Query psy7057
Match_columns 557
No_of_seqs 789 out of 3881
Neff 8.8
Searched_HMMs 29240
Date Fri Aug 16 17:01:46 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7057.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/7057hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1vyh_C Platelet-activating fac 100.0 4.9E-38 1.7E-42 330.3 37.0 262 6-270 102-409 (410)
2 1got_B GT-beta; complex (GTP-b 100.0 2E-37 7E-42 317.0 39.1 265 2-269 45-340 (340)
3 3fm0_A Protein CIAO1; WDR39,SG 100.0 1.8E-37 6E-42 318.2 35.7 277 1-277 4-340 (345)
4 3ow8_A WD repeat-containing pr 100.0 1.9E-37 6.4E-42 315.1 35.3 264 4-270 24-319 (321)
5 2ynn_A Coatomer subunit beta'; 100.0 2.5E-37 8.7E-42 311.2 35.4 268 2-272 3-302 (304)
6 3frx_A Guanine nucleotide-bind 100.0 5.3E-37 1.8E-41 311.2 37.8 270 2-273 7-318 (319)
7 2xzm_R RACK1; ribosome, transl 100.0 2.4E-36 8.1E-41 309.3 38.5 270 2-273 11-341 (343)
8 4gqb_B Methylosome protein 50; 100.0 2.9E-37 1E-41 316.9 30.7 261 9-273 27-332 (344)
9 2hes_X YDR267CP; beta-propelle 100.0 1.6E-36 5.5E-41 309.1 34.6 271 1-272 3-328 (330)
10 2pbi_B Guanine nucleotide-bind 100.0 6.2E-36 2.1E-40 308.0 37.9 264 3-269 55-354 (354)
11 3iz6_a 40S ribosomal protein R 100.0 1.1E-36 3.6E-41 316.6 26.8 272 2-274 56-377 (380)
12 4g56_B MGC81050 protein; prote 100.0 4.1E-36 1.4E-40 309.8 30.2 263 8-274 38-345 (357)
13 4aow_A Guanine nucleotide-bind 100.0 1.2E-34 3.9E-39 293.8 38.7 272 2-274 28-339 (340)
14 4ery_A WD repeat-containing pr 100.0 2.4E-34 8.1E-39 289.6 36.7 268 1-271 12-311 (312)
15 1erj_A Transcriptional repress 100.0 3.5E-34 1.2E-38 299.0 37.4 260 10-272 62-389 (393)
16 3dm0_A Maltose-binding peripla 100.0 3.2E-34 1.1E-38 321.3 37.7 269 2-271 372-692 (694)
17 1nr0_A Actin interacting prote 100.0 9.9E-34 3.4E-38 312.8 37.0 267 4-272 51-522 (611)
18 2ymu_A WD-40 repeat protein; u 100.0 2.1E-33 7.3E-38 306.4 39.1 261 3-269 294-577 (577)
19 3ow8_A WD repeat-containing pr 100.0 1.8E-33 6.2E-38 285.6 34.6 222 4-225 72-319 (321)
20 1nr0_A Actin interacting prote 100.0 1.6E-33 5.5E-38 311.1 36.3 267 2-271 180-610 (611)
21 4gqb_B Methylosome protein 50; 100.0 8E-34 2.8E-38 291.3 31.2 220 10-229 80-333 (344)
22 1vyh_C Platelet-activating fac 100.0 1.5E-33 5.3E-38 296.0 33.2 223 4-226 142-410 (410)
23 3odt_A Protein DOA1; ubiquitin 100.0 3.1E-32 1.1E-36 272.3 36.0 269 1-278 7-302 (313)
24 3ei3_B DNA damage-binding prot 100.0 1.1E-32 3.7E-37 285.4 33.0 266 2-272 63-382 (383)
25 2ymu_A WD-40 repeat protein; u 100.0 7.4E-32 2.5E-36 294.2 40.0 263 3-271 253-538 (577)
26 3k26_A Polycomb protein EED; W 100.0 1.6E-33 5.5E-38 287.8 25.0 269 2-271 7-365 (366)
27 1gxr_A ESG1, transducin-like e 100.0 1.6E-31 5.3E-36 269.8 38.5 258 7-270 46-335 (337)
28 3zwl_B Eukaryotic translation 100.0 1.4E-31 4.8E-36 273.4 36.7 269 3-275 23-349 (369)
29 1sq9_A Antiviral protein SKI8; 100.0 9.2E-33 3.1E-37 286.5 27.6 270 3-273 7-396 (397)
30 1k8k_C P40, ARP2/3 complex 41 100.0 4.5E-32 1.5E-36 278.3 30.5 267 7-273 3-362 (372)
31 1got_B GT-beta; complex (GTP-b 100.0 2E-31 6.9E-36 272.4 34.8 221 3-224 88-340 (340)
32 2pm7_B Protein transport prote 100.0 6.6E-32 2.3E-36 270.7 29.6 223 5-227 2-285 (297)
33 3vl1_A 26S proteasome regulato 100.0 1.1E-31 3.7E-36 280.9 31.5 256 15-272 59-365 (420)
34 3i2n_A WD repeat-containing pr 100.0 9.7E-32 3.3E-36 273.9 30.0 269 4-273 10-354 (357)
35 4g56_B MGC81050 protein; prote 100.0 5.2E-32 1.8E-36 279.1 27.7 222 7-228 89-344 (357)
36 2ynn_A Coatomer subunit beta'; 100.0 3.1E-31 1.1E-35 266.7 32.3 229 43-274 19-261 (304)
37 3pst_A Protein DOA1; protein d 100.0 1.9E-35 6.6E-40 299.8 1.5 118 307-526 34-152 (425)
38 3gre_A Serine/threonine-protei 100.0 5.4E-32 1.8E-36 285.3 27.2 266 3-269 53-437 (437)
39 2hes_X YDR267CP; beta-propelle 100.0 3.4E-31 1.2E-35 269.7 31.1 226 2-227 46-328 (330)
40 3dwl_C Actin-related protein 2 100.0 1.4E-32 4.9E-37 283.5 19.6 263 7-270 6-377 (377)
41 2pbi_B Guanine nucleotide-bind 100.0 2E-30 6.8E-35 266.8 34.2 222 3-224 97-354 (354)
42 3bg1_A Protein SEC13 homolog; 100.0 4.1E-32 1.4E-36 274.7 20.8 221 6-226 7-292 (316)
43 1r5m_A SIR4-interacting protei 100.0 7.2E-31 2.5E-35 273.4 29.7 260 11-271 107-424 (425)
44 3fm0_A Protein CIAO1; WDR39,SG 100.0 1.3E-30 4.4E-35 267.1 31.0 224 8-231 57-339 (345)
45 4e54_B DNA damage-binding prot 100.0 5.4E-32 1.9E-36 286.2 21.0 271 2-275 109-433 (435)
46 3frx_A Guanine nucleotide-bind 100.0 4.7E-30 1.6E-34 260.0 34.1 221 4-227 57-317 (319)
47 2k89_A PLA2P, PLAP, phospholip 100.0 2.1E-34 7E-39 219.1 1.4 66 425-525 7-72 (80)
48 3iz6_a 40S ribosomal protein R 100.0 7E-31 2.4E-35 272.7 27.6 227 3-229 99-377 (380)
49 3v7d_B Cell division control p 100.0 1.1E-29 3.9E-34 269.7 36.8 264 2-270 152-461 (464)
50 1erj_A Transcriptional repress 100.0 9.1E-30 3.1E-34 265.5 34.8 213 14-227 125-389 (393)
51 1p22_A F-BOX/WD-repeat protein 100.0 2.2E-30 7.5E-35 273.6 30.0 258 9-275 130-417 (435)
52 4ery_A WD repeat-containing pr 100.0 8.5E-30 2.9E-34 256.2 32.2 224 3-226 56-311 (312)
53 2ovr_B FBW7, F-BOX/WD repeat p 100.0 1.1E-29 3.7E-34 268.8 34.5 262 3-274 109-393 (445)
54 4aez_A CDC20, WD repeat-contai 100.0 5.7E-30 2E-34 267.5 32.0 267 8-277 87-385 (401)
55 3mkq_A Coatomer beta'-subunit; 100.0 6.6E-30 2.3E-34 290.3 34.3 270 2-273 3-303 (814)
56 2ovr_B FBW7, F-BOX/WD repeat p 100.0 4.5E-29 1.5E-33 264.1 37.5 266 3-273 150-443 (445)
57 2xzm_R RACK1; ribosome, transl 100.0 7.4E-30 2.5E-34 261.0 29.8 221 4-227 68-340 (343)
58 1r5m_A SIR4-interacting protei 100.0 7.9E-30 2.7E-34 265.5 30.4 261 10-274 43-363 (425)
59 2pm9_A Protein WEB1, protein t 100.0 4.9E-31 1.7E-35 275.0 20.3 263 11-275 11-340 (416)
60 3v7d_B Cell division control p 100.0 3.2E-29 1.1E-33 266.2 34.3 263 4-275 113-424 (464)
61 2pm9_A Protein WEB1, protein t 100.0 7.1E-31 2.4E-35 273.8 19.6 263 10-273 65-415 (416)
62 2j04_B YDR362CP, TAU91; beta p 100.0 9.6E-31 3.3E-35 282.8 20.8 264 11-274 132-519 (524)
63 1gxr_A ESG1, transducin-like e 100.0 1.7E-29 5.9E-34 254.8 28.6 259 11-274 8-298 (337)
64 3vl1_A 26S proteasome regulato 100.0 4.4E-29 1.5E-33 261.0 31.1 259 13-272 98-419 (420)
65 3jrp_A Fusion protein of prote 100.0 4.1E-29 1.4E-33 256.3 30.2 244 3-273 2-288 (379)
66 4gga_A P55CDC, cell division c 100.0 1.8E-28 6.2E-33 257.8 35.5 258 14-276 107-399 (420)
67 4h5i_A Guanine nucleotide-exch 100.0 5.6E-29 1.9E-33 257.2 30.6 260 12-274 14-345 (365)
68 3sfz_A APAF-1, apoptotic pepti 100.0 5.3E-29 1.8E-33 296.2 34.4 221 6-226 609-912 (1249)
69 4aow_A Guanine nucleotide-bind 100.0 1.7E-28 5.8E-33 248.4 32.9 225 4-229 78-339 (340)
70 4a11_B DNA excision repair pro 100.0 1.5E-28 5E-33 254.8 33.1 269 5-277 36-370 (408)
71 3f3f_A Nucleoporin SEH1; struc 100.0 3.3E-29 1.1E-33 252.7 27.2 226 5-230 4-340 (351)
72 3odt_A Protein DOA1; ubiquitin 100.0 3.2E-28 1.1E-32 243.0 33.8 225 3-232 50-301 (313)
73 2pm7_B Protein transport prote 100.0 6.1E-29 2.1E-33 249.0 28.3 229 43-272 15-285 (297)
74 4ggc_A P55CDC, cell division c 100.0 4.8E-28 1.6E-32 242.6 34.4 253 15-272 28-315 (318)
75 1yfq_A Cell cycle arrest prote 100.0 1.2E-28 4E-33 249.9 28.7 259 3-269 2-321 (342)
76 3dw8_B Serine/threonine-protei 100.0 7.6E-29 2.6E-33 261.2 28.0 265 2-270 12-444 (447)
77 1k8k_C P40, ARP2/3 complex 41 100.0 2.5E-28 8.4E-33 250.3 28.5 226 2-228 42-362 (372)
78 1pgu_A Actin interacting prote 100.0 1E-27 3.6E-32 262.6 33.7 266 2-272 193-614 (615)
79 2oaj_A Protein SNI1; WD40 repe 100.0 1.4E-27 4.9E-32 274.5 35.8 215 7-224 12-309 (902)
80 3sfz_A APAF-1, apoptotic pepti 100.0 5.7E-29 2E-33 295.9 25.0 270 3-275 873-1210(1249)
81 1pgu_A Actin interacting prote 100.0 5.2E-28 1.8E-32 264.9 30.4 259 3-271 54-365 (615)
82 3dm0_A Maltose-binding peripla 100.0 7.6E-28 2.6E-32 269.6 32.0 222 4-226 422-692 (694)
83 3mmy_A MRNA export factor; mRN 100.0 2.8E-27 9.6E-32 241.3 31.3 263 2-270 29-344 (368)
84 2oaj_A Protein SNI1; WD40 repe 100.0 1.3E-27 4.4E-32 274.9 31.5 142 10-153 56-246 (902)
85 3k26_A Polycomb protein EED; W 100.0 2.3E-28 8E-33 249.4 22.6 215 11-226 68-365 (366)
86 3bg1_A Protein SEC13 homolog; 100.0 1.1E-28 3.9E-33 249.4 20.0 228 43-271 19-292 (316)
87 2aq5_A Coronin-1A; WD40 repeat 100.0 4.1E-28 1.4E-32 253.2 24.9 257 14-273 36-343 (402)
88 3dwl_C Actin-related protein 2 100.0 1.1E-28 3.7E-33 254.4 19.8 221 3-225 46-377 (377)
89 4gga_A P55CDC, cell division c 100.0 1.1E-26 3.8E-31 244.1 34.4 223 7-230 142-398 (420)
90 4aez_A CDC20, WD repeat-contai 100.0 6E-27 2.1E-31 244.5 32.1 224 5-231 126-384 (401)
91 1sq9_A Antiviral protein SKI8; 100.0 5.8E-28 2E-32 250.3 23.7 226 3-228 53-396 (397)
92 3zwl_B Eukaryotic translation 100.0 1.4E-26 4.9E-31 236.2 33.1 225 3-228 65-347 (369)
93 3vu4_A KMHSV2; beta-propeller 100.0 3.3E-27 1.1E-31 242.9 28.4 261 5-273 12-337 (355)
94 3i2n_A WD repeat-containing pr 100.0 2E-27 6.8E-32 241.9 26.1 221 9-229 62-355 (357)
95 3jro_A Fusion protein of prote 100.0 1E-27 3.4E-32 271.2 25.0 225 4-228 1-286 (753)
96 4a11_B DNA excision repair pro 100.0 6.2E-27 2.1E-31 242.5 27.3 258 9-271 96-404 (408)
97 4h5i_A Guanine nucleotide-exch 100.0 1.6E-27 5.5E-32 246.3 22.6 221 6-228 67-344 (365)
98 3l3f_X Protein DOA1, DOA1/UFD3 100.0 3.3E-30 1.1E-34 258.0 1.9 67 425-526 23-89 (362)
99 3gre_A Serine/threonine-protei 100.0 3.8E-27 1.3E-31 248.1 25.4 215 10-224 109-437 (437)
100 1p22_A F-BOX/WD-repeat protein 100.0 6.6E-27 2.2E-31 246.9 27.0 220 3-230 164-417 (435)
101 2xyi_A Probable histone-bindin 100.0 3.9E-27 1.3E-31 248.6 25.2 252 6-273 122-411 (430)
102 3mkq_A Coatomer beta'-subunit; 100.0 4.7E-26 1.6E-30 258.5 35.2 226 3-228 46-303 (814)
103 3f3f_A Nucleoporin SEH1; struc 100.0 1.4E-26 4.7E-31 233.4 25.8 231 43-274 17-339 (351)
104 4ggc_A P55CDC, cell division c 100.0 1.7E-25 5.9E-30 224.0 32.9 224 4-228 57-316 (318)
105 4e54_B DNA damage-binding prot 100.0 9.3E-28 3.2E-32 253.7 17.0 225 5-230 157-433 (435)
106 2j04_B YDR362CP, TAU91; beta p 99.9 5E-27 1.7E-31 253.7 22.2 219 51-272 175-428 (524)
107 3ei3_B DNA damage-binding prot 99.9 6.5E-26 2.2E-30 234.5 28.5 228 43-274 79-341 (383)
108 2vdu_B TRNA (guanine-N(7)-)-me 99.9 3.8E-26 1.3E-30 242.3 26.4 258 13-273 5-392 (450)
109 3lrv_A PRE-mRNA-splicing facto 99.9 4.2E-26 1.4E-30 232.9 25.8 242 21-272 45-333 (343)
110 2w18_A PALB2, fancn, partner a 99.9 7.6E-26 2.6E-30 227.0 27.0 217 1-225 75-355 (356)
111 2aq5_A Coronin-1A; WD40 repeat 99.9 3.8E-26 1.3E-30 238.2 23.5 232 43-274 40-301 (402)
112 3dw8_B Serine/threonine-protei 99.9 3.6E-25 1.2E-29 233.0 25.4 228 43-275 34-376 (447)
113 3jrp_A Fusion protein of prote 99.9 7.8E-25 2.7E-29 224.3 26.9 203 3-228 46-288 (379)
114 2j04_A TAU60, YPL007P, hypothe 99.9 1.6E-25 5.6E-30 238.3 21.7 252 9-270 12-295 (588)
115 4gq1_A NUP37; propeller, trans 99.9 1.5E-25 5.2E-30 233.7 20.8 218 48-269 100-386 (393)
116 1yfq_A Cell cycle arrest prote 99.9 2.6E-25 8.7E-30 225.3 21.9 227 43-273 17-283 (342)
117 3jro_A Fusion protein of prote 99.9 7.4E-25 2.5E-29 247.7 26.4 229 43-272 15-285 (753)
118 2j04_A TAU60, YPL007P, hypothe 99.9 3.7E-25 1.3E-29 235.5 21.3 208 7-226 47-296 (588)
119 3bws_A Protein LP49; two-domai 99.9 1.4E-23 4.6E-28 220.3 31.7 263 3-271 114-431 (433)
120 4gq1_A NUP37; propeller, trans 99.9 8.6E-25 2.9E-29 228.0 20.7 206 20-226 97-388 (393)
121 2vdu_B TRNA (guanine-N(7)-)-me 99.9 3.7E-24 1.3E-28 226.9 25.4 218 8-227 98-391 (450)
122 3mmy_A MRNA export factor; mRN 99.9 1.6E-23 5.5E-28 213.4 27.9 229 43-273 45-305 (368)
123 3lrv_A PRE-mRNA-splicing facto 99.9 3.7E-24 1.3E-28 218.5 22.8 224 44-273 43-293 (343)
124 1l0q_A Surface layer protein; 99.9 8.9E-23 3E-27 211.1 32.1 244 26-275 5-278 (391)
125 2xyi_A Probable histone-bindin 99.9 2.1E-23 7.3E-28 219.9 25.0 204 5-227 174-410 (430)
126 1l0q_A Surface layer protein; 99.9 1.4E-21 4.9E-26 202.0 35.6 224 3-231 23-279 (391)
127 2w18_A PALB2, fancn, partner a 99.9 4.3E-21 1.5E-25 192.6 28.5 168 98-270 155-355 (356)
128 3bws_A Protein LP49; two-domai 99.9 5.2E-21 1.8E-25 200.6 29.4 219 7-227 164-432 (433)
129 3vu4_A KMHSV2; beta-propeller 99.9 1.2E-21 4.1E-26 201.2 23.4 221 43-273 25-272 (355)
130 2k89_A PLA2P, PLAP, phospholip 99.9 2.1E-23 7.1E-28 158.7 6.8 70 359-428 4-73 (80)
131 1nir_A Nitrite reductase; hemo 99.9 1.6E-19 5.6E-24 196.0 31.0 270 3-274 170-516 (543)
132 2hqs_A Protein TOLB; TOLB, PAL 99.9 2.6E-19 8.9E-24 188.0 28.9 254 12-272 62-387 (415)
133 2hqs_A Protein TOLB; TOLB, PAL 99.8 3.6E-19 1.2E-23 186.9 23.6 241 6-252 111-409 (415)
134 2ecf_A Dipeptidyl peptidase IV 99.8 1.1E-17 3.7E-22 188.1 24.4 257 12-272 36-413 (741)
135 1ri6_A Putative isomerase YBHE 99.8 4.4E-17 1.5E-21 164.2 25.2 244 26-272 8-308 (343)
136 3u4y_A Uncharacterized protein 99.8 5.4E-17 1.9E-21 163.5 24.5 255 18-273 3-305 (331)
137 3vgz_A Uncharacterized protein 99.8 3.8E-16 1.3E-20 158.3 30.7 218 12-231 40-307 (353)
138 2ojh_A Uncharacterized protein 99.7 9.1E-17 3.1E-21 157.6 20.9 210 6-218 35-293 (297)
139 2ojh_A Uncharacterized protein 99.7 5.2E-17 1.8E-21 159.4 19.2 230 28-259 17-290 (297)
140 2z3z_A Dipeptidyl aminopeptida 99.7 3E-16 1E-20 175.4 26.8 256 13-274 82-437 (706)
141 1nir_A Nitrite reductase; hemo 99.7 3.3E-16 1.1E-20 170.0 25.4 226 45-273 145-403 (543)
142 2oit_A Nucleoporin 214KDA; NH2 99.7 4.1E-17 1.4E-21 172.3 16.5 151 78-228 91-279 (434)
143 1ri6_A Putative isomerase YBHE 99.7 8.9E-16 3E-20 154.6 24.2 215 10-226 35-307 (343)
144 2oit_A Nucleoporin 214KDA; NH2 99.7 1.7E-16 5.7E-21 167.6 18.7 178 11-190 35-279 (434)
145 1k32_A Tricorn protease; prote 99.7 3.7E-16 1.3E-20 182.7 22.7 257 6-271 197-501 (1045)
146 1xfd_A DIP, dipeptidyl aminope 99.7 8.1E-17 2.8E-21 180.3 15.7 255 14-273 18-394 (723)
147 1k32_A Tricorn protease; prote 99.7 2.3E-15 7.7E-20 176.1 27.3 252 11-274 294-639 (1045)
148 3o4h_A Acylamino-acid-releasin 99.7 8.1E-16 2.8E-20 168.1 21.8 245 12-271 21-314 (582)
149 1xfd_A DIP, dipeptidyl aminope 99.7 2.8E-15 9.5E-20 167.8 26.5 258 5-263 50-432 (723)
150 3l3f_X Protein DOA1, DOA1/UFD3 99.7 2.1E-17 7.1E-22 165.5 7.1 89 336-428 1-89 (362)
151 3hfq_A Uncharacterized protein 99.7 1.1E-14 3.8E-19 147.9 27.0 218 9-226 36-316 (347)
152 1pby_B Quinohemoprotein amine 99.7 2.5E-15 8.5E-20 150.9 21.8 239 26-274 4-312 (337)
153 3pst_A Protein DOA1; protein d 99.7 2.6E-17 9E-22 167.1 6.8 66 363-428 87-152 (425)
154 3u4y_A Uncharacterized protein 99.7 1.2E-14 4.1E-19 146.3 25.8 221 49-274 10-254 (331)
155 3vgz_A Uncharacterized protein 99.7 9.8E-15 3.4E-19 147.8 25.2 226 43-273 46-304 (353)
156 1pby_B Quinohemoprotein amine 99.7 1.3E-14 4.4E-19 145.6 24.8 223 3-231 22-314 (337)
157 1jmx_B Amine dehydrogenase; ox 99.7 4.6E-15 1.6E-19 149.8 21.4 209 17-230 4-328 (349)
158 2ecf_A Dipeptidyl peptidase IV 99.7 1.3E-15 4.5E-20 171.1 18.7 226 43-272 42-367 (741)
159 3hfq_A Uncharacterized protein 99.6 2.6E-14 9.1E-19 145.1 25.6 229 43-272 45-317 (347)
160 1q7f_A NHL, brain tumor CG1071 99.6 1.7E-13 5.8E-18 135.2 30.6 217 10-228 27-281 (286)
161 2z3z_A Dipeptidyl aminopeptida 99.6 2.4E-14 8.3E-19 159.9 24.1 223 6-229 114-437 (706)
162 3scy_A Hypothetical bacterial 99.6 9.1E-14 3.1E-18 142.0 25.1 213 11-226 48-336 (361)
163 3o4h_A Acylamino-acid-releasin 99.6 1.1E-14 3.8E-19 159.1 18.9 218 43-270 27-274 (582)
164 1z68_A Fibroblast activation p 99.6 6.5E-15 2.2E-19 165.0 14.1 248 17-272 20-391 (719)
165 1jmx_B Amine dehydrogenase; ox 99.6 1.7E-13 5.9E-18 138.2 22.5 220 44-273 6-326 (349)
166 3fvz_A Peptidyl-glycine alpha- 99.6 1.8E-12 6.1E-17 131.1 29.9 216 12-227 23-322 (329)
167 1z68_A Fibroblast activation p 99.6 1.6E-14 5.4E-19 161.8 14.9 267 6-274 50-445 (719)
168 3pe7_A Oligogalacturonate lyas 99.6 1.1E-13 3.8E-18 142.3 19.9 265 5-273 23-383 (388)
169 1jof_A Carboxy-CIS,CIS-muconat 99.5 1.3E-12 4.5E-17 134.0 26.7 217 11-228 38-342 (365)
170 3scy_A Hypothetical bacterial 99.5 2.1E-12 7.3E-17 131.7 26.4 228 43-272 55-337 (361)
171 1q7f_A NHL, brain tumor CG1071 99.5 1.1E-11 3.7E-16 122.1 27.2 226 43-273 35-281 (286)
172 1jof_A Carboxy-CIS,CIS-muconat 99.5 1.8E-12 6.1E-17 133.0 22.1 230 43-273 45-342 (365)
173 3azo_A Aminopeptidase; POP fam 99.5 8.5E-13 2.9E-17 146.2 19.2 260 8-271 19-366 (662)
174 3c5m_A Oligogalacturonate lyas 99.5 6.8E-13 2.3E-17 136.4 17.0 261 5-271 23-381 (396)
175 4a5s_A Dipeptidyl peptidase 4 99.5 2.3E-12 7.7E-17 145.1 22.4 217 12-231 16-357 (740)
176 3fvz_A Peptidyl-glycine alpha- 99.5 1.2E-11 4.1E-16 125.1 24.4 211 59-272 69-322 (329)
177 3pe7_A Oligogalacturonate lyas 99.4 6.1E-12 2.1E-16 129.2 20.3 222 5-227 73-382 (388)
178 2z2n_A Virginiamycin B lyase; 99.4 1.8E-09 6.3E-14 106.0 34.0 259 7-272 9-295 (299)
179 2dg1_A DRP35, lactonase; beta 99.4 2.8E-10 9.7E-15 114.4 28.5 212 5-217 37-300 (333)
180 4a5s_A Dipeptidyl peptidase 4 99.4 5.1E-12 1.7E-16 142.2 17.2 185 43-229 22-296 (740)
181 2bkl_A Prolyl endopeptidase; m 99.4 8.8E-12 3E-16 139.2 18.8 219 10-229 118-399 (695)
182 2gop_A Trilobed protease; beta 99.4 8.8E-11 3E-15 118.7 23.9 241 13-271 15-330 (347)
183 1rwi_B Serine/threonine-protei 99.4 7E-11 2.4E-15 114.9 21.6 214 14-229 25-266 (270)
184 2xdw_A Prolyl endopeptidase; a 99.3 1.9E-10 6.4E-15 128.7 27.1 218 11-229 123-416 (710)
185 3e5z_A Putative gluconolactona 99.3 2.5E-10 8.6E-15 113.0 24.5 220 6-230 21-289 (296)
186 3no2_A Uncharacterized protein 99.3 3.6E-10 1.2E-14 111.4 24.7 181 48-231 4-199 (276)
187 3dsm_A Uncharacterized protein 99.3 5.7E-10 2E-14 112.7 26.6 217 50-271 55-301 (328)
188 2dg1_A DRP35, lactonase; beta 99.3 1.5E-10 5.2E-15 116.4 22.2 214 13-227 6-263 (333)
189 2oiz_A Aromatic amine dehydrog 99.3 2.3E-10 8E-15 117.3 23.7 218 3-228 42-335 (361)
190 3c5m_A Oligogalacturonate lyas 99.3 1.5E-10 5E-15 118.8 20.9 208 17-226 85-381 (396)
191 2gop_A Trilobed protease; beta 99.3 1.8E-10 6.3E-15 116.3 21.3 202 13-226 59-330 (347)
192 3azo_A Aminopeptidase; POP fam 99.3 6.8E-11 2.3E-15 130.8 18.9 222 6-229 61-371 (662)
193 1rwi_B Serine/threonine-protei 99.3 2.5E-10 8.6E-15 110.9 18.9 230 43-275 29-267 (270)
194 3no2_A Uncharacterized protein 99.2 6.2E-10 2.1E-14 109.7 21.8 191 21-216 3-231 (276)
195 1yr2_A Prolyl oligopeptidase; 99.2 8.5E-10 2.9E-14 124.0 23.7 217 11-229 161-443 (741)
196 2z2n_A Virginiamycin B lyase; 99.2 2.4E-08 8.3E-13 97.8 30.5 216 10-228 54-296 (299)
197 1qks_A Cytochrome CD1 nitrite 99.2 5.1E-08 1.7E-12 105.7 35.5 270 3-273 188-539 (567)
198 2xdw_A Prolyl endopeptidase; a 99.2 2.7E-09 9.4E-14 119.3 26.4 229 43-274 130-416 (710)
199 2oiz_A Aromatic amine dehydrog 99.2 8.7E-10 3E-14 113.0 20.0 235 31-273 29-335 (361)
200 1pjx_A Dfpase, DIISOPROPYLFLUO 99.2 1.4E-08 4.6E-13 100.8 26.9 219 8-228 13-300 (314)
201 3e5z_A Putative gluconolactona 99.2 2.9E-09 9.8E-14 105.3 21.3 212 43-263 33-278 (296)
202 3hrp_A Uncharacterized protein 99.1 1.9E-08 6.4E-13 104.9 28.0 211 13-225 131-408 (409)
203 2qc5_A Streptogramin B lactona 99.1 7.5E-08 2.6E-12 94.4 30.2 216 9-226 16-259 (300)
204 3dsm_A Uncharacterized protein 99.1 1.2E-08 4E-13 103.0 24.1 212 13-231 44-305 (328)
205 1qks_A Cytochrome CD1 nitrite 99.1 6.1E-08 2.1E-12 105.1 29.0 222 49-273 167-422 (567)
206 3g4e_A Regucalcin; six bladed 99.1 9.5E-08 3.3E-12 94.7 27.6 211 2-215 2-260 (297)
207 2bkl_A Prolyl endopeptidase; m 99.0 6.5E-09 2.2E-13 116.0 19.8 225 43-273 126-398 (695)
208 1xip_A Nucleoporin NUP159; bet 99.0 1.9E-08 6.4E-13 103.4 19.7 167 81-255 39-228 (388)
209 3hxj_A Pyrrolo-quinoline quino 99.0 9.4E-09 3.2E-13 102.7 16.6 251 11-272 58-324 (330)
210 1pjx_A Dfpase, DIISOPROPYLFLUO 99.0 1.8E-07 6.2E-12 92.6 25.6 224 45-272 25-299 (314)
211 3iuj_A Prolyl endopeptidase; h 99.0 6.2E-08 2.1E-12 108.0 24.2 219 10-229 126-407 (693)
212 2qc5_A Streptogramin B lactona 99.0 5.8E-07 2E-11 87.9 28.4 213 10-225 59-298 (300)
213 3hrp_A Uncharacterized protein 98.9 1.3E-07 4.6E-12 98.4 24.1 225 43-270 136-408 (409)
214 1xip_A Nucleoporin NUP159; bet 98.9 1.8E-08 6.2E-13 103.5 17.0 127 78-212 87-228 (388)
215 2ghs_A AGR_C_1268P; regucalcin 98.9 3.9E-07 1.3E-11 91.7 26.4 198 14-215 50-290 (326)
216 3q7m_A Lipoprotein YFGL, BAMB; 98.9 3.3E-07 1.1E-11 93.7 25.7 240 22-269 102-375 (376)
217 1yr2_A Prolyl oligopeptidase; 98.9 1.2E-07 4.1E-12 106.5 22.8 228 43-273 168-442 (741)
218 3q7m_A Lipoprotein YFGL, BAMB; 98.9 4.6E-07 1.6E-11 92.7 24.6 246 23-275 53-340 (376)
219 2mad_H Methylamine dehydrogena 98.8 5.1E-06 1.7E-10 85.2 30.8 222 2-231 57-354 (373)
220 3sjl_D Methylamine dehydrogena 98.8 6E-07 2.1E-11 91.9 23.5 226 2-233 69-369 (386)
221 3hxj_A Pyrrolo-quinoline quino 98.8 1.7E-07 6E-12 93.4 18.8 201 23-228 107-325 (330)
222 2mad_H Methylamine dehydrogena 98.8 5.9E-06 2E-10 84.7 30.1 248 19-275 27-353 (373)
223 2hz6_A Endoplasmic reticulum t 98.7 1.3E-09 4.6E-14 112.0 0.7 177 48-230 8-195 (369)
224 3g4e_A Regucalcin; six bladed 98.7 1.5E-06 5E-11 86.0 21.1 157 11-169 52-249 (297)
225 3dr2_A Exported gluconolactona 98.7 9.2E-07 3.2E-11 87.8 19.6 209 7-221 39-301 (305)
226 3sjl_D Methylamine dehydrogena 98.6 5.2E-06 1.8E-10 85.0 23.3 250 18-275 38-366 (386)
227 2qe8_A Uncharacterized protein 98.6 2.8E-06 9.5E-11 85.9 18.9 214 2-218 9-312 (343)
228 1kb0_A Quinohemoprotein alcoho 98.5 4.2E-06 1.4E-10 92.8 21.5 169 23-191 77-348 (677)
229 1yiq_A Quinohemoprotein alcoho 98.5 3.8E-06 1.3E-10 93.3 21.1 170 23-192 70-341 (689)
230 3dr2_A Exported gluconolactona 98.5 2.9E-06 1E-10 84.1 17.6 179 45-228 52-268 (305)
231 2hz6_A Endoplasmic reticulum t 98.5 4.7E-08 1.6E-12 100.3 3.5 179 90-275 9-195 (369)
232 3iuj_A Prolyl endopeptidase; h 98.5 4.8E-06 1.7E-10 92.6 19.4 224 43-273 134-406 (693)
233 3c75_H MADH, methylamine dehyd 98.4 3E-05 1E-09 80.6 23.7 224 2-231 109-406 (426)
234 4a2l_A BT_4663, two-component 98.4 0.00016 5.3E-09 81.7 31.1 215 12-229 214-482 (795)
235 2ghs_A AGR_C_1268P; regucalcin 98.4 3E-05 1E-09 77.7 22.3 161 12-177 89-290 (326)
236 4a2l_A BT_4663, two-component 98.4 0.00028 9.6E-09 79.6 32.2 215 12-230 309-574 (795)
237 3c75_H MADH, methylamine dehyd 98.4 7E-05 2.4E-09 77.8 24.6 110 47-158 82-218 (426)
238 2iwa_A Glutamine cyclotransfer 98.2 0.00031 1.1E-08 68.0 23.9 201 2-228 9-238 (266)
239 2qe8_A Uncharacterized protein 98.2 4.2E-05 1.4E-09 77.2 18.6 183 43-226 22-277 (343)
240 1yiq_A Quinohemoprotein alcoho 98.2 0.00028 9.4E-09 78.3 26.4 134 23-156 121-345 (689)
241 1kb0_A Quinohemoprotein alcoho 98.2 0.00011 3.8E-09 81.3 22.4 210 23-232 128-512 (677)
242 3v9f_A Two-component system se 98.2 0.00076 2.6E-08 75.8 29.6 255 13-273 163-479 (781)
243 3v9f_A Two-component system se 98.2 0.00099 3.4E-08 74.9 30.5 257 12-272 257-568 (781)
244 2iwa_A Glutamine cyclotransfer 98.1 0.0011 3.8E-08 64.0 25.1 202 70-273 10-238 (266)
245 1mda_H Methylamine dehydrogena 98.1 0.0001 3.4E-09 75.2 18.5 207 60-275 47-349 (368)
246 1mda_H Methylamine dehydrogena 98.1 4.8E-05 1.6E-09 77.6 14.4 217 2-231 56-350 (368)
247 2ece_A 462AA long hypothetical 98.0 0.00054 1.9E-08 70.8 22.2 181 47-227 93-352 (462)
248 1npe_A Nidogen, entactin; glyc 98.0 0.0013 4.5E-08 63.3 24.0 195 14-209 37-262 (267)
249 1kv9_A Type II quinohemoprotei 98.0 0.0003 1E-08 77.8 20.0 170 23-192 66-336 (668)
250 3nok_A Glutaminyl cyclase; bet 98.0 0.00088 3E-08 64.3 20.6 186 71-259 45-253 (268)
251 3nol_A Glutamine cyclotransfer 98.0 0.0014 4.8E-08 62.9 21.7 165 49-215 53-243 (262)
252 2fp8_A Strictosidine synthase; 97.9 0.002 6.8E-08 63.9 23.9 186 81-271 81-312 (322)
253 2fp8_A Strictosidine synthase; 97.9 0.0012 4.2E-08 65.4 22.3 212 13-227 19-313 (322)
254 1npe_A Nidogen, entactin; glyc 97.9 0.0039 1.3E-07 59.9 25.1 186 43-230 41-241 (267)
255 3nol_A Glutamine cyclotransfer 97.9 0.0014 4.8E-08 62.9 20.7 185 71-259 33-243 (262)
256 2ad6_A Methanol dehydrogenase 97.9 0.0016 5.4E-08 70.5 23.2 168 23-190 62-336 (571)
257 3mbr_X Glutamine cyclotransfer 97.9 0.0083 2.8E-07 56.9 25.2 155 59-215 43-222 (243)
258 2ece_A 462AA long hypothetical 97.8 0.0017 5.7E-08 67.2 21.6 193 22-215 93-399 (462)
259 3mbr_X Glutamine cyclotransfer 97.8 0.0053 1.8E-07 58.3 23.1 187 70-259 10-222 (243)
260 3nok_A Glutaminyl cyclase; bet 97.8 0.0026 8.7E-08 61.1 19.7 165 49-215 65-253 (268)
261 1kv9_A Type II quinohemoprotei 97.7 0.0028 9.6E-08 69.9 22.1 135 23-157 117-341 (668)
262 2p4o_A Hypothetical protein; p 97.7 0.025 8.6E-07 55.4 27.0 211 3-217 23-278 (306)
263 1w6s_A Methanol dehydrogenase 97.6 0.0033 1.1E-07 68.2 21.3 139 52-190 124-343 (599)
264 2xbg_A YCF48-like protein; pho 97.6 0.062 2.1E-06 53.3 31.9 251 12-269 35-319 (327)
265 1flg_A Protein (quinoprotein e 97.5 0.016 5.6E-07 62.6 23.8 168 23-190 68-356 (582)
266 2ad6_A Methanol dehydrogenase 97.4 0.022 7.6E-07 61.4 24.0 134 23-157 115-343 (571)
267 1ijq_A LDL receptor, low-densi 97.4 0.13 4.4E-06 50.7 27.8 212 58-272 9-238 (316)
268 3qqz_A Putative uncharacterize 97.3 0.11 3.6E-06 49.8 25.0 194 7-225 21-251 (255)
269 1k3i_A Galactose oxidase precu 97.3 0.0067 2.3E-07 66.7 17.7 213 17-229 190-499 (656)
270 2ism_A Putative oxidoreductase 97.2 0.028 9.7E-07 56.5 20.3 200 13-215 31-332 (352)
271 3v64_C Agrin; beta propeller, 97.2 0.12 4E-06 51.9 24.6 174 14-187 74-273 (349)
272 3v65_B Low-density lipoprotein 97.2 0.13 4.3E-06 52.4 25.1 210 17-228 81-319 (386)
273 2p4o_A Hypothetical protein; p 97.1 0.17 5.7E-06 49.4 25.1 181 43-226 37-241 (306)
274 3v65_B Low-density lipoprotein 97.1 0.068 2.3E-06 54.5 22.6 175 13-187 116-316 (386)
275 3tc9_A Hypothetical hydrolase; 97.1 0.05 1.7E-06 56.4 21.2 212 14-226 138-429 (430)
276 2xe4_A Oligopeptidase B; hydro 97.0 0.028 9.6E-07 62.8 20.1 174 14-187 175-398 (751)
277 3v64_C Agrin; beta propeller, 97.0 0.26 9E-06 49.3 25.6 212 14-228 35-276 (349)
278 3p5b_L Low density lipoprotein 97.0 0.39 1.3E-05 49.0 28.2 177 51-229 85-279 (400)
279 1fwx_A Nitrous oxide reductase 97.0 0.02 7E-07 61.2 17.3 177 49-227 101-361 (595)
280 2xbg_A YCF48-like protein; pho 97.0 0.056 1.9E-06 53.7 19.7 173 11-186 120-319 (327)
281 1flg_A Protein (quinoprotein e 96.9 0.1 3.5E-06 56.3 22.9 135 23-158 117-364 (582)
282 3p5b_L Low density lipoprotein 96.9 0.41 1.4E-05 48.8 26.5 177 12-188 111-319 (400)
283 3tc9_A Hypothetical hydrolase; 96.8 0.17 5.9E-06 52.3 22.9 143 43-187 142-299 (430)
284 1ijq_A LDL receptor, low-densi 96.8 0.49 1.7E-05 46.4 28.1 179 49-229 41-240 (316)
285 3sov_A LRP-6, low-density lipo 96.7 0.26 8.7E-06 48.7 22.2 177 14-190 36-239 (318)
286 3ott_A Two-component system se 96.7 1.1 3.8E-05 49.6 29.7 205 13-224 63-304 (758)
287 1fwx_A Nitrous oxide reductase 96.7 0.03 1E-06 59.9 15.5 158 2-161 122-383 (595)
288 3ott_A Two-component system se 96.6 0.74 2.5E-05 51.1 27.8 208 12-228 21-261 (758)
289 4hw6_A Hypothetical protein, I 96.6 0.24 8.4E-06 51.2 22.2 211 14-226 140-432 (433)
290 4hw6_A Hypothetical protein, I 96.5 0.41 1.4E-05 49.4 22.9 181 43-225 144-372 (433)
291 1w6s_A Methanol dehydrogenase 96.5 0.11 3.9E-06 56.1 19.1 181 49-231 62-346 (599)
292 3m0c_C LDL receptor, low-densi 96.5 1.1 3.6E-05 50.1 27.4 174 56-230 401-592 (791)
293 3a9g_A Putative uncharacterize 96.4 0.46 1.6E-05 47.6 21.8 202 13-215 29-329 (354)
294 1k3i_A Galactose oxidase precu 96.4 0.036 1.2E-06 60.8 14.5 202 14-216 244-530 (656)
295 3m0c_C LDL receptor, low-densi 96.2 1.1 3.7E-05 50.1 25.5 177 12-188 423-631 (791)
296 2xe4_A Oligopeptidase B; hydro 96.2 0.15 5.1E-06 56.9 18.6 178 43-224 179-395 (751)
297 3amr_A 3-phytase; beta-propell 96.2 0.93 3.2E-05 45.1 22.2 176 47-226 38-262 (355)
298 2p9w_A MAL S 1 allergenic prot 96.2 0.7 2.4E-05 45.6 21.1 153 75-227 8-215 (334)
299 2g8s_A Glucose/sorbosone dehyd 96.1 0.78 2.7E-05 45.8 22.0 211 13-225 18-350 (353)
300 3qqz_A Putative uncharacterize 96.1 0.97 3.3E-05 43.0 22.8 155 74-228 21-205 (255)
301 3sov_A LRP-6, low-density lipo 96.0 1.3 4.4E-05 43.6 24.3 211 58-273 12-239 (318)
302 4a0p_A LRP6, LRP-6, low-densit 95.9 2.1 7.1E-05 46.5 25.3 174 13-187 37-235 (628)
303 2p9w_A MAL S 1 allergenic prot 95.7 1.8 6.3E-05 42.6 21.7 141 49-190 24-216 (334)
304 3ei3_A DNA damage-binding prot 95.5 3.5 0.00012 48.1 26.7 212 59-272 807-1062(1158)
305 3kya_A Putative phosphatase; s 95.3 2.8 9.6E-05 43.9 22.5 214 15-229 141-477 (496)
306 3kya_A Putative phosphatase; s 95.0 4.1 0.00014 42.6 23.2 233 43-277 144-480 (496)
307 4a0p_A LRP6, LRP-6, low-densit 94.8 5.4 0.00018 43.2 26.2 182 45-228 44-238 (628)
308 3amr_A 3-phytase; beta-propell 94.2 4.1 0.00014 40.5 19.6 176 92-271 42-262 (355)
309 3sre_A PON1, serum paraoxonase 94.2 2.5 8.6E-05 42.2 18.3 147 81-227 51-252 (355)
310 3s94_A LRP-6, low-density lipo 94.0 7.6 0.00026 41.9 23.1 184 45-228 47-244 (619)
311 3ei3_A DNA damage-binding prot 94.0 12 0.00041 43.6 32.8 251 16-272 330-636 (1158)
312 2be1_A Serine/threonine-protei 93.7 0.1 3.5E-06 52.0 6.9 181 49-230 10-234 (339)
313 3das_A Putative oxidoreductase 93.6 6.4 0.00022 39.1 23.4 206 8-214 27-324 (347)
314 1n7d_A LDL receptor, low-densi 93.5 0.064 2.2E-06 59.3 5.5 171 57-228 384-572 (699)
315 1n7d_A LDL receptor, low-densi 93.3 0.076 2.6E-06 58.7 5.7 176 14-190 407-615 (699)
316 2xzh_A Clathrin heavy chain 1; 93.0 7.5 0.00026 38.2 26.8 240 32-278 48-338 (365)
317 3s94_A LRP-6, low-density lipo 92.9 12 0.00041 40.3 24.3 174 56-229 15-204 (619)
318 1tl2_A L10, protein (tachylect 92.6 2.4 8.1E-05 39.3 13.6 125 13-142 41-203 (236)
319 1bpo_A Protein (clathrin); cla 91.9 12 0.00043 38.2 26.5 239 33-278 48-337 (494)
320 2xn4_A Kelch-like protein 2; s 91.4 6.5 0.00022 37.5 16.5 166 60-229 31-231 (302)
321 3sre_A PON1, serum paraoxonase 91.3 13 0.00043 37.1 19.6 132 15-148 52-251 (355)
322 3ii7_A Kelch-like protein 7; p 91.1 10 0.00035 36.2 17.6 166 59-228 24-226 (306)
323 2vpj_A Kelch-like protein 12; 91.1 7.4 0.00025 37.0 16.5 166 60-229 32-233 (301)
324 3pbp_A Nucleoporin NUP82; beta 90.0 18 0.00063 36.8 19.3 125 99-223 40-208 (452)
325 1xi4_A Clathrin heavy chain; a 90.0 16 0.00056 43.0 19.9 239 32-277 47-336 (1630)
326 2xn4_A Kelch-like protein 2; s 89.9 5.3 0.00018 38.2 14.3 177 49-228 62-277 (302)
327 2xzh_A Clathrin heavy chain 1; 89.7 17 0.00057 35.8 27.1 212 20-233 74-338 (365)
328 2ism_A Putative oxidoreductase 89.3 18 0.00061 35.7 18.1 71 79-150 30-115 (352)
329 3ii7_A Kelch-like protein 7; p 89.2 12 0.0004 35.7 16.2 199 26-228 15-273 (306)
330 1bpo_A Protein (clathrin); cla 89.0 22 0.00076 36.4 25.9 211 20-232 73-336 (494)
331 2vpj_A Kelch-like protein 12; 89.0 6.2 0.00021 37.6 13.9 176 49-228 63-279 (301)
332 4asc_A Kelch repeat and BTB do 87.7 13 0.00046 35.6 15.5 128 61-190 69-222 (315)
333 3qhy_B Beta-lactamase inhibito 87.7 15 0.00051 35.0 15.6 180 80-273 63-247 (282)
334 3a9g_A Putative uncharacterize 86.8 25 0.00087 34.6 19.3 73 78-150 27-115 (354)
335 1cru_A Protein (soluble quinop 86.7 18 0.0006 37.3 16.5 29 13-41 27-56 (454)
336 3pbp_A Nucleoporin NUP82; beta 85.8 22 0.00074 36.3 15.8 88 139-227 40-158 (452)
337 4asc_A Kelch repeat and BTB do 85.5 26 0.00088 33.5 19.3 173 52-228 8-222 (315)
338 1xi4_A Clathrin heavy chain; a 85.5 22 0.00075 42.0 17.4 210 20-231 73-335 (1630)
339 1zgk_A Kelch-like ECH-associat 85.4 26 0.00089 33.4 16.5 98 130-229 121-242 (308)
340 1tl2_A L10, protein (tachylect 85.1 6.3 0.00022 36.5 10.5 98 120-222 41-158 (236)
341 2be1_A Serine/threonine-protei 84.2 5.7 0.0002 39.3 10.6 104 90-193 10-134 (339)
342 2g8s_A Glucose/sorbosone dehyd 79.3 50 0.0017 32.4 17.1 51 80-130 18-76 (353)
343 2uvk_A YJHT; unknown function, 78.9 8 0.00027 37.9 9.7 53 181-233 286-348 (357)
344 1zgk_A Kelch-like ECH-associat 78.1 19 0.00064 34.4 12.0 129 59-190 90-241 (308)
345 3qhy_B Beta-lactamase inhibito 76.7 52 0.0018 31.2 18.5 204 14-230 25-249 (282)
346 2woz_A Kelch repeat and BTB do 74.8 59 0.002 30.9 15.4 128 61-190 80-232 (318)
347 3b7f_A Glycosyl hydrolase, BNR 71.6 81 0.0028 31.1 19.1 172 49-224 22-259 (394)
348 3no0_A DNA gyrase subunit A; D 69.0 79 0.0027 29.9 14.9 137 48-187 79-244 (276)
349 2woz_A Kelch repeat and BTB do 66.7 88 0.003 29.6 18.3 168 60-229 25-233 (318)
350 2uvk_A YJHT; unknown function, 64.8 91 0.0031 30.0 13.7 48 140-187 168-224 (357)
351 3uc1_A DNA gyrase subunit A; D 61.3 1.2E+02 0.0042 29.4 17.3 138 48-186 108-276 (327)
352 2zux_A YESW protein; beta-prop 58.9 1.8E+02 0.0062 30.6 21.9 104 60-168 293-419 (591)
353 4gq2_M Nucleoporin NUP120; bet 57.3 67 0.0023 36.4 12.3 37 121-157 237-274 (950)
354 3das_A Putative oxidoreductase 53.3 1.7E+02 0.0059 28.6 18.9 76 73-148 25-115 (347)
355 2zwa_A Leucine carboxyl methyl 50.5 1.3E+02 0.0044 32.6 12.8 130 60-190 469-636 (695)
356 3fbl_A Putative uncharacterize 48.6 19 0.00066 25.3 3.6 27 496-522 55-81 (82)
357 3b7f_A Glycosyl hydrolase, BNR 44.4 2.3E+02 0.008 27.6 17.9 133 90-223 22-204 (394)
358 4gq2_M Nucleoporin NUP120; bet 43.7 44 0.0015 37.9 7.9 29 48-76 246-274 (950)
359 1cru_A Protein (soluble quinop 41.6 2.9E+02 0.01 27.9 21.4 52 79-130 26-87 (454)
360 1zi0_A DNA gyrase subunit A; b 41.1 2.4E+02 0.0083 26.8 18.8 137 49-187 109-275 (307)
361 2agh_C Zinc finger protein HRX 40.5 26 0.0009 20.3 2.7 18 505-526 5-22 (31)
362 3sbq_A Nitrous-oxide reductase 39.0 95 0.0032 32.9 8.7 99 79-178 322-454 (638)
363 4fhn_B Nucleoporin NUP120; pro 37.5 53 0.0018 38.1 7.5 30 47-76 247-276 (1139)
364 4fhn_B Nucleoporin NUP120; pro 37.4 63 0.0022 37.4 8.1 36 122-157 240-276 (1139)
365 1suu_A DNA gyrase subunit A; t 33.2 3.2E+02 0.011 26.0 19.7 98 49-148 114-230 (312)
366 3f7f_A Nucleoporin NUP120; nuc 31.7 78 0.0027 34.5 7.0 66 122-188 224-304 (729)
367 2zwa_A Leucine carboxyl methyl 30.8 3.3E+02 0.011 29.3 12.1 141 89-229 397-579 (695)
368 2xpn_B SPT6, chromatin structu 28.1 17 0.00057 20.4 0.5 10 430-439 11-20 (26)
369 2hzs_I RNA polymerase II media 25.5 13 0.00043 20.7 -0.3 9 544-552 17-25 (27)
370 2wg3_C Hedgehog-interacting pr 24.3 5.7E+02 0.019 25.9 24.0 29 13-41 14-44 (463)
371 2vjv_A Transposase ORFA; DNA-b 22.2 24 0.00082 30.4 0.7 36 510-548 123-158 (159)
372 1gvp_A Gene V protein; DNA-bin 21.5 58 0.002 24.9 2.6 22 428-449 35-56 (87)
373 3s25_A Hypothetical 7-bladed b 20.3 5.4E+02 0.018 24.2 15.7 156 59-227 88-255 (302)
374 1t95_A Hypothetical protein AF 20.1 55 0.0019 30.3 2.7 38 485-523 70-117 (240)
No 1
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=4.9e-38 Score=330.30 Aligned_cols=262 Identities=28% Similarity=0.385 Sum_probs=237.2
Q ss_pred EEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC----------------CCCCCCCCEEEEEECCCeEEEEECCC
Q psy7057 6 TALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND----------------LSPGAKVNTLLSASWDMTAKLWCLES 68 (557)
Q Consensus 6 ~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~Dg~i~iwd~~~ 68 (557)
..|.+|.++|++++|+|++. |++|+.||+|++||+.+ +++++++.+|++|+.|++|++||+.+
T Consensus 102 ~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~ 181 (410)
T 1vyh_C 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQG 181 (410)
T ss_dssp CEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTS
T ss_pred EeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCC
Confidence 46789999999999999998 89999999999999876 56778899999999999999999999
Q ss_pred CeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeCCCe-EEEEECCCeEEEE
Q psy7057 69 QQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDTD-FVSCSNDASIRVW 145 (557)
Q Consensus 69 ~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~~~~-lvs~s~Dg~I~vw 145 (557)
++++.++.+|...|.+++|+|++ .|++|+.|++|++|| .++.++..+.+|...|.++.++|++. +++|+.|++|++|
T Consensus 182 ~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vw 261 (410)
T 1vyh_C 182 FECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261 (410)
T ss_dssp SCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred CceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEE
Confidence 99999999999999999999988 999999999999999 57788999999999999999999977 6799999999999
Q ss_pred ECCCCeEEEEEeCCCCcEEEEEEc----------------------CCEEEEEeCCCeEEEEECCCC---ceEeeCCccE
Q psy7057 146 DSTTGKCVHTMYGHPNFIYSVAAH----------------------GDLITSGGEDQCVCVYQNKAQ---NSFMIPAMSV 200 (557)
Q Consensus 146 d~~~~~~~~~~~~h~~~V~~l~~~----------------------~~~l~s~s~Dg~I~iwd~~~~---~~~~~~~~~v 200 (557)
|++++++...+.+|...|.+++|. +.+|++|+.|++|++||+++. ..+..|...|
T Consensus 262 d~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~v 341 (410)
T 1vyh_C 262 VVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWV 341 (410)
T ss_dssp ETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCE
T ss_pred ECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECCCCcE
Confidence 999999999999999999999993 458999999999999998766 5667799999
Q ss_pred EEEEEcCCCc-EEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEec
Q psy7057 201 WAVAILPNSD-IVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSA 270 (557)
Q Consensus 201 ~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~ 270 (557)
++++|+|++. |++|+.|++|++||+.+.+... ....|...+..+.+.+... .+++||.||+|+||++
T Consensus 342 ~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~--~~~~h~~~v~~l~~~~~~~-~l~sgs~D~~i~vW~~ 409 (410)
T 1vyh_C 342 RGVLFHSGGKFILSCADDKTLRVWDYKNKRCMK--TLNAHEHFVTSLDFHKTAP-YVVTGSVDQTVKVWEC 409 (410)
T ss_dssp EEEEECSSSSCEEEEETTTEEEEECCTTSCCCE--EEECCSSCEEEEEECSSSS-CEEEEETTSEEEEEC-
T ss_pred EEEEEcCCCCEEEEEeCCCeEEEEECCCCceEE--EEcCCCCcEEEEEEcCCCC-EEEEEeCCCcEEEEeC
Confidence 9999999998 9999999999999998766542 2346777899998887665 5899999999999985
No 2
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=2e-37 Score=316.99 Aligned_cols=265 Identities=24% Similarity=0.336 Sum_probs=234.0
Q ss_pred cEEEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC----------------CCCCCCCCEEEEEECCCeEEEE
Q psy7057 2 YKLSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND----------------LSPGAKVNTLLSASWDMTAKLW 64 (557)
Q Consensus 2 ~kl~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~Dg~i~iw 64 (557)
.+..++|.+|.+.|++++|+|+++ |++|+.||+|++||+.+ +.+++++.+|++|+.|+.+++|
T Consensus 45 ~~~~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw 124 (340)
T 1got_B 45 MRTRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIY 124 (340)
T ss_dssp CCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEE
T ss_pred chhheeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEE
Confidence 456789999999999999999998 88999999999999865 5678889999999999999999
Q ss_pred ECCCC----eEEEEEcccCCcEEEEEEcCCCEEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeCCCe-EEEEEC
Q psy7057 65 CLESQ----QCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDTD-FVSCSN 138 (557)
Q Consensus 65 d~~~~----~~~~~l~~h~~~V~~l~~~~~~~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~~~~-lvs~s~ 138 (557)
++.+. .....+.+|...|.++.|++++.+++++.|++|++|| .++.++..+.+|...|.+++|+|++. +++|+.
T Consensus 125 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~ 204 (340)
T 1got_B 125 NLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGAC 204 (340)
T ss_dssp ETTTCSBSCEEEEEEECCSSCEEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred ECccCCCcceeEEEecCCCccEEEEEECCCCcEEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeC
Confidence 99875 4667788999999999999999999999999999999 56788899999999999999999976 779999
Q ss_pred CCeEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCCceEe--e---CCccEEEEEEcCCCc-
Q psy7057 139 DASIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQNSFM--I---PAMSVWAVAILPNSD- 210 (557)
Q Consensus 139 Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~~~~~--~---~~~~v~~v~~~p~g~- 210 (557)
|++|++||+++++++.++.+|...|.+++| ++++|++|+.|++|++||++....+. . +...|.+++|+|++.
T Consensus 205 d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~ 284 (340)
T 1got_B 205 DASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRL 284 (340)
T ss_dssp TSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSE
T ss_pred CCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCE
Confidence 999999999999999999999999999999 67899999999999999988763332 1 224799999999999
Q ss_pred EEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEe
Q psy7057 211 IVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFS 269 (557)
Q Consensus 211 l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~ 269 (557)
+++|+.|+.|++||+....... ....|...+..+.+.+... .++++|.||+|+||+
T Consensus 285 l~~g~~d~~i~vwd~~~~~~~~--~~~~h~~~v~~~~~s~dg~-~l~s~s~D~~i~iWd 340 (340)
T 1got_B 285 LLAGYDDFNCNVWDALKADRAG--VLAGHDNRVSCLGVTDDGM-AVATGSWDSFLKIWN 340 (340)
T ss_dssp EEEEETTSEEEEEETTTCCEEE--EEECCSSCEEEEEECTTSS-CEEEEETTSCEEEEC
T ss_pred EEEECCCCeEEEEEcccCcEee--EeecCCCcEEEEEEcCCCC-EEEEEcCCccEEecC
Confidence 8899999999999998765432 3456778899998877654 589999999999996
No 3
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.8e-37 Score=318.23 Aligned_cols=277 Identities=21% Similarity=0.329 Sum_probs=233.6
Q ss_pred CcEEEEEeccCcc-cEEEEEEcCCCc-EEEEECCCcEEEEcCCC-------------------CCCCCCCCEEEEEECCC
Q psy7057 1 MYKLSTALYGHSM-DVRSLSVTPDGC-ILSASRDKSAKLWKPND-------------------LSPGAKVNTLLSASWDM 59 (557)
Q Consensus 1 ~~kl~~~l~gH~~-~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~-------------------~~~~~~~~~l~sgs~Dg 59 (557)
++++.++|.+|.+ .|++++|+|+|+ |++|+.|++|+|||+.. ++++|++++|++|+.|+
T Consensus 4 ~~~~~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~ 83 (345)
T 3fm0_A 4 SLVLLGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDA 83 (345)
T ss_dssp CEEEEEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTS
T ss_pred cEEEeeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCC
Confidence 3678899999998 999999999998 99999999999998754 56788999999999999
Q ss_pred eEEEEECCCC--eEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeCC-C---cEEEEEeCCCCCEEEEEEeCCCe
Q psy7057 60 TAKLWCLESQ--QCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSEE-G---EFLKTLTGHTDCVRGLAVLNDTD 132 (557)
Q Consensus 60 ~i~iwd~~~~--~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~-~---~~~~~l~~h~~~V~~l~~~~~~~ 132 (557)
++++|++.++ +++.++.+|...|.+++|+|++ .|++|+.|++|++||.. + .++..+.+|...|.+++|+|++.
T Consensus 84 ~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~ 163 (345)
T 3fm0_A 84 TTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQE 163 (345)
T ss_dssp CEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSS
T ss_pred cEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCC
Confidence 9999998876 4678899999999999999988 99999999999999943 2 35677889999999999999976
Q ss_pred -EEEEECCCeEEEEECCCCe--EEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC-----------------
Q psy7057 133 -FVSCSNDASIRVWDSTTGK--CVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ----------------- 190 (557)
Q Consensus 133 -lvs~s~Dg~I~vwd~~~~~--~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~----------------- 190 (557)
|++++.|++|++||+++++ +..++.+|...|++++| ++++|++++.|++|++|+....
T Consensus 164 ~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~ 243 (345)
T 3fm0_A 164 LLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKC 243 (345)
T ss_dssp CEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEE
T ss_pred EEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCccce
Confidence 7799999999999988775 55788999999999999 6789999999999999994211
Q ss_pred -ceEee-CCccEEEEEEcCCCc-EEEEEcCCcEEEEecCCCCcch-------hHHHhcccceeEEEeccCCCceeEEEEe
Q psy7057 191 -NSFMI-PAMSVWAVAILPNSD-IVTGSSDGIVRVFSANPDRQAE-------DAVQAQYAEEVKKLKSANEQEIGGVKVS 260 (557)
Q Consensus 191 -~~~~~-~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~~~~-------~~~~~~~~~~v~~l~~~~~~~~~~vs~s 260 (557)
..+.. |...|++++|+|++. +++++.|+.|++|+........ ......|...|..+.+.+..+..++++|
T Consensus 244 ~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s 323 (345)
T 3fm0_A 244 ICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCS 323 (345)
T ss_dssp EEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEEE
T ss_pred eEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCceEEEEcC
Confidence 11222 677899999999988 9999999999999987643211 1123467788999999988776789999
Q ss_pred CCCcEEEEecCCChhhH
Q psy7057 261 DDGIVRVFSANPDRQAE 277 (557)
Q Consensus 261 ~DG~IrvW~~~~~~~~~ 277 (557)
.||+|++|++...+...
T Consensus 324 ~Dg~v~~W~~~~~~~~~ 340 (345)
T 3fm0_A 324 DDGEVAFWKYQRPEGLH 340 (345)
T ss_dssp TTSCEEEEEECC-----
T ss_pred CCCcEEEEEecCCCCcc
Confidence 99999999998876543
No 4
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.9e-37 Score=315.07 Aligned_cols=264 Identities=22% Similarity=0.304 Sum_probs=233.5
Q ss_pred EEEEeccCcccEEEEEEcCC----Cc-EEEEECCCcEEEEcCCC------------------CCCCCCCCEEEEEECCCe
Q psy7057 4 LSTALYGHSMDVRSLSVTPD----GC-ILSASRDKSAKLWKPND------------------LSPGAKVNTLLSASWDMT 60 (557)
Q Consensus 4 l~~~l~gH~~~V~~l~~spd----g~-l~sgs~Dg~V~iWd~~~------------------~~~~~~~~~l~sgs~Dg~ 60 (557)
+.+.+++|.+.|++++|+|+ +. |+||+.|++|++|++.. +.+++++..+++++.|++
T Consensus 24 ~~~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~ 103 (321)
T 3ow8_A 24 LFKQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAH 103 (321)
T ss_dssp EEEETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSE
T ss_pred eeeecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCc
Confidence 34678899999999999985 34 89999999999999754 456677889999999999
Q ss_pred EEEEECCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeCCCe-EEEEE
Q psy7057 61 AKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDTD-FVSCS 137 (557)
Q Consensus 61 i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~~~~-lvs~s 137 (557)
|++||+.+++++..+..|...+.+++|+|++ .|++|+.|+.|++|+ ..+.....+..|...|.+++|+|++. |++++
T Consensus 104 i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~ 183 (321)
T 3ow8_A 104 IRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGA 183 (321)
T ss_dssp EEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEE
T ss_pred EEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEEEc
Confidence 9999999999999999999999999999998 999999999999999 56778888899999999999999977 77999
Q ss_pred CCCeEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC---ceEeeCCccEEEEEEcCCCc-E
Q psy7057 138 NDASIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ---NSFMIPAMSVWAVAILPNSD-I 211 (557)
Q Consensus 138 ~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~---~~~~~~~~~v~~v~~~p~g~-l 211 (557)
.|++|++||+++++++.++.+|...|.+++| ++.+|++++.|++|++||++.. ..+..|...|.+++|+|++. |
T Consensus 184 ~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l 263 (321)
T 3ow8_A 184 IDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHF 263 (321)
T ss_dssp TTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEE
T ss_pred CCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEECCCCCEE
Confidence 9999999999999999999999999999999 6779999999999999998765 56677899999999999998 8
Q ss_pred EEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEec
Q psy7057 212 VTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSA 270 (557)
Q Consensus 212 ~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~ 270 (557)
++++.|++|++||+.+.+... ....+...+..+.+.+... .+++++.||+|+||+.
T Consensus 264 ~s~s~D~~v~iwd~~~~~~~~--~~~~h~~~v~~v~~s~~g~-~l~s~~~d~~i~vwd~ 319 (321)
T 3ow8_A 264 VSSSSDKSVKVWDVGTRTCVH--TFFDHQDQVWGVKYNGNGS-KIVSVGDDQEIHIYDC 319 (321)
T ss_dssp EEEETTSCEEEEETTTTEEEE--EECCCSSCEEEEEECTTSS-EEEEEETTCCEEEEEC
T ss_pred EEEeCCCcEEEEeCCCCEEEE--EEcCCCCcEEEEEECCCCC-EEEEEeCCCeEEEEeC
Confidence 999999999999998776543 2345677888998877654 5899999999999996
No 5
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=2.5e-37 Score=311.21 Aligned_cols=268 Identities=16% Similarity=0.209 Sum_probs=228.4
Q ss_pred cEEEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC----------------CCCCCCCCEEEEEECCCeEEEE
Q psy7057 2 YKLSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND----------------LSPGAKVNTLLSASWDMTAKLW 64 (557)
Q Consensus 2 ~kl~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~Dg~i~iw 64 (557)
+++.++|.+|.+.|++++|+|++. |++|+.||+|++||+.+ +.+.+++++|++|+.|++|++|
T Consensus 3 l~~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vw 82 (304)
T 2ynn_A 3 LDIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVF 82 (304)
T ss_dssp CCCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEE
T ss_pred ceeEEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEE
Confidence 567899999999999999999998 89999999999999976 4566788999999999999999
Q ss_pred ECCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeCC-C-cEEEEEeCCCCCEEEEEEeCC-C-eEEEEECC
Q psy7057 65 CLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSEE-G-EFLKTLTGHTDCVRGLAVLND-T-DFVSCSND 139 (557)
Q Consensus 65 d~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~-~-~~~~~l~~h~~~V~~l~~~~~-~-~lvs~s~D 139 (557)
|+.+++++..+.+|...|.+++|+|++ .|++|+.|++|++||.. + .....+.+|...|.+++|+|. + .|++|+.|
T Consensus 83 d~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D 162 (304)
T 2ynn_A 83 NYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLD 162 (304)
T ss_dssp ETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETT
T ss_pred ECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCC
Confidence 999999999999999999999999998 99999999999999943 3 456778999999999999984 4 48899999
Q ss_pred CeEEEEECCCCeEEEEEe-CCCCcEEEEEE----cCCEEEEEeCCCeEEEEECCCC---ceEeeCCccEEEEEEcCCCc-
Q psy7057 140 ASIRVWDSTTGKCVHTMY-GHPNFIYSVAA----HGDLITSGGEDQCVCVYQNKAQ---NSFMIPAMSVWAVAILPNSD- 210 (557)
Q Consensus 140 g~I~vwd~~~~~~~~~~~-~h~~~V~~l~~----~~~~l~s~s~Dg~I~iwd~~~~---~~~~~~~~~v~~v~~~p~g~- 210 (557)
++|++||++++.+...+. +|...+..+.+ ++.+|++++.|++|++||+++. ..+..|...|.+++|+|++.
T Consensus 163 ~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~~ 242 (304)
T 2ynn_A 163 RTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPI 242 (304)
T ss_dssp SEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSE
T ss_pred CeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEECCCCCE
Confidence 999999998877666654 56678888888 4569999999999999998766 66778999999999999998
Q ss_pred EEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCcee-EEEEeCCCcEEEEecCC
Q psy7057 211 IVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIG-GVKVSDDGIVRVFSANP 272 (557)
Q Consensus 211 l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~-~vs~s~DG~IrvW~~~~ 272 (557)
|++|+.||+|++||..+.+.... ...+...+..+.+.+..... +++|+ |..+.+|++..
T Consensus 243 l~s~s~Dg~i~iWd~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~asg~-~~g~~~~~~~~ 302 (304)
T 2ynn_A 243 IISGSEDGTLKIWNSSTYKVEKT--LNVGLERSWCIATHPTGRKNYIASGF-DNGFTVLSLGN 302 (304)
T ss_dssp EEEEETTSCEEEEETTTCCEEEE--ECCSSSSEEEEEECTTCGGGCEEEEE-TTEEEEEECC-
T ss_pred EEEEcCCCeEEEEECCCCceeee--ccCCCccEEEEEECCCCCceEEEEec-CCceEEEEecc
Confidence 89999999999999988765432 23455677888877766544 45555 55577777664
No 6
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=5.3e-37 Score=311.19 Aligned_cols=270 Identities=27% Similarity=0.387 Sum_probs=232.4
Q ss_pred cEEEEEeccCcccEEEEEEcCCC-c-EEEEECCCcEEEEcCCC---------------------CCCCCCCCEEEEEECC
Q psy7057 2 YKLSTALYGHSMDVRSLSVTPDG-C-ILSASRDKSAKLWKPND---------------------LSPGAKVNTLLSASWD 58 (557)
Q Consensus 2 ~kl~~~l~gH~~~V~~l~~spdg-~-l~sgs~Dg~V~iWd~~~---------------------~~~~~~~~~l~sgs~D 58 (557)
+.+..+|.||.+.|++++|+|++ . |+||+.|++|++|++.. +.+++++.+|++|+.|
T Consensus 7 ~~l~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D 86 (319)
T 3frx_A 7 LVLRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWD 86 (319)
T ss_dssp EEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETT
T ss_pred EEEEEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCC
Confidence 57888999999999999999975 4 88999999999998642 5678889999999999
Q ss_pred CeEEEEECCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeCCCcEEEEEeCCCCCEEEEEEeCCC------
Q psy7057 59 MTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSEEGEFLKTLTGHTDCVRGLAVLNDT------ 131 (557)
Q Consensus 59 g~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~~~~~~~l~~h~~~V~~l~~~~~~------ 131 (557)
++|++||+.+++++..+.+|...|.+++|+|++ .|++|+.|++|++||..+.++..+.+|...|.++.++|..
T Consensus 87 ~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~ 166 (319)
T 3frx_A 87 KTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQCLATLLGHNDWVSQVRVVPNEKADDDS 166 (319)
T ss_dssp SEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECCC------C
T ss_pred CEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeccCCcEEEEEEccCCCCCCCc
Confidence 999999999999999999999999999999988 9999999999999999999999999999999999999853
Q ss_pred -eEEEEECCCeEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC---ceEeeCCccEEEEEE
Q psy7057 132 -DFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ---NSFMIPAMSVWAVAI 205 (557)
Q Consensus 132 -~lvs~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~---~~~~~~~~~v~~v~~ 205 (557)
.+++++.|++|++||++++++...+.+|...|.++++ ++.+|++++.|++|++||+... ..+. +...|.+++|
T Consensus 167 ~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~ 245 (319)
T 3frx_A 167 VTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLS-AQDEVFSLAF 245 (319)
T ss_dssp CEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEE-CCSCEEEEEE
T ss_pred cEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEec-CCCcEEEEEE
Confidence 4789999999999999999999999999999999999 6789999999999999998776 2333 4568999999
Q ss_pred cCCCcEEEEEcCCcEEEEecCCCCcchhH------HHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecCCC
Q psy7057 206 LPNSDIVTGSSDGIVRVFSANPDRQAEDA------VQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPD 273 (557)
Q Consensus 206 ~p~g~l~sg~~Dg~I~iwd~~~~~~~~~~------~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~~ 273 (557)
+|++.+++++.++.+++|+++........ ....+...+..+.+.++.. .+++|+.||.|+||++.+.
T Consensus 246 sp~~~~la~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~-~l~sg~~Dg~i~vWd~~t~ 318 (319)
T 3frx_A 246 SPNRYWLAAATATGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQ-TLFAGYTDNVIRVWQVMTA 318 (319)
T ss_dssp CSSSSEEEEEETTEEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSS-EEEEEETTSCEEEEEEEEC
T ss_pred cCCCCEEEEEcCCCcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCC-EEEEeecCceEEEEEEeec
Confidence 99999665566677999998765432111 1123445677788877655 5899999999999998653
No 7
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=2.4e-36 Score=309.31 Aligned_cols=270 Identities=23% Similarity=0.299 Sum_probs=229.1
Q ss_pred cEEEEEeccCcccEEEEEE-----cC-CCc-EEEEECCCcEEEEcCCC-----------------------CCCCCCCCE
Q psy7057 2 YKLSTALYGHSMDVRSLSV-----TP-DGC-ILSASRDKSAKLWKPND-----------------------LSPGAKVNT 51 (557)
Q Consensus 2 ~kl~~~l~gH~~~V~~l~~-----sp-dg~-l~sgs~Dg~V~iWd~~~-----------------------~~~~~~~~~ 51 (557)
+++..+|.||.+.|++++| ++ ++. |+||+.|++|++||+.. +.+++++.+
T Consensus 11 ~~~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~ 90 (343)
T 2xzm_R 11 VVKRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCF 90 (343)
T ss_dssp EEEEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTE
T ss_pred eeeeeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCE
Confidence 4677899999999999999 76 777 89999999999999752 566788999
Q ss_pred EEEEECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeCCCcEEEEEe---CCCCCEEEEEE
Q psy7057 52 LLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSEEGEFLKTLT---GHTDCVRGLAV 127 (557)
Q Consensus 52 l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~~~~~~~l~---~h~~~V~~l~~ 127 (557)
+++|+.|++|++||+.+++++..+.+|...|.+++|+|++ .|++++.|++|++||..+.....+. +|...|.+++|
T Consensus 91 l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~ 170 (343)
T 2xzm_R 91 AISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSCVRY 170 (343)
T ss_dssp EEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEEEEEE
T ss_pred EEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeecccCCCceeeeeee
Confidence 9999999999999999999999999999999999999998 9999999999999997776665554 78999999999
Q ss_pred eCCC-----------eEEEEECCCeEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC---c
Q psy7057 128 LNDT-----------DFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ---N 191 (557)
Q Consensus 128 ~~~~-----------~lvs~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~---~ 191 (557)
+|++ .|++++.|++|++|| ...+....+.+|...|.+++| ++++|++|+.|+.|++||+... .
T Consensus 171 ~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd-~~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~~ 249 (343)
T 2xzm_R 171 SPIMKSANKVQPFAPYFASVGWDGRLKVWN-TNFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNLTYPQ 249 (343)
T ss_dssp CCCCCSCSCCCSSCCEEEEEETTSEEEEEE-TTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCSSCS
T ss_pred ccccccccccCCCCCEEEEEcCCCEEEEEc-CCCceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECCCCcccc
Confidence 9875 488999999999999 567788889999999999999 6789999999999999997432 2
Q ss_pred eEeeCCccEEEEEEcCCCcEEEEEcCCcEEEEecCCCCcchhHH-----------HhcccceeEEEeccCCCceeEEEEe
Q psy7057 192 SFMIPAMSVWAVAILPNSDIVTGSSDGIVRVFSANPDRQAEDAV-----------QAQYAEEVKKLKSANEQEIGGVKVS 260 (557)
Q Consensus 192 ~~~~~~~~v~~v~~~p~g~l~sg~~Dg~I~iwd~~~~~~~~~~~-----------~~~~~~~v~~l~~~~~~~~~~vs~s 260 (557)
....+...|.+++|+|++.+++++.|+.|++|++.+........ ...+...+..+.+.+... .+++|+
T Consensus 250 ~~~~~~~~v~~v~~sp~~~~la~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~-~l~sg~ 328 (343)
T 2xzm_R 250 REFDAGSTINQIAFNPKLQWVAVGTDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGK-KLFAGF 328 (343)
T ss_dssp EEEECSSCEEEEEECSSSCEEEEEESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSC-CEEEEE
T ss_pred eeecCCCcEEEEEECCCCCEEEEECCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCC-eEEEec
Confidence 33345667999999999998888889999999997655432111 114556688888877655 589999
Q ss_pred CCCcEEEEecCCC
Q psy7057 261 DDGIVRVFSANPD 273 (557)
Q Consensus 261 ~DG~IrvW~~~~~ 273 (557)
.||+||+|++.++
T Consensus 329 ~Dg~v~~w~~~~g 341 (343)
T 2xzm_R 329 TDGVIRTFSFETS 341 (343)
T ss_dssp TTSEEEEEEEEEE
T ss_pred CCceEEEEEEEcc
Confidence 9999999997643
No 8
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=2.9e-37 Score=316.92 Aligned_cols=261 Identities=20% Similarity=0.223 Sum_probs=220.4
Q ss_pred ccCcccEEEEEEcCCCcEEEEECCCcEEEEcCCC---------------------------CCCCCCCCEEEEEECCCeE
Q psy7057 9 YGHSMDVRSLSVTPDGCILSASRDKSAKLWKPND---------------------------LSPGAKVNTLLSASWDMTA 61 (557)
Q Consensus 9 ~gH~~~V~~l~~spdg~l~sgs~Dg~V~iWd~~~---------------------------~~~~~~~~~l~sgs~Dg~i 61 (557)
..|...|.+++|+|||++++++.|+++|+||... ++++++ +.|++|+.||+|
T Consensus 27 ~~~~~~v~~~~fs~dG~~l~~~sd~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d-~~l~~~s~dg~v 105 (344)
T 4gqb_B 27 ACMERQLEAARYRSDGALLLGASSLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGE-RGILVASDSGAV 105 (344)
T ss_dssp SSCCSEEEEEEECTTSCEEEEEECCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETT-TEEEEEETTSEE
T ss_pred ccccCCEEEEEECCCCCEEEEEeCCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCC-CeEEEEECCCEE
Confidence 4578889999999999955444588888886321 445555 578999999999
Q ss_pred EEEECCCCeEE----EEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeCCCe--E
Q psy7057 62 KLWCLESQQCK----LTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDTD--F 133 (557)
Q Consensus 62 ~iwd~~~~~~~----~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~~~~--l 133 (557)
+|||+.+++.+ ..+.+|...|++++|+|++ +|++|+.|++|++|| .+++++..+.+|...|++++|++++. |
T Consensus 106 ~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l 185 (344)
T 4gqb_B 106 ELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVF 185 (344)
T ss_dssp EEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTEE
T ss_pred EEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCce
Confidence 99999988643 3356899999999999998 999999999999999 57788999999999999999999863 7
Q ss_pred EEEECCCeEEEEECCCCeEEEEEe--CCCCcEEEEEE---cCCEEEEEeCCCeEEEEECCCC---ceEeeCCccEEEEEE
Q psy7057 134 VSCSNDASIRVWDSTTGKCVHTMY--GHPNFIYSVAA---HGDLITSGGEDQCVCVYQNKAQ---NSFMIPAMSVWAVAI 205 (557)
Q Consensus 134 vs~s~Dg~I~vwd~~~~~~~~~~~--~h~~~V~~l~~---~~~~l~s~s~Dg~I~iwd~~~~---~~~~~~~~~v~~v~~ 205 (557)
++++.|++|++||++++++...+. .|...+.++++ ++.+|++|+.|++|++||+++. ..+..|...|++++|
T Consensus 186 ~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~f 265 (344)
T 4gqb_B 186 LSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLVF 265 (344)
T ss_dssp EEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCEEEEEE
T ss_pred eeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEEEEE
Confidence 799999999999999999888774 45667899998 3468999999999999997755 678889999999999
Q ss_pred cCCCc--EEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecCCC
Q psy7057 206 LPNSD--IVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPD 273 (557)
Q Consensus 206 ~p~g~--l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~~ 273 (557)
+|++. |++|+.|++|+|||+.+++... ...|...|..+.+.+.....++++|.||+|++|++..+
T Consensus 266 sp~g~~~lasgs~D~~i~vwd~~~~~~~~---~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~ 332 (344)
T 4gqb_B 266 SPHSVPFLASLSEDCSLAVLDSSLSELFR---SQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTE 332 (344)
T ss_dssp CSSSSCCEEEEETTSCEEEECTTCCEEEE---ECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC-
T ss_pred ccCCCeEEEEEeCCCeEEEEECCCCcEEE---EcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCC
Confidence 99985 8899999999999998876542 45688899999999888777889999999999999764
No 9
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.6e-36 Score=309.12 Aligned_cols=271 Identities=21% Similarity=0.254 Sum_probs=218.6
Q ss_pred CcEEEEEeccCcccEEEEEEcCCCcEEEEECCCcEEEEcCCC--------------------CCCCCCCCEEEEEECCCe
Q psy7057 1 MYKLSTALYGHSMDVRSLSVTPDGCILSASRDKSAKLWKPND--------------------LSPGAKVNTLLSASWDMT 60 (557)
Q Consensus 1 ~~kl~~~l~gH~~~V~~l~~spdg~l~sgs~Dg~V~iWd~~~--------------------~~~~~~~~~l~sgs~Dg~ 60 (557)
.+++.++|.+|.+.|++++|+|+ .|++|+.|++|++|++.. ++++|++.+|++|+.|++
T Consensus 3 ~~~~~~~~~~h~~~v~~~~~s~~-~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~ 81 (330)
T 2hes_X 3 SINLIKSLKLYKEKIWSFDFSQG-ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDST 81 (330)
T ss_dssp CCEEEEEEECCSSCEEEEEEETT-EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSC
T ss_pred ccccceeeccCCCceeeeccCCC-EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCc
Confidence 36788999999999999999998 899999999999998753 456778899999999999
Q ss_pred EEEEECCC-------CeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeCC-----CcEEEEEeCCCCCEEEEEE
Q psy7057 61 AKLWCLES-------QQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSEE-----GEFLKTLTGHTDCVRGLAV 127 (557)
Q Consensus 61 i~iwd~~~-------~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~-----~~~~~~l~~h~~~V~~l~~ 127 (557)
|++|++.. .+++..+.+|...|.+++|+|++ +|++|+.|++|++||.. .+++..+.+|...|.+++|
T Consensus 82 v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~ 161 (330)
T 2hes_X 82 VSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIW 161 (330)
T ss_dssp EEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEE
T ss_pred EEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEE
Confidence 99999843 45778899999999999999998 99999999999999952 2467788999999999999
Q ss_pred eCCCe-EEEEECCCeEEEEECCCC--eEEEEEeCCCCcEEEEEEc----CCEEEEEeCCCeEEEEECCCC----------
Q psy7057 128 LNDTD-FVSCSNDASIRVWDSTTG--KCVHTMYGHPNFIYSVAAH----GDLITSGGEDQCVCVYQNKAQ---------- 190 (557)
Q Consensus 128 ~~~~~-lvs~s~Dg~I~vwd~~~~--~~~~~~~~h~~~V~~l~~~----~~~l~s~s~Dg~I~iwd~~~~---------- 190 (557)
+|++. |++++.|++|++||+.++ +++..+.+|...|++++|+ +..|++++.|++|++|++...
T Consensus 162 ~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~ 241 (330)
T 2hes_X 162 HPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVC 241 (330)
T ss_dssp CSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEE
T ss_pred CCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEE
Confidence 99976 779999999999998776 6888999999999999993 458999999999999996432
Q ss_pred -ceEee-CCccEEEEEEcCCCcEEEEEcCCcEEEEecCCCCcch-hHHHhcccc-eeEEEeccCC-CceeEEEEeCCCcE
Q psy7057 191 -NSFMI-PAMSVWAVAILPNSDIVTGSSDGIVRVFSANPDRQAE-DAVQAQYAE-EVKKLKSANE-QEIGGVKVSDDGIV 265 (557)
Q Consensus 191 -~~~~~-~~~~v~~v~~~p~g~l~sg~~Dg~I~iwd~~~~~~~~-~~~~~~~~~-~v~~l~~~~~-~~~~~vs~s~DG~I 265 (557)
..+.. |...|++++|++++.|++++.||+|+||+...+.... ......|.. .+..+.+.+. +...++++|.||+|
T Consensus 242 ~~~~~~~h~~~v~~v~~s~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v 321 (330)
T 2hes_X 242 EAILPDVHKRQVYNVAWGFNGLIASVGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATGGDDGIV 321 (330)
T ss_dssp EEECCSCCSSCEEEEEECTTSCEEEEETTSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEETTSEE
T ss_pred eeecccccccceEEEEEcCCCEEEEEeCCCEEEEEEcCCCceEEEeccccccccceEEEEEEecCCCceEEEEecCCCcE
Confidence 12222 7789999999988879999999999999987653111 111123444 6788887764 45568999999999
Q ss_pred EEEecCC
Q psy7057 266 RVFSANP 272 (557)
Q Consensus 266 rvW~~~~ 272 (557)
+||++..
T Consensus 322 ~~W~~~~ 328 (330)
T 2hes_X 322 NFWSLEK 328 (330)
T ss_dssp EEEEC--
T ss_pred EEEEecc
Confidence 9999764
No 10
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=6.2e-36 Score=308.00 Aligned_cols=264 Identities=22% Similarity=0.283 Sum_probs=230.8
Q ss_pred EEEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC----------------CCCCCCCCEEEEEECCCeEEEEE
Q psy7057 3 KLSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND----------------LSPGAKVNTLLSASWDMTAKLWC 65 (557)
Q Consensus 3 kl~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~Dg~i~iwd 65 (557)
+..++|.||.+.|++++|+|+++ |+||+.||+|++||..+ +.++|++..|++|+.|+++++|+
T Consensus 55 ~~~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~ 134 (354)
T 2pbi_B 55 KTRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYP 134 (354)
T ss_dssp CEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEE
T ss_pred EEEEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEE
Confidence 56789999999999999999998 99999999999999765 56788999999999999999999
Q ss_pred CCCC------eEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeCC--C-eEE
Q psy7057 66 LESQ------QCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLND--T-DFV 134 (557)
Q Consensus 66 ~~~~------~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~~--~-~lv 134 (557)
+... .....+.+|...|.+++|+|++ .|++++.|++|++|| .+++++..+.+|...|.+++++|+ + .|+
T Consensus 135 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~ 214 (354)
T 2pbi_B 135 LTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFV 214 (354)
T ss_dssp CCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEE
T ss_pred EeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEE
Confidence 8643 2456677899999999999988 999999999999999 577889999999999999999874 3 488
Q ss_pred EEECCCeEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCCceEe---e--CCccEEEEEEcC
Q psy7057 135 SCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQNSFM---I--PAMSVWAVAILP 207 (557)
Q Consensus 135 s~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~~~~~---~--~~~~v~~v~~~p 207 (557)
+|+.|++|++||+++++++..+.+|...|.+++| ++..|++++.|++|++||++....+. . +...+.+++|+|
T Consensus 215 sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~ 294 (354)
T 2pbi_B 215 SGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSL 294 (354)
T ss_dssp EEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECT
T ss_pred EEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeC
Confidence 9999999999999999999999999999999999 67899999999999999988763322 1 224689999999
Q ss_pred CCc-EEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEe
Q psy7057 208 NSD-IVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFS 269 (557)
Q Consensus 208 ~g~-l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~ 269 (557)
++. +++|+.|++|++||+.++.... ....|...+..+.+.++.. .++++|.||+|+||+
T Consensus 295 ~g~~l~~g~~d~~i~vwd~~~~~~~~--~l~~h~~~v~~l~~spdg~-~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 295 SGRLLFAGYNDYTINVWDVLKGSRVS--ILFGHENRVSTLRVSPDGT-AFCSGSWDHTLRVWA 354 (354)
T ss_dssp TSSEEEEEETTSCEEEEETTTCSEEE--EECCCSSCEEEEEECTTSS-CEEEEETTSEEEEEC
T ss_pred CCCEEEEEECCCcEEEEECCCCceEE--EEECCCCcEEEEEECCCCC-EEEEEcCCCCEEecC
Confidence 999 8899999999999998776442 3346788899999887655 689999999999995
No 11
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=1.1e-36 Score=316.63 Aligned_cols=272 Identities=22% Similarity=0.293 Sum_probs=230.2
Q ss_pred cEEEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC----------------CCCCCCCCEEEEEECCCeEEEE
Q psy7057 2 YKLSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND----------------LSPGAKVNTLLSASWDMTAKLW 64 (557)
Q Consensus 2 ~kl~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~Dg~i~iw 64 (557)
+.+.++|.||.+.|++++|+|++. |+||+.|++|+|||+.+ +++++++.+|++|+.|+++++|
T Consensus 56 ~~~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw 135 (380)
T 3iz6_a 56 LVCCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIF 135 (380)
T ss_dssp CEEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEE
T ss_pred eEEeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEE
Confidence 456789999999999999999998 99999999999999865 6788899999999999999999
Q ss_pred ECCCCe-------EEEEEcccCCcEEEEEEcCCC--EEEEEECCCeEEEEe-CCCcEEEEE-----eCCCCCEEEEEEeC
Q psy7057 65 CLESQQ-------CKLTIRQHEMAVWGVIQLANG--IIVTGCADKTIKLHS-EEGEFLKTL-----TGHTDCVRGLAVLN 129 (557)
Q Consensus 65 d~~~~~-------~~~~l~~h~~~V~~l~~~~~~--~l~sgs~dg~I~vwd-~~~~~~~~l-----~~h~~~V~~l~~~~ 129 (557)
++.+.. ....+.+|...|.++.|.|++ .|++|+.|++|++|| .++..+..+ .+|...|.++++++
T Consensus 136 ~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 215 (380)
T 3iz6_a 136 NLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINS 215 (380)
T ss_dssp ECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECS
T ss_pred ECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeec
Confidence 986532 345678999999999999964 799999999999999 566777766 67999999999986
Q ss_pred -CC-eEEEEECCCeEEEEECC-CCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCCceEe---eC-----
Q psy7057 130 -DT-DFVSCSNDASIRVWDST-TGKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQNSFM---IP----- 196 (557)
Q Consensus 130 -~~-~lvs~s~Dg~I~vwd~~-~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~~~~~---~~----- 196 (557)
++ .|++|+.|++|++||++ .++++..+.+|...|.+++| ++.+|++|+.|++|++||+++...+. .+
T Consensus 216 ~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~ 295 (380)
T 3iz6_a 216 LNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRND 295 (380)
T ss_dssp SSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSC
T ss_pred CCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccc
Confidence 44 47899999999999998 45788899999999999999 67899999999999999988763332 21
Q ss_pred --CccEEEEEEcCCCc-EEEEEcCCcEEEEecCCCCcchhH--HHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecC
Q psy7057 197 --AMSVWAVAILPNSD-IVTGSSDGIVRVFSANPDRQAEDA--VQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSAN 271 (557)
Q Consensus 197 --~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~~~~~~--~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~ 271 (557)
...|.+++|+|+++ +++|+.||.|++||....+..... ....|...+..+.+.++.. .+++||.||+|+||++.
T Consensus 296 ~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~-~l~sgs~D~~i~iW~~~ 374 (380)
T 3iz6_a 296 NELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGS-ALCTGSWDKNLKIWAFS 374 (380)
T ss_dssp CSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSS-EEEEECTTSCEEEEECC
T ss_pred cccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCC-EEEEeeCCCCEEEEecC
Confidence 12489999999999 889999999999998776543221 1245778889998887655 58999999999999998
Q ss_pred CCh
Q psy7057 272 PDR 274 (557)
Q Consensus 272 ~~~ 274 (557)
..+
T Consensus 375 ~~~ 377 (380)
T 3iz6_a 375 GHR 377 (380)
T ss_dssp SSS
T ss_pred CCc
Confidence 764
No 12
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=4.1e-36 Score=309.79 Aligned_cols=263 Identities=20% Similarity=0.215 Sum_probs=216.3
Q ss_pred eccCcccEEEEEEcCCCc-EEEEEC------CCcEEEEcCCC--------------------CCCCCCCCEEEEEECCCe
Q psy7057 8 LYGHSMDVRSLSVTPDGC-ILSASR------DKSAKLWKPND--------------------LSPGAKVNTLLSASWDMT 60 (557)
Q Consensus 8 l~gH~~~V~~l~~spdg~-l~sgs~------Dg~V~iWd~~~--------------------~~~~~~~~~l~sgs~Dg~ 60 (557)
..+|.+.|++++|+|||+ |++||. |++|++|+..+ +++++++ .+++++.|++
T Consensus 38 p~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~-~~l~~s~dg~ 116 (357)
T 4g56_B 38 PACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEK-GILVASDSGA 116 (357)
T ss_dssp --CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTT-EEEEEETTSC
T ss_pred cccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCC-CEEEEECCCE
Confidence 457999999999999999 889987 78899998754 4556654 5778899999
Q ss_pred EEEEECCCCeEE----EEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeCCC--e
Q psy7057 61 AKLWCLESQQCK----LTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDT--D 132 (557)
Q Consensus 61 i~iwd~~~~~~~----~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~~~--~ 132 (557)
|+|||+.+++.. ....+|...|.+++|+|++ .|++|+.|++|++|| .+++++..+.+|...|++++|++++ .
T Consensus 117 v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~ 196 (357)
T 4g56_B 117 VELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTI 196 (357)
T ss_dssp EEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSC
T ss_pred EEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCce
Confidence 999999887654 3455899999999999998 999999999999999 5678889999999999999999885 4
Q ss_pred EEEEECCCeEEEEECCCCeEEEEEe--CCCCcEEEEEEc---CCEEEEEeCCCeEEEEECCCC---ceEeeCCccEEEEE
Q psy7057 133 FVSCSNDASIRVWDSTTGKCVHTMY--GHPNFIYSVAAH---GDLITSGGEDQCVCVYQNKAQ---NSFMIPAMSVWAVA 204 (557)
Q Consensus 133 lvs~s~Dg~I~vwd~~~~~~~~~~~--~h~~~V~~l~~~---~~~l~s~s~Dg~I~iwd~~~~---~~~~~~~~~v~~v~ 204 (557)
+++++.|++|++||+++++++..+. .|...+.+++|. +.+|++|+.|+.|++||+++. ..+..|...|++++
T Consensus 197 ~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~ 276 (357)
T 4g56_B 197 FLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITGLA 276 (357)
T ss_dssp EEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEEEE
T ss_pred eeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccceeEEEEE
Confidence 8899999999999999988776554 467789999993 458999999999999998765 67778889999999
Q ss_pred EcCCCc--EEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecCCCh
Q psy7057 205 ILPNSD--IVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPDR 274 (557)
Q Consensus 205 ~~p~g~--l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~~~ 274 (557)
|+|++. |++|+.|++|+|||+++++.... ..|...|..+.+.|.+...++++|.||+|++|++....
T Consensus 277 ~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~---~~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~~ 345 (357)
T 4g56_B 277 YSYHSSPFLASISEDCTVAVLDADFSEVFRD---LSHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSEG 345 (357)
T ss_dssp ECSSSSCCEEEEETTSCEEEECTTSCEEEEE---CCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC---
T ss_pred EcCCCCCEEEEEeCCCEEEEEECCCCcEeEE---CCCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCC
Confidence 999975 78999999999999988765532 25778899999988667778999999999999997643
No 13
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=1.2e-34 Score=293.81 Aligned_cols=272 Identities=24% Similarity=0.333 Sum_probs=230.4
Q ss_pred cEEEEEeccCcccEEEEEEcCC-Cc-EEEEECCCcEEEEcCCC---------------------CCCCCCCCEEEEEECC
Q psy7057 2 YKLSTALYGHSMDVRSLSVTPD-GC-ILSASRDKSAKLWKPND---------------------LSPGAKVNTLLSASWD 58 (557)
Q Consensus 2 ~kl~~~l~gH~~~V~~l~~spd-g~-l~sgs~Dg~V~iWd~~~---------------------~~~~~~~~~l~sgs~D 58 (557)
.++..+|+||.+.|++|+|+|+ ++ |+|||.|++|+|||+.. +.+++++.+|++++.|
T Consensus 28 ~~l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d 107 (340)
T 4aow_A 28 MTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWD 107 (340)
T ss_dssp EEEEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred eEEEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEccc
Confidence 4677899999999999999998 45 88999999999999754 5677889999999999
Q ss_pred CeEEEEECCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeCCCcE--EEEEeCCCCCEEEEEEeCCC---e
Q psy7057 59 MTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSEEGEF--LKTLTGHTDCVRGLAVLNDT---D 132 (557)
Q Consensus 59 g~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~~~~--~~~l~~h~~~V~~l~~~~~~---~ 132 (557)
+.|++|+............+...+..+.+.+.+ .|++|+.|+.+++||..... ...+.+|...+.++++++++ .
T Consensus 108 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 187 (340)
T 4aow_A 108 GTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPI 187 (340)
T ss_dssp SEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCE
T ss_pred ccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcE
Confidence 999999999999988888899999999999987 89999999999999965443 34456899999999998773 3
Q ss_pred EEEEECCCeEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCCceE--eeCCccEEEEEEcCC
Q psy7057 133 FVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQNSF--MIPAMSVWAVAILPN 208 (557)
Q Consensus 133 lvs~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~~~~--~~~~~~v~~v~~~p~ 208 (557)
+++++.|++|++||+++++++..+.+|...|.++++ ++++|++|+.|++|++||++....+ ..+...|.+++++|+
T Consensus 188 ~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~ 267 (340)
T 4aow_A 188 IVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPN 267 (340)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECSSCEEEEEECSS
T ss_pred EEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCCceEEeeecCCC
Confidence 679999999999999999999999999999999999 6789999999999999998877322 234568999999999
Q ss_pred CcEEEEEcCCcEEEEecCCCCcc-------hhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecCCCh
Q psy7057 209 SDIVTGSSDGIVRVFSANPDRQA-------EDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPDR 274 (557)
Q Consensus 209 g~l~sg~~Dg~I~iwd~~~~~~~-------~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~~~ 274 (557)
+.+++++.|+.|++|+++..... .......+...+..+.+.++.. .+++|+.||.||||++.++.
T Consensus 268 ~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~-~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 268 RYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQ-TLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp SSEEEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSS-EEEEEETTSCEEEEEEEC--
T ss_pred CceeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCC-EEEEEeCCCEEEEEeCCCcC
Confidence 99999999999999999875432 1223345777888898877655 58999999999999998764
No 14
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=2.4e-34 Score=289.60 Aligned_cols=268 Identities=25% Similarity=0.406 Sum_probs=228.6
Q ss_pred CcEEEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC----------------CCCCCCCCEEEEEECCCeEEE
Q psy7057 1 MYKLSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND----------------LSPGAKVNTLLSASWDMTAKL 63 (557)
Q Consensus 1 ~~kl~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~Dg~i~i 63 (557)
.|++..++.+|.+.|++++|+|+++ |++|+.||.|++|++.+ +.+++++++|++|+.|+.|++
T Consensus 12 ~~~~~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~v 91 (312)
T 4ery_A 12 NYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKI 91 (312)
T ss_dssp CCEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred CceeEEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEE
Confidence 3678899999999999999999998 88999999999999865 677889999999999999999
Q ss_pred EECCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeCCCe-EEEEECCC
Q psy7057 64 WCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDTD-FVSCSNDA 140 (557)
Q Consensus 64 wd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~~~~-lvs~s~Dg 140 (557)
||+.+++++..+.+|...|.+++|+|++ .|++|+.|+.|++|| .+++++..+..|...|.+++|+|++. |++++.|+
T Consensus 92 wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~ 171 (312)
T 4ery_A 92 WDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG 171 (312)
T ss_dssp EETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred EECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCC
Confidence 9999999999999999999999999988 999999999999999 56788899999999999999999976 77999999
Q ss_pred eEEEEECCCCeEEEEEe-CCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC---ceEeeCCccE---EEEEEcCCCc-
Q psy7057 141 SIRVWDSTTGKCVHTMY-GHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ---NSFMIPAMSV---WAVAILPNSD- 210 (557)
Q Consensus 141 ~I~vwd~~~~~~~~~~~-~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~---~~~~~~~~~v---~~v~~~p~g~- 210 (557)
.|++||+++++++..+. .+...+.++++ ++++|++++.|+.|++||+.+. ..+..|...+ ......+++.
T Consensus 172 ~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (312)
T 4ery_A 172 LCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKW 251 (312)
T ss_dssp CEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCE
T ss_pred cEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcE
Confidence 99999999999888775 45678999999 6789999999999999998776 3444454432 2223335566
Q ss_pred EEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEe--CCCcEEEEecC
Q psy7057 211 IVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVS--DDGIVRVFSAN 271 (557)
Q Consensus 211 l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s--~DG~IrvW~~~ 271 (557)
+++|+.||.|++|++.+.+... ....|...+..+.+.+.... +++++ .||+|++|+.+
T Consensus 252 l~sg~~dg~i~vwd~~~~~~~~--~~~~h~~~v~~~~~~p~~~~-l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 252 IVSGSEDNLVYIWNLQTKEIVQ--KLQGHTDVVISTACHPTENI-IASAALENDKTIKLWKSD 311 (312)
T ss_dssp EEECCTTSCEEEEETTTCCEEE--EECCCSSCEEEEEECSSSSE-EEEEECTTTCCEEEEECC
T ss_pred EEEECCCCEEEEEECCCchhhh--hhhccCCcEEEEeecCcCCc-eEEEEccCCccEEEecCC
Confidence 8899999999999998876542 33457778888888877664 55554 79999999864
No 15
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=3.5e-34 Score=298.97 Aligned_cols=260 Identities=23% Similarity=0.343 Sum_probs=221.8
Q ss_pred cCcccEEEEEEcCCCcEEEEECCCcEEEEcCCC----------------------------------CCCCCCCCEEEEE
Q psy7057 10 GHSMDVRSLSVTPDGCILSASRDKSAKLWKPND----------------------------------LSPGAKVNTLLSA 55 (557)
Q Consensus 10 gH~~~V~~l~~spdg~l~sgs~Dg~V~iWd~~~----------------------------------~~~~~~~~~l~sg 55 (557)
+|.+.|+|++|+|||++++.+.++++++|++.+ +++++++.+|++|
T Consensus 62 ~h~~~V~~v~fspdg~~la~g~~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s~ 141 (393)
T 1erj_A 62 DHTSVVCCVKFSNDGEYLATGCNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATG 141 (393)
T ss_dssp ECSSCCCEEEECTTSSEEEEECBSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEEE
T ss_pred CCCCEEEEEEECCCCCEEEEEcCCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEEE
Confidence 699999999999999944344589999998754 3467889999999
Q ss_pred ECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeC-CCcEEEEEeCCCCCEEEEEEeC-CCe
Q psy7057 56 SWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSE-EGEFLKTLTGHTDCVRGLAVLN-DTD 132 (557)
Q Consensus 56 s~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~-~~~~~~~l~~h~~~V~~l~~~~-~~~ 132 (557)
+.|++|++||+.+++.+..+.+|...|.+++|+|++ .|++++.|++|++||. ++++...+. +...+.+++++| ++.
T Consensus 142 ~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~ 220 (393)
T 1erj_A 142 AEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLS-IEDGVTTVAVSPGDGK 220 (393)
T ss_dssp ETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSTTCC
T ss_pred cCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEE-cCCCcEEEEEECCCCC
Confidence 999999999999999999999999999999999988 9999999999999994 556665555 667899999998 665
Q ss_pred -EEEEECCCeEEEEECCCCeEEEEE-------eCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC------------
Q psy7057 133 -FVSCSNDASIRVWDSTTGKCVHTM-------YGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ------------ 190 (557)
Q Consensus 133 -lvs~s~Dg~I~vwd~~~~~~~~~~-------~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~------------ 190 (557)
|++|+.|++|++||+++++++..+ .+|...|.+++| ++.+|++++.|++|++||+...
T Consensus 221 ~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~ 300 (393)
T 1erj_A 221 YIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSG 300 (393)
T ss_dssp EEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC---------------
T ss_pred EEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCC
Confidence 779999999999999999888777 579999999999 6789999999999999997542
Q ss_pred ---ceEeeCCccEEEEEEcCCCc-EEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCC-----CceeEEEEeC
Q psy7057 191 ---NSFMIPAMSVWAVAILPNSD-IVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANE-----QEIGGVKVSD 261 (557)
Q Consensus 191 ---~~~~~~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~-----~~~~~vs~s~ 261 (557)
..+..|...|.+++++|++. |++|+.|+.|++||..++.... ....|...+..+.+.+. ....+++||.
T Consensus 301 ~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~--~l~~h~~~v~~v~~~~~~~~~p~~~~l~sgs~ 378 (393)
T 1erj_A 301 TCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLL--MLQGHRNSVISVAVANGSSLGPEYNVFATGSG 378 (393)
T ss_dssp CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEE--EEECCSSCEEEEEECSSCTTCTTCEEEEEEET
T ss_pred cceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEE--EECCCCCCEEEEEecCCcCcCCCCCEEEEECC
Confidence 34567888999999999998 8999999999999998876542 34567778888877653 4567899999
Q ss_pred CCcEEEEecCC
Q psy7057 262 DGIVRVFSANP 272 (557)
Q Consensus 262 DG~IrvW~~~~ 272 (557)
||+||||++..
T Consensus 379 Dg~i~iW~~~~ 389 (393)
T 1erj_A 379 DCKARIWKYKK 389 (393)
T ss_dssp TSEEEEEEEEE
T ss_pred CCcEEECcccc
Confidence 99999999764
No 16
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=3.2e-34 Score=321.33 Aligned_cols=269 Identities=26% Similarity=0.371 Sum_probs=227.1
Q ss_pred cEEEEEeccCcccEEEEEEcCCC-c-EEEEECCCcEEEEcCCC---------------------CCCCCCCCEEEEEECC
Q psy7057 2 YKLSTALYGHSMDVRSLSVTPDG-C-ILSASRDKSAKLWKPND---------------------LSPGAKVNTLLSASWD 58 (557)
Q Consensus 2 ~kl~~~l~gH~~~V~~l~~spdg-~-l~sgs~Dg~V~iWd~~~---------------------~~~~~~~~~l~sgs~D 58 (557)
+++...|++|.+.|++|+|+|++ . |+|||.|++|++|++.. +++++++.+|++|+.|
T Consensus 372 l~~~~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~D 451 (694)
T 3dm0_A 372 LVLKGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWD 451 (694)
T ss_dssp SEEEEEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETT
T ss_pred cchhhhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCC
Confidence 46678899999999999999976 3 88999999999999753 5677889999999999
Q ss_pred CeEEEEECCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeCCCcEEEEE----eCCCCCEEEEEEeCCC--
Q psy7057 59 MTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSEEGEFLKTL----TGHTDCVRGLAVLNDT-- 131 (557)
Q Consensus 59 g~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~~~~~~~l----~~h~~~V~~l~~~~~~-- 131 (557)
++|++||+.++++...+.+|...|.+++|+|++ .|++|+.|++|++||..+.+...+ .+|...|.+++|+|++
T Consensus 452 g~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 531 (694)
T 3dm0_A 452 GELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQ 531 (694)
T ss_dssp SEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSS
T ss_pred CcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCc
Confidence 999999999999999999999999999999998 999999999999999776665554 3688999999999985
Q ss_pred -eEEEEECCCeEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCCceEe--eCCccEEEEEEc
Q psy7057 132 -DFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQNSFM--IPAMSVWAVAIL 206 (557)
Q Consensus 132 -~lvs~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~~~~~--~~~~~v~~v~~~ 206 (557)
.+++++.|++|++||++++++..++.+|...|+++++ ++++|++|+.|++|++||+.+.+.+. .+...|.+++|+
T Consensus 532 ~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~s 611 (694)
T 3dm0_A 532 PTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEANSVIHALCFS 611 (694)
T ss_dssp CEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCBCSSCEEEEEEC
T ss_pred ceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEecCCCcEEEEEEc
Confidence 4889999999999999999999999999999999999 67899999999999999988774332 244579999999
Q ss_pred CCCcEEEEEcCCcEEEEecCCCCcchhHH-----------------HhcccceeEEEeccCCCceeEEEEeCCCcEEEEe
Q psy7057 207 PNSDIVTGSSDGIVRVFSANPDRQAEDAV-----------------QAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFS 269 (557)
Q Consensus 207 p~g~l~sg~~Dg~I~iwd~~~~~~~~~~~-----------------~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~ 269 (557)
|++.+++++.++.|+|||+.+........ .......+..+.+.++.. .+++||.||+||||+
T Consensus 612 p~~~~l~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~-~l~sgs~Dg~i~iW~ 690 (694)
T 3dm0_A 612 PNRYWLCAATEHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGS-TLFSGYTDGVIRVWG 690 (694)
T ss_dssp SSSSEEEEEETTEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTSS-EEEEEETTSEEEEEE
T ss_pred CCCcEEEEEcCCCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCC-EEEEEcCCCeEEEEe
Confidence 99997777888889999998765432110 001111245666666554 689999999999999
Q ss_pred cC
Q psy7057 270 AN 271 (557)
Q Consensus 270 ~~ 271 (557)
+.
T Consensus 691 i~ 692 (694)
T 3dm0_A 691 IG 692 (694)
T ss_dssp C-
T ss_pred cc
Confidence 75
No 17
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=9.9e-34 Score=312.85 Aligned_cols=267 Identities=20% Similarity=0.237 Sum_probs=221.6
Q ss_pred EEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC------------------C---------------------
Q psy7057 4 LSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND------------------L--------------------- 43 (557)
Q Consensus 4 l~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~------------------~--------------------- 43 (557)
..+.|.+|.+.|++++|+|+|+ |++|+.|++|+|||+.+ +
T Consensus 51 ~~~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~ 130 (611)
T 1nr0_A 51 DTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGH 130 (611)
T ss_dssp CCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEE
T ss_pred cCeEecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCCceeE
Confidence 4567889999999999999998 88999999999999742 1
Q ss_pred -----------------------CCCCCCC-EEEEEECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEEC
Q psy7057 44 -----------------------SPGAKVN-TLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCA 98 (557)
Q Consensus 44 -----------------------~~~~~~~-~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~ 98 (557)
.++|++. .|++|+.|++|++||..++++..++.+|...|.+++|+|++ +|++|+.
T Consensus 131 v~~wd~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~ 210 (611)
T 1nr0_A 131 VFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGG 210 (611)
T ss_dssp EEETTTCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred EEEeeCCCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEEC
Confidence 1223333 69999999999999999999999999999999999999999 9999999
Q ss_pred CCeEEEEe-CCCcEEEEEe-------CCCCCEEEEEEeCCCe-EEEEECCCeEEEEECCCCeEEEE--------------
Q psy7057 99 DKTIKLHS-EEGEFLKTLT-------GHTDCVRGLAVLNDTD-FVSCSNDASIRVWDSTTGKCVHT-------------- 155 (557)
Q Consensus 99 dg~I~vwd-~~~~~~~~l~-------~h~~~V~~l~~~~~~~-lvs~s~Dg~I~vwd~~~~~~~~~-------------- 155 (557)
|++|++|| .+++++..+. +|...|.+++|+|++. |++++.|++|++||+++++++.+
T Consensus 211 D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~ 290 (611)
T 1nr0_A 211 DGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGI 290 (611)
T ss_dssp TSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEE
T ss_pred CCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEE
Confidence 99999999 6778888774 7999999999999976 77999999999999988766543
Q ss_pred -----------------------------EeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCCceEe----------
Q psy7057 156 -----------------------------MYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQNSFM---------- 194 (557)
Q Consensus 156 -----------------------------~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~~~~~---------- 194 (557)
+.+|...|.++++ ++++|++++.|++|++||+.+.....
T Consensus 291 ~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v 370 (611)
T 1nr0_A 291 IWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMI 370 (611)
T ss_dssp EECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCE
T ss_pred EEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeeecccCCcceE
Confidence 3578899999999 77899999999999999965431100
Q ss_pred ---------------------------------------------------------------------------eCCcc
Q psy7057 195 ---------------------------------------------------------------------------IPAMS 199 (557)
Q Consensus 195 ---------------------------------------------------------------------------~~~~~ 199 (557)
.+...
T Consensus 371 ~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~ 450 (611)
T 1nr0_A 371 TGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYN 450 (611)
T ss_dssp EEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSC
T ss_pred EEEEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeeecCCC
Confidence 01234
Q ss_pred EEEEEEcCCCc-EEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecCC
Q psy7057 200 VWAVAILPNSD-IVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANP 272 (557)
Q Consensus 200 v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~ 272 (557)
+.+++|+|+++ +++|+.|++|++|++.......... ..|...+..+.+.++.. .+++++.|++|++|++..
T Consensus 451 v~~va~spdg~~lasgs~D~~v~lwd~~~~~~~~~~~-~~h~~~v~~v~fspdg~-~las~s~d~~v~~w~~~~ 522 (611)
T 1nr0_A 451 SSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKT-IVHPAEITSVAFSNNGA-FLVATDQSRKVIPYSVAN 522 (611)
T ss_dssp EEEEEECTTSCEEEEEETTSEEEEEEEETTEEEEEEE-EECSSCEEEEEECTTSS-EEEEEETTSCEEEEEGGG
T ss_pred ceEEEEeCCCCEEEEeCCCCeEEEEEccCCceeeeec-cCCCCceEEEEECCCCC-EEEEEcCCCCEEEEEcCC
Confidence 67899999999 8899999999999997654322122 45778899999888765 589999999999999764
No 18
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=2.1e-33 Score=306.42 Aligned_cols=261 Identities=31% Similarity=0.479 Sum_probs=234.0
Q ss_pred EEEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC---------------CCCCCCCCEEEEEECCCeEEEEEC
Q psy7057 3 KLSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND---------------LSPGAKVNTLLSASWDMTAKLWCL 66 (557)
Q Consensus 3 kl~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~---------------~~~~~~~~~l~sgs~Dg~i~iwd~ 66 (557)
++.+.+.+|...|++++|+|++. |++++.|++|++||... +++++++..|++++.|+++++|+.
T Consensus 294 ~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~ 373 (577)
T 2ymu_A 294 QLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQHLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR 373 (577)
T ss_dssp CEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred cEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcC
Confidence 45678899999999999999998 88999999999999865 567888999999999999999995
Q ss_pred CCCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeCCCcEEEEEeCCCCCEEEEEEeCCCe-EEEEECCCeEEE
Q psy7057 67 ESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSEEGEFLKTLTGHTDCVRGLAVLNDTD-FVSCSNDASIRV 144 (557)
Q Consensus 67 ~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~~~~~~~l~~h~~~V~~l~~~~~~~-lvs~s~Dg~I~v 144 (557)
+++.+..+.+|...|.+++|+|++ .|++++.|+.|++||.+++.+..+.+|...|++++|+|++. +++++.|++|++
T Consensus 374 -~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~ 452 (577)
T 2ymu_A 374 -NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKL 452 (577)
T ss_dssp -TCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred -CCCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEE
Confidence 568888999999999999999998 89999999999999999999999999999999999999976 779999999999
Q ss_pred EECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC--ceEeeCCccEEEEEEcCCCc-EEEEEcCCc
Q psy7057 145 WDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ--NSFMIPAMSVWAVAILPNSD-IVTGSSDGI 219 (557)
Q Consensus 145 wd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~--~~~~~~~~~v~~v~~~p~g~-l~sg~~Dg~ 219 (557)
||. +++.+..+.+|...|.+++| ++++|++++.|++|++|+.... +.+..|...|++++|+|+++ |++++.|+.
T Consensus 453 w~~-~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~ 531 (577)
T 2ymu_A 453 WNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKT 531 (577)
T ss_dssp EET-TSCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEETTSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSE
T ss_pred EEC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCE
Confidence 995 67888999999999999999 7789999999999999996443 77888999999999999999 999999999
Q ss_pred EEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEe
Q psy7057 220 VRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFS 269 (557)
Q Consensus 220 I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~ 269 (557)
|++||... +.. ....+|...+..+.+.++.. .++|++.||+|++||
T Consensus 532 v~lwd~~~-~~~--~~~~~h~~~v~~~~fs~dg~-~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 532 VKLWNRNG-QLL--QTLTGHSSSVWGVAFSPDGQ-TIASASSDKTVKLWN 577 (577)
T ss_dssp EEEECTTS-CEE--EEEECCSSCEEEEEECTTSS-CEEEEETTSCEEEEC
T ss_pred EEEEeCCC-CEE--EEEcCCCCCEEEEEEcCCCC-EEEEEeCCCEEEEeC
Confidence 99999753 322 23456788899999887665 588999999999996
No 19
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.8e-33 Score=285.65 Aligned_cols=222 Identities=23% Similarity=0.385 Sum_probs=206.5
Q ss_pred EEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC----------------CCCCCCCCEEEEEECCCeEEEEEC
Q psy7057 4 LSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND----------------LSPGAKVNTLLSASWDMTAKLWCL 66 (557)
Q Consensus 4 l~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~Dg~i~iwd~ 66 (557)
+...+.+|...|.+++|++++. +++++.|++|++||+.+ +.++|++.+|++|+.|++|++|++
T Consensus 72 ~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~ 151 (321)
T 3ow8_A 72 LQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGV 151 (321)
T ss_dssp EEEEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEET
T ss_pred eeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEc
Confidence 4557899999999999999998 88999999999999876 567889999999999999999999
Q ss_pred CCCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeCCCe-EEEEECCCeEE
Q psy7057 67 ESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDTD-FVSCSNDASIR 143 (557)
Q Consensus 67 ~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~~~~-lvs~s~Dg~I~ 143 (557)
++++....+..|...|.+++|+|++ .|++|+.|+.|++|| .+++++..+.+|...|++++|+|++. |++++.|++|+
T Consensus 152 ~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~ 231 (321)
T 3ow8_A 152 ESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIK 231 (321)
T ss_dssp TTCSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEE
T ss_pred CCCceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEE
Confidence 9999999999999999999999998 999999999999999 56788899999999999999999976 77999999999
Q ss_pred EEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC---ceEeeCCccEEEEEEcCCCc-EEEEEcC
Q psy7057 144 VWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ---NSFMIPAMSVWAVAILPNSD-IVTGSSD 217 (557)
Q Consensus 144 vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~---~~~~~~~~~v~~v~~~p~g~-l~sg~~D 217 (557)
+||+++++++.++.+|...|.+++| ++.+|++++.|++|++||+++. ..+..|...|++++|+|++. |++++.|
T Consensus 232 iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d 311 (321)
T 3ow8_A 232 IYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDD 311 (321)
T ss_dssp EEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred EEECCCcceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECCCCCEEEEEeCC
Confidence 9999999999999999999999999 6789999999999999998766 56667889999999999998 9999999
Q ss_pred CcEEEEec
Q psy7057 218 GIVRVFSA 225 (557)
Q Consensus 218 g~I~iwd~ 225 (557)
++|++||.
T Consensus 312 ~~i~vwd~ 319 (321)
T 3ow8_A 312 QEIHIYDC 319 (321)
T ss_dssp CCEEEEEC
T ss_pred CeEEEEeC
Confidence 99999996
No 20
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=1.6e-33 Score=311.13 Aligned_cols=267 Identities=22% Similarity=0.267 Sum_probs=218.1
Q ss_pred cEEEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC-----------------------CCCCCCCCEEEEEEC
Q psy7057 2 YKLSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND-----------------------LSPGAKVNTLLSASW 57 (557)
Q Consensus 2 ~kl~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~-----------------------~~~~~~~~~l~sgs~ 57 (557)
+++.++|.+|.+.|++++|+|+|+ |++|+.|++|++||+.+ ++++|++.+|++++.
T Consensus 180 ~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~ 259 (611)
T 1nr0_A 180 FKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASA 259 (611)
T ss_dssp BEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEET
T ss_pred CeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeC
Confidence 467788999999999999999998 88999999999999642 456788999999999
Q ss_pred CCeEEEEECCCCeEEE-------------------------------------------EEcccCCcEEEEEEcCCC-EE
Q psy7057 58 DMTAKLWCLESQQCKL-------------------------------------------TIRQHEMAVWGVIQLANG-II 93 (557)
Q Consensus 58 Dg~i~iwd~~~~~~~~-------------------------------------------~l~~h~~~V~~l~~~~~~-~l 93 (557)
|++|++||+.+++++. .+.+|...|++++|+|++ .|
T Consensus 260 D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l 339 (611)
T 1nr0_A 260 DKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTL 339 (611)
T ss_dssp TSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEE
T ss_pred CCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEE
Confidence 9999999998876543 345799999999999998 99
Q ss_pred EEEECCCeEEEEeCC-CcEEEEE-e-------------------------------------------------------
Q psy7057 94 VTGCADKTIKLHSEE-GEFLKTL-T------------------------------------------------------- 116 (557)
Q Consensus 94 ~sgs~dg~I~vwd~~-~~~~~~l-~------------------------------------------------------- 116 (557)
++++.|++|++||.. +.+...+ .
T Consensus 340 ~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (611)
T 1nr0_A 340 FSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAV 419 (611)
T ss_dssp EEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEE
T ss_pred EEEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEE
Confidence 999999999999942 2221111 0
Q ss_pred --------------------------CCCCCEEEEEEeCCCe-EEEEECCCeEEEEECCCCeE--EEEEeCCCCcEEEEE
Q psy7057 117 --------------------------GHTDCVRGLAVLNDTD-FVSCSNDASIRVWDSTTGKC--VHTMYGHPNFIYSVA 167 (557)
Q Consensus 117 --------------------------~h~~~V~~l~~~~~~~-lvs~s~Dg~I~vwd~~~~~~--~~~~~~h~~~V~~l~ 167 (557)
.|...+.+++|+|+++ +++|+.|++|++||+.++.. +.. .+|...|.+++
T Consensus 420 s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~va~spdg~~lasgs~D~~v~lwd~~~~~~~~~~~-~~h~~~v~~v~ 498 (611)
T 1nr0_A 420 SADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKT-IVHPAEITSVA 498 (611)
T ss_dssp CTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEEEETTEEEEEEE-EECSSCEEEEE
T ss_pred eCCCcEEEEEeCceEEEEeCCceeeeecCCCceEEEEeCCCCEEEEeCCCCeEEEEEccCCceeeeec-cCCCCceEEEE
Confidence 1334578899999987 66999999999999887653 344 67999999999
Q ss_pred E--cCCEEEEEeCCCeEEEEECCC-Cc-----eEeeCCccEEEEEEcCCCc-EEEEEcCCcEEEEecCCCCcchhHHHhc
Q psy7057 168 A--HGDLITSGGEDQCVCVYQNKA-QN-----SFMIPAMSVWAVAILPNSD-IVTGSSDGIVRVFSANPDRQAEDAVQAQ 238 (557)
Q Consensus 168 ~--~~~~l~s~s~Dg~I~iwd~~~-~~-----~~~~~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~~~~~~~~~~ 238 (557)
| ++++|++++.|++|++|+... .. .+..|...|++++|+|+++ |++|+.|++|++|++.............
T Consensus 499 fspdg~~las~s~d~~v~~w~~~~~~~~~~~~~~~~H~~~V~~v~fspdg~~lasgs~D~~v~lW~~~~~~~~~~~~~~~ 578 (611)
T 1nr0_A 499 FSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGA 578 (611)
T ss_dssp ECTTSSEEEEEETTSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCTTSCCEEETTS
T ss_pred ECCCCCEEEEEcCCCCEEEEEcCCCCceeeeeeeeecccceeEEEECCCCCEEEEEECCCcEEEEECCCcccccchhhcc
Confidence 9 788999999999999999765 32 1233888999999999999 9999999999999998754322122345
Q ss_pred c-cceeEEEeccCCCceeEEEEeCCCcEEEEecC
Q psy7057 239 Y-AEEVKKLKSANEQEIGGVKVSDDGIVRVFSAN 271 (557)
Q Consensus 239 ~-~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~ 271 (557)
| ...+..+.+.++.. +++++.||+||+|++.
T Consensus 579 h~~~~v~~v~fs~d~~--l~s~~~D~~i~lW~~~ 610 (611)
T 1nr0_A 579 HAMSSVNSVIWLNETT--IVSAGQDSNIKFWNVP 610 (611)
T ss_dssp STTSCEEEEEEEETTE--EEEEETTSCEEEEECC
T ss_pred CcccCeeEEEEcCCCE--EEEecCCCCEEEEecc
Confidence 6 67888998887664 8999999999999973
No 21
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=8e-34 Score=291.29 Aligned_cols=220 Identities=19% Similarity=0.188 Sum_probs=192.1
Q ss_pred cCcccEEEEEEcCCCcEEEEECCCcEEEEcCCC--------------------CCCCCCCCEEEEEECCCeEEEEECCCC
Q psy7057 10 GHSMDVRSLSVTPDGCILSASRDKSAKLWKPND--------------------LSPGAKVNTLLSASWDMTAKLWCLESQ 69 (557)
Q Consensus 10 gH~~~V~~l~~spdg~l~sgs~Dg~V~iWd~~~--------------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~ 69 (557)
.|...|++++|+|++.|++|+.||+|+|||+.+ +++++++++|++|+.|++|++||+.++
T Consensus 80 ~~~~~v~~~~~s~d~~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~ 159 (344)
T 4gqb_B 80 QTEAGVADLTWVGERGILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQ 159 (344)
T ss_dssp EESSCEEEEEEETTTEEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT
T ss_pred ccCCCEEEEEEeCCCeEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCC
Confidence 356789999999999999999999999999865 567889999999999999999999999
Q ss_pred eEEEEEcccCCcEEEEEEcCCC--EEEEEECCCeEEEEe-CCCcEEEEEe--CCCCCEEEEEEeCC-Ce-EEEEECCCeE
Q psy7057 70 QCKLTIRQHEMAVWGVIQLANG--IIVTGCADKTIKLHS-EEGEFLKTLT--GHTDCVRGLAVLND-TD-FVSCSNDASI 142 (557)
Q Consensus 70 ~~~~~l~~h~~~V~~l~~~~~~--~l~sgs~dg~I~vwd-~~~~~~~~l~--~h~~~V~~l~~~~~-~~-lvs~s~Dg~I 142 (557)
+++.++.+|...|.+++|++++ +|++|+.|++|++|| .++++...+. .|...+.+++|+|+ +. |++|+.|++|
T Consensus 160 ~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v 239 (344)
T 4gqb_B 160 VVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTV 239 (344)
T ss_dssp EEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEE
T ss_pred cEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcE
Confidence 9999999999999999999976 789999999999999 4566666664 45667999999986 33 6799999999
Q ss_pred EEEECCCCeEEEEEeCCCCcEEEEEE--cC-CEEEEEeCCCeEEEEECCCC--ceEeeCCccEEEEEEcCCCc--EEEEE
Q psy7057 143 RVWDSTTGKCVHTMYGHPNFIYSVAA--HG-DLITSGGEDQCVCVYQNKAQ--NSFMIPAMSVWAVAILPNSD--IVTGS 215 (557)
Q Consensus 143 ~vwd~~~~~~~~~~~~h~~~V~~l~~--~~-~~l~s~s~Dg~I~iwd~~~~--~~~~~~~~~v~~v~~~p~g~--l~sg~ 215 (557)
++||+++++++.++.+|...|++++| ++ .+|++|+.|++|++||.... ..+..|...|++++|+|++. |++++
T Consensus 240 ~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~~~~H~~~V~~v~~sp~~~~llas~s 319 (344)
T 4gqb_B 240 SLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFRSQAHRDFVRDATWSPLNHSLLTTVG 319 (344)
T ss_dssp EEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEEEECCCSSCEEEEEECSSSTTEEEEEE
T ss_pred EEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEEEEcCCCCCEEEEEEeCCCCeEEEEEc
Confidence 99999999999999999999999999 44 47999999999999998766 55677899999999999987 56899
Q ss_pred cCCcEEEEecCCCC
Q psy7057 216 SDGIVRVFSANPDR 229 (557)
Q Consensus 216 ~Dg~I~iwd~~~~~ 229 (557)
.|++|++|++.+..
T Consensus 320 ~D~~v~~w~v~~~~ 333 (344)
T 4gqb_B 320 WDHQVVHHVVPTEP 333 (344)
T ss_dssp TTSCEEEEECCC--
T ss_pred CCCeEEEEECCCCC
Confidence 99999999997653
No 22
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=1.5e-33 Score=295.98 Aligned_cols=223 Identities=27% Similarity=0.420 Sum_probs=205.2
Q ss_pred EEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC----------------CCCCCCCCEEEEEECCCeEEEEEC
Q psy7057 4 LSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND----------------LSPGAKVNTLLSASWDMTAKLWCL 66 (557)
Q Consensus 4 l~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~Dg~i~iwd~ 66 (557)
+.+++.+|.+.|++++|+|++. |++|+.|++|++||+.+ +.+++++++|++|+.|++|++||+
T Consensus 142 ~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~ 221 (410)
T 1vyh_C 142 FERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEV 221 (410)
T ss_dssp CCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEET
T ss_pred EEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEEC
Confidence 4578999999999999999998 88999999999999876 567788999999999999999999
Q ss_pred CCCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeCC--------------
Q psy7057 67 ESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLND-------------- 130 (557)
Q Consensus 67 ~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~~-------------- 130 (557)
.++.++.++.+|...|.++.+++++ .|++|+.|++|++|| .++.+...+.+|...|.+++|+|+
T Consensus 222 ~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~ 301 (410)
T 1vyh_C 222 QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSET 301 (410)
T ss_dssp TTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-
T ss_pred CCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccc
Confidence 9999999999999999999999998 999999999999999 567788899999999999999985
Q ss_pred ------C-eEEEEECCCeEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC---ceEeeCCc
Q psy7057 131 ------T-DFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ---NSFMIPAM 198 (557)
Q Consensus 131 ------~-~lvs~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~---~~~~~~~~ 198 (557)
+ .+++|+.|++|++||+++++++.++.+|...|.+++| ++.+|++|+.|++|++||.... ..+..|..
T Consensus 302 ~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~ 381 (410)
T 1vyh_C 302 KKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEH 381 (410)
T ss_dssp ------CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSS
T ss_pred cccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCC
Confidence 2 3779999999999999999999999999999999999 6779999999999999997654 67788999
Q ss_pred cEEEEEEcCCCc-EEEEEcCCcEEEEecC
Q psy7057 199 SVWAVAILPNSD-IVTGSSDGIVRVFSAN 226 (557)
Q Consensus 199 ~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~ 226 (557)
.|++++|+|++. |++|+.|++|++|+++
T Consensus 382 ~v~~l~~~~~~~~l~sgs~D~~i~vW~~r 410 (410)
T 1vyh_C 382 FVTSLDFHKTAPYVVTGSVDQTVKVWECR 410 (410)
T ss_dssp CEEEEEECSSSSCEEEEETTSEEEEEC--
T ss_pred cEEEEEEcCCCCEEEEEeCCCcEEEEeCC
Confidence 999999999998 9999999999999863
No 23
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.1e-32 Score=272.30 Aligned_cols=269 Identities=25% Similarity=0.388 Sum_probs=232.3
Q ss_pred CcEEEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC----------------CCCCCCCCEEEEEECCCeEEE
Q psy7057 1 MYKLSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND----------------LSPGAKVNTLLSASWDMTAKL 63 (557)
Q Consensus 1 ~~kl~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~Dg~i~i 63 (557)
.+++.++|.+|.+.|++++| |++. |++|+.||.|++||+.+ +.+++++.+|++++.|+.+++
T Consensus 7 ~~~~~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~ 85 (313)
T 3odt_A 7 GYQLSATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMING 85 (313)
T ss_dssp CCEEEEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEE
T ss_pred cHHHHHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEE
Confidence 36889999999999999999 7776 99999999999999876 677889999999999999999
Q ss_pred EECCCC---eEEEEEcccCCcEEEEEEcCCCEEEEEECCCeEEEEeCCCcEEEEEeCCCCCEEEEEEeC-C-CeEEEEEC
Q psy7057 64 WCLESQ---QCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHSEEGEFLKTLTGHTDCVRGLAVLN-D-TDFVSCSN 138 (557)
Q Consensus 64 wd~~~~---~~~~~l~~h~~~V~~l~~~~~~~l~sgs~dg~I~vwd~~~~~~~~l~~h~~~V~~l~~~~-~-~~lvs~s~ 138 (557)
|++... +.+..+.+|...|.++.| ..+.+++++.|+.|++|| .+..+..+..|...|.+++++| + ..+++++.
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~l~~~~~d~~i~~~d-~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~ 163 (313)
T 3odt_A 86 VPLFATSGEDPLYTLIGHQGNVCSLSF-QDGVVISGSWDKTAKVWK-EGSLVYNLQAHNASVWDAKVVSFSENKFLTASA 163 (313)
T ss_dssp EETTCCTTSCC-CEECCCSSCEEEEEE-ETTEEEEEETTSEEEEEE-TTEEEEEEECCSSCEEEEEEEETTTTEEEEEET
T ss_pred EEeeecCCCCcccchhhcccCEEEEEe-cCCEEEEEeCCCCEEEEc-CCcEEEecccCCCceeEEEEccCCCCEEEEEEC
Confidence 998664 567888999999999999 345999999999999999 7788889999999999999987 4 45889999
Q ss_pred CCeEEEEECCCCeEEEEEeC-CCCcEEEEEE-cCCEEEEEeCCCeEEEEECCCC---ceEeeCCccEEEEEEcCCCcEEE
Q psy7057 139 DASIRVWDSTTGKCVHTMYG-HPNFIYSVAA-HGDLITSGGEDQCVCVYQNKAQ---NSFMIPAMSVWAVAILPNSDIVT 213 (557)
Q Consensus 139 Dg~I~vwd~~~~~~~~~~~~-h~~~V~~l~~-~~~~l~s~s~Dg~I~iwd~~~~---~~~~~~~~~v~~v~~~p~g~l~s 213 (557)
|+.|++|| ..+.+..+.. |...+.++++ ....+++++.|+.|++||+++. ..+..|...|.+++|+|++.+++
T Consensus 164 d~~i~i~d--~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~ 241 (313)
T 3odt_A 164 DKTIKLWQ--NDKVIKTFSGIHNDVVRHLAVVDDGHFISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNGDIVS 241 (313)
T ss_dssp TSCEEEEE--TTEEEEEECSSCSSCEEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSCEEE
T ss_pred CCCEEEEe--cCceEEEEeccCcccEEEEEEcCCCeEEEccCCCeEEEEECCchhhhhhhhcCCceEEEEEEecCCCEEE
Confidence 99999999 6778888887 8999999999 3335999999999999998765 56677889999999999999999
Q ss_pred EEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecCCChhhHH
Q psy7057 214 GSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPDRQAED 278 (557)
Q Consensus 214 g~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~~~~~~~ 278 (557)
++.||.|++|++.+.+.... ...+...+..+.+.+... +++++.||.|++|++..++....
T Consensus 242 ~~~dg~v~iwd~~~~~~~~~--~~~~~~~i~~~~~~~~~~--~~~~~~dg~i~iw~~~~~~~~~~ 302 (313)
T 3odt_A 242 CGEDRTVRIWSKENGSLKQV--ITLPAISIWSVDCMSNGD--IIVGSSDNLVRIFSQEKSRWASE 302 (313)
T ss_dssp EETTSEEEEECTTTCCEEEE--EECSSSCEEEEEECTTSC--EEEEETTSCEEEEESCGGGCCC-
T ss_pred EecCCEEEEEECCCCceeEE--EeccCceEEEEEEccCCC--EEEEeCCCcEEEEeCCCCceeeh
Confidence 99999999999988765432 234566788888887765 67899999999999998766543
No 24
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=1.1e-32 Score=285.45 Aligned_cols=266 Identities=14% Similarity=0.152 Sum_probs=219.9
Q ss_pred cEEEEEeccCcccEEEEEEcCCC-c-EEEEECCCcEEEEcCCC------------------CCCCC-CCCEEEEEECCCe
Q psy7057 2 YKLSTALYGHSMDVRSLSVTPDG-C-ILSASRDKSAKLWKPND------------------LSPGA-KVNTLLSASWDMT 60 (557)
Q Consensus 2 ~kl~~~l~gH~~~V~~l~~spdg-~-l~sgs~Dg~V~iWd~~~------------------~~~~~-~~~~l~sgs~Dg~ 60 (557)
+++.+.+.+|.+.|++++|+|++ + |++|+.||+|++||+.+ +.+++ ++.+|++++.|++
T Consensus 63 ~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~ 142 (383)
T 3ei3_B 63 YKLHRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGA 142 (383)
T ss_dssp CEEEEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTE
T ss_pred cceEEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCE
Confidence 67888999999999999999998 5 88999999999999975 45666 5789999999999
Q ss_pred EEEEECCCCeEEEEEccc---CCcEEEEEEcCCC-EEEEEECCCeEEEEeCCCcEEEEEeCCCCCEEEEEEeCCCe--EE
Q psy7057 61 AKLWCLESQQCKLTIRQH---EMAVWGVIQLANG-IIVTGCADKTIKLHSEEGEFLKTLTGHTDCVRGLAVLNDTD--FV 134 (557)
Q Consensus 61 i~iwd~~~~~~~~~l~~h---~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~~~~~~~l~~h~~~V~~l~~~~~~~--lv 134 (557)
|++||+.+ ..+..+..| ...|.+++|+|++ .|++|+.|+.|++||.+++++..+.+|...|.+++|+|++. ++
T Consensus 143 i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~ 221 (383)
T 3ei3_B 143 TTLRDFSG-SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLDGHEIFKEKLHKAKVTHAEFNPRCDWLMA 221 (383)
T ss_dssp EEEEETTS-CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETTSCEEEEEECSSSCEEEEEECSSCTTEEE
T ss_pred EEEEECCC-CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECCCCEEEEeccCCCcEEEEEECCCCCCEEE
Confidence 99999986 555566544 4889999999988 99999999999999999999999999999999999999975 77
Q ss_pred EEECCCeEEEEECCC----CeEEEEEeCCCCcEEEEEEc---CCEEEEEeCCCeEEEEECCCC---ceEeeCC-------
Q psy7057 135 SCSNDASIRVWDSTT----GKCVHTMYGHPNFIYSVAAH---GDLITSGGEDQCVCVYQNKAQ---NSFMIPA------- 197 (557)
Q Consensus 135 s~s~Dg~I~vwd~~~----~~~~~~~~~h~~~V~~l~~~---~~~l~s~s~Dg~I~iwd~~~~---~~~~~~~------- 197 (557)
+++.|++|++||+++ +.++..+ +|...|.+++|+ +.+|++++.|+.|++||+++. ..+..|.
T Consensus 222 s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~ 300 (383)
T 3ei3_B 222 TSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHL 300 (383)
T ss_dssp EEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCCTTS
T ss_pred EEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccccccccccccccc
Confidence 999999999999987 6677777 699999999994 579999999999999997654 4444332
Q ss_pred ----------ccEEEEEEcCCCcEEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEE
Q psy7057 198 ----------MSVWAVAILPNSDIVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRV 267 (557)
Q Consensus 198 ----------~~v~~v~~~p~g~l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~Irv 267 (557)
..+..++++|++++ +++.|+.|++||+.+++.........+...+..+.+.+... .+++++ ||.|+|
T Consensus 301 ~~~~~~~~p~~~~~~~~~s~dg~~-s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~-~l~s~s-d~~i~i 377 (383)
T 3ei3_B 301 TPIKATWHPMYDLIVAGRYPDDQL-LLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSPTGD-VLASGM-GFNILI 377 (383)
T ss_dssp CCCCCEECSSSSEEEEECBCCTTT-CTTCCCCEEEEETTTCCEEEEECBTTBCSCCCEEEECTTSS-EEEEEE-TTEEEE
T ss_pred cceEEeccCCCCceEEEecCCccc-ccCCCCeEEEEecCCCceeeeecCCCCCceEEEEEEecCcc-EEEEec-CCcEEE
Confidence 34455777777777 77899999999998877654333233455566667766655 467776 999999
Q ss_pred EecCC
Q psy7057 268 FSANP 272 (557)
Q Consensus 268 W~~~~ 272 (557)
|+++.
T Consensus 378 w~~~~ 382 (383)
T 3ei3_B 378 WNRED 382 (383)
T ss_dssp EECC-
T ss_pred EecCC
Confidence 99874
No 25
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=7.4e-32 Score=294.22 Aligned_cols=263 Identities=32% Similarity=0.520 Sum_probs=233.7
Q ss_pred EEEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC---------------CCCCCCCCEEEEEECCCeEEEEEC
Q psy7057 3 KLSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND---------------LSPGAKVNTLLSASWDMTAKLWCL 66 (557)
Q Consensus 3 kl~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~---------------~~~~~~~~~l~sgs~Dg~i~iwd~ 66 (557)
++...+.+|...|++++|+|+++ |++++.|++|++|+... +++++++..|++++.|++|++|++
T Consensus 253 ~~~~~~~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~ 332 (577)
T 2ymu_A 253 QLLQTLTGHSSSVNGVAFRPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR 332 (577)
T ss_dssp CEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred CEEEEEecCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeCCCcEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeC
Confidence 46778999999999999999998 88999999999999764 567888999999999999999997
Q ss_pred CCCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeCCCcEEEEEeCCCCCEEEEEEeCCCe-EEEEECCCeEEE
Q psy7057 67 ESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSEEGEFLKTLTGHTDCVRGLAVLNDTD-FVSCSNDASIRV 144 (557)
Q Consensus 67 ~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~~~~~~~l~~h~~~V~~l~~~~~~~-lvs~s~Dg~I~v 144 (557)
.. ..+..+.+|...|.+++|+|++ .+++|+.|+.|++|+.+++.+..+.+|...|++++|+|++. |++++.|+.|++
T Consensus 333 ~~-~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~ 411 (577)
T 2ymu_A 333 NG-QHLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKL 411 (577)
T ss_dssp TS-CEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEE
T ss_pred CC-CeeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcCCCCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEE
Confidence 65 5667889999999999999998 99999999999999999999999999999999999999977 779999999999
Q ss_pred EECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC--ceEeeCCccEEEEEEcCCCc-EEEEEcCCc
Q psy7057 145 WDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ--NSFMIPAMSVWAVAILPNSD-IVTGSSDGI 219 (557)
Q Consensus 145 wd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~--~~~~~~~~~v~~v~~~p~g~-l~sg~~Dg~ 219 (557)
|| .+++.+..+.+|...|.++++ ++++|++++.|++|++|+.... ..+..|...|++++|+|+++ |++++.|++
T Consensus 412 ~~-~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~ 490 (577)
T 2ymu_A 412 WN-RNGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKT 490 (577)
T ss_dssp EC-TTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCEEEEEECCSSCEEEEEECTTSCEEEEEETTSE
T ss_pred Ee-CCCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEECCCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCE
Confidence 99 468889999999999999999 6779999999999999996544 67788999999999999999 889999999
Q ss_pred EEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecC
Q psy7057 220 VRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSAN 271 (557)
Q Consensus 220 I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~ 271 (557)
|++|+.... .. .....|...+..+.+.++.. .+++++.||.|+||+..
T Consensus 491 i~iw~~~~~-~~--~~~~~h~~~v~~l~~s~dg~-~l~s~~~dg~v~lwd~~ 538 (577)
T 2ymu_A 491 VKLWNRNGQ-LL--QTLTGHSSSVRGVAFSPDGQ-TIASASDDKTVKLWNRN 538 (577)
T ss_dssp EEEEETTSC-EE--EEEECCSSCEEEEEECTTSS-CEEEEETTSEEEEECTT
T ss_pred EEEEcCCCC-EE--EEEeCCCCCEEEEEEcCCCC-EEEEEECcCEEEEEeCC
Confidence 999996533 22 23346778899998887655 58999999999999964
No 26
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=1.6e-33 Score=287.76 Aligned_cols=269 Identities=14% Similarity=0.202 Sum_probs=222.4
Q ss_pred cEEEEE-eccCcccEEEEEEcCC---Cc--EEEEECCCcEEEEcCCC---------------------CCCCCC----CC
Q psy7057 2 YKLSTA-LYGHSMDVRSLSVTPD---GC--ILSASRDKSAKLWKPND---------------------LSPGAK----VN 50 (557)
Q Consensus 2 ~kl~~~-l~gH~~~V~~l~~spd---g~--l~sgs~Dg~V~iWd~~~---------------------~~~~~~----~~ 50 (557)
|+.... +.+|.+.|++++|+|+ +. +++++.++.|++|++.+ ++++++ +.
T Consensus 7 ~~~~~~~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 86 (366)
T 3k26_A 7 FKCVNSLKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHP 86 (366)
T ss_dssp CEEEEEEECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCE
T ss_pred EEEEEEeecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCC
Confidence 444334 4589999999999984 43 77888888999999875 335555 56
Q ss_pred EEEEEECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcC-CC-EEEEEECCCeEEEEeC-CCcEEEEE---eCCCCCEEE
Q psy7057 51 TLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLA-NG-IIVTGCADKTIKLHSE-EGEFLKTL---TGHTDCVRG 124 (557)
Q Consensus 51 ~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~-~~-~l~sgs~dg~I~vwd~-~~~~~~~l---~~h~~~V~~ 124 (557)
+|++|+.|++|++||+.+++.+..+.+|...|.+++|+| ++ .|++|+.|+.|++||. +++.+..+ .+|...|.+
T Consensus 87 ~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~ 166 (366)
T 3k26_A 87 LLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLS 166 (366)
T ss_dssp EEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEE
T ss_pred EEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeE
Confidence 899999999999999999999999999999999999999 66 9999999999999994 56777777 689999999
Q ss_pred EEEeCCCe-EEEEECCCeEEEEECCCCeEEEEE----------------------------eCCCCcEEEEEEcCCEEEE
Q psy7057 125 LAVLNDTD-FVSCSNDASIRVWDSTTGKCVHTM----------------------------YGHPNFIYSVAAHGDLITS 175 (557)
Q Consensus 125 l~~~~~~~-lvs~s~Dg~I~vwd~~~~~~~~~~----------------------------~~h~~~V~~l~~~~~~l~s 175 (557)
++|+|++. |++++.|+.|++||+++++.+..+ ..|...|.++++++++|++
T Consensus 167 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~ 246 (366)
T 3k26_A 167 ADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWLGDLILS 246 (366)
T ss_dssp EEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEETTEEEE
T ss_pred EEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEcCCEEEE
Confidence 99999976 779999999999999876544333 3499999999999999999
Q ss_pred EeCCCeEEEEECCCC-----------------ceEeeCCccEEEEEEcCC--Cc-EEEEEcCCcEEEEecCCCCcch--h
Q psy7057 176 GGEDQCVCVYQNKAQ-----------------NSFMIPAMSVWAVAILPN--SD-IVTGSSDGIVRVFSANPDRQAE--D 233 (557)
Q Consensus 176 ~s~Dg~I~iwd~~~~-----------------~~~~~~~~~v~~v~~~p~--g~-l~sg~~Dg~I~iwd~~~~~~~~--~ 233 (557)
++.|+.|++||++.. ..+..|...|++++|+|+ +. |++++.||.|++|++..++... .
T Consensus 247 ~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~ 326 (366)
T 3k26_A 247 KSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKC 326 (366)
T ss_dssp ECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGGCEE
T ss_pred EecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCccccc
Confidence 999999999996542 344567778999999999 87 8899999999999998876432 1
Q ss_pred HHHhcc--cceeEEEeccCCCceeEEEEeCCCcEEEEecC
Q psy7057 234 AVQAQY--AEEVKKLKSANEQEIGGVKVSDDGIVRVFSAN 271 (557)
Q Consensus 234 ~~~~~~--~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~ 271 (557)
.....+ ...+..+.+.+... .+++++.||.|++|++.
T Consensus 327 ~~~~~~~~~~~v~~~~~s~~~~-~l~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 327 TTLTHHKCGAAIRQTSFSRDSS-ILIAVCDDASIWRWDRL 365 (366)
T ss_dssp EEECCTTCCSCEEEEEECTTSS-EEEEEETTSEEEEEEC-
T ss_pred eEEcccccCCceEEEEeCCCCC-eEEEEeCCCEEEEEEec
Confidence 122233 57888898887554 58999999999999975
No 27
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=1.6e-31 Score=269.80 Aligned_cols=258 Identities=16% Similarity=0.246 Sum_probs=224.4
Q ss_pred EeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC---------------------CCCCCCCCEEEEEECCCeEEEE
Q psy7057 7 ALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND---------------------LSPGAKVNTLLSASWDMTAKLW 64 (557)
Q Consensus 7 ~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~---------------------~~~~~~~~~l~sgs~Dg~i~iw 64 (557)
.+.+|.+.|++++|+|+++ |++++ ||.|++|++.. +.+++++++|++++.|+.|++|
T Consensus 46 ~~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~ 124 (337)
T 1gxr_A 46 NTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIW 124 (337)
T ss_dssp EEECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEE
T ss_pred eeccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEE
Confidence 3447999999999999998 66666 99999999864 4567789999999999999999
Q ss_pred ECCCCe--EEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeCCCe-EEEEECC
Q psy7057 65 CLESQQ--CKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDTD-FVSCSND 139 (557)
Q Consensus 65 d~~~~~--~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~~~~-lvs~s~D 139 (557)
++.+++ ....+..|...|.+++|+|++ .+++++.|+.|++|| .+++.+..+..|...|.+++|+|++. +++++.|
T Consensus 125 d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d 204 (337)
T 1gxr_A 125 DLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLD 204 (337)
T ss_dssp ECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred ECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecC
Confidence 999887 667788899999999999988 999999999999999 46677888999999999999999975 7799999
Q ss_pred CeEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC--ceEeeCCccEEEEEEcCCCc-EEEE
Q psy7057 140 ASIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ--NSFMIPAMSVWAVAILPNSD-IVTG 214 (557)
Q Consensus 140 g~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~--~~~~~~~~~v~~v~~~p~g~-l~sg 214 (557)
+.|++||+++++.+..+. |...+.++++ +++.|++++.++.|++|++... ..+..|...|.+++|+|+++ ++++
T Consensus 205 g~i~~~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 283 (337)
T 1gxr_A 205 NTVRSWDLREGRQLQQHD-FTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVST 283 (337)
T ss_dssp SEEEEEETTTTEEEEEEE-CSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred CcEEEEECCCCceEeeec-CCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeEEEcCCccceeEEEECCCCCEEEEe
Confidence 999999999999888875 7888999999 6789999999999999998766 55667888999999999998 8899
Q ss_pred EcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEec
Q psy7057 215 SSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSA 270 (557)
Q Consensus 215 ~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~ 270 (557)
+.||.|++|++.+++... ...+...+..+.+.+... .+++++.||.|++|++
T Consensus 284 ~~dg~i~~~~~~~~~~~~---~~~~~~~v~~~~~s~~~~-~l~~~~~dg~i~iw~~ 335 (337)
T 1gxr_A 284 GKDNLLNAWRTPYGASIF---QSKESSSVLSCDISVDDK-YIVTGSGDKKATVYEV 335 (337)
T ss_dssp ETTSEEEEEETTTCCEEE---EEECSSCEEEEEECTTSC-EEEEEETTSCEEEEEE
T ss_pred cCCCcEEEEECCCCeEEE---EecCCCcEEEEEECCCCC-EEEEecCCCeEEEEEE
Confidence 999999999998876552 223566788888777654 5889999999999986
No 28
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-31 Score=273.39 Aligned_cols=269 Identities=15% Similarity=0.179 Sum_probs=231.6
Q ss_pred EEEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC----------------CCCCCCCCEEEEEECCCeEEEEE
Q psy7057 3 KLSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND----------------LSPGAKVNTLLSASWDMTAKLWC 65 (557)
Q Consensus 3 kl~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~Dg~i~iwd 65 (557)
.....|.+|.+.|++++|+|+++ |++++.||.|++||+.+ +.+++++++|++++.|++|++||
T Consensus 23 ~~~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd 102 (369)
T 3zwl_B 23 MKAIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWD 102 (369)
T ss_dssp EEEEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEE
T ss_pred cccEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEE
Confidence 44577999999999999999998 88999999999999876 67788899999999999999999
Q ss_pred CCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEECC-----CeEEEEeCCC------------cEEEEEeCCCC--CEEEE
Q psy7057 66 LESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCAD-----KTIKLHSEEG------------EFLKTLTGHTD--CVRGL 125 (557)
Q Consensus 66 ~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~d-----g~I~vwd~~~------------~~~~~l~~h~~--~V~~l 125 (557)
+.+++++..+. |...|.+++|+|++ .+++++.+ +.|++||... ..+..+..|.. .+.++
T Consensus 103 ~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (369)
T 3zwl_B 103 VSNGQCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVA 181 (369)
T ss_dssp TTTCCEEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEE
T ss_pred CCCCcEEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEE
Confidence 99999988888 88999999999998 89999998 9999999321 23455666776 99999
Q ss_pred EEeCCCe-EEEEECCCeEEEEECCC-CeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC--ceEeeCCcc
Q psy7057 126 AVLNDTD-FVSCSNDASIRVWDSTT-GKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ--NSFMIPAMS 199 (557)
Q Consensus 126 ~~~~~~~-lvs~s~Dg~I~vwd~~~-~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~--~~~~~~~~~ 199 (557)
+|+|++. +++++.|+.|++||+++ ++.+..+..|...|.+++| ++.+|++++.|+.|++||+.+. .....+...
T Consensus 182 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~ 261 (369)
T 3zwl_B 182 GWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYETDCP 261 (369)
T ss_dssp EECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSC
T ss_pred EEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeecCCCC
Confidence 9999976 77999999999999998 7899999999999999999 6789999999999999998766 222336778
Q ss_pred EEEEEEcCCCc-EEEEEcCC--------------cEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCc
Q psy7057 200 VWAVAILPNSD-IVTGSSDG--------------IVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGI 264 (557)
Q Consensus 200 v~~v~~~p~g~-l~sg~~Dg--------------~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~ 264 (557)
+.+++|+|++. +++++.++ .+++|+..+.+... ....+...+..+.+.+... .+++++.||.
T Consensus 262 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~--~~~~~~~~v~~~~~s~~~~-~l~s~~~dg~ 338 (369)
T 3zwl_B 262 LNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIG--RVQGHFGPLNTVAISPQGT-SYASGGEDGF 338 (369)
T ss_dssp EEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEE--EEECCSSCEEEEEECTTSS-EEEEEETTSE
T ss_pred ceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchh--heecccCcEEEEEECCCCC-EEEEEcCCCe
Confidence 99999999999 88888888 89999998876543 2345677888898887554 6899999999
Q ss_pred EEEEecCCChh
Q psy7057 265 VRVFSANPDRQ 275 (557)
Q Consensus 265 IrvW~~~~~~~ 275 (557)
|+||++..+..
T Consensus 339 v~iw~~~~~~~ 349 (369)
T 3zwl_B 339 IRLHHFEKSYF 349 (369)
T ss_dssp EEEEEECHHHH
T ss_pred EEEEECccccc
Confidence 99999987643
No 29
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=9.2e-33 Score=286.52 Aligned_cols=270 Identities=14% Similarity=0.135 Sum_probs=227.6
Q ss_pred EEEEEeccCcccEEEEEEcCCCcEEEEECCCcEEEEcCCC----------------------CCCCCC----C---CEEE
Q psy7057 3 KLSTALYGHSMDVRSLSVTPDGCILSASRDKSAKLWKPND----------------------LSPGAK----V---NTLL 53 (557)
Q Consensus 3 kl~~~l~gH~~~V~~l~~spdg~l~sgs~Dg~V~iWd~~~----------------------~~~~~~----~---~~l~ 53 (557)
++.+.|.+|.+.|++++|+| ..|++|+.||+|++|++.. +.++++ + .+|+
T Consensus 7 ~~~~~~~~h~~~i~~~~~~~-~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~ 85 (397)
T 1sq9_A 7 ATANAGKAHDADIFSVSACN-SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVA 85 (397)
T ss_dssp EEEEESSCSSSCEEEEEECS-SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEE
T ss_pred hhhhhhhhhhcCeEEEEecC-CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEE
Confidence 56778899999999999999 5699999999999999865 455666 8 8999
Q ss_pred EEECCCeEEEEECCCCeE-----EEEEccc-----CCcEEEEEEc----CCC-E-EEEEECCCeEEEEeCC-------Cc
Q psy7057 54 SASWDMTAKLWCLESQQC-----KLTIRQH-----EMAVWGVIQL----ANG-I-IVTGCADKTIKLHSEE-------GE 110 (557)
Q Consensus 54 sgs~Dg~i~iwd~~~~~~-----~~~l~~h-----~~~V~~l~~~----~~~-~-l~sgs~dg~I~vwd~~-------~~ 110 (557)
+++.|+.|++|++.+++. ...+..| ...|.+++|+ |++ . |++++.|+.|++||.. +.
T Consensus 86 s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 165 (397)
T 1sq9_A 86 TTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSL 165 (397)
T ss_dssp EEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHT
T ss_pred EEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccc
Confidence 999999999999988876 8889888 5999999999 888 7 9999999999999943 34
Q ss_pred EEE-----EE-------eCCCCCEEEEEEeCCCeEEEEECCCeEEEEECCCCeEEEEEeC---C---CCcEEEEEE--cC
Q psy7057 111 FLK-----TL-------TGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMYG---H---PNFIYSVAA--HG 170 (557)
Q Consensus 111 ~~~-----~l-------~~h~~~V~~l~~~~~~~lvs~s~Dg~I~vwd~~~~~~~~~~~~---h---~~~V~~l~~--~~ 170 (557)
.+. .+ ..|...|.+++|+|++.+++++.|+.|++||+++++++..+.. | ...|.+++| ++
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~ 245 (397)
T 1sq9_A 166 TLNWSPTLELQGTVESPMTPSQFATSVDISERGLIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQG 245 (397)
T ss_dssp TTCCCCEEEEEEEECCSSSSCCCCCEEEECTTSEEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSST
T ss_pred eeeccCcceeeeeeccccCCCCCceEEEECCCceEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCC
Confidence 444 66 4488999999999988666999999999999999999999998 9 999999999 67
Q ss_pred CEEEEEeCC---CeEEEEECCCC---ceEee-------------CCccEEEEEEcCCCc-EEEEEcCCcEEEEecCCCCc
Q psy7057 171 DLITSGGED---QCVCVYQNKAQ---NSFMI-------------PAMSVWAVAILPNSD-IVTGSSDGIVRVFSANPDRQ 230 (557)
Q Consensus 171 ~~l~s~s~D---g~I~iwd~~~~---~~~~~-------------~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~~ 230 (557)
.+|++++.| +.|++||+++. ..+.. |...|.+++|+|++. |++++.||.|++|++.+.+.
T Consensus 246 ~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~ 325 (397)
T 1sq9_A 246 SLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKER 325 (397)
T ss_dssp TEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEE
T ss_pred CEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCce
Confidence 899999999 99999998765 45556 788999999999998 88999999999999988765
Q ss_pred chhHHH----hcc---------------cceeEEEeccCCCc---------eeEEEEeCCCcEEEEecCCC
Q psy7057 231 AEDAVQ----AQY---------------AEEVKKLKSANEQE---------IGGVKVSDDGIVRVFSANPD 273 (557)
Q Consensus 231 ~~~~~~----~~~---------------~~~v~~l~~~~~~~---------~~~vs~s~DG~IrvW~~~~~ 273 (557)
...... ..+ ...+..+.+.+... ..+++++.||.|++|++..+
T Consensus 326 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g 396 (397)
T 1sq9_A 326 ITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAGG 396 (397)
T ss_dssp EEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC-
T ss_pred eEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcCCC
Confidence 433220 033 67788998887752 57899999999999998764
No 30
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=4.5e-32 Score=278.27 Aligned_cols=267 Identities=14% Similarity=0.173 Sum_probs=223.3
Q ss_pred EeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC------------------CCCCCCCCEEEEEECCCeEEEEECC
Q psy7057 7 ALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND------------------LSPGAKVNTLLSASWDMTAKLWCLE 67 (557)
Q Consensus 7 ~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~------------------~~~~~~~~~l~sgs~Dg~i~iwd~~ 67 (557)
.+..|.++|++++|+|+++ |++++.|+.|++||+.+ +.+++++.+|++++.|+.|++||+.
T Consensus 3 ~~~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~ 82 (372)
T 1k8k_C 3 YHSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLK 82 (372)
T ss_dssp EEESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEE
T ss_pred eecccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECC
Confidence 3566999999999999998 88999999999999765 5677889999999999999999999
Q ss_pred CCeEEEE--EcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeCC-Cc---EE-EEEeCCCCCEEEEEEeCCCe-EEEEEC
Q psy7057 68 SQQCKLT--IRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSEE-GE---FL-KTLTGHTDCVRGLAVLNDTD-FVSCSN 138 (557)
Q Consensus 68 ~~~~~~~--l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~-~~---~~-~~l~~h~~~V~~l~~~~~~~-lvs~s~ 138 (557)
+++.... +..|...|.+++|+|++ .|++++.|+.|++||.. +. .. ....+|...|.+++|+|++. |++++.
T Consensus 83 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~ 162 (372)
T 1k8k_C 83 GRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSC 162 (372)
T ss_dssp TTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEET
T ss_pred CCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcC
Confidence 8875544 46799999999999988 99999999999999933 22 23 33367899999999999976 779999
Q ss_pred CCeEEEEEC------------------CCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC---ceEee
Q psy7057 139 DASIRVWDS------------------TTGKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ---NSFMI 195 (557)
Q Consensus 139 Dg~I~vwd~------------------~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~---~~~~~ 195 (557)
|+.|++||+ ..++++..+..|...|.++++ ++.+|++++.|+.|++||+++. ..+..
T Consensus 163 dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~ 242 (372)
T 1k8k_C 163 DFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLAS 242 (372)
T ss_dssp TSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEEC
T ss_pred CCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEcc
Confidence 999999995 467899999999999999999 6779999999999999997655 56677
Q ss_pred CCccEEEEEEcCCCcEEEEEcCCcEEEEecCC--CCc-------------------ch------------------hHHH
Q psy7057 196 PAMSVWAVAILPNSDIVTGSSDGIVRVFSANP--DRQ-------------------AE------------------DAVQ 236 (557)
Q Consensus 196 ~~~~v~~v~~~p~g~l~sg~~Dg~I~iwd~~~--~~~-------------------~~------------------~~~~ 236 (557)
|...|.+++|+|++.+++++.|+.|++|++.. +.. .. ....
T Consensus 243 ~~~~v~~~~~~~~~~~l~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (372)
T 1k8k_C 243 ETLPLLAVTFITESSLVAAGHDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLD 322 (372)
T ss_dssp SSCCEEEEEEEETTEEEEEETTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------CCCS
T ss_pred CCCCeEEEEEecCCCEEEEEeCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccccCcccccccc
Confidence 88899999999999966666999999999977 310 00 0111
Q ss_pred hcccceeEEEeccCCCc---eeEEEEeCCCcEEEEecCCC
Q psy7057 237 AQYAEEVKKLKSANEQE---IGGVKVSDDGIVRVFSANPD 273 (557)
Q Consensus 237 ~~~~~~v~~l~~~~~~~---~~~vs~s~DG~IrvW~~~~~ 273 (557)
..|...+..+.+.+.+. ..+++++.||.|++|++...
T Consensus 323 ~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~~~ 362 (372)
T 1k8k_C 323 SLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSL 362 (372)
T ss_dssp SSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHHH
T ss_pred ccccCCcceeEEecCCCcceeeEEEecCCCceEEEEecCh
Confidence 36778899998776665 67999999999999997643
No 31
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=2e-31 Score=272.41 Aligned_cols=221 Identities=22% Similarity=0.277 Sum_probs=197.8
Q ss_pred EEEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC--------------------CCCCCCCCEEEEEECCCeE
Q psy7057 3 KLSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND--------------------LSPGAKVNTLLSASWDMTA 61 (557)
Q Consensus 3 kl~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~--------------------~~~~~~~~~l~sgs~Dg~i 61 (557)
+....+..|...|.+++|+|++. |++|+.|+.|++|++.. +.+.+ ...+++++.|++|
T Consensus 88 ~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~l~s~s~d~~i 166 (340)
T 1got_B 88 NKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLD-DNQIVTSSGDTTC 166 (340)
T ss_dssp CEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEE-TTEEEEEETTSCE
T ss_pred CcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCccEEEEEECC-CCcEEEEECCCcE
Confidence 35677889999999999999998 88999999999999864 12222 3469999999999
Q ss_pred EEEECCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeCCCe-EEEEEC
Q psy7057 62 KLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDTD-FVSCSN 138 (557)
Q Consensus 62 ~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~~~~-lvs~s~ 138 (557)
++||+.+++++.++.+|...|.+++|+|++ .+++|+.|++|++|| .++.++..+.+|...|++++|+|++. |++|+.
T Consensus 167 ~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~ 246 (340)
T 1got_B 167 ALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSD 246 (340)
T ss_dssp EEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred EEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcC
Confidence 999999999999999999999999999988 999999999999999 57788899999999999999999976 779999
Q ss_pred CCeEEEEECCCCeEEEEEeC--CCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC---ceEeeCCccEEEEEEcCCCc-
Q psy7057 139 DASIRVWDSTTGKCVHTMYG--HPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ---NSFMIPAMSVWAVAILPNSD- 210 (557)
Q Consensus 139 Dg~I~vwd~~~~~~~~~~~~--h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~---~~~~~~~~~v~~v~~~p~g~- 210 (557)
|++|++||+++++.+..+.. +...|.+++| ++.+|++|+.|+.|++||.... ..+..|...|.+++|+|++.
T Consensus 247 d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~ 326 (340)
T 1got_B 247 DATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMA 326 (340)
T ss_dssp TSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSC
T ss_pred CCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccCcEeeEeecCCCcEEEEEEcCCCCE
Confidence 99999999999988887753 3357999999 6789999999999999997655 56788999999999999998
Q ss_pred EEEEEcCCcEEEEe
Q psy7057 211 IVTGSSDGIVRVFS 224 (557)
Q Consensus 211 l~sg~~Dg~I~iwd 224 (557)
|++|+.|++|+||+
T Consensus 327 l~s~s~D~~i~iWd 340 (340)
T 1got_B 327 VATGSWDSFLKIWN 340 (340)
T ss_dssp EEEEETTSCEEEEC
T ss_pred EEEEcCCccEEecC
Confidence 99999999999996
No 32
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=6.6e-32 Score=270.68 Aligned_cols=223 Identities=16% Similarity=0.225 Sum_probs=190.4
Q ss_pred EEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC------------------CCCCC--CCCEEEEEECCCeEEE
Q psy7057 5 STALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND------------------LSPGA--KVNTLLSASWDMTAKL 63 (557)
Q Consensus 5 ~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~------------------~~~~~--~~~~l~sgs~Dg~i~i 63 (557)
+..+.+|.+.|++++|+|+|+ |++|+.|++|+||++.. +.+++ .+.+|++|+.|++|++
T Consensus 2 ~~~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~i 81 (297)
T 2pm7_B 2 VVIANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMI 81 (297)
T ss_dssp CEECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEE
T ss_pred ceeccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEE
Confidence 356889999999999999998 99999999999999852 34443 3789999999999999
Q ss_pred EECCCCe--EEEEEcccCCcEEEEEEcCC--C-EEEEEECCCeEEEEeCCCc---EEEEEeCCCCCEEEEEEeCCC----
Q psy7057 64 WCLESQQ--CKLTIRQHEMAVWGVIQLAN--G-IIVTGCADKTIKLHSEEGE---FLKTLTGHTDCVRGLAVLNDT---- 131 (557)
Q Consensus 64 wd~~~~~--~~~~l~~h~~~V~~l~~~~~--~-~l~sgs~dg~I~vwd~~~~---~~~~l~~h~~~V~~l~~~~~~---- 131 (557)
||+.+++ .+..+.+|...|.+++|+|+ + .|++|+.|++|++||.... ....+.+|...|.+++|+|++
T Consensus 82 Wd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~ 161 (297)
T 2pm7_B 82 WKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEED 161 (297)
T ss_dssp EEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC----
T ss_pred EEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCccccc
Confidence 9998874 56778889999999999996 5 8999999999999995322 246678999999999999862
Q ss_pred ----------eEEEEECCCeEEEEECCCCe----EEEEEeCCCCcEEEEEEcC-----CEEEEEeCCCeEEEEECCCC--
Q psy7057 132 ----------DFVSCSNDASIRVWDSTTGK----CVHTMYGHPNFIYSVAAHG-----DLITSGGEDQCVCVYQNKAQ-- 190 (557)
Q Consensus 132 ----------~lvs~s~Dg~I~vwd~~~~~----~~~~~~~h~~~V~~l~~~~-----~~l~s~s~Dg~I~iwd~~~~-- 190 (557)
.|++|+.|++|++||+++++ +..++.+|...|++++|++ .+|++++.|++|++||....
T Consensus 162 ~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~ 241 (297)
T 2pm7_B 162 GEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQG 241 (297)
T ss_dssp --------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTS
T ss_pred ccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCC
Confidence 58899999999999998765 6778899999999999943 58999999999999996542
Q ss_pred ----ceE--eeCCccEEEEEEcCCCc-EEEEEcCCcEEEEecCC
Q psy7057 191 ----NSF--MIPAMSVWAVAILPNSD-IVTGSSDGIVRVFSANP 227 (557)
Q Consensus 191 ----~~~--~~~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~ 227 (557)
..+ ..|...|++++|+|++. |++++.|++|+||+...
T Consensus 242 ~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~~ 285 (297)
T 2pm7_B 242 PWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 285 (297)
T ss_dssp CCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEECT
T ss_pred ccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEECC
Confidence 122 34677899999999998 99999999999999763
No 33
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=1.1e-31 Score=280.86 Aligned_cols=256 Identities=16% Similarity=0.189 Sum_probs=216.6
Q ss_pred EEEEEEcCCCc-EEEEECCCcEEEEcCCC---------------CCCCCCCCEEEEEECCCeEEEEECCCCeEEEEEccc
Q psy7057 15 VRSLSVTPDGC-ILSASRDKSAKLWKPND---------------LSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQH 78 (557)
Q Consensus 15 V~~l~~spdg~-l~sgs~Dg~V~iWd~~~---------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h 78 (557)
+++++|+|+++ |++++.|+.|++||+.+ ..+.+++++|++|+.|+.|++||+.+++....+.+|
T Consensus 59 ~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h 138 (420)
T 3vl1_A 59 GKGNTFEKVGSHLYKARLDGHDFLFNTIIRDGSKMLKRADYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAH 138 (420)
T ss_dssp CTTCEEEEEETTEEEEEETTEEEEEECCSEETTTTSCSCCEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETTSS
T ss_pred ccceeeeecCCeEEEEEcCCcEEEEEecccceeeEEecCCceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeecccc
Confidence 45899999998 99999999999999876 245678899999999999999999999988888899
Q ss_pred CCcEEEEEEcCCC-EEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeCCCe-EEEEECCCeEEEEECCCCeEEEE
Q psy7057 79 EMAVWGVIQLANG-IIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDTD-FVSCSNDASIRVWDSTTGKCVHT 155 (557)
Q Consensus 79 ~~~V~~l~~~~~~-~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~~~~-lvs~s~Dg~I~vwd~~~~~~~~~ 155 (557)
...|.+++|+|++ .|++|+.|++|++|| .+++.+..+.+|...|.+++|+|++. |++++.|++|++||+++++++..
T Consensus 139 ~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~ 218 (420)
T 3vl1_A 139 VSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHT 218 (420)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEE
T ss_pred cCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEE
Confidence 9999999999998 999999999999999 56778889999999999999999976 77999999999999999999999
Q ss_pred EeC---CCCcEEEEEE-----------------------cCCEEEEEeCCCeEEEEECCCCc---eE-eeCCccEEEEEE
Q psy7057 156 MYG---HPNFIYSVAA-----------------------HGDLITSGGEDQCVCVYQNKAQN---SF-MIPAMSVWAVAI 205 (557)
Q Consensus 156 ~~~---h~~~V~~l~~-----------------------~~~~l~s~s~Dg~I~iwd~~~~~---~~-~~~~~~v~~v~~ 205 (557)
+.. |...+.++++ ++++|++++.|+.|++||++... .+ ..|...|.+++|
T Consensus 219 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~ 298 (420)
T 3vl1_A 219 FNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTV 298 (420)
T ss_dssp ECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEE
T ss_pred eecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEE
Confidence 875 4556666665 45689999999999999987662 22 236678999999
Q ss_pred cCCCc--EEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecCC
Q psy7057 206 LPNSD--IVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANP 272 (557)
Q Consensus 206 ~p~g~--l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~ 272 (557)
+|++. +++|+.||.|++||+.+...........+...+..+.+. ....+++++.||.|++|++..
T Consensus 299 ~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~l~s~~~d~~v~iw~~~~ 365 (420)
T 3vl1_A 299 DGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVYFA--AGALFVSSGFDTSIKLDIISD 365 (420)
T ss_dssp CSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEEEEE--TTEEEEEETTTEEEEEEEECC
T ss_pred eCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEEEeC--CCCEEEEecCCccEEEEeccC
Confidence 99987 889999999999999876542222222245567777554 234789999999999999876
No 34
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=9.7e-32 Score=273.87 Aligned_cols=269 Identities=15% Similarity=0.160 Sum_probs=219.4
Q ss_pred EEEEeccCcccEEEEEEcCCCc-EE-EEEC---CCcEEEEcCCC-----------------CCCCCC---CCEEEEEECC
Q psy7057 4 LSTALYGHSMDVRSLSVTPDGC-IL-SASR---DKSAKLWKPND-----------------LSPGAK---VNTLLSASWD 58 (557)
Q Consensus 4 l~~~l~gH~~~V~~l~~spdg~-l~-sgs~---Dg~V~iWd~~~-----------------~~~~~~---~~~l~sgs~D 58 (557)
+...+++|.+.|++++|+|++. ++ +|+. |++|++||+.+ +.++++ +.+|++|+.|
T Consensus 10 ~~~~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d 89 (357)
T 3i2n_A 10 IAHIQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFG 89 (357)
T ss_dssp EEEEEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETT
T ss_pred hhhhccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCC
Confidence 3456788999999999999985 54 5655 99999999876 566776 6999999999
Q ss_pred CeEEEEECCCCe-EEEEEcccCCcEEEEEE------cCCC-EEEEEECCCeEEEEeC-CCc-EEEEEeCCCC----CEEE
Q psy7057 59 MTAKLWCLESQQ-CKLTIRQHEMAVWGVIQ------LANG-IIVTGCADKTIKLHSE-EGE-FLKTLTGHTD----CVRG 124 (557)
Q Consensus 59 g~i~iwd~~~~~-~~~~l~~h~~~V~~l~~------~~~~-~l~sgs~dg~I~vwd~-~~~-~~~~l~~h~~----~V~~ 124 (557)
+.|++||+.+++ ++..+.+|...|.++.| +|++ .|++++.|+.|++||. .+. ++..+..|.. .|.+
T Consensus 90 g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~ 169 (357)
T 3i2n_A 90 GNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWT 169 (357)
T ss_dssp SCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEE
T ss_pred CeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEE
Confidence 999999999987 88899999999999965 5666 9999999999999994 333 6777766654 8999
Q ss_pred EE----EeCCCe-EEEEECCCeEEEEECCCCeEEEEEeCCCCcEEEEEEc-----CCEEEEEeCCCeEEEEECCCC---c
Q psy7057 125 LA----VLNDTD-FVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAAH-----GDLITSGGEDQCVCVYQNKAQ---N 191 (557)
Q Consensus 125 l~----~~~~~~-lvs~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~~-----~~~l~s~s~Dg~I~iwd~~~~---~ 191 (557)
++ ++|++. +++++.|+.|++||++++++... ..|...|.+++++ +..|++++.|+.|++||++.. .
T Consensus 170 ~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~ 248 (357)
T 3i2n_A 170 VAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWE-TNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTK 248 (357)
T ss_dssp EEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEE-EECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTT
T ss_pred EEEEeccCCCCCEEEEEccCCeEEEEECccCceeee-cCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCccc
Confidence 98 566766 77999999999999999887554 5689999999994 478999999999999996543 3
Q ss_pred eEe-----eCCccEEEEEEcCCCc--EEEEEcCCcEEEEecCCCCcc-----------------hhHHHhcccceeEEEe
Q psy7057 192 SFM-----IPAMSVWAVAILPNSD--IVTGSSDGIVRVFSANPDRQA-----------------EDAVQAQYAEEVKKLK 247 (557)
Q Consensus 192 ~~~-----~~~~~v~~v~~~p~g~--l~sg~~Dg~I~iwd~~~~~~~-----------------~~~~~~~~~~~v~~l~ 247 (557)
.+. .|...|++++|+|++. +++++.||.|++|++...... .......+...+..+.
T Consensus 249 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~ 328 (357)
T 3i2n_A 249 GFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLD 328 (357)
T ss_dssp EEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEE
T ss_pred ceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEE
Confidence 333 7889999999999987 789999999999999765432 1223345677889999
Q ss_pred ccCCCceeEEEEeCCCcEEEEecCCC
Q psy7057 248 SANEQEIGGVKVSDDGIVRVFSANPD 273 (557)
Q Consensus 248 ~~~~~~~~~vs~s~DG~IrvW~~~~~ 273 (557)
+.+.....+++++.||.|+||++...
T Consensus 329 ~s~~~~~l~~s~~~d~~i~iw~~~~~ 354 (357)
T 3i2n_A 329 WSPDKRGLCVCSSFDQTVRVLIVTKL 354 (357)
T ss_dssp ECSSSTTEEEEEETTSEEEEEEECC-
T ss_pred EcCCCCeEEEEecCCCcEEEEECCCc
Confidence 98887765569999999999998754
No 35
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=5.2e-32 Score=279.10 Aligned_cols=222 Identities=18% Similarity=0.156 Sum_probs=191.6
Q ss_pred EeccCcccEEEEEEcCCCcEEEEECCCcEEEEcCCC--------------------CCCCCCCCEEEEEECCCeEEEEEC
Q psy7057 7 ALYGHSMDVRSLSVTPDGCILSASRDKSAKLWKPND--------------------LSPGAKVNTLLSASWDMTAKLWCL 66 (557)
Q Consensus 7 ~l~gH~~~V~~l~~spdg~l~sgs~Dg~V~iWd~~~--------------------~~~~~~~~~l~sgs~Dg~i~iwd~ 66 (557)
...+|...|++++|+|++++++++.||+|+|||+.+ +++++++.+|++|+.|++|++||+
T Consensus 89 ~~~~~~~~V~~~~~s~d~~~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~ 168 (357)
T 4g56_B 89 AGVQTEAGVTDVAWVSEKGILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDL 168 (357)
T ss_dssp EEEECSSCEEEEEEETTTEEEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEET
T ss_pred ccCCCCCCEEEEEEcCCCCEEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEEC
Confidence 345789999999999999999999999999999865 567888999999999999999999
Q ss_pred CCCeEEEEEcccCCcEEEEEEcCCC--EEEEEECCCeEEEEeC-CCcEEEEE--eCCCCCEEEEEEeCCC-e-EEEEECC
Q psy7057 67 ESQQCKLTIRQHEMAVWGVIQLANG--IIVTGCADKTIKLHSE-EGEFLKTL--TGHTDCVRGLAVLNDT-D-FVSCSND 139 (557)
Q Consensus 67 ~~~~~~~~l~~h~~~V~~l~~~~~~--~l~sgs~dg~I~vwd~-~~~~~~~l--~~h~~~V~~l~~~~~~-~-lvs~s~D 139 (557)
.+++++..+.+|...|.+++|++++ .+++++.|++|++||. +++++..+ ..|...+.+++|+|++ . |++|+.|
T Consensus 169 ~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d 248 (357)
T 4g56_B 169 SQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDET 248 (357)
T ss_dssp TTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESS
T ss_pred CCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecc
Confidence 9999999999999999999999976 7999999999999994 45554443 4577889999999974 3 6799999
Q ss_pred CeEEEEECCCCeEEEEEeCCCCcEEEEEE--cC-CEEEEEeCCCeEEEEECCCC--ceEeeCCccEEEEEEcC-CCc-EE
Q psy7057 140 ASIRVWDSTTGKCVHTMYGHPNFIYSVAA--HG-DLITSGGEDQCVCVYQNKAQ--NSFMIPAMSVWAVAILP-NSD-IV 212 (557)
Q Consensus 140 g~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~-~~l~s~s~Dg~I~iwd~~~~--~~~~~~~~~v~~v~~~p-~g~-l~ 212 (557)
+.|++||+++++++.++.+|...|++++| ++ .+|++|+.|++|++||..+. .....|...|++|+|+| ++. |+
T Consensus 249 ~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~~H~~~V~~vafsP~d~~~l~ 328 (357)
T 4g56_B 249 GNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDLSHRDFVTGVAWSPLDHSKFT 328 (357)
T ss_dssp SCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEECCCSSCEEEEEECSSSTTEEE
T ss_pred cceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEECCCCCCEEEEEEeCCCCCEEE
Confidence 99999999999999999999999999999 44 57999999999999998766 34456888999999998 666 88
Q ss_pred EEEcCCcEEEEecCCC
Q psy7057 213 TGSSDGIVRVFSANPD 228 (557)
Q Consensus 213 sg~~Dg~I~iwd~~~~ 228 (557)
+++.||+|++|++...
T Consensus 329 s~s~Dg~v~iW~~~~~ 344 (357)
T 4g56_B 329 TVGWDHKVLHHHLPSE 344 (357)
T ss_dssp EEETTSCEEEEECC--
T ss_pred EEcCCCeEEEEECCCC
Confidence 9999999999999754
No 36
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=3.1e-31 Score=266.67 Aligned_cols=229 Identities=20% Similarity=0.271 Sum_probs=199.1
Q ss_pred CCCCCCCCEEEEEECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEe-CCCcEEEEEeCCCC
Q psy7057 43 LSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHS-EEGEFLKTLTGHTD 120 (557)
Q Consensus 43 ~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~ 120 (557)
++++|++.+|++|+.|++|++||+.+++.+..+..|..+|.+++|+|++ .|++|+.|++|++|| .+++++..+.+|..
T Consensus 19 ~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~ 98 (304)
T 2ynn_A 19 IDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPD 98 (304)
T ss_dssp EEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSS
T ss_pred EEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEEEEeCCCC
Confidence 5678889999999999999999999999999999999999999999988 999999999999999 57888999999999
Q ss_pred CEEEEEEeCCCe-EEEEECCCeEEEEECCCC-eEEEEEeCCCCcEEEEEEc---CCEEEEEeCCCeEEEEECCCC---ce
Q psy7057 121 CVRGLAVLNDTD-FVSCSNDASIRVWDSTTG-KCVHTMYGHPNFIYSVAAH---GDLITSGGEDQCVCVYQNKAQ---NS 192 (557)
Q Consensus 121 ~V~~l~~~~~~~-lvs~s~Dg~I~vwd~~~~-~~~~~~~~h~~~V~~l~~~---~~~l~s~s~Dg~I~iwd~~~~---~~ 192 (557)
.|++++|+|++. +++|+.|++|++||++++ .+...+.+|...|.+++|+ +..|++|+.|++|++||++.. ..
T Consensus 99 ~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~ 178 (304)
T 2ynn_A 99 YIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFT 178 (304)
T ss_dssp CEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEE
T ss_pred cEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccce
Confidence 999999999976 779999999999999877 5667889999999999993 468999999999999997654 22
Q ss_pred E-eeCCccEEEEEEcC--CCc-EEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEE
Q psy7057 193 F-MIPAMSVWAVAILP--NSD-IVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVF 268 (557)
Q Consensus 193 ~-~~~~~~v~~v~~~p--~g~-l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW 268 (557)
+ ..+...+..++++| ++. +++|+.|++|++||+++.+.. .....|...+..+.+.+... .+++++.||+|++|
T Consensus 179 ~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~--~~~~~h~~~v~~~~~~p~~~-~l~s~s~Dg~i~iW 255 (304)
T 2ynn_A 179 LTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCV--ATLEGHMSNVSFAVFHPTLP-IIISGSEDGTLKIW 255 (304)
T ss_dssp EECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEE--EEEECCSSCEEEEEECSSSS-EEEEEETTSCEEEE
T ss_pred eccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccc--eeeCCCCCCEEEEEECCCCC-EEEEEcCCCeEEEE
Confidence 3 34557899999987 455 899999999999999877644 23456777888888877665 68999999999999
Q ss_pred ecCCCh
Q psy7057 269 SANPDR 274 (557)
Q Consensus 269 ~~~~~~ 274 (557)
++.+.+
T Consensus 256 d~~~~~ 261 (304)
T 2ynn_A 256 NSSTYK 261 (304)
T ss_dssp ETTTCC
T ss_pred ECCCCc
Confidence 987653
No 37
>3pst_A Protein DOA1; protein degradation, CDC48, ubiquitin, nuclear protein; 2.00A {Saccharomyces cerevisiae} PDB: 3psp_A
Probab=100.00 E-value=1.9e-35 Score=299.79 Aligned_cols=118 Identities=37% Similarity=0.697 Sum_probs=57.5
Q ss_pred CCCcccccCCCccCccEEEEee-CCeEEEEEEecCCCceeEeeEEecCCCCccccCCeeEecceeeeeEEEEecCCCCCc
Q psy7057 307 LPGKEVLYEPGKADGDVKMVRE-GSTVVAYSWSEASREWNKLGDVMGSAGGTQESSGKVLYQGKEYDFVFSVDIEEGKPP 385 (557)
Q Consensus 307 l~~~~~~~~~G~~~~~~~~~~~-g~~~~~~~w~~~~~~W~~~g~v~~~~~~~~~~~~~~~~~g~~~d~v~~v~~~~g~~~ 385 (557)
||+.+.+..||+++|+++++|+ ++++++|+|+. ++|+++|+|||+..+
T Consensus 34 lp~~e~l~~~G~~~Gq~~~v~~~~g~v~ay~ws~--~~W~~iG~Vv~~~~~----------------------------- 82 (425)
T 3pst_A 34 SSPYEILQSPGRKEGQIVVVKSPQGTIEAHQFSN--SSWKKVGDVVGAGAT----------------------------- 82 (425)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCHHHhcCCCCCCCeEEEEECCCCCEEEEEEcC--CceeEEeEEecCCCC-----------------------------
Confidence 9999999999999999999997 58899999995 899999999975200
Q ss_pred ccCCCccCCChHHHHHHHHHHcCCChHHHHHHHHHHHhcCCCCCCCCccceeeeeeeccCCCCCCCCCccCCCccccccc
Q psy7057 386 LKLPYNVSEDPWHAAQAFIHTHHLSQMFLEQVANFIMTNSKSKQGPTEYDFVFSVDIEEGKPPLKLPYNVSEDPWHAAQA 465 (557)
Q Consensus 386 ~~l~~n~~~~~~~~a~~~~~~~~l~~~~~~~v~~~i~~~~~~~~~g~~yd~vf~vd~~~g~p~~klp~n~~~~p~~~a~~ 465 (557)
.+..|..|+||||||||||||+||+||||||||++||||+||||
T Consensus 83 ------------------------------------~~~~k~~~~Gk~YDyvf~Vdi~~g~p~lkLpyN~~~np~~~A~~ 126 (425)
T 3pst_A 83 ------------------------------------GNDKKIEFEGKTYDYVFDVDIEDGKPPLKLPINVSDNPYTAADN 126 (425)
T ss_dssp ---------------------------------------CCEEETTEEESEEEEECCSTTCCCEEEEECTTCCHHHHHHH
T ss_pred ------------------------------------CCCCceeecCcccceEEEEEcCCCCccccCCccCCCCHHHHHHH
Confidence 02345578999999999999999999999999999888877776
Q ss_pred ccccCCCceecccCCCCCcccccccCCChHHHHHhhhhcCCCChHHHHHHHHHHHhcccCC
Q psy7057 466 FIHTHHLTSVDIEEGKPPLKLPYNVSEDPWHAAQAFIHTHHLSQMFLEQVANFIMTNSKSK 526 (557)
Q Consensus 466 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~v~~fi~~n~~~~ 526 (557)
|| ++|+||++||||||+||++||+++
T Consensus 127 Fi-----------------------------------~~~~L~~~y~~qi~~FI~~N~~~~ 152 (425)
T 3pst_A 127 FL-----------------------------------ARYELPMSYRDQVVQLILKNTNGI 152 (425)
T ss_dssp HH-----------------------------------HHHTCCGGGHHHHHHHHHHHC---
T ss_pred HH-----------------------------------HHcCCCHHHHHHHHHHHHhcCCCc
Confidence 55 457999999999999999999854
No 38
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.4e-32 Score=285.31 Aligned_cols=266 Identities=12% Similarity=0.188 Sum_probs=214.6
Q ss_pred EEEEEe-ccCcccEEEEEEcC-CCc-EEEEECCCcEEEEcCCC---------------------CCCCCCCCEEEEEECC
Q psy7057 3 KLSTAL-YGHSMDVRSLSVTP-DGC-ILSASRDKSAKLWKPND---------------------LSPGAKVNTLLSASWD 58 (557)
Q Consensus 3 kl~~~l-~gH~~~V~~l~~sp-dg~-l~sgs~Dg~V~iWd~~~---------------------~~~~~~~~~l~sgs~D 58 (557)
++..+| .+|.+.|++++|+| ++. |++|+.||+|++||+.. +.+++++.+|++|+.|
T Consensus 53 ~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d 132 (437)
T 3gre_A 53 KLIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFAVSSKD 132 (437)
T ss_dssp CEEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEEEEETT
T ss_pred eEEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCEEEEEeCC
Confidence 456778 89999999999999 887 89999999999998643 5667788999999999
Q ss_pred CeEEEEECC---CCeEEEEEcc------------cCCcEEEEE--EcCCC-EEEEEECCCeEEEEe-CCCcEEEEEeC--
Q psy7057 59 MTAKLWCLE---SQQCKLTIRQ------------HEMAVWGVI--QLANG-IIVTGCADKTIKLHS-EEGEFLKTLTG-- 117 (557)
Q Consensus 59 g~i~iwd~~---~~~~~~~l~~------------h~~~V~~l~--~~~~~-~l~sgs~dg~I~vwd-~~~~~~~~l~~-- 117 (557)
++|++||+. +++....+.. +...+.++. +++++ .+++|+.|+.|++|| .+++++..+.+
T Consensus 133 g~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~ 212 (437)
T 3gre_A 133 GQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSP 212 (437)
T ss_dssp SEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCG
T ss_pred CEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCC
Confidence 999999994 5544443332 455666666 44666 999999999999999 57788889988
Q ss_pred CCCCEEEEEEeCCCe-EEEEECCCeEEEEECCCCeEEEEEe-CCCCcEEEEEEc------CCEEEEEeCCCeEEEEECCC
Q psy7057 118 HTDCVRGLAVLNDTD-FVSCSNDASIRVWDSTTGKCVHTMY-GHPNFIYSVAAH------GDLITSGGEDQCVCVYQNKA 189 (557)
Q Consensus 118 h~~~V~~l~~~~~~~-lvs~s~Dg~I~vwd~~~~~~~~~~~-~h~~~V~~l~~~------~~~l~s~s~Dg~I~iwd~~~ 189 (557)
|...|++++|+|++. |++|+.|++|++||+++++++.++. .|...|.++++. +.+|++++.|+.|++||+++
T Consensus 213 h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 292 (437)
T 3gre_A 213 RHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVK 292 (437)
T ss_dssp GGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTT
T ss_pred CCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCC
Confidence 889999999999976 7799999999999999999999986 788899999763 34899999999999999875
Q ss_pred C---ceEee--------------------------CCccEEEEEEcCCCc-EEEEEcCCcEEEEecCCCCcchhHH----
Q psy7057 190 Q---NSFMI--------------------------PAMSVWAVAILPNSD-IVTGSSDGIVRVFSANPDRQAEDAV---- 235 (557)
Q Consensus 190 ~---~~~~~--------------------------~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~~~~~~~---- 235 (557)
. ..+.. |...|++++|+ ++. |++|+.|+.|++||+.+++......
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~ 371 (437)
T 3gre_A 293 GHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSLNELSSSKAVISPSR 371 (437)
T ss_dssp TEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETTCGGGCEEEECC--
T ss_pred CcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecCCCCeEEEEECCCcccceEEecccc
Confidence 5 22322 45568899999 556 8999999999999998765432111
Q ss_pred -------------------------------HhcccceeEEEeccCC-CceeEEEEeCCCcEEEEe
Q psy7057 236 -------------------------------QAQYAEEVKKLKSANE-QEIGGVKVSDDGIVRVFS 269 (557)
Q Consensus 236 -------------------------------~~~~~~~v~~l~~~~~-~~~~~vs~s~DG~IrvW~ 269 (557)
...|...|..+.+.+. ....+++++.||.|+||+
T Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 372 FSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSSSEEEEEEETTSCEEEEC
T ss_pred cCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCCceEEEEEcCCceEEEeC
Confidence 1126677888877766 455789999999999995
No 39
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.4e-31 Score=269.69 Aligned_cols=226 Identities=23% Similarity=0.392 Sum_probs=187.9
Q ss_pred cEEEEEe-cc-CcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC-----------------------CCCCCCCCEEEEE
Q psy7057 2 YKLSTAL-YG-HSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND-----------------------LSPGAKVNTLLSA 55 (557)
Q Consensus 2 ~kl~~~l-~g-H~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~-----------------------~~~~~~~~~l~sg 55 (557)
+++...+ .+ |.+.|++++|+|++. |++|+.|++|+||++.. ++++|++.+|++|
T Consensus 46 ~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~ 125 (330)
T 2hes_X 46 FTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATC 125 (330)
T ss_dssp CEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEE
T ss_pred eEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEE
Confidence 3556666 45 999999999999998 88999999999998731 6778889999999
Q ss_pred ECCCeEEEEECCC----CeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeC-CC--cEEEEEeCCCCCEEEEEE
Q psy7057 56 SWDMTAKLWCLES----QQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSE-EG--EFLKTLTGHTDCVRGLAV 127 (557)
Q Consensus 56 s~Dg~i~iwd~~~----~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~-~~--~~~~~l~~h~~~V~~l~~ 127 (557)
+.|++|++||+.. .+++..+.+|...|.+++|+|++ .|++|+.|++|++||. .+ .++..+.+|...|.+++|
T Consensus 126 s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~ 205 (330)
T 2hes_X 126 SRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDF 205 (330)
T ss_dssp ETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEE
T ss_pred eCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEe
Confidence 9999999999943 35778899999999999999988 9999999999999994 33 578889999999999999
Q ss_pred eCC--Ce-EEEEECCCeEEEEECCCC--------eEEEEEeC-CCCcEEEEEE-cCCEEEEEeCCCeEEEEECCCC--c-
Q psy7057 128 LND--TD-FVSCSNDASIRVWDSTTG--------KCVHTMYG-HPNFIYSVAA-HGDLITSGGEDQCVCVYQNKAQ--N- 191 (557)
Q Consensus 128 ~~~--~~-lvs~s~Dg~I~vwd~~~~--------~~~~~~~~-h~~~V~~l~~-~~~~l~s~s~Dg~I~iwd~~~~--~- 191 (557)
+|+ +. |++++.|++|++||++.+ .+...+.+ |...|++++| .+..|++++.|++|++|+.... .
T Consensus 206 ~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~l~s~~~dg~v~iw~~~~~~~~~ 285 (330)
T 2hes_X 206 DKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNGLIASVGADGVLAVYEEVDGEWKV 285 (330)
T ss_dssp CCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTSCEEEEETTSCEEEEEEETTEEEE
T ss_pred cCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCCEEEEEeCCCEEEEEEcCCCceEE
Confidence 998 43 789999999999998654 45555655 8999999999 4568999999999999996543 1
Q ss_pred ---eEeeCCc-cEEEEEEcC--CCc-EEEEEcCCcEEEEecCC
Q psy7057 192 ---SFMIPAM-SVWAVAILP--NSD-IVTGSSDGIVRVFSANP 227 (557)
Q Consensus 192 ---~~~~~~~-~v~~v~~~p--~g~-l~sg~~Dg~I~iwd~~~ 227 (557)
....|.. .|.+++|+| ++. |++|+.||+|+||++..
T Consensus 286 ~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 286 FAKRALCHGVYEINVVKWLELNGKTILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp EEEESCTTTTSCEEEEEEC-----CCEEEEETTSEEEEEEC--
T ss_pred EeccccccccceEEEEEEecCCCceEEEEecCCCcEEEEEecc
Confidence 1234665 899999999 566 99999999999999864
No 40
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.4e-32 Score=283.54 Aligned_cols=263 Identities=13% Similarity=0.120 Sum_probs=205.2
Q ss_pred EeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC------------------CCCCCCCCEEEEEECCCeEEEEECC
Q psy7057 7 ALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND------------------LSPGAKVNTLLSASWDMTAKLWCLE 67 (557)
Q Consensus 7 ~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~------------------~~~~~~~~~l~sgs~Dg~i~iwd~~ 67 (557)
.++.|.++|++++|+|+++ |++|+.|++|++||+.+ +.+++++++|++++.|++|++||+.
T Consensus 6 ~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~ 85 (377)
T 3dwl_C 6 VLHILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKR 85 (377)
T ss_dssp EEEECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC---
T ss_pred eEecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcC
Confidence 4555788999999999998 88999999999999864 5677889999999999999999999
Q ss_pred CCe---EEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeCCCc----EEEEEeC-CCCCEEEEEEeCCCe-EEEEE
Q psy7057 68 SQQ---CKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSEEGE----FLKTLTG-HTDCVRGLAVLNDTD-FVSCS 137 (557)
Q Consensus 68 ~~~---~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~~~----~~~~l~~-h~~~V~~l~~~~~~~-lvs~s 137 (557)
+++ +...+.+|...|.+++|+|++ .|++++.|+.|++||.... ....+.+ |...|.+++|+|++. |++++
T Consensus 86 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~ 165 (377)
T 3dwl_C 86 PDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGC 165 (377)
T ss_dssp ---CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEE
T ss_pred CCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEe
Confidence 876 677888899999999999988 8999999999999995443 3677777 999999999999976 77999
Q ss_pred CCCeEEEEECC------------------CCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC-------
Q psy7057 138 NDASIRVWDST------------------TGKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ------- 190 (557)
Q Consensus 138 ~Dg~I~vwd~~------------------~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~------- 190 (557)
.|++|++||++ .++++..+ +|...|.+++| ++++|++++.|++|++||+...
T Consensus 166 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~ 244 (377)
T 3dwl_C 166 ADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRAL 244 (377)
T ss_dssp SSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEEC
T ss_pred CCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceee
Confidence 99999999985 35567777 89999999999 6779999999999999996544
Q ss_pred ceEeeCCccEEEEEEcCCCcEEEEEcCCcEEEEecCCCCcc-----h--------------------h---------H--
Q psy7057 191 NSFMIPAMSVWAVAILPNSDIVTGSSDGIVRVFSANPDRQA-----E--------------------D---------A-- 234 (557)
Q Consensus 191 ~~~~~~~~~v~~v~~~p~g~l~sg~~Dg~I~iwd~~~~~~~-----~--------------------~---------~-- 234 (557)
..+..|...|.+++|+|++++++++.++.+.+|+....... . . .
T Consensus 245 ~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (377)
T 3dwl_C 245 ITVKLSQLPLRSLLWANESAIVAAGYNYSPILLQGNESGWAHTRDLDAGTSKTSFTHTGNTGEGREEEGPVSFTALRSTF 324 (377)
T ss_dssp CCEECSSSCEEEEEEEETTEEEEEESSSSEEEECCCC---CCSBCCCSCCCCCCBSSSSSBCCCCCC-------------
T ss_pred EeecCCCCceEEEEEcCCCCEEEEEcCCcEEEEEeCCCceEEEeeecccccccccccccccccccccccccccccccccc
Confidence 45677888999999999999555555555667876522100 0 0 0
Q ss_pred --------------HHhcccceeEEEeccCCCce---eEEEEeCCCcEEEEec
Q psy7057 235 --------------VQAQYAEEVKKLKSANEQEI---GGVKVSDDGIVRVFSA 270 (557)
Q Consensus 235 --------------~~~~~~~~v~~l~~~~~~~~---~~vs~s~DG~IrvW~~ 270 (557)
....|...+..+...+.... .++|++.||.|+||++
T Consensus 325 ~~~~~~g~~~~~~~~~~~H~~~i~~~~~~~~~~~~~~~~~s~g~Dg~i~iWdl 377 (377)
T 3dwl_C 325 RNMDLKGSSQSISSLPTVHQNMIATLRPYAGTPGNITAFTSSGTDGRVVLWTL 377 (377)
T ss_dssp ------------CCCSSSCSSCEEEEEEEEEETTEEEEEEEEETTSEEEEECC
T ss_pred cchhhccccccccccCccccceeEEEeccCCCCCceEEEEeecCCCcEEEecC
Confidence 00116667777765444332 5899999999999985
No 41
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=2e-30 Score=266.85 Aligned_cols=222 Identities=23% Similarity=0.264 Sum_probs=199.0
Q ss_pred EEEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC----------------------CCCCCCCCEEEEEECCC
Q psy7057 3 KLSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND----------------------LSPGAKVNTLLSASWDM 59 (557)
Q Consensus 3 kl~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~----------------------~~~~~~~~~l~sgs~Dg 59 (557)
+..+.+..|...|.+++|+|+|. |++|+.|+.+++|++.. +.+.+++..|++++.|+
T Consensus 97 ~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~ 176 (354)
T 2pbi_B 97 NKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDG 176 (354)
T ss_dssp CEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTS
T ss_pred CcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCC
Confidence 45567888999999999999998 88999999999998742 45677888999999999
Q ss_pred eEEEEECCCCeEEEEEcccCCcEEEEEEcC--CC-EEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeCCCe-EE
Q psy7057 60 TAKLWCLESQQCKLTIRQHEMAVWGVIQLA--NG-IIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDTD-FV 134 (557)
Q Consensus 60 ~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~--~~-~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~~~~-lv 134 (557)
+|++||+++++++.++.+|...|.+++++| ++ .|++|+.|++|++|| .+++++..+.+|...|.+++|+|++. |+
T Consensus 177 ~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~ 256 (354)
T 2pbi_B 177 TCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFA 256 (354)
T ss_dssp EEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEE
T ss_pred cEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEE
Confidence 999999999999999999999999999987 34 999999999999999 57788999999999999999999976 77
Q ss_pred EEECCCeEEEEECCCCeEEEEEeCC--CCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC---ceEeeCCccEEEEEEcC
Q psy7057 135 SCSNDASIRVWDSTTGKCVHTMYGH--PNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ---NSFMIPAMSVWAVAILP 207 (557)
Q Consensus 135 s~s~Dg~I~vwd~~~~~~~~~~~~h--~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~---~~~~~~~~~v~~v~~~p 207 (557)
+++.|++|++||+++++.+..+..+ ...+.+++| ++.+|++++.|++|++||+.+. ..+..|...|++++|+|
T Consensus 257 s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~sp 336 (354)
T 2pbi_B 257 SGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSP 336 (354)
T ss_dssp EEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECT
T ss_pred EEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCceEEEEECCCCcEEEEEECC
Confidence 9999999999999999888777644 347889998 6789999999999999997655 56678999999999999
Q ss_pred CCc-EEEEEcCCcEEEEe
Q psy7057 208 NSD-IVTGSSDGIVRVFS 224 (557)
Q Consensus 208 ~g~-l~sg~~Dg~I~iwd 224 (557)
++. |++|+.|++|+||+
T Consensus 337 dg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 337 DGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp TSSCEEEEETTSEEEEEC
T ss_pred CCCEEEEEcCCCCEEecC
Confidence 998 99999999999995
No 42
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=4.1e-32 Score=274.74 Aligned_cols=221 Identities=21% Similarity=0.268 Sum_probs=184.9
Q ss_pred EEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC------------------CCCCC--CCCEEEEEECCCeEEEE
Q psy7057 6 TALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND------------------LSPGA--KVNTLLSASWDMTAKLW 64 (557)
Q Consensus 6 ~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~------------------~~~~~--~~~~l~sgs~Dg~i~iw 64 (557)
..+.+|.+.|++++|+|+|+ |++|+.|++|+|||+.+ +++.+ ++++|++|+.|++|++|
T Consensus 7 ~~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iW 86 (316)
T 3bg1_A 7 TVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIW 86 (316)
T ss_dssp -------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEE
T ss_pred eecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEE
Confidence 34679999999999999998 89999999999999753 34443 47899999999999999
Q ss_pred ECCCC--eEEEEEcccCCcEEEEEEcCC--C-EEEEEECCCeEEEEeCCCc----EEEEEeCCCCCEEEEEEeCC-----
Q psy7057 65 CLESQ--QCKLTIRQHEMAVWGVIQLAN--G-IIVTGCADKTIKLHSEEGE----FLKTLTGHTDCVRGLAVLND----- 130 (557)
Q Consensus 65 d~~~~--~~~~~l~~h~~~V~~l~~~~~--~-~l~sgs~dg~I~vwd~~~~----~~~~l~~h~~~V~~l~~~~~----- 130 (557)
|++++ +....+.+|...|.+++|+|+ + .|++|+.|++|++||.... ....+.+|...|.+++|+|+
T Consensus 87 d~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~ 166 (316)
T 3bg1_A 87 REENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGS 166 (316)
T ss_dssp CCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC--
T ss_pred ECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCcc
Confidence 99887 467788999999999999997 5 8999999999999995432 23455689999999999987
Q ss_pred -------------CeEEEEECCCeEEEEECCCC---eEEEEEeCCCCcEEEEEEc--C----CEEEEEeCCCeEEEEECC
Q psy7057 131 -------------TDFVSCSNDASIRVWDSTTG---KCVHTMYGHPNFIYSVAAH--G----DLITSGGEDQCVCVYQNK 188 (557)
Q Consensus 131 -------------~~lvs~s~Dg~I~vwd~~~~---~~~~~~~~h~~~V~~l~~~--~----~~l~s~s~Dg~I~iwd~~ 188 (557)
..|++|+.|++|++||++.. +++.++.+|...|++++|+ + .+|++++.|++|++|++.
T Consensus 167 ~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~ 246 (316)
T 3bg1_A 167 LIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCD 246 (316)
T ss_dssp ----CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECS
T ss_pred ccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEcc
Confidence 24889999999999998755 5777889999999999993 2 689999999999999975
Q ss_pred CC-------ceEeeCCccEEEEEEcCCCc-EEEEEcCCcEEEEecC
Q psy7057 189 AQ-------NSFMIPAMSVWAVAILPNSD-IVTGSSDGIVRVFSAN 226 (557)
Q Consensus 189 ~~-------~~~~~~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~ 226 (557)
.. ..+..|...|++++|+|++. |++++.|++|++|+..
T Consensus 247 ~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 247 DASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKES 292 (316)
T ss_dssp STTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEEC
T ss_pred CccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEEC
Confidence 41 45667888999999999998 9999999999999975
No 43
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.2e-31 Score=273.40 Aligned_cols=260 Identities=18% Similarity=0.205 Sum_probs=222.7
Q ss_pred CcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC---------------CCCCCCCCEEEEEECCCeEEEEECCCCeEEEE
Q psy7057 11 HSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND---------------LSPGAKVNTLLSASWDMTAKLWCLESQQCKLT 74 (557)
Q Consensus 11 H~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~---------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~ 74 (557)
|.+.|++++|+|++. |++++.||.|++|+... +.+++++.+|++++.|+.|++||+.+++.+..
T Consensus 107 ~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~ 186 (425)
T 1r5m_A 107 TTNQVTCLAWSHDGNSIVTGVENGELRLWNKTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQH 186 (425)
T ss_dssp -CBCEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEE
T ss_pred CCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEE
Confidence 788999999999998 88999999999999544 67788899999999999999999999999999
Q ss_pred EcccCCc---------------EEEEEEcCCCEEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeCCCe-EEEEE
Q psy7057 75 IRQHEMA---------------VWGVIQLANGIIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDTD-FVSCS 137 (557)
Q Consensus 75 l~~h~~~---------------V~~l~~~~~~~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~~~~-lvs~s 137 (557)
+..+... +.+++|++++.+++++.++.|++|| ..+..+..+..|...|.+++|+|++. |++++
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 266 (425)
T 1r5m_A 187 FELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSAS 266 (425)
T ss_dssp ECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEE
T ss_pred eeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEc
Confidence 9888777 9999999999999999999999999 45677788889999999999999975 77999
Q ss_pred CCCeEEEEECCCCeEEEEEeCCCCcEEEEEEcCC-EEEEEeCCCeEEEEECCCC---ceEeeCCccEEEEEEcCCCc-EE
Q psy7057 138 NDASIRVWDSTTGKCVHTMYGHPNFIYSVAAHGD-LITSGGEDQCVCVYQNKAQ---NSFMIPAMSVWAVAILPNSD-IV 212 (557)
Q Consensus 138 ~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~~~~-~l~s~s~Dg~I~iwd~~~~---~~~~~~~~~v~~v~~~p~g~-l~ 212 (557)
.|+.|++||+++++++..+..|...|.++++.++ .+++++.|+.|++||+... ..+..|...|.+++|+|++. |+
T Consensus 267 ~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~ 346 (425)
T 1r5m_A 267 DDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDDKVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYA 346 (425)
T ss_dssp TTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTTEEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEE
T ss_pred CCCEEEEEECCCCccceEecCCCccEEEEEECCCCEEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEE
Confidence 9999999999999999999999999999999322 9999999999999998766 55667788999999999998 88
Q ss_pred EEEcCCcEEEEecCCCCcc------------------hhHHHhcccc--eeEEEeccCCCceeEEEEeCCCcEEEEecC
Q psy7057 213 TGSSDGIVRVFSANPDRQA------------------EDAVQAQYAE--EVKKLKSANEQEIGGVKVSDDGIVRVFSAN 271 (557)
Q Consensus 213 sg~~Dg~I~iwd~~~~~~~------------------~~~~~~~~~~--~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~ 271 (557)
+++.||.|++|++...... .......+.. .+..+.+.+... .+++++.||.|++|++.
T Consensus 347 ~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 347 VAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGN-KISVAYSLQEGSVVAIP 424 (425)
T ss_dssp EEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSS-EEEEEESSSCCEEEECC
T ss_pred EEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCc-eEEEEecCceEEEEeec
Confidence 9999999999999765410 1122233433 788888877766 57899999999999975
No 44
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.3e-30 Score=267.11 Aligned_cols=224 Identities=27% Similarity=0.414 Sum_probs=189.9
Q ss_pred eccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC------------------CCCCCCCCEEEEEECCCeEEEEECCC
Q psy7057 8 LYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND------------------LSPGAKVNTLLSASWDMTAKLWCLES 68 (557)
Q Consensus 8 l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~------------------~~~~~~~~~l~sgs~Dg~i~iwd~~~ 68 (557)
+.+|.+.|++++|+|+++ |++|+.|++|++|++.. ++++|++++|++|+.|++|++||+.+
T Consensus 57 ~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~ 136 (345)
T 3fm0_A 57 SEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDE 136 (345)
T ss_dssp CSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECT
T ss_pred ccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCC
Confidence 378999999999999998 89999999999998754 67788999999999999999999987
Q ss_pred C---eEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeCC-Cc--EEEEEeCCCCCEEEEEEeCCCe-EEEEECCC
Q psy7057 69 Q---QCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSEE-GE--FLKTLTGHTDCVRGLAVLNDTD-FVSCSNDA 140 (557)
Q Consensus 69 ~---~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~-~~--~~~~l~~h~~~V~~l~~~~~~~-lvs~s~Dg 140 (557)
+ .++..+.+|...|.+++|+|++ .|++|+.|++|++|+.. +. +...+.+|...|++++|+|++. |++++.|+
T Consensus 137 ~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~ 216 (345)
T 3fm0_A 137 EDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDR 216 (345)
T ss_dssp TSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred CCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCC
Confidence 5 4567788999999999999988 99999999999999943 32 4578899999999999999976 77999999
Q ss_pred eEEEEECCC---------------CeEEEEEeC-CCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC-------c----
Q psy7057 141 SIRVWDSTT---------------GKCVHTMYG-HPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ-------N---- 191 (557)
Q Consensus 141 ~I~vwd~~~---------------~~~~~~~~~-h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~-------~---- 191 (557)
+|++||... .+++.++.+ |...|++++| ++..|++++.|+.|++|+.... .
T Consensus 217 ~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~ 296 (345)
T 3fm0_A 217 TVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTA 296 (345)
T ss_dssp CEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEE
T ss_pred eEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEe
Confidence 999999632 245666666 8899999999 6678999999999999995432 1
Q ss_pred -eEeeCCccEEEEEEcCCCc--EEEEEcCCcEEEEecCCCCcc
Q psy7057 192 -SFMIPAMSVWAVAILPNSD--IVTGSSDGIVRVFSANPDRQA 231 (557)
Q Consensus 192 -~~~~~~~~v~~v~~~p~g~--l~sg~~Dg~I~iwd~~~~~~~ 231 (557)
....|...|++++|+|++. |++|+.||+|++|++...+..
T Consensus 297 ~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~~~~~ 339 (345)
T 3fm0_A 297 HLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQRPEGL 339 (345)
T ss_dssp EETTSSSSCEEEEEECSSSTTEEEEEETTSCEEEEEECC----
T ss_pred eecccccCcEeEeEEeCCCceEEEEcCCCCcEEEEEecCCCCc
Confidence 1135788999999999874 889999999999999876644
No 45
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.98 E-value=5.4e-32 Score=286.17 Aligned_cols=271 Identities=16% Similarity=0.175 Sum_probs=204.8
Q ss_pred cEEEEEeccCcccEEEEEEcCC-Cc-EEEEECCCcEEEEcCCC------------------CCCCC-CCCEEEEEECCCe
Q psy7057 2 YKLSTALYGHSMDVRSLSVTPD-GC-ILSASRDKSAKLWKPND------------------LSPGA-KVNTLLSASWDMT 60 (557)
Q Consensus 2 ~kl~~~l~gH~~~V~~l~~spd-g~-l~sgs~Dg~V~iWd~~~------------------~~~~~-~~~~l~sgs~Dg~ 60 (557)
|++.+...+|...|+||+|+|. +. |++|+.||+|+|||+.. +.++| ++.+|++|+.|++
T Consensus 109 ~~~~~~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~ 188 (435)
T 4e54_B 109 YRILQKAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGT 188 (435)
T ss_dssp TTSCCEEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSC
T ss_pred eeecccCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCE
Confidence 3445667789999999999995 44 88999999999999865 56665 5789999999999
Q ss_pred EEEEECCCCeEEEEEccc--CCcEEEEEEcCCC-EEEEEECCCeEEEEeCCCcEEEEEeCCCCCEEEEEEeCCCe--EEE
Q psy7057 61 AKLWCLESQQCKLTIRQH--EMAVWGVIQLANG-IIVTGCADKTIKLHSEEGEFLKTLTGHTDCVRGLAVLNDTD--FVS 135 (557)
Q Consensus 61 i~iwd~~~~~~~~~l~~h--~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~~~~~~~l~~h~~~V~~l~~~~~~~--lvs 135 (557)
|++||++++........| ...+.+++|+|++ +|++|+.|+.|++||.+++.+..+.+|...|++++|+|++. |++
T Consensus 189 v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~s 268 (435)
T 4e54_B 189 TRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGKELWNLRMHKKKVTHVALNPCCDWFLAT 268 (435)
T ss_dssp EEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSCBCCCSBCCSSCEEEEEECTTCSSEEEE
T ss_pred EEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcceeEEEecccceEEeeeecCCCceEEEE
Confidence 999999876554444333 4467899999988 99999999999999998888889999999999999999864 669
Q ss_pred EECCCeEEEEECCCCeEEEE---EeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC---ceEeeCCc------cEE
Q psy7057 136 CSNDASIRVWDSTTGKCVHT---MYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ---NSFMIPAM------SVW 201 (557)
Q Consensus 136 ~s~Dg~I~vwd~~~~~~~~~---~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~---~~~~~~~~------~v~ 201 (557)
++.|++|++||+++.+.... ..+|...|.+++| ++.+|++++.|++|++||+... ..+..|.. .+.
T Consensus 269 ~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 348 (435)
T 4e54_B 269 ASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPI 348 (435)
T ss_dssp EETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCCSSSCCC
T ss_pred ecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEecccccccccceeE
Confidence 99999999999987664333 3579999999999 6789999999999999997765 22322221 233
Q ss_pred EEEEcCCCc-EEEEE------------cCCcEEEEecCCCCcchhHHHhcccceeEEEe-ccCCCceeEEEEeCCCcEEE
Q psy7057 202 AVAILPNSD-IVTGS------------SDGIVRVFSANPDRQAEDAVQAQYAEEVKKLK-SANEQEIGGVKVSDDGIVRV 267 (557)
Q Consensus 202 ~v~~~p~g~-l~sg~------------~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~-~~~~~~~~~vs~s~DG~Irv 267 (557)
.+.++|++. +++++ .++.|++|+..+++..... ...+...+..+. +.+. ...+++| .|+.|+|
T Consensus 349 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l-~~~~~~~v~s~~~fspd-g~~lasg-~d~~i~i 425 (435)
T 4e54_B 349 KAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQL-YDPESSGISSLNEFNPM-GDTLASA-MGYHILI 425 (435)
T ss_dssp BCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEE-CCSSCCCCCCEEEECTT-SSCEEEE-CSSEEEE
T ss_pred EEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEE-eCCCCCcEEEEEEECCC-CCEEEEE-cCCcEEE
Confidence 455666655 44433 3468999999887654322 223455566654 4444 4445665 4889999
Q ss_pred EecCCChh
Q psy7057 268 FSANPDRQ 275 (557)
Q Consensus 268 W~~~~~~~ 275 (557)
|++.+++.
T Consensus 426 W~~~~gk~ 433 (435)
T 4e54_B 426 WSQQEART 433 (435)
T ss_dssp CCCC----
T ss_pred EECCcCee
Confidence 99987754
No 46
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.98 E-value=4.7e-30 Score=259.99 Aligned_cols=221 Identities=24% Similarity=0.358 Sum_probs=191.7
Q ss_pred EEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC----------------CCCCCCCCEEEEEECCCeEEEEEC
Q psy7057 4 LSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND----------------LSPGAKVNTLLSASWDMTAKLWCL 66 (557)
Q Consensus 4 l~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~Dg~i~iwd~ 66 (557)
..+.|.+|...|++++|+|+++ |++|+.|++|++||+.+ +.+++++.+|++|+.|++|++||+
T Consensus 57 ~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~ 136 (319)
T 3frx_A 57 PVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTI 136 (319)
T ss_dssp EEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEET
T ss_pred cceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEEC
Confidence 3567899999999999999998 88999999999999976 567788999999999999999998
Q ss_pred CCCeEEEEEcccCCcEEEEEEcCC------C-EEEEEECCCeEEEEeC-CCcEEEEEeCCCCCEEEEEEeCCCe-EEEEE
Q psy7057 67 ESQQCKLTIRQHEMAVWGVIQLAN------G-IIVTGCADKTIKLHSE-EGEFLKTLTGHTDCVRGLAVLNDTD-FVSCS 137 (557)
Q Consensus 67 ~~~~~~~~l~~h~~~V~~l~~~~~------~-~l~sgs~dg~I~vwd~-~~~~~~~l~~h~~~V~~l~~~~~~~-lvs~s 137 (557)
+ ++++.++.+|...|.++.+.|. + .+++++.|++|++||. +......+.+|...|.+++|+|++. |++++
T Consensus 137 ~-~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~ 215 (319)
T 3frx_A 137 K-GQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAG 215 (319)
T ss_dssp T-SCEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEE
T ss_pred C-CCeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEe
Confidence 6 5678889999999999999984 3 7999999999999994 5667788999999999999999977 77999
Q ss_pred CCCeEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCCce---E--------eeCCccEEEEE
Q psy7057 138 NDASIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQNS---F--------MIPAMSVWAVA 204 (557)
Q Consensus 138 ~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~~~---~--------~~~~~~v~~v~ 204 (557)
.|++|++||+++++++.++.. ...|.+++| ++.+|++++. ..+++|++..... + ..+...+.+++
T Consensus 216 ~dg~i~iwd~~~~~~~~~~~~-~~~v~~~~~sp~~~~la~~~~-~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 293 (319)
T 3frx_A 216 KDGEIMLWNLAAKKAMYTLSA-QDEVFSLAFSPNRYWLAAATA-TGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLA 293 (319)
T ss_dssp TTCEEEEEETTTTEEEEEEEC-CSCEEEEEECSSSSEEEEEET-TEEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEE
T ss_pred CCCeEEEEECCCCcEEEEecC-CCcEEEEEEcCCCCEEEEEcC-CCcEEEEeCcCeeeeccCccccccccCcCcceeEEE
Confidence 999999999999999999875 468999999 5667777665 5599999765422 1 12345789999
Q ss_pred EcCCCc-EEEEEcCCcEEEEecCC
Q psy7057 205 ILPNSD-IVTGSSDGIVRVFSANP 227 (557)
Q Consensus 205 ~~p~g~-l~sg~~Dg~I~iwd~~~ 227 (557)
|+|+|+ |++|+.|+.|+||++.+
T Consensus 294 ~spdg~~l~sg~~Dg~i~vWd~~t 317 (319)
T 3frx_A 294 WSADGQTLFAGYTDNVIRVWQVMT 317 (319)
T ss_dssp ECTTSSEEEEEETTSCEEEEEEEE
T ss_pred ECCCCCEEEEeecCceEEEEEEee
Confidence 999999 88999999999999865
No 47
>2k89_A PLA2P, PLAP, phospholipase A-2-activating protein; ubiquitin binding, WD repeat, protein binding; NMR {Homo sapiens} PDB: 2k8a_A 2k8b_B 2k8c_B
Probab=99.98 E-value=2.1e-34 Score=219.13 Aligned_cols=66 Identities=48% Similarity=0.911 Sum_probs=58.9
Q ss_pred CCCCCCCCccceeeeeeeccCCCCCCCCCccCCCcccccccccccCCCceecccCCCCCcccccccCCChHHHHHhhhhc
Q psy7057 425 SKSKQGPTEYDFVFSVDIEEGKPPLKLPYNVSEDPWHAAQAFIHTHHLTSVDIEEGKPPLKLPYNVSEDPWHAAQAFIHT 504 (557)
Q Consensus 425 ~~~~~~g~~yd~vf~vd~~~g~p~~klp~n~~~~p~~~a~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 504 (557)
.|..|+||||||||||||+||.||||||||++||||+|||||| ++
T Consensus 7 ~k~~~~GkeYDyVFdVdi~dG~~~lkLpyN~~dnP~~aAqkFi-----------------------------------~~ 51 (80)
T 2k89_A 7 GKVLYEGKEFDYVFSIDVNEGGPSYKLPYNTSDDPWLTAYNFL-----------------------------------QK 51 (80)
T ss_dssp SCEEETTEEESEEEEECCSSSCSCEEEEECTTSCHHHHHHHHH-----------------------------------HH
T ss_pred CceeecCccccEEEEEEcCCCCcccccCccCCCCHHHHHHHHH-----------------------------------HH
Confidence 4557999999999999999999999999998888887777655 55
Q ss_pred CCCChHHHHHHHHHHHhcccC
Q psy7057 505 HHLSQMFLEQVANFIMTNSKS 525 (557)
Q Consensus 505 ~~l~~~~~~~v~~fi~~n~~~ 525 (557)
|+||++||||||+||++||++
T Consensus 52 n~Lp~~yldqI~~FI~~N~~~ 72 (80)
T 2k89_A 52 NDLNPMFLDQVAKFIIDNTKG 72 (80)
T ss_dssp HTCCTTHHHHHHHHHHHHHST
T ss_pred cCCCHHHHHHHHHHHHHhCCC
Confidence 799999999999999999974
No 48
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.98 E-value=7e-31 Score=272.75 Aligned_cols=227 Identities=19% Similarity=0.296 Sum_probs=197.7
Q ss_pred EEEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC-----------------------CCCCCC-CCEEEEEEC
Q psy7057 3 KLSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND-----------------------LSPGAK-VNTLLSASW 57 (557)
Q Consensus 3 kl~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~-----------------------~~~~~~-~~~l~sgs~ 57 (557)
+....+.+|...|.+++|+|+++ |++|+.|+.|++|++.. +.+.+. +..|++|+.
T Consensus 99 ~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~ 178 (380)
T 3iz6_a 99 QKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSG 178 (380)
T ss_dssp EEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECT
T ss_pred ccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECC
Confidence 45678999999999999999998 88999999999999753 233343 457999999
Q ss_pred CCeEEEEECCCCeEEEEE-----cccCCcEEEEEEcC-CC-EEEEEECCCeEEEEeC--CCcEEEEEeCCCCCEEEEEEe
Q psy7057 58 DMTAKLWCLESQQCKLTI-----RQHEMAVWGVIQLA-NG-IIVTGCADKTIKLHSE--EGEFLKTLTGHTDCVRGLAVL 128 (557)
Q Consensus 58 Dg~i~iwd~~~~~~~~~l-----~~h~~~V~~l~~~~-~~-~l~sgs~dg~I~vwd~--~~~~~~~l~~h~~~V~~l~~~ 128 (557)
|++|++||+.+++++..+ .+|...|.++++++ ++ .|++|+.|++|++||. .+.++..+.+|...|.+++|+
T Consensus 179 D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~ 258 (380)
T 3iz6_a 179 DQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFF 258 (380)
T ss_dssp TSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEEC
T ss_pred CCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEe
Confidence 999999999999998887 67999999999987 44 9999999999999995 457788999999999999999
Q ss_pred CCCe-EEEEECCCeEEEEECCCCeEEEEEeCCCC-------cEEEEEE--cCCEEEEEeCCCeEEEEECCCC---ceE--
Q psy7057 129 NDTD-FVSCSNDASIRVWDSTTGKCVHTMYGHPN-------FIYSVAA--HGDLITSGGEDQCVCVYQNKAQ---NSF-- 193 (557)
Q Consensus 129 ~~~~-lvs~s~Dg~I~vwd~~~~~~~~~~~~h~~-------~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~---~~~-- 193 (557)
|++. |++|+.|++|++||+++++++..+..+.. .|.+++| ++.+|++|+.||.|++||.... ..+
T Consensus 259 p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~ 338 (380)
T 3iz6_a 259 PDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGT 338 (380)
T ss_dssp TTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECC
T ss_pred cCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEec
Confidence 9976 77999999999999999999988875532 4788998 7889999999999999997655 223
Q ss_pred --eeCCccEEEEEEcCCCc-EEEEEcCCcEEEEecCCCC
Q psy7057 194 --MIPAMSVWAVAILPNSD-IVTGSSDGIVRVFSANPDR 229 (557)
Q Consensus 194 --~~~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~ 229 (557)
..|...|++++|+|++. |++|+.|++|+||++...+
T Consensus 339 ~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~~~ 377 (380)
T 3iz6_a 339 LQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSGHR 377 (380)
T ss_dssp SCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECCSSS
T ss_pred ccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecCCCc
Confidence 46888999999999998 8999999999999998654
No 49
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.98 E-value=1.1e-29 Score=269.67 Aligned_cols=264 Identities=20% Similarity=0.308 Sum_probs=221.7
Q ss_pred cEEEEEeccCcccEEEEEEcCCCcEEEEECCCcEEEEcCCC----------------C--CCCCCCCEEEEEECCCeEEE
Q psy7057 2 YKLSTALYGHSMDVRSLSVTPDGCILSASRDKSAKLWKPND----------------L--SPGAKVNTLLSASWDMTAKL 63 (557)
Q Consensus 2 ~kl~~~l~gH~~~V~~l~~spdg~l~sgs~Dg~V~iWd~~~----------------~--~~~~~~~~l~sgs~Dg~i~i 63 (557)
.++...+.+|.+.|++++|+|++.|++|+.||+|++||+.+ + .+.+++.++++|+.|++|++
T Consensus 152 ~~~~~~~~~h~~~V~~l~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~v 231 (464)
T 3v7d_B 152 KKFLLQLSGHDGGVWALKYAHGGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHV 231 (464)
T ss_dssp TEEEEEECCCSSCEEEEEECSTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEE
T ss_pred CcEEEEEeCCCcCEEEEEEcCCCEEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEE
Confidence 35678899999999999999999899999999999999886 2 23356789999999999999
Q ss_pred EECCCCe-----------------------EEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEe-CCCcEEEEEeCC
Q psy7057 64 WCLESQQ-----------------------CKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHS-EEGEFLKTLTGH 118 (557)
Q Consensus 64 wd~~~~~-----------------------~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd-~~~~~~~~l~~h 118 (557)
||+.++. ....+.+|...|.++. +++ .+++|+.|+.|++|| .+++++..+.+|
T Consensus 232 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~ 309 (464)
T 3v7d_B 232 WKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVS--GHGNIVVSGSYDNTLIVWDVAQMKCLYILSGH 309 (464)
T ss_dssp EECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEE--EETTEEEEEETTSCEEEEETTTTEEEEEECCC
T ss_pred eeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEc--CCCCEEEEEeCCCeEEEEECCCCcEEEEecCC
Confidence 9998764 3567888999998884 444 999999999999999 577888999999
Q ss_pred CCCEEEEEEeCCCe-EEEEECCCeEEEEECCCCeEEEEEeCCCCcEEEEEEcCCEEEEEeCCCeEEEEECCCC-ceE-ee
Q psy7057 119 TDCVRGLAVLNDTD-FVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAAHGDLITSGGEDQCVCVYQNKAQ-NSF-MI 195 (557)
Q Consensus 119 ~~~V~~l~~~~~~~-lvs~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~l~s~s~Dg~I~iwd~~~~-~~~-~~ 195 (557)
...|.+++++|++. +++|+.|++|++||+++++++.++.+|...|.++++++.+|++++.|++|++||+.+. ... ..
T Consensus 310 ~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~ 389 (464)
T 3v7d_B 310 TDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSYH 389 (464)
T ss_dssp SSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred CCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCcEEEEEEcCCEEEEEeCCCcEEEEECCCCceeeeec
Confidence 99999999999965 7799999999999999999999999999999999999999999999999999998776 222 24
Q ss_pred CCccEEEEEEcCCCcEEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEec
Q psy7057 196 PAMSVWAVAILPNSDIVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSA 270 (557)
Q Consensus 196 ~~~~v~~v~~~p~g~l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~ 270 (557)
+...+..++++|++.+++++.||.|++|++.+++..... ...+...+..+.+. ....+++++.||.+.+|-+
T Consensus 390 ~~~~~~~~~~~~~~~~l~~~~dg~i~iwd~~~g~~~~~~-~~~~~~~v~~v~~~--~~~l~~~~~~~g~~~i~~l 461 (464)
T 3v7d_B 390 HTNLSAITTFYVSDNILVSGSENQFNIYNLRSGKLVHAN-ILKDADQIWSVNFK--GKTLVAAVEKDGQSFLEIL 461 (464)
T ss_dssp CTTCCCEEEEEECSSEEEEEETTEEEEEETTTCCEEESC-TTTTCSEEEEEEEE--TTEEEEEEEETTEEEEEEE
T ss_pred CCCCccEEEEEeCCCEEEEecCCeEEEEECCCCcEEehh-hccCCCcEEEEEec--CCEEEEEEEeCCeEEEEEe
Confidence 566788899999999444444999999999988766432 23356778888875 4555677788887776654
No 50
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.98 E-value=9.1e-30 Score=265.55 Aligned_cols=213 Identities=31% Similarity=0.501 Sum_probs=186.7
Q ss_pred cEEEEEEcCCCc-EEEEECCCcEEEEcCCC----------------CCCCCCCCEEEEEECCCeEEEEECCCCeEEEEEc
Q psy7057 14 DVRSLSVTPDGC-ILSASRDKSAKLWKPND----------------LSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIR 76 (557)
Q Consensus 14 ~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~ 76 (557)
.|++++|+|+|+ |++|+.|++|++||+.+ +.+++++.+|++++.|++|++||+.++++...+.
T Consensus 125 ~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~ 204 (393)
T 1erj_A 125 YIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLS 204 (393)
T ss_dssp BEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred eEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEE
Confidence 499999999998 88999999999999876 6678889999999999999999999999888776
Q ss_pred ccCCcEEEEEEcC-CC-EEEEEECCCeEEEEe-CCCcEEEEE-------eCCCCCEEEEEEeCCCe-EEEEECCCeEEEE
Q psy7057 77 QHEMAVWGVIQLA-NG-IIVTGCADKTIKLHS-EEGEFLKTL-------TGHTDCVRGLAVLNDTD-FVSCSNDASIRVW 145 (557)
Q Consensus 77 ~h~~~V~~l~~~~-~~-~l~sgs~dg~I~vwd-~~~~~~~~l-------~~h~~~V~~l~~~~~~~-lvs~s~Dg~I~vw 145 (557)
+...+.+++++| ++ .|++|+.|++|++|| .++..+..+ .+|...|.+++|+|++. |++++.|++|++|
T Consensus 205 -~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~w 283 (393)
T 1erj_A 205 -IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLW 283 (393)
T ss_dssp -CSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred -cCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEE
Confidence 567899999999 66 999999999999999 456666665 57999999999999976 7799999999999
Q ss_pred ECCC------------CeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC---ceEeeCCccEEEEEEcC-
Q psy7057 146 DSTT------------GKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ---NSFMIPAMSVWAVAILP- 207 (557)
Q Consensus 146 d~~~------------~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~---~~~~~~~~~v~~v~~~p- 207 (557)
|+++ +.+..++.+|...|.++++ ++.+|++|+.|+.|++||..+. ..+..|...|.++++++
T Consensus 284 d~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~~v~~~~~ 363 (393)
T 1erj_A 284 NLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANG 363 (393)
T ss_dssp EC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSS
T ss_pred ECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCCCCCEEEEEecCC
Confidence 9875 3456778899999999999 6789999999999999997765 56778999999999987
Q ss_pred -----CCc-EEEEEcCCcEEEEecCC
Q psy7057 208 -----NSD-IVTGSSDGIVRVFSANP 227 (557)
Q Consensus 208 -----~g~-l~sg~~Dg~I~iwd~~~ 227 (557)
++. |++|+.||+|+||++..
T Consensus 364 ~~~~p~~~~l~sgs~Dg~i~iW~~~~ 389 (393)
T 1erj_A 364 SSLGPEYNVFATGSGDCKARIWKYKK 389 (393)
T ss_dssp CTTCTTCEEEEEEETTSEEEEEEEEE
T ss_pred cCcCCCCCEEEEECCCCcEEECcccc
Confidence 456 89999999999999864
No 51
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.98 E-value=2.2e-30 Score=273.61 Aligned_cols=258 Identities=24% Similarity=0.316 Sum_probs=212.3
Q ss_pred ccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC--------------CCCCCCCCEEEEEECCCeEEEEECCCCeEEE
Q psy7057 9 YGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND--------------LSPGAKVNTLLSASWDMTAKLWCLESQQCKL 73 (557)
Q Consensus 9 ~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~--------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~ 73 (557)
.+|...|.|+++ ++. |++|+.||+|++||+.+ .+...+++.|++|+.||+|++||+.+++++.
T Consensus 130 ~~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~l~sg~~dg~i~vwd~~~~~~~~ 207 (435)
T 1p22_A 130 SETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNTGEMLN 207 (435)
T ss_dssp CSSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEECCSSEEEEEETTSCEEEEESSSCCEEE
T ss_pred cCCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEECCCEEEEEcCCCeEEEEECCCCcEEE
Confidence 457788999887 565 99999999999999876 1122368899999999999999999999999
Q ss_pred EEcccCCcEEEEEEcCCCEEEEEECCCeEEEEeC-CCcE---EEEEeCCCCCEEEEEEeCCCeEEEEECCCeEEEEECCC
Q psy7057 74 TIRQHEMAVWGVIQLANGIIVTGCADKTIKLHSE-EGEF---LKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTT 149 (557)
Q Consensus 74 ~l~~h~~~V~~l~~~~~~~l~sgs~dg~I~vwd~-~~~~---~~~l~~h~~~V~~l~~~~~~~lvs~s~Dg~I~vwd~~~ 149 (557)
++.+|...|.+++|++ +.+++|+.|+.|++||. ++.. ...+.+|...|.++++. ...+++|+.|++|++||+++
T Consensus 208 ~~~~h~~~v~~l~~~~-~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~l~s~~~dg~i~vwd~~~ 285 (435)
T 1p22_A 208 TLIHHCEAVLHLRFNN-GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD-DKYIVSASGDRTIKVWNTST 285 (435)
T ss_dssp EECCCCSCEEEEECCT-TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEE-TTEEEEEETTSEEEEEETTT
T ss_pred EEcCCCCcEEEEEEcC-CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEeC-CCEEEEEeCCCeEEEEECCc
Confidence 9999999999999974 59999999999999994 3333 36778999999999993 35688999999999999999
Q ss_pred CeEEEEEeCCCCcEEEEEEcCCEEEEEeCCCeEEEEECCCC---ceEeeCCccEEEEEEcCCCc-EEEEEcCCcEEEEec
Q psy7057 150 GKCVHTMYGHPNFIYSVAAHGDLITSGGEDQCVCVYQNKAQ---NSFMIPAMSVWAVAILPNSD-IVTGSSDGIVRVFSA 225 (557)
Q Consensus 150 ~~~~~~~~~h~~~V~~l~~~~~~l~s~s~Dg~I~iwd~~~~---~~~~~~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~ 225 (557)
++++.++.+|...|.++++++..+++|+.|+.|++||+++. ..+..|...|.++++ ++. +++|+.||.|++||+
T Consensus 286 ~~~~~~~~~~~~~v~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~sg~~dg~i~vwd~ 363 (435)
T 1p22_A 286 CEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDL 363 (435)
T ss_dssp CCEEEEEECCSSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEEH
T ss_pred CcEEEEEcCCCCcEEEEEeCCCEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEe--cCCEEEEEeCCCcEEEEEC
Confidence 99999999999999999999999999999999999998765 566778889999999 455 999999999999998
Q ss_pred CCCCcc-------hhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecCCChh
Q psy7057 226 NPDRQA-------EDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPDRQ 275 (557)
Q Consensus 226 ~~~~~~-------~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~~~~ 275 (557)
...... .......|...+..+.+ +...+++++.||+|++|++.....
T Consensus 364 ~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~---~~~~l~s~s~Dg~i~iwd~~~~~~ 417 (435)
T 1p22_A 364 VAALDPRAPAGTLCLRTLVEHSGRVFRLQF---DEFQIVSSSHDDTILIWDFLNDPA 417 (435)
T ss_dssp HHHTSTTSCTTTTEEEEECCCSSCCCCEEE---CSSCEEECCSSSEEEEEC------
T ss_pred CCCCCccccccchheeeccCCCCCeEEEEe---CCCEEEEEeCCCEEEEEECCCCCC
Confidence 654311 11223456667777766 344689999999999999886543
No 52
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.97 E-value=8.5e-30 Score=256.23 Aligned_cols=224 Identities=24% Similarity=0.457 Sum_probs=196.6
Q ss_pred EEEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC----------------CCCCCCCCEEEEEECCCeEEEEE
Q psy7057 3 KLSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND----------------LSPGAKVNTLLSASWDMTAKLWC 65 (557)
Q Consensus 3 kl~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~Dg~i~iwd 65 (557)
++...+.+|...|.+++|+|+++ |++|+.|+.|++||+.+ +.+++++++|++|+.|++|++||
T Consensus 56 ~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd 135 (312)
T 4ery_A 56 KFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 135 (312)
T ss_dssp CEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEE
T ss_pred ccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEE
Confidence 45678899999999999999998 88999999999999876 56778899999999999999999
Q ss_pred CCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEe-CCCcEEEEEe-CCCCCEEEEEEeCCCe-EEEEECCCe
Q psy7057 66 LESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHS-EEGEFLKTLT-GHTDCVRGLAVLNDTD-FVSCSNDAS 141 (557)
Q Consensus 66 ~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd-~~~~~~~~l~-~h~~~V~~l~~~~~~~-lvs~s~Dg~ 141 (557)
+++++++..+..|...|.+++|+|++ .+++++.|+.|++|| .+++.+..+. .+...+.+++|+|++. +++++.|+.
T Consensus 136 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~ 215 (312)
T 4ery_A 136 VKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNT 215 (312)
T ss_dssp TTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTE
T ss_pred CCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCe
Confidence 99999999999999999999999988 999999999999999 4566666654 5667899999999976 779999999
Q ss_pred EEEEECCCCeEEEEEeCCCCcEEEE--EE---cCCEEEEEeCCCeEEEEECCCC---ceEeeCCccEEEEEEcCCCc-EE
Q psy7057 142 IRVWDSTTGKCVHTMYGHPNFIYSV--AA---HGDLITSGGEDQCVCVYQNKAQ---NSFMIPAMSVWAVAILPNSD-IV 212 (557)
Q Consensus 142 I~vwd~~~~~~~~~~~~h~~~V~~l--~~---~~~~l~s~s~Dg~I~iwd~~~~---~~~~~~~~~v~~v~~~p~g~-l~ 212 (557)
|++||+++++++..+.+|...+.++ .+ ++.+|++|+.|+.|++||+.+. ..+..|...|.+++|+|++. ++
T Consensus 216 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~ 295 (312)
T 4ery_A 216 LKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIA 295 (312)
T ss_dssp EEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCCEEEEECCCSSCEEEEEECSSSSEEE
T ss_pred EEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCchhhhhhhccCCcEEEEeecCcCCceE
Confidence 9999999999999999887654322 22 5779999999999999998765 56778999999999999998 67
Q ss_pred EEE--cCCcEEEEecC
Q psy7057 213 TGS--SDGIVRVFSAN 226 (557)
Q Consensus 213 sg~--~Dg~I~iwd~~ 226 (557)
+++ .|++|++|+.+
T Consensus 296 s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 296 SAALENDKTIKLWKSD 311 (312)
T ss_dssp EEECTTTCCEEEEECC
T ss_pred EEEccCCccEEEecCC
Confidence 776 69999999864
No 53
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.97 E-value=1.1e-29 Score=268.83 Aligned_cols=262 Identities=26% Similarity=0.409 Sum_probs=221.3
Q ss_pred EEEEEeccCcccE-EEEEEcCCCc-EEEEECCCcEEEEcCCC----------------CCCCCCCCEEEEEECCCeEEEE
Q psy7057 3 KLSTALYGHSMDV-RSLSVTPDGC-ILSASRDKSAKLWKPND----------------LSPGAKVNTLLSASWDMTAKLW 64 (557)
Q Consensus 3 kl~~~l~gH~~~V-~~l~~spdg~-l~sgs~Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~Dg~i~iw 64 (557)
+..+.|.+|.+.| .|+.+ ++. |++|+.||+|++||+.+ +.+ .++.+++|+.|++|++|
T Consensus 109 ~~~~~l~~h~~~v~~~~~~--~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~dg~i~vw 184 (445)
T 2ovr_B 109 KSPKVLKGHDDHVITCLQF--CGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQM--RDNIIISGSTDRTLKVW 184 (445)
T ss_dssp CCCEEEECSTTSCEEEEEE--ETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEE--ETTEEEEEETTSCEEEE
T ss_pred ceeEEecccCCCcEEEEEE--cCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEe--cCCEEEEEeCCCeEEEE
Confidence 3457899999875 55555 566 99999999999999876 222 36799999999999999
Q ss_pred ECCCCeEEEEEcccCCcEEEEEEcCCCEEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeCCCeEEEEECCCeEE
Q psy7057 65 CLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDTDFVSCSNDASIR 143 (557)
Q Consensus 65 d~~~~~~~~~l~~h~~~V~~l~~~~~~~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~~~~lvs~s~Dg~I~ 143 (557)
|+.+++++..+.+|...|.++.+. ...+++|+.|++|++|| .+++++..+.+|...|.++++ ....+++++.|+.|+
T Consensus 185 d~~~~~~~~~~~~h~~~v~~~~~~-~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~dg~i~ 262 (445)
T 2ovr_B 185 NAETGECIHTLYGHTSTVRCMHLH-EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY-DGRRVVSGAYDFMVK 262 (445)
T ss_dssp ETTTTEEEEEECCCSSCEEEEEEE-TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE-CSSCEEEEETTSCEE
T ss_pred ECCcCcEEEEECCCCCcEEEEEec-CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE-CCCEEEEEcCCCEEE
Confidence 999999999999999999999996 34799999999999999 567888999999999999999 345588999999999
Q ss_pred EEECCCCeEEEEEeCCCCcEEEEEEcCCEEEEEeCCCeEEEEECCCC---ceEeeCCccEEEEEEcCCCcEEEEEcCCcE
Q psy7057 144 VWDSTTGKCVHTMYGHPNFIYSVAAHGDLITSGGEDQCVCVYQNKAQ---NSFMIPAMSVWAVAILPNSDIVTGSSDGIV 220 (557)
Q Consensus 144 vwd~~~~~~~~~~~~h~~~V~~l~~~~~~l~s~s~Dg~I~iwd~~~~---~~~~~~~~~v~~v~~~p~g~l~sg~~Dg~I 220 (557)
+||+++++++.++.+|...|.++++++..+++++.|+.|++||+++. ..+..|...+.++.+.++ .+++|+.||.|
T Consensus 263 iwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~-~l~~~~~dg~i 341 (445)
T 2ovr_B 263 VWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDN-ILVSGNADSTV 341 (445)
T ss_dssp EEEGGGTEEEEEECCCSSCEEEEEECSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEEETT-EEEEEETTSCE
T ss_pred EEECCCCcEeEEecCCCCceEEEEECCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEEEeCC-EEEEEeCCCeE
Confidence 99999999999999999999999999999999999999999998766 556678888888887532 38999999999
Q ss_pred EEEecCCCCcchhHH-HhcccceeEEEeccCCCceeEEEEeCCCcEEEEecCCCh
Q psy7057 221 RVFSANPDRQAEDAV-QAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPDR 274 (557)
Q Consensus 221 ~iwd~~~~~~~~~~~-~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~~~ 274 (557)
++||+.+++...... ...+...+..+.+. +..+++++.||.|++|++..++
T Consensus 342 ~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~---~~~l~s~~~dg~v~iwd~~~~~ 393 (445)
T 2ovr_B 342 KIWDIKTGQCLQTLQGPNKHQSAVTCLQFN---KNFVITSSDDGTVKLWDLKTGE 393 (445)
T ss_dssp EEEETTTCCEEEEECSTTSCSSCEEEEEEC---SSEEEEEETTSEEEEEETTTCC
T ss_pred EEEECCCCcEEEEEccCCCCCCCEEEEEEC---CCEEEEEeCCCeEEEEECCCCc
Confidence 999998776543222 22366677777774 3578999999999999987654
No 54
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.97 E-value=5.7e-30 Score=267.46 Aligned_cols=267 Identities=16% Similarity=0.186 Sum_probs=221.6
Q ss_pred eccCccc--EEEEEEcCCCcEEEEECCCcEEEEcCCC-----------------CCCCCCCCEEEEEECCCeEEEEECCC
Q psy7057 8 LYGHSMD--VRSLSVTPDGCILSASRDKSAKLWKPND-----------------LSPGAKVNTLLSASWDMTAKLWCLES 68 (557)
Q Consensus 8 l~gH~~~--V~~l~~spdg~l~sgs~Dg~V~iWd~~~-----------------~~~~~~~~~l~sgs~Dg~i~iwd~~~ 68 (557)
..+|... +.+++|++ +.+++++.|+.|++|++.+ +++++++.+|++|+.||.|++||+.+
T Consensus 87 ~~~~~~~~~~~~~~~s~-~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~ 165 (401)
T 4aez_A 87 APGIIDDYYLNLLDWSN-LNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVES 165 (401)
T ss_dssp CTTCCCCTTCBCEEECT-TSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred CCCCcCCceEEEEeecC-CCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcC
Confidence 3466655 44566765 3489999999999999876 66788899999999999999999999
Q ss_pred CeEEEEEcccCCcEEEEEEcCCCEEEEEECCCeEEEEeC--CCcEEEEEeCCCCCEEEEEEeCCCe-EEEEECCCeEEEE
Q psy7057 69 QQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHSE--EGEFLKTLTGHTDCVRGLAVLNDTD-FVSCSNDASIRVW 145 (557)
Q Consensus 69 ~~~~~~l~~h~~~V~~l~~~~~~~l~sgs~dg~I~vwd~--~~~~~~~l~~h~~~V~~l~~~~~~~-lvs~s~Dg~I~vw 145 (557)
++.+..+.+|...|.+++|. ...+++|+.|+.|++||. ....+..+.+|...|.+++|+|++. |++++.|+.|++|
T Consensus 166 ~~~~~~~~~~~~~v~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iw 244 (401)
T 4aez_A 166 QTKLRTMAGHQARVGCLSWN-RHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIW 244 (401)
T ss_dssp CCEEEEECCCSSCEEEEEEE-TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred CeEEEEecCCCCceEEEEEC-CCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEc
Confidence 99999999999999999994 349999999999999995 4667888999999999999999976 7799999999999
Q ss_pred ECCCCeEEEEEeCCCCcEEEEEEc--C-CEEEEEe--CCCeEEEEECCCCc--eEeeCCccEEEEEEcCCCc-EEEE--E
Q psy7057 146 DSTTGKCVHTMYGHPNFIYSVAAH--G-DLITSGG--EDQCVCVYQNKAQN--SFMIPAMSVWAVAILPNSD-IVTG--S 215 (557)
Q Consensus 146 d~~~~~~~~~~~~h~~~V~~l~~~--~-~~l~s~s--~Dg~I~iwd~~~~~--~~~~~~~~v~~v~~~p~g~-l~sg--~ 215 (557)
|+++++++..+..|...|.+++|. + .++++++ .|+.|++||+.+.. ....+...|.+++|+|++. ++++ +
T Consensus 245 d~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~g~ 324 (401)
T 4aez_A 245 DARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDAGSQVTSLIWSPHSKEIMSTHGF 324 (401)
T ss_dssp ETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECT
T ss_pred cCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEEECCCCCeEEEEeec
Confidence 999999999999999999999993 3 4677765 79999999987662 2234567899999999998 6664 3
Q ss_pred cCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecCCChhhH
Q psy7057 216 SDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPDRQAE 277 (557)
Q Consensus 216 ~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~~~~~~ 277 (557)
.||.|++|++.+...........+...+..+.+.+... .+++++.||.|++|++..++...
T Consensus 325 ~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~-~l~s~~~dg~i~iw~~~~~~~~~ 385 (401)
T 4aez_A 325 PDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGR-ILSTAASDENLKFWRVYDGDHVK 385 (401)
T ss_dssp TTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSS-EEEEECTTSEEEEEECCC-----
T ss_pred CCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCC-EEEEEeCCCcEEEEECCCCcccc
Confidence 89999999998865554444556777888888877654 68999999999999998876543
No 55
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.97 E-value=6.6e-30 Score=290.30 Aligned_cols=270 Identities=16% Similarity=0.210 Sum_probs=234.8
Q ss_pred cEEEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC----------------CCCCCCCCEEEEEECCCeEEEE
Q psy7057 2 YKLSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND----------------LSPGAKVNTLLSASWDMTAKLW 64 (557)
Q Consensus 2 ~kl~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~Dg~i~iw 64 (557)
+++.+.|.+|.+.|++++|+|++. |++++.||+|+|||+.+ +.+++++.+|++++.|+.|++|
T Consensus 3 l~~~~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw 82 (814)
T 3mkq_A 3 LDIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVF 82 (814)
T ss_dssp CCCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEE
T ss_pred cccceeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEE
Confidence 567899999999999999999998 88999999999999876 6778889999999999999999
Q ss_pred ECCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeCC-C-cEEEEEeCCCCCEEEEEEeC-CCe-EEEEECC
Q psy7057 65 CLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSEE-G-EFLKTLTGHTDCVRGLAVLN-DTD-FVSCSND 139 (557)
Q Consensus 65 d~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~-~-~~~~~l~~h~~~V~~l~~~~-~~~-lvs~s~D 139 (557)
++.+++.+..+.+|...|++++|+|++ .|++++.|++|++|+.. + .....+.+|...|.+++|+| ++. +++++.|
T Consensus 83 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d 162 (814)
T 3mkq_A 83 NYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLD 162 (814)
T ss_dssp ETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETT
T ss_pred ECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCC
Confidence 999999999999999999999999999 89999999999999943 3 66788889999999999999 554 7799999
Q ss_pred CeEEEEECCCCeEEEEEeCCC-CcEEEEEE----cCCEEEEEeCCCeEEEEECCCC---ceEeeCCccEEEEEEcCCCc-
Q psy7057 140 ASIRVWDSTTGKCVHTMYGHP-NFIYSVAA----HGDLITSGGEDQCVCVYQNKAQ---NSFMIPAMSVWAVAILPNSD- 210 (557)
Q Consensus 140 g~I~vwd~~~~~~~~~~~~h~-~~V~~l~~----~~~~l~s~s~Dg~I~iwd~~~~---~~~~~~~~~v~~v~~~p~g~- 210 (557)
++|++||+.+++....+..+. ..+.++++ ++.+|++++.|+.|++||..+. ..+..|...|.+++|+|++.
T Consensus 163 g~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 242 (814)
T 3mkq_A 163 RTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPI 242 (814)
T ss_dssp SEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSE
T ss_pred CeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCE
Confidence 999999999888777777654 88999998 5679999999999999998766 56667888999999999998
Q ss_pred EEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecCCC
Q psy7057 211 IVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPD 273 (557)
Q Consensus 211 l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~~ 273 (557)
+++++.||.|++|+..+.+.... ...+...+..+.+.+.....+++++.|+.+.+|++...
T Consensus 243 l~~~~~dg~v~vwd~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (814)
T 3mkq_A 243 IISGSEDGTLKIWNSSTYKVEKT--LNVGLERSWCIATHPTGRKNYIASGFDNGFTVLSLGND 303 (814)
T ss_dssp EEEEETTSCEEEEETTTCSEEEE--ECCSSSSEEEEEECTTCGGGEEEEEETTEEEEEECSCC
T ss_pred EEEEeCCCeEEEEECCCCcEEEE--eecCCCcEEEEEEccCCCceEEEEEeCCCEEEEEcCCC
Confidence 88999999999999987665432 23455678888888877665566777888899987654
No 56
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.97 E-value=4.5e-29 Score=264.08 Aligned_cols=266 Identities=27% Similarity=0.398 Sum_probs=226.9
Q ss_pred EEEEEeccCcccEEEEEEcCCCcEEEEECCCcEEEEcCCC--------------CCCCCCCCEEEEEECCCeEEEEECCC
Q psy7057 3 KLSTALYGHSMDVRSLSVTPDGCILSASRDKSAKLWKPND--------------LSPGAKVNTLLSASWDMTAKLWCLES 68 (557)
Q Consensus 3 kl~~~l~gH~~~V~~l~~spdg~l~sgs~Dg~V~iWd~~~--------------~~~~~~~~~l~sgs~Dg~i~iwd~~~ 68 (557)
++...+.+|.+.|++++|++ ..|++|+.||+|++||+.+ .+...+++.+++|+.|++|++||+.+
T Consensus 150 ~~~~~~~~h~~~v~~~~~~~-~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~l~s~s~dg~i~~wd~~~ 228 (445)
T 2ovr_B 150 KCLRTLVGHTGGVWSSQMRD-NIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIET 228 (445)
T ss_dssp CEEEECCCCSSCEEEEEEET-TEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEESSS
T ss_pred cEEEEEcCCCCCEEEEEecC-CEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEecCCEEEEEeCCCEEEEEECCC
Confidence 56788999999999999983 3599999999999999876 11112367899999999999999999
Q ss_pred CeEEEEEcccCCcEEEEEEcCCCEEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeCCCeEEEEECCCeEEEEEC
Q psy7057 69 QQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDS 147 (557)
Q Consensus 69 ~~~~~~l~~h~~~V~~l~~~~~~~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~~~~lvs~s~Dg~I~vwd~ 147 (557)
++++..+.+|...|.++.+ ....+++|+.|+.|++|| .+++++..+.+|...|.++++ ....+++++.|++|++||+
T Consensus 229 ~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~d~~i~i~d~ 306 (445)
T 2ovr_B 229 GQCLHVLMGHVAAVRCVQY-DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF-DGIHVVSGSLDTSIRVWDV 306 (445)
T ss_dssp CCEEEEEECCSSCEEEEEE-CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE-CSSEEEEEETTSCEEEEET
T ss_pred CcEEEEEcCCcccEEEEEE-CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEE-CCCEEEEEeCCCeEEEEEC
Confidence 9999999999999999999 334899999999999999 567888999999999999999 3455889999999999999
Q ss_pred CCCeEEEEEeCCCCcEEEEEEcCCEEEEEeCCCeEEEEECCCC---ceEee---CCccEEEEEEcCCCcEEEEEcCCcEE
Q psy7057 148 TTGKCVHTMYGHPNFIYSVAAHGDLITSGGEDQCVCVYQNKAQ---NSFMI---PAMSVWAVAILPNSDIVTGSSDGIVR 221 (557)
Q Consensus 148 ~~~~~~~~~~~h~~~V~~l~~~~~~l~s~s~Dg~I~iwd~~~~---~~~~~---~~~~v~~v~~~p~g~l~sg~~Dg~I~ 221 (557)
++++++.++.+|...+.++.++++.+++++.|+.|++||+++. ..+.. |...|.++++++ ..+++|+.||.|+
T Consensus 307 ~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~l~s~~~dg~v~ 385 (445)
T 2ovr_B 307 ETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNK-NFVITSSDDGTVK 385 (445)
T ss_dssp TTCCEEEEECCCCSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEECS-SEEEEEETTSEEE
T ss_pred CCCCEEEEEcCCcccEEEEEEeCCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEECC-CEEEEEeCCCeEE
Confidence 9999999999999999999999999999999999999998765 34443 677899999964 2399999999999
Q ss_pred EEecCCCCcchhH---HHhcccceeEEEeccCCCceeEEEEeCCCc----EEEEecCCC
Q psy7057 222 VFSANPDRQAEDA---VQAQYAEEVKKLKSANEQEIGGVKVSDDGI----VRVFSANPD 273 (557)
Q Consensus 222 iwd~~~~~~~~~~---~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~----IrvW~~~~~ 273 (557)
+|++.+++..... ....+...+..+.+.+. ...+++++.||+ |+||+++.+
T Consensus 386 iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~-~~~la~~~~dg~~~~~l~v~df~~~ 443 (445)
T 2ovr_B 386 LWDLKTGEFIRNLVTLESGGSGGVVWRIRASNT-KLVCAVGSRNGTEETKLLVLDFDVD 443 (445)
T ss_dssp EEETTTCCEEEEEEECTTGGGTCEEEEEEECSS-EEEEEEECSSSSSCCEEEEEECCCC
T ss_pred EEECCCCceeeeeeccccCCCCceEEEEEecCC-EEEEEEcccCCCCccEEEEEECCCC
Confidence 9999987765332 22456677888888764 456889999998 999999865
No 57
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.97 E-value=7.4e-30 Score=261.01 Aligned_cols=221 Identities=21% Similarity=0.282 Sum_probs=186.0
Q ss_pred EEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC----------------CCCCCCCCEEEEEECCCeEEEEEC
Q psy7057 4 LSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND----------------LSPGAKVNTLLSASWDMTAKLWCL 66 (557)
Q Consensus 4 l~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~Dg~i~iwd~ 66 (557)
....+.+|...|++++|+|++. |++|+.|++|++||+.+ +++++++.+|++++.|++|++||+
T Consensus 68 ~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~ 147 (343)
T 2xzm_R 68 PHKALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNI 147 (343)
T ss_dssp EEEEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEES
T ss_pred ccchhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEec
Confidence 4567899999999999999998 88999999999999876 677889999999999999999999
Q ss_pred CCCeEEEEEc---ccCCcEEEEEEcCCC-----------EEEEEECCCeEEEEeCCCcEEEEEeCCCCCEEEEEEeCCCe
Q psy7057 67 ESQQCKLTIR---QHEMAVWGVIQLANG-----------IIVTGCADKTIKLHSEEGEFLKTLTGHTDCVRGLAVLNDTD 132 (557)
Q Consensus 67 ~~~~~~~~l~---~h~~~V~~l~~~~~~-----------~l~sgs~dg~I~vwd~~~~~~~~l~~h~~~V~~l~~~~~~~ 132 (557)
.. .....+. .|...|.+++|+|++ .+++++.|++|++||........+.+|...|.+++|+|++.
T Consensus 148 ~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~h~~~v~~~~~s~~g~ 226 (343)
T 2xzm_R 148 LG-ECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNFQIRYTFKAHESNVNHLSISPNGK 226 (343)
T ss_dssp SS-CEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETTTEEEEEEECCSSCEEEEEECTTSS
T ss_pred cC-CceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCCCceeEEEcCccccceEEEECCCCC
Confidence 74 4444443 689999999999964 79999999999999988888889999999999999999987
Q ss_pred -EEEEECCCeEEEEECCC-CeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCCc-----eEe---------
Q psy7057 133 -FVSCSNDASIRVWDSTT-GKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQN-----SFM--------- 194 (557)
Q Consensus 133 -lvs~s~Dg~I~vwd~~~-~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~~-----~~~--------- 194 (557)
|++|+.|++|++||++. ..+...+. +...|.+++| ++.++ +++.|+.|++|++.+.. .+.
T Consensus 227 ~l~sgs~dg~v~iwd~~~~~~~~~~~~-~~~~v~~v~~sp~~~~l-a~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~ 304 (343)
T 2xzm_R 227 YIATGGKDKKLLIWDILNLTYPQREFD-AGSTINQIAFNPKLQWV-AVGTDQGVKIFNLMTQSKAPVCTIEAEPITKAEG 304 (343)
T ss_dssp EEEEEETTCEEEEEESSCCSSCSEEEE-CSSCEEEEEECSSSCEE-EEEESSCEEEEESSSCCSCSEEECCCCSGGGBTT
T ss_pred EEEEEcCCCeEEEEECCCCcccceeec-CCCcEEEEEECCCCCEE-EEECCCCEEEEEeCCCCCCceEEeecCcchhhhh
Confidence 77999999999999954 44444443 5567999999 44444 56678889999975441 222
Q ss_pred --eCCccEEEEEEcCCCc-EEEEEcCCcEEEEecCC
Q psy7057 195 --IPAMSVWAVAILPNSD-IVTGSSDGIVRVFSANP 227 (557)
Q Consensus 195 --~~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~ 227 (557)
.|...|.+++|+|++. |++|+.||+|++|++.+
T Consensus 305 ~~~~~~~v~~~~~sp~g~~l~sg~~Dg~v~~w~~~~ 340 (343)
T 2xzm_R 305 QKGKNPQCTSLAWNALGKKLFAGFTDGVIRTFSFET 340 (343)
T ss_dssp BCCSCCCEEEEEECSSSCCEEEEETTSEEEEEEEEE
T ss_pred hcCCCCceEEEEECCCCCeEEEecCCceEEEEEEEc
Confidence 4667899999999998 99999999999999764
No 58
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.97 E-value=7.9e-30 Score=265.54 Aligned_cols=261 Identities=15% Similarity=0.166 Sum_probs=225.4
Q ss_pred cCcccEEEEEEcCCCc--EEEEECCCcEEEEcC----CC--------------------------------CCCCCCCCE
Q psy7057 10 GHSMDVRSLSVTPDGC--ILSASRDKSAKLWKP----ND--------------------------------LSPGAKVNT 51 (557)
Q Consensus 10 gH~~~V~~l~~spdg~--l~sgs~Dg~V~iWd~----~~--------------------------------~~~~~~~~~ 51 (557)
.|.+.|++++|+|++. |++|+.||.|++|++ .+ +.+++++.+
T Consensus 43 ~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 122 (425)
T 1r5m_A 43 VKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGNS 122 (425)
T ss_dssp EECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSSE
T ss_pred eccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCCE
Confidence 4569999999999987 779999999999999 32 456778999
Q ss_pred EEEEECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEe-CCCcEEEEEeCCCCC--------
Q psy7057 52 LLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHS-EEGEFLKTLTGHTDC-------- 121 (557)
Q Consensus 52 l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~-------- 121 (557)
|++++.|+.|++|+ .+++.+..+..|...|.+++|+|++ .|++++.|+.|++|| .+++.+..+..+...
T Consensus 123 l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 201 (425)
T 1r5m_A 123 IVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINAEN 201 (425)
T ss_dssp EEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC-----------
T ss_pred EEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccceeecc
Confidence 99999999999999 6778899999999999999999988 899999999999999 467778888877776
Q ss_pred -------EEEEEEeCCCeEEEEECCCeEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC--
Q psy7057 122 -------VRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ-- 190 (557)
Q Consensus 122 -------V~~l~~~~~~~lvs~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~-- 190 (557)
+.+++|++++.+++++.|+.|++||+++++++..+..|...|.++++ ++++|++++.|+.|++||+...
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~ 281 (425)
T 1r5m_A 202 HSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNS 281 (425)
T ss_dssp ----CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSC
T ss_pred ccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCcc
Confidence 99999999999999999999999999999999999999999999999 6779999999999999997654
Q ss_pred -ceEeeCCccEEEEEEcCCCcEEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEe
Q psy7057 191 -NSFMIPAMSVWAVAILPNSDIVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFS 269 (557)
Q Consensus 191 -~~~~~~~~~v~~v~~~p~g~l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~ 269 (557)
..+..|...|.+++|+|++.+++++.|+.|++|++.+.+.... ...+...+..+.+.+... .+++++.||.|++|+
T Consensus 282 ~~~~~~~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~--~~~~~~~i~~~~~s~~~~-~l~~~~~dg~i~i~~ 358 (425)
T 1r5m_A 282 QNCFYGHSQSIVSASWVGDDKVISCSMDGSVRLWSLKQNTLLAL--SIVDGVPIFAGRISQDGQ-KYAVAFMDGQVNVYD 358 (425)
T ss_dssp SEEECCCSSCEEEEEEETTTEEEEEETTSEEEEEETTTTEEEEE--EECTTCCEEEEEECTTSS-EEEEEETTSCEEEEE
T ss_pred ceEecCCCccEEEEEECCCCEEEEEeCCCcEEEEECCCCcEeEe--cccCCccEEEEEEcCCCC-EEEEEECCCeEEEEE
Confidence 5666788899999999999888999999999999987765432 234556788888877654 588999999999999
Q ss_pred cCCCh
Q psy7057 270 ANPDR 274 (557)
Q Consensus 270 ~~~~~ 274 (557)
+...+
T Consensus 359 ~~~~~ 363 (425)
T 1r5m_A 359 LKKLN 363 (425)
T ss_dssp CHHHH
T ss_pred CCCCc
Confidence 87543
No 59
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.97 E-value=4.9e-31 Score=275.03 Aligned_cols=263 Identities=14% Similarity=0.104 Sum_probs=223.1
Q ss_pred CcccEEEEEEcCCCc--EEEE----------ECCCcEEEEcCCC------------------CCCCCCCCEEEEEECCCe
Q psy7057 11 HSMDVRSLSVTPDGC--ILSA----------SRDKSAKLWKPND------------------LSPGAKVNTLLSASWDMT 60 (557)
Q Consensus 11 H~~~V~~l~~spdg~--l~sg----------s~Dg~V~iWd~~~------------------~~~~~~~~~l~sgs~Dg~ 60 (557)
+...|.+++|+|+++ |++| +.|++|++|++.+ +.+++++.+|++|+.|+.
T Consensus 11 ~~~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~ 90 (416)
T 2pm9_A 11 EFSRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASLQVDSKFNDLDWSHNNKIIAGALDNGS 90 (416)
T ss_dssp EEEESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCCCCSSCEEEEEECSSSSCEEEEESSSC
T ss_pred hhhhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEEecCCceEEEEECCCCCeEEEEccCCe
Confidence 456889999999986 6788 8999999999874 566788999999999999
Q ss_pred EEEEECCC----CeEEEEEcccCCcEEEEEEcCC-C-EEEEEECCCeEEEEeCC-Cc------EE---EEEeCCCCCEEE
Q psy7057 61 AKLWCLES----QQCKLTIRQHEMAVWGVIQLAN-G-IIVTGCADKTIKLHSEE-GE------FL---KTLTGHTDCVRG 124 (557)
Q Consensus 61 i~iwd~~~----~~~~~~l~~h~~~V~~l~~~~~-~-~l~sgs~dg~I~vwd~~-~~------~~---~~l~~h~~~V~~ 124 (557)
|++|++.+ .+.+..+.+|...|.+++|+|+ + +|++++.|+.|++||.. +. .. ..+..|...|.+
T Consensus 91 v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 170 (416)
T 2pm9_A 91 LELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVIS 170 (416)
T ss_dssp EEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCE
T ss_pred EEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeE
Confidence 99999987 4588889999999999999997 5 99999999999999943 32 22 234679999999
Q ss_pred EEEeCC-Ce-EEEEECCCeEEEEECCCCeEEEEEeCC------CCcEEEEEE--cC-CEEEEEeCCC---eEEEEECCCC
Q psy7057 125 LAVLND-TD-FVSCSNDASIRVWDSTTGKCVHTMYGH------PNFIYSVAA--HG-DLITSGGEDQ---CVCVYQNKAQ 190 (557)
Q Consensus 125 l~~~~~-~~-lvs~s~Dg~I~vwd~~~~~~~~~~~~h------~~~V~~l~~--~~-~~l~s~s~Dg---~I~iwd~~~~ 190 (557)
++|+|+ +. |++++.|+.|++||+++++++..+..| ...|.+++| ++ .++++++.|+ .|++||++..
T Consensus 171 ~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~ 250 (416)
T 2pm9_A 171 LAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNA 250 (416)
T ss_dssp EEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTST
T ss_pred EEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCC
Confidence 999998 44 779999999999999999999999876 789999999 33 5899999999 9999997653
Q ss_pred ----ceEe-eCCccEEEEEEcC-CCc-EEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCC
Q psy7057 191 ----NSFM-IPAMSVWAVAILP-NSD-IVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDG 263 (557)
Q Consensus 191 ----~~~~-~~~~~v~~v~~~p-~g~-l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG 263 (557)
..+. .|...|.+++|+| ++. |++++.|+.|++|++.+.+... ....+...+..+.+.+..+..+++++.||
T Consensus 251 ~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~--~~~~~~~~v~~~~~s~~~~~~l~s~~~d~ 328 (416)
T 2pm9_A 251 NTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLS--QFPARGNWCFKTKFAPEAPDLFACASFDN 328 (416)
T ss_dssp TSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEE--EEECSSSCCCCEEECTTCTTEEEECCSSS
T ss_pred CCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccce--eecCCCCceEEEEECCCCCCEEEEEecCC
Confidence 4555 7888999999999 777 9999999999999998876542 23356677888888888766789999999
Q ss_pred cEEEEecCCChh
Q psy7057 264 IVRVFSANPDRQ 275 (557)
Q Consensus 264 ~IrvW~~~~~~~ 275 (557)
.|++|++.....
T Consensus 329 ~i~iw~~~~~~~ 340 (416)
T 2pm9_A 329 KIEVQTLQNLTN 340 (416)
T ss_dssp EEEEEESCCCCC
T ss_pred cEEEEEccCCCC
Confidence 999999987653
No 60
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.97 E-value=3.2e-29 Score=266.18 Aligned_cols=263 Identities=22% Similarity=0.275 Sum_probs=213.6
Q ss_pred EEEEeccCcccE-EEEEEcCCCcEEEEECCCcEEEEcCCC----------------CCCCCCCCEEEEEECCCeEEEEEC
Q psy7057 4 LSTALYGHSMDV-RSLSVTPDGCILSASRDKSAKLWKPND----------------LSPGAKVNTLLSASWDMTAKLWCL 66 (557)
Q Consensus 4 l~~~l~gH~~~V-~~l~~spdg~l~sgs~Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~Dg~i~iwd~ 66 (557)
....|.+|.+.| .++.+++ +.|++|+.||+|++||+.+ +.+.+++ .|++|+.|++|++||+
T Consensus 113 ~~~~l~~h~~~v~~~~~~~~-~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~ 190 (464)
T 3v7d_B 113 QRTTLRGHMTSVITCLQFED-NYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDI 190 (464)
T ss_dssp EEEEEECCSSSCEEEEEEET-TEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEET
T ss_pred ceEEEcCCCCCcEEEEEECC-CEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEEC
Confidence 456899999885 6666643 3599999999999999876 4455555 9999999999999999
Q ss_pred CCCeEEEEEcccCCcEEEEEEcC--CC-EEEEEECCCeEEEEeCCCc------------------------EEEEEeCCC
Q psy7057 67 ESQQCKLTIRQHEMAVWGVIQLA--NG-IIVTGCADKTIKLHSEEGE------------------------FLKTLTGHT 119 (557)
Q Consensus 67 ~~~~~~~~l~~h~~~V~~l~~~~--~~-~l~sgs~dg~I~vwd~~~~------------------------~~~~l~~h~ 119 (557)
.+++++..+.+|...|.++++++ ++ .+++|+.|++|++||.... .+..+.+|.
T Consensus 191 ~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (464)
T 3v7d_B 191 KKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHM 270 (464)
T ss_dssp TTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCS
T ss_pred CCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCcc
Confidence 99999999999999999999984 55 8999999999999994322 256788999
Q ss_pred CCEEEEEEeCCCeEEEEECCCeEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC---ceEe
Q psy7057 120 DCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ---NSFM 194 (557)
Q Consensus 120 ~~V~~l~~~~~~~lvs~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~---~~~~ 194 (557)
..|.++... ...+++++.|++|++||+++++++..+.+|...|.++++ ++..+++++.|+.|++||+++. ..+.
T Consensus 271 ~~v~~~~~~-~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~ 349 (464)
T 3v7d_B 271 ASVRTVSGH-GNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQ 349 (464)
T ss_dssp SCEEEEEEE-TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEEC
T ss_pred ceEEEEcCC-CCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEe
Confidence 999988543 245889999999999999999999999999999999999 6779999999999999998766 5667
Q ss_pred eCCccEEEEEEcCCCcEEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecCCCh
Q psy7057 195 IPAMSVWAVAILPNSDIVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPDR 274 (557)
Q Consensus 195 ~~~~~v~~v~~~p~g~l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~~~ 274 (557)
.|...|.++++++ ..+++++.||.|++||+.+....... .+...+..+.+.+... .+++++ ||.|++|++..++
T Consensus 350 ~h~~~v~~~~~~~-~~l~s~s~dg~v~vwd~~~~~~~~~~---~~~~~~~~~~~~~~~~-~l~~~~-dg~i~iwd~~~g~ 423 (464)
T 3v7d_B 350 GHTALVGLLRLSD-KFLVSAAADGSIRGWDANDYSRKFSY---HHTNLSAITTFYVSDN-ILVSGS-ENQFNIYNLRSGK 423 (464)
T ss_dssp CCSSCEEEEEECS-SEEEEEETTSEEEEEETTTCCEEEEE---ECTTCCCEEEEEECSS-EEEEEE-TTEEEEEETTTCC
T ss_pred CCCCcEEEEEEcC-CEEEEEeCCCcEEEEECCCCceeeee---cCCCCccEEEEEeCCC-EEEEec-CCeEEEEECCCCc
Confidence 7889999999984 34999999999999999876543221 1223333444444433 466666 9999999988764
Q ss_pred h
Q psy7057 275 Q 275 (557)
Q Consensus 275 ~ 275 (557)
.
T Consensus 424 ~ 424 (464)
T 3v7d_B 424 L 424 (464)
T ss_dssp E
T ss_pred E
Confidence 3
No 61
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.97 E-value=7.1e-31 Score=273.78 Aligned_cols=263 Identities=16% Similarity=0.156 Sum_probs=216.4
Q ss_pred cCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC--------------------CCCCCC-CCEEEEEECCCeEEEEECC
Q psy7057 10 GHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND--------------------LSPGAK-VNTLLSASWDMTAKLWCLE 67 (557)
Q Consensus 10 gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~--------------------~~~~~~-~~~l~sgs~Dg~i~iwd~~ 67 (557)
.|...|++++|+|++. |++|+.||.|++|++.. +.++++ +.+|++++.|++|++||+.
T Consensus 65 ~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~ 144 (416)
T 2pm9_A 65 QVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMN 144 (416)
T ss_dssp CCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTT
T ss_pred ecCCceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECC
Confidence 5889999999999998 89999999999999864 556776 8899999999999999998
Q ss_pred CCe------EEEE---EcccCCcEEEEEEcCC-C-EEEEEECCCeEEEEe-CCCcEEEEEeCC------CCCEEEEEEeC
Q psy7057 68 SQQ------CKLT---IRQHEMAVWGVIQLAN-G-IIVTGCADKTIKLHS-EEGEFLKTLTGH------TDCVRGLAVLN 129 (557)
Q Consensus 68 ~~~------~~~~---l~~h~~~V~~l~~~~~-~-~l~sgs~dg~I~vwd-~~~~~~~~l~~h------~~~V~~l~~~~ 129 (557)
+++ .... +..|...|.+++|+|+ + .+++++.|+.|++|| ..++.+..+..| ...|.+++|+|
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 224 (416)
T 2pm9_A 145 KCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHP 224 (416)
T ss_dssp TTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECS
T ss_pred CCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECC
Confidence 876 3333 3679999999999998 4 899999999999999 456777777766 78999999999
Q ss_pred CC--eEEEEECCC---eEEEEECCCC-eEEEEEe-CCCCcEEEEEE---cCCEEEEEeCCCeEEEEECCCC---ceEeeC
Q psy7057 130 DT--DFVSCSNDA---SIRVWDSTTG-KCVHTMY-GHPNFIYSVAA---HGDLITSGGEDQCVCVYQNKAQ---NSFMIP 196 (557)
Q Consensus 130 ~~--~lvs~s~Dg---~I~vwd~~~~-~~~~~~~-~h~~~V~~l~~---~~~~l~s~s~Dg~I~iwd~~~~---~~~~~~ 196 (557)
++ .+++++.|+ .|++||++++ +++..+. +|...|.+++| ++.+|++++.|++|++||+.+. ..+..|
T Consensus 225 ~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~ 304 (416)
T 2pm9_A 225 KNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPAR 304 (416)
T ss_dssp SCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECS
T ss_pred CCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCC
Confidence 86 477999998 9999999986 6777787 89999999999 4578999999999999997765 566778
Q ss_pred CccEEEEEEcCCC-c-EEEEEcCCcEEEEecCCCCcchhHH---------------Hhc------------------ccc
Q psy7057 197 AMSVWAVAILPNS-D-IVTGSSDGIVRVFSANPDRQAEDAV---------------QAQ------------------YAE 241 (557)
Q Consensus 197 ~~~v~~v~~~p~g-~-l~sg~~Dg~I~iwd~~~~~~~~~~~---------------~~~------------------~~~ 241 (557)
...|.+++|+|++ . +++++.|+.|++|++.......... ... +..
T Consensus 305 ~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (416)
T 2pm9_A 305 GNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFHLQAPTWYGE 384 (416)
T ss_dssp SSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSSCC----------------------CCSCCCSSCCCCCSTTCC
T ss_pred CCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCcccccccccccCCcccccccccccccccccccccccCCccccC
Confidence 8999999999998 5 8899999999999998765322110 000 233
Q ss_pred eeEEEeccCCCceeEEEEeCCCcEEEEecCCC
Q psy7057 242 EVKKLKSANEQEIGGVKVSDDGIVRVFSANPD 273 (557)
Q Consensus 242 ~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~~ 273 (557)
.+..+.+.+.. ..+++++.||+|+||++.++
T Consensus 385 ~~~~~~~s~dg-~~la~~~~d~~v~~w~~~~~ 415 (416)
T 2pm9_A 385 PSPAAHWAFGG-KLVQITPDGKGVSITNPKIS 415 (416)
T ss_dssp CSCCCEEETTT-EEECBCTTSSCBCCBCCCCC
T ss_pred CccceEEeeCC-eEEEEeCCCCeEEEEEeccC
Confidence 34445555443 45788899999999998865
No 62
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.97 E-value=9.6e-31 Score=282.85 Aligned_cols=264 Identities=11% Similarity=0.012 Sum_probs=203.0
Q ss_pred CcccEEEEEEcCCC---------c-EE-------------------EEECCCcEEEEcCCC-------------------
Q psy7057 11 HSMDVRSLSVTPDG---------C-IL-------------------SASRDKSAKLWKPND------------------- 42 (557)
Q Consensus 11 H~~~V~~l~~spdg---------~-l~-------------------sgs~Dg~V~iWd~~~------------------- 42 (557)
+.+.|.+|+|+|++ . || +++.|++|+||++..
T Consensus 132 ~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~ 211 (524)
T 2j04_B 132 VGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVW 211 (524)
T ss_dssp CCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCEEEEEEEEECCCSEE
T ss_pred CCCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCceEEEEEEecCCcEE
Confidence 56788888888875 3 44 456889999998743
Q ss_pred -CCCCCC------CCEEEEEECCCeEEEEECCCCe-----------EEEEEcccCCcEEEEEEcCCCEEEEEECCCeEEE
Q psy7057 43 -LSPGAK------VNTLLSASWDMTAKLWCLESQQ-----------CKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKL 104 (557)
Q Consensus 43 -~~~~~~------~~~l~sgs~Dg~i~iwd~~~~~-----------~~~~l~~h~~~V~~l~~~~~~~l~sgs~dg~I~v 104 (557)
++++|. +.+|++++.|++|++||+.++. +..++.+|...|++++|++++.|++|+.||+|++
T Consensus 212 ~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~~lasgs~DgtV~l 291 (524)
T 2j04_B 212 DLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPTTVVCGFKNGFVAE 291 (524)
T ss_dssp EEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSSEEEEEETTSEEEE
T ss_pred EEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCCeEEEEeCCCEEEE
Confidence 344543 5799999999999999997653 2347889999999999999889999999999999
Q ss_pred EeCC-C-cEEEEEeCCCCCEEEE--EEeCCC-e-EEEEECCCeEEEEECCCCeEEEEEeCCCC--cEEEEEE--cCCEEE
Q psy7057 105 HSEE-G-EFLKTLTGHTDCVRGL--AVLNDT-D-FVSCSNDASIRVWDSTTGKCVHTMYGHPN--FIYSVAA--HGDLIT 174 (557)
Q Consensus 105 wd~~-~-~~~~~l~~h~~~V~~l--~~~~~~-~-lvs~s~Dg~I~vwd~~~~~~~~~~~~h~~--~V~~l~~--~~~~l~ 174 (557)
||.. + .+...+.+|...|+++ ++++++ . |+|||.|++|+|||+++++++.++.+|.. .|.+++| ++..++
T Consensus 292 WD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~ 371 (524)
T 2j04_B 292 FDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYI 371 (524)
T ss_dssp EETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEEE
T ss_pred EECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCcccceEeCCCcCeEE
Confidence 9964 3 3456788999999999 467776 4 78999999999999999887777777753 5788898 567899
Q ss_pred EEeCCCeEEEEECCCC---ceEeeCCccEEEEEEcCCCc-EEEEEcCCcEEEEecCCCCcch------------------
Q psy7057 175 SGGEDQCVCVYQNKAQ---NSFMIPAMSVWAVAILPNSD-IVTGSSDGIVRVFSANPDRQAE------------------ 232 (557)
Q Consensus 175 s~s~Dg~I~iwd~~~~---~~~~~~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~~~~------------------ 232 (557)
+++.|++|++||++.. ..+..|...|++|+|+|++. |++|+.|++|++|+........
T Consensus 372 s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~~~~~~~~~~~~~~~~~v~~v~~ 451 (524)
T 2j04_B 372 YSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVLAGSADGSLIITNAARRLLHGIKNSSATQKSLRLWKWDY 451 (524)
T ss_dssp EECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCEEEETTTEEECCBSCSSTTTCC------CCCCEEEECBC
T ss_pred EeCCCCcEEEEECcccccceeeecCCCceEEEEeCCCCCeEEEEECCCEEEEEechHhhccccccCccceeeeEEEEecc
Confidence 9999999999998765 56788999999999999998 8999999999999864321100
Q ss_pred ------------------------hHHHhcccceeEEEeccCCCc--eeEEEEeCCCcEEEEecCCCh
Q psy7057 233 ------------------------DAVQAQYAEEVKKLKSANEQE--IGGVKVSDDGIVRVFSANPDR 274 (557)
Q Consensus 233 ------------------------~~~~~~~~~~v~~l~~~~~~~--~~~vs~s~DG~IrvW~~~~~~ 274 (557)
......+...|..+.+.+... ..+++|+.||+||||.+..+.
T Consensus 452 sp~g~~~~~~~~~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~~~~~lAsg~~~g~vrlw~l~~~~ 519 (524)
T 2j04_B 452 SIKDDKYRIDSSYEVYPLTVNDVSKAKIDAHGINITCTKWNETSAGGKCYAFSNSAGLLTLEYLSLEH 519 (524)
T ss_dssp CSSSCEEEECCCCCCCC-------------CCCSCCCEEECCSTTTTTEEEEECTTSEEEEEECSCC-
T ss_pred CCCCCeEEccCCceecccccCCcceeeecCCCceEEEEECCCCCCccHHHHhhccCceEEEEEccccc
Confidence 011223445566677776643 467889999999999987653
No 63
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.97 E-value=1.7e-29 Score=254.79 Aligned_cols=259 Identities=17% Similarity=0.193 Sum_probs=217.2
Q ss_pred CcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC----------------CCCCCCCCEEEEEECCCeEEEEECCCCe---
Q psy7057 11 HSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND----------------LSPGAKVNTLLSASWDMTAKLWCLESQQ--- 70 (557)
Q Consensus 11 H~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~~--- 70 (557)
|.+.|.+++|+|||+ ++++..++.+.+|.... +++++++.+|++++ |+.|++|++.+++
T Consensus 8 ~~~~v~~~~~s~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~ 86 (337)
T 1gxr_A 8 GSKPAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQINTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKS 86 (337)
T ss_dssp EEEECCEEEECSSSCEEECCCCTTSSSSTTCCSEEEEEEEECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCS
T ss_pred cCCceeEEEECCCCCEEEeecCCCcEeccccCCccccceeccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCcee
Confidence 567899999999999 66666666666654433 67788899999999 9999999998764
Q ss_pred EEEEEc--ccCCcEEEEEEcCCC-EEEEEECCCeEEEEeCC-Cc--EEEEEeCCCCCEEEEEEeCCCe-EEEEECCCeEE
Q psy7057 71 CKLTIR--QHEMAVWGVIQLANG-IIVTGCADKTIKLHSEE-GE--FLKTLTGHTDCVRGLAVLNDTD-FVSCSNDASIR 143 (557)
Q Consensus 71 ~~~~l~--~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~-~~--~~~~l~~h~~~V~~l~~~~~~~-lvs~s~Dg~I~ 143 (557)
....+. .|...|.+++|+|++ .|++++.|+.|++||.. ++ ....+..|...|.+++|+|++. +++++.|+.|+
T Consensus 87 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~ 166 (337)
T 1gxr_A 87 PVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIA 166 (337)
T ss_dssp CSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred eeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEE
Confidence 233333 799999999999998 89999999999999954 33 5667888999999999999976 77999999999
Q ss_pred EEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCCc--eEeeCCccEEEEEEcCCCc-EEEEEcCC
Q psy7057 144 VWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQN--SFMIPAMSVWAVAILPNSD-IVTGSSDG 218 (557)
Q Consensus 144 vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~~--~~~~~~~~v~~v~~~p~g~-l~sg~~Dg 218 (557)
+||+++++.+..+..|...|.++++ +++.|++++.|+.|++||++... ....+...+.+++|+|++. +++++.|+
T Consensus 167 ~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~ 246 (337)
T 1gxr_A 167 VWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESS 246 (337)
T ss_dssp EEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECTTSSEEEEEETTS
T ss_pred EEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeecCCCceEEEEECCCCCEEEEEcCCC
Confidence 9999999999999999999999999 67799999999999999987763 2335677899999999998 88999999
Q ss_pred cEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecCCCh
Q psy7057 219 IVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPDR 274 (557)
Q Consensus 219 ~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~~~ 274 (557)
.|++|++...... ....+...+..+.+.+... .+++++.||.|++|++..++
T Consensus 247 ~i~~~~~~~~~~~---~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~~~~~~~~~ 298 (337)
T 1gxr_A 247 NVEVLHVNKPDKY---QLHLHESCVLSLKFAYCGK-WFVSTGKDNLLNAWRTPYGA 298 (337)
T ss_dssp CEEEEETTSSCEE---EECCCSSCEEEEEECTTSS-EEEEEETTSEEEEEETTTCC
T ss_pred cEEEEECCCCCeE---EEcCCccceeEEEECCCCC-EEEEecCCCcEEEEECCCCe
Confidence 9999999877643 2345667788888877655 58899999999999987653
No 64
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.97 E-value=4.4e-29 Score=260.96 Aligned_cols=259 Identities=14% Similarity=0.173 Sum_probs=210.9
Q ss_pred ccEEEEEEcCCCc-EEEEECCCcEEEEcCCC----------------CCCCCCCCEEEEEECCCeEEEEECCCCeEEEEE
Q psy7057 13 MDVRSLSVTPDGC-ILSASRDKSAKLWKPND----------------LSPGAKVNTLLSASWDMTAKLWCLESQQCKLTI 75 (557)
Q Consensus 13 ~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l 75 (557)
..+...+|+|+++ |++|+.||.|++||+.. +.+++++.+|++|+.|++|++||+.+++.+..+
T Consensus 98 ~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~ 177 (420)
T 3vl1_A 98 DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTL 177 (420)
T ss_dssp CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEE
T ss_pred CceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEE
Confidence 4455557899998 88999999999999876 677888999999999999999999999999999
Q ss_pred cccCCcEEEEEEcCCC-EEEEEECCCeEEEEe-CCCcEEEEEeC---CCCCEEEEEE---------------------eC
Q psy7057 76 RQHEMAVWGVIQLANG-IIVTGCADKTIKLHS-EEGEFLKTLTG---HTDCVRGLAV---------------------LN 129 (557)
Q Consensus 76 ~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd-~~~~~~~~l~~---h~~~V~~l~~---------------------~~ 129 (557)
.+|...|.+++|+|++ .|++++.|++|++|| .+++++..+.. |...|.++++ +|
T Consensus 178 ~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~ 257 (420)
T 3vl1_A 178 IGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGT 257 (420)
T ss_dssp ECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSC
T ss_pred cCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcC
Confidence 9999999999999988 899999999999999 56777777764 4455666655 57
Q ss_pred CCe-EEEEECCCeEEEEECCCCeEEEEEe-CCCCcEEEEEE--cCC-EEEEEeCCCeEEEEECCCC----ceEee-CCcc
Q psy7057 130 DTD-FVSCSNDASIRVWDSTTGKCVHTMY-GHPNFIYSVAA--HGD-LITSGGEDQCVCVYQNKAQ----NSFMI-PAMS 199 (557)
Q Consensus 130 ~~~-lvs~s~Dg~I~vwd~~~~~~~~~~~-~h~~~V~~l~~--~~~-~l~s~s~Dg~I~iwd~~~~----~~~~~-~~~~ 199 (557)
++. +++++.|+.|++||+++++.+..+. .|...|.+++| ++. +|++++.||.|++||+++. ..+.. +...
T Consensus 258 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~ 337 (420)
T 3vl1_A 258 YGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTP 337 (420)
T ss_dssp TTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSC
T ss_pred CCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCC
Confidence 776 7799999999999999998887775 48899999999 455 9999999999999997654 45555 6677
Q ss_pred EEEEEEcCCCc-EEEEEcCCcEEEEecCCCCcch-------hHHHhcccceeEEEeccCCCce--eEEEEeCCCcEEEEe
Q psy7057 200 VWAVAILPNSD-IVTGSSDGIVRVFSANPDRQAE-------DAVQAQYAEEVKKLKSANEQEI--GGVKVSDDGIVRVFS 269 (557)
Q Consensus 200 v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~~~~-------~~~~~~~~~~v~~l~~~~~~~~--~~vs~s~DG~IrvW~ 269 (557)
|.++.+. ++. |++++.|+.|++|++....... ......+...+..+.+.+.... .+++++.+|.+++|+
T Consensus 338 v~~~~~~-~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~g~l~a~g~~g~~~~~~ 416 (420)
T 3vl1_A 338 INNVYFA-AGALFVSSGFDTSIKLDIISDPESERPAIEFETPTFLVSNDDAVSQFCYVSDDESNGEVLEVGKNNFCALYN 416 (420)
T ss_dssp EEEEEEE-TTEEEEEETTTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEEEECCSSSSCEEEEEETTTEEEEEE
T ss_pred ceEEEeC-CCCEEEEecCCccEEEEeccCCCCCccceeccCccEEccCCcceEEEEEccCCCCcceEEEEcCCceEEEEe
Confidence 8888665 555 8999999999999987642211 1122345566777877776551 478888999999999
Q ss_pred cCC
Q psy7057 270 ANP 272 (557)
Q Consensus 270 ~~~ 272 (557)
++.
T Consensus 417 ~~~ 419 (420)
T 3vl1_A 417 LSN 419 (420)
T ss_dssp SCC
T ss_pred ccC
Confidence 864
No 65
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=4.1e-29 Score=256.32 Aligned_cols=244 Identities=16% Similarity=0.192 Sum_probs=195.7
Q ss_pred EEEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCCCCCCCCCCEEEEEECCCeEEEEECC--CCeEEEEEcccC
Q psy7057 3 KLSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPNDLSPGAKVNTLLSASWDMTAKLWCLE--SQQCKLTIRQHE 79 (557)
Q Consensus 3 kl~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~~~~~~~~~~l~sgs~Dg~i~iwd~~--~~~~~~~l~~h~ 79 (557)
++...+.+|.+.|++++|+|++. |++|+.||+|++| ++. +++.+..+.+|.
T Consensus 2 ~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw--------------------------~~~~~~~~~~~~~~~h~ 55 (379)
T 3jrp_A 2 SMVVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIF--------------------------EVEGETHKLIDTLTGHE 55 (379)
T ss_dssp ---CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEE--------------------------EEETTEEEEEEEECCCS
T ss_pred CccEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEE--------------------------ecCCCcceeeeEecCCC
Confidence 35678999999999999999865 5555555555555 444 446677889999
Q ss_pred CcEEEEEEcCC--C-EEEEEECCCeEEEEeC-CCc--EEEEEeCCCCCEEEEEEeCC--Ce-EEEEECCCeEEEEECCCC
Q psy7057 80 MAVWGVIQLAN--G-IIVTGCADKTIKLHSE-EGE--FLKTLTGHTDCVRGLAVLND--TD-FVSCSNDASIRVWDSTTG 150 (557)
Q Consensus 80 ~~V~~l~~~~~--~-~l~sgs~dg~I~vwd~-~~~--~~~~l~~h~~~V~~l~~~~~--~~-lvs~s~Dg~I~vwd~~~~ 150 (557)
..|++++|+++ + .|++|+.|+.|++||. ++. .+..+..|...|.+++|+|+ +. |++++.|+.|++||++++
T Consensus 56 ~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~ 135 (379)
T 3jrp_A 56 GPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKEN 135 (379)
T ss_dssp SCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTT
T ss_pred CcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCC
Confidence 99999999875 5 9999999999999994 444 67788889999999999998 55 779999999999999877
Q ss_pred --eEEEEEeCCCCcEEEEEEc---------------CCEEEEEeCCCeEEEEECCCC-------ceEeeCCccEEEEEEc
Q psy7057 151 --KCVHTMYGHPNFIYSVAAH---------------GDLITSGGEDQCVCVYQNKAQ-------NSFMIPAMSVWAVAIL 206 (557)
Q Consensus 151 --~~~~~~~~h~~~V~~l~~~---------------~~~l~s~s~Dg~I~iwd~~~~-------~~~~~~~~~v~~v~~~ 206 (557)
.....+..|...|.+++|. +..|++++.|+.|++||++.. ..+..|...|.+++|+
T Consensus 136 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~s 215 (379)
T 3jrp_A 136 GTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWS 215 (379)
T ss_dssp SCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEEC
T ss_pred CceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEEC
Confidence 3455677899999999993 578999999999999996543 3456688899999999
Q ss_pred CC---Cc-EEEEEcCCcEEEEecCCCCcc---hhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecCCC
Q psy7057 207 PN---SD-IVTGSSDGIVRVFSANPDRQA---EDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPD 273 (557)
Q Consensus 207 p~---g~-l~sg~~Dg~I~iwd~~~~~~~---~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~~ 273 (557)
|+ +. |++++.||.|++|++...... .......+...+..+.+.+... .+++++.||.|++|++...
T Consensus 216 p~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~-~l~~~~~dg~i~iw~~~~~ 288 (379)
T 3jrp_A 216 PTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGN-VLALSGGDNKVTLWKENLE 288 (379)
T ss_dssp CCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSC-CEEEEESSSSEEEEEEEET
T ss_pred CCCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCC-EEEEecCCCcEEEEeCCCC
Confidence 99 67 889999999999999876421 2222234667788888877665 5888999999999998753
No 66
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.97 E-value=1.8e-28 Score=257.78 Aligned_cols=258 Identities=18% Similarity=0.244 Sum_probs=214.3
Q ss_pred cEEEEEEcCCCcEEEEECCCcEEEEcCCC------------------CCCCCCCCEEEEEECCCeEEEEECCCCeEEEEE
Q psy7057 14 DVRSLSVTPDGCILSASRDKSAKLWKPND------------------LSPGAKVNTLLSASWDMTAKLWCLESQQCKLTI 75 (557)
Q Consensus 14 ~V~~l~~spdg~l~sgs~Dg~V~iWd~~~------------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l 75 (557)
.++.|+||+++.|++| .|++|+|||..+ +++++++.+|++|+.|++|++||+.+++++..+
T Consensus 107 y~~~l~wS~~n~lAvg-ld~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~ 185 (420)
T 4gga_A 107 YLNLVDWSSGNVLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNM 185 (420)
T ss_dssp TCBCEEECTTSEEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred cceeEEECCCCEEEEE-eCCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEE
Confidence 3567999987645554 599999999876 678889999999999999999999999999999
Q ss_pred cccCCcEEEEEEcCCCEEEEEECCCeEEEEeC--CCcEEEEEeCCCCCEEEEEEeCCCe-EEEEECCCeEEEEECCCCe-
Q psy7057 76 RQHEMAVWGVIQLANGIIVTGCADKTIKLHSE--EGEFLKTLTGHTDCVRGLAVLNDTD-FVSCSNDASIRVWDSTTGK- 151 (557)
Q Consensus 76 ~~h~~~V~~l~~~~~~~l~sgs~dg~I~vwd~--~~~~~~~l~~h~~~V~~l~~~~~~~-lvs~s~Dg~I~vwd~~~~~- 151 (557)
.+|...+.++.+.+ ..+++|+.|+.+++||. ....+..+.+|...++.+.++|++. +++++.|+.+++|+..+++
T Consensus 186 ~~h~~~v~~~s~~~-~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~ 264 (420)
T 4gga_A 186 TSHSARVGSLSWNS-YILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEG 264 (420)
T ss_dssp CCCSSCEEEEEEET-TEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSS
T ss_pred eCCCCceEEEeeCC-CEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccc
Confidence 99999999998853 48999999999999993 4566788999999999999999977 7799999999999998764
Q ss_pred ---EEEEEeCCCCcEEEEEE---cCCEEEEE--eCCCeEEEEECCCCc--eEeeCCccEEEEEEcCCCc-EEEEE--cCC
Q psy7057 152 ---CVHTMYGHPNFIYSVAA---HGDLITSG--GEDQCVCVYQNKAQN--SFMIPAMSVWAVAILPNSD-IVTGS--SDG 218 (557)
Q Consensus 152 ---~~~~~~~h~~~V~~l~~---~~~~l~s~--s~Dg~I~iwd~~~~~--~~~~~~~~v~~v~~~p~g~-l~sg~--~Dg 218 (557)
.+.....|...|.++++ .+..++++ +.|++|++||+.+.. ........+.++.|+|++. +++++ .|+
T Consensus 265 ~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~~~v~~~~~~~~~~~lv~~sg~~d~ 344 (420)
T 4gga_A 265 GWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQN 344 (420)
T ss_dssp CSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECSSCEEEEEEETTTTEEEEEECTTTC
T ss_pred cceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeeccccceeeeeecCCCCeEEEEEecCCC
Confidence 45677889999999999 34566654 579999999988762 2233456899999999988 66554 799
Q ss_pred cEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecCCChhh
Q psy7057 219 IVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPDRQA 276 (557)
Q Consensus 219 ~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~~~~~ 276 (557)
.|+|||+.++++.. ...+|...|..+.+.++.. .++|||.||+||||++.+....
T Consensus 345 ~I~iwd~~~~~~v~--~l~gH~~~V~~l~~spdg~-~l~S~s~D~tvriWdv~~~~~~ 399 (420)
T 4gga_A 345 QLVIWKYPTMAKVA--ELKGHTSRVLSLTMSPDGA-TVASAAADETLRLWRCFELDPA 399 (420)
T ss_dssp CEEEEETTTCCEEE--EECCCSSCEEEEEECTTSS-CEEEEETTTEEEEECCSCSSCC
T ss_pred EEEEEECCCCcEEE--EEcCCCCCEEEEEEcCCCC-EEEEEecCCeEEEEECCCCCcc
Confidence 99999998877653 3456888999999887655 5899999999999998765433
No 67
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.97 E-value=5.6e-29 Score=257.22 Aligned_cols=260 Identities=7% Similarity=0.073 Sum_probs=199.5
Q ss_pred cccEEEEEEcCCCc-EEEEECCC-------cEEEEcCCC------------------------CCCCCCCCEEEEEE---
Q psy7057 12 SMDVRSLSVTPDGC-ILSASRDK-------SAKLWKPND------------------------LSPGAKVNTLLSAS--- 56 (557)
Q Consensus 12 ~~~V~~l~~spdg~-l~sgs~Dg-------~V~iWd~~~------------------------~~~~~~~~~l~sgs--- 56 (557)
.-+|+|++|+||++ |++|+.+. .|++|++.. ++.+++++.+++|+
T Consensus 14 g~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~~~~~~~g~~~~ 93 (365)
T 4h5i_A 14 GYPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDASKGIILVGCNEN 93 (365)
T ss_dssp SSCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEETTEEEEECCCC
T ss_pred CCCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeCCCEEEEEECCC
Confidence 35899999999999 77877543 599998764 22334456666654
Q ss_pred --------CCCeEEEEECCCCe----EEEEE-----cccCCcEEEEEEcCCC-EEE--EEECCCeEEEEe-CCCcEEEEE
Q psy7057 57 --------WDMTAKLWCLESQQ----CKLTI-----RQHEMAVWGVIQLANG-IIV--TGCADKTIKLHS-EEGEFLKTL 115 (557)
Q Consensus 57 --------~Dg~i~iwd~~~~~----~~~~l-----~~h~~~V~~l~~~~~~-~l~--sgs~dg~I~vwd-~~~~~~~~l 115 (557)
.|+++|+|++.+.. ..... ..+...+.+++|+|+| +++ +++.|++|++|| .++.++..+
T Consensus 94 ~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~ 173 (365)
T 4h5i_A 94 STKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEI 173 (365)
T ss_dssp HHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEE
T ss_pred ccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEe
Confidence 47789999976542 12222 2245679999999999 554 455799999999 566667666
Q ss_pred eCCCCCEEEEEEeCCCeEEEEECCCeEEEEECCCCeEEEE--EeCCCCcEEEEEE--cCCEEEEEeCCC----eEEEEEC
Q psy7057 116 TGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHT--MYGHPNFIYSVAA--HGDLITSGGEDQ----CVCVYQN 187 (557)
Q Consensus 116 ~~h~~~V~~l~~~~~~~lvs~s~Dg~I~vwd~~~~~~~~~--~~~h~~~V~~l~~--~~~~l~s~s~Dg----~I~iwd~ 187 (557)
. |...|.+++|+|++.+++.+.++.+++|+..+++.+.. ...|...|.+++| ++..+++++.|+ .+++|+.
T Consensus 174 ~-~~~~V~~v~fspdg~~l~s~s~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~ 252 (365)
T 4h5i_A 174 E-TRGEVKDLHFSTDGKVVAYITGSSLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISI 252 (365)
T ss_dssp E-CSSCCCEEEECTTSSEEEEECSSCEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEE
T ss_pred C-CCCceEEEEEccCCceEEeccceeEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeeccc
Confidence 5 77889999999999866444566778888777776644 3468899999999 777899998887 6888986
Q ss_pred CCC-------ceEeeCCccEEEEEEcCCCc-EEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEE
Q psy7057 188 KAQ-------NSFMIPAMSVWAVAILPNSD-IVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKV 259 (557)
Q Consensus 188 ~~~-------~~~~~~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~ 259 (557)
... ..+..|...|++++|+|+|+ |++|+.|++|+|||+.+.++... ...+|...|..+.+.++.. .++|+
T Consensus 253 ~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~-~~~gH~~~V~~v~fSpdg~-~laS~ 330 (365)
T 4h5i_A 253 KSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKI-FKQAHSFAITEVTISPDST-YVASV 330 (365)
T ss_dssp ETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEE-ETTSSSSCEEEEEECTTSC-EEEEE
T ss_pred ccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEE-ecCcccCCEEEEEECCCCC-EEEEE
Confidence 543 34567888999999999999 88999999999999998765432 2456888999999988765 68999
Q ss_pred eCCCcEEEEecCCCh
Q psy7057 260 SDDGIVRVFSANPDR 274 (557)
Q Consensus 260 s~DG~IrvW~~~~~~ 274 (557)
|.|++||||++.+..
T Consensus 331 S~D~tvrvw~ip~~~ 345 (365)
T 4h5i_A 331 SAANTIHIIKLPLNY 345 (365)
T ss_dssp ETTSEEEEEECCTTT
T ss_pred eCCCeEEEEEcCCCC
Confidence 999999999996553
No 68
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.97 E-value=5.3e-29 Score=296.19 Aligned_cols=221 Identities=22% Similarity=0.306 Sum_probs=193.8
Q ss_pred EEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC----------------CCCCCCCCEEEEEECCCeEEEEECCC
Q psy7057 6 TALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND----------------LSPGAKVNTLLSASWDMTAKLWCLES 68 (557)
Q Consensus 6 ~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~Dg~i~iwd~~~ 68 (557)
..+.+|.+.|++++|+|+|+ |++|+.||+|++||+.+ +++++++.+|++++.|++|++||+.+
T Consensus 609 ~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~ 688 (1249)
T 3sfz_A 609 LVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSAT 688 (1249)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred EEEecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCC
Confidence 46789999999999999998 88999999999999876 67888999999999999999999999
Q ss_pred CeEEEEEcccCCcEEEEEEcCC--C-EEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeCCCe-EEEEECCCeEE
Q psy7057 69 QQCKLTIRQHEMAVWGVIQLAN--G-IIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDTD-FVSCSNDASIR 143 (557)
Q Consensus 69 ~~~~~~l~~h~~~V~~l~~~~~--~-~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~~~~-lvs~s~Dg~I~ 143 (557)
++++.++.+|...|.+++|+|+ + .+++|+.|+.|++|| .++.++..+.+|...|++++|+|++. +++++.|++|+
T Consensus 689 ~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~ 768 (1249)
T 3sfz_A 689 GKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLR 768 (1249)
T ss_dssp CCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEE
T ss_pred CceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCCeEE
Confidence 9999999999999999999994 3 899999999999999 67788999999999999999999976 77999999999
Q ss_pred EEECCCCeEEEEEe-------------------------------------------------------CCCCcEEEEEE
Q psy7057 144 VWDSTTGKCVHTMY-------------------------------------------------------GHPNFIYSVAA 168 (557)
Q Consensus 144 vwd~~~~~~~~~~~-------------------------------------------------------~h~~~V~~l~~ 168 (557)
+||+++++....+. +|...|.++++
T Consensus 769 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~ 848 (1249)
T 3sfz_A 769 LWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDF 848 (1249)
T ss_dssp EEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEE
T ss_pred EEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEE
Confidence 99987765544332 56677788888
Q ss_pred --cCCEEEEEeCCCeEEEEECCCC---ceEeeCCccEEEEEEcCCCc-EEEEEcCCcEEEEecC
Q psy7057 169 --HGDLITSGGEDQCVCVYQNKAQ---NSFMIPAMSVWAVAILPNSD-IVTGSSDGIVRVFSAN 226 (557)
Q Consensus 169 --~~~~l~s~s~Dg~I~iwd~~~~---~~~~~~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~ 226 (557)
++..+++++.|+.|++|+..+. ..+..|...|.+++|+|++. +++++.|+.|++|++.
T Consensus 849 sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~ 912 (1249)
T 3sfz_A 849 SPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETK 912 (1249)
T ss_dssp CSSTTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEHH
T ss_pred cCCCCEEEEEeCCCeEEEEEcCCCceeeecCCCccceEEEEECCCCCEEEEEeCCCeEEEEEcc
Confidence 6778889999999999997765 45567888899999999887 8888889999998854
No 69
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.97 E-value=1.7e-28 Score=248.35 Aligned_cols=225 Identities=23% Similarity=0.291 Sum_probs=192.8
Q ss_pred EEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC----------------CCCCCCCCEEEEEECCCeEEEEEC
Q psy7057 4 LSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND----------------LSPGAKVNTLLSASWDMTAKLWCL 66 (557)
Q Consensus 4 l~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~Dg~i~iwd~ 66 (557)
..+.+.+|...|++++|+|+++ |++++.|+.|++|+... ..+.+.+..|++++.|+.+++||+
T Consensus 78 ~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~ 157 (340)
T 4aow_A 78 PQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNT 157 (340)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECT
T ss_pred eeEEEeCCCCCEEEEEECCCCCEEEEEcccccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEe
Confidence 4678999999999999999998 88999999999999887 445667889999999999999998
Q ss_pred CCCeE-EEEEcccCCcEEEEEEcCCC---EEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeCCCe-EEEEECCC
Q psy7057 67 ESQQC-KLTIRQHEMAVWGVIQLANG---IIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDTD-FVSCSNDA 140 (557)
Q Consensus 67 ~~~~~-~~~l~~h~~~V~~l~~~~~~---~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~~~~-lvs~s~Dg 140 (557)
..... ...+.+|...+.+++|++++ .+++++.|+.|++|| .+++++..+.+|...|++++|+|++. |++|+.|+
T Consensus 158 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg 237 (340)
T 4aow_A 158 LGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDG 237 (340)
T ss_dssp TSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTC
T ss_pred CCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCC
Confidence 77644 34457799999999999865 789999999999999 56678889999999999999999976 77999999
Q ss_pred eEEEEECCCCeEEEEEeCCCCcEEEEEE-cCCEEEEEeCCCeEEEEECCCCc------------eEeeCCccEEEEEEcC
Q psy7057 141 SIRVWDSTTGKCVHTMYGHPNFIYSVAA-HGDLITSGGEDQCVCVYQNKAQN------------SFMIPAMSVWAVAILP 207 (557)
Q Consensus 141 ~I~vwd~~~~~~~~~~~~h~~~V~~l~~-~~~~l~s~s~Dg~I~iwd~~~~~------------~~~~~~~~v~~v~~~p 207 (557)
+|++||+++.+++..+.. ...|.++++ .+..+++++.|+.|++||++... ....|...|++++|+|
T Consensus 238 ~i~iwd~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~ 316 (340)
T 4aow_A 238 QAMLWDLNEGKHLYTLDG-GDIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSA 316 (340)
T ss_dssp EEEEEETTTTEEEEEEEC-SSCEEEEEECSSSSEEEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECT
T ss_pred eEEEEEeccCceeeeecC-CceEEeeecCCCCceeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECC
Confidence 999999999999998875 467899999 44567888889999999976542 1235677899999999
Q ss_pred CCc-EEEEEcCCcEEEEecCCCC
Q psy7057 208 NSD-IVTGSSDGIVRVFSANPDR 229 (557)
Q Consensus 208 ~g~-l~sg~~Dg~I~iwd~~~~~ 229 (557)
+++ |++|+.||.|+||++.++.
T Consensus 317 dg~~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 317 DGQTLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp TSSEEEEEETTSCEEEEEEEC--
T ss_pred CCCEEEEEeCCCEEEEEeCCCcC
Confidence 998 8999999999999998764
No 70
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.97 E-value=1.5e-28 Score=254.78 Aligned_cols=269 Identities=16% Similarity=0.214 Sum_probs=216.2
Q ss_pred EEEeccCcccEEEEEEcC-CCc-EEEEECCCcEEEEcCCC-----------------------------CCCCC-CCCEE
Q psy7057 5 STALYGHSMDVRSLSVTP-DGC-ILSASRDKSAKLWKPND-----------------------------LSPGA-KVNTL 52 (557)
Q Consensus 5 ~~~l~gH~~~V~~l~~sp-dg~-l~sgs~Dg~V~iWd~~~-----------------------------~~~~~-~~~~l 52 (557)
...+.+|.+.|++++|+| ++. |++|+.||+|++||+.+ +.+.+ ++.+|
T Consensus 36 ~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l 115 (408)
T 4a11_B 36 RDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMF 115 (408)
T ss_dssp EEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCE
T ss_pred eeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEE
Confidence 467889999999999999 888 88999999999999875 33455 66799
Q ss_pred EEEECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCC---C-EEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEEE
Q psy7057 53 LSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLAN---G-IIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAV 127 (557)
Q Consensus 53 ~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~---~-~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~ 127 (557)
++++.|+.|++||+.+++....+. +...+.++.+.+. + .+++++.|+.|++|| .++..+..+.+|...|.+++|
T Consensus 116 ~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~ 194 (408)
T 4a11_B 116 TSSSFDKTLKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSW 194 (408)
T ss_dssp EEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEEE
T ss_pred EEEeCCCeEEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEEE
Confidence 999999999999999999888876 7888999999984 3 899999999999999 557778899999999999999
Q ss_pred eCCCe--EEEEECCCeEEEEECCCCe-EEEEE---------------eCCCCcEEEEEE--cCCEEEEEeCCCeEEEEEC
Q psy7057 128 LNDTD--FVSCSNDASIRVWDSTTGK-CVHTM---------------YGHPNFIYSVAA--HGDLITSGGEDQCVCVYQN 187 (557)
Q Consensus 128 ~~~~~--lvs~s~Dg~I~vwd~~~~~-~~~~~---------------~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~ 187 (557)
+|++. |++++.|+.|++||++++. ++..+ ..|...|.++++ ++.+|++++.|+.|++||+
T Consensus 195 ~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~ 274 (408)
T 4a11_B 195 SPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNS 274 (408)
T ss_dssp CSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred CCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEEC
Confidence 99975 7799999999999998765 44444 568899999999 6779999999999999997
Q ss_pred CCCceEee---C------CccEEEEEEcCCCcEEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEE
Q psy7057 188 KAQNSFMI---P------AMSVWAVAILPNSDIVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVK 258 (557)
Q Consensus 188 ~~~~~~~~---~------~~~v~~v~~~p~g~l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs 258 (557)
.+...... + ......+...+...+++++.|+.|++|++.+++... ....|...+..+.+.+... .+++
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~--~~~~~~~~v~~~~~s~~~~-~l~s 351 (408)
T 4a11_B 275 SNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQIT--MLKGHYKTVDCCVFQSNFQ-ELYS 351 (408)
T ss_dssp TTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEE--EECCCSSCEEEEEEETTTT-EEEE
T ss_pred CCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCccee--eeccCCCeEEEEEEcCCCC-EEEE
Confidence 76522111 1 111222222333448899999999999998876543 3345778889998887655 5889
Q ss_pred EeCCCcEEEEecCCChhhH
Q psy7057 259 VSDDGIVRVFSANPDRQAE 277 (557)
Q Consensus 259 ~s~DG~IrvW~~~~~~~~~ 277 (557)
++.||.|++|++...+...
T Consensus 352 ~~~dg~i~iw~~~~~~~~~ 370 (408)
T 4a11_B 352 GSRDCNILAWVPSLYEPVP 370 (408)
T ss_dssp EETTSCEEEEEECC-----
T ss_pred ECCCCeEEEEeCCCCCccC
Confidence 9999999999999876543
No 71
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.97 E-value=3.3e-29 Score=252.66 Aligned_cols=226 Identities=19% Similarity=0.244 Sum_probs=192.5
Q ss_pred EEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC--------------------CCCCC--CCCEEEEEECCCeE
Q psy7057 5 STALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND--------------------LSPGA--KVNTLLSASWDMTA 61 (557)
Q Consensus 5 ~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~--------------------~~~~~--~~~~l~sgs~Dg~i 61 (557)
.+.+.+|.+.|++++|+|++. |++|+.||+|++||+.. +++++ ++.+|++|+.|++|
T Consensus 4 ~~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v 83 (351)
T 3f3f_A 4 QPFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTV 83 (351)
T ss_dssp CCEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCE
T ss_pred cccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeE
Confidence 456889999999999999998 89999999999999874 55666 58999999999999
Q ss_pred EEEECCCC---------eEEEEEcccCCcEEEEEEcCC--C-EEEEEECCCeEEEEeC-CCcEEEEE-------------
Q psy7057 62 KLWCLESQ---------QCKLTIRQHEMAVWGVIQLAN--G-IIVTGCADKTIKLHSE-EGEFLKTL------------- 115 (557)
Q Consensus 62 ~iwd~~~~---------~~~~~l~~h~~~V~~l~~~~~--~-~l~sgs~dg~I~vwd~-~~~~~~~l------------- 115 (557)
++||+.++ +++..+..|...|.+++|+|+ + .+++++.|+.|++||. +++.+..+
T Consensus 84 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~ 163 (351)
T 3f3f_A 84 KLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPP 163 (351)
T ss_dssp EEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCC
T ss_pred EEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhcccccccccccccccc
Confidence 99999887 678889999999999999997 7 8999999999999993 33322211
Q ss_pred eCCCCCEEEEEEeCC---Ce-EEEEECCCeEEEEECCCCeE--EEEEeCCCCcEEEEEE--cC----CEEEEEeCCCeEE
Q psy7057 116 TGHTDCVRGLAVLND---TD-FVSCSNDASIRVWDSTTGKC--VHTMYGHPNFIYSVAA--HG----DLITSGGEDQCVC 183 (557)
Q Consensus 116 ~~h~~~V~~l~~~~~---~~-lvs~s~Dg~I~vwd~~~~~~--~~~~~~h~~~V~~l~~--~~----~~l~s~s~Dg~I~ 183 (557)
..|...+.+++|+|+ +. +++++.|+.+.+|+...++. +..+.+|...|.+++| ++ .+|++++.|+.|+
T Consensus 164 ~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~ 243 (351)
T 3f3f_A 164 ANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIR 243 (351)
T ss_dssp SSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEE
T ss_pred CCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEE
Confidence 267889999999996 44 77999999999998877765 7778899999999999 44 5899999999999
Q ss_pred EEECCCC-------------------------------------------------ceEeeCCccEEEEEEcCCCc-EEE
Q psy7057 184 VYQNKAQ-------------------------------------------------NSFMIPAMSVWAVAILPNSD-IVT 213 (557)
Q Consensus 184 iwd~~~~-------------------------------------------------~~~~~~~~~v~~v~~~p~g~-l~s 213 (557)
+||++.. ..+..|...|++++|+|+++ |++
T Consensus 244 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s 323 (351)
T 3f3f_A 244 IFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSS 323 (351)
T ss_dssp EEEEEECC---------------------------------------CCSEEEEEEEEECTTSSCEEEEEECSSSCCEEE
T ss_pred EEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCCCEEEE
Confidence 9996531 33456788999999999998 999
Q ss_pred EEcCCcEEEEecCCCCc
Q psy7057 214 GSSDGIVRVFSANPDRQ 230 (557)
Q Consensus 214 g~~Dg~I~iwd~~~~~~ 230 (557)
++.||.|++|++..+..
T Consensus 324 ~~~dg~v~iw~~~~~~~ 340 (351)
T 3f3f_A 324 AGDDGKVRLWKATYSNE 340 (351)
T ss_dssp EETTSCEEEEEECTTSC
T ss_pred ecCCCcEEEEecCcCcc
Confidence 99999999999987643
No 72
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.97 E-value=3.2e-28 Score=243.04 Aligned_cols=225 Identities=34% Similarity=0.556 Sum_probs=201.0
Q ss_pred EEEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC-------------------CCCCCCCCEEEEEECCCeEE
Q psy7057 3 KLSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND-------------------LSPGAKVNTLLSASWDMTAK 62 (557)
Q Consensus 3 kl~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~-------------------~~~~~~~~~l~sgs~Dg~i~ 62 (557)
++...+..|...|++++|+|++. |++++.|+.|++|++.. +.+ +++.+++++.|+.|+
T Consensus 50 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~ 127 (313)
T 3odt_A 50 WLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAK 127 (313)
T ss_dssp EEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEE
T ss_pred EEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEE
Confidence 45677889999999999999998 88999999999999865 222 467999999999999
Q ss_pred EEECCCCeEEEEEcccCCcEEEEEEcC-CC-EEEEEECCCeEEEEeCCCcEEEEEeC-CCCCEEEEEEeCCCeEEEEECC
Q psy7057 63 LWCLESQQCKLTIRQHEMAVWGVIQLA-NG-IIVTGCADKTIKLHSEEGEFLKTLTG-HTDCVRGLAVLNDTDFVSCSND 139 (557)
Q Consensus 63 iwd~~~~~~~~~l~~h~~~V~~l~~~~-~~-~l~sgs~dg~I~vwd~~~~~~~~l~~-h~~~V~~l~~~~~~~lvs~s~D 139 (557)
+|| .++....+..|...+.++++.| ++ .+++++.|+.|++|| .......+.. |...|.+++++|++.+++++.|
T Consensus 128 ~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d 204 (313)
T 3odt_A 128 VWK--EGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQ-NDKVIKTFSGIHNDVVRHLAVVDDGHFISCSND 204 (313)
T ss_dssp EEE--TTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEE-TTEEEEEECSSCSSCEEEEEEEETTEEEEEETT
T ss_pred EEc--CCcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEe-cCceEEEEeccCcccEEEEEEcCCCeEEEccCC
Confidence 999 6788889999999999999988 55 999999999999999 5566777776 9999999999999999999999
Q ss_pred CeEEEEECCCCeEEEEEeCCCCcEEEEEEcCC-EEEEEeCCCeEEEEECCCC---ceEeeCCccEEEEEEcCCCcEEEEE
Q psy7057 140 ASIRVWDSTTGKCVHTMYGHPNFIYSVAAHGD-LITSGGEDQCVCVYQNKAQ---NSFMIPAMSVWAVAILPNSDIVTGS 215 (557)
Q Consensus 140 g~I~vwd~~~~~~~~~~~~h~~~V~~l~~~~~-~l~s~s~Dg~I~iwd~~~~---~~~~~~~~~v~~v~~~p~g~l~sg~ 215 (557)
+.|++||+++++++..+.+|...|.++++.++ .|++++.|+.|++||+.+. ..+..|...|.+++|+|++++++++
T Consensus 205 g~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 284 (313)
T 3odt_A 205 GLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNGDIVSCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSNGDIIVGS 284 (313)
T ss_dssp SEEEEEETTTCCEEEEEECCSSCEEEEEECTTSCEEEEETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTTSCEEEEE
T ss_pred CeEEEEECCchhhhhhhhcCCceEEEEEEecCCCEEEEecCCEEEEEECCCCceeEEEeccCceEEEEEEccCCCEEEEe
Confidence 99999999999999999999999999999322 6999999999999997765 5667788899999999999999999
Q ss_pred cCCcEEEEecCCCCcch
Q psy7057 216 SDGIVRVFSANPDRQAE 232 (557)
Q Consensus 216 ~Dg~I~iwd~~~~~~~~ 232 (557)
.||.|++|++.+.+...
T Consensus 285 ~dg~i~iw~~~~~~~~~ 301 (313)
T 3odt_A 285 SDNLVRIFSQEKSRWAS 301 (313)
T ss_dssp TTSCEEEEESCGGGCCC
T ss_pred CCCcEEEEeCCCCceee
Confidence 99999999998766543
No 73
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.97 E-value=6.1e-29 Score=249.04 Aligned_cols=229 Identities=16% Similarity=0.165 Sum_probs=187.8
Q ss_pred CCCCCCCCEEEEEECCCeEEEEECCC--CeEEEEEcccCCcEEEEEEcCC--C-EEEEEECCCeEEEEeCC-C--cEEEE
Q psy7057 43 LSPGAKVNTLLSASWDMTAKLWCLES--QQCKLTIRQHEMAVWGVIQLAN--G-IIVTGCADKTIKLHSEE-G--EFLKT 114 (557)
Q Consensus 43 ~~~~~~~~~l~sgs~Dg~i~iwd~~~--~~~~~~l~~h~~~V~~l~~~~~--~-~l~sgs~dg~I~vwd~~-~--~~~~~ 114 (557)
+++++++++|++|+.|++|+||++.+ .+++.++.+|...|++++|+++ + .|++|+.|++|++||.. + ..+..
T Consensus 15 ~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~ 94 (297)
T 2pm7_B 15 AVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQIAV 94 (297)
T ss_dssp EEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCEE
T ss_pred EEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEEE
Confidence 34667899999999999999999974 3677899999999999999863 4 99999999999999954 3 35677
Q ss_pred EeCCCCCEEEEEEeCC--C-eEEEEECCCeEEEEECCCCe--EEEEEeCCCCcEEEEEEcC---------------CEEE
Q psy7057 115 LTGHTDCVRGLAVLND--T-DFVSCSNDASIRVWDSTTGK--CVHTMYGHPNFIYSVAAHG---------------DLIT 174 (557)
Q Consensus 115 l~~h~~~V~~l~~~~~--~-~lvs~s~Dg~I~vwd~~~~~--~~~~~~~h~~~V~~l~~~~---------------~~l~ 174 (557)
+.+|...|.+++|+|+ + .|++++.|++|++||++++. ....+.+|...|.+++|.+ ++|+
T Consensus 95 ~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~ 174 (297)
T 2pm7_B 95 HAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFV 174 (297)
T ss_dssp ECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC------------CCEEE
T ss_pred eecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcccccccCCCCCCcceEE
Confidence 8899999999999996 4 47899999999999998763 2456789999999999943 5899
Q ss_pred EEeCCCeEEEEECCCC-------ceEeeCCccEEEEEEcCCC---c-EEEEEcCCcEEEEecCCCCcc---hhHHHhccc
Q psy7057 175 SGGEDQCVCVYQNKAQ-------NSFMIPAMSVWAVAILPNS---D-IVTGSSDGIVRVFSANPDRQA---EDAVQAQYA 240 (557)
Q Consensus 175 s~s~Dg~I~iwd~~~~-------~~~~~~~~~v~~v~~~p~g---~-l~sg~~Dg~I~iwd~~~~~~~---~~~~~~~~~ 240 (557)
+|+.|++|++||++.. ..+..|...|++++|+|++ . |++++.|++|+||+++..... .......+.
T Consensus 175 sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~ 254 (297)
T 2pm7_B 175 TGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFP 254 (297)
T ss_dssp EEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCS
T ss_pred EEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCC
Confidence 9999999999996542 3566789999999999985 5 899999999999998764311 111113456
Q ss_pred ceeEEEeccCCCceeEEEEeCCCcEEEEecCC
Q psy7057 241 EEVKKLKSANEQEIGGVKVSDDGIVRVFSANP 272 (557)
Q Consensus 241 ~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~ 272 (557)
..+..+.+.+... .+++++.||+|+||+...
T Consensus 255 ~~v~~~~~s~~g~-~las~~~D~~v~lw~~~~ 285 (297)
T 2pm7_B 255 DVLWRASWSLSGN-VLALSGGDNKVTLWKENL 285 (297)
T ss_dssp SCEEEEEECSSSC-CEEEEETTSCEEEEEECT
T ss_pred CcEEEEEECCCCC-EEEEEcCCCcEEEEEECC
Confidence 7788888877654 589999999999999764
No 74
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.97 E-value=4.8e-28 Score=242.60 Aligned_cols=253 Identities=17% Similarity=0.243 Sum_probs=209.8
Q ss_pred EEEEEEcCCCcEEEEECCCcEEEEcCCC------------------CCCCCCCCEEEEEECCCeEEEEECCCCeEEEEEc
Q psy7057 15 VRSLSVTPDGCILSASRDKSAKLWKPND------------------LSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIR 76 (557)
Q Consensus 15 V~~l~~spdg~l~sgs~Dg~V~iWd~~~------------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~ 76 (557)
+++|+||+++.|+ ++.|++|+|||+.+ +.+++++++|++|+.|++|++|++++++++..+.
T Consensus 28 ~~~l~WS~~~~lA-vg~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~ 106 (318)
T 4ggc_A 28 LNLVDWSSGNVLA-VALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMT 106 (318)
T ss_dssp CBCEEECTTSEEE-EEETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred ceEEEECCCCEEE-EEeCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEec
Confidence 5789999987454 45699999999876 5678889999999999999999999999999999
Q ss_pred ccCCcEEEEEEcCCCEEEEEECCCeEEEEeC--CCcEEEEEeCCCCCEEEEEEeCCCe-EEEEECCCeEEEEECCCCe--
Q psy7057 77 QHEMAVWGVIQLANGIIVTGCADKTIKLHSE--EGEFLKTLTGHTDCVRGLAVLNDTD-FVSCSNDASIRVWDSTTGK-- 151 (557)
Q Consensus 77 ~h~~~V~~l~~~~~~~l~sgs~dg~I~vwd~--~~~~~~~l~~h~~~V~~l~~~~~~~-lvs~s~Dg~I~vwd~~~~~-- 151 (557)
+|...+.++.+.+ ..+++|+.++.+++|+. ....+..+.+|...+.++.+.+++. +++++.|++|++||+++++
T Consensus 107 ~h~~~~~~~~~~~-~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~ 185 (318)
T 4ggc_A 107 SHSARVGSLSWNS-YILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGG 185 (318)
T ss_dssp CCSSCEEEEEEET-TEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTB
T ss_pred CccceEEEeecCC-CEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCccc
Confidence 9999998876643 38999999999999993 4466788899999999999999876 7799999999999998764
Q ss_pred --EEEEEeCCCCcEEEEEE---cCCE--EEEEeCCCeEEEEECCCC--ceEeeCCccEEEEEEcCCCc-EEEEE--cCCc
Q psy7057 152 --CVHTMYGHPNFIYSVAA---HGDL--ITSGGEDQCVCVYQNKAQ--NSFMIPAMSVWAVAILPNSD-IVTGS--SDGI 219 (557)
Q Consensus 152 --~~~~~~~h~~~V~~l~~---~~~~--l~s~s~Dg~I~iwd~~~~--~~~~~~~~~v~~v~~~p~g~-l~sg~--~Dg~ 219 (557)
.......|...|.++.+ .+.. +++++.+++|++|+.... .....+...+..++++|++. +++++ .|+.
T Consensus 186 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~ 265 (318)
T 4ggc_A 186 WVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQ 265 (318)
T ss_dssp SCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEECSSCEEEEEEETTTTEEEEEECTTTCC
T ss_pred ccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccccceeeeeeeeecccccceEEEEEcCCCE
Confidence 34556678889999998 3333 346678899999997766 44556777899999999988 55443 7999
Q ss_pred EEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecCC
Q psy7057 220 VRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANP 272 (557)
Q Consensus 220 I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~ 272 (557)
|+|||+.+++... ...+|...|..+.+.++.. .++|+|.||+||||++.+
T Consensus 266 i~iwd~~~~~~~~--~l~gH~~~V~~l~~spdg~-~l~S~s~D~~v~iWd~~~ 315 (318)
T 4ggc_A 266 LVIWKYPTMAKVA--ELKGHTSRVLSLTMSPDGA-TVASAAADETLRLWRCFE 315 (318)
T ss_dssp EEEEETTTCCEEE--EECCCSSCEEEEEECTTSS-CEEEEETTTEEEEECCSC
T ss_pred EEEEECCCCcEEE--EEcCCCCCEEEEEEcCCCC-EEEEEecCCeEEEEECCC
Confidence 9999999877653 3456888999999887655 589999999999999864
No 75
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.97 E-value=1.2e-28 Score=249.95 Aligned_cols=259 Identities=12% Similarity=0.104 Sum_probs=214.2
Q ss_pred EEEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC-------------------CCCCCCCC-EEEEEECCCeE
Q psy7057 3 KLSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND-------------------LSPGAKVN-TLLSASWDMTA 61 (557)
Q Consensus 3 kl~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~-------------------~~~~~~~~-~l~sgs~Dg~i 61 (557)
+......+|.+.|++++|+|++. |++++.|+.|++|++.. +.+++++. +|++|+.|+.|
T Consensus 2 ~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i 81 (342)
T 1yfq_A 2 QIVQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEI 81 (342)
T ss_dssp EEEECSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCE
T ss_pred cceecccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeE
Confidence 45556679999999999999988 88999999999999764 56777899 99999999999
Q ss_pred EEEEC-CCCeEEEEEcc--cCCcEEEEEEcCCCEEEEEECCCeEEEEeC-C---------CcEEEEEeCCCCCEEEEEEe
Q psy7057 62 KLWCL-ESQQCKLTIRQ--HEMAVWGVIQLANGIIVTGCADKTIKLHSE-E---------GEFLKTLTGHTDCVRGLAVL 128 (557)
Q Consensus 62 ~iwd~-~~~~~~~~l~~--h~~~V~~l~~~~~~~l~sgs~dg~I~vwd~-~---------~~~~~~l~~h~~~V~~l~~~ 128 (557)
++|++ .+++. ..+.+ |...|.+++|+|...+++++.|+.|++||. . ++++..+. |...|.+++++
T Consensus 82 ~~wd~~~~~~~-~~~~~~~~~~~v~~l~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~ 159 (342)
T 1yfq_A 82 LKVDLIGSPSF-QALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMDTN 159 (342)
T ss_dssp EEECSSSSSSE-EECBSCCCCSCEEEEEEETTTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCCEEEEEEC
T ss_pred EEEEeccCCce-EeccccCCCCceEEEEeCCCCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCCceEEEEec
Confidence 99999 87755 77888 999999999999449999999999999993 3 44444555 88999999999
Q ss_pred CCCeEEEEECCCeEEEEECCC-Ce--EEEEEeCCCCcEEEEEEc---CCEEEEEeCCCeEEEEECCC--------C-ceE
Q psy7057 129 NDTDFVSCSNDASIRVWDSTT-GK--CVHTMYGHPNFIYSVAAH---GDLITSGGEDQCVCVYQNKA--------Q-NSF 193 (557)
Q Consensus 129 ~~~~lvs~s~Dg~I~vwd~~~-~~--~~~~~~~h~~~V~~l~~~---~~~l~s~s~Dg~I~iwd~~~--------~-~~~ 193 (557)
|++ +++++.|+.|++||+++ +. .......|...+.++++. ++++++++.|+.|++|+... . ..+
T Consensus 160 ~~~-l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~ 238 (342)
T 1yfq_A 160 SSR-LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAF 238 (342)
T ss_dssp SSE-EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEE
T ss_pred CCc-EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceee
Confidence 887 99999999999999988 54 334455788999999994 57999999999999999532 2 566
Q ss_pred eeCCc---------cEEEEEEcCCCc-EEEEEcCCcEEEEecCCCCcchhHHHhcc-cceeEEEeccCCCceeEEEEeCC
Q psy7057 194 MIPAM---------SVWAVAILPNSD-IVTGSSDGIVRVFSANPDRQAEDAVQAQY-AEEVKKLKSANEQEIGGVKVSDD 262 (557)
Q Consensus 194 ~~~~~---------~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~-~~~v~~l~~~~~~~~~~vs~s~D 262 (557)
..|.. .|.+++|+|++. |++++.||.|++||+.+++.... ...+ ...+..+. .+...+++++.|
T Consensus 239 ~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~--~~~~h~~~v~~~~---~~~~~l~s~s~D 313 (342)
T 1yfq_A 239 RCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKN--FAKFNEDSVVKIA---CSDNILCLATSD 313 (342)
T ss_dssp ECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEE--CCCCSSSEEEEEE---ECSSEEEEEEEC
T ss_pred ecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhh--hhcccCCCceEec---CCCCeEEEEecC
Confidence 66654 999999999998 99999999999999987765432 3345 67788777 445568999999
Q ss_pred Cc-EEEEe
Q psy7057 263 GI-VRVFS 269 (557)
Q Consensus 263 G~-IrvW~ 269 (557)
|. .+.|.
T Consensus 314 g~~~~~~~ 321 (342)
T 1yfq_A 314 DTFKTNAA 321 (342)
T ss_dssp THHHHCSS
T ss_pred Cccccccc
Confidence 98 55444
No 76
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.97 E-value=7.6e-29 Score=261.16 Aligned_cols=265 Identities=12% Similarity=0.190 Sum_probs=205.7
Q ss_pred cEEEEEecc------CcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC--------------------------------
Q psy7057 2 YKLSTALYG------HSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND-------------------------------- 42 (557)
Q Consensus 2 ~kl~~~l~g------H~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~-------------------------------- 42 (557)
|++.+.+.. |.+.|++++|+|+|. |++|+.||.|+||++.+
T Consensus 12 w~~~q~~~~~~~~~~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~ 91 (447)
T 3dw8_B 12 WCFSQVKGAVDDDVAEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLE 91 (447)
T ss_dssp CEEEECCSCSSSCCCGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEE
T ss_pred EEEEEecccccccccccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEeccccccccccccccccc
Confidence 555555543 678999999999998 88999999999999652
Q ss_pred -------CCCCCCC--CEEEEEECCCeEEEEECCCCeEE---------------------------------------EE
Q psy7057 43 -------LSPGAKV--NTLLSASWDMTAKLWCLESQQCK---------------------------------------LT 74 (557)
Q Consensus 43 -------~~~~~~~--~~l~sgs~Dg~i~iwd~~~~~~~---------------------------------------~~ 74 (557)
+.+++++ ..|++++.|++|++|++.++... ..
T Consensus 92 ~~~~V~~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (447)
T 3dw8_B 92 IEEKINKIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRI 171 (447)
T ss_dssp ECCCCCEEEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEE
T ss_pred ccCceEEEEEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEE
Confidence 3455666 79999999999999998764432 12
Q ss_pred -EcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeCC--CcEEE-------EEeCCCCCEEEEEEeCCC-e-EEEEECCCe
Q psy7057 75 -IRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSEE--GEFLK-------TLTGHTDCVRGLAVLNDT-D-FVSCSNDAS 141 (557)
Q Consensus 75 -l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~--~~~~~-------~l~~h~~~V~~l~~~~~~-~-lvs~s~Dg~ 141 (557)
+.+|...|.+++|+|++ .|++| .|+.|++||.. +..+. .+.+|...|++++|+|++ . |++++.|++
T Consensus 172 ~~~~h~~~v~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~ 250 (447)
T 3dw8_B 172 FANAHTYHINSISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGT 250 (447)
T ss_dssp ECSCCSSCCCEEEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSC
T ss_pred eccCCCcceEEEEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCe
Confidence 36799999999999998 88887 89999999965 33343 255899999999999986 4 789999999
Q ss_pred EEEEECCCCeE----EEEEeCCCC------------cEEEEEE--cCCEEEEEeCCCeEEEEECCC-C---ceEeeCCcc
Q psy7057 142 IRVWDSTTGKC----VHTMYGHPN------------FIYSVAA--HGDLITSGGEDQCVCVYQNKA-Q---NSFMIPAMS 199 (557)
Q Consensus 142 I~vwd~~~~~~----~~~~~~h~~------------~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~-~---~~~~~~~~~ 199 (557)
|++||+++++. +..+..|.. .|.+++| ++.+|++++. +.|++||++. . ..+..|...
T Consensus 251 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~ 329 (447)
T 3dw8_B 251 IRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYL 329 (447)
T ss_dssp EEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGG
T ss_pred EEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeeccccc
Confidence 99999999886 788888876 8999999 6779999999 9999999865 3 556666431
Q ss_pred ---------------EEEEEEcCCCc-EEEEEcCCcEEEEecCCCCcchhHH----------------------------
Q psy7057 200 ---------------VWAVAILPNSD-IVTGSSDGIVRVFSANPDRQAEDAV---------------------------- 235 (557)
Q Consensus 200 ---------------v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~~~~~~~---------------------------- 235 (557)
+..++|+|++. |++|+.||.|++||+.+++......
T Consensus 330 ~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (447)
T 3dw8_B 330 RSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDITLEASRENNKPRTVLKPRKVCASGKRKKDEIS 409 (447)
T ss_dssp TTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEEEECCSTTCCTTCBCCCCCEECSSCCCTTCEE
T ss_pred cccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCcceeeeecccccccccccCCccccccCCccccccc
Confidence 33499999998 8999999999999998765432110
Q ss_pred --HhcccceeEEEeccCCCceeEEEEeCCCcEEEEec
Q psy7057 236 --QAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSA 270 (557)
Q Consensus 236 --~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~ 270 (557)
...+...+..+.+.+... .+++++.|+ +.+|..
T Consensus 410 ~~~~~~~~~i~~~~~~p~~~-~la~~~~~~-~~~~~~ 444 (447)
T 3dw8_B 410 VDSLDFNKKILHTAWHPKEN-IIAVATTNN-LYIFQD 444 (447)
T ss_dssp GGGCCTTSCCCEEEECSSSS-EEEEECSSC-EEEEEC
T ss_pred ccccccCCceeEEEECCCCC-EEEEEecce-eeeecc
Confidence 112344567777777665 456666665 777753
No 77
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.96 E-value=2.5e-28 Score=250.34 Aligned_cols=226 Identities=15% Similarity=0.227 Sum_probs=195.3
Q ss_pred cEEEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC------------------CCCCCCCCEEEEEECCCeEE
Q psy7057 2 YKLSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND------------------LSPGAKVNTLLSASWDMTAK 62 (557)
Q Consensus 2 ~kl~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~------------------~~~~~~~~~l~sgs~Dg~i~ 62 (557)
++....+.+|...|++++|+|++. |++++.||.|++||+.+ +.+++++.+|++++.|+.|+
T Consensus 42 ~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~ 121 (372)
T 1k8k_C 42 WVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVIS 121 (372)
T ss_dssp EEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEE
T ss_pred EEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEE
Confidence 347888999999999999999998 88999999999999755 56778899999999999999
Q ss_pred EEECCCCe---EEEE-EcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeC-------------------CCcEEEEEeCC
Q psy7057 63 LWCLESQQ---CKLT-IRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSE-------------------EGEFLKTLTGH 118 (557)
Q Consensus 63 iwd~~~~~---~~~~-l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~-------------------~~~~~~~l~~h 118 (557)
+|++..+. .... ..+|...|.+++|+|++ .|++++.|+.|++||. .+.++..+.+|
T Consensus 122 i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (372)
T 1k8k_C 122 ICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSS 201 (372)
T ss_dssp EEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCC
T ss_pred EEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCC
Confidence 99998875 2333 36789999999999988 9999999999999994 36788888899
Q ss_pred CCCEEEEEEeCCCe-EEEEECCCeEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCC--C---
Q psy7057 119 TDCVRGLAVLNDTD-FVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKA--Q--- 190 (557)
Q Consensus 119 ~~~V~~l~~~~~~~-lvs~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~--~--- 190 (557)
...|.+++|+|++. |++++.|+.|++||+++++++..+..|...|.++++ ++.+++++ .|+.|++|++.. .
T Consensus 202 ~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~ 280 (372)
T 1k8k_C 202 CGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFITESSLVAAG-HDCFPVLFTYDSAAGKLS 280 (372)
T ss_dssp SSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEECSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEETTTTEEE
T ss_pred CCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEccCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccCcCceEE
Confidence 99999999999975 779999999999999999999999999999999999 45555555 999999999765 1
Q ss_pred --------------------------------------ceE-eeCCccEEEEEEc-CCC---c-EEEEEcCCcEEEEecC
Q psy7057 191 --------------------------------------NSF-MIPAMSVWAVAIL-PNS---D-IVTGSSDGIVRVFSAN 226 (557)
Q Consensus 191 --------------------------------------~~~-~~~~~~v~~v~~~-p~g---~-l~sg~~Dg~I~iwd~~ 226 (557)
..+ ..|...|++++|+ +++ . |++|+.||.|++|++.
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~ 360 (372)
T 1k8k_C 281 FGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVR 360 (372)
T ss_dssp ECCCCCCC--------CHHHHHHHCCCCC---------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHH
T ss_pred EeeccCccccchhhhcchhhhhhhcccccccccCccccccccccccCCcceeEEecCCCcceeeEEEecCCCceEEEEec
Confidence 112 3788899999966 665 5 9999999999999986
Q ss_pred CC
Q psy7057 227 PD 228 (557)
Q Consensus 227 ~~ 228 (557)
+.
T Consensus 361 ~~ 362 (372)
T 1k8k_C 361 SL 362 (372)
T ss_dssp HH
T ss_pred Ch
Confidence 53
No 78
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.96 E-value=1e-27 Score=262.55 Aligned_cols=266 Identities=19% Similarity=0.258 Sum_probs=208.4
Q ss_pred cEEEEEeccCcc---cEEEEEEcCC-Cc-EEEEECCCcEEEEcCCC--------------------CCCCCCCCEEEEEE
Q psy7057 2 YKLSTALYGHSM---DVRSLSVTPD-GC-ILSASRDKSAKLWKPND--------------------LSPGAKVNTLLSAS 56 (557)
Q Consensus 2 ~kl~~~l~gH~~---~V~~l~~spd-g~-l~sgs~Dg~V~iWd~~~--------------------~~~~~~~~~l~sgs 56 (557)
.++...+.+|.. .|++++|+|+ +. |++++.|+.|++||+.+ +.++ ++.+|++++
T Consensus 193 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~ 271 (615)
T 1pgu_A 193 FKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVG 271 (615)
T ss_dssp BEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEE
T ss_pred cceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEc
Confidence 467788999999 9999999999 88 88999999999999765 2233 678999999
Q ss_pred CCCeEEEEECCCCeEEEEEccc----CCcEEEEEEcCCCEEEEEECCCeEEEEeC-CCcEEEEEeCCCCCEEEEEE----
Q psy7057 57 WDMTAKLWCLESQQCKLTIRQH----EMAVWGVIQLANGIIVTGCADKTIKLHSE-EGEFLKTLTGHTDCVRGLAV---- 127 (557)
Q Consensus 57 ~Dg~i~iwd~~~~~~~~~l~~h----~~~V~~l~~~~~~~l~sgs~dg~I~vwd~-~~~~~~~l~~h~~~V~~l~~---- 127 (557)
.|+.|++||+.+++.+..+..+ ...+.++.+.....+++++.|+.|++||. +++++..+.+|...|.++++
T Consensus 272 ~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~l~ 351 (615)
T 1pgu_A 272 ADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYELGHDEVLKTISGHNKGITALTVNPLI 351 (615)
T ss_dssp TTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTEEEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEETTTTE
T ss_pred CCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeCCCCeEEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEecCcE
Confidence 9999999999999998888776 46788888874558999999999999984 35566666666555554444
Q ss_pred -----------------------------eCCCeEEEEE-----------------------------------------
Q psy7057 128 -----------------------------LNDTDFVSCS----------------------------------------- 137 (557)
Q Consensus 128 -----------------------------~~~~~lvs~s----------------------------------------- 137 (557)
.+...+++++
T Consensus 352 ~~~~dg~i~~w~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~ 431 (615)
T 1pgu_A 352 SGSYDGRIMEWSSSSMHQDHSNLIVSLDNSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLI 431 (615)
T ss_dssp EEETTSCEEETTTTEEECCCCSCEEEEECCSTTCCEEEETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEE
T ss_pred EECCCCeEEEEEchhhcCcccCceEEEEECCCcEEEEEeCCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEE
Confidence 2122233444
Q ss_pred --------------------------------C-CCeEEEEECCCCeEE-EEEeCCCCcEEEEEE--cCCEEEEEeCCCe
Q psy7057 138 --------------------------------N-DASIRVWDSTTGKCV-HTMYGHPNFIYSVAA--HGDLITSGGEDQC 181 (557)
Q Consensus 138 --------------------------------~-Dg~I~vwd~~~~~~~-~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~ 181 (557)
. |+.|++||+.+++.. ..+.+|...|.++++ ++++|++++.|+.
T Consensus 432 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~ 511 (615)
T 1pgu_A 432 LQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGK 511 (615)
T ss_dssp EETTTCCEEEEEECSSCEEEEEECSSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred EeccCCceeeecccCCCceEEEEcCCEEEEeecCCCeEEEEECCCccccccccCCccCceEEEEECCCCCEEEEcCCCCe
Confidence 4 555555555444433 455678899999999 7789999999999
Q ss_pred EEEEECCCCc---eEee-CCccEEEEEEcC----------CCc-EEEEEcCCcEEEEecCCC-CcchhHHHhcccceeEE
Q psy7057 182 VCVYQNKAQN---SFMI-PAMSVWAVAILP----------NSD-IVTGSSDGIVRVFSANPD-RQAEDAVQAQYAEEVKK 245 (557)
Q Consensus 182 I~iwd~~~~~---~~~~-~~~~v~~v~~~p----------~g~-l~sg~~Dg~I~iwd~~~~-~~~~~~~~~~~~~~v~~ 245 (557)
|++|++.+.. .+.. |...|++++|+| +++ |++++.||.|++|++.+. +.. .....|...+..
T Consensus 512 i~iw~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~--~~~~~h~~~v~~ 589 (615)
T 1pgu_A 512 ILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKII--KALNAHKDGVNN 589 (615)
T ss_dssp EEEEETTTTEEEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCE--EETTSSTTCEEE
T ss_pred EEEeeCCCCcceeEeecCCCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCCceec--hhhhcCccceEE
Confidence 9999987763 3344 888999999999 888 889999999999999876 332 234567788999
Q ss_pred EeccCCCceeEEEEeCCCcEEEEecCC
Q psy7057 246 LKSANEQEIGGVKVSDDGIVRVFSANP 272 (557)
Q Consensus 246 l~~~~~~~~~~vs~s~DG~IrvW~~~~ 272 (557)
+.+.+... +++++.||.|++|+++.
T Consensus 590 l~~s~~~~--l~s~~~d~~v~iw~~~~ 614 (615)
T 1pgu_A 590 LLWETPST--LVSSGADACIKRWNVVL 614 (615)
T ss_dssp EEEEETTE--EEEEETTSCEEEEEEC-
T ss_pred EEEcCCCC--eEEecCCceEEEEeeec
Confidence 99888776 89999999999999875
No 79
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.4e-27 Score=274.50 Aligned_cols=215 Identities=10% Similarity=0.046 Sum_probs=177.8
Q ss_pred EeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC---------------CCCCCCCCEEEEEECCCeEEEEECCCCe
Q psy7057 7 ALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND---------------LSPGAKVNTLLSASWDMTAKLWCLESQQ 70 (557)
Q Consensus 7 ~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~---------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~~ 70 (557)
...||.+.|++++|+|+++ ||+|+.||+|+||+... +.+++ +.+|++++.|++|++||+.+++
T Consensus 12 ~~~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~ 90 (902)
T 2oaj_A 12 NKYGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKLEDRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQK 90 (902)
T ss_dssp EEEECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEECSSCCCEEEEEEET-TTEEEEEETTCEEEEEETTTCS
T ss_pred cccCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEcCCCCCEEEEEEcC-CCEEEEEECcCeEEEEECCCCc
Confidence 3468999999999999998 88999999999999865 55666 7799999999999999999999
Q ss_pred EEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeCCCcEEE------------EEeCCCCCEEEEEEeCC--CeEEE
Q psy7057 71 CKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSEEGEFLK------------TLTGHTDCVRGLAVLND--TDFVS 135 (557)
Q Consensus 71 ~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~~~~~~------------~l~~h~~~V~~l~~~~~--~~lvs 135 (557)
++.++. |...|++++|+|++ .+++|+.||+|++||....... .+.+|...|++++|+|+ +.+++
T Consensus 91 ~~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~ 169 (902)
T 2oaj_A 91 VLTTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLI 169 (902)
T ss_dssp EEEEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEE
T ss_pred EEEEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEE
Confidence 988886 77899999999998 9999999999999996554432 23679999999999997 35889
Q ss_pred EECCCeEEEEECCCCeEEEEEeCC------------------CCcEEEEEE--cCCEEEEEeCCCeEEEEECCCCceEe-
Q psy7057 136 CSNDASIRVWDSTTGKCVHTMYGH------------------PNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQNSFM- 194 (557)
Q Consensus 136 ~s~Dg~I~vwd~~~~~~~~~~~~h------------------~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~~~~~- 194 (557)
|+.|++| +||+++++++..+..| ...|.+++| ++.+|++++.|++|++||.++.+.+.
T Consensus 170 g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~~~ 248 (902)
T 2oaj_A 170 SYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHMIMA 248 (902)
T ss_dssp ECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTCCEEEE
T ss_pred EeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEE
Confidence 9999999 9999999999998766 477999999 77899999999999999987664332
Q ss_pred -------eC-------------CccEEEEEEc----CCC-c-EEEEEcC-----CcEEEEe
Q psy7057 195 -------IP-------------AMSVWAVAIL----PNS-D-IVTGSSD-----GIVRVFS 224 (557)
Q Consensus 195 -------~~-------------~~~v~~v~~~----p~g-~-l~sg~~D-----g~I~iwd 224 (557)
.| ...|++++|+ |++ . +++|+.| ..+++|+
T Consensus 249 r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~ 309 (902)
T 2oaj_A 249 RTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMID 309 (902)
T ss_dssp ECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEE
T ss_pred EeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEe
Confidence 12 3468999995 443 3 5555554 2566665
No 80
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.96 E-value=5.7e-29 Score=295.90 Aligned_cols=270 Identities=18% Similarity=0.251 Sum_probs=235.4
Q ss_pred EEEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC---------------------------------------
Q psy7057 3 KLSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND--------------------------------------- 42 (557)
Q Consensus 3 kl~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~--------------------------------------- 42 (557)
+....+.+|.+.|++++|+|++. |++++.|++|++|++..
T Consensus 873 ~~~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 952 (1249)
T 3sfz_A 873 LKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGK 952 (1249)
T ss_dssp EEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEES
T ss_pred ceeeecCCCccceEEEEECCCCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecC
Confidence 45678899999999999999998 89999999999998531
Q ss_pred --------------CCCCCCCCEEEEEECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeC
Q psy7057 43 --------------LSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSE 107 (557)
Q Consensus 43 --------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~ 107 (557)
+++++++.++++|+.+|.|++|++.+++....+.+|...|.+++|+|++ .+++++.|+.|++||.
T Consensus 953 ~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~ 1032 (1249)
T 3sfz_A 953 TGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSEDSVIQVWNW 1032 (1249)
T ss_dssp SCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEECCCCSSCCCCEEECSSSSCEEEECSSSBEEEEET
T ss_pred cceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecccCCCceEEEEECCCCCEEEEEcCCCEEEEEEC
Confidence 4567889999999999999999999999999999999999999999998 8999999999999996
Q ss_pred CCcEEEEEeCCCCCEEEEEEeCCCeEEEEECCCeEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEE
Q psy7057 108 EGEFLKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVY 185 (557)
Q Consensus 108 ~~~~~~~l~~h~~~V~~l~~~~~~~lvs~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iw 185 (557)
.......+..|...|.++++++++.+++++.|++|++||+.+++++..+.+|...|.++++ ++..+++++.|++|++|
T Consensus 1033 ~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~s~s~d~~v~iw 1112 (1249)
T 3sfz_A 1033 QTGDYVFLQAHQETVKDFRLLQDSRLLSWSFDGTVKVWNVITGRIERDFTCHQGTVLSCAISSDATKFSSTSADKTAKIW 1112 (1249)
T ss_dssp TTTEEECCBCCSSCEEEEEECSSSEEEEEESSSEEEEEETTTTCCCEEEECCSSCCCCEEECSSSSSCEEECCSSCCCEE
T ss_pred CCCceEEEecCCCcEEEEEEcCCCcEEEEECCCcEEEEECCCCceeEEEcccCCcEEEEEECCCCCEEEEEcCCCcEEEE
Confidence 6655556778999999999999999999999999999999999999999999999999999 67799999999999999
Q ss_pred ECCCC---ceEeeCCccEEEEEEcCCCc-EEEEEcCCcEEEEecCCCCcchhH-------HHhcccceeEEEeccCCCce
Q psy7057 186 QNKAQ---NSFMIPAMSVWAVAILPNSD-IVTGSSDGIVRVFSANPDRQAEDA-------VQAQYAEEVKKLKSANEQEI 254 (557)
Q Consensus 186 d~~~~---~~~~~~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~~~~~~-------~~~~~~~~v~~l~~~~~~~~ 254 (557)
|..+. ..+..|...|++++|+|++. +++++.||.|++|++.+++..... ....+...+..+.+.++...
T Consensus 1113 d~~~~~~~~~l~~h~~~v~~~~~s~dg~~lat~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~fs~dg~~ 1192 (1249)
T 3sfz_A 1113 SFDLLSPLHELKGHNGCVRCSAFSLDGILLATGDDNGEIRIWNVSDGQLLHSCAPISVEEGTATHGGWVTDVCFSPDSKT 1192 (1249)
T ss_dssp CSSSSSCSBCCCCCSSCEEEEEECSSSSEEEEEETTSCCCEEESSSSCCCCCCCCCC-------CCSCCCEEEECTTSSC
T ss_pred ECCCcceeeeeccCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEeccccccccccccCceEEEEEECCCCCE
Confidence 97654 66778899999999999998 889999999999999877654321 22456777888988887664
Q ss_pred eEEEEeCCCcEEEEecCCChh
Q psy7057 255 GGVKVSDDGIVRVFSANPDRQ 275 (557)
Q Consensus 255 ~~vs~s~DG~IrvW~~~~~~~ 275 (557)
+++++ |.|++|++..++.
T Consensus 1193 -l~s~~--g~v~vwd~~~g~~ 1210 (1249)
T 3sfz_A 1193 -LVSAG--GYLKWWNVATGDS 1210 (1249)
T ss_dssp -EEEES--SSEEEBCSSSCBC
T ss_pred -EEECC--CeEEEEECCCCce
Confidence 45554 9999999887644
No 81
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.96 E-value=5.2e-28 Score=264.93 Aligned_cols=259 Identities=15% Similarity=0.177 Sum_probs=224.2
Q ss_pred EEEEEeccCccc-EEEEEEcC--CCc-EEEEECCCcEEEEcCC--------C----------------CCCCCCCCEEEE
Q psy7057 3 KLSTALYGHSMD-VRSLSVTP--DGC-ILSASRDKSAKLWKPN--------D----------------LSPGAKVNTLLS 54 (557)
Q Consensus 3 kl~~~l~gH~~~-V~~l~~sp--dg~-l~sgs~Dg~V~iWd~~--------~----------------~~~~~~~~~l~s 54 (557)
+..+.+.+|.+. |++++|+| +++ |++|+.||+|++||+. . +.+++++.+|++
T Consensus 54 ~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~ 133 (615)
T 1pgu_A 54 PPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCV 133 (615)
T ss_dssp CSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEE
T ss_pred ccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEE
Confidence 467789999999 99999999 998 8899999999999994 1 677889999999
Q ss_pred EECC----CeEEEEECCCCeEEEEEcccCCcEEEEEEcCCC--EEEEEECCCeEEEEe-CCCcEEEEEeCCCC---CEEE
Q psy7057 55 ASWD----MTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG--IIVTGCADKTIKLHS-EEGEFLKTLTGHTD---CVRG 124 (557)
Q Consensus 55 gs~D----g~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~--~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~---~V~~ 124 (557)
++.+ +.|++|| .++.+..+.+|...|.+++|+|++ .+++++.|+.|++|| .+++++..+.+|.. .|++
T Consensus 134 ~~~~~~~~~~v~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~ 211 (615)
T 1pgu_A 134 VGEGRDNFGVFISWD--SGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRD 211 (615)
T ss_dssp EECCSSCSEEEEETT--TCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEE
T ss_pred eccCCCCccEEEEEE--CCCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEE
Confidence 9988 6888888 667888999999999999999988 799999999999999 56678889999999 9999
Q ss_pred EEEeCC-Ce-EEEEECCCeEEEEECCCCeEEEEE-e---CCCCcEEEEEE-cCCEEEEEeCCCeEEEEECCCC---ceEe
Q psy7057 125 LAVLND-TD-FVSCSNDASIRVWDSTTGKCVHTM-Y---GHPNFIYSVAA-HGDLITSGGEDQCVCVYQNKAQ---NSFM 194 (557)
Q Consensus 125 l~~~~~-~~-lvs~s~Dg~I~vwd~~~~~~~~~~-~---~h~~~V~~l~~-~~~~l~s~s~Dg~I~iwd~~~~---~~~~ 194 (557)
++|+|+ +. +++++.|+.|++||+++++++..+ . .|...|.++++ ++.+|++++.|+.|++||+.+. ..+.
T Consensus 212 ~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~ 291 (615)
T 1pgu_A 212 VEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWT 291 (615)
T ss_dssp EEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEESSSSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred EEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEecccccccCCceEEEEEcCCCEEEEEcCCCcEEEEECCCCcEEEEEc
Confidence 999999 76 779999999999999999999999 6 89999999999 7889999999999999998766 3444
Q ss_pred eC----CccEEEEEEcCCCc-EEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEe
Q psy7057 195 IP----AMSVWAVAILPNSD-IVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFS 269 (557)
Q Consensus 195 ~~----~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~ 269 (557)
.+ ...+.++.+. ++. +++++.|+.|++|++...+.. .....+...+..+.+ +. +++++.||.|++|+
T Consensus 292 ~~~~~~~~~~~~~~~~-~~~~l~~~~~~g~i~~~d~~~~~~~--~~~~~~~~~v~~~~~-~~----l~~~~~dg~i~~w~ 363 (615)
T 1pgu_A 292 LDKQQLGNQQVGVVAT-GNGRIISLSLDGTLNFYELGHDEVL--KTISGHNKGITALTV-NP----LISGSYDGRIMEWS 363 (615)
T ss_dssp CCTTCGGGCEEEEEEE-ETTEEEEEETTSCEEEEETTEEEEE--EEECCCSSCEEEEET-TT----TEEEETTSCEEETT
T ss_pred CCCCcccCceeEEEeC-CCCeEEEEECCCCEEEEECCCCcEE--EEEeCCCCCEEEEEe-cC----cEEECCCCeEEEEE
Confidence 44 3578888886 554 999999999999999875443 233457778888888 55 78999999999998
Q ss_pred cC
Q psy7057 270 AN 271 (557)
Q Consensus 270 ~~ 271 (557)
+.
T Consensus 364 ~~ 365 (615)
T 1pgu_A 364 SS 365 (615)
T ss_dssp TT
T ss_pred ch
Confidence 76
No 82
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.96 E-value=7.6e-28 Score=269.58 Aligned_cols=222 Identities=23% Similarity=0.312 Sum_probs=185.5
Q ss_pred EEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC----------------CCCCCCCCEEEEEECCCeEEEEEC
Q psy7057 4 LSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND----------------LSPGAKVNTLLSASWDMTAKLWCL 66 (557)
Q Consensus 4 l~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~Dg~i~iwd~ 66 (557)
..+.+.+|...|++++|+|+++ |++|+.|++|+|||+.+ +++++++.+|++|+.|++|++||+
T Consensus 422 ~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~ 501 (694)
T 3dm0_A 422 AQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNT 501 (694)
T ss_dssp EEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECT
T ss_pred ccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEC
Confidence 4567899999999999999998 88999999999999876 677888999999999999999998
Q ss_pred CCCeEEEEE---cccCCcEEEEEEcCCC---EEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeCCCe-EEEEEC
Q psy7057 67 ESQQCKLTI---RQHEMAVWGVIQLANG---IIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDTD-FVSCSN 138 (557)
Q Consensus 67 ~~~~~~~~l---~~h~~~V~~l~~~~~~---~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~~~~-lvs~s~ 138 (557)
......... .+|...|.|++|+|++ .+++|+.|++|++|| ..+++...+.+|...|++++|+|++. |++|+.
T Consensus 502 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~ 581 (694)
T 3dm0_A 502 LGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGK 581 (694)
T ss_dssp TSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred CCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeC
Confidence 664433322 4688999999999975 799999999999999 45677889999999999999999976 679999
Q ss_pred CCeEEEEECCCCeEEEEEeCCCCcEEEEEEcC-CEEEEEeCCCeEEEEECCCCceEe---eC------------------
Q psy7057 139 DASIRVWDSTTGKCVHTMYGHPNFIYSVAAHG-DLITSGGEDQCVCVYQNKAQNSFM---IP------------------ 196 (557)
Q Consensus 139 Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~~~-~~l~s~s~Dg~I~iwd~~~~~~~~---~~------------------ 196 (557)
|++|++||+++++++..+. +...|.+++|++ ..+++++.++.|++||+++...+. .+
T Consensus 582 Dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp~~~~l~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 660 (694)
T 3dm0_A 582 DGVVLLWDLAEGKKLYSLE-ANSVIHALCFSPNRYWLCAATEHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKR 660 (694)
T ss_dssp TSBCEEEETTTTEEEECCB-CSSCEEEEEECSSSSEEEEEETTEEEEEETTTTEEEEEECCCCC----------------
T ss_pred CCeEEEEECCCCceEEEec-CCCcEEEEEEcCCCcEEEEEcCCCEEEEECCCCCChhhhccccccccccccccccccCCc
Confidence 9999999999999988876 456799999932 234445556779999987663221 11
Q ss_pred -CccEEEEEEcCCCc-EEEEEcCCcEEEEecC
Q psy7057 197 -AMSVWAVAILPNSD-IVTGSSDGIVRVFSAN 226 (557)
Q Consensus 197 -~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~ 226 (557)
...+.+++|+|+++ |++|+.||+|+||++.
T Consensus 661 ~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 661 KVIYCTSLNWSADGSTLFSGYTDGVIRVWGIG 692 (694)
T ss_dssp CCCCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred eeEEeeeEEEcCCCCEEEEEcCCCeEEEEecc
Confidence 11378999999999 8999999999999985
No 83
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.96 E-value=2.8e-27 Score=241.28 Aligned_cols=263 Identities=18% Similarity=0.159 Sum_probs=210.7
Q ss_pred cEEEEEeccCcccEEEEEEcCC---Cc-EEEEECCCcEEEEcCCC------------------CCCCCCCCEEEEEECCC
Q psy7057 2 YKLSTALYGHSMDVRSLSVTPD---GC-ILSASRDKSAKLWKPND------------------LSPGAKVNTLLSASWDM 59 (557)
Q Consensus 2 ~kl~~~l~gH~~~V~~l~~spd---g~-l~sgs~Dg~V~iWd~~~------------------~~~~~~~~~l~sgs~Dg 59 (557)
++..+.+.+|.+.|++++|+|+ |. |++|+.||.|++||+.+ +.+++++.+|++++.|+
T Consensus 29 ~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg 108 (368)
T 3mmy_A 29 MKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDK 108 (368)
T ss_dssp TCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTS
T ss_pred cceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCC
Confidence 4556788999999999999999 46 89999999999999874 67788999999999999
Q ss_pred eEEEEECCCCeEEEEEcccCCcEEEEEE--cCCC-EEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeCCCeEEE
Q psy7057 60 TAKLWCLESQQCKLTIRQHEMAVWGVIQ--LANG-IIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDTDFVS 135 (557)
Q Consensus 60 ~i~iwd~~~~~~~~~l~~h~~~V~~l~~--~~~~-~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~~~~lvs 135 (557)
+|++||+.+++.+. +..|...|.+++| ++++ .|++++.|+.|++|| .+++++..+..|. .+.++.+.++ .+++
T Consensus 109 ~v~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~ 185 (368)
T 3mmy_A 109 TAKMWDLSSNQAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPE-RCYCADVIYP-MAVV 185 (368)
T ss_dssp EEEEEETTTTEEEE-EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSS-CEEEEEEETT-EEEE
T ss_pred cEEEEEcCCCCcee-eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCC-CceEEEecCC-eeEE
Confidence 99999999988766 5669999999999 8887 899999999999999 5677777887664 6777777654 5778
Q ss_pred EECCCeEEEEECCCCeEEEEEe--CCCCcEEEEEE--cCC----EEEEEeCCCeEEEEECCCC------ceEeeCCc---
Q psy7057 136 CSNDASIRVWDSTTGKCVHTMY--GHPNFIYSVAA--HGD----LITSGGEDQCVCVYQNKAQ------NSFMIPAM--- 198 (557)
Q Consensus 136 ~s~Dg~I~vwd~~~~~~~~~~~--~h~~~V~~l~~--~~~----~l~s~s~Dg~I~iwd~~~~------~~~~~~~~--- 198 (557)
++.++.+++|+++......... .+...+.++++ +.. .+++++.|+.|++|++... ..+..|..
T Consensus 186 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~ 265 (368)
T 3mmy_A 186 ATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGT 265 (368)
T ss_dssp EEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC--
T ss_pred EeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecccc
Confidence 8899999999998765443332 23344444444 433 3999999999999997654 45556655
Q ss_pred ---------cEEEEEEcCCCc-EEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEE
Q psy7057 199 ---------SVWAVAILPNSD-IVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVF 268 (557)
Q Consensus 199 ---------~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW 268 (557)
.|.+++|+|++. |++++.||.|++||+.+.+... ....+...+..+.+.+... .+++++.|+..+.|
T Consensus 266 ~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~--~~~~~~~~v~~~~~s~~g~-~l~~~s~d~~~~~~ 342 (368)
T 3mmy_A 266 NTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLK--TSEQLDQPISACCFNHNGN-IFAYASSYDWSKGH 342 (368)
T ss_dssp --CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEE--ECCCCSSCEEEEEECTTSS-CEEEEECCCSTTCG
T ss_pred cccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEE--EecCCCCCceEEEECCCCC-eEEEEecccccccc
Confidence 699999999998 9999999999999999776543 2345677889998877655 58888888865555
Q ss_pred ec
Q psy7057 269 SA 270 (557)
Q Consensus 269 ~~ 270 (557)
++
T Consensus 343 ~~ 344 (368)
T 3mmy_A 343 EF 344 (368)
T ss_dssp GG
T ss_pred cc
Confidence 43
No 84
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.3e-27 Score=274.93 Aligned_cols=142 Identities=11% Similarity=0.148 Sum_probs=123.2
Q ss_pred cCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC---------------CCCCCCCCEEEEEECCCeEEEEECCCCeEE-
Q psy7057 10 GHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND---------------LSPGAKVNTLLSASWDMTAKLWCLESQQCK- 72 (557)
Q Consensus 10 gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~---------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~- 72 (557)
.|...|++|+|+| |+ |++++.|++|++||+.+ +.+++++++|++|+.||+|++||+.++++.
T Consensus 56 ~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~~~~~~~~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~ 134 (902)
T 2oaj_A 56 EDRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQKVLTTVFVPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSS 134 (902)
T ss_dssp SSCCCEEEEEEET-TTEEEEEETTCEEEEEETTTCSEEEEEECSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEE
T ss_pred CCCCCEEEEEEcC-CCEEEEEECcCeEEEEECCCCcEEEEEcCCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCcccc
Confidence 4888999999999 77 99999999999999975 677889999999999999999999988764
Q ss_pred ----------EEEcccCCcEEEEEEcCCC--EEEEEECCCeEEEEe-CCCcEEEEEeCC------------------CCC
Q psy7057 73 ----------LTIRQHEMAVWGVIQLANG--IIVTGCADKTIKLHS-EEGEFLKTLTGH------------------TDC 121 (557)
Q Consensus 73 ----------~~l~~h~~~V~~l~~~~~~--~l~sgs~dg~I~vwd-~~~~~~~~l~~h------------------~~~ 121 (557)
..+.+|...|.+++|+|++ .+++|+.|++| +|| .+++++..+..| ...
T Consensus 135 ~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~ 213 (902)
T 2oaj_A 135 FKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPK 213 (902)
T ss_dssp EEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCC
T ss_pred ceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCC
Confidence 2235689999999999963 89999999999 999 456677777765 577
Q ss_pred EEEEEEeCCCe-EEEEECCCeEEEEECCCCeEE
Q psy7057 122 VRGLAVLNDTD-FVSCSNDASIRVWDSTTGKCV 153 (557)
Q Consensus 122 V~~l~~~~~~~-lvs~s~Dg~I~vwd~~~~~~~ 153 (557)
|++++|+|++. |++++.|++|++||+++++++
T Consensus 214 V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~ 246 (902)
T 2oaj_A 214 VIQSLYHPNSLHIITIHEDNSLVFWDANSGHMI 246 (902)
T ss_dssp EEEEEECTTSSEEEEEETTCCEEEEETTTCCEE
T ss_pred eEEEEEcCCCCEEEEEECCCeEEEEECCCCcEE
Confidence 99999999976 779999999999999776554
No 85
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.96 E-value=2.3e-28 Score=249.40 Aligned_cols=215 Identities=15% Similarity=0.160 Sum_probs=187.6
Q ss_pred CcccEEEEEEcCC----Cc-EEEEECCCcEEEEcCCC----------------CCCCC-CCCEEEEEECCCeEEEEECCC
Q psy7057 11 HSMDVRSLSVTPD----GC-ILSASRDKSAKLWKPND----------------LSPGA-KVNTLLSASWDMTAKLWCLES 68 (557)
Q Consensus 11 H~~~V~~l~~spd----g~-l~sgs~Dg~V~iWd~~~----------------~~~~~-~~~~l~sgs~Dg~i~iwd~~~ 68 (557)
|...|++++|+|+ +. |++|+.||.|++||+.+ +.+++ ++.+|++++.|++|++||+.+
T Consensus 68 ~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 147 (366)
T 3k26_A 68 ADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQT 147 (366)
T ss_dssp TTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTT
T ss_pred CCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeec
Confidence 6688999999998 55 88999999999999886 66777 889999999999999999999
Q ss_pred CeEEEEE---cccCCcEEEEEEcCCC-EEEEEECCCeEEEEeCCC-cEE----------------------------EEE
Q psy7057 69 QQCKLTI---RQHEMAVWGVIQLANG-IIVTGCADKTIKLHSEEG-EFL----------------------------KTL 115 (557)
Q Consensus 69 ~~~~~~l---~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~~-~~~----------------------------~~l 115 (557)
++.+..+ .+|...|.+++|+|++ .|++++.|+.|++||... +.+ ...
T Consensus 148 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (366)
T 3k26_A 148 DTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTR 227 (366)
T ss_dssp TEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEEC
T ss_pred CeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccc
Confidence 9999988 7899999999999988 999999999999999542 222 233
Q ss_pred eCCCCCEEEEEEeCCCeEEEEECCCeEEEEECCCCe--------------EEEEEeCCCCcEEEEEE--c--CCEEEEEe
Q psy7057 116 TGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGK--------------CVHTMYGHPNFIYSVAA--H--GDLITSGG 177 (557)
Q Consensus 116 ~~h~~~V~~l~~~~~~~lvs~s~Dg~I~vwd~~~~~--------------~~~~~~~h~~~V~~l~~--~--~~~l~s~s 177 (557)
.+|...|.+++|+ ...+++++.|+.|++||+++++ .+..+..|...|.++++ + +.+|++++
T Consensus 228 ~~~~~~v~~~~~~-~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~ 306 (366)
T 3k26_A 228 DIHRNYVDCVRWL-GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGN 306 (366)
T ss_dssp SSCSSCCCEEEEE-TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEEC
T ss_pred cCCcceEEEEEEc-CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEe
Confidence 3499999999999 5568899999999999988764 47888899999999888 5 88999999
Q ss_pred CCCeEEEEECCCC-------ceEeeC--CccEEEEEEcCCCc-EEEEEcCCcEEEEecC
Q psy7057 178 EDQCVCVYQNKAQ-------NSFMIP--AMSVWAVAILPNSD-IVTGSSDGIVRVFSAN 226 (557)
Q Consensus 178 ~Dg~I~iwd~~~~-------~~~~~~--~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~ 226 (557)
.||.|++||+... ..+..| ...|++++|+|+++ |++++.||.|++||+.
T Consensus 307 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 307 QVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRL 365 (366)
T ss_dssp TTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred cCCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEec
Confidence 9999999998764 256666 68999999999998 8899999999999985
No 86
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.96 E-value=1.1e-28 Score=249.42 Aligned_cols=228 Identities=18% Similarity=0.190 Sum_probs=186.0
Q ss_pred CCCCCCCCEEEEEECCCeEEEEECCCCe--EEEEEcccCCcEEEEEEcCC--C-EEEEEECCCeEEEEeCC-C--cEEEE
Q psy7057 43 LSPGAKVNTLLSASWDMTAKLWCLESQQ--CKLTIRQHEMAVWGVIQLAN--G-IIVTGCADKTIKLHSEE-G--EFLKT 114 (557)
Q Consensus 43 ~~~~~~~~~l~sgs~Dg~i~iwd~~~~~--~~~~l~~h~~~V~~l~~~~~--~-~l~sgs~dg~I~vwd~~-~--~~~~~ 114 (557)
+++++++++|++|+.|++|+|||+.++. ++..+.+|...|++++|++. + .|++|+.|++|++||.. + ..+..
T Consensus 19 v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~ 98 (316)
T 3bg1_A 19 AQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHE 98 (316)
T ss_dssp EEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEE
T ss_pred eeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEE
Confidence 4566789999999999999999998875 56789999999999999862 4 99999999999999954 3 46778
Q ss_pred EeCCCCCEEEEEEeCC--Ce-EEEEECCCeEEEEECCCCeE---EEEEeCCCCcEEEEEEcC------------------
Q psy7057 115 LTGHTDCVRGLAVLND--TD-FVSCSNDASIRVWDSTTGKC---VHTMYGHPNFIYSVAAHG------------------ 170 (557)
Q Consensus 115 l~~h~~~V~~l~~~~~--~~-lvs~s~Dg~I~vwd~~~~~~---~~~~~~h~~~V~~l~~~~------------------ 170 (557)
+.+|...|++++|+|+ +. |++|+.|++|++||++.+.. ...+.+|...|.+++|.+
T Consensus 99 ~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (316)
T 3bg1_A 99 HAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNY 178 (316)
T ss_dssp ECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCC
T ss_pred ccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCccccccccccCccc
Confidence 8899999999999997 44 78999999999999987532 344568999999998832
Q ss_pred -CEEEEEeCCCeEEEEECCCC------ceEeeCCccEEEEEEcCCC----c-EEEEEcCCcEEEEecCCCCc--chhHHH
Q psy7057 171 -DLITSGGEDQCVCVYQNKAQ------NSFMIPAMSVWAVAILPNS----D-IVTGSSDGIVRVFSANPDRQ--AEDAVQ 236 (557)
Q Consensus 171 -~~l~s~s~Dg~I~iwd~~~~------~~~~~~~~~v~~v~~~p~g----~-l~sg~~Dg~I~iwd~~~~~~--~~~~~~ 236 (557)
.+|++|+.|++|++||.+.. ..+..|...|++++|+|++ . |++++.|++|++|++..... ......
T Consensus 179 ~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~ 258 (316)
T 3bg1_A 179 IKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLL 258 (316)
T ss_dssp CCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEE
T ss_pred cceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhh
Confidence 57999999999999997532 3456788999999999986 4 89999999999999876211 111122
Q ss_pred hcccceeEEEeccCCCceeEEEEeCCCcEEEEecC
Q psy7057 237 AQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSAN 271 (557)
Q Consensus 237 ~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~ 271 (557)
..+...+..+.+.+... .+++++.||+|+||+..
T Consensus 259 ~~~~~~v~~v~~sp~g~-~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 259 HKFNDVVWHVSWSITAN-ILAVSGGDNKVTLWKES 292 (316)
T ss_dssp EECSSCEEEEEECTTTC-CEEEEESSSCEEEEEEC
T ss_pred hcCCCcEEEEEEcCCCC-EEEEEcCCCeEEEEEEC
Confidence 34667888888877654 58999999999999865
No 87
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.96 E-value=4.1e-28 Score=253.18 Aligned_cols=257 Identities=18% Similarity=0.208 Sum_probs=209.4
Q ss_pred cEEEEEEcCCCc--EEEEECCCcEEEEcCCC--------------------CCCCC-CCCEEEEEECCCeEEEEECCCC-
Q psy7057 14 DVRSLSVTPDGC--ILSASRDKSAKLWKPND--------------------LSPGA-KVNTLLSASWDMTAKLWCLESQ- 69 (557)
Q Consensus 14 ~V~~l~~spdg~--l~sgs~Dg~V~iWd~~~--------------------~~~~~-~~~~l~sgs~Dg~i~iwd~~~~- 69 (557)
....++++|+.. +++++.||.|+||++.. +.+++ ++.+|++|+.|++|++|++.++
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~ 115 (402)
T 2aq5_A 36 DSGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGG 115 (402)
T ss_dssp SSCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTC
T ss_pred CCCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCC
Confidence 445688898876 34689999999999744 56677 8899999999999999999987
Q ss_pred ------eEEEEEcccCCcEEEEEEcCCC--EEEEEECCCeEEEEe-CCCcEEEEE--eCCCCCEEEEEEeCCCe-EEEEE
Q psy7057 70 ------QCKLTIRQHEMAVWGVIQLANG--IIVTGCADKTIKLHS-EEGEFLKTL--TGHTDCVRGLAVLNDTD-FVSCS 137 (557)
Q Consensus 70 ------~~~~~l~~h~~~V~~l~~~~~~--~l~sgs~dg~I~vwd-~~~~~~~~l--~~h~~~V~~l~~~~~~~-lvs~s 137 (557)
+++..+.+|...|.+++|+|++ .|++++.|+.|++|| .+++.+..+ .+|...|.+++|+|++. |++++
T Consensus 116 ~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 195 (402)
T 2aq5_A 116 LVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSC 195 (402)
T ss_dssp CSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEE
T ss_pred CccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEe
Confidence 6678899999999999999986 899999999999999 567778888 78999999999999976 88999
Q ss_pred CCCeEEEEECCCCeEEEEE-eCCCCc-EEEEEE--cCCEEEEE---eCCCeEEEEECCCCc----eEe-eCCccEEEEEE
Q psy7057 138 NDASIRVWDSTTGKCVHTM-YGHPNF-IYSVAA--HGDLITSG---GEDQCVCVYQNKAQN----SFM-IPAMSVWAVAI 205 (557)
Q Consensus 138 ~Dg~I~vwd~~~~~~~~~~-~~h~~~-V~~l~~--~~~~l~s~---s~Dg~I~iwd~~~~~----~~~-~~~~~v~~v~~ 205 (557)
.|+.|++||+++++++..+ .+|... +.++.| ++.+|++| +.|+.|++||++... ... .+...+.+++|
T Consensus 196 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~ 275 (402)
T 2aq5_A 196 RDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFF 275 (402)
T ss_dssp TTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEE
T ss_pred cCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEE
Confidence 9999999999999999998 788775 888888 66678888 799999999976641 222 35678999999
Q ss_pred cCCCc-EE-EEEcCCcEEEEecCCCCc-chhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecCCC
Q psy7057 206 LPNSD-IV-TGSSDGIVRVFSANPDRQ-AEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPD 273 (557)
Q Consensus 206 ~p~g~-l~-sg~~Dg~I~iwd~~~~~~-~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~~ 273 (557)
+|++. ++ +++.|+.|++|++.+... ........+...+..+.+.+.... .++.|+.+++|++.++
T Consensus 276 s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~---~~s~~~~~~~~~l~~~ 343 (402)
T 2aq5_A 276 DPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKRGL---EVNKCEIARFYKLHER 343 (402)
T ss_dssp ETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEECCSSCCSEEEECCGGGS---CGGGTEEEEEEEEETT
T ss_pred cCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccccCCcccceEEeccccc---ceecceeEEEEEcCCC
Confidence 99998 54 455799999999988763 211111124467778887776543 2357889999998764
No 88
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.96 E-value=1.1e-28 Score=254.43 Aligned_cols=221 Identities=12% Similarity=0.180 Sum_probs=180.3
Q ss_pred EEEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC-------------------CCCCCCCCEEEEEECCCeEE
Q psy7057 3 KLSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND-------------------LSPGAKVNTLLSASWDMTAK 62 (557)
Q Consensus 3 kl~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~-------------------~~~~~~~~~l~sgs~Dg~i~ 62 (557)
++...+.+|.+.|++++|+|+++ |++++.|++|++||+.+ +.+++++.+|++++.|++|+
T Consensus 46 ~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~ 125 (377)
T 3dwl_C 46 KHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVIS 125 (377)
T ss_dssp EECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEE
T ss_pred EEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEE
Confidence 56678899999999999999998 99999999999999764 56778899999999999999
Q ss_pred EEECCCCe---EEEEEcc-cCCcEEEEEEcCCC-EEEEEECCCeEEEEeCC-------------------CcEEEEEeCC
Q psy7057 63 LWCLESQQ---CKLTIRQ-HEMAVWGVIQLANG-IIVTGCADKTIKLHSEE-------------------GEFLKTLTGH 118 (557)
Q Consensus 63 iwd~~~~~---~~~~l~~-h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~-------------------~~~~~~l~~h 118 (557)
+||+++++ ....+.. |...|.+++|+|++ .|++++.|++|++||.. +.++..+ +|
T Consensus 126 iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 204 (377)
T 3dwl_C 126 VCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PS 204 (377)
T ss_dssp ECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CC
T ss_pred EEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cC
Confidence 99999876 3677887 99999999999998 99999999999999953 4456666 89
Q ss_pred CCCEEEEEEeCCCe-EEEEECCCeEEEEECCCCeE----EEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCC-C
Q psy7057 119 TDCVRGLAVLNDTD-FVSCSNDASIRVWDSTTGKC----VHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKA-Q 190 (557)
Q Consensus 119 ~~~V~~l~~~~~~~-lvs~s~Dg~I~vwd~~~~~~----~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~-~ 190 (557)
...|.+++|+|++. |++++.|++|++||++++++ +..+.+|...|.+++| ++.+|++++.++.+ +|+... .
T Consensus 205 ~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~~~~ 283 (377)
T 3dwl_C 205 GGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGYNYSPI-LLQGNESG 283 (377)
T ss_dssp SSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEESSSSEE-EECCCC--
T ss_pred CceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEcCCcEE-EEEeCCCc
Confidence 99999999999977 78999999999999999877 7888999999999999 66778888766666 665321 0
Q ss_pred ----ce----------------------------------E----------------eeCCccEEEEEEcCCC-----cE
Q psy7057 191 ----NS----------------------------------F----------------MIPAMSVWAVAILPNS-----DI 211 (557)
Q Consensus 191 ----~~----------------------------------~----------------~~~~~~v~~v~~~p~g-----~l 211 (557)
.. + ..|...|.++++.+.. .|
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~H~~~i~~~~~~~~~~~~~~~~ 363 (377)
T 3dwl_C 284 WAHTRDLDAGTSKTSFTHTGNTGEGREEEGPVSFTALRSTFRNMDLKGSSQSISSLPTVHQNMIATLRPYAGTPGNITAF 363 (377)
T ss_dssp -CCSBCCCSCCCCCCBSSSSSBCCCCCC-------------------------CCCSSSCSSCEEEEEEEEEETTEEEEE
T ss_pred eEEEeeecccccccccccccccccccccccccccccccccccchhhccccccccccCccccceeEEEeccCCCCCceEEE
Confidence 00 0 1277889999977654 39
Q ss_pred EEEEcCCcEEEEec
Q psy7057 212 VTGSSDGIVRVFSA 225 (557)
Q Consensus 212 ~sg~~Dg~I~iwd~ 225 (557)
++|+.||.|++|++
T Consensus 364 ~s~g~Dg~i~iWdl 377 (377)
T 3dwl_C 364 TSSGTDGRVVLWTL 377 (377)
T ss_dssp EEEETTSEEEEECC
T ss_pred EeecCCCcEEEecC
Confidence 99999999999985
No 89
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.96 E-value=1.1e-26 Score=244.11 Aligned_cols=223 Identities=17% Similarity=0.264 Sum_probs=188.5
Q ss_pred EeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC--------------CCCCCCCCEEEEEECCCeEEEEECCCC-e
Q psy7057 7 ALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND--------------LSPGAKVNTLLSASWDMTAKLWCLESQ-Q 70 (557)
Q Consensus 7 ~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~--------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~-~ 70 (557)
.+.+|...|++|+|+|+|+ |++|+.||+|+|||+.+ .+...++..|++|+.|+.+++|+.... .
T Consensus 142 ~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~~~~l~sgs~d~~i~~~d~~~~~~ 221 (420)
T 4gga_A 142 QMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEH 221 (420)
T ss_dssp ECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSC
T ss_pred EecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEeeCCCEEEEEeCCCceeEeeecccce
Confidence 3457888999999999998 89999999999999987 223345789999999999999998764 5
Q ss_pred EEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeCC-C----cEEEEEeCCCCCEEEEEEeCCCe--EEE--EECCC
Q psy7057 71 CKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSEE-G----EFLKTLTGHTDCVRGLAVLNDTD--FVS--CSNDA 140 (557)
Q Consensus 71 ~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~-~----~~~~~l~~h~~~V~~l~~~~~~~--lvs--~s~Dg 140 (557)
.+.++.+|...++++.++|++ .+++++.|+.+++|+.. + ..+.....|...|.+++|+|.+. +++ |+.|+
T Consensus 222 ~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~ 301 (420)
T 4gga_A 222 HVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDR 301 (420)
T ss_dssp EEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTC
T ss_pred eeEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCC
Confidence 678889999999999999988 99999999999999932 2 24567788999999999999743 443 45899
Q ss_pred eEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEe--CCCeEEEEECCCC---ceEeeCCccEEEEEEcCCCc-EE
Q psy7057 141 SIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGG--EDQCVCVYQNKAQ---NSFMIPAMSVWAVAILPNSD-IV 212 (557)
Q Consensus 141 ~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s--~Dg~I~iwd~~~~---~~~~~~~~~v~~v~~~p~g~-l~ 212 (557)
+|++||+.+++++..+..| ..+.++.+ +++.+++++ .|+.|++||..+. ..+.+|...|++++|+|+|. |+
T Consensus 302 ~I~iwd~~t~~~~~~~~~~-~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~ 380 (420)
T 4gga_A 302 HIRIWNVCSGACLSAVDAH-SQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVA 380 (420)
T ss_dssp EEEEEETTTTEEEEEEECS-SCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEE
T ss_pred EEEEEeCCccccceeeccc-cceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEE
Confidence 9999999999999998865 45667777 667777655 7999999998766 66778999999999999998 99
Q ss_pred EEEcCCcEEEEecCCCCc
Q psy7057 213 TGSSDGIVRVFSANPDRQ 230 (557)
Q Consensus 213 sg~~Dg~I~iwd~~~~~~ 230 (557)
+|+.|++||||++....+
T Consensus 381 S~s~D~tvriWdv~~~~~ 398 (420)
T 4gga_A 381 SAAADETLRLWRCFELDP 398 (420)
T ss_dssp EEETTTEEEEECCSCSSC
T ss_pred EEecCCeEEEEECCCCCc
Confidence 999999999999876544
No 90
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.96 E-value=6e-27 Score=244.51 Aligned_cols=224 Identities=18% Similarity=0.201 Sum_probs=191.8
Q ss_pred EEEecc-CcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC----------------CCCCCCCCEEEEEECCCeEEEEEC
Q psy7057 5 STALYG-HSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND----------------LSPGAKVNTLLSASWDMTAKLWCL 66 (557)
Q Consensus 5 ~~~l~g-H~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~Dg~i~iwd~ 66 (557)
...+.. |...|++++|+|++. |++|+.||.|++||+.+ +.+ ++..|++|+.|+.|++||+
T Consensus 126 ~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~ 203 (401)
T 4aez_A 126 SALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSW--NRHVLSSGSRSGAIHHHDV 203 (401)
T ss_dssp EEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEET
T ss_pred eEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEE--CCCEEEEEcCCCCEEEEec
Confidence 344444 899999999999998 88999999999999876 333 4689999999999999999
Q ss_pred C-CCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeCCCe--EEEEE--CC
Q psy7057 67 E-SQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDTD--FVSCS--ND 139 (557)
Q Consensus 67 ~-~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~~~~--lvs~s--~D 139 (557)
. .......+.+|...|.+++|+|++ .|++|+.|+.|++|| .++.++..+..|...|.+++|+|++. +++++ .|
T Consensus 204 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d 283 (401)
T 4aez_A 204 RIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMD 283 (401)
T ss_dssp TSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTT
T ss_pred ccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCC
Confidence 8 567788899999999999999988 999999999999999 45778888999999999999999753 44554 79
Q ss_pred CeEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEe--CCCeEEEEECCCC-----ceEeeCCccEEEEEEcCCCc
Q psy7057 140 ASIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGG--EDQCVCVYQNKAQ-----NSFMIPAMSVWAVAILPNSD 210 (557)
Q Consensus 140 g~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s--~Dg~I~iwd~~~~-----~~~~~~~~~v~~v~~~p~g~ 210 (557)
+.|++||+++++++..+. +...|.+++| ++..+++++ .|+.|++|++... ..+..|...|.+++|+|++.
T Consensus 284 ~~i~i~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~ 362 (401)
T 4aez_A 284 KQIHFWNAATGARVNTVD-AGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGR 362 (401)
T ss_dssp CEEEEEETTTCCEEEEEE-CSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSS
T ss_pred CEEEEEECCCCCEEEEEe-CCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCC
Confidence 999999999999998886 6778999999 677888854 8999999997663 33567888999999999998
Q ss_pred -EEEEEcCCcEEEEecCCCCcc
Q psy7057 211 -IVTGSSDGIVRVFSANPDRQA 231 (557)
Q Consensus 211 -l~sg~~Dg~I~iwd~~~~~~~ 231 (557)
+++++.||.|++|++.+++..
T Consensus 363 ~l~s~~~dg~i~iw~~~~~~~~ 384 (401)
T 4aez_A 363 ILSTAASDENLKFWRVYDGDHV 384 (401)
T ss_dssp EEEEECTTSEEEEEECCC----
T ss_pred EEEEEeCCCcEEEEECCCCccc
Confidence 889999999999999877654
No 91
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.96 E-value=5.8e-28 Score=250.30 Aligned_cols=226 Identities=15% Similarity=0.238 Sum_probs=195.5
Q ss_pred EEEEEeccCcccEEEEEEcCC----C---c-EEEEECCCcEEEEcCCC--------------------------CCCC--
Q psy7057 3 KLSTALYGHSMDVRSLSVTPD----G---C-ILSASRDKSAKLWKPND--------------------------LSPG-- 46 (557)
Q Consensus 3 kl~~~l~gH~~~V~~l~~spd----g---~-l~sgs~Dg~V~iWd~~~--------------------------~~~~-- 46 (557)
++...+.+|...|++++|+|+ + . |++++.|+.|++|++.+ +.++
T Consensus 53 ~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 132 (397)
T 1sq9_A 53 DKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGAS 132 (397)
T ss_dssp GGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECC
T ss_pred CcceEEecCCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeec
Confidence 456788899999999999999 8 7 88999999999998542 3445
Q ss_pred --CCCCE-EEEEECCCeEEEEECCC------CeEEE-----EE-------cccCCcEEEEEEcCCCEEEEEECCCeEEEE
Q psy7057 47 --AKVNT-LLSASWDMTAKLWCLES------QQCKL-----TI-------RQHEMAVWGVIQLANGIIVTGCADKTIKLH 105 (557)
Q Consensus 47 --~~~~~-l~sgs~Dg~i~iwd~~~------~~~~~-----~l-------~~h~~~V~~l~~~~~~~l~sgs~dg~I~vw 105 (557)
+++.. |++++.|+.|++||+.+ ++.+. .+ ..|...|.+++|+|++.+++++.|+.|++|
T Consensus 133 ~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~i~ 212 (397)
T 1sq9_A 133 NDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERGLIATGFNNGTVQIS 212 (397)
T ss_dssp C----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTSEEEEECTTSEEEEE
T ss_pred cCCCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCceEEEEeCCCcEEEE
Confidence 78899 99999999999999988 55544 66 448999999999998888999999999999
Q ss_pred e-CCCcEEEEEeC---C---CCCEEEEEEeCCCe-EEEEECC---CeEEEEECCCCeEEEEEeC-------------CCC
Q psy7057 106 S-EEGEFLKTLTG---H---TDCVRGLAVLNDTD-FVSCSND---ASIRVWDSTTGKCVHTMYG-------------HPN 161 (557)
Q Consensus 106 d-~~~~~~~~l~~---h---~~~V~~l~~~~~~~-lvs~s~D---g~I~vwd~~~~~~~~~~~~-------------h~~ 161 (557)
| .+++++..+.. | ...|.+++|+|++. |++++.| +.|++||+++++++..+.+ |..
T Consensus 213 d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (397)
T 1sq9_A 213 ELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSS 292 (397)
T ss_dssp ETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSS
T ss_pred ECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCC
Confidence 9 45778888888 9 99999999999976 6799999 9999999999999999998 999
Q ss_pred cEEEEEE--cCCEEEEEeCCCeEEEEECCCC---ceEe------eC---------------CccEEEEEEcCCC------
Q psy7057 162 FIYSVAA--HGDLITSGGEDQCVCVYQNKAQ---NSFM------IP---------------AMSVWAVAILPNS------ 209 (557)
Q Consensus 162 ~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~---~~~~------~~---------------~~~v~~v~~~p~g------ 209 (557)
.|.+++| ++++|++++.|+.|++||+... ..+. .| ...|++++|+|++
T Consensus 293 ~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~ 372 (397)
T 1sq9_A 293 WVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMG 372 (397)
T ss_dssp CEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTT
T ss_pred cEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEecccccccccc
Confidence 9999999 6789999999999999998766 5555 56 8899999999997
Q ss_pred ----c-EEEEEcCCcEEEEecCCC
Q psy7057 210 ----D-IVTGSSDGIVRVFSANPD 228 (557)
Q Consensus 210 ----~-l~sg~~Dg~I~iwd~~~~ 228 (557)
. |++++.||.|++|++.++
T Consensus 373 ~~~~~~l~s~~~dg~i~iw~~~~g 396 (397)
T 1sq9_A 373 ADLNESLCCVCLDRSIRWFREAGG 396 (397)
T ss_dssp CTTSCEEEEEETTTEEEEEEEEC-
T ss_pred ccccceEEEecCCCcEEEEEcCCC
Confidence 5 899999999999998764
No 92
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.4e-26 Score=236.15 Aligned_cols=225 Identities=19% Similarity=0.208 Sum_probs=199.7
Q ss_pred EEEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC---------------CCCCCCCCEEEEEECC-----CeE
Q psy7057 3 KLSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND---------------LSPGAKVNTLLSASWD-----MTA 61 (557)
Q Consensus 3 kl~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~---------------~~~~~~~~~l~sgs~D-----g~i 61 (557)
+....+.+|.+.|++++|+|+++ |++++.||+|++||+.+ +.+++++.++++++.+ +.|
T Consensus 65 ~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i 144 (369)
T 3zwl_B 65 ERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATWKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSI 144 (369)
T ss_dssp CEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSCEEEEEECTTSSEEEEEECCBTTBCCEE
T ss_pred hhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCeEEEEEccCCCEEEEecCCccCCCCEE
Confidence 46788999999999999999998 88999999999999876 6778899999999999 999
Q ss_pred EEEECCCCe-----------EEEEEcccCC--cEEEEEEcCCC-EEEEEECCCeEEEEeCC--CcEEEEEeCCCCCEEEE
Q psy7057 62 KLWCLESQQ-----------CKLTIRQHEM--AVWGVIQLANG-IIVTGCADKTIKLHSEE--GEFLKTLTGHTDCVRGL 125 (557)
Q Consensus 62 ~iwd~~~~~-----------~~~~l~~h~~--~V~~l~~~~~~-~l~sgs~dg~I~vwd~~--~~~~~~l~~h~~~V~~l 125 (557)
++|++.... ....+..|.. .+.+++|+|++ .+++++.|+.|++||.. ...+..+..|...|.++
T Consensus 145 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~ 224 (369)
T 3zwl_B 145 NIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDM 224 (369)
T ss_dssp EEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEE
T ss_pred EEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEE
Confidence 999987653 3445556666 99999999988 99999999999999954 57888899999999999
Q ss_pred EEeCCCe-EEEEECCCeEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCC--------------eEEEEECC
Q psy7057 126 AVLNDTD-FVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQ--------------CVCVYQNK 188 (557)
Q Consensus 126 ~~~~~~~-lvs~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg--------------~I~iwd~~ 188 (557)
+|+|++. |++++.|+.|++||+++++++..+. +...+.++++ ++.++++++.++ .+++||..
T Consensus 225 ~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~ 303 (369)
T 3zwl_B 225 QFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYE-TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKI 303 (369)
T ss_dssp EECTTSSEEEEEETTSEEEEEETTTCCEEEEEE-CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETT
T ss_pred EECCCCCEEEEecCCceEEEEECCCCceeeeec-CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecC
Confidence 9999976 7799999999999999999998887 7888999999 678999999888 89999976
Q ss_pred CC---ceEeeCCccEEEEEEcCCCc-EEEEEcCCcEEEEecCCC
Q psy7057 189 AQ---NSFMIPAMSVWAVAILPNSD-IVTGSSDGIVRVFSANPD 228 (557)
Q Consensus 189 ~~---~~~~~~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~ 228 (557)
.. ..+..|...|.+++|+|+++ |++++.||.|++|+++..
T Consensus 304 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~ 347 (369)
T 3zwl_B 304 FEEEIGRVQGHFGPLNTVAISPQGTSYASGGEDGFIRLHHFEKS 347 (369)
T ss_dssp TCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEEECHH
T ss_pred CCcchhheecccCcEEEEEECCCCCEEEEEcCCCeEEEEECccc
Confidence 65 56677899999999999998 889999999999999754
No 93
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.96 E-value=3.3e-27 Score=242.86 Aligned_cols=261 Identities=14% Similarity=0.059 Sum_probs=189.7
Q ss_pred EEEeccCcccEEEEEEcCCCcEEEEECCCcEEEEcCCC--------------CCCCCCCCEE-EEEECCCeEEEEECCCC
Q psy7057 5 STALYGHSMDVRSLSVTPDGCILSASRDKSAKLWKPND--------------LSPGAKVNTL-LSASWDMTAKLWCLESQ 69 (557)
Q Consensus 5 ~~~l~gH~~~V~~l~~spdg~l~sgs~Dg~V~iWd~~~--------------~~~~~~~~~l-~sgs~Dg~i~iwd~~~~ 69 (557)
...+.+|.+.|++++|+|||++++++.+..+++|++.. +.+.+..+.+ ++++.|++|++||+.++
T Consensus 12 ~~~~~~h~~~V~~v~fs~dg~~la~g~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~ 91 (355)
T 3vu4_A 12 IVPENHVSNPVTDYEFNQDQSCLILSTLKSFEIYNVHPVAHIMSQEMRHLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKK 91 (355)
T ss_dssp -------CCCCCEEEECTTSSEEEEECSSEEEEEEETTEEEEEEEECSCCCEEEECTTSSEEEEECSSTTEEEEEETTTT
T ss_pred ccccccCCCceEEEEECCCCCEEEEEcCCEEEEEecCCcceeeeeecCCeEEEEEcCCCCEEEEEECCccEEEEEECCCC
Confidence 34568899999999999999944444455689999776 2333445666 66788899999999999
Q ss_pred eEEEEEcccCCcEEEEEEcCCCEEEEEECCCeEEEEeCCC--cEEEEEeCCCCCEEEEEEeCCCeEEE--EECCCeEEEE
Q psy7057 70 QCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHSEEG--EFLKTLTGHTDCVRGLAVLNDTDFVS--CSNDASIRVW 145 (557)
Q Consensus 70 ~~~~~l~~h~~~V~~l~~~~~~~l~sgs~dg~I~vwd~~~--~~~~~l~~h~~~V~~l~~~~~~~lvs--~s~Dg~I~vw 145 (557)
+++..+. |...|.+++++++..+++ .|+.|++||... +.+..+.. ....+++++ ..++. |+.||.|++|
T Consensus 92 ~~~~~~~-~~~~v~~v~~~~~~~~~~--~~~~i~i~d~~~~~~~~~~~~~---~~~~~~~s~-~~la~~sg~~~g~v~iw 164 (355)
T 3vu4_A 92 QDVSRIK-VDAPVKDLFLSREFIVVS--YGDVISVFKFGNPWKRITDDIR---FGGVCEFSN-GLLVYSNEFNLGQIHIT 164 (355)
T ss_dssp EEEEEEE-CSSCEEEEEECSSEEEEE--ETTEEEEEESSTTCCBSSCCEE---EEEEEEEET-TEEEEEESSCTTCEEEE
T ss_pred cEEEEEE-CCCceEEEEEcCCEEEEE--EcCEEEEEECCCCceeeEEecc---CCceEEEEc-cEEEEeCCCcCcEEEEE
Confidence 9998887 677999999998764443 488999999543 34444443 444556666 55554 6899999999
Q ss_pred ECCCCe----------------EEEEEeCCCCcEEEEEE--cCCEEEEEeCCCe-EEEEECCCC---ceEe-e-CCccEE
Q psy7057 146 DSTTGK----------------CVHTMYGHPNFIYSVAA--HGDLITSGGEDQC-VCVYQNKAQ---NSFM-I-PAMSVW 201 (557)
Q Consensus 146 d~~~~~----------------~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~-I~iwd~~~~---~~~~-~-~~~~v~ 201 (557)
|+++++ ++..+.+|...|.+++| ++.+|++|+.|++ |++||+++. ..+. + |...|+
T Consensus 165 d~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~ 244 (355)
T 3vu4_A 165 KLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDRADVV 244 (355)
T ss_dssp ECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCCSCEE
T ss_pred ECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCCcEE
Confidence 998765 27888999999999999 7789999999998 999998765 4555 3 888999
Q ss_pred EEEEcCCCc-EEEEEcCCcEEEEecCCCCcchhHHHhc---------------------ccceeEEEeccCCCceeEEEE
Q psy7057 202 AVAILPNSD-IVTGSSDGIVRVFSANPDRQAEDAVQAQ---------------------YAEEVKKLKSANEQEIGGVKV 259 (557)
Q Consensus 202 ~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~~~~~~~~~~---------------------~~~~v~~l~~~~~~~~~~vs~ 259 (557)
+++|+|++. |++++.|++|++|++............. .......+.+.++ ...++++
T Consensus 245 ~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d-~~~l~~~ 323 (355)
T 3vu4_A 245 DMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISE-SSLVVVW 323 (355)
T ss_dssp EEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSS-SEEEEEE
T ss_pred EEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCC-CCEEEEE
Confidence 999999998 8899999999999997653221111100 0011133444444 4468889
Q ss_pred eCCCcEEEEecCCC
Q psy7057 260 SDDGIVRVFSANPD 273 (557)
Q Consensus 260 s~DG~IrvW~~~~~ 273 (557)
+.||.+++|++.++
T Consensus 324 ~~dg~~~~~~~~~~ 337 (355)
T 3vu4_A 324 PHTRMIETFKVVFD 337 (355)
T ss_dssp TTTTEEEEEEEEEE
T ss_pred eCCCeEEEEEEEcC
Confidence 99999999997754
No 94
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.96 E-value=2e-27 Score=241.89 Aligned_cols=221 Identities=14% Similarity=0.224 Sum_probs=185.1
Q ss_pred ccCcccEEEEEEcCC---Cc-EEEEECCCcEEEEcCCC-----------------C------CCCCCCCEEEEEECCCeE
Q psy7057 9 YGHSMDVRSLSVTPD---GC-ILSASRDKSAKLWKPND-----------------L------SPGAKVNTLLSASWDMTA 61 (557)
Q Consensus 9 ~gH~~~V~~l~~spd---g~-l~sgs~Dg~V~iWd~~~-----------------~------~~~~~~~~l~sgs~Dg~i 61 (557)
.+|...|++++|+|+ +. |++|+.||.|++||+.+ + ++++++..|++++.|++|
T Consensus 62 ~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i 141 (357)
T 3i2n_A 62 IEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTV 141 (357)
T ss_dssp EEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCE
T ss_pred ecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeE
Confidence 379999999999998 46 99999999999999875 2 567889999999999999
Q ss_pred EEEECCCCe-EEEEEcccCC----cEEEEE----EcCCC-EEEEEECCCeEEEEeCCCcEEEEEeCCCCCEEEEEEeC--
Q psy7057 62 KLWCLESQQ-CKLTIRQHEM----AVWGVI----QLANG-IIVTGCADKTIKLHSEEGEFLKTLTGHTDCVRGLAVLN-- 129 (557)
Q Consensus 62 ~iwd~~~~~-~~~~l~~h~~----~V~~l~----~~~~~-~l~sgs~dg~I~vwd~~~~~~~~l~~h~~~V~~l~~~~-- 129 (557)
++||+.+++ ++..+..|.. .+.+++ |++++ .+++++.|+.|++||...........|...|.+++|+|
T Consensus 142 ~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~ 221 (357)
T 3i2n_A 142 KVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWETNIKNGVCSLEFDRKD 221 (357)
T ss_dssp EEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEESCSS
T ss_pred EEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeeecCCCCceEEEEcCCCC
Confidence 999999886 6777766654 899998 56777 99999999999999966655566677999999999998
Q ss_pred -CCe-EEEEECCCeEEEEECCCCeEEEEE-----eCCCCcEEEEEE--cCC-EEEEEeCCCeEEEEECCCC---------
Q psy7057 130 -DTD-FVSCSNDASIRVWDSTTGKCVHTM-----YGHPNFIYSVAA--HGD-LITSGGEDQCVCVYQNKAQ--------- 190 (557)
Q Consensus 130 -~~~-lvs~s~Dg~I~vwd~~~~~~~~~~-----~~h~~~V~~l~~--~~~-~l~s~s~Dg~I~iwd~~~~--------- 190 (557)
++. +++++.|+.|++||+++++++..+ .+|...|.++++ ++. +|++++.|+.|++||++..
T Consensus 222 ~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~ 301 (357)
T 3i2n_A 222 ISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSE 301 (357)
T ss_dssp SSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTT
T ss_pred CCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCC
Confidence 655 779999999999999876644443 489999999999 344 7999999999999996531
Q ss_pred -------------ceEeeCCccEEEEEEcCCCc-EE-EEEcCCcEEEEecCCCC
Q psy7057 191 -------------NSFMIPAMSVWAVAILPNSD-IV-TGSSDGIVRVFSANPDR 229 (557)
Q Consensus 191 -------------~~~~~~~~~v~~v~~~p~g~-l~-sg~~Dg~I~iwd~~~~~ 229 (557)
..+..|...|++++|+|+++ ++ +++.|+.|++|++....
T Consensus 302 g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~~ 355 (357)
T 3i2n_A 302 GIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKLN 355 (357)
T ss_dssp SCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC--
T ss_pred CCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCCcc
Confidence 45667888999999999998 77 79999999999997643
No 95
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1e-27 Score=271.17 Aligned_cols=225 Identities=15% Similarity=0.219 Sum_probs=191.1
Q ss_pred EEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC------------------CCCCCC--CCEEEEEECCCeEE
Q psy7057 4 LSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND------------------LSPGAK--VNTLLSASWDMTAK 62 (557)
Q Consensus 4 l~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~------------------~~~~~~--~~~l~sgs~Dg~i~ 62 (557)
+...+.+|.+.|++++|+|++. |++|+.||+|++||+.. +.++++ +++|++|+.||+|+
T Consensus 1 ~~~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~ 80 (753)
T 3jro_A 1 MVVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVL 80 (753)
T ss_dssp -------CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEE
T ss_pred CeeecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEE
Confidence 3567899999999999999998 99999999999999863 455555 89999999999999
Q ss_pred EEECCCCe--EEEEEcccCCcEEEEEEcCC--C-EEEEEECCCeEEEEeCCC---cEEEEEeCCCCCEEEEEEeCC----
Q psy7057 63 LWCLESQQ--CKLTIRQHEMAVWGVIQLAN--G-IIVTGCADKTIKLHSEEG---EFLKTLTGHTDCVRGLAVLND---- 130 (557)
Q Consensus 63 iwd~~~~~--~~~~l~~h~~~V~~l~~~~~--~-~l~sgs~dg~I~vwd~~~---~~~~~l~~h~~~V~~l~~~~~---- 130 (557)
+||+.+++ ....+.+|...|.+++|+|+ + .+++|+.||.|++||... .....+.+|...|.+++|+|.
T Consensus 81 vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~ 160 (753)
T 3jro_A 81 IWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEE 160 (753)
T ss_dssp EEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---
T ss_pred EEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCccccc
Confidence 99999987 77888999999999999997 6 999999999999999533 245677889999999999993
Q ss_pred ---------C-eEEEEECCCeEEEEECCCC----eEEEEEeCCCCcEEEEEE--c---CCEEEEEeCCCeEEEEECCCC-
Q psy7057 131 ---------T-DFVSCSNDASIRVWDSTTG----KCVHTMYGHPNFIYSVAA--H---GDLITSGGEDQCVCVYQNKAQ- 190 (557)
Q Consensus 131 ---------~-~lvs~s~Dg~I~vwd~~~~----~~~~~~~~h~~~V~~l~~--~---~~~l~s~s~Dg~I~iwd~~~~- 190 (557)
+ .+++|+.||+|++||++++ .+...+.+|...|.+++| + +.+|++++.||.|++||....
T Consensus 161 ~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~ 240 (753)
T 3jro_A 161 DGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQ 240 (753)
T ss_dssp ------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSS
T ss_pred ccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCC
Confidence 4 4889999999999999876 677788899999999999 4 678999999999999996553
Q ss_pred -------ceEeeCCccEEEEEEcCCCc-EEEEEcCCcEEEEecCCC
Q psy7057 191 -------NSFMIPAMSVWAVAILPNSD-IVTGSSDGIVRVFSANPD 228 (557)
Q Consensus 191 -------~~~~~~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~ 228 (557)
.....|...|++++|+|++. +++++.||.|++|++...
T Consensus 241 ~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~~ 286 (753)
T 3jro_A 241 GPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLE 286 (753)
T ss_dssp SCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCSS
T ss_pred CcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCCC
Confidence 22234677899999999998 999999999999999853
No 96
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.95 E-value=6.2e-27 Score=242.50 Aligned_cols=258 Identities=21% Similarity=0.245 Sum_probs=181.7
Q ss_pred ccCcccEEEEEEcC-CCc-EEEEECCCcEEEEcCCC------------------CCCCCCCCEEEEEECCCeEEEEECCC
Q psy7057 9 YGHSMDVRSLSVTP-DGC-ILSASRDKSAKLWKPND------------------LSPGAKVNTLLSASWDMTAKLWCLES 68 (557)
Q Consensus 9 ~gH~~~V~~l~~sp-dg~-l~sgs~Dg~V~iWd~~~------------------~~~~~~~~~l~sgs~Dg~i~iwd~~~ 68 (557)
.+|...|++++|+| ++. |++++.||.|++||+.+ ....+++.++++++.|+.|++||+.+
T Consensus 96 ~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~ 175 (408)
T 4a11_B 96 DVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKS 175 (408)
T ss_dssp TCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSS
T ss_pred ccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCC
Confidence 36999999999999 555 89999999999999986 22233566999999999999999999
Q ss_pred CeEEEEEcccCCcEEEEEEcCCC--EEEEEECCCeEEEEeCC-C-cEEEEE---------------eCCCCCEEEEEEeC
Q psy7057 69 QQCKLTIRQHEMAVWGVIQLANG--IIVTGCADKTIKLHSEE-G-EFLKTL---------------TGHTDCVRGLAVLN 129 (557)
Q Consensus 69 ~~~~~~l~~h~~~V~~l~~~~~~--~l~sgs~dg~I~vwd~~-~-~~~~~l---------------~~h~~~V~~l~~~~ 129 (557)
++.+..+..|...|.+++|+|++ ++++|+.|+.|++||.. + .++..+ ..|...|.+++|+|
T Consensus 176 ~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 255 (408)
T 4a11_B 176 GSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTS 255 (408)
T ss_dssp SCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECT
T ss_pred cceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcC
Confidence 99999999999999999999987 69999999999999943 2 244444 57889999999999
Q ss_pred CCe-EEEEECCCeEEEEECCCCeEEEEEeCCC------CcEEEEEE-cCCEEEEEeCCCeEEEEECCCC---ceEeeCCc
Q psy7057 130 DTD-FVSCSNDASIRVWDSTTGKCVHTMYGHP------NFIYSVAA-HGDLITSGGEDQCVCVYQNKAQ---NSFMIPAM 198 (557)
Q Consensus 130 ~~~-lvs~s~Dg~I~vwd~~~~~~~~~~~~h~------~~V~~l~~-~~~~l~s~s~Dg~I~iwd~~~~---~~~~~~~~ 198 (557)
++. |++++.|+.|++||+++++....+..+. .....+.. .+..+++++.++.|++||+.+. ..+..|..
T Consensus 256 ~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~ 335 (408)
T 4a11_B 256 DGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYK 335 (408)
T ss_dssp TSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSS
T ss_pred CCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCC
Confidence 976 7799999999999999887655443321 11122222 4456778888999999997766 56677889
Q ss_pred cEEEEEEcCCCc-EEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecC
Q psy7057 199 SVWAVAILPNSD-IVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSAN 271 (557)
Q Consensus 199 ~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~ 271 (557)
.|.+++|+|++. |++++.||.|++|++.+.+.......... .....+.......+.+.|+.+++|+..
T Consensus 336 ~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~W~~~ 404 (408)
T 4a11_B 336 TVDCCVFQSNFQELYSGSRDCNILAWVPSLYEPVPDDDETTT-----KSQLNPAFEDAWSSSDEEGGTSAWSHP 404 (408)
T ss_dssp CEEEEEEETTTTEEEEEETTSCEEEEEECC--------------------------------------------
T ss_pred eEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCccCCCCceEe-----ccccccccceeecccCccCceeecCCc
Confidence 999999999998 88999999999999998765432221111 111222233334677889999999754
No 97
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.95 E-value=1.6e-27 Score=246.28 Aligned_cols=221 Identities=13% Similarity=0.136 Sum_probs=179.7
Q ss_pred EEeccCcccEEEEEEcCCCcEE-----------EEECCCcEEEEcCCC-------------------------CCCCCCC
Q psy7057 6 TALYGHSMDVRSLSVTPDGCIL-----------SASRDKSAKLWKPND-------------------------LSPGAKV 49 (557)
Q Consensus 6 ~~l~gH~~~V~~l~~spdg~l~-----------sgs~Dg~V~iWd~~~-------------------------~~~~~~~ 49 (557)
..|.+|...|.+++++++ .++ +++.|+++|+|++.. ++++|++
T Consensus 67 ~~l~~~~~~v~s~~~~~~-~~~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg 145 (365)
T 4h5i_A 67 FALEDNDDSPTAIDASKG-IILVGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREG 145 (365)
T ss_dssp EECCTTSCCCCEEEEETT-EEEEECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTS
T ss_pred EEccCCCCceEEEEeCCC-EEEEEECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCC
Confidence 357889999999987654 133 345688999998643 4578889
Q ss_pred CEEEEEE--CCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeCCCcEEEE--EeCCCCCEEE
Q psy7057 50 NTLLSAS--WDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSEEGEFLKT--LTGHTDCVRG 124 (557)
Q Consensus 50 ~~l~sgs--~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~~~~~~~--l~~h~~~V~~ 124 (557)
.++++++ .|++|+|||+++++++..+. |...|.+++|+|++ ++++++.++.+.+|..++..+.. ...|...|++
T Consensus 146 ~~la~as~~~d~~i~iwd~~~~~~~~~~~-~~~~V~~v~fspdg~~l~s~s~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 224 (365)
T 4h5i_A 146 TVAAIASSKVPAIMRIIDPSDLTEKFEIE-TRGEVKDLHFSTDGKVVAYITGSSLEVISTVTGSCIARKTDFDKNWSLSK 224 (365)
T ss_dssp SCEEEEESCSSCEEEEEETTTTEEEEEEE-CSSCCCEEEECTTSSEEEEECSSCEEEEETTTCCEEEEECCCCTTEEEEE
T ss_pred CEEEEEECCCCCEEEEeECCCCcEEEEeC-CCCceEEEEEccCCceEEeccceeEEEEEeccCcceeeeecCCCCCCEEE
Confidence 9877554 78999999999999998886 77889999999999 77777766655555566766543 4578899999
Q ss_pred EEEeCCCe-EEEEECCC----eEEEEECCCCeE----EEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCCc--
Q psy7057 125 LAVLNDTD-FVSCSNDA----SIRVWDSTTGKC----VHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQN-- 191 (557)
Q Consensus 125 l~~~~~~~-lvs~s~Dg----~I~vwd~~~~~~----~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~~-- 191 (557)
++|+|++. +++++.|+ .+++|++..... ...+.+|...|++++| ++++|++|+.|++|+|||+.+.+
T Consensus 225 v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~ 304 (365)
T 4h5i_A 225 INFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMS 304 (365)
T ss_dssp EEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEE
T ss_pred EEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEE
Confidence 99999987 66888777 688999876653 4567789999999999 78899999999999999988763
Q ss_pred -eE-eeCCccEEEEEEcCCCc-EEEEEcCCcEEEEecCCC
Q psy7057 192 -SF-MIPAMSVWAVAILPNSD-IVTGSSDGIVRVFSANPD 228 (557)
Q Consensus 192 -~~-~~~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~ 228 (557)
.+ .+|...|++|+|+|+|+ |++|+.|++||||++...
T Consensus 305 ~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 305 KIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp EEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCTT
T ss_pred EEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence 32 46889999999999999 999999999999999643
No 98
>3l3f_X Protein DOA1, DOA1/UFD3; armadillo-like repeat structure, nucleus, UBL conjugation PA protein binding; 1.90A {Saccharomyces cerevisiae}
Probab=99.95 E-value=3.3e-30 Score=258.05 Aligned_cols=67 Identities=45% Similarity=0.789 Sum_probs=58.2
Q ss_pred CCCCCCCCccceeeeeeeccCCCCCCCCCccCCCcccccccccccCCCceecccCCCCCcccccccCCChHHHHHhhhhc
Q psy7057 425 SKSKQGPTEYDFVFSVDIEEGKPPLKLPYNVSEDPWHAAQAFIHTHHLTSVDIEEGKPPLKLPYNVSEDPWHAAQAFIHT 504 (557)
Q Consensus 425 ~~~~~~g~~yd~vf~vd~~~g~p~~klp~n~~~~p~~~a~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 504 (557)
.|..|+||||||||||||+||+||||||||++||||+|||+|| ++
T Consensus 23 ~k~~~~g~~yDyvf~vdi~~g~~~~klpyN~~~np~~~A~~F~-----------------------------------~~ 67 (362)
T 3l3f_X 23 KKIEFEGKTYDYVFDVDIEDGKPPLKLPINVSDNPYTAADNFL-----------------------------------AR 67 (362)
T ss_dssp CCEEETTEEESEEEEECCSTTSCCEEEEECTTSCHHHHHHHHH-----------------------------------HH
T ss_pred CceeecCcccceEEEEEcCCCCccccCCCcCCCCHHHHHHHHH-----------------------------------HH
Confidence 4557899999999999999999999999988888887777655 55
Q ss_pred CCCChHHHHHHHHHHHhcccCC
Q psy7057 505 HHLSQMFLEQVANFIMTNSKSK 526 (557)
Q Consensus 505 ~~l~~~~~~~v~~fi~~n~~~~ 526 (557)
|+||++||||||+||++||+++
T Consensus 68 ~~l~~~y~~~i~~fi~~n~~~~ 89 (362)
T 3l3f_X 68 YELPMSYRDQVVQFILKNTNGI 89 (362)
T ss_dssp TTCCGGGHHHHHHHHHHHCC--
T ss_pred cCCCHHHHHHHHHHHHhcCCCc
Confidence 7999999999999999999854
No 99
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.95 E-value=3.8e-27 Score=248.14 Aligned_cols=215 Identities=11% Similarity=0.219 Sum_probs=184.4
Q ss_pred cCcccEEEEEEcCCCc-EEEEECCCcEEEEcCC---C--------------CC----------------CCCCCCEEEEE
Q psy7057 10 GHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPN---D--------------LS----------------PGAKVNTLLSA 55 (557)
Q Consensus 10 gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~---~--------------~~----------------~~~~~~~l~sg 55 (557)
+|.+.|++++|+|++. |++|+.||+|++||+. . +. +++++.+|++|
T Consensus 109 ~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 188 (437)
T 3gre_A 109 DCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVAL 188 (437)
T ss_dssp ECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEE
T ss_pred cCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEE
Confidence 5999999999999988 8999999999999984 1 11 33568899999
Q ss_pred ECCCeEEEEECCCCeEEEEEcc--cCCcEEEEEEcCCC-EEEEEECCCeEEEEe-CCCcEEEEEe-CCCCCEEEEEEeC-
Q psy7057 56 SWDMTAKLWCLESQQCKLTIRQ--HEMAVWGVIQLANG-IIVTGCADKTIKLHS-EEGEFLKTLT-GHTDCVRGLAVLN- 129 (557)
Q Consensus 56 s~Dg~i~iwd~~~~~~~~~l~~--h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd-~~~~~~~~l~-~h~~~V~~l~~~~- 129 (557)
+.|++|++||+.+++++..+.+ |...|++++|+|++ .|++|+.|++|++|| ..+.++..+. .|...|.+++++|
T Consensus 189 ~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~ 268 (437)
T 3gre_A 189 TNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQF 268 (437)
T ss_dssp ETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTT
T ss_pred eCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccc
Confidence 9999999999999999999988 89999999999998 999999999999999 5667778776 7888999997765
Q ss_pred ---CCe-EEEEECCCeEEEEECCCCeEEEEEeCC--------------------------CCcEEEEEE-cCCEEEEEeC
Q psy7057 130 ---DTD-FVSCSNDASIRVWDSTTGKCVHTMYGH--------------------------PNFIYSVAA-HGDLITSGGE 178 (557)
Q Consensus 130 ---~~~-lvs~s~Dg~I~vwd~~~~~~~~~~~~h--------------------------~~~V~~l~~-~~~~l~s~s~ 178 (557)
++. +++++.|++|++||+++++++..+.+| ...|+++++ ++.+|++++.
T Consensus 269 ~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~ 348 (437)
T 3gre_A 269 YGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVSNDKILLTDEA 348 (437)
T ss_dssp TCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEETTEEEEEEGG
T ss_pred cCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEECCceEEEecCC
Confidence 454 779999999999999999999888754 445778888 5568999999
Q ss_pred CCeEEEEECCCC---ceEee-------------------------------------CCccEEEEEEcCC--Cc-EEEEE
Q psy7057 179 DQCVCVYQNKAQ---NSFMI-------------------------------------PAMSVWAVAILPN--SD-IVTGS 215 (557)
Q Consensus 179 Dg~I~iwd~~~~---~~~~~-------------------------------------~~~~v~~v~~~p~--g~-l~sg~ 215 (557)
|+.|++||+.+. ..+.. |...|.+++++++ +. |++|+
T Consensus 349 d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~ 428 (437)
T 3gre_A 349 TSSIVMFSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPLLVACD 428 (437)
T ss_dssp GTEEEEEETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSSSEEEEEEE
T ss_pred CCeEEEEECCCcccceEEecccccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCCceEEEEEc
Confidence 999999997655 33333 7889999999998 55 88999
Q ss_pred cCCcEEEEe
Q psy7057 216 SDGIVRVFS 224 (557)
Q Consensus 216 ~Dg~I~iwd 224 (557)
.||.|+||+
T Consensus 429 ~dG~I~iw~ 437 (437)
T 3gre_A 429 NSGLIGIFQ 437 (437)
T ss_dssp TTSCEEEEC
T ss_pred CCceEEEeC
Confidence 999999995
No 100
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.95 E-value=6.6e-27 Score=246.93 Aligned_cols=220 Identities=26% Similarity=0.386 Sum_probs=189.0
Q ss_pred EEEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC----------------CCCCCCCCEEEEEECCCeEEEEE
Q psy7057 3 KLSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND----------------LSPGAKVNTLLSASWDMTAKLWC 65 (557)
Q Consensus 3 kl~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~Dg~i~iwd 65 (557)
+....+.+|.+.|++++| ++. |++|+.||+|++||+.+ +.+ .++.+++|+.|++|++||
T Consensus 164 ~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~dg~i~vwd 239 (435)
T 1p22_A 164 ECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRF--NNGMMVTCSKDRSIAVWD 239 (435)
T ss_dssp CEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEEC--CTTEEEEEETTSCEEEEE
T ss_pred eEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEEEEE--cCCEEEEeeCCCcEEEEe
Confidence 467789999999999999 555 99999999999999876 333 367999999999999999
Q ss_pred CCCCeEE---EEEcccCCcEEEEEEcCCCEEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeCCCeEEEEECCCe
Q psy7057 66 LESQQCK---LTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDTDFVSCSNDAS 141 (557)
Q Consensus 66 ~~~~~~~---~~l~~h~~~V~~l~~~~~~~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~~~~lvs~s~Dg~ 141 (557)
+.+++.. ..+.+|...|.++++ ....+++|+.|+.|++|| .+++++..+.+|...|.++.+. ...+++|+.|++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~-~~~l~~g~~dg~ 317 (435)
T 1p22_A 240 MASPTDITLRRVLVGHRAAVNVVDF-DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR-DRLVVSGSSDNT 317 (435)
T ss_dssp CSSSSCCEEEEEECCCSSCEEEEEE-ETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEE-TTEEEEEETTSC
T ss_pred CCCCCCceeeeEecCCCCcEEEEEe-CCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEeC-CCEEEEEeCCCe
Confidence 9887644 678899999999999 344999999999999999 5778899999999999999995 356889999999
Q ss_pred EEEEECCCCeEEEEEeCCCCcEEEEEEcCCEEEEEeCCCeEEEEECCC-----------C-ceEeeCCccEEEEEEcCCC
Q psy7057 142 IRVWDSTTGKCVHTMYGHPNFIYSVAAHGDLITSGGEDQCVCVYQNKA-----------Q-NSFMIPAMSVWAVAILPNS 209 (557)
Q Consensus 142 I~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~l~s~s~Dg~I~iwd~~~-----------~-~~~~~~~~~v~~v~~~p~g 209 (557)
|++||+++++++.++.+|...|.++++++.+|++|+.||.|++||+.. . ..+..|...|.+++| ++
T Consensus 318 i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~ 395 (435)
T 1p22_A 318 IRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DE 395 (435)
T ss_dssp EEEEETTTCCEEEEECCCSSCEEEEECCSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE--CS
T ss_pred EEEEECCCCCEEEEEeCCcCcEEEEEecCCEEEEEeCCCcEEEEECCCCCCccccccchheeeccCCCCCeEEEEe--CC
Confidence 999999999999999999999999999999999999999999999432 2 456778889999999 45
Q ss_pred c-EEEEEcCCcEEEEecCCCCc
Q psy7057 210 D-IVTGSSDGIVRVFSANPDRQ 230 (557)
Q Consensus 210 ~-l~sg~~Dg~I~iwd~~~~~~ 230 (557)
. +++++.||+|++|++.....
T Consensus 396 ~~l~s~s~Dg~i~iwd~~~~~~ 417 (435)
T 1p22_A 396 FQIVSSSHDDTILIWDFLNDPA 417 (435)
T ss_dssp SCEEECCSSSEEEEEC------
T ss_pred CEEEEEeCCCEEEEEECCCCCC
Confidence 5 99999999999999987644
No 101
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.95 E-value=3.9e-27 Score=248.59 Aligned_cols=252 Identities=17% Similarity=0.260 Sum_probs=200.8
Q ss_pred EEeccCcccEEEEEEcCC-Cc-EEEEECCCcEEEEcCCCCCCCCCCCEEEEEECCCeEEEEECCCCeEEEEEcccCCcEE
Q psy7057 6 TALYGHSMDVRSLSVTPD-GC-ILSASRDKSAKLWKPNDLSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVW 83 (557)
Q Consensus 6 ~~l~gH~~~V~~l~~spd-g~-l~sgs~Dg~V~iWd~~~~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~ 83 (557)
..+.+|.+.|++++|+|+ +. |++++.||.|++|++......+. . .....++..+.+|...|+
T Consensus 122 ~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~--------~--------~~~~~~~~~~~~h~~~v~ 185 (430)
T 2xyi_A 122 EIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPE--------P--------SGECQPDLRLRGHQKEGY 185 (430)
T ss_dssp EEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCC--------T--------TCCCCCSEEEECCSSCCC
T ss_pred EEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccC--------c--------cccCCCcEEecCCCCCeE
Confidence 445679999999999997 44 66777788888887754211110 0 012456677889999999
Q ss_pred EEEEcCCC--EEEEEECCCeEEEEeCCC-----cE---EEEEeCCCCCEEEEEEeCC-C-eEEEEECCCeEEEEECCCC-
Q psy7057 84 GVIQLANG--IIVTGCADKTIKLHSEEG-----EF---LKTLTGHTDCVRGLAVLND-T-DFVSCSNDASIRVWDSTTG- 150 (557)
Q Consensus 84 ~l~~~~~~--~l~sgs~dg~I~vwd~~~-----~~---~~~l~~h~~~V~~l~~~~~-~-~lvs~s~Dg~I~vwd~~~~- 150 (557)
+++|+|++ .|++|+.||.|++|+... .. ...+.+|...|.+++|+|. + .|++++.|+.|++||++++
T Consensus 186 ~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~ 265 (430)
T 2xyi_A 186 GLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNN 265 (430)
T ss_dssp CEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSC
T ss_pred EEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCC
Confidence 99999976 899999999999999543 11 4567789999999999994 3 4779999999999999987
Q ss_pred --eEEEEEeCCCCcEEEEEE--cCC-EEEEEeCCCeEEEEECCCC----ceEeeCCccEEEEEEcCCCc--EEEEEcCCc
Q psy7057 151 --KCVHTMYGHPNFIYSVAA--HGD-LITSGGEDQCVCVYQNKAQ----NSFMIPAMSVWAVAILPNSD--IVTGSSDGI 219 (557)
Q Consensus 151 --~~~~~~~~h~~~V~~l~~--~~~-~l~s~s~Dg~I~iwd~~~~----~~~~~~~~~v~~v~~~p~g~--l~sg~~Dg~ 219 (557)
+++..+..|...|++++| ++. +|++|+.|+.|++||++.. ..+..|...|.+++|+|++. |++++.|+.
T Consensus 266 ~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~ 345 (430)
T 2xyi_A 266 TSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRR 345 (430)
T ss_dssp SSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSC
T ss_pred CCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCc
Confidence 577888899999999999 344 7999999999999997753 56777899999999999986 889999999
Q ss_pred EEEEecCCCCc------------chhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecCCC
Q psy7057 220 VRVFSANPDRQ------------AEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPD 273 (557)
Q Consensus 220 I~iwd~~~~~~------------~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~~ 273 (557)
|+||++..... ........|...+..+.+.+.....+++++.||.|+||++...
T Consensus 346 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 346 LHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAEN 411 (430)
T ss_dssp CEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHH
T ss_pred EEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEcccc
Confidence 99999976321 1122334566779999998888867899999999999998854
No 102
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.95 E-value=4.7e-26 Score=258.55 Aligned_cols=226 Identities=24% Similarity=0.317 Sum_probs=200.3
Q ss_pred EEEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC----------------CCCCCCCCEEEEEECCCeEEEEE
Q psy7057 3 KLSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND----------------LSPGAKVNTLLSASWDMTAKLWC 65 (557)
Q Consensus 3 kl~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~Dg~i~iwd 65 (557)
+..+.+.+|.+.|++++|+|++. |++|+.||.|++||+.+ +.+++++.+|++++.|++|++|+
T Consensus 46 ~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~ 125 (814)
T 3mkq_A 46 VEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWN 125 (814)
T ss_dssp EEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEE
T ss_pred ceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEE
Confidence 56788999999999999999998 89999999999999876 67888999999999999999999
Q ss_pred CCCC-eEEEEEcccCCcEEEEEEcC-CC-EEEEEECCCeEEEEeC-CCcEEEEEeCCC-CCEEEEEEeC--CCe-EEEEE
Q psy7057 66 LESQ-QCKLTIRQHEMAVWGVIQLA-NG-IIVTGCADKTIKLHSE-EGEFLKTLTGHT-DCVRGLAVLN--DTD-FVSCS 137 (557)
Q Consensus 66 ~~~~-~~~~~l~~h~~~V~~l~~~~-~~-~l~sgs~dg~I~vwd~-~~~~~~~l~~h~-~~V~~l~~~~--~~~-lvs~s 137 (557)
+.++ .....+.+|...|.+++|+| ++ .+++++.|++|++||. .+.....+..+. ..+.+++|+| ++. +++++
T Consensus 126 ~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~ 205 (814)
T 3mkq_A 126 WENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITAS 205 (814)
T ss_dssp GGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEEC
T ss_pred CCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEe
Confidence 9887 77788999999999999999 66 9999999999999994 455566665544 8899999998 665 77999
Q ss_pred CCCeEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC---ceEeeCCccEEEEEEcCCCc--
Q psy7057 138 NDASIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ---NSFMIPAMSVWAVAILPNSD-- 210 (557)
Q Consensus 138 ~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~---~~~~~~~~~v~~v~~~p~g~-- 210 (557)
.|+.|++||+++++++.++.+|...|.++++ ++.+|++++.||.|++||..+. ..+..+...+++++|+|++.
T Consensus 206 ~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 285 (814)
T 3mkq_A 206 DDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKN 285 (814)
T ss_dssp TTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCSEEEEECCSSSSEEEEEECTTCGGG
T ss_pred CCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCcEEEEEEccCCCce
Confidence 9999999999999999999999999999999 6679999999999999998765 55667778999999999997
Q ss_pred EEEEEcCCcEEEEecCCC
Q psy7057 211 IVTGSSDGIVRVFSANPD 228 (557)
Q Consensus 211 l~sg~~Dg~I~iwd~~~~ 228 (557)
+++++.++.+.+|++...
T Consensus 286 ~~~~~~~~~~~~~~~~~~ 303 (814)
T 3mkq_A 286 YIASGFDNGFTVLSLGND 303 (814)
T ss_dssp EEEEEETTEEEEEECSCC
T ss_pred EEEEEeCCCEEEEEcCCC
Confidence 577778888999987654
No 103
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.95 E-value=1.4e-26 Score=233.37 Aligned_cols=231 Identities=18% Similarity=0.194 Sum_probs=189.1
Q ss_pred CCCCCCCCEEEEEECCCeEEEEECCCC----eEEEEEcccCCcEEEEEEcC--CC-EEEEEECCCeEEEEeCCC------
Q psy7057 43 LSPGAKVNTLLSASWDMTAKLWCLESQ----QCKLTIRQHEMAVWGVIQLA--NG-IIVTGCADKTIKLHSEEG------ 109 (557)
Q Consensus 43 ~~~~~~~~~l~sgs~Dg~i~iwd~~~~----~~~~~l~~h~~~V~~l~~~~--~~-~l~sgs~dg~I~vwd~~~------ 109 (557)
+.+++++.+|++|+.|++|++|++.++ +....+.+|...|.+++|+| ++ .|++|+.|+.|++||...
T Consensus 17 ~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~ 96 (351)
T 3f3f_A 17 VVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECS 96 (351)
T ss_dssp EEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTS
T ss_pred EEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCccccc
Confidence 456678999999999999999999876 57778899999999999999 35 999999999999999433
Q ss_pred ----cEEEEEeCCCCCEEEEEEeCC--Ce-EEEEECCCeEEEEECCCCeEEEEEe-------------CCCCcEEEEEE-
Q psy7057 110 ----EFLKTLTGHTDCVRGLAVLND--TD-FVSCSNDASIRVWDSTTGKCVHTMY-------------GHPNFIYSVAA- 168 (557)
Q Consensus 110 ----~~~~~l~~h~~~V~~l~~~~~--~~-lvs~s~Dg~I~vwd~~~~~~~~~~~-------------~h~~~V~~l~~- 168 (557)
.++..+.+|...|.+++|+|+ +. +++++.|+.|++||+++++.+..+. .|...+.++++
T Consensus 97 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (351)
T 3f3f_A 97 GRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWC 176 (351)
T ss_dssp SCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEEC
T ss_pred ccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEec
Confidence 567888899999999999998 66 7799999999999998876433322 57788999999
Q ss_pred -c---CCEEEEEeCCCeEEEEECCCC-----ceEeeCCccEEEEEEcCCC----c-EEEEEcCCcEEEEecCCCCcc---
Q psy7057 169 -H---GDLITSGGEDQCVCVYQNKAQ-----NSFMIPAMSVWAVAILPNS----D-IVTGSSDGIVRVFSANPDRQA--- 231 (557)
Q Consensus 169 -~---~~~l~s~s~Dg~I~iwd~~~~-----~~~~~~~~~v~~v~~~p~g----~-l~sg~~Dg~I~iwd~~~~~~~--- 231 (557)
+ +..+++++.++.+.+|+.... ..+..|...|++++|+|++ . |++++.||.|++|++......
T Consensus 177 p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 256 (351)
T 3f3f_A 177 PSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLAS 256 (351)
T ss_dssp CCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC-----
T ss_pred cCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCcccc
Confidence 3 679999999999988886544 3445688899999999998 6 899999999999999764211
Q ss_pred -----------------------------------------hhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEec
Q psy7057 232 -----------------------------------------EDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSA 270 (557)
Q Consensus 232 -----------------------------------------~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~ 270 (557)
.......|...+..+.+.+... .+++++.||.|+||++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~-~l~s~~~dg~v~iw~~ 335 (351)
T 3f3f_A 257 EESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGT-ILSSAGDDGKVRLWKA 335 (351)
T ss_dssp ----------------------------------CCSEEEEEEEEECTTSSCEEEEEECSSSC-CEEEEETTSCEEEEEE
T ss_pred CCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCCC-EEEEecCCCcEEEEec
Confidence 1112234667788888877654 6899999999999999
Q ss_pred CCCh
Q psy7057 271 NPDR 274 (557)
Q Consensus 271 ~~~~ 274 (557)
..++
T Consensus 336 ~~~~ 339 (351)
T 3f3f_A 336 TYSN 339 (351)
T ss_dssp CTTS
T ss_pred CcCc
Confidence 8654
No 104
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.95 E-value=1.7e-25 Score=223.97 Aligned_cols=224 Identities=17% Similarity=0.243 Sum_probs=186.3
Q ss_pred EEEEe--ccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC--------------CCCCCCCCEEEEEECCCeEEEEEC
Q psy7057 4 LSTAL--YGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND--------------LSPGAKVNTLLSASWDMTAKLWCL 66 (557)
Q Consensus 4 l~~~l--~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~--------------~~~~~~~~~l~sgs~Dg~i~iwd~ 66 (557)
+.+.+ .+|...|++++|+|+++ |++|+.||+|++|++.+ ......+..+++++.++.+++|+.
T Consensus 57 ~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~ 136 (318)
T 4ggc_A 57 ILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDV 136 (318)
T ss_dssp EEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEETTEEEEEETTSEEEEEET
T ss_pred EEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEeecCCCEEEEEecCCceEeeec
Confidence 44444 57888999999999998 89999999999999987 233445789999999999999998
Q ss_pred CCC-eEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeCC-C----cEEEEEeCCCCCEEEEEEeCCCe-E---EE
Q psy7057 67 ESQ-QCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSEE-G----EFLKTLTGHTDCVRGLAVLNDTD-F---VS 135 (557)
Q Consensus 67 ~~~-~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~-~----~~~~~l~~h~~~V~~l~~~~~~~-l---vs 135 (557)
... ..+..+.+|...+.++.+.+++ .+++++.|++|++||.. + ........|...|.++.++|.+. + ++
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 216 (318)
T 4ggc_A 137 RVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGG 216 (318)
T ss_dssp TSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEE
T ss_pred CCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEe
Confidence 775 5677889999999999999988 99999999999999943 2 23456677889999999998743 2 36
Q ss_pred EECCCeEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEe--CCCeEEEEECCCC---ceEeeCCccEEEEEEcCC
Q psy7057 136 CSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGG--EDQCVCVYQNKAQ---NSFMIPAMSVWAVAILPN 208 (557)
Q Consensus 136 ~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s--~Dg~I~iwd~~~~---~~~~~~~~~v~~v~~~p~ 208 (557)
++.+++|++||.+......... +...+..+.+ .+..+++++ .|+.|++||+.+. ..+.+|...|++++|+|+
T Consensus 217 ~~~~~~i~lwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spd 295 (318)
T 4ggc_A 217 GTSDRHIRIWNVCSGACLSAVD-AHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPD 295 (318)
T ss_dssp CTTTCEEEEEETTTCCEEEEEE-CSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTT
T ss_pred cCCCCEEEEEeccccccccccc-ceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCC
Confidence 6788999999998888776654 6677888888 556666544 7999999998766 667789999999999999
Q ss_pred Cc-EEEEEcCCcEEEEecCCC
Q psy7057 209 SD-IVTGSSDGIVRVFSANPD 228 (557)
Q Consensus 209 g~-l~sg~~Dg~I~iwd~~~~ 228 (557)
+. |++|+.||+|+|||+...
T Consensus 296 g~~l~S~s~D~~v~iWd~~~~ 316 (318)
T 4ggc_A 296 GATVASAAADETLRLWRCFEL 316 (318)
T ss_dssp SSCEEEEETTTEEEEECCSCC
T ss_pred CCEEEEEecCCeEEEEECCCC
Confidence 98 999999999999998654
No 105
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.95 E-value=9.3e-28 Score=253.67 Aligned_cols=225 Identities=16% Similarity=0.175 Sum_probs=175.9
Q ss_pred EEEeccCcccEEEEEEcC-CCc-EEEEECCCcEEEEcCCC------------------CCCCCCCCEEEEEECCCeEEEE
Q psy7057 5 STALYGHSMDVRSLSVTP-DGC-ILSASRDKSAKLWKPND------------------LSPGAKVNTLLSASWDMTAKLW 64 (557)
Q Consensus 5 ~~~l~gH~~~V~~l~~sp-dg~-l~sgs~Dg~V~iWd~~~------------------~~~~~~~~~l~sgs~Dg~i~iw 64 (557)
...+.+|.+.|++|+|+| ++. |+|||.||+|++||+.. +.+++++.+|++|+.||+|++|
T Consensus 157 ~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~w 236 (435)
T 4e54_B 157 FIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILL 236 (435)
T ss_dssp EECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEE
T ss_pred EEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeee
Confidence 345678999999999998 565 89999999999999875 4567789999999999999999
Q ss_pred ECCCCeEEEEEcccCCcEEEEEEcCCC--EEEEEECCCeEEEEeCC-CcE---EEEEeCCCCCEEEEEEeCCCe-EEEEE
Q psy7057 65 CLESQQCKLTIRQHEMAVWGVIQLANG--IIVTGCADKTIKLHSEE-GEF---LKTLTGHTDCVRGLAVLNDTD-FVSCS 137 (557)
Q Consensus 65 d~~~~~~~~~l~~h~~~V~~l~~~~~~--~l~sgs~dg~I~vwd~~-~~~---~~~l~~h~~~V~~l~~~~~~~-lvs~s 137 (557)
|++. +.+.++.+|...|.+++|+|++ ++++|+.|++|++||.. ... +....+|...|++++|+|++. |++++
T Consensus 237 d~~~-~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~ 315 (435)
T 4e54_B 237 NMDG-KELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTD 315 (435)
T ss_dssp ESSS-CBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEE
T ss_pred ccCc-ceeEEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEc
Confidence 9864 5677889999999999999976 78899999999999943 222 233467999999999999976 77999
Q ss_pred CCCeEEEEECCCCeEEEEEeCCCCc------EEEEEE--cCCEEEEEe------------CCCeEEEEECCCCce---E-
Q psy7057 138 NDASIRVWDSTTGKCVHTMYGHPNF------IYSVAA--HGDLITSGG------------EDQCVCVYQNKAQNS---F- 193 (557)
Q Consensus 138 ~Dg~I~vwd~~~~~~~~~~~~h~~~------V~~l~~--~~~~l~s~s------------~Dg~I~iwd~~~~~~---~- 193 (557)
.|++|++||++++++...+..|... +....+ ++..+++++ .++.|++||..+... +
T Consensus 316 ~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~ 395 (435)
T 4e54_B 316 QKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLY 395 (435)
T ss_dssp SSSCEEEEESSSSSSEEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEEC
T ss_pred CCCEEEEEECCCCccceEEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEe
Confidence 9999999999999888887766431 222333 334444443 346899999876632 2
Q ss_pred eeCCccEEEE-EEcCCCcEEEEEcCCcEEEEecCCCCc
Q psy7057 194 MIPAMSVWAV-AILPNSDIVTGSSDGIVRVFSANPDRQ 230 (557)
Q Consensus 194 ~~~~~~v~~v-~~~p~g~l~sg~~Dg~I~iwd~~~~~~ 230 (557)
..|...|.++ +|+|+|.+++++.|+.|+||+++.++.
T Consensus 396 ~~~~~~v~s~~~fspdg~~lasg~d~~i~iW~~~~gk~ 433 (435)
T 4e54_B 396 DPESSGISSLNEFNPMGDTLASAMGYHILIWSQQEART 433 (435)
T ss_dssp CSSCCCCCCEEEECTTSSCEEEECSSEEEECCCC----
T ss_pred CCCCCcEEEEEEECCCCCEEEEEcCCcEEEEECCcCee
Confidence 3466778887 699999955556699999999987654
No 106
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.95 E-value=5e-27 Score=253.72 Aligned_cols=219 Identities=12% Similarity=0.088 Sum_probs=175.6
Q ss_pred EEEEEECCCeEEEEECCCCeE----EEEEcccCCcEEEEEEcCC-------CEEEEEECCCeEEEEeCCCc---------
Q psy7057 51 TLLSASWDMTAKLWCLESQQC----KLTIRQHEMAVWGVIQLAN-------GIIVTGCADKTIKLHSEEGE--------- 110 (557)
Q Consensus 51 ~l~sgs~Dg~i~iwd~~~~~~----~~~l~~h~~~V~~l~~~~~-------~~l~sgs~dg~I~vwd~~~~--------- 110 (557)
.+++++.|++|+||++.+++. ..++.+|...|++++|+|+ ++|++++.|++|++||....
T Consensus 175 ~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~ 254 (524)
T 2j04_B 175 MFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKM 254 (524)
T ss_dssp -------CEEEEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEEC
T ss_pred hhccCCCCceEEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCcccccccee
Confidence 344566889999999987653 2456778899999999996 39999999999999995322
Q ss_pred ---EEEEEeCCCCCEEEEEEeCCCeEEEEECCCeEEEEECCCC-eEEEEEeCCCCcEEEEE--E--cC-CEEEEEeCCCe
Q psy7057 111 ---FLKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTG-KCVHTMYGHPNFIYSVA--A--HG-DLITSGGEDQC 181 (557)
Q Consensus 111 ---~~~~l~~h~~~V~~l~~~~~~~lvs~s~Dg~I~vwd~~~~-~~~~~~~~h~~~V~~l~--~--~~-~~l~s~s~Dg~ 181 (557)
+...+.+|...|++++|++++.|++|+.||+|++||++++ .+...+.+|...|++|+ + ++ .+|+||+.|++
T Consensus 255 ~~~p~~~l~~h~~~v~sv~~s~~~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~t 334 (524)
T 2j04_B 255 CEKPSLTLSLADSLITTFDFLSPTTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGY 334 (524)
T ss_dssp CCSCSEEECCTTTCEEEEEESSSSEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSE
T ss_pred ecCceEEEEcCCCCEEEEEecCCCeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCe
Confidence 2347789999999999998888999999999999999876 45567889999999994 4 45 68999999999
Q ss_pred EEEEECCCC---ceEeeCCc--cEEEEEEcCCCc-EEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCcee
Q psy7057 182 VCVYQNKAQ---NSFMIPAM--SVWAVAILPNSD-IVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIG 255 (557)
Q Consensus 182 I~iwd~~~~---~~~~~~~~--~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~ 255 (557)
|++||+++. ..+..|.. .|++++|+|++. +++++.|++|++||++...... ....|...|..+.+.+... .
T Consensus 335 vklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~--~l~gH~~~V~sva~Sp~g~-~ 411 (524)
T 2j04_B 335 FYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVH--PLVSRETTITAIGVSRLHP-M 411 (524)
T ss_dssp EEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCE--EEEECSSCEEEEECCSSCC-B
T ss_pred EEEEECCCCCcccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccce--eeecCCCceEEEEeCCCCC-e
Confidence 999998765 35555543 588999999987 8899999999999998765432 2346888999999987655 5
Q ss_pred EEEEeCCCcEEEEecCC
Q psy7057 256 GVKVSDDGIVRVFSANP 272 (557)
Q Consensus 256 ~vs~s~DG~IrvW~~~~ 272 (557)
+++||.||+|++|++..
T Consensus 412 l~Sgs~Dgtv~lwd~~~ 428 (524)
T 2j04_B 412 VLAGSADGSLIITNAAR 428 (524)
T ss_dssp CEEEETTTEEECCBSCS
T ss_pred EEEEECCCEEEEEechH
Confidence 89999999999999764
No 107
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.95 E-value=6.5e-26 Score=234.45 Aligned_cols=228 Identities=14% Similarity=0.128 Sum_probs=183.0
Q ss_pred CCCCCCC-CEEEEEECCCeEEEEECCCCeEEEEEc--ccCCcEEEEEEcC-CC-EEEEEECCCeEEEEeCCCcEEEEEeC
Q psy7057 43 LSPGAKV-NTLLSASWDMTAKLWCLESQQCKLTIR--QHEMAVWGVIQLA-NG-IIVTGCADKTIKLHSEEGEFLKTLTG 117 (557)
Q Consensus 43 ~~~~~~~-~~l~sgs~Dg~i~iwd~~~~~~~~~l~--~h~~~V~~l~~~~-~~-~l~sgs~dg~I~vwd~~~~~~~~l~~ 117 (557)
+.+++++ .+|++|+.|++|++||+.+++....+. +|...|.+++|+| ++ .|++++.|+.|++||..+..+..+..
T Consensus 79 ~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~ 158 (383)
T 3ei3_B 79 LEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSGSVIQVFAK 158 (383)
T ss_dssp EEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTSCEEEEEEC
T ss_pred EEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCCCceEEEec
Confidence 4566777 899999999999999999887777665 6999999999999 54 99999999999999988888877765
Q ss_pred CC---CCEEEEEEeCCCe-EEEEECCCeEEEEECCCCeEEEEEeCCCCcEEEEEE--cCC-EEEEEeCCCeEEEEECCC-
Q psy7057 118 HT---DCVRGLAVLNDTD-FVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGD-LITSGGEDQCVCVYQNKA- 189 (557)
Q Consensus 118 h~---~~V~~l~~~~~~~-lvs~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~-~l~s~s~Dg~I~iwd~~~- 189 (557)
|. ..|.+++|+|++. |++++.|+.|++||+ +++++..+.+|...|.+++| ++. +|++++.|+.|++||++.
T Consensus 159 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~ 237 (383)
T 3ei3_B 159 TDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNI 237 (383)
T ss_dssp CCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGC
T ss_pred cCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCC
Confidence 54 7899999999976 779999999999998 58889999999999999999 455 899999999999999764
Q ss_pred ---C--ceEeeCCccEEEEEEcC-CCc-EEEEEcCCcEEEEecCCCCcchhHHHh-----cccce----------eEEEe
Q psy7057 190 ---Q--NSFMIPAMSVWAVAILP-NSD-IVTGSSDGIVRVFSANPDRQAEDAVQA-----QYAEE----------VKKLK 247 (557)
Q Consensus 190 ---~--~~~~~~~~~v~~v~~~p-~g~-l~sg~~Dg~I~iwd~~~~~~~~~~~~~-----~~~~~----------v~~l~ 247 (557)
. .....|...|.+++|+| ++. |++++.|+.|++||+.+.......... .+... +..+.
T Consensus 238 ~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 317 (383)
T 3ei3_B 238 KDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAG 317 (383)
T ss_dssp CSTTCEEEEEECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEE
T ss_pred CcccceEEEecCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccccccccccccccccceEEeccCCCCceEEE
Confidence 2 33346888999999999 888 889999999999999876543221110 11111 22233
Q ss_pred ccCCCceeEEEEeCCCcEEEEecCCCh
Q psy7057 248 SANEQEIGGVKVSDDGIVRVFSANPDR 274 (557)
Q Consensus 248 ~~~~~~~~~vs~s~DG~IrvW~~~~~~ 274 (557)
+.++... +++.||.|+||++..++
T Consensus 318 ~s~dg~~---s~s~d~~i~iwd~~~~~ 341 (383)
T 3ei3_B 318 RYPDDQL---LLNDKRTIDIYDANSGG 341 (383)
T ss_dssp CBCCTTT---CTTCCCCEEEEETTTCC
T ss_pred ecCCccc---ccCCCCeEEEEecCCCc
Confidence 3333322 66789999999987654
No 108
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.95 E-value=3.8e-26 Score=242.29 Aligned_cols=258 Identities=14% Similarity=0.166 Sum_probs=204.3
Q ss_pred ccEEEEEEcCCCcEEEEECCCcEEEEcCCC--------------------------------------------------
Q psy7057 13 MDVRSLSVTPDGCILSASRDKSAKLWKPND-------------------------------------------------- 42 (557)
Q Consensus 13 ~~V~~l~~spdg~l~sgs~Dg~V~iWd~~~-------------------------------------------------- 42 (557)
.++.+++|+|+|++++++.++.|++||+.+
T Consensus 5 ~p~~~v~~s~dg~~l~~~~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (450)
T 2vdu_B 5 HPLQNLLTSRDGSLVFAIIKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDSI 84 (450)
T ss_dssp CCCCEEEECSSSSEEEEEETTEEEEEEEETTTEEEEEEEEECCC------------------------------------
T ss_pred ccEEEEEecCCCCEEEEEeCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCccc
Confidence 588999999999977777889999998532
Q ss_pred -----------------------CCCCCCCCEE-EEEECCCeEEEEECC--CCeEEEEEc--ccCCcEEEEEEcCCC-EE
Q psy7057 43 -----------------------LSPGAKVNTL-LSASWDMTAKLWCLE--SQQCKLTIR--QHEMAVWGVIQLANG-II 93 (557)
Q Consensus 43 -----------------------~~~~~~~~~l-~sgs~Dg~i~iwd~~--~~~~~~~l~--~h~~~V~~l~~~~~~-~l 93 (557)
+.+++++.+| ++|+.|++|++|++. +++++..+. .|...|++++|+|++ .|
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l 164 (450)
T 2vdu_B 85 KRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTV 164 (450)
T ss_dssp ---------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEE
T ss_pred cccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEE
Confidence 3456788886 889999999999999 888887776 567899999999998 99
Q ss_pred EEEECCCeEEEEeC-CCc----EEEEEeCCCCCEEEEEEeCC---Ce-EEEEECCCeEEEEECCCCeEEEE-EeCCCCcE
Q psy7057 94 VTGCADKTIKLHSE-EGE----FLKTLTGHTDCVRGLAVLND---TD-FVSCSNDASIRVWDSTTGKCVHT-MYGHPNFI 163 (557)
Q Consensus 94 ~sgs~dg~I~vwd~-~~~----~~~~l~~h~~~V~~l~~~~~---~~-lvs~s~Dg~I~vwd~~~~~~~~~-~~~h~~~V 163 (557)
++|+.++.+++|+. ++. +...+.+|...|++++|+|+ +. |++++.|++|++||+++++++.. +.+|...|
T Consensus 165 ~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v 244 (450)
T 2vdu_B 165 IIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFV 244 (450)
T ss_dssp EEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCE
T ss_pred EEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCce
Confidence 99999999999994 333 23367889999999999998 86 77999999999999999998887 55899999
Q ss_pred EEEEE-cCCEEEEEeCCCeEEEEECCCCc---eEee-------------------------CCccEEEEEEcCCCc-EEE
Q psy7057 164 YSVAA-HGDLITSGGEDQCVCVYQNKAQN---SFMI-------------------------PAMSVWAVAILPNSD-IVT 213 (557)
Q Consensus 164 ~~l~~-~~~~l~s~s~Dg~I~iwd~~~~~---~~~~-------------------------~~~~v~~v~~~p~g~-l~s 213 (557)
.+++| ++.+|++++.|++|++||+.+.+ .+.. ....|.+++++|+++ +++
T Consensus 245 ~~~~~sd~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~ 324 (450)
T 2vdu_B 245 SSICCGKDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAF 324 (450)
T ss_dssp EEEEECSTTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEE
T ss_pred EEEEECCCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEE
Confidence 99999 68899999999999999987652 3321 234689999999998 777
Q ss_pred EE-cCCcEEEEec--CCCCc-chhHHHhcccceeEEEeccCCCceeEEEE-eC------CCcEEEEecCCC
Q psy7057 214 GS-SDGIVRVFSA--NPDRQ-AEDAVQAQYAEEVKKLKSANEQEIGGVKV-SD------DGIVRVFSANPD 273 (557)
Q Consensus 214 g~-~Dg~I~iwd~--~~~~~-~~~~~~~~~~~~v~~l~~~~~~~~~~vs~-s~------DG~IrvW~~~~~ 273 (557)
++ .|+.|++|++ ..... ........+ ..+..+.+.+ +.. +++. +. +..|++|.++.+
T Consensus 325 ~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~-~~v~~~~~~~-~~~-~v~~~~~~~~~~~~~~i~v~~~~~~ 392 (450)
T 2vdu_B 325 FVEATKCIIILEMSEKQKGDLALKQIITFP-YNVISLSAHN-DEF-QVTLDNKESSGVQKNFAKFIEYNLN 392 (450)
T ss_dssp EETTCSEEEEEEECSSSTTCEEEEEEEECS-SCEEEEEEET-TEE-EEEECCTTCCSSCCCSEEEEEEETT
T ss_pred EECCCCeEEEEEeccCCCCceeeccEeccC-CceEEEEecC-CcE-EEEEecccCCCCCCcceEEEEEEcC
Confidence 77 8999999999 43311 111122223 6678888877 333 3443 32 567999987654
No 109
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.95 E-value=4.2e-26 Score=232.94 Aligned_cols=242 Identities=12% Similarity=0.056 Sum_probs=182.1
Q ss_pred cCCCc-EEEEECCCcEEEEcCCC--------------CCCCCCCCEEEEEECCCeEEEEECC---------CCeEEEEEc
Q psy7057 21 TPDGC-ILSASRDKSAKLWKPND--------------LSPGAKVNTLLSASWDMTAKLWCLE---------SQQCKLTIR 76 (557)
Q Consensus 21 spdg~-l~sgs~Dg~V~iWd~~~--------------~~~~~~~~~l~sgs~Dg~i~iwd~~---------~~~~~~~l~ 76 (557)
.+++. |++|+.||+|++||+.+ +.+++. +++++.|++|++|+.. +++.+..+.
T Consensus 45 ~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~ 121 (343)
T 3lrv_A 45 YYDKWVCMCRCEDGALHFTQLKDSKTITTITTPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVLREIE 121 (343)
T ss_dssp SEEEEEEEEEEETTEEEEEEESSSSCEEEEEEECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEE
T ss_pred cCCCCEEEEECCCCcEEEEECCCCcEEEEEecCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcceeEEee
Confidence 34555 88999999999999875 444544 9999999999999765 445444443
Q ss_pred -ccCCcEEEEEEcC--CC-EEEEEECCCeEEEEe-CCCcEEEEEe-CCCCCEEEEEEeCCCe-EEEEECCCeEEEEECCC
Q psy7057 77 -QHEMAVWGVIQLA--NG-IIVTGCADKTIKLHS-EEGEFLKTLT-GHTDCVRGLAVLNDTD-FVSCSNDASIRVWDSTT 149 (557)
Q Consensus 77 -~h~~~V~~l~~~~--~~-~l~sgs~dg~I~vwd-~~~~~~~~l~-~h~~~V~~l~~~~~~~-lvs~s~Dg~I~vwd~~~ 149 (557)
+|...|.+++|+| ++ .+++++.|++|++|| .+++++.... .|...|++++|+|++. |++|+.|+.|++||+++
T Consensus 122 ~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~ 201 (343)
T 3lrv_A 122 VDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSS 201 (343)
T ss_dssp CCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSC
T ss_pred cCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCC
Confidence 6778999999999 87 999999999999999 4556655553 4556899999999987 56889999999999999
Q ss_pred CeEE-EEEeC-CCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCCce---Eee---CCccE--EEEEEcCCCc-EEEEEc
Q psy7057 150 GKCV-HTMYG-HPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQNS---FMI---PAMSV--WAVAILPNSD-IVTGSS 216 (557)
Q Consensus 150 ~~~~-~~~~~-h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~~~---~~~---~~~~v--~~v~~~p~g~-l~sg~~ 216 (557)
++.+ ..+.. |...|.+++| ++.+|++++. +.|++||++.... +.. +...+ .+++|+|+++ +++++.
T Consensus 202 ~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~ 280 (343)
T 3lrv_A 202 PDQASSRFPVDEEAKIKEVKFADNGYWMVVECD-QTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSN 280 (343)
T ss_dssp TTSCCEECCCCTTSCEEEEEECTTSSEEEEEES-SBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEET
T ss_pred CCCCccEEeccCCCCEEEEEEeCCCCEEEEEeC-CeEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEecC
Confidence 9887 78888 9999999999 6779999994 5999999876622 221 22333 3699999999 778787
Q ss_pred -CCcEEEEecCCCCcchhHHHhcccceeEEEeccC--CCceeEEEEeCCCcEEEEecCC
Q psy7057 217 -DGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSAN--EQEIGGVKVSDDGIVRVFSANP 272 (557)
Q Consensus 217 -Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~--~~~~~~vs~s~DG~IrvW~~~~ 272 (557)
|+.|+||++......-.. ..+..+.+.+ .....+++++.||.++++-...
T Consensus 281 ~d~~i~v~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~~ 333 (343)
T 3lrv_A 281 ESNSLTIYKFDKKTKNWTK------DEESALCLQSDTADFTDMDVVCGDGGIAAILKTN 333 (343)
T ss_dssp TTTEEEEEEECTTTCSEEE------EEEEECCC----CCCCEEEEEEETTEEEEEEECS
T ss_pred CCCcEEEEEEcccccceEe------cCceeEecCccccccceeEEEecCCceEEEEecC
Confidence 999999998654322110 2333444433 1334678899999999986544
No 110
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.95 E-value=7.6e-26 Score=227.02 Aligned_cols=217 Identities=12% Similarity=0.043 Sum_probs=167.3
Q ss_pred CcEEEEEeccCccc-------------------------EEEEEEcCC----Cc-EEEEECCCcEEEEcCCCCCCCCCCC
Q psy7057 1 MYKLSTALYGHSMD-------------------------VRSLSVTPD----GC-ILSASRDKSAKLWKPNDLSPGAKVN 50 (557)
Q Consensus 1 ~~kl~~~l~gH~~~-------------------------V~~l~~spd----g~-l~sgs~Dg~V~iWd~~~~~~~~~~~ 50 (557)
+|++.+++++|+.+ |++|+++|| +. +++++ ..+++|++. .++
T Consensus 75 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~spd~~~~~~~l~s~g--~~~~v~~l~------~g~ 146 (356)
T 2w18_A 75 QWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFCSSDDESEKQVLLKSG--NIKAVLGLT------KRR 146 (356)
T ss_dssp BEEEEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC------CCEEEEEEE--EEEEEEEET------TTE
T ss_pred cceeeEEEeccCceeEEEEEcCcccceeeeeeccccccceEEEEECCCccccccEEEeCC--CeEEEEecC------CCc
Confidence 36777778777764 455555556 55 55555 347788762 344
Q ss_pred EEEEEE--CCCeEEEEEC-CCCeEEEEEcccCCcEEEEEEcC---CC-EEEEEECCCeEEEEe-CCCcEEEEEeCCC---
Q psy7057 51 TLLSAS--WDMTAKLWCL-ESQQCKLTIRQHEMAVWGVIQLA---NG-IIVTGCADKTIKLHS-EEGEFLKTLTGHT--- 119 (557)
Q Consensus 51 ~l~sgs--~Dg~i~iwd~-~~~~~~~~l~~h~~~V~~l~~~~---~~-~l~sgs~dg~I~vwd-~~~~~~~~l~~h~--- 119 (557)
.+.+++ .|++|++|++ .+++.+..+.+|...+..++|++ ++ .|++|+.|++|+||| .++++++++.+|.
T Consensus 147 lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v 226 (356)
T 2w18_A 147 LVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQ 226 (356)
T ss_dssp EEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---
T ss_pred EEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcce
Confidence 444433 5999999999 55888889999999999999998 45 999999999999999 5688999998754
Q ss_pred CCEEEEEEeCCCeE-------------EEEECCCeEEEEECCCCeEEEEE-----eCCCCcEEEEEEcCCEEEEEeCCCe
Q psy7057 120 DCVRGLAVLNDTDF-------------VSCSNDASIRVWDSTTGKCVHTM-----YGHPNFIYSVAAHGDLITSGGEDQC 181 (557)
Q Consensus 120 ~~V~~l~~~~~~~l-------------vs~s~Dg~I~vwd~~~~~~~~~~-----~~h~~~V~~l~~~~~~l~s~s~Dg~ 181 (557)
..+.+++|+|++.+ ++|+.|++|++||..+++++..+ .+|...+.+..+++..+++++.|++
T Consensus 227 ~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~sg~~lASgS~DgT 306 (356)
T 2w18_A 227 ASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVKDHCAAAILTSGT 306 (356)
T ss_dssp CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEETTEEEEEETTSC
T ss_pred eeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccccCCCEEEEEcCCCc
Confidence 46788899999873 46889999999999999988776 3777777677778889999999999
Q ss_pred EEEEECCCC---ceEeeCCccEE-EEEEcCCCc-EEEEEcCCcEEEEec
Q psy7057 182 VCVYQNKAQ---NSFMIPAMSVW-AVAILPNSD-IVTGSSDGIVRVFSA 225 (557)
Q Consensus 182 I~iwd~~~~---~~~~~~~~~v~-~v~~~p~g~-l~sg~~Dg~I~iwd~ 225 (557)
|+|||+.+. .++.+|...+. +++|+|+|+ |++|+.|++||||++
T Consensus 307 IkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 307 IAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp EEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred EEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 999998776 45666766555 689999999 889999999999985
No 111
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.94 E-value=3.8e-26 Score=238.23 Aligned_cols=232 Identities=22% Similarity=0.203 Sum_probs=188.1
Q ss_pred CCCCCCCCE-EEEEECCCeEEEEECCCCe----EEEEEcccCCcEEEEEEcC-CC-EEEEEECCCeEEEEeCC-C-----
Q psy7057 43 LSPGAKVNT-LLSASWDMTAKLWCLESQQ----CKLTIRQHEMAVWGVIQLA-NG-IIVTGCADKTIKLHSEE-G----- 109 (557)
Q Consensus 43 ~~~~~~~~~-l~sgs~Dg~i~iwd~~~~~----~~~~l~~h~~~V~~l~~~~-~~-~l~sgs~dg~I~vwd~~-~----- 109 (557)
++++++... +++++.||.|++|++.... ....+.+|...|++++|+| ++ +|++|+.|++|++|+.. +
T Consensus 40 ~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~ 119 (402)
T 2aq5_A 40 CAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLP 119 (402)
T ss_dssp EEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSC
T ss_pred EEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccc
Confidence 444444433 3357889999999996643 3445778999999999999 66 99999999999999943 3
Q ss_pred --cEEEEEeCCCCCEEEEEEeCCC--eEEEEECCCeEEEEECCCCeEEEEE--eCCCCcEEEEEE--cCCEEEEEeCCCe
Q psy7057 110 --EFLKTLTGHTDCVRGLAVLNDT--DFVSCSNDASIRVWDSTTGKCVHTM--YGHPNFIYSVAA--HGDLITSGGEDQC 181 (557)
Q Consensus 110 --~~~~~l~~h~~~V~~l~~~~~~--~lvs~s~Dg~I~vwd~~~~~~~~~~--~~h~~~V~~l~~--~~~~l~s~s~Dg~ 181 (557)
.++..+.+|...|++++|+|++ .|++++.|++|++||+++++++..+ ..|...|.+++| ++.+|++++.|+.
T Consensus 120 ~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~ 199 (402)
T 2aq5_A 120 LREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKR 199 (402)
T ss_dssp BCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSE
T ss_pred cCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCc
Confidence 5678899999999999999996 4789999999999999999999999 789999999999 6789999999999
Q ss_pred EEEEECCCC---ceE-eeCCcc-EEEEEEcCCCc-EEEE---EcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCC
Q psy7057 182 VCVYQNKAQ---NSF-MIPAMS-VWAVAILPNSD-IVTG---SSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQ 252 (557)
Q Consensus 182 I~iwd~~~~---~~~-~~~~~~-v~~v~~~p~g~-l~sg---~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~ 252 (557)
|++||+++. ..+ ..|... +.+++|+|++. +++| +.|+.|++||+.............+...+..+.+.+..
T Consensus 200 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~ 279 (402)
T 2aq5_A 200 VRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDT 279 (402)
T ss_dssp EEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTT
T ss_pred EEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCC
Confidence 999998876 333 455554 89999999999 5566 58999999999876542222222345567788888887
Q ss_pred ceeEEEEeCCCcEEEEecCCCh
Q psy7057 253 EIGGVKVSDDGIVRVFSANPDR 274 (557)
Q Consensus 253 ~~~~vs~s~DG~IrvW~~~~~~ 274 (557)
...+++++.||.|++|++..++
T Consensus 280 ~~l~~~g~~dg~i~i~d~~~~~ 301 (402)
T 2aq5_A 280 NIVYLCGKGDSSIRYFEITSEA 301 (402)
T ss_dssp TEEEEEETTCSCEEEEEECSST
T ss_pred CEEEEEEcCCCeEEEEEecCCC
Confidence 7766788899999999998764
No 112
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.94 E-value=3.6e-25 Score=232.98 Aligned_cols=228 Identities=16% Similarity=0.172 Sum_probs=176.1
Q ss_pred CCCCCCCCEEEEEECCCeEEEEECCCCe-----------EEEEEcccC------------CcEEEEEEcCCC---EEEEE
Q psy7057 43 LSPGAKVNTLLSASWDMTAKLWCLESQQ-----------CKLTIRQHE------------MAVWGVIQLANG---IIVTG 96 (557)
Q Consensus 43 ~~~~~~~~~l~sgs~Dg~i~iwd~~~~~-----------~~~~l~~h~------------~~V~~l~~~~~~---~l~sg 96 (557)
+++++++.+|++|+.||.|+||++.+++ +...+.+|. ..|.+++|+|++ .|+++
T Consensus 34 v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~l~s~ 113 (447)
T 3dw8_B 34 VEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLS 113 (447)
T ss_dssp EEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSSSEEEEE
T ss_pred EEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCCcceEEEe
Confidence 5677889999999999999999998876 578899998 889999999974 89999
Q ss_pred ECCCeEEEEeCCCcE----------------------------------------EEE-EeCCCCCEEEEEEeCCCe-EE
Q psy7057 97 CADKTIKLHSEEGEF----------------------------------------LKT-LTGHTDCVRGLAVLNDTD-FV 134 (557)
Q Consensus 97 s~dg~I~vwd~~~~~----------------------------------------~~~-l~~h~~~V~~l~~~~~~~-lv 134 (557)
+.|++|++|+..... ... +.+|...|++++|+|++. |+
T Consensus 114 s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 193 (447)
T 3dw8_B 114 TNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINSDYETYL 193 (447)
T ss_dssp ECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECTTSSEEE
T ss_pred CCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcCCCCEEE
Confidence 999999999943211 112 367999999999999987 55
Q ss_pred EEECCCeEEEEECCC-CeEEEE-------EeCCCCcEEEEEE--cC-CEEEEEeCCCeEEEEECCCC-------ceEeeC
Q psy7057 135 SCSNDASIRVWDSTT-GKCVHT-------MYGHPNFIYSVAA--HG-DLITSGGEDQCVCVYQNKAQ-------NSFMIP 196 (557)
Q Consensus 135 s~s~Dg~I~vwd~~~-~~~~~~-------~~~h~~~V~~l~~--~~-~~l~s~s~Dg~I~iwd~~~~-------~~~~~~ 196 (557)
+| .|++|++||+++ ++++.. +.+|...|.+++| ++ .+|++++.|+.|++||++.. ..+..|
T Consensus 194 s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 272 (447)
T 3dw8_B 194 SA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEP 272 (447)
T ss_dssp EE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC
T ss_pred Ee-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccceeeEeccC
Confidence 66 899999999984 444443 4579999999999 45 79999999999999997653 345555
Q ss_pred Cc------------cEEEEEEcCCCc-EEEEEcCCcEEEEecCC-CCcchhHHHhcccc---------------eeEEEe
Q psy7057 197 AM------------SVWAVAILPNSD-IVTGSSDGIVRVFSANP-DRQAEDAVQAQYAE---------------EVKKLK 247 (557)
Q Consensus 197 ~~------------~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~-~~~~~~~~~~~~~~---------------~v~~l~ 247 (557)
.. .|.+++|+|+++ |++++. +.|++||+.. .+...... .+.. .+..+.
T Consensus 273 ~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~--~~~~~~~~l~~~~~~~~i~~~~~~~ 349 (447)
T 3dw8_B 273 EDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQ--VHEYLRSKLCSLYENDCIFDKFECC 349 (447)
T ss_dssp -----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEE--SCGGGTTTHHHHHHTSGGGCCCCEE
T ss_pred CCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceee--ccccccccccccccccccccceEEE
Confidence 54 899999999999 777777 9999999986 44332111 1111 122255
Q ss_pred ccCCCceeEEEEeCCCcEEEEecCCChh
Q psy7057 248 SANEQEIGGVKVSDDGIVRVFSANPDRQ 275 (557)
Q Consensus 248 ~~~~~~~~~vs~s~DG~IrvW~~~~~~~ 275 (557)
+.+... .+++++.||.|++|++..++.
T Consensus 350 ~s~~~~-~l~s~s~dg~v~iwd~~~~~~ 376 (447)
T 3dw8_B 350 WNGSDS-VVMTGSYNNFFRMFDRNTKRD 376 (447)
T ss_dssp ECTTSS-EEEEECSTTEEEEEETTTCCE
T ss_pred ECCCCC-EEEEeccCCEEEEEEcCCCcc
Confidence 555544 579999999999999987643
No 113
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.94 E-value=7.8e-25 Score=224.30 Aligned_cols=203 Identities=17% Similarity=0.251 Sum_probs=166.7
Q ss_pred EEEEEeccCcccEEEEEEcCCCcEEEEECCCcEEEEcCCCCCCCCCCCEEEEEECCCeEEEEECCCCe--EEEEEcccCC
Q psy7057 3 KLSTALYGHSMDVRSLSVTPDGCILSASRDKSAKLWKPNDLSPGAKVNTLLSASWDMTAKLWCLESQQ--CKLTIRQHEM 80 (557)
Q Consensus 3 kl~~~l~gH~~~V~~l~~spdg~l~sgs~Dg~V~iWd~~~~~~~~~~~~l~sgs~Dg~i~iwd~~~~~--~~~~l~~h~~ 80 (557)
++.+.+.+|.+.|++++|+++. ++.+|++|+.|++|++||+.+++ .+..+..|..
T Consensus 46 ~~~~~~~~h~~~v~~~~~~~~~-----------------------~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~ 102 (379)
T 3jrp_A 46 KLIDTLTGHEGPVWRVDWAHPK-----------------------FGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSA 102 (379)
T ss_dssp EEEEEECCCSSCEEEEEECCGG-----------------------GCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSS
T ss_pred eeeeEecCCCCcEEEEEeCCCC-----------------------CCCEEEEeccCCEEEEEEcCCCceeEeeeecCCCc
Confidence 3556788999999999998762 24556666666667777776665 6778888999
Q ss_pred cEEEEEEcCC--C-EEEEEECCCeEEEEeCCC---cEEEEEeCCCCCEEEEEEeC-------------CCe-EEEEECCC
Q psy7057 81 AVWGVIQLAN--G-IIVTGCADKTIKLHSEEG---EFLKTLTGHTDCVRGLAVLN-------------DTD-FVSCSNDA 140 (557)
Q Consensus 81 ~V~~l~~~~~--~-~l~sgs~dg~I~vwd~~~---~~~~~l~~h~~~V~~l~~~~-------------~~~-lvs~s~Dg 140 (557)
.|.+++|+|+ + .+++++.|+.|++||... .....+..|...|.+++|+| ++. +++++.|+
T Consensus 103 ~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg 182 (379)
T 3jrp_A 103 SVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADN 182 (379)
T ss_dssp CEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTS
T ss_pred ceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCC
Confidence 9999999998 6 999999999999999433 34567788999999999999 444 78999999
Q ss_pred eEEEEECCCCe----EEEEEeCCCCcEEEEEE--c---CCEEEEEeCCCeEEEEECCCC-----ceE---eeCCccEEEE
Q psy7057 141 SIRVWDSTTGK----CVHTMYGHPNFIYSVAA--H---GDLITSGGEDQCVCVYQNKAQ-----NSF---MIPAMSVWAV 203 (557)
Q Consensus 141 ~I~vwd~~~~~----~~~~~~~h~~~V~~l~~--~---~~~l~s~s~Dg~I~iwd~~~~-----~~~---~~~~~~v~~v 203 (557)
.|++||+++++ ++..+.+|...|.+++| + +.+|++++.|+.|++||+... ..+ ..+...|+++
T Consensus 183 ~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~ 262 (379)
T 3jrp_A 183 LVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRA 262 (379)
T ss_dssp CEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEE
T ss_pred eEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEE
Confidence 99999997654 56778899999999999 4 678999999999999997653 111 2267789999
Q ss_pred EEcCCCc-EEEEEcCCcEEEEecCCC
Q psy7057 204 AILPNSD-IVTGSSDGIVRVFSANPD 228 (557)
Q Consensus 204 ~~~p~g~-l~sg~~Dg~I~iwd~~~~ 228 (557)
+|+|++. |++++.||.|++|++...
T Consensus 263 ~~s~~g~~l~~~~~dg~i~iw~~~~~ 288 (379)
T 3jrp_A 263 SWSLSGNVLALSGGDNKVTLWKENLE 288 (379)
T ss_dssp EECSSSCCEEEEESSSSEEEEEEEET
T ss_pred EEcCCCCEEEEecCCCcEEEEeCCCC
Confidence 9999998 889999999999998753
No 114
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.94 E-value=1.6e-25 Score=238.27 Aligned_cols=252 Identities=10% Similarity=0.033 Sum_probs=194.6
Q ss_pred ccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC---CCCCCCCCEEEEEECCCeEEEEECCCCeEEEEEc-ccCCcEE
Q psy7057 9 YGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND---LSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIR-QHEMAVW 83 (557)
Q Consensus 9 ~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~---~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~-~h~~~V~ 83 (557)
+.-...|.+|+|+|||+ +||++.|++|+ |... +.-++..-+-+.-+-||+++.|++.+++....+. .|...|.
T Consensus 12 ~~~~~~v~sv~~SpDG~~iASas~D~TV~--d~~~~~~l~gh~~~v~~V~FsPdg~~~~~~~~~~~~~~~~~~~~~~~V~ 89 (588)
T 2j04_A 12 KEFEDWKNNLTWARDGTLYLTTFPDISIG--QPKYAKDINCNSKNLFHVKEFPLEFENKLDFELAQQNGLLNSQPVCYPR 89 (588)
T ss_dssp CCCSSSSCCEEECTTSCEEEECSSSEEEE--EECCCSCCSSBGGGTEEEEEECCCCCCTTTTSCCCSSCSSTTSCSCCEE
T ss_pred hHhhccEEEEEECCCCCEEEEEcCCceee--cccccceecCCCccEEEEEECCCCCcceEEEEeCCCceEeecCCCCcEE
Confidence 34567899999999998 88999999999 6544 2222223344555667777777777665333333 5688999
Q ss_pred EEEEcCCC-EEEEEECCCeEEEEeCCCcEEEEEeCCCC-----CEEEEEEeCCCe-EEEEECCCeEEEEECCCCe-----
Q psy7057 84 GVIQLANG-IIVTGCADKTIKLHSEEGEFLKTLTGHTD-----CVRGLAVLNDTD-FVSCSNDASIRVWDSTTGK----- 151 (557)
Q Consensus 84 ~l~~~~~~-~l~sgs~dg~I~vwd~~~~~~~~l~~h~~-----~V~~l~~~~~~~-lvs~s~Dg~I~vwd~~~~~----- 151 (557)
+++|+|+| .|++++.||+|++|+..+ ++..+. |.. .|.+++|+|+|+ |++|+.||+|++||+.+++
T Consensus 90 ~vawSPdG~~LAs~s~dg~V~iwd~~~-~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~ 167 (588)
T 2j04_A 90 VCKPSPIDDWMAVLSNNGNVSVFKDNK-MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPE 167 (588)
T ss_dssp EEEECSSSSCEEEEETTSCEEEEETTE-EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCC
T ss_pred EEEECCCCCEEEEEeCCCcEEEEeCCc-eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCcccccc
Confidence 99999999 899999999999999655 666777 665 499999999988 7799999999999998875
Q ss_pred --EEEEE----eCCCCcEEEEEEcCCEEEEEeCCCeEEEEECCCCc------eE-eeCCccEEEEEEcCCCcEEEEEcCC
Q psy7057 152 --CVHTM----YGHPNFIYSVAAHGDLITSGGEDQCVCVYQNKAQN------SF-MIPAMSVWAVAILPNSDIVTGSSDG 218 (557)
Q Consensus 152 --~~~~~----~~h~~~V~~l~~~~~~l~s~s~Dg~I~iwd~~~~~------~~-~~~~~~v~~v~~~p~g~l~sg~~Dg 218 (557)
.+.++ .+|...|.+++|.++.+++++.|++|++|++.... ++ ..|...|.+++|+ +..+++++ ++
T Consensus 168 ~i~l~ti~~~~~gh~~~V~sVawSPdgLaass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs-g~~LASa~-~~ 245 (588)
T 2j04_A 168 FYFESSIRLSDAGSKDWVTHIVWYEDVLVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV-DYKVVLTC-PG 245 (588)
T ss_dssp CEEEEEEECSCTTCCCCEEEEEEETTEEEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE-TTEEEEEC-SS
T ss_pred ceeeeeeecccccccccEEEEEEcCCcEEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE-CCEEEEEe-CC
Confidence 46777 56788999999943338999999999999976542 35 3677899999999 43377776 79
Q ss_pred cEEEEecCCCCcchhHHHhcccceeEEEec--cCCCceeEEEEeCCCcEEEEec
Q psy7057 219 IVRVFSANPDRQAEDAVQAQYAEEVKKLKS--ANEQEIGGVKVSDDGIVRVFSA 270 (557)
Q Consensus 219 ~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~--~~~~~~~~vs~s~DG~IrvW~~ 270 (557)
+|++|++.+.+...... +|...+..+.+ .++ ...+++++.||+ |+|..
T Consensus 246 tIkLWd~~~~~~~~~~~--gh~~~V~~va~~~s~d-~~~La~a~edG~-klw~~ 295 (588)
T 2j04_A 246 YVHKIDLKNYSISSLKT--GSLENFHIIPLNHEKE-STILLMSNKTSY-KVLLE 295 (588)
T ss_dssp EEEEEETTTTEEEEEEC--SCCSCCCEEEETTCSS-CEEEEECSSCEE-EEEES
T ss_pred eEEEEECCCCeEEEEEc--CCCceEEEEEeeeCCC-CCEEEEEcCCCC-EEEee
Confidence 99999998776532221 47777887777 433 345788889999 99997
No 115
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.93 E-value=1.5e-25 Score=233.69 Aligned_cols=218 Identities=11% Similarity=0.033 Sum_probs=159.1
Q ss_pred CCCEEEEEECCCeEEEEECCCCeEEE-----EEcccCCcEEEEEEcC--------CC-EEEEEECCCeEEEEe-CCCcEE
Q psy7057 48 KVNTLLSASWDMTAKLWCLESQQCKL-----TIRQHEMAVWGVIQLA--------NG-IIVTGCADKTIKLHS-EEGEFL 112 (557)
Q Consensus 48 ~~~~l~sgs~Dg~i~iwd~~~~~~~~-----~l~~h~~~V~~l~~~~--------~~-~l~sgs~dg~I~vwd-~~~~~~ 112 (557)
.+.+|++++.|++|+|||+.+++... .+.+|...|++++|+| ++ +|++|+.|++|+||| .++.++
T Consensus 100 ~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~ 179 (393)
T 4gq1_A 100 YSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPI 179 (393)
T ss_dssp EEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEE
T ss_pred CCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCcee
Confidence 34579999999999999998886543 3578999999999987 55 899999999999999 466778
Q ss_pred EEEeCCCCCEEEEEEeCCC--eEEEEECCCeEEEEECCCCeEEEEE-------------------------eCCCCcEEE
Q psy7057 113 KTLTGHTDCVRGLAVLNDT--DFVSCSNDASIRVWDSTTGKCVHTM-------------------------YGHPNFIYS 165 (557)
Q Consensus 113 ~~l~~h~~~V~~l~~~~~~--~lvs~s~Dg~I~vwd~~~~~~~~~~-------------------------~~h~~~V~~ 165 (557)
..+.+|...|.+++|+|++ .|++++.|++|++||+++++..... .+|...+.+
T Consensus 180 ~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~ 259 (393)
T 4gq1_A 180 LAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLAN 259 (393)
T ss_dssp EEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSE
T ss_pred eeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeeccccccccee
Confidence 8888899999999999985 3779999999999999887654332 356777888
Q ss_pred EEE---cCCEEEEEeCCCeEEEEECCCC---ceEeeCCccEEE------------------EEEcCC--Cc-EEEEEcCC
Q psy7057 166 VAA---HGDLITSGGEDQCVCVYQNKAQ---NSFMIPAMSVWA------------------VAILPN--SD-IVTGSSDG 218 (557)
Q Consensus 166 l~~---~~~~l~s~s~Dg~I~iwd~~~~---~~~~~~~~~v~~------------------v~~~p~--g~-l~sg~~Dg 218 (557)
+.+ ++..|++++.|+++++||+... ..+..+...+.. +.++|. +. +++|+.||
T Consensus 260 v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg 339 (393)
T 4gq1_A 260 VRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHG 339 (393)
T ss_dssp EEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTT
T ss_pred eeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECCCC
Confidence 887 6789999999999999997543 333333333333 233432 22 45677899
Q ss_pred cEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEe
Q psy7057 219 IVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFS 269 (557)
Q Consensus 219 ~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~ 269 (557)
+|++||+.++..... ...+...|..+.+.++.. .+++++.||. .+|.
T Consensus 340 ~V~lwd~~~~~~~~~--~~~~~~~V~svafspdG~-~LA~as~~Gv-~lvr 386 (393)
T 4gq1_A 340 LIQLINTYEKDSNSI--PIQLGMPIVDFCWHQDGS-HLAIATEGSV-LLTR 386 (393)
T ss_dssp EEEEEETTCTTCCEE--EEECSSCEEEEEECTTSS-EEEEEESSEE-EEEE
T ss_pred EEEEEECCCCcEEEE--ecCCCCcEEEEEEcCCCC-EEEEEeCCCe-EEEE
Confidence 999999988765432 334667899999988766 4677777764 4443
No 116
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.93 E-value=2.6e-25 Score=225.32 Aligned_cols=227 Identities=16% Similarity=0.137 Sum_probs=189.0
Q ss_pred CCCCCCCCEEEEEECCCeEEEEECCCCe---EEEEEcccCCcEEEEEEcCCC--EEEEEECCCeEEEEeC-CCcEEEEEe
Q psy7057 43 LSPGAKVNTLLSASWDMTAKLWCLESQQ---CKLTIRQHEMAVWGVIQLANG--IIVTGCADKTIKLHSE-EGEFLKTLT 116 (557)
Q Consensus 43 ~~~~~~~~~l~sgs~Dg~i~iwd~~~~~---~~~~l~~h~~~V~~l~~~~~~--~l~sgs~dg~I~vwd~-~~~~~~~l~ 116 (557)
+++++++.+|++++.|+.|++|++.+++ ....+..|...|.+++|+|++ .|++|+.|+.|++||. .......+.
T Consensus 17 ~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~ 96 (342)
T 1yfq_A 17 IKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALT 96 (342)
T ss_dssp EEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSEEECB
T ss_pred EEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCceEecc
Confidence 3456678999999999999999998876 455566899999999999876 5999999999999998 877778888
Q ss_pred C--CCCCEEEEEEeCCCeEEEEECCCeEEEEECCC---------CeEEEEEeCCCCcEEEEEEcCCEEEEEeCCCeEEEE
Q psy7057 117 G--HTDCVRGLAVLNDTDFVSCSNDASIRVWDSTT---------GKCVHTMYGHPNFIYSVAAHGDLITSGGEDQCVCVY 185 (557)
Q Consensus 117 ~--h~~~V~~l~~~~~~~lvs~s~Dg~I~vwd~~~---------~~~~~~~~~h~~~V~~l~~~~~~l~s~s~Dg~I~iw 185 (557)
+ |...|.+++|+|...+++++.|+.|++||+++ ++++..+. |...|.+++++++.+++++.|+.|++|
T Consensus 97 ~~~~~~~v~~l~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~l~~~~~d~~i~i~ 175 (342)
T 1yfq_A 97 NNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMDTNSSRLIVGMNNSQVQWF 175 (342)
T ss_dssp SCCCCSCEEEEEEETTTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCCEEEEEECSSEEEEEESTTEEEEE
T ss_pred ccCCCCceEEEEeCCCCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCCceEEEEecCCcEEEEeCCCeEEEE
Confidence 9 99999999999944588999999999999987 66666666 899999999977779999999999999
Q ss_pred ECCC-C-----ceEeeCCccEEEEEEcC-CCc-EEEEEcCCcEEEEecCCC------CcchhHHHhcc---------cce
Q psy7057 186 QNKA-Q-----NSFMIPAMSVWAVAILP-NSD-IVTGSSDGIVRVFSANPD------RQAEDAVQAQY---------AEE 242 (557)
Q Consensus 186 d~~~-~-----~~~~~~~~~v~~v~~~p-~g~-l~sg~~Dg~I~iwd~~~~------~~~~~~~~~~~---------~~~ 242 (557)
|++. . .....+...+.+++|+| ++. +++++.||.|++|+++.. ... .....+ ...
T Consensus 176 d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 253 (342)
T 1yfq_A 176 RLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKR--FAFRCHRLNLKDTNLAYP 253 (342)
T ss_dssp ESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTC--EEEECCCCCTTCCSSCCC
T ss_pred ECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccc--eeeeccccccccccccee
Confidence 9877 3 23345677899999999 888 899999999999999875 222 122223 337
Q ss_pred eEEEeccCCCceeEEEEeCCCcEEEEecCCC
Q psy7057 243 VKKLKSANEQEIGGVKVSDDGIVRVFSANPD 273 (557)
Q Consensus 243 v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~~ 273 (557)
+..+.+.+... .+++++.||.|++|++...
T Consensus 254 i~~~~~s~~~~-~l~~~~~dg~i~vwd~~~~ 283 (342)
T 1yfq_A 254 VNSIEFSPRHK-FLYTAGSDGIISCWNLQTR 283 (342)
T ss_dssp EEEEEECTTTC-CEEEEETTSCEEEEETTTT
T ss_pred EEEEEEcCCCC-EEEEecCCceEEEEcCccH
Confidence 88888877544 5899999999999998754
No 117
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.93 E-value=7.4e-25 Score=247.69 Aligned_cols=229 Identities=16% Similarity=0.173 Sum_probs=192.3
Q ss_pred CCCCCCCCEEEEEECCCeEEEEECC--CCeEEEEEcccCCcEEEEEEcCC--C-EEEEEECCCeEEEEeC-CCc--EEEE
Q psy7057 43 LSPGAKVNTLLSASWDMTAKLWCLE--SQQCKLTIRQHEMAVWGVIQLAN--G-IIVTGCADKTIKLHSE-EGE--FLKT 114 (557)
Q Consensus 43 ~~~~~~~~~l~sgs~Dg~i~iwd~~--~~~~~~~l~~h~~~V~~l~~~~~--~-~l~sgs~dg~I~vwd~-~~~--~~~~ 114 (557)
+.+++++++|++|+.||+|++|++. +++....+.+|...|++++|+++ + .|++|+.||.|++||. ++. .+..
T Consensus 15 l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~ 94 (753)
T 3jro_A 15 AVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAV 94 (753)
T ss_dssp ECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEE
T ss_pred EEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCccccccc
Confidence 4577889999999999999999998 55778889999999999999886 6 9999999999999994 443 6778
Q ss_pred EeCCCCCEEEEEEeCC--Ce-EEEEECCCeEEEEECCCC--eEEEEEeCCCCcEEEEEEc---------------CCEEE
Q psy7057 115 LTGHTDCVRGLAVLND--TD-FVSCSNDASIRVWDSTTG--KCVHTMYGHPNFIYSVAAH---------------GDLIT 174 (557)
Q Consensus 115 l~~h~~~V~~l~~~~~--~~-lvs~s~Dg~I~vwd~~~~--~~~~~~~~h~~~V~~l~~~---------------~~~l~ 174 (557)
+.+|...|++++|+|+ +. +++|+.||+|++||++++ .....+.+|...|.+++++ +..++
T Consensus 95 ~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~ 174 (753)
T 3jro_A 95 HAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFV 174 (753)
T ss_dssp ECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEE
T ss_pred ccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEE
Confidence 8899999999999998 55 779999999999999877 3455677899999999993 56899
Q ss_pred EEeCCCeEEEEECCCC-------ceEeeCCccEEEEEEcCC---Cc-EEEEEcCCcEEEEecCCCCcc---hhHHHhccc
Q psy7057 175 SGGEDQCVCVYQNKAQ-------NSFMIPAMSVWAVAILPN---SD-IVTGSSDGIVRVFSANPDRQA---EDAVQAQYA 240 (557)
Q Consensus 175 s~s~Dg~I~iwd~~~~-------~~~~~~~~~v~~v~~~p~---g~-l~sg~~Dg~I~iwd~~~~~~~---~~~~~~~~~ 240 (557)
+|+.||+|++||++.. ..+..|...|++++|+|+ +. +++++.||.|++|++...... .......+.
T Consensus 175 sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~ 254 (753)
T 3jro_A 175 TGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFP 254 (753)
T ss_dssp EEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCS
T ss_pred EEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCcceeEEeccCCCC
Confidence 9999999999996543 355678899999999999 77 899999999999999876321 122233466
Q ss_pred ceeEEEeccCCCceeEEEEeCCCcEEEEecCC
Q psy7057 241 EEVKKLKSANEQEIGGVKVSDDGIVRVFSANP 272 (557)
Q Consensus 241 ~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~ 272 (557)
..+..+.+.+... .+++++.||.|++|++..
T Consensus 255 ~~v~~l~~spdg~-~l~s~s~Dg~I~vwd~~~ 285 (753)
T 3jro_A 255 DVLWRASWSLSGN-VLALSGGDNKVTLWKENL 285 (753)
T ss_dssp SCCCCEEECTTTC-CEEEECSSSCEECCBCCS
T ss_pred CceEEEEEcCCCC-EEEEEcCCCEEEEEecCC
Confidence 7788888877654 689999999999999985
No 118
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.93 E-value=3.7e-25 Score=235.53 Aligned_cols=208 Identities=11% Similarity=0.061 Sum_probs=178.1
Q ss_pred EeccCcccEEEEEEcCCCcEEEEECCCcEEEEcCCC--------------CCCCCCCCEEEEEECCCeEEEEECCCCeEE
Q psy7057 7 ALYGHSMDVRSLSVTPDGCILSASRDKSAKLWKPND--------------LSPGAKVNTLLSASWDMTAKLWCLESQQCK 72 (557)
Q Consensus 7 ~l~gH~~~V~~l~~spdg~l~sgs~Dg~V~iWd~~~--------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~ 72 (557)
.+.+|...|++++|+|+| .++++.+|+.+. ++++|++..|++++.||+|++|+.++ ++
T Consensus 47 ~l~gh~~~v~~V~FsPdg------~~~~~~~~~~~~~~~~~~~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l 118 (588)
T 2j04_A 47 DINCNSKNLFHVKEFPLE------FENKLDFELAQQNGLLNSQPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--ML 118 (588)
T ss_dssp CCSSBGGGTEEEEEECCC------CCCTTTTSCCCSSCSSTTSCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EE
T ss_pred eecCCCccEEEEEECCCC------CcceEEEEeCCCceEeecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--ee
Confidence 457999999999999998 677777776552 77889999999999999999999544 66
Q ss_pred EEEcccCC-----cEEEEEEcCCC-EEEEEECCCeEEEEeCCCc--------EEEEE----eCCCCCEEEEEEeCCCeEE
Q psy7057 73 LTIRQHEM-----AVWGVIQLANG-IIVTGCADKTIKLHSEEGE--------FLKTL----TGHTDCVRGLAVLNDTDFV 134 (557)
Q Consensus 73 ~~l~~h~~-----~V~~l~~~~~~-~l~sgs~dg~I~vwd~~~~--------~~~~l----~~h~~~V~~l~~~~~~~lv 134 (557)
..+. |.. .|.+++|+|+| .|++|+.||+|++||..+. .+.++ .+|...|.+++|+|++ ++
T Consensus 119 ~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg-La 196 (588)
T 2j04_A 119 TNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV-LV 196 (588)
T ss_dssp EECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE-EE
T ss_pred eecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc-EE
Confidence 6667 665 49999999999 9999999999999995544 35776 6788899999999999 99
Q ss_pred EEECCCeEEEEECCCCe---EEEEEe-CCCCcEEEEEEcCCEEEEEeCCCeEEEEECCCC--ceEe-eCCccEEEEEE--
Q psy7057 135 SCSNDASIRVWDSTTGK---CVHTMY-GHPNFIYSVAAHGDLITSGGEDQCVCVYQNKAQ--NSFM-IPAMSVWAVAI-- 205 (557)
Q Consensus 135 s~s~Dg~I~vwd~~~~~---~~~~~~-~h~~~V~~l~~~~~~l~s~s~Dg~I~iwd~~~~--~~~~-~~~~~v~~v~~-- 205 (557)
+++.|++|++||+.+++ ..+++. +|...|.+++|.+..|++++ +++|++||.... ..+. +|...++++++
T Consensus 197 ass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFsg~~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~ 275 (588)
T 2j04_A 197 AALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIVDYKVVLTC-PGYVHKIDLKNYSISSLKTGSLENFHIIPLNH 275 (588)
T ss_dssp EEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEETTEEEEEC-SSEEEEEETTTTEEEEEECSCCSCCCEEEETT
T ss_pred EEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEECCEEEEEe-CCeEEEEECCCCeEEEEEcCCCceEEEEEeee
Confidence 99999999999998777 345674 78899999999878888887 699999997766 2444 78899999999
Q ss_pred cCCCc-EEEEEcCCcEEEEecC
Q psy7057 206 LPNSD-IVTGSSDGIVRVFSAN 226 (557)
Q Consensus 206 ~p~g~-l~sg~~Dg~I~iwd~~ 226 (557)
+|++. ++++++||+ ++|..+
T Consensus 276 s~d~~~La~a~edG~-klw~~d 296 (588)
T 2j04_A 276 EKESTILLMSNKTSY-KVLLED 296 (588)
T ss_dssp CSSCEEEEECSSCEE-EEEESS
T ss_pred CCCCCEEEEEcCCCC-EEEeec
Confidence 99998 888999999 999987
No 119
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.93 E-value=1.4e-23 Score=220.35 Aligned_cols=263 Identities=12% Similarity=0.100 Sum_probs=204.7
Q ss_pred EEEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC---------------------CCCCCCCCEEEEEECCCe
Q psy7057 3 KLSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND---------------------LSPGAKVNTLLSASWDMT 60 (557)
Q Consensus 3 kl~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~---------------------~~~~~~~~~l~sgs~Dg~ 60 (557)
+....+..|. .+.+++|+|++. +++++.+++|++||+.+ +.+++++..+++++.|+.
T Consensus 114 ~~~~~~~~~~-~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~ 192 (433)
T 3bws_A 114 RFISRFKTGF-QPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANA 192 (433)
T ss_dssp EEEEEEECSS-CBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTE
T ss_pred eEEEEEcCCC-CceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCE
Confidence 4555666554 456999999777 56777889999999875 344567889999999999
Q ss_pred EEEEECCCCeEEEEEcccCCcEEEEEEcCCC-EE-EEEECCCeEEEEeC-CCcEEEEEeCCCCCEEEEEEeCCCe-EEEE
Q psy7057 61 AKLWCLESQQCKLTIRQHEMAVWGVIQLANG-II-VTGCADKTIKLHSE-EGEFLKTLTGHTDCVRGLAVLNDTD-FVSC 136 (557)
Q Consensus 61 i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l-~sgs~dg~I~vwd~-~~~~~~~l~~h~~~V~~l~~~~~~~-lvs~ 136 (557)
|++||+.+++.+..+..|...+.+++|+|++ .+ ++++.|+.|++||. +++.+..+.. ...+.+++++|++. ++++
T Consensus 193 v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~-~~~~~~~~~~~~g~~l~~~ 271 (433)
T 3bws_A 193 VHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDK-IGLPRGLLLSKDGKELYIA 271 (433)
T ss_dssp EEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCC-CSEEEEEEECTTSSEEEEE
T ss_pred EEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecC-CCCceEEEEcCCCCEEEEE
Confidence 9999999999999999999999999999988 55 55668999999995 5666666654 45699999999985 6666
Q ss_pred E--------CCCeEEEEECCCCeEEEEEeCCCCcEEEEEE--cCC-EEEEEeCCCeEEEEECCCCc--eEeeCCccEEEE
Q psy7057 137 S--------NDASIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGD-LITSGGEDQCVCVYQNKAQN--SFMIPAMSVWAV 203 (557)
Q Consensus 137 s--------~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~-~l~s~s~Dg~I~iwd~~~~~--~~~~~~~~v~~v 203 (557)
+ .|+.|++||+++++.+..+ .|...+.++++ +++ .+++++.|+.|++||..+.. ....+...+.++
T Consensus 272 ~~~~~~~~~~dg~i~~~d~~~~~~~~~~-~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~ 350 (433)
T 3bws_A 272 QFSASNQESGGGRLGIYSMDKEKLIDTI-GPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIPVFDKPNTI 350 (433)
T ss_dssp EEESCTTCSCCEEEEEEETTTTEEEEEE-EEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEE
T ss_pred ECCCCccccCCCeEEEEECCCCcEEeec-cCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEecCCCCCCeE
Confidence 6 5889999999999887766 46668889998 555 45677899999999987662 223456789999
Q ss_pred EEcCCCc-EEEEEc---------------CCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEE
Q psy7057 204 AILPNSD-IVTGSS---------------DGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRV 267 (557)
Q Consensus 204 ~~~p~g~-l~sg~~---------------Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~Irv 267 (557)
+|+|+++ +++++. ||.|++||..+.+...... ....+..+.+.+.....+++++.||.|++
T Consensus 351 ~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~---~~~~~~~~~~s~dg~~l~~~~~~d~~i~v 427 (433)
T 3bws_A 351 ALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWE---AGNQPTGLDVSPDNRYLVISDFLDHQIRV 427 (433)
T ss_dssp EECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEE---CSSSEEEEEECTTSCEEEEEETTTTEEEE
T ss_pred EEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEec---CCCCCceEEEcCCCCEEEEEECCCCeEEE
Confidence 9999998 666665 5799999998776543222 13456777777776654445556999999
Q ss_pred EecC
Q psy7057 268 FSAN 271 (557)
Q Consensus 268 W~~~ 271 (557)
|+++
T Consensus 428 ~~~~ 431 (433)
T 3bws_A 428 YRRD 431 (433)
T ss_dssp EEET
T ss_pred EEec
Confidence 9976
No 120
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.93 E-value=8.6e-25 Score=227.97 Aligned_cols=206 Identities=8% Similarity=0.071 Sum_probs=147.4
Q ss_pred EcCCCc-EEEEECCCcEEEEcCCC---------------------CCCCC--------CCCEEEEEECCCeEEEEECCCC
Q psy7057 20 VTPDGC-ILSASRDKSAKLWKPND---------------------LSPGA--------KVNTLLSASWDMTAKLWCLESQ 69 (557)
Q Consensus 20 ~spdg~-l~sgs~Dg~V~iWd~~~---------------------~~~~~--------~~~~l~sgs~Dg~i~iwd~~~~ 69 (557)
+++++. |++++.|++|+|||... ++++| ++++|++|+.|++|+|||+.++
T Consensus 97 ~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~ 176 (393)
T 4gq1_A 97 SPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDE 176 (393)
T ss_dssp CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETT
T ss_pred cCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCC
Confidence 334445 88999999999998754 33433 5789999999999999999999
Q ss_pred eEEEEEcccCCcEEEEEEcCCC--EEEEEECCCeEEEEeCC-CcEEE-------------------------EEeCCCCC
Q psy7057 70 QCKLTIRQHEMAVWGVIQLANG--IIVTGCADKTIKLHSEE-GEFLK-------------------------TLTGHTDC 121 (557)
Q Consensus 70 ~~~~~l~~h~~~V~~l~~~~~~--~l~sgs~dg~I~vwd~~-~~~~~-------------------------~l~~h~~~ 121 (557)
.++..+..|...|.+++|+|++ +|++|+.|++|++||.. +.... ...+|...
T Consensus 177 ~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 256 (393)
T 4gq1_A 177 GPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASS 256 (393)
T ss_dssp EEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSS
T ss_pred ceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeeccccccc
Confidence 8888888999999999999976 79999999999999943 22211 12467888
Q ss_pred EEEEEEe-CCCe-EEEEECCCeEEEEECCCCeEEEEEeCCCCcEEEEE------------------E----cCCEEEEEe
Q psy7057 122 VRGLAVL-NDTD-FVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVA------------------A----HGDLITSGG 177 (557)
Q Consensus 122 V~~l~~~-~~~~-lvs~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~------------------~----~~~~l~s~s 177 (557)
|.++.|. +++. +++++.|+++++||+.+++....+..|...+..+. + ++.++++|+
T Consensus 257 v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs 336 (393)
T 4gq1_A 257 LANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHS 336 (393)
T ss_dssp CSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEET
T ss_pred ceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEEC
Confidence 9999987 5655 78999999999999998877777666654443332 1 223567888
Q ss_pred CCCeEEEEECCCC---ceEeeCCccEEEEEEcCCCc-EEEEEcCCcEEEEecC
Q psy7057 178 EDQCVCVYQNKAQ---NSFMIPAMSVWAVAILPNSD-IVTGSSDGIVRVFSAN 226 (557)
Q Consensus 178 ~Dg~I~iwd~~~~---~~~~~~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~ 226 (557)
.|++|++||..+. ..+..|..+|++++|+|+|+ |++++.+| +.+|.+.
T Consensus 337 ~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA~as~~G-v~lvrL~ 388 (393)
T 4gq1_A 337 QHGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIATEGS-VLLTRLM 388 (393)
T ss_dssp TTTEEEEEETTCTTCCEEEEECSSCEEEEEECTTSSEEEEEESSE-EEEEEEG
T ss_pred CCCEEEEEECCCCcEEEEecCCCCcEEEEEEcCCCCEEEEEeCCC-eEEEEEe
Confidence 9999999997654 55667888999999999999 66666555 6666553
No 121
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.93 E-value=3.7e-24 Score=226.90 Aligned_cols=218 Identities=18% Similarity=0.180 Sum_probs=180.7
Q ss_pred eccCcccEEEEEEcCCCc-E-EEEECCCcEEEEcCC--C------------------CCCCCCCCEEEEEECCCeEEEEE
Q psy7057 8 LYGHSMDVRSLSVTPDGC-I-LSASRDKSAKLWKPN--D------------------LSPGAKVNTLLSASWDMTAKLWC 65 (557)
Q Consensus 8 l~gH~~~V~~l~~spdg~-l-~sgs~Dg~V~iWd~~--~------------------~~~~~~~~~l~sgs~Dg~i~iwd 65 (557)
+.+|.+.|++++|+|+++ | ++|+.||+|++||+. + +.+++++.+|++|+.++.+++|+
T Consensus 98 ~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~ 177 (450)
T 2vdu_B 98 APPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSID 177 (450)
T ss_dssp --CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred CCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEe
Confidence 356888999999999998 5 788899999999988 3 56788899999999999999999
Q ss_pred CCCCeEEE----EEcccCCcEEEEEEcCC---C-EEEEEECCCeEEEEe-CCCcEEEE-EeCCCCCEEEEEEeCCCe-EE
Q psy7057 66 LESQQCKL----TIRQHEMAVWGVIQLAN---G-IIVTGCADKTIKLHS-EEGEFLKT-LTGHTDCVRGLAVLNDTD-FV 134 (557)
Q Consensus 66 ~~~~~~~~----~l~~h~~~V~~l~~~~~---~-~l~sgs~dg~I~vwd-~~~~~~~~-l~~h~~~V~~l~~~~~~~-lv 134 (557)
+.+++... .+.+|...|.+++|+|+ + .|++|+.|++|++|| .++.++.. +.+|...|++++|+ ++. |+
T Consensus 178 ~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~ 256 (450)
T 2vdu_B 178 INSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDYLLL 256 (450)
T ss_dssp TTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC-STTEEE
T ss_pred cCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEEC-CCCEEE
Confidence 98876443 67889999999999999 8 999999999999999 45666766 56899999999999 765 77
Q ss_pred EEECCCeEEEEECCCCeEEEEEeCC-------------------------CCcEEEEEE--cCCEEEEEe-CCCeEEEEE
Q psy7057 135 SCSNDASIRVWDSTTGKCVHTMYGH-------------------------PNFIYSVAA--HGDLITSGG-EDQCVCVYQ 186 (557)
Q Consensus 135 s~s~Dg~I~vwd~~~~~~~~~~~~h-------------------------~~~V~~l~~--~~~~l~s~s-~Dg~I~iwd 186 (557)
+++.|++|++||+++++++..+..+ ...|.++++ ++++|++++ .|+.|++|+
T Consensus 257 s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~ 336 (450)
T 2vdu_B 257 SAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILE 336 (450)
T ss_dssp EEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEE
T ss_pred EEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEE
Confidence 9999999999999999999888632 356888888 678899888 899999999
Q ss_pred C--CCC------ceEeeCCccEEEEEEcCCCcEEEEEc-------CCcEEEEecCC
Q psy7057 187 N--KAQ------NSFMIPAMSVWAVAILPNSDIVTGSS-------DGIVRVFSANP 227 (557)
Q Consensus 187 ~--~~~------~~~~~~~~~v~~v~~~p~g~l~sg~~-------Dg~I~iwd~~~ 227 (557)
+ ... ..+..+ ..|++++|+|++.+++.+. +..|++|.++.
T Consensus 337 ~~~~~~~~l~~~~~~~~~-~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~~ 391 (450)
T 2vdu_B 337 MSEKQKGDLALKQIITFP-YNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYNL 391 (450)
T ss_dssp ECSSSTTCEEEEEEEECS-SCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEET
T ss_pred eccCCCCceeeccEeccC-CceEEEEecCCcEEEEEecccCCCCCCcceEEEEEEc
Confidence 8 322 344555 7899999999655555443 45588887653
No 122
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.92 E-value=1.6e-23 Score=213.39 Aligned_cols=229 Identities=18% Similarity=0.223 Sum_probs=183.7
Q ss_pred CCCCCC---CCEEEEEECCCeEEEEECCC-CeEE-EEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeCCCcEEEEEe
Q psy7057 43 LSPGAK---VNTLLSASWDMTAKLWCLES-QQCK-LTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSEEGEFLKTLT 116 (557)
Q Consensus 43 ~~~~~~---~~~l~sgs~Dg~i~iwd~~~-~~~~-~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~~~~~~~l~ 116 (557)
++++++ +.+|++|+.|+.|++|++.+ +..+ ..+.+|...|.+++|+|++ .|++++.|+.|++||........+.
T Consensus 45 ~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~ 124 (368)
T 3mmy_A 45 LSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQIA 124 (368)
T ss_dssp EEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred EEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCceeec
Confidence 667777 59999999999999999987 5544 7888999999999999988 9999999999999997666666677
Q ss_pred CCCCCEEEEEE--eCCCe-EEEEECCCeEEEEECCCCeEEEEEeCCCCcEEEEEEcCCEEEEEeCCCeEEEEECCCC-ce
Q psy7057 117 GHTDCVRGLAV--LNDTD-FVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAAHGDLITSGGEDQCVCVYQNKAQ-NS 192 (557)
Q Consensus 117 ~h~~~V~~l~~--~~~~~-lvs~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~l~s~s~Dg~I~iwd~~~~-~~ 192 (557)
.|...|++++| ++++. |++++.|+.|++||+++++++..+..|. .+.++.+.+..+++++.++.+++|++... ..
T Consensus 125 ~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 203 (368)
T 3mmy_A 125 QHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPE-RCYCADVIYPMAVVATAERGLIVYQLENQPSE 203 (368)
T ss_dssp ECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSS-CEEEEEEETTEEEEEEGGGCEEEEECSSSCEE
T ss_pred cccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCC-CceEEEecCCeeEEEeCCCcEEEEEeccccch
Confidence 89999999999 78876 7799999999999999999998888664 67788888889999999999999998765 22
Q ss_pred Ee----eCCccEEEEEEcCCCc-----EEEEEcCCcEEEEecCCCCc-chhHHHhcccc------------eeEEEeccC
Q psy7057 193 FM----IPAMSVWAVAILPNSD-----IVTGSSDGIVRVFSANPDRQ-AEDAVQAQYAE------------EVKKLKSAN 250 (557)
Q Consensus 193 ~~----~~~~~v~~v~~~p~g~-----l~sg~~Dg~I~iwd~~~~~~-~~~~~~~~~~~------------~v~~l~~~~ 250 (557)
+. .+...+.++++.++.. +++++.||.|++|+++.... ........+.. .+..+.+.+
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp 283 (368)
T 3mmy_A 204 FRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHP 283 (368)
T ss_dssp EEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECT
T ss_pred hhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEec
Confidence 21 1234556666655432 89999999999999987643 11112222322 588888877
Q ss_pred CCceeEEEEeCCCcEEEEecCCC
Q psy7057 251 EQEIGGVKVSDDGIVRVFSANPD 273 (557)
Q Consensus 251 ~~~~~~vs~s~DG~IrvW~~~~~ 273 (557)
.. ..+++++.||.|++|++...
T Consensus 284 ~~-~~l~s~~~dg~i~iwd~~~~ 305 (368)
T 3mmy_A 284 VH-GTLATVGSDGRFSFWDKDAR 305 (368)
T ss_dssp TT-CCEEEEETTSCEEEEETTTT
T ss_pred CC-CEEEEEccCCeEEEEECCCC
Confidence 55 46899999999999998754
No 123
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.92 E-value=3.7e-24 Score=218.47 Aligned_cols=224 Identities=12% Similarity=0.031 Sum_probs=172.7
Q ss_pred CCCCCCCEEEEEECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCCCEEEEEECCCeEEEEeCCC----------cEEE
Q psy7057 44 SPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHSEEG----------EFLK 113 (557)
Q Consensus 44 ~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~~l~sgs~dg~I~vwd~~~----------~~~~ 113 (557)
+...++..|++|+.||+|++||+.+++.+..+. ...|.++.++|. +++++.|++|++|+..+ ..+.
T Consensus 43 ~~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~--~~~v~~~~~~~~--~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~ 118 (343)
T 3lrv_A 43 SMYYDKWVCMCRCEDGALHFTQLKDSKTITTIT--TPNPRTGGEHPA--IISRGPCNRLLLLYPGNQITILDSKTNKVLR 118 (343)
T ss_dssp SSSEEEEEEEEEEETTEEEEEEESSSSCEEEEE--EECCCTTCCCCS--EEEECSTTEEEEEETTTEEEEEETTTCCEEE
T ss_pred hhcCCCCEEEEECCCCcEEEEECCCCcEEEEEe--cCCceeeeeCCc--eEEecCCCeEEEEEccCceEEeecCCcceeE
Confidence 344467899999999999999999998887776 456777888888 99999999999997443 3344
Q ss_pred EEe-CCCCCEEEEEEeC--CCe-EEEEECCCeEEEEECCCCeEEEEEeC-CCCcEEEEEE--cCCEEEEEeCCCeEEEEE
Q psy7057 114 TLT-GHTDCVRGLAVLN--DTD-FVSCSNDASIRVWDSTTGKCVHTMYG-HPNFIYSVAA--HGDLITSGGEDQCVCVYQ 186 (557)
Q Consensus 114 ~l~-~h~~~V~~l~~~~--~~~-lvs~s~Dg~I~vwd~~~~~~~~~~~~-h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd 186 (557)
.+. +|...|.+++++| ++. +++++.|++|++||+++++++..+.. |...+.+++| ++.+|++|+.|+.|++||
T Consensus 119 ~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd 198 (343)
T 3lrv_A 119 EIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYN 198 (343)
T ss_dssp EEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEE
T ss_pred EeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEE
Confidence 444 6778999999999 766 77999999999999999999777744 5568999999 678999999999999999
Q ss_pred CCCC----ceEee-CCccEEEEEEcCCCc-EEEEEcCCcEEEEecCCCCcchhHH-Hhccccee--EEEeccCCCceeEE
Q psy7057 187 NKAQ----NSFMI-PAMSVWAVAILPNSD-IVTGSSDGIVRVFSANPDRQAEDAV-QAQYAEEV--KKLKSANEQEIGGV 257 (557)
Q Consensus 187 ~~~~----~~~~~-~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~~~~~~~-~~~~~~~v--~~l~~~~~~~~~~v 257 (557)
+++. ..+.. |...|.+++|+|++. |++++ |+.|++||++......... ...+...+ ..+.+.+... .++
T Consensus 199 ~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~l~ 276 (343)
T 3lrv_A 199 LSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGK-NMI 276 (343)
T ss_dssp SSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSS-EEE
T ss_pred CCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecccccccccccceEEEECCCCC-EEE
Confidence 8765 24566 889999999999999 77777 5599999998765432111 00111122 2466665544 567
Q ss_pred EEeC-CCcEEEEecCCC
Q psy7057 258 KVSD-DGIVRVFSANPD 273 (557)
Q Consensus 258 s~s~-DG~IrvW~~~~~ 273 (557)
+++. |+.|+||+++..
T Consensus 277 ~~s~~d~~i~v~~~~~~ 293 (343)
T 3lrv_A 277 AYSNESNSLTIYKFDKK 293 (343)
T ss_dssp EEETTTTEEEEEEECTT
T ss_pred EecCCCCcEEEEEEccc
Confidence 7777 999999998654
No 124
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.92 E-value=8.9e-23 Score=211.11 Aligned_cols=244 Identities=12% Similarity=0.122 Sum_probs=193.1
Q ss_pred EEEEECCCcEEEEcCCC---------------CCCCCCCCEE-EEEECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcC
Q psy7057 26 ILSASRDKSAKLWKPND---------------LSPGAKVNTL-LSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLA 89 (557)
Q Consensus 26 l~sgs~Dg~V~iWd~~~---------------~~~~~~~~~l-~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~ 89 (557)
+++++.|++|++||+.+ +.+++++..| ++++.|++|++||+.+++.+..+..+. .+.+++|+|
T Consensus 5 ~vs~~~d~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~~~sp 83 (391)
T 1l0q_A 5 YIANSESDNISVIDVTSNKVTATIPVGSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVAVSP 83 (391)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEEECT
T ss_pred EEEcCCCCEEEEEECCCCeEEEEeecCCCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-CccceEECC
Confidence 67889999999999876 5777888876 667799999999999999988887665 899999999
Q ss_pred CC-EE-EEEECCCeEEEEeC-CCcEEEEEeCCCCCEEEEEEeCCCe-E-EEEECCCeEEEEECCCCeEEEEEeCCCCcEE
Q psy7057 90 NG-II-VTGCADKTIKLHSE-EGEFLKTLTGHTDCVRGLAVLNDTD-F-VSCSNDASIRVWDSTTGKCVHTMYGHPNFIY 164 (557)
Q Consensus 90 ~~-~l-~sgs~dg~I~vwd~-~~~~~~~l~~h~~~V~~l~~~~~~~-l-vs~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~ 164 (557)
++ .| ++++.++.|++||. +++.+..+.. ...+.+++|+|++. + ++++.|+.|++||+.+++.+..+..| ..+.
T Consensus 84 dg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~ 161 (391)
T 1l0q_A 84 DGKQVYVTNMASSTLSVIDTTSNTVAGTVKT-GKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVG-RSPK 161 (391)
T ss_dssp TSSEEEEEETTTTEEEEEETTTTEEEEEEEC-SSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECC-SSEE
T ss_pred CCCEEEEEECCCCEEEEEECCCCeEEEEEeC-CCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecC-CCcc
Confidence 88 45 55567799999995 4555666654 45789999999976 4 58888999999999999999888765 4568
Q ss_pred EEEE--cCCEE-EEEeCCCeEEEEECCCCc--eEeeCCccEEEEEEcCCCc-EEEEE---cCCcEEEEecCCCCcchhHH
Q psy7057 165 SVAA--HGDLI-TSGGEDQCVCVYQNKAQN--SFMIPAMSVWAVAILPNSD-IVTGS---SDGIVRVFSANPDRQAEDAV 235 (557)
Q Consensus 165 ~l~~--~~~~l-~s~s~Dg~I~iwd~~~~~--~~~~~~~~v~~v~~~p~g~-l~sg~---~Dg~I~iwd~~~~~~~~~~~ 235 (557)
++++ +++.+ ++++.++.|++||+++.. ....+...+.+++|+|+++ +++++ .++.|++||+.+.+......
T Consensus 162 ~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~ 241 (391)
T 1l0q_A 162 GIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIP 241 (391)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEE
T ss_pred eEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEecCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEe
Confidence 8888 56666 677889999999987762 2334556889999999998 66666 68999999998775443221
Q ss_pred HhcccceeEEEeccCCCceeEEEEeCCCcEEEEecCCChh
Q psy7057 236 QAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPDRQ 275 (557)
Q Consensus 236 ~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~~~~ 275 (557)
. ...+..+.+.+.....+++++.|+.|++|++..++.
T Consensus 242 --~-~~~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~ 278 (391)
T 1l0q_A 242 --V-GPDPAGIAVTPDGKKVYVALSFXNTVSVIDTATNTI 278 (391)
T ss_dssp --C-CSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEE
T ss_pred --c-CCCccEEEEccCCCEEEEEcCCCCEEEEEECCCCcE
Confidence 1 223566777777776668889999999999887543
No 125
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.92 E-value=2.1e-23 Score=219.89 Aligned_cols=204 Identities=22% Similarity=0.272 Sum_probs=160.1
Q ss_pred EEEeccCcccEEEEEEcCCCc--EEEEECCCcEEEEcCCCCCCCCCCCEEEEEECCCeEEEEECCCCeEEEEEcccCCcE
Q psy7057 5 STALYGHSMDVRSLSVTPDGC--ILSASRDKSAKLWKPNDLSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAV 82 (557)
Q Consensus 5 ~~~l~gH~~~V~~l~~spdg~--l~sgs~Dg~V~iWd~~~~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V 82 (557)
...+.+|...|++|+|+|++. |++|+.||+|++|++..-... ... ......+.+|...|
T Consensus 174 ~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~-----------~~~--------~~~~~~~~~h~~~v 234 (430)
T 2xyi_A 174 DLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKE-----------HRV--------IDAKNIFTGHTAVV 234 (430)
T ss_dssp SEEEECCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBG-----------GGE--------EECSEEECCCSSCE
T ss_pred cEEecCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCC-----------Cce--------eccceeecCCCCCE
Confidence 456778888888888888754 455555555555555421000 000 01235677899999
Q ss_pred EEEEEcC-CC-EEEEEECCCeEEEEeCC-C---cEEEEEeCCCCCEEEEEEeCCCe--EEEEECCCeEEEEECCC-CeEE
Q psy7057 83 WGVIQLA-NG-IIVTGCADKTIKLHSEE-G---EFLKTLTGHTDCVRGLAVLNDTD--FVSCSNDASIRVWDSTT-GKCV 153 (557)
Q Consensus 83 ~~l~~~~-~~-~l~sgs~dg~I~vwd~~-~---~~~~~l~~h~~~V~~l~~~~~~~--lvs~s~Dg~I~vwd~~~-~~~~ 153 (557)
.+++|+| ++ .|++++.|+.|++||.. + .++..+..|...|++++|+|++. |++|+.|++|++||+++ ..++
T Consensus 235 ~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~ 314 (430)
T 2xyi_A 235 EDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKL 314 (430)
T ss_dssp EEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCS
T ss_pred eeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCe
Confidence 9999999 44 89999999999999954 3 46778889999999999999864 77999999999999998 5678
Q ss_pred EEEeCCCCcEEEEEE--cC-CEEEEEeCCCeEEEEECCC---------------C--ceEeeCCccEEEEEEcCCCc--E
Q psy7057 154 HTMYGHPNFIYSVAA--HG-DLITSGGEDQCVCVYQNKA---------------Q--NSFMIPAMSVWAVAILPNSD--I 211 (557)
Q Consensus 154 ~~~~~h~~~V~~l~~--~~-~~l~s~s~Dg~I~iwd~~~---------------~--~~~~~~~~~v~~v~~~p~g~--l 211 (557)
..+..|...|.+++| ++ .+|++++.|+.|++||+.. . ..+..|...|++++|+|++. +
T Consensus 315 ~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l 394 (430)
T 2xyi_A 315 HSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWII 394 (430)
T ss_dssp EEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEE
T ss_pred EEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEE
Confidence 899999999999999 44 4799999999999999654 1 23345777899999999987 7
Q ss_pred EEEEcCCcEEEEecCC
Q psy7057 212 VTGSSDGIVRVFSANP 227 (557)
Q Consensus 212 ~sg~~Dg~I~iwd~~~ 227 (557)
++++.||.|+||++..
T Consensus 395 ~s~s~dg~i~iw~~~~ 410 (430)
T 2xyi_A 395 CSVSEDNIMQVWQMAE 410 (430)
T ss_dssp EEEETTSEEEEEEECH
T ss_pred EEEECCCCEEEeEccc
Confidence 7899999999999874
No 126
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.91 E-value=1.4e-21 Score=201.98 Aligned_cols=224 Identities=16% Similarity=0.187 Sum_probs=181.6
Q ss_pred EEEEEeccCcccEEEEEEcCCCc-E-EEEECCCcEEEEcCCC---------------CCCCCCCCEEEEE-ECCCeEEEE
Q psy7057 3 KLSTALYGHSMDVRSLSVTPDGC-I-LSASRDKSAKLWKPND---------------LSPGAKVNTLLSA-SWDMTAKLW 64 (557)
Q Consensus 3 kl~~~l~gH~~~V~~l~~spdg~-l-~sgs~Dg~V~iWd~~~---------------~~~~~~~~~l~sg-s~Dg~i~iw 64 (557)
++.+.+.+|. .+.+++|+|+++ | ++++.|++|++||+.+ +.+++++++|+.+ +.++.|++|
T Consensus 23 ~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~v~v~ 101 (391)
T 1l0q_A 23 KVTATIPVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSSPQGVAVSPDGKQVYVTNMASSTLSVI 101 (391)
T ss_dssp EEEEEEECSS-SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEE
T ss_pred eEEEEeecCC-CcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCCCccceEECCCCCEEEEEECCCCEEEEE
Confidence 5667777775 589999999998 5 5777999999999876 6678888887554 467999999
Q ss_pred ECCCCeEEEEEcccCCcEEEEEEcCCC-EE-EEEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeCCCe-E-EEEECC
Q psy7057 65 CLESQQCKLTIRQHEMAVWGVIQLANG-II-VTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDTD-F-VSCSND 139 (557)
Q Consensus 65 d~~~~~~~~~l~~h~~~V~~l~~~~~~-~l-~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~~~~-l-vs~s~D 139 (557)
|+.+++.+..+..| ..+.+++|+|++ .+ ++++.++.|++|| .+++.+..+..| ..+.+++|+|++. + ++++.+
T Consensus 102 d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~~~dg~~l~~~~~~~ 179 (391)
T 1l0q_A 102 DTTSNTVAGTVKTG-KSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVG-RSPKGIAVTPDGTKVYVANFDS 179 (391)
T ss_dssp ETTTTEEEEEEECS-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECC-SSEEEEEECTTSSEEEEEETTT
T ss_pred ECCCCeEEEEEeCC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecC-CCcceEEECCCCCEEEEEeCCC
Confidence 99999988888754 468999999988 45 7888899999999 456677777655 5579999999976 4 477889
Q ss_pred CeEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEe---CCCeEEEEECCCC---ceEeeCCccEEEEEEcCCCc-
Q psy7057 140 ASIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGG---EDQCVCVYQNKAQ---NSFMIPAMSVWAVAILPNSD- 210 (557)
Q Consensus 140 g~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s---~Dg~I~iwd~~~~---~~~~~~~~~v~~v~~~p~g~- 210 (557)
+.|++||+++++++..+. +...+.++++ ++++|++++ .++.|++||+.+. ..+..+ ..+.+++|+|+++
T Consensus 180 ~~v~~~d~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~ 257 (391)
T 1l0q_A 180 MSISVIDTVTNSVIDTVK-VEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVG-PDPAGIAVTPDGKK 257 (391)
T ss_dssp TEEEEEETTTTEEEEEEE-CSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEECC-SSEEEEEECTTSSE
T ss_pred CEEEEEECCCCeEEEEEe-cCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEecC-CCccEEEEccCCCE
Confidence 999999999999888776 5667889998 677888777 6899999998766 333333 4688999999998
Q ss_pred E-EEEEcCCcEEEEecCCCCcc
Q psy7057 211 I-VTGSSDGIVRVFSANPDRQA 231 (557)
Q Consensus 211 l-~sg~~Dg~I~iwd~~~~~~~ 231 (557)
+ ++++.|+.|++||+.+++..
T Consensus 258 l~~s~~~d~~v~v~d~~~~~~~ 279 (391)
T 1l0q_A 258 VYVALSFXNTVSVIDTATNTIT 279 (391)
T ss_dssp EEEEETTTTEEEEEETTTTEEE
T ss_pred EEEEcCCCCEEEEEECCCCcEE
Confidence 5 56778999999999876543
No 127
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.89 E-value=4.3e-21 Score=192.58 Aligned_cols=168 Identities=13% Similarity=0.060 Sum_probs=122.2
Q ss_pred CCCeEEEEe--CCCcEEEEEeCCCCCEEEEEEeC---CCe-EEEEECCCeEEEEECCCCeEEEEEeCCCC---cEEEEEE
Q psy7057 98 ADKTIKLHS--EEGEFLKTLTGHTDCVRGLAVLN---DTD-FVSCSNDASIRVWDSTTGKCVHTMYGHPN---FIYSVAA 168 (557)
Q Consensus 98 ~dg~I~vwd--~~~~~~~~l~~h~~~V~~l~~~~---~~~-lvs~s~Dg~I~vwd~~~~~~~~~~~~h~~---~V~~l~~ 168 (557)
.|+.|++|+ .+++.+..+.+|...++.++|++ ++. |+++|.|++|+|||+.++++++++.+|.. .+.+++|
T Consensus 155 ~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vaf 234 (356)
T 2w18_A 155 SDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAY 234 (356)
T ss_dssp TTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEE
T ss_pred CCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEE
Confidence 399999999 45788888889999999999988 444 77999999999999999999999987543 5666666
Q ss_pred --cCCEE------------EEEeCCCeEEEEECCCCceEe--------eCCccEEEEEEcCCCc-EEEEEcCCcEEEEec
Q psy7057 169 --HGDLI------------TSGGEDQCVCVYQNKAQNSFM--------IPAMSVWAVAILPNSD-IVTGSSDGIVRVFSA 225 (557)
Q Consensus 169 --~~~~l------------~s~s~Dg~I~iwd~~~~~~~~--------~~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~ 225 (557)
++.++ ++|+.|++|++||..+.+.+. +|...+.+..++ +. +++++.|++|+|||+
T Consensus 235 SpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~s--g~~lASgS~DgTIkIWDl 312 (356)
T 2w18_A 235 SEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVK--DHCAAAILTSGTIAIWDL 312 (356)
T ss_dssp EETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEE--TTEEEEEETTSCEEEEET
T ss_pred CCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccccC--CCEEEEEcCCCcEEEEEC
Confidence 55554 678899999999987764332 233334333333 44 788899999999999
Q ss_pred CCCCcchhHHHhcccceeE-EEeccCCCceeEEEEeCCCcEEEEec
Q psy7057 226 NPDRQAEDAVQAQYAEEVK-KLKSANEQEIGGVKVSDDGIVRVFSA 270 (557)
Q Consensus 226 ~~~~~~~~~~~~~~~~~v~-~l~~~~~~~~~~vs~s~DG~IrvW~~ 270 (557)
.+++.... +.+|...+. .+.+.++.. .+++||.|++||||++
T Consensus 313 ~tGk~l~t--L~gH~~~vvs~vafSPDG~-~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 313 LLGQCTAL--LPPVSDQHWSFVKWSGTDS-HLLAGQKDGNIFVYHY 355 (356)
T ss_dssp TTCSEEEE--ECCC--CCCCEEEECSSSS-EEEEECTTSCEEEEEE
T ss_pred CCCcEEEE--ecCCCCCeEEEEEECCCCC-EEEEEECCCcEEEecC
Confidence 98876533 233444443 466766544 6899999999999985
No 128
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.89 E-value=5.2e-21 Score=200.60 Aligned_cols=219 Identities=12% Similarity=0.071 Sum_probs=177.3
Q ss_pred EeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC----------------CCCCCCCCEEEEE-ECCCeEEEEECCC
Q psy7057 7 ALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND----------------LSPGAKVNTLLSA-SWDMTAKLWCLES 68 (557)
Q Consensus 7 ~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~----------------~~~~~~~~~l~sg-s~Dg~i~iwd~~~ 68 (557)
.+.+|.+.|.+++|+|+++ +++++.|+.|++||+.+ +.+++++..++++ +.|+.|++||+.+
T Consensus 164 ~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~ 243 (433)
T 3bws_A 164 KYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKT 243 (433)
T ss_dssp HHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTT
T ss_pred cccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCC
Confidence 3568999999999999998 77999999999999876 5667788888554 4799999999999
Q ss_pred CeEEEEEcccCCcEEEEEEcCCC-EEEEEE--------CCCeEEEEeCCCcEEEEEeCCCCCEEEEEEeCCCe--EEEEE
Q psy7057 69 QQCKLTIRQHEMAVWGVIQLANG-IIVTGC--------ADKTIKLHSEEGEFLKTLTGHTDCVRGLAVLNDTD--FVSCS 137 (557)
Q Consensus 69 ~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs--------~dg~I~vwd~~~~~~~~l~~h~~~V~~l~~~~~~~--lvs~s 137 (557)
++.+..+..+ ..+.+++|+|++ .+++++ .|+.|++||...........|...+.+++|+|++. +++++
T Consensus 244 ~~~~~~~~~~-~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~ 322 (433)
T 3bws_A 244 KLEIRKTDKI-GLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPGNKRHIVSGNTENKIYVSDM 322 (433)
T ss_dssp TEEEEECCCC-SEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEECEEEEEECSSTTEEEEEET
T ss_pred CcEEEEecCC-CCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCCCcceEEECCCCCEEEEEec
Confidence 9988877754 468999999998 777777 58899999954433333345667899999999974 45778
Q ss_pred CCCeEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeC---------------CCeEEEEECCCCceE--eeCCc
Q psy7057 138 NDASIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGE---------------DQCVCVYQNKAQNSF--MIPAM 198 (557)
Q Consensus 138 ~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~---------------Dg~I~iwd~~~~~~~--~~~~~ 198 (557)
.|+.|++||+.+++.+..+. +...+.++++ +++.+++++. ||.|++||..+...+ .....
T Consensus 323 ~~~~v~v~d~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~~~ 401 (433)
T 3bws_A 323 CCSKIEVYDLKEKKVQKSIP-VFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEAGN 401 (433)
T ss_dssp TTTEEEEEETTTTEEEEEEE-CSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEECSS
T ss_pred CCCEEEEEECCCCcEEEEec-CCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecCCC
Confidence 99999999999999888876 7788999999 5777887776 579999998776222 22345
Q ss_pred cEEEEEEcCCCc-EEEEEc-CCcEEEEecCC
Q psy7057 199 SVWAVAILPNSD-IVTGSS-DGIVRVFSANP 227 (557)
Q Consensus 199 ~v~~v~~~p~g~-l~sg~~-Dg~I~iwd~~~ 227 (557)
.+.+++|+|+++ +++++. |+.|++|+++.
T Consensus 402 ~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 402 QPTGLDVSPDNRYLVISDFLDHQIRVYRRDG 432 (433)
T ss_dssp SEEEEEECTTSCEEEEEETTTTEEEEEEETT
T ss_pred CCceEEEcCCCCEEEEEECCCCeEEEEEecC
Confidence 799999999998 666665 99999999863
No 129
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.89 E-value=1.2e-21 Score=201.24 Aligned_cols=221 Identities=13% Similarity=0.093 Sum_probs=170.3
Q ss_pred CCCCCCCCEEEEEECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCCC--EEEEEECCCeEEEEe-CCCcEEEEEeCCC
Q psy7057 43 LSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG--IIVTGCADKTIKLHS-EEGEFLKTLTGHT 119 (557)
Q Consensus 43 ~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~--~l~sgs~dg~I~vwd-~~~~~~~~l~~h~ 119 (557)
+++++++.+|++|+.++ +++|++.+++.......+ .+..+.+.+++ .+++|+.|++|++|| .+++++..+. |.
T Consensus 25 v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~~~~~~-~~ 100 (355)
T 3vu4_A 25 YEFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQEMR--HLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQDVSRIK-VD 100 (355)
T ss_dssp EEECTTSSEEEEECSSE-EEEEEETTEEEEEEEECS--CCCEEEECTTSSEEEEECSSTTEEEEEETTTTEEEEEEE-CS
T ss_pred EEECCCCCEEEEEcCCE-EEEEecCCcceeeeeecC--CeEEEEEcCCCCEEEEEECCccEEEEEECCCCcEEEEEE-CC
Confidence 56788899999988775 789999887766554433 46667777765 557788899999999 5677777776 67
Q ss_pred CCEEEEEEeCCCeEEEEECCCeEEEEECCCC-eEEEEEeCCCCcEEEEEEcCCEEEE--EeCCCeEEEEECCC-------
Q psy7057 120 DCVRGLAVLNDTDFVSCSNDASIRVWDSTTG-KCVHTMYGHPNFIYSVAAHGDLITS--GGEDQCVCVYQNKA------- 189 (557)
Q Consensus 120 ~~V~~l~~~~~~~lvs~s~Dg~I~vwd~~~~-~~~~~~~~h~~~V~~l~~~~~~l~s--~s~Dg~I~iwd~~~------- 189 (557)
..|.+++++++..++ + .|+.|++||+.++ +.+.++.. ....+++....++. |+.||.|++||+..
T Consensus 101 ~~v~~v~~~~~~~~~-~-~~~~i~i~d~~~~~~~~~~~~~---~~~~~~~s~~~la~~sg~~~g~v~iwd~~~~~~~~~~ 175 (355)
T 3vu4_A 101 APVKDLFLSREFIVV-S-YGDVISVFKFGNPWKRITDDIR---FGGVCEFSNGLLVYSNEFNLGQIHITKLQSSGSATTQ 175 (355)
T ss_dssp SCEEEEEECSSEEEE-E-ETTEEEEEESSTTCCBSSCCEE---EEEEEEEETTEEEEEESSCTTCEEEEECCC-------
T ss_pred CceEEEEEcCCEEEE-E-EcCEEEEEECCCCceeeEEecc---CCceEEEEccEEEEeCCCcCcEEEEEECCCCCccccc
Confidence 799999998765333 3 4789999999987 66655554 22233334466666 57999999999775
Q ss_pred ------------CceEeeCCccEEEEEEcCCCc-EEEEEcCCc-EEEEecCCCCcchhHHHhcccceeEEEeccCCCcee
Q psy7057 190 ------------QNSFMIPAMSVWAVAILPNSD-IVTGSSDGI-VRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIG 255 (557)
Q Consensus 190 ------------~~~~~~~~~~v~~v~~~p~g~-l~sg~~Dg~-I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~ 255 (557)
...+..|...|++++|+|++. |++|+.|++ |++||+.+++.........|...+..+.+.+... .
T Consensus 176 ~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~-~ 254 (355)
T 3vu4_A 176 DQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGS-K 254 (355)
T ss_dssp -----------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSC-E
T ss_pred cccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCC-E
Confidence 456778999999999999998 899999998 9999999877654332122778899999887655 5
Q ss_pred EEEEeCCCcEEEEecCCC
Q psy7057 256 GVKVSDDGIVRVFSANPD 273 (557)
Q Consensus 256 ~vs~s~DG~IrvW~~~~~ 273 (557)
+++++.||+|+||++...
T Consensus 255 l~s~s~d~~v~iw~~~~~ 272 (355)
T 3vu4_A 255 LAVVSDKWTLHVFEIFND 272 (355)
T ss_dssp EEEEETTCEEEEEESSCC
T ss_pred EEEEECCCEEEEEEccCC
Confidence 899999999999998765
No 130
>2k89_A PLA2P, PLAP, phospholipase A-2-activating protein; ubiquitin binding, WD repeat, protein binding; NMR {Homo sapiens} PDB: 2k8a_A 2k8b_B 2k8c_B
Probab=99.88 E-value=2.1e-23 Score=158.73 Aligned_cols=70 Identities=56% Similarity=1.082 Sum_probs=66.6
Q ss_pred ccCCeeEecceeeeeEEEEecCCCCCcccCCCccCCChHHHHHHHHHHcCCChHHHHHHHHHHHhcCCCC
Q psy7057 359 ESSGKVLYQGKEYDFVFSVDIEEGKPPLKLPYNVSEDPWHAAQAFIHTHHLSQMFLEQVANFIMTNSKSK 428 (557)
Q Consensus 359 ~~~~~~~~~g~~~d~v~~v~~~~g~~~~~l~~n~~~~~~~~a~~~~~~~~l~~~~~~~v~~~i~~~~~~~ 428 (557)
++++|..++|++|||||+||+++|.+++|||||.++|||.+|++||++|+||++|++||++||.+|+++.
T Consensus 4 ~~~~k~~~~GkeYDyVFdVdi~dG~~~lkLpyN~~dnP~~aAqkFi~~n~Lp~~yldqI~~FI~~N~~~~ 73 (80)
T 2k89_A 4 QTSGKVLYEGKEFDYVFSIDVNEGGPSYKLPYNTSDDPWLTAYNFLQKNDLNPMFLDQVAKFIIDNTKGQ 73 (80)
T ss_dssp CSSSCEEETTEEESEEEEECCSSSCSCEEEEECTTSCHHHHHHHHHHHHTCCTTHHHHHHHHHHHHHSTT
T ss_pred cCCCceeecCccccEEEEEEcCCCCcccccCccCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCCc
Confidence 4578889999999999999999999999999999999999999999999999999999999999998754
No 131
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.86 E-value=1.6e-19 Score=196.01 Aligned_cols=270 Identities=14% Similarity=0.123 Sum_probs=205.5
Q ss_pred EEEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcC--CC---------------CCCCC----CCCEEEEEE-CCC
Q psy7057 3 KLSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKP--ND---------------LSPGA----KVNTLLSAS-WDM 59 (557)
Q Consensus 3 kl~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~--~~---------------~~~~~----~~~~l~sgs-~Dg 59 (557)
++..++..+.. +.+++|+|||+ |++++.|++|++||+ .+ +.+++ +++++++++ .++
T Consensus 170 ~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~g~~p~~va~sp~~~~dg~~l~v~~~~~~ 248 (543)
T 1nir_A 170 KIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPP 248 (543)
T ss_dssp CEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEESS
T ss_pred eEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEecCCCcceEEeCCCcCCCCCEEEEEEccCC
Confidence 56677773333 89999999998 889999999999999 54 67788 899999988 589
Q ss_pred eEEEEECCCCeEEEEEcc----------c-CCcEEEEEEcCCC--EEEEEECCCeEEEEeCC-CcEE--EEEeCCCCCEE
Q psy7057 60 TAKLWCLESQQCKLTIRQ----------H-EMAVWGVIQLANG--IIVTGCADKTIKLHSEE-GEFL--KTLTGHTDCVR 123 (557)
Q Consensus 60 ~i~iwd~~~~~~~~~l~~----------h-~~~V~~l~~~~~~--~l~sgs~dg~I~vwd~~-~~~~--~~l~~h~~~V~ 123 (557)
+|.+||..+++++.++.. | ...+.++.+++++ .+++...++.|.+||.. .+.+ ..+ .+...+.
T Consensus 249 ~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i-~~~~~~~ 327 (543)
T 1nir_A 249 QFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSI-GAAPFLH 327 (543)
T ss_dssp EEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEE-ECCSSCC
T ss_pred eEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEe-ccCcCcc
Confidence 999999999999888864 2 2378999999976 77888889999999943 2322 233 4667788
Q ss_pred EEEEeCCCe-EE-EEECCCeEEEEECCCCeEEEEEeC----CCCcEEEEEE-c-CCEEEEEe-CCCeEEEEECCC-----
Q psy7057 124 GLAVLNDTD-FV-SCSNDASIRVWDSTTGKCVHTMYG----HPNFIYSVAA-H-GDLITSGG-EDQCVCVYQNKA----- 189 (557)
Q Consensus 124 ~l~~~~~~~-lv-s~s~Dg~I~vwd~~~~~~~~~~~~----h~~~V~~l~~-~-~~~l~s~s-~Dg~I~iwd~~~----- 189 (557)
++.|+|+++ |+ ++..+++|.+||+.+++++.++.. |......+.. + +..++++. .|++|.+||..+
T Consensus 328 ~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~ 407 (543)
T 1nir_A 328 DGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQ 407 (543)
T ss_dssp CEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTT
T ss_pred CceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCcccCCCCCccEEEeccCCCceEEEEEeCCCCCch
Confidence 999999988 44 445689999999999999988874 6554444433 3 44566665 689999999765
Q ss_pred --C---ceEeeCCccEEEEEEcCCCc-EEEEE-------cCCcEEEEecCCCCcc-hhHHH------hcccceeEEEecc
Q psy7057 190 --Q---NSFMIPAMSVWAVAILPNSD-IVTGS-------SDGIVRVFSANPDRQA-EDAVQ------AQYAEEVKKLKSA 249 (557)
Q Consensus 190 --~---~~~~~~~~~v~~v~~~p~g~-l~sg~-------~Dg~I~iwd~~~~~~~-~~~~~------~~~~~~v~~l~~~ 249 (557)
. +++..+...+..++++|+++ |++++ .+++|.|||+.+.+.. ..... ..+...+..+.+.
T Consensus 408 ~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 487 (543)
T 1nir_A 408 YAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYN 487 (543)
T ss_dssp TBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEEC
T ss_pred hcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCceEeccCC
Confidence 3 66777877889999999999 66665 2789999999987654 21111 2234567777888
Q ss_pred CCCceeEEEE----eCCCcEEEEecCCCh
Q psy7057 250 NEQEIGGVKV----SDDGIVRVFSANPDR 274 (557)
Q Consensus 250 ~~~~~~~vs~----s~DG~IrvW~~~~~~ 274 (557)
+......++. +.|+.|.|||..+.+
T Consensus 488 ~~g~~~~~s~~~~~~~~~~i~v~D~~t~~ 516 (543)
T 1nir_A 488 KRGDEVWFSVWNGKNDSSALVVVDDKTLK 516 (543)
T ss_dssp SSSSEEEEEEECCTTSCCEEEEEETTTTE
T ss_pred CCCCEEEEEeecCCCCCCeEEEEECCCce
Confidence 8777666664 258999999987754
No 132
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.85 E-value=2.6e-19 Score=187.96 Aligned_cols=254 Identities=9% Similarity=0.039 Sum_probs=188.8
Q ss_pred cccEEEEEEcCCCc--EEEEE----CCC----cEEEEcC--CC------------------CCC--------------CC
Q psy7057 12 SMDVRSLSVTPDGC--ILSAS----RDK----SAKLWKP--ND------------------LSP--------------GA 47 (557)
Q Consensus 12 ~~~V~~l~~spdg~--l~sgs----~Dg----~V~iWd~--~~------------------~~~--------------~~ 47 (557)
...|...+|.+.|. +++|+ .+| +|++||+ .+ +++ ..
T Consensus 62 ~~~~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~ 141 (415)
T 2hqs_A 62 AQEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGA 141 (415)
T ss_dssp GGGCCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCCC
T ss_pred ccCcCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCCc
Confidence 34677778888886 55776 568 9999999 54 000 11
Q ss_pred CCCEEEEEECC------CeEEEEECCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCC---eEEEEeCCCcEEEEEeC
Q psy7057 48 KVNTLLSASWD------MTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADK---TIKLHSEEGEFLKTLTG 117 (557)
Q Consensus 48 ~~~~l~sgs~D------g~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg---~I~vwd~~~~~~~~l~~ 117 (557)
.+..++.++.+ ++|++||+.. .....+.+|...+.+++|+|++ .|++++.++ .|++||........+..
T Consensus 142 ~~~~l~~~s~~~~~~~~~~i~i~d~~g-~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~ 220 (415)
T 2hqs_A 142 FRTRIAYVVQTNGGQFPYELRVSDYDG-YNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVAS 220 (415)
T ss_dssp TTCEEEEEEECSSSSCCEEEEEEETTS-CSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEEC
T ss_pred CCCEEEEEEecCCCCccceEEEEcCCC-CCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEeec
Confidence 25677776654 7999999975 4567788899999999999999 899999885 99999965444456778
Q ss_pred CCCCEEEEEEeCCCe-EE-EEECCCe--EEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeC-CC--eEEEEECC
Q psy7057 118 HTDCVRGLAVLNDTD-FV-SCSNDAS--IRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGE-DQ--CVCVYQNK 188 (557)
Q Consensus 118 h~~~V~~l~~~~~~~-lv-s~s~Dg~--I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~-Dg--~I~iwd~~ 188 (557)
|...+.+++|+|+++ |+ +++.|+. |++||+.++++ ..+..|...+.+++| +++.|++++. ++ .|++||+.
T Consensus 221 ~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~ 299 (415)
T 2hqs_A 221 FPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNIN 299 (415)
T ss_dssp CSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETT
T ss_pred CCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE-EeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECC
Confidence 889999999999987 55 6666654 99999988876 567788899999999 7788887776 45 67778876
Q ss_pred CC--ceEeeCCccEEEEEEcCCCc-EEEEEcC---CcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCC
Q psy7057 189 AQ--NSFMIPAMSVWAVAILPNSD-IVTGSSD---GIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDD 262 (557)
Q Consensus 189 ~~--~~~~~~~~~v~~v~~~p~g~-l~sg~~D---g~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~D 262 (557)
.. ..+..+...+.+++|+|+|+ |++++.+ ..|++|++.++..... ..+ ..+..+.+.++... +++++.|
T Consensus 300 ~~~~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~~l---~~~-~~~~~~~~spdg~~-l~~~s~~ 374 (415)
T 2hqs_A 300 GGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVL---SST-FLDETPSLAPNGTM-VIYSSSQ 374 (415)
T ss_dssp SSCCEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEEEC---CCS-SSCEEEEECTTSSE-EEEEEEE
T ss_pred CCCEEEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEEEe---cCC-CCcCCeEEcCCCCE-EEEEEcC
Confidence 55 44455667889999999999 6666654 5899999987765322 112 25667777776664 5555555
Q ss_pred C---cEEEEecCC
Q psy7057 263 G---IVRVFSANP 272 (557)
Q Consensus 263 G---~IrvW~~~~ 272 (557)
+ .|++|+++.
T Consensus 375 ~~~~~l~~~d~~g 387 (415)
T 2hqs_A 375 GMGSVLNLVSTDG 387 (415)
T ss_dssp TTEEEEEEEETTS
T ss_pred CCccEEEEEECCC
Confidence 4 788888653
No 133
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.83 E-value=3.6e-19 Score=186.89 Aligned_cols=241 Identities=9% Similarity=0.018 Sum_probs=185.2
Q ss_pred EEeccCcccEEEEEEcC---------------CCcEEEEECC------CcEEEEcCCC---------------CCCCCCC
Q psy7057 6 TALYGHSMDVRSLSVTP---------------DGCILSASRD------KSAKLWKPND---------------LSPGAKV 49 (557)
Q Consensus 6 ~~l~gH~~~V~~l~~sp---------------dg~l~sgs~D------g~V~iWd~~~---------------~~~~~~~ 49 (557)
..+.+|...++.+++++ ..+++.++.+ ++|++||+.. ++++|++
T Consensus 111 ~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~g~~~~~l~~~~~~v~~~~~Spdg 190 (415)
T 2hqs_A 111 NSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYDGYNQFVVHRSPQPLMSPAWSPDG 190 (415)
T ss_dssp EEEEECGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEEEEETTSCSCEEEEEESSCEEEEEECTTS
T ss_pred eEEEcChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCCCCccceEEEEcCCCCCCEEEeCCCCcceeeEEcCCC
Confidence 55788888888887775 4457766554 7999999875 6788999
Q ss_pred CEEEEEECCC---eEEEEECCCCeEEEEEcccCCcEEEEEEcCCC-EEE-EEECCCe--EEEEeCCCcEEEEEeCCCCCE
Q psy7057 50 NTLLSASWDM---TAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIV-TGCADKT--IKLHSEEGEFLKTLTGHTDCV 122 (557)
Q Consensus 50 ~~l~sgs~Dg---~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~-sgs~dg~--I~vwd~~~~~~~~l~~h~~~V 122 (557)
+.|++++.++ .|++||+.++++. .+..|...+.+++|+|++ .|+ +++.++. |++||........+..|...+
T Consensus 191 ~~la~~s~~~~~~~i~~~d~~tg~~~-~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~~l~~~~~~~ 269 (415)
T 2hqs_A 191 SKLAYVTFESGRSALVIQTLANGAVR-QVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNN 269 (415)
T ss_dssp SEEEEEECTTSSCEEEEEETTTCCEE-EEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEECCCCSSCE
T ss_pred CEEEEEEecCCCcEEEEEECCCCcEE-EeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEEeCcCCCCcc
Confidence 9999999885 9999999998775 566788899999999999 565 6666655 899997655567888899999
Q ss_pred EEEEEeCCCe-EEEEEC-CC--eEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCC---CeEEEEECCCC--c
Q psy7057 123 RGLAVLNDTD-FVSCSN-DA--SIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGED---QCVCVYQNKAQ--N 191 (557)
Q Consensus 123 ~~l~~~~~~~-lvs~s~-Dg--~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~D---g~I~iwd~~~~--~ 191 (557)
.+++|+|+++ |++++. ++ .|.+||+.+++. ..+..|...+.+++| ++++|++++.+ ..|++||+.+. .
T Consensus 270 ~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~ 348 (415)
T 2hqs_A 270 TEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAP-QRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ 348 (415)
T ss_dssp EEEEECTTSSEEEEEECTTSSCEEEEEETTSSCC-EECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEE
T ss_pred cceEECCCCCEEEEEECCCCCcEEEEEECCCCCE-EEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEE
Confidence 9999999987 666665 44 688889887764 445567788888998 77888877754 58999998765 3
Q ss_pred eEeeCCccEEEEEEcCCCc-EEEEEcCC---cEEEEecCCCCcchhHHHhcccceeEEEeccCCC
Q psy7057 192 SFMIPAMSVWAVAILPNSD-IVTGSSDG---IVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQ 252 (557)
Q Consensus 192 ~~~~~~~~v~~v~~~p~g~-l~sg~~Dg---~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~ 252 (557)
.+..+. .+.+++|+|+|+ |++++.++ .|++|++...... .+..+.+.+..+.+.+..
T Consensus 349 ~l~~~~-~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~~~~---~l~~~~~~v~~~~~~~~~ 409 (415)
T 2hqs_A 349 VLSSTF-LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKA---RLPATDGQVKFPAWSPYL 409 (415)
T ss_dssp ECCCSS-SCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCCEE---ECCCSSSEEEEEEECCCC
T ss_pred EecCCC-CcCCeEEcCCCCEEEEEEcCCCccEEEEEECCCCcEE---EeeCCCCCCcCCcccccc
Confidence 344443 799999999999 77777766 7999998755432 233455677777776543
No 134
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.78 E-value=1.1e-17 Score=188.10 Aligned_cols=257 Identities=9% Similarity=0.030 Sum_probs=186.3
Q ss_pred cccEEEEEEcCCCc-EEEEEC-CC-----cEEEEcCCC----------------------------------------CC
Q psy7057 12 SMDVRSLSVTPDGC-ILSASR-DK-----SAKLWKPND----------------------------------------LS 44 (557)
Q Consensus 12 ~~~V~~l~~spdg~-l~sgs~-Dg-----~V~iWd~~~----------------------------------------~~ 44 (557)
...|.+++|+|||+ |++++. |+ +|++||+.+ ++
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ 115 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence 45799999999998 888888 88 899998754 23
Q ss_pred CCCCCCEEEEEECCCeEEEEECCCCe--EEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeCCCcEEEEE-eCCCC
Q psy7057 45 PGAKVNTLLSASWDMTAKLWCLESQQ--CKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSEEGEFLKTL-TGHTD 120 (557)
Q Consensus 45 ~~~~~~~l~sgs~Dg~i~iwd~~~~~--~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~~~~~~~l-~~h~~ 120 (557)
++|++++|++++. ++|++||+.++. ....+..|...+.+++|+|+| .|++++ ++.|++||..+.....+ ..+..
T Consensus 116 ~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~~~~~~~~~ 193 (741)
T 2ecf_A 116 WSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQMQLTADGST 193 (741)
T ss_dssp ECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEEECCCCCCS
T ss_pred ECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEEEeccCCcc
Confidence 6788999999987 999999998872 345577788899999999999 677766 56999999655444443 33333
Q ss_pred C----------------EEEEEEeCCCe-EEEEECCC---------------------------------eEEEEECCC-
Q psy7057 121 C----------------VRGLAVLNDTD-FVSCSNDA---------------------------------SIRVWDSTT- 149 (557)
Q Consensus 121 ~----------------V~~l~~~~~~~-lvs~s~Dg---------------------------------~I~vwd~~~- 149 (557)
. +.+++|+|+++ |++++.|+ .|.+||+.+
T Consensus 194 ~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~ 273 (741)
T 2ecf_A 194 TIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQ 273 (741)
T ss_dssp SEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTT
T ss_pred ceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCC
Confidence 2 47899999987 67776665 789999988
Q ss_pred CeEEEEEe--CCCCcEEEEEE-cCCEEEEEeC-----CCeEEEEECCCC---ceEeeCCc----cEEEEEEcCCCc-EEE
Q psy7057 150 GKCVHTMY--GHPNFIYSVAA-HGDLITSGGE-----DQCVCVYQNKAQ---NSFMIPAM----SVWAVAILPNSD-IVT 213 (557)
Q Consensus 150 ~~~~~~~~--~h~~~V~~l~~-~~~~l~s~s~-----Dg~I~iwd~~~~---~~~~~~~~----~v~~v~~~p~g~-l~s 213 (557)
++...... .|...+.+++| +|+.|++++. +..|++||..+. ..+..+.. .+.+++|+|+|+ +++
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~ 353 (741)
T 2ecf_A 274 AQTQWIDLGKEQDIYLARVNWRDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDGSILWS 353 (741)
T ss_dssp CCCEEECCCSCSSEEEEEEEEEETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTSCEEEE
T ss_pred CceEEecCCCCcceEEEEEEeCCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCCCeEEEE
Confidence 87654433 37778888887 7777776653 568999997765 22223322 346889999999 667
Q ss_pred EEcCCcEEEEecCCCCcchhHHHhcccceeEEE-eccCCCceeEEEEeCCC--cEEEEecCC
Q psy7057 214 GSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKL-KSANEQEIGGVKVSDDG--IVRVFSANP 272 (557)
Q Consensus 214 g~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l-~~~~~~~~~~vs~s~DG--~IrvW~~~~ 272 (557)
++.||.++||.++..... ..+..+...+..+ .+.++....+++++.|+ .++||+++.
T Consensus 354 ~~~~g~~~l~~~~~~~~~--~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~ 413 (741)
T 2ecf_A 354 SERTGFQHLYRIDSKGKA--AALTHGNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPL 413 (741)
T ss_dssp ECTTSSCEEEEECSSSCE--EESCCSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEET
T ss_pred ecCCCccEEEEEcCCCCe--eeeeecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEc
Confidence 888998888877632211 1222334455555 36666665556777777 899998764
No 135
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.77 E-value=4.4e-17 Score=164.17 Aligned_cols=244 Identities=9% Similarity=0.110 Sum_probs=165.8
Q ss_pred EEEEECCCcEEEEcCCC------------------CCCCCCCCEEEEEECC-CeEEEEECC--CCe--EEEEEcccCCcE
Q psy7057 26 ILSASRDKSAKLWKPND------------------LSPGAKVNTLLSASWD-MTAKLWCLE--SQQ--CKLTIRQHEMAV 82 (557)
Q Consensus 26 l~sgs~Dg~V~iWd~~~------------------~~~~~~~~~l~sgs~D-g~i~iwd~~--~~~--~~~~l~~h~~~V 82 (557)
+++++.|+.|++|++.. +.+++++++|++++.+ +.|++|++. +++ .+..+..+. .+
T Consensus 8 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~ 86 (343)
T 1ri6_A 8 YIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-SL 86 (343)
T ss_dssp EEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-CC
T ss_pred EEeCCCCCeEEEEEECCCCcEEEeeeEecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-CC
Confidence 33447799999998751 5678889999998887 999999987 554 344555444 78
Q ss_pred EEEEEcCCC-EEEEEE-CCCeEEEEeC-CC---cEEEEEeCCCCCEEEEEEeCCCe-EEEEE-CCCeEEEEECCC-CeEE
Q psy7057 83 WGVIQLANG-IIVTGC-ADKTIKLHSE-EG---EFLKTLTGHTDCVRGLAVLNDTD-FVSCS-NDASIRVWDSTT-GKCV 153 (557)
Q Consensus 83 ~~l~~~~~~-~l~sgs-~dg~I~vwd~-~~---~~~~~l~~h~~~V~~l~~~~~~~-lvs~s-~Dg~I~vwd~~~-~~~~ 153 (557)
.+++|+|++ .+++++ .++.|.+||. .+ ..+..+. ....+.+++|+|++. +++++ .++.|++||+.+ ++..
T Consensus 87 ~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~ 165 (343)
T 1ri6_A 87 THISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVE-GLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLV 165 (343)
T ss_dssp SEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEEC-CCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEE
T ss_pred cEEEEcCCCCEEEEEecCCCeEEEEECCCCcccccccccc-CCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCcee
Confidence 899999998 565555 4889999996 22 2333444 344689999999986 55555 899999999987 6543
Q ss_pred E----EEeC-CCCcEEEEEE--cCCEEEEE-eCCCeEEEEECCC--C-----ceEeeC------CccEEEEEEcCCCc-E
Q psy7057 154 H----TMYG-HPNFIYSVAA--HGDLITSG-GEDQCVCVYQNKA--Q-----NSFMIP------AMSVWAVAILPNSD-I 211 (557)
Q Consensus 154 ~----~~~~-h~~~V~~l~~--~~~~l~s~-s~Dg~I~iwd~~~--~-----~~~~~~------~~~v~~v~~~p~g~-l 211 (557)
. .+.. ....+.++++ ++++++++ ..++.|++|++.. . ..+... ...+.+++|+|+++ +
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l 245 (343)
T 1ri6_A 166 AQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHL 245 (343)
T ss_dssp EEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEE
T ss_pred eecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEE
Confidence 2 2333 3457888888 66666544 5889999999743 2 112111 12567899999998 5
Q ss_pred E-EEEcCCcEEEEecCC--CCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecCC
Q psy7057 212 V-TGSSDGIVRVFSANP--DRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANP 272 (557)
Q Consensus 212 ~-sg~~Dg~I~iwd~~~--~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~ 272 (557)
+ ++..++.|++|++.. +........... ..+..+.+.+.....++++..|+.|++|+++.
T Consensus 246 ~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~ 308 (343)
T 1ri6_A 246 YACDRTASLITVFSVSEDGSVLSKEGFQPTE-TQPRGFNVDHSGKYLIAAGQKSHHISVYEIVG 308 (343)
T ss_dssp EEEETTTTEEEEEEECTTSCCEEEEEEEECS-SSCCCEEECTTSSEEEEECTTTCEEEEEEEET
T ss_pred EEEecCCCEEEEEEEcCCCCceEEeeeecCC-CccceEEECCCCCEEEEecCCCCeEEEEEEcC
Confidence 5 455799999999983 222111111111 22556667766665445555789999997664
No 136
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.77 E-value=5.4e-17 Score=163.49 Aligned_cols=255 Identities=8% Similarity=0.036 Sum_probs=175.5
Q ss_pred EEEcCCCc--EEEEECCCcEEEEcCCC---------------CCCCCCCCEEEEEEC-CCeEEEEECCCCeE-EEEEccc
Q psy7057 18 LSVTPDGC--ILSASRDKSAKLWKPND---------------LSPGAKVNTLLSASW-DMTAKLWCLESQQC-KLTIRQH 78 (557)
Q Consensus 18 l~~spdg~--l~sgs~Dg~V~iWd~~~---------------~~~~~~~~~l~sgs~-Dg~i~iwd~~~~~~-~~~l~~h 78 (557)
..|.+++. +++++.+++|++||+.+ +.++++++++++++. ++.|.+||+.+++. ...+..+
T Consensus 3 ~~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~ 82 (331)
T 3u4y_A 3 AMFQTTSNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFVDTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEG 82 (331)
T ss_dssp ----CCCCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEEEEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEEC
T ss_pred eeEcCCCCEEEEEecCCCeEEEEeCcccceeeeEEccCCcceEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccC
Confidence 34556554 66888999999999876 566788887777666 89999999999887 7777777
Q ss_pred CCcEEEEEEcCCC-EEEEEECCC---eEEEEeC-CCcEEEEEeCCCCCEEEEEEeCCCe-EE-EEECCCe-EEEEECCCC
Q psy7057 79 EMAVWGVIQLANG-IIVTGCADK---TIKLHSE-EGEFLKTLTGHTDCVRGLAVLNDTD-FV-SCSNDAS-IRVWDSTTG 150 (557)
Q Consensus 79 ~~~V~~l~~~~~~-~l~sgs~dg---~I~vwd~-~~~~~~~l~~h~~~V~~l~~~~~~~-lv-s~s~Dg~-I~vwd~~~~ 150 (557)
..+..+++|+|++ .++++..++ .|.+||. +++.+..+.. ...+.+++|+|+++ ++ +...++. |.+|++...
T Consensus 83 ~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~ 161 (331)
T 3u4y_A 83 QSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPI-PYDAVGIAISPNGNGLILIDRSSANTVRRFKIDAD 161 (331)
T ss_dssp SSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEEC-CTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTT
T ss_pred CCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEEC-CCCccceEECCCCCEEEEEecCCCceEEEEEECCC
Confidence 7766669999998 666554443 8999995 4566666554 45579999999986 44 5566688 999998753
Q ss_pred eEE----EEEeCCCCcEEEEEE--cCCEE-EEEeCCCeEEEEECCCCce---E--eeCCccEEEEEEcCCCc-EEEE-Ec
Q psy7057 151 KCV----HTMYGHPNFIYSVAA--HGDLI-TSGGEDQCVCVYQNKAQNS---F--MIPAMSVWAVAILPNSD-IVTG-SS 216 (557)
Q Consensus 151 ~~~----~~~~~h~~~V~~l~~--~~~~l-~s~s~Dg~I~iwd~~~~~~---~--~~~~~~v~~v~~~p~g~-l~sg-~~ 216 (557)
..+ .....+.....++++ +++++ +++..++.|++||+.+... + ......+..++|+|+|+ ++++ ..
T Consensus 162 g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~ 241 (331)
T 3u4y_A 162 GVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTNNLPGTIVVSRDGSTVYVLTES 241 (331)
T ss_dssp CCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECSSCCCCEEECTTSSEEEEECSS
T ss_pred CcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCCCCCceEEECCCCCEEEEEEcC
Confidence 322 122234556788888 67655 4555789999999765532 2 12335678899999999 5444 45
Q ss_pred CCcEEEEecCCCCcchhHHH-------hcccceeEEEeccCCCceeEEEEeCCCcEEEEecCCC
Q psy7057 217 DGIVRVFSANPDRQAEDAVQ-------AQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPD 273 (557)
Q Consensus 217 Dg~I~iwd~~~~~~~~~~~~-------~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~~ 273 (557)
++.|.+||..+++....... .........+.+.++.....+++..++.|+||++...
T Consensus 242 ~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~ 305 (331)
T 3u4y_A 242 TVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISGK 305 (331)
T ss_dssp EEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSC
T ss_pred CCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecCC
Confidence 78899999987665111000 0111111335666777666677778889999998753
No 137
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.77 E-value=3.8e-16 Score=158.28 Aligned_cols=218 Identities=11% Similarity=0.091 Sum_probs=166.7
Q ss_pred cccEEEEEEcCCCc-EEEEEC-------CCcEEEEcCCC---------------CCCCCCCCEEEEE-ECCCeEEEEECC
Q psy7057 12 SMDVRSLSVTPDGC-ILSASR-------DKSAKLWKPND---------------LSPGAKVNTLLSA-SWDMTAKLWCLE 67 (557)
Q Consensus 12 ~~~V~~l~~spdg~-l~sgs~-------Dg~V~iWd~~~---------------~~~~~~~~~l~sg-s~Dg~i~iwd~~ 67 (557)
...+..++|+|+++ +++++. ++.|.+||..+ +.++++++.++.+ ..++.|.+||+.
T Consensus 40 ~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~ 119 (353)
T 3vgz_A 40 GKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDLKPFGATINNTTQTLWFGNTVNSAVTAIDAK 119 (353)
T ss_dssp ESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESSCCCSEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred ccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCCCcceEEECCCCCEEEEEecCCCEEEEEeCC
Confidence 45688999999997 666653 67899999876 5567788865554 557999999999
Q ss_pred CCeEEEEEcccCCc---------EEEEEEcCCC-EEEEEE--CCCeEEEEeC-CCcEEEEEeCCCCCEEEEEEeCCCe-E
Q psy7057 68 SQQCKLTIRQHEMA---------VWGVIQLANG-IIVTGC--ADKTIKLHSE-EGEFLKTLTGHTDCVRGLAVLNDTD-F 133 (557)
Q Consensus 68 ~~~~~~~l~~h~~~---------V~~l~~~~~~-~l~sgs--~dg~I~vwd~-~~~~~~~l~~h~~~V~~l~~~~~~~-l 133 (557)
+++.+..+..+... +.+++++|++ .+++++ .++.|.+||. +++.+..+..+...+.+++++|++. +
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l 199 (353)
T 3vgz_A 120 TGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRL 199 (353)
T ss_dssp TCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEE
T ss_pred CCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCCCEE
Confidence 99988888765422 7899999988 555554 4788999994 5666677765666789999999976 6
Q ss_pred EEEECCCeEEEEECCCCeEEEEEeC----CCCcEEEEEE--cCCEEEEEe-CCCeEEEEECCCCc---eEeeCCccEEEE
Q psy7057 134 VSCSNDASIRVWDSTTGKCVHTMYG----HPNFIYSVAA--HGDLITSGG-EDQCVCVYQNKAQN---SFMIPAMSVWAV 203 (557)
Q Consensus 134 vs~s~Dg~I~vwd~~~~~~~~~~~~----h~~~V~~l~~--~~~~l~s~s-~Dg~I~iwd~~~~~---~~~~~~~~v~~v 203 (557)
++++.++.|.+||+.+++.+..+.. +...+.++++ +++.+++++ .++.|.+||..+.. .+.... ...+
T Consensus 200 ~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~--~~~~ 277 (353)
T 3vgz_A 200 YTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPE--SLAV 277 (353)
T ss_dssp EEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSS--CCCE
T ss_pred EEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCC--CceE
Confidence 6888899999999999998888764 5556778888 677666555 55999999987652 333222 3579
Q ss_pred EEcCCCc-EEEEE-cCCcEEEEecCCCCcc
Q psy7057 204 AILPNSD-IVTGS-SDGIVRVFSANPDRQA 231 (557)
Q Consensus 204 ~~~p~g~-l~sg~-~Dg~I~iwd~~~~~~~ 231 (557)
+|+|+++ +++++ .++.|.+||..+.+..
T Consensus 278 ~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~ 307 (353)
T 3vgz_A 278 LFNPARNEAYVTHRQAGKVSVIDAKSYKVV 307 (353)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTTTEEE
T ss_pred EECCCCCEEEEEECCCCeEEEEECCCCeEE
Confidence 9999998 55544 6999999999876543
No 138
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.74 E-value=9.1e-17 Score=157.64 Aligned_cols=210 Identities=11% Similarity=0.039 Sum_probs=159.3
Q ss_pred EEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC------------------CCCCCCCCEEEEEEC--CCeEEEE
Q psy7057 6 TALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND------------------LSPGAKVNTLLSASW--DMTAKLW 64 (557)
Q Consensus 6 ~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~------------------~~~~~~~~~l~sgs~--Dg~i~iw 64 (557)
..+..|...|.+++|+|+|+ |++++ ++.|++||+.+ +.+++++..|++++. ++..+||
T Consensus 35 ~~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~ 113 (297)
T 2ojh_A 35 RVVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIY 113 (297)
T ss_dssp EEEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEE
T ss_pred eeeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCCCcceEE
Confidence 35667899999999999999 55554 88999999754 556788999999993 3445555
Q ss_pred --ECCCCeEEEEEcccCCcEEEEEEcCCC-EEE-EEECCCeEEEEe--CCCcEEEEEeCCCCCEEEEEEeCCCe-EEEEE
Q psy7057 65 --CLESQQCKLTIRQHEMAVWGVIQLANG-IIV-TGCADKTIKLHS--EEGEFLKTLTGHTDCVRGLAVLNDTD-FVSCS 137 (557)
Q Consensus 65 --d~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~-sgs~dg~I~vwd--~~~~~~~~l~~h~~~V~~l~~~~~~~-lvs~s 137 (557)
++.+++ ...+..+ ..+.+++|+|++ .|+ +++.++.+++|+ ..+.....+..|...+.+++|+|++. ++.++
T Consensus 114 ~~~~~~~~-~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~ 191 (297)
T 2ojh_A 114 LLPSTGGT-PRLMTKN-LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFNS 191 (297)
T ss_dssp EEETTCCC-CEECCSS-SSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCEEEEEECTTSSEEEEEE
T ss_pred EEECCCCc-eEEeecC-CCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCCccccceECCCCCEEEEEe
Confidence 555544 3444433 348899999998 454 788999999998 45556677778888999999999987 55444
Q ss_pred -CCCeEEEEECC-CCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCC-----------CeEEEEECCCC--c---eEeeCC
Q psy7057 138 -NDASIRVWDST-TGKCVHTMYGHPNFIYSVAA--HGDLITSGGED-----------QCVCVYQNKAQ--N---SFMIPA 197 (557)
Q Consensus 138 -~Dg~I~vwd~~-~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~D-----------g~I~iwd~~~~--~---~~~~~~ 197 (557)
.++.+++|++. .+..+..+..|...+.+++| ++++|++++.+ +.|++||+... . .+..+.
T Consensus 192 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~ 271 (297)
T 2ojh_A 192 SRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQ 271 (297)
T ss_dssp CTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEEEEEST
T ss_pred cCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeeeccCCCC
Confidence 68999999886 55667778888888999998 67788877765 56999997654 2 223567
Q ss_pred ccEEEEEEcCCCc-EEEEEcCC
Q psy7057 198 MSVWAVAILPNSD-IVTGSSDG 218 (557)
Q Consensus 198 ~~v~~v~~~p~g~-l~sg~~Dg 218 (557)
..+.+++|+|+++ |++++.+.
T Consensus 272 ~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 272 GTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp TTSCSCCBCTTSSEEEEEEECC
T ss_pred cccccceECCCCCEEEEEEecc
Confidence 7899999999998 66666543
No 139
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.74 E-value=5.2e-17 Score=159.37 Aligned_cols=230 Identities=10% Similarity=-0.033 Sum_probs=164.5
Q ss_pred EEECCCcEEEEcCCC---------------CCCCCCCCEEEEEECCCeEEEEECCC-CeEEEEEccc-CCcEEEEEEcCC
Q psy7057 28 SASRDKSAKLWKPND---------------LSPGAKVNTLLSASWDMTAKLWCLES-QQCKLTIRQH-EMAVWGVIQLAN 90 (557)
Q Consensus 28 sgs~Dg~V~iWd~~~---------------~~~~~~~~~l~sgs~Dg~i~iwd~~~-~~~~~~l~~h-~~~V~~l~~~~~ 90 (557)
+++.|++|++||+.+ +.++|++.+|++++ ++.|++||+.+ ++....+..| ...+.+++|+|+
T Consensus 17 ~~~~~~~i~~~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spd 95 (297)
T 2ojh_A 17 GGSMRSSIEIFNIRTRKMRVVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPD 95 (297)
T ss_dssp -CCCCEEEEEEETTTTEEEEEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTT
T ss_pred CCCcceeEEEEeCCCCceeeeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECCC
Confidence 456789999999876 67888999999987 78999999999 8777666665 478899999999
Q ss_pred C-EEEEEE--CCCeEEEEe--CCCcEEEEEeCCCCCEEEEEEeCCCe-EE-EEECCCeEEEEECCC-CeEEEEEeCCCCc
Q psy7057 91 G-IIVTGC--ADKTIKLHS--EEGEFLKTLTGHTDCVRGLAVLNDTD-FV-SCSNDASIRVWDSTT-GKCVHTMYGHPNF 162 (557)
Q Consensus 91 ~-~l~sgs--~dg~I~vwd--~~~~~~~~l~~h~~~V~~l~~~~~~~-lv-s~s~Dg~I~vwd~~~-~~~~~~~~~h~~~ 162 (557)
+ .|++++ .++...||. ..+.....+..+. .+.+++|+|++. ++ +++.++.+++|++.. ......+..|...
T Consensus 96 g~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 174 (297)
T 2ojh_A 96 GALYAISDKVEFGKSAIYLLPSTGGTPRLMTKNL-PSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGR 174 (297)
T ss_dssp SSEEEEEECTTTSSCEEEEEETTCCCCEECCSSS-SEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSC
T ss_pred CCEEEEEEeCCCCcceEEEEECCCCceEEeecCC-CccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCCc
Confidence 9 788888 334555554 4555555555444 489999999987 55 788899999998532 2334566678889
Q ss_pred EEEEEE--cCCEEEEEe-CCCeEEEEECC--CC--ceEeeCCccEEEEEEcCCCc-EEEEEcC-----------CcEEEE
Q psy7057 163 IYSVAA--HGDLITSGG-EDQCVCVYQNK--AQ--NSFMIPAMSVWAVAILPNSD-IVTGSSD-----------GIVRVF 223 (557)
Q Consensus 163 V~~l~~--~~~~l~s~s-~Dg~I~iwd~~--~~--~~~~~~~~~v~~v~~~p~g~-l~sg~~D-----------g~I~iw 223 (557)
+.+++| +++.|+.++ .++.+++|+.. .. ..+..+...+.+++|+|+++ |++++.+ +.|++|
T Consensus 175 ~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~ 254 (297)
T 2ojh_A 175 NDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLM 254 (297)
T ss_dssp EEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEE
T ss_pred cccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEE
Confidence 999999 677777655 58999999853 22 45556667899999999998 6666665 569999
Q ss_pred ecCCCCcchhHHHhcccceeEEEeccCCCceeEEEE
Q psy7057 224 SANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKV 259 (557)
Q Consensus 224 d~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~ 259 (557)
++.++..........+...+..+.+.+.....++++
T Consensus 255 d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~ 290 (297)
T 2ojh_A 255 DMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVR 290 (297)
T ss_dssp ETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEE
T ss_pred ecCCCCceeeeccCCCCcccccceECCCCCEEEEEE
Confidence 998765433222223344455555655555433333
No 140
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.74 E-value=3e-16 Score=175.35 Aligned_cols=256 Identities=8% Similarity=0.002 Sum_probs=179.4
Q ss_pred ccEEEEEEcCCCcEEEEECCCcEEEEcCCC---------------CCCCCCCCEEEEEECCCeEEEEECCC-----CeEE
Q psy7057 13 MDVRSLSVTPDGCILSASRDKSAKLWKPND---------------LSPGAKVNTLLSASWDMTAKLWCLES-----QQCK 72 (557)
Q Consensus 13 ~~V~~l~~spdg~l~sgs~Dg~V~iWd~~~---------------~~~~~~~~~l~sgs~Dg~i~iwd~~~-----~~~~ 72 (557)
..|.+++|+||+.++.+ .+++|++||+.+ +.++|+++.|+++ .++.|++|++.+ ++..
T Consensus 82 ~~v~~~~~spd~~~~~~-~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~ 159 (706)
T 2z3z_A 82 FPSFRTLDAGRGLVVLF-TQGGLVGFDMLARKVTYLFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAI 159 (706)
T ss_dssp CCCEEEEETTTTEEEEE-ETTEEEEEETTTTEEEEEECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCE
T ss_pred cCceeEEECCCCeEEEE-ECCEEEEEECCCCceEEccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcE
Confidence 56999999999445544 469999999875 6788999999985 689999999988 7766
Q ss_pred EEEcccCCc--------------EEEEEEcCCC-EEEEEE---------------------------------CCCeEEE
Q psy7057 73 LTIRQHEMA--------------VWGVIQLANG-IIVTGC---------------------------------ADKTIKL 104 (557)
Q Consensus 73 ~~l~~h~~~--------------V~~l~~~~~~-~l~sgs---------------------------------~dg~I~v 104 (557)
.....+... +.++.|+|+| .|++++ .+..|++
T Consensus 160 ~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~ 239 (706)
T 2z3z_A 160 AVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGI 239 (706)
T ss_dssp ESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEE
T ss_pred EeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEE
Confidence 544444333 4789999999 788877 4567999
Q ss_pred EeCCCcEEEEEe---CCCCCEEEEEEeCCCe-EEEEECCC-----eEEEEECCCCeEEEEEe--CCCC---cEEEEEE--
Q psy7057 105 HSEEGEFLKTLT---GHTDCVRGLAVLNDTD-FVSCSNDA-----SIRVWDSTTGKCVHTMY--GHPN---FIYSVAA-- 168 (557)
Q Consensus 105 wd~~~~~~~~l~---~h~~~V~~l~~~~~~~-lvs~s~Dg-----~I~vwd~~~~~~~~~~~--~h~~---~V~~l~~-- 168 (557)
||..+.....+. .|...+.+++|+|+++ +++++.++ .|++||+.+++....+. .+.. .+.+++|
T Consensus 240 ~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp 319 (706)
T 2z3z_A 240 YHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLP 319 (706)
T ss_dssp EETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECT
T ss_pred EECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeec
Confidence 996555444333 4677899999999987 66766665 89999999984443332 2222 2345566
Q ss_pred --cCCEEEEEeCCCeEEEEECC-CC---ceEeeCCccEEE-EEEcCCCc-EEEEE-cCC----cEEEEecCCCCcchhHH
Q psy7057 169 --HGDLITSGGEDQCVCVYQNK-AQ---NSFMIPAMSVWA-VAILPNSD-IVTGS-SDG----IVRVFSANPDRQAEDAV 235 (557)
Q Consensus 169 --~~~~l~s~s~Dg~I~iwd~~-~~---~~~~~~~~~v~~-v~~~p~g~-l~sg~-~Dg----~I~iwd~~~~~~~~~~~ 235 (557)
+++++++++.|+.+++|... .. ..+..+...+.+ ++|+|+++ |+.++ .++ .|..|+..++......
T Consensus 320 ~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~l~- 398 (706)
T 2z3z_A 320 GSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGKTKDLT- 398 (706)
T ss_dssp TCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCCCEESC-
T ss_pred CCCCEEEEEEccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCCceecc-
Confidence 55688888899999998743 22 445555566776 79999998 55444 444 5666676665432211
Q ss_pred HhcccceeEEEeccCCCceeEEEEeCC---CcEEEEecCCCh
Q psy7057 236 QAQYAEEVKKLKSANEQEIGGVKVSDD---GIVRVFSANPDR 274 (557)
Q Consensus 236 ~~~~~~~v~~l~~~~~~~~~~vs~s~D---G~IrvW~~~~~~ 274 (557)
+...+..+.+.++....+++++.+ +.|++|++..++
T Consensus 399 ---~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 399 ---PESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKGS 437 (706)
T ss_dssp ---CSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSSCE
T ss_pred ---CCCceEEEEECCCCCEEEEEecCCCCCcEEEEEECCCCe
Confidence 334466777777776555555544 579999987764
No 141
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.73 E-value=3.3e-16 Score=170.03 Aligned_cols=226 Identities=12% Similarity=-0.002 Sum_probs=169.5
Q ss_pred CCCCCCEEEEEECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeC---CCcEEEEEeCCCC
Q psy7057 45 PGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSE---EGEFLKTLTGHTD 120 (557)
Q Consensus 45 ~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~---~~~~~~~l~~h~~ 120 (557)
+++++..+++++.|++|.+||..+++++.++..+.. +.+++|+|++ .+++++.|++|++||. +++++.++. +..
T Consensus 145 ~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~-~g~ 222 (543)
T 1nir_A 145 LDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIK-IGI 222 (543)
T ss_dssp CCGGGEEEEEEGGGTEEEEEETTTCCEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEE-CCS
T ss_pred cCCCCEEEEEEcCCCeEEEEECCCceEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEe-cCC
Confidence 455677888899999999999999999999884433 8899999999 8999999999999997 567777777 456
Q ss_pred CEEEEEEeC----CCe-EEEEE-CCCeEEEEECCCCeEEEEEeCC----------C-CcEEEEEEc--CC-EEEEEeCCC
Q psy7057 121 CVRGLAVLN----DTD-FVSCS-NDASIRVWDSTTGKCVHTMYGH----------P-NFIYSVAAH--GD-LITSGGEDQ 180 (557)
Q Consensus 121 ~V~~l~~~~----~~~-lvs~s-~Dg~I~vwd~~~~~~~~~~~~h----------~-~~V~~l~~~--~~-~l~s~s~Dg 180 (557)
.+++++|+| +++ +++++ .+++|.+||..+++++.++..+ . ..+.++.++ +. ++++...++
T Consensus 223 ~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g 302 (543)
T 1nir_A 223 EARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETG 302 (543)
T ss_dssp EEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTT
T ss_pred CcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCC
Confidence 789999999 877 44555 5899999999999999988652 2 368888883 33 677888999
Q ss_pred eEEEEECCCC---c-eEeeCCccEEEEEEcCCCc-EEEE-EcCCcEEEEecCCCCcchhHHHh--cccceeEEEeccCCC
Q psy7057 181 CVCVYQNKAQ---N-SFMIPAMSVWAVAILPNSD-IVTG-SSDGIVRVFSANPDRQAEDAVQA--QYAEEVKKLKSANEQ 252 (557)
Q Consensus 181 ~I~iwd~~~~---~-~~~~~~~~v~~v~~~p~g~-l~sg-~~Dg~I~iwd~~~~~~~~~~~~~--~~~~~v~~l~~~~~~ 252 (557)
.|.+||.... . ....+...+.+++|+|+++ ++++ ..+++|++||..+++........ .|.+....+ ..+..
T Consensus 303 ~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~-~~p~~ 381 (543)
T 1nir_A 303 KVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF-VHPKY 381 (543)
T ss_dssp EEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEE-EETTT
T ss_pred eEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCccc-CCCCC
Confidence 9999997654 1 1223456788999999999 5544 45899999999988654332211 122222222 23443
Q ss_pred ceeEEEEe-CCCcEEEEecCCC
Q psy7057 253 EIGGVKVS-DDGIVRVFSANPD 273 (557)
Q Consensus 253 ~~~~vs~s-~DG~IrvW~~~~~ 273 (557)
....++++ .|++|+||+++++
T Consensus 382 g~~~~s~~~~d~~V~v~d~~~~ 403 (543)
T 1nir_A 382 GPVWSTSHLGDGSISLIGTDPK 403 (543)
T ss_dssp EEEEEEEBSSSSEEEEEECCTT
T ss_pred ccEEEeccCCCceEEEEEeCCC
Confidence 44567775 6899999999873
No 142
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.72 E-value=4.1e-17 Score=172.26 Aligned_cols=151 Identities=16% Similarity=0.150 Sum_probs=121.2
Q ss_pred cCCcEEEEEEcCCC-EEE----EEECCCeEEEEeCCC---------c---EEEEEeCCCCCEEEEEEeCC-Ce-EEEEEC
Q psy7057 78 HEMAVWGVIQLANG-IIV----TGCADKTIKLHSEEG---------E---FLKTLTGHTDCVRGLAVLND-TD-FVSCSN 138 (557)
Q Consensus 78 h~~~V~~l~~~~~~-~l~----sgs~dg~I~vwd~~~---------~---~~~~l~~h~~~V~~l~~~~~-~~-lvs~s~ 138 (557)
+...|.+++|+|++ .|+ +|+.|++|++||... + .+..+.+|...|++++|+|+ +. |++++.
T Consensus 91 ~~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~ 170 (434)
T 2oit_A 91 MKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLA 170 (434)
T ss_dssp CSSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEET
T ss_pred CCCcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEEC
Confidence 67789999999998 777 788899999999321 1 24556789999999999997 44 779999
Q ss_pred CCeEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC--ceEeeC-------CccEEEEEEcC
Q psy7057 139 DASIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ--NSFMIP-------AMSVWAVAILP 207 (557)
Q Consensus 139 Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~--~~~~~~-------~~~v~~v~~~p 207 (557)
|++|++||++++..+....+|...|++++| ++++|++|+.|++|++||.+.. ..+..+ ...|.+++|++
T Consensus 171 Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~w~~ 250 (434)
T 2oit_A 171 DGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPTLQEKKVIPCPPFYESDHPVRVLDVLWIG 250 (434)
T ss_dssp TSCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTTCCEEEEECCCTTCCTTSCEEEEEEEEEE
T ss_pred CCeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccCCcccccccCCcccCCCCceeEEEEEEec
Confidence 999999999999887777889999999999 6789999999999999998722 333332 23789999999
Q ss_pred CCcEE--EEEcCCc------EEEEecCCC
Q psy7057 208 NSDIV--TGSSDGI------VRVFSANPD 228 (557)
Q Consensus 208 ~g~l~--sg~~Dg~------I~iwd~~~~ 228 (557)
++.++ .++.||. +++|++...
T Consensus 251 ~~~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 251 TYVFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp TTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred CceEEEEEccCCCccCCCCceEEEEeccC
Confidence 88844 3434433 899998754
No 143
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.72 E-value=8.9e-16 Score=154.56 Aligned_cols=215 Identities=11% Similarity=0.133 Sum_probs=155.2
Q ss_pred cCcccEEEEEEcCCCc-EEEEECC-CcEEEEcCC--C-----------------CCCCCCCCEEEEEEC-CCeEEEEECC
Q psy7057 10 GHSMDVRSLSVTPDGC-ILSASRD-KSAKLWKPN--D-----------------LSPGAKVNTLLSASW-DMTAKLWCLE 67 (557)
Q Consensus 10 gH~~~V~~l~~spdg~-l~sgs~D-g~V~iWd~~--~-----------------~~~~~~~~~l~sgs~-Dg~i~iwd~~ 67 (557)
.|...+.+++|+|+|+ |++++.+ +.|++|++. + +.+++++++|++++. ++.|.+|++.
T Consensus 35 ~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~ 114 (343)
T 1ri6_A 35 DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLE 114 (343)
T ss_dssp ECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSCCSEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred ecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCCCCcEEEEcCCCCEEEEEecCCCeEEEEECC
Confidence 4778899999999998 7788776 999999987 2 457788998877765 8899999994
Q ss_pred ---CCeEEEEEcccCCcEEEEEEcCCC-EEEEEE-CCCeEEEEeCC--CcEEE----EEeC-CCCCEEEEEEeCCCe-EE
Q psy7057 68 ---SQQCKLTIRQHEMAVWGVIQLANG-IIVTGC-ADKTIKLHSEE--GEFLK----TLTG-HTDCVRGLAVLNDTD-FV 134 (557)
Q Consensus 68 ---~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs-~dg~I~vwd~~--~~~~~----~l~~-h~~~V~~l~~~~~~~-lv 134 (557)
+.+....+..+ ..+.+++|+|++ .+++++ .++.|++||.. +.... .+.. ....+.+++|+|++. ++
T Consensus 115 ~~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~ 193 (343)
T 1ri6_A 115 DGLPVGVVDVVEGL-DGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAY 193 (343)
T ss_dssp TTEEEEEEEEECCC-TTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEE
T ss_pred CCccccccccccCC-CCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEE
Confidence 33455555543 458889999998 677766 89999999943 43322 2332 345789999999987 44
Q ss_pred -EEECCCeEEEEECCC--CeE--EEEEeC----C--CCcEEEEEE--cCCEEE-EEeCCCeEEEEECCC----Cc---eE
Q psy7057 135 -SCSNDASIRVWDSTT--GKC--VHTMYG----H--PNFIYSVAA--HGDLIT-SGGEDQCVCVYQNKA----QN---SF 193 (557)
Q Consensus 135 -s~s~Dg~I~vwd~~~--~~~--~~~~~~----h--~~~V~~l~~--~~~~l~-s~s~Dg~I~iwd~~~----~~---~~ 193 (557)
++..++.|++|++.. ++. ...+.. + ...+.++++ ++++|+ ++..++.|++|++.. .. .+
T Consensus 194 ~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~ 273 (343)
T 1ri6_A 194 CVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQ 273 (343)
T ss_dssp EEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEE
T ss_pred EEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeee
Confidence 445889999999853 432 333331 1 235667888 566666 555899999999762 22 22
Q ss_pred eeCCccEEEEEEcCCCc-EEEEE-cCCcEEEEecC
Q psy7057 194 MIPAMSVWAVAILPNSD-IVTGS-SDGIVRVFSAN 226 (557)
Q Consensus 194 ~~~~~~v~~v~~~p~g~-l~sg~-~Dg~I~iwd~~ 226 (557)
..+. .+.+++|+|+++ +++++ .++.|++|+++
T Consensus 274 ~~~~-~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d 307 (343)
T 1ri6_A 274 PTET-QPRGFNVDHSGKYLIAAGQKSHHISVYEIV 307 (343)
T ss_dssp ECSS-SCCCEEECTTSSEEEEECTTTCEEEEEEEE
T ss_pred cCCC-ccceEEECCCCCEEEEecCCCCeEEEEEEc
Confidence 2233 488999999998 66666 58999999765
No 144
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.71 E-value=1.7e-16 Score=167.56 Aligned_cols=178 Identities=11% Similarity=0.048 Sum_probs=138.5
Q ss_pred CcccEEEEEEcCCCc-EEEEECCCcEEEEcCC-------------------------------CCCCCCCCCEEE----E
Q psy7057 11 HSMDVRSLSVTPDGC-ILSASRDKSAKLWKPN-------------------------------DLSPGAKVNTLL----S 54 (557)
Q Consensus 11 H~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~-------------------------------~~~~~~~~~~l~----s 54 (557)
+...++.+++++++. +++++.++ +++|+.. .+++++++++|+ +
T Consensus 35 ~~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~s 113 (434)
T 2oit_A 35 PKERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMS 113 (434)
T ss_dssp CCSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEE
T ss_pred CCCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEec
Confidence 344688999999877 77888887 8887531 156788899999 7
Q ss_pred EECCCeEEEEECCCC--------e---EEEEEcccCCcEEEEEEcCC-C-EEEEEECCCeEEEEeC-CCcEEEEEeCCCC
Q psy7057 55 ASWDMTAKLWCLESQ--------Q---CKLTIRQHEMAVWGVIQLAN-G-IIVTGCADKTIKLHSE-EGEFLKTLTGHTD 120 (557)
Q Consensus 55 gs~Dg~i~iwd~~~~--------~---~~~~l~~h~~~V~~l~~~~~-~-~l~sgs~dg~I~vwd~-~~~~~~~l~~h~~ 120 (557)
|+.|++|++||+.++ + ....+.+|...|.+++|+|+ + +|++++.|++|++||. ++..+....+|..
T Consensus 114 gs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~~ 193 (434)
T 2oit_A 114 SEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPSTV 193 (434)
T ss_dssp TTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEECGGG
T ss_pred cCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccCCCC
Confidence 889999999998654 1 24556779999999999997 4 8999999999999994 4555666678999
Q ss_pred CEEEEEEeCCCe-EEEEECCCeEEEEECCCCeEEEEEeCCC-------CcEEEEEEcCC--EEEE-EeCCC------eEE
Q psy7057 121 CVRGLAVLNDTD-FVSCSNDASIRVWDSTTGKCVHTMYGHP-------NFIYSVAAHGD--LITS-GGEDQ------CVC 183 (557)
Q Consensus 121 ~V~~l~~~~~~~-lvs~s~Dg~I~vwd~~~~~~~~~~~~h~-------~~V~~l~~~~~--~l~s-~s~Dg------~I~ 183 (557)
.|++++|+|++. |++|+.|++|++||++ ++....+..|. ..|.+++|+++ ++++ ++.+| .++
T Consensus 194 ~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~ 272 (434)
T 2oit_A 194 AVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVV 272 (434)
T ss_dssp CEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEE
T ss_pred ceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceE
Confidence 999999999976 7899999999999988 66666665442 37899999433 3332 44443 389
Q ss_pred EEECCCC
Q psy7057 184 VYQNKAQ 190 (557)
Q Consensus 184 iwd~~~~ 190 (557)
+|+++..
T Consensus 273 i~~l~~~ 279 (434)
T 2oit_A 273 MALLPKK 279 (434)
T ss_dssp EEECCCT
T ss_pred EEEeccC
Confidence 9997643
No 145
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.71 E-value=3.7e-16 Score=182.74 Aligned_cols=257 Identities=9% Similarity=0.034 Sum_probs=194.9
Q ss_pred EEeccCcccEEEEEEcCCCcEEEEECCCcEEEEcCCC----------------CCCCCCCCEEEEEECCCeEEEEECCCC
Q psy7057 6 TALYGHSMDVRSLSVTPDGCILSASRDKSAKLWKPND----------------LSPGAKVNTLLSASWDMTAKLWCLESQ 69 (557)
Q Consensus 6 ~~l~gH~~~V~~l~~spdg~l~sgs~Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~ 69 (557)
..+.+|...+.+++|+++..+++++.|++++||.+.. ..+++++..|+.+. ++.|.+|++...
T Consensus 197 ~~l~~~~~~v~~~~~s~d~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~~~~~SpDG~~la~~~-~~~i~~~d~~~~ 275 (1045)
T 1k32_A 197 KKIVDMSTHVSSPVIVGHRIYFITDIDGFGQIYSTDLDGKDLRKHTSFTDYYPRHLNTDGRRILFSK-GGSIYIFNPDTE 275 (1045)
T ss_dssp EEEECCSSCCEEEEEETTEEEEEECTTSSCEEEEEETTSCSCEECCCCCSSCEEEEEESSSCEEEEE-TTEEEEECTTTC
T ss_pred EECcCCCCcccceEEeCCEEEEEEeccCceEEEEEeCCCCcceEecCCCCcceeeEcCCCCEEEEEe-CCEEEEecCCce
Confidence 4568899999999999983366788899999997532 34567788888874 899999998554
Q ss_pred eEEEEEcc-----------cCCcEEEEEEc-CCC-EEEEEECCCeEEEEeCCCcEEEEEeCCCC-CEEEEEEeCCCe-EE
Q psy7057 70 QCKLTIRQ-----------HEMAVWGVIQL-ANG-IIVTGCADKTIKLHSEEGEFLKTLTGHTD-CVRGLAVLNDTD-FV 134 (557)
Q Consensus 70 ~~~~~l~~-----------h~~~V~~l~~~-~~~-~l~sgs~dg~I~vwd~~~~~~~~l~~h~~-~V~~l~~~~~~~-lv 134 (557)
. +..+.. |...+.+++|+ |+| .|++++ ++.|.+|+..+.....+..|.. .+.+++|+ ++. ++
T Consensus 276 ~-l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~s-dg~~l~ 352 (1045)
T 1k32_A 276 K-IEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLKVPEPLRIRYVRRGGD-TKVAFI 352 (1045)
T ss_dssp C-EEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEEECSCCSCEEEEEECSS-SEEEEE
T ss_pred E-eeeeccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceEEccCCCcceEEeeeEc-CCCeEE
Confidence 4 335554 34468899999 999 677776 8899999976655666777887 89999999 876 77
Q ss_pred EEECCCeEE-EEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC--c-eEeeCCccEEEEEEcCC
Q psy7057 135 SCSNDASIR-VWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ--N-SFMIPAMSVWAVAILPN 208 (557)
Q Consensus 135 s~s~Dg~I~-vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~--~-~~~~~~~~v~~v~~~p~ 208 (557)
+++.+..+. +||+.+++.. .+.+|...+.+++| +++.|++++.++.|++||+.+. . .+..|...+.+++|+|+
T Consensus 353 ~~s~~~~l~~~~d~~~~~~~-~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpD 431 (1045)
T 1k32_A 353 HGTREGDFLGIYDYRTGKAE-KFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDN 431 (1045)
T ss_dssp EEETTEEEEEEEETTTCCEE-ECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTT
T ss_pred EEECCCceEEEEECCCCCce-EecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCC
Confidence 888888888 9998877654 34478889999999 7889999999999999998765 2 33367778899999999
Q ss_pred Cc-EEEEEcCC----------cEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecC
Q psy7057 209 SD-IVTGSSDG----------IVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSAN 271 (557)
Q Consensus 209 g~-l~sg~~Dg----------~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~ 271 (557)
|+ |++++.++ .|++||+.+++.. ....+...+..+.+.++.. .++..+.++..++|+..
T Consensus 432 G~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~~~---~l~~~~~~~~~~~~spdG~-~l~~~s~~~~~~~~~~~ 501 (1045)
T 1k32_A 432 SRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIF---AATTENSHDYAPAFDADSK-NLYYLSYRSLDPSPDRV 501 (1045)
T ss_dssp SCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEE---ECSCSSSBEEEEEECTTSC-EEEEEESCCCCCEECSS
T ss_pred CCeEEEEecCccccccCCCCCeEEEEECCCCcEE---EeeCCCcccCCceEcCCCC-EEEEEecccCCcCcchh
Confidence 99 77666644 8999999876532 1223344455666666655 46677777777777643
No 146
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.70 E-value=8.1e-17 Score=180.31 Aligned_cols=255 Identities=9% Similarity=-0.031 Sum_probs=175.0
Q ss_pred cEEEEEEcCCCcEEEEECCCcEEEEcCCC-------------------CCCCCCCCEEEEEECC---------CeEEEEE
Q psy7057 14 DVRSLSVTPDGCILSASRDKSAKLWKPND-------------------LSPGAKVNTLLSASWD---------MTAKLWC 65 (557)
Q Consensus 14 ~V~~l~~spdg~l~sgs~Dg~V~iWd~~~-------------------~~~~~~~~~l~sgs~D---------g~i~iwd 65 (557)
.+.+++|+|||+++..+.||+|++||+.+ ++++|++++|++++.+ +.+.+||
T Consensus 18 ~~~~~~~spdg~~~~~~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d 97 (723)
T 1xfd_A 18 HDPEAKWISDTEFIYREQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSK 97 (723)
T ss_dssp CCCCCCBSSSSCBCCCCSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEE
T ss_pred cccccEEcCCCcEEEEeCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEE
Confidence 46789999999955558999999999754 4578899999999875 7888999
Q ss_pred CCCCeEEEEEc---ccCCcEEEEEEcCCC-EEEEEECCCeEEEEeCC-CcEEEEEeCCCCCE------------------
Q psy7057 66 LESQQCKLTIR---QHEMAVWGVIQLANG-IIVTGCADKTIKLHSEE-GEFLKTLTGHTDCV------------------ 122 (557)
Q Consensus 66 ~~~~~~~~~l~---~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~-~~~~~~l~~h~~~V------------------ 122 (557)
+.+++. ..+. .|...+.+++|+|+| .|+.++. +.|++||.. ++.......+...+
T Consensus 98 ~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~ 175 (723)
T 1xfd_A 98 IPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTH 175 (723)
T ss_dssp SSSCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSS
T ss_pred CCCCce-EeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCc
Confidence 998875 3333 344558899999999 7777775 799999954 44444444443333
Q ss_pred EEEEEeCCCe-EEEEECCC----------------------------------eEEEEECCCCeEEEEEeCC------CC
Q psy7057 123 RGLAVLNDTD-FVSCSNDA----------------------------------SIRVWDSTTGKCVHTMYGH------PN 161 (557)
Q Consensus 123 ~~l~~~~~~~-lvs~s~Dg----------------------------------~I~vwd~~~~~~~~~~~~h------~~ 161 (557)
.+++|+|+++ |++++.|+ .|++||+.++++...+..+ ..
T Consensus 176 ~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~ 255 (723)
T 1xfd_A 176 IAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREY 255 (723)
T ss_dssp EEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSE
T ss_pred ceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccc
Confidence 7899999987 66666442 7999999988865666654 56
Q ss_pred cEEEEEE--cCCEEEEEeC----CCeEEEEECCCCc--e-Eee-CCccE----EEEEEcCCCc-EEE--EEcCC------
Q psy7057 162 FIYSVAA--HGDLITSGGE----DQCVCVYQNKAQN--S-FMI-PAMSV----WAVAILPNSD-IVT--GSSDG------ 218 (557)
Q Consensus 162 ~V~~l~~--~~~~l~s~s~----Dg~I~iwd~~~~~--~-~~~-~~~~v----~~v~~~p~g~-l~s--g~~Dg------ 218 (557)
.+.+++| +|++|++.+. +..|++||+.+.+ . +.. +...+ ..++|+|+|+ |+. +..++
T Consensus 256 ~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~ 335 (723)
T 1xfd_A 256 YITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFY 335 (723)
T ss_dssp EEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEE
T ss_pred eeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCccee
Confidence 7888999 6777766643 3579999976652 2 222 22333 3789999998 553 45677
Q ss_pred cEEEEe-cCCCC---cchhHHHhcccceeEE-EeccCCCceeEEEEeCC--CcEEEEecCCC
Q psy7057 219 IVRVFS-ANPDR---QAEDAVQAQYAEEVKK-LKSANEQEIGGVKVSDD--GIVRVFSANPD 273 (557)
Q Consensus 219 ~I~iwd-~~~~~---~~~~~~~~~~~~~v~~-l~~~~~~~~~~vs~s~D--G~IrvW~~~~~ 273 (557)
.|++|+ ...+. .... ......+.. +.+.++.....+++..| +.+++|+++..
T Consensus 336 ~l~~~d~~~~~~~~~~~~l---~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~~ 394 (723)
T 1xfd_A 336 HITVSSSQPNSSNDNIQSI---TSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTV 394 (723)
T ss_dssp EEEEECSSCCSSSCCCCBS---CCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECSS
T ss_pred EEEEEeccCCCCccceeEe---ecCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeCC
Confidence 466666 33333 2111 111222333 45666666544555566 89999998754
No 147
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.69 E-value=2.3e-15 Score=176.08 Aligned_cols=252 Identities=10% Similarity=0.026 Sum_probs=190.3
Q ss_pred CcccEEEEEEc-CCCc-EEEEECCCcEEEEcCCC----------------CCCCCCCCEEEEEECCCeEE-EEECCCCeE
Q psy7057 11 HSMDVRSLSVT-PDGC-ILSASRDKSAKLWKPND----------------LSPGAKVNTLLSASWDMTAK-LWCLESQQC 71 (557)
Q Consensus 11 H~~~V~~l~~s-pdg~-l~sgs~Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~Dg~i~-iwd~~~~~~ 71 (557)
|...|.+++|+ |||+ |++++ ++.|.+|++.. +.++ ++..|+.++.+..+. +|++.+++.
T Consensus 294 ~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~ 371 (1045)
T 1k32_A 294 SIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLKVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKA 371 (1045)
T ss_dssp ECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEEECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCE
T ss_pred cccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceEEccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCc
Confidence 45579999999 9998 77766 88999999765 3455 678899999888888 999988765
Q ss_pred EEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeC-CCcEEEEEeCCCCCEEEEEEeCCCe-EEEEECC---------
Q psy7057 72 KLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSE-EGEFLKTLTGHTDCVRGLAVLNDTD-FVSCSND--------- 139 (557)
Q Consensus 72 ~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~-~~~~~~~l~~h~~~V~~l~~~~~~~-lvs~s~D--------- 139 (557)
. .+.+|...+.+++|+|++ .|++++.++.|++||. +++....+.+|...+.+++|+|+++ +++++.+
T Consensus 372 ~-~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~ 450 (1045)
T 1k32_A 372 E-KFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYV 450 (1045)
T ss_dssp E-ECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCC
T ss_pred e-EecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCC
Confidence 4 344788899999999999 8999999999999995 5566666668999999999999988 5566554
Q ss_pred -CeEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC--------------------------
Q psy7057 140 -ASIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ-------------------------- 190 (557)
Q Consensus 140 -g~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~-------------------------- 190 (557)
+.|++||+.+++ +..+..|...+.+++| +|+.|+.++.++...+|+....
T Consensus 451 ~~~i~l~d~~~g~-~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (1045)
T 1k32_A 451 MQAIHVYDMEGRK-IFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLV 529 (1045)
T ss_dssp EEEEEEEETTTTE-EEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEECSSSSCEECCSCBEEEEEESSTTCCCGGGCC
T ss_pred CCeEEEEECCCCc-EEEeeCCCcccCCceEcCCCCEEEEEecccCCcCcchhccccccccCceeEEEEeCCCCCCccccC
Confidence 489999999887 6777888888999999 7888999888776666652110
Q ss_pred --------------------ceEeeCCccEEEEEEcCCCc-EEE-------------EEcCCcEEEEecCCCCcchhHHH
Q psy7057 191 --------------------NSFMIPAMSVWAVAILPNSD-IVT-------------GSSDGIVRVFSANPDRQAEDAVQ 236 (557)
Q Consensus 191 --------------------~~~~~~~~~v~~v~~~p~g~-l~s-------------g~~Dg~I~iwd~~~~~~~~~~~~ 236 (557)
..+..+...+..++++|++. +++ ......|++||+.+++....
T Consensus 530 ~~~~~~~~~~~d~~g~~~~~~~l~~~~~~~~~~~~s~dg~~~~~~~~~g~~~~~~~~~~~~~~l~~~d~~~~~~~~l--- 606 (1045)
T 1k32_A 530 PRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKVTEV--- 606 (1045)
T ss_dssp CGGGSCCCCCCCCTTGGGGCEECSCCCBCEEEEEECSSEEEEEECCCCCSHHHHHHCCCCCEEEEEEETTTCCEEEE---
T ss_pred cCccccccccccccCHhHceEEcCCCCCChhheEEcCCCeEEEEecccCcccccccccCCCceEEEEECCCCcEEEe---
Confidence 12223456788999999998 543 12245688888877654321
Q ss_pred hcccceeEEEeccCCCceeEEEEeCCCcEEEEecCCCh
Q psy7057 237 AQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPDR 274 (557)
Q Consensus 237 ~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~~~ 274 (557)
...+..+.+.++... +++++.| .|++|++.+++
T Consensus 607 ---~~~v~~~~~S~DG~~-l~~~~~~-~i~~~d~~~~~ 639 (1045)
T 1k32_A 607 ---KNNLTDLRLSADRKT-VMVRKDD-GKIYTFPLEKP 639 (1045)
T ss_dssp ---EEEEEEEEECTTSCE-EEEEETT-SCEEEEESSCT
T ss_pred ---ecCcceEEECCCCCE-EEEEcCC-cEEEEeCccCc
Confidence 144566666666554 5555555 89999997766
No 148
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.69 E-value=8.1e-16 Score=168.13 Aligned_cols=245 Identities=12% Similarity=0.108 Sum_probs=167.1
Q ss_pred cccEEEEEEcCCCc-EEEEEC-CCcEEEEcCCC----------------CCCCCCCCEEEEEEC---CCeEEEEECCC--
Q psy7057 12 SMDVRSLSVTPDGC-ILSASR-DKSAKLWKPND----------------LSPGAKVNTLLSASW---DMTAKLWCLES-- 68 (557)
Q Consensus 12 ~~~V~~l~~spdg~-l~sgs~-Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~---Dg~i~iwd~~~-- 68 (557)
..+|.+++|+|||+ |++++. ||+++||++.. +.++|+ ..+++++. +...++|.+..
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~ 99 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSR 99 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETTS
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEEcCCCcEeeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEeccC
Confidence 55899999999998 887776 99999999754 456666 67777775 45556655432
Q ss_pred -CeEEEEEcccCCcEEEEEEcCCC--EEEEEECCCeEEEEeCCCcEEEEEeCCCCCEEEEEEeCCCe-EEEEECC----C
Q psy7057 69 -QQCKLTIRQHEMAVWGVIQLANG--IIVTGCADKTIKLHSEEGEFLKTLTGHTDCVRGLAVLNDTD-FVSCSND----A 140 (557)
Q Consensus 69 -~~~~~~l~~h~~~V~~l~~~~~~--~l~sgs~dg~I~vwd~~~~~~~~l~~h~~~V~~l~~~~~~~-lvs~s~D----g 140 (557)
+... .+..+. .+...+|+|++ .+++.+.++.+.+||..+.....+..+.. .+++|+|+|+ +++++.+ .
T Consensus 100 ~g~~~-~l~~~~-~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~--~~~~~spDG~~la~~~~~~~~~~ 175 (582)
T 3o4h_A 100 PGEEQ-RLEAVK-PMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPG--FGFVSDIRGDLIAGLGFFGGGRV 175 (582)
T ss_dssp TTCCE-ECTTSC-SBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESS--CEEEEEEETTEEEEEEEEETTEE
T ss_pred CCccc-cccCCC-CceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCC--ceEEECCCCCEEEEEEEcCCCCe
Confidence 2222 343322 23345666665 44555555555699965444444444433 7899999988 5556666 7
Q ss_pred eEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCC--eEEEEECCCC--ceEeeCCccEEEEE--------Ec
Q psy7057 141 SIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQ--CVCVYQNKAQ--NSFMIPAMSVWAVA--------IL 206 (557)
Q Consensus 141 ~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg--~I~iwd~~~~--~~~~~~~~~v~~v~--------~~ 206 (557)
.|++||+.+++.. .+..|...+.+++| +|+.|+++..++ .|++||+.+. ..+..+...+..++ |+
T Consensus 176 ~i~~~d~~~g~~~-~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 254 (582)
T 3o4h_A 176 SLFTSNLSSGGLR-VFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVEDLELPSKDFSSYRPTAITWLGYL 254 (582)
T ss_dssp EEEEEETTTCCCE-EECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEEECCCSCSHHHHHCCSEEEEEEEC
T ss_pred EEEEEcCCCCCce-EeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEEEccCCCcChhhhhhccccceeEc
Confidence 8999999888754 67788889999999 788999888888 8999997665 33334444555566 99
Q ss_pred CCCc-EEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCc---EEEEecC
Q psy7057 207 PNSD-IVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGI---VRVFSAN 271 (557)
Q Consensus 207 p~g~-l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~---IrvW~~~ 271 (557)
|+|. +++++.|+++++|++ ++... .....+..+.+. + ...+++++.+.. +.+|+..
T Consensus 255 pdg~~~~~~~~~g~~~l~~~--g~~~~-----~~~~~v~~~~~s-d-g~~l~~~s~~~~p~~l~~~d~~ 314 (582)
T 3o4h_A 255 PDGRLAVVARREGRSAVFID--GERVE-----APQGNHGRVVLW-R-GKLVTSHTSLSTPPRIVSLPSG 314 (582)
T ss_dssp TTSCEEEEEEETTEEEEEET--TEEEC-----CCSSEEEEEEEE-T-TEEEEEEEETTEEEEEEEETTC
T ss_pred CCCcEEEEEEcCCcEEEEEE--CCeec-----cCCCceEEEEec-C-CEEEEEEcCCCCCCeEEEEcCC
Confidence 9998 778889999999999 43322 223456666666 3 444566666643 5555543
No 149
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.69 E-value=2.8e-15 Score=167.83 Aligned_cols=258 Identities=12% Similarity=0.042 Sum_probs=172.6
Q ss_pred EEEeccCcc---cEEEEEEcCCCc-EEEEECC---------CcEEEEcCCC------------------CCCCCCCCEEE
Q psy7057 5 STALYGHSM---DVRSLSVTPDGC-ILSASRD---------KSAKLWKPND------------------LSPGAKVNTLL 53 (557)
Q Consensus 5 ~~~l~gH~~---~V~~l~~spdg~-l~sgs~D---------g~V~iWd~~~------------------~~~~~~~~~l~ 53 (557)
...+.+|.. .|.+++|||||+ |++++.+ +.+.+||+.+ ++++|+++.|+
T Consensus 50 ~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la 129 (723)
T 1xfd_A 50 TVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLI 129 (723)
T ss_dssp EEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEE
T ss_pred EEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCccccccccccEECCCCCEEE
Confidence 455666665 499999999999 8888764 7888999765 56788999999
Q ss_pred EEECCCeEEEEECCCCeEEEEEcccCCcE------------------EEEEEcCCC-EEEEEECCC--------------
Q psy7057 54 SASWDMTAKLWCLESQQCKLTIRQHEMAV------------------WGVIQLANG-IIVTGCADK-------------- 100 (557)
Q Consensus 54 sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V------------------~~l~~~~~~-~l~sgs~dg-------------- 100 (557)
.++. +.|++|++.+++.......+...+ .+++|+|+| .|++++.|+
T Consensus 130 ~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~ 208 (723)
T 1xfd_A 130 FIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGS 208 (723)
T ss_dssp EEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSS
T ss_pred EEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCc
Confidence 9986 799999999887766665544333 789999999 788777543
Q ss_pred --------------------eEEEEeCCC-cEEEEEeCC------CCCEEEEEEeCCCeEE-EEE----CCCeEEEEECC
Q psy7057 101 --------------------TIKLHSEEG-EFLKTLTGH------TDCVRGLAVLNDTDFV-SCS----NDASIRVWDST 148 (557)
Q Consensus 101 --------------------~I~vwd~~~-~~~~~l~~h------~~~V~~l~~~~~~~lv-s~s----~Dg~I~vwd~~ 148 (557)
.|++||..+ +....+..+ ...+.+++|+|+++++ +.+ .+..|++||+.
T Consensus 209 ~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~ 288 (723)
T 1xfd_A 209 IYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDAT 288 (723)
T ss_dssp SSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETT
T ss_pred CCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCC
Confidence 789999544 334566554 5679999999999855 443 23579999999
Q ss_pred CCeEEEEEeC-CCCcEE----EEEE--cCCEEEE--EeCCC------eEEEEE-CCCC-----ceEeeCCccEEE-EEEc
Q psy7057 149 TGKCVHTMYG-HPNFIY----SVAA--HGDLITS--GGEDQ------CVCVYQ-NKAQ-----NSFMIPAMSVWA-VAIL 206 (557)
Q Consensus 149 ~~~~~~~~~~-h~~~V~----~l~~--~~~~l~s--~s~Dg------~I~iwd-~~~~-----~~~~~~~~~v~~-v~~~ 206 (557)
++++...+.. +...+. +++| +|+.|+. +..++ .|.+|| .... ..+......+.. ++|+
T Consensus 289 ~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~s 368 (723)
T 1xfd_A 289 TGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYD 368 (723)
T ss_dssp TCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEE
T ss_pred CCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEc
Confidence 9987776643 333332 6677 6775553 55677 577777 2322 233322334544 6999
Q ss_pred CCCc-EEEEEcC---CcEEEEecCCCCcchhHHHhc---ccceeEEEeccCCCceeEEEEeCCC
Q psy7057 207 PNSD-IVTGSSD---GIVRVFSANPDRQAEDAVQAQ---YAEEVKKLKSANEQEIGGVKVSDDG 263 (557)
Q Consensus 207 p~g~-l~sg~~D---g~I~iwd~~~~~~~~~~~~~~---~~~~v~~l~~~~~~~~~~vs~s~DG 263 (557)
|+|+ |+..+.+ +.++||+++.........+.. +...+..+.+.++....+++++.++
T Consensus 369 pdg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~spdg~~l~~~~~~~~ 432 (723)
T 1xfd_A 369 EKGNKIYFLSTEDLPRRRQLYSANTVGNFNRQCLSCDLVENCTYFSASFSHSMDFFLLKCEGPG 432 (723)
T ss_dssp TTTTEEEEEESSSCTTCCEEEEECSSTTCCCBCSSTTSSSSCCCCEEEECTTSSEEEEECCSSS
T ss_pred CCCCEEEEEEcCCCCcceEEEEEeCCCCCCcceecccccCCCCeEEEEECCCCCEEEEEccCCC
Confidence 9998 6555554 789999986432110001111 2334555666666665555555443
No 150
>3l3f_X Protein DOA1, DOA1/UFD3; armadillo-like repeat structure, nucleus, UBL conjugation PA protein binding; 1.90A {Saccharomyces cerevisiae}
Probab=99.68 E-value=2.1e-17 Score=165.53 Aligned_cols=89 Identities=44% Similarity=0.870 Sum_probs=64.3
Q ss_pred EEecCCCceeEeeEEecCCCCccccCCeeEecceeeeeEEEEecCCCCCcccCCCccCCChHHHHHHHHHHcCCChHHHH
Q psy7057 336 SWSEASREWNKLGDVMGSAGGTQESSGKVLYQGKEYDFVFSVDIEEGKPPLKLPYNVSEDPWHAAQAFIHTHHLSQMFLE 415 (557)
Q Consensus 336 ~w~~~~~~W~~~g~v~~~~~~~~~~~~~~~~~g~~~d~v~~v~~~~g~~~~~l~~n~~~~~~~~a~~~~~~~~l~~~~~~ 415 (557)
+|+ +++|+++|+|||+.. ..+++|+.|+|++|||||+||++||++++|||||.++|||.+|++||++|+||++|++
T Consensus 1 qw~--~~~W~~iG~vv~~~~--~~~~~k~~~~g~~yDyvf~vdi~~g~~~~klpyN~~~np~~~A~~F~~~~~l~~~y~~ 76 (362)
T 3l3f_X 1 QFS--NSSWKKVGDVVGAGA--TGNDKKIEFEGKTYDYVFDVDIEDGKPPLKLPINVSDNPYTAADNFLARYELPMSYRD 76 (362)
T ss_dssp --------------------------CCEEETTEEESEEEEECCSTTSCCEEEEECTTSCHHHHHHHHHHHTTCCGGGHH
T ss_pred CCC--CCcceEeEEEECCCC--CCCCCceeecCcccceEEEEEcCCCCccccCCCcCCCCHHHHHHHHHHHcCCCHHHHH
Confidence 476 599999999998631 1257899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCC
Q psy7057 416 QVANFIMTNSKSK 428 (557)
Q Consensus 416 ~v~~~i~~~~~~~ 428 (557)
||++||.+|+++.
T Consensus 77 ~i~~fi~~n~~~~ 89 (362)
T 3l3f_X 77 QVVQFILKNTNGI 89 (362)
T ss_dssp HHHHHHHHHCC--
T ss_pred HHHHHHHhcCCCc
Confidence 9999999999865
No 151
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.68 E-value=1.1e-14 Score=147.90 Aligned_cols=218 Identities=12% Similarity=0.141 Sum_probs=154.8
Q ss_pred ccCcccEEEEEEcCCCcEEEEEC---CCcEEEEcCCC------------------CCCCCCCCEEEEEE-CCCeEEEEEC
Q psy7057 9 YGHSMDVRSLSVTPDGCILSASR---DKSAKLWKPND------------------LSPGAKVNTLLSAS-WDMTAKLWCL 66 (557)
Q Consensus 9 ~gH~~~V~~l~~spdg~l~sgs~---Dg~V~iWd~~~------------------~~~~~~~~~l~sgs-~Dg~i~iwd~ 66 (557)
..+...+..++|+|||+|++++. ++.|.+|++.. +++++++++|++++ .++++.+|++
T Consensus 36 ~~~~~~p~~~a~spdg~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~ 115 (347)
T 3hfq_A 36 LAATQNPTYLALSAKDCLYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKI 115 (347)
T ss_dssp EEECSCCCCEEECTTCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred eeccCCcceEEEccCCeEEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEe
Confidence 34556778899999999665554 68999999854 56678899898888 6799999999
Q ss_pred C-CC--eEEEEEcc---------cCCcEEEEEEcCCC-EEEEEECCCeEEEEeCC--CcEE--EEEeC-CCCCEEEEEEe
Q psy7057 67 E-SQ--QCKLTIRQ---------HEMAVWGVIQLANG-IIVTGCADKTIKLHSEE--GEFL--KTLTG-HTDCVRGLAVL 128 (557)
Q Consensus 67 ~-~~--~~~~~l~~---------h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~--~~~~--~~l~~-h~~~V~~l~~~ 128 (557)
. ++ +.+..+.. +...+.+++|+|++ ++++...++.|++|+.. +... ..+.. ....+..++|+
T Consensus 116 ~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~s 195 (347)
T 3hfq_A 116 AADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFS 195 (347)
T ss_dssp CTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEEC
T ss_pred CCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEEC
Confidence 6 33 33333322 12348899999998 66666678899999954 4332 22232 23468899999
Q ss_pred CCCe-EE-EEECCCeEEEEECCC--CeE--EEEEeCCC------CcEEEEEE--cCCEE-EEEeCCCeEEEEECC---CC
Q psy7057 129 NDTD-FV-SCSNDASIRVWDSTT--GKC--VHTMYGHP------NFIYSVAA--HGDLI-TSGGEDQCVCVYQNK---AQ 190 (557)
Q Consensus 129 ~~~~-lv-s~s~Dg~I~vwd~~~--~~~--~~~~~~h~------~~V~~l~~--~~~~l-~s~s~Dg~I~iwd~~---~~ 190 (557)
|+++ ++ ++..++.|++|++.. ++. +..+.... ..+..+++ ++++| +++..++.|.+|++. ..
T Consensus 196 pdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~ 275 (347)
T 3hfq_A 196 PDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHL 275 (347)
T ss_dssp TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCE
T ss_pred CCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcE
Confidence 9987 44 456789999999764 543 33443333 35788888 67766 566678999999975 22
Q ss_pred ---ceEeeCCccEEEEEEcCCCc-EEEEEc-CCcEEEEecC
Q psy7057 191 ---NSFMIPAMSVWAVAILPNSD-IVTGSS-DGIVRVFSAN 226 (557)
Q Consensus 191 ---~~~~~~~~~v~~v~~~p~g~-l~sg~~-Dg~I~iwd~~ 226 (557)
..+..+...+..++|+|+|+ |++++. ++.|.+|+++
T Consensus 276 ~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d 316 (347)
T 3hfq_A 276 TLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARD 316 (347)
T ss_dssp EEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred EEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEe
Confidence 23334455688999999998 666665 5899999664
No 152
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.68 E-value=2.5e-15 Score=150.90 Aligned_cols=239 Identities=10% Similarity=0.024 Sum_probs=167.1
Q ss_pred EEEEECCCcEEEEcCCC------------------CCCCCCCCEE-EEEECCCeEEEEECCCCeEEEEEcc-c----CCc
Q psy7057 26 ILSASRDKSAKLWKPND------------------LSPGAKVNTL-LSASWDMTAKLWCLESQQCKLTIRQ-H----EMA 81 (557)
Q Consensus 26 l~sgs~Dg~V~iWd~~~------------------~~~~~~~~~l-~sgs~Dg~i~iwd~~~~~~~~~l~~-h----~~~ 81 (557)
|++++.+++|++||+.+ +.++++++.+ ++++.++.|.+||+.+++.+..+.. + ...
T Consensus 4 ~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~ 83 (337)
T 1pby_B 4 ILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKS 83 (337)
T ss_dssp EEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEEC
T ss_pred EEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCccccccc
Confidence 77889999999998765 2245667665 4555678999999999988777653 2 125
Q ss_pred EEEEEEcCCC-EEEEEE------------CCCeEEEEeCC-CcEEEEEeCCCCCEEEEEEeCCCe-EEEEECCCeEEEEE
Q psy7057 82 VWGVIQLANG-IIVTGC------------ADKTIKLHSEE-GEFLKTLTGHTDCVRGLAVLNDTD-FVSCSNDASIRVWD 146 (557)
Q Consensus 82 V~~l~~~~~~-~l~sgs------------~dg~I~vwd~~-~~~~~~l~~h~~~V~~l~~~~~~~-lvs~s~Dg~I~vwd 146 (557)
+.+++|+|++ .+++++ .++.|.+||.. ++.+..+.. ...+.+++|+|++. ++++ ++.|.+||
T Consensus 84 ~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i~~~d 160 (337)
T 1pby_B 84 LFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGL--GRDLHVMD 160 (337)
T ss_dssp TTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEE--SSSEEEEE
T ss_pred ccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEe--CCeEEEEE
Confidence 6689999998 777775 57999999954 455555553 55688899999987 5555 68999999
Q ss_pred CCCCeEEEEEeCCC--CcEEEEEEcCCEEEEEe-CCC-----------------------eEEEEECCCCce----EeeC
Q psy7057 147 STTGKCVHTMYGHP--NFIYSVAAHGDLITSGG-EDQ-----------------------CVCVYQNKAQNS----FMIP 196 (557)
Q Consensus 147 ~~~~~~~~~~~~h~--~~V~~l~~~~~~l~s~s-~Dg-----------------------~I~iwd~~~~~~----~~~~ 196 (557)
+.+++.+..+..+. ..+ .+..++..++..+ .++ .|.+||..+.+. +..+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~-~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~ 239 (337)
T 1pby_B 161 PEAGTLVEDKPIQSWEAET-YAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIM 239 (337)
T ss_dssp TTTTEEEEEECSTTTTTTT-BCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEEC
T ss_pred CCCCcEeeeeeccccCCCc-eeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCC
Confidence 99999888776543 222 2233555443333 222 468999776632 3344
Q ss_pred CccEEEEEEcCCCc-EEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecCCCh
Q psy7057 197 AMSVWAVAILPNSD-IVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPDR 274 (557)
Q Consensus 197 ~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~~~ 274 (557)
...+.+++|+|+++ ++++ ++.|++||+.+.+...... ....+..+.+.++.. .+++++.|+.|++|++...+
T Consensus 240 ~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~---~~~~~~~~~~s~dg~-~l~~~~~~~~i~v~d~~~~~ 312 (337)
T 1pby_B 240 DVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVP---LPHSYYSVNVSTDGS-TVWLGGALGDLAAYDAETLE 312 (337)
T ss_dssp SSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEE---CSSCCCEEEECTTSC-EEEEESBSSEEEEEETTTCC
T ss_pred CCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceec---CCCceeeEEECCCCC-EEEEEcCCCcEEEEECcCCc
Confidence 55788999999998 5555 7999999998765543221 123355666666655 45556889999999987653
No 153
>3pst_A Protein DOA1; protein degradation, CDC48, ubiquitin, nuclear protein; 2.00A {Saccharomyces cerevisiae} PDB: 3psp_A
Probab=99.68 E-value=2.6e-17 Score=167.12 Aligned_cols=66 Identities=47% Similarity=0.888 Sum_probs=61.9
Q ss_pred eeEecceeeeeEEEEecCCCCCcccCCCccCCChHHHHHHHHHHcCCChHHHHHHHHHHHhcCCCC
Q psy7057 363 KVLYQGKEYDFVFSVDIEEGKPPLKLPYNVSEDPWHAAQAFIHTHHLSQMFLEQVANFIMTNSKSK 428 (557)
Q Consensus 363 ~~~~~g~~~d~v~~v~~~~g~~~~~l~~n~~~~~~~~a~~~~~~~~l~~~~~~~v~~~i~~~~~~~ 428 (557)
|+.|+|++|||||+||++||+|++|||||.++|||.+|++||.+|+||++|++||++||.+|+++.
T Consensus 87 k~~~~Gk~YDyvf~Vdi~~g~p~lkLpyN~~~np~~~A~~Fi~~~~L~~~y~~qi~~FI~~N~~~~ 152 (425)
T 3pst_A 87 KIEFEGKTYDYVFDVDIEDGKPPLKLPINVSDNPYTAADNFLARYELPMSYRDQVVQLILKNTNGI 152 (425)
T ss_dssp CEEETTEEESEEEEECCSTTCCCEEEEECTTCCHHHHHHHHHHHHTCCGGGHHHHHHHHHHHC---
T ss_pred ceeecCcccceEEEEEcCCCCccccCCccCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCc
Confidence 578999999999999999999999999999999999999999999999999999999999999865
No 154
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.67 E-value=1.2e-14 Score=146.25 Aligned_cols=221 Identities=9% Similarity=0.042 Sum_probs=160.6
Q ss_pred CCEEEEEECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEEC-CCeEEEEeC-CCcE-EEEEeCCCCCEEE
Q psy7057 49 VNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCA-DKTIKLHSE-EGEF-LKTLTGHTDCVRG 124 (557)
Q Consensus 49 ~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~-dg~I~vwd~-~~~~-~~~l~~h~~~V~~ 124 (557)
...+++++.+++|++||+.+++....+..+...+ +++|+|++ .+++++. ++.|.+||. +++. ...+..+..+..+
T Consensus 10 ~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~ 88 (331)
T 3u4y_A 10 NFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMAD 88 (331)
T ss_dssp CEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCC
T ss_pred CEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccc
Confidence 3457788889999999999999888887777777 99999998 4555555 899999994 5555 6666667666666
Q ss_pred EEEeCCCeEEEEECCC----eEEEEECCCCeEEEEEeCCCCcEEEEEE--cCC-EEEEEeCCCe-EEEEECCCCc-----
Q psy7057 125 LAVLNDTDFVSCSNDA----SIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGD-LITSGGEDQC-VCVYQNKAQN----- 191 (557)
Q Consensus 125 l~~~~~~~lvs~s~Dg----~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~-~l~s~s~Dg~-I~iwd~~~~~----- 191 (557)
++++|++.++.++.+. .|.+||+.+++.+..+..+ ....++++ +++ +++++..++. |.+|++....
T Consensus 89 ~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~ 167 (331)
T 3u4y_A 89 VDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIP-YDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDT 167 (331)
T ss_dssp EEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECC-TTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEE
T ss_pred eEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECC-CCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeec
Confidence 9999998744344443 8999999999988887644 45688888 565 4555566688 9999965421
Q ss_pred --eEeeCCccEEEEEEcCCCc-EEE-EEcCCcEEEEecCCCCc---chhHHHhcccceeEEEeccCCCceeEEEEeCCCc
Q psy7057 192 --SFMIPAMSVWAVAILPNSD-IVT-GSSDGIVRVFSANPDRQ---AEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGI 264 (557)
Q Consensus 192 --~~~~~~~~v~~v~~~p~g~-l~s-g~~Dg~I~iwd~~~~~~---~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~ 264 (557)
........+..++|+|+|+ +++ +..++.|++|++.+++. ..... ....+..+.+.++.....++...++.
T Consensus 168 ~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~---~~~~~~~~~~spdg~~l~v~~~~~~~ 244 (331)
T 3u4y_A 168 GQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVG---TNNLPGTIVVSRDGSTVYVLTESTVD 244 (331)
T ss_dssp EEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEE---CSSCCCCEEECTTSSEEEEECSSEEE
T ss_pred CCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeecc---CCCCCceEEECCCCCEEEEEEcCCCE
Confidence 1112345689999999998 544 44689999999987765 22111 12344566677776655666667889
Q ss_pred EEEEecCCCh
Q psy7057 265 VRVFSANPDR 274 (557)
Q Consensus 265 IrvW~~~~~~ 274 (557)
|.+|+...++
T Consensus 245 i~~~d~~~~~ 254 (331)
T 3u4y_A 245 VFNFNQLSGT 254 (331)
T ss_dssp EEEEETTTTE
T ss_pred EEEEECCCCc
Confidence 9999987653
No 155
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.67 E-value=9.8e-15 Score=147.82 Aligned_cols=226 Identities=12% Similarity=0.056 Sum_probs=169.0
Q ss_pred CCCCCCCCEEEEEEC-------CCeEEEEECCCCeEEEEEcccCCcEEEEEEcCCC--EEEEEECCCeEEEEe-CCCcEE
Q psy7057 43 LSPGAKVNTLLSASW-------DMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG--IIVTGCADKTIKLHS-EEGEFL 112 (557)
Q Consensus 43 ~~~~~~~~~l~sgs~-------Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~--~l~sgs~dg~I~vwd-~~~~~~ 112 (557)
+.++++++.+++++. ++.|.+||+.+++.+..+... ..+.+++++|++ .+++...++.|.+|| .+++.+
T Consensus 46 ~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~ 124 (353)
T 3vgz_A 46 MAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHND-LKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVK 124 (353)
T ss_dssp EEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEES-SCCCSEEEETTTTEEEEEETTTTEEEEEETTTCCEE
T ss_pred eEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecC-CCcceEEECCCCCEEEEEecCCCEEEEEeCCCCeeE
Confidence 567778888888874 568999999999988887643 446789999988 455556689999999 467777
Q ss_pred EEEeCCCC---------CEEEEEEeCCCe-EEEEE--CCCeEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeC
Q psy7057 113 KTLTGHTD---------CVRGLAVLNDTD-FVSCS--NDASIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGE 178 (557)
Q Consensus 113 ~~l~~h~~---------~V~~l~~~~~~~-lvs~s--~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~ 178 (557)
..+..+.. .+.+++++|++. +++++ .++.|.+||+.+++.+..+..+...+.++++ +++.+++++.
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~ 204 (353)
T 3vgz_A 125 GRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNA 204 (353)
T ss_dssp EEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECT
T ss_pred EEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcC
Confidence 77765442 278999999976 44444 5789999999999999888756666777777 7788999999
Q ss_pred CCeEEEEECCCCc---eEee----CCccEEEEEEcCCCc-EEEEE-cCCcEEEEecCCCCcchhHHHhcccceeEEEecc
Q psy7057 179 DQCVCVYQNKAQN---SFMI----PAMSVWAVAILPNSD-IVTGS-SDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSA 249 (557)
Q Consensus 179 Dg~I~iwd~~~~~---~~~~----~~~~v~~v~~~p~g~-l~sg~-~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~ 249 (557)
++.|.+||..+.. .+.. +...+.+++++|+++ +++++ .++.|.+||..+++........ ....+.+.
T Consensus 205 ~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~----~~~~~~~s 280 (353)
T 3vgz_A 205 DGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAP----ESLAVLFN 280 (353)
T ss_dssp TSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECS----SCCCEEEE
T ss_pred CCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcC----CCceEEEC
Confidence 9999999987763 2332 345688899999998 55554 4599999999877654322211 11345566
Q ss_pred CCCceeEEEEeCCCcEEEEecCCC
Q psy7057 250 NEQEIGGVKVSDDGIVRVFSANPD 273 (557)
Q Consensus 250 ~~~~~~~vs~s~DG~IrvW~~~~~ 273 (557)
+......++...++.|.+|+....
T Consensus 281 ~dg~~l~v~~~~~~~v~~~d~~~~ 304 (353)
T 3vgz_A 281 PARNEAYVTHRQAGKVSVIDAKSY 304 (353)
T ss_dssp TTTTEEEEEETTTTEEEEEETTTT
T ss_pred CCCCEEEEEECCCCeEEEEECCCC
Confidence 666656677778999999997754
No 156
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.66 E-value=1.3e-14 Score=145.65 Aligned_cols=223 Identities=10% Similarity=0.053 Sum_probs=160.7
Q ss_pred EEEEEecc-Ccc-cEEEEEEcCCCc-E-EEEECCCcEEEEcCCC---------------------CCCCCCCCEEEEEE-
Q psy7057 3 KLSTALYG-HSM-DVRSLSVTPDGC-I-LSASRDKSAKLWKPND---------------------LSPGAKVNTLLSAS- 56 (557)
Q Consensus 3 kl~~~l~g-H~~-~V~~l~~spdg~-l-~sgs~Dg~V~iWd~~~---------------------~~~~~~~~~l~sgs- 56 (557)
++.+.+.. +.. .+.+++|+|+|+ + ++++.++.|.+||+.+ +.+++++++|++++
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~ 101 (337)
T 1pby_B 22 AVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYES 101 (337)
T ss_dssp EEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEE
T ss_pred cEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEec
Confidence 45555543 222 488999999996 4 4566789999999865 23456788888886
Q ss_pred -----------CCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeC-CCcEEEEEeCCCCCEE
Q psy7057 57 -----------WDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSE-EGEFLKTLTGHTDCVR 123 (557)
Q Consensus 57 -----------~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~-~~~~~~~l~~h~~~V~ 123 (557)
.++.|.+||+.+++.+..+.. ...+.+++|+|++ .++++ ++.|.+||. +++.+..+..+.. ..
T Consensus 102 ~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~-~~ 177 (337)
T 1pby_B 102 PVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSW-EA 177 (337)
T ss_dssp EEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEE--SSSEEEEETTTTEEEEEECSTTT-TT
T ss_pred ccccccccccccCceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEe--CCeEEEEECCCCcEeeeeecccc-CC
Confidence 679999999999988877764 4567789999998 56666 689999995 5566666654431 01
Q ss_pred EEEEeCCCe-EE-EEECCC-----------------------eEEEEECCCCeEE-EEEeCCCCcEEEEEE--cCCEEEE
Q psy7057 124 GLAVLNDTD-FV-SCSNDA-----------------------SIRVWDSTTGKCV-HTMYGHPNFIYSVAA--HGDLITS 175 (557)
Q Consensus 124 ~l~~~~~~~-lv-s~s~Dg-----------------------~I~vwd~~~~~~~-~~~~~h~~~V~~l~~--~~~~l~s 175 (557)
.+.++|++. ++ ++..++ .|.+||+.+++.. ..+..+...+.++++ +++++++
T Consensus 178 ~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~ 257 (337)
T 1pby_B 178 ETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFG 257 (337)
T ss_dssp TTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEE
T ss_pred CceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEE
Confidence 226778766 32 332333 4789999988764 234456677888888 6778877
Q ss_pred EeCCCeEEEEECCCCceE--eeCCccEEEEEEcCCCc-EEEEEcCCcEEEEecCCCCcc
Q psy7057 176 GGEDQCVCVYQNKAQNSF--MIPAMSVWAVAILPNSD-IVTGSSDGIVRVFSANPDRQA 231 (557)
Q Consensus 176 ~s~Dg~I~iwd~~~~~~~--~~~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~~~ 231 (557)
+ ++.|++||+.+.+.+ ......+.+++|+|+++ +++++.++.|++||+.+.+..
T Consensus 258 ~--~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~~~ 314 (337)
T 1pby_B 258 A--YNVLESFDLEKNASIKRVPLPHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKK 314 (337)
T ss_dssp E--ESEEEEEETTTTEEEEEEECSSCCCEEEECTTSCEEEEESBSSEEEEEETTTCCEE
T ss_pred e--CCeEEEEECCCCcCcceecCCCceeeEEECCCCCEEEEEcCCCcEEEEECcCCcEE
Confidence 7 799999998776322 22335678999999998 778888999999999876543
No 157
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.66 E-value=4.6e-15 Score=149.84 Aligned_cols=209 Identities=10% Similarity=0.062 Sum_probs=152.7
Q ss_pred EEEEcCCCc-EEEEECCCcEEEEcCCC-----------------CCCCCCCCEEE-EEECCCeEEEEECCCCeEEEEEcc
Q psy7057 17 SLSVTPDGC-ILSASRDKSAKLWKPND-----------------LSPGAKVNTLL-SASWDMTAKLWCLESQQCKLTIRQ 77 (557)
Q Consensus 17 ~l~~spdg~-l~sgs~Dg~V~iWd~~~-----------------~~~~~~~~~l~-sgs~Dg~i~iwd~~~~~~~~~l~~ 77 (557)
.++++++++ +++++.+++|++||+.+ +.++++++.++ ++..++.|.+||+.+++.+..+..
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~ 83 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANL 83 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEES
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEc
Confidence 456778887 77999999999999876 34566777655 555789999999999988877763
Q ss_pred cC------CcEEEEEEcCCC-EEEEEECC------------CeEEEEeCCC----cEEEEEeCCCCCEEEEEEeCCCeEE
Q psy7057 78 HE------MAVWGVIQLANG-IIVTGCAD------------KTIKLHSEEG----EFLKTLTGHTDCVRGLAVLNDTDFV 134 (557)
Q Consensus 78 h~------~~V~~l~~~~~~-~l~sgs~d------------g~I~vwd~~~----~~~~~l~~h~~~V~~l~~~~~~~lv 134 (557)
+. ..+.+++|+|++ .+++++.+ +.|.+||... ..+..+. +...+.+++|+|++.++
T Consensus 84 ~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~l~ 162 (349)
T 1jmx_B 84 SSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP-MPRQVYLMRAADDGSLY 162 (349)
T ss_dssp CCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE-CCSSCCCEEECTTSCEE
T ss_pred ccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeecc-CCCcccceeECCCCcEE
Confidence 32 236789999998 77777755 8999999432 2233444 34468899999998866
Q ss_pred EEECCCeEEEEECCCCeEEEEEeCCC------------------------------------------------------
Q psy7057 135 SCSNDASIRVWDSTTGKCVHTMYGHP------------------------------------------------------ 160 (557)
Q Consensus 135 s~s~Dg~I~vwd~~~~~~~~~~~~h~------------------------------------------------------ 160 (557)
+++. .|.+||+.+++.+..+..+.
T Consensus 163 ~~~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 240 (349)
T 1jmx_B 163 VAGP--DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDL 240 (349)
T ss_dssp EESS--SEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEET
T ss_pred EccC--cEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEec
Confidence 6544 49999999998887765332
Q ss_pred --------------CcEEEEEE---cCCEEEEEeCCCeEEEEECCCCceE--eeCCccEEEEEEcCCCc-EEEEEcCCcE
Q psy7057 161 --------------NFIYSVAA---HGDLITSGGEDQCVCVYQNKAQNSF--MIPAMSVWAVAILPNSD-IVTGSSDGIV 220 (557)
Q Consensus 161 --------------~~V~~l~~---~~~~l~s~s~Dg~I~iwd~~~~~~~--~~~~~~v~~v~~~p~g~-l~sg~~Dg~I 220 (557)
..+.++++ ++++++++ ++.|++||+.+.+.+ ......+.+++|+|+++ |++++.++.|
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~v 318 (349)
T 1jmx_B 241 KTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANLDHTYYCVAFDKKGDKLYLGGTFNDL 318 (349)
T ss_dssp TTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEECSSCCCEEEECSSSSCEEEESBSSEE
T ss_pred cCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcCCCCccceEECCCCCEEEEecCCCeE
Confidence 01223333 45577766 889999998776322 22344678999999987 7778889999
Q ss_pred EEEecCCCCc
Q psy7057 221 RVFSANPDRQ 230 (557)
Q Consensus 221 ~iwd~~~~~~ 230 (557)
++||..+.+.
T Consensus 319 ~v~d~~~~~~ 328 (349)
T 1jmx_B 319 AVFNPDTLEK 328 (349)
T ss_dssp EEEETTTTEE
T ss_pred EEEeccccce
Confidence 9999987653
No 158
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.66 E-value=1.3e-15 Score=171.05 Aligned_cols=226 Identities=9% Similarity=-0.001 Sum_probs=167.2
Q ss_pred CCCCCCCCEEEEEEC-CC-----eEEEEECCCCeEEEEEcccCC------------------------cEEEEEEcCCC-
Q psy7057 43 LSPGAKVNTLLSASW-DM-----TAKLWCLESQQCKLTIRQHEM------------------------AVWGVIQLANG- 91 (557)
Q Consensus 43 ~~~~~~~~~l~sgs~-Dg-----~i~iwd~~~~~~~~~l~~h~~------------------------~V~~l~~~~~~- 91 (557)
+.+++++++|++++. |+ +|++||+.+++....+..+.. .|.+++|+|+|
T Consensus 42 ~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpDg~ 121 (741)
T 2ecf_A 42 PKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPDAQ 121 (741)
T ss_dssp EEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEECTTSS
T ss_pred ceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECCCCC
Confidence 567889999999998 88 999999999988777765533 37899999999
Q ss_pred EEEEEECCCeEEEEeCCCc---EEEEEeCCCCCEEEEEEeCCCeE-EEEECCCeEEEEECCCCeEEEEEeCCCCc-----
Q psy7057 92 IIVTGCADKTIKLHSEEGE---FLKTLTGHTDCVRGLAVLNDTDF-VSCSNDASIRVWDSTTGKCVHTMYGHPNF----- 162 (557)
Q Consensus 92 ~l~sgs~dg~I~vwd~~~~---~~~~l~~h~~~V~~l~~~~~~~l-vs~s~Dg~I~vwd~~~~~~~~~~~~h~~~----- 162 (557)
.|++++. +.|++||..+. ....+..|...+.+++|+|+|+. ++++ ++.|++||+.+++.......+...
T Consensus 122 ~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~~~~~~~~~~~~~g~ 199 (741)
T 2ecf_A 122 RLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQMQLTADGSTTIGNGI 199 (741)
T ss_dssp EEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEEECCCCCCSSEEESC
T ss_pred EEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEEEeccCCccceeccc
Confidence 7777776 99999997665 66677788889999999999984 4554 679999999988876655444432
Q ss_pred -----------EEEEEE--cCCEEEEEeCCC---------------------------------eEEEEECCC-C--ceE
Q psy7057 163 -----------IYSVAA--HGDLITSGGEDQ---------------------------------CVCVYQNKA-Q--NSF 193 (557)
Q Consensus 163 -----------V~~l~~--~~~~l~s~s~Dg---------------------------------~I~iwd~~~-~--~~~ 193 (557)
+.+++| +|+.|++++.|+ .|++||+.+ . ..+
T Consensus 200 ~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~ 279 (741)
T 2ecf_A 200 AEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQTQWI 279 (741)
T ss_dssp CCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCCEEE
T ss_pred cceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCceEEe
Confidence 366777 788888887665 788999766 4 223
Q ss_pred e---eCCccEEEEEEcCCCc-EEEEEc-----CCcEEEEecCCCCcchhHHHhc--ccceeEEEeccCCCceeEEEEeCC
Q psy7057 194 M---IPAMSVWAVAILPNSD-IVTGSS-----DGIVRVFSANPDRQAEDAVQAQ--YAEEVKKLKSANEQEIGGVKVSDD 262 (557)
Q Consensus 194 ~---~~~~~v~~v~~~p~g~-l~sg~~-----Dg~I~iwd~~~~~~~~~~~~~~--~~~~v~~l~~~~~~~~~~vs~s~D 262 (557)
. .+...+.+++| |+|+ |++++. +..|++||+.+++......... +...+..+.+.++.. .+++++.|
T Consensus 280 ~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg~-~~~~~~~~ 357 (741)
T 2ecf_A 280 DLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDGS-ILWSSERT 357 (741)
T ss_dssp CCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTSC-EEEEECTT
T ss_pred cCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCCCe-EEEEecCC
Confidence 2 35668999999 9999 665543 5679999998776432221110 111234556666666 67788899
Q ss_pred CcEEEEecCC
Q psy7057 263 GIVRVFSANP 272 (557)
Q Consensus 263 G~IrvW~~~~ 272 (557)
|.++||.++.
T Consensus 358 g~~~l~~~~~ 367 (741)
T 2ecf_A 358 GFQHLYRIDS 367 (741)
T ss_dssp SSCEEEEECS
T ss_pred CccEEEEEcC
Confidence 9999998763
No 159
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.65 E-value=2.6e-14 Score=145.06 Aligned_cols=229 Identities=10% Similarity=0.050 Sum_probs=152.8
Q ss_pred CCCCCCCCEEEEEEC---CCeEEEEECCCCe--EEEEEcccCCcEEEEEEcCCC-EEEEEE-CCCeEEEEeCC--Cc--E
Q psy7057 43 LSPGAKVNTLLSASW---DMTAKLWCLESQQ--CKLTIRQHEMAVWGVIQLANG-IIVTGC-ADKTIKLHSEE--GE--F 111 (557)
Q Consensus 43 ~~~~~~~~~l~sgs~---Dg~i~iwd~~~~~--~~~~l~~h~~~V~~l~~~~~~-~l~sgs-~dg~I~vwd~~--~~--~ 111 (557)
++++++++ |++++. ++.|.+|++.+++ .+..+..+...+..++|+|++ .|++++ .++.|.+|+.. +. .
T Consensus 45 ~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~ 123 (347)
T 3hfq_A 45 LALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTL 123 (347)
T ss_dssp EEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEE
T ss_pred EEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeee
Confidence 56677888 555554 6899999998775 445555677888899999998 677777 78999999943 22 2
Q ss_pred EEEEeC---------CCCCEEEEEEeCCCeEE-EEECCCeEEEEECC-CCeEE--EEEeCC-CCcEEEEEE--cCCEEEE
Q psy7057 112 LKTLTG---------HTDCVRGLAVLNDTDFV-SCSNDASIRVWDST-TGKCV--HTMYGH-PNFIYSVAA--HGDLITS 175 (557)
Q Consensus 112 ~~~l~~---------h~~~V~~l~~~~~~~lv-s~s~Dg~I~vwd~~-~~~~~--~~~~~h-~~~V~~l~~--~~~~l~s 175 (557)
+..+.. +...+.+++++|+++++ +...++.|++|++. +++.. ..+..+ ...+..++| +++++++
T Consensus 124 ~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v 203 (347)
T 3hfq_A 124 TDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFL 203 (347)
T ss_dssp EEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEE
T ss_pred cceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEE
Confidence 333322 12348899999998855 55568899999998 55433 223333 336778888 6775554
Q ss_pred -EeCCCeEEEEECCC--C-----ceEeeCC------ccEEEEEEcCCCc-E-EEEEcCCcEEEEecCCC-CcchhHHHhc
Q psy7057 176 -GGEDQCVCVYQNKA--Q-----NSFMIPA------MSVWAVAILPNSD-I-VTGSSDGIVRVFSANPD-RQAEDAVQAQ 238 (557)
Q Consensus 176 -~s~Dg~I~iwd~~~--~-----~~~~~~~------~~v~~v~~~p~g~-l-~sg~~Dg~I~iwd~~~~-~~~~~~~~~~ 238 (557)
+..++.|++|++.. . ..+.... ..+..++|+|+|+ + ++...++.|++|++... ..........
T Consensus 204 ~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~ 283 (347)
T 3hfq_A 204 AGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQIST 283 (347)
T ss_dssp EETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEEC
T ss_pred EeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEec
Confidence 56788999999653 2 1222222 3488999999998 5 45666899999998732 1111111111
Q ss_pred ccceeEEEeccCCCceeEEEEeCCCcEEEEecCC
Q psy7057 239 YAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANP 272 (557)
Q Consensus 239 ~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~ 272 (557)
+...+..+.+.++.....++...++.|++|+++.
T Consensus 284 ~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~ 317 (347)
T 3hfq_A 284 EGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDL 317 (347)
T ss_dssp SSSCCCEEEECTTSSEEEEEETTTTEEEEEEECT
T ss_pred CCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeC
Confidence 2234566777777665555556679999997654
No 160
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.65 E-value=1.7e-13 Score=135.16 Aligned_cols=217 Identities=13% Similarity=0.279 Sum_probs=160.8
Q ss_pred cCcccEEEEEEcCCCcE-EEEECCCcEEEEcCCC---------------------CCC-CCCCCEEEEEEC-CCeEEEEE
Q psy7057 10 GHSMDVRSLSVTPDGCI-LSASRDKSAKLWKPND---------------------LSP-GAKVNTLLSASW-DMTAKLWC 65 (557)
Q Consensus 10 gH~~~V~~l~~spdg~l-~sgs~Dg~V~iWd~~~---------------------~~~-~~~~~~l~sgs~-Dg~i~iwd 65 (557)
+|-....++++++++.| ++.+.++.|.+||... +++ .+++..+++... ++.|++|+
T Consensus 27 g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d 106 (286)
T 1q7f_A 27 GQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYN 106 (286)
T ss_dssp TCBSCEEEEEECTTCCEEEEEGGGTEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEEC
T ss_pred CccCCCceEEECCCCCEEEEECCCCEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEEC
Confidence 45578999999999994 5557789999998765 122 233444444433 88999999
Q ss_pred CCCCeEEEEEcc-cCCcEEEEEEcCCC-EEEEEECCCeEEEEeCCCcEEEEEe--CCCCCEEEEEEeCCCeEE-EEECCC
Q psy7057 66 LESQQCKLTIRQ-HEMAVWGVIQLANG-IIVTGCADKTIKLHSEEGEFLKTLT--GHTDCVRGLAVLNDTDFV-SCSNDA 140 (557)
Q Consensus 66 ~~~~~~~~~l~~-h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~~~~~~~l~--~h~~~V~~l~~~~~~~lv-s~s~Dg 140 (557)
.+++.+..+.. +...+.++++.+++ ++++...++.|.+|+.+++.+..+. .+...+.++++++++.++ +.+.++
T Consensus 107 -~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~ 185 (286)
T 1q7f_A 107 -QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAH 185 (286)
T ss_dssp -TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGT
T ss_pred -CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCCCCEEEEeCCCCccCCcEEEEECCCCCEEEEECCCC
Confidence 56677766643 45678999999988 6666667899999998888777765 455679999999998855 556789
Q ss_pred eEEEEECCCCeEEEEEeCC--CCcEEEEEE--cCCEEEEEeCCC-eEEEEECCCC--ceEeeCC--ccEEEEEEcCCCcE
Q psy7057 141 SIRVWDSTTGKCVHTMYGH--PNFIYSVAA--HGDLITSGGEDQ-CVCVYQNKAQ--NSFMIPA--MSVWAVAILPNSDI 211 (557)
Q Consensus 141 ~I~vwd~~~~~~~~~~~~h--~~~V~~l~~--~~~~l~s~s~Dg-~I~iwd~~~~--~~~~~~~--~~v~~v~~~p~g~l 211 (557)
.|++||. +++.+..+..+ ...+..|++ +++++++...++ .|++|+.... ..+..+. ..+.+++++|+|++
T Consensus 186 ~i~~~~~-~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~g~l 264 (286)
T 1q7f_A 186 CVKVFNY-EGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQDGQLISALESKVKHAQCFDVALMDDGSV 264 (286)
T ss_dssp EEEEEET-TCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTTSCEEEEEEESSCCSCEEEEEEETTTEE
T ss_pred EEEEEcC-CCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCCCCEEEEEcccCCCCcceeEEECCCCcE
Confidence 9999996 56777777543 357888998 567777777775 9999996533 3444333 24789999999996
Q ss_pred EEEEcCCcEEEEecCCC
Q psy7057 212 VTGSSDGIVRVFSANPD 228 (557)
Q Consensus 212 ~sg~~Dg~I~iwd~~~~ 228 (557)
++++.|++|++|+....
T Consensus 265 ~vs~~~~~v~v~~~~~~ 281 (286)
T 1q7f_A 265 VLASKDYRLYIYRYVQL 281 (286)
T ss_dssp EEEETTTEEEEEECSCC
T ss_pred EEECCCCeEEEEEcccc
Confidence 65578999999998654
No 161
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.62 E-value=2.4e-14 Score=159.88 Aligned_cols=223 Identities=14% Similarity=0.146 Sum_probs=163.2
Q ss_pred EEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC-----------------------------------CCCCCCC
Q psy7057 6 TALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND-----------------------------------LSPGAKV 49 (557)
Q Consensus 6 ~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~-----------------------------------~~~~~~~ 49 (557)
..+..|...+.+++|+|||+ |++ +.++.|++|++.+ +.++|++
T Consensus 114 ~~l~~~~~~~~~~~~SpdG~~la~-~~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg 192 (706)
T 2z3z_A 114 TYLFDTNEETASLDFSPVGDRVAY-VRNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKG 192 (706)
T ss_dssp EEEECCTTCCTTCEECTTSSEEEE-EETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTS
T ss_pred EEccCCcccccCCcCCCCCCEEEE-EECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCC
Confidence 34556778899999999998 555 5789999999742 1267889
Q ss_pred CEEEEEE---------------------------------CCCeEEEEECCCCeEEEEEc--ccCCcEEEEEEcCCC-EE
Q psy7057 50 NTLLSAS---------------------------------WDMTAKLWCLESQQCKLTIR--QHEMAVWGVIQLANG-II 93 (557)
Q Consensus 50 ~~l~sgs---------------------------------~Dg~i~iwd~~~~~~~~~l~--~h~~~V~~l~~~~~~-~l 93 (557)
++|++++ .+..|++||+.+++...... .|...+.+++|+|++ .|
T Consensus 193 ~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l 272 (706)
T 2z3z_A 193 SCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENIL 272 (706)
T ss_dssp SEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEE
T ss_pred CEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEE
Confidence 9999998 45789999999987654442 467789999999999 78
Q ss_pred EEEECCC-----eEEEEeCCCc-EEEEEe--CCCC---CEEEEEEeC--CCeEE-EEECCCeEEEEECC-CCeEEEEEeC
Q psy7057 94 VTGCADK-----TIKLHSEEGE-FLKTLT--GHTD---CVRGLAVLN--DTDFV-SCSNDASIRVWDST-TGKCVHTMYG 158 (557)
Q Consensus 94 ~sgs~dg-----~I~vwd~~~~-~~~~l~--~h~~---~V~~l~~~~--~~~lv-s~s~Dg~I~vwd~~-~~~~~~~~~~ 158 (557)
++++.++ .|++||.... ....+. .+.. .+.+++|+| ++.++ +++.|+.++||.+. +++.+..+..
T Consensus 273 ~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~ 352 (706)
T 2z3z_A 273 YVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTK 352 (706)
T ss_dssp EEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCC
T ss_pred EEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCC
Confidence 8877775 8999995443 444433 2222 246789999 98854 77788999999876 6777888888
Q ss_pred CCCcEEE-EEE--cCCEEEEE-eCCC----eEEEEECCCC-ceEeeCCccEEEEEEcCCCc-EEEEEcC----CcEEEEe
Q psy7057 159 HPNFIYS-VAA--HGDLITSG-GEDQ----CVCVYQNKAQ-NSFMIPAMSVWAVAILPNSD-IVTGSSD----GIVRVFS 224 (557)
Q Consensus 159 h~~~V~~-l~~--~~~~l~s~-s~Dg----~I~iwd~~~~-~~~~~~~~~v~~v~~~p~g~-l~sg~~D----g~I~iwd 224 (557)
|...+.+ ++| +++.|+.+ +.++ .|..|+..+. .....+...+.+++|+|+|+ ++..+.+ +.|++|+
T Consensus 353 ~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d 432 (706)
T 2z3z_A 353 GEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGKTKDLTPESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTN 432 (706)
T ss_dssp SSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCCCEESCCSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEE
T ss_pred CCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCCceeccCCCceEEEEECCCCCEEEEEecCCCCCcEEEEEE
Confidence 8877876 677 66666554 4444 6777776544 22223566799999999998 5554433 5699999
Q ss_pred cCCCC
Q psy7057 225 ANPDR 229 (557)
Q Consensus 225 ~~~~~ 229 (557)
+.+++
T Consensus 433 ~~~~~ 437 (706)
T 2z3z_A 433 IGKGS 437 (706)
T ss_dssp SSSCE
T ss_pred CCCCe
Confidence 98764
No 162
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.61 E-value=9.1e-14 Score=142.00 Aligned_cols=213 Identities=11% Similarity=0.157 Sum_probs=146.7
Q ss_pred CcccEEEEEEcCCCc-EEEEECC----CcEEEEcCCC--------------------CCCCCCCCEEEEEE-CCCeEEEE
Q psy7057 11 HSMDVRSLSVTPDGC-ILSASRD----KSAKLWKPND--------------------LSPGAKVNTLLSAS-WDMTAKLW 64 (557)
Q Consensus 11 H~~~V~~l~~spdg~-l~sgs~D----g~V~iWd~~~--------------------~~~~~~~~~l~sgs-~Dg~i~iw 64 (557)
|...+..++|+|||+ |++++.+ +.|.+|++.. +++ ++++|++++ .++++.+|
T Consensus 48 ~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~ 125 (361)
T 3scy_A 48 EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVF 125 (361)
T ss_dssp ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEE
T ss_pred cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEE
Confidence 667788899999998 7788775 8999997643 222 567777776 57899999
Q ss_pred ECCCCeEEE------EEcc--------cCCcEEEEEEcCCC-EEEEEE-CCCeEEEEeCC--C-----c-E------EEE
Q psy7057 65 CLESQQCKL------TIRQ--------HEMAVWGVIQLANG-IIVTGC-ADKTIKLHSEE--G-----E-F------LKT 114 (557)
Q Consensus 65 d~~~~~~~~------~l~~--------h~~~V~~l~~~~~~-~l~sgs-~dg~I~vwd~~--~-----~-~------~~~ 114 (557)
++.....+. ...+ +...+.+++|+|++ .+++++ .++.|.+|+.. + + . ...
T Consensus 126 ~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~ 205 (361)
T 3scy_A 126 PIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAF 205 (361)
T ss_dssp EBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEE
T ss_pred EeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccce
Confidence 997543221 1111 12346889999999 455444 58899999832 2 1 1 122
Q ss_pred EeCCCCCEEEEEEeCCCe-EEEEE-CCCeEEEEECCCCeE--EEEEeC---CCCcEEEEEE--cCCEEEEEeC--CCeEE
Q psy7057 115 LTGHTDCVRGLAVLNDTD-FVSCS-NDASIRVWDSTTGKC--VHTMYG---HPNFIYSVAA--HGDLITSGGE--DQCVC 183 (557)
Q Consensus 115 l~~h~~~V~~l~~~~~~~-lvs~s-~Dg~I~vwd~~~~~~--~~~~~~---h~~~V~~l~~--~~~~l~s~s~--Dg~I~ 183 (557)
...+...+++++|+|+++ +++++ .++.|.+|++.+++. +..+.. +.....++++ ++++|+++.. ++.|.
T Consensus 206 ~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~ 285 (361)
T 3scy_A 206 KVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVA 285 (361)
T ss_dssp ECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEE
T ss_pred ecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEE
Confidence 234556789999999987 44555 689999999987754 333332 3345678888 7787766665 48999
Q ss_pred EEECC--CC--ce---EeeCCccEEEEEEcCCCc-EEEEE-cCCcEEEEecC
Q psy7057 184 VYQNK--AQ--NS---FMIPAMSVWAVAILPNSD-IVTGS-SDGIVRVFSAN 226 (557)
Q Consensus 184 iwd~~--~~--~~---~~~~~~~v~~v~~~p~g~-l~sg~-~Dg~I~iwd~~ 226 (557)
+|++. .. .. +.. ...+.+++|+|+|+ |++++ .++.|.+|.++
T Consensus 286 v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d 336 (361)
T 3scy_A 286 IFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFERD 336 (361)
T ss_dssp EEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEEC
T ss_pred EEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEEE
Confidence 99974 22 12 222 34678999999998 66666 67999997765
No 163
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.61 E-value=1.1e-14 Score=159.08 Aligned_cols=218 Identities=11% Similarity=0.067 Sum_probs=153.9
Q ss_pred CCCCCCCCEEEEEEC-CCeEEEEECCCCeEEEEEcccC-CcEEEEEEcCCCEEEEEEC---CCeEEEEe--C--CCcEEE
Q psy7057 43 LSPGAKVNTLLSASW-DMTAKLWCLESQQCKLTIRQHE-MAVWGVIQLANGIIVTGCA---DKTIKLHS--E--EGEFLK 113 (557)
Q Consensus 43 ~~~~~~~~~l~sgs~-Dg~i~iwd~~~~~~~~~l~~h~-~~V~~l~~~~~~~l~sgs~---dg~I~vwd--~--~~~~~~ 113 (557)
+.++++++.|++++. |++++||++.+++... +..|. ..+.+++|+|+.++++++. +...++|. . .+...
T Consensus 27 ~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~-lt~~~~~~~~~~~~spd~~l~~~~~~~g~~~~~l~~~~~~~~g~~~- 104 (582)
T 3o4h_A 27 LQGVVDGDKLLVVGFSEGSVNAYLYDGGETVK-LNREPINSVLDPHYGVGRVILVRDVSKGAEQHALFKVNTSRPGEEQ- 104 (582)
T ss_dssp EEEEETTTEEEEEEEETTEEEEEEEETTEEEE-CCSSCCSEECEECTTCSEEEEEEECSTTSCCEEEEEEETTSTTCCE-
T ss_pred eecCCCCCeEEEEEccCCceeEEEEcCCCcEe-eecccccccccccCCCCeEEEEeccCCCCcceEEEEEeccCCCccc-
Confidence 345678999999887 9999999997766544 44454 6899999999966666665 45566654 4 55544
Q ss_pred EEeCCCCCEEEEEEeCCC--eEEEEECCCeEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCC----CeEEEE
Q psy7057 114 TLTGHTDCVRGLAVLNDT--DFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGED----QCVCVY 185 (557)
Q Consensus 114 ~l~~h~~~V~~l~~~~~~--~lvs~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~D----g~I~iw 185 (557)
.+..+ ..+...+|+|++ .+++.+.++.+.+||+.++++......+. .++++ +|+.|++++.+ ..|++|
T Consensus 105 ~l~~~-~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~---~~~~~spDG~~la~~~~~~~~~~~i~~~ 180 (582)
T 3o4h_A 105 RLEAV-KPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPG---FGFVSDIRGDLIAGLGFFGGGRVSLFTS 180 (582)
T ss_dssp ECTTS-CSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESS---CEEEEEEETTEEEEEEEEETTEEEEEEE
T ss_pred cccCC-CCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCC---ceEEECCCCCEEEEEEEcCCCCeEEEEE
Confidence 33322 234466777775 34444445555599999887665554333 45555 89999988877 789999
Q ss_pred ECCCC--ceEeeCCccEEEEEEcCCCc-EEEEEcCC--cEEEEecCCCCcchhHHHhcccceeEEEe--------ccCCC
Q psy7057 186 QNKAQ--NSFMIPAMSVWAVAILPNSD-IVTGSSDG--IVRVFSANPDRQAEDAVQAQYAEEVKKLK--------SANEQ 252 (557)
Q Consensus 186 d~~~~--~~~~~~~~~v~~v~~~p~g~-l~sg~~Dg--~I~iwd~~~~~~~~~~~~~~~~~~v~~l~--------~~~~~ 252 (557)
|+.+. ..+..+...+.+++|+|||+ |+++..++ .|++||+.++... ....+...+..+. +.++.
T Consensus 181 d~~~g~~~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~spdg 257 (582)
T 3o4h_A 181 NLSSGGLRVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE---DLELPSKDFSSYRPTAITWLGYLPDG 257 (582)
T ss_dssp ETTTCCCEEECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE---ECCCSCSHHHHHCCSEEEEEEECTTS
T ss_pred cCCCCCceEeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE---EccCCCcChhhhhhccccceeEcCCC
Confidence 96554 66777778899999999999 77777788 8999999877654 2222333333333 66666
Q ss_pred ceeEEEEeCCCcEEEEec
Q psy7057 253 EIGGVKVSDDGIVRVFSA 270 (557)
Q Consensus 253 ~~~~vs~s~DG~IrvW~~ 270 (557)
..+++++.||++++|.+
T Consensus 258 -~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 258 -RLAVVARREGRSAVFID 274 (582)
T ss_dssp -CEEEEEEETTEEEEEET
T ss_pred -cEEEEEEcCCcEEEEEE
Confidence 66788999999999998
No 164
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.58 E-value=6.5e-15 Score=164.99 Aligned_cols=248 Identities=9% Similarity=-0.000 Sum_probs=166.0
Q ss_pred EEEEcCCCcEEEEECCCcEEEEcCCC-------------------CCCCCCCCEEEEEEC---------CCeEEEEECCC
Q psy7057 17 SLSVTPDGCILSASRDKSAKLWKPND-------------------LSPGAKVNTLLSASW---------DMTAKLWCLES 68 (557)
Q Consensus 17 ~l~~spdg~l~sgs~Dg~V~iWd~~~-------------------~~~~~~~~~l~sgs~---------Dg~i~iwd~~~ 68 (557)
+++|+|+|+++..+.|++|++||+.+ ++++|++++|++++. +++|++||+.+
T Consensus 20 ~~~~s~dg~~~~~~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~ 99 (719)
T 1z68_A 20 FPNWISGQEYLHQSADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSN 99 (719)
T ss_dssp CCEESSSSEEEEECTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTT
T ss_pred ccEECCCCeEEEEcCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCC
Confidence 78999999977777899999999865 457889999999887 78999999999
Q ss_pred CeEE--EEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeCCCcEEEEE--eCCCCCE-----------------EEEE
Q psy7057 69 QQCK--LTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSEEGEFLKTL--TGHTDCV-----------------RGLA 126 (557)
Q Consensus 69 ~~~~--~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~~~~~~~l--~~h~~~V-----------------~~l~ 126 (557)
++.+ ..+ ...+.+++|+|+| .|+.++ ++.|++|+..+.....+ .++...| .+++
T Consensus 100 g~~~~~~~l---~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~ 175 (719)
T 1z68_A 100 GEFVRGNEL---PRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALW 175 (719)
T ss_dssp TEECCSSCC---CSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEE
T ss_pred Cccccceec---CcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEE
Confidence 8762 122 3568889999999 677664 78999999543322332 2333322 4899
Q ss_pred EeCCCe-EEEEECCC----------------------------------eEEEEECCCCeEE---E-----EEeCCCCcE
Q psy7057 127 VLNDTD-FVSCSNDA----------------------------------SIRVWDSTTGKCV---H-----TMYGHPNFI 163 (557)
Q Consensus 127 ~~~~~~-lvs~s~Dg----------------------------------~I~vwd~~~~~~~---~-----~~~~h~~~V 163 (557)
|+|+|+ |++++.|. .|++||+.+++.. . .+.+|...+
T Consensus 176 wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (719)
T 1z68_A 176 WSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYF 255 (719)
T ss_dssp ECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEE
T ss_pred ECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceE
Confidence 999987 66666542 7899999887642 1 133588889
Q ss_pred EEEEE--cCCEEEEEeCC----CeEEEEE----CCCC---ceE----eeCCccEE-----EEEEcCCCc-EEE--EEcCC
Q psy7057 164 YSVAA--HGDLITSGGED----QCVCVYQ----NKAQ---NSF----MIPAMSVW-----AVAILPNSD-IVT--GSSDG 218 (557)
Q Consensus 164 ~~l~~--~~~~l~s~s~D----g~I~iwd----~~~~---~~~----~~~~~~v~-----~v~~~p~g~-l~s--g~~Dg 218 (557)
.+++| +++++++.... ..|.+|| ..+. ..+ ..+...+. .++|+|+|+ ++. +..+|
T Consensus 256 ~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g 335 (719)
T 1z68_A 256 SWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDG 335 (719)
T ss_dssp EEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTS
T ss_pred EEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCC
Confidence 99999 65556554332 2488899 6544 222 24555565 789999998 443 44556
Q ss_pred c--EEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeC----CCcEEEEecCC
Q psy7057 219 I--VRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSD----DGIVRVFSANP 272 (557)
Q Consensus 219 ~--I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~----DG~IrvW~~~~ 272 (557)
. |.+|++.++.... +......+..+.+. .....+++++. ++.+++|.++.
T Consensus 336 ~~~l~~~~~~~~~~~~---lt~~~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~~ 391 (719)
T 1z68_A 336 YKHIHYIKDTVENAIQ---ITSGKWEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRISI 391 (719)
T ss_dssp CEEEEEESSCSTTCEE---CSCSSSCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEEEC
T ss_pred ceEEEEEECCCCceEe---cccCceEEEEEEEE-eCCEEEEEEecCCCCCceEEEEEEeC
Confidence 4 6666665544221 11222334444444 44444445544 58899998764
No 165
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.57 E-value=1.7e-13 Score=138.20 Aligned_cols=220 Identities=10% Similarity=0.035 Sum_probs=152.3
Q ss_pred CCCCCCCEEEEEECCCeEEEEECCCCeEEEEEcccC-CcEEEEEEcCCC-E-EEEEECCCeEEEEeC-CCcEEEEEeCCC
Q psy7057 44 SPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHE-MAVWGVIQLANG-I-IVTGCADKTIKLHSE-EGEFLKTLTGHT 119 (557)
Q Consensus 44 ~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~-~~V~~l~~~~~~-~-l~sgs~dg~I~vwd~-~~~~~~~l~~h~ 119 (557)
++.+.+..+++++.+++|++||+.+++.+..+..+. ..+..++|+|++ . ++++..++.|.+||. +++.+..+..+.
T Consensus 6 ~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~ 85 (349)
T 1jmx_B 6 ALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSS 85 (349)
T ss_dssp CCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCC
T ss_pred cccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEccc
Confidence 455677889999999999999999999888876543 256789999998 4 455667899999995 466666665332
Q ss_pred ------CCEEEEEEeCCCe-EEEEECC------------CeEEEEECCCCe---EEEEEeCCCCcEEEEEE--cCCEEEE
Q psy7057 120 ------DCVRGLAVLNDTD-FVSCSND------------ASIRVWDSTTGK---CVHTMYGHPNFIYSVAA--HGDLITS 175 (557)
Q Consensus 120 ------~~V~~l~~~~~~~-lvs~s~D------------g~I~vwd~~~~~---~~~~~~~h~~~V~~l~~--~~~~l~s 175 (557)
..+.+++++|+++ +++++.+ +.|.+||+.+++ .+..+. +...+.++++ +++ +++
T Consensus 86 ~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~-l~~ 163 (349)
T 1jmx_B 86 VPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP-MPRQVYLMRAADDGS-LYV 163 (349)
T ss_dssp STTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE-CCSSCCCEEECTTSC-EEE
T ss_pred ccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeecc-CCCcccceeECCCCc-EEE
Confidence 2378899999986 5566644 899999998743 334444 3446778888 677 555
Q ss_pred EeCCCeEEEEECCCCc---eEeeCC-------------------------------------------------------
Q psy7057 176 GGEDQCVCVYQNKAQN---SFMIPA------------------------------------------------------- 197 (557)
Q Consensus 176 ~s~Dg~I~iwd~~~~~---~~~~~~------------------------------------------------------- 197 (557)
++. .|++||..+.+ .+....
T Consensus 164 ~~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 241 (349)
T 1jmx_B 164 AGP--DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLK 241 (349)
T ss_dssp ESS--SEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETT
T ss_pred ccC--cEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEecc
Confidence 544 49999976542 221111
Q ss_pred -------------ccEEEEEEcC-CCc-EEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCC
Q psy7057 198 -------------MSVWAVAILP-NSD-IVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDD 262 (557)
Q Consensus 198 -------------~~v~~v~~~p-~g~-l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~D 262 (557)
..+.+++++| +++ ++++ ++.|++||+.+.+...... ....+..+.+.+.... +++++.+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~---~~~~~~~~~~s~dg~~-l~~~~~~ 315 (349)
T 1jmx_B 242 TGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAAN---LDHTYYCVAFDKKGDK-LYLGGTF 315 (349)
T ss_dssp TCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEE---CSSCCCEEEECSSSSC-EEEESBS
T ss_pred CCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEc---CCCCccceEECCCCCE-EEEecCC
Confidence 1345677789 888 4445 8899999998776543221 1223455666666554 4457888
Q ss_pred CcEEEEecCCC
Q psy7057 263 GIVRVFSANPD 273 (557)
Q Consensus 263 G~IrvW~~~~~ 273 (557)
+.|++|+..+.
T Consensus 316 ~~v~v~d~~~~ 326 (349)
T 1jmx_B 316 NDLAVFNPDTL 326 (349)
T ss_dssp SEEEEEETTTT
T ss_pred CeEEEEecccc
Confidence 99999998754
No 166
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.57 E-value=1.8e-12 Score=131.14 Aligned_cols=216 Identities=13% Similarity=0.118 Sum_probs=162.4
Q ss_pred cccEEEEEEcCCCcEE-EEECC------------------------CcEEEEcCCC-----------------CCCCCCC
Q psy7057 12 SMDVRSLSVTPDGCIL-SASRD------------------------KSAKLWKPND-----------------LSPGAKV 49 (557)
Q Consensus 12 ~~~V~~l~~spdg~l~-sgs~D------------------------g~V~iWd~~~-----------------~~~~~~~ 49 (557)
-+.|.+|+++|+|+++ +.+.+ ++|.+||..+ +++++++
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g 102 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDG 102 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTS
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCC
Confidence 3679999999999955 44445 3799999864 5667788
Q ss_pred CEEEEEECCCeEEEEECCCCe-EEEEE---------cccCCcEEEEEEcC-CC-EEEEEE-CCCeEEEEeCCCcEEEEEe
Q psy7057 50 NTLLSASWDMTAKLWCLESQQ-CKLTI---------RQHEMAVWGVIQLA-NG-IIVTGC-ADKTIKLHSEEGEFLKTLT 116 (557)
Q Consensus 50 ~~l~sgs~Dg~i~iwd~~~~~-~~~~l---------~~h~~~V~~l~~~~-~~-~l~sgs-~dg~I~vwd~~~~~~~~l~ 116 (557)
+++++.+.++.|++|+..... .+..+ ..+-..+..++++| ++ ++++.+ .++.|++|+.++..+..+.
T Consensus 103 ~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~g~~~~~~~ 182 (329)
T 3fvz_A 103 NYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSPSGKFVTQWG 182 (329)
T ss_dssp CEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECTTSCEEEEEC
T ss_pred CEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcCCCCEEEEec
Confidence 988888889999999976542 45555 34555789999999 67 666665 5899999998888887774
Q ss_pred CCC----------CCEEEEEEeCC-CeE-EEEECCCeEEEEECCCCeEEEEEe--CCCCcEEEEEEcCCEEEEE------
Q psy7057 117 GHT----------DCVRGLAVLND-TDF-VSCSNDASIRVWDSTTGKCVHTMY--GHPNFIYSVAAHGDLITSG------ 176 (557)
Q Consensus 117 ~h~----------~~V~~l~~~~~-~~l-vs~s~Dg~I~vwd~~~~~~~~~~~--~h~~~V~~l~~~~~~l~s~------ 176 (557)
... .....|+++|+ +.+ ++...++.|++||..+++.+.++. .+...++++++.+..++..
T Consensus 183 ~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~~v 262 (329)
T 3fvz_A 183 EESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFAVNGKPYF 262 (329)
T ss_dssp EECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEETTEEEEEECCCCT
T ss_pred cCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecCCEEEEeCCCEEe
Confidence 322 34899999998 774 466788999999998899988884 3556778887754433332
Q ss_pred --eCCCeEEEEECCCCceEe------eCCccEEEEEEcCCCc-EEEEEcCCcEEEEecCC
Q psy7057 177 --GEDQCVCVYQNKAQNSFM------IPAMSVWAVAILPNSD-IVTGSSDGIVRVFSANP 227 (557)
Q Consensus 177 --s~Dg~I~iwd~~~~~~~~------~~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~ 227 (557)
+.+..|++|+..+...+. .+...+..++++|+|. +++...+++|++|++..
T Consensus 263 ~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 263 GDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp TCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEE
T ss_pred ccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCCc
Confidence 234589999976663322 3445689999999998 66777899999999864
No 167
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.56 E-value=1.6e-14 Score=161.82 Aligned_cols=267 Identities=9% Similarity=0.042 Sum_probs=172.8
Q ss_pred EEeccCcc---cEEEEEEcCCCc-EEEEEC---------CCcEEEEcCCC---------------CCCCCCCCEEEEEEC
Q psy7057 6 TALYGHSM---DVRSLSVTPDGC-ILSASR---------DKSAKLWKPND---------------LSPGAKVNTLLSASW 57 (557)
Q Consensus 6 ~~l~gH~~---~V~~l~~spdg~-l~sgs~---------Dg~V~iWd~~~---------------~~~~~~~~~l~sgs~ 57 (557)
..+.+|.. .|.+++|||||+ |++++. +++|++||+.+ ++++|+++.|+.++
T Consensus 50 ~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l~~~~~~~~~SPDG~~la~~~- 128 (719)
T 1z68_A 50 TILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNELPRPIQYLCWSPVGSKLAYVY- 128 (719)
T ss_dssp EEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCCSSBCCEEECSSTTCEEEEE-
T ss_pred EEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceecCcccccceECCCCCEEEEEE-
Confidence 34444443 389999999998 777765 78999999754 46788999999886
Q ss_pred CCeEEEEECCCCeEEEEE-cccCCcE-----------------EEEEEcCCC-EEEEEECCC------------------
Q psy7057 58 DMTAKLWCLESQQCKLTI-RQHEMAV-----------------WGVIQLANG-IIVTGCADK------------------ 100 (557)
Q Consensus 58 Dg~i~iwd~~~~~~~~~l-~~h~~~V-----------------~~l~~~~~~-~l~sgs~dg------------------ 100 (557)
+++|++|++.+++..... .++...| .+++|+|+| .|++++.|.
T Consensus 129 ~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~ 208 (719)
T 1z68_A 129 QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPR 208 (719)
T ss_dssp TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCE
T ss_pred CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCcc
Confidence 789999999888765432 3333333 489999999 788877552
Q ss_pred ----------------eEEEEeCCCcEE----E-----EEeCCCCCEEEEEEeCCCeEE-EEECC----CeEEEEE----
Q psy7057 101 ----------------TIKLHSEEGEFL----K-----TLTGHTDCVRGLAVLNDTDFV-SCSND----ASIRVWD---- 146 (557)
Q Consensus 101 ----------------~I~vwd~~~~~~----~-----~l~~h~~~V~~l~~~~~~~lv-s~s~D----g~I~vwd---- 146 (557)
.|++||..+... . .+.+|...+.+++|+|+++++ +.... ..|.+||
T Consensus 209 ~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~ 288 (719)
T 1z68_A 209 TINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFRED 288 (719)
T ss_dssp EEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSS
T ss_pred ceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCC
Confidence 788999655432 1 133688889999999998865 33222 2488899
Q ss_pred CCCCeEEEEE----eCCCCcEE-----EEEE--cCCEEE--EEeCCC--eEEEEECCCC--ceEeeCCccEEEEEEcCCC
Q psy7057 147 STTGKCVHTM----YGHPNFIY-----SVAA--HGDLIT--SGGEDQ--CVCVYQNKAQ--NSFMIPAMSVWAVAILPNS 209 (557)
Q Consensus 147 ~~~~~~~~~~----~~h~~~V~-----~l~~--~~~~l~--s~s~Dg--~I~iwd~~~~--~~~~~~~~~v~~v~~~p~g 209 (557)
+.++++...+ .+|...+. .+.| +|+.|+ ++..++ .|.+|++... ..+..+...+..+.++ ++
T Consensus 289 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~~~~lt~~~~~v~~~~~~-d~ 367 (719)
T 1z68_A 289 WQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVENAIQITSGKWEAINIFRV-TQ 367 (719)
T ss_dssp SSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTTCEECSCSSSCEEEEEEE-CS
T ss_pred CCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCceEecccCceEEEEEEEE-eC
Confidence 8777765444 46666665 6677 676443 444555 4666675544 4444445567777777 66
Q ss_pred c-EEEEEcC-----CcEEEEecCC--CC--cchhH-HHhcccceeEEEeccCCCceeEEEEeCC--CcEEEEecCCCh
Q psy7057 210 D-IVTGSSD-----GIVRVFSANP--DR--QAEDA-VQAQYAEEVKKLKSANEQEIGGVKVSDD--GIVRVFSANPDR 274 (557)
Q Consensus 210 ~-l~sg~~D-----g~I~iwd~~~--~~--~~~~~-~~~~~~~~v~~l~~~~~~~~~~vs~s~D--G~IrvW~~~~~~ 274 (557)
+ ++..+.+ +.+++|.+.. +. ..... ....+...+..+.+.++.....++++.+ ..+.+|++..++
T Consensus 368 ~~i~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~s~dg~~l~~~~s~~~~p~~~l~d~~~g~ 445 (719)
T 1z68_A 368 DSLFYSSNEFEEYPGRRNIYRISIGSYPPSKKCVTCHLRKERCQYYTASFSDYAKYYALVCYGPGIPISTLHDGRTDQ 445 (719)
T ss_dssp SEEEEEESCGGGCTTCBEEEEEECSSSSCCEEESSTTTTTTTBCBEEEEECGGGSSEEEEECCBSSCEEEEECSSSCC
T ss_pred CEEEEEEecCCCCCceEEEEEEeCCCCCCCceeccCccCCCCCceEEEEECCCCCEEEEEcCCCCCCeEEEEECCCCC
Confidence 6 6555544 8899998764 21 11110 0111223344555555555545555554 468888876554
No 168
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.56 E-value=1.1e-13 Score=142.31 Aligned_cols=265 Identities=9% Similarity=-0.033 Sum_probs=174.4
Q ss_pred EEEeccCcccEEE-----EEEcCCCc-EEEEEC-CCc--EEEEcCCC----------------CCCCCCCCEEEEEECCC
Q psy7057 5 STALYGHSMDVRS-----LSVTPDGC-ILSASR-DKS--AKLWKPND----------------LSPGAKVNTLLSASWDM 59 (557)
Q Consensus 5 ~~~l~gH~~~V~~-----l~~spdg~-l~sgs~-Dg~--V~iWd~~~----------------~~~~~~~~~l~sgs~Dg 59 (557)
...|..|...+.. .+|+|||+ |+.++. ++. |.+||+.+ ..++|+++.|+.++.++
T Consensus 23 ~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~ 102 (388)
T 3pe7_A 23 VTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDGR 102 (388)
T ss_dssp EEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETTT
T ss_pred eEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCCC
Confidence 4567778777766 88999998 777776 674 77788765 36788999999999999
Q ss_pred eEEEEECCCCeEEEEEcccCCcEEEEE--EcCCC-EEEEE----------------------ECCCeEEEEeCCCcEEEE
Q psy7057 60 TAKLWCLESQQCKLTIRQHEMAVWGVI--QLANG-IIVTG----------------------CADKTIKLHSEEGEFLKT 114 (557)
Q Consensus 60 ~i~iwd~~~~~~~~~l~~h~~~V~~l~--~~~~~-~l~sg----------------------s~dg~I~vwd~~~~~~~~ 114 (557)
.|++||+.+++....+..+...+.... +++++ .++.. ..+..|.+||........
T Consensus 103 ~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~ 182 (388)
T 3pe7_A 103 NLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTV 182 (388)
T ss_dssp EEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEE
T ss_pred eEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEE
Confidence 999999999987777766666554443 47888 44422 244679999965555566
Q ss_pred EeCCCCCEEEEEEeC-CCe-EEEEECC------CeEEEEECCCCeEEEEEeCCC--CcEEEEEE--cCCEEEEEe-CCC-
Q psy7057 115 LTGHTDCVRGLAVLN-DTD-FVSCSND------ASIRVWDSTTGKCVHTMYGHP--NFIYSVAA--HGDLITSGG-EDQ- 180 (557)
Q Consensus 115 l~~h~~~V~~l~~~~-~~~-lvs~s~D------g~I~vwd~~~~~~~~~~~~h~--~~V~~l~~--~~~~l~s~s-~Dg- 180 (557)
+..+...+..+.|+| ++. ++.++.+ ..|.++|+..++. ..+..+. ..+..+.| +|+.|+..+ .++
T Consensus 183 l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~ 261 (388)
T 3pe7_A 183 ILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNM-RKVKTHAEGESCTHEFWVPDGSALVYVSYLKGS 261 (388)
T ss_dssp EEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCC-EESCCCCTTEEEEEEEECTTSSCEEEEEEETTC
T ss_pred eecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCce-EEeeeCCCCcccccceECCCCCEEEEEecCCCC
Confidence 666777899999999 877 5555543 3788888765543 3444444 35777778 677564433 222
Q ss_pred ---eEEEEECCCCc--eEeeCCcc------EEEEEEcCCCc-EEEE---------EcCCcEEEEecCCCCcchhHHHhcc
Q psy7057 181 ---CVCVYQNKAQN--SFMIPAMS------VWAVAILPNSD-IVTG---------SSDGIVRVFSANPDRQAEDAVQAQY 239 (557)
Q Consensus 181 ---~I~iwd~~~~~--~~~~~~~~------v~~v~~~p~g~-l~sg---------~~Dg~I~iwd~~~~~~~~~~~~~~~ 239 (557)
.|++||+.+.. .+...... ...++|+|+|+ ++.. ..+..|++|++.+++..... .+
T Consensus 262 ~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~---~~ 338 (388)
T 3pe7_A 262 PDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQHRVA---RH 338 (388)
T ss_dssp CCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTTTEEEEEE---EC
T ss_pred CcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCceEEec---cc
Confidence 39999987652 33221110 11236899998 4432 45678999999876543221 11
Q ss_pred cc-----------eeEEEeccCCCceeEEEEeCCCcEEEEecCCC
Q psy7057 240 AE-----------EVKKLKSANEQEIGGVKVSDDGIVRVFSANPD 273 (557)
Q Consensus 240 ~~-----------~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~~ 273 (557)
.. .+..+.+.++....+++...+|...||.++-.
T Consensus 339 ~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~~l~ 383 (388)
T 3pe7_A 339 DTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLATLP 383 (388)
T ss_dssp CCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEECC
T ss_pred cCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEEEECC
Confidence 11 23445566666655566667888888876543
No 169
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.55 E-value=1.3e-12 Score=134.02 Aligned_cols=217 Identities=11% Similarity=0.167 Sum_probs=151.7
Q ss_pred CcccEEEEEEcCCCc-EEEEECCCcEEEEcCC-C-----------------CCCCCCCCE--EEEEE-------------
Q psy7057 11 HSMDVRSLSVTPDGC-ILSASRDKSAKLWKPN-D-----------------LSPGAKVNT--LLSAS------------- 56 (557)
Q Consensus 11 H~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~-~-----------------~~~~~~~~~--l~sgs------------- 56 (557)
+...+..++|+|+|+ |++++.+ .|.+|++. + +.+++++++ +++++
T Consensus 38 ~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~ 116 (365)
T 1jof_A 38 QDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYK 116 (365)
T ss_dssp TTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESS
T ss_pred CCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceeec
Confidence 344678899999998 7788877 99999975 3 456777884 44553
Q ss_pred CCCeEEEEECC-CCeEEEEEc----ccCCcEEEEEEcCCC-EEEEEE-CCCeEEEEeC--CCcEE--EEEe--CCCCCEE
Q psy7057 57 WDMTAKLWCLE-SQQCKLTIR----QHEMAVWGVIQLANG-IIVTGC-ADKTIKLHSE--EGEFL--KTLT--GHTDCVR 123 (557)
Q Consensus 57 ~Dg~i~iwd~~-~~~~~~~l~----~h~~~V~~l~~~~~~-~l~sgs-~dg~I~vwd~--~~~~~--~~l~--~h~~~V~ 123 (557)
.++++.+|++. +++....+. .+...+.+++|+|+| .++++. .++.|++|+. +++.. ..+. .|...++
T Consensus 117 ~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~ 196 (365)
T 1jof_A 117 FAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPR 196 (365)
T ss_dssp SCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEE
T ss_pred CCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCC
Confidence 68999999997 465544443 256789999999999 666655 4689999995 45542 2333 2467799
Q ss_pred EEEEeCCCe-EEEEE-CCCeEEEEECC--CCeEE---EEEeC-------CCC------cEEEEE-E--cCCEEEEEeCC-
Q psy7057 124 GLAVLNDTD-FVSCS-NDASIRVWDST--TGKCV---HTMYG-------HPN------FIYSVA-A--HGDLITSGGED- 179 (557)
Q Consensus 124 ~l~~~~~~~-lvs~s-~Dg~I~vwd~~--~~~~~---~~~~~-------h~~------~V~~l~-~--~~~~l~s~s~D- 179 (557)
.++|+|+++ +++++ .+++|.+|++. +++.. ..+.. |.. .+..++ + ++++|++++.+
T Consensus 197 ~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~ 276 (365)
T 1jof_A 197 WVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRAN 276 (365)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEES
T ss_pred EeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCC
Confidence 999999986 44555 47899999764 56543 22321 222 578888 7 77777766543
Q ss_pred C-----eEEEEECC-CC--ce----EeeCCccEEEEEEcC---CCc-EEEEEc-CCcEEEEecCCC
Q psy7057 180 Q-----CVCVYQNK-AQ--NS----FMIPAMSVWAVAILP---NSD-IVTGSS-DGIVRVFSANPD 228 (557)
Q Consensus 180 g-----~I~iwd~~-~~--~~----~~~~~~~v~~v~~~p---~g~-l~sg~~-Dg~I~iwd~~~~ 228 (557)
. +|.+|++. .. .. +..+...+..++|+| +|+ +++++. ++.|++|+++..
T Consensus 277 ~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 277 KFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp STTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred CCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence 2 89999974 33 21 222444567889999 788 667765 489999998764
No 170
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.53 E-value=2.1e-12 Score=131.73 Aligned_cols=228 Identities=10% Similarity=0.085 Sum_probs=147.8
Q ss_pred CCCCCCCCEEEEEECC----CeEEEEECCC--Ce--EEEEEcccCCcEEEEEEcCCCEEEEEE-CCCeEEEEeCC--CcE
Q psy7057 43 LSPGAKVNTLLSASWD----MTAKLWCLES--QQ--CKLTIRQHEMAVWGVIQLANGIIVTGC-ADKTIKLHSEE--GEF 111 (557)
Q Consensus 43 ~~~~~~~~~l~sgs~D----g~i~iwd~~~--~~--~~~~l~~h~~~V~~l~~~~~~~l~sgs-~dg~I~vwd~~--~~~ 111 (557)
+++++++++|++++.+ +.|.+|++.. ++ .+.....+...+..+++ ....+++++ .++.|.+|+.. +..
T Consensus 55 l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~-dg~~l~~~~~~~~~v~~~~~~~~g~~ 133 (361)
T 3scy_A 55 LIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT-NGKNIVTANYSGGSITVFPIGQDGAL 133 (361)
T ss_dssp EEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE-CSSEEEEEETTTTEEEEEEBCTTSCB
T ss_pred EEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE-CCCEEEEEECCCCEEEEEEeCCCCcC
Confidence 5778889999999986 7999998765 43 33444445667788888 333555555 68899999943 211
Q ss_pred ---EEE--EeC--------CCCCEEEEEEeCCCe-EE-EEECCCeEEEEECCCCe-------E------EEEEeCCCCcE
Q psy7057 112 ---LKT--LTG--------HTDCVRGLAVLNDTD-FV-SCSNDASIRVWDSTTGK-------C------VHTMYGHPNFI 163 (557)
Q Consensus 112 ---~~~--l~~--------h~~~V~~l~~~~~~~-lv-s~s~Dg~I~vwd~~~~~-------~------~~~~~~h~~~V 163 (557)
... ..+ +...+.+++|+|+++ ++ ++..++.|++|++.... . ......+...+
T Consensus 134 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 213 (361)
T 3scy_A 134 LPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGP 213 (361)
T ss_dssp CSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCE
T ss_pred cccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCC
Confidence 111 111 123468899999987 44 44458899999876432 1 11222345667
Q ss_pred EEEEE--cCCEEEEEe-CCCeEEEEECCCC--c---eEee---CCccEEEEEEcCCCc-EEEEEc--CCcEEEEecCC--
Q psy7057 164 YSVAA--HGDLITSGG-EDQCVCVYQNKAQ--N---SFMI---PAMSVWAVAILPNSD-IVTGSS--DGIVRVFSANP-- 227 (557)
Q Consensus 164 ~~l~~--~~~~l~s~s-~Dg~I~iwd~~~~--~---~~~~---~~~~v~~v~~~p~g~-l~sg~~--Dg~I~iwd~~~-- 227 (557)
..++| +++++++++ .++.|.+|++... . .+.. +......++|+|+|+ ++++.. ++.|++|+++.
T Consensus 214 ~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~ 293 (361)
T 3scy_A 214 RHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETN 293 (361)
T ss_dssp EEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTT
T ss_pred eEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCC
Confidence 88888 677777666 6899999997643 1 1211 223468999999999 555554 48999999962
Q ss_pred CCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecCC
Q psy7057 228 DRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANP 272 (557)
Q Consensus 228 ~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~ 272 (557)
+.......... ...+..+.+.++.....++...++.|++|.++.
T Consensus 294 g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~ 337 (361)
T 3scy_A 294 GTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQ 337 (361)
T ss_dssp CCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEECT
T ss_pred CcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEEEC
Confidence 33211111111 234556777777665555556889999987764
No 171
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.49 E-value=1.1e-11 Score=122.12 Aligned_cols=226 Identities=14% Similarity=0.191 Sum_probs=156.6
Q ss_pred CCCCCCCCEEEEEECCCeEEEEECCCCeEEEEEcc------cCCcEEEEEE-cCCCEEEEEEC--CCeEEEEeCCCcEEE
Q psy7057 43 LSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQ------HEMAVWGVIQ-LANGIIVTGCA--DKTIKLHSEEGEFLK 113 (557)
Q Consensus 43 ~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~------h~~~V~~l~~-~~~~~l~sgs~--dg~I~vwd~~~~~~~ 113 (557)
+.+++++.++++.+.++.|.+|+.. ++.+..+.. |...+.++++ .+++.++.+.. ++.|++|+.+++.+.
T Consensus 35 v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d~~g~~~~ 113 (286)
T 1q7f_A 35 VAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQYGQFVR 113 (286)
T ss_dssp EEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEECTTSCEEE
T ss_pred EEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEECCCCcEEE
Confidence 4455678888888889999999987 566666642 4467899999 46775555553 899999998888877
Q ss_pred EEe-CCCCCEEEEEEeCCCeEE-EEECCCeEEEEECCCCeEEEEEe--CCCCcEEEEEE--cCCEEEEEeCCCeEEEEEC
Q psy7057 114 TLT-GHTDCVRGLAVLNDTDFV-SCSNDASIRVWDSTTGKCVHTMY--GHPNFIYSVAA--HGDLITSGGEDQCVCVYQN 187 (557)
Q Consensus 114 ~l~-~h~~~V~~l~~~~~~~lv-s~s~Dg~I~vwd~~~~~~~~~~~--~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~ 187 (557)
.+. .+...+.++++++++.++ +.+.++.|.+||. .++.+..+. .+...+.++++ +++++++.+.++.|++|+.
T Consensus 114 ~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~ 192 (286)
T 1q7f_A 114 KFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQ-NGNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNY 192 (286)
T ss_dssp EECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECT-TSCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEET
T ss_pred EecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcC-CCCEEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcC
Confidence 764 344678999999998855 5556789999995 566666664 34567889999 4566677777899999997
Q ss_pred CCC--ceEeeC--CccEEEEEEcCCCcEE-EEEcCC-cEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeC
Q psy7057 188 KAQ--NSFMIP--AMSVWAVAILPNSDIV-TGSSDG-IVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSD 261 (557)
Q Consensus 188 ~~~--~~~~~~--~~~v~~v~~~p~g~l~-sg~~Dg-~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~ 261 (557)
... ..+... ...+..++++++|.++ +...++ .|++|+..... ...............+.+.+... .+++ +.
T Consensus 193 ~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g~~-~~~~~~~~~~~~~~~i~~~~~g~-l~vs-~~ 269 (286)
T 1q7f_A 193 EGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQDGQL-ISALESKVKHAQCFDVALMDDGS-VVLA-SK 269 (286)
T ss_dssp TCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTTSCE-EEEEEESSCCSCEEEEEEETTTE-EEEE-ET
T ss_pred CCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCCCCE-EEEEcccCCCCcceeEEECCCCc-EEEE-CC
Confidence 543 233222 2468999999999944 554565 99999965432 21111111112244566655543 4455 67
Q ss_pred CCcEEEEecCCC
Q psy7057 262 DGIVRVFSANPD 273 (557)
Q Consensus 262 DG~IrvW~~~~~ 273 (557)
|+.|++|++...
T Consensus 270 ~~~v~v~~~~~~ 281 (286)
T 1q7f_A 270 DYRLYIYRYVQL 281 (286)
T ss_dssp TTEEEEEECSCC
T ss_pred CCeEEEEEcccc
Confidence 999999997653
No 172
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.49 E-value=1.8e-12 Score=133.02 Aligned_cols=230 Identities=9% Similarity=0.047 Sum_probs=147.7
Q ss_pred CCCCCCCCEEEEEECCCeEEEEECC-CCeEEEEEccc-CCcEEEEEEcCCCE--E-EEEE-------------CCCeEEE
Q psy7057 43 LSPGAKVNTLLSASWDMTAKLWCLE-SQQCKLTIRQH-EMAVWGVIQLANGI--I-VTGC-------------ADKTIKL 104 (557)
Q Consensus 43 ~~~~~~~~~l~sgs~Dg~i~iwd~~-~~~~~~~l~~h-~~~V~~l~~~~~~~--l-~sgs-------------~dg~I~v 104 (557)
+++++++++|++++.+ .|.+|++. +++........ ...+.+++++|++. + ++++ .++++.+
T Consensus 45 ~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v 123 (365)
T 1jof_A 45 MTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNV 123 (365)
T ss_dssp EEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEE
T ss_pred EEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEE
Confidence 5677889999999988 99999997 77765433211 12355688999984 3 3442 6899999
Q ss_pred EeC--CCcEEEEEe----CCCCCEEEEEEeCCCe-EEEEE-CCCeEEEEECC-CCeEE--EEEe--CCCCcEEEEEE--c
Q psy7057 105 HSE--EGEFLKTLT----GHTDCVRGLAVLNDTD-FVSCS-NDASIRVWDST-TGKCV--HTMY--GHPNFIYSVAA--H 169 (557)
Q Consensus 105 wd~--~~~~~~~l~----~h~~~V~~l~~~~~~~-lvs~s-~Dg~I~vwd~~-~~~~~--~~~~--~h~~~V~~l~~--~ 169 (557)
|+. +++....+. .+...+.+++|+|+++ ++++. .++.|++|++. +++.. ..+. .|...++.++| +
T Consensus 124 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spd 203 (365)
T 1jof_A 124 FSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPT 203 (365)
T ss_dssp EEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTT
T ss_pred EccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCC
Confidence 994 455544443 2566799999999987 44544 46899999998 67653 3343 24567889998 6
Q ss_pred CCEEEEEeC-CCeEEEEECC--CCc------eEeeC-------Cc------cEEEEE-EcCCCc-EEEEEc-CC-----c
Q psy7057 170 GDLITSGGE-DQCVCVYQNK--AQN------SFMIP-------AM------SVWAVA-ILPNSD-IVTGSS-DG-----I 219 (557)
Q Consensus 170 ~~~l~s~s~-Dg~I~iwd~~--~~~------~~~~~-------~~------~v~~v~-~~p~g~-l~sg~~-Dg-----~ 219 (557)
++++++++. ++.|.+|+.. +.. .+... .. .+..++ |+|+|+ ++++.. ++ +
T Consensus 204 g~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~ 283 (365)
T 1jof_A 204 GNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGY 283 (365)
T ss_dssp SSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCE
T ss_pred CCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCe
Confidence 778877764 7899999743 221 12211 11 488999 999998 555543 23 8
Q ss_pred EEEEecC-CCCcchhHH-HhcccceeEEEeccCC--CceeEEEEe-CCCcEEEEecCCC
Q psy7057 220 VRVFSAN-PDRQAEDAV-QAQYAEEVKKLKSANE--QEIGGVKVS-DDGIVRVFSANPD 273 (557)
Q Consensus 220 I~iwd~~-~~~~~~~~~-~~~~~~~v~~l~~~~~--~~~~~vs~s-~DG~IrvW~~~~~ 273 (557)
|++|+++ +++...... ..........+.+.+. +...+++++ .++.|+||+++.+
T Consensus 284 i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 284 IAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp EEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred EEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence 9999986 333221100 1111112233444442 233455555 4599999998753
No 173
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.47 E-value=8.5e-13 Score=146.17 Aligned_cols=260 Identities=12% Similarity=0.047 Sum_probs=172.7
Q ss_pred eccCcccEEEEEEcCCCc-EEEE--ECCCcEEEEcCCC--------------C---------CC----CCCCCE-EEEEE
Q psy7057 8 LYGHSMDVRSLSVTPDGC-ILSA--SRDKSAKLWKPND--------------L---------SP----GAKVNT-LLSAS 56 (557)
Q Consensus 8 l~gH~~~V~~l~~spdg~-l~sg--s~Dg~V~iWd~~~--------------~---------~~----~~~~~~-l~sgs 56 (557)
+.+|...|..++|++++. +++. +.++...||.... . .+ +|+++. |+.++
T Consensus 19 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~ 98 (662)
T 3azo_A 19 VASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTH 98 (662)
T ss_dssp HHHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEB
T ss_pred HhhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeecCCCeEEEEEE
Confidence 567999999999998866 4455 4578899997422 1 22 377887 66554
Q ss_pred C-CCeEEEEECC--CCeEEEEEcc-----cCCcEEEEEEcCCC-EEEEEECC----------CeEEEEeCCC------cE
Q psy7057 57 W-DMTAKLWCLE--SQQCKLTIRQ-----HEMAVWGVIQLANG-IIVTGCAD----------KTIKLHSEEG------EF 111 (557)
Q Consensus 57 ~-Dg~i~iwd~~--~~~~~~~l~~-----h~~~V~~l~~~~~~-~l~sgs~d----------g~I~vwd~~~------~~ 111 (557)
. +..|.++++. .......+.. |...+.+++|+|+| .|++++.+ ..|++||..+ ..
T Consensus 99 ~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 178 (662)
T 3azo_A 99 FGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSA 178 (662)
T ss_dssp TTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGG
T ss_pred CCCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCc
Confidence 3 5566677765 2033445555 67788999999999 78887776 5899999766 55
Q ss_pred EEEEe-CCCCCEEEEEEeCCCe-EEEEECC--------CeEEEEECC-CC---eEEEEEeCCCCcEEEEEE--cCCEEEE
Q psy7057 112 LKTLT-GHTDCVRGLAVLNDTD-FVSCSND--------ASIRVWDST-TG---KCVHTMYGHPNFIYSVAA--HGDLITS 175 (557)
Q Consensus 112 ~~~l~-~h~~~V~~l~~~~~~~-lvs~s~D--------g~I~vwd~~-~~---~~~~~~~~h~~~V~~l~~--~~~~l~s 175 (557)
...+. .+...+..++|+|+|+ |+.++.+ ..|++||+. ++ +......+|...+..+.| +|+++++
T Consensus 179 ~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~ 258 (662)
T 3azo_A 179 VRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVA 258 (662)
T ss_dssp SEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEE
T ss_pred eeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEE
Confidence 56666 6777888999999987 5556644 379999998 57 444444556788999999 6777788
Q ss_pred EeCCC--eEEEEECCCC--ceEeeC-Ccc--------EEEEEEcCCCc-EEEEEcCCcEEEEec--CCCCcchhHHHhcc
Q psy7057 176 GGEDQ--CVCVYQNKAQ--NSFMIP-AMS--------VWAVAILPNSD-IVTGSSDGIVRVFSA--NPDRQAEDAVQAQY 239 (557)
Q Consensus 176 ~s~Dg--~I~iwd~~~~--~~~~~~-~~~--------v~~v~~~p~g~-l~sg~~Dg~I~iwd~--~~~~~~~~~~~~~~ 239 (557)
++.++ .|.+|+.... ..+..+ ... +.+++++|+++ +++++. +.++||.+ .++.... +..+
T Consensus 259 ~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~~~~---l~~~ 334 (662)
T 3azo_A 259 TDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESGELVD---AAGP 334 (662)
T ss_dssp ECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTTEEEE---CCSS
T ss_pred ECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEECCCCcEEE---ecCC
Confidence 88888 5666665333 222222 111 56789999998 667777 99999944 4443221 1223
Q ss_pred cceeEEEeccCCCceeEEEEeCCCcEEEEecC
Q psy7057 240 AEEVKKLKSANEQEIGGVKVSDDGIVRVFSAN 271 (557)
Q Consensus 240 ~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~ 271 (557)
...+..+.........+++.+.+....||.++
T Consensus 335 ~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d 366 (662)
T 3azo_A 335 WTEWAATLTVSGTRAVGVAASPRTAYEVVELD 366 (662)
T ss_dssp CCEEEEEEEEETTEEEEEEEETTEEEEEEEEE
T ss_pred CCeEEEEEecCCCEEEEEEcCCCCCCEEEEEE
Confidence 33444442223344455666777766666544
No 174
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.47 E-value=6.8e-13 Score=136.41 Aligned_cols=261 Identities=10% Similarity=-0.009 Sum_probs=163.2
Q ss_pred EEEeccCccc-----EEEEEEcCCCc-EEEEEC-C--CcEEEEcCCC----------------CCCCCCCCEEEEEECCC
Q psy7057 5 STALYGHSMD-----VRSLSVTPDGC-ILSASR-D--KSAKLWKPND----------------LSPGAKVNTLLSASWDM 59 (557)
Q Consensus 5 ~~~l~gH~~~-----V~~l~~spdg~-l~sgs~-D--g~V~iWd~~~----------------~~~~~~~~~l~sgs~Dg 59 (557)
.+.|..+... +.+++|+|||+ |+.++. + ..|.+|++.+ ..++|+++.|+.++.++
T Consensus 23 ~~~l~~~~~~~~~~~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~ 102 (396)
T 3c5m_A 23 VTRLTPTDIICHRNYFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNEL 102 (396)
T ss_dssp EEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETTT
T ss_pred eEEEecCCCCccceeeecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcCC
Confidence 3455555433 77889999998 665543 3 3688888765 33688999999999999
Q ss_pred eEEEEECCCCeEEEEEcccCCcEEE-------------------EEEcCCC-EEEEE-----ECCCeEEEEeCCCcEEEE
Q psy7057 60 TAKLWCLESQQCKLTIRQHEMAVWG-------------------VIQLANG-IIVTG-----CADKTIKLHSEEGEFLKT 114 (557)
Q Consensus 60 ~i~iwd~~~~~~~~~l~~h~~~V~~-------------------l~~~~~~-~l~sg-----s~dg~I~vwd~~~~~~~~ 114 (557)
.|.+|++.+++.......+...... +.++|++ .++.. ..+..|.+||..+.....
T Consensus 103 ~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~ 182 (396)
T 3c5m_A 103 NLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEV 182 (396)
T ss_dssp EEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEE
T ss_pred cEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEe
Confidence 9999999988766655544442222 2345555 22222 456689999965444444
Q ss_pred EeCCCCCEEEEEEeC-CCe-EEEEECC------CeEEEEECCCCeEEEEEeCC--CCcEEEEEE--cCCEEEEEeCC---
Q psy7057 115 LTGHTDCVRGLAVLN-DTD-FVSCSND------ASIRVWDSTTGKCVHTMYGH--PNFIYSVAA--HGDLITSGGED--- 179 (557)
Q Consensus 115 l~~h~~~V~~l~~~~-~~~-lvs~s~D------g~I~vwd~~~~~~~~~~~~h--~~~V~~l~~--~~~~l~s~s~D--- 179 (557)
+..+...+..+.|+| ++. |+.++.+ ..|.+||+..++.. .+..+ ...+..++| +++.|+.++.+
T Consensus 183 ~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~ 261 (396)
T 3c5m_A 183 IHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVR-KIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQ 261 (396)
T ss_dssp EEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCE-ESSCCCTTEEEEEEEECTTSSCEEEEEEETTT
T ss_pred eccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCcee-EeeccCCCccccceEECCCCCEEEEEecCCCC
Confidence 445777899999999 665 6655543 46888998665433 33333 235777788 67766666543
Q ss_pred --CeEEEEECCCC--ceEeeCCccEEEEEEcC-CCc-EEEEE----------------cCCcEEEEecCCCCcchhHHHh
Q psy7057 180 --QCVCVYQNKAQ--NSFMIPAMSVWAVAILP-NSD-IVTGS----------------SDGIVRVFSANPDRQAEDAVQA 237 (557)
Q Consensus 180 --g~I~iwd~~~~--~~~~~~~~~v~~v~~~p-~g~-l~sg~----------------~Dg~I~iwd~~~~~~~~~~~~~ 237 (557)
+.|++||+.+. ..+.... ... +.|+| +|+ +++++ .+..|++|++.++......
T Consensus 262 ~~~~l~~~d~~~g~~~~l~~~~-~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~--- 336 (396)
T 3c5m_A 262 TDRVIYKANPETLENEEVMVMP-PCS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQKLC--- 336 (396)
T ss_dssp CCEEEEEECTTTCCEEEEEECC-SEE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCCEEE---
T ss_pred ccceEEEEECCCCCeEEeeeCC-CCC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceEEcc---
Confidence 45999997665 3333222 233 88999 998 55443 3478999998876543211
Q ss_pred cccc-----------eeEEEeccCCCceeEEEEeCCCcEEEEecC
Q psy7057 238 QYAE-----------EVKKLKSANEQEIGGVKVSDDGIVRVFSAN 271 (557)
Q Consensus 238 ~~~~-----------~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~ 271 (557)
.+.. ......+.++....+++...++...||.++
T Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~ 381 (396)
T 3c5m_A 337 KHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIAD 381 (396)
T ss_dssp ECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred CCCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEEEE
Confidence 1111 122334455554444455567777777654
No 175
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.47 E-value=2.3e-12 Score=145.11 Aligned_cols=217 Identities=11% Similarity=0.016 Sum_probs=148.9
Q ss_pred cccEEEEEEcCCCcEEEEECCCcEEEEcCCC----------------C-----CCCCCCCEEEEEECC---------CeE
Q psy7057 12 SMDVRSLSVTPDGCILSASRDKSAKLWKPND----------------L-----SPGAKVNTLLSASWD---------MTA 61 (557)
Q Consensus 12 ~~~V~~l~~spdg~l~sgs~Dg~V~iWd~~~----------------~-----~~~~~~~~l~sgs~D---------g~i 61 (557)
.....+++|+|||+++..+ |++|++||+.+ . .++|++++|+.++.+ +.+
T Consensus 16 ~~~~~~~~w~~dg~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~ 94 (740)
T 4a5s_A 16 RLKLYSLRWISDHEYLYKQ-ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASY 94 (740)
T ss_dssp CCCCCCEEECSSSEEEEEE-TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEE
T ss_pred cccccccEECCCCcEEEEc-CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEE
Confidence 3446689999999944444 99999999875 1 238999999999886 556
Q ss_pred EEEECCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeCCCcEEEEEe--CCCCCE----------------
Q psy7057 62 KLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSEEGEFLKTLT--GHTDCV---------------- 122 (557)
Q Consensus 62 ~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~~~~~~~l~--~h~~~V---------------- 122 (557)
.+||+.+++.. .+..|...+...+|+|+| .|+.+ .++.|++|+..+.....+. ++...+
T Consensus 95 ~~~d~~~~~~~-~l~~~~~~~~~~~~SPdG~~la~~-~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~ 172 (740)
T 4a5s_A 95 DIYDLNKRQLI-TEERIPNNTQWVTWSPVGHKLAYV-WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSA 172 (740)
T ss_dssp EEEETTTTEEC-CSSCCCTTEEEEEECSSTTCEEEE-ETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSS
T ss_pred EEEECCCCcEE-EcccCCCcceeeEECCCCCEEEEE-ECCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCC
Confidence 79999998754 466778889999999999 66666 5789999995443333332 333223
Q ss_pred -EEEEEeCCCe-EEEEECCC------------------------------------eEEEEECCC---Ce--EEEEEe--
Q psy7057 123 -RGLAVLNDTD-FVSCSNDA------------------------------------SIRVWDSTT---GK--CVHTMY-- 157 (557)
Q Consensus 123 -~~l~~~~~~~-lvs~s~Dg------------------------------------~I~vwd~~~---~~--~~~~~~-- 157 (557)
.++.|+|+|+ |+.++.|. +|++||+.+ ++ ....+.
T Consensus 173 ~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~ 252 (740)
T 4a5s_A 173 YSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAP 252 (740)
T ss_dssp SBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCC
T ss_pred CcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCC
Confidence 3589999987 65554221 588899988 73 233343
Q ss_pred ----CCCCcEEEEEE--cCCEEEEEeC----CCeEEEEECCCCc---------eE--eeCCccEE-----EEEEcCCCc-
Q psy7057 158 ----GHPNFIYSVAA--HGDLITSGGE----DQCVCVYQNKAQN---------SF--MIPAMSVW-----AVAILPNSD- 210 (557)
Q Consensus 158 ----~h~~~V~~l~~--~~~~l~s~s~----Dg~I~iwd~~~~~---------~~--~~~~~~v~-----~v~~~p~g~- 210 (557)
+|...+..++| +++.++.... +..|++||..+.. .+ ..+...+. .++|+|||+
T Consensus 253 ~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~ 332 (740)
T 4a5s_A 253 ASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNS 332 (740)
T ss_dssp HHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSE
T ss_pred ccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCE
Confidence 37788999999 6775554432 3479999954432 22 23444433 788999998
Q ss_pred EE-EEEc-CC--cEEEEecCCCCcc
Q psy7057 211 IV-TGSS-DG--IVRVFSANPDRQA 231 (557)
Q Consensus 211 l~-sg~~-Dg--~I~iwd~~~~~~~ 231 (557)
|+ ..+. +| .|++|+..++...
T Consensus 333 l~~~~s~~~G~~~l~~~~~~~~~~~ 357 (740)
T 4a5s_A 333 FYKIISNEEGYRHICYFQIDKKDCT 357 (740)
T ss_dssp EEEEEECTTSCEEEEEEETTCSSCE
T ss_pred EEEEEEcCCCceEEEEEECCCCceE
Confidence 55 5553 44 5788888765543
No 176
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.45 E-value=1.2e-11 Score=125.07 Aligned_cols=211 Identities=13% Similarity=0.052 Sum_probs=151.6
Q ss_pred CeEEEEECCCCeEEEEEc-ccCCcEEEEEEcCCC-EEEEEECCCeEEEEeCCCc--EEEEE---------eCCCCCEEEE
Q psy7057 59 MTAKLWCLESQQCKLTIR-QHEMAVWGVIQLANG-IIVTGCADKTIKLHSEEGE--FLKTL---------TGHTDCVRGL 125 (557)
Q Consensus 59 g~i~iwd~~~~~~~~~l~-~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~~~--~~~~l---------~~h~~~V~~l 125 (557)
++|.+||..+++.+..+. ++-..+..+++.+++ ++++.+.++.|++|+.++. .+..+ .++-...+.|
T Consensus 69 ~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~i 148 (329)
T 3fvz_A 69 DTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDV 148 (329)
T ss_dssp CCEEEECTTTCCEEEEECTTTCSSEEEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEE
T ss_pred CcEEEEECCCCeEEeccCCCccCCceEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEE
Confidence 579999999888877664 445688999999988 7777778899999998776 56665 3455579999
Q ss_pred EEeC-CCeEE-EEE-CCCeEEEEECCCCeEEEEEeCCC----------CcEEEEEE--c-CCEEEEEeCCCeEEEEECCC
Q psy7057 126 AVLN-DTDFV-SCS-NDASIRVWDSTTGKCVHTMYGHP----------NFIYSVAA--H-GDLITSGGEDQCVCVYQNKA 189 (557)
Q Consensus 126 ~~~~-~~~lv-s~s-~Dg~I~vwd~~~~~~~~~~~~h~----------~~V~~l~~--~-~~~l~s~s~Dg~I~iwd~~~ 189 (557)
+++| ++.++ +.+ .++.|++|+ .+++.+..+.... .....|++ + +.++++...+++|++|+..+
T Consensus 149 a~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~ 227 (329)
T 3fvz_A 149 AVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDT 227 (329)
T ss_dssp EECTTTCCEEEEECSSCCEEEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTT
T ss_pred EEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCC
Confidence 9999 67755 554 589999999 6788777774322 34788888 4 45677777889999999764
Q ss_pred C---ceEe--eCCccEEEEEEcCCCc-EEEE-------EcCCcEEEEecCCCCcchhHH-HhcccceeEEEeccCCCcee
Q psy7057 190 Q---NSFM--IPAMSVWAVAILPNSD-IVTG-------SSDGIVRVFSANPDRQAEDAV-QAQYAEEVKKLKSANEQEIG 255 (557)
Q Consensus 190 ~---~~~~--~~~~~v~~v~~~p~g~-l~sg-------~~Dg~I~iwd~~~~~~~~~~~-~~~~~~~v~~l~~~~~~~~~ 255 (557)
. ..+. .+...+++++++| +. +++. ..+..|++|+..+++...... ..........+...+.. ..
T Consensus 228 G~~~~~~~~~~~~~~~~~~~~~p-g~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG-~l 305 (329)
T 3fvz_A 228 KEFVREIKHASFGRNVFAISYIP-GFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDG-TV 305 (329)
T ss_dssp CCEEEEECCTTTTTCEEEEEEET-TEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTS-EE
T ss_pred CcEEEEEeccccCCCcceeeecC-CEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCC-CE
Confidence 4 2232 2345788999999 43 2222 234589999988776543321 11233446677776655 66
Q ss_pred EEEEeCCCcEEEEecCC
Q psy7057 256 GVKVSDDGIVRVFSANP 272 (557)
Q Consensus 256 ~vs~s~DG~IrvW~~~~ 272 (557)
+++.+.++.|++|+++.
T Consensus 306 yvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 306 YIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp EEEESSSCCEEEEEEEE
T ss_pred EEEECCCCEEEEEeCCc
Confidence 78888999999999764
No 177
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.42 E-value=6.1e-12 Score=129.23 Aligned_cols=222 Identities=12% Similarity=0.075 Sum_probs=150.0
Q ss_pred EEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC------------------CCCCCCCCEEEEE----------
Q psy7057 5 STALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND------------------LSPGAKVNTLLSA---------- 55 (557)
Q Consensus 5 ~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~------------------~~~~~~~~~l~sg---------- 55 (557)
.+...+|...+.+++|+|||+ |+.++.++.|++||+.+ +..++++..++..
T Consensus 73 ~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~ 152 (388)
T 3pe7_A 73 TQLTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPL 152 (388)
T ss_dssp EECCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCC
T ss_pred EEeeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccc
Confidence 344456666666788999998 88999999999999876 1124566666532
Q ss_pred ------------ECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcC-CC-EEEEEECC------CeEEEEeCCCcEEEEE
Q psy7057 56 ------------SWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLA-NG-IIVTGCAD------KTIKLHSEEGEFLKTL 115 (557)
Q Consensus 56 ------------s~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~-~~-~l~sgs~d------g~I~vwd~~~~~~~~l 115 (557)
..+..|.+||+.+++.. .+..+...+..+.|+| ++ .|+..+.+ ..|.++|..+.....+
T Consensus 153 ~~~~~~~~~~~~~~~~~l~~~d~~~g~~~-~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l 231 (388)
T 3pe7_A 153 TDWKKFHEFYFTKPCCRLMRVDLKTGEST-VILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKV 231 (388)
T ss_dssp CSHHHHHHHGGGCCCEEEEEEETTTCCEE-EEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEES
T ss_pred cccchhhhhhccCCcceEEEEECCCCceE-EeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEe
Confidence 24467999999988654 4445677899999999 88 66666653 3688888777666666
Q ss_pred eCCC--CCEEEEEEeCCCe-EEEEEC--CC---eEEEEECCCCeEE--EEEeCCCCcE-----EEEEEcCCEEEEE----
Q psy7057 116 TGHT--DCVRGLAVLNDTD-FVSCSN--DA---SIRVWDSTTGKCV--HTMYGHPNFI-----YSVAAHGDLITSG---- 176 (557)
Q Consensus 116 ~~h~--~~V~~l~~~~~~~-lvs~s~--Dg---~I~vwd~~~~~~~--~~~~~h~~~V-----~~l~~~~~~l~s~---- 176 (557)
..+. ..+..+.|+|+++ |+..+. +. .|.+||+.+++.. ..+.++.... ..++.+|+.|+..
T Consensus 232 ~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 311 (388)
T 3pe7_A 232 KTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDD 311 (388)
T ss_dssp CCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC-------
T ss_pred eeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeec
Confidence 6555 3588899999987 543332 22 3999999988743 3333311000 1344477765543
Q ss_pred -----eCCCeEEEEECCCC--ceEeeCCc-----------cEEEEEEcCCCc-EEE-EEcCCcEEEEecCC
Q psy7057 177 -----GEDQCVCVYQNKAQ--NSFMIPAM-----------SVWAVAILPNSD-IVT-GSSDGIVRVFSANP 227 (557)
Q Consensus 177 -----s~Dg~I~iwd~~~~--~~~~~~~~-----------~v~~v~~~p~g~-l~s-g~~Dg~I~iwd~~~ 227 (557)
..+..|++||+... ..+..+.. .+.+++|+|+|+ |+. +..++...||.++-
T Consensus 312 ~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~~l 382 (388)
T 3pe7_A 312 SGYKIENDPFLYVFNMKNGTQHRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLATL 382 (388)
T ss_dssp -----CCCCEEEEEETTTTEEEEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEEC
T ss_pred cccccCCCCEEEEEeccCCceEEeccccCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEEEEC
Confidence 45678999998765 45555554 578899999998 554 44578888886653
No 178
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.38 E-value=1.8e-09 Score=106.00 Aligned_cols=259 Identities=9% Similarity=0.040 Sum_probs=169.4
Q ss_pred EeccCcccEEEEEEcCCCcEEEEEC-CCcEEEEcCCC----------------CCCCCCCCEEEEEECCCeEEEEECCCC
Q psy7057 7 ALYGHSMDVRSLSVTPDGCILSASR-DKSAKLWKPND----------------LSPGAKVNTLLSASWDMTAKLWCLESQ 69 (557)
Q Consensus 7 ~l~gH~~~V~~l~~spdg~l~sgs~-Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~ 69 (557)
.+..+...+.++++.++|.++.+.. ++.|.+||... +..++++..+++...++.|..|+.. +
T Consensus 9 ~~~~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g 87 (299)
T 2z2n_A 9 NLTNQDTGPYGITVSDKGKVWITQHKANMISCINLDGKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK-G 87 (299)
T ss_dssp ECCSSSCCEEEEEECTTSCEEEEETTTTEEEEECTTCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-S
T ss_pred cCCCcCCCccceEECCCCCEEEEecCCCcEEEEcCCCCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC-C
Confidence 3455677899999999999666655 78899998654 3445667777776668889999976 3
Q ss_pred eE-EEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeCCCcEEEEE-eCCCCCEEEEEEeCCCeEEE-EECCCeEEEE
Q psy7057 70 QC-KLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSEEGEFLKTL-TGHTDCVRGLAVLNDTDFVS-CSNDASIRVW 145 (557)
Q Consensus 70 ~~-~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~~~~~~~l-~~h~~~V~~l~~~~~~~lvs-~s~Dg~I~vw 145 (557)
+. ...+......+.++++.+++ ++++...++.|.+||.++...... ..+...+.++++.+++.+.. ...++.|..|
T Consensus 88 ~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~ 167 (299)
T 2z2n_A 88 IIKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITDDGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRI 167 (299)
T ss_dssp CEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTTCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEE
T ss_pred cEEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECCCCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEE
Confidence 32 22222345678999999988 555555678999999866554332 23456789999999988664 4456899999
Q ss_pred ECCCCeEEEE-EeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC-ceEee--CCccEEEEEEcCCCcEEEEE-cCC
Q psy7057 146 DSTTGKCVHT-MYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ-NSFMI--PAMSVWAVAILPNSDIVTGS-SDG 218 (557)
Q Consensus 146 d~~~~~~~~~-~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~-~~~~~--~~~~v~~v~~~p~g~l~sg~-~Dg 218 (557)
|. +++.... +..+...+.++++ ++.++++...++.|.+|+.... ..+.. ....+.++++.++|.+..+. .++
T Consensus 168 ~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~ 246 (299)
T 2z2n_A 168 TE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITTSGEITEFKIPTPNARPHAITAGAGIDLWFTEWGAN 246 (299)
T ss_dssp CT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECTTCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTT
T ss_pred cC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECCCCcEEEEECCCCCCCceeEEECCCCCEEEeccCCc
Confidence 98 6665443 2334556788888 4566666666889999998222 22222 33578999999999966555 678
Q ss_pred cEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecCC
Q psy7057 219 IVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANP 272 (557)
Q Consensus 219 ~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~ 272 (557)
.|.+|+.. +... ..........+..+.. +... ..++.+ .+.|..++...
T Consensus 247 ~i~~~d~~-g~~~-~~~~~~~~~~~~~i~~-~~g~-l~v~~~-~~~l~~~~~~~ 295 (299)
T 2z2n_A 247 KIGRLTSN-NIIE-EYPIQIKSAEPHGICF-DGET-IWFAME-CDKIGKLTLIK 295 (299)
T ss_dssp EEEEEETT-TEEE-EEECSSSSCCEEEEEE-CSSC-EEEEET-TTEEEEEEEC-
T ss_pred eEEEECCC-CceE-EEeCCCCCCccceEEe-cCCC-EEEEec-CCcEEEEEcCc
Confidence 99999984 3221 1111122234555555 3333 334434 45555555543
No 179
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.38 E-value=2.8e-10 Score=114.40 Aligned_cols=212 Identities=10% Similarity=0.083 Sum_probs=145.9
Q ss_pred EEEeccCcccEEEEEEcCCCcEE-EEECCCcEEEEcCCC----------------CCCCCCCCEEEEEECC----CeEEE
Q psy7057 5 STALYGHSMDVRSLSVTPDGCIL-SASRDKSAKLWKPND----------------LSPGAKVNTLLSASWD----MTAKL 63 (557)
Q Consensus 5 ~~~l~gH~~~V~~l~~spdg~l~-sgs~Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~D----g~i~i 63 (557)
...+.+|...+.+++|+|+|+|+ ++..++.|.+||..+ +.+++++.++++...+ +.|.+
T Consensus 37 ~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~ 116 (333)
T 2dg1_A 37 WLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFA 116 (333)
T ss_dssp EEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEE
T ss_pred eEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEE
Confidence 45567777888999999999955 677889999999865 4456677777777666 68999
Q ss_pred EECCCCeEEEEEc--ccCCcEEEEEEcCCCEEEEEEC-------CCeEEEEeCCCcEEEEEeCCCCCEEEEEEeCCCe-E
Q psy7057 64 WCLESQQCKLTIR--QHEMAVWGVIQLANGIIVTGCA-------DKTIKLHSEEGEFLKTLTGHTDCVRGLAVLNDTD-F 133 (557)
Q Consensus 64 wd~~~~~~~~~l~--~h~~~V~~l~~~~~~~l~sgs~-------dg~I~vwd~~~~~~~~l~~h~~~V~~l~~~~~~~-l 133 (557)
||..++.....+. .+...+.++++.|++.++.++. .+.|..++..+..+..+..+...+.+++++|++. +
T Consensus 117 ~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~dg~~l 196 (333)
T 2dg1_A 117 ATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVL 196 (333)
T ss_dssp ECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEESSEEEEEECTTSSEE
T ss_pred EeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecCCCcccceEECCCCCEE
Confidence 9998876543443 2456799999999994444444 2556667655433333433445688999999975 4
Q ss_pred E-EEECCCeEEEEECCC-CeEEEE--------EeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC--ceEeeCCc-
Q psy7057 134 V-SCSNDASIRVWDSTT-GKCVHT--------MYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ--NSFMIPAM- 198 (557)
Q Consensus 134 v-s~s~Dg~I~vwd~~~-~~~~~~--------~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~--~~~~~~~~- 198 (557)
+ +.+.++.|.+||+.+ +..+.. +.++ ..+..+++ +++++++...++.|.+|+.... ..+..+..
T Consensus 197 ~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~~d~~G~l~v~~~~~~~v~~~d~~g~~~~~~~~~~~~ 275 (333)
T 2dg1_A 197 WVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGH-EGPDSCCIDSDDNLYVAMYGQGRVLVFNKRGYPIGQILIPGRD 275 (333)
T ss_dssp EEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSS-SEEEEEEEBTTCCEEEEEETTTEEEEECTTSCEEEEEECTTGG
T ss_pred EEEeCCCCeEEEEEecCCCcCcccccceEEEecCCC-CCCCceEECCCCCEEEEEcCCCEEEEECCCCCEEEEEEcCCCc
Confidence 4 555678999999863 332211 1122 46777888 5677777778899999997433 34444433
Q ss_pred -----cEEEEEEcCCCc-EEEEEcC
Q psy7057 199 -----SVWAVAILPNSD-IVTGSSD 217 (557)
Q Consensus 199 -----~v~~v~~~p~g~-l~sg~~D 217 (557)
.+.+++|+|++. |+.++.+
T Consensus 276 ~g~~~~~~~~~~~~dg~~L~v~~~~ 300 (333)
T 2dg1_A 276 EGHMLRSTHPQFIPGTNQLIICSND 300 (333)
T ss_dssp GTCSCBCCEEEECTTSCEEEEEEEC
T ss_pred cccccCcceEEECCCCCEEEEEeCc
Confidence 588999999975 6555554
No 180
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.38 E-value=5.1e-12 Score=142.22 Aligned_cols=185 Identities=8% Similarity=-0.016 Sum_probs=133.8
Q ss_pred CCCCCCCCEEEEEECCCeEEEEECCCCeEEEEEcccCCc-----EEEEEEcCCC-EEEEEECC---------CeEEEEeC
Q psy7057 43 LSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMA-----VWGVIQLANG-IIVTGCAD---------KTIKLHSE 107 (557)
Q Consensus 43 ~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~-----V~~l~~~~~~-~l~sgs~d---------g~I~vwd~ 107 (557)
+.+.+++.+++++ |++|++||+.++++...+.+|... ...+.|+|+| .|+.++.+ +.+.+||.
T Consensus 22 ~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~ 99 (740)
T 4a5s_A 22 LRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDL 99 (740)
T ss_dssp EEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEET
T ss_pred cEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEEC
Confidence 4567788888886 999999999999988888877543 2347889999 77877776 55679997
Q ss_pred CCcEEEEEeCCCCCEEEEEEeCCCeEEEEECCCeEEEEECCCCeEEEE-EeCCCCcE-----------------EEEEE-
Q psy7057 108 EGEFLKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHT-MYGHPNFI-----------------YSVAA- 168 (557)
Q Consensus 108 ~~~~~~~l~~h~~~V~~l~~~~~~~lvs~s~Dg~I~vwd~~~~~~~~~-~~~h~~~V-----------------~~l~~- 168 (557)
.+.....+..|...+...+|+|+|+.++-..|+.|++|++.+++..+. ..++...+ .++.|
T Consensus 100 ~~~~~~~l~~~~~~~~~~~~SPdG~~la~~~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wS 179 (740)
T 4a5s_A 100 NKRQLITEERIPNNTQWVTWSPVGHKLAYVWNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWS 179 (740)
T ss_dssp TTTEECCSSCCCTTEEEEEECSSTTCEEEEETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEEC
T ss_pred CCCcEEEcccCCCcceeeEECCCCCEEEEEECCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEEC
Confidence 766666778888899999999998844333578999999988775432 22333323 23666
Q ss_pred -cCCEEEEEeCCC------------------------------------eEEEEECCC---C-----ceEee------CC
Q psy7057 169 -HGDLITSGGEDQ------------------------------------CVCVYQNKA---Q-----NSFMI------PA 197 (557)
Q Consensus 169 -~~~~l~s~s~Dg------------------------------------~I~iwd~~~---~-----~~~~~------~~ 197 (557)
+|+.|+.++.|. +|++||+.+ . ..+.. +.
T Consensus 180 pDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~ 259 (740)
T 4a5s_A 180 PNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGD 259 (740)
T ss_dssp TTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSC
T ss_pred CCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCC
Confidence 788888765321 578899766 3 23332 56
Q ss_pred ccEEEEEEcCCCc-EEEEEc----CCcEEEEecCCCC
Q psy7057 198 MSVWAVAILPNSD-IVTGSS----DGIVRVFSANPDR 229 (557)
Q Consensus 198 ~~v~~v~~~p~g~-l~sg~~----Dg~I~iwd~~~~~ 229 (557)
..+..++|+|+|+ ++.... +..|++||+.++.
T Consensus 260 ~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~ 296 (740)
T 4a5s_A 260 HYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESS 296 (740)
T ss_dssp EEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTT
T ss_pred eEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCc
Confidence 6799999999999 444332 3479999998775
No 181
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.37 E-value=8.8e-12 Score=139.25 Aligned_cols=219 Identities=9% Similarity=0.025 Sum_probs=151.4
Q ss_pred cCcccEEEEEEcCCCc-EE-E----EECCCcEEEEcCCC----------------CCCCCCCCEEEEEECCCe-------
Q psy7057 10 GHSMDVRSLSVTPDGC-IL-S----ASRDKSAKLWKPND----------------LSPGAKVNTLLSASWDMT------- 60 (557)
Q Consensus 10 gH~~~V~~l~~spdg~-l~-s----gs~Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~Dg~------- 60 (557)
+|...+.+++|||||+ |+ + |+.+.+|++||+.+ +++++++..|+.++.|..
T Consensus 118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~ 197 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDE 197 (695)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGG
T ss_pred CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcccCcccccceEEecCCCEEEEEEecCCCCCcccc
Confidence 4666799999999998 55 2 33346899999865 456788999999999876
Q ss_pred ------EEEEECCCCe----EEEEEcccCCcEEEEEEcCCC-EEEEEECCC----eEEEEeCCCcEEEEEeCCCCCEEEE
Q psy7057 61 ------AKLWCLESQQ----CKLTIRQHEMAVWGVIQLANG-IIVTGCADK----TIKLHSEEGEFLKTLTGHTDCVRGL 125 (557)
Q Consensus 61 ------i~iwd~~~~~----~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg----~I~vwd~~~~~~~~l~~h~~~V~~l 125 (557)
|++|++.++. ++.....|...+.++.|+|+| .|+.++.++ .|.+|+..+.....+..+...+...
T Consensus 198 ~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~ 277 (695)
T 2bkl_A 198 RPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVGAKYEV 277 (695)
T ss_dssp GGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSSCCEEE
T ss_pred CCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCCceEEE
Confidence 9999998875 333344466788999999999 666666555 6777775444455566666666666
Q ss_pred EEeCCCeEEEEEC----CCeEEEEECCCCeE---EEEEeCC-CCcEEEEEE-cCCEEEEEeCCCeEEEEECC--CC--ce
Q psy7057 126 AVLNDTDFVSCSN----DASIRVWDSTTGKC---VHTMYGH-PNFIYSVAA-HGDLITSGGEDQCVCVYQNK--AQ--NS 192 (557)
Q Consensus 126 ~~~~~~~lvs~s~----Dg~I~vwd~~~~~~---~~~~~~h-~~~V~~l~~-~~~~l~s~s~Dg~I~iwd~~--~~--~~ 192 (557)
.+++++ ++..+. ++.|.+||+.+++. ...+..+ ...+..+++ ++.++++...|+..++|... .. ..
T Consensus 278 ~~~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~lv~~~~~dg~~~l~~~~~~g~~~~~ 356 (695)
T 2bkl_A 278 HAWKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIVGGHLSLEYLKDATSEVRVATLKGKPVRT 356 (695)
T ss_dssp EEETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEETTEEEEEEEETTEEEEEEEETTCCEEEE
T ss_pred EecCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEECCEEEEEEEECCEEEEEEEeCCCCeeEE
Confidence 664444 554443 58899999987652 3333333 456777888 55577888899988887532 22 33
Q ss_pred EeeC-CccEEEEEEcCCCc-EE-EEE---cCCcEEEEecCCCC
Q psy7057 193 FMIP-AMSVWAVAILPNSD-IV-TGS---SDGIVRVFSANPDR 229 (557)
Q Consensus 193 ~~~~-~~~v~~v~~~p~g~-l~-sg~---~Dg~I~iwd~~~~~ 229 (557)
+..+ ...+..++++|++. ++ +.+ ..++|++||+.+++
T Consensus 357 l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~ 399 (695)
T 2bkl_A 357 VQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGK 399 (695)
T ss_dssp CCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCC
T ss_pred ecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 4444 45677888899886 44 332 25789999998765
No 182
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.36 E-value=8.8e-11 Score=118.66 Aligned_cols=241 Identities=10% Similarity=0.017 Sum_probs=156.8
Q ss_pred ccEEEEEEcCCCc-EEEE---------ECCCcEEEEcCCC-----------CCCCCCCCEEEEEECC---C--eEEEEEC
Q psy7057 13 MDVRSLSVTPDGC-ILSA---------SRDKSAKLWKPND-----------LSPGAKVNTLLSASWD---M--TAKLWCL 66 (557)
Q Consensus 13 ~~V~~l~~spdg~-l~sg---------s~Dg~V~iWd~~~-----------~~~~~~~~~l~sgs~D---g--~i~iwd~ 66 (557)
..+..+++ ||+ ++.. +.++.|.+|++.+ +.++|+++.|+.++.+ + .|.+|++
T Consensus 15 ~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~ 92 (347)
T 2gop_A 15 AYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARRFIENATMPRISPDGKKIAFMRANEEKKVSEIWVADL 92 (347)
T ss_dssp CEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEEEESCEEEEECTTSSEEEEEEEETTTTEEEEEEEET
T ss_pred EEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceEEcccCCCeEECCCCCEEEEEEeccCCCcceEEEEEC
Confidence 46777888 776 5433 1266788898765 5788999999888754 3 4788888
Q ss_pred CCCeEEEEEcccCCcEEEEEEcCCC-EEEEEEC---------------------------CCeEEEEeCCCcEE-EEEeC
Q psy7057 67 ESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCA---------------------------DKTIKLHSEEGEFL-KTLTG 117 (557)
Q Consensus 67 ~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~---------------------------dg~I~vwd~~~~~~-~~l~~ 117 (557)
.+++.......+ . +.+++|+|++ .|+.++. ...|.+||..+... ..+..
T Consensus 93 ~~g~~~~l~~~~-~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~ 170 (347)
T 2gop_A 93 ETLSSKKILEAK-N-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK 170 (347)
T ss_dssp TTTEEEEEEEES-E-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE
T ss_pred CCCceEEEEcCC-C-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC
Confidence 887765544433 3 9999999998 6666653 25688899654443 55554
Q ss_pred CCCCEEEEEEeCCCeEE-EEECCC-------eEEEEECCCCeEEEEEeCCCCcEEEEEEcCCEEEEEeCC--------Ce
Q psy7057 118 HTDCVRGLAVLNDTDFV-SCSNDA-------SIRVWDSTTGKCVHTMYGHPNFIYSVAAHGDLITSGGED--------QC 181 (557)
Q Consensus 118 h~~~V~~l~~~~~~~lv-s~s~Dg-------~I~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~l~s~s~D--------g~ 181 (557)
. .+..++|+|++ ++ +++.+. ...||.+.+++. ..+..+ ..+.+++.+|+.|+.++.+ ..
T Consensus 171 -~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~~-~~l~~~-~~~~~~spdg~~l~~~~~~~~~~~~~~~~ 245 (347)
T 2gop_A 171 -P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGKE-EKMFEK-VSFYAVDSDGERILLYGKPEKKYMSEHNK 245 (347)
T ss_dssp -E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTEE-EEEEEE-ESEEEEEECSSCEEEEECCSSSCCCSSCE
T ss_pred -C-CcccccCCCCe-EEEEEecccccccccccccEEEeCCCce-EEeccC-cceeeECCCCCEEEEEEccccCCccccce
Confidence 3 78899999999 55 554432 334444335554 344444 6666666688887777644 46
Q ss_pred EEEEECCCC-ceE-eeCCccEEE-EEEcCCCcEEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEE
Q psy7057 182 VCVYQNKAQ-NSF-MIPAMSVWA-VAILPNSDIVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVK 258 (557)
Q Consensus 182 I~iwd~~~~-~~~-~~~~~~v~~-v~~~p~g~l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs 258 (557)
|.+|| ... ..+ ..+...+.. +.|+ ++-+++++.++.++|| +..+.... .......+..+.+.+ . .+++
T Consensus 246 l~~~d-~~~~~~l~~~~~~~~~~~~~~s-dg~~~~~~~~~~~~l~-~~~g~~~~---~~~~~~~v~~~~~s~--~-~~~~ 316 (347)
T 2gop_A 246 LYIYD-GKEVMGILDEVDRGVGQAKIKD-GKVYFTLFEEGSVNLY-IWDGEIKP---IAKGRHWIMGFDVDE--I-VVYL 316 (347)
T ss_dssp EEEEC-SSCEEESSTTCCSEEEEEEEET-TEEEEEEEETTEEEEE-EESSSEEE---EECSSSEEEEEEESS--S-EEEE
T ss_pred EEEEC-CCceEeccccCCcccCCccEEc-CcEEEEEecCCcEEEE-EcCCceEE---EecCCCeEEeeeeeC--c-EEEE
Confidence 88888 322 222 233456776 8898 7745678889999999 87433211 112245566666665 3 4566
Q ss_pred EeCCCcE-EEEecC
Q psy7057 259 VSDDGIV-RVFSAN 271 (557)
Q Consensus 259 ~s~DG~I-rvW~~~ 271 (557)
++.++.. +||.++
T Consensus 317 ~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 317 KETATRLRELFTWD 330 (347)
T ss_dssp EECSSSCCEEEEES
T ss_pred EcCCCChHHheEeC
Confidence 6666665 888765
No 183
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.35 E-value=7e-11 Score=114.91 Aligned_cols=214 Identities=9% Similarity=0.054 Sum_probs=148.6
Q ss_pred cEEEEEEcCCCcEEE-E-ECCCcEEEEcCCC----------------CCCCCCCCEEEEEECCCeEEEEECCCCeEEEEE
Q psy7057 14 DVRSLSVTPDGCILS-A-SRDKSAKLWKPND----------------LSPGAKVNTLLSASWDMTAKLWCLESQQCKLTI 75 (557)
Q Consensus 14 ~V~~l~~spdg~l~s-g-s~Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l 75 (557)
...+++++++|+|+. + +.++.|.+|+... +.+++++..+++.. ++.|.+|+..+.... .+
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~-~~ 102 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQT-VL 102 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCE-EC
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEe-ee
Confidence 678999999999555 5 6788999998754 34455677555554 889999998765432 23
Q ss_pred c-ccCCcEEEEEEcCCC-EEEEEECCCeEEEEeCCCcE-EEEEeCCCCCEEEEEEeCCCeEE-EEECCCeEEEEECCCCe
Q psy7057 76 R-QHEMAVWGVIQLANG-IIVTGCADKTIKLHSEEGEF-LKTLTGHTDCVRGLAVLNDTDFV-SCSNDASIRVWDSTTGK 151 (557)
Q Consensus 76 ~-~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~~~~-~~~l~~h~~~V~~l~~~~~~~lv-s~s~Dg~I~vwd~~~~~ 151 (557)
. .....+.++++.+++ ++++...++.|.+|+..... ..........+.++++++++.++ +...++.|.+||.....
T Consensus 103 ~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~ 182 (270)
T 1rwi_B 103 PFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNN 182 (270)
T ss_dssp CCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCC
T ss_pred ecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCc
Confidence 2 233678999999988 55555667899999743222 22222333467889999988755 55567899999987766
Q ss_pred EEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCCc-eEe--eCCccEEEEEEcCCCc-EEEEEcCCcEEEEec
Q psy7057 152 CVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQN-SFM--IPAMSVWAVAILPNSD-IVTGSSDGIVRVFSA 225 (557)
Q Consensus 152 ~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~~-~~~--~~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~ 225 (557)
.......+...+.+|++ ++.++++...++.|.+|+..... ... .....+.++++.++|. +++...++.|++++.
T Consensus 183 ~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~ 262 (270)
T 1rwi_B 183 QVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTS 262 (270)
T ss_dssp EEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEECTTCCEEEEEGGGTEEEEECC
T ss_pred eEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEECCCCCEEEEECCCCEEEEEcC
Confidence 54433334467888998 45566666678899999976542 211 1224689999999999 566677999999998
Q ss_pred CCCC
Q psy7057 226 NPDR 229 (557)
Q Consensus 226 ~~~~ 229 (557)
...+
T Consensus 263 ~~~~ 266 (270)
T 1rwi_B 263 LEHH 266 (270)
T ss_dssp CGGG
T ss_pred CCcc
Confidence 7554
No 184
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.34 E-value=1.9e-10 Score=128.74 Aligned_cols=218 Identities=12% Similarity=0.049 Sum_probs=152.2
Q ss_pred CcccEEEEEEcCCCc-EEEEEC-CC----cEEEEcCCC---------------CCCCCCCCEEEEEECCCe---------
Q psy7057 11 HSMDVRSLSVTPDGC-ILSASR-DK----SAKLWKPND---------------LSPGAKVNTLLSASWDMT--------- 60 (557)
Q Consensus 11 H~~~V~~l~~spdg~-l~sgs~-Dg----~V~iWd~~~---------------~~~~~~~~~l~sgs~Dg~--------- 60 (557)
|...+.+++|||||+ |+.++. .| +|++||+.+ ++++++++.|+.++.++.
T Consensus 123 ~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~ 202 (710)
T 2xdw_A 123 GTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTET 202 (710)
T ss_dssp SCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEECSCCEEECTTSSEEEEEECCCCSSCCSSSCC
T ss_pred CCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccCcccceEEEEeCCCEEEEEEECCcccccccccc
Confidence 445688999999998 665443 33 899999876 568889999999998876
Q ss_pred -------EEEEECCCCe----EEEEEcccCCcEEEEEEcCCC-EEEEEEC-----CCeEEEEeCCC-------c-EEEEE
Q psy7057 61 -------AKLWCLESQQ----CKLTIRQHEMAVWGVIQLANG-IIVTGCA-----DKTIKLHSEEG-------E-FLKTL 115 (557)
Q Consensus 61 -------i~iwd~~~~~----~~~~l~~h~~~V~~l~~~~~~-~l~sgs~-----dg~I~vwd~~~-------~-~~~~l 115 (557)
|++|++.+++ .+.....|...+..+.|+|+| .|+.++. +..|.+||... . ....+
T Consensus 203 ~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l 282 (710)
T 2xdw_A 203 STNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKL 282 (710)
T ss_dssp CCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEE
T ss_pred ccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEe
Confidence 9999998875 222333356668899999999 5655554 56899999543 2 46667
Q ss_pred eCCCCCEEEEEEeCCCe-EEEEECC----CeEEEEECCCCe--EEEEEeCCCC--cEEEEEEc-CC-EEEEEeCCCe--E
Q psy7057 116 TGHTDCVRGLAVLNDTD-FVSCSND----ASIRVWDSTTGK--CVHTMYGHPN--FIYSVAAH-GD-LITSGGEDQC--V 182 (557)
Q Consensus 116 ~~h~~~V~~l~~~~~~~-lvs~s~D----g~I~vwd~~~~~--~~~~~~~h~~--~V~~l~~~-~~-~l~s~s~Dg~--I 182 (557)
..+...+... +++++. |+..+.. ..|.+||+.++. ....+..|.. .+..+++. +. ++++...++. |
T Consensus 283 ~~~~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l 361 (710)
T 2xdw_A 283 IDNFEGEYDY-VTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTL 361 (710)
T ss_dssp ECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEE
T ss_pred eCCCCcEEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEE
Confidence 7777766654 666654 5544443 369999988764 2344555544 67778873 44 6677778875 5
Q ss_pred EEEECCCC---ceEeeCCccEEEEEEcCCCc-EE-EEEc---CCcEEEEecCCCC
Q psy7057 183 CVYQNKAQ---NSFMIPAMSVWAVAILPNSD-IV-TGSS---DGIVRVFSANPDR 229 (557)
Q Consensus 183 ~iwd~~~~---~~~~~~~~~v~~v~~~p~g~-l~-sg~~---Dg~I~iwd~~~~~ 229 (557)
++|++... ..+..+...+..++++|++. ++ +.++ .++|++||+.+++
T Consensus 362 ~~~~~~~g~~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 362 QLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp EEEETTTCCEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred EEEECCCCCEEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 56676333 45666667788999999886 44 3332 5789999997765
No 185
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.33 E-value=2.5e-10 Score=113.00 Aligned_cols=220 Identities=13% Similarity=0.079 Sum_probs=153.3
Q ss_pred EEeccCcccEEEEEEcCCCc--EEEEECCCcEEEEcCCC--------------CCCCCCCCEEEEEECCCeEEEEECCCC
Q psy7057 6 TALYGHSMDVRSLSVTPDGC--ILSASRDKSAKLWKPND--------------LSPGAKVNTLLSASWDMTAKLWCLESQ 69 (557)
Q Consensus 6 ~~l~gH~~~V~~l~~spdg~--l~sgs~Dg~V~iWd~~~--------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~ 69 (557)
..+..+.....+++|+|+|. ++++..++.|..|+..+ +.+++++.++++...++.|.+||..++
T Consensus 21 ~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g 100 (296)
T 3e5z_A 21 RRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQLSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGG 100 (296)
T ss_dssp EEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSCEEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTC
T ss_pred EEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCCeEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCC
Confidence 34556667789999999997 56778899999999764 556778887777777799999999888
Q ss_pred eEEEEEccc----CCcEEEEEEcCCC-EEEE----EE-------------CCCeEEEEeCCCcEEEEEeCCCCCEEEEEE
Q psy7057 70 QCKLTIRQH----EMAVWGVIQLANG-IIVT----GC-------------ADKTIKLHSEEGEFLKTLTGHTDCVRGLAV 127 (557)
Q Consensus 70 ~~~~~l~~h----~~~V~~l~~~~~~-~l~s----gs-------------~dg~I~vwd~~~~~~~~l~~h~~~V~~l~~ 127 (557)
+........ ...+..+++.|+| ++++ |+ ..+.|..++..+. +..+..+......+++
T Consensus 101 ~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~g~-~~~~~~~~~~~~gi~~ 179 (296)
T 3e5z_A 101 EWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPDGT-LSAPIRDRVKPNGLAF 179 (296)
T ss_dssp CEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTTSC-EEEEECCCSSEEEEEE
T ss_pred cEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCCCC-EEEeecCCCCCccEEE
Confidence 755443322 2345679999999 5555 32 1346666765544 4445567777899999
Q ss_pred eCCCe-EEEEECCCeEEEEECC-CCeE---EEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC--ceEeeCCc
Q psy7057 128 LNDTD-FVSCSNDASIRVWDST-TGKC---VHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ--NSFMIPAM 198 (557)
Q Consensus 128 ~~~~~-lvs~s~Dg~I~vwd~~-~~~~---~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~--~~~~~~~~ 198 (557)
+|++. +++.+.++.|.+|++. +++. ...+..+...+.++++ +|+++++. ++.|.+|+.... ..+..+..
T Consensus 180 s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~g~~~~~~~~~~~ 257 (296)
T 3e5z_A 180 LPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA--GDGVHVLTPDGDELGRVLTPQT 257 (296)
T ss_dssp CTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE--TTEEEEECTTSCEEEEEECSSC
T ss_pred CCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc--CCeEEEECCCCCEEEEEECCCC
Confidence 99987 5566677899999986 5554 3344334556677888 56655544 889999997643 45555665
Q ss_pred cEEEEEE-cCCCc-EEEEEcCCcEEEEecCCCCc
Q psy7057 199 SVWAVAI-LPNSD-IVTGSSDGIVRVFSANPDRQ 230 (557)
Q Consensus 199 ~v~~v~~-~p~g~-l~sg~~Dg~I~iwd~~~~~~ 230 (557)
+.+++| .|+++ |++++.++ +.-++..+.+.
T Consensus 258 -~~~~~f~~~d~~~L~v~t~~~-l~~~~~~~~~~ 289 (296)
T 3e5z_A 258 -TSNLCFGGPEGRTLYMTVSTE-FWSIETNVRGL 289 (296)
T ss_dssp -CCEEEEESTTSCEEEEEETTE-EEEEECSCCBC
T ss_pred -ceeEEEECCCCCEEEEEcCCe-EEEEEcccccc
Confidence 889999 57877 77777664 44445555443
No 186
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.32 E-value=3.6e-10 Score=111.42 Aligned_cols=181 Identities=13% Similarity=0.093 Sum_probs=138.0
Q ss_pred CCCEEEEEECCCeEEEEECCCCeEEEEEcccC-CcEEEEEEcCCCEEEEEECCCeEEEEeCCCcEEEEEeCCC-CCEEEE
Q psy7057 48 KVNTLLSASWDMTAKLWCLESQQCKLTIRQHE-MAVWGVIQLANGIIVTGCADKTIKLHSEEGEFLKTLTGHT-DCVRGL 125 (557)
Q Consensus 48 ~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~-~~V~~l~~~~~~~l~sgs~dg~I~vwd~~~~~~~~l~~h~-~~V~~l 125 (557)
.++.|++++.++.|.+||.++++.+.++..+. ..+.++.++|+|.++. +.++.|..||.+++.+..+..+. ..+.++
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv-s~~~~V~~~d~~G~~~W~~~~~~~~~~~~~ 82 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF-SYSKGAKMITRDGRELWNIAAPAGCEMQTA 82 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE-ECBSEEEEECTTSCEEEEEECCTTCEEEEE
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE-eCCCCEEEECCCCCEEEEEcCCCCcccccc
Confidence 36789999999999999999999999998776 4788999999994444 56888999999999999988753 578899
Q ss_pred EEeCCCeEE-EEEC-CCeEEEEECCCCeEEEEEeC------CCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC--ceE
Q psy7057 126 AVLNDTDFV-SCSN-DASIRVWDSTTGKCVHTMYG------HPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ--NSF 193 (557)
Q Consensus 126 ~~~~~~~lv-s~s~-Dg~I~vwd~~~~~~~~~~~~------h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~--~~~ 193 (557)
.+.+++.++ +.+. ++.|..+|. +++.+.++.. +......+++ +++++++.+.++.|..||.... .++
T Consensus 83 ~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~G~~~w~~ 161 (276)
T 3no2_A 83 RILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPNGQLLNSV 161 (276)
T ss_dssp EECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTTSCEEEEE
T ss_pred EECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCCCCEEEEE
Confidence 999998844 5565 678888884 7888777652 1122333444 7889999999999999997622 222
Q ss_pred eeCCccEEEEEEcCCCc-EEEEEcCCcEEEEecCCCCcc
Q psy7057 194 MIPAMSVWAVAILPNSD-IVTGSSDGIVRVFSANPDRQA 231 (557)
Q Consensus 194 ~~~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~~~ 231 (557)
... ..+.++.+.+++. +++++.++.|..+|..+++..
T Consensus 162 ~~~-~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~ 199 (276)
T 3no2_A 162 KLS-GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIV 199 (276)
T ss_dssp ECS-SCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEE
T ss_pred ECC-CCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEE
Confidence 222 3566788899998 556666778999998877654
No 187
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.32 E-value=5.7e-10 Score=112.69 Aligned_cols=217 Identities=11% Similarity=-0.055 Sum_probs=149.3
Q ss_pred CEEEEEECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCCCEEEEEE-CCCeEEEEeC-CCcEEEEEeCCC-----CCE
Q psy7057 50 NTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGC-ADKTIKLHSE-EGEFLKTLTGHT-----DCV 122 (557)
Q Consensus 50 ~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~~l~sgs-~dg~I~vwd~-~~~~~~~l~~h~-----~~V 122 (557)
..+++...+++|.+||..+++.+.++. .......+++++++.+..+. .++.|.+||. +++....+.... ...
T Consensus 55 ~lyv~~~~~~~v~viD~~t~~~~~~i~-~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p 133 (328)
T 3dsm_A 55 IGWIVVNNSHVIFAIDINTFKEVGRIT-GFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGST 133 (328)
T ss_dssp EEEEEEGGGTEEEEEETTTCCEEEEEE-CCSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBC
T ss_pred EEEEEEcCCCEEEEEECcccEEEEEcC-CCCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCc
Confidence 344555557999999999999988885 45678899998888555555 8999999995 455555555322 145
Q ss_pred EEEEEeCCCeEEEEE--CCCeEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCC----------CeEEEEECC
Q psy7057 123 RGLAVLNDTDFVSCS--NDASIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGED----------QCVCVYQNK 188 (557)
Q Consensus 123 ~~l~~~~~~~lvs~s--~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~D----------g~I~iwd~~ 188 (557)
..+++ .++.++.+. .+++|.++|+.+++.+.++... .....+.+ ++++++++..+ +.|.++|..
T Consensus 134 ~~i~~-~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g-~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~ 211 (328)
T 3dsm_A 134 EQMVQ-YGKYVYVNCWSYQNRILKIDTETDKVVDELTIG-IQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAE 211 (328)
T ss_dssp CCEEE-ETTEEEEEECTTCCEEEEEETTTTEEEEEEECS-SCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETT
T ss_pred ceEEE-ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcC-CCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECC
Confidence 66777 456655554 4899999999999988887643 23456666 56666665554 789999987
Q ss_pred CCc---eEeeC-CccEEEEEEcCCCc-EEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEE----
Q psy7057 189 AQN---SFMIP-AMSVWAVAILPNSD-IVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKV---- 259 (557)
Q Consensus 189 ~~~---~~~~~-~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~---- 259 (557)
+.+ .+..+ ......++++|+++ ++++.. .|.+||..+.+................+...+......++.
T Consensus 212 t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y 289 (328)
T 3dsm_A 212 TFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN--DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDY 289 (328)
T ss_dssp TTEEEEEEECCTTCCCEEEEECTTSCEEEEESS--SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTS
T ss_pred CCeEEEEEecCCCCCceeEEEecCCCEEEEEcc--EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEccccc
Confidence 663 33322 23689999999888 555443 89999998766432111111123456677766566666777
Q ss_pred eCCCcEEEEecC
Q psy7057 260 SDDGIVRVFSAN 271 (557)
Q Consensus 260 s~DG~IrvW~~~ 271 (557)
..+|.|.+|+.+
T Consensus 290 ~~~~~V~v~d~~ 301 (328)
T 3dsm_A 290 QQQGIVYRYSPQ 301 (328)
T ss_dssp SSEEEEEEECTT
T ss_pred ccCCEEEEECCC
Confidence 778999999976
No 188
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.32 E-value=1.5e-10 Score=116.41 Aligned_cols=214 Identities=11% Similarity=0.083 Sum_probs=147.2
Q ss_pred ccEEEEEEcCCCc-EEEEECCCcEEEEcCCC-------------CCCCCCCCEEEEEECCCeEEEEECCCCeEEEEEccc
Q psy7057 13 MDVRSLSVTPDGC-ILSASRDKSAKLWKPND-------------LSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQH 78 (557)
Q Consensus 13 ~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~-------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h 78 (557)
..|.+++|++++. ++..+.++.++.|.-.. +.+++++.+++++..++.|.+||..+++.......+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~ 85 (333)
T 2dg1_A 6 QDLPTLFYSGKSNSAVPIISESELQTITAEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSH 85 (333)
T ss_dssp CCCCBCCSCGGGGCSSCCCCGGGSCEEECEEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECS
T ss_pred cccceeeecCCccceeEEeecccCcccccceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCC
Confidence 4577888888876 55667788888883221 456678887788888999999999888766555456
Q ss_pred CCcEEEEEEcCCC-EEEEEECC----CeEEEEeCCCcEEE-EEe--CCCCCEEEEEEeCCCeEEEEEC-------CCeEE
Q psy7057 79 EMAVWGVIQLANG-IIVTGCAD----KTIKLHSEEGEFLK-TLT--GHTDCVRGLAVLNDTDFVSCSN-------DASIR 143 (557)
Q Consensus 79 ~~~V~~l~~~~~~-~l~sgs~d----g~I~vwd~~~~~~~-~l~--~h~~~V~~l~~~~~~~lvs~s~-------Dg~I~ 143 (557)
...+.++++++++ ++++...+ +.|.+||..+.... .+. .+...+.+++++|++.++.++. .+.|.
T Consensus 86 ~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~ 165 (333)
T 2dg1_A 86 KANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVY 165 (333)
T ss_dssp SSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEE
T ss_pred CCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEE
Confidence 7889999999998 45554455 58999996554433 332 2456799999999988665554 25566
Q ss_pred EEECCCCeEEEEEeCCCCcEEEEEE--cCCEE-EEEeCCCeEEEEECCC-C---ceE-----eeCC--ccEEEEEEcCCC
Q psy7057 144 VWDSTTGKCVHTMYGHPNFIYSVAA--HGDLI-TSGGEDQCVCVYQNKA-Q---NSF-----MIPA--MSVWAVAILPNS 209 (557)
Q Consensus 144 vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l-~s~s~Dg~I~iwd~~~-~---~~~-----~~~~--~~v~~v~~~p~g 209 (557)
.+|..+++... +..+...+..+++ +++.| ++.+.++.|.+|+... . ..+ .... ..+..+++.++|
T Consensus 166 ~~~~~~~~~~~-~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G 244 (333)
T 2dg1_A 166 YVSPDFRTVTP-IIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDD 244 (333)
T ss_dssp EECTTSCCEEE-EEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTC
T ss_pred EEeCCCCEEEE-eecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCC
Confidence 77765555433 2223345778888 56655 4555678999999743 1 111 1111 367889999999
Q ss_pred cEE-EEEcCCcEEEEecCC
Q psy7057 210 DIV-TGSSDGIVRVFSANP 227 (557)
Q Consensus 210 ~l~-sg~~Dg~I~iwd~~~ 227 (557)
.+. +...++.|++|+.+.
T Consensus 245 ~l~v~~~~~~~v~~~d~~g 263 (333)
T 2dg1_A 245 NLYVAMYGQGRVLVFNKRG 263 (333)
T ss_dssp CEEEEEETTTEEEEECTTS
T ss_pred CEEEEEcCCCEEEEECCCC
Confidence 954 445678999999853
No 189
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.31 E-value=2.3e-10 Score=117.28 Aligned_cols=218 Identities=12% Similarity=0.090 Sum_probs=146.2
Q ss_pred EEEEEeccCcccEEEEEEcCCCc-EEEEE----------CCCcEEEEcCCC----------------------CCCCCCC
Q psy7057 3 KLSTALYGHSMDVRSLSVTPDGC-ILSAS----------RDKSAKLWKPND----------------------LSPGAKV 49 (557)
Q Consensus 3 kl~~~l~gH~~~V~~l~~spdg~-l~sgs----------~Dg~V~iWd~~~----------------------~~~~~~~ 49 (557)
++..++..+..+ .++|+|||+ |++++ .+++|.+||..+ +.+++++
T Consensus 42 ~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg 119 (361)
T 2oiz_A 42 KFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDG 119 (361)
T ss_dssp CEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTS
T ss_pred eEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCC
Confidence 455667776666 899999998 66654 367899999875 3567789
Q ss_pred CEEEEEEC--CCeEEEEECCCCeEEEE-EcccCCcEEEEEEcCCC--EEEEEECCCeEEEEeC--CCcEEEEE------e
Q psy7057 50 NTLLSASW--DMTAKLWCLESQQCKLT-IRQHEMAVWGVIQLANG--IIVTGCADKTIKLHSE--EGEFLKTL------T 116 (557)
Q Consensus 50 ~~l~sgs~--Dg~i~iwd~~~~~~~~~-l~~h~~~V~~l~~~~~~--~l~sgs~dg~I~vwd~--~~~~~~~l------~ 116 (557)
++|++++. +++|.+||+.+++.+.+ +. +... ..+.+.|++ .+++.+.||.+.+|+. .++..... .
T Consensus 120 ~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~-~~~~-~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~ 197 (361)
T 2oiz_A 120 KFIVLQNASPATSIGIVDVAKGDYVEDVTA-AAGC-WSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFS 197 (361)
T ss_dssp SEEEEEEESSSEEEEEEETTTTEEEEEEGG-GTTE-EEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSC
T ss_pred CEEEEECCCCCCeEEEEECCCCcEEEEEec-CCCc-ceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEc
Confidence 99998874 58999999999988877 44 3322 335667765 7889999999999883 35544221 1
Q ss_pred CCCCCEEEEEEeCCC-eEEEEECCCeEEEEECCCCe--EEEEEeCCC----------C--cEEEEEEcCCEEEEEeC---
Q psy7057 117 GHTDCVRGLAVLNDT-DFVSCSNDASIRVWDSTTGK--CVHTMYGHP----------N--FIYSVAAHGDLITSGGE--- 178 (557)
Q Consensus 117 ~h~~~V~~l~~~~~~-~lvs~s~Dg~I~vwd~~~~~--~~~~~~~h~----------~--~V~~l~~~~~~l~s~s~--- 178 (557)
.+..++ .+.+++++ .++..+.++.|.++|+.... .+..+.-.. . ....+..+++.++++..
T Consensus 198 ~~~~~~-~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~ 276 (361)
T 2oiz_A 198 VKDDPI-FIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDG 276 (361)
T ss_dssp TTTSCB-CSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSC
T ss_pred CCCCce-EEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCC
Confidence 222222 22224444 46666788999999986543 223322111 1 11233336666665432
Q ss_pred --------CCeEEEEECCCC---ceEeeCCccEEEEEEcCCCc-EEEEEcCCcEEEEecCCC
Q psy7057 179 --------DQCVCVYQNKAQ---NSFMIPAMSVWAVAILPNSD-IVTGSSDGIVRVFSANPD 228 (557)
Q Consensus 179 --------Dg~I~iwd~~~~---~~~~~~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~ 228 (557)
...|.+||+.+. ..+..+. +++++|+|+|+ +++++. ++|.+||..+.
T Consensus 277 ~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~-~~v~v~D~~t~ 335 (361)
T 2oiz_A 277 KEGTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDG-GNVNVYDISQP 335 (361)
T ss_dssp CTTCTTCCCSEEEEEETTTTEEEEEEECTT--CCEEEEETTTTEEEEECS-SCEEEEECSSS
T ss_pred CcccccCCCceEEEEECCCCcEEEEEecCC--eeEEEECCCCCEEEEeCC-CeEEEEECCCC
Confidence 358999998777 4445555 99999999999 555555 99999999887
No 190
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.29 E-value=1.5e-10 Score=118.82 Aligned_cols=208 Identities=14% Similarity=0.093 Sum_probs=135.8
Q ss_pred EEEEcCCCc-EEEEECCCcEEEEcCCCC----------CCCCCCCEEEE-------------------------E-----
Q psy7057 17 SLSVTPDGC-ILSASRDKSAKLWKPNDL----------SPGAKVNTLLS-------------------------A----- 55 (557)
Q Consensus 17 ~l~~spdg~-l~sgs~Dg~V~iWd~~~~----------~~~~~~~~l~s-------------------------g----- 55 (557)
.+.|+|||+ |+.++.++.|.+|++.+- .+.+++..|+. +
T Consensus 85 ~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~ 164 (396)
T 3c5m_A 85 GGFISTDERAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHT 164 (396)
T ss_dssp TCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHT
T ss_pred cceECCCCCEEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccC
Confidence 478999998 888999999999998761 11112222221 1
Q ss_pred ECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcC-CC-EEEEEECC------CeEEEEeCCCcEEEEEeCCC--CCEEEE
Q psy7057 56 SWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLA-NG-IIVTGCAD------KTIKLHSEEGEFLKTLTGHT--DCVRGL 125 (557)
Q Consensus 56 s~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~-~~-~l~sgs~d------g~I~vwd~~~~~~~~l~~h~--~~V~~l 125 (557)
..+..|.+||+.+++..... .+...+..+.|+| ++ .|+..+.+ ..|.+|+..+.....+..+. ..+..+
T Consensus 165 ~~~~~l~~~d~~~g~~~~~~-~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~ 243 (396)
T 3c5m_A 165 NPTCRLIKVDIETGELEVIH-QDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHE 243 (396)
T ss_dssp CCCEEEEEEETTTCCEEEEE-EESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEE
T ss_pred CCcceEEEEECCCCcEEeec-cCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCccccce
Confidence 34568999999888765444 5677899999999 66 56665543 35888887665555554442 358889
Q ss_pred EEeCCCe-EEEEECC-----CeEEEEECCCCeEEEEEeCCCCcEEEEEE-cCCEEEEEe----------------CCCeE
Q psy7057 126 AVLNDTD-FVSCSND-----ASIRVWDSTTGKCVHTMYGHPNFIYSVAA-HGDLITSGG----------------EDQCV 182 (557)
Q Consensus 126 ~~~~~~~-lvs~s~D-----g~I~vwd~~~~~~~~~~~~h~~~V~~l~~-~~~~l~s~s----------------~Dg~I 182 (557)
.|+|++. |+.++.+ +.|++||+.+++...... .......... +++++++++ .+..|
T Consensus 244 ~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~-~~~~~~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i 322 (396)
T 3c5m_A 244 FWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMV-MPPCSHLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFL 322 (396)
T ss_dssp EECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEE-CCSEEEEEECSSSSEEEEEECCC----------CCCCCCEE
T ss_pred EECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeee-CCCCCCCccCCCCceEEEecCCcceeeccccccccCCCCcE
Confidence 9999987 6655443 459999998887544332 1221122333 677777654 34789
Q ss_pred EEEECCCC--ceEeeCCc-----------cEEEEEEcCCCc-EEEEE-cCCcEEEEecC
Q psy7057 183 CVYQNKAQ--NSFMIPAM-----------SVWAVAILPNSD-IVTGS-SDGIVRVFSAN 226 (557)
Q Consensus 183 ~iwd~~~~--~~~~~~~~-----------~v~~v~~~p~g~-l~sg~-~Dg~I~iwd~~ 226 (557)
++||+... ..+..+.. .+..++|+|+|+ |+.++ .++...||.++
T Consensus 323 ~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~ 381 (396)
T 3c5m_A 323 YVLNTKAKSAQKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIAD 381 (396)
T ss_dssp EEEETTTTBCCEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred EEEecccCceEEccCCCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEEEE
Confidence 99997654 45555543 256788999998 65554 45665666543
No 191
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.29 E-value=1.8e-10 Score=116.28 Aligned_cols=202 Identities=11% Similarity=0.060 Sum_probs=139.9
Q ss_pred ccEEEEEEcCCCc-EEEEECC---Cc--EEEEcCCC--------------CCCCCCCCEEEEEECC--------------
Q psy7057 13 MDVRSLSVTPDGC-ILSASRD---KS--AKLWKPND--------------LSPGAKVNTLLSASWD-------------- 58 (557)
Q Consensus 13 ~~V~~l~~spdg~-l~sgs~D---g~--V~iWd~~~--------------~~~~~~~~~l~sgs~D-------------- 58 (557)
..+.+++|+|||+ |+.++.+ +. |.+|++.+ +.++|+++.|+.++.+
T Consensus 59 ~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~ 138 (347)
T 2gop_A 59 ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAKNIRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVP 138 (347)
T ss_dssp ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEESEEEEEEECTTSSEEEEEEECCCC---------CC
T ss_pred ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCCCccceeECCCCCEEEEEEccCCCcCCcEEEcccc
Confidence 4577899999998 7766543 33 77777764 5678899988888743
Q ss_pred -------------CeEEEEECCCCeEEEEEcccCCcEEEEEEcCCCEEEEEECCC---------eEEEEeCCCcEEEEEe
Q psy7057 59 -------------MTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADK---------TIKLHSEEGEFLKTLT 116 (557)
Q Consensus 59 -------------g~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~~l~sgs~dg---------~I~vwd~~~~~~~~l~ 116 (557)
..|.+|++.+++.+..+.. . .+..+.|+|++++++++.+. .|.++| .++ ...+.
T Consensus 139 ~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg~~~~~~~~~~~~~~~~~~~l~~~d-~~~-~~~l~ 214 (347)
T 2gop_A 139 AWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDKIVVNVPHREIIPQYFKFWDIYIWE-DGK-EEKMF 214 (347)
T ss_dssp CC---------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTEEEEEEECCCSSCCSSCCEEEEEEE-TTE-EEEEE
T ss_pred eeecCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCCCeEEEEEecccccccccccccEEEeC-CCc-eEEec
Confidence 5789999998887455554 3 77889999999555555442 355556 444 44444
Q ss_pred CCCCCEEEEEEeCCCe-EEEEECC--------CeEEEEECCCCeEEEEEeCCCCcEEE-EEE-cCCEEEEEeCCCeEEEE
Q psy7057 117 GHTDCVRGLAVLNDTD-FVSCSND--------ASIRVWDSTTGKCVHTMYGHPNFIYS-VAA-HGDLITSGGEDQCVCVY 185 (557)
Q Consensus 117 ~h~~~V~~l~~~~~~~-lvs~s~D--------g~I~vwd~~~~~~~~~~~~h~~~V~~-l~~-~~~~l~s~s~Dg~I~iw 185 (557)
.+ ..+.++ +|+|+ ++.++.+ ..|.+|| +++.......|...+.. +.| ++ ++++++.++.+++|
T Consensus 215 ~~-~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~sdg-~~~~~~~~~~~~l~ 288 (347)
T 2gop_A 215 EK-VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKDGK-VYFTLFEEGSVNLY 288 (347)
T ss_dssp EE-ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEETTE-EEEEEEETTEEEEE
T ss_pred cC-cceeeE--CCCCCEEEEEEccccCCccccceEEEEC--CCceEeccccCCcccCCccEEcCc-EEEEEecCCcEEEE
Confidence 44 555554 88876 6665543 4688888 66655444556777876 777 45 78889999999999
Q ss_pred ECCCC--ceEeeCCccEEEEEEcCCCcEEEEEcCCcE-EEEecC
Q psy7057 186 QNKAQ--NSFMIPAMSVWAVAILPNSDIVTGSSDGIV-RVFSAN 226 (557)
Q Consensus 186 d~~~~--~~~~~~~~~v~~v~~~p~g~l~sg~~Dg~I-~iwd~~ 226 (557)
.... ..+..+...|.+++++| .-+++++.++.. +||.++
T Consensus 289 -~~~g~~~~~~~~~~~v~~~~~s~-~~~~~~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 289 -IWDGEIKPIAKGRHWIMGFDVDE-IVVYLKETATRLRELFTWD 330 (347)
T ss_dssp -EESSSEEEEECSSSEEEEEEESS-SEEEEEECSSSCCEEEEES
T ss_pred -EcCCceEEEecCCCeEEeeeeeC-cEEEEEcCCCChHHheEeC
Confidence 7533 34444566799999999 446677777665 788765
No 192
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.28 E-value=6.8e-11 Score=130.85 Aligned_cols=222 Identities=14% Similarity=0.104 Sum_probs=147.5
Q ss_pred EEeccCcccEE---------EEEEc--CCCcE-EEEEC--CCcEEEEcCC----C-------------------CCCCCC
Q psy7057 6 TALYGHSMDVR---------SLSVT--PDGCI-LSASR--DKSAKLWKPN----D-------------------LSPGAK 48 (557)
Q Consensus 6 ~~l~gH~~~V~---------~l~~s--pdg~l-~sgs~--Dg~V~iWd~~----~-------------------~~~~~~ 48 (557)
+.|..|...|. ...|+ |||+. +..+. +..|.+|++. . ++++|+
T Consensus 61 ~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spD 140 (662)
T 3azo_A 61 ESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPE 140 (662)
T ss_dssp EESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETT
T ss_pred ceeCCCCccccccccccCCccceeeeecCCCeEEEEEECCCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCC
Confidence 45666766666 66665 99873 43333 5678888875 3 335688
Q ss_pred CCEEEEEECC----------CeEEEEECCC------CeEEEEEc-ccCCcEEEEEEcCCC-EEEEEECC--------CeE
Q psy7057 49 VNTLLSASWD----------MTAKLWCLES------QQCKLTIR-QHEMAVWGVIQLANG-IIVTGCAD--------KTI 102 (557)
Q Consensus 49 ~~~l~sgs~D----------g~i~iwd~~~------~~~~~~l~-~h~~~V~~l~~~~~~-~l~sgs~d--------g~I 102 (557)
++.|++++.+ .+|++|++.+ ++. ..+. .+...+..++|+|+| .|+.++.+ ..|
T Consensus 141 g~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i 219 (662)
T 3azo_A 141 RGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAV-RELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTEL 219 (662)
T ss_dssp TTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGS-EESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEE
T ss_pred CCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCce-eEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEE
Confidence 9999998877 5899999987 544 3455 566788889999999 77777755 379
Q ss_pred EEEeCC--C---cEEEEEeCCCCCEEEEEEeCCCeEE-EEECCC--eEEEEECCCCeEEEEEeCCCCc--------EEEE
Q psy7057 103 KLHSEE--G---EFLKTLTGHTDCVRGLAVLNDTDFV-SCSNDA--SIRVWDSTTGKCVHTMYGHPNF--------IYSV 166 (557)
Q Consensus 103 ~vwd~~--~---~~~~~l~~h~~~V~~l~~~~~~~lv-s~s~Dg--~I~vwd~~~~~~~~~~~~h~~~--------V~~l 166 (557)
.+||.. + .......+|...+..+.|+|+++++ +++.++ .|.+||+.+++.......+... +.++
T Consensus 220 ~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~ 299 (662)
T 3azo_A 220 KTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWF 299 (662)
T ss_dssp EEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSE
T ss_pred EEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceE
Confidence 999965 4 3344445567889999999998854 666777 6777777677655433333222 4567
Q ss_pred EE--cCCEEEEEeCCCeEEEE--ECCCC--ceEeeCCccEEEE-EEcCCCc-EEEEEcCCcEEE--EecCCCC
Q psy7057 167 AA--HGDLITSGGEDQCVCVY--QNKAQ--NSFMIPAMSVWAV-AILPNSD-IVTGSSDGIVRV--FSANPDR 229 (557)
Q Consensus 167 ~~--~~~~l~s~s~Dg~I~iw--d~~~~--~~~~~~~~~v~~v-~~~p~g~-l~sg~~Dg~I~i--wd~~~~~ 229 (557)
++ ++.++++++. +.+++| |.... +.+..+...+..+ ++.++.. +++++.+....+ +++.+++
T Consensus 300 ~~~~~~~~~~~~~~-~~~~l~~~d~~~~~~~~l~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~ 371 (662)
T 3azo_A 300 APLANGLIAVVHGK-GAAVLGILDPESGELVDAAGPWTEWAATLTVSGTRAVGVAASPRTAYEVVELDTVTGR 371 (662)
T ss_dssp EECTTSCEEEEEBS-SSCEEEEEETTTTEEEECCSSCCEEEEEEEEETTEEEEEEEETTEEEEEEEEETTTCC
T ss_pred eEeCCCEEEEEEEc-CccEEEEEECCCCcEEEecCCCCeEEEEEecCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 77 5678888888 999999 55433 4555566667766 4443333 344555554444 4554544
No 193
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.25 E-value=2.5e-10 Score=110.93 Aligned_cols=230 Identities=10% Similarity=0.019 Sum_probs=150.2
Q ss_pred CCCCCCCCEEE-EEECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCCCEEEEEECCCeEEEEeCCCcEEEEEeC-CCC
Q psy7057 43 LSPGAKVNTLL-SASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHSEEGEFLKTLTG-HTD 120 (557)
Q Consensus 43 ~~~~~~~~~l~-sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~~l~sgs~dg~I~vwd~~~~~~~~l~~-h~~ 120 (557)
+.+++++..++ +.+.++.|.+|+..+.........+...+.++++.+++.++.+..++.|.+||..+.....+.. ...
T Consensus 29 i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~i~~~d~~~~~~~~~~~~~~~ 108 (270)
T 1rwi_B 29 VAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDFNNRVVTLAAGSNNQTVLPFDGLN 108 (270)
T ss_dssp EEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEETTTEEEEECTTCSCCEECCCCSCS
T ss_pred eEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcCCCEEEEEeCCCceEeeeecCCcC
Confidence 34455677666 4467899999997665433222233456788999998855545558899999977765554432 336
Q ss_pred CEEEEEEeCCCeEE-EEECCCeEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCCceEe---
Q psy7057 121 CVRGLAVLNDTDFV-SCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQNSFM--- 194 (557)
Q Consensus 121 ~V~~l~~~~~~~lv-s~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~~~~~--- 194 (557)
.+.++++.+++.++ +...++.|.+|+..+.............+.++++ +++++++...++.|.+|+........
T Consensus 109 ~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~ 188 (270)
T 1rwi_B 109 YPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPF 188 (270)
T ss_dssp SEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCC
T ss_pred CCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeecc
Confidence 78999999998755 5556789999986555433322223345677887 56666676678899999976553222
Q ss_pred eCCccEEEEEEcCCCcEE-EEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecCCC
Q psy7057 195 IPAMSVWAVAILPNSDIV-TGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPD 273 (557)
Q Consensus 195 ~~~~~v~~v~~~p~g~l~-sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~~ 273 (557)
.....+.++++.++|.+. +...++.|++|+......... ..........+...+.. ...++.+.++.|+++++..+
T Consensus 189 ~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~--~~~~~~~p~~i~~~~~g-~l~v~~~~~~~v~~~~~~~~ 265 (270)
T 1rwi_B 189 TDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVL--PFTGLNTPLAVAVDSDR-TVYVADRGNDRVVKLTSLEH 265 (270)
T ss_dssp SSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEEC--CCCSCSCEEEEEECTTC-CEEEEEGGGTEEEEECCCGG
T ss_pred cCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceee--ccCCCCCceeEEECCCC-CEEEEECCCCEEEEEcCCCc
Confidence 122568899999999855 444578999999876543221 11112345666666554 45688889999999998866
Q ss_pred hh
Q psy7057 274 RQ 275 (557)
Q Consensus 274 ~~ 275 (557)
+.
T Consensus 266 ~~ 267 (270)
T 1rwi_B 266 HH 267 (270)
T ss_dssp GS
T ss_pred cc
Confidence 43
No 194
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.25 E-value=6.2e-10 Score=109.70 Aligned_cols=191 Identities=15% Similarity=0.157 Sum_probs=141.6
Q ss_pred cCCCcEEEEECCCcEEEEcCCC-----------------CCCCCCCCEEEEEECCCeEEEEECCCCeEEEEEccc-CCcE
Q psy7057 21 TPDGCILSASRDKSAKLWKPND-----------------LSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQH-EMAV 82 (557)
Q Consensus 21 spdg~l~sgs~Dg~V~iWd~~~-----------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h-~~~V 82 (557)
+|+..|++++.++.|.+||..+ +...++++.++ +.++.|..||. +++.+..+..+ ...+
T Consensus 3 ~~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~ 79 (276)
T 3no2_A 3 SPQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAGCEM 79 (276)
T ss_dssp CCCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCEE
T ss_pred CCCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCccc
Confidence 4554588999999999999854 24456788887 56888999998 88999988865 3578
Q ss_pred EEEEEcCCC-EEEEEEC-CCeEEEEeCCCcEEEEEeC------CCCCEEEEEEeCCCe-EEEEECCCeEEEEECCCCeEE
Q psy7057 83 WGVIQLANG-IIVTGCA-DKTIKLHSEEGEFLKTLTG------HTDCVRGLAVLNDTD-FVSCSNDASIRVWDSTTGKCV 153 (557)
Q Consensus 83 ~~l~~~~~~-~l~sgs~-dg~I~vwd~~~~~~~~l~~------h~~~V~~l~~~~~~~-lvs~s~Dg~I~vwd~~~~~~~ 153 (557)
.++.+.++| .+++.+. ++.+..++.+|+.+..+.. +......+++.+++. +++.+.++.|..||.. |+.+
T Consensus 80 ~~~~~~~dG~~lv~~~~~~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~ 158 (276)
T 3no2_A 80 QTARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLL 158 (276)
T ss_dssp EEEEECTTSCEEEEEESTTEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCEE
T ss_pred cccEECCCCCEEEEecCCCCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCEE
Confidence 899999999 7777776 7788888988988777652 222455567788877 5577789999999987 9999
Q ss_pred EEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCCce---EeeC------CccEEEEEEcCCCcEEEEEc
Q psy7057 154 HTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQNS---FMIP------AMSVWAVAILPNSDIVTGSS 216 (557)
Q Consensus 154 ~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~~~---~~~~------~~~v~~v~~~p~g~l~sg~~ 216 (557)
.++..+. ...++.. +++.+++++.++.|..+|..+.+. +... ...+..++..++|.++.++.
T Consensus 159 w~~~~~~-~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~ 231 (276)
T 3no2_A 159 NSVKLSG-TPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNW 231 (276)
T ss_dssp EEEECSS-CCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEE
T ss_pred EEEECCC-CccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEec
Confidence 9987643 3344444 678888888888999999775522 2211 12377888889988555554
No 195
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.22 E-value=8.5e-10 Score=124.05 Aligned_cols=217 Identities=13% Similarity=0.078 Sum_probs=145.4
Q ss_pred CcccEEEEEEcCCCc-EEEEEC-C----CcEEEEcCCC---------------CCCCCCCCEEEEEECCCe---------
Q psy7057 11 HSMDVRSLSVTPDGC-ILSASR-D----KSAKLWKPND---------------LSPGAKVNTLLSASWDMT--------- 60 (557)
Q Consensus 11 H~~~V~~l~~spdg~-l~sgs~-D----g~V~iWd~~~---------------~~~~~~~~~l~sgs~Dg~--------- 60 (557)
|...+.+++|||||+ |+.++. + .+|++||+.+ ++++++ +.|+.++.++.
T Consensus 161 ~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~ 239 (741)
T 1yr2_A 161 GATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQAL 239 (741)
T ss_dssp --EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEEEEEESCCCEESTT-SEEEEEECCCC--------C
T ss_pred CCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccCCCceeccEEEECC-CEEEEEEecCcccccccccC
Confidence 444788999999998 665443 2 3599999876 568888 89998887664
Q ss_pred -----EEEEECCCCe----EEEEEcccCCcEEEEEEcCCC-EEEEEECC-----CeEEEEeCCCc--E-EEEEeCCCCCE
Q psy7057 61 -----AKLWCLESQQ----CKLTIRQHEMAVWGVIQLANG-IIVTGCAD-----KTIKLHSEEGE--F-LKTLTGHTDCV 122 (557)
Q Consensus 61 -----i~iwd~~~~~----~~~~l~~h~~~V~~l~~~~~~-~l~sgs~d-----g~I~vwd~~~~--~-~~~l~~h~~~V 122 (557)
|++|++.++. .+.....+...+..+.|+|+| .|+..+.+ ..|.+||..+. . ...+..+...+
T Consensus 240 ~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~ 319 (741)
T 1yr2_A 240 NYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQ 319 (741)
T ss_dssp CCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSC
T ss_pred CCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCce
Confidence 8899987764 222223344468899999999 66665544 37999995443 3 55666666555
Q ss_pred EEEEEeCC-CeEEEEEC----CCeEEEEECCCC--eEEEEEeCCCCcEEEEEE-cCCEEEEEeCCCeEEEEE--CCCC--
Q psy7057 123 RGLAVLND-TDFVSCSN----DASIRVWDSTTG--KCVHTMYGHPNFIYSVAA-HGDLITSGGEDQCVCVYQ--NKAQ-- 190 (557)
Q Consensus 123 ~~l~~~~~-~~lvs~s~----Dg~I~vwd~~~~--~~~~~~~~h~~~V~~l~~-~~~~l~s~s~Dg~I~iwd--~~~~-- 190 (557)
....+ |+ +.|+..+. ++.|.+||+.++ +....+..+...+..+++ .+.++++...|+..++|. +...
T Consensus 320 ~~~~~-~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~~~~lv~~~~~dg~~~l~~~~~~g~~~ 398 (741)
T 1yr2_A 320 WDFVD-GVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIAGNRLFASYIHDAKSQVLAFDLDGKPA 398 (741)
T ss_dssp EEEEE-EETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEEBTEEEEEEEETTEEEEEEEETTSCEE
T ss_pred EEEEe-ccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEECCEEEEEEEECCEEEEEEEeCCCCce
Confidence 55544 55 44666665 345999998874 344444455556777777 455677888899877775 3222
Q ss_pred ceEeeC-CccEEEEEEcCCCc-EE-EEE---cCCcEEEEecCCCC
Q psy7057 191 NSFMIP-AMSVWAVAILPNSD-IV-TGS---SDGIVRVFSANPDR 229 (557)
Q Consensus 191 ~~~~~~-~~~v~~v~~~p~g~-l~-sg~---~Dg~I~iwd~~~~~ 229 (557)
+.+..+ ...+..++++|++. ++ +.+ ..++|++||+.+++
T Consensus 399 ~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 443 (741)
T 1yr2_A 399 GAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAK 443 (741)
T ss_dssp EECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTE
T ss_pred eeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 334333 45688899999987 44 322 35789999987654
No 196
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.20 E-value=2.4e-08 Score=97.84 Aligned_cols=216 Identities=9% Similarity=0.024 Sum_probs=149.3
Q ss_pred cCcccEEEEEEcCCCcEEEEE-CCCcEEEEcCCC----------------CCCCCCCCEEEEEECCCeEEEEECCCCeEE
Q psy7057 10 GHSMDVRSLSVTPDGCILSAS-RDKSAKLWKPND----------------LSPGAKVNTLLSASWDMTAKLWCLESQQCK 72 (557)
Q Consensus 10 gH~~~V~~l~~spdg~l~sgs-~Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~ 72 (557)
.+...+.+++++++|.++.+. .++.|..|+... +..++++..+++...++.|.+|+. +++..
T Consensus 54 ~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~ 132 (299)
T 2z2n_A 54 TPDAKVMCLTISSDGEVWFTENAANKIGRITKKGIIKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIR 132 (299)
T ss_dssp STTCCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEE
T ss_pred cccCceeeEEECCCCCEEEeCCCCCeEEEECCCCcEEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEE
Confidence 345679999999999965554 478899888653 334556777777777889999998 55443
Q ss_pred EE-EcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeCCCcEEEE-EeCCCCCEEEEEEeCCCeEEEEE-CCCeEEEEECC
Q psy7057 73 LT-IRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSEEGEFLKT-LTGHTDCVRGLAVLNDTDFVSCS-NDASIRVWDST 148 (557)
Q Consensus 73 ~~-l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~~~~~~~-l~~h~~~V~~l~~~~~~~lvs~s-~Dg~I~vwd~~ 148 (557)
.. +..+...+.++++.+++ ++++...++.|..||.+++.... +..+...+.++++.+++.+..+. .++.|.+||.
T Consensus 133 ~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~- 211 (299)
T 2z2n_A 133 EYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITESGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT- 211 (299)
T ss_dssp EEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTTCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-
T ss_pred EecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcCCCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-
Confidence 32 33345678999999988 45545557899999986655433 33345678999999988866544 5789999998
Q ss_pred CCeEEEE-EeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC-ceEe--eCCccEEEEEEcCCCcEEEEEcCCcEEE
Q psy7057 149 TGKCVHT-MYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ-NSFM--IPAMSVWAVAILPNSDIVTGSSDGIVRV 222 (557)
Q Consensus 149 ~~~~~~~-~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~-~~~~--~~~~~v~~v~~~p~g~l~sg~~Dg~I~i 222 (557)
+++.... +..+...+.++++ ++.++++...++.|..||.... ..+. .....+.++++ +++.+..+...+.|..
T Consensus 212 ~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~i~~-~~g~l~v~~~~~~l~~ 290 (299)
T 2z2n_A 212 SGEITEFKIPTPNARPHAITAGAGIDLWFTEWGANKIGRLTSNNIIEEYPIQIKSAEPHGICF-DGETIWFAMECDKIGK 290 (299)
T ss_dssp TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEEETTTEEEEEECSSSSCCEEEEEE-CSSCEEEEETTTEEEE
T ss_pred CCcEEEEECCCCCCCceeEEECCCCCEEEeccCCceEEEECCCCceEEEeCCCCCCccceEEe-cCCCEEEEecCCcEEE
Confidence 6664332 2234567889988 4565555557889999997432 2332 22357899999 8888776665677777
Q ss_pred EecCCC
Q psy7057 223 FSANPD 228 (557)
Q Consensus 223 wd~~~~ 228 (557)
++..+.
T Consensus 291 ~~~~~~ 296 (299)
T 2z2n_A 291 LTLIKD 296 (299)
T ss_dssp EEEC--
T ss_pred EEcCcc
Confidence 776643
No 197
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.20 E-value=5.1e-08 Score=105.72 Aligned_cols=270 Identities=14% Similarity=0.089 Sum_probs=178.6
Q ss_pred EEEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCC--C---------------CCCC----CCCCEEEEEEC-CC
Q psy7057 3 KLSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPN--D---------------LSPG----AKVNTLLSASW-DM 59 (557)
Q Consensus 3 kl~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~--~---------------~~~~----~~~~~l~sgs~-Dg 59 (557)
++..++... ..+..+.|+|||+ +++++.|+.|.+||+. + +.++ ++++++++++. ++
T Consensus 188 ~v~~~i~~g-~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~~P~~ia~s~~~~pDGk~l~v~n~~~~ 266 (567)
T 1qks_A 188 EIKTVLDTG-YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPP 266 (567)
T ss_dssp CEEEEEECS-SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEETT
T ss_pred eEEEEEeCC-CCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCCCCceeEEccccCCCCCEEEEEEccCC
Confidence 455556533 3567999999998 7788999999999995 3 5666 58888877664 59
Q ss_pred eEEEEECCCCeEEEEEcc----------c-CCcEEEEEEcCCC--EEEEEECCCeEEEEeCCCc--EEEEEeCCCCCEEE
Q psy7057 60 TAKLWCLESQQCKLTIRQ----------H-EMAVWGVIQLANG--IIVTGCADKTIKLHSEEGE--FLKTLTGHTDCVRG 124 (557)
Q Consensus 60 ~i~iwd~~~~~~~~~l~~----------h-~~~V~~l~~~~~~--~l~sgs~dg~I~vwd~~~~--~~~~l~~h~~~V~~ 124 (557)
++.++|..+.+.+.++.. | ...+..+..++++ .+++...+|.|.++|.... .............+
T Consensus 267 ~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d 346 (567)
T 1qks_A 267 QYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHD 346 (567)
T ss_dssp EEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEE
T ss_pred eEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeeeccccccC
Confidence 999999999988877642 2 2267888888876 5666677899999994332 21122234456788
Q ss_pred EEEeCCCe-EE-EEECCCeEEEEECCCCeEEEEEeC-----CCCcEEEEEE-cCC-EEEEEe-CCCeEEEEECCC-----
Q psy7057 125 LAVLNDTD-FV-SCSNDASIRVWDSTTGKCVHTMYG-----HPNFIYSVAA-HGD-LITSGG-EDQCVCVYQNKA----- 189 (557)
Q Consensus 125 l~~~~~~~-lv-s~s~Dg~I~vwd~~~~~~~~~~~~-----h~~~V~~l~~-~~~-~l~s~s-~Dg~I~iwd~~~----- 189 (557)
+.|+|+++ |+ ++..+++|.++|+.+++.+..+.- |.+.-..+.. ++. .++++. .+++|.++|...
T Consensus 347 ~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~ 426 (567)
T 1qks_A 347 GGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMGDDSVALIGTDPEGHPD 426 (567)
T ss_dssp EEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTT
T ss_pred ceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceeeECCCCCcEEEeCCCCCCeEEEecCCCCCCcc
Confidence 99999988 33 455678999999999998777653 4332222322 333 444443 468999999765
Q ss_pred --C---ceEeeCCccEEEEEEcCCCc-EEEEEc-------CCcEEEEecCCC-----Cc----chhHH---HhcccceeE
Q psy7057 190 --Q---NSFMIPAMSVWAVAILPNSD-IVTGSS-------DGIVRVFSANPD-----RQ----AEDAV---QAQYAEEVK 244 (557)
Q Consensus 190 --~---~~~~~~~~~v~~v~~~p~g~-l~sg~~-------Dg~I~iwd~~~~-----~~----~~~~~---~~~~~~~v~ 244 (557)
. +++......-..+..+|+++ +.+... .++|.++|+.+. .. ..... +......+.
T Consensus 427 ~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 506 (567)
T 1qks_A 427 NAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVV 506 (567)
T ss_dssp TBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEE
T ss_pred ccCEEEEEEecCCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcccccccCCCcEEeccccccccCCCCcceE
Confidence 2 34444333334577899998 544442 459999999866 21 11110 001123456
Q ss_pred EEeccCCCceeEEEEe----CCCcEEEEecCCC
Q psy7057 245 KLKSANEQEIGGVKVS----DDGIVRVFSANPD 273 (557)
Q Consensus 245 ~l~~~~~~~~~~vs~s----~DG~IrvW~~~~~ 273 (557)
.+.+.+......+|.- .++.|.|+|..+.
T Consensus 507 ~~~~~~~G~~~~~s~~~~~~~~~~i~v~D~~t~ 539 (567)
T 1qks_A 507 QGEFNKDGTEVWFSVWNGKDQESALVVVDDKTL 539 (567)
T ss_dssp EEEECTTSSEEEEEEECCTTSCCEEEEEETTTT
T ss_pred eeeECCCCCEEEEEeecCCCCCCcEEEEECCCc
Confidence 6667776665556643 4789999987654
No 198
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.20 E-value=2.7e-09 Score=119.26 Aligned_cols=229 Identities=8% Similarity=-0.022 Sum_probs=149.3
Q ss_pred CCCCCCCCEEEEEECCC-----eEEEEECCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCe---------------
Q psy7057 43 LSPGAKVNTLLSASWDM-----TAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKT--------------- 101 (557)
Q Consensus 43 ~~~~~~~~~l~sgs~Dg-----~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~--------------- 101 (557)
++++|++++|+.++.++ +|++||+.+++.......+ ..+.+++|+|+| .|+.++.++.
T Consensus 130 ~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~-~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~ 208 (710)
T 2xdw_A 130 YAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER-VKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQ 208 (710)
T ss_dssp EEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE-ECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCC
T ss_pred EEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccC-cccceEEEEeCCCEEEEEEECCccccccccccccCCCC
Confidence 56788999998776543 8999999999876533222 225679999998 7888887766
Q ss_pred -EEEEeCCCcE---EEEEe--CCCCCEEEEEEeCCCe-EEEEEC-----CCeEEEEECCC------Ce-EEEEEeCCCCc
Q psy7057 102 -IKLHSEEGEF---LKTLT--GHTDCVRGLAVLNDTD-FVSCSN-----DASIRVWDSTT------GK-CVHTMYGHPNF 162 (557)
Q Consensus 102 -I~vwd~~~~~---~~~l~--~h~~~V~~l~~~~~~~-lvs~s~-----Dg~I~vwd~~~------~~-~~~~~~~h~~~ 162 (557)
|++|+..... ...+. .|...+..+.|+|+++ ++.++. +..|.+||+.+ +. ....+..+...
T Consensus 209 ~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~ 288 (710)
T 2xdw_A 209 KLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEG 288 (710)
T ss_dssp EEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSS
T ss_pred EEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCc
Confidence 9999953321 22223 3556688999999987 444443 56899999876 43 35566666555
Q ss_pred EEE-EEEcCCEEEEEeCC----CeEEEEECCCC-----ceEeeCCc--cEEEEEEcCCCc-EEEEEcCCc--EEEEecCC
Q psy7057 163 IYS-VAAHGDLITSGGED----QCVCVYQNKAQ-----NSFMIPAM--SVWAVAILPNSD-IVTGSSDGI--VRVFSANP 227 (557)
Q Consensus 163 V~~-l~~~~~~l~s~s~D----g~I~iwd~~~~-----~~~~~~~~--~v~~v~~~p~g~-l~sg~~Dg~--I~iwd~~~ 227 (557)
+.. +..+++.|+..+.. ..|.+|++... +.+..+.. .+..+++++++. +++...|+. |++|++.+
T Consensus 289 ~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~ 368 (710)
T 2xdw_A 289 EYDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLAT 368 (710)
T ss_dssp CEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTT
T ss_pred EEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCC
Confidence 544 33378876665543 36999997653 45555544 688899997777 667777885 45566644
Q ss_pred CCcchhHHHhcccceeEEEeccCCCceeEEEEeC---CCcEEEEecCCCh
Q psy7057 228 DRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSD---DGIVRVFSANPDR 274 (557)
Q Consensus 228 ~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~---DG~IrvW~~~~~~ 274 (557)
+..... .......+..+...+......++.++ .++|.+|++.+++
T Consensus 369 g~~~~~--l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 369 GALLKI--FPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp CCEEEE--ECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred CCEEEe--cCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 443211 11224456666665555444455443 5789999987653
No 199
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.19 E-value=8.7e-10 Score=113.00 Aligned_cols=235 Identities=10% Similarity=0.089 Sum_probs=155.0
Q ss_pred CCCcEEEEcCCC--------------CCCCCCCCEEEEEEC----------CCeEEEEECCCCeEEEEEccc------CC
Q psy7057 31 RDKSAKLWKPND--------------LSPGAKVNTLLSASW----------DMTAKLWCLESQQCKLTIRQH------EM 80 (557)
Q Consensus 31 ~Dg~V~iWd~~~--------------~~~~~~~~~l~sgs~----------Dg~i~iwd~~~~~~~~~l~~h------~~ 80 (557)
.|++|.+||..+ +.++++++++++++. +++|.+||+.+++.+.++... ..
T Consensus 29 ~d~~v~v~D~~t~~~~~~i~~g~~p~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~ 108 (361)
T 2oiz_A 29 TESRVHVYDYTNGKFLGMVPTAFNGHVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLN 108 (361)
T ss_dssp GGCEEEEEETTTCCEEEEEECCEEEEEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCC
T ss_pred ccCeEEEEECCCCeEEEEecCCCCCceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCC
Confidence 377999999765 678889999999873 678999999999888877542 24
Q ss_pred cEEEEEEcCCC-EEEEEEC--CCeEEEEeC-CCcEEEE-EeCCCCCEEEEEEeCCC--eEEEEECCCeEEEEECCC-CeE
Q psy7057 81 AVWGVIQLANG-IIVTGCA--DKTIKLHSE-EGEFLKT-LTGHTDCVRGLAVLNDT--DFVSCSNDASIRVWDSTT-GKC 152 (557)
Q Consensus 81 ~V~~l~~~~~~-~l~sgs~--dg~I~vwd~-~~~~~~~-l~~h~~~V~~l~~~~~~--~lvs~s~Dg~I~vwd~~~-~~~ 152 (557)
....++++|+| .|+++.. +++|.+||. +++.+.. +. +.. ...+.+.|++ .+++.+.||.+.+|++.. ++.
T Consensus 109 ~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~-~~~-~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~ 186 (361)
T 2oiz_A 109 YDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTA-AAG-CWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKV 186 (361)
T ss_dssp CGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGG-GTT-EEEEEECTTSSSEEEEEETTSSEEEEEECTTSSE
T ss_pred CcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEec-CCC-cceeEEcCCCCeeEEEECCCCcEEEEEECCCCcE
Confidence 56679999999 6666653 689999994 5555555 33 322 2335667765 488999999999999765 555
Q ss_pred EEEE------eCCCCcEE-EEEEcCCEEEEEeCCCeEEEEECCCC--ce---EeeCC----------ccEEEEEEcCCCc
Q psy7057 153 VHTM------YGHPNFIY-SVAAHGDLITSGGEDQCVCVYQNKAQ--NS---FMIPA----------MSVWAVAILPNSD 210 (557)
Q Consensus 153 ~~~~------~~h~~~V~-~l~~~~~~l~s~s~Dg~I~iwd~~~~--~~---~~~~~----------~~v~~v~~~p~g~ 210 (557)
.... ..+...+. ....++..++..+.++.+.++|+... .. +.... .....++++|++.
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~ 266 (361)
T 2oiz_A 187 ASQSRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASG 266 (361)
T ss_dssp EEEEECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTT
T ss_pred eeeccccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCC
Confidence 4222 11122221 11235666777778899999997543 11 11111 1112378999977
Q ss_pred -EEEEEc-----------CCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecCCC
Q psy7057 211 -IVTGSS-----------DGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPD 273 (557)
Q Consensus 211 -l~sg~~-----------Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~~ 273 (557)
++++.. .+.|.+||..+.+......... ...+.+.++.. .+++++. +.|+|||..+.
T Consensus 267 ~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~----p~~ia~spdg~-~l~v~n~-~~v~v~D~~t~ 335 (361)
T 2oiz_A 267 RMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD----ALSMTIDQQRN-LMLTLDG-GNVNVYDISQP 335 (361)
T ss_dssp EEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT----CCEEEEETTTT-EEEEECS-SCEEEEECSSS
T ss_pred eEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC----eeEEEECCCCC-EEEEeCC-CeEEEEECCCC
Confidence 444432 3489999998876554332221 66777777766 4555555 99999998765
No 200
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.16 E-value=1.4e-08 Score=100.79 Aligned_cols=219 Identities=10% Similarity=0.069 Sum_probs=146.8
Q ss_pred eccCcccEEEEEEcCCCcEEEE--------ECCCcEEEEcCCC--------------------CCCCCCCCEEEEEECCC
Q psy7057 8 LYGHSMDVRSLSVTPDGCILSA--------SRDKSAKLWKPND--------------------LSPGAKVNTLLSASWDM 59 (557)
Q Consensus 8 l~gH~~~V~~l~~spdg~l~sg--------s~Dg~V~iWd~~~--------------------~~~~~~~~~l~sgs~Dg 59 (557)
+...-....+++|+++|.|+.+ ..++.|.+|+..+ +.+++++..|..++...
T Consensus 13 ~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~~ 92 (314)
T 1pjx_A 13 VTEDIPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMRL 92 (314)
T ss_dssp EECCCTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETTT
T ss_pred hhccCCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECCC
Confidence 3444456789999999985544 7789999998644 22334424555555556
Q ss_pred eEEEEECCCCeEEEE-Ecc----cCCcEEEEEEcCCC-EEEEEECC---------------CeEEEEeCCCcEEEEEeCC
Q psy7057 60 TAKLWCLESQQCKLT-IRQ----HEMAVWGVIQLANG-IIVTGCAD---------------KTIKLHSEEGEFLKTLTGH 118 (557)
Q Consensus 60 ~i~iwd~~~~~~~~~-l~~----h~~~V~~l~~~~~~-~l~sgs~d---------------g~I~vwd~~~~~~~~l~~h 118 (557)
.|.+|+.. ++.... ... ....+.++++.+++ ++++...+ +.|..++..++.... ..+
T Consensus 93 ~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~-~~~ 170 (314)
T 1pjx_A 93 GLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTDGQMIQV-DTA 170 (314)
T ss_dssp EEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTTSCEEEE-EEE
T ss_pred CEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCCCCEEEe-ccC
Confidence 89999988 665432 211 12457899999998 44444333 567777766554333 333
Q ss_pred CCCEEEEEEe----CCCe-EE-EEECCCeEEEEECC-CCe-----EEEEEeCCC-CcEEEEEE--cCCEEEEEeCCCeEE
Q psy7057 119 TDCVRGLAVL----NDTD-FV-SCSNDASIRVWDST-TGK-----CVHTMYGHP-NFIYSVAA--HGDLITSGGEDQCVC 183 (557)
Q Consensus 119 ~~~V~~l~~~----~~~~-lv-s~s~Dg~I~vwd~~-~~~-----~~~~~~~h~-~~V~~l~~--~~~~l~s~s~Dg~I~ 183 (557)
......++++ +++. ++ +.+.++.|.+||+. +++ ....+..+. ..+..+++ ++.++++...++.|.
T Consensus 171 ~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~ 250 (314)
T 1pjx_A 171 FQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIE 250 (314)
T ss_dssp ESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEE
T ss_pred CCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEE
Confidence 4457889999 9985 44 55567899999976 454 222333343 56788888 567777777889999
Q ss_pred EEECCCC---ceEeeCCccEEEEEEcCCCc-EEEEE-cCCcEEEEecCCC
Q psy7057 184 VYQNKAQ---NSFMIPAMSVWAVAILPNSD-IVTGS-SDGIVRVFSANPD 228 (557)
Q Consensus 184 iwd~~~~---~~~~~~~~~v~~v~~~p~g~-l~sg~-~Dg~I~iwd~~~~ 228 (557)
+|+..+. ..+..+...+.+++++|+++ |++++ .++.|..|+....
T Consensus 251 ~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~~ 300 (314)
T 1pjx_A 251 VFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQRN 300 (314)
T ss_dssp EECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSSC
T ss_pred EEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCCC
Confidence 9997633 45555667899999999998 65554 4678999998643
No 201
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.15 E-value=2.9e-09 Score=105.33 Aligned_cols=212 Identities=11% Similarity=0.035 Sum_probs=139.4
Q ss_pred CCCCCCCC-EEEEEECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeC-CCcEEEEEeCC-
Q psy7057 43 LSPGAKVN-TLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSE-EGEFLKTLTGH- 118 (557)
Q Consensus 43 ~~~~~~~~-~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~-~~~~~~~l~~h- 118 (557)
+.++++++ .++++..++.|..|+..++ ...+..+...+.++++++++ ++++...++.|.+||. +++........
T Consensus 33 ~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~ 110 (296)
T 3e5z_A 33 PVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEWESIADSFE 110 (296)
T ss_dssp EEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCEEEEECEET
T ss_pred CeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCcEEEEeeccC
Confidence 33455677 7788888999999999887 56676778889999999999 5555545689999996 66654333221
Q ss_pred ---CCCEEEEEEeCCCeEEEE-----E-------------CCCeEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEE
Q psy7057 119 ---TDCVRGLAVLNDTDFVSC-----S-------------NDASIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITS 175 (557)
Q Consensus 119 ---~~~V~~l~~~~~~~lvs~-----s-------------~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s 175 (557)
...+.+++++|+|.++.+ + ..+.|..++.. ++ +..+..+......+++ +++.+++
T Consensus 111 ~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~-~~~~~~~~~~~~gi~~s~dg~~lv~ 188 (296)
T 3e5z_A 111 GKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GT-LSAPIRDRVKPNGLAFLPSGNLLVS 188 (296)
T ss_dssp TEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SC-EEEEECCCSSEEEEEECTTSCEEEE
T ss_pred CCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CC-EEEeecCCCCCccEEECCCCCEEEE
Confidence 234678999999886642 2 13456666654 44 3445556677788998 6777777
Q ss_pred EeCCCeEEEEECCC-Cc------eEeeCCccEEEEEEcCCCcEEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEec
Q psy7057 176 GGEDQCVCVYQNKA-QN------SFMIPAMSVWAVAILPNSDIVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKS 248 (557)
Q Consensus 176 ~s~Dg~I~iwd~~~-~~------~~~~~~~~v~~v~~~p~g~l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~ 248 (557)
.+.++.|++|+... .. .+..+...+..+++.++|.+.+++ ++.|++|+... +..... ..... +..+.+
T Consensus 189 ~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~-~~~v~~~~~~g-~~~~~~--~~~~~-~~~~~f 263 (296)
T 3e5z_A 189 DTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA-GDGVHVLTPDG-DELGRV--LTPQT-TSNLCF 263 (296)
T ss_dssp ETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE-TTEEEEECTTS-CEEEEE--ECSSC-CCEEEE
T ss_pred eCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc-CCeEEEECCCC-CEEEEE--ECCCC-ceeEEE
Confidence 77889999999652 11 121233456789999999976666 88999999863 322111 11222 455555
Q ss_pred cCCCceeEEEEeCCC
Q psy7057 249 ANEQEIGGVKVSDDG 263 (557)
Q Consensus 249 ~~~~~~~~vs~s~DG 263 (557)
...+...+..++.+|
T Consensus 264 ~~~d~~~L~v~t~~~ 278 (296)
T 3e5z_A 264 GGPEGRTLYMTVSTE 278 (296)
T ss_dssp ESTTSCEEEEEETTE
T ss_pred ECCCCCEEEEEcCCe
Confidence 333333455555554
No 202
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.14 E-value=1.9e-08 Score=104.89 Aligned_cols=211 Identities=10% Similarity=0.082 Sum_probs=147.4
Q ss_pred ccEEEEEEcCCCcEE-EEECCCcEEEEcCCC--------------CCCCCCCCEEEEEECCC--eEEEEECCCCeEEEEE
Q psy7057 13 MDVRSLSVTPDGCIL-SASRDKSAKLWKPND--------------LSPGAKVNTLLSASWDM--TAKLWCLESQQCKLTI 75 (557)
Q Consensus 13 ~~V~~l~~spdg~l~-sgs~Dg~V~iWd~~~--------------~~~~~~~~~l~sgs~Dg--~i~iwd~~~~~~~~~l 75 (557)
.....|+|+++++|+ +...++.|++||..+ +.++++++.|+++..++ .|.+++..++.....+
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~~~ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~ 210 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKGGKPAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRI 210 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCCBCBCEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEE
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCCCCceeEecCCCcEEEEecCCCceEEEEEcCCCceeEEe
Confidence 467899999999955 555678999999875 44567788888888866 7888888765443344
Q ss_pred ----cccCCcEEEEEEcC-CCEEEEEECCCeEEEEeCCCcEEEEE-----eCCCCCE-E-EEEEeCC-CeEE-EEECCCe
Q psy7057 76 ----RQHEMAVWGVIQLA-NGIIVTGCADKTIKLHSEEGEFLKTL-----TGHTDCV-R-GLAVLND-TDFV-SCSNDAS 141 (557)
Q Consensus 76 ----~~h~~~V~~l~~~~-~~~l~sgs~dg~I~vwd~~~~~~~~l-----~~h~~~V-~-~l~~~~~-~~lv-s~s~Dg~ 141 (557)
......+.+++++| ++.|+.+..++.|+.||..+.....+ .++...- . .++++|+ +.|+ +-+..+.
T Consensus 211 g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~ 290 (409)
T 3hrp_A 211 GQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSS 290 (409)
T ss_dssp EECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTE
T ss_pred eeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCE
Confidence 22456678899999 66666677788999999654433333 2222222 3 8999994 6644 6667889
Q ss_pred EEEEECCCCeEEEEEeCCC---------------CcEEEEEE--cCCEEEEEe-CCCeEEEEECCCC--ceEeeC-----
Q psy7057 142 IRVWDSTTGKCVHTMYGHP---------------NFIYSVAA--HGDLITSGG-EDQCVCVYQNKAQ--NSFMIP----- 196 (557)
Q Consensus 142 I~vwd~~~~~~~~~~~~h~---------------~~V~~l~~--~~~~l~s~s-~Dg~I~iwd~~~~--~~~~~~----- 196 (557)
|+.|+... + +..+.++. .....+++ +++++++-+ .+++|+.|+.... ..+.++
T Consensus 291 I~~~~~~g-~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v~~~~g~~~~~g 368 (409)
T 3hrp_A 291 VYKITPDG-E-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYVSTVAGQVDVAS 368 (409)
T ss_dssp EEEECTTC-C-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEEEEEEECTTCBS
T ss_pred EEEEecCC-C-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEEEEEeCCCCCCC
Confidence 99999653 3 33444432 34678888 567777777 7899999995444 344443
Q ss_pred ----------CccEEEEEEcCCCc-EEEEEcCCcEEEEec
Q psy7057 197 ----------AMSVWAVAILPNSD-IVTGSSDGIVRVFSA 225 (557)
Q Consensus 197 ----------~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~ 225 (557)
-.....+++.+++. +++-..++.|+.+++
T Consensus 369 ~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 369 QIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp CCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred cCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 13588999999988 555566788888765
No 203
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.13 E-value=7.5e-08 Score=94.35 Aligned_cols=216 Identities=12% Similarity=0.082 Sum_probs=150.1
Q ss_pred ccCcccEEEEEEcCCCcEEEEE-CCCcEEEEcCCC----------------CCCCCCCCEEEEEECCCeEEEEECCCCeE
Q psy7057 9 YGHSMDVRSLSVTPDGCILSAS-RDKSAKLWKPND----------------LSPGAKVNTLLSASWDMTAKLWCLESQQC 71 (557)
Q Consensus 9 ~gH~~~V~~l~~spdg~l~sgs-~Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~ 71 (557)
......+.+|++.++|+|..+. .++.|.+|+... +..++++..+++...++.|..+|.. ++.
T Consensus 16 ~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~ 94 (300)
T 2qc5_A 16 SIPDSGPYGITSSEDGKVWFTQHKANKISSLDQSGRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGF 94 (300)
T ss_dssp SSTTCCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE
T ss_pred CCCCCCcceeeECCCCCEEEEcCCCCeEEEECCCCceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCe
Confidence 3456788999999999966555 578899998763 3344567766666667889999987 554
Q ss_pred E-EEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeCCCcEEEE-EeCCCCCEEEEEEeCCCeEEEE-ECCCeEEEEEC
Q psy7057 72 K-LTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSEEGEFLKT-LTGHTDCVRGLAVLNDTDFVSC-SNDASIRVWDS 147 (557)
Q Consensus 72 ~-~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~~~~~~~-l~~h~~~V~~l~~~~~~~lvs~-s~Dg~I~vwd~ 147 (557)
. ..+......+.++++.+++ ++++...++.|..++..++.... +......+.++++.+++.+..+ ..++.|..+|.
T Consensus 95 ~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~ 174 (300)
T 2qc5_A 95 TEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTADGTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN 174 (300)
T ss_dssp EEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTTSCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT
T ss_pred EEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCCCCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC
Confidence 3 2223245678999999988 55555557899999977665432 2334567899999998886544 45788999997
Q ss_pred CCCeEEEE-EeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC-ceEe--eCCccEEEEEEcCCCcEEEEE-cCCcE
Q psy7057 148 TTGKCVHT-MYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ-NSFM--IPAMSVWAVAILPNSDIVTGS-SDGIV 220 (557)
Q Consensus 148 ~~~~~~~~-~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~-~~~~--~~~~~v~~v~~~p~g~l~sg~-~Dg~I 220 (557)
+++.... ...+...+.++++ ++.++++....+.|.+|+.... ..+. .....+.++++.++|.+..+. .++.|
T Consensus 175 -~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i 253 (300)
T 2qc5_A 175 -TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITTTGEISEYDIPTPNARPHAITAGKNSEIWFTEWGANQI 253 (300)
T ss_dssp -TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECTTCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEE
T ss_pred -CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcCCCcEEEEECCCCCCCceEEEECCCCCEEEeccCCCeE
Confidence 5655432 2234456888888 4566666666778999997333 2222 234568899999999865555 46889
Q ss_pred EEEecC
Q psy7057 221 RVFSAN 226 (557)
Q Consensus 221 ~iwd~~ 226 (557)
..|+..
T Consensus 254 ~~~~~~ 259 (300)
T 2qc5_A 254 GRITND 259 (300)
T ss_dssp EEECTT
T ss_pred EEECCC
Confidence 999874
No 204
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.11 E-value=1.2e-08 Score=103.01 Aligned_cols=212 Identities=11% Similarity=0.072 Sum_probs=147.0
Q ss_pred ccEEEEEEcCCCc-EEEEECCCcEEEEcCCC---------------CCCCCCCCEEEEEE-CCCeEEEEECCCCeEEEEE
Q psy7057 13 MDVRSLSVTPDGC-ILSASRDKSAKLWKPND---------------LSPGAKVNTLLSAS-WDMTAKLWCLESQQCKLTI 75 (557)
Q Consensus 13 ~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~---------------~~~~~~~~~l~sgs-~Dg~i~iwd~~~~~~~~~l 75 (557)
....++++.. ++ +++...+++|.+||..+ +.+++++ .+..+. .++.|.+||+.+++....+
T Consensus 44 ~~~~~i~~~~-~~lyv~~~~~~~v~viD~~t~~~~~~i~~~~~p~~i~~~~~g-~lyv~~~~~~~v~~iD~~t~~~~~~i 121 (328)
T 3dsm_A 44 DVAQSMVIRD-GIGWIVVNNSHVIFAIDINTFKEVGRITGFTSPRYIHFLSDE-KAYVTQIWDYRIFIINPKTYEITGYI 121 (328)
T ss_dssp SCEEEEEEET-TEEEEEEGGGTEEEEEETTTCCEEEEEECCSSEEEEEEEETT-EEEEEEBSCSEEEEEETTTTEEEEEE
T ss_pred ccceEEEEEC-CEEEEEEcCCCEEEEEECcccEEEEEcCCCCCCcEEEEeCCC-eEEEEECCCCeEEEEECCCCeEEEEE
Confidence 3467787753 45 55666789999999986 3444556 455555 8999999999999888777
Q ss_pred cccC-----CcEEEEEEcCCCEEEEEE--CCCeEEEEeC-CCcEEEEEeCCCCCEEEEEEeCCCeEEEEEC-C-------
Q psy7057 76 RQHE-----MAVWGVIQLANGIIVTGC--ADKTIKLHSE-EGEFLKTLTGHTDCVRGLAVLNDTDFVSCSN-D------- 139 (557)
Q Consensus 76 ~~h~-----~~V~~l~~~~~~~l~sgs--~dg~I~vwd~-~~~~~~~l~~h~~~V~~l~~~~~~~lvs~s~-D------- 139 (557)
.... .....+++ .++.++.+. .++.|.++|. +++.+..+.. ......++++++++++.++. +
T Consensus 122 ~~g~~~~~~~~p~~i~~-~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~-g~~p~~i~~~~dG~l~v~~~~~~~~~~~~ 199 (328)
T 3dsm_A 122 ECPDMDMESGSTEQMVQ-YGKYVYVNCWSYQNRILKIDTETDKVVDELTI-GIQPTSLVMDKYNKMWTITDGGYEGSPYG 199 (328)
T ss_dssp ECTTCCTTTCBCCCEEE-ETTEEEEEECTTCCEEEEEETTTTEEEEEEEC-SSCBCCCEECTTSEEEEEBCCBCTTCSSC
T ss_pred EcCCccccCCCcceEEE-ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEc-CCCccceEEcCCCCEEEEECCCccCCccc
Confidence 5433 14456676 455555554 4889999994 5666666653 33467888999998664443 3
Q ss_pred ---CeEEEEECCCCeEEEEEeCC-CCcEEEEEE--cCCEEEEEeCCCeEEEEECCCCceE-----eeCCccEEEEEEcCC
Q psy7057 140 ---ASIRVWDSTTGKCVHTMYGH-PNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQNSF-----MIPAMSVWAVAILPN 208 (557)
Q Consensus 140 ---g~I~vwd~~~~~~~~~~~~h-~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~~~~-----~~~~~~v~~v~~~p~ 208 (557)
+.|.++|..+++....+... ......+++ +++.|+++.. .|.+||..+.... .........++++|+
T Consensus 200 ~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~ 277 (328)
T 3dsm_A 200 YEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN--DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPN 277 (328)
T ss_dssp BCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS--SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTT
T ss_pred cCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc--EEEEEECCCCceeeeeeecCCCCceEEEEEcCC
Confidence 68999999999888777532 236788888 4677777655 8999997654221 111356899999994
Q ss_pred -CcEE-EE----EcCCcEEEEecCCCCcc
Q psy7057 209 -SDIV-TG----SSDGIVRVFSANPDRQA 231 (557)
Q Consensus 209 -g~l~-sg----~~Dg~I~iwd~~~~~~~ 231 (557)
+.+. +. ..++.|.+|+.. ++..
T Consensus 278 ~g~lyva~~~~y~~~~~V~v~d~~-g~~~ 305 (328)
T 3dsm_A 278 NGEVYVADAIDYQQQGIVYRYSPQ-GKLI 305 (328)
T ss_dssp TCCEEEEECTTSSSEEEEEEECTT-CCEE
T ss_pred CCeEEEEcccccccCCEEEEECCC-CCEE
Confidence 5554 44 468999999987 5443
No 205
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.07 E-value=6.1e-08 Score=105.12 Aligned_cols=222 Identities=9% Similarity=-0.005 Sum_probs=155.0
Q ss_pred CCEEEEEECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeC---CCcEEEEEeCCCCCEEE
Q psy7057 49 VNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSE---EGEFLKTLTGHTDCVRG 124 (557)
Q Consensus 49 ~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~---~~~~~~~l~~h~~~V~~ 124 (557)
+..+++...+++|.++|..+++.+.++... ..+..+.++|++ ++++++.|+.|.+||. +++.+..+... ...+.
T Consensus 167 ~~~~V~~~~~~~V~viD~~t~~v~~~i~~g-~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G-~~P~~ 244 (567)
T 1qks_A 167 NLFSVTLRDAGQIALIDGSTYEIKTVLDTG-YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIG-SEARS 244 (567)
T ss_dssp GEEEEEETTTTEEEEEETTTCCEEEEEECS-SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECC-SEEEE
T ss_pred ceEEEEeCCCCeEEEEECCCCeEEEEEeCC-CCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecC-CCCce
Confidence 456677778899999999999998888643 356789999999 7888899999999996 66777777653 34789
Q ss_pred EEEe----CCCe-E-EEEECCCeEEEEECCCCeEEEEEeCC----------CC-cEEEEEE--c-CCEEEEEeCCCeEEE
Q psy7057 125 LAVL----NDTD-F-VSCSNDASIRVWDSTTGKCVHTMYGH----------PN-FIYSVAA--H-GDLITSGGEDQCVCV 184 (557)
Q Consensus 125 l~~~----~~~~-l-vs~s~Dg~I~vwd~~~~~~~~~~~~h----------~~-~V~~l~~--~-~~~l~s~s~Dg~I~i 184 (557)
++++ |+++ + ++...+++|.++|..+.+.+.++... .. .+..+.. + +.++++...+|.|.+
T Consensus 245 ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~ 324 (567)
T 1qks_A 245 IETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILL 324 (567)
T ss_dssp EEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEE
T ss_pred eEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEE
Confidence 9999 6886 3 35667799999999999998877521 12 5666666 2 346667778899999
Q ss_pred EECCCCceE----eeCCccEEEEEEcCCCc-EEE-EEcCCcEEEEecCCCCcchhHHH-h--cccceeEEEeccCCCcee
Q psy7057 185 YQNKAQNSF----MIPAMSVWAVAILPNSD-IVT-GSSDGIVRVFSANPDRQAEDAVQ-A--QYAEEVKKLKSANEQEIG 255 (557)
Q Consensus 185 wd~~~~~~~----~~~~~~v~~v~~~p~g~-l~s-g~~Dg~I~iwd~~~~~~~~~~~~-~--~~~~~v~~l~~~~~~~~~ 255 (557)
+|......+ .........+.|+|+++ +++ +..++.|.++|..+.+....... . .|.+.-..+ +.+.....
T Consensus 325 vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~-~~p~~g~v 403 (567)
T 1qks_A 325 VDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANF-VHPTFGPV 403 (567)
T ss_dssp EETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEE-EETTTEEE
T ss_pred EecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceee-ECCCCCcE
Confidence 997654211 12334677899999999 444 44688999999998765432222 1 121111111 23332333
Q ss_pred EEEEe-CCCcEEEEecCCC
Q psy7057 256 GVKVS-DDGIVRVFSANPD 273 (557)
Q Consensus 256 ~vs~s-~DG~IrvW~~~~~ 273 (557)
.++.. .+++|.+++..++
T Consensus 404 ~~t~~~g~~~Vsvid~~~~ 422 (567)
T 1qks_A 404 WATSHMGDDSVALIGTDPE 422 (567)
T ss_dssp EEEEBSSSSEEEEEECCTT
T ss_pred EEeCCCCCCeEEEecCCCC
Confidence 34443 5789999998874
No 206
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.06 E-value=9.5e-08 Score=94.66 Aligned_cols=211 Identities=12% Similarity=0.021 Sum_probs=140.5
Q ss_pred cEEEEEeccCcccEEEEEEcCCC-c-EEEEECCCcEEEEcCCC--------------CCCCCCCCEEEEEECCCeEEEEE
Q psy7057 2 YKLSTALYGHSMDVRSLSVTPDG-C-ILSASRDKSAKLWKPND--------------LSPGAKVNTLLSASWDMTAKLWC 65 (557)
Q Consensus 2 ~kl~~~l~gH~~~V~~l~~spdg-~-l~sgs~Dg~V~iWd~~~--------------~~~~~~~~~l~sgs~Dg~i~iwd 65 (557)
.+....+..+..---+..|+|++ . +++...++.|..||..+ +.++++++++++ . +..|.+||
T Consensus 2 ~~~~~~~~~~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~dG~l~v~-~-~~~l~~~d 79 (297)
T 3g4e_A 2 IKIECVLPENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQRVTMDAPVSSVALRQSGGYVAT-I-GTKFCALN 79 (297)
T ss_dssp CEEEEEECCCCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECSSCEEEEEEBTTSSEEEE-E-TTEEEEEE
T ss_pred ccEEEEeccCCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcEEEEeCCCceEEEEECCCCCEEEE-E-CCeEEEEE
Confidence 34555566666667789999964 4 45666789999999875 456677885444 4 56899999
Q ss_pred CCCCeEEEEEcc----cCCcEEEEEEcCCCEEEEEE-C-----------CCeEEEEeCCCcEEEEEeCCCCCEEEEEEeC
Q psy7057 66 LESQQCKLTIRQ----HEMAVWGVIQLANGIIVTGC-A-----------DKTIKLHSEEGEFLKTLTGHTDCVRGLAVLN 129 (557)
Q Consensus 66 ~~~~~~~~~l~~----h~~~V~~l~~~~~~~l~sgs-~-----------dg~I~vwd~~~~~~~~l~~h~~~V~~l~~~~ 129 (557)
.++++....... ....+..+++.|+|.+..++ . .+.|..++..+.... +..+......++|+|
T Consensus 80 ~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~-~~~~~~~pngi~~sp 158 (297)
T 3g4e_A 80 WKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKK-YFDQVDISNGLDWSL 158 (297)
T ss_dssp TTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEE-EEEEESBEEEEEECT
T ss_pred CCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEE-EeeccccccceEEcC
Confidence 988765433322 13458899999999444443 1 234555555554433 333445578999999
Q ss_pred CCe-E-EEEECCCeEEEEEC--CCCeEE-----EEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC---ceEee
Q psy7057 130 DTD-F-VSCSNDASIRVWDS--TTGKCV-----HTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ---NSFMI 195 (557)
Q Consensus 130 ~~~-l-vs~s~Dg~I~vwd~--~~~~~~-----~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~---~~~~~ 195 (557)
+++ + ++.+.++.|.+|++ .++... ..+..+......+++ +|+++++....+.|..||..+. ..+..
T Consensus 159 dg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~ 238 (297)
T 3g4e_A 159 DHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKL 238 (297)
T ss_dssp TSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEEC
T ss_pred CCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEEC
Confidence 986 4 46667889999987 455432 222233456778888 5677777778889999997643 55566
Q ss_pred CCccEEEEEEc-CCCc-EEEEE
Q psy7057 196 PAMSVWAVAIL-PNSD-IVTGS 215 (557)
Q Consensus 196 ~~~~v~~v~~~-p~g~-l~sg~ 215 (557)
+...+++++|. |+++ |++++
T Consensus 239 p~~~~t~~~f~g~d~~~L~vt~ 260 (297)
T 3g4e_A 239 PVDKTTSCCFGGKNYSEMYVTC 260 (297)
T ss_dssp SSSBEEEEEEESGGGCEEEEEE
T ss_pred CCCCceEEEEeCCCCCEEEEEc
Confidence 66789999998 7776 44333
No 207
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.03 E-value=6.5e-09 Score=115.96 Aligned_cols=225 Identities=9% Similarity=-0.030 Sum_probs=141.9
Q ss_pred CCCCCCCCEEE-----EEECCCeEEEEECCCCeEEEEEcccCCcE--EEEEEcCCC-EEEEEECCCe-------------
Q psy7057 43 LSPGAKVNTLL-----SASWDMTAKLWCLESQQCKLTIRQHEMAV--WGVIQLANG-IIVTGCADKT------------- 101 (557)
Q Consensus 43 ~~~~~~~~~l~-----sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V--~~l~~~~~~-~l~sgs~dg~------------- 101 (557)
++++|++++|+ .|+.+.+|++||+.+++.+. ..+...+ ..++|+|+| .|+.++.|..
T Consensus 126 ~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~--~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~ 203 (695)
T 2bkl_A 126 WAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSK--VDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTT 203 (695)
T ss_dssp EEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCS--SCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCE
T ss_pred EEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcC--CcccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCE
Confidence 56788999988 44455789999999987541 1121122 578999999 8888888776
Q ss_pred EEEEeCC-Cc----EEEEEeCCCCCEEEEEEeCCCe-EEEEECCC----eEEEEECCCCeEEEEEeCCCCcEEEEEE-cC
Q psy7057 102 IKLHSEE-GE----FLKTLTGHTDCVRGLAVLNDTD-FVSCSNDA----SIRVWDSTTGKCVHTMYGHPNFIYSVAA-HG 170 (557)
Q Consensus 102 I~vwd~~-~~----~~~~l~~h~~~V~~l~~~~~~~-lvs~s~Dg----~I~vwd~~~~~~~~~~~~h~~~V~~l~~-~~ 170 (557)
|++|+.. +. ++.....|...+.++.++|+|+ ++.++.++ .|.+|+..+++. ..+..+...+....+ ++
T Consensus 204 v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~-~~l~~~~~~~~~~~~~~g 282 (695)
T 2bkl_A 204 IRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDF-RLLVKGVGAKYEVHAWKD 282 (695)
T ss_dssp EEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSC-EEEEECSSCCEEEEEETT
T ss_pred EEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCce-EEeecCCCceEEEEecCC
Confidence 9999953 22 3333345667889999999987 55555554 677777655543 344445544455444 66
Q ss_pred CEEEEEeC----CCeEEEEECCCC-----ceEeeC--CccEEEEEEcCCCc-EEEEEcCCcEEEEecCC-CCcchhHHHh
Q psy7057 171 DLITSGGE----DQCVCVYQNKAQ-----NSFMIP--AMSVWAVAILPNSD-IVTGSSDGIVRVFSANP-DRQAEDAVQA 237 (557)
Q Consensus 171 ~~l~s~s~----Dg~I~iwd~~~~-----~~~~~~--~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~-~~~~~~~~~~ 237 (557)
. ++..+. ++.|.+|++.+. +.+..+ ...+..++++ ++. +++...|+..+||.++. +........
T Consensus 283 ~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~- 359 (695)
T 2bkl_A 283 R-FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVATLKGKPVRTVQL- 359 (695)
T ss_dssp E-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEETTCCEEEECCC-
T ss_pred c-EEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCeeEEecC-
Confidence 6 554443 578999997543 344333 3457888888 555 77888899988887652 221111110
Q ss_pred cccceeEEEeccCCCceeEEEEe---CCCcEEEEecCCC
Q psy7057 238 QYAEEVKKLKSANEQEIGGVKVS---DDGIVRVFSANPD 273 (557)
Q Consensus 238 ~~~~~v~~l~~~~~~~~~~vs~s---~DG~IrvW~~~~~ 273 (557)
.....+..+.+.+......++.+ ..++|++|++.++
T Consensus 360 ~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g 398 (695)
T 2bkl_A 360 PGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTG 398 (695)
T ss_dssp SSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTC
T ss_pred CCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCC
Confidence 11334444555554444444444 3578999998764
No 208
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=98.99 E-value=1.9e-08 Score=103.43 Aligned_cols=167 Identities=8% Similarity=-0.010 Sum_probs=122.5
Q ss_pred cEEEEEEcCCC-EEEEEECCCeEEEEeC---C---------CcEEEEEeCCCCCEEEEEEeCCCe-EEEEECCCeEEEEE
Q psy7057 81 AVWGVIQLANG-IIVTGCADKTIKLHSE---E---------GEFLKTLTGHTDCVRGLAVLNDTD-FVSCSNDASIRVWD 146 (557)
Q Consensus 81 ~V~~l~~~~~~-~l~sgs~dg~I~vwd~---~---------~~~~~~l~~h~~~V~~l~~~~~~~-lvs~s~Dg~I~vwd 146 (557)
.+..+++++.. ++++|+.+ .+++|+. . -++... ..+.. |+.|+| ++. |+++ .++.|++||
T Consensus 39 ~~nlLais~~~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~-~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~d 112 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWE-KEIPD-VIFVCF--HGDQVLVS-TRNALYSLD 112 (388)
T ss_dssp CCBCEEEETTTTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEE-EECTT-EEEEEE--ETTEEEEE-ESSEEEEEE
T ss_pred cccEEEEcCCCCEEEEeCCC-EEEEEEhhHhhhhhccccccccceEE-eeCCC-eeEEEE--CCCEEEEE-cCCcEEEEE
Confidence 67889999876 88888887 4555971 1 122122 23666 999999 544 5555 889999999
Q ss_pred CCCCeEEEEEeCCCCcEEEEEEcCCEEEEEeCCCeEEEEECCCCceEeeCCccEEEEEEcCCCcEEEEEcCCcEEEEecC
Q psy7057 147 STTGKCVHTMYGHPNFIYSVAAHGDLITSGGEDQCVCVYQNKAQNSFMIPAMSVWAVAILPNSDIVTGSSDGIVRVFSAN 226 (557)
Q Consensus 147 ~~~~~~~~~~~~h~~~V~~l~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~v~~v~~~p~g~l~sg~~Dg~I~iwd~~ 226 (557)
+++.........|...+.++.+....+++++.||.|.+||++...... +...|+|++|+|+| ++.|..||++++|+..
T Consensus 113 v~sl~~~~~~~~~~~~v~~i~~~~p~~av~~~dG~L~v~dl~~~~~~~-~~~~Vs~v~WSpkG-~~vg~~dg~i~~~~~~ 190 (388)
T 1xip_A 113 LEELSEFRTVTSFEKPVFQLKNVNNTLVILNSVNDLSALDLRTKSTKQ-LAQNVTSFDVTNSQ-LAVLLKDRSFQSFAWR 190 (388)
T ss_dssp SSSTTCEEEEEECSSCEEEEEECSSEEEEEETTSEEEEEETTTCCEEE-EEESEEEEEECSSE-EEEEETTSCEEEEEEE
T ss_pred chhhhccCccceeecceeeEEecCCCEEEEECCCCEEEEEccCCcccc-ccCCceEEEEcCCc-eEEEEcCCcEEEEcCC
Confidence 987766666777888898888844459999999999999998764433 45689999999999 8889999999999887
Q ss_pred CCCc---ch---hHHHh---cccceeEEEeccCCCcee
Q psy7057 227 PDRQ---AE---DAVQA---QYAEEVKKLKSANEQEIG 255 (557)
Q Consensus 227 ~~~~---~~---~~~~~---~~~~~v~~l~~~~~~~~~ 255 (557)
.... .. ..... .+...+.++.+.......
T Consensus 191 ~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~fl 228 (388)
T 1xip_A 191 NGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFL 228 (388)
T ss_dssp TTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEE
T ss_pred CccccccceecCCcccccccCCCeeEEEEEEecCCeEE
Confidence 6552 11 11122 245778888888765543
No 209
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.98 E-value=9.4e-09 Score=102.72 Aligned_cols=251 Identities=13% Similarity=0.009 Sum_probs=170.0
Q ss_pred CcccEEEEEEcCCCcEEEEECCCcEEEEcCCC-----CC--------CCCCCCEEEEEECCCeEEEEECCCCeEEEEEcc
Q psy7057 11 HSMDVRSLSVTPDGCILSASRDKSAKLWKPND-----LS--------PGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQ 77 (557)
Q Consensus 11 H~~~V~~l~~spdg~l~sgs~Dg~V~iWd~~~-----~~--------~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~ 77 (557)
+...+.++...++|.|+.++.+ |..+|... .. ..-....+..++.++.+..+|.. ++.......
T Consensus 58 ~~~~~~~~~~~~~g~l~v~t~~--l~~~d~~g~~~~~~~~~~~~~~~~~~~~~~l~v~t~~~~l~~~d~~-g~~~~~~~~ 134 (330)
T 3hxj_A 58 GEIIECRPSIGKDGTIYFGSDK--VYAINPDGTEKWRFDTKKAIVSDFTIFEDILYVTSMDGHLYAINTD-GTEKWRFKT 134 (330)
T ss_dssp GGEEEECCEETTTTEECCSSCE--EEEECCCGGGGGGSCC-----CCEEEETTEEEEECTTSEEEEECTT-SCEEEEEEC
T ss_pred CCCcccceEEecCCcEEEecCc--EEEECCCCcEEEEEECCCCcccCceEECCEEEEEecCCEEEEEcCC-CCEEEEEcC
Confidence 3345677788888887776665 88888643 00 00114678888889999999988 777777766
Q ss_pred cCCcEEEEEEcCCCEEEEEECCCeEEEEeCCCcEEEEEeCCCCCEEEEEEeCCCeEEEEECCCeEEEEECCCCeEEEEEe
Q psy7057 78 HEMAVWGVIQLANGIIVTGCADKTIKLHSEEGEFLKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMY 157 (557)
Q Consensus 78 h~~~V~~l~~~~~~~l~sgs~dg~I~vwd~~~~~~~~l~~h~~~V~~l~~~~~~~lvs~s~Dg~I~vwd~~~~~~~~~~~ 157 (557)
+...+.++...+++.++.++.++.|..+|..++.+..+......+.++...+++.+..++ +.|..+| .+++.+..+.
T Consensus 135 ~~~~~~~~~~~~~g~l~vgt~~~~l~~~d~~g~~~~~~~~~~~~~~~~~~d~~g~l~v~t--~~l~~~d-~~g~~~~~~~ 211 (330)
T 3hxj_A 135 KKAIYATPIVSEDGTIYVGSNDNYLYAINPDGTEKWRFKTNDAITSAASIGKDGTIYFGS--DKVYAIN-PDGTEKWNFY 211 (330)
T ss_dssp SSCCCSCCEECTTSCEEEECTTSEEEEECTTSCEEEEEECSSCCCSCCEECTTCCEEEES--SSEEEEC-TTSCEEEEEC
T ss_pred CCceeeeeEEcCCCEEEEEcCCCEEEEECCCCCEeEEEecCCCceeeeEEcCCCEEEEEe--CEEEEEC-CCCcEEEEEc
Confidence 666667777777888888889999999997777777776666667778887788877777 8899999 7888877777
Q ss_pred CCCCcEEEEEEcCC-EEEEEeCCCeEEEEECCCC--ceEeeCCccEEEEEEcCCCcEEEEEcCCcEEEEecCCCCcchhH
Q psy7057 158 GHPNFIYSVAAHGD-LITSGGEDQCVCVYQNKAQ--NSFMIPAMSVWAVAILPNSDIVTGSSDGIVRVFSANPDRQAEDA 234 (557)
Q Consensus 158 ~h~~~V~~l~~~~~-~l~s~s~Dg~I~iwd~~~~--~~~~~~~~~v~~v~~~p~g~l~sg~~Dg~I~iwd~~~~~~~~~~ 234 (557)
.....+.++..+++ .|..++.++.|..++.... ..+......+.++.+.+++.+..++.+|.|..++. +++.....
T Consensus 212 ~~~~~~~~~~~~~~g~l~v~t~~~gl~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~v~t~~ggl~~~d~-~g~~~~~~ 290 (330)
T 3hxj_A 212 AGYWTVTRPAISEDGTIYVTSLDGHLYAINPDGTEKWRFKTGKRIESSPVIGNTDTIYFGSYDGHLYAINP-DGTEKWNF 290 (330)
T ss_dssp CSSCCCSCCEECTTSCEEEEETTTEEEEECTTSCEEEEEECSSCCCSCCEECTTSCEEEECTTCEEEEECT-TSCEEEEE
T ss_pred cCCcceeceEECCCCeEEEEcCCCeEEEECCCCCEeEEeeCCCCccccceEcCCCeEEEecCCCCEEEECC-CCcEEEEE
Confidence 66667778887543 6777888888888874333 22233333344566666778999999999999985 33332111
Q ss_pred HHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecCC
Q psy7057 235 VQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANP 272 (557)
Q Consensus 235 ~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~ 272 (557)
.. ....+..+..... ..+..++.+|.+++.....
T Consensus 291 ~~--~~~~~~~~~~d~~--g~l~~gt~~G~~~~~~~~~ 324 (330)
T 3hxj_A 291 ET--GSWIIATPVIDEN--GTIYFGTRNGKFYALFNLE 324 (330)
T ss_dssp EC--SSCCCSCCEECTT--CCEEEECTTSCEEEEEC--
T ss_pred Ec--CCccccceEEcCC--CEEEEEcCCCeEEEEeccc
Confidence 11 1111222222122 2356788999999887554
No 210
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.97 E-value=1.8e-07 Score=92.57 Aligned_cols=224 Identities=9% Similarity=0.026 Sum_probs=143.2
Q ss_pred CCCCCCEEEE-------EECCCeEEEEECCCCeEEEEEc----ccCCcEEEEEEcCC-CEEEEEECCCeEEEEeCCCcEE
Q psy7057 45 PGAKVNTLLS-------ASWDMTAKLWCLESQQCKLTIR----QHEMAVWGVIQLAN-GIIVTGCADKTIKLHSEEGEFL 112 (557)
Q Consensus 45 ~~~~~~~l~s-------gs~Dg~i~iwd~~~~~~~~~l~----~h~~~V~~l~~~~~-~~l~sgs~dg~I~vwd~~~~~~ 112 (557)
+++++..+++ +..++.|.+|+..+++...... ++...+.++++.++ +.+..++....|.+||..++..
T Consensus 25 ~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~~~l~~~d~~g~~~ 104 (314)
T 1pjx_A 25 FDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMRLGLLVVQTDGTFE 104 (314)
T ss_dssp ECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETTTEEEEEETTSCEE
T ss_pred ECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECCCCEEEEeCCCCEE
Confidence 3446777777 5778999999988877543222 24567899999999 8766666666899999765543
Q ss_pred EE-EeC----CCCCEEEEEEeCCCeEEEEE-CC---------------CeEEEEECCCCeEEEEEeCCCCcEEEEEEc--
Q psy7057 113 KT-LTG----HTDCVRGLAVLNDTDFVSCS-ND---------------ASIRVWDSTTGKCVHTMYGHPNFIYSVAAH-- 169 (557)
Q Consensus 113 ~~-l~~----h~~~V~~l~~~~~~~lvs~s-~D---------------g~I~vwd~~~~~~~~~~~~h~~~V~~l~~~-- 169 (557)
.. ... ....+.++++.+++.++.++ .+ +.|..||.. ++..... .+......++++
T Consensus 105 ~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~-~~~~~~~~i~~~~~ 182 (314)
T 1pjx_A 105 EIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVD-TAFQFPNGIAVRHM 182 (314)
T ss_dssp ECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEE-EEESSEEEEEEEEC
T ss_pred EEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEec-cCCCCcceEEEecc
Confidence 32 221 12358899999998866444 33 567777765 5544332 233345666665
Q ss_pred --CC--EEE-EEeCCCeEEEEECC-CCc-----eEee---CC-ccEEEEEEcCCCcEE-EEEcCCcEEEEecCCCCcchh
Q psy7057 170 --GD--LIT-SGGEDQCVCVYQNK-AQN-----SFMI---PA-MSVWAVAILPNSDIV-TGSSDGIVRVFSANPDRQAED 233 (557)
Q Consensus 170 --~~--~l~-s~s~Dg~I~iwd~~-~~~-----~~~~---~~-~~v~~v~~~p~g~l~-sg~~Dg~I~iwd~~~~~~~~~ 233 (557)
++ .|+ +...++.|.+|+.. ... .+.. +. ..+..+++.++|.+. +...++.|.+|+..+++....
T Consensus 183 ~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~ 262 (314)
T 1pjx_A 183 NDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMR 262 (314)
T ss_dssp TTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEE
T ss_pred cCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCCCcEeEE
Confidence 43 454 44567899999854 221 2222 11 457889999999954 445788999999875443321
Q ss_pred HHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecCC
Q psy7057 234 AVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANP 272 (557)
Q Consensus 234 ~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~ 272 (557)
. ......+..+.+.+......++...++.|..|++..
T Consensus 263 ~--~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 263 I--RCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp E--ECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred E--eCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 1 112245666666555544556667778999998764
No 211
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.96 E-value=6.2e-08 Score=108.00 Aligned_cols=219 Identities=13% Similarity=0.110 Sum_probs=144.7
Q ss_pred cCcccEEEEEEcCCCc-EE-EEEC----CCcEEEEcCCC---------------CCCCCCCCEEEEEECCCe--------
Q psy7057 10 GHSMDVRSLSVTPDGC-IL-SASR----DKSAKLWKPND---------------LSPGAKVNTLLSASWDMT-------- 60 (557)
Q Consensus 10 gH~~~V~~l~~spdg~-l~-sgs~----Dg~V~iWd~~~---------------~~~~~~~~~l~sgs~Dg~-------- 60 (557)
+|...+..++|||||+ |+ +.+. ..+|++||+.+ ++|+ +++.|+.++.+..
T Consensus 126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~ 204 (693)
T 3iuj_A 126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKDVKFSGISWL-GNEGFFYSSYDKPDGSELSAR 204 (693)
T ss_dssp TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEEEESCCCEEE-TTTEEEEEESSCCC-------
T ss_pred CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCCceeccEEEe-CCCEEEEEEecCccccccccc
Confidence 4666788999999998 55 3333 35799999876 5677 8899999888744
Q ss_pred -----EEEEECCCCe----EEEEEcc-cCCcEEEEEEcCCC-E-EEEEECC---CeEEEEeCCCc--EEEEEeCCCCCEE
Q psy7057 61 -----AKLWCLESQQ----CKLTIRQ-HEMAVWGVIQLANG-I-IVTGCAD---KTIKLHSEEGE--FLKTLTGHTDCVR 123 (557)
Q Consensus 61 -----i~iwd~~~~~----~~~~l~~-h~~~V~~l~~~~~~-~-l~sgs~d---g~I~vwd~~~~--~~~~l~~h~~~V~ 123 (557)
|++|++.+.. ++..... |...+.++.++|++ . +++.+.+ ..|.++|.... ....+..+.....
T Consensus 205 ~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~ 284 (693)
T 3iuj_A 205 TDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDADV 284 (693)
T ss_dssp CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSCE
T ss_pred CCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCceE
Confidence 9999988764 3333344 55567889999999 3 4444432 57899995433 4566666776666
Q ss_pred EEEEeCCCeEE-EEECC---CeEEEEECCCCeE--EEEEeCCCCcEEEEEEcCCEEEEEe-CCC--eEEEEECCCC--ce
Q psy7057 124 GLAVLNDTDFV-SCSND---ASIRVWDSTTGKC--VHTMYGHPNFIYSVAAHGDLITSGG-EDQ--CVCVYQNKAQ--NS 192 (557)
Q Consensus 124 ~l~~~~~~~lv-s~s~D---g~I~vwd~~~~~~--~~~~~~h~~~V~~l~~~~~~l~s~s-~Dg--~I~iwd~~~~--~~ 192 (557)
....++.+.|+ ++..+ +.|..+|+.++.+ ...+..|...+..++.+++.|+... .++ .|++|++... ..
T Consensus 285 ~~~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~s~~g~~lv~~~~~~g~~~l~~~d~~g~~~~~ 364 (693)
T 3iuj_A 285 SLVDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVLTVHSGSGYLFAEYMVDATARVEQFDYEGKRVRE 364 (693)
T ss_dssp EEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEETTEEEEEEEETTEEEEEEECTTSCEEEE
T ss_pred EEEeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEEEEEEECCEEEEEEEECCeeEEEEEECCCCeeEE
Confidence 65333345555 44333 6799999987654 2455556554446666888766555 444 6888887644 33
Q ss_pred EeeC-CccEEEEEEcCCCc-EEEEEcC----CcEEEEecCCCC
Q psy7057 193 FMIP-AMSVWAVAILPNSD-IVTGSSD----GIVRVFSANPDR 229 (557)
Q Consensus 193 ~~~~-~~~v~~v~~~p~g~-l~sg~~D----g~I~iwd~~~~~ 229 (557)
+..+ ...+..+.+++++. ++....+ ++|+.||+.+++
T Consensus 365 l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~ 407 (693)
T 3iuj_A 365 VALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGA 407 (693)
T ss_dssp ECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCC
T ss_pred eecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCe
Confidence 3332 24567777888877 5544443 789999987654
No 212
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.96 E-value=5.8e-07 Score=87.94 Aligned_cols=213 Identities=8% Similarity=0.012 Sum_probs=145.7
Q ss_pred cCcccEEEEEEcCCCcEEEEE-CCCcEEEEcCCC----------------CCCCCCCCEEEEEECCCeEEEEECCCCeEE
Q psy7057 10 GHSMDVRSLSVTPDGCILSAS-RDKSAKLWKPND----------------LSPGAKVNTLLSASWDMTAKLWCLESQQCK 72 (557)
Q Consensus 10 gH~~~V~~l~~spdg~l~sgs-~Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~ 72 (557)
.+...+.++++.++|.++.+. .++.|..||... +..++++..+++...++.|..++.. ++..
T Consensus 59 ~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~ 137 (300)
T 2qc5_A 59 TPDAKVMCLIVSSLGDIWFTENGANKIGKLSKKGGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIY 137 (300)
T ss_dssp STTCCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEE
T ss_pred CCCCcceeEEECCCCCEEEEecCCCeEEEECCCCCeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEE
Confidence 344678999999999966554 478898887654 3344567777776668899999987 5544
Q ss_pred E-EEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeCCCcEEEE-EeCCCCCEEEEEEeCCCeEEEEE-CCCeEEEEECC
Q psy7057 73 L-TIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSEEGEFLKT-LTGHTDCVRGLAVLNDTDFVSCS-NDASIRVWDST 148 (557)
Q Consensus 73 ~-~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~~~~~~~-l~~h~~~V~~l~~~~~~~lvs~s-~Dg~I~vwd~~ 148 (557)
. .+......+.++++.+++ ++++...++.|..++.++..... +..+...+.++++.+++.+..+. ..+.|.+||.
T Consensus 138 ~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~- 216 (300)
T 2qc5_A 138 EYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITNTGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT- 216 (300)
T ss_dssp EEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECTTCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-
T ss_pred EccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECCCCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-
Confidence 2 233345678999999988 45555557889999986665432 22345678999999988866554 4668999997
Q ss_pred CCeEEEE-EeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC-ceEee--CCccEEEEEEcCCCcEEEEEcCCcEEE
Q psy7057 149 TGKCVHT-MYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ-NSFMI--PAMSVWAVAILPNSDIVTGSSDGIVRV 222 (557)
Q Consensus 149 ~~~~~~~-~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~-~~~~~--~~~~v~~v~~~p~g~l~sg~~Dg~I~i 222 (557)
+++.... +..+...+.++++ ++.++++...++.|..|+.... ..+.. ....+.++++.++|.+..++.. .|..
T Consensus 217 ~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~-~i~~ 295 (300)
T 2qc5_A 217 TGEISEYDIPTPNARPHAITAGKNSEIWFTEWGANQIGRITNDNTIQEYQLQTENAEPHGITFGKDGSVWFALKC-KIGK 295 (300)
T ss_dssp TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTTSCEEEEECCSTTCCCCCEEECTTSCEEEECSS-EEEE
T ss_pred CCcEEEEECCCCCCCceEEEECCCCCEEEeccCCCeEEEECCCCcEEEEECCccCCccceeEeCCCCCEEEEccC-ceEE
Confidence 5554433 2334567888888 4565666556789999997433 33322 2346788999999997766664 6666
Q ss_pred Eec
Q psy7057 223 FSA 225 (557)
Q Consensus 223 wd~ 225 (557)
++.
T Consensus 296 ~~p 298 (300)
T 2qc5_A 296 LNL 298 (300)
T ss_dssp EEE
T ss_pred eCC
Confidence 654
No 213
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.94 E-value=1.3e-07 Score=98.37 Aligned_cols=225 Identities=8% Similarity=-0.036 Sum_probs=141.8
Q ss_pred CCCCCCCCEEEEEECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCC--eEEEEeCCC-cEEEEE---
Q psy7057 43 LSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADK--TIKLHSEEG-EFLKTL--- 115 (557)
Q Consensus 43 ~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg--~I~vwd~~~-~~~~~l--- 115 (557)
++++++++++++...++.|++||+.++......... .... +++++++ .|+++..++ .|.+++..+ .....+
T Consensus 136 la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~-~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~ 213 (409)
T 3hrp_A 136 IAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGF-KGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQL 213 (409)
T ss_dssp EEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETC-CBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEEC
T ss_pred EEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccC-CCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeEEeeec
Confidence 566677877777777899999999887766555443 3333 8999988 777777765 788888433 222333
Q ss_pred eC-CCCCEEEEEEeC-CCeEEEEECCCeEEEEECCCCeEEEE----EeCCCCcE-E-EEEEc---CCEEEEEeCCCeEEE
Q psy7057 116 TG-HTDCVRGLAVLN-DTDFVSCSNDASIRVWDSTTGKCVHT----MYGHPNFI-Y-SVAAH---GDLITSGGEDQCVCV 184 (557)
Q Consensus 116 ~~-h~~~V~~l~~~~-~~~lvs~s~Dg~I~vwd~~~~~~~~~----~~~h~~~V-~-~l~~~---~~~l~s~s~Dg~I~i 184 (557)
.. ....+.+++++| ++.|+.+..++.|+.||..++..... ..++...- . .++++ +.++++-...+.|+.
T Consensus 214 ~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~ 293 (409)
T 3hrp_A 214 GSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYK 293 (409)
T ss_dssp CTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEE
T ss_pred cchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEE
Confidence 12 456788999999 67777777889999999887764322 12222222 2 77873 335556667889999
Q ss_pred EECCCC-ceEeeCC---------------ccEEEEEEcCCCcE-EEEE-cCCcEEEEecCCCCcchhHHH---hc-----
Q psy7057 185 YQNKAQ-NSFMIPA---------------MSVWAVAILPNSDI-VTGS-SDGIVRVFSANPDRQAEDAVQ---AQ----- 238 (557)
Q Consensus 185 wd~~~~-~~~~~~~---------------~~v~~v~~~p~g~l-~sg~-~Dg~I~iwd~~~~~~~~~~~~---~~----- 238 (557)
|+.... ..+.+.. .....+++.|+|.| ++-. .++.|+.|+...+........ ..
T Consensus 294 ~~~~g~~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v~~~~g~~~~~g~~~g~ 373 (409)
T 3hrp_A 294 ITPDGECEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYVSTVAGQVDVASQIDGT 373 (409)
T ss_dssp ECTTCCEEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEEEEEEECTTCBSCCCBS
T ss_pred EecCCCEEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEEEEEeCCCCCCCcCCCC
Confidence 986543 3333322 34789999999994 4555 688999999655543211110 00
Q ss_pred ----ccceeEEEeccCCCceeEEEEeCCCcEEEEec
Q psy7057 239 ----YAEEVKKLKSANEQEIGGVKVSDDGIVRVFSA 270 (557)
Q Consensus 239 ----~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~ 270 (557)
.......++..+. ....++-..++.||.+++
T Consensus 374 ~~~~~~~~P~giavd~~-g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 374 PLEATFNYPYDICYDGE-GGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp TTTCCBSSEEEEEECSS-SEEEEEESTTCEEEEEEE
T ss_pred hhceEeCCceEEEEcCC-CCEEEEECCCCeEEEEEe
Confidence 0122344444444 344555566666666654
No 214
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=98.93 E-value=1.8e-08 Score=103.53 Aligned_cols=127 Identities=16% Similarity=0.103 Sum_probs=97.5
Q ss_pred cCCcEEEEEEcCCCEEEEEECCCeEEEEeC-CCcEEEEEeCCCCCEEEEEEeCCCeEEEEECCCeEEEEECCCCeEEEEE
Q psy7057 78 HEMAVWGVIQLANGIIVTGCADKTIKLHSE-EGEFLKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTM 156 (557)
Q Consensus 78 h~~~V~~l~~~~~~~l~sgs~dg~I~vwd~-~~~~~~~l~~h~~~V~~l~~~~~~~lvs~s~Dg~I~vwd~~~~~~~~~~ 156 (557)
+.. |..++| .+..|+++ .++.|++||. +.........|...+.++.+.+.. +++++.||.|.+||+.++....
T Consensus 87 lp~-V~~l~f-d~~~L~v~-~~~~l~v~dv~sl~~~~~~~~~~~~v~~i~~~~p~-~av~~~dG~L~v~dl~~~~~~~-- 160 (388)
T 1xip_A 87 IPD-VIFVCF-HGDQVLVS-TRNALYSLDLEELSEFRTVTSFEKPVFQLKNVNNT-LVILNSVNDLSALDLRTKSTKQ-- 160 (388)
T ss_dssp CTT-EEEEEE-ETTEEEEE-ESSEEEEEESSSTTCEEEEEECSSCEEEEEECSSE-EEEEETTSEEEEEETTTCCEEE--
T ss_pred CCC-eeEEEE-CCCEEEEE-cCCcEEEEEchhhhccCccceeecceeeEEecCCC-EEEEECCCCEEEEEccCCcccc--
Confidence 556 999999 33477777 8899999993 333344556677889888877553 8899999999999999887653
Q ss_pred eCCCCcEEEEEEcCCEEEEEeCCCeEEEEECCCCc-----eE------e---eCCccEEEEEEcCCCcEE
Q psy7057 157 YGHPNFIYSVAAHGDLITSGGEDQCVCVYQNKAQN-----SF------M---IPAMSVWAVAILPNSDIV 212 (557)
Q Consensus 157 ~~h~~~V~~l~~~~~~l~s~s~Dg~I~iwd~~~~~-----~~------~---~~~~~v~~v~~~p~g~l~ 212 (557)
+...|+|++|+++-++.|..||++++|+..... .+ . .+...|.+|+|.+++.++
T Consensus 161 --~~~~Vs~v~WSpkG~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~fl 228 (388)
T 1xip_A 161 --LAQNVTSFDVTNSQLAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFL 228 (388)
T ss_dssp --EEESEEEEEECSSEEEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEE
T ss_pred --ccCCceEEEEcCCceEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEE
Confidence 456899999977668999999999999855432 23 1 256789999999999833
No 215
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.93 E-value=3.9e-07 Score=91.66 Aligned_cols=198 Identities=11% Similarity=0.041 Sum_probs=129.0
Q ss_pred cEEEEEEcCCC-c-EEEEECCCcEEEEcCCC--------------CCCCCCCCEEEEEECCCeEEEEECCCCeEEEEEcc
Q psy7057 14 DVRSLSVTPDG-C-ILSASRDKSAKLWKPND--------------LSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQ 77 (557)
Q Consensus 14 ~V~~l~~spdg-~-l~sgs~Dg~V~iWd~~~--------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~ 77 (557)
-..+.+|+|++ . +++...++.|..|+..+ +.+.+++.++++ +. ..|.+||..+++.......
T Consensus 50 ~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~~~~~v~~i~~~~dg~l~v~-~~-~gl~~~d~~~g~~~~~~~~ 127 (326)
T 2ghs_A 50 LGEGPTFDPASGTAWWFNILERELHELHLASGRKTVHALPFMGSALAKISDSKQLIA-SD-DGLFLRDTATGVLTLHAEL 127 (326)
T ss_dssp BEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEEEEECSSCEEEEEEEETTEEEEE-ET-TEEEEEETTTCCEEEEECS
T ss_pred CCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEEEEECCCcceEEEEeCCCeEEEE-EC-CCEEEEECCCCcEEEEeeC
Confidence 45678999975 4 55666788999998765 334455665554 44 4599999988775433221
Q ss_pred ----cCCcEEEEEEcCCCEEEEEEC-------CCeEEEEeCCCcEEEEEeCCCCCEEEEEEeCCCe-E-EEEECCCeEEE
Q psy7057 78 ----HEMAVWGVIQLANGIIVTGCA-------DKTIKLHSEEGEFLKTLTGHTDCVRGLAVLNDTD-F-VSCSNDASIRV 144 (557)
Q Consensus 78 ----h~~~V~~l~~~~~~~l~sgs~-------dg~I~vwd~~~~~~~~l~~h~~~V~~l~~~~~~~-l-vs~s~Dg~I~v 144 (557)
....+.++++.++|.++.++. .+.|..++ +++.. .+..+......++|+|++. + ++.+.++.|.+
T Consensus 128 ~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~-~g~~~-~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~ 205 (326)
T 2ghs_A 128 ESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA-KGKVT-KLFADISIPNSICFSPDGTTGYFVDTKVNRLMR 205 (326)
T ss_dssp STTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE-TTEEE-EEEEEESSEEEEEECTTSCEEEEEETTTCEEEE
T ss_pred CCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe-CCcEE-EeeCCCcccCCeEEcCCCCEEEEEECCCCEEEE
Confidence 124688999999994444432 24566666 55433 3333334578999999986 4 35556789999
Q ss_pred EECC--CC-e-----EEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC--ceEeeCCccEEEEEEc-CCCc-
Q psy7057 145 WDST--TG-K-----CVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ--NSFMIPAMSVWAVAIL-PNSD- 210 (557)
Q Consensus 145 wd~~--~~-~-----~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~--~~~~~~~~~v~~v~~~-p~g~- 210 (557)
||+. ++ + ....+.........+++ ++.++++...++.|.+|+.... ..+..+...+.+++|. |++.
T Consensus 206 ~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~~g~~~~~i~~~~~~~~~~af~g~d~~~ 285 (326)
T 2ghs_A 206 VPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDTDGNHIARYEVPGKQTTCPAFIGPDASR 285 (326)
T ss_dssp EEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECTTCCEEEEEECSCSBEEEEEEESTTSCE
T ss_pred EEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECCCCCEEEEEECCCCCcEEEEEecCCCCE
Confidence 9975 55 3 22233334456677888 5666666667789999997433 4555566679999998 7876
Q ss_pred EEEEE
Q psy7057 211 IVTGS 215 (557)
Q Consensus 211 l~sg~ 215 (557)
|++++
T Consensus 286 L~vt~ 290 (326)
T 2ghs_A 286 LLVTS 290 (326)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 54444
No 216
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.91 E-value=3.3e-07 Score=93.68 Aligned_cols=240 Identities=13% Similarity=0.098 Sum_probs=155.8
Q ss_pred CCCcEEEEECCCcEEEEcCCC--------------CCCCCCCCEEEEEECCCeEEEEECCCCeEEEEEcccCCcE-----
Q psy7057 22 PDGCILSASRDKSAKLWKPND--------------LSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAV----- 82 (557)
Q Consensus 22 pdg~l~sgs~Dg~V~iWd~~~--------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V----- 82 (557)
.++.++.++.++.|..+|..+ ..+...+..++.++.++.+..+|..+++.+..........
T Consensus 102 ~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~p~~~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~ 181 (376)
T 3q7m_A 102 SGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGE 181 (376)
T ss_dssp ETTEEEEEETTSEEEEEETTTCCEEEEEECSSCCCSCCEEETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCC
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEEeCCCceEcCCEEECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCC
Confidence 456788899999999999875 1111235678889999999999999999887776432211
Q ss_pred EEEEEcCCCEEEEEECCCeEEEEe-CCCcEEEEEeCCCCC----------EEEEEEeCCCeEEEEECCCeEEEEECCCCe
Q psy7057 83 WGVIQLANGIIVTGCADKTIKLHS-EEGEFLKTLTGHTDC----------VRGLAVLNDTDFVSCSNDASIRVWDSTTGK 151 (557)
Q Consensus 83 ~~l~~~~~~~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~----------V~~l~~~~~~~lvs~s~Dg~I~vwd~~~~~ 151 (557)
..... .++.++.++.++.+..+| .+++.+......... +.+.....++.++.++.++.+..+|..+++
T Consensus 182 ~~~~~-~~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~ 260 (376)
T 3q7m_A 182 SAPTT-AFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQ 260 (376)
T ss_dssp CCCEE-ETTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCC
T ss_pred CCcEE-ECCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCc
Confidence 11111 256788889999999999 577777665432110 111111124677888889999999999999
Q ss_pred EEEEEeCCCCcEEEEEEcCCEEEEEeCCCeEEEEECCCCceEe-eC---CccEEEEEEcCCCcEEEEEcCCcEEEEecCC
Q psy7057 152 CVHTMYGHPNFIYSVAAHGDLITSGGEDQCVCVYQNKAQNSFM-IP---AMSVWAVAILPNSDIVTGSSDGIVRVFSANP 227 (557)
Q Consensus 152 ~~~~~~~h~~~V~~l~~~~~~l~s~s~Dg~I~iwd~~~~~~~~-~~---~~~v~~v~~~p~g~l~sg~~Dg~I~iwd~~~ 227 (557)
.+..... .....+..++..++.++.++.|..+|..+.+.+- .. ...+..... .++.+++++.+|.|+++|..+
T Consensus 261 ~~w~~~~--~~~~~~~~~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~-~~~~l~v~~~~g~l~~~d~~t 337 (376)
T 3q7m_A 261 IMWKREL--GSVNDFIVDGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVL-YNGNLVVGDSEGYLHWINVED 337 (376)
T ss_dssp EEEEECC--CCEEEEEEETTEEEEEETTCCEEEEETTTCCEEEEECTTTTSCCCCCEE-ETTEEEEECTTSEEEEEETTT
T ss_pred EEeeccC--CCCCCceEECCEEEEEcCCCeEEEEECCCCcEEEeecccCCCcccCCEE-ECCEEEEEeCCCeEEEEECCC
Confidence 8876652 3355666678889999999999999987663322 11 112222222 245688999999999999988
Q ss_pred CCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEe
Q psy7057 228 DRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFS 269 (557)
Q Consensus 228 ~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~ 269 (557)
++........ ...+...... ....++.++.||.|..|+
T Consensus 338 G~~~~~~~~~--~~~~~~~~~~--~~~~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 338 GRFVAQQKVD--SSGFQTEPVA--ADGKLLIQAKDGTVYSIT 375 (376)
T ss_dssp CCEEEEEECC--TTCBCSCCEE--ETTEEEEEBTTSCEEEEE
T ss_pred CcEEEEEecC--CCcceeCCEE--ECCEEEEEeCCCEEEEEe
Confidence 7654222110 0111111111 122467788999999886
No 217
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=98.88 E-value=1.2e-07 Score=106.51 Aligned_cols=228 Identities=13% Similarity=0.056 Sum_probs=140.5
Q ss_pred CCCCCCCCEEEEEECC-----CeEEEEECCCCeEEEEEcccCCcEEEEEEcCCCEEEEEECCCe--------------EE
Q psy7057 43 LSPGAKVNTLLSASWD-----MTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKT--------------IK 103 (557)
Q Consensus 43 ~~~~~~~~~l~sgs~D-----g~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~~l~sgs~dg~--------------I~ 103 (557)
++++|++++|+.++.+ .+|++||+.+++.+... .+...+..++|+|+..|+.++.++. |+
T Consensus 168 ~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~-~~~~~~~~~~wspD~~l~~~~~~~~~~~~~~~~~~~~~~v~ 246 (741)
T 1yr2_A 168 WAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADE-LKWVKFSGLAWLGNDALLYSRFAEPKEGQAFQALNYNQTVW 246 (741)
T ss_dssp EEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEE-EEEEESCCCEESTTSEEEEEECCCC--------CCCCCEEE
T ss_pred EEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCcc-CCCceeccEEEECCCEEEEEEecCcccccccccCCCCCEEE
Confidence 5678899999887654 46999999998865431 1222235788999876666666554 88
Q ss_pred EEeCC-Cc--EEEEEe--CCCCCEEEEEEeCCCe-EEEEECC-----CeEEEEECCCC--eEEEEEeCCCCcEEEE-EEc
Q psy7057 104 LHSEE-GE--FLKTLT--GHTDCVRGLAVLNDTD-FVSCSND-----ASIRVWDSTTG--KCVHTMYGHPNFIYSV-AAH 169 (557)
Q Consensus 104 vwd~~-~~--~~~~l~--~h~~~V~~l~~~~~~~-lvs~s~D-----g~I~vwd~~~~--~~~~~~~~h~~~V~~l-~~~ 169 (557)
+|+.. +. ....+. .+...+.++.|+|+|+ ++..+.+ ..|.+||+.++ ++...+..+...+... ..+
T Consensus 247 ~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~d 326 (741)
T 1yr2_A 247 LHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDFVDGV 326 (741)
T ss_dssp EEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEEEEEE
T ss_pred EEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEEEecc
Confidence 88843 22 122232 3444688999999987 5544433 48999998876 3145555554444433 348
Q ss_pred CCEEEEEeCC----CeEEEEECCCC----ceE-eeCCccEEEEEEcCCCc-EEEEEcCCcEEEEecCC-CCcchhHHHhc
Q psy7057 170 GDLITSGGED----QCVCVYQNKAQ----NSF-MIPAMSVWAVAILPNSD-IVTGSSDGIVRVFSANP-DRQAEDAVQAQ 238 (557)
Q Consensus 170 ~~~l~s~s~D----g~I~iwd~~~~----~~~-~~~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~-~~~~~~~~~~~ 238 (557)
++.|+..+.+ +.|.+|++... +.+ ..+...+..+++. ++. +++...|+..+||.++. +........ .
T Consensus 327 g~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~-~ 404 (741)
T 1yr2_A 327 GDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA-GNRLFASYIHDAKSQVLAFDLDGKPAGAVSL-P 404 (741)
T ss_dssp TTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTEEEEEEEETTSCEEEECBC-S
T ss_pred CCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCceeeccC-C
Confidence 8887777754 45999997652 333 3334456677777 444 67888899888886642 222111111 1
Q ss_pred ccceeEEEeccCCCceeEEEEe---CCCcEEEEecCCC
Q psy7057 239 YAEEVKKLKSANEQEIGGVKVS---DDGIVRVFSANPD 273 (557)
Q Consensus 239 ~~~~v~~l~~~~~~~~~~vs~s---~DG~IrvW~~~~~ 273 (557)
....+..+...+......++.+ ..++|.+|++.++
T Consensus 405 ~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg 442 (741)
T 1yr2_A 405 GIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATA 442 (741)
T ss_dssp SSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTT
T ss_pred CCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCC
Confidence 1344555655554443444443 3578999998764
No 218
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.86 E-value=4.6e-07 Score=92.66 Aligned_cols=246 Identities=8% Similarity=0.003 Sum_probs=158.8
Q ss_pred CCcEEEEECCCcEEEEcCCC--------CC----------------CCCCCCEEEEEECCCeEEEEECCCCeEEEEEccc
Q psy7057 23 DGCILSASRDKSAKLWKPND--------LS----------------PGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQH 78 (557)
Q Consensus 23 dg~l~sgs~Dg~V~iWd~~~--------~~----------------~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h 78 (557)
++.+++++.++.|..+|..+ +. +...+..++.++.++.|..+|..+++.+......
T Consensus 53 ~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~ 132 (376)
T 3q7m_A 53 DNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSEKAQVYALNTSDGTVAWQTKVA 132 (376)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEECS
T ss_pred CCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcCCCEEEEEECCCCCEEEEEeCC
Confidence 45688888888999998865 11 0112467888999999999999999988777644
Q ss_pred CCcEEEEEEcCCCEEEEEECCCeEEEEe-CCCcEEEEEeCCCCCE-----EEEEEeCCCeEEEEECCCeEEEEECCCCeE
Q psy7057 79 EMAVWGVIQLANGIIVTGCADKTIKLHS-EEGEFLKTLTGHTDCV-----RGLAVLNDTDFVSCSNDASIRVWDSTTGKC 152 (557)
Q Consensus 79 ~~~V~~l~~~~~~~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V-----~~l~~~~~~~lvs~s~Dg~I~vwd~~~~~~ 152 (557)
......... .++.++.++.++.+..+| .+++.+.......... ...... ++.++.++.++.|..+|..+++.
T Consensus 133 ~~~~~~p~~-~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~-~~~v~~g~~~g~l~~~d~~tG~~ 210 (376)
T 3q7m_A 133 GEALSRPVV-SDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA-FGAAVVGGDNGRVSAVLMEQGQM 210 (376)
T ss_dssp SCCCSCCEE-ETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE-TTEEEECCTTTEEEEEETTTCCE
T ss_pred CceEcCCEE-ECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE-CCEEEEEcCCCEEEEEECCCCcE
Confidence 322111122 256888899999999999 5788777765432211 122222 56788888899999999999998
Q ss_pred EEEEeCCCCc----------E-EEEEEcCCEEEEEeCCCeEEEEECCCCceE-eeCCccEEEEEEcCCCcEEEEEcCCcE
Q psy7057 153 VHTMYGHPNF----------I-YSVAAHGDLITSGGEDQCVCVYQNKAQNSF-MIPAMSVWAVAILPNSDIVTGSSDGIV 220 (557)
Q Consensus 153 ~~~~~~h~~~----------V-~~l~~~~~~l~s~s~Dg~I~iwd~~~~~~~-~~~~~~v~~v~~~p~g~l~sg~~Dg~I 220 (557)
+......... + ......+..++.++.++.+..+|..+.+.+ .........+... ++.++.++.++.|
T Consensus 211 ~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~-~~~l~~~~~~g~l 289 (376)
T 3q7m_A 211 IWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELGSVNDFIVD-GNRIYLVDQNDRV 289 (376)
T ss_dssp EEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEEEECCCCEEEEEEE-TTEEEEEETTCCE
T ss_pred EEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEeeccCCCCCCceEE-CCEEEEEcCCCeE
Confidence 8776532110 1 111235677888889999999998766332 2333344444443 4558888899999
Q ss_pred EEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecCCChh
Q psy7057 221 RVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPDRQ 275 (557)
Q Consensus 221 ~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~~~~ 275 (557)
..+|..+++..-....... ........ ....++.++.+|.|.+++..+++.
T Consensus 290 ~~~d~~tG~~~w~~~~~~~-~~~~~~~~---~~~~l~v~~~~g~l~~~d~~tG~~ 340 (376)
T 3q7m_A 290 MALTIDGGVTLWTQSDLLH-RLLTSPVL---YNGNLVVGDSEGYLHWINVEDGRF 340 (376)
T ss_dssp EEEETTTCCEEEEECTTTT-SCCCCCEE---ETTEEEEECTTSEEEEEETTTCCE
T ss_pred EEEECCCCcEEEeecccCC-CcccCCEE---ECCEEEEEeCCCeEEEEECCCCcE
Confidence 9999988765421110000 00111111 122467788899999999877643
No 219
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.82 E-value=5.1e-06 Score=85.24 Aligned_cols=222 Identities=13% Similarity=0.046 Sum_probs=142.3
Q ss_pred cEEEEEeccCcccEEEEEEcCCCc-EEEEE----------CCCcEEEEcCCC-----------------------CCCCC
Q psy7057 2 YKLSTALYGHSMDVRSLSVTPDGC-ILSAS----------RDKSAKLWKPND-----------------------LSPGA 47 (557)
Q Consensus 2 ~kl~~~l~gH~~~V~~l~~spdg~-l~sgs----------~Dg~V~iWd~~~-----------------------~~~~~ 47 (557)
.++..++..-..+ .++++|||+ |+.+. .++.|.+||..+ +.++|
T Consensus 57 ~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~sp 134 (373)
T 2mad_H 57 GSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTP 134 (373)
T ss_pred CeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECC
Confidence 3455556544444 899999998 55553 367899999865 24677
Q ss_pred CCCEEEEEEC--CCeEEEEECCCCeEEEE-EcccCCcEEEEEEcCCC--EEEEEECCCeEEEEeCCCcEEEEEe-----C
Q psy7057 48 KVNTLLSASW--DMTAKLWCLESQQCKLT-IRQHEMAVWGVIQLANG--IIVTGCADKTIKLHSEEGEFLKTLT-----G 117 (557)
Q Consensus 48 ~~~~l~sgs~--Dg~i~iwd~~~~~~~~~-l~~h~~~V~~l~~~~~~--~l~sgs~dg~I~vwd~~~~~~~~l~-----~ 117 (557)
++++|++++. +.+|.++| .+++.+.+ +.. .. |+.+.|.+ .+++.+.||.+.+++.+++...... .
T Consensus 135 DG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~-~~---~~~~~~~~~~~~~~~~~dg~~~~vd~~g~~~~~~~~~~~~~ 209 (373)
T 2mad_H 135 NNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSS-PT---CYHIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGLVGAMLT 209 (373)
T ss_pred CCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCC-Cc---eEEEEeCCCceEEEEcCCCCEEEEECCCcEEEEEecccccc
Confidence 8999998875 47899999 99988877 542 22 24444544 6777888999999988554442221 1
Q ss_pred CCCCE-EEEEEeCC-CeEEEEECCCeEEEEECCCCe--EEEEEeCC----------CCcEEEEEE--cCCEEEEEeC---
Q psy7057 118 HTDCV-RGLAVLND-TDFVSCSNDASIRVWDSTTGK--CVHTMYGH----------PNFIYSVAA--HGDLITSGGE--- 178 (557)
Q Consensus 118 h~~~V-~~l~~~~~-~~lvs~s~Dg~I~vwd~~~~~--~~~~~~~h----------~~~V~~l~~--~~~~l~s~s~--- 178 (557)
...++ ....+.++ +.++..+..+.+.+.|+.+.. .+..+.-. ......+.+ +++.++++..
T Consensus 210 ~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~ 289 (373)
T 2mad_H 210 AAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQS 289 (373)
T ss_pred CCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCC
Confidence 11221 22334444 444544467899999986542 22333211 122233444 6666666543
Q ss_pred -------CCeEEEEECCCCc---eEeeCCccEEEEEEcCCCc--EEEEE-cCCcEEEEecCCCCcc
Q psy7057 179 -------DQCVCVYQNKAQN---SFMIPAMSVWAVAILPNSD--IVTGS-SDGIVRVFSANPDRQA 231 (557)
Q Consensus 179 -------Dg~I~iwd~~~~~---~~~~~~~~v~~v~~~p~g~--l~sg~-~Dg~I~iwd~~~~~~~ 231 (557)
.+.|.++|..+.+ ++. .....++++|+|+|+ ++++. .++.|.++|..+.+..
T Consensus 290 ~~~~~~~~~~V~VID~~t~~vv~~i~-~g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv 354 (373)
T 2mad_H 290 AWKLHAAAKEVTSVTGLVGQTSSQIS-LGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQD 354 (373)
T ss_pred cccccCCCCeEEEEECCCCEEEEEEE-CCCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEE
Confidence 3579999987763 332 233689999999998 55555 4899999999887654
No 220
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.82 E-value=6e-07 Score=91.92 Aligned_cols=226 Identities=15% Similarity=0.097 Sum_probs=147.0
Q ss_pred cEEEEEeccCcccEEEEEEcCCCc-EEEEE----------CCCcEEEEcCCC-----------------------CCCCC
Q psy7057 2 YKLSTALYGHSMDVRSLSVTPDGC-ILSAS----------RDKSAKLWKPND-----------------------LSPGA 47 (557)
Q Consensus 2 ~kl~~~l~gH~~~V~~l~~spdg~-l~sgs----------~Dg~V~iWd~~~-----------------------~~~~~ 47 (557)
+++..++..-..+ .++++|||+ ++.++ .++.|.+||..+ +.+++
T Consensus 69 ~~v~~~I~vG~~P--~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~sp 146 (386)
T 3sjl_D 69 GRVIGMIDGGFLP--NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTP 146 (386)
T ss_dssp TEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECT
T ss_pred CeEEEEEECCCCC--cEEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcC
Confidence 4566666654455 499999998 65554 467899999876 24567
Q ss_pred CCCEEEEEEC--CCeEEEEECCCCeEEEEEcccCCcEEEEEEcCCC--EEEEEECCCeEEEEeCC--CcEEEEEeCCC--
Q psy7057 48 KVNTLLSASW--DMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG--IIVTGCADKTIKLHSEE--GEFLKTLTGHT-- 119 (557)
Q Consensus 48 ~~~~l~sgs~--Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~--~l~sgs~dg~I~vwd~~--~~~~~~l~~h~-- 119 (557)
++++++++.. +++|.++|+.+++.+.++.... . ... .|.+ .+++.+.||.+.+.+.. ++.......+.
T Consensus 147 DGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g--~-~~~-~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~ 222 (386)
T 3sjl_D 147 DGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPD--C-YHI-FPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHP 222 (386)
T ss_dssp TSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS--E-EEE-EEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSC
T ss_pred CCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCC--c-cee-ecCCCceeEEECCCCCEEEEECCCCCeEEEeecceecc
Confidence 8999888874 6899999999999998885322 1 222 3433 67788999998888842 44433222121
Q ss_pred --CCEE-EEEEe-CCCeEEEEECCCeEEEEECCCCe--EEEEEe------------CCCCcEEEEEEcCCEEEEEeC---
Q psy7057 120 --DCVR-GLAVL-NDTDFVSCSNDASIRVWDSTTGK--CVHTMY------------GHPNFIYSVAAHGDLITSGGE--- 178 (557)
Q Consensus 120 --~~V~-~l~~~-~~~~lvs~s~Dg~I~vwd~~~~~--~~~~~~------------~h~~~V~~l~~~~~~l~s~s~--- 178 (557)
..+. ...|. ++++++..+.+|+|.+.|+.+.. .+..+. .......++..+++.++....
T Consensus 223 ~~~~~~~~~~~~~~dG~~~~vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~ 302 (386)
T 3sjl_D 223 EDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRD 302 (386)
T ss_dssp TTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECC
T ss_pred ccccccccceeEcCCCcEEEEeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEecccc
Confidence 2222 13443 67887767778999999987653 333332 111122333335666655432
Q ss_pred -------CCeEEEEECCCCceEee--CCccEEEEEEcCCCc--EEEE-EcCCcEEEEecCCCCcchh
Q psy7057 179 -------DQCVCVYQNKAQNSFMI--PAMSVWAVAILPNSD--IVTG-SSDGIVRVFSANPDRQAED 233 (557)
Q Consensus 179 -------Dg~I~iwd~~~~~~~~~--~~~~v~~v~~~p~g~--l~sg-~~Dg~I~iwd~~~~~~~~~ 233 (557)
...|.+.|+.+.+.+.. ....+++|+++++++ |+++ ..++.|.++|..+.+....
T Consensus 303 ~~~hk~~~~~V~viD~~t~kv~~~i~vg~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~ 369 (386)
T 3sjl_D 303 EWRHKTASRFVVVLDAKTGERLAKFEMGHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRS 369 (386)
T ss_dssp TTCTTSCEEEEEEEETTTCCEEEEEEEEEEECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEE
T ss_pred ccccCCCCCEEEEEECCCCeEEEEEECCCCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEE
Confidence 25799999887733322 224788999999986 5554 4589999999988775533
No 221
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.81 E-value=1.7e-07 Score=93.38 Aligned_cols=201 Identities=13% Similarity=0.030 Sum_probs=147.7
Q ss_pred CCcEEEEECCCcEEEEcCCC---------------CCCCCCCCEEEEEECCCeEEEEECCCCeEEEEEcccCCcEEEEEE
Q psy7057 23 DGCILSASRDKSAKLWKPND---------------LSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQ 87 (557)
Q Consensus 23 dg~l~sgs~Dg~V~iWd~~~---------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~ 87 (557)
++.|+.++.++.|..+|... +...+ ...+..++.++.+..+|.. ++....+......+.++..
T Consensus 107 ~~~l~v~t~~~~l~~~d~~g~~~~~~~~~~~~~~~~~~~~-~g~l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~ 184 (330)
T 3hxj_A 107 EDILYVTSMDGHLYAINTDGTEKWRFKTKKAIYATPIVSE-DGTIYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASI 184 (330)
T ss_dssp TTEEEEECTTSEEEEECTTSCEEEEEECSSCCCSCCEECT-TSCEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEE
T ss_pred CCEEEEEecCCEEEEEcCCCCEEEEEcCCCceeeeeEEcC-CCEEEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEE
Confidence 66788888889999888763 11122 3457778888999999988 7777777666666777777
Q ss_pred cCCCEEEEEECCCeEEEEeCCCcEEEEEeCCCCCEEEEEEeCCCeEEEEECCCeEEEEECCCCeEEEEEeCCCCcEEEEE
Q psy7057 88 LANGIIVTGCADKTIKLHSEEGEFLKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVA 167 (557)
Q Consensus 88 ~~~~~l~sgs~dg~I~vwd~~~~~~~~l~~h~~~V~~l~~~~~~~lvs~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~ 167 (557)
.+++.+..++ +.+..+|.+++.+.........+.++...+++.+..++.++.|..+| .+++.+..+......+.++.
T Consensus 185 d~~g~l~v~t--~~l~~~d~~g~~~~~~~~~~~~~~~~~~~~~g~l~v~t~~~gl~~~~-~~g~~~~~~~~~~~~~~~~~ 261 (330)
T 3hxj_A 185 GKDGTIYFGS--DKVYAINPDGTEKWNFYAGYWTVTRPAISEDGTIYVTSLDGHLYAIN-PDGTEKWRFKTGKRIESSPV 261 (330)
T ss_dssp CTTCCEEEES--SSEEEECTTSCEEEEECCSSCCCSCCEECTTSCEEEEETTTEEEEEC-TTSCEEEEEECSSCCCSCCE
T ss_pred cCCCEEEEEe--CEEEEECCCCcEEEEEccCCcceeceEECCCCeEEEEcCCCeEEEEC-CCCCEeEEeeCCCCccccce
Confidence 7778666666 88899997777777777666778888888888888898888999998 46777766665544444555
Q ss_pred Ec-CCEEEEEeCCCeEEEEECCCC--ceEeeCCccEEEEEEcCCCcEEEEEcCCcEEEEecCCC
Q psy7057 168 AH-GDLITSGGEDQCVCVYQNKAQ--NSFMIPAMSVWAVAILPNSDIVTGSSDGIVRVFSANPD 228 (557)
Q Consensus 168 ~~-~~~l~s~s~Dg~I~iwd~~~~--~~~~~~~~~v~~v~~~p~g~l~sg~~Dg~I~iwd~~~~ 228 (557)
.+ +..|..++.++.|..+|.... ..+......+.++...+++.+..++.+|.+++......
T Consensus 262 ~~~~g~l~v~t~~ggl~~~d~~g~~~~~~~~~~~~~~~~~~d~~g~l~~gt~~G~~~~~~~~~~ 325 (330)
T 3hxj_A 262 IGNTDTIYFGSYDGHLYAINPDGTEKWNFETGSWIIATPVIDENGTIYFGTRNGKFYALFNLEH 325 (330)
T ss_dssp ECTTSCEEEECTTCEEEEECTTSCEEEEEECSSCCCSCCEECTTCCEEEECTTSCEEEEEC---
T ss_pred EcCCCeEEEecCCCCEEEECCCCcEEEEEEcCCccccceEEcCCCEEEEEcCCCeEEEEecccc
Confidence 54 557888889989999995322 23333445567777878888999999999999876543
No 222
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.79 E-value=5.9e-06 Score=84.74 Aligned_cols=248 Identities=12% Similarity=0.030 Sum_probs=154.7
Q ss_pred EEcCCCc-EEEEEC--CC---cEEEEcCCC--------------CCCCCCCCEEEEEE----------CCCeEEEEECCC
Q psy7057 19 SVTPDGC-ILSASR--DK---SAKLWKPND--------------LSPGAKVNTLLSAS----------WDMTAKLWCLES 68 (557)
Q Consensus 19 ~~spdg~-l~sgs~--Dg---~V~iWd~~~--------------~~~~~~~~~l~sgs----------~Dg~i~iwd~~~ 68 (557)
...|+++ ++.+.. .. +|.++|..+ +.+++++++++.+. .++.|.+||+.+
T Consensus 27 ~~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~p~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t 106 (373)
T 2mad_H 27 APGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLPNPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVT 106 (373)
T ss_pred cCCCCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCCCCCCeEECCCCCEEEEEeccccccccCCCCCeEEEEECCC
Confidence 3446776 444432 22 889999876 67788899998886 367899999998
Q ss_pred CeEEEEEccc-------CCcEEEEEEcCCC-EEEEEEC--CCeEEEEeCCC-cEEEE-EeCCCCCEEEEEEeCCC--eEE
Q psy7057 69 QQCKLTIRQH-------EMAVWGVIQLANG-IIVTGCA--DKTIKLHSEEG-EFLKT-LTGHTDCVRGLAVLNDT--DFV 134 (557)
Q Consensus 69 ~~~~~~l~~h-------~~~V~~l~~~~~~-~l~sgs~--dg~I~vwd~~~-~~~~~-l~~h~~~V~~l~~~~~~--~lv 134 (557)
.+.+.++... ......++++|+| .|+.++. ++.|.++| .. +.+.. +. .... +.+.|.+ .++
T Consensus 107 ~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~-~~~~---~~~~~~~~~~~~ 181 (373)
T 2mad_H 107 FLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLS-SPTC---YHIHPGAPSTFY 181 (373)
T ss_pred CcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcC-CCce---EEEEeCCCceEE
Confidence 8877766432 1234578999999 6666653 57899999 54 44444 32 2222 3444553 377
Q ss_pred EEECCCeEEEEECCCCeEEEEEe-----CCCCcE-EEEEE--cCCEEEEEeCCCeEEEEECCCC--c---eEeeC-----
Q psy7057 135 SCSNDASIRVWDSTTGKCVHTMY-----GHPNFI-YSVAA--HGDLITSGGEDQCVCVYQNKAQ--N---SFMIP----- 196 (557)
Q Consensus 135 s~s~Dg~I~vwd~~~~~~~~~~~-----~h~~~V-~~l~~--~~~~l~s~s~Dg~I~iwd~~~~--~---~~~~~----- 196 (557)
+.+.||.+.++|. +++.+.... .....+ ....+ ++..++..+..+.+.+.|+... . .+...
T Consensus 182 ~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~ 260 (373)
T 2mad_H 182 LLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRK 260 (373)
T ss_pred EEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCccc
Confidence 8889999999999 887764322 111121 11222 3444333346788999987533 1 11110
Q ss_pred -----CccEEEEEEcCCCc-EEEEEc----------CCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEe
Q psy7057 197 -----AMSVWAVAILPNSD-IVTGSS----------DGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVS 260 (557)
Q Consensus 197 -----~~~v~~v~~~p~g~-l~sg~~----------Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s 260 (557)
......++++|++. +.++.. .+.|.++|..+.+........ .....+.+.++....++++.
T Consensus 261 ~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g---~~p~~i~~s~Dg~~~l~v~~ 337 (373)
T 2mad_H 261 ADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLG---HDVDAISVAQDGGPDLYALS 337 (373)
T ss_pred ccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECC---CCcCeEEECCCCCeEEEEEc
Confidence 12244478899887 544432 357999999887664333222 23556667777663455555
Q ss_pred -CCCcEEEEecCCChh
Q psy7057 261 -DDGIVRVFSANPDRQ 275 (557)
Q Consensus 261 -~DG~IrvW~~~~~~~ 275 (557)
.++.|.|+|..+.+.
T Consensus 338 ~~~~~V~ViD~~t~~v 353 (373)
T 2mad_H 338 AGTEVLHIYDAGAGDQ 353 (373)
T ss_pred CCCCeEEEEECCCCCE
Confidence 689999999886543
No 223
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.74 E-value=1.3e-09 Score=111.99 Aligned_cols=177 Identities=15% Similarity=0.087 Sum_probs=101.9
Q ss_pred CCCEEEEEECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeC-CCcEEEEEeCCCC-CEE-
Q psy7057 48 KVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSE-EGEFLKTLTGHTD-CVR- 123 (557)
Q Consensus 48 ~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~-~~~~~~~l~~h~~-~V~- 123 (557)
.+..+++++.|+.|+.||..+|+.+.++.. ..+.+..+..++ .+++++.|+.|+.||. +|+.+..+..+.. .+.
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~ 85 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQA 85 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTT
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCcccccc
Confidence 478899999999999999999999888876 344444445566 7777789999999995 6776666543321 110
Q ss_pred EEEEeCCCeEEEEECCCeEEEEECCCCeEEEEEeCCCCcEEEEEEcCCEEEEEeCCCeEEEEECCCCc---eEeeCCccE
Q psy7057 124 GLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAAHGDLITSGGEDQCVCVYQNKAQN---SFMIPAMSV 200 (557)
Q Consensus 124 ~l~~~~~~~lvs~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~l~s~s~Dg~I~iwd~~~~~---~~~~~~~~v 200 (557)
+..+..++.+++++.|+.|+.||..+|+.+.++..+.. + ..+.++..+++++.|+.|+.||.++.+ .+... ..
T Consensus 86 sp~~~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~~-~-~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~--~~ 161 (369)
T 2hz6_A 86 SPCRSSDGILYMGKKQDIWYVIDLLTGEKQQTLSSAFA-D-SLSPSTSLLYLGRTEYTITMYDTKTRELRWNATYF--DY 161 (369)
T ss_dssp CSCC-----CCCCEEEEEEEEECCC------------------------EEEEEEEEEEECCCSSSSSCCCEEEEE--EE
T ss_pred CceEecCCEEEEEeCCCEEEEEECCCCcEEEEecCCCc-c-cccccCCEEEEEecCCEEEEEECCCCCEEEeEecc--cc
Confidence 11111345677888899999999999999887765542 1 222367788899999999999976652 22111 11
Q ss_pred EEEEEcCC----CcEEEEEcCCcEEEEecCCCCc
Q psy7057 201 WAVAILPN----SDIVTGSSDGIVRVFSANPDRQ 230 (557)
Q Consensus 201 ~~v~~~p~----g~l~sg~~Dg~I~iwd~~~~~~ 230 (557)
...++.++ +.+++++.||.|+.||..+++.
T Consensus 162 ~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~ 195 (369)
T 2hz6_A 162 AASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDV 195 (369)
T ss_dssp CCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCE
T ss_pred cCccccCCccccceEEEECCCCEEEEEECCCCcE
Confidence 22333332 4588899999999999987764
No 224
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.69 E-value=1.5e-06 Score=86.00 Aligned_cols=157 Identities=11% Similarity=0.075 Sum_probs=108.7
Q ss_pred CcccEEEEEEcCCCcEEEEECCCcEEEEcCCC--------------------CCCCCCCCEEEEEECC---------CeE
Q psy7057 11 HSMDVRSLSVTPDGCILSASRDKSAKLWKPND--------------------LSPGAKVNTLLSASWD---------MTA 61 (557)
Q Consensus 11 H~~~V~~l~~spdg~l~sgs~Dg~V~iWd~~~--------------------~~~~~~~~~l~sgs~D---------g~i 61 (557)
+...+.+++++++|+|+.+. ++.|.+||..+ +.+++++.++++.... ..-
T Consensus 52 ~~~~~~~i~~~~dG~l~v~~-~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~ 130 (297)
T 3g4e_A 52 MDAPVSSVALRQSGGYVATI-GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQG 130 (297)
T ss_dssp CSSCEEEEEEBTTSSEEEEE-TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCE
T ss_pred CCCceEEEEECCCCCEEEEE-CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCc
Confidence 35679999999999977666 56788888764 3455667766554321 234
Q ss_pred EEEECCC-CeEEEEEcccCCcEEEEEEcCCC--EEEEEECCCeEEEEeC---CCcE-----EEEEeCCCCCEEEEEEeCC
Q psy7057 62 KLWCLES-QQCKLTIRQHEMAVWGVIQLANG--IIVTGCADKTIKLHSE---EGEF-----LKTLTGHTDCVRGLAVLND 130 (557)
Q Consensus 62 ~iwd~~~-~~~~~~l~~h~~~V~~l~~~~~~--~l~sgs~dg~I~vwd~---~~~~-----~~~l~~h~~~V~~l~~~~~ 130 (557)
.||.+.. ++.. .+..+......++|+|++ ++++.+.++.|.+|+. ++.. ...+..+...+..+++.++
T Consensus 131 ~l~~~d~~g~~~-~~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~ 209 (297)
T 3g4e_A 131 ALYSLFPDHHVK-KYFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAE 209 (297)
T ss_dssp EEEEECTTSCEE-EEEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTT
T ss_pred EEEEEECCCCEE-EEeeccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCC
Confidence 5555443 3332 233344567889999988 4466667889999983 3432 1222334456889999999
Q ss_pred CeEE-EEECCCeEEEEECCCCeEEEEEeCCCCcEEEEEEc
Q psy7057 131 TDFV-SCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAAH 169 (557)
Q Consensus 131 ~~lv-s~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~~ 169 (557)
+.+. +....+.|..||..+++.+..+..+...+++++|.
T Consensus 210 G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~~~~t~~~f~ 249 (297)
T 3g4e_A 210 GKLWVACYNGGRVIRLDPVTGKRLQTVKLPVDKTTSCCFG 249 (297)
T ss_dssp SCEEEEEETTTEEEEECTTTCCEEEEEECSSSBEEEEEEE
T ss_pred CCEEEEEcCCCEEEEEcCCCceEEEEEECCCCCceEEEEe
Confidence 8855 55567889999998899999998887889999994
No 225
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.69 E-value=9.2e-07 Score=87.78 Aligned_cols=209 Identities=12% Similarity=0.100 Sum_probs=131.8
Q ss_pred EeccCcccEEEEEEcCCCc--EEEEECCCcEEEEcCCC--------------CCCCCCCCEEEEEECCCeEEEEECCCCe
Q psy7057 7 ALYGHSMDVRSLSVTPDGC--ILSASRDKSAKLWKPND--------------LSPGAKVNTLLSASWDMTAKLWCLESQQ 70 (557)
Q Consensus 7 ~l~gH~~~V~~l~~spdg~--l~sgs~Dg~V~iWd~~~--------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~~ 70 (557)
.|..+.......+|+|+|+ +++...++.|..|+... +.++++++++++...++.|.+|+.. ++
T Consensus 39 ~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~g~~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~ 117 (305)
T 3dr2_A 39 TLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWREDGTVDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQ 117 (305)
T ss_dssp EEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEETTSCEEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SC
T ss_pred EEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeCCCCEEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-CC
Confidence 3444556778899999987 55777789999998743 5566778766655566889999976 55
Q ss_pred EEEEEccc----CCcEEEEEEcCCC-EEEE----EEC-------------CCeEEEEeC-CCcEEEEEeCCCCCEEEEEE
Q psy7057 71 CKLTIRQH----EMAVWGVIQLANG-IIVT----GCA-------------DKTIKLHSE-EGEFLKTLTGHTDCVRGLAV 127 (557)
Q Consensus 71 ~~~~l~~h----~~~V~~l~~~~~~-~l~s----gs~-------------dg~I~vwd~-~~~~~~~l~~h~~~V~~l~~ 127 (557)
........ ...+.++++.++| ++++ |.. .+.|..+|. +++.... . .......++|
T Consensus 118 ~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~-~-~~~~p~gl~~ 195 (305)
T 3dr2_A 118 AHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRM-A-DLDHPNGLAF 195 (305)
T ss_dssp EEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEE-E-EESSEEEEEE
T ss_pred EEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEE-e-cCCCCcceEE
Confidence 33222111 2346679999999 4444 332 245777775 4443332 2 3456788999
Q ss_pred eCCCe-EEEEECC------CeEEEEECCCCeE--EEEEe-CCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC--ceE
Q psy7057 128 LNDTD-FVSCSND------ASIRVWDSTTGKC--VHTMY-GHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ--NSF 193 (557)
Q Consensus 128 ~~~~~-lvs~s~D------g~I~vwd~~~~~~--~~~~~-~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~--~~~ 193 (557)
+|++. ++.+... +.|.+|++..+.. ...+. ........+++ +|+ |.+++.+ .|.+|+.... ..+
T Consensus 196 spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~-lwv~~~~-gv~~~~~~g~~~~~~ 273 (305)
T 3dr2_A 196 SPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGW-LWSSSGT-GVCVFDSDGQLLGHI 273 (305)
T ss_dssp CTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSC-EEECCSS-EEEEECTTSCEEEEE
T ss_pred cCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCC-EEEecCC-cEEEECCCCCEEEEE
Confidence 99986 5555544 7899999875541 11121 12233445666 566 4444444 4999996443 444
Q ss_pred eeCCccEEEEEEcCCCc-EEEEEcCCcEE
Q psy7057 194 MIPAMSVWAVAILPNSD-IVTGSSDGIVR 221 (557)
Q Consensus 194 ~~~~~~v~~v~~~p~g~-l~sg~~Dg~I~ 221 (557)
..+. .+.+++|.|+++ |..++.++..+
T Consensus 274 ~~~~-~~~~~~f~~d~~~L~it~~~~l~~ 301 (305)
T 3dr2_A 274 PTPG-TASNCTFDQAQQRLFITGGPCLWM 301 (305)
T ss_dssp ECSS-CCCEEEECTTSCEEEEEETTEEEE
T ss_pred ECCC-ceeEEEEeCCCCEEEEEcCCeEEE
Confidence 4444 588999998887 66666664333
No 226
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.62 E-value=5.2e-06 Score=84.95 Aligned_cols=250 Identities=13% Similarity=0.060 Sum_probs=160.5
Q ss_pred EEEcCCCc-EEEEEC-----CCcEEEEcCCC--------------CCCCCCCCEEEEEE----------CCCeEEEEECC
Q psy7057 18 LSVTPDGC-ILSASR-----DKSAKLWKPND--------------LSPGAKVNTLLSAS----------WDMTAKLWCLE 67 (557)
Q Consensus 18 l~~spdg~-l~sgs~-----Dg~V~iWd~~~--------------~~~~~~~~~l~sgs----------~Dg~i~iwd~~ 67 (557)
....|++. ++.... ++.|.+.|..+ +.++++++++++++ .++.|.+||..
T Consensus 38 ~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~ 117 (386)
T 3sjl_D 38 EAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLPNPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPV 117 (386)
T ss_dssp CCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSCEEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTT
T ss_pred eccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCCcEEECCCCCEEEEEcccccccccCCCCCEEEEEECC
Confidence 34568887 555543 68999999877 56678899887776 36789999999
Q ss_pred CCeEEEEEcccC-------CcEEEEEEcCCC-EEEEEEC--CCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeCC--CeEE
Q psy7057 68 SQQCKLTIRQHE-------MAVWGVIQLANG-IIVTGCA--DKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLND--TDFV 134 (557)
Q Consensus 68 ~~~~~~~l~~h~-------~~V~~l~~~~~~-~l~sgs~--dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~~--~~lv 134 (557)
+.+.+.++.... .....++++|+| .++.+.. ++.|.++| .+++.+.++... .. . .+.|. ..|+
T Consensus 118 t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~-g~--~-~~~P~g~~~~~ 193 (386)
T 3sjl_D 118 TLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVP-DC--Y-HIFPTAPDTFF 193 (386)
T ss_dssp TCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECC-SE--E-EEEEEETTEEE
T ss_pred CCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECC-Cc--c-eeecCCCceeE
Confidence 999888875321 234568999999 6666653 68999999 566667776532 21 1 22233 3477
Q ss_pred EEECCCeEEEEECCC-CeEEEEEeCC----CCcEE-EEEE---cCCEEEEEeCCCeEEEEECCCC-----ceEeeC----
Q psy7057 135 SCSNDASIRVWDSTT-GKCVHTMYGH----PNFIY-SVAA---HGDLITSGGEDQCVCVYQNKAQ-----NSFMIP---- 196 (557)
Q Consensus 135 s~s~Dg~I~vwd~~~-~~~~~~~~~h----~~~V~-~l~~---~~~~l~s~s~Dg~I~iwd~~~~-----~~~~~~---- 196 (557)
+.+.||++.+.++.+ ++...+...+ ...+. ...| +|++++ .+.+|.|++.|.... ..+...
T Consensus 194 ~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~ 272 (386)
T 3sjl_D 194 MHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVW-PTYTGKIHQIDLSSGDAKFLPAVEALTEAE 272 (386)
T ss_dssp EEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEE-EBTTSEEEEEECTTSSCEECCCEESSCHHH
T ss_pred EECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEE-EeCCCEEEEEECCCCcceeecceecccccc
Confidence 889999999999876 5653322211 11221 1244 444444 666899999997543 112100
Q ss_pred ------CccEEEEEEcCCCc-EEEEEc----------CCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeE-EE
Q psy7057 197 ------AMSVWAVAILPNSD-IVTGSS----------DGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGG-VK 258 (557)
Q Consensus 197 ------~~~v~~v~~~p~g~-l~sg~~----------Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~-vs 258 (557)
......+++++++. ++.... .+.|.++|..+.+........ .....+...++....+ ++
T Consensus 273 ~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg---~~~~~lavs~D~~~~ly~t 349 (386)
T 3sjl_D 273 RADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMG---HEIDSINVSQDEKPLLYAL 349 (386)
T ss_dssp HHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE---EEECEEEECSSSSCEEEEE
T ss_pred ccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECC---CCcceEEECCCCCeEEEEE
Confidence 11233477788877 444322 256999999888766443332 2456677777765344 55
Q ss_pred EeCCCcEEEEecCCChh
Q psy7057 259 VSDDGIVRVFSANPDRQ 275 (557)
Q Consensus 259 ~s~DG~IrvW~~~~~~~ 275 (557)
...++.|.|+|..+.+.
T Consensus 350 n~~~~~VsViD~~t~k~ 366 (386)
T 3sjl_D 350 STGDKTLYIHDAESGEE 366 (386)
T ss_dssp ETTTTEEEEEETTTCCE
T ss_pred cCCCCeEEEEECCCCcE
Confidence 56799999999876643
No 227
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.55 E-value=2.8e-06 Score=85.93 Aligned_cols=214 Identities=9% Similarity=0.036 Sum_probs=128.5
Q ss_pred cEEEEEeccCcccEEEEEEcCCCcEE-EEE--CCCcEEEEcCCC----------------------CCCCCCCCEEEEEE
Q psy7057 2 YKLSTALYGHSMDVRSLSVTPDGCIL-SAS--RDKSAKLWKPND----------------------LSPGAKVNTLLSAS 56 (557)
Q Consensus 2 ~kl~~~l~gH~~~V~~l~~spdg~l~-sgs--~Dg~V~iWd~~~----------------------~~~~~~~~~l~sgs 56 (557)
+++++.+. .....|+++|+|+++ +.. .++.++||.+.+ +.+++++.++++-+
T Consensus 9 ~~~v~~~~---~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~ 85 (343)
T 2qe8_A 9 LEVVAELS---LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGLIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDN 85 (343)
T ss_dssp CEEEEEES---SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEEEESCCCCSSCCCCCSCEEEEEECSSSEEEEEEC
T ss_pred eEEEEEcC---CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCeecCCCcccCcccceeEeeEEEEcCCCcEEEEcC
Confidence 34444444 688999999999954 543 234244444311 34455555444433
Q ss_pred C-----CCeEEEEECCCCeEEEEEccc------CCcEEEEEEcCC-C-EEEEEE---CCCeEEEEeC-CCcEEEEEeCCC
Q psy7057 57 W-----DMTAKLWCLESQQCKLTIRQH------EMAVWGVIQLAN-G-IIVTGC---ADKTIKLHSE-EGEFLKTLTGHT 119 (557)
Q Consensus 57 ~-----Dg~i~iwd~~~~~~~~~l~~h------~~~V~~l~~~~~-~-~l~sgs---~dg~I~vwd~-~~~~~~~l~~h~ 119 (557)
. +..|.+||+.+++.+.++... ...+..+++.++ + .+++.+ .++.|.+||. +++..+.+.+|.
T Consensus 86 g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~ 165 (343)
T 2qe8_A 86 GNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYP 165 (343)
T ss_dssp HHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCT
T ss_pred CCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCC
Confidence 3 578999999999877766532 235678999875 5 445555 6789999995 455555554321
Q ss_pred -----------------------------CCEEEEEEeCCCe-EEEEECCC-eEEEEECC---CCe-----EE--EEEeC
Q psy7057 120 -----------------------------DCVRGLAVLNDTD-FVSCSNDA-SIRVWDST---TGK-----CV--HTMYG 158 (557)
Q Consensus 120 -----------------------------~~V~~l~~~~~~~-lvs~s~Dg-~I~vwd~~---~~~-----~~--~~~~~ 158 (557)
..+..|+++|++. ++.+..++ .+..++.. .+. .. ....+
T Consensus 166 ~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g 245 (343)
T 2qe8_A 166 GIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYS 245 (343)
T ss_dssp TTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEE
T ss_pred cccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecc
Confidence 2368899999986 55665554 45444421 110 00 01112
Q ss_pred CCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC--ceEeeC--CccEEEEEEcCCCc-EEEEEcCC
Q psy7057 159 HPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ--NSFMIP--AMSVWAVAILPNSD-IVTGSSDG 218 (557)
Q Consensus 159 h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~--~~~~~~--~~~v~~v~~~p~g~-l~sg~~Dg 218 (557)
+......+++ ++.++++...++.|.+||.... ..+... ...+.++++.+++. +++.+..+
T Consensus 246 ~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g~l~v~~~~~~ 312 (343)
T 2qe8_A 246 EKPICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTDEKLSWTDSFNFGSDGYLYFDCNQLH 312 (343)
T ss_dssp ECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEECGGGSCEEEEEECTTSCEEEEECCGG
T ss_pred cCCCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEECCceecCCeeEECCCCcEEEEeCccc
Confidence 3334445666 6778888888999999998333 333222 23578899988887 44444333
No 228
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.54 E-value=4.2e-06 Score=92.84 Aligned_cols=169 Identities=12% Similarity=0.103 Sum_probs=113.5
Q ss_pred CCcEEEEECCCcEEEEcCCC--------CC-----------------CCCCCCEEEEEECCCeEEEEECCCCeEEEEEcc
Q psy7057 23 DGCILSASRDKSAKLWKPND--------LS-----------------PGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQ 77 (557)
Q Consensus 23 dg~l~sgs~Dg~V~iWd~~~--------~~-----------------~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~ 77 (557)
++.|+.++.++.|.-+|..+ .. +.-.+..|+.++.|+.|..+|..+|+.+..+..
T Consensus 77 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~dg~l~alD~~tG~~~W~~~~ 156 (677)
T 1kb0_A 77 DGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAWDGRLIALDAATGKEVWHQNT 156 (677)
T ss_dssp TTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECTTSEEEEEETTTCCEEEEEET
T ss_pred CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcCCCEEEEEECCCCCEEeeecC
Confidence 45677777788888888765 10 001357899999999999999999999988875
Q ss_pred c-C----CcEEEEEEcCCCEEEEEEC------CCeEEEEe-CCCcEEEEEeCCCCC------------------------
Q psy7057 78 H-E----MAVWGVIQLANGIIVTGCA------DKTIKLHS-EEGEFLKTLTGHTDC------------------------ 121 (557)
Q Consensus 78 h-~----~~V~~l~~~~~~~l~sgs~------dg~I~vwd-~~~~~~~~l~~h~~~------------------------ 121 (557)
+ . ..+.+.-...++.++.++. ++.|+.+| .+|+.+..+......
T Consensus 157 ~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~ 236 (677)
T 1kb0_A 157 FEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWW 236 (677)
T ss_dssp TTTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHH
T ss_pred CcCcCcCcccccCcEEECCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccccCcee
Confidence 4 2 1221111112566666553 78999999 688888776542211
Q ss_pred --------EEEEEEeCC-CeEEEEECCC-------------------eEEEEECCCCeEEEEEeC--CC--------Cc-
Q psy7057 122 --------VRGLAVLND-TDFVSCSNDA-------------------SIRVWDSTTGKCVHTMYG--HP--------NF- 162 (557)
Q Consensus 122 --------V~~l~~~~~-~~lvs~s~Dg-------------------~I~vwd~~~~~~~~~~~~--h~--------~~- 162 (557)
...++++++ +.++.++.++ +|..+|..+|+.+-.++. |. .+
T Consensus 237 ~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~ 316 (677)
T 1kb0_A 237 EAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMI 316 (677)
T ss_dssp HHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCE
T ss_pred EeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcE
Confidence 124677776 4455665553 599999999999888764 21 11
Q ss_pred EEEEEEcC---CEEEEEeCCCeEEEEECCCCc
Q psy7057 163 IYSVAAHG---DLITSGGEDQCVCVYQNKAQN 191 (557)
Q Consensus 163 V~~l~~~~---~~l~s~s~Dg~I~iwd~~~~~ 191 (557)
+..+..+| ..++.++.+|.++++|..+.+
T Consensus 317 l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~ 348 (677)
T 1kb0_A 317 LADIKIAGKPRKVILHAPKNGFFFVLDRTNGK 348 (677)
T ss_dssp EEEEEETTEEEEEEEECCTTSEEEEEETTTCC
T ss_pred EEecccCCcEeeEEEEECCCCEEEEEECCCCC
Confidence 22233366 578999999999999977663
No 229
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.54 E-value=3.8e-06 Score=93.35 Aligned_cols=170 Identities=11% Similarity=0.086 Sum_probs=113.5
Q ss_pred CCcEEEEECCCcEEEEcCCC--------CC-----------------CCCCCCEEEEEECCCeEEEEECCCCeEEEEEcc
Q psy7057 23 DGCILSASRDKSAKLWKPND--------LS-----------------PGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQ 77 (557)
Q Consensus 23 dg~l~sgs~Dg~V~iWd~~~--------~~-----------------~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~ 77 (557)
++.++.++.++.|.-+|..+ .. +.-.+..++.++.|+.|..+|.++|+.+..+..
T Consensus 70 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~dg~l~AlDa~TG~~~W~~~~ 149 (689)
T 1yiq_A 70 DGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVLDGRLEAIDAKTGQRAWSVDT 149 (689)
T ss_dssp TTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred CCEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEccCCEEEEEECCCCCEeeeecC
Confidence 45677888888888888765 00 011356889999999999999999998887754
Q ss_pred c--CCcEEEEEEcC---CCEEEEEE------CCCeEEEEe-CCCcEEEEEeCCC--------------------------
Q psy7057 78 H--EMAVWGVIQLA---NGIIVTGC------ADKTIKLHS-EEGEFLKTLTGHT-------------------------- 119 (557)
Q Consensus 78 h--~~~V~~l~~~~---~~~l~sgs------~dg~I~vwd-~~~~~~~~l~~h~-------------------------- 119 (557)
. ......+...| ++.++.++ .++.|+.|| .+|+.+..+....
T Consensus 150 ~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~ 229 (689)
T 1yiq_A 150 RADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVE 229 (689)
T ss_dssp CSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHH
T ss_pred cCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCceeee
Confidence 2 11111111122 56565554 378999999 6788877765210
Q ss_pred -----CCEEEEEEeCC-CeEEEEECCC-------------------eEEEEECCCCeEEEEEeC--CC-------CcE--
Q psy7057 120 -----DCVRGLAVLND-TDFVSCSNDA-------------------SIRVWDSTTGKCVHTMYG--HP-------NFI-- 163 (557)
Q Consensus 120 -----~~V~~l~~~~~-~~lvs~s~Dg-------------------~I~vwd~~~~~~~~~~~~--h~-------~~V-- 163 (557)
.....+++.|+ +.++.++.++ .|..+|..+|+.+-.++. |. ...
T Consensus 230 ~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l 309 (689)
T 1yiq_A 230 QGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMIL 309 (689)
T ss_dssp HCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEE
T ss_pred cCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEE
Confidence 01124677776 5566777665 399999999999988864 21 111
Q ss_pred EEEEEcCC---EEEEEeCCCeEEEEECCCCce
Q psy7057 164 YSVAAHGD---LITSGGEDQCVCVYQNKAQNS 192 (557)
Q Consensus 164 ~~l~~~~~---~l~s~s~Dg~I~iwd~~~~~~ 192 (557)
..+.+++. .++.++.+|.++++|..+.+.
T Consensus 310 ~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~ 341 (689)
T 1yiq_A 310 AELPIDGKPRKVLMQAPKNGFFYVIDRATGEL 341 (689)
T ss_dssp EEEEETTEEEEEEEECCTTSEEEEEETTTCCE
T ss_pred EeeccCCcEEEEEEEECCCCeEEEEECCCCCE
Confidence 22334554 788999999999999776643
No 230
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.52 E-value=2.9e-06 Score=84.12 Aligned_cols=179 Identities=11% Similarity=-0.002 Sum_probs=116.8
Q ss_pred CCCCCC-EEEEEECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCCCEEEEEE-CCCeEEEEeCCCcEEEEEeCC----
Q psy7057 45 PGAKVN-TLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGC-ADKTIKLHSEEGEFLKTLTGH---- 118 (557)
Q Consensus 45 ~~~~~~-~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~~l~sgs-~dg~I~vwd~~~~~~~~l~~h---- 118 (557)
++++++ ++++...++.|..|+. +++ ...+..+...+.++++.++|.++++. .++.|.+|+.++.........
T Consensus 52 ~~~~g~~l~~~d~~~~~i~~~~~-~g~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~g~~~~~~~~~~~~~ 129 (305)
T 3dr2_A 52 WWEAQRTLVWSDLVGRRVLGWRE-DGT-VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDADGQAHLLVGRYAGKR 129 (305)
T ss_dssp EEGGGTEEEEEETTTTEEEEEET-TSC-EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEECEETTEE
T ss_pred EeCCCCEEEEEECCCCEEEEEeC-CCC-EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCCCCEEEEEeccCCCc
Confidence 344566 5667777899999998 444 34555567789999999999555555 457899999766543222111
Q ss_pred CCCEEEEEEeCCCeEEE-----EEC-------------CCeEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeC
Q psy7057 119 TDCVRGLAVLNDTDFVS-----CSN-------------DASIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGE 178 (557)
Q Consensus 119 ~~~V~~l~~~~~~~lvs-----~s~-------------Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~ 178 (557)
...+.++++.++|.+.. |.. .+.|..+|..+++..... .......+++ +++.|+.+..
T Consensus 130 ~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~~p~gl~~spdg~~lyv~~~ 207 (305)
T 3dr2_A 130 LNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLDHPNGLAFSPDEQTLYVSQT 207 (305)
T ss_dssp CSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EESSEEEEEECTTSSEEEEEEC
T ss_pred cCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cCCCCcceEEcCCCCEEEEEec
Confidence 13467899999988665 322 256888887666644332 3345567788 6676776665
Q ss_pred C------CeEEEEECCCCc-----eEe-eCCccEEEEEEcCCCcEEEEEcCCcEEEEecCCC
Q psy7057 179 D------QCVCVYQNKAQN-----SFM-IPAMSVWAVAILPNSDIVTGSSDGIVRVFSANPD 228 (557)
Q Consensus 179 D------g~I~iwd~~~~~-----~~~-~~~~~v~~v~~~p~g~l~sg~~Dg~I~iwd~~~~ 228 (557)
. +.|++|+..... .+. ........+++.++|.+.+++.++ |.+|+....
T Consensus 208 ~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~~~g-v~~~~~~g~ 268 (305)
T 3dr2_A 208 PEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWSSSGTG-VCVFDSDGQ 268 (305)
T ss_dssp CC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEECCSSE-EEEECTTSC
T ss_pred CCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEEecCCc-EEEECCCCC
Confidence 4 789999865321 111 112334568899999977776555 999987543
No 231
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.48 E-value=4.7e-08 Score=100.32 Aligned_cols=179 Identities=12% Similarity=0.155 Sum_probs=99.1
Q ss_pred CCEEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeCCCe-EEEEECCCeEEEEECCCCeEEEEEeCCCC-cEE-E
Q psy7057 90 NGIIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDTD-FVSCSNDASIRVWDSTTGKCVHTMYGHPN-FIY-S 165 (557)
Q Consensus 90 ~~~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~~~~-lvs~s~Dg~I~vwd~~~~~~~~~~~~h~~-~V~-~ 165 (557)
++.+++++.|+.|+.|| .+|+.+..+.. ..+.+..+..++. +++++.|+.|+.||..+|+.+..+..+.. .+. +
T Consensus 9 ~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~s 86 (369)
T 2hz6_A 9 ETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQAS 86 (369)
T ss_dssp TTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTTC
T ss_pred CCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCccccccC
Confidence 56899999999999999 68888888876 4455544555664 66778999999999988887766653321 110 1
Q ss_pred EEE-cCCEEEEEeCCCeEEEEECCCCceEeeCCccEEEEEEcCCCc-EEEEEcCCcEEEEecCCCCcchhHHHhccccee
Q psy7057 166 VAA-HGDLITSGGEDQCVCVYQNKAQNSFMIPAMSVWAVAILPNSD-IVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEV 243 (557)
Q Consensus 166 l~~-~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v 243 (557)
... .+..+++++.++.|+.||..+.+.+...... ....++|++. +++++.|+.|+.||..+++..-...... .
T Consensus 87 p~~~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~-~~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~----~ 161 (369)
T 2hz6_A 87 PCRSSDGILYMGKKQDIWYVIDLLTGEKQQTLSSA-FADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATYFD----Y 161 (369)
T ss_dssp SCC-----CCCCEEEEEEEEECCC-----------------------EEEEEEEEEEECCCSSSSSCCCEEEEEE----E
T ss_pred ceEecCCEEEEEeCCCEEEEEECCCCcEEEEecCC-CcccccccCCEEEEEecCCEEEEEECCCCCEEEeEeccc----c
Confidence 111 4556888889999999998766332211111 0234556555 8889999999999998876542211111 1
Q ss_pred EEEeccCC--CceeEEEEeCCCcEEEEecCCChh
Q psy7057 244 KKLKSANE--QEIGGVKVSDDGIVRVFSANPDRQ 275 (557)
Q Consensus 244 ~~l~~~~~--~~~~~vs~s~DG~IrvW~~~~~~~ 275 (557)
........ ....++.++.||.|+.|+...++.
T Consensus 162 ~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~ 195 (369)
T 2hz6_A 162 AASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDV 195 (369)
T ss_dssp CCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCE
T ss_pred cCccccCCccccceEEEECCCCEEEEEECCCCcE
Confidence 11111111 013467788999999999876643
No 232
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.46 E-value=4.8e-06 Score=92.64 Aligned_cols=224 Identities=17% Similarity=0.100 Sum_probs=133.5
Q ss_pred CCCCCCCCEEEEE-----ECCCeEEEEECCCCeEEEE-EcccCCcEEEEEEcCCC-EEEEEECCCe-------------E
Q psy7057 43 LSPGAKVNTLLSA-----SWDMTAKLWCLESQQCKLT-IRQHEMAVWGVIQLANG-IIVTGCADKT-------------I 102 (557)
Q Consensus 43 ~~~~~~~~~l~sg-----s~Dg~i~iwd~~~~~~~~~-l~~h~~~V~~l~~~~~~-~l~sgs~dg~-------------I 102 (557)
++++|++++|+-+ +...+|++||+.+++.+.. +... ....++|+ ++ .|+.++.+.. |
T Consensus 134 ~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~--k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v 210 (693)
T 3iuj_A 134 LSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKDV--KFSGISWL-GNEGFFYSSYDKPDGSELSARTDQHKV 210 (693)
T ss_dssp EEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEEE--ESCCCEEE-TTTEEEEEESSCCC-------CCCCEE
T ss_pred EEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCCc--eeccEEEe-CCCEEEEEEecCcccccccccCCCcEE
Confidence 4678889988743 3335799999999986543 2211 12467899 88 7777777643 8
Q ss_pred EEEeCCCc-----EEEEEeC-CCCCEEEEEEeCCCeEE--EEEC---CCeEEEEECCCCe-EEEEEeCCCCcEEE-EEEc
Q psy7057 103 KLHSEEGE-----FLKTLTG-HTDCVRGLAVLNDTDFV--SCSN---DASIRVWDSTTGK-CVHTMYGHPNFIYS-VAAH 169 (557)
Q Consensus 103 ~vwd~~~~-----~~~~l~~-h~~~V~~l~~~~~~~lv--s~s~---Dg~I~vwd~~~~~-~~~~~~~h~~~V~~-l~~~ 169 (557)
++|++... ++..... |...+.++.++|+++++ +.+. +..|.++|+.++. ....+..+...... +..+
T Consensus 211 ~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~~~~~ 290 (693)
T 3iuj_A 211 YFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDADVSLVDNK 290 (693)
T ss_dssp EEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSCEEEEEEE
T ss_pred EEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCceEEEEecc
Confidence 88984321 2222233 45567889999998733 3332 3589999987763 44556666555544 3446
Q ss_pred CCEEEEEe-CC---CeEEEEECCCC-----ceEeeCCccEEEEEEcCCCc-EEEEE-cCC--cEEEEecCCCCcchhHHH
Q psy7057 170 GDLITSGG-ED---QCVCVYQNKAQ-----NSFMIPAMSVWAVAILPNSD-IVTGS-SDG--IVRVFSANPDRQAEDAVQ 236 (557)
Q Consensus 170 ~~~l~s~s-~D---g~I~iwd~~~~-----~~~~~~~~~v~~v~~~p~g~-l~sg~-~Dg--~I~iwd~~~~~~~~~~~~ 236 (557)
++.|+..+ .+ +.|..+++... +.+..+...+. .|+++++ |+... .++ .|++|++........ ..
T Consensus 291 g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d~~g~~~~~l-~~ 367 (693)
T 3iuj_A 291 GSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDATARVEQFDYEGKRVREV-AL 367 (693)
T ss_dssp TTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTEEEEEEECTTSCEEEEE-CC
T ss_pred CCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECCeeEEEEEECCCCeeEEe-ec
Confidence 66554443 33 57889997653 34555555554 8888887 55444 454 688888875432211 11
Q ss_pred hcccceeEEEeccCCCceeEEEEeCC---CcEEEEecCCC
Q psy7057 237 AQYAEEVKKLKSANEQEIGGVKVSDD---GIVRVFSANPD 273 (557)
Q Consensus 237 ~~~~~~v~~l~~~~~~~~~~vs~s~D---G~IrvW~~~~~ 273 (557)
.....+..+...+......++.++. ++|..|++..+
T Consensus 368 -p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g 406 (693)
T 3iuj_A 368 -PGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSG 406 (693)
T ss_dssp -SSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTC
T ss_pred -CCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCC
Confidence 1122344444444444444444432 78888887654
No 233
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.45 E-value=3e-05 Score=80.62 Aligned_cols=224 Identities=12% Similarity=0.088 Sum_probs=141.4
Q ss_pred cEEEEEeccCcccEEEEEEcCCCc-EEEEE----------CCCcEEEEcCCC-----------------------CCCCC
Q psy7057 2 YKLSTALYGHSMDVRSLSVTPDGC-ILSAS----------RDKSAKLWKPND-----------------------LSPGA 47 (557)
Q Consensus 2 ~kl~~~l~gH~~~V~~l~~spdg~-l~sgs----------~Dg~V~iWd~~~-----------------------~~~~~ 47 (557)
+++..++..-..+ .++++|||+ |+.+. .++.|.++|..+ +.+++
T Consensus 109 ~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~sp 186 (426)
T 3c75_H 109 GRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTP 186 (426)
T ss_dssp TEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECT
T ss_pred CEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcC
Confidence 4566666544455 899999998 65554 477899999876 24567
Q ss_pred CCCEEEEEEC--CCeEEEEECCCCeEEEEEcccCCcEEEEEEcCCC--EEEEEECCCeEEEEeC-CCcEEEE----EeCC
Q psy7057 48 KVNTLLSASW--DMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG--IIVTGCADKTIKLHSE-EGEFLKT----LTGH 118 (557)
Q Consensus 48 ~~~~l~sgs~--Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~--~l~sgs~dg~I~vwd~-~~~~~~~----l~~h 118 (557)
++++++++.. +++|.+.|+.+++.+.++..... ....|++ .+++.+.||.+.+.+. .++.... +...
T Consensus 187 DGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~----~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~ 262 (426)
T 3c75_H 187 DNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDC----YHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTE 262 (426)
T ss_dssp TSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE----EEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCT
T ss_pred CCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCc----eeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccC
Confidence 8899999875 57899999999998888764221 2233332 6677777888777764 3333221 1111
Q ss_pred CCCE-EEEEEeCCCe-EEEEECCCeEEEEECCCCeEE--EEEeC------------CCCcEEEEEEcCCEEEEEeC----
Q psy7057 119 TDCV-RGLAVLNDTD-FVSCSNDASIRVWDSTTGKCV--HTMYG------------HPNFIYSVAAHGDLITSGGE---- 178 (557)
Q Consensus 119 ~~~V-~~l~~~~~~~-lvs~s~Dg~I~vwd~~~~~~~--~~~~~------------h~~~V~~l~~~~~~l~s~s~---- 178 (557)
..++ ..+.+.+++. ++..+..+.+.+.|+...... ..+.- .......+..+++.+++...
T Consensus 263 ~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~ 342 (426)
T 3c75_H 263 DELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDE 342 (426)
T ss_dssp TSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCT
T ss_pred CCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEeccccc
Confidence 1111 1245677644 555567889999998654422 11110 01111233336666555432
Q ss_pred ------CCeEEEEECCCCceEeeC--CccEEEEEEcCCCc--EEEEE-cCCcEEEEecCCCCcc
Q psy7057 179 ------DQCVCVYQNKAQNSFMIP--AMSVWAVAILPNSD--IVTGS-SDGIVRVFSANPDRQA 231 (557)
Q Consensus 179 ------Dg~I~iwd~~~~~~~~~~--~~~v~~v~~~p~g~--l~sg~-~Dg~I~iwd~~~~~~~ 231 (557)
++.|.++|..+.+.+... ....+.++|+|+++ ++++. .++.|.++|..+.+..
T Consensus 343 gthk~~s~~VsVID~~T~kvv~~I~vg~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv 406 (426)
T 3c75_H 343 WKHKAASRFVVVLNAETGERINKIELGHEIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEEL 406 (426)
T ss_dssp TCTTSCEEEEEEEETTTCCEEEEEEEEEEECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEE
T ss_pred ccccCCCCEEEEEECCCCeEEEEEECCCCcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEE
Confidence 357999998877333221 22588999999987 55666 4899999999887654
No 234
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.43 E-value=0.00016 Score=81.69 Aligned_cols=215 Identities=12% Similarity=0.163 Sum_probs=148.7
Q ss_pred cccEEEEEEcCCCcEEEEECCCcEEEEcCCC-----------------------CCCCCCCCEEEEEECCCeEEEEECCC
Q psy7057 12 SMDVRSLSVTPDGCILSASRDKSAKLWKPND-----------------------LSPGAKVNTLLSASWDMTAKLWCLES 68 (557)
Q Consensus 12 ~~~V~~l~~spdg~l~sgs~Dg~V~iWd~~~-----------------------~~~~~~~~~l~sgs~Dg~i~iwd~~~ 68 (557)
...|.++...+++.|..|+.++-+.+|+..+ +..+.+ ..|..|+.+ -|.+|+..+
T Consensus 214 ~~~i~~i~~d~~g~lwigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~-g~lWigt~~-Gl~~~~~~~ 291 (795)
T 4a2l_A 214 TKQIQAILQQSPTRIWVATEGAGLFLINPKTKEIKNYLHSPSNPKSISSNYIRSLAMDSQ-NRLWIGTFN-DLNIYHEGT 291 (795)
T ss_dssp CCCEEEEEEEETTEEEEEEBSSCEEEEETTTTEEEEECCCTTCTTSCSCSBEEEEEECTT-SCEEEEESS-CEEEEETTT
T ss_pred CCeeEEEEEcCCCCEEEEECCCCeEEEeCCCCeEEEeecCCCCccccCCCeEEEEEEcCC-CCEEEEeCC-hhheEcCCC
Confidence 4578899888888888787665577787654 111122 334556655 588899877
Q ss_pred CeEEEEEcc-------cCCcEEEEEEcCCCEEEEEECCCeEEEEeCCCcEEEEEeC-------CCCCEEEEEEeCCCeEE
Q psy7057 69 QQCKLTIRQ-------HEMAVWGVIQLANGIIVTGCADKTIKLHSEEGEFLKTLTG-------HTDCVRGLAVLNDTDFV 134 (557)
Q Consensus 69 ~~~~~~l~~-------h~~~V~~l~~~~~~~l~sgs~dg~I~vwd~~~~~~~~l~~-------h~~~V~~l~~~~~~~lv 134 (557)
++....... ....|.++...++|.|..|+.++-|..++........+.. ....|.++...+++.+.
T Consensus 292 ~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~lW 371 (795)
T 4a2l_A 292 DSFASYSSNPVENGSLSQRSVRSIFMDSQGGMWLGTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDKNLW 371 (795)
T ss_dssp TEEEEECCCTTSTTSCSSSCEEEEEECTTSCEEEEESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECTTSCEE
T ss_pred CeEEEEecCCCCCCCCCCCcEEEEEEeCCcCEEEEECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECCCCCEE
Confidence 664432211 2367999999999989999998889999854333333321 23569999998889998
Q ss_pred EEECCCeEEEEECCCCeEEEEEeC--------CCCcEEEEEEc--CCEEEEEeCCCeEEEEECCCC--ceEe-----eCC
Q psy7057 135 SCSNDASIRVWDSTTGKCVHTMYG--------HPNFIYSVAAH--GDLITSGGEDQCVCVYQNKAQ--NSFM-----IPA 197 (557)
Q Consensus 135 s~s~Dg~I~vwd~~~~~~~~~~~~--------h~~~V~~l~~~--~~~l~s~s~Dg~I~iwd~~~~--~~~~-----~~~ 197 (557)
.|+.++-|..||..+++...-... ....|.++..+ +..|..|+.++-|..|+..+. ..+. .+.
T Consensus 372 iGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~ 451 (795)
T 4a2l_A 372 IGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVN 451 (795)
T ss_dssp EEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSC
T ss_pred EEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCC
Confidence 999988899999877654332211 24678899883 443788888788999997654 2222 134
Q ss_pred ccEEEEEEcCCCcEEEEEcCCcEEEEecCCCC
Q psy7057 198 MSVWAVAILPNSDIVTGSSDGIVRVFSANPDR 229 (557)
Q Consensus 198 ~~v~~v~~~p~g~l~sg~~Dg~I~iwd~~~~~ 229 (557)
..|+++...+++.|..|+.+ -|.+|+..+.+
T Consensus 452 ~~v~~i~~d~~g~lwigt~~-Gl~~~~~~~~~ 482 (795)
T 4a2l_A 452 ENVYAILPDGEGNLWLGTLS-ALVRFNPEQRS 482 (795)
T ss_dssp SCEEEEEECSSSCEEEEESS-CEEEEETTTTE
T ss_pred CeeEEEEECCCCCEEEEecC-ceeEEeCCCCe
Confidence 57999999998888778774 48888877654
No 235
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.42 E-value=3e-05 Score=77.68 Aligned_cols=161 Identities=9% Similarity=-0.043 Sum_probs=106.3
Q ss_pred cccEEEEEEcCCCcEEEEECCCcEEEEcCCC--------------------CCCCCCCCEEEEEEC------CCeEEEEE
Q psy7057 12 SMDVRSLSVTPDGCILSASRDKSAKLWKPND--------------------LSPGAKVNTLLSASW------DMTAKLWC 65 (557)
Q Consensus 12 ~~~V~~l~~spdg~l~sgs~Dg~V~iWd~~~--------------------~~~~~~~~~l~sgs~------Dg~i~iwd 65 (557)
...|.+++++++|+++.++.++ |.+||..+ +.+++++.++++... .+.|..++
T Consensus 89 ~~~v~~i~~~~dg~l~v~~~~g-l~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~ 167 (326)
T 2ghs_A 89 PFMGSALAKISDSKQLIASDDG-LFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA 167 (326)
T ss_dssp SSCEEEEEEEETTEEEEEETTE-EEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE
T ss_pred CCcceEEEEeCCCeEEEEECCC-EEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe
Confidence 4679999999999966666544 88888653 234556666555432 23455555
Q ss_pred CCCCeEEEEEcccCCcEEEEEEcCCC-EE-EEEECCCeEEEEeC---CC-c-----EEEEEeCCCCCEEEEEEeCCCeEE
Q psy7057 66 LESQQCKLTIRQHEMAVWGVIQLANG-II-VTGCADKTIKLHSE---EG-E-----FLKTLTGHTDCVRGLAVLNDTDFV 134 (557)
Q Consensus 66 ~~~~~~~~~l~~h~~~V~~l~~~~~~-~l-~sgs~dg~I~vwd~---~~-~-----~~~~l~~h~~~V~~l~~~~~~~lv 134 (557)
+++... +..+......++|+|++ .+ ++.+.++.|.+|+. ++ . ....+......+..+++.+++.+.
T Consensus 168 --~g~~~~-~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lw 244 (326)
T 2ghs_A 168 --KGKVTK-LFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIW 244 (326)
T ss_dssp --TTEEEE-EEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEE
T ss_pred --CCcEEE-eeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEE
Confidence 454332 33334457789999998 44 45556789999995 34 2 122233344567889999988865
Q ss_pred E-EECCCeEEEEECCCCeEEEEEeCCCCcEEEEEEc---CCEEEEEe
Q psy7057 135 S-CSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAAH---GDLITSGG 177 (557)
Q Consensus 135 s-~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~~---~~~l~s~s 177 (557)
. ...++.|.+||. +++.+..+..+...+.+++|. ++.|+.++
T Consensus 245 va~~~~~~v~~~d~-~g~~~~~i~~~~~~~~~~af~g~d~~~L~vt~ 290 (326)
T 2ghs_A 245 NARWGEGAVDRYDT-DGNHIARYEVPGKQTTCPAFIGPDASRLLVTS 290 (326)
T ss_dssp EEEETTTEEEEECT-TCCEEEEEECSCSBEEEEEEESTTSCEEEEEE
T ss_pred EEEeCCCEEEEECC-CCCEEEEEECCCCCcEEEEEecCCCCEEEEEe
Confidence 4 445688999997 678888887777789999984 34554443
No 236
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.40 E-value=0.00028 Score=79.59 Aligned_cols=215 Identities=10% Similarity=0.088 Sum_probs=146.7
Q ss_pred cccEEEEEEcCCCcEEEEECCCcEEEEcCCC----------------------CCCCCCCCEEEEEECCCeEEEEECCCC
Q psy7057 12 SMDVRSLSVTPDGCILSASRDKSAKLWKPND----------------------LSPGAKVNTLLSASWDMTAKLWCLESQ 69 (557)
Q Consensus 12 ~~~V~~l~~spdg~l~sgs~Dg~V~iWd~~~----------------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~ 69 (557)
...|.++...++|.|..|+.++-|..|+... +..+.+ ..|..|+.++-|..|+..++
T Consensus 309 ~~~i~~i~~D~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~-g~lWiGt~~~Gl~~~~~~~~ 387 (795)
T 4a2l_A 309 QRSVRSIFMDSQGGMWLGTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKD-KNLWIGTNDGGLNLYNPITQ 387 (795)
T ss_dssp SSCEEEEEECTTSCEEEEESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECTT-SCEEEEESSSCEEEECTTTC
T ss_pred CCcEEEEEEeCCcCEEEEECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECCC-CCEEEEECCCCeEEEcCCCC
Confidence 3679999999999999999988888887543 111222 34666788878999998776
Q ss_pred eEEEEEcc--------cCCcEEEEEEcCCCE-EEEEECCCeEEEEeCCCcEEEEEeC-----CCCCEEEEEEeCCCeEEE
Q psy7057 70 QCKLTIRQ--------HEMAVWGVIQLANGI-IVTGCADKTIKLHSEEGEFLKTLTG-----HTDCVRGLAVLNDTDFVS 135 (557)
Q Consensus 70 ~~~~~l~~--------h~~~V~~l~~~~~~~-l~sgs~dg~I~vwd~~~~~~~~l~~-----h~~~V~~l~~~~~~~lvs 135 (557)
+....... ....|.+++..+++. |..|+.++-+..+|........+.. ....|.++...+++.|..
T Consensus 388 ~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwi 467 (795)
T 4a2l_A 388 RFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWL 467 (795)
T ss_dssp CEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEE
T ss_pred cEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEE
Confidence 54432211 246799999888886 9999998889999965444444432 346799999888888887
Q ss_pred EECCCeEEEEECCCCeEEEEEeC------CCCcEEEEEEcC-CEEEEEeCCCeEEEEECCCCce-Ee-------eCCccE
Q psy7057 136 CSNDASIRVWDSTTGKCVHTMYG------HPNFIYSVAAHG-DLITSGGEDQCVCVYQNKAQNS-FM-------IPAMSV 200 (557)
Q Consensus 136 ~s~Dg~I~vwd~~~~~~~~~~~~------h~~~V~~l~~~~-~~l~s~s~Dg~I~iwd~~~~~~-~~-------~~~~~v 200 (557)
|+. +-+.+||..+++....... ....|.++..+. ..|..|+. +-|..|+..+... +. .+...|
T Consensus 468 gt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-~Gl~~~~~~~~~~~~~~~~~~~~l~~~~i 545 (795)
T 4a2l_A 468 GTL-SALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE-EGLSVFKQEGLDIQKASILPVSNVTKLFT 545 (795)
T ss_dssp EES-SCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEES-SCEEEEEEETTEEEECCCSCSCGGGGSCE
T ss_pred Eec-CceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEeC-CceEEEeCCCCeEEEecCCCCCCCCCCee
Confidence 777 4588899877654332211 235788888832 23555555 4577787544321 11 123468
Q ss_pred EEEEEcCCCcEEEEEcCCcEEEEecCCCCc
Q psy7057 201 WAVAILPNSDIVTGSSDGIVRVFSANPDRQ 230 (557)
Q Consensus 201 ~~v~~~p~g~l~sg~~Dg~I~iwd~~~~~~ 230 (557)
.++...++|.+..|+.. -|..|+..+.+.
T Consensus 546 ~~i~~d~~g~lWigT~~-Gl~~~d~~~~~~ 574 (795)
T 4a2l_A 546 NCIYEASNGIIWVGTRE-GFYCFNEKDKQI 574 (795)
T ss_dssp EEEEECTTSCEEEEESS-CEEEEETTTTEE
T ss_pred EEEEECCCCCEEEEeCC-CceeECCCCCcE
Confidence 99999999997777776 477888765543
No 237
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.38 E-value=7e-05 Score=77.83 Aligned_cols=110 Identities=5% Similarity=-0.100 Sum_probs=81.6
Q ss_pred CCCCEEEEEECC-----CeEEEEECCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEE----------CCCeEEEEe-CCC
Q psy7057 47 AKVNTLLSASWD-----MTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGC----------ADKTIKLHS-EEG 109 (557)
Q Consensus 47 ~~~~~l~sgs~D-----g~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs----------~dg~I~vwd-~~~ 109 (557)
+++..+++.... ++|.++|+.+++.+.++.....+ .++++|++ .++.+. .++.|.++| .+.
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~ 159 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTF 159 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCC
Confidence 456666666653 69999999999999998766666 89999999 444443 467899999 566
Q ss_pred cEEEEEeCC-------CCCEEEEEEeCCCe-EEEEEC--CCeEEEEECCCCeEEEEEeC
Q psy7057 110 EFLKTLTGH-------TDCVRGLAVLNDTD-FVSCSN--DASIRVWDSTTGKCVHTMYG 158 (557)
Q Consensus 110 ~~~~~l~~h-------~~~V~~l~~~~~~~-lvs~s~--Dg~I~vwd~~~~~~~~~~~~ 158 (557)
+.+..+.-- ......+.++|+++ ++.+.. +++|.+.|+.+++.+.++.-
T Consensus 160 ~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v 218 (426)
T 3c75_H 160 LPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDV 218 (426)
T ss_dssp CEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEEC
T ss_pred cEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEc
Confidence 676665421 23456789999987 445553 57899999999998888763
No 238
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.24 E-value=0.00031 Score=68.01 Aligned_cols=201 Identities=11% Similarity=0.036 Sum_probs=128.9
Q ss_pred cEEEEEeccCcc--cEEEEEEcCCCcEEEEECCCcEEEEcCCCCCCCCCCCEEEEEECCCeEEEEECCCCeEEEEEccc-
Q psy7057 2 YKLSTALYGHSM--DVRSLSVTPDGCILSASRDKSAKLWKPNDLSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQH- 78 (557)
Q Consensus 2 ~kl~~~l~gH~~--~V~~l~~spdg~l~sgs~Dg~V~iWd~~~~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h- 78 (557)
|++++++. |.. ....++|++++.|+.++.. ..++.|+++|+.+++.+.++...
T Consensus 9 ~~vv~~~p-~~~~~f~~Gl~~~~dg~Lyvstg~-----------------------~~~s~v~~iD~~tg~v~~~i~l~~ 64 (266)
T 2iwa_A 9 VEVLNEFP-HDPYAFTQGLVYAENDTLFESTGL-----------------------YGRSSVRQVALQTGKVENIHKMDD 64 (266)
T ss_dssp EEEEEEEE-CCTTCCEEEEEECSTTEEEEEECS-----------------------TTTCEEEEEETTTCCEEEEEECCT
T ss_pred ceEEEEEE-CCCCCCcccEEEeCCCeEEEECCC-----------------------CCCCEEEEEECCCCCEEEEEecCC
Confidence 56667774 443 3578888877543322110 02467888888888877776422
Q ss_pred CCcEEEEEEcCCCEEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeCCC-eEEEEECCCeEEEEECCCCeEEEEE
Q psy7057 79 EMAVWGVIQLANGIIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDT-DFVSCSNDASIRVWDSTTGKCVHTM 156 (557)
Q Consensus 79 ~~~V~~l~~~~~~~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~~~-~lvs~s~Dg~I~vwd~~~~~~~~~~ 156 (557)
......+++..+.+.++.-.++.+.++| .+.+.+.++..-...-+.++ +++ .++.+..+++|.++|..+.+.+.++
T Consensus 65 ~~fgeGi~~~g~~lyv~t~~~~~v~viD~~t~~v~~~i~~g~~~g~glt--~Dg~~l~vs~gs~~l~viD~~t~~v~~~I 142 (266)
T 2iwa_A 65 SYFGEGLTLLNEKLYQVVWLKNIGFIYDRRTLSNIKNFTHQMKDGWGLA--TDGKILYGSDGTSILYEIDPHTFKLIKKH 142 (266)
T ss_dssp TCCEEEEEEETTEEEEEETTCSEEEEEETTTTEEEEEEECCSSSCCEEE--ECSSSEEEECSSSEEEEECTTTCCEEEEE
T ss_pred CcceEEEEEeCCEEEEEEecCCEEEEEECCCCcEEEEEECCCCCeEEEE--ECCCEEEEECCCCeEEEEECCCCcEEEEE
Confidence 2233456665443555556688999999 56677777753212223344 454 3555557889999999999888887
Q ss_pred eCC--C---CcEEEEEE-cCCEEEEEeCCCeEEEEECCCC---ceEeeC-------------CccEEEEEEcCCCc--EE
Q psy7057 157 YGH--P---NFIYSVAA-HGDLITSGGEDQCVCVYQNKAQ---NSFMIP-------------AMSVWAVAILPNSD--IV 212 (557)
Q Consensus 157 ~~h--~---~~V~~l~~-~~~~l~s~s~Dg~I~iwd~~~~---~~~~~~-------------~~~v~~v~~~p~g~--l~ 212 (557)
.-- . ..+..+.+ ++..++....++.|.+.|..+. ..+... ......++++|+++ ++
T Consensus 143 ~Vg~~~~p~~~~nele~~dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfV 222 (266)
T 2iwa_A 143 NVKYNGHRVIRLNELEYINGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFV 222 (266)
T ss_dssp ECEETTEECCCEEEEEEETTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEE
T ss_pred EECCCCcccccceeEEEECCEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEE
Confidence 632 1 23566777 5544555556789999998776 333221 12568999999987 66
Q ss_pred EEEcCCcEEEEecCCC
Q psy7057 213 TGSSDGIVRVFSANPD 228 (557)
Q Consensus 213 sg~~Dg~I~iwd~~~~ 228 (557)
++...++|.+.++...
T Consensus 223 Tgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 223 TGKLWPKLFEIKLHLV 238 (266)
T ss_dssp EETTCSEEEEEEEEEC
T ss_pred ECCCCCeEEEEEEecc
Confidence 7778899999887653
No 239
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.24 E-value=4.2e-05 Score=77.17 Aligned_cols=183 Identities=12% Similarity=0.041 Sum_probs=116.1
Q ss_pred CCCCCCCCEEEEEEC--CCeEEEEECCCCeEEEEE-------cccCCcEEEEEEcCCCEEEEEEC------CCeEEEEeC
Q psy7057 43 LSPGAKVNTLLSASW--DMTAKLWCLESQQCKLTI-------RQHEMAVWGVIQLANGIIVTGCA------DKTIKLHSE 107 (557)
Q Consensus 43 ~~~~~~~~~l~sgs~--Dg~i~iwd~~~~~~~~~l-------~~h~~~V~~l~~~~~~~l~sgs~------dg~I~vwd~ 107 (557)
+++++++..+++... ++.++||.+.+++.. .+ ..|-..+.++++.+++.|..... +..|.+||.
T Consensus 22 va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~-~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~ 100 (343)
T 2qe8_A 22 ITLTPDGRLFLSLHQFYQPEMQVAELTQDGLI-PFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDT 100 (343)
T ss_dssp EEECTTSCEEEEECGGGCCSCSEEEEETTEEE-ESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEET
T ss_pred EEECCCCCEEEEeCCCCCCceEEEEECCCCee-cCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEEC
Confidence 445556777777542 342555555455432 22 23456899999999995554443 578999995
Q ss_pred -CCcEEEEEeCC------CCCEEEEEEeCC-CeE-EEEE---CCCeEEEEECCCCeEEEEEeCCC---------------
Q psy7057 108 -EGEFLKTLTGH------TDCVRGLAVLND-TDF-VSCS---NDASIRVWDSTTGKCVHTMYGHP--------------- 160 (557)
Q Consensus 108 -~~~~~~~l~~h------~~~V~~l~~~~~-~~l-vs~s---~Dg~I~vwd~~~~~~~~~~~~h~--------------- 160 (557)
+++.+..+... ...+..++++++ +.+ ++.+ .++.|.+||+.+++..+.+.+|.
T Consensus 101 ~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~ 180 (343)
T 2qe8_A 101 LNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVP 180 (343)
T ss_dssp TTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEE
T ss_pred CCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccceeECCEE
Confidence 46666665432 235688999975 554 4555 67899999998888776664431
Q ss_pred --------------CcEEEEEE--cCCEEEEEeCCC-eEEEEECC---CC--------c--eEeeCCccEEEEEEcCCCc
Q psy7057 161 --------------NFIYSVAA--HGDLITSGGEDQ-CVCVYQNK---AQ--------N--SFMIPAMSVWAVAILPNSD 210 (557)
Q Consensus 161 --------------~~V~~l~~--~~~~l~s~s~Dg-~I~iwd~~---~~--------~--~~~~~~~~v~~v~~~p~g~ 210 (557)
..+..|++ +++.|+.+..++ .+..++.. .. . ....+......+++.++|.
T Consensus 181 ~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~ 260 (343)
T 2qe8_A 181 VQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHN 260 (343)
T ss_dssp CBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCC
T ss_pred EEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECCCCC
Confidence 12466777 566777776655 55555521 10 0 1222333456789999998
Q ss_pred -EEEEEcCCcEEEEecC
Q psy7057 211 -IVTGSSDGIVRVFSAN 226 (557)
Q Consensus 211 -l~sg~~Dg~I~iwd~~ 226 (557)
+++...++.|.+|+..
T Consensus 261 l~va~~~~~~V~~~d~~ 277 (343)
T 2qe8_A 261 IYVGDLAHSAIGVITSA 277 (343)
T ss_dssp EEEEEGGGTEEEEEETT
T ss_pred EEEEccCCCeEEEEECC
Confidence 5566678899999983
No 240
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.22 E-value=0.00028 Score=78.32 Aligned_cols=134 Identities=10% Similarity=0.040 Sum_probs=89.6
Q ss_pred CCcEEEEECCCcEEEEcCCC--------CC----------CCC--CCCEEEEEE------CCCeEEEEECCCCeEEEEEc
Q psy7057 23 DGCILSASRDKSAKLWKPND--------LS----------PGA--KVNTLLSAS------WDMTAKLWCLESQQCKLTIR 76 (557)
Q Consensus 23 dg~l~sgs~Dg~V~iWd~~~--------~~----------~~~--~~~~l~sgs------~Dg~i~iwd~~~~~~~~~l~ 76 (557)
+++++.++.|+.|..+|..+ .. ..| .+..++.++ .++.|+.||..+|+.+..+.
T Consensus 121 ~g~v~v~~~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 200 (689)
T 1yiq_A 121 KGKVYVGVLDGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFY 200 (689)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred CCEEEEEccCCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEec
Confidence 45688888999999999876 11 011 134555554 36899999999999988775
Q ss_pred ccC-------------------------------CcEEEEEEcCCC-EEEEEECCCe-------------------EEEE
Q psy7057 77 QHE-------------------------------MAVWGVIQLANG-IIVTGCADKT-------------------IKLH 105 (557)
Q Consensus 77 ~h~-------------------------------~~V~~l~~~~~~-~l~sgs~dg~-------------------I~vw 105 (557)
... .....+++.+++ +++.++.++. |..+
T Consensus 201 ~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~Al 280 (689)
T 1yiq_A 201 TVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAV 280 (689)
T ss_dssp SSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEE
T ss_pred ccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEE
Confidence 210 011246777755 8888887764 8999
Q ss_pred e-CCCcEEEEEeC--CC-------CCEEEEEEeCCC----eEEEEECCCeEEEEECCCCeEEEEE
Q psy7057 106 S-EEGEFLKTLTG--HT-------DCVRGLAVLNDT----DFVSCSNDASIRVWDSTTGKCVHTM 156 (557)
Q Consensus 106 d-~~~~~~~~l~~--h~-------~~V~~l~~~~~~----~lvs~s~Dg~I~vwd~~~~~~~~~~ 156 (557)
| .+|+.+..+.. |. ..+.......++ .++.++.+|.++++|.++|+.+...
T Consensus 281 D~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~ 345 (689)
T 1yiq_A 281 NADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAK 345 (689)
T ss_dssp ETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEE
T ss_pred EccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccc
Confidence 9 67888877764 22 122222222244 3668899999999999999987543
No 241
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.20 E-value=0.00011 Score=81.33 Aligned_cols=210 Identities=10% Similarity=0.015 Sum_probs=136.2
Q ss_pred CCcEEEEECCCcEEEEcCCC--------CC------CC------CCCCEEEEEEC------CCeEEEEECCCCeEEEEEc
Q psy7057 23 DGCILSASRDKSAKLWKPND--------LS------PG------AKVNTLLSASW------DMTAKLWCLESQQCKLTIR 76 (557)
Q Consensus 23 dg~l~sgs~Dg~V~iWd~~~--------~~------~~------~~~~~l~sgs~------Dg~i~iwd~~~~~~~~~l~ 76 (557)
+++|+.++.|+.|..+|..+ .. .. ..+..++.++. ++.|+.+|..+|+.+.++.
T Consensus 128 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~ 207 (677)
T 1kb0_A 128 KGKVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWF 207 (677)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred CCEEEEEcCCCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEEECCEEEEEecccccCCCCEEEEEECCCCcEEEEec
Confidence 45688888999999999876 11 00 02356666654 7999999999999988875
Q ss_pred ccCCc--------------------------------EEEEEEcCCC-EEEEEECCC-------------------eEEE
Q psy7057 77 QHEMA--------------------------------VWGVIQLANG-IIVTGCADK-------------------TIKL 104 (557)
Q Consensus 77 ~h~~~--------------------------------V~~l~~~~~~-~l~sgs~dg-------------------~I~v 104 (557)
..... ...+++.+++ +++.++.++ .|..
T Consensus 208 ~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~A 287 (677)
T 1kb0_A 208 SVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVA 287 (677)
T ss_dssp SSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEE
T ss_pred cCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEE
Confidence 43211 1246777765 777777664 4888
Q ss_pred Ee-CCCcEEEEEeC--CC-------CCEEEEEEeCCC---e-EEEEECCCeEEEEECCCCeEEEEEeCCCC---------
Q psy7057 105 HS-EEGEFLKTLTG--HT-------DCVRGLAVLNDT---D-FVSCSNDASIRVWDSTTGKCVHTMYGHPN--------- 161 (557)
Q Consensus 105 wd-~~~~~~~~l~~--h~-------~~V~~l~~~~~~---~-lvs~s~Dg~I~vwd~~~~~~~~~~~~h~~--------- 161 (557)
+| .+|+.+..+.. |. .....+....+| . ++.++.+|.++++|..+|+.+..+.....
T Consensus 288 lD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~ 367 (677)
T 1kb0_A 288 LDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKH 367 (677)
T ss_dssp ECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTT
T ss_pred EECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCC
Confidence 99 57888777653 31 112222333355 3 67899999999999999999877652210
Q ss_pred --cEE------------------------EEEE--cCCEEEEEeC-----------------------------------
Q psy7057 162 --FIY------------------------SVAA--HGDLITSGGE----------------------------------- 178 (557)
Q Consensus 162 --~V~------------------------~l~~--~~~~l~s~s~----------------------------------- 178 (557)
.+. .+++ +..++++...
T Consensus 368 g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~ 447 (677)
T 1kb0_A 368 GKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFN 447 (677)
T ss_dssp SCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEEC
T ss_pred CceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccccccc
Confidence 111 3445 3456655432
Q ss_pred --------CCeEEEEECCCCceEee--CCccEEEEEEcCCCc-EEEEEcCCcEEEEecCCCCcch
Q psy7057 179 --------DQCVCVYQNKAQNSFMI--PAMSVWAVAILPNSD-IVTGSSDGIVRVFSANPDRQAE 232 (557)
Q Consensus 179 --------Dg~I~iwd~~~~~~~~~--~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~~~~ 232 (557)
.+.|..||+.+.+.+-. +..+++...+...+. +++++.||.+++||..+++.+.
T Consensus 448 ~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw 512 (677)
T 1kb0_A 448 AEPPKSKPFGRLLAWDPVAQKAAWSVEHVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLW 512 (677)
T ss_dssp SSCCCSCCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEE
T ss_pred cccCCCCCccEEEEEeCCCCcEEeecCCCCCCcCcceEeCCCEEEEECCCCcEEEEECCCCceee
Confidence 27899999887733221 222344445555555 7788999999999999887653
No 242
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.19 E-value=0.00076 Score=75.83 Aligned_cols=255 Identities=9% Similarity=0.019 Sum_probs=158.8
Q ss_pred ccEEEEEEcCCCcEEEEECCCcEEEEcCCC-----------------------CCCCCCCCEEEEEECCCeEEEEECCCC
Q psy7057 13 MDVRSLSVTPDGCILSASRDKSAKLWKPND-----------------------LSPGAKVNTLLSASWDMTAKLWCLESQ 69 (557)
Q Consensus 13 ~~V~~l~~spdg~l~sgs~Dg~V~iWd~~~-----------------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~ 69 (557)
..|.++...++|.|..|+.++-+..|+..+ +..+.++ .|..|+.+ -+.+||..++
T Consensus 163 ~~i~~i~~d~~g~lwigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g-~lwigt~~-Gl~~~d~~~~ 240 (781)
T 3v9f_A 163 EQTWTATEAEDGKLYIGHVEGGLSILSLNDKSVKHFVHDPQNPNSLPGNDVRCIYKDTNG-NIWIGTSK-GLALFNANTE 240 (781)
T ss_dssp CCEEEEEEEETTEEEEEETTTEEEEEETTTTEEEEECC--------CCSSEEEEEECTTC-CEEEEETT-EEEEEETTTT
T ss_pred cceEEEEECCCCCEEEEecCCCeEEEcCCCCceEeeecCCCCcccCCCCceeEEEEcCCC-CEEEEeCC-cHheECCCCC
Confidence 468899888888888888775677777544 1111222 34555655 6888998776
Q ss_pred eEEEEEc-------ccCCcEEEEEEcCCCEEEEEECCCeEEEEeCCCcEEEEEe---------------CCCCCEEEEEE
Q psy7057 70 QCKLTIR-------QHEMAVWGVIQLANGIIVTGCADKTIKLHSEEGEFLKTLT---------------GHTDCVRGLAV 127 (557)
Q Consensus 70 ~~~~~l~-------~h~~~V~~l~~~~~~~l~sgs~dg~I~vwd~~~~~~~~l~---------------~h~~~V~~l~~ 127 (557)
+...... .....|.++...++|.|..|+..+-|.+++........+. .....|.++..
T Consensus 241 ~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~ 320 (781)
T 3v9f_A 241 TFTNFHNNPGNIHGALSSYIFSIKQLKDNKLWIATELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQ 320 (781)
T ss_dssp EEEC-----------CCCCEEEEEECTTSEEEEEESSSCEEEEETTCC---------CEEECBCSSTTSBSSSCEEEEEE
T ss_pred cEEEEEcCCCccccccCceEEEEEECCCCCEEEEeCCCCeEEECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEE
Confidence 5432211 1246799999989998888888667888885443322221 12457999999
Q ss_pred eCCCeEEEEECCCeEEEEECCCCeEEEEEe----------CCCCcEEEEEEcC-CEEEEEeCCCeEEEEECCCCc--eE-
Q psy7057 128 LNDTDFVSCSNDASIRVWDSTTGKCVHTMY----------GHPNFIYSVAAHG-DLITSGGEDQCVCVYQNKAQN--SF- 193 (557)
Q Consensus 128 ~~~~~lvs~s~Dg~I~vwd~~~~~~~~~~~----------~h~~~V~~l~~~~-~~l~s~s~Dg~I~iwd~~~~~--~~- 193 (557)
.+++.+..|+.++-|..++..+..... +. .....|.++..+. ..|..|+.++-|..|+..+.. .+
T Consensus 321 D~~g~lWigt~~~Gl~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~ 399 (781)
T 3v9f_A 321 DSFNNIWIGTWGGGINFISNAPPTFHT-WSYSPTQMNESSLSNKVVSSVCDDGQGKLWIGTDGGGINVFENGKRVAIYNK 399 (781)
T ss_dssp CSSCCEEEEEBSSCEEEECSSCCSCEE-EC----CCCSSCCSSSCEEEEEECTTSCEEEEEBSSCEEEEETTEEEEECC-
T ss_pred eCCCCEEEEecCCeEEEeCCCCCccee-eccCccccccCCCCCcceEEEEEcCCCCEEEEeCCCcEEEEECCCCeEEEcc
Confidence 888988899988889999976554322 21 0235789998843 457777767778888865431 11
Q ss_pred ---eeCCccEEEEEEcCCCcEEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEec
Q psy7057 194 ---MIPAMSVWAVAILPNSDIVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSA 270 (557)
Q Consensus 194 ---~~~~~~v~~v~~~p~g~l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~ 270 (557)
......|++++..+++.|..|+.++-|..++..+++.............+..+....... +-.++. +-|.+|+.
T Consensus 400 ~~~~~~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~--lwigt~-~Gl~~~~~ 476 (781)
T 3v9f_A 400 ENRELLSNSVLCSLKDSEGNLWFGTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKK--IWIGTH-AGVFVIDL 476 (781)
T ss_dssp ----CCCSBEEEEEECTTSCEEEEETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSE--EEEEET-TEEEEEES
T ss_pred CCCCCCCcceEEEEECCCCCEEEEeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCC--EEEEEC-CceEEEeC
Confidence 123357999999888888888887778888876554322111011223455554443333 333444 44667776
Q ss_pred CCC
Q psy7057 271 NPD 273 (557)
Q Consensus 271 ~~~ 273 (557)
...
T Consensus 477 ~~~ 479 (781)
T 3v9f_A 477 ASK 479 (781)
T ss_dssp SSS
T ss_pred CCC
Confidence 543
No 243
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.19 E-value=0.00099 Score=74.89 Aligned_cols=257 Identities=11% Similarity=0.019 Sum_probs=161.2
Q ss_pred cccEEEEEEcCCCcEEEEECCCcEEEEcCCCC------------------------------CCCCCCCEEEEEECCCeE
Q psy7057 12 SMDVRSLSVTPDGCILSASRDKSAKLWKPNDL------------------------------SPGAKVNTLLSASWDMTA 61 (557)
Q Consensus 12 ~~~V~~l~~spdg~l~sgs~Dg~V~iWd~~~~------------------------------~~~~~~~~l~sgs~Dg~i 61 (557)
...|+++...++|.|..|+..+-|.+++..+- ..+. ...|-.|+.++-|
T Consensus 257 ~~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~-~g~lWigt~~~Gl 335 (781)
T 3v9f_A 257 SSYIFSIKQLKDNKLWIATELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDS-FNNIWIGTWGGGI 335 (781)
T ss_dssp CCCEEEEEECTTSEEEEEESSSCEEEEETTCC---------CEEECBCSSTTSBSSSCEEEEEECS-SCCEEEEEBSSCE
T ss_pred CceEEEEEECCCCCEEEEeCCCCeEEECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeC-CCCEEEEecCCeE
Confidence 35799999999999888888566777775541 0111 2345667777778
Q ss_pred EEEECCCCeEEEEEc------c---cCCcEEEEEEcCCCEEEEEECCCeEEEEeCCCcEEEEE----eCCCCCEEEEEEe
Q psy7057 62 KLWCLESQQCKLTIR------Q---HEMAVWGVIQLANGIIVTGCADKTIKLHSEEGEFLKTL----TGHTDCVRGLAVL 128 (557)
Q Consensus 62 ~iwd~~~~~~~~~l~------~---h~~~V~~l~~~~~~~l~sgs~dg~I~vwd~~~~~~~~l----~~h~~~V~~l~~~ 128 (557)
..++..+........ . ....|.+++..+++.|..|+.++-|..++........+ ......|.++...
T Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d 415 (781)
T 3v9f_A 336 NFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGKLWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKD 415 (781)
T ss_dssp EEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSCEEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEEC
T ss_pred EEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCCEEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEEC
Confidence 888876554322110 0 23579999998888888888777788888554333222 1234679999988
Q ss_pred CCCeEEEEECCCeEEEEECCCCeEEEEEe--CCCCcEEEEEEc-CCEEEEEeCCCeEEEEECCCC--ceEeeC------C
Q psy7057 129 NDTDFVSCSNDASIRVWDSTTGKCVHTMY--GHPNFIYSVAAH-GDLITSGGEDQCVCVYQNKAQ--NSFMIP------A 197 (557)
Q Consensus 129 ~~~~lvs~s~Dg~I~vwd~~~~~~~~~~~--~h~~~V~~l~~~-~~~l~s~s~Dg~I~iwd~~~~--~~~~~~------~ 197 (557)
+++.|..|+.++-|..+|..+++...... .....|.++..+ ...|..|+. +-|..|+..+. ..+... .
T Consensus 416 ~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lwigt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~ 494 (781)
T 3v9f_A 416 SEGNLWFGTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIWIGTH-AGVFVIDLASKKVIHHYDTSNSQLLE 494 (781)
T ss_dssp TTSCEEEEETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEEEEET-TEEEEEESSSSSCCEEECTTTSSCSC
T ss_pred CCCCEEEEeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEEEEEC-CceEEEeCCCCeEEecccCccccccc
Confidence 88888888887889999977765432211 134678998884 345666776 56888886543 333221 3
Q ss_pred ccEEEEEEcCCCcEEEEEcCCcEEEEecCCCCcchhHHHhc-ccceeEEEeccCCCceeEEEEeCCCcEEEEecCC
Q psy7057 198 MSVWAVAILPNSDIVTGSSDGIVRVFSANPDRQAEDAVQAQ-YAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANP 272 (557)
Q Consensus 198 ~~v~~v~~~p~g~l~sg~~Dg~I~iwd~~~~~~~~~~~~~~-~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~ 272 (557)
..|.++...++|.+..|+.++-|..|+..+.+......... ....+..+....... +-.++.+|.|..|+...
T Consensus 495 ~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~--lWi~T~~Glv~~~d~~~ 568 (781)
T 3v9f_A 495 NFVRSIAQDSEGRFWIGTFGGGVGIYTPDMQLVRKFNQYEGFCSNTINQIYRSSKGQ--MWLATGEGLVCFPSARN 568 (781)
T ss_dssp SCEEEEEECTTCCEEEEESSSCEEEECTTCCEEEEECTTTTCSCSCEEEEEECTTSC--EEEEETTEEEEESCTTT
T ss_pred ceeEEEEEcCCCCEEEEEcCCCEEEEeCCCCeEEEccCCCCCCCCeeEEEEECCCCC--EEEEECCCceEEECCCC
Confidence 57899999999998888875557778876543321111111 122344444433333 23334466546666543
No 244
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.13 E-value=0.0011 Score=64.04 Aligned_cols=202 Identities=8% Similarity=0.035 Sum_probs=136.7
Q ss_pred eEEEEEcccC--CcEEEEEEcCCCEEEEEE-C--CCeEEEEe-CCCcEEEEEeC-CCCCEEEEEEeCCCeEEEEECCCeE
Q psy7057 70 QCKLTIRQHE--MAVWGVIQLANGIIVTGC-A--DKTIKLHS-EEGEFLKTLTG-HTDCVRGLAVLNDTDFVSCSNDASI 142 (557)
Q Consensus 70 ~~~~~l~~h~--~~V~~l~~~~~~~l~sgs-~--dg~I~vwd-~~~~~~~~l~~-h~~~V~~l~~~~~~~lvs~s~Dg~I 142 (557)
+.+.++. |. .....+.|++++.|..++ . ++.|++.| .+++.+..+.- .......+++..+..+++.-.++.+
T Consensus 10 ~vv~~~p-~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~~~~~v 88 (266)
T 2iwa_A 10 EVLNEFP-HDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVWLKNIG 88 (266)
T ss_dssp EEEEEEE-CCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEETTCSEE
T ss_pred eEEEEEE-CCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEecCCEE
Confidence 4455553 54 346899999988444443 3 58999999 56777777652 2223345666643334566678999
Q ss_pred EEEECCCCeEEEEEeCCCCcEEEEEEcCCEEEEEeCCCeEEEEECCCC---ceEeeC-----CccEEEEEEcCCCcEEEE
Q psy7057 143 RVWDSTTGKCVHTMYGHPNFIYSVAAHGDLITSGGEDQCVCVYQNKAQ---NSFMIP-----AMSVWAVAILPNSDIVTG 214 (557)
Q Consensus 143 ~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~l~s~s~Dg~I~iwd~~~~---~~~~~~-----~~~v~~v~~~p~g~l~sg 214 (557)
.++|..+.+.+.++......-+.++.+++.++++..++.|.++|..+. ..+... -..++.+.+. ++.+.+.
T Consensus 89 ~viD~~t~~v~~~i~~g~~~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn 167 (266)
T 2iwa_A 89 FIYDRRTLSNIKNFTHQMKDGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWAN 167 (266)
T ss_dssp EEEETTTTEEEEEEECCSSSCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEE
T ss_pred EEEECCCCcEEEEEECCCCCeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEe
Confidence 999999999999986321333568888877776667899999998775 233221 1236778887 6775544
Q ss_pred E-cCCcEEEEecCCCCcchhHHHhc-----------ccceeEEEeccCCCceeEEEEeCCCcEEEEecCCC
Q psy7057 215 S-SDGIVRVFSANPDRQAEDAVQAQ-----------YAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPD 273 (557)
Q Consensus 215 ~-~Dg~I~iwd~~~~~~~~~~~~~~-----------~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~~ 273 (557)
. .++.|.+.|..+++......... .......+.+.+.....++++...+.|.+.++.+.
T Consensus 168 ~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 168 IWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp ETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEEC
T ss_pred cCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEecc
Confidence 4 57899999999887643222111 11345778888888888899999999999887654
No 245
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.12 E-value=0.0001 Score=75.25 Aligned_cols=207 Identities=8% Similarity=-0.003 Sum_probs=125.8
Q ss_pred eEEEEECCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEE----------CCCeEEEEe-CCCcEEEEEeCC-------CC
Q psy7057 60 TAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGC----------ADKTIKLHS-EEGEFLKTLTGH-------TD 120 (557)
Q Consensus 60 ~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs----------~dg~I~vwd-~~~~~~~~l~~h-------~~ 120 (557)
+|.++|..+++.+.++.....+ .+.++|++ .++.+. .++.|.+|| .+++.+.++... ..
T Consensus 47 ~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~ 124 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGP 124 (368)
T ss_dssp EEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSC
T ss_pred eEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCC
Confidence 8889999999999998766666 79999998 555554 378899999 677778877533 12
Q ss_pred CEEEEEEeCCCe-EEEEEC--CCeEEE--EECCCCeEEEEEeCCC------------------CcEEEEE----------
Q psy7057 121 CVRGLAVLNDTD-FVSCSN--DASIRV--WDSTTGKCVHTMYGHP------------------NFIYSVA---------- 167 (557)
Q Consensus 121 ~V~~l~~~~~~~-lvs~s~--Dg~I~v--wd~~~~~~~~~~~~h~------------------~~V~~l~---------- 167 (557)
....+.++|+++ ++.+.. +..+.+ +|+.+ +.++.... +.+..+.
T Consensus 125 ~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~~~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~ 201 (368)
T 1mda_H 125 RVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGI 201 (368)
T ss_dssp CTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEECSSCCCCEEEETTEEECCCCTTSCEEEECCSSCCCCEE
T ss_pred CcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEECCCceEEccCCCeEEEEEcCCCCEEEEECccccccCCe
Confidence 456789999987 555553 467888 98765 33332100 0000011
Q ss_pred -----------------E-cCCEEEEEeCCCeEEEEECCCC-ceEee----C-------C---ccEEEEEEcCCCc-EEE
Q psy7057 168 -----------------A-HGDLITSGGEDQCVCVYQNKAQ-NSFMI----P-------A---MSVWAVAILPNSD-IVT 213 (557)
Q Consensus 168 -----------------~-~~~~l~s~s~Dg~I~iwd~~~~-~~~~~----~-------~---~~v~~v~~~p~g~-l~s 213 (557)
. ++..++..+. +.+.+.|.... ..+.. . . .....++++|+++ ++.
T Consensus 202 v~~~~t~~i~vg~~P~~~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV 280 (368)
T 1mda_H 202 VGAQCTGAQNCSSQAAQANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMI 280 (368)
T ss_dssp CCCCSCTTSCBCSCCEEETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEE
T ss_pred EEEEeeeeeeCCCCccccccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEE
Confidence 1 1111222222 44555554321 11100 0 0 0011267999987 544
Q ss_pred EEc---------CCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEe-CCCcEEEEecCCChh
Q psy7057 214 GSS---------DGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVS-DDGIVRVFSANPDRQ 275 (557)
Q Consensus 214 g~~---------Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s-~DG~IrvW~~~~~~~ 275 (557)
+.. ++.+.++|..+.+........ .....+.+.++....+++.. .++.|.|+|+.+.+.
T Consensus 281 ~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg---~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kv 349 (368)
T 1mda_H 281 LTVEHSRSCLAAAENTSSVTASVGQTSGPISNG---HDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQD 349 (368)
T ss_dssp EEEECSSCTTSCEEEEEEEESSSCCEEECCEEE---EEECEEEECCSSSCEEEEEETTTTEEEEEESSSCEE
T ss_pred EeccccCcccccCCCEEEEECCCCeEEEEEECC---CCcceEEECCCCCEEEEEccCCCCeEEEEECCCCcE
Confidence 322 235669999987765433222 24566777777766677777 699999999887643
No 246
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.05 E-value=4.8e-05 Score=77.60 Aligned_cols=217 Identities=11% Similarity=-0.004 Sum_probs=130.3
Q ss_pred cEEEEEeccCcccEEEEEEcCCCc-EEEEE----------CCCcEEEEcCCC-----------------------CCCCC
Q psy7057 2 YKLSTALYGHSMDVRSLSVTPDGC-ILSAS----------RDKSAKLWKPND-----------------------LSPGA 47 (557)
Q Consensus 2 ~kl~~~l~gH~~~V~~l~~spdg~-l~sgs----------~Dg~V~iWd~~~-----------------------~~~~~ 47 (557)
+++..++..-..+ .++++||++ ++.+. .+++|.+||+.+ +.+++
T Consensus 56 ~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~Sp 133 (368)
T 1mda_H 56 GVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCA 133 (368)
T ss_dssp TEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECT
T ss_pred CeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcC
Confidence 5667777654456 799999998 66554 478899999876 23456
Q ss_pred CCCEEEEEEC--CCeEEE--EECCCCeEEEEEcccCCcEEEEEEcCCC--EEEEEECCCeEEEEeCCC------cEEE--
Q psy7057 48 KVNTLLSASW--DMTAKL--WCLESQQCKLTIRQHEMAVWGVIQLANG--IIVTGCADKTIKLHSEEG------EFLK-- 113 (557)
Q Consensus 48 ~~~~l~sgs~--Dg~i~i--wd~~~~~~~~~l~~h~~~V~~l~~~~~~--~l~sgs~dg~I~vwd~~~------~~~~-- 113 (557)
++++++++.. +..+.+ +|+.+ +.++..- .. ....|++ .+++.+.|+.+.+.+... +.+.
T Consensus 134 DGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~-~~---~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~ 206 (368)
T 1mda_H 134 SSACLLFFLFGSSAAAGLSVPGASD---DQLTKSA-SC---FHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQC 206 (368)
T ss_dssp TSSCEEEEECSSSCEEEEEETTTEE---EEEEECS-SC---CCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCS
T ss_pred CCCEEEEEccCCCCeEEEEEEchhh---ceEEECC-Cc---eEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEe
Confidence 7888888875 356888 88766 3444311 11 1122333 566677788877777443 1111
Q ss_pred --EEeCCCCCEEEEEEeCCCeEEEEECCCeEEEEECCCC--eEEEEEeC------------CCCcEEEEEEcCCEEEEEe
Q psy7057 114 --TLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTG--KCVHTMYG------------HPNFIYSVAAHGDLITSGG 177 (557)
Q Consensus 114 --~l~~h~~~V~~l~~~~~~~lvs~s~Dg~I~vwd~~~~--~~~~~~~~------------h~~~V~~l~~~~~~l~s~s 177 (557)
.+.-...+. .....+.++..+. +.+.+.|+.+. +.+..+.- +......+..+++.++.+.
T Consensus 207 t~~i~vg~~P~---~~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~ 282 (368)
T 1mda_H 207 TGAQNCSSQAA---QANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILT 282 (368)
T ss_dssp CTTSCBCSCCE---EETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEE
T ss_pred eeeeeCCCCcc---ccccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEe
Confidence 011112233 3333455665556 89999998643 23332211 1111123444777666543
Q ss_pred C---------CCeEEEEECCCCceEeeC--CccEEEEEEcCCCc--EEEEE-cCCcEEEEecCCCCcc
Q psy7057 178 E---------DQCVCVYQNKAQNSFMIP--AMSVWAVAILPNSD--IVTGS-SDGIVRVFSANPDRQA 231 (557)
Q Consensus 178 ~---------Dg~I~iwd~~~~~~~~~~--~~~v~~v~~~p~g~--l~sg~-~Dg~I~iwd~~~~~~~ 231 (557)
. +..+.++|+.+.+.+... ....+.++++|+++ +++.. .++.|.++|..+.+..
T Consensus 283 ~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv 350 (368)
T 1mda_H 283 VEHSRSCLAAAENTSSVTASVGQTSGPISNGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQ 350 (368)
T ss_dssp EECSSCTTSCEEEEEEEESSSCCEEECCEEEEEECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEE
T ss_pred ccccCcccccCCCEEEEECCCCeEEEEEECCCCcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEE
Confidence 2 235669998777433221 22588999999997 55666 5999999999987654
No 247
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.05 E-value=0.00054 Score=70.83 Aligned_cols=181 Identities=11% Similarity=0.023 Sum_probs=118.2
Q ss_pred CCCCEEE-EEECCCeEEEEECCCC----eEEEEEc------c-cCCcEEEEEEcCCCEEEEEECC------CeEEEEe-C
Q psy7057 47 AKVNTLL-SASWDMTAKLWCLESQ----QCKLTIR------Q-HEMAVWGVIQLANGIIVTGCAD------KTIKLHS-E 107 (557)
Q Consensus 47 ~~~~~l~-sgs~Dg~i~iwd~~~~----~~~~~l~------~-h~~~V~~l~~~~~~~l~sgs~d------g~I~vwd-~ 107 (557)
.+.++|+ ++..+++|.++|+.+. +...++. . .......+.++|+|+++++..+ +.+.+.| .
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdGi~Vs~~g~~~g~~~g~v~vlD~~ 172 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDAIYISALGNEEGEGPGGILMLDHY 172 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSCEEEEEEEETTSCSCCEEEEECTT
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCeEEEEcCCCcCCCCCCeEEEEECC
Confidence 4555555 4667889999998765 6666673 1 1224556788899966666555 7899999 5
Q ss_pred CCcEEEEEeCCC---CCEEEEEEeCCCeEE-EEE-------------------CCCeEEEEECCCCeEEEEEeCC-C-Cc
Q psy7057 108 EGEFLKTLTGHT---DCVRGLAVLNDTDFV-SCS-------------------NDASIRVWDSTTGKCVHTMYGH-P-NF 162 (557)
Q Consensus 108 ~~~~~~~l~~h~---~~V~~l~~~~~~~lv-s~s-------------------~Dg~I~vwd~~~~~~~~~~~~h-~-~~ 162 (557)
+.+.+.++..-. ..-..+.|+|++.++ +.. .+.+|.+||+.+++.+.++.-- . ..
T Consensus 173 T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~ 252 (462)
T 2ece_A 173 SFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRM 252 (462)
T ss_dssp TCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEE
T ss_pred CCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCc
Confidence 578887776221 223457889997744 443 2789999999999888888742 1 34
Q ss_pred EEEEEE----cCCEEEEEe------CCCeEEEEECCCC-----ceEeeC------------------CccEEEEEEcCCC
Q psy7057 163 IYSVAA----HGDLITSGG------EDQCVCVYQNKAQ-----NSFMIP------------------AMSVWAVAILPNS 209 (557)
Q Consensus 163 V~~l~~----~~~~l~s~s------~Dg~I~iwd~~~~-----~~~~~~------------------~~~v~~v~~~p~g 209 (557)
.+.+.| +++++++++ .+++|.+|..... +.+... ......+.++|++
T Consensus 253 P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DG 332 (462)
T 2ece_A 253 ALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDD 332 (462)
T ss_dssp EEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTS
T ss_pred cceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCC
Confidence 455555 566655555 5667876542211 111111 1346789999999
Q ss_pred c-EE-EEEcCCcEEEEecCC
Q psy7057 210 D-IV-TGSSDGIVRVFSANP 227 (557)
Q Consensus 210 ~-l~-sg~~Dg~I~iwd~~~ 227 (557)
+ |. +.-..+.|.+|++..
T Consensus 333 rfLYVSnrg~d~VavfdV~d 352 (462)
T 2ece_A 333 KFLYLSLWGIGEVRQYDISN 352 (462)
T ss_dssp CEEEEEETTTTEEEEEECSS
T ss_pred CEEEEEeCCCCEEEEEEecC
Confidence 9 43 444478999999863
No 248
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.04 E-value=0.0013 Score=63.26 Aligned_cols=195 Identities=9% Similarity=0.055 Sum_probs=120.3
Q ss_pred cEEEEEEcCCC-cEE-EEECCCcEEEEcCCC----------------CCCCCCCCEEEEE-ECCCeEEEEECCCCeEEEE
Q psy7057 14 DVRSLSVTPDG-CIL-SASRDKSAKLWKPND----------------LSPGAKVNTLLSA-SWDMTAKLWCLESQQCKLT 74 (557)
Q Consensus 14 ~V~~l~~spdg-~l~-sgs~Dg~V~iWd~~~----------------~~~~~~~~~l~sg-s~Dg~i~iwd~~~~~~~~~ 74 (557)
.+.+++|++++ .|+ +-...+.|..+++.. +.+++.+..|+.+ ...+.|.++++........
T Consensus 37 ~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~ 116 (267)
T 1npe_A 37 VIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVL 116 (267)
T ss_dssp EEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE
T ss_pred cEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEE
Confidence 45688999865 455 445678899998765 3344444444444 4457888888765332222
Q ss_pred EcccCCcEEEEEEcCC-CEEEEEEC---CCeEEEEeCCCcEEEEEe-CCCCCEEEEEEeCC-CeE-EEEECCCeEEEEEC
Q psy7057 75 IRQHEMAVWGVIQLAN-GIIVTGCA---DKTIKLHSEEGEFLKTLT-GHTDCVRGLAVLND-TDF-VSCSNDASIRVWDS 147 (557)
Q Consensus 75 l~~h~~~V~~l~~~~~-~~l~sgs~---dg~I~vwd~~~~~~~~l~-~h~~~V~~l~~~~~-~~l-vs~s~Dg~I~vwd~ 147 (557)
+.........+++.|+ +.|..+.. .+.|..++.++.....+. ..-.....++++++ +.+ ++-...+.|.++|+
T Consensus 117 ~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~ 196 (267)
T 1npe_A 117 FDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNP 196 (267)
T ss_dssp ECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred EECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEec
Confidence 2222356789999994 55555544 368888887766544443 23356889999986 454 46666789999998
Q ss_pred CCCeEEEEEeCCCCcEEEEEEcCCEEEEEe-CCCeEEEEECCCCc---eEeeCC-ccEEEEEEcCCC
Q psy7057 148 TTGKCVHTMYGHPNFIYSVAAHGDLITSGG-EDQCVCVYQNKAQN---SFMIPA-MSVWAVAILPNS 209 (557)
Q Consensus 148 ~~~~~~~~~~~h~~~V~~l~~~~~~l~s~s-~Dg~I~iwd~~~~~---~~~~~~-~~v~~v~~~p~g 209 (557)
........+.. ......++.++..|+.+. ..+.|..+|..+.+ .+.... ...+.+++.|++
T Consensus 197 ~g~~~~~~~~~-~~~P~gi~~d~~~lyva~~~~~~v~~~d~~~g~~~~~i~~g~~~~p~gi~~~~~~ 262 (267)
T 1npe_A 197 AQPGRRKVLEG-LQYPFAVTSYGKNLYYTDWKTNSVIAMDLAISKEMDTFHPHKQTRLYGITIALSQ 262 (267)
T ss_dssp TEEEEEEEEEC-CCSEEEEEEETTEEEEEETTTTEEEEEETTTTEEEEEECCSSCCCCCCEEEECSC
T ss_pred CCCceEEEecC-CCCceEEEEeCCEEEEEECCCCeEEEEeCCCCCceEEEccccccccceeeecCcc
Confidence 75443333332 234467777666555554 56899999977653 232221 135667777665
No 249
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.97 E-value=0.0003 Score=77.79 Aligned_cols=170 Identities=10% Similarity=0.076 Sum_probs=112.2
Q ss_pred CCcEEEEECCCcEEEEcCCC--------CC-----------------CCCCCCEEEEEECCCeEEEEECCCCeEEEEEcc
Q psy7057 23 DGCILSASRDKSAKLWKPND--------LS-----------------PGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQ 77 (557)
Q Consensus 23 dg~l~sgs~Dg~V~iWd~~~--------~~-----------------~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~ 77 (557)
++.++.++.++.|.-+|..+ .. +.-.+..++.++.|+.|..+|..+|+.+..+..
T Consensus 66 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~l~alD~~tG~~~W~~~~ 145 (668)
T 1kv9_A 66 DGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTLDGRLIALDAKTGKAIWSQQT 145 (668)
T ss_dssp TTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred CCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcCCCEEEEEECCCCCEeeeecc
Confidence 45677788888888888765 00 001256788999999999999999999887764
Q ss_pred cC----CcEEEEEEcCCCEEEEEEC------CCeEEEEe-CCCcEEEEEeCC---CC-----------------------
Q psy7057 78 HE----MAVWGVIQLANGIIVTGCA------DKTIKLHS-EEGEFLKTLTGH---TD----------------------- 120 (557)
Q Consensus 78 h~----~~V~~l~~~~~~~l~sgs~------dg~I~vwd-~~~~~~~~l~~h---~~----------------------- 120 (557)
.. ..+.+.-...++.++.++. ++.|..+| .+|+.+..+... ..
T Consensus 146 ~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~ 225 (668)
T 1kv9_A 146 TDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKL 225 (668)
T ss_dssp SCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHH
T ss_pred CCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccceeee
Confidence 21 1111100012566666543 58999999 688888776521 00
Q ss_pred -----CEEEEEEeCC-CeEEEEECCC-------------------eEEEEECCCCeEEEEEeC--CC-------CcE--E
Q psy7057 121 -----CVRGLAVLND-TDFVSCSNDA-------------------SIRVWDSTTGKCVHTMYG--HP-------NFI--Y 164 (557)
Q Consensus 121 -----~V~~l~~~~~-~~lvs~s~Dg-------------------~I~vwd~~~~~~~~~~~~--h~-------~~V--~ 164 (557)
....+++.++ +.++.++.++ .|..+|..+|+.+-.++. |. ... .
T Consensus 226 ~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~ 305 (668)
T 1kv9_A 226 GGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLA 305 (668)
T ss_dssp CEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEE
T ss_pred CCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEE
Confidence 1123577776 4555666655 499999999999988864 22 222 2
Q ss_pred EEEEcCC---EEEEEeCCCeEEEEECCCCce
Q psy7057 165 SVAAHGD---LITSGGEDQCVCVYQNKAQNS 192 (557)
Q Consensus 165 ~l~~~~~---~l~s~s~Dg~I~iwd~~~~~~ 192 (557)
.+.++++ .++.++.+|.++++|..+.+.
T Consensus 306 d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~ 336 (668)
T 1kv9_A 306 ELNIDGKPRKVLMQAPKNGFFYVLDRTNGKL 336 (668)
T ss_dssp EEEETTEEEEEEEECCTTSEEEEEETTTCCE
T ss_pred EeccCCcEEEEEEEECCCCEEEEEECCCCCE
Confidence 3344665 688999999999999776643
No 250
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.97 E-value=0.00088 Score=64.33 Aligned_cols=186 Identities=7% Similarity=-0.048 Sum_probs=123.4
Q ss_pred EEEEEcccC--CcEEEEEEcCCCEEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeCCCeEEEEECCCeEEEEEC
Q psy7057 71 CKLTIRQHE--MAVWGVIQLANGIIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDS 147 (557)
Q Consensus 71 ~~~~l~~h~--~~V~~l~~~~~~~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~~~~lvs~s~Dg~I~vwd~ 147 (557)
.+.++ .|. .....+.|..+.++++.+.++.|+++| .+++.+..+.....---.+++..+..+++.-.++.+.++|.
T Consensus 45 Vv~~~-phd~~~ftqGL~~~~~~Ly~stG~~g~v~~iD~~Tgkv~~~~l~~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~ 123 (268)
T 3nok_A 45 IIREY-PHATNAFTQGLVFHQGHFFESTGHQGTLRQLSLESAQPVWMERLGNIFAEGLASDGERLYQLTWTEGLLFTWSG 123 (268)
T ss_dssp EEEEE-ECCTTCCEEEEEEETTEEEEEETTTTEEEECCSSCSSCSEEEECTTCCEEEEEECSSCEEEEESSSCEEEEEET
T ss_pred EEEEE-cCCCccccceEEEECCEEEEEcCCCCEEEEEECCCCcEEeEECCCCcceeEEEEeCCEEEEEEccCCEEEEEEC
Confidence 44445 353 455788888544888888999999999 56666666522111223466655444556667899999999
Q ss_pred CCCeEEEEEeCCCCcEEEEEEcCCEEEEEeCCCeEEEEECCCCc---eEee--CC---ccEEEEEEcCCCcEEEEE-cCC
Q psy7057 148 TTGKCVHTMYGHPNFIYSVAAHGDLITSGGEDQCVCVYQNKAQN---SFMI--PA---MSVWAVAILPNSDIVTGS-SDG 218 (557)
Q Consensus 148 ~~~~~~~~~~~h~~~V~~l~~~~~~l~s~s~Dg~I~iwd~~~~~---~~~~--~~---~~v~~v~~~p~g~l~sg~-~Dg 218 (557)
.+.+.+.++... ..-+.++.++..|+.+..++.|.++|..+.+ .+.. .. ..++.+.+. +|++.+.. .+.
T Consensus 124 ~Tl~~~~ti~~~-~eGwGLt~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~ 201 (268)
T 3nok_A 124 MPPQRERTTRYS-GEGWGLCYWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYANIWHSS 201 (268)
T ss_dssp TTTEEEEEEECS-SCCCCEEEETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTCS
T ss_pred CcCcEEEEEeCC-CceeEEecCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEEECCCC
Confidence 999999999853 3346788888888877779999999977662 2222 11 245667776 77755555 578
Q ss_pred cEEEEecCCCCcchhHHHh-----------cccceeEEEeccCCCceeEEEE
Q psy7057 219 IVRVFSANPDRQAEDAVQA-----------QYAEEVKKLKSANEQEIGGVKV 259 (557)
Q Consensus 219 ~I~iwd~~~~~~~~~~~~~-----------~~~~~v~~l~~~~~~~~~~vs~ 259 (557)
.|.+.|..+++........ ........+++.+.....++||
T Consensus 202 ~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 202 DVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp EEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred eEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 9999999988764322111 1123456677776666666665
No 251
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.95 E-value=0.0014 Score=62.87 Aligned_cols=165 Identities=9% Similarity=-0.007 Sum_probs=106.6
Q ss_pred CCEEEEEECCC--eEEEEECCCCeEEEEEcccCCc-EEEEEEcCCCEEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEE
Q psy7057 49 VNTLLSASWDM--TAKLWCLESQQCKLTIRQHEMA-VWGVIQLANGIIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRG 124 (557)
Q Consensus 49 ~~~l~sgs~Dg--~i~iwd~~~~~~~~~l~~h~~~-V~~l~~~~~~~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~ 124 (557)
+.++.+.+.+| .|+++|+++++.+..+...... --.++...+.+.++.-.++.+.++| .+.+.+.++.-.. .=+.
T Consensus 53 ~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~~~~ti~~~~-eG~g 131 (262)
T 3nol_A 53 GYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLRQVRSFNYDG-EGWG 131 (262)
T ss_dssp TEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETTTCCEEEEEECSS-CCCC
T ss_pred CEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEeeCCEEEEEECccCcEEEEEECCC-CceE
Confidence 44555666655 8999999999988877644322 2345554444555555688999999 5678888776432 2234
Q ss_pred EEEeCCCeEEEEECCCeEEEEECCCCeEEEEEeCC--C---CcEEEEEE-cCCEEEEEeCCCeEEEEECCCCc---eEee
Q psy7057 125 LAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMYGH--P---NFIYSVAA-HGDLITSGGEDQCVCVYQNKAQN---SFMI 195 (557)
Q Consensus 125 l~~~~~~~lvs~s~Dg~I~vwd~~~~~~~~~~~~h--~---~~V~~l~~-~~~~l~s~s~Dg~I~iwd~~~~~---~~~~ 195 (557)
++.. ...++.+..+++|.++|..+.+.+.++.-. . ..+..+.+ +|..++..-.+..|.+.|..+.+ .+..
T Consensus 132 lt~d-g~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~~G~lyan~w~~~~I~vIDp~tG~V~~~Id~ 210 (262)
T 3nol_A 132 LTHN-DQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWVDGEIFANVWQTNKIVRIDPETGKVTGIIDL 210 (262)
T ss_dssp EEEC-SSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEETTEEEEEETTSSEEEEECTTTCBEEEEEEC
T ss_pred EecC-CCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEECCEEEEEEccCCeEEEEECCCCcEEEEEEC
Confidence 4432 244555555788999999999988887532 1 33445666 66555555568899999977662 2222
Q ss_pred C------------CccEEEEEEcCCCc-EEEEE
Q psy7057 196 P------------AMSVWAVAILPNSD-IVTGS 215 (557)
Q Consensus 196 ~------------~~~v~~v~~~p~g~-l~sg~ 215 (557)
. ....+.+|++|+++ |++.|
T Consensus 211 ~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTG 243 (262)
T 3nol_A 211 NGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTG 243 (262)
T ss_dssp TTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEE
T ss_pred CcCccccccccCcCCceEEEEEcCCCCEEEEEC
Confidence 1 23568999999887 54444
No 252
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.95 E-value=0.002 Score=63.92 Aligned_cols=186 Identities=9% Similarity=0.005 Sum_probs=106.8
Q ss_pred cEEEEEEcC-CCEEEEEECCCeEEEEeCCCcEEEEEeCC-----CCCEEEEEEeC-CCeEEEEEC---------------
Q psy7057 81 AVWGVIQLA-NGIIVTGCADKTIKLHSEEGEFLKTLTGH-----TDCVRGLAVLN-DTDFVSCSN--------------- 138 (557)
Q Consensus 81 ~V~~l~~~~-~~~l~sgs~dg~I~vwd~~~~~~~~l~~h-----~~~V~~l~~~~-~~~lvs~s~--------------- 138 (557)
.+.++++.+ ++.|+.+...+.|..+|..+..+..+... ......+++.+ ++.+..+..
T Consensus 81 ~p~gi~~~~~~g~l~v~d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~ 160 (322)
T 2fp8_A 81 RTYDISYNLQNNQLYIVDCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDT 160 (322)
T ss_dssp CEEEEEEETTTTEEEEEETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHH
T ss_pred CCceEEEcCCCCcEEEEECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcc
Confidence 578899997 77777776667788888665444333211 13478899999 888664432
Q ss_pred ---CCeEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEE-eCCCeEEEEECCCC-----ceEeeCCccEEEEEEcC
Q psy7057 139 ---DASIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSG-GEDQCVCVYQNKAQ-----NSFMIPAMSVWAVAILP 207 (557)
Q Consensus 139 ---Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~-s~Dg~I~iwd~~~~-----~~~~~~~~~v~~v~~~p 207 (557)
++.|..+|..+++....... -.....|++ +++.|+.+ +..+.|.+|+.... ..+..... ...+++.+
T Consensus 161 ~~~~g~v~~~d~~~~~~~~~~~~-~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~ 238 (322)
T 2fp8_A 161 SDKTGRLIKYDPSTKETTLLLKE-LHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNA 238 (322)
T ss_dssp TCCCEEEEEEETTTTEEEEEEEE-ESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECT
T ss_pred cCCCceEEEEeCCCCEEEEeccC-CccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECC
Confidence 36788899776664332221 122345677 56655544 56689999996531 22222223 77899999
Q ss_pred CCcEEEEEc-----------CCcEEEEecCCCCcchhHHHh-cc-cceeEEEeccCCCceeEEEEeCCCcEEEEecC
Q psy7057 208 NSDIVTGSS-----------DGIVRVFSANPDRQAEDAVQA-QY-AEEVKKLKSANEQEIGGVKVSDDGIVRVFSAN 271 (557)
Q Consensus 208 ~g~l~sg~~-----------Dg~I~iwd~~~~~~~~~~~~~-~~-~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~ 271 (557)
+|.+.++.. .+.|..++... +........ .. ...+..+.. ......++....+.|.++++.
T Consensus 239 ~G~l~va~~~~~~~~~~~~~~~~v~~~d~~G-~~~~~~~~~~g~~~~~~~~~~~--~~g~L~v~~~~~~~i~~~~~~ 312 (322)
T 2fp8_A 239 DGHFWVSSSEELDGNMHGRVDPKGIKFDEFG-NILEVIPLPPPFAGEHFEQIQE--HDGLLYIGTLFHGSVGILVYD 312 (322)
T ss_dssp TSCEEEEEEEETTSSTTSCEEEEEEEECTTS-CEEEEEECCTTTTTSCCCEEEE--ETTEEEEECSSCSEEEEEEC-
T ss_pred CCCEEEEecCcccccccCCCccEEEEECCCC-CEEEEEECCCCCccccceEEEE--eCCEEEEeecCCCceEEEecc
Confidence 998554443 35677777542 222111110 00 112223322 233344555677788888765
No 253
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.94 E-value=0.0012 Score=65.45 Aligned_cols=212 Identities=11% Similarity=0.051 Sum_probs=125.3
Q ss_pred ccEEEEEEcCCCc-EEEEECCCcEEEEcCCC--C---------------------------------CCCCCCCEEEEEE
Q psy7057 13 MDVRSLSVTPDGC-ILSASRDKSAKLWKPND--L---------------------------------SPGAKVNTLLSAS 56 (557)
Q Consensus 13 ~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~--~---------------------------------~~~~~~~~l~sgs 56 (557)
..-.++++.++|. ++++..++.|..|+... + .+++....|+.+.
T Consensus 19 ~~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d 98 (322)
T 2fp8_A 19 YAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVD 98 (322)
T ss_dssp SCCCCEECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEE
T ss_pred CCceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEE
Confidence 3456788999998 88888899999998754 1 1222234566666
Q ss_pred CCCeEEEEECCCCeEEEEEcc-----cCCcEEEEEEcC-CCEEEEEEC------------------CCeEEEEeCCCcEE
Q psy7057 57 WDMTAKLWCLESQQCKLTIRQ-----HEMAVWGVIQLA-NGIIVTGCA------------------DKTIKLHSEEGEFL 112 (557)
Q Consensus 57 ~Dg~i~iwd~~~~~~~~~l~~-----h~~~V~~l~~~~-~~~l~sgs~------------------dg~I~vwd~~~~~~ 112 (557)
..+.+..++..++.. ..+.. .......+++.+ +|.|..+.. ++.|..+|..+..+
T Consensus 99 ~~~~i~~~d~~~g~~-~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~ 177 (322)
T 2fp8_A 99 CYYHLSVVGSEGGHA-TQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKET 177 (322)
T ss_dssp TTTEEEEECTTCEEC-EEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEE
T ss_pred CCCCEEEEeCCCCEE-EEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEE
Confidence 566677888765432 22211 123578899999 884444432 36688888654333
Q ss_pred EEEeCCCCCEEEEEEeCCCe-EE-EEECCCeEEEEECCCCe--EEEEEeCCCCcEEEEEE--cCCEEEEEeC--------
Q psy7057 113 KTLTGHTDCVRGLAVLNDTD-FV-SCSNDASIRVWDSTTGK--CVHTMYGHPNFIYSVAA--HGDLITSGGE-------- 178 (557)
Q Consensus 113 ~~l~~h~~~V~~l~~~~~~~-lv-s~s~Dg~I~vwd~~~~~--~~~~~~~h~~~V~~l~~--~~~~l~s~s~-------- 178 (557)
..+...-.....|++++++. ++ +-+..+.|.++++.... ....+....+ ...+++ +|+++++...
T Consensus 178 ~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~l~va~~~~~~~~~~~ 256 (322)
T 2fp8_A 178 TLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHFWVSSSEELDGNMHG 256 (322)
T ss_dssp EEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSCEEEEEEEETTSSTTS
T ss_pred EEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCCCEEEEecCcccccccC
Confidence 33322223456789999975 44 44566899999986421 1112211223 667777 5666555544
Q ss_pred --CCeEEEEECCCC--ceEeeCC----ccEEEEEEcCCCcEE-EEEcCCcEEEEecCC
Q psy7057 179 --DQCVCVYQNKAQ--NSFMIPA----MSVWAVAILPNSDIV-TGSSDGIVRVFSANP 227 (557)
Q Consensus 179 --Dg~I~iwd~~~~--~~~~~~~----~~v~~v~~~p~g~l~-sg~~Dg~I~iwd~~~ 227 (557)
.+.|..+|.... ..+..+. ..+.++++ .++.|+ +....+.|.++++..
T Consensus 257 ~~~~~v~~~d~~G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~~~ 313 (322)
T 2fp8_A 257 RVDPKGIKFDEFGNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGILVYDK 313 (322)
T ss_dssp CEEEEEEEECTTSCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEEEC--
T ss_pred CCccEEEEECCCCCEEEEEECCCCCccccceEEEE-eCCEEEEeecCCCceEEEeccc
Confidence 466888885432 3333332 24556665 456644 444678888888754
No 254
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=97.93 E-value=0.0039 Score=59.86 Aligned_cols=186 Identities=10% Similarity=-0.016 Sum_probs=113.3
Q ss_pred CCCCCCCCEEEEE-ECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCC-C-EEEEEECCCeEEEEeCCCcEEEEEeC-C
Q psy7057 43 LSPGAKVNTLLSA-SWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLAN-G-IIVTGCADKTIKLHSEEGEFLKTLTG-H 118 (557)
Q Consensus 43 ~~~~~~~~~l~sg-s~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~-~-~l~sgs~dg~I~vwd~~~~~~~~l~~-h 118 (557)
+.+++.++.|+.+ ...+.|..+++........+.........+++.++ + ++++-...+.|.+++.++.....+.. .
T Consensus 41 i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~ 120 (267)
T 1npe_A 41 LAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTG 120 (267)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSS
T ss_pred EEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECC
Confidence 3444445555544 45689999998765543333333357789999985 4 45555567889999977654444332 2
Q ss_pred CCCEEEEEEeCC-CeEEEEEC---CCeEEEEECCCCeEEEEEe-CCCCcEEEEEEc--CCEE-EEEeCCCeEEEEECCCC
Q psy7057 119 TDCVRGLAVLND-TDFVSCSN---DASIRVWDSTTGKCVHTMY-GHPNFIYSVAAH--GDLI-TSGGEDQCVCVYQNKAQ 190 (557)
Q Consensus 119 ~~~V~~l~~~~~-~~lvs~s~---Dg~I~vwd~~~~~~~~~~~-~h~~~V~~l~~~--~~~l-~s~s~Dg~I~iwd~~~~ 190 (557)
......++++|+ +.+..+.. .+.|..+++.. +....+. ..-.....++++ +..| ++-...+.|.+++....
T Consensus 121 ~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg-~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~ 199 (267)
T 1npe_A 121 LVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDG-TNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQP 199 (267)
T ss_dssp CSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTS-CCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEE
T ss_pred CCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCC-CCcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCC
Confidence 256789999995 66554443 36888888753 3233332 233456788883 4554 55556789999997644
Q ss_pred --ceEeeCCccEEEEEEcCCCcEE-EEEcCCcEEEEecCCCCc
Q psy7057 191 --NSFMIPAMSVWAVAILPNSDIV-TGSSDGIVRVFSANPDRQ 230 (557)
Q Consensus 191 --~~~~~~~~~v~~v~~~p~g~l~-sg~~Dg~I~iwd~~~~~~ 230 (557)
..+.........+++. .+.++ +....+.|.+++..+++.
T Consensus 200 ~~~~~~~~~~~P~gi~~d-~~~lyva~~~~~~v~~~d~~~g~~ 241 (267)
T 1npe_A 200 GRRKVLEGLQYPFAVTSY-GKNLYYTDWKTNSVIAMDLAISKE 241 (267)
T ss_dssp EEEEEEECCCSEEEEEEE-TTEEEEEETTTTEEEEEETTTTEE
T ss_pred ceEEEecCCCCceEEEEe-CCEEEEEECCCCeEEEEeCCCCCc
Confidence 2222222334566664 34444 444568899998876543
No 255
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.90 E-value=0.0014 Score=62.88 Aligned_cols=185 Identities=9% Similarity=0.052 Sum_probs=119.6
Q ss_pred EEEEEcccC--CcEEEEEEcCCC-EEEEEECCC--eEEEEe-CCCcEEEEEeCCCCC-EEEEEEeCCCeEEEEECCCeEE
Q psy7057 71 CKLTIRQHE--MAVWGVIQLANG-IIVTGCADK--TIKLHS-EEGEFLKTLTGHTDC-VRGLAVLNDTDFVSCSNDASIR 143 (557)
Q Consensus 71 ~~~~l~~h~--~~V~~l~~~~~~-~l~sgs~dg--~I~vwd-~~~~~~~~l~~h~~~-V~~l~~~~~~~lvs~s~Dg~I~ 143 (557)
.+.++ .|. .....+.|+ ++ ++.+.+.+| .|+++| .+++.+..+.-.... --.+++..+..+++.-.++.+.
T Consensus 33 vv~~~-phd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~~~v~ 110 (262)
T 3nol_A 33 IVHSY-PHDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWKNGLGF 110 (262)
T ss_dssp EEEEE-ECCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEE
T ss_pred EEEEe-cCCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEeeCCEEE
Confidence 44555 354 445788888 56 677777766 899999 577777776543322 2335555433344555689999
Q ss_pred EEECCCCeEEEEEeCCCCcEEEEEEcCCEEEEEeCCCeEEEEECCCC---ceEeeC--C---ccEEEEEEcCCCcEEEEE
Q psy7057 144 VWDSTTGKCVHTMYGHPNFIYSVAAHGDLITSGGEDQCVCVYQNKAQ---NSFMIP--A---MSVWAVAILPNSDIVTGS 215 (557)
Q Consensus 144 vwd~~~~~~~~~~~~h~~~V~~l~~~~~~l~s~s~Dg~I~iwd~~~~---~~~~~~--~---~~v~~v~~~p~g~l~sg~ 215 (557)
++|..+.+.+.++.... .-+.++.++..|+.+..++.|.++|..+. ..+... . ..++.+.+. +|++.+..
T Consensus 111 v~D~~t~~~~~ti~~~~-eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~ 188 (262)
T 3nol_A 111 VWNIRNLRQVRSFNYDG-EGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFANV 188 (262)
T ss_dssp EEETTTCCEEEEEECSS-CCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEE
T ss_pred EEECccCcEEEEEECCC-CceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEEE
Confidence 99999999999997433 33677788887777666888999997766 233221 1 234556776 67755555
Q ss_pred -cCCcEEEEecCCCCcchhHHHhcc----------cceeEEEeccCCCceeEEEE
Q psy7057 216 -SDGIVRVFSANPDRQAEDAVQAQY----------AEEVKKLKSANEQEIGGVKV 259 (557)
Q Consensus 216 -~Dg~I~iwd~~~~~~~~~~~~~~~----------~~~v~~l~~~~~~~~~~vs~ 259 (557)
.++.|.+.|..+++.......... ......+++.+.....+++|
T Consensus 189 w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTG 243 (262)
T 3nol_A 189 WQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTG 243 (262)
T ss_dssp TTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEE
T ss_pred ccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEEC
Confidence 588899999988876433222111 12345666666666555655
No 256
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.87 E-value=0.0016 Score=70.51 Aligned_cols=168 Identities=9% Similarity=0.050 Sum_probs=105.3
Q ss_pred CCcEEEEEC-CCcEEEEcC-CC--------CC-----------------CCCCCCEEEEEECCCeEEEEECCCCeEEEEE
Q psy7057 23 DGCILSASR-DKSAKLWKP-ND--------LS-----------------PGAKVNTLLSASWDMTAKLWCLESQQCKLTI 75 (557)
Q Consensus 23 dg~l~sgs~-Dg~V~iWd~-~~--------~~-----------------~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l 75 (557)
++.++.++. ++.|.-+|. .+ +. +.-.+..++.++.|+.+..+|..+|+.+...
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~l~alD~~tG~~~W~~ 141 (571)
T 2ad6_A 62 GDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQANGHLLALDAKTGKINWEV 141 (571)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEECCEEEEEeCCCEEEEEECCCCCEEEEe
Confidence 455666666 777777777 44 10 0012567888999999999999999988776
Q ss_pred cccC----CcEEEEEEcCCCEEEEEEC------CCeEEEEe-CCCcEEEEEeCCCCC-----------------------
Q psy7057 76 RQHE----MAVWGVIQLANGIIVTGCA------DKTIKLHS-EEGEFLKTLTGHTDC----------------------- 121 (557)
Q Consensus 76 ~~h~----~~V~~l~~~~~~~l~sgs~------dg~I~vwd-~~~~~~~~l~~h~~~----------------------- 121 (557)
.... ..+.+--...++.++.++. ++.|..+| .+|+.+.++......
T Consensus 142 ~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~ 221 (571)
T 2ad6_A 142 EVCDPKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQFGLGT 221 (571)
T ss_dssp ECCCGGGTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCSSHHH
T ss_pred cCCCCCccceeccCCEEECCEEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCccccccCccccccccccccccccc
Confidence 5321 0121100012566666665 78999999 578887776532110
Q ss_pred --------------E-EEEEEeCC-CeEEEEECC----------------CeEEEEECCCCeEEEEEeCC--C-------
Q psy7057 122 --------------V-RGLAVLND-TDFVSCSND----------------ASIRVWDSTTGKCVHTMYGH--P------- 160 (557)
Q Consensus 122 --------------V-~~l~~~~~-~~lvs~s~D----------------g~I~vwd~~~~~~~~~~~~h--~------- 160 (557)
+ ..+++.++ +.++.++.+ +.|..+|..+|+.+-.++.. .
T Consensus 222 ~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~ 301 (571)
T 2ad6_A 222 KTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGV 301 (571)
T ss_dssp HTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCC
T ss_pred ccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcccccccC
Confidence 0 12455554 455444432 36999999999998887632 1
Q ss_pred -CcEE-EEEEcCC---EEEEEeCCCeEEEEECCCC
Q psy7057 161 -NFIY-SVAAHGD---LITSGGEDQCVCVYQNKAQ 190 (557)
Q Consensus 161 -~~V~-~l~~~~~---~l~s~s~Dg~I~iwd~~~~ 190 (557)
.++. ....+++ .++.++.+|.++++|..+.
T Consensus 302 ~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG 336 (571)
T 2ad6_A 302 NQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENG 336 (571)
T ss_dssp CCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTC
T ss_pred CCCEEEecccCCcEEEEEEEeCCCcEEEEEECCCC
Confidence 2222 2222563 5778889999999997665
No 257
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.86 E-value=0.0083 Score=56.90 Aligned_cols=155 Identities=10% Similarity=-0.003 Sum_probs=101.4
Q ss_pred CeEEEEECCCCeEEEEEcccCC-cEEEEEEcCCCEEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeCCCeEEEE
Q psy7057 59 MTAKLWCLESQQCKLTIRQHEM-AVWGVIQLANGIIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDTDFVSC 136 (557)
Q Consensus 59 g~i~iwd~~~~~~~~~l~~h~~-~V~~l~~~~~~~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~~~~lvs~ 136 (557)
..|+.+|+.+++.+..+..... .--.++...+.+.+..-.++.+.++| .+.+.+.++.... .-+.++.. .+.|+.+
T Consensus 43 S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~tl~~~~ti~~~~-~Gwglt~d-g~~L~vS 120 (243)
T 3mbr_X 43 SSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRNHEGFVYDLATLTPRARFRYPG-EGWALTSD-DSHLYMS 120 (243)
T ss_dssp CEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETTTTEEEEEEECSS-CCCEEEEC-SSCEEEE
T ss_pred ceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeCCEEEEEECCcCcEEEEEeCCC-CceEEeeC-CCEEEEE
Confidence 4788888888888877754332 22345555444555566789999999 5677787776433 23555543 3446655
Q ss_pred ECCCeEEEEECCCCeEEEEEeCC--C---CcEEEEEE-cCCEEEEEeCCCeEEEEECCCCce---Eee------------
Q psy7057 137 SNDASIRVWDSTTGKCVHTMYGH--P---NFIYSVAA-HGDLITSGGEDQCVCVYQNKAQNS---FMI------------ 195 (557)
Q Consensus 137 s~Dg~I~vwd~~~~~~~~~~~~h--~---~~V~~l~~-~~~~l~s~s~Dg~I~iwd~~~~~~---~~~------------ 195 (557)
..++.|.++|..+.+.+.++.-. . ..+..+.+ ++..++..-.+..|.+.|..+.+. +..
T Consensus 121 dgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~ 200 (243)
T 3mbr_X 121 DGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWVNGELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTD 200 (243)
T ss_dssp CSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCC
T ss_pred CCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEeCCEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccC
Confidence 56889999999999988887632 1 34556677 565555555677899999776622 221
Q ss_pred -CCccEEEEEEcCCCc-EEEEE
Q psy7057 196 -PAMSVWAVAILPNSD-IVTGS 215 (557)
Q Consensus 196 -~~~~v~~v~~~p~g~-l~sg~ 215 (557)
.....+.+++.|+++ |++.+
T Consensus 201 ~~~~vlNGIA~d~~~~~lfVTG 222 (243)
T 3mbr_X 201 STNDVLNGIAFDAEHDRLFVTG 222 (243)
T ss_dssp TTSSCEEEEEEETTTTEEEEEE
T ss_pred CcCCceEEEEEcCCCCEEEEEC
Confidence 123568999999877 44443
No 258
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=97.85 E-value=0.0017 Score=67.22 Aligned_cols=193 Identities=11% Similarity=0.041 Sum_probs=124.2
Q ss_pred CCCc--EEEEECCCcEEEEcCCC---------------------------CCCCCCCCEEEEEECC------CeEEEEEC
Q psy7057 22 PDGC--ILSASRDKSAKLWKPND---------------------------LSPGAKVNTLLSASWD------MTAKLWCL 66 (557)
Q Consensus 22 pdg~--l~sgs~Dg~V~iWd~~~---------------------------~~~~~~~~~l~sgs~D------g~i~iwd~ 66 (557)
++++ ++++-.+++|.+.|+.+ +...+++ .++++..+ +.+.+.|.
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~ 171 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDH 171 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECT
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEEC
Confidence 7776 55778899999999863 2344667 77776665 78999999
Q ss_pred CCCeEEEEEcccCC---cEEEEEEcCCC-EEEEEE-------------------CCCeEEEEeC-CCcEEEEEeCC--CC
Q psy7057 67 ESQQCKLTIRQHEM---AVWGVIQLANG-IIVTGC-------------------ADKTIKLHSE-EGEFLKTLTGH--TD 120 (557)
Q Consensus 67 ~~~~~~~~l~~h~~---~V~~l~~~~~~-~l~sgs-------------------~dg~I~vwd~-~~~~~~~l~~h--~~ 120 (557)
++.+.+.++..... .-..+.|+|++ .+++.. .+.+|.+||. +++.+.++..- ..
T Consensus 172 ~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~ 251 (462)
T 2ece_A 172 YSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENR 251 (462)
T ss_dssp TTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEE
T ss_pred CCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCC
Confidence 99999988863322 23347788988 666664 2689999995 45566666542 23
Q ss_pred CEEEEEE--eCCCe--EEEEE-----CCCeEEEEECCCCe--EEEEE--eCC----------------CCcEEEEEE--c
Q psy7057 121 CVRGLAV--LNDTD--FVSCS-----NDASIRVWDSTTGK--CVHTM--YGH----------------PNFIYSVAA--H 169 (557)
Q Consensus 121 ~V~~l~~--~~~~~--lvs~s-----~Dg~I~vwd~~~~~--~~~~~--~~h----------------~~~V~~l~~--~ 169 (557)
....+.| +|+++ ++++- .+++|.+|....++ .++.+ ... ......|.+ +
T Consensus 252 ~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~D 331 (462)
T 2ece_A 252 MALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLD 331 (462)
T ss_dssp EEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTT
T ss_pred ccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCC
Confidence 4556666 88887 44555 67788877654443 22221 110 123455555 7
Q ss_pred CCEEEEEe-CCCeEEEEECCCC------ceEeeCC--------------ccEEEEEEcCCCc-EEEEE
Q psy7057 170 GDLITSGG-EDQCVCVYQNKAQ------NSFMIPA--------------MSVWAVAILPNSD-IVTGS 215 (557)
Q Consensus 170 ~~~l~s~s-~Dg~I~iwd~~~~------~~~~~~~--------------~~v~~v~~~p~g~-l~sg~ 215 (557)
+++|.++. ..+.|.+||+... ..+.... ..-..++++|+|+ ++++.
T Consensus 332 GrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 332 DKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp SCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred CCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 88766555 5789999996422 1221110 1357899999998 55555
No 259
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.82 E-value=0.0053 Score=58.26 Aligned_cols=187 Identities=8% Similarity=0.010 Sum_probs=120.9
Q ss_pred eEEEEEccc--CCcEEEEEEcCCCEEEEEECCC--eEEEEe-CCCcEEEEEeCCCCC-EEEEEEeCCCeEEEEECCCeEE
Q psy7057 70 QCKLTIRQH--EMAVWGVIQLANGIIVTGCADK--TIKLHS-EEGEFLKTLTGHTDC-VRGLAVLNDTDFVSCSNDASIR 143 (557)
Q Consensus 70 ~~~~~l~~h--~~~V~~l~~~~~~~l~sgs~dg--~I~vwd-~~~~~~~~l~~h~~~-V~~l~~~~~~~lvs~s~Dg~I~ 143 (557)
+.+.++ .| ......+.|+++.++.+.+.+| .|+.+| .+++.+....-.... --.+++..+..++..-.++.+.
T Consensus 10 ~v~~~~-phd~~~ftqGL~~~~~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~~~v~ 88 (243)
T 3mbr_X 10 RVVKRY-PHDTTAFTEGLFYLRGHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRNHEGF 88 (243)
T ss_dssp EEEEEE-ECCTTCCEEEEEEETTEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEE
T ss_pred EEEEEc-CCCCccccccEEEECCEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeCCEEE
Confidence 344555 45 3567789998744677777654 899999 577777776533322 2345555433355666789999
Q ss_pred EEECCCCeEEEEEeCCCCcEEEEEEcCCEEEEEeCCCeEEEEECCCC---ceEeeC--C---ccEEEEEEcCCCcEEEEE
Q psy7057 144 VWDSTTGKCVHTMYGHPNFIYSVAAHGDLITSGGEDQCVCVYQNKAQ---NSFMIP--A---MSVWAVAILPNSDIVTGS 215 (557)
Q Consensus 144 vwd~~~~~~~~~~~~h~~~V~~l~~~~~~l~s~s~Dg~I~iwd~~~~---~~~~~~--~---~~v~~v~~~p~g~l~sg~ 215 (557)
++|..+.+.+.++... ..-+.++.++..|+.+..++.|.++|..+. .++... . ..++.+.+. +|++.+..
T Consensus 89 v~D~~tl~~~~ti~~~-~~Gwglt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanv 166 (243)
T 3mbr_X 89 VYDLATLTPRARFRYP-GEGWALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLANV 166 (243)
T ss_dssp EEETTTTEEEEEEECS-SCCCEEEECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEE
T ss_pred EEECCcCcEEEEEeCC-CCceEEeeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEEEEE
Confidence 9999999999999843 334688887777776667899999997766 233221 1 244556655 67755555
Q ss_pred -cCCcEEEEecCCCCcchhHHHhc-----------ccceeEEEeccCCCceeEEEE
Q psy7057 216 -SDGIVRVFSANPDRQAEDAVQAQ-----------YAEEVKKLKSANEQEIGGVKV 259 (557)
Q Consensus 216 -~Dg~I~iwd~~~~~~~~~~~~~~-----------~~~~v~~l~~~~~~~~~~vs~ 259 (557)
.+..|.+.|..+++......... .......+++.+.....++||
T Consensus 167 w~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTG 222 (243)
T 3mbr_X 167 WLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTG 222 (243)
T ss_dssp TTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEE
T ss_pred CCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEEC
Confidence 57889999998887653322211 112445666666655555665
No 260
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.75 E-value=0.0026 Score=61.10 Aligned_cols=165 Identities=13% Similarity=0.042 Sum_probs=110.4
Q ss_pred CCEEEEEECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCCCEEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEEE
Q psy7057 49 VNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAV 127 (557)
Q Consensus 49 ~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~ 127 (557)
+.++++.+.+|.|+++|+++++.+..+......-..++...+.+.++.-.++.+.++| .+.+.+.++... ..-+.++.
T Consensus 65 ~~Ly~stG~~g~v~~iD~~Tgkv~~~~l~~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~~-~eGwGLt~ 143 (268)
T 3nok_A 65 GHFFESTGHQGTLRQLSLESAQPVWMERLGNIFAEGLASDGERLYQLTWTEGLLFTWSGMPPQRERTTRYS-GEGWGLCY 143 (268)
T ss_dssp TEEEEEETTTTEEEECCSSCSSCSEEEECTTCCEEEEEECSSCEEEEESSSCEEEEEETTTTEEEEEEECS-SCCCCEEE
T ss_pred CEEEEEcCCCCEEEEEECCCCcEEeEECCCCcceeEEEEeCCEEEEEEccCCEEEEEECCcCcEEEEEeCC-CceeEEec
Confidence 4566677778899999999998777662122223446666555666666789999999 567778777642 22345554
Q ss_pred eCCCeEEEEECCCeEEEEECCCCeEEEEEeC--CC---CcEEEEEE-cCCEEEEEeCCCeEEEEECCCCce---Eee---
Q psy7057 128 LNDTDFVSCSNDASIRVWDSTTGKCVHTMYG--HP---NFIYSVAA-HGDLITSGGEDQCVCVYQNKAQNS---FMI--- 195 (557)
Q Consensus 128 ~~~~~lvs~s~Dg~I~vwd~~~~~~~~~~~~--h~---~~V~~l~~-~~~~l~s~s~Dg~I~iwd~~~~~~---~~~--- 195 (557)
. ...|+.+..+++|.++|..+.+.+.++.- +. ..+..+.+ +|..++..-.+..|.+.|..+.+. +..
T Consensus 144 D-g~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L 222 (268)
T 3nok_A 144 W-NGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECANGVIYANIWHSSDVLEIDPATGTVVGVIDASAL 222 (268)
T ss_dssp E-TTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTCSEEEEECTTTCBEEEEEECHHH
T ss_pred C-CCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEeCCEEEEEECCCCeEEEEeCCCCcEEEEEECCCC
Confidence 3 24566555689999999999998888763 22 24466777 666555555678999999776622 211
Q ss_pred ----------CCccEEEEEEcCCCc-EEEEE
Q psy7057 196 ----------PAMSVWAVAILPNSD-IVTGS 215 (557)
Q Consensus 196 ----------~~~~v~~v~~~p~g~-l~sg~ 215 (557)
.....+.+++.|+++ |++.+
T Consensus 223 ~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 223 TRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp HHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred cccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 123578999999877 44443
No 261
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.70 E-value=0.0028 Score=69.93 Aligned_cols=135 Identities=7% Similarity=0.021 Sum_probs=90.1
Q ss_pred CCcEEEEECCCcEEEEcCCC--------C---------CCCC--CCCEEEEEEC------CCeEEEEECCCCeEEEEEcc
Q psy7057 23 DGCILSASRDKSAKLWKPND--------L---------SPGA--KVNTLLSASW------DMTAKLWCLESQQCKLTIRQ 77 (557)
Q Consensus 23 dg~l~sgs~Dg~V~iWd~~~--------~---------~~~~--~~~~l~sgs~------Dg~i~iwd~~~~~~~~~l~~ 77 (557)
+++++.++.|+.|..+|..+ . ...| .+..++.++. ++.|..+|..+|+.+.++..
T Consensus 117 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~ 196 (668)
T 1kv9_A 117 GDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYT 196 (668)
T ss_dssp BTEEEEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEES
T ss_pred CCEEEEEcCCCEEEEEECCCCCEeeeeccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecc
Confidence 34577888899999998876 1 0011 2355666543 58999999999999888753
Q ss_pred c--C-----------------------------CcEEEEEEcCCC-EEEEEECCC-------------------eEEEEe
Q psy7057 78 H--E-----------------------------MAVWGVIQLANG-IIVTGCADK-------------------TIKLHS 106 (557)
Q Consensus 78 h--~-----------------------------~~V~~l~~~~~~-~l~sgs~dg-------------------~I~vwd 106 (557)
. . .....+++.++. +++.++.++ .|..+|
T Consensus 197 ~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD 276 (668)
T 1kv9_A 197 VPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIR 276 (668)
T ss_dssp SCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEEC
T ss_pred cCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEc
Confidence 1 0 011235677754 777777766 388899
Q ss_pred -CCCcEEEEEeC--CC-------CCEEEEEEeCCCe----EEEEECCCeEEEEECCCCeEEEEEe
Q psy7057 107 -EEGEFLKTLTG--HT-------DCVRGLAVLNDTD----FVSCSNDASIRVWDSTTGKCVHTMY 157 (557)
Q Consensus 107 -~~~~~~~~l~~--h~-------~~V~~l~~~~~~~----lvs~s~Dg~I~vwd~~~~~~~~~~~ 157 (557)
.+|+.+..+.. |. .+.....+..++. ++.++.+|.+.++|..+|+.+....
T Consensus 277 ~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~ 341 (668)
T 1kv9_A 277 PDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEK 341 (668)
T ss_dssp TTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEE
T ss_pred CCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEecccc
Confidence 67888777763 32 2222223333553 7789999999999999999885543
No 262
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.70 E-value=0.025 Score=55.45 Aligned_cols=211 Identities=13% Similarity=0.051 Sum_probs=123.1
Q ss_pred EEEEEeccCcccEEEEEEcCCCcEEEEE-CCCcEEEEcCCC--------------CCCCCCCCEEEEEECCC--eEEEEE
Q psy7057 3 KLSTALYGHSMDVRSLSVTPDGCILSAS-RDKSAKLWKPND--------------LSPGAKVNTLLSASWDM--TAKLWC 65 (557)
Q Consensus 3 kl~~~l~gH~~~V~~l~~spdg~l~sgs-~Dg~V~iWd~~~--------------~~~~~~~~~l~sgs~Dg--~i~iwd 65 (557)
++...+..+ .....++|+++|+|+.+. .++.|..||... +.+.++++++++..... .|..++
T Consensus 23 ~~~~~~p~~-~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~~~~~~~~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d 101 (306)
T 2p4o_A 23 KIITSFPVN-TFLENLASAPDGTIFVTNHEVGEIVSITPDGNQQIHATVEGKVSGLAFTSNGDLVATGWNADSIPVVSLV 101 (306)
T ss_dssp EEEEEECTT-CCEEEEEECTTSCEEEEETTTTEEEEECTTCCEEEEEECSSEEEEEEECTTSCEEEEEECTTSCEEEEEE
T ss_pred eEeEeCCCC-CCcceEEECCCCCEEEEeCCCCeEEEECCCCceEEEEeCCCCceeEEEcCCCcEEEEeccCCcceEEEEc
Confidence 455566543 567889999999865554 788999998765 55666777665554332 466677
Q ss_pred CCCCeEEEEEc-ccCCcEEEEEEcCCCE-EEEEECCCeEEEEeCCCc--EEEEEe---------CCCCCEEEEEEeCCCe
Q psy7057 66 LESQQCKLTIR-QHEMAVWGVIQLANGI-IVTGCADKTIKLHSEEGE--FLKTLT---------GHTDCVRGLAVLNDTD 132 (557)
Q Consensus 66 ~~~~~~~~~l~-~h~~~V~~l~~~~~~~-l~sgs~dg~I~vwd~~~~--~~~~l~---------~h~~~V~~l~~~~~~~ 132 (557)
..+++...... ........++..+++. +++-..++.|.++|.... .+.... ..-.....| ++++.
T Consensus 102 ~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~ 179 (306)
T 2p4o_A 102 KSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGN 179 (306)
T ss_dssp CTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETT
T ss_pred CCCCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCC
Confidence 77776543222 1223345555566664 444445888888885432 121111 111235555 56653
Q ss_pred --EEEEECCCeEEEEECCC-CeE--EEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC-ceE---eeCCccEE
Q psy7057 133 --FVSCSNDASIRVWDSTT-GKC--VHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ-NSF---MIPAMSVW 201 (557)
Q Consensus 133 --lvs~s~Dg~I~vwd~~~-~~~--~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~-~~~---~~~~~~v~ 201 (557)
+++-+..+.|..+++.. ++. ...+.. ......+++ +|+++++....+.|.+++.... ..+ ........
T Consensus 180 ~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~-~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~G~~~~~~~~~~~~~~p~ 258 (306)
T 2p4o_A 180 FLYVSNTEKMLLLRIPVDSTDKPGEPEIFVE-QTNIDDFAFDVEGNLYGATHIYNSVVRIAPDRSTTIIAQAEQGVIGST 258 (306)
T ss_dssp EEEEEETTTTEEEEEEBCTTSCBCCCEEEEE-SCCCSSEEEBTTCCEEEECBTTCCEEEECTTCCEEEEECGGGTCTTEE
T ss_pred EEEEEeCCCCEEEEEEeCCCCCCCccEEEec-cCCCCCeEECCCCCEEEEeCCCCeEEEECCCCCEEEEeecccccCCce
Confidence 44666778999999864 321 111111 122334555 6777777677889999996532 222 12234688
Q ss_pred EEEEc---CCCc-EEEEEcC
Q psy7057 202 AVAIL---PNSD-IVTGSSD 217 (557)
Q Consensus 202 ~v~~~---p~g~-l~sg~~D 217 (557)
+++|. |++. |++++..
T Consensus 259 ~~a~~g~~~d~~~LyVt~~~ 278 (306)
T 2p4o_A 259 AVAFGQTEGDCTAIYVVTNG 278 (306)
T ss_dssp EEEECCSTTTTTEEEEEECT
T ss_pred EEEEecccCCCCEEEEECCC
Confidence 99998 7765 5544443
No 263
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.65 E-value=0.0033 Score=68.23 Aligned_cols=139 Identities=12% Similarity=0.079 Sum_probs=89.9
Q ss_pred EEEEECCCeEEEEECCCCeEEEEEcccCC----cEEEEEEcCCCEEEEEE------CCCeEEEEe-CCCcEEEEEeCCCC
Q psy7057 52 LLSASWDMTAKLWCLESQQCKLTIRQHEM----AVWGVIQLANGIIVTGC------ADKTIKLHS-EEGEFLKTLTGHTD 120 (557)
Q Consensus 52 l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~----~V~~l~~~~~~~l~sgs------~dg~I~vwd-~~~~~~~~l~~h~~ 120 (557)
|+.++.|+.+..+|..+|+.+........ .+.+--...++.++.++ .++.|+.+| .+|+.+..+.....
T Consensus 124 V~v~t~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~ 203 (599)
T 1w6s_A 124 ILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGP 203 (599)
T ss_dssp EEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSC
T ss_pred EEEEcCCCEEEEEECCCCCEEEeecCCCCCccceeecCCEEECCEEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCC
Confidence 88889999999999999998877643220 11111011256666665 389999999 67888777653221
Q ss_pred C-------------------------------------EE-EEEEeCC-CeEEEEECC----------------CeEEEE
Q psy7057 121 C-------------------------------------VR-GLAVLND-TDFVSCSND----------------ASIRVW 145 (557)
Q Consensus 121 ~-------------------------------------V~-~l~~~~~-~~lvs~s~D----------------g~I~vw 145 (557)
. ++ .+++.+. +.++.++.+ +.|.-+
T Consensus 204 ~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Al 283 (599)
T 1w6s_A 204 DKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGR 283 (599)
T ss_dssp HHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEE
T ss_pred ccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEE
Confidence 1 11 2345554 555555544 489999
Q ss_pred ECCCCeEEEEEeCCC----------CcEE-EEE-EcC---CEEEEEeCCCeEEEEECCCC
Q psy7057 146 DSTTGKCVHTMYGHP----------NFIY-SVA-AHG---DLITSGGEDQCVCVYQNKAQ 190 (557)
Q Consensus 146 d~~~~~~~~~~~~h~----------~~V~-~l~-~~~---~~l~s~s~Dg~I~iwd~~~~ 190 (557)
|..+|+.+-.++... .++. .+. .++ ..++.++.+|.++++|..+.
T Consensus 284 d~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG 343 (599)
T 1w6s_A 284 DADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDG 343 (599)
T ss_dssp ETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTC
T ss_pred eCCCCceeeEeecCCCccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEECCCC
Confidence 999999988876422 1222 222 246 46777889999999997665
No 264
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.64 E-value=0.062 Score=53.33 Aligned_cols=251 Identities=10% Similarity=0.042 Sum_probs=133.1
Q ss_pred cccEEEEEEcCCCcEEEEECCCcEEEEcCCC------CCCC---CC---------CCEEEEEECCCeEEEEECCCCeEEE
Q psy7057 12 SMDVRSLSVTPDGCILSASRDKSAKLWKPND------LSPG---AK---------VNTLLSASWDMTAKLWCLESQQCKL 73 (557)
Q Consensus 12 ~~~V~~l~~spdg~l~sgs~Dg~V~iWd~~~------~~~~---~~---------~~~l~sgs~Dg~i~iwd~~~~~~~~ 73 (557)
...+.+|.|.+++.++.++..|.|... .+. +... +. .+.++.++..+.|.. ....++.-.
T Consensus 35 ~~~~~~v~~~~~~~~~~~G~~g~i~~s-~DgG~tW~~~~~~~~~~~~~~~~i~~~~~~~~~~g~~g~i~~-S~DgG~tW~ 112 (327)
T 2xbg_A 35 TATILDMSFIDRHHGWLVGVNATLMET-RDGGQTWEPRTLVLDHSDYRFNSVSFQGNEGWIVGEPPIMLH-TTDGGQSWS 112 (327)
T ss_dssp SSCEEEEEESSSSCEEEEETTTEEEEE-SSTTSSCEECCCCCSCCCCEEEEEEEETTEEEEEEETTEEEE-ESSTTSSCE
T ss_pred CCcEEEEEECCCCcEEEEcCCCeEEEe-CCCCCCCeECCCCCCCCCccEEEEEecCCeEEEEECCCeEEE-ECCCCCCce
Confidence 457999999887775446677765432 111 1110 01 122333334443322 222222111
Q ss_pred EEc---ccCCcEEEEEEcCCCEEEEEECCCeEEEEeCCCc-EEEEEeCCCCCEEEEEEeCCCeEEEEECCCeEEE-EEC-
Q psy7057 74 TIR---QHEMAVWGVIQLANGIIVTGCADKTIKLHSEEGE-FLKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRV-WDS- 147 (557)
Q Consensus 74 ~l~---~h~~~V~~l~~~~~~~l~sgs~dg~I~vwd~~~~-~~~~l~~h~~~V~~l~~~~~~~lvs~s~Dg~I~v-wd~- 147 (557)
.+. .+...+..+.+.+++.++.++.++.|..-.-.|+ -.....++...+.++.+.+++.++..+.++.+.. +|-
T Consensus 113 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~g~v~~S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~g 192 (327)
T 2xbg_A 113 QIPLDPKLPGSPRLIKALGNGSAEMITNVGAIYRTKDSGKNWQALVQEAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPG 192 (327)
T ss_dssp ECCCCTTCSSCEEEEEEEETTEEEEEETTCCEEEESSTTSSEEEEECSCCCCEEEEEECTTSCEEEEETTSSEEEEECTT
T ss_pred ECccccCCCCCeEEEEEECCCCEEEEeCCccEEEEcCCCCCCEEeecCCCcceEEEEEcCCCcEEEEECCCcEEEEeCCC
Confidence 111 2334577788777775555556665543322232 2233345566789999999888776666666544 442
Q ss_pred -CCCeEEEEEeCCCCcEEEEEE-cCCEEEEEeCCCeEEEEECCCC---ceEeeC----CccEEEEEEcCCCcEEEEEcCC
Q psy7057 148 -TTGKCVHTMYGHPNFIYSVAA-HGDLITSGGEDQCVCVYQNKAQ---NSFMIP----AMSVWAVAILPNSDIVTGSSDG 218 (557)
Q Consensus 148 -~~~~~~~~~~~h~~~V~~l~~-~~~~l~s~s~Dg~I~iwd~~~~---~~~~~~----~~~v~~v~~~p~g~l~sg~~Dg 218 (557)
.+.+.+. ......+..+.+ ....++.++.+|.+++.+.... ..+... ...+.++++.+++.+++++.++
T Consensus 193 G~tW~~~~--~~~~~~~~~~~~~~~g~~~~~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~~g 270 (327)
T 2xbg_A 193 QTAWEPHN--RTTSRRLHNMGFTPDGRLWMIVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGGAG 270 (327)
T ss_dssp CSSCEEEE--CCSSSCEEEEEECTTSCEEEEETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEESTT
T ss_pred CCceeECC--CCCCCccceeEECCCCCEEEEeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeCCC
Confidence 3344442 245567788888 2234556677888887742212 222211 2358899999888877777788
Q ss_pred cEEEEecCCCCcchhHH-HhcccceeEEEeccCCCceeEEEEeCCCcEEEEe
Q psy7057 219 IVRVFSANPDRQAEDAV-QAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFS 269 (557)
Q Consensus 219 ~I~iwd~~~~~~~~~~~-~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~ 269 (557)
.| .+..+.++.-.... .......+..+.+.+ ...+++++.+|.|.-++
T Consensus 271 ~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~--~~~~~~~G~~G~i~~~~ 319 (327)
T 2xbg_A 271 AL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFS--PDQGFILGQKGILLRYV 319 (327)
T ss_dssp CE-EