BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy7051
(158 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|242005811|ref|XP_002423754.1| serine/arginine rich splicing factor, putative [Pediculus humanus
corporis]
gi|212506956|gb|EEB11016.1| serine/arginine rich splicing factor, putative [Pediculus humanus
corporis]
Length = 246
Score = 199 bits (505), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 99/119 (83%), Positives = 107/119 (89%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
+SYGRPPPRI+GMVSLKVDNLT+RTTPDDLRRVFERCGEVGDIYIPRDRF+RESRGFAFV
Sbjct: 48 VSYGRPPPRIDGMVSLKVDNLTFRTTPDDLRRVFERCGEVGDIYIPRDRFSRESRGFAFV 107
Query: 61 RFFDKRDAEDALDAMDGRMLDGRELRVQMARYGRPPSSSRSRGGRDRDRRRDRSRSRDR 119
RF+DKRDAEDALDAMDGR+LDGRELRVQMARYGRP S RSRG R D + R +DR
Sbjct: 108 RFYDKRDAEDALDAMDGRILDGRELRVQMARYGRPSSPYRSRGRRRGDHDQGVVRDQDR 166
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 38/50 (76%)
Query: 13 MVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRF 62
M SLKV N++YRT DL +F + G+VGD+YIPRD+ ++ SRGFAFV +
Sbjct: 1 MTSLKVGNISYRTRTLDLHHIFGKFGDVGDVYIPRDKHSKHSRGFAFVSY 50
>gi|307169015|gb|EFN61874.1| Splicing factor, arginine/serine-rich 2 [Camponotus floridanus]
Length = 208
Score = 194 bits (494), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 92/97 (94%), Positives = 96/97 (98%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPPRI+GMVSLKVDNLTYRTTP+DLRRVFERCGEVGDIYIPRDRFTRESRGFAFV
Sbjct: 1 MSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
Query: 61 RFFDKRDAEDALDAMDGRMLDGRELRVQMARYGRPPS 97
RF+DKRDAEDALDAMDGR+LDGRELRVQMARYGRP S
Sbjct: 61 RFYDKRDAEDALDAMDGRLLDGRELRVQMARYGRPTS 97
>gi|332373880|gb|AEE62081.1| unknown [Dendroctonus ponderosae]
Length = 168
Score = 194 bits (493), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 95/97 (97%), Positives = 96/97 (98%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV
Sbjct: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
Query: 61 RFFDKRDAEDALDAMDGRMLDGRELRVQMARYGRPPS 97
RF+DKRDAEDALDAMDGRMLDGRELRVQMARYGRP S
Sbjct: 61 RFYDKRDAEDALDAMDGRMLDGRELRVQMARYGRPTS 97
>gi|345486316|ref|XP_003425445.1| PREDICTED: serine/arginine-rich splicing factor 2-like [Nasonia
vitripennis]
Length = 198
Score = 191 bits (486), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 92/97 (94%), Positives = 96/97 (98%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPPRI+GMVSLKVDNLTYRTTP+DLRRVFERCGEVGDIYIPRDRFTRESRGFAFV
Sbjct: 1 MSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
Query: 61 RFFDKRDAEDALDAMDGRMLDGRELRVQMARYGRPPS 97
RF+DKRDAEDALDAMDGRM+DGRELRVQMARYGRP S
Sbjct: 61 RFYDKRDAEDALDAMDGRMVDGRELRVQMARYGRPTS 97
>gi|322789593|gb|EFZ14819.1| hypothetical protein SINV_10987 [Solenopsis invicta]
gi|332021256|gb|EGI61641.1| Splicing factor, arginine/serine-rich 2 [Acromyrmex echinatior]
Length = 175
Score = 191 bits (484), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 92/97 (94%), Positives = 96/97 (98%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPPRI+GMVSLKVDNLTYRTTP+DLRRVFERCGEVGDIYIPRDRFTRESRGFAFV
Sbjct: 1 MSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
Query: 61 RFFDKRDAEDALDAMDGRMLDGRELRVQMARYGRPPS 97
RF+DKRDAEDALDAMDGR+LDGRELRVQMARYGRP S
Sbjct: 61 RFYDKRDAEDALDAMDGRLLDGRELRVQMARYGRPTS 97
>gi|307197633|gb|EFN78812.1| Splicing factor, arginine/serine-rich 2 [Harpegnathos saltator]
Length = 175
Score = 191 bits (484), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 92/97 (94%), Positives = 96/97 (98%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPPRI+GMVSLKVDNLTYRTTP+DLRRVFERCGEVGDIYIPRDRFTRESRGFAFV
Sbjct: 1 MSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
Query: 61 RFFDKRDAEDALDAMDGRMLDGRELRVQMARYGRPPS 97
RF+DKRDAEDALDAMDGR+LDGRELRVQMARYGRP S
Sbjct: 61 RFYDKRDAEDALDAMDGRLLDGRELRVQMARYGRPTS 97
>gi|110762781|ref|XP_393352.2| PREDICTED: serine/arginine-rich splicing factor 2-like [Apis
mellifera]
gi|340724784|ref|XP_003400761.1| PREDICTED: serine/arginine-rich splicing factor 2-like [Bombus
terrestris]
gi|350398198|ref|XP_003485116.1| PREDICTED: serine/arginine-rich splicing factor 2-like [Bombus
impatiens]
gi|380022396|ref|XP_003695032.1| PREDICTED: serine/arginine-rich splicing factor 2-like [Apis
florea]
gi|383865619|ref|XP_003708270.1| PREDICTED: serine/arginine-rich splicing factor 2-like [Megachile
rotundata]
Length = 176
Score = 190 bits (483), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 92/97 (94%), Positives = 96/97 (98%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPPRI+GMVSLKVDNLTYRTTP+DLRRVFERCGEVGDIYIPRDRFTRESRGFAFV
Sbjct: 1 MSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
Query: 61 RFFDKRDAEDALDAMDGRMLDGRELRVQMARYGRPPS 97
RF+DKRDAEDALDAMDGR+LDGRELRVQMARYGRP S
Sbjct: 61 RFYDKRDAEDALDAMDGRLLDGRELRVQMARYGRPTS 97
>gi|312373610|gb|EFR21320.1| hypothetical protein AND_17210 [Anopheles darlingi]
Length = 170
Score = 188 bits (478), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 92/102 (90%), Positives = 95/102 (93%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRF 62
Y RPPPRI+GM+SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDR TRESRGFAFVRF
Sbjct: 4 YARPPPRIDGMISLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRHTRESRGFAFVRF 63
Query: 63 FDKRDAEDALDAMDGRMLDGRELRVQMARYGRPPSSSRSRGG 104
+DKRDAEDALDAMDGRMLDGRELRVQMARYGRP S R GG
Sbjct: 64 YDKRDAEDALDAMDGRMLDGRELRVQMARYGRPTSPQRRGGG 105
>gi|170041667|ref|XP_001848576.1| serine/arginine rich splicing factor [Culex quinquefasciatus]
gi|167865236|gb|EDS28619.1| serine/arginine rich splicing factor [Culex quinquefasciatus]
Length = 186
Score = 187 bits (476), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 91/98 (92%), Positives = 95/98 (96%)
Query: 2 SYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
SYGRPPPRI+GMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDR TRESRGFAFVR
Sbjct: 3 SYGRPPPRIDGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRHTRESRGFAFVR 62
Query: 62 FFDKRDAEDALDAMDGRMLDGRELRVQMARYGRPPSSS 99
F+DKRDA+DALDAMDGRMLDGRELRVQMARYGRP S +
Sbjct: 63 FYDKRDAQDALDAMDGRMLDGRELRVQMARYGRPTSPA 100
>gi|240849499|ref|NP_001155685.1| serine/arginine rich splicing factor-like [Acyrthosiphon pisum]
gi|239790824|dbj|BAH71947.1| ACYPI006902 [Acyrthosiphon pisum]
Length = 153
Score = 187 bits (475), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 90/93 (96%), Positives = 92/93 (98%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSY RPPPRIEGMVSLKVDNLTYRTTP+DLRRVFERCGEVGDIYIPRDRFTRESRGFAFV
Sbjct: 1 MSYSRPPPRIEGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
Query: 61 RFFDKRDAEDALDAMDGRMLDGRELRVQMARYG 93
RF+DKRDAEDALDAMDGRMLDGRELRVQMARYG
Sbjct: 61 RFYDKRDAEDALDAMDGRMLDGRELRVQMARYG 93
>gi|157125941|ref|XP_001654458.1| serine/arginine rich splicing factor [Aedes aegypti]
gi|157125943|ref|XP_001654459.1| serine/arginine rich splicing factor [Aedes aegypti]
gi|94469018|gb|ABF18358.1| predicted splicing factor [Aedes aegypti]
gi|108873468|gb|EAT37693.1| AAEL010340-PA [Aedes aegypti]
gi|108873469|gb|EAT37694.1| AAEL010340-PB [Aedes aegypti]
Length = 177
Score = 187 bits (474), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 90/96 (93%), Positives = 94/96 (97%)
Query: 2 SYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
SYGRPPPRI+GM+SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDR TRESRGFAFVR
Sbjct: 3 SYGRPPPRIDGMISLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRHTRESRGFAFVR 62
Query: 62 FFDKRDAEDALDAMDGRMLDGRELRVQMARYGRPPS 97
F+DKRDA+DALDAMDGRMLDGRELRVQMARYGRP S
Sbjct: 63 FYDKRDAQDALDAMDGRMLDGRELRVQMARYGRPTS 98
>gi|118790804|ref|XP_318826.3| AGAP009742-PA [Anopheles gambiae str. PEST]
gi|116118108|gb|EAA14228.3| AGAP009742-PA [Anopheles gambiae str. PEST]
Length = 174
Score = 186 bits (473), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 93/103 (90%), Positives = 96/103 (93%), Gaps = 1/103 (0%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRF 62
Y RPPPRI+GM+SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDR TRESRGFAFVRF
Sbjct: 11 YARPPPRIDGMISLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRHTRESRGFAFVRF 70
Query: 63 FDKRDAEDALDAMDGRMLDGRELRVQMARYGRPPSSSRSRGGR 105
+DKRDAEDALDAMDGRMLDGRELRVQMARYGRP S R RG R
Sbjct: 71 YDKRDAEDALDAMDGRMLDGRELRVQMARYGRPTSPQR-RGNR 112
>gi|114050755|ref|NP_001040152.1| Sr protein [Bombyx mori]
gi|87248221|gb|ABD36163.1| Sr protein [Bombyx mori]
Length = 154
Score = 185 bits (469), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 89/97 (91%), Positives = 95/97 (97%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPPRI+GMVSLKVDNLTYRTTP+DLRRVFERCGEVGDIYIPRDR+TRESRGFAFV
Sbjct: 1 MSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFV 60
Query: 61 RFFDKRDAEDALDAMDGRMLDGRELRVQMARYGRPPS 97
RFF++RDAE+ALD MDGRMLDGRELRVQMARYGRP S
Sbjct: 61 RFFERRDAEEALDTMDGRMLDGRELRVQMARYGRPSS 97
>gi|443429415|gb|AGC92700.1| serine/arginine-rich splicing factor 2-like protein [Heliconius
erato]
Length = 168
Score = 184 bits (468), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 88/101 (87%), Positives = 98/101 (97%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPPRI+GMVSLKVDNLTYRTTP+DLRRVFERCG+VGDIYIPRDR+TRESRGFAFV
Sbjct: 1 MSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGDVGDIYIPRDRYTRESRGFAFV 60
Query: 61 RFFDKRDAEDALDAMDGRMLDGRELRVQMARYGRPPSSSRS 101
RF+D+RDAE+ALD++DGRMLDGRELRVQMARYGRP S R+
Sbjct: 61 RFYDRRDAEEALDSLDGRMLDGRELRVQMARYGRPSSPYRT 101
>gi|348019723|gb|AEP43803.1| SR-protein [Biston betularia]
Length = 152
Score = 184 bits (467), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 88/97 (90%), Positives = 96/97 (98%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPPRI+GMVSLKVDNLTYRTTP+DLRRVFERCGEVGDIYIPRDR+TRESRGFAFV
Sbjct: 1 MSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFV 60
Query: 61 RFFDKRDAEDALDAMDGRMLDGRELRVQMARYGRPPS 97
RF+D+RDAE+ALD++DGRMLDGRELRVQMARYGRP S
Sbjct: 61 RFYDRRDAEEALDSLDGRMLDGRELRVQMARYGRPSS 97
>gi|198474085|ref|XP_001356555.2| GA18884 [Drosophila pseudoobscura pseudoobscura]
gi|198138240|gb|EAL33619.2| GA18884 [Drosophila pseudoobscura pseudoobscura]
Length = 207
Score = 184 bits (467), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 87/95 (91%), Positives = 93/95 (97%)
Query: 5 RPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFD 64
RPPPRI+GMVSLKVDNLTYRTTP+DLRRVFERCGEVGDIYIPRDR+TRESRGFAFVRF+D
Sbjct: 14 RPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYD 73
Query: 65 KRDAEDALDAMDGRMLDGRELRVQMARYGRPPSSS 99
KRDAEDAL+AMDGRMLDGRELRVQMARYGRP S +
Sbjct: 74 KRDAEDALEAMDGRMLDGRELRVQMARYGRPSSPT 108
>gi|357608819|gb|EHJ66166.1| putative serine/arginine rich splicing factor [Danaus plexippus]
Length = 165
Score = 183 bits (464), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 88/97 (90%), Positives = 96/97 (98%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPPRI+GMVSLKVDNLTYRTTPDDLRRVFERCG+VGDIYIPRDR+TRESRGFAFV
Sbjct: 1 MSYGRPPPRIDGMVSLKVDNLTYRTTPDDLRRVFERCGDVGDIYIPRDRYTRESRGFAFV 60
Query: 61 RFFDKRDAEDALDAMDGRMLDGRELRVQMARYGRPPS 97
RFF++RDAE+ALD++DGRMLDGRELRVQMARYGRP S
Sbjct: 61 RFFERRDAEEALDSLDGRMLDGRELRVQMARYGRPSS 97
>gi|261335957|emb|CBH09290.1| putative Sr protein [Heliconius melpomene]
Length = 165
Score = 182 bits (461), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 87/97 (89%), Positives = 96/97 (98%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPPRI+GMVSLKVDNLTYRTTP+DLRRVFERCG+VGDIYIPRDR+TRESRGFAFV
Sbjct: 1 MSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGDVGDIYIPRDRYTRESRGFAFV 60
Query: 61 RFFDKRDAEDALDAMDGRMLDGRELRVQMARYGRPPS 97
RF+D+RDAE+ALD++DGRMLDGRELRVQMARYGRP S
Sbjct: 61 RFYDRRDAEEALDSLDGRMLDGRELRVQMARYGRPSS 97
>gi|195435065|ref|XP_002065522.1| GK14626 [Drosophila willistoni]
gi|194161607|gb|EDW76508.1| GK14626 [Drosophila willistoni]
Length = 203
Score = 182 bits (461), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 87/95 (91%), Positives = 93/95 (97%)
Query: 5 RPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFD 64
RPPPRI+GMVSLKVDNLTYRTTP+DLRRVFERCGEVGDIYIPRDR+TRESRGFAFVRF+D
Sbjct: 16 RPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYD 75
Query: 65 KRDAEDALDAMDGRMLDGRELRVQMARYGRPPSSS 99
KRDAEDAL+AMDGRMLDGRELRVQMARYGRP S +
Sbjct: 76 KRDAEDALEAMDGRMLDGRELRVQMARYGRPSSPT 110
>gi|195035777|ref|XP_001989348.1| GH11678 [Drosophila grimshawi]
gi|193905348|gb|EDW04215.1| GH11678 [Drosophila grimshawi]
Length = 203
Score = 181 bits (460), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 86/92 (93%), Positives = 91/92 (98%)
Query: 4 GRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFF 63
RPPPRI+GMVSLKVDNLTYRTTP+DLRRVFERCGEVGDIYIPRDR+TRESRGFAFVRF+
Sbjct: 13 ARPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFY 72
Query: 64 DKRDAEDALDAMDGRMLDGRELRVQMARYGRP 95
DKRDAEDAL+AMDGRMLDGRELRVQMARYGRP
Sbjct: 73 DKRDAEDALEAMDGRMLDGRELRVQMARYGRP 104
>gi|194761376|ref|XP_001962905.1| GF15672 [Drosophila ananassae]
gi|190616602|gb|EDV32126.1| GF15672 [Drosophila ananassae]
Length = 199
Score = 181 bits (458), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 87/95 (91%), Positives = 93/95 (97%)
Query: 5 RPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFD 64
RPPPRI+GMVSLKVDNLTYRTTP+DLRRVFERCGEVGDIYIPRDR+TRESRGFAFVRF+D
Sbjct: 11 RPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYD 70
Query: 65 KRDAEDALDAMDGRMLDGRELRVQMARYGRPPSSS 99
KRDAEDAL+AMDGRMLDGRELRVQMARYGRP S +
Sbjct: 71 KRDAEDALEAMDGRMLDGRELRVQMARYGRPSSPT 105
>gi|195401200|ref|XP_002059202.1| GJ16161 [Drosophila virilis]
gi|194156076|gb|EDW71260.1| GJ16161 [Drosophila virilis]
Length = 202
Score = 181 bits (458), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 86/91 (94%), Positives = 91/91 (100%)
Query: 5 RPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFD 64
RPPPRI+GMVSLKVDNLTYRTTP+DLRRVFERCGEVGDIYIPRDR+TRESRGFAFVRF+D
Sbjct: 15 RPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYD 74
Query: 65 KRDAEDALDAMDGRMLDGRELRVQMARYGRP 95
KRDAEDAL+AMDGRMLDGRELRVQMARYGRP
Sbjct: 75 KRDAEDALEAMDGRMLDGRELRVQMARYGRP 105
>gi|289741385|gb|ADD19440.1| putative splicing factor [Glossina morsitans morsitans]
Length = 191
Score = 180 bits (456), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 87/96 (90%), Positives = 93/96 (96%)
Query: 2 SYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
S GRPPPRI+GM+SLKVDNLTYRTTP+DLRRVFERCGEVGDIYIPRDR+TRESRGFAFVR
Sbjct: 5 SGGRPPPRIDGMISLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVR 64
Query: 62 FFDKRDAEDALDAMDGRMLDGRELRVQMARYGRPPS 97
F+DKRDAEDAL+AMDGR LDGRELRVQMARYGRP S
Sbjct: 65 FYDKRDAEDALEAMDGRKLDGRELRVQMARYGRPTS 100
>gi|195114806|ref|XP_002001958.1| GI17122 [Drosophila mojavensis]
gi|193912533|gb|EDW11400.1| GI17122 [Drosophila mojavensis]
Length = 203
Score = 179 bits (455), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 86/91 (94%), Positives = 91/91 (100%)
Query: 5 RPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFD 64
RPPPRI+GMVSLKVDNLTYRTTP+DLRRVFERCGEVGDIYIPRDR+TRESRGFAFVRF+D
Sbjct: 15 RPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYD 74
Query: 65 KRDAEDALDAMDGRMLDGRELRVQMARYGRP 95
KRDAEDAL+AMDGRMLDGRELRVQMARYGRP
Sbjct: 75 KRDAEDALEAMDGRMLDGRELRVQMARYGRP 105
>gi|426346592|ref|XP_004040960.1| PREDICTED: serine/arginine-rich splicing factor 2 [Gorilla gorilla
gorilla]
Length = 241
Score = 179 bits (453), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 88/112 (78%), Positives = 97/112 (86%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPP +EGM SLKVDNLTYRT+PD LRRVFE+ G VGD+YIPRDR+T+ESRGFAFV
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 61 RFFDKRDAEDALDAMDGRMLDGRELRVQMARYGRPPSSSRSRGGRDRDRRRD 112
RF DKRDAEDA+DAMDG +LDGRELRVQMARYGRPP S SR G + RRD
Sbjct: 61 RFHDKRDAEDAMDAMDGAVLDGRELRVQMARYGRPPDSHHSRRGGNGVWRRD 112
>gi|410925942|ref|XP_003976438.1| PREDICTED: uncharacterized protein LOC101074667 [Takifugu rubripes]
Length = 225
Score = 179 bits (453), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 87/117 (74%), Positives = 98/117 (83%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
M+YGRPPP +EGMVSLKVDNLTYRT P+ LRRVFE+ G VGD+YIPRDR+T+ESRGFAFV
Sbjct: 1 MNYGRPPPDVEGMVSLKVDNLTYRTAPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 61 RFFDKRDAEDALDAMDGRMLDGRELRVQMARYGRPPSSSRSRGGRDRDRRRDRSRSR 117
RFFDKRDAEDA+DAMDG +LDGRELRVQMARYGRPP S G R ++ RSR
Sbjct: 61 RFFDKRDAEDAMDAMDGALLDGRELRVQMARYGRPPDSHYGGGRRGPPKKHSGRRSR 117
>gi|226423972|gb|ACO53091.1| MIP01221p [Drosophila melanogaster]
Length = 195
Score = 178 bits (452), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 85/89 (95%), Positives = 89/89 (100%)
Query: 5 RPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFD 64
RPPPRI+GMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDR+TRESRGFAFVRF+D
Sbjct: 14 RPPPRIDGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYD 73
Query: 65 KRDAEDALDAMDGRMLDGRELRVQMARYG 93
KRDAEDAL+AMDGRMLDGRELRVQMARYG
Sbjct: 74 KRDAEDALEAMDGRMLDGRELRVQMARYG 102
>gi|224074970|ref|XP_002194754.1| PREDICTED: serine/arginine-rich splicing factor 2 [Taeniopygia
guttata]
Length = 221
Score = 178 bits (452), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 85/104 (81%), Positives = 93/104 (89%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPP +EGM SLKVDNLTYRT+PD LRRVFE+ G VGD+YIPRDR+T+ESRGFAFV
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 61 RFFDKRDAEDALDAMDGRMLDGRELRVQMARYGRPPSSSRSRGG 104
RF DKRDAEDA+DAMDG +LDGRELRVQMARYGRPP S SR G
Sbjct: 61 RFHDKRDAEDAMDAMDGAVLDGRELRVQMARYGRPPDSHHSRRG 104
>gi|47604918|ref|NP_001001305.1| serine/arginine-rich splicing factor 2 [Gallus gallus]
gi|266991|sp|P30352.1|SRSF2_CHICK RecName: Full=Serine/arginine-rich splicing factor 2; AltName:
Full=Protein PR264; AltName: Full=Splicing component, 35
kDa; AltName: Full=Splicing factor SC35; Short=SC-35;
AltName: Full=Splicing factor, arginine/serine-rich 2
gi|63752|emb|CAA44306.1| PR 264 [Gallus gallus]
gi|228503|prf||1805195A RNA-binding protein PR264
Length = 221
Score = 178 bits (451), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 85/104 (81%), Positives = 93/104 (89%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPP +EGM SLKVDNLTYRT+PD LRRVFE+ G VGD+YIPRDR+T+ESRGFAFV
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 61 RFFDKRDAEDALDAMDGRMLDGRELRVQMARYGRPPSSSRSRGG 104
RF DKRDAEDA+DAMDG +LDGRELRVQMARYGRPP S SR G
Sbjct: 61 RFHDKRDAEDAMDAMDGAVLDGRELRVQMARYGRPPDSHHSRRG 104
>gi|387018630|gb|AFJ51433.1| Serine/arginine-rich splicing factor 2 [Crotalus adamanteus]
Length = 221
Score = 178 bits (451), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 85/104 (81%), Positives = 93/104 (89%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPP +EGM SLKVDNLTYRT+PD LRRVFE+ G VGD+YIPRDR+T+ESRGFAFV
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 61 RFFDKRDAEDALDAMDGRMLDGRELRVQMARYGRPPSSSRSRGG 104
RF DKRDAEDA+DAMDG +LDGRELRVQMARYGRPP S SR G
Sbjct: 61 RFHDKRDAEDAMDAMDGAVLDGRELRVQMARYGRPPDSHHSRRG 104
>gi|195351055|ref|XP_002042052.1| GM26218 [Drosophila sechellia]
gi|195578745|ref|XP_002079224.1| GD22120 [Drosophila simulans]
gi|194123876|gb|EDW45919.1| GM26218 [Drosophila sechellia]
gi|194191233|gb|EDX04809.1| GD22120 [Drosophila simulans]
Length = 195
Score = 177 bits (450), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 84/89 (94%), Positives = 89/89 (100%)
Query: 5 RPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFD 64
RPPPRI+GMVSLKVDNLTYRTTP+DLRRVFERCGEVGDIYIPRDR+TRESRGFAFVRF+D
Sbjct: 14 RPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYD 73
Query: 65 KRDAEDALDAMDGRMLDGRELRVQMARYG 93
KRDAEDAL+AMDGRMLDGRELRVQMARYG
Sbjct: 74 KRDAEDALEAMDGRMLDGRELRVQMARYG 102
>gi|21358099|ref|NP_652612.1| SC35, isoform B [Drosophila melanogaster]
gi|320545008|ref|NP_001188794.1| SC35, isoform C [Drosophila melanogaster]
gi|386769542|ref|NP_001246005.1| SC35, isoform D [Drosophila melanogaster]
gi|7243688|gb|AAF43415.1|AF232775_1 SR family splicing factor SC35 [Drosophila melanogaster]
gi|7297948|gb|AAF53192.1| SC35, isoform B [Drosophila melanogaster]
gi|17862504|gb|AAL39729.1| LD32469p [Drosophila melanogaster]
gi|220944588|gb|ACL84837.1| SC35-PA [synthetic construct]
gi|220954528|gb|ACL89807.1| SC35-PA [synthetic construct]
gi|318068433|gb|ADV37044.1| SC35, isoform C [Drosophila melanogaster]
gi|383291463|gb|AFH03679.1| SC35, isoform D [Drosophila melanogaster]
Length = 195
Score = 177 bits (449), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 84/89 (94%), Positives = 89/89 (100%)
Query: 5 RPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFD 64
RPPPRI+GMVSLKVDNLTYRTTP+DLRRVFERCGEVGDIYIPRDR+TRESRGFAFVRF+D
Sbjct: 14 RPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYD 73
Query: 65 KRDAEDALDAMDGRMLDGRELRVQMARYG 93
KRDAEDAL+AMDGRMLDGRELRVQMARYG
Sbjct: 74 KRDAEDALEAMDGRMLDGRELRVQMARYG 102
>gi|26345390|dbj|BAC36346.1| unnamed protein product [Mus musculus]
Length = 254
Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 82/98 (83%), Positives = 90/98 (91%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPP +EGM SLKVDNLTYRT+PD LRRVFE+ G VGD+YIPRDR+T+ESRGFAFV
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 61 RFFDKRDAEDALDAMDGRMLDGRELRVQMARYGRPPSS 98
RF DKRDAEDA+DAMDG +LDGRELRVQMARYGRPP S
Sbjct: 61 RFHDKRDAEDAMDAMDGAVLDGRELRVQMARYGRPPDS 98
>gi|426346596|ref|XP_004040962.1| PREDICTED: serine/arginine-rich splicing factor 2 [Gorilla gorilla
gorilla]
Length = 221
Score = 176 bits (447), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 85/104 (81%), Positives = 93/104 (89%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPP +EGM SLKVDNLTYRT+PD LRRVFE+ G VGD+YIPRDR+T+ESRGFAFV
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 61 RFFDKRDAEDALDAMDGRMLDGRELRVQMARYGRPPSSSRSRGG 104
RF DKRDAEDA+DAMDG +LDGRELRVQMARYGRPP S SR G
Sbjct: 61 RFHDKRDAEDAMDAMDGAVLDGRELRVQMARYGRPPDSHHSRRG 104
>gi|426346594|ref|XP_004040961.1| PREDICTED: serine/arginine-rich splicing factor 2 [Gorilla gorilla
gorilla]
Length = 219
Score = 176 bits (446), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 85/104 (81%), Positives = 93/104 (89%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPP +EGM SLKVDNLTYRT+PD LRRVFE+ G VGD+YIPRDR+T+ESRGFAFV
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 61 RFFDKRDAEDALDAMDGRMLDGRELRVQMARYGRPPSSSRSRGG 104
RF DKRDAEDA+DAMDG +LDGRELRVQMARYGRPP S SR G
Sbjct: 61 RFHDKRDAEDAMDAMDGAVLDGRELRVQMARYGRPPDSHHSRRG 104
>gi|194861231|ref|XP_001969737.1| GG10262 [Drosophila erecta]
gi|190661604|gb|EDV58796.1| GG10262 [Drosophila erecta]
Length = 195
Score = 176 bits (446), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 84/89 (94%), Positives = 89/89 (100%)
Query: 5 RPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFD 64
RPPPRI+GMVSLKVDNLTYRTTP+DLRRVFERCGEVGDIYIPRDR+TRESRGFAFVRF+D
Sbjct: 14 RPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYD 73
Query: 65 KRDAEDALDAMDGRMLDGRELRVQMARYG 93
KRDAEDAL+AMDGRMLDGRELRVQMARYG
Sbjct: 74 KRDAEDALEAMDGRMLDGRELRVQMARYG 102
>gi|355718912|gb|AES06428.1| splicing factor, arginine/serine-rich 2 [Mustela putorius furo]
Length = 108
Score = 176 bits (446), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 85/104 (81%), Positives = 93/104 (89%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPP +EGM SLKVDNLTYRT+PD LRRVFE+ G VGD+YIPRDR+T+ESRGFAFV
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 61 RFFDKRDAEDALDAMDGRMLDGRELRVQMARYGRPPSSSRSRGG 104
RF DKRDAEDA+DAMDG +LDGRELRVQMARYGRPP S SR G
Sbjct: 61 RFHDKRDAEDAMDAMDGAVLDGRELRVQMARYGRPPDSHHSRRG 104
>gi|327264866|ref|XP_003217232.1| PREDICTED: serine/arginine-rich splicing factor 2-like [Anolis
carolinensis]
Length = 221
Score = 176 bits (445), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 85/104 (81%), Positives = 93/104 (89%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPP +EGM SLKVDNLTYRT+PD LRRVFE+ G VGD+YIPRDR+T+ESRGFAFV
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 61 RFFDKRDAEDALDAMDGRMLDGRELRVQMARYGRPPSSSRSRGG 104
RF DKRDAEDA+DAMDG +LDGRELRVQMARYGRPP S SR G
Sbjct: 61 RFHDKRDAEDAMDAMDGAVLDGRELRVQMARYGRPPDSHHSRRG 104
>gi|432949878|ref|XP_004084303.1| PREDICTED: uncharacterized protein LOC100049528 [Oryzias latipes]
Length = 239
Score = 176 bits (445), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 84/104 (80%), Positives = 94/104 (90%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPP +EGM SLKVDNLTYRT+P+ LRRVFE+ G VGD+YIPRDR+++ESRGFAFV
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYSKESRGFAFV 60
Query: 61 RFFDKRDAEDALDAMDGRMLDGRELRVQMARYGRPPSSSRSRGG 104
RFFDKRDAEDA+DAMDG +LDGRELRVQMARYGRPP S SR G
Sbjct: 61 RFFDKRDAEDAMDAMDGALLDGRELRVQMARYGRPPDSMYSRRG 104
>gi|358009411|pdb|2LEA|A Chain A, Solution Structure Of Human Srsf2 (Sc35) Rrm
gi|358009412|pdb|2LEB|A Chain A, Solution Structure Of Human Srsf2 (Sc35) Rrm In Complex
With 5'- Uccagu-3'
gi|358009414|pdb|2LEC|A Chain A, Solution Structure Of Human Srsf2 (Sc35) Rrm In Complex
With 5'- Uggagu-3'
Length = 135
Score = 176 bits (445), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 83/101 (82%), Positives = 91/101 (90%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPP +EGM SLKVDNLTYRT+PD LRRVFE+ G VGD+YIPRDR+T+ESRGFAFV
Sbjct: 35 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 94
Query: 61 RFFDKRDAEDALDAMDGRMLDGRELRVQMARYGRPPSSSRS 101
RF DKRDAEDA+DAMDG +LDGRELRVQMARYGRPP S S
Sbjct: 95 RFHDKRDAEDAMDAMDGAVLDGRELRVQMARYGRPPDSHHS 135
>gi|47087067|ref|NP_998547.1| splicing factor, arginine/serine-rich 2 [Danio rerio]
gi|28279759|gb|AAH46045.1| Splicing factor, arginine/serine-rich 2 [Danio rerio]
Length = 225
Score = 175 bits (444), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 83/104 (79%), Positives = 93/104 (89%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPP +EGM SLKVDNLTYRT+P+ LRRVFE+ G VGD+YIPRDR+T+ESRGFAFV
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 61 RFFDKRDAEDALDAMDGRMLDGRELRVQMARYGRPPSSSRSRGG 104
RF DKRDAEDA+DAMDG +LDGRELRVQMARYGRPP + SR G
Sbjct: 61 RFHDKRDAEDAMDAMDGALLDGRELRVQMARYGRPPDAHYSRRG 104
>gi|348544446|ref|XP_003459692.1| PREDICTED: hypothetical protein LOC100710640 [Oreochromis
niloticus]
Length = 227
Score = 175 bits (443), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 84/104 (80%), Positives = 93/104 (89%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPP +EGM SLKVDNLTYRT+P+ LRRVFE+ G VGD+YIPRDR+T+ESRGFAFV
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 61 RFFDKRDAEDALDAMDGRMLDGRELRVQMARYGRPPSSSRSRGG 104
RF DKRDAEDA+DAMDG +LDGRELRVQMARYGRPP S SR G
Sbjct: 61 RFLDKRDAEDAMDAMDGALLDGRELRVQMARYGRPPDSMYSRRG 104
>gi|77627748|ref|NP_001029290.1| serine/arginine-rich splicing factor 2 [Pan troglodytes]
gi|60414777|sp|Q5R1W5.3|SRSF2_PANTR RecName: Full=Serine/arginine-rich splicing factor 2; AltName:
Full=Splicing component, 35 kDa; AltName: Full=Splicing
factor SC35; Short=SC-35; AltName: Full=Splicing
factor, arginine/serine-rich 2
gi|56342346|dbj|BAD74033.1| arginine/serine-rich 2 splicing factor [Pan troglodytes verus]
Length = 221
Score = 175 bits (443), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 82/98 (83%), Positives = 90/98 (91%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPP +EGM SLKVDNLTYRT+PD LRRVFE+ G VGD+YIPRDR+T+ESRGFAFV
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 61 RFFDKRDAEDALDAMDGRMLDGRELRVQMARYGRPPSS 98
RF DKRDAEDA+DAMDG +LDGRELRVQMARYGRPP S
Sbjct: 61 RFHDKRDAEDAMDAMDGAVLDGRELRVQMARYGRPPDS 98
>gi|359320233|ref|XP_003639286.1| PREDICTED: serine/arginine-rich splicing factor 2-like isoform 1
[Canis lupus familiaris]
gi|359320235|ref|XP_003639287.1| PREDICTED: serine/arginine-rich splicing factor 2-like isoform 2
[Canis lupus familiaris]
Length = 221
Score = 175 bits (443), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 83/101 (82%), Positives = 91/101 (90%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPP +EGM SLKVDNLTYRT+PD LRRVFE+ G VGD+YIPRDR+T+ESRGFAFV
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 61 RFFDKRDAEDALDAMDGRMLDGRELRVQMARYGRPPSSSRS 101
RF DKRDAEDA+DAMDG +LDGRELRVQMARYGRPP S S
Sbjct: 61 RFHDKRDAEDAMDAMDGAVLDGRELRVQMARYGRPPDSHHS 101
>gi|62898065|dbj|BAD96972.1| splicing factor, arginine/serine-rich 2 variant [Homo sapiens]
Length = 221
Score = 175 bits (443), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 82/98 (83%), Positives = 90/98 (91%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPP +EGM SLKVDNLTYRT+PD LRRVFE+ G VGD+YIPRDR+T+ESRGFAFV
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 61 RFFDKRDAEDALDAMDGRMLDGRELRVQMARYGRPPSS 98
RF DKRDAEDA+DAMDG +LDGRELRVQMARYGRPP S
Sbjct: 61 RFHDKRDAEDAMDAMDGAVLDGRELRVQMARYGRPPDS 98
>gi|148702654|gb|EDL34601.1| splicing factor, arginine/serine-rich 2 (SC-35), isoform CRA_a [Mus
musculus]
Length = 241
Score = 174 bits (442), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 82/100 (82%), Positives = 90/100 (90%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPP +EGM SLKVDNLTYRT+PD LRRVFE+ G VGD+YIPRDR+T+ESRGFAFV
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 61 RFFDKRDAEDALDAMDGRMLDGRELRVQMARYGRPPSSSR 100
RF DKRDAEDA+DAMDG +LDGRELRVQMARYGRPP S
Sbjct: 61 RFHDKRDAEDAMDAMDGAVLDGRELRVQMARYGRPPDSHH 100
>gi|397494985|ref|XP_003818346.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 3 [Pan
paniscus]
gi|119609854|gb|EAW89448.1| splicing factor, arginine/serine-rich 2, isoform CRA_g [Homo
sapiens]
gi|194387574|dbj|BAG60151.1| unnamed protein product [Homo sapiens]
Length = 209
Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 82/100 (82%), Positives = 90/100 (90%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPP +EGM SLKVDNLTYRT+PD LRRVFE+ G VGD+YIPRDR+T+ESRGFAFV
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 61 RFFDKRDAEDALDAMDGRMLDGRELRVQMARYGRPPSSSR 100
RF DKRDAEDA+DAMDG +LDGRELRVQMARYGRPP S
Sbjct: 61 RFHDKRDAEDAMDAMDGAVLDGRELRVQMARYGRPPDSHH 100
>gi|317419577|emb|CBN81614.1| Splicing factor, arginine/serine-rich 2 [Dicentrarchus labrax]
Length = 228
Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 84/104 (80%), Positives = 93/104 (89%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPP +EGM SLKVDNLTYRT+P+ LRRVFE+ G VGD+YIPRDR+T+ESRGFAFV
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 61 RFFDKRDAEDALDAMDGRMLDGRELRVQMARYGRPPSSSRSRGG 104
RF DKRDAEDA+DAMDG +LDGRELRVQMARYGRPP S SR G
Sbjct: 61 RFLDKRDAEDAMDAMDGALLDGRELRVQMARYGRPPDSMYSRRG 104
>gi|410929633|ref|XP_003978204.1| PREDICTED: uncharacterized protein LOC101070858 [Takifugu rubripes]
Length = 229
Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 83/102 (81%), Positives = 92/102 (90%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPP +EGM SLKVDNLTYRT+P+ LRRVFE+ G VGD+YIPRDR+T+ESRGFAFV
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 61 RFFDKRDAEDALDAMDGRMLDGRELRVQMARYGRPPSSSRSR 102
RF DKRDAEDA+DAMDG +LDGRELRVQMARYGRPP S SR
Sbjct: 61 RFLDKRDAEDAMDAMDGALLDGRELRVQMARYGRPPDSMYSR 102
>gi|116175283|ref|NP_001070697.1| serine/arginine-rich splicing factor 2 [Sus scrofa]
gi|122131841|sp|Q06A98.1|SRSF2_PIG RecName: Full=Serine/arginine-rich splicing factor 2; AltName:
Full=Splicing component, 35 kDa; AltName: Full=Splicing
factor SC35; Short=SC-35; AltName: Full=Splicing factor,
arginine/serine-rich 2
gi|115371755|gb|ABI96202.1| SFRS2 [Sus scrofa]
Length = 221
Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 82/100 (82%), Positives = 90/100 (90%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPP +EGM SLKVDNLTYRT+PD LRRVFE+ G VGD+YIPRDR+T+ESRGFAFV
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 61 RFFDKRDAEDALDAMDGRMLDGRELRVQMARYGRPPSSSR 100
RF DKRDAEDA+DAMDG +LDGRELRVQMARYGRPP S
Sbjct: 61 RFHDKRDAEDAMDAMDGAVLDGRELRVQMARYGRPPDSHH 100
>gi|45361503|ref|NP_989328.1| serine/arginine-rich splicing factor 2 [Xenopus (Silurana)
tropicalis]
gi|39794351|gb|AAH64167.1| splicing factor, arginine/serine-rich 2 [Xenopus (Silurana)
tropicalis]
gi|89272888|emb|CAJ82901.1| splicing factor, arginine/serine-rich 2 [Xenopus (Silurana)
tropicalis]
Length = 220
Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 83/104 (79%), Positives = 92/104 (88%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPP +EGM SLKVDNLTYRT+P+ LRRVFE+ G VGD+YIPRDR+T+ESRGFAFV
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 61 RFFDKRDAEDALDAMDGRMLDGRELRVQMARYGRPPSSSRSRGG 104
RF DKRDAEDA+DAMDG +LDGRELRVQMARYGRPP S R G
Sbjct: 61 RFHDKRDAEDAMDAMDGAVLDGRELRVQMARYGRPPDSHHGRRG 104
>gi|223647184|gb|ACN10350.1| Splicing factor, arginine/serine-rich 2 [Salmo salar]
gi|223673057|gb|ACN12710.1| Splicing factor, arginine/serine-rich 2 [Salmo salar]
Length = 212
Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 80/98 (81%), Positives = 90/98 (91%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPP +EGM SLKVDNLTYRT+P+ LRRVFE+ G VGD+YIPRDR+T+ESRGF+FV
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFSFV 60
Query: 61 RFFDKRDAEDALDAMDGRMLDGRELRVQMARYGRPPSS 98
RF DKRDAEDA+DAMDG +LDGRELRVQMARYGRPP S
Sbjct: 61 RFHDKRDAEDAMDAMDGAVLDGRELRVQMARYGRPPDS 98
>gi|297701877|ref|XP_002827924.1| PREDICTED: uncharacterized protein LOC100439801 isoform 2 [Pongo
abelii]
Length = 287
Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 82/98 (83%), Positives = 90/98 (91%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPP +EGM SLKVDNLTYRT+PD LRRVFE+ G VGD+YIPRDR+T+ESRGFAFV
Sbjct: 67 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 126
Query: 61 RFFDKRDAEDALDAMDGRMLDGRELRVQMARYGRPPSS 98
RF DKRDAEDA+DAMDG +LDGRELRVQMARYGRPP S
Sbjct: 127 RFHDKRDAEDAMDAMDGAVLDGRELRVQMARYGRPPDS 164
>gi|148230060|ref|NP_001080743.1| serine/arginine-rich splicing factor 2 [Xenopus laevis]
gi|28175397|gb|AAH45229.1| Sfrs2-prov protein [Xenopus laevis]
Length = 215
Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 83/104 (79%), Positives = 92/104 (88%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPP +EGM SLKVDNLTYRT+P+ LRRVFE+ G VGD+YIPRDR+T+ESRGFAFV
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 61 RFFDKRDAEDALDAMDGRMLDGRELRVQMARYGRPPSSSRSRGG 104
RF DKRDAEDA+DAMDG +LDGRELRVQMARYGRPP S R G
Sbjct: 61 RFHDKRDAEDAMDAMDGAVLDGRELRVQMARYGRPPDSHHGRRG 104
>gi|426346598|ref|XP_004040963.1| PREDICTED: serine/arginine-rich splicing factor 2 [Gorilla gorilla
gorilla]
Length = 206
Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 82/100 (82%), Positives = 90/100 (90%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPP +EGM SLKVDNLTYRT+PD LRRVFE+ G VGD+YIPRDR+T+ESRGFAFV
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 61 RFFDKRDAEDALDAMDGRMLDGRELRVQMARYGRPPSSSR 100
RF DKRDAEDA+DAMDG +LDGRELRVQMARYGRPP S
Sbjct: 61 RFHDKRDAEDAMDAMDGAVLDGRELRVQMARYGRPPDSHH 100
>gi|332260181|ref|XP_003279164.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 2 [Nomascus leucogenys]
Length = 221
Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 82/100 (82%), Positives = 90/100 (90%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPP +EGM SLKVDNLTYRT+PD LRRVFE+ G VGD+YIPRDR+T+ESRGFAFV
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 61 RFFDKRDAEDALDAMDGRMLDGRELRVQMARYGRPPSSSR 100
RF DKRDAEDA+DAMDG +LDGRELRVQMARYGRPP S
Sbjct: 61 RFHDKRDAEDAMDAMDGAVLDGRELRVQMARYGRPPDSHH 100
>gi|6755478|ref|NP_035488.1| serine/arginine-rich splicing factor 2 [Mus musculus]
gi|47271443|ref|NP_003007.2| serine/arginine-rich splicing factor 2 [Homo sapiens]
gi|57528425|ref|NP_001009720.1| serine/arginine-rich splicing factor 2 [Rattus norvegicus]
gi|77735589|ref|NP_001029490.1| serine/arginine-rich splicing factor 2 [Bos taurus]
gi|299758481|ref|NP_001177668.1| splicing factor, arginine/serine-rich 2 [Macaca mulatta]
gi|306482646|ref|NP_001182356.1| serine/arginine-rich splicing factor 2 [Homo sapiens]
gi|126308709|ref|XP_001371367.1| PREDICTED: serine/arginine-rich splicing factor 2-like [Monodelphis
domestica]
gi|296203283|ref|XP_002748811.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 1
[Callithrix jacchus]
gi|395825870|ref|XP_003786143.1| PREDICTED: serine/arginine-rich splicing factor 2 [Otolemur
garnettii]
gi|397494981|ref|XP_003818344.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 1 [Pan
paniscus]
gi|397494983|ref|XP_003818345.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 2 [Pan
paniscus]
gi|402901195|ref|XP_003913541.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 1 [Papio
anubis]
gi|402901197|ref|XP_003913542.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 2 [Papio
anubis]
gi|402901199|ref|XP_003913543.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 3 [Papio
anubis]
gi|402901201|ref|XP_003913544.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 4 [Papio
anubis]
gi|18280933|sp|Q62093.4|SRSF2_MOUSE RecName: Full=Serine/arginine-rich splicing factor 2; AltName:
Full=Protein PR264; AltName: Full=Putative myelin
regulatory factor 1; Short=MRF-1; AltName: Full=Splicing
component, 35 kDa; AltName: Full=Splicing factor SC35;
Short=SC-35; AltName: Full=Splicing factor,
arginine/serine-rich 2
gi|52783335|sp|Q6PDU1.3|SRSF2_RAT RecName: Full=Serine/arginine-rich splicing factor 2; AltName:
Full=Splicing component, 35 kDa; AltName: Full=Splicing
factor SC35; Short=SC-35; AltName: Full=Splicing factor,
arginine/serine-rich 2
gi|60416437|sp|Q01130.4|SRSF2_HUMAN RecName: Full=Serine/arginine-rich splicing factor 2; AltName:
Full=Protein PR264; AltName: Full=Splicing component, 35
kDa; AltName: Full=Splicing factor SC35; Short=SC-35;
AltName: Full=Splicing factor, arginine/serine-rich 2
gi|110287957|sp|Q3MHR5.3|SRSF2_BOVIN RecName: Full=Serine/arginine-rich splicing factor 2; AltName:
Full=Splicing component, 35 kDa; AltName: Full=Splicing
factor SC35; Short=SC-35; AltName: Full=Splicing factor,
arginine/serine-rich 2
gi|539663|pir||A42701 splicing factor SFRS2 - human
gi|35597|emb|CAA44307.1| PR 264 [Homo sapiens]
gi|455419|emb|CAA53383.1| PR264/SC35 [Homo sapiens]
gi|3335676|gb|AAC71000.1| splicing factor SC35 [Mus musculus]
gi|12653143|gb|AAH00339.1| SFRS2 protein [Homo sapiens]
gi|12654915|gb|AAH01303.1| SFRS2 protein [Homo sapiens]
gi|13529557|gb|AAH05493.1| Sfrs2 protein [Mus musculus]
gi|26351947|dbj|BAC39610.1| unnamed protein product [Mus musculus]
gi|26352962|dbj|BAC40111.1| unnamed protein product [Mus musculus]
gi|30583339|gb|AAP35914.1| splicing factor, arginine/serine-rich 2 [Homo sapiens]
gi|34849641|gb|AAH58508.1| Splicing factor, arginine/serine-rich 2 [Rattus norvegicus]
gi|47123339|gb|AAH70086.1| Splicing factor, arginine/serine-rich 2 [Homo sapiens]
gi|61359244|gb|AAX41688.1| splicing factor arginine/serine-rich 2 [synthetic construct]
gi|67969334|dbj|BAE01019.1| unnamed protein product [Macaca fascicularis]
gi|74227066|dbj|BAE38330.1| unnamed protein product [Mus musculus]
gi|75775273|gb|AAI05139.1| Splicing factor, arginine/serine-rich 2 [Bos taurus]
gi|90076288|dbj|BAE87824.1| unnamed protein product [Macaca fascicularis]
gi|119609845|gb|EAW89439.1| splicing factor, arginine/serine-rich 2, isoform CRA_a [Homo
sapiens]
gi|119609846|gb|EAW89440.1| splicing factor, arginine/serine-rich 2, isoform CRA_a [Homo
sapiens]
gi|119609851|gb|EAW89445.1| splicing factor, arginine/serine-rich 2, isoform CRA_a [Homo
sapiens]
gi|119609853|gb|EAW89447.1| splicing factor, arginine/serine-rich 2, isoform CRA_a [Homo
sapiens]
gi|123980614|gb|ABM82136.1| splicing factor, arginine/serine-rich 2 [synthetic construct]
gi|123995435|gb|ABM85319.1| splicing factor, arginine/serine-rich 2 [synthetic construct]
gi|148702655|gb|EDL34602.1| splicing factor, arginine/serine-rich 2 (SC-35), isoform CRA_b [Mus
musculus]
gi|148702656|gb|EDL34603.1| splicing factor, arginine/serine-rich 2 (SC-35), isoform CRA_b [Mus
musculus]
gi|149054884|gb|EDM06701.1| similar to splicing factor, arginine/serine-rich 2, isoform CRA_a
[Rattus norvegicus]
gi|149054885|gb|EDM06702.1| similar to splicing factor, arginine/serine-rich 2, isoform CRA_a
[Rattus norvegicus]
gi|149054887|gb|EDM06704.1| similar to splicing factor, arginine/serine-rich 2, isoform CRA_a
[Rattus norvegicus]
gi|168277776|dbj|BAG10866.1| splicing factor, arginine/serine-rich 2 [synthetic construct]
gi|193784944|dbj|BAG54097.1| unnamed protein product [Homo sapiens]
gi|296476083|tpg|DAA18198.1| TPA: splicing factor, arginine/serine-rich 2 [Bos taurus]
gi|380782971|gb|AFE63361.1| serine/arginine-rich splicing factor 2 [Macaca mulatta]
gi|380815556|gb|AFE79652.1| serine/arginine-rich splicing factor 2 [Macaca mulatta]
gi|384941848|gb|AFI34529.1| serine/arginine-rich splicing factor 2 [Macaca mulatta]
gi|384948766|gb|AFI37988.1| serine/arginine-rich splicing factor 2 [Macaca mulatta]
gi|410226692|gb|JAA10565.1| serine/arginine-rich splicing factor 2 [Pan troglodytes]
gi|410226694|gb|JAA10566.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
gi|410262826|gb|JAA19379.1| serine/arginine-rich splicing factor 2 [Pan troglodytes]
gi|410262828|gb|JAA19380.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
gi|410299756|gb|JAA28478.1| serine/arginine-rich splicing factor 2 [Pan troglodytes]
gi|410299760|gb|JAA28480.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
gi|410299766|gb|JAA28483.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
gi|410338225|gb|JAA38059.1| serine/arginine-rich splicing factor 2 [Pan troglodytes]
gi|410338227|gb|JAA38060.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
gi|410338229|gb|JAA38061.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
gi|410338231|gb|JAA38062.1| serine/arginine-rich splicing factor 2 [Pan troglodytes]
gi|410338233|gb|JAA38063.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
gi|228504|prf||1805195B RNA-binding protein PR264
Length = 221
Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 82/100 (82%), Positives = 90/100 (90%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPP +EGM SLKVDNLTYRT+PD LRRVFE+ G VGD+YIPRDR+T+ESRGFAFV
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 61 RFFDKRDAEDALDAMDGRMLDGRELRVQMARYGRPPSSSR 100
RF DKRDAEDA+DAMDG +LDGRELRVQMARYGRPP S
Sbjct: 61 RFHDKRDAEDAMDAMDGAVLDGRELRVQMARYGRPPDSHH 100
>gi|221219380|gb|ACM08351.1| Splicing factor, arginine/serine-rich 2 [Salmo salar]
gi|223647188|gb|ACN10352.1| Splicing factor, arginine/serine-rich 2 [Salmo salar]
gi|223673061|gb|ACN12712.1| Splicing factor, arginine/serine-rich 2 [Salmo salar]
Length = 212
Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 80/98 (81%), Positives = 90/98 (91%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPP +EGM SLKVDNLTYRT+P+ LRRVFE+ G VGD+YIPRDR+T+ESRGF+FV
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFSFV 60
Query: 61 RFFDKRDAEDALDAMDGRMLDGRELRVQMARYGRPPSS 98
RF DKRDAEDA+DAMDG +LDGRELRVQMARYGRPP S
Sbjct: 61 RFHDKRDAEDAMDAMDGAVLDGRELRVQMARYGRPPDS 98
>gi|149478364|ref|XP_001514814.1| PREDICTED: serine/arginine-rich splicing factor 2-like, partial
[Ornithorhynchus anatinus]
Length = 120
Score = 173 bits (438), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 82/100 (82%), Positives = 90/100 (90%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPP +EGM SLKVDNLTYRT+PD LRRVFE+ G VGD+YIPRDR+T+ESRGFAFV
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 61 RFFDKRDAEDALDAMDGRMLDGRELRVQMARYGRPPSSSR 100
RF DKRDAEDA+DAMDG +LDGRELRVQMARYGRPP S
Sbjct: 61 RFHDKRDAEDAMDAMDGAVLDGRELRVQMARYGRPPDSHH 100
>gi|1405747|emb|CAA67134.1| PR264/SC35 [Mus musculus]
Length = 121
Score = 173 bits (438), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 82/100 (82%), Positives = 90/100 (90%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPP +EGM SLKVDNLTYRT+PD LRRVFE+ G VGD+YIPRDR+T+ESRGFAFV
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 61 RFFDKRDAEDALDAMDGRMLDGRELRVQMARYGRPPSSSR 100
RF DKRDAEDA+DAMDG +LDGRELRVQMARYGRPP S
Sbjct: 61 RFHDKRDAEDAMDAMDGAVLDGRELRVQMARYGRPPDSHH 100
>gi|41946787|gb|AAH65971.1| Zgc:55876 protein [Danio rerio]
Length = 220
Score = 173 bits (438), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 80/98 (81%), Positives = 90/98 (91%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPP ++GM SLKVDNLTYRT+P+ LRRVFE+ G VGD+YIPRDR+T+ESRGFAFV
Sbjct: 1 MSYGRPPPDVDGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 61 RFFDKRDAEDALDAMDGRMLDGRELRVQMARYGRPPSS 98
RF DKRDAEDA+DAMDG +LDGRELRVQMARYGRPP S
Sbjct: 61 RFHDKRDAEDAMDAMDGAILDGRELRVQMARYGRPPDS 98
>gi|348509946|ref|XP_003442507.1| PREDICTED: serine/arginine-rich splicing factor 2-like
[Oreochromis niloticus]
Length = 218
Score = 173 bits (438), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 80/98 (81%), Positives = 90/98 (91%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPP ++GM SLKVDNLTYRT+P+ LRRVFE+ G VGD+YIPRDR+T+ESRGFAFV
Sbjct: 1 MSYGRPPPDVDGMTSLKVDNLTYRTSPEALRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 61 RFFDKRDAEDALDAMDGRMLDGRELRVQMARYGRPPSS 98
RF DKRDAEDA+DAMDG +LDGRELRVQMARYGRPP S
Sbjct: 61 RFHDKRDAEDAMDAMDGALLDGRELRVQMARYGRPPDS 98
>gi|209736008|gb|ACI68873.1| Splicing factor, arginine/serine-rich 2 [Salmo salar]
Length = 222
Score = 173 bits (438), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 80/98 (81%), Positives = 90/98 (91%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPP +EGM SLKVDNLTYRT+P+ LRRVFE+ G VGD+YIPRDR+T+ESRGF+FV
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFSFV 60
Query: 61 RFFDKRDAEDALDAMDGRMLDGRELRVQMARYGRPPSS 98
RF DKRDAEDA+DAMDG +LDGRELRVQMARYGRPP S
Sbjct: 61 RFHDKRDAEDAMDAMDGAVLDGRELRVQMARYGRPPDS 98
>gi|41054475|ref|NP_955945.1| serine/arginine-rich splicing factor 2b [Danio rerio]
gi|28278933|gb|AAH45480.1| Zgc:55876 [Danio rerio]
Length = 218
Score = 172 bits (437), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 80/98 (81%), Positives = 90/98 (91%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPP ++GM SLKVDNLTYRT+P+ LRRVFE+ G VGD+YIPRDR+T+ESRGFAFV
Sbjct: 1 MSYGRPPPDVDGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 61 RFFDKRDAEDALDAMDGRMLDGRELRVQMARYGRPPSS 98
RF DKRDAEDA+DAMDG +LDGRELRVQMARYGRPP S
Sbjct: 61 RFHDKRDAEDAMDAMDGAILDGRELRVQMARYGRPPDS 98
>gi|90076648|dbj|BAE88004.1| unnamed protein product [Macaca fascicularis]
Length = 210
Score = 172 bits (437), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 82/100 (82%), Positives = 90/100 (90%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPP +EGM SLKVDNLTYRT+PD LRRVFE+ G VGD+YIPRDR+T+ESRGFAFV
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 61 RFFDKRDAEDALDAMDGRMLDGRELRVQMARYGRPPSSSR 100
RF DKRDAEDA+DAMDG +LDGRELRVQMARYGRPP S
Sbjct: 61 RFHDKRDAEDAMDAMDGAVLDGRELRVQMARYGRPPDSHH 100
>gi|193784791|dbj|BAG53944.1| unnamed protein product [Homo sapiens]
Length = 195
Score = 171 bits (434), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 81/100 (81%), Positives = 89/100 (89%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPP +EGM SLKVDNLTYRT+PD LRRVFE+ G VGD+YIPRDR+T+ESRGFAFV
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 61 RFFDKRDAEDALDAMDGRMLDGRELRVQMARYGRPPSSSR 100
RF DKRDAEDA+DAMDG +LD RELRVQMARYGRPP S
Sbjct: 61 RFHDKRDAEDAMDAMDGAVLDARELRVQMARYGRPPDSHH 100
>gi|172046472|emb|CAQ34908.1| SR family splicing factor SC35 [Chironomus tentans]
Length = 167
Score = 171 bits (434), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 83/98 (84%), Positives = 90/98 (91%), Gaps = 1/98 (1%)
Query: 1 MSY-GRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAF 59
MSY R PP+IEGM+SLKVDNLTYRTTP+DLRRVFERCG VGDIYIPRDR TRESRGFAF
Sbjct: 1 MSYSARGPPKIEGMISLKVDNLTYRTTPEDLRRVFERCGSVGDIYIPRDRHTRESRGFAF 60
Query: 60 VRFFDKRDAEDALDAMDGRMLDGRELRVQMARYGRPPS 97
VRF++KRDAE+AL MDGR+LDGRELRVQMARYGRP S
Sbjct: 61 VRFYEKRDAEEALQEMDGRVLDGRELRVQMARYGRPTS 98
>gi|403280479|ref|XP_003931745.1| PREDICTED: uncharacterized protein LOC101052045 [Saimiri
boliviensis boliviensis]
Length = 209
Score = 171 bits (434), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 81/96 (84%), Positives = 89/96 (92%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPP +EGM SLKVDNLTYRT+PD LRRVFE+ G VGD+YIPRDR+T+ESRGFAFV
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 61 RFFDKRDAEDALDAMDGRMLDGRELRVQMARYGRPP 96
RF DKRDAEDA+DAMDG +LDGRELRVQMARYGRPP
Sbjct: 61 RFHDKRDAEDAMDAMDGAVLDGRELRVQMARYGRPP 96
>gi|209155586|gb|ACI34025.1| Splicing factor, arginine/serine-rich 2 [Salmo salar]
gi|209732124|gb|ACI66931.1| Splicing factor, arginine/serine-rich 2 [Salmo salar]
Length = 211
Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 80/98 (81%), Positives = 89/98 (90%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPP +EGM SLKVDNLTYRT+P+ LRRVFE+ G VGD+YIPRDR+T+ESRGFAFV
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 61 RFFDKRDAEDALDAMDGRMLDGRELRVQMARYGRPPSS 98
RF D RDAEDA+DAMDG +LDGRELRVQMARYGRPP S
Sbjct: 61 RFHDNRDAEDAMDAMDGALLDGRELRVQMARYGRPPDS 98
>gi|427786359|gb|JAA58631.1| Putative splicing factor sr protein superfamily [Rhipicephalus
pulchellus]
Length = 383
Score = 170 bits (430), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 77/95 (81%), Positives = 87/95 (91%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGR PP I+GM SLKVDNLTYRTTP+DL+RVFER G+VGD+YIPR +TRESRGFAFV
Sbjct: 1 MSYGRAPPTIDGMTSLKVDNLTYRTTPEDLKRVFERYGDVGDVYIPRHPYTRESRGFAFV 60
Query: 61 RFFDKRDAEDALDAMDGRMLDGRELRVQMARYGRP 95
RF+DKRD EDA+DA+DG M+DGRELRVQMARYGRP
Sbjct: 61 RFYDKRDCEDAMDALDGYMMDGRELRVQMARYGRP 95
>gi|337926|gb|AAA60306.1| splicing factor [Homo sapiens]
Length = 221
Score = 169 bits (429), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 81/100 (81%), Positives = 89/100 (89%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPP +EGM SLKVDNLTYRT+PD LRRVFE+ VGD+YIPRDR+T+ESRGFAFV
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYRRVGDVYIPRDRYTKESRGFAFV 60
Query: 61 RFFDKRDAEDALDAMDGRMLDGRELRVQMARYGRPPSSSR 100
RF DKRDAEDA+DAMDG +LDGRELRVQMARYGRPP S
Sbjct: 61 RFHDKRDAEDAMDAMDGAVLDGRELRVQMARYGRPPDSHH 100
>gi|291224278|ref|XP_002732132.1| PREDICTED: splicing factor, arginine/serine-rich 2-like
[Saccoglossus kowalevskii]
Length = 230
Score = 169 bits (428), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 81/95 (85%), Positives = 87/95 (91%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSY R PP IEGM SLKVDNLTYRTTP+DLRR FE+ G+VGD+YIPRDRFTRESRGFAFV
Sbjct: 1 MSYSRGPPEIEGMHSLKVDNLTYRTTPEDLRRCFEKYGDVGDVYIPRDRFTRESRGFAFV 60
Query: 61 RFFDKRDAEDALDAMDGRMLDGRELRVQMARYGRP 95
R++DKRDAEDALDAMDG LDGRELRVQMARYGRP
Sbjct: 61 RYYDKRDAEDALDAMDGATLDGRELRVQMARYGRP 95
>gi|343961547|dbj|BAK62363.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
Length = 221
Score = 169 bits (427), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 81/100 (81%), Positives = 88/100 (88%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPP +EGM SLKVDNLTYRT+PD LRRV E+ G VGD YIPRDR+T+ESRGFAFV
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVSEKYGRVGDAYIPRDRYTKESRGFAFV 60
Query: 61 RFFDKRDAEDALDAMDGRMLDGRELRVQMARYGRPPSSSR 100
RF DKRDAEDA+DAMDG +LDGRELRVQMARYGRPP S
Sbjct: 61 RFHDKRDAEDAMDAMDGAVLDGRELRVQMARYGRPPDSHH 100
>gi|395533366|ref|XP_003768731.1| PREDICTED: serine/arginine-rich splicing factor 2 [Sarcophilus
harrisii]
Length = 224
Score = 169 bits (427), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 83/103 (80%), Positives = 90/103 (87%), Gaps = 3/103 (2%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFE---RCGEVGDIYIPRDRFTRESRGF 57
MSYGRPPP +EGM SLKVDNLTYRT+PD LRRVFE R G VGD+YIPRDR+T+ESRGF
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKDGRYGRVGDVYIPRDRYTKESRGF 60
Query: 58 AFVRFFDKRDAEDALDAMDGRMLDGRELRVQMARYGRPPSSSR 100
AFVRF DKRDAEDA+DAMDG +LDGRELRVQMARYGRPP S
Sbjct: 61 AFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMARYGRPPDSHH 103
>gi|427797867|gb|JAA64385.1| Putative splicing factor sr protein superfamily, partial
[Rhipicephalus pulchellus]
Length = 300
Score = 168 bits (426), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 77/95 (81%), Positives = 87/95 (91%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGR PP I+GM SLKVDNLTYRTTP+DL+RVFER G+VGD+YIPR +TRESRGFAFV
Sbjct: 1 MSYGRAPPTIDGMTSLKVDNLTYRTTPEDLKRVFERYGDVGDVYIPRHPYTRESRGFAFV 60
Query: 61 RFFDKRDAEDALDAMDGRMLDGRELRVQMARYGRP 95
RF+DKRD EDA+DA+DG M+DGRELRVQMARYGRP
Sbjct: 61 RFYDKRDCEDAMDALDGYMMDGRELRVQMARYGRP 95
>gi|427783535|gb|JAA57219.1| Putative splicing factor sr protein superfamily [Rhipicephalus
pulchellus]
Length = 401
Score = 168 bits (426), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 74/95 (77%), Positives = 88/95 (92%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
M+YGR PP+I+GM SLKVDNLTYRTTP+DL+RVFE+ G+VGD+YIPR +TRESRGFAFV
Sbjct: 1 MNYGRAPPQIDGMTSLKVDNLTYRTTPEDLKRVFEKYGDVGDVYIPRHPYTRESRGFAFV 60
Query: 61 RFFDKRDAEDALDAMDGRMLDGRELRVQMARYGRP 95
RF+DKRD EDA+D++DG +LDGRELRVQMARYGRP
Sbjct: 61 RFYDKRDCEDAMDSLDGYILDGRELRVQMARYGRP 95
>gi|355568958|gb|EHH25239.1| hypothetical protein EGK_09022 [Macaca mulatta]
Length = 222
Score = 168 bits (426), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 81/104 (77%), Positives = 90/104 (86%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPP +EGM SLKVDNLTYRT+PD LRRVFE+ G VGD+YIPRDR+T+ESRGFAFV
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 61 RFFDKRDAEDALDAMDGRMLDGRELRVQMARYGRPPSSSRSRGG 104
RF DKRDAEDA+DAMDG +LDGRELRVQMARYGR +R G
Sbjct: 61 RFHDKRDAEDAMDAMDGAVLDGRELRVQMARYGRXXXXXSARAG 104
>gi|405967042|gb|EKC32256.1| Splicing factor, arginine/serine-rich 2 [Crassostrea gigas]
Length = 183
Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 80/100 (80%), Positives = 90/100 (90%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGR PP I+GM SLKVDNLTYRTTP+DLRR F++ G+VGD+YIPRDRFTRESRGFAFV
Sbjct: 1 MSYGRGPPEIDGMTSLKVDNLTYRTTPEDLRRAFDKYGDVGDVYIPRDRFTRESRGFAFV 60
Query: 61 RFFDKRDAEDALDAMDGRMLDGRELRVQMARYGRPPSSSR 100
RF+DKRDAEDALD+MDG ++DGRELRVQMARYGRP R
Sbjct: 61 RFYDKRDAEDALDSMDGAIMDGRELRVQMARYGRPTEPYR 100
>gi|270012859|gb|EFA09307.1| hypothetical protein TcasGA2_TC030627 [Tribolium castaneum]
Length = 161
Score = 166 bits (420), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 83/90 (92%), Positives = 87/90 (96%), Gaps = 3/90 (3%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPPRI+GMVSLKVDNLTYRTTP+DLRRVFERCG+VGDIYIPRDRFTRESRGFAFV
Sbjct: 1 MSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGDVGDIYIPRDRFTRESRGFAFV 60
Query: 61 RFFDKRDAEDALDAMDGRMLDGRELRVQMA 90
R+ RDAEDALDAMDGRMLDGRELRVQMA
Sbjct: 61 RY---RDAEDALDAMDGRMLDGRELRVQMA 87
>gi|195472373|ref|XP_002088475.1| GE12283 [Drosophila yakuba]
gi|194174576|gb|EDW88187.1| GE12283 [Drosophila yakuba]
Length = 217
Score = 166 bits (419), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 84/112 (75%), Positives = 89/112 (79%), Gaps = 23/112 (20%)
Query: 5 RPPPRIEGMVSLK-----------------------VDNLTYRTTPDDLRRVFERCGEVG 41
RPPPRI+GMVSLK VDNLTYRTTP+DLRRVFERCGEVG
Sbjct: 14 RPPPRIDGMVSLKASICKRKRDQIAHKMAAGWQRCVVDNLTYRTTPEDLRRVFERCGEVG 73
Query: 42 DIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAMDGRMLDGRELRVQMARYG 93
DIYIPRDR+TRESRGFAFVRF+DKRDAEDAL+AMDGRMLDGRELRVQMARYG
Sbjct: 74 DIYIPRDRYTRESRGFAFVRFYDKRDAEDALEAMDGRMLDGRELRVQMARYG 125
>gi|303324701|pdb|2KN4|A Chain A, The Structure Of The Rrm Domain Of Sc35
Length = 158
Score = 161 bits (407), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 75/92 (81%), Positives = 83/92 (90%)
Query: 10 IEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAE 69
+EGM SLKVDNLTYRT+PD LRRVFE+ G VGD+YIPRDR+T+ESRGFAFVRF DKRDAE
Sbjct: 67 VEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAE 126
Query: 70 DALDAMDGRMLDGRELRVQMARYGRPPSSSRS 101
DA+DAMDG +LDGRELRVQMARYGRPP S S
Sbjct: 127 DAMDAMDGAVLDGRELRVQMARYGRPPDSHHS 158
>gi|21751099|dbj|BAC03903.1| unnamed protein product [Homo sapiens]
Length = 201
Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 77/93 (82%), Positives = 85/93 (91%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPP +EGM SLKVDNLTYRT+PD LRRVFE+ G VGD+YIPRDR+T+ESRGFAFV
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 61 RFFDKRDAEDALDAMDGRMLDGRELRVQMARYG 93
RF DKRDAEDA+DAMDG +LDGRELRVQMAR G
Sbjct: 61 RFHDKRDAEDAMDAMDGAVLDGRELRVQMARCG 93
>gi|241020201|ref|XP_002405861.1| IFN-response element binding factor, putative [Ixodes scapularis]
gi|215491811|gb|EEC01452.1| IFN-response element binding factor, putative [Ixodes scapularis]
Length = 194
Score = 160 bits (406), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 74/96 (77%), Positives = 86/96 (89%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGR PP I+GM SLKVDNLTYRTTP+DL+RVFE+ G+VGD+YIPR +TR+SRGFAFV
Sbjct: 1 MSYGRGPPTIDGMTSLKVDNLTYRTTPEDLKRVFEKYGDVGDVYIPRHPYTRDSRGFAFV 60
Query: 61 RFFDKRDAEDALDAMDGRMLDGRELRVQMARYGRPP 96
RF+DKRD EDA+DA+DG +LDGRELRVQMARYG P
Sbjct: 61 RFYDKRDGEDAMDALDGYILDGRELRVQMARYGLVP 96
>gi|389609107|dbj|BAM18165.1| serine/arginine rich splicing factor [Papilio xuthus]
Length = 151
Score = 159 bits (401), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 77/85 (90%), Positives = 83/85 (97%)
Query: 13 MVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDAL 72
MVSLKVDNLTYRTT +DLRRVFERCG+VGDIYIPRDR+TRESRGFAFVRFFD+RDAEDAL
Sbjct: 1 MVSLKVDNLTYRTTAEDLRRVFERCGDVGDIYIPRDRYTRESRGFAFVRFFDRRDAEDAL 60
Query: 73 DAMDGRMLDGRELRVQMARYGRPPS 97
D++DGRMLDGRELRVQMARYGRP S
Sbjct: 61 DSLDGRMLDGRELRVQMARYGRPSS 85
>gi|115843186|ref|XP_001198082.1| PREDICTED: serine/arginine-rich splicing factor 2-like
[Strongylocentrotus purpuratus]
Length = 141
Score = 159 bits (401), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 76/95 (80%), Positives = 85/95 (89%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGR P IEGM SLKVDNLTY TTP+DLRR FE+ GEVGDIYIPRD+F+RESRGFAFV
Sbjct: 1 MSYGRIAPDIEGMTSLKVDNLTYSTTPEDLRRCFEKYGEVGDIYIPRDKFSRESRGFAFV 60
Query: 61 RFFDKRDAEDALDAMDGRMLDGRELRVQMARYGRP 95
R+ DKRDAEDA+D+MDG + DGR+LRVQMARYGRP
Sbjct: 61 RYPDKRDAEDAMDSMDGNLYDGRKLRVQMARYGRP 95
>gi|321458047|gb|EFX69122.1| hypothetical protein DAPPUDRAFT_62581 [Daphnia pulex]
Length = 109
Score = 157 bits (398), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/92 (81%), Positives = 86/92 (93%)
Query: 4 GRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFF 63
GR PPRIEGM SLKVDNLTYRTT +DLRRVFE+ G+VGD+YIP+DRF+RESRGFAFVRF+
Sbjct: 3 GRGPPRIEGMTSLKVDNLTYRTTCEDLRRVFEKYGDVGDVYIPKDRFSRESRGFAFVRFY 62
Query: 64 DKRDAEDALDAMDGRMLDGRELRVQMARYGRP 95
D+RD EDA+ AMDGRM+DGRELRVQ+ARYGRP
Sbjct: 63 DRRDGEDAMHAMDGRMMDGRELRVQLARYGRP 94
>gi|431908736|gb|ELK12328.1| Splicing factor, arginine/serine-rich 2 [Pteropus alecto]
Length = 178
Score = 156 bits (395), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 72/88 (81%), Positives = 80/88 (90%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPP +EGM SLKVDNLTYRT+PD LRRVFE+ G VGD+YIPRDR+T+ESRGFAFV
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 61 RFFDKRDAEDALDAMDGRMLDGRELRVQ 88
RF DKRDAEDA+DAMDG +LDGRELR Q
Sbjct: 61 RFHDKRDAEDAMDAMDGAVLDGRELRPQ 88
>gi|115843189|ref|XP_001198099.1| PREDICTED: serine/arginine-rich splicing factor 2-like
[Strongylocentrotus purpuratus]
Length = 141
Score = 156 bits (395), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 75/95 (78%), Positives = 84/95 (88%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGR P EGM SLKVDNLTY TTP+DLRR FE+ GEVGDIYIPRD+F+RESRGFAFV
Sbjct: 1 MSYGRIAPDFEGMTSLKVDNLTYSTTPEDLRRCFEKYGEVGDIYIPRDKFSRESRGFAFV 60
Query: 61 RFFDKRDAEDALDAMDGRMLDGRELRVQMARYGRP 95
R+ DKRDAEDA+D+MDG + DGR+LRVQMARYGRP
Sbjct: 61 RYPDKRDAEDAMDSMDGNLYDGRKLRVQMARYGRP 95
>gi|443696471|gb|ELT97165.1| hypothetical protein CAPTEDRAFT_18729 [Capitella teleta]
Length = 160
Score = 155 bits (392), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 72/95 (75%), Positives = 85/95 (89%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MS+ R PP IEGM SLKVDNLTYRTT +DLRR FE+ G+VGD+YIPRDRF+ ESRGFAFV
Sbjct: 1 MSHSRTPPNIEGMASLKVDNLTYRTTTEDLRRAFEKYGDVGDVYIPRDRFSHESRGFAFV 60
Query: 61 RFFDKRDAEDALDAMDGRMLDGRELRVQMARYGRP 95
RFFDKRDA+DA+++MDG ++DGRELRVQ A+YGRP
Sbjct: 61 RFFDKRDADDAMESMDGAVMDGRELRVQSAKYGRP 95
>gi|119609849|gb|EAW89443.1| splicing factor, arginine/serine-rich 2, isoform CRA_d [Homo
sapiens]
gi|193783682|dbj|BAG53593.1| unnamed protein product [Homo sapiens]
Length = 209
Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 72/88 (81%), Positives = 79/88 (89%)
Query: 13 MVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDAL 72
M SLKVDNLTYRT+PD LRRVFE+ G VGD+YIPRDR+T+ESRGFAFVRF DKRDAEDA+
Sbjct: 1 MTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAM 60
Query: 73 DAMDGRMLDGRELRVQMARYGRPPSSSR 100
DAMDG +LDGRELRVQMARYGRPP S
Sbjct: 61 DAMDGAVLDGRELRVQMARYGRPPDSHH 88
>gi|198415726|ref|XP_002129926.1| PREDICTED: similar to splicing factor, arginine/serine-rich 2
(SC-35) [Ciona intestinalis]
Length = 178
Score = 150 bits (380), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 69/92 (75%), Positives = 83/92 (90%)
Query: 4 GRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFF 63
GRPPP ++ MVSLKVDNLTYRT+P+ L+R FE+ G+VGD+YIPRDR++RESRGFAFVRF+
Sbjct: 5 GRPPPGLDNMVSLKVDNLTYRTSPETLKRSFEKYGDVGDVYIPRDRYSRESRGFAFVRFY 64
Query: 64 DKRDAEDALDAMDGRMLDGRELRVQMARYGRP 95
DKRDAEDA+D MDG+ +DGR LRV MARYGRP
Sbjct: 65 DKRDAEDAMDCMDGKTMDGRVLRVAMARYGRP 96
>gi|440895154|gb|ELR47416.1| Serine/arginine-rich splicing factor 2, partial [Bos grunniens
mutus]
Length = 86
Score = 150 bits (378), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 71/86 (82%), Positives = 79/86 (91%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPP +EGM SLKVDNLTYRT+PD LRRVFE+ G VGD+YIPRDR+T+ESRGFAFV
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 61 RFFDKRDAEDALDAMDGRMLDGRELR 86
RF DKRDAEDA+DAMDG +LDGRELR
Sbjct: 61 RFHDKRDAEDAMDAMDGAVLDGRELR 86
>gi|443730022|gb|ELU15717.1| hypothetical protein CAPTEDRAFT_175255 [Capitella teleta]
Length = 163
Score = 149 bits (376), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 68/95 (71%), Positives = 84/95 (88%)
Query: 5 RPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFD 64
R PP+IEGMVSLKVDNLTYRT+ +DL + FE+ GEVGD+YIPRD +TRE++GFAFVR+++
Sbjct: 3 RGPPQIEGMVSLKVDNLTYRTSKEDLLQAFEKYGEVGDVYIPRDPYTRENKGFAFVRYYE 62
Query: 65 KRDAEDALDAMDGRMLDGRELRVQMARYGRPPSSS 99
KRDAEDA+D+MDG +LDGRELRVQ A+YGRP S
Sbjct: 63 KRDAEDAIDSMDGAVLDGRELRVQTAKYGRPTEPS 97
>gi|326930671|ref|XP_003211466.1| PREDICTED: hypothetical protein LOC100548975 [Meleagris
gallopavo]
Length = 239
Score = 148 bits (374), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 70/95 (73%), Positives = 79/95 (83%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPP +EGM SLKVDNLTYRT+PD LRRVFE+ G VGD+YIPRDR+T+ESRGFAFV
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 61 RFFDKRDAEDALDAMDGRMLDGRELRVQMARYGRP 95
RF DKRDAEDA+DAMDG +LDGR + RP
Sbjct: 61 RFHDKRDAEDAMDAMDGAVLDGRXXXATRSEQWRP 95
>gi|9837439|gb|AAG00575.1|AF288041_1 splicing factor arginine/serine rich 2 [Oryzias latipes]
Length = 211
Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 70/84 (83%), Positives = 79/84 (94%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
SLKVDNLTYRT+P+ LRRVFE+ G VGD+YIPRDR+++ESRGFAFVRFFDKRDAEDA+DA
Sbjct: 1 SLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYSKESRGFAFVRFFDKRDAEDAMDA 60
Query: 75 MDGRMLDGRELRVQMARYGRPPSS 98
MDG +LDGRELRVQMARYGRPP S
Sbjct: 61 MDGALLDGRELRVQMARYGRPPDS 84
>gi|296216761|ref|XP_002754708.1| PREDICTED: serine/arginine-rich splicing factor 8-like
[Callithrix jacchus]
Length = 295
Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 69/94 (73%), Positives = 80/94 (85%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MS GRPPP ++GM++LKVDNLTYRT+PD LRRVFE+ G VGD+YIPR+ T+ RGFAFV
Sbjct: 1 MSCGRPPPDVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFV 60
Query: 61 RFFDKRDAEDALDAMDGRMLDGRELRVQMARYGR 94
RF D+RDAEDA AMDG LDGRELRVQ+ARYGR
Sbjct: 61 RFHDQRDAEDAEAAMDGAELDGRELRVQVARYGR 94
>gi|221117570|ref|XP_002161458.1| PREDICTED: uncharacterized protein LOC100200042 isoform 2 [Hydra
magnipapillata]
Length = 195
Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 67/91 (73%), Positives = 83/91 (91%)
Query: 5 RPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFD 64
R PP+IEGMVSLKVDNLTYRT+ +DL R F++ GE+GDIYIPRDR T ESRGFAFVR+++
Sbjct: 9 RGPPQIEGMVSLKVDNLTYRTSMEDLERYFKKYGELGDIYIPRDRNTHESRGFAFVRYYE 68
Query: 65 KRDAEDALDAMDGRMLDGRELRVQMARYGRP 95
+RDAEDA+D+MDG+++DGRE+RV MARYGRP
Sbjct: 69 ERDAEDAMDSMDGKVIDGREIRVAMARYGRP 99
>gi|427794699|gb|JAA62801.1| Putative splicing factor sr protein superfamily, partial
[Rhipicephalus pulchellus]
Length = 368
Score = 146 bits (369), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 66/80 (82%), Positives = 75/80 (93%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
LKVDNLTYRTTP+DL+RVFER G+VGD+YIPR +TRESRGFAFVRF+DKRD EDA+DA+
Sbjct: 1 LKVDNLTYRTTPEDLKRVFERYGDVGDVYIPRHPYTRESRGFAFVRFYDKRDCEDAMDAL 60
Query: 76 DGRMLDGRELRVQMARYGRP 95
DG M+DGRELRVQMARYGRP
Sbjct: 61 DGYMMDGRELRVQMARYGRP 80
>gi|156349201|ref|XP_001621959.1| hypothetical protein NEMVEDRAFT_v1g143061 [Nematostella vectensis]
gi|156381130|ref|XP_001632119.1| predicted protein [Nematostella vectensis]
gi|156208328|gb|EDO29859.1| predicted protein [Nematostella vectensis]
gi|156219170|gb|EDO40056.1| predicted protein [Nematostella vectensis]
Length = 127
Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 70/96 (72%), Positives = 83/96 (86%)
Query: 5 RPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFD 64
R PP I+GM SLKVDNLTYRTT +DL++VF++ G++GDIYIPRDR T ESRGFAFVRF++
Sbjct: 7 RGPPEIDGMTSLKVDNLTYRTTVEDLKQVFKKYGDLGDIYIPRDRNTHESRGFAFVRFYE 66
Query: 65 KRDAEDALDAMDGRMLDGRELRVQMARYGRPPSSSR 100
KRDAEDA+D MD +LDGRE+RVQMARYGRP S R
Sbjct: 67 KRDAEDAMDCMDRHLLDGREVRVQMARYGRPTDSYR 102
>gi|380809044|gb|AFE76397.1| serine/arginine-rich splicing factor 8 [Macaca mulatta]
gi|384944954|gb|AFI36082.1| serine/arginine-rich splicing factor 8 [Macaca mulatta]
Length = 287
Score = 145 bits (367), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 68/94 (72%), Positives = 80/94 (85%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MS GRPPP ++GM++LKVDNLTYRT+PD LRRVFE+ G VGD+YIPR+ T+ RGFAFV
Sbjct: 1 MSCGRPPPDVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFV 60
Query: 61 RFFDKRDAEDALDAMDGRMLDGRELRVQMARYGR 94
RF D+RDA+DA AMDG LDGRELRVQ+ARYGR
Sbjct: 61 RFHDRRDAQDAEAAMDGAELDGRELRVQVARYGR 94
>gi|119609847|gb|EAW89441.1| splicing factor, arginine/serine-rich 2, isoform CRA_b [Homo
sapiens]
Length = 208
Score = 145 bits (367), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 72/100 (72%), Positives = 79/100 (79%), Gaps = 13/100 (13%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPP +EGM SLKVDNLTYRT+PD +YIPRDR+T+ESRGFAFV
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPD-------------TVYIPRDRYTKESRGFAFV 47
Query: 61 RFFDKRDAEDALDAMDGRMLDGRELRVQMARYGRPPSSSR 100
RF DKRDAEDA+DAMDG +LDGRELRVQMARYGRPP S
Sbjct: 48 RFHDKRDAEDAMDAMDGAVLDGRELRVQMARYGRPPDSHH 87
>gi|388490247|ref|NP_001253264.1| serine/arginine-rich splicing factor 8 [Macaca mulatta]
gi|402894987|ref|XP_003910620.1| PREDICTED: serine/arginine-rich splicing factor 8 [Papio anubis]
gi|387542734|gb|AFJ71994.1| serine/arginine-rich splicing factor 8 [Macaca mulatta]
Length = 287
Score = 145 bits (367), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 68/94 (72%), Positives = 80/94 (85%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MS GRPPP ++GM++LKVDNLTYRT+PD LRRVFE+ G VGD+YIPR+ T+ RGFAFV
Sbjct: 1 MSCGRPPPDVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFV 60
Query: 61 RFFDKRDAEDALDAMDGRMLDGRELRVQMARYGR 94
RF D+RDA+DA AMDG LDGRELRVQ+ARYGR
Sbjct: 61 RFHDRRDAQDAEAAMDGAELDGRELRVQVARYGR 94
>gi|426356205|ref|XP_004045477.1| PREDICTED: uncharacterized protein LOC101137976 [Gorilla gorilla
gorilla]
Length = 496
Score = 145 bits (366), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 66/94 (70%), Positives = 79/94 (84%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MS GRPPP ++GM++LKVDNLTYRT+PD LRRVFE+ VGD+YIPR+ T+ RGFAFV
Sbjct: 195 MSCGRPPPDVDGMITLKVDNLTYRTSPDSLRRVFEKYWPVGDVYIPREPHTKAPRGFAFV 254
Query: 61 RFFDKRDAEDALDAMDGRMLDGRELRVQMARYGR 94
RF D+ DA+DA AMDG +LDGRELRV+MARYGR
Sbjct: 255 RFHDRSDAQDAEAAMDGAVLDGRELRVRMARYGR 288
>gi|355566974|gb|EHH23353.1| hypothetical protein EGK_06805 [Macaca mulatta]
Length = 287
Score = 145 bits (365), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 70/100 (70%), Positives = 82/100 (82%), Gaps = 2/100 (2%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MS RPPP ++GM++LKVDNLTYRT+PD LRRVFE+ G VGD+YIPR+ T+ RGFAFV
Sbjct: 1 MSCSRPPPDVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREHHTKAPRGFAFV 60
Query: 61 RFFDKRDAEDALDAMDGRMLDGRELRVQMARYGR--PPSS 98
RF D+RDA+DA AMDG LDGRELRVQ+ARYGR PP S
Sbjct: 61 RFHDRRDAQDAEAAMDGAELDGRELRVQVARYGRRDPPRS 100
>gi|114613263|ref|XP_519086.2| PREDICTED: uncharacterized protein LOC463398 isoform 2 [Pan
troglodytes]
Length = 293
Score = 144 bits (364), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 67/94 (71%), Positives = 79/94 (84%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MS GRP P ++GM++LKVDNLTYRT+PD LRRVFE+ G VGD+YIPR+ T+ RGFAFV
Sbjct: 1 MSCGRPHPDVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFV 60
Query: 61 RFFDKRDAEDALDAMDGRMLDGRELRVQMARYGR 94
RF D+ DA+DA AMDG +LDGRELRVQMARYGR
Sbjct: 61 RFHDRSDAQDAEAAMDGAVLDGRELRVQMARYGR 94
>gi|307219198|ref|NP_001182520.1| splicing factor, arginine/serine-rich 2B [Pongo abelii]
Length = 282
Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 68/94 (72%), Positives = 80/94 (85%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MS GRPPP ++GM++LKVDNLTYRT+PD LRRVFE+ G VGD+YIPR+ T+ RGFAFV
Sbjct: 1 MSCGRPPPDVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFV 60
Query: 61 RFFDKRDAEDALDAMDGRMLDGRELRVQMARYGR 94
RF D+RDA+DA AMDG LDGRELRVQ+ARYGR
Sbjct: 61 RFHDRRDAQDAEAAMDGAELDGRELRVQVARYGR 94
>gi|15055543|ref|NP_115285.1| serine/arginine-rich splicing factor 8 [Homo sapiens]
gi|74761217|sp|Q9BRL6.1|SRSF8_HUMAN RecName: Full=Serine/arginine-rich splicing factor 8; AltName:
Full=Pre-mRNA-splicing factor SRP46; Short=Splicing
factor SRp46; AltName: Full=Splicing factor,
arginine/serine-rich 2B
gi|14141201|gb|AAK54350.1| SRp46 splicing factor [Homo sapiens]
gi|119587358|gb|EAW66954.1| Splicing factor, arginine/serine-rich, 46kD, isoform CRA_a [Homo
sapiens]
gi|119587359|gb|EAW66955.1| Splicing factor, arginine/serine-rich, 46kD, isoform CRA_a [Homo
sapiens]
gi|119587360|gb|EAW66956.1| Splicing factor, arginine/serine-rich, 46kD, isoform CRA_a [Homo
sapiens]
gi|189069077|dbj|BAG35415.1| unnamed protein product [Homo sapiens]
gi|193785751|dbj|BAG51186.1| unnamed protein product [Homo sapiens]
Length = 282
Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 68/94 (72%), Positives = 80/94 (85%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MS GRPPP ++GM++LKVDNLTYRT+PD LRRVFE+ G VGD+YIPR+ T+ RGFAFV
Sbjct: 1 MSCGRPPPDVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFV 60
Query: 61 RFFDKRDAEDALDAMDGRMLDGRELRVQMARYGR 94
RF D+RDA+DA AMDG LDGRELRVQ+ARYGR
Sbjct: 61 RFHDRRDAQDAEAAMDGAELDGRELRVQVARYGR 94
>gi|332837526|ref|XP_001139465.2| PREDICTED: serine/arginine-rich splicing factor 8 isoform 1 [Pan
troglodytes]
gi|410045734|ref|XP_003952050.1| PREDICTED: serine/arginine-rich splicing factor 8 isoform 2 [Pan
troglodytes]
gi|410226370|gb|JAA10404.1| serine/arginine-rich splicing factor 8 [Pan troglodytes]
gi|410255620|gb|JAA15777.1| serine/arginine-rich splicing factor 8 [Pan troglodytes]
gi|410295516|gb|JAA26358.1| serine/arginine-rich splicing factor 8 [Pan troglodytes]
gi|410348530|gb|JAA40869.1| serine/arginine-rich splicing factor 8 [Pan troglodytes]
gi|410348532|gb|JAA40870.1| serine/arginine-rich splicing factor 8 [Pan troglodytes]
gi|410348534|gb|JAA40871.1| serine/arginine-rich splicing factor 8 [Pan troglodytes]
Length = 282
Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 68/94 (72%), Positives = 80/94 (85%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MS GRPPP ++GM++LKVDNLTYRT+PD LRRVFE+ G VGD+YIPR+ T+ RGFAFV
Sbjct: 1 MSCGRPPPDVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFV 60
Query: 61 RFFDKRDAEDALDAMDGRMLDGRELRVQMARYGR 94
RF D+RDA+DA AMDG LDGRELRVQ+ARYGR
Sbjct: 61 RFHDRRDAQDAEAAMDGAELDGRELRVQVARYGR 94
>gi|34784708|gb|AAH57783.1| SFRS2B protein [Homo sapiens]
Length = 275
Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 68/94 (72%), Positives = 80/94 (85%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MS GRPPP ++GM++LKVDNLTYRT+PD LRRVFE+ G VGD+YIPR+ T+ RGFAFV
Sbjct: 1 MSCGRPPPDVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFV 60
Query: 61 RFFDKRDAEDALDAMDGRMLDGRELRVQMARYGR 94
RF D+RDA+DA AMDG LDGRELRVQ+ARYGR
Sbjct: 61 RFHDRRDAQDAEAAMDGAELDGRELRVQVARYGR 94
>gi|301765996|ref|XP_002918431.1| PREDICTED: hypothetical protein LOC100477809 [Ailuropoda
melanoleuca]
Length = 182
Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 67/82 (81%), Positives = 75/82 (91%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPP +EGM SLKVDNLTYRT+PD LRRVFE+ G VGD+YIPRDR+T+ESRGFAFV
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 61 RFFDKRDAEDALDAMDGRMLDG 82
RF DKRDAEDA+DAMDG +LDG
Sbjct: 61 RFHDKRDAEDAMDAMDGAVLDG 82
>gi|281342789|gb|EFB18373.1| hypothetical protein PANDA_006871 [Ailuropoda melanoleuca]
Length = 173
Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 67/82 (81%), Positives = 75/82 (91%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPP +EGM SLKVDNLTYRT+PD LRRVFE+ G VGD+YIPRDR+T+ESRGFAFV
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 61 RFFDKRDAEDALDAMDGRMLDG 82
RF DKRDAEDA+DAMDG +LDG
Sbjct: 61 RFHDKRDAEDAMDAMDGAVLDG 82
>gi|332208823|ref|XP_003253510.1| PREDICTED: serine/arginine-rich splicing factor 8 [Nomascus
leucogenys]
Length = 303
Score = 142 bits (359), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 66/94 (70%), Positives = 78/94 (82%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MS GRPPP ++GM++LKVDNLTYRT+PD LRRVFE+ G VGD+YIP + T+ RGFAFV
Sbjct: 1 MSCGRPPPDVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPLEHRTKAPRGFAFV 60
Query: 61 RFFDKRDAEDALDAMDGRMLDGRELRVQMARYGR 94
RF D DA+DA AMDG +LDGRELRVQ+ARYGR
Sbjct: 61 RFHDWSDAQDAEAAMDGAVLDGRELRVQVARYGR 94
>gi|397468421|ref|XP_003805885.1| PREDICTED: uncharacterized protein LOC100969202 [Pan paniscus]
Length = 293
Score = 142 bits (358), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 66/94 (70%), Positives = 78/94 (82%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MS GRP P ++GM++LKVDNLTYRT+PD LRRVFE+ G VGD+YIPR+ T+ R FAFV
Sbjct: 1 MSCGRPHPDVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRSFAFV 60
Query: 61 RFFDKRDAEDALDAMDGRMLDGRELRVQMARYGR 94
RF D+ DA+DA AMDG +LDGRELRVQMARYGR
Sbjct: 61 RFHDRSDAQDAEAAMDGAVLDGRELRVQMARYGR 94
>gi|426370158|ref|XP_004052038.1| PREDICTED: serine/arginine-rich splicing factor 8 [Gorilla
gorilla gorilla]
Length = 282
Score = 141 bits (356), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 66/94 (70%), Positives = 78/94 (82%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MS GRPPP ++GM++LKVDNLTYRT+PD LR VFE+ G VGD+YIPR+ T+ GFAFV
Sbjct: 1 MSCGRPPPDVDGMITLKVDNLTYRTSPDSLRPVFEKYGRVGDVYIPREPHTKAPWGFAFV 60
Query: 61 RFFDKRDAEDALDAMDGRMLDGRELRVQMARYGR 94
RF D+ DA+DA AMDG +LDGRELRVQMARYGR
Sbjct: 61 RFHDRSDAQDAEAAMDGAVLDGRELRVQMARYGR 94
>gi|119609848|gb|EAW89442.1| splicing factor, arginine/serine-rich 2, isoform CRA_c [Homo
sapiens]
Length = 163
Score = 141 bits (356), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 64/77 (83%), Positives = 71/77 (92%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPP +EGM SLKVDNLTYRT+PD LRRVFE+ G VGD+YIPRDR+T+ESRGFAFV
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 61 RFFDKRDAEDALDAMDG 77
RF DKRDAEDA+DAMDG
