BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy7057
(557 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9Y263|PLAP_HUMAN Phospholipase A-2-activating protein OS=Homo sapiens GN=PLAA PE=1
SV=2
Length = 795
Score = 299 bits (765), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 164/391 (41%), Positives = 236/391 (60%), Gaps = 55/391 (14%)
Query: 43 LSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGV-IQLANGIIVTGCADKT 101
LS G K TLLS SWD TAK+W + +C +T++ H AVW V I G+++TG ADKT
Sbjct: 118 LSSG-KFGTLLSGSWDTTAKVWL--NDKCMMTLQGHTAAVWAVKILPEQGLMLTGSADKT 174
Query: 102 IKLHSEEGEFLKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMYGHPN 161
+KL + G +T +GH DCVRGLA+L++T+F+SC+NDASIR W TG+C+ YGH N
Sbjct: 175 VKLW-KAGRCERTFSGHEDCVRGLAILSETEFLSCANDASIRRWQ-ITGECLEVYYGHTN 232
Query: 162 FIYSVAAH---GDLITSGGEDQCVCVYQN-KAQNSFMIPAMSVWAVAILPNSDIVTGSSD 217
+IYS++ D +T+ ED+ + ++++ + + +PA S+W +L N DIV G+SD
Sbjct: 233 YIYSISVFPNCRDFVTT-AEDRSLRIWKHGECAQTIRLPAQSIWCCCVLDNGDIVVGASD 291
Query: 218 GIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPDRQAE 277
GI+RVF+ + DR A AEE+K A E+E+ A D +
Sbjct: 292 GIIRVFTESEDRTAS-------AEEIK----AFEKELS-------------HATIDSKTG 327
Query: 278 DAVQAQYAEEVKKLKSANEQEIGGVKVSDLPGKEVLYEPGKADGDVKMVREGSTVVAYSW 337
D +G + LPG+E L EPG +G +++R+G V AY W
Sbjct: 328 D--------------------LGDINAEQLPGREHLNEPGTREGQTRLIRDGEKVEAYQW 367
Query: 338 SEASREWNKLGDVMGSAGGTQESSGKVLYQGKEYDFVFSVDIEEGKPPLKLPYNVSEDPW 397
S + W K+GDV+GS+G Q++SGKVLY+GKE+D+VFS+D+ EG P KLPYN S+DPW
Sbjct: 368 SVSEGRWIKIGDVVGSSGANQQTSGKVLYEGKEFDYVFSIDVNEGGPSYKLPYNTSDDPW 427
Query: 398 HAAQAFIHTHHLSQMFLEQVANFIMTNSKSK 428
A F+ + L+ MFL+QVA FI+ N+K +
Sbjct: 428 LTAYNFLQKNDLNPMFLDQVAKFIIDNTKGQ 458
Score = 70.9 bits (172), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 48/76 (63%), Gaps = 5/76 (6%)
Query: 471 HLTSVDIEEGKPPLKLPYNVSEDPWHAAQAFIHTHHLSQMFLEQVANFIMTNSKSKQGPT 530
++ S+D+ EG P KLPYN S+DPW A F+ + L+ MFL+QVA FI+ N+K G
Sbjct: 403 YVFSIDVNEGGPSYKLPYNTSDDPWLTAYNFLQKNDLNPMFLDQVAKFIIDNTK---GQM 459
Query: 531 VTQTPPSGEYCDPFTG 546
+ PS + DPFTG
Sbjct: 460 LGLGNPS--FSDPFTG 473
>sp|Q6GM65|PLAP_XENLA Phospholipase A-2-activating protein OS=Xenopus laevis GN=plaa PE=2
SV=2
Length = 799
Score = 290 bits (743), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 160/400 (40%), Positives = 227/400 (56%), Gaps = 57/400 (14%)
Query: 43 LSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGV-IQLANGIIVTGCADKT 101
LS G K TLLS SWD T K+W + +C +T++ H AVW V I G+++TG ADK+
Sbjct: 124 LSSG-KFGTLLSGSWDTTGKVWL--NDKCMMTLQGHTAAVWAVKILPEQGLMLTGSADKS 180
Query: 102 IKLHSEEGEFLKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMYGHPN 161
IKL + G T GH DCVRGLA +NDT+F+SCSNDAS+R W TG+C+ YGH N
Sbjct: 181 IKLW-KAGRCEMTFLGHEDCVRGLATINDTEFLSCSNDASVRRW-LITGECLQIYYGHTN 238
Query: 162 FIYSVAAH---GDLITSGGEDQCVCVYQN-KAQNSFMIPAMSVWAVAILPNSDIVTGSSD 217
+IYSV D +T+ ED+ + +++ + + +PA SVW +L N DIV G+SD
Sbjct: 239 YIYSVCLFPNSQDFVTTS-EDRSIRIWRKGECTQTIRLPAQSVWCCCVLDNGDIVVGASD 297
Query: 218 GIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPDRQAE 277
GI+RVF+ +PDR A
Sbjct: 298 ---------------------------------------------GIIRVFTESPDRIAS 312
Query: 278 -DAVQAQYAEEVKKLKSANEQEIGGVKVSDLPGKEVLYEPGKADGDVKMVREGSTVVAYS 336
+ +QA E K ++G +K+ DLPG++ L EPG DG ++++E V AY
Sbjct: 313 IEEIQAFENELSKATIDPKTGDLGDIKIDDLPGRDHLNEPGTRDGQTRLIKEDGKVEAYQ 372
Query: 337 WSEASREWNKLGDVMGSAGGTQESSGKVLYQGKEYDFVFSVDIEEGKPPLKLPYNVSEDP 396
WS W K+GDV+GS+G TQ++SG+VL++GKEYD+VF++D+ E P KLPYN++EDP
Sbjct: 373 WSTGEGRWMKIGDVVGSSGATQQTSGRVLFEGKEYDYVFTIDVNESGPSHKLPYNLTEDP 432
Query: 397 WHAAQAFIHTHHLSQMFLEQVANFIMTNSKSKQGPTEYDF 436
W A F+ + L+ MFL+QVA FI+ N+ + T +
Sbjct: 433 WLVAYNFLQKNDLNPMFLDQVAKFIIDNTAGQTPSTNLGY 472
Score = 66.6 bits (161), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 46/77 (59%), Gaps = 8/77 (10%)
Query: 471 HLTSVDIEEGKPPLKLPYNVSEDPWHAAQAFIHTHHLSQMFLEQVANFIMTNSKSKQGPT 530
++ ++D+ E P KLPYN++EDPW A F+ + L+ MFL+QVA FI+ N T
Sbjct: 409 YVFTIDVNESGPSHKLPYNLTEDPWLVAYNFLQKNDLNPMFLDQVAKFIIDN-------T 461
Query: 531 VTQTPPSG-EYCDPFTG 546
QTP + Y DP TG
Sbjct: 462 AGQTPSTNLGYTDPLTG 478
>sp|P54319|PLAP_RAT Phospholipase A-2-activating protein OS=Rattus norvegicus GN=Plaa
PE=2 SV=3
Length = 795
Score = 287 bits (735), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 160/399 (40%), Positives = 230/399 (57%), Gaps = 71/399 (17%)
Query: 43 LSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGV-IQLANGIIVTGCADKT 101
LS G K TLLS SWD TAK+W + +C +T++ H AVW V I G+++TG ADKT
Sbjct: 118 LSSG-KFGTLLSGSWDTTAKVWL--NDKCMMTLQGHTAAVWAVKILPEQGLMLTGSADKT 174
Query: 102 IKLHSEEGEFLKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMYGHPN 161
IKL + G +T +GH DCVRGLA+L++T+F+SC+NDASIR W TG+C+ YGH N
Sbjct: 175 IKLW-KAGRCERTFSGHEDCVRGLAILSETEFLSCANDASIRRWQ-ITGECLGVYYGHTN 232
Query: 162 FIYSVAAH---GDLITSGGEDQCVCVYQN-KAQNSFMIPAMSVWAVAILPNSDIVTGSSD 217
+IYS++ D +T+ ED+ + ++++ + + +PA S+W +L N DIV G+SD
Sbjct: 233 YIYSISVFPNCRDFVTTA-EDRSLRIWKHGECAQTIRLPAQSIWCCCVLDNGDIVVGASD 291
Query: 218 GIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPDRQAE 277
GI+RVF+ +R A
Sbjct: 292 ---------------------------------------------GIIRVFTEADERTAS 306
Query: 278 DAVQAQYAEEVKKLKSANEQ--------EIGGVKVSDLPGKEVLYEPGKADGDVKMVREG 329
AEE+K + Q ++G + LPG+E L EPG +G +++R+G
Sbjct: 307 -------AEEIKAFERELSQATIDSKTGDLGDINAEQLPGREHLNEPGTREGQTRLIRDG 359
Query: 330 STVVAYSWSEASREWNKLGDVMGSAGGTQESSGKVLYQGKEYDFVFSVDIEEGKPPLKLP 389
V AY WS + W K+GDV+GS+G Q++SGKVLY+GKE+D+VFS+D+ EG P KLP
Sbjct: 360 ERVEAYQWSVSDGRWIKIGDVVGSSGANQQTSGKVLYEGKEFDYVFSIDVNEGGPSYKLP 419
Query: 390 YNVSEDPWHAAQAFIHTHHLSQMFLEQVANFIMTNSKSK 428
YNVS+DPW A F+ + L+ MFL+QVA FI+ N+K +
Sbjct: 420 YNVSDDPWLVAYNFLQKNDLNPMFLDQVAKFIIDNTKGQ 458
Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 48/76 (63%), Gaps = 5/76 (6%)
Query: 471 HLTSVDIEEGKPPLKLPYNVSEDPWHAAQAFIHTHHLSQMFLEQVANFIMTNSKSKQGPT 530
++ S+D+ EG P KLPYNVS+DPW A F+ + L+ MFL+QVA FI+ N+K +
Sbjct: 403 YVFSIDVNEGGPSYKLPYNVSDDPWLVAYNFLQKNDLNPMFLDQVAKFIIDNTKGQ---- 458
Query: 531 VTQTPPSGEYCDPFTG 546
T + + DPFTG
Sbjct: 459 -TLGLGNTSFSDPFTG 473
Score = 40.4 bits (93), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 49/116 (42%), Gaps = 17/116 (14%)
Query: 10 GHSMDVRSLSVTPDGCILSASRDKSAKLWKPN---------------DLSPGAKVNTLLS 54
GH VR L++ + LS + D S + W+ +S ++
Sbjct: 189 GHEDCVRGLAILSETEFLSCANDASIRRWQITGECLGVYYGHTNYIYSISVFPNCRDFVT 248
Query: 55 ASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHSEEGE 110
+ D + ++W + +C TIR ++W L NG IV G +D I++ +E E
Sbjct: 249 TAEDRSLRIW--KHGECAQTIRLPAQSIWCCCVLDNGDIVVGASDGIIRVFTEADE 302
>sp|P27612|PLAP_MOUSE Phospholipase A-2-activating protein OS=Mus musculus GN=Plaa PE=2
SV=4
Length = 794
Score = 287 bits (735), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 159/399 (39%), Positives = 230/399 (57%), Gaps = 71/399 (17%)
Query: 43 LSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGV-IQLANGIIVTGCADKT 101
LS G K TLLS SWD TAK+W + +C +T++ H AVW V I G+++TG ADKT
Sbjct: 118 LSSG-KFGTLLSGSWDTTAKVWL--NDKCMMTLQGHTAAVWAVKILPEQGLMLTGSADKT 174
Query: 102 IKLHSEEGEFLKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMYGHPN 161
IKL + G +T GH DCVRGLA+L++T+F+SC+NDASIR W TG+C+ +GH N
Sbjct: 175 IKLW-KAGRCERTFLGHEDCVRGLAILSETEFLSCANDASIRRWQ-ITGECLEVYFGHTN 232
Query: 162 FIYSVAAH---GDLITSGGEDQCVCVYQN-KAQNSFMIPAMSVWAVAILPNSDIVTGSSD 217
+IYS++ D +T+ ED+ + ++++ + + +PA S+W +L N DIV G+SD
Sbjct: 233 YIYSISVFPNSKDFVTTA-EDRSLRIWKHGECAQTIRLPAQSIWCCCVLENGDIVVGASD 291
Query: 218 GIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPDRQAE 277
GI+RVF+ + +R A
Sbjct: 292 ---------------------------------------------GIIRVFTESEERTAS 306
Query: 278 DAVQAQYAEEVKKLKSANEQ--------EIGGVKVSDLPGKEVLYEPGKADGDVKMVREG 329
AEE+K + Q ++G + LPG+E L EPG +G +++R+G
Sbjct: 307 -------AEEIKAFERELSQATIDSKTGDLGDINAEQLPGREHLSEPGTREGQTRLIRDG 359
Query: 330 STVVAYSWSEASREWNKLGDVMGSAGGTQESSGKVLYQGKEYDFVFSVDIEEGKPPLKLP 389
V AY WS + W K+GDV+GS+G Q++SGKVLY+GKE+D+VFS+D+ EG P KLP
Sbjct: 360 ERVEAYQWSVSDGRWIKIGDVVGSSGANQQTSGKVLYEGKEFDYVFSIDVNEGGPSYKLP 419
Query: 390 YNVSEDPWHAAQAFIHTHHLSQMFLEQVANFIMTNSKSK 428
YNVS+DPW A F+ + L+ MFL+QVA FI+ N+K +
Sbjct: 420 YNVSDDPWLVAYNFLQKNDLNPMFLDQVAKFIIDNTKGQ 458
Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 48/76 (63%), Gaps = 5/76 (6%)
Query: 471 HLTSVDIEEGKPPLKLPYNVSEDPWHAAQAFIHTHHLSQMFLEQVANFIMTNSKSKQGPT 530
++ S+D+ EG P KLPYNVS+DPW A F+ + L+ MFL+QVA FI+ N+K +
Sbjct: 403 YVFSIDVNEGGPSYKLPYNVSDDPWLVAYNFLQKNDLNPMFLDQVAKFIIDNTKGQ---- 458
Query: 531 VTQTPPSGEYCDPFTG 546
T + + DPFTG
Sbjct: 459 -TLGLGNTSFSDPFTG 473
Score = 40.0 bits (92), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 50/123 (40%), Gaps = 17/123 (13%)
Query: 3 KLSTALYGHSMDVRSLSVTPDGCILSASRDKSAKLWKPN---------------DLSPGA 47
+ GH VR L++ + LS + D S + W+ +S
Sbjct: 182 RCERTFLGHEDCVRGLAILSETEFLSCANDASIRRWQITGECLEVYFGHTNYIYSISVFP 241
Query: 48 KVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHSE 107
++ + D + ++W + +C TIR ++W L NG IV G +D I++ +E
Sbjct: 242 NSKDFVTTAEDRSLRIW--KHGECAQTIRLPAQSIWCCCVLENGDIVVGASDGIIRVFTE 299
Query: 108 EGE 110
E
Sbjct: 300 SEE 302
>sp|O94289|LUB1_SCHPO Ubiquitin homeostasis protein lub1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=lub1 PE=1 SV=2
Length = 718
Score = 248 bits (633), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 137/379 (36%), Positives = 208/379 (54%), Gaps = 58/379 (15%)
Query: 51 TLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHSEEGE 110
T+++ SWD TA++W L QCK ++ H+ +VW V+ L I +TG ADK IK+ + E +
Sbjct: 116 TIITGSWDSTARVWAL--GQCKYVLKGHQSSVWAVLALGEDIFITGSADKLIKIWNGE-K 172
Query: 111 FLKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAA-- 168
+K++ H DCVR L + F SCSND I++W S G+ ++ ++GH +F+YS+
Sbjct: 173 LVKSILAHNDCVRSLCQI-PGGFASCSNDGVIKLWTSD-GEFLYELHGHTSFVYSLTYIH 230
Query: 169 HGDLITSGGEDQCVCVYQNK-AQNSFMIPAMSVWAVAILPNSDIVTGSSDGIVRVFSANP 227
+ LI S GED+ + +++ K +P SVW+V+ LPN D+V GSS
Sbjct: 231 NQQLIASCGEDRTIRIWKGKECLQCITLPTTSVWSVSSLPNGDLVCGSS----------- 279
Query: 228 DRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPDRQAEDAVQAQYAEE 287
DG VR+F+ + R A V + E
Sbjct: 280 ----------------------------------DGFVRIFTVDKVRVAPTEVLKNFEER 305
Query: 288 VKKLKSANEQEIGGVKVSDLPGKEVLYEPGKADGDVKMVREGSTVVAYSWSEASREWNKL 347
V + + + QE+G +K LPG E+L +PGKADGDV MVR + V AY WS+ EW K+
Sbjct: 306 VSQF-AISSQEVGDIKKGSLPGLEILSKPGKADGDVVMVRVNNDVEAYQWSQKENEWKKI 364
Query: 348 GDVMGSAGGTQESSGKVLYQGKEYDFVFSVDIEEGKPPLKLPYNVSEDPWHAAQAFIHTH 407
G V+ + G + K L++GKEYD+VF VD+ +G+ PLKLPYN +E+P+ AA F+ +
Sbjct: 365 GQVVDAVGNNR----KQLFEGKEYDYVFDVDVADGQAPLKLPYNATENPYQAANRFLELN 420
Query: 408 HLSQMFLEQVANFIMTNSK 426
L + ++V FI N++
Sbjct: 421 QLPLSYTDEVVKFIEKNTQ 439
Score = 82.0 bits (201), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 113/491 (23%), Positives = 202/491 (41%), Gaps = 92/491 (18%)
Query: 2 YKLSTALYGHSMDVRSLSVTPDGCILSASRDKSAKLWKPNDLSPGAKVNTLLSASWDMTA 61
Y+LS L GH DVR + + I SASRD + +W+ ++ W T
Sbjct: 4 YELSRELGGHKQDVRGVCSISNELIGSASRDGTYSVWEQ------------INGEW--TP 49
Query: 62 KLWCLESQQCKLTIRQHEMAVWGVIQL------ANGIIVTGCADKTIKLHSEEGEFLKT- 114
+ HE V V + + G I +G DK L E G +
Sbjct: 50 HFY-----------ENHEGFVNCVCYVPAIDKNSRGYIFSGGQDKCGILQ-EVGTNSPSY 97
Query: 115 -LTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAAHG-DL 172
L GH + + LN ++ S D++ RVW G+C + + GH + +++V A G D+
Sbjct: 98 YLFGHESNICSASALNSETIITGSWDSTARVW--ALGQCKYVLKGHQSSVWAVLALGEDI 155
Query: 173 ITSGGEDQCVCVYQN-KAQNSFMIPAMSVWAVAILPNSDIVTGSSDGIVRVFSANPDRQA 231
+G D+ + ++ K S + V ++ +P + S+DG++++++++ +
Sbjct: 156 FITGSADKLIKIWNGEKLVKSILAHNDCVRSLCQIPGG-FASCSNDGVIKLWTSDGEFLY 214
Query: 232 EDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPDRQAEDAVQAQYAEEVKKL 291
E + + + N+Q I +D +R++ + L
Sbjct: 215 ELHGHTSFVYSLTYIH--NQQLIASC--GEDRTIRIWKGK-----------------ECL 253
Query: 292 KSANEQEIGGVKVSDLPGKEVLYEPGKADGDVKM-----VREGSTVVAYSWSEASREW-- 344
+ VS LP +++ G +DG V++ VR T V ++ E ++
Sbjct: 254 QCITLPTTSVWSVSSLPNGDLVC--GSSDGFVRIFTVDKVRVAPTEVLKNFEERVSQFAI 311
Query: 345 --NKLGDVM-GSAGGTQESSGKVLYQGKEYDFVFSVDIEEGKPPLKLPYNVSEDPWHAAQ 401
++GD+ GS G + S G + D+E + ++ E+ W
Sbjct: 312 SSQEVGDIKKGSLPGLEILSKPGKADGDVVMVRVNNDVEAYQ------WSQKENEWKK-- 363
Query: 402 AFIHTHHLSQMFLEQVANFIMTNSKSKQGPTEYDFVFSVDIEEGKPPLKLPYNVSEDPWH 461
+ QV + + N K EYD+VF VD+ +G+ PLKLPYN +E+P+
Sbjct: 364 ------------IGQVVDAVGNNRKQLFEGKEYDYVFDVDVADGQAPLKLPYNATENPYQ 411
Query: 462 AAQAFIHTHHL 472
AA F+ + L
Sbjct: 412 AANRFLELNQL 422
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 40/66 (60%), Gaps = 5/66 (7%)
Query: 471 HLTSVDIEEGKPPLKLPYNVSEDPWHAAQAFIHTHHLSQMFLEQVANFIMTNSK-----S 525
++ VD+ +G+ PLKLPYN +E+P+ AA F+ + L + ++V FI N++ S
Sbjct: 386 YVFDVDVADGQAPLKLPYNATENPYQAANRFLELNQLPLSYTDEVVKFIEKNTQGHSLES 445
Query: 526 KQGPTV 531
K+ P +
Sbjct: 446 KKEPNL 451
>sp|P36037|DOA1_YEAST Protein DOA1 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=DOA1 PE=1 SV=1
Length = 715
Score = 191 bits (484), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 127/384 (33%), Positives = 198/384 (51%), Gaps = 66/384 (17%)
Query: 52 LLSASWDMTAKLWCLESQQCKLTIRQHEMAVWG--VIQLANGIIVTGCADKTIKLHSEEG 109
++S SWD TAK+W + ++ H +VW V+ + +T ADKTIKL +
Sbjct: 112 VISGSWDKTAKVW--KEGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQND- 168
Query: 110 EFLKTLTG-HTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAA 168
+ +KT +G H D VR LAV++D F+SCSND I++ D TG + T GH +F+Y +
Sbjct: 169 KVIKTFSGIHNDVVRHLAVVDDGHFISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKL 228
Query: 169 --HGDLITSGGEDQCVCVYQNK---AQNSFMIPAMSVWAVAILPNSDIVTGSSDGIVRVF 223
+GD++ S GED+ V ++ + + +PA+S+W+V + N DI+ GSSD
Sbjct: 229 LPNGDIV-SCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSNGDIIVGSSDN----- 282
Query: 224 SANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPDRQA-EDAVQA 282
+VR+FS R A ED +
Sbjct: 283 ----------------------------------------LVRIFSQEKSRWASEDEINE 302
Query: 283 QYAEEVKKLKSANEQEIGGVKVSDLPGKEVLYEPGKADGDVKMVRE-GSTVVAYSWSEAS 341
+ K S+ E K+S E+L PG+ +G + +V+ T+ A+ +S +S
Sbjct: 303 LSTQVEKSTISSKTIEFDESKLSPY---EILQSPGRKEGQIVVVKSPQGTIEAHQFSNSS 359
Query: 342 REWNKLGDVMGSAGGTQESSGKVLYQGKEYDFVFSVDIEEGKPPLKLPYNVSEDPWHAAQ 401
W K+GDV+G+ G + K+ ++GK YD+VF VDIE+GKPPLKLP NVS++P+ AA
Sbjct: 360 --WKKVGDVVGA--GATGNDKKIEFEGKTYDYVFDVDIEDGKPPLKLPINVSDNPYTAAD 415
Query: 402 AFIHTHHLSQMFLEQVANFIMTNS 425
F+ + L + +QV FI+ N+
Sbjct: 416 NFLARYELPMSYRDQVVQFILKNT 439
Score = 75.5 bits (184), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 120/509 (23%), Positives = 198/509 (38%), Gaps = 126/509 (24%)
Query: 2 YKLSTALYGHSMDVRSLSVTPDGCILSASRDKSAKLWKPNDLSPGAKVNT----LLSASW 57
Y+LS L GH DVR + D + S SRD + +LW +D G V T L S +
Sbjct: 3 YQLSATLKGHDQDVRDVVAVDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCY 62
Query: 58 DMTAKLWCLESQQCKL---------------TIRQHEMAVWGVIQLANGIIVTGCADKTI 102
D +L + + T+ H+ V + +G++++G DKT
Sbjct: 63 DSEKELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVCS-LSFQDGVVISGSWDKTA 121
Query: 103 KLHSEEGEFLKTLTGHTDCVRGLAVLN--DTDFVSCSNDASIRVWDSTTGKCVHTMYGHP 160
K+ +EG + L H V V++ + F++ S D +I++W + K + T G
Sbjct: 122 KVW-KEGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQN--DKVIKTFSG-- 176
Query: 161 NFIYSVAAHGDLITSGGEDQCVCVYQNKAQNSFMIPAMSVWAVAILPNSDIVTGSSDGIV 220
H D++ +A++ + ++ S+DG++
Sbjct: 177 -------IHNDVVRH---------------------------LAVVDDGHFISCSNDGLI 202
Query: 221 RVFSANPDRQAEDAVQAQYAEE--VKKLKSANEQEIGGVKVSDDGIVRVFSANPDRQAED 278
++ D D ++ E V +K +I V +D VR++S
Sbjct: 203 KLV----DMHTGDVLRTYEGHESFVYCIKLLPNGDI--VSCGEDRTVRIWS--------- 247
Query: 279 AVQAQYAEEVKKLKSANEQEIGGVK-VSDLPGKEVLYEPGKADGDVKMVREGSTVVAYSW 337
+E G +K V LP + ++GD+ + + V +S
Sbjct: 248 ------------------KENGSLKQVITLPAISIWSVDCMSNGDIIVGSSDNLVRIFS- 288
Query: 338 SEASREWNKLGDVMGSAGGTQESSGKVLYQGKEYDFVFSVDIEEGKPPLKLPYNVSEDPW 397
E SR W S E S +V E + S IE + L PY + + P
Sbjct: 289 QEKSR-W-------ASEDEINELSTQV-----EKSTISSKTIEFDESKLS-PYEILQSPG 334
Query: 398 H---------AAQAFIHTHHLSQMFLEQVANFIMTNSKSKQGPTE-----YDFVFSVDIE 443
+ Q I H S ++V + + + E YD+VF VDIE
Sbjct: 335 RKEGQIVVVKSPQGTIEAHQFSNSSWKKVGDVVGAGATGNDKKIEFEGKTYDYVFDVDIE 394
Query: 444 EGKPPLKLPYNVSEDPWHAAQAFIHTHHL 472
+GKPPLKLP NVS++P+ AA F+ + L
Sbjct: 395 DGKPPLKLPINVSDNPYTAADNFLARYEL 423
Score = 59.3 bits (142), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 37/53 (69%)
Query: 471 HLTSVDIEEGKPPLKLPYNVSEDPWHAAQAFIHTHHLSQMFLEQVANFIMTNS 523
++ VDIE+GKPPLKLP NVS++P+ AA F+ + L + +QV FI+ N+
Sbjct: 387 YVFDVDIEDGKPPLKLPINVSDNPYTAADNFLARYELPMSYRDQVVQFILKNT 439
