Sbjct: 1 MSYGRPPPDVDGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 61 R 61
R
Sbjct: 61 R 61
>gi|348544446|ref|XP_003459692.1| PREDICTED: hypothetical protein LOC100710640 [Oreochromis
niloticus]
Length = 227
Score = 105 bits (263), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 49/61 (80%), Positives = 56/61 (91%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPP +EGM SLKVDNLTYRT+P+ LRRVFE+ G VGD+YIPRDR+T+ESRGFAFV
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 61 R 61
R
Sbjct: 61 R 61
>gi|209155586|gb|ACI34025.1| Splicing factor, arginine/serine-rich 2 [Salmo salar]
gi|209732124|gb|ACI66931.1| Splicing factor, arginine/serine-rich 2 [Salmo salar]
Length = 211
Score = 105 bits (263), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 49/61 (80%), Positives = 56/61 (91%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPP +EGM SLKVDNLTYRT+P+ LRRVFE+ G VGD+YIPRDR+T+ESRGFAFV
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 61 R 61
R
Sbjct: 61 R 61
>gi|148230060|ref|NP_001080743.1| serine/arginine-rich splicing factor 2 [Xenopus laevis]
gi|28175397|gb|AAH45229.1| Sfrs2-prov protein [Xenopus laevis]
Length = 215
Score = 105 bits (263), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 49/61 (80%), Positives = 56/61 (91%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPP +EGM SLKVDNLTYRT+P+ LRRVFE+ G VGD+YIPRDR+T+ESRGFAFV
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 61 R 61
R
Sbjct: 61 R 61
>gi|45361503|ref|NP_989328.1| serine/arginine-rich splicing factor 2 [Xenopus (Silurana)
tropicalis]
gi|39794351|gb|AAH64167.1| splicing factor, arginine/serine-rich 2 [Xenopus (Silurana)
tropicalis]
gi|89272888|emb|CAJ82901.1| splicing factor, arginine/serine-rich 2 [Xenopus (Silurana)
tropicalis]
Length = 220
Score = 105 bits (263), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 49/61 (80%), Positives = 56/61 (91%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPP +EGM SLKVDNLTYRT+P+ LRRVFE+ G VGD+YIPRDR+T+ESRGFAFV
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 61 R 61
R
Sbjct: 61 R 61
>gi|405967042|gb|EKC32256.1| Splicing factor, arginine/serine-rich 2 [Crassostrea gigas]
Length = 183
Score = 105 bits (262), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 50/61 (81%), Positives = 56/61 (91%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGR PP I+GM SLKVDNLTYRTTP+DLRR F++ G+VGD+YIPRDRFTRESRGFAFV
Sbjct: 1 MSYGRGPPEIDGMTSLKVDNLTYRTTPEDLRRAFDKYGDVGDVYIPRDRFTRESRGFAFV 60
Query: 61 R 61
R
Sbjct: 61 R 61
>gi|195147602|ref|XP_002014768.1| GL18771 [Drosophila persimilis]
gi|194106721|gb|EDW28764.1| GL18771 [Drosophila persimilis]
Length = 72
Score = 105 bits (262), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 50/55 (90%), Positives = 53/55 (96%)
Query: 5 RPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAF 59
RPPPRI+GMVSLKVDNLTYRTTP+DLRRVFERCGEVGDIYIPRDR+TRESRG F
Sbjct: 14 RPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGLCF 68
>gi|410929633|ref|XP_003978204.1| PREDICTED: uncharacterized protein LOC101070858 [Takifugu
rubripes]
Length = 229
Score = 105 bits (262), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 49/61 (80%), Positives = 56/61 (91%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPP +EGM SLKVDNLTYRT+P+ LRRVFE+ G VGD+YIPRDR+T+ESRGFAFV
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 61 R 61
R
Sbjct: 61 R 61
>gi|317419577|emb|CBN81614.1| Splicing factor, arginine/serine-rich 2 [Dicentrarchus labrax]
Length = 228
Score = 105 bits (261), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 49/61 (80%), Positives = 56/61 (91%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPP +EGM SLKVDNLTYRT+P+ LRRVFE+ G VGD+YIPRDR+T+ESRGFAFV
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 61 R 61
R
Sbjct: 61 R 61
>gi|432949878|ref|XP_004084303.1| PREDICTED: uncharacterized protein LOC100049528 [Oryzias latipes]
Length = 239
Score = 104 bits (260), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 48/61 (78%), Positives = 56/61 (91%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPP +EGM SLKVDNLTYRT+P+ LRRVFE+ G VGD+YIPRDR+++ESRGFAFV
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYSKESRGFAFV 60
Query: 61 R 61
R
Sbjct: 61 R 61
>gi|427783535|gb|JAA57219.1| Putative splicing factor sr protein superfamily [Rhipicephalus
pulchellus]
Length = 401
Score = 104 bits (259), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 47/61 (77%), Positives = 56/61 (91%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
M+YGR PP+I+GM SLKVDNLTYRTTP+DL+RVFE+ G+VGD+YIPR +TRESRGFAFV
Sbjct: 1 MNYGRAPPQIDGMTSLKVDNLTYRTTPEDLKRVFEKYGDVGDVYIPRHPYTRESRGFAFV 60
Query: 61 R 61
R
Sbjct: 61 R 61
>gi|337926|gb|AAA60306.1| splicing factor [Homo sapiens]
Length = 221
Score = 104 bits (259), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 49/61 (80%), Positives = 55/61 (90%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPP +EGM SLKVDNLTYRT+PD LRRVFE+ VGD+YIPRDR+T+ESRGFAFV
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYRRVGDVYIPRDRYTKESRGFAFV 60
Query: 61 R 61
R
Sbjct: 61 R 61
>gi|427786359|gb|JAA58631.1| Putative splicing factor sr protein superfamily [Rhipicephalus
pulchellus]
Length = 383
Score = 104 bits (259), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 49/61 (80%), Positives = 55/61 (90%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGR PP I+GM SLKVDNLTYRTTP+DL+RVFER G+VGD+YIPR +TRESRGFAFV
Sbjct: 1 MSYGRAPPTIDGMTSLKVDNLTYRTTPEDLKRVFERYGDVGDVYIPRHPYTRESRGFAFV 60
Query: 61 R 61
R
Sbjct: 61 R 61
>gi|343961547|dbj|BAK62363.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
Length = 221
Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/61 (80%), Positives = 54/61 (88%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPP +EGM SLKVDNLTYRT+PD LRRV E+ G VGD YIPRDR+T+ESRGFAFV
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVSEKYGRVGDAYIPRDRYTKESRGFAFV 60
Query: 61 R 61
R
Sbjct: 61 R 61
>gi|427797867|gb|JAA64385.1| Putative splicing factor sr protein superfamily, partial
[Rhipicephalus pulchellus]
Length = 300
Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/61 (80%), Positives = 55/61 (90%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGR PP I+GM SLKVDNLTYRTTP+DL+RVFER G+VGD+YIPR +TRESRGFAFV
Sbjct: 1 MSYGRAPPTIDGMTSLKVDNLTYRTTPEDLKRVFERYGDVGDVYIPRHPYTRESRGFAFV 60
Query: 61 R 61
R
Sbjct: 61 R 61
>gi|115843186|ref|XP_001198082.1| PREDICTED: serine/arginine-rich splicing factor 2-like
[Strongylocentrotus purpuratus]
Length = 141
Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/61 (81%), Positives = 54/61 (88%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGR P IEGM SLKVDNLTY TTP+DLRR FE+ GEVGDIYIPRD+F+RESRGFAFV
Sbjct: 1 MSYGRIAPDIEGMTSLKVDNLTYSTTPEDLRRCFEKYGEVGDIYIPRDKFSRESRGFAFV 60
Query: 61 R 61
R
Sbjct: 61 R 61
>gi|293675|gb|AAA39332.1| IFN-response element binding factor 2, partial [Mus musculus]
Length = 277
Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/58 (81%), Positives = 53/58 (91%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFA 58
MSYGRPPP +EGM SLKVDNLTYRT+PD LRRVFE+ G VGD+YIPRDR+T+ESRGFA
Sbjct: 47 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFA 104
>gi|395533366|ref|XP_003768731.1| PREDICTED: serine/arginine-rich splicing factor 2 [Sarcophilus
harrisii]
Length = 224
Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/64 (79%), Positives = 56/64 (87%), Gaps = 3/64 (4%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFE---RCGEVGDIYIPRDRFTRESRGF 57
MSYGRPPP +EGM SLKVDNLTYRT+PD LRRVFE R G VGD+YIPRDR+T+ESRGF
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKDGRYGRVGDVYIPRDRYTKESRGF 60
Query: 58 AFVR 61
AFVR
Sbjct: 61 AFVR 64
>gi|115843189|ref|XP_001198099.1| PREDICTED: serine/arginine-rich splicing factor 2-like
[Strongylocentrotus purpuratus]
Length = 141
Score = 102 bits (253), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 49/61 (80%), Positives = 53/61 (86%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGR P EGM SLKVDNLTY TTP+DLRR FE+ GEVGDIYIPRD+F+RESRGFAFV
Sbjct: 1 MSYGRIAPDFEGMTSLKVDNLTYSTTPEDLRRCFEKYGEVGDIYIPRDKFSRESRGFAFV 60
Query: 61 R 61
R
Sbjct: 61 R 61
>gi|195472373|ref|XP_002088475.1| GE12283 [Drosophila yakuba]
gi|194174576|gb|EDW88187.1| GE12283 [Drosophila yakuba]
Length = 217
Score = 102 bits (253), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 54/80 (67%), Positives = 57/80 (71%), Gaps = 23/80 (28%)
Query: 5 RPPPRIEGMVSLK-----------------------VDNLTYRTTPDDLRRVFERCGEVG 41
RPPPRI+GMVSLK VDNLTYRTTP+DLRRVFERCGEVG
Sbjct: 14 RPPPRIDGMVSLKASICKRKRDQIAHKMAAGWQRCVVDNLTYRTTPEDLRRVFERCGEVG 73
Query: 42 DIYIPRDRFTRESRGFAFVR 61
DIYIPRDR+TRESRGFAFVR
Sbjct: 74 DIYIPRDRYTRESRGFAFVR 93
>gi|241020201|ref|XP_002405861.1| IFN-response element binding factor, putative [Ixodes scapularis]
gi|215491811|gb|EEC01452.1| IFN-response element binding factor, putative [Ixodes scapularis]
Length = 194
Score = 101 bits (251), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 47/61 (77%), Positives = 55/61 (90%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGR PP I+GM SLKVDNLTYRTTP+DL+RVFE+ G+VGD+YIPR +TR+SRGFAFV
Sbjct: 1 MSYGRGPPTIDGMTSLKVDNLTYRTTPEDLKRVFEKYGDVGDVYIPRHPYTRDSRGFAFV 60
Query: 61 R 61
R
Sbjct: 61 R 61
>gi|443696471|gb|ELT97165.1| hypothetical protein CAPTEDRAFT_18729 [Capitella teleta]
Length = 160
Score = 101 bits (251), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 47/61 (77%), Positives = 53/61 (86%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MS+ R PP IEGM SLKVDNLTYRTT +DLRR FE+ G+VGD+YIPRDRF+ ESRGFAFV
Sbjct: 1 MSHSRTPPNIEGMASLKVDNLTYRTTTEDLRRAFEKYGDVGDVYIPRDRFSHESRGFAFV 60
Query: 61 R 61
R
Sbjct: 61 R 61
>gi|321458047|gb|EFX69122.1| hypothetical protein DAPPUDRAFT_62581 [Daphnia pulex]
Length = 109
Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/58 (82%), Positives = 54/58 (93%)
Query: 4 GRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
GR PPRIEGM SLKVDNLTYRTT +DLRRVFE+ G+VGD+YIP+DRF+RESRGFAFVR
Sbjct: 3 GRGPPRIEGMTSLKVDNLTYRTTCEDLRRVFEKYGDVGDVYIPKDRFSRESRGFAFVR 60
>gi|226481931|emb|CAX79231.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
Length = 163
Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 50/59 (84%), Positives = 52/59 (88%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
YGR PPRI+GMVSLKVDNL YRTT DDLRRVF R GEVGDIYIPRD +T ESRGFAFVR
Sbjct: 4 YGRSPPRIDGMVSLKVDNLAYRTTIDDLRRVFSRFGEVGDIYIPRDPYTFESRGFAFVR 62
>gi|256092428|ref|XP_002581939.1| serine/arginine rich splicing factor [Schistosoma mansoni]
gi|226481905|emb|CAX79218.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|353230937|emb|CCD77354.1| putative serine/arginine rich splicing factor [Schistosoma
mansoni]
Length = 102
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 50/59 (84%), Positives = 52/59 (88%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
YGR PPRI+GMVSLKVDNL YRTT DDLRRVF R GEVGDIYIPRD +T ESRGFAFVR
Sbjct: 4 YGRSPPRIDGMVSLKVDNLAYRTTIDDLRRVFSRFGEVGDIYIPRDPYTFESRGFAFVR 62
>gi|226476676|emb|CAX72230.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
Length = 151
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 50/59 (84%), Positives = 52/59 (88%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
YGR PPRI+GMVSLKVDNL YRTT DDLRRVF R GEVGDIYIPRD +T ESRGFAFVR
Sbjct: 4 YGRSPPRIDGMVSLKVDNLAYRTTIDDLRRVFSRFGEVGDIYIPRDPYTFESRGFAFVR 62
>gi|256092430|ref|XP_002581940.1| serine/arginine rich splicing factor [Schistosoma mansoni]
gi|353230938|emb|CCD77355.1| putative serine/arginine rich splicing factor [Schistosoma
mansoni]
Length = 151
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 50/59 (84%), Positives = 52/59 (88%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
YGR PPRI+GMVSLKVDNL YRTT DDLRRVF R GEVGDIYIPRD +T ESRGFAFVR
Sbjct: 4 YGRSPPRIDGMVSLKVDNLAYRTTIDDLRRVFSRFGEVGDIYIPRDPYTFESRGFAFVR 62
>gi|226476662|emb|CAX72223.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
Length = 151
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 50/59 (84%), Positives = 52/59 (88%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
YGR PPRI+GMVSLKVDNL YRTT DDLRRVF R GEVGDIYIPRD +T ESRGFAFVR
Sbjct: 4 YGRSPPRIDGMVSLKVDNLAYRTTIDDLRRVFSRFGEVGDIYIPRDPYTFESRGFAFVR 62
>gi|3892187|gb|AAC78303.1| RNA-binding protein [Schistosoma japonicum]
gi|226476664|emb|CAX72224.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226476666|emb|CAX72225.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226476668|emb|CAX72226.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226476670|emb|CAX72227.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226476672|emb|CAX72228.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226476674|emb|CAX72229.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481907|emb|CAX79219.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481909|emb|CAX79220.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481911|emb|CAX79221.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481913|emb|CAX79222.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481915|emb|CAX79223.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481917|emb|CAX79224.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481919|emb|CAX79225.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481923|emb|CAX79227.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481925|emb|CAX79228.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481927|emb|CAX79229.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481929|emb|CAX79230.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481933|emb|CAX79232.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481935|emb|CAX79233.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481937|emb|CAX79234.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481939|emb|CAX79235.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481941|emb|CAX79236.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481943|emb|CAX79237.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481945|emb|CAX79238.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481947|emb|CAX79239.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481949|emb|CAX79240.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481951|emb|CAX79241.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481953|emb|CAX79242.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481955|emb|CAX79243.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481957|emb|CAX79244.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481959|emb|CAX79245.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481961|emb|CAX79246.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
Length = 151
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 50/59 (84%), Positives = 52/59 (88%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
YGR PPRI+GMVSLKVDNL YRTT DDLRRVF R GEVGDIYIPRD +T ESRGFAFVR
Sbjct: 4 YGRSPPRIDGMVSLKVDNLAYRTTIDDLRRVFSRFGEVGDIYIPRDPYTFESRGFAFVR 62
>gi|256092432|ref|XP_002581941.1| serine/arginine rich splicing factor [Schistosoma mansoni]
gi|353230939|emb|CCD77356.1| putative serine/arginine rich splicing factor [Schistosoma
mansoni]
Length = 102
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 50/59 (84%), Positives = 52/59 (88%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
YGR PPRI+GMVSLKVDNL YRTT DDLRRVF R GEVGDIYIPRD +T ESRGFAFVR
Sbjct: 4 YGRSPPRIDGMVSLKVDNLAYRTTIDDLRRVFSRFGEVGDIYIPRDPYTFESRGFAFVR 62
>gi|358331785|dbj|GAA50546.1| serine/arginine-rich splicing factor 2 [Clonorchis sinensis]
Length = 340
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/59 (79%), Positives = 51/59 (86%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
Y + PPRIEGMVSLKVDNL YRTT +DLRRVF R GEVGD+YIPRD +T ESRGFAFVR
Sbjct: 4 YAKSPPRIEGMVSLKVDNLAYRTTIEDLRRVFSRYGEVGDVYIPRDPYTFESRGFAFVR 62
>gi|226481921|emb|CAX79226.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
Length = 151
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/59 (84%), Positives = 51/59 (86%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
YGR PPRI+GMVSLKVDNL YRTT DDLRRVF R GEVGDIYIPRD T ESRGFAFVR
Sbjct: 4 YGRSPPRIDGMVSLKVDNLAYRTTIDDLRRVFSRFGEVGDIYIPRDPCTFESRGFAFVR 62
>gi|403308741|ref|XP_003944810.1| PREDICTED: uncharacterized protein LOC101031882, partial [Saimiri
boliviensis boliviensis]
Length = 346
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 43/61 (70%), Positives = 52/61 (85%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MS GRPPP ++GM++LKVDNLTYRT+PD LRRVFE+ G VGD+YIPR+ T+ RGFAFV
Sbjct: 107 MSCGRPPPDVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFV 166
Query: 61 R 61
R
Sbjct: 167 R 167
>gi|397516519|ref|XP_003828475.1| PREDICTED: uncharacterized protein LOC100992382 [Pan paniscus]
Length = 384
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 43/61 (70%), Positives = 52/61 (85%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MS GRPPP ++GM++LKVDNLTYRT+PD LRRVFE+ G VGD+YIPR+ T+ RGFAFV
Sbjct: 147 MSCGRPPPDVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFV 206
Query: 61 R 61
R
Sbjct: 207 R 207
>gi|198415726|ref|XP_002129926.1| PREDICTED: similar to splicing factor, arginine/serine-rich 2
(SC-35) [Ciona intestinalis]
Length = 178
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 43/58 (74%), Positives = 53/58 (91%)
Query: 4 GRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
GRPPP ++ MVSLKVDNLTYRT+P+ L+R FE+ G+VGD+YIPRDR++RESRGFAFVR
Sbjct: 5 GRPPPGLDNMVSLKVDNLTYRTSPETLKRSFEKYGDVGDVYIPRDRYSRESRGFAFVR 62
>gi|296216761|ref|XP_002754708.1| PREDICTED: serine/arginine-rich splicing factor 8-like
[Callithrix jacchus]
Length = 295
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 43/61 (70%), Positives = 52/61 (85%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MS GRPPP ++GM++LKVDNLTYRT+PD LRRVFE+ G VGD+YIPR+ T+ RGFAFV
Sbjct: 1 MSCGRPPPDVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFV 60
Query: 61 R 61
R
Sbjct: 61 R 61
>gi|380791457|gb|AFE67604.1| serine/arginine-rich splicing factor 8, partial [Macaca mulatta]
Length = 86
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 43/61 (70%), Positives = 52/61 (85%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MS GRPPP ++GM++LKVDNLTYRT+PD LRRVFE+ G VGD+YIPR+ T+ RGFAFV
Sbjct: 1 MSCGRPPPDVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREHHTKAPRGFAFV 60
Query: 61 R 61
R
Sbjct: 61 R 61
>gi|255090217|gb|ACU00434.1| RNA binding protein [Schistosoma japonicum]
Length = 70
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/58 (82%), Positives = 50/58 (86%)
Query: 4 GRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
GR PPRI GMVSLKVDNL Y+TT DDLRRVF R GEVGDIYIPRD +T ESRGFAFVR
Sbjct: 1 GRSPPRIYGMVSLKVDNLVYKTTIDDLRRVFSRFGEVGDIYIPRDPYTFESRGFAFVR 58
>gi|388490247|ref|NP_001253264.1| serine/arginine-rich splicing factor 8 [Macaca mulatta]
gi|402894987|ref|XP_003910620.1| PREDICTED: serine/arginine-rich splicing factor 8 [Papio anubis]
gi|387542734|gb|AFJ71994.1| serine/arginine-rich splicing factor 8 [Macaca mulatta]
Length = 287
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/61 (70%), Positives = 52/61 (85%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MS GRPPP ++GM++LKVDNLTYRT+PD LRRVFE+ G VGD+YIPR+ T+ RGFAFV
Sbjct: 1 MSCGRPPPDVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFV 60
Query: 61 R 61
R
Sbjct: 61 R 61
>gi|389609107|dbj|BAM18165.1| serine/arginine rich splicing factor [Papilio xuthus]
Length = 151
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/49 (91%), Positives = 48/49 (97%)
Query: 13 MVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
MVSLKVDNLTYRTT +DLRRVFERCG+VGDIYIPRDR+TRESRGFAFVR
Sbjct: 1 MVSLKVDNLTYRTTAEDLRRVFERCGDVGDIYIPRDRYTRESRGFAFVR 49
>gi|380809044|gb|AFE76397.1| serine/arginine-rich splicing factor 8 [Macaca mulatta]
gi|384944954|gb|AFI36082.1| serine/arginine-rich splicing factor 8 [Macaca mulatta]
Length = 287
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/61 (70%), Positives = 52/61 (85%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MS GRPPP ++GM++LKVDNLTYRT+PD LRRVFE+ G VGD+YIPR+ T+ RGFAFV
Sbjct: 1 MSCGRPPPDVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFV 60
Query: 61 R 61
R
Sbjct: 61 R 61
>gi|307219198|ref|NP_001182520.1| splicing factor, arginine/serine-rich 2B [Pongo abelii]
Length = 282
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/61 (70%), Positives = 52/61 (85%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MS GRPPP ++GM++LKVDNLTYRT+PD LRRVFE+ G VGD+YIPR+ T+ RGFAFV
Sbjct: 1 MSCGRPPPDVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFV 60
Query: 61 R 61
R
Sbjct: 61 R 61
>gi|303324701|pdb|2KN4|A Chain A, The Structure Of The Rrm Domain Of Sc35
Length = 158
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/52 (80%), Positives = 48/52 (92%)
Query: 10 IEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
+EGM SLKVDNLTYRT+PD LRRVFE+ G VGD+YIPRDR+T+ESRGFAFVR
Sbjct: 67 VEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVR 118
>gi|15055543|ref|NP_115285.1| serine/arginine-rich splicing factor 8 [Homo sapiens]
gi|74761217|sp|Q9BRL6.1|SRSF8_HUMAN RecName: Full=Serine/arginine-rich splicing factor 8; AltName:
Full=Pre-mRNA-splicing factor SRP46; Short=Splicing
factor SRp46; AltName: Full=Splicing factor,
arginine/serine-rich 2B
gi|14141201|gb|AAK54350.1| SRp46 splicing factor [Homo sapiens]
gi|119587358|gb|EAW66954.1| Splicing factor, arginine/serine-rich, 46kD, isoform CRA_a [Homo
sapiens]
gi|119587359|gb|EAW66955.1| Splicing factor, arginine/serine-rich, 46kD, isoform CRA_a [Homo
sapiens]
gi|119587360|gb|EAW66956.1| Splicing factor, arginine/serine-rich, 46kD, isoform CRA_a [Homo
sapiens]
gi|189069077|dbj|BAG35415.1| unnamed protein product [Homo sapiens]
gi|193785751|dbj|BAG51186.1| unnamed protein product [Homo sapiens]
Length = 282
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/61 (70%), Positives = 52/61 (85%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MS GRPPP ++GM++LKVDNLTYRT+PD LRRVFE+ G VGD+YIPR+ T+ RGFAFV
Sbjct: 1 MSCGRPPPDVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFV 60
Query: 61 R 61
R
Sbjct: 61 R 61
>gi|332837526|ref|XP_001139465.2| PREDICTED: serine/arginine-rich splicing factor 8 isoform 1 [Pan
troglodytes]
gi|410045734|ref|XP_003952050.1| PREDICTED: serine/arginine-rich splicing factor 8 isoform 2 [Pan
troglodytes]
gi|410226370|gb|JAA10404.1| serine/arginine-rich splicing factor 8 [Pan troglodytes]
gi|410255620|gb|JAA15777.1| serine/arginine-rich splicing factor 8 [Pan troglodytes]
gi|410295516|gb|JAA26358.1| serine/arginine-rich splicing factor 8 [Pan troglodytes]
gi|410348530|gb|JAA40869.1| serine/arginine-rich splicing factor 8 [Pan troglodytes]
gi|410348532|gb|JAA40870.1| serine/arginine-rich splicing factor 8 [Pan troglodytes]
gi|410348534|gb|JAA40871.1| serine/arginine-rich splicing factor 8 [Pan troglodytes]
Length = 282
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/61 (70%), Positives = 52/61 (85%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MS GRPPP ++GM++LKVDNLTYRT+PD LRRVFE+ G VGD+YIPR+ T+ RGFAFV
Sbjct: 1 MSCGRPPPDVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFV 60
Query: 61 R 61
R
Sbjct: 61 R 61
>gi|34784708|gb|AAH57783.1| SFRS2B protein [Homo sapiens]
Length = 275
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/61 (70%), Positives = 52/61 (85%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MS GRPPP ++GM++LKVDNLTYRT+PD LRRVFE+ G VGD+YIPR+ T+ RGFAFV
Sbjct: 1 MSCGRPPPDVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFV 60
Query: 61 R 61
R
Sbjct: 61 R 61
>gi|355566974|gb|EHH23353.1| hypothetical protein EGK_06805 [Macaca mulatta]
Length = 287
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 42/61 (68%), Positives = 51/61 (83%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MS RPPP ++GM++LKVDNLTYRT+PD LRRVFE+ G VGD+YIPR+ T+ RGFAFV
Sbjct: 1 MSCSRPPPDVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREHHTKAPRGFAFV 60
Query: 61 R 61
R
Sbjct: 61 R 61
>gi|426356205|ref|XP_004045477.1| PREDICTED: uncharacterized protein LOC101137976 [Gorilla gorilla
gorilla]
Length = 496
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 42/61 (68%), Positives = 51/61 (83%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MS GRPPP ++GM++LKVDNLTYRT+PD LRRVFE+ VGD+YIPR+ T+ RGFAFV
Sbjct: 195 MSCGRPPPDVDGMITLKVDNLTYRTSPDSLRRVFEKYWPVGDVYIPREPHTKAPRGFAFV 254
Query: 61 R 61
R
Sbjct: 255 R 255
>gi|51094548|gb|EAL23802.1| similar to Splicing factor, arginine/serine-rich, 46kD [Homo
sapiens]
Length = 549
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 42/61 (68%), Positives = 51/61 (83%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MS GRPPP ++GM++LKVDNLTYRT+PD LRRVFE+ G VGD+YIP + T+ RGFAFV
Sbjct: 257 MSCGRPPPDVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPLEPHTKAPRGFAFV 316
Query: 61 R 61
R
Sbjct: 317 R 317
>gi|443730022|gb|ELU15717.1| hypothetical protein CAPTEDRAFT_175255 [Capitella teleta]
Length = 163
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 42/57 (73%), Positives = 51/57 (89%)
Query: 5 RPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
R PP+IEGMVSLKVDNLTYRT+ +DL + FE+ GEVGD+YIPRD +TRE++GFAFVR
Sbjct: 3 RGPPQIEGMVSLKVDNLTYRTSKEDLLQAFEKYGEVGDVYIPRDPYTRENKGFAFVR 59
>gi|221117570|ref|XP_002161458.1| PREDICTED: uncharacterized protein LOC100200042 isoform 2 [Hydra
magnipapillata]
Length = 195
Score = 91.3 bits (225), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/57 (77%), Positives = 50/57 (87%)
Query: 5 RPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
R PP+IEGMVSLKVDNLTYRT+ +DL R F++ GE+GDIYIPRDR T ESRGFAFVR
Sbjct: 9 RGPPQIEGMVSLKVDNLTYRTSMEDLERYFKKYGELGDIYIPRDRNTHESRGFAFVR 65
>gi|332837543|ref|XP_001139222.2| PREDICTED: uncharacterized protein LOC738374 [Pan troglodytes]
Length = 279
Score = 91.3 bits (225), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 42/61 (68%), Positives = 51/61 (83%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MS GRPPP ++GM++LKVDNLTYRT+PD LRRVFE+ G VGD+YIP + T+ RGFAFV
Sbjct: 1 MSCGRPPPDVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPLEPHTKAPRGFAFV 60
Query: 61 R 61
R
Sbjct: 61 R 61
>gi|332208823|ref|XP_003253510.1| PREDICTED: serine/arginine-rich splicing factor 8 [Nomascus
leucogenys]
Length = 303
Score = 90.9 bits (224), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 42/61 (68%), Positives = 51/61 (83%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MS GRPPP ++GM++LKVDNLTYRT+PD LRRVFE+ G VGD+YIP + T+ RGFAFV
Sbjct: 1 MSCGRPPPDVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPLEHRTKAPRGFAFV 60
Query: 61 R 61
R
Sbjct: 61 R 61
>gi|114613263|ref|XP_519086.2| PREDICTED: uncharacterized protein LOC463398 isoform 2 [Pan
troglodytes]
Length = 293
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/61 (68%), Positives = 51/61 (83%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MS GRP P ++GM++LKVDNLTYRT+PD LRRVFE+ G VGD+YIPR+ T+ RGFAFV
Sbjct: 1 MSCGRPHPDVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFV 60
Query: 61 R 61
R
Sbjct: 61 R 61
>gi|395743396|ref|XP_002822424.2| PREDICTED: uncharacterized protein LOC100448817 [Pongo abelii]
Length = 292
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/61 (68%), Positives = 51/61 (83%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MS GRPPP ++GM++LKVDNLTYRT+ D LRRVFE+ G VGD+YIPR+ T+ RGFAFV
Sbjct: 1 MSCGRPPPDVDGMITLKVDNLTYRTSHDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFV 60
Query: 61 R 61
R
Sbjct: 61 R 61
>gi|51094549|gb|EAL23803.1| similar to Splicing factor, arginine/serine-rich, 46kD [Homo
sapiens]
Length = 293
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/61 (68%), Positives = 51/61 (83%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MS GRPPP ++GM++LKVDNLTYRT+PD LRRVFE+ G VGD+YIP + T+ RGFAFV
Sbjct: 1 MSCGRPPPDVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPLEPHTKAPRGFAFV 60
Query: 61 R 61
R
Sbjct: 61 R 61
>gi|156349201|ref|XP_001621959.1| hypothetical protein NEMVEDRAFT_v1g143061 [Nematostella
vectensis]
gi|156381130|ref|XP_001632119.1| predicted protein [Nematostella vectensis]
gi|156208328|gb|EDO29859.1| predicted protein [Nematostella vectensis]
gi|156219170|gb|EDO40056.1| predicted protein [Nematostella vectensis]
Length = 127
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 42/57 (73%), Positives = 50/57 (87%)
Query: 5 RPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
R PP I+GM SLKVDNLTYRTT +DL++VF++ G++GDIYIPRDR T ESRGFAFVR
Sbjct: 7 RGPPEIDGMTSLKVDNLTYRTTVEDLKQVFKKYGDLGDIYIPRDRNTHESRGFAFVR 63
>gi|426370158|ref|XP_004052038.1| PREDICTED: serine/arginine-rich splicing factor 8 [Gorilla
gorilla gorilla]
Length = 282
Score = 88.2 bits (217), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 41/61 (67%), Positives = 50/61 (81%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MS GRPPP ++GM++LKVDNLTYRT+PD LR VFE+ G VGD+YIPR+ T+ GFAFV
Sbjct: 1 MSCGRPPPDVDGMITLKVDNLTYRTSPDSLRPVFEKYGRVGDVYIPREPHTKAPWGFAFV 60
Query: 61 R 61
R
Sbjct: 61 R 61
>gi|397468421|ref|XP_003805885.1| PREDICTED: uncharacterized protein LOC100969202 [Pan paniscus]
Length = 293
Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 41/61 (67%), Positives = 50/61 (81%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MS GRP P ++GM++LKVDNLTYRT+PD LRRVFE+ G VGD+YIPR+ T+ R FAFV
Sbjct: 1 MSCGRPHPDVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRSFAFV 60
Query: 61 R 61
R
Sbjct: 61 R 61
>gi|444520122|gb|ELV12918.1| Serine/arginine-rich splicing factor 2 [Tupaia chinensis]
Length = 361
Score = 87.8 bits (216), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 40/50 (80%), Positives = 46/50 (92%)
Query: 12 GMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
GM+SLKVDNLTYRT+PD LRRVFE+ G +GD+YIPRDRFT+ SRGFAFVR
Sbjct: 2 GMISLKVDNLTYRTSPDTLRRVFEKYGRIGDVYIPRDRFTKASRGFAFVR 51
>gi|170579742|ref|XP_001894964.1| ADP-ribose pyrophosphatase, mitochondrial precursor [Brugia malayi]
gi|158598261|gb|EDP36190.1| ADP-ribose pyrophosphatase, mitochondrial precursor, putative
[Brugia malayi]
Length = 401
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 49/55 (89%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
PP I+G+ SLK+DN++Y+T P DLRR+FE+ GE+GDI+IPRDR+T++S+GF FVR
Sbjct: 283 PPSIDGLYSLKIDNISYQTAPQDLRRLFEKYGEIGDIHIPRDRYTKQSKGFGFVR 337
>gi|268531152|ref|XP_002630702.1| C. briggsae CBR-RSP-4 protein [Caenorhabditis briggsae]
Length = 195
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 50/57 (87%)
Query: 5 RPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
R P I G+ SLK+DNL+Y+TTP+DLRRVFER G++GD++IPRD+++R+S+GF FVR
Sbjct: 9 RAAPDINGLTSLKIDNLSYQTTPNDLRRVFERYGDIGDVHIPRDKYSRQSKGFGFVR 65
>gi|324510397|gb|ADY44347.1| Splicing factor, arginine/serine-rich 4 [Ascaris suum]
gi|324520781|gb|ADY47708.1| Splicing factor, arginine/serine-rich 4 [Ascaris suum]
Length = 122
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 50/55 (90%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
PP I+G+ SLK+DN++Y+TTP DLRR+FE+ GE+GDI+IPRDR+T++S+GF FVR
Sbjct: 7 PPSIDGLYSLKIDNISYQTTPQDLRRLFEKYGEIGDIHIPRDRYTKQSKGFGFVR 61
>gi|391337692|ref|XP_003743199.1| PREDICTED: uncharacterized protein LOC100907227 [Metaseiulus
occidentalis]
Length = 256
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/62 (70%), Positives = 51/62 (82%), Gaps = 1/62 (1%)
Query: 1 MSYG-RPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAF 59
MS+G R PP I GMVSLKVDNLTYRTT +DL+RVF + G+VGD+YIPR+ ESRGFAF
Sbjct: 1 MSFGGRGPPDIHGMVSLKVDNLTYRTTVEDLKRVFRKHGDVGDVYIPRNPRNNESRGFAF 60
Query: 60 VR 61
VR
Sbjct: 61 VR 62
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/59 (69%), Positives = 48/59 (81%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
+G PP I GMVSLKVDNLTYRTT +DL+RVF + G+VGD+YIPR+ ESRGFAFVR
Sbjct: 63 FGNGPPDIHGMVSLKVDNLTYRTTVEDLKRVFRKHGDVGDVYIPRNPRNNESRGFAFVR 121
>gi|119609849|gb|EAW89443.1| splicing factor, arginine/serine-rich 2, isoform CRA_d [Homo
sapiens]
gi|193783682|dbj|BAG53593.1| unnamed protein product [Homo sapiens]
Length = 209
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/49 (81%), Positives = 45/49 (91%)
Query: 13 MVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
M SLKVDNLTYRT+PD LRRVFE+ G VGD+YIPRDR+T+ESRGFAFVR
Sbjct: 1 MTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVR 49
>gi|17532819|ref|NP_495014.1| Protein RSP-4, isoform b [Caenorhabditis elegans]
gi|351060988|emb|CCD68735.1| Protein RSP-4, isoform b [Caenorhabditis elegans]
Length = 126
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 35/57 (61%), Positives = 49/57 (85%)
Query: 5 RPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
R P I G+ SLK+DNL+Y+TTP+DLRR FER G++GD++IPRD+++R+S+GF FVR
Sbjct: 10 RAAPDINGLTSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVR 66
>gi|393910359|gb|EJD75841.1| hypothetical protein LOAG_17093 [Loa loa]
Length = 203
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 49/55 (89%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
PP I+G+ SLK+DN++Y+T P DLRR+FE+ GE+GDI+IPRDR+T++S+GF FVR
Sbjct: 7 PPSIDGLYSLKIDNISYQTAPQDLRRLFEKYGEIGDIHIPRDRYTKQSKGFGFVR 61
>gi|17532817|ref|NP_495013.1| Protein RSP-4, isoform a [Caenorhabditis elegans]
gi|3929375|sp|Q09511.1|RSP4_CAEEL RecName: Full=Probable splicing factor, arginine/serine-rich 4;
AltName: Full=CeSC35; AltName: Full=RNA-binding protein
srp-2
gi|351060987|emb|CCD68734.1| Protein RSP-4, isoform a [Caenorhabditis elegans]
Length = 196
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 35/57 (61%), Positives = 49/57 (85%)
Query: 5 RPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
R P I G+ SLK+DNL+Y+TTP+DLRR FER G++GD++IPRD+++R+S+GF FVR
Sbjct: 10 RAAPDINGLTSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVR 66
>gi|308493715|ref|XP_003109047.1| CRE-RSP-4 protein [Caenorhabditis remanei]
gi|308247604|gb|EFO91556.1| CRE-RSP-4 protein [Caenorhabditis remanei]
Length = 199
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 35/57 (61%), Positives = 50/57 (87%)
Query: 5 RPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
R P I G+ SLK+DNL+Y+TTP+DLRRVF+R G++GD++IPRD+++R+S+GF FVR
Sbjct: 9 RAAPDINGLTSLKIDNLSYQTTPNDLRRVFDRYGDIGDVHIPRDKYSRQSKGFGFVR 65
>gi|341895771|gb|EGT51706.1| hypothetical protein CAEBREN_26166 [Caenorhabditis brenneri]
gi|341900371|gb|EGT56306.1| hypothetical protein CAEBREN_17888 [Caenorhabditis brenneri]
Length = 200
Score = 84.7 bits (208), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 50/57 (87%)
Query: 5 RPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
R P I G+ SLK+DNL+Y+TTP+DLRRVFER G++GD++IPRD+++R+S+GF FVR
Sbjct: 9 RAAPDIGGLTSLKIDNLSYQTTPNDLRRVFERYGDIGDVHIPRDKYSRQSKGFGFVR 65
>gi|159164254|pdb|2DNM|A Chain A, Solution Structure Of Rna Binding Domain In Srp46
Splicing Factor
Length = 103
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/60 (65%), Positives = 48/60 (80%)
Query: 2 SYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
S G P ++GM++LKVDNLTYRT+PD LRRVFE+ G VGD+YIPR+ T+ RGFAFVR
Sbjct: 2 SSGSSGPDVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVR 61
>gi|313242082|emb|CBY34259.1| unnamed protein product [Oikopleura dioica]
Length = 186
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 38/58 (65%), Positives = 47/58 (81%), Gaps = 1/58 (1%)
Query: 4 GRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
GRPPP I GM SLK+DNL+YRT + LRR F + GE+GD+YIP+D++ ESRGFAFVR
Sbjct: 3 GRPPPNIGGMTSLKIDNLSYRTDSESLRRKFSKYGEIGDVYIPKDKYG-ESRGFAFVR 59
>gi|313227248|emb|CBY22395.1| unnamed protein product [Oikopleura dioica]
Length = 186
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 38/58 (65%), Positives = 47/58 (81%), Gaps = 1/58 (1%)
Query: 4 GRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
GRPPP I GM SLK+DNL+YRT + LRR F + GE+GD+YIP+D++ ESRGFAFVR
Sbjct: 3 GRPPPNIGGMTSLKIDNLSYRTDSESLRRKFSKYGEIGDVYIPKDKYG-ESRGFAFVR 59
>gi|427794699|gb|JAA62801.1| Putative splicing factor sr protein superfamily, partial
[Rhipicephalus pulchellus]
Length = 368
Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 38/46 (82%), Positives = 43/46 (93%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
LKVDNLTYRTTP+DL+RVFER G+VGD+YIPR +TRESRGFAFVR
Sbjct: 1 LKVDNLTYRTTPEDLKRVFERYGDVGDVYIPRHPYTRESRGFAFVR 46
>gi|189502900|gb|ACE06831.1| unknown [Schistosoma japonicum]
Length = 138
Score = 80.9 bits (198), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 42/49 (85%), Positives = 43/49 (87%)
Query: 13 MVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
MVSLKVDNL YRTT DDLRRVF R GEVGDIYIPRD +T ESRGFAFVR
Sbjct: 1 MVSLKVDNLAYRTTIDDLRRVFSRFGEVGDIYIPRDPYTFESRGFAFVR 49
>gi|298707093|emb|CBJ29885.1| splicing factor, arginine/serine-rich 2 (SC-35), isoform CRA_a
[Ectocarpus siliculosus]
Length = 289
Score = 80.9 bits (198), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 38/58 (65%), Positives = 47/58 (81%)
Query: 4 GRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
G PP IEGMV+LKVDN+ Y ++ DDLRR+FE+ GE+GD+Y+PRD T E RGFAFVR
Sbjct: 17 GNGPPNIEGMVTLKVDNVPYNSSIDDLRRIFEKYGELGDVYMPRDLRTGEPRGFAFVR 74
>gi|340372565|ref|XP_003384814.1| PREDICTED: serine/arginine-rich splicing factor 2-like
[Amphimedon queenslandica]
Length = 169
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/49 (73%), Positives = 45/49 (91%)
Query: 13 MVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
MVSLKVDNL++R TPD+++ +FE+ GEVGDIYIPRD +T+ESRGFAFVR
Sbjct: 1 MVSLKVDNLSFRMTPDEIKPIFEKYGEVGDIYIPRDPYTKESRGFAFVR 49
>gi|9837439|gb|AAG00575.1|AF288041_1 splicing factor arginine/serine rich 2 [Oryzias latipes]
Length = 211
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/47 (78%), Positives = 44/47 (93%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
SLKVDNLTYRT+P+ LRRVFE+ G VGD+YIPRDR+++ESRGFAFVR
Sbjct: 1 SLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYSKESRGFAFVR 47
>gi|313228380|emb|CBY23531.1| unnamed protein product [Oikopleura dioica]
gi|313241505|emb|CBY33754.1| unnamed protein product [Oikopleura dioica]
Length = 201
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 45/57 (78%), Gaps = 1/57 (1%)
Query: 5 RPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
RPPP I GM SLK+DNL+YRT + LRR F + GE+GD+YIP+D+ ESRGFAFVR
Sbjct: 4 RPPPDIGGMTSLKIDNLSYRTDAESLRRTFSKFGEIGDVYIPKDKHG-ESRGFAFVR 59
>gi|119609847|gb|EAW89441.1| splicing factor, arginine/serine-rich 2, isoform CRA_b [Homo
sapiens]
Length = 208
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/61 (65%), Positives = 45/61 (73%), Gaps = 13/61 (21%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPP +EGM SLKVDNLTYRT+PD +YIPRDR+T+ESRGFAFV
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPD-------------TVYIPRDRYTKESRGFAFV 47
Query: 61 R 61
R
Sbjct: 48 R 48
>gi|14141216|gb|AAK54351.1| SRp46 splicing factor [Homo sapiens]
Length = 272
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/51 (70%), Positives = 44/51 (86%)
Query: 11 EGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
+GM++LKVDNLTYRT+PD LRRVFE+ G VGD+YIPR+ T+ RGFAFVR
Sbjct: 1 DGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVR 51
>gi|196000460|ref|XP_002110098.1| hypothetical protein TRIADDRAFT_17694 [Trichoplax adhaerens]
gi|190588222|gb|EDV28264.1| hypothetical protein TRIADDRAFT_17694, partial [Trichoplax
adhaerens]
Length = 89
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/54 (68%), Positives = 45/54 (83%), Gaps = 1/54 (1%)
Query: 8 PRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
P I M SLKVDN+TYRTT DDL+R+F++ GE+GD+YIPRDR ESRG+AFVR
Sbjct: 1 PEISSMTSLKVDNITYRTTVDDLKRIFDKYGEIGDVYIPRDRRG-ESRGYAFVR 53
>gi|395841993|ref|XP_003793806.1| PREDICTED: uncharacterized protein LOC100943026 [Otolemur
garnettii]
Length = 308
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/61 (60%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSY RP + E M S+KV+NLTY T+ LRR+FE+ G + D+YIPRDR T ESRGFAF+
Sbjct: 1 MSYSRPL-KGEVMTSIKVNNLTYHTSSYTLRRMFEKYGPIDDVYIPRDRLTNESRGFAFI 59
Query: 61 R 61
R
Sbjct: 60 R 60
>gi|299115545|emb|CBN75749.1| serine/arginine rich splicing factor, putative [Ectocarpus
siliculosus]
Length = 308
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/49 (63%), Positives = 40/49 (81%)
Query: 13 MVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
MV+LKVDN+ + +P++LR VFE CG++GD+YIPRD T E RGFAFVR
Sbjct: 1 MVTLKVDNIAFTCSPEELREVFEGCGKLGDVYIPRDMRTGEPRGFAFVR 49
>gi|255084425|ref|XP_002508787.1| predicted protein [Micromonas sp. RCC299]
gi|226524064|gb|ACO70045.1| predicted protein [Micromonas sp. RCC299]
Length = 248
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 42/55 (76%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
PP I G+ SLK+DNL Y T + L+ +F + GE+GD+Y+PRD +T+ SRGFAFVR
Sbjct: 24 PPDISGLYSLKLDNLDYSVTLEQLKELFGKHGEIGDVYMPRDYYTKRSRGFAFVR 78
>gi|301096303|ref|XP_002897249.1| mannitol dehydrogenase, putative [Phytophthora infestans T30-4]
gi|262107334|gb|EEY65386.1| mannitol dehydrogenase, putative [Phytophthora infestans T30-4]
Length = 543
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 42/55 (76%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
PP ++ M +LKVDN+ ++ D+LR +F + GE+GD+YIPR R + ESRGFAFVR
Sbjct: 350 PPNVDSMFTLKVDNVPFQIGSDELRDLFSKFGEIGDVYIPRARGSNESRGFAFVR 404
>gi|414869213|tpg|DAA47770.1| TPA: hypothetical protein ZEAMMB73_478975 [Zea mays]
Length = 283
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 42/55 (76%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
PP I SL V N+++RTT DDL +FERCG+V D++IPRDR T +SRGFAFVR
Sbjct: 9 PPDIRDTFSLLVLNISFRTTADDLFPLFERCGKVVDVFIPRDRRTGDSRGFAFVR 63
>gi|224035925|gb|ACN37038.1| unknown [Zea mays]
gi|448878196|gb|AGE46061.1| arginine/serine-rich splicing factor SC32 transcript III [Zea
mays]
Length = 284
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 42/55 (76%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
PP I SL V N+++RTT DDL +FERCG+V D++IPRDR T +SRGFAFVR
Sbjct: 9 PPDIRDTFSLLVLNISFRTTADDLFPLFERCGKVVDVFIPRDRRTGDSRGFAFVR 63
>gi|195612902|gb|ACG28281.1| splicing factor, arginine/serine-rich 2 [Zea mays]
gi|414869216|tpg|DAA47773.1| TPA: splicing factor, arginine/serine-rich 2 [Zea mays]
gi|448878194|gb|AGE46060.1| arginine/serine-rich splicing factor SC32 transcript II [Zea
mays]
Length = 248
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 42/55 (76%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
PP I SL V N+++RTT DDL +FERCG+V D++IPRDR T +SRGFAFVR
Sbjct: 9 PPDIRDTFSLLVLNISFRTTADDLFPLFERCGKVVDVFIPRDRRTGDSRGFAFVR 63
>gi|195621804|gb|ACG32732.1| splicing factor, arginine/serine-rich 2 [Zea mays]
Length = 260
Score = 68.2 bits (165), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 42/55 (76%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
PP I SL V N+++RTT DDL +FERCG+V D++IPRDR T +SRGFAFVR
Sbjct: 9 PPDIRDTFSLLVLNISFRTTADDLFPLFERCGKVVDVFIPRDRRTGDSRGFAFVR 63
>gi|212275520|ref|NP_001130064.1| uncharacterized protein LOC100191156 [Zea mays]
gi|194688202|gb|ACF78185.1| unknown [Zea mays]
gi|414869215|tpg|DAA47772.1| TPA: splicing factor, arginine/serine-rich 2 [Zea mays]
gi|448878192|gb|AGE46059.1| arginine/serine-rich splicing factor SC32 transcript I [Zea mays]
Length = 256
Score = 68.2 bits (165), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 42/55 (76%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
PP I SL V N+++RTT DDL +FERCG+V D++IPRDR T +SRGFAFVR
Sbjct: 9 PPDIRDTFSLLVLNISFRTTADDLFPLFERCGKVVDVFIPRDRRTGDSRGFAFVR 63
>gi|414869214|tpg|DAA47771.1| TPA: hypothetical protein ZEAMMB73_478975 [Zea mays]
Length = 254
Score = 67.8 bits (164), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 42/55 (76%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
PP I SL V N+++RTT DDL +FERCG+V D++IPRDR T +SRGFAFVR
Sbjct: 9 PPDIRDTFSLLVLNISFRTTADDLFPLFERCGKVVDVFIPRDRRTGDSRGFAFVR 63
>gi|167518892|ref|XP_001743786.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163777748|gb|EDQ91364.1| predicted protein [Monosiga brevicollis MX1]
Length = 209
Score = 67.8 bits (164), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/59 (59%), Positives = 43/59 (72%), Gaps = 1/59 (1%)
Query: 4 GRPPP-RIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
GRPPP ++ M SLKVDN+T T D +R +F+ GE+GDIY+PRDR T SRGF FVR
Sbjct: 3 GRPPPSNVDAMFSLKVDNITSDMTEDMMRDLFKDFGEIGDIYMPRDRNTNRSRGFCFVR 61
>gi|303275063|ref|XP_003056831.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461183|gb|EEH58476.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 96
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 38/54 (70%)
Query: 8 PRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
P I GM SLKVDN+ YR +R +F GE+GD+Y+PRDR T SRGFAFVR
Sbjct: 5 PDISGMYSLKVDNIAYRVDVGRVREMFAAHGEIGDVYMPRDRTTGNSRGFAFVR 58
>gi|115473447|ref|NP_001060322.1| Os07g0623300 [Oryza sativa Japonica Group]
gi|33146621|dbj|BAC79909.1| putative splicing factor, arginine/serine-rich 2 (Splicing factor
SC35) [Oryza sativa Japonica Group]
gi|113611858|dbj|BAF22236.1| Os07g0623300 [Oryza sativa Japonica Group]
gi|215687327|dbj|BAG91873.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222637485|gb|EEE67617.1| hypothetical protein OsJ_25178 [Oryza sativa Japonica Group]
Length = 275
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 41/55 (74%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
PP I SL V N+T+RTT DDL +FE+ GEV DIYIPRDR T +SRGFAFVR
Sbjct: 9 PPPIRDTYSLLVLNITFRTTADDLSPLFEKYGEVVDIYIPRDRRTGDSRGFAFVR 63
>gi|218200049|gb|EEC82476.1| hypothetical protein OsI_26921 [Oryza sativa Indica Group]
Length = 271
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 41/55 (74%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
PP I SL V N+T+RTT DDL +FE+ GEV DIYIPRDR T +SRGFAFVR
Sbjct: 9 PPPIRDTYSLLVLNITFRTTADDLSPLFEKYGEVVDIYIPRDRRTGDSRGFAFVR 63
>gi|238011430|gb|ACR36750.1| unknown [Zea mays]
gi|414590933|tpg|DAA41504.1| TPA: hypothetical protein ZEAMMB73_776046 [Zea mays]
gi|414590934|tpg|DAA41505.1| TPA: hypothetical protein ZEAMMB73_776046 [Zea mays]
Length = 190
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 42/56 (75%)
Query: 6 PPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
PPP I SL V N+T+RTT DDL +F++ GE+ DIYIPRDR T +SRGFAFVR
Sbjct: 9 PPPPIRDTYSLLVLNITFRTTADDLFPLFDKYGEIVDIYIPRDRRTGDSRGFAFVR 64
>gi|194708586|gb|ACF88377.1| unknown [Zea mays]
gi|414590930|tpg|DAA41501.1| TPA: hypothetical protein ZEAMMB73_776046 [Zea mays]
gi|414590931|tpg|DAA41502.1| TPA: hypothetical protein ZEAMMB73_776046 [Zea mays]
Length = 238
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 42/56 (75%)
Query: 6 PPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
PPP I SL V N+T+RTT DDL +F++ GE+ DIYIPRDR T +SRGFAFVR
Sbjct: 9 PPPPIRDTYSLLVLNITFRTTADDLFPLFDKYGEIVDIYIPRDRRTGDSRGFAFVR 64
>gi|226530532|ref|NP_001140562.1| uncharacterized protein LOC100272627 [Zea mays]
gi|194699996|gb|ACF84082.1| unknown [Zea mays]
gi|414590932|tpg|DAA41503.1| TPA: hypothetical protein ZEAMMB73_776046 [Zea mays]
Length = 251
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 42/56 (75%)
Query: 6 PPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
PPP I SL V N+T+RTT DDL +F++ GE+ DIYIPRDR T +SRGFAFVR
Sbjct: 9 PPPPIRDTYSLLVLNITFRTTADDLFPLFDKYGEIVDIYIPRDRRTGDSRGFAFVR 64
>gi|414887662|tpg|DAA63676.1| TPA: hypothetical protein ZEAMMB73_707044 [Zea mays]
Length = 207
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 42/56 (75%)
Query: 6 PPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
PPP I SL V N+T+RTT DDL +F++ GE+ DIYIPRDR T +SRGFAFVR
Sbjct: 9 PPPPIRDTYSLLVLNITFRTTADDLFPLFDKYGEIVDIYIPRDRRTGDSRGFAFVR 64
>gi|348671618|gb|EGZ11439.1| hypothetical protein PHYSODRAFT_435859 [Phytophthora sojae]
Length = 92
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 41/54 (75%)
Query: 8 PRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
P ++ M +LKVDN+ ++ D+LR +F + GE+GD+YIPR R + ESRGFAFVR
Sbjct: 1 PNVDNMFTLKVDNVPFQIGSDELRDLFSKFGEIGDVYIPRARGSNESRGFAFVR 54
>gi|145346679|ref|XP_001417812.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578040|gb|ABO96105.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 98
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 41/54 (75%)
Query: 8 PRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
P I +VS+K+DN++Y +DLR FE+ G+VGD+YIP++R + +RGFAFVR
Sbjct: 1 PDISNLVSVKIDNVSYELREEDLREAFEKFGDVGDVYIPKERGSYRARGFAFVR 54
>gi|293334639|ref|NP_001169755.1| uncharacterized protein LOC100383636 [Zea mays]
gi|224031469|gb|ACN34810.1| unknown [Zea mays]
gi|414887660|tpg|DAA63674.1| TPA: hypothetical protein ZEAMMB73_707044 [Zea mays]
gi|414887661|tpg|DAA63675.1| TPA: hypothetical protein ZEAMMB73_707044 [Zea mays]
Length = 246
Score = 66.2 bits (160), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 42/56 (75%)
Query: 6 PPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
PPP I SL V N+T+RTT DDL +F++ GE+ DIYIPRDR T +SRGFAFVR
Sbjct: 9 PPPPIRDTYSLLVLNITFRTTADDLFPLFDKYGEIVDIYIPRDRRTGDSRGFAFVR 64
>gi|218192960|gb|EEC75387.1| hypothetical protein OsI_11855 [Oryza sativa Indica Group]
Length = 218
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 41/55 (74%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
PP + SL V N+++RTT DDL +F+RCGEV DI IPRDR T +SRGFAFVR
Sbjct: 9 PPAVRDSYSLLVLNVSFRTTADDLLALFDRCGEVLDIRIPRDRRTGDSRGFAFVR 63
>gi|448878411|gb|AGE46168.1| arginine/serine-rich splicing factor SC39 transcript II
[Physcomitrella patens subsp. patens]
Length = 167
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/60 (60%), Positives = 44/60 (73%), Gaps = 1/60 (1%)
Query: 3 YGRP-PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
+GR PP I SL V N+T+RT+ DDL +F+R G+V DI+IPRDR T ESRGFAFVR
Sbjct: 4 FGRAGPPDIRDTYSLLVLNITFRTSADDLYPLFDRYGKVVDIFIPRDRRTGESRGFAFVR 63
>gi|302820371|ref|XP_002991853.1| hypothetical protein SELMODRAFT_134332 [Selaginella
moellendorffii]
gi|302822709|ref|XP_002993011.1| hypothetical protein SELMODRAFT_136271 [Selaginella
moellendorffii]
gi|300139211|gb|EFJ05957.1| hypothetical protein SELMODRAFT_136271 [Selaginella
moellendorffii]
gi|300140391|gb|EFJ07115.1| hypothetical protein SELMODRAFT_134332 [Selaginella
moellendorffii]
Length = 101
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/61 (59%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
Query: 2 SYGRP-PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+GR PP I SL V N+T+RTT DDL +F+R G+V DI+IPRDR + ESRGFAFV
Sbjct: 3 HFGRAGPPDIRDTYSLLVLNITFRTTADDLYPLFDRYGKVVDIFIPRDRRSGESRGFAFV 62
Query: 61 R 61
R
Sbjct: 63 R 63
>gi|115453325|ref|NP_001050263.1| Os03g0388000 [Oryza sativa Japonica Group]
gi|50582745|gb|AAT78815.1| putative splicing factor (having alternative splicing products)
[Oryza sativa Japonica Group]
gi|108708536|gb|ABF96331.1| Arginine/serine-rich splicing factor, putative, expressed [Oryza
sativa Japonica Group]
gi|113548734|dbj|BAF12177.1| Os03g0388000 [Oryza sativa Japonica Group]
gi|222625042|gb|EEE59174.1| hypothetical protein OsJ_11097 [Oryza sativa Japonica Group]
Length = 205
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 41/55 (74%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
PP + SL V N+++RTT DDL +F+RCGEV DI IPRDR T +SRGFAFVR
Sbjct: 9 PPAVRDSYSLLVLNVSFRTTADDLLALFDRCGEVLDIRIPRDRRTGDSRGFAFVR 63
>gi|108708538|gb|ABF96333.1| Arginine/serine-rich splicing factor, putative, expressed [Oryza
sativa Japonica Group]
Length = 206
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 41/55 (74%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
PP + SL V N+++RTT DDL +F+RCGEV DI IPRDR T +SRGFAFVR
Sbjct: 9 PPAVRDSYSLLVLNVSFRTTADDLLALFDRCGEVLDIRIPRDRRTGDSRGFAFVR 63
>gi|357490719|ref|XP_003615647.1| Splicing factor, arginine/serine-rich [Medicago truncatula]
gi|355516982|gb|AES98605.1| Splicing factor, arginine/serine-rich [Medicago truncatula]
Length = 140
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/61 (59%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
Query: 2 SYGRP-PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+GR PP I SL V N+T+RTT DDL +F++ G+V DI+IPRDR T ESRGFAFV
Sbjct: 3 HFGRQGPPDIADTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGESRGFAFV 62
Query: 61 R 61
R
Sbjct: 63 R 63
>gi|354502929|ref|XP_003513534.1| PREDICTED: hypothetical protein LOC100763629 [Cricetulus griseus]
Length = 1084
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 31/60 (51%), Positives = 39/60 (65%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSY P P ++GM SLKVDNL T+ L+R+FE G VGD+YI + T E GFAF+
Sbjct: 1 MSYSDPLPNVKGMTSLKVDNLANHTSSSTLKRLFEEYGPVGDVYIAPNHLTEERYGFAFI 60
>gi|224099521|ref|XP_002334472.1| predicted protein [Populus trichocarpa]
gi|222872360|gb|EEF09491.1| predicted protein [Populus trichocarpa]
Length = 101
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/60 (60%), Positives = 44/60 (73%), Gaps = 1/60 (1%)
Query: 3 YGRP-PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
+GR PP I SL V N+T+RTT DDL +F++ G+V DI+IPRDR T ESRGFAFVR
Sbjct: 4 FGRSGPPDIADTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGESRGFAFVR 63
>gi|357121974|ref|XP_003562691.1| PREDICTED: uncharacterized protein LOC100826320 [Brachypodium
distachyon]
Length = 238
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 41/55 (74%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
PP I SL V N+T+RTT DDL +F++ GEV DIYIPRDR T +SRGFAFVR
Sbjct: 9 PPPIRDTYSLLVLNITFRTTADDLFPLFDKYGEVVDIYIPRDRRTGDSRGFAFVR 63
>gi|448878413|gb|AGE46169.1| arginine/serine-rich splicing factor SC39 transcript III
[Physcomitrella patens subsp. patens]
Length = 104
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/60 (60%), Positives = 44/60 (73%), Gaps = 1/60 (1%)
Query: 3 YGRP-PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
+GR PP I SL V N+T+RT+ DDL +F+R G+V DI+IPRDR T ESRGFAFVR
Sbjct: 4 FGRAGPPDIRDTYSLLVLNITFRTSADDLYPLFDRYGKVVDIFIPRDRRTGESRGFAFVR 63
>gi|224073347|ref|XP_002304081.1| predicted protein [Populus trichocarpa]
gi|222841513|gb|EEE79060.1| predicted protein [Populus trichocarpa]
Length = 142
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/61 (59%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
Query: 2 SYGRP-PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+GR PP I SL V N+T+RTT DDL +F++ G+V DI+IPRDR T ESRGFAFV
Sbjct: 3 HFGRSGPPDIADTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGESRGFAFV 62
Query: 61 R 61
R
Sbjct: 63 R 63
>gi|297789035|ref|XP_002862530.1| hypothetical protein ARALYDRAFT_920582 [Arabidopsis lyrata subsp.
lyrata]
gi|297308107|gb|EFH38788.1| hypothetical protein ARALYDRAFT_920582 [Arabidopsis lyrata subsp.
lyrata]
Length = 116
Score = 64.7 bits (156), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/61 (55%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
Query: 2 SYGRP-PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+GR PP I SL V N+T+RTT DDL +F + G+V D++IPRDR T +SRGFAFV
Sbjct: 3 HFGRSGPPDISDTYSLLVLNITFRTTADDLYPLFAKYGKVVDVFIPRDRRTGDSRGFAFV 62
Query: 61 R 61
R
Sbjct: 63 R 63
>gi|448878419|gb|AGE46172.1| arginine/serine-rich splicing factor SC37 transcript III
[Physcomitrella patens subsp. patens]
Length = 257
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/60 (60%), Positives = 44/60 (73%), Gaps = 1/60 (1%)
Query: 3 YGRP-PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
+GR PP I SL V N+T+RT+ DDL +F+R G+V DI+IPRDR T ESRGFAFVR
Sbjct: 4 FGRAGPPDIRDTYSLLVLNITFRTSADDLYPLFDRYGKVVDIFIPRDRRTGESRGFAFVR 63
>gi|224082127|ref|XP_002306575.1| predicted protein [Populus trichocarpa]
gi|222856024|gb|EEE93571.1| predicted protein [Populus trichocarpa]
Length = 101
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
Query: 2 SYGRP-PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+GR PP I SL V N+T+RTT DDL +F++ G+V D++IPRDR T ESRGFAFV
Sbjct: 3 HFGRSGPPDIRDTFSLLVLNITFRTTADDLFPLFDKYGKVVDVFIPRDRRTGESRGFAFV 62
Query: 61 R 61
R
Sbjct: 63 R 63
>gi|448878328|gb|AGE46127.1| arginine/serine-rich splicing factor SC31 transcript V [Sorghum
bicolor]
Length = 185
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 44/60 (73%), Gaps = 1/60 (1%)
Query: 3 YGRP-PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
+GR PP I SL V N+++RTT DDL +FER G+V D++IPRDR T +SRGFAFVR
Sbjct: 4 FGRSGPPDIRDTFSLLVLNISFRTTADDLYPLFERYGKVVDVFIPRDRRTGDSRGFAFVR 63
>gi|448878314|gb|AGE46120.1| arginine/serine-rich splicing factor SC30 transcript I [Sorghum
bicolor]
Length = 250
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 41/55 (74%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
PP I SL V N+T+RTT DDL +F++ GE+ DIYIPRDR T +SRGFAFVR
Sbjct: 9 PPPIRDTYSLLVLNITFRTTADDLFPLFDKYGEIVDIYIPRDRRTGDSRGFAFVR 63
>gi|168015818|ref|XP_001760447.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688461|gb|EDQ74838.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 259
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 41/55 (74%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
PP I SL V N+T+RT+ DDL +F+R G+V DI+IPRDR T ESRGFAFVR
Sbjct: 9 PPDIRDTYSLLVLNITFRTSADDLYPLFDRYGKVVDIFIPRDRRTGESRGFAFVR 63
>gi|448878330|gb|AGE46128.1| arginine/serine-rich splicing factor SC31 transcript VI [Sorghum
bicolor]
Length = 107
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 44/60 (73%), Gaps = 1/60 (1%)
Query: 3 YGRP-PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
+GR PP I SL V N+++RTT DDL +FER G+V D++IPRDR T +SRGFAFVR
Sbjct: 4 FGRSGPPDIRDTFSLLVLNISFRTTADDLYPLFERYGKVVDVFIPRDRRTGDSRGFAFVR 63
>gi|448878322|gb|AGE46124.1| arginine/serine-rich splicing factor SC31 transcript II [Sorghum
bicolor]
Length = 180
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/55 (60%), Positives = 41/55 (74%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
PP I SL V N+++RTT DDL +FER G+V D++IPRDR T +SRGFAFVR
Sbjct: 9 PPDIRDTFSLLVLNISFRTTADDLYPLFERYGKVVDVFIPRDRRTGDSRGFAFVR 63
>gi|448878326|gb|AGE46126.1| arginine/serine-rich splicing factor SC31 transcript IV [Sorghum
bicolor]
Length = 273
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/55 (60%), Positives = 41/55 (74%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
PP I SL V N+++RTT DDL +FER G+V D++IPRDR T +SRGFAFVR
Sbjct: 9 PPDIRDTFSLLVLNISFRTTADDLYPLFERYGKVVDVFIPRDRRTGDSRGFAFVR 63
>gi|448878320|gb|AGE46123.1| arginine/serine-rich splicing factor SC31 transcript I [Sorghum
bicolor]
Length = 268
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/55 (60%), Positives = 41/55 (74%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
PP I SL V N+++RTT DDL +FER G+V D++IPRDR T +SRGFAFVR
Sbjct: 9 PPDIRDTFSLLVLNISFRTTADDLYPLFERYGKVVDVFIPRDRRTGDSRGFAFVR 63
>gi|225448281|ref|XP_002274860.1| PREDICTED: uncharacterized protein LOC100242306 [Vitis vinifera]
gi|296086805|emb|CBI32954.3| unnamed protein product [Vitis vinifera]
Length = 255
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 41/55 (74%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
PP I+ SL V N+T+RTT DDL F++ G+V DI+IPRDR T ESRGFAFVR
Sbjct: 9 PPDIKDTFSLLVLNITFRTTADDLFPFFDKYGKVVDIFIPRDRRTGESRGFAFVR 63
>gi|452822795|gb|EME29811.1| splicing factor, arginine/serine-rich 2 [Galdieria sulphuraria]
Length = 211
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/55 (58%), Positives = 40/55 (72%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
PP I G SL V N+++RTTP+DL +F++ GEV D YIPR+R SRGFAFVR
Sbjct: 20 PPDISGTYSLLVLNISFRTTPNDLTPLFDKYGEVVDCYIPRNRRNGHSRGFAFVR 74
>gi|168064593|ref|XP_001784245.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664211|gb|EDQ50939.1| predicted protein [Physcomitrella patens subsp. patens]
gi|448878415|gb|AGE46170.1| arginine/serine-rich splicing factor SC37 transcript I
[Physcomitrella patens subsp. patens]
gi|448878417|gb|AGE46171.1| arginine/serine-rich splicing factor SC37 transcript II
[Physcomitrella patens subsp. patens]
Length = 319
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 41/55 (74%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
PP I SL V N+T+RT+ DDL +F+R G+V DI+IPRDR T ESRGFAFVR
Sbjct: 9 PPDIRDTYSLLVLNITFRTSADDLYPLFDRYGKVVDIFIPRDRRTGESRGFAFVR 63
>gi|448878409|gb|AGE46167.1| arginine/serine-rich splicing factor SC39 transcript I
[Physcomitrella patens subsp. patens]
Length = 340
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 41/55 (74%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
PP I SL V N+T+RT+ DDL +F+R G+V DI+IPRDR T ESRGFAFVR
Sbjct: 9 PPDIRDTYSLLVLNITFRTSADDLYPLFDRYGKVVDIFIPRDRRTGESRGFAFVR 63
>gi|357490717|ref|XP_003615646.1| Splicing factor, arginine/serine-rich [Medicago truncatula]
gi|217073250|gb|ACJ84984.1| unknown [Medicago truncatula]
gi|355516981|gb|AES98604.1| Splicing factor, arginine/serine-rich [Medicago truncatula]
Length = 267
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 41/55 (74%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
PP I SL V N+T+RTT DDL +F++ G+V DI+IPRDR T ESRGFAFVR
Sbjct: 9 PPDIADTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGESRGFAFVR 63
>gi|226510383|ref|NP_001140384.1| hypothetical protein [Zea mays]
gi|194699256|gb|ACF83712.1| unknown [Zea mays]
gi|413925181|gb|AFW65113.1| hypothetical protein ZEAMMB73_855473 [Zea mays]
gi|448878214|gb|AGE46070.1| arginine/serine-rich splicing factor SC30 transcript IX [Zea
mays]
Length = 274
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/55 (60%), Positives = 41/55 (74%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
PP I SL V N+++RTT DDL +FER G+V D++IPRDR T +SRGFAFVR
Sbjct: 9 PPDIRDTFSLLVLNISFRTTADDLFPLFERYGKVVDVFIPRDRRTGDSRGFAFVR 63
>gi|448878206|gb|AGE46066.1| arginine/serine-rich splicing factor SC30 transcript V [Zea mays]
Length = 262
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/55 (60%), Positives = 41/55 (74%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
PP I SL V N+++RTT DDL +FER G+V D++IPRDR T +SRGFAFVR
Sbjct: 9 PPDIRDTFSLLVLNISFRTTADDLFPLFERYGKVVDVFIPRDRRTGDSRGFAFVR 63
>gi|238006960|gb|ACR34515.1| unknown [Zea mays]
gi|413925185|gb|AFW65117.1| hypothetical protein ZEAMMB73_855473 [Zea mays]
gi|413925186|gb|AFW65118.1| hypothetical protein ZEAMMB73_855473 [Zea mays]
gi|448878198|gb|AGE46062.1| arginine/serine-rich splicing factor SC30 transcript I [Zea mays]
gi|448878204|gb|AGE46065.1| arginine/serine-rich splicing factor SC30 transcript IV [Zea
mays]
Length = 264
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/55 (60%), Positives = 41/55 (74%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
PP I SL V N+++RTT DDL +FER G+V D++IPRDR T +SRGFAFVR
Sbjct: 9 PPDIRDTFSLLVLNISFRTTADDLFPLFERYGKVVDVFIPRDRRTGDSRGFAFVR 63
>gi|448878200|gb|AGE46063.1| arginine/serine-rich splicing factor SC30 transcript II [Zea
mays]
Length = 254
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/55 (60%), Positives = 41/55 (74%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
PP I SL V N+++RTT DDL +FER G+V D++IPRDR T +SRGFAFVR
Sbjct: 9 PPDIRDTFSLLVLNISFRTTADDLFPLFERYGKVVDVFIPRDRRTGDSRGFAFVR 63
>gi|448878208|gb|AGE46067.1| arginine/serine-rich splicing factor SC30 transcript VI [Zea
mays]
Length = 270
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/55 (60%), Positives = 41/55 (74%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
PP I SL V N+++RTT DDL +FER G+V D++IPRDR T +SRGFAFVR
Sbjct: 9 PPDIRDTFSLLVLNISFRTTADDLFPLFERYGKVVDVFIPRDRRTGDSRGFAFVR 63
>gi|553620|gb|AAA60162.1| splicing factor, partial [Homo sapiens]
Length = 34
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/34 (85%), Positives = 31/34 (91%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVF 34
MSYGRPPP +EGM SLKVDNLTYRT+PD LRRVF
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVF 34
>gi|224066947|ref|XP_002302293.1| predicted protein [Populus trichocarpa]
gi|222844019|gb|EEE81566.1| predicted protein [Populus trichocarpa]
Length = 178
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 44/60 (73%), Gaps = 1/60 (1%)
Query: 3 YGRP-PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
+GR PP I SL V N+T+RTT DDL +F++ G+V D++IPRDR T ESRGFAFVR
Sbjct: 4 FGRSGPPDIRDTFSLLVLNITFRTTADDLFPLFDKYGKVVDVFIPRDRRTGESRGFAFVR 63
>gi|413925182|gb|AFW65114.1| hypothetical protein ZEAMMB73_855473 [Zea mays]
Length = 268
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/55 (60%), Positives = 41/55 (74%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
PP I SL V N+++RTT DDL +FER G+V D++IPRDR T +SRGFAFVR
Sbjct: 9 PPDIRDTFSLLVLNISFRTTADDLFPLFERYGKVVDVFIPRDRRTGDSRGFAFVR 63
>gi|224032171|gb|ACN35161.1| unknown [Zea mays]
gi|413925183|gb|AFW65115.1| splicing factor, arginine/serine-rich 2 isoform 1 [Zea mays]
gi|413925184|gb|AFW65116.1| splicing factor, arginine/serine-rich 2 isoform 2 [Zea mays]
gi|448878210|gb|AGE46068.1| arginine/serine-rich splicing factor SC30 transcript VII [Zea
mays]
Length = 256
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/55 (60%), Positives = 41/55 (74%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
PP I SL V N+++RTT DDL +FER G+V D++IPRDR T +SRGFAFVR
Sbjct: 9 PPDIRDTFSLLVLNISFRTTADDLFPLFERYGKVVDVFIPRDRRTGDSRGFAFVR 63
>gi|3334756|emb|CAA76346.1| putative arginine/serine-rich splicing factor [Medicago sativa
subsp. x varia]
Length = 286
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/55 (60%), Positives = 41/55 (74%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
PP I SL V N+T+RTT DDL +F++ G+V DI+IP+DR T ESRGFAFVR
Sbjct: 9 PPDISDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPKDRRTGESRGFAFVR 63
>gi|448878212|gb|AGE46069.1| arginine/serine-rich splicing factor SC30 transcript VIII [Zea
mays]
Length = 261
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/55 (60%), Positives = 41/55 (74%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
PP I SL V N+++RTT DDL +FER G+V D++IPRDR T +SRGFAFVR
Sbjct: 9 PPDIRDTFSLLVLNISFRTTADDLFPLFERYGKVVDVFIPRDRRTGDSRGFAFVR 63
>gi|195657783|gb|ACG48359.1| splicing factor, arginine/serine-rich 2 [Zea mays]
Length = 254
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/55 (60%), Positives = 41/55 (74%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
PP I SL V N+++RTT DDL +FER G+V D++IPRDR T +SRGFAFVR
Sbjct: 9 PPDIRDTFSLLVLNISFRTTADDLFPLFERYGKVVDVFIPRDRRTGDSRGFAFVR 63
>gi|217073798|gb|ACJ85259.1| unknown [Medicago truncatula]
Length = 280
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/55 (60%), Positives = 41/55 (74%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
PP I SL V N+T+RTT DDL +F++ G+V DI+IP+DR T ESRGFAFVR
Sbjct: 9 PPDISDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPKDRRTGESRGFAFVR 63
>gi|449438193|ref|XP_004136874.1| PREDICTED: uncharacterized protein LOC101219227 [Cucumis sativus]
Length = 283
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/55 (60%), Positives = 40/55 (72%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
PP I SL V N+T+RTT DDL +F + G+V DI+IPRDR T +SRGFAFVR
Sbjct: 9 PPDITDTYSLLVLNITFRTTADDLYPLFHKYGKVVDIFIPRDRRTGDSRGFAFVR 63
>gi|302765723|ref|XP_002966282.1| hypothetical protein SELMODRAFT_7952 [Selaginella moellendorffii]
gi|302793049|ref|XP_002978290.1| hypothetical protein SELMODRAFT_7949 [Selaginella moellendorffii]
gi|300154311|gb|EFJ20947.1| hypothetical protein SELMODRAFT_7949 [Selaginella moellendorffii]
gi|300165702|gb|EFJ32309.1| hypothetical protein SELMODRAFT_7952 [Selaginella moellendorffii]
Length = 92
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/55 (60%), Positives = 41/55 (74%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
PP I SL V N+T+RT+ DDL +F+R G+V DI+IPRDR T +SRGFAFVR
Sbjct: 1 PPDIRDTYSLLVLNITFRTSADDLFPLFDRYGKVVDIFIPRDRRTGDSRGFAFVR 55
>gi|449478880|ref|XP_004155443.1| PREDICTED: uncharacterized protein LOC101223695 [Cucumis sativus]
Length = 283
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/55 (60%), Positives = 40/55 (72%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
PP I SL V N+T+RTT DDL +F + G+V DI+IPRDR T +SRGFAFVR
Sbjct: 9 PPDITDTYSLLVLNITFRTTADDLYPLFHKYGKVVDIFIPRDRRTGDSRGFAFVR 63
>gi|255642028|gb|ACU21281.1| unknown [Glycine max]
Length = 254
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/55 (60%), Positives = 41/55 (74%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
PP I SL V N+T+RTT DDL +F++ G+V DI+IP+DR T ESRGFAFVR
Sbjct: 9 PPDISDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPKDRRTGESRGFAFVR 63
>gi|388519919|gb|AFK48021.1| unknown [Medicago truncatula]
Length = 281
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/55 (60%), Positives = 41/55 (74%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
PP I SL V N+T+RTT DDL +F++ G+V DI+IP+DR T ESRGFAFVR
Sbjct: 9 PPDISDTYSLLVLNVTFRTTADDLFPLFDKYGKVVDIFIPKDRRTGESRGFAFVR 63
>gi|449528821|ref|XP_004171401.1| PREDICTED: uncharacterized LOC101216322 [Cucumis sativus]
Length = 251
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/55 (58%), Positives = 41/55 (74%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
PP I SL V N+T+RTT DDL +F++ G+V D++IPRDR T +SRGFAFVR
Sbjct: 9 PPDIRDTYSLLVLNITFRTTADDLYPLFDKYGKVVDVFIPRDRRTGDSRGFAFVR 63
>gi|449450504|ref|XP_004143002.1| PREDICTED: uncharacterized protein LOC101216322 [Cucumis sativus]
Length = 257
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/55 (58%), Positives = 41/55 (74%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
PP I SL V N+T+RTT DDL +F++ G+V D++IPRDR T +SRGFAFVR
Sbjct: 9 PPDIRDTYSLLVLNITFRTTADDLYPLFDKYGKVVDVFIPRDRRTGDSRGFAFVR 63
>gi|356512057|ref|XP_003524737.1| PREDICTED: uncharacterized protein LOC100804370 [Glycine max]
Length = 267
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/55 (60%), Positives = 41/55 (74%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
PP I SL V N+T+RTT DDL +F++ G+V DI+IP+DR T ESRGFAFVR
Sbjct: 9 PPDISDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPKDRRTGESRGFAFVR 63
>gi|118484490|gb|ABK94120.1| unknown [Populus trichocarpa]
Length = 302
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/55 (60%), Positives = 41/55 (74%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
PP I SL V N+T+RTT DDL +F++ G+V D++IPRDR T ESRGFAFVR
Sbjct: 9 PPDIRDTFSLLVLNITFRTTADDLFPLFDKYGKVVDVFIPRDRRTGESRGFAFVR 63
>gi|356524836|ref|XP_003531034.1| PREDICTED: uncharacterized protein LOC100778928 [Glycine max]
Length = 267
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/55 (60%), Positives = 41/55 (74%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
PP I SL V N+T+RTT DDL +F++ G+V DI+IP+DR T ESRGFAFVR
Sbjct: 9 PPDISDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPKDRRTGESRGFAFVR 63
>gi|448878216|gb|AGE46071.1| arginine/serine-rich splicing factor SC30 transcript X [Zea mays]
Length = 136
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/61 (55%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
Query: 2 SYGRP-PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+GR PP I SL V N+++RTT DDL +FER G+V D++ PRDR T +SRGFAFV
Sbjct: 3 HFGRSGPPDIRDTFSLLVLNISFRTTADDLFPLFERYGKVVDVFTPRDRRTGDSRGFAFV 62
Query: 61 R 61
R
Sbjct: 63 R 63
>gi|218201347|gb|EEC83774.1| hypothetical protein OsI_29668 [Oryza sativa Indica Group]
gi|222640763|gb|EEE68895.1| hypothetical protein OsJ_27729 [Oryza sativa Japonica Group]
Length = 298
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/55 (58%), Positives = 41/55 (74%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
PP I SL V N+++RTT DDL +F+R G+V D++IPRDR T +SRGFAFVR
Sbjct: 9 PPDIRDTFSLLVLNISFRTTADDLFPLFDRYGKVVDVFIPRDRRTGDSRGFAFVR 63
>gi|297797433|ref|XP_002866601.1| hypothetical protein ARALYDRAFT_496619 [Arabidopsis lyrata subsp.
lyrata]
gi|297312436|gb|EFH42860.1| hypothetical protein ARALYDRAFT_496619 [Arabidopsis lyrata subsp.
lyrata]
Length = 305
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/55 (58%), Positives = 40/55 (72%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
PP I SL V N+T+RTT DDL +F + G+V D++IPRDR T +SRGFAFVR
Sbjct: 9 PPDISDTYSLLVLNITFRTTADDLYPLFAKYGKVVDVFIPRDRRTGDSRGFAFVR 63
>gi|115476996|ref|NP_001062094.1| Os08g0486200 [Oryza sativa Japonica Group]
gi|42408182|dbj|BAD09319.1| putative splicing factor, arginine/serine-rich [Oryza sativa
Japonica Group]
gi|113624063|dbj|BAF24008.1| Os08g0486200 [Oryza sativa Japonica Group]
gi|215693774|dbj|BAG88973.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737273|dbj|BAG96202.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 289
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/55 (58%), Positives = 41/55 (74%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
PP I SL V N+++RTT DDL +F+R G+V D++IPRDR T +SRGFAFVR
Sbjct: 9 PPDIRDTFSLLVLNISFRTTADDLFPLFDRYGKVVDVFIPRDRRTGDSRGFAFVR 63
>gi|357148211|ref|XP_003574673.1| PREDICTED: uncharacterized protein LOC100824108 [Brachypodium
distachyon]
Length = 283
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/55 (58%), Positives = 41/55 (74%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
PP I SL V N+++RTT DDL +F+R G+V D++IPRDR T +SRGFAFVR
Sbjct: 9 PPDIRDTFSLLVLNISFRTTADDLYPLFDRYGKVVDVFIPRDRRTGDSRGFAFVR 63
>gi|15237641|ref|NP_201225.1| splicing factor, arginine/serine-rich 2 [Arabidopsis thaliana]
gi|30697964|ref|NP_851261.1| splicing factor, arginine/serine-rich 2 [Arabidopsis thaliana]
gi|9759396|dbj|BAB09851.1| unnamed protein product [Arabidopsis thaliana]
gi|17380868|gb|AAL36246.1| unknown protein [Arabidopsis thaliana]
gi|21689657|gb|AAM67450.1| unknown protein [Arabidopsis thaliana]
gi|22022546|gb|AAM83231.1| AT5g64200/MSJ1_4 [Arabidopsis thaliana]
gi|23505861|gb|AAN28790.1| At5g64200/MSJ1_4 [Arabidopsis thaliana]
gi|332010470|gb|AED97853.1| splicing factor, arginine/serine-rich 2 [Arabidopsis thaliana]
gi|332010471|gb|AED97854.1| splicing factor, arginine/serine-rich 2 [Arabidopsis thaliana]
Length = 303
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/55 (58%), Positives = 40/55 (72%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
PP I SL V N+T+RTT DDL +F + G+V D++IPRDR T +SRGFAFVR
Sbjct: 9 PPDISDTYSLLVLNITFRTTADDLYPLFAKYGKVVDVFIPRDRRTGDSRGFAFVR 63
>gi|9843653|emb|CAC03600.1| splicing factor SC35 [Arabidopsis thaliana]
Length = 303
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/55 (58%), Positives = 40/55 (72%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
PP I SL V N+T+RTT DDL +F + G+V D++IPRDR T +SRGFAFVR
Sbjct: 9 PPDISDTYSLLVLNITFRTTADDLYPLFAKYGKVVDVFIPRDRRTGDSRGFAFVR 63
>gi|308804285|ref|XP_003079455.1| RSP4_CAEEL Probable splicing factor, arginine/serine-rich 4 (ISS)
[Ostreococcus tauri]
gi|116057910|emb|CAL54113.1| RSP4_CAEEL Probable splicing factor, arginine/serine-rich 4 (ISS)
[Ostreococcus tauri]
Length = 100
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 37/55 (67%)
Query: 5 RPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAF 59
R P + +VS+K+DNL+Y +DLR F R GE+GD+Y+P DR TR RGF F
Sbjct: 43 RERPDVNDLVSVKIDNLSYDAREEDLREAFSRYGEIGDVYVPLDRETRRPRGFCF 97
>gi|116790938|gb|ABK25797.1| unknown [Picea sitchensis]
Length = 300
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/55 (58%), Positives = 41/55 (74%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
PP I SL V N+T+RT+ DDL +F+R G+V DI+IPRD+ T +SRGFAFVR
Sbjct: 9 PPDIRDTYSLLVLNITFRTSADDLFPLFDRYGKVVDIFIPRDKRTGDSRGFAFVR 63
>gi|255581357|ref|XP_002531488.1| serine/arginine rich splicing factor, putative [Ricinus communis]
gi|223528897|gb|EEF30895.1| serine/arginine rich splicing factor, putative [Ricinus communis]
Length = 257
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/55 (60%), Positives = 41/55 (74%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
PP I SL V N+T+RTT DDL +F++ G+V DI+IPRDR T +SRGFAFVR
Sbjct: 9 PPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVR 63
>gi|78191396|gb|ABB29919.1| unknown [Solanum tuberosum]
Length = 258
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/55 (58%), Positives = 42/55 (76%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
PP I+ SL V N+T+RTT DDL +F++ G+V D++IPRDR T +SRGFAFVR
Sbjct: 9 PPDIKDTYSLLVLNVTFRTTADDLFPLFDKYGKVVDVFIPRDRRTGDSRGFAFVR 63
>gi|225459316|ref|XP_002285794.1| PREDICTED: uncharacterized protein LOC100243776 [Vitis vinifera]
gi|302141951|emb|CBI19154.3| unnamed protein product [Vitis vinifera]
Length = 257
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/55 (58%), Positives = 41/55 (74%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
PP I SL V N+T+RTT DDL +F++ G+V D++IPRDR T +SRGFAFVR
Sbjct: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFDKYGKVVDVFIPRDRRTGDSRGFAFVR 63
>gi|448878316|gb|AGE46121.1| arginine/serine-rich splicing factor SC30 transcript II [Sorghum
bicolor]
Length = 188
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/53 (60%), Positives = 39/53 (73%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAF 59
PP I SL V N+T+RTT DDL +F++ GE+ DIYIPRDR T +SRGFAF
Sbjct: 9 PPPIRDTYSLLVLNITFRTTADDLFPLFDKYGEIVDIYIPRDRRTGDSRGFAF 61
>gi|388505176|gb|AFK40654.1| unknown [Medicago truncatula]
Length = 267
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/55 (60%), Positives = 40/55 (72%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
PP I SL V N+T+RTT D L +F++ G+V DI+IPRDR T ESRGFAFVR
Sbjct: 9 PPDIADTYSLLVLNITFRTTADGLFPLFDKYGKVVDIFIPRDRRTGESRGFAFVR 63
>gi|242035597|ref|XP_002465193.1| hypothetical protein SORBIDRAFT_01g033710 [Sorghum bicolor]
gi|241919047|gb|EER92191.1| hypothetical protein SORBIDRAFT_01g033710 [Sorghum bicolor]
Length = 216
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 39/54 (72%)
Query: 8 PRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
P SL V N+++RTT DDL +F+R GEV DI+IPRDR T ESRGFAFVR
Sbjct: 10 PENRDTFSLLVLNVSFRTTADDLFPLFDRYGEVVDIHIPRDRRTGESRGFAFVR 63
>gi|148909922|gb|ABR18047.1| unknown [Picea sitchensis]
Length = 267
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/55 (58%), Positives = 40/55 (72%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
PP I SL V N+T+RT+ DDL +F+R G+V DI+IPRDR T +SRGFAF R
Sbjct: 9 PPDIRDTYSLLVLNITFRTSADDLFPLFDRYGKVVDIFIPRDRRTGDSRGFAFFR 63
>gi|392355653|ref|XP_003752097.1| PREDICTED: uncharacterized protein LOC317533 [Rattus norvegicus]
Length = 213
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/51 (47%), Positives = 36/51 (70%)
Query: 10 IEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
++GM LKV+NL Y T+ L+ +FE G VGD+++PR+ T E+ GFAF+
Sbjct: 10 VDGMTCLKVENLAYHTSSYTLKLIFEDYGAVGDVFVPRNHLTEENYGFAFI 60
>gi|412988955|emb|CCO15546.1| Splicing factor, arginine/serine-rich 2 [Bathycoccus prasinos]
Length = 296
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 40/57 (70%)
Query: 5 RPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
+ PP I + S+K+DNL++ T +++ +F GE+GD+Y+PR+ T+ RGFAFVR
Sbjct: 49 KGPPDISNLHSVKIDNLSFDLTQEEITDMFASYGEIGDVYVPRNHHTQRMRGFAFVR 105
>gi|392343172|ref|XP_003754816.1| PREDICTED: uncharacterized protein LOC317533 [Rattus norvegicus]
gi|392355651|ref|XP_003752096.1| PREDICTED: uncharacterized protein LOC317533 [Rattus norvegicus]
Length = 829
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/51 (47%), Positives = 36/51 (70%)
Query: 10 IEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
++GM LKV+NL Y T+ L+ +FE G VGD+++PR+ T E+ GFAF+
Sbjct: 10 VDGMTCLKVENLAYHTSSYTLKLIFEDYGAVGDVFVPRNHLTEENYGFAFI 60
>gi|348688880|gb|EGZ28694.1| hypothetical protein PHYSODRAFT_537360 [Phytophthora sojae]
Length = 460
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 38/49 (77%)
Query: 12 GMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
G +SL V N++ R P+D+R+ FER GEV D+YIP+D +T+E +GFAFV
Sbjct: 230 GGISLLVRNISRRLRPEDIRKEFERYGEVRDVYIPKDYYTKEPKGFAFV 278
>gi|148697220|gb|EDL29167.1| RIKEN cDNA 4930595M18 [Mus musculus]
Length = 794
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 25/51 (49%), Positives = 35/51 (68%)
Query: 10 IEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
++GM LKV+NL + T+ L+ VFE G +GD+YIPR+ T E GFAF+
Sbjct: 10 VDGMTCLKVENLAHHTSSYTLKHVFEDYGPLGDVYIPRNHLTEEHYGFAFI 60
>gi|320165916|gb|EFW42815.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 113
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 36/54 (66%), Gaps = 4/54 (7%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
PPR +L V NLTY PDD+R +F +CG V DIY+PRD ++ + RGF +V
Sbjct: 59 PPR----ATLHVRNLTYDARPDDIREIFAKCGNVKDIYLPRDYYSNKLRGFGYV 108
>gi|301118214|ref|XP_002906835.1| splicing factor, arginine/serine-rich, putative [Phytophthora
infestans T30-4]
gi|262108184|gb|EEY66236.1| splicing factor, arginine/serine-rich, putative [Phytophthora
infestans T30-4]
Length = 233
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 38/49 (77%)
Query: 12 GMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
G +SL V N++ R P+D+R+ FER GEV D+YIP+D +T+E +GFAFV
Sbjct: 5 GGISLLVRNISRRLRPEDIRKEFERYGEVRDVYIPKDFYTKEPKGFAFV 53
>gi|83286039|ref|XP_729987.1| dentin phosphoryn [Plasmodium yoelii yoelii 17XNL]
gi|23489341|gb|EAA21552.1| dentin phosphoryn [Plasmodium yoelii yoelii]
Length = 793
Score = 58.9 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 36/51 (70%)
Query: 10 IEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+E SL + NL++ T+PD +R++FE G++ D+Y+P D +TR RGF FV
Sbjct: 2 VENGCSLLIRNLSFETSPDKVRKIFEHFGKIRDVYLPLDHYTRRPRGFGFV 52
>gi|26325758|dbj|BAC26633.1| unnamed protein product [Mus musculus]
Length = 829
Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 25/51 (49%), Positives = 35/51 (68%)
Query: 10 IEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
++GM LKV+NL + T+ L+ VFE G +GD+YIPR+ T E GFAF+
Sbjct: 10 VDGMTCLKVENLAHHTSSYTLKHVFEDYGPLGDVYIPRNHLTEEHYGFAFI 60
>gi|262118195|ref|NP_775611.2| uncharacterized protein LOC245492 [Mus musculus]
gi|124297553|gb|AAI31911.1| RIKEN cDNA 4930595M18 gene [Mus musculus]
gi|124376274|gb|AAI32592.1| RIKEN cDNA 4930595M18 gene [Mus musculus]
Length = 829
Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 25/51 (49%), Positives = 35/51 (68%)
Query: 10 IEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
++GM LKV+NL + T+ L+ VFE G +GD+YIPR+ T E GFAF+
Sbjct: 10 VDGMTCLKVENLAHHTSSYTLKHVFEDYGPLGDVYIPRNHLTEEHYGFAFI 60
>gi|300122958|emb|CBK23965.2| unnamed protein product [Blastocystis hominis]
Length = 173
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 37/61 (60%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
M RPP + + S+++DNL T +DL FE+ G++ DIYIPR+ +RGF FV
Sbjct: 1 MDNTRPPTDVNSLFSVRIDNLPNDATKEDLNNHFEKYGKIADIYIPRNTHDGGNRGFGFV 60
Query: 61 R 61
R
Sbjct: 61 R 61
>gi|294946599|ref|XP_002785125.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239898581|gb|EER16921.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 114
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 36/53 (67%)
Query: 9 RIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
++ + S+KVD + R DDLR F + GE+GD++IP DR+T SRGF FVR
Sbjct: 5 QLNDLFSIKVDGIDERVRKDDLREAFSKFGEIGDVFIPLDRYTGVSRGFGFVR 57
>gi|294942803|ref|XP_002783687.1| serine/arginine rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
gi|239896223|gb|EER15483.1| serine/arginine rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
Length = 691
Score = 57.8 bits (138), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 36/53 (67%)
Query: 9 RIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
++ + S+KVD + R DDLR F + GE+GD++IP DR+T SRGF FVR
Sbjct: 506 QLNDLFSVKVDGIDERVRKDDLREAFSKFGEIGDVFIPVDRYTGVSRGFGFVR 558
>gi|294921861|ref|XP_002778742.1| serine/arginine rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
gi|239887462|gb|EER10537.1| serine/arginine rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
Length = 840
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 36/53 (67%)
Query: 9 RIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
++ + S+KVD + R DDLR F + GE+GD++IP DR+T SRGF FVR
Sbjct: 748 QLNDLFSVKVDGIDERVRKDDLREAFSKFGEIGDVFIPVDRYTGVSRGFGFVR 800
>gi|124804262|ref|XP_001347950.1| conserved Plasmodium protein [Plasmodium falciparum 3D7]
gi|23496204|gb|AAN35863.1| conserved Plasmodium protein [Plasmodium falciparum 3D7]
Length = 914
Score = 57.8 bits (138), Expect = 9e-07, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 36/51 (70%)
Query: 10 IEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
++ S+ + NL Y T+PD +R++FE G+V D+Y+P D +TR+ RGF FV
Sbjct: 2 VDSGCSILIRNLNYDTSPDKVRKIFENVGKVKDVYLPLDHYTRKPRGFGFV 52
>gi|294868078|ref|XP_002765370.1| serine/arginine rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
gi|239865389|gb|EEQ98087.1| serine/arginine rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
Length = 204
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 36/53 (67%)
Query: 9 RIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
++ + S+KVD + R DDLR F + GE+GD++IP DR+T SRGF FVR
Sbjct: 5 QLNDLFSIKVDGIDERVRKDDLREAFSKFGEIGDVFIPLDRYTGVSRGFGFVR 57
>gi|449662790|ref|XP_004205613.1| PREDICTED: serine/arginine-rich splicing factor 12-like [Hydra
magnipapillata]
Length = 73
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 37/47 (78%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
S+ V N+ + P+DLRRVFE+ G++ D+Y+P D +TRESRGFA+++
Sbjct: 11 SVFVRNVHHDVRPEDLRRVFEKYGDISDVYVPLDYYTRESRGFAYIQ 57
>gi|323448916|gb|EGB04809.1| hypothetical protein AURANDRAFT_17068, partial [Aureococcus
anophagefferens]
Length = 112
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 37/56 (66%)
Query: 5 RPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
R R E VS+ V NLT++ + +DLR FE+ G V D+YIP D TRE RGFAF+
Sbjct: 4 RSESRREEGVSVLVRNLTFKLSKEDLREEFEKFGSVKDVYIPLDYMTREPRGFAFI 59
>gi|326437616|gb|EGD83186.1| hypothetical protein PTSG_03817 [Salpingoeca sp. ATCC 50818]
Length = 204
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 37/54 (68%)
Query: 8 PRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
P + + S+KVDN+ T +DLR F+ GE+GDIY+PR R T + RG+AFVR
Sbjct: 7 PDVSNLFSVKVDNIDRSTREEDLREAFKEFGEIGDIYMPRYRDTMDPRGYAFVR 60
>gi|324520554|gb|ADY47664.1| Serine/arginine-rich splicing factor 12 [Ascaris suum]
Length = 183
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 38/61 (62%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MS R R + +L V + Y P+DLR +FER G V D+YIP D +T ESRGFA+V
Sbjct: 1 MSRKRACCRADEGTTLYVRQVHYAARPEDLRTLFERMGPVRDVYIPLDYYTHESRGFAYV 60
Query: 61 R 61
+
Sbjct: 61 K 61
>gi|393906773|gb|EFO27553.2| hypothetical protein LOAG_00933 [Loa loa]
Length = 344
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 34/47 (72%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
+L V + Y PDDLR +FER G V D+YIP D +TRESRGFA+V+
Sbjct: 15 TLYVRQVHYSARPDDLRALFERMGPVRDVYIPLDYYTRESRGFAYVK 61
>gi|402593936|gb|EJW87863.1| hypothetical protein WUBG_01225 [Wuchereria bancrofti]
Length = 103
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 40/61 (65%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MS R R + + +L V + Y PDDLR +FE+ G V D+YIP D +TRESRGFA+V
Sbjct: 1 MSGRRGSYRDDEIPTLYVRQVHYSARPDDLRALFEQMGPVRDVYIPLDYYTRESRGFAYV 60
Query: 61 R 61
+
Sbjct: 61 K 61
>gi|170585176|ref|XP_001897362.1| RNA recognition motif domain containing protein [Brugia malayi]
gi|158595237|gb|EDP33806.1| RNA recognition motif domain containing protein [Brugia malayi]
Length = 340
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 40/61 (65%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MS R R + + +L V + Y PDDLR +FE+ G V D+YIP D +TRESRGFA+V
Sbjct: 1 MSGRRGSYRDDEIPTLYVRQVHYSARPDDLRALFEQMGPVRDVYIPLDYYTRESRGFAYV 60
Query: 61 R 61
+
Sbjct: 61 K 61
>gi|156086728|ref|XP_001610772.1| Ser/Arg-rich splicing factor [Babesia bovis T2Bo]
gi|154798025|gb|EDO07204.1| Ser/Arg-rich splicing factor, putative [Babesia bovis]
Length = 188
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 32/47 (68%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
SL V NL Y T+PD LR F R GE+ D+Y+P D +TR+ RGF FV
Sbjct: 12 ASLLVRNLKYETSPDQLRAAFSRFGEIRDVYLPLDYYTRKPRGFGFV 58
>gi|428673153|gb|EKX74066.1| serine/arginine rich splicing factor, putative [Babesia equi]
Length = 183
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 34/47 (72%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+SL V NL Y T+PD +R +F R GE+ D+Y+P D +T++ RGF FV
Sbjct: 13 ISLLVKNLKYETSPDKVRSLFSRYGEIRDVYLPLDYYTKKPRGFGFV 59
>gi|70942643|ref|XP_741463.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56519859|emb|CAH77253.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
Length = 254
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 36/51 (70%)
Query: 10 IEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+E SL + NL++ T+PD +R++FE G++ D+Y+P D +TR RGF FV
Sbjct: 2 VENGCSLLIRNLSFETSPDKVRKIFEHFGKIRDVYLPLDHYTRRPRGFGFV 52
>gi|226496531|ref|NP_001152123.1| splicing factor, arginine/serine-rich 2 [Zea mays]
gi|195652939|gb|ACG45937.1| splicing factor, arginine/serine-rich 2 [Zea mays]
Length = 161
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 36/47 (76%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
SL V N+++RTT DDL +F+R G+V DIYIPRD T + RGFAFVR
Sbjct: 17 SLLVLNVSFRTTADDLFPLFDRYGKVLDIYIPRDHRTGDPRGFAFVR 63
>gi|448878220|gb|AGE46073.1| arginine/serine-rich splicing factor SC26 transcript II [Zea
mays]
Length = 129
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 36/47 (76%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
SL V N+++RTT DDL +F+R G+V DIYIPRD T + RGFAFVR
Sbjct: 19 SLLVLNVSFRTTADDLFPLFDRYGKVLDIYIPRDHRTGDPRGFAFVR 65
>gi|449684562|ref|XP_002161704.2| PREDICTED: serine/arginine-rich splicing factor 12-like, partial
[Hydra magnipapillata]
Length = 131
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 37/59 (62%), Gaps = 5/59 (8%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
Y RPP SL + NL+ T DDLRR+F + G + DIYIP D +TRE RGF +V+
Sbjct: 6 YARPP-----NTSLYIRNLSSSTRSDDLRRMFAKYGPIRDIYIPLDYYTREPRGFCYVQ 59
>gi|326510839|dbj|BAJ91767.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 262
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 35/52 (67%)
Query: 9 RIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
R +G SL V N+ P+DLR FER G V D+Y+P+D +TRE RGFAFV
Sbjct: 32 REQGSGSLLVRNIPLSCRPEDLRVPFERFGPVRDVYLPKDYYTREPRGFAFV 83
>gi|325179763|emb|CCA14166.1| splicing factor putative [Albugo laibachii Nc14]
Length = 207
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 34/47 (72%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+SL + N++ R D+LR+ FE G+V D+YIPRD TRE +GFAFV
Sbjct: 7 ISLLIRNISRRMRSDELRKTFEEFGDVRDVYIPRDFHTREVKGFAFV 53
>gi|414867082|tpg|DAA45639.1| TPA: splicing factor, arginine/serine-rich 2 [Zea mays]
Length = 216
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 36/47 (76%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
SL V N+++RTT DDL +F+R G+V DIYIPRD T + RGFAFVR
Sbjct: 17 SLLVLNVSFRTTADDLFPLFDRYGKVLDIYIPRDHRTGDPRGFAFVR 63
>gi|91075992|ref|XP_970765.1| PREDICTED: similar to RNA binding motif protein 19 [Tribolium
castaneum]
gi|270014609|gb|EFA11057.1| hypothetical protein TcasGA2_TC004651 [Tribolium castaneum]
Length = 231
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 34/47 (72%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
++K+ NL Y+ +DL+++F G + DIY+PR R+T +RGFAFVR
Sbjct: 132 TVKITNLNYKIDEEDLKKIFSGIGPIADIYVPRLRYTHLNRGFAFVR 178
>gi|414867083|tpg|DAA45640.1| TPA: hypothetical protein ZEAMMB73_077445 [Zea mays]
gi|448878222|gb|AGE46074.1| arginine/serine-rich splicing factor SC26 transcript III [Zea
mays]
Length = 198
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 36/47 (76%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
SL V N+++RTT DDL +F+R G+V DIYIPRD T + RGFAFVR
Sbjct: 17 SLLVLNVSFRTTADDLFPLFDRYGKVLDIYIPRDHRTGDPRGFAFVR 63
>gi|221056270|ref|XP_002259273.1| RNA binding protein [Plasmodium knowlesi strain H]
gi|193809344|emb|CAQ40046.1| RNA binding protein, putative [Plasmodium knowlesi strain H]
Length = 946
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 36/51 (70%)
Query: 10 IEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+E SL + NL++ T+PD +R++F+ G+V D+Y+P D +TR RGF FV
Sbjct: 2 VENGCSLLIKNLSFHTSPDKIRKIFQSFGKVRDVYLPLDHYTRRPRGFGFV 52
>gi|448878218|gb|AGE46072.1| arginine/serine-rich splicing factor SC26 transcript I [Zea mays]
Length = 218
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 36/47 (76%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
S+ V N+++RTT DDL +F+R G+V DIYIPRD T + RGFAFVR
Sbjct: 19 SILVLNVSFRTTADDLFPLFDRYGKVLDIYIPRDHRTGDPRGFAFVR 65
>gi|226501776|ref|NP_001148421.1| LOC100282036 [Zea mays]
gi|195619182|gb|ACG31421.1| splicing factor, arginine/serine-rich 2 [Zea mays]
Length = 218
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 36/47 (76%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
S+ V N+++RTT DDL +F+R G+V DIYIPRD T + RGFAFVR
Sbjct: 19 SILVLNVSFRTTADDLFPLFDRYGKVLDIYIPRDHRTGDPRGFAFVR 65
>gi|401408831|ref|XP_003883864.1| CBR-RSP-4 protein, related [Neospora caninum Liverpool]
gi|325118281|emb|CBZ53832.1| CBR-RSP-4 protein, related [Neospora caninum Liverpool]
Length = 192
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 33/46 (71%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
SL + NL + T+PD +R++FE+ G V D+Y+P D FT+ RGF FV
Sbjct: 6 SLLIRNLCFETSPDRVRQIFEKFGRVRDVYLPLDHFTKRPRGFGFV 51
>gi|393906774|gb|EJD74392.1| hypothetical protein, variant [Loa loa]
Length = 324
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 29/35 (82%)
Query: 27 PDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
PDDLR +FER G V D+YIP D +TRESRGFA+V+
Sbjct: 7 PDDLRALFERMGPVRDVYIPLDYYTRESRGFAYVK 41
>gi|344248945|gb|EGW05049.1| E3 ubiquitin-protein ligase RLIM [Cricetulus griseus]
Length = 767
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/48 (52%), Positives = 31/48 (64%)
Query: 13 MVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
M SLKVDNL T+ L+R+FE G VGD+YI + T E GFAF+
Sbjct: 1 MTSLKVDNLANHTSSSTLKRLFEEYGPVGDVYIAPNHLTEERYGFAFI 48
>gi|255582554|ref|XP_002532060.1| serine/arginine rich splicing factor, putative [Ricinus communis]
gi|223528264|gb|EEF30315.1| serine/arginine rich splicing factor, putative [Ricinus communis]
Length = 246
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 33/48 (68%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
SL V NL + P+DLRR FE+ G + DIY+PRD +T E RGF FV+
Sbjct: 42 TSLLVRNLRHDCRPEDLRRPFEQFGALKDIYLPRDYYTGEPRGFGFVQ 89
>gi|298708752|emb|CBJ30714.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 270
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 36/49 (73%)
Query: 12 GMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
G VSL V NLT+RT DD++R+F G+V D+Y+P D T++ RGFAFV
Sbjct: 31 GKVSLLVRNLTFRTRVDDVKRIFTDFGDVRDVYLPLDFGTQKPRGFAFV 79
>gi|156407025|ref|XP_001641345.1| predicted protein [Nematostella vectensis]
gi|156228483|gb|EDO49282.1| predicted protein [Nematostella vectensis]
Length = 95
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 36/58 (62%), Gaps = 5/58 (8%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
Y RPP S+ V NL T PDDLRR+F + G + D+YIP D +TRE RGF ++
Sbjct: 4 YSRPPNS-----SIYVRNLHPDTRPDDLRRMFGKYGRITDVYIPLDYYTREPRGFCYI 56
>gi|237832865|ref|XP_002365730.1| RNA binding motif-containing protein [Toxoplasma gondii ME49]
gi|211963394|gb|EEA98589.1| RNA binding motif-containing protein [Toxoplasma gondii ME49]
Length = 208
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 33/47 (70%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
SL + NL + T+PD +R++FE+ G V D+Y+P D FT+ RGF FV
Sbjct: 5 CSLLIRNLCFETSPDRVRQIFEKFGRVRDVYLPLDHFTKRPRGFGFV 51
>gi|221488187|gb|EEE26401.1| hypothetical protein TGGT1_109290 [Toxoplasma gondii GT1]
gi|221508700|gb|EEE34269.1| conserved hypothetical protein [Toxoplasma gondii VEG]
Length = 208
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 33/47 (70%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
SL + NL + T+PD +R++FE+ G V D+Y+P D FT+ RGF FV
Sbjct: 5 CSLLIRNLCFETSPDRVRQIFEKFGRVRDVYLPLDHFTKRPRGFGFV 51
>gi|212723388|ref|NP_001131976.1| Splicing factor, arginine/serine-rich 2 [Zea mays]
gi|194693082|gb|ACF80625.1| unknown [Zea mays]
gi|195620736|gb|ACG32198.1| splicing factor, arginine/serine-rich 2 [Zea mays]
gi|413955616|gb|AFW88265.1| Splicing factor, arginine/serine-rich 2 [Zea mays]
gi|448878236|gb|AGE46081.1| arginine/serine-rich splicing factor SCL25A transcript I [Zea
mays]
Length = 216
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 32/48 (66%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
SL V NL PDDLRR F + G V DIY+P+D +TRE RGF F++
Sbjct: 39 TSLLVRNLRRDCRPDDLRRPFGKFGPVKDIYLPKDYYTREPRGFGFIQ 86
>gi|399217453|emb|CCF74340.1| unnamed protein product [Babesia microti strain RI]
Length = 203
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 36/56 (64%)
Query: 5 RPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
RP R +SL V NL Y TTP+ LR FE+ G + D+YIP + +T++ RGF FV
Sbjct: 26 RPSYRGGRTMSLLVRNLKYETTPEILREAFEKFGPIRDVYIPLEYYTKKPRGFGFV 81
>gi|414867727|tpg|DAA46284.1| TPA: hypothetical protein ZEAMMB73_663605 [Zea mays]
Length = 494
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 29/39 (74%)
Query: 23 YRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
Y T PDDLRR F + G V DIY+P+D +TRE RGF F++
Sbjct: 354 YYTRPDDLRRPFGKFGPVKDIYLPKDYYTREPRGFGFIQ 392
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/26 (61%), Positives = 20/26 (76%)
Query: 27 PDDLRRVFERCGEVGDIYIPRDRFTR 52
PDDLRR F + G V DIY+P+D +TR
Sbjct: 332 PDDLRRPFGKFGPVKDIYLPKDYYTR 357
>gi|449685942|ref|XP_002169071.2| PREDICTED: serine/arginine-rich splicing factor 10-like [Hydra
magnipapillata]
Length = 171
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 35/48 (72%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
S+ V N+ + +DLRR+FE+ G++ D+YIP D +TRE RGFA+V+
Sbjct: 10 TSVFVRNVHHDVRSEDLRRIFEKYGDISDVYIPLDYYTREPRGFAYVQ 57
>gi|452825437|gb|EME32434.1| RNA recognition motif (RRM)-containing protein [Galdieria
sulphuraria]
Length = 347
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 25/51 (49%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 11 EGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
EG L V NL+Y+ + DL RVF CG+V D+ IPR+ ++ RGFAF+R
Sbjct: 199 EGEKVLFVGNLSYKASEKDLFRVFSSCGQVFDVRIPRNH-SKVHRGFAFIR 248
>gi|159471227|ref|XP_001693758.1| predicted protein [Chlamydomonas reinhardtii]
gi|158283261|gb|EDP09012.1| predicted protein [Chlamydomonas reinhardtii]
Length = 86
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 33/46 (71%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
S+ V N+ T DDLR+ FE+ GE+ D+YIPRD +T+ SRGF F+
Sbjct: 1 SVLVRNIPLHMTVDDLRKKFEKFGELRDVYIPRDYYTQRSRGFGFI 46
>gi|126310597|ref|XP_001376489.1| PREDICTED: serine/arginine-rich splicing factor 12-like
[Monodelphis domestica]
Length = 257
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 37/59 (62%), Gaps = 5/59 (8%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
Y RPP SL V N+T T P+DLRR F R G + D+YIP D +TR RGFA+++
Sbjct: 4 YTRPP-----NTSLFVRNVTDATRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYIQ 57
>gi|326532152|dbj|BAK01452.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 208
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 32/48 (66%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
SL V NL PDDLRR F + G + D+YIPRD +T+E RGF FV+
Sbjct: 38 TSLLVRNLRRDCRPDDLRRPFAQFGRLKDVYIPRDYYTQEPRGFGFVQ 85
>gi|242072089|ref|XP_002451321.1| hypothetical protein SORBIDRAFT_05g027700 [Sorghum bicolor]
gi|241937164|gb|EES10309.1| hypothetical protein SORBIDRAFT_05g027700 [Sorghum bicolor]
Length = 270
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 32/50 (64%)
Query: 11 EGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
G VSL V N+ R P++LR FER G V D+Y+PRD T E RGF FV
Sbjct: 37 HGSVSLLVRNIPLRCRPEELRVPFERFGPVRDVYLPRDYHTGEPRGFGFV 86
>gi|448878332|gb|AGE46129.1| arginine/serine-rich splicing factor SCL31 [Sorghum bicolor]
Length = 270
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 32/50 (64%)
Query: 11 EGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
G VSL V N+ R P++LR FER G V D+Y+PRD T E RGF FV
Sbjct: 37 HGSVSLLVRNIPLRCRPEELRVPFERFGPVRDVYLPRDYHTGEPRGFGFV 86
>gi|194700364|gb|ACF84266.1| unknown [Zea mays]
Length = 267
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 32/50 (64%)
Query: 11 EGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
G VSL V N+ R P++LR FER G V D+Y+PRD T E RGF FV
Sbjct: 35 HGSVSLLVRNIPLRCRPEELRVPFERFGPVRDVYLPRDYHTGEPRGFGFV 84
>gi|194706612|gb|ACF87390.1| unknown [Zea mays]
Length = 269
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 32/50 (64%)
Query: 11 EGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
G VSL V N+ R P++LR FER G V D+Y+PRD T E RGF FV
Sbjct: 35 HGSVSLLVRNIPLRCRPEELRVPFERFGPVRDVYLPRDYHTGEPRGFGFV 84
>gi|260826177|ref|XP_002608042.1| hypothetical protein BRAFLDRAFT_213668 [Branchiostoma floridae]
gi|229293392|gb|EEN64052.1| hypothetical protein BRAFLDRAFT_213668 [Branchiostoma floridae]
Length = 111
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 36/59 (61%), Gaps = 5/59 (8%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
Y RPP SL V N+ T PD+LR +F + G + D+YIP D FTR RGFA+V+
Sbjct: 4 YSRPP-----NTSLYVRNVPDGTRPDELRSLFGKYGPIVDVYIPLDHFTRHPRGFAYVQ 57
>gi|242035637|ref|XP_002465213.1| hypothetical protein SORBIDRAFT_01g034200 [Sorghum bicolor]
gi|241919067|gb|EER92211.1| hypothetical protein SORBIDRAFT_01g034200 [Sorghum bicolor]
gi|448878340|gb|AGE46133.1| arginine/serine-rich splicing factor SCL25A transcript I [Sorghum
bicolor]
gi|448878342|gb|AGE46134.1| arginine/serine-rich splicing factor SCL25A transcript II
[Sorghum bicolor]
Length = 213
Score = 51.6 bits (122), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 32/48 (66%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
SL V NL PDDLRR F + G V DIY+P+D +TRE +GF F++
Sbjct: 37 TSLLVRNLRRDCRPDDLRRPFGKFGRVKDIYLPKDYYTREPKGFGFIQ 84
>gi|156098735|ref|XP_001615383.1| hypothetical protein [Plasmodium vivax Sal-1]
gi|148804257|gb|EDL45656.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 1057
Score = 51.6 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 35/51 (68%)
Query: 10 IEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+E SL + NL++ T+P+ +R++F+ G + D+Y+P D +TR RGF FV
Sbjct: 2 VENGCSLLIKNLSFHTSPEKIRKIFQSFGRIRDVYLPLDHYTRRPRGFGFV 52
>gi|303282859|ref|XP_003060721.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226458192|gb|EEH55490.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 93
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 32/47 (68%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
VSL V NL Y T +++R FE GEV D+YIP+D T+ +GFAFV
Sbjct: 1 VSLLVRNLPYDATVEEIRTAFEEYGEVRDVYIPKDYHTKRPKGFAFV 47
>gi|68065706|ref|XP_674837.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56493667|emb|CAH97904.1| conserved hypothetical protein [Plasmodium berghei]
Length = 245
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 10 IEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+E SL + NL++ TPD +R++FE G++ D+Y+P D +TR RGF FV
Sbjct: 2 VENGCSLLIRNLSF-ETPDKVRKIFEHFGKIRDVYLPLDHYTRRPRGFGFV 51
>gi|389583810|dbj|GAB66544.1| RNA binding protein [Plasmodium cynomolgi strain B]
Length = 1084
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 36/51 (70%)
Query: 10 IEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+E SL + NL++ T+P+ +R++F+ G++ D+Y+P D +TR RGF FV
Sbjct: 2 VENGCSLLIKNLSFHTSPEKIRKIFQSFGKIRDVYLPLDHYTRRPRGFGFV 52
>gi|302834399|ref|XP_002948762.1| hypothetical protein VOLCADRAFT_73973 [Volvox carteri f.
nagariensis]
gi|300265953|gb|EFJ50142.1| hypothetical protein VOLCADRAFT_73973 [Volvox carteri f.
nagariensis]
Length = 274
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 36/58 (62%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
YG + VS+ V N+ T +DLR FE+ GE+ D+YIPRD +T+ SRGF F+
Sbjct: 10 YGPASAGVRNKVSVLVRNIPLNYTAEDLRAKFEKFGELRDVYIPRDYYTQRSRGFGFI 67
>gi|440577321|emb|CCI55328.1| PH01B001I13.24 [Phyllostachys edulis]
Length = 196
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 36/56 (64%)
Query: 5 RPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
R PP + V+L ++ L++RTT + LR FER G++ ++ + DR + RGFAF+
Sbjct: 107 RSPPSLHAHVALFIEGLSFRTTEESLRSAFERFGQLTEVNLVMDRVAKRPRGFAFL 162
>gi|357112219|ref|XP_003557907.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E-like
[Brachypodium distachyon]
Length = 219
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 32/48 (66%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
SL V NL PDDLRR F + G + DIY+PRD +T+E RGF F++
Sbjct: 37 TSLLVRNLRRDCRPDDLRRPFGKFGRLKDIYLPRDYYTQEPRGFGFIQ 84
>gi|449442606|ref|XP_004139072.1| PREDICTED: serine/arginine-rich splicing factor 33-like [Cucumis
sativus]
gi|449528235|ref|XP_004171111.1| PREDICTED: serine/arginine-rich splicing factor 33-like [Cucumis
sativus]
Length = 285
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 33/48 (68%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
SL V NL++ P+DLRR F + G + DIY+P+D +T E RGF FV+
Sbjct: 36 TSLLVRNLSHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQ 83
>gi|209879626|ref|XP_002141253.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
gi|209556859|gb|EEA06904.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
Length = 266
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 10 IEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
IEG SL V NL + T+P +RR FER G V D+Y+P D +TR RGF FV
Sbjct: 83 IEG-CSLLVRNLRFETSPSRVRRHFERYGTVRDVYLPLDYYTRRPRGFGFV 132
>gi|8918490|dbj|BAA97656.1| RNA-binding protein [Candida boidinii]
Length = 255
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/46 (43%), Positives = 31/46 (67%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
S+ + NL Y TPD+L++ FE CG + I IP ++FT +GFA++
Sbjct: 125 SVYIGNLDYAATPDELQKHFESCGSINRITIPTNKFTGNPKGFAYI 170
>gi|158340529|ref|YP_001521523.1| RNA-binding protein [Acaryochloris marina MBIC11017]
gi|158310770|gb|ABW32384.1| RNA-binding protein [Acaryochloris marina MBIC11017]
Length = 91
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 33/47 (70%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+S+ V NL+Y +DLR +F GEV ++++P+DR T + RGFAFV
Sbjct: 1 MSIYVGNLSYEVAQEDLRAIFSEYGEVTNVHLPKDRETGKLRGFAFV 47
>gi|328865472|gb|EGG13858.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 868
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/45 (46%), Positives = 34/45 (75%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
L + NL+Y TT DD+++ FE G++ ++YIP DR +++S+G AFV
Sbjct: 326 LFIRNLSYTTTEDDIKKFFEAHGKLSEVYIPIDRDSKKSKGIAFV 370
>gi|357121831|ref|XP_003562621.1| PREDICTED: probable RNA-binding protein 19-like [Brachypodium
distachyon]
Length = 205
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 31/47 (65%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
SL V NL P+DLRR F + G + D+YIPRD +TRE RGF FV
Sbjct: 38 TSLLVRNLRRDCRPEDLRRPFGQFGRLKDVYIPRDYYTREPRGFGFV 84
>gi|226492712|ref|NP_001150206.1| LOC100283836 [Zea mays]
gi|195637558|gb|ACG38247.1| SR repressor protein [Zea mays]
Length = 258
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 33/52 (63%)
Query: 9 RIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
R EG SL V N+ +DLR FER G V D+YIP+D ++ E RGFAFV
Sbjct: 33 RKEGSGSLLVRNIPLSVRAEDLRVPFERFGPVRDVYIPKDYYSGEPRGFAFV 84
>gi|449541007|gb|EMD31994.1| hypothetical protein CERSUDRAFT_119299 [Ceriporiopsis subvermispora
B]
Length = 291
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 2 SYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
S GRP + M +L+V N++ T +DLR +F R G V +Y+ RDR T +GFAFV
Sbjct: 197 SMGRPGGSRDDMPTLRVTNISEDTQENDLRELFSRFGRVARVYVGRDRETGAGKGFAFV 255
>gi|448878226|gb|AGE46076.1| arginine/serine-rich splicing factor SCL30 transcript II [Zea
mays]
Length = 259
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 33/52 (63%)
Query: 9 RIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
R EG SL V N+ +DLR FER G V D+YIP+D ++ E RGFAFV
Sbjct: 33 RKEGSGSLLVRNIPLSVRAEDLRVPFERFGPVRDVYIPKDYYSGEPRGFAFV 84
>gi|194699092|gb|ACF83630.1| unknown [Zea mays]
gi|448878224|gb|AGE46075.1| arginine/serine-rich splicing factor SCL30 transcript I [Zea
mays]
Length = 258
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 33/52 (63%)
Query: 9 RIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
R EG SL V N+ +DLR FER G V D+YIP+D ++ E RGFAFV
Sbjct: 33 RKEGSGSLLVRNIPLSVRAEDLRVPFERFGPVRDVYIPKDYYSGEPRGFAFV 84
>gi|380018594|ref|XP_003693212.1| PREDICTED: probable RNA-binding protein 19-like [Apis florea]
Length = 900
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 19/43 (44%), Positives = 32/43 (74%)
Query: 18 VDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+ NL+Y TT DD+R++FE+ G + ++ +P DR TR+S+GF +
Sbjct: 370 IRNLSYTTTEDDIRKLFEKYGPLTEVNLPIDRITRKSKGFGTI 412
>gi|47209886|emb|CAF94406.1| unnamed protein product [Tetraodon nigroviridis]
Length = 98
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 38/59 (64%), Gaps = 5/59 (8%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
Y RPP SL V N++ + P+DLRR F R G + D+YIP D +TR+ RGFA+++
Sbjct: 4 YMRPP-----NTSLFVRNISDESRPEDLRREFGRYGPIVDVYIPLDFYTRQPRGFAYIQ 57
>gi|363543465|ref|NP_001241742.1| SR repressor protein [Zea mays]
gi|195625068|gb|ACG34364.1| SR repressor protein [Zea mays]
Length = 269
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 31/50 (62%)
Query: 11 EGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
G VSL V N+ R P++LR FER G V D Y+PRD T E RGF FV
Sbjct: 35 HGSVSLLVRNIPLRCRPEELRVPFERFGPVRDFYLPRDYHTGEPRGFGFV 84
>gi|297478612|ref|XP_002690241.1| PREDICTED: uncharacterized protein LOC787762 [Bos taurus]
gi|296484064|tpg|DAA26179.1| TPA: serine-arginine repressor protein (35kDa) (SRrp35)-like [Bos
taurus]
Length = 268
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 36/59 (61%), Gaps = 5/59 (8%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
Y RPP SL V N+ T P+DLRR F R G + D+YIP D +TR RGFA+V+
Sbjct: 4 YTRPP-----NTSLFVRNVADATRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQ 57
>gi|108708411|gb|ABF96206.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
Length = 218
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 31/48 (64%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
SL V NL PDDLRR F + G V DIY+PRD +T E RGF F++
Sbjct: 37 TSLLVRNLRRDCRPDDLRRPFGKFGRVKDIYLPRDYYTGEPRGFGFIQ 84
>gi|31249706|gb|AAP46199.1| putative splicing factor [Oryza sativa Japonica Group]
gi|108708412|gb|ABF96207.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|218192921|gb|EEC75348.1| hypothetical protein OsI_11773 [Oryza sativa Indica Group]
gi|222625002|gb|EEE59134.1| hypothetical protein OsJ_11026 [Oryza sativa Japonica Group]
Length = 217
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 31/48 (64%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
SL V NL PDDLRR F + G V DIY+PRD +T E RGF F++
Sbjct: 37 TSLLVRNLRRDCRPDDLRRPFGKFGRVKDIYLPRDYYTGEPRGFGFIQ 84
>gi|297722159|ref|NP_001173443.1| Os03g0374575 [Oryza sativa Japonica Group]
gi|255674538|dbj|BAH92171.1| Os03g0374575 [Oryza sativa Japonica Group]
Length = 251
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 31/48 (64%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
SL V NL PDDLRR F + G V DIY+PRD +T E RGF F++
Sbjct: 44 TSLLVRNLRRDCRPDDLRRPFGKFGRVKDIYLPRDYYTGEPRGFGFIQ 91
>gi|258546236|ref|ZP_05706470.1| RNA-binding protein [Cardiobacterium hominis ATCC 15826]
gi|258518502|gb|EEV87361.1| RNA-binding protein [Cardiobacterium hominis ATCC 15826]
Length = 102
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 33/48 (68%)
Query: 13 MVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
M+++ V NL+Y+ T +LR +F GEVG++ I +DR + S+GF FV
Sbjct: 1 MINIYVGNLSYQATEQELREMFASHGEVGNVTIIKDRDSGRSKGFGFV 48
>gi|359487440|ref|XP_002267230.2| PREDICTED: uncharacterized protein LOC100259677 [Vitis vinifera]
Length = 225
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 32/48 (66%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
SL V NL + P+DLRR F + G + DIY+PRD +T E RGF FV+
Sbjct: 36 TSLLVRNLRHDCRPEDLRRPFGQFGPLKDIYLPRDYYTGEPRGFGFVQ 83
>gi|410910852|ref|XP_003968904.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Takifugu
rubripes]
Length = 238
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 38/59 (64%), Gaps = 5/59 (8%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
Y RPP SL V N++ + P+DLRR F R G + D+YIP D +TR+ RGFA+++
Sbjct: 4 YMRPP-----NTSLFVRNISDESRPEDLRREFGRYGPIVDVYIPLDFYTRQPRGFAYIQ 57
>gi|449707231|gb|EMD46930.1| RNA recognition domain containing protein [Entamoeba histolytica
KU27]
Length = 685
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/43 (41%), Positives = 31/43 (72%)
Query: 18 VDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+ NL + T DD+R+ F+R G + +I++P D+ T++S+GF FV
Sbjct: 191 ITNLPFNCTEDDIRKEFDRFGNIAEIHLPIDKITKKSKGFGFV 233
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 33/52 (63%), Gaps = 2/52 (3%)
Query: 11 EGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIP--RDRFTRESRGFAFV 60
EG +L V N++++T D +R+VFE+CG V I + +D+ ++ GF FV
Sbjct: 501 EGSKTLYVKNISFKTKEDVIRKVFEKCGRVLAITLSKTKDKKVEKNSGFGFV 552
>gi|407039238|gb|EKE39532.1| RNA recognition motif domain containing protein [Entamoeba nuttalli
P19]
Length = 697
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/43 (41%), Positives = 31/43 (72%)
Query: 18 VDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+ NL + T DD+R+ F+R G + +I++P D+ T++S+GF FV
Sbjct: 190 ITNLPFNCTEDDIRKEFDRFGNIAEIHLPIDKITKKSKGFGFV 232
Score = 42.0 bits (97), Expect = 0.043, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 33/52 (63%), Gaps = 2/52 (3%)
Query: 11 EGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIP--RDRFTRESRGFAFV 60
EG +L V N++++T D +R+VFE+CG V + + +D+ ++ GF FV
Sbjct: 513 EGSKTLYVKNISFKTKEDVIRKVFEKCGRVLAVTLSKTKDKKVEKNSGFGFV 564
>gi|67479353|ref|XP_655058.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|56472162|gb|EAL49670.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
Length = 685
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/43 (41%), Positives = 31/43 (72%)
Query: 18 VDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+ NL + T DD+R+ F+R G + +I++P D+ T++S+GF FV
Sbjct: 191 ITNLPFNCTEDDIRKEFDRFGNIAEIHLPIDKITKKSKGFGFV 233
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 33/52 (63%), Gaps = 2/52 (3%)
Query: 11 EGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIP--RDRFTRESRGFAFV 60
EG +L V N++++T D +R+VFE+CG V I + +D+ ++ GF FV
Sbjct: 501 EGSKTLYVKNISFKTKEDVIRKVFEKCGRVLAITLSKTKDKKVEKNSGFGFV 552
>gi|281201992|gb|EFA76199.1| RNA-binding region RNP-1 domain-containing protein [Polysphondylium
pallidum PN500]
Length = 874
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/45 (46%), Positives = 33/45 (73%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
L + NL Y T DDL+++FE G++ +IYIP DR +++S+G AF+
Sbjct: 328 LFIRNLAYTVTEDDLKKLFEPFGKLSEIYIPIDRNSKKSKGIAFL 372
>gi|388503430|gb|AFK39781.1| unknown [Medicago truncatula]
Length = 336
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 30/47 (63%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
L V NL P+DLR FER G V D+Y+PR+ +T E RGF FV+
Sbjct: 49 GLLVRNLPLDARPEDLRGPFERYGPVKDVYLPRNYYTGEPRGFGFVK 95
>gi|167382576|ref|XP_001736171.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165901525|gb|EDR27604.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 697
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/43 (41%), Positives = 31/43 (72%)
Query: 18 VDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+ NL + T DD+R+ F+R G + +I++P D+ T++S+GF FV
Sbjct: 190 ITNLPFNCTEDDIRKEFDRFGNIAEIHLPIDKITKKSKGFGFV 232
Score = 42.4 bits (98), Expect = 0.032, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 33/52 (63%), Gaps = 2/52 (3%)
Query: 11 EGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIP--RDRFTRESRGFAFV 60
EG +L + NL+++T D +R+VFE+CG V + + +D+ ++ GF FV
Sbjct: 513 EGSKTLYIKNLSFKTKEDVIRKVFEKCGRVLAVTLSKTKDKKVEKNSGFGFV 564
>gi|307219223|ref|NP_001182527.1| splicing factor, arginine/serine-rich 13B [Sus scrofa]
Length = 261
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 36/59 (61%), Gaps = 5/59 (8%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
Y RPP SL V N+ T P+DLRR F R G + D+YIP D +TR RGFA+V+
Sbjct: 4 YTRPP-----NTSLFVRNVADATRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQ 57
>gi|224112763|ref|XP_002316285.1| predicted protein [Populus trichocarpa]
gi|222865325|gb|EEF02456.1| predicted protein [Populus trichocarpa]
Length = 232
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 32/47 (68%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
SL V N+ PD+LR FER G V D+YIP+D +T E RGFAFV+
Sbjct: 7 SLLVRNIPLDCRPDELRGPFERFGVVRDVYIPKDYYTGEPRGFAFVQ 53
>gi|194685575|ref|XP_001788719.1| PREDICTED: serine/arginine-rich splicing factor 12, partial [Bos
taurus]
Length = 145
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 36/59 (61%), Gaps = 5/59 (8%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
Y RPP SL V N+ T P+DLRR F R G + D+YIP D +TR RGFA+V+
Sbjct: 4 YTRPP-----NTSLFVRNVADATRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQ 57
>gi|383763833|ref|YP_005442815.1| putative RNA-binding region [Caldilinea aerophila DSM 14535 =
NBRC 104270]
gi|381384101|dbj|BAM00918.1| putative RNA-binding region [Caldilinea aerophila DSM 14535 =
NBRC 104270]
Length = 105
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 32/47 (68%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+++ V NL+YRTT D+LRR FE G V I RDR + +S+GF FV
Sbjct: 1 MNIYVGNLSYRTTEDELRRTFEAYGAVSSASIIRDRESGQSKGFGFV 47
>gi|348519627|ref|XP_003447331.1| PREDICTED: serine/arginine-rich splicing factor 10-like
[Oreochromis niloticus]
Length = 240
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 38/59 (64%), Gaps = 5/59 (8%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
Y RPP SL V N++ + P+DLRR F R G + D+YIP D +TR+ RGFA+++
Sbjct: 4 YMRPP-----NTSLFVRNISDESRPEDLRREFGRYGPIVDVYIPLDFYTRQPRGFAYIQ 57
>gi|387018626|gb|AFJ51431.1| Serine/arginine-rich splicing factor 12-like [Crotalus
adamanteus]
Length = 234
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 36/59 (61%), Gaps = 5/59 (8%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
Y RPP SL V N+ T P+DLRR F R G V D+YIP D +TR RGFA+++
Sbjct: 4 YTRPP-----NTSLFVRNVADATRPEDLRREFGRYGPVVDVYIPLDFYTRRPRGFAYIQ 57
>gi|296198765|ref|XP_002746858.1| PREDICTED: serine/arginine-rich splicing factor 12 [Callithrix
jacchus]
Length = 268
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 36/59 (61%), Gaps = 5/59 (8%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
Y RPP SL + N+ T P+DLRR F R G + D+YIP D +TR RGFA+V+
Sbjct: 4 YTRPP-----NTSLFIRNVADATRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQ 57
>gi|114608450|ref|XP_518634.2| PREDICTED: serine/arginine-rich splicing factor 12 [Pan
troglodytes]
Length = 268
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 36/59 (61%), Gaps = 5/59 (8%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
Y RPP SL + N+ T P+DLRR F R G + D+YIP D +TR RGFA+V+
Sbjct: 4 YTRPP-----NTSLFIRNVADATRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQ 57
>gi|307133716|ref|NP_001182514.1| splicing factor, arginine/serine-rich 13B [Macaca mulatta]
gi|402867628|ref|XP_003897943.1| PREDICTED: serine/arginine-rich splicing factor 12 [Papio anubis]
Length = 267
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 36/59 (61%), Gaps = 5/59 (8%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
Y RPP SL + N+ T P+DLRR F R G + D+YIP D +TR RGFA+V+
Sbjct: 4 YTRPP-----NTSLFIRNVADATRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQ 57
>gi|297678669|ref|XP_002817185.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 12 [Pongo abelii]
Length = 261
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 36/59 (61%), Gaps = 5/59 (8%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
Y RPP SL + N+ T P+DLRR F R G + D+YIP D +TR RGFA+V+
Sbjct: 4 YTRPP-----NTSLFIRNVADATRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQ 57
>gi|383415877|gb|AFH31152.1| serine/arginine-rich splicing factor 12 [Macaca mulatta]
Length = 261
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 36/59 (61%), Gaps = 5/59 (8%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
Y RPP SL + N+ T P+DLRR F R G + D+YIP D +TR RGFA+V+
Sbjct: 4 YTRPP-----NTSLFIRNVADATRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQ 57
>gi|148612890|ref|NP_542781.3| serine/arginine-rich splicing factor 12 [Homo sapiens]
gi|47606193|sp|Q8WXF0.1|SRS12_HUMAN RecName: Full=Serine/arginine-rich splicing factor 12; AltName:
Full=35 kDa SR repressor protein; Short=SRrp35;
AltName: Full=Splicing factor, arginine/serine-rich
13B; AltName: Full=Splicing factor,
arginine/serine-rich 19
gi|18034491|gb|AAL57515.1|AF449428_1 SRrp35 [Homo sapiens]
gi|189054199|dbj|BAG36719.1| unnamed protein product [Homo sapiens]
gi|261859278|dbj|BAI46161.1| 35 kDa SR repressor protein [synthetic construct]
gi|380809714|gb|AFE76732.1| serine/arginine-rich splicing factor 12 [Macaca mulatta]
gi|384945376|gb|AFI36293.1| serine/arginine-rich splicing factor 12 [Macaca mulatta]
Length = 261
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 36/59 (61%), Gaps = 5/59 (8%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
Y RPP SL + N+ T P+DLRR F R G + D+YIP D +TR RGFA+V+
Sbjct: 4 YTRPP-----NTSLFIRNVADATRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQ 57
>gi|296086246|emb|CBI31687.3| unnamed protein product [Vitis vinifera]
Length = 353
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 32/47 (68%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
SL V N+ P+DLR FER G V D+Y+P+D +T E RGFAFV+
Sbjct: 118 SLLVRNIPLNCRPEDLRVPFERFGLVRDVYLPKDYYTGEPRGFAFVQ 164
>gi|18203864|gb|AAH21715.1| Serine-arginine repressor protein (35 kDa) [Homo sapiens]
gi|123982510|gb|ABM82996.1| serine-arginine repressor protein (35 kDa) [synthetic construct]
gi|123997175|gb|ABM86189.1| serine-arginine repressor protein (35 kDa) [synthetic construct]
Length = 261
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 36/59 (61%), Gaps = 5/59 (8%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
Y RPP SL + N+ T P+DLRR F R G + D+YIP D +TR RGFA+V+
Sbjct: 4 YTRPP-----NTSLFIRNVADATRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQ 57
>gi|448878202|gb|AGE46064.1| arginine/serine-rich splicing factor SC30 transcript III [Zea mays]
Length = 293
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/37 (67%), Positives = 30/37 (81%)
Query: 25 TTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
TT DDL +FER G+V D++IPRDR T +SRGFAFVR
Sbjct: 64 TTADDLFPLFERYGKVVDVFIPRDRRTGDSRGFAFVR 100
>gi|56118384|ref|NP_001007946.1| serine/arginine-rich splicing factor 12 [Xenopus (Silurana)
tropicalis]
gi|51513232|gb|AAH80452.1| serine-arginine repressor protein (35 kDa) [Xenopus (Silurana)
tropicalis]
gi|89272962|emb|CAJ83214.1| serine-arginine repressor protein (35 kDa) [Xenopus (Silurana)
tropicalis]
Length = 253
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 36/59 (61%), Gaps = 5/59 (8%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
Y RPP SL V N+ T P+DLRR F R G + D+Y+P D +TR RGFA+++
Sbjct: 4 YSRPP-----NTSLFVRNVADATRPEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYIQ 57
>gi|325191972|emb|CCA26441.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 248
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 15 SLKVDNLTYRTTPDDLRRVFER-CGEVGDIYIPRDRFTRESRGFAFV 60
SL V NL +TT DDLRR F R G++ D+YIP+D T E R FAFV
Sbjct: 144 SLLVRNLNPKTTGDDLRRAFSRRPGDIRDVYIPKDHSTNELRTFAFV 190
>gi|302817851|ref|XP_002990600.1| hypothetical protein SELMODRAFT_27868 [Selaginella moellendorffii]
gi|300141522|gb|EFJ08232.1| hypothetical protein SELMODRAFT_27868 [Selaginella moellendorffii]
Length = 157
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 4 GRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
PPP+ EG S+ V NL++ T DLR+ F+RC ++ + + D+ TRE +GF V
Sbjct: 71 AAPPPKTEGCTSVYVGNLSWDATEKDLRQFFKRC-KITSVRLALDKETREFKGFGHV 126
>gi|302770591|ref|XP_002968714.1| hypothetical protein SELMODRAFT_27867 [Selaginella moellendorffii]
gi|300163219|gb|EFJ29830.1| hypothetical protein SELMODRAFT_27867 [Selaginella moellendorffii]
Length = 157
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 4 GRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
PPP+ EG S+ V NL++ T DLR+ F+RC ++ + + D+ TRE +GF V
Sbjct: 71 AAPPPKTEGCTSVYVGNLSWDATEKDLRQFFKRC-KITSVRLALDKETREFKGFGHV 126
>gi|189218303|ref|YP_001938945.1| RNA-binding protein (RRM domain) [Methylacidiphilum infernorum
V4]
gi|189185161|gb|ACD82346.1| RNA-binding protein (RRM domain) [Methylacidiphilum infernorum
V4]
Length = 143
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 32/45 (71%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
L V NL +R + +DLR +FE+ G+V +I + D+ T +SRGFAFV
Sbjct: 49 LYVGNLPFRISENDLREIFEQYGQVNEINLIVDKMTGQSRGFAFV 93
>gi|356553015|ref|XP_003544854.1| PREDICTED: uncharacterized protein LOC100775883 isoform 1
[Glycine max]
gi|356553017|ref|XP_003544855.1| PREDICTED: uncharacterized protein LOC100775883 isoform 2
[Glycine max]
Length = 249
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 32/48 (66%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
SL V NL + P+DLRR F + G + DIY+P+D +T E RGF FV+
Sbjct: 41 TSLLVRNLRHDCRPEDLRRPFGQFGPLKDIYLPKDYYTGEPRGFGFVQ 88
>gi|225449547|ref|XP_002283722.1| PREDICTED: uncharacterized protein LOC100258210 [Vitis vinifera]
Length = 276
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 32/47 (68%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
SL V N+ P+DLR FER G V D+Y+P+D +T E RGFAFV+
Sbjct: 41 SLLVRNIPLNCRPEDLRVPFERFGLVRDVYLPKDYYTGEPRGFAFVQ 87
>gi|302834547|ref|XP_002948836.1| hypothetical protein VOLCADRAFT_120666 [Volvox carteri f.
nagariensis]
gi|300266027|gb|EFJ50216.1| hypothetical protein VOLCADRAFT_120666 [Volvox carteri f.
nagariensis]
Length = 262
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
VSL V NL +DLR FE+ GE+ D+YIPRD +T+ RGF FV
Sbjct: 17 VSLVVRNLPLDIRAEDLRSKFEKYGELKDVYIPRDYYTQRPRGFGFV 63
>gi|116793427|gb|ABK26743.1| unknown [Picea sitchensis]
Length = 252
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 32/48 (66%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
L V N++ P+DLR FER G V D+Y+P++ +TRE RGF FV+
Sbjct: 55 TGLLVRNISLDARPEDLRIPFERFGPVKDVYLPKNFYTREPRGFGFVK 102
>gi|255584869|ref|XP_002533150.1| serine/arginine rich splicing factor, putative [Ricinus communis]
gi|223527045|gb|EEF29231.1| serine/arginine rich splicing factor, putative [Ricinus communis]
Length = 265
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 32/47 (68%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
SL V N+ P++LR FER G V D+YIP+D +T E RGFAFV+
Sbjct: 44 SLLVRNIPLDCRPEELRAPFERFGVVRDVYIPKDYYTGEPRGFAFVQ 90
>gi|255644989|gb|ACU22994.1| unknown [Glycine max]
Length = 214
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 32/48 (66%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
SL V NL + P+DLRR F + G + DIY+P+D +T E RGF FV+
Sbjct: 41 TSLLVRNLRHDCRPEDLRRPFGQFGPLKDIYLPKDYYTGEPRGFGFVQ 88
>gi|208973274|ref|NP_001129183.1| 35 kDa SR repressor protein [Rattus norvegicus]
Length = 261
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 36/59 (61%), Gaps = 5/59 (8%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
Y RPP SL V N+ T P+DLRR F R G + D+YIP D ++R RGFA+V+
Sbjct: 4 YTRPP-----NTSLFVRNVADATRPEDLRREFGRYGPIVDVYIPLDFYSRRPRGFAYVQ 57
>gi|350578277|ref|XP_003480331.1| PREDICTED: serine/arginine-rich splicing factor 12-like [Sus
scrofa]
Length = 95
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 34/57 (59%), Gaps = 5/57 (8%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAF 59
Y RPP SL V N+ T P+DLRR F R G + D+YIP D +TR RGFA+
Sbjct: 4 YTRPPN-----TSLFVRNVADATRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAY 55
>gi|332024948|gb|EGI65135.1| Putative RNA-binding protein 19 [Acromyrmex echinatior]
Length = 862
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 19/43 (44%), Positives = 31/43 (72%)
Query: 18 VDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+ NLTY TT DD+R++FE+ G + ++ +P DR TR+ +GF +
Sbjct: 325 IRNLTYTTTEDDVRKLFEKYGPLSEVDLPIDRMTRKPKGFGTI 367
>gi|119486604|ref|ZP_01620654.1| RNA-binding region [Lyngbya sp. PCC 8106]
gi|119456221|gb|EAW37353.1| RNA-binding region [Lyngbya sp. PCC 8106]
Length = 100
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 30/48 (62%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
+S+ + NL Y T DDL+ VF G V ++IP DR T SRGFAFV
Sbjct: 1 MSVYIGNLAYEVTEDDLKSVFTDYGSVKRVHIPTDRETGRSRGFAFVE 48
>gi|253760757|ref|XP_002489004.1| hypothetical protein SORBIDRAFT_0514s002010 [Sorghum bicolor]
gi|241947359|gb|EES20504.1| hypothetical protein SORBIDRAFT_0514s002010 [Sorghum bicolor]
Length = 208
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 32/50 (64%)
Query: 11 EGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
EG SL V N+ ++LR FER G V D+YIP+D ++ E RGFAFV
Sbjct: 88 EGSGSLLVRNIPLSVRAEELRVPFERFGPVRDVYIPKDYYSGEPRGFAFV 137
>gi|449524006|ref|XP_004169014.1| PREDICTED: uncharacterized protein LOC101227075 [Cucumis sativus]
Length = 305
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 31/46 (67%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
SL V N+ P++LR FER G V D+YIP+D +T E RGFAFV
Sbjct: 54 SLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFV 99
>gi|449437540|ref|XP_004136550.1| PREDICTED: serine/arginine-rich splicing factor 33-like [Cucumis
sativus]
gi|449516345|ref|XP_004165207.1| PREDICTED: serine/arginine-rich splicing factor 33-like [Cucumis
sativus]
Length = 210
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 32/48 (66%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
SL V NL + P+DLR +F R G + DIY+PRD ++ E RGF FV+
Sbjct: 37 TSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGEPRGFGFVQ 84
>gi|406887994|gb|EKD34608.1| RNA recognition motif-containing protein, partial [uncultured
bacterium]
Length = 98
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 32/48 (66%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
+ L V NL+Y T DL+++FE G+VG I +D+++ +S+GF FV
Sbjct: 1 MKLYVGNLSYEVTEQDLQQMFEPFGQVGSANIIKDKYSGQSKGFGFVE 48
>gi|363807232|ref|NP_001242100.1| uncharacterized protein LOC100779321 [Glycine max]
gi|255635455|gb|ACU18080.1| unknown [Glycine max]
Length = 253
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 32/48 (66%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
SL V NL + P+DLRR F + G + DIY+P+D +T E RGF FV+
Sbjct: 41 TSLLVRNLRHDCRPEDLRRPFGQFGPLKDIYLPKDYYTGEPRGFGFVQ 88
>gi|449459926|ref|XP_004147697.1| PREDICTED: uncharacterized protein LOC101221788 [Cucumis sativus]
Length = 286
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 31/46 (67%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
SL V N+ P++LR FER G V D+YIP+D +T E RGFAFV
Sbjct: 52 SLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFV 97
>gi|297847894|ref|XP_002891828.1| hypothetical protein ARALYDRAFT_892527 [Arabidopsis lyrata subsp.
lyrata]
gi|297337670|gb|EFH68087.1| hypothetical protein ARALYDRAFT_892527 [Arabidopsis lyrata subsp.
lyrata]
Length = 289
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 32/48 (66%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
SL V NL + +DLR+ FE+ G V DIY+PRD +T + RGF FV+
Sbjct: 36 TSLLVRNLRHDCRQEDLRKSFEQFGPVKDIYLPRDYYTGDPRGFGFVQ 83
>gi|346469351|gb|AEO34520.1| hypothetical protein [Amblyomma maculatum]
Length = 204
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 36/59 (61%), Gaps = 5/59 (8%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
Y RPP SL + N+ T PDDLR +F + G + D+YIP D +TR RGFA+V+
Sbjct: 5 YSRPP-----NSSLFIRNVPDGTRPDDLRSLFGKYGPLTDVYIPVDYYTRRPRGFAYVQ 58
>gi|15231285|ref|NP_187966.1| SC35-like splicing factor 30A [Arabidopsis thaliana]
gi|13878011|gb|AAK44083.1|AF370268_1 putative serine/arginine-rich protein [Arabidopsis thaliana]
gi|11994559|dbj|BAB02599.1| unnamed protein product [Arabidopsis thaliana]
gi|17104623|gb|AAL34200.1| putative serine/arginine-rich protein [Arabidopsis thaliana]
gi|332641854|gb|AEE75375.1| SC35-like splicing factor 30A [Arabidopsis thaliana]
Length = 262
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 32/48 (66%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
SL V NL + +DLRR FE+ G V DIY+PRD +T + RGF F++
Sbjct: 37 TSLLVRNLRHDCRQEDLRRPFEQFGPVKDIYLPRDYYTGDPRGFGFIQ 84
>gi|15293081|gb|AAK93651.1| unknown protein [Arabidopsis thaliana]
Length = 263
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 32/48 (66%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
SL V NL + +DLR+ FE+ G V DIY+PRD +T + RGF FV+
Sbjct: 36 TSLLVRNLRHDCRQEDLRKSFEQFGPVKDIYLPRDYYTGDPRGFGFVQ 83
>gi|240254272|ref|NP_564685.4| SC35-like splicing factor 33 [Arabidopsis thaliana]
gi|75337149|sp|Q9SEU4.1|SR33_ARATH RecName: Full=Serine/arginine-rich splicing factor 33; AltName:
Full=SC35-like splicing factor 33; Short=At-SCL33;
Short=AtSCL33
gi|6572475|gb|AAF17288.1|AF099940_1 Serine/arginine-rich protein [Arabidopsis thaliana]
gi|9843659|emb|CAC03603.1| SC35-like splicing factor SCL33, 33 kD [Arabidopsis thaliana]
gi|56744214|gb|AAW28547.1| At1g55310 [Arabidopsis thaliana]
gi|332195101|gb|AEE33222.1| SC35-like splicing factor 33 [Arabidopsis thaliana]
Length = 287
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 32/48 (66%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
SL V NL + +DLR+ FE+ G V DIY+PRD +T + RGF FV+
Sbjct: 36 TSLLVRNLRHDCRQEDLRKSFEQFGPVKDIYLPRDYYTGDPRGFGFVQ 83
>gi|348526131|ref|XP_003450574.1| PREDICTED: serine/arginine-rich splicing factor 10-like
[Oreochromis niloticus]
Length = 257
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 27/59 (45%), Positives = 36/59 (61%), Gaps = 5/59 (8%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
Y RPP SL V N+ + P+DLRR F R G + D+YIP D +TR RGFA+++
Sbjct: 4 YLRPPN-----TSLFVRNIADESRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYIQ 57
>gi|240254274|ref|NP_001031195.4| SC35-like splicing factor 33 [Arabidopsis thaliana]
gi|332195102|gb|AEE33223.1| SC35-like splicing factor 33 [Arabidopsis thaliana]
Length = 220
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 32/48 (66%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
SL V NL + +DLR+ FE+ G V DIY+PRD +T + RGF FV+
Sbjct: 36 TSLLVRNLRHDCRQEDLRKSFEQFGPVKDIYLPRDYYTGDPRGFGFVQ 83
>gi|24214620|ref|NP_712101.1| RNA-binding protein [Leptospira interrogans serovar Lai str.
56601]
gi|45657838|ref|YP_001924.1| RNA-binding protein [Leptospira interrogans serovar Copenhageni
str. Fiocruz L1-130]
gi|116328465|ref|YP_798185.1| RNA-binding protein [Leptospira borgpetersenii serovar
Hardjo-bovis str. L550]
gi|116331197|ref|YP_800915.1| RNA-binding protein [Leptospira borgpetersenii serovar
Hardjo-bovis str. JB197]
gi|359685806|ref|ZP_09255807.1| RNA-binding protein [Leptospira santarosai str. 2000030832]
gi|359726906|ref|ZP_09265602.1| RNA-binding protein [Leptospira weilii str. 2006001855]
gi|386074008|ref|YP_005988325.1| RNA-binding protein [Leptospira interrogans serovar Lai str.
IPAV]
gi|398332637|ref|ZP_10517342.1| RNA-binding protein [Leptospira alexanderi serovar Manhao 3 str.
L 60]
gi|410450551|ref|ZP_11304588.1| hypothetical protein LEP1GSC068_2887 [Leptospira sp. Fiocruz
LV3954]
gi|417760452|ref|ZP_12408475.1| hypothetical protein LEP1GSC027_0555 [Leptospira interrogans str.
2002000624]
gi|417765544|ref|ZP_12413504.1| hypothetical protein LEP1GSC007_1775 [Leptospira interrogans
serovar Bulgarica str. Mallika]
gi|417775540|ref|ZP_12423393.1| hypothetical protein LEP1GSC025_3203 [Leptospira interrogans str.
2002000621]
gi|417781669|ref|ZP_12429418.1| hypothetical protein LEP1GSC036_2522 [Leptospira weilii str.
2006001853]
gi|417783687|ref|ZP_12431403.1| hypothetical protein LEP1GSC077_2793 [Leptospira interrogans str.
C10069]
gi|418668620|ref|ZP_13230020.1| hypothetical protein LEP1GSC019_3521 [Leptospira interrogans
serovar Pyrogenes str. 2006006960]
gi|418672853|ref|ZP_13234186.1| hypothetical protein LEP1GSC026_0628 [Leptospira interrogans str.
2002000623]
gi|418684012|ref|ZP_13245203.1| hypothetical protein LEP1GSC045_1894 [Leptospira interrogans
serovar Pomona str. Kennewicki LC82-25]
gi|418693004|ref|ZP_13254073.1| hypothetical protein LEP1GSC080_1903 [Leptospira interrogans str.
FPW2026]
gi|418696158|ref|ZP_13257167.1| hypothetical protein LEP1GSC081_1448 [Leptospira kirschneri str.
H1]
gi|418699596|ref|ZP_13260554.1| hypothetical protein LEP1GSC087_2628 [Leptospira interrogans
serovar Bataviae str. L1111]
gi|418704274|ref|ZP_13265152.1| hypothetical protein LEP1GSC096_2774 [Leptospira interrogans
serovar Hebdomadis str. R499]
gi|418710854|ref|ZP_13271620.1| hypothetical protein LEP1GSC097_1099 [Leptospira interrogans
serovar Grippotyphosa str. UI 08368]
gi|418716814|ref|ZP_13276777.1| hypothetical protein LEP1GSC099_0521 [Leptospira interrogans str.
UI 08452]
gi|418719262|ref|ZP_13278462.1| hypothetical protein LEP1GSC101_3790 [Leptospira borgpetersenii
str. UI 09149]
gi|418726301|ref|ZP_13284912.1| hypothetical protein LEP1GSC104_2204 [Leptospira interrogans str.
UI 12621]
gi|418734639|ref|ZP_13291080.1| hypothetical protein LEP1GSC105_1904 [Leptospira interrogans str.
UI 12758]
gi|418739027|ref|ZP_13295420.1| hypothetical protein LEP1GSC121_3280 [Leptospira borgpetersenii
serovar Castellonis str. 200801910]
gi|418744825|ref|ZP_13301171.1| hypothetical protein LEP1GSC163_4293 [Leptospira santarosai str.
CBC379]
gi|418755775|ref|ZP_13311971.1| hypothetical protein LEP1GSC179_0669 [Leptospira santarosai str.
MOR084]
gi|421084617|ref|ZP_15545475.1| hypothetical protein LEP1GSC173_1895 [Leptospira santarosai str.
HAI1594]
gi|421094388|ref|ZP_15555106.1| hypothetical protein LEP1GSC128_0728 [Leptospira borgpetersenii
str. 200801926]
gi|421100627|ref|ZP_15561250.1| hypothetical protein LEP1GSC125_1674 [Leptospira borgpetersenii
str. 200901122]
gi|421103448|ref|ZP_15564047.1| hypothetical protein LEP1GSC117_3375 [Leptospira interrogans
serovar Icterohaemorrhagiae str. Verdun LP]
gi|421113326|ref|ZP_15573770.1| hypothetical protein LEP1GSC071_0300 [Leptospira santarosai str.
JET]
gi|421118783|ref|ZP_15579118.1| hypothetical protein LEP1GSC069_1297 [Leptospira interrogans
serovar Canicola str. Fiocruz LV133]
gi|421119714|ref|ZP_15580032.1| hypothetical protein LEP1GSC057_2152 [Leptospira interrogans str.
Brem 329]
gi|421126199|ref|ZP_15586437.1| hypothetical protein LEP1GSC020_3724 [Leptospira interrogans
serovar Grippotyphosa str. 2006006986]
gi|421137268|ref|ZP_15597355.1| hypothetical protein LEP1GSC009_1749 [Leptospira interrogans
serovar Grippotyphosa str. Andaman]
gi|422004225|ref|ZP_16351446.1| RNA-binding protein [Leptospira santarosai serovar Shermani str.
LT 821]
gi|24195595|gb|AAN49119.1|AE011365_5 RNA-binding protein [Leptospira interrogans serovar Lai str.
56601]
gi|45601078|gb|AAS70561.1| RNA-binding protein [Leptospira interrogans serovar Copenhageni
str. Fiocruz L1-130]
gi|116121209|gb|ABJ79252.1| RNA-binding protein [Leptospira borgpetersenii serovar
Hardjo-bovis str. L550]
gi|116124886|gb|ABJ76157.1| RNA-binding protein [Leptospira borgpetersenii serovar
Hardjo-bovis str. JB197]
gi|353457797|gb|AER02342.1| RNA-binding protein [Leptospira interrogans serovar Lai str.
IPAV]
gi|400324233|gb|EJO76531.1| hypothetical protein LEP1GSC045_1894 [Leptospira interrogans
serovar Pomona str. Kennewicki LC82-25]
gi|400352243|gb|EJP04441.1| hypothetical protein LEP1GSC007_1775 [Leptospira interrogans
serovar Bulgarica str. Mallika]
gi|400357111|gb|EJP13258.1| hypothetical protein LEP1GSC080_1903 [Leptospira interrogans str.
FPW2026]
gi|409943682|gb|EKN89276.1| hypothetical protein LEP1GSC027_0555 [Leptospira interrogans str.
2002000624]
gi|409953074|gb|EKO07577.1| hypothetical protein LEP1GSC077_2793 [Leptospira interrogans str.
C10069]
gi|409955687|gb|EKO14619.1| hypothetical protein LEP1GSC081_1448 [Leptospira kirschneri str.
H1]
gi|409960211|gb|EKO23965.1| hypothetical protein LEP1GSC104_2204 [Leptospira interrogans str.
UI 12621]
gi|409963980|gb|EKO31880.1| hypothetical protein LEP1GSC179_0669 [Leptospira santarosai str.
MOR084]
gi|410009807|gb|EKO67963.1| hypothetical protein LEP1GSC069_1297 [Leptospira interrogans
serovar Canicola str. Fiocruz LV133]
gi|410015637|gb|EKO77732.1| hypothetical protein LEP1GSC068_2887 [Leptospira sp. Fiocruz
LV3954]
gi|410018482|gb|EKO85320.1| hypothetical protein LEP1GSC009_1749 [Leptospira interrogans
serovar Grippotyphosa str. Andaman]
gi|410347480|gb|EKO98377.1| hypothetical protein LEP1GSC057_2152 [Leptospira interrogans str.
Brem 329]
gi|410362810|gb|EKP13845.1| hypothetical protein LEP1GSC128_0728 [Leptospira borgpetersenii
str. 200801926]
gi|410366693|gb|EKP22082.1| hypothetical protein LEP1GSC117_3375 [Leptospira interrogans
serovar Icterohaemorrhagiae str. Verdun LP]
gi|410432901|gb|EKP77254.1| hypothetical protein LEP1GSC173_1895 [Leptospira santarosai str.
HAI1594]
gi|410436289|gb|EKP85407.1| hypothetical protein LEP1GSC020_3724 [Leptospira interrogans
serovar Grippotyphosa str. 2006006986]
gi|410574865|gb|EKQ37894.1| hypothetical protein LEP1GSC025_3203 [Leptospira interrogans str.
2002000621]
gi|410580163|gb|EKQ47991.1| hypothetical protein LEP1GSC026_0628 [Leptospira interrogans str.
2002000623]
gi|410744415|gb|EKQ93156.1| hypothetical protein LEP1GSC101_3790 [Leptospira borgpetersenii
str. UI 09149]
gi|410745725|gb|EKQ98635.1| hypothetical protein LEP1GSC121_3280 [Leptospira borgpetersenii
serovar Castellonis str. 200801910]
gi|410755352|gb|EKR16982.1| hypothetical protein LEP1GSC019_3521 [Leptospira interrogans
serovar Pyrogenes str. 2006006960]
gi|410761438|gb|EKR27618.1| hypothetical protein LEP1GSC087_2628 [Leptospira interrogans
serovar Bataviae str. L1111]
gi|410766007|gb|EKR36696.1| hypothetical protein LEP1GSC096_2774 [Leptospira interrogans
serovar Hebdomadis str. R499]
gi|410768454|gb|EKR43701.1| hypothetical protein LEP1GSC097_1099 [Leptospira interrogans
serovar Grippotyphosa str. UI 08368]
gi|410772759|gb|EKR52798.1| hypothetical protein LEP1GSC105_1904 [Leptospira interrogans str.
UI 12758]
gi|410778400|gb|EKR63029.1| hypothetical protein LEP1GSC036_2522 [Leptospira weilii str.
2006001853]
gi|410787585|gb|EKR81317.1| hypothetical protein LEP1GSC099_0521 [Leptospira interrogans str.
UI 08452]
gi|410794311|gb|EKR92220.1| hypothetical protein LEP1GSC163_4293 [Leptospira santarosai str.
CBC379]
gi|410796430|gb|EKR98566.1| hypothetical protein LEP1GSC125_1674 [Leptospira borgpetersenii
str. 200901122]
gi|410801100|gb|EKS07274.1| hypothetical protein LEP1GSC071_0300 [Leptospira santarosai str.
JET]
gi|417257025|gb|EKT86432.1| RNA-binding protein [Leptospira santarosai serovar Shermani str.
LT 821]
gi|455666044|gb|EMF31517.1| hypothetical protein LEP1GSC201_1675 [Leptospira interrogans
serovar Pomona str. Fox 32256]
gi|455791968|gb|EMF43753.1| hypothetical protein LEP1GSC067_3245 [Leptospira interrogans
serovar Lora str. TE 1992]
gi|456821541|gb|EMF70047.1| hypothetical protein LEP1GSC148_0536 [Leptospira interrogans
serovar Canicola str. LT1962]
gi|456861145|gb|EMF79850.1| hypothetical protein LEP1GSC188_1846 [Leptospira weilii serovar
Topaz str. LT2116]
gi|456874070|gb|EMF89395.1| hypothetical protein LEP1GSC005_1881 [Leptospira santarosai str.
ST188]
gi|456887997|gb|EMF99005.1| hypothetical protein LEP1GSC123_3441 [Leptospira borgpetersenii
str. 200701203]
Length = 91
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 31/47 (65%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+++ + NL Y+ T DDLR+ FE GEV + I D+ + +SRG AFV
Sbjct: 1 MNIYIGNLAYQATEDDLRKAFESFGEVTSVRIITDKLSGKSRGLAFV 47
>gi|12323160|gb|AAG51556.1|AC027034_2 unknown protein; 47745-45927 [Arabidopsis thaliana]
Length = 220
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 32/48 (66%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
SL V NL + +DLR+ FE+ G V DIY+PRD +T + RGF FV+
Sbjct: 36 TSLLVRNLRHDCRQEDLRKSFEQFGPVKDIYLPRDYYTGDPRGFGFVQ 83
>gi|302782525|ref|XP_002973036.1| hypothetical protein SELMODRAFT_8400 [Selaginella moellendorffii]
gi|302805506|ref|XP_002984504.1| hypothetical protein SELMODRAFT_8401 [Selaginella moellendorffii]
gi|300147892|gb|EFJ14554.1| hypothetical protein SELMODRAFT_8401 [Selaginella moellendorffii]
gi|300159637|gb|EFJ26257.1| hypothetical protein SELMODRAFT_8400 [Selaginella moellendorffii]
Length = 93
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 32/48 (66%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
SL V N++ T DDLR FER G V D+Y+P+D ++ E RGF FV+
Sbjct: 3 TSLLVRNISRDTRADDLRGPFERYGAVKDVYLPKDFYSGEPRGFGFVQ 50
>gi|9843661|emb|CAC03604.1| SC35-like splicing factor SCL30a, 30a kD [Arabidopsis thaliana]
Length = 261
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 32/48 (66%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
SL V NL + +DLRR FE+ G V DIY+PRD +T + RGF F++
Sbjct: 37 TSLLVRNLRHDCRQEDLRRPFEQFGPVKDIYLPRDYYTGDPRGFGFIQ 84
>gi|434398406|ref|YP_007132410.1| RNP-1 like RNA-binding protein [Stanieria cyanosphaera PCC 7437]
gi|428269503|gb|AFZ35444.1| RNP-1 like RNA-binding protein [Stanieria cyanosphaera PCC 7437]
Length = 106
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 31/47 (65%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+S+ + NL+Y+ T +DL VF G+V +Y+P DR T + RGF FV
Sbjct: 1 MSIYIGNLSYQVTQEDLNEVFAEYGKVKKVYLPTDRETGKMRGFGFV 47
>gi|388579351|gb|EIM19676.1| translation initiation factor 3, RNA-binding subunit [Wallemia sebi
CBS 633.66]
Length = 288
Score = 48.5 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 24/46 (52%), Positives = 32/46 (69%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+L+V N++ T DDLR +F R G V ++I RDR TR S+GFAFV
Sbjct: 208 TLRVTNVSEDTHEDDLRELFRRFGRVQRVFIGRDRETRASKGFAFV 253
>gi|158339748|ref|YP_001520755.1| RNA-binding protein [Acaryochloris marina MBIC11017]
gi|158340644|ref|YP_001521812.1| RNA-binding protein [Acaryochloris marina MBIC11017]
gi|158309989|gb|ABW31605.1| RNA-binding protein [Acaryochloris marina MBIC11017]
gi|158310885|gb|ABW32498.1| RNA-binding protein [Acaryochloris marina MBIC11017]
Length = 95
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 32/47 (68%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+S+ V NL+Y T D+++ VF G V ++++P+DR T RGFAFV
Sbjct: 1 MSIYVGNLSYDVTQDEIQAVFAEYGAVSNVHVPKDRETGRMRGFAFV 47
>gi|198438407|ref|XP_002126373.1| PREDICTED: similar to FUS interacting protein (serine-arginine
rich) 1 [Ciona intestinalis]
Length = 221
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 34/61 (55%), Gaps = 6/61 (9%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MS RP SL V N+ PDDLRR F R G V D+YIP D + R RGFA++
Sbjct: 1 MSRARP------NASLFVRNIADNIRPDDLRREFVRFGPVSDVYIPLDYYNRRPRGFAYI 54
Query: 61 R 61
+
Sbjct: 55 Q 55
>gi|218186222|gb|EEC68649.1| hypothetical protein OsI_37086 [Oryza sativa Indica Group]
Length = 773
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 32/49 (65%)
Query: 12 GMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
VSL V NLT P+D++ F++ G V D+Y+P+D T E RGFAFV
Sbjct: 329 AAVSLFVSNLTRSCRPEDVQVPFQKFGPVRDVYLPKDYNTGEPRGFAFV 377
>gi|398337153|ref|ZP_10521858.1| RNA-binding protein [Leptospira kmetyi serovar Malaysia str.
Bejo-Iso9]
gi|398339344|ref|ZP_10524047.1| RNA-binding protein [Leptospira kirschneri serovar Bim str. 1051]
gi|418679408|ref|ZP_13240671.1| hypothetical protein LEP1GSC044_2501 [Leptospira kirschneri
serovar Grippotyphosa str. RM52]
gi|418686673|ref|ZP_13247838.1| hypothetical protein LEP1GSC064_2382 [Leptospira kirschneri
serovar Grippotyphosa str. Moskva]
gi|418742090|ref|ZP_13298463.1| hypothetical protein LEP1GSC122_3008 [Leptospira kirschneri
serovar Valbuzzi str. 200702274]
gi|421090342|ref|ZP_15551136.1| hypothetical protein LEP1GSC131_0332 [Leptospira kirschneri str.
200802841]
gi|421107449|ref|ZP_15568001.1| hypothetical protein LEP1GSC082_3004 [Leptospira kirschneri str.
H2]
gi|421132619|ref|ZP_15592785.1| hypothetical protein LEP1GSC018_3276 [Leptospira kirschneri str.
2008720114]
gi|400320299|gb|EJO68170.1| hypothetical protein LEP1GSC044_2501 [Leptospira kirschneri
serovar Grippotyphosa str. RM52]
gi|410000920|gb|EKO51546.1| hypothetical protein LEP1GSC131_0332 [Leptospira kirschneri str.
200802841]
gi|410007465|gb|EKO61175.1| hypothetical protein LEP1GSC082_3004 [Leptospira kirschneri str.
H2]
gi|410356002|gb|EKP03377.1| hypothetical protein LEP1GSC018_3276 [Leptospira kirschneri str.
2008720114]
gi|410738744|gb|EKQ83477.1| hypothetical protein LEP1GSC064_2382 [Leptospira kirschneri
serovar Grippotyphosa str. Moskva]
gi|410750448|gb|EKR07428.1| hypothetical protein LEP1GSC122_3008 [Leptospira kirschneri
serovar Valbuzzi str. 200702274]
Length = 91
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 31/47 (65%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+++ + NL Y+ T DDLR+ FE GEV + I D+ + +SRG AFV
Sbjct: 1 MNIYIGNLAYQATEDDLRKAFESFGEVTSVRIITDKLSGKSRGLAFV 47
>gi|357478561|ref|XP_003609566.1| Splicing factor, arginine/serine-rich 13A [Medicago truncatula]
gi|355510621|gb|AES91763.1| Splicing factor, arginine/serine-rich 13A [Medicago truncatula]
Length = 192
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 30/46 (65%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
L V NL P+DLR FER G V D+Y+PR+ +T E RGF FV+
Sbjct: 50 LLVRNLPLDARPEDLRGPFERYGPVKDVYLPRNYYTGEPRGFGFVK 95
>gi|22298986|ref|NP_682233.1| RNA binding protein [Thermosynechococcus elongatus BP-1]
gi|22295168|dbj|BAC08995.1| RNA binding protein [Thermosynechococcus elongatus BP-1]
Length = 90
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 32/47 (68%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
++L + NL+Y T +DLR VFE+ G + I +P DR T + RGFAFV
Sbjct: 1 MTLYIGNLSYEATENDLREVFEKYGAIRRIVLPVDRETGKRRGFAFV 47
>gi|297834182|ref|XP_002884973.1| hypothetical protein ARALYDRAFT_478747 [Arabidopsis lyrata subsp.
lyrata]
gi|297330813|gb|EFH61232.1| hypothetical protein ARALYDRAFT_478747 [Arabidopsis lyrata subsp.
lyrata]
Length = 262
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 32/48 (66%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
SL V NL + +DLRR FE+ G V DIY+PRD +T + RGF F++
Sbjct: 37 TSLLVRNLRHDCRQEDLRRPFEQFGPVKDIYLPRDYYTGDPRGFGFIQ 84
>gi|119568946|gb|EAW48561.1| serine-arginine repressor protein (35 kDa), isoform CRA_a [Homo
sapiens]
Length = 262
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 35/58 (60%), Gaps = 5/58 (8%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
Y RPP SL + N+ T P+DLRR F R G + D+YIP D +TR RGFA++
Sbjct: 4 YTRPP-----NTSLFIRNVADATRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYL 56
>gi|156376506|ref|XP_001630401.1| predicted protein [Nematostella vectensis]
gi|156217421|gb|EDO38338.1| predicted protein [Nematostella vectensis]
Length = 215
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MS G P + ++ V NL Y T DL +VFER G+V + I RD+ TRESRG AF+
Sbjct: 1 MSGGLAPSK----STVYVGNLPYSLTNSDLHKVFERYGKVVKVTILRDKETRESRGVAFI 56
>gi|83643344|ref|YP_431779.1| RNA-binding protein [Hahella chejuensis KCTC 2396]
gi|83631387|gb|ABC27354.1| RNA-binding protein (RRM domain) [Hahella chejuensis KCTC 2396]
Length = 92
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 32/47 (68%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+++ V NL+Y+ T DDLR F G++ ++ I RDR T +S+GF FV
Sbjct: 1 MNIYVGNLSYQVTEDDLREAFAAYGDISNVNIIRDRDTGQSKGFGFV 47
>gi|444728903|gb|ELW69337.1| Serine/arginine-rich splicing factor 12 [Tupaia chinensis]
Length = 101
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 34/58 (58%), Gaps = 5/58 (8%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
Y RPP SL V N+ T P+DL R F R G + D+YIP D +TR RGFAF+
Sbjct: 9 YMRPPN-----TSLFVRNVADATRPEDLCREFGRYGPIVDVYIPLDFYTRHPRGFAFM 61
>gi|345870896|ref|ZP_08822845.1| RNP-1 like RNA-binding protein [Thiorhodococcus drewsii AZ1]
gi|343921050|gb|EGV31774.1| RNP-1 like RNA-binding protein [Thiorhodococcus drewsii AZ1]
Length = 90
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+++ V NL+Y TT DLR F GEV + + D+FT +S+GF FV
Sbjct: 1 MNIYVGNLSYNTTDSDLREAFAPFGEVAQVNLISDKFTGQSKGFGFV 47
>gi|434395314|ref|YP_007130261.1| RNP-1 like RNA-binding protein [Gloeocapsa sp. PCC 7428]
gi|428267155|gb|AFZ33101.1| RNP-1 like RNA-binding protein [Gloeocapsa sp. PCC 7428]
Length = 96
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 30/47 (63%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+++ V NL+YR T DDLR VF G V I +P DR T RGFAFV
Sbjct: 1 MTIYVGNLSYRATEDDLRAVFAEYGTVKRIVLPTDRETGRMRGFAFV 47
>gi|406896127|gb|EKD40506.1| RNP-1 like protein RNA-binding protein, partial [uncultured
bacterium]
Length = 92
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 30/46 (65%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
L V NL+Y + DL+++FE G+VG I D+++ +S+GF FV
Sbjct: 3 LYVGNLSYEISESDLKQMFEEFGKVGSASIIMDKYSGQSKGFGFVE 48
>gi|222622536|gb|EEE56668.1| hypothetical protein OsJ_06104 [Oryza sativa Japonica Group]
Length = 304
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 32/50 (64%)
Query: 11 EGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+G SL V N+ +DLR FER G V D+Y+P+D +T E RGFAFV
Sbjct: 73 QGSGSLLVRNIPLSCRAEDLRVPFERFGPVRDVYLPKDYYTGEPRGFAFV 122
>gi|327261517|ref|XP_003215576.1| PREDICTED: serine/arginine-rich splicing factor 12-like [Anolis
carolinensis]
Length = 261
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 35/59 (59%), Gaps = 5/59 (8%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
Y RPP SL V N+ T P+DLR F R G V D+Y+P D +TR RGFA+++
Sbjct: 4 YTRPP-----NTSLFVRNVADATRPEDLRHEFGRYGPVVDVYVPLDFYTRRPRGFAYIQ 57
>gi|408398205|gb|EKJ77338.1| hypothetical protein FPSE_02416 [Fusarium pseudograminearum
CS3096]
Length = 128
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 29/48 (60%)
Query: 13 MVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
M L V NL++ TT D LR+ F GEV D I RDR T +RGF FV
Sbjct: 1 MSKLYVGNLSWNTTDDTLRQTFSEFGEVTDSIIMRDRETGRARGFGFV 48
>gi|428309319|ref|YP_007120296.1| RRM domain-containing RNA-binding protein [Microcoleus sp. PCC
7113]
gi|428250931|gb|AFZ16890.1| RRM domain-containing RNA-binding protein [Microcoleus sp. PCC
7113]
Length = 101
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 31/47 (65%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+S+ V NL+Y T +D+R VF G V ++ +P+DR T RGFAFV
Sbjct: 1 MSIYVGNLSYDVTEEDIREVFAEYGTVNNVTLPKDRETGRKRGFAFV 47
>gi|307180956|gb|EFN68744.1| Probable RNA-binding protein 19 [Camponotus floridanus]
Length = 903
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 19/43 (44%), Positives = 30/43 (69%)
Query: 18 VDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+ NLTY T DD+R++FE+ G + ++ +P DR TR+ +GF V
Sbjct: 366 IRNLTYTITEDDIRKLFEKYGPLSEVNLPVDRVTRKPKGFGTV 408
>gi|300113043|ref|YP_003759618.1| RNP-1 like RNA-binding protein [Nitrosococcus watsonii C-113]
gi|299538980|gb|ADJ27297.1| RNP-1 like RNA-binding protein [Nitrosococcus watsonii C-113]
Length = 118
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 31/48 (64%)
Query: 13 MVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+V++ V NL+Y+ T +DLR FE GEV + D+F+ S+GF FV
Sbjct: 17 IVNIYVGNLSYQVTDEDLRAAFENYGEVSSAKVIVDKFSNRSKGFGFV 64
>gi|77166221|ref|YP_344746.1| RNA-binding protein, RNP-1 [Nitrosococcus oceani ATCC 19707]
gi|254435869|ref|ZP_05049376.1| RNA-binding protein [Nitrosococcus oceani AFC27]
gi|76884535|gb|ABA59216.1| RNA-binding protein, RNP-1 [Nitrosococcus oceani ATCC 19707]
gi|207088980|gb|EDZ66252.1| RNA-binding protein [Nitrosococcus oceani AFC27]
Length = 119
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 31/48 (64%)
Query: 13 MVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+V++ V NL+Y+ T +DLR FE GEV + D+F+ S+GF FV
Sbjct: 17 IVNIYVGNLSYQVTDEDLRAAFENYGEVSSAKVIVDKFSNRSKGFGFV 64
>gi|242046420|ref|XP_002461081.1| hypothetical protein SORBIDRAFT_02g040350 [Sorghum bicolor]
gi|241924458|gb|EER97602.1| hypothetical protein SORBIDRAFT_02g040350 [Sorghum bicolor]
gi|448878346|gb|AGE46136.1| arginine/serine-rich splicing factor SCL25B transcript I [Sorghum
bicolor]
gi|448878348|gb|AGE46137.1| arginine/serine-rich splicing factor SCL25B transcript II
[Sorghum bicolor]
Length = 209
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 31/48 (64%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
SL V NL P+DLRR F + G + DIY+PRD +T E RGF FV+
Sbjct: 37 TSLLVRNLRRDCRPEDLRRPFGQFGRLKDIYLPRDYYTGEPRGFGFVQ 84
>gi|182412766|ref|YP_001817832.1| RNP-1 like RNA-binding protein [Opitutus terrae PB90-1]
gi|177839980|gb|ACB74232.1| RNP-1 like RNA-binding protein [Opitutus terrae PB90-1]
Length = 117
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 30/45 (66%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
L V NL+++TT ++LR F + G V D+Y+ D+ T RGFAFV
Sbjct: 6 LYVGNLSFKTTEEELRSAFGQFGSVTDVYVAMDKMTGRPRGFAFV 50
>gi|125586354|gb|EAZ27018.1| hypothetical protein OsJ_10948 [Oryza sativa Japonica Group]
Length = 254
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 35/55 (63%), Gaps = 3/55 (5%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
PP G++ V N++ P+D+R FE+ G V D+Y+PR+ TRE RGF FV+
Sbjct: 57 PPAPTGLL---VRNISLTARPEDIRIPFEQFGPVKDVYLPRNFHTRELRGFGFVK 108
>gi|30687014|ref|NP_197382.3| SC35-like splicing factor 28 [Arabidopsis thaliana]
gi|91806878|gb|ABE66166.1| 28 kDa SC35-like splicing factor [Arabidopsis thaliana]
gi|332005232|gb|AED92615.1| SC35-like splicing factor 28 [Arabidopsis thaliana]
Length = 236
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 31/50 (62%)
Query: 12 GMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
G L + NL P+DLR FER G + DIY+PR+ +T E RGF FV+
Sbjct: 45 GPSGLLIRNLPLDARPNDLRDSFERFGPLKDIYLPRNYYTGEPRGFGFVK 94
>gi|384916047|ref|ZP_10016247.1| RNA-binding protein (RRM domain) (fragment) [Methylacidiphilum
fumariolicum SolV]
gi|384526575|emb|CCG92118.1| RNA-binding protein (RRM domain) (fragment) [Methylacidiphilum
fumariolicum SolV]
Length = 99
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 32/45 (71%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
L V NL +R + +DLR +FE+ G+V +I + D+ T +SRGFAFV
Sbjct: 6 LYVGNLPFRISENDLRELFEQYGQVNEINLIVDKMTGQSRGFAFV 50
>gi|373854326|ref|ZP_09597124.1| RNP-1 like RNA-binding protein [Opitutaceae bacterium TAV5]
gi|391231688|ref|ZP_10267894.1| RRM domain-containing RNA-binding protein [Opitutaceae bacterium
TAV1]
gi|372472193|gb|EHP32205.1| RNP-1 like RNA-binding protein [Opitutaceae bacterium TAV5]
gi|391221349|gb|EIP99769.1| RRM domain-containing RNA-binding protein [Opitutaceae bacterium
TAV1]
Length = 122
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 30/45 (66%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
L V N++++T+ D+LR F + G V D+Y+ D+ T RGFAFV
Sbjct: 6 LYVGNMSFKTSEDELRSAFGQFGNVTDVYVAMDKMTGRPRGFAFV 50
>gi|146328793|ref|YP_001209360.1| RNA recognition motif-containing protein [Dichelobacter nodosus
VCS1703A]
gi|146232263|gb|ABQ13241.1| RNA recognition motif protein [Dichelobacter nodosus VCS1703A]
Length = 95
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 32/48 (66%)
Query: 13 MVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
M ++ V NL+YRTT D+LR F + G+V + I +DR + S+GF FV
Sbjct: 1 MTNIYVGNLSYRTTEDELRNAFSQFGDVQNASIIKDRDSGRSKGFGFV 48
>gi|116831499|gb|ABK28702.1| unknown [Arabidopsis thaliana]
Length = 237
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 31/50 (62%)
Query: 12 GMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
G L + NL P+DLR FER G + DIY+PR+ +T E RGF FV+
Sbjct: 45 GPSGLLIRNLPLDARPNDLRDSFERFGPLKDIYLPRNYYTGEPRGFGFVK 94
>gi|195631119|gb|ACG36660.1| splicing factor, arginine/serine-rich 4 [Zea mays]
gi|195642888|gb|ACG40912.1| splicing factor, arginine/serine-rich 4 [Zea mays]
gi|195645762|gb|ACG42349.1| splicing factor, arginine/serine-rich 4 [Zea mays]
Length = 209
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 31/48 (64%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
SL V NL P+DLRR F + G V DIY+PRD +T + RGF FV+
Sbjct: 37 TSLLVRNLRRDCRPEDLRRPFGQFGRVKDIYLPRDYYTGDPRGFGFVQ 84
>gi|218190416|gb|EEC72843.1| hypothetical protein OsI_06591 [Oryza sativa Indica Group]
Length = 289
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 32/50 (64%)
Query: 11 EGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+G SL V N+ +DLR FER G V D+Y+P+D +T E RGFAFV
Sbjct: 58 QGSGSLLVRNIPLSCRAEDLRVPFERFGPVRDVYLPKDYYTGEPRGFAFV 107
>gi|448878352|gb|AGE46139.1| arginine/serine-rich splicing factor SCL25B transcript IV
[Sorghum bicolor]
Length = 174
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 31/48 (64%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
SL V NL P+DLRR F + G + DIY+PRD +T E RGF FV+
Sbjct: 37 TSLLVRNLRRDCRPEDLRRPFGQFGRLKDIYLPRDYYTGEPRGFGFVQ 84
>gi|328791232|ref|XP_624611.3| PREDICTED: probable RNA-binding protein 19-like [Apis mellifera]
Length = 889
Score = 47.8 bits (112), Expect = 9e-04, Method: Composition-based stats.
Identities = 18/43 (41%), Positives = 31/43 (72%)
Query: 18 VDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+ NL+Y TT DD+R++FE+ G + ++ +P DR TR+ +GF +
Sbjct: 360 IRNLSYTTTEDDIRKLFEKYGPLTEVNLPIDRITRKLKGFGTI 402
>gi|115445337|ref|NP_001046448.1| Os02g0252100 [Oryza sativa Japonica Group]
gi|47497118|dbj|BAD19168.1| putative pre-mRNA splicing factor [Oryza sativa Japonica Group]
gi|47497696|dbj|BAD19762.1| putative pre-mRNA splicing factor [Oryza sativa Japonica Group]
gi|66394215|gb|AAG43284.2| pre-mRNA splicing factor [Oryza sativa]
gi|113535979|dbj|BAF08362.1| Os02g0252100 [Oryza sativa Japonica Group]
gi|215704460|dbj|BAG93894.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 265
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 32/50 (64%)
Query: 11 EGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+G SL V N+ +DLR FER G V D+Y+P+D +T E RGFAFV
Sbjct: 34 QGSGSLLVRNIPLSCRAEDLRVPFERFGPVRDVYLPKDYYTGEPRGFAFV 83
>gi|125543974|gb|EAY90113.1| hypothetical protein OsI_11679 [Oryza sativa Indica Group]
Length = 254
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 35/55 (63%), Gaps = 3/55 (5%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
PP G++ V N++ P+D+R FE+ G V D+Y+PR+ TRE RGF FV+
Sbjct: 57 PPAPTGLL---VRNISLTARPEDIRIPFEQFGPVKDVYLPRNFHTRELRGFGFVK 108
>gi|372863947|gb|AEX99749.1| putative serine/arginine-rich protein SCL subfamily member
[Saccharum hybrid cultivar]
Length = 209
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 31/48 (64%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
SL V NL P+DLRR F + G + DIY+PRD +T E RGF FV+
Sbjct: 37 TSLLVRNLRRDCRPEDLRRPFGQFGRLKDIYLPRDYYTGEPRGFGFVQ 84
>gi|222637522|gb|EEE67654.1| hypothetical protein OsJ_25252 [Oryza sativa Japonica Group]
Length = 388
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 31/48 (64%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
SL V NL P+DLRR F + G + DIYIPRD ++ E RGF FV+
Sbjct: 213 TSLLVRNLRRDCRPEDLRRPFGQFGRLKDIYIPRDYYSGEPRGFGFVQ 260
>gi|115473547|ref|NP_001060372.1| Os07g0633200 [Oryza sativa Japonica Group]
gi|33146902|dbj|BAC79901.1| putative SC35-like splicing factor SCL30a [Oryza sativa Japonica
Group]
gi|113611908|dbj|BAF22286.1| Os07g0633200 [Oryza sativa Japonica Group]
gi|215692446|dbj|BAG87866.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 213
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 31/48 (64%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
SL V NL P+DLRR F + G + DIYIPRD ++ E RGF FV+
Sbjct: 38 TSLLVRNLRRDCRPEDLRRPFGQFGRLKDIYIPRDYYSGEPRGFGFVQ 85
>gi|357160417|ref|XP_003578758.1| PREDICTED: uncharacterized protein LOC100826288 [Brachypodium
distachyon]
Length = 295
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 32/50 (64%)
Query: 11 EGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+G SL V N+ +DLR FER G V D+Y+P+D ++ E RGFAFV
Sbjct: 62 QGSGSLLVRNIPLSARAEDLRVPFERFGPVRDVYLPKDYYSGEPRGFAFV 111
>gi|194688600|gb|ACF78384.1| unknown [Zea mays]
gi|194700100|gb|ACF84134.1| unknown [Zea mays]
gi|219887871|gb|ACL54310.1| unknown [Zea mays]
gi|224035011|gb|ACN36581.1| unknown [Zea mays]
gi|238908719|gb|ACF81490.2| unknown [Zea mays]
gi|448878248|gb|AGE46087.1| arginine/serine-rich splicing factor SCL25B transcript IV [Zea
mays]
Length = 209
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 31/48 (64%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
SL V NL P+DLRR F + G V DIY+PRD +T + RGF FV+
Sbjct: 37 TSLLVRNLRRDCRPEDLRRPFGQFGRVKDIYLPRDYYTGDPRGFGFVQ 84
>gi|218200082|gb|EEC82509.1| hypothetical protein OsI_26989 [Oryza sativa Indica Group]
Length = 216
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 31/48 (64%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
SL V NL P+DLRR F + G + DIYIPRD ++ E RGF FV+
Sbjct: 41 TSLLVRNLRRDCRPEDLRRPFGQFGRLKDIYIPRDYYSGEPRGFGFVQ 88
>gi|213513443|ref|NP_001133450.1| FUS-interacting serine-arginine-rich protein 1 [Salmo salar]
gi|209154048|gb|ACI33256.1| FUS-interacting serine-arginine-rich protein 1 [Salmo salar]
Length = 271
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 37/59 (62%), Gaps = 5/59 (8%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
Y RPP SL + N++ + P+DLRR F R G V D+YIP D ++R RGFA+++
Sbjct: 4 YLRPP-----NTSLFIRNISDESRPEDLRREFGRYGPVVDVYIPLDFYSRRPRGFAYIQ 57
>gi|224002947|ref|XP_002291145.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220972921|gb|EED91252.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 324
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 31/47 (65%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
VSL V N+ + DL+ F R GEV D+YIPRD +++ +GFAF+
Sbjct: 189 VSLLVRNVNGEISTQDLQMAFGRIGEVRDVYIPRDFHSQQPKGFAFI 235
>gi|226493261|ref|NP_001151991.1| LOC100285628 [Zea mays]
gi|195651649|gb|ACG45292.1| splicing factor, arginine/serine-rich 4 [Zea mays]
gi|448878242|gb|AGE46084.1| arginine/serine-rich splicing factor SCL25B transcript I [Zea
mays]
gi|448878246|gb|AGE46086.1| arginine/serine-rich splicing factor SCL25B transcript III [Zea
mays]
gi|448878250|gb|AGE46088.1| arginine/serine-rich splicing factor SCL25B transcript V [Zea
mays]
gi|448878254|gb|AGE46090.1| arginine/serine-rich splicing factor SCL25B transcript VII [Zea
mays]
gi|448878256|gb|AGE46091.1| arginine/serine-rich splicing factor SCL25B transcript VIII [Zea
mays]
Length = 209
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 31/48 (64%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
SL V NL P+DLRR F + G V DIY+PRD +T + RGF FV+
Sbjct: 37 TSLLVRNLRRDCRPEDLRRPFGQFGRVKDIYLPRDYYTGDPRGFGFVQ 84
>gi|209527224|ref|ZP_03275736.1| RNP-1 like RNA-binding protein [Arthrospira maxima CS-328]
gi|376003288|ref|ZP_09781101.1| Glycine-rich RNA-binding protein, rbp-like [Arthrospira sp. PCC
8005]
gi|209492382|gb|EDZ92725.1| RNP-1 like RNA-binding protein [Arthrospira maxima CS-328]
gi|375328318|emb|CCE16854.1| Glycine-rich RNA-binding protein, rbp-like [Arthrospira sp. PCC
8005]
Length = 93
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 29/47 (61%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+S+ V NL+Y TPDDL VF + G V IP DR T SRGF FV
Sbjct: 1 MSIYVGNLSYDVTPDDLSEVFAQYGTVKRSMIPTDRETGRSRGFGFV 47
>gi|308272084|emb|CBX28692.1| Glycine-rich RNA-binding protein 8 [uncultured Desulfobacterium
sp.]
Length = 127
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 28/44 (63%)
Query: 18 VDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
V NL+Y DDLR+ FE+ G+V + I D+++ S+GF FV
Sbjct: 5 VGNLSYEVNEDDLRQAFEQLGKVDSVSIINDKYSGRSKGFGFVE 48
>gi|26452521|dbj|BAC43345.1| putative Serine/arginine rich protein [Arabidopsis thaliana]
Length = 236
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 31/50 (62%)
Query: 12 GMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
G L + NL P+DLR FER G + DIY+PR+ +T E RGF FV+
Sbjct: 45 GPSGLLIRNLPLDARPNDLRDSFERFGPLKDIYLPRNYYTGEPRGFGFVK 94
>gi|356499101|ref|XP_003518382.1| PREDICTED: uncharacterized protein LOC100804294 [Glycine max]
Length = 276
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 32/47 (68%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
SL V N+ P++LR FER G V D+YIP+D ++ E RGFAFV+
Sbjct: 48 SLLVRNIPLDCRPEELRVPFERFGPVRDVYIPKDYYSGEPRGFAFVQ 94
>gi|91202563|emb|CAJ72202.1| rna binding protein [Candidatus Kuenenia stuttgartiensis]
Length = 126
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 30/41 (73%)
Query: 20 NLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
NL +TT ++L++VFE G+V + I +D+F+ ESRGF FV
Sbjct: 7 NLARQTTEEELKQVFEEFGQVTSVTIIKDKFSGESRGFGFV 47
>gi|356553842|ref|XP_003545260.1| PREDICTED: uncharacterized protein LOC100792397 [Glycine max]
Length = 271
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 32/47 (68%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
SL V N+ P++LR FER G V D+YIP+D ++ E RGFAFV+
Sbjct: 41 SLLVRNIPLDCRPEELRVPFERFGPVRDVYIPKDYYSGEPRGFAFVQ 87
>gi|411119073|ref|ZP_11391453.1| RRM domain-containing RNA-binding protein [Oscillatoriales
cyanobacterium JSC-12]
gi|410710936|gb|EKQ68443.1| RRM domain-containing RNA-binding protein [Oscillatoriales
cyanobacterium JSC-12]
Length = 85
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 30/47 (63%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+++ V NL+YR T DDL VF G V + +P DR T + RGFAFV
Sbjct: 1 MTIYVGNLSYRATADDLTEVFAEYGAVKRVSLPMDRETGKMRGFAFV 47
>gi|115453135|ref|NP_001050168.1| Os03g0363800 [Oryza sativa Japonica Group]
gi|108708312|gb|ABF96107.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113548639|dbj|BAF12082.1| Os03g0363800 [Oryza sativa Japonica Group]
gi|215737124|dbj|BAG96053.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 243
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 35/55 (63%), Gaps = 3/55 (5%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
PP G++ V N++ P+D+R FE+ G V D+Y+PR+ TRE RGF FV+
Sbjct: 57 PPAPTGLL---VRNISLTARPEDIRIPFEQFGPVKDVYLPRNFHTRELRGFGFVK 108
>gi|224102541|ref|XP_002312718.1| predicted protein [Populus trichocarpa]
gi|222852538|gb|EEE90085.1| predicted protein [Populus trichocarpa]
Length = 133
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 31/46 (67%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
L + NL P+DLRR FE+ G + DIY+P++ +T E RGF FV+
Sbjct: 42 LLIRNLPLDARPEDLRRSFEKFGPLKDIYLPKNYYTGEPRGFGFVK 87
>gi|443311045|ref|ZP_21040680.1| RRM domain-containing RNA-binding protein [Synechocystis sp. PCC
7509]
gi|442778894|gb|ELR89152.1| RRM domain-containing RNA-binding protein [Synechocystis sp. PCC
7509]
Length = 102
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 30/47 (63%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+S+ V NL+Y DDL++VF G V + +P DR T +RGFAFV
Sbjct: 1 MSIYVGNLSYEVGQDDLKQVFAEYGTVNRVQVPTDRETGRARGFAFV 47
>gi|442749963|gb|JAA67141.1| Putative rna-binding protein rrm superfamily [Ixodes ricinus]
Length = 863
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 36/59 (61%)
Query: 2 SYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
S+G P + + V NL+Y T DD+ +F++ G + ++++ D+ TR+ +GFAFV
Sbjct: 312 SFGDPTETLADTGRIFVRNLSYTVTEDDIEALFKKFGPISEVHLSIDKITRKPKGFAFV 370
>gi|428768443|ref|YP_007160233.1| RNP-1 like RNA-binding protein [Cyanobacterium aponinum PCC
10605]
gi|428682722|gb|AFZ52189.1| RNP-1 like RNA-binding protein [Cyanobacterium aponinum PCC
10605]
Length = 81
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 31/47 (65%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+S+ V NL+Y + +DL+ VF GEV +Y+P DR T+ RGF FV
Sbjct: 1 MSIYVGNLSYDISENDLQSVFADYGEVKRVYLPLDRETKRKRGFGFV 47
>gi|307192625|gb|EFN75799.1| Probable RNA-binding protein 19 [Harpegnathos saltator]
Length = 863
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 19/43 (44%), Positives = 30/43 (69%)
Query: 18 VDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+ NLTY TT DD+R++FE+ G + ++ +P D+ TR +GF V
Sbjct: 327 IRNLTYTTTEDDVRKLFEKYGPLSEVNLPVDKVTRRLKGFGTV 369
>gi|41055271|ref|NP_956827.1| splicing factor, arginine/serine-rich 13A [Danio rerio]
gi|33604116|gb|AAH56275.1| Zgc:65772 protein [Danio rerio]
gi|42542503|gb|AAH66442.1| Zgc:65772 [Danio rerio]
Length = 248
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 37/59 (62%), Gaps = 5/59 (8%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
Y RPP SL V N++ + P+DLRR F R G + D+YIP D ++R RGFA+++
Sbjct: 4 YMRPP-----NSSLFVRNISDESRPEDLRREFGRYGPIVDVYIPLDFYSRRPRGFAYIQ 57
>gi|108708313|gb|ABF96108.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
Length = 238
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 35/55 (63%), Gaps = 3/55 (5%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
PP G++ V N++ P+D+R FE+ G V D+Y+PR+ TRE RGF FV+
Sbjct: 57 PPAPTGLL---VRNISLTARPEDIRIPFEQFGPVKDVYLPRNFHTRELRGFGFVK 108
>gi|449268059|gb|EMC78930.1| putative RNA-binding protein 19, partial [Columba livia]
Length = 922
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 31/45 (68%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
L V NL + +T +DL ++F + G + DI+ P DR T++ +GFAFV
Sbjct: 408 LFVRNLPFTSTEEDLEKIFSKYGPLSDIHFPIDRLTKKPKGFAFV 452
>gi|50552081|ref|XP_503515.1| YALI0E03828p [Yarrowia lipolytica]
gi|74689524|sp|Q6C747.1|EIF3G_YARLI RecName: Full=Eukaryotic translation initiation factor 3 subunit G;
Short=eIF3g; AltName: Full=Eukaryotic translation
initiation factor 3 RNA-binding subunit; Short=eIF-3
RNA-binding subunit; AltName: Full=Translation
initiation factor eIF3 p33 subunit homolog; Short=eIF3
p33 homolog
gi|49649384|emb|CAG79094.1| YALI0E03828p [Yarrowia lipolytica CLIB122]
Length = 294
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 32/47 (68%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
++L+V NL+ T DDLRR+F + G + +Y+ +DR T RGFAFV
Sbjct: 214 LTLRVTNLSEEATDDDLRRMFGKYGMINRVYVAKDRDTGRPRGFAFV 260
>gi|159470953|ref|XP_001693621.1| SR protein factor [Chlamydomonas reinhardtii]
gi|158283124|gb|EDP08875.1| SR protein factor [Chlamydomonas reinhardtii]
Length = 286
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 31/47 (65%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
VSL V NL +DLR FE+ GE+ D+YIPRD +T+ RGF F+
Sbjct: 51 VSLVVRNLPLDIRMEDLRAKFEKYGELKDVYIPRDYYTQRPRGFGFI 97
>gi|344339676|ref|ZP_08770604.1| RNP-1 like RNA-binding protein [Thiocapsa marina 5811]
gi|343800412|gb|EGV18358.1| RNP-1 like RNA-binding protein [Thiocapsa marina 5811]
Length = 91
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 29/43 (67%)
Query: 18 VDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
V NLTY T DDLR VF + GE+ + +D+F+ +S+GF FV
Sbjct: 5 VGNLTYSVTDDDLRDVFGQYGELAAAEVIKDKFSGQSKGFGFV 47
>gi|298492825|ref|YP_003723002.1| RNP-1 like RNA-binding protein ['Nostoc azollae' 0708]
gi|298234743|gb|ADI65879.1| RNP-1 like RNA-binding protein ['Nostoc azollae' 0708]
Length = 101
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 31/47 (65%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+S+ V NL+Y+ T DDL++ F G+V + +P DR T RGFAFV
Sbjct: 1 MSIYVGNLSYQVTEDDLKQAFAEYGKVSRVQLPTDRETGRLRGFAFV 47
>gi|147903707|ref|NP_001088237.1| serine/arginine-rich splicing factor 12 [Xenopus laevis]
gi|54038377|gb|AAH84231.1| LOC495068 protein [Xenopus laevis]
Length = 251
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 35/59 (59%), Gaps = 5/59 (8%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
Y RPP SL V N+ T P+DLRR F R G + D+Y+P D + R RGFA+++
Sbjct: 4 YSRPP-----NTSLFVRNVGDATRPEDLRREFGRYGPIVDVYVPLDFYNRRPRGFAYIQ 57
>gi|357462657|ref|XP_003601610.1| Arginine/serine-rich splicing factor [Medicago truncatula]
gi|355490658|gb|AES71861.1| Arginine/serine-rich splicing factor [Medicago truncatula]
gi|388503978|gb|AFK40055.1| unknown [Medicago truncatula]
Length = 248
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 31/48 (64%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
SL V NL + P+DLRR F G + DIY+P+D +T + RGF F++
Sbjct: 41 TSLLVRNLRHDCRPEDLRRPFGHFGPLKDIYLPKDYYTGQPRGFGFIQ 88
>gi|348680240|gb|EGZ20056.1| hypothetical protein PHYSODRAFT_354260 [Phytophthora sojae]
Length = 251
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFER-CGEVGDIYIPRDRFTRESRGFAFV 60
+SL V NL+ TT D+LRR F R G++ D+YIP++ + RGFAF+
Sbjct: 81 ISLLVRNLSPETTQDELRRAFSRRAGDILDVYIPKEYNSNRPRGFAFI 128
>gi|195648951|gb|ACG43943.1| FUS-interacting serine-arginine-rich protein 1 [Zea mays]
gi|448878230|gb|AGE46078.1| arginine/serine-rich splicing factor SCL28 transcript I [Zea mays]
Length = 240
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%)
Query: 12 GMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
L + N++ P+D+R FE+ G + D+Y+PR+ TRE RGF FV+
Sbjct: 55 AQSGLLIRNISLTARPEDIRATFEQFGPIKDVYLPRNFHTRELRGFGFVK 104
>gi|413947426|gb|AFW80075.1| hypothetical protein ZEAMMB73_562035 [Zea mays]
Length = 661
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 36/58 (62%), Gaps = 5/58 (8%)
Query: 4 GRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
GRP +++ ++ + + + PDDLRR F + G V DIY+ D +TRE RGF F++
Sbjct: 571 GRPRTQVQHLMQIGL-----KGWPDDLRRPFGKFGPVKDIYLSNDYYTREPRGFGFIQ 623
>gi|448878234|gb|AGE46080.1| arginine/serine-rich splicing factor SCL28 transcript III [Zea
mays]
Length = 232
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%)
Query: 12 GMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
L + N++ P+D+R FE+ G + D+Y+PR+ TRE RGF FV+
Sbjct: 55 AQSGLLIRNISLTARPEDIRATFEQFGPIKDVYLPRNFHTRELRGFGFVK 104
>gi|357492235|ref|XP_003616406.1| Splicing factor, arginine/serine-rich 13A [Medicago truncatula]
gi|355517741|gb|AES99364.1| Splicing factor, arginine/serine-rich 13A [Medicago truncatula]
Length = 286
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 32/47 (68%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
SL V N+ P++LR FER G V D+YIP+D ++ + RGFAFV+
Sbjct: 48 SLLVRNIPLDCRPEELRAPFERFGPVRDVYIPKDYYSGQPRGFAFVQ 94
>gi|115489208|ref|NP_001067091.1| Os12g0572400 [Oryza sativa Japonica Group]
gi|77556878|gb|ABA99674.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113649598|dbj|BAF30110.1| Os12g0572400 [Oryza sativa Japonica Group]
gi|215694562|dbj|BAG89555.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222617335|gb|EEE53467.1| hypothetical protein OsJ_36595 [Oryza sativa Japonica Group]
Length = 263
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 33/52 (63%)
Query: 9 RIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
R +G SL V N+ +DLR FER G V D+Y+P+D ++ E RGFAFV
Sbjct: 32 REQGSGSLLVRNIPLSCRGEDLRVPFERFGPVRDVYLPKDYYSGEPRGFAFV 83
>gi|313231584|emb|CBY08698.1| unnamed protein product [Oikopleura dioica]
Length = 278
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 33/46 (71%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+++V NL+ T DD++ +F + G++ I++ RDR T ESRGFAF+
Sbjct: 182 AIRVSNLSPAATQDDVQTLFAKFGKIARIHLGRDRRTNESRGFAFI 227
>gi|119485430|ref|ZP_01619758.1| RNA-binding region protein [Lyngbya sp. PCC 8106]
gi|119457186|gb|EAW38312.1| RNA-binding region protein [Lyngbya sp. PCC 8106]
Length = 100
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 30/47 (63%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+S+ V NL+Y+ T +DLR VF G V + IP DR T RGFAFV
Sbjct: 1 MSVYVGNLSYQVTEEDLRSVFAEYGTVKQVSIPTDRETGRPRGFAFV 47
>gi|218187112|gb|EEC69539.1| hypothetical protein OsI_38819 [Oryza sativa Indica Group]
Length = 263
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 33/52 (63%)
Query: 9 RIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
R +G SL V N+ +DLR FER G V D+Y+P+D ++ E RGFAFV
Sbjct: 32 REQGSGSLLVRNIPLSCRGEDLRVPFERFGPVRDVYLPKDYYSGEPRGFAFV 83
>gi|224031575|gb|ACN34863.1| unknown [Zea mays]
Length = 240
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%)
Query: 12 GMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
L + N++ P+D+R FE+ G + D+Y+PR+ TRE RGF FV+
Sbjct: 55 AQSGLLIRNISLTARPEDIRATFEQFGPIKDVYLPRNFHTRELRGFGFVK 104
>gi|322787083|gb|EFZ13307.1| hypothetical protein SINV_16564 [Solenopsis invicta]
Length = 859
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 18/43 (41%), Positives = 30/43 (69%)
Query: 18 VDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+ NLTY T DD++++FE+ G + ++ +P DR TR+ +GF V
Sbjct: 319 IRNLTYTVTEDDIKKLFEKYGPLSEVDLPVDRITRKPKGFGTV 361
>gi|51893978|ref|YP_076669.1| glycine-rich RNA-binding protein [Symbiobacterium thermophilum
IAM 14863]
gi|51857667|dbj|BAD41825.1| glycine-rich RNA-binding protein [Symbiobacterium thermophilum
IAM 14863]
Length = 86
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 30/46 (65%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
S+ V NL + TTP+DLR +FE GEV + I DR T SRGF FV
Sbjct: 4 SIYVGNLPWSTTPEDLRALFEPYGEVENARIITDRETGRSRGFGFV 49
>gi|403267211|ref|XP_003925741.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein
A1-like 3-like [Saimiri boliviensis boliviensis]
Length = 71
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MS P +E + L + L++ TT + LR FE+ G + D + RD T+ SRGFAFV
Sbjct: 1 MSKSESPKELEQLRKLFIGGLSFETTDESLRSHFEQWGMLTDCVVMRDPNTKPSRGFAFV 60
>gi|328773827|gb|EGF83864.1| hypothetical protein BATDEDRAFT_8977, partial [Batrachochytrium
dendrobatidis JAM81]
Length = 873
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 35/55 (63%)
Query: 6 PPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
P I + V NLTY +P+D+ +F+ G + +++IP DR T++S+G+AF+
Sbjct: 331 PAELIADTGRIMVRNLTYLCSPEDIEELFKPFGPISEVHIPIDRETKKSKGYAFI 385
>gi|383847362|ref|XP_003699323.1| PREDICTED: probable RNA-binding protein 19-like [Megachile
rotundata]
Length = 886
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 18/43 (41%), Positives = 31/43 (72%)
Query: 18 VDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
V NL+Y TT DD+R++FE+ G + ++ +P D+ TR+ +GF +
Sbjct: 354 VRNLSYTTTEDDIRKLFEKYGPLTEVNLPIDKVTRKPKGFGTI 396
>gi|224139940|ref|XP_002323350.1| predicted protein [Populus trichocarpa]
gi|222867980|gb|EEF05111.1| predicted protein [Populus trichocarpa]
Length = 131
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 30/48 (62%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
SL V NL P+DLR F R G + D+Y+PRD +T E RGF FV+
Sbjct: 38 TSLLVRNLRLDCRPEDLRGPFGRFGPLKDVYLPRDYYTGEPRGFGFVQ 85
>gi|226504024|ref|NP_001140489.1| uncharacterized protein LOC100272550 [Zea mays]
gi|194699696|gb|ACF83932.1| unknown [Zea mays]
gi|448878232|gb|AGE46079.1| arginine/serine-rich splicing factor SCL28 transcript II [Zea mays]
Length = 188
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 31/46 (67%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
L + N++ P+D+R FE+ G + D+Y+PR+ TRE RGF FV+
Sbjct: 59 LLIRNISLTARPEDIRATFEQFGPIKDVYLPRNFHTRELRGFGFVK 104
>gi|321463296|gb|EFX74313.1| hypothetical protein DAPPUDRAFT_307331 [Daphnia pulex]
Length = 393
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 34/56 (60%)
Query: 5 RPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+ P E L + L YRTT + L++ FE+ G++ D+ + +D TR+SRGF FV
Sbjct: 35 KEKPEAEQFRKLFIGGLDYRTTDESLKKHFEQWGQIVDVVVMKDPKTRKSRGFGFV 90
>gi|22299798|ref|NP_683045.1| RNA-binding protein [Thermosynechococcus elongatus BP-1]
gi|22295982|dbj|BAC09807.1| RNA-binding protein [Thermosynechococcus elongatus BP-1]
Length = 94
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 28/47 (59%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+S+ V NL+Y T +DL VF G V +Y+P DR T RGF FV
Sbjct: 1 MSIYVGNLSYTATQEDLEAVFAEYGSVKQVYLPVDRETGRKRGFGFV 47
>gi|357478559|ref|XP_003609565.1| Splicing factor, arginine/serine-rich 13A [Medicago truncatula]
gi|355510620|gb|AES91762.1| Splicing factor, arginine/serine-rich 13A [Medicago truncatula]
Length = 314
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 30/46 (65%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
L V NL P+DLR FER G V D+Y+PR+ +T E RGF FV+
Sbjct: 50 LLVRNLPLDARPEDLRGPFERYGPVKDVYLPRNYYTGEPRGFGFVK 95
>gi|284929607|ref|YP_003422129.1| RRM domain-containing RNA-binding protein [cyanobacterium UCYN-A]
gi|284810051|gb|ADB95748.1| RRM domain-containing RNA-binding protein [cyanobacterium UCYN-A]
Length = 81
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 30/48 (62%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
+S+ V NL++ T D+ VF+ GEV +Y+P DR T + RGF FV
Sbjct: 1 MSIYVGNLSFEATEADVTNVFKEYGEVKKVYLPSDRETGKMRGFGFVE 48
>gi|443477523|ref|ZP_21067364.1| RNP-1 like RNA-binding protein [Pseudanabaena biceps PCC 7429]
gi|443017338|gb|ELS31803.1| RNP-1 like RNA-binding protein [Pseudanabaena biceps PCC 7429]
Length = 111
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 31/47 (65%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+S+ V NL+Y T D L+ VFE G+V ++ P DR T +RGFAFV
Sbjct: 1 MSIYVGNLSYEVTQDHLKPVFEDYGKVTRVHFPTDRETGRARGFAFV 47
>gi|32352198|dbj|BAC78592.1| pre-mRNA splicing factor [Oryza sativa Japonica Group]
Length = 232
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 33/52 (63%)
Query: 9 RIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
R +G SL V N+ +DLR FER G V D+Y+P+D ++ E RGFAFV
Sbjct: 1 REQGSGSLLVRNIPLSCRGEDLRVPFERFGPVRDVYLPKDYYSGEPRGFAFV 52
>gi|392404677|ref|YP_006441289.1| RNP-1 like RNA-binding protein [Turneriella parva DSM 21527]
gi|390612631|gb|AFM13783.1| RNP-1 like RNA-binding protein [Turneriella parva DSM 21527]
Length = 141
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 30/47 (63%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+++ V NL Y T ++LR FE G+V + I RDR T SRGFAFV
Sbjct: 1 MNIYVGNLAYNATDEELRSAFEAFGQVTSVKIVRDRDTGRSRGFAFV 47
>gi|282896900|ref|ZP_06304906.1| RNA-binding region protein RNP-1 [Raphidiopsis brookii D9]
gi|281198309|gb|EFA73199.1| RNA-binding region protein RNP-1 [Raphidiopsis brookii D9]
Length = 92
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 31/47 (65%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+++ + NL+YR T DL+ VF GEV + +P DR T + RGFAFV
Sbjct: 1 MTIYIGNLSYRATEADLKSVFADYGEVKRVVLPTDRETGKMRGFAFV 47
>gi|428773895|ref|YP_007165683.1| RNP-1 like RNA-binding protein [Cyanobacterium stanieri PCC 7202]
gi|428688174|gb|AFZ48034.1| RNP-1 like RNA-binding protein [Cyanobacterium stanieri PCC 7202]
Length = 90
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 31/47 (65%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+S+ V NL+Y T +DL+ VF G+V +Y+P DR T+ RGF FV
Sbjct: 1 MSIYVGNLSYDVTEEDLQTVFSDYGQVKRVYLPVDRETKRMRGFGFV 47
>gi|428203095|ref|YP_007081684.1| RRM domain-containing RNA-binding protein [Pleurocapsa sp. PCC
7327]
gi|427980527|gb|AFY78127.1| RRM domain-containing RNA-binding protein [Pleurocapsa sp. PCC
7327]
Length = 99
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 30/47 (63%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+S+ V NL+Y T +DL RVF+ G V + +P DR T RGFAFV
Sbjct: 1 MSIYVGNLSYEVTQEDLERVFKEYGTVNRVQMPTDRETGRPRGFAFV 47
>gi|427728558|ref|YP_007074795.1| RRM domain-containing RNA-binding protein [Nostoc sp. PCC 7524]
gi|427364477|gb|AFY47198.1| RRM domain-containing RNA-binding protein [Nostoc sp. PCC 7524]
Length = 94
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 30/47 (63%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+++ V NL+YR T DLR VF GEV + +P DR T RGFAFV
Sbjct: 1 MTIYVGNLSYRATEADLRAVFADYGEVKRVVLPTDRETGRMRGFAFV 47
>gi|332709842|ref|ZP_08429799.1| RRM domain RNA-binding protein [Moorea producens 3L]
gi|332351440|gb|EGJ31023.1| RRM domain RNA-binding protein [Moorea producens 3L]
Length = 96
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 32/47 (68%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+++ + NL Y+ T ++L+ VF+ G V + +P+DR T + RGFAFV
Sbjct: 1 MTIYIGNLDYQVTSENLQEVFQDYGTVSKVVVPKDRETGQGRGFAFV 47
>gi|118474079|ref|YP_892397.1| RNA-binding region RNP-1 [Campylobacter fetus subsp. fetus 82-40]
gi|424821065|ref|ZP_18246103.1| RNA-binding region RNP-1 [Campylobacter fetus subsp. venerealis
NCTC 10354]
gi|118413305|gb|ABK81725.1| RNA-binding region RNP-1 [Campylobacter fetus subsp. fetus 82-40]
gi|342327844|gb|EGU24328.1| RNA-binding region RNP-1 [Campylobacter fetus subsp. venerealis
NCTC 10354]
Length = 82
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 30/48 (62%)
Query: 13 MVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
M+++ V NL+YR T +LR VF GEV I +D+ T S+GF FV
Sbjct: 1 MINIYVGNLSYRMTESELREVFSSFGEVTRAKIVKDKETNRSKGFGFV 48
>gi|66362632|ref|XP_628282.1| splicing factor RRM domain containing protein; T22E16.120 SC35-like
splicing factor [Cryptosporidium parvum Iowa II]
gi|67590297|ref|XP_665474.1| dentin phosphoryn [Cryptosporidium hominis TU502]
gi|46229752|gb|EAK90570.1| splicing factor RRM domain containing protein; T22E16.120 SC35-like
splicing factor [Cryptosporidium parvum Iowa II]
gi|54656181|gb|EAL35244.1| dentin phosphoryn [Cryptosporidium hominis]
gi|323508677|dbj|BAJ77232.1| cgd7_940 [Cryptosporidium parvum]
gi|323510599|dbj|BAJ78193.1| cgd7_940 [Cryptosporidium parvum]
Length = 286
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 30/46 (65%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
SL V NL + T+P +R FER G V D+Y+P D +TR RGF FV
Sbjct: 91 SLLVRNLRFETSPGRVRHHFERYGPVRDVYLPLDYYTRRPRGFGFV 136
>gi|284929630|ref|YP_003422152.1| RRM domain-containing RNA-binding protein [cyanobacterium UCYN-A]
gi|284810074|gb|ADB95771.1| RRM domain-containing RNA-binding protein [cyanobacterium UCYN-A]
Length = 96
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 30/47 (63%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+S+ V NL+Y T +DL VF GEV ++IP DR T RGFAFV
Sbjct: 1 MSIYVGNLSYDVTKEDLNEVFTDYGEVKRVHIPTDRDTGRMRGFAFV 47
>gi|172038249|ref|YP_001804750.1| RNA-binding protein [Cyanothece sp. ATCC 51142]
gi|354554398|ref|ZP_08973703.1| RNP-1 like RNA-binding protein [Cyanothece sp. ATCC 51472]
gi|171699703|gb|ACB52684.1| RNA-binding protein [Cyanothece sp. ATCC 51142]
gi|353554077|gb|EHC23468.1| RNP-1 like RNA-binding protein [Cyanothece sp. ATCC 51472]
Length = 97
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 30/47 (63%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+S+ V NL+Y T +DL VF GEV ++IP DR T RGFAFV
Sbjct: 1 MSIYVGNLSYDVTKEDLSEVFTDYGEVKRVHIPTDRDTGRMRGFAFV 47
>gi|427726014|ref|YP_007073291.1| RNP-1 like RNA-binding protein [Leptolyngbya sp. PCC 7376]
gi|427357734|gb|AFY40457.1| RNP-1 like RNA-binding protein [Leptolyngbya sp. PCC 7376]
Length = 100
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 29/47 (61%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+S+ + NL+Y T DDLR VF G V + IP DR T RGFAFV
Sbjct: 1 MSIYIGNLSYEVTEDDLRDVFADYGTVKRVQIPTDRETSRPRGFAFV 47
>gi|238566092|ref|XP_002385995.1| hypothetical protein MPER_15952 [Moniliophthora perniciosa FA553]
gi|215436602|gb|EEB86925.1| hypothetical protein MPER_15952 [Moniliophthora perniciosa FA553]
Length = 110
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 34/51 (66%), Gaps = 5/51 (9%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTR-----ESRGFAFV 60
S+ V NL+++TTPD LR+ FE GE+ I++P +R E+RGFA+V
Sbjct: 37 SVWVGNLSFKTTPDALRKFFEDVGEITRIHMPMKFVSRPGGLGENRGFAYV 87
>gi|168056094|ref|XP_001780057.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668555|gb|EDQ55160.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 225
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 31/51 (60%)
Query: 11 EGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
E SL V N+ T DDLR FER G V D+Y+PRD +T RGF FV+
Sbjct: 53 EPPTSLLVRNIPRDCTADDLRIPFERYGVVKDVYLPRDYYTGLPRGFGFVQ 103
>gi|427714396|ref|YP_007063020.1| RRM domain-containing RNA-binding protein [Synechococcus sp. PCC
6312]
gi|427378525|gb|AFY62477.1| RRM domain-containing RNA-binding protein [Synechococcus sp. PCC
6312]
Length = 91
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 28/47 (59%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+S+ V NL+Y T +DL VF G V +Y+P DR T RGF FV
Sbjct: 1 MSIYVGNLSYTATQEDLEAVFAEYGSVKQVYLPVDRDTGRKRGFGFV 47
>gi|427727788|ref|YP_007074025.1| RRM domain-containing RNA-binding protein [Nostoc sp. PCC 7524]
gi|427363707|gb|AFY46428.1| RRM domain-containing RNA-binding protein [Nostoc sp. PCC 7524]
Length = 101
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 31/47 (65%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+S+ + NL+Y+ T +DL+R F G+V + +P DR T RGFAFV
Sbjct: 1 MSIYIGNLSYQVTEEDLKRAFAEYGKVNRVQLPTDRETGRPRGFAFV 47
>gi|170076900|ref|YP_001733538.1| RNA-binding protein [Synechococcus sp. PCC 7002]
gi|169884569|gb|ACA98282.1| RNA-binding protein [Synechococcus sp. PCC 7002]
Length = 84
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 29/47 (61%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+S+ V NL Y DDLR VF G+V +Y+P DR T+ RGF FV
Sbjct: 1 MSIYVGNLDYAVEEDDLREVFNDYGKVKRVYLPVDRETQRKRGFGFV 47
>gi|428205820|ref|YP_007090173.1| RNP-1 like RNA-binding protein [Chroococcidiopsis thermalis PCC
7203]
gi|428007741|gb|AFY86304.1| RNP-1 like RNA-binding protein [Chroococcidiopsis thermalis PCC
7203]
Length = 104
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 30/47 (63%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+++ V NL+YR T +DLR VF G + I +P DR T RGFAFV
Sbjct: 1 MTIYVGNLSYRATEEDLRTVFAEYGAIKRIVLPMDRETGRMRGFAFV 47
>gi|427718424|ref|YP_007066418.1| RNP-1 like RNA-binding protein [Calothrix sp. PCC 7507]
gi|427350860|gb|AFY33584.1| RNP-1 like RNA-binding protein [Calothrix sp. PCC 7507]
Length = 101
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 30/47 (63%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+S+ V NL+Y+ T +DL+R F G V + +P DR T RGFAFV
Sbjct: 1 MSIYVGNLSYQVTEEDLKRAFAEYGTVNRVQLPTDRETGRPRGFAFV 47
>gi|348680071|gb|EGZ19887.1| hypothetical protein PHYSODRAFT_489640 [Phytophthora sojae]
Length = 536
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 32/54 (59%)
Query: 8 PRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
PR EG ++ V NL Y T + LR+VF++CG + + T+E RGF +V+
Sbjct: 110 PRPEGCTTIYVGNLAYDITEEVLRKVFDKCGSIRAVRFAEHIQTKEFRGFGYVQ 163
>gi|70928216|ref|XP_736352.1| Ser/Arg-rich splicing factor [Plasmodium chabaudi chabaudi]
gi|56510813|emb|CAH84192.1| Ser/Arg-rich splicing factor, putative [Plasmodium chabaudi
chabaudi]
Length = 129
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+SL + L + T+P +R F++ G + D+Y+P D +T+E RGF FV
Sbjct: 12 MSLLIRKLKFNTSPSMVREKFKKFGAIKDVYLPIDYYTKEPRGFGFV 58
>gi|384254118|gb|EIE27592.1| translation initiation factor 3, RNA-binding subunit [Coccomyxa
subellipsoidea C-169]
Length = 285
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 30/46 (65%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
S++V NL+ T DDLR +F G + IYI DR T ESRGFAFV
Sbjct: 203 SVRVTNLSEDTREDDLRELFSPFGPISRIYIAYDRETGESRGFAFV 248
>gi|354568213|ref|ZP_08987379.1| RNP-1 like RNA-binding protein [Fischerella sp. JSC-11]
gi|353541178|gb|EHC10648.1| RNP-1 like RNA-binding protein [Fischerella sp. JSC-11]
Length = 103
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 34/57 (59%), Gaps = 3/57 (5%)
Query: 7 PPRIEGMV---SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
PP IE V ++ V NL+Y T +DL+ VF G+V + +P DR T RGFAFV
Sbjct: 2 PPPIETYVIQMTIYVGNLSYSATEEDLKAVFAEYGQVKRVVLPTDRDTGRLRGFAFV 58
>gi|427738521|ref|YP_007058065.1| RRM domain-containing RNA-binding protein [Rivularia sp. PCC
7116]
gi|427373562|gb|AFY57518.1| RRM domain-containing RNA-binding protein [Rivularia sp. PCC
7116]
Length = 91
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+S+ V NL+Y ++L+++F GEV IY+P DR RGFAFV
Sbjct: 1 MSIYVGNLSYEVVEEELKQIFLEYGEVKSIYLPMDRDAGRIRGFAFV 47
>gi|397642327|gb|EJK75167.1| hypothetical protein THAOC_03118, partial [Thalassiosira oceanica]
Length = 452
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 34/58 (58%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
YG P+ V L V NL++ T + +R +FE+ G V D ++P DR T RGFAFV
Sbjct: 117 YGAFNPQGREDVKLYVGNLSFDTNEEAVRSMFEQYGTVSDCFLPSDRDTGRPRGFAFV 174
Score = 41.6 bits (96), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 26/47 (55%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
V L + NL Y T LR VF G V D+++P +R T RGF FV
Sbjct: 19 VKLYIGNLDYSTDEPQLRSVFGAFGAVTDVFLPMERGTSRPRGFGFV 65
>gi|282898657|ref|ZP_06306645.1| RNA-binding region protein RNP-1 [Cylindrospermopsis raciborskii
CS-505]
gi|281196525|gb|EFA71434.1| RNA-binding region protein RNP-1 [Cylindrospermopsis raciborskii
CS-505]
Length = 96
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 31/47 (65%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+++ + NL+YR T DL+ VF GEV + +P DR T + RGFAFV
Sbjct: 1 MTIYIGNLSYRATEADLKAVFADYGEVKRVVLPTDRETGKMRGFAFV 47
>gi|357017461|gb|AET50759.1| hypothetical protein [Eimeria tenella]
Length = 196
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 31/47 (65%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+SL V NL+Y+T+P+ +R F G V D+Y+P D +R RGF FV
Sbjct: 10 MSLLVRNLSYQTSPEAVRSAFAVHGSVKDVYLPLDYHSRMPRGFGFV 56
>gi|440295453|gb|ELP88366.1| multiple RNA-binding domain containing protein, putative [Entamoeba
invadens IP1]
Length = 685
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 31/43 (72%)
Query: 18 VDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
V+NL Y + D+R FE+ GE+ ++++P D+ + +++GFAFV
Sbjct: 217 VNNLPYACSEQDVREAFEKFGEITEVHLPIDKVSGKTKGFAFV 259
>gi|425466927|ref|ZP_18846221.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC
9809]
gi|389830426|emb|CCI27637.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC
9809]
Length = 97
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 32/47 (68%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+S+ V NL+Y + +DL VF+ G+V ++IP DR T+ RGFAFV
Sbjct: 1 MSIFVGNLSYEISQEDLVDVFKEYGQVQRVHIPVDRETQRKRGFAFV 47
>gi|224098431|ref|XP_002311171.1| predicted protein [Populus trichocarpa]
gi|222850991|gb|EEE88538.1| predicted protein [Populus trichocarpa]
Length = 272
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 31/47 (65%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
SL V N+ P++LR +FER G V D+YIP+D T E RGF FV+
Sbjct: 45 SLLVRNIPRDCRPEELRGMFERFGVVRDVYIPKDYHTGEPRGFGFVQ 91
>gi|255551589|ref|XP_002516840.1| serine/arginine rich splicing factor, putative [Ricinus communis]
gi|223543928|gb|EEF45454.1| serine/arginine rich splicing factor, putative [Ricinus communis]
Length = 257
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 30/46 (65%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
L V NL P+DLR FE+ G V D+Y+P++ +T E RGF FV+
Sbjct: 54 LLVRNLPLDARPEDLRGPFEKYGPVKDVYLPKNYYTGEPRGFGFVK 99
>gi|392588092|gb|EIW77425.1| translation initiation factor eIF3g [Coniophora puteana RWD-64-598
SS2]
Length = 298
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 34/54 (62%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
P R + + +L+V N++ T +DLR +F R G V +Y+ RDR T +GFAFV
Sbjct: 208 PGRGDDLPTLRVTNISEDTQENDLRDLFGRFGRVARVYVGRDRETGAGKGFAFV 261
>gi|255639915|gb|ACU20250.1| unknown [Glycine max]
Length = 270
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 30/46 (65%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
L V NL P+DLR FER G V D+Y+P++ +T E RGF FV+
Sbjct: 51 LLVRNLPLDARPEDLRIPFERYGPVKDVYLPKNYYTGEPRGFGFVK 96
>gi|448878421|gb|AGE46173.1| arginine/serine-rich splicing factor SCL33 transcript I
[Physcomitrella patens subsp. patens]
Length = 286
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 31/51 (60%)
Query: 11 EGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
E SL V N+ T DDLR FER G V D+Y+PRD +T RGF FV+
Sbjct: 53 EPPTSLLVRNIPRDCTADDLRIPFERYGVVKDVYLPRDYYTGLPRGFGFVQ 103
>gi|427719763|ref|YP_007067757.1| RNP-1 like RNA-binding protein [Calothrix sp. PCC 7507]
gi|427352199|gb|AFY34923.1| RNP-1 like RNA-binding protein [Calothrix sp. PCC 7507]
Length = 94
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 30/47 (63%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+++ V NL+YR T DLR VF GEV + +P DR T RGFAFV
Sbjct: 1 MTIYVGNLSYRATEADLRAVFADYGEVKRVVLPTDRETGRLRGFAFV 47
>gi|46139099|ref|XP_391240.1| hypothetical protein FG11064.1 [Gibberella zeae PH-1]
Length = 127
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 29/48 (60%)
Query: 13 MVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
M L V NL++ TT + LR+ F GEV D I RDR T +RGF FV
Sbjct: 1 MSKLYVGNLSWNTTDETLRQTFSEFGEVTDSIIMRDRDTGRARGFGFV 48
>gi|428313428|ref|YP_007124405.1| RRM domain-containing RNA-binding protein [Microcoleus sp. PCC
7113]
gi|428255040|gb|AFZ20999.1| RRM domain-containing RNA-binding protein [Microcoleus sp. PCC
7113]
Length = 93
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 29/47 (61%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+S+ V NL+Y+ T +DL VF G V + IP DR T SRGF FV
Sbjct: 1 MSIYVGNLSYQVTSEDLSSVFAEYGTVKRVQIPTDRETGRSRGFGFV 47
>gi|312066967|ref|XP_003136521.1| hypothetical protein LOAG_00933 [Loa loa]
Length = 345
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 28/41 (68%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESR 55
+L V + Y PDDLR +FER G V D+YIP D +TRESR
Sbjct: 15 TLYVRQVHYSARPDDLRALFERMGPVRDVYIPLDYYTRESR 55
>gi|18410283|ref|NP_567021.1| SC35-like splicing factor 30 [Arabidopsis thaliana]
gi|20466366|gb|AAM20500.1| putative RNA binding protein [Arabidopsis thaliana]
gi|21554261|gb|AAM63336.1| putative RNA binding protein [Arabidopsis thaliana]
gi|22136316|gb|AAM91236.1| putative RNA binding protein [Arabidopsis thaliana]
gi|332645866|gb|AEE79387.1| SC35-like splicing factor 30 [Arabidopsis thaliana]
Length = 262
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 30/45 (66%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
L V N+ P++LR FER G V D+YIPRD ++ + RGFAFV
Sbjct: 49 LLVRNIPLDCRPEELREPFERFGPVRDVYIPRDYYSGQPRGFAFV 93
>gi|297816842|ref|XP_002876304.1| hypothetical protein ARALYDRAFT_485973 [Arabidopsis lyrata subsp.
lyrata]
gi|297322142|gb|EFH52563.1| hypothetical protein ARALYDRAFT_485973 [Arabidopsis lyrata subsp.
lyrata]
Length = 260
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 30/45 (66%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
L V N+ P++LR FER G V D+YIPRD ++ E RGFAFV
Sbjct: 48 LLVRNIPLDCRPEELRVPFERFGPVRDVYIPRDYYSGEPRGFAFV 92
>gi|220906552|ref|YP_002481863.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7425]
gi|219863163|gb|ACL43502.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7425]
Length = 101
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 30/47 (63%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+S+ + NL+Y T DDL +VF G V +++P DR T RGFAFV
Sbjct: 1 MSIYIGNLSYTVTQDDLIQVFGEYGTVKSVHLPTDRETGRMRGFAFV 47
>gi|440714448|ref|ZP_20895027.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula baltica SWK14]
gi|436440644|gb|ELP33948.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula baltica SWK14]
Length = 196
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 32/48 (66%)
Query: 13 MVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+ ++ V NL+++ T ++LR FE+ GEV + I DR T SRGFAFV
Sbjct: 54 VTNIYVGNLSFKATEEELRGAFEQYGEVSAVNIIMDRETGRSRGFAFV 101
>gi|421614043|ref|ZP_16055112.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula baltica SH28]
gi|408495250|gb|EKJ99839.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula baltica SH28]
Length = 189
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 32/48 (66%)
Query: 13 MVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+ ++ V NL+++ T ++LR FE+ GEV + I DR T SRGFAFV
Sbjct: 54 VTNIYVGNLSFKATEEELRGAFEQYGEVSAVNIIMDRETGRSRGFAFV 101
>gi|417304381|ref|ZP_12091404.1| protein containing RNA recognition motif, RNP-1 domains
[Rhodopirellula baltica WH47]
gi|449136828|ref|ZP_21772190.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula europaea 6C]
gi|327539333|gb|EGF25954.1| protein containing RNA recognition motif, RNP-1 domains
[Rhodopirellula baltica WH47]
gi|448884533|gb|EMB15023.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula europaea 6C]
Length = 195
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 32/48 (66%)
Query: 13 MVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+ ++ V NL+++ T ++LR FE+ GEV + I DR T SRGFAFV
Sbjct: 54 VTNIYVGNLSFKATEEELRGAFEQYGEVSAVNIIMDRETGRSRGFAFV 101
>gi|241779177|ref|XP_002399858.1| splicing factor SC35, putative [Ixodes scapularis]
gi|215508537|gb|EEC17991.1| splicing factor SC35, putative [Ixodes scapularis]
Length = 209
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 35/59 (59%), Gaps = 5/59 (8%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
Y RPP SL + N+ T P+DLR +F + G + D+YIP D + R RGFA+V+
Sbjct: 5 YSRPP-----NSSLFIRNVPDGTRPEDLRSLFGKYGPITDVYIPVDYYARRPRGFAYVQ 58
>gi|392334561|ref|XP_003753212.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like
[Rattus norvegicus]
Length = 356
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 23/57 (40%), Positives = 32/57 (56%)
Query: 4 GRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
G P +E + L + L++ TT D LR FE+ G + D + RD T+ SRGF FV
Sbjct: 3 GHDPKELEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFV 59
>gi|326922673|ref|XP_003207572.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 homolog
1-like [Meleagris gallopavo]
Length = 378
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 32/59 (54%)
Query: 2 SYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
S G P E + L + L++ TT D LR FE+ G + D + RD T+ SRGF FV
Sbjct: 21 SQGHEPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFV 79
>gi|60098573|emb|CAH65117.1| hypothetical protein RCJMB04_3n1 [Gallus gallus]
Length = 621
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 31/45 (68%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
L V NL + +T +DL ++F + G + +I+ P DR T++ +GFAF+
Sbjct: 80 LFVRNLPFTSTEEDLEKIFSKYGPLSEIHFPIDRLTKKPKGFAFI 124
>gi|443478888|ref|ZP_21068579.1| RNP-1 like RNA-binding protein [Pseudanabaena biceps PCC 7429]
gi|443015762|gb|ELS30586.1| RNP-1 like RNA-binding protein [Pseudanabaena biceps PCC 7429]
Length = 109
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 31/48 (64%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
+S+ V NL+Y T DDL+ VF G++ +++P DR + RGFAFV
Sbjct: 1 MSIYVGNLSYEVTEDDLKAVFSEYGKITRVHLPIDRESGRPRGFAFVE 48
>gi|395324282|gb|EJF56725.1| translation initiation factor 3, RNA-binding subunit [Dichomitus
squalens LYAD-421 SS1]
Length = 290
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 35/59 (59%)
Query: 2 SYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
S GRP + + +L+V N++ T +DLR +F G V +Y+ RDR T +GFAFV
Sbjct: 196 SMGRPGGSRDDLPTLRVTNISEDTQENDLRDLFGGFGRVARVYVGRDRETGAGKGFAFV 254
>gi|301106378|ref|XP_002902272.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262098892|gb|EEY56944.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 528
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 32/54 (59%)
Query: 8 PRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
PR EG ++ V NL Y T + LR+VF++CG + + T+E RGF +V+
Sbjct: 113 PRPEGCTTIYVGNLAYDITEEVLRKVFDKCGSIRAVRFAEHIQTKEFRGFGYVQ 166
>gi|225156280|ref|ZP_03724758.1| RNP-1 like RNA-binding protein [Diplosphaera colitermitum TAV2]
gi|224803012|gb|EEG21257.1| RNP-1 like RNA-binding protein [Diplosphaera colitermitum TAV2]
Length = 106
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 28/45 (62%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
L V NL++ T+ DLR F CG + D+++ DR T RGFAFV
Sbjct: 5 LYVGNLSFNTSEADLRTAFSTCGTLTDVFLATDRETGRPRGFAFV 49
>gi|9843657|emb|CAC03602.1| SC35-like splicing factor SCL30, 30 kD [Arabidopsis thaliana]
Length = 262
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 30/45 (66%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
L V N+ P++LR FER G V D+YIPRD ++ + RGFAFV
Sbjct: 49 LLVRNIPLDCRPEELREPFERFGPVRDVYIPRDYYSGQPRGFAFV 93
>gi|448878423|gb|AGE46174.1| arginine/serine-rich splicing factor SCL33 transcript II
[Physcomitrella patens subsp. patens]
Length = 248
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 31/51 (60%)
Query: 11 EGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
E SL V N+ T DDLR FER G V D+Y+PRD +T RGF FV+
Sbjct: 53 EPPTSLLVRNIPRDCTADDLRIPFERYGVVKDVYLPRDYYTGLPRGFGFVQ 103
>gi|7076789|emb|CAB75904.1| putative RNA binding protein [Arabidopsis thaliana]
Length = 309
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 30/45 (66%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
L V N+ P++LR FER G V D+YIPRD ++ + RGFAFV
Sbjct: 49 LLVRNIPLDCRPEELREPFERFGPVRDVYIPRDYYSGQPRGFAFV 93
>gi|241100004|ref|XP_002409732.1| conserved hypothetical protein [Ixodes scapularis]
gi|215492805|gb|EEC02446.1| conserved hypothetical protein [Ixodes scapularis]
Length = 211
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 33/59 (55%), Gaps = 5/59 (8%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
Y RPP SL V NL T P+DLR F + G + D+YIP D TR RGF +V+
Sbjct: 5 YSRPP-----NSSLFVRNLPDGTRPEDLRSFFSKHGPLTDVYIPMDYHTRRPRGFGYVQ 58
>gi|302844725|ref|XP_002953902.1| hypothetical protein VOLCADRAFT_121229 [Volvox carteri f.
nagariensis]
gi|300260714|gb|EFJ44931.1| hypothetical protein VOLCADRAFT_121229 [Volvox carteri f.
nagariensis]
Length = 294
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 29/47 (61%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
SL NL+ TT DDLR ER G + DIY+P+D +T + RG FV
Sbjct: 29 TSLLFRNLSKTTTADDLRHTTERFGPIRDIYLPKDFYTGDPRGLGFV 75
>gi|290993156|ref|XP_002679199.1| RNA binding domain-containing protein [Naegleria gruberi]
gi|284092815|gb|EFC46455.1| RNA binding domain-containing protein [Naegleria gruberi]
Length = 763
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 22/45 (48%), Positives = 31/45 (68%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
L V NL + TT D+L+ +FE GE+ +++IP D T+ SRG AFV
Sbjct: 229 LFVYNLHFTTTEDELKELFEPFGEISELHIPIDNETKISRGVAFV 273
>gi|313147072|ref|ZP_07809265.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
gi|423277356|ref|ZP_17256270.1| hypothetical protein HMPREF1203_00487 [Bacteroides fragilis HMW
610]
gi|424663466|ref|ZP_18100503.1| hypothetical protein HMPREF1205_03852 [Bacteroides fragilis HMW
616]
gi|313135839|gb|EFR53199.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
gi|404577156|gb|EKA81894.1| hypothetical protein HMPREF1205_03852 [Bacteroides fragilis HMW
616]
gi|404587105|gb|EKA91655.1| hypothetical protein HMPREF1203_00487 [Bacteroides fragilis HMW
610]
Length = 81
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 31/47 (65%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+++ + NL+YR DLR+V E G V + + DR TR+S+GFAFV
Sbjct: 1 MNMYIGNLSYRVKEADLRQVMEEYGTVDSVKLITDRETRKSKGFAFV 47
>gi|428320412|ref|YP_007118294.1| RNP-1 like RNA-binding protein [Oscillatoria nigro-viridis PCC
7112]
gi|428244092|gb|AFZ09878.1| RNP-1 like RNA-binding protein [Oscillatoria nigro-viridis PCC
7112]
Length = 106
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 28/47 (59%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+S+ V NL+Y T DDL VF G V + +P DR T RGFAFV
Sbjct: 1 MSIYVGNLSYEVTSDDLNEVFAEYGTVSRVQVPVDRETGRMRGFAFV 47
>gi|399216355|emb|CCF73043.1| unnamed protein product [Babesia microti strain RI]
Length = 298
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 31/46 (67%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
S+ V NL TTP+ +R FE+ GE+ D+Y+P D FT + RGF FV
Sbjct: 9 SVLVRNLLETTTPELVRETFEKFGEIRDVYLPTDFFTHKPRGFGFV 54
>gi|344338389|ref|ZP_08769321.1| RNP-1 like RNA-binding protein [Thiocapsa marina 5811]
gi|343801671|gb|EGV19613.1| RNP-1 like RNA-binding protein [Thiocapsa marina 5811]
Length = 90
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 29/47 (61%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+++ V NL Y T D+L+ F GE+ + + D+FT ES+GF FV
Sbjct: 1 MNIYVGNLAYGVTQDELKTAFSAYGEISSVNLITDKFTGESKGFGFV 47
>gi|355750652|gb|EHH54979.1| hypothetical protein EGM_04098, partial [Macaca fascicularis]
Length = 326
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 32/59 (54%)
Query: 2 SYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
S G P E + L + L++ TT D LR FE+ G + D + RD T+ SRGF FV
Sbjct: 1 SQGHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFV 59
>gi|441657453|ref|XP_004091180.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like
[Nomascus leucogenys]
Length = 379
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 32/57 (56%)
Query: 4 GRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
G P E + L + +L++ TT D LR FE+ G + D + RD T+ SRGF FV
Sbjct: 25 GHDPKEPEQLRKLFIGDLSFETTDDSLREYFEKWGTLTDCVVMRDAQTKRSRGFGFV 81
>gi|358056102|dbj|GAA97956.1| hypothetical protein E5Q_04636 [Mixia osmundae IAM 14324]
Length = 203
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 19/46 (41%), Positives = 32/46 (69%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
S+ V N+ Y TP++L+++F+ CG + + I D+FTR +GFA+V
Sbjct: 81 SIYVGNVDYGATPEELQQLFKDCGTINRVTILCDKFTRHPKGFAYV 126
>gi|32476441|ref|NP_869435.1| RNA-binding protein [Rhodopirellula baltica SH 1]
gi|32446986|emb|CAD78892.1| RNA-binding protein [Rhodopirellula baltica SH 1]
Length = 206
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 32/48 (66%)
Query: 13 MVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+ ++ V NL+++ T ++LR FE+ GEV + I DR T SRGFAFV
Sbjct: 65 VTNIYVGNLSFKATEEELRGAFEQYGEVSAVNIIMDRETGRSRGFAFV 112
>gi|340718466|ref|XP_003397688.1| PREDICTED: hypothetical protein LOC100643287 [Bombus terrestris]
Length = 379
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 11 EGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
E + L + L YRTT D L++ FE+ GE+ D+ + +D T+ SRGF F+
Sbjct: 14 EHVRKLFIGGLDYRTTDDSLKKHFEKWGEIVDVVVMKDPKTKRSRGFGFI 63
>gi|332298346|ref|YP_004440268.1| RNP-1 like RNA-binding protein [Treponema brennaborense DSM
12168]
gi|332181449|gb|AEE17137.1| RNP-1 like RNA-binding protein [Treponema brennaborense DSM
12168]
Length = 117
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 28/45 (62%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+ V NL YRTT D L F + GE+ + +D+FT +S+GF F+
Sbjct: 5 IYVGNLNYRTTEDTLSSAFSQYGEIVSAVVIKDKFTEQSKGFGFI 49
>gi|166367328|ref|YP_001659601.1| RNA-binding region protein [Microcystis aeruginosa NIES-843]
gi|425440525|ref|ZP_18820825.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC
9717]
gi|166089701|dbj|BAG04409.1| RNA-binding region protein [Microcystis aeruginosa NIES-843]
gi|389719028|emb|CCH97091.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC
9717]
Length = 100
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 29/47 (61%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+++ V NL Y T DDL+ VF G V +Y+P DR T + RGF FV
Sbjct: 1 MTIYVGNLVYDVTTDDLKEVFAEYGTVSRVYLPVDRETGKMRGFGFV 47
>gi|358332953|dbj|GAA51534.1| squamous cell carcinoma antigen recognized by T-cells 3 [Clonorchis
sinensis]
Length = 898
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 21/43 (48%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Query: 18 VDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
V NL Y TT DDLRR FE CG++ + + RD + S+G+A+V
Sbjct: 630 VSNLDYSTTEDDLRRTFEECGKLSSVRLVRD-YAGRSKGYAYV 671
>gi|110767982|ref|XP_624411.2| PREDICTED: hypothetical protein LOC552027 [Apis mellifera]
gi|380027797|ref|XP_003697603.1| PREDICTED: uncharacterized protein LOC100868777 [Apis florea]
Length = 378
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 11 EGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
E + L + L YRTT D L++ FE+ GE+ D+ + +D T+ SRGF F+
Sbjct: 14 EHVRKLFIGGLDYRTTDDSLKKHFEKWGEIVDVVVMKDPKTKRSRGFGFI 63
>gi|384483751|gb|EIE75931.1| hypothetical protein RO3G_00635 [Rhizopus delemar RA 99-880]
Length = 831
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 33/45 (73%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
L + NLTY T DDL+ VFE+ G + ++++P + T++S+G+A++
Sbjct: 360 LFIRNLTYACTEDDLKEVFEKYGTLSEVHMPIAKDTKKSKGYAYI 404
>gi|350401887|ref|XP_003486296.1| PREDICTED: hypothetical protein LOC100748395 [Bombus impatiens]
Length = 378
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 11 EGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
E + L + L YRTT D L++ FE+ GE+ D+ + +D T+ SRGF F+
Sbjct: 14 EHVRKLFIGGLDYRTTDDSLKKHFEKWGEIVDVVVMKDPKTKRSRGFGFI 63
>gi|225435731|ref|XP_002285703.1| PREDICTED: uncharacterized protein LOC100263951 [Vitis vinifera]
Length = 245
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 30/47 (63%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
SL V NL + +DLRR F + G + DIY+PRD +T E RGF FV
Sbjct: 38 TSLLVRNLRHDCRGEDLRRPFGQFGPLKDIYLPRDYYTGEPRGFGFV 84
>gi|221132895|ref|XP_002159009.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1-like [Hydra magnipapillata]
Length = 244
Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 23/61 (37%), Positives = 37/61 (60%), Gaps = 4/61 (6%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MS G P + ++ V NL + T +D+ +VFE+ G + + + RDR +RES+G AFV
Sbjct: 1 MSGGLAPSK----STVYVGNLPFSLTNNDIHKVFEKFGRIAKVTVLRDRVSRESKGVAFV 56
Query: 61 R 61
+
Sbjct: 57 Q 57
>gi|145338212|ref|NP_187353.2| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|91806393|gb|ABE65924.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332640961|gb|AEE74482.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 317
Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 20/43 (46%), Positives = 29/43 (67%)
Query: 18 VDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
V NLT+RTT DDLRR FE+ G+V D + + + S+G+ F+
Sbjct: 16 VGNLTWRTTADDLRRYFEQFGQVVDANVVSETYPGRSKGYGFI 58
>gi|443323178|ref|ZP_21052187.1| RRM domain-containing RNA-binding protein [Gloeocapsa sp. PCC
73106]
gi|442787088|gb|ELR96812.1| RRM domain-containing RNA-binding protein [Gloeocapsa sp. PCC
73106]
Length = 95
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 29/47 (61%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+S+ V NL Y+ T DL VF G V ++IP DR T +RGFAFV
Sbjct: 1 MSIYVGNLNYKVTDSDLNDVFAEYGTVKRVHIPTDRDTGRARGFAFV 47
>gi|4803739|dbj|BAA77512.1| cold-inducible RNA-binding protein [Ciona intestinalis]
Length = 158
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 28/43 (65%)
Query: 18 VDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
V NL+Y T DDLR+ F G+V ++ I DR T SRGFAFV
Sbjct: 8 VGNLSYNATEDDLRKHFSGSGQVEEVAIICDRETGRSRGFAFV 50
>gi|406834935|ref|ZP_11094529.1| RNP-1 like RNA-binding protein [Schlesneria paludicola DSM 18645]
Length = 123
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 27/46 (58%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+L V NL+Y T DDLR +F + G V + DR T SRGF FV
Sbjct: 4 NLYVGNLSYNCTADDLRELFSQHGNVSSAQVVSDRETGRSRGFGFV 49
>gi|443315198|ref|ZP_21044702.1| RRM domain-containing RNA-binding protein [Leptolyngbya sp. PCC
6406]
gi|442785209|gb|ELR95045.1| RRM domain-containing RNA-binding protein [Leptolyngbya sp. PCC
6406]
Length = 103
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 31/47 (65%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+S+ V NL+Y T +DL +VF+ GEV + +P DR T RGFAFV
Sbjct: 1 MSIYVGNLSYDVTREDLEQVFKEYGEVSRVSLPTDRETGRPRGFAFV 47
>gi|383855454|ref|XP_003703227.1| PREDICTED: uncharacterized protein LOC100883215 [Megachile
rotundata]
Length = 378
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 11 EGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
E + L + L YRTT D L++ FE+ GE+ D+ + +D T+ SRGF F+
Sbjct: 14 EHVRKLFIGGLDYRTTDDSLKKHFEKWGEIVDVVVMKDPKTKRSRGFGFI 63
>gi|334118602|ref|ZP_08492691.1| RNP-1 like RNA-binding protein [Microcoleus vaginatus FGP-2]
gi|333459609|gb|EGK88222.1| RNP-1 like RNA-binding protein [Microcoleus vaginatus FGP-2]
Length = 103
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 28/47 (59%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+S+ V NL+Y T DDL VF G V + +P DR T RGFAFV
Sbjct: 1 MSIYVGNLSYEVTSDDLNEVFAEYGTVSRVQVPMDRETGRMRGFAFV 47
>gi|443312655|ref|ZP_21042271.1| RRM domain-containing RNA-binding protein [Synechocystis sp. PCC
7509]
gi|442777374|gb|ELR87651.1| RRM domain-containing RNA-binding protein [Synechocystis sp. PCC
7509]
Length = 96
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 30/47 (63%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+++ V NL+YR T +DLR VF G + I +P DR T RGFAFV
Sbjct: 1 MTIYVGNLSYRATEEDLRTVFAEYGAIKRIVLPTDRETGRLRGFAFV 47
>gi|392332853|ref|XP_003752716.1| PREDICTED: regulator of G-protein signaling protein-like [Rattus
norvegicus]
Length = 1173
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 23/57 (40%), Positives = 31/57 (54%)
Query: 4 GRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
G P E + L + L++ TT D LR FE+ G + D + RD T+ SRGF FV
Sbjct: 719 GHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFV 775
>gi|428310915|ref|YP_007121892.1| RRM domain-containing RNA-binding protein [Microcoleus sp. PCC
7113]
gi|428252527|gb|AFZ18486.1| RRM domain-containing RNA-binding protein [Microcoleus sp. PCC
7113]
Length = 104
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 30/47 (63%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+S+ V NL+Y T +DL +F+ G VG + +P DR T RGFAFV
Sbjct: 1 MSIYVGNLSYEVTAEDLGEIFKEYGTVGRVQLPTDRETGRPRGFAFV 47
>gi|282896133|ref|ZP_06304159.1| RNA-binding region protein RNP-1 [Raphidiopsis brookii D9]
gi|281199051|gb|EFA73926.1| RNA-binding region protein RNP-1 [Raphidiopsis brookii D9]
Length = 98
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 28/47 (59%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+S+ V NL+Y T D L VF GEV + IP DR T RGFAFV
Sbjct: 1 MSVYVGNLSYEVTQDALTAVFSEYGEVKRVQIPTDRETGRVRGFAFV 47
>gi|189465498|ref|ZP_03014283.1| hypothetical protein BACINT_01856 [Bacteroides intestinalis DSM
17393]
gi|189437772|gb|EDV06757.1| hypothetical protein BACINT_01856 [Bacteroides intestinalis DSM
17393]
Length = 81
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 28/47 (59%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
++L V NL YR DLR V E G V + I DR TR S+GFAF+
Sbjct: 1 MNLYVGNLNYRVKESDLREVMEEYGTVDSVRIITDRETRRSKGFAFI 47
>gi|302835535|ref|XP_002949329.1| hypothetical protein VOLCADRAFT_36996 [Volvox carteri f.
nagariensis]
gi|300265631|gb|EFJ49822.1| hypothetical protein VOLCADRAFT_36996 [Volvox carteri f.
nagariensis]
Length = 124
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 25/39 (64%)
Query: 23 YRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
+ TT +LR++F CGEV D I DR T SRGF FV+
Sbjct: 8 HHTTEHELRQLFSTCGEVADCSIITDRHTGASRGFGFVK 46
>gi|422303993|ref|ZP_16391342.1| putative RNA-binding protein rbpB [Microcystis aeruginosa PCC
9806]
gi|425468337|ref|ZP_18847364.1| putative RNA-binding protein rbpB [Microcystis aeruginosa PCC
9701]
gi|389790955|emb|CCI13203.1| putative RNA-binding protein rbpB [Microcystis aeruginosa PCC
9806]
gi|389885016|emb|CCI34745.1| putative RNA-binding protein rbpB [Microcystis aeruginosa PCC
9701]
Length = 100
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 29/47 (61%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+++ V NL Y T DDL+ VF G V +Y+P DR T + RGF FV
Sbjct: 1 MTIYVGNLVYDVTTDDLKEVFAEYGTVSRVYLPVDRETGKMRGFGFV 47
>gi|354564693|ref|ZP_08983869.1| RNP-1 like RNA-binding protein [Fischerella sp. JSC-11]
gi|353549819|gb|EHC19258.1| RNP-1 like RNA-binding protein [Fischerella sp. JSC-11]
Length = 103
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 29/47 (61%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+S+ V NL+Y DDL++VF G V + +P DR T RGFAFV
Sbjct: 1 MSIYVGNLSYEVEQDDLKQVFSEYGTVKSVQLPVDRETGRVRGFAFV 47
>gi|301106558|ref|XP_002902362.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262098982|gb|EEY57034.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 373
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFER-CGEVGDIYIPRDRFTRESRGFAFV 60
+SL V NL+ TT D+LRR F R G++ D+YIP++ + RGFAF+
Sbjct: 111 ISLLVRNLSPDTTGDELRRAFSRRAGDILDVYIPKEYSSNRPRGFAFI 158
>gi|442761097|gb|JAA72707.1| Putative splicing factor sc35, partial [Ixodes ricinus]
Length = 226
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 35/59 (59%), Gaps = 5/59 (8%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
Y RPP SL + N+ T P+DLR +F + G + D+YIP D + R RGFA+V+
Sbjct: 26 YSRPP-----NSSLFIRNVPDGTRPEDLRSLFGKYGPITDVYIPVDYYARRPRGFAYVQ 79
>gi|22902265|gb|AAH37591.1| FUS interacting protein (serine-arginine rich) 1 [Mus musculus]
Length = 261
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 35/59 (59%), Gaps = 5/59 (8%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
Y RPP SL V N+ T +DLRR F R G + D+Y+P D +TR RGFA+V+
Sbjct: 4 YLRPP-----NTSLFVRNVADDTQSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQ 57
>gi|332708830|ref|ZP_08428801.1| RRM domain RNA-binding protein [Moorea producens 3L]
gi|332352372|gb|EGJ31941.1| RRM domain RNA-binding protein [Moorea producens 3L]
Length = 100
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 30/47 (63%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+S+ V NL T +DL+ VFE GE+ I++P DR T RGFAFV
Sbjct: 1 MSVYVGNLAREVTEEDLKSVFEEYGEIKRIHMPTDRETGRLRGFAFV 47
>gi|282890465|ref|ZP_06298988.1| hypothetical protein pah_c022o030 [Parachlamydia acanthamoebae
str. Hall's coccus]
gi|281499462|gb|EFB41758.1| hypothetical protein pah_c022o030 [Parachlamydia acanthamoebae
str. Hall's coccus]
Length = 113
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 30/43 (69%)
Query: 18 VDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
V NL+++ T D LR VFE+ G+V + I D++T +S+GF FV
Sbjct: 9 VGNLSWKVTDDILRSVFEKIGKVVSVKIITDQYTGKSKGFGFV 51
>gi|409047364|gb|EKM56843.1| hypothetical protein PHACADRAFT_254184 [Phanerochaete carnosa
HHB-10118-sp]
Length = 287
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 35/59 (59%)
Query: 2 SYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
S GRP + + +L+V N++ T +DLR +F G V +Y+ RDR T +GFAFV
Sbjct: 193 SMGRPGGSRDDLPTLRVTNISEDTQENDLRDLFGAFGRVARVYVGRDRETGAGKGFAFV 251
>gi|403255345|ref|XP_003920400.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like
[Saimiri boliviensis boliviensis]
Length = 320
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 33/60 (55%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MS P +E + L + L++ TT + LR FE+ G + D + RD T+ SRGF FV
Sbjct: 1 MSKSESPKELEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFV 60
>gi|338175402|ref|YP_004652212.1| hypothetical protein PUV_14080 [Parachlamydia acanthamoebae UV-7]
gi|336479760|emb|CCB86358.1| putative uncharacterized protein [Parachlamydia acanthamoebae
UV-7]
Length = 111
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 30/43 (69%)
Query: 18 VDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
V NL+++ T D LR VFE+ G+V + I D++T +S+GF FV
Sbjct: 7 VGNLSWKVTDDILRSVFEKIGKVVSVKIITDQYTGKSKGFGFV 49
>gi|260814928|ref|XP_002602165.1| hypothetical protein BRAFLDRAFT_268357 [Branchiostoma floridae]
gi|229287472|gb|EEN58177.1| hypothetical protein BRAFLDRAFT_268357 [Branchiostoma floridae]
Length = 224
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 37/60 (61%), Gaps = 4/60 (6%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MS G P + ++ V NL + T +DL ++FE+ G+V + + RD+ TR+S+G AFV
Sbjct: 1 MSGGLAPSK----TTVYVSNLPFALTNNDLHKIFEKYGKVVKVTVMRDKITRQSKGVAFV 56
>gi|355565001|gb|EHH21490.1| hypothetical protein EGK_04572, partial [Macaca mulatta]
Length = 357
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 32/59 (54%)
Query: 2 SYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
S G P E + L + L++ TT D LR FE+ G + D + RD T+ SRGF FV
Sbjct: 1 SQGHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFV 59
>gi|449432785|ref|XP_004134179.1| PREDICTED: uncharacterized protein LOC101216537 [Cucumis sativus]
gi|449495419|ref|XP_004159835.1| PREDICTED: uncharacterized LOC101216537 [Cucumis sativus]
Length = 248
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 30/46 (65%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
L V NL P+DLR FER G V D+Y+P++ +T E RGF FV+
Sbjct: 52 LLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYTGEPRGFGFVK 97
>gi|386346963|ref|YP_006045212.1| RNP-1 like RNA-binding protein [Spirochaeta thermophila DSM 6578]
gi|339411930|gb|AEJ61495.1| RNP-1 like RNA-binding protein [Spirochaeta thermophila DSM 6578]
Length = 100
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 29/43 (67%)
Query: 18 VDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
V NL Y+TT D LR++FE+ GEV + I DR + S+GF FV
Sbjct: 7 VGNLNYQTTEDTLRQLFEQYGEVESVKIITDRDSGFSKGFGFV 49
>gi|153874940|ref|ZP_02002958.1| RNA-binding protein [Beggiatoa sp. PS]
gi|152068596|gb|EDN67042.1| RNA-binding protein [Beggiatoa sp. PS]
Length = 89
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 32/47 (68%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+++ V NL+Y T ++L+ +F GE+ + + D++T +S+GFAFV
Sbjct: 1 MNIYVGNLSYSMTEEELKEIFTEYGEISTVNLITDKYTGQSKGFAFV 47
>gi|121705230|ref|XP_001270878.1| glycine-rich RNA-binding protein, putative [Aspergillus clavatus
NRRL 1]
gi|119399024|gb|EAW09452.1| glycine-rich RNA-binding protein, putative [Aspergillus clavatus
NRRL 1]
Length = 133
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 30/49 (61%)
Query: 13 MVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
M L + L + TT D LR+ FE+ G+V + + +DR T SRGF FVR
Sbjct: 1 MSKLFIGGLAWHTTDDALRQGFEQFGQVEEAIVVKDRDTNRSRGFGFVR 49
>gi|307718869|ref|YP_003874401.1| hypothetical protein STHERM_c11870 [Spirochaeta thermophila DSM
6192]
gi|306532594|gb|ADN02128.1| hypothetical protein STHERM_c11870 [Spirochaeta thermophila DSM
6192]
Length = 100
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 29/43 (67%)
Query: 18 VDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
V NL Y+TT D LR++FE+ GEV + I DR + S+GF FV
Sbjct: 7 VGNLNYQTTEDTLRQLFEQYGEVESVKIITDRDSGFSKGFGFV 49
>gi|427740185|ref|YP_007059729.1| RRM domain-containing RNA-binding protein [Rivularia sp. PCC
7116]
gi|427375226|gb|AFY59182.1| RRM domain-containing RNA-binding protein [Rivularia sp. PCC
7116]
Length = 95
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 29/47 (61%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+S+ V NL+Y T +DL +VF G V + +P DR T SRGF FV
Sbjct: 1 MSIYVGNLSYDVTQEDLSKVFAEYGSVKRVQLPTDRETGRSRGFGFV 47
>gi|195055059|ref|XP_001994440.1| GH17116 [Drosophila grimshawi]
gi|193892203|gb|EDV91069.1| GH17116 [Drosophila grimshawi]
Length = 379
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 11 EGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
E M L + L YRTT D+L+ FE+ G++ D+ + +D T+ SRGF F+
Sbjct: 24 EHMRKLFIGGLDYRTTDDNLKAHFEKWGQIVDVVVMKDPRTKRSRGFGFI 73
>gi|221057297|ref|XP_002259786.1| Arg-rich splicing factor [Plasmodium knowlesi strain H]
gi|193809858|emb|CAQ40562.1| Arg-rich splicing factor, putative [Plasmodium knowlesi strain H]
Length = 327
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 31/47 (65%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+SL + L Y T+P +R F+R G + D+Y+P D +T+E RGF FV
Sbjct: 12 MSLLIRKLKYDTSPSMVREKFKRFGAIKDVYLPIDYYTKEPRGFGFV 58
>gi|222629430|gb|EEE61562.1| hypothetical protein OsJ_15917 [Oryza sativa Japonica Group]
Length = 149
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 6 PPPRIEGMVS-LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
PP G S L V L++RTT + LR FER G++ ++ + +R + RGFAF+
Sbjct: 58 PPSASHGAASRLYVSGLSFRTTEESLRNAFERFGQLTEVNLVMERVAKRPRGFAFL 113
>gi|66809481|ref|XP_638463.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|74996868|sp|Q54PB2.1|MRD1_DICDI RecName: Full=Multiple RNA-binding domain-containing protein 1;
AltName: Full=RNA-binding motif protein 19 homolog;
AltName: Full=RNA-binding protein 19 homolog
gi|60467060|gb|EAL65101.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 895
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 18/43 (41%), Positives = 31/43 (72%)
Query: 18 VDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
V NL+Y T +DL +VF + G++ +I+IP D +++S+G AF+
Sbjct: 365 VRNLSYSTKEEDLEKVFSKFGKISEIHIPIDYDSKKSKGIAFI 407
>gi|449488891|ref|XP_004174435.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 10 [Taeniopygia guttata]
Length = 262
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 35/59 (59%), Gaps = 5/59 (8%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
Y RPP SL V N+ T +DLRR F R G + D+Y+P D +TR RGFA+V+
Sbjct: 4 YMRPP-----XTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQ 57
>gi|427734808|ref|YP_007054352.1| RRM domain-containing RNA-binding protein [Rivularia sp. PCC
7116]
gi|427369849|gb|AFY53805.1| RRM domain-containing RNA-binding protein [Rivularia sp. PCC
7116]
Length = 98
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 30/47 (63%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+++ V NL+YR T DLR VF GEV + +P DR T RGFAFV
Sbjct: 1 MTIYVGNLSYRATEADLRAVFTDYGEVTRVVLPTDRETGRMRGFAFV 47
>gi|15239676|ref|NP_200269.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|9758950|dbj|BAB09337.1| unnamed protein product [Arabidopsis thaliana]
gi|18175762|gb|AAL59923.1| unknown protein [Arabidopsis thaliana]
gi|20465513|gb|AAM20239.1| unknown protein [Arabidopsis thaliana]
gi|21553374|gb|AAM62467.1| unknown [Arabidopsis thaliana]
gi|332009129|gb|AED96512.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 156
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 31/54 (57%)
Query: 8 PRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
P+ E +L V L+ RTT + LR F + GEV D + DR + S+GF FVR
Sbjct: 50 PQAEPSTNLFVSGLSKRTTSEGLRTAFAQFGEVADAKVVTDRVSGYSKGFGFVR 103
>gi|427415488|ref|ZP_18905672.1| RRM domain-containing RNA-binding protein [Leptolyngbya sp. PCC
7375]
gi|425756163|gb|EKU97020.1| RRM domain-containing RNA-binding protein [Leptolyngbya sp. PCC
7375]
Length = 90
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 29/47 (61%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+S+ V NL+Y T +DL VF G V +++P DR T RGFAFV
Sbjct: 1 MSIYVGNLSYDATNEDLTAVFAEYGTVKSVHLPTDRETGRMRGFAFV 47
>gi|395854840|ref|XP_003799887.1| PREDICTED: serine/arginine-rich splicing factor 10 [Otolemur
garnettii]
Length = 221
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 35/59 (59%), Gaps = 5/59 (8%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
Y RPP SL V N+ T +DLRR F R G + D+Y+P D +TR RGFA+V+
Sbjct: 4 YLRPP-----NTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQ 57
>gi|427416011|ref|ZP_18906194.1| RRM domain-containing RNA-binding protein [Leptolyngbya sp. PCC
7375]
gi|425758724|gb|EKU99576.1| RRM domain-containing RNA-binding protein [Leptolyngbya sp. PCC
7375]
Length = 98
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 32/47 (68%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+++ V NL+++ T DD+R VF GEV I +P DR T + RGFAF+
Sbjct: 1 MTIYVGNLSFQATEDDIRDVFVEYGEVARITLPVDRETGKRRGFAFI 47
>gi|17231514|ref|NP_488062.1| RNA-binding protein [Nostoc sp. PCC 7120]
gi|75907900|ref|YP_322196.1| RNA-binding region RNP-1 [Anabaena variabilis ATCC 29413]
gi|81818528|sp|Q44556.3|RBPD_NOSS1 RecName: Full=Putative RNA-binding protein RbpD
gi|1064779|dbj|BAA08403.1| RNA-binding protein [Anabaena variabilis]
gi|17133157|dbj|BAB75721.1| RNA-binding protein [Nostoc sp. PCC 7120]
gi|75701625|gb|ABA21301.1| RNA-binding region RNP-1 [Anabaena variabilis ATCC 29413]
Length = 94
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 30/47 (63%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+++ V NL+YR T DL+ VF GEV + +P DR T RGFAFV
Sbjct: 1 MTIYVGNLSYRATEADLKAVFADYGEVKRVVLPTDRETGRMRGFAFV 47
>gi|363735855|ref|XP_003641619.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 homolog
1-like [Gallus gallus]
Length = 386
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 33/60 (55%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
++ G P E + L + L++ TT D LR FE+ G + D + RD T+ SRGF FV
Sbjct: 28 LNKGHEPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFV 87
>gi|449016425|dbj|BAM79827.1| eukaryotic translation initiation factor eIF-3 subunit G
[Cyanidioschyzon merolae strain 10D]
Length = 364
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
S+++ NLT T DDLR++ E G V IY+ RD++T +GFAF
Sbjct: 272 SIRISNLTEGATEDDLRQLLEPFGRVVRIYLARDKYTGAPKGFAFA 317
>gi|297792921|ref|XP_002864345.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
gi|297310180|gb|EFH40604.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 156
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 31/54 (57%)
Query: 8 PRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
P+ E +L V L+ RTT + LR F + GEV D + DR + S+GF FVR
Sbjct: 50 PQAEPSTNLFVSGLSKRTTSEGLRTAFAQFGEVADAKVVTDRVSGYSKGFGFVR 103
>gi|15982706|gb|AAL09839.1| RNA binding protein [Bacteroides fragilis 638R]
Length = 80
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 31/47 (65%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+++ + NL+YR DLR+V E G V + + DR TR+S+GFAFV
Sbjct: 1 MNMYIGNLSYRVKEADLRQVMEEYGTVDSVKLIIDRETRKSKGFAFV 47
>gi|82541600|ref|XP_725030.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23479883|gb|EAA16595.1| PR264 [Plasmodium yoelii yoelii]
Length = 121
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 5/59 (8%)
Query: 2 SYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
S RP P +SL + L + T+P +R F++ G + D+Y+P D +T+E RGF FV
Sbjct: 5 SSQRPQP-----MSLLIRKLKFNTSPSMVRDKFKKFGAIKDVYLPIDYYTKEPRGFGFV 58
>gi|449506755|ref|XP_002199353.2| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 homolog
1-like [Taeniopygia guttata]
Length = 385
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 33/60 (55%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
++ G P E + L + L++ TT D LR FE+ G + D + RD T+ SRGF FV
Sbjct: 27 LNKGHEPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFV 86
>gi|444509175|gb|ELV09196.1| Heterogeneous nuclear ribonucleoprotein A1 [Tupaia chinensis]
Length = 346
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 33/60 (55%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MS P +E + L + L++ TT + LR FE+ G + D + RD T+ SRGF FV
Sbjct: 1 MSKSESPKELEQLRKLFIGGLSFETTDESLRSHFEQRGTLTDCVVMRDPNTKHSRGFGFV 60
>gi|126654754|ref|ZP_01726288.1| RNA-binding region RNP-1 [Cyanothece sp. CCY0110]
gi|126623489|gb|EAZ94193.1| RNA-binding region RNP-1 [Cyanothece sp. CCY0110]
Length = 97
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 30/47 (63%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+S+ V NL+Y T +DL VF G+V ++IP DR T RGFAFV
Sbjct: 1 MSIYVGNLSYDVTKEDLSEVFTDYGQVKRVHIPTDRDTGRMRGFAFV 47
>gi|226533389|ref|NP_001034357.2| RNA binding motif protein 19 [Gallus gallus]
Length = 957
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 31/45 (68%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
L V NL + +T +DL ++F + G + +I+ P DR T++ +GFAF+
Sbjct: 416 LFVRNLPFTSTEEDLEKIFSKYGPLSEIHFPIDRLTKKPKGFAFI 460
>gi|440684571|ref|YP_007159366.1| putative transcriptional regulator [Anabaena cylindrica PCC 7122]
gi|428681690|gb|AFZ60456.1| putative transcriptional regulator [Anabaena cylindrica PCC 7122]
Length = 604
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 18/43 (41%), Positives = 28/43 (65%)
Query: 18 VDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+ N+ + DL +F + GE+ D+Y+P+DR T +SRGFA V
Sbjct: 529 IGNVDFNADEQDLETLFSQFGEISDVYLPKDRMTGKSRGFAIV 571
>gi|225451102|ref|XP_002265951.1| PREDICTED: uncharacterized protein LOC100262434 [Vitis vinifera]
gi|298205010|emb|CBI34317.3| unnamed protein product [Vitis vinifera]
Length = 287
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 30/46 (65%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
L V N+ P+DLR FER G V D+Y+P++ +T E RGF FV+
Sbjct: 46 LLVRNIALDARPEDLRVPFERFGPVKDVYLPKNYYTGEPRGFGFVK 91
>gi|428210291|ref|YP_007094644.1| RNP-1 like RNA-binding protein [Chroococcidiopsis thermalis PCC
7203]
gi|428012212|gb|AFY90775.1| RNP-1 like RNA-binding protein [Chroococcidiopsis thermalis PCC
7203]
Length = 101
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 29/47 (61%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+S+ V NL+Y TP+DL F + G V + +P DR T RGFAFV
Sbjct: 1 MSIYVGNLSYEVTPEDLSAAFAQYGSVKRVQLPTDRETGRVRGFAFV 47
>gi|332017443|gb|EGI58166.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1-like protein
[Acromyrmex echinatior]
Length = 407
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 11 EGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
E + L + L YRTT D L++ FE+ GE+ D+ + +D T+ SRGF F+
Sbjct: 45 EHVRKLFIGGLDYRTTDDSLKKHFEQWGEIVDVVVMKDPKTKRSRGFGFI 94
>gi|6729004|gb|AAF27001.1|AC016827_12 putative RNA-binding protein [Arabidopsis thaliana]
Length = 272
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 20/43 (46%), Positives = 29/43 (67%)
Query: 18 VDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
V NLT+RTT DDLRR FE+ G+V D + + + S+G+ F+
Sbjct: 16 VGNLTWRTTADDLRRYFEQFGQVVDANVVSETYPGRSKGYGFI 58
>gi|402219166|gb|EJT99240.1| eukaryotic translation initiation factor 3 [Dacryopinax sp. DJM-731
SS1]
Length = 297
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 32/50 (64%)
Query: 11 EGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
E M +L+V NL+ DDLR +F+R G V ++I RDR T +G+AFV
Sbjct: 209 EDMPTLRVTNLSEDAEEDDLRDLFQRFGRVARVFIGRDRETGVGKGYAFV 258
>gi|428203936|ref|YP_007082525.1| RRM domain-containing RNA-binding protein [Pleurocapsa sp. PCC
7327]
gi|427981368|gb|AFY78968.1| RRM domain-containing RNA-binding protein [Pleurocapsa sp. PCC
7327]
Length = 97
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 28/47 (59%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+S+ V NL+Y T DL VF G V ++IP DR T RGFAFV
Sbjct: 1 MSIFVGNLSYEVTQADLNSVFAEYGSVKRVHIPTDRETGRMRGFAFV 47
>gi|344342838|ref|ZP_08773708.1| RNP-1 like RNA-binding protein [Marichromatium purpuratum 984]
gi|343805390|gb|EGV23286.1| RNP-1 like RNA-binding protein [Marichromatium purpuratum 984]
Length = 90
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 30/48 (62%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
+++ V NL Y T ++L+ VF GE+ + + D+FT ES+GF FV
Sbjct: 1 MNIYVGNLAYGVTQEELQAVFAAYGEISSVNLITDKFTGESKGFGFVE 48
>gi|322799899|gb|EFZ21040.1| hypothetical protein SINV_06138 [Solenopsis invicta]
Length = 373
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 11 EGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
E + L + L YRTT D L++ FE+ GE+ D+ + +D T+ SRGF F+
Sbjct: 7 EHVRKLFIGGLDYRTTDDSLKKHFEQWGEIVDVVVMKDPKTKRSRGFGFI 56
>gi|423225541|ref|ZP_17212008.1| hypothetical protein HMPREF1062_04194 [Bacteroides
cellulosilyticus CL02T12C19]
gi|392632469|gb|EIY26429.1| hypothetical protein HMPREF1062_04194 [Bacteroides
cellulosilyticus CL02T12C19]
Length = 129
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 29/48 (60%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
+++ V NL++ T D L+ +F + GEV YI DR T SRGF FV
Sbjct: 1 MNIYVANLSWNTNSDSLQELFSQYGEVTSAYIINDRETGRSRGFGFVE 48
>gi|224539725|ref|ZP_03680264.1| hypothetical protein BACCELL_04634 [Bacteroides cellulosilyticus
DSM 14838]
gi|224518648|gb|EEF87753.1| hypothetical protein BACCELL_04634 [Bacteroides cellulosilyticus
DSM 14838]
Length = 130
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 29/48 (60%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
+++ V NL++ T D L+ +F + GEV YI DR T SRGF FV
Sbjct: 1 MNIYVANLSWNTNSDSLQELFSQYGEVTSAYIINDRETGRSRGFGFVE 48
>gi|443723982|gb|ELU12200.1| hypothetical protein CAPTEDRAFT_225018 [Capitella teleta]
Length = 891
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
L V NL Y DDL ++F + G + ++++P D FT++ +GFAFV
Sbjct: 367 LYVRNLAYCCKEDDLEQLFTKYGTLSEVHLPIDSFTKKVKGFAFV 411
>gi|115486805|ref|NP_001068546.1| Os11g0704700 [Oryza sativa Japonica Group]
gi|62733154|gb|AAX95271.1| RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain), putative
[Oryza sativa Japonica Group]
gi|77552711|gb|ABA95508.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113645768|dbj|BAF28909.1| Os11g0704700 [Oryza sativa Japonica Group]
Length = 502
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 31/49 (63%)
Query: 12 GMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
VSL V NL P+D++ F++ G V D+Y+P+D T E RGFAFV
Sbjct: 33 AAVSLFVSNLPRSCRPEDVQVPFQKFGPVRDVYLPKDYNTGEPRGFAFV 81
>gi|53713556|ref|YP_099548.1| RNA binding protein [Bacteroides fragilis YCH46]
gi|60681841|ref|YP_211985.1| RNA binding protein [Bacteroides fragilis NCTC 9343]
gi|265763881|ref|ZP_06092449.1| RNA binding protein [Bacteroides sp. 2_1_16]
gi|375358652|ref|YP_005111424.1| RNA binding protein [Bacteroides fragilis 638R]
gi|383118522|ref|ZP_09939263.1| hypothetical protein BSHG_2523 [Bacteroides sp. 3_2_5]
gi|423250156|ref|ZP_17231172.1| hypothetical protein HMPREF1066_02182 [Bacteroides fragilis
CL03T00C08]
gi|423255659|ref|ZP_17236588.1| hypothetical protein HMPREF1067_03232 [Bacteroides fragilis
CL03T12C07]
gi|423257283|ref|ZP_17238206.1| hypothetical protein HMPREF1055_00483 [Bacteroides fragilis
CL07T00C01]
gi|423265747|ref|ZP_17244750.1| hypothetical protein HMPREF1056_02437 [Bacteroides fragilis
CL07T12C05]
gi|423271518|ref|ZP_17250488.1| hypothetical protein HMPREF1079_03570 [Bacteroides fragilis
CL05T00C42]
gi|423275577|ref|ZP_17254521.1| hypothetical protein HMPREF1080_03174 [Bacteroides fragilis
CL05T12C13]
gi|423284355|ref|ZP_17263239.1| hypothetical protein HMPREF1204_02777 [Bacteroides fragilis HMW
615]
gi|52216421|dbj|BAD49014.1| RNA binding protein [Bacteroides fragilis YCH46]
gi|60493275|emb|CAH08059.1| RNA binding protein [Bacteroides fragilis NCTC 9343]
gi|251945827|gb|EES86234.1| hypothetical protein BSHG_2523 [Bacteroides sp. 3_2_5]
gi|263256489|gb|EEZ27835.1| RNA binding protein [Bacteroides sp. 2_1_16]
gi|301163333|emb|CBW22883.1| RNA binding protein [Bacteroides fragilis 638R]
gi|387778759|gb|EIK40854.1| hypothetical protein HMPREF1055_00483 [Bacteroides fragilis
CL07T00C01]
gi|392650452|gb|EIY44120.1| hypothetical protein HMPREF1067_03232 [Bacteroides fragilis
CL03T12C07]
gi|392653731|gb|EIY47383.1| hypothetical protein HMPREF1066_02182 [Bacteroides fragilis
CL03T00C08]
gi|392697214|gb|EIY90400.1| hypothetical protein HMPREF1079_03570 [Bacteroides fragilis
CL05T00C42]
gi|392701244|gb|EIY94403.1| hypothetical protein HMPREF1080_03174 [Bacteroides fragilis
CL05T12C13]
gi|392703405|gb|EIY96549.1| hypothetical protein HMPREF1056_02437 [Bacteroides fragilis
CL07T12C05]
gi|404580023|gb|EKA84735.1| hypothetical protein HMPREF1204_02777 [Bacteroides fragilis HMW
615]
Length = 81
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 31/47 (65%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+++ + NL+YR DLR+V E G V + + DR TR+S+GFAFV
Sbjct: 1 MNMYIGNLSYRVKEADLRQVMEEYGTVDSVKLIIDRETRKSKGFAFV 47
>gi|242040845|ref|XP_002467817.1| hypothetical protein SORBIDRAFT_01g034590 [Sorghum bicolor]
gi|241921671|gb|EER94815.1| hypothetical protein SORBIDRAFT_01g034590 [Sorghum bicolor]
Length = 190
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 31/46 (67%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
L + N++ P+D+R FE+ G + D+Y+PR+ TRE RGF FV+
Sbjct: 59 LLIRNISLTARPEDIRVPFEQFGPIKDVYLPRNFHTRELRGFGFVK 104
>gi|427708129|ref|YP_007050506.1| RNP-1 like RNA-binding protein [Nostoc sp. PCC 7107]
gi|427360634|gb|AFY43356.1| RNP-1 like RNA-binding protein [Nostoc sp. PCC 7107]
Length = 99
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 30/47 (63%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+++ V NL+YR T DL+ VF GEV + +P DR T RGFAFV
Sbjct: 1 MTIYVGNLSYRATEADLKAVFADYGEVKRVVLPTDRETGRMRGFAFV 47
>gi|218195435|gb|EEC77862.1| hypothetical protein OsI_17125 [Oryza sativa Indica Group]
Length = 152
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 6 PPPRIEGMVS-LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
PP G S L V L++RTT + LR FER G++ ++ + +R + RGFAF+
Sbjct: 61 PPSASHGAASRLYVSGLSFRTTEESLRNAFERFGQLTEVNLVMERVAKRPRGFAFL 116
>gi|300360554|ref|NP_001177938.1| serine/arginine-rich splicing factor 10 isoform 6 [Homo sapiens]
gi|332266733|ref|XP_003282352.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Nomascus
leucogenys]
gi|332807985|ref|XP_001166490.2| PREDICTED: uncharacterized protein LOC456627 isoform 4 [Pan
troglodytes]
gi|344287392|ref|XP_003415437.1| PREDICTED: serine/arginine-rich splicing factor 10-like isoform 3
[Loxodonta africana]
gi|345793665|ref|XP_866416.2| PREDICTED: serine/arginine-rich splicing factor 10 isoform 5
[Canis lupus familiaris]
gi|403287346|ref|XP_003934910.1| PREDICTED: serine/arginine-rich splicing factor 10 [Saimiri
boliviensis boliviensis]
gi|410170861|ref|XP_003960063.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Homo
sapiens]
gi|426328343|ref|XP_004024962.1| PREDICTED: serine/arginine-rich splicing factor 10 [Gorilla
gorilla gorilla]
gi|194382312|dbj|BAG58911.1| unnamed protein product [Homo sapiens]
gi|410223012|gb|JAA08725.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
Length = 165
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 35/59 (59%), Gaps = 5/59 (8%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
Y RPP SL V N+ T +DLRR F R G + D+Y+P D +TR RGFA+V+
Sbjct: 4 YLRPP-----NTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQ 57
>gi|195158385|ref|XP_002020072.1| GL13791 [Drosophila persimilis]
gi|194116841|gb|EDW38884.1| GL13791 [Drosophila persimilis]
Length = 431
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 11 EGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
E M L + L YRTT D+L+ FE+ G++ D+ + +D T+ SRGF F+
Sbjct: 23 EHMRKLFIGGLDYRTTDDNLKAHFEKWGQIVDVVVMKDPRTKRSRGFGFI 72
>gi|167392444|ref|XP_001740157.1| RNA-binding protein SGN1 [Entamoeba dispar SAW760]
gi|165895835|gb|EDR23424.1| RNA-binding protein SGN1, putative [Entamoeba dispar SAW760]
Length = 135
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 30/46 (65%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
S+ V N+ Y TT DDL +FE+CG + ++ IP + FT+ G+A +
Sbjct: 40 SIHVSNVEYSTTKDDLEDLFEKCGIILNVNIPINYFTQTPMGYANI 85
>gi|74141008|dbj|BAE22085.1| unnamed protein product [Mus musculus]
Length = 278
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 35/59 (59%), Gaps = 5/59 (8%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
Y RPP SL V N+ T +DLRR F R G + D+Y+P D +TR RGFA+V+
Sbjct: 4 YLRPP-----NTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQ 57
>gi|406988412|gb|EKE08420.1| RNP-1 like protein RNA-binding protein [uncultured bacterium]
Length = 123
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 29/46 (63%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
L V NL + + D +R +F GEV ++ I DRF+ SRGFAFVR
Sbjct: 8 LYVGNLNFDASEDQVRELFGSYGEVQEVKIIMDRFSGRSRGFAFVR 53
>gi|1666299|emb|CAA63557.1| RNA-binding protein [Anabaena variabilis]
Length = 102
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 30/48 (62%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
+S+ V NL+Y T +DL+ VF G V + +P+DR T RGFAFV
Sbjct: 1 MSIYVGNLSYEVTENDLKGVFAEYGTVKRVQVPQDRETGRPRGFAFVE 48
>gi|223999513|ref|XP_002289429.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220974637|gb|EED92966.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 77
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 28/45 (62%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
L V NL++ T LR +FE G V D YIP DR T + RGFAF+
Sbjct: 1 LYVGNLSWGTEEGALRELFEEYGRVIDCYIPVDRETGQHRGFAFI 45
>gi|17230269|ref|NP_486817.1| RNA binding protein [Nostoc sp. PCC 7120]
gi|81859084|sp|Q9WX37.3|RBPE_NOSS1 RecName: Full=Putative RNA-binding protein RbpE
gi|4850342|dbj|BAA77711.1| RNA binding protein [Anabaena variabilis]
gi|17131870|dbj|BAB74476.1| RNA binding protein [Nostoc sp. PCC 7120]
Length = 99
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 28/47 (59%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+S+ V NL+Y T DDL +VF G V + +P DR T RGF FV
Sbjct: 1 MSIYVGNLSYSVTQDDLTKVFSEYGSVTRVQLPTDRETGRVRGFGFV 47
>gi|425434850|ref|ZP_18815314.1| putative RNA-binding protein rbpA [Microcystis aeruginosa PCC
9432]
gi|389675574|emb|CCH95321.1| putative RNA-binding protein rbpA [Microcystis aeruginosa PCC
9432]
Length = 97
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 31/47 (65%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+S+ V NL+Y + DDL VF+ G+V ++IP D+ T RGFAFV
Sbjct: 1 MSIFVGNLSYEISQDDLVEVFQDYGKVQRVHIPVDKETGRKRGFAFV 47
>gi|74096251|ref|NP_001027768.1| glycine rich RNA binding protein [Ciona intestinalis]
gi|5911800|emb|CAB56042.1| glycine rich RNA binding protein [Ciona intestinalis]
Length = 162
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 28/43 (65%)
Query: 18 VDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
V NL+Y T DDLR+ F G+V ++ I DR T SRGFAFV
Sbjct: 8 VGNLSYNATEDDLRKHFSGSGQVEEVAIICDRETGRSRGFAFV 50
>gi|147905111|ref|NP_001081320.1| heterogeneous nuclear ribonucleoprotein A3 homolog 2 [Xenopus
laevis]
gi|1710626|sp|P51992.1|RO32_XENLA RecName: Full=Heterogeneous nuclear ribonucleoprotein A3 homolog
2; AltName: Full=hnRNP A3(B)
gi|214747|gb|AAA49950.1| ribonucleoprotein [Xenopus laevis]
Length = 385
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 32/57 (56%)
Query: 4 GRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
G P E + L + L++ TT D LR FE+ G++ D + RD T+ SRGF FV
Sbjct: 17 GHEPKEPEQLRKLFIGGLSFETTDDSLREHFEQWGKLTDCVVMRDPQTKRSRGFGFV 73
>gi|427706332|ref|YP_007048709.1| RNP-1 like RNA-binding protein [Nostoc sp. PCC 7107]
gi|427358837|gb|AFY41559.1| RNP-1 like RNA-binding protein [Nostoc sp. PCC 7107]
Length = 110
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+S+ V NL+Y+ T +DL+ F G+V + +P DR T RGFAFV
Sbjct: 1 MSIYVGNLSYQVTEEDLKMAFSEYGKVSRVQLPTDRETGRPRGFAFV 47
>gi|75906252|ref|YP_320548.1| RNA-binding region RNP-1 [Anabaena variabilis ATCC 29413]
gi|75699977|gb|ABA19653.1| RNA-binding region RNP-1 [Anabaena variabilis ATCC 29413]
Length = 99
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 28/47 (59%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+S+ V NL+Y T DDL +VF G V + +P DR T RGF FV
Sbjct: 1 MSIYVGNLSYSVTQDDLTKVFSEYGSVTRVQLPTDRETGRVRGFGFV 47
>gi|148228969|ref|NP_001088073.1| RNA binding motif protein 19 [Xenopus laevis]
gi|52354760|gb|AAH82875.1| LOC494769 protein [Xenopus laevis]
Length = 920
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 29/45 (64%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
L V NL Y T DDL ++F + G + +I+ P D T++ +GFAFV
Sbjct: 388 LFVRNLPYSCTEDDLDKLFSKYGPISEIHFPIDSLTKKPKGFAFV 432
>gi|434392800|ref|YP_007127747.1| RNP-1 like RNA-binding protein [Gloeocapsa sp. PCC 7428]
gi|428264641|gb|AFZ30587.1| RNP-1 like RNA-binding protein [Gloeocapsa sp. PCC 7428]
Length = 103
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 31/47 (65%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+S+ V NL+Y+ +DL++VF G+V + +P DR T RGFAFV
Sbjct: 1 MSIYVGNLSYQVEQEDLKQVFLEYGDVKSVQLPTDRETGRVRGFAFV 47
>gi|302543566|ref|ZP_07295908.1| RNA-binding protein [Streptomyces hygroscopicus ATCC 53653]
gi|302461184|gb|EFL24277.1| RNA-binding protein [Streptomyces himastatinicus ATCC 53653]
Length = 86
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 28/45 (62%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
L V NL+Y+TT DDL ++F G V D + DR T SRGF FV
Sbjct: 5 LHVGNLSYQTTKDDLEKLFAPFGAVMDATVITDRDTGRSRGFGFV 49
>gi|189465920|ref|ZP_03014705.1| hypothetical protein BACINT_02283 [Bacteroides intestinalis DSM
17393]
gi|189434184|gb|EDV03169.1| hypothetical protein BACINT_02283 [Bacteroides intestinalis DSM
17393]
Length = 128
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 29/48 (60%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
+++ V NL++ T D L+ +F + GEV YI DR T SRGF FV
Sbjct: 1 MNIYVANLSWNTNSDSLQELFSQYGEVTSAYIINDRETGRSRGFGFVE 48
>gi|74179690|dbj|BAE22485.1| unnamed protein product [Mus musculus]
Length = 262
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 35/59 (59%), Gaps = 5/59 (8%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
Y RPP SL V N+ T +DLRR F R G + D+Y+P D +TR RGFA+V+
Sbjct: 4 YLRPP-----NTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQ 57
>gi|162450147|ref|YP_001612514.1| RNA-binding protein [Sorangium cellulosum So ce56]
gi|161160729|emb|CAN92034.1| RNA-binding protein [Sorangium cellulosum So ce56]
Length = 95
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 28/45 (62%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
L V NL++ TT + L F GEV +I +P DR T + RGFAFV
Sbjct: 5 LYVGNLSFNTTRETLESAFAAAGEVREIAMPTDRETGQPRGFAFV 49
>gi|332807982|ref|XP_513202.3| PREDICTED: uncharacterized protein LOC456627 isoform 5 [Pan
troglodytes]
Length = 176
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 35/59 (59%), Gaps = 5/59 (8%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
Y RPP SL V N+ T +DLRR F R G + D+Y+P D +TR RGFA+V+
Sbjct: 4 YLRPP-----NTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQ 57
>gi|425459045|ref|ZP_18838531.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC
9808]
gi|389823285|emb|CCI28615.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC
9808]
Length = 97
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 31/48 (64%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
+S+ V NL+Y + DDL VF+ G V +YIP DR T RGFAFV+
Sbjct: 1 MSIFVGNLSYEISEDDLTDVFKDYGIVQRVYIPVDRDTGRKRGFAFVQ 48
>gi|187607268|ref|NP_001120028.1| heterogeneous nuclear ribonucleoprotein A3 [Xenopus (Silurana)
tropicalis]
gi|165971520|gb|AAI58334.1| LOC100144993 protein [Xenopus (Silurana) tropicalis]
gi|170284841|gb|AAI61197.1| LOC100144993 protein [Xenopus (Silurana) tropicalis]
Length = 383
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 32/57 (56%)
Query: 4 GRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
G P E + L + L++ TT D LR FE+ G++ D + RD T+ SRGF FV
Sbjct: 17 GHEPKEPEQLRKLFIGGLSFETTDDSLREHFEQWGKLTDCVVMRDPQTKRSRGFGFV 73
>gi|444723112|gb|ELW63776.1| Heterogeneous nuclear ribonucleoprotein A3 [Tupaia chinensis]
Length = 300
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 33/60 (55%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
++ G P E + L + L++ TT D LR FE+ G + D + RD T+ SRGF FV
Sbjct: 23 IAQGHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFV 82
>gi|390480607|ref|XP_003735962.1| PREDICTED: serine/arginine-rich splicing factor 10-like
[Callithrix jacchus]
Length = 123
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 35/59 (59%), Gaps = 5/59 (8%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
Y RPP SL V N+ T +DLRR F R G + D+Y+P D +TR RGFA+V+
Sbjct: 4 YLRPP-----NTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQ 57
>gi|358338503|dbj|GAA29066.2| translation initiation factor 3 subunit G [Clonorchis sinensis]
Length = 302
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 20/46 (43%), Positives = 32/46 (69%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+++V NL TT DDL+++F G V IY +D+ T+++RGFAF+
Sbjct: 226 TVRVTNLQPDTTADDLKQIFSPFGAVTRIYPAKDKVTQQNRGFAFI 271
>gi|285808363|gb|ADC35892.1| RNP-1 like RNA-binding protein [uncultured bacterium 246]
Length = 104
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 32/48 (66%)
Query: 13 MVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
M ++ V N++++TT +LR FE GE+ I I DR T ++RGFAFV
Sbjct: 1 MRNVFVGNMSFQTTEGELRAAFETYGEIARIQIMTDRDTGQARGFAFV 48
>gi|296207043|ref|XP_002750472.1| PREDICTED: serine/arginine-rich splicing factor 10 isoform 2
[Callithrix jacchus]
Length = 262
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 35/59 (59%), Gaps = 5/59 (8%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
Y RPP SL V N+ T +DLRR F R G + D+Y+P D +TR RGFA+V+
Sbjct: 4 YLRPP-----NTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQ 57
>gi|218245910|ref|YP_002371281.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 8801]
gi|257058958|ref|YP_003136846.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 8802]
gi|218166388|gb|ACK65125.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 8801]
gi|256589124|gb|ACV00011.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 8802]
Length = 98
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+S+ V NL Y T +DL +VF G V +++P DR T++ RGF FV
Sbjct: 1 MSIYVGNLAYEITEEDLTQVFAEYGTVKRVHLPVDRETQKMRGFGFV 47
>gi|153806393|ref|ZP_01959061.1| hypothetical protein BACCAC_00656 [Bacteroides caccae ATCC 43185]
gi|423218631|ref|ZP_17205127.1| hypothetical protein HMPREF1061_01900 [Bacteroides caccae
CL03T12C61]
gi|149131070|gb|EDM22276.1| hypothetical protein BACCAC_00656 [Bacteroides caccae ATCC 43185]
gi|392628134|gb|EIY22169.1| hypothetical protein HMPREF1061_01900 [Bacteroides caccae
CL03T12C61]
Length = 81
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 28/47 (59%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
++L + NL+Y DLR V E G V + + DR TR S+GFAFV
Sbjct: 1 MNLYIGNLSYNVKESDLRNVMEEYGTVASVKLITDRETRRSKGFAFV 47
>gi|145344842|ref|XP_001416933.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577159|gb|ABO95226.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 319
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 30/55 (54%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
P +L V N++ R LRR+FE CGEV + RD T +SRGF FV+
Sbjct: 13 PSSSRKHANLYVKNISERVDELTLRRLFEACGEVQSCCVIRDVSTNKSRGFGFVK 67
>gi|428214099|ref|YP_007087243.1| RRM domain-containing RNA-binding protein [Oscillatoria acuminata
PCC 6304]
gi|428002480|gb|AFY83323.1| RRM domain-containing RNA-binding protein [Oscillatoria acuminata
PCC 6304]
Length = 104
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 29/47 (61%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+S+ V NL+Y T +DL VF G V +++P DR T RGFAFV
Sbjct: 1 MSIYVGNLSYEVTQEDLTAVFAEYGSVQRVHLPTDRETGRPRGFAFV 47
>gi|448878334|gb|AGE46130.1| arginine/serine-rich splicing factor SCL28 transcript I [Sorghum
bicolor]
Length = 241
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%)
Query: 12 GMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
L + N++ P+D+R FE+ G + D+Y+PR+ TRE RGF FV+
Sbjct: 55 AQSGLLIRNISLTARPEDIRVPFEQFGPIKDVYLPRNFHTRELRGFGFVK 104
>gi|425459046|ref|ZP_18838532.1| putative RNA-binding protein rbpA [Microcystis aeruginosa PCC
9808]
gi|440754722|ref|ZP_20933924.1| RNA recognition motif family protein [Microcystis aeruginosa
TAIHU98]
gi|389823286|emb|CCI28617.1| putative RNA-binding protein rbpA [Microcystis aeruginosa PCC
9808]
gi|440174928|gb|ELP54297.1| RNA recognition motif family protein [Microcystis aeruginosa
TAIHU98]
Length = 97
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 32/47 (68%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+S+ V NL+Y + +DL VF+ G+V ++IP D+ T+ RGFAFV
Sbjct: 1 MSIFVGNLSYEISQEDLVEVFQDYGKVKRVHIPVDKETQRKRGFAFV 47
>gi|291566709|dbj|BAI88981.1| RNA-binding protein [Arthrospira platensis NIES-39]
Length = 93
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 27/47 (57%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+S+ V NL+Y TPDDL F G V IP DR T SRGF FV
Sbjct: 1 MSIYVGNLSYDVTPDDLSAAFAEYGTVKRSMIPTDRETGRSRGFGFV 47
>gi|302679630|ref|XP_003029497.1| hypothetical protein SCHCODRAFT_85789 [Schizophyllum commune
H4-8]
gi|300103187|gb|EFI94594.1| hypothetical protein SCHCODRAFT_85789 [Schizophyllum commune
H4-8]
Length = 174
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 27/43 (62%)
Query: 18 VDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
V NL++ TT D LR+ F G+V D + RDR T SRGF FV
Sbjct: 7 VGNLSWNTTDDTLRQAFSNFGQVLDSIVMRDRETGRSRGFGFV 49
>gi|293370299|ref|ZP_06616856.1| conserved hypothetical protein [Bacteroides ovatus SD CMC 3f]
gi|292634594|gb|EFF53126.1| conserved hypothetical protein [Bacteroides ovatus SD CMC 3f]
Length = 84
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 28/48 (58%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
++L + NL+Y DLR V E G V + + DR TR S+GFAF+
Sbjct: 4 MNLYIGNLSYNVKESDLRHVMEEYGTVASVKLITDRETRRSKGFAFIE 51
>gi|215734873|dbj|BAG95595.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 478
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 31/49 (63%)
Query: 12 GMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
VSL V NL P+D++ F++ G V D+Y+P+D T E RGFAFV
Sbjct: 33 AAVSLFVSNLPRSCRPEDVQVPFQKFGPVRDVYLPKDYNTGEPRGFAFV 81
>gi|431931272|ref|YP_007244318.1| RRM domain-containing RNA-binding protein [Thioflavicoccus
mobilis 8321]
gi|431829575|gb|AGA90688.1| RRM domain-containing RNA-binding protein [Thioflavicoccus
mobilis 8321]
Length = 94
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 29/47 (61%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+++ V NL Y T D+LR F GE+ + + D+FT +S+GF FV
Sbjct: 1 MNIYVGNLAYGVTEDELREAFGAFGEISSVSVITDKFTGQSKGFGFV 47
>gi|4001720|dbj|BAA35092.1| neural specific sr protein NSSR 1 [Mus musculus]
Length = 262
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 35/59 (59%), Gaps = 5/59 (8%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
Y RPP SL V N+ T +DLRR F R G + D+Y+P D +TR RGFA+V+
Sbjct: 4 YLRPP-----NTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQ 57
>gi|393783984|ref|ZP_10372153.1| hypothetical protein HMPREF1071_03021 [Bacteroides salyersiae
CL02T12C01]
gi|392667643|gb|EIY61150.1| hypothetical protein HMPREF1071_03021 [Bacteroides salyersiae
CL02T12C01]
Length = 81
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 31/47 (65%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+++ + NL+YR DLR+V E G V + + DR TR+S+GFAFV
Sbjct: 1 MNMYIGNLSYRVKEADLRQVMEEYGTVDSVKLIIDRDTRKSKGFAFV 47
>gi|224008472|ref|XP_002293195.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220971321|gb|EED89656.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 77
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 31/45 (68%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
L V NL++ TT + +R +FE+ G+V D ++P DR + RGFAFV
Sbjct: 1 LYVGNLSFETTEESVRGLFEQYGQVTDCFLPTDRDSGRVRGFAFV 45
>gi|186682695|ref|YP_001865891.1| RNP-1 like RNA-binding protein [Nostoc punctiforme PCC 73102]
gi|186465147|gb|ACC80948.1| RNP-1 like RNA-binding protein [Nostoc punctiforme PCC 73102]
Length = 104
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+S+ V NL+Y+ T +DL++ F G V + +P DR T RGFAFV
Sbjct: 1 MSIYVGNLSYQVTEEDLKQAFAEYGTVSRVQLPTDRETGRPRGFAFV 47
>gi|220909892|ref|YP_002485203.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7425]
gi|219866503|gb|ACL46842.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7425]
Length = 98
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 29/47 (61%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+S+ V NL+Y T +DL R F G V +++P DR T RGFAFV
Sbjct: 1 MSIYVGNLSYDVTQNDLVRAFGEYGNVKSVHLPTDRETGRVRGFAFV 47
>gi|126328572|ref|XP_001362618.1| PREDICTED: serine/arginine-rich splicing factor 10-like
[Monodelphis domestica]
Length = 262
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 35/59 (59%), Gaps = 5/59 (8%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
Y RPP SL V N+ T +DLRR F R G + D+Y+P D +TR RGFA+V+
Sbjct: 4 YLRPP-----NTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQ 57
>gi|410170856|ref|XP_003960061.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Homo
sapiens]
gi|426328339|ref|XP_004024960.1| PREDICTED: serine/arginine-rich splicing factor 10 [Gorilla
gorilla gorilla]
Length = 217
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 35/59 (59%), Gaps = 5/59 (8%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
Y RPP SL V N+ T +DLRR F R G + D+Y+P D +TR RGFA+V+
Sbjct: 4 YLRPP-----NTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQ 57
>gi|355557671|gb|EHH14451.1| hypothetical protein EGK_00378 [Macaca mulatta]
gi|355745027|gb|EHH49652.1| hypothetical protein EGM_00350 [Macaca fascicularis]
Length = 261
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 35/59 (59%), Gaps = 5/59 (8%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
Y RPP SL V N+ T +DLRR F R G + D+Y+P D +TR RGFA+V+
Sbjct: 4 YLRPP-----NTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQ 57
>gi|209878256|ref|XP_002140569.1| RNA recognition motif. family protein [Cryptosporidium muris
RN66]
gi|209556175|gb|EEA06220.1| RNA recognition motif. family protein [Cryptosporidium muris
RN66]
Length = 244
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 31/46 (67%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
SL + +L + T P +RRVFER G++ D+Y+P D T+ RGF FV
Sbjct: 14 SLLIRSLRFETPPSLVRRVFERFGQIRDVYLPVDFHTKRPRGFGFV 59
>gi|197097312|ref|NP_001125358.1| splicing factor, arginine/serine-rich 13A [Pongo abelii]
gi|55727814|emb|CAH90660.1| hypothetical protein [Pongo abelii]
Length = 262
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 35/59 (59%), Gaps = 5/59 (8%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
Y RPP SL V N+ T +DLRR F R G + D+Y+P D +TR RGFA+V+
Sbjct: 4 YLRPP-----NTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQ 57
>gi|410170863|ref|XP_003960064.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Homo
sapiens]
Length = 146
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 35/59 (59%), Gaps = 5/59 (8%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
Y RPP SL V N+ T +DLRR F R G + D+Y+P D +TR RGFA+V+
Sbjct: 4 YLRPP-----NTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQ 57
>gi|301754964|ref|XP_002913325.1| PREDICTED: splicing factor, arginine/serine-rich 13A-like
[Ailuropoda melanoleuca]
gi|359318923|ref|XP_003638943.1| PREDICTED: serine/arginine-rich splicing factor 10 [Canis lupus
familiaris]
Length = 183
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 35/59 (59%), Gaps = 5/59 (8%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
Y RPP SL V N+ T +DLRR F R G + D+Y+P D +TR RGFA+V+
Sbjct: 4 YLRPP-----NTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQ 57
>gi|428320405|ref|YP_007118287.1| RNP-1 like RNA-binding protein [Oscillatoria nigro-viridis PCC
7112]
gi|428244085|gb|AFZ09871.1| RNP-1 like RNA-binding protein [Oscillatoria nigro-viridis PCC
7112]
Length = 95
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+++ + NL+YR T +DL+ VF G V + +P DR T RGFAFV
Sbjct: 1 MTIYIGNLSYRATEEDLKAVFAEYGTVKRVVLPTDRETGRMRGFAFV 47
>gi|4001722|dbj|BAA35093.1| neural specific sr protein NSSR 2 [Mus musculus]
Length = 183
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 35/59 (59%), Gaps = 5/59 (8%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
Y RPP SL V N+ T +DLRR F R G + D+Y+P D +TR RGFA+V+
Sbjct: 4 YLRPP-----NTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQ 57
>gi|74204113|dbj|BAE29044.1| unnamed protein product [Mus musculus]
gi|74211878|dbj|BAE29284.1| unnamed protein product [Mus musculus]
Length = 183
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 35/59 (59%), Gaps = 5/59 (8%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
Y RPP SL V N+ T +DLRR F R G + D+Y+P D +TR RGFA+V+
Sbjct: 4 YLRPP-----NTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQ 57
>gi|348570784|ref|XP_003471177.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Cavia
porcellus]
Length = 173
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 35/59 (59%), Gaps = 5/59 (8%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
Y RPP SL V N+ T +DLRR F R G + D+Y+P D +TR RGFA+V+
Sbjct: 4 YLRPP-----NTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQ 57
>gi|359318927|ref|XP_003638945.1| PREDICTED: serine/arginine-rich splicing factor 10 [Canis lupus
familiaris]
Length = 262
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 35/59 (59%), Gaps = 5/59 (8%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
Y RPP SL V N+ T +DLRR F R G + D+Y+P D +TR RGFA+V+
Sbjct: 4 YLRPP-----NTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQ 57
>gi|160884538|ref|ZP_02065541.1| hypothetical protein BACOVA_02523 [Bacteroides ovatus ATCC 8483]
gi|237718602|ref|ZP_04549083.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|299145918|ref|ZP_07038986.1| RNA-binding protein [Bacteroides sp. 3_1_23]
gi|336413424|ref|ZP_08593776.1| hypothetical protein HMPREF1017_00884 [Bacteroides ovatus
3_8_47FAA]
gi|383111295|ref|ZP_09932108.1| hypothetical protein BSGG_4516 [Bacteroides sp. D2]
gi|423286638|ref|ZP_17265489.1| hypothetical protein HMPREF1069_00532 [Bacteroides ovatus
CL02T12C04]
gi|423296424|ref|ZP_17274509.1| hypothetical protein HMPREF1070_03174 [Bacteroides ovatus
CL03T12C18]
gi|156110277|gb|EDO12022.1| hypothetical protein BACOVA_02523 [Bacteroides ovatus ATCC 8483]
gi|229452062|gb|EEO57853.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|298516409|gb|EFI40290.1| RNA-binding protein [Bacteroides sp. 3_1_23]
gi|313696981|gb|EFS33816.1| hypothetical protein BSGG_4516 [Bacteroides sp. D2]
gi|335938468|gb|EGN00358.1| hypothetical protein HMPREF1017_00884 [Bacteroides ovatus
3_8_47FAA]
gi|392670147|gb|EIY63632.1| hypothetical protein HMPREF1070_03174 [Bacteroides ovatus
CL03T12C18]
gi|392675325|gb|EIY68767.1| hypothetical protein HMPREF1069_00532 [Bacteroides ovatus
CL02T12C04]
Length = 81
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
++L + NL+Y DLR V E G V + + DR TR S+GFAF+
Sbjct: 1 MNLYIGNLSYNVKESDLRHVMEEYGTVASVKLITDRETRRSKGFAFI 47
>gi|393788085|ref|ZP_10376216.1| hypothetical protein HMPREF1068_02496 [Bacteroides nordii
CL02T12C05]
gi|392656298|gb|EIY49937.1| hypothetical protein HMPREF1068_02496 [Bacteroides nordii
CL02T12C05]
Length = 81
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 31/47 (65%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+++ + NL+YR DLR+V E G V + + DR TR+S+GFAFV
Sbjct: 1 MNMYIGNLSYRVKEADLRQVMEEYGTVDSVKLIIDRDTRKSKGFAFV 47
>gi|119488026|ref|ZP_01621470.1| RNA-binding region protein [Lyngbya sp. PCC 8106]
gi|119455315|gb|EAW36454.1| RNA-binding region protein [Lyngbya sp. PCC 8106]
Length = 100
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 28/47 (59%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+S+ V NL Y T +DL+ VF G V + IP DR T RGFAFV
Sbjct: 1 MSIYVGNLAYEVTEEDLKSVFAEYGAVQRVSIPTDRETGRPRGFAFV 47
>gi|429329487|gb|AFZ81246.1| RNA recognition motif domain-containing protein [Babesia equi]
Length = 212
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 29/46 (63%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
SL + NL Y T+P ++ FER G + D+Y+P D TR RGF FV
Sbjct: 8 SLLIRNLRYSTSPQIVKETFERFGRIRDVYLPLDYNTRRPRGFGFV 53
>gi|427731667|ref|YP_007077904.1| RRM domain-containing RNA-binding protein [Nostoc sp. PCC 7524]
gi|427367586|gb|AFY50307.1| RRM domain-containing RNA-binding protein [Nostoc sp. PCC 7524]
Length = 103
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 28/47 (59%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+S+ V NL+Y T DDL +VF G V + +P DR T RGF FV
Sbjct: 1 MSIYVGNLSYSVTQDDLTKVFAEYGAVTRVQLPTDRETGRVRGFGFV 47
>gi|5730079|ref|NP_006616.1| serine/arginine-rich splicing factor 10 isoform 1 [Homo sapiens]
gi|6753820|ref|NP_034308.1| serine/arginine-rich splicing factor 10 isoform 1 [Mus musculus]
gi|346986279|ref|NP_001231297.1| serine/arginine-rich splicing factor 10 isoform 2 [Sus scrofa]
gi|114554649|ref|XP_001166460.1| PREDICTED: uncharacterized protein LOC456627 isoform 3 [Pan
troglodytes]
gi|332266729|ref|XP_003282350.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Nomascus
leucogenys]
gi|344287394|ref|XP_003415438.1| PREDICTED: serine/arginine-rich splicing factor 10-like isoform 4
[Loxodonta africana]
gi|403287342|ref|XP_003934908.1| PREDICTED: serine/arginine-rich splicing factor 10 [Saimiri
boliviensis boliviensis]
gi|410032453|ref|XP_003949372.1| PREDICTED: uncharacterized protein LOC456627 [Pan troglodytes]
gi|426328337|ref|XP_004024959.1| PREDICTED: serine/arginine-rich splicing factor 10 [Gorilla
gorilla gorilla]
gi|441676940|ref|XP_004092716.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Nomascus
leucogenys]
gi|16265857|gb|AAL16665.1|AF419331_1 TLS-associated protein TASR-1 [Homo sapiens]
gi|2961107|gb|AAC70916.1| TLS-associated protein with SR repeats [Mus musculus]
gi|2961149|gb|AAC70918.1| TLS-associated protein TASR [Homo sapiens]
gi|7022446|dbj|BAA91601.1| unnamed protein product [Homo sapiens]
gi|12654547|gb|AAH01107.1| FUS interacting protein (serine/arginine-rich) 1 [Homo sapiens]
gi|15787482|gb|AAL06098.1| TLS-associated SR protein 1 [Homo sapiens]
gi|25006524|gb|AAN65381.1| splicing factor SRp38-2 [Homo sapiens]
gi|74178032|dbj|BAE29809.1| unnamed protein product [Mus musculus]
gi|74195900|dbj|BAE30509.1| unnamed protein product [Mus musculus]
gi|74214411|dbj|BAE40441.1| unnamed protein product [Mus musculus]
gi|261861046|dbj|BAI47045.1| splicing factor, arginine/serine-rich 13A [synthetic construct]
gi|312153330|gb|ADQ33177.1| FUS interacting protein (serine/arginine-rich) 1 [synthetic
construct]
gi|410223008|gb|JAA08723.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410261894|gb|JAA18913.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410302462|gb|JAA29831.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410330571|gb|JAA34232.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|417396659|gb|JAA45363.1| Putative serine/arginine-rich splicing factor [Desmodus rotundus]
Length = 183
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 35/59 (59%), Gaps = 5/59 (8%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
Y RPP SL V N+ T +DLRR F R G + D+Y+P D +TR RGFA+V+
Sbjct: 4 YLRPP-----NTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQ 57
>gi|332710459|ref|ZP_08430406.1| RRM domain RNA-binding protein [Moorea producens 3L]
gi|332350790|gb|EGJ30383.1| RRM domain RNA-binding protein [Moorea producens 3L]
Length = 93
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 31/47 (65%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+++ V NL+Y+ T DDL+ VF G V + +P DR T + RGFAFV
Sbjct: 1 MTIYVGNLSYQATEDDLKTVFGDYGTVKRVVMPTDRETGKMRGFAFV 47
>gi|409991967|ref|ZP_11275186.1| RNA-binding region RNP-1 [Arthrospira platensis str. Paraca]
gi|409937161|gb|EKN78606.1| RNA-binding region RNP-1 [Arthrospira platensis str. Paraca]
Length = 93
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 27/47 (57%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+S+ V NL+Y TPDDL F G V IP DR T SRGF FV
Sbjct: 1 MSIYVGNLSYDVTPDDLSAAFAEYGTVKRSMIPTDRETGRSRGFGFV 47
>gi|62897549|dbj|BAD96714.1| FUS interacting protein (serine-arginine rich) 1 isoform 2
variant [Homo sapiens]
Length = 262
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 35/59 (59%), Gaps = 5/59 (8%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
Y RPP SL V N+ T +DLRR F R G + D+Y+P D +TR RGFA+V+
Sbjct: 4 YLRPP-----NTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQ 57
>gi|294933970|ref|XP_002780926.1| serine/arginine rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
gi|239891073|gb|EER12721.1| serine/arginine rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
Length = 235
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 29/46 (63%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
SL V NL Y T+P +R +F R GE+ D+Y+P D + RGF FV
Sbjct: 69 SLIVRNLNYDTSPQHVRSLFSRYGEIRDVYLPLDYNSGRPRGFGFV 114
>gi|16905517|ref|NP_473357.1| serine/arginine-rich splicing factor 10 isoform 2 [Homo sapiens]
gi|122937372|ref|NP_001073856.1| serine/arginine-rich splicing factor 10 isoform 2 [Mus musculus]
gi|332807987|ref|XP_003307925.1| PREDICTED: uncharacterized protein LOC456627 [Pan troglodytes]
gi|344287388|ref|XP_003415435.1| PREDICTED: serine/arginine-rich splicing factor 10-like isoform 1
[Loxodonta africana]
gi|397140010|ref|XP_003846472.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Homo
sapiens]
gi|397478979|ref|XP_003810811.1| PREDICTED: serine/arginine-rich splicing factor 10 [Pan paniscus]
gi|403287348|ref|XP_003934911.1| PREDICTED: serine/arginine-rich splicing factor 10 [Saimiri
boliviensis boliviensis]
gi|403287350|ref|XP_003934912.1| PREDICTED: serine/arginine-rich splicing factor 10 [Saimiri
boliviensis boliviensis]
gi|441676930|ref|XP_004092715.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Nomascus
leucogenys]
gi|47605579|sp|O75494.1|SRS10_HUMAN RecName: Full=Serine/arginine-rich splicing factor 10; AltName:
Full=40 kDa SR-repressor protein; Short=SRrp40;
AltName: Full=FUS-interacting serine-arginine-rich
protein 1; AltName: Full=Splicing factor SRp38;
AltName: Full=Splicing factor, arginine/serine-rich
13A; AltName: Full=TLS-associated protein with Ser-Arg
repeats; Short=TASR; Short=TLS-associated protein with
SR repeats; AltName: Full=TLS-associated
serine-arginine protein; Short=TLS-associated SR
protein
gi|47605750|sp|Q9R0U0.2|SRS10_MOUSE RecName: Full=Serine/arginine-rich splicing factor 10; AltName:
Full=FUS-interacting serine-arginine-rich protein 1;
AltName: Full=Neural-salient serine/arginine-rich
protein; AltName: Full=Neural-specific SR protein;
AltName: Full=Splicing factor, arginine/serine-rich
13A; AltName: Full=TLS-associated protein with Ser-Arg
repeats; Short=TASR; Short=TLS-associated protein with
SR repeats; AltName: Full=TLS-associated
serine-arginine protein; Short=TLS-associated SR
protein
gi|18034489|gb|AAL57514.1|AF449427_1 SRrp40 [Homo sapiens]
gi|3327957|gb|AAC26715.1| TLS-associated protein TASR-2 [Mus musculus]
gi|3327976|gb|AAC26727.1| TLS-associated protein TASR-2 [Homo sapiens]
gi|12852132|dbj|BAB29286.1| unnamed protein product [Mus musculus]
gi|13477159|gb|AAH05039.1| FUS interacting protein (serine/arginine-rich) 1 [Homo sapiens]
gi|15787483|gb|AAL06099.1| TLS-associated SR protein 2 [Homo sapiens]
gi|25006522|gb|AAN65380.1| splicing factor SRp38 [Homo sapiens]
gi|29144881|gb|AAH43060.1| FUS interacting protein (serine-arginine rich) 1 [Mus musculus]
gi|52789308|gb|AAH83082.1| FUS interacting protein (serine-arginine rich) 1 [Mus musculus]
gi|74214326|dbj|BAE40403.1| unnamed protein product [Mus musculus]
gi|74214388|dbj|BAE40431.1| unnamed protein product [Mus musculus]
gi|410223010|gb|JAA08724.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410261892|gb|JAA18912.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410261896|gb|JAA18914.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410261898|gb|JAA18915.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410302464|gb|JAA29832.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410302466|gb|JAA29833.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410302468|gb|JAA29834.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410330569|gb|JAA34231.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410330573|gb|JAA34233.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|417398022|gb|JAA46044.1| Putative serine/arginine-rich splicing factor 10 [Desmodus
rotundus]
Length = 262
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 35/59 (59%), Gaps = 5/59 (8%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
Y RPP SL V N+ T +DLRR F R G + D+Y+P D +TR RGFA+V+
Sbjct: 4 YLRPP-----NTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQ 57
>gi|346986281|ref|NP_001231298.1| serine/arginine-rich splicing factor 10 isoform 1 [Sus scrofa]
gi|338784425|gb|AEI98875.1| serine/arginine-rich splicing factor 10 isoform 2 [Sus scrofa]
Length = 262
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 35/59 (59%), Gaps = 5/59 (8%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
Y RPP SL V N+ T +DLRR F R G + D+Y+P D +TR RGFA+V+
Sbjct: 4 YLRPP-----NTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQ 57
>gi|300360547|ref|NP_001177934.1| serine/arginine-rich splicing factor 10 isoform 3 [Homo sapiens]
gi|307133714|ref|NP_001182513.1| splicing factor, arginine/serine-rich 13A [Macaca mulatta]
gi|16265859|gb|AAL16666.1|AF419332_1 TLS-associated protein TASR-2 [Homo sapiens]
gi|193786066|dbj|BAG50956.1| unnamed protein product [Homo sapiens]
Length = 261
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 35/59 (59%), Gaps = 5/59 (8%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
Y RPP SL V N+ T +DLRR F R G + D+Y+P D +TR RGFA+V+
Sbjct: 4 YLRPP-----NTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQ 57
>gi|118151320|ref|NP_001071594.1| splicing factor, arginine/serine-rich 13A [Bos taurus]
gi|73586753|gb|AAI03101.1| FUS interacting protein (serine/arginine-rich) 1 [Bos taurus]
gi|296490040|tpg|DAA32153.1| TPA: FUS interacting protein (serine/arginine-rich) 1 [Bos
taurus]
Length = 182
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 35/59 (59%), Gaps = 5/59 (8%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
Y RPP SL V N+ T +DLRR F R G + D+Y+P D +TR RGFA+V+
Sbjct: 4 YLRPP-----NTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQ 57
>gi|359318925|ref|XP_003638944.1| PREDICTED: serine/arginine-rich splicing factor 10 [Canis lupus
familiaris]
Length = 173
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 35/59 (59%), Gaps = 5/59 (8%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
Y RPP SL V N+ T +DLRR F R G + D+Y+P D +TR RGFA+V+
Sbjct: 4 YLRPP-----NTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQ 57
>gi|71897267|ref|NP_001026077.1| splicing factor, arginine/serine-rich 13A [Gallus gallus]
gi|53126728|emb|CAG30979.1| hypothetical protein RCJMB04_1g4 [Gallus gallus]
Length = 262
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 35/59 (59%), Gaps = 5/59 (8%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
Y RPP SL V N+ T +DLRR F R G + D+Y+P D +TR RGFA+V+
Sbjct: 4 YLRPP-----NTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQ 57
>gi|300360549|ref|NP_001177936.1| serine/arginine-rich splicing factor 10 isoform 5 [Homo sapiens]
gi|291393216|ref|XP_002713069.1| PREDICTED: FUS interacting protein (serine-arginine rich) 1
[Oryctolagus cuniculus]
gi|410170859|ref|XP_003960062.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Homo
sapiens]
gi|74139434|dbj|BAE40858.1| unnamed protein product [Mus musculus]
Length = 182
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 35/59 (59%), Gaps = 5/59 (8%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
Y RPP SL V N+ T +DLRR F R G + D+Y+P D +TR RGFA+V+
Sbjct: 4 YLRPP-----NTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQ 57
>gi|403287344|ref|XP_003934909.1| PREDICTED: serine/arginine-rich splicing factor 10 [Saimiri
boliviensis boliviensis]
Length = 173
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 35/59 (59%), Gaps = 5/59 (8%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
Y RPP SL V N+ T +DLRR F R G + D+Y+P D +TR RGFA+V+
Sbjct: 4 YLRPP-----NTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQ 57
>gi|325459322|gb|ADZ13678.1| subunit delta of eukaryotic translation initiation factor 3
[Clonorchis sinensis]
Length = 283
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 20/46 (43%), Positives = 32/46 (69%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+++V NL TT DDL+++F G V IY +D+ T+++RGFAF+
Sbjct: 203 TVRVTNLQPDTTADDLKQIFSPFGAVTRIYPAKDKVTQQNRGFAFI 248
>gi|145346140|ref|XP_001417551.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577778|gb|ABO95844.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 92
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 31/48 (64%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
VS+ V N+++ DD+R F+ G V D+Y+P+DR T RG AFV+
Sbjct: 1 VSVLVRNISFDAHEDDIRDKFQAYGNVLDVYMPKDRETGRKRGLAFVK 48
>gi|344287390|ref|XP_003415436.1| PREDICTED: serine/arginine-rich splicing factor 10-like isoform 2
[Loxodonta africana]
Length = 173
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 35/59 (59%), Gaps = 5/59 (8%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
Y RPP SL V N+ T +DLRR F R G + D+Y+P D +TR RGFA+V+
Sbjct: 4 YLRPP-----NTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQ 57
>gi|296216773|ref|XP_002754712.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein
A1-like 3-like isoform 1 [Callithrix jacchus]
Length = 320
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 33/61 (54%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MS P E + L + L++ TT + LR FE+ G + D + RD T+ SRGF FV
Sbjct: 1 MSKSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFV 60
Query: 61 R 61
R
Sbjct: 61 R 61
>gi|237708674|ref|ZP_04539155.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|229457374|gb|EEO63095.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
Length = 64
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 29/48 (60%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
+++ V NL+Y DLR V E G VG + + DR TR S+GFAFV
Sbjct: 1 MNMYVGNLSYNVKEVDLREVMEEYGTVGSVKLIVDRDTRRSKGFAFVE 48
>gi|428308134|ref|YP_007144959.1| RNP-1 like RNA-binding protein [Crinalium epipsammum PCC 9333]
gi|428249669|gb|AFZ15449.1| RNP-1 like RNA-binding protein [Crinalium epipsammum PCC 9333]
Length = 113
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 28/47 (59%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+S+ V NL+Y T DDL VF G V + +P DR T RGFAFV
Sbjct: 1 MSIYVGNLSYEVTEDDLNSVFAEYGTVKRVNLPNDRETGRPRGFAFV 47
>gi|198450175|ref|XP_002137048.1| GA26796 [Drosophila pseudoobscura pseudoobscura]
gi|198130926|gb|EDY67606.1| GA26796 [Drosophila pseudoobscura pseudoobscura]
Length = 368
Score = 44.7 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 11 EGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
E M L + L YRTT D+L+ FE+ G++ D+ + +D T+ SRGF F+
Sbjct: 23 EHMRKLFIGGLDYRTTDDNLKAHFEKWGQIVDVVVMKDPRTKRSRGFGFI 72
>gi|126658060|ref|ZP_01729212.1| RNA-binding region RNP-1 [Cyanothece sp. CCY0110]
gi|126620698|gb|EAZ91415.1| RNA-binding region RNP-1 [Cyanothece sp. CCY0110]
Length = 94
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 29/47 (61%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+S+ V NL+Y T DL +VF G V + IP DR T +SRGF FV
Sbjct: 1 MSIYVGNLSYDVTQVDLEQVFAEYGTVKRVQIPSDRETGKSRGFGFV 47
>gi|90079587|dbj|BAE89473.1| unnamed protein product [Macaca fascicularis]
Length = 219
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 35/59 (59%), Gaps = 5/59 (8%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
Y RPP SL V N+ T +DLRR F R G + D+Y+P D +TR RGFA+V+
Sbjct: 4 YLRPP-----NTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQ 57
>gi|195391065|ref|XP_002054186.1| GJ22934 [Drosophila virilis]
gi|194152272|gb|EDW67706.1| GJ22934 [Drosophila virilis]
Length = 355
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 11 EGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
E M L + L YRTT D+L+ FE+ G++ D+ + +D T+ SRGF F+
Sbjct: 24 EHMRKLFIGGLDYRTTDDNLKAHFEKWGQIVDVVVMKDPRTKRSRGFGFI 73
>gi|195113003|ref|XP_002001061.1| GI10577 [Drosophila mojavensis]
gi|193917655|gb|EDW16522.1| GI10577 [Drosophila mojavensis]
Length = 359
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 11 EGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
E M L + L YRTT D+L+ FE+ G++ D+ + +D T+ SRGF F+
Sbjct: 24 EHMRKLFIGGLDYRTTDDNLKAHFEKWGQIVDVVVMKDPRTKRSRGFGFI 73
>gi|300360545|ref|NP_001177935.1| serine/arginine-rich splicing factor 10 isoform 4 [Homo sapiens]
gi|332266731|ref|XP_003282351.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Nomascus
leucogenys]
gi|397140012|ref|XP_003846473.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Homo
sapiens]
gi|426328341|ref|XP_004024961.1| PREDICTED: serine/arginine-rich splicing factor 10 [Gorilla
gorilla gorilla]
gi|14603220|gb|AAH10074.1| FUSIP1 protein [Homo sapiens]
Length = 173
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 35/59 (59%), Gaps = 5/59 (8%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
Y RPP SL V N+ T +DLRR F R G + D+Y+P D +TR RGFA+V+
Sbjct: 4 YLRPP-----NTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQ 57
>gi|26342521|dbj|BAC25110.1| unnamed protein product [Mus musculus]
Length = 69
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 35/59 (59%), Gaps = 5/59 (8%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
Y RPP SL V N+ T +DLRR F R G + D+Y+P D +TR RGFA+V+
Sbjct: 4 YLRPP-----NTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQ 57
>gi|327285770|ref|XP_003227605.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 10-like [Anolis carolinensis]
Length = 262
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 35/59 (59%), Gaps = 5/59 (8%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
Y RPP SL V N+ T +DLRR F R G + D+Y+P D +TR RGFA+V+
Sbjct: 4 YLRPP-----NTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQ 57
>gi|427723348|ref|YP_007070625.1| RNP-1 like RNA-binding protein [Leptolyngbya sp. PCC 7376]
gi|427355068|gb|AFY37791.1| RNP-1 like RNA-binding protein [Leptolyngbya sp. PCC 7376]
Length = 83
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 27/47 (57%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+S+ V NL Y DDL+ VF G V +Y+P DR T RGF FV
Sbjct: 1 MSIYVGNLDYAVEEDDLKEVFADYGTVKRVYLPMDRETNRKRGFGFV 47
>gi|393784463|ref|ZP_10372626.1| hypothetical protein HMPREF1071_03494 [Bacteroides salyersiae
CL02T12C01]
gi|392665444|gb|EIY58968.1| hypothetical protein HMPREF1071_03494 [Bacteroides salyersiae
CL02T12C01]
Length = 81
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+++ V NL+Y DLR+V E G V + I DR TR S+GFAF+
Sbjct: 1 MNMYVGNLSYNVKESDLRQVMEEYGTVESVKIITDRETRRSKGFAFI 47
>gi|290996979|ref|XP_002681059.1| RRM domain-containing protein [Naegleria gruberi]
gi|284094682|gb|EFC48315.1| RRM domain-containing protein [Naegleria gruberi]
Length = 285
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 29/44 (65%)
Query: 18 VDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
V NL D+R +FE CGE+ ++ +P+D+ T + +GFAFV+
Sbjct: 140 VGNLPESAEEQDIRELFETCGEIEEVRMPKDKDTEKKKGFAFVQ 183
>gi|47939492|gb|AAH71575.1| FUSIP1 protein [Homo sapiens]
Length = 69
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 35/59 (59%), Gaps = 5/59 (8%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
Y RPP SL V N+ T +DLRR F R G + D+Y+P D +TR RGFA+V+
Sbjct: 4 YLRPP-----NTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQ 57
>gi|71043780|ref|NP_001020909.1| serine/arginine-rich splicing factor 10 [Rattus norvegicus]
gi|68533686|gb|AAH98831.1| FUS interacting protein (serine-arginine rich) 1 [Rattus
norvegicus]
Length = 164
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 35/59 (59%), Gaps = 5/59 (8%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
Y RPP SL V N+ T +DLRR F R G + D+Y+P D +TR RGFA+V+
Sbjct: 4 YLRPP-----NTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQ 57
>gi|390337101|ref|XP_800412.2| PREDICTED: serine/arginine-rich splicing factor 12-like
[Strongylocentrotus purpuratus]
Length = 205
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 36/60 (60%), Gaps = 5/60 (8%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTT-PDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
YG PP SL V NL + +D+R +F + G + DIYIP D +TRE RGFA+V+
Sbjct: 5 YGSRPPN----TSLYVRNLPDDVSRAEDMRNLFGKYGPISDIYIPLDYYTREPRGFAYVQ 60
>gi|209527711|ref|ZP_03276207.1| RNP-1 like RNA-binding protein [Arthrospira maxima CS-328]
gi|376007663|ref|ZP_09784855.1| Glycine-rich RNA-binding protein, rbp-like [Arthrospira sp. PCC
8005]
gi|209491832|gb|EDZ92191.1| RNP-1 like RNA-binding protein [Arthrospira maxima CS-328]
gi|375323983|emb|CCE20608.1| Glycine-rich RNA-binding protein, rbp-like [Arthrospira sp. PCC
8005]
Length = 95
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 31/47 (65%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+S+ V NL+Y T +DL+ VF G V +++P DR T + RGFAFV
Sbjct: 1 MSIYVGNLSYDVTDEDLKEVFAEYGTVKRVHLPTDRETGKFRGFAFV 47
>gi|148230657|ref|NP_001081318.1| heterogeneous nuclear ribonucleoprotein A3 homolog 1 [Xenopus
laevis]
gi|1710625|sp|P51968.1|RO31_XENLA RecName: Full=Heterogeneous nuclear ribonucleoprotein A3 homolog
1; AltName: Full=hnRNP A3(A)
gi|214745|gb|AAA49949.1| ribonucleoprotein [Xenopus laevis]
Length = 373
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 32/57 (56%)
Query: 4 GRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
G P E + L + L++ TT D LR FE+ G++ D + RD T+ SRGF FV
Sbjct: 17 GHDPKEPEQLRKLFIGGLSFETTDDSLREHFEQWGKLTDCVVMRDPQTKRSRGFGFV 73
>gi|294647277|ref|ZP_06724872.1| RNA-binding protein [Bacteroides ovatus SD CC 2a]
gi|294808522|ref|ZP_06767270.1| RNA-binding protein [Bacteroides xylanisolvens SD CC 1b]
gi|292637353|gb|EFF55776.1| RNA-binding protein [Bacteroides ovatus SD CC 2a]
gi|294444255|gb|EFG12974.1| RNA-binding protein [Bacteroides xylanisolvens SD CC 1b]
Length = 84
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
++L + NL+Y DLR V E G V + + DR TR S+GFAF+
Sbjct: 4 MNLYIGNLSYNVKESDLRNVMEEYGTVASVKLITDRETRRSKGFAFI 50
>gi|296476640|tpg|DAA18755.1| TPA: FUS interacting protein (serine-arginine rich) 1-like [Bos
taurus]
Length = 262
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 35/59 (59%), Gaps = 5/59 (8%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
Y RPP SL V N+ T +DLRR F R G + D+Y+P D +TR RGFA+V+
Sbjct: 4 YLRPP-----NTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQ 57
>gi|294775690|ref|ZP_06741196.1| conserved hypothetical protein [Bacteroides vulgatus PC510]
gi|294450473|gb|EFG18967.1| conserved hypothetical protein [Bacteroides vulgatus PC510]
Length = 84
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 30/48 (62%)
Query: 13 MVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
++++ V NL+Y DLR V E G VG + + DR TR S+GFAFV
Sbjct: 3 VMNMYVGNLSYNVKEVDLREVMEEYGTVGSVKLIIDRDTRRSKGFAFV 50
>gi|262406570|ref|ZP_06083119.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|345509344|ref|ZP_08788944.1| hypothetical protein BSAG_04263 [Bacteroides sp. D1]
gi|423213688|ref|ZP_17200217.1| hypothetical protein HMPREF1074_01749 [Bacteroides xylanisolvens
CL03T12C04]
gi|229446758|gb|EEO52549.1| hypothetical protein BSAG_04263 [Bacteroides sp. D1]
gi|262355273|gb|EEZ04364.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|392693617|gb|EIY86848.1| hypothetical protein HMPREF1074_01749 [Bacteroides xylanisolvens
CL03T12C04]
Length = 81
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
++L + NL+Y DLR V E G V + + DR TR S+GFAF+
Sbjct: 1 MNLYIGNLSYNVKESDLRNVMEEYGTVASVKLITDRETRRSKGFAFI 47
>gi|218262316|ref|ZP_03476830.1| hypothetical protein PRABACTJOHN_02504 [Parabacteroides johnsonii
DSM 18315]
gi|423343074|ref|ZP_17320788.1| hypothetical protein HMPREF1077_02218 [Parabacteroides johnsonii
CL02T12C29]
gi|218223467|gb|EEC96117.1| hypothetical protein PRABACTJOHN_02504 [Parabacteroides johnsonii
DSM 18315]
gi|409216750|gb|EKN09733.1| hypothetical protein HMPREF1077_02218 [Parabacteroides johnsonii
CL02T12C29]
Length = 80
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+++ V NL YR DDL++V E G V + I +DR T +S+GF FV
Sbjct: 1 MNIYVGNLNYRVREDDLKQVMEEYGTVESVKIIKDRETGKSKGFGFV 47
>gi|353239109|emb|CCA71033.1| related to TIF35-translation initiation factor eIF3 subunit
[Piriformospora indica DSM 11827]
Length = 275
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 22/46 (47%), Positives = 31/46 (67%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+L+V N++ T DDLR +F R G V +YI RDR T + +G+AFV
Sbjct: 190 TLRVTNVSEDATDDDLRDLFSRFGRVHRVYIGRDRETGQGKGYAFV 235
>gi|238493741|ref|XP_002378107.1| small subunit of nuclear cap-binding protein complex [Aspergillus
flavus NRRL3357]
gi|317157348|ref|XP_003190832.1| nuclear cap-binding protein subunit 2 [Aspergillus oryzae RIB40]
gi|220696601|gb|EED52943.1| small subunit of nuclear cap-binding protein complex [Aspergillus
flavus NRRL3357]
Length = 177
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 32/55 (58%)
Query: 6 PPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
P ++ +L V NL++ TT + + +F +CGEV + + DRFT+ GF FV
Sbjct: 40 PTDNLKNATTLYVGNLSFYTTEEQIHELFSKCGEVKRLVMGLDRFTKTPCGFCFV 94
>gi|212691728|ref|ZP_03299856.1| hypothetical protein BACDOR_01223 [Bacteroides dorei DSM 17855]
gi|423242403|ref|ZP_17223511.1| hypothetical protein HMPREF1065_04134 [Bacteroides dorei
CL03T12C01]
gi|212665629|gb|EEB26201.1| hypothetical protein BACDOR_01223 [Bacteroides dorei DSM 17855]
gi|392639196|gb|EIY33022.1| hypothetical protein HMPREF1065_04134 [Bacteroides dorei
CL03T12C01]
Length = 81
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 29/47 (61%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+++ V NL+Y DLR V E G VG + + DR TR S+GFAFV
Sbjct: 1 MNMYVGNLSYNVKEVDLREVMEEYGTVGSVKLIVDRDTRRSKGFAFV 47
>gi|387018108|gb|AFJ51172.1| Heterogeneous nuclear ribonucleoprotein A3-like [Crotalus
adamanteus]
Length = 225
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 31/57 (54%)
Query: 4 GRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
G P E + L + L++ TT D LR FE+ G + D + RD T+ SRGF FV
Sbjct: 3 GHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGALTDCVVMRDPQTKRSRGFGFV 59
>gi|119492303|ref|ZP_01623650.1| RNA-binding region protein [Lyngbya sp. PCC 8106]
gi|119453188|gb|EAW34355.1| RNA-binding region protein [Lyngbya sp. PCC 8106]
Length = 101
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 29/47 (61%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+S+ V NL+Y T +DL+ VF G V + IP DR T RGFAFV
Sbjct: 1 MSIYVGNLSYEVTEEDLKSVFAEYGTVQRVSIPTDRETGRPRGFAFV 47
>gi|224373359|ref|YP_002607731.1| RNA-binding protein [Nautilia profundicola AmH]
gi|223589280|gb|ACM93016.1| RNA-binding protein [Nautilia profundicola AmH]
Length = 84
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 29/48 (60%)
Query: 13 MVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
M ++ V N+ Y+ T DDLR VF GEV + I DR T S+GF FV
Sbjct: 1 MKTIYVGNINYQATEDDLRPVFAEYGEVISVKIINDRETGRSKGFGFV 48
>gi|443647612|ref|ZP_21129748.1| RNA recognition motiffamily protein [Microcystis aeruginosa
DIANCHI905]
gi|159026368|emb|CAO88919.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|443335466|gb|ELS49937.1| RNA recognition motiffamily protein [Microcystis aeruginosa
DIANCHI905]
Length = 97
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 32/47 (68%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+S+ V NL+Y + +DL VF+ G+V ++IP D+ T+ RGFAFV
Sbjct: 1 MSIFVGNLSYEISQEDLVEVFQDYGKVKRVHIPVDKDTQRKRGFAFV 47
>gi|449017398|dbj|BAM80800.1| similar to SR family splicing factor SC35 [Cyanidioschyzon merolae
strain 10D]
Length = 194
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 24/52 (46%), Positives = 32/52 (61%)
Query: 10 IEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
++ V L V N+ + T +DL +F G+V DI+IP DR R RGFAFVR
Sbjct: 65 LQNSVGLMVRNIPFGTRQEDLLELFRPYGDVIDIFIPWDRQLRRIRGFAFVR 116
>gi|291404036|ref|XP_002718366.1| PREDICTED: FUS interacting protein (serine-arginine rich) 1
[Oryctolagus cuniculus]
Length = 182
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 35/59 (59%), Gaps = 5/59 (8%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
Y RPP SL V N+ T +DLRR F R G + D+Y+P D +TR RGFA+V+
Sbjct: 4 YLRPP-----NTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPIDFYTRRPRGFAYVQ 57
>gi|222616447|gb|EEE52579.1| hypothetical protein OsJ_34868 [Oryza sativa Japonica Group]
Length = 864
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 31/47 (65%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
VSL V NL P+D++ F++ G V D+Y+P+D T E RGFAFV
Sbjct: 397 VSLFVSNLPRSCRPEDVQVPFQKFGPVRDVYLPKDYNTGEPRGFAFV 443
>gi|443654715|ref|ZP_21131411.1| RNA recognition motiffamily protein [Microcystis aeruginosa
DIANCHI905]
gi|159026915|emb|CAO89166.1| rbpF/A2 [Microcystis aeruginosa PCC 7806]
gi|443333703|gb|ELS48246.1| RNA recognition motiffamily protein [Microcystis aeruginosa
DIANCHI905]
Length = 100
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+++ V NL Y T +DL+ VF G V +Y+P DR T + RGF FV
Sbjct: 1 MTIYVGNLVYEVTTNDLQEVFAEYGTVSRVYLPVDRETGKMRGFGFV 47
>gi|425448845|ref|ZP_18828689.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC
7941]
gi|389767706|emb|CCI06978.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC
7941]
Length = 97
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 31/47 (65%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+S+ V NL+Y + +DL VF+ GEV ++IP D+ T RGFAFV
Sbjct: 1 MSIFVGNLSYEISQEDLVEVFKDYGEVQRVHIPVDKETGRKRGFAFV 47
>gi|299751777|ref|XP_001830476.2| glycine-rich RNA binding protein [Coprinopsis cinerea
okayama7#130]
gi|298409530|gb|EAU91356.2| glycine-rich RNA binding protein [Coprinopsis cinerea
okayama7#130]
Length = 142
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 27/43 (62%)
Query: 18 VDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
V NL++ TT D LR+ F + G V D + RDR T SRGF FV
Sbjct: 7 VGNLSWNTTDDSLRQAFSQYGNVLDSIVMRDRDTGRSRGFGFV 49
>gi|162454265|ref|YP_001616632.1| RNA-binding protein [Sorangium cellulosum So ce56]
gi|161164847|emb|CAN96152.1| RNA-binding protein [Sorangium cellulosum So ce56]
Length = 138
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 28/45 (62%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
L V NL++ TT + L F GEV +I +P DR T + RGFAFV
Sbjct: 5 LYVGNLSFSTTRETLESAFAAAGEVREIAMPTDRETGQPRGFAFV 49
>gi|67539694|ref|XP_663621.1| hypothetical protein AN6017.2 [Aspergillus nidulans FGSC A4]
gi|40738468|gb|EAA57658.1| hypothetical protein AN6017.2 [Aspergillus nidulans FGSC A4]
Length = 785
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 33/50 (66%)
Query: 11 EGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+ + +L+V N++ +LR +FER G V +++ RDR T+ ++GFAF+
Sbjct: 702 DDLATLRVTNVSELAEEQELRDLFERFGRVTRVFLARDRETQRAKGFAFI 751
>gi|220906769|ref|YP_002482080.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7425]
gi|219863380|gb|ACL43719.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7425]
Length = 104
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 29/47 (61%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+S+ + NL+Y T +DL +F G V I++P DR T + RGF FV
Sbjct: 1 MSIYIGNLSYNATQEDLTAIFAEYGTVKQIHLPVDRETGKKRGFGFV 47
>gi|288942469|ref|YP_003444709.1| RNP-1 like RNA-binding protein [Allochromatium vinosum DSM 180]
gi|288897841|gb|ADC63677.1| RNP-1 like RNA-binding protein [Allochromatium vinosum DSM 180]
Length = 94
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 28/47 (59%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+++ V NL Y T DDLR F G V + D+FT +S+GFAFV
Sbjct: 1 MNIYVGNLAYSVTQDDLREAFGAYGNVESANLITDKFTGDSKGFAFV 47
>gi|154494359|ref|ZP_02033679.1| hypothetical protein PARMER_03714 [Parabacteroides merdae ATCC
43184]
gi|423346931|ref|ZP_17324618.1| hypothetical protein HMPREF1060_02290 [Parabacteroides merdae
CL03T12C32]
gi|423725455|ref|ZP_17699592.1| hypothetical protein HMPREF1078_03481 [Parabacteroides merdae
CL09T00C40]
gi|154085803|gb|EDN84848.1| hypothetical protein PARMER_03714 [Parabacteroides merdae ATCC
43184]
gi|409218592|gb|EKN11560.1| hypothetical protein HMPREF1060_02290 [Parabacteroides merdae
CL03T12C32]
gi|409234579|gb|EKN27407.1| hypothetical protein HMPREF1078_03481 [Parabacteroides merdae
CL09T00C40]
Length = 80
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+++ V NL YR DDL++V E G V + I +DR T +S+GF FV
Sbjct: 1 MNIYVGNLNYRVREDDLKQVMEEYGTVESVKIIKDRETGKSKGFGFV 47
>gi|354556704|ref|ZP_08975994.1| RNP-1 like RNA-binding protein [Cyanothece sp. ATCC 51472]
gi|353551316|gb|EHC20722.1| RNP-1 like RNA-binding protein [Cyanothece sp. ATCC 51472]
Length = 94
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 28/47 (59%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+S+ V NL+Y T DL VF G V + IP DR T +SRGF FV
Sbjct: 1 MSIYVGNLSYEVTQVDLEEVFGEYGTVKRVQIPSDRETGKSRGFGFV 47
>gi|351702148|gb|EHB05067.1| Heterogeneous nuclear ribonucleoprotein A3 [Heterocephalus
glaber]
Length = 181
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 31/57 (54%)
Query: 4 GRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
G P E + L + L++ TT D LR FE+ G + D + RD T+ SRGF FV
Sbjct: 22 GHDPKEPEQLSKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFV 78
>gi|258597221|ref|XP_001347758.2| nucleic acid binding protein, putative [Plasmodium falciparum 3D7]
gi|254832603|gb|AAN35671.2| nucleic acid binding protein, putative [Plasmodium falciparum 3D7]
Length = 588
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 22/45 (48%), Positives = 27/45 (60%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
L V L TT + LR FE+ GE+ DIY+P D +T RG AFV
Sbjct: 504 LFVTKLNSATTIEKLRNYFEKFGEIIDIYMPNDVYTNRPRGIAFV 548
>gi|159026366|emb|CAO88917.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 97
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 32/47 (68%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+S+ V NL+Y + +DL VF+ G+V ++IP D+ T+ RGFAFV
Sbjct: 1 MSIFVGNLSYEISQEDLVEVFQDYGKVKRVHIPVDKDTQRKRGFAFV 47
>gi|409992615|ref|ZP_11275795.1| RNA-binding protein [Arthrospira platensis str. Paraca]
gi|291568118|dbj|BAI90390.1| RNA-binding protein [Arthrospira platensis NIES-39]
gi|409936532|gb|EKN78016.1| RNA-binding protein [Arthrospira platensis str. Paraca]
Length = 94
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 31/47 (65%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+S+ V NL+Y T +DL+ VF G V +++P DR T + RGFAFV
Sbjct: 1 MSIYVGNLSYDVTDEDLKEVFAEYGTVKRVHLPTDRETGKFRGFAFV 47
>gi|67469403|ref|XP_650680.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|56467330|gb|EAL45294.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|449708457|gb|EMD47913.1| RNA recognition domain containing protein [Entamoeba histolytica
KU27]
Length = 135
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 31/46 (67%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
S+ V N+ Y TT ++L +FERCG V + IP ++FT+ + G+A +
Sbjct: 40 SVHVSNVEYTTTKEELEDLFERCGVVLKVNIPINQFTQTTMGYANI 85
>gi|338214373|ref|YP_004658434.1| RNP-1 like RNA-binding protein [Runella slithyformis DSM 19594]
gi|336308200|gb|AEI51302.1| RNP-1 like RNA-binding protein [Runella slithyformis DSM 19594]
Length = 127
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 31/47 (65%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+++ V N+ ++ D+LR +FE GEV I D+FT +SRGFAFV
Sbjct: 1 MNIYVANVPFKANDDELRELFEEFGEVSSARIIMDKFTGKSRGFAFV 47
>gi|298484464|ref|ZP_07002618.1| RNA-binding protein [Bacteroides sp. D22]
gi|336402120|ref|ZP_08582862.1| hypothetical protein HMPREF0127_00175 [Bacteroides sp. 1_1_30]
gi|295084312|emb|CBK65835.1| RNA-binding proteins (RRM domain) [Bacteroides xylanisolvens
XB1A]
gi|298269373|gb|EFI10980.1| RNA-binding protein [Bacteroides sp. D22]
gi|335944441|gb|EGN06262.1| hypothetical protein HMPREF0127_00175 [Bacteroides sp. 1_1_30]
Length = 81
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
++L + NL+Y DLR V E G V + + DR TR S+GFAF+
Sbjct: 1 MNLYIGNLSYNVKESDLRNVMEEYGTVASVKLITDRETRRSKGFAFI 47
>gi|218438646|ref|YP_002376975.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7424]
gi|218171374|gb|ACK70107.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7424]
Length = 105
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 28/47 (59%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+++ V NL Y T D+LR VF G V +Y+P DR T RGF FV
Sbjct: 1 MAIYVGNLYYEVTQDELREVFAEYGTVSRVYLPVDRETGRMRGFGFV 47
>gi|354472305|ref|XP_003498380.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like
[Cricetulus griseus]
Length = 423
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 32/59 (54%)
Query: 2 SYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
S G P E + L + L++ TT D LR FE+ G + D + RD T+ SRGF FV
Sbjct: 67 SPGHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFV 125
>gi|196234692|ref|ZP_03133505.1| RNP-1 like RNA-binding protein [Chthoniobacter flavus Ellin428]
gi|196221240|gb|EDY15797.1| RNP-1 like RNA-binding protein [Chthoniobacter flavus Ellin428]
Length = 126
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 29/45 (64%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
L V NL++ TT DL+ F G V ++ + +D+FT SRGFAFV
Sbjct: 5 LYVGNLSFDTTEVDLQDAFAEAGTVQEVALMQDKFTGRSRGFAFV 49
>gi|428298449|ref|YP_007136755.1| RNP-1 like RNA-binding protein [Calothrix sp. PCC 6303]
gi|428234993|gb|AFZ00783.1| RNP-1 like RNA-binding protein [Calothrix sp. PCC 6303]
Length = 95
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 30/47 (63%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+++ V NL+YR T DLR VF GEV + +P DR + RGFAFV
Sbjct: 1 MTIYVGNLSYRATEADLRAVFADYGEVKRVVLPTDRESGRLRGFAFV 47
>gi|393235917|gb|EJD43469.1| translation initiation factor 3, RNA-binding subunit [Auricularia
delicata TFB-10046 SS5]
Length = 299
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 35/56 (62%)
Query: 5 RPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
RP + + +L+V N++ TT +DLR +F R G V +YI RDR T +G+AFV
Sbjct: 206 RPGGNRDDLPTLRVTNVSEDTTDNDLRDLFSRFGRVARVYIGRDRETGVGKGYAFV 261
>gi|440755781|ref|ZP_20934983.1| RNA recognition motif family protein [Microcystis aeruginosa
TAIHU98]
gi|440175987|gb|ELP55356.1| RNA recognition motif family protein [Microcystis aeruginosa
TAIHU98]
Length = 97
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 31/47 (65%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+S+ V NL+Y + DDL VF G+V ++IP D+ T+ RGFAFV
Sbjct: 1 MSIFVGNLSYDISQDDLVEVFTDYGKVQRVHIPVDKETQRKRGFAFV 47
>gi|194336480|ref|YP_002018274.1| RNP-1 like RNA-binding protein [Pelodictyon phaeoclathratiforme
BU-1]
gi|194308957|gb|ACF43657.1| RNP-1 like RNA-binding protein [Pelodictyon phaeoclathratiforme
BU-1]
Length = 95
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 28/48 (58%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
+++ + NL Y + DDLR F GEV + I D+F+ S+GF FV
Sbjct: 1 MNIYIGNLAYTVSEDDLRDAFSEFGEVANASIINDKFSGRSKGFGFVE 48
>gi|150003131|ref|YP_001297875.1| RNA-binding protein [Bacteroides vulgatus ATCC 8482]
gi|319640487|ref|ZP_07995208.1| RNA-binding protein [Bacteroides sp. 3_1_40A]
gi|345518010|ref|ZP_08797470.1| hypothetical protein BSFG_01661 [Bacteroides sp. 4_3_47FAA]
gi|423313684|ref|ZP_17291620.1| hypothetical protein HMPREF1058_02232 [Bacteroides vulgatus
CL09T03C04]
gi|149931555|gb|ABR38253.1| putative RNA-binding protein [Bacteroides vulgatus ATCC 8482]
gi|254835205|gb|EET15514.1| hypothetical protein BSFG_01661 [Bacteroides sp. 4_3_47FAA]
gi|317387865|gb|EFV68723.1| RNA-binding protein [Bacteroides sp. 3_1_40A]
gi|392684619|gb|EIY77943.1| hypothetical protein HMPREF1058_02232 [Bacteroides vulgatus
CL09T03C04]
Length = 81
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 29/47 (61%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+++ V NL+Y DLR V E G VG + + DR TR S+GFAFV
Sbjct: 1 MNMYVGNLSYNVKEVDLREVMEEYGTVGSVKLIIDRDTRRSKGFAFV 47
>gi|434386342|ref|YP_007096953.1| RRM domain-containing RNA-binding protein [Chamaesiphon minutus
PCC 6605]
gi|428017332|gb|AFY93426.1| RRM domain-containing RNA-binding protein [Chamaesiphon minutus
PCC 6605]
Length = 95
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 31/47 (65%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+++ + NL+Y+ T +DL+ VFE G V + +P DR T RGFAFV
Sbjct: 1 MTIYIGNLSYQATEEDLKTVFEDYGTVKRVVLPTDRETGRMRGFAFV 47
>gi|170098488|ref|XP_001880463.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164644901|gb|EDR09150.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 154
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 27/43 (62%)
Query: 18 VDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
V NL++ TT D LR+ F G+V D + RDR T SRGF FV
Sbjct: 7 VGNLSWNTTDDTLRQAFSEFGQVLDSIVMRDRDTGRSRGFGFV 49
>gi|425781282|gb|EKV19258.1| hypothetical protein PDIG_04180 [Penicillium digitatum PHI26]
gi|425783364|gb|EKV21218.1| hypothetical protein PDIP_08850 [Penicillium digitatum Pd1]
Length = 162
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 30/49 (61%)
Query: 13 MVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
M L V L++ T+ D LR F++ GE+ + + +DR T SRGF FVR
Sbjct: 1 MSKLFVHGLSWHTSDDTLREGFQQFGEIQEAIVVKDRATLRSRGFGFVR 49
>gi|434389333|ref|YP_007099944.1| RRM domain-containing RNA-binding protein [Chamaesiphon minutus
PCC 6605]
gi|428020323|gb|AFY96417.1| RRM domain-containing RNA-binding protein [Chamaesiphon minutus
PCC 6605]
Length = 93
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 29/47 (61%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+S+ V NL+Y T DDL + F G+V + +P DR T RGFAFV
Sbjct: 1 MSIYVGNLSYEVTQDDLTQTFAEYGKVKRVQLPTDRETGRLRGFAFV 47
>gi|427382637|ref|ZP_18879357.1| hypothetical protein HMPREF9447_00390 [Bacteroides oleiciplenus
YIT 12058]
gi|425729882|gb|EKU92733.1| hypothetical protein HMPREF9447_00390 [Bacteroides oleiciplenus
YIT 12058]
Length = 130
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 29/48 (60%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
+++ V NL++ T D L+ +F + GEV YI DR T SRGF FV
Sbjct: 1 MNIYVANLSWNTNSDSLQELFTQYGEVTSAYIINDRETGRSRGFGFVE 48
>gi|255692575|ref|ZP_05416250.1| RNA-binding protein [Bacteroides finegoldii DSM 17565]
gi|423300001|ref|ZP_17278026.1| hypothetical protein HMPREF1057_01167 [Bacteroides finegoldii
CL09T03C10]
gi|260621722|gb|EEX44593.1| hypothetical protein BACFIN_07718 [Bacteroides finegoldii DSM
17565]
gi|408473810|gb|EKJ92332.1| hypothetical protein HMPREF1057_01167 [Bacteroides finegoldii
CL09T03C10]
Length = 81
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
++L + NL+Y DLR V E G V + + DR TR S+GFAF+
Sbjct: 1 MNLYIGNLSYNVKESDLRNVMEEYGTVASVKLITDRETRRSKGFAFI 47
>gi|425469436|ref|ZP_18848373.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC
9701]
gi|389880880|emb|CCI38494.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC
9701]
Length = 100
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 31/47 (65%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+S+ V NL+Y + +DL VF G+V ++IP DR T+ RGFAFV
Sbjct: 1 MSIFVGNLSYEISQEDLVDVFAEYGKVKRVHIPVDRDTQRKRGFAFV 47
>gi|148707568|gb|EDL39515.1| mCG1047313 [Mus musculus]
Length = 316
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 31/57 (54%)
Query: 4 GRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
G P E + L + L++ TT D LR FE+ G + D + RD T+ SRGF FV
Sbjct: 3 GHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFV 59
>gi|388511807|gb|AFK43965.1| unknown [Lotus japonicus]
Length = 191
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 31/58 (53%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
YGR P E + V +L T +DLR+ F R G + D+YIPRD RGF FV
Sbjct: 44 YGRGEPAREVGKKIFVGHLPQEATTEDLRQYFGRFGHILDVYIPRDAKRSGHRGFGFV 101
>gi|327284183|ref|XP_003226818.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 homolog
1-like [Anolis carolinensis]
Length = 386
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 31/57 (54%)
Query: 4 GRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
G P E + L + L++ TT D LR FE+ G + D + RD T+ SRGF FV
Sbjct: 27 GHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFV 83
>gi|345870533|ref|ZP_08822485.1| RNP-1 like RNA-binding protein [Thiorhodococcus drewsii AZ1]
gi|343921736|gb|EGV32449.1| RNP-1 like RNA-binding protein [Thiorhodococcus drewsii AZ1]
Length = 92
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 27/43 (62%)
Query: 18 VDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
V NL Y T DDLR +F GE+ + +D+F+ +S+GF FV
Sbjct: 5 VGNLPYSVTDDDLRTIFSEFGELAAAEVIKDKFSGQSKGFGFV 47
>gi|172038014|ref|YP_001804515.1| RNA-binding protein [Cyanothece sp. ATCC 51142]
gi|171699468|gb|ACB52449.1| RNA-binding protein [Cyanothece sp. ATCC 51142]
Length = 108
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 28/47 (59%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+S+ V NL+Y T DL VF G V + IP DR T +SRGF FV
Sbjct: 15 MSIYVGNLSYEVTQVDLEEVFGEYGTVKRVQIPSDRETGKSRGFGFV 61
>gi|126347016|ref|XP_001368514.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like,
partial [Monodelphis domestica]
Length = 356
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 31/57 (54%)
Query: 4 GRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
G P E + L + L++ TT D LR FE+ G + D + RD T+ SRGF FV
Sbjct: 1 GHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFV 57
>gi|388511899|gb|AFK44011.1| unknown [Lotus japonicus]
Length = 220
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 31/58 (53%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
YGR P E + V +L T +DLR+ F R G + D+YIPRD RGF FV
Sbjct: 73 YGRGEPAREVGKKIFVGHLPQEATTEDLRQYFGRFGHILDVYIPRDAKRSGHRGFGFV 130
>gi|74004700|ref|XP_862045.1| PREDICTED: uncharacterized protein LOC608074 isoform 11 [Canis
lupus familiaris]
gi|410968906|ref|XP_003990940.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 isoform 2
[Felis catus]
Length = 356
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 31/57 (54%)
Query: 4 GRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
G P E + L + L++ TT D LR FE+ G + D + RD T+ SRGF FV
Sbjct: 3 GHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFV 59
>gi|157277969|ref|NP_444493.1| heterogeneous nuclear ribonucleoprotein A3 isoform c [Mus
musculus]
gi|162329579|ref|NP_001104765.1| heterogeneous nuclear ribonucleoprotein A3 isoform b [Rattus
norvegicus]
gi|335303045|ref|XP_003359613.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like
isoform 2 [Sus scrofa]
gi|25991929|gb|AAN76992.1|AF463524_1 ribonucleoprotein heterogeneous nuclear ribonucleoprotein A3 [Mus
musculus]
gi|23274114|gb|AAH23828.1| Hnrpa3 protein [Mus musculus]
gi|34327779|gb|AAQ63631.1| heterogeneous nuclear ribonucleoprotein A3 variant b [Rattus
norvegicus]
gi|111599310|gb|AAI16251.1| Hnrpa3 protein [Mus musculus]
gi|111599547|gb|AAI16252.1| Hnrpa3 protein [Mus musculus]
gi|148695243|gb|EDL27190.1| mCG1305, isoform CRA_d [Mus musculus]
gi|148695244|gb|EDL27191.1| mCG1305, isoform CRA_d [Mus musculus]
gi|148703315|gb|EDL35262.1| mCG48756 [Mus musculus]
gi|149022302|gb|EDL79196.1| rCG27231, isoform CRA_a [Rattus norvegicus]
gi|149022303|gb|EDL79197.1| rCG27231, isoform CRA_a [Rattus norvegicus]
gi|149022304|gb|EDL79198.1| rCG27231, isoform CRA_a [Rattus norvegicus]
gi|149022305|gb|EDL79199.1| rCG27231, isoform CRA_a [Rattus norvegicus]
gi|187957410|gb|AAI58039.1| Heterogeneous nuclear ribonucleoprotein A3 [Mus musculus]
gi|187957412|gb|AAI57920.1| Heterogeneous nuclear ribonucleoprotein A3 [Mus musculus]
Length = 357
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 31/57 (54%)
Query: 4 GRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
G P E + L + L++ TT D LR FE+ G + D + RD T+ SRGF FV
Sbjct: 3 GHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFV 59
>gi|148695240|gb|EDL27187.1| mCG1305, isoform CRA_a [Mus musculus]
Length = 351
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 31/57 (54%)
Query: 4 GRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
G P E + L + L++ TT D LR FE+ G + D + RD T+ SRGF FV
Sbjct: 3 GHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFV 59
>gi|397489099|ref|XP_003815574.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 isoform 2
[Pan paniscus]
gi|426337838|ref|XP_004032902.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 isoform 2
[Gorilla gorilla gorilla]
gi|119631468|gb|EAX11063.1| heterogeneous nuclear ribonucleoprotein A3, isoform CRA_a [Homo
sapiens]
gi|119631470|gb|EAX11065.1| heterogeneous nuclear ribonucleoprotein A3, isoform CRA_a [Homo
sapiens]
gi|194375464|dbj|BAG56677.1| unnamed protein product [Homo sapiens]
gi|221046256|dbj|BAH14805.1| unnamed protein product [Homo sapiens]
Length = 356
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 31/57 (54%)
Query: 4 GRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
G P E + L + L++ TT D LR FE+ G + D + RD T+ SRGF FV
Sbjct: 3 GHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFV 59
>gi|197098694|ref|NP_001125266.1| heterogeneous nuclear ribonucleoprotein A3 [Pongo abelii]
gi|55727504|emb|CAH90507.1| hypothetical protein [Pongo abelii]
Length = 355
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 31/57 (54%)
Query: 4 GRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
G P E + L + L++ TT D LR FE+ G + D + RD T+ SRGF FV
Sbjct: 3 GHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFV 59
>gi|336409914|ref|ZP_08590396.1| hypothetical protein HMPREF1018_02412 [Bacteroides sp. 2_1_56FAA]
gi|335946295|gb|EGN08101.1| hypothetical protein HMPREF1018_02412 [Bacteroides sp. 2_1_56FAA]
Length = 60
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 31/47 (65%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+++ + NL+YR DLR+V E G V + + DR TR+S+GFAFV
Sbjct: 1 MNMYIGNLSYRVKEADLRQVMEEYGTVDSVKLIIDRETRKSKGFAFV 47
>gi|302821717|ref|XP_002992520.1| hypothetical protein SELMODRAFT_47876 [Selaginella
moellendorffii]
gi|300139722|gb|EFJ06458.1| hypothetical protein SELMODRAFT_47876 [Selaginella
moellendorffii]
Length = 125
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 28/43 (65%)
Query: 18 VDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
V NL + T DL +F + G+VG + + +DR TR+S+G AF+
Sbjct: 14 VSNLDFSLTNSDLYTIFSKMGKVGKVTVMKDRVTRQSKGVAFI 56
>gi|148697232|gb|EDL29179.1| mCG1035404 [Mus musculus]
Length = 239
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 31/57 (54%)
Query: 4 GRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
G P E + L + L++ TT D LR FE+ G + D + RD T+ SRGF FV
Sbjct: 3 GHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFV 59
>gi|324537487|gb|ADY49506.1| Polyadenylate-binding protein 2, partial [Ascaris suum]
Length = 127
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 9/69 (13%)
Query: 1 MSYGRPPPRIEGMVSLKVD---------NLTYRTTPDDLRRVFERCGEVGDIYIPRDRFT 51
M+ RPP RI + KV+ N+ T D+LR F CG V + IP D+FT
Sbjct: 39 MNSSRPPARIYASLEDKVEADNRSIYIGNVGCFATADELRAHFYGCGSVNRVTIPTDKFT 98
Query: 52 RESRGFAFV 60
+GFA++
Sbjct: 99 GHPKGFAYM 107
>gi|189234126|ref|XP_969016.2| PREDICTED: similar to mammalian A1, A2 /B1 hnRNP homologue
[Tribolium castaneum]
gi|270002487|gb|EEZ98934.1| hypothetical protein TcasGA2_TC004556 [Tribolium castaneum]
Length = 338
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 32/53 (60%)
Query: 8 PRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
P E L + L YRTT + L++ FE+ GE+ D+ + +D T+ SRGF F+
Sbjct: 13 PEHEQYRKLFIGGLDYRTTDESLKKHFEKWGEIVDVVVMKDPTTKRSRGFGFI 65
>gi|431930897|ref|YP_007243943.1| RRM domain-containing RNA-binding protein [Thioflavicoccus
mobilis 8321]
gi|431829200|gb|AGA90313.1| RRM domain-containing RNA-binding protein [Thioflavicoccus
mobilis 8321]
Length = 90
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 27/47 (57%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+++ V NL Y DLR F R GEV + + DR T ES+GF FV
Sbjct: 1 MNIYVGNLPYNVKDADLRETFSRFGEVSQVTVIMDRLTGESKGFGFV 47
>gi|348580545|ref|XP_003476039.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like [Cavia
porcellus]
Length = 355
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 31/57 (54%)
Query: 4 GRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
G P E + L + L++ TT D LR FE+ G + D + RD T+ SRGF FV
Sbjct: 3 GHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFV 59
>gi|213625123|gb|AAI69881.1| Unknown (protein for MGC:196608) [Xenopus laevis]
Length = 348
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 23/57 (40%), Positives = 32/57 (56%)
Query: 4 GRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
G P E + L + L++ TT D LR FE+ G++ D + RD T+ SRGF FV
Sbjct: 17 GHEPKEPEQLRKLFIGGLSFETTDDSLREHFEQWGKLTDCVVMRDPQTKRSRGFGFV 73
>gi|187956922|gb|AAI58075.1| EG627828 protein [Mus musculus]
gi|187956950|gb|AAI57905.1| EG627828 protein [Mus musculus]
gi|219521461|gb|AAI72011.1| EG627828 protein [Mus musculus]
Length = 351
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 31/57 (54%)
Query: 4 GRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
G P E + L + L++ TT D LR FE+ G + D + RD T+ SRGF FV
Sbjct: 3 GHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFV 59
>gi|313146963|ref|ZP_07809156.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
gi|424663365|ref|ZP_18100402.1| hypothetical protein HMPREF1205_03751 [Bacteroides fragilis HMW
616]
gi|313135730|gb|EFR53090.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
gi|404577055|gb|EKA81793.1| hypothetical protein HMPREF1205_03751 [Bacteroides fragilis HMW
616]
Length = 81
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+++ V NL+Y DLR+V E G V + + DR TR S+GFAFV
Sbjct: 1 MNMYVGNLSYNVKESDLRQVMEEYGTVESVKLITDRETRRSKGFAFV 47
>gi|259013338|ref|NP_001158364.1| musashi homolog 2 [Saccoglossus kowalevskii]
gi|32307763|gb|AAP79278.1| musashi nrp-1 [Saccoglossus kowalevskii]
Length = 394
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 19/43 (44%), Positives = 29/43 (67%)
Query: 18 VDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+ L+++TTPD LR F + GEV + + RD+ T+ SRGF F+
Sbjct: 25 IGGLSWQTTPDGLREYFSKFGEVTECMVMRDQATKRSRGFGFI 67
>gi|34785465|gb|AAH57655.1| Hnrpa3 protein, partial [Mus musculus]
Length = 303
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 31/57 (54%)
Query: 4 GRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
G P E + L + L++ TT D LR FE+ G + D + RD T+ SRGF FV
Sbjct: 3 GHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFV 59
>gi|422302285|ref|ZP_16389648.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC
9806]
gi|389788536|emb|CCI15746.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC
9806]
Length = 106
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 31/47 (65%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+S+ V NL+Y + +DL VF+ G+V ++IP D+ T RGFAFV
Sbjct: 1 MSIFVGNLSYEISQEDLVEVFQDYGKVKRVHIPIDKATSRKRGFAFV 47
>gi|380695480|ref|ZP_09860339.1| RNA-binding protein [Bacteroides faecis MAJ27]
Length = 81
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 27/48 (56%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
++L + NL Y DLR V E G V + + DR TR S+GFAF+
Sbjct: 1 MNLYIGNLNYNVKESDLRNVMEEYGAVASVKLITDRETRRSKGFAFIE 48
>gi|220905698|ref|YP_002481009.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7425]
gi|219862309|gb|ACL42648.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7425]
Length = 90
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+++ + NL+Y+ T +DLR VF G + I +P DR T RGFAFV
Sbjct: 1 MTIYIGNLSYQATENDLREVFAEYGTIKRITLPIDRETGRMRGFAFV 47
>gi|67923265|ref|ZP_00516750.1| RNA-binding region RNP-1 (RNA recognition motif) [Crocosphaera
watsonii WH 8501]
gi|67854891|gb|EAM50165.1| RNA-binding region RNP-1 (RNA recognition motif) [Crocosphaera
watsonii WH 8501]
Length = 94
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+S+ V NL+Y +DL VF G V ++IP+DR + RGFAFV
Sbjct: 1 MSIYVGNLSYDVNKEDLEEVFTEYGSVKRVHIPKDRESGRMRGFAFV 47
>gi|427712046|ref|YP_007060670.1| RRM domain-containing RNA-binding protein [Synechococcus sp. PCC
6312]
gi|427376175|gb|AFY60127.1| RRM domain-containing RNA-binding protein [Synechococcus sp. PCC
6312]
Length = 81
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 31/47 (65%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
++L V NL+Y T ++LR +F + G V + +P DR T + RGFAFV
Sbjct: 1 MTLYVGNLSYDATEENLREIFAKHGTVKRVVLPVDRETGKRRGFAFV 47
>gi|302816982|ref|XP_002990168.1| hypothetical protein SELMODRAFT_7444 [Selaginella moellendorffii]
gi|300142023|gb|EFJ08728.1| hypothetical protein SELMODRAFT_7444 [Selaginella moellendorffii]
Length = 124
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 28/43 (65%)
Query: 18 VDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
V NL + T DL +F + G+VG + + +DR TR+S+G AF+
Sbjct: 13 VSNLDFALTNSDLYTIFSKMGKVGKVTVMKDRVTRQSKGVAFI 55
>gi|390473557|ref|XP_003734621.1| PREDICTED: serine/arginine-rich splicing factor 10-like
[Callithrix jacchus]
Length = 262
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 31/48 (64%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
SL V N+ T +DLRR F R G + D+Y+P D +TR RGFA+V+
Sbjct: 10 TSLFVRNVANDTRSEDLRREFGRYGPIVDVYVPPDFYTRRPRGFAYVQ 57
>gi|220910060|ref|YP_002485371.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7425]
gi|219866671|gb|ACL47010.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7425]
Length = 99
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+S+ V NL+Y T +DL + F G V +++P DR T RGFAFV
Sbjct: 1 MSIYVGNLSYSVTQNDLIQAFTEYGSVKSVHLPTDRETGRLRGFAFV 47
>gi|397576490|gb|EJK50286.1| hypothetical protein THAOC_30767 [Thalassiosira oceanica]
Length = 397
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 25/56 (44%), Positives = 29/56 (51%)
Query: 5 RPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
RP L V NL++ T LR +F G V D YIP DR T + RGFAFV
Sbjct: 276 RPAAAAPKETKLYVGNLSWGTEEGALRELFGEYGSVIDCYIPTDRETGQHRGFAFV 331
Score = 39.3 bits (90), Expect = 0.34, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 9 RIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
R EG + V NL + TT +DL+ FE G+V D ++P D + +RGF F++
Sbjct: 192 RDEG-AKIYVGNLNFDTTAEDLKAAFEEFGDVMDCFLPVD-YDGNARGFGFIQ 242
>gi|428768452|ref|YP_007160242.1| RNP-1 like RNA-binding protein [Cyanobacterium aponinum PCC
10605]
gi|428682731|gb|AFZ52198.1| RNP-1 like RNA-binding protein [Cyanobacterium aponinum PCC
10605]
Length = 101
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 28/47 (59%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+S+ V NL Y T +DL VF G V ++IP DR T RGFAFV
Sbjct: 1 MSIYVGNLPYEVTSEDLMEVFAEYGTVSRVHIPTDRETGRMRGFAFV 47
>gi|29346194|ref|NP_809697.1| RNA-binding protein [Bacteroides thetaiotaomicron VPI-5482]
gi|383122458|ref|ZP_09943151.1| hypothetical protein BSIG_0801 [Bacteroides sp. 1_1_6]
gi|29338089|gb|AAO75891.1| putative RNA-binding protein [Bacteroides thetaiotaomicron
VPI-5482]
gi|251842448|gb|EES70528.1| hypothetical protein BSIG_0801 [Bacteroides sp. 1_1_6]
Length = 81
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 27/48 (56%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
++L + NL Y DLR V E G V + + DR TR S+GFAF+
Sbjct: 1 MNLYIGNLNYNVKESDLRNVMEEYGAVASVKLITDRETRRSKGFAFIE 48
>gi|427710388|ref|YP_007052765.1| RNP-1 like RNA-binding protein [Nostoc sp. PCC 7107]
gi|427362893|gb|AFY45615.1| RNP-1 like RNA-binding protein [Nostoc sp. PCC 7107]
Length = 106
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 27/47 (57%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+S+ V NL+Y T D L VF G V I IP DR T RGFAFV
Sbjct: 1 MSIYVGNLSYEVTQDALNSVFAEYGSVKRIQIPTDRETGRLRGFAFV 47
>gi|75908205|ref|YP_322501.1| RNA-binding region RNP-1 [Anabaena variabilis ATCC 29413]
gi|75701930|gb|ABA21606.1| RNA-binding region RNP-1 [Anabaena variabilis ATCC 29413]
Length = 109
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+S+ + NL+Y+ T +DL+ F G+V + +P DR T RGFAFV
Sbjct: 1 MSIYIGNLSYQVTEEDLKLAFAEYGKVSRVQLPTDRETGRPRGFAFV 47
>gi|17232175|ref|NP_488723.1| RNA-binding protein [Nostoc sp. PCC 7120]
gi|6274493|gb|AAF06670.1|AF196328_2 RbpD [Nostoc sp. PCC 7120]
gi|1064777|dbj|BAA08402.1| RNA-binding protein [Anabaena variabilis]
gi|17133820|dbj|BAB76382.1| RNA-binding protein [Nostoc sp. PCC 7120]
Length = 110
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 30/48 (62%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
+S+ + NL+Y+ T +DL+ F G+V + +P DR T RGFAFV
Sbjct: 1 MSIYIGNLSYQVTEEDLKLAFAEYGKVSRVQLPTDRETGRPRGFAFVE 48
>gi|425448844|ref|ZP_18828688.1| putative RNA-binding protein rbpE [Microcystis aeruginosa PCC
7941]
gi|389767705|emb|CCI06977.1| putative RNA-binding protein rbpE [Microcystis aeruginosa PCC
7941]
Length = 97
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 30/47 (63%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+S+ V NL+Y + DDL VF+ G V ++IP D+ T RGFAFV
Sbjct: 1 MSIFVGNLSYDISQDDLVEVFKEYGNVQRVHIPVDKETGRKRGFAFV 47
>gi|170078237|ref|YP_001734875.1| RNA-binding protein [Synechococcus sp. PCC 7002]
gi|169885906|gb|ACA99619.1| RNA-binding protein [Synechococcus sp. PCC 7002]
Length = 95
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+S+ + NL+Y+ T +DL+ F G+V + +P DR T RGFAFV
Sbjct: 1 MSIYIGNLSYQVTDEDLKETFAEYGKVNRVQVPTDRETGRPRGFAFV 47
>gi|428312725|ref|YP_007123702.1| RRM domain-containing RNA-binding protein [Microcoleus sp. PCC
7113]
gi|428254337|gb|AFZ20296.1| RRM domain-containing RNA-binding protein [Microcoleus sp. PCC
7113]
Length = 100
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 28/47 (59%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+S+ V NL+Y T +DL VF G V I +P DR T RGFAFV
Sbjct: 1 MSIYVGNLSYEVTQEDLSAVFAEYGSVKRIQLPTDRETGRLRGFAFV 47
>gi|443711728|gb|ELU05368.1| hypothetical protein CAPTEDRAFT_102638 [Capitella teleta]
Length = 102
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 28/46 (60%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+L + NL Y +DL + FE G + DI + RDR T SRGFAF+
Sbjct: 5 TLYIGNLAYTAVEEDLEQAFESFGVIEDIKLMRDRETDRSRGFAFI 50
>gi|432096566|gb|ELK27213.1| Heterogeneous nuclear ribonucleoprotein A1 [Myotis davidii]
Length = 117
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 32/60 (53%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MS P E + L + L++ TT + LR FE+ G + D + RD T+ SRGF FV
Sbjct: 1 MSKSESPKEPEQLWKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFV 60
>gi|427415161|ref|ZP_18905346.1| RRM domain-containing RNA-binding protein [Leptolyngbya sp. PCC
7375]
gi|425755926|gb|EKU96785.1| RRM domain-containing RNA-binding protein [Leptolyngbya sp. PCC
7375]
Length = 81
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 28/47 (59%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+S+ V NL++ T DDL + F G V ++P DR T RGFAFV
Sbjct: 1 MSIYVGNLSFDVTQDDLNQAFSEYGTVKSTHLPTDRETGRKRGFAFV 47
>gi|425440323|ref|ZP_18820628.1| putative RNA-binding protein rbpA [Microcystis aeruginosa PCC
9717]
gi|389719274|emb|CCH96866.1| putative RNA-binding protein rbpA [Microcystis aeruginosa PCC
9717]
Length = 97
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 31/47 (65%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+S+ V NL+Y + +DL VF G+V ++IP D+ T+ RGFAFV
Sbjct: 1 MSIFVGNLSYEISQEDLVDVFAEYGKVKRVHIPLDKETQRKRGFAFV 47
>gi|430745977|ref|YP_007205106.1| RRM domain-containing RNA-binding protein [Singulisphaera
acidiphila DSM 18658]
gi|430017697|gb|AGA29411.1| RRM domain-containing RNA-binding protein [Singulisphaera
acidiphila DSM 18658]
Length = 130
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
++ V NL Y TT DDL+++FE G V + + D+F+ SRGF FV
Sbjct: 4 NIYVGNLPYDTTGDDLKQLFETYGAVSNGQVIIDKFSGRSRGFGFVE 50
>gi|71013252|ref|XP_758567.1| hypothetical protein UM02420.1 [Ustilago maydis 521]
gi|46098225|gb|EAK83458.1| hypothetical protein UM02420.1 [Ustilago maydis 521]
Length = 588
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 22/43 (51%), Positives = 27/43 (62%)
Query: 18 VDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+ L + TT D LRR F + GEVG+ I RD T SRGFAF+
Sbjct: 173 IGGLNWDTTEDSLRRYFSQFGEVGNCAIMRDNMTGRSRGFAFL 215
>gi|392562711|gb|EIW55891.1| translation initiation factor 3 RNA-binding subunit [Trametes
versicolor FP-101664 SS1]
Length = 292
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%)
Query: 2 SYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+ GRP + + +L+V N++ T +DLR +F G V +Y+ RDR T +GFAFV
Sbjct: 198 AMGRPGGNRDDLPTLRVTNISEDTQENDLRDLFGVFGRVARVYVGRDRETGAGKGFAFV 256
>gi|416401897|ref|ZP_11687293.1| RNA-binding protein [Crocosphaera watsonii WH 0003]
gi|357261987|gb|EHJ11191.1| RNA-binding protein [Crocosphaera watsonii WH 0003]
Length = 94
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+S+ V NL+Y +DL VF G V ++IP+DR + RGFAFV
Sbjct: 1 MSIYVGNLSYDVNKEDLEEVFTEYGSVKRVHIPKDRESGRVRGFAFV 47
>gi|410095935|ref|ZP_11290927.1| hypothetical protein HMPREF1076_00105 [Parabacteroides
goldsteinii CL02T12C30]
gi|409227966|gb|EKN20861.1| hypothetical protein HMPREF1076_00105 [Parabacteroides
goldsteinii CL02T12C30]
Length = 81
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 31/47 (65%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+++ + NL YR +DL++V E G V + I +DR T +S+GFAFV
Sbjct: 1 MNIYIGNLNYRVREEDLKQVMEEYGVVDSVKIIKDRETGKSKGFAFV 47
>gi|349804307|gb|AEQ17626.1| putative heterogeneous nuclear ribonucleoprotein A3 [Hymenochirus
curtipes]
Length = 249
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 23/57 (40%), Positives = 32/57 (56%)
Query: 4 GRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
G P E + L + L++ TT D LR FE+ G++ D + RD T+ SRGF FV
Sbjct: 4 GHEPKEPEQLRKLFIGGLSFETTDDSLREHFEQWGKLTDCVVMRDPQTKRSRGFGFV 60
>gi|148905888|gb|ABR16106.1| unknown [Picea sitchensis]
Length = 409
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 2 SYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
S+ PPPR G + V L+ T DLRR F G V D+Y+P+D RGF FV
Sbjct: 260 SFSGPPPRGMGK-KIFVGRLSQEATAGDLRRYFSNFGTVVDVYVPKDARRSGHRGFGFV 317
>gi|218246364|ref|YP_002371735.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 8801]
gi|257059410|ref|YP_003137298.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 8802]
gi|218166842|gb|ACK65579.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 8801]
gi|256589576|gb|ACV00463.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 8802]
Length = 92
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 28/47 (59%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+S+ V NL+Y T DL VF G V +++P DR T RGFAFV
Sbjct: 1 MSIYVGNLSYEVTEADLNSVFAEYGSVKRVHVPTDRDTGRPRGFAFV 47
>gi|449266230|gb|EMC77309.1| Heterogeneous nuclear ribonucleoprotein A3 like protein 2,
partial [Columba livia]
Length = 356
Score = 44.3 bits (103), Expect = 0.011, Method: Composition-based stats.
Identities = 23/57 (40%), Positives = 31/57 (54%)
Query: 4 GRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
G P E + L + L++ TT D LR FE+ G + D + RD T+ SRGF FV
Sbjct: 1 GHEPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFV 57
>gi|395534618|ref|XP_003769337.1| PREDICTED: serine/arginine-rich splicing factor 12 [Sarcophilus
harrisii]
Length = 317
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 26/35 (74%)
Query: 27 PDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
P+DLRR F R G + D+YIP D +TR RGFA+V+
Sbjct: 83 PEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQ 117
>gi|296490667|tpg|DAA32780.1| TPA: mCG1035404-like [Bos taurus]
Length = 380
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 31/57 (54%)
Query: 4 GRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
G P E + L + L++ TT D LR FE+ G + D + RD T+ SRGF FV
Sbjct: 25 GHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFV 81
>gi|411119198|ref|ZP_11391578.1| RRM domain-containing RNA-binding protein [Oscillatoriales
cyanobacterium JSC-12]
gi|410711061|gb|EKQ68568.1| RRM domain-containing RNA-binding protein [Oscillatoriales
cyanobacterium JSC-12]
Length = 104
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+S+ V NL+++ T DDL F G+V + +P+DR T RGFAFV
Sbjct: 1 MSVYVGNLSFKVTEDDLVETFSEYGKVVSVQLPKDRETGRMRGFAFV 47
>gi|166365958|ref|YP_001658231.1| RNA binding protein [Microcystis aeruginosa NIES-843]
gi|425466552|ref|ZP_18845850.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC
9809]
gi|166088331|dbj|BAG03039.1| RNA binding protein [Microcystis aeruginosa NIES-843]
gi|389830907|emb|CCI26790.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC
9809]
Length = 98
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+S+ V NL + DD+ VF+ GE+ +++P DR T+ RGFAFV
Sbjct: 1 MSIYVGNLPFEVDQDDVVEVFKEYGEIKRVHLPMDRETKRKRGFAFV 47
>gi|162455777|ref|YP_001618144.1| RNA-binding protein [Sorangium cellulosum So ce56]
gi|161166359|emb|CAN97664.1| RNA-binding protein [Sorangium cellulosum So ce56]
Length = 107
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 28/45 (62%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
L V NL+Y T+ + L F GEV ++ +P DR T + RGFAFV
Sbjct: 5 LYVGNLSYNTSRESLEAAFAGSGEVREVAMPTDRETGQPRGFAFV 49
>gi|428300369|ref|YP_007138675.1| RNP-1 like RNA-binding protein [Calothrix sp. PCC 6303]
gi|428236913|gb|AFZ02703.1| RNP-1 like RNA-binding protein [Calothrix sp. PCC 6303]
Length = 115
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 28/47 (59%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+S+ V NL+Y T DDL +VF G V + +P DR T RGF FV
Sbjct: 1 MSIYVGNLSYSVTQDDLTKVFSEYGTVTRVQLPTDRETGRVRGFGFV 47
>gi|296194380|ref|XP_002744925.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein
A1-like 3-like isoform 1 [Callithrix jacchus]
Length = 320
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 33/60 (55%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MS P + E + L + L++ TT + LR FE+ G + D + RD T+ SRGF FV
Sbjct: 1 MSKSETPKKPEWLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFV 60
>gi|395837290|ref|XP_003791571.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 [Otolemur
garnettii]
Length = 347
Score = 44.3 bits (103), Expect = 0.011, Method: Composition-based stats.
Identities = 23/57 (40%), Positives = 31/57 (54%)
Query: 4 GRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
G P E + L + L++ TT D LR FE+ G + D + RD T+ SRGF FV
Sbjct: 3 GHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFV 59
>gi|449477354|ref|XP_002196178.2| PREDICTED: probable RNA-binding protein 19 [Taeniopygia guttata]
Length = 944
Score = 44.3 bits (103), Expect = 0.011, Method: Composition-based stats.
Identities = 17/45 (37%), Positives = 31/45 (68%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
L V NL + +T +DL ++F + G + +I+ P D+ T++ +GFAF+
Sbjct: 405 LFVRNLPFTSTEEDLEKIFSKYGPLSEIHFPIDKLTKKPKGFAFI 449
>gi|387539574|gb|AFJ70414.1| heterogeneous nuclear ribonucleoprotein A3 [Macaca mulatta]
Length = 378
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 31/57 (54%)
Query: 4 GRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
G P E + L + L++ TT D LR FE+ G + D + RD T+ SRGF FV
Sbjct: 25 GHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFV 81
>gi|224539200|ref|ZP_03679739.1| hypothetical protein BACCELL_04102 [Bacteroides cellulosilyticus
DSM 14838]
gi|423225982|ref|ZP_17212449.1| hypothetical protein HMPREF1062_04635 [Bacteroides
cellulosilyticus CL02T12C19]
gi|427382277|ref|ZP_18878997.1| hypothetical protein HMPREF9447_00030 [Bacteroides oleiciplenus
YIT 12058]
gi|224519185|gb|EEF88290.1| hypothetical protein BACCELL_04102 [Bacteroides cellulosilyticus
DSM 14838]
gi|392631256|gb|EIY25232.1| hypothetical protein HMPREF1062_04635 [Bacteroides
cellulosilyticus CL02T12C19]
gi|425729522|gb|EKU92373.1| hypothetical protein HMPREF9447_00030 [Bacteroides oleiciplenus
YIT 12058]
Length = 81
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 28/47 (59%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
++L V NL Y+ DLR V E G V + I DR TR S+GFAF+
Sbjct: 1 MNLYVGNLNYKVRESDLREVMEEYGTVDSVRIITDRETRRSKGFAFI 47
>gi|432091440|gb|ELK24522.1| Heterogeneous nuclear ribonucleoprotein A1 [Myotis davidii]
Length = 117
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 32/60 (53%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MS P E + L + L++ TT + LR FE+ G + D + RD T+ SRGF FV
Sbjct: 1 MSKSESPKEPEQLQKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFV 60
>gi|351697839|gb|EHB00758.1| Putative heterogeneous nuclear ribonucleoprotein A1-like protein
3 [Heterocephalus glaber]
Length = 236
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 32/60 (53%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MS P E + L + L++ TT + LR FE+ G + D + RD T+ SRGF FV
Sbjct: 1 MSKSESPKESEQLRKLFIQGLSFETTDESLRSCFEQWGMLMDCVVMRDPNTKRSRGFGFV 60
>gi|443319940|ref|ZP_21049081.1| RRM domain-containing RNA-binding protein [Gloeocapsa sp. PCC
73106]
gi|442790348|gb|ELR99940.1| RRM domain-containing RNA-binding protein [Gloeocapsa sp. PCC
73106]
Length = 98
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 31/47 (65%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+S+ V NL+Y T ++L+ VFE G+V +Y+P D T + RGF FV
Sbjct: 1 MSIYVGNLSYNVTQEELKEVFEDYGKVKRVYLPTDPETGKLRGFGFV 47
>gi|440682182|ref|YP_007156977.1| RNP-1 like RNA-binding protein [Anabaena cylindrica PCC 7122]
gi|428679301|gb|AFZ58067.1| RNP-1 like RNA-binding protein [Anabaena cylindrica PCC 7122]
Length = 114
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 28/47 (59%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+S+ V NL+Y T D L +VF G V + IP DR T RGFAFV
Sbjct: 1 MSVYVGNLSYEVTQDALTQVFAEYGSVKRVQIPTDRETGRVRGFAFV 47
>gi|298385583|ref|ZP_06995141.1| RNA-binding protein [Bacteroides sp. 1_1_14]
gi|298261724|gb|EFI04590.1| RNA-binding protein [Bacteroides sp. 1_1_14]
Length = 81
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 27/47 (57%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
++L + NL Y DLR V E G V + + DR TR S+GFAF+
Sbjct: 1 MNLYIGNLNYNVKESDLRNVMEEYGAVASVKLITDRETRRSKGFAFI 47
>gi|288940038|ref|YP_003442278.1| RNP-1 like RNA-binding protein [Allochromatium vinosum DSM 180]
gi|288895410|gb|ADC61246.1| RNP-1 like RNA-binding protein [Allochromatium vinosum DSM 180]
Length = 91
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+++ V NL Y T D+LR F GE+ + + D+FT S+GF FV
Sbjct: 1 MNIYVGNLAYSVTQDELRDAFGAYGEISSVNLITDKFTGSSKGFGFV 47
>gi|168044871|ref|XP_001774903.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673797|gb|EDQ60315.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 257
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 31/47 (65%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
SL V N+ + +DLR FER G V D+Y+PRD +T + RGF FV+
Sbjct: 43 SLLVRNIPRDCSAEDLRIPFERYGVVKDVYLPRDYYTGQPRGFGFVQ 89
>gi|9843655|emb|CAC03601.1| SC35-like splicing factor SCL28, 28 kD [Arabidopsis thaliana]
Length = 236
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 30/50 (60%)
Query: 12 GMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
G L + NL P+DLR FER G + DIY+PR+ + E RGF FV+
Sbjct: 45 GPSGLLIRNLPLDARPNDLRDSFERFGPLKDIYLPRNFNSGEPRGFGFVK 94
>gi|351709863|gb|EHB12782.1| Heterogeneous nuclear ribonucleoprotein A3 [Heterocephalus glaber]
Length = 392
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 31/57 (54%)
Query: 4 GRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
G P E + L + L++ TT D LR FE+ G + D + RD T+ SRGF FV
Sbjct: 89 GHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFV 145
Score = 41.2 bits (95), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 30/54 (55%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
P E + L + L++ TT D LR FE+ G + D + RD T+ SRGF FV
Sbjct: 28 PKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFDFV 81
>gi|256828609|ref|YP_003157337.1| RNP-1 like RNA-binding protein [Desulfomicrobium baculatum DSM
4028]
gi|256577785|gb|ACU88921.1| RNP-1 like RNA-binding protein [Desulfomicrobium baculatum DSM
4028]
Length = 85
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+++ V NL++ TT DL+ +F + GEV ++ DR T SRGF FV
Sbjct: 1 MNIYVGNLSWSTTDADLKSLFSQYGEVTSAHVIEDRATGRSRGFGFV 47
>gi|195490760|ref|XP_002093276.1| GE20857 [Drosophila yakuba]
gi|194179377|gb|EDW92988.1| GE20857 [Drosophila yakuba]
Length = 919
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 19/41 (46%), Positives = 29/41 (70%)
Query: 20 NLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
NL Y TT +DLR++FE+ G V ++ +P D+ TR+ +GF V
Sbjct: 372 NLAYTTTEEDLRKLFEQFGPVVEVNLPLDKLTRKIKGFGTV 412
>gi|434405771|ref|YP_007148656.1| RRM domain-containing RNA-binding protein [Cylindrospermum
stagnale PCC 7417]
gi|428260026|gb|AFZ25976.1| RRM domain-containing RNA-binding protein [Cylindrospermum
stagnale PCC 7417]
Length = 103
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+S+ V NL+Y+ T +DL+ F+ G V + +P DR T RGFAFV
Sbjct: 1 MSIYVGNLSYQVTEEDLKLAFKEYGTVNRVQLPTDRETGRPRGFAFV 47
>gi|399758|gb|AAB27595.1| FBRNP [Homo sapiens]
Length = 269
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 31/57 (54%)
Query: 4 GRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
G P E + L + L++ TT D LR FE+ G + D + RD T+ SRGF FV
Sbjct: 25 GHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCLVMRDPQTKRSRGFGFV 81
>gi|321476905|gb|EFX87864.1| hypothetical protein DAPPUDRAFT_230293 [Daphnia pulex]
Length = 293
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
M+ GR R + +++V NL+ DL+ +F R GE+ I++ +D+ T +SRGFAFV
Sbjct: 201 MAMGR---RTDEGCTVRVTNLSENARDSDLQELFGRIGEISRIFLSKDKNTGQSRGFAFV 257
>gi|291401097|ref|XP_002716928.1| PREDICTED: mCG1035404-like isoform 2 [Oryctolagus cuniculus]
Length = 355
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 23/57 (40%), Positives = 31/57 (54%)
Query: 4 GRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
G P E + L + L++ TT D LR FE+ G + D + RD T+ SRGF FV
Sbjct: 3 GHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFV 59
>gi|12845960|dbj|BAB26973.1| unnamed protein product [Mus musculus]
Length = 139
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 31/57 (54%)
Query: 4 GRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
G P E + L + L++ TT D LR FE+ G + D + RD T+ SRGF FV
Sbjct: 3 GHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFV 59
>gi|172035063|ref|YP_001801564.1| RNA-binding protein [Cyanothece sp. ATCC 51142]
gi|354551929|ref|ZP_08971237.1| RNP-1 like RNA-binding protein [Cyanothece sp. ATCC 51472]
gi|171696517|gb|ACB49498.1| RNA-binding protein [Cyanothece sp. ATCC 51142]
gi|353555251|gb|EHC24639.1| RNP-1 like RNA-binding protein [Cyanothece sp. ATCC 51472]
Length = 81
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 27/47 (57%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+S+ V NL Y T DL VF G V I+IP DR T RGFAFV
Sbjct: 1 MSIYVGNLAYEVTDADLNTVFSDYGSVKRIHIPTDRETGRPRGFAFV 47
>gi|428301078|ref|YP_007139384.1| RNP-1 like RNA-binding protein [Calothrix sp. PCC 6303]
gi|428237622|gb|AFZ03412.1| RNP-1 like RNA-binding protein [Calothrix sp. PCC 6303]
Length = 105
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 29/47 (61%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+S+ V NL+Y +DL+RVF G V + +P DR T RGFAFV
Sbjct: 1 MSIYVGNLSYEVEEEDLKRVFAEYGNVKRVQMPVDRETGRPRGFAFV 47
>gi|395849978|ref|XP_003797581.1| PREDICTED: serine/arginine-rich splicing factor 12 [Otolemur
garnettii]
Length = 366
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 21/38 (55%), Positives = 27/38 (71%)
Query: 24 RTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
R P+DLRR F R G + D+YIP D +TR RGFA+V+
Sbjct: 117 RARPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQ 154
>gi|350407885|ref|XP_003488228.1| PREDICTED: probable RNA-binding protein 19-like [Bombus impatiens]
Length = 900
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 16/43 (37%), Positives = 30/43 (69%)
Query: 18 VDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+ NL+Y T D++R++FE+ G + ++ +P DR TR+ +GF +
Sbjct: 362 IRNLSYTITEDNIRQLFEKYGPISEVNLPIDRTTRKPKGFGTI 404
>gi|291190584|ref|NP_001167385.1| 35 kDa SR repressor protein [Salmo salar]
gi|223648894|gb|ACN11205.1| 35 kDa SR repressor protein [Salmo salar]
Length = 115
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 36/59 (61%), Gaps = 5/59 (8%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
Y RPP SL + N++ + P++LRR F R G + D+YIP D TR RGFA+++
Sbjct: 4 YMRPPNP-----SLFIRNISDESRPEELRREFGRYGPIVDVYIPLDFSTRRPRGFAYIQ 57
>gi|414883567|tpg|DAA59581.1| TPA: hypothetical protein ZEAMMB73_267259 [Zea mays]
Length = 385
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 30/54 (55%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
PPR + L V NL Y T ++L +VF G V D I D+ T SRGFAFV
Sbjct: 105 PPRGDDPGRLFVGNLPYTYTSEELAQVFSEAGRVDDAQIIYDKVTNRSRGFAFV 158
>gi|425444903|ref|ZP_18824944.1| putative RNA-binding protein rbpA [Microcystis aeruginosa PCC
9443]
gi|389735244|emb|CCI01217.1| putative RNA-binding protein rbpA [Microcystis aeruginosa PCC
9443]
Length = 97
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 31/47 (65%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+S+ V NL+Y + +DL VF G+V ++IP D+ T+ RGFAFV
Sbjct: 1 MSIFVGNLSYDISQEDLVEVFAEYGKVKRVHIPVDKETQRKRGFAFV 47
>gi|409044525|gb|EKM54006.1| hypothetical protein PHACADRAFT_257571 [Phanerochaete carnosa
HHB-10118-sp]
Length = 155
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 27/43 (62%)
Query: 18 VDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
V NL++ TT D LR F + G++ D + RDR T SRGF FV
Sbjct: 7 VGNLSWNTTDDSLRTAFSQFGQILDSIVMRDRDTGRSRGFGFV 49
>gi|374586124|ref|ZP_09659216.1| RNP-1 like RNA-binding protein [Leptonema illini DSM 21528]
gi|373874985|gb|EHQ06979.1| RNP-1 like RNA-binding protein [Leptonema illini DSM 21528]
Length = 102
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+++ V NL +R + D+L+ +F G V + IP DR T SRGFAFV
Sbjct: 1 MNIYVGNLPFRASSDELQNIFAAHGTVARVTIPVDRETGRSRGFAFV 47
>gi|307719265|ref|YP_003874797.1| RNA-binding region RNP-1 [Spirochaeta thermophila DSM 6192]
gi|386347364|ref|YP_006045613.1| RNP-1 like RNA-binding protein [Spirochaeta thermophila DSM 6578]
gi|306532990|gb|ADN02524.1| RNA-binding region RNP-1 [Spirochaeta thermophila DSM 6192]
gi|339412331|gb|AEJ61896.1| RNP-1 like RNA-binding protein [Spirochaeta thermophila DSM 6578]
Length = 101
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 28/41 (68%)
Query: 20 NLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
NL Y+TT D LR++FE+ GEV + I DR + S+GF FV
Sbjct: 9 NLNYQTTEDTLRQLFEQYGEVESVKIITDRDSGFSKGFGFV 49
>gi|292490317|ref|YP_003525756.1| RNP-1 like RNA-binding protein [Nitrosococcus halophilus Nc4]
gi|291578912|gb|ADE13369.1| RNP-1 like RNA-binding protein [Nitrosococcus halophilus Nc4]
Length = 97
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 30/47 (63%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+++ V NL+Y+ T ++LR FE GEV + D+F+ S+GF FV
Sbjct: 1 MNIYVGNLSYQVTDEELRAAFENYGEVSSAKVIVDKFSNRSKGFGFV 47
>gi|256048769|ref|XP_002569484.1| hypothetical protein [Schistosoma mansoni]
gi|350646523|emb|CCD58833.1| hypothetical protein Smp_192360 [Schistosoma mansoni]
Length = 168
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 31/46 (67%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+++V NL TT D+L+ VF G V IY +D+ T+++RGFAF+
Sbjct: 92 TVRVTNLPPDTTADELKSVFSAFGHVMRIYPAKDKLTQQNRGFAFI 137
>gi|298490358|ref|YP_003720535.1| RNP-1 like RNA-binding protein ['Nostoc azollae' 0708]
gi|298232276|gb|ADI63412.1| RNP-1 like RNA-binding protein ['Nostoc azollae' 0708]
Length = 111
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 28/47 (59%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+S+ V NL+Y T D L +VF G V + IP DR T RGFAFV
Sbjct: 1 MSVYVGNLSYEVTQDALTQVFAEYGSVKRVQIPTDRETGRVRGFAFV 47
>gi|351710775|gb|EHB13694.1| Zinc finger CCHC-type and RNA-binding motif-containing protein 1
[Heterocephalus glaber]
Length = 207
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MS G P + ++ V NL + T +DL R+F +C +V + I +D+ TR S+G AF+
Sbjct: 1 MSGGLAPSK----STVYVSNLPFSVTNNDLYRIFSKCSKVVKVTIVKDKDTRRSKGVAFI 56
>gi|219118652|ref|XP_002180094.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217408351|gb|EEC48285.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 106
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
VSL + N+ DL F R GEV D+YIPRD +++ +GFAF+
Sbjct: 18 VSLLIRNVAPDIQSQDLLTAFGRIGEVRDVYIPRDFHSQQPKGFAFI 64
>gi|423277174|ref|ZP_17256088.1| hypothetical protein HMPREF1203_00305 [Bacteroides fragilis HMW
610]
gi|404587650|gb|EKA92189.1| hypothetical protein HMPREF1203_00305 [Bacteroides fragilis HMW
610]
Length = 81
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 29/47 (61%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+++ + NL+Y DLR+V E G V + + DR TR S+GFAFV
Sbjct: 1 MNMYIGNLSYNVKESDLRQVMEEYGTVESVKLITDRETRRSKGFAFV 47
>gi|392570008|gb|EIW63181.1| RNA-binding domain-containing protein [Trametes versicolor
FP-101664 SS1]
Length = 126
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 26/43 (60%)
Query: 18 VDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
V NL++ TT D LR F G++ D + RDR T SRGF FV
Sbjct: 7 VGNLSWNTTDDSLRSAFSNYGQILDSIVMRDRDTGRSRGFGFV 49
>gi|345870843|ref|ZP_08822793.1| RNP-1 like RNA-binding protein [Thiorhodococcus drewsii AZ1]
gi|343921312|gb|EGV32033.1| RNP-1 like RNA-binding protein [Thiorhodococcus drewsii AZ1]
Length = 90
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 27/47 (57%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+++ V NL Y T +DLR F GE+ + D+FT S+GF FV
Sbjct: 1 MNIYVGNLAYSVTEEDLRAAFSTYGEISSASLITDKFTGNSKGFGFV 47
>gi|195574505|ref|XP_002105229.1| GD21374 [Drosophila simulans]
gi|194201156|gb|EDX14732.1| GD21374 [Drosophila simulans]
Length = 2951
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 31/50 (62%)
Query: 11 EGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
E M L + L YRTT ++L+ FE+ G + D+ + +D T+ SRGF F+
Sbjct: 2614 EHMRKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFI 2663
>gi|425434353|ref|ZP_18814822.1| putative RNA-binding protein rbpA [Microcystis aeruginosa PCC
9432]
gi|425450092|ref|ZP_18829924.1| putative RNA-binding protein rbpA [Microcystis aeruginosa PCC
7941]
gi|389676152|emb|CCH94759.1| putative RNA-binding protein rbpA [Microcystis aeruginosa PCC
9432]
gi|389769241|emb|CCI05872.1| putative RNA-binding protein rbpA [Microcystis aeruginosa PCC
7941]
Length = 100
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+++ V NL Y T +DL+ VF G V +Y+P DR T + RGF FV
Sbjct: 1 MTIYVGNLVYDVTTNDLQEVFAEYGTVSRVYLPVDRETGKMRGFGFV 47
>gi|186681280|ref|YP_001864476.1| RNP-1 like RNA-binding protein [Nostoc punctiforme PCC 73102]
gi|186463732|gb|ACC79533.1| RNP-1 like RNA-binding protein [Nostoc punctiforme PCC 73102]
Length = 100
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 28/48 (58%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
+S+ V NL+Y +DLR VF G V ++ +P DR T RGF FV
Sbjct: 1 MSIYVGNLSYEVKEEDLRHVFAEYGTVKNVQLPIDRETGRMRGFGFVE 48
>gi|425444904|ref|ZP_18824945.1| putative RNA-binding protein rbpA [Microcystis aeruginosa PCC
9443]
gi|389735245|emb|CCI01218.1| putative RNA-binding protein rbpA [Microcystis aeruginosa PCC
9443]
Length = 97
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 31/47 (65%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+S+ V NL+Y + +DL VF G+V ++IP D+ T+ RGFAFV
Sbjct: 1 MSIFVGNLSYEISQEDLVDVFAEYGKVKRVHIPLDKDTQRKRGFAFV 47
>gi|448878427|gb|AGE46176.1| arginine/serine-rich splicing factor SCL42 transcript I
[Physcomitrella patens subsp. patens]
Length = 370
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 31/47 (65%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
SL V N+ + +DLR FER G V D+Y+PRD +T + RGF FV+
Sbjct: 43 SLLVRNIPRDCSAEDLRIPFERYGVVKDVYLPRDYYTGQPRGFGFVQ 89
>gi|444725879|gb|ELW66430.1| Heterogeneous nuclear ribonucleoprotein A1 [Tupaia chinensis]
Length = 191
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 31/55 (56%)
Query: 6 PPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
P +E + L + L++ TT + LR FE+ G + D + RD T+ SRGF FV
Sbjct: 14 SPKELEQLWKLFIRGLSFETTDESLRSHFEQWGTLTDCMVMRDPNTKHSRGFGFV 68
>gi|68063653|ref|XP_673822.1| Ser/Arg-rich splicing factor [Plasmodium berghei strain ANKA]
gi|56491949|emb|CAH95915.1| Ser/Arg-rich splicing factor, putative [Plasmodium berghei]
Length = 297
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 34/56 (60%), Gaps = 5/56 (8%)
Query: 5 RPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
RP P +SL + L + T+P +R F++ G + D+Y+P D +T+E RGF FV
Sbjct: 8 RPQP-----MSLLIRKLKFNTSPSMVRDKFKKFGAIKDVYLPIDYYTKEPRGFGFV 58
>gi|384247695|gb|EIE21181.1| RNA-binding domain-containing protein [Coccomyxa subellipsoidea
C-169]
Length = 184
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 30/46 (65%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
SL V NL+ T DDLR V E+ G + D+YIP+D ++ E RG F+
Sbjct: 15 SLLVRNLSRSVTLDDLRYVAEKYGRLRDVYIPKDYYSGEPRGIGFL 60
>gi|195326391|ref|XP_002029912.1| GM25167 [Drosophila sechellia]
gi|194118855|gb|EDW40898.1| GM25167 [Drosophila sechellia]
Length = 917
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 19/41 (46%), Positives = 29/41 (70%)
Query: 20 NLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
NL Y TT +DLR++FE+ G V ++ +P D+ TR+ +GF V
Sbjct: 370 NLAYTTTEEDLRKLFEQFGPVVEVNLPLDKLTRKIKGFGTV 410
>gi|423196273|ref|ZP_17182856.1| hypothetical protein HMPREF1171_00888 [Aeromonas hydrophila SSU]
gi|404632497|gb|EKB29102.1| hypothetical protein HMPREF1171_00888 [Aeromonas hydrophila SSU]
Length = 92
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 31/47 (65%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+ + V NL+YR T D+L+ VF + G+V + I DR T +S+GF F+
Sbjct: 1 MKIYVGNLSYRMTADELKTVFSQFGQVDKVDIIIDRDTGQSKGFGFI 47
>gi|255935633|ref|XP_002558843.1| Pc13g04070 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211583463|emb|CAP91476.1| Pc13g04070 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 178
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 33/56 (58%)
Query: 5 RPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+P +++ +L V NL++ TT + + +F +CGE+ + + DRF + GF FV
Sbjct: 41 KPDEKLKNATTLYVGNLSFYTTEEQIHELFAKCGEIKRLVMGLDRFNKTPCGFCFV 96
>gi|226497258|ref|NP_001140274.1| uncharacterized protein LOC100272318 [Zea mays]
gi|194698792|gb|ACF83480.1| unknown [Zea mays]
gi|414883568|tpg|DAA59582.1| TPA: ribonucleoprotein [Zea mays]
Length = 341
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 30/54 (55%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
PPR + L V NL Y T ++L +VF G V D I D+ T SRGFAFV
Sbjct: 105 PPRGDDPGRLFVGNLPYTYTSEELAQVFSEAGRVDDAQIIYDKVTNRSRGFAFV 158
>gi|428214973|ref|YP_007088117.1| RRM domain-containing RNA-binding protein [Oscillatoria acuminata
PCC 6304]
gi|428003354|gb|AFY84197.1| RRM domain-containing RNA-binding protein [Oscillatoria acuminata
PCC 6304]
Length = 106
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 28/47 (59%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+S+ V NL+Y T +DL VF G V + +P DR T RGFAFV
Sbjct: 1 MSIYVGNLSYEVTQEDLNAVFAEYGSVKRVNLPTDRETGRVRGFAFV 47
>gi|390464603|ref|XP_003733247.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein
A1-like 3-like, partial [Callithrix jacchus]
Length = 288
Score = 43.9 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 32/60 (53%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MS P E + L + L++ TT + LR FE+ G + D + RD T+ SRGF FV
Sbjct: 1 MSKSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFV 60
>gi|195611722|gb|ACG27691.1| ribonucleoprotein [Zea mays]
Length = 341
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 30/54 (55%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
PPR + L V NL Y T ++L +VF G V D I D+ T SRGFAFV
Sbjct: 105 PPRGDDPGRLFVGNLPYTYTSEELAQVFSEAGRVDDAQIIYDKVTNRSRGFAFV 158
>gi|281427346|ref|NP_001163962.1| RNA binding motif protein 19 [Xenopus (Silurana) tropicalis]
gi|189442184|gb|AAI67335.1| Unknown (protein for MGC:135501) [Xenopus (Silurana) tropicalis]
Length = 542
Score = 43.9 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 19/45 (42%), Positives = 28/45 (62%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
L V NL Y DDL ++F + G + +I+ P D T++ +GFAFV
Sbjct: 388 LFVRNLPYTCNEDDLEKLFSKYGPISEIHFPIDSLTKKPKGFAFV 432
>gi|148695242|gb|EDL27189.1| mCG1305, isoform CRA_c [Mus musculus]
Length = 144
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 31/57 (54%)
Query: 4 GRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
G P E + L + L++ TT D LR FE+ G + D + RD T+ SRGF FV
Sbjct: 3 GHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFV 59
>gi|443328242|ref|ZP_21056842.1| RRM domain-containing RNA-binding protein [Xenococcus sp. PCC
7305]
gi|442792088|gb|ELS01575.1| RRM domain-containing RNA-binding protein [Xenococcus sp. PCC
7305]
Length = 92
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 27/47 (57%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+S+ V NL Y +DL VF G V ++IP DR T RGFAFV
Sbjct: 1 MSIYVGNLAYEINQEDLNEVFAEYGTVKRVHIPTDRETGRVRGFAFV 47
>gi|411118097|ref|ZP_11390478.1| RRM domain-containing RNA-binding protein [Oscillatoriales
cyanobacterium JSC-12]
gi|410711821|gb|EKQ69327.1| RRM domain-containing RNA-binding protein [Oscillatoriales
cyanobacterium JSC-12]
Length = 100
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 28/47 (59%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+S+ V NL+Y T DDL + F G V + +P DR T RGFAFV
Sbjct: 1 MSIYVGNLSYNVTSDDLTQTFAEYGTVKRVQLPTDRETGRLRGFAFV 47
>gi|294941928|ref|XP_002783310.1| DAZ-associated protein, putative [Perkinsus marinus ATCC 50983]
gi|239895725|gb|EER15106.1| DAZ-associated protein, putative [Perkinsus marinus ATCC 50983]
Length = 429
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 28/48 (58%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
V L V L DLR VFE G V D++I RDR T +SRG AFVR
Sbjct: 14 VKLFVRGLPVHYPESDLRAVFEEYGMVEDVFILRDRSTMQSRGMAFVR 61
>gi|365122662|ref|ZP_09339562.1| hypothetical protein HMPREF1033_02908 [Tannerella sp.
6_1_58FAA_CT1]
gi|363642168|gb|EHL81535.1| hypothetical protein HMPREF1033_02908 [Tannerella sp.
6_1_58FAA_CT1]
Length = 81
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 30/47 (63%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+++ + NL YR DL++V E G V + I +DR T +S+GFAF+
Sbjct: 1 MNIYIGNLNYRVKEADLQQVIEEYGAVESVKIIKDRETGKSKGFAFI 47
>gi|440586615|emb|CCK33029.1| RRM domain protein Musashi [Platynereis dumerilii]
Length = 205
Score = 43.9 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 19/43 (44%), Positives = 28/43 (65%)
Query: 18 VDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
V L+++TTP+ LR F + GE+ + + RD T+ SRGF FV
Sbjct: 27 VGGLSWQTTPEGLREYFTKYGEIKECMVMRDPITKRSRGFGFV 69
>gi|434398305|ref|YP_007132309.1| RNP-1 like RNA-binding protein [Stanieria cyanosphaera PCC 7437]
gi|428269402|gb|AFZ35343.1| RNP-1 like RNA-binding protein [Stanieria cyanosphaera PCC 7437]
Length = 96
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 27/47 (57%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+S+ V NL Y P+DL VF G V ++ P DR T RGFAFV
Sbjct: 1 MSIYVGNLDYEIGPEDLTEVFAEYGSVKRVHFPTDRETGRKRGFAFV 47
>gi|428312632|ref|YP_007123609.1| RRM domain-containing RNA-binding protein [Microcoleus sp. PCC
7113]
gi|428254244|gb|AFZ20203.1| RRM domain-containing RNA-binding protein [Microcoleus sp. PCC
7113]
Length = 99
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 28/47 (59%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+S+ V NL+Y+ T DDL VF G V + +P DR T RGF FV
Sbjct: 1 MSIYVGNLSYQVTQDDLNAVFAEYGTVKRVQLPTDRETGRIRGFGFV 47
>gi|53713457|ref|YP_099449.1| RNA-binding protein [Bacteroides fragilis YCH46]
gi|60681704|ref|YP_211848.1| RNA-binding protein [Bacteroides fragilis NCTC 9343]
gi|265763724|ref|ZP_06092292.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
gi|336409821|ref|ZP_08590303.1| hypothetical protein HMPREF1018_02319 [Bacteroides sp. 2_1_56FAA]
gi|375358566|ref|YP_005111338.1| putative RNA-binding protein [Bacteroides fragilis 638R]
gi|383118431|ref|ZP_09939173.1| hypothetical protein BSHG_2420 [Bacteroides sp. 3_2_5]
gi|423250066|ref|ZP_17231082.1| hypothetical protein HMPREF1066_02092 [Bacteroides fragilis
CL03T00C08]
gi|423255566|ref|ZP_17236495.1| hypothetical protein HMPREF1067_03139 [Bacteroides fragilis
CL03T12C07]
gi|423257451|ref|ZP_17238374.1| hypothetical protein HMPREF1055_00651 [Bacteroides fragilis
CL07T00C01]
gi|423265582|ref|ZP_17244585.1| hypothetical protein HMPREF1056_02272 [Bacteroides fragilis
CL07T12C05]
gi|423271427|ref|ZP_17250397.1| hypothetical protein HMPREF1079_03479 [Bacteroides fragilis
CL05T00C42]
gi|423275668|ref|ZP_17254612.1| hypothetical protein HMPREF1080_03265 [Bacteroides fragilis
CL05T12C13]
gi|423285731|ref|ZP_17264612.1| hypothetical protein HMPREF1204_04150 [Bacteroides fragilis HMW
615]
gi|52216322|dbj|BAD48915.1| putative RNA-binding protein [Bacteroides fragilis YCH46]
gi|60493138|emb|CAH07919.1| putative RNA-binding protein [Bacteroides fragilis NCTC 9343]
gi|251945724|gb|EES86131.1| hypothetical protein BSHG_2420 [Bacteroides sp. 3_2_5]
gi|263256332|gb|EEZ27678.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
gi|301163247|emb|CBW22797.1| putative RNA-binding protein [Bacteroides fragilis 638R]
gi|335946202|gb|EGN08008.1| hypothetical protein HMPREF1018_02319 [Bacteroides sp. 2_1_56FAA]
gi|387777819|gb|EIK39915.1| hypothetical protein HMPREF1055_00651 [Bacteroides fragilis
CL07T00C01]
gi|392651211|gb|EIY44876.1| hypothetical protein HMPREF1067_03139 [Bacteroides fragilis
CL03T12C07]
gi|392654128|gb|EIY47777.1| hypothetical protein HMPREF1066_02092 [Bacteroides fragilis
CL03T00C08]
gi|392697123|gb|EIY90309.1| hypothetical protein HMPREF1079_03479 [Bacteroides fragilis
CL05T00C42]
gi|392701335|gb|EIY94494.1| hypothetical protein HMPREF1080_03265 [Bacteroides fragilis
CL05T12C13]
gi|392703240|gb|EIY96384.1| hypothetical protein HMPREF1056_02272 [Bacteroides fragilis
CL07T12C05]
gi|404578782|gb|EKA83501.1| hypothetical protein HMPREF1204_04150 [Bacteroides fragilis HMW
615]
Length = 81
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+++ V NL+Y DLR+V E G V + + DR TR S+GFAFV
Sbjct: 1 MNMYVGNLSYNVKESDLRQVMEEYGVVESVKLITDRETRRSKGFAFV 47
>gi|321474302|gb|EFX85267.1| hypothetical protein DAPPUDRAFT_98779 [Daphnia pulex]
Length = 283
Score = 43.9 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 31/46 (67%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+L + NL+Y TT +D+ R F +CG + ++ IP ++ T + RGF ++
Sbjct: 161 TLFIGNLSYDTTKEDILRHFAKCGPIKNVRIPLEKETNQPRGFGYI 206
>gi|193688245|ref|XP_001946219.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1, A2/B1
homolog [Acyrthosiphon pisum]
Length = 350
Score = 43.9 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 11 EGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
E + L V L Y+TT ++L++ FE+ GE+ D+ + +D T+ SRGF F+
Sbjct: 5 EHLRKLFVGGLDYKTTDENLKKYFEQWGEIMDVVVMKDPQTKRSRGFGFI 54
>gi|301120270|ref|XP_002907862.1| eukaryotic translation initiation factor 3 subunit G, putative
[Phytophthora infestans T30-4]
gi|262102893|gb|EEY60945.1| eukaryotic translation initiation factor 3 subunit G, putative
[Phytophthora infestans T30-4]
Length = 325
Score = 43.9 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 21/46 (45%), Positives = 31/46 (67%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+L+V N++ T DDL+ +F G V +Y+ +DR T +SRGFAFV
Sbjct: 214 TLRVTNVSPDTREDDLKELFRAFGPVARVYLAKDRETFQSRGFAFV 259
>gi|294886537|ref|XP_002771747.1| DAZ-associated protein, putative [Perkinsus marinus ATCC 50983]
gi|239875509|gb|EER03563.1| DAZ-associated protein, putative [Perkinsus marinus ATCC 50983]
Length = 422
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 28/48 (58%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
V L V L DLR VFE G V D++I RDR T +SRG AFVR
Sbjct: 14 VKLFVRGLPVHYPESDLRAVFEEYGMVEDVFILRDRSTMQSRGMAFVR 61
>gi|156549026|ref|XP_001607355.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1, A2/B1
homolog [Nasonia vitripennis]
Length = 371
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 32/50 (64%)
Query: 11 EGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
E + L + L YRTT D L++ FE+ G++ D+ + +D T+ SRGF F+
Sbjct: 14 EHVRKLFIGGLDYRTTDDSLKKHFEQWGDIVDVVVMKDPKTKRSRGFGFI 63
>gi|195589101|ref|XP_002084294.1| GD14198 [Drosophila simulans]
gi|194196303|gb|EDX09879.1| GD14198 [Drosophila simulans]
Length = 778
Score = 43.5 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 19/41 (46%), Positives = 29/41 (70%)
Query: 20 NLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
NL Y TT +DLR++FE+ G V ++ +P D+ TR+ +GF V
Sbjct: 230 NLAYTTTEEDLRKLFEQFGPVVEVNLPLDKLTRKIKGFGTV 270
>gi|270009354|gb|EFA05802.1| hypothetical protein TcasGA2_TC030646 [Tribolium castaneum]
Length = 212
Score = 43.5 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 23/61 (37%), Positives = 32/61 (52%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+SY RPP +L + NL T DD+ R+F GE+ + +D+ T RG AFV
Sbjct: 100 VSYSRPPGADMKASNLYITNLPKDVTEDDVHRLFSNYGEIIQKSVLKDKITGMPRGVAFV 159
Query: 61 R 61
R
Sbjct: 160 R 160
>gi|237840719|ref|XP_002369657.1| hypothetical protein TGME49_008970 [Toxoplasma gondii ME49]
gi|211967321|gb|EEB02517.1| hypothetical protein TGME49_008970 [Toxoplasma gondii ME49]
gi|221482873|gb|EEE21204.1| serine/arginine rich splicing factor, putative [Toxoplasma gondii
GT1]
gi|221503334|gb|EEE29032.1| polyadenylate-binding protein, putative [Toxoplasma gondii VEG]
Length = 309
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 25/36 (69%)
Query: 25 TTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
T DDLR+ F RC +V D+YIP T++ RGFAF+
Sbjct: 131 ATQDDLRKFFGRCSDVKDVYIPLHYKTKQPRGFAFI 166
>gi|158335765|ref|YP_001516937.1| RNA-binding protein [Acaryochloris marina MBIC11017]
gi|359461305|ref|ZP_09249868.1| RNA-binding protein [Acaryochloris sp. CCMEE 5410]
gi|158306006|gb|ABW27623.1| RNA-binding protein [Acaryochloris marina MBIC11017]
Length = 95
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+++ + NL+Y T DDL VF GEV + +P DR + RGF FV
Sbjct: 1 MTVYIGNLSYEVTEDDLSAVFAEYGEVKQVKLPVDRESGRKRGFGFV 47
>gi|224010036|ref|XP_002293976.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220970648|gb|EED88985.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 176
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 29/43 (67%)
Query: 18 VDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
V L+++TT + LR FE+ GEV + + RDR T + RGFAFV
Sbjct: 29 VGGLSWQTTEETLRYHFEQYGEVSSVEVMRDRNTGDPRGFAFV 71
>gi|428772696|ref|YP_007164484.1| RNP-1 like RNA-binding protein [Cyanobacterium stanieri PCC 7202]
gi|428686975|gb|AFZ46835.1| RNP-1 like RNA-binding protein [Cyanobacterium stanieri PCC 7202]
Length = 98
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+S+ V NL+Y + +DL VF G V ++IP DR + RGFAFV
Sbjct: 1 MSIYVGNLSYSVSKNDLNEVFAEYGTVKRVHIPTDRESGRMRGFAFV 47
>gi|375144998|ref|YP_005007439.1| RNP-1 like RNA-binding protein [Niastella koreensis GR20-10]
gi|361059044|gb|AEV98035.1| RNP-1 like RNA-binding protein [Niastella koreensis GR20-10]
Length = 82
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 29/47 (61%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+++ V NL++ DDLR+ F GEV + + D+ T SRGFAF+
Sbjct: 1 MNIYVSNLSFSVQNDDLRKHFSEYGEVDSVNVIIDKVTNRSRGFAFI 47
>gi|336371226|gb|EGN99565.1| hypothetical protein SERLA73DRAFT_159820 [Serpula lacrymans var.
lacrymans S7.3]
Length = 127
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 26/43 (60%)
Query: 18 VDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
V NL++ TT D LR F G+V D + RDR T SRGF FV
Sbjct: 7 VGNLSWSTTDDTLREAFSEYGQVVDSIVMRDRETGRSRGFGFV 49
>gi|254414476|ref|ZP_05028242.1| RNA-binding protein, putative [Coleofasciculus chthonoplastes PCC
7420]
gi|196178706|gb|EDX73704.1| RNA-binding protein, putative [Coleofasciculus chthonoplastes PCC
7420]
Length = 96
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+++ + NL+Y+ T DDL+ VF G V + +P DR T RGFAFV
Sbjct: 1 MTIYIGNLSYQATEDDLQTVFADYGTVKRVVLPTDRETGRVRGFAFV 47
>gi|193678935|ref|XP_001949378.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1-like [Acyrthosiphon pisum]
Length = 226
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 19/46 (41%), Positives = 32/46 (69%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
++ V NL + T +DL +VFE+ G++ + I +D+ TR+S+G AFV
Sbjct: 10 TVYVSNLPFNLTNNDLHKVFEKYGKLVKVTIVKDKTTRQSKGVAFV 55
>gi|116782736|gb|ABK22635.1| unknown [Picea sitchensis]
Length = 275
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 31/51 (60%)
Query: 11 EGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
E SL V N+ D+LR FER G + D+Y+P+D +T E RGF FV+
Sbjct: 33 EPNTSLLVRNIPRDCRSDELRMPFERFGPLKDVYLPKDFYTGEPRGFGFVQ 83
>gi|432098521|gb|ELK28236.1| Heterogeneous nuclear ribonucleoprotein A1 [Myotis davidii]
Length = 316
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 32/60 (53%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MS P E + L + L++ TT + LR FE+ G + D + RD T+ SRGF FV
Sbjct: 1 MSKSESPKESEQLRKLFIGGLSFETTNESLRSHFEQWGTLTDYVVLRDPNTKRSRGFGFV 60
>gi|428313300|ref|YP_007124277.1| RRM domain-containing RNA-binding protein [Microcoleus sp. PCC
7113]
gi|428254912|gb|AFZ20871.1| RRM domain-containing RNA-binding protein [Microcoleus sp. PCC
7113]
Length = 97
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 30/47 (63%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+++ V NL+Y+ T +DLR VF G V + +P DR T RGFAFV
Sbjct: 1 MTIYVGNLSYQATEEDLRTVFADYGTVKRVVLPTDRETGRMRGFAFV 47
>gi|24661759|ref|NP_648337.1| CG3335 [Drosophila melanogaster]
gi|7294907|gb|AAF50237.1| CG3335 [Drosophila melanogaster]
Length = 918
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 19/41 (46%), Positives = 29/41 (70%)
Query: 20 NLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
NL Y TT +DLR++FE+ G V ++ +P D+ TR+ +GF V
Sbjct: 370 NLAYTTTEEDLRKLFEQFGPVVEVNLPLDKLTRKIKGFGTV 410
>gi|340721943|ref|XP_003399372.1| PREDICTED: probable RNA-binding protein 19-like [Bombus terrestris]
Length = 901
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 30/43 (69%)
Query: 18 VDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+ NL+Y T D++R++FE+ G + ++ +P DR TR+ +GF V
Sbjct: 363 IRNLSYTITEDNIRQLFEKYGPLSEVNLPIDRTTRKPKGFGTV 405
>gi|126660986|ref|ZP_01732073.1| RNA-binding region RNP-1 [Cyanothece sp. CCY0110]
gi|126617726|gb|EAZ88508.1| RNA-binding region RNP-1 [Cyanothece sp. CCY0110]
Length = 81
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 27/47 (57%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+S+ V NL Y T DL VF G V ++IP DR T RGFAFV
Sbjct: 1 MSIYVGNLAYEVTDADLNTVFSDYGSVKRVHIPTDRETGRPRGFAFV 47
>gi|21064855|gb|AAM29657.1| SD14970p [Drosophila melanogaster]
Length = 918
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 19/41 (46%), Positives = 29/41 (70%)
Query: 20 NLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
NL Y TT +DLR++FE+ G V ++ +P D+ TR+ +GF V
Sbjct: 370 NLAYTTTEEDLRKLFEQFGPVVEVNLPLDKLTRKIKGFGTV 410
>gi|219128595|ref|XP_002184494.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217403944|gb|EEC43893.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 84
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 35/52 (67%)
Query: 9 RIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
R + + +++V NL+ T+ DL+ +F+R G + +Y+ +D+ T SRGFAFV
Sbjct: 1 RRDDLNTIRVTNLSENTSEMDLQDLFQRFGRISRVYLAKDKETFRSRGFAFV 52
>gi|189521749|ref|XP_001923043.1| PREDICTED: polyadenylate-binding protein 2-B-like isoform 1 [Danio
rerio]
Length = 192
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
S+ V N+ Y T D+L F CG V + IP +RFT +GFA++
Sbjct: 67 SIYVGNVDYGATADELEMYFNSCGHVNRVTIPYNRFTGHPKGFAYI 112
>gi|32264414|gb|AAP78702.1| hnRNP core protein A1, partial [Equus caballus]
Length = 61
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 32/60 (53%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MS P E + L + L++ TT + LR FE+ G + D + RD T+ SRGF FV
Sbjct: 1 MSKSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFV 60
>gi|357123012|ref|XP_003563207.1| PREDICTED: transformer-2 sex-determining protein-like [Brachypodium
distachyon]
Length = 241
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 31/46 (67%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+L V L+ RT+ DDL + F + G+V D ++ D T+ESRGFAFV
Sbjct: 111 NLYVTGLSTRTSGDDLEKFFSKEGKVKDCHVVMDPRTKESRGFAFV 156
>gi|392593257|gb|EIW82582.1| RNA-binding domain-containing protein [Coniophora puteana
RWD-64-598 SS2]
Length = 136
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 26/45 (57%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
L V NL++ T D LR F R G V D + RDR T SRGF FV
Sbjct: 5 LYVGNLSWSTGDDGLRNAFGRYGAVTDSIVMRDRETGRSRGFGFV 49
>gi|354568550|ref|ZP_08987714.1| RNP-1 like RNA-binding protein [Fischerella sp. JSC-11]
gi|353540273|gb|EHC09750.1| RNP-1 like RNA-binding protein [Fischerella sp. JSC-11]
Length = 106
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 29/47 (61%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+S+ V NL+Y+ +DLR VF G V + +P DR T RGFAFV
Sbjct: 1 MSIYVGNLSYQVREEDLREVFAEYGTVKKVQLPTDRDTGRVRGFAFV 47
>gi|212546539|ref|XP_002153423.1| glycine-rich RNA-binding protein, putative [Talaromyces marneffei
ATCC 18224]
gi|210064943|gb|EEA19038.1| glycine-rich RNA-binding protein, putative [Talaromyces marneffei
ATCC 18224]
Length = 135
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%)
Query: 13 MVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
M L + L + TT D LR FE+ G + + + +DR T SRGF FVR
Sbjct: 1 MAKLFIGGLAWHTTDDTLRSGFEKFGTIEEAIVIKDRDTNRSRGFGFVR 49
>gi|334118594|ref|ZP_08492683.1| RNP-1 like RNA-binding protein [Microcoleus vaginatus FGP-2]
gi|333459601|gb|EGK88214.1| RNP-1 like RNA-binding protein [Microcoleus vaginatus FGP-2]
Length = 95
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+++ + NL+YR T +DL VF G V + +P DR T RGFAFV
Sbjct: 1 MTIYIGNLSYRATEEDLTAVFAEYGTVKRVVLPTDRETGRMRGFAFV 47
>gi|149022306|gb|EDL79200.1| rCG27231, isoform CRA_b [Rattus norvegicus]
gi|149022307|gb|EDL79201.1| rCG27231, isoform CRA_b [Rattus norvegicus]
gi|149022308|gb|EDL79202.1| rCG27231, isoform CRA_b [Rattus norvegicus]
gi|149022309|gb|EDL79203.1| rCG27231, isoform CRA_b [Rattus norvegicus]
Length = 144
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 31/57 (54%)
Query: 4 GRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
G P E + L + L++ TT D LR FE+ G + D + RD T+ SRGF FV
Sbjct: 3 GHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFV 59
>gi|393217699|gb|EJD03188.1| RNA-binding domain-containing protein [Fomitiporia mediterranea
MF3/22]
Length = 142
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 27/43 (62%)
Query: 18 VDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
V NL++ TT D LR+ F G+V D + RDR T SRGF FV
Sbjct: 7 VGNLSWNTTDDTLRKAFSDYGQVVDSIVMRDRDTGRSRGFGFV 49
>gi|327263824|ref|XP_003216717.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like
[Anolis carolinensis]
Length = 354
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 32/60 (53%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MS P E + L + L++ TT + LR FE+ G + D + RD T+ SRGF FV
Sbjct: 1 MSKSESPKEPEQLRKLFIGGLSFETTDESLRNHFEQWGTLTDCVVMRDPNTKRSRGFGFV 60
>gi|298490385|ref|YP_003720562.1| RNP-1 like RNA-binding protein ['Nostoc azollae' 0708]
gi|298232303|gb|ADI63439.1| RNP-1 like RNA-binding protein ['Nostoc azollae' 0708]
Length = 99
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 30/47 (63%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+++ V NL+YR T DL+ VF GEV + +P +R T RGFAFV
Sbjct: 1 MTIYVGNLSYRATEADLKAVFADYGEVKRVVLPTERETGRMRGFAFV 47
>gi|428779944|ref|YP_007171730.1| RRM domain-containing RNA-binding protein [Dactylococcopsis
salina PCC 8305]
gi|428694223|gb|AFZ50373.1| RRM domain-containing RNA-binding protein [Dactylococcopsis
salina PCC 8305]
Length = 95
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 27/47 (57%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+S+ V NL Y T DDL VF G V +++P DR T RGF FV
Sbjct: 1 MSIYVGNLDYSVTQDDLSEVFAEYGTVKRVHLPTDRETGRMRGFGFV 47
>gi|434406111|ref|YP_007148996.1| RRM domain-containing RNA-binding protein [Cylindrospermum
stagnale PCC 7417]
gi|428260366|gb|AFZ26316.1| RRM domain-containing RNA-binding protein [Cylindrospermum
stagnale PCC 7417]
Length = 94
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 30/47 (63%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+++ V NL+Y+ T DL+ VF GEV + +P DR T RGFAFV
Sbjct: 1 MTIYVGNLSYQATEADLKSVFADYGEVKRVVLPTDRETGRLRGFAFV 47
>gi|409080475|gb|EKM80835.1| hypothetical protein AGABI1DRAFT_112564 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426197375|gb|EKV47302.1| hypothetical protein AGABI2DRAFT_192533 [Agaricus bisporus var.
bisporus H97]
Length = 168
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 6 PPPRIEGMVSLKVD---NLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
PP R ++S+K NL++ TT + LR+ F G+V D + RDR T SRGF FV
Sbjct: 16 PPEREAKLMSVKNTVYRNLSWNTTDETLRQAFSDFGQVLDSIVMRDRDTGRSRGFGFV 73
>gi|393235405|gb|EJD42960.1| RNA-binding domain-containing protein [Auricularia delicata
TFB-10046 SS5]
Length = 255
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 35/57 (61%), Gaps = 3/57 (5%)
Query: 5 RPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
RPPP + MV V NL + T+P+DL F + GE+ D+ IP + ++RGFA V+
Sbjct: 61 RPPPEPQRMVF--VGNLPWSTSPEDLGMTFRKFGEIVDVRIPTNELG-QTRGFAHVQ 114
>gi|196232841|ref|ZP_03131691.1| RNP-1 like RNA-binding protein [Chthoniobacter flavus Ellin428]
gi|196223040|gb|EDY17560.1| RNP-1 like RNA-binding protein [Chthoniobacter flavus Ellin428]
Length = 107
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 28/45 (62%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
L V NL++ TT DL+ F G V + + +D+FT +SRGF FV
Sbjct: 5 LYVGNLSFDTTEMDLQDTFAEAGTVSEATLMQDKFTGKSRGFGFV 49
>gi|291399268|ref|XP_002716024.1| PREDICTED: FUS interacting protein (serine-arginine rich) 1
[Oryctolagus cuniculus]
Length = 182
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 31/48 (64%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
SL V N+ T +DLRR F R G + D+Y+P D +TR RGFA+V+
Sbjct: 10 TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQ 57
>gi|154279360|ref|XP_001540493.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150412436|gb|EDN07823.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 149
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%)
Query: 13 MVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
M L + L + TT D LR FE+ G + + + +DR T SRGF FVR
Sbjct: 1 MSKLFIGGLAWHTTDDTLRAGFEKYGTIEEAIVVKDRDTNRSRGFGFVR 49
>gi|113475531|ref|YP_721592.1| RNA-binding region RNP-1 [Trichodesmium erythraeum IMS101]
gi|110166579|gb|ABG51119.1| RNA-binding region RNP-1 [Trichodesmium erythraeum IMS101]
Length = 89
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+S+ V NL+Y T +DL+ F + G V + +P DR T RGFAFV
Sbjct: 1 MSVYVGNLSYDATDEDLKTAFAKYGNVKRVQVPNDRETGRPRGFAFV 47
>gi|402864694|ref|XP_003896588.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like [Papio
anubis]
Length = 320
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 32/60 (53%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MS P E + L + L++ TT + LR FE+ G + D + RD T+ SRGF FV
Sbjct: 1 MSKSESPKEPEQLRKLFIGGLSFETTEESLRSHFEQWGTLADCVVMRDPNTKRSRGFGFV 60
>gi|254564595|ref|XP_002489408.1| Splicing factor that reanneals U4 and U6 snRNPs during spliceosome
recycling [Komagataella pastoris GS115]
gi|238029204|emb|CAY67124.1| Splicing factor that reanneals U4 and U6 snRNPs during spliceosome
recycling [Komagataella pastoris GS115]
gi|328349837|emb|CCA36237.1| Squamous cell carcinoma antigen recognized by T-cells 3
[Komagataella pastoris CBS 7435]
Length = 865
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 31/45 (68%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
L + NL ++ T +DL +FE+ G++ IY+P D T+++ GFAF+
Sbjct: 673 LFIRNLDFKLTKEDLVPLFEKYGQIDKIYVPCDSETKKNNGFAFI 717
>gi|225562488|gb|EEH10767.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
gi|325092417|gb|EGC45727.1| conserved hypothetical protein [Ajellomyces capsulatus H88]
Length = 136
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%)
Query: 13 MVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
M L + L + TT D LR FE+ G + + + +DR T SRGF FVR
Sbjct: 1 MSKLFIGGLAWHTTDDTLRAGFEKYGTIEEAIVVKDRDTNRSRGFGFVR 49
>gi|338710589|ref|XP_001915964.2| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 12 [Equus caballus]
Length = 284
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 20/35 (57%), Positives = 26/35 (74%)
Query: 27 PDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
P+DLRR F R G + D+YIP D +TR RGFA+V+
Sbjct: 37 PEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQ 71
>gi|218245224|ref|YP_002370595.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 8801]
gi|257058256|ref|YP_003136144.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 8802]
gi|218165702|gb|ACK64439.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 8801]
gi|256588422|gb|ACU99308.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 8802]
Length = 94
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 27/47 (57%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+S+ V NL Y T DL VF G V +++P DR T RGFAFV
Sbjct: 1 MSIYVGNLAYEVTEADLNSVFGEYGSVKRVHVPMDRDTGRMRGFAFV 47
>gi|114051910|ref|NP_001039420.1| probable RNA-binding protein 19 [Bos taurus]
gi|88954099|gb|AAI14030.1| RNA binding motif protein 19 [Bos taurus]
Length = 920
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
L V NL Y ++ +DL ++F R G V +++ P D T++ +GFAFV
Sbjct: 365 LFVRNLPYTSSEEDLEKLFSRYGPVSELHYPIDSLTKKPKGFAFV 409
>gi|30680096|ref|NP_849605.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|15450753|gb|AAK96648.1| At1g07350/F22G5_25 [Arabidopsis thaliana]
gi|332189992|gb|AEE28113.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 129
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
SL V L++R T DL F + G+V D+++ D +TRESRGF F+
Sbjct: 46 SLYVTGLSHRVTERDLEDHFAKEGKVTDVHLVLDPWTRESRGFGFI 91
>gi|440906208|gb|ELR56498.1| Putative RNA-binding protein 19 [Bos grunniens mutus]
Length = 947
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
L V NL Y ++ +DL ++F R G V +++ P D T++ +GFAFV
Sbjct: 407 LFVRNLPYTSSEEDLEKLFSRYGPVSELHYPIDSLTKKPKGFAFV 451
>gi|449298181|gb|EMC94198.1| hypothetical protein BAUCODRAFT_74746 [Baudoinia compniacensis
UAMH 10762]
Length = 178
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 5/61 (8%)
Query: 5 RPPP-----RIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAF 59
RPP ++ +L V NL++ TT + + +F +CGE+ + + DRFT+ GF F
Sbjct: 35 RPPSPDLEEKLSSATTLYVGNLSFYTTEEQIHALFSKCGEIKRLVMGLDRFTKTPCGFCF 94
Query: 60 V 60
V
Sbjct: 95 V 95
>gi|292616346|ref|XP_002662984.1| PREDICTED: polyadenylate-binding protein 2-B-like [Danio rerio]
gi|292616348|ref|XP_002662985.1| PREDICTED: polyadenylate-binding protein 2-B-like [Danio rerio]
Length = 163
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
S+ V N+ Y T D+L F CG V + IP +RFT +GFA++
Sbjct: 38 SIYVGNVDYGATADELEMYFNSCGHVNRVTIPYNRFTGHPKGFAYI 83
>gi|406985531|gb|EKE06283.1| RNP-1 like protein RNA-binding protein [uncultured bacterium]
Length = 83
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 26/48 (54%)
Query: 13 MVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
M L + NL++ T DDLR F G V D + DR T SRGF FV
Sbjct: 1 MKKLFIGNLSWEVTSDDLRAFFASFGTVIDAVVIMDRMTGRSRGFGFV 48
>gi|294947288|ref|XP_002785313.1| serine/arginine rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
gi|239899086|gb|EER17109.1| serine/arginine rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
Length = 281
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 29/50 (58%)
Query: 11 EGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
EG SL V NL P LR FER G V D+YIP D +++ RGF FV
Sbjct: 142 EGSCSLLVRNLPDEVNPMRLRDAFERFGYVRDVYIPLDYYSKRPRGFGFV 191
>gi|20664272|pdb|1L3K|A Chain A, Up1, The Two Rna-Recognition Motif Domain Of Hnrnp A1
gi|55670114|pdb|1U1K|A Chain A, Crystal Structure Of Up1 Complexed With D(Ttagggtt 7da
Ggg); A Human Telomeric Repeat Containing
7-Deaza-Adenine
gi|55670116|pdb|1U1L|A Chain A, Crystal Structure Of Up1 Complexed With D(Ttagggtt Prn
Ggg); A Human Telomeric Repeat Containing Nebularine
gi|55670118|pdb|1U1M|A Chain A, Crystal Structure Of Up1 Complexed With D(Ttagggtta 7gu
Gg); A Human Telomeric Repeat Containing
7-Deaza-Guanine
gi|55670120|pdb|1U1N|A Chain A, Crystal Structure Of Up1 Complexed With D(Ttagggtta
(Prn) Gg); A Human Telomeric Repeat Containing
Nebularine
gi|55670122|pdb|1U1O|A Chain A, Crystal Structure Of Up1 Complexed With
D(Ttagggttag(Di)g); A Human Telomeric Repeat Containing
Inosine
gi|55670124|pdb|1U1P|A Chain A, Crystal Structure Of Up1 Complexed With D(Ttagggtta 2pr
Gg); A Human Telomeric Repeat Containing 2-Aminopurine
gi|55670126|pdb|1U1Q|A Chain A, Crystal Structure Of Up1 Complexed With
D(Ttagggtta(Di)gg); A Human Telomeric Repeat Containing
Inosine
gi|55670128|pdb|1U1R|A Chain A, Crystal Structure Of Up1 Complexed With
D(Ttagggttag(2pr) G); A Human Telomeric Repeat
Containing 2-Aminopurine
Length = 196
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 32/60 (53%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MS P E + L + L++ TT + LR FE+ G + D + RD T+ SRGF FV
Sbjct: 1 MSKSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFV 60
>gi|413941668|gb|AFW74317.1| hypothetical protein ZEAMMB73_670043 [Zea mays]
Length = 837
Score = 43.5 bits (101), Expect = 0.018, Method: Composition-based stats.
Identities = 20/43 (46%), Positives = 26/43 (60%)
Query: 18 VDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
V N+ + DDLRR F G I + RDRFT++SRG A+V
Sbjct: 675 VSNIDLKANEDDLRRFFSDIGGATAIRLLRDRFTKKSRGLAYV 717
>gi|348526013|ref|XP_003450515.1| PREDICTED: RNA-binding protein Musashi homolog 2-like
[Oreochromis niloticus]
Length = 261
Score = 43.5 bits (101), Expect = 0.018, Method: Composition-based stats.
Identities = 18/43 (41%), Positives = 28/43 (65%)
Query: 18 VDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+ L+++T+PD LR F + GE+ + + RD T+ SRGF FV
Sbjct: 25 IGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFV 67
>gi|393788677|ref|ZP_10376804.1| hypothetical protein HMPREF1068_03084 [Bacteroides nordii
CL02T12C05]
gi|392654357|gb|EIY48005.1| hypothetical protein HMPREF1068_03084 [Bacteroides nordii
CL02T12C05]
Length = 81
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 29/47 (61%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+++ V NL+Y DLR+V E G V + + DR TR S+GFAF+
Sbjct: 1 MNMYVGNLSYNVKESDLRQVMEEYGTVESVKLITDRDTRRSKGFAFI 47
>gi|296478475|tpg|DAA20590.1| TPA: RNA binding motif protein 19 [Bos taurus]
Length = 825
Score = 43.5 bits (101), Expect = 0.018, Method: Composition-based stats.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
L V NL Y ++ +DL ++F R G V +++ P D T++ +GFAFV
Sbjct: 365 LFVRNLPYTSSEEDLEKLFSRYGPVSELHYPIDSLTKKPKGFAFV 409
>gi|73973899|ref|XP_532229.2| PREDICTED: serine/arginine-rich splicing factor 12 [Canis lupus
familiaris]
Length = 326
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 26/35 (74%)
Query: 27 PDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
P+DLRR F R G + D+YIP D +TR RGFA+V+
Sbjct: 80 PEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQ 114
>gi|397504738|ref|XP_003822938.1| PREDICTED: serine/arginine-rich splicing factor 12 [Pan paniscus]
gi|426353976|ref|XP_004044448.1| PREDICTED: serine/arginine-rich splicing factor 12 [Gorilla
gorilla gorilla]
Length = 257
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 26/35 (74%)
Query: 27 PDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
P+DLRR F R G + D+YIP D +TR RGFA+V+
Sbjct: 12 PEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQ 46
>gi|353235522|emb|CCA67534.1| related to glycine-rich RNA-binding protein [Piriformospora
indica DSM 11827]
Length = 236
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 27/45 (60%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+ V NL++ TT D LR F + G V D + RDR T SRGF FV
Sbjct: 5 IYVGNLSWNTTDDTLREAFRQYGNVVDSIVMRDRETGRSRGFGFV 49
>gi|428166035|gb|EKX35018.1| translation initiation factor 3, subunit G [Guillardia theta
CCMP2712]
Length = 351
Score = 43.5 bits (101), Expect = 0.018, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 33/53 (62%)
Query: 8 PRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
P+ E +L+V N++ T +D+ +F++ G + + +P DR T E RGFAF+
Sbjct: 190 PQEEEKATLRVTNVSTDATREDMHELFKQFGPIARVSVPTDRATGEGRGFAFI 242
>gi|395862544|ref|XP_003803504.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like
[Otolemur garnettii]
Length = 172
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 32/60 (53%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MS P E + L + L++ TT + LR FE+ G + D + RD T+ SRGF FV
Sbjct: 1 MSKSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFV 60
>gi|157831273|pdb|1HA1|A Chain A, Hnrnp A1 (Rbd1,2) From Homo Sapiens
Length = 184
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 32/60 (53%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MS P E + L + L++ TT + LR FE+ G + D + RD T+ SRGF FV
Sbjct: 1 MSKSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFV 60
>gi|444723044|gb|ELW63709.1| putative RNA-binding protein 19 [Tupaia chinensis]
Length = 1033
Score = 43.5 bits (101), Expect = 0.018, Method: Composition-based stats.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
L V NL Y +T +DL ++F + G V +++ P D T++ +GFAFV
Sbjct: 506 LFVRNLPYTSTEEDLEKLFSKYGPVSELHYPIDSLTKKPKGFAFV 550
>gi|443897375|dbj|GAC74716.1| nuclear porin [Pseudozyma antarctica T-34]
Length = 694
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 30/55 (54%)
Query: 6 PPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
PP + + V L + TT D LRR F + GEVG + RD T SRGFAF+
Sbjct: 258 PPHEMPEEGKMFVGGLNWDTTEDSLRRYFSQFGEVGHCTVMRDANTGRSRGFAFL 312
>gi|1711240|dbj|BAA13161.1| TIS [Mus musculus]
gi|119617170|gb|EAW96764.1| heterogeneous nuclear ribonucleoprotein A1, isoform CRA_d [Homo
sapiens]
Length = 268
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 32/60 (53%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MS P E + L + L++ TT + LR FE+ G + D + RD T+ SRGF FV
Sbjct: 1 MSKSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFV 60
>gi|403261884|ref|XP_003923335.1| PREDICTED: serine/arginine-rich splicing factor 12 [Saimiri
boliviensis boliviensis]
Length = 271
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 26/35 (74%)
Query: 27 PDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
P+DLRR F R G + D+YIP D +TR RGFA+V+
Sbjct: 26 PEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQ 60
>gi|351706129|gb|EHB09048.1| Putative heterogeneous nuclear ribonucleoprotein A1-like protein
3 [Heterocephalus glaber]
Length = 313
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 32/60 (53%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MS P E + L + L++ TT + LR FE+ G + D + RD T+ SRGF FV
Sbjct: 1 MSKSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFV 60
>gi|426372865|ref|XP_004053334.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Gorilla gorilla gorilla]
Length = 306
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 32/60 (53%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MS P E + L + L++ TT + LR FE+ G + D + RD T+ SRGF FV
Sbjct: 126 MSKSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFV 185
>gi|291402435|ref|XP_002717573.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 3
[Oryctolagus cuniculus]
Length = 268
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 32/60 (53%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MS P E + L + L++ TT + LR FE+ G + D + RD T+ SRGF FV
Sbjct: 1 MSKSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFV 60
>gi|158340910|ref|YP_001522078.1| RNA-binding protein [Acaryochloris marina MBIC11017]
gi|158311151|gb|ABW32764.1| RNA-binding protein [Acaryochloris marina MBIC11017]
Length = 77
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 29/48 (60%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
+S+ V NL+Y T DL+ F + G V + +P DR T + +GFAFV
Sbjct: 1 MSIYVGNLSYAVTEKDLKIAFAQYGAVKQVKLPIDRETGKKQGFAFVE 48
>gi|427729329|ref|YP_007075566.1| RRM domain-containing RNA-binding protein [Nostoc sp. PCC 7524]
gi|427365248|gb|AFY47969.1| RRM domain-containing RNA-binding protein [Nostoc sp. PCC 7524]
Length = 102
Score = 43.5 bits (101), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+S+ V NL+Y+ T +D++ VF G V + +P DR T RGFAFV
Sbjct: 1 MSIYVGNLSYQVTEEDIKGVFAEYGTVKRVQVPTDRETGRLRGFAFV 47
>gi|291394515|ref|XP_002713754.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 2
[Oryctolagus cuniculus]
Length = 274
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 32/60 (53%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MS P E + L + L++ TT + LR FE+ G + D + RD T+ SRGF FV
Sbjct: 1 MSKSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFV 60
>gi|221484527|gb|EEE22821.1| DEAH-box RNA/DNA helicase, putative [Toxoplasma gondii GT1]
Length = 2185
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 23/46 (50%), Positives = 29/46 (63%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+L V NL R + ++RR+FE EV D I + TRESRGFAFV
Sbjct: 1875 TLYVSNLPTRMSVAEIRRIFEEVAEVQDCRIVSNPVTRESRGFAFV 1920
>gi|395325784|gb|EJF58201.1| hypothetical protein DICSQDRAFT_67439, partial [Dichomitus
squalens LYAD-421 SS1]
Length = 94
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 26/41 (63%)
Query: 20 NLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
NL++ TT D+LR F G++ D + RDR T SRGF FV
Sbjct: 1 NLSWNTTDDNLRNAFSTYGQILDSIVMRDRDTGRSRGFGFV 41
>gi|359073189|ref|XP_003587038.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein
A1-like 3-like [Bos taurus]
Length = 321
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 32/60 (53%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MS P E + L + L++ TT + LR FE+ G + D + RD T+ SRGF FV
Sbjct: 1 MSTSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFV 60
>gi|426234977|ref|XP_004011468.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein
A1-like 3-like [Ovis aries]
Length = 319
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 32/60 (53%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MS P E + L + L++ TT + LR FE+ G + D + RD T+ SRGF FV
Sbjct: 1 MSKSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFV 60
>gi|344255674|gb|EGW11778.1| Putative heterogeneous nuclear ribonucleoprotein A1-like protein
3 [Cricetulus griseus]
Length = 340
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 32/60 (53%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MS P E + L + L++ TT + LR FE+ G + D + RD T+ SRGF FV
Sbjct: 1 MSKSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFV 60
>gi|301774570|ref|XP_002922705.1| PREDICTED: splicing factor, arginine/serine-rich 13B-like
[Ailuropoda melanoleuca]
Length = 269
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 26/35 (74%)
Query: 27 PDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
P+DLRR F R G + D+YIP D +TR RGFA+V+
Sbjct: 24 PEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQ 58
>gi|148664549|gb|EDK96965.1| mCG123153 [Mus musculus]
Length = 153
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 32/60 (53%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MS P E + L + L++ TT + LR FE+ G + D + RD T+ SRGF FV
Sbjct: 1 MSKSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFV 60
>gi|449297462|gb|EMC93480.1| hypothetical protein BAUCODRAFT_37162 [Baudoinia compniacensis UAMH
10762]
Length = 296
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 31/48 (64%)
Query: 13 MVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+ +L+V N++ DLR +FER G V +++ +DR T ++GFAFV
Sbjct: 215 LATLRVTNVSEFAEEQDLREIFERWGRVTRVFLAKDRETGRAKGFAFV 262
>gi|291389275|ref|XP_002711073.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 2
[Oryctolagus cuniculus]
Length = 269
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 32/60 (53%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MS P E + L + L++ TT + LR FE+ G + D + RD T+ SRGF FV
Sbjct: 1 MSKSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFV 60
>gi|302832365|ref|XP_002947747.1| glycine-rich RNA-binding protein-like protein [Volvox carteri f.
nagariensis]
gi|300267095|gb|EFJ51280.1| glycine-rich RNA-binding protein-like protein [Volvox carteri f.
nagariensis]
Length = 193
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 27/45 (60%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
L V NL++ T DDL +F + G V D ++ DR T SRGF FV
Sbjct: 48 LYVGNLSWDTRADDLNGLFSKFGAVEDAFVATDRETGRSRGFGFV 92
>gi|296190480|ref|XP_002743214.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like
isoform 2 [Callithrix jacchus]
Length = 320
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 32/60 (53%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MS P E + L + L++ TT + LR FE+ G + D + RD T+ SRGF FV
Sbjct: 1 MSKSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFV 60
>gi|440789720|gb|ELR11019.1| RNA binding protein, putative [Acanthamoeba castellanii str. Neff]
Length = 838
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 32/45 (71%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
L V NL + + DDL ++F++ G++ +++IP DR T++ RG A+V
Sbjct: 329 LFVRNLPFSASEDDLYKLFKKHGDISEVHIPIDRETKKPRGMAYV 373
>gi|133256|sp|P21522.1|ROA1_SCHAM RecName: Full=Heterogeneous nuclear ribonucleoprotein A1, A2/B1
homolog
gi|10107|emb|CAA38481.1| mammalian A1, A2 /B1 hnRNP homologue [Schistocerca americana]
Length = 342
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%), Gaps = 4/58 (6%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+G P E + L + L YRTT + L++ FE+ GE+ D+ + +D T+ SRGF F+
Sbjct: 10 HGEP----EHVRKLFIGGLDYRTTDESLKQHFEQWGEIVDVVVMKDPKTKRSRGFGFI 63
>gi|168016155|ref|XP_001760615.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688312|gb|EDQ74690.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 176
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 33/58 (56%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+G + ++ V NL + T +DL +F G++G + I +D+ TRES+G AF+
Sbjct: 8 HGSSGGLVPSKSTVYVSNLDFSLTNNDLHTIFSTFGKIGKVTIVKDKQTRESKGVAFI 65
>gi|119621693|gb|EAX01288.1| hCG2020860, isoform CRA_a [Homo sapiens]
Length = 214
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 32/60 (53%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MS P E + L + L++ TT + LR FE+ G + D + RD T+ SRGF FV
Sbjct: 1 MSKSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFV 60
>gi|441632410|ref|XP_003252929.2| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 2
[Nomascus leucogenys]
Length = 426
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 32/60 (53%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MS P E + L + L++ TT + LR FE+ G + D + RD T+ SRGF FV
Sbjct: 54 MSKSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFV 113
>gi|407041600|gb|EKE40843.1| RNA recognition motif domain containing protein [Entamoeba
nuttalli P19]
Length = 135
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 31/46 (67%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
S+ V N+ Y TT ++L +FERCG V + IP ++ T+++ G+A +
Sbjct: 40 SVHVSNVEYTTTKEELEDLFERCGVVLKVNIPINQLTQKTMGYANI 85
>gi|327282636|ref|XP_003226048.1| PREDICTED: probable RNA-binding protein 19-like isoform 2 [Anolis
carolinensis]
Length = 938
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
L V NL Y +T +DL ++F + G + +I+ P D T++ +GFAFV
Sbjct: 401 LFVRNLPYTSTEEDLEKLFSKYGPLSEIHFPIDGLTKKPKGFAFV 445
>gi|327282634|ref|XP_003226047.1| PREDICTED: probable RNA-binding protein 19-like isoform 1 [Anolis
carolinensis]
Length = 945
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
L V NL Y +T +DL ++F + G + +I+ P D T++ +GFAFV
Sbjct: 401 LFVRNLPYTSTEEDLEKLFSKYGPLSEIHFPIDGLTKKPKGFAFV 445
>gi|307106096|gb|EFN54343.1| hypothetical protein CHLNCDRAFT_135593 [Chlorella variabilis]
Length = 224
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 28/47 (59%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
SL V NL + DDLR E+ G V D+Y+P+D +T RG AFV
Sbjct: 11 CSLLVRNLAPDVSGDDLRYAAEKYGRVKDVYVPKDYYTGRPRGIAFV 57
>gi|345320496|ref|XP_001519931.2| PREDICTED: hypothetical protein LOC100090925, partial
[Ornithorhynchus anatinus]
Length = 369
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 25/34 (73%)
Query: 28 DDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
+DLRR F R G + D+Y+P D +TR RGFA+V+
Sbjct: 103 EDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQ 136
>gi|225543108|ref|NP_001139415.1| sex lethal [Tribolium castaneum]
Length = 218
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 23/61 (37%), Positives = 32/61 (52%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+SY RPP +L + NL T DD+ R+F GE+ + +D+ T RG AFV
Sbjct: 100 VSYSRPPGADMKASNLYITNLPKDVTEDDVHRLFSNYGEIIQKSVLKDKITGMPRGVAFV 159
Query: 61 R 61
R
Sbjct: 160 R 160
>gi|242823058|ref|XP_002488014.1| glycine-rich RNA-binding protein, putative [Talaromyces
stipitatus ATCC 10500]
gi|218712935|gb|EED12360.1| glycine-rich RNA-binding protein, putative [Talaromyces
stipitatus ATCC 10500]
Length = 134
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%)
Query: 13 MVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
M L + L + TT D LR+ FE+ G + + + +DR T SRGF FVR
Sbjct: 1 MSKLFIGGLAWHTTDDTLRQGFEKFGTIEEAIVIKDRDTNRSRGFGFVR 49
>gi|354466061|ref|XP_003495494.1| PREDICTED: serine/arginine-rich splicing factor 12-like, partial
[Cricetulus griseus]
Length = 249
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 22/44 (50%), Positives = 29/44 (65%)
Query: 18 VDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
V N + P+DLRR F R G + D+YIP D +TR RGFA+V+
Sbjct: 2 VRNCAGDSRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQ 45
>gi|348677474|gb|EGZ17291.1| hypothetical protein PHYSODRAFT_559962 [Phytophthora sojae]
Length = 330
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 31/47 (65%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+L+V N++ T DDL+ +F G V +Y+ +DR T +SRGFAFV
Sbjct: 218 ATLRVTNVSPDTREDDLKELFRAFGPVSRVYLAKDRETFQSRGFAFV 264
>gi|332218114|ref|XP_003258205.1| PREDICTED: serine/arginine-rich splicing factor 12 [Nomascus
leucogenys]
Length = 249
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 26/35 (74%)
Query: 27 PDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
P+DLRR F R G + D+YIP D +TR RGFA+V+
Sbjct: 4 PEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQ 38
>gi|443691822|gb|ELT93572.1| hypothetical protein CAPTEDRAFT_180669 [Capitella teleta]
Length = 243
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 28/43 (65%)
Query: 18 VDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+ L+++TTP+ LR F + GE+ + + RD T+ SRGF FV
Sbjct: 28 IGGLSWQTTPEGLREYFAKYGEISECMVMRDPITKRSRGFGFV 70
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 28/43 (65%)
Query: 18 VDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
V L+ TT DD+++ FE+ G++ D + D+ T+ RGFAFV
Sbjct: 121 VGGLSASTTVDDVKQYFEQFGKIEDAMLMFDKATQRHRGFAFV 163
>gi|425466928|ref|ZP_18846222.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC
9809]
gi|389830427|emb|CCI27639.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC
9809]
Length = 97
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 31/47 (65%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+S+ V NL+Y + +DL VF+ G+V ++IP D+ T RGFAFV
Sbjct: 1 MSIFVGNLSYEISQEDLVDVFKEYGKVQRVHIPVDKETGRKRGFAFV 47
>gi|383767221|ref|YP_005446202.1| RNA-binding protein [Phycisphaera mikurensis NBRC 102666]
gi|381387489|dbj|BAM04305.1| RNA-binding protein [Phycisphaera mikurensis NBRC 102666]
Length = 112
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 27/47 (57%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+ + V NL +RTT +DL +F G V D + DR T SRGF FV
Sbjct: 1 MKMYVGNLAWRTTTEDLEALFSNYGSVSDAIVLTDRETGRSRGFGFV 47
>gi|158338654|ref|YP_001519831.1| RNA-binding protein [Acaryochloris marina MBIC11017]
gi|359461822|ref|ZP_09250385.1| RNA-binding protein [Acaryochloris sp. CCMEE 5410]
gi|158308895|gb|ABW30512.1| RNA-binding protein [Acaryochloris marina MBIC11017]
Length = 86
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 29/47 (61%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+S+ V NL+Y + DD+ VF G+V +++P DR T RGF FV
Sbjct: 1 MSIYVGNLSYEASQDDVTAVFAEYGKVVKVHLPVDRETGRKRGFGFV 47
>gi|119617172|gb|EAW96766.1| heterogeneous nuclear ribonucleoprotein A1, isoform CRA_f [Homo
sapiens]
Length = 208
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 32/60 (53%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MS P E + L + L++ TT + LR FE+ G + D + RD T+ SRGF FV
Sbjct: 1 MSKSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFV 60
>gi|443917389|gb|ELU38114.1| RNA recognition motif domain-containing protein [Rhizoctonia
solani AG-1 IA]
Length = 131
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 31/48 (64%)
Query: 13 MVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+ +L+V N++ T DDLR +F + G V +Y+ RDR T +G+AFV
Sbjct: 46 LPTLRVTNVSEDTQEDDLRDLFSKFGRVARVYVGRDRETGAGKGYAFV 93
>gi|428203044|ref|YP_007081633.1| RRM domain-containing RNA-binding protein [Pleurocapsa sp. PCC
7327]
gi|427980476|gb|AFY78076.1| RRM domain-containing RNA-binding protein [Pleurocapsa sp. PCC
7327]
Length = 103
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 28/47 (59%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+S+ V NL+Y T +L VF G V +++P DR T RGFAFV
Sbjct: 1 MSIYVGNLSYEVTEAELNSVFAEYGSVKRVHLPTDRETGRMRGFAFV 47
>gi|426224337|ref|XP_004006328.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like
isoform 2 [Ovis aries]
Length = 310
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 32/60 (53%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MS P E + L + L++ TT + LR FE+ G + D + RD T+ SRGF FV
Sbjct: 1 MSKSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFV 60
>gi|75517570|gb|AAI03708.1| HNRPA1 protein [Homo sapiens]
Length = 267
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 32/60 (53%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MS P E + L + L++ TT + LR FE+ G + D + RD T+ SRGF FV
Sbjct: 1 MSKSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFV 60
>gi|403271005|ref|XP_003927441.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like
[Saimiri boliviensis boliviensis]
Length = 320
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 32/60 (53%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MS P E + L + L++ TT + LR FE+ G + D + RD T+ SRGF FV
Sbjct: 1 MSKSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFV 60
>gi|358415649|ref|XP_003583166.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein
A1-like 3-like [Bos taurus]
Length = 321
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 32/60 (53%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MS P E + L + L++ TT + LR FE+ G + D + RD T+ SRGF FV
Sbjct: 1 MSTSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFV 60
>gi|224107319|ref|XP_002314444.1| predicted protein [Populus trichocarpa]
gi|222863484|gb|EEF00615.1| predicted protein [Populus trichocarpa]
Length = 252
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 30/53 (56%)
Query: 9 RIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
R L + NL P+DLR FE+ G + DIY+P++ T E RGF FV+
Sbjct: 43 RSPASSGLLIRNLPLDARPEDLRGPFEKFGPLKDIYLPKNYHTGEPRGFGFVK 95
>gi|390438650|ref|ZP_10227098.1| putative RNA-binding protein rbpF [Microcystis sp. T1-4]
gi|389837939|emb|CCI31222.1| putative RNA-binding protein rbpF [Microcystis sp. T1-4]
Length = 97
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 29/47 (61%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+S+ V NL+Y + +DL VF G V ++IP DR T RGFAFV
Sbjct: 1 MSIFVGNLSYEISQEDLTDVFAEYGTVQRVHIPVDRETGRKRGFAFV 47
>gi|304311883|ref|YP_003811481.1| RNA-binding region RNP-1 (RNA recognition motif) [gamma
proteobacterium HdN1]
gi|301797616|emb|CBL45837.1| RNA-binding region RNP-1 (RNA recognition motif) [gamma
proteobacterium HdN1]
Length = 92
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 30/47 (63%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+++ V NL Y + ++L+ F GEV + + +D+FT +S+GF FV
Sbjct: 1 MNIYVGNLAYGVSEEELKEAFGAFGEVASVSLIKDKFTGQSKGFGFV 47
>gi|124505987|ref|XP_001351591.1| Ser/Arg-rich splicing factor, putative [Plasmodium falciparum
3D7]
gi|23504518|emb|CAD51398.1| Ser/Arg-rich splicing factor, putative [Plasmodium falciparum
3D7]
Length = 308
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 31/47 (65%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+SL + L + T+P +R F+R G + D+Y+P D +T+E RGF FV
Sbjct: 12 MSLLIRKLKFDTSPSIVREKFKRFGAIKDVYLPIDYYTKEPRGFGFV 58
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.326 0.146 0.451
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,058,645,423
Number of Sequences: 23463169
Number of extensions: 33022501
Number of successful extensions: 119500
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 6638
Number of HSP's successfully gapped in prelim test: 583
Number of HSP's that attempted gapping in prelim test: 110493
Number of HSP's gapped (non-prelim): 9570
length of query: 61
length of database: 8,064,228,071
effective HSP length: 33
effective length of query: 28
effective length of database: 7,289,943,494
effective search space: 204118417832
effective search space used: 204118417832
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 69 (31.2 bits)