Sbjct: 61 RFHDKRDAEDAMDAMDG 77
>gi|51094548|gb|EAL23802.1| similar to Splicing factor, arginine/serine-rich, 46kD [Homo
sapiens]
Length = 549
Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 65/94 (69%), Positives = 78/94 (82%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MS GRPPP ++GM++LKVDNLTYRT+PD LRRVFE+ G VGD+YIP + T+ RGFAFV
Sbjct: 257 MSCGRPPPDVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPLEPHTKAPRGFAFV 316
Query: 61 RFFDKRDAEDALDAMDGRMLDGRELRVQMARYGR 94
RF D+ DA+DA AMDG +LD RELRV+MARYGR
Sbjct: 317 RFHDRSDAQDAEAAMDGAVLDERELRVRMARYGR 350
>gi|51094549|gb|EAL23803.1| similar to Splicing factor, arginine/serine-rich, 46kD [Homo
sapiens]
Length = 293
Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 65/94 (69%), Positives = 78/94 (82%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MS GRPPP ++GM++LKVDNLTYRT+PD LRRVFE+ G VGD+YIP + T+ RGFAFV
Sbjct: 1 MSCGRPPPDVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPLEPHTKAPRGFAFV 60
Query: 61 RFFDKRDAEDALDAMDGRMLDGRELRVQMARYGR 94
RF D+ DA+DA AMDG +LD RELRV+MARYGR
Sbjct: 61 RFHDRSDAQDAEAAMDGAVLDERELRVRMARYGR 94
>gi|21752539|dbj|BAC04206.1| unnamed protein product [Homo sapiens]
gi|119609852|gb|EAW89446.1| splicing factor, arginine/serine-rich 2, isoform CRA_f [Homo
sapiens]
Length = 186
Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 74/119 (62%), Positives = 82/119 (68%), Gaps = 9/119 (7%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPP +EGM SLKVDNLTYRT+PD LRRVFE+ G VGD+YIPRDR+T+ESRGFAFV
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 61 RFFDKRDAEDALDAMDGRMLDGRELRVQMAR---------YGRPPSSSRSRGGRDRDRR 110
RF DKRDAEDA+DAMDG + AR GRPPS G RR
Sbjct: 61 RFHDKRDAEDAMDAMDGAVPGLAADLATAARSLGPALVLDLGRPPSPDPHEGPSPSPRR 119
>gi|391337692|ref|XP_003743199.1| PREDICTED: uncharacterized protein LOC100907227 [Metaseiulus
occidentalis]
Length = 256
Score = 139 bits (349), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 65/93 (69%), Positives = 78/93 (83%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRF 62
+G PP I GMVSLKVDNLTYRTT +DL+RVF + G+VGD+YIPR+ ESRGFAFVRF
Sbjct: 63 FGNGPPDIHGMVSLKVDNLTYRTTVEDLKRVFRKHGDVGDVYIPRNPRNNESRGFAFVRF 122
Query: 63 FDKRDAEDALDAMDGRMLDGRELRVQMARYGRP 95
FD+RDAE+A+DA+DG LDGRELR+ MA+Y RP
Sbjct: 123 FDRRDAEEAMDALDGYRLDGRELRIAMAKYARP 155
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/63 (71%), Positives = 52/63 (82%), Gaps = 1/63 (1%)
Query: 1 MSYG-RPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAF 59
MS+G R PP I GMVSLKVDNLTYRTT +DL+RVF + G+VGD+YIPR+ ESRGFAF
Sbjct: 1 MSFGGRGPPDIHGMVSLKVDNLTYRTTVEDLKRVFRKHGDVGDVYIPRNPRNNESRGFAF 60
Query: 60 VRF 62
VRF
Sbjct: 61 VRF 63
>gi|226476662|emb|CAX72223.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
Length = 151
Score = 139 bits (349), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 68/93 (73%), Positives = 78/93 (83%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRF 62
YGR PPRI+GMVSLKVDNL YRTT DDLRRVF R GEVGDIYIPRD +T ESRGFAFVR+
Sbjct: 4 YGRSPPRIDGMVSLKVDNLAYRTTIDDLRRVFSRFGEVGDIYIPRDPYTFESRGFAFVRY 63
Query: 63 FDKRDAEDALDAMDGRMLDGRELRVQMARYGRP 95
R+A+ A+ MDG +DGRE+RVQ+A+YGRP
Sbjct: 64 CTDREADCAIRGMDGHKVDGREVRVQIAKYGRP 96
>gi|332837543|ref|XP_001139222.2| PREDICTED: uncharacterized protein LOC738374 [Pan troglodytes]
Length = 279
Score = 138 bits (348), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 65/94 (69%), Positives = 78/94 (82%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MS GRPPP ++GM++LKVDNLTYRT+PD LRRVFE+ G VGD+YIP + T+ RGFAFV
Sbjct: 1 MSCGRPPPDVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPLEPHTKAPRGFAFV 60
Query: 61 RFFDKRDAEDALDAMDGRMLDGRELRVQMARYGR 94
RF D+ DA+DA AMDG +LD RELRV+MARYGR
Sbjct: 61 RFHDRSDAQDAEAAMDGAVLDERELRVRMARYGR 94
>gi|226476676|emb|CAX72230.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
Length = 151
Score = 138 bits (348), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 68/93 (73%), Positives = 78/93 (83%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRF 62
YGR PPRI+GMVSLKVDNL YRTT DDLRRVF R GEVGDIYIPRD +T ESRGFAFVR+
Sbjct: 4 YGRSPPRIDGMVSLKVDNLAYRTTIDDLRRVFSRFGEVGDIYIPRDPYTFESRGFAFVRY 63
Query: 63 FDKRDAEDALDAMDGRMLDGRELRVQMARYGRP 95
+ R+A+ A+ MDG +DGRE+RVQ A+YGRP
Sbjct: 64 YTDREADCAIRGMDGHKVDGREVRVQRAKYGRP 96
>gi|444727801|gb|ELW68279.1| Serine/arginine-rich splicing factor 2 [Tupaia chinensis]
Length = 218
Score = 138 bits (347), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 64/77 (83%), Positives = 71/77 (92%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPP +EGM SLKVDNLTYRT+PD LRRVFE+ G VGD+YIPRDR+T+ESRGFAFV
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 61 RFFDKRDAEDALDAMDG 77
RF DKRDAEDA+DAMDG
Sbjct: 61 RFHDKRDAEDAMDAMDG 77
>gi|395743396|ref|XP_002822424.2| PREDICTED: uncharacterized protein LOC100448817 [Pongo abelii]
Length = 292
Score = 138 bits (347), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 65/94 (69%), Positives = 76/94 (80%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MS GRPPP ++GM++LKVDNLTYRT+ D LRRVFE+ G VGD+YIPR+ T+ RGFAFV
Sbjct: 1 MSCGRPPPDVDGMITLKVDNLTYRTSHDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFV 60
Query: 61 RFFDKRDAEDALDAMDGRMLDGRELRVQMARYGR 94
RF + DA+DA AMD MLDGRELRVQMA YGR
Sbjct: 61 RFHHRSDAQDAEAAMDRAMLDGRELRVQMALYGR 94
>gi|44890463|gb|AAH66958.1| SFRS2 protein [Homo sapiens]
Length = 179
Score = 138 bits (347), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 64/77 (83%), Positives = 71/77 (92%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPP +EGM SLKVDNLTYRT+PD LRRVFE+ G VGD+YIPRDR+T+ESRGFAFV
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 61 RFFDKRDAEDALDAMDG 77
RF DKRDAEDA+DAMDG
Sbjct: 61 RFHDKRDAEDAMDAMDG 77
>gi|256092428|ref|XP_002581939.1| serine/arginine rich splicing factor [Schistosoma mansoni]
gi|226481905|emb|CAX79218.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|353230937|emb|CCD77354.1| putative serine/arginine rich splicing factor [Schistosoma mansoni]
Length = 102
Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 70/99 (70%), Positives = 80/99 (80%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRF 62
YGR PPRI+GMVSLKVDNL YRTT DDLRRVF R GEVGDIYIPRD +T ESRGFAFVR+
Sbjct: 4 YGRSPPRIDGMVSLKVDNLAYRTTIDDLRRVFSRFGEVGDIYIPRDPYTFESRGFAFVRY 63
Query: 63 FDKRDAEDALDAMDGRMLDGRELRVQMARYGRPPSSSRS 101
R+A+ A+ MDG +DGRE+RVQ A+YGRP + RS
Sbjct: 64 CTDREADCAIRGMDGHKVDGREVRVQRAKYGRPTPNRRS 102
>gi|449283101|gb|EMC89804.1| Splicing factor, arginine/serine-rich 2 [Columba livia]
Length = 182
Score = 137 bits (345), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 64/79 (81%), Positives = 72/79 (91%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPP +EGM SLKVDNLTYRT+PD LRRVFE+ G VGD+YIPRDR+T+ESRGFAFV
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 61 RFFDKRDAEDALDAMDGRM 79
RF DKRDAEDA+DAMDG +
Sbjct: 61 RFHDKRDAEDAMDAMDGAV 79
>gi|226481931|emb|CAX79231.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
Length = 163
Score = 136 bits (343), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/93 (73%), Positives = 77/93 (82%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRF 62
YGR PPRI+GMVSLKVDNL YRTT DDLRRVF R GEVGDIYIPRD +T ESRGFAFVR+
Sbjct: 4 YGRSPPRIDGMVSLKVDNLAYRTTIDDLRRVFSRFGEVGDIYIPRDPYTFESRGFAFVRY 63
Query: 63 FDKRDAEDALDAMDGRMLDGRELRVQMARYGRP 95
R+A+ A+ MDG +DGRE+RVQ A+YGRP
Sbjct: 64 CTDREADCAIRGMDGHKVDGREVRVQRAKYGRP 96
>gi|256092430|ref|XP_002581940.1| serine/arginine rich splicing factor [Schistosoma mansoni]
gi|353230938|emb|CCD77355.1| putative serine/arginine rich splicing factor [Schistosoma
mansoni]
Length = 151
Score = 136 bits (343), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/93 (73%), Positives = 77/93 (82%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRF 62
YGR PPRI+GMVSLKVDNL YRTT DDLRRVF R GEVGDIYIPRD +T ESRGFAFVR+
Sbjct: 4 YGRSPPRIDGMVSLKVDNLAYRTTIDDLRRVFSRFGEVGDIYIPRDPYTFESRGFAFVRY 63
Query: 63 FDKRDAEDALDAMDGRMLDGRELRVQMARYGRP 95
R+A+ A+ MDG +DGRE+RVQ A+YGRP
Sbjct: 64 CTDREADCAIRGMDGHKVDGREVRVQRAKYGRP 96
>gi|3892187|gb|AAC78303.1| RNA-binding protein [Schistosoma japonicum]
gi|226476664|emb|CAX72224.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226476666|emb|CAX72225.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226476668|emb|CAX72226.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226476670|emb|CAX72227.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226476672|emb|CAX72228.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226476674|emb|CAX72229.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481907|emb|CAX79219.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481909|emb|CAX79220.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481911|emb|CAX79221.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481913|emb|CAX79222.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481915|emb|CAX79223.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481917|emb|CAX79224.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481919|emb|CAX79225.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481923|emb|CAX79227.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481925|emb|CAX79228.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481927|emb|CAX79229.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481929|emb|CAX79230.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481933|emb|CAX79232.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481935|emb|CAX79233.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481937|emb|CAX79234.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481939|emb|CAX79235.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481941|emb|CAX79236.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481943|emb|CAX79237.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481945|emb|CAX79238.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481947|emb|CAX79239.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481949|emb|CAX79240.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481951|emb|CAX79241.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481953|emb|CAX79242.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481955|emb|CAX79243.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481957|emb|CAX79244.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481959|emb|CAX79245.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481961|emb|CAX79246.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
Length = 151
Score = 136 bits (343), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/93 (73%), Positives = 77/93 (82%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRF 62
YGR PPRI+GMVSLKVDNL YRTT DDLRRVF R GEVGDIYIPRD +T ESRGFAFVR+
Sbjct: 4 YGRSPPRIDGMVSLKVDNLAYRTTIDDLRRVFSRFGEVGDIYIPRDPYTFESRGFAFVRY 63
Query: 63 FDKRDAEDALDAMDGRMLDGRELRVQMARYGRP 95
R+A+ A+ MDG +DGRE+RVQ A+YGRP
Sbjct: 64 CTDREADCAIRGMDGHKVDGREVRVQRAKYGRP 96
>gi|444520122|gb|ELV12918.1| Serine/arginine-rich splicing factor 2 [Tupaia chinensis]
Length = 361
Score = 136 bits (343), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 63/85 (74%), Positives = 74/85 (87%)
Query: 12 GMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDA 71
GM+SLKVDNLTYRT+PD LRRVFE+ G +GD+YIPRDRFT+ SRGFAFVRF+ K AEDA
Sbjct: 2 GMISLKVDNLTYRTSPDTLRRVFEKYGRIGDVYIPRDRFTKASRGFAFVRFYCKNHAEDA 61
Query: 72 LDAMDGRMLDGRELRVQMARYGRPP 96
LDA+DG +LDGR+LRVQMA + PP
Sbjct: 62 LDAVDGVVLDGRKLRVQMAYHDGPP 86
>gi|340372565|ref|XP_003384814.1| PREDICTED: serine/arginine-rich splicing factor 2-like
[Amphimedon queenslandica]
Length = 169
Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 59/83 (71%), Positives = 77/83 (92%)
Query: 13 MVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDAL 72
MVSLKVDNL++R TPD+++ +FE+ GEVGDIYIPRD +T+ESRGFAFVRF++KRDAEDA+
Sbjct: 1 MVSLKVDNLSFRMTPDEIKPIFEKYGEVGDIYIPRDPYTKESRGFAFVRFYEKRDAEDAM 60
Query: 73 DAMDGRMLDGRELRVQMARYGRP 95
+ +DG ++DGRE+RVQ+ARYGRP
Sbjct: 61 ERLDGYVIDGREMRVQLARYGRP 83
>gi|358331785|dbj|GAA50546.1| serine/arginine-rich splicing factor 2 [Clonorchis sinensis]
Length = 340
Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 67/95 (70%), Positives = 78/95 (82%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRF 62
Y + PPRIEGMVSLKVDNL YRTT +DLRRVF R GEVGD+YIPRD +T ESRGFAFVR+
Sbjct: 4 YAKSPPRIEGMVSLKVDNLAYRTTIEDLRRVFSRYGEVGDVYIPRDPYTFESRGFAFVRY 63
Query: 63 FDKRDAEDALDAMDGRMLDGRELRVQMARYGRPPS 97
R+A+ A+ MDGR +DGRE+RVQ A+YGRP S
Sbjct: 64 PTDREADSAIREMDGRRIDGREIRVQRAKYGRPNS 98
>gi|256092432|ref|XP_002581941.1| serine/arginine rich splicing factor [Schistosoma mansoni]
gi|353230939|emb|CCD77356.1| putative serine/arginine rich splicing factor [Schistosoma mansoni]
Length = 102
Score = 136 bits (342), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 69/98 (70%), Positives = 79/98 (80%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRF 62
YGR PPRI+GMVSLKVDNL YRTT DDLRRVF R GEVGDIYIPRD +T ESRGFAFVR+
Sbjct: 4 YGRSPPRIDGMVSLKVDNLAYRTTIDDLRRVFSRFGEVGDIYIPRDPYTFESRGFAFVRY 63
Query: 63 FDKRDAEDALDAMDGRMLDGRELRVQMARYGRPPSSSR 100
R+A+ A+ MDG +DGRE+RVQ A+YGRP + R
Sbjct: 64 CTDREADCAIRGMDGHKVDGREVRVQRAKYGRPTPNRR 101
>gi|397516519|ref|XP_003828475.1| PREDICTED: uncharacterized protein LOC100992382 [Pan paniscus]
Length = 384
Score = 135 bits (341), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 62/88 (70%), Positives = 73/88 (82%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MS GRPPP ++GM++LKVDNLTYRT+PD LRRVFE+ G VGD+YIPR+ T+ RGFAFV
Sbjct: 147 MSCGRPPPDVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFV 206
Query: 61 RFFDKRDAEDALDAMDGRMLDGRELRVQ 88
RF D+RDA+DA AMDG LDGRELRV
Sbjct: 207 RFHDRRDAQDAEAAMDGAELDGRELRVH 234
>gi|170579742|ref|XP_001894964.1| ADP-ribose pyrophosphatase, mitochondrial precursor [Brugia malayi]
gi|158598261|gb|EDP36190.1| ADP-ribose pyrophosphatase, mitochondrial precursor, putative
[Brugia malayi]
Length = 401
Score = 135 bits (341), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 62/98 (63%), Positives = 81/98 (82%), Gaps = 1/98 (1%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKR 66
PP I+G+ SLK+DN++Y+T P DLRR+FE+ GE+GDI+IPRDR+T++S+GF FVRF+ +R
Sbjct: 283 PPSIDGLYSLKIDNISYQTAPQDLRRLFEKYGEIGDIHIPRDRYTKQSKGFGFVRFYSRR 342
Query: 67 DAEDALDAMDGRMLDGRELRVQMARYGRPPSSSRSRGG 104
DAE A+D MDGR +DGRE+RV MARY R P RSR G
Sbjct: 343 DAEYAMDRMDGRWVDGREIRVAMARYER-PIDERSRNG 379
>gi|393910359|gb|EJD75841.1| hypothetical protein LOAG_17093 [Loa loa]
Length = 203
Score = 135 bits (340), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 58/89 (65%), Positives = 77/89 (86%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKR 66
PP I+G+ SLK+DN++Y+T P DLRR+FE+ GE+GDI+IPRDR+T++S+GF FVRF+ +R
Sbjct: 7 PPSIDGLYSLKIDNISYQTAPQDLRRLFEKYGEIGDIHIPRDRYTKQSKGFGFVRFYSRR 66
Query: 67 DAEDALDAMDGRMLDGRELRVQMARYGRP 95
DAE A+D MDGR +DGRE+RV MARY RP
Sbjct: 67 DAEYAMDRMDGRWVDGREIRVAMARYERP 95
>gi|226481921|emb|CAX79226.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
Length = 151
Score = 135 bits (339), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 68/93 (73%), Positives = 76/93 (81%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRF 62
YGR PPRI+GMVSLKVDNL YRTT DDLRRVF R GEVGDIYIPRD T ESRGFAFVR+
Sbjct: 4 YGRSPPRIDGMVSLKVDNLAYRTTIDDLRRVFSRFGEVGDIYIPRDPCTFESRGFAFVRY 63
Query: 63 FDKRDAEDALDAMDGRMLDGRELRVQMARYGRP 95
R+A+ A+ MDG +DGRE+RVQ A+YGRP
Sbjct: 64 CTDREADCAIRGMDGHKVDGREVRVQRAKYGRP 96
>gi|432113367|gb|ELK35779.1| Serine/arginine-rich splicing factor 2 [Myotis davidii]
Length = 218
Score = 134 bits (336), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 62/75 (82%), Positives = 69/75 (92%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPP +EGM SLKVDNLTYRT+PD LRRVFE+ G VGD+YIPRDR+T+ESRGFAFV
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 61 RFFDKRDAEDALDAM 75
RF DKRDAEDA+DAM
Sbjct: 61 RFHDKRDAEDAMDAM 75
>gi|324510397|gb|ADY44347.1| Splicing factor, arginine/serine-rich 4 [Ascaris suum]
gi|324520781|gb|ADY47708.1| Splicing factor, arginine/serine-rich 4 [Ascaris suum]
Length = 122
Score = 132 bits (332), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 57/89 (64%), Positives = 78/89 (87%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKR 66
PP I+G+ SLK+DN++Y+TTP DLRR+FE+ GE+GDI+IPRDR+T++S+GF FVR++ +R
Sbjct: 7 PPSIDGLYSLKIDNISYQTTPQDLRRLFEKYGEIGDIHIPRDRYTKQSKGFGFVRYYSRR 66
Query: 67 DAEDALDAMDGRMLDGRELRVQMARYGRP 95
DAE A+D MDGR +DGRE+RV +ARY RP
Sbjct: 67 DAEYAMDRMDGRWIDGREIRVALARYERP 95
>gi|268531152|ref|XP_002630702.1| C. briggsae CBR-RSP-4 protein [Caenorhabditis briggsae]
Length = 195
Score = 132 bits (331), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 57/91 (62%), Positives = 79/91 (86%)
Query: 5 RPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFD 64
R P I G+ SLK+DNL+Y+TTP+DLRRVFER G++GD++IPRD+++R+S+GF FVRF++
Sbjct: 9 RAAPDINGLTSLKIDNLSYQTTPNDLRRVFERYGDIGDVHIPRDKYSRQSKGFGFVRFYE 68
Query: 65 KRDAEDALDAMDGRMLDGRELRVQMARYGRP 95
+RDAE ALD DG+++DGRELRV +A+Y RP
Sbjct: 69 RRDAEHALDRTDGKLVDGRELRVTLAKYDRP 99
>gi|159164254|pdb|2DNM|A Chain A, Solution Structure Of Rna Binding Domain In Srp46
Splicing Factor
Length = 103
Score = 131 bits (330), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 64/93 (68%), Positives = 76/93 (81%)
Query: 2 SYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
S G P ++GM++LKVDNLTYRT+PD LRRVFE+ G VGD+YIPR+ T+ RGFAFVR
Sbjct: 2 SSGSSGPDVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVR 61
Query: 62 FFDKRDAEDALDAMDGRMLDGRELRVQMARYGR 94
F D+RDA+DA AMDG LDGRELRVQ+ARYGR
Sbjct: 62 FHDRRDAQDAEAAMDGAELDGRELRVQVARYGR 94
>gi|380791457|gb|AFE67604.1| serine/arginine-rich splicing factor 8, partial [Macaca mulatta]
Length = 86
Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 62/86 (72%), Positives = 73/86 (84%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MS GRPPP ++GM++LKVDNLTYRT+PD LRRVFE+ G VGD+YIPR+ T+ RGFAFV
Sbjct: 1 MSCGRPPPDVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREHHTKAPRGFAFV 60
Query: 61 RFFDKRDAEDALDAMDGRMLDGRELR 86
RF ++RDAEDA DAMDG LDGRELR
Sbjct: 61 RFHNRRDAEDAEDAMDGAELDGRELR 86
>gi|17532817|ref|NP_495013.1| Protein RSP-4, isoform a [Caenorhabditis elegans]
gi|3929375|sp|Q09511.1|RSP4_CAEEL RecName: Full=Probable splicing factor, arginine/serine-rich 4;
AltName: Full=CeSC35; AltName: Full=RNA-binding protein
srp-2
gi|351060987|emb|CCD68734.1| Protein RSP-4, isoform a [Caenorhabditis elegans]
Length = 196
Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 56/91 (61%), Positives = 78/91 (85%)
Query: 5 RPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFD 64
R P I G+ SLK+DNL+Y+TTP+DLRR FER G++GD++IPRD+++R+S+GF FVRF++
Sbjct: 10 RAAPDINGLTSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYE 69
Query: 65 KRDAEDALDAMDGRMLDGRELRVQMARYGRP 95
+RDAE ALD DG+++DGRELRV +A+Y RP
Sbjct: 70 RRDAEHALDRTDGKLVDGRELRVTLAKYDRP 100
>gi|17532819|ref|NP_495014.1| Protein RSP-4, isoform b [Caenorhabditis elegans]
gi|351060988|emb|CCD68735.1| Protein RSP-4, isoform b [Caenorhabditis elegans]
Length = 126
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 56/91 (61%), Positives = 78/91 (85%)
Query: 5 RPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFD 64
R P I G+ SLK+DNL+Y+TTP+DLRR FER G++GD++IPRD+++R+S+GF FVRF++
Sbjct: 10 RAAPDINGLTSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYE 69
Query: 65 KRDAEDALDAMDGRMLDGRELRVQMARYGRP 95
+RDAE ALD DG+++DGRELRV +A+Y RP
Sbjct: 70 RRDAEHALDRTDGKLVDGRELRVTLAKYDRP 100
>gi|14141216|gb|AAK54351.1| SRp46 splicing factor [Homo sapiens]
Length = 272
Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 61/84 (72%), Positives = 72/84 (85%)
Query: 11 EGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAED 70
+GM++LKVDNLTYRT+PD LRRVFE+ G VGD+YIPR+ T+ RGFAFVRF D+RDA+D
Sbjct: 1 DGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRRDAQD 60
Query: 71 ALDAMDGRMLDGRELRVQMARYGR 94
A AMDG LDGRELRVQ+ARYGR
Sbjct: 61 AEAAMDGAELDGRELRVQVARYGR 84
>gi|308493715|ref|XP_003109047.1| CRE-RSP-4 protein [Caenorhabditis remanei]
gi|308247604|gb|EFO91556.1| CRE-RSP-4 protein [Caenorhabditis remanei]
Length = 199
Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 56/91 (61%), Positives = 79/91 (86%)
Query: 5 RPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFD 64
R P I G+ SLK+DNL+Y+TTP+DLRRVF+R G++GD++IPRD+++R+S+GF FVRF++
Sbjct: 9 RAAPDINGLTSLKIDNLSYQTTPNDLRRVFDRYGDIGDVHIPRDKYSRQSKGFGFVRFYE 68
Query: 65 KRDAEDALDAMDGRMLDGRELRVQMARYGRP 95
+RDAE ALD DG+++DGRELRV +A+Y RP
Sbjct: 69 RRDAEHALDRTDGKLVDGRELRVTLAKYDRP 99
>gi|341895771|gb|EGT51706.1| hypothetical protein CAEBREN_26166 [Caenorhabditis brenneri]
gi|341900371|gb|EGT56306.1| hypothetical protein CAEBREN_17888 [Caenorhabditis brenneri]
Length = 200
Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 56/91 (61%), Positives = 78/91 (85%)
Query: 5 RPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFD 64
R P I G+ SLK+DNL+Y+TTP+DLRRVFER G++GD++IPRD+++R+S+GF FVRF++
Sbjct: 9 RAAPDIGGLTSLKIDNLSYQTTPNDLRRVFERYGDIGDVHIPRDKYSRQSKGFGFVRFYE 68
Query: 65 KRDAEDALDAMDGRMLDGRELRVQMARYGRP 95
+RDAE A+D DG+ +DGRELRV +A+Y RP
Sbjct: 69 RRDAEHAMDRTDGKNVDGRELRVTLAKYDRP 99
>gi|403308741|ref|XP_003944810.1| PREDICTED: uncharacterized protein LOC101031882, partial [Saimiri
boliviensis boliviensis]
Length = 346
Score = 125 bits (315), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 57/81 (70%), Positives = 67/81 (82%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MS GRPPP ++GM++LKVDNLTYRT+PD LRRVFE+ G VGD+YIPR+ T+ RGFAFV
Sbjct: 107 MSCGRPPPDVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFV 166
Query: 61 RFFDKRDAEDALDAMDGRMLD 81
RF D+RDAEDA AMDG LD
Sbjct: 167 RFHDQRDAEDAEAAMDGAELD 187
>gi|196000460|ref|XP_002110098.1| hypothetical protein TRIADDRAFT_17694 [Trichoplax adhaerens]
gi|190588222|gb|EDV28264.1| hypothetical protein TRIADDRAFT_17694, partial [Trichoplax
adhaerens]
Length = 89
Score = 125 bits (313), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 60/88 (68%), Positives = 73/88 (82%), Gaps = 1/88 (1%)
Query: 8 PRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRD 67
P I M SLKVDN+TYRTT DDL+R+F++ GE+GD+YIPRDR ESRG+AFVR+ D+RD
Sbjct: 1 PEISSMTSLKVDNITYRTTVDDLKRIFDKYGEIGDVYIPRDR-RGESRGYAFVRYHDRRD 59
Query: 68 AEDALDAMDGRMLDGRELRVQMARYGRP 95
AEDA+D + G+ DGRELRV MARYGRP
Sbjct: 60 AEDAMDCVHGKNFDGRELRVVMARYGRP 87
>gi|313242082|emb|CBY34259.1| unnamed protein product [Oikopleura dioica]
Length = 186
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/92 (65%), Positives = 74/92 (80%), Gaps = 1/92 (1%)
Query: 4 GRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFF 63
GRPPP I GM SLK+DNL+YRT + LRR F + GE+GD+YIP+D++ ESRGFAFVRF
Sbjct: 3 GRPPPNIGGMTSLKIDNLSYRTDSESLRRKFSKYGEIGDVYIPKDKYG-ESRGFAFVRFH 61
Query: 64 DKRDAEDALDAMDGRMLDGRELRVQMARYGRP 95
DKRDA DA+D +DGR +DGRE+RV AR+ RP
Sbjct: 62 DKRDAGDAIDQLDGRDIDGREIRVDYARHERP 93
>gi|313227248|emb|CBY22395.1| unnamed protein product [Oikopleura dioica]
Length = 186
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/92 (65%), Positives = 74/92 (80%), Gaps = 1/92 (1%)
Query: 4 GRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFF 63
GRPPP I GM SLK+DNL+YRT + LRR F + GE+GD+YIP+D++ ESRGFAFVRF
Sbjct: 3 GRPPPNIGGMTSLKIDNLSYRTDSESLRRKFSKYGEIGDVYIPKDKYG-ESRGFAFVRFH 61
Query: 64 DKRDAEDALDAMDGRMLDGRELRVQMARYGRP 95
DKRDA DA+D +DGR +DGRE+RV AR+ RP
Sbjct: 62 DKRDAGDAIDQLDGRDIDGREIRVDYARHERP 93
>gi|298707093|emb|CBJ29885.1| splicing factor, arginine/serine-rich 2 (SC-35), isoform CRA_a
[Ectocarpus siliculosus]
Length = 289
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 58/92 (63%), Positives = 72/92 (78%)
Query: 4 GRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFF 63
G PP IEGMV+LKVDN+ Y ++ DDLRR+FE+ GE+GD+Y+PRD T E RGFAFVRF
Sbjct: 17 GNGPPNIEGMVTLKVDNVPYNSSIDDLRRIFEKYGELGDVYMPRDLRTGEPRGFAFVRFM 76
Query: 64 DKRDAEDALDAMDGRMLDGRELRVQMARYGRP 95
D+RDA+DA+D MDG GRELR+Q A+ RP
Sbjct: 77 DQRDADDAIDRMDGEFFAGRELRIQYAKKRRP 108
>gi|119609850|gb|EAW89444.1| splicing factor, arginine/serine-rich 2, isoform CRA_e [Homo
sapiens]
Length = 78
Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 58/71 (81%), Positives = 64/71 (90%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPP +EGM SLKVDNLTYRT+PD LRRVFE+ G VGD+YIPRDR+T+ESRGFAFV
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 61 RFFDKRDAEDA 71
RF DKRDAED
Sbjct: 61 RFHDKRDAEDV 71
>gi|313228380|emb|CBY23531.1| unnamed protein product [Oikopleura dioica]
gi|313241505|emb|CBY33754.1| unnamed protein product [Oikopleura dioica]
Length = 201
Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/91 (63%), Positives = 71/91 (78%), Gaps = 1/91 (1%)
Query: 5 RPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFD 64
RPPP I GM SLK+DNL+YRT + LRR F + GE+GD+YIP+D+ ESRGFAFVRF D
Sbjct: 4 RPPPDIGGMTSLKIDNLSYRTDAESLRRTFSKFGEIGDVYIPKDKHG-ESRGFAFVRFHD 62
Query: 65 KRDAEDALDAMDGRMLDGRELRVQMARYGRP 95
KRDA DA+D + G+ LDGRE+RV AR+ RP
Sbjct: 63 KRDAGDAIDDLAGKDLDGREIRVDYARHERP 93
>gi|189502900|gb|ACE06831.1| unknown [Schistosoma japonicum]
Length = 138
Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 60/83 (72%), Positives = 68/83 (81%)
Query: 13 MVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDAL 72
MVSLKVDNL YRTT DDLRRVF R GEVGDIYIPRD +T ESRGFAFVR+ R+A+ A+
Sbjct: 1 MVSLKVDNLAYRTTIDDLRRVFSRFGEVGDIYIPRDPYTFESRGFAFVRYCTDREADCAI 60
Query: 73 DAMDGRMLDGRELRVQMARYGRP 95
MDG +DGRE+RVQ A+YGRP
Sbjct: 61 RGMDGHKVDGREVRVQRAKYGRP 83
>gi|395841993|ref|XP_003793806.1| PREDICTED: uncharacterized protein LOC100943026 [Otolemur
garnettii]
Length = 308
Score = 118 bits (295), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 64/120 (53%), Positives = 81/120 (67%), Gaps = 3/120 (2%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSY RP + E M S+KV+NLTY T+ LRR+FE+ G + D+YIPRDR T ESRGFAF+
Sbjct: 1 MSYSRPL-KGEVMTSIKVNNLTYHTSSYTLRRMFEKYGPIDDVYIPRDRLTNESRGFAFI 59
Query: 61 RFFDKRDAEDALDAMDGRMLDGRELRVQMARYGRPPSSSR--SRGGRDRDRRRDRSRSRD 118
RF K AEDAL A+DG +LDG EL+VQ+A P + S GR R +RSRS++
Sbjct: 60 RFCYKHHAEDALGALDGILLDGHELQVQLAHCACPLELCQGPSELGRGRGPGCNRSRSQE 119
>gi|193787706|dbj|BAG53419.1| unnamed protein product [Homo sapiens]
Length = 199
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/66 (81%), Positives = 60/66 (90%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPP +EGM SLKVDNLTYRT+PD LRRVFE+ G VGD+YIPRDR+T+ESRGFAFV
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 61 RFFDKR 66
RF DKR
Sbjct: 61 RFHDKR 66
>gi|354502929|ref|XP_003513534.1| PREDICTED: hypothetical protein LOC100763629 [Cricetulus griseus]
Length = 1084
Score = 115 bits (288), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 56/126 (44%), Positives = 79/126 (62%), Gaps = 3/126 (2%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSY P P ++GM SLKVDNL T+ L+R+FE G VGD+YI + T E GFAF+
Sbjct: 1 MSYSDPLPNVKGMTSLKVDNLANHTSSSTLKRLFEEYGPVGDVYIAPNHLTEERYGFAFI 60
Query: 61 RFFDKRDAEDALDAMDGRMLDGRELRVQMARYGRP--PSSSRSRGGRDRDRRRDRSRSRD 118
F +K DA++A+DA++G +LDG +LRVQM P S ++GG+ + D S+
Sbjct: 61 HFLNKHDAKNAMDALNGILLDGCKLRVQMMHKDDPRYTQSDSTQGGQHQ-YEEDNHESQS 119
Query: 119 RRYTRS 124
+ +TRS
Sbjct: 120 QSHTRS 125
>gi|301096303|ref|XP_002897249.1| mannitol dehydrogenase, putative [Phytophthora infestans T30-4]
gi|262107334|gb|EEY65386.1| mannitol dehydrogenase, putative [Phytophthora infestans T30-4]
Length = 543
Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 50/89 (56%), Positives = 68/89 (76%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKR 66
PP ++ M +LKVDN+ ++ D+LR +F + GE+GD+YIPR R + ESRGFAFVRF +KR
Sbjct: 350 PPNVDSMFTLKVDNVPFQIGSDELRDLFSKFGEIGDVYIPRARGSNESRGFAFVRFIEKR 409
Query: 67 DAEDALDAMDGRMLDGRELRVQMARYGRP 95
DAEDA+D M+G+ GR+LRVQ A+ RP
Sbjct: 410 DAEDAIDGMEGQEFQGRDLRVQFAKQRRP 438
>gi|193785174|dbj|BAG54327.1| unnamed protein product [Homo sapiens]
Length = 122
Score = 108 bits (271), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 50/61 (81%), Positives = 56/61 (91%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MSYGRPPP +EGM SLKVDNLTYRT+PD LRRVFE+ G VGD+YIPRDR+T+ESRGFAFV
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 61 R 61
R
Sbjct: 61 R 61
>gi|299115545|emb|CBN75749.1| serine/arginine rich splicing factor, putative [Ectocarpus
siliculosus]
Length = 308
Score = 108 bits (271), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 65/83 (78%)
Query: 13 MVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDAL 72
MV+LKVDN+ + +P++LR VFE CG++GD+YIPRD T E RGFAFVR+ DKRDA+ A+
Sbjct: 1 MVTLKVDNIAFTCSPEELREVFEGCGKLGDVYIPRDMRTGEPRGFAFVRYLDKRDADYAV 60
Query: 73 DAMDGRMLDGRELRVQMARYGRP 95
D +DG +GRELR+Q AR RP
Sbjct: 61 DRLDGTRFNGRELRIQYARKRRP 83
>gi|195147602|ref|XP_002014768.1| GL18771 [Drosophila persimilis]
gi|194106721|gb|EDW28764.1| GL18771 [Drosophila persimilis]
Length = 72
Score = 108 bits (270), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 50/55 (90%), Positives = 53/55 (96%)
Query: 5 RPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAF 59
RPPPRI+GMVSLKVDNLTYRTTP+DLRRVFERCGEVGDIYIPRDR+TRESRG F
Sbjct: 14 RPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGLCF 68
>gi|293675|gb|AAA39332.1| IFN-response element binding factor 2, partial [Mus musculus]
Length = 277
Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 47/58 (81%), Positives = 53/58 (91%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFA 58
MSYGRPPP +EGM SLKVDNLTYRT+PD LRRVFE+ G VGD+YIPRDR+T+ESRGFA
Sbjct: 47 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFA 104
>gi|348671618|gb|EGZ11439.1| hypothetical protein PHYSODRAFT_435859 [Phytophthora sojae]
Length = 92
Score = 105 bits (262), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 48/88 (54%), Positives = 67/88 (76%)
Query: 8 PRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRD 67
P ++ M +LKVDN+ ++ D+LR +F + GE+GD+YIPR R + ESRGFAFVRF +KRD
Sbjct: 1 PNVDNMFTLKVDNVPFQIGSDELRDLFSKFGEIGDVYIPRARGSNESRGFAFVRFMEKRD 60
Query: 68 AEDALDAMDGRMLDGRELRVQMARYGRP 95
AEDA++ M+G+ GR+LRVQ A+ RP
Sbjct: 61 AEDAIEGMEGQEFQGRDLRVQFAKQRRP 88
>gi|218200049|gb|EEC82476.1| hypothetical protein OsI_26921 [Oryza sativa Indica Group]
Length = 271
Score = 105 bits (262), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 54/99 (54%), Positives = 72/99 (72%), Gaps = 2/99 (2%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKR 66
PP I SL V N+T+RTT DDL +FE+ GEV DIYIPRDR T +SRGFAFVR+ +
Sbjct: 9 PPPIRDTYSLLVLNITFRTTADDLSPLFEKYGEVVDIYIPRDRRTGDSRGFAFVRYKYED 68
Query: 67 DAEDALDAMDGRMLDGRELRVQMARYGRPPSSSRSRGGR 105
+A+ A+D +DGR++DGRE+ VQ A+YG P++ R G+
Sbjct: 69 EAQKAVDRLDGRVVDGREIMVQFAKYG--PNAERIHKGK 105
>gi|226530532|ref|NP_001140562.1| uncharacterized protein LOC100272627 [Zea mays]
gi|194699996|gb|ACF84082.1| unknown [Zea mays]
gi|414590932|tpg|DAA41503.1| TPA: hypothetical protein ZEAMMB73_776046 [Zea mays]
Length = 251
Score = 105 bits (262), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 54/100 (54%), Positives = 73/100 (73%), Gaps = 2/100 (2%)
Query: 6 PPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDK 65
PPP I SL V N+T+RTT DDL +F++ GE+ DIYIPRDR T +SRGFAFVR+ +
Sbjct: 9 PPPPIRDTYSLLVLNITFRTTADDLFPLFDKYGEIVDIYIPRDRRTGDSRGFAFVRYKYE 68
Query: 66 RDAEDALDAMDGRMLDGRELRVQMARYGRPPSSSRSRGGR 105
+A+ A+D +DGR++DGRE+ VQ A+YG P++ R GR
Sbjct: 69 DEAQKAVDRLDGRLVDGREIMVQFAKYG--PNAERINKGR 106
>gi|115473447|ref|NP_001060322.1| Os07g0623300 [Oryza sativa Japonica Group]
gi|33146621|dbj|BAC79909.1| putative splicing factor, arginine/serine-rich 2 (Splicing factor
SC35) [Oryza sativa Japonica Group]
gi|113611858|dbj|BAF22236.1| Os07g0623300 [Oryza sativa Japonica Group]
gi|215687327|dbj|BAG91873.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222637485|gb|EEE67617.1| hypothetical protein OsJ_25178 [Oryza sativa Japonica Group]
Length = 275
Score = 105 bits (262), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 54/99 (54%), Positives = 72/99 (72%), Gaps = 2/99 (2%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKR 66
PP I SL V N+T+RTT DDL +FE+ GEV DIYIPRDR T +SRGFAFVR+ +
Sbjct: 9 PPPIRDTYSLLVLNITFRTTADDLSPLFEKYGEVVDIYIPRDRRTGDSRGFAFVRYKYED 68
Query: 67 DAEDALDAMDGRMLDGRELRVQMARYGRPPSSSRSRGGR 105
+A+ A+D +DGR++DGRE+ VQ A+YG P++ R G+
Sbjct: 69 EAQKAVDRLDGRVVDGREIMVQFAKYG--PNAERIHKGK 105
>gi|194708586|gb|ACF88377.1| unknown [Zea mays]
gi|414590930|tpg|DAA41501.1| TPA: hypothetical protein ZEAMMB73_776046 [Zea mays]
gi|414590931|tpg|DAA41502.1| TPA: hypothetical protein ZEAMMB73_776046 [Zea mays]
Length = 238
Score = 105 bits (262), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 54/100 (54%), Positives = 73/100 (73%), Gaps = 2/100 (2%)
Query: 6 PPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDK 65
PPP I SL V N+T+RTT DDL +F++ GE+ DIYIPRDR T +SRGFAFVR+ +
Sbjct: 9 PPPPIRDTYSLLVLNITFRTTADDLFPLFDKYGEIVDIYIPRDRRTGDSRGFAFVRYKYE 68
Query: 66 RDAEDALDAMDGRMLDGRELRVQMARYGRPPSSSRSRGGR 105
+A+ A+D +DGR++DGRE+ VQ A+YG P++ R GR
Sbjct: 69 DEAQKAVDRLDGRLVDGREIMVQFAKYG--PNAERINKGR 106
>gi|238011430|gb|ACR36750.1| unknown [Zea mays]
gi|414590933|tpg|DAA41504.1| TPA: hypothetical protein ZEAMMB73_776046 [Zea mays]
gi|414590934|tpg|DAA41505.1| TPA: hypothetical protein ZEAMMB73_776046 [Zea mays]
Length = 190
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/100 (54%), Positives = 73/100 (73%), Gaps = 2/100 (2%)
Query: 6 PPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDK 65
PPP I SL V N+T+RTT DDL +F++ GE+ DIYIPRDR T +SRGFAFVR+ +
Sbjct: 9 PPPPIRDTYSLLVLNITFRTTADDLFPLFDKYGEIVDIYIPRDRRTGDSRGFAFVRYKYE 68
Query: 66 RDAEDALDAMDGRMLDGRELRVQMARYGRPPSSSRSRGGR 105
+A+ A+D +DGR++DGRE+ VQ A+YG P++ R GR
Sbjct: 69 DEAQKAVDRLDGRLVDGREIMVQFAKYG--PNAERINKGR 106
>gi|167518892|ref|XP_001743786.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163777748|gb|EDQ91364.1| predicted protein [Monosiga brevicollis MX1]
Length = 209
Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/100 (53%), Positives = 70/100 (70%), Gaps = 1/100 (1%)
Query: 4 GRPPP-RIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRF 62
GRPPP ++ M SLKVDN+T T D +R +F+ GE+GDIY+PRDR T SRGF FVRF
Sbjct: 3 GRPPPSNVDAMFSLKVDNITSDMTEDMMRDLFKDFGEIGDIYMPRDRNTNRSRGFCFVRF 62
Query: 63 FDKRDAEDALDAMDGRMLDGRELRVQMARYGRPPSSSRSR 102
+++ DA+ A + MDG +GR+L VQ A++GRP R R
Sbjct: 63 YEEADADKAAEKMDGHAFEGRDLIVQKAKFGRPQRERRGR 102
>gi|218192960|gb|EEC75387.1| hypothetical protein OsI_11855 [Oryza sativa Indica Group]
Length = 218
Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/187 (41%), Positives = 104/187 (55%), Gaps = 37/187 (19%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKR 66
PP + SL V N+++RTT DDL +F+RCGEV DI IPRDR T +SRGFAFVR+ +
Sbjct: 9 PPAVRDSYSLLVLNVSFRTTADDLLALFDRCGEVLDIRIPRDRRTGDSRGFAFVRYKYED 68
Query: 67 DAEDALDAMDGRMLDGRELRVQMARYGRPPSSSRSRGGR---DRDRRRDRSRS------- 116
+A+ A+D +DGR +DGR++ VQ A+YG P++ R GR + + R RSRS
Sbjct: 69 EAQKAVDKLDGRTVDGRDIMVQFAKYG--PNAERIHKGRIVEEISKPRGRSRSPSPKRRY 126
Query: 117 ----------------------RDRRYTRSRSFS--SRSRSGSKSP-RKARSKSIDRDNK 151
+DR Y RSRS R R K R++RS S D D +
Sbjct: 127 RADYRDRGYRDDYRDRHYRDDYQDREYRRSRSIERYERERYQEKGYRRRSRSISPDYDRR 186
Query: 152 HERNGRS 158
H +NG+S
Sbjct: 187 HRKNGQS 193
>gi|449450504|ref|XP_004143002.1| PREDICTED: uncharacterized protein LOC101216322 [Cucumis sativus]
Length = 257
Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/99 (53%), Positives = 72/99 (72%), Gaps = 2/99 (2%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKR 66
PP I SL V N+T+RTT DDL +F++ G+V D++IPRDR T +SRGFAFVR+
Sbjct: 9 PPDIRDTYSLLVLNITFRTTADDLYPLFDKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
Query: 67 DAEDALDAMDGRMLDGRELRVQMARYGRPPSSSRSRGGR 105
+A+ A+D +DGRMLDGRE+ VQ A+YG P++ + R GR
Sbjct: 69 EAQKAIDKLDGRMLDGREIMVQFAKYG--PNAEKIRKGR 105
>gi|357121974|ref|XP_003562691.1| PREDICTED: uncharacterized protein LOC100826320 [Brachypodium
distachyon]
Length = 238
Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/99 (54%), Positives = 73/99 (73%), Gaps = 2/99 (2%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKR 66
PP I SL V N+T+RTT DDL +F++ GEV DIYIPRDR T +SRGFAFVR+ +
Sbjct: 9 PPPIRDTYSLLVLNITFRTTADDLFPLFDKYGEVVDIYIPRDRRTGDSRGFAFVRYKYED 68
Query: 67 DAEDALDAMDGRMLDGRELRVQMARYGRPPSSSRSRGGR 105
+A+ A+D +DGR++DGRE+ VQ A+YG P++ R + GR
Sbjct: 69 EAQKAVDRLDGRLVDGREMMVQFAKYG--PNAERIQKGR 105
>gi|392355653|ref|XP_003752097.1| PREDICTED: uncharacterized protein LOC317533 [Rattus norvegicus]
Length = 213
Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 81/147 (55%), Gaps = 5/147 (3%)
Query: 10 IEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAE 69
++GM LKV+NL Y T+ L+ +FE G VGD+++PR+ T E+ GFAF+ F++ DA+
Sbjct: 10 VDGMTCLKVENLAYHTSSYTLKLIFEDYGAVGDVFVPRNHLTEENYGFAFIHFYNNCDAK 69
Query: 70 DALDAMDGRMLDGRELRVQMAR----YGRPPSSSRSRGGRDRDRRRDRSRSRDRRYTRSR 125
DA+ + G +LDG +L+VQM + P R + + + R++ +
Sbjct: 70 DAMHGLHGILLDGNKLKVQMVHNDDLHYAQPDCGHGRQYHYEEENHELQKQYKRQHCSNT 129
Query: 126 SFSSRSRSGSKSPRKARSKSIDRDNKH 152
+RS+S SP + SKS ++ H
Sbjct: 130 RIQTRSQS-RLSPDNSESKSQSCNHSH 155
>gi|108708538|gb|ABF96333.1| Arginine/serine-rich splicing factor, putative, expressed [Oryza
sativa Japonica Group]
Length = 206
Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/186 (41%), Positives = 103/186 (55%), Gaps = 37/186 (19%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKR 66
PP + SL V N+++RTT DDL +F+RCGEV DI IPRDR T +SRGFAFVR+ +
Sbjct: 9 PPAVRDSYSLLVLNVSFRTTADDLLALFDRCGEVLDIRIPRDRRTGDSRGFAFVRYKYED 68
Query: 67 DAEDALDAMDGRMLDGRELRVQMARYGRPPSSSRSRGGR---DRDRRRDRSRS------- 116
+A+ A+D +DGR +DGR++ VQ A+YG P++ R GR + + R RSRS
Sbjct: 69 EAQKAVDKLDGRTVDGRDIMVQFAKYG--PNAERIHKGRIVEEISKPRGRSRSPSPKRRY 126
Query: 117 ----------------------RDRRYTRSRSFS--SRSRSGSKSP-RKARSKSIDRDNK 151
+DR Y RSRS R R K R++RS S D D +
Sbjct: 127 RADYRDRGYRDDYRDRHYRDDYQDREYRRSRSIERYERERYQEKGYRRRSRSISPDYDRR 186
Query: 152 HERNGR 157
H +NGR
Sbjct: 187 HRKNGR 192
>gi|293334639|ref|NP_001169755.1| uncharacterized protein LOC100383636 [Zea mays]
gi|224031469|gb|ACN34810.1| unknown [Zea mays]
gi|414887660|tpg|DAA63674.1| TPA: hypothetical protein ZEAMMB73_707044 [Zea mays]
gi|414887661|tpg|DAA63675.1| TPA: hypothetical protein ZEAMMB73_707044 [Zea mays]
Length = 246
Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/100 (53%), Positives = 73/100 (73%), Gaps = 2/100 (2%)
Query: 6 PPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDK 65
PPP I SL V N+T+RTT DDL +F++ GE+ DIYIPRDR T +SRGFAFVR+ +
Sbjct: 9 PPPPIRDTYSLLVLNITFRTTADDLFPLFDKYGEIVDIYIPRDRRTGDSRGFAFVRYKYE 68
Query: 66 RDAEDALDAMDGRMLDGRELRVQMARYGRPPSSSRSRGGR 105
+A+ A++ +DGR++DGRE+ VQ A+YG P++ R GR
Sbjct: 69 DEAQKAVERLDGRLVDGREIMVQFAKYG--PNAERINKGR 106
>gi|118484490|gb|ABK94120.1| unknown [Populus trichocarpa]
Length = 302
Score = 103 bits (256), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 55/104 (52%), Positives = 75/104 (72%), Gaps = 3/104 (2%)
Query: 3 YGRP-PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
+GR PP I SL V N+T+RTT DDL +F++ G+V D++IPRDR T ESRGFAFVR
Sbjct: 4 FGRSGPPDIRDTFSLLVLNITFRTTADDLFPLFDKYGKVVDVFIPRDRRTGESRGFAFVR 63
Query: 62 FFDKRDAEDALDAMDGRMLDGRELRVQMARYGRPPSSSRSRGGR 105
+ +A+ A+D +DGR++DGRE+ VQ A+YG P++ R R GR
Sbjct: 64 YKYAEEAQKAVDRLDGRVVDGREIMVQFAKYG--PNAERIRSGR 105
>gi|414887662|tpg|DAA63676.1| TPA: hypothetical protein ZEAMMB73_707044 [Zea mays]
Length = 207
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 53/100 (53%), Positives = 73/100 (73%), Gaps = 2/100 (2%)
Query: 6 PPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDK 65
PPP I SL V N+T+RTT DDL +F++ GE+ DIYIPRDR T +SRGFAFVR+ +
Sbjct: 9 PPPPIRDTYSLLVLNITFRTTADDLFPLFDKYGEIVDIYIPRDRRTGDSRGFAFVRYKYE 68
Query: 66 RDAEDALDAMDGRMLDGRELRVQMARYGRPPSSSRSRGGR 105
+A+ A++ +DGR++DGRE+ VQ A+YG P++ R GR
Sbjct: 69 DEAQKAVERLDGRLVDGREIMVQFAKYG--PNAERINKGR 106
>gi|255090217|gb|ACU00434.1| RNA binding protein [Schistosoma japonicum]
Length = 70
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 51/69 (73%), Positives = 57/69 (82%)
Query: 4 GRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFF 63
GR PPRI GMVSLKVDNL Y+TT DDLRRVF R GEVGDIYIPRD +T ESRGFAFVR+
Sbjct: 1 GRSPPRIYGMVSLKVDNLVYKTTIDDLRRVFSRFGEVGDIYIPRDPYTFESRGFAFVRYC 60
Query: 64 DKRDAEDAL 72
R+A+ A+
Sbjct: 61 TDREADCAI 69
>gi|448878314|gb|AGE46120.1| arginine/serine-rich splicing factor SC30 transcript I [Sorghum
bicolor]
Length = 250
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 53/99 (53%), Positives = 72/99 (72%), Gaps = 2/99 (2%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKR 66
PP I SL V N+T+RTT DDL +F++ GE+ DIYIPRDR T +SRGFAFVR+ +
Sbjct: 9 PPPIRDTYSLLVLNITFRTTADDLFPLFDKYGEIVDIYIPRDRRTGDSRGFAFVRYKYED 68
Query: 67 DAEDALDAMDGRMLDGRELRVQMARYGRPPSSSRSRGGR 105
+A+ A+D +DGR++DGRE+ VQ A+YG P++ R GR
Sbjct: 69 EAQKAVDRLDGRLVDGREIMVQFAKYG--PNAERINKGR 105
>gi|344248945|gb|EGW05049.1| E3 ubiquitin-protein ligase RLIM [Cricetulus griseus]
Length = 767
Score = 102 bits (255), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 53/127 (41%), Positives = 78/127 (61%), Gaps = 5/127 (3%)
Query: 13 MVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDAL 72
M SLKVDNL T+ L+R+FE G VGD+YI + T E GFAF+ F +K DA++A+
Sbjct: 1 MTSLKVDNLANHTSSSTLKRLFEEYGPVGDVYIAPNHLTEERYGFAFIHFLNKHDAKNAM 60
Query: 73 DAMDGRMLDGRELRVQMARYGRP--PSSSRSRGGRDRDRRRDRSRSRDRRYTRSRSFSSR 130
DA++G +LDG +LRVQM P S ++GG+ + D S+ + +TRS
Sbjct: 61 DALNGILLDGCKLRVQMMHKDDPRYTQSDSTQGGQHQ-YEEDNHESQSQSHTRSS--PDN 117
Query: 131 SRSGSKS 137
S++G++S
Sbjct: 118 SQNGTQS 124
>gi|115453325|ref|NP_001050263.1| Os03g0388000 [Oryza sativa Japonica Group]
gi|50582745|gb|AAT78815.1| putative splicing factor (having alternative splicing products)
[Oryza sativa Japonica Group]
gi|108708536|gb|ABF96331.1| Arginine/serine-rich splicing factor, putative, expressed [Oryza
sativa Japonica Group]
gi|113548734|dbj|BAF12177.1| Os03g0388000 [Oryza sativa Japonica Group]
gi|222625042|gb|EEE59174.1| hypothetical protein OsJ_11097 [Oryza sativa Japonica Group]
Length = 205
Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/185 (41%), Positives = 102/185 (55%), Gaps = 37/185 (20%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKR 66
PP + SL V N+++RTT DDL +F+RCGEV DI IPRDR T +SRGFAFVR+ +
Sbjct: 9 PPAVRDSYSLLVLNVSFRTTADDLLALFDRCGEVLDIRIPRDRRTGDSRGFAFVRYKYED 68
Query: 67 DAEDALDAMDGRMLDGRELRVQMARYGRPPSSSRSRGGR---DRDRRRDRSRS------- 116
+A+ A+D +DGR +DGR++ VQ A+YG P++ R GR + + R RSRS
Sbjct: 69 EAQKAVDKLDGRTVDGRDIMVQFAKYG--PNAERIHKGRIVEEISKPRGRSRSPSPKRRY 126
Query: 117 ----------------------RDRRYTRSRSFS--SRSRSGSKSP-RKARSKSIDRDNK 151
+DR Y RSRS R R K R++RS S D D +
Sbjct: 127 RADYRDRGYRDDYRDRHYRDDYQDREYRRSRSIERYERERYQEKGYRRRSRSISPDYDRR 186
Query: 152 HERNG 156
H +NG
Sbjct: 187 HRKNG 191
>gi|3334756|emb|CAA76346.1| putative arginine/serine-rich splicing factor [Medicago sativa
subsp. x varia]
Length = 286
Score = 102 bits (254), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 53/99 (53%), Positives = 71/99 (71%), Gaps = 2/99 (2%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKR 66
PP I SL V N+T+RTT DDL +F++ G+V DI+IP+DR T ESRGFAFVR+
Sbjct: 9 PPDISDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPKDRRTGESRGFAFVRYKYAD 68
Query: 67 DAEDALDAMDGRMLDGRELRVQMARYGRPPSSSRSRGGR 105
+A A+D +DGRM+DGRE+ VQ A+YG P++ R + GR
Sbjct: 69 EASKAVDRLDGRMVDGREITVQFAKYG--PNAERIQKGR 105
>gi|217073798|gb|ACJ85259.1| unknown [Medicago truncatula]
Length = 280
Score = 102 bits (253), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 53/99 (53%), Positives = 71/99 (71%), Gaps = 2/99 (2%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKR 66
PP I SL V N+T+RTT DDL +F++ G+V DI+IP+DR T ESRGFAFVR+
Sbjct: 9 PPDISDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPKDRRTGESRGFAFVRYKYAD 68
Query: 67 DAEDALDAMDGRMLDGRELRVQMARYGRPPSSSRSRGGR 105
+A A+D +DGRM+DGRE+ VQ A+YG P++ R + GR
Sbjct: 69 EASKAVDRLDGRMVDGREITVQFAKYG--PNAERIQKGR 105
>gi|357490717|ref|XP_003615646.1| Splicing factor, arginine/serine-rich [Medicago truncatula]
gi|217073250|gb|ACJ84984.1| unknown [Medicago truncatula]
gi|355516981|gb|AES98604.1| Splicing factor, arginine/serine-rich [Medicago truncatula]
Length = 267
Score = 102 bits (253), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 54/99 (54%), Positives = 70/99 (70%), Gaps = 2/99 (2%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKR 66
PP I SL V N+T+RTT DDL +F++ G+V DI+IPRDR T ESRGFAFVR+
Sbjct: 9 PPDIADTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGESRGFAFVRYKYAD 68
Query: 67 DAEDALDAMDGRMLDGRELRVQMARYGRPPSSSRSRGGR 105
+A A+D +DGRM+DGRE+ VQ A+YG P++ R GR
Sbjct: 69 EASKAVDRLDGRMVDGREITVQFAKYG--PNAERIHKGR 105
>gi|388519919|gb|AFK48021.1| unknown [Medicago truncatula]
Length = 281
Score = 101 bits (252), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 53/99 (53%), Positives = 71/99 (71%), Gaps = 2/99 (2%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKR 66
PP I SL V N+T+RTT DDL +F++ G+V DI+IP+DR T ESRGFAFVR+
Sbjct: 9 PPDISDTYSLLVLNVTFRTTADDLFPLFDKYGKVVDIFIPKDRRTGESRGFAFVRYKYAD 68
Query: 67 DAEDALDAMDGRMLDGRELRVQMARYGRPPSSSRSRGGR 105
+A A+D +DGRM+DGRE+ VQ A+YG P++ R + GR
Sbjct: 69 EASKAVDRLDGRMVDGREITVQFAKYG--PNAERIQKGR 105
>gi|225448281|ref|XP_002274860.1| PREDICTED: uncharacterized protein LOC100242306 [Vitis vinifera]
gi|296086805|emb|CBI32954.3| unnamed protein product [Vitis vinifera]
Length = 255
Score = 101 bits (252), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 53/99 (53%), Positives = 71/99 (71%), Gaps = 2/99 (2%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKR 66
PP I+ SL V N+T+RTT DDL F++ G+V DI+IPRDR T ESRGFAFVR+
Sbjct: 9 PPDIKDTFSLLVLNITFRTTADDLFPFFDKYGKVVDIFIPRDRRTGESRGFAFVRYKYAD 68
Query: 67 DAEDALDAMDGRMLDGRELRVQMARYGRPPSSSRSRGGR 105
+A+ A+D +DGR++DGRE+ VQ A+YG P++ R GR
Sbjct: 69 EAQKAVDRLDGRIVDGREITVQFAKYG--PNAERIHKGR 105
>gi|224066947|ref|XP_002302293.1| predicted protein [Populus trichocarpa]
gi|222844019|gb|EEE81566.1| predicted protein [Populus trichocarpa]
Length = 178
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/99 (53%), Positives = 72/99 (72%), Gaps = 2/99 (2%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKR 66
PP I SL V N+T+RTT DDL +F++ G+V D++IPRDR T ESRGFAFVR+
Sbjct: 9 PPDIRDTFSLLVLNITFRTTADDLFPLFDKYGKVVDVFIPRDRRTGESRGFAFVRYKYAD 68
Query: 67 DAEDALDAMDGRMLDGRELRVQMARYGRPPSSSRSRGGR 105
+A+ A+D +DGR++DGRE+ VQ A+YG P++ R R GR
Sbjct: 69 EAQKAVDRLDGRVVDGREIMVQFAKYG--PNAERIRDGR 105
>gi|356512057|ref|XP_003524737.1| PREDICTED: uncharacterized protein LOC100804370 [Glycine max]
Length = 267
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/99 (52%), Positives = 71/99 (71%), Gaps = 2/99 (2%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKR 66
PP I SL V N+T+RTT DDL +F++ G+V DI+IP+DR T ESRGFAFVR+
Sbjct: 9 PPDISDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPKDRRTGESRGFAFVRYKYAD 68
Query: 67 DAEDALDAMDGRMLDGRELRVQMARYGRPPSSSRSRGGR 105
+A+ A++ +DGRM+DGRE+ VQ A+YG P++ R GR
Sbjct: 69 EAQKAVERLDGRMVDGREITVQFAKYG--PNAERIHKGR 105
>gi|357490719|ref|XP_003615647.1| Splicing factor, arginine/serine-rich [Medicago truncatula]
gi|355516982|gb|AES98605.1| Splicing factor, arginine/serine-rich [Medicago truncatula]
Length = 140
Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/99 (54%), Positives = 70/99 (70%), Gaps = 2/99 (2%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKR 66
PP I SL V N+T+RTT DDL +F++ G+V DI+IPRDR T ESRGFAFVR+
Sbjct: 9 PPDIADTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGESRGFAFVRYKYAD 68
Query: 67 DAEDALDAMDGRMLDGRELRVQMARYGRPPSSSRSRGGR 105
+A A+D +DGRM+DGRE+ VQ A+YG P++ R GR
Sbjct: 69 EASKAVDRLDGRMVDGREITVQFAKYG--PNAERIHKGR 105
>gi|255642028|gb|ACU21281.1| unknown [Glycine max]
Length = 254
Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/99 (52%), Positives = 71/99 (71%), Gaps = 2/99 (2%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKR 66
PP I SL V N+T+RTT DDL +F++ G+V DI+IP+DR T ESRGFAFVR+
Sbjct: 9 PPDISDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPKDRRTGESRGFAFVRYKYAD 68
Query: 67 DAEDALDAMDGRMLDGRELRVQMARYGRPPSSSRSRGGR 105
+A+ A++ +DGRM+DGRE+ VQ A+YG P++ R GR
Sbjct: 69 EAQKAVERLDGRMVDGREITVQFAKYG--PNAERIHKGR 105
>gi|356524836|ref|XP_003531034.1| PREDICTED: uncharacterized protein LOC100778928 [Glycine max]
Length = 267
Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/99 (52%), Positives = 71/99 (71%), Gaps = 2/99 (2%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKR 66
PP I SL V N+T+RTT DDL +F++ G+V DI+IP+DR T ESRGFAFVR+
Sbjct: 9 PPDISDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPKDRRTGESRGFAFVRYKYAD 68
Query: 67 DAEDALDAMDGRMLDGRELRVQMARYGRPPSSSRSRGGR 105
+A+ A++ +DGRM+DGRE+ VQ A+YG P++ R GR
Sbjct: 69 EAQKAVERLDGRMVDGREITVQFAKYG--PNAERIHKGR 105
>gi|195621804|gb|ACG32732.1| splicing factor, arginine/serine-rich 2 [Zea mays]
Length = 260
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/87 (55%), Positives = 64/87 (73%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKR 66
PP I SL V N+++RTT DDL +FERCG+V D++IPRDR T +SRGFAFVR+
Sbjct: 9 PPDIRDTFSLLVLNISFRTTADDLFPLFERCGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
Query: 67 DAEDALDAMDGRMLDGRELRVQMARYG 93
+A+ A+D +DGR +DGR + VQ A+YG
Sbjct: 69 EAQKAIDRLDGRNVDGRNIMVQFAKYG 95
>gi|414869214|tpg|DAA47771.1| TPA: hypothetical protein ZEAMMB73_478975 [Zea mays]
Length = 254
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/87 (55%), Positives = 64/87 (73%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKR 66
PP I SL V N+++RTT DDL +FERCG+V D++IPRDR T +SRGFAFVR+
Sbjct: 9 PPDIRDTFSLLVLNISFRTTADDLFPLFERCGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
Query: 67 DAEDALDAMDGRMLDGRELRVQMARYG 93
+A+ A+D +DGR +DGR + VQ A+YG
Sbjct: 69 EAQKAIDRLDGRNVDGRNIMVQFAKYG 95
>gi|212275520|ref|NP_001130064.1| uncharacterized protein LOC100191156 [Zea mays]
gi|194688202|gb|ACF78185.1| unknown [Zea mays]
gi|414869215|tpg|DAA47772.1| TPA: splicing factor, arginine/serine-rich 2 [Zea mays]
gi|448878192|gb|AGE46059.1| arginine/serine-rich splicing factor SC32 transcript I [Zea mays]
Length = 256
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/87 (55%), Positives = 64/87 (73%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKR 66
PP I SL V N+++RTT DDL +FERCG+V D++IPRDR T +SRGFAFVR+
Sbjct: 9 PPDIRDTFSLLVLNISFRTTADDLFPLFERCGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
Query: 67 DAEDALDAMDGRMLDGRELRVQMARYG 93
+A+ A+D +DGR +DGR + VQ A+YG
Sbjct: 69 EAQKAIDRLDGRNVDGRNIMVQFAKYG 95
>gi|15237641|ref|NP_201225.1| splicing factor, arginine/serine-rich 2 [Arabidopsis thaliana]
gi|30697964|ref|NP_851261.1| splicing factor, arginine/serine-rich 2 [Arabidopsis thaliana]
gi|9759396|dbj|BAB09851.1| unnamed protein product [Arabidopsis thaliana]
gi|17380868|gb|AAL36246.1| unknown protein [Arabidopsis thaliana]
gi|21689657|gb|AAM67450.1| unknown protein [Arabidopsis thaliana]
gi|22022546|gb|AAM83231.1| AT5g64200/MSJ1_4 [Arabidopsis thaliana]
gi|23505861|gb|AAN28790.1| At5g64200/MSJ1_4 [Arabidopsis thaliana]
gi|332010470|gb|AED97853.1| splicing factor, arginine/serine-rich 2 [Arabidopsis thaliana]
gi|332010471|gb|AED97854.1| splicing factor, arginine/serine-rich 2 [Arabidopsis thaliana]
Length = 303
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/99 (50%), Positives = 70/99 (70%), Gaps = 2/99 (2%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKR 66
PP I SL V N+T+RTT DDL +F + G+V D++IPRDR T +SRGFAFVR+ K
Sbjct: 9 PPDISDTYSLLVLNITFRTTADDLYPLFAKYGKVVDVFIPRDRRTGDSRGFAFVRYKYKD 68
Query: 67 DAEDALDAMDGRMLDGRELRVQMARYGRPPSSSRSRGGR 105
+A A++ +DGR++DGRE+ VQ A+YG P++ + GR
Sbjct: 69 EAHKAVERLDGRVVDGREITVQFAKYG--PNAEKISKGR 105
>gi|297797433|ref|XP_002866601.1| hypothetical protein ARALYDRAFT_496619 [Arabidopsis lyrata subsp.
lyrata]
gi|297312436|gb|EFH42860.1| hypothetical protein ARALYDRAFT_496619 [Arabidopsis lyrata subsp.
lyrata]
Length = 305
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/99 (50%), Positives = 70/99 (70%), Gaps = 2/99 (2%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKR 66
PP I SL V N+T+RTT DDL +F + G+V D++IPRDR T +SRGFAFVR+ K
Sbjct: 9 PPDISDTYSLLVLNITFRTTADDLYPLFAKYGKVVDVFIPRDRRTGDSRGFAFVRYKYKD 68
Query: 67 DAEDALDAMDGRMLDGRELRVQMARYGRPPSSSRSRGGR 105
+A A++ +DGR++DGRE+ VQ A+YG P++ + GR
Sbjct: 69 EAHKAVERLDGRVVDGREITVQFAKYG--PNAEKISKGR 105
>gi|9843653|emb|CAC03600.1| splicing factor SC35 [Arabidopsis thaliana]
Length = 303
Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 50/99 (50%), Positives = 70/99 (70%), Gaps = 2/99 (2%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKR 66
PP I SL V N+T+RTT DDL +F + G+V D++IPRDR T +SRGFAFVR+ K
Sbjct: 9 PPDISDTYSLLVLNITFRTTADDLYPLFAKYGKVVDVFIPRDRRTGDSRGFAFVRYKYKD 68
Query: 67 DAEDALDAMDGRMLDGRELRVQMARYGRPPSSSRSRGGR 105
+A A++ +DGR++DGRE+ VQ A+YG P++ + GR
Sbjct: 69 EAHKAVERLDGRVVDGREITVQFAKYG--PNAEKISKGR 105
>gi|388505176|gb|AFK40654.1| unknown [Medicago truncatula]
Length = 267
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 53/99 (53%), Positives = 69/99 (69%), Gaps = 2/99 (2%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKR 66
PP I SL V N+T+RTT D L +F++ G+V DI+IPRDR T ESRGFAFVR+
Sbjct: 9 PPDIADTYSLLVLNITFRTTADGLFPLFDKYGKVVDIFIPRDRRTGESRGFAFVRYKYAD 68
Query: 67 DAEDALDAMDGRMLDGRELRVQMARYGRPPSSSRSRGGR 105
+A A+D +DGRM+DGRE+ VQ A+YG P++ R GR
Sbjct: 69 EASKAVDRLDGRMVDGREITVQFAKYG--PNAERIHKGR 105
>gi|255581357|ref|XP_002531488.1| serine/arginine rich splicing factor, putative [Ricinus communis]
gi|223528897|gb|EEF30895.1| serine/arginine rich splicing factor, putative [Ricinus communis]
Length = 257
Score = 98.2 bits (243), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 51/99 (51%), Positives = 71/99 (71%), Gaps = 2/99 (2%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKR 66
PP I SL V N+T+RTT DDL +F++ G+V DI+IPRDR T +SRGFAFVR+
Sbjct: 9 PPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYAD 68
Query: 67 DAEDALDAMDGRMLDGRELRVQMARYGRPPSSSRSRGGR 105
+A+ A++ +DGR++DGRE+ VQ A+YG P++ R GR
Sbjct: 69 EAQKAVERLDGRVVDGREITVQFAKYG--PNAERIHKGR 105
>gi|224073347|ref|XP_002304081.1| predicted protein [Populus trichocarpa]
gi|222841513|gb|EEE79060.1| predicted protein [Populus trichocarpa]
Length = 142
Score = 98.2 bits (243), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 52/99 (52%), Positives = 70/99 (70%), Gaps = 2/99 (2%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKR 66
PP I SL V N+T+RTT DDL +F++ G+V DI+IPRDR T ESRGFAFVR+
Sbjct: 9 PPDIADTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGESRGFAFVRYKYAD 68
Query: 67 DAEDALDAMDGRMLDGRELRVQMARYGRPPSSSRSRGGR 105
+A+ A++ +DGR++DGRE+ VQ A+YG P + R GR
Sbjct: 69 EAQKAVERLDGRVVDGREITVQFAKYG--PKAERIHKGR 105
>gi|449438193|ref|XP_004136874.1| PREDICTED: uncharacterized protein LOC101219227 [Cucumis sativus]
Length = 283
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/99 (50%), Positives = 69/99 (69%), Gaps = 2/99 (2%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKR 66
PP I SL V N+T+RTT DDL +F + G+V DI+IPRDR T +SRGFAFVR+
Sbjct: 9 PPDITDTYSLLVLNITFRTTADDLYPLFHKYGKVVDIFIPRDRRTGDSRGFAFVRYKYAD 68
Query: 67 DAEDALDAMDGRMLDGRELRVQMARYGRPPSSSRSRGGR 105
+A+ A++ +DG M+DGRE+ VQ A+YG P++ R G+
Sbjct: 69 EAQKAVERLDGTMVDGREITVQFAKYG--PNAERIHKGK 105
>gi|449478880|ref|XP_004155443.1| PREDICTED: uncharacterized protein LOC101223695 [Cucumis sativus]
Length = 283
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/99 (50%), Positives = 69/99 (69%), Gaps = 2/99 (2%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKR 66
PP I SL V N+T+RTT DDL +F + G+V DI+IPRDR T +SRGFAFVR+
Sbjct: 9 PPDITDTYSLLVLNITFRTTADDLYPLFHKYGKVVDIFIPRDRRTGDSRGFAFVRYKYAD 68
Query: 67 DAEDALDAMDGRMLDGRELRVQMARYGRPPSSSRSRGGR 105
+A+ A++ +DG M+DGRE+ VQ A+YG P++ R G+
Sbjct: 69 EAQKAVERLDGTMVDGREITVQFAKYG--PNAERIHKGK 105
>gi|168064593|ref|XP_001784245.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664211|gb|EDQ50939.1| predicted protein [Physcomitrella patens subsp. patens]
gi|448878415|gb|AGE46170.1| arginine/serine-rich splicing factor SC37 transcript I
[Physcomitrella patens subsp. patens]
gi|448878417|gb|AGE46171.1| arginine/serine-rich splicing factor SC37 transcript II
[Physcomitrella patens subsp. patens]
Length = 319
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/88 (54%), Positives = 64/88 (72%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKR 66
PP I SL V N+T+RT+ DDL +F+R G+V DI+IPRDR T ESRGFAFVR+
Sbjct: 9 PPDIRDTYSLLVLNITFRTSADDLYPLFDRYGKVVDIFIPRDRRTGESRGFAFVRYKYAD 68
Query: 67 DAEDALDAMDGRMLDGRELRVQMARYGR 94
+A+ A++ +DGR +DGR + VQ A+YGR
Sbjct: 69 EAQKAIERLDGREVDGRHIVVQFAKYGR 96
>gi|303275063|ref|XP_003056831.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461183|gb|EEH58476.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 96
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/83 (55%), Positives = 59/83 (71%)
Query: 8 PRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRD 67
P I GM SLKVDN+ YR +R +F GE+GD+Y+PRDR T SRGFAFVRF DK +
Sbjct: 5 PDISGMYSLKVDNIAYRVDVGRVREMFAAHGEIGDVYMPRDRTTGNSRGFAFVRFIDKNE 64
Query: 68 AEDALDAMDGRMLDGRELRVQMA 90
AEDA+ AM+ + ++GR +RV A
Sbjct: 65 AEDAIKAMNEKEIEGRAIRVAFA 87
>gi|224082127|ref|XP_002306575.1| predicted protein [Populus trichocarpa]
gi|222856024|gb|EEE93571.1| predicted protein [Populus trichocarpa]
Length = 101
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/94 (53%), Positives = 69/94 (73%), Gaps = 2/94 (2%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKR 66
PP I SL V N+T+RTT DDL +F++ G+V D++IPRDR T ESRGFAFVR+
Sbjct: 9 PPDIRDTFSLLVLNITFRTTADDLFPLFDKYGKVVDVFIPRDRRTGESRGFAFVRYKYAE 68
Query: 67 DAEDALDAMDGRMLDGRELRVQMARYGRPPSSSR 100
+A+ A+D +DGR++DGRE+ VQ A+YG P++ R
Sbjct: 69 EAQKAVDRLDGRVVDGREIMVQFAKYG--PNAER 100
>gi|448878409|gb|AGE46167.1| arginine/serine-rich splicing factor SC39 transcript I
[Physcomitrella patens subsp. patens]
Length = 340
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/88 (54%), Positives = 64/88 (72%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKR 66
PP I SL V N+T+RT+ DDL +F+R G+V DI+IPRDR T ESRGFAFVR+
Sbjct: 9 PPDIRDTYSLLVLNITFRTSADDLYPLFDRYGKVVDIFIPRDRRTGESRGFAFVRYKYSD 68
Query: 67 DAEDALDAMDGRMLDGRELRVQMARYGR 94
+A+ A++ +DGR +DGR + VQ A+YGR
Sbjct: 69 EAQKAIERLDGRAVDGRNIVVQSAKYGR 96
>gi|225459316|ref|XP_002285794.1| PREDICTED: uncharacterized protein LOC100243776 [Vitis vinifera]
gi|302141951|emb|CBI19154.3| unnamed protein product [Vitis vinifera]
Length = 257
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/99 (50%), Positives = 70/99 (70%), Gaps = 2/99 (2%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKR 66
PP I SL V N+T+RTT DDL +F++ G+V D++IPRDR T +SRGFAFVR+
Sbjct: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFDKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
Query: 67 DAEDALDAMDGRMLDGRELRVQMARYGRPPSSSRSRGGR 105
+A+ A++ +DGR +DGRE+ VQ A+YG P++ R GR
Sbjct: 69 EAQKAVEKLDGRNVDGREIMVQFAKYG--PNAERIHKGR 105
>gi|448878320|gb|AGE46123.1| arginine/serine-rich splicing factor SC31 transcript I [Sorghum
bicolor]
Length = 268
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/87 (54%), Positives = 63/87 (72%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKR 66
PP I SL V N+++RTT DDL +FER G+V D++IPRDR T +SRGFAFVR+
Sbjct: 9 PPDIRDTFSLLVLNISFRTTADDLYPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
Query: 67 DAEDALDAMDGRMLDGRELRVQMARYG 93
+A+ A+D +DGR +DGR + VQ A+YG
Sbjct: 69 EAQKAIDRLDGRNVDGRNIMVQFAKYG 95
>gi|448878326|gb|AGE46126.1| arginine/serine-rich splicing factor SC31 transcript IV [Sorghum
bicolor]
Length = 273
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/87 (54%), Positives = 63/87 (72%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKR 66
PP I SL V N+++RTT DDL +FER G+V D++IPRDR T +SRGFAFVR+
Sbjct: 9 PPDIRDTFSLLVLNISFRTTADDLYPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
Query: 67 DAEDALDAMDGRMLDGRELRVQMARYG 93
+A+ A+D +DGR +DGR + VQ A+YG
Sbjct: 69 EAQKAIDRLDGRNVDGRNIMVQFAKYG 95
>gi|452822795|gb|EME29811.1| splicing factor, arginine/serine-rich 2 [Galdieria sulphuraria]
Length = 211
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/86 (54%), Positives = 61/86 (70%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKR 66
PP I G SL V N+++RTTP+DL +F++ GEV D YIPR+R SRGFAFVRF +
Sbjct: 20 PPDISGTYSLLVLNISFRTTPNDLTPLFDKYGEVVDCYIPRNRRNGHSRGFAFVRFRKEE 79
Query: 67 DAEDALDAMDGRMLDGRELRVQMARY 92
DA A++ MDGR +DGR + VQ A+Y
Sbjct: 80 DARKAMEEMDGREVDGRSITVQFAKY 105
>gi|224099521|ref|XP_002334472.1| predicted protein [Populus trichocarpa]
gi|222872360|gb|EEF09491.1| predicted protein [Populus trichocarpa]
Length = 101
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 48/87 (55%), Positives = 65/87 (74%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKR 66
PP I SL V N+T+RTT DDL +F++ G+V DI+IPRDR T ESRGFAFVR+
Sbjct: 9 PPDIADTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGESRGFAFVRYKYAD 68
Query: 67 DAEDALDAMDGRMLDGRELRVQMARYG 93
+A+ A++ +DGR++DGRE+ VQ A+YG
Sbjct: 69 EAQKAVERLDGRVVDGREITVQFAKYG 95
>gi|78191396|gb|ABB29919.1| unknown [Solanum tuberosum]
Length = 258
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 49/99 (49%), Positives = 73/99 (73%), Gaps = 2/99 (2%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKR 66
PP I+ SL V N+T+RTT DDL +F++ G+V D++IPRDR T +SRGFAFVR+ +
Sbjct: 9 PPDIKDTYSLLVLNVTFRTTADDLFPLFDKYGKVVDVFIPRDRRTGDSRGFAFVRYKYQD 68
Query: 67 DAEDALDAMDGRMLDGRELRVQMARYGRPPSSSRSRGGR 105
+A+ A++ +DGR++DGRE+ V+ A+YG P++ R GR
Sbjct: 69 EAQKAVEKLDGRVVDGREIMVRFAKYG--PNAERIDKGR 105
>gi|448878419|gb|AGE46172.1| arginine/serine-rich splicing factor SC37 transcript III
[Physcomitrella patens subsp. patens]
Length = 257
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 48/88 (54%), Positives = 64/88 (72%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKR 66
PP I SL V N+T+RT+ DDL +F+R G+V DI+IPRDR T ESRGFAFVR+
Sbjct: 9 PPDIRDTYSLLVLNITFRTSADDLYPLFDRYGKVVDIFIPRDRRTGESRGFAFVRYKYAD 68
Query: 67 DAEDALDAMDGRMLDGRELRVQMARYGR 94
+A+ A++ +DGR +DGR + VQ A+YGR
Sbjct: 69 EAQKAIERLDGREVDGRHIVVQFAKYGR 96
>gi|448878206|gb|AGE46066.1| arginine/serine-rich splicing factor SC30 transcript V [Zea mays]
Length = 262
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 51/102 (50%), Positives = 71/102 (69%), Gaps = 2/102 (1%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKR 66
PP I SL V N+++RTT DDL +FER G+V D++IPRDR T +SRGFAFVR+
Sbjct: 9 PPDIRDTFSLLVLNISFRTTADDLFPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
Query: 67 DAEDALDAMDGRMLDGRELRVQMARYGRPPSSSRSRGGRDRD 108
+A+ A+D +DGR +DGR + VQ A+YG P++ R GR ++
Sbjct: 69 EAQKAIDRLDGRDVDGRNIMVQFAKYG--PNAEPIRKGRVKE 108
>gi|413925182|gb|AFW65114.1| hypothetical protein ZEAMMB73_855473 [Zea mays]
Length = 268
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 51/99 (51%), Positives = 69/99 (69%), Gaps = 2/99 (2%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKR 66
PP I SL V N+++RTT DDL +FER G+V D++IPRDR T +SRGFAFVR+
Sbjct: 9 PPDIRDTFSLLVLNISFRTTADDLFPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
Query: 67 DAEDALDAMDGRMLDGRELRVQMARYGRPPSSSRSRGGR 105
+A+ A+D +DGR +DGR + VQ A+YG P++ R GR
Sbjct: 69 EAQKAIDRLDGRDVDGRNIMVQFAKYG--PNAEPIRKGR 105
>gi|238006960|gb|ACR34515.1| unknown [Zea mays]
gi|413925185|gb|AFW65117.1| hypothetical protein ZEAMMB73_855473 [Zea mays]
gi|413925186|gb|AFW65118.1| hypothetical protein ZEAMMB73_855473 [Zea mays]
gi|448878198|gb|AGE46062.1| arginine/serine-rich splicing factor SC30 transcript I [Zea mays]
gi|448878204|gb|AGE46065.1| arginine/serine-rich splicing factor SC30 transcript IV [Zea mays]
Length = 264
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 51/102 (50%), Positives = 71/102 (69%), Gaps = 2/102 (1%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKR 66
PP I SL V N+++RTT DDL +FER G+V D++IPRDR T +SRGFAFVR+
Sbjct: 9 PPDIRDTFSLLVLNISFRTTADDLFPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
Query: 67 DAEDALDAMDGRMLDGRELRVQMARYGRPPSSSRSRGGRDRD 108
+A+ A+D +DGR +DGR + VQ A+YG P++ R GR ++
Sbjct: 69 EAQKAIDRLDGRDVDGRNIMVQFAKYG--PNAEPIRKGRVKE 108
>gi|302820371|ref|XP_002991853.1| hypothetical protein SELMODRAFT_134332 [Selaginella
moellendorffii]
gi|302822709|ref|XP_002993011.1| hypothetical protein SELMODRAFT_136271 [Selaginella
moellendorffii]
gi|300139211|gb|EFJ05957.1| hypothetical protein SELMODRAFT_136271 [Selaginella
moellendorffii]
gi|300140391|gb|EFJ07115.1| hypothetical protein SELMODRAFT_134332 [Selaginella
moellendorffii]
Length = 101
Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 50/93 (53%), Positives = 67/93 (72%), Gaps = 1/93 (1%)
Query: 3 YGRP-PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
+GR PP I SL V N+T+RTT DDL +F+R G+V DI+IPRDR + ESRGFAFVR
Sbjct: 4 FGRAGPPDIRDTYSLLVLNITFRTTADDLYPLFDRYGKVVDIFIPRDRRSGESRGFAFVR 63
Query: 62 FFDKRDAEDALDAMDGRMLDGRELRVQMARYGR 94
+ +A+ A+D +DG +DGR++ VQ A+YGR
Sbjct: 64 YKHVDEAQKAIDRLDGMTIDGRQIAVQFAKYGR 96
>gi|448878200|gb|AGE46063.1| arginine/serine-rich splicing factor SC30 transcript II [Zea mays]
Length = 254
Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 51/102 (50%), Positives = 71/102 (69%), Gaps = 2/102 (1%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKR 66
PP I SL V N+++RTT DDL +FER G+V D++IPRDR T +SRGFAFVR+
Sbjct: 9 PPDIRDTFSLLVLNISFRTTADDLFPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
Query: 67 DAEDALDAMDGRMLDGRELRVQMARYGRPPSSSRSRGGRDRD 108
+A+ A+D +DGR +DGR + VQ A+YG P++ R GR ++
Sbjct: 69 EAQKAIDRLDGRDVDGRNIMVQFAKYG--PNAEPIRKGRVKE 108
>gi|357148211|ref|XP_003574673.1| PREDICTED: uncharacterized protein LOC100824108 [Brachypodium
distachyon]
Length = 283
Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 50/99 (50%), Positives = 69/99 (69%), Gaps = 2/99 (2%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKR 66
PP I SL V N+++RTT DDL +F+R G+V D++IPRDR T +SRGFAFVR+
Sbjct: 9 PPDIRDTFSLLVLNISFRTTADDLYPLFDRYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
Query: 67 DAEDALDAMDGRMLDGRELRVQMARYGRPPSSSRSRGGR 105
+A+ A+D +DGR +DGR + VQ A+YG P++ R GR
Sbjct: 69 EAQKAVDRLDGRNVDGRNIMVQFAKYG--PNAEPIRKGR 105
>gi|448878212|gb|AGE46069.1| arginine/serine-rich splicing factor SC30 transcript VIII [Zea
mays]
Length = 261
Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 51/99 (51%), Positives = 69/99 (69%), Gaps = 2/99 (2%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKR 66
PP I SL V N+++RTT DDL +FER G+V D++IPRDR T +SRGFAFVR+
Sbjct: 9 PPDIRDTFSLLVLNISFRTTADDLFPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
Query: 67 DAEDALDAMDGRMLDGRELRVQMARYGRPPSSSRSRGGR 105
+A+ A+D +DGR +DGR + VQ A+YG P++ R GR
Sbjct: 69 EAQKAIDRLDGRDVDGRNIMVQFAKYG--PNAEPIRKGR 105
>gi|448878208|gb|AGE46067.1| arginine/serine-rich splicing factor SC30 transcript VI [Zea mays]
Length = 270
Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 51/99 (51%), Positives = 69/99 (69%), Gaps = 2/99 (2%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKR 66
PP I SL V N+++RTT DDL +FER G+V D++IPRDR T +SRGFAFVR+
Sbjct: 9 PPDIRDTFSLLVLNISFRTTADDLFPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
Query: 67 DAEDALDAMDGRMLDGRELRVQMARYGRPPSSSRSRGGR 105
+A+ A+D +DGR +DGR + VQ A+YG P++ R GR
Sbjct: 69 EAQKAIDRLDGRDVDGRNIMVQFAKYG--PNAEPIRKGR 105
>gi|224032171|gb|ACN35161.1| unknown [Zea mays]
gi|413925183|gb|AFW65115.1| splicing factor, arginine/serine-rich 2 isoform 1 [Zea mays]
gi|413925184|gb|AFW65116.1| splicing factor, arginine/serine-rich 2 isoform 2 [Zea mays]
gi|448878210|gb|AGE46068.1| arginine/serine-rich splicing factor SC30 transcript VII [Zea mays]
Length = 256
Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 51/99 (51%), Positives = 69/99 (69%), Gaps = 2/99 (2%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKR 66
PP I SL V N+++RTT DDL +FER G+V D++IPRDR T +SRGFAFVR+
Sbjct: 9 PPDIRDTFSLLVLNISFRTTADDLFPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
Query: 67 DAEDALDAMDGRMLDGRELRVQMARYGRPPSSSRSRGGR 105
+A+ A+D +DGR +DGR + VQ A+YG P++ R GR
Sbjct: 69 EAQKAIDRLDGRDVDGRNIMVQFAKYG--PNAEPIRKGR 105
>gi|195612902|gb|ACG28281.1| splicing factor, arginine/serine-rich 2 [Zea mays]
gi|414869216|tpg|DAA47773.1| TPA: splicing factor, arginine/serine-rich 2 [Zea mays]
gi|448878194|gb|AGE46060.1| arginine/serine-rich splicing factor SC32 transcript II [Zea
mays]
Length = 248
Score = 95.1 bits (235), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 46/86 (53%), Positives = 62/86 (72%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKR 66
PP I SL V N+++RTT DDL +FERCG+V D++IPRDR T +SRGFAFVR+
Sbjct: 9 PPDIRDTFSLLVLNISFRTTADDLFPLFERCGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
Query: 67 DAEDALDAMDGRMLDGRELRVQMARY 92
+A+ A+D +DGR +DGR + VQ A +
Sbjct: 69 EAQKAIDRLDGRNVDGRNIMVQFANH 94
>gi|116790938|gb|ABK25797.1| unknown [Picea sitchensis]
Length = 300
Score = 95.1 bits (235), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 49/97 (50%), Positives = 68/97 (70%), Gaps = 1/97 (1%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKR 66
PP I SL V N+T+RT+ DDL +F+R G+V DI+IPRD+ T +SRGFAFVR+
Sbjct: 9 PPDIRDTYSLLVLNITFRTSADDLFPLFDRYGKVVDIFIPRDKRTGDSRGFAFVRYKYAD 68
Query: 67 DAEDALDAMDGRMLDGRELRVQMARYGRPPSSSRSRG 103
+A+ A+D +DGR +DGR + VQ A+YG P + + RG
Sbjct: 69 EAQKAIDRLDGRNVDGRNIMVQFAKYG-PNAEATQRG 104
>gi|226510383|ref|NP_001140384.1| hypothetical protein [Zea mays]
gi|194699256|gb|ACF83712.1| unknown [Zea mays]
gi|413925181|gb|AFW65113.1| hypothetical protein ZEAMMB73_855473 [Zea mays]
gi|448878214|gb|AGE46070.1| arginine/serine-rich splicing factor SC30 transcript IX [Zea mays]
Length = 274
Score = 95.1 bits (235), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 51/102 (50%), Positives = 71/102 (69%), Gaps = 2/102 (1%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKR 66
PP I SL V N+++RTT DDL +FER G+V D++IPRDR T +SRGFAFVR+
Sbjct: 9 PPDIRDTFSLLVLNISFRTTADDLFPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
Query: 67 DAEDALDAMDGRMLDGRELRVQMARYGRPPSSSRSRGGRDRD 108
+A+ A+D +DGR +DGR + VQ A+YG P++ R GR ++
Sbjct: 69 EAQKAIDRLDGRDVDGRNIMVQFAKYG--PNAEPIRKGRVKE 108
>gi|168015818|ref|XP_001760447.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688461|gb|EDQ74838.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 259
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/88 (54%), Positives = 64/88 (72%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKR 66
PP I SL V N+T+RT+ DDL +F+R G+V DI+IPRDR T ESRGFAFVR+
Sbjct: 9 PPDIRDTYSLLVLNITFRTSADDLYPLFDRYGKVVDIFIPRDRRTGESRGFAFVRYKYAD 68
Query: 67 DAEDALDAMDGRMLDGRELRVQMARYGR 94
+A+ A++ +DGR +DGR + VQ A+YGR
Sbjct: 69 EAQKAIERLDGRTVDGRNIVVQSAKYGR 96
>gi|326437616|gb|EGD83186.1| hypothetical protein PTSG_03817 [Salpingoeca sp. ATCC 50818]
Length = 204
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/85 (50%), Positives = 62/85 (72%)
Query: 8 PRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRD 67
P + + S+KVDN+ T +DLR F+ GE+GDIY+PR R T + RG+AFVRF ++RD
Sbjct: 7 PDVSNLFSVKVDNIDRSTREEDLREAFKEFGEIGDIYMPRYRDTMDPRGYAFVRFINERD 66
Query: 68 AEDALDAMDGRMLDGRELRVQMARY 92
AEDA+ MDG+ L+G+E+ Q+A+Y
Sbjct: 67 AEDAIKHMDGQQLNGKEVYCQLAKY 91
>gi|448878328|gb|AGE46127.1| arginine/serine-rich splicing factor SC31 transcript V [Sorghum
bicolor]
Length = 185
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/97 (50%), Positives = 67/97 (69%), Gaps = 1/97 (1%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKR 66
PP I SL V N+++RTT DDL +FER G+V D++IPRDR T +SRGFAFVR+
Sbjct: 9 PPDIRDTFSLLVLNISFRTTADDLYPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
Query: 67 DAEDALDAMDGRMLDGRELRVQMARYGRPPSSSRSRG 103
+A+ A+D +DGR +DGR + VQ A+YG P + +G
Sbjct: 69 EAQKAIDRLDGRNVDGRNIMVQFAKYG-PNAEPIQKG 104
>gi|448878322|gb|AGE46124.1| arginine/serine-rich splicing factor SC31 transcript II [Sorghum
bicolor]
Length = 180
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/97 (50%), Positives = 67/97 (69%), Gaps = 1/97 (1%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKR 66
PP I SL V N+++RTT DDL +FER G+V D++IPRDR T +SRGFAFVR+
Sbjct: 9 PPDIRDTFSLLVLNISFRTTADDLYPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
Query: 67 DAEDALDAMDGRMLDGRELRVQMARYGRPPSSSRSRG 103
+A+ A+D +DGR +DGR + VQ A+YG P + +G
Sbjct: 69 EAQKAIDRLDGRNVDGRNIMVQFAKYG-PNAEPIQKG 104
>gi|255084425|ref|XP_002508787.1| predicted protein [Micromonas sp. RCC299]
gi|226524064|gb|ACO70045.1| predicted protein [Micromonas sp. RCC299]
Length = 248
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 61/89 (68%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKR 66
PP I G+ SLK+DNL Y T + L+ +F + GE+GD+Y+PRD +T+ SRGFAFVRF D+
Sbjct: 24 PPDISGLYSLKLDNLDYSVTLEQLKELFGKHGEIGDVYMPRDYYTKRSRGFAFVRFKDRT 83
Query: 67 DAEDALDAMDGRMLDGRELRVQMARYGRP 95
AEDA+ D + L+GR + + A RP
Sbjct: 84 AAEDAIKEFDQKELNGRPIACRFAEKPRP 112
>gi|195657783|gb|ACG48359.1| splicing factor, arginine/serine-rich 2 [Zea mays]
Length = 254
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/87 (54%), Positives = 63/87 (72%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKR 66
PP I SL V N+++RTT DDL +FER G+V D++IPRDR T +SRGFAFVR+
Sbjct: 9 PPDIRDTFSLLVLNISFRTTADDLFPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
Query: 67 DAEDALDAMDGRMLDGRELRVQMARYG 93
+A+ A+D +DGR +DGR + VQ A+YG
Sbjct: 69 EAQKAIDRLDGRDVDGRNIMVQFAKYG 95
>gi|148697220|gb|EDL29167.1| RIKEN cDNA 4930595M18 [Mus musculus]
Length = 794
Score = 93.2 bits (230), Expect = 3e-17, Method: Composition-based stats.
Identities = 55/153 (35%), Positives = 86/153 (56%), Gaps = 5/153 (3%)
Query: 10 IEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAE 69
++GM LKV+NL + T+ L+ VFE G +GD+YIPR+ T E GFAF+ F++K DA
Sbjct: 10 VDGMTCLKVENLAHHTSSYTLKHVFEDYGPLGDVYIPRNHLTEEHYGFAFIHFYNKCDAN 69
Query: 70 DALDAMDGRMLDGRELRVQMARYGRP----PSSSRSRGGRDRDRRRDRSRSRDRRYTRSR 125
DAL +++G +LDG +L+VQM P P S R + ++ D +R++ +
Sbjct: 70 DALHSLNGFLLDGCKLKVQMVYNDDPHYAQPDCSSGRQYQYKEENHDLQSECERQHFSNT 129
Query: 126 SFSSRSRSGSKSPRKARSKSIDRDNKHERNGRS 158
+RS S S S + KS ++ H R+ +
Sbjct: 130 RIQTRSHSRS-SGDDSEFKSQSSNHLHRRSSST 161
>gi|26325758|dbj|BAC26633.1| unnamed protein product [Mus musculus]
Length = 829
Score = 92.8 bits (229), Expect = 4e-17, Method: Composition-based stats.
Identities = 55/153 (35%), Positives = 86/153 (56%), Gaps = 5/153 (3%)
Query: 10 IEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAE 69
++GM LKV+NL + T+ L+ VFE G +GD+YIPR+ T E GFAF+ F++K DA
Sbjct: 10 VDGMTCLKVENLAHHTSSYTLKHVFEDYGPLGDVYIPRNHLTEEHYGFAFIHFYNKCDAN 69
Query: 70 DALDAMDGRMLDGRELRVQMARYGRP----PSSSRSRGGRDRDRRRDRSRSRDRRYTRSR 125
DAL +++G +LDG +L+VQM P P S R + ++ D +R++ +
Sbjct: 70 DALHSLNGFLLDGCKLKVQMVYNDDPHYAQPDCSSGRQYQYKEENHDLQSEWERQHFSNT 129
Query: 126 SFSSRSRSGSKSPRKARSKSIDRDNKHERNGRS 158
+RS S S S + KS ++ H R+ +
Sbjct: 130 RIQTRSHSRS-SGDDSEFKSQSSNHLHRRSSST 161
>gi|448878330|gb|AGE46128.1| arginine/serine-rich splicing factor SC31 transcript VI [Sorghum
bicolor]
Length = 107
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/87 (54%), Positives = 63/87 (72%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKR 66
PP I SL V N+++RTT DDL +FER G+V D++IPRDR T +SRGFAFVR+
Sbjct: 9 PPDIRDTFSLLVLNISFRTTADDLYPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
Query: 67 DAEDALDAMDGRMLDGRELRVQMARYG 93
+A+ A+D +DGR +DGR + VQ A+YG
Sbjct: 69 EAQKAIDRLDGRNVDGRNIMVQFAKYG 95
>gi|262118195|ref|NP_775611.2| uncharacterized protein LOC245492 [Mus musculus]
gi|124297553|gb|AAI31911.1| RIKEN cDNA 4930595M18 gene [Mus musculus]
gi|124376274|gb|AAI32592.1| RIKEN cDNA 4930595M18 gene [Mus musculus]
Length = 829
Score = 92.8 bits (229), Expect = 5e-17, Method: Composition-based stats.
Identities = 55/153 (35%), Positives = 86/153 (56%), Gaps = 5/153 (3%)
Query: 10 IEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAE 69
++GM LKV+NL + T+ L+ VFE G +GD+YIPR+ T E GFAF+ F++K DA
Sbjct: 10 VDGMTCLKVENLAHHTSSYTLKHVFEDYGPLGDVYIPRNHLTEEHYGFAFIHFYNKCDAN 69
Query: 70 DALDAMDGRMLDGRELRVQMARYGRP----PSSSRSRGGRDRDRRRDRSRSRDRRYTRSR 125
DAL +++G +LDG +L+VQM P P S R + ++ D +R++ +
Sbjct: 70 DALHSLNGFLLDGCKLKVQMVYNDDPHYAQPDCSSGRQYQYKEENHDLQSECERQHFSNT 129
Query: 126 SFSSRSRSGSKSPRKARSKSIDRDNKHERNGRS 158
+RS S S S + KS ++ H R+ +
Sbjct: 130 RIQTRSHSRS-SGDDSEFKSQSSNHLHRRSSST 161
>gi|218201347|gb|EEC83774.1| hypothetical protein OsI_29668 [Oryza sativa Indica Group]
gi|222640763|gb|EEE68895.1| hypothetical protein OsJ_27729 [Oryza sativa Japonica Group]
Length = 298
Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 48/97 (49%), Positives = 67/97 (69%), Gaps = 1/97 (1%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKR 66
PP I SL V N+++RTT DDL +F+R G+V D++IPRDR T +SRGFAFVR+
Sbjct: 9 PPDIRDTFSLLVLNISFRTTADDLFPLFDRYGKVVDVFIPRDRRTGDSRGFAFVRYKYAE 68
Query: 67 DAEDALDAMDGRMLDGRELRVQMARYGRPPSSSRSRG 103
+A+ A+D +DGR +DGR + VQ A+YG P + +G
Sbjct: 69 EAQKAIDRLDGRNVDGRNIMVQFAKYG-PNAEPIRKG 104
>gi|115476996|ref|NP_001062094.1| Os08g0486200 [Oryza sativa Japonica Group]
gi|42408182|dbj|BAD09319.1| putative splicing factor, arginine/serine-rich [Oryza sativa
Japonica Group]
gi|113624063|dbj|BAF24008.1| Os08g0486200 [Oryza sativa Japonica Group]
gi|215693774|dbj|BAG88973.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737273|dbj|BAG96202.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 289
Score = 92.0 bits (227), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 48/97 (49%), Positives = 67/97 (69%), Gaps = 1/97 (1%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKR 66
PP I SL V N+++RTT DDL +F+R G+V D++IPRDR T +SRGFAFVR+
Sbjct: 9 PPDIRDTFSLLVLNISFRTTADDLFPLFDRYGKVVDVFIPRDRRTGDSRGFAFVRYKYAE 68
Query: 67 DAEDALDAMDGRMLDGRELRVQMARYGRPPSSSRSRG 103
+A+ A+D +DGR +DGR + VQ A+YG P + +G
Sbjct: 69 EAQKAIDRLDGRNVDGRNIMVQFAKYG-PNAEPIRKG 104
>gi|242035597|ref|XP_002465193.1| hypothetical protein SORBIDRAFT_01g033710 [Sorghum bicolor]
gi|241919047|gb|EER92191.1| hypothetical protein SORBIDRAFT_01g033710 [Sorghum bicolor]
Length = 216
Score = 91.7 bits (226), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 65/92 (70%), Gaps = 2/92 (2%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
SL V N+++RTT DDL +F+R GEV DI+IPRDR T ESRGFAFVR+ + +A+DA+D
Sbjct: 16 FSLLVLNVSFRTTADDLFPLFDRYGEVVDIHIPRDRRTGESRGFAFVRYNYEDEAQDAID 75
Query: 74 AMDGRMLDGRELRVQMARYGRPPSSSRSRGGR 105
+DG GR L VQ A+YG P++ + GR
Sbjct: 76 GLDGMRFGGRALMVQFAKYG--PNAEKIHRGR 105
>gi|448878216|gb|AGE46071.1| arginine/serine-rich splicing factor SC30 transcript X [Zea mays]
Length = 136
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 70/102 (68%), Gaps = 2/102 (1%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKR 66
PP I SL V N+++RTT DDL +FER G+V D++ PRDR T +SRGFAFVR+
Sbjct: 9 PPDIRDTFSLLVLNISFRTTADDLFPLFERYGKVVDVFTPRDRRTGDSRGFAFVRYKYAD 68
Query: 67 DAEDALDAMDGRMLDGRELRVQMARYGRPPSSSRSRGGRDRD 108
+A+ A+D +DGR +DGR + VQ A+YG P++ R GR ++
Sbjct: 69 EAQKAIDRLDGRDVDGRNIMVQFAKYG--PNAEPIRKGRVKE 108
>gi|302765723|ref|XP_002966282.1| hypothetical protein SELMODRAFT_7952 [Selaginella moellendorffii]
gi|302793049|ref|XP_002978290.1| hypothetical protein SELMODRAFT_7949 [Selaginella moellendorffii]
gi|300154311|gb|EFJ20947.1| hypothetical protein SELMODRAFT_7949 [Selaginella moellendorffii]
gi|300165702|gb|EFJ32309.1| hypothetical protein SELMODRAFT_7952 [Selaginella moellendorffii]
Length = 92
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 64/88 (72%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKR 66
PP I SL V N+T+RT+ DDL +F+R G+V DI+IPRDR T +SRGFAFVR+
Sbjct: 1 PPDIRDTYSLLVLNITFRTSADDLFPLFDRYGKVVDIFIPRDRRTGDSRGFAFVRYKHAD 60
Query: 67 DAEDALDAMDGRMLDGRELRVQMARYGR 94
+A+ A++ +DG+ +DGR + VQ A+YGR
Sbjct: 61 EAQKAIERLDGKNVDGRNIVVQFAKYGR 88
>gi|148909922|gb|ABR18047.1| unknown [Picea sitchensis]
Length = 267
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/99 (48%), Positives = 69/99 (69%), Gaps = 2/99 (2%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKR 66
PP I SL V N+T+RT+ DDL +F+R G+V DI+IPRDR T +SRGFAF R+
Sbjct: 9 PPDIRDTYSLLVLNITFRTSADDLFPLFDRYGKVVDIFIPRDRRTGDSRGFAFFRYKYAD 68
Query: 67 DAEDALDAMDGRMLDGRELRVQMARYGRPPSSSRSRGGR 105
+A+ A++ +DG+ +DGR + VQ A+YG P++ R + GR
Sbjct: 69 EAQKAVERLDGKNVDGRYIMVQFAKYG--PNAERIQRGR 105
>gi|414867082|tpg|DAA45639.1| TPA: splicing factor, arginine/serine-rich 2 [Zea mays]
Length = 216
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/113 (48%), Positives = 74/113 (65%), Gaps = 7/113 (6%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
SL V N+++RTT DDL +F+R G+V DIYIPRD T + RGFAFVR+ + +A+DA+D
Sbjct: 16 FSLLVLNVSFRTTADDLFPLFDRYGKVLDIYIPRDHRTGDPRGFAFVRYNYEDEAQDAID 75
Query: 74 AMDGRMLDGRELRVQMARYGRPPSSSRSRGGR-----DRDRRRDRSRSRDRRY 121
+DG DGR L VQ A+YG P++ + GR + R R RSRS +RY
Sbjct: 76 GLDGMRFDGRALMVQFAKYG--PNAEKIHRGRITEENPKPRGRCRSRSPRQRY 126
>gi|145346679|ref|XP_001417812.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578040|gb|ABO96105.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 98
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 62/98 (63%)
Query: 8 PRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRD 67
P I +VS+K+DN++Y +DLR FE+ G+VGD+YIP++R + +RGFAFVR+ +
Sbjct: 1 PDISNLVSVKIDNVSYELREEDLREAFEKFGDVGDVYIPKERGSYRARGFAFVRYHSREH 60
Query: 68 AEDALDAMDGRMLDGRELRVQMARYGRPPSSSRSRGGR 105
AE A+ AM L GR +R +A GRP ++ R
Sbjct: 61 AEAAVSAMHETELGGRHIRAAIAERGRPEGGYQANNNR 98
>gi|414867083|tpg|DAA45640.1| TPA: hypothetical protein ZEAMMB73_077445 [Zea mays]
gi|448878222|gb|AGE46074.1| arginine/serine-rich splicing factor SC26 transcript III [Zea mays]
Length = 198
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/113 (48%), Positives = 74/113 (65%), Gaps = 7/113 (6%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
SL V N+++RTT DDL +F+R G+V DIYIPRD T + RGFAFVR+ + +A+DA+D
Sbjct: 16 FSLLVLNVSFRTTADDLFPLFDRYGKVLDIYIPRDHRTGDPRGFAFVRYNYEDEAQDAID 75
Query: 74 AMDGRMLDGRELRVQMARYGRPPSSSRSRGGR-----DRDRRRDRSRSRDRRY 121
+DG DGR L VQ A+YG P++ + GR + R R RSRS +RY
Sbjct: 76 GLDGMRFDGRALMVQFAKYG--PNAEKIHRGRITEENPKPRGRCRSRSPRQRY 126
>gi|448878220|gb|AGE46073.1| arginine/serine-rich splicing factor SC26 transcript II [Zea mays]
Length = 129
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/106 (48%), Positives = 68/106 (64%), Gaps = 1/106 (0%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
SL V N+++RTT DDL +F+R G+V DIYIPRD T + RGFAFVR+ + +A+DA+D
Sbjct: 18 FSLLVLNVSFRTTADDLFPLFDRYGKVLDIYIPRDHRTGDPRGFAFVRYNYEDEAQDAID 77
Query: 74 AMDGRMLDGRELRVQMARYGRPPSSSRSRGGRDRDRRRDRSRSRDR 119
+DG DGR L VQ A+YG P + RG + + R R R R
Sbjct: 78 GLDGMRFDGRALMVQFAKYG-PNAEKIHRGRITEENPKPRGRCRSR 122
>gi|326532152|dbj|BAK01452.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 208
Score = 89.0 bits (219), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/133 (44%), Positives = 77/133 (57%), Gaps = 10/133 (7%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
SL V NL PDDLRR F + G + D+YIPRD +T+E RGF FV++FD DA DA
Sbjct: 38 TSLLVRNLRRDCRPDDLRRPFAQFGRLKDVYIPRDYYTQEPRGFGFVQYFDPDDAADAKY 97
Query: 74 AMDGRMLDGRELRVQMARYGRPPSSSRSRGGRDRDRRRDRSRSRDRRYTRS----RSFSS 129
MDG+++ GRE+ V A+ +R + R R R RS D+R++ S S+
Sbjct: 98 YMDGQVILGREVAVVFAQ------ENRKKPAEMRTRESSRGRSYDQRHSPSPRGRPSYRG 151
Query: 130 RSRSGSKSPRKAR 142
RS S S SPR AR
Sbjct: 152 RSYSRSPSPRPAR 164
>gi|226496531|ref|NP_001152123.1| splicing factor, arginine/serine-rich 2 [Zea mays]
gi|195652939|gb|ACG45937.1| splicing factor, arginine/serine-rich 2 [Zea mays]
Length = 161
Score = 88.6 bits (218), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 64/91 (70%), Gaps = 2/91 (2%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
SL V N+++RTT DDL +F+R G+V DIYIPRD T + RGFAFVR+ + +A+DA+D
Sbjct: 17 SLLVLNVSFRTTADDLFPLFDRYGKVLDIYIPRDHRTGDPRGFAFVRYNYEDEAQDAIDG 76
Query: 75 MDGRMLDGRELRVQMARYGRPPSSSRSRGGR 105
+DG DGR L VQ A+YG P++ + GR
Sbjct: 77 LDGMRFDGRALMVQFAKYG--PNAEKIHRGR 105
>gi|392343172|ref|XP_003754816.1| PREDICTED: uncharacterized protein LOC317533 [Rattus norvegicus]
gi|392355651|ref|XP_003752096.1| PREDICTED: uncharacterized protein LOC317533 [Rattus norvegicus]
Length = 829
Score = 88.6 bits (218), Expect = 8e-16, Method: Composition-based stats.
Identities = 49/153 (32%), Positives = 84/153 (54%), Gaps = 5/153 (3%)
Query: 10 IEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAE 69
++GM LKV+NL Y T+ L+ +FE G VGD+++PR+ T E+ GFAF+ F++ DA+
Sbjct: 10 VDGMTCLKVENLAYHTSSYTLKLIFEDYGAVGDVFVPRNHLTEENYGFAFIHFYNNCDAK 69
Query: 70 DALDAMDGRMLDGRELRVQMAR----YGRPPSSSRSRGGRDRDRRRDRSRSRDRRYTRSR 125
DA+ + G +LDG +L+VQM + P R + + + R++ +
Sbjct: 70 DAMHGLHGILLDGNKLKVQMVHNDDLHYAQPDCGHGRQYHYEEENHELQKQYKRQHCSNT 129
Query: 126 SFSSRSRSGSKSPRKARSKSIDRDNKHERNGRS 158
+RS+S SP + SKS ++ H ++ +
Sbjct: 130 RIQTRSQS-RLSPDNSESKSQSCNHSHRKSAST 161
>gi|449528821|ref|XP_004171401.1| PREDICTED: uncharacterized LOC101216322 [Cucumis sativus]
Length = 251
Score = 88.6 bits (218), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 61/147 (41%), Positives = 85/147 (57%), Gaps = 3/147 (2%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKR 66
PP I SL V N+T+RTT DDL +F++ G+V D++IPRDR T +SRGFAFVR+
Sbjct: 9 PPDIRDTYSLLVLNITFRTTADDLYPLFDKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
Query: 67 DAEDALDAMDGRMLDGRELRVQMARYGRPPSSSRSRGGRDRDRRRDRSRSRDRRYTRSRS 126
+A+ A+D +DGRMLDGRE+ VQ A+YG P++ + R GR + R RSR
Sbjct: 69 EAQKAIDKLDGRMLDGREIMVQFAKYG--PNAEKIRKGRVMESSSKTRGRSRSRSPRSRH 126
Query: 127 FSSRSRSGSKSPRKARSKSIDR-DNKH 152
+ ++RS+ D H
Sbjct: 127 RDDHRDRDYRRRSRSRSRERYDRDRPH 153
>gi|70942643|ref|XP_741463.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56519859|emb|CAH77253.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
Length = 254
Score = 88.6 bits (218), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 59/82 (71%)
Query: 10 IEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAE 69
+E SL + NL++ T+PD +R++FE G++ D+Y+P D +TR RGF FV ++D + A+
Sbjct: 2 VENGCSLLIRNLSFETSPDKVRKIFEHFGKIRDVYLPLDHYTRRPRGFGFVEYYDPKHAK 61
Query: 70 DALDAMDGRMLDGRELRVQMAR 91
+AL+ ++ +DG+E+R+ +A+
Sbjct: 62 EALNILNNSKIDGKEIRIIVAQ 83
>gi|242035637|ref|XP_002465213.1| hypothetical protein SORBIDRAFT_01g034200 [Sorghum bicolor]
gi|241919067|gb|EER92211.1| hypothetical protein SORBIDRAFT_01g034200 [Sorghum bicolor]
gi|448878340|gb|AGE46133.1| arginine/serine-rich splicing factor SCL25A transcript I [Sorghum
bicolor]
gi|448878342|gb|AGE46134.1| arginine/serine-rich splicing factor SCL25A transcript II [Sorghum
bicolor]
Length = 213
Score = 88.2 bits (217), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 59/126 (46%), Positives = 71/126 (56%), Gaps = 10/126 (7%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
SL V NL PDDLRR F + G V DIY+P+D +TRE +GF F+++FD DA DA
Sbjct: 37 TSLLVRNLRRDCRPDDLRRPFGKFGRVKDIYLPKDYYTREPKGFGFIQYFDPEDASDAKY 96
Query: 74 AMDGRMLDGRELRVQMARYGRPPSSSRSRGGRDRDRRRDRSRSRDRRYTRSRSFSSRSRS 133
MDG+ML GRE+ V A R + R R+R RSRS DRR SRS
Sbjct: 97 HMDGQMLLGREITVVFAEENR----KKPSDMRARERMSGRSRSYDRR------LRSRSPG 146
Query: 134 GSKSPR 139
S SPR
Sbjct: 147 YSDSPR 152
>gi|226501776|ref|NP_001148421.1| LOC100282036 [Zea mays]
gi|195619182|gb|ACG31421.1| splicing factor, arginine/serine-rich 2 [Zea mays]
Length = 218
Score = 88.2 bits (217), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 52/110 (47%), Positives = 71/110 (64%), Gaps = 5/110 (4%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
S+ V N+++RTT DDL +F+R G+V DIYIPRD T + RGFAFVR+ + +A DA+D
Sbjct: 18 FSILVLNVSFRTTADDLFPLFDRYGKVLDIYIPRDHRTGDPRGFAFVRYNYEDEARDAID 77
Query: 74 AMDGRMLDGRELRVQMARYGRPPSSSRSRGGR---DRDRRRDRSRSRDRR 120
+DG DGR L VQ A+YG P++ + GR + + R R RSR R
Sbjct: 78 GLDGXRFDGRALMVQFAKYG--PNAEKIHRGRITEENPKPRGRCRSRSPR 125
>gi|448878218|gb|AGE46072.1| arginine/serine-rich splicing factor SC26 transcript I [Zea mays]
Length = 218
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/110 (47%), Positives = 71/110 (64%), Gaps = 5/110 (4%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
S+ V N+++RTT DDL +F+R G+V DIYIPRD T + RGFAFVR+ + +A DA+D
Sbjct: 18 FSILVLNVSFRTTADDLFPLFDRYGKVLDIYIPRDHRTGDPRGFAFVRYNYEDEARDAID 77
Query: 74 AMDGRMLDGRELRVQMARYGRPPSSSRSRGGR---DRDRRRDRSRSRDRR 120
+DG DGR L VQ A+YG P++ + GR + + R R RSR R
Sbjct: 78 GLDGMRFDGRALMVQFAKYG--PNAEKIHRGRITEENPKPRGRCRSRSPR 125
>gi|412988955|emb|CCO15546.1| Splicing factor, arginine/serine-rich 2 [Bathycoccus prasinos]
Length = 296
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 62/91 (68%)
Query: 5 RPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFD 64
+ PP I + S+K+DNL++ T +++ +F GE+GD+Y+PR+ T+ RGFAFVR+ +
Sbjct: 49 KGPPDISNLHSVKIDNLSFDLTQEEITDMFASYGEIGDVYVPRNHHTQRMRGFAFVRYVE 108
Query: 65 KRDAEDALDAMDGRMLDGRELRVQMARYGRP 95
K+ A+ A+DAM + + GR +RV MA +P
Sbjct: 109 KQSADAAIDAMHEKEIAGRIIRVGMAEEKKP 139
>gi|209879626|ref|XP_002141253.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
gi|209556859|gb|EEA06904.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
Length = 266
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 56/81 (69%), Gaps = 1/81 (1%)
Query: 10 IEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAE 69
IEG SL V NL + T+P +RR FER G V D+Y+P D +TR RGF FV + D RDAE
Sbjct: 83 IEG-CSLLVRNLRFETSPSRVRRHFERYGTVRDVYLPLDYYTRRPRGFGFVEYMDPRDAE 141
Query: 70 DALDAMDGRMLDGRELRVQMA 90
DA++ +DG +LDG +RV +A
Sbjct: 142 DAVNNLDGSVLDGSTIRVVVA 162
>gi|83286039|ref|XP_729987.1| dentin phosphoryn [Plasmodium yoelii yoelii 17XNL]
gi|23489341|gb|EAA21552.1| dentin phosphoryn [Plasmodium yoelii yoelii]
Length = 793
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 59/82 (71%)
Query: 10 IEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAE 69
+E SL + NL++ T+PD +R++FE G++ D+Y+P D +TR RGF FV ++D + A+
Sbjct: 2 VENGCSLLIRNLSFETSPDKVRKIFEHFGKIRDVYLPLDHYTRRPRGFGFVEYYDPKHAK 61
Query: 70 DALDAMDGRMLDGRELRVQMAR 91
+AL+ ++ +DG+E+R+ +A+
Sbjct: 62 EALNILNNSKIDGKEIRIIVAQ 83
>gi|301118214|ref|XP_002906835.1| splicing factor, arginine/serine-rich, putative [Phytophthora
infestans T30-4]
gi|262108184|gb|EEY66236.1| splicing factor, arginine/serine-rich, putative [Phytophthora
infestans T30-4]
Length = 233
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 59/80 (73%)
Query: 12 GMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDA 71
G +SL V N++ R P+D+R+ FER GEV D+YIP+D +T+E +GFAFV F +R+AEDA
Sbjct: 5 GGISLLVRNISRRLRPEDIRKEFERYGEVRDVYIPKDFYTKEPKGFAFVEFRSEREAEDA 64
Query: 72 LDAMDGRMLDGRELRVQMAR 91
+DG +DGR++RV A+
Sbjct: 65 RRNLDGVRIDGRDIRVVFAQ 84
>gi|428673153|gb|EKX74066.1| serine/arginine rich splicing factor, putative [Babesia equi]
Length = 183
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 57/81 (70%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
+SL V NL Y T+PD +R +F R GE+ D+Y+P D +T++ RGF FV F+ + DA++AL
Sbjct: 13 ISLLVKNLKYETSPDKVRSLFSRYGEIRDVYLPLDYYTKKPRGFGFVEFYKEEDADEALR 72
Query: 74 AMDGRMLDGRELRVQMARYGR 94
MDG +DG ++ V A++GR
Sbjct: 73 GMDGEEIDGNKVEVFPAKHGR 93
>gi|357121831|ref|XP_003562621.1| PREDICTED: probable RNA-binding protein 19-like [Brachypodium
distachyon]
Length = 205
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/153 (44%), Positives = 86/153 (56%), Gaps = 14/153 (9%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
SL V NL P+DLRR F + G + D+YIPRD +TRE RGF FV++FD DA DA
Sbjct: 38 TSLLVRNLRRDCRPEDLRRPFGQFGRLKDVYIPRDYYTREPRGFGFVQYFDPEDAADAKY 97
Query: 74 AMDGRMLDGRELRVQMARYGRP-PSSSRSRG---GRDRDRRRD-----RSRSRDRRYTRS 124
MDG+++ GRE+ V A+ R PS R+R GR DRRR RS R R Y+RS
Sbjct: 98 YMDGQVVLGREIAVVFAQENRKHPSEMRTRESSRGRSYDRRRSLSPRGRSPFRGRSYSRS 157
Query: 125 RSFSSRSR-----SGSKSPRKARSKSIDRDNKH 152
S R S S+SP RS+S ++H
Sbjct: 158 PSPRYERRRFREDSYSRSPVDGRSRSGSPLHEH 190
>gi|124804262|ref|XP_001347950.1| conserved Plasmodium protein [Plasmodium falciparum 3D7]
gi|23496204|gb|AAN35863.1| conserved Plasmodium protein [Plasmodium falciparum 3D7]
Length = 914
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 58/82 (70%)
Query: 10 IEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAE 69
++ S+ + NL Y T+PD +R++FE G+V D+Y+P D +TR+ RGF FV +F+ + A+
Sbjct: 2 VDSGCSILIRNLNYDTSPDKVRKIFENVGKVKDVYLPLDHYTRKPRGFGFVEYFESKYAK 61
Query: 70 DALDAMDGRMLDGRELRVQMAR 91
+A++ ++ +DG E+R+ +A+
Sbjct: 62 EAINILNHSRIDGNEIRIIIAQ 83
>gi|156086728|ref|XP_001610772.1| Ser/Arg-rich splicing factor [Babesia bovis T2Bo]
gi|154798025|gb|EDO07204.1| Ser/Arg-rich splicing factor, putative [Babesia bovis]
Length = 188
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 54/81 (66%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
SL V NL Y T+PD LR F R GE+ D+Y+P D +TR+ RGF FV FF DA++A+
Sbjct: 12 ASLLVRNLKYETSPDQLRAAFSRFGEIRDVYLPLDYYTRKPRGFGFVEFFSHSDADEAMR 71
Query: 74 AMDGRMLDGRELRVQMARYGR 94
M G LDG ++ V +A++GR
Sbjct: 72 EMFGYELDGNKIEVFVAKHGR 92
>gi|212723388|ref|NP_001131976.1| Splicing factor, arginine/serine-rich 2 [Zea mays]
gi|194693082|gb|ACF80625.1| unknown [Zea mays]
gi|195620736|gb|ACG32198.1| splicing factor, arginine/serine-rich 2 [Zea mays]
gi|413955616|gb|AFW88265.1| Splicing factor, arginine/serine-rich 2 [Zea mays]
gi|448878236|gb|AGE46081.1| arginine/serine-rich splicing factor SCL25A transcript I [Zea mays]
Length = 216
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 51/77 (66%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
SL V NL PDDLRR F + G V DIY+P+D +TRE RGF F+++FD DA DA
Sbjct: 39 TSLLVRNLRRDCRPDDLRRPFGKFGPVKDIYLPKDYYTREPRGFGFIQYFDPEDASDAKY 98
Query: 74 AMDGRMLDGRELRVQMA 90
MDG+ML GRE+ V A
Sbjct: 99 YMDGKMLLGREIAVVFA 115
>gi|294868078|ref|XP_002765370.1| serine/arginine rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
gi|239865389|gb|EEQ98087.1| serine/arginine rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
Length = 204
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 57/89 (64%)
Query: 9 RIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDA 68
++ + S+KVD + R DDLR F + GE+GD++IP DR+T SRGF FVRF+++RDA
Sbjct: 5 QLNDLFSIKVDGIDERVRKDDLREAFSKFGEIGDVFIPLDRYTGVSRGFGFVRFYERRDA 64
Query: 69 EDALDAMDGRMLDGRELRVQMARYGRPPS 97
EDA+ MD + G + V A Y + S
Sbjct: 65 EDAIRDMDNKEFQGCRITVAAAMYNKESS 93
>gi|66362632|ref|XP_628282.1| splicing factor RRM domain containing protein; T22E16.120 SC35-like
splicing factor [Cryptosporidium parvum Iowa II]
gi|67590297|ref|XP_665474.1| dentin phosphoryn [Cryptosporidium hominis TU502]
gi|46229752|gb|EAK90570.1| splicing factor RRM domain containing protein; T22E16.120 SC35-like
splicing factor [Cryptosporidium parvum Iowa II]
gi|54656181|gb|EAL35244.1| dentin phosphoryn [Cryptosporidium hominis]
gi|323508677|dbj|BAJ77232.1| cgd7_940 [Cryptosporidium parvum]
gi|323510599|dbj|BAJ78193.1| cgd7_940 [Cryptosporidium parvum]
Length = 286
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 89/185 (48%), Gaps = 48/185 (25%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
SL V NL + T+P +R FER G V D+Y+P D +TR RGF FV + D RDA+DA++
Sbjct: 90 CSLLVRNLRFETSPGRVRHHFERYGPVRDVYLPLDYYTRRPRGFGFVEYMDPRDAQDAVN 149
Query: 74 AMDGRMLDGRELRVQMA---------------------RYGRPPS------------SSR 100
+DG +LDG +RV +A R G PPS
Sbjct: 150 RLDGSLLDGSTIRVVVAHDRRKSPETMRRIQRDSGRGPRMGGPPSRYDHRPSGGYPPEHG 209
Query: 101 SRGGRDRD-----RRRDRSRSRDRRYTRSRSFSSRS--------RSGSKSPRKARSKSID 147
RGGR RD RR+ R DR Y R +SSRS RS S+SP R SI
Sbjct: 210 YRGGRYRDDYYGGRRQGGYRDDDRNYRPKRRYSSRSPSYHSPRGRSVSRSP--YRGGSIS 267
Query: 148 RDNKH 152
R++ H
Sbjct: 268 REHSH 272
>gi|325179763|emb|CCA14166.1| splicing factor putative [Albugo laibachii Nc14]
Length = 207
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 57/81 (70%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
+SL + N++ R D+LR+ FE G+V D+YIPRD TRE +GFAFV F ++RDAE+AL
Sbjct: 7 ISLLIRNISRRMRSDELRKTFEEFGDVRDVYIPRDFHTREVKGFAFVEFKNERDAEEALR 66
Query: 74 AMDGRMLDGRELRVQMARYGR 94
+DG LDGRE+ V A+ R
Sbjct: 67 NLDGSRLDGREITVVFAQEKR 87
>gi|448878413|gb|AGE46169.1| arginine/serine-rich splicing factor SC39 transcript III
[Physcomitrella patens subsp. patens]
Length = 104
Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 64/91 (70%), Gaps = 1/91 (1%)
Query: 3 YGRP-PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
+GR PP I SL V N+T+RT+ DDL +F+R G+V DI+IPRDR T ESRGFAFVR
Sbjct: 4 FGRAGPPDIRDTYSLLVLNITFRTSADDLYPLFDRYGKVVDIFIPRDRRTGESRGFAFVR 63
Query: 62 FFDKRDAEDALDAMDGRMLDGRELRVQMARY 92
+ +A+ A++ +DGR +DGR + VQ R+
Sbjct: 64 YKYSDEAQKAIERLDGRAVDGRNIVVQPYRF 94
>gi|294942803|ref|XP_002783687.1| serine/arginine rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
gi|239896223|gb|EER15483.1| serine/arginine rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
Length = 691
Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 56/86 (65%)
Query: 9 RIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDA 68
++ + S+KVD + R DDLR F + GE+GD++IP DR+T SRGF FVRF+++RDA
Sbjct: 506 QLNDLFSVKVDGIDERVRKDDLREAFSKFGEIGDVFIPVDRYTGVSRGFGFVRFYERRDA 565
Query: 69 EDALDAMDGRMLDGRELRVQMARYGR 94
EDA+ MD + G + V A Y +
Sbjct: 566 EDAIRDMDNKEFQGNRITVAAAMYNK 591
>gi|294921861|ref|XP_002778742.1| serine/arginine rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
gi|239887462|gb|EER10537.1| serine/arginine rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
Length = 840
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 60/95 (63%), Gaps = 2/95 (2%)
Query: 9 RIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDA 68
++ + S+KVD + R DDLR F + GE+GD++IP DR+T SRGF FVRF+++RDA
Sbjct: 748 QLNDLFSVKVDGIDERVRKDDLREAFSKFGEIGDVFIPVDRYTGVSRGFGFVRFYERRDA 807
Query: 69 EDALDAMDGRMLDGRELRVQMARYGRPPSSSRSRG 103
EDA+ MD + G + V A Y + SS +G
Sbjct: 808 EDAIRDMDNKEFQGNRITVAAAMYNK--ESSYGKG 840
>gi|357017461|gb|AET50759.1| hypothetical protein [Eimeria tenella]
Length = 196
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/134 (41%), Positives = 77/134 (57%), Gaps = 7/134 (5%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
+SL V NL+Y+T+P+ +R F G V D+Y+P D +R RGF FV F+ + DAE AL+
Sbjct: 10 MSLLVRNLSYQTSPEAVRSAFAVHGSVKDVYLPLDYHSRMPRGFGFVEFWHREDAERALE 69
Query: 74 AMDGRMLDGRELRVQMARYGR-PPSSSRSRGGRDRDRRRDRSRSR----DRRYTRSRSFS 128
MDG LDG+ + V +A+ GR P + R +R RR R R +RRY+R S
Sbjct: 70 KMDGFELDGKAIEVAIAKKGRSAPQQMKQRD--ERGRREGSPRGRRYEDERRYSRMDSPP 127
Query: 129 SRSRSGSKSPRKAR 142
R R GS+ R R
Sbjct: 128 RRGRYGSRERRDYR 141
>gi|414869213|tpg|DAA47770.1| TPA: hypothetical protein ZEAMMB73_478975 [Zea mays]
Length = 283
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/129 (39%), Positives = 71/129 (55%), Gaps = 29/129 (22%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKR 66
PP I SL V N+++RTT DDL +FERCG+V D++IPRDR T +SRGFAFVR+
Sbjct: 9 PPDIRDTFSLLVLNISFRTTADDLFPLFERCGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
Query: 67 DAEDALDAMD---------------------------GRMLDGRELRVQMARYGRPPSSS 99
+A+ A+D +D GR +DGR + VQ A+YG P++
Sbjct: 69 EAQKAIDRLDGGFFFDCAPHVGILELLFLIIVDFLGAGRNVDGRNIMVQFAKYG--PNAV 126
Query: 100 RSRGGRDRD 108
GR ++
Sbjct: 127 PIHKGRVKE 135
>gi|363807232|ref|NP_001242100.1| uncharacterized protein LOC100779321 [Glycine max]
gi|255635455|gb|ACU18080.1| unknown [Glycine max]
Length = 253
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/210 (34%), Positives = 93/210 (44%), Gaps = 65/210 (30%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
SL V NL + P+DLRR F + G + DIY+P+D +T E RGF FV+F D DA DA
Sbjct: 41 TSLLVRNLRHDCRPEDLRRPFGQFGPLKDIYLPKDYYTGEPRGFGFVQFVDPADAADAKY 100
Query: 74 AMDGRMLDGRELRVQMARYGR-PPSSSRSR----------------------------GG 104
MDG++L GREL V A R P+ R+R
Sbjct: 101 HMDGQVLLGRELTVVFAEENRKKPTEMRTRERRGRFSDRRRSPPRYSRSPRYSRSPRYSR 160
Query: 105 RDRDRRRDRSRSRD-----------------RRYTRSRSFS------------------- 128
R R RS SRD RRY+R RS+S
Sbjct: 161 SPPPRHRSRSHSRDYYSPKRREYSRSVSPEGRRYSRERSYSQHNRERSFSRSPPYNGGSR 220
Query: 129 SRSRSGSKSPRKARSKSIDRDNKHERNGRS 158
SRS+S +K P ++RS S++RD K GRS
Sbjct: 221 SRSQSPAKGPGRSRSPSLNRDEKEPARGRS 250
>gi|410910852|ref|XP_003968904.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Takifugu
rubripes]
Length = 238
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 60/89 (67%), Gaps = 5/89 (5%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRF 62
Y RPP SL V N++ + P+DLRR F R G + D+YIP D +TR+ RGFA+++F
Sbjct: 4 YMRPP-----NTSLFVRNISDESRPEDLRREFGRYGPIVDVYIPLDFYTRQPRGFAYIQF 58
Query: 63 FDKRDAEDALDAMDGRMLDGRELRVQMAR 91
D RDAEDAL ++D + + GR++ +Q A+
Sbjct: 59 EDVRDAEDALHSLDRKWVCGRQIEIQFAQ 87
>gi|356553015|ref|XP_003544854.1| PREDICTED: uncharacterized protein LOC100775883 isoform 1 [Glycine
max]
gi|356553017|ref|XP_003544855.1| PREDICTED: uncharacterized protein LOC100775883 isoform 2 [Glycine
max]
Length = 249
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 95/206 (46%), Gaps = 61/206 (29%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
SL V NL + P+DLRR F + G + DIY+P+D +T E RGF FV++ D DA DA
Sbjct: 41 TSLLVRNLRHDCRPEDLRRPFGQFGPLKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKY 100
Query: 74 AMDGRMLDGRELRVQMARYGR-PPSSSRSRGGRDRD------------------------ 108
MDG++L GREL V A R P+ R+R R R
Sbjct: 101 HMDGQVLLGRELTVVFAEENRKKPTEMRTRERRGRFYDRRRSPPRYSRSPRYSRSPPPRH 160
Query: 109 --------------RRRDRSRS---RDRRYTRSRSFS-------------------SRSR 132
+RR+ SRS DRRY+R RSFS SRS+
Sbjct: 161 RSRSRSRDYYSPPAKRREYSRSVSPEDRRYSRERSFSQHSRERSYSRSPPYNGGSRSRSQ 220
Query: 133 SGSKSPRKARSKSIDRDNKHERNGRS 158
S +K P ++RS S +RD + GRS
Sbjct: 221 SPAKGPGQSRSPSPNRDGREPARGRS 246
>gi|255582554|ref|XP_002532060.1| serine/arginine rich splicing factor, putative [Ricinus communis]
gi|223528264|gb|EEF30315.1| serine/arginine rich splicing factor, putative [Ricinus communis]
Length = 246
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 53/81 (65%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
SL V NL + P+DLRR FE+ G + DIY+PRD +T E RGF FV++ D +DA +A
Sbjct: 42 TSLLVRNLRHDCRPEDLRRPFEQFGALKDIYLPRDYYTGEPRGFGFVQYADPQDAAEAKH 101
Query: 74 AMDGRMLDGRELRVQMARYGR 94
MDGR+L GREL V A R
Sbjct: 102 HMDGRVLLGRELTVVFAEENR 122
>gi|91075992|ref|XP_970765.1| PREDICTED: similar to RNA binding motif protein 19 [Tribolium
castaneum]
gi|270014609|gb|EFA11057.1| hypothetical protein TcasGA2_TC004651 [Tribolium castaneum]
Length = 231
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 62/98 (63%), Gaps = 1/98 (1%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
++K+ NL Y+ +DL+++F G + DIY+PR R+T +RGFAFVRF + DA A+
Sbjct: 132 TVKITNLNYKIDEEDLKKIFSGIGPIADIYVPRLRYTHLNRGFAFVRFHREADALYAISK 191
Query: 75 MDGRMLDGRELRVQMARYGRPPSSSR-SRGGRDRDRRR 111
+D + + GR + + MAR G PP + + G DR RRR
Sbjct: 192 LDRKEVQGRNMCLAMARLGAPPPFRKYAHGTFDRFRRR 229
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 57/110 (51%), Gaps = 2/110 (1%)
Query: 11 EGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAED 70
E ++V NL + TT L+ F CG+V + I R+ T SRG V++ RDA +
Sbjct: 20 EQYYIVRVANLDFGTTEATLKSFFSSCGDVHECVISRNIDTNTSRGIGHVKYLRVRDALE 79
Query: 71 ALDAMDGRMLDGRELRVQMARYGRPPSSSRSRGGRDRDRRRDRSRSRDRR 120
A ++G +LDGR L V + + + ++ RDR +RR + S D +
Sbjct: 80 AARNLNGEVLDGRTLHVYL--HDKALRRRLAQQIRDRAKRRCETASADNK 127
>gi|302834399|ref|XP_002948762.1| hypothetical protein VOLCADRAFT_73973 [Volvox carteri f.
nagariensis]
gi|300265953|gb|EFJ50142.1| hypothetical protein VOLCADRAFT_73973 [Volvox carteri f.
nagariensis]
Length = 274
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 59/92 (64%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRF 62
YG + VS+ V N+ T +DLR FE+ GE+ D+YIPRD +T+ SRGF F+ F
Sbjct: 10 YGPASAGVRNKVSVLVRNIPLNYTAEDLRAKFEKFGELRDVYIPRDYYTQRSRGFGFIEF 69
Query: 63 FDKRDAEDALDAMDGRMLDGRELRVQMARYGR 94
D RDA++A+ D MLDGRE+ V +++ GR
Sbjct: 70 RDARDADEAIYQTDRTMLDGREINVCLSKEGR 101
>gi|302834547|ref|XP_002948836.1| hypothetical protein VOLCADRAFT_120666 [Volvox carteri f.
nagariensis]
gi|300266027|gb|EFJ50216.1| hypothetical protein VOLCADRAFT_120666 [Volvox carteri f.
nagariensis]
Length = 262
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 54/81 (66%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
VSL V NL +DLR FE+ GE+ D+YIPRD +T+ RGF FV F D RDAEDA+
Sbjct: 17 VSLVVRNLPLDIRAEDLRSKFEKYGELKDVYIPRDYYTQRPRGFGFVEFKDTRDAEDAMY 76
Query: 74 AMDGRMLDGRELRVQMARYGR 94
++D ++GRE+ V +R GR
Sbjct: 77 SLDRSTINGREISVTFSREGR 97
>gi|307219223|ref|NP_001182527.1| splicing factor, arginine/serine-rich 13B [Sus scrofa]
Length = 261
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 57/89 (64%), Gaps = 5/89 (5%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRF 62
Y RPP SL V N+ T P+DLRR F R G + D+YIP D +TR RGFA+V+F
Sbjct: 4 YTRPP-----NTSLFVRNVADATRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQF 58
Query: 63 FDKRDAEDALDAMDGRMLDGRELRVQMAR 91
D RDAEDAL ++ + + GR++ +Q A+
Sbjct: 59 EDVRDAEDALYNLNRKWVCGRQIEIQFAQ 87
>gi|226493261|ref|NP_001151991.1| LOC100285628 [Zea mays]
gi|195651649|gb|ACG45292.1| splicing factor, arginine/serine-rich 4 [Zea mays]
gi|448878242|gb|AGE46084.1| arginine/serine-rich splicing factor SCL25B transcript I [Zea mays]
gi|448878246|gb|AGE46086.1| arginine/serine-rich splicing factor SCL25B transcript III [Zea
mays]
gi|448878250|gb|AGE46088.1| arginine/serine-rich splicing factor SCL25B transcript V [Zea mays]
gi|448878254|gb|AGE46090.1| arginine/serine-rich splicing factor SCL25B transcript VII [Zea
mays]
gi|448878256|gb|AGE46091.1| arginine/serine-rich splicing factor SCL25B transcript VIII [Zea
mays]
Length = 209
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/132 (44%), Positives = 77/132 (58%), Gaps = 12/132 (9%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
SL V NL P+DLRR F + G V DIY+PRD +T + RGF FV+++D DA DA
Sbjct: 37 TSLLVRNLRRDCRPEDLRRPFGQFGRVKDIYLPRDYYTGDPRGFGFVQYYDPADAADAKY 96
Query: 74 AMDGRMLDGRELRVQMARYGRPPSSSRSRGGRDRDRRRDRSRSRDRRYTRSRS------- 126
MDG+++ GR++ V A R + + R RDR R S DRRY+RSRS
Sbjct: 97 YMDGQVVLGRQITVVFAEENR----KKPQEMRARDRVRGHSYD-DRRYSRSRSPHYYRGR 151
Query: 127 FSSRSRSGSKSP 138
SRS+S S+SP
Sbjct: 152 SPSRSQSYSRSP 163
>gi|348519627|ref|XP_003447331.1| PREDICTED: serine/arginine-rich splicing factor 10-like
[Oreochromis niloticus]
Length = 240
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 60/89 (67%), Gaps = 5/89 (5%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRF 62
Y RPP SL V N++ + P+DLRR F R G + D+YIP D +TR+ RGFA+++F
Sbjct: 4 YMRPP-----NTSLFVRNISDESRPEDLRREFGRYGPIVDVYIPLDFYTRQPRGFAYIQF 58
Query: 63 FDKRDAEDALDAMDGRMLDGRELRVQMAR 91
D RDAEDAL ++D + + GR++ +Q A+
Sbjct: 59 EDVRDAEDALHSLDRKWVCGRQIEIQFAQ 87
>gi|221056270|ref|XP_002259273.1| RNA binding protein [Plasmodium knowlesi strain H]
gi|193809344|emb|CAQ40046.1| RNA binding protein, putative [Plasmodium knowlesi strain H]
Length = 946
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 77/137 (56%), Gaps = 20/137 (14%)
Query: 10 IEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAE 69
+E SL + NL++ T+PD +R++F+ G+V D+Y+P D +TR RGF FV +++ + A+
Sbjct: 2 VENGCSLLIKNLSFHTSPDKIRKIFQSFGKVRDVYLPLDHYTRRPRGFGFVEYYEPQYAK 61
Query: 70 DALDAMDGRMLDGRELRVQMAR-----------YGRPPSSSRSRG--------GRDRDRR 110
+AL ++ +DG E+++ +A+ Y R R RG G+ R+
Sbjct: 62 EALITLNHTKIDGNEVKIIIAQNRRKSPETMKMYQRSVHKGRYRGHPYRSDSSGKRIHRK 121
Query: 111 RDRSRSRDRR-YTRSRS 126
RD+S RR Y RS+S
Sbjct: 122 RDKSNEEGRRKYYRSKS 138
>gi|170585176|ref|XP_001897362.1| RNA recognition motif domain containing protein [Brugia malayi]
gi|158595237|gb|EDP33806.1| RNA recognition motif domain containing protein [Brugia malayi]
Length = 340
Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 65/104 (62%), Gaps = 1/104 (0%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
+L V + Y PDDLR +FE+ G V D+YIP D +TRESRGFA+V+F RDAEDAL
Sbjct: 15 TLYVRQVHYSARPDDLRALFEQMGPVRDVYIPLDYYTRESRGFAYVKFEFTRDAEDALRE 74
Query: 75 MDGRMLDGRELRVQMARYGRPPSSS-RSRGGRDRDRRRDRSRSR 117
++G + GR + V+ A R + R+R + R R+R RSR
Sbjct: 75 LNGTSILGRRIEVEWAEGQRKTKTEMRARDSYNSYRVRNRYRSR 118
>gi|399217453|emb|CCF74340.1| unnamed protein product [Babesia microti strain RI]
Length = 203
Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 56/90 (62%)
Query: 5 RPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFD 64
RP R +SL V NL Y TTP+ LR FE+ G + D+YIP + +T++ RGF FV F D
Sbjct: 26 RPSYRGGRTMSLLVRNLKYETTPEILREAFEKFGPIRDVYIPLEYYTKKPRGFGFVEFHD 85
Query: 65 KRDAEDALDAMDGRMLDGRELRVQMARYGR 94
RDA AL MDG LDG ++ V A+ GR
Sbjct: 86 FRDANMALREMDGGELDGNKIEVFAAKRGR 115
>gi|348688880|gb|EGZ28694.1| hypothetical protein PHYSODRAFT_537360 [Phytophthora sojae]
Length = 460
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 59/80 (73%)
Query: 12 GMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDA 71
G +SL V N++ R P+D+R+ FER GEV D+YIP+D +T+E +GFAFV F +R+A+DA
Sbjct: 230 GGISLLVRNISRRLRPEDIRKEFERYGEVRDVYIPKDYYTKEPKGFAFVEFRSEREADDA 289
Query: 72 LDAMDGRMLDGRELRVQMAR 91
+DG +DGR++RV A+
Sbjct: 290 RRNLDGVRIDGRDIRVVFAQ 309
>gi|148612890|ref|NP_542781.3| serine/arginine-rich splicing factor 12 [Homo sapiens]
gi|47606193|sp|Q8WXF0.1|SRS12_HUMAN RecName: Full=Serine/arginine-rich splicing factor 12; AltName:
Full=35 kDa SR repressor protein; Short=SRrp35;
AltName: Full=Splicing factor, arginine/serine-rich
13B; AltName: Full=Splicing factor,
arginine/serine-rich 19
gi|18034491|gb|AAL57515.1|AF449428_1 SRrp35 [Homo sapiens]
gi|189054199|dbj|BAG36719.1| unnamed protein product [Homo sapiens]
gi|261859278|dbj|BAI46161.1| 35 kDa SR repressor protein [synthetic construct]
gi|380809714|gb|AFE76732.1| serine/arginine-rich splicing factor 12 [Macaca mulatta]
gi|384945376|gb|AFI36293.1| serine/arginine-rich splicing factor 12 [Macaca mulatta]
Length = 261
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 57/89 (64%), Gaps = 5/89 (5%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRF 62
Y RPP SL + N+ T P+DLRR F R G + D+YIP D +TR RGFA+V+F
Sbjct: 4 YTRPP-----NTSLFIRNVADATRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQF 58
Query: 63 FDKRDAEDALDAMDGRMLDGRELRVQMAR 91
D RDAEDAL ++ + + GR++ +Q A+
Sbjct: 59 EDVRDAEDALYNLNRKWVCGRQIEIQFAQ 87
>gi|387018626|gb|AFJ51431.1| Serine/arginine-rich splicing factor 12-like [Crotalus
adamanteus]
Length = 234
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 57/89 (64%), Gaps = 5/89 (5%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRF 62
Y RPP SL V N+ T P+DLRR F R G V D+YIP D +TR RGFA+++F
Sbjct: 4 YTRPP-----NTSLFVRNVADATRPEDLRREFGRYGPVVDVYIPLDFYTRRPRGFAYIQF 58
Query: 63 FDKRDAEDALDAMDGRMLDGRELRVQMAR 91
D RDAEDAL ++ + + GR++ +Q A+
Sbjct: 59 EDVRDAEDALYNLNRKWVCGRQIEIQFAQ 87
>gi|449442606|ref|XP_004139072.1| PREDICTED: serine/arginine-rich splicing factor 33-like [Cucumis
sativus]
gi|449528235|ref|XP_004171111.1| PREDICTED: serine/arginine-rich splicing factor 33-like [Cucumis
sativus]
Length = 285
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 50/77 (64%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
SL V NL++ P+DLRR F + G + DIY+P+D +T E RGF FV++ D DA DA
Sbjct: 36 TSLLVRNLSHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKH 95
Query: 74 AMDGRMLDGRELRVQMA 90
MDG +L GREL V A
Sbjct: 96 HMDGCVLLGRELTVVFA 112
>gi|393906773|gb|EFO27553.2| hypothetical protein LOAG_00933 [Loa loa]
Length = 344
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 64/104 (61%), Gaps = 1/104 (0%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
+L V + Y PDDLR +FER G V D+YIP D +TRESRGFA+V+F RDAEDAL
Sbjct: 15 TLYVRQVHYSARPDDLRALFERMGPVRDVYIPLDYYTRESRGFAYVKFEFTRDAEDALRK 74
Query: 75 MDGRMLDGRELRVQMARYGRPPSSS-RSRGGRDRDRRRDRSRSR 117
++G + GR + V+ A R + R+R R R+R RSR
Sbjct: 75 LNGASILGRPIEVEWAEGQRKTKTEMRARDSYSSYRVRNRYRSR 118
>gi|198438407|ref|XP_002126373.1| PREDICTED: similar to FUS interacting protein (serine-arginine
rich) 1 [Ciona intestinalis]
Length = 221
Score = 81.6 bits (200), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 50/77 (64%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
SL V N+ PDDLRR F R G V D+YIP D + R RGFA+++F D RDAEDAL
Sbjct: 8 ASLFVRNIADNIRPDDLRREFVRFGPVSDVYIPLDYYNRRPRGFAYIQFEDTRDAEDALY 67
Query: 74 AMDGRMLDGRELRVQMA 90
AMD + + GR + VQ A
Sbjct: 68 AMDRKWICGRYIEVQFA 84
>gi|68065706|ref|XP_674837.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56493667|emb|CAH97904.1| conserved hypothetical protein [Plasmodium berghei]
Length = 245
Score = 81.6 bits (200), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 58/82 (70%), Gaps = 1/82 (1%)
Query: 10 IEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAE 69
+E SL + NL++ T PD +R++FE G++ D+Y+P D +TR RGF FV ++D + A+
Sbjct: 2 VENGCSLLIRNLSFET-PDKVRKIFEHFGKIRDVYLPLDHYTRRPRGFGFVEYYDPKHAK 60
Query: 70 DALDAMDGRMLDGRELRVQMAR 91
+AL+ ++ +DG+E+R+ +A+
Sbjct: 61 EALNILNNSKIDGKEIRIIVAQ 82
>gi|56118384|ref|NP_001007946.1| serine/arginine-rich splicing factor 12 [Xenopus (Silurana)
tropicalis]
gi|51513232|gb|AAH80452.1| serine-arginine repressor protein (35 kDa) [Xenopus (Silurana)
tropicalis]
gi|89272962|emb|CAJ83214.1| serine-arginine repressor protein (35 kDa) [Xenopus (Silurana)
tropicalis]
Length = 253
Score = 81.6 bits (200), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 57/89 (64%), Gaps = 5/89 (5%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRF 62
Y RPP SL V N+ T P+DLRR F R G + D+Y+P D +TR RGFA+++F
Sbjct: 4 YSRPP-----NTSLFVRNVADATRPEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYIQF 58
Query: 63 FDKRDAEDALDAMDGRMLDGRELRVQMAR 91
D RDAEDAL ++ + + GR++ +Q A+
Sbjct: 59 EDVRDAEDALYNLNRKWVCGRQIEIQFAQ 87
>gi|68063653|ref|XP_673822.1| Ser/Arg-rich splicing factor [Plasmodium berghei strain ANKA]
gi|56491949|emb|CAH95915.1| Ser/Arg-rich splicing factor, putative [Plasmodium berghei]
Length = 297
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 56/90 (62%), Gaps = 5/90 (5%)
Query: 5 RPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFD 64
RP P +SL + L + T+P +R F++ G + D+Y+P D +T+E RGF FV F+D
Sbjct: 8 RPQP-----MSLLIRKLKFNTSPSMVRDKFKKFGAIKDVYLPIDYYTKEPRGFGFVEFYD 62
Query: 65 KRDAEDALDAMDGRMLDGRELRVQMARYGR 94
+DAE AL M+G LDG + V +A+ GR
Sbjct: 63 PKDAEQALKEMNGSELDGNRIEVFVAQKGR 92
>gi|449684562|ref|XP_002161704.2| PREDICTED: serine/arginine-rich splicing factor 12-like, partial
[Hydra magnipapillata]
Length = 131
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 54/88 (61%), Gaps = 5/88 (5%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRF 62
Y RPP SL + NL+ T DDLRR+F + G + DIYIP D +TRE RGF +V+F
Sbjct: 6 YARPP-----NTSLYIRNLSSSTRSDDLRRMFAKYGPIRDIYIPLDYYTREPRGFCYVQF 60
Query: 63 FDKRDAEDALDAMDGRMLDGRELRVQMA 90
D RDAEDAL L GREL +Q A
Sbjct: 61 EDIRDAEDALYHESHARLHGRELDIQYA 88
>gi|22902265|gb|AAH37591.1| FUS interacting protein (serine-arginine rich) 1 [Mus musculus]
Length = 261
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 65/105 (61%), Gaps = 6/105 (5%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRF 62
Y RPP SL V N+ T +DLRR F R G + D+Y+P D +TR RGFA+V+F
Sbjct: 4 YLRPP-----NTSLFVRNVADDTQSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQF 58
Query: 63 FDKRDAEDALDAMDGRMLDGRELRVQMARYGR-PPSSSRSRGGRD 106
D RDAEDAL +D + + GR++ +Q A+ R P+ +++ GR+
Sbjct: 59 EDVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEGRN 103
>gi|449488891|ref|XP_004174435.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 10 [Taeniopygia guttata]
Length = 262
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 65/105 (61%), Gaps = 6/105 (5%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRF 62
Y RPP SL V N+ T +DLRR F R G + D+Y+P D +TR RGFA+V+F
Sbjct: 4 YMRPP-----XTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQF 58
Query: 63 FDKRDAEDALDAMDGRMLDGRELRVQMARYGR-PPSSSRSRGGRD 106
D RDAEDAL +D + + GR++ +Q A+ R P+ +++ GR+
Sbjct: 59 EDVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEGRN 103
>gi|208973274|ref|NP_001129183.1| 35 kDa SR repressor protein [Rattus norvegicus]
Length = 261
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 57/89 (64%), Gaps = 5/89 (5%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRF 62
Y RPP SL V N+ T P+DLRR F R G + D+YIP D ++R RGFA+V+F
Sbjct: 4 YTRPP-----NTSLFVRNVADATRPEDLRREFGRYGPIVDVYIPLDFYSRRPRGFAYVQF 58
Query: 63 FDKRDAEDALDAMDGRMLDGRELRVQMAR 91
D RDAEDAL ++ + + GR++ +Q A+
Sbjct: 59 EDVRDAEDALYNLNRKWVCGRQIEIQFAQ 87
>gi|383415877|gb|AFH31152.1| serine/arginine-rich splicing factor 12 [Macaca mulatta]
Length = 261
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 57/89 (64%), Gaps = 5/89 (5%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRF 62
Y RPP SL + N+ T P+DLRR F R G + D+YIP D +TR RGFA+V+F
Sbjct: 4 YTRPP-----NTSLFIRNVADATRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQF 58
Query: 63 FDKRDAEDALDAMDGRMLDGRELRVQMAR 91
D R+AEDAL ++ + + GR++ +Q A+
Sbjct: 59 EDVREAEDALYNLNRKWVCGRQIEIQFAQ 87
>gi|71897267|ref|NP_001026077.1| splicing factor, arginine/serine-rich 13A [Gallus gallus]
gi|53126728|emb|CAG30979.1| hypothetical protein RCJMB04_1g4 [Gallus gallus]
Length = 262
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 65/105 (61%), Gaps = 6/105 (5%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRF 62
Y RPP SL V N+ T +DLRR F R G + D+Y+P D +TR RGFA+V+F
Sbjct: 4 YLRPP-----NTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQF 58
Query: 63 FDKRDAEDALDAMDGRMLDGRELRVQMARYGR-PPSSSRSRGGRD 106
D RDAEDAL +D + + GR++ +Q A+ R P+ +++ GR+
Sbjct: 59 EDVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEGRN 103
>gi|156094342|ref|XP_001613208.1| Ser/Arg-rich splicing factor [Plasmodium vivax Sal-1]
gi|148802082|gb|EDL43481.1| Ser/Arg-rich splicing factor, putative [Plasmodium vivax]
Length = 328
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 53/81 (65%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
+SL + L Y T+P +R F++ G + D+Y+P D +T+E RGF FV F+D +DAE AL
Sbjct: 12 MSLLIRKLKYDTSPSMVREKFKKYGAIKDVYLPIDYYTKEPRGFGFVEFYDPKDAEQALK 71
Query: 74 AMDGRMLDGRELRVQMARYGR 94
M+G +DG + V +A+ GR
Sbjct: 72 EMNGSEIDGNRIEVFVAQKGR 92
>gi|389584299|dbj|GAB67032.1| Ser/Arg-rich splicing factor [Plasmodium cynomolgi strain B]
Length = 352
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 53/81 (65%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
+SL + L Y T+P +R F++ G + D+Y+P D +T+E RGF FV F+D +DAE AL
Sbjct: 12 MSLLIRKLKYDTSPSMVREKFKKFGAIKDVYLPIDYYTKEPRGFGFVEFYDPKDAEQALK 71
Query: 74 AMDGRMLDGRELRVQMARYGR 94
M+G +DG + V +A+ GR
Sbjct: 72 EMNGSEIDGNRIEVFVAQKGR 92
>gi|357112219|ref|XP_003557907.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E-like [Brachypodium
distachyon]
Length = 219
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 52/81 (64%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
SL V NL PDDLRR F + G + DIY+PRD +T+E RGF F++++D DA DA
Sbjct: 37 TSLLVRNLRRDCRPDDLRRPFGKFGRLKDIYLPRDYYTQEPRGFGFIQYYDPEDAADAQY 96
Query: 74 AMDGRMLDGRELRVQMARYGR 94
MDG++L GRE+ V A R
Sbjct: 97 HMDGQILLGREVAVVFAEENR 117
>gi|297847894|ref|XP_002891828.1| hypothetical protein ARALYDRAFT_892527 [Arabidopsis lyrata subsp.
lyrata]
gi|297337670|gb|EFH68087.1| hypothetical protein ARALYDRAFT_892527 [Arabidopsis lyrata subsp.
lyrata]
Length = 289
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 49/77 (63%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
SL V NL + +DLR+ FE+ G V DIY+PRD +T + RGF FV+F D DA DA
Sbjct: 36 TSLLVRNLRHDCRQEDLRKSFEQFGPVKDIYLPRDYYTGDPRGFGFVQFMDPADAADAKH 95
Query: 74 AMDGRMLDGRELRVQMA 90
MDG +L GREL V A
Sbjct: 96 HMDGYLLLGRELTVVFA 112
>gi|294946599|ref|XP_002785125.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239898581|gb|EER16921.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 114
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 56/89 (62%)
Query: 9 RIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDA 68
++ + S+KVD + R DDLR F + GE+GD++IP DR+T SRGF FVRF+++RDA
Sbjct: 5 QLNDLFSIKVDGIDERVRKDDLREAFSKFGEIGDVFIPLDRYTGVSRGFGFVRFYERRDA 64
Query: 69 EDALDAMDGRMLDGRELRVQMARYGRPPS 97
EDA+ MD + G V A Y + S
Sbjct: 65 EDAIRDMDNKEFQGCRHTVAAAMYNKESS 93
>gi|15231285|ref|NP_187966.1| SC35-like splicing factor 30A [Arabidopsis thaliana]
gi|13878011|gb|AAK44083.1|AF370268_1 putative serine/arginine-rich protein [Arabidopsis thaliana]
gi|11994559|dbj|BAB02599.1| unnamed protein product [Arabidopsis thaliana]
gi|17104623|gb|AAL34200.1| putative serine/arginine-rich protein [Arabidopsis thaliana]
gi|332641854|gb|AEE75375.1| SC35-like splicing factor 30A [Arabidopsis thaliana]
Length = 262
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 57/95 (60%), Gaps = 3/95 (3%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
SL V NL + +DLRR FE+ G V DIY+PRD +T + RGF F++F D DA +A
Sbjct: 37 TSLLVRNLRHDCRQEDLRRPFEQFGPVKDIYLPRDYYTGDPRGFGFIQFMDPADAAEAKH 96
Query: 74 AMDGRMLDGRELRVQMARYGRPPSS---SRSRGGR 105
MDG +L GREL V A R + +R RGGR
Sbjct: 97 QMDGYLLLGRELTVVFAEENRKKPTEMRTRDRGGR 131
>gi|449685942|ref|XP_002169071.2| PREDICTED: serine/arginine-rich splicing factor 10-like [Hydra
magnipapillata]
Length = 171
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 57/81 (70%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
S+ V N+ + +DLRR+FE+ G++ D+YIP D +TRE RGFA+V+F + DAEDA+D
Sbjct: 10 TSVFVRNVHHDVRSEDLRRIFEKYGDISDVYIPLDYYTREPRGFAYVQFDYEDDAEDAVD 69
Query: 74 AMDGRMLDGRELRVQMARYGR 94
+DG L GR++ + AR GR
Sbjct: 70 GLDGTTLFGRQIFCKNARGGR 90
>gi|355557671|gb|EHH14451.1| hypothetical protein EGK_00378 [Macaca mulatta]
gi|355745027|gb|EHH49652.1| hypothetical protein EGM_00350 [Macaca fascicularis]
Length = 261
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 65/105 (61%), Gaps = 6/105 (5%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRF 62
Y RPP SL V N+ T +DLRR F R G + D+Y+P D +TR RGFA+V+F
Sbjct: 4 YLRPP-----NTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQF 58
Query: 63 FDKRDAEDALDAMDGRMLDGRELRVQMARYGR-PPSSSRSRGGRD 106
D RDAEDAL +D + + GR++ +Q A+ R P+ +++ GR+
Sbjct: 59 EDVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEGRN 103
>gi|126328572|ref|XP_001362618.1| PREDICTED: serine/arginine-rich splicing factor 10-like
[Monodelphis domestica]
Length = 262
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 65/105 (61%), Gaps = 6/105 (5%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRF 62
Y RPP SL V N+ T +DLRR F R G + D+Y+P D +TR RGFA+V+F
Sbjct: 4 YLRPP-----NTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQF 58
Query: 63 FDKRDAEDALDAMDGRMLDGRELRVQMARYGR-PPSSSRSRGGRD 106
D RDAEDAL +D + + GR++ +Q A+ R P+ +++ GR+
Sbjct: 59 EDVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEGRN 103
>gi|115473547|ref|NP_001060372.1| Os07g0633200 [Oryza sativa Japonica Group]
gi|33146902|dbj|BAC79901.1| putative SC35-like splicing factor SCL30a [Oryza sativa Japonica
Group]
gi|113611908|dbj|BAF22286.1| Os07g0633200 [Oryza sativa Japonica Group]
gi|215692446|dbj|BAG87866.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 213
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/117 (47%), Positives = 70/117 (59%), Gaps = 7/117 (5%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
SL V NL P+DLRR F + G + DIYIPRD ++ E RGF FV+++D DA DA
Sbjct: 38 TSLLVRNLRRDCRPEDLRRPFGQFGRLKDIYIPRDYYSGEPRGFGFVQYYDPDDAADAKY 97
Query: 74 AMDGRMLDGRELRVQMARYGR-PPSSSRSRGGRDRDR-RRDRSRSRDRRYTRSRSFS 128
MDG+++ GRE+ V A R PS RS RDR R RS D+RY+RS +S
Sbjct: 98 YMDGQVILGREVAVVFAEENRKKPSEMRS-----RDRISGSRGRSYDQRYSRSPRYS 149
>gi|16905517|ref|NP_473357.1| serine/arginine-rich splicing factor 10 isoform 2 [Homo sapiens]
gi|122937372|ref|NP_001073856.1| serine/arginine-rich splicing factor 10 isoform 2 [Mus musculus]
gi|332807987|ref|XP_003307925.1| PREDICTED: uncharacterized protein LOC456627 [Pan troglodytes]
gi|344287388|ref|XP_003415435.1| PREDICTED: serine/arginine-rich splicing factor 10-like isoform 1
[Loxodonta africana]
gi|397140010|ref|XP_003846472.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Homo
sapiens]
gi|397478979|ref|XP_003810811.1| PREDICTED: serine/arginine-rich splicing factor 10 [Pan paniscus]
gi|403287348|ref|XP_003934911.1| PREDICTED: serine/arginine-rich splicing factor 10 [Saimiri
boliviensis boliviensis]
gi|403287350|ref|XP_003934912.1| PREDICTED: serine/arginine-rich splicing factor 10 [Saimiri
boliviensis boliviensis]
gi|441676930|ref|XP_004092715.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Nomascus
leucogenys]
gi|47605579|sp|O75494.1|SRS10_HUMAN RecName: Full=Serine/arginine-rich splicing factor 10; AltName:
Full=40 kDa SR-repressor protein; Short=SRrp40; AltName:
Full=FUS-interacting serine-arginine-rich protein 1;
AltName: Full=Splicing factor SRp38; AltName:
Full=Splicing factor, arginine/serine-rich 13A; AltName:
Full=TLS-associated protein with Ser-Arg repeats;
Short=TASR; Short=TLS-associated protein with SR
repeats; AltName: Full=TLS-associated serine-arginine
protein; Short=TLS-associated SR protein
gi|47605750|sp|Q9R0U0.2|SRS10_MOUSE RecName: Full=Serine/arginine-rich splicing factor 10; AltName:
Full=FUS-interacting serine-arginine-rich protein 1;
AltName: Full=Neural-salient serine/arginine-rich
protein; AltName: Full=Neural-specific SR protein;
AltName: Full=Splicing factor, arginine/serine-rich 13A;
AltName: Full=TLS-associated protein with Ser-Arg
repeats; Short=TASR; Short=TLS-associated protein with
SR repeats; AltName: Full=TLS-associated serine-arginine
protein; Short=TLS-associated SR protein
gi|18034489|gb|AAL57514.1|AF449427_1 SRrp40 [Homo sapiens]
gi|3327957|gb|AAC26715.1| TLS-associated protein TASR-2 [Mus musculus]
gi|3327976|gb|AAC26727.1| TLS-associated protein TASR-2 [Homo sapiens]
gi|12852132|dbj|BAB29286.1| unnamed protein product [Mus musculus]
gi|13477159|gb|AAH05039.1| FUS interacting protein (serine/arginine-rich) 1 [Homo sapiens]
gi|15787483|gb|AAL06099.1| TLS-associated SR protein 2 [Homo sapiens]
gi|25006522|gb|AAN65380.1| splicing factor SRp38 [Homo sapiens]
gi|29144881|gb|AAH43060.1| FUS interacting protein (serine-arginine rich) 1 [Mus musculus]
gi|52789308|gb|AAH83082.1| FUS interacting protein (serine-arginine rich) 1 [Mus musculus]
gi|74214326|dbj|BAE40403.1| unnamed protein product [Mus musculus]
gi|74214388|dbj|BAE40431.1| unnamed protein product [Mus musculus]
gi|410223010|gb|JAA08724.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410261892|gb|JAA18912.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410261896|gb|JAA18914.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410261898|gb|JAA18915.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410302464|gb|JAA29832.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410302466|gb|JAA29833.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410302468|gb|JAA29834.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410330569|gb|JAA34231.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410330573|gb|JAA34233.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|417398022|gb|JAA46044.1| Putative serine/arginine-rich splicing factor 10 [Desmodus
rotundus]
Length = 262
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 65/105 (61%), Gaps = 6/105 (5%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRF 62
Y RPP SL V N+ T +DLRR F R G + D+Y+P D +TR RGFA+V+F
Sbjct: 4 YLRPP-----NTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQF 58
Query: 63 FDKRDAEDALDAMDGRMLDGRELRVQMARYGR-PPSSSRSRGGRD 106
D RDAEDAL +D + + GR++ +Q A+ R P+ +++ GR+
Sbjct: 59 EDVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEGRN 103
>gi|346986281|ref|NP_001231298.1| serine/arginine-rich splicing factor 10 isoform 1 [Sus scrofa]
gi|338784425|gb|AEI98875.1| serine/arginine-rich splicing factor 10 isoform 2 [Sus scrofa]
Length = 262
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 65/105 (61%), Gaps = 6/105 (5%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRF 62
Y RPP SL V N+ T +DLRR F R G + D+Y+P D +TR RGFA+V+F
Sbjct: 4 YLRPP-----NTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQF 58
Query: 63 FDKRDAEDALDAMDGRMLDGRELRVQMARYGR-PPSSSRSRGGRD 106
D RDAEDAL +D + + GR++ +Q A+ R P+ +++ GR+
Sbjct: 59 EDVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEGRN 103
>gi|9843661|emb|CAC03604.1| SC35-like splicing factor SCL30a, 30a kD [Arabidopsis thaliana]
Length = 261
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 57/95 (60%), Gaps = 3/95 (3%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
SL V NL + +DLRR FE+ G V DIY+PRD +T + RGF F++F D DA +A
Sbjct: 37 TSLLVRNLRHDCRQEDLRRPFEQFGPVKDIYLPRDYYTGDPRGFGFIQFMDPADAAEAKH 96
Query: 74 AMDGRMLDGRELRVQMARYGRPPSS---SRSRGGR 105
MDG +L GREL V A R + +R RGGR
Sbjct: 97 QMDGYLLLGRELTVVFAEENRKKPTEMRTRDRGGR 131
>gi|448878202|gb|AGE46064.1| arginine/serine-rich splicing factor SC30 transcript III [Zea mays]
Length = 293
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 58/81 (71%), Gaps = 2/81 (2%)
Query: 25 TTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAMDGRMLDGRE 84
TT DDL +FER G+V D++IPRDR T +SRGFAFVR+ +A+ A+D +DGR +DGR
Sbjct: 64 TTADDLFPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAIDRLDGRDVDGRN 123
Query: 85 LRVQMARYGRPPSSSRSRGGR 105
+ VQ A+YG P++ R GR
Sbjct: 124 IMVQFAKYG--PNAEPIRKGR 142
>gi|300360547|ref|NP_001177934.1| serine/arginine-rich splicing factor 10 isoform 3 [Homo sapiens]
gi|307133714|ref|NP_001182513.1| splicing factor, arginine/serine-rich 13A [Macaca mulatta]
gi|16265859|gb|AAL16666.1|AF419332_1 TLS-associated protein TASR-2 [Homo sapiens]
gi|193786066|dbj|BAG50956.1| unnamed protein product [Homo sapiens]
Length = 261
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 65/105 (61%), Gaps = 6/105 (5%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRF 62
Y RPP SL V N+ T +DLRR F R G + D+Y+P D +TR RGFA+V+F
Sbjct: 4 YLRPP-----NTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQF 58
Query: 63 FDKRDAEDALDAMDGRMLDGRELRVQMARYGR-PPSSSRSRGGRD 106
D RDAEDAL +D + + GR++ +Q A+ R P+ +++ GR+
Sbjct: 59 EDVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEGRN 103
>gi|359318927|ref|XP_003638945.1| PREDICTED: serine/arginine-rich splicing factor 10 [Canis lupus
familiaris]
Length = 262
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 65/105 (61%), Gaps = 6/105 (5%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRF 62
Y RPP SL V N+ T +DLRR F R G + D+Y+P D +TR RGFA+V+F
Sbjct: 4 YLRPP-----NTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQF 58
Query: 63 FDKRDAEDALDAMDGRMLDGRELRVQMARYGR-PPSSSRSRGGRD 106
D RDAEDAL +D + + GR++ +Q A+ R P+ +++ GR+
Sbjct: 59 EDVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEGRN 103
>gi|4001720|dbj|BAA35092.1| neural specific sr protein NSSR 1 [Mus musculus]
Length = 262
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 65/105 (61%), Gaps = 6/105 (5%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRF 62
Y RPP SL V N+ T +DLRR F R G + D+Y+P D +TR RGFA+V+F
Sbjct: 4 YLRPP-----NTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQF 58
Query: 63 FDKRDAEDALDAMDGRMLDGRELRVQMARYGR-PPSSSRSRGGRD 106
D RDAEDAL +D + + GR++ +Q A+ R P+ +++ GR+
Sbjct: 59 EDVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEGRN 103
>gi|62897549|dbj|BAD96714.1| FUS interacting protein (serine-arginine rich) 1 isoform 2 variant
[Homo sapiens]
Length = 262
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 65/105 (61%), Gaps = 6/105 (5%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRF 62
Y RPP SL V N+ T +DLRR F R G + D+Y+P D +TR RGFA+V+F
Sbjct: 4 YLRPP-----NTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQF 58
Query: 63 FDKRDAEDALDAMDGRMLDGRELRVQMARYGR-PPSSSRSRGGRD 106
D RDAEDAL +D + + GR++ +Q A+ R P+ +++ GR+
Sbjct: 59 EDVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQIKAKEGRN 103
>gi|296207043|ref|XP_002750472.1| PREDICTED: serine/arginine-rich splicing factor 10 isoform 2
[Callithrix jacchus]
Length = 262
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 65/105 (61%), Gaps = 6/105 (5%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRF 62
Y RPP SL V N+ T +DLRR F R G + D+Y+P D +TR RGFA+V+F
Sbjct: 4 YLRPP-----NTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQF 58
Query: 63 FDKRDAEDALDAMDGRMLDGRELRVQMARYGR-PPSSSRSRGGRD 106
D RDAEDAL +D + + GR++ +Q A+ R P+ +++ GR+
Sbjct: 59 EDVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEGRN 103
>gi|218200082|gb|EEC82509.1| hypothetical protein OsI_26989 [Oryza sativa Indica Group]
Length = 216
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/117 (47%), Positives = 70/117 (59%), Gaps = 7/117 (5%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
SL V NL P+DLRR F + G + DIYIPRD ++ E RGF FV+++D DA DA
Sbjct: 41 TSLLVRNLRRDCRPEDLRRPFGQFGRLKDIYIPRDYYSGEPRGFGFVQYYDPDDAADAKY 100
Query: 74 AMDGRMLDGRELRVQMARYGR-PPSSSRSRGGRDRDR-RRDRSRSRDRRYTRSRSFS 128
MDG+++ GRE+ V A R PS RS RDR R RS D+RY+RS +S
Sbjct: 101 YMDGQVILGREVAVVFAEENRKKPSEMRS-----RDRISGSRGRSYDQRYSRSPRYS 152
>gi|41055271|ref|NP_956827.1| splicing factor, arginine/serine-rich 13A [Danio rerio]
gi|33604116|gb|AAH56275.1| Zgc:65772 protein [Danio rerio]
gi|42542503|gb|AAH66442.1| Zgc:65772 [Danio rerio]
Length = 248
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 58/89 (65%), Gaps = 5/89 (5%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRF 62
Y RPP SL V N++ + P+DLRR F R G + D+YIP D ++R RGFA+++F
Sbjct: 4 YMRPP-----NSSLFVRNISDESRPEDLRREFGRYGPIVDVYIPLDFYSRRPRGFAYIQF 58
Query: 63 FDKRDAEDALDAMDGRMLDGRELRVQMAR 91
D RDAEDAL +D + + GR++ +Q A+
Sbjct: 59 EDVRDAEDALHNLDRKWVCGRQIEIQFAQ 87
>gi|156407025|ref|XP_001641345.1| predicted protein [Nematostella vectensis]
gi|156228483|gb|EDO49282.1| predicted protein [Nematostella vectensis]
Length = 95
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/90 (52%), Positives = 56/90 (62%), Gaps = 7/90 (7%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR- 61
Y RPP S+ V NL T PDDLRR+F + G + D+YIP D +TRE RGF ++
Sbjct: 4 YSRPPNS-----SIYVRNLHPDTRPDDLRRMFGKYGRITDVYIPLDYYTREPRGFCYIYI 58
Query: 62 -FFDKRDAEDALDAMDGRMLDGRELRVQMA 90
F D RDAEDAL +D ML GREL VQ A
Sbjct: 59 TFEDIRDAEDALYYLDRAMLLGRELEVQFA 88
>gi|240254272|ref|NP_564685.4| SC35-like splicing factor 33 [Arabidopsis thaliana]
gi|75337149|sp|Q9SEU4.1|SR33_ARATH RecName: Full=Serine/arginine-rich splicing factor 33; AltName:
Full=SC35-like splicing factor 33; Short=At-SCL33;
Short=AtSCL33
gi|6572475|gb|AAF17288.1|AF099940_1 Serine/arginine-rich protein [Arabidopsis thaliana]
gi|9843659|emb|CAC03603.1| SC35-like splicing factor SCL33, 33 kD [Arabidopsis thaliana]
gi|56744214|gb|AAW28547.1| At1g55310 [Arabidopsis thaliana]
gi|332195101|gb|AEE33222.1| SC35-like splicing factor 33 [Arabidopsis thaliana]
Length = 287
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 49/77 (63%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
SL V NL + +DLR+ FE+ G V DIY+PRD +T + RGF FV+F D DA DA
Sbjct: 36 TSLLVRNLRHDCRQEDLRKSFEQFGPVKDIYLPRDYYTGDPRGFGFVQFMDPADAADAKH 95
Query: 74 AMDGRMLDGRELRVQMA 90
MDG +L GREL V A
Sbjct: 96 HMDGYLLLGRELTVVFA 112
>gi|395854840|ref|XP_003799887.1| PREDICTED: serine/arginine-rich splicing factor 10 [Otolemur
garnettii]
Length = 221
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 65/105 (61%), Gaps = 6/105 (5%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRF 62
Y RPP SL V N+ T +DLRR F R G + D+Y+P D +TR RGFA+V+F
Sbjct: 4 YLRPP-----NTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQF 58
Query: 63 FDKRDAEDALDAMDGRMLDGRELRVQMARYGR-PPSSSRSRGGRD 106
D RDAEDAL +D + + GR++ +Q A+ R P+ +++ GR+
Sbjct: 59 EDVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEGRN 103
>gi|74141008|dbj|BAE22085.1| unnamed protein product [Mus musculus]
Length = 278
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 65/105 (61%), Gaps = 6/105 (5%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRF 62
Y RPP SL V N+ T +DLRR F R G + D+Y+P D +TR RGFA+V+F
Sbjct: 4 YLRPP-----NTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQF 58
Query: 63 FDKRDAEDALDAMDGRMLDGRELRVQMARYGR-PPSSSRSRGGRD 106
D RDAEDAL +D + + GR++ +Q A+ R P+ +++ GR+
Sbjct: 59 EDVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEGRN 103
>gi|225435731|ref|XP_002285703.1| PREDICTED: uncharacterized protein LOC100263951 [Vitis vinifera]
Length = 245
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/137 (44%), Positives = 73/137 (53%), Gaps = 14/137 (10%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
SL V NL + +DLRR F + G + DIY+PRD +T E RGF FV++ D DA +A
Sbjct: 38 TSLLVRNLRHDCRGEDLRRPFGQFGPLKDIYLPRDYYTGEPRGFGFVQYVDPADAAEAKY 97
Query: 74 AMDGRMLDGRELRVQMARYGR-PPSSSRSRGGRDRDRRRDRSRSRDRRYTRSRSFSSRSR 132
MDG++L GREL V A R PS R+ R R R R Y R RS SR
Sbjct: 98 QMDGQILHGRELTVVFAEENRKKPSDMRA-----------RERGRGRFYDRRRSPLRYSR 146
Query: 133 SGSKSPRKARSKSIDRD 149
S PR ARS S RD
Sbjct: 147 --SPPPRHARSPSRGRD 161
>gi|15293081|gb|AAK93651.1| unknown protein [Arabidopsis thaliana]
Length = 263
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 49/77 (63%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
SL V NL + +DLR+ FE+ G V DIY+PRD +T + RGF FV+F D DA DA
Sbjct: 36 TSLLVRNLRHDCRQEDLRKSFEQFGPVKDIYLPRDYYTGDPRGFGFVQFMDPADAADAKH 95
Query: 74 AMDGRMLDGRELRVQMA 90
MDG +L GREL V A
Sbjct: 96 HMDGYLLLGRELTVVFA 112
>gi|296476640|tpg|DAA18755.1| TPA: FUS interacting protein (serine-arginine rich) 1-like [Bos
taurus]
Length = 262
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 65/105 (61%), Gaps = 6/105 (5%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRF 62
Y RPP SL V N+ T +DLRR F R G + D+Y+P D +TR RGFA+V+F
Sbjct: 4 YLRPP-----NTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQF 58
Query: 63 FDKRDAEDALDAMDGRMLDGRELRVQMARYGR-PPSSSRSRGGRD 106
D RDAEDAL +D + + GR++ +Q A+ R P+ +++ GR+
Sbjct: 59 EDVRDAEDALHNLDRKCICGRQIEIQFAQGDRKTPNQMKAKEGRN 103
>gi|108708411|gb|ABF96206.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
Length = 218
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/90 (50%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
SL V NL PDDLRR F + G V DIY+PRD +T E RGF F++++D DA DA
Sbjct: 37 TSLLVRNLRRDCRPDDLRRPFGKFGRVKDIYLPRDYYTGEPRGFGFIQYYDPEDAADAKY 96
Query: 74 AMDGRMLDGRELRVQMARYGR-PPSSSRSR 102
MDG++L GRE+ V A R PS R+R
Sbjct: 97 HMDGQILLGREVTVVFAEENRKKPSEMRAR 126
>gi|402593936|gb|EJW87863.1| hypothetical protein WUBG_01225 [Wuchereria bancrofti]
Length = 103
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/85 (48%), Positives = 56/85 (65%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
+L V + Y PDDLR +FE+ G V D+YIP D +TRESRGFA+V+F RDAEDAL
Sbjct: 15 TLYVRQVHYSARPDDLRALFEQMGPVRDVYIPLDYYTRESRGFAYVKFEFTRDAEDALRE 74
Query: 75 MDGRMLDGRELRVQMARYGRPPSSS 99
++G + GR + V+ A R ++S
Sbjct: 75 LNGTSILGRRIEVEWAEGQRKSTAS 99
>gi|222637522|gb|EEE67654.1| hypothetical protein OsJ_25252 [Oryza sativa Japonica Group]
Length = 388
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/117 (47%), Positives = 70/117 (59%), Gaps = 7/117 (5%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
SL V NL P+DLRR F + G + DIYIPRD ++ E RGF FV+++D DA DA
Sbjct: 213 TSLLVRNLRRDCRPEDLRRPFGQFGRLKDIYIPRDYYSGEPRGFGFVQYYDPDDAADAKY 272
Query: 74 AMDGRMLDGRELRVQMARYGR-PPSSSRSRGGRDRDRRR-DRSRSRDRRYTRSRSFS 128
MDG+++ GRE+ V A R PS RS RDR R RS D+RY+RS +S
Sbjct: 273 YMDGQVILGREVAVVFAEENRKKPSEMRS-----RDRISGSRGRSYDQRYSRSPRYS 324
>gi|221057297|ref|XP_002259786.1| Arg-rich splicing factor [Plasmodium knowlesi strain H]
gi|193809858|emb|CAQ40562.1| Arg-rich splicing factor, putative [Plasmodium knowlesi strain H]
Length = 327
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 53/81 (65%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
+SL + L Y T+P +R F+R G + D+Y+P D +T+E RGF FV F+D +DAE AL
Sbjct: 12 MSLLIRKLKYDTSPSMVREKFKRFGAIKDVYLPIDYYTKEPRGFGFVEFYDPKDAEVALK 71
Query: 74 AMDGRMLDGRELRVQMARYGR 94
M+G +DG + V +A+ GR
Sbjct: 72 EMNGAEIDGNRVEVFVAQKGR 92
>gi|389583810|dbj|GAB66544.1| RNA binding protein [Plasmodium cynomolgi strain B]
Length = 1084
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 80/130 (61%), Gaps = 14/130 (10%)
Query: 10 IEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAE 69
+E SL + NL++ T+P+ +R++F+ G++ D+Y+P D +TR RGF FV +++ A+
Sbjct: 2 VENGCSLLIKNLSFHTSPEKIRKIFQSFGKIRDVYLPLDHYTRRPRGFGFVEYYEPEYAK 61
Query: 70 DALDAMDGRMLDGRELRVQMARYGR-PPSSSR-----SRGGRDRDRRRDRSRSRD----- 118
+A+ ++ +DG+E+++ +A+ R P + + +RGGR R R RS SRD
Sbjct: 62 EAMSILNHSKIDGKEIKIIIAQNRRKSPETMKIYQQNARGGRYR-RHPYRSDSRDRSSEL 120
Query: 119 --RRYTRSRS 126
R+Y RS+S
Sbjct: 121 ERRKYDRSKS 130
>gi|124505987|ref|XP_001351591.1| Ser/Arg-rich splicing factor, putative [Plasmodium falciparum
3D7]
gi|23504518|emb|CAD51398.1| Ser/Arg-rich splicing factor, putative [Plasmodium falciparum
3D7]
Length = 308
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 53/81 (65%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
+SL + L + T+P +R F+R G + D+Y+P D +T+E RGF FV F+D +DAE AL
Sbjct: 12 MSLLIRKLKFDTSPSIVREKFKRFGAIKDVYLPIDYYTKEPRGFGFVEFYDAKDAEQALK 71
Query: 74 AMDGRMLDGRELRVQMARYGR 94
M+G +DG + V +A+ GR
Sbjct: 72 EMNGSEIDGSRIEVFVAQKGR 92
>gi|31249706|gb|AAP46199.1| putative splicing factor [Oryza sativa Japonica Group]
gi|108708412|gb|ABF96207.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|218192921|gb|EEC75348.1| hypothetical protein OsI_11773 [Oryza sativa Indica Group]
gi|222625002|gb|EEE59134.1| hypothetical protein OsJ_11026 [Oryza sativa Japonica Group]
Length = 217
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/90 (50%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
SL V NL PDDLRR F + G V DIY+PRD +T E RGF F++++D DA DA
Sbjct: 37 TSLLVRNLRRDCRPDDLRRPFGKFGRVKDIYLPRDYYTGEPRGFGFIQYYDPEDAADAKY 96
Query: 74 AMDGRMLDGRELRVQMARYGR-PPSSSRSR 102
MDG++L GRE+ V A R PS R+R
Sbjct: 97 HMDGQILLGREVTVVFAEENRKKPSEMRAR 126
>gi|255644989|gb|ACU22994.1| unknown [Glycine max]
Length = 214
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 83/169 (49%), Gaps = 44/169 (26%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
SL V NL + P+DLRR F + G + DIY+P+D +T E RGF FV++ D DA DA
Sbjct: 41 TSLLVRNLRHDCRPEDLRRPFGQFGPLKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKY 100
Query: 74 AMDGRMLDGRELRVQMARYGR-PPSSSRSRGGRDRD------------------------ 108
MDG++L GREL V A R P+ R+R R R
Sbjct: 101 HMDGQVLLGRELTVVFAEENRKKPTEMRTRERRGRFYDRRRSPPRYSRSPRYSRSPPPRH 160
Query: 109 --------------RRRDRSRS---RDRRYTRSRSFS--SRSRSGSKSP 138
+RR+ SRS DRRY+R RSFS SR RS S+SP
Sbjct: 161 RSRSRSRDYYSPPAKRREYSRSVSPEDRRYSRERSFSQHSRERSYSRSP 209
>gi|410170856|ref|XP_003960061.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Homo
sapiens]
gi|426328339|ref|XP_004024960.1| PREDICTED: serine/arginine-rich splicing factor 10 [Gorilla gorilla
gorilla]
Length = 217
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 65/105 (61%), Gaps = 6/105 (5%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRF 62
Y RPP SL V N+ T +DLRR F R G + D+Y+P D +TR RGFA+V+F
Sbjct: 4 YLRPP-----NTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQF 58
Query: 63 FDKRDAEDALDAMDGRMLDGRELRVQMARYGR-PPSSSRSRGGRD 106
D RDAEDAL +D + + GR++ +Q A+ R P+ +++ GR+
Sbjct: 59 EDVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEGRN 103
>gi|323448916|gb|EGB04809.1| hypothetical protein AURANDRAFT_17068, partial [Aureococcus
anophagefferens]
Length = 112
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 54/77 (70%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
VS+ V NLT++ + +DLR FE+ G V D+YIP D TRE RGFAF+ K +A++A+
Sbjct: 13 VSVLVRNLTFKLSKEDLREEFEKFGSVKDVYIPLDYMTREPRGFAFIEMSCKAEADEAIA 72
Query: 74 AMDGRMLDGRELRVQMA 90
+DG+ LDGR ++V +A
Sbjct: 73 GLDGKDLDGRVIKVLLA 89
>gi|240254274|ref|NP_001031195.4| SC35-like splicing factor 33 [Arabidopsis thaliana]
gi|332195102|gb|AEE33223.1| SC35-like splicing factor 33 [Arabidopsis thaliana]
Length = 220
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 49/77 (63%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
SL V NL + +DLR+ FE+ G V DIY+PRD +T + RGF FV+F D DA DA
Sbjct: 36 TSLLVRNLRHDCRQEDLRKSFEQFGPVKDIYLPRDYYTGDPRGFGFVQFMDPADAADAKH 95
Query: 74 AMDGRMLDGRELRVQMA 90
MDG +L GREL V A
Sbjct: 96 HMDGYLLLGRELTVVFA 112
>gi|221488187|gb|EEE26401.1| hypothetical protein TGGT1_109290 [Toxoplasma gondii GT1]
gi|221508700|gb|EEE34269.1| conserved hypothetical protein [Toxoplasma gondii VEG]
Length = 208
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 54/78 (69%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
SL + NL + T+PD +R++FE+ G V D+Y+P D FT+ RGF FV F+++ A++A+
Sbjct: 5 CSLLIRNLCFETSPDRVRQIFEKFGRVRDVYLPLDHFTKRPRGFGFVEFYEESTAQEAMR 64
Query: 74 AMDGRMLDGRELRVQMAR 91
MD M+DG E+ V +A+
Sbjct: 65 EMDRTMIDGNEVHVIIAQ 82
>gi|237832865|ref|XP_002365730.1| RNA binding motif-containing protein [Toxoplasma gondii ME49]
gi|211963394|gb|EEA98589.1| RNA binding motif-containing protein [Toxoplasma gondii ME49]
Length = 208
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 54/78 (69%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
SL + NL + T+PD +R++FE+ G V D+Y+P D FT+ RGF FV F+++ A++A+
Sbjct: 5 CSLLIRNLCFETSPDRVRQIFEKFGRVRDVYLPLDHFTKRPRGFGFVEFYEESTAQEAMR 64
Query: 74 AMDGRMLDGRELRVQMAR 91
MD M+DG E+ V +A+
Sbjct: 65 EMDRTMIDGNEVHVIIAQ 82
>gi|448878411|gb|AGE46168.1| arginine/serine-rich splicing factor SC39 transcript II
[Physcomitrella patens subsp. patens]
Length = 167
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 60/84 (71%), Gaps = 1/84 (1%)
Query: 3 YGRP-PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
+GR PP I SL V N+T+RT+ DDL +F+R G+V DI+IPRDR T ESRGFAFVR
Sbjct: 4 FGRAGPPDIRDTYSLLVLNITFRTSADDLYPLFDRYGKVVDIFIPRDRRTGESRGFAFVR 63
Query: 62 FFDKRDAEDALDAMDGRMLDGREL 85
+ +A+ A++ +DGR +DGR +
Sbjct: 64 YKYSDEAQKAIERLDGRAVDGRNI 87
>gi|70928216|ref|XP_736352.1| Ser/Arg-rich splicing factor [Plasmodium chabaudi chabaudi]
gi|56510813|emb|CAH84192.1| Ser/Arg-rich splicing factor, putative [Plasmodium chabaudi
chabaudi]
Length = 129
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 54/81 (66%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
+SL + L + T+P +R F++ G + D+Y+P D +T+E RGF FV F+D +DAE+AL
Sbjct: 12 MSLLIRKLKFNTSPSMVREKFKKFGAIKDVYLPIDYYTKEPRGFGFVEFYDPKDAEEALK 71
Query: 74 AMDGRMLDGRELRVQMARYGR 94
M+G +DG + V +A+ GR
Sbjct: 72 EMNGSEIDGNRIEVFVAQKGR 92
>gi|89272025|emb|CAJ83230.1| FUS interacting protein (serine/arginine-rich) 1 [Xenopus
(Silurana) tropicalis]
Length = 257
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 63/104 (60%), Gaps = 6/104 (5%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRF 62
Y RPP SL V N+ +DLRR F R G + D+Y+P D +TR RGFA+V+F
Sbjct: 4 YLRPP-----NTSLFVRNIADDIRSEDLRREFGRYGPIVDVYVPLDYYTRRPRGFAYVQF 58
Query: 63 FDKRDAEDALDAMDGRMLDGRELRVQMARYGR-PPSSSRSRGGR 105
D RDAEDAL +D + + GR++ +Q A+ R P+ +++ GR
Sbjct: 59 EDVRDAEDALHNLDKKWICGRQIEIQFAQGDRKTPNQMKAKEGR 102
>gi|197097312|ref|NP_001125358.1| splicing factor, arginine/serine-rich 13A [Pongo abelii]
gi|55727814|emb|CAH90660.1| hypothetical protein [Pongo abelii]
Length = 262
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 64/105 (60%), Gaps = 6/105 (5%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRF 62
Y RPP SL V N+ T +DLRR F R G + D+Y+P D +TR RGFA+V+F
Sbjct: 4 YLRPP-----NTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQF 58
Query: 63 FDKRDAEDALDAMDGRMLDGRELRVQMARYGR-PPSSSRSRGGRD 106
D RDAEDAL +D + + GR++ +Q A+ R P+ + + GR+
Sbjct: 59 EDVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKVKEGRN 103
>gi|12323160|gb|AAG51556.1|AC027034_2 unknown protein; 47745-45927 [Arabidopsis thaliana]
Length = 220
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 49/77 (63%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
SL V NL + +DLR+ FE+ G V DIY+PRD +T + RGF FV+F D DA DA
Sbjct: 36 TSLLVRNLRHDCRQEDLRKSFEQFGPVKDIYLPRDYYTGDPRGFGFVQFMDPADAADAKH 95
Query: 74 AMDGRMLDGRELRVQMA 90
MDG +L GREL V A
Sbjct: 96 HMDGYLLLGRELTVVFA 112
>gi|74179690|dbj|BAE22485.1| unnamed protein product [Mus musculus]
Length = 262
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 65/105 (61%), Gaps = 6/105 (5%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRF 62
Y RPP SL V N+ T +DLRR F R G + D+Y+P D +TR RGFA+V+F
Sbjct: 4 YLRPP-----NTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQF 58
Query: 63 FDKRDAEDALDAMDGRMLDGRELRVQMARYG-RPPSSSRSRGGRD 106
D RDAEDAL +D + + GR++ +Q A+ + P+ +++ GR+
Sbjct: 59 EDVRDAEDALHNLDRKWICGRQIEIQFAQGDLKTPNQMKAKEGRN 103
>gi|156098735|ref|XP_001615383.1| hypothetical protein [Plasmodium vivax Sal-1]
gi|148804257|gb|EDL45656.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 1057
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 57/82 (69%)
Query: 10 IEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAE 69
+E SL + NL++ T+P+ +R++F+ G + D+Y+P D +TR RGF FV +++ + A+
Sbjct: 2 VENGCSLLIKNLSFHTSPEKIRKIFQSFGRIRDVYLPLDHYTRRPRGFGFVEYYEPQYAK 61
Query: 70 DALDAMDGRMLDGRELRVQMAR 91
+AL ++ +DG+E+++ +A+
Sbjct: 62 EALTILNHSKIDGKEIKIIIAQ 83
>gi|58331865|ref|NP_001011096.1| serine/arginine-rich splicing factor 10 [Xenopus (Silurana)
tropicalis]
gi|54038246|gb|AAH84490.1| FUS interacting protein (serine/arginine-rich) 1 [Xenopus
(Silurana) tropicalis]
Length = 258
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 63/104 (60%), Gaps = 6/104 (5%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRF 62
Y RPP SL V N+ +DLRR F R G + D+Y+P D +TR RGFA+V+F
Sbjct: 4 YLRPP-----NTSLFVRNIADDIRSEDLRREFGRYGPIVDVYVPLDYYTRRPRGFAYVQF 58
Query: 63 FDKRDAEDALDAMDGRMLDGRELRVQMARYGR-PPSSSRSRGGR 105
D RDAEDAL +D + + GR++ +Q A+ R P+ +++ GR
Sbjct: 59 EDVRDAEDALHNLDKKWICGRQIEIQFAQGDRKTPNQMKAKEGR 102
>gi|18203864|gb|AAH21715.1| Serine-arginine repressor protein (35 kDa) [Homo sapiens]
gi|123982510|gb|ABM82996.1| serine-arginine repressor protein (35 kDa) [synthetic construct]
gi|123997175|gb|ABM86189.1| serine-arginine repressor protein (35 kDa) [synthetic construct]
Length = 261
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 56/89 (62%), Gaps = 5/89 (5%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRF 62
Y RPP SL + N+ T P+DLRR F R G + D+YIP D +TR RGFA+V+F
Sbjct: 4 YTRPP-----NTSLFIRNVADATRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQF 58
Query: 63 FDKRDAEDALDAMDGRMLDGRELRVQMAR 91
D R AEDAL ++ + + GR++ +Q A+
Sbjct: 59 EDVRGAEDALYNLNRKWVCGRQIEIQFAQ 87
>gi|298708752|emb|CBJ30714.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 270
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 54/80 (67%)
Query: 12 GMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDA 71
G VSL V NLT+RT DD++R+F G+V D+Y+P D T++ RGFAFV F+D DA A
Sbjct: 31 GKVSLLVRNLTFRTRVDDVKRIFTDFGDVRDVYLPLDFGTQKPRGFAFVEFYDPGDAAHA 90
Query: 72 LDAMDGRMLDGRELRVQMAR 91
D +DG LDGR + V A+
Sbjct: 91 RDRLDGYNLDGRNISVLYAQ 110
>gi|302844725|ref|XP_002953902.1| hypothetical protein VOLCADRAFT_121229 [Volvox carteri f.
nagariensis]
gi|300260714|gb|EFJ44931.1| hypothetical protein VOLCADRAFT_121229 [Volvox carteri f.
nagariensis]
Length = 294
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 52/81 (64%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
SL NL+ TT DDLR ER G + DIY+P+D +T + RG FV F D +DAE+A
Sbjct: 29 TSLLFRNLSKTTTADDLRHTTERFGPIRDIYLPKDFYTGDPRGLGFVEFSDPKDAEEARH 88
Query: 74 AMDGRMLDGRELRVQMARYGR 94
++DG L GR + VQ A++GR
Sbjct: 89 SLDGSTLAGRVISVQFAQHGR 109
>gi|294933970|ref|XP_002780926.1| serine/arginine rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
gi|239891073|gb|EER12721.1| serine/arginine rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
Length = 235
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 53/81 (65%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
SL V NL Y T+P +R +F R GE+ D+Y+P D + RGF FV F D RD +A +
Sbjct: 68 CSLIVRNLNYDTSPQHVRSLFSRYGEIRDVYLPLDYNSGRPRGFGFVEFCDPRDVVEAKN 127
Query: 74 AMDGRMLDGRELRVQMARYGR 94
AMDG+++DG ++V +A+ GR
Sbjct: 128 AMDGKVVDGNAIQVDIAQRGR 148
>gi|159471227|ref|XP_001693758.1| predicted protein [Chlamydomonas reinhardtii]
gi|158283261|gb|EDP09012.1| predicted protein [Chlamydomonas reinhardtii]
Length = 86
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 56/80 (70%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
S+ V N+ T DDLR+ FE+ GE+ D+YIPRD +T+ SRGF F+ F D RDA++A+
Sbjct: 1 SVLVRNIPLHMTVDDLRKKFEKFGELRDVYIPRDYYTQRSRGFGFIEFRDARDADEAIYQ 60
Query: 75 MDGRMLDGRELRVQMARYGR 94
+D +DGRE+ V +++ GR
Sbjct: 61 LDKTSIDGREINVCLSKEGR 80
>gi|359487440|ref|XP_002267230.2| PREDICTED: uncharacterized protein LOC100259677 [Vitis vinifera]
Length = 225
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 50/77 (64%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
SL V NL + P+DLRR F + G + DIY+PRD +T E RGF FV++ D DA +A
Sbjct: 36 TSLLVRNLRHDCRPEDLRRPFGQFGPLKDIYLPRDYYTGEPRGFGFVQYVDPADAAEAKY 95
Query: 74 AMDGRMLDGRELRVQMA 90
MDG++L GREL V A
Sbjct: 96 QMDGQVLLGRELTVVFA 112
>gi|242072089|ref|XP_002451321.1| hypothetical protein SORBIDRAFT_05g027700 [Sorghum bicolor]
gi|241937164|gb|EES10309.1| hypothetical protein SORBIDRAFT_05g027700 [Sorghum bicolor]
Length = 270
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 49/80 (61%)
Query: 11 EGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAED 70
G VSL V N+ R P++LR FER G V D+Y+PRD T E RGF FV F D DA +
Sbjct: 37 HGSVSLLVRNIPLRCRPEELRVPFERFGPVRDVYLPRDYHTGEPRGFGFVEFVDAYDASE 96
Query: 71 ALDAMDGRMLDGRELRVQMA 90
A M+ +M GRE+ V +A
Sbjct: 97 AQYHMNRQMFAGREITVVLA 116
>gi|297722159|ref|NP_001173443.1| Os03g0374575 [Oryza sativa Japonica Group]
gi|255674538|dbj|BAH92171.1| Os03g0374575 [Oryza sativa Japonica Group]
Length = 251
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 45/90 (50%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
SL V NL PDDLRR F + G V DIY+PRD +T E RGF F++++D DA DA
Sbjct: 44 TSLLVRNLRRDCRPDDLRRPFGKFGRVKDIYLPRDYYTGEPRGFGFIQYYDPEDAADAKY 103
Query: 74 AMDGRMLDGRELRVQMARYGR-PPSSSRSR 102
MDG++L GRE+ V A R PS R+R
Sbjct: 104 HMDGQILLGREVTVVFAEENRKKPSEMRAR 133
>gi|448878332|gb|AGE46129.1| arginine/serine-rich splicing factor SCL31 [Sorghum bicolor]
Length = 270
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 49/80 (61%)
Query: 11 EGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAED 70
G VSL V N+ R P++LR FER G V D+Y+PRD T E RGF FV F D DA +
Sbjct: 37 HGSVSLLVRNIPLRCRPEELRVPFERFGPVRDVYLPRDYHTGEPRGFGFVEFVDAYDASE 96
Query: 71 ALDAMDGRMLDGRELRVQMA 90
A M+ +M GRE+ V +A
Sbjct: 97 AQYHMNRQMFAGREITVVLA 116
>gi|300360545|ref|NP_001177935.1| serine/arginine-rich splicing factor 10 isoform 4 [Homo sapiens]
gi|332266731|ref|XP_003282351.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Nomascus
leucogenys]
gi|397140012|ref|XP_003846473.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Homo
sapiens]
gi|426328341|ref|XP_004024961.1| PREDICTED: serine/arginine-rich splicing factor 10 [Gorilla gorilla
gorilla]
gi|14603220|gb|AAH10074.1| FUSIP1 protein [Homo sapiens]
Length = 173
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 65/105 (61%), Gaps = 6/105 (5%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRF 62
Y RPP SL V N+ T +DLRR F R G + D+Y+P D +TR RGFA+V+F
Sbjct: 4 YLRPP-----NTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQF 58
Query: 63 FDKRDAEDALDAMDGRMLDGRELRVQMARYGR-PPSSSRSRGGRD 106
D RDAEDAL +D + + GR++ +Q A+ R P+ +++ GR+
Sbjct: 59 EDVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEGRN 103
>gi|357462657|ref|XP_003601610.1| Arginine/serine-rich splicing factor [Medicago truncatula]
gi|355490658|gb|AES71861.1| Arginine/serine-rich splicing factor [Medicago truncatula]
gi|388503978|gb|AFK40055.1| unknown [Medicago truncatula]
Length = 248
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 50/81 (61%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
SL V NL + P+DLRR F G + DIY+P+D +T + RGF F++F D DA DA
Sbjct: 41 TSLLVRNLRHDCRPEDLRRPFGHFGPLKDIYLPKDYYTGQPRGFGFIQFVDPADAADAKY 100
Query: 74 AMDGRMLDGRELRVQMARYGR 94
MDG++L GRE+ V A R
Sbjct: 101 HMDGQVLLGREITVVFAEENR 121
>gi|194700364|gb|ACF84266.1| unknown [Zea mays]
Length = 267
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 49/80 (61%)
Query: 11 EGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAED 70
G VSL V N+ R P++LR FER G V D+Y+PRD T E RGF FV F D DA +
Sbjct: 35 HGSVSLLVRNIPLRCRPEELRVPFERFGPVRDVYLPRDYHTGEPRGFGFVEFVDAYDASE 94
Query: 71 ALDAMDGRMLDGRELRVQMA 90
A M+ +M GRE+ V +A
Sbjct: 95 AQYHMNRQMFAGREITVVLA 114
>gi|194706612|gb|ACF87390.1| unknown [Zea mays]
Length = 269
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 49/80 (61%)
Query: 11 EGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAED 70
G VSL V N+ R P++LR FER G V D+Y+PRD T E RGF FV F D DA +
Sbjct: 35 HGSVSLLVRNIPLRCRPEELRVPFERFGPVRDVYLPRDYHTGEPRGFGFVEFVDAYDASE 94
Query: 71 ALDAMDGRMLDGRELRVQMA 90
A M+ +M GRE+ V +A
Sbjct: 95 AQYHMNRQMFAGREITVVLA 114
>gi|344287390|ref|XP_003415436.1| PREDICTED: serine/arginine-rich splicing factor 10-like isoform 2
[Loxodonta africana]
Length = 173
Score = 78.6 bits (192), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 65/105 (61%), Gaps = 6/105 (5%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRF 62
Y RPP SL V N+ T +DLRR F R G + D+Y+P D +TR RGFA+V+F
Sbjct: 4 YLRPP-----NTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQF 58
Query: 63 FDKRDAEDALDAMDGRMLDGRELRVQMARYGR-PPSSSRSRGGRD 106
D RDAEDAL +D + + GR++ +Q A+ R P+ +++ GR+
Sbjct: 59 EDVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEGRN 103
>gi|359318925|ref|XP_003638944.1| PREDICTED: serine/arginine-rich splicing factor 10 [Canis lupus
familiaris]
Length = 173
Score = 78.6 bits (192), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 65/105 (61%), Gaps = 6/105 (5%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRF 62
Y RPP SL V N+ T +DLRR F R G + D+Y+P D +TR RGFA+V+F
Sbjct: 4 YLRPP-----NTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQF 58
Query: 63 FDKRDAEDALDAMDGRMLDGRELRVQMARYGR-PPSSSRSRGGRD 106
D RDAEDAL +D + + GR++ +Q A+ R P+ +++ GR+
Sbjct: 59 EDVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEGRN 103
>gi|403287344|ref|XP_003934909.1| PREDICTED: serine/arginine-rich splicing factor 10 [Saimiri
boliviensis boliviensis]
Length = 173
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 65/105 (61%), Gaps = 6/105 (5%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRF 62
Y RPP SL V N+ T +DLRR F R G + D+Y+P D +TR RGFA+V+F
Sbjct: 4 YLRPP-----NTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQF 58
Query: 63 FDKRDAEDALDAMDGRMLDGRELRVQMARYGR-PPSSSRSRGGRD 106
D RDAEDAL +D + + GR++ +Q A+ R P+ +++ GR+
Sbjct: 59 EDVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEGRN 103
>gi|5730079|ref|NP_006616.1| serine/arginine-rich splicing factor 10 isoform 1 [Homo sapiens]
gi|6753820|ref|NP_034308.1| serine/arginine-rich splicing factor 10 isoform 1 [Mus musculus]
gi|346986279|ref|NP_001231297.1| serine/arginine-rich splicing factor 10 isoform 2 [Sus scrofa]
gi|114554649|ref|XP_001166460.1| PREDICTED: uncharacterized protein LOC456627 isoform 3 [Pan
troglodytes]
gi|332266729|ref|XP_003282350.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Nomascus
leucogenys]
gi|344287394|ref|XP_003415438.1| PREDICTED: serine/arginine-rich splicing factor 10-like isoform 4
[Loxodonta africana]
gi|403287342|ref|XP_003934908.1| PREDICTED: serine/arginine-rich splicing factor 10 [Saimiri
boliviensis boliviensis]
gi|410032453|ref|XP_003949372.1| PREDICTED: uncharacterized protein LOC456627 [Pan troglodytes]
gi|426328337|ref|XP_004024959.1| PREDICTED: serine/arginine-rich splicing factor 10 [Gorilla gorilla
gorilla]
gi|441676940|ref|XP_004092716.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Nomascus
leucogenys]
gi|16265857|gb|AAL16665.1|AF419331_1 TLS-associated protein TASR-1 [Homo sapiens]
gi|2961107|gb|AAC70916.1| TLS-associated protein with SR repeats [Mus musculus]
gi|2961149|gb|AAC70918.1| TLS-associated protein TASR [Homo sapiens]
gi|7022446|dbj|BAA91601.1| unnamed protein product [Homo sapiens]
gi|12654547|gb|AAH01107.1| FUS interacting protein (serine/arginine-rich) 1 [Homo sapiens]
gi|15787482|gb|AAL06098.1| TLS-associated SR protein 1 [Homo sapiens]
gi|25006524|gb|AAN65381.1| splicing factor SRp38-2 [Homo sapiens]
gi|74178032|dbj|BAE29809.1| unnamed protein product [Mus musculus]
gi|74195900|dbj|BAE30509.1| unnamed protein product [Mus musculus]
gi|74214411|dbj|BAE40441.1| unnamed protein product [Mus musculus]
gi|261861046|dbj|BAI47045.1| splicing factor, arginine/serine-rich 13A [synthetic construct]
gi|312153330|gb|ADQ33177.1| FUS interacting protein (serine/arginine-rich) 1 [synthetic
construct]
gi|410223008|gb|JAA08723.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410261894|gb|JAA18913.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410302462|gb|JAA29831.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410330571|gb|JAA34232.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|417396659|gb|JAA45363.1| Putative serine/arginine-rich splicing factor [Desmodus rotundus]
Length = 183
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 65/105 (61%), Gaps = 6/105 (5%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRF 62
Y RPP SL V N+ T +DLRR F R G + D+Y+P D +TR RGFA+V+F
Sbjct: 4 YLRPP-----NTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQF 58
Query: 63 FDKRDAEDALDAMDGRMLDGRELRVQMARYGR-PPSSSRSRGGRD 106
D RDAEDAL +D + + GR++ +Q A+ R P+ +++ GR+
Sbjct: 59 EDVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEGRN 103
>gi|348570784|ref|XP_003471177.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Cavia
porcellus]
Length = 173
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 65/105 (61%), Gaps = 6/105 (5%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRF 62
Y RPP SL V N+ T +DLRR F R G + D+Y+P D +TR RGFA+V+F
Sbjct: 4 YLRPP-----NTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQF 58
Query: 63 FDKRDAEDALDAMDGRMLDGRELRVQMARYGR-PPSSSRSRGGRD 106
D RDAEDAL +D + + GR++ +Q A+ R P+ +++ GR+
Sbjct: 59 EDVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEGRN 103
>gi|332807982|ref|XP_513202.3| PREDICTED: uncharacterized protein LOC456627 isoform 5 [Pan
troglodytes]
Length = 176
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 65/105 (61%), Gaps = 6/105 (5%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRF 62
Y RPP SL V N+ T +DLRR F R G + D+Y+P D +TR RGFA+V+F
Sbjct: 4 YLRPP-----NTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQF 58
Query: 63 FDKRDAEDALDAMDGRMLDGRELRVQMARYGR-PPSSSRSRGGRD 106
D RDAEDAL +D + + GR++ +Q A+ R P+ +++ GR+
Sbjct: 59 EDVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEGRN 103
>gi|118151320|ref|NP_001071594.1| splicing factor, arginine/serine-rich 13A [Bos taurus]
gi|73586753|gb|AAI03101.1| FUS interacting protein (serine/arginine-rich) 1 [Bos taurus]
gi|296490040|tpg|DAA32153.1| TPA: FUS interacting protein (serine/arginine-rich) 1 [Bos taurus]
Length = 182
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 65/105 (61%), Gaps = 6/105 (5%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRF 62
Y RPP SL V N+ T +DLRR F R G + D+Y+P D +TR RGFA+V+F
Sbjct: 4 YLRPP-----NTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQF 58
Query: 63 FDKRDAEDALDAMDGRMLDGRELRVQMARYGR-PPSSSRSRGGRD 106
D RDAEDAL +D + + GR++ +Q A+ R P+ +++ GR+
Sbjct: 59 EDVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEGRN 103
>gi|74204113|dbj|BAE29044.1| unnamed protein product [Mus musculus]
gi|74211878|dbj|BAE29284.1| unnamed protein product [Mus musculus]
Length = 183
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 65/105 (61%), Gaps = 6/105 (5%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRF 62
Y RPP SL V N+ T +DLRR F R G + D+Y+P D +TR RGFA+V+F
Sbjct: 4 YLRPP-----NTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQF 58
Query: 63 FDKRDAEDALDAMDGRMLDGRELRVQMARYGR-PPSSSRSRGGRD 106
D RDAEDAL +D + + GR++ +Q A+ R P+ +++ GR+
Sbjct: 59 EDVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEGRN 103
>gi|300360549|ref|NP_001177936.1| serine/arginine-rich splicing factor 10 isoform 5 [Homo sapiens]
gi|291393216|ref|XP_002713069.1| PREDICTED: FUS interacting protein (serine-arginine rich) 1
[Oryctolagus cuniculus]
gi|410170859|ref|XP_003960062.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Homo
sapiens]
gi|74139434|dbj|BAE40858.1| unnamed protein product [Mus musculus]
Length = 182
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 65/105 (61%), Gaps = 6/105 (5%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRF 62
Y RPP SL V N+ T +DLRR F R G + D+Y+P D +TR RGFA+V+F
Sbjct: 4 YLRPP-----NTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQF 58
Query: 63 FDKRDAEDALDAMDGRMLDGRELRVQMARYGR-PPSSSRSRGGRD 106
D RDAEDAL +D + + GR++ +Q A+ R P+ +++ GR+
Sbjct: 59 EDVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEGRN 103
>gi|4001722|dbj|BAA35093.1| neural specific sr protein NSSR 2 [Mus musculus]
Length = 183
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 65/105 (61%), Gaps = 6/105 (5%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRF 62
Y RPP SL V N+ T +DLRR F R G + D+Y+P D +TR RGFA+V+F
Sbjct: 4 YLRPP-----NTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQF 58
Query: 63 FDKRDAEDALDAMDGRMLDGRELRVQMARYGR-PPSSSRSRGGRD 106
D RDAEDAL +D + + GR++ +Q A+ R P+ +++ GR+
Sbjct: 59 EDVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEGRN 103
>gi|301754964|ref|XP_002913325.1| PREDICTED: splicing factor, arginine/serine-rich 13A-like
[Ailuropoda melanoleuca]
gi|359318923|ref|XP_003638943.1| PREDICTED: serine/arginine-rich splicing factor 10 [Canis lupus
familiaris]
Length = 183
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 65/105 (61%), Gaps = 6/105 (5%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRF 62
Y RPP SL V N+ T +DLRR F R G + D+Y+P D +TR RGFA+V+F
Sbjct: 4 YLRPP-----NTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQF 58
Query: 63 FDKRDAEDALDAMDGRMLDGRELRVQMARYGR-PPSSSRSRGGRD 106
D RDAEDAL +D + + GR++ +Q A+ R P+ +++ GR+
Sbjct: 59 EDVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEGRN 103
>gi|213513443|ref|NP_001133450.1| FUS-interacting serine-arginine-rich protein 1 [Salmo salar]
gi|209154048|gb|ACI33256.1| FUS-interacting serine-arginine-rich protein 1 [Salmo salar]
Length = 271
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 58/89 (65%), Gaps = 5/89 (5%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRF 62
Y RPP SL + N++ + P+DLRR F R G V D+YIP D ++R RGFA+++F
Sbjct: 4 YLRPP-----NTSLFIRNISDESRPEDLRREFGRYGPVVDVYIPLDFYSRRPRGFAYIQF 58
Query: 63 FDKRDAEDALDAMDGRMLDGRELRVQMAR 91
D RDAEDAL +D + + GR++ +Q A+
Sbjct: 59 EDVRDAEDALHNLDRKWVCGRQIEIQFAQ 87
>gi|90079587|dbj|BAE89473.1| unnamed protein product [Macaca fascicularis]
Length = 219
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 65/105 (61%), Gaps = 6/105 (5%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRF 62
Y RPP SL V N+ T +DLRR F R G + D+Y+P D +TR RGFA+V+F
Sbjct: 4 YLRPP-----NTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQF 58
Query: 63 FDKRDAEDALDAMDGRMLDGRELRVQMARYGR-PPSSSRSRGGRD 106
D RDAEDAL +D + + GR++ +Q A+ R P+ +++ GR+
Sbjct: 59 EDVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEGRN 103
>gi|393906774|gb|EJD74392.1| hypothetical protein, variant [Loa loa]
Length = 324
Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 46/92 (50%), Positives = 59/92 (64%), Gaps = 1/92 (1%)
Query: 27 PDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAMDGRMLDGRELR 86
PDDLR +FER G V D+YIP D +TRESRGFA+V+F RDAEDAL ++G + GR +
Sbjct: 7 PDDLRALFERMGPVRDVYIPLDYYTRESRGFAYVKFEFTRDAEDALRKLNGASILGRPIE 66
Query: 87 VQMARYGRPPSSS-RSRGGRDRDRRRDRSRSR 117
V+ A R + R+R R R+R RSR
Sbjct: 67 VEWAEGQRKTKTEMRARDSYSSYRVRNRYRSR 98
>gi|297678669|ref|XP_002817185.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 12 [Pongo abelii]
Length = 261
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 54/89 (60%), Gaps = 5/89 (5%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRF 62
Y RPP SL + N+ T P+DLRR F R G + D+YIP D +TR RGFA+V+F
Sbjct: 4 YTRPP-----NTSLFIRNVADATRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQF 58
Query: 63 FDKRDAEDALDAMDGRMLDGRELRVQMAR 91
D RDAED L + + GR++ +Q A+
Sbjct: 59 EDVRDAEDXLFITHRKWVCGRQIEIQFAQ 87
>gi|147903707|ref|NP_001088237.1| serine/arginine-rich splicing factor 12 [Xenopus laevis]
gi|54038377|gb|AAH84231.1| LOC495068 protein [Xenopus laevis]
Length = 251
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 56/89 (62%), Gaps = 5/89 (5%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRF 62
Y RPP SL V N+ T P+DLRR F R G + D+Y+P D + R RGFA+++F
Sbjct: 4 YSRPP-----NTSLFVRNVGDATRPEDLRREFGRYGPIVDVYVPLDFYNRRPRGFAYIQF 58
Query: 63 FDKRDAEDALDAMDGRMLDGRELRVQMAR 91
D RDAEDAL ++ + + GR++ +Q A+
Sbjct: 59 EDVRDAEDALYNLNRKWVCGRQIEIQFAQ 87
>gi|326510839|dbj|BAJ91767.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 262
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 51/82 (62%)
Query: 9 RIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDA 68
R +G SL V N+ P+DLR FER G V D+Y+P+D +TRE RGFAFV F D DA
Sbjct: 32 REQGSGSLLVRNIPLSCRPEDLRVPFERFGPVRDVYLPKDYYTREPRGFAFVEFVDPYDA 91
Query: 69 EDALDAMDGRMLDGRELRVQMA 90
DA ++ + GRE+ V +A
Sbjct: 92 SDAQYHLNRSLFFGREITVVVA 113
>gi|300360554|ref|NP_001177938.1| serine/arginine-rich splicing factor 10 isoform 6 [Homo sapiens]
gi|332266733|ref|XP_003282352.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Nomascus
leucogenys]
gi|332807985|ref|XP_001166490.2| PREDICTED: uncharacterized protein LOC456627 isoform 4 [Pan
troglodytes]
gi|344287392|ref|XP_003415437.1| PREDICTED: serine/arginine-rich splicing factor 10-like isoform 3
[Loxodonta africana]
gi|345793665|ref|XP_866416.2| PREDICTED: serine/arginine-rich splicing factor 10 isoform 5 [Canis
lupus familiaris]
gi|403287346|ref|XP_003934910.1| PREDICTED: serine/arginine-rich splicing factor 10 [Saimiri
boliviensis boliviensis]
gi|410170861|ref|XP_003960063.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Homo
sapiens]
gi|426328343|ref|XP_004024962.1| PREDICTED: serine/arginine-rich splicing factor 10 [Gorilla gorilla
gorilla]
gi|194382312|dbj|BAG58911.1| unnamed protein product [Homo sapiens]
gi|410223012|gb|JAA08725.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
Length = 165
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 65/105 (61%), Gaps = 6/105 (5%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRF 62
Y RPP SL V N+ T +DLRR F R G + D+Y+P D +TR RGFA+V+F
Sbjct: 4 YLRPP-----NTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQF 58
Query: 63 FDKRDAEDALDAMDGRMLDGRELRVQMARYGR-PPSSSRSRGGRD 106
D RDAEDAL +D + + GR++ +Q A+ R P+ +++ GR+
Sbjct: 59 EDVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEGRN 103
>gi|327285770|ref|XP_003227605.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 10-like [Anolis carolinensis]
Length = 262
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 64/105 (60%), Gaps = 6/105 (5%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRF 62
Y RPP SL V N+ T +DLRR F R G + D+Y+P D +TR RGFA+V+F
Sbjct: 4 YLRPP-----NTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQF 58
Query: 63 FDKRDAEDALDAMDGRMLDGRELRVQMARYGR-PPSSSRSRGGRD 106
D RDAEDA +D + + GR++ +Q A+ R P+ +++ GR+
Sbjct: 59 EDVRDAEDAFHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEGRN 103
>gi|297834182|ref|XP_002884973.1| hypothetical protein ARALYDRAFT_478747 [Arabidopsis lyrata subsp.
lyrata]
gi|297330813|gb|EFH61232.1| hypothetical protein ARALYDRAFT_478747 [Arabidopsis lyrata subsp.
lyrata]
Length = 262
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 56/95 (58%), Gaps = 3/95 (3%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
SL V NL + +DLRR FE+ G V DIY+PRD +T + RGF F+++ D DA +A
Sbjct: 37 TSLLVRNLRHDCRQEDLRRPFEQFGPVKDIYLPRDYYTGDPRGFGFIQYVDPADAAEAKH 96
Query: 74 AMDGRMLDGRELRVQMARYGRPPSS---SRSRGGR 105
MDG L GREL V A R + +R RGGR
Sbjct: 97 HMDGSHLLGRELTVVFAEENRKKPTEMRTRDRGGR 131
>gi|71043780|ref|NP_001020909.1| serine/arginine-rich splicing factor 10 [Rattus norvegicus]
gi|68533686|gb|AAH98831.1| FUS interacting protein (serine-arginine rich) 1 [Rattus
norvegicus]
Length = 164
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 65/105 (61%), Gaps = 6/105 (5%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRF 62
Y RPP SL V N+ T +DLRR F R G + D+Y+P D +TR RGFA+V+F
Sbjct: 4 YLRPP-----NTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQF 58
Query: 63 FDKRDAEDALDAMDGRMLDGRELRVQMARYGR-PPSSSRSRGGRD 106
D RDAEDAL +D + + GR++ +Q A+ R P+ +++ GR+
Sbjct: 59 EDVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEGRN 103
>gi|426224259|ref|XP_004006291.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Ovis
aries]
Length = 262
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/105 (43%), Positives = 63/105 (60%), Gaps = 6/105 (5%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRF 62
Y RPP SL V N+ T DLRR F R G V D+Y+P D +TR RGFA+V+F
Sbjct: 4 YLRPP-----NTSLFVRNVADDTRYGDLRREFGRYGPVVDVYVPLDFYTRRPRGFAYVQF 58
Query: 63 FDKRDAEDALDAMDGRMLDGRELRVQMARYGR-PPSSSRSRGGRD 106
D RDAEDAL +D + + GR++ +Q A+ R P+ + + GR+
Sbjct: 59 EDVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKGKEGRN 103
>gi|390473557|ref|XP_003734621.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Callithrix
jacchus]
Length = 262
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 64/105 (60%), Gaps = 6/105 (5%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRF 62
Y PP SL V N+ T +DLRR F R G + D+Y+P D +TR RGFA+V+F
Sbjct: 4 YLHPP-----NTSLFVRNVANDTRSEDLRREFGRYGPIVDVYVPPDFYTRRPRGFAYVQF 58
Query: 63 FDKRDAEDALDAMDGRMLDGRELRVQMARYGR-PPSSSRSRGGRD 106
D RDAEDAL +D + + GR++ +Q A+ R P+ +++ GR+
Sbjct: 59 EDVRDAEDALRNLDRKWICGRQMEIQFAQGDRKTPNQMKAKEGRN 103
>gi|159470953|ref|XP_001693621.1| SR protein factor [Chlamydomonas reinhardtii]
gi|158283124|gb|EDP08875.1| SR protein factor [Chlamydomonas reinhardtii]
Length = 286
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 54/81 (66%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
VSL V NL +DLR FE+ GE+ D+YIPRD +T+ RGF F+ F + RDAEDA+
Sbjct: 51 VSLVVRNLPLDIRMEDLRAKFEKYGELKDVYIPRDYYTQRPRGFGFIEFKETRDAEDAMY 110
Query: 74 AMDGRMLDGRELRVQMARYGR 94
+D +++GRE+ V +R GR
Sbjct: 111 NLDRSVVNGREISVTFSREGR 131
>gi|255581554|ref|XP_002531582.1| serine/arginine rich splicing factor, putative [Ricinus communis]
gi|223528778|gb|EEF30785.1| serine/arginine rich splicing factor, putative [Ricinus communis]
Length = 216
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/132 (43%), Positives = 73/132 (55%), Gaps = 7/132 (5%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
SL V NL + +DLR F G + DIY+PRD +T E RGF FV++ D DA DA
Sbjct: 40 TSLLVRNLRHDCRTEDLRGPFGHFGPLKDIYLPRDYYTGEPRGFGFVQYVDPADAADAKH 99
Query: 74 AMDGRMLDGRELRVQMARYGRP-PSSSRSRG---GRDRDRRRD-RSRSRDRRYTRSRSFS 128
MDG +L GREL V A R P+ R+R GR DR+R + SR RY RS+S
Sbjct: 100 HMDGEILLGRELTVVFAEENRKKPAEMRARERVRGRSYDRKRSPQCYSRSPRYR--RSYS 157
Query: 129 SRSRSGSKSPRK 140
S+SPR+
Sbjct: 158 RSPLYYSRSPRQ 169
>gi|255584869|ref|XP_002533150.1| serine/arginine rich splicing factor, putative [Ricinus communis]
gi|223527045|gb|EEF29231.1| serine/arginine rich splicing factor, putative [Ricinus communis]
Length = 265
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 50/76 (65%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
SL V N+ P++LR FER G V D+YIP+D +T E RGFAFV+F D DA +A
Sbjct: 44 SLLVRNIPLDCRPEELRAPFERFGVVRDVYIPKDYYTGEPRGFAFVQFVDTYDAMEAQHR 103
Query: 75 MDGRMLDGRELRVQMA 90
M+G++ GRE+ V +A
Sbjct: 104 MNGQIFAGREISVVVA 119
>gi|401408831|ref|XP_003883864.1| CBR-RSP-4 protein, related [Neospora caninum Liverpool]
gi|325118281|emb|CBZ53832.1| CBR-RSP-4 protein, related [Neospora caninum Liverpool]
Length = 192
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 54/77 (70%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
SL + NL + T+PD +R++FE+ G V D+Y+P D FT+ RGF FV F+++ A++A+
Sbjct: 6 SLLIRNLCFETSPDRVRQIFEKFGRVRDVYLPLDHFTKRPRGFGFVEFYEEAAAQEAMRE 65
Query: 75 MDGRMLDGRELRVQMAR 91
MD M+DG E+ V +A+
Sbjct: 66 MDRTMIDGNEVYVIIAQ 82
>gi|363543465|ref|NP_001241742.1| SR repressor protein [Zea mays]
gi|195625068|gb|ACG34364.1| SR repressor protein [Zea mays]
Length = 269
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 48/80 (60%)
Query: 11 EGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAED 70
G VSL V N+ R P++LR FER G V D Y+PRD T E RGF FV F D DA +
Sbjct: 35 HGSVSLLVRNIPLRCRPEELRVPFERFGPVRDFYLPRDYHTGEPRGFGFVEFVDAYDASE 94
Query: 71 ALDAMDGRMLDGRELRVQMA 90
A M+ +M GRE+ V +A
Sbjct: 95 AQYHMNRQMFAGREITVVLA 114
>gi|410170863|ref|XP_003960064.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Homo
sapiens]
Length = 146
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 65/105 (61%), Gaps = 6/105 (5%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRF 62
Y RPP SL V N+ T +DLRR F R G + D+Y+P D +TR RGFA+V+F
Sbjct: 4 YLRPP-----NTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQF 58
Query: 63 FDKRDAEDALDAMDGRMLDGRELRVQMARYGR-PPSSSRSRGGRD 106
D RDAEDAL +D + + GR++ +Q A+ R P+ +++ GR+
Sbjct: 59 EDVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEGRN 103
>gi|291404036|ref|XP_002718366.1| PREDICTED: FUS interacting protein (serine-arginine rich) 1
[Oryctolagus cuniculus]
Length = 182
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 64/105 (60%), Gaps = 6/105 (5%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRF 62
Y RPP SL V N+ T +DLRR F R G + D+Y+P D +TR RGFA+V+F
Sbjct: 4 YLRPP-----NTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPIDFYTRRPRGFAYVQF 58
Query: 63 FDKRDAEDALDAMDGRMLDGRELRVQMARYGR-PPSSSRSRGGRD 106
D RDAEDAL +D + + G ++ +Q A+ R P+ +++ GR+
Sbjct: 59 EDVRDAEDALHNLDRKWICGHQIEIQFAQGDRKTPNQMKAKEGRN 103
>gi|225449547|ref|XP_002283722.1| PREDICTED: uncharacterized protein LOC100258210 [Vitis vinifera]
Length = 276
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 50/76 (65%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
SL V N+ P+DLR FER G V D+Y+P+D +T E RGFAFV+F D +A +A
Sbjct: 41 SLLVRNIPLNCRPEDLRVPFERFGLVRDVYLPKDYYTGEPRGFAFVQFVDPYEASEAQYH 100
Query: 75 MDGRMLDGRELRVQMA 90
M+G++ GRE+ V +A
Sbjct: 101 MNGQIFAGREISVVVA 116
>gi|303282859|ref|XP_003060721.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226458192|gb|EEH55490.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 93
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 57/93 (61%), Gaps = 2/93 (2%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
VSL V NL Y T +++R FE GEV D+YIP+D T+ +GFAFV F D R+AE A D
Sbjct: 1 VSLLVRNLPYDATVEEIRTAFEEYGEVRDVYIPKDYHTKRPKGFAFVEFPDPREAELAED 60
Query: 74 AMDGRMLDGRELRVQMARYGR--PPSSSRSRGG 104
+D L G E+ VQ+A+ R P + RGG
Sbjct: 61 KLDKTRLCGVEVSVQVAKQKRKDPSFFQQGRGG 93
>gi|291399268|ref|XP_002716024.1| PREDICTED: FUS interacting protein (serine-arginine rich) 1
[Oryctolagus cuniculus]
Length = 182
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 61/94 (64%), Gaps = 1/94 (1%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
SL V N+ T +DLRR F R G + D+Y+P D +TR RGFA+V+F D RDAEDAL
Sbjct: 10 TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALH 69
Query: 74 AMDGRMLDGRELRVQMARYGR-PPSSSRSRGGRD 106
+D + + GR++ +Q A+ R P+ +++ GR+
Sbjct: 70 NLDRKWICGRQIEIQFAQGDRKTPNQMKAKEGRN 103
>gi|388509350|gb|AFK42741.1| unknown [Lotus japonicus]
Length = 221
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/134 (38%), Positives = 69/134 (51%), Gaps = 16/134 (11%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
SL V NL T +DL F G + D+Y+PRD +T RGF FV++ D DA DA
Sbjct: 39 TSLLVRNLHRDTRTEDLHGPFSHFGPIKDVYLPRDYYTGNPRGFGFVQYVDPADAADAKY 98
Query: 74 AMDGRMLDGRELRVQMARYGRPPSSSRSRGGRDRDRRRDRSRSRDRRYTRSRSFSSR--S 131
+DG++L GREL V A R ++ R+R+R TR RS+ R
Sbjct: 99 HLDGQILLGRELTVVFAEENR--------------KKPAEMRARERHSTRERSYDYRRSP 144
Query: 132 RSGSKSPRKARSKS 145
R S+SPR AR+ S
Sbjct: 145 RGYSRSPRYARTYS 158
>gi|440577321|emb|CCI55328.1| PH01B001I13.24 [Phyllostachys edulis]
Length = 196
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 59/87 (67%)
Query: 5 RPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFD 64
R PP + V+L ++ L++RTT + LR FER G++ ++ + DR + RGFAF+ + +
Sbjct: 107 RSPPSLHAHVALFIEGLSFRTTEESLRSAFERFGQLTEVNLVMDRVAKRPRGFAFLSYAN 166
Query: 65 KRDAEDALDAMDGRMLDGRELRVQMAR 91
+ ++++A++ M G+ LDGR + V++A+
Sbjct: 167 EEESKNAMEGMHGKFLDGRVIFVEVAK 193
>gi|256092434|ref|XP_002581942.1| serine/arginine rich splicing factor [Schistosoma mansoni]
gi|353230936|emb|CCD77353.1| putative serine/arginine rich splicing factor [Schistosoma mansoni]
Length = 80
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/61 (62%), Positives = 47/61 (77%)
Query: 41 GDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAMDGRMLDGRELRVQMARYGRPPSSSR 100
GDIYIPRD +T ESRGFAFVR+ R+A+ A+ MDG +DGRE+RVQ A+YGRP + R
Sbjct: 20 GDIYIPRDPYTFESRGFAFVRYCTDREADCAIRGMDGHKVDGREVRVQRAKYGRPTPNRR 79
Query: 101 S 101
S
Sbjct: 80 S 80
>gi|346469351|gb|AEO34520.1| hypothetical protein [Amblyomma maculatum]
Length = 204
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 56/89 (62%), Gaps = 5/89 (5%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRF 62
Y RPP SL + N+ T PDDLR +F + G + D+YIP D +TR RGFA+V+F
Sbjct: 5 YSRPP-----NSSLFIRNVPDGTRPDDLRSLFGKYGPLTDVYIPVDYYTRRPRGFAYVQF 59
Query: 63 FDKRDAEDALDAMDGRMLDGRELRVQMAR 91
D RDAEDA+ ++D GREL ++ A+
Sbjct: 60 EDLRDAEDAMYSLDRTRFYGRELEIEFAQ 88
>gi|126310597|ref|XP_001376489.1| PREDICTED: serine/arginine-rich splicing factor 12-like
[Monodelphis domestica]
Length = 257
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 58/98 (59%), Gaps = 14/98 (14%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR- 61
Y RPP SL V N+T T P+DLRR F R G + D+YIP D +TR RGFA+++
Sbjct: 4 YTRPP-----NTSLFVRNVTDATRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYIQY 58
Query: 62 --------FFDKRDAEDALDAMDGRMLDGRELRVQMAR 91
F D RDAEDAL ++ + + GR++ +Q A+
Sbjct: 59 PLFHSLVIFEDVRDAEDALYNLNKKWVCGRQIEIQFAQ 96
>gi|119568946|gb|EAW48561.1| serine-arginine repressor protein (35 kDa), isoform CRA_a [Homo
sapiens]
Length = 262
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 56/90 (62%), Gaps = 6/90 (6%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRF 62
Y RPP SL + N+ T P+DLRR F R G + D+YIP D +TR RGFA++
Sbjct: 4 YTRPP-----NTSLFIRNVADATRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYLVI 58
Query: 63 F-DKRDAEDALDAMDGRMLDGRELRVQMAR 91
F D RDAEDAL ++ + + GR++ +Q A+
Sbjct: 59 FEDVRDAEDALYNLNRKWVCGRQIEIQFAQ 88
>gi|384247695|gb|EIE21181.1| RNA-binding domain-containing protein [Coccomyxa subellipsoidea
C-169]
Length = 184
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 53/81 (65%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
SL V NL+ T DDLR V E+ G + D+YIP+D ++ E RG F+ F D RDAEDA+
Sbjct: 14 CSLLVRNLSRSVTLDDLRYVAEKYGRLRDVYIPKDYYSGEPRGIGFLEFTDPRDAEDAIY 73
Query: 74 AMDGRMLDGRELRVQMARYGR 94
+D +++ G+E+ V +A GR
Sbjct: 74 GLDRKVIQGKEVSVVLALQGR 94
>gi|334183335|ref|NP_001185236.1| SC35-like splicing factor 33 [Arabidopsis thaliana]
gi|332195103|gb|AEE33224.1| SC35-like splicing factor 33 [Arabidopsis thaliana]
Length = 300
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/115 (45%), Positives = 63/115 (54%), Gaps = 17/115 (14%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFT------------RESRGFAFVR 61
SL V NL + +DLR+ FE+ G V DIY+PRD +T R+ RGF FV+
Sbjct: 36 TSLLVRNLRHDCRQEDLRKSFEQFGPVKDIYLPRDYYTGSHLCTDTCKASRDPRGFGFVQ 95
Query: 62 FFDKRDAEDALDAMDGRMLDGRELRVQMARYGR-PPSSSRSR----GGRDRDRRR 111
F D DA DA MDG +L GREL V A R P+ R+R G R RDRRR
Sbjct: 96 FMDPADAADAKHHMDGYLLLGRELTVVFAEENRKKPTEMRARERGGGSRFRDRRR 150
>gi|47209886|emb|CAF94406.1| unnamed protein product [Tetraodon nigroviridis]
Length = 98
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 60/91 (65%), Gaps = 7/91 (7%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRF 62
Y RPP SL V N++ + P+DLRR F R G + D+YIP D +TR+ RGFA++++
Sbjct: 4 YMRPP-----NTSLFVRNISDESRPEDLRREFGRYGPIVDVYIPLDFYTRQPRGFAYIQY 58
Query: 63 F--DKRDAEDALDAMDGRMLDGRELRVQMAR 91
D RDAEDAL ++D + + GR++ +Q A+
Sbjct: 59 IFEDVRDAEDALHSLDRKWVCGRQIEIQFAQ 89
>gi|296086246|emb|CBI31687.3| unnamed protein product [Vitis vinifera]
Length = 353
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 50/76 (65%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
SL V N+ P+DLR FER G V D+Y+P+D +T E RGFAFV+F D +A +A
Sbjct: 118 SLLVRNIPLNCRPEDLRVPFERFGLVRDVYLPKDYYTGEPRGFAFVQFVDPYEASEAQYH 177
Query: 75 MDGRMLDGRELRVQMA 90
M+G++ GRE+ V +A
Sbjct: 178 MNGQIFAGREISVVVA 193
>gi|390480607|ref|XP_003735962.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Callithrix
jacchus]
Length = 123
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 64/105 (60%), Gaps = 6/105 (5%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRF 62
Y RPP SL V N+ T +DLRR F R G + D+Y+P D +TR RGFA+V+F
Sbjct: 4 YLRPP-----NTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQF 58
Query: 63 FDKRDAEDALDAMDGRMLDGRELRVQMARYGR-PPSSSRSRGGRD 106
D RDAEDAL +D + + GR++ +Q A+ R P+ + + GR+
Sbjct: 59 EDVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKDKEGRN 103
>gi|413947426|gb|AFW80075.1| hypothetical protein ZEAMMB73_562035 [Zea mays]
Length = 661
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 55/88 (62%), Gaps = 5/88 (5%)
Query: 4 GRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFF 63
GRP +++ ++ + + + PDDLRR F + G V DIY+ D +TRE RGF F++ F
Sbjct: 571 GRPRTQVQHLMQIGL-----KGWPDDLRRPFGKFGPVKDIYLSNDYYTREPRGFGFIQNF 625
Query: 64 DKRDAEDALDAMDGRMLDGRELRVQMAR 91
D DA DA MDG+ML GRE+ V + R
Sbjct: 626 DPEDASDAKYHMDGKMLLGREIVVVLQR 653
>gi|297478612|ref|XP_002690241.1| PREDICTED: uncharacterized protein LOC787762 [Bos taurus]
gi|296484064|tpg|DAA26179.1| TPA: serine-arginine repressor protein (35kDa) (SRrp35)-like [Bos
taurus]
Length = 268
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 57/96 (59%), Gaps = 12/96 (12%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR- 61
Y RPP SL V N+ T P+DLRR F R G + D+YIP D +TR RGFA+V+
Sbjct: 4 YTRPP-----NTSLFVRNVADATRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQY 58
Query: 62 ------FFDKRDAEDALDAMDGRMLDGRELRVQMAR 91
F D RDAEDAL ++ + + GR++ +Q A+
Sbjct: 59 PLFYFIFEDVRDAEDALYNLNRKWVCGRQIEIQFAQ 94
>gi|147899629|ref|NP_001079656.1| serine/arginine-rich splicing factor 10 [Xenopus laevis]
gi|28302303|gb|AAH46695.1| MGC53149 protein [Xenopus laevis]
Length = 258
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 54/89 (60%), Gaps = 5/89 (5%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRF 62
Y RPP SL V N+ +DLRR F R G + D+Y+P D + R RGFA+V+F
Sbjct: 4 YLRPP-----NSSLFVRNIADDIRSEDLRREFGRYGPIVDVYVPLDYYNRRPRGFAYVQF 58
Query: 63 FDKRDAEDALDAMDGRMLDGRELRVQMAR 91
D RDAEDAL +D + + GR++ +Q A+
Sbjct: 59 EDVRDAEDALHNLDKKWICGRQIEIQFAQ 87
>gi|449459926|ref|XP_004147697.1| PREDICTED: uncharacterized protein LOC101221788 [Cucumis sativus]
Length = 286
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 48/76 (63%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
SL V N+ P++LR FER G V D+YIP+D +T E RGFAFV F D +A +A
Sbjct: 52 SLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYH 111
Query: 75 MDGRMLDGRELRVQMA 90
M+G+ GRE+ V +A
Sbjct: 112 MNGKKFAGREITVVLA 127
>gi|224112763|ref|XP_002316285.1| predicted protein [Populus trichocarpa]
gi|222865325|gb|EEF02456.1| predicted protein [Populus trichocarpa]
Length = 232
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 50/76 (65%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
SL V N+ PD+LR FER G V D+YIP+D +T E RGFAFV+F D +A +A
Sbjct: 7 SLLVRNIPLDCRPDELRGPFERFGVVRDVYIPKDYYTGEPRGFAFVQFVDPYEAMEAQHR 66
Query: 75 MDGRMLDGRELRVQMA 90
M+G++ GR++ V +A
Sbjct: 67 MNGQIFAGRQISVVLA 82
>gi|168056094|ref|XP_001780057.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668555|gb|EDQ55160.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 225
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 49/80 (61%)
Query: 11 EGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAED 70
E SL V N+ T DDLR FER G V D+Y+PRD +T RGF FV+F + RDA +
Sbjct: 53 EPPTSLLVRNIPRDCTADDLRIPFERYGVVKDVYLPRDYYTGLPRGFGFVQFLEPRDAAE 112
Query: 71 ALDAMDGRMLDGRELRVQMA 90
A +D +++ GRE+ V A
Sbjct: 113 AQYCLDHQLIAGREITVVFA 132
>gi|307133716|ref|NP_001182514.1| splicing factor, arginine/serine-rich 13B [Macaca mulatta]
gi|402867628|ref|XP_003897943.1| PREDICTED: serine/arginine-rich splicing factor 12 [Papio anubis]
Length = 267
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 57/95 (60%), Gaps = 11/95 (11%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR- 61
Y RPP SL + N+ T P+DLRR F R G + D+YIP D +TR RGFA+V+
Sbjct: 4 YTRPP-----NTSLFIRNVADATRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQY 58
Query: 62 -----FFDKRDAEDALDAMDGRMLDGRELRVQMAR 91
F D RDAEDAL ++ + + GR++ +Q A+
Sbjct: 59 PLLFIFEDVRDAEDALYNLNRKWVCGRQIEIQFAQ 93
>gi|390337101|ref|XP_800412.2| PREDICTED: serine/arginine-rich splicing factor 12-like
[Strongylocentrotus purpuratus]
Length = 205
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 55/89 (61%), Gaps = 5/89 (5%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTT-PDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
YG PP SL V NL + +D+R +F + G + DIYIP D +TRE RGFA+V+
Sbjct: 5 YGSRPPN----TSLYVRNLPDDVSRAEDMRNLFGKYGPISDIYIPLDYYTREPRGFAYVQ 60
Query: 62 FFDKRDAEDALDAMDGRMLDGRELRVQMA 90
F D RDAEDA+ A+D GREL +Q A
Sbjct: 61 FDDIRDAEDAMYALDRYRFYGRELEIQYA 89
>gi|313231155|emb|CBY19153.1| unnamed protein product [Oikopleura dioica]
gi|313242052|emb|CBY34232.1| unnamed protein product [Oikopleura dioica]
Length = 266
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
SL V N+ D+L R F R G + D+YIPRD + + RGFA+V+F D DAEDA +
Sbjct: 12 SLFVRNIADDIDQDELTREFSRYGSIKDVYIPRDYYNKRPRGFAYVQFADIHDAEDAQEG 71
Query: 75 MDGRMLDGRELRVQMARYGR-PPSSSRSR 102
MDGR + GR + VQ A+ R P S R+R
Sbjct: 72 MDGRKVCGRFIDVQFAKGDRKSPGSMRTR 100
>gi|194688600|gb|ACF78384.1| unknown [Zea mays]
gi|194700100|gb|ACF84134.1| unknown [Zea mays]
gi|219887871|gb|ACL54310.1| unknown [Zea mays]
gi|224035011|gb|ACN36581.1| unknown [Zea mays]
gi|238908719|gb|ACF81490.2| unknown [Zea mays]
gi|448878248|gb|AGE46087.1| arginine/serine-rich splicing factor SCL25B transcript IV [Zea
mays]
Length = 209
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 50/77 (64%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
SL V NL P+DLRR F + G V DIY+PRD +T + RGF FV+++D DA DA
Sbjct: 37 TSLLVRNLRRDCRPEDLRRPFGQFGRVKDIYLPRDYYTGDPRGFGFVQYYDPADAADAKY 96
Query: 74 AMDGRMLDGRELRVQMA 90
MDG+++ GR++ V A
Sbjct: 97 YMDGQVVLGRQITVVFA 113
>gi|209878256|ref|XP_002140569.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
gi|209556175|gb|EEA06220.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
Length = 244
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 63/112 (56%), Gaps = 5/112 (4%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
SL + +L + T P +RRVFER G++ D+Y+P D T+ RGF FV + ++ DA A+
Sbjct: 14 SLLIRSLRFETPPSLVRRVFERFGQIRDVYLPVDFHTKRPRGFGFVEYVEESDALAAIQR 73
Query: 75 MDGRMLDGRELRVQMARYGR-PPSSSRSRGGRDRDRRRDRSRSRDRRYTRSR 125
M+G LDG ++ V A+ GR P S R R + R RS D RY S
Sbjct: 74 MNGANLDGSQIHVTFAQEGRKSPESMRHRDNENYYTR----RSIDSRYNSSH 121
>gi|358248974|ref|NP_001239716.1| uncharacterized protein LOC100816913 [Glycine max]
gi|255645650|gb|ACU23319.1| unknown [Glycine max]
Length = 205
Score = 75.5 bits (184), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 60/104 (57%), Gaps = 2/104 (1%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
SL V NL P+DL F + G + D+Y+PRD +T E RGF FV++ D DA DA
Sbjct: 40 TSLLVRNLNRDCRPEDLHGPFGQFGPLKDVYLPRDYYTGEPRGFGFVQYVDPADAADAKY 99
Query: 74 AMDGRMLDGRELRVQMARYGR-PPSSSRSRGGRDRDRRRDRSRS 116
MDGR+L GRE+ V A R P+ R+R R RDR D RS
Sbjct: 100 HMDGRILLGREITVVFAEENRKKPAEMRAREHR-RDRSHDYRRS 142
>gi|448878421|gb|AGE46173.1| arginine/serine-rich splicing factor SCL33 transcript I
[Physcomitrella patens subsp. patens]
Length = 286
Score = 75.1 bits (183), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 49/80 (61%)
Query: 11 EGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAED 70
E SL V N+ T DDLR FER G V D+Y+PRD +T RGF FV+F + RDA +
Sbjct: 53 EPPTSLLVRNIPRDCTADDLRIPFERYGVVKDVYLPRDYYTGLPRGFGFVQFLEPRDAAE 112
Query: 71 ALDAMDGRMLDGRELRVQMA 90
A +D +++ GRE+ V A
Sbjct: 113 AQYCLDHQLIAGREITVVFA 132
>gi|395521768|ref|XP_003764987.1| PREDICTED: serine/arginine-rich splicing factor 10 [Sarcophilus
harrisii]
Length = 347
Score = 75.1 bits (183), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 59/92 (64%), Gaps = 1/92 (1%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L+V L +DLRR F R G + D+Y+P D +TR RGFA+V+F D RDAEDAL +
Sbjct: 97 LRVWRLVKDAGSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNL 156
Query: 76 DGRMLDGRELRVQMARYGR-PPSSSRSRGGRD 106
D + + GR++ +Q A+ R P+ +++ GR+
Sbjct: 157 DRKWICGRQIEIQFAQGDRKTPNQMKAKEGRN 188
>gi|354466061|ref|XP_003495494.1| PREDICTED: serine/arginine-rich splicing factor 12-like, partial
[Cricetulus griseus]
Length = 249
Score = 75.1 bits (183), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 50/74 (67%)
Query: 18 VDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAMDG 77
V N + P+DLRR F R G + D+YIP D +TR RGFA+V+F D RDAEDAL ++
Sbjct: 2 VRNCAGDSRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQFEDVRDAEDALYNLNR 61
Query: 78 RMLDGRELRVQMAR 91
+ + GR++ +Q A+
Sbjct: 62 KWVCGRQIEIQFAQ 75
>gi|294947288|ref|XP_002785313.1| serine/arginine rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
gi|239899086|gb|EER17109.1| serine/arginine rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
Length = 281
Score = 75.1 bits (183), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 50/81 (61%)
Query: 11 EGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAED 70
EG SL V NL P LR FER G V D+YIP D +++ RGF FV F D RDA++
Sbjct: 142 EGSCSLLVRNLPDEVNPMRLRDAFERFGYVRDVYIPLDYYSKRPRGFGFVEFDDPRDADE 201
Query: 71 ALDAMDGRMLDGRELRVQMAR 91
A DAMDG+ L + V++A+
Sbjct: 202 ARDAMDGQRLGSNYVEVEVAK 222
>gi|296198765|ref|XP_002746858.1| PREDICTED: serine/arginine-rich splicing factor 12 [Callithrix
jacchus]
Length = 268
Score = 75.1 bits (183), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 12/96 (12%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR- 61
Y RPP SL + N+ T P+DLRR F R G + D+YIP D +TR RGFA+V+
Sbjct: 4 YTRPP-----NTSLFIRNVADATRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQY 58
Query: 62 ------FFDKRDAEDALDAMDGRMLDGRELRVQMAR 91
F D RDAEDAL ++ + + GR++ +Q A+
Sbjct: 59 PLFYFIFEDVRDAEDALYNLNRKWVCGRQIEIQFAQ 94
>gi|114608450|ref|XP_518634.2| PREDICTED: serine/arginine-rich splicing factor 12 [Pan
troglodytes]
Length = 268
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 12/96 (12%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR- 61
Y RPP SL + N+ T P+DLRR F R G + D+YIP D +TR RGFA+V+
Sbjct: 4 YTRPP-----NTSLFIRNVADATRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQY 58
Query: 62 ------FFDKRDAEDALDAMDGRMLDGRELRVQMAR 91
F D RDAEDAL ++ + + GR++ +Q A+
Sbjct: 59 PLFYFIFEDVRDAEDALYNLNRKWVCGRQIEIQFAQ 94
>gi|448878423|gb|AGE46174.1| arginine/serine-rich splicing factor SCL33 transcript II
[Physcomitrella patens subsp. patens]
Length = 248
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 49/80 (61%)
Query: 11 EGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAED 70
E SL V N+ T DDLR FER G V D+Y+PRD +T RGF FV+F + RDA +
Sbjct: 53 EPPTSLLVRNIPRDCTADDLRIPFERYGVVKDVYLPRDYYTGLPRGFGFVQFLEPRDAAE 112
Query: 71 ALDAMDGRMLDGRELRVQMA 90
A +D +++ GRE+ V A
Sbjct: 113 AQYCLDHQLIAGREITVVFA 132
>gi|195631119|gb|ACG36660.1| splicing factor, arginine/serine-rich 4 [Zea mays]
gi|195642888|gb|ACG40912.1| splicing factor, arginine/serine-rich 4 [Zea mays]
gi|195645762|gb|ACG42349.1| splicing factor, arginine/serine-rich 4 [Zea mays]
Length = 209
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 50/77 (64%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
SL V NL P+DLRR F + G V DIY+PRD +T + RGF FV+++D DA DA
Sbjct: 37 TSLLVRNLRRDCRPEDLRRPFGQFGRVKDIYLPRDYYTGDPRGFGFVQYYDPADAADAKY 96
Query: 74 AMDGRMLDGRELRVQMA 90
MDG+++ GR++ V A
Sbjct: 97 YMDGQVVLGRQITVVFA 113
>gi|449524006|ref|XP_004169014.1| PREDICTED: uncharacterized protein LOC101227075 [Cucumis sativus]
Length = 305
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 48/76 (63%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
SL V N+ P++LR FER G V D+YIP+D +T E RGFAFV F D +A +A
Sbjct: 54 SLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYH 113
Query: 75 MDGRMLDGRELRVQMA 90
M+G+ GRE+ V +A
Sbjct: 114 MNGKKFAGREITVVLA 129
>gi|300122958|emb|CBK23965.2| unnamed protein product [Blastocystis hominis]
Length = 173
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
M RPP + + S+++DNL T +DL FE+ G++ DIYIPR+ +RGF FV
Sbjct: 1 MDNTRPPTDVNSLFSVRIDNLPNDATKEDLNNHFEKYGKIADIYIPRNTHDGGNRGFGFV 60
Query: 61 RFFDKRDAEDALDAMDGRMLDGRELRVQMA 90
R+ ++ +A ALD +G L+G+ +RV MA
Sbjct: 61 RYVNEDEARKALDE-NGEELNGQTMRVSMA 89
>gi|116782736|gb|ABK22635.1| unknown [Picea sitchensis]
Length = 275
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 50/80 (62%)
Query: 11 EGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAED 70
E SL V N+ D+LR FER G + D+Y+P+D +T E RGF FV+F D +DA +
Sbjct: 33 EPNTSLLVRNIPRDCRSDELRMPFERFGPLKDVYLPKDFYTGEPRGFGFVQFMDPQDAAE 92
Query: 71 ALDAMDGRMLDGRELRVQMA 90
A MDG+ + GRE+ V +A
Sbjct: 93 AQYHMDGQYIGGREITVVLA 112
>gi|226492712|ref|NP_001150206.1| LOC100283836 [Zea mays]
gi|195637558|gb|ACG38247.1| SR repressor protein [Zea mays]
Length = 258
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 50/82 (60%)
Query: 9 RIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDA 68
R EG SL V N+ +DLR FER G V D+YIP+D ++ E RGFAFV F D DA
Sbjct: 33 RKEGSGSLLVRNIPLSVRAEDLRVPFERFGPVRDVYIPKDYYSGEPRGFAFVEFVDPYDA 92
Query: 69 EDALDAMDGRMLDGRELRVQMA 90
+A M+ ++ GRE+ V +A
Sbjct: 93 SEAQYHMNRQVFFGREIAVVLA 114
>gi|224139940|ref|XP_002323350.1| predicted protein [Populus trichocarpa]
gi|222867980|gb|EEF05111.1| predicted protein [Populus trichocarpa]
Length = 131
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
SL V NL P+DLR F R G + D+Y+PRD +T E RGF FV++ + DA DA
Sbjct: 38 TSLLVRNLRLDCRPEDLRGPFGRFGPLKDVYLPRDYYTGEPRGFGFVQYLEPADAADAKH 97
Query: 74 AMDGRMLDGRELRVQMARYGR-PPSSSRSR 102
MDG +L GREL V A R P+ R+R
Sbjct: 98 HMDGEILFGRELTVVFAEENRKKPAEMRAR 127
>gi|448878226|gb|AGE46076.1| arginine/serine-rich splicing factor SCL30 transcript II [Zea mays]
Length = 259
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 50/82 (60%)
Query: 9 RIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDA 68
R EG SL V N+ +DLR FER G V D+YIP+D ++ E RGFAFV F D DA
Sbjct: 33 RKEGSGSLLVRNIPLSVRAEDLRVPFERFGPVRDVYIPKDYYSGEPRGFAFVEFVDPYDA 92
Query: 69 EDALDAMDGRMLDGRELRVQMA 90
+A M+ ++ GRE+ V +A
Sbjct: 93 SEAQYHMNRQVFFGREIAVVLA 114
>gi|448878427|gb|AGE46176.1| arginine/serine-rich splicing factor SCL42 transcript I
[Physcomitrella patens subsp. patens]
Length = 370
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 50/80 (62%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
SL V N+ + +DLR FER G V D+Y+PRD +T + RGF FV+F + RDA +A
Sbjct: 43 SLLVRNIPRDCSAEDLRIPFERYGVVKDVYLPRDYYTGQPRGFGFVQFLEPRDAAEAQYC 102
Query: 75 MDGRMLDGRELRVQMARYGR 94
+D +++ GRE+ V A R
Sbjct: 103 LDHQLIQGREITVVFAEENR 122
>gi|194699092|gb|ACF83630.1| unknown [Zea mays]
gi|448878224|gb|AGE46075.1| arginine/serine-rich splicing factor SCL30 transcript I [Zea mays]
Length = 258
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 50/82 (60%)
Query: 9 RIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDA 68
R EG SL V N+ +DLR FER G V D+YIP+D ++ E RGFAFV F D DA
Sbjct: 33 RKEGSGSLLVRNIPLSVRAEDLRVPFERFGPVRDVYIPKDYYSGEPRGFAFVEFVDPYDA 92
Query: 69 EDALDAMDGRMLDGRELRVQMA 90
+A M+ ++ GRE+ V +A
Sbjct: 93 SEAQYHMNRQVFFGREIAVVLA 114
>gi|348526131|ref|XP_003450574.1| PREDICTED: serine/arginine-rich splicing factor 10-like
[Oreochromis niloticus]
Length = 257
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 12/96 (12%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR- 61
Y RPP SL V N+ + P+DLRR F R G + D+YIP D +TR RGFA+++
Sbjct: 4 YLRPP-----NTSLFVRNIADESRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYIQY 58
Query: 62 ------FFDKRDAEDALDAMDGRMLDGRELRVQMAR 91
F D RDAEDAL +D + + GR++ +Q A+
Sbjct: 59 PLFFHMFEDVRDAEDALHNLDRKWVCGRQIEIQFAQ 94
>gi|344264100|ref|XP_003404132.1| PREDICTED: serine/arginine-rich splicing factor 12-like [Loxodonta
africana]
Length = 387
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 47/65 (72%)
Query: 27 PDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAMDGRMLDGRELR 86
P+DLRR F R G + D+YIP D +TR RGFA+V+F D RDAEDAL ++ + + GR++
Sbjct: 149 PEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQFEDVRDAEDALYNLNRKWVCGRQIE 208
Query: 87 VQMAR 91
+Q A+
Sbjct: 209 IQFAQ 213
>gi|327261517|ref|XP_003215576.1| PREDICTED: serine/arginine-rich splicing factor 12-like [Anolis
carolinensis]
Length = 261
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 56/94 (59%), Gaps = 10/94 (10%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR- 61
Y RPP SL V N+ T P+DLR F R G V D+Y+P D +TR RGFA+++
Sbjct: 4 YTRPP-----NTSLFVRNVADATRPEDLRHEFGRYGPVVDVYVPLDFYTRRPRGFAYIQY 58
Query: 62 ----FFDKRDAEDALDAMDGRMLDGRELRVQMAR 91
F D RDAEDAL ++ + + GR++ +Q A+
Sbjct: 59 PLFMFEDVRDAEDALYNLNRKWVCGRQIEIQFAQ 92
>gi|168044871|ref|XP_001774903.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673797|gb|EDQ60315.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 257
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 50/80 (62%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
SL V N+ + +DLR FER G V D+Y+PRD +T + RGF FV+F + RDA +A
Sbjct: 43 SLLVRNIPRDCSAEDLRIPFERYGVVKDVYLPRDYYTGQPRGFGFVQFLEPRDAAEAQYC 102
Query: 75 MDGRMLDGRELRVQMARYGR 94
+D +++ GRE+ V A R
Sbjct: 103 LDHQLIQGREITVVFAEENR 122
>gi|410966510|ref|XP_003989775.1| PREDICTED: serine/arginine-rich splicing factor 10 [Felis catus]
Length = 191
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 55/80 (68%), Gaps = 1/80 (1%)
Query: 28 DDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAMDGRMLDGRELRV 87
+DLRR F R G + D+Y+P D +TR RGFA+V+F D RDAEDAL +D + + GR++ +
Sbjct: 42 EDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEI 101
Query: 88 QMARYGR-PPSSSRSRGGRD 106
Q A+ R P+ +++ GR+
Sbjct: 102 QFAQGDRKTPNQMKAKEGRN 121
>gi|242046420|ref|XP_002461081.1| hypothetical protein SORBIDRAFT_02g040350 [Sorghum bicolor]
gi|241924458|gb|EER97602.1| hypothetical protein SORBIDRAFT_02g040350 [Sorghum bicolor]
gi|448878346|gb|AGE46136.1| arginine/serine-rich splicing factor SCL25B transcript I [Sorghum
bicolor]
gi|448878348|gb|AGE46137.1| arginine/serine-rich splicing factor SCL25B transcript II [Sorghum
bicolor]
Length = 209
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 50/77 (64%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
SL V NL P+DLRR F + G + DIY+PRD +T E RGF FV+++D DA DA
Sbjct: 37 TSLLVRNLRRDCRPEDLRRPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYYDPDDAADAKY 96
Query: 74 AMDGRMLDGRELRVQMA 90
MDG+++ GR++ V A
Sbjct: 97 YMDGQVVLGRQITVVFA 113
>gi|356553842|ref|XP_003545260.1| PREDICTED: uncharacterized protein LOC100792397 [Glycine max]
Length = 271
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 49/76 (64%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
SL V N+ P++LR FER G V D+YIP+D ++ E RGFAFV+F D DA +A
Sbjct: 41 SLLVRNIPLDCRPEELRVPFERFGPVRDVYIPKDYYSGEPRGFAFVQFVDPYDASEAQYH 100
Query: 75 MDGRMLDGRELRVQMA 90
M+ ++ GRE+ V +A
Sbjct: 101 MNRQIFAGREISVVVA 116
>gi|427783563|gb|JAA57233.1| Putative splicing factor sc35 [Rhipicephalus pulchellus]
Length = 214
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 63/110 (57%), Gaps = 5/110 (4%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MS G P + ++ V NL ++ T +DL ++FE+ G+V + + +D+ T +S+G AFV
Sbjct: 1 MSAGLKPSK----STVYVSNLPFKLTNNDLHQIFEKYGKVAKVTVMKDKQTWKSKGVAFV 56
Query: 61 RFFDKRDAEDALDAMDGRMLDGRELRVQMARY-GRPPSSSRSRGGRDRDR 109
F D A A++ ++L GR LR +A+Y GR P R + +D+ R
Sbjct: 57 LFMDPESASKCASALNNQLLMGRTLRASIAKYNGRAPEFIRRKEYKDKSR 106
>gi|403308137|ref|XP_003944528.1| PREDICTED: cold-inducible RNA-binding protein isoform 1 [Saimiri
boliviensis boliviensis]
gi|403308139|ref|XP_003944529.1| PREDICTED: cold-inducible RNA-binding protein isoform 2 [Saimiri
boliviensis boliviensis]
Length = 172
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 58/88 (65%), Gaps = 3/88 (3%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L V L++ T L +VF + G++ ++ + +DR T+ SRGF FV F + DA+DA+ AM
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 76 DGRMLDGRELRVQMARYGRPPSSSRSRG 103
+G+ +DGR++RV A G+ P SRSRG
Sbjct: 68 NGKSVDGRQIRVDQA--GKSP-DSRSRG 92
>gi|356499101|ref|XP_003518382.1| PREDICTED: uncharacterized protein LOC100804294 [Glycine max]
Length = 276
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 49/76 (64%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
SL V N+ P++LR FER G V D+YIP+D ++ E RGFAFV+F D DA +A
Sbjct: 48 SLLVRNIPLDCRPEELRVPFERFGPVRDVYIPKDYYSGEPRGFAFVQFVDPYDASEAQYH 107
Query: 75 MDGRMLDGRELRVQMA 90
M+ ++ GRE+ V +A
Sbjct: 108 MNRQIFAGREISVVVA 123
>gi|296232406|ref|XP_002761576.1| PREDICTED: cold-inducible RNA-binding protein [Callithrix jacchus]
Length = 172
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 58/88 (65%), Gaps = 3/88 (3%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L V L++ T L +VF + G++ ++ + +DR T+ SRGF FV F + DA+DA+ AM
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 76 DGRMLDGRELRVQMARYGRPPSSSRSRG 103
+G+ +DGR++RV A G+ P SRSRG
Sbjct: 68 NGKSVDGRQIRVDQA--GKSP-DSRSRG 92
>gi|285808363|gb|ADC35892.1| RNP-1 like RNA-binding protein [uncultured bacterium 246]
Length = 104
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 60/109 (55%), Gaps = 5/109 (4%)
Query: 13 MVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDAL 72
M ++ V N++++TT +LR FE GE+ I I DR T ++RGFAFV + DA A+
Sbjct: 1 MRNVFVGNMSFQTTEGELRAAFETYGEIARIQIMTDRDTGQARGFAFVEMTNDEDAAKAI 60
Query: 73 DAMDGRMLDGRELRVQMARYGRPPSSSRSRGGRDRDRRRDRSRSRDRRY 121
++G LDGR L V A+ P +RGG DR SR R RY
Sbjct: 61 AGLNGTQLDGRALNVNEAK--PKPQGGGARGGNDRG---GYSRDRGSRY 104
>gi|354485618|ref|XP_003504980.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Cricetulus
griseus]
Length = 172
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 55/80 (68%), Gaps = 1/80 (1%)
Query: 28 DDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAMDGRMLDGRELRV 87
+DLRR F R G + D+Y+P D +TR RGFA+V+F D RDAEDAL +D + + GR++ +
Sbjct: 13 EDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEI 72
Query: 88 QMARYGR-PPSSSRSRGGRD 106
Q A+ R P+ +++ GR+
Sbjct: 73 QFAQGDRKTPNQMKAKEGRN 92
>gi|338721847|ref|XP_001504243.3| PREDICTED: serine/arginine-rich splicing factor 10 [Equus caballus]
Length = 153
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 55/80 (68%), Gaps = 1/80 (1%)
Query: 28 DDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAMDGRMLDGRELRV 87
+DLRR F R G + D+Y+P D +TR RGFA+V+F D RDAEDAL +D + + GR++ +
Sbjct: 4 EDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEI 63
Query: 88 QMARYGR-PPSSSRSRGGRD 106
Q A+ R P+ +++ GR+
Sbjct: 64 QFAQGDRKTPNQMKAKEGRN 83
>gi|442761097|gb|JAA72707.1| Putative splicing factor sc35, partial [Ixodes ricinus]
Length = 226
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 55/89 (61%), Gaps = 5/89 (5%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRF 62
Y RPP SL + N+ T P+DLR +F + G + D+YIP D + R RGFA+V+F
Sbjct: 26 YSRPP-----NSSLFIRNVPDGTRPEDLRSLFGKYGPITDVYIPVDYYARRPRGFAYVQF 80
Query: 63 FDKRDAEDALDAMDGRMLDGRELRVQMAR 91
D RDAEDA+ ++D GREL ++ A+
Sbjct: 81 EDLRDAEDAMYSLDRTRFYGRELEIEFAQ 109
>gi|325181594|emb|CCA16044.1| conserved hypothetical protein [Albugo laibachii Nc14]
gi|325191994|emb|CCA26461.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 236
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 52/77 (67%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
+L V NL +R T ++LR++FE+ G + I D +RESRGFAFV F D RDA DA+
Sbjct: 75 NLYVANLAHRVTDEELRQLFEKFGRLEKCEIIIDPISRESRGFAFVTFEDVRDASDAVQE 134
Query: 75 MDGRMLDGRELRVQMAR 91
++G+ + GR +RV+ A+
Sbjct: 135 LNGKDIQGRRMRVEHAK 151
>gi|119589927|gb|EAW69521.1| cold inducible RNA binding protein, isoform CRA_b [Homo sapiens]
Length = 184
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 62/107 (57%), Gaps = 7/107 (6%)
Query: 1 MSYGRPPPRIEGMVS----LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRG 56
M++G M S L V L++ T L +VF + G++ ++ + +DR T+ SRG
Sbjct: 1 MTWGTREEEQAAMASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRG 60
Query: 57 FAFVRFFDKRDAEDALDAMDGRMLDGRELRVQMARYGRPPSSSRSRG 103
F FV F + DA+DA+ AM+G+ +DGR++RV A S +RSRG
Sbjct: 61 FGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQA---GKSSDNRSRG 104
>gi|24214620|ref|NP_712101.1| RNA-binding protein [Leptospira interrogans serovar Lai str. 56601]
gi|45657838|ref|YP_001924.1| RNA-binding protein [Leptospira interrogans serovar Copenhageni
str. Fiocruz L1-130]
gi|116328465|ref|YP_798185.1| RNA-binding protein [Leptospira borgpetersenii serovar Hardjo-bovis
str. L550]
gi|116331197|ref|YP_800915.1| RNA-binding protein [Leptospira borgpetersenii serovar Hardjo-bovis
str. JB197]
gi|359685806|ref|ZP_09255807.1| RNA-binding protein [Leptospira santarosai str. 2000030832]
gi|359726906|ref|ZP_09265602.1| RNA-binding protein [Leptospira weilii str. 2006001855]
gi|386074008|ref|YP_005988325.1| RNA-binding protein [Leptospira interrogans serovar Lai str. IPAV]
gi|398332637|ref|ZP_10517342.1| RNA-binding protein [Leptospira alexanderi serovar Manhao 3 str. L
60]
gi|410450551|ref|ZP_11304588.1| hypothetical protein LEP1GSC068_2887 [Leptospira sp. Fiocruz
LV3954]
gi|417760452|ref|ZP_12408475.1| hypothetical protein LEP1GSC027_0555 [Leptospira interrogans str.
2002000624]
gi|417765544|ref|ZP_12413504.1| hypothetical protein LEP1GSC007_1775 [Leptospira interrogans
serovar Bulgarica str. Mallika]
gi|417775540|ref|ZP_12423393.1| hypothetical protein LEP1GSC025_3203 [Leptospira interrogans str.
2002000621]
gi|417781669|ref|ZP_12429418.1| hypothetical protein LEP1GSC036_2522 [Leptospira weilii str.
2006001853]
gi|417783687|ref|ZP_12431403.1| hypothetical protein LEP1GSC077_2793 [Leptospira interrogans str.
C10069]
gi|418668620|ref|ZP_13230020.1| hypothetical protein LEP1GSC019_3521 [Leptospira interrogans
serovar Pyrogenes str. 2006006960]
gi|418672853|ref|ZP_13234186.1| hypothetical protein LEP1GSC026_0628 [Leptospira interrogans str.
2002000623]
gi|418684012|ref|ZP_13245203.1| hypothetical protein LEP1GSC045_1894 [Leptospira interrogans
serovar Pomona str. Kennewicki LC82-25]
gi|418693004|ref|ZP_13254073.1| hypothetical protein LEP1GSC080_1903 [Leptospira interrogans str.
FPW2026]
gi|418696158|ref|ZP_13257167.1| hypothetical protein LEP1GSC081_1448 [Leptospira kirschneri str.
H1]
gi|418699596|ref|ZP_13260554.1| hypothetical protein LEP1GSC087_2628 [Leptospira interrogans
serovar Bataviae str. L1111]
gi|418704274|ref|ZP_13265152.1| hypothetical protein LEP1GSC096_2774 [Leptospira interrogans
serovar Hebdomadis str. R499]
gi|418710854|ref|ZP_13271620.1| hypothetical protein LEP1GSC097_1099 [Leptospira interrogans
serovar Grippotyphosa str. UI 08368]
gi|418716814|ref|ZP_13276777.1| hypothetical protein LEP1GSC099_0521 [Leptospira interrogans str.
UI 08452]
gi|418719262|ref|ZP_13278462.1| hypothetical protein LEP1GSC101_3790 [Leptospira borgpetersenii
str. UI 09149]
gi|418726301|ref|ZP_13284912.1| hypothetical protein LEP1GSC104_2204 [Leptospira interrogans str.
UI 12621]
gi|418734639|ref|ZP_13291080.1| hypothetical protein LEP1GSC105_1904 [Leptospira interrogans str.
UI 12758]
gi|418739027|ref|ZP_13295420.1| hypothetical protein LEP1GSC121_3280 [Leptospira borgpetersenii
serovar Castellonis str. 200801910]
gi|418744825|ref|ZP_13301171.1| hypothetical protein LEP1GSC163_4293 [Leptospira santarosai str.
CBC379]
gi|418755775|ref|ZP_13311971.1| hypothetical protein LEP1GSC179_0669 [Leptospira santarosai str.
MOR084]
gi|421084617|ref|ZP_15545475.1| hypothetical protein LEP1GSC173_1895 [Leptospira santarosai str.
HAI1594]
gi|421094388|ref|ZP_15555106.1| hypothetical protein LEP1GSC128_0728 [Leptospira borgpetersenii
str. 200801926]
gi|421100627|ref|ZP_15561250.1| hypothetical protein LEP1GSC125_1674 [Leptospira borgpetersenii
str. 200901122]
gi|421103448|ref|ZP_15564047.1| hypothetical protein LEP1GSC117_3375 [Leptospira interrogans
serovar Icterohaemorrhagiae str. Verdun LP]
gi|421113326|ref|ZP_15573770.1| hypothetical protein LEP1GSC071_0300 [Leptospira santarosai str.
JET]
gi|421118783|ref|ZP_15579118.1| hypothetical protein LEP1GSC069_1297 [Leptospira interrogans
serovar Canicola str. Fiocruz LV133]
gi|421119714|ref|ZP_15580032.1| hypothetical protein LEP1GSC057_2152 [Leptospira interrogans str.
Brem 329]
gi|421126199|ref|ZP_15586437.1| hypothetical protein LEP1GSC020_3724 [Leptospira interrogans
serovar Grippotyphosa str. 2006006986]
gi|421137268|ref|ZP_15597355.1| hypothetical protein LEP1GSC009_1749 [Leptospira interrogans
serovar Grippotyphosa str. Andaman]
gi|422004225|ref|ZP_16351446.1| RNA-binding protein [Leptospira santarosai serovar Shermani str. LT
821]
gi|24195595|gb|AAN49119.1|AE011365_5 RNA-binding protein [Leptospira interrogans serovar Lai str. 56601]
gi|45601078|gb|AAS70561.1| RNA-binding protein [Leptospira interrogans serovar Copenhageni
str. Fiocruz L1-130]
gi|116121209|gb|ABJ79252.1| RNA-binding protein [Leptospira borgpetersenii serovar Hardjo-bovis
str. L550]
gi|116124886|gb|ABJ76157.1| RNA-binding protein [Leptospira borgpetersenii serovar Hardjo-bovis
str. JB197]
gi|353457797|gb|AER02342.1| RNA-binding protein [Leptospira interrogans serovar Lai str. IPAV]
gi|400324233|gb|EJO76531.1| hypothetical protein LEP1GSC045_1894 [Leptospira interrogans
serovar Pomona str. Kennewicki LC82-25]
gi|400352243|gb|EJP04441.1| hypothetical protein LEP1GSC007_1775 [Leptospira interrogans
serovar Bulgarica str. Mallika]
gi|400357111|gb|EJP13258.1| hypothetical protein LEP1GSC080_1903 [Leptospira interrogans str.
FPW2026]
gi|409943682|gb|EKN89276.1| hypothetical protein LEP1GSC027_0555 [Leptospira interrogans str.
2002000624]
gi|409953074|gb|EKO07577.1| hypothetical protein LEP1GSC077_2793 [Leptospira interrogans str.
C10069]
gi|409955687|gb|EKO14619.1| hypothetical protein LEP1GSC081_1448 [Leptospira kirschneri str.
H1]
gi|409960211|gb|EKO23965.1| hypothetical protein LEP1GSC104_2204 [Leptospira interrogans str.
UI 12621]
gi|409963980|gb|EKO31880.1| hypothetical protein LEP1GSC179_0669 [Leptospira santarosai str.
MOR084]
gi|410009807|gb|EKO67963.1| hypothetical protein LEP1GSC069_1297 [Leptospira interrogans
serovar Canicola str. Fiocruz LV133]
gi|410015637|gb|EKO77732.1| hypothetical protein LEP1GSC068_2887 [Leptospira sp. Fiocruz
LV3954]
gi|410018482|gb|EKO85320.1| hypothetical protein LEP1GSC009_1749 [Leptospira interrogans
serovar Grippotyphosa str. Andaman]
gi|410347480|gb|EKO98377.1| hypothetical protein LEP1GSC057_2152 [Leptospira interrogans str.
Brem 329]
gi|410362810|gb|EKP13845.1| hypothetical protein LEP1GSC128_0728 [Leptospira borgpetersenii
str. 200801926]
gi|410366693|gb|EKP22082.1| hypothetical protein LEP1GSC117_3375 [Leptospira interrogans
serovar Icterohaemorrhagiae str. Verdun LP]
gi|410432901|gb|EKP77254.1| hypothetical protein LEP1GSC173_1895 [Leptospira santarosai str.
HAI1594]
gi|410436289|gb|EKP85407.1| hypothetical protein LEP1GSC020_3724 [Leptospira interrogans
serovar Grippotyphosa str. 2006006986]
gi|410574865|gb|EKQ37894.1| hypothetical protein LEP1GSC025_3203 [Leptospira interrogans str.
2002000621]
gi|410580163|gb|EKQ47991.1| hypothetical protein LEP1GSC026_0628 [Leptospira interrogans str.
2002000623]
gi|410744415|gb|EKQ93156.1| hypothetical protein LEP1GSC101_3790 [Leptospira borgpetersenii
str. UI 09149]
gi|410745725|gb|EKQ98635.1| hypothetical protein LEP1GSC121_3280 [Leptospira borgpetersenii
serovar Castellonis str. 200801910]
gi|410755352|gb|EKR16982.1| hypothetical protein LEP1GSC019_3521 [Leptospira interrogans
serovar Pyrogenes str. 2006006960]
gi|410761438|gb|EKR27618.1| hypothetical protein LEP1GSC087_2628 [Leptospira interrogans
serovar Bataviae str. L1111]
gi|410766007|gb|EKR36696.1| hypothetical protein LEP1GSC096_2774 [Leptospira interrogans
serovar Hebdomadis str. R499]
gi|410768454|gb|EKR43701.1| hypothetical protein LEP1GSC097_1099 [Leptospira interrogans
serovar Grippotyphosa str. UI 08368]
gi|410772759|gb|EKR52798.1| hypothetical protein LEP1GSC105_1904 [Leptospira interrogans str.
UI 12758]
gi|410778400|gb|EKR63029.1| hypothetical protein LEP1GSC036_2522 [Leptospira weilii str.
2006001853]
gi|410787585|gb|EKR81317.1| hypothetical protein LEP1GSC099_0521 [Leptospira interrogans str.
UI 08452]
gi|410794311|gb|EKR92220.1| hypothetical protein LEP1GSC163_4293 [Leptospira santarosai str.
CBC379]
gi|410796430|gb|EKR98566.1| hypothetical protein LEP1GSC125_1674 [Leptospira borgpetersenii
str. 200901122]
gi|410801100|gb|EKS07274.1| hypothetical protein LEP1GSC071_0300 [Leptospira santarosai str.
JET]
gi|417257025|gb|EKT86432.1| RNA-binding protein [Leptospira santarosai serovar Shermani str. LT
821]
gi|455666044|gb|EMF31517.1| hypothetical protein LEP1GSC201_1675 [Leptospira interrogans
serovar Pomona str. Fox 32256]
gi|455791968|gb|EMF43753.1| hypothetical protein LEP1GSC067_3245 [Leptospira interrogans
serovar Lora str. TE 1992]
gi|456821541|gb|EMF70047.1| hypothetical protein LEP1GSC148_0536 [Leptospira interrogans
serovar Canicola str. LT1962]
gi|456861145|gb|EMF79850.1| hypothetical protein LEP1GSC188_1846 [Leptospira weilii serovar
Topaz str. LT2116]
gi|456874070|gb|EMF89395.1| hypothetical protein LEP1GSC005_1881 [Leptospira santarosai str.
ST188]
gi|456887997|gb|EMF99005.1| hypothetical protein LEP1GSC123_3441 [Leptospira borgpetersenii
str. 200701203]
Length = 91
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 55/90 (61%), Gaps = 1/90 (1%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
+++ + NL Y+ T DDLR+ FE GEV + I D+ + +SRG AFV +K + A+D
Sbjct: 1 MNIYIGNLAYQATEDDLRKAFESFGEVTSVRIITDKLSGKSRGLAFVEMANKEEGNAAID 60
Query: 74 AMDGRMLDGRELRVQMARYGRP-PSSSRSR 102
++G + GRE++V A +P P SRSR
Sbjct: 61 GLNGTQIRGREIKVNEALPKKPFPEKSRSR 90
>gi|302821717|ref|XP_002992520.1| hypothetical protein SELMODRAFT_47876 [Selaginella
moellendorffii]
gi|300139722|gb|EFJ06458.1| hypothetical protein SELMODRAFT_47876 [Selaginella
moellendorffii]
Length = 125
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 51/77 (66%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
++ V NL + T DL +F + G+VG + + +DR TR+S+G AF+ F + DAE A+ A
Sbjct: 11 TVYVSNLDFSLTNSDLYTIFSKMGKVGKVTVMKDRVTRQSKGVAFILFTAREDAEKAVKA 70
Query: 75 MDGRMLDGRELRVQMAR 91
MDG +L+ R L+V +A+
Sbjct: 71 MDGVVLNKRTLKVSIAQ 87
>gi|62857699|ref|NP_001017228.1| cold-inducible RNA-binding protein [Xenopus (Silurana)
tropicalis]
gi|123910273|sp|Q28IQ9.1|CIRBP_XENTR RecName: Full=Cold-inducible RNA-binding protein; AltName:
Full=Glycine-rich RNA-binding protein CIRP
gi|89268649|emb|CAJ83306.1| cold inducible RNA binding protein [Xenopus (Silurana)
tropicalis]
Length = 166
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 51/75 (68%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L V L + TT + L +VF + G+V ++ + +DR ++ SRGF FV F + DA+DA+ AM
Sbjct: 8 LFVGGLNFETTEESLEQVFSKYGQVAEVVVVKDRESKRSRGFGFVTFENPEDAKDAMMAM 67
Query: 76 DGRMLDGRELRVQMA 90
+G+ +DGR++RV A
Sbjct: 68 NGKSVDGRQIRVDQA 82
>gi|372863947|gb|AEX99749.1| putative serine/arginine-rich protein SCL subfamily member
[Saccharum hybrid cultivar]
Length = 209
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 50/77 (64%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
SL V NL P+DLRR F + G + DIY+PRD +T E RGF FV++++ DA DA
Sbjct: 37 TSLLVRNLRRDCRPEDLRRPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYYEPDDAADAKY 96
Query: 74 AMDGRMLDGRELRVQMA 90
MDG+++ GR++ V A
Sbjct: 97 YMDGQVVLGRQITVVFA 113
>gi|302816982|ref|XP_002990168.1| hypothetical protein SELMODRAFT_7444 [Selaginella moellendorffii]
gi|300142023|gb|EFJ08728.1| hypothetical protein SELMODRAFT_7444 [Selaginella moellendorffii]
Length = 124
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 51/77 (66%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
++ V NL + T DL +F + G+VG + + +DR TR+S+G AF+ F + DAE A+ A
Sbjct: 10 TVYVSNLDFALTNSDLYTIFSKMGKVGKVTVMKDRVTRQSKGVAFILFTAREDAEKAVKA 69
Query: 75 MDGRMLDGRELRVQMAR 91
MDG +L+ R L+V +A+
Sbjct: 70 MDGVVLNKRTLKVSIAQ 86
>gi|260826177|ref|XP_002608042.1| hypothetical protein BRAFLDRAFT_213668 [Branchiostoma floridae]
gi|229293392|gb|EEN64052.1| hypothetical protein BRAFLDRAFT_213668 [Branchiostoma floridae]
Length = 111
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 54/94 (57%), Gaps = 11/94 (11%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR- 61
Y RPP SL V N+ T PD+LR +F + G + D+YIP D FTR RGFA+V+
Sbjct: 4 YSRPP-----NTSLYVRNVPDGTRPDELRSLFGKYGPIVDVYIPLDHFTRHPRGFAYVQY 58
Query: 62 -----FFDKRDAEDALDAMDGRMLDGRELRVQMA 90
F D RDAEDA+ +D GREL +Q A
Sbjct: 59 PFLLTFEDVRDAEDAMYGLDRSRFYGRELEIQFA 92
>gi|159463786|ref|XP_001690123.1| predicted protein [Chlamydomonas reinhardtii]
gi|158284111|gb|EDP09861.1| predicted protein [Chlamydomonas reinhardtii]
Length = 118
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 49/81 (60%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
SL NL+ TT +DLR ER G + DIY+P+D T E RG FV F D +DAE+A
Sbjct: 30 TSLLFRNLSKTTTTEDLRHYAERYGPIRDIYLPKDFQTGEPRGLGFVEFSDPKDAEEARH 89
Query: 74 AMDGRMLDGRELRVQMARYGR 94
MDG + GR + V A++GR
Sbjct: 90 CMDGSTVAGRVISVTFAQHGR 110
>gi|115445337|ref|NP_001046448.1| Os02g0252100 [Oryza sativa Japonica Group]
gi|47497118|dbj|BAD19168.1| putative pre-mRNA splicing factor [Oryza sativa Japonica Group]
gi|47497696|dbj|BAD19762.1| putative pre-mRNA splicing factor [Oryza sativa Japonica Group]
gi|66394215|gb|AAG43284.2| pre-mRNA splicing factor [Oryza sativa]
gi|113535979|dbj|BAF08362.1| Os02g0252100 [Oryza sativa Japonica Group]
gi|215704460|dbj|BAG93894.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 265
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 50/80 (62%)
Query: 11 EGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAED 70
+G SL V N+ +DLR FER G V D+Y+P+D +T E RGFAFV F D DA +
Sbjct: 34 QGSGSLLVRNIPLSCRAEDLRVPFERFGPVRDVYLPKDYYTGEPRGFAFVEFVDPYDASE 93
Query: 71 ALDAMDGRMLDGRELRVQMA 90
A M+ +++ GRE+ V +A
Sbjct: 94 AQYHMNRQVVFGREITVVLA 113
>gi|297816842|ref|XP_002876304.1| hypothetical protein ARALYDRAFT_485973 [Arabidopsis lyrata subsp.
lyrata]
gi|297322142|gb|EFH52563.1| hypothetical protein ARALYDRAFT_485973 [Arabidopsis lyrata subsp.
lyrata]
Length = 260
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 58/100 (58%), Gaps = 6/100 (6%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L V N+ P++LR FER G V D+YIPRD ++ E RGFAFV F D DA +A +M
Sbjct: 48 LLVRNIPLDCRPEELRVPFERFGPVRDVYIPRDYYSGEPRGFAFVEFVDAYDAGEAQRSM 107
Query: 76 DGRMLDGRELRVQMARYGRPPSSSRSRGGRDRDRRRDRSR 115
+ R+ GRE+ V +A S SR R R + R RSR
Sbjct: 108 NRRIFAGREITVVVA------SESRKRPEEMRVKTRTRSR 141
>gi|297789035|ref|XP_002862530.1| hypothetical protein ARALYDRAFT_920582 [Arabidopsis lyrata subsp.
lyrata]
gi|297308107|gb|EFH38788.1| hypothetical protein ARALYDRAFT_920582 [Arabidopsis lyrata subsp.
lyrata]
Length = 116
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 52/73 (71%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKR 66
PP I SL V N+T+RTT DDL +F + G+V D++IPRDR T +SRGFAFVR+ K
Sbjct: 9 PPDISDTYSLLVLNITFRTTADDLYPLFAKYGKVVDVFIPRDRRTGDSRGFAFVRYKYKD 68
Query: 67 DAEDALDAMDGRM 79
+A A++ +DG++
Sbjct: 69 EAHKAVERLDGKI 81
>gi|222622536|gb|EEE56668.1| hypothetical protein OsJ_06104 [Oryza sativa Japonica Group]
Length = 304
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 50/80 (62%)
Query: 11 EGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAED 70
+G SL V N+ +DLR FER G V D+Y+P+D +T E RGFAFV F D DA +
Sbjct: 73 QGSGSLLVRNIPLSCRAEDLRVPFERFGPVRDVYLPKDYYTGEPRGFAFVEFVDPYDASE 132
Query: 71 ALDAMDGRMLDGRELRVQMA 90
A M+ +++ GRE+ V +A
Sbjct: 133 AQYHMNRQVVFGREITVVLA 152
>gi|356517718|ref|XP_003527533.1| PREDICTED: uncharacterized protein LOC100814914 [Glycine max]
Length = 273
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 54/96 (56%), Gaps = 1/96 (1%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
+L V N+ Y T DL +F G V + + +DR TR SRG AFV+F + DA DA
Sbjct: 64 TLYVSNIDYSLTNSDLHTLFSTFGRVARVTVLKDRHTRLSRGVAFVQFVSRHDAHDAAAQ 123
Query: 75 MDGRMLDGRELRVQMAR-YGRPPSSSRSRGGRDRDR 109
MDG++L+GR L +A GR P R R RD DR
Sbjct: 124 MDGKVLNGRTLAASIAADNGRAPEFIRKRVYRDTDR 159
>gi|218190416|gb|EEC72843.1| hypothetical protein OsI_06591 [Oryza sativa Indica Group]
Length = 289
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 50/80 (62%)
Query: 11 EGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAED 70
+G SL V N+ +DLR FER G V D+Y+P+D +T E RGFAFV F D DA +
Sbjct: 58 QGSGSLLVRNIPLSCRAEDLRVPFERFGPVRDVYLPKDYYTGEPRGFAFVEFVDPYDASE 117
Query: 71 ALDAMDGRMLDGRELRVQMA 90
A M+ +++ GRE+ V +A
Sbjct: 118 AQYHMNRQVVFGREITVVLA 137
>gi|426222784|ref|XP_004005562.1| PREDICTED: serine/arginine-rich splicing factor 10 [Ovis aries]
Length = 225
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 55/80 (68%), Gaps = 1/80 (1%)
Query: 28 DDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAMDGRMLDGRELRV 87
+DLRR F R G + D+Y+P D +TR RGFA+V+F D RDAEDAL +D + + GR++ +
Sbjct: 66 EDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEI 125
Query: 88 QMARYGR-PPSSSRSRGGRD 106
Q A+ R P+ +++ GR+
Sbjct: 126 QFAQGDRKTPNQMKAKEGRN 145
>gi|326933179|ref|XP_003212685.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Meleagris
gallopavo]
Length = 278
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 55/80 (68%), Gaps = 1/80 (1%)
Query: 28 DDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAMDGRMLDGRELRV 87
+DLRR F R G + D+Y+P D +TR RGFA+V+F D RDAEDAL +D + + GR++ +
Sbjct: 99 EDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEI 158
Query: 88 QMARYGR-PPSSSRSRGGRD 106
Q A+ R P+ +++ GR+
Sbjct: 159 QFAQGDRKTPNQMKAKEGRN 178
>gi|555924|gb|AAA64595.1| putative myelin regulatory factor 1; MRF-1, partial [Mus musculus]
Length = 283
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 33/43 (76%), Positives = 36/43 (83%)
Query: 59 FVRFFDKRDAEDALDAMDGRMLDGRELRVQMARYGRPPSSSRS 101
FVRF DK AEDA+DAMDG +LDGRELRVQ+ARYGRPP S S
Sbjct: 115 FVRFHDKPHAEDAMDAMDGAVLDGRELRVQLARYGRPPDSHHS 157
>gi|383763833|ref|YP_005442815.1| putative RNA-binding region [Caldilinea aerophila DSM 14535 = NBRC
104270]
gi|381384101|dbj|BAM00918.1| putative RNA-binding region [Caldilinea aerophila DSM 14535 = NBRC
104270]
Length = 105
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 65/107 (60%), Gaps = 4/107 (3%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
+++ V NL+YRTT D+LRR FE G V I RDR + +S+GF FV +A A++
Sbjct: 1 MNIYVGNLSYRTTEDELRRTFEAYGAVSSASIIRDRESGQSKGFGFVEMPSDSEALAAIN 60
Query: 74 AMDGRMLDGRELRVQMARYGRPPSSSRSRGGRDRDR-RRDRSRSRDR 119
A++ + + GR L+V A RP S RGGR + R R D++R R+R
Sbjct: 61 ALNDKEVGGRRLKVNQA---RPREESGPRGGRPQSRPRSDQNRDRNR 104
>gi|255551589|ref|XP_002516840.1| serine/arginine rich splicing factor, putative [Ricinus communis]
gi|223543928|gb|EEF45454.1| serine/arginine rich splicing factor, putative [Ricinus communis]
Length = 257
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 68/136 (50%), Gaps = 4/136 (2%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L V NL P+DLR FE+ G V D+Y+P++ +T E RGF FV++ DA +A M
Sbjct: 54 LLVRNLPLDARPEDLRGPFEKYGPVKDVYLPKNYYTGEPRGFGFVKYRYAEDAAEAKQRM 113
Query: 76 DGRMLDGRELRVQMARYGRPPSSSRSRGGRDRDRRRDRSRSRDRRYTRSRSFSSRSRSGS 135
+ +++ GRE+R+ A R R R +R R T +S R RS S
Sbjct: 114 NHKIIGGREIRIVYAEENRKTPQEMRTTARVSGRHGGSTRGR----TPPKSPRRRHRSYS 169
Query: 136 KSPRKARSKSIDRDNK 151
SP AR S DR K
Sbjct: 170 HSPSSARHDSRDRGAK 185
>gi|351699548|gb|EHB02467.1| Cold-inducible RNA-binding protein, partial [Heterocephalus glaber]
Length = 167
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 56/88 (63%), Gaps = 3/88 (3%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L V L++ T L +VF + G++ ++ + +DR T+ SRGF FV F + DA+DA+ AM
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 76 DGRMLDGRELRVQMARYGRPPSSSRSRG 103
+G+ +DGR++RV A S SRSRG
Sbjct: 68 NGKSVDGRQIRVDQA---GKSSDSRSRG 92
>gi|156376506|ref|XP_001630401.1| predicted protein [Nematostella vectensis]
gi|156217421|gb|EDO38338.1| predicted protein [Nematostella vectensis]
Length = 215
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 65/110 (59%), Gaps = 5/110 (4%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MS G P + ++ V NL Y T DL +VFER G+V + I RD+ TRESRG AF+
Sbjct: 1 MSGGLAPSK----STVYVGNLPYSLTNSDLHKVFERYGKVVKVTILRDKETRESRGVAFI 56
Query: 61 RFFDKRDAEDALDAMDGRMLDGRELRVQMAR-YGRPPSSSRSRGGRDRDR 109
F D++ A++A+ A++ + + GR ++ +A+ GR P R R D+ R
Sbjct: 57 LFIDRQSAQNAVAAVNKKQMFGRTIKCTIAKDNGRAPEFIRRRDYPDKSR 106
>gi|357492235|ref|XP_003616406.1| Splicing factor, arginine/serine-rich 13A [Medicago truncatula]
gi|355517741|gb|AES99364.1| Splicing factor, arginine/serine-rich 13A [Medicago truncatula]
Length = 286
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 49/76 (64%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
SL V N+ P++LR FER G V D+YIP+D ++ + RGFAFV+F D +A +A
Sbjct: 48 SLLVRNIPLDCRPEELRAPFERFGPVRDVYIPKDYYSGQPRGFAFVQFVDAYEASEAQYH 107
Query: 75 MDGRMLDGRELRVQMA 90
MD ++ GRE+ V +A
Sbjct: 108 MDRQIFAGREISVVVA 123
>gi|398337153|ref|ZP_10521858.1| RNA-binding protein [Leptospira kmetyi serovar Malaysia str.
Bejo-Iso9]
gi|398339344|ref|ZP_10524047.1| RNA-binding protein [Leptospira kirschneri serovar Bim str. 1051]
gi|418679408|ref|ZP_13240671.1| hypothetical protein LEP1GSC044_2501 [Leptospira kirschneri serovar
Grippotyphosa str. RM52]
gi|418686673|ref|ZP_13247838.1| hypothetical protein LEP1GSC064_2382 [Leptospira kirschneri serovar
Grippotyphosa str. Moskva]
gi|418742090|ref|ZP_13298463.1| hypothetical protein LEP1GSC122_3008 [Leptospira kirschneri serovar
Valbuzzi str. 200702274]
gi|421090342|ref|ZP_15551136.1| hypothetical protein LEP1GSC131_0332 [Leptospira kirschneri str.
200802841]
gi|421107449|ref|ZP_15568001.1| hypothetical protein LEP1GSC082_3004 [Leptospira kirschneri str.
H2]
gi|421132619|ref|ZP_15592785.1| hypothetical protein LEP1GSC018_3276 [Leptospira kirschneri str.
2008720114]
gi|400320299|gb|EJO68170.1| hypothetical protein LEP1GSC044_2501 [Leptospira kirschneri serovar
Grippotyphosa str. RM52]
gi|410000920|gb|EKO51546.1| hypothetical protein LEP1GSC131_0332 [Leptospira kirschneri str.
200802841]
gi|410007465|gb|EKO61175.1| hypothetical protein LEP1GSC082_3004 [Leptospira kirschneri str.
H2]
gi|410356002|gb|EKP03377.1| hypothetical protein LEP1GSC018_3276 [Leptospira kirschneri str.
2008720114]
gi|410738744|gb|EKQ83477.1| hypothetical protein LEP1GSC064_2382 [Leptospira kirschneri serovar
Grippotyphosa str. Moskva]
gi|410750448|gb|EKR07428.1| hypothetical protein LEP1GSC122_3008 [Leptospira kirschneri serovar
Valbuzzi str. 200702274]
Length = 91
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 55/90 (61%), Gaps = 1/90 (1%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
+++ + NL Y+ T DDLR+ FE GEV + I D+ + +SRG AFV +K + A+D
Sbjct: 1 MNIYIGNLAYQATEDDLRKAFESFGEVTSVRIITDKLSGKSRGLAFVEMANKDEGNAAID 60
Query: 74 AMDGRMLDGRELRVQMARYGRP-PSSSRSR 102
++G + GRE++V A +P P SRSR
Sbjct: 61 GLNGTQIRGREIKVNEALPKKPFPEKSRSR 90
>gi|253760757|ref|XP_002489004.1| hypothetical protein SORBIDRAFT_0514s002010 [Sorghum bicolor]
gi|241947359|gb|EES20504.1| hypothetical protein SORBIDRAFT_0514s002010 [Sorghum bicolor]
Length = 208
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 58/106 (54%), Gaps = 6/106 (5%)
Query: 11 EGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAED 70
EG SL V N+ ++LR FER G V D+YIP+D ++ E RGFAFV F D DA +
Sbjct: 88 EGSGSLLVRNIPLSVRAEELRVPFERFGPVRDVYIPKDYYSGEPRGFAFVEFVDPYDASE 147
Query: 71 ALDAMDGRMLDGRELRVQMARYGRPPSSSRSRGGRDRDRRRDRSRS 116
A M+ ++ GRE+ V +A + SR R R R R R S
Sbjct: 148 AQYHMNRQVFFGREIAVVLA------AESRKRPEEMRSRARVRGYS 187
>gi|209527224|ref|ZP_03275736.1| RNP-1 like RNA-binding protein [Arthrospira maxima CS-328]
gi|376003288|ref|ZP_09781101.1| Glycine-rich RNA-binding protein, rbp-like [Arthrospira sp. PCC
8005]
gi|209492382|gb|EDZ92725.1| RNP-1 like RNA-binding protein [Arthrospira maxima CS-328]
gi|375328318|emb|CCE16854.1| Glycine-rich RNA-binding protein, rbp-like [Arthrospira sp. PCC
8005]
Length = 93
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 55/95 (57%), Gaps = 3/95 (3%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
+S+ V NL+Y TPDDL VF + G V IP DR T SRGF FV ++ + A++
Sbjct: 1 MSIYVGNLSYDVTPDDLSEVFAQYGTVKRSMIPTDRETGRSRGFGFVEMVNEDEETKAIE 60
Query: 74 AMDGRMLDGRELRVQMARYGRPPSSSRSRGGRDRD 108
A+DG GR L+V A RP +++ RGG RD
Sbjct: 61 ALDGAEWMGRSLKVNKA---RPRENNKQRGGFKRD 92
>gi|448878352|gb|AGE46139.1| arginine/serine-rich splicing factor SCL25B transcript IV [Sorghum
bicolor]
Length = 174
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 50/77 (64%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
SL V NL P+DLRR F + G + DIY+PRD +T E RGF FV+++D DA DA
Sbjct: 37 TSLLVRNLRRDCRPEDLRRPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYYDPDDAADAKY 96
Query: 74 AMDGRMLDGRELRVQMA 90
MDG+++ GR++ V A
Sbjct: 97 YMDGQVVLGRQITVVFA 113
>gi|7076789|emb|CAB75904.1| putative RNA binding protein [Arabidopsis thaliana]
Length = 309
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 63/112 (56%), Gaps = 10/112 (8%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L V N+ P++LR FER G V D+YIPRD ++ + RGFAFV F D DA +A +M
Sbjct: 49 LLVRNIPLDCRPEELREPFERFGPVRDVYIPRDYYSGQPRGFAFVEFVDAYDAGEAQRSM 108
Query: 76 DGRMLDGRELRVQMARYGRPPSSSRSRGGRDRDRRRDRSR----SRDRRYTR 123
+ R GRE+ V +A S SR R R + R RSR SRDR + +
Sbjct: 109 NRRSFAGREITVVVA------SESRKRPEEMRVKTRTRSREPSGSRDRSHAK 154
>gi|82541600|ref|XP_725030.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23479883|gb|EAA16595.1| PR264 [Plasmodium yoelii yoelii]
Length = 121
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 51/81 (62%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
+SL + L + T+P +R F++ G + D+Y+P D +T+E RGF FV F+D +DA +AL
Sbjct: 12 MSLLIRKLKFNTSPSMVRDKFKKFGAIKDVYLPIDYYTKEPRGFGFVEFYDPKDAXEALK 71
Query: 74 AMDGRMLDGRELRVQMARYGR 94
M+G L + V +A+ GR
Sbjct: 72 EMNGXELXXNRIEVFVAQKGR 92
>gi|357160417|ref|XP_003578758.1| PREDICTED: uncharacterized protein LOC100826288 [Brachypodium
distachyon]
Length = 295
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 49/80 (61%)
Query: 11 EGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAED 70
+G SL V N+ +DLR FER G V D+Y+P+D ++ E RGFAFV F D DA +
Sbjct: 62 QGSGSLLVRNIPLSARAEDLRVPFERFGPVRDVYLPKDYYSGEPRGFAFVEFVDPYDASE 121
Query: 71 ALDAMDGRMLDGRELRVQMA 90
A M+ ++ GRE+ V +A
Sbjct: 122 AQYHMNRQVFFGREITVVLA 141
>gi|399216355|emb|CCF73043.1| unnamed protein product [Babesia microti strain RI]
Length = 298
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 82/162 (50%), Gaps = 30/162 (18%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
S+ V NL TTP+ +R FE+ GE+ D+Y+P D FT + RGF FV F+ A++A+
Sbjct: 8 YSVLVRNLLETTTPELVRETFEKFGEIRDVYLPTDFFTHKPRGFGFVEFYKLESAKEAVK 67
Query: 74 AMDGRMLDGRELRVQMARYGR--PPS----SSRSRG---------------GRDRDR--R 110
MD + +DG + V A+ R P S SSR++G GR R+R
Sbjct: 68 EMDNKTIDGATVSVTPAQDRRKSPESMRRFSSRNQGSHIPYGKSHDGRPMEGRARERPDW 127
Query: 111 RDRSRSRDRRYTRSRSFSSRSRSGSKSPRKARSKSIDRDNKH 152
RD ++ D Y R F S RS RS S+DR N++
Sbjct: 128 RDHPQNYDSHYNRRDRFESYYRS-------PRSLSMDRYNRY 162
>gi|71668509|gb|AAZ38826.1| aggrecan promoter binding protein [Gallus gallus]
Length = 172
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 56/88 (63%), Gaps = 3/88 (3%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L V L++ T L +VF + G++ ++ + +DR T+ SRGF FV F + DA+DA+ AM
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 76 DGRMLDGRELRVQMARYGRPPSSSRSRG 103
+G+ +DGR++RV A S +RSRG
Sbjct: 68 NGKSVDGRQIRVDQA---GKSSENRSRG 92
>gi|326918654|ref|XP_003205603.1| PREDICTED: LOW QUALITY PROTEIN: cold-inducible RNA-binding
protein-like [Meleagris gallopavo]
Length = 170
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 56/88 (63%), Gaps = 3/88 (3%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L V L++ T L +VF + G++ ++ + +DR T+ SRGF FV F + DA+DA+ AM
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 76 DGRMLDGRELRVQMARYGRPPSSSRSRG 103
+G+ +DGR++RV A S +RSRG
Sbjct: 68 NGKSVDGRQIRVDQA---GKSSENRSRG 92
>gi|410949903|ref|XP_003981656.1| PREDICTED: cold-inducible RNA-binding protein [Felis catus]
Length = 172
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 56/88 (63%), Gaps = 3/88 (3%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L V L++ T L +VF + G++ ++ + +DR T+ SRGF FV F + DA+DA+ AM
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQIAEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 76 DGRMLDGRELRVQMARYGRPPSSSRSRG 103
+G+ +DGR++RV A S +RSRG
Sbjct: 68 NGKSVDGRQIRVDQA---GKSSDNRSRG 92
>gi|402903547|ref|XP_003914625.1| PREDICTED: cold-inducible RNA-binding protein [Papio anubis]
Length = 199
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 56/88 (63%), Gaps = 3/88 (3%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L V L++ T L +VF + G++ ++ + +DR T+ SRGF FV F + DA+DA+ AM
Sbjct: 35 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 94
Query: 76 DGRMLDGRELRVQMARYGRPPSSSRSRG 103
+G+ +DGR++RV A S +RSRG
Sbjct: 95 NGKSVDGRQIRVDQA---GKSSDNRSRG 119
>gi|193215305|ref|YP_001996504.1| RNP-1 like RNA-binding protein [Chloroherpeton thalassium ATCC
35110]
gi|193088782|gb|ACF14057.1| RNP-1 like RNA-binding protein [Chloroherpeton thalassium ATCC
35110]
Length = 104
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 56/89 (62%), Gaps = 3/89 (3%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
+++ V NL+Y T ++LR VF GEV I D+++ +SRGF FV ++ DAE A++
Sbjct: 1 MNIYVGNLSYTLTENELRDVFSEYGEVASANIIVDKYSGKSRGFGFVDMPNEADAEQAIE 60
Query: 74 AMDGRMLDGRELRVQMARYGRPPSSSRSR 102
A++G LDGR L+V A RP S+ RS
Sbjct: 61 ALNGSQLDGRSLKVNEA---RPRSNDRSE 86
>gi|350538255|ref|NP_001232562.1| putative cold inducible RNA binding protein variant 1 [Taeniopygia
guttata]
gi|197128621|gb|ACH45119.1| putative cold inducible RNA binding protein variant 1 [Taeniopygia
guttata]
Length = 171
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 56/88 (63%), Gaps = 3/88 (3%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L V L++ T L +VF + G++ ++ + +DR T+ SRGF FV F + DA+DA+ AM
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 76 DGRMLDGRELRVQMARYGRPPSSSRSRG 103
+G+ +DGR++RV A S +RSRG
Sbjct: 68 NGKSVDGRQIRVDQA---GKSSENRSRG 92
>gi|118484981|gb|ABK94355.1| unknown [Populus trichocarpa]
Length = 252
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/136 (38%), Positives = 68/136 (50%), Gaps = 4/136 (2%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L + NL P+DLR FE+ G + DIY+P++ T E RGF FV++ DA +A M
Sbjct: 50 LLIRNLPLDARPEDLRGPFEKFGPLKDIYLPKNYHTGEPRGFGFVKYRYGEDAAEAKKRM 109
Query: 76 DGRMLDGRELRVQMARYGRPPSSSRSRGGRDRDRRRDRSRSRDRRYTRSRSFSSRSRSGS 135
D +++ GRE+R+ A R R R DR R T RS R RS S
Sbjct: 110 DHKIIGGREIRIVFAEENRKTPQEMRRTPRTSDRHGGSHGGR----TPPRSPRHRYRSYS 165
Query: 136 KSPRKARSKSIDRDNK 151
+SP AR S DR K
Sbjct: 166 RSPSPARHDSRDRGVK 181
>gi|4502847|ref|NP_001271.1| cold-inducible RNA-binding protein [Homo sapiens]
gi|197102572|ref|NP_001124692.1| cold-inducible RNA-binding protein [Pongo abelii]
gi|386782231|ref|NP_001248245.1| cold-inducible RNA-binding protein [Macaca mulatta]
gi|397465267|ref|XP_003804430.1| PREDICTED: cold-inducible RNA-binding protein [Pan paniscus]
gi|426386441|ref|XP_004059693.1| PREDICTED: cold-inducible RNA-binding protein isoform 1 [Gorilla
gorilla gorilla]
gi|5921786|sp|Q14011.1|CIRBP_HUMAN RecName: Full=Cold-inducible RNA-binding protein; AltName: Full=A18
hnRNP; AltName: Full=Glycine-rich RNA-binding protein
CIRP
gi|75070980|sp|Q5RF83.1|CIRBP_PONAB RecName: Full=Cold-inducible RNA-binding protein; AltName:
Full=Glycine-rich RNA-binding protein CIRP
gi|1060893|dbj|BAA11212.1| CIRP [Homo sapiens]
gi|2541973|gb|AAC51787.1| DNA damage-inducible RNA binding protein [Homo sapiens]
gi|2924760|gb|AAC04895.1| CIRP [Homo sapiens]
gi|12653269|gb|AAH00403.1| Cold inducible RNA binding protein [Homo sapiens]
gi|12654167|gb|AAH00901.1| Cold inducible RNA binding protein [Homo sapiens]
gi|30583259|gb|AAP35874.1| cold inducible RNA binding protein [Homo sapiens]
gi|55725420|emb|CAH89574.1| hypothetical protein [Pongo abelii]
gi|60654971|gb|AAX32049.1| cold inducible RNA binding protein [synthetic construct]
gi|67970531|dbj|BAE01608.1| unnamed protein product [Macaca fascicularis]
gi|119589926|gb|EAW69520.1| cold inducible RNA binding protein, isoform CRA_a [Homo sapiens]
gi|119589929|gb|EAW69523.1| cold inducible RNA binding protein, isoform CRA_a [Homo sapiens]
gi|157928054|gb|ABW03323.1| cold inducible RNA binding protein [synthetic construct]
gi|157928769|gb|ABW03670.1| cold inducible RNA binding protein [synthetic construct]
gi|197692151|dbj|BAG70039.1| cold inducible RNA binding protein [Homo sapiens]
gi|197692397|dbj|BAG70162.1| cold inducible RNA binding protein [Homo sapiens]
gi|261860266|dbj|BAI46655.1| cold inducible RNA binding protein [synthetic construct]
gi|343958578|dbj|BAK63144.1| cold-inducible RNA-binding protein [Pan troglodytes]
gi|383415637|gb|AFH31032.1| cold-inducible RNA-binding protein [Macaca mulatta]
gi|384940732|gb|AFI33971.1| cold-inducible RNA-binding protein [Macaca mulatta]
gi|410224774|gb|JAA09606.1| cold inducible RNA binding protein [Pan troglodytes]
gi|410260066|gb|JAA17999.1| cold inducible RNA binding protein [Pan troglodytes]
gi|410289136|gb|JAA23168.1| cold inducible RNA binding protein [Pan troglodytes]
gi|410343217|gb|JAA40555.1| cold inducible RNA binding protein [Pan troglodytes]
gi|410343219|gb|JAA40556.1| cold inducible RNA binding protein [Pan troglodytes]
gi|410343223|gb|JAA40558.1| cold inducible RNA binding protein [Pan troglodytes]
Length = 172
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 56/88 (63%), Gaps = 3/88 (3%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L V L++ T L +VF + G++ ++ + +DR T+ SRGF FV F + DA+DA+ AM
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 76 DGRMLDGRELRVQMARYGRPPSSSRSRG 103
+G+ +DGR++RV A S +RSRG
Sbjct: 68 NGKSVDGRQIRVDQA---GKSSDNRSRG 92
>gi|166365958|ref|YP_001658231.1| RNA binding protein [Microcystis aeruginosa NIES-843]
gi|425466552|ref|ZP_18845850.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9809]
gi|166088331|dbj|BAG03039.1| RNA binding protein [Microcystis aeruginosa NIES-843]
gi|389830907|emb|CCI26790.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9809]
Length = 98
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 55/97 (56%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
+S+ V NL + DD+ VF+ GE+ +++P DR T+ RGFAFV A+
Sbjct: 1 MSIYVGNLPFEVDQDDVVEVFKEYGEIKRVHLPMDRETKRKRGFAFVEMETPEQEAKAIA 60
Query: 74 AMDGRMLDGRELRVQMARYGRPPSSSRSRGGRDRDRR 110
A+DG GREL+V AR P SS + G R+R+RR
Sbjct: 61 ALDGAQWMGRELKVNQAREKEPRSSFGAGGDRNRERR 97
>gi|161408091|dbj|BAF94149.1| cold-inducible RNA binding protein [Alligator mississippiensis]
Length = 165
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 56/88 (63%), Gaps = 3/88 (3%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L V L++ T L +VF + G++ ++ + +DR T+ SRGF FV F + DA+DA+ AM
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 76 DGRMLDGRELRVQMARYGRPPSSSRSRG 103
+G+ +DGR++RV A S +RSRG
Sbjct: 68 NGKSVDGRQIRVDQA---GKSSENRSRG 92
>gi|197128626|gb|ACH45124.1| putative cold inducible RNA binding protein variant 1 [Taeniopygia
guttata]
Length = 171
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 56/88 (63%), Gaps = 3/88 (3%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L V L++ T L +VF + G++ ++ + +DR T+ SRGF FV F + DA+DA+ AM
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 76 DGRMLDGRELRVQMARYGRPPSSSRSRG 103
+G+ +DGR++RV A S +RSRG
Sbjct: 68 NGKSVDGRQIRVDQA---GKSSENRSRG 92
>gi|426229493|ref|XP_004008825.1| PREDICTED: cold-inducible RNA-binding protein [Ovis aries]
Length = 171
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 56/88 (63%), Gaps = 3/88 (3%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L V L++ T L +VF + G++ ++ + +DR T+ SRGF FV F + DA+DA+ AM
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 76 DGRMLDGRELRVQMARYGRPPSSSRSRG 103
+G+ +DGR++RV A S +RSRG
Sbjct: 68 NGKSVDGRQIRVDQA---GKSSDNRSRG 92
>gi|30585341|gb|AAP36943.1| Homo sapiens cold inducible RNA binding protein [synthetic
construct]
gi|61371531|gb|AAX43684.1| cold inducible RNA binding protein [synthetic construct]
gi|61371536|gb|AAX43685.1| cold inducible RNA binding protein [synthetic construct]
Length = 173
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 56/88 (63%), Gaps = 3/88 (3%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L V L++ T L +VF + G++ ++ + +DR T+ SRGF FV F + DA+DA+ AM
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 76 DGRMLDGRELRVQMARYGRPPSSSRSRG 103
+G+ +DGR++RV A S +RSRG
Sbjct: 68 NGKSVDGRQIRVDQA---GKSSDNRSRG 92
>gi|115486805|ref|NP_001068546.1| Os11g0704700 [Oryza sativa Japonica Group]
gi|62733154|gb|AAX95271.1| RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain), putative
[Oryza sativa Japonica Group]
gi|77552711|gb|ABA95508.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113645768|dbj|BAF28909.1| Os11g0704700 [Oryza sativa Japonica Group]
Length = 502
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 46/79 (58%)
Query: 12 GMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDA 71
VSL V NL P+D++ F++ G V D+Y+P+D T E RGFAFV F DA A
Sbjct: 33 AAVSLFVSNLPRSCRPEDVQVPFQKFGPVRDVYLPKDYNTGEPRGFAFVEFAHSSDASKA 92
Query: 72 LDAMDGRMLDGRELRVQMA 90
M+ +ML GRE+ V A
Sbjct: 93 RYHMNRKMLSGREISVAFA 111
>gi|20975278|dbj|BAB92956.1| cold inducible RNA-binding protein beta [Hyla japonica]
Length = 166
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 52/75 (69%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L V L++ T +L +VF + G++ ++ + +DR T+ SRGF FV F + DA+DA++AM
Sbjct: 9 LFVGGLSFDTEEQNLEQVFGKYGQISEVVVVKDRETQRSRGFGFVTFENPEDAKDAMEAM 68
Query: 76 DGRMLDGRELRVQMA 90
+G+ +DGR++RV A
Sbjct: 69 NGKSVDGRQIRVDQA 83
>gi|9843657|emb|CAC03602.1| SC35-like splicing factor SCL30, 30 kD [Arabidopsis thaliana]
Length = 262
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/100 (44%), Positives = 57/100 (57%), Gaps = 6/100 (6%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L V N+ P++LR FER G V D+YIPRD ++ + RGFAFV F D DA +A +M
Sbjct: 49 LLVRNIPLDCRPEELREPFERFGPVRDVYIPRDYYSGQPRGFAFVEFVDAYDAGEAQRSM 108
Query: 76 DGRMLDGRELRVQMARYGRPPSSSRSRGGRDRDRRRDRSR 115
+ R GRE+ V +A S SR R R + R RSR
Sbjct: 109 NRRSFSGREITVVVA------SESRKRPEEMRVKTRTRSR 142
>gi|115489208|ref|NP_001067091.1| Os12g0572400 [Oryza sativa Japonica Group]
gi|77556878|gb|ABA99674.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113649598|dbj|BAF30110.1| Os12g0572400 [Oryza sativa Japonica Group]
gi|215694562|dbj|BAG89555.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222617335|gb|EEE53467.1| hypothetical protein OsJ_36595 [Oryza sativa Japonica Group]
Length = 263
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 50/82 (60%)
Query: 9 RIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDA 68
R +G SL V N+ +DLR FER G V D+Y+P+D ++ E RGFAFV F D DA
Sbjct: 32 REQGSGSLLVRNIPLSCRGEDLRVPFERFGPVRDVYLPKDYYSGEPRGFAFVEFVDPYDA 91
Query: 69 EDALDAMDGRMLDGRELRVQMA 90
+A M+ ++ GRE+ V +A
Sbjct: 92 SEAQYHMNRQVFFGREITVVLA 113
>gi|301776322|ref|XP_002923559.1| PREDICTED: cold-inducible RNA-binding protein-like [Ailuropoda
melanoleuca]
Length = 172
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 56/88 (63%), Gaps = 3/88 (3%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L V L++ T L +VF + G++ ++ + +DR T+ SRGF FV F + DA+DA+ AM
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 76 DGRMLDGRELRVQMARYGRPPSSSRSRG 103
+G+ +DGR++RV A S +RSRG
Sbjct: 68 NGKSVDGRQIRVDQA---GKSSDNRSRG 92
>gi|90077754|dbj|BAE88557.1| unnamed protein product [Macaca fascicularis]
Length = 172
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 56/88 (63%), Gaps = 3/88 (3%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L V L++ T L +VF + G++ ++ + +DR T+ SRGF FV F + DA+DA+ AM
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 76 DGRMLDGRELRVQMARYGRPPSSSRSRG 103
+G+ +DGR++RV A S +RSRG
Sbjct: 68 NGKSVDGRQIRVDQA---GKSSDNRSRG 92
>gi|260814928|ref|XP_002602165.1| hypothetical protein BRAFLDRAFT_268357 [Branchiostoma floridae]
gi|229287472|gb|EEN58177.1| hypothetical protein BRAFLDRAFT_268357 [Branchiostoma floridae]
Length = 224
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 56/91 (61%), Gaps = 4/91 (4%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MS G P + ++ V NL + T +DL ++FE+ G+V + + RD+ TR+S+G AFV
Sbjct: 1 MSGGLAPSK----TTVYVSNLPFALTNNDLHKIFEKYGKVVKVTVMRDKITRQSKGVAFV 56
Query: 61 RFFDKRDAEDALDAMDGRMLDGRELRVQMAR 91
F + +A + A++G++L GR ++ MA+
Sbjct: 57 LFLKREEAHACVRALNGKVLFGRTVKCSMAK 87
>gi|241812106|ref|XP_002414600.1| splicing factor SC35, putative [Ixodes scapularis]
gi|215508811|gb|EEC18265.1| splicing factor SC35, putative [Ixodes scapularis]
Length = 221
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 62/108 (57%), Gaps = 5/108 (4%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MS G P + ++ V NL Y+ T +DL ++FE+ G+V + + +D+ T +S+G AFV
Sbjct: 1 MSAGLTPSK----STVYVSNLPYKLTNNDLHQLFEKYGKVAKVTVMKDKQTWKSKGVAFV 56
Query: 61 RFFDKRDAEDALDAMDGRMLDGRELRVQMARY-GRPPSSSRSRGGRDR 107
F D A + A+D + L GR LR +A+Y GR P R + +D+
Sbjct: 57 LFVDGDSAARCVAALDQQQLMGRTLRASIAKYNGRAPEFIRRKEYKDK 104
>gi|426386443|ref|XP_004059694.1| PREDICTED: cold-inducible RNA-binding protein isoform 2 [Gorilla
gorilla gorilla]
gi|426386445|ref|XP_004059695.1| PREDICTED: cold-inducible RNA-binding protein isoform 3 [Gorilla
gorilla gorilla]
Length = 168
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 56/88 (63%), Gaps = 3/88 (3%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L V L++ T L +VF + G++ ++ + +DR T+ SRGF FV F + DA+DA+ AM
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 76 DGRMLDGRELRVQMARYGRPPSSSRSRG 103
+G+ +DGR++RV A S +RSRG
Sbjct: 68 NGKSVDGRQIRVDQA---GKSSDNRSRG 92
>gi|344307815|ref|XP_003422574.1| PREDICTED: LOW QUALITY PROTEIN: cold-inducible RNA-binding
protein-like [Loxodonta africana]
Length = 169
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 56/88 (63%), Gaps = 3/88 (3%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L V L++ T L +VF + G++ ++ + +DR T+ SRGF FV F + DA+DA+ AM
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 76 DGRMLDGRELRVQMARYGRPPSSSRSRG 103
+G+ +DGR++RV A S +RSRG
Sbjct: 68 NGKSVDGRQIRVDQA---GKSSDNRSRG 92
>gi|432101154|gb|ELK29438.1| Cold-inducible RNA-binding protein [Myotis davidii]
Length = 204
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 56/88 (63%), Gaps = 3/88 (3%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L V L++ T L +VF + G++ ++ + +DR T+ SRGF FV F + DA+DA+ AM
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 76 DGRMLDGRELRVQMARYGRPPSSSRSRG 103
+G+ +DGR++RV A S +RSRG
Sbjct: 68 NGKSVDGRQIRVDQA---GKSSDNRSRG 92
>gi|73987334|ref|XP_868600.1| PREDICTED: cold-inducible RNA-binding protein isoform 2 [Canis
lupus familiaris]
Length = 185
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 56/88 (63%), Gaps = 3/88 (3%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L V L++ T L +VF + G++ ++ + +DR T+ SRGF FV F + DA+DA+ AM
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 76 DGRMLDGRELRVQMARYGRPPSSSRSRG 103
+G+ +DGR++RV A S +RSRG
Sbjct: 68 NGKSVDGRQIRVDQA---GKSSDNRSRG 92
>gi|387018172|gb|AFJ51204.1| Cold-inducible RNA-binding protein-like [Crotalus adamanteus]
Length = 172
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 56/88 (63%), Gaps = 3/88 (3%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L V L++ T L +VF + G++ ++ + +DR T+ SRGF FV F + DA+DA+ AM
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 76 DGRMLDGRELRVQMARYGRPPSSSRSRG 103
+G+ +DGR++RV A S +RSRG
Sbjct: 68 NGKSVDGRQIRVDQA---GKSSDNRSRG 92
>gi|328859425|gb|EGG08534.1| hypothetical protein MELLADRAFT_84729 [Melampsora larici-populina
98AG31]
Length = 649
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 63/103 (61%), Gaps = 8/103 (7%)
Query: 2 SYGRPPPRIEG------MVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESR 55
SY P PR G L V +L + T DDLR+VF+ G++ + + RD+ T +S+
Sbjct: 415 SYVAPKPRGPGPNDPNSYARLYVGSLNFNLTDDDLRQVFQPFGDIEYVDLHRDQITGKSK 474
Query: 56 GFAFVRFFDKRDAEDALDAMDGRMLDGRELRVQMARYGRPPSS 98
G+AFV+F + DA++A++ M+G L GR LRV++ +PP++
Sbjct: 475 GYAFVQFKNMHDAKNAMEKMNGFQLAGRALRVEIK--AQPPAA 515
Score = 35.8 bits (81), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Query: 13 MVSLKVDNLTYRTTPDDLRRVFER-CGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDA 71
M S+ V L+ R +L + FE+ G+V D + DR +R S+G +V F + + A
Sbjct: 305 MRSVFVSQLSARVGDRELSQFFEQQAGKVRDARVITDRISRRSKGVGYVEFRELDSVQKA 364
Query: 72 LDAMDGRMLDGRELRVQ 88
L A+ G L G + VQ
Sbjct: 365 L-ALTGTKLLGLPVMVQ 380
>gi|20975276|dbj|BAB92955.1| cold inducible RNA-binding protein alpha [Hyla japonica]
Length = 162
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 51/75 (68%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L V L++ T L +VF + G++ ++ + +DR T+ SRGF FV F + DA+DA++AM
Sbjct: 9 LFVGGLSFDTEEQSLEQVFGKYGQISEVVVVKDRETKRSRGFGFVTFENPEDAKDAMEAM 68
Query: 76 DGRMLDGRELRVQMA 90
+G+ +DGR++RV A
Sbjct: 69 NGKSVDGRQIRVDQA 83
>gi|215734873|dbj|BAG95595.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 478
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 46/79 (58%)
Query: 12 GMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDA 71
VSL V NL P+D++ F++ G V D+Y+P+D T E RGFAFV F DA A
Sbjct: 33 AAVSLFVSNLPRSCRPEDVQVPFQKFGPVRDVYLPKDYNTGEPRGFAFVEFAHSSDASKA 92
Query: 72 LDAMDGRMLDGRELRVQMA 90
M+ +ML GRE+ V A
Sbjct: 93 RYHMNRKMLSGREISVAFA 111
>gi|149034582|gb|EDL89319.1| cold inducible RNA binding protein, isoform CRA_d [Rattus
norvegicus]
gi|149034583|gb|EDL89320.1| cold inducible RNA binding protein, isoform CRA_d [Rattus
norvegicus]
Length = 176
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 56/88 (63%), Gaps = 3/88 (3%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L V L++ T L +VF + G++ ++ + +DR T+ SRGF FV F + DA+DA+ AM
Sbjct: 8 LFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 76 DGRMLDGRELRVQMARYGRPPSSSRSRG 103
+G+ +DGR++RV A S +RSRG
Sbjct: 68 NGKSVDGRQIRVDQA---GKSSDNRSRG 92
>gi|218187112|gb|EEC69539.1| hypothetical protein OsI_38819 [Oryza sativa Indica Group]
Length = 263
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 50/82 (60%)
Query: 9 RIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDA 68
R +G SL V N+ +DLR FER G V D+Y+P+D ++ E RGFAFV F D DA
Sbjct: 32 REQGSGSLLVRNIPLSCRGEDLRVPFERFGPVRDVYLPKDYYSGEPRGFAFVEFVDPYDA 91
Query: 69 EDALDAMDGRMLDGRELRVQMA 90
+A M+ ++ GRE+ V +A
Sbjct: 92 SEAQYHMNRQVFFGREITVVLA 113
>gi|281341352|gb|EFB16936.1| hypothetical protein PANDA_012739 [Ailuropoda melanoleuca]
Length = 167
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 56/88 (63%), Gaps = 3/88 (3%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L V L++ T L +VF + G++ ++ + +DR T+ SRGF FV F + DA+DA+ AM
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 76 DGRMLDGRELRVQMARYGRPPSSSRSRG 103
+G+ +DGR++RV A S +RSRG
Sbjct: 68 NGKSVDGRQIRVDQA---GKSSDNRSRG 92
>gi|224098431|ref|XP_002311171.1| predicted protein [Populus trichocarpa]
gi|222850991|gb|EEE88538.1| predicted protein [Populus trichocarpa]
Length = 272
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 49/76 (64%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
SL V N+ P++LR +FER G V D+YIP+D T E RGF FV+F + DA +A
Sbjct: 45 SLLVRNIPRDCRPEELRGMFERFGVVRDVYIPKDYHTGEPRGFGFVQFVEPSDAMEAQHH 104
Query: 75 MDGRMLDGRELRVQMA 90
M+G++ GR++ V +A
Sbjct: 105 MNGQVFAGRQMFVVVA 120
>gi|148699639|gb|EDL31586.1| cold inducible RNA binding protein, isoform CRA_b [Mus musculus]
Length = 176
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 56/88 (63%), Gaps = 3/88 (3%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L V L++ T L +VF + G++ ++ + +DR T+ SRGF FV F + DA+DA+ AM
Sbjct: 8 LFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 76 DGRMLDGRELRVQMARYGRPPSSSRSRG 103
+G+ +DGR++RV A S +RSRG
Sbjct: 68 NGKSVDGRQIRVDQA---GKSSDNRSRG 92
>gi|18410283|ref|NP_567021.1| SC35-like splicing factor 30 [Arabidopsis thaliana]
gi|20466366|gb|AAM20500.1| putative RNA binding protein [Arabidopsis thaliana]
gi|21554261|gb|AAM63336.1| putative RNA binding protein [Arabidopsis thaliana]
gi|22136316|gb|AAM91236.1| putative RNA binding protein [Arabidopsis thaliana]
gi|332645866|gb|AEE79387.1| SC35-like splicing factor 30 [Arabidopsis thaliana]
Length = 262
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/100 (44%), Positives = 57/100 (57%), Gaps = 6/100 (6%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L V N+ P++LR FER G V D+YIPRD ++ + RGFAFV F D DA +A +M
Sbjct: 49 LLVRNIPLDCRPEELREPFERFGPVRDVYIPRDYYSGQPRGFAFVEFVDAYDAGEAQRSM 108
Query: 76 DGRMLDGRELRVQMARYGRPPSSSRSRGGRDRDRRRDRSR 115
+ R GRE+ V +A S SR R R + R RSR
Sbjct: 109 NRRSFAGREITVVVA------SESRKRPEEMRVKTRTRSR 142
>gi|218186222|gb|EEC68649.1| hypothetical protein OsI_37086 [Oryza sativa Indica Group]
Length = 773
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 47/77 (61%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
VSL V NLT P+D++ F++ G V D+Y+P+D T E RGFAFV F DA A
Sbjct: 331 VSLFVSNLTRSCRPEDVQVPFQKFGPVRDVYLPKDYNTGEPRGFAFVEFAHSSDASKARY 390
Query: 74 AMDGRMLDGRELRVQMA 90
M+ +ML GRE+ V A
Sbjct: 391 HMNRKMLSGREISVAFA 407
>gi|355702927|gb|EHH29418.1| hypothetical protein EGK_09841 [Macaca mulatta]
Length = 202
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 56/88 (63%), Gaps = 3/88 (3%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L V L++ T L +VF + G++ ++ + +DR T+ SRGF FV F + DA+DA+ AM
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 76 DGRMLDGRELRVQMARYGRPPSSSRSRG 103
+G+ +DGR++RV A S +RSRG
Sbjct: 68 NGKSVDGRQIRVDQA---GKSSDNRSRG 92
>gi|6680946|ref|NP_031731.1| cold-inducible RNA-binding protein [Mus musculus]
gi|346644681|ref|NP_001231002.1| cold-inducible RNA-binding protein [Cricetulus griseus]
gi|46395643|sp|P60826.1|CIRBP_CRIGR RecName: Full=Cold-inducible RNA-binding protein; AltName: Full=A18
hnRNP; AltName: Full=Glycine-rich RNA-binding protein
CIRP
gi|46397383|sp|P60825.1|CIRBP_RAT RecName: Full=Cold-inducible RNA-binding protein; AltName: Full=A18
hnRNP; AltName: Full=Glycine-rich RNA-binding protein
CIRP
gi|46397384|sp|P60824.1|CIRBP_MOUSE RecName: Full=Cold-inducible RNA-binding protein; AltName: Full=A18
hnRNP; AltName: Full=Glycine-rich RNA-binding protein
CIRP
gi|1060919|dbj|BAA11213.1| CIRP [Mus musculus]
gi|1783168|dbj|BAA19092.1| CIRP [Rattus norvegicus]
gi|12852647|dbj|BAB29491.1| unnamed protein product [Mus musculus]
gi|34099624|gb|AAQ57122.1| cold-inducible RNA binding protein [Cricetulus griseus]
gi|49522692|gb|AAH75699.1| Cold inducible RNA binding protein [Mus musculus]
gi|74209036|dbj|BAE21245.1| unnamed protein product [Mus musculus]
gi|115345819|gb|ABI95367.1| cold-inducible RNA-binding protein [Cricetulus griseus]
gi|148699640|gb|EDL31587.1| cold inducible RNA binding protein, isoform CRA_c [Mus musculus]
gi|149034580|gb|EDL89317.1| cold inducible RNA binding protein, isoform CRA_c [Rattus
norvegicus]
gi|149034581|gb|EDL89318.1| cold inducible RNA binding protein, isoform CRA_c [Rattus
norvegicus]
Length = 172
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 56/88 (63%), Gaps = 3/88 (3%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L V L++ T L +VF + G++ ++ + +DR T+ SRGF FV F + DA+DA+ AM
Sbjct: 8 LFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 76 DGRMLDGRELRVQMARYGRPPSSSRSRG 103
+G+ +DGR++RV A S +RSRG
Sbjct: 68 NGKSVDGRQIRVDQA---GKSSDNRSRG 92
>gi|355755275|gb|EHH59022.1| hypothetical protein EGM_09015 [Macaca fascicularis]
Length = 202
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 56/88 (63%), Gaps = 3/88 (3%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L V L++ T L +VF + G++ ++ + +DR T+ SRGF FV F + DA+DA+ AM
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 76 DGRMLDGRELRVQMARYGRPPSSSRSRG 103
+G+ +DGR++RV A S +RSRG
Sbjct: 68 NGKSVDGRQIRVDQA---GKSSDNRSRG 92
>gi|47271546|ref|NP_112409.2| cold-inducible RNA-binding protein [Rattus norvegicus]
gi|46623308|gb|AAH69219.1| Cold inducible RNA binding protein [Rattus norvegicus]
Length = 172
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 56/88 (63%), Gaps = 3/88 (3%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L V L++ T L +VF + G++ ++ + +DR T+ SRGF FV F + DA+DA+ AM
Sbjct: 8 LFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 76 DGRMLDGRELRVQMARYGRPPSSSRSRG 103
+G+ +DGR++RV A S +RSRG
Sbjct: 68 NGKSVDGRQIRVDQA---GKSSDNRSRG 92
>gi|395831301|ref|XP_003788741.1| PREDICTED: cold-inducible RNA-binding protein [Otolemur garnettii]
Length = 172
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 56/88 (63%), Gaps = 3/88 (3%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L + L++ T L +VF + G++ ++ + +DR T+ SRGF FV F + DA+DA+ AM
Sbjct: 8 LFIGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 76 DGRMLDGRELRVQMARYGRPPSSSRSRG 103
+G+ +DGR++RV A S +RSRG
Sbjct: 68 NGKSVDGRQIRVDQA---GKSSDNRSRG 92
>gi|194685575|ref|XP_001788719.1| PREDICTED: serine/arginine-rich splicing factor 12, partial [Bos
taurus]
Length = 145
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 57/96 (59%), Gaps = 12/96 (12%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR- 61
Y RPP SL V N+ T P+DLRR F R G + D+YIP D +TR RGFA+V+
Sbjct: 4 YTRPP-----NTSLFVRNVADATRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQY 58
Query: 62 ------FFDKRDAEDALDAMDGRMLDGRELRVQMAR 91
F D RDAEDAL ++ + + GR++ +Q A+
Sbjct: 59 PLFYFIFEDVRDAEDALYNLNRKWVCGRQIEIQFAQ 94
>gi|409991967|ref|ZP_11275186.1| RNA-binding region RNP-1 [Arthrospira platensis str. Paraca]
gi|409937161|gb|EKN78606.1| RNA-binding region RNP-1 [Arthrospira platensis str. Paraca]
Length = 93
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 54/95 (56%), Gaps = 3/95 (3%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
+S+ V NL+Y TPDDL F G V IP DR T SRGF FV + + + A+D
Sbjct: 1 MSIYVGNLSYDVTPDDLSAAFAEYGTVKRSMIPTDRETGRSRGFGFVEMSSEDEEKVAID 60
Query: 74 AMDGRMLDGRELRVQMARYGRPPSSSRSRGGRDRD 108
A+DG GR L+V A RP ++R RGG +RD
Sbjct: 61 ALDGAEWKGRSLKVNKA---RPRDNNRQRGGFNRD 92
>gi|71897051|ref|NP_001026518.1| cold-inducible RNA-binding protein [Gallus gallus]
gi|53128363|emb|CAG31295.1| hypothetical protein RCJMB04_4m1 [Gallus gallus]
Length = 190
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 56/88 (63%), Gaps = 3/88 (3%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L V L++ T L +VF + G++ ++ + +DR T+ SRGF FV F + DA+DA+ AM
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 76 DGRMLDGRELRVQMARYGRPPSSSRSRG 103
+G+ +DGR++RV A S +RSRG
Sbjct: 68 NGKSVDGRQIRVDQA---GKSSENRSRG 92
>gi|327290660|ref|XP_003230040.1| PREDICTED: cold-inducible RNA-binding protein-like [Anolis
carolinensis]
Length = 176
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 56/88 (63%), Gaps = 3/88 (3%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L V L++ T L +VF + G++ ++ + +DR T+ SRGF FV F + DA+DA+ AM
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 76 DGRMLDGRELRVQMARYGRPPSSSRSRG 103
+G+ +DGR++RV A S +RSRG
Sbjct: 68 NGKSVDGRQIRVDQA---GKSSDNRSRG 92
>gi|148699638|gb|EDL31585.1| cold inducible RNA binding protein, isoform CRA_a [Mus musculus]
gi|149034578|gb|EDL89315.1| cold inducible RNA binding protein, isoform CRA_b [Rattus
norvegicus]
gi|149034579|gb|EDL89316.1| cold inducible RNA binding protein, isoform CRA_b [Rattus
norvegicus]
Length = 168
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 56/88 (63%), Gaps = 3/88 (3%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L V L++ T L +VF + G++ ++ + +DR T+ SRGF FV F + DA+DA+ AM
Sbjct: 8 LFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 76 DGRMLDGRELRVQMARYGRPPSSSRSRG 103
+G+ +DGR++RV A S +RSRG
Sbjct: 68 NGKSVDGRQIRVDQA---GKSSDNRSRG 92
>gi|425434339|ref|ZP_18814808.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9432]
gi|425450077|ref|ZP_18829909.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 7941]
gi|440751641|ref|ZP_20930844.1| RNA recognition motif family protein [Microcystis aeruginosa
TAIHU98]
gi|389676192|emb|CCH94745.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9432]
gi|389769258|emb|CCI05857.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 7941]
gi|440176134|gb|ELP55407.1| RNA recognition motif family protein [Microcystis aeruginosa
TAIHU98]
Length = 97
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
+S+ V NL + DD+ VF+ G++ +++P DR T + RGFAFV + A+
Sbjct: 1 MSIYVGNLPFEVDQDDVVEVFKEYGKIKRVHLPMDRETGKKRGFAFVEMETPEEETKAIA 60
Query: 74 AMDGRMLDGRELRVQMARYGRPPSSSRSRGGRDRDRR 110
A+DG GREL+V AR R P SS G R+RDRR
Sbjct: 61 ALDGAQWMGRELKVNQARE-REPKSSFGGGNRNRDRR 96
>gi|344243389|gb|EGV99492.1| Cold-inducible RNA-binding protein [Cricetulus griseus]
Length = 184
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 56/88 (63%), Gaps = 3/88 (3%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L V L++ T L +VF + G++ ++ + +DR T+ SRGF FV F + DA+DA+ AM
Sbjct: 8 LFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 76 DGRMLDGRELRVQMARYGRPPSSSRSRG 103
+G+ +DGR++RV A S +RSRG
Sbjct: 68 NGKSVDGRQIRVDQA---GKSSDNRSRG 92
>gi|345320496|ref|XP_001519931.2| PREDICTED: hypothetical protein LOC100090925, partial
[Ornithorhynchus anatinus]
Length = 369
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 46/64 (71%)
Query: 28 DDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAMDGRMLDGRELRV 87
+DLRR F R G + D+Y+P D +TR RGFA+V+F D RDAEDAL +D + + GR++ +
Sbjct: 103 EDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEI 162
Query: 88 QMAR 91
Q A+
Sbjct: 163 QFAQ 166
>gi|441656594|ref|XP_003277032.2| PREDICTED: cold-inducible RNA-binding protein [Nomascus leucogenys]
Length = 144
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 56/88 (63%), Gaps = 3/88 (3%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L V L++ T L +VF + G++ ++ + +DR T+ SRGF FV F + DA+DA+ AM
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 76 DGRMLDGRELRVQMARYGRPPSSSRSRG 103
+G+ +DGR++RV A S +RSRG
Sbjct: 68 NGKSVDGRQIRVDQA---GKSSDNRSRG 92
>gi|297282509|ref|XP_001113147.2| PREDICTED: splicing factor, arginine/serine-rich 13A-like [Macaca
mulatta]
Length = 98
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 46/64 (71%)
Query: 28 DDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAMDGRMLDGRELRV 87
+DLRR F R G + D+Y+P D +TR RGFA+V+F D RDAEDAL +D + + GR++ +
Sbjct: 10 EDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEI 69
Query: 88 QMAR 91
Q A+
Sbjct: 70 QFAQ 73
>gi|222629430|gb|EEE61562.1| hypothetical protein OsJ_15917 [Oryza sativa Japonica Group]
Length = 149
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 56/89 (62%), Gaps = 2/89 (2%)
Query: 5 RPPPRI-EGMVS-LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRF 62
PPP G S L V L++RTT + LR FER G++ ++ + +R + RGFAF+ +
Sbjct: 56 HPPPSASHGAASRLYVSGLSFRTTEESLRNAFERFGQLTEVNLVMERVAKRPRGFAFLSY 115
Query: 63 FDKRDAEDALDAMDGRMLDGRELRVQMAR 91
+ ++++A++ M G+ LDGR + V++AR
Sbjct: 116 ASEEESKNAMEGMQGKFLDGRVIFVEVAR 144
>gi|32352198|dbj|BAC78592.1| pre-mRNA splicing factor [Oryza sativa Japonica Group]
Length = 232
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 50/82 (60%)
Query: 9 RIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDA 68
R +G SL V N+ +DLR FER G V D+Y+P+D ++ E RGFAFV F D DA
Sbjct: 1 REQGSGSLLVRNIPLSCRGEDLRVPFERFGPVRDVYLPKDYYSGEPRGFAFVEFVDPYDA 60
Query: 69 EDALDAMDGRMLDGRELRVQMA 90
+A M+ ++ GRE+ V +A
Sbjct: 61 SEAQYHMNRQVFFGREITVVLA 82
>gi|194385818|dbj|BAG65284.1| unnamed protein product [Homo sapiens]
Length = 263
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 70/127 (55%), Gaps = 13/127 (10%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L V L++ T L +VF + G++ ++ + +DR T+ SRGF FV F + DA+DA+ AM
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 76 DGRMLDGRELRVQMARYGRPPSSSRSRGGRDRDRRRDRSRSRDRRYTRSRS-FSSRSRSG 134
+G+ +DGR++RV A DR +R SR Y SR +SSRS+SG
Sbjct: 68 NGKSVDGRQIRVDQAGG------------GDRGYGGNRFESRSGGYGGSRDYYSSRSQSG 115
Query: 135 SKSPRKA 141
S R +
Sbjct: 116 GYSDRSS 122
>gi|73987338|ref|XP_868602.1| PREDICTED: cold-inducible RNA-binding protein isoform 4 [Canis
lupus familiaris]
Length = 219
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 50/75 (66%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L V L++ T L +VF + G++ ++ + +DR T+ SRGF FV F + DA+DA+ AM
Sbjct: 55 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 114
Query: 76 DGRMLDGRELRVQMA 90
+G+ +DGR++RV A
Sbjct: 115 NGKSVDGRQIRVDQA 129
>gi|281344246|gb|EFB19830.1| hypothetical protein PANDA_011704 [Ailuropoda melanoleuca]
Length = 241
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 27 PDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFF-DKRDAEDALDAMDGRMLDGREL 85
P+DLRR F R G + D+YIP D +TR RGFA++ F D RDAEDAL ++ + + GR++
Sbjct: 2 PEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYLVIFEDVRDAEDALYNLNRKWVCGRQI 61
Query: 86 RVQMAR 91
+Q A+
Sbjct: 62 EIQFAQ 67
>gi|431922216|gb|ELK19307.1| Cold-inducible RNA-binding protein [Pteropus alecto]
Length = 220
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 56/88 (63%), Gaps = 3/88 (3%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L V L++ T L +VF + G++ ++ + +DR T+ SRGF FV F + DA+DA+ AM
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 76 DGRMLDGRELRVQMARYGRPPSSSRSRG 103
+G+ +DGR++RV A S +RSRG
Sbjct: 68 NGKSVDGRQIRVDQA---GKSSDNRSRG 92
>gi|77735511|ref|NP_001029450.1| cold-inducible RNA-binding protein [Bos taurus]
gi|74353851|gb|AAI02774.1| Cold inducible RNA binding protein [Bos taurus]
gi|296485364|tpg|DAA27479.1| TPA: cold inducible RNA binding protein [Bos taurus]
Length = 213
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 56/88 (63%), Gaps = 3/88 (3%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L V L++ T L +VF + G++ ++ + +DR T+ SRGF FV F + DA+DA+ AM
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 76 DGRMLDGRELRVQMARYGRPPSSSRSRG 103
+G+ +DGR++RV A S +RSRG
Sbjct: 68 NGKSVDGRQIRVDQA---GKSSDNRSRG 92
>gi|219880797|gb|ACL51672.1| truncated RNA binding motif protein Y-linked [Macaca mulatta]
Length = 231
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 78/167 (46%), Gaps = 33/167 (19%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L + LT +T L+ VF + G + ++ + +DR TR+SRGFAFV F + DA++A M
Sbjct: 10 LFIGGLTRKTNEKMLKAVFVKHGPISEVLLIKDR-TRKSRGFAFVTFENPEDAKNAAKDM 68
Query: 76 DGRMLDGRELRVQMARY--------GRPPSSSRSR-------------GGRDRDRRRDRS 114
+G+ LDG+ ++V+ A+ RPP SSR+R GG
Sbjct: 69 NGKSLDGKAIKVEQAKKPSFQSGGRQRPPPSSRNRSPSGSLRSAKGSSGGTKGWHPSHEG 128
Query: 115 RSRDRRYTRSRSFSS-----------RSRSGSKSPRKARSKSIDRDN 150
D YT + SS SRSG P+K+ ++ R N
Sbjct: 129 HLDDGGYTLDLNMSSSEGHIPVKRHPSSRSGGPPPKKSSPSAVARSN 175
>gi|218195435|gb|EEC77862.1| hypothetical protein OsI_17125 [Oryza sativa Indica Group]
Length = 152
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 56/89 (62%), Gaps = 2/89 (2%)
Query: 5 RPPPRI-EGMVS-LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRF 62
PPP G S L V L++RTT + LR FER G++ ++ + +R + RGFAF+ +
Sbjct: 59 HPPPSASHGAASRLYVSGLSFRTTEESLRNAFERFGQLTEVNLVMERVAKRPRGFAFLSY 118
Query: 63 FDKRDAEDALDAMDGRMLDGRELRVQMAR 91
+ ++++A++ M G+ LDGR + V++AR
Sbjct: 119 ASEEESKNAMEGMQGKFLDGRVIFVEVAR 147
>gi|121705230|ref|XP_001270878.1| glycine-rich RNA-binding protein, putative [Aspergillus clavatus
NRRL 1]
gi|119399024|gb|EAW09452.1| glycine-rich RNA-binding protein, putative [Aspergillus clavatus
NRRL 1]
Length = 133
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 56/97 (57%), Gaps = 2/97 (2%)
Query: 13 MVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDAL 72
M L + L + TT D LR+ FE+ G+V + + +DR T SRGF FVRF DA+ A+
Sbjct: 1 MSKLFIGGLAWHTTDDALRQGFEQFGQVEEAIVVKDRDTNRSRGFGFVRFSSDSDADKAM 60
Query: 73 DAMDGRMLDGRELRVQMA--RYGRPPSSSRSRGGRDR 107
DAM+ + DGR +RV A R R + RGG ++
Sbjct: 61 DAMNNQEFDGRTIRVDKASERAPRNNGGFQGRGGYNQ 97
>gi|197128622|gb|ACH45120.1| putative cold inducible RNA binding protein variant 1
[Taeniopygia guttata]
Length = 171
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 51/75 (68%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L V L++ T + L +VF + G++ ++ + +DR T+ SRGF FV F + DA+DA+ AM
Sbjct: 8 LFVGGLSFDTNEESLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 76 DGRMLDGRELRVQMA 90
+G+ +DGR++RV A
Sbjct: 68 NGKSVDGRQIRVDQA 82
>gi|226499338|ref|NP_001149519.1| glycine-rich RNA-binding protein 8 [Zea mays]
gi|195627730|gb|ACG35695.1| glycine-rich RNA-binding protein 8 [Zea mays]
Length = 198
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 61/110 (55%), Gaps = 8/110 (7%)
Query: 18 VDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAMDG 77
+ NL++ TT + L+ F + G + + + D+F+ SRGF FV F +K+ EDA++ M+G
Sbjct: 11 IGNLSWSTTDESLKDAFSKFGNLTEAKVVLDKFSGRSRGFGFVTFDEKQAMEDAIEGMNG 70
Query: 78 RMLDGRELRVQMARYGRPPSSSRSRGGRDRDRRRDRSRSRDRRYTRSRSF 127
LDGR + V A+ P GRDR+ RD R R RY R R +
Sbjct: 71 LDLDGRNITVDKAQPQGP--------GRDRNGDRDYDRERGSRYERGRDY 112
>gi|90076360|dbj|BAE87860.1| unnamed protein product [Macaca fascicularis]
Length = 207
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 56/88 (63%), Gaps = 3/88 (3%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L V L++ T L +VF + G++ ++ + +DR T+ SRGF FV F + DA+DA+ AM
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 76 DGRMLDGRELRVQMARYGRPPSSSRSRG 103
+G+ +DGR++RV A S +RSRG
Sbjct: 68 NGKSVDGRQIRVDQA---GKSSDNRSRG 92
>gi|425442381|ref|ZP_18822630.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9717]
gi|389716645|emb|CCH99152.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9717]
Length = 98
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 55/97 (56%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
+S+ V NL + +D+ VF+ GE+ +++P DR T+ RGFAFV A+
Sbjct: 1 MSIYVGNLPFEVDQEDVVEVFKEYGEIKRVHLPMDRETKRKRGFAFVEMETPEQEAKAIA 60
Query: 74 AMDGRMLDGRELRVQMARYGRPPSSSRSRGGRDRDRR 110
A+DG GREL+V AR P SS + G R+R+RR
Sbjct: 61 ALDGAQWMGRELKVNQAREKEPRSSFGAGGDRNRERR 97
>gi|297620951|ref|YP_003709088.1| RNA-binding protein [Waddlia chondrophila WSU 86-1044]
gi|297376252|gb|ADI38082.1| RNA-binding protein [Waddlia chondrophila WSU 86-1044]
gi|337293226|emb|CCB91217.1| putative RNA-binding protein rbpA [Waddlia chondrophila 2032/99]
Length = 92
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L V NL+YR + D + F GEV I DRFT +S+GF FV F DK AE+A+ +
Sbjct: 3 LYVGNLSYRVSEDQFKDYFASFGEVLSAKIITDRFTGQSKGFGFVEFADKEAAEEAIKEL 62
Query: 76 DGRMLDGRELRVQMAR--YGRPPSSSRSRG 103
+G +GR + V A+ RPP S++RG
Sbjct: 63 NGSNFEGRSIVVNEAKPMEDRPPRRSKTRG 92
>gi|425461447|ref|ZP_18840925.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9808]
gi|389825682|emb|CCI24355.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9808]
Length = 97
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
+S+ V NL + DD+ VF+ G++ +++P DR T + RGFAFV + A+
Sbjct: 1 MSIYVGNLPFEVDQDDVVEVFKEYGKIKRVHLPMDRETGKKRGFAFVEMETPEEETKAIA 60
Query: 74 AMDGRMLDGRELRVQMARYGRPPSSSRSRGGRDRDRR 110
A+DG GREL+V AR + P SS G R+RDRR
Sbjct: 61 ALDGAQWMGRELKVNQARE-KEPKSSFGGGNRNRDRR 96
>gi|440911383|gb|ELR61059.1| Serine/arginine-rich splicing factor 12, partial [Bos grunniens
mutus]
Length = 241
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 27 PDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFF-DKRDAEDALDAMDGRMLDGREL 85
P+DLRR F R G + D+YIP D +TR RGFA++ F D RDAEDAL ++ + + GR++
Sbjct: 2 PEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYLVIFEDVRDAEDALYNLNRKWVCGRQI 61
Query: 86 RVQMAR 91
+Q A+
Sbjct: 62 EIQFAQ 67
>gi|431838154|gb|ELK00086.1| 35 kDa SR repressor protein, partial [Pteropus alecto]
Length = 241
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 27 PDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFF-DKRDAEDALDAMDGRMLDGREL 85
P+DLRR F R G + D+YIP D +TR RGFA++ F D RDAEDAL ++ + + GR++
Sbjct: 2 PEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYLVIFEDVRDAEDALYNLNRKWVCGRQI 61
Query: 86 RVQMAR 91
+Q A+
Sbjct: 62 EIQFAQ 67
>gi|325191972|emb|CCA26441.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 248
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Query: 15 SLKVDNLTYRTTPDDLRRVFER-CGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
SL V NL +TT DDLRR F R G++ D+YIP+D T E R FAFV F D R+A +
Sbjct: 144 SLLVRNLNPKTTGDDLRRAFSRRPGDIRDVYIPKDHSTNELRTFAFVEFRDAREAREVKY 203
Query: 74 AMDGRMLDGRELRVQMAR 91
MD LDG E+ V A+
Sbjct: 204 EMDRTTLDGNEIAVLFAQ 221
>gi|238014210|gb|ACR38140.1| unknown [Zea mays]
gi|414873814|tpg|DAA52371.1| TPA: glycine-rich RNA-binding protein 8 isoform 1 [Zea mays]
gi|414873815|tpg|DAA52372.1| TPA: glycine-rich RNA-binding protein 8 isoform 2 [Zea mays]
gi|414873816|tpg|DAA52373.1| TPA: glycine-rich RNA-binding protein 8 isoform 3 [Zea mays]
Length = 205
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 61/110 (55%), Gaps = 8/110 (7%)
Query: 18 VDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAMDG 77
+ NL++ TT + L+ F + G + + + D+F+ SRGF FV F +K+ EDA++ M+G
Sbjct: 11 IGNLSWSTTDESLKDAFSKFGNLTEAKVVLDKFSGRSRGFGFVTFDEKQAMEDAIEGMNG 70
Query: 78 RMLDGRELRVQMARYGRPPSSSRSRGGRDRDRRRDRSRSRDRRYTRSRSF 127
LDGR + V A+ P GRDR+ RD R R RY R R +
Sbjct: 71 LDLDGRNITVDKAQPQGP--------GRDRNGDRDYDRERGSRYERGRDY 112
>gi|403224014|dbj|BAM42144.1| Ser/Arg-rich splicing factor [Theileria orientalis strain
Shintoku]
Length = 267
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 48/77 (62%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
S V NL + TTP +R FER G++ D+Y+P D T+ RGF FV +++K DA DA+ A
Sbjct: 8 STLVRNLRFSTTPQVVREAFERFGKIRDVYLPLDFNTKRPRGFGFVEYYEKSDAVDAVKA 67
Query: 75 MDGRMLDGRELRVQMAR 91
MD LDG + +A+
Sbjct: 68 MDNTDLDGSIINCCLAQ 84
>gi|402853376|ref|XP_003891372.1| PREDICTED: serine/arginine-rich splicing factor 10 [Papio anubis]
Length = 261
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 61/105 (58%), Gaps = 7/105 (6%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRF 62
Y RPP SL V N+ T +DLRR F R G + D+Y+P D +TR RG + F
Sbjct: 4 YLRPP-----NTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGL-LITF 57
Query: 63 FDKRDAEDALDAMDGRMLDGRELRVQMARYGR-PPSSSRSRGGRD 106
D RDAEDAL +D + + GR++ +Q A+ R P+ +++ GR+
Sbjct: 58 EDVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEGRN 102
>gi|417397313|gb|JAA45690.1| Putative rasgap sh3 binding protein rasputin [Desmodus rotundus]
Length = 218
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 50/75 (66%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L V L++ T L +VF + G++ ++ + +DR T+ SRGF FV F + DA+DA+ AM
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 76 DGRMLDGRELRVQMA 90
+G+ +DGR++RV A
Sbjct: 68 NGKSVDGRQIRVDQA 82
>gi|355561899|gb|EHH18531.1| hypothetical protein EGK_15157, partial [Macaca mulatta]
gi|355757706|gb|EHH61231.1| hypothetical protein EGM_19190, partial [Macaca fascicularis]
Length = 241
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 27 PDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFF-DKRDAEDALDAMDGRMLDGREL 85
P+DLRR F R G + D+YIP D +TR RGFA++ F D RDAEDAL ++ + + GR++
Sbjct: 2 PEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYLVIFEDVRDAEDALYNLNRKWVCGRQI 61
Query: 86 RVQMAR 91
+Q A+
Sbjct: 62 EIQFAQ 67
>gi|119589931|gb|EAW69525.1| cold inducible RNA binding protein, isoform CRA_d [Homo sapiens]
Length = 311
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 62/107 (57%), Gaps = 7/107 (6%)
Query: 1 MSYGRPPPRIEGMVS----LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRG 56
M++G M S L V L++ T L +VF + G++ ++ + +DR T+ SRG
Sbjct: 1 MTWGTREEEQAAMASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRG 60
Query: 57 FAFVRFFDKRDAEDALDAMDGRMLDGRELRVQMARYGRPPSSSRSRG 103
F FV F + DA+DA+ AM+G+ +DGR++RV A S +RSRG
Sbjct: 61 FGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQA---GKSSDNRSRG 104
>gi|408398205|gb|EKJ77338.1| hypothetical protein FPSE_02416 [Fusarium pseudograminearum
CS3096]
Length = 128
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Query: 13 MVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDAL 72
M L V NL++ TT D LR+ F GEV D I RDR T +RGF FV F + A A+
Sbjct: 1 MSKLYVGNLSWNTTDDTLRQTFSEFGEVTDSIIMRDRETGRARGFGFVTFSTEEQANAAV 60
Query: 73 DAMDGRMLDGRELRVQMARYGRPP 96
DA++ + LDGR +RV +A RP
Sbjct: 61 DALNEQELDGRRIRVNVAN-ARPA 83
>gi|410343221|gb|JAA40557.1| cold inducible RNA binding protein [Pan troglodytes]
Length = 203
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 50/75 (66%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L V L++ T L +VF + G++ ++ + +DR T+ SRGF FV F + DA+DA+ AM
Sbjct: 39 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 98
Query: 76 DGRMLDGRELRVQMA 90
+G+ +DGR++RV A
Sbjct: 99 NGKSVDGRQIRVDQA 113
>gi|395513325|ref|XP_003760877.1| PREDICTED: cold-inducible RNA-binding protein [Sarcophilus
harrisii]
Length = 172
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 50/75 (66%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L V L++ T L +VF + G++ ++ + +DR T+ SRGF FV F + DA+DA+ AM
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQIAEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 76 DGRMLDGRELRVQMA 90
+G+ +DGR++RV A
Sbjct: 68 NGKSVDGRQIRVDQA 82
>gi|338710589|ref|XP_001915964.2| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 12 [Equus caballus]
Length = 284
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 51/85 (60%), Gaps = 9/85 (10%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR---------FFDKR 66
+K+D P+DLRR F R G + D+YIP D +TR RGFA+V+ F D R
Sbjct: 26 MKLDIWPPGNWPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQYPLSYRLVIFEDVR 85
Query: 67 DAEDALDAMDGRMLDGRELRVQMAR 91
DAEDAL ++ + + GR++ +Q A+
Sbjct: 86 DAEDALYNLNRKWVCGRQIEIQFAQ 110
>gi|417408518|gb|JAA50808.1| Putative rna-binding protein seb4 rrm superfamily, partial
[Desmodus rotundus]
Length = 193
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 50/75 (66%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L V L++ T L +VF + G++ ++ + +DR T+ SRGF FV F + DA+DA+ AM
Sbjct: 29 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 88
Query: 76 DGRMLDGRELRVQMA 90
+G+ +DGR++RV A
Sbjct: 89 NGKSVDGRQIRVDQA 103
>gi|302782525|ref|XP_002973036.1| hypothetical protein SELMODRAFT_8400 [Selaginella moellendorffii]
gi|302805506|ref|XP_002984504.1| hypothetical protein SELMODRAFT_8401 [Selaginella moellendorffii]
gi|300147892|gb|EFJ14554.1| hypothetical protein SELMODRAFT_8401 [Selaginella moellendorffii]
gi|300159637|gb|EFJ26257.1| hypothetical protein SELMODRAFT_8400 [Selaginella moellendorffii]
Length = 93
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 50/76 (65%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
SL V N++ T DDLR FER G V D+Y+P+D ++ E RGF FV+F D RDA +A
Sbjct: 4 SLLVRNISRDTRADDLRGPFERYGAVKDVYLPKDFYSGEPRGFGFVQFIDPRDAIEAQYK 63
Query: 75 MDGRMLDGRELRVQMA 90
M+ +++ GRE+ V A
Sbjct: 64 MNHQLIRGREVSVVFA 79
>gi|297746454|emb|CBI16510.3| unnamed protein product [Vitis vinifera]
Length = 269
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/161 (38%), Positives = 74/161 (45%), Gaps = 38/161 (23%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFT---------------------- 51
SL V NL + +DLRR F + G + DIY+PRD +T
Sbjct: 38 TSLLVRNLRHDCRGEDLRRPFGQFGPLKDIYLPRDYYTGEIKVLKTSINLEEFQVILKLT 97
Query: 52 --RESRGFAFVRFFDKRDAEDALDAMDGRMLDGRELRVQMARYGR-PPSSSRSRGGRDRD 108
RE RGF FV++ D DA +A MDG++L GREL V A R PS R+
Sbjct: 98 LAREPRGFGFVQYVDPADAAEAKYQMDGQILHGRELTVVFAEENRKKPSDMRA------- 150
Query: 109 RRRDRSRSRDRRYTRSRSFSSRSRSGSKSPRKARSKSIDRD 149
R R R R Y R RS SR S PR ARS S RD
Sbjct: 151 ----RERGRGRFYDRRRSPLRYSR--SPPPRHARSPSRGRD 185
>gi|324520554|gb|ADY47664.1| Serine/arginine-rich splicing factor 12 [Ascaris suum]
Length = 183
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 52/91 (57%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MS R R + +L V + Y P+DLR +FER G V D+YIP D +T ESRGFA+V
Sbjct: 1 MSRKRACCRADEGTTLYVRQVHYAARPEDLRTLFERMGPVRDVYIPLDYYTHESRGFAYV 60
Query: 61 RFFDKRDAEDALDAMDGRMLDGRELRVQMAR 91
++ DAE A + G + GR + + A+
Sbjct: 61 KYEYVGDAERAYKQLHGCAILGRRIAIDWAQ 91
>gi|224107319|ref|XP_002314444.1| predicted protein [Populus trichocarpa]
gi|222863484|gb|EEF00615.1| predicted protein [Populus trichocarpa]
Length = 252
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 65/130 (50%), Gaps = 4/130 (3%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L + NL P+DLR FE+ G + DIY+P++ T E RGF FV++ DA +A M
Sbjct: 50 LLIRNLPLDARPEDLRGPFEKFGPLKDIYLPKNYHTGEPRGFGFVKYRYGEDAAEAKKRM 109
Query: 76 DGRMLDGRELRVQMARYGRPPSSSRSRGGRDRDRRRDRSRSRDRRYTRSRSFSSRSRSGS 135
D +++ GRE+R+ A R R R DR R T RS R RS S
Sbjct: 110 DHKIIGGREIRIVFAEENRKTPQEMRRTPRTSDRHGGSHGGR----TPPRSPRHRYRSYS 165
Query: 136 KSPRKARSKS 145
+SP AR S
Sbjct: 166 RSPSPARHDS 175
>gi|197128619|gb|ACH45117.1| putative cold inducible RNA binding protein variant 1
[Taeniopygia guttata]
gi|197128620|gb|ACH45118.1| putative cold inducible RNA binding protein variant 1
[Taeniopygia guttata]
gi|197128623|gb|ACH45121.1| putative cold inducible RNA binding protein variant 1
[Taeniopygia guttata]
gi|197128625|gb|ACH45123.1| putative cold inducible RNA binding protein variant 1
[Taeniopygia guttata]
gi|197128627|gb|ACH45125.1| putative cold inducible RNA binding protein variant 1
[Taeniopygia guttata]
gi|197128628|gb|ACH45126.1| putative cold inducible RNA binding protein variant 1
[Taeniopygia guttata]
Length = 171
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 50/75 (66%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L V L++ T L +VF + G++ ++ + +DR T+ SRGF FV F + DA+DA+ AM
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 76 DGRMLDGRELRVQMA 90
+G+ +DGR++RV A
Sbjct: 68 NGKSVDGRQIRVDQA 82
>gi|334326698|ref|XP_001365067.2| PREDICTED: cold-inducible RNA-binding protein-like [Monodelphis
domestica]
Length = 172
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 50/75 (66%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L V L++ T L +VF + G++ ++ + +DR T+ SRGF FV F + DA+DA+ AM
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQIAEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 76 DGRMLDGRELRVQMA 90
+G+ +DGR++RV A
Sbjct: 68 NGKSVDGRQIRVDQA 82
>gi|119589928|gb|EAW69522.1| cold inducible RNA binding protein, isoform CRA_c [Homo sapiens]
gi|119589930|gb|EAW69524.1| cold inducible RNA binding protein, isoform CRA_c [Homo sapiens]
Length = 297
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 50/75 (66%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L V L++ T L +VF + G++ ++ + +DR T+ SRGF FV F + DA+DA+ AM
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 76 DGRMLDGRELRVQMA 90
+G+ +DGR++RV A
Sbjct: 68 NGKSVDGRQIRVDQA 82
>gi|429329487|gb|AFZ81246.1| RNA recognition motif domain-containing protein [Babesia equi]
Length = 212
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 47/77 (61%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
SL + NL Y T+P ++ FER G + D+Y+P D TR RGF FV +++K D +A+ A
Sbjct: 8 SLLIRNLRYSTSPQIVKETFERFGRIRDVYLPLDYNTRRPRGFGFVEYYEKEDVLEAVKA 67
Query: 75 MDGRMLDGRELRVQMAR 91
MD LDG + +A+
Sbjct: 68 MDNADLDGSVITCCLAQ 84
>gi|291566709|dbj|BAI88981.1| RNA-binding protein [Arthrospira platensis NIES-39]
Length = 93
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 54/95 (56%), Gaps = 3/95 (3%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
+S+ V NL+Y TPDDL F G V IP DR T SRGF FV + + + A++
Sbjct: 1 MSIYVGNLSYDVTPDDLSAAFAEYGTVKRSMIPTDRETGRSRGFGFVEMSSEDEEKVAIN 60
Query: 74 AMDGRMLDGRELRVQMARYGRPPSSSRSRGGRDRD 108
A+DG GR L+V A RP ++R RGG +RD
Sbjct: 61 ALDGAEWKGRSLKVNKA---RPRDNNRQRGGFNRD 92
>gi|224102541|ref|XP_002312718.1| predicted protein [Populus trichocarpa]
gi|222852538|gb|EEE90085.1| predicted protein [Populus trichocarpa]
Length = 133
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 48/79 (60%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L + NL P+DLRR FE+ G + DIY+P++ +T E RGF FV++ DA +A M
Sbjct: 42 LLIRNLPLDARPEDLRRSFEKFGPLKDIYLPKNYYTGEPRGFGFVKYRHSEDAAEAKQRM 101
Query: 76 DGRMLDGRELRVQMARYGR 94
D + + GRE+R+ A R
Sbjct: 102 DHKTIGGREIRIVFAEENR 120
>gi|197128630|gb|ACH45128.1| putative cold inducible RNA binding protein variant 2c
[Taeniopygia guttata]
Length = 175
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 50/75 (66%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L V L++ T L +VF + G++ ++ + +DR T+ SRGF FV F + DA+DA+ AM
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 76 DGRMLDGRELRVQMA 90
+G+ +DGR++RV A
Sbjct: 68 NGKSVDGRQIRVDQA 82
>gi|390596289|gb|EIN05691.1| RNA-binding domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 779
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 53/98 (54%)
Query: 20 NLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAMDGRM 79
NL + T DL F R G + ++IP D T++S+G A+++F +DA DA DA+D
Sbjct: 267 NLAFTCTEADLEEHFRRFGAISQVHIPLDHATKQSKGLAYIKFAKAQDAVDAYDALDKTS 326
Query: 80 LDGRELRVQMARYGRPPSSSRSRGGRDRDRRRDRSRSR 117
GR L + A +PP + G+ + +++++ R
Sbjct: 327 FQGRLLHILPAVERKPPPEVQDADGKKKTVKQEKAAQR 364
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
+ V N+ + T D+R +F G++ + +P+ +F SRGFAF+ F + +AE+A +A+
Sbjct: 662 MIVKNVPFEATKKDIRELFGAHGQLKSVRLPK-KFDHRSRGFAFLDFVSRHEAENAYEAL 720
Query: 76 DGRMLDGRELRVQMA 90
L GR L ++ A
Sbjct: 721 KHTHLLGRHLVLEWA 735
Score = 39.3 bits (90), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 5/86 (5%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYI-----PRDRFTRESRGFAFVRFFDKRDA 68
+L V NL + TT + L ++ + P++ R S G+ FV F DK A
Sbjct: 558 TTLFVKNLAFSTTSERLTQLLRHLPSFAFARVQTKPDPKNPNGRLSMGYGFVGFKDKESA 617
Query: 69 EDALDAMDGRMLDGRELRVQMARYGR 94
+ + ++ G ++DG L V+ A G+
Sbjct: 618 KKGMKSLQGTVVDGHALSVKWAGRGQ 643
>gi|301774570|ref|XP_002922705.1| PREDICTED: splicing factor, arginine/serine-rich 13B-like
[Ailuropoda melanoleuca]
Length = 269
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 47/72 (65%), Gaps = 7/72 (9%)
Query: 27 PDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR-------FFDKRDAEDALDAMDGRM 79
P+DLRR F R G + D+YIP D +TR RGFA+V+ F D RDAEDAL ++ +
Sbjct: 24 PEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQYPLFYFIFEDVRDAEDALYNLNRKW 83
Query: 80 LDGRELRVQMAR 91
+ GR++ +Q A+
Sbjct: 84 VCGRQIEIQFAQ 95
>gi|326504506|dbj|BAJ91085.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326508622|dbj|BAJ95833.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 239
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 70/146 (47%), Gaps = 12/146 (8%)
Query: 9 RIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDA 68
R L V N++ +D+R FE+ G + D+Y+PR+ T+E RGF FV+F DA
Sbjct: 51 RPSAPTGLLVRNISLTARLEDIRGPFEQFGPIKDVYLPRNFHTKELRGFGFVKFRHPEDA 110
Query: 69 EDALDAMDGRMLDGRELRVQMARYGRPPSSSRSRGGRDRDRRRDRSRSRD----RRYTRS 124
A M+ +++ GRE+ + A +R R R RSR D RR + S
Sbjct: 111 AYAKQEMNHQVICGREITIVFA--------EENRKTPQEMRFRTRSRHMDGNYRRRQSMS 162
Query: 125 RSFSSRSRSGSKSPRKARSKSIDRDN 150
RS R S S P R S DRDN
Sbjct: 163 RSPRPRYPSYSPEPSPVRQNSRDRDN 188
>gi|449273022|gb|EMC82651.1| Cold-inducible RNA-binding protein [Columba livia]
Length = 153
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 50/75 (66%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L V L++ T L +VF + G++ ++ + +DR T+ SRGF FV F + DA+DA+ AM
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 76 DGRMLDGRELRVQMA 90
+G+ +DGR++RV A
Sbjct: 68 NGKSVDGRQIRVDQA 82
>gi|116793427|gb|ABK26743.1| unknown [Picea sitchensis]
Length = 252
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 49/77 (63%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
L V N++ P+DLR FER G V D+Y+P++ +TRE RGF FV++ + DA +A
Sbjct: 55 TGLLVRNISLDARPEDLRIPFERFGPVKDVYLPKNFYTREPRGFGFVKYRNHDDAAEAKR 114
Query: 74 AMDGRMLDGRELRVQMA 90
M+ +++ GRE+ + A
Sbjct: 115 HMNHQVIGGREISIVFA 131
>gi|403178034|ref|XP_003336468.2| hypothetical protein PGTG_18139 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375173310|gb|EFP92049.2| hypothetical protein PGTG_18139 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 705
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 57/83 (68%), Gaps = 2/83 (2%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L V +L + T DD+R+VF+ G++ + + RD+ T +S+G+AFV+F + DA++A++ M
Sbjct: 452 LYVGSLNFNLTDDDIRQVFQPFGDIEYVDLHRDQITGKSKGYAFVQFKNMHDAKNAMEKM 511
Query: 76 DGRMLDGRELRVQMARYGRPPSS 98
+G L GR LRV++ +PP++
Sbjct: 512 NGFQLAGRALRVEIK--AQPPAA 532
Score = 35.4 bits (80), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Query: 13 MVSLKVDNLTYRTTPDDLRRVFER-CGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDA 71
M S+ V L+ R +L + FE+ G+V D + DR +R S+G +V F + + A
Sbjct: 323 MRSVFVSQLSARVGDRELFQFFEQQAGKVRDARLITDRISRRSKGVGYVEFRELESVQKA 382
Query: 72 LDAMDGRMLDGRELRVQ 88
L A+ G L G + VQ
Sbjct: 383 L-ALTGTKLLGLPVMVQ 398
>gi|403175151|ref|XP_003889057.1| hypothetical protein PGTG_22242 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375171476|gb|EHS64385.1| hypothetical protein PGTG_22242 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 705
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 57/83 (68%), Gaps = 2/83 (2%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L V +L + T DD+R+VF+ G++ + + RD+ T +S+G+AFV+F + DA++A++ M
Sbjct: 452 LYVGSLNFNLTDDDIRQVFQPFGDIEYVDLHRDQITGKSKGYAFVQFKNMHDAKNAMEKM 511
Query: 76 DGRMLDGRELRVQMARYGRPPSS 98
+G L GR LRV++ +PP++
Sbjct: 512 NGFQLAGRALRVEIK--AQPPAA 532
Score = 35.0 bits (79), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Query: 13 MVSLKVDNLTYRTTPDDLRRVFER-CGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDA 71
M S+ V L+ R +L + FE+ G+V D + DR +R S+G +V F + + A
Sbjct: 323 MRSVFVSQLSARVGDRELFQFFEQQAGKVRDARLITDRISRRSKGVGYVEFRELESVQKA 382
Query: 72 LDAMDGRMLDGRELRVQ 88
L A+ G L G + VQ
Sbjct: 383 L-ALTGTKLLGLPVMVQ 398
>gi|340376167|ref|XP_003386605.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1-like [Amphimedon queenslandica]
Length = 229
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 57/94 (60%), Gaps = 1/94 (1%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
++ V NL Y T +DL ++FE+ G++G + + +D+ RESRG AF+ F DK A A+
Sbjct: 11 TVYVSNLPYCLTNNDLHKIFEKFGKIGKVTVVKDKEKRESRGVAFILFIDKMAAARAVQI 70
Query: 75 MDGRMLDGRELRVQMAR-YGRPPSSSRSRGGRDR 107
M+ R + GR L+ +A+ GR P + + +D+
Sbjct: 71 MNDREMFGRTLKCSIAKDNGRAPEFIKRKIYKDK 104
>gi|351699563|gb|EHB02482.1| 35 kDa SR repressor protein, partial [Heterocephalus glaber]
Length = 246
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 47/71 (66%), Gaps = 6/71 (8%)
Query: 27 PDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR------FFDKRDAEDALDAMDGRML 80
P+DLRR F R G + D+YIP D +TR RGFA+V+ F D RDAEDAL ++ + +
Sbjct: 2 PEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQYPLFFIFEDVRDAEDALYNLNRKWV 61
Query: 81 DGRELRVQMAR 91
GR++ +Q A+
Sbjct: 62 CGRQIEIQFAQ 72
>gi|148235865|ref|NP_001079794.1| cold-inducible RNA-binding protein B [Xenopus laevis]
gi|82247034|sp|Q9DED4.1|CIRBB_XENLA RecName: Full=Cold-inducible RNA-binding protein B; AltName:
Full=Cold-inducible RNA-binding protein 2;
Short=xCIRP2; AltName: Full=Glycine-rich RNA-binding
protein CIRP-B
gi|11761319|dbj|BAB19129.1| cold-inducible RNA binding protein 2 [Xenopus laevis]
gi|32450232|gb|AAH54250.1| Xcirp2 protein [Xenopus laevis]
Length = 166
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 50/75 (66%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L + L + T + L +VF + G++ ++ + +DR T+ SRGF FV F + DA+DA+ AM
Sbjct: 7 LFIGGLNFDTNEESLEQVFSKYGQISEVVVVKDRETKRSRGFGFVTFENPDDAKDAMMAM 66
Query: 76 DGRMLDGRELRVQMA 90
+G+ +DGR++RV A
Sbjct: 67 NGKAVDGRQIRVDQA 81
>gi|355749288|gb|EHH53687.1| hypothetical protein EGM_14374, partial [Macaca fascicularis]
Length = 148
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 64/127 (50%), Gaps = 15/127 (11%)
Query: 29 DLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAMDGRMLDGRELRVQ 88
DL F R G + D+Y+P D +T RG A+V+ D RDAEDAL +D + + G ++R+
Sbjct: 23 DLWHEFGRYGPIVDVYVPLDFYTHCPRGVAYVQLEDVRDAEDALHNLDRKWICGCQMRI- 81
Query: 89 MARYGRPPSSSRSRGGRD----------RDRRRDRSRSRDRRYTRSRSFSSRSRSGSKSP 138
GRPP+ +++ GR R RSRSR Y RS S R + P
Sbjct: 82 ----GRPPNQMKAKEGRSVYSSSRYDSRSQRYERRSRSRTFIYIYRRSNSPRKGGWTGRP 137
Query: 139 RKARSKS 145
+RS S
Sbjct: 138 SCSRSHS 144
>gi|331242735|ref|XP_003334013.1| RNA-binding protein rsd1 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 546
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 57/83 (68%), Gaps = 2/83 (2%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L V +L + T DD+R+VF+ G++ + + RD+ T +S+G+AFV+F + DA++A++ M
Sbjct: 426 LYVGSLNFNLTDDDIRQVFQPFGDIEYVDLHRDQITGKSKGYAFVQFKNMHDAKNAMEKM 485
Query: 76 DGRMLDGRELRVQMARYGRPPSS 98
+G L GR LRV++ +PP++
Sbjct: 486 NGFQLAGRALRVEIK--AQPPAA 506
>gi|422304104|ref|ZP_16391453.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9806]
gi|389790787|emb|CCI13324.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9806]
Length = 97
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 55/97 (56%), Gaps = 1/97 (1%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
+S+ V NL + DD+ VF+ G++ +++P DR T + RGFAFV + A+
Sbjct: 1 MSIYVGNLPFEVDQDDVVEVFKEYGKIKRVHLPMDRETGKKRGFAFVEMETPEEEAKAIA 60
Query: 74 AMDGRMLDGRELRVQMARYGRPPSSSRSRGGRDRDRR 110
A+DG GREL+V AR R P S G R+RDRR
Sbjct: 61 ALDGAQWMGRELKVNQARE-REPKPSFGGGNRNRDRR 96
>gi|291396606|ref|XP_002714518.1| PREDICTED: serine-arginine repressor protein-like [Oryctolagus
cuniculus]
Length = 248
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 47/72 (65%), Gaps = 7/72 (9%)
Query: 27 PDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR-------FFDKRDAEDALDAMDGRM 79
P+DLRR F R G + D+YIP D +TR RGFA+V+ F D RDAEDAL ++ +
Sbjct: 3 PEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQYPLFYFIFEDVRDAEDALYNLNRKW 62
Query: 80 LDGRELRVQMAR 91
+ GR++ +Q A+
Sbjct: 63 VCGRQIEIQFAQ 74
>gi|148695099|gb|EDL27046.1| mCG129611 [Mus musculus]
Length = 172
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 67/146 (45%), Gaps = 14/146 (9%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L V L + T L F G + ++ + +DR T+ S GF F+ F + A DA+ AM
Sbjct: 27 LVVGGLNFNTHEQALENYFSSFGPISEVVVVKDRETQRSWGFGFITFTNPEHASDAMRAM 86
Query: 76 DGRMLDGRELRVQMARYGRPPSSSR-----------SRGGRDRDRRRDRSRSRDRRYTRS 124
+G LDGR++RV A G+ SR SRGGRD+ R S+ Y
Sbjct: 87 NGESLDGRQIRVDHA--GKSARGSRGGAFGGRGHSYSRGGRDQGYGSGRYDSQPGEYGYG 144
Query: 125 RSFSSRSRSGSKSPRKARSKSIDRDN 150
+ SR SGS+ S RDN
Sbjct: 145 YGW-SRDYSGSQGGYDCYSGGNYRDN 169
>gi|410959688|ref|XP_003986434.1| PREDICTED: serine/arginine-rich splicing factor 12 [Felis catus]
Length = 285
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 47/72 (65%), Gaps = 7/72 (9%)
Query: 27 PDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR-------FFDKRDAEDALDAMDGRM 79
P+DLRR F R G + D+YIP D +TR RGFA+V+ F D RDAEDAL ++ +
Sbjct: 40 PEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQYPLFYFIFEDVRDAEDALYNLNRKW 99
Query: 80 LDGRELRVQMAR 91
+ GR++ +Q A+
Sbjct: 100 VCGRQIEIQFAQ 111
>gi|159163576|pdb|1X5S|A Chain A, Solution Structure Of Rrm Domain In A18 Hnrnp
Length = 102
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 50/75 (66%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L V L++ T L +VF + G++ ++ + +DR T+ SRGF FV F + DA+DA+ AM
Sbjct: 15 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 74
Query: 76 DGRMLDGRELRVQMA 90
+G+ +DGR++RV A
Sbjct: 75 NGKSVDGRQIRVDQA 89
>gi|397504738|ref|XP_003822938.1| PREDICTED: serine/arginine-rich splicing factor 12 [Pan paniscus]
gi|426353976|ref|XP_004044448.1| PREDICTED: serine/arginine-rich splicing factor 12 [Gorilla
gorilla gorilla]
Length = 257
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 47/72 (65%), Gaps = 7/72 (9%)
Query: 27 PDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR-------FFDKRDAEDALDAMDGRM 79
P+DLRR F R G + D+YIP D +TR RGFA+V+ F D RDAEDAL ++ +
Sbjct: 12 PEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQYPLFYFIFEDVRDAEDALYNLNRKW 71
Query: 80 LDGRELRVQMAR 91
+ GR++ +Q A+
Sbjct: 72 VCGRQIEIQFAQ 83
>gi|225451102|ref|XP_002265951.1| PREDICTED: uncharacterized protein LOC100262434 [Vitis vinifera]
gi|298205010|emb|CBI34317.3| unnamed protein product [Vitis vinifera]
Length = 287
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 47/79 (59%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L V N+ P+DLR FER G V D+Y+P++ +T E RGF FV+F + DA +A +
Sbjct: 46 LLVRNIALDARPEDLRVPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRNAEDAAEAKHHL 105
Query: 76 DGRMLDGRELRVQMARYGR 94
+ ++ GRE+ + A R
Sbjct: 106 NHSVIGGREIAIVFAEENR 124
>gi|403261884|ref|XP_003923335.1| PREDICTED: serine/arginine-rich splicing factor 12 [Saimiri
boliviensis boliviensis]
Length = 271
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 47/72 (65%), Gaps = 7/72 (9%)
Query: 27 PDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR-------FFDKRDAEDALDAMDGRM 79
P+DLRR F R G + D+YIP D +TR RGFA+V+ F D RDAEDAL ++ +
Sbjct: 26 PEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQYPLFYFIFEDVRDAEDALYNLNRKW 85
Query: 80 LDGRELRVQMAR 91
+ GR++ +Q A+
Sbjct: 86 VCGRQIEIQFAQ 97
>gi|403343546|gb|EJY71107.1| RNA binding protein, putative [Oxytricha trifallax]
Length = 388
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 51/81 (62%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
SL V NL+ R DLR +FER G + + D T ESRGFAFV + + +DAED+L
Sbjct: 109 SLYVANLSKRVKDSDLRDLFERYGTIQKCTVVVDPITSESRGFAFVVYDNPQDAEDSLSK 168
Query: 75 MDGRMLDGRELRVQMARYGRP 95
++G L G+E+RV+ ++ +P
Sbjct: 169 LNGYDLLGKEIRVEKSKRLKP 189
>gi|410913465|ref|XP_003970209.1| PREDICTED: RNA-binding motif protein, X chromosome-like isoform 2
[Takifugu rubripes]
Length = 383
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 54/97 (55%), Gaps = 9/97 (9%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L + L TT L + F + G + ++ + +DR T +SRGFAFV F DA+DA M
Sbjct: 10 LFIGGLNTETTEKALEQFFSKYGRIAEVLLMKDRETNKSRGFAFVTFESPSDAKDAAREM 69
Query: 76 DGRMLDGRELRVQMA---------RYGRPPSSSRSRG 103
+G+ LDG+ ++V+ A R G PP SRSRG
Sbjct: 70 NGKSLDGKNIKVEQATKPQFESGGRRGPPPMHSRSRG 106
>gi|222616447|gb|EEE52579.1| hypothetical protein OsJ_34868 [Oryza sativa Japonica Group]
Length = 864
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 46/77 (59%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
VSL V NL P+D++ F++ G V D+Y+P+D T E RGFAFV F DA A
Sbjct: 397 VSLFVSNLPRSCRPEDVQVPFQKFGPVRDVYLPKDYNTGEPRGFAFVEFAHSSDASKARY 456
Query: 74 AMDGRMLDGRELRVQMA 90
M+ +ML GRE+ V A
Sbjct: 457 HMNRKMLSGREISVAFA 473
>gi|332218114|ref|XP_003258205.1| PREDICTED: serine/arginine-rich splicing factor 12 [Nomascus
leucogenys]
Length = 249
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 47/72 (65%), Gaps = 7/72 (9%)
Query: 27 PDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR-------FFDKRDAEDALDAMDGRM 79
P+DLRR F R G + D+YIP D +TR RGFA+V+ F D RDAEDAL ++ +
Sbjct: 4 PEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQYPLFYFIFEDVRDAEDALYNLNRKW 63
Query: 80 LDGRELRVQMAR 91
+ GR++ +Q A+
Sbjct: 64 VCGRQIEIQFAQ 75
>gi|384916047|ref|ZP_10016247.1| RNA-binding protein (RRM domain) (fragment) [Methylacidiphilum
fumariolicum SolV]
gi|384526575|emb|CCG92118.1| RNA-binding protein (RRM domain) (fragment) [Methylacidiphilum
fumariolicum SolV]
Length = 99
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 50/76 (65%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L V NL +R + +DLR +FE+ G+V +I + D+ T +SRGFAFV + A+ A+D++
Sbjct: 6 LYVGNLPFRISENDLRELFEQYGQVNEINLIVDKMTGQSRGFAFVTMETSQAAQSAIDSL 65
Query: 76 DGRMLDGRELRVQMAR 91
+G + GR++ V A+
Sbjct: 66 NGTSISGRQIVVNEAK 81
>gi|395849978|ref|XP_003797581.1| PREDICTED: serine/arginine-rich splicing factor 12 [Otolemur
garnettii]
Length = 366
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 48/76 (63%), Gaps = 8/76 (10%)
Query: 24 RTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR--------FFDKRDAEDALDAM 75
R P+DLRR F R G + D+YIP D +TR RGFA+V+ F D RDAEDAL +
Sbjct: 117 RARPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQYPLFTLVIFEDVRDAEDALYNL 176
Query: 76 DGRMLDGRELRVQMAR 91
+ + + GR++ +Q A+
Sbjct: 177 NRKWVCGRQIEIQFAQ 192
>gi|425472294|ref|ZP_18851145.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9701]
gi|389881662|emb|CCI37811.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9701]
Length = 97
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 53/97 (54%), Gaps = 1/97 (1%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
+S+ V NL + +D+ VF+ GE+ ++ P DR T+ RGFAFV A+
Sbjct: 1 MSIYVGNLPFEVDQEDVVEVFKEYGEIKRVHFPMDRETKRKRGFAFVEMETPEQEAKAIA 60
Query: 74 AMDGRMLDGRELRVQMARYGRPPSSSRSRGGRDRDRR 110
A+DG GREL+V AR R P S G R+RDRR
Sbjct: 61 ALDGAQWMGRELKVNQAR-EREPKPSFGGGNRNRDRR 96
>gi|30687014|ref|NP_197382.3| SC35-like splicing factor 28 [Arabidopsis thaliana]
gi|91806878|gb|ABE66166.1| 28 kDa SC35-like splicing factor [Arabidopsis thaliana]
gi|332005232|gb|AED92615.1| SC35-like splicing factor 28 [Arabidopsis thaliana]
Length = 236
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Query: 12 GMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDA 71
G L + NL P+DLR FER G + DIY+PR+ +T E RGF FV++ DA +A
Sbjct: 45 GPSGLLIRNLPLDARPNDLRDSFERFGPLKDIYLPRNYYTGEPRGFGFVKYRYAEDAAEA 104
Query: 72 LDAMDGRMLDGRELRVQMARYGR-PPSSSRSRGG 104
+ M+ +++ GRE+ + A R P R+ G
Sbjct: 105 MKRMNHKVIGGREIAIVFAEENRKTPQEMRTTNG 138
>gi|357122439|ref|XP_003562923.1| PREDICTED: uncharacterized protein LOC100844345 [Brachypodium
distachyon]
Length = 206
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 67/124 (54%), Gaps = 13/124 (10%)
Query: 18 VDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAMDG 77
+ NL++ TT + L+ F + G V + + D+F+ SRGFAFV F +K+D E A++ M+G
Sbjct: 11 IGNLSWSTTDESLKDAFRKFGNVTEAKVVLDKFSGRSRGFAFVTFDEKKDMEAAIEDMNG 70
Query: 78 RMLDGRELRVQMARYGRPPSSSRSRGGRDRDRRRDRSRSRDRRYTRSRSFSSRSRSGSKS 137
LDGR + V A +P + R R G DRD RDR DR R G ++
Sbjct: 71 LDLDGRAITVDKA---QPQGAGRDRNG-DRDYDRDRGSRNDR---------GRDSGGGRA 117
Query: 138 PRKA 141
PR +
Sbjct: 118 PRGS 121
>gi|116831499|gb|ABK28702.1| unknown [Arabidopsis thaliana]
Length = 237
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Query: 12 GMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDA 71
G L + NL P+DLR FER G + DIY+PR+ +T E RGF FV++ DA +A
Sbjct: 45 GPSGLLIRNLPLDARPNDLRDSFERFGPLKDIYLPRNYYTGEPRGFGFVKYRYAEDAAEA 104
Query: 72 LDAMDGRMLDGRELRVQMARYGR-PPSSSRSRGG 104
+ M+ +++ GRE+ + A R P R+ G
Sbjct: 105 MKRMNHKVIGGREIAIVFAEENRKTPQEMRTTNG 138
>gi|410913463|ref|XP_003970208.1| PREDICTED: RNA-binding motif protein, X chromosome-like isoform 1
[Takifugu rubripes]
Length = 391
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 54/97 (55%), Gaps = 9/97 (9%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L + L TT L + F + G + ++ + +DR T +SRGFAFV F DA+DA M
Sbjct: 10 LFIGGLNTETTEKALEQFFSKYGRIAEVLLMKDRETNKSRGFAFVTFESPSDAKDAAREM 69
Query: 76 DGRMLDGRELRVQMA---------RYGRPPSSSRSRG 103
+G+ LDG+ ++V+ A R G PP SRSRG
Sbjct: 70 NGKSLDGKNIKVEQATKPQFESGGRRGPPPMHSRSRG 106
>gi|84996673|ref|XP_953058.1| RNA-binding protein [Theileria annulata strain Ankara]
gi|65304054|emb|CAI76433.1| RNA-binding protein, putative [Theileria annulata]
Length = 245
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 49/80 (61%)
Query: 20 NLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAMDGRM 79
NL + T+P +R FE+ G++ D+Y+P D TR RGF FV F+DK DA DA+ AMD
Sbjct: 13 NLRFSTSPQVVREAFEKFGKIRDVYLPLDFNTRRPRGFGFVEFYDKADALDAVRAMDNTE 72
Query: 80 LDGRELRVQMARYGRPPSSS 99
LDG + +A+ R SS
Sbjct: 73 LDGSVITCCIAQDRRKSPSS 92
>gi|21388662|dbj|BAC00787.1| glycine-rich RNA-binding protein [Physcomitrella patens]
Length = 155
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L V L + TT D+++ F GEV ++ I DR T SRGF FV F +DAE AL A+
Sbjct: 44 LFVGGLAWGTTDDNIKEAFSAFGEVTEVKIICDRDTGRSRGFGFVTFATDQDAEAALQAL 103
Query: 76 DGRMLDGRELRVQMARYGRPPSSSRSRGG 104
DGR L GR +RV A + P +S GG
Sbjct: 104 DGRDLAGRTIRVNYATK-QSPQDRQSGGG 131
>gi|168016725|ref|XP_001760899.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687908|gb|EDQ74288.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 155
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L V L + TT D+++ F GEV ++ I DR T SRGF FV F +DAE AL A+
Sbjct: 44 LFVGGLAWGTTDDNIKEAFSAFGEVTEVKIICDRDTGRSRGFGFVTFATDQDAEAALQAL 103
Query: 76 DGRMLDGRELRVQMARYGRPPSSSRSRGG 104
DGR L GR +RV A + P +S GG
Sbjct: 104 DGRDLAGRTIRVNYATK-QSPQDRQSGGG 131
>gi|425781282|gb|EKV19258.1| hypothetical protein PDIG_04180 [Penicillium digitatum PHI26]
gi|425783364|gb|EKV21218.1| hypothetical protein PDIP_08850 [Penicillium digitatum Pd1]
Length = 162
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 54/96 (56%), Gaps = 2/96 (2%)
Query: 13 MVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDAL 72
M L V L++ T+ D LR F++ GE+ + + +DR T SRGF FVRF +A+ AL
Sbjct: 1 MSKLFVHGLSWHTSDDTLREGFQQFGEIQEAIVVKDRATLRSRGFGFVRFATDAEADSAL 60
Query: 73 DAMDGRMLDGRELRVQMA--RYGRPPSSSRSRGGRD 106
AM+ + DGR +RV A R RP RGG +
Sbjct: 61 GAMNNQEFDGRVIRVDKAFDRPQRPEGGFHGRGGYN 96
>gi|22298986|ref|NP_682233.1| RNA binding protein [Thermosynechococcus elongatus BP-1]
gi|22295168|dbj|BAC08995.1| RNA binding protein [Thermosynechococcus elongatus BP-1]
Length = 90
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 51/88 (57%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
++L + NL+Y T +DLR VFE+ G + I +P DR T + RGFAFV D+ A+D
Sbjct: 1 MTLYIGNLSYEATENDLREVFEKYGAIRRIVLPVDRETGKRRGFAFVELADETQEAVAID 60
Query: 74 AMDGRMLDGRELRVQMARYGRPPSSSRS 101
+DG GR L+V A+ +P S S
Sbjct: 61 DLDGATWLGRVLKVNKAKPKQPGGQSNS 88
>gi|32398853|emb|CAD98563.1| splicing factor, possible [Cryptosporidium parvum]
Length = 330
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
SL + +L + T +RR FER G + D+Y+P D +R RGF FV + ++ DA AL+
Sbjct: 14 SLLIRSLRFDTPTSLVRREFERFGAIRDVYLPLDYRSRRPRGFGFVEYVEEEDARAALEK 73
Query: 75 MDGRMLDGRELRVQMARYGR-PPSSSRSR 102
MDG LDG + V A+ GR P S R R
Sbjct: 74 MDGATLDGVTINVTFAQEGRKSPESMRHR 102
>gi|357478559|ref|XP_003609565.1| Splicing factor, arginine/serine-rich 13A [Medicago truncatula]
gi|355510620|gb|AES91762.1| Splicing factor, arginine/serine-rich 13A [Medicago truncatula]
Length = 314
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 47/79 (59%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L V NL P+DLR FER G V D+Y+PR+ +T E RGF FV++ DA +A +
Sbjct: 50 LLVRNLPLDARPEDLRGPFERYGPVKDVYLPRNYYTGEPRGFGFVKYRHGEDAAEAKQQL 109
Query: 76 DGRMLDGRELRVQMARYGR 94
+ ++ GRE+R+ A R
Sbjct: 110 NHTIIGGREIRIVFAEENR 128
>gi|77166221|ref|YP_344746.1| RNA-binding protein, RNP-1 [Nitrosococcus oceani ATCC 19707]
gi|254435869|ref|ZP_05049376.1| RNA-binding protein [Nitrosococcus oceani AFC27]
gi|76884535|gb|ABA59216.1| RNA-binding protein, RNP-1 [Nitrosococcus oceani ATCC 19707]
gi|207088980|gb|EDZ66252.1| RNA-binding protein [Nitrosococcus oceani AFC27]
Length = 119
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 59/109 (54%), Gaps = 6/109 (5%)
Query: 13 MVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDAL 72
+V++ V NL+Y+ T +DLR FE GEV + D+F+ S+GF FV K DAE A+
Sbjct: 17 IVNIYVGNLSYQVTDEDLRAAFENYGEVSSAKVIVDKFSNRSKGFGFVEMASKEDAEAAI 76
Query: 73 DAMDGRMLDGRELRVQMARYGRPPSSSRSRGGRDRDRRRDRSRSRDRRY 121
M + GR++ V A RP + S + GG RR D R RR+
Sbjct: 77 KEMHDSDIKGRQVVVNEA---RPRNESSNNGGF---RRNDGFGDRQRRF 119
>gi|449541007|gb|EMD31994.1| hypothetical protein CERSUDRAFT_119299 [Ceriporiopsis subvermispora
B]
Length = 291
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 53/90 (58%)
Query: 2 SYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
S GRP + M +L+V N++ T +DLR +F R G V +Y+ RDR T +GFAFV
Sbjct: 197 SMGRPGGSRDDMPTLRVTNISEDTQENDLRELFSRFGRVARVYVGRDRETGAGKGFAFVS 256
Query: 62 FFDKRDAEDALDAMDGRMLDGRELRVQMAR 91
F K DA+ A++ M GR D L VQ ++
Sbjct: 257 FESKGDAQLAMEKMHGRGYDNLILSVQWSQ 286
>gi|395534618|ref|XP_003769337.1| PREDICTED: serine/arginine-rich splicing factor 12 [Sarcophilus
harrisii]
Length = 317
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 47/74 (63%), Gaps = 9/74 (12%)
Query: 27 PDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR---------FFDKRDAEDALDAMDG 77
P+DLRR F R G + D+YIP D +TR RGFA+V+ F D RDAEDAL ++
Sbjct: 83 PEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQYPLFHSLVIFEDVRDAEDALYNLNR 142
Query: 78 RMLDGRELRVQMAR 91
+ + GR++ +Q A+
Sbjct: 143 KWVCGRQIEIQFAQ 156
>gi|71028770|ref|XP_764028.1| hypothetical protein [Theileria parva strain Muguga]
gi|68350982|gb|EAN31745.1| hypothetical protein, conserved [Theileria parva]
Length = 245
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 46/72 (63%)
Query: 20 NLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAMDGRM 79
NL + T+P +R FE+ G++ D+Y+P D TR RGF FV F+DK DA DA+ AMD
Sbjct: 13 NLRFSTSPQVVREAFEKFGKIRDVYLPLDFNTRRPRGFGFVEFYDKADALDAVRAMDNTE 72
Query: 80 LDGRELRVQMAR 91
LDG + +A+
Sbjct: 73 LDGSVITCCIAQ 84
>gi|67623223|ref|XP_667894.1| splicing factor [Cryptosporidium hominis TU502]
gi|54659062|gb|EAL37659.1| splicing factor [Cryptosporidium hominis]
Length = 330
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
SL + +L + T +RR FER G + D+Y+P D +R RGF FV + ++ DA AL+
Sbjct: 14 SLLIRSLRFDTPTSLVRREFERFGAIRDVYLPLDYRSRRPRGFGFVEYVEEEDARAALEK 73
Query: 75 MDGRMLDGRELRVQMARYGR-PPSSSRSR 102
MDG LDG + V A+ GR P S R R
Sbjct: 74 MDGATLDGVTINVTFAQEGRKSPESMRHR 102
>gi|348550387|ref|XP_003461013.1| PREDICTED: LOW QUALITY PROTEIN: cold-inducible RNA-binding
protein-like [Cavia porcellus]
Length = 173
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 49/75 (65%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L + L++ T L VF + G++ ++ + +DR T+ SRGF FV F + DA+DA+ AM
Sbjct: 8 LFIGGLSFDTNEQSLEEVFSKYGQIAEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 76 DGRMLDGRELRVQMA 90
+G+ +DGR++RV A
Sbjct: 68 NGKSVDGRQIRVDQA 82
>gi|426235141|ref|XP_004011549.1| PREDICTED: serine/arginine-rich splicing factor 12 [Ovis aries]
Length = 301
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 47/71 (66%), Gaps = 5/71 (7%)
Query: 26 TPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR-----FFDKRDAEDALDAMDGRML 80
T +DLRR F R G + D+YIP D +TR RGFA+V+ F D RDAEDAL ++ + +
Sbjct: 57 TSEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQYPLFIFEDVRDAEDALYNLNRKWV 116
Query: 81 DGRELRVQMAR 91
GR++ +Q A+
Sbjct: 117 CGRQIEIQFAQ 127
>gi|348563359|ref|XP_003467475.1| PREDICTED: serine/arginine-rich splicing factor 12-like [Cavia
porcellus]
Length = 422
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 47/71 (66%), Gaps = 6/71 (8%)
Query: 27 PDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR------FFDKRDAEDALDAMDGRML 80
P+DLRR F R G + D+YIP D +TR RGFA+V+ F D RDAEDAL ++ + +
Sbjct: 178 PEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQYPLFFIFEDVRDAEDALYNLNRKWV 237
Query: 81 DGRELRVQMAR 91
GR++ +Q A+
Sbjct: 238 CGRQIEIQFAQ 248
>gi|262199927|ref|YP_003271136.1| RNP-1 like RNA-binding protein [Haliangium ochraceum DSM 14365]
gi|262083274|gb|ACY19243.1| RNP-1 like RNA-binding protein [Haliangium ochraceum DSM 14365]
Length = 207
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 55/90 (61%), Gaps = 8/90 (8%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCG-EVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
L V NL+Y TT + LR VFE G EV + I DR T SRGFAFV+ + A +A+++
Sbjct: 5 LYVGNLSYSTTEEALRSVFEEGGKEVRSVAIILDRETGRSRGFAFVQMASEDAAREAMES 64
Query: 75 MDGRMLDGRELRVQMARYGRPPSSSRSRGG 104
+DGR LDGR++R+ AR R RGG
Sbjct: 65 LDGRELDGRQMRITEAR-------ERERGG 87
>gi|66475620|ref|XP_627626.1| RRM domain containing protein; T22E16.120 Sc35-like splicing factor
[Cryptosporidium parvum Iowa II]
gi|46229295|gb|EAK90144.1| RRM domain containing protein; T22E16.120 Sc35-like splicing factor
[Cryptosporidium parvum Iowa II]
Length = 344
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
SL + +L + T +RR FER G + D+Y+P D +R RGF FV + ++ DA AL+
Sbjct: 28 SLLIRSLRFDTPTSLVRREFERFGAIRDVYLPLDYRSRRPRGFGFVEYVEEEDARAALEK 87
Query: 75 MDGRMLDGRELRVQMARYGR-PPSSSRSR 102
MDG LDG + V A+ GR P S R R
Sbjct: 88 MDGATLDGVTINVTFAQEGRKSPESMRHR 116
>gi|66357806|ref|XP_626081.1| SPAC25G10.01-like RRM domain containing protein [Cryptosporidium
parvum Iowa II]
gi|46227164|gb|EAK88114.1| SPAC25G10.01-like RRM domain containing protein [Cryptosporidium
parvum Iowa II]
gi|323510225|dbj|BAJ78006.1| cgd5_1330 [Cryptosporidium parvum]
Length = 253
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 75/151 (49%), Gaps = 8/151 (5%)
Query: 8 PRIE----GMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFF 63
P+IE +L V L+ +T DDLRR+FE GEV D ++ + + ESR F FV
Sbjct: 61 PQIERSNDPSCTLYVCRLSLKTKEDDLRRLFEDYGEVTDCHLVTNPLSGESRCFGFVTMG 120
Query: 64 DKRDAEDALDAMDGRMLDGRELRVQMARYGRP--PSSSRSRGGRDRDRRRDRSRSRDRRY 121
++ +A A DA+DG+ L+V+ AR +P P+ +G + R + + R
Sbjct: 121 NEEEAARAKDALDGKEYQDASLKVETARRAKPYDPTPGEYKGPQYRSIKYNSRTGYSRSS 180
Query: 122 TRSRSF--SSRSRSGSKSPRKARSKSIDRDN 150
R SF S+RSR P +R +R N
Sbjct: 181 HRGNSFRHSTRSRYDYPPPSHSRGDQYNRHN 211
>gi|349804063|gb|AEQ17504.1| putative cold-inducible rna-binding protein b [Hymenochirus
curtipes]
Length = 123
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 50/75 (66%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L + L + T D L +VF + G++ ++ + +DR T+ SRGF FV F + DA+DA+ AM
Sbjct: 6 LFIGGLNFDTNEDGLEQVFGKYGQISEVVVVKDRETKRSRGFGFVTFENPDDAKDAMMAM 65
Query: 76 DGRMLDGRELRVQMA 90
+G+ +DGR++RV A
Sbjct: 66 NGKAVDGRQIRVDQA 80
>gi|47225325|emb|CAG09825.1| unnamed protein product [Tetraodon nigroviridis]
Length = 391
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 54/97 (55%), Gaps = 9/97 (9%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L + L TT L + F + G + ++ + +DR T +SRGFAFV F DA+DA M
Sbjct: 10 LFIGGLNTETTEKALEQFFSKYGRIAEVILMKDRETNKSRGFAFVTFESPSDAKDAAREM 69
Query: 76 DGRMLDGRELRVQMA---------RYGRPPSSSRSRG 103
+G+ LDG+ ++V+ A R G PP SRSRG
Sbjct: 70 NGKSLDGKNIKVEQATKPQFESGGRRGPPPMHSRSRG 106
>gi|449432785|ref|XP_004134179.1| PREDICTED: uncharacterized protein LOC101216537 [Cucumis sativus]
gi|449495419|ref|XP_004159835.1| PREDICTED: uncharacterized LOC101216537 [Cucumis sativus]
Length = 248
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 47/79 (59%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L V NL P+DLR FER G V D+Y+P++ +T E RGF FV+F DA +A +
Sbjct: 52 LLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRFAEDAAEAKQQL 111
Query: 76 DGRMLDGRELRVQMARYGR 94
+ ++ GRE+R+ A R
Sbjct: 112 NHTVIGGREIRIVFAEENR 130
>gi|73973899|ref|XP_532229.2| PREDICTED: serine/arginine-rich splicing factor 12 [Canis lupus
familiaris]
Length = 326
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 54/88 (61%), Gaps = 10/88 (11%)
Query: 12 GMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR--------FF 63
G+++L +R P+DLRR F R G + D+YIP D +TR RGFA+V+ F
Sbjct: 67 GLLNLLPAQPFFR--PEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQYPLFSLVIFE 124
Query: 64 DKRDAEDALDAMDGRMLDGRELRVQMAR 91
D RDAEDAL ++ + + GR++ +Q A+
Sbjct: 125 DVRDAEDALYNLNRKWVCGRQIEIQFAQ 152
>gi|428203095|ref|YP_007081684.1| RRM domain-containing RNA-binding protein [Pleurocapsa sp. PCC
7327]
gi|427980527|gb|AFY78127.1| RRM domain-containing RNA-binding protein [Pleurocapsa sp. PCC
7327]
Length = 99
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 54/98 (55%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
+S+ V NL+Y T +DL RVF+ G V + +P DR T RGFAFV + + A++
Sbjct: 1 MSIYVGNLSYEVTQEDLERVFKEYGTVNRVQMPTDRETGRPRGFAFVEMGTEAEETTAIE 60
Query: 74 AMDGRMLDGRELRVQMARYGRPPSSSRSRGGRDRDRRR 111
A+DG GR+L+V A+ SS S G R RR
Sbjct: 61 ALDGAQWMGRDLKVNKAKPREERGSSGSWGNNRRSNRR 98
>gi|326427558|gb|EGD73128.1| hypothetical protein PTSG_04841 [Salpingoeca sp. ATCC 50818]
Length = 285
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 43/76 (56%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L V NL Y T D+ F + G+V D+++P R T RGF FV F D+ +AEDA M
Sbjct: 82 LFVGNLNYDTKVSDMEEAFGKFGKVKDVFLPMHRVTGTCRGFGFVTFADRTEAEDAEKGM 141
Query: 76 DGRMLDGRELRVQMAR 91
+G GRE+ V AR
Sbjct: 142 NGTTFLGREVAVNFAR 157
>gi|440714448|ref|ZP_20895027.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula baltica SWK14]
gi|436440644|gb|ELP33948.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula baltica SWK14]
Length = 196
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 50/79 (63%)
Query: 13 MVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDAL 72
+ ++ V NL+++ T ++LR FE+ GEV + I DR T SRGFAFV D A+DA+
Sbjct: 54 VTNIYVGNLSFKATEEELRGAFEQYGEVSAVNIIMDRETGRSRGFAFVEMADAEGAKDAI 113
Query: 73 DAMDGRMLDGRELRVQMAR 91
+ ++G +DGR + V AR
Sbjct: 114 ENLNGHEIDGRSVTVNEAR 132
>gi|421614043|ref|ZP_16055112.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula baltica SH28]
gi|408495250|gb|EKJ99839.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula baltica SH28]
Length = 189
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 50/79 (63%)
Query: 13 MVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDAL 72
+ ++ V NL+++ T ++LR FE+ GEV + I DR T SRGFAFV D A+DA+
Sbjct: 54 VTNIYVGNLSFKATEEELRGAFEQYGEVSAVNIIMDRETGRSRGFAFVEMADAEGAKDAI 113
Query: 73 DAMDGRMLDGRELRVQMAR 91
+ ++G +DGR + V AR
Sbjct: 114 ENLNGHEIDGRSVTVNEAR 132
>gi|417304381|ref|ZP_12091404.1| protein containing RNA recognition motif, RNP-1 domains
[Rhodopirellula baltica WH47]
gi|449136828|ref|ZP_21772190.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula europaea 6C]
gi|327539333|gb|EGF25954.1| protein containing RNA recognition motif, RNP-1 domains
[Rhodopirellula baltica WH47]
gi|448884533|gb|EMB15023.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula europaea 6C]
Length = 195
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 50/79 (63%)
Query: 13 MVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDAL 72
+ ++ V NL+++ T ++LR FE+ GEV + I DR T SRGFAFV D A+DA+
Sbjct: 54 VTNIYVGNLSFKATEEELRGAFEQYGEVSAVNIIMDRETGRSRGFAFVEMADAEGAKDAI 113
Query: 73 DAMDGRMLDGRELRVQMAR 91
+ ++G +DGR + V AR
Sbjct: 114 ENLNGHEIDGRSVTVNEAR 132
>gi|448878234|gb|AGE46080.1| arginine/serine-rich splicing factor SCL28 transcript III [Zea
mays]
Length = 232
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 75/155 (48%), Gaps = 19/155 (12%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L + N++ P+D+R FE+ G + D+Y+PR+ TRE RGF FV+F DA A M
Sbjct: 59 LLIRNISLTARPEDIRATFEQFGPIKDVYLPRNFHTRELRGFGFVKFRYPEDAAVAKREM 118
Query: 76 DGRMLDGRELRVQMARYGRPPSSSRSRGGRDRDRRRDRSRSRDRRYTRSRS--------- 126
+++ GRE+ + A +R R R R R D RYTR
Sbjct: 119 HHQVIGGREISIVYA------EENRKTPQEMRMRTRTSGRYMDERYTRLSRSPRSRSHFR 172
Query: 127 --FSSRSRSGSKSPRKARSKSIDRDNKHER-NGRS 158
F R R S SP+ + S RD++H R +GRS
Sbjct: 173 RDFRGRERPDSYSPQYSHSPR-PRDSRHHRSDGRS 206
>gi|428768452|ref|YP_007160242.1| RNP-1 like RNA-binding protein [Cyanobacterium aponinum PCC 10605]
gi|428682731|gb|AFZ52198.1| RNP-1 like RNA-binding protein [Cyanobacterium aponinum PCC 10605]
Length = 101
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 52/97 (53%), Gaps = 1/97 (1%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
+S+ V NL Y T +DL VF G V ++IP DR T RGFAFV + E A+D
Sbjct: 1 MSIYVGNLPYEVTSEDLMEVFAEYGTVSRVHIPTDRETGRMRGFAFVEMENDNQEESAID 60
Query: 74 AMDGRMLDGRELRVQMARYGRPPSSSRSRGGRDRDRR 110
A+DG RELRV A+ R S +RGG R R
Sbjct: 61 ALDGAEWMKRELRVNKAK-PREKRDSFNRGGGQRKER 96
>gi|284929630|ref|YP_003422152.1| RRM domain-containing RNA-binding protein [cyanobacterium UCYN-A]
gi|284810074|gb|ADB95771.1| RRM domain-containing RNA-binding protein [cyanobacterium UCYN-A]
Length = 96
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
+S+ V NL+Y T +DL VF GEV ++IP DR T RGFAFV E A+
Sbjct: 1 MSIYVGNLSYDVTKEDLNEVFTDYGEVKRVHIPTDRDTGRMRGFAFVEMNSDDQEEQAIS 60
Query: 74 AMDGRMLDGRELRVQMARYGRPPSSSRSRGGRDRDR 109
+DG GR L+V A+ R P S + GGR R+R
Sbjct: 61 TLDGAEWMGRTLKVNKAKE-REPRGSFNGGGRGRER 95
>gi|300176090|emb|CBK23401.2| unnamed protein product [Blastocystis hominis]
Length = 259
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 44/66 (66%)
Query: 29 DLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAMDGRMLDGRELRVQ 88
+++ +F + G V D++IPRD +T + RGFAF+ F ++ AEDA+ +DGR + G + V
Sbjct: 117 EIQNIFSKYGNVHDVHIPRDYYTHKQRGFAFIEFENREQAEDAISHLDGRSVCGSTVSVS 176
Query: 89 MARYGR 94
+A+ R
Sbjct: 177 IAKNNR 182
>gi|46139099|ref|XP_391240.1| hypothetical protein FG11064.1 [Gibberella zeae PH-1]
Length = 127
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Query: 13 MVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDAL 72
M L V NL++ TT + LR+ F GEV D I RDR T +RGF FV F + A A+
Sbjct: 1 MSKLYVGNLSWNTTDETLRQTFSEFGEVTDSIIMRDRDTGRARGFGFVTFSTEEQATAAV 60
Query: 73 DAMDGRMLDGRELRVQMARYGRPP 96
DA++ + LDGR +RV +A RP
Sbjct: 61 DALNEQELDGRRIRVNVAN-ARPA 83
>gi|307106096|gb|EFN54343.1| hypothetical protein CHLNCDRAFT_135593 [Chlorella variabilis]
Length = 224
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 46/77 (59%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
SL V NL + DDLR E+ G V D+Y+P+D +T RG AFV F D+RDAEDA
Sbjct: 11 CSLLVRNLAPDVSGDDLRYAAEKYGRVKDVYVPKDYYTGRPRGIAFVEFDDRRDAEDAKY 70
Query: 74 AMDGRMLDGRELRVQMA 90
MD ML E+ VQ A
Sbjct: 71 GMDRSMLGSGEIAVQFA 87
>gi|325182043|emb|CCA16496.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 193
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 48/77 (62%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
+L V NL +R T +L +F + G + + D +RESRGFAFV F D RDA DA+
Sbjct: 30 NLYVANLAHRVTETELNDLFAKFGRLEKCEVITDPISRESRGFAFVTFEDVRDANDAVQE 89
Query: 75 MDGRMLDGRELRVQMAR 91
++G+ + GR +RV+ AR
Sbjct: 90 LNGKDIQGRRIRVEHAR 106
>gi|238493741|ref|XP_002378107.1| small subunit of nuclear cap-binding protein complex [Aspergillus
flavus NRRL3357]
gi|317157348|ref|XP_003190832.1| nuclear cap-binding protein subunit 2 [Aspergillus oryzae RIB40]
gi|220696601|gb|EED52943.1| small subunit of nuclear cap-binding protein complex [Aspergillus
flavus NRRL3357]
Length = 177
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 59/114 (51%), Gaps = 12/114 (10%)
Query: 6 PPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDK 65
P ++ +L V NL++ TT + + +F +CGEV + + DRFT+ GF FV ++
Sbjct: 40 PTDNLKNATTLYVGNLSFYTTEEQIHELFSKCGEVKRLVMGLDRFTKTPCGFCFVEYYTH 99
Query: 66 RDAEDALDAMDGRMLDGRELRVQMA-------RYGRPPSSSRSRGGRDRDRRRD 112
+DA D L + G LD R +R + +YGR S GG+ RD R+
Sbjct: 100 QDALDCLKYVGGTKLDERIIRTDLDPGFEEGRQYGRGKS-----GGQVRDEYRE 148
>gi|162455777|ref|YP_001618144.1| RNA-binding protein [Sorangium cellulosum So ce56]
gi|161166359|emb|CAN97664.1| RNA-binding protein [Sorangium cellulosum So ce56]
Length = 107
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 46/76 (60%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L V NL+Y T+ + L F GEV ++ +P DR T + RGFAFV ++A A+ +
Sbjct: 5 LYVGNLSYNTSRESLEAAFAGSGEVREVAMPTDRETGQPRGFAFVTMGSAQEANSAISQL 64
Query: 76 DGRMLDGRELRVQMAR 91
+G MLDGR L+V A+
Sbjct: 65 NGMMLDGRSLKVNEAQ 80
>gi|296423836|ref|XP_002841458.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637698|emb|CAZ85649.1| unnamed protein product [Tuber melanosporum]
Length = 156
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 57/105 (54%), Gaps = 12/105 (11%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
+L V NL++ TT + + +F +CGE+ + + DRFT+ GF FV ++ +D DA+
Sbjct: 37 TLYVGNLSFYTTEEQIHELFSKCGEIKRLVMGLDRFTKTPCGFCFVEYYTHKDTLDAMKY 96
Query: 75 MDGRMLDGRELRVQMA-------RYGRPPSSSRSRGGRDRDRRRD 112
+ G LD R +R + +YGR P+ GG+ RD RD
Sbjct: 97 IGGTKLDERIIRTDLDPGFKEGRQYGRGPT-----GGQVRDYYRD 136
>gi|32476441|ref|NP_869435.1| RNA-binding protein [Rhodopirellula baltica SH 1]
gi|32446986|emb|CAD78892.1| RNA-binding protein [Rhodopirellula baltica SH 1]
Length = 206
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 50/79 (63%)
Query: 13 MVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDAL 72
+ ++ V NL+++ T ++LR FE+ GEV + I DR T SRGFAFV D A+DA+
Sbjct: 65 VTNIYVGNLSFKATEEELRGAFEQYGEVSAVNIIMDRETGRSRGFAFVEMADAEGAKDAI 124
Query: 73 DAMDGRMLDGRELRVQMAR 91
+ ++G +DGR + V AR
Sbjct: 125 ENLNGHEIDGRSVTVNEAR 143
>gi|300113043|ref|YP_003759618.1| RNP-1 like RNA-binding protein [Nitrosococcus watsonii C-113]
gi|299538980|gb|ADJ27297.1| RNP-1 like RNA-binding protein [Nitrosococcus watsonii C-113]
Length = 118
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 56/103 (54%), Gaps = 3/103 (2%)
Query: 13 MVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDAL 72
+V++ V NL+Y+ T +DLR FE GEV + D+F+ S+GF FV K DAE A+
Sbjct: 17 IVNIYVGNLSYQVTDEDLRAAFENYGEVSSAKVIVDKFSNRSKGFGFVEMASKEDAETAI 76
Query: 73 DAMDGRMLDGRELRVQMARYGRPPSSSRSRGGRDRDRRRDRSR 115
M + GR++ V A RP + S + G R D DR R
Sbjct: 77 KEMHDSDIKGRQIVVNEA---RPRNESNNGGFRRNDGFGDRQR 116
>gi|224035925|gb|ACN37038.1| unknown [Zea mays]
gi|448878196|gb|AGE46061.1| arginine/serine-rich splicing factor SC32 transcript III [Zea mays]
Length = 284
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 62/116 (53%), Gaps = 3/116 (2%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKR 66
PP I SL V N+++RTT DDL +FERCG+V D++IPRDR T +SRGFAFVR+
Sbjct: 9 PPDIRDTFSLLVLNISFRTTADDLFPLFERCGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
Query: 67 DAEDALDAMDG-RMLDGRELRVQMARYGRPPSSSRSRGGRDRDRRRDRSRSRDRRY 121
+A+ A+D +DG V + GR+ D R + +Y
Sbjct: 69 EAQKAIDRLDGGFFFFDCAPHVGILELLFLIIVDFLGAGRNVDGRNIMVQFA--KY 122
>gi|91202563|emb|CAJ72202.1| rna binding protein [Candidatus Kuenenia stuttgartiensis]
Length = 126
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 52/77 (67%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
+++ NL +TT ++L++VFE G+V + I +D+F+ ESRGF FV + +A+ ALD
Sbjct: 1 MNIYAGNLARQTTEEELKQVFEEFGQVTSVTIIKDKFSGESRGFGFVEMPSRAEAQAALD 60
Query: 74 AMDGRMLDGRELRVQMA 90
+++G+ L+GR L V A
Sbjct: 61 SLNGKDLNGRVLNVNEA 77
>gi|345313668|ref|XP_001512332.2| PREDICTED: cold-inducible RNA-binding protein-like
[Ornithorhynchus anatinus]
Length = 270
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 50/75 (66%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L V L++ T L +VF + G++ ++ + +DR T+ SRGF FV F + DA+DA+ AM
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 76 DGRMLDGRELRVQMA 90
+G+ +DGR++RV A
Sbjct: 68 NGKSVDGRQIRVDQA 82
>gi|428220065|ref|YP_007083537.1| RNP-1 like RNA-binding protein [Pseudanabaena sp. PCC 7367]
gi|427992408|gb|AFY72101.1| RNP-1 like RNA-binding protein [Pseudanabaena sp. PCC 7367]
Length = 83
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 47/78 (60%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
+S+ V NL+Y T +++ VF G V ++Y+P DR T RGF FV D+ + E+A+
Sbjct: 1 MSIYVGNLSYDVTAENITEVFTEYGAVKEVYLPTDRETGRIRGFGFVHMEDEANEEEAIS 60
Query: 74 AMDGRMLDGRELRVQMAR 91
A+DG GR L+V AR
Sbjct: 61 ALDGAEWCGRNLKVNKAR 78
>gi|302340505|ref|YP_003805711.1| RNP-1 like RNA-binding protein [Spirochaeta smaragdinae DSM
11293]
gi|301637690|gb|ADK83117.1| RNP-1 like RNA-binding protein [Spirochaeta smaragdinae DSM
11293]
Length = 88
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 47/76 (61%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
+ V NL Y T + L+ +F + G+V + I DR+T +S+GF FV + AE A+ A+
Sbjct: 5 IYVGNLNYSTREESLQDLFGQYGQVNSVNIITDRYTGQSKGFGFVEMEEMDAAEAAISAL 64
Query: 76 DGRMLDGRELRVQMAR 91
DG LDGRELRV A+
Sbjct: 65 DGTSLDGRELRVNEAK 80
>gi|348501352|ref|XP_003438234.1| PREDICTED: cold-inducible RNA-binding protein A-like [Oreochromis
niloticus]
Length = 183
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 47/75 (62%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L + L++ T D L F + G + + + RD+ T SRGF FV++ + DA+DALDAM
Sbjct: 7 LFIGGLSFETNEDSLAAAFGKYGTIEKVDVIRDKETGRSRGFGFVKYDNAEDAKDALDAM 66
Query: 76 DGRMLDGRELRVQMA 90
+G+ LDGR +RV A
Sbjct: 67 NGKTLDGRAIRVDEA 81
>gi|162450147|ref|YP_001612514.1| RNA-binding protein [Sorangium cellulosum So ce56]
gi|161160729|emb|CAN92034.1| RNA-binding protein [Sorangium cellulosum So ce56]
Length = 95
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 45/76 (59%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L V NL++ TT + L F GEV +I +P DR T + RGFAFV + A A+ +
Sbjct: 5 LYVGNLSFNTTRETLESAFAAAGEVREIAMPTDRETGQPRGFAFVTMGTAQAANSAISQL 64
Query: 76 DGRMLDGRELRVQMAR 91
+G MLDGR L+V A+
Sbjct: 65 NGAMLDGRTLKVNEAQ 80
>gi|26452521|dbj|BAC43345.1| putative Serine/arginine rich protein [Arabidopsis thaliana]
Length = 236
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 49/83 (59%)
Query: 12 GMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDA 71
G L + NL P+DLR FER G + DIY+PR+ +T E RGF FV++ DA +A
Sbjct: 45 GPSGLLIRNLPLDARPNDLRDSFERFGPLKDIYLPRNYYTGEPRGFGFVKYRYAEDAAEA 104
Query: 72 LDAMDGRMLDGRELRVQMARYGR 94
+ M+ +++ GRE+ + A R
Sbjct: 105 MKRMNHKVIGGREIAIVFAEENR 127
>gi|224031575|gb|ACN34863.1| unknown [Zea mays]
Length = 240
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 76/163 (46%), Gaps = 27/163 (16%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L + N++ P+D+R FE+ G + D+Y+PR+ TRE RGF FV+F DA A M
Sbjct: 59 LLIRNISLTARPEDIRATFEQFGPIKDVYLPRNFHTRELRGFGFVKFRYPEDAAVAKREM 118
Query: 76 DGRMLDGRELRVQMARYGRPPSSSRSRGGRDRDRRRDRSRSRDRRYTRS----------- 124
+++ GRE+ + A +R R R R R D RYTR
Sbjct: 119 HHQVIGGREISIVYA------EENRKTPQEMRMRTRTSGRYMDERYTRLSRSPGSRSHSY 172
Query: 125 --------RSFSSRSRSGSKSPRKARSKSIDRDNKHER-NGRS 158
R F R R S SP+ + S RD++H R +GRS
Sbjct: 173 SPPPSPVRRDFRGRERPDSYSPQYSHSPR-PRDSRHHRSDGRS 214
>gi|414867727|tpg|DAA46284.1| TPA: hypothetical protein ZEAMMB73_663605 [Zea mays]
Length = 494
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 46/79 (58%), Gaps = 9/79 (11%)
Query: 23 YRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA----MDG- 77
Y T PDDLRR F + G V DIY+P+D +TRE RGF F+++FD DA D L + + G
Sbjct: 354 YYTRPDDLRRPFGKFGPVKDIYLPKDYYTREPRGFGFIQYFDPEDASDELGSGMLEIQGA 413
Query: 78 ----RMLDGRELRVQMARY 92
R+L G+ L +
Sbjct: 414 RGTTRILSGQSLTCTAVSW 432
>gi|344292751|ref|XP_003418089.1| PREDICTED: putative RNA-binding protein 3-like [Loxodonta africana]
Length = 154
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 63/132 (47%), Gaps = 13/132 (9%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L V L + T L F G + ++ + +DR T+ SRGF F+ F + A DA+ AM
Sbjct: 8 LFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRAM 67
Query: 76 DGRMLDGRELRVQMA-------------RYGRPPSSSRSRGGRDRDRRRDRSRSRDRRYT 122
+G LDGR++RV A +GR S SR G + R SR Y
Sbjct: 68 NGESLDGRQIRVDHAGKSARGTRGGAFGAHGRGRSYSRGGGDQGYGSSRYDSRPGGYGYG 127
Query: 123 RSRSFSSRSRSG 134
RSR +S RS+ G
Sbjct: 128 RSRDYSGRSQGG 139
>gi|158335765|ref|YP_001516937.1| RNA-binding protein [Acaryochloris marina MBIC11017]
gi|359461305|ref|ZP_09249868.1| RNA-binding protein [Acaryochloris sp. CCMEE 5410]
gi|158306006|gb|ABW27623.1| RNA-binding protein [Acaryochloris marina MBIC11017]
Length = 95
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 51/94 (54%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
+++ + NL+Y T DDL VF GEV + +P DR + RGF FV D+ + E A++
Sbjct: 1 MTVYIGNLSYEVTEDDLSAVFAEYGEVKQVKLPVDRESGRKRGFGFVEMQDESNEEKAIE 60
Query: 74 AMDGRMLDGRELRVQMARYGRPPSSSRSRGGRDR 107
+DG GR L+V A+ P +S GG R
Sbjct: 61 ELDGAEWMGRTLKVNKAKPRTPRPTSSGWGGNQR 94
>gi|168016155|ref|XP_001760615.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688312|gb|EDQ74690.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 176
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 57/96 (59%), Gaps = 1/96 (1%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
++ V NL + T +DL +F G++G + I +D+ TRES+G AF+ + + DA A+
Sbjct: 20 TVYVSNLDFSLTNNDLHTIFSTFGKIGKVTIVKDKQTRESKGVAFILYASRDDAHAAVKT 79
Query: 75 MDGRMLDGRELRVQMAR-YGRPPSSSRSRGGRDRDR 109
M+G++L+ R L+V +A GR R R +D+ R
Sbjct: 80 MNGKILNKRTLKVSIAEDNGRAKEFIRRREYKDKSR 115
>gi|344250008|gb|EGW06112.1| Putative RNA-binding protein 3 [Cricetulus griseus]
Length = 169
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 60/117 (51%), Gaps = 4/117 (3%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L V L + T L F G + ++ + +DR T+ SRGF F+ F + A DA+ AM
Sbjct: 8 LFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRAM 67
Query: 76 DGRMLDGRELRVQMARYGRPPSSSRSRGGRDRDRRRDRSRSRDRRYTRSRSFSSRSR 132
+G LDGR++RV A S+ SRGG R RS SR ++ SF+ R R
Sbjct: 68 NGESLDGRQIRVDHA----GKSARGSRGGAFGAHGRGRSYSRGLCFSLRLSFAGRKR 120
>gi|241779177|ref|XP_002399858.1| splicing factor SC35, putative [Ixodes scapularis]
gi|215508537|gb|EEC17991.1| splicing factor SC35, putative [Ixodes scapularis]
Length = 209
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 55/93 (59%), Gaps = 9/93 (9%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR- 61
Y RPP SL + N+ T P+DLR +F + G + D+YIP D + R RGFA+V+
Sbjct: 5 YSRPP-----NSSLFIRNVPDGTRPEDLRSLFGKYGPITDVYIPVDYYARRPRGFAYVQY 59
Query: 62 --FFDK-RDAEDALDAMDGRMLDGRELRVQMAR 91
F D RDAEDA+ ++D GREL ++ A+
Sbjct: 60 PLFLDHLRDAEDAMYSLDRTRFYGRELEIEFAQ 92
>gi|224120444|ref|XP_002318331.1| predicted protein [Populus trichocarpa]
gi|222859004|gb|EEE96551.1| predicted protein [Populus trichocarpa]
Length = 181
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 50/76 (65%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L V L++RTT + LR F+ G++ D+ + D+ + RGFAF+R+ + +A+ A++ M
Sbjct: 92 LYVSGLSFRTTEESLRNAFQNFGQLVDVNLVMDKVAKRPRGFAFLRYETEEEAQKAIEGM 151
Query: 76 DGRMLDGRELRVQMAR 91
G+ LDGR + V++A+
Sbjct: 152 HGKFLDGRVIFVEVAK 167
>gi|225464267|ref|XP_002271224.1| PREDICTED: cold-inducible RNA-binding protein [Vitis vinifera]
gi|296088019|emb|CBI35302.3| unnamed protein product [Vitis vinifera]
Length = 170
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 49/76 (64%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L V L++RTT + LR FE G++ ++ + D+ RGFAF+R+ + ++E A++ M
Sbjct: 81 LYVSGLSFRTTEESLRNAFETFGQLVEVNLVMDKIANRPRGFAFLRYSTEEESEKAIEGM 140
Query: 76 DGRMLDGRELRVQMAR 91
G+ LDGR + V++A+
Sbjct: 141 HGKFLDGRVIFVEVAK 156
>gi|119488026|ref|ZP_01621470.1| RNA-binding region protein [Lyngbya sp. PCC 8106]
gi|119455315|gb|EAW36454.1| RNA-binding region protein [Lyngbya sp. PCC 8106]
Length = 100
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 55/98 (56%), Gaps = 3/98 (3%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
+S+ V NL Y T +DL+ VF G V + IP DR T RGFAFV + + + A++
Sbjct: 1 MSIYVGNLAYEVTEEDLKSVFAEYGAVQRVSIPTDRETGRPRGFAFVEMGAESEEDAAIE 60
Query: 74 AMDGRMLDGRELRVQMARYGRPPSSSRSRGGRDRDRRR 111
A+DG GR+L+V A +P + S GG +R R R
Sbjct: 61 ALDGAEWMGRDLKVNKA---KPRENKGSFGGGNRQRGR 95
>gi|115453135|ref|NP_001050168.1| Os03g0363800 [Oryza sativa Japonica Group]
gi|108708312|gb|ABF96107.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113548639|dbj|BAF12082.1| Os03g0363800 [Oryza sativa Japonica Group]
gi|215737124|dbj|BAG96053.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 243
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 51/88 (57%), Gaps = 3/88 (3%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKR 66
PP G++ V N++ P+D+R FE+ G V D+Y+PR+ TRE RGF FV+F
Sbjct: 57 PPAPTGLL---VRNISLTARPEDIRIPFEQFGPVKDVYLPRNFHTRELRGFGFVKFRYPE 113
Query: 67 DAEDALDAMDGRMLDGRELRVQMARYGR 94
DA A ++ +++ GRE+ + A R
Sbjct: 114 DAAVAKQELNHQVIGGREISIVFAEENR 141
>gi|158340529|ref|YP_001521523.1| RNA-binding protein [Acaryochloris marina MBIC11017]
gi|158310770|gb|ABW32384.1| RNA-binding protein [Acaryochloris marina MBIC11017]
Length = 91
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 48/78 (61%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
+S+ V NL+Y +DLR +F GEV ++++P+DR T + RGFAFV + D A++
Sbjct: 1 MSIYVGNLSYEVAQEDLRAIFSEYGEVTNVHLPKDRETGKLRGFAFVDLGNDADEVKAIE 60
Query: 74 AMDGRMLDGRELRVQMAR 91
+DG GR L+V AR
Sbjct: 61 DLDGAEWMGRSLKVNKAR 78
>gi|125586354|gb|EAZ27018.1| hypothetical protein OsJ_10948 [Oryza sativa Japonica Group]
Length = 254
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 51/88 (57%), Gaps = 3/88 (3%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKR 66
PP G++ V N++ P+D+R FE+ G V D+Y+PR+ TRE RGF FV+F
Sbjct: 57 PPAPTGLL---VRNISLTARPEDIRIPFEQFGPVKDVYLPRNFHTRELRGFGFVKFRYPE 113
Query: 67 DAEDALDAMDGRMLDGRELRVQMARYGR 94
DA A ++ +++ GRE+ + A R
Sbjct: 114 DAAVAKQELNHQVIGGREISIVFAEENR 141
>gi|398405202|ref|XP_003854067.1| hypothetical protein MYCGRDRAFT_92083 [Zymoseptoria tritici IPO323]
gi|339473950|gb|EGP89043.1| hypothetical protein MYCGRDRAFT_92083 [Zymoseptoria tritici IPO323]
Length = 416
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 12 GMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDA 71
G ++VDN+ Y T +DLR +FER G V + + DR R S+G AFV + D RDA DA
Sbjct: 168 GGSKIRVDNIHYELTENDLRELFERIGPVASVRLLYDRADR-SQGTAFVIYEDPRDASDA 226
Query: 72 LDAMDGRMLDGRELRVQMARYGRPPSSSR 100
+ DG+ +G+ +R+ + G PS+ R
Sbjct: 227 VQQFDGQNANGQAIRMTLLPAGPAPSAPR 255
>gi|124801947|ref|XP_001347313.1| RNA binding protein, putative [Plasmodium falciparum 3D7]
gi|23494891|gb|AAN35226.1| RNA binding protein, putative [Plasmodium falciparum 3D7]
Length = 248
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 49/81 (60%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
+L V NL+ + T L+ +FE+ G + Y+ + T+ESR F FV F + DAE+A++
Sbjct: 21 TLYVSNLSSKITTAKLQDIFEKYGNIEKCYVISNPITKESRNFGFVTFNNSEDAENAMNK 80
Query: 75 MDGRMLDGRELRVQMARYGRP 95
+ ++GRE+ V++A+ P
Sbjct: 81 ANKMEIEGREINVEIAKRNEP 101
>gi|125543974|gb|EAY90113.1| hypothetical protein OsI_11679 [Oryza sativa Indica Group]
Length = 254
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 51/88 (57%), Gaps = 3/88 (3%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKR 66
PP G++ V N++ P+D+R FE+ G V D+Y+PR+ TRE RGF FV+F
Sbjct: 57 PPAPTGLL---VRNISLTARPEDIRIPFEQFGPVKDVYLPRNFHTRELRGFGFVKFRYPE 113
Query: 67 DAEDALDAMDGRMLDGRELRVQMARYGR 94
DA A ++ +++ GRE+ + A R
Sbjct: 114 DAAVAKQELNHQVIGGREISIVFAEENR 141
>gi|391342380|ref|XP_003745498.1| PREDICTED: nuclear cap-binding protein subunit 2-like [Metaseiulus
occidentalis]
Length = 152
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 61/105 (58%), Gaps = 12/105 (11%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
+L V NL++ TT + + +F+RCG+V + + DRF + GF FV ++D+ DAE+A+
Sbjct: 32 TLYVGNLSFYTTEEQIFELFDRCGDVKRVIMGLDRFQKTPCGFCFVEYYDRADAENAMCW 91
Query: 75 MDGRMLDGRELR-------VQMARYGRPPSSSRSRGGRDRDRRRD 112
++G LD R +R ++ +YGR S GG+ RD R+
Sbjct: 92 VNGTKLDDRIIRTDWDAGFIEGRQYGRGKS-----GGQVRDEYRN 131
>gi|229367642|gb|ACQ58801.1| Cold-inducible RNA-binding protein [Anoplopoma fimbria]
Length = 179
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 47/75 (62%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L + L++ T + L F + G + + + RDR T +SRGF FV++ + DA+DA+D M
Sbjct: 7 LFIGGLSFETNEESLAAAFGKYGTIEKVDVIRDRETEKSRGFGFVKYDNAEDAKDAMDGM 66
Query: 76 DGRMLDGRELRVQMA 90
+G+ LDGR +RV A
Sbjct: 67 NGQTLDGRTIRVDEA 81
>gi|220909892|ref|YP_002485203.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7425]
gi|219866503|gb|ACL46842.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7425]
Length = 98
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 54/100 (54%), Gaps = 3/100 (3%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
+S+ V NL+Y T +DL R F G V +++P DR T RGFAFV + + A++
Sbjct: 1 MSIYVGNLSYDVTQNDLVRAFGEYGNVKSVHLPTDRETGRVRGFAFVEMENTPEETAAIE 60
Query: 74 AMDGRMLDGRELRVQMARYGRPPSSSRSRGGRDRDRRRDR 113
A+DG GR+L+V A +P RS GG + R R
Sbjct: 61 ALDGAEWMGRDLKVNKA---KPREDKRSSGGWSGNNRSSR 97
>gi|209155104|gb|ACI33784.1| Cold-inducible RNA-binding protein [Salmo salar]
gi|223648252|gb|ACN10884.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 167
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 49/75 (65%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L V L++ T L VF + G++ ++ + +DR T+ SRGF FV F + +A+DA+ AM
Sbjct: 7 LFVGGLSFDTNEQSLEDVFSKYGQISEVVVIKDRETQRSRGFGFVTFENPDEAKDAMLAM 66
Query: 76 DGRMLDGRELRVQMA 90
+G+ LDGR++RV A
Sbjct: 67 NGKSLDGRQIRVDQA 81
>gi|427723348|ref|YP_007070625.1| RNP-1 like RNA-binding protein [Leptolyngbya sp. PCC 7376]
gi|427355068|gb|AFY37791.1| RNP-1 like RNA-binding protein [Leptolyngbya sp. PCC 7376]
Length = 83
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 46/78 (58%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
+S+ V NL Y DDL+ VF G V +Y+P DR T RGF FV ++ + E A++
Sbjct: 1 MSIYVGNLDYAVEEDDLKEVFADYGTVKRVYLPMDRETNRKRGFGFVEMANEGEEEKAIE 60
Query: 74 AMDGRMLDGRELRVQMAR 91
A+DG GRE+RV AR
Sbjct: 61 ALDGASWMGREMRVNKAR 78
>gi|330847369|gb|AEC46650.1| cold inducible RNA binding protein transcript variant 2 [Sus
scrofa]
Length = 182
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 49/75 (65%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L V L++ T L +VF + G++ ++ + +DR T+ SR F FV F + DA+DA+ AM
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRDFGFVTFENIDDAKDAMMAM 67
Query: 76 DGRMLDGRELRVQMA 90
+G+ +DGR++RV A
Sbjct: 68 NGKSVDGRQIRVDQA 82
>gi|8918490|dbj|BAA97656.1| RNA-binding protein [Candida boidinii]
Length = 255
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
S+ + NL Y TPD+L++ FE CG + I IP ++FT +GFA++ F D AL +
Sbjct: 125 SVYIGNLDYAATPDELQKHFESCGSINRITIPTNKFTGNPKGFAYIEFSDASYVPQAL-S 183
Query: 75 MDGRMLDGRELRVQMARYGRP 95
++ + GR L++ R P
Sbjct: 184 LNDSLFKGRNLKISAKRTNVP 204
>gi|431930897|ref|YP_007243943.1| RRM domain-containing RNA-binding protein [Thioflavicoccus mobilis
8321]
gi|431829200|gb|AGA90313.1| RRM domain-containing RNA-binding protein [Thioflavicoccus mobilis
8321]
Length = 90
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
+++ V NL Y DLR F R GEV + + DR T ES+GF FV A+ A+
Sbjct: 1 MNIYVGNLPYNVKDADLRETFSRFGEVSQVTVIMDRLTGESKGFGFVEMSSNSQADAAIK 60
Query: 74 AMDGRMLDGRELRVQMARYGRPPSSSRSRGGR 105
++G L+GR + V A +P S S SRG R
Sbjct: 61 GLNGTDLNGRNITVNQA---KPKSDSSSRGKR 89
>gi|357478561|ref|XP_003609566.1| Splicing factor, arginine/serine-rich 13A [Medicago truncatula]
gi|355510621|gb|AES91763.1| Splicing factor, arginine/serine-rich 13A [Medicago truncatula]
Length = 192
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 47/79 (59%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L V NL P+DLR FER G V D+Y+PR+ +T E RGF FV++ DA +A +
Sbjct: 50 LLVRNLPLDARPEDLRGPFERYGPVKDVYLPRNYYTGEPRGFGFVKYRHGEDAAEAKQQL 109
Query: 76 DGRMLDGRELRVQMARYGR 94
+ ++ GRE+R+ A R
Sbjct: 110 NHTIIGGREIRIVFAEENR 128
>gi|387913830|gb|AFK10524.1| cold inducible RNA binding protein isoform 3 [Callorhinchus
milii]
gi|392873312|gb|AFM85488.1| cold inducible RNA binding protein isoform 3 [Callorhinchus
milii]
gi|392873324|gb|AFM85494.1| cold inducible RNA binding protein isoform 3 [Callorhinchus
milii]
gi|392873420|gb|AFM85542.1| cold inducible RNA binding protein isoform 3 [Callorhinchus
milii]
gi|392873526|gb|AFM85595.1| cold inducible RNA binding protein isoform 3 [Callorhinchus
milii]
gi|392873598|gb|AFM85631.1| cold inducible RNA binding protein isoform 3 [Callorhinchus
milii]
gi|392877296|gb|AFM87480.1| cold inducible RNA binding protein isoform 3 [Callorhinchus
milii]
Length = 136
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 44/72 (61%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L V L + T L VF G+V ++ I RDR T SRGF FV F DA+DAL +M
Sbjct: 7 LFVGGLNFNTEEQSLEEVFSEYGQVSEVRIIRDRDTGTSRGFGFVTFESPDDAQDALTSM 66
Query: 76 DGRMLDGRELRV 87
+GR L+GR++RV
Sbjct: 67 NGRSLEGRQIRV 78
>gi|148231554|ref|NP_001080069.1| cold-inducible RNA-binding protein A [Xenopus laevis]
gi|284018072|sp|O93235.2|CIRBA_XENLA RecName: Full=Cold-inducible RNA-binding protein A; AltName:
Full=Cold-inducible RNA-binding protein; Short=XCIRP;
AltName: Full=Cold-inducible RNA-binding protein 1;
Short=XCIRP-1; AltName: Full=Glycine-rich RNA-binding
protein CIRP-A
gi|27735413|gb|AAH41204.1| Cirbp-prov protein [Xenopus laevis]
Length = 166
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 48/75 (64%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L + L + T D L + F + G + ++ + +DR T+ SRGF FV F + DA+DA+ AM
Sbjct: 7 LFIGGLNFETNEDCLEQAFTKYGRISEVVVVKDRETKRSRGFGFVTFENVDDAKDAMMAM 66
Query: 76 DGRMLDGRELRVQMA 90
+G+ +DGR++RV A
Sbjct: 67 NGKSVDGRQIRVDQA 81
>gi|220906552|ref|YP_002481863.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7425]
gi|219863163|gb|ACL43502.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7425]
Length = 101
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 58/99 (58%), Gaps = 4/99 (4%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
+S+ + NL+Y T DDL +VF G V +++P DR T RGFAFV + + E A+D
Sbjct: 1 MSIYIGNLSYTVTQDDLIQVFGEYGTVKSVHLPTDRETGRMRGFAFVEMENNNEEEAAID 60
Query: 74 AMDGRMLDGRELRVQMARYGRP-PSSSRSRGGRDRDRRR 111
A+DG GR+L+V A +P S SRGG +++R
Sbjct: 61 ALDGAEWMGRDLKVNKA---KPREDRSASRGGWSSNQKR 96
>gi|67593714|ref|XP_665745.1| hypothetical protein [Cryptosporidium hominis TU502]
gi|54656562|gb|EAL35515.1| hypothetical protein Chro.50251 [Cryptosporidium hominis]
Length = 254
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 79/155 (50%), Gaps = 15/155 (9%)
Query: 8 PRIE----GMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFF 63
P+IE +L V L+ +T DDLRR+FE GEV D ++ + + ESR F FV
Sbjct: 61 PQIERSNDPSCTLYVCRLSLKTKEDDLRRLFEDYGEVTDCHLVTNPLSGESRCFGFVTMG 120
Query: 64 DKRDAEDALDAMDGRMLDGRELRVQMARYGRP--PSSSRSRGGRDRDRRRDRSRSRDRRY 121
++ +A A DA+DG+ L+V+ AR +P P+ +G + R + + SR Y
Sbjct: 121 NEEEAARAKDALDGKEYQDASLKVETARRAKPYDPTPGEYKGPQYRSIKYN---SRTGYY 177
Query: 122 TRS----RSF--SSRSRSGSKSPRKARSKSIDRDN 150
+RS SF S+RSR P +R +R N
Sbjct: 178 SRSSHRGNSFRHSTRSRYDYPPPSHSRGDQYNRHN 212
>gi|356508744|ref|XP_003523114.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Glycine
max]
Length = 305
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
Query: 5 RPPPR--IEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRF 62
RPPPR E +S+ V NL + L ++F G V + + DR TR SRGF FV
Sbjct: 209 RPPPRHSFEPSLSIYVGNLPWDVDNTRLEQIFSEHGNVVNARVVYDRETRRSRGFGFVTM 268
Query: 63 FDKRDAEDALDAMDGRMLDGRELRVQMAR 91
D+ + +DA+ A+DG+ LDGR +RV +A
Sbjct: 269 SDETEMKDAVAALDGQSLDGRPIRVSVAE 297
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 45/100 (45%), Gaps = 9/100 (9%)
Query: 2 SYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
S+ PP + L V NL Y L +FE+ G V + +R T +SRGF FV
Sbjct: 116 SFAEPPEEAK----LFVGNLPYDVDSQKLAMLFEQAGTVEIAEVIYNRETDQSRGFGFVT 171
Query: 62 FFDKRDAEDALDAMDGRMLDGRELRVQMA-----RYGRPP 96
+AE+A++ DGR L V A R RPP
Sbjct: 172 MSTVEEAENAVEKFSRYDFDGRLLTVNKASPRGTRPERPP 211
>gi|83643344|ref|YP_431779.1| RNA-binding protein [Hahella chejuensis KCTC 2396]
gi|83631387|gb|ABC27354.1| RNA-binding protein (RRM domain) [Hahella chejuensis KCTC 2396]
Length = 92
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 48/78 (61%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
+++ V NL+Y+ T DDLR F G++ ++ I RDR T +S+GF FV D AE+A+
Sbjct: 1 MNIYVGNLSYQVTEDDLREAFAAYGDISNVNIIRDRDTGQSKGFGFVEMSDNGQAEEAIQ 60
Query: 74 AMDGRMLDGRELRVQMAR 91
++ L GR ++V AR
Sbjct: 61 KLNESNLKGRNMKVNEAR 78
>gi|241100004|ref|XP_002409732.1| conserved hypothetical protein [Ixodes scapularis]
gi|215492805|gb|EEC02446.1| conserved hypothetical protein [Ixodes scapularis]
Length = 211
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 51/90 (56%), Gaps = 6/90 (6%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRF 62
Y RPP SL V NL T P+DLR F + G + D+YIP D TR RGF +V++
Sbjct: 5 YSRPP-----NSSLFVRNLPDGTRPEDLRSFFSKHGPLTDVYIPMDYHTRRPRGFGYVQY 59
Query: 63 -FDKRDAEDALDAMDGRMLDGRELRVQMAR 91
RDAEDA A+D GRE+ ++ AR
Sbjct: 60 PLYLRDAEDAKYALDKARFCGREIEIEFAR 89
>gi|410445335|gb|ADB77883.2| Rbmy [Bos taurus]
Length = 387
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 46/75 (61%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L + L+ TT + L F + G + ++ + +DR T +SRGFAF+ F DA+DA M
Sbjct: 9 LLIGGLSAETTEESLEAEFGKYGHIVEVLLIKDRNTNKSRGFAFITFESPADAKDAAKEM 68
Query: 76 DGRMLDGRELRVQMA 90
+G+ LDG+ ++V+ A
Sbjct: 69 NGKFLDGKTIKVEQA 83
>gi|343958808|dbj|BAK63259.1| cold-inducible RNA-binding protein [Pan troglodytes]
Length = 225
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 55/88 (62%), Gaps = 3/88 (3%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L V L++ T L +VF + G++ ++ + +DR T+ SRG FV F + DA+DA+ AM
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGSGFVTFENIDDAKDAMMAM 67
Query: 76 DGRMLDGRELRVQMARYGRPPSSSRSRG 103
+G+ +DGR++RV A S +RSRG
Sbjct: 68 NGKSVDGRQIRVDQA---GKSSDNRSRG 92
>gi|254414476|ref|ZP_05028242.1| RNA-binding protein, putative [Coleofasciculus chthonoplastes PCC
7420]
gi|196178706|gb|EDX73704.1| RNA-binding protein, putative [Coleofasciculus chthonoplastes PCC
7420]
Length = 96
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 46/78 (58%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
+++ + NL+Y+ T DDL+ VF G V + +P DR T RGFAFV D+ E A+
Sbjct: 1 MTIYIGNLSYQATEDDLQTVFADYGTVKRVVLPTDRETGRVRGFAFVEMTDEAQEESAIS 60
Query: 74 AMDGRMLDGRELRVQMAR 91
+DG GR+LRV AR
Sbjct: 61 QLDGAEWMGRQLRVNKAR 78
>gi|1843458|gb|AAB81555.1| Rbm [Mus musculus]
Length = 380
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 57/97 (58%), Gaps = 9/97 (9%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
+ + L +T L+ +F R G V + + RDR T++SRGFAF+ F DA++A+ M
Sbjct: 10 IFIGGLNIKTRQKTLQEIFGRFGPVARVILMRDRETKKSRGFAFLTFRRPADAKNAVKEM 69
Query: 76 DGRMLDGRELRVQMAR---------YGRPPSSSRSRG 103
+G +LDG+ ++V+ AR RPPS SR+RG
Sbjct: 70 NGVILDGKRIKVKQARRPSSLESGSKKRPPSFSRTRG 106
>gi|330847367|gb|AEC46649.1| cold inducible RNA binding protein transcript variant 1 [Sus
scrofa]
Length = 172
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 49/75 (65%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L V L++ T L +VF + G++ ++ + +DR T+ SR F FV F + DA+DA+ AM
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRDFGFVTFENIDDAKDAMMAM 67
Query: 76 DGRMLDGRELRVQMA 90
+G+ +DGR++RV A
Sbjct: 68 NGKSVDGRQIRVDQA 82
>gi|258546236|ref|ZP_05706470.1| RNA-binding protein [Cardiobacterium hominis ATCC 15826]
gi|258518502|gb|EEV87361.1| RNA-binding protein [Cardiobacterium hominis ATCC 15826]
Length = 102
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 49/78 (62%)
Query: 13 MVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDAL 72
M+++ V NL+Y+ T +LR +F GEVG++ I +DR + S+GF FV D A+
Sbjct: 1 MINIYVGNLSYQATEQELREMFASHGEVGNVTIIKDRDSGRSKGFGFVEMNDNSAGLRAI 60
Query: 73 DAMDGRMLDGRELRVQMA 90
DA++G+ L GR L++ A
Sbjct: 61 DALNGKDLGGRPLKINEA 78
>gi|7439974|pir||JC6571 cold-inducible RNA-binding protein homolog - clawed frog
gi|3341887|dbj|BAA31861.1| cold-inducible RNA binding protein [Xenopus laevis]
Length = 163
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 48/75 (64%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L + L + T D L + F + G + ++ + +DR T+ SRGF FV F + DA+DA+ AM
Sbjct: 7 LFIGGLNFETNEDCLEQAFTKYGRISEVVVVKDRETKRSRGFGFVTFENVDDAKDAMMAM 66
Query: 76 DGRMLDGRELRVQMA 90
+G+ +DGR++RV A
Sbjct: 67 NGKSVDGRQIRVDQA 81
>gi|224002947|ref|XP_002291145.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220972921|gb|EED91252.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 324
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 62/116 (53%), Gaps = 2/116 (1%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
VSL V N+ + DL+ F R GEV D+YIPRD +++ +GFAF+ + A +A D
Sbjct: 189 VSLLVRNVNGEISTQDLQMAFGRIGEVRDVYIPRDFHSQQPKGFAFIEYATPEQAREARD 248
Query: 74 AMDGRMLDGRELRVQMARYGR-PPSSSRSRGGRDRDRR-RDRSRSRDRRYTRSRSF 127
M+ M+ GRE+ V A+ R P+ R R R+ R +R + RS SF
Sbjct: 249 EMNHFMMKGREIEVVYAQEKRKTPNEMRGRVVDGREVRPGERGGGGGGDFQRSSSF 304
>gi|395394008|ref|NP_001257441.1| RNA-binding motif protein, Y chromosome, family 1 member B [Mus
musculus]
gi|341942161|sp|Q60990.3|RBY1B_MOUSE RecName: Full=RNA-binding motif protein, Y chromosome, family 1
member B; AltName: Full=RNA-binding motif protein 1
Length = 380
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 57/97 (58%), Gaps = 9/97 (9%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
+ + L +T L+ +F R G V + + RDR T++SRGFAF+ F DA++A+ M
Sbjct: 10 IFIGGLNIKTRQKTLQEIFGRFGPVARVILMRDRETKKSRGFAFLTFRRPADAKNAVKEM 69
Query: 76 DGRMLDGRELRVQMAR---------YGRPPSSSRSRG 103
+G +LDG+ ++V+ AR RPPS SR+RG
Sbjct: 70 NGVILDGKRIKVKQARRPSSLESGSKKRPPSFSRTRG 106
>gi|388505224|gb|AFK40678.1| unknown [Lotus japonicus]
Length = 187
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 49/76 (64%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L V L++RTT + LR F+ G++ D+ + D+ RGFAF+R+ + +++ A++ M
Sbjct: 96 LYVSGLSFRTTEESLRNCFKNFGQLVDVNLVMDKLANRPRGFAFLRYATEEESQKAIEGM 155
Query: 76 DGRMLDGRELRVQMAR 91
G+ LDGR + V++A+
Sbjct: 156 HGKFLDGRVIFVEVAK 171
>gi|15239676|ref|NP_200269.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|9758950|dbj|BAB09337.1| unnamed protein product [Arabidopsis thaliana]
gi|18175762|gb|AAL59923.1| unknown protein [Arabidopsis thaliana]
gi|20465513|gb|AAM20239.1| unknown protein [Arabidopsis thaliana]
gi|21553374|gb|AAM62467.1| unknown [Arabidopsis thaliana]
gi|332009129|gb|AED96512.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 156
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 50/94 (53%), Gaps = 3/94 (3%)
Query: 8 PRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRD 67
P+ E +L V L+ RTT + LR F + GEV D + DR + S+GF FVR+ D
Sbjct: 50 PQAEPSTNLFVSGLSKRTTSEGLRTAFAQFGEVADAKVVTDRVSGYSKGFGFVRYATLED 109
Query: 68 AEDALDAMDGRMLDGRELRVQMARYGRPPSSSRS 101
+ + MDG+ LDG V A Y RP S+S
Sbjct: 110 SAKGIAGMDGKFLDG---WVIFAEYARPREQSQS 140
>gi|82248148|sp|Q9PTX2.1|CIRBP_RANCA RecName: Full=Cold-inducible RNA-binding protein; Short=BFCIRP;
AltName: Full=Glycine-rich RNA-binding protein CIRP
gi|6682989|dbj|BAA88978.1| BFCIRP [Rana catesbeiana]
Length = 164
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 48/75 (64%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L V L++ T L VF + G++ ++ + +DR T+ SRGF FV F + DA+DA+ M
Sbjct: 8 LFVGGLSFDTDEQCLETVFSKYGQIQEVVVVKDRETKRSRGFGFVTFENCEDAKDAMAGM 67
Query: 76 DGRMLDGRELRVQMA 90
+G+ +DGR++RV A
Sbjct: 68 NGKTVDGRQIRVDQA 82
>gi|432915990|ref|XP_004079241.1| PREDICTED: cold-inducible RNA-binding protein-like [Oryzias
latipes]
Length = 174
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 46/72 (63%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L + L++ T D L F + G + + + RD+ T SRGF FV++ + DA+DALDAM
Sbjct: 7 LFIGGLSFETNEDSLAAAFGKYGTIEKVDVIRDKETGRSRGFGFVKYDNVEDAKDALDAM 66
Query: 76 DGRMLDGRELRV 87
+G+ LDGR +RV
Sbjct: 67 NGKTLDGRAIRV 78
>gi|164659141|ref|XP_001730695.1| hypothetical protein MGL_2149 [Malassezia globosa CBS 7966]
gi|159104592|gb|EDP43481.1| hypothetical protein MGL_2149 [Malassezia globosa CBS 7966]
Length = 190
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 52/84 (61%), Gaps = 1/84 (1%)
Query: 13 MVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDAL 72
M + V NL++ TT D L + F G++ D + +DR + SRGF FV F +++A+ A+
Sbjct: 1 MAKVYVGNLSWSTTDDGLAQAFSPYGQLTDYIVMKDRDSGRSRGFGFVTFMTQQEADAAI 60
Query: 73 DAMDGRMLDGRELRVQMARYGRPP 96
A++ + LDGR +RV MA RPP
Sbjct: 61 MALNEQELDGRRIRVNMAN-SRPP 83
>gi|294933968|ref|XP_002780925.1| FUS-interacting serine-arginine-rich protein, putative [Perkinsus
marinus ATCC 50983]
gi|239891072|gb|EER12720.1| FUS-interacting serine-arginine-rich protein, putative [Perkinsus
marinus ATCC 50983]
Length = 137
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 43/62 (69%)
Query: 30 LRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAMDGRMLDGRELRVQM 89
LR FE+ GE+ D+YIP D ++R RGF FV F D RDA++A AMDG+ + G + V++
Sbjct: 3 LREAFEKYGEIRDVYIPLDYYSRRPRGFGFVEFSDPRDADEAKAAMDGKRIGGNAIEVEI 62
Query: 90 AR 91
A+
Sbjct: 63 AK 64
>gi|428166035|gb|EKX35018.1| translation initiation factor 3, subunit G [Guillardia theta
CCMP2712]
Length = 351
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 52/84 (61%)
Query: 8 PRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRD 67
P+ E +L+V N++ T +D+ +F++ G + + +P DR T E RGFAF+ F+++ D
Sbjct: 190 PQEEEKATLRVTNVSTDATREDMHELFKQFGPIARVSVPTDRATGEGRGFAFIDFYNRED 249
Query: 68 AEDALDAMDGRMLDGRELRVQMAR 91
A+ A++A++G D L V AR
Sbjct: 250 AQRAINALNGTGFDSLILNVDWAR 273
>gi|449437540|ref|XP_004136550.1| PREDICTED: serine/arginine-rich splicing factor 33-like [Cucumis
sativus]
gi|449516345|ref|XP_004165207.1| PREDICTED: serine/arginine-rich splicing factor 33-like [Cucumis
sativus]
Length = 210
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 49/77 (63%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
SL V NL + P+DLR +F R G + DIY+PRD ++ E RGF FV+F D DA DA
Sbjct: 37 TSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGEPRGFGFVQFVDAADAADAKY 96
Query: 74 AMDGRMLDGRELRVQMA 90
+DG++L G EL V A
Sbjct: 97 ELDGQVLLGHELTVVFA 113
>gi|384254118|gb|EIE27592.1| translation initiation factor 3, RNA-binding subunit [Coccomyxa
subellipsoidea C-169]
Length = 285
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 45/76 (59%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
S++V NL+ T DDLR +F G + IYI DR T ESRGFAFV F + DA A+
Sbjct: 203 SVRVTNLSEDTREDDLRELFSPFGPISRIYIAYDRETGESRGFAFVNFVHREDAARAVQK 262
Query: 75 MDGRMLDGRELRVQMA 90
+DG D LRV+ A
Sbjct: 263 LDGHGYDNLILRVEFA 278
>gi|395394021|ref|NP_001257447.1| predicted gene 4064 [Mus musculus]
Length = 380
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 57/97 (58%), Gaps = 9/97 (9%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
+ + L +T L+ +F R G V + + RDR T++SRGFAF+ F DA++A+ M
Sbjct: 10 IFIGGLNIKTRQKTLQEIFGRFGPVARVILMRDRETKKSRGFAFLTFRRLADAKNAVKEM 69
Query: 76 DGRMLDGRELRVQMAR---------YGRPPSSSRSRG 103
+G +LDG+ ++V+ AR RPPS SR+RG
Sbjct: 70 NGVILDGKRIKVKQARRPSSLESGSKKRPPSFSRTRG 106
>gi|395394012|ref|NP_001257443.1| predicted gene, 21693 [Mus musculus]
Length = 380
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 57/97 (58%), Gaps = 9/97 (9%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
+ + L +T L+ +F R G V + + RDR T++SRGFAF+ F DA++A+ M
Sbjct: 10 IFIGGLNIKTRQKTLQEIFGRFGPVARVILMRDRETKKSRGFAFLTFRRLADAKNAVKEM 69
Query: 76 DGRMLDGRELRVQMAR---------YGRPPSSSRSRG 103
+G +LDG+ ++V+ AR RPPS SR+RG
Sbjct: 70 NGVILDGKRIKVKQARRPSSLESGSKKRPPSFSRTRG 106
>gi|351710775|gb|EHB13694.1| Zinc finger CCHC-type and RNA-binding motif-containing protein 1
[Heterocephalus glaber]
Length = 207
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 52/90 (57%), Gaps = 4/90 (4%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MS G P + ++ V NL + T +DL R+F +C +V + I +D+ TR S+G AF+
Sbjct: 1 MSGGLAPSK----STVYVSNLPFSVTNNDLYRIFSKCSKVVKVTIVKDKDTRRSKGVAFI 56
Query: 61 RFFDKRDAEDALDAMDGRMLDGRELRVQMA 90
F DK A++ A++ + L GR ++ +A
Sbjct: 57 LFLDKNSAQNCTRAINNKQLFGRAIKASIA 86
>gi|303668381|gb|ADM16300.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 121
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 47/75 (62%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L V L++ TT + L F + G + + + RD+ T SRGF FV++ + DA+DALD M
Sbjct: 7 LFVGGLSFDTTEESLAEAFAKYGNIAKVDVIRDKETGRSRGFGFVKYDNAEDAKDALDGM 66
Query: 76 DGRMLDGRELRVQMA 90
+G+ +DGR +RV A
Sbjct: 67 NGKSVDGRTIRVDEA 81
>gi|115441831|ref|NP_001045195.1| Os01g0916600 [Oryza sativa Japonica Group]
gi|2624328|emb|CAA05729.1| OsGRP2 [Oryza sativa Japonica Group]
gi|19386753|dbj|BAB86134.1| OsGRP2 [Oryza sativa Japonica Group]
gi|20805007|dbj|BAB92683.1| OsGRP2 [Oryza sativa Japonica Group]
gi|113534726|dbj|BAF07109.1| Os01g0916600 [Oryza sativa Japonica Group]
gi|125528847|gb|EAY76961.1| hypothetical protein OsI_04919 [Oryza sativa Indica Group]
gi|125573102|gb|EAZ14617.1| hypothetical protein OsJ_04542 [Oryza sativa Japonica Group]
gi|215765299|dbj|BAG86996.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215768370|dbj|BAH00599.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 150
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L V L++ T D L+ F G+V + + DR + SRGF FV F + DA+ A+DAM
Sbjct: 39 LFVGGLSWNTNDDSLKEAFTSFGDVTEARVINDRESGRSRGFGFVSFANGDDAKSAMDAM 98
Query: 76 DGRMLDGRELRVQMARYGRPP 96
DG+ L+GR +RV A RPP
Sbjct: 99 DGKELEGRSIRVNFANE-RPP 118
>gi|2564280|emb|CAA75403.1| RNA-binding protein [Mus musculus]
Length = 380
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 57/97 (58%), Gaps = 9/97 (9%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
+ + L +T L+ +F R G V + + RDR T++SRGFAF+ F DA++A+ M
Sbjct: 10 IFIGGLNIKTRQKTLQEIFGRFGPVARVILMRDRETKKSRGFAFLTFRRLADAKNAVKEM 69
Query: 76 DGRMLDGRELRVQMAR---------YGRPPSSSRSRG 103
+G +LDG+ ++V+ AR RPPS SR+RG
Sbjct: 70 NGVILDGKRIKVKQARRPSSLESGSKKRPPSFSRTRG 106
>gi|261824019|ref|NP_035383.2| RNA-binding motif protein, Y chromosome, family 1 member A1 [Mus
musculus]
gi|261824021|ref|NP_001159856.1| RNA-binding motif protein, Y chromosome, family 1 member A1 [Mus
musculus]
gi|395394010|ref|NP_001257442.1| predicted gene, 21677 [Mus musculus]
gi|395394015|ref|NP_001257444.1| predicted gene, 21704 [Mus musculus]
gi|395394017|ref|NP_001257445.1| predicted gene, 21708 [Mus musculus]
gi|341941874|sp|O35698.2|RBY1A_MOUSE RecName: Full=RNA-binding motif protein, Y chromosome, family 1
member A1; AltName: Full=RNA-binding motif protein 1;
AltName: Full=Y chromosome RNA recognition motif 1
Length = 380
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 57/97 (58%), Gaps = 9/97 (9%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
+ + L +T L+ +F R G V + + RDR T++SRGFAF+ F DA++A+ M
Sbjct: 10 IFIGGLNIKTRQKTLQEIFGRFGPVARVILMRDRETKKSRGFAFLTFRRLADAKNAVKEM 69
Query: 76 DGRMLDGRELRVQMAR---------YGRPPSSSRSRG 103
+G +LDG+ ++V+ AR RPPS SR+RG
Sbjct: 70 NGVILDGKRIKVKQARRPSSLESGSKKRPPSFSRTRG 106
>gi|427738521|ref|YP_007058065.1| RRM domain-containing RNA-binding protein [Rivularia sp. PCC 7116]
gi|427373562|gb|AFY57518.1| RRM domain-containing RNA-binding protein [Rivularia sp. PCC 7116]
Length = 91
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 51/92 (55%), Gaps = 2/92 (2%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
+S+ V NL+Y ++L+++F GEV IY+P DR RGFAFV + A++
Sbjct: 1 MSIYVGNLSYEVVEEELKQIFLEYGEVKSIYLPMDRDAGRIRGFAFVEMGNDEQETTAIE 60
Query: 74 AMDGRMLDGRELRVQMARYGRPPSSSRSRGGR 105
++DG GR LRV A+ P S S GGR
Sbjct: 61 SLDGAEWMGRSLRVNKAK--PKPERSASGGGR 90
>gi|395394001|ref|NP_001257439.1| predicted gene 10256 [Mus musculus]
gi|395394006|ref|NP_001257440.1| predicted gene 10352 [Mus musculus]
gi|187956457|gb|AAI50671.1| Rbmy1a1 protein [Mus musculus]
Length = 380
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 57/97 (58%), Gaps = 9/97 (9%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
+ + L +T L+ +F R G V + + RDR T++SRGFAF+ F DA++A+ M
Sbjct: 10 IFIGGLNIKTRQKTLQEIFGRFGPVARVILMRDRETKKSRGFAFLTFRRLADAKNAVKEM 69
Query: 76 DGRMLDGRELRVQMAR---------YGRPPSSSRSRG 103
+G +LDG+ ++V+ AR RPPS SR+RG
Sbjct: 70 NGVILDGKRIKVKQARRPSSLESGSKKRPPSFSRTRG 106
>gi|15228279|ref|NP_187651.1| small nuclear ribonucleoprotein 31 kDa protein [Arabidopsis
thaliana]
gi|12322795|gb|AAG51392.1|AC011560_24 hypothetical protein; 114721-113936 [Arabidopsis thaliana]
gi|54261729|gb|AAV31168.1| At3g10400 [Arabidopsis thaliana]
gi|61656137|gb|AAX49371.1| At3g10400 [Arabidopsis thaliana]
gi|332641379|gb|AEE74900.1| small nuclear ribonucleoprotein 31 kDa protein [Arabidopsis
thaliana]
Length = 261
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 55/96 (57%), Gaps = 1/96 (1%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
+L V NL + T D+ +F G+V + + +DR TR+SRG AFV + + DA A +
Sbjct: 58 TLYVSNLDFSLTNSDIHTLFSTFGKVARVTVLKDRHTRQSRGVAFVLYVSREDAAKAARS 117
Query: 75 MDGRMLDGRELRVQMAR-YGRPPSSSRSRGGRDRDR 109
MD ++L+GR+L V +A GR + R +D+ R
Sbjct: 118 MDAKILNGRKLTVSIAADNGRASEFIKKRVYKDKSR 153
>gi|340959251|gb|EGS20432.1| hypothetical protein CTHT_0022620 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 190
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 60/114 (52%), Gaps = 12/114 (10%)
Query: 6 PPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDK 65
P +++ +L V NL++ TT + + +F +CGE+ + + DR+T+ GF FV ++
Sbjct: 46 PVVKLQNATTLYVGNLSFYTTEEQVYELFSKCGEIKRLVMGLDRYTKTPCGFCFVEYYTH 105
Query: 66 RDAEDALDAMDGRMLDGRELRVQMA-------RYGRPPSSSRSRGGRDRDRRRD 112
+DA D + + G LD R +R + +YGR S GG+ RD R+
Sbjct: 106 QDALDCMKYIGGTKLDERIIRTDLDPGFTEGRQYGRGKS-----GGQVRDEYRE 154
>gi|301093774|ref|XP_002997732.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262109981|gb|EEY68033.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 226
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 47/77 (61%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
+L V NL R DL+ +F + G V + D T+ESRGF FV F D RDAEDA+
Sbjct: 66 NLYVANLATRVGQQDLQDLFSKFGRVEKCEVIVDPVTKESRGFGFVTFEDVRDAEDAVKE 125
Query: 75 MDGRMLDGRELRVQMAR 91
++ + + GR++RV+ A+
Sbjct: 126 LNNQEVQGRKMRVEHAK 142
>gi|443323178|ref|ZP_21052187.1| RRM domain-containing RNA-binding protein [Gloeocapsa sp. PCC
73106]
gi|442787088|gb|ELR96812.1| RRM domain-containing RNA-binding protein [Gloeocapsa sp. PCC
73106]
Length = 95
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 51/91 (56%), Gaps = 3/91 (3%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
+S+ V NL Y+ T DL VF G V ++IP DR T +RGFAFV + + + A+
Sbjct: 1 MSIYVGNLNYKVTDSDLNDVFAEYGTVKRVHIPTDRDTGRARGFAFVEMETEAEEDAAIT 60
Query: 74 AMDGRMLDGRELRVQMARYGRPPSSSRSRGG 104
A+DG RE++V A +PP RS GG
Sbjct: 61 ALDGAEWMDREIKVNKA---KPPEKRRSFGG 88
>gi|345870896|ref|ZP_08822845.1| RNP-1 like RNA-binding protein [Thiorhodococcus drewsii AZ1]
gi|343921050|gb|EGV31774.1| RNP-1 like RNA-binding protein [Thiorhodococcus drewsii AZ1]
Length = 90
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 51/92 (55%), Gaps = 4/92 (4%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
+++ V NL+Y TT DLR F GEV + + D+FT +S+GF FV + A+ A+
Sbjct: 1 MNIYVGNLSYNTTDSDLREAFAPFGEVAQVNLISDKFTGQSKGFGFVEMPNNSHADAAIK 60
Query: 74 AMDGRMLDGRELRVQMARYGRPPSSSRSRGGR 105
++G L GR ++V A+ P S R GR
Sbjct: 61 GLNGTDLQGRSIKVNEAK----PRSDRGSSGR 88
>gi|449464240|ref|XP_004149837.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1-like isoform 1 [Cucumis sativus]
gi|449464242|ref|XP_004149838.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1-like isoform 2 [Cucumis sativus]
gi|449464244|ref|XP_004149839.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1-like isoform 3 [Cucumis sativus]
Length = 261
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
+L V N Y T DL +F G++ + + +DR TR+SRG AFV+F + DA A
Sbjct: 70 TLYVSNFDYSLTNSDLHTLFSNFGKIAHVTVLKDRQTRKSRGVAFVQFISQDDAVKAAKQ 129
Query: 75 MDGRMLDGRELRVQMAR-YGRPPSSSRSRGGRDRDR 109
M G++L+GR L+ +A GR R R +D+ R
Sbjct: 130 MHGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSR 165
>gi|448878334|gb|AGE46130.1| arginine/serine-rich splicing factor SCL28 transcript I [Sorghum
bicolor]
Length = 241
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 47/79 (59%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L + N++ P+D+R FE+ G + D+Y+PR+ TRE RGF FV+F DA A M
Sbjct: 59 LLIRNISLTARPEDIRVPFEQFGPIKDVYLPRNFHTRELRGFGFVKFRYPEDAAVAKQEM 118
Query: 76 DGRMLDGRELRVQMARYGR 94
+ +++ GRE+ + A R
Sbjct: 119 NHQVIGGREISIVYAEENR 137
>gi|425459046|ref|ZP_18838532.1| putative RNA-binding protein rbpA [Microcystis aeruginosa PCC 9808]
gi|440754722|ref|ZP_20933924.1| RNA recognition motif family protein [Microcystis aeruginosa
TAIHU98]
gi|389823286|emb|CCI28617.1| putative RNA-binding protein rbpA [Microcystis aeruginosa PCC 9808]
gi|440174928|gb|ELP54297.1| RNA recognition motif family protein [Microcystis aeruginosa
TAIHU98]
Length = 97
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 57/97 (58%), Gaps = 1/97 (1%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
+S+ V NL+Y + +DL VF+ G+V ++IP D+ T+ RGFAFV DK A++
Sbjct: 1 MSIFVGNLSYEISQEDLVEVFQDYGKVKRVHIPVDKETQRKRGFAFVEMEDKAQEAKAIE 60
Query: 74 AMDGRMLDGRELRVQMARYGRPPSSSRSRGGRDRDRR 110
A+DG GR ++V AR R + + GG DR +R
Sbjct: 61 ALDGADWMGRSIKVNEARE-REERAPFNGGGGDRKKR 96
>gi|449298181|gb|EMC94198.1| hypothetical protein BAUCODRAFT_74746 [Baudoinia compniacensis UAMH
10762]
Length = 178
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 62/120 (51%), Gaps = 17/120 (14%)
Query: 5 RPP-PRIEGMVS----LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAF 59
RPP P +E +S L V NL++ TT + + +F +CGE+ + + DRFT+ GF F
Sbjct: 35 RPPSPDLEEKLSSATTLYVGNLSFYTTEEQIHALFSKCGEIKRLVMGLDRFTKTPCGFCF 94
Query: 60 VRFFDKRDAEDALDAMDGRMLDGRELRVQMA-------RYGRPPSSSRSRGGRDRDRRRD 112
V ++ DA D L + G LD R +R + +YGR S GG+ RD R+
Sbjct: 95 VEYYTHADALDCLKYVGGTKLDERIIRCDLDEGFAEGRQYGRGKS-----GGQVRDEYRE 149
>gi|58269650|ref|XP_571981.1| glycine-rich RNA binding protein [Cryptococcus neoformans var.
neoformans JEC21]
gi|134113905|ref|XP_774200.1| hypothetical protein CNBG1820 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50256835|gb|EAL19553.1| hypothetical protein CNBG1820 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57228217|gb|AAW44674.1| glycine-rich RNA binding protein, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 161
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 47/75 (62%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
+ V NL++ +T D L +VF G V D + +DR T SRGF FV + ++AE A+ AM
Sbjct: 6 VYVGNLSWNSTDDTLLQVFSAYGTVTDCIVMKDRETGRSRGFGFVTYGSPQEAEAAIAAM 65
Query: 76 DGRMLDGRELRVQMA 90
+ + LDGR +RV MA
Sbjct: 66 NEQELDGRRVRVNMA 80
>gi|374584597|ref|ZP_09657689.1| RNP-1 like RNA-binding protein [Leptonema illini DSM 21528]
gi|373873458|gb|EHQ05452.1| RNP-1 like RNA-binding protein [Leptonema illini DSM 21528]
Length = 109
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 44/76 (57%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L V L++ TT LR FE G V + + DR+T +SRGF FV F D+ A A+ AM
Sbjct: 5 LYVGGLSWDTTDTTLRHSFEAHGSVHEAIVVMDRYTGKSRGFGFVTFADENSARTAISAM 64
Query: 76 DGRMLDGRELRVQMAR 91
+G LDGR + V A+
Sbjct: 65 NGTDLDGRSITVSEAQ 80
>gi|50552081|ref|XP_503515.1| YALI0E03828p [Yarrowia lipolytica]
gi|74689524|sp|Q6C747.1|EIF3G_YARLI RecName: Full=Eukaryotic translation initiation factor 3 subunit G;
Short=eIF3g; AltName: Full=Eukaryotic translation
initiation factor 3 RNA-binding subunit; Short=eIF-3
RNA-binding subunit; AltName: Full=Translation
initiation factor eIF3 p33 subunit homolog; Short=eIF3
p33 homolog
gi|49649384|emb|CAG79094.1| YALI0E03828p [Yarrowia lipolytica CLIB122]
Length = 294
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 49/78 (62%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
++L+V NL+ T DDLRR+F + G + +Y+ +DR T RGFAFV + K A+ AL+
Sbjct: 214 LTLRVTNLSEEATDDDLRRMFGKYGMINRVYVAKDRDTGRPRGFAFVTYTLKSHAQAALE 273
Query: 74 AMDGRMLDGRELRVQMAR 91
AMDG D ++V ++
Sbjct: 274 AMDGHGFDNLIMKVDYSK 291
>gi|428309319|ref|YP_007120296.1| RRM domain-containing RNA-binding protein [Microcoleus sp. PCC
7113]
gi|428250931|gb|AFZ16890.1| RRM domain-containing RNA-binding protein [Microcoleus sp. PCC
7113]
Length = 101
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 54/102 (52%), Gaps = 3/102 (2%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
+S+ V NL+Y T +D+R VF G V ++ +P+DR T RGFAFV + A++
Sbjct: 1 MSIYVGNLSYDVTEEDIREVFAEYGTVNNVTLPKDRETGRKRGFAFVEMGTDEEETAAIE 60
Query: 74 AMDGRMLDGRELRVQMARYGRPPSSSRSRGGRDRDRRRDRSR 115
A+DG GR L+V A +P ++ GG R SR
Sbjct: 61 ALDGAEWMGRNLKVNKA---KPREDNKPFGGGSRSNNFKSSR 99
>gi|86606333|ref|YP_475096.1| RNA-binding protein [Synechococcus sp. JA-3-3Ab]
gi|86554875|gb|ABC99833.1| putative RNA-binding protein [Synechococcus sp. JA-3-3Ab]
Length = 96
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 57/100 (57%), Gaps = 5/100 (5%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
+++ V NL+++ + +DLR VF G V I +P DR T RGFAFV ++ D + A+D
Sbjct: 1 MTIFVGNLSFKASEEDLRLVFSEYGTVKQIKLPVDRETGRKRGFAFVELENEADEQKAID 60
Query: 74 AMDGRMLDGRELRVQMARYGRPPSSSRSRGGRDRDRRRDR 113
+DG GR+LRV A P + + GGR RD R R
Sbjct: 61 ELDGATWMGRDLRVNKAM----PRQAGAGGGR-RDSRSSR 95
>gi|298492825|ref|YP_003723002.1| RNP-1 like RNA-binding protein ['Nostoc azollae' 0708]
gi|298234743|gb|ADI65879.1| RNP-1 like RNA-binding protein ['Nostoc azollae' 0708]
Length = 101
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 52/91 (57%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
+S+ V NL+Y+ T DDL++ F G+V + +P DR T RGFAFV + A++
Sbjct: 1 MSIYVGNLSYQVTEDDLKQAFAEYGKVSRVQLPTDRETGRLRGFAFVEMETEDQETAAIE 60
Query: 74 AMDGRMLDGRELRVQMARYGRPPSSSRSRGG 104
A+DG GR+L+V A+ P +S R G
Sbjct: 61 ALDGAEWMGRDLKVNKAKPREPRTSPRGNWG 91
>gi|448878316|gb|AGE46121.1| arginine/serine-rich splicing factor SC30 transcript II [Sorghum
bicolor]
Length = 188
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/53 (60%), Positives = 39/53 (73%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAF 59
PP I SL V N+T+RTT DDL +F++ GE+ DIYIPRDR T +SRGFAF
Sbjct: 9 PPPIRDTYSLLVLNITFRTTADDLFPLFDKYGEIVDIYIPRDRRTGDSRGFAF 61
>gi|307719265|ref|YP_003874797.1| RNA-binding region RNP-1 [Spirochaeta thermophila DSM 6192]
gi|386347364|ref|YP_006045613.1| RNP-1 like RNA-binding protein [Spirochaeta thermophila DSM 6578]
gi|306532990|gb|ADN02524.1| RNA-binding region RNP-1 [Spirochaeta thermophila DSM 6192]
gi|339412331|gb|AEJ61896.1| RNP-1 like RNA-binding protein [Spirochaeta thermophila DSM 6578]
Length = 101
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 55/106 (51%), Gaps = 10/106 (9%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
+ NL Y+TT D LR++FE+ GEV + I DR + S+GF FV + E A+ A+
Sbjct: 5 IYAGNLNYQTTEDTLRQLFEQYGEVESVKIITDRDSGFSKGFGFVEMASEEAGEAAISAL 64
Query: 76 DGRMLDGRELRVQMARYGRPPSSSRSRGGRDRDRRRDRSRSRDRRY 121
+ +DGR+LRV A RGGR DRSR RY
Sbjct: 65 NQHEVDGRQLRVNKA---------HERGGRS-SFGGDRSRGSSYRY 100
>gi|302679630|ref|XP_003029497.1| hypothetical protein SCHCODRAFT_85789 [Schizophyllum commune
H4-8]
gi|300103187|gb|EFI94594.1| hypothetical protein SCHCODRAFT_85789 [Schizophyllum commune
H4-8]
Length = 174
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 47/75 (62%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
+ V NL++ TT D LR+ F G+V D + RDR T SRGF FV F +AE A+ ++
Sbjct: 5 VYVGNLSWNTTDDTLRQAFSNFGQVLDSIVMRDRETGRSRGFGFVTFSSSGEAESAISSL 64
Query: 76 DGRMLDGRELRVQMA 90
+ + LDGR ++V +A
Sbjct: 65 NEQELDGRRIKVNLA 79
>gi|58269652|ref|XP_571982.1| glycine-rich RNA binding protein [Cryptococcus neoformans var.
neoformans JEC21]
gi|57228218|gb|AAW44675.1| glycine-rich RNA binding protein, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 182
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 47/76 (61%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
+ V NL++ +T D L +VF G V D + +DR T SRGF FV + ++AE A+ AM
Sbjct: 6 VYVGNLSWNSTDDTLLQVFSAYGTVTDCIVMKDRETGRSRGFGFVTYGSPQEAEAAIAAM 65
Query: 76 DGRMLDGRELRVQMAR 91
+ + LDGR +RV MA
Sbjct: 66 NEQELDGRRVRVNMAN 81
>gi|355687312|gb|EHH25896.1| hypothetical protein EGK_15753, partial [Macaca mulatta]
Length = 148
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 63/127 (49%), Gaps = 15/127 (11%)
Query: 29 DLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAMDGRMLDGRELRVQ 88
DL F R + D+Y+P D +T RG A+V+ D RDAEDAL +D + + G ++R+
Sbjct: 23 DLWHEFGRYDPIVDVYVPLDFYTHCPRGVAYVQLEDVRDAEDALPNLDRKWICGCQMRI- 81
Query: 89 MARYGRPPSSSRSRGGRD----------RDRRRDRSRSRDRRYTRSRSFSSRSRSGSKSP 138
GRPP+ +++ GR R RSRSR Y RS S R + P
Sbjct: 82 ----GRPPNQMKAKEGRSVYSSSRYDSRSQRYERRSRSRTFIYIYRRSNSPRKGGWTGRP 137
Query: 139 RKARSKS 145
+RS S
Sbjct: 138 SCSRSHS 144
>gi|255639915|gb|ACU20250.1| unknown [Glycine max]
Length = 270
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 46/75 (61%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L V NL P+DLR FER G V D+Y+P++ +T E RGF FV++ DA +A +
Sbjct: 51 LLVRNLPLDARPEDLRIPFERYGPVKDVYLPKNYYTGEPRGFGFVKYRYGEDAAEAKQHL 110
Query: 76 DGRMLDGRELRVQMA 90
+ ++ GRE+R+ A
Sbjct: 111 NHTIIGGREIRIVFA 125
>gi|321260943|ref|XP_003195191.1| glycine-rich RNA binding protein [Cryptococcus gattii WM276]
gi|317461664|gb|ADV23404.1| Glycine-rich RNA binding protein, putative [Cryptococcus gattii
WM276]
Length = 177
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 47/76 (61%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
+ V NL++ +T D L +VF G V D + +DR T SRGF FV + ++AE A+ AM
Sbjct: 6 VYVGNLSWNSTDDTLLQVFSAYGTVTDCIVMKDRETGRSRGFGFVTYGSPQEAEAAIAAM 65
Query: 76 DGRMLDGRELRVQMAR 91
+ + LDGR +RV MA
Sbjct: 66 NEQELDGRRVRVNMAN 81
>gi|392882418|gb|AFM90041.1| cold-inducible RNA-binding protein-like protein [Callorhinchus
milii]
gi|392884370|gb|AFM91017.1| cold-inducible RNA-binding protein-like protein [Callorhinchus
milii]
Length = 178
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 46/75 (61%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L V + + T L VF + G+V ++ + R+R T+ S+GF FV F + DA DAL M
Sbjct: 7 LFVGGINFETDEQTLEEVFAKYGDVSEVIVIRERDTQRSKGFGFVTFENPDDARDALAGM 66
Query: 76 DGRMLDGRELRVQMA 90
+G+ +DGR++RV A
Sbjct: 67 NGKTVDGRQIRVDHA 81
>gi|302760313|ref|XP_002963579.1| hypothetical protein SELMODRAFT_8343 [Selaginella moellendorffii]
gi|302799491|ref|XP_002981504.1| hypothetical protein SELMODRAFT_8339 [Selaginella moellendorffii]
gi|300150670|gb|EFJ17319.1| hypothetical protein SELMODRAFT_8339 [Selaginella moellendorffii]
gi|300168847|gb|EFJ35450.1| hypothetical protein SELMODRAFT_8343 [Selaginella moellendorffii]
Length = 79
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 44/68 (64%)
Query: 27 PDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAMDGRMLDGRELR 86
P+++R FE+ G V D+Y+P+D ++ E RGF FV+F + DA DA MD ++L GRE+
Sbjct: 3 PEEVRVPFEKFGPVKDVYLPKDYYSGEPRGFGFVQFIEPGDAADAKFNMDHQLLGGREIT 62
Query: 87 VQMARYGR 94
V A R
Sbjct: 63 VVFAEENR 70
>gi|282896900|ref|ZP_06304906.1| RNA-binding region protein RNP-1 [Raphidiopsis brookii D9]
gi|281198309|gb|EFA73199.1| RNA-binding region protein RNP-1 [Raphidiopsis brookii D9]
Length = 92
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
+++ + NL+YR T DL+ VF GEV + +P DR T + RGFAFV + + A+
Sbjct: 1 MTIYIGNLSYRATEADLKSVFADYGEVKRVVLPTDRETGKMRGFAFVEMIEDAQEDAAIS 60
Query: 74 AMDGRMLDGRELRVQMARYGRPPSSSRSRGGRDR 107
+DG GR+LRV A +P +R R G +
Sbjct: 61 ELDGAEWMGRQLRVNKA---KPKEENRPRKGHSK 91
>gi|428779944|ref|YP_007171730.1| RRM domain-containing RNA-binding protein [Dactylococcopsis salina
PCC 8305]
gi|428694223|gb|AFZ50373.1| RRM domain-containing RNA-binding protein [Dactylococcopsis salina
PCC 8305]
Length = 95
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 52/97 (53%), Gaps = 3/97 (3%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
+S+ V NL Y T DDL VF G V +++P DR T RGF FV + + +A+
Sbjct: 1 MSIYVGNLDYSVTQDDLSEVFAEYGTVKRVHLPTDRETGRMRGFGFVEMASETEESNAIS 60
Query: 74 AMDGRMLDGRELRVQMARYGRPPSSSRSRGGRDRDRR 110
+DG GREL+V A RP + S GG R+RR
Sbjct: 61 ELDGAEWMGRELKVNPA---RPRENKSSFGGGRRNRR 94
>gi|425453862|ref|ZP_18833615.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9807]
gi|389799968|emb|CCI20517.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9807]
Length = 97
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 54/97 (55%), Gaps = 1/97 (1%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
+S+ V NL + +D+ VF G + +++P DR T+ RGFAFV A+
Sbjct: 1 MSIYVGNLPFEVDQNDVVEVFTEYGTIKRVHLPMDRETKRKRGFAFVEMETPEQESAAIA 60
Query: 74 AMDGRMLDGRELRVQMARYGRPPSSSRSRGGRDRDRR 110
A+DG GREL+V AR + P SS + G R+R+RR
Sbjct: 61 ALDGAQWMGRELKVNQAR-EKEPRSSFAGGDRNRERR 96
>gi|328848768|gb|EGF97966.1| hypothetical protein MELLADRAFT_84111 [Melampsora larici-populina
98AG31]
Length = 695
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 63/110 (57%), Gaps = 15/110 (13%)
Query: 2 SYGRPPPRIEG------MVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESR 55
SY P PR G L V +L + T DDLR+VF+ G++ + + RD+ T +S+
Sbjct: 415 SYVAPKPRGPGPNDPNSYARLYVGSLNFNLTDDDLRQVFQPFGDIEYVDLHRDQITGKSK 474
Query: 56 GFAF-------VRFFDKRDAEDALDAMDGRMLDGRELRVQMARYGRPPSS 98
G+AF +RF + DA++A++ M+G L GR LRV++ +PP++
Sbjct: 475 GYAFTLLTCVNIRFKNMHDAKNAMEKMNGFQLAGRALRVEIK--AQPPAA 522
Score = 35.8 bits (81), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Query: 13 MVSLKVDNLTYRTTPDDLRRVFER-CGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDA 71
M S+ V L+ R +L + FE+ G+V D + DR +R S+G +V F + + A
Sbjct: 305 MRSVFVSQLSARVGDRELSQFFEQQAGKVRDARVITDRISRRSKGVGYVEFRELDSVQKA 364
Query: 72 LDAMDGRMLDGRELRVQ 88
L A+ G L G + VQ
Sbjct: 365 L-ALTGTKLLGLPVMVQ 380
>gi|384488552|gb|EIE80732.1| hypothetical protein RO3G_05437 [Rhizopus delemar RA 99-880]
Length = 238
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 55/101 (54%), Gaps = 2/101 (1%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
+L + LT RT DL +F + G+V I D TRESRGF F+R + DAE AL+
Sbjct: 62 NLFITGLTIRTNGADLEDIFGKYGKVIKAEIMYDPHTRESRGFGFIRMANAEDAERALNG 121
Query: 75 MDGRMLDGRELRVQMARYGRP--PSSSRSRGGRDRDRRRDR 113
+ G +DGR + V+ A+ RP P+ R G R RDR
Sbjct: 122 VSGTEIDGRVVTVEKAKRSRPRTPTPGRYYGPPKRGPPRDR 162
>gi|225706362|gb|ACO09027.1| Cold-inducible RNA-binding protein [Osmerus mordax]
Length = 172
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 49/75 (65%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L V L++ T L VF + G++ ++ + +DR T+ SRGF FV F + +A+DA+ AM
Sbjct: 7 LFVGGLSFDTNEQSLEDVFSKYGQISEVVVIKDRETQRSRGFGFVTFDNPDEAKDAMLAM 66
Query: 76 DGRMLDGRELRVQMA 90
+G+ LDGR++RV A
Sbjct: 67 NGKSLDGRQIRVDQA 81
>gi|452984713|gb|EME84470.1| hypothetical protein MYCFIDRAFT_203037 [Pseudocercospora fijiensis
CIRAD86]
Length = 343
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 68/125 (54%), Gaps = 7/125 (5%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L+VDN+ Y T DDLR +FER G + + DR R S+G A+V + D+RDA DAL
Sbjct: 101 LRVDNIHYELTEDDLRELFERVGPTLSVRLLYDRQDR-SQGTAYVIYEDERDARDALHKF 159
Query: 76 DGRMLDGRELRVQMARYGRPPSSSRSRGGRDRDRRRDRSRSRDRRYTRSRSFSSRSRSGS 135
DG+ +G+ +R+ + G P + RG DR R+ RS + R S SR G
Sbjct: 160 DGQNANGQPIRISLMPSG-PSRDAPPRGIADRIERQPRS-----IFDRITSSRDDSRDGG 213
Query: 136 KSPRK 140
+ PR+
Sbjct: 214 RRPRQ 218
>gi|387914322|gb|AFK10770.1| cold-inducible RNA-binding protein-like protein [Callorhinchus
milii]
gi|392876160|gb|AFM86912.1| cold-inducible RNA-binding protein-like protein [Callorhinchus
milii]
Length = 133
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 48/76 (63%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L V L++ T L VF G++ ++ + +DR T+ SRGF F+ F + DA+DAL AM
Sbjct: 7 LFVGGLSFSTDEQSLEEVFSEYGQISEVRVIKDRDTQLSRGFGFITFENPGDAKDALLAM 66
Query: 76 DGRMLDGRELRVQMAR 91
+G+ +DGR++RV A
Sbjct: 67 NGKSIDGRQIRVDQAE 82
>gi|351709838|gb|EHB12757.1| FUS-interacting serine-arginine-rich protein 1, partial
[Heterocephalus glaber]
Length = 262
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 39/64 (60%)
Query: 28 DDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAMDGRMLDGRELRV 87
+D RR F CG D+Y+P D + R RGFA+V+F D DAED L +D + + G + +
Sbjct: 24 EDSRREFGSCGPTVDVYVPLDFYIRRPRGFAYVQFEDVCDAEDVLHNLDRKWICGHQTEI 83
Query: 88 QMAR 91
Q A+
Sbjct: 84 QFAQ 87
>gi|423067018|ref|ZP_17055808.1| RNP-1 like RNA-binding protein [Arthrospira platensis C1]
gi|406711304|gb|EKD06505.1| RNP-1 like RNA-binding protein [Arthrospira platensis C1]
Length = 86
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 50/88 (56%), Gaps = 3/88 (3%)
Query: 21 LTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAMDGRML 80
++Y TPDDL VF + G V IP DR T SRGF FV ++ + A++A+DG
Sbjct: 1 MSYDVTPDDLSEVFAQYGTVKRSMIPTDRETGRSRGFGFVEMVNEDEETKAIEALDGAEW 60
Query: 81 DGRELRVQMARYGRPPSSSRSRGGRDRD 108
GR L+V A RP +++ RGG RD
Sbjct: 61 MGRSLKVNKA---RPRENNKQRGGFKRD 85
>gi|354568213|ref|ZP_08987379.1| RNP-1 like RNA-binding protein [Fischerella sp. JSC-11]
gi|353541178|gb|EHC10648.1| RNP-1 like RNA-binding protein [Fischerella sp. JSC-11]
Length = 103
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 49/88 (55%), Gaps = 3/88 (3%)
Query: 7 PPRIEGMV---SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFF 63
PP IE V ++ V NL+Y T +DL+ VF G+V + +P DR T RGFAFV
Sbjct: 2 PPPIETYVIQMTIYVGNLSYSATEEDLKAVFAEYGQVKRVVLPTDRDTGRLRGFAFVEMN 61
Query: 64 DKRDAEDALDAMDGRMLDGRELRVQMAR 91
+ E A+ +DG GR+L+V AR
Sbjct: 62 EDTQEEAAITELDGAEWMGRQLKVNKAR 89
>gi|402217291|gb|EJT97372.1| RNA-binding domain-containing protein [Dacryopinax sp. DJM-731
SS1]
Length = 167
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Query: 17 KVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAMD 76
+ NL++ T D LR F + G+V D + +DR + SRGF FV F ++A+ A+D ++
Sbjct: 16 HIGNLSWNTNDDTLRSAFSQFGQVLDCIVMKDRESGRSRGFGFVTFGTSQEAQAAIDGLN 75
Query: 77 GRMLDGRELRVQMARYGRPP 96
+ LDGR +RV +A RPP
Sbjct: 76 EQDLDGRRIRVNLAN-ARPP 94
>gi|434396627|ref|YP_007130631.1| RNP-1 like RNA-binding protein [Stanieria cyanosphaera PCC 7437]
gi|428267724|gb|AFZ33665.1| RNP-1 like RNA-binding protein [Stanieria cyanosphaera PCC 7437]
Length = 102
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 45/78 (57%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
+S+ V N+ Y T +DL +F G V +Y+P DR T RGF FV ++ + + A++
Sbjct: 1 MSIYVGNIPYEVTQEDLSSIFAEYGTVTRVYLPVDRETGRMRGFGFVEMSNETEEDQAIE 60
Query: 74 AMDGRMLDGRELRVQMAR 91
+DG GRELRV AR
Sbjct: 61 TLDGAEWMGRELRVNKAR 78
>gi|392404677|ref|YP_006441289.1| RNP-1 like RNA-binding protein [Turneriella parva DSM 21527]
gi|390612631|gb|AFM13783.1| RNP-1 like RNA-binding protein [Turneriella parva DSM 21527]
Length = 141
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 47/78 (60%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
+++ V NL Y T ++LR FE G+V + I RDR T SRGFAFV D A++A+
Sbjct: 1 MNIYVGNLAYNATDEELRSAFEAFGQVTSVKIVRDRDTGRSRGFAFVEMEDGEGAQNAVA 60
Query: 74 AMDGRMLDGRELRVQMAR 91
M+G+ L GR L V AR
Sbjct: 61 EMNGKDLKGRNLVVNEAR 78
>gi|350535477|ref|NP_001233126.1| cold-inducible RNA-binding protein [Sus scrofa]
gi|330847371|gb|AEC46651.1| cold inducible RNA binding protein transcript variant 3 [Sus
scrofa]
Length = 144
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 49/75 (65%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L V L++ T L +VF + G++ ++ + +DR T+ SR F FV F + DA+DA+ AM
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRDFGFVTFENIDDAKDAMMAM 67
Query: 76 DGRMLDGRELRVQMA 90
+G+ +DGR++RV A
Sbjct: 68 NGKSVDGRQIRVDQA 82
>gi|282896319|ref|ZP_06304341.1| RNA-binding region protein RNP-1 [Raphidiopsis brookii D9]
gi|281198815|gb|EFA73694.1| RNA-binding region protein RNP-1 [Raphidiopsis brookii D9]
Length = 104
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 47/78 (60%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
+S+ V NL+Y T +DL+ F + G V + +P DR T RGF FV ++ + A+D
Sbjct: 1 MSIYVGNLSYDVTLEDLKSAFSKYGNVSKVQLPTDRETGRPRGFGFVEMSNEAEENAAID 60
Query: 74 AMDGRMLDGRELRVQMAR 91
A++G+ GR+L+V AR
Sbjct: 61 ALNGKEFKGRQLKVNKAR 78
>gi|357144628|ref|XP_003573359.1| PREDICTED: nucleolin-like [Brachypodium distachyon]
Length = 153
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
+L V L+ RTT D LR F + GEV + DR T S+GF FVR+ DA ++
Sbjct: 49 NLFVSGLSKRTTTDGLREAFAKFGEVMHARVVTDRVTGFSKGFGFVRYASVEDASKGIEG 108
Query: 75 MDGRMLDGRELRVQMARYGRP 95
MDG+ LDG V A Y RP
Sbjct: 109 MDGKFLDG---WVIFAEYARP 126
>gi|291190353|ref|NP_001167243.1| Polyadenylate-binding protein 2 [Salmo salar]
gi|223648842|gb|ACN11179.1| Polyadenylate-binding protein 2 [Salmo salar]
Length = 237
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 62/117 (52%), Gaps = 4/117 (3%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
S+ V N+ Y T ++L F CG V + I D+FT +GFA++ F DK A+ A
Sbjct: 103 SIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFTGHPKGFAYIEFSDKESVRTAM-A 161
Query: 75 MDGRMLDGRELRVQMARYGRPPSSSRSRGGRDRDRRRDRSRSRDRRYTRSRSFSSRS 131
+D + GR+++V + R RP S+ RG R R RSR + +R+R +S +
Sbjct: 162 LDESLFRGRQIKVGVKRTNRPGISTTDRG---FPRARFRSRGGNFNPSRARYYSGYT 215
>gi|449434572|ref|XP_004135070.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1-like [Cucumis sativus]
Length = 234
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
+L V N Y T DL +F G++ + + +DR TR+SRG AFV+F + DA A
Sbjct: 70 TLYVSNFDYSLTNSDLHTLFSNFGKIARVTVLKDRQTRKSRGVAFVQFISQDDAVKAAKQ 129
Query: 75 MDGRMLDGRELRVQMAR-YGRPPSSSRSRGGRDRDR 109
M G++L+GR L+ +A GR R R +D+ R
Sbjct: 130 MHGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSR 165
>gi|431931272|ref|YP_007244318.1| RRM domain-containing RNA-binding protein [Thioflavicoccus mobilis
8321]
gi|431829575|gb|AGA90688.1| RRM domain-containing RNA-binding protein [Thioflavicoccus mobilis
8321]
Length = 94
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 53/93 (56%), Gaps = 5/93 (5%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
+++ V NL Y T D+LR F GE+ + + D+FT +S+GF FV + +A+ A+
Sbjct: 1 MNIYVGNLAYGVTEDELREAFGAFGEISSVSVITDKFTGQSKGFGFVEMPNNSEADAAIK 60
Query: 74 AMDGRMLDGRELRVQMA--RYGRPPSSSRSRGG 104
A++ L GR +RV A R RPP RS GG
Sbjct: 61 ALNETPLKGRNIRVNEARPRAERPP---RSGGG 90
>gi|336371226|gb|EGN99565.1| hypothetical protein SERLA73DRAFT_159820 [Serpula lacrymans var.
lacrymans S7.3]
Length = 127
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
+ V NL++ TT D LR F G+V D + RDR T SRGF FV F +++AE A++++
Sbjct: 5 VYVGNLSWSTTDDTLREAFSEYGQVVDSIVMRDRETGRSRGFGFVTFSSEQEAEAAINSL 64
Query: 76 DGRMLDGRELRVQMARYGRP 95
+ LDGR ++V +A RP
Sbjct: 65 HEQDLDGRRIKVNLAN-ARP 83
>gi|386346963|ref|YP_006045212.1| RNP-1 like RNA-binding protein [Spirochaeta thermophila DSM 6578]
gi|339411930|gb|AEJ61495.1| RNP-1 like RNA-binding protein [Spirochaeta thermophila DSM 6578]
Length = 100
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 46/76 (60%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
+ V NL Y+TT D LR++FE+ GEV + I DR + S+GF FV + E A+ A+
Sbjct: 5 IYVGNLNYQTTEDTLRQLFEQYGEVESVKIITDRDSGFSKGFGFVEMASEEAGEAAISAL 64
Query: 76 DGRMLDGRELRVQMAR 91
+ L+GR+LRV A
Sbjct: 65 NQHELEGRQLRVNKAH 80
>gi|71001020|ref|XP_755191.1| small subunit of nuclear cap-binding protein complex [Aspergillus
fumigatus Af293]
gi|66852829|gb|EAL93153.1| small subunit of nuclear cap-binding protein complex [Aspergillus
fumigatus Af293]
gi|159129280|gb|EDP54394.1| small subunit of nuclear cap-binding protein complex [Aspergillus
fumigatus A1163]
Length = 184
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 59/114 (51%), Gaps = 12/114 (10%)
Query: 6 PPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDK 65
P +++ +L V NL++ TT + + +F +CGE+ + + DR+ + GF FV ++
Sbjct: 47 PIDKLKNATTLYVGNLSFYTTEEQIHELFSKCGEIKRLVMGLDRYNKTPCGFCFVEYYTH 106
Query: 66 RDAEDALDAMDGRMLDGRELRVQMA-------RYGRPPSSSRSRGGRDRDRRRD 112
+DA D L + G LD R +R + +YGR S GG+ RD R+
Sbjct: 107 QDALDCLKYIGGTKLDERIIRTDLDPGFEEGRQYGRGKS-----GGQVRDEYRE 155
>gi|307718869|ref|YP_003874401.1| hypothetical protein STHERM_c11870 [Spirochaeta thermophila DSM
6192]
gi|306532594|gb|ADN02128.1| hypothetical protein STHERM_c11870 [Spirochaeta thermophila DSM
6192]
Length = 100
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 46/76 (60%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
+ V NL Y+TT D LR++FE+ GEV + I DR + S+GF FV + E A+ A+
Sbjct: 5 IYVGNLNYQTTEDTLRQLFEQYGEVESVKIITDRDSGFSKGFGFVEMSSEEAGEAAISAL 64
Query: 76 DGRMLDGRELRVQMAR 91
+ L+GR+LRV A
Sbjct: 65 NQHELEGRQLRVNKAH 80
>gi|553620|gb|AAA60162.1| splicing factor, partial [Homo sapiens]
Length = 34
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/34 (85%), Positives = 31/34 (91%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVF 34
MSYGRPPP +EGM SLKVDNLTYRT+PD LRRVF
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVF 34
>gi|388503430|gb|AFK39781.1| unknown [Medicago truncatula]
Length = 336
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 45/76 (59%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
L V NL P+DLR FER G V D+Y+PR+ +T E RGF FV++ DA A
Sbjct: 49 GLLVRNLPLDARPEDLRGPFERYGPVKDVYLPRNYYTGEPRGFGFVKYRHGEDAAGAKQQ 108
Query: 75 MDGRMLDGRELRVQMA 90
++ ++ GRE+R+ A
Sbjct: 109 LNHTIIGGREIRIVFA 124
>gi|115456445|ref|NP_001051823.1| Os03g0836200 [Oryza sativa Japonica Group]
gi|40714682|gb|AAR88588.1| putative RNA binding protein [Oryza sativa Japonica Group]
gi|108711961|gb|ABF99756.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|108711962|gb|ABF99757.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|108711963|gb|ABF99758.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|108711964|gb|ABF99759.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113550294|dbj|BAF13737.1| Os03g0836200 [Oryza sativa Japonica Group]
gi|125546344|gb|EAY92483.1| hypothetical protein OsI_14220 [Oryza sativa Indica Group]
gi|125588547|gb|EAZ29211.1| hypothetical protein OsJ_13272 [Oryza sativa Japonica Group]
gi|215695067|dbj|BAG90258.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215715212|dbj|BAG94963.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215764998|dbj|BAG86695.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 205
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 58/104 (55%), Gaps = 8/104 (7%)
Query: 18 VDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAMDG 77
+ NL++ TT + L+ F + G + + + D+++ SRGF FV F +K+ EDA++ M+G
Sbjct: 11 IGNLSWSTTDESLKDAFGKFGNLTEAKVVFDKYSGRSRGFGFVTFDEKKAMEDAIEGMNG 70
Query: 78 RMLDGRELRVQMARYGRPPSSSRSRGGRDRDRRRDRSRSRDRRY 121
LDGR + V A+ P GRDR+ RD R R RY
Sbjct: 71 LDLDGRAITVDKAQPQGP--------GRDRNGDRDYDRDRGSRY 106
>gi|71000080|ref|XP_754757.1| glycine-rich RNA-binding protein [Aspergillus fumigatus Af293]
gi|66852394|gb|EAL92719.1| glycine-rich RNA-binding protein, putative [Aspergillus fumigatus
Af293]
gi|159127765|gb|EDP52880.1| glycine-rich RNA-binding protein, putative [Aspergillus fumigatus
A1163]
Length = 118
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 53/97 (54%), Gaps = 2/97 (2%)
Query: 13 MVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDAL 72
M L + L + TT D LR+ FE G V + + +DR T SRGF FVRF +A+ A+
Sbjct: 1 MSKLFIGGLAWHTTDDALRQGFEPYGVVEEAIVVKDRDTNRSRGFGFVRFSSDTEADAAM 60
Query: 73 DAMDGRMLDGRELRVQMA--RYGRPPSSSRSRGGRDR 107
DAM+ + DGR +RV A R R RGG ++
Sbjct: 61 DAMNNQEFDGRTIRVDKASERPARNNGGFHGRGGYNQ 97
>gi|443647612|ref|ZP_21129748.1| RNA recognition motiffamily protein [Microcystis aeruginosa
DIANCHI905]
gi|159026368|emb|CAO88919.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|443335466|gb|ELS49937.1| RNA recognition motiffamily protein [Microcystis aeruginosa
DIANCHI905]
Length = 97
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 57/97 (58%), Gaps = 1/97 (1%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
+S+ V NL+Y + +DL VF+ G+V ++IP D+ T+ RGFAFV DK A++
Sbjct: 1 MSIFVGNLSYEISQEDLVEVFQDYGKVKRVHIPVDKDTQRKRGFAFVEMEDKAQEAKAIE 60
Query: 74 AMDGRMLDGRELRVQMARYGRPPSSSRSRGGRDRDRR 110
A+DG GR ++V AR R + + GG DR +R
Sbjct: 61 ALDGADWMGRSIKVNEARE-REERAPFNGGGGDRKKR 96
>gi|326505708|dbj|BAJ95525.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 226
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 58/96 (60%), Gaps = 4/96 (4%)
Query: 18 VDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAMDG 77
V NL++ TT + L+ F + G+V + + D+F+ SRGFAFV F +K+ E+A++ M+G
Sbjct: 11 VGNLSWSTTDESLKDAFSKYGKVTEAKVVMDKFSGRSRGFAFVTFDEKKAMEEAIEDMNG 70
Query: 78 RMLDGRELRVQMARYGRPPSSSRSRGGRDRDRRRDR 113
L+GR + V A +P R R G DRD RDR
Sbjct: 71 LDLEGRAITVDKA---QPQGVGRDRNG-DRDFDRDR 102
>gi|145346140|ref|XP_001417551.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577778|gb|ABO95844.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 92
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 56/92 (60%), Gaps = 1/92 (1%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
VS+ V N+++ DD+R F+ G V D+Y+P+DR T RG AFV++ + +A+DA++
Sbjct: 1 VSVLVRNISFDAHEDDIRDKFQAYGNVLDVYMPKDRETGRKRGLAFVKYAIQGEADDAVE 60
Query: 74 AMDGRMLDGRELRVQMARYGRP-PSSSRSRGG 104
G + GRE+R ++A R P R RGG
Sbjct: 61 KATGMDIMGREVRCEIANERRKNPDEMRGRGG 92
>gi|159026366|emb|CAO88917.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 97
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 57/97 (58%), Gaps = 1/97 (1%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
+S+ V NL+Y + +DL VF+ G+V ++IP D+ T+ RGFAFV DK A++
Sbjct: 1 MSIFVGNLSYEISQEDLVEVFQDYGKVKRVHIPVDKDTQRKRGFAFVEMEDKAQEAKAIE 60
Query: 74 AMDGRMLDGRELRVQMARYGRPPSSSRSRGGRDRDRR 110
A+DG GR ++V AR R + + GG DR +R
Sbjct: 61 ALDGADWMGRSIKVNEAR-DREERAPFNGGGGDRKKR 96
>gi|47086087|ref|NP_998424.1| polyadenylate-binding protein nuclear 1 isoform 1 [Danio rerio]
gi|46250394|gb|AAH68437.1| Zgc:85979 [Danio rerio]
gi|50925993|gb|AAH79522.1| Pabpn1 protein [Danio rerio]
gi|182889100|gb|AAI64644.1| Pabpn1 protein [Danio rerio]
Length = 284
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 63/127 (49%), Gaps = 14/127 (11%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
S+ V N+ Y T ++L F CG V + I D+FT +GFA++ F DK A+ A
Sbjct: 99 SIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFTGHPKGFAYIEFADKESVRTAM-A 157
Query: 75 MDGRMLDGRELRVQMARYGRPPSSSRSRGGRDRDRRRDRSRSRDRRYTRSRSFSSRSR-- 132
+D + GR+++V R RP S+ DR R R +R +FSSR+R
Sbjct: 158 LDESLFRGRQIKVGAKRTNRPGIST-----------TDRGFPRARFRSRGGNFSSRARYY 206
Query: 133 SGSKSPR 139
SG PR
Sbjct: 207 SGYTPPR 213
>gi|411119198|ref|ZP_11391578.1| RRM domain-containing RNA-binding protein [Oscillatoriales
cyanobacterium JSC-12]
gi|410711061|gb|EKQ68568.1| RRM domain-containing RNA-binding protein [Oscillatoriales
cyanobacterium JSC-12]
Length = 104
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 60/112 (53%), Gaps = 12/112 (10%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
+S+ V NL+++ T DDL F G+V + +P+DR T RGFAFV + + A+D
Sbjct: 1 MSVYVGNLSFKVTEDDLVETFSEYGKVVSVQLPKDRETGRMRGFAFVEMSSETEEAAAID 60
Query: 74 AMDGRMLDGRELRVQMARYGRPPSSSRS----RGGRDRDRRRDRSRSRDRRY 121
A+DG GR+L+V A +P RS GGRD RR DRRY
Sbjct: 61 ALDGAEWMGRDLKVNKA---KPREERRSPMGGGGGRDSFSRRG-----DRRY 104
>gi|301106558|ref|XP_002902362.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262098982|gb|EEY57034.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 373
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFER-CGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDAL 72
+SL V NL+ TT D+LRR F R G++ D+YIP++ + RGFAF+ F D R D
Sbjct: 111 ISLLVRNLSPDTTGDELRRAFSRRAGDILDVYIPKEYSSNRPRGFAFIEFADARVGRDVK 170
Query: 73 DAMDGRMLDGRELRVQMARYGR 94
MD L GRE+ V A+ R
Sbjct: 171 FEMDRTQLGGREIAVLFAKQHR 192
>gi|397642327|gb|EJK75167.1| hypothetical protein THAOC_03118, partial [Thalassiosira
oceanica]
Length = 452
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 44/78 (56%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
V L + NL Y T LR VF G V D+++P +R T RGF FV ++ AEDA+
Sbjct: 19 VKLYIGNLDYSTDEPQLRSVFGAFGAVTDVFLPMERGTSRPRGFGFVTLSTRQAAEDAIA 78
Query: 74 AMDGRMLDGRELRVQMAR 91
MD LDGR +RV +R
Sbjct: 79 KMDQSQLDGRTIRVNESR 96
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 53/91 (58%), Gaps = 5/91 (5%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
V L V NL++ T + +R +FE+ G V D ++P DR T RGFAFV ++AE A +
Sbjct: 128 VKLYVGNLSFDTNEEAVRSMFEQYGTVSDCFLPSDRDTGRPRGFAFVT-MPAKEAETACN 186
Query: 74 AMDGRMLDGRELRVQMARYGRPPSSSRSRGG 104
++G LDGR +RV A+ P S S GG
Sbjct: 187 KVNGMELDGRTVRVNEAQ----PKVSSSGGG 213
>gi|166367328|ref|YP_001659601.1| RNA-binding region protein [Microcystis aeruginosa NIES-843]
gi|425440525|ref|ZP_18820825.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9717]
gi|166089701|dbj|BAG04409.1| RNA-binding region protein [Microcystis aeruginosa NIES-843]
gi|389719028|emb|CCH97091.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9717]
Length = 100
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
+++ V NL Y T DDL+ VF G V +Y+P DR T + RGF FV + A++
Sbjct: 1 MTIYVGNLVYDVTTDDLKEVFAEYGTVSRVYLPVDRETGKMRGFGFVEMSSDEEEAKAIE 60
Query: 74 AMDGRMLDGRELRVQMARYGRPPSSSRSRGGR 105
+DG GR+++V A RP + GGR
Sbjct: 61 TLDGAEWMGRQMKVNKA---RPKEDNFGGGGR 89
>gi|119480671|ref|XP_001260364.1| small subunit of nuclear cap-binding protein complex [Neosartorya
fischeri NRRL 181]
gi|119408518|gb|EAW18467.1| small subunit of nuclear cap-binding protein complex [Neosartorya
fischeri NRRL 181]
Length = 196
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 59/114 (51%), Gaps = 12/114 (10%)
Query: 6 PPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDK 65
P +++ +L V NL++ TT + + +F +CGE+ + + DR+ + GF FV ++
Sbjct: 59 PVDKLKDATTLYVGNLSFYTTEEQIHELFSKCGEIKRLVMGLDRYNKTPCGFCFVEYYTH 118
Query: 66 RDAEDALDAMDGRMLDGRELRVQMA-------RYGRPPSSSRSRGGRDRDRRRD 112
+DA D L + G LD R +R + +YGR S GG+ RD R+
Sbjct: 119 QDALDCLKYIGGTKLDERIIRTDLDPGFEEGRQYGRGKS-----GGQVRDEYRE 167
>gi|425466927|ref|ZP_18846221.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9809]
gi|389830426|emb|CCI27637.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9809]
Length = 97
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
+S+ V NL+Y + +DL VF+ G+V ++IP DR T+ RGFAFV K A++
Sbjct: 1 MSIFVGNLSYEISQEDLVDVFKEYGQVQRVHIPVDRETQRKRGFAFVEMESKAQETAAIE 60
Query: 74 AMDGRMLDGRELRVQMARYGRPPSSSRSRGGRDRDRR 110
A+DG GR ++V AR R + + GG DR +R
Sbjct: 61 ALDGADWMGRSIKVNQARE-REERAPFNGGGGDRKKR 96
>gi|261351264|gb|ACX71299.1| RNA-binding protein RZ-1 [Capsicum annuum]
Length = 202
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 47/74 (63%)
Query: 18 VDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAMDG 77
+ NL++ T+ L+ FE+ G + D + D+F+ SRGF FV F DKR EDA++AM+G
Sbjct: 11 IGNLSWSTSDRGLKDAFEKFGNLVDAKVVLDKFSGRSRGFGFVTFDDKRAMEDAIEAMNG 70
Query: 78 RMLDGRELRVQMAR 91
LDGR + V A+
Sbjct: 71 MDLDGRAITVDKAQ 84
>gi|223647416|gb|ACN10466.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 193
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 47/75 (62%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L V L++ TT + L F + G + + + RD+ T SRGF FV++ + DA+DAL+ M
Sbjct: 7 LFVGGLSFDTTEESLAEAFAKYGNIAKVDVIRDKETGRSRGFGFVKYDNAEDAKDALEGM 66
Query: 76 DGRMLDGRELRVQMA 90
+G+ +DGR +RV A
Sbjct: 67 NGKSVDGRTIRVDEA 81
>gi|119492333|ref|XP_001263582.1| glycine-rich RNA-binding protein, putative [Neosartorya fischeri
NRRL 181]
gi|119411742|gb|EAW21685.1| glycine-rich RNA-binding protein, putative [Neosartorya fischeri
NRRL 181]
Length = 118
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 53/97 (54%), Gaps = 2/97 (2%)
Query: 13 MVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDAL 72
M L + L + TT D LR+ FE G V + + +DR T SRGF FVRF +A+ A+
Sbjct: 1 MSKLFIGGLAWHTTDDALRQGFEPYGVVEEAIVVKDRDTNRSRGFGFVRFSSDTEADAAM 60
Query: 73 DAMDGRMLDGRELRVQMA--RYGRPPSSSRSRGGRDR 107
DAM+ + DGR +RV A R R RGG ++
Sbjct: 61 DAMNNQEFDGRTIRVDKASERPARNNGGFHGRGGYNQ 97
>gi|62955567|ref|NP_001017797.1| cold inducible RNA binding protein [Danio rerio]
gi|62202782|gb|AAH93299.1| Zgc:112425 [Danio rerio]
gi|63100518|gb|AAH95030.1| Zgc:112425 [Danio rerio]
gi|182889498|gb|AAI65256.1| Zgc:112425 protein [Danio rerio]
Length = 185
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 47/75 (62%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L + L++ TT L F + G + ++++ R+R T SRGF FV F + DA+DAL+ M
Sbjct: 7 LFIGGLSFDTTEQSLEDAFSKYGVITNVHVARNRETNRSRGFGFVTFENPDDAKDALEGM 66
Query: 76 DGRMLDGRELRVQMA 90
+G+ +DGR +RV A
Sbjct: 67 NGKSVDGRTIRVDEA 81
>gi|297829568|ref|XP_002882666.1| hypothetical protein ARALYDRAFT_897216 [Arabidopsis lyrata subsp.
lyrata]
gi|297328506|gb|EFH58925.1| hypothetical protein ARALYDRAFT_897216 [Arabidopsis lyrata subsp.
lyrata]
Length = 257
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 47/76 (61%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
+L V NL + T D+ +F G+V + + +DR TR+SRG AFV + + DA A +
Sbjct: 58 TLYVSNLDFSLTNSDIHTLFSTFGKVARVTVLKDRHTRQSRGVAFVLYVSREDAAKAARS 117
Query: 75 MDGRMLDGRELRVQMA 90
MD ++L+GR+L V +A
Sbjct: 118 MDAKILNGRKLTVSIA 133
>gi|428773895|ref|YP_007165683.1| RNP-1 like RNA-binding protein [Cyanobacterium stanieri PCC 7202]
gi|428688174|gb|AFZ48034.1| RNP-1 like RNA-binding protein [Cyanobacterium stanieri PCC 7202]
Length = 90
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 47/78 (60%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
+S+ V NL+Y T +DL+ VF G+V +Y+P DR T+ RGF FV + E A++
Sbjct: 1 MSIYVGNLSYDVTEEDLQTVFSDYGQVKRVYLPVDRETKRMRGFGFVEMSSDSEEETAIE 60
Query: 74 AMDGRMLDGRELRVQMAR 91
+DG GR+++V A+
Sbjct: 61 TLDGAQWMGRQMKVNKAK 78
>gi|353235522|emb|CCA67534.1| related to glycine-rich RNA-binding protein [Piriformospora
indica DSM 11827]
Length = 236
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 46/75 (61%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
+ V NL++ TT D LR F + G V D + RDR T SRGF FV + + +A +A+ +
Sbjct: 5 IYVGNLSWNTTDDTLREAFRQYGNVVDSIVMRDRETGRSRGFGFVTYSSEEEASNAISGL 64
Query: 76 DGRMLDGRELRVQMA 90
+ LDGR+++V +A
Sbjct: 65 NETSLDGRQIKVNLA 79
>gi|196009125|ref|XP_002114428.1| expressed hypothetical protein [Trichoplax adhaerens]
gi|190583447|gb|EDV23518.1| expressed hypothetical protein [Trichoplax adhaerens]
Length = 247
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 52/92 (56%), Gaps = 5/92 (5%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
+ + NL ++ + F R G + D++I R GFAFV F D DA+DA++A+
Sbjct: 7 VYIGNLGSGAAKHEIEKEFARYGPLKDVWI-----ARNPPGFAFVVFDDPLDAQDAVEAL 61
Query: 76 DGRMLDGRELRVQMARYGRPPSSSRSRGGRDR 107
DGR L G +RV++AR PS RS G RDR
Sbjct: 62 DGRRLCGARVRVEIARGDSHPSVKRSTGHRDR 93
>gi|119485430|ref|ZP_01619758.1| RNA-binding region protein [Lyngbya sp. PCC 8106]
gi|119457186|gb|EAW38312.1| RNA-binding region protein [Lyngbya sp. PCC 8106]
Length = 100
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 51/92 (55%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
+S+ V NL+Y+ T +DLR VF G V + IP DR T RGFAFV + A++
Sbjct: 1 MSVYVGNLSYQVTEEDLRSVFAEYGTVKQVSIPTDRETGRPRGFAFVEMDADTQEQAAIE 60
Query: 74 AMDGRMLDGRELRVQMARYGRPPSSSRSRGGR 105
+DG GR+L+V AR SS +GGR
Sbjct: 61 KLDGAEWMGRDLKVNKARPREDRGSSFGQGGR 92
>gi|388579351|gb|EIM19676.1| translation initiation factor 3, RNA-binding subunit [Wallemia sebi
CBS 633.66]
Length = 288
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 49/77 (63%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
+L+V N++ T DDLR +F R G V ++I RDR TR S+GFAFV F + DAE AL+
Sbjct: 208 TLRVTNVSEDTHEDDLRELFRRFGRVQRVFIGRDRETRASKGFAFVSFELRSDAEKALEK 267
Query: 75 MDGRMLDGRELRVQMAR 91
++G D L VQ ++
Sbjct: 268 VNGMGYDNLILSVQWSQ 284
>gi|308272084|emb|CBX28692.1| Glycine-rich RNA-binding protein 8 [uncultured Desulfobacterium
sp.]
Length = 127
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 46/76 (60%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
+ V NL+Y DDLR+ FE+ G+V + I D+++ S+GF FV +A+ A++ +
Sbjct: 3 IYVGNLSYEVNEDDLRQAFEQLGKVDSVSIINDKYSGRSKGFGFVEMSSDAEAQAAIEGL 62
Query: 76 DGRMLDGRELRVQMAR 91
+G+ L GR + V AR
Sbjct: 63 NGKELKGRAINVNEAR 78
>gi|154279360|ref|XP_001540493.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150412436|gb|EDN07823.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 149
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 45/78 (57%)
Query: 13 MVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDAL 72
M L + L + TT D LR FE+ G + + + +DR T SRGF FVRF +A+ A+
Sbjct: 1 MSKLFIGGLAWHTTDDTLRAGFEKYGTIEEAIVVKDRDTNRSRGFGFVRFASDAEADAAM 60
Query: 73 DAMDGRMLDGRELRVQMA 90
+AM + DGR +RV A
Sbjct: 61 NAMSNQEFDGRVIRVDKA 78
>gi|449449074|ref|XP_004142290.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1-like [Cucumis sativus]
Length = 261
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
+L V N Y T DL +F G++ + + +DR TR+SRG AFV+F + DA A
Sbjct: 70 TLYVSNFDYSLTNSDLHTLFSNFGKIARVTVLKDRQTRKSRGVAFVQFISQDDAVKAAKQ 129
Query: 75 MDGRMLDGRELRVQMAR-YGRPPSSSRSRGGRDRDR 109
M G++L+GR L+ +A GR R R +D+ R
Sbjct: 130 MHGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSR 165
>gi|170076900|ref|YP_001733538.1| RNA-binding protein [Synechococcus sp. PCC 7002]
gi|169884569|gb|ACA98282.1| RNA-binding protein [Synechococcus sp. PCC 7002]
Length = 84
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 52/87 (59%), Gaps = 3/87 (3%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
+S+ V NL Y DDLR VF G+V +Y+P DR T+ RGF FV + + + A++
Sbjct: 1 MSIYVGNLDYAVEEDDLREVFNDYGKVKRVYLPVDRETQRKRGFGFVEMSNDEEEDKAIE 60
Query: 74 AMDGRMLDGRELRVQMARYGRPPSSSR 100
A+DG GR+++V A RP ++SR
Sbjct: 61 ALDGASWMGRDMKVNKA---RPRTNSR 84
>gi|108708313|gb|ABF96108.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
Length = 238
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 50/84 (59%), Gaps = 3/84 (3%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKR 66
PP G++ V N++ P+D+R FE+ G V D+Y+PR+ TRE RGF FV+F
Sbjct: 57 PPAPTGLL---VRNISLTARPEDIRIPFEQFGPVKDVYLPRNFHTRELRGFGFVKFRYPE 113
Query: 67 DAEDALDAMDGRMLDGRELRVQMA 90
DA A ++ +++ GRE+ + A
Sbjct: 114 DAAVAKQELNHQVIGGREISIVFA 137
>gi|326491331|dbj|BAK05765.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 262
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 58/96 (60%), Gaps = 4/96 (4%)
Query: 18 VDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAMDG 77
V NL++ TT + L+ F + G+V + + D+F+ SRGFAFV F +K+ E+A++ M+G
Sbjct: 47 VGNLSWSTTDESLKDAFSKYGKVTEAKVVMDKFSGRSRGFAFVTFDEKKAMEEAIEDMNG 106
Query: 78 RMLDGRELRVQMARYGRPPSSSRSRGGRDRDRRRDR 113
L+GR + V A +P R R G DRD RDR
Sbjct: 107 LDLEGRAITVDKA---QPQGVGRDRNG-DRDFDRDR 138
>gi|86608641|ref|YP_477403.1| RNA-binding protein [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86557183|gb|ABD02140.1| putative RNA-binding protein [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 94
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 54/93 (58%), Gaps = 5/93 (5%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
+++ V NL+++ + +DLR VF G V I +P DR T RGFAFV ++ D + A+D
Sbjct: 1 MTIFVGNLSFKASEEDLRLVFAEYGTVKQIKLPVDRETGRKRGFAFVELENEADEQKAID 60
Query: 74 AMDGRMLDGRELRVQMARYGRPPSSSRSRGGRD 106
+DG GR+LRV A P + S GGRD
Sbjct: 61 ELDGATWMGRDLRVNKA----LPRQT-SAGGRD 88
>gi|380018594|ref|XP_003693212.1| PREDICTED: probable RNA-binding protein 19-like [Apis florea]
Length = 900
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/74 (40%), Positives = 47/74 (63%)
Query: 18 VDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAMDG 77
+ NL+Y TT DD+R++FE+ G + ++ +P DR TR+S+GF + F A A +DG
Sbjct: 370 IRNLSYTTTEDDIRKLFEKYGPLTEVNLPIDRITRKSKGFGTITFLMTEHAVKAYSELDG 429
Query: 78 RMLDGRELRVQMAR 91
+LDGR L + A+
Sbjct: 430 SILDGRMLHLLPAK 443
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYI-----PRDRFTRESRGFAFVRFFDKRDAE 69
+L V N+ + TT + L+ F++CG + + I P++ + S G+ FVR+ K DA+
Sbjct: 678 TLFVKNINFSTTDEQLKSYFDKCGPLHYVSIATKKDPKNPGAKLSMGYGFVRYKRKADAD 737
Query: 70 DALDAMDGRMLDGRELRVQ 88
AL + +LDG+ L ++
Sbjct: 738 RALKVLQMTVLDGKTLELK 756
Score = 38.1 bits (87), Expect = 1.4, Method: Composition-based stats.
Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 2/90 (2%)
Query: 18 VDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRES-RGFAFVRFFDKRDAEDALDAM- 75
+ N+ ++ T +++ +F+ GE+ + +P+ E RGFAFV ++ K +A+ A A+
Sbjct: 785 IRNVPFQATAEEITELFKAFGELKAVRLPKKLVGVEKHRGFAFVEYYTKSEAKKAFKALC 844
Query: 76 DGRMLDGRELRVQMARYGRPPSSSRSRGGR 105
L GR L ++ A+ R R +
Sbjct: 845 QSTHLYGRRLVLEWAQTEEGVEDIRKRTAK 874
>gi|330843751|ref|XP_003293810.1| hypothetical protein DICPUDRAFT_84328 [Dictyostelium purpureum]
gi|325075834|gb|EGC29677.1| hypothetical protein DICPUDRAFT_84328 [Dictyostelium purpureum]
Length = 292
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 47/81 (58%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
+L V NL +T +DLR F + G++ + I D T+ESRGF FV F +A DA+
Sbjct: 69 TLHVSNLNPKTREEDLRDTFAQFGKIAECTILVDPNTKESRGFGFVTFLSSDEATDAISR 128
Query: 75 MDGRMLDGRELRVQMARYGRP 95
+D LDG +RV+ +R +P
Sbjct: 129 LDSSKLDGNVIRVEKSRRSKP 149
>gi|406831764|ref|ZP_11091358.1| RNP-1 like RNA-binding protein [Schlesneria paludicola DSM 18645]
Length = 122
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 44/76 (57%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L V NL+Y T L ++F + GEV I DR T S+GF FV D R AE A+ A+
Sbjct: 5 LYVGNLSYNATNQTLEQMFAQHGEVRSAQIVTDRDTGRSKGFGFVEMGDSRSAEAAISAL 64
Query: 76 DGRMLDGRELRVQMAR 91
+G+ +DGR L V AR
Sbjct: 65 NGQEVDGRALTVNEAR 80
>gi|326514928|dbj|BAJ99825.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326517426|dbj|BAK00080.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 153
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
+L V L+ RTT D LR F + GEV + DR T S+GF FVR+ DA ++
Sbjct: 49 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 108
Query: 75 MDGRMLDGRELRVQMARYGRP 95
MDG LDG V A Y RP
Sbjct: 109 MDGEFLDG---WVIFAEYARP 126
>gi|225562488|gb|EEH10767.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
gi|325092417|gb|EGC45727.1| conserved hypothetical protein [Ajellomyces capsulatus H88]
Length = 136
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 45/78 (57%)
Query: 13 MVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDAL 72
M L + L + TT D LR FE+ G + + + +DR T SRGF FVRF +A+ A+
Sbjct: 1 MSKLFIGGLAWHTTDDTLRAGFEKYGTIEEAIVVKDRDTNRSRGFGFVRFASDAEADAAM 60
Query: 73 DAMDGRMLDGRELRVQMA 90
+AM + DGR +RV A
Sbjct: 61 NAMSNQEFDGRVIRVDKA 78
>gi|425448845|ref|ZP_18828689.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 7941]
gi|389767706|emb|CCI06978.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 7941]
Length = 97
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 55/97 (56%), Gaps = 1/97 (1%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
+S+ V NL+Y + +DL VF+ GEV ++IP D+ T RGFAFV K A++
Sbjct: 1 MSIFVGNLSYEISQEDLVEVFKDYGEVQRVHIPVDKETGRKRGFAFVEMVSKGQETAAIE 60
Query: 74 AMDGRMLDGRELRVQMARYGRPPSSSRSRGGRDRDRR 110
A+DG GR ++V AR R + + GG DR +R
Sbjct: 61 ALDGADWMGRSIKVNQAR-DREERTPFNGGGGDRKKR 96
>gi|123473695|ref|XP_001320034.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121902831|gb|EAY07811.1| hypothetical protein TVAG_312100 [Trichomonas vaginalis G3]
Length = 215
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
VS+ + N+ + T L+ +F + GEV IP ++ R S+G+ FV F K DA+ A+D
Sbjct: 31 VSIHIGNIPFELTEPKLKEIFGKFGEVLSSKIPTNQANR-SKGYGFVSFALKEDAQKAID 89
Query: 74 AMDGRMLDGRELRVQMAR 91
+M+ LDGR++ V+ A+
Sbjct: 90 SMNNTELDGRKIEVEFAK 107
>gi|9843655|emb|CAC03601.1| SC35-like splicing factor SCL28, 28 kD [Arabidopsis thaliana]
Length = 236
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 52/94 (55%), Gaps = 1/94 (1%)
Query: 12 GMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDA 71
G L + NL P+DLR FER G + DIY+PR+ + E RGF FV++ DA +A
Sbjct: 45 GPSGLLIRNLPLDARPNDLRDSFERFGPLKDIYLPRNFNSGEPRGFGFVKYRYAEDAAEA 104
Query: 72 LDAMDGRMLDGRELRVQMARYGR-PPSSSRSRGG 104
+ M+ +++ GRE+ + A R P R+ G
Sbjct: 105 MKRMNHKVIGGREIAIVFAEENRKTPQEMRTTNG 138
>gi|47213059|emb|CAF93812.1| unnamed protein product [Tetraodon nigroviridis]
Length = 220
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 63/127 (49%), Gaps = 14/127 (11%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
S+ V N+ Y T ++L F CG V + I D++T +GFA++ F DK A+ A
Sbjct: 99 SIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKYTGHPKGFAYIEFADKESVRTAM-A 157
Query: 75 MDGRMLDGRELRVQMARYGRPPSSSRSRGGRDRDRRRDRSRSRDRRYTRSRSFSSRSR-- 132
+D + GR+++V R RP S+ DR R R +R SFSSR+R
Sbjct: 158 LDESLFRGRQIKVVAKRTNRPGIST-----------TDRGFPRARFRSRGGSFSSRARYY 206
Query: 133 SGSKSPR 139
SG PR
Sbjct: 207 SGYTPPR 213
>gi|410908757|ref|XP_003967857.1| PREDICTED: polyadenylate-binding protein 2-like isoform 2 [Takifugu
rubripes]
Length = 284
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 63/127 (49%), Gaps = 14/127 (11%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
S+ V N+ Y T ++L F CG V + I D++T +GFA++ F DK A+ A
Sbjct: 99 SIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKYTGHPKGFAYIEFADKESVRTAM-A 157
Query: 75 MDGRMLDGRELRVQMARYGRPPSSSRSRGGRDRDRRRDRSRSRDRRYTRSRSFSSRSR-- 132
+D + GR+++V R RP S+ DR R R +R SFSSR+R
Sbjct: 158 LDESLFRGRQIKVVAKRTNRPGIST-----------TDRGFPRARFRSRGGSFSSRARYY 206
Query: 133 SGSKSPR 139
SG PR
Sbjct: 207 SGYTPPR 213
>gi|407262829|ref|XP_003945671.1| PREDICTED: putative RNA-binding protein 3-like [Mus musculus]
Length = 154
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 65/134 (48%), Gaps = 17/134 (12%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L V L + T L F G + ++ + +DR T+ SRGF F+ F + A DA+ AM
Sbjct: 8 LFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRAM 67
Query: 76 DGRMLDGRELRVQMARYGRPP-----------SSSRSRGGRDRDRRRDRSRSR----DRR 120
+G LDGR++RV A G+ S SRGGRD+ R SR
Sbjct: 68 NGESLDGRQIRVDHA--GKSARGSRGGAFGGRGRSYSRGGRDQGYGSGRYDSRPGGYGYG 125
Query: 121 YTRSRSFSSRSRSG 134
Y RSR +S RS+ G
Sbjct: 126 YGRSRDYSGRSQGG 139
>gi|45382747|ref|NP_990009.1| transformer-2 protein homolog beta [Gallus gallus]
gi|224059830|ref|XP_002195659.1| PREDICTED: transformer-2 protein homolog beta isoform 1
[Taeniopygia guttata]
gi|11494371|gb|AAG35783.1|AF282244_1 transformer-2 beta [Gallus gallus]
Length = 289
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 48/82 (58%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
L V L+ TT DLR VF + G + D+ I D+ +R SRGFAFV F + DA++A +
Sbjct: 118 CCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVEDAKEAKE 177
Query: 74 AMDGRMLDGRELRVQMARYGRP 95
+G LDGR +RV + RP
Sbjct: 178 RANGMELDGRRIRVDFSITKRP 199
>gi|242040845|ref|XP_002467817.1| hypothetical protein SORBIDRAFT_01g034590 [Sorghum bicolor]
gi|241921671|gb|EER94815.1| hypothetical protein SORBIDRAFT_01g034590 [Sorghum bicolor]
Length = 190
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 46/75 (61%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L + N++ P+D+R FE+ G + D+Y+PR+ TRE RGF FV+F DA A M
Sbjct: 59 LLIRNISLTARPEDIRVPFEQFGPIKDVYLPRNFHTRELRGFGFVKFRYPEDAAVAKQEM 118
Query: 76 DGRMLDGRELRVQMA 90
+ +++ GRE+ + A
Sbjct: 119 NHQVIGGREISIVYA 133
>gi|148703339|gb|EDL35286.1| mCG1657 [Mus musculus]
Length = 288
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 48/82 (58%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
L V L+ TT DLR VF + G + D+ I D+ +R SRGFAFV F + DA++A +
Sbjct: 118 CCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKE 177
Query: 74 AMDGRMLDGRELRVQMARYGRP 95
+G LDGR +RV + RP
Sbjct: 178 RANGMELDGRRIRVDFSITKRP 199
>gi|344286334|ref|XP_003414914.1| PREDICTED: nuclear cap-binding protein subunit 2-like [Loxodonta
africana]
Length = 207
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 58/101 (57%), Gaps = 4/101 (3%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
+L V NL++ TT D + +F RCG++ ++++ D+ + + GF FV + + DAE+A+
Sbjct: 85 TLYVGNLSFYTTEDQIYELFGRCGDIKNVFMGLDKIKKTACGFCFVEYHTRADAENAMRF 144
Query: 75 MDGRMLDGRELRVQM---ARYGRPPSSSRSRGGRDRDRRRD 112
++G LD R +R R GR RS GG+ RD R+
Sbjct: 145 LNGTYLDDRIIRTDWDLGFREGRQYGRGRS-GGQVRDEFRE 184
>gi|300869358|ref|ZP_07113948.1| RNA-binding region RNP-1 [Oscillatoria sp. PCC 6506]
gi|300332657|emb|CBN59146.1| RNA-binding region RNP-1 [Oscillatoria sp. PCC 6506]
Length = 106
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 45/78 (57%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
+SL V NL+Y+ T +D+ VF G V +++P DR T RGF FV + E A+
Sbjct: 1 MSLYVGNLSYQVTQEDIITVFAEYGTVKRVHLPTDRETGRPRGFGFVEMATDAEEEAAIT 60
Query: 74 AMDGRMLDGRELRVQMAR 91
A+DG GREL+V A+
Sbjct: 61 ALDGAEWMGRELKVNKAK 78
>gi|296121725|ref|YP_003629503.1| RNP-1 like RNA-binding protein [Planctomyces limnophilus DSM
3776]
gi|296014065|gb|ADG67304.1| RNP-1 like RNA-binding protein [Planctomyces limnophilus DSM
3776]
Length = 104
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 44/76 (57%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L V NLTY L ++F GEV + DR T S+GF FV F D + A DA++AM
Sbjct: 5 LYVGNLTYDVNNSGLEQLFSSFGEVRSAQVVMDRETGRSKGFGFVEFGDSQSASDAINAM 64
Query: 76 DGRMLDGRELRVQMAR 91
+G+ ++GR L V AR
Sbjct: 65 NGKDVNGRALTVNEAR 80
>gi|119492303|ref|ZP_01623650.1| RNA-binding region protein [Lyngbya sp. PCC 8106]
gi|119453188|gb|EAW34355.1| RNA-binding region protein [Lyngbya sp. PCC 8106]
Length = 101
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 47/78 (60%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
+S+ V NL+Y T +DL+ VF G V + IP DR T RGFAFV ++ + A++
Sbjct: 1 MSIYVGNLSYEVTEEDLKSVFAEYGTVQRVSIPTDRETGRPRGFAFVEMQEESKEDAAIE 60
Query: 74 AMDGRMLDGRELRVQMAR 91
A+DG GR+L+V AR
Sbjct: 61 ALDGAEWMGRDLKVNKAR 78
>gi|9964085|gb|AAG09816.1|AF278702_1 cold-inducible RNA binding protein XCIRP-1 [Xenopus laevis]
Length = 166
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 47/75 (62%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L + L + T L + F + G + ++ + +DR T+ SRGF FV F + DA+DA+ AM
Sbjct: 7 LFIGGLNFETNEGCLEQAFTKYGRISEVVVVKDRETKRSRGFGFVTFENVDDAKDAMMAM 66
Query: 76 DGRMLDGRELRVQMA 90
+G+ +DGR++RV A
Sbjct: 67 NGKSVDGRQIRVDQA 81
>gi|225461185|ref|XP_002283144.1| PREDICTED: glycine-rich RNA-binding protein 2 [Vitis vinifera]
gi|147854770|emb|CAN78606.1| hypothetical protein VITISV_024164 [Vitis vinifera]
gi|302143178|emb|CBI20473.3| unnamed protein product [Vitis vinifera]
Length = 135
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 1/93 (1%)
Query: 11 EGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAED 70
E +L V L+ RTT + L F + G+V + + DR + S+GF FVR+ DA +
Sbjct: 38 EPSTNLFVSGLSKRTTSEGLHEAFSKFGQVVNARVVTDRVSGYSKGFGFVRYVSLEDAAE 97
Query: 71 ALDAMDGRMLDGRELRVQMARYGRPPSSSRSRG 103
+ MDG+ LDG + + AR RPP S ++ G
Sbjct: 98 GIKGMDGKFLDGWVIFAEYAR-PRPPPSPQNNG 129
>gi|126325323|ref|XP_001367196.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like 1-like
[Monodelphis domestica]
Length = 388
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 46/75 (61%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L V L T L VF + G + ++ + +DR TR+SRGFAF+ F DA+DA M
Sbjct: 10 LFVGGLNIETNEKALEAVFGKYGRIVEVLLMKDRETRKSRGFAFITFESPADAKDAARDM 69
Query: 76 DGRMLDGRELRVQMA 90
+G++LDG+ ++V+ A
Sbjct: 70 NGKLLDGKSIKVEQA 84
>gi|388583201|gb|EIM23503.1| hypothetical protein WALSEDRAFT_67167 [Wallemia sebi CBS 633.66]
Length = 89
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 46/76 (60%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
+ + NL++ T +DL R F G++ D + +DR T SRGF FV + + R+A AL++M
Sbjct: 7 IYISNLSWSTNDEDLARAFSPFGQISDYIVMKDRQTGRSRGFGFVTYANDREASSALESM 66
Query: 76 DGRMLDGRELRVQMAR 91
+ LDGR +RV A
Sbjct: 67 NEVELDGRRIRVNYAH 82
>gi|327405345|ref|YP_004346183.1| RNP-1 like RNA-binding protein [Fluviicola taffensis DSM 16823]
gi|327320853|gb|AEA45345.1| RNP-1 like RNA-binding protein [Fluviicola taffensis DSM 16823]
Length = 224
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 55/95 (57%), Gaps = 3/95 (3%)
Query: 13 MVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDAL 72
M S+ V L + TT + L+ +FE G+V + I +DR T + RGFAFV D+ +A+ A+
Sbjct: 1 MTSIFVAKLDFNTTEEQLKSLFEDYGKVNRVTIAKDRETGKPRGFAFVEMADESEADKAI 60
Query: 73 DAMDGRMLDGRELRVQMA---RYGRPPSSSRSRGG 104
+A+D ++GR + V+ A G PS +R G
Sbjct: 61 EALDDSSVNGRNIAVKKADDRASGGKPSGDNNRSG 95
>gi|409044525|gb|EKM54006.1| hypothetical protein PHACADRAFT_257571 [Phanerochaete carnosa
HHB-10118-sp]
Length = 155
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 47/75 (62%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
+ V NL++ TT D LR F + G++ D + RDR T SRGF FV F +A+ A+ ++
Sbjct: 5 VYVGNLSWNTTDDSLRTAFSQFGQILDSIVMRDRDTGRSRGFGFVTFSSANEAQTAITSL 64
Query: 76 DGRMLDGRELRVQMA 90
+ + LDGR +RV +A
Sbjct: 65 NEQELDGRRIRVNLA 79
>gi|440295453|gb|ELP88366.1| multiple RNA-binding domain containing protein, putative [Entamoeba
invadens IP1]
Length = 685
Score = 63.2 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/105 (28%), Positives = 61/105 (58%), Gaps = 3/105 (2%)
Query: 18 VDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAMDG 77
V+NL Y + D+R FE+ GE+ ++++P D+ + +++GFAFV + +DA A + MDG
Sbjct: 217 VNNLPYACSEQDVREAFEKFGEITEVHLPIDKVSGKTKGFAFVMYVVPQDAVKAFNEMDG 276
Query: 78 RMLDGRELRVQMAR---YGRPPSSSRSRGGRDRDRRRDRSRSRDR 119
+++ GR + V A+ Y + ++ +D+ + R+ ++
Sbjct: 277 QVIKGRIIHVNYAKADPYAQTTEEKEAKTYKDKKANELKKRASNQ 321
Score = 39.3 bits (90), Expect = 0.48, Method: Composition-based stats.
Identities = 20/76 (26%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
+L + N+ +TT D LR+VF + G++ + I ++ T F F+ F A +A+
Sbjct: 508 TLYIKNVNPKTTEDTLRKVFTQYGQIHSVSISKNP-TSSKNVFCFLEFARHSSALNAMKN 566
Query: 75 MDGRMLDGRELRVQMA 90
G+++DG + ++++
Sbjct: 567 AQGQLVDGNAIAIELS 582
>gi|425448844|ref|ZP_18828688.1| putative RNA-binding protein rbpE [Microcystis aeruginosa PCC 7941]
gi|389767705|emb|CCI06977.1| putative RNA-binding protein rbpE [Microcystis aeruginosa PCC 7941]
Length = 97
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 55/97 (56%), Gaps = 1/97 (1%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
+S+ V NL+Y + DDL VF+ G V ++IP D+ T RGFAFV +K A++
Sbjct: 1 MSIFVGNLSYDISQDDLVEVFKEYGNVQRVHIPVDKETGRKRGFAFVEMENKAQETTAIE 60
Query: 74 AMDGRMLDGRELRVQMARYGRPPSSSRSRGGRDRDRR 110
A+DG GR ++V AR R + + GG DR +R
Sbjct: 61 ALDGAEWMGRSIKVNEAR-DREERAPFNGGGGDRKKR 96
>gi|292490317|ref|YP_003525756.1| RNP-1 like RNA-binding protein [Nitrosococcus halophilus Nc4]
gi|291578912|gb|ADE13369.1| RNP-1 like RNA-binding protein [Nitrosococcus halophilus Nc4]
Length = 97
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 54/97 (55%), Gaps = 1/97 (1%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
+++ V NL+Y+ T ++LR FE GEV + D+F+ S+GF FV + DAE A+
Sbjct: 1 MNIYVGNLSYQVTDEELRAAFENYGEVSSAKVIVDKFSNRSKGFGFVEMARQEDAETAIK 60
Query: 74 AMDGRMLDGRELRVQMARYGRPPSSSRSRGGRDRDRR 110
M+ L GR++ V AR R RS G DR RR
Sbjct: 61 EMNDSDLKGRQIVVNQAR-PRNEGFRRSEGFGDRQRR 96
>gi|323450994|gb|EGB06873.1| hypothetical protein AURANDRAFT_9018, partial [Aureococcus
anophagefferens]
Length = 91
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 49/75 (65%), Gaps = 6/75 (8%)
Query: 29 DLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAMDGRMLDGRELRVQ 88
+LR VF + GE+ D+++P DR T RGFAF+ + D RD +DAL AM+GR+ GR LRV
Sbjct: 5 ELRDVFGKYGEIKDVHLPTDRETGRLRGFAFLSYNDTRDCDDALAAMNGRV-GGRTLRVS 63
Query: 89 MAR-----YGRPPSS 98
A+ GRPP +
Sbjct: 64 KAQPRGSGAGRPPPN 78
>gi|255944269|ref|XP_002562902.1| Pc20g03510 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211587637|emb|CAP85680.1| Pc20g03510 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 151
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 53/89 (59%), Gaps = 4/89 (4%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
+ L++ T+ D LR F++ GE+ + + +DR T+ SRGF FVRF +A+ AL AM
Sbjct: 1 MDFSGLSWHTSDDTLREGFQQFGEIQEAIVVKDRATQRSRGFGFVRFATDAEADAALGAM 60
Query: 76 DGRMLDGRELRVQMARYGRPPSSSRSRGG 104
+ + DGR +RV A + RP RS GG
Sbjct: 61 NNQEFDGRVIRVDKA-FDRP---QRSEGG 85
>gi|195995613|ref|XP_002107675.1| expressed hypothetical protein [Trichoplax adhaerens]
gi|190588451|gb|EDV28473.1| expressed hypothetical protein [Trichoplax adhaerens]
Length = 330
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 7/79 (8%)
Query: 12 GMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDA 71
G +S +VDN LR F++ G + + ++ DR + SRGF FV F+D DA+DA
Sbjct: 19 GGLSSEVDNTK-------LREAFQQYGRLREAFVTVDRMSGRSRGFGFVSFYDPEDAQDA 71
Query: 72 LDAMDGRMLDGRELRVQMA 90
+D M G+ L GR +RV A
Sbjct: 72 IDQMTGKELCGRSIRVSHA 90
>gi|3342756|gb|AAC41383.1| RNA-binding protein AxRNBP [Ambystoma mexicanum]
Length = 144
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 46/75 (61%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L V L++ + L F + G+V D + +DR T SRGF FV F + DA++AL AM
Sbjct: 9 LFVGGLSFDSNEHSLESAFSKYGDVCDAVVVKDRETGRSRGFGFVTFRNPSDAKEALHAM 68
Query: 76 DGRMLDGRELRVQMA 90
+G LDGR++RV +A
Sbjct: 69 NGESLDGRQIRVDLA 83
>gi|45544646|ref|NP_956311.1| cold inducible RNA binding protein isoform 2 [Danio rerio]
gi|28856196|gb|AAH48027.1| Cold inducible RNA binding protein [Danio rerio]
gi|182891172|gb|AAI64022.1| Cirbp protein [Danio rerio]
Length = 184
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 45/75 (60%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L + L+Y TT L F + G + + + RDR T SRGF FV F + DA+DA+ AM
Sbjct: 7 LFIGGLSYDTTEQSLEEAFSKYGTIAKVDVIRDRETDRSRGFGFVTFENPEDAKDAMAAM 66
Query: 76 DGRMLDGRELRVQMA 90
+G+ +DGR +RV A
Sbjct: 67 NGKQVDGRMIRVDEA 81
>gi|186682695|ref|YP_001865891.1| RNP-1 like RNA-binding protein [Nostoc punctiforme PCC 73102]
gi|186465147|gb|ACC80948.1| RNP-1 like RNA-binding protein [Nostoc punctiforme PCC 73102]
Length = 104
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 46/78 (58%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
+S+ V NL+Y+ T +DL++ F G V + +P DR T RGFAFV + A+D
Sbjct: 1 MSIYVGNLSYQVTEEDLKQAFAEYGTVSRVQLPTDRETGRPRGFAFVEMESDTQEQAAID 60
Query: 74 AMDGRMLDGRELRVQMAR 91
A+DG GR+L+V A+
Sbjct: 61 ALDGAEWMGRDLKVNKAK 78
>gi|425434850|ref|ZP_18815314.1| putative RNA-binding protein rbpA [Microcystis aeruginosa PCC 9432]
gi|389675574|emb|CCH95321.1| putative RNA-binding protein rbpA [Microcystis aeruginosa PCC 9432]
Length = 97
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
+S+ V NL+Y + DDL VF+ G+V ++IP D+ T RGFAFV +K A++
Sbjct: 1 MSIFVGNLSYEISQDDLVEVFQDYGKVQRVHIPVDKETGRKRGFAFVEMENKAQEAKAIE 60
Query: 74 AMDGRMLDGRELRVQMARYGRPPSSSRSRGGRDRDRR 110
A+DG GR ++V AR R + + GG DR +R
Sbjct: 61 ALDGADWMGRSIKVNEAR-DREERAPFNGGGGDRKKR 96
>gi|19113206|ref|NP_596414.1| nuclear cap-binding complex small subunit (predicted)
[Schizosaccharomyces pombe 972h-]
gi|74698255|sp|Q9P383.1|NCBP2_SCHPO RecName: Full=Nuclear cap-binding protein subunit 2; AltName:
Full=20 kDa nuclear cap-binding protein; AltName:
Full=NCBP 20 kDa subunit; Short=CBP20
gi|9453827|emb|CAB99394.1| nuclear cap-binding complex small subunit (predicted)
[Schizosaccharomyces pombe]
Length = 182
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 67/130 (51%), Gaps = 18/130 (13%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
+ V NL++ TT + + +F +CGE+ I + DRFT+ GF FV +F+ +DA D+L
Sbjct: 33 CVYVGNLSFYTTEEQIYALFSKCGEIRRIIMGVDRFTKTPCGFCFVEYFENQDALDSLKY 92
Query: 75 MDGRMLDGRELRVQMA-------RYGRPPSSSRSRGGRDRDRRRDR------SRSRDRRY 121
+ LD R +R + +YGR S GG+ RD R+ +++R+
Sbjct: 93 ISRTSLDERIIRADLDHGYEEGRQYGRGAS-----GGQVRDEMREEFDPGRGGYAKNRQP 147
Query: 122 TRSRSFSSRS 131
T SR ++ S
Sbjct: 148 TSSRQLANYS 157
>gi|194374387|dbj|BAG57089.1| unnamed protein product [Homo sapiens]
Length = 168
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 63/121 (52%), Gaps = 7/121 (5%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
S+ V N+ Y T ++L F CG V + I D+F+ +GFA++ F DK +L A
Sbjct: 45 SIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSL-A 103
Query: 75 MDGRMLDGRELRVQMARYGRPPSSSRSRG---GRDRDRRRDRSRSRDRRYTRSRSFSSRS 131
+D + GR+++V R RP S+ RG R R R + + SR R Y+ F+SR
Sbjct: 104 LDESLFRGRQIKVIPKRTNRPGISTTDRGFPRARYRARTTNYNSSRSRFYS---GFNSRP 160
Query: 132 R 132
R
Sbjct: 161 R 161
>gi|374314656|ref|YP_005061084.1| RRM domain-containing RNA-binding protein [Sphaerochaeta
pleomorpha str. Grapes]
gi|359350300|gb|AEV28074.1| RRM domain-containing RNA-binding protein [Sphaerochaeta
pleomorpha str. Grapes]
Length = 92
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 44/75 (58%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
+ V N++Y TT DDLR +F + G V I DR TR +GF FV + A+ A+ +
Sbjct: 5 IYVGNMSYNTTEDDLRELFSQYGNVLSATIIMDRETRRPKGFGFVEMEENSAADAAISQL 64
Query: 76 DGRMLDGRELRVQMA 90
DG+ +DGR LRV A
Sbjct: 65 DGKEIDGRNLRVNEA 79
>gi|126717485|gb|AAI33469.1| PABPN1 protein [Bos taurus]
Length = 296
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 63/121 (52%), Gaps = 7/121 (5%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
S+ V N+ Y T ++L F CG V + I D+F+ +GFA++ F DK +L A
Sbjct: 173 SIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSL-A 231
Query: 75 MDGRMLDGRELRVQMARYGRPPSSSRSRG---GRDRDRRRDRSRSRDRRYTRSRSFSSRS 131
+D + GR+++V R RP S+ RG R R R + + SR R Y+ F+SR
Sbjct: 232 LDESLFRGRQIKVIPKRTNRPGISTTDRGFPRARYRARTTNYNSSRSRFYS---GFNSRP 288
Query: 132 R 132
R
Sbjct: 289 R 289
>gi|406896127|gb|EKD40506.1| RNP-1 like protein RNA-binding protein, partial [uncultured
bacterium]
Length = 92
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 48/75 (64%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L V NL+Y + DL+++FE G+VG I D+++ +S+GF FV + +A+ A++A+
Sbjct: 3 LYVGNLSYEISESDLKQMFEEFGKVGSASIIMDKYSGQSKGFGFVEMDSQTEAQSAMEAL 62
Query: 76 DGRMLDGRELRVQMA 90
+G+ + GR L V A
Sbjct: 63 NGKDVKGRTLIVNEA 77
>gi|320162535|ref|YP_004175760.1| RNA-binding domain-containing protein [Anaerolinea thermophila
UNI-1]
gi|319996389|dbj|BAJ65160.1| RNA-binding region [Anaerolinea thermophila UNI-1]
Length = 105
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 46/78 (58%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
+++ V NL + DDLR F G V + +D+F+ +SRGF FV ++ +AE A+
Sbjct: 1 MNIYVGNLPFSANEDDLRSAFAAYGTVTSAAVIKDQFSGQSRGFGFVEMPNQAEAEAAIQ 60
Query: 74 AMDGRMLDGRELRVQMAR 91
++G+ L GR LRV AR
Sbjct: 61 GLNGKELKGRALRVNEAR 78
>gi|218438646|ref|YP_002376975.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7424]
gi|218171374|gb|ACK70107.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7424]
Length = 105
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
+++ V NL Y T D+LR VF G V +Y+P DR T RGF FV + + A++
Sbjct: 1 MAIYVGNLYYEVTQDELREVFAEYGTVSRVYLPVDRETGRMRGFGFVEMSTDAEEDTAIE 60
Query: 74 AMDGRMLDGRELRVQMARYGRPPSSSRSRGG 104
+DG GR+L+V AR R ++R GG
Sbjct: 61 TLDGAEWMGRQLKVNKAR-PRENDNNRGSGG 90
>gi|126010727|gb|AAI33552.1| PABPN1 protein [Bos taurus]
Length = 275
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 63/121 (52%), Gaps = 7/121 (5%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
S+ V N+ Y T ++L F CG V + I D+F+ +GFA++ F DK +L A
Sbjct: 142 SIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSL-A 200
Query: 75 MDGRMLDGRELRVQMARYGRPPSSSRSRG---GRDRDRRRDRSRSRDRRYTRSRSFSSRS 131
+D + GR+++V R RP S+ RG R R R + + SR R Y+ F+SR
Sbjct: 201 LDESLFRGRQIKVIPKRTNRPGISTTDRGFPRARYRARTTNYNSSRSRFYS---GFNSRP 257
Query: 132 R 132
R
Sbjct: 258 R 258
>gi|301792821|ref|XP_002931377.1| PREDICTED: polyadenylate-binding protein 2-like [Ailuropoda
melanoleuca]
Length = 178
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 63/121 (52%), Gaps = 7/121 (5%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
S+ V N+ Y T ++L F CG V + I D+F+ +GFA++ F DK +L A
Sbjct: 45 SIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSL-A 103
Query: 75 MDGRMLDGRELRVQMARYGRPPSSSRSRG---GRDRDRRRDRSRSRDRRYTRSRSFSSRS 131
+D + GR+++V R RP S+ RG R R R + + SR R Y+ F+SR
Sbjct: 104 LDESLFRGRQIKVIPKRTNRPGISTTDRGFPRARYRARTTNYNSSRSRFYS---GFNSRP 160
Query: 132 R 132
R
Sbjct: 161 R 161
>gi|27807029|ref|NP_776994.1| polyadenylate-binding protein 2 [Bos taurus]
gi|46396285|sp|Q28165.3|PABP2_BOVIN RecName: Full=Polyadenylate-binding protein 2; Short=PABP-2;
Short=Poly(A)-binding protein 2; AltName: Full=Nuclear
poly(A)-binding protein 1; AltName: Full=Poly(A)-binding
protein II; Short=PABII; AltName:
Full=Polyadenylate-binding nuclear protein 1
gi|1051125|emb|CAA62006.1| polyA binding protein II [Bos taurus]
gi|126920947|gb|AAI33559.1| Poly(A) binding protein, nuclear 1 [Bos taurus]
gi|296483592|tpg|DAA25707.1| TPA: polyadenylate-binding protein 2 [Bos taurus]
Length = 306
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 63/121 (52%), Gaps = 7/121 (5%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
S+ V N+ Y T ++L F CG V + I D+F+ +GFA++ F DK +L A
Sbjct: 173 SIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSL-A 231
Query: 75 MDGRMLDGRELRVQMARYGRPPSSSRSRG---GRDRDRRRDRSRSRDRRYTRSRSFSSRS 131
+D + GR+++V R RP S+ RG R R R + + SR R Y+ F+SR
Sbjct: 232 LDESLFRGRQIKVIPKRTNRPGISTTDRGFPRARYRARTTNYNSSRSRFYS---GFNSRP 288
Query: 132 R 132
R
Sbjct: 289 R 289
>gi|9506945|ref|NP_062275.1| polyadenylate-binding protein 2 [Mus musculus]
gi|46396417|sp|Q8CCS6.3|PABP2_MOUSE RecName: Full=Polyadenylate-binding protein 2; Short=PABP-2;
Short=Poly(A)-binding protein 2; AltName: Full=Nuclear
poly(A)-binding protein 1; AltName: Full=Poly(A)-binding
protein II; Short=PABII; AltName:
Full=Polyadenylate-binding nuclear protein 1
gi|2351846|gb|AAC00210.1| poly(A) binding protein II [Mus musculus]
gi|33585929|gb|AAH55866.1| Poly(A) binding protein, nuclear 1 [Mus musculus]
gi|148704376|gb|EDL36323.1| poly(A) binding protein, nuclear 1, isoform CRA_b [Mus musculus]
Length = 302
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 62/123 (50%), Gaps = 11/123 (8%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
S+ V N+ Y T ++L F CG V + I D+F+ +GFA++ F DK +L A
Sbjct: 169 SIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSL-A 227
Query: 75 MDGRMLDGRELRVQMARYGRPPSSSRSRGGRDRDRRRDRSRSRDRRYTRSRS-----FSS 129
+D + GR+++V R RP S+ DR R R R+R Y SRS F+S
Sbjct: 228 LDESLFRGRQIKVIPKRTNRPGIST-----TDRGFPRSRYRARTTNYNSSRSRFYSGFNS 282
Query: 130 RSR 132
R R
Sbjct: 283 RPR 285
>gi|22299798|ref|NP_683045.1| RNA-binding protein [Thermosynechococcus elongatus BP-1]
gi|22295982|dbj|BAC09807.1| RNA-binding protein [Thermosynechococcus elongatus BP-1]
Length = 94
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 43/78 (55%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
+S+ V NL+Y T +DL VF G V +Y+P DR T RGF FV + E A+
Sbjct: 1 MSIYVGNLSYTATQEDLEAVFAEYGSVKQVYLPVDRETGRKRGFGFVEMSSDAEEEAAIA 60
Query: 74 AMDGRMLDGRELRVQMAR 91
+DG GR+L+V AR
Sbjct: 61 DLDGAEWMGRQLKVNKAR 78
>gi|383767221|ref|YP_005446202.1| RNA-binding protein [Phycisphaera mikurensis NBRC 102666]
gi|381387489|dbj|BAM04305.1| RNA-binding protein [Phycisphaera mikurensis NBRC 102666]
Length = 112
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
+ V NL +RTT +DL +F G V D + DR T SRGF FV D+ DA+ A+DA+
Sbjct: 3 MYVGNLAWRTTTEDLEALFSNYGSVSDAIVLTDRETGRSRGFGFVTMGDE-DAKKAIDAL 61
Query: 76 DGRMLDGRELRVQMAR 91
DG +GR LRV A+
Sbjct: 62 DGSDFEGRPLRVNEAQ 77
>gi|326925689|ref|XP_003209043.1| PREDICTED: transformer-2 protein homolog beta-like [Meleagris
gallopavo]
Length = 302
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 48/82 (58%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
L V L+ TT DLR VF + G + D+ I D+ +R SRGFAFV F + DA++A +
Sbjct: 131 CCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVEDAKEAKE 190
Query: 74 AMDGRMLDGRELRVQMARYGRP 95
+G LDGR +RV + RP
Sbjct: 191 RANGMELDGRRIRVDFSITKRP 212
>gi|440893202|gb|ELR46056.1| Polyadenylate-binding protein 2, partial [Bos grunniens mutus]
Length = 189
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 63/121 (52%), Gaps = 7/121 (5%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
S+ V N+ Y T ++L F CG V + I D+F+ +GFA++ F DK +L A
Sbjct: 56 SIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSL-A 114
Query: 75 MDGRMLDGRELRVQMARYGRPPSSSRSRG---GRDRDRRRDRSRSRDRRYTRSRSFSSRS 131
+D + GR+++V R RP S+ RG R R R + + SR R Y+ F+SR
Sbjct: 115 LDESLFRGRQIKVIPKRTNRPGISTTDRGFPRARYRARTTNYNSSRSRFYS---GFNSRP 171
Query: 132 R 132
R
Sbjct: 172 R 172
>gi|149063930|gb|EDM14200.1| poly(A) binding protein, nuclear 1, isoform CRA_b [Rattus
norvegicus]
Length = 184
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 63/121 (52%), Gaps = 7/121 (5%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
S+ V N+ Y T ++L F CG V + I D+F+ +GFA++ F DK +L A
Sbjct: 61 SIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSL-A 119
Query: 75 MDGRMLDGRELRVQMARYGRPPSSSRSRG---GRDRDRRRDRSRSRDRRYTRSRSFSSRS 131
+D + GR+++V R RP S+ RG R R R + + SR R Y+ F+SR
Sbjct: 120 LDESLFRGRQIKVIPKRTNRPGISTTDRGFPRARYRARTTNYNSSRSRFYS---GFNSRP 176
Query: 132 R 132
R
Sbjct: 177 R 177
>gi|428313300|ref|YP_007124277.1| RRM domain-containing RNA-binding protein [Microcoleus sp. PCC
7113]
gi|428254912|gb|AFZ20871.1| RRM domain-containing RNA-binding protein [Microcoleus sp. PCC
7113]
Length = 97
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 51/91 (56%), Gaps = 3/91 (3%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
+++ V NL+Y+ T +DLR VF G V + +P DR T RGFAFV ++ + A+
Sbjct: 1 MTIYVGNLSYQATEEDLRTVFADYGTVKRVVLPTDRETGRMRGFAFVEMTEETQEDSAIS 60
Query: 74 AMDGRMLDGRELRVQMARYGRPPSSSRSRGG 104
+DG GR+LRV A RP +RS G
Sbjct: 61 ELDGAEWMGRQLRVNKA---RPKEDNRSSEG 88
>gi|201860272|ref|NP_001128480.1| polyadenylate-binding protein 2 [Rattus norvegicus]
gi|149063929|gb|EDM14199.1| poly(A) binding protein, nuclear 1, isoform CRA_a [Rattus
norvegicus]
Length = 302
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 63/121 (52%), Gaps = 7/121 (5%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
S+ V N+ Y T ++L F CG V + I D+F+ +GFA++ F DK +L A
Sbjct: 169 SIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSL-A 227
Query: 75 MDGRMLDGRELRVQMARYGRPPSSSRSRG---GRDRDRRRDRSRSRDRRYTRSRSFSSRS 131
+D + GR+++V R RP S+ RG R R R + + SR R Y+ F+SR
Sbjct: 228 LDESLFRGRQIKVIPKRTNRPGISTTDRGFPRARYRARTTNYNSSRSRFYS---GFNSRP 284
Query: 132 R 132
R
Sbjct: 285 R 285
>gi|297694743|ref|XP_002824624.1| PREDICTED: polyadenylate-binding protein 2 isoform 1 [Pongo abelii]
Length = 296
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 63/121 (52%), Gaps = 7/121 (5%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
S+ V N+ Y T ++L F CG V + I D+F+ +GFA++ F DK +L A
Sbjct: 173 SIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSL-A 231
Query: 75 MDGRMLDGRELRVQMARYGRPPSSSRSRG---GRDRDRRRDRSRSRDRRYTRSRSFSSRS 131
+D + GR+++V R RP S+ RG R R R + + SR R Y+ F+SR
Sbjct: 232 LDESLFRGRQIKVIPKRTNRPGISTTDRGFPRARYRARTTNYNSSRSRFYS---GFNSRP 288
Query: 132 R 132
R
Sbjct: 289 R 289
>gi|167382576|ref|XP_001736171.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165901525|gb|EDR27604.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 697
Score = 63.2 bits (152), Expect = 4e-08, Method: Composition-based stats.
Identities = 32/86 (37%), Positives = 52/86 (60%), Gaps = 2/86 (2%)
Query: 18 VDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAMDG 77
+ NL + T DD+R+ F+R G + +I++P D+ T++S+GF FV F +DA A + MD
Sbjct: 190 ITNLPFNCTEDDIRKEFDRFGNIAEIHLPIDKITKKSKGFGFVLFVVPQDAVKACNEMDN 249
Query: 78 RMLDGRELRVQMARYGRPPSSSRSRG 103
+ + GR + V A+ P SS+ G
Sbjct: 250 KFIKGRIVHVTYAK--ADPYSSQQTG 273
Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 53/83 (63%), Gaps = 2/83 (2%)
Query: 11 EGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIP--RDRFTRESRGFAFVRFFDKRDA 68
EG +L + NL+++T D +R+VFE+CG V + + +D+ ++ GF FV + DA
Sbjct: 513 EGSKTLYIKNLSFKTKEDVIRKVFEKCGRVLAVTLSKTKDKKVEKNSGFGFVEYARHEDA 572
Query: 69 EDALDAMDGRMLDGRELRVQMAR 91
+A+ + G+++DG +++++++
Sbjct: 573 INAIKTLQGKVIDGHAVQIEISQ 595
Score = 39.7 bits (91), Expect = 0.41, Method: Composition-based stats.
Identities = 21/76 (27%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L V N+ + T ++R +F G + + +P+ + +++GFAFV + K++A +A+ A+
Sbjct: 618 LLVKNVPFETNIKEVRELFRTYGTLRGVRLPK-KVDGQNKGFAFVEYATKQEAANAMAAL 676
Query: 76 DGRMLDGRELRVQMAR 91
GR L ++ A+
Sbjct: 677 KNSHFYGRHLIIEYAK 692
>gi|26328001|dbj|BAC27741.1| unnamed protein product [Mus musculus]
Length = 292
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 62/123 (50%), Gaps = 11/123 (8%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
S+ V N+ Y T ++L F CG V + I D+F+ +GFA++ F DK +L A
Sbjct: 169 SIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSL-A 227
Query: 75 MDGRMLDGRELRVQMARYGRPPSSSRSRGGRDRDRRRDRSRSRDRRYTRSRS-----FSS 129
+D + GR+++V R RP S+ DR R R R+R Y SRS F+S
Sbjct: 228 LDESLFRGRQIKVIPKRTNRPGIST-----TDRGFPRSRYRARTTNYNSSRSRFYSGFNS 282
Query: 130 RSR 132
R R
Sbjct: 283 RPR 285
>gi|4758876|ref|NP_004634.1| polyadenylate-binding protein 2 [Homo sapiens]
gi|343780920|ref|NP_001230477.1| polyadenylate-binding protein 2 [Sus scrofa]
gi|360039231|ref|NP_001123909.2| polyadenylate-binding protein 2 [Canis lupus familiaris]
gi|114652132|ref|XP_001162168.1| PREDICTED: polyadenylate-binding protein 2 isoform 1 [Pan
troglodytes]
gi|296214561|ref|XP_002753680.1| PREDICTED: polyadenylate-binding protein 2 isoform 2 [Callithrix
jacchus]
gi|395859297|ref|XP_003801976.1| PREDICTED: polyadenylate-binding protein 2 [Otolemur garnettii]
gi|402875708|ref|XP_003901638.1| PREDICTED: polyadenylate-binding protein 2 [Papio anubis]
gi|426376431|ref|XP_004055004.1| PREDICTED: polyadenylate-binding protein 2 [Gorilla gorilla
gorilla]
gi|46403176|sp|Q86U42.3|PABP2_HUMAN RecName: Full=Polyadenylate-binding protein 2; Short=PABP-2;
Short=Poly(A)-binding protein 2; AltName: Full=Nuclear
poly(A)-binding protein 1; AltName: Full=Poly(A)-binding
protein II; Short=PABII; AltName:
Full=Polyadenylate-binding nuclear protein 1
gi|2895276|gb|AAC39596.1| poly(A) binding protein II [Homo sapiens]
gi|15012075|gb|AAH10939.1| Poly(A) binding protein, nuclear 1 [Homo sapiens]
gi|119586571|gb|EAW66167.1| poly(A) binding protein, nuclear 1, isoform CRA_a [Homo sapiens]
gi|119586572|gb|EAW66168.1| poly(A) binding protein, nuclear 1, isoform CRA_a [Homo sapiens]
gi|387539310|gb|AFJ70282.1| polyadenylate-binding protein 2 [Macaca mulatta]
Length = 306
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 63/121 (52%), Gaps = 7/121 (5%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
S+ V N+ Y T ++L F CG V + I D+F+ +GFA++ F DK +L A
Sbjct: 173 SIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSL-A 231
Query: 75 MDGRMLDGRELRVQMARYGRPPSSSRSRG---GRDRDRRRDRSRSRDRRYTRSRSFSSRS 131
+D + GR+++V R RP S+ RG R R R + + SR R Y+ F+SR
Sbjct: 232 LDESLFRGRQIKVIPKRTNRPGISTTDRGFPRARYRARTTNYNSSRSRFYS---GFNSRP 288
Query: 132 R 132
R
Sbjct: 289 R 289
>gi|390438650|ref|ZP_10227098.1| putative RNA-binding protein rbpF [Microcystis sp. T1-4]
gi|389837939|emb|CCI31222.1| putative RNA-binding protein rbpF [Microcystis sp. T1-4]
Length = 97
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 54/97 (55%), Gaps = 1/97 (1%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
+S+ V NL+Y + +DL VF G V ++IP DR T RGFAFV +K A++
Sbjct: 1 MSIFVGNLSYEISQEDLTDVFAEYGTVQRVHIPVDRETGRKRGFAFVEMENKAQETAAIE 60
Query: 74 AMDGRMLDGRELRVQMARYGRPPSSSRSRGGRDRDRR 110
A+DG GR ++V AR R + S GG DR +R
Sbjct: 61 ALDGADWMGRSIKVNEARE-REARAPFSGGGGDRKKR 96
>gi|291403571|ref|XP_002717950.1| PREDICTED: poly(A) binding protein, nuclear 1-like [Oryctolagus
cuniculus]
Length = 366
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 63/121 (52%), Gaps = 7/121 (5%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
S+ V N+ Y T ++L F CG V + I D+F+ +GFA++ F DK +L A
Sbjct: 233 SIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSL-A 291
Query: 75 MDGRMLDGRELRVQMARYGRPPSSSRSRG---GRDRDRRRDRSRSRDRRYTRSRSFSSRS 131
+D + GR+++V R RP S+ RG R R R + + SR R Y+ F+SR
Sbjct: 292 LDESLFRGRQIKVIPKRTNRPGISTTDRGFPRARYRARTTNYNSSRSRFYS---GFNSRP 348
Query: 132 R 132
R
Sbjct: 349 R 349
>gi|149063931|gb|EDM14201.1| poly(A) binding protein, nuclear 1, isoform CRA_c [Rattus
norvegicus]
Length = 194
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 63/121 (52%), Gaps = 7/121 (5%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
S+ V N+ Y T ++L F CG V + I D+F+ +GFA++ F DK +L A
Sbjct: 61 SIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSL-A 119
Query: 75 MDGRMLDGRELRVQMARYGRPPSSSRSRG---GRDRDRRRDRSRSRDRRYTRSRSFSSRS 131
+D + GR+++V R RP S+ RG R R R + + SR R Y+ F+SR
Sbjct: 120 LDESLFRGRQIKVIPKRTNRPGISTTDRGFPRARYRARTTNYNSSRSRFYS---GFNSRP 176
Query: 132 R 132
R
Sbjct: 177 R 177
>gi|148704375|gb|EDL36322.1| poly(A) binding protein, nuclear 1, isoform CRA_a [Mus musculus]
Length = 294
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 62/123 (50%), Gaps = 11/123 (8%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
S+ V N+ Y T ++L F CG V + I D+F+ +GFA++ F DK +L A
Sbjct: 171 SIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSL-A 229
Query: 75 MDGRMLDGRELRVQMARYGRPPSSSRSRGGRDRDRRRDRSRSRDRRYTRSRS-----FSS 129
+D + GR+++V R RP S+ DR R R R+R Y SRS F+S
Sbjct: 230 LDESLFRGRQIKVIPKRTNRPGIST-----TDRGFPRSRYRARTTNYNSSRSRFYSGFNS 284
Query: 130 RSR 132
R R
Sbjct: 285 RPR 287
>gi|431907175|gb|ELK11241.1| Polyadenylate-binding protein 2 [Pteropus alecto]
Length = 208
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 63/121 (52%), Gaps = 7/121 (5%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
S+ V N+ Y T ++L F CG V + I D+F+ +GFA++ F DK +L A
Sbjct: 75 SIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSL-A 133
Query: 75 MDGRMLDGRELRVQMARYGRPPSSSRSRG---GRDRDRRRDRSRSRDRRYTRSRSFSSRS 131
+D + GR+++V R RP S+ RG R R R + + SR R Y+ F+SR
Sbjct: 134 LDESLFRGRQIKVIPKRTNRPGISTTDRGFPRARYRARTTNYNSSRSRFYS---GFNSRP 190
Query: 132 R 132
R
Sbjct: 191 R 191
>gi|226504024|ref|NP_001140489.1| uncharacterized protein LOC100272550 [Zea mays]
gi|194699696|gb|ACF83932.1| unknown [Zea mays]
gi|448878232|gb|AGE46079.1| arginine/serine-rich splicing factor SCL28 transcript II [Zea mays]
Length = 188
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 55/107 (51%), Gaps = 6/107 (5%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L + N++ P+D+R FE+ G + D+Y+PR+ TRE RGF FV+F DA A M
Sbjct: 59 LLIRNISLTARPEDIRATFEQFGPIKDVYLPRNFHTRELRGFGFVKFRYPEDAAVAKREM 118
Query: 76 DGRMLDGRELRVQMARYGRPPSSSRSRGGRDRDRRRDRSRSRDRRYT 122
+++ GRE+ + A +R R R R R D RYT
Sbjct: 119 HHQVIGGREISIVYA------EENRKTPQEMRMRTRTSGRYMDERYT 159
>gi|380800735|gb|AFE72243.1| polyadenylate-binding protein 2, partial [Macaca mulatta]
Length = 273
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 63/121 (52%), Gaps = 7/121 (5%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
S+ V N+ Y T ++L F CG V + I D+F+ +GFA++ F DK +L A
Sbjct: 140 SIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSL-A 198
Query: 75 MDGRMLDGRELRVQMARYGRPPSSSRSRG---GRDRDRRRDRSRSRDRRYTRSRSFSSRS 131
+D + GR+++V R RP S+ RG R R R + + SR R Y+ F+SR
Sbjct: 199 LDESLFRGRQIKVIPKRTNRPGISTTDRGFPRARYRARTTNYNSSRSRFYS---GFNSRP 255
Query: 132 R 132
R
Sbjct: 256 R 256
>gi|28193136|emb|CAD62310.1| unnamed protein product [Homo sapiens]
Length = 298
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 63/121 (52%), Gaps = 7/121 (5%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
S+ V N+ Y T ++L F CG V + I D+F+ +GFA++ F DK +L A
Sbjct: 175 SIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSL-A 233
Query: 75 MDGRMLDGRELRVQMARYGRPPSSSRSRG---GRDRDRRRDRSRSRDRRYTRSRSFSSRS 131
+D + GR+++V R RP S+ RG R R R + + SR R Y+ F+SR
Sbjct: 234 LDESLFRGRQIKVIPKRTNRPGISTTDRGFPRARYRARTTNYNSSRSRFYS---GFNSRP 290
Query: 132 R 132
R
Sbjct: 291 R 291
>gi|220910060|ref|YP_002485371.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7425]
gi|219866671|gb|ACL47010.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7425]
Length = 99
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 45/78 (57%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
+S+ V NL+Y T +DL + F G V +++P DR T RGFAFV + A++
Sbjct: 1 MSIYVGNLSYSVTQNDLIQAFTEYGSVKSVHLPTDRETGRLRGFAFVEMSTSDEETAAIE 60
Query: 74 AMDGRMLDGRELRVQMAR 91
A+DG GR+L+V AR
Sbjct: 61 ALDGAEWMGRDLKVNKAR 78
>gi|449298839|gb|EMC94854.1| hypothetical protein BAUCODRAFT_149939 [Baudoinia compniacensis UAMH
10762]
Length = 2038
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 66/138 (47%), Gaps = 23/138 (16%)
Query: 6 PPPR----------IEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESR 55
PPP+ I +L V + R + D++ R+FE+ G V I RD TRESR
Sbjct: 1807 PPPKRGQDDDDDESINPGSNLFVTGIHPRLSEDEITRLFEKYGAVEKCNIMRDPHTRESR 1866
Query: 56 GFAFVRFFDKRDAEDALDAMDGRMLDGRELRVQMARYGRP--PSSSR-----------SR 102
GF FV+ +A+ A D + G + +GR L ++ AR RP P+ + +R
Sbjct: 1867 GFGFVKMTTPEEADAAKDGLQGEVYEGRTLSIEKARRARPRTPTPGKYFGPPKRDERPAR 1926
Query: 103 GGRDRDRRRDRSRSRDRR 120
GG RDR DR RR
Sbjct: 1927 GGGYRDRYDDRGSGYGRR 1944
>gi|417409281|gb|JAA51155.1| Putative splicing factor rnps1 sr protein superfamily, partial
[Desmodus rotundus]
Length = 278
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 63/121 (52%), Gaps = 7/121 (5%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
S+ V N+ Y T ++L F CG V + I D+F+ +GFA++ F DK +L A
Sbjct: 155 SIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSL-A 213
Query: 75 MDGRMLDGRELRVQMARYGRPPSSSRSRG---GRDRDRRRDRSRSRDRRYTRSRSFSSRS 131
+D + GR+++V R RP S+ RG R R R + + SR R Y+ F+SR
Sbjct: 214 LDESLFRGRQIKVIPKRTNRPGISTTDRGFPRARYRARTTNYNSSRSRFYS---GFNSRP 270
Query: 132 R 132
R
Sbjct: 271 R 271
>gi|395536427|ref|XP_003770219.1| PREDICTED: transformer-2 protein homolog beta-like [Sarcophilus
harrisii]
Length = 288
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 48/82 (58%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
L V L+ TT DLR VF + G + D+ I D+ +R SRGFAFV F + DA++A +
Sbjct: 118 CCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKE 177
Query: 74 AMDGRMLDGRELRVQMARYGRP 95
+G LDGR +RV + RP
Sbjct: 178 RANGMELDGRRIRVDFSITKRP 199
>gi|67479353|ref|XP_655058.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|56472162|gb|EAL49670.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
Length = 685
Score = 62.8 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 28/74 (37%), Positives = 47/74 (63%)
Query: 18 VDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAMDG 77
+ NL + T DD+R+ F+R G + +I++P D+ T++S+GF FV F +DA A + MD
Sbjct: 191 ITNLPFNCTEDDIRKEFDRFGNIAEIHLPIDKITKKSKGFGFVLFVVPQDAVKACNEMDN 250
Query: 78 RMLDGRELRVQMAR 91
+ + GR + V A+
Sbjct: 251 KFIKGRIVHVTYAK 264
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 53/83 (63%), Gaps = 2/83 (2%)
Query: 11 EGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIP--RDRFTRESRGFAFVRFFDKRDA 68
EG +L V N++++T D +R+VFE+CG V I + +D+ ++ GF FV + DA
Sbjct: 501 EGSKTLYVKNISFKTKEDVIRKVFEKCGRVLAITLSKTKDKKVEKNSGFGFVEYAKHEDA 560
Query: 69 EDALDAMDGRMLDGRELRVQMAR 91
+A+ + G+++DG +++++++
Sbjct: 561 INAIKTLQGKVIDGHAVQIEISQ 583
Score = 40.4 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 21/76 (27%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L V N+ + T ++R +F G + + +P+ + +++GFAFV + K++A +A+ A+
Sbjct: 606 LLVKNVPFETNIKEVRELFRTYGTLRGVRLPK-KVDGQNKGFAFVEYATKQEAANAMAAL 664
Query: 76 DGRMLDGRELRVQMAR 91
GR L ++ A+
Sbjct: 665 KNSHFYGRHLIIEYAK 680
Score = 35.8 bits (81), Expect = 6.4, Method: Composition-based stats.
Identities = 22/79 (27%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 13 MVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDAL 72
M + + NL R L++ FE+ G + D + R SR F F+ F ++ A+ A+
Sbjct: 1 MSRIIIKNLPERADEKILKQQFEKFGGITDCKVMRTP-QGNSRKFGFIGFENEDQAQTAI 59
Query: 73 DAMDGRMLDGRELRVQMAR 91
M+G + +L+V +A+
Sbjct: 60 TKMNGAYIQSSKLQVSLAK 78
>gi|417398942|gb|JAA46504.1| Putative splicing factor rnps1 sr protein superfamily [Desmodus
rotundus]
Length = 323
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 63/121 (52%), Gaps = 7/121 (5%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
S+ V N+ Y T ++L F CG V + I D+F+ +GFA++ F DK +L A
Sbjct: 200 SIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSL-A 258
Query: 75 MDGRMLDGRELRVQMARYGRPPSSSRSRG---GRDRDRRRDRSRSRDRRYTRSRSFSSRS 131
+D + GR+++V R RP S+ RG R R R + + SR R Y+ F+SR
Sbjct: 259 LDESLFRGRQIKVIPKRTNRPGISTTDRGFPRARYRARTTNYNSSRSRFYS---GFNSRP 315
Query: 132 R 132
R
Sbjct: 316 R 316
>gi|351697106|gb|EHB00025.1| Polyadenylate-binding protein 2, partial [Heterocephalus glaber]
Length = 189
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 63/121 (52%), Gaps = 7/121 (5%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
S+ V N+ Y T ++L F CG V + I D+F+ +GFA++ F DK +L A
Sbjct: 56 SIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSL-A 114
Query: 75 MDGRMLDGRELRVQMARYGRPPSSSRSRG---GRDRDRRRDRSRSRDRRYTRSRSFSSRS 131
+D + GR+++V R RP S+ RG R R R + + SR R Y+ F+SR
Sbjct: 115 LDESLFRGRQIKVIPKRTNRPGISTTDRGFPRARYRARTTNYNSSRSRFYS---GFNSRP 171
Query: 132 R 132
R
Sbjct: 172 R 172
>gi|348577533|ref|XP_003474538.1| PREDICTED: polyadenylate-binding protein 2-like [Cavia porcellus]
Length = 306
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 63/121 (52%), Gaps = 7/121 (5%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
S+ V N+ Y T ++L F CG V + I D+F+ +GFA++ F DK +L A
Sbjct: 173 SIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSL-A 231
Query: 75 MDGRMLDGRELRVQMARYGRPPSSSRSRG---GRDRDRRRDRSRSRDRRYTRSRSFSSRS 131
+D + GR+++V R RP S+ RG R R R + + SR R Y+ F+SR
Sbjct: 232 LDESLFRGRQIKVIPKRTNRPGISTTDRGFPRARYRARTTNYNSSRSRFYS---GFNSRP 288
Query: 132 R 132
R
Sbjct: 289 R 289
>gi|327267358|ref|XP_003218469.1| PREDICTED: transformer-2 protein homolog beta-like [Anolis
carolinensis]
Length = 297
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 48/82 (58%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
L V L+ TT DLR VF + G + D+ I D+ +R SRGFAFV F + DA++A +
Sbjct: 118 CCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKE 177
Query: 74 AMDGRMLDGRELRVQMARYGRP 95
+G LDGR +RV + RP
Sbjct: 178 RANGMELDGRRIRVDFSITKRP 199
>gi|315434255|ref|NP_001186793.1| BCL2L2-PABPN1 protein [Homo sapiens]
gi|332223067|ref|XP_003260692.1| PREDICTED: polyadenylate-binding protein 2-like isoform 1 [Nomascus
leucogenys]
gi|338717165|ref|XP_003363601.1| PREDICTED: polyadenylate-binding protein 2-like isoform 2 [Equus
caballus]
gi|397473278|ref|XP_003808142.1| PREDICTED: polyadenylate-binding protein 2 [Pan paniscus]
gi|403264162|ref|XP_003924360.1| PREDICTED: polyadenylate-binding protein 2 [Saimiri boliviensis
boliviensis]
gi|410961928|ref|XP_003987530.1| PREDICTED: polyadenylate-binding protein 2 isoform 3 [Felis catus]
gi|426232740|ref|XP_004010379.1| PREDICTED: polyadenylate-binding protein 2 [Ovis aries]
gi|410267786|gb|JAA21859.1| BCL2L2-PABPN1 readthrough [Pan troglodytes]
gi|417399112|gb|JAA46586.1| Putative splicing factor rnps1 sr protein superfamily [Desmodus
rotundus]
Length = 333
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 63/121 (52%), Gaps = 7/121 (5%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
S+ V N+ Y T ++L F CG V + I D+F+ +GFA++ F DK +L A
Sbjct: 200 SIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSL-A 258
Query: 75 MDGRMLDGRELRVQMARYGRPPSSSRSRG---GRDRDRRRDRSRSRDRRYTRSRSFSSRS 131
+D + GR+++V R RP S+ RG R R R + + SR R Y+ F+SR
Sbjct: 259 LDESLFRGRQIKVIPKRTNRPGISTTDRGFPRARYRARTTNYNSSRSRFYS---GFNSRP 315
Query: 132 R 132
R
Sbjct: 316 R 316
>gi|225156280|ref|ZP_03724758.1| RNP-1 like RNA-binding protein [Diplosphaera colitermitum TAV2]
gi|224803012|gb|EEG21257.1| RNP-1 like RNA-binding protein [Diplosphaera colitermitum TAV2]
Length = 106
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 58/104 (55%), Gaps = 5/104 (4%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L V NL++ T+ DLR F CG + D+++ DR T RGFAFV F +++ A + +
Sbjct: 5 LYVGNLSFNTSEADLRTAFSTCGTLTDVFLATDRETGRPRGFAFVTFDTAEESQLATEKL 64
Query: 76 DGRMLDGRELRVQMARYGRPPSSSRSRGGRDR--DRRRDRSRSR 117
+G L GR + V A RP ++ G R+ DR+ +SR+R
Sbjct: 65 NGTDLGGRAITVNEA---RPKEATGGGGSRNFGPDRKPFQSRNR 105
>gi|332024948|gb|EGI65135.1| Putative RNA-binding protein 19 [Acromyrmex echinatior]
Length = 862
Score = 62.8 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 29/70 (41%), Positives = 44/70 (62%)
Query: 18 VDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAMDG 77
+ NLTY TT DD+R++FE+ G + ++ +P DR TR+ +GF + F A A +DG
Sbjct: 325 IRNLTYTTTEDDVRKLFEKYGPLSEVDLPIDRMTRKPKGFGTITFLMPEHAVKAYSELDG 384
Query: 78 RMLDGRELRV 87
+LDGR L +
Sbjct: 385 SILDGRMLHI 394
Score = 44.7 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 7/87 (8%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYI-----PRDRFTRESRGFAFVR 61
PP E +L V N+ + TT + L+ F +CG + I I P + + S G+ F+R
Sbjct: 629 PP--ESDTTLFVKNINFSTTEEQLKDYFGKCGPLHYITIATKMDPENPAKKLSMGYGFIR 686
Query: 62 FFDKRDAEDALDAMDGRMLDGRELRVQ 88
+ K DA+ AL + +LDG+ L ++
Sbjct: 687 YKRKFDADRALKTLQMSVLDGKSLELK 713
Score = 40.0 bits (92), Expect = 0.36, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 18 VDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRF-TRESRGFAFVRFFDKRDAEDALDAM- 75
V N+ ++ T ++ +F+ GE+ + +P+ T + RGFAF+ ++ K DA+ A A+
Sbjct: 742 VRNIPFQATVQEVTELFKSYGELKAVRLPKKLVGTEKHRGFAFIEYYTKSDAKKAFKALC 801
Query: 76 DGRMLDGRELRVQMAR 91
L GR L ++ A+
Sbjct: 802 QSTHLYGRRLVLEWAQ 817
>gi|343459003|gb|AEM37660.1| cold inducible RNA binding protein [Epinephelus bruneus]
Length = 176
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 52/88 (59%), Gaps = 2/88 (2%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L + L++ T + L F + G + + + RD+ T SRGF FV++ + DA+DAL+ M
Sbjct: 7 LFIGGLSFETNEESLAAAFGKYGTIEKVDVIRDKETGRSRGFGFVKYDNSDDAKDALEGM 66
Query: 76 DGRMLDGRELRVQMARYGRPPSSSRSRG 103
+G+ LDGR +RV A G+ S+R G
Sbjct: 67 NGKTLDGRAIRVDEA--GKGGRSNRGFG 92
>gi|115474735|ref|NP_001060964.1| Os08g0139000 [Oryza sativa Japonica Group]
gi|38636774|dbj|BAD03017.1| putative RNA recognition motif (RRM)-containing protein [Oryza
sativa Japonica Group]
gi|113622933|dbj|BAF22878.1| Os08g0139000 [Oryza sativa Japonica Group]
gi|215767574|dbj|BAG99802.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222639884|gb|EEE68016.1| hypothetical protein OsJ_25986 [Oryza sativa Japonica Group]
Length = 141
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 45/82 (54%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
+L + L+ RTT D L+ F + GEV + DR T S+GF FVR+ DA ++
Sbjct: 37 NLFISGLSKRTTTDGLKEAFAKFGEVIHARVVTDRVTGFSKGFGFVRYATVEDAAKGIEG 96
Query: 75 MDGRMLDGRELRVQMARYGRPP 96
MDG+ LDG + + AR PP
Sbjct: 97 MDGKFLDGWVIFAEYARPRTPP 118
>gi|308804285|ref|XP_003079455.1| RSP4_CAEEL Probable splicing factor, arginine/serine-rich 4 (ISS)
[Ostreococcus tauri]
gi|116057910|emb|CAL54113.1| RSP4_CAEEL Probable splicing factor, arginine/serine-rich 4 (ISS)
[Ostreococcus tauri]
Length = 100
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 36/52 (69%)
Query: 8 PRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAF 59
P + +VS+K+DNL+Y +DLR F R GE+GD+Y+P DR TR RGF F
Sbjct: 46 PDVNDLVSVKIDNLSYDAREEDLREAFSRYGEIGDVYVPLDRETRRPRGFCF 97
>gi|355725838|gb|AES08680.1| transformer 2 beta-like protein [Mustela putorius furo]
Length = 297
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 48/82 (58%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
L V L+ TT DLR VF + G + D+ I D+ +R SRGFAFV F + DA++A +
Sbjct: 176 CCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKE 235
Query: 74 AMDGRMLDGRELRVQMARYGRP 95
+G LDGR +RV + RP
Sbjct: 236 RANGMELDGRRIRVDFSITKRP 257
>gi|320588622|gb|EFX01090.1| transformer-SR ribonucleoprotein [Grosmannia clavigera kw1407]
Length = 235
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 48/81 (59%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
+L V + R + +++ R+FE+ GEV I RD T+ESRGF FV+ A+ A D
Sbjct: 80 NLFVTGIHPRLSEEEVSRLFEKYGEVEKCQIMRDPHTKESRGFGFVKMVTSDQADAAKDG 139
Query: 75 MDGRMLDGRELRVQMARYGRP 95
+ G ++DGR L ++ AR RP
Sbjct: 140 LQGEVIDGRSLSIEKARRARP 160
>gi|297297505|ref|XP_001107287.2| PREDICTED: polyadenylate-binding protein 2-like isoform 2 [Macaca
mulatta]
Length = 355
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 63/121 (52%), Gaps = 7/121 (5%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
S+ V N+ Y T ++L F CG V + I D+F+ +GFA++ F DK +L A
Sbjct: 232 SIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSL-A 290
Query: 75 MDGRMLDGRELRVQMARYGRPPSSSRSRG---GRDRDRRRDRSRSRDRRYTRSRSFSSRS 131
+D + GR+++V R RP S+ RG R R R + + SR R Y+ F+SR
Sbjct: 291 LDESLFRGRQIKVIPKRTNRPGISTTDRGFPRARYRARTTNYNSSRSRFYS---GFNSRP 347
Query: 132 R 132
R
Sbjct: 348 R 348
>gi|189055016|dbj|BAG38000.1| unnamed protein product [Homo sapiens]
Length = 288
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 48/82 (58%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
L V L+ TT DLR VF + G + D+ I D+ +R SRGFAFV F + DA++A +
Sbjct: 118 CCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKE 177
Query: 74 AMDGRMLDGRELRVQMARYGRP 95
+G LDGR +RV + RP
Sbjct: 178 RANGMELDGRRIRVDFSITKRP 199
>gi|351709599|gb|EHB12518.1| Transformer-2 protein-like protein beta [Heterocephalus glaber]
Length = 290
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 48/82 (58%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
L V L+ TT DLR VF + G + D+ I D+ +R SRGFAFV F + DA++A +
Sbjct: 118 CCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKE 177
Query: 74 AMDGRMLDGRELRVQMARYGRP 95
+G LDGR +RV + RP
Sbjct: 178 RANGMELDGRRIRVDFSITKRP 199
>gi|405959140|gb|EKC25204.1| Splicing factor, arginine/serine-rich 7 [Crassostrea gigas]
Length = 318
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 63/122 (51%), Gaps = 10/122 (8%)
Query: 10 IEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAE 69
++ + + V LT L +FER G V ++I R+ SRG+AFV FFD + AE
Sbjct: 8 VKSIAKVYVGGLTENVEKYHLEELFERFGLVKTVWIARNPL---SRGYAFVTFFDPKHAE 64
Query: 70 DALDAMDGRMLDGRELRVQMARYGRPPSSSRSRGGRDRD------RRRDRSRSRDRRYTR 123
+A+ ++G L G +L+VQ+++ RDRD +RR RSR R++ R
Sbjct: 65 EAVKGLNGTALQGSKLKVQLSK-NEIVKVENEHKDRDRDPRDHTNQRRHRSRDRNQYMDR 123
Query: 124 SR 125
R
Sbjct: 124 KR 125
>gi|355559800|gb|EHH16528.1| hypothetical protein EGK_11817, partial [Macaca mulatta]
gi|355746830|gb|EHH51444.1| hypothetical protein EGM_10813, partial [Macaca fascicularis]
Length = 288
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 48/82 (58%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
L V L+ TT DLR VF + G + D+ I D+ +R SRGFAFV F + DA++A +
Sbjct: 118 CCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKE 177
Query: 74 AMDGRMLDGRELRVQMARYGRP 95
+G LDGR +RV + RP
Sbjct: 178 RANGMELDGRRIRVDFSITKRP 199
>gi|344282129|ref|XP_003412827.1| PREDICTED: transformer-2 protein homolog beta-like [Loxodonta
africana]
Length = 390
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 48/82 (58%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
L V L+ TT DLR VF + G + D+ I D+ +R SRGFAFV F + DA++A +
Sbjct: 212 CCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKE 271
Query: 74 AMDGRMLDGRELRVQMARYGRP 95
+G LDGR +RV + RP
Sbjct: 272 RANGMELDGRRIRVDFSITKRP 293
>gi|301759721|ref|XP_002915754.1| PREDICTED: hypothetical protein LOC100477296 [Ailuropoda
melanoleuca]
Length = 440
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 48/82 (58%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
L V L+ TT DLR VF + G + D+ I D+ +R SRGFAFV F + DA++A +
Sbjct: 270 CCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKE 329
Query: 74 AMDGRMLDGRELRVQMARYGRP 95
+G LDGR +RV + RP
Sbjct: 330 RANGMELDGRRIRVDFSITKRP 351
>gi|444728816|gb|ELW69258.1| Bcl-2-like protein 2 [Tupaia chinensis]
Length = 367
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 63/121 (52%), Gaps = 7/121 (5%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
S+ V N+ Y T ++L F CG V + I D+F+ +GFA++ F DK +L A
Sbjct: 239 SIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSL-A 297
Query: 75 MDGRMLDGRELRVQMARYGRPPSSSRSRG---GRDRDRRRDRSRSRDRRYTRSRSFSSRS 131
+D + GR+++V R RP S+ RG R R R + + SR R Y+ F+SR
Sbjct: 298 LDESLFRGRQIKVIPKRTNRPGISTTDRGFPRARYRARTTNYNSSRSRFYS---GFNSRP 354
Query: 132 R 132
R
Sbjct: 355 R 355
>gi|354488039|ref|XP_003506178.1| PREDICTED: polyadenylate-binding protein 2-like [Cricetulus
griseus]
Length = 333
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 63/121 (52%), Gaps = 7/121 (5%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
S+ V N+ Y T ++L F CG V + I D+F+ +GFA++ F DK +L A
Sbjct: 200 SIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSL-A 258
Query: 75 MDGRMLDGRELRVQMARYGRPPSSSRSRG---GRDRDRRRDRSRSRDRRYTRSRSFSSRS 131
+D + GR+++V R RP S+ RG R R R + + SR R Y+ F+SR
Sbjct: 259 LDESLFRGRQIKVIPKRTNRPGISTTDRGFPRARYRARTTNYNSSRSRFYS---GFNSRP 315
Query: 132 R 132
R
Sbjct: 316 R 316
>gi|332298346|ref|YP_004440268.1| RNP-1 like RNA-binding protein [Treponema brennaborense DSM 12168]
gi|332181449|gb|AEE17137.1| RNP-1 like RNA-binding protein [Treponema brennaborense DSM 12168]
Length = 117
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 52/88 (59%), Gaps = 2/88 (2%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
+ V NL YRTT D L F + GE+ + +D+FT +S+GF F+ D A+ A+ M
Sbjct: 5 IYVGNLNYRTTEDTLSSAFSQYGEIVSAVVIKDKFTEQSKGFGFIEMADDAAADAAIADM 64
Query: 76 DGRMLDGRELRVQMARYGRPPSSSRSRG 103
+G+ +DGR +RV +A P +SR RG
Sbjct: 65 NGKEVDGRRVRVNIAE--DKPRTSRPRG 90
>gi|295663727|ref|XP_002792416.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226279086|gb|EEH34652.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 308
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 48/81 (59%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
+L V + R T D+ R+FE+ G+V + I D T+ESRGF FV+ A+ A +
Sbjct: 73 NLFVTGIHPRLTESDVSRLFEKYGDVENCSIMLDPHTKESRGFGFVKMVTAEQADAAKEG 132
Query: 75 MDGRMLDGRELRVQMARYGRP 95
+ G +++GR L ++ AR GRP
Sbjct: 133 LQGEVIEGRTLSIEKARRGRP 153
>gi|56756196|gb|AAW26273.1| unknown [Schistosoma japonicum]
Length = 224
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 58/114 (50%), Gaps = 7/114 (6%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L + L +DL R +CGEV D+++ R GFAF + DAE A+ ++
Sbjct: 12 LYIGGLVENVLKEDLVRELSKCGEVVDVWV-----ARNPPGFAFAEYVKSSDAEKAVRSL 66
Query: 76 DGRMLDGRELRVQMARYGRPPSSSRS--RGGRDRDRRRDRSRSRDRRYTRSRSF 127
DG + G +RV+ A GR S+ RS RGGR R R R+ RR R+ S+
Sbjct: 67 DGVNVCGSRIRVEFAHGGRSKSAVRSAFRGGRPVGRGSLRRRNSPRRNGRNSSY 120
>gi|4759098|ref|NP_004584.1| transformer-2 protein homolog beta isoform 1 [Homo sapiens]
gi|6677975|ref|NP_033212.1| transformer-2 protein homolog beta [Mus musculus]
gi|16923966|ref|NP_476460.1| transformer-2 protein homolog beta [Rattus norvegicus]
gi|77736495|ref|NP_001029948.1| transformer-2 protein homolog beta [Bos taurus]
gi|116175275|ref|NP_001070689.1| transformer-2 protein homolog beta [Sus scrofa]
gi|386780576|ref|NP_001248265.1| transformer-2 protein homolog beta [Macaca mulatta]
gi|114590871|ref|XP_530672.2| PREDICTED: transformer-2 protein homolog beta isoform 3 [Pan
troglodytes]
gi|194222668|ref|XP_001497871.2| PREDICTED: transformer-2 protein homolog beta-like isoform 1 [Equus
caballus]
gi|296224784|ref|XP_002758193.1| PREDICTED: transformer-2 protein homolog beta [Callithrix jacchus]
gi|332215039|ref|XP_003256645.1| PREDICTED: transformer-2 protein homolog beta isoform 1 [Nomascus
leucogenys]
gi|345796409|ref|XP_535833.3| PREDICTED: transformer-2 protein homolog beta [Canis lupus
familiaris]
gi|354484188|ref|XP_003504272.1| PREDICTED: transformer-2 protein homolog beta-like [Cricetulus
griseus]
gi|395839823|ref|XP_003792775.1| PREDICTED: transformer-2 protein homolog beta [Otolemur garnettii]
gi|397470084|ref|XP_003806663.1| PREDICTED: transformer-2 protein homolog beta [Pan paniscus]
gi|402860695|ref|XP_003894758.1| PREDICTED: transformer-2 protein homolog beta [Papio anubis]
gi|403270092|ref|XP_003927029.1| PREDICTED: transformer-2 protein homolog beta-like [Saimiri
boliviensis boliviensis]
gi|410970819|ref|XP_003991874.1| PREDICTED: transformer-2 protein homolog beta [Felis catus]
gi|426217758|ref|XP_004003119.1| PREDICTED: transformer-2 protein homolog beta [Ovis aries]
gi|426343199|ref|XP_004038202.1| PREDICTED: transformer-2 protein homolog beta isoform 1 [Gorilla
gorilla gorilla]
gi|51703329|sp|P62997.1|TRA2B_RAT RecName: Full=Transformer-2 protein homolog beta; Short=TRA-2 beta;
Short=TRA2-beta; AltName: Full=RA301; AltName:
Full=Splicing factor, arginine/serine-rich 10; AltName:
Full=Transformer-2 protein homolog B
gi|51703330|sp|P62995.1|TRA2B_HUMAN RecName: Full=Transformer-2 protein homolog beta; Short=TRA-2 beta;
Short=TRA2-beta; Short=hTRA2-beta; AltName:
Full=Splicing factor, arginine/serine-rich 10; AltName:
Full=Transformer-2 protein homolog B
gi|51703331|sp|P62996.1|TRA2B_MOUSE RecName: Full=Transformer-2 protein homolog beta; Short=TRA-2 beta;
Short=TRA2-beta; AltName: Full=Silica-induced gene 41
protein; Short=SIG-41; AltName: Full=Splicing factor,
arginine/serine-rich 10; AltName: Full=Transformer-2
protein homolog B
gi|122143022|sp|Q3ZBT6.1|TRA2B_BOVIN RecName: Full=Transformer-2 protein homolog beta; Short=TRA-2 beta;
Short=TRA2-beta; AltName: Full=Splicing factor,
arginine/serine-rich 10; AltName: Full=Transformer-2
protein homolog B
gi|1255683|dbj|BAA08556.1| RNA binding protein (transformer-2-like) [Rattus norvegicus]
gi|1279558|emb|CAA56518.1| SIG41 [Mus musculus]
gi|1418286|gb|AAC28242.1| htra2-beta [Homo sapiens]
gi|1553035|gb|AAB08701.1| transformer-2 beta [Homo sapiens]
gi|4377848|gb|AAD19277.1| transformer-2-beta isoform 1 [Homo sapiens]
gi|12652815|gb|AAH00160.1| Transformer 2 beta homolog (Drosophila) [Homo sapiens]
gi|12653363|gb|AAH00451.1| Transformer 2 beta homolog (Drosophila) [Homo sapiens]
gi|13543480|gb|AAH05898.1| Transformer 2 beta homolog (Drosophila) [Homo sapiens]
gi|26340312|dbj|BAC33819.1| unnamed protein product [Mus musculus]
gi|38174351|gb|AAH61177.1| Splicing factor, arginine/serine-rich 10 (transformer 2 homolog,
Drosophila) [Mus musculus]
gi|47477836|gb|AAH70948.1| Splicing factor, arginine/serine-rich 10 (transformer 2 homolog,
Drosophila) [Rattus norvegicus]
gi|73586673|gb|AAI03114.1| Transformer 2 beta homolog (Drosophila) [Bos taurus]
gi|115371737|gb|ABI96193.1| TRA2B [Sus scrofa]
gi|119598612|gb|EAW78206.1| splicing factor, arginine/serine-rich 10 (transformer 2 homolog,
Drosophila), isoform CRA_b [Homo sapiens]
gi|123980068|gb|ABM81863.1| splicing factor, arginine/serine-rich 10 (transformer 2 homolog,
Drosophila) [synthetic construct]
gi|148665208|gb|EDK97624.1| mCG127344, isoform CRA_a [Mus musculus]
gi|149019900|gb|EDL78048.1| splicing factor, arginine/serine-rich 10 (transformer 2 homolog,
Drosophila) [Rattus norvegicus]
gi|157928074|gb|ABW03333.1| splicing factor, arginine/serine-rich 10 (transformer 2 homolog,
Drosophila) [synthetic construct]
gi|296491312|tpg|DAA33375.1| TPA: transformer-2 protein homolog beta [Bos taurus]
gi|307685141|dbj|BAJ20501.1| transformer 2 beta homolog [synthetic construct]
gi|344239811|gb|EGV95914.1| Transformer-2 protein-like beta [Cricetulus griseus]
gi|380815584|gb|AFE79666.1| transformer-2 protein homolog beta [Macaca mulatta]
gi|383420761|gb|AFH33594.1| transformer-2 protein homolog beta [Macaca mulatta]
gi|410211132|gb|JAA02785.1| transformer 2 beta homolog [Pan troglodytes]
gi|410264594|gb|JAA20263.1| transformer 2 beta homolog [Pan troglodytes]
gi|410302962|gb|JAA30081.1| transformer 2 beta homolog [Pan troglodytes]
Length = 288
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 48/82 (58%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
L V L+ TT DLR VF + G + D+ I D+ +R SRGFAFV F + DA++A +
Sbjct: 118 CCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKE 177
Query: 74 AMDGRMLDGRELRVQMARYGRP 95
+G LDGR +RV + RP
Sbjct: 178 RANGMELDGRRIRVDFSITKRP 199
>gi|384501386|gb|EIE91877.1| hypothetical protein RO3G_16588 [Rhizopus delemar RA 99-880]
Length = 184
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 45/76 (59%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
++ NL Y D+ +FER G + I +P D T +++GFAFV F ++RDAEDA +
Sbjct: 109 TTIYAGNLPYDFVERDVATMFERYGRLKSITVPLDTVTNKNKGFAFVEFEERRDAEDAFE 168
Query: 74 AMDGRMLDGRELRVQM 89
DG ++GR LR+
Sbjct: 169 KFDGFSVEGRRLRLDW 184
>gi|90078208|dbj|BAE88784.1| unnamed protein product [Macaca fascicularis]
Length = 288
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 48/82 (58%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
L V L+ TT DLR VF + G + D+ I D+ +R SRGFAFV F + DA++A +
Sbjct: 118 CCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKE 177
Query: 74 AMDGRMLDGRELRVQMARYGRP 95
+G LDGR +RV + RP
Sbjct: 178 RANGMELDGRRIRVDFSITKRP 199
>gi|449707231|gb|EMD46930.1| RNA recognition domain containing protein [Entamoeba histolytica
KU27]
Length = 685
Score = 62.8 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 28/74 (37%), Positives = 47/74 (63%)
Query: 18 VDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAMDG 77
+ NL + T DD+R+ F+R G + +I++P D+ T++S+GF FV F +DA A + MD
Sbjct: 191 ITNLPFNCTEDDIRKEFDRFGNIAEIHLPIDKITKKSKGFGFVLFVVPQDAVKACNEMDN 250
Query: 78 RMLDGRELRVQMAR 91
+ + GR + V A+
Sbjct: 251 KFIKGRIVHVTYAK 264
Score = 57.0 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 53/83 (63%), Gaps = 2/83 (2%)
Query: 11 EGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIP--RDRFTRESRGFAFVRFFDKRDA 68
EG +L V N++++T D +R+VFE+CG V I + +D+ ++ GF FV + DA
Sbjct: 501 EGSKTLYVKNISFKTKEDVIRKVFEKCGRVLAITLSKTKDKKVEKNSGFGFVEYAKHEDA 560
Query: 69 EDALDAMDGRMLDGRELRVQMAR 91
+A+ + G+++DG +++++++
Sbjct: 561 INAIKTLQGKVIDGHAVQIEISQ 583
Score = 40.0 bits (92), Expect = 0.28, Method: Composition-based stats.
Identities = 21/76 (27%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L V N+ + T ++R +F G + + +P+ + +++GFAFV + K++A +A+ A+
Sbjct: 606 LLVKNVPFETNIKEVRELFRTYGTLRGVRLPK-KVDGQNKGFAFVEYATKQEAANAMAAL 664
Query: 76 DGRMLDGRELRVQMAR 91
GR L ++ A+
Sbjct: 665 KNSHFYGRHLIIEYAK 680
Score = 35.4 bits (80), Expect = 7.4, Method: Composition-based stats.
Identities = 22/79 (27%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 13 MVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDAL 72
M + + NL R L++ FE+ G + D + R SR F F+ F ++ A+ A+
Sbjct: 1 MSRIIIKNLPERADEKILKQQFEKFGGITDCKVMRTP-QGNSRKFGFIGFENEDQAQTAI 59
Query: 73 DAMDGRMLDGRELRVQMAR 91
M+G + +L+V +A+
Sbjct: 60 TKMNGAYIQSSKLQVSLAK 78
>gi|313235350|emb|CBY19695.1| unnamed protein product [Oikopleura dioica]
Length = 208
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
S+ V + Y TT ++L + F CG + + I D+F+ +GFA++ F +K + +L A
Sbjct: 91 SIYVGQVEYATTAEELEQHFHGCGALNRVTIICDKFSGHPKGFAYIEFTEKESVDASL-A 149
Query: 75 MDGRMLDGRELRVQMARYGRPPSSS 99
+DG +L GR+++V R RP SS
Sbjct: 150 LDGSILCGRQIKVMPKRTNRPGVSS 174
>gi|281353092|gb|EFB28676.1| hypothetical protein PANDA_022375 [Ailuropoda melanoleuca]
Length = 152
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 63/121 (52%), Gaps = 7/121 (5%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
S+ V N+ Y T ++L F CG V + I D+F+ +GFA++ F DK +L A
Sbjct: 31 SIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSL-A 89
Query: 75 MDGRMLDGRELRVQMARYGRPPSSSRSRG---GRDRDRRRDRSRSRDRRYTRSRSFSSRS 131
+D + GR+++V R RP S+ RG R R R + + SR R Y+ F+SR
Sbjct: 90 LDESLFRGRQIKVIPKRTNRPGISTTDRGFPRARYRARTTNYNSSRSRFYS---GFNSRP 146
Query: 132 R 132
R
Sbjct: 147 R 147
>gi|226481272|emb|CAX79101.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
Length = 210
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 53/97 (54%), Gaps = 1/97 (1%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
SL + +L DDLRR F R G + D+ IP D FT +G+AF+ F + RDAEDA
Sbjct: 7 SLYIRHLPDTCRHDDLRRCFGRYGRIVDVTIPLDFFTGRMKGYAFIEFGNPRDAEDAHYY 66
Query: 75 MDGRMLDGRELRVQMAR-YGRPPSSSRSRGGRDRDRR 110
MD GR++ V+ R Y + P+ R + RD R
Sbjct: 67 MDHTRFMGRDIEVEFTRGYRKTPAEMRLKERRDEPHR 103
>gi|119598613|gb|EAW78207.1| splicing factor, arginine/serine-rich 10 (transformer 2 homolog,
Drosophila), isoform CRA_c [Homo sapiens]
Length = 289
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 48/82 (58%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
L V L+ TT DLR VF + G + D+ I D+ +R SRGFAFV F + DA++A +
Sbjct: 118 CCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKE 177
Query: 74 AMDGRMLDGRELRVQMARYGRP 95
+G LDGR +RV + RP
Sbjct: 178 RANGMELDGRRIRVDFSITKRP 199
>gi|56269656|gb|AAH86795.1| Sfrs10 protein [Mus musculus]
Length = 229
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 48/82 (58%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
L V L+ TT DLR VF + G + D+ I D+ +R SRGFAFV F + DA++A +
Sbjct: 118 CCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKE 177
Query: 74 AMDGRMLDGRELRVQMARYGRP 95
+G LDGR +RV + RP
Sbjct: 178 RANGMELDGRRIRVDFSITKRP 199
>gi|113478077|ref|YP_724138.1| RNA-binding region RNP-1 [Trichodesmium erythraeum IMS101]
gi|110169125|gb|ABG53665.1| RNA-binding region RNP-1 [Trichodesmium erythraeum IMS101]
Length = 102
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
+S+ V NL+Y T DDL VF G V + +P DR T RGF FV + + + A++
Sbjct: 1 MSIYVGNLSYDVTQDDLSEVFAEYGTVKRVQLPTDRETGRPRGFGFVEMSSENEEQKAIE 60
Query: 74 AMDGRMLDGRELRVQMARYGRPPSSSRSRGGRDRD 108
A+DG GR+++V A+ P R GG R+
Sbjct: 61 ALDGAEWMGRDIKVNKAK----PREDRGSGGNRRN 91
>gi|335775542|gb|AEH58607.1| transformer-2 protein-like protein beta-like protein [Equus
caballus]
Length = 275
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 48/82 (58%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
L V L+ TT DLR VF + G + D+ I D+ +R SRGFAFV F + DA++A +
Sbjct: 105 CCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKE 164
Query: 74 AMDGRMLDGRELRVQMARYGRP 95
+G LDGR +RV + RP
Sbjct: 165 RANGMELDGRRIRVDFSITKRP 186
>gi|148665209|gb|EDK97625.1| mCG127344, isoform CRA_b [Mus musculus]
gi|417409256|gb|JAA51145.1| Putative ataxin 2-binding protein rrm superfamily, partial
[Desmodus rotundus]
Length = 276
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 48/82 (58%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
L V L+ TT DLR VF + G + D+ I D+ +R SRGFAFV F + DA++A +
Sbjct: 106 CCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKE 165
Query: 74 AMDGRMLDGRELRVQMARYGRP 95
+G LDGR +RV + RP
Sbjct: 166 RANGMELDGRRIRVDFSITKRP 187
>gi|51476162|emb|CAH18071.1| hypothetical protein [Homo sapiens]
Length = 276
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 48/82 (58%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
L V L+ TT DLR VF + G + D+ I D+ +R SRGFAFV F + DA++A +
Sbjct: 106 CCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKE 165
Query: 74 AMDGRMLDGRELRVQMARYGRP 95
+G LDGR +RV + RP
Sbjct: 166 RANGMELDGRRIRVDFSITKRP 187
>gi|334324956|ref|XP_001377181.2| PREDICTED: transformer-2 protein homolog beta-like [Monodelphis
domestica]
Length = 299
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 48/82 (58%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
L V L+ TT DLR VF + G + D+ I D+ +R SRGFAFV F + DA++A +
Sbjct: 129 CCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKE 188
Query: 74 AMDGRMLDGRELRVQMARYGRP 95
+G LDGR +RV + RP
Sbjct: 189 RANGMELDGRRIRVDFSITKRP 210
>gi|226476570|emb|CAX72177.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481290|emb|CAX79110.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481296|emb|CAX79113.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
Length = 210
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 53/97 (54%), Gaps = 1/97 (1%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
SL + +L DDLRR F R G + D+ IP D FT +G+AF+ F + RDAEDA
Sbjct: 7 SLYIRHLPDTCRHDDLRRCFGRYGRIVDVTIPLDFFTGRMKGYAFIEFENPRDAEDAHYY 66
Query: 75 MDGRMLDGRELRVQMAR-YGRPPSSSRSRGGRDRDRR 110
MD GR++ V+ R Y + P+ R + RD R
Sbjct: 67 MDHTRFMGRDIEVEFTRGYRKTPAEMRLKERRDEPHR 103
>gi|452842907|gb|EME44842.1| hypothetical protein DOTSEDRAFT_70785 [Dothistroma septosporum
NZE10]
Length = 337
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 53/90 (58%), Gaps = 4/90 (4%)
Query: 10 IEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAE 69
+ G ++VDNL Y T +DLR +FER G + + DR R S G A+V + D RDA
Sbjct: 96 LPGGTKIRVDNLHYELTEEDLRDLFERIGPTTSVRLLYDRADR-SLGTAYVIYEDPRDAR 154
Query: 70 DALDAMDGRMLDGRELRVQMARYG---RPP 96
A+D +G+M +G+ +R+Q+ G RPP
Sbjct: 155 QAVDDFNGQMANGQPIRLQLMPSGPGPRPP 184
>gi|344339676|ref|ZP_08770604.1| RNP-1 like RNA-binding protein [Thiocapsa marina 5811]
gi|343800412|gb|EGV18358.1| RNP-1 like RNA-binding protein [Thiocapsa marina 5811]
Length = 91
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 53/92 (57%), Gaps = 4/92 (4%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
+ V NLTY T DDLR VF + GE+ + +D+F+ +S+GF FV + +A+ A+ A+
Sbjct: 3 IYVGNLTYSVTDDDLRDVFGQYGELAAAEVIKDKFSGQSKGFGFVDMPNNSEADAAIKAL 62
Query: 76 DGRMLDGRELRVQMARYGRPPSSSRSRGGRDR 107
+ GR+L V AR P + R RGG R
Sbjct: 63 NETDFKGRKLTVNEAR----PRAERPRGGGGR 90
>gi|225677904|gb|EEH16188.1| hypothetical protein PABG_06275 [Paracoccidioides brasiliensis
Pb03]
Length = 308
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 48/81 (59%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
+L V + R T D+ R+FE+ G+V + I D T+ESRGF FV+ A+ A +
Sbjct: 73 NLFVTGIHPRLTESDVSRLFEKYGDVENCSIMLDPHTKESRGFGFVKMVTAEQADAAKEG 132
Query: 75 MDGRMLDGRELRVQMARYGRP 95
+ G +++GR L ++ AR GRP
Sbjct: 133 LQGEVIEGRTLSIEKARRGRP 153
>gi|29841102|gb|AAP06115.1| similar to NM_080743 serine-arginine repressor protein (35 kDa) in
Homo sapiens [Schistosoma japonicum]
gi|226476576|emb|CAX72180.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481266|emb|CAX79098.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481268|emb|CAX79099.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481270|emb|CAX79100.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481274|emb|CAX79102.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481276|emb|CAX79103.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481278|emb|CAX79104.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481280|emb|CAX79105.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481282|emb|CAX79106.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481284|emb|CAX79107.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481286|emb|CAX79108.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481288|emb|CAX79109.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481292|emb|CAX79111.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481294|emb|CAX79112.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481300|emb|CAX79114.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481699|emb|CAX79115.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481701|emb|CAX79116.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
Length = 210
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 53/97 (54%), Gaps = 1/97 (1%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
SL + +L DDLRR F R G + D+ IP D FT +G+AF+ F + RDAEDA
Sbjct: 7 SLYIRHLPDTCRHDDLRRCFGRYGRIVDVTIPLDFFTGRMKGYAFIEFENPRDAEDAHYY 66
Query: 75 MDGRMLDGRELRVQMAR-YGRPPSSSRSRGGRDRDRR 110
MD GR++ V+ R Y + P+ R + RD R
Sbjct: 67 MDHTRFMGRDIEVEFTRGYRKTPAEMRLKERRDEPHR 103
>gi|390439660|ref|ZP_10228043.1| putative RNA-binding protein rbpF [Microcystis sp. T1-4]
gi|389836940|emb|CCI32167.1| putative RNA-binding protein rbpF [Microcystis sp. T1-4]
Length = 97
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 54/97 (55%), Gaps = 1/97 (1%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
+S+ V NL + +D+ VF G++ +++P DR T++ RGFAFV A+
Sbjct: 1 MSIYVGNLPFEVNQEDVVEVFTEYGKIKRVHLPIDRETKKKRGFAFVEMETPAQESAAIA 60
Query: 74 AMDGRMLDGRELRVQMARYGRPPSSSRSRGGRDRDRR 110
A++G GREL+V AR + P S + G R RDRR
Sbjct: 61 ALNGAEWMGRELKVNQARE-KEPRPSFAGGDRGRDRR 96
>gi|313247139|emb|CBY35961.1| unnamed protein product [Oikopleura dioica]
Length = 208
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
S+ V + Y TT ++L + F CG + + I D+F+ +GFA++ F +K + +L A
Sbjct: 91 SIYVGQVEYATTAEELEQHFHGCGALNRVTIICDKFSGHPKGFAYIEFTEKESVDASL-A 149
Query: 75 MDGRMLDGRELRVQMARYGRPPSSS 99
+DG +L GR+++V R RP SS
Sbjct: 150 LDGSILCGRQIKVMPKRTNRPGVSS 174
>gi|256076749|ref|XP_002574672.1| serine/arginine rich splicing factor [Schistosoma mansoni]
gi|360045341|emb|CCD82889.1| putative serine/arginine rich splicing factor [Schistosoma mansoni]
Length = 210
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 53/97 (54%), Gaps = 1/97 (1%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
SL + +L DDLRR F R G + D+ IP D FT +G+AF+ F + RDAEDA
Sbjct: 7 SLYIRHLPDTCRHDDLRRCFGRYGRIVDVTIPLDFFTGRMKGYAFIEFENPRDAEDAHYY 66
Query: 75 MDGRMLDGRELRVQMAR-YGRPPSSSRSRGGRDRDRR 110
MD GR++ V+ R Y + P+ R + RD R
Sbjct: 67 MDHTRFMGRDIEVEFTRGYRKTPAEMRLKERRDEPHR 103
>gi|428210291|ref|YP_007094644.1| RNP-1 like RNA-binding protein [Chroococcidiopsis thermalis PCC
7203]
gi|428012212|gb|AFY90775.1| RNP-1 like RNA-binding protein [Chroococcidiopsis thermalis PCC
7203]
Length = 101
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
+S+ V NL+Y TP+DL F + G V + +P DR T RGFAFV + A+D
Sbjct: 1 MSIYVGNLSYEVTPEDLSAAFAQYGSVKRVQLPTDRETGRVRGFAFVEMDTDAEETTAID 60
Query: 74 AMDGRMLDGRELRVQMAR 91
A+DG GR ++V A+
Sbjct: 61 ALDGAEWMGRNMKVNKAK 78
>gi|226287356|gb|EEH42869.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
Length = 305
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 48/81 (59%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
+L V + R T D+ R+FE+ G+V + I D T+ESRGF FV+ A+ A +
Sbjct: 70 NLFVTGIHPRLTESDVSRLFEKYGDVENCSIMLDPHTKESRGFGFVKMVTAEQADAAKEG 129
Query: 75 MDGRMLDGRELRVQMARYGRP 95
+ G +++GR L ++ AR GRP
Sbjct: 130 LQGEVIEGRTLSIEKARRGRP 150
>gi|338716139|ref|XP_003363400.1| PREDICTED: transformer-2 protein homolog beta-like isoform 2 [Equus
caballus]
Length = 254
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 48/82 (58%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
L V L+ TT DLR VF + G + D+ I D+ +R SRGFAFV F + DA++A +
Sbjct: 84 CCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKE 143
Query: 74 AMDGRMLDGRELRVQMARYGRP 95
+G LDGR +RV + RP
Sbjct: 144 RANGMELDGRRIRVDFSITKRP 165
>gi|384252135|gb|EIE25612.1| hypothetical protein COCSUDRAFT_83619, partial [Coccomyxa
subellipsoidea C-169]
Length = 207
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 45/78 (57%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
++ V NL + T+ LR FE G V + + T S+GF FV+F D RDAEDA+
Sbjct: 36 TIFVGNLNHETSERRLREFFEEYGRVLSTKVVFNPETGRSKGFGFVKFDDARDAEDAIKQ 95
Query: 75 MDGRMLDGRELRVQMARY 92
DG+ +DGR ++ A+Y
Sbjct: 96 ADGQTMDGRTIKCNFAKY 113
>gi|21758154|dbj|BAC05256.1| unnamed protein product [Homo sapiens]
Length = 252
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 48/82 (58%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
L V L+ TT DLR VF + G + D+ I D+ +R SRGFAFV F + DA++A +
Sbjct: 82 CCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKE 141
Query: 74 AMDGRMLDGRELRVQMARYGRP 95
+G LDGR +RV + RP
Sbjct: 142 RANGMELDGRRIRVDFSITKRP 163
>gi|449018190|dbj|BAM81592.1| probable RNA binding protein Mrd1p [Cyanidioschyzon merolae strain
10D]
Length = 815
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 44/70 (62%)
Query: 18 VDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAMDG 77
+ NL + T +DL ++ E GE+ D+++ RDR + +SRGF F RF A+ A+DA+DG
Sbjct: 316 IRNLGFNVTFEDLEKLLEPFGELEDVHLVRDRESGQSRGFGFARFKTVTSAQQAMDALDG 375
Query: 78 RMLDGRELRV 87
+ GR L +
Sbjct: 376 SVYQGRLLHI 385
>gi|345321135|ref|XP_003430388.1| PREDICTED: polyadenylate-binding protein 2-like isoform 2
[Ornithorhynchus anatinus]
Length = 338
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 63/121 (52%), Gaps = 7/121 (5%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
S+ V N+ Y T ++L F CG V + I D+F+ +GFA++ F DK ++ A
Sbjct: 205 SIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSM-A 263
Query: 75 MDGRMLDGRELRVQMARYGRPPSSSRSRG---GRDRDRRRDRSRSRDRRYTRSRSFSSRS 131
+D + GR+++V R RP S+ RG R R R + S SR R Y+ F+SR
Sbjct: 264 LDESLFRGRQIKVIPKRTNRPGISTTDRGFPRARFRARATNYSSSRARFYS---GFNSRP 320
Query: 132 R 132
R
Sbjct: 321 R 321
>gi|434399674|ref|YP_007133678.1| RNP-1 like RNA-binding protein [Stanieria cyanosphaera PCC 7437]
gi|428270771|gb|AFZ36712.1| RNP-1 like RNA-binding protein [Stanieria cyanosphaera PCC 7437]
Length = 94
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 50/97 (51%), Gaps = 4/97 (4%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
+S+ V NL Y + DL VF G V +++P DR T RGFAFV + + A+
Sbjct: 1 MSIYVGNLDYEISQQDLEEVFTEYGTVKRVHLPTDRETGRKRGFAFVEMGTEAEEASAIS 60
Query: 74 AMDGRMLDGRELRVQMARYGRPPSSSRSRGGRDRDRR 110
A+DG GR L+V AR P R+ GG R+ R
Sbjct: 61 ALDGAEWMGRSLKVNQAR----PREQRNSGGNRRNFR 93
>gi|425466928|ref|ZP_18846222.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9809]
gi|389830427|emb|CCI27639.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9809]
Length = 97
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 55/97 (56%), Gaps = 1/97 (1%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
+S+ V NL+Y + +DL VF+ G+V ++IP D+ T RGFAFV K A++
Sbjct: 1 MSIFVGNLSYEISQEDLVDVFKEYGKVQRVHIPVDKETGRKRGFAFVEMESKAQETTAIE 60
Query: 74 AMDGRMLDGRELRVQMARYGRPPSSSRSRGGRDRDRR 110
A+DG GR ++V AR R + + GG DR +R
Sbjct: 61 ALDGAEWMGRSIKVNQARE-REERAPFNGGGGDRKKR 96
>gi|348582426|ref|XP_003476977.1| PREDICTED: transformer-2 protein homolog beta-like [Cavia
porcellus]
Length = 337
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 48/82 (58%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
L V L+ TT DLR VF + G + D+ I D+ +R SRGFAFV F + DA++A +
Sbjct: 164 CCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKE 223
Query: 74 AMDGRMLDGRELRVQMARYGRP 95
+G LDGR +RV + RP
Sbjct: 224 RANGMELDGRRIRVDFSITKRP 245
>gi|56755711|gb|AAW26034.1| SJCHGC01826 protein [Schistosoma japonicum]
Length = 220
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 59/114 (51%), Gaps = 7/114 (6%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L + L +DL R +CGEV D+++ R+ GFAF + DAE A+ ++
Sbjct: 12 LYIGGLVENVLKEDLVRELSKCGEVVDVWVARN-----PPGFAFAEYVKSSDAEKAVRSL 66
Query: 76 DGRMLDGRELRVQMARYGRPPSSSRS--RGGRDRDRRRDRSRSRDRRYTRSRSF 127
DG + G +RV+ A GR S+ RS RGGR R R R+ RR R+ S+
Sbjct: 67 DGVNVCGSRIRVEFAHGGRSKSAVRSAFRGGRPVGRGSLRRRNSPRRNGRNSSY 120
>gi|384500196|gb|EIE90687.1| hypothetical protein RO3G_15398 [Rhizopus delemar RA 99-880]
Length = 213
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 45/76 (59%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
++ NL Y D+ +FER G + I +P D T +++GFAFV F D++DAEDA +
Sbjct: 138 TTIYAGNLPYDFIERDVATMFERYGRLKSITVPLDTVTNKNKGFAFVEFEDRQDAEDAFE 197
Query: 74 AMDGRMLDGRELRVQM 89
DG ++GR LR+
Sbjct: 198 KFDGFSVEGRRLRLDW 213
>gi|354568550|ref|ZP_08987714.1| RNP-1 like RNA-binding protein [Fischerella sp. JSC-11]
gi|353540273|gb|EHC09750.1| RNP-1 like RNA-binding protein [Fischerella sp. JSC-11]
Length = 106
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 46/78 (58%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
+S+ V NL+Y+ +DLR VF G V + +P DR T RGFAFV + E A++
Sbjct: 1 MSIYVGNLSYQVREEDLREVFAEYGTVKKVQLPTDRDTGRVRGFAFVEMQSDEEEERAIE 60
Query: 74 AMDGRMLDGRELRVQMAR 91
A+DG GR+L+V AR
Sbjct: 61 ALDGAEWMGRDLKVNKAR 78
>gi|298490385|ref|YP_003720562.1| RNP-1 like RNA-binding protein ['Nostoc azollae' 0708]
gi|298232303|gb|ADI63439.1| RNP-1 like RNA-binding protein ['Nostoc azollae' 0708]
Length = 99
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 55/105 (52%), Gaps = 7/105 (6%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
+++ V NL+YR T DL+ VF GEV + +P +R T RGFAFV + + A+
Sbjct: 1 MTIYVGNLSYRATEADLKAVFADYGEVKRVVLPTERETGRMRGFAFVEMLEDAQEDAAIT 60
Query: 74 AMDGRMLDGRELRVQMARYGRPPSSSRSRGGRDRDRRRDRSRSRD 118
+DG GR++RV A+ R GRD RR SR +D
Sbjct: 61 ELDGAEWMGRQVRVNKAK-------PREDNGRDDSRRGSWSRKQD 98
>gi|218200448|gb|EEC82875.1| hypothetical protein OsI_27755 [Oryza sativa Indica Group]
Length = 141
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 45/82 (54%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
+L + L+ RTT D L+ F + GEV + DR T S+GF F+R+ DA ++
Sbjct: 37 NLFISGLSKRTTTDGLKEAFAKFGEVIHARVVTDRVTGFSKGFGFIRYATVEDAAKGIEG 96
Query: 75 MDGRMLDGRELRVQMARYGRPP 96
MDG+ LDG + + AR PP
Sbjct: 97 MDGKFLDGWVIFAEYARPRTPP 118
>gi|348680240|gb|EGZ20056.1| hypothetical protein PHYSODRAFT_354260 [Phytophthora sojae]
Length = 251
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFER-CGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDAL 72
+SL V NL+ TT D+LRR F R G++ D+YIP++ + RGFAF+ F D R D
Sbjct: 81 ISLLVRNLSPETTQDELRRAFSRRAGDILDVYIPKEYNSNRPRGFAFIEFADSRVGRDIK 140
Query: 73 DAMDGRMLDGRELRVQMARYGR 94
MD L RE+ V A+ R
Sbjct: 141 FEMDRTQLGDREIAVLFAKQHR 162
>gi|1395193|dbj|BAA12064.1| RNA-binding protein RZ-1 [Nicotiana sylvestris]
gi|1435062|dbj|BAA06012.1| RNA binding protein RZ-1 [Nicotiana sylvestris]
Length = 209
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 48/74 (64%)
Query: 18 VDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAMDG 77
+ NL++ T+ L+ FE+ G + D + D+F+ SRGF FV F +KR EDA++AM+G
Sbjct: 10 IGNLSWSTSDRGLKDAFEKFGNLVDAKVVLDKFSGRSRGFGFVTFDEKRAMEDAIEAMNG 69
Query: 78 RMLDGRELRVQMAR 91
LDGR++ V A+
Sbjct: 70 VDLDGRDITVDKAQ 83
>gi|443312655|ref|ZP_21042271.1| RRM domain-containing RNA-binding protein [Synechocystis sp. PCC
7509]
gi|442777374|gb|ELR87651.1| RRM domain-containing RNA-binding protein [Synechocystis sp. PCC
7509]
Length = 96
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
+++ V NL+YR T +DLR VF G + I +P DR T RGFAFV + + A+
Sbjct: 1 MTIYVGNLSYRATEEDLRTVFAEYGAIKRIVLPTDRETGRLRGFAFVDMNEDAQEDTAIT 60
Query: 74 AMDGRMLDGRELRVQMARYGRPPSSSRSRGG 104
+DG GR+LRV A +P +R GG
Sbjct: 61 ELDGAEWMGRQLRVNKA---KPKEDNRREGG 88
>gi|387913868|gb|AFK10543.1| cold-inducible RNA-binding protein-like protein [Callorhinchus
milii]
Length = 178
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 45/75 (60%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L V + + T L VF + G+V ++ + R+R T+ S+G FV F + DA DAL M
Sbjct: 7 LFVGGINFETDEQTLEEVFAKYGDVSEVIVIRERDTQRSKGLGFVTFENPDDARDALAGM 66
Query: 76 DGRMLDGRELRVQMA 90
+G+ +DGR++RV A
Sbjct: 67 NGKTVDGRQIRVDHA 81
>gi|434395314|ref|YP_007130261.1| RNP-1 like RNA-binding protein [Gloeocapsa sp. PCC 7428]
gi|428267155|gb|AFZ33101.1| RNP-1 like RNA-binding protein [Gloeocapsa sp. PCC 7428]
Length = 96
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 45/78 (57%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
+++ V NL+YR T DDLR VF G V I +P DR T RGFAFV + + A+
Sbjct: 1 MTIYVGNLSYRATEDDLRAVFAEYGTVKRIVLPTDRETGRMRGFAFVDMTEDAQEDAAIT 60
Query: 74 AMDGRMLDGRELRVQMAR 91
+DG GR+LRV A+
Sbjct: 61 ELDGAEWMGRQLRVNKAK 78
>gi|345313298|ref|XP_001514404.2| PREDICTED: transformer-2 protein homolog beta-like [Ornithorhynchus
anatinus]
Length = 478
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 48/82 (58%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
L V L+ TT DLR VF + G + D+ I D+ +R SRGFAFV F + DA++A +
Sbjct: 220 CCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKE 279
Query: 74 AMDGRMLDGRELRVQMARYGRP 95
+G LDGR +RV + RP
Sbjct: 280 RANGMELDGRRIRVDFSITKRP 301
>gi|425459045|ref|ZP_18838531.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9808]
gi|389823285|emb|CCI28615.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9808]
Length = 97
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 55/97 (56%), Gaps = 1/97 (1%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
+S+ V NL+Y + DDL VF+ G V +YIP DR T RGFAFV+ +K A+
Sbjct: 1 MSIFVGNLSYEISEDDLTDVFKDYGIVQRVYIPVDRDTGRKRGFAFVQMENKDQETKAIA 60
Query: 74 AMDGRMLDGRELRVQMARYGRPPSSSRSRGGRDRDRR 110
A+DG GR ++V AR R + + GG DR +R
Sbjct: 61 ALDGAEWMGRSIKVNEARE-REERAPFNGGGGDRKKR 96
>gi|440636081|gb|ELR06000.1| hypothetical protein GMDG_01961 [Geomyces destructans 20631-21]
Length = 307
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 54/96 (56%), Gaps = 4/96 (4%)
Query: 4 GRPPPRIEGMVS----LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAF 59
G PPP+ +G V+ L V + R + ++ R+FE+ GEV I D T+ESRGF F
Sbjct: 65 GGPPPQDDGAVNPGSNLFVTGIHPRLSEAEVTRLFEKYGEVEKCQIMLDPHTKESRGFGF 124
Query: 60 VRFFDKRDAEDALDAMDGRMLDGRELRVQMARYGRP 95
V+ A+ A + + G +++GR L ++ AR RP
Sbjct: 125 VKMVTADQADAAKEGLQGEVIEGRTLSIEKARRSRP 160
>gi|226481705|emb|CAX79118.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
Length = 210
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 53/97 (54%), Gaps = 1/97 (1%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
SL + +L DDLRR F R G + D+ IP D FT +G+AF+ F + RDAEDA
Sbjct: 7 SLYIRHLPDTCRHDDLRRCFGRYGRIVDVTIPLDFFTGRMKGYAFIEFENPRDAEDAHYY 66
Query: 75 MDGRMLDGRELRVQMAR-YGRPPSSSRSRGGRDRDRR 110
MD GR++ V+ R Y + P+ R + RD R
Sbjct: 67 MDHTRFMGRDIEVEFTRGYRKTPAEMRLKERRDEPHR 103
>gi|320163510|gb|EFW40409.1| Snrp70 protein [Capsaspora owczarzaki ATCC 30864]
Length = 320
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 46/77 (59%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
+L + NL+Y TT + L+R E G + I+I R+ T + RG+AFV F +RD +DA
Sbjct: 105 TLFISNLSYDTTEESLKREMEEYGSIKQIHIVRNTQTSKPRGYAFVEFEHERDMKDAYKQ 164
Query: 75 MDGRMLDGRELRVQMAR 91
DGR +DGR + V R
Sbjct: 165 ADGRKVDGRRIVVDFER 181
>gi|291407441|ref|XP_002719942.1| PREDICTED: RNA binding motif protein 3 [Oryctolagus cuniculus]
Length = 155
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 58/113 (51%), Gaps = 7/113 (6%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L + L + T L F G + ++ + +DR T+ SRGF F+ F + A DA+ AM
Sbjct: 8 LFIGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRAM 67
Query: 76 DGRMLDGRELRVQMARYGRPPSSSRSRGGRDRDRRRDRSRSR---DRRYTRSR 125
+G LDGR++RV A S+ +RGG R RS SR D+ Y SR
Sbjct: 68 NGESLDGRQIRVDHA----GKSARGTRGGAFGAHGRGRSYSRGGGDQGYGSSR 116
>gi|449266970|gb|EMC77948.1| Transformer-2 like protein beta, partial [Columba livia]
Length = 156
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 48/82 (58%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
L V L+ TT DLR VF + G + D+ I D+ +R SRGFAFV F + DA++A +
Sbjct: 62 CCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVEDAKEAKE 121
Query: 74 AMDGRMLDGRELRVQMARYGRP 95
+G LDGR +RV + RP
Sbjct: 122 RANGMELDGRRIRVDFSITKRP 143
>gi|432877561|ref|XP_004073160.1| PREDICTED: RNA-binding motif protein, X chromosome-like isoform 2
[Oryzias latipes]
Length = 380
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 54/97 (55%), Gaps = 9/97 (9%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L + L TT L + F + G + ++ + +DR T +SRGFAFV F DA+DA M
Sbjct: 10 LFIGGLNTETTEKALEQYFSKYGRIVEVILMKDRETNKSRGFAFVTFESPADAKDAAREM 69
Query: 76 DGRMLDGRELRVQMA---------RYGRPPSSSRSRG 103
+G+ LDG+ ++V+ A R G P + SRSRG
Sbjct: 70 NGKSLDGKPIKVEQATKPQFESAGRRGPPSNYSRSRG 106
>gi|407039238|gb|EKE39532.1| RNA recognition motif domain containing protein [Entamoeba nuttalli
P19]
Length = 697
Score = 62.4 bits (150), Expect = 6e-08, Method: Composition-based stats.
Identities = 28/74 (37%), Positives = 47/74 (63%)
Query: 18 VDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAMDG 77
+ NL + T DD+R+ F+R G + +I++P D+ T++S+GF FV F +DA A + MD
Sbjct: 190 ITNLPFNCTEDDIRKEFDRFGNIAEIHLPIDKITKKSKGFGFVLFVVPQDAVKACNEMDN 249
Query: 78 RMLDGRELRVQMAR 91
+ + GR + V A+
Sbjct: 250 KFIKGRIVHVTYAK 263
Score = 55.8 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 53/83 (63%), Gaps = 2/83 (2%)
Query: 11 EGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIP--RDRFTRESRGFAFVRFFDKRDA 68
EG +L V N++++T D +R+VFE+CG V + + +D+ ++ GF FV + DA
Sbjct: 513 EGSKTLYVKNISFKTKEDVIRKVFEKCGRVLAVTLSKTKDKKVEKNSGFGFVEYAKHEDA 572
Query: 69 EDALDAMDGRMLDGRELRVQMAR 91
+A+ + G+++DG +++++++
Sbjct: 573 INAIKTLQGKVIDGHAVQIEISQ 595
Score = 40.0 bits (92), Expect = 0.34, Method: Composition-based stats.
Identities = 21/76 (27%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L V N+ + T ++R +F G + + +P+ + +++GFAFV + K++A +A+ A+
Sbjct: 618 LLVKNVPFETNIKEVRELFRTYGTLRGVRLPK-KVDGQNKGFAFVEYATKQEAANAMAAL 676
Query: 76 DGRMLDGRELRVQMAR 91
GR L ++ A+
Sbjct: 677 KNSHFYGRHLIIEYAK 692
Score = 35.4 bits (80), Expect = 8.8, Method: Composition-based stats.
Identities = 22/79 (27%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 13 MVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDAL 72
M + + NL R L++ FE+ G + D + R SR F F+ F ++ A+ A+
Sbjct: 1 MSRIIIKNLPERADEKILKQQFEKFGGITDCKVMRTP-QGNSRKFGFIGFENEDQAQTAI 59
Query: 73 DAMDGRMLDGRELRVQMAR 91
M+G + +L+V +A+
Sbjct: 60 TKMNGAYIQSSKLQVSLAK 78
>gi|340914863|gb|EGS18204.1| hypothetical protein CTHT_0062190 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 344
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 46/81 (56%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
+L V + R ++ R+FE+ GEV I RD T ESRGF FV+ AE A++
Sbjct: 73 NLFVTGIHPRLEESEITRLFEKYGEVEKCQIMRDPHTGESRGFGFVKMMTSEQAEAAMEG 132
Query: 75 MDGRMLDGRELRVQMARYGRP 95
+ G +++GR L ++ AR RP
Sbjct: 133 LKGEIIEGRTLNIEKARRSRP 153
>gi|326911410|ref|XP_003202052.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1-like [Meleagris gallopavo]
Length = 216
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 53/90 (58%), Gaps = 4/90 (4%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MS G P + ++ V NL + T +DL R+F + G+V + I +D+ TR+S+G AF+
Sbjct: 1 MSGGLAPSK----STVYVSNLPFALTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFI 56
Query: 61 RFFDKRDAEDALDAMDGRMLDGRELRVQMA 90
F DK A++ A++ + L GR ++ +A
Sbjct: 57 LFLDKESAQNCSRALNNKQLFGRVIKASIA 86
>gi|443319940|ref|ZP_21049081.1| RRM domain-containing RNA-binding protein [Gloeocapsa sp. PCC
73106]
gi|442790348|gb|ELR99940.1| RRM domain-containing RNA-binding protein [Gloeocapsa sp. PCC
73106]
Length = 98
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 56/100 (56%), Gaps = 6/100 (6%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
+S+ V NL+Y T ++L+ VFE G+V +Y+P D T + RGF FV + A++
Sbjct: 1 MSIYVGNLSYNVTQEELKEVFEDYGKVKRVYLPTDPETGKLRGFGFVEMETDEQEDAAIE 60
Query: 74 AMDGRMLDGRELRVQMARYGRPPSSSR--SRGGRDRDRRR 111
+DG GRE+RV A+ P +R S GG +R RR
Sbjct: 61 TLDGAEWMGREMRVNKAK----PRENRGDSGGGGNRKIRR 96
>gi|50728210|ref|XP_416034.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1 [Gallus gallus]
Length = 216
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 53/90 (58%), Gaps = 4/90 (4%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MS G P + ++ V NL + T +DL R+F + G+V + I +D+ TR+S+G AF+
Sbjct: 1 MSGGLAPSK----STVYVSNLPFALTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFI 56
Query: 61 RFFDKRDAEDALDAMDGRMLDGRELRVQMA 90
F DK A++ A++ + L GR ++ +A
Sbjct: 57 LFLDKESAQNCSRALNNKQLFGRVIKASIA 86
>gi|254424963|ref|ZP_05038681.1| RNA-binding protein, putative [Synechococcus sp. PCC 7335]
gi|196192452|gb|EDX87416.1| RNA-binding protein, putative [Synechococcus sp. PCC 7335]
Length = 92
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 51/93 (54%), Gaps = 1/93 (1%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
+S+ V NL+Y +DL VF G V I +P DR T RGFAFV + E A++
Sbjct: 1 MSIYVGNLSYSAKEEDLEGVFGEYGTVKRITLPTDRETGRPRGFAFVEMEEDATEEKAIE 60
Query: 74 AMDGRMLDGRELRVQMARYGRPPSSSRSRGGRD 106
A+DG GRELRV A+ R P + S GG +
Sbjct: 61 ALDGAEWMGRELRVNKAK-PREPRNRPSGGGWN 92
>gi|62087996|dbj|BAD92445.1| splicing factor, arginine/serine-rich 10 (transformer 2 homolog,
Drosophila) variant [Homo sapiens]
Length = 278
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 48/82 (58%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
L V L+ TT DLR VF + G + D+ I D+ +R SRGFAFV F + DA++A +
Sbjct: 106 CCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKE 165
Query: 74 AMDGRMLDGRELRVQMARYGRP 95
+G LDGR +RV + RP
Sbjct: 166 RANGMELDGRRIRVDFSITKRP 187
>gi|197100753|ref|NP_001125414.1| transformer-2 protein homolog beta [Pongo abelii]
gi|55727979|emb|CAH90742.1| hypothetical protein [Pongo abelii]
Length = 288
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 48/82 (58%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
L V L+ TT DLR VF + G + D+ I D+ +R SRGFAFV F + DA++A +
Sbjct: 118 CCLGVFGLSSYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKE 177
Query: 74 AMDGRMLDGRELRVQMARYGRP 95
+G LDGR +RV + RP
Sbjct: 178 RANGMELDGRRIRVDFSITKRP 199
>gi|47229936|emb|CAG10350.1| unnamed protein product [Tetraodon nigroviridis]
Length = 243
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 59/114 (51%), Gaps = 6/114 (5%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L V L+ TT DLR VF + G + D+ I D+ +R SRGFAFV F + D+++A +
Sbjct: 82 LGVFGLSLYTTERDLREVFSKYGPLADVNIVYDQQSRRSRGFAFVYFENSEDSKEAKEHA 141
Query: 76 DGRMLDGRELRV--QMARYGRPPSSSRSRG----GRDRDRRRDRSRSRDRRYTR 123
+G LDGR +RV + + P+ G G R RD R DR Y R
Sbjct: 142 NGMELDGRRIRVDYSITKRAHTPTPGIYMGRPTYGSSRQSSRDYYRGYDRGYDR 195
>gi|395545949|ref|XP_003774858.1| PREDICTED: uncharacterized protein LOC100927808 [Sarcophilus
harrisii]
Length = 442
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 48/82 (58%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
L V L+ TT DLR++F + G + + I D+ +R SRGFAFV F + +A+ A +
Sbjct: 290 CCLGVFGLSLYTTERDLRQIFTKYGPISHVSIVYDQQSRRSRGFAFVYFENVEEAKKAKE 349
Query: 74 AMDGRMLDGRELRVQMARYGRP 95
+DG LDGR +RV + RP
Sbjct: 350 RVDGIELDGRRIRVDFSITKRP 371
>gi|411118097|ref|ZP_11390478.1| RRM domain-containing RNA-binding protein [Oscillatoriales
cyanobacterium JSC-12]
gi|410711821|gb|EKQ69327.1| RRM domain-containing RNA-binding protein [Oscillatoriales
cyanobacterium JSC-12]
Length = 100
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 45/78 (57%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
+S+ V NL+Y T DDL + F G V + +P DR T RGFAFV + + A++
Sbjct: 1 MSIYVGNLSYNVTSDDLTQTFAEYGTVKRVQLPTDRETGRLRGFAFVEMETDAEEDKAIE 60
Query: 74 AMDGRMLDGRELRVQMAR 91
A+DG GR+L+V AR
Sbjct: 61 ALDGAEWMGRDLKVNKAR 78
>gi|428777010|ref|YP_007168797.1| RNP-1 like RNA-binding protein [Halothece sp. PCC 7418]
gi|428691289|gb|AFZ44583.1| RNP-1 like RNA-binding protein [Halothece sp. PCC 7418]
Length = 90
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 51/90 (56%), Gaps = 1/90 (1%)
Query: 21 LTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAMDGRML 80
+ Y T ++ VF G V + IP DR T + RGF FV + D A++A+DG
Sbjct: 1 MPYEVTEQEVNEVFSEYGTVKRVTIPVDRETGKVRGFGFVEMETESDEAPAIEALDGAEW 60
Query: 81 DGRELRVQMARYGRPPSSSRSRGGRDRDRR 110
GR+LRV AR R +++R+RGGR R+ R
Sbjct: 61 MGRQLRVNKAR-PRQENNNRNRGGRSRENR 89
>gi|358367775|dbj|GAA84393.1| glycine-rich RNA-binding protein [Aspergillus kawachii IFO 4308]
Length = 117
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 46/83 (55%)
Query: 13 MVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDAL 72
M L + L + TT D LR F + G + + + +D T SRGF FVRF +A+ A+
Sbjct: 1 MSKLFIGGLAWHTTDDTLREGFSQYGTIEEAIVVKDHDTHRSRGFGFVRFASDAEADAAM 60
Query: 73 DAMDGRMLDGRELRVQMARYGRP 95
+AM+ + DGR +RV A RP
Sbjct: 61 NAMNNQEFDGRVIRVDKASESRP 83
>gi|432877559|ref|XP_004073159.1| PREDICTED: RNA-binding motif protein, X chromosome-like isoform 1
[Oryzias latipes]
Length = 386
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 54/97 (55%), Gaps = 9/97 (9%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L + L TT L + F + G + ++ + +DR T +SRGFAFV F DA+DA M
Sbjct: 10 LFIGGLNTETTEKALEQYFSKYGRIVEVILMKDRETNKSRGFAFVTFESPADAKDAAREM 69
Query: 76 DGRMLDGRELRVQMA---------RYGRPPSSSRSRG 103
+G+ LDG+ ++V+ A R G P + SRSRG
Sbjct: 70 NGKSLDGKPIKVEQATKPQFESAGRRGPPSNYSRSRG 106
>gi|261855638|ref|YP_003262921.1| RNP-1 like RNA-binding protein [Halothiobacillus neapolitanus c2]
gi|261836107|gb|ACX95874.1| RNP-1 like RNA-binding protein [Halothiobacillus neapolitanus c2]
Length = 98
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 56/103 (54%), Gaps = 6/103 (5%)
Query: 13 MVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDAL 72
M+++ V NL+Y++ D+R FE GEV + +D T S+GFAFV DK A+
Sbjct: 1 MINIYVGNLSYQSGDADVRSAFEAFGEVKSAKVIQDMATGRSKGFAFVEMADKAAGMTAI 60
Query: 73 DAMDGRMLDGRELRVQMARYGRPPSSSRSRGGRDRDRRRDRSR 115
+ +D L+GR +RV A RP + RGG DR RSR
Sbjct: 61 EQLDNTDLNGRNIRVNEA---RPRERTNDRGG---DRGEFRSR 97
>gi|242823058|ref|XP_002488014.1| glycine-rich RNA-binding protein, putative [Talaromyces
stipitatus ATCC 10500]
gi|218712935|gb|EED12360.1| glycine-rich RNA-binding protein, putative [Talaromyces
stipitatus ATCC 10500]
Length = 134
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 45/75 (60%)
Query: 13 MVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDAL 72
M L + L + TT D LR+ FE+ G + + + +DR T SRGF FVRF +A+ A+
Sbjct: 1 MSKLFIGGLAWHTTDDTLRQGFEKFGTIEEAIVIKDRDTNRSRGFGFVRFATDAEADAAI 60
Query: 73 DAMDGRMLDGRELRV 87
D M+ + DGR +RV
Sbjct: 61 DGMNNQEFDGRVIRV 75
>gi|157311739|ref|NP_001098602.1| polyadenylate-binding protein nuclear 1 isoform 2 [Danio rerio]
gi|166158019|ref|NP_001107419.1| uncharacterized protein LOC100135259 [Xenopus (Silurana)
tropicalis]
gi|156914711|gb|AAI52624.1| Pabpn1 protein [Danio rerio]
gi|158253845|gb|AAI54029.1| Poly(A) binding protein, nuclear 1 [Danio rerio]
gi|163915712|gb|AAI57544.1| LOC100135259 protein [Xenopus (Silurana) tropicalis]
Length = 232
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 62/126 (49%), Gaps = 14/126 (11%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
S+ V N+ Y T ++L F CG V + I D+FT +GFA++ F DK A+ A
Sbjct: 99 SIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFTGHPKGFAYIEFADKESVRTAM-A 157
Query: 75 MDGRMLDGRELRVQMARYGRPPSSSRSRGGRDRDRRRDRSRSRDRRYTRSRSFSSRSR-- 132
+D + GR+++V R RP S+ DR R R +R +FSSR+R
Sbjct: 158 LDESLFRGRQIKVGAKRTNRPGIST-----------TDRGFPRARFRSRGGNFSSRARYY 206
Query: 133 SGSKSP 138
SG P
Sbjct: 207 SGYTPP 212
>gi|226481703|emb|CAX79117.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
Length = 115
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 53/97 (54%), Gaps = 1/97 (1%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
SL + +L DDLRR F R G + D+ IP D FT +G+AF+ F + RDAEDA
Sbjct: 7 SLYIRHLPDTCRHDDLRRCFGRYGRIVDVTIPLDFFTGRMKGYAFIEFENPRDAEDAHYY 66
Query: 75 MDGRMLDGRELRVQMAR-YGRPPSSSRSRGGRDRDRR 110
MD GR++ V+ R Y + P+ R + RD R
Sbjct: 67 MDHTRFMGRDIEVEFTRGYRKTPAEMRLKERRDEPHR 103
>gi|196232841|ref|ZP_03131691.1| RNP-1 like RNA-binding protein [Chthoniobacter flavus Ellin428]
gi|196223040|gb|EDY17560.1| RNP-1 like RNA-binding protein [Chthoniobacter flavus Ellin428]
Length = 107
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 43/76 (56%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L V NL++ TT DL+ F G V + + +D+FT +SRGF FV +A+ A+D
Sbjct: 5 LYVGNLSFDTTEMDLQDTFAEAGTVSEATLMQDKFTGKSRGFGFVTMSSSEEAQKAIDLF 64
Query: 76 DGRMLDGRELRVQMAR 91
G+ + GR L V AR
Sbjct: 65 HGKTVQGRALTVNEAR 80
>gi|327287898|ref|XP_003228665.1| PREDICTED: polyadenylate-binding protein 2-like [Anolis
carolinensis]
Length = 196
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 61/119 (51%), Gaps = 7/119 (5%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
S+ V N+ Y T ++L F CG V + I D++T +GFA++ F DK +L A
Sbjct: 62 SIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKYTGHPKGFAYIEFSDKESVRTSL-A 120
Query: 75 MDGRMLDGRELRVQMARYGRPPSSSRSRG---GRDRDRRRDRSRSRDRRYTRSRSFSSR 130
+D + GR+++V R RP S+ RG R R R S SR R Y+ FSSR
Sbjct: 121 LDESLFRGRQIKVIPKRTNRPGISTTDRGFPRTRYRGRGSGYSSSRARFYS---GFSSR 176
>gi|350538645|ref|NP_001233728.1| RNA-binding motif 3 [Cricetulus griseus]
gi|189170130|gb|ACD80090.1| RNA-binding motif 3 [Cricetulus griseus]
Length = 156
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 53/102 (51%), Gaps = 4/102 (3%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L V L + T L F G + ++ + +DR T+ SRGF F+ F + A DA+ AM
Sbjct: 8 LFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRAM 67
Query: 76 DGRMLDGRELRVQMARYGRPPSSSRSRGGRDRDRRRDRSRSR 117
+G LDGR++RV A S+ SRGG R RS SR
Sbjct: 68 NGESLDGRQIRVDHA----GKSARGSRGGAFGAHGRGRSYSR 105
>gi|226476572|emb|CAX72178.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226476574|emb|CAX72179.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
Length = 125
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 53/97 (54%), Gaps = 1/97 (1%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
SL + +L DDLRR F R G + D+ IP D FT +G+AF+ F + RDAEDA
Sbjct: 7 SLYIRHLPDTCRHDDLRRCFGRYGRIVDVTIPLDFFTGRMKGYAFIEFENPRDAEDAHYY 66
Query: 75 MDGRMLDGRELRVQMAR-YGRPPSSSRSRGGRDRDRR 110
MD GR++ V+ R Y + P+ R + RD R
Sbjct: 67 MDHTRFMGRDIEVEFTRGYRKTPAEMRLKERRDEPHR 103
>gi|164427760|ref|XP_965121.2| hypothetical protein NCU02736 [Neurospora crassa OR74A]
gi|157071873|gb|EAA35885.2| predicted protein [Neurospora crassa OR74A]
Length = 200
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 46/78 (58%)
Query: 13 MVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDAL 72
M L V L++ T + LR FE G V + + +DR T SRGF FVR+ + DAE+A+
Sbjct: 1 MAKLFVGGLSWNTDDNMLRAKFEEFGAVEEAVVVKDRDTGRSRGFGFVRYGNDADAENAI 60
Query: 73 DAMDGRMLDGRELRVQMA 90
MDG+ DGR +RV A
Sbjct: 61 ANMDGQEFDGRRVRVDKA 78
>gi|169772913|ref|XP_001820925.1| glycine-rich RNA-binding protein 2 [Aspergillus oryzae RIB40]
gi|238490830|ref|XP_002376652.1| heterogeneous nuclear ribonucleoprotein G, putative [Aspergillus
flavus NRRL3357]
gi|83768786|dbj|BAE58923.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220697065|gb|EED53406.1| heterogeneous nuclear ribonucleoprotein G, putative [Aspergillus
flavus NRRL3357]
Length = 125
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
+ V NL++ T + LR+ F G V D + +DR T SRGF FV F + +A+ A+ +
Sbjct: 6 VYVGNLSWNTNDESLRQTFSEFGNVLDAIVMKDRETGRSRGFGFVTFSAQTEADAAIGGL 65
Query: 76 DGRMLDGRELRVQMARYGRPPSSSR 100
+ + LDGR +RV +A RP SR
Sbjct: 66 NEQELDGRRIRVNLAN-ARPAGGSR 89
>gi|327398778|ref|YP_004339647.1| RNP-1 like RNA-binding protein [Hippea maritima DSM 10411]
gi|327181407|gb|AEA33588.1| RNP-1 like RNA-binding protein [Hippea maritima DSM 10411]
Length = 86
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
+L V NL Y TT D+L+ +F GEV I DR T SRGF FV D DA+ A+D+
Sbjct: 4 TLYVGNLPYSTTEDELKELFGEYGEVSSTKIITDRETGRSRGFGFVEMSDD-DAQKAIDS 62
Query: 75 MDGRMLDGRELRVQMARYGRP 95
++G GR L+V AR +P
Sbjct: 63 LNGVNFGGRNLKVNEARERKP 83
>gi|302762278|ref|XP_002964561.1| hypothetical protein SELMODRAFT_81392 [Selaginella moellendorffii]
gi|302814304|ref|XP_002988836.1| hypothetical protein SELMODRAFT_128832 [Selaginella moellendorffii]
gi|300143407|gb|EFJ10098.1| hypothetical protein SELMODRAFT_128832 [Selaginella moellendorffii]
gi|300168290|gb|EFJ34894.1| hypothetical protein SELMODRAFT_81392 [Selaginella moellendorffii]
Length = 149
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 48/80 (60%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L + L + T LR F GE+ ++ + +DR T SRGF FV + ++A+ A++AM
Sbjct: 39 LFIGGLAWGTEERGLRDAFSPFGEIIEVRVIQDRETGRSRGFGFVSYITDQEAQKAMEAM 98
Query: 76 DGRMLDGRELRVQMARYGRP 95
DGR+LDGR +RV A +P
Sbjct: 99 DGRVLDGRTIRVNYATQRQP 118
>gi|22022315|dbj|BAC06514.1| transformer-2b [Oryzias latipes]
Length = 288
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 48/82 (58%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
L V L+ TT DL+ VF + G + D+ I D+ +R SRGFAFV F + DA++A +
Sbjct: 122 ACLGVFGLSLYTTERDLKDVFSKYGPLADVSIVYDQQSRRSRGFAFVYFENTPDAKEAKE 181
Query: 74 AMDGRMLDGRELRVQMARYGRP 95
+G LDGR +RV + RP
Sbjct: 182 KANGMELDGRRIRVDFSITKRP 203
>gi|351706796|gb|EHB09715.1| Transformer-2 protein-like protein beta [Heterocephalus glaber]
Length = 188
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 50/86 (58%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
L + L+ TT DLR VF +CG + D+ I D+ +R SRGFAFV F + DA++ +
Sbjct: 18 CCLGLFGLSLYTTERDLREVFSKCGPITDLSIVYDQQSRCSRGFAFVYFENVDDAKETKE 77
Query: 74 AMDGRMLDGRELRVQMARYGRPPSSS 99
+G LDGR +RV + RP + +
Sbjct: 78 RANGMELDGRRIRVDFSITKRPHTPT 103
>gi|291400295|ref|XP_002716399.1| PREDICTED: splicing factor, arginine/serine-rich 10 [Oryctolagus
cuniculus]
Length = 240
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 48/82 (58%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
L V L+ TT DLR VF + G + D+ I D+ +R SRGFAFV F + DA++A +
Sbjct: 70 CCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKE 129
Query: 74 AMDGRMLDGRELRVQMARYGRP 95
+G LDGR +RV + RP
Sbjct: 130 RANGMELDGRRIRVDFSITKRP 151
>gi|409993905|ref|ZP_11277031.1| RNA-binding region RNP-1 [Arthrospira platensis str. Paraca]
gi|291569285|dbj|BAI91557.1| RNA-binding protein [Arthrospira platensis NIES-39]
gi|409935253|gb|EKN76791.1| RNA-binding region RNP-1 [Arthrospira platensis str. Paraca]
Length = 103
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 45/78 (57%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
+S+ V NL+Y T DDL VF G V + +P DR T RGF FV + + + A+D
Sbjct: 1 MSIYVGNLSYEVTEDDLTAVFAEYGSVKRVKLPTDRETGRMRGFGFVEMDTEAEEQSAID 60
Query: 74 AMDGRMLDGRELRVQMAR 91
A+DG GR+LRV A+
Sbjct: 61 ALDGAEWCGRDLRVNKAK 78
>gi|449017398|dbj|BAM80800.1| similar to SR family splicing factor SC35 [Cyanidioschyzon merolae
strain 10D]
Length = 194
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 48/86 (55%)
Query: 9 RIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDA 68
++ V L V N+ + T +DL +F G+V DI+IP DR R RGFAFVR A
Sbjct: 64 ELQNSVGLMVRNIPFGTRQEDLLELFRPYGDVIDIFIPWDRQLRRIRGFAFVRLQTLEQA 123
Query: 69 EDALDAMDGRMLDGRELRVQMARYGR 94
E A+ A+DG + R + V+ A Y R
Sbjct: 124 EAAIAALDGSTMRERIIAVKRAEYER 149
>gi|126339500|ref|XP_001362144.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1-like [Monodelphis domestica]
Length = 217
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 53/90 (58%), Gaps = 4/90 (4%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MS G P + ++ V NL + T +DL R+F + G+V + I +D+ TR+S+G AF+
Sbjct: 1 MSGGLAPSK----STVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFI 56
Query: 61 RFFDKRDAEDALDAMDGRMLDGRELRVQMA 90
F DK A++ A++ + L GR ++ +A
Sbjct: 57 LFLDKESAQNCSRALNNKQLFGRVIKASIA 86
>gi|410924411|ref|XP_003975675.1| PREDICTED: cold-inducible RNA-binding protein-like [Takifugu
rubripes]
Length = 170
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 47/81 (58%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L + L++ T + L F + G + + + RD+ T SRGF FV++ DA+DA+ AM
Sbjct: 7 LFIGGLSFETNEESLAEAFGKYGTIEKVDVIRDKETGRSRGFGFVKYESVEDAKDAMTAM 66
Query: 76 DGRMLDGRELRVQMARYGRPP 96
+G+ LDGR +RV A G P
Sbjct: 67 NGKSLDGRAIRVDEAGKGLRP 87
>gi|440755781|ref|ZP_20934983.1| RNA recognition motif family protein [Microcystis aeruginosa
TAIHU98]
gi|440175987|gb|ELP55356.1| RNA recognition motif family protein [Microcystis aeruginosa
TAIHU98]
Length = 97
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 55/97 (56%), Gaps = 1/97 (1%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
+S+ V NL+Y + DDL VF G+V ++IP D+ T+ RGFAFV +K A+
Sbjct: 1 MSIFVGNLSYDISQDDLVEVFTDYGKVQRVHIPVDKETQRKRGFAFVEMENKAQETKAIA 60
Query: 74 AMDGRMLDGRELRVQMARYGRPPSSSRSRGGRDRDRR 110
A+DG GR ++V AR R + + GG DR +R
Sbjct: 61 ALDGAEWMGRAIKVNEAR-DREERAPFNGGGGDRKKR 96
>gi|395538109|ref|XP_003771028.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1-like [Sarcophilus harrisii]
Length = 217
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 53/90 (58%), Gaps = 4/90 (4%)
Query: 1 MSYGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
MS G P + ++ V NL + T +DL R+F + G+V + I +D+ TR+S+G AF+
Sbjct: 1 MSGGLAPSK----STVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFI 56
Query: 61 RFFDKRDAEDALDAMDGRMLDGRELRVQMA 90
F DK A++ A++ + L GR ++ +A
Sbjct: 57 LFLDKESAQNCSRALNNKQLFGRVIKASIA 86
>gi|422303993|ref|ZP_16391342.1| putative RNA-binding protein rbpB [Microcystis aeruginosa PCC
9806]
gi|425468337|ref|ZP_18847364.1| putative RNA-binding protein rbpB [Microcystis aeruginosa PCC
9701]
gi|389790955|emb|CCI13203.1| putative RNA-binding protein rbpB [Microcystis aeruginosa PCC
9806]
gi|389885016|emb|CCI34745.1| putative RNA-binding protein rbpB [Microcystis aeruginosa PCC
9701]
Length = 100
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 44/78 (56%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
+++ V NL Y T DDL+ VF G V +Y+P DR T + RGF FV + A++
Sbjct: 1 MTIYVGNLVYDVTTDDLKEVFAEYGTVSRVYLPVDRETGKMRGFGFVEMSSDEEEAKAIE 60
Query: 74 AMDGRMLDGRELRVQMAR 91
+DG GR+++V AR
Sbjct: 61 TLDGAEWMGRQMKVNKAR 78
>gi|385305287|gb|EIF49275.1| nuclear localization sequence binding protein [Dekkera bruxellensis
AWRI1499]
Length = 358
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 45/73 (61%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
+L V NL++ T DD+R FE G + I IP T + RGFA+V+F +A+ ALD
Sbjct: 216 TLFVGNLSFEATMDDVRGAFESFGSIEXIRIPTRPGTEDPRGFAYVQFSSVEEAKAALDG 275
Query: 75 MDGRMLDGRELRV 87
M+G ++GR +R+
Sbjct: 276 MNGEYINGRSVRL 288
Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 47/103 (45%), Gaps = 9/103 (8%)
Query: 15 SLKVDNLTYRTTPDDLRRVF--ERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDAL 72
++ V L++ D L++ F E V + + + S+GF +V F AE A+
Sbjct: 109 TMFVGRLSWNVDDDGLKQFFVDENVPGVXSARVITENGSGRSKGFGYVDFDSVAHAEAAV 168
Query: 73 DAMDGRMLDGRELRVQMARYGRPPSSSRSRGGRDRDRRRDRSR 115
DG +DGR + + MA +S+ R DR +R++
Sbjct: 169 KKYDGAEIDGRAVHLDMA-------ASKPRSSSPNDRANNRAK 204
>gi|430745977|ref|YP_007205106.1| RRM domain-containing RNA-binding protein [Singulisphaera
acidiphila DSM 18658]
gi|430017697|gb|AGA29411.1| RRM domain-containing RNA-binding protein [Singulisphaera
acidiphila DSM 18658]
Length = 130
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 46/77 (59%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
++ V NL Y TT DDL+++FE G V + + D+F+ SRGF FV +A+ A+DA
Sbjct: 4 NIYVGNLPYDTTGDDLKQLFETYGAVSNGQVIIDKFSGRSRGFGFVEMDHDDEAQAAIDA 63
Query: 75 MDGRMLDGRELRVQMAR 91
++G GR L V AR
Sbjct: 64 LNGTAYGGRPLTVNEAR 80
>gi|170078237|ref|YP_001734875.1| RNA-binding protein [Synechococcus sp. PCC 7002]
gi|169885906|gb|ACA99619.1| RNA-binding protein [Synechococcus sp. PCC 7002]
Length = 95
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 47/78 (60%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
+S+ + NL+Y+ T +DL+ F G+V + +P DR T RGFAFV + + A++
Sbjct: 1 MSIYIGNLSYQVTDEDLKETFAEYGKVNRVQVPTDRETGRPRGFAFVEMSSEDEENAAIE 60
Query: 74 AMDGRMLDGRELRVQMAR 91
A+DG GR+L+V A+
Sbjct: 61 ALDGAEWMGRDLKVNKAK 78
>gi|431838851|gb|ELK00780.1| Insulin-like growth factor 2 mRNA-binding protein 2 [Pteropus
alecto]
Length = 820
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 58/112 (51%), Gaps = 5/112 (4%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
L V L+ TT DLR VF + G + D+ I D+ +R SRGFAFV F + DA++A +
Sbjct: 108 CLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKER 167
Query: 75 MDGRMLDGRELRVQMARYGRP----PSSSRSRGGRDRDRRRD-RSRSRDRRY 121
+G LDGR +RV + RP P R RRRD R DR Y
Sbjct: 168 ANGMELDGRRIRVDFSITKRPHTPTPGIYMGRPTYGSSRRRDYYDRGYDRGY 219
>gi|49204551|dbj|BAD24703.1| transformer-2b4 [Oryzias latipes]
Length = 287
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 48/82 (58%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
L V L+ TT DL+ VF + G + D+ I D+ +R SRGFAFV F + DA++A +
Sbjct: 121 ACLGVFGLSLYTTERDLKDVFSKYGPLADVSIVYDQQSRRSRGFAFVYFENTPDAKEAKE 180
Query: 74 AMDGRMLDGRELRVQMARYGRP 95
+G LDGR +RV + RP
Sbjct: 181 KANGMELDGRRIRVDFSITKRP 202
>gi|410908755|ref|XP_003967856.1| PREDICTED: polyadenylate-binding protein 2-like isoform 1 [Takifugu
rubripes]
Length = 232
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 62/126 (49%), Gaps = 14/126 (11%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
S+ V N+ Y T ++L F CG V + I D++T +GFA++ F DK A+ A
Sbjct: 99 SIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKYTGHPKGFAYIEFADKESVRTAM-A 157
Query: 75 MDGRMLDGRELRVQMARYGRPPSSSRSRGGRDRDRRRDRSRSRDRRYTRSRSFSSRSR-- 132
+D + GR+++V R RP S+ DR R R +R SFSSR+R
Sbjct: 158 LDESLFRGRQIKVVAKRTNRPGIST-----------TDRGFPRARFRSRGGSFSSRARYY 206
Query: 133 SGSKSP 138
SG P
Sbjct: 207 SGYTPP 212
>gi|392593259|gb|EIW82584.1| RNA-binding domain-containing protein [Coniophora puteana
RWD-64-598 SS2]
Length = 116
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 46/76 (60%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
+ V NL++ TT D LR+ F G V D + RDR T SRGF FV + ++AE A+ +
Sbjct: 6 IYVGNLSWNTTDDTLRQAFSTFGNVVDSVVMRDRDTGRSRGFGFVTYSSTQEAESAISGL 65
Query: 76 DGRMLDGRELRVQMAR 91
+ + LDGR ++V +A
Sbjct: 66 NDQDLDGRRIKVNIAN 81
>gi|296811816|ref|XP_002846246.1| glycine-rich RNA-binding protein [Arthroderma otae CBS 113480]
gi|238843634|gb|EEQ33296.1| glycine-rich RNA-binding protein [Arthroderma otae CBS 113480]
Length = 133
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 49/84 (58%), Gaps = 6/84 (7%)
Query: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKR 66
PP+ L + L + TT D LR F + G + + + +DR T SRGF FVRF ++
Sbjct: 3 PPK------LFIGGLAWHTTDDTLRDGFSKFGTIEEAIVVKDRDTNRSRGFGFVRFSNES 56
Query: 67 DAEDALDAMDGRMLDGRELRVQMA 90
+A+ AL+AM+ + DGR +RV A
Sbjct: 57 EADAALNAMNNQEFDGRVIRVDKA 80
>gi|443315198|ref|ZP_21044702.1| RRM domain-containing RNA-binding protein [Leptolyngbya sp. PCC
6406]
gi|442785209|gb|ELR95045.1| RRM domain-containing RNA-binding protein [Leptolyngbya sp. PCC
6406]
Length = 103
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 49/78 (62%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
+S+ V NL+Y T +DL +VF+ GEV + +P DR T RGFAFV + + + A++
Sbjct: 1 MSIYVGNLSYDVTREDLEQVFKEYGEVSRVSLPTDRETGRPRGFAFVDMQAEAEEDKAIE 60
Query: 74 AMDGRMLDGRELRVQMAR 91
A+DG GR++RV AR
Sbjct: 61 ALDGAEWMGRDMRVNKAR 78
>gi|226467596|emb|CAX69674.1| Splicing factor, arginine/serine-rich 7 [Schistosoma japonicum]
Length = 284
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 58/114 (50%), Gaps = 7/114 (6%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L + L +DL R +CGEV D+++ R GFAF + DAE A+ ++
Sbjct: 12 LYIGGLVENVLKEDLVRELSKCGEVVDVWV-----ARNPPGFAFAEYVKSSDAEKAVRSL 66
Query: 76 DGRMLDGRELRVQMARYGRPPSSSRS--RGGRDRDRRRDRSRSRDRRYTRSRSF 127
DG + G +RV+ A GR S+ RS RGGR R R R+ RR R+ S+
Sbjct: 67 DGVNVCGSRIRVEFAHGGRSKSAVRSAFRGGRPVGRGPLRRRNSPRRSGRNSSY 120
>gi|431893576|gb|ELK03439.1| Putative RNA-binding protein 3 [Pteropus alecto]
Length = 213
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 53/102 (51%), Gaps = 4/102 (3%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L V L + T L F G + ++ + +DR T+ SRGF F+ F + A DA+ AM
Sbjct: 65 LFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRAM 124
Query: 76 DGRMLDGRELRVQMARYGRPPSSSRSRGGRDRDRRRDRSRSR 117
+G LDGR++RV A S+ +RGG R RS SR
Sbjct: 125 NGESLDGRQIRVDHA----GKSARGTRGGAFGAHGRGRSYSR 162
>gi|409080475|gb|EKM80835.1| hypothetical protein AGABI1DRAFT_112564 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426197375|gb|EKV47302.1| hypothetical protein AGABI2DRAFT_192533 [Agaricus bisporus var.
bisporus H97]
Length = 168
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 54/88 (61%), Gaps = 3/88 (3%)
Query: 6 PPPRIEGMVSLKVD---NLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRF 62
PP R ++S+K NL++ TT + LR+ F G+V D + RDR T SRGF FV F
Sbjct: 16 PPEREAKLMSVKNTVYRNLSWNTTDETLRQAFSDFGQVLDSIVMRDRDTGRSRGFGFVTF 75
Query: 63 FDKRDAEDALDAMDGRMLDGRELRVQMA 90
+ +A+ A++ ++ + LDGR ++V MA
Sbjct: 76 SNSGEADAAINGLNEQELDGRRIKVNMA 103
>gi|351710148|gb|EHB13067.1| Transformer-2 protein-like protein beta [Heterocephalus glaber]
Length = 271
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 63/123 (51%), Gaps = 6/123 (4%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
L V L+ TT DLR VF + G + D+ I D+ +R SRGFAFV F + DA++A +
Sbjct: 102 CCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKE 161
Query: 74 AMDGRMLDGRELRVQMARYGRP----PSSSRSRGGRDRDRRRDRS-RSRDRRYTRSRSFS 128
+G DGR +RV + RP P R RRRD S R DR Y R +
Sbjct: 162 CANGMEPDGRRIRVGFSITKRPHTPTPGIYMGRLTYASSRRRDYSDRGYDRGYD-DRDYH 220
Query: 129 SRS 131
SRS
Sbjct: 221 SRS 223
>gi|367020484|ref|XP_003659527.1| hypothetical protein MYCTH_2296694 [Myceliophthora thermophila
ATCC 42464]
gi|347006794|gb|AEO54282.1| hypothetical protein MYCTH_2296694 [Myceliophthora thermophila
ATCC 42464]
Length = 153
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 46/78 (58%)
Query: 13 MVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDAL 72
M L + L + T LR+ FE GEV + + +DR T SRGF FVR+ ++ DA+ A+
Sbjct: 1 MSKLFIGGLAWHTEEATLRQKFEEFGEVEEAVVVKDRDTGRSRGFGFVRYINEDDAQKAI 60
Query: 73 DAMDGRMLDGRELRVQMA 90
AM+ DGR++RV A
Sbjct: 61 TAMNNVEFDGRQIRVDKA 78
>gi|221048043|gb|ACL98129.1| hyperosmotic glycine rich protein [Epinephelus coioides]
Length = 175
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 52/88 (59%), Gaps = 2/88 (2%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L + L++ T + L F + G + + + RD+ T SRGF FV++ + DA+DAL+ M
Sbjct: 7 LFIGGLSFETNEESLAAAFGKYGTIEKVDVIRDKETGRSRGFGFVKYDNCDDAKDALEGM 66
Query: 76 DGRMLDGRELRVQMARYGRPPSSSRSRG 103
+G+ LDGR +RV A G+ S+R G
Sbjct: 67 NGKTLDGRAIRVDEA--GKGGRSNRGFG 92
>gi|154280022|ref|XP_001540824.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150412767|gb|EDN08154.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 311
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 47/81 (58%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
+L V + R T D+ R+FE+ G+V I D T+ESRGF FV+ A+ A +
Sbjct: 73 NLFVTGIHPRLTESDVSRLFEKYGDVESCSIMVDPHTKESRGFGFVKMVTAEQADAAKEG 132
Query: 75 MDGRMLDGRELRVQMARYGRP 95
+ G +++GR L ++ AR GRP
Sbjct: 133 LQGEVIEGRTLSIEKARRGRP 153
>gi|425445615|ref|ZP_18825643.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9443]
gi|389734381|emb|CCI01971.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9443]
Length = 97
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 52/97 (53%), Gaps = 1/97 (1%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
+S+ V NL + +D+ VF G + ++ P +R T RGFAFV A+
Sbjct: 1 MSIYVGNLPFEVDQNDVVEVFTEYGTIKRVHFPMERETGRKRGFAFVEMETPEQESAAIA 60
Query: 74 AMDGRMLDGRELRVQMARYGRPPSSSRSRGGRDRDRR 110
A+DG GREL+V AR + P SS + G R+R+RR
Sbjct: 61 ALDGAQWMGRELKVNQAR-EKEPRSSFAGGNRNRERR 96
>gi|443711870|gb|ELU05439.1| hypothetical protein CAPTEDRAFT_124300 [Capitella teleta]
Length = 135
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 53/93 (56%), Gaps = 9/93 (9%)
Query: 3 YGRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRF 62
Y RPP SL V N+ T ++LR +F + G + D+Y+P D +TR RGF+++++
Sbjct: 4 YSRPP-----NTSLYVRNVPDTTRSEELRSLFGKYGPISDVYLPLDFYTRRPRGFSYIQY 58
Query: 63 ----FDKRDAEDALDAMDGRMLDGRELRVQMAR 91
D RDAEDAL +D G +L ++ AR
Sbjct: 59 PSFSIDPRDAEDALYHLDRTRFFGCDLEIEFAR 91
>gi|348515473|ref|XP_003445264.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like 1-like
[Oreochromis niloticus]
Length = 391
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 45/75 (60%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L + L TT L + F + G + ++ + +DR T +SRGFAFV F DA+DA M
Sbjct: 10 LFIGGLNTETTEKALEQYFSKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAAREM 69
Query: 76 DGRMLDGRELRVQMA 90
+G+ LDG+ ++V+ A
Sbjct: 70 NGKSLDGKPIKVEQA 84
>gi|302786120|ref|XP_002974831.1| hypothetical protein SELMODRAFT_102070 [Selaginella moellendorffii]
gi|300157726|gb|EFJ24351.1| hypothetical protein SELMODRAFT_102070 [Selaginella moellendorffii]
Length = 95
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 27 PDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAMDGRMLDGRELR 86
P+D+R FE+ G + D+Y+P+D +T E RGF FV++ + DA A MD ++L GRE+
Sbjct: 2 PEDVRGPFEQFGHIKDVYLPKDFYTGEPRGFGFVQYMNPEDAARAKHHMDRQVLGGREIT 61
Query: 87 VQMARYGR-PPSSSRSR 102
V A R PS R +
Sbjct: 62 VVFAEENRKKPSEMRMK 78
>gi|336272443|ref|XP_003350978.1| hypothetical protein SMAC_04282 [Sordaria macrospora k-hell]
gi|380090745|emb|CCC04915.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 192
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 46/78 (58%)
Query: 13 MVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDAL 72
M L V L++ T + LR FE G V + + +DR T SRGF FVR+ + DAE+A+
Sbjct: 1 MAKLFVGGLSWNTDDNMLRAKFEEFGAVEEAVVVKDRDTGRSRGFGFVRYANDADAENAI 60
Query: 73 DAMDGRMLDGRELRVQMA 90
MDG+ DGR +RV A
Sbjct: 61 ANMDGQEFDGRRVRVDKA 78
>gi|408393961|gb|EKJ73218.1| hypothetical protein FPSE_06642 [Fusarium pseudograminearum
CS3096]
Length = 112
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 46/76 (60%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L + NL++ TT D LR + G + D + RDR T SRGF FV F +AE+A++ +
Sbjct: 5 LYIGNLSWNTTDDTLRNACQEFGMIIDSIVMRDRDTGRSRGFGFVTFGSVEEAENAVNGL 64
Query: 76 DGRMLDGRELRVQMAR 91
+ + LDGR ++V MA
Sbjct: 65 NEQELDGRRIKVNMAN 80
>gi|116620134|ref|YP_822290.1| RNP-1 like RNA-binding protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116223296|gb|ABJ82005.1| RNP-1 like RNA-binding protein [Candidatus Solibacter usitatus
Ellin6076]
Length = 132
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 48/79 (60%)
Query: 13 MVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDAL 72
M ++ V NL + + + +R +FER G+V I DR T SRGFAFV ++ +A+ A+
Sbjct: 1 MKNIFVGNLDFNASEEGVRSLFERYGQVNSARIMTDRETGRSRGFAFVEMENEGEADQAI 60
Query: 73 DAMDGRMLDGRELRVQMAR 91
A++G LDGR L V AR
Sbjct: 61 SALNGYTLDGRALNVNEAR 79
>gi|259089109|ref|NP_001158591.1| cold inducible RNA binding protein [Oncorhynchus mykiss]
gi|225705082|gb|ACO08387.1| Cold-inducible RNA-binding protein [Oncorhynchus mykiss]
Length = 209
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 44/75 (58%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L V L + T L F + G + + + RDR TR SRGF FV F + DA+DA+ AM
Sbjct: 7 LFVGGLCFDTDETSLEEAFSKYGNIAKVDVVRDRETRRSRGFGFVTFENPEDAKDAMAAM 66
Query: 76 DGRMLDGRELRVQMA 90
+G+ +DGR +RV A
Sbjct: 67 NGKSVDGRMIRVDEA 81
>gi|440796891|gb|ELR17992.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 147
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 46/75 (61%)
Query: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAM 75
L V L++ T + LR FE+ GEV D + +DR T +SRGF FV F +AE A +A+
Sbjct: 5 LFVGGLSWGTDDNSLRSAFEQHGEVVDAKVIQDRDTGKSRGFGFVTFASADEAEAAKNAL 64
Query: 76 DGRMLDGRELRVQMA 90
+ LDGRE+RV A
Sbjct: 65 NQTELDGREIRVDSA 79
>gi|282896133|ref|ZP_06304159.1| RNA-binding region protein RNP-1 [Raphidiopsis brookii D9]
gi|281199051|gb|EFA73926.1| RNA-binding region protein RNP-1 [Raphidiopsis brookii D9]
Length = 98
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 44/78 (56%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
+S+ V NL+Y T D L VF GEV + IP DR T RGFAFV + A++
Sbjct: 1 MSVYVGNLSYEVTQDALTAVFSEYGEVKRVQIPTDRETGRVRGFAFVEMNSEAQETAAIE 60
Query: 74 AMDGRMLDGRELRVQMAR 91
A+DG GR+L+V A+
Sbjct: 61 ALDGAEWMGRDLKVNKAK 78
>gi|240279660|gb|EER43165.1| transformer-SR ribonucleoprotein [Ajellomyces capsulatus H143]
gi|325092793|gb|EGC46103.1| transformer-SR ribonucleoprotein [Ajellomyces capsulatus H88]
Length = 315
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 47/81 (58%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
+L V + R T D+ R+FE+ G+V I D T+ESRGF FV+ A+ A +
Sbjct: 73 NLFVTGIHPRLTESDVSRLFEKYGDVESCSIMVDPHTKESRGFGFVKMVTAEQADAAKEG 132
Query: 75 MDGRMLDGRELRVQMARYGRP 95
+ G +++GR L ++ AR GRP
Sbjct: 133 LQGEVIEGRTLSIEKARRGRP 153
>gi|225562846|gb|EEH11125.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
Length = 319
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 47/81 (58%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
+L V + R T D+ R+FE+ G+V I D T+ESRGF FV+ A+ A +
Sbjct: 73 NLFVTGIHPRLTESDVSRLFEKYGDVESCSIMVDPHTKESRGFGFVKMVTAEQADAAKEG 132
Query: 75 MDGRMLDGRELRVQMARYGRP 95
+ G +++GR L ++ AR GRP
Sbjct: 133 LQGEVIEGRTLSIEKARRGRP 153
>gi|239609512|gb|EEQ86499.1| transformer-SR ribonucleoprotein [Ajellomyces dermatitidis ER-3]
gi|327350257|gb|EGE79114.1| transformer-SR ribonucleoprotein [Ajellomyces dermatitidis ATCC
18188]
Length = 315
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 48/81 (59%)
Query: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDA 74
+L V + R T D+ R+FE+ G+V + I D T+ESRGF FV+ A+ A +
Sbjct: 73 NLFVTGIHPRLTESDVSRLFEKYGDVENCSIMVDPHTKESRGFGFVKMVTSEQADAAKEG 132
Query: 75 MDGRMLDGRELRVQMARYGRP 95
+ G +++GR L ++ AR GRP
Sbjct: 133 LQGEVIEGRTLSIEKARRGRP 153
>gi|119486604|ref|ZP_01620654.1| RNA-binding region [Lyngbya sp. PCC 8106]
gi|119456221|gb|EAW37353.1| RNA-binding region [Lyngbya sp. PCC 8106]
Length = 100
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 45/78 (57%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
+S+ + NL Y T DDL+ VF G V ++IP DR T SRGFAFV + A++
Sbjct: 1 MSVYIGNLAYEVTEDDLKSVFTDYGSVKRVHIPTDRETGRSRGFAFVEMDTDSEETSAIE 60
Query: 74 AMDGRMLDGRELRVQMAR 91
+DG GR+L+V A+
Sbjct: 61 ELDGAEWMGRDLKVNKAK 78
>gi|49204567|dbj|BAD24706.1| transformer-2b7 [Oryzias latipes]
Length = 297
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 48/82 (58%)
Query: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALD 73
L V L+ TT DL+ VF + G + D+ I D+ +R SRGFAFV F + DA++A +
Sbjct: 131 ACLGVFGLSLYTTERDLKDVFSKYGPLADVSIVYDQQSRRSRGFAFVYFENTPDAKEAKE 190
Query: 74 AMDGRMLDGRELRVQMARYGRP 95
+G LDGR +RV + RP
Sbjct: 191 KANGMELDGRRIRVDFSITKRP 212
>gi|12659074|gb|AAK01176.1| RNA-binding protein [Triticum aestivum]
Length = 183
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 52/84 (61%), Gaps = 3/84 (3%)
Query: 18 VDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFFDKRDAEDALDAMDG 77
V +L++ TT DL+ F + G V + + D+F+ SRGF FV F DK+ E+A++AM+G
Sbjct: 11 VGSLSWNTTDVDLKDAFGKFGRVTETKVVLDKFSGRSRGFGFVTFDDKKAMEEAVEAMNG 70
Query: 78 RMLDGRELRVQMARYGRPPSSSRS 101
LDGR + V+ A +P S R+
Sbjct: 71 IDLDGRNITVERA---QPQGSGRN 91
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.136 0.396
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,515,121,483
Number of Sequences: 23463169
Number of extensions: 99011080
Number of successful extensions: 822537
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 21230
Number of HSP's successfully gapped in prelim test: 12954
Number of HSP's that attempted gapping in prelim test: 512749
Number of HSP's gapped (non-prelim): 189153
length of query: 158
length of database: 8,064,228,071
effective HSP length: 120
effective length of query: 38
effective length of database: 9,543,615,087
effective search space: 362657373306
effective search space used: 362657373306
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 71 (32.0 bits)