>sp|Q8YV57|Y2124_NOSS1 Uncharacterized WD repeat-containing protein all2124 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=all2124 PE=4 SV=1
Length = 1683
Score = 102 bits (253), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 82/248 (33%), Positives = 119/248 (47%), Gaps = 29/248 (11%)
Query: 3 KLSTALYGHSMDVRSLSVTPDG-CILSASRDKSAKLWKPND------------------L 43
+L L GH V S+S +PDG I S DK+ KLW+ +D
Sbjct: 1104 RLFRTLNGHEDAVYSVSFSPDGQTIASGGSDKTIKLWQTSDGTLLKTITGHEQTVNNVYF 1163
Query: 44 SPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTI 102
SP K L SAS D + KLW S Q +T+ H V V +G I G DKT+
Sbjct: 1164 SPDGK--NLASASSDHSIKLWDTTSGQLLMTLTGHSAGVITVRFSPDGQTIAAGSEDKTV 1221
Query: 103 KL-HSEEGEFLKTLTGHTDCVRGLAVLND-TDFVSCSNDASIRVWDSTTGKCVHTMYGHP 160
KL H ++G+ LKTL GH D V L+ D S S D +I++W GK V T+ GH
Sbjct: 1222 KLWHRQDGKLLKTLNGHQDWVNSLSFSPDGKTLASASADKTIKLWRIADGKLVKTLKGHN 1281
Query: 161 NFIYSV--AAHGDLITSGGEDQCVCVYQNKA--QNSFMIPAMSVWAVAILPNSDIVTGSS 216
+ ++ V ++ G I S D + ++ +F + V+AV LP+S+I+ +S
Sbjct: 1282 DSVWDVNFSSDGKAIASASRDNTIKLWNRHGIELETFTGHSGGVYAVNFLPDSNIIASAS 1341
Query: 217 -DGIVRVF 223
D +R++
Sbjct: 1342 LDNTIRLW 1349
Score = 87.4 bits (215), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 114/244 (46%), Gaps = 36/244 (14%)
Query: 7 ALYGHSMDVRSLSVTPDG-CILSASRDKSAKLWKPND------------------LSPGA 47
A+YG +S TP G I SA+ DK+ K+W+ D SP
Sbjct: 1406 AIYG-------ISFTPQGDLIASANADKTVKIWRVRDGKALKTLIGHDNEVNKVNFSPDG 1458
Query: 48 KVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKL-H 105
K TL SAS D T KLW + + K T++ H V+ V +G II + ADKTI+L
Sbjct: 1459 K--TLASASRDNTVKLWNVSDGKFKKTLKGHTDEVFWVSFSPDGKIIASASADKTIRLWD 1516
Query: 106 SEEGEFLKTLTGHTDCVRGLAVLNDTDFV-SCSNDASIRVWDSTTGKCVHTMYGHPNFIY 164
S G +K+L H D V + D + S S D ++++W S G +HT GH N +Y
Sbjct: 1517 SFSGNLIKSLPAHNDLVYSVNFNPDGSMLASTSADKTVKLWRSHDGHLLHTFSGHSNVVY 1576
Query: 165 --SVAAHGDLITSGGEDQCVCVYQNKAQNSFMIPAMSVWAVAILPNSD---IVTGSSDGI 219
S + G I S ED+ V ++Q +P ++ + + D +++GS D
Sbjct: 1577 SSSFSPDGRYIASASEDKTVKIWQIDGHLLTTLPQHQAGVMSAIFSPDGKTLISGSLDTT 1636
Query: 220 VRVF 223
+++
Sbjct: 1637 TKIW 1640
Score = 85.1 bits (209), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 133/290 (45%), Gaps = 48/290 (16%)
Query: 3 KLSTALYGHSMDVRSLSVTPDG-CILSASRDKSAKLWKPND------------------L 43
+L L GHS V ++ +PDG I + S DK+ KLW D
Sbjct: 1188 QLLMTLTGHSAGVITVRFSPDGQTIAAGSEDKTVKLWHRQDGKLLKTLNGHQDWVNSLSF 1247
Query: 44 SPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTI 102
SP K TL SAS D T KLW + + T++ H +VW V ++G I + D TI
Sbjct: 1248 SPDGK--TLASASADKTIKLWRIADGKLVKTLKGHNDSVWDVNFSSDGKAIASASRDNTI 1305
Query: 103 KLHSEEGEFLKTLTGHTDCVRGLAVLNDTDFV-SCSNDASIRVWDSTTGKCVHTMYGHPN 161
KL + G L+T TGH+ V + L D++ + S S D +IR+W + + G+
Sbjct: 1306 KLWNRHGIELETFTGHSGGVYAVNFLPDSNIIASASLDNTIRLWQRPLISPLEVLAGNSG 1365
Query: 162 FIYSVAA--HGDLITSGGEDQCVCVYQNKAQNSFMIPAM----SVWAVAILPNSDIVTGS 215
+Y+V+ G +I + G D + ++ +Q+ ++ + +++ ++ P D++
Sbjct: 1366 -VYAVSFLHDGSIIATAGADGNIQLWH--SQDGSLLKTLPGNKAIYGISFTPQGDLIA-- 1420
Query: 216 SDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKS--ANEQEIGGVKVSDDG 263
SAN D+ V+ + K LK+ ++ E+ V S DG
Sbjct: 1421 --------SANADK----TVKIWRVRDGKALKTLIGHDNEVNKVNFSPDG 1458
Score = 67.4 bits (163), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 97/194 (50%), Gaps = 21/194 (10%)
Query: 15 VRSLSVTPDGCIL-SASRDKSAKLWKPNDLS-----PGAKV----------NTLLSASWD 58
V ++S DG I+ +A D + +LW D S PG K + + SA+ D
Sbjct: 1366 VYAVSFLHDGSIIATAGADGNIQLWHSQDGSLLKTLPGNKAIYGISFTPQGDLIASANAD 1425
Query: 59 MTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKL-HSEEGEFLKTLT 116
T K+W + + T+ H+ V V +G + + D T+KL + +G+F KTL
Sbjct: 1426 KTVKIWRVRDGKALKTLIGHDNEVNKVNFSPDGKTLASASRDNTVKLWNVSDGKFKKTLK 1485
Query: 117 GHTDCVRGLAVLNDTDFV-SCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAAH--GDLI 173
GHTD V ++ D + S S D +IR+WDS +G + ++ H + +YSV + G ++
Sbjct: 1486 GHTDEVFWVSFSPDGKIIASASADKTIRLWDSFSGNLIKSLPAHNDLVYSVNFNPDGSML 1545
Query: 174 TSGGEDQCVCVYQN 187
S D+ V ++++
Sbjct: 1546 ASTSADKTVKLWRS 1559
Score = 56.2 bits (134), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 84/183 (45%), Gaps = 30/183 (16%)
Query: 93 IVTGCADKTIKLHSEEGEFLKTLTGHTDCVRGLAVLNDTDFV-SCSNDASIRVWDSTTGK 151
I +G DKTIKL S +G +TL GH D V ++ D + S +D +I++W ++ G
Sbjct: 1087 IASGSLDKTIKLWSRDGRLFRTLNGHEDAVYSVSFSPDGQTIASGGSDKTIKLWQTSDGT 1146
Query: 152 CVHTMYGHPNFIYSV--AAHGDLITSGGEDQCVCVYQNKAQNSFMIPAMSVWAVAILPNS 209
+ T+ GH + +V + G + S D + ++ + M
Sbjct: 1147 LLKTITGHEQTVNNVYFSPDGKNLASASSDHSIKLWDTTSGQLLM--------------- 1191
Query: 210 DIVTGSSDGIVRV-FSANPDRQ-----AED-AVQAQYAEEVKKLKSANEQE--IGGVKVS 260
+TG S G++ V FS PD Q +ED V+ + ++ K LK+ N + + + S
Sbjct: 1192 -TLTGHSAGVITVRFS--PDGQTIAAGSEDKTVKLWHRQDGKLLKTLNGHQDWVNSLSFS 1248
Query: 261 DDG 263
DG
Sbjct: 1249 PDG 1251
Score = 49.7 bits (117), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 66/162 (40%), Gaps = 19/162 (11%)
Query: 3 KLSTALYGHSMDVRSLSVTPDGCIL-SASRDKSAKLWKP------------NDLSPGAKV 49
K L GH+ +V +S +PDG I+ SAS DK+ +LW NDL
Sbjct: 1479 KFKKTLKGHTDEVFWVSFSPDGKIIASASADKTIRLWDSFSGNLIKSLPAHNDLVYSVNF 1538
Query: 50 N----TLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKL 104
N L S S D T KLW T H V+ +G I + DKT+K+
Sbjct: 1539 NPDGSMLASTSADKTVKLWRSHDGHLLHTFSGHSNVVYSSSFSPDGRYIASASEDKTVKI 1598
Query: 105 HSEEGEFLKTLTGHTDCVRGLAVLND-TDFVSCSNDASIRVW 145
+G L TL H V D +S S D + ++W
Sbjct: 1599 WQIDGHLLTTLPQHQAGVMSAIFSPDGKTLISGSLDTTTKIW 1640
Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 40/81 (49%), Gaps = 20/81 (24%)
Query: 10 GHSMDVRSLSVTPDG-CILSASRDKSAKLWKPND-----------------LSPGAKVNT 51
GHS V S S +PDG I SAS DK+ K+W+ + SP K T
Sbjct: 1570 GHSNVVYSSSFSPDGRYIASASEDKTVKIWQIDGHLLTTLPQHQAGVMSAIFSPDGK--T 1627
Query: 52 LLSASWDMTAKLWCLESQQCK 72
L+S S D T K+W +SQQ K
Sbjct: 1628 LISGSLDTTTKIWRFDSQQAK 1648
>sp|Q8YRI1|YY46_NOSS1 Uncharacterized WD repeat-containing protein alr3466 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=alr3466 PE=4 SV=1
Length = 1526
Score = 96.3 bits (238), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 121/243 (49%), Gaps = 32/243 (13%)
Query: 10 GHSMDVRSLSVTPDGCIL-SASRDKSAKLWKPNDLSPGAKVNT----------------- 51
GH+ V S+ + DG +L S S D++ +LW D+S G + T
Sbjct: 904 GHNSWVNSVGFSQDGKMLASGSDDQTVRLW---DISSGQCLKTFKGHTSRVRSVVFSPNS 960
Query: 52 --LLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGV-IQLANGIIVTGCADKTIKLHS-E 107
L S S D T +LW + S +C + H V+ V L ++ TG D+T++L
Sbjct: 961 LMLASGSSDQTVRLWDISSGECLYIFQGHTGWVYSVAFNLDGSMLATGSGDQTVRLWDIS 1020
Query: 108 EGEFLKTLTGHTDCVRGLAVLNDTDFV-SCSNDASIRVWDSTTGKCVHTMYGHPNFIYSV 166
+ GHT CVR + +D + S S+D ++R+WD ++G C++T+ GH + + SV
Sbjct: 1021 SSQCFYIFQGHTSCVRSVVFSSDGAMLASGSDDQTVRLWDISSGNCLYTLQGHTSCVRSV 1080
Query: 167 --AAHGDLITSGGEDQCVCVYQNKAQNS-FMIPAMSVWAVAIL--PNS-DIVTGSSDGIV 220
+ G ++ SGG+DQ V ++ + N + + + W ++ PN + GSSD IV
Sbjct: 1081 VFSPDGAMLASGGDDQIVRLWDISSGNCLYTLQGYTSWVRFLVFSPNGVTLANGSSDQIV 1140
Query: 221 RVF 223
R++
Sbjct: 1141 RLW 1143
Score = 88.6 bits (218), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 106/203 (52%), Gaps = 26/203 (12%)
Query: 10 GHSMDVRSLSVTPDGCIL-SASRDKSAKLWKPND------------------LSPGAKVN 50
GH+ V S++ PDG +L S S D++ +LW+ + SP +
Sbjct: 1282 GHTNWVNSVAFNPDGSMLASGSGDQTVRLWEISSSKCLHTFQGHTSWVSSVTFSPDGTM- 1340
Query: 51 TLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHS-EE 108
L S S D T +LW + S +C T H V VI +G I+ +G D+T++L S
Sbjct: 1341 -LASGSDDQTVRLWSISSGECLYTFLGHTNWVGSVIFSPDGAILASGSGDQTVRLWSISS 1399
Query: 109 GEFLKTLTGHTDCVRGLAVLND-TDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVA 167
G+ L TL GH + V + D T S S+D ++R+W+ ++G+C++T++GH N + SVA
Sbjct: 1400 GKCLYTLQGHNNWVGSIVFSPDGTLLASGSDDQTVRLWNISSGECLYTLHGHINSVRSVA 1459
Query: 168 AHGD--LITSGGEDQCVCVYQNK 188
D ++ SG +D+ + ++ K
Sbjct: 1460 FSSDGLILASGSDDETIKLWDVK 1482
Score = 85.9 bits (211), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 121/243 (49%), Gaps = 26/243 (10%)
Query: 8 LYGHSMDVRSLSVTPDGCILS-ASRDKSAKLWK----------------PNDLSPGAKVN 50
L G++ VR L +P+G L+ S D+ +LW N ++
Sbjct: 1112 LQGYTSWVRFLVFSPNGVTLANGSSDQIVRLWDISSKKCLYTLQGHTNWVNAVAFSPDGA 1171
Query: 51 TLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKL-HSEE 108
TL S S D T +LW + S +C ++ H V V+ +G + +G +D+T++L
Sbjct: 1172 TLASGSGDQTVRLWDISSSKCLYILQGHTSWVNSVVFNPDGSTLASGSSDQTVRLWEINS 1231
Query: 109 GEFLKTLTGHTDCVRGLAVLNDTDFV-SCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVA 167
+ L T GHT V + D + S S+D ++R+WD ++ KC+HT GH N++ SVA
Sbjct: 1232 SKCLCTFQGHTSWVNSVVFNPDGSMLASGSSDKTVRLWDISSSKCLHTFQGHTNWVNSVA 1291
Query: 168 AH--GDLITSGGEDQCVCVYQ---NKAQNSFMIPAMSVWAVAILPNSDIV-TGSSDGIVR 221
+ G ++ SG DQ V +++ +K ++F V +V P+ ++ +GS D VR
Sbjct: 1292 FNPDGSMLASGSGDQTVRLWEISSSKCLHTFQGHTSWVSSVTFSPDGTMLASGSDDQTVR 1351
Query: 222 VFS 224
++S
Sbjct: 1352 LWS 1354
Score = 79.0 bits (193), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 108/225 (48%), Gaps = 34/225 (15%)
Query: 8 LYGHSMDVRSLSVTPDGCILSASRDKSAKLWKPNDLSPGAKVNTLLSASWDMTAKLWCLE 67
L GH+ VRS+ +PDG +L++ D D +LW +
Sbjct: 1070 LQGHTSCVRSVVFSPDGAMLASGGD-------------------------DQIVRLWDIS 1104
Query: 68 SQQCKLTIRQHEMAVWGVIQLANGI-IVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGL 125
S C T++ + V ++ NG+ + G +D+ ++L + L TL GHT+ V +
Sbjct: 1105 SGNCLYTLQGYTSWVRFLVFSPNGVTLANGSSDQIVRLWDISSKKCLYTLQGHTNWVNAV 1164
Query: 126 AVLND-TDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAAH--GDLITSGGEDQCV 182
A D S S D ++R+WD ++ KC++ + GH +++ SV + G + SG DQ V
Sbjct: 1165 AFSPDGATLASGSGDQTVRLWDISSSKCLYILQGHTSWVNSVVFNPDGSTLASGSSDQTV 1224
Query: 183 CVYQ-NKAQNSFMIPAMSVWAVAILPNSD---IVTGSSDGIVRVF 223
+++ N ++ + W +++ N D + +GSSD VR++
Sbjct: 1225 RLWEINSSKCLCTFQGHTSWVNSVVFNPDGSMLASGSSDKTVRLW 1269
Score = 77.4 bits (189), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 89/170 (52%), Gaps = 26/170 (15%)
Query: 10 GHSMDVRSLSVTPDGCIL-SASRDKSAKLWKPNDLSPGAKVNTLL--------------- 53
GH+ V S++ +PDG +L S S D++ +LW +S G + T L
Sbjct: 1324 GHTSWVSSVTFSPDGTMLASGSDDQTVRLWS---ISSGECLYTFLGHTNWVGSVIFSPDG 1380
Query: 54 ----SASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKL-HSE 107
S S D T +LW + S +C T++ H V ++ +G ++ +G D+T++L +
Sbjct: 1381 AILASGSGDQTVRLWSISSGKCLYTLQGHNNWVGSIVFSPDGTLLASGSDDQTVRLWNIS 1440
Query: 108 EGEFLKTLTGHTDCVRGLAVLND-TDFVSCSNDASIRVWDSTTGKCVHTM 156
GE L TL GH + VR +A +D S S+D +I++WD TG+C+ T+
Sbjct: 1441 SGECLYTLHGHINSVRSVAFSSDGLILASGSDDETIKLWDVKTGECIKTL 1490
Score = 42.0 bits (97), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 52/97 (53%), Gaps = 6/97 (6%)
Query: 133 FVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSV--AAHGDLITSGGEDQCVCVY---QN 187
F + + +R W++ TGK + T GH +++ SV + G ++ SG +DQ V ++
Sbjct: 879 FATGDSGGIVRFWEAATGKELLTCKGHNSWVNSVGFSQDGKMLASGSDDQTVRLWDISSG 938
Query: 188 KAQNSFMIPAMSVWAVAILPNSDIV-TGSSDGIVRVF 223
+ +F V +V PNS ++ +GSSD VR++
Sbjct: 939 QCLKTFKGHTSRVRSVVFSPNSLMLASGSSDQTVRLW 975
Score = 40.8 bits (94), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 52/110 (47%), Gaps = 27/110 (24%)
Query: 8 LYGHSMDVRSLSVTPDGCILSASRDKSAKLWKPNDLSPGAKVNTLLSASWDMTAKLWCLE 67
L GH+ V S+ +PDG +L++ D D T +LW +
Sbjct: 1406 LQGHNNWVGSIVFSPDGTLLASGSD-------------------------DQTVRLWNIS 1440
Query: 68 SQQCKLTIRQHEMAVWGVIQLANGIIV-TGCADKTIKLHS-EEGEFLKTL 115
S +C T+ H +V V ++G+I+ +G D+TIKL + GE +KTL
Sbjct: 1441 SGECLYTLHGHINSVRSVAFSSDGLILASGSDDETIKLWDVKTGECIKTL 1490
Score = 33.9 bits (76), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 29/48 (60%), Gaps = 4/48 (8%)
Query: 8 LYGHSMDVRSLSVTPDGCIL-SASRDKSAKLWKPNDLSPGAKVNTLLS 54
L+GH VRS++ + DG IL S S D++ KLW D+ G + TL S
Sbjct: 1448 LHGHINSVRSVAFSSDGLILASGSDDETIKLW---DVKTGECIKTLKS 1492
>sp|B5X3Z6|LIS1A_SALSA Lissencephaly-1 homolog A OS=Salmo salar GN=pafah1b1-1 PE=2 SV=1
Length = 410
Score = 94.7 bits (234), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 112/229 (48%), Gaps = 42/229 (18%)
Query: 2 YKLSTALYGHSMDVRSLSVTPDG-CILSASRDKSAKLWKP----------------NDLS 44
++ ++GH +V S+++ P+G I+SASRDK+ K+W+ +
Sbjct: 182 FECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMVR 241
Query: 45 PGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAV----WG------VIQLANG--- 91
P + S S D T ++W + S++CK +R+HE V W I A G
Sbjct: 242 PNQDGTLIASCSNDQTVRVWVVASKECKAELREHEHVVECISWAPESAHPTILEATGSES 301
Query: 92 --------IIVTGCADKTIKLHSEE-GEFLKTLTGHTDCVRGLAVLNDTDFV-SCSNDAS 141
+++G DKTIK+ G L TL GH + VRG+ V F+ SC++D +
Sbjct: 302 KKSGKPGPFLLSGSRDKTIKMWDVSIGMCLMTLVGHDNWVRGMLVHPGGKFILSCADDKT 361
Query: 142 IRVWDSTTGKCVHTMYGHPNFIYSVAAHGD--LITSGGEDQCVCVYQNK 188
+R+WD +C+ T+ H +F+ S+ H + + +G DQ V V++ +
Sbjct: 362 LRIWDYKNKRCMKTLGAHEHFVTSLDFHKNAPYVVTGSVDQTVKVWECR 410
Score = 68.9 bits (167), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 77/142 (54%), Gaps = 12/142 (8%)
Query: 92 IIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDTDFV-SCSNDASIRVWDSTT 149
++V+ D TIK+ E G+F +TL GHTD V+ ++ + + SCS D +I++WD
Sbjct: 122 VMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQG 181
Query: 150 GKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQNSFMIPAMS---VWAVA 204
+C+ TM+GH + + SVA +GD I S D+ + +++ + + + W
Sbjct: 182 FECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE--VATGYCVKTFTGHREWVRM 239
Query: 205 ILPNSD---IVTGSSDGIVRVF 223
+ PN D I + S+D VRV+
Sbjct: 240 VRPNQDGTLIASCSNDQTVRVW 261
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 91/198 (45%), Gaps = 25/198 (12%)
Query: 7 ALYGHSMDVRSLSVTPDGCIL-SASRDKSAKLW--KPNDLSPGAKVNT------------ 51
AL GH V + P ++ SAS D + K+W + D K +T
Sbjct: 103 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHTG 162
Query: 52 --LLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGI-IVTGCADKTIKL-HSE 107
L S S DMT KLW + +C T+ H+ V V + NG IV+ DKTIK+
Sbjct: 163 KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVA 222
Query: 108 EGEFLKTLTGHTDCVRGLAVLND-TDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSV 166
G +KT TGH + VR + D T SCSND ++RVW + +C + H + + +
Sbjct: 223 TGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVASKECKAELREHEHVVECI 282
Query: 167 -----AAHGDLITSGGED 179
+AH ++ + G +
Sbjct: 283 SWAPESAHPTILEATGSE 300
>sp|Q6NZH4|LIS1_XENTR Lissencephaly-1 homolog OS=Xenopus tropicalis GN=pafah1b1 PE=2 SV=3
Length = 410
Score = 93.6 bits (231), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 110/229 (48%), Gaps = 42/229 (18%)
Query: 2 YKLSTALYGHSMDVRSLSVTPDG-CILSASRDKSAKLWKPND----------------LS 44
++ ++GH +V S+++ P+G I+SASRDK+ K+W+ +
Sbjct: 182 FECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVR 241
Query: 45 PGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAV----------WGVIQLANG--- 91
P + S S D T ++W + +++CK +R+HE V + I A G
Sbjct: 242 PNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSTISDATGSET 301
Query: 92 --------IIVTGCADKTIKLHSEE-GEFLKTLTGHTDCVRGLAVLNDTDFV-SCSNDAS 141
+++G DKTIK+ G L TL GH + VRG+ F+ SC++D +
Sbjct: 302 KKSGKPGPFLLSGSRDKTIKMWDISIGMCLMTLVGHDNWVRGVQFHPGGKFILSCADDKT 361
Query: 142 IRVWDSTTGKCVHTMYGHPNFIYSVAAH--GDLITSGGEDQCVCVYQNK 188
IR+WD +C+ T+ H +F+ S+ H + +G DQ V V++ +
Sbjct: 362 IRIWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 73.2 bits (178), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 78/142 (54%), Gaps = 12/142 (8%)
Query: 92 IIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDTDFV-SCSNDASIRVWDSTT 149
++VT D TIK+ E G+F +TL GHTD V+ ++ + + SCS D +I++WD
Sbjct: 122 VMVTASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQG 181
Query: 150 GKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQNSFMIPAMS---VWAVA 204
+C+ TM+GH + + SVA +GD I S D+ + +++ Q + + + W
Sbjct: 182 FECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE--VQTGYCVKTFTGHREWVRM 239
Query: 205 ILPNSD---IVTGSSDGIVRVF 223
+ PN D I + S+D VRV+
Sbjct: 240 VRPNQDGTLIASCSNDQTVRVW 261
Score = 69.7 bits (169), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 83/181 (45%), Gaps = 20/181 (11%)
Query: 7 ALYGHSMDVRSLSVTPDGCIL-SASRDKSAKLW----------------KPNDLSPGAKV 49
AL GH V + P ++ +AS D + K+W D+S
Sbjct: 103 ALSGHRSPVTRVIFHPVFSVMVTASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSG 162
Query: 50 NTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGI-IVTGCADKTIKL-HSE 107
L S S DMT KLW + +C T+ H+ V V + NG IV+ DKTIK+ +
Sbjct: 163 KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQ 222
Query: 108 EGEFLKTLTGHTDCVRGLAVLND-TDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSV 166
G +KT TGH + VR + D T SCSND ++RVW T +C + H + + +
Sbjct: 223 TGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECI 282
Query: 167 A 167
+
Sbjct: 283 S 283
>sp|Q5IS43|LIS1_PANTR Platelet-activating factor acetylhydrolase IB subunit alpha OS=Pan
troglodytes GN=PAFAH1B1 PE=2 SV=3
Length = 410
Score = 93.6 bits (231), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 111/229 (48%), Gaps = 42/229 (18%)
Query: 2 YKLSTALYGHSMDVRSLSVTPDG-CILSASRDKSAKLWKPND----------------LS 44
++ ++GH +V S+++ P+G I+SASRDK+ K+W+ +
Sbjct: 182 FECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVR 241
Query: 45 PGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAV----------WGVIQLANG--- 91
P + S S D T ++W + +++CK +R+HE V + I A G
Sbjct: 242 PNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSET 301
Query: 92 --------IIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDTDFV-SCSNDAS 141
+++G DKTIK+ G L TL GH + VRG+ + F+ SC++D +
Sbjct: 302 KKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKT 361
Query: 142 IRVWDSTTGKCVHTMYGHPNFIYSVAAH--GDLITSGGEDQCVCVYQNK 188
+RVWD +C+ T+ H +F+ S+ H + +G DQ V V++ +
Sbjct: 362 LRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGFVDQTVKVWECR 410
Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 78/142 (54%), Gaps = 12/142 (8%)
Query: 92 IIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDTDFV-SCSNDASIRVWDSTT 149
++V+ D TIK+ E G+F +TL GHTD V+ ++ + + SCS D +I++WD
Sbjct: 122 VMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQG 181
Query: 150 GKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQNSFMIPAMS---VWAVA 204
+C+ TM+GH + + SVA +GD I S D+ + +++ Q + + + W
Sbjct: 182 FECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE--VQTGYCVKTFTGHREWVRM 239
Query: 205 ILPNSD---IVTGSSDGIVRVF 223
+ PN D I + S+D VRV+
Sbjct: 240 VRPNQDGTLIASCSNDQTVRVW 261
Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 83/181 (45%), Gaps = 20/181 (11%)
Query: 7 ALYGHSMDVRSLSVTPDGCIL-SASRDKSAKLW----------------KPNDLSPGAKV 49
AL GH V + P ++ SAS D + K+W D+S
Sbjct: 103 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSG 162
Query: 50 NTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGI-IVTGCADKTIKL-HSE 107
L S S DMT KLW + +C T+ H+ V V + NG IV+ DKTIK+ +
Sbjct: 163 KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQ 222
Query: 108 EGEFLKTLTGHTDCVRGLAVLND-TDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSV 166
G +KT TGH + VR + D T SCSND ++RVW T +C + H + + +
Sbjct: 223 TGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECI 282
Query: 167 A 167
+
Sbjct: 283 S 283
>sp|Q803D2|LIS1B_DANRE Lissencephaly-1 homolog B OS=Danio rerio GN=pafah1b1b PE=2 SV=3
Length = 410
Score = 93.6 bits (231), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 110/229 (48%), Gaps = 42/229 (18%)
Query: 2 YKLSTALYGHSMDVRSLSVTPDG-CILSASRDKSAKLWKPND----------------LS 44
++ ++GH +V S+++ P+G I+SASRDK+ K+W+ +
Sbjct: 182 FECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWEVATGYCVKTFTGHREWVRMVR 241
Query: 45 PGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAV----WG------VIQLANG--- 91
P L S S D T ++W + +++CK +R+HE V W I A G
Sbjct: 242 PNQDGTLLASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESAHPTISEATGSEN 301
Query: 92 --------IIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDTDF-VSCSNDAS 141
+++G DKTIK+ G L TL GH + VRG+ F VSC++D +
Sbjct: 302 KKSGKPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHPGGRFVVSCADDKT 361
Query: 142 IRVWDSTTGKCVHTMYGHPNFIYSVAAH--GDLITSGGEDQCVCVYQNK 188
+R+WD +C+ T+ H +F+ S+ H + +G DQ V V++ +
Sbjct: 362 LRIWDYKNKRCMKTLSAHEHFVTSLDFHKASPYVVTGSVDQTVKVWECR 410
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 82/181 (45%), Gaps = 20/181 (11%)
Query: 7 ALYGHSMDVRSLSVTPD-GCILSASRDKSAKLW----------------KPNDLSPGAKV 49
AL GH V + P ++SAS D + K+W D+S
Sbjct: 103 ALSGHRSPVTRVIFHPVFSLMVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQTG 162
Query: 50 NTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGI-IVTGCADKTIKL-HSE 107
L S S DMT KLW + +C T+ H+ V V + NG IV+ DKT+K+
Sbjct: 163 KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWEVA 222
Query: 108 EGEFLKTLTGHTDCVRGLAVLND-TDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSV 166
G +KT TGH + VR + D T SCSND ++RVW T +C + H + + +
Sbjct: 223 TGYCVKTFTGHREWVRMVRPNQDGTLLASCSNDQTVRVWVVATKECKAELREHEHVVECI 282
Query: 167 A 167
+
Sbjct: 283 S 283
Score = 66.6 bits (161), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 76/142 (53%), Gaps = 12/142 (8%)
Query: 92 IIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDTDFV-SCSNDASIRVWDSTT 149
++V+ D TIK+ E G+F +TL GHTD V+ ++ + SCS D +I++WD
Sbjct: 122 LMVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQTGKLLASCSADMTIKLWDFQG 181
Query: 150 GKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQNSFMIPAMS---VWAVA 204
+C+ TM+GH + + SVA +GD I S D+ + +++ + + + W
Sbjct: 182 FECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWE--VATGYCVKTFTGHREWVRM 239
Query: 205 ILPNSD---IVTGSSDGIVRVF 223
+ PN D + + S+D VRV+
Sbjct: 240 VRPNQDGTLLASCSNDQTVRVW 261
>sp|Q90ZL4|LIS1_XENLA Lissencephaly-1 homolog OS=Xenopus laevis GN=pafah1b1 PE=2 SV=3
Length = 410
Score = 93.6 bits (231), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 110/229 (48%), Gaps = 42/229 (18%)
Query: 2 YKLSTALYGHSMDVRSLSVTPDG-CILSASRDKSAKLWKPND----------------LS 44
++ ++GH +V S+++ P+G I+SASRDK+ K+W+ +
Sbjct: 182 FECLRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVR 241
Query: 45 PGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAV----------WGVIQLANG--- 91
P + S S D T ++W + +++CK +R+HE V + I A G
Sbjct: 242 PNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSTISDATGSET 301
Query: 92 --------IIVTGCADKTIKLHSEE-GEFLKTLTGHTDCVRGLAVLNDTDFV-SCSNDAS 141
+++G DKTIK+ G L TL GH + VRG+ F+ SC++D +
Sbjct: 302 KRSGKPGPFLLSGSRDKTIKMWDISIGMCLMTLVGHDNWVRGVQFHPGGKFILSCADDKT 361
Query: 142 IRVWDSTTGKCVHTMYGHPNFIYSVAAH--GDLITSGGEDQCVCVYQNK 188
IR+WD +C+ T+ H +F+ S+ H + +G DQ V V++ +
Sbjct: 362 IRIWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 72.4 bits (176), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 78/142 (54%), Gaps = 12/142 (8%)
Query: 92 IIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDTDFV-SCSNDASIRVWDSTT 149
++VT D TIK+ E G+F +TL GHTD V+ ++ + + SCS D +I++WD
Sbjct: 122 VMVTASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQG 181
Query: 150 GKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQNSFMIPAMS---VWAVA 204
+C+ TM+GH + + SVA +GD I S D+ + +++ Q + + + W
Sbjct: 182 FECLRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE--VQTGYCVKTFTGHREWVRM 239
Query: 205 ILPNSD---IVTGSSDGIVRVF 223
+ PN D I + S+D VRV+
Sbjct: 240 VRPNQDGTLIASCSNDQTVRVW 261
Score = 69.7 bits (169), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 83/181 (45%), Gaps = 20/181 (11%)
Query: 7 ALYGHSMDVRSLSVTPDGCIL-SASRDKSAKLW----------------KPNDLSPGAKV 49
AL GH V + P ++ +AS D + K+W D+S
Sbjct: 103 ALSGHRSPVTRVIFHPVFSVMVTASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSG 162
Query: 50 NTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGI-IVTGCADKTIKL-HSE 107
L S S DMT KLW + +C T+ H+ V V + NG IV+ DKTIK+ +
Sbjct: 163 KLLASCSADMTIKLWDFQGFECLRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQ 222
Query: 108 EGEFLKTLTGHTDCVRGLAVLND-TDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSV 166
G +KT TGH + VR + D T SCSND ++RVW T +C + H + + +
Sbjct: 223 TGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECI 282
Query: 167 A 167
+
Sbjct: 283 S 283
>sp|Q7T394|LIS1A_DANRE Lissencephaly-1 homolog A OS=Danio rerio GN=pafah1b1a PE=2 SV=3
Length = 410
Score = 92.4 bits (228), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 111/229 (48%), Gaps = 42/229 (18%)
Query: 2 YKLSTALYGHSMDVRSLSVTPDG-CILSASRDKSAKLWKPND----------------LS 44
++ ++GH +V S+++ P+G I+SASRDK+ K+W+ +
Sbjct: 182 FECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMVR 241
Query: 45 PGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAV----WG------VIQLANG--- 91
P + S+S D T ++W + +++CK +R+HE V W I A G
Sbjct: 242 PNQDGTLIASSSNDQTVRVWVVATKECKAELREHEHVVECISWAPESAHPTILEATGSET 301
Query: 92 --------IIVTGCADKTIKLHSEE-GEFLKTLTGHTDCVRGLAVLNDTDF-VSCSNDAS 141
+++G DKTIK+ G L TL GH + VRG+ V + VSC++D +
Sbjct: 302 KKSGKPGPFLLSGSRDKTIKMWDVSIGMCLMTLVGHDNWVRGVLVHPGGKYIVSCADDKT 361
Query: 142 IRVWDSTTGKCVHTMYGHPNFIYSVAAH--GDLITSGGEDQCVCVYQNK 188
+R+WD +C T+ H +F+ S+ H + +G DQ V V++ +
Sbjct: 362 LRIWDYKNKRCTKTLSAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 77/142 (54%), Gaps = 12/142 (8%)
Query: 92 IIVTGCADKTIKLHSEE-GEFLKTLTGHTDCVRGLAVLNDTDFV-SCSNDASIRVWDSTT 149
+IV+ D TIK+ E G+F +TL GHTD V+ ++ + + SCS D +I++WD
Sbjct: 122 VIVSASEDATIKVWDHETGDFERTLKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQG 181
Query: 150 GKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQNSFMIPAMS---VWAVA 204
+C+ TM+GH + + SVA +GD I S D+ + +++ + + + W
Sbjct: 182 FECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE--VATGYCVKTFTGHREWVRM 239
Query: 205 ILPNSD---IVTGSSDGIVRVF 223
+ PN D I + S+D VRV+
Sbjct: 240 VRPNQDGTLIASSSNDQTVRVW 261
Score = 67.0 bits (162), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 90/198 (45%), Gaps = 25/198 (12%)
Query: 7 ALYGHSMDVRSLSVTPD-GCILSASRDKSAKLW--KPNDLSPGAKVNT------------ 51
AL GH V + P I+SAS D + K+W + D K +T
Sbjct: 103 ALSGHRSPVTRVIFHPVFSVIVSASEDATIKVWDHETGDFERTLKGHTDSVQDISFDHTG 162
Query: 52 --LLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGI-IVTGCADKTIKL-HSE 107
L S S DMT KLW + +C T+ H+ V V + NG IV+ DKTIK+
Sbjct: 163 KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVA 222
Query: 108 EGEFLKTLTGHTDCVRGLAVLND-TDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSV 166
G +KT TGH + VR + D T S SND ++RVW T +C + H + + +
Sbjct: 223 TGYCVKTFTGHREWVRMVRPNQDGTLIASSSNDQTVRVWVVATKECKAELREHEHVVECI 282
Query: 167 -----AAHGDLITSGGED 179
+AH ++ + G +
Sbjct: 283 SWAPESAHPTILEATGSE 300
>sp|Q10281|GBLP_SCHPO Guanine nucleotide-binding protein subunit beta-like protein
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=rkp1 PE=1 SV=3
Length = 314
Score = 91.7 bits (226), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 88/293 (30%), Positives = 135/293 (46%), Gaps = 37/293 (12%)
Query: 4 LSTALYGHSMDVRSLSVTPDG--CILSASRDKSAKLWK--PNDLSPGAKVNTL------- 52
L L GHS V SLS P+ +LS SRDKS LW +D++ G L
Sbjct: 7 LRATLEGHSGWVTSLSTAPENPDILLSGSRDKSIILWNLVRDDVNYGVAQRRLTGHSHFV 66
Query: 53 ------------LSASWDMTAKLWCLESQQCKLTIRQHEMAVWGV-IQLANGIIVTGCAD 99
LSASWD T +LW LE +C H V V I N +V+G D
Sbjct: 67 SDCALSFDSHYALSASWDKTIRLWDLEKGECTHQFVGHTSDVLSVSISPDNRQVVSGSRD 126
Query: 100 KTIKLHSEEGEFLKTLT--GHTD---CVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVH 154
KTIK+ + G T+T GH+D CVR ++ FVS D +++VWD T
Sbjct: 127 KTIKIWNIIGNCKYTITDGGHSDWVSCVRFSPNPDNLTFVSAGWDKAVKVWDLETFSLRT 186
Query: 155 TMYGHPNFI--YSVAAHGDLITSGGEDQCVCVYQ-NKAQNSFMIPA-MSVWAVAILPNSD 210
+ YGH ++ +++ G L SGG D + ++ N++ + + + A ++ A+ PN
Sbjct: 187 SHYGHTGYVSAVTISPDGSLCASGGRDGTLMLWDLNESTHLYSLEAKANINALVFSPNRY 246
Query: 211 IVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDG 263
+ ++ +R+F D + ++ V + V K ++E E + S DG
Sbjct: 247 WLCAATGSSIRIF----DLETQEKVDELTVDFVGVGKKSSEPECISLTWSPDG 295
Score = 33.9 bits (76), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 7/59 (11%)
Query: 2 YKLSTALYGHSMDVRSLSVTPDGCIL-SASRDKSAKLWKPND------LSPGAKVNTLL 53
+ L T+ YGH+ V +++++PDG + S RD + LW N+ L A +N L+
Sbjct: 182 FSLRTSHYGHTGYVSAVTISPDGSLCASGGRDGTLMLWDLNESTHLYSLEAKANINALV 240
>sp|Q4P9P9|LIS1_USTMA Nuclear distribution protein PAC1 OS=Ustilago maydis (strain 521 /
FGSC 9021) GN=PAC1 PE=3 SV=1
Length = 453
Score = 91.7 bits (226), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 98/211 (46%), Gaps = 45/211 (21%)
Query: 2 YKLSTALYGHSMDVRSLSVTP-DGCILSASRDKSAKLWK----------------PNDLS 44
YK L GH V S+ P D I+SASRDK+ K+W+
Sbjct: 197 YKNIKTLQGHDHSVSSVRFLPGDDYIVSASRDKTIKIWEFSTGFCTKTLQGHAEWVRSAI 256
Query: 45 PGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHE----------MAVWGVIQ------- 87
P L+S S D TA++W + S + K+ +R HE +A + I+
Sbjct: 257 PSDDAKWLVSCSTDQTARVWDVSSGETKVELRGHEHVVEVAIFAPVASYAAIRQLASLDP 316
Query: 88 ---------LANGIIVTGCADKTIKL-HSEEGEFLKTLTGHTDCVRGLAVL-NDTDFVSC 136
+A + TG DKTI++ S G+ LKTLTGH + VRGLA N +S
Sbjct: 317 NASKDASASMAGQFVATGSRDKTIRIWDSISGQCLKTLTGHDNWVRGLAFSPNGKSLLSV 376
Query: 137 SNDASIRVWDSTTGKCVHTMYGHPNFIYSVA 167
S+D ++R+WD +G+C T+ H +F +A
Sbjct: 377 SDDKTMRLWDLQSGRCTRTIEAHQHFATGIA 407
Score = 66.2 bits (160), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 106/237 (44%), Gaps = 32/237 (13%)
Query: 8 LYGHSMDVRSLSVTPD-GCILSASRDKSAKLW----------------KPNDLSPGAKVN 50
+ GH + V +S P I SAS D + KLW D+ +K N
Sbjct: 118 MQGHRLPVTKVSFHPVFSQIASASEDTTVKLWDWETGDFERTLKGHTKAVQDVDFDSKGN 177
Query: 51 TLLSASWDMTAKLWCLESQQCKL-TIRQHEMAVWGVIQL-ANGIIVTGCADKTIKLHSEE 108
+LS S D++ K+W + + T++ H+ +V V L + IV+ DKTIK+
Sbjct: 178 YVLSCSSDLSIKVWDANNDYKNIKTLQGHDHSVSSVRFLPGDDYIVSASRDKTIKIWEFS 237
Query: 109 GEF-LKTLTGHTDCVRGLAVLNDTDF-VSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSV 166
F KTL GH + VR +D + VSCS D + RVWD ++G+ + GH + + V
Sbjct: 238 TGFCTKTLQGHAEWVRSAIPSDDAKWLVSCSTDQTARVWDVSSGETKVELRGHEHVV-EV 296
Query: 167 AAHGDLITSGGEDQCVCVYQNKAQNSFMIPAMSVWAVAILPNSDIVTGSSDGIVRVF 223
A + + Q + N +++ A A + + TGS D +R++
Sbjct: 297 AIFAPVASYAAIRQLASLDPNASKD----------ASASMAGQFVATGSRDKTIRIW 343
>sp|Q969H0|FBXW7_HUMAN F-box/WD repeat-containing protein 7 OS=Homo sapiens GN=FBXW7 PE=1
SV=1
Length = 707
Score = 90.5 bits (223), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 93/177 (52%), Gaps = 5/177 (2%)
Query: 50 NTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKL-HSEE 108
N ++S S D T K+W + +C T+ H VW Q+ + II++G D+T+K+ ++E
Sbjct: 392 NRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSS-QMRDNIIISGSTDRTLKVWNAET 450
Query: 109 GEFLKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAA 168
GE + TL GHT VR + L++ VS S DA++RVWD TG+C+H + GH + V
Sbjct: 451 GECIHTLYGHTSTVRCMH-LHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY 509
Query: 169 HGDLITSGGEDQCVCVYQNKAQNSFMIPAMSVWAVAILPNSDI--VTGSSDGIVRVF 223
G + SG D V V+ + + V L I V+GS D +RV+
Sbjct: 510 DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVW 566
Score = 83.6 bits (205), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 110/244 (45%), Gaps = 29/244 (11%)
Query: 3 KLSTALYGHSMDVRSLSVTPDGCILSASRDKSAKLWKPNDLSPGAKVNTL---------- 52
K L GH+ V S S D I+S S D++ K+W + G ++TL
Sbjct: 412 KCLRTLVGHTGGVWS-SQMRDNIIISGSTDRTLKVW---NAETGECIHTLYGHTSTVRCM 467
Query: 53 -------LSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLH 105
+S S D T ++W +E+ QC + H AV +Q +V+G D +K+
Sbjct: 468 HLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAV-RCVQYDGRRVVSGAYDFMVKVW 526
Query: 106 SEEGE-FLKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIY 164
E E L TL GHT+ V L + VS S D SIRVWD TG C+HT+ GH +
Sbjct: 527 DPETETCLHTLQGHTNRVYSLQ-FDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTS 585
Query: 165 SVAAHGDLITSGGEDQCVCVYQNKAQNSFMI---PAMSVWAVAILP--NSDIVTGSSDGI 219
+ +++ SG D V ++ K P AV L + ++T S DG
Sbjct: 586 GMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGT 645
Query: 220 VRVF 223
V+++
Sbjct: 646 VKLW 649
Score = 73.2 bits (178), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 80/152 (52%), Gaps = 4/152 (2%)
Query: 75 IRQHEMAVWGVIQLANGIIVTGCADKTIKLHSE-EGEFLKTLTGHTDCVRGLAVLNDTDF 133
++ H+ V +Q IV+G D T+K+ S G+ L+TL GHT V + + D
Sbjct: 376 LKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWS-SQMRDNII 434
Query: 134 VSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAAHGDLITSGGEDQCVCVYQNKAQNSF 193
+S S D +++VW++ TG+C+HT+YGH + + + H + SG D + V+ +
Sbjct: 435 ISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCL 494
Query: 194 MIPAMSVWAVAILP--NSDIVTGSSDGIVRVF 223
+ V AV + +V+G+ D +V+V+
Sbjct: 495 HVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVW 526
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 53/113 (46%), Gaps = 2/113 (1%)
Query: 113 KTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAAHGDL 172
K L GH D V VS S+D +++VW + TGKC+ T+ GH ++S ++
Sbjct: 374 KVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNI 433
Query: 173 ITSGGEDQCVCVYQNKAQNSF--MIPAMSVWAVAILPNSDIVTGSSDGIVRVF 223
I SG D+ + V+ + + S L +V+GS D +RV+
Sbjct: 434 IISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVW 486
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 82/169 (48%), Gaps = 23/169 (13%)
Query: 7 ALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPNDLSP-------GAKVNTL------ 52
L GH VR V DG ++S + D K+W P + +V +L
Sbjct: 496 VLMGHVAAVRC--VQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIH 553
Query: 53 -LSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHS-EEGE 110
+S S D + ++W +E+ C T+ H+ G ++L + I+V+G AD T+K+ + G+
Sbjct: 554 VVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSG-MELKDNILVSGNADSTVKIWDIKTGQ 612
Query: 111 FLKTLTG---HTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTM 156
L+TL G H V L N ++ S+D ++++WD TG+ + +
Sbjct: 613 CLQTLQGPNKHQSAVTCLQ-FNKNFVITSSDDGTVKLWDLKTGEFIRNL 660
>sp|Q8VBV4|FBXW7_MOUSE F-box/WD repeat-containing protein 7 OS=Mus musculus GN=Fbxw7 PE=1
SV=1
Length = 629
Score = 88.6 bits (218), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 93/177 (52%), Gaps = 5/177 (2%)
Query: 50 NTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKL-HSEE 108
N ++S S D T K+W + +C T+ H VW Q+ + II++G D+T+K+ ++E
Sbjct: 314 NRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSS-QMRDNIIISGSTDRTLKVWNAET 372
Query: 109 GEFLKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAA 168
GE + TL GHT VR + L++ VS S DA++RVWD TG+C+H + GH + V
Sbjct: 373 GECIHTLYGHTSTVRCMH-LHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY 431
Query: 169 HGDLITSGGEDQCVCVYQNKAQNSFMIPAMSVWAVAILPNSDI--VTGSSDGIVRVF 223
G + SG D V V+ + + V L I V+GS D +RV+
Sbjct: 432 DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVW 488
Score = 82.4 bits (202), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 111/244 (45%), Gaps = 29/244 (11%)
Query: 3 KLSTALYGHSMDVRSLSVTPDGCILSASRDKSAKLWKPNDLSPGAKVNTL---------- 52
K L GH+ V S S D I+S S D++ K+W + G ++TL
Sbjct: 334 KCLRTLVGHTGGVWS-SQMRDNIIISGSTDRTLKVW---NAETGECIHTLYGHTSTVRCM 389
Query: 53 -------LSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLH 105
+S S D T ++W +E+ QC + H AV +Q +V+G D +K+
Sbjct: 390 HLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAV-RCVQYDGRRVVSGAYDFMVKVW 448
Query: 106 SEEGE-FLKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIY 164
E E L TL GHT+ V L + VS S D SIRVWD TG C+HT+ GH +
Sbjct: 449 DPETETCLHTLQGHTNRVYSLQ-FDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTS 507
Query: 165 SVAAHGDLITSGGEDQCVCVYQNKAQNSFMI---PAMSVWAVAILP--NSDIVTGSSDGI 219
+ +++ SG D V ++ K P+ AV L + ++T S DG
Sbjct: 508 GMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNKNFVITSSDDGT 567
Query: 220 VRVF 223
V+++
Sbjct: 568 VKLW 571
Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 80/152 (52%), Gaps = 4/152 (2%)
Query: 75 IRQHEMAVWGVIQLANGIIVTGCADKTIKLHSE-EGEFLKTLTGHTDCVRGLAVLNDTDF 133
++ H+ V +Q IV+G D T+K+ S G+ L+TL GHT V + + D
Sbjct: 298 LKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWS-SQMRDNII 356
Query: 134 VSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAAHGDLITSGGEDQCVCVYQNKAQNSF 193
+S S D +++VW++ TG+C+HT+YGH + + + H + SG D + V+ +
Sbjct: 357 ISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCL 416
Query: 194 MIPAMSVWAVAILP--NSDIVTGSSDGIVRVF 223
+ V AV + +V+G+ D +V+V+
Sbjct: 417 HVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVW 448
Score = 53.9 bits (128), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 53/113 (46%), Gaps = 2/113 (1%)
Query: 113 KTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAAHGDL 172
K L GH D V VS S+D +++VW + TGKC+ T+ GH ++S ++
Sbjct: 296 KVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNI 355
Query: 173 ITSGGEDQCVCVYQNKAQNSF--MIPAMSVWAVAILPNSDIVTGSSDGIVRVF 223
I SG D+ + V+ + + S L +V+GS D +RV+
Sbjct: 356 IISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVW 408
Score = 49.3 bits (116), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 82/169 (48%), Gaps = 23/169 (13%)
Query: 7 ALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPNDLSP-------GAKVNTL------ 52
L GH VR V DG ++S + D K+W P + +V +L
Sbjct: 418 VLMGHVAAVRC--VQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIH 475
Query: 53 -LSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHS-EEGE 110
+S S D + ++W +E+ C T+ H+ G ++L + I+V+G AD T+K+ + G+
Sbjct: 476 VVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSG-MELKDNILVSGNADSTVKIWDIKTGQ 534
Query: 111 FLKTLTG---HTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTM 156
L+TL G H V L N ++ S+D ++++WD TG+ + +
Sbjct: 535 CLQTLQGPSKHQSAVTCLQ-FNKNFVITSSDDGTVKLWDLKTGEFIRNL 582
>sp|B4LQ21|LIS1_DROVI Lissencephaly-1 homolog OS=Drosophila virilis GN=Lis-1 PE=3 SV=1
Length = 411
Score = 87.8 bits (216), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 105/232 (45%), Gaps = 48/232 (20%)
Query: 2 YKLSTALYGHSMDVRSLSVTPDG-CILSASRDKSAKLWKPNDLSPGAKVNT--------- 51
Y+ ++GH +V S++ P G +LSASRD++ K+W +++ G V T
Sbjct: 183 YECVKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMW---EVATGYCVKTYTGHREWVR 239
Query: 52 ----------LLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG---------- 91
+ S D T ++W S+ CK+ +R HE V +
Sbjct: 240 MVRVHIEGSIFATCSNDHTIRVWLTNSKDCKVELRDHEHTVECIAWAPEAAASAINEAAG 299
Query: 92 -----------IIVTGCADKTIKLHSEE-GEFLKTLTGHTDCVRGLAVLNDTDF-VSCSN 138
+ +G DKTI++ G+ L TL GH + VRGLA + VS S+
Sbjct: 300 ADNKKGHHQGPFLASGSRDKTIRIWDVSVGQCLLTLNGHDNWVRGLAFHPGGKYLVSASD 359
Query: 139 DASIRVWDSTTGKCVHTMYGHPNFIYSVAAHGD--LITSGGEDQCVCVYQNK 188
D +IRVWD +C+ T+Y H +F S+ H + SG DQ V V++ +
Sbjct: 360 DKTIRVWDLRNKRCMKTLYAHQHFCTSIDFHKAHPYVISGSVDQTVKVWECR 411
Score = 65.9 bits (159), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 77/146 (52%), Gaps = 6/146 (4%)
Query: 52 LLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGC-ADKTIKL--HSEE 108
++SAS D T K+W E+ + + +++ H +V V A G ++ C AD +IKL +
Sbjct: 123 MVSASEDATIKIWDFETGEYERSLKGHTDSVQDVAFDAQGKLLASCSADLSIKLWDFQQS 182
Query: 109 GEFLKTLTGHTDCVRGLAVLNDTDFV-SCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVA 167
E +KT+ GH V +A + D+V S S D +I++W+ TG CV T GH ++ V
Sbjct: 183 YECVKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEVATGYCVKTYTGHREWVRMVR 242
Query: 168 AH--GDLITSGGEDQCVCVYQNKAQN 191
H G + + D + V+ +++
Sbjct: 243 VHIEGSIFATCSNDHTIRVWLTNSKD 268
Score = 63.5 bits (153), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 113/270 (41%), Gaps = 47/270 (17%)
Query: 7 ALYGHSMDVRSLSVTPD-GCILSASRDKSAKLW----------------KPNDLSPGAKV 49
+L GH + + P G ++SAS D + K+W D++ A+
Sbjct: 103 SLTGHRASITRVIFHPIFGLMVSASEDATIKIWDFETGEYERSLKGHTDSVQDVAFDAQG 162
Query: 50 NTLLSASWDMTAKLWCL-ESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKL-HS 106
L S S D++ KLW +S +C T+ H+ V V + G +++ D+TIK+
Sbjct: 163 KLLASCSADLSIKLWDFQQSYECVKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEV 222
Query: 107 EEGEFLKTLTGHTDCVRGLAV-LNDTDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYS 165
G +KT TGH + VR + V + + F +CSND +IRVW + + C + H + +
Sbjct: 223 ATGYCVKTYTGHREWVRMVRVHIEGSIFATCSNDHTIRVWLTNSKDCKVELRDHEHTVEC 282
Query: 166 VAA----------------------HGDLITSGGEDQCVCVYQ-NKAQNSFMIPAMSVW- 201
+A G + SG D+ + ++ + Q + W
Sbjct: 283 IAWAPEAAASAINEAAGADNKKGHHQGPFLASGSRDKTIRIWDVSVGQCLLTLNGHDNWV 342
Query: 202 -AVAILPNSD-IVTGSSDGIVRVFSANPDR 229
+A P +V+ S D +RV+ R
Sbjct: 343 RGLAFHPGGKYLVSASDDKTIRVWDLRNKR 372
>sp|B4JWA1|LIS1_DROGR Lissencephaly-1 homolog OS=Drosophila grimshawi GN=Lis-1 PE=3 SV=1
Length = 411
Score = 87.8 bits (216), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 105/232 (45%), Gaps = 48/232 (20%)
Query: 2 YKLSTALYGHSMDVRSLSVTPDG-CILSASRDKSAKLWKPNDLSPGAKVNT--------- 51
Y+ ++GH +V S++ P G +LSASRD++ K+W +++ G V T
Sbjct: 183 YECVKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMW---EVATGYCVKTYTGHREWVR 239
Query: 52 ----------LLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG---------- 91
+ S D T ++W S+ CK+ +R HE V +
Sbjct: 240 MVRVHIEGSIFATCSNDHTIRVWLTNSKDCKVELRDHEHTVECIAWAPEAAASAINEAAG 299
Query: 92 -----------IIVTGCADKTIKLHSEE-GEFLKTLTGHTDCVRGLAVLNDTDF-VSCSN 138
+ +G DKTI++ G+ L TL GH + VRGLA + VS S+
Sbjct: 300 ADNKKGHHQGPFLASGSRDKTIRIWDVSVGQCLLTLNGHDNWVRGLAFHPGGKYLVSASD 359
Query: 139 DASIRVWDSTTGKCVHTMYGHPNFIYSVAAHGD--LITSGGEDQCVCVYQNK 188
D +IRVWD +C+ T+Y H +F S+ H + SG DQ V V++ +
Sbjct: 360 DKTIRVWDLRNKRCMKTLYAHQHFCTSIDFHKAHPYVISGSVDQTVKVWECR 411
Score = 67.0 bits (162), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 77/146 (52%), Gaps = 6/146 (4%)
Query: 52 LLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGC-ADKTIKL--HSEE 108
++SAS D T K+W E+ + + T++ H +V V A G ++ C AD +IKL +
Sbjct: 123 MVSASEDATIKIWDFETGEYERTLKGHTDSVQDVAFDAQGKLLVSCSADLSIKLWDFQQS 182
Query: 109 GEFLKTLTGHTDCVRGLAVLNDTDFV-SCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVA 167
E +KT+ GH V +A + D+V S S D +I++W+ TG CV T GH ++ V
Sbjct: 183 YECVKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEVATGYCVKTYTGHREWVRMVR 242
Query: 168 AH--GDLITSGGEDQCVCVYQNKAQN 191
H G + + D + V+ +++
Sbjct: 243 VHIEGSIFATCSNDHTIRVWLTNSKD 268
Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 114/270 (42%), Gaps = 47/270 (17%)
Query: 7 ALYGHSMDVRSLSVTPD-GCILSASRDKSAKLW----------------KPNDLSPGAKV 49
+L GH + + P G ++SAS D + K+W D++ A+
Sbjct: 103 SLTGHRASITRVIFHPIFGLMVSASEDATIKIWDFETGEYERTLKGHTDSVQDVAFDAQG 162
Query: 50 NTLLSASWDMTAKLWCL-ESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKL-HS 106
L+S S D++ KLW +S +C T+ H+ V V + G +++ D+TIK+
Sbjct: 163 KLLVSCSADLSIKLWDFQQSYECVKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEV 222
Query: 107 EEGEFLKTLTGHTDCVRGLAV-LNDTDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYS 165
G +KT TGH + VR + V + + F +CSND +IRVW + + C + H + +
Sbjct: 223 ATGYCVKTYTGHREWVRMVRVHIEGSIFATCSNDHTIRVWLTNSKDCKVELRDHEHTVEC 282
Query: 166 VAA----------------------HGDLITSGGEDQCVCVYQ-NKAQNSFMIPAMSVW- 201
+A G + SG D+ + ++ + Q + W
Sbjct: 283 IAWAPEAAASAINEAAGADNKKGHHQGPFLASGSRDKTIRIWDVSVGQCLLTLNGHDNWV 342
Query: 202 -AVAILPNSD-IVTGSSDGIVRVFSANPDR 229
+A P +V+ S D +RV+ R
Sbjct: 343 RGLAFHPGGKYLVSASDDKTIRVWDLRNKR 372
>sp|Q8YTC2|Y2800_NOSS1 Uncharacterized WD repeat-containing protein alr2800 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=alr2800 PE=4 SV=1
Length = 1258
Score = 87.4 bits (215), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 114/230 (49%), Gaps = 34/230 (14%)
Query: 3 KLSTALYGHSMDVRSLSVTPDGCILSASRDKSAKLWKPNDLSPGAKVNTLLSASWDMTAK 62
KL GHS VR + +PDG IL+ S GA D K
Sbjct: 675 KLLLICRGHSNWVRFVVFSPDGEILA---------------SCGA----------DENVK 709
Query: 63 LWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHS-EEGEFLKTLTGHTD 120
LW + C T+ HE V+ V +G + + DKTIKL ++G L+TLTGHTD
Sbjct: 710 LWSVRDGVCIKTLTGHEHEVFSVAFHPDGETLASASGDKTIKLWDIQDGTCLQTLTGHTD 769
Query: 121 CVRGLAVLNDTD-FVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVA--AHGDLITSGG 177
VR +A D + S + D +I++WD + GKC+ T+ H ++ SVA A G + SG
Sbjct: 770 WVRCVAFSPDGNTLASSAADHTIKLWDVSQGKCLRTLKSHTGWVRSVAFSADGQTLASGS 829
Query: 178 EDQCVCVYQ---NKAQNSFMIPAMSVWAVAILPNSDI-VTGSSDGIVRVF 223
D+ + ++ + +++ SV+++A P+S I V+GS D ++++
Sbjct: 830 GDRTIKIWNYHTGECLKTYIGHTNSVYSIAYSPDSKILVSGSGDRTIKLW 879
Score = 84.0 bits (206), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 122/251 (48%), Gaps = 32/251 (12%)
Query: 3 KLSTALYGHSMDVRSLSVTPDGCIL-SASRDKSAKLWKPNDLSPGAKVNTLL-------- 53
K ++L GH+ + ++ +PD L SAS D S +LW ++S G LL
Sbjct: 969 KYISSLEGHTDFIYGIAFSPDSQTLASASTDSSVRLW---NISTGQCFQILLEHTDWVYA 1025
Query: 54 -----------SASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKT 101
+ S D T KLW + + QC T+ +H + G+ +G ++ + AD++
Sbjct: 1026 VVFHPQGKIIATGSADCTVKLWNISTGQCLKTLSEHSDKILGMAWSPDGQLLASASADQS 1085
Query: 102 IKL-HSEEGEFLKTLTGHTDCV-RGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMYGH 159
++L G + L GH++ V + N +CS D ++++WD GKC+ T+ GH
Sbjct: 1086 VRLWDCCTGRCVGILRGHSNRVYSAIFSPNGEIIATCSTDQTVKIWDWQQGKCLKTLTGH 1145
Query: 160 PNFIYSVA--AHGDLITSGGEDQCVCVYQ---NKAQNSFMIPAMSVWAVAILPNSDIV-T 213
N+++ +A G ++ S DQ V ++ K + + V +VA P+ ++V +
Sbjct: 1146 TNWVFDIAFSPDGKILASASHDQTVRIWDVNTGKCHHICIGHTHLVSSVAFSPDGEVVAS 1205
Query: 214 GSSDGIVRVFS 224
GS D VR+++
Sbjct: 1206 GSQDQTVRIWN 1216
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 117/250 (46%), Gaps = 30/250 (12%)
Query: 3 KLSTALYGHSMDVRSLSVTPDGCIL-SASRDKSAKLWKPND------------------L 43
K L H+ VRS++ + DG L S S D++ K+W +
Sbjct: 801 KCLRTLKSHTGWVRSVAFSADGQTLASGSGDRTIKIWNYHTGECLKTYIGHTNSVYSIAY 860
Query: 44 SPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCA-DKTI 102
SP +K+ L+S S D T KLW ++ C T+ H V V +G + + D+++
Sbjct: 861 SPDSKI--LVSGSGDRTIKLWDCQTHICIKTLHGHTNEVCSVAFSPDGQTLACVSLDQSV 918
Query: 103 KL-HSEEGEFLKTLTGHTDCVRGLAVLNDTDFV-SCSNDASIRVWDSTTGKCVHTMYGHP 160
+L + G+ LK G+TD +A D + S SND ++++WD TGK + ++ GH
Sbjct: 919 RLWNCRTGQCLKAWYGNTDWALPVAFSPDRQILASGSNDKTVKLWDWQTGKYISSLEGHT 978
Query: 161 NFIYSVAAHGD--LITSGGEDQCVCVYQNKAQNSFMIPAMS---VWAVAILPNSDIV-TG 214
+FIY +A D + S D V ++ F I V+AV P I+ TG
Sbjct: 979 DFIYGIAFSPDSQTLASASTDSSVRLWNISTGQCFQILLEHTDWVYAVVFHPQGKIIATG 1038
Query: 215 SSDGIVRVFS 224
S+D V++++
Sbjct: 1039 SADCTVKLWN 1048
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 77/169 (45%), Gaps = 26/169 (15%)
Query: 11 HSMDVRSLSVTPDGCIL-SASRDKSAKLWKPNDLSPGAKVNTL----------------- 52
HS + ++ +PDG +L SAS D+S +LW D G V L
Sbjct: 1061 HSDKILGMAWSPDGQLLASASADQSVRLW---DCCTGRCVGILRGHSNRVYSAIFSPNGE 1117
Query: 53 --LSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHS-EE 108
+ S D T K+W + +C T+ H V+ + +G I+ + D+T+++
Sbjct: 1118 IIATCSTDQTVKIWDWQQGKCLKTLTGHTNWVFDIAFSPDGKILASASHDQTVRIWDVNT 1177
Query: 109 GEFLKTLTGHTDCVRGLAVLNDTDFV-SCSNDASIRVWDSTTGKCVHTM 156
G+ GHT V +A D + V S S D ++R+W+ TG+C+ +
Sbjct: 1178 GKCHHICIGHTHLVSSVAFSPDGEVVASGSQDQTVRIWNVKTGECLQIL 1226
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 45/82 (54%), Gaps = 3/82 (3%)
Query: 107 EEGEFLKTLTGHTDCVRGLAVLNDTDFV-SCSNDASIRVWDSTTGKCVHTMYGHPNFIYS 165
+ G+ L GH++ VR + D + + SC D ++++W G C+ T+ GH + ++S
Sbjct: 672 KSGKLLLICRGHSNWVRFVVFSPDGEILASCGADENVKLWSVRDGVCIKTLTGHEHEVFS 731
Query: 166 VAAH--GDLITSGGEDQCVCVY 185
VA H G+ + S D+ + ++
Sbjct: 732 VAFHPDGETLASASGDKTIKLW 753
Score = 37.0 bits (84), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 51/99 (51%), Gaps = 10/99 (10%)
Query: 133 FVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSV--AAHGDLITSGGEDQCVCVYQNKAQ 190
+C D +RVW+ +GK + GH N++ V + G+++ S G D+ V ++ +
Sbjct: 657 LATCDTDCHVRVWEVKSGKLLLICRGHSNWVRFVVFSPDGEILASCGADENVKLW--SVR 714
Query: 191 NSFMIPAMS-----VWAVAILPNSD-IVTGSSDGIVRVF 223
+ I ++ V++VA P+ + + + S D ++++
Sbjct: 715 DGVCIKTLTGHEHEVFSVAFHPDGETLASASGDKTIKLW 753
Score = 36.6 bits (83), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 50/116 (43%), Gaps = 25/116 (21%)
Query: 3 KLSTALYGHSMDVRSLSVTPDGCIL-SASRDKSAKLWKPND------------------L 43
K L GH+ V ++ +PDG IL SAS D++ ++W N
Sbjct: 1137 KCLKTLTGHTNWVFDIAFSPDGKILASASHDQTVRIWDVNTGKCHHICIGHTHLVSSVAF 1196
Query: 44 SPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHE----MAVWGVIQLANGIIVT 95
SP +V + S S D T ++W +++ +C +R M + GV L I T
Sbjct: 1197 SPDGEV--VASGSQDQTVRIWNVKTGECLQILRAKRLYEGMNITGVTGLTKATIFT 1250
>sp|Q291L9|LIS1_DROPS Lissencephaly-1 homolog OS=Drosophila pseudoobscura pseudoobscura
GN=Lis-1 PE=3 SV=1
Length = 411
Score = 87.4 bits (215), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 105/232 (45%), Gaps = 48/232 (20%)
Query: 2 YKLSTALYGHSMDVRSLSVTPDG-CILSASRDKSAKLWKPNDLSPGAKVNT--------- 51
Y+ ++GH +V S++ P G +LSASRD++ K+W +++ G V T
Sbjct: 183 YECVKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMW---EVATGYCVKTYTGHREWVR 239
Query: 52 ----------LLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG---------- 91
+ S D T ++W + S+ CK+ +R HE V +
Sbjct: 240 MVRVHIEGSIFATCSNDHTIRVWLMNSKDCKVELRDHEHTVECIAWAPEAAASAINEAAG 299
Query: 92 -----------IIVTGCADKTIKLHSEE-GEFLKTLTGHTDCVRGLAVLNDTDF-VSCSN 138
+ +G DKTI++ G L TL GH + VRGLA + VS S+
Sbjct: 300 ADNKKGHHQGPFLASGSRDKTIRIWDVSVGLCLLTLNGHDNWVRGLAFHPGGKYLVSASD 359
Query: 139 DASIRVWDSTTGKCVHTMYGHPNFIYSVAAHGD--LITSGGEDQCVCVYQNK 188
D +IRVWD +C+ T+Y H +F S+ H + SG DQ V V++ +
Sbjct: 360 DKTIRVWDLRNKRCMKTLYAHQHFCTSIDFHKAHPYVISGSVDQTVKVWECR 411
Score = 63.9 bits (154), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 74/140 (52%), Gaps = 6/140 (4%)
Query: 52 LLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGC-ADKTIKL--HSEE 108
++SAS D T K+W E+ + + +++ H +V V + G ++ C AD +IKL +
Sbjct: 123 MVSASEDATIKIWDFETGEYERSLKGHTDSVQDVAFDSQGKLLASCSADLSIKLWDFQQS 182
Query: 109 GEFLKTLTGHTDCVRGLAVLNDTDFV-SCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVA 167
E +KT+ GH V +A + D+V S S D +I++W+ TG CV T GH ++ V
Sbjct: 183 YECVKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEVATGYCVKTYTGHREWVRMVR 242
Query: 168 AH--GDLITSGGEDQCVCVY 185
H G + + D + V+
Sbjct: 243 VHIEGSIFATCSNDHTIRVW 262
Score = 60.1 bits (144), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 85/181 (46%), Gaps = 21/181 (11%)
Query: 7 ALYGHSMDVRSLSVTPD-GCILSASRDKSAKLW----------------KPNDLSPGAKV 49
+L GH + + P G ++SAS D + K+W D++ ++
Sbjct: 103 SLTGHRASITRVIFHPIFGLMVSASEDATIKIWDFETGEYERSLKGHTDSVQDVAFDSQG 162
Query: 50 NTLLSASWDMTAKLWCL-ESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKL-HS 106
L S S D++ KLW +S +C T+ H+ V V + G +++ D+TIK+
Sbjct: 163 KLLASCSADLSIKLWDFQQSYECVKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEV 222
Query: 107 EEGEFLKTLTGHTDCVRGLAV-LNDTDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYS 165
G +KT TGH + VR + V + + F +CSND +IRVW + C + H + +
Sbjct: 223 ATGYCVKTYTGHREWVRMVRVHIEGSIFATCSNDHTIRVWLMNSKDCKVELRDHEHTVEC 282
Query: 166 V 166
+
Sbjct: 283 I 283
Score = 38.1 bits (87), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 53/99 (53%), Gaps = 9/99 (9%)
Query: 133 FVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVA--AHGDLITSGGEDQCVCVYQNKAQ 190
VS S DA+I++WD TG+ ++ GH + + VA + G L+ S D + ++ + Q
Sbjct: 123 MVSASEDATIKIWDFETGEYERSLKGHTDSVQDVAFDSQGKLLASCSADLSIKLWDFQ-Q 181
Query: 191 NSFMIPAM-----SVWAVAILPNSD-IVTGSSDGIVRVF 223
+ + M +V +VA +P D +++ S D ++++
Sbjct: 182 SYECVKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMW 220
>sp|B4GAJ1|LIS1_DROPE Lissencephaly-1 homolog OS=Drosophila persimilis GN=Lis-1 PE=3 SV=1
Length = 411
Score = 87.4 bits (215), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 105/232 (45%), Gaps = 48/232 (20%)
Query: 2 YKLSTALYGHSMDVRSLSVTPDG-CILSASRDKSAKLWKPNDLSPGAKVNT--------- 51
Y+ ++GH +V S++ P G +LSASRD++ K+W +++ G V T
Sbjct: 183 YECVKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMW---EVATGYCVKTYTGHREWVR 239
Query: 52 ----------LLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG---------- 91
+ S D T ++W + S+ CK+ +R HE V +
Sbjct: 240 MVRVHIEGSIFATCSNDHTIRVWLMNSKDCKVELRDHEHTVECIAWAPEAAASAINEAAG 299
Query: 92 -----------IIVTGCADKTIKLHSEE-GEFLKTLTGHTDCVRGLAVLNDTDF-VSCSN 138
+ +G DKTI++ G L TL GH + VRGLA + VS S+
Sbjct: 300 ADNKKGHHQGPFLASGSRDKTIRIWDVSVGLCLLTLNGHDNWVRGLAFHPGGKYLVSASD 359
Query: 139 DASIRVWDSTTGKCVHTMYGHPNFIYSVAAHGD--LITSGGEDQCVCVYQNK 188
D +IRVWD +C+ T+Y H +F S+ H + SG DQ V V++ +
Sbjct: 360 DKTIRVWDLRNKRCMKTLYAHQHFCTSIDFHKAHPYVISGSVDQTVKVWECR 411
Score = 63.9 bits (154), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 74/140 (52%), Gaps = 6/140 (4%)
Query: 52 LLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGC-ADKTIKL--HSEE 108
++SAS D T K+W E+ + + +++ H +V V + G ++ C AD +IKL +
Sbjct: 123 MVSASEDATIKIWDFETGEYERSLKGHTDSVQDVAFDSQGKLLASCSADLSIKLWDFQQS 182
Query: 109 GEFLKTLTGHTDCVRGLAVLNDTDFV-SCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVA 167
E +KT+ GH V +A + D+V S S D +I++W+ TG CV T GH ++ V
Sbjct: 183 YECVKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEVATGYCVKTYTGHREWVRMVR 242
Query: 168 AH--GDLITSGGEDQCVCVY 185
H G + + D + V+
Sbjct: 243 VHIEGSIFATCSNDHTIRVW 262
Score = 60.1 bits (144), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 85/181 (46%), Gaps = 21/181 (11%)
Query: 7 ALYGHSMDVRSLSVTPD-GCILSASRDKSAKLW----------------KPNDLSPGAKV 49
+L GH + + P G ++SAS D + K+W D++ ++
Sbjct: 103 SLTGHRASITRVIFHPIFGLMVSASEDATIKIWDFETGEYERSLKGHTDSVQDVAFDSQG 162
Query: 50 NTLLSASWDMTAKLWCL-ESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKL-HS 106
L S S D++ KLW +S +C T+ H+ V V + G +++ D+TIK+
Sbjct: 163 KLLASCSADLSIKLWDFQQSYECVKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEV 222
Query: 107 EEGEFLKTLTGHTDCVRGLAV-LNDTDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYS 165
G +KT TGH + VR + V + + F +CSND +IRVW + C + H + +
Sbjct: 223 ATGYCVKTYTGHREWVRMVRVHIEGSIFATCSNDHTIRVWLMNSKDCKVELRDHEHTVEC 282
Query: 166 V 166
+
Sbjct: 283 I 283
Score = 38.1 bits (87), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 53/99 (53%), Gaps = 9/99 (9%)
Query: 133 FVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVA--AHGDLITSGGEDQCVCVYQNKAQ 190
VS S DA+I++WD TG+ ++ GH + + VA + G L+ S D + ++ + Q
Sbjct: 123 MVSASEDATIKIWDFETGEYERSLKGHTDSVQDVAFDSQGKLLASCSADLSIKLWDFQ-Q 181
Query: 191 NSFMIPAM-----SVWAVAILPNSD-IVTGSSDGIVRVF 223
+ + M +V +VA +P D +++ S D ++++
Sbjct: 182 SYECVKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMW 220
>sp|Q9VZF4|FBXW7_DROME F-box/WD repeat-containing protein 7 OS=Drosophila melanogaster
GN=ago PE=1 SV=1
Length = 1326
Score = 87.0 bits (214), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/244 (32%), Positives = 114/244 (46%), Gaps = 29/244 (11%)
Query: 3 KLSTALYGHSMDVRSLSVTPDGCILSASRDKSAKLWKPNDLSPGAKVNTL---------- 52
K L GH+ V S ++ + I+S S D++ K+W D+ GA V+TL
Sbjct: 1026 KCLRTLVGHTGGVWSSQMSGN-IIISGSTDRTLKVW---DMDSGACVHTLQGHTSTVRCM 1081
Query: 53 -------LSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKL- 104
+S S D T ++W +E C + H AV +Q +IV+G D +K+
Sbjct: 1082 HLHGSKVVSGSRDATLRVWDIEQGSCLHVLVGHLAAVR-CVQYDGKLIVSGAYDYMVKIW 1140
Query: 105 HSEEGEFLKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIY 164
H E E L TL GHT+ V L + VS S D SIRVWD TG C HT+ GH +
Sbjct: 1141 HPERQECLHTLQGHTNRVYSLQ-FDGLHVVSGSLDTSIRVWDVETGNCKHTLMGHQSLTS 1199
Query: 165 SVAAHGDLITSGGEDQCVCVYQ---NKAQNSFMIPAMSVWAVAILP-NSD-IVTGSSDGI 219
+ +++ SG D V V+ + + P AV L NS +VT S DG
Sbjct: 1200 GMELRQNILVSGNADSTVKVWDITTGQCLQTLSGPNKHHSAVTCLQFNSRFVVTSSDDGT 1259
Query: 220 VRVF 223
V+++
Sbjct: 1260 VKLW 1263
Score = 85.1 bits (209), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 89/177 (50%), Gaps = 5/177 (2%)
Query: 50 NTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKL-HSEE 108
N ++S S D T K+W + +C T+ H VW Q++ II++G D+T+K+ +
Sbjct: 1006 NRIVSGSDDNTLKVWSAVNGKCLRTLVGHTGGVWSS-QMSGNIIISGSTDRTLKVWDMDS 1064
Query: 109 GEFLKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAA 168
G + TL GHT VR + L+ + VS S DA++RVWD G C+H + GH + V
Sbjct: 1065 GACVHTLQGHTSTVRCMH-LHGSKVVSGSRDATLRVWDIEQGSCLHVLVGHLAAVRCVQY 1123
Query: 169 HGDLITSGGEDQCVCVYQNKAQNSFMIPAMSVWAVAIL--PNSDIVTGSSDGIVRVF 223
G LI SG D V ++ + Q V L +V+GS D +RV+
Sbjct: 1124 DGKLIVSGAYDYMVKIWHPERQECLHTLQGHTNRVYSLQFDGLHVVSGSLDTSIRVW 1180
Score = 69.3 bits (168), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 85/159 (53%), Gaps = 6/159 (3%)
Query: 75 IRQHEMAVWGVIQLANGIIVTGCADKTIKLHSE-EGEFLKTLTGHTDCVRGLAVLNDTDF 133
++ H+ V +Q + IV+G D T+K+ S G+ L+TL GHT V + ++
Sbjct: 990 LKGHDDHVITCLQFSGNRIVSGSDDNTLKVWSAVNGKCLRTLVGHTGGVWS-SQMSGNII 1048
Query: 134 VSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAAHGDLITSGGEDQCVCVYQNKAQNSF 193
+S S D +++VWD +G CVHT+ GH + + + HG + SG D + V+ + +
Sbjct: 1049 ISGSTDRTLKVWDMDSGACVHTLQGHTSTVRCMHLHGSKVVSGSRDATLRVWDIEQGSCL 1108
Query: 194 MIPAMSVWAVAILPNSD--IVTGSSDGIVRVFSANPDRQ 230
+ + AV + IV+G+ D +V+++ +P+RQ
Sbjct: 1109 HVLVGHLAAVRCVQYDGKLIVSGAYDYMVKIW--HPERQ 1145
Score = 54.3 bits (129), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 56/113 (49%), Gaps = 2/113 (1%)
Query: 113 KTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAAHGDL 172
K L GH D V + VS S+D +++VW + GKC+ T+ GH ++S G++
Sbjct: 988 KVLKGHDDHVITCLQFSGNRIVSGSDDNTLKVWSAVNGKCLRTLVGHTGGVWSSQMSGNI 1047
Query: 173 ITSGGEDQCVCVY--QNKAQNSFMIPAMSVWAVAILPNSDIVTGSSDGIVRVF 223
I SG D+ + V+ + A + S L S +V+GS D +RV+
Sbjct: 1048 IISGSTDRTLKVWDMDSGACVHTLQGHTSTVRCMHLHGSKVVSGSRDATLRVW 1100
Score = 52.8 bits (125), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 80/168 (47%), Gaps = 23/168 (13%)
Query: 8 LYGHSMDVRSLSVTPDG-CILSASRDKSAKLWKPNDLSP-------GAKVNTL------- 52
L GH VR V DG I+S + D K+W P +V +L
Sbjct: 1111 LVGHLAAVRC--VQYDGKLIVSGAYDYMVKIWHPERQECLHTLQGHTNRVYSLQFDGLHV 1168
Query: 53 LSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKL-HSEEGEF 111
+S S D + ++W +E+ CK T+ H+ G ++L I+V+G AD T+K+ G+
Sbjct: 1169 VSGSLDTSIRVWDVETGNCKHTLMGHQSLTSG-MELRQNILVSGNADSTVKVWDITTGQC 1227
Query: 112 LKTLTG---HTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTM 156
L+TL+G H V L N V+ S+D ++++WD TG + +
Sbjct: 1228 LQTLSGPNKHHSAVTCLQ-FNSRFVVTSSDDGTVKLWDVKTGDFIRNL 1274
>sp|Q61FW2|SEL10_CAEBR F-box/WD repeat-containing protein sel-10 OS=Caenorhabditis
briggsae GN=sel-10 PE=3 SV=1
Length = 589
Score = 86.7 bits (213), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 95/180 (52%), Gaps = 7/180 (3%)
Query: 50 NTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVW-GVIQLANGIIVTGCADKTIKL-HSE 107
+ L++ S D T K+W ++ + K T+ H VW I IV+G D+T+K+ +E
Sbjct: 269 DLLVTGSDDNTLKVWSIDDGEVKHTLNGHSGGVWTSQISQCGRYIVSGSTDRTVKVWRAE 328
Query: 108 EGEFLKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVA 167
+G L TL GHT VR +A+ N T V+ S D ++RVWD TG V T+ GH + V
Sbjct: 329 DGFLLHTLQGHTSTVRCMAMANTT-LVTGSRDCTLRVWDIETGLHVRTLQGHQAAVRCVQ 387
Query: 168 AHGDLITSGGEDQCVCV---YQNKAQNSFMIPAMSVWAVAILPNSDIV-TGSSDGIVRVF 223
G+++ SGG D V + + K + + + V+++ IV +GS D +RV+
Sbjct: 388 FDGNIVVSGGYDFTVKIWDAFSGKCLRTLIGHSNRVYSLLYESERSIVCSGSLDTSIRVW 447
Score = 75.9 bits (185), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 96/202 (47%), Gaps = 28/202 (13%)
Query: 7 ALYGHSMDVRSLSVTPDGCILSASRDKSAKLWKPNDLSPGAKVNTL-------------- 52
L GH+ VR +++ + +++ SRD + ++W D+ G V TL
Sbjct: 335 TLQGHTSTVRCMAM-ANTTLVTGSRDCTLRVW---DIETGLHVRTLQGHQAAVRCVQFDG 390
Query: 53 ---LSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVI-QLANGIIVTGCADKTIKL---- 104
+S +D T K+W S +C T+ H V+ ++ + I+ +G D +I++
Sbjct: 391 NIVVSGGYDFTVKIWDAFSGKCLRTLIGHSNRVYSLLYESERSIVCSGSLDTSIRVWDFS 450
Query: 105 HSEEGEFLKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIY 164
E E + L+GHT G+ L VSC+ D+ +RVWD G C+H + GH + I
Sbjct: 451 RPEGQELIAFLSGHTSLTSGMQ-LRGNILVSCNADSHVRVWDIYEGTCIHILSGHRSAIT 509
Query: 165 SVAAHGD-LITSGGEDQCVCVY 185
S+ G L+ + +D V ++
Sbjct: 510 SLQWFGRGLVATSSDDGSVKLW 531
Score = 50.1 bits (118), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 80/169 (47%), Gaps = 23/169 (13%)
Query: 70 QCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHSEEGE---------FLKTLTGHTD 120
QC++ I H + V L G I ADK+ L E+ E L GH +
Sbjct: 205 QCEINI--HRL----VKLLKYGPIYERSADKSRYLRGEKIEKNWHSRPIMGSAILRGHEE 258
Query: 121 CVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYS--VAAHGDLITSGGE 178
V +++ V+ S+D +++VW G+ HT+ GH +++ ++ G I SG
Sbjct: 259 HVITCMQIHNDLLVTGSDDNTLKVWSIDDGEVKHTLNGHSGGVWTSQISQCGRYIVSGST 318
Query: 179 DQCVCVYQNKAQNSFMIPAM----SVWAVAILPNSDIVTGSSDGIVRVF 223
D+ V V+ +A++ F++ + S + N+ +VTGS D +RV+
Sbjct: 319 DRTVKVW--RAEDGFLLHTLQGHTSTVRCMAMANTTLVTGSRDCTLRVW 365
Score = 32.7 bits (73), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 55/132 (41%), Gaps = 19/132 (14%)
Query: 3 KLSTALYGHSMDVRSLSVTPDGCIL-SASRDKSAKLW---KP------------NDLSPG 46
K L GHS V SL + I+ S S D S ++W +P L+ G
Sbjct: 411 KCLRTLIGHSNRVYSLLYESERSIVCSGSLDTSIRVWDFSRPEGQELIAFLSGHTSLTSG 470
Query: 47 AKV--NTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKL 104
++ N L+S + D ++W + C + H A+ + G++ T D ++KL
Sbjct: 471 MQLRGNILVSCNADSHVRVWDIYEGTCIHILSGHRSAITSLQWFGRGLVATSSDDGSVKL 530
Query: 105 HS-EEGEFLKTL 115
E G ++ L
Sbjct: 531 WDIERGVLIRDL 542
>sp|B4P6P9|LIS1_DROYA Lissencephaly-1 homolog OS=Drosophila yakuba GN=Lis-1 PE=3 SV=1
Length = 411
Score = 86.7 bits (213), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 105/232 (45%), Gaps = 48/232 (20%)
Query: 2 YKLSTALYGHSMDVRSLSVTPDG-CILSASRDKSAKLWKPNDLSPGAKVNT--------- 51
Y+ ++GH +V S++ P G +LSASRD++ K+W +++ G V T
Sbjct: 183 YECIKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMW---EVATGYCVKTYTGHREWVR 239
Query: 52 ----------LLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG---------- 91
+ S D T ++W S+ CK+ +R HE V +
Sbjct: 240 MVRVHIEGSIFATCSNDQTIRVWLTNSKDCKVELRDHEHTVECIAWAPEAAASAINEAAG 299
Query: 92 -----------IIVTGCADKTIKLHSEE-GEFLKTLTGHTDCVRGLAVLNDTDF-VSCSN 138
+ +G DKTI++ G L TL+GH + VRGLA + VS S+
Sbjct: 300 ADNKKGHHQGPFLASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPGGKYLVSASD 359
Query: 139 DASIRVWDSTTGKCVHTMYGHPNFIYSVAAHGD--LITSGGEDQCVCVYQNK 188
D +IRVWD +C+ T+Y H +F S+ H + SG DQ V V++ +
Sbjct: 360 DKTIRVWDLRNKRCMKTLYAHQHFCTSIDFHKAHPYVISGSVDQTVKVWECR 411
Score = 67.4 bits (163), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 78/146 (53%), Gaps = 6/146 (4%)
Query: 52 LLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGC-ADKTIKL--HSEE 108
++SAS D T ++W E+ + + +++ H +V V A G ++ C AD +IKL +
Sbjct: 123 MVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAFDAQGKLLASCSADLSIKLWDFQQS 182
Query: 109 GEFLKTLTGHTDCVRGLAVLNDTDFV-SCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVA 167
E +KT+ GH V +A + D+V S S D +I++W+ TG CV T GH ++ V
Sbjct: 183 YECIKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEVATGYCVKTYTGHREWVRMVR 242
Query: 168 AH--GDLITSGGEDQCVCVYQNKAQN 191
H G + + DQ + V+ +++
Sbjct: 243 VHIEGSIFATCSNDQTIRVWLTNSKD 268
Score = 41.6 bits (96), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 53/99 (53%), Gaps = 9/99 (9%)
Query: 133 FVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVA--AHGDLITSGGEDQCVCVYQNKAQ 190
VS S DA+IR+WD TG+ ++ GH + + VA A G L+ S D + ++ + Q
Sbjct: 123 MVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAFDAQGKLLASCSADLSIKLWDFQ-Q 181
Query: 191 NSFMIPAM-----SVWAVAILPNSD-IVTGSSDGIVRVF 223
+ I M +V +VA +P D +++ S D ++++
Sbjct: 182 SYECIKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMW 220
>sp|B3NPW0|LIS1_DROER Lissencephaly-1 homolog OS=Drosophila erecta GN=Lis-1 PE=3 SV=1
Length = 411
Score = 86.7 bits (213), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 105/232 (45%), Gaps = 48/232 (20%)
Query: 2 YKLSTALYGHSMDVRSLSVTPDG-CILSASRDKSAKLWKPNDLSPGAKVNT--------- 51
Y+ ++GH +V S++ P G +LSASRD++ K+W +++ G V T
Sbjct: 183 YECIKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMW---EVATGYCVKTYTGHREWVR 239
Query: 52 ----------LLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG---------- 91
+ S D T ++W S+ CK+ +R HE V +
Sbjct: 240 MVRVHIEGSIFATCSNDQTIRVWLTNSKDCKVELRDHEHTVECIAWAPEAAASAINEAAG 299
Query: 92 -----------IIVTGCADKTIKLHSEE-GEFLKTLTGHTDCVRGLAVLNDTDF-VSCSN 138
+ +G DKTI++ G L TL+GH + VRGLA + VS S+
Sbjct: 300 ADNKKGHHQGPFLASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPGGKYLVSASD 359
Query: 139 DASIRVWDSTTGKCVHTMYGHPNFIYSVAAHGD--LITSGGEDQCVCVYQNK 188
D +IRVWD +C+ T+Y H +F S+ H + SG DQ V V++ +
Sbjct: 360 DKTIRVWDLRNKRCMKTLYAHQHFCTSIDFHKAHPYVISGSVDQTVKVWECR 411
Score = 67.4 bits (163), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 78/146 (53%), Gaps = 6/146 (4%)
Query: 52 LLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGC-ADKTIKL--HSEE 108
++SAS D T ++W E+ + + +++ H +V V A G ++ C AD +IKL +
Sbjct: 123 MVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAFDAQGKLLASCSADLSIKLWDFQQS 182
Query: 109 GEFLKTLTGHTDCVRGLAVLNDTDFV-SCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVA 167
E +KT+ GH V +A + D+V S S D +I++W+ TG CV T GH ++ V
Sbjct: 183 YECIKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEVATGYCVKTYTGHREWVRMVR 242
Query: 168 AH--GDLITSGGEDQCVCVYQNKAQN 191
H G + + DQ + V+ +++
Sbjct: 243 VHIEGSIFATCSNDQTIRVWLTNSKD 268
Score = 41.6 bits (96), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 53/99 (53%), Gaps = 9/99 (9%)
Query: 133 FVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVA--AHGDLITSGGEDQCVCVYQNKAQ 190
VS S DA+IR+WD TG+ ++ GH + + VA A G L+ S D + ++ + Q
Sbjct: 123 MVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAFDAQGKLLASCSADLSIKLWDFQ-Q 181
Query: 191 NSFMIPAM-----SVWAVAILPNSD-IVTGSSDGIVRVF 223
+ I M +V +VA +P D +++ S D ++++
Sbjct: 182 SYECIKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMW 220
>sp|B4QHG6|LIS1_DROSI Lissencephaly-1 homolog OS=Drosophila simulans GN=Lis-1 PE=3 SV=1
Length = 411
Score = 86.7 bits (213), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 105/232 (45%), Gaps = 48/232 (20%)
Query: 2 YKLSTALYGHSMDVRSLSVTPDG-CILSASRDKSAKLWKPNDLSPGAKVNT--------- 51
Y+ ++GH +V S++ P G +LSASRD++ K+W +++ G V T
Sbjct: 183 YECIKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMW---EVATGYCVKTYTGHREWVR 239
Query: 52 ----------LLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG---------- 91
+ S D T ++W S+ CK+ +R HE V +
Sbjct: 240 MVRVHIEGSIFATCSNDQTIRVWLTNSKDCKVELRDHEHTVECIAWAPEAAASAINEAAG 299
Query: 92 -----------IIVTGCADKTIKLHSEE-GEFLKTLTGHTDCVRGLAVLNDTDF-VSCSN 138
+ +G DKTI++ G L TL+GH + VRGLA + VS S+
Sbjct: 300 ADNKKGHHQGPFLASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPGGKYLVSASD 359
Query: 139 DASIRVWDSTTGKCVHTMYGHPNFIYSVAAHGD--LITSGGEDQCVCVYQNK 188
D +IRVWD +C+ T+Y H +F S+ H + SG DQ V V++ +
Sbjct: 360 DKTIRVWDLRNKRCMKTLYAHQHFCTSIDFHKAHPYVISGSVDQTVKVWECR 411
Score = 67.0 bits (162), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 78/146 (53%), Gaps = 6/146 (4%)
Query: 52 LLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGC-ADKTIKL--HSEE 108
++SAS D T ++W E+ + + +++ H +V V A G ++ C AD +IKL +
Sbjct: 123 MVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAFDAQGKLLASCSADLSIKLWDFQQS 182
Query: 109 GEFLKTLTGHTDCVRGLAVLNDTDFV-SCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVA 167
E +KT+ GH V +A + D+V S S D +I++W+ TG CV T GH ++ V
Sbjct: 183 YECIKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEVATGYCVKTYTGHREWVRMVR 242
Query: 168 AH--GDLITSGGEDQCVCVYQNKAQN 191
H G + + DQ + V+ +++
Sbjct: 243 VHIEGSIFATCSNDQTIRVWLTNSKD 268
Score = 41.6 bits (96), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 53/99 (53%), Gaps = 9/99 (9%)
Query: 133 FVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVA--AHGDLITSGGEDQCVCVYQNKAQ 190
VS S DA+IR+WD TG+ ++ GH + + VA A G L+ S D + ++ + Q
Sbjct: 123 MVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAFDAQGKLLASCSADLSIKLWDFQ-Q 181
Query: 191 NSFMIPAM-----SVWAVAILPNSD-IVTGSSDGIVRVF 223
+ I M +V +VA +P D +++ S D ++++
Sbjct: 182 SYECIKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMW 220
>sp|B4HSL3|LIS1_DROSE Lissencephaly-1 homolog OS=Drosophila sechellia GN=Lis-1 PE=3 SV=1
Length = 411
Score = 86.7 bits (213), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 105/232 (45%), Gaps = 48/232 (20%)
Query: 2 YKLSTALYGHSMDVRSLSVTPDG-CILSASRDKSAKLWKPNDLSPGAKVNT--------- 51
Y+ ++GH +V S++ P G +LSASRD++ K+W +++ G V T
Sbjct: 183 YECIKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMW---EVATGYCVKTYTGHREWVR 239
Query: 52 ----------LLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG---------- 91
+ S D T ++W S+ CK+ +R HE V +
Sbjct: 240 MVRVHIEGSIFATCSNDQTIRVWLTNSKDCKVELRDHEHTVECIAWAPEAAASAINEAAG 299
Query: 92 -----------IIVTGCADKTIKLHSEE-GEFLKTLTGHTDCVRGLAVLNDTDF-VSCSN 138
+ +G DKTI++ G L TL+GH + VRGLA + VS S+
Sbjct: 300 ADNKKGHHQGPFLASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPGGKYLVSASD 359
Query: 139 DASIRVWDSTTGKCVHTMYGHPNFIYSVAAHGD--LITSGGEDQCVCVYQNK 188
D +IRVWD +C+ T+Y H +F S+ H + SG DQ V V++ +
Sbjct: 360 DKTIRVWDLRNKRCMKTLYAHQHFCTSIDFHKAHPYVISGSVDQTVKVWECR 411
Score = 67.0 bits (162), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 78/146 (53%), Gaps = 6/146 (4%)
Query: 52 LLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGC-ADKTIKL--HSEE 108
++SAS D T ++W E+ + + +++ H +V V A G ++ C AD +IKL +
Sbjct: 123 MVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAFDAQGKLLASCSADLSIKLWDFQQS 182
Query: 109 GEFLKTLTGHTDCVRGLAVLNDTDFV-SCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVA 167
E +KT+ GH V +A + D+V S S D +I++W+ TG CV T GH ++ V
Sbjct: 183 YECIKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEVATGYCVKTYTGHREWVRMVR 242
Query: 168 AH--GDLITSGGEDQCVCVYQNKAQN 191
H G + + DQ + V+ +++
Sbjct: 243 VHIEGSIFATCSNDQTIRVWLTNSKD 268
Score = 41.6 bits (96), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 53/99 (53%), Gaps = 9/99 (9%)
Query: 133 FVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVA--AHGDLITSGGEDQCVCVYQNKAQ 190
VS S DA+IR+WD TG+ ++ GH + + VA A G L+ S D + ++ + Q
Sbjct: 123 MVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAFDAQGKLLASCSADLSIKLWDFQ-Q 181
Query: 191 NSFMIPAM-----SVWAVAILPNSD-IVTGSSDGIVRVF 223
+ I M +V +VA +P D +++ S D ++++
Sbjct: 182 SYECIKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMW 220
>sp|Q7KNS3|LIS1_DROME Lissencephaly-1 homolog OS=Drosophila melanogaster GN=Lis-1 PE=1
SV=2
Length = 411
Score = 86.7 bits (213), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 105/232 (45%), Gaps = 48/232 (20%)
Query: 2 YKLSTALYGHSMDVRSLSVTPDG-CILSASRDKSAKLWKPNDLSPGAKVNT--------- 51
Y+ ++GH +V S++ P G +LSASRD++ K+W +++ G V T
Sbjct: 183 YECIKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMW---EVATGYCVKTYTGHREWVR 239
Query: 52 ----------LLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG---------- 91
+ S D T ++W S+ CK+ +R HE V +
Sbjct: 240 MVRVHIEGSIFATCSNDQTIRVWLTNSKDCKVELRDHEHTVECIAWAPEAAASAINEAAG 299
Query: 92 -----------IIVTGCADKTIKLHSEE-GEFLKTLTGHTDCVRGLAVLNDTDF-VSCSN 138
+ +G DKTI++ G L TL+GH + VRGLA + VS S+
Sbjct: 300 ADNKKGHHQGPFLASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPGGKYLVSASD 359
Query: 139 DASIRVWDSTTGKCVHTMYGHPNFIYSVAAHGD--LITSGGEDQCVCVYQNK 188
D +IRVWD +C+ T+Y H +F S+ H + SG DQ V V++ +
Sbjct: 360 DKTIRVWDLRNKRCMKTLYAHQHFCTSIDFHKAHPYVISGSVDQTVKVWECR 411
Score = 67.0 bits (162), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 78/146 (53%), Gaps = 6/146 (4%)
Query: 52 LLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGC-ADKTIKL--HSEE 108
++SAS D T ++W E+ + + +++ H +V V A G ++ C AD +IKL +
Sbjct: 123 MVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAFDAQGKLLASCSADLSIKLWDFQQS 182
Query: 109 GEFLKTLTGHTDCVRGLAVLNDTDFV-SCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVA 167
E +KT+ GH V +A + D+V S S D +I++W+ TG CV T GH ++ V
Sbjct: 183 YECIKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEVATGYCVKTYTGHREWVRMVR 242
Query: 168 AH--GDLITSGGEDQCVCVYQNKAQN 191
H G + + DQ + V+ +++
Sbjct: 243 VHIEGSIFATCSNDQTIRVWLTNSKD 268
Score = 41.6 bits (96), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 53/99 (53%), Gaps = 9/99 (9%)
Query: 133 FVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVA--AHGDLITSGGEDQCVCVYQNKAQ 190
VS S DA+IR+WD TG+ ++ GH + + VA A G L+ S D + ++ + Q
Sbjct: 123 MVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAFDAQGKLLASCSADLSIKLWDFQ-Q 181
Query: 191 NSFMIPAM-----SVWAVAILPNSD-IVTGSSDGIVRVF 223
+ I M +V +VA +P D +++ S D ++++
Sbjct: 182 SYECIKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMW 220
>sp|B3MEY6|LIS1_DROAN Lissencephaly-1 homolog OS=Drosophila ananassae GN=Lis-1 PE=3 SV=1
Length = 411
Score = 86.3 bits (212), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 104/232 (44%), Gaps = 48/232 (20%)
Query: 2 YKLSTALYGHSMDVRSLSVTPDG-CILSASRDKSAKLWKPNDLSPGAKVNT--------- 51
Y+ ++GH +V S++ P G +LSASRD++ K+W +++ G V T
Sbjct: 183 YECVKTMHGHDHNVSSVAFVPAGDYVLSASRDRTVKMW---EVATGYCVKTYTGHREWVR 239
Query: 52 ----------LLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG---------- 91
+ S D T ++W S+ CK+ +R HE V +
Sbjct: 240 MVRVHIEGSIFATCSNDHTIRVWLTNSRDCKVELRDHEHTVECIAWAPEAAASAINEAAG 299
Query: 92 -----------IIVTGCADKTIKLHSEE-GEFLKTLTGHTDCVRGLAVLNDTDF-VSCSN 138
+ +G DKTI++ G L TL GH + VRGLA + VS S+
Sbjct: 300 ADNKKGHHQGPFLASGSRDKTIRIWDVSVGLCLFTLNGHDNWVRGLAFHPAGKYLVSASD 359
Query: 139 DASIRVWDSTTGKCVHTMYGHPNFIYSVAAHGD--LITSGGEDQCVCVYQNK 188
D +IRVWD +C+ T+Y H +F S+ H + SG DQ V V++ +
Sbjct: 360 DKTIRVWDLRNKRCMKTLYAHQHFCTSIDFHKAHPYVISGSVDQTVKVWECR 411
Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 77/146 (52%), Gaps = 6/146 (4%)
Query: 52 LLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGC-ADKTIKL--HSEE 108
++SAS D T K+W E+ + + +++ H +V V A G ++ C AD +IKL +
Sbjct: 123 VVSASEDATIKIWDFETGEYERSLKGHTDSVQDVAFDAQGKLLASCSADLSIKLWDFQQT 182
Query: 109 GEFLKTLTGHTDCVRGLAVLNDTDFV-SCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVA 167
E +KT+ GH V +A + D+V S S D ++++W+ TG CV T GH ++ V
Sbjct: 183 YECVKTMHGHDHNVSSVAFVPAGDYVLSASRDRTVKMWEVATGYCVKTYTGHREWVRMVR 242
Query: 168 AH--GDLITSGGEDQCVCVYQNKAQN 191
H G + + D + V+ +++
Sbjct: 243 VHIEGSIFATCSNDHTIRVWLTNSRD 268
Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 86/181 (47%), Gaps = 21/181 (11%)
Query: 7 ALYGHSMDVRSLSVTPD-GCILSASRDKSAKLW----------------KPNDLSPGAKV 49
++ GH + + P G ++SAS D + K+W D++ A+
Sbjct: 103 SMSGHRASITRVIFHPIFGLVVSASEDATIKIWDFETGEYERSLKGHTDSVQDVAFDAQG 162
Query: 50 NTLLSASWDMTAKLWCL-ESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKL-HS 106
L S S D++ KLW ++ +C T+ H+ V V + G +++ D+T+K+
Sbjct: 163 KLLASCSADLSIKLWDFQQTYECVKTMHGHDHNVSSVAFVPAGDYVLSASRDRTVKMWEV 222
Query: 107 EEGEFLKTLTGHTDCVRGLAV-LNDTDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYS 165
G +KT TGH + VR + V + + F +CSND +IRVW + + C + H + +
Sbjct: 223 ATGYCVKTYTGHREWVRMVRVHIEGSIFATCSNDHTIRVWLTNSRDCKVELRDHEHTVEC 282
Query: 166 V 166
+
Sbjct: 283 I 283
Score = 39.3 bits (90), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 9/98 (9%)
Query: 134 VSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVA--AHGDLITSGGEDQCVCVYQNKAQN 191
VS S DA+I++WD TG+ ++ GH + + VA A G L+ S D + ++ + Q
Sbjct: 124 VSASEDATIKIWDFETGEYERSLKGHTDSVQDVAFDAQGKLLASCSADLSIKLWDFQ-QT 182
Query: 192 SFMIPAM-----SVWAVAILPNSD-IVTGSSDGIVRVF 223
+ M +V +VA +P D +++ S D V+++
Sbjct: 183 YECVKTMHGHDHNVSSVAFVPAGDYVLSASRDRTVKMW 220
>sp|P87053|POF1_SCHPO F-box/WD repeat-containing protein pof1 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=pof1 PE=1 SV=1
Length = 605
Score = 85.9 bits (211), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 77/243 (31%), Positives = 112/243 (46%), Gaps = 35/243 (14%)
Query: 8 LYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND--------------LSPGAKVNTL 52
L GHS V L D C ++S S DK+ ++W L L
Sbjct: 309 LEGHSSGVTCLQF--DQCKLISGSMDKTIRIWNYRTSECISILHGHTDSVLCLTFDSTLL 366
Query: 53 LSASWDMTAKLWCLESQQCKLTIRQHEMAVWGV-IQLANGIIVTGCADKTIKLHS-EEGE 110
+S S D T KLW + ++T+R H V V I G++++G D TIK+ S E
Sbjct: 367 VSGSADCTVKLWHFSGGK-RITLRGHTGPVNSVRIIRDRGLVLSGSDDSTIKIWSLETNT 425
Query: 111 FLKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAAHG 170
L T + H V+ LA L D+ SCS D +I+ WD KCVHT++GH ++ +AA
Sbjct: 426 CLHTFSAHIGPVQSLA-LADSRLFSCSLDGTIKQWDIEKKKCVHTLFGHIEGVWEIAADH 484
Query: 171 DLITSGGED-------QCVCVYQNKAQNSFMIPAMSVWAVAILPNSDIVTGSSDGIVRVF 223
+ SG D C CV+ K + P SV L + ++V+GS DG + ++
Sbjct: 485 LRLISGAHDGVVKVWEACECVHTLKNHSE---PVTSV----ALGDCEVVSGSEDGKIYLW 537
Query: 224 SAN 226
N
Sbjct: 538 LFN 540
Score = 52.8 bits (125), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 70/143 (48%), Gaps = 5/143 (3%)
Query: 86 IQLANGIIVTGCADKTIKL-HSEEGEFLKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRV 144
+QL I+ +G D TI+L + + + L GH+ V L + +S S D +IR+
Sbjct: 279 LQLVRNILASGSYDATIRLWNLATFQQVALLEGHSSGVTCLQ-FDQCKLISGSMDKTIRI 337
Query: 145 WDSTTGKCVHTMYGHPNFIYSVAAHGDLITSGGEDQCVCVYQNKAQNSFMIPAMS--VWA 202
W+ T +C+ ++GH + + + L+ SG D V ++ + + V +
Sbjct: 338 WNYRTSECISILHGHTDSVLCLTFDSTLLVSGSADCTVKLWHFSGGKRITLRGHTGPVNS 397
Query: 203 VAILPNSDIV-TGSSDGIVRVFS 224
V I+ + +V +GS D ++++S
Sbjct: 398 VRIIRDRGLVLSGSDDSTIKIWS 420
Score = 37.0 bits (84), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 56/111 (50%), Gaps = 3/111 (2%)
Query: 115 LTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAAHGDLIT 174
L+GH+D V L ++ + S S DA+IR+W+ T + V + GH + + + +
Sbjct: 269 LSGHSDGVMCLQLVRNI-LASGSYDATIRLWNLATFQQVALLEGHSSGVTCLQFDQCKLI 327
Query: 175 SGGEDQCVCVYQNKAQNSFMIPAMSVWAVAILP--NSDIVTGSSDGIVRVF 223
SG D+ + ++ + I +V L ++ +V+GS+D V+++
Sbjct: 328 SGSMDKTIRIWNYRTSECISILHGHTDSVLCLTFDSTLLVSGSADCTVKLW 378
>sp|A7S338|LIS1_NEMVE Lissencephaly-1 homolog OS=Nematostella vectensis GN=v1g242515 PE=3
SV=1
Length = 409
Score = 85.9 bits (211), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 107/230 (46%), Gaps = 43/230 (18%)
Query: 2 YKLSTALYGHSMDVRSLSVTPDG-CILSASRDKSAKLWK----------------PNDLS 44
++ L+GH +V S+S P G ++SASRDK+ K+W+ +
Sbjct: 180 FECIRTLHGHDHNVSSISFLPSGDHLVSASRDKTIKMWEIATGYCVKTFQGHGEWVRRVR 239
Query: 45 PGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAV----WG------VIQLANGI-- 92
P A + + S S D T ++W + S++CK +R H+ + W VI A G+
Sbjct: 240 PNADGSLIASCSNDQTIRVWVVASRECKCDLRDHDHVIEDLNWAPESATPVINEAAGVEG 299
Query: 93 ----------IVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDTDF-VSCSNDA 140
+V+ DK+IK+ G L TL GH + VR + F VSCS+D
Sbjct: 300 GKKAMSPGPFLVSASRDKSIKIWDVSAGVCLVTLVGHDNWVRAVMFHPGGKFIVSCSDDK 359
Query: 141 SIRVWDSTTGKCVHTMYGHPNFIYSVAAH--GDLITSGGEDQCVCVYQNK 188
++R+WD +C T+ H +F+ ++ H + +G D + V++ +
Sbjct: 360 TLRIWDYKNKRCAKTLVAHEHFVTTLDFHKSAPFVATGSVDLTLKVWECR 409
Score = 63.9 bits (154), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 74/140 (52%), Gaps = 8/140 (5%)
Query: 92 IIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDTDFV-SCSNDASIRVWDSTT 149
++VT D T+K+ E G+F +TL GHTD V+ LA + F+ S S D +I++WD
Sbjct: 120 VMVTSSEDATVKVWDYETGDFERTLKGHTDAVQDLAFDHTGKFLASSSADMTIKLWDFQG 179
Query: 150 GKCVHTMYGHPNFIYSVA--AHGDLITSGGEDQCVCVYQNKAQNSF-MIPAMSVWAVAIL 206
+C+ T++GH + + S++ GD + S D+ + +++ W +
Sbjct: 180 FECIRTLHGHDHNVSSISFLPSGDHLVSASRDKTIKMWEIATGYCVKTFQGHGEWVRRVR 239
Query: 207 PNSD---IVTGSSDGIVRVF 223
PN+D I + S+D +RV+
Sbjct: 240 PNADGSLIASCSNDQTIRVW 259
Score = 58.9 bits (141), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 60/115 (52%), Gaps = 3/115 (2%)
Query: 52 LLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGI-IVTGCADKTIKL-HSEEG 109
L S+S DMT KLW + +C T+ H+ V + L +G +V+ DKTIK+ G
Sbjct: 163 LASSSADMTIKLWDFQGFECIRTLHGHDHNVSSISFLPSGDHLVSASRDKTIKMWEIATG 222
Query: 110 EFLKTLTGHTDCVRGLAVLNDTDFV-SCSNDASIRVWDSTTGKCVHTMYGHPNFI 163
+KT GH + VR + D + SCSND +IRVW + +C + H + I
Sbjct: 223 YCVKTFQGHGEWVRRVRPNADGSLIASCSNDQTIRVWVVASRECKCDLRDHDHVI 277
>sp|B4KT48|LIS1_DROMO Lissencephaly-1 homolog OS=Drosophila mojavensis GN=Lis-1 PE=3 SV=1
Length = 411
Score = 85.5 bits (210), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 104/232 (44%), Gaps = 48/232 (20%)
Query: 2 YKLSTALYGHSMDVRSLSVTPDG-CILSASRDKSAKLWKPNDLSPGAKVNT--------- 51
Y+ ++GH +V S++ P G +LSASRD++ K+W +++ G V T
Sbjct: 183 YECVKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMW---EVATGYCVKTYTGHREWVR 239
Query: 52 ----------LLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG---------- 91
+ S D T ++W S+ CK+ +R HE V +
Sbjct: 240 MVRVHIEGSIFATCSNDHTIRVWLTNSKDCKVELRDHEHTVECIAWAPEAAASAINEAAG 299
Query: 92 -----------IIVTGCADKTIKLHSEE-GEFLKTLTGHTDCVRGLAVLNDTDF-VSCSN 138
+ +G DKTI++ G L TL GH + VRGLA + VS S+
Sbjct: 300 ADNKKGHHQGPFLASGSRDKTIRIWDVSVGLCLLTLNGHDNWVRGLAFHPGGKYLVSASD 359
Query: 139 DASIRVWDSTTGKCVHTMYGHPNFIYSVAAHGD--LITSGGEDQCVCVYQNK 188
D +IRVWD +C+ T+Y H +F S+ H + SG DQ V V++ +
Sbjct: 360 DKTIRVWDLRNKRCMKTLYAHQHFCTSIDFHKAHPYVISGSVDQSVKVWECR 411
Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 77/146 (52%), Gaps = 6/146 (4%)
Query: 52 LLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGC-ADKTIKL--HSEE 108
++SAS D T K+W E+ + + +++ H +V V A G ++ C AD +IKL +
Sbjct: 123 MVSASEDATIKIWDFETGEYERSLKGHTDSVQDVAFDAQGKLLASCSADLSIKLWDFQQS 182
Query: 109 GEFLKTLTGHTDCVRGLAVLNDTDFV-SCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVA 167
E +KT+ GH V +A + D+V S S D +I++W+ TG CV T GH ++ V
Sbjct: 183 YECVKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEVATGYCVKTYTGHREWVRMVR 242
Query: 168 AH--GDLITSGGEDQCVCVYQNKAQN 191
H G + + D + V+ +++
Sbjct: 243 VHIEGSIFATCSNDHTIRVWLTNSKD 268
Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 86/181 (47%), Gaps = 21/181 (11%)
Query: 7 ALYGHSMDVRSLSVTPD-GCILSASRDKSAKLW----------------KPNDLSPGAKV 49
+L GH + + P G ++SAS D + K+W D++ A+
Sbjct: 103 SLTGHRASITRVIFHPIFGLMVSASEDATIKIWDFETGEYERSLKGHTDSVQDVAFDAQG 162
Query: 50 NTLLSASWDMTAKLWCL-ESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKL-HS 106
L S S D++ KLW +S +C T+ H+ V V + G +++ D+TIK+
Sbjct: 163 KLLASCSADLSIKLWDFQQSYECVKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEV 222
Query: 107 EEGEFLKTLTGHTDCVRGLAV-LNDTDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYS 165
G +KT TGH + VR + V + + F +CSND +IRVW + + C + H + +
Sbjct: 223 ATGYCVKTYTGHREWVRMVRVHIEGSIFATCSNDHTIRVWLTNSKDCKVELRDHEHTVEC 282
Query: 166 V 166
+
Sbjct: 283 I 283
Score = 39.3 bits (90), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 53/99 (53%), Gaps = 9/99 (9%)
Query: 133 FVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVA--AHGDLITSGGEDQCVCVYQNKAQ 190
VS S DA+I++WD TG+ ++ GH + + VA A G L+ S D + ++ + Q
Sbjct: 123 MVSASEDATIKIWDFETGEYERSLKGHTDSVQDVAFDAQGKLLASCSADLSIKLWDFQ-Q 181
Query: 191 NSFMIPAM-----SVWAVAILPNSD-IVTGSSDGIVRVF 223
+ + M +V +VA +P D +++ S D ++++
Sbjct: 182 SYECVKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMW 220
>sp|B4MY65|LIS1_DROWI Lissencephaly-1 homolog OS=Drosophila willistoni GN=Lis-1 PE=3 SV=1
Length = 409
Score = 85.1 bits (209), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 103/232 (44%), Gaps = 48/232 (20%)
Query: 2 YKLSTALYGHSMDVRSLSVTPDG-CILSASRDKSAKLWKPNDLSPGAKVNT--------- 51
Y ++GH +V S++ P G +LSASRD++ K+W +++ G V T
Sbjct: 181 YACVKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMW---EVATGYCVKTYTGHREWVR 237
Query: 52 ----------LLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG---------- 91
+ S D T ++W S+ CK+ +R HE V +
Sbjct: 238 MVRVHIEGSLFATCSNDHTIRVWLTNSKDCKVELRDHEHTVECIAWAPEAAASAINEAAG 297
Query: 92 -----------IIVTGCADKTIKLHSEE-GEFLKTLTGHTDCVRGLAVLNDTDF-VSCSN 138
+ +G DKTI++ G L TL GH + VRGLA + VS S+
Sbjct: 298 ADNKKGHHQGPFLASGSRDKTIRIWDVSVGLCLLTLNGHDNWVRGLAFHPGGKYLVSASD 357
Query: 139 DASIRVWDSTTGKCVHTMYGHPNFIYSVAAHGD--LITSGGEDQCVCVYQNK 188
D +IRVWD +C+ T+Y H +F S+ H + SG DQ V V++ +
Sbjct: 358 DKTIRVWDLRNKRCMKTLYAHQHFCTSIDFHKAHPYVISGSVDQTVKVWECR 409
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 77/146 (52%), Gaps = 6/146 (4%)
Query: 52 LLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGC-ADKTIKLHSEEGE 110
++SAS D T K+W E+ + + +++ H +V V A G ++ C AD +IKL +
Sbjct: 121 MVSASEDATIKIWDFETGEYERSLKGHTDSVQDVAFDAQGKLLVSCSADLSIKLWDFQQS 180
Query: 111 F--LKTLTGHTDCVRGLAVLNDTDFV-SCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVA 167
+ +KT+ GH V +A + D+V S S D +I++W+ TG CV T GH ++ V
Sbjct: 181 YACVKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEVATGYCVKTYTGHREWVRMVR 240
Query: 168 AH--GDLITSGGEDQCVCVYQNKAQN 191
H G L + D + V+ +++
Sbjct: 241 VHIEGSLFATCSNDHTIRVWLTNSKD 266
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 86/181 (47%), Gaps = 21/181 (11%)
Query: 7 ALYGHSMDVRSLSVTPD-GCILSASRDKSAKLW----------------KPNDLSPGAKV 49
+L GH + + P G ++SAS D + K+W D++ A+
Sbjct: 101 SLTGHRASITRVIFHPIFGLMVSASEDATIKIWDFETGEYERSLKGHTDSVQDVAFDAQG 160
Query: 50 NTLLSASWDMTAKLWCL-ESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKL-HS 106
L+S S D++ KLW +S C T+ H+ V V + G +++ D+TIK+
Sbjct: 161 KLLVSCSADLSIKLWDFQQSYACVKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEV 220
Query: 107 EEGEFLKTLTGHTDCVRGLAV-LNDTDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYS 165
G +KT TGH + VR + V + + F +CSND +IRVW + + C + H + +
Sbjct: 221 ATGYCVKTYTGHREWVRMVRVHIEGSLFATCSNDHTIRVWLTNSKDCKVELRDHEHTVEC 280
Query: 166 V 166
+
Sbjct: 281 I 281
Score = 39.7 bits (91), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 53/99 (53%), Gaps = 9/99 (9%)
Query: 133 FVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVA--AHGDLITSGGEDQCVCVYQNKAQ 190
VS S DA+I++WD TG+ ++ GH + + VA A G L+ S D + ++ + Q
Sbjct: 121 MVSASEDATIKIWDFETGEYERSLKGHTDSVQDVAFDAQGKLLVSCSADLSIKLWDFQ-Q 179
Query: 191 NSFMIPAM-----SVWAVAILPNSD-IVTGSSDGIVRVF 223
+ + M +V +VA +P D +++ S D ++++
Sbjct: 180 SYACVKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMW 218
>sp|C3XVT5|LIS1_BRAFL Lissencephaly-1 homolog OS=Branchiostoma floridae
GN=BRAFLDRAFT_59218 PE=3 SV=1
Length = 406
Score = 84.3 bits (207), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 106/224 (47%), Gaps = 46/224 (20%)
Query: 8 LYGHSMDVRSLSVTPDG-CILSASRDKSAKLWKPNDLSPGAKVNT--------------- 51
++GH +V S+ P+G ++SASRDK+ K+W +L+ G V T
Sbjct: 186 MHGHDHNVSSVHFMPNGDFLISASRDKTIKMW---ELATGYCVKTFTGHREWVRTVRVNQ 242
Query: 52 ----LLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVI---QLANG------------- 91
L S S D T ++W + +++CK +R+HE V + + NG
Sbjct: 243 DGSLLASCSNDQTVRVWVVANKECKAELREHEHVVECIAWAPESCNGHVSEVMGAEKKGR 302
Query: 92 ---IIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDTDFV-SCSNDASIRVWD 146
+++G DKTIK+ G + TL GH + VRG+ ++ S S+D +IRVWD
Sbjct: 303 SGPFLLSGSRDKTIKMWDISTGVCIMTLVGHDNWVRGVVWHPGGKYIISASDDKTIRVWD 362
Query: 147 STTGKCVHTMYGHPNFIYSVAAH--GDLITSGGEDQCVCVYQNK 188
+C T+ H +F S+ H + +G DQ V V++ +
Sbjct: 363 YKNKRCQKTLEAHQHFCTSIDFHRSAPYVITGSVDQTVKVWECR 406
Score = 70.5 bits (171), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 76/141 (53%), Gaps = 5/141 (3%)
Query: 50 NTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGC-ADKTIKLHS-E 107
+ ++SAS D T K+W E+ + T++ H AV V G ++ C AD TIKL +
Sbjct: 119 SVMVSASEDATIKIWDYETGDFERTLKGHTDAVQDVSFDQQGKLLASCSADMTIKLWDFQ 178
Query: 108 EGEFLKTLTGHTDCVRGLAVLNDTDF-VSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSV 166
E +KT+ GH V + + + DF +S S D +I++W+ TG CV T GH ++ +V
Sbjct: 179 TFENIKTMHGHDHNVSSVHFMPNGDFLISASRDKTIKMWELATGYCVKTFTGHREWVRTV 238
Query: 167 AAH--GDLITSGGEDQCVCVY 185
+ G L+ S DQ V V+
Sbjct: 239 RVNQDGSLLASCSNDQTVRVW 259
Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 83/181 (45%), Gaps = 20/181 (11%)
Query: 7 ALYGHSMDVRSLSVTP-DGCILSASRDKSAKLWK----------------PNDLSPGAKV 49
+L GH + + P ++SAS D + K+W D+S +
Sbjct: 101 SLSGHRSPITRVLFHPVYSVMVSASEDATIKIWDYETGDFERTLKGHTDAVQDVSFDQQG 160
Query: 50 NTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHS-E 107
L S S DMT KLW ++ + T+ H+ V V + NG +++ DKTIK+
Sbjct: 161 KLLASCSADMTIKLWDFQTFENIKTMHGHDHNVSSVHFMPNGDFLISASRDKTIKMWELA 220
Query: 108 EGEFLKTLTGHTDCVRGLAVLNDTDFV-SCSNDASIRVWDSTTGKCVHTMYGHPNFIYSV 166
G +KT TGH + VR + V D + SCSND ++RVW +C + H + + +
Sbjct: 221 TGYCVKTFTGHREWVRTVRVNQDGSLLASCSNDQTVRVWVVANKECKAELREHEHVVECI 280
Query: 167 A 167
A
Sbjct: 281 A 281
Score = 39.3 bits (90), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 49/99 (49%), Gaps = 10/99 (10%)
Query: 133 FVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVA--AHGDLITSGGEDQCVCVYQNKAQ 190
VS S DA+I++WD TG T+ GH + + V+ G L+ S D + ++ Q
Sbjct: 121 MVSASEDATIKIWDYETGDFERTLKGHTDAVQDVSFDQQGKLLASCSADMTIKLWD--FQ 178
Query: 191 NSFMIPAM-----SVWAVAILPNSD-IVTGSSDGIVRVF 223
I M +V +V +PN D +++ S D ++++
Sbjct: 179 TFENIKTMHGHDHNVSSVHFMPNGDFLISASRDKTIKMW 217
>sp|Q05946|UTP13_YEAST U3 small nucleolar RNA-associated protein 13 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=UTP13 PE=1
SV=1
Length = 817
Score = 84.0 bits (206), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 90/176 (51%), Gaps = 30/176 (17%)
Query: 9 YGHSMDVRSLSVTPDGCILSASRDKSAKLWKPNDLSPGAKVNTLLSASWDMTAKLWCLES 68
+ H D+ +LSV+P+ I + +AS+D T K+W LE+
Sbjct: 488 HAHEKDINALSVSPNDSIFA-------------------------TASYDKTCKIWNLEN 522
Query: 69 QQCKLTIRQHEMAVWGV-IQLANGIIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLA 126
+ + T+ H+ +W V + ++ T DKT+K+ S + +KTL GHT+ V+ +
Sbjct: 523 GELEATLANHKRGLWDVSFCQYDKLLATSSGDKTVKIWSLDTFSVMKTLEGHTNAVQRCS 582
Query: 127 VLN-DTDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGED 179
+N +SC D I++WD ++G+C+ T+ GH N +++++ GD+I S D
Sbjct: 583 FINKQKQLISCGADGLIKIWDCSSGECLKTLDGHNNRLWALSTMNDGDMIVSADAD 638
>sp|Q00808|HETE1_PODAS Vegetative incompatibility protein HET-E-1 OS=Podospora anserina
GN=HET-E1 PE=4 SV=1
Length = 1356
Score = 81.6 bits (200), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 116/247 (46%), Gaps = 32/247 (12%)
Query: 8 LYGHSMDVRSLSVTPDG-CILSASRDKSAKLWKPNDLSPGAKVNTL-------------- 52
L GH V+S++ +PDG + S S D + K+W D + G TL
Sbjct: 921 LEGHGGRVQSVAFSPDGQRVASGSDDHTIKIW---DAASGTCTQTLEGHGSSVLSVAFSP 977
Query: 53 -----LSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKL-H 105
S S D T K+W S C T+ H +VW V +G + +G DKTIK+
Sbjct: 978 DGQRVASGSGDKTIKIWDTASGTCTQTLEGHGGSVWSVAFSPDGQRVASGSDDKTIKIWD 1037
Query: 106 SEEGEFLKTLTGHTDCVRGLAVLNDTDFV-SCSNDASIRVWDSTTGKCVHTMYGHPNFIY 164
+ G +TL GH V+ + D V S S+D +I++WD+ +G C T+ GH + ++
Sbjct: 1038 TASGTCTQTLEGHGGWVQSVVFSPDGQRVASGSDDHTIKIWDAVSGTCTQTLEGHGDSVW 1097
Query: 165 SVA--AHGDLITSGGEDQCVCVYQNKAQN-SFMIPAMSVW--AVAILPNSD-IVTGSSDG 218
SVA G + SG D + ++ + + + W +VA P+ + +GS DG
Sbjct: 1098 SVAFSPDGQRVASGSIDGTIKIWDAASGTCTQTLEGHGGWVHSVAFSPDGQRVASGSIDG 1157
Query: 219 IVRVFSA 225
++++ A
Sbjct: 1158 TIKIWDA 1164
Score = 67.0 bits (162), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 91/203 (44%), Gaps = 28/203 (13%)
Query: 8 LYGHSMDVRSLSVTPDG-CILSASRDKSAKLWKPNDLSPGAKVNTL-------------- 52
L GH V+S+ +PDG + S S D + K+W D G TL
Sbjct: 1047 LEGHGGWVQSVVFSPDGQRVASGSDDHTIKIW---DAVSGTCTQTLEGHGDSVWSVAFSP 1103
Query: 53 -----LSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKL-H 105
S S D T K+W S C T+ H V V +G + +G D TIK+
Sbjct: 1104 DGQRVASGSIDGTIKIWDAASGTCTQTLEGHGGWVHSVAFSPDGQRVASGSIDGTIKIWD 1163
Query: 106 SEEGEFLKTLTGHTDCVRGLAVLNDTDFV-SCSNDASIRVWDSTTGKCVHTMYGHPNFIY 164
+ G +TL GH V+ +A D V S S+D +I++WD+ +G C T+ GH ++
Sbjct: 1164 AASGTCTQTLEGHGGWVQSVAFSPDGQRVASGSSDKTIKIWDTASGTCTQTLEGHGGWVQ 1223
Query: 165 SVA--AHGDLITSGGEDQCVCVY 185
SVA G + SG D + ++
Sbjct: 1224 SVAFSPDGQRVASGSSDNTIKIW 1246
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 107/237 (45%), Gaps = 21/237 (8%)
Query: 7 ALYGHSMDVRSLSVTPDGCILSASRD-----------KSAKLWKPNDLSPGAKVNTLLSA 55
+L GH++ R +++ DG + S SA ++ P D S K+
Sbjct: 759 SLLGHTIRGRLIAIVRDGYRFALSYRMIIEKAPLQAYTSALVFAPTD-SMIKKIFKKEEP 817
Query: 56 SWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKL-HSEEGEFLK 113
W T + E C T+ H +V V A+G + +G DKTIK+ + G +
Sbjct: 818 GWISTISVVEAEWNACTQTLEGHGSSVLSVAFSADGQRVASGSDDKTIKIWDTASGTGTQ 877
Query: 114 TLTGHTDCVRGLAVLNDTDFV-SCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVA--AHG 170
TL GH V +A D + V S S+D +I++WD+ +G C T+ GH + SVA G
Sbjct: 878 TLEGHGGSVWSVAFSPDRERVASGSDDKTIKIWDAASGTCTQTLEGHGGRVQSVAFSPDG 937
Query: 171 DLITSGGEDQCVCVY---QNKAQNSFMIPAMSVWAVAILPNSD-IVTGSSDGIVRVF 223
+ SG +D + ++ + SV +VA P+ + +GS D ++++
Sbjct: 938 QRVASGSDDHTIKIWDAASGTCTQTLEGHGSSVLSVAFSPDGQRVASGSGDKTIKIW 994
Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 79/172 (45%), Gaps = 26/172 (15%)
Query: 8 LYGHSMDVRSLSVTPDG-CILSASRDKSAKLWKPNDLSPGAKVNTL-------------- 52
L GH V S++ +PDG + S S D + K+W D + G TL
Sbjct: 1089 LEGHGDSVWSVAFSPDGQRVASGSIDGTIKIW---DAASGTCTQTLEGHGGWVHSVAFSP 1145
Query: 53 -----LSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKL-H 105
S S D T K+W S C T+ H V V +G + +G +DKTIK+
Sbjct: 1146 DGQRVASGSIDGTIKIWDAASGTCTQTLEGHGGWVQSVAFSPDGQRVASGSSDKTIKIWD 1205
Query: 106 SEEGEFLKTLTGHTDCVRGLAVLNDTDFV-SCSNDASIRVWDSTTGKCVHTM 156
+ G +TL GH V+ +A D V S S+D +I++WD+ +G C T+
Sbjct: 1206 TASGTCTQTLEGHGGWVQSVAFSPDGQRVASGSSDNTIKIWDTASGTCTQTL 1257
>sp|P0CS42|LIS1_CRYNJ Nuclear distribution protein PAC1 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=PAC1 PE=3 SV=1
Length = 433
Score = 81.3 bits (199), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 99/215 (46%), Gaps = 45/215 (20%)
Query: 8 LYGHSMDVRSLSVTPDG-CILSASRDKSAKLWKPN----------------DLSPGAKVN 50
L+GH V S+ PDG ++SASRDK+ ++W+ + + P
Sbjct: 186 LHGHDHSVSSVRFMPDGETLVSASRDKTIRVWQVSSGYCIKTFSGHAEWVREAVPSEDGR 245
Query: 51 TLLSASWDMTAKLWCLESQQCKLTIRQHEMAV----------WGVIQLANGI-------- 92
L+SAS D T+++W + + K+ +R HE V + I+ G+
Sbjct: 246 WLVSASNDQTSRIWDFSTGETKMELRGHEHVVECAVFAPVNAYPAIRELAGLKPPAPRDT 305
Query: 93 --------IVTGCADKTIKL-HSEEGEFLKTLTGHTDCVRGLAVLNDTDFV-SCSNDASI 142
TG DKTIKL + G+ L+TL GH + +R L ++ S S+D +I
Sbjct: 306 RAKSPGVYAATGSRDKTIKLWDALSGQCLRTLVGHDNWIRALVFHPSGKYLLSASDDKTI 365
Query: 143 RVWDSTTGKCVHTMYGHPNFIYSVAAHGDLITSGG 177
+VWD G+C T+ H +F+ S+ + SGG
Sbjct: 366 KVWDLANGRCTKTIEAHSHFVTSMTWGRAVGASGG 400
Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 69/140 (49%), Gaps = 6/140 (4%)
Query: 52 LLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGV-IQLANGIIVTGCADKTIKLHSEEGE 110
L SAS D T KLW E+ + T++ H AV V G++ T +D T+KL +
Sbjct: 120 LASASEDATVKLWDWEAGDMERTLKGHTKAVMDVDFDPRGGLMATCSSDLTLKLWDTANQ 179
Query: 111 F--LKTLTGHTDCVRGLAVLNDTD-FVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSV- 166
+ +KTL GH V + + D + VS S D +IRVW ++G C+ T GH ++
Sbjct: 180 YTNVKTLHGHDHSVSSVRFMPDGETLVSASRDKTIRVWQVSSGYCIKTFSGHAEWVREAV 239
Query: 167 -AAHGDLITSGGEDQCVCVY 185
+ G + S DQ ++
Sbjct: 240 PSEDGRWLVSASNDQTSRIW 259
Score = 33.5 bits (75), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 45/100 (45%), Gaps = 7/100 (7%)
Query: 131 TDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSV--AAHGDLITSGGEDQCVCVYQNK 188
T S S DA++++WD G T+ GH + V G L+ + D + ++
Sbjct: 118 TLLASASEDATVKLWDWEAGDMERTLKGHTKAVMDVDFDPRGGLMATCSSDLTLKLWDTA 177
Query: 189 AQ----NSFMIPAMSVWAVAILPNSD-IVTGSSDGIVRVF 223
Q + SV +V +P+ + +V+ S D +RV+
Sbjct: 178 NQYTNVKTLHGHDHSVSSVRFMPDGETLVSASRDKTIRVW 217
>sp|P0CS43|LIS1_CRYNB Nuclear distribution protein PAC1 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=PAC1 PE=3 SV=1
Length = 433
Score = 81.3 bits (199), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 99/215 (46%), Gaps = 45/215 (20%)
Query: 8 LYGHSMDVRSLSVTPDG-CILSASRDKSAKLWKPN----------------DLSPGAKVN 50
L+GH V S+ PDG ++SASRDK+ ++W+ + + P
Sbjct: 186 LHGHDHSVSSVRFMPDGETLVSASRDKTIRVWQVSSGYCIKTFSGHAEWVREAVPSEDGR 245
Query: 51 TLLSASWDMTAKLWCLESQQCKLTIRQHEMAV----------WGVIQLANGI-------- 92
L+SAS D T+++W + + K+ +R HE V + I+ G+
Sbjct: 246 WLVSASNDQTSRIWDFSTGETKMELRGHEHVVECAVFAPVNAYPAIRELAGLKPPAPRDT 305
Query: 93 --------IVTGCADKTIKL-HSEEGEFLKTLTGHTDCVRGLAVLNDTDFV-SCSNDASI 142
TG DKTIKL + G+ L+TL GH + +R L ++ S S+D +I
Sbjct: 306 RAKSPGVYAATGSRDKTIKLWDALSGQCLRTLVGHDNWIRALVFHPSGKYLLSASDDKTI 365
Query: 143 RVWDSTTGKCVHTMYGHPNFIYSVAAHGDLITSGG 177
+VWD G+C T+ H +F+ S+ + SGG
Sbjct: 366 KVWDLANGRCTKTIEAHSHFVTSMTWGRAVGASGG 400
Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 69/140 (49%), Gaps = 6/140 (4%)
Query: 52 LLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGV-IQLANGIIVTGCADKTIKLHSEEGE 110
L SAS D T KLW E+ + T++ H AV V G++ T +D T+KL +
Sbjct: 120 LASASEDATVKLWDWEAGDMERTLKGHTKAVMDVDFDPRGGLMATCSSDLTLKLWDTANQ 179
Query: 111 F--LKTLTGHTDCVRGLAVLNDTD-FVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSV- 166
+ +KTL GH V + + D + VS S D +IRVW ++G C+ T GH ++
Sbjct: 180 YTNVKTLHGHDHSVSSVRFMPDGETLVSASRDKTIRVWQVSSGYCIKTFSGHAEWVREAV 239
Query: 167 -AAHGDLITSGGEDQCVCVY 185
+ G + S DQ ++
Sbjct: 240 PSEDGRWLVSASNDQTSRIW 259
Score = 33.5 bits (75), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 45/100 (45%), Gaps = 7/100 (7%)
Query: 131 TDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSV--AAHGDLITSGGEDQCVCVYQNK 188
T S S DA++++WD G T+ GH + V G L+ + D + ++
Sbjct: 118 TLLASASEDATVKLWDWEAGDMERTLKGHTKAVMDVDFDPRGGLMATCSSDLTLKLWDTA 177
Query: 189 AQ----NSFMIPAMSVWAVAILPNSD-IVTGSSDGIVRVF 223
Q + SV +V +P+ + +V+ S D +RV+
Sbjct: 178 NQYTNVKTLHGHDHSVSSVRFMPDGETLVSASRDKTIRVW 217
>sp|D3ZW91|POC1B_RAT POC1 centriolar protein homolog B OS=Rattus norvegicus GN=Poc1b
PE=2 SV=1
Length = 477
Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 112/251 (44%), Gaps = 36/251 (14%)
Query: 4 LSTALYGHSMDVRSLSVTPDGC--ILSASRDKSAKLWKPNDLSPGAKV------------ 49
L GH + S +P+ C I +AS D LW L P A+
Sbjct: 10 LERYFKGHKAAITSADFSPN-CKQIATASWDTFLMLWS---LKPHARAYRYVGHKDVVTS 65
Query: 50 -------NTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKT 101
N L SAS D T +LW L+ + + H V V A+G +VT DK+
Sbjct: 66 LQFSPQGNLLASASRDKTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQFLVTASEDKS 125
Query: 102 IKLHSE-EGEFLKTLTGHTDCVRGLAVLNDTDF-VSCSNDASIRVWDSTTGKCVHTM--- 156
IK+ S FL +L HT VR D VSCS D +I++WD+T+ +CV+
Sbjct: 126 IKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTSKQCVNNFSDS 185
Query: 157 YGHPNFIYSVAAHGDLITSGGEDQCVCVY---QNKAQNSFMIPAMSVWAVAILPNSD-IV 212
G NF+ + +G I S G D V ++ N+ + + + V ++ P+ + +V
Sbjct: 186 VGFANFV-DFSPNGTCIASAGSDHAVRIWDIRMNRLLQHYQVHSCGVNCLSFHPSGNSLV 244
Query: 213 TGSSDGIVRVF 223
T SSDG V++
Sbjct: 245 TASSDGTVKIL 255
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 91/206 (44%), Gaps = 26/206 (12%)
Query: 5 STALYGHSMDVRSLSVTPDGCIL-SASRDKSAKLW------------------KPNDLSP 45
S+ H+ VRS+ + DG L +AS DKS K+W + SP
Sbjct: 95 SSEFKAHTAPVRSVDFSADGQFLVTASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSP 154
Query: 46 GAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGI-IVTGCADKTIKL 104
++ ++S S D T K+W S+QC V NG I + +D +++
Sbjct: 155 DGRL--IVSCSEDKTIKIWDTTSKQCVNNFSDSVGFANFVDFSPNGTCIASAGSDHAVRI 212
Query: 105 HS-EEGEFLKTLTGHTDCVRGLAV-LNDTDFVSCSNDASIRVWDSTTGKCVHTMYGH--P 160
L+ H+ V L+ + V+ S+D ++++ D G+ ++T+ GH P
Sbjct: 213 WDIRMNRLLQHYQVHSCGVNCLSFHPSGNSLVTASSDGTVKILDLVEGRLIYTLQGHTGP 272
Query: 161 NFIYSVAAHGDLITSGGEDQCVCVYQ 186
F S + G+L TSGG D V V++
Sbjct: 273 VFTVSFSKDGELFTSGGADAQVLVWR 298
>sp|C4Q0P6|LIS1_SCHMA Lissencephaly-1 homolog OS=Schistosoma mansoni GN=Smp_129340 PE=3
SV=1
Length = 417
Score = 80.5 bits (197), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 103/220 (46%), Gaps = 35/220 (15%)
Query: 1 MYKLSTALYGHSMDVRSLSVTPDGCIL-SASRDKSAKLWKPN----------------DL 43
+Y+ L GH +V S++ P G L SASRDK+ K+W+ + +
Sbjct: 195 IYQCIKTLTGHDHNVSSVAFLPSGDFLVSASRDKTIKMWEVSTGYCTKTFIGHTEWIRSV 254
Query: 44 SPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVI-----QLANG------- 91
P + N L S S D T ++W +ES++C++ +R HE V + Q N
Sbjct: 255 RPSPEGNLLASCSNDHTIRIWSVESRECQVVLRGHEHVVECIAWASHPQNLNSLPSSMNS 314
Query: 92 --IIVTGCADKTIKLHSEE-GEFLKTLTGHTDCVRGLAVL-NDTDFVSCSNDASIRVWDS 147
++V+G D+TI+ G L L GH + VR L + +S S+D +IRVWD
Sbjct: 315 SLLLVSGSRDRTIRFWDVNIGICLFVLIGHDNWVRQLVFHPHGRLLLSASDDKTIRVWDL 374
Query: 148 TTGKCVHTMYGHPNFIYSVAAH--GDLITSGGEDQCVCVY 185
+C T+ H +F+ S+ + +G DQ + ++
Sbjct: 375 KNRRCHKTLNAHSHFVTSLDVNRLAPYAITGSVDQTIHIW 414
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 79/180 (43%), Gaps = 20/180 (11%)
Query: 8 LYGHSMDVRSLSVTPD-GCILSASRDKSAKLW----------------KPNDLSPGAKVN 50
L GH + + P +SAS D S K+W D++
Sbjct: 118 LTGHRSPITRVLFHPHYNVFVSASEDASIKVWDYETGEFEHTLKGHTDSVQDVAFDPSGK 177
Query: 51 TLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKL-HSEE 108
L S S DM KLW QC T+ H+ V V L +G +V+ DKTIK+
Sbjct: 178 FLASCSADMQVKLWDFTIYQCIKTLTGHDHNVSSVAFLPSGDFLVSASRDKTIKMWEVST 237
Query: 109 GEFLKTLTGHTDCVRGLAVLNDTDFV-SCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVA 167
G KT GHT+ +R + + + + SCSND +IR+W + +C + GH + + +A
Sbjct: 238 GYCTKTFIGHTEWIRSVRPSPEGNLLASCSNDHTIRIWSVESRECQVVLRGHEHVVECIA 297
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 80/165 (48%), Gaps = 14/165 (8%)
Query: 114 TLTGHTDCV-RGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVA--AHG 170
TLTGH + R L + FVS S DASI+VWD TG+ HT+ GH + + VA G
Sbjct: 117 TLTGHRSPITRVLFHPHYNVFVSASEDASIKVWDYETGEFEHTLKGHTDSVQDVAFDPSG 176
Query: 171 DLITSGGEDQCV-----CVYQNKAQNSFMIPAMSVWAVAILPNSD-IVTGSSDGIVRVFS 224
+ S D V +YQ + +V +VA LP+ D +V+ S D ++++
Sbjct: 177 KFLASCSADMQVKLWDFTIYQ--CIKTLTGHDHNVSSVAFLPSGDFLVSASRDKTIKMWE 234
Query: 225 ANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFS 269
+ + + + E ++ ++ + E + S+D +R++S
Sbjct: 235 VSTGYCTKTFI--GHTEWIRSVRPSPEGNLLA-SCSNDHTIRIWS 276
>sp|Q5RD06|POC1B_PONAB POC1 centriolar protein homolog B OS=Pongo abelii GN=POC1B PE=2
SV=1
Length = 451
Score = 80.5 bits (197), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 110/250 (44%), Gaps = 34/250 (13%)
Query: 4 LSTALYGHSMDVRSLSVTPDGCIL-SASRDKSAKLWKPNDLSPGAKV------------- 49
L GH + SL ++P+G L +AS D LW + P A+
Sbjct: 10 LERYFKGHKAAITSLDLSPNGKQLATASWDTFLMLW---NFKPHARAYRYVGHKDVVTSV 66
Query: 50 ------NTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTI 102
N L SAS D T +LW + + + H V V A+G + T DK+I
Sbjct: 67 QFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSI 126
Query: 103 KLHSE-EGEFLKTLTGHTDCVRGLAVLNDTDF-VSCSNDASIRVWDSTTGKCVHTM---Y 157
K+ S FL +L HT VR D VSCS D +I++WD+T +CV+
Sbjct: 127 KVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSV 186
Query: 158 GHPNFIYSVAAHGDLITSGGEDQCVCVYQ---NKAQNSFMIPAMSVWAVAILPNSD-IVT 213
G NF+ G I S G DQ V V+ NK + + + V ++ P+ + +VT
Sbjct: 187 GFANFV-DFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSDNYLVT 245
Query: 214 GSSDGIVRVF 223
SSDG +++
Sbjct: 246 ASSDGTLKIL 255
Score = 57.4 bits (137), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 92/201 (45%), Gaps = 26/201 (12%)
Query: 10 GHSMDVRSLSVTPDGCIL-SASRDKSAKLW------------------KPNDLSPGAKVN 50
H+ VRS+ + DG L +AS DKS K+W + SP ++
Sbjct: 100 AHTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRL- 158
Query: 51 TLLSASWDMTAKLWCLESQQCKLTIRQH-EMAVWGVIQLANGIIVTGCADKTIKL-HSEE 108
++S S D T K+W ++QC A + + I + +D+T+K+
Sbjct: 159 -IVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRV 217
Query: 109 GEFLKTLTGHTDCVRGLAVL-NDTDFVSCSNDASIRVWDSTTGKCVHTMYGH--PNFIYS 165
+ L+ H+ V ++ +D V+ S+D ++++ D G+ ++T+ GH P F S
Sbjct: 218 NKLLQHYQVHSGGVNCISFHPSDNYLVTASSDGTLKILDLLEGRLIYTLQGHTGPVFTVS 277
Query: 166 VAAHGDLITSGGEDQCVCVYQ 186
+ G+L SGG D V +++
Sbjct: 278 FSKGGELFASGGADTQVLLWR 298
>sp|B7PS00|LIS1_IXOSC Lissencephaly-1 homolog OS=Ixodes scapularis GN=IscW_ISCW007420
PE=3 SV=2
Length = 411
Score = 80.1 bits (196), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 105/232 (45%), Gaps = 45/232 (19%)
Query: 2 YKLSTALYGHSMDVRSLSVTPDG-CILSASRDKSAKLWKP------------NDLSPGAK 48
Y+ ++GH +V S+ P G ++S SRDKS K+W+ D +
Sbjct: 180 YECLRTMHGHDHNVSSVCFLPSGDHVVSCSRDKSIKMWEVATGYCVRTFTGHRDWVRMVR 239
Query: 49 VNT----LLSASWDMTAKLWCLESQQCKLTIRQH----EMAVW----------------- 83
VN+ L S S D T ++W + +++CKL +R+H E W
Sbjct: 240 VNSDGSLLASCSNDQTVRVWVVGTKECKLELREHDHVVECVAWAPAHAQLCGAAGDSNRR 299
Query: 84 ---GVIQLANGIIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDTDF-VSCSN 138
G Q +V+G DKTIK+ G L TL GH + VRG+ + +S S+
Sbjct: 300 PGAGGAQGTGPFLVSGSRDKTIKVWDVSTGLALFTLVGHDNWVRGVKFHPGGKYLLSASD 359
Query: 139 DASIRVWDSTTGKCVHTMYGHPNFIYSVAAH--GDLITSGGEDQCVCVYQNK 188
D ++RVW+ +C T+ H +F S+ H + +G DQ V V++ +
Sbjct: 360 DKTLRVWELAHQRCCKTLDAHSHFCTSLDFHRTAPYVVTGSVDQTVKVWECR 411
Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 94/196 (47%), Gaps = 23/196 (11%)
Query: 6 TALYGHSMDVRSLSVTP-DGCILSASRDKSAKLW--KPNDLSPGAKVNT----------- 51
+AL GH + + P ++SAS D S K+W + D K +T
Sbjct: 100 SALLGHRAPITRVLFHPVYSVVVSASEDASIKVWDYETGDFERTIKGHTDSVQDIAFDHT 159
Query: 52 ---LLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCA-DKTIKL-HS 106
L S S DMT KLW +S +C T+ H+ V V L +G V C+ DK+IK+
Sbjct: 160 GQFLASCSADMTIKLWDFKSYECLRTMHGHDHNVSSVCFLPSGDHVVSCSRDKSIKMWEV 219
Query: 107 EEGEFLKTLTGHTDCVRGLAVLNDTDFV-SCSNDASIRVWDSTTGKCVHTMYGHPNFIYS 165
G ++T TGH D VR + V +D + SCSND ++RVW T +C + H + +
Sbjct: 220 ATGYCVRTFTGHRDWVRMVRVNSDGSLLASCSNDQTVRVWVVGTKECKLELREHDHVVEC 279
Query: 166 VA---AHGDLITSGGE 178
VA AH L + G+
Sbjct: 280 VAWAPAHAQLCGAAGD 295
Score = 68.9 bits (167), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 74/141 (52%), Gaps = 5/141 (3%)
Query: 50 NTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGC-ADKTIKLHS-E 107
+ ++SAS D + K+W E+ + TI+ H +V + G + C AD TIKL +
Sbjct: 119 SVVVSASEDASIKVWDYETGDFERTIKGHTDSVQDIAFDHTGQFLASCSADMTIKLWDFK 178
Query: 108 EGEFLKTLTGHTDCVRGLAVLNDTD-FVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSV 166
E L+T+ GH V + L D VSCS D SI++W+ TG CV T GH +++ V
Sbjct: 179 SYECLRTMHGHDHNVSSVCFLPSGDHVVSCSRDKSIKMWEVATGYCVRTFTGHRDWVRMV 238
Query: 167 AAH--GDLITSGGEDQCVCVY 185
+ G L+ S DQ V V+
Sbjct: 239 RVNSDGSLLASCSNDQTVRVW 259
>sp|P46800|GBLP_DICDI Guanine nucleotide-binding protein subunit beta-like protein
OS=Dictyostelium discoideum GN=gpbB PE=1 SV=2
Length = 329
Score = 80.1 bits (196), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 120/250 (48%), Gaps = 33/250 (13%)
Query: 7 ALYGHSMDVRSLSVTPDG--CILSASRDKSAKLWK--PND-LSPGAKVNTL--------- 52
+L GH+ V S++V+P+ I+S+SRDK+ +W+ P D SPG +L
Sbjct: 16 SLVGHNGFVTSIAVSPENPDTIISSSRDKTVMVWQLTPTDATSPGKAHRSLKGHSHFVQD 75
Query: 53 ----------LSASWDMTAKLWCLESQQCKLTIRQHEMAVWGV-IQLANGIIVTGCADKT 101
LS SWD T +LW + + H V V N I++G D T
Sbjct: 76 VVISHDGQFALSGSWDNTLRLWDITKGVSTRLFKGHTQDVMSVAFSSDNRQIISGSRDAT 135
Query: 102 IKLHSEEGEFLKTLTG---HTDCVRGLAVLNDT-DFVSCSNDASIRVWDSTTGKCVHTMY 157
IK+ + GE TL G H D V + +T VS S D +++WD + KC HT+
Sbjct: 136 IKVWNTLGECKFTLEGPEAHQDWVSCIRFSPNTPTIVSGSWDNKVKIWDIKSFKCNHTLT 195
Query: 158 GHPNFIYSV--AAHGDLITSGGEDQCVCVYQ-NKAQNSFMIPAM-SVWAVAILPNSDIVT 213
H ++ +V + G L SGG+D C+++ + + + + A ++ A+A PN ++
Sbjct: 196 DHTGYVNTVTISPDGSLCASGGKDTFACLWELSSGKPLYKLEARNTINALAFSPNKYWLS 255
Query: 214 GSSDGIVRVF 223
++D + ++
Sbjct: 256 AATDDKIIIW 265
>sp|Q54KL5|WDR5_DICDI WD repeat-containing protein 5 homolog OS=Dictyostelium discoideum
GN=wdr5 PE=3 SV=1
Length = 335
Score = 80.1 bits (196), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 124/276 (44%), Gaps = 43/276 (15%)
Query: 2 YKLSTALYGHSMDVRSLSVTPDGCIL-SASRDKSAKLWKP----------------NDLS 44
Y L L GH + S+ +PDG L SAS DK+ K+W +D++
Sbjct: 36 YILKYTLKGHLKSISSVKFSPDGKWLASASADKTIKIWGAYDGKFERTLEGHKEGISDIA 95
Query: 45 PGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGV-IQLANGIIVTGCADKTIK 103
+ SAS D T K+W +ES + T++ H+ V+GV + +IV+G D+ ++
Sbjct: 96 WSQDSKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLIVSGSFDENVR 155
Query: 104 LHS-EEGEFLKTLTGHTDCVRGLAVLND-TDFVSCSNDASIRVWDSTTGKCVHTMY---G 158
+ GE K ++ H+D V G+ D T VS S D ++R+WD+TTG+ ++T+ G
Sbjct: 156 IWDVNTGECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQLLNTISTEDG 215
Query: 159 HPNFIYSVAAHGDLITSGGED------------QCVCVYQNKAQNSFMIPAMSVWAVAIL 206
+ +G + +G D +C+ Y + I + ++
Sbjct: 216 KEVSFVKFSPNGKFVLAGTLDNTLRLWSYNNNKKCLKTYTGHKNEKYCIFS----TFSVT 271
Query: 207 PNSDIVTGSSDGIVRVFSANPDRQAEDAVQAQYAEE 242
IVTGS D ++ ++ + Q + VQ E
Sbjct: 272 CGKWIVTGSEDNLIYIY----NLQTREIVQTLAGHE 303
Score = 75.9 bits (185), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 116/215 (53%), Gaps = 13/215 (6%)
Query: 72 KLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKL-HSEEGEFLKTLTGHTDCVRGLAVLN 129
K T++ H ++ V +G + + ADKTIK+ + +G+F +TL GH + + +A
Sbjct: 39 KYTLKGHLKSISSVKFSPDGKWLASASADKTIKIWGAYDGKFERTLEGHKEGISDIAWSQ 98
Query: 130 DTDFV-SCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAAH--GDLITSGGEDQCVCVYQ 186
D+ + S S+D +I++WD +GK V T+ GH +++ V+ + +LI SG D+ V ++
Sbjct: 99 DSKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLIVSGSFDENVRIWD 158
Query: 187 -NKAQNSFMIPAMSVWAVAILPNSD---IVTGSSDGIVRVFSANPDRQAEDAVQAQYAEE 242
N + + MI A S + N D +V+GS DG VR++ Q + + + +E
Sbjct: 159 VNTGECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTTG-QLLNTISTEDGKE 217
Query: 243 VKKLK-SANEQEIGGVKVSDDGIVRVFSANPDRQA 276
V +K S N + + + + D +R++S N +++
Sbjct: 218 VSFVKFSPNGKFV--LAGTLDNTLRLWSYNNNKKC 250
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 98/213 (46%), Gaps = 29/213 (13%)
Query: 3 KLSTALYGHSMDVRSLSVTP-DGCILSASRDKSAKLWKPN------------DLSPGAKV 49
K+ L GH V +S P I+S S D++ ++W N D G
Sbjct: 121 KMVKTLKGHKEYVFGVSFNPQSNLIVSGSFDENVRIWDVNTGECTKMISAHSDPVTGVHF 180
Query: 50 NT----LLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLA-NG-IIVTGCADKTIK 103
N ++S S+D T ++W + Q TI + ++ + NG ++ G D T++
Sbjct: 181 NRDGTLVVSGSYDGTVRIWDTTTGQLLNTISTEDGKEVSFVKFSPNGKFVLAGTLDNTLR 240
Query: 104 L--HSEEGEFLKTLTGHTD---CV-RGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMY 157
L ++ + LKT TGH + C+ +V V+ S D I +++ T + V T+
Sbjct: 241 LWSYNNNKKCLKTYTGHKNEKYCIFSTFSVTCGKWIVTGSEDNLIYIYNLQTREIVQTLA 300
Query: 158 GHPNFIYSVAAH--GDLITSGG--EDQCVCVYQ 186
GH + + +VA H ++I SG +D+ V +++
Sbjct: 301 GHEDVVLTVACHPTENIIASGALEKDRSVKIWK 333
>sp|Q8BHD1|POC1B_MOUSE POC1 centriolar protein homolog B OS=Mus musculus GN=Poc1b PE=1
SV=1
Length = 476
Score = 79.7 bits (195), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 111/251 (44%), Gaps = 36/251 (14%)
Query: 4 LSTALYGHSMDVRSLSVTPDGC--ILSASRDKSAKLWKPNDLSPGAKV------------ 49
L + GH + S +P+ C I +AS D LW L P A+
Sbjct: 10 LERSFKGHKAAITSADFSPN-CKQIATASWDTFLMLWS---LKPHARAYRYVGHKDVVTS 65
Query: 50 -------NTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKT 101
N L SAS D T +LW L+ + + H V V A+G ++VT DK+
Sbjct: 66 LQFSPQGNLLASASRDRTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQLLVTASEDKS 125
Query: 102 IKLHSE-EGEFLKTLTGHTDCVRGLAVLNDTDF-VSCSNDASIRVWDSTTGKCVHTM--- 156
IK+ S FL +L HT VR D VSCS D +I++WD+T +CV+
Sbjct: 126 IKVWSMFRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDS 185
Query: 157 YGHPNFIYSVAAHGDLITSGGEDQCVCVY---QNKAQNSFMIPAMSVWAVAILP-NSDIV 212
G NF+ +G I S G D V ++ NK + + + V ++ P + +V
Sbjct: 186 VGFANFV-DFNPNGTCIASAGSDHAVKIWDIRMNKLLQHYQVHSCGVNCLSFHPLGNSLV 244
Query: 213 TGSSDGIVRVF 223
T SSDG V++
Sbjct: 245 TASSDGTVKML 255
Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 96/207 (46%), Gaps = 28/207 (13%)
Query: 5 STALYGHSMDVRSLSVTPDGCIL-SASRDKSAKLW------------------KPNDLSP 45
S+ H+ VRS+ + DG +L +AS DKS K+W + SP
Sbjct: 95 SSEFKAHTAPVRSVDFSADGQLLVTASEDKSIKVWSMFRQRFLYSLYRHTHWVRCAKFSP 154
Query: 46 GAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGI-IVTGCADKTIKL 104
++ ++S S D T K+W ++QC V NG I + +D +K+
Sbjct: 155 DGRL--IVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPNGTCIASAGSDHAVKI 212
Query: 105 HS-EEGEFLKTLTGHTDCVRGLAV--LNDTDFVSCSNDASIRVWDSTTGKCVHTMYGH-- 159
+ L+ H+ V L+ L ++ V+ S+D ++++ D G+ ++T+ GH
Sbjct: 213 WDIRMNKLLQHYQVHSCGVNCLSFHPLGNS-LVTASSDGTVKMLDLIEGRLIYTLQGHTG 271
Query: 160 PNFIYSVAAHGDLITSGGEDQCVCVYQ 186
P F S + G+L+TSGG D V +++
Sbjct: 272 PVFTVSFSKDGELLTSGGADAQVLIWR 298
>sp|Q17N69|LIS1_AEDAE Lissencephaly-1 homolog OS=Aedes aegypti GN=AAEL000770 PE=3 SV=2
Length = 409
Score = 79.7 bits (195), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 104/232 (44%), Gaps = 48/232 (20%)
Query: 2 YKLSTALYGHSMDVRSLSVTPDG-CILSASRDKSAKLWKPNDLSPGAKVNT--------- 51
++ ++GH +V S+S P G +LSASRDK+ K+W +++ G V T
Sbjct: 181 FECVKTMHGHDHNVSSVSFVPAGDYLLSASRDKTIKMW---EVATGYCVKTFTGHREWVR 237
Query: 52 ----------LLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG---------- 91
+ S S D + ++W S++CK +R+HE V +
Sbjct: 238 MVRVNVDGSLMASCSNDHSVRVWQTNSKECKAELREHENTVECIAWAPESAAAAINEAAG 297
Query: 92 -----------IIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDTDF-VSCSN 138
+ +G DKTI++ G L TL GH + VRG+ + +S S+
Sbjct: 298 ADNKKGAHQGPFLASGSRDKTIRVWDVNSGLCLFTLVGHDNWVRGIVFHPGGKYMLSASD 357
Query: 139 DASIRVWDSTTGKCVHTMYGHPNFIYSVAAHGD--LITSGGEDQCVCVYQNK 188
D ++R+WD +C+ T+Y H +F S+ H + SG D V V++ +
Sbjct: 358 DKTLRIWDLRNKRCMKTLYAHSHFCTSLDMHKSHPYVISGSVDTTVKVWECR 409
Score = 63.5 bits (153), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 78/145 (53%), Gaps = 6/145 (4%)
Query: 52 LLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGC-ADKTIKLHSEEGE 110
+ SAS D T K+W E+ + + T++ H +V + ++G ++ C +D +IKL +
Sbjct: 121 MASASEDATIKIWDFETGEYERTLKGHTDSVQDLAFDSHGKLLASCSSDLSIKLWDFQQT 180
Query: 111 F--LKTLTGHTDCVRGLAVLNDTDF-VSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVA 167
F +KT+ GH V ++ + D+ +S S D +I++W+ TG CV T GH ++ V
Sbjct: 181 FECVKTMHGHDHNVSSVSFVPAGDYLLSASRDKTIKMWEVATGYCVKTFTGHREWVRMVR 240
Query: 168 AH--GDLITSGGEDQCVCVYQNKAQ 190
+ G L+ S D V V+Q ++
Sbjct: 241 VNVDGSLMASCSNDHSVRVWQTNSK 265
Score = 38.5 bits (88), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 53/100 (53%), Gaps = 11/100 (11%)
Query: 133 FVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVA--AHGDLITSGGEDQCVCVYQNKAQ 190
S S DA+I++WD TG+ T+ GH + + +A +HG L+ S D + ++ Q
Sbjct: 121 MASASEDATIKIWDFETGEYERTLKGHTDSVQDLAFDSHGKLLASCSSDLSIKLWD--FQ 178
Query: 191 NSF-MIPAM-----SVWAVAILPNSD-IVTGSSDGIVRVF 223
+F + M +V +V+ +P D +++ S D ++++
Sbjct: 179 QTFECVKTMHGHDHNVSSVSFVPAGDYLLSASRDKTIKMW 218
>sp|Q8TC44|POC1B_HUMAN POC1 centriolar protein homolog B OS=Homo sapiens GN=POC1B PE=1
SV=1
Length = 478
Score = 79.3 bits (194), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 110/250 (44%), Gaps = 34/250 (13%)
Query: 4 LSTALYGHSMDVRSLSVTPDGCIL-SASRDKSAKLWKPNDLSPGAKV------------- 49
L GH + SL ++P+G L +AS D LW + P A+
Sbjct: 10 LERYFKGHKAAITSLDLSPNGKQLATASWDTFLMLW---NFKPHARAYRYVGHKDVVTSV 66
Query: 50 ------NTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTI 102
N L SAS D T +LW + + + H V V A+G + T DK+I
Sbjct: 67 QFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSI 126
Query: 103 KLHSE-EGEFLKTLTGHTDCVRGLAVLNDTDF-VSCSNDASIRVWDSTTGKCVHTM---Y 157
K+ S FL +L HT VR D VSCS D +I++WD+T +CV+
Sbjct: 127 KVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSV 186
Query: 158 GHPNFIYSVAAHGDLITSGGEDQCVCVYQ---NKAQNSFMIPAMSVWAVAILPNSD-IVT 213
G NF+ G I S G DQ V V+ NK + + + V ++ P+ + ++T
Sbjct: 187 GFANFV-DFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGNYLIT 245
Query: 214 GSSDGIVRVF 223
SSDG +++
Sbjct: 246 ASSDGTLKIL 255
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 92/201 (45%), Gaps = 26/201 (12%)
Query: 10 GHSMDVRSLSVTPDGCIL-SASRDKSAKLW------------------KPNDLSPGAKVN 50
H+ VRS+ + DG L +AS DKS K+W + SP ++
Sbjct: 100 AHTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRL- 158
Query: 51 TLLSASWDMTAKLWCLESQQCKLTIRQH-EMAVWGVIQLANGIIVTGCADKTIKL-HSEE 108
++S S D T K+W ++QC A + + I + +D+T+K+
Sbjct: 159 -IVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRV 217
Query: 109 GEFLKTLTGHTDCVRGLAVLNDTDF-VSCSNDASIRVWDSTTGKCVHTMYGH--PNFIYS 165
+ L+ H+ V ++ ++ ++ S+D ++++ D G+ ++T+ GH P F S
Sbjct: 218 NKLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVS 277
Query: 166 VAAHGDLITSGGEDQCVCVYQ 186
+ G+L SGG D V +++
Sbjct: 278 FSKGGELFASGGADTQVLLWR 298
>sp|P83774|GBLP_CANAL Guanine nucleotide-binding protein subunit beta-like protein
OS=Candida albicans (strain SC5314 / ATCC MYA-2876)
GN=ASC1 PE=1 SV=2
Length = 317
Score = 79.3 bits (194), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 122/270 (45%), Gaps = 35/270 (12%)
Query: 4 LSTALYGHSMDVRSLSVTPD--GCILSASRDKSAKLWKPN-------------------- 41
L L GH+ V SL+ TP +LS SRDK+ WK
Sbjct: 9 LRGTLEGHNGWVTSLATTPAHPDLLLSGSRDKTLIKWKLTGGEDNQYGIPKKSFKGHSHI 68
Query: 42 --DLSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGI--IVTGC 97
D++ A LSASWD T +LW LE+ + H+ V V +A + IV+
Sbjct: 69 VQDVTISADGAYALSASWDRTLRLWDLETGETTQRFVGHKGDVLSV-SIAKNLRQIVSAS 127
Query: 98 ADKTIKLHSEEGEFLKTLTGHTDCVRGLAVL---NDTDFVSCSNDASIRVWDSTTGKCVH 154
DKT+K+ + GE + TLTGH D V + + + +S S D +++ WD
Sbjct: 128 RDKTVKVWNTIGECMATLTGHNDWVSAVRISPSDQSSTVISASWDKTVKSWDLADYSVNA 187
Query: 155 TMYGHPNFI--YSVAAHGDLITSGGEDQCVCVYQ-NKAQNSFMIPAMS-VWAVAILPNSD 210
GH +I +++ G L S G+D + ++ NK + + + A + V A+A PN
Sbjct: 188 DFIGHTGYISCITLSPDGSLCASAGKDGVIILWDLNKNKTLYTLEAKAEVHALAFSPNRY 247
Query: 211 IVTGSSDGIVRVFSANPDRQAEDAVQAQYA 240
+ ++ +++F +R D ++ ++A
Sbjct: 248 WLAAATTSGIKIFKLQ-ERSLLDELKPEFA 276
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.130 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 212,594,753
Number of Sequences: 539616
Number of extensions: 8982740
Number of successful extensions: 31420
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 491
Number of HSP's successfully gapped in prelim test: 654
Number of HSP's that attempted gapping in prelim test: 24904
Number of HSP's gapped (non-prelim): 3804
length of query: 557
length of database: 191,569,459
effective HSP length: 123
effective length of query: 434
effective length of database: 125,196,691
effective search space: 54335363894
effective search space used: 54335363894
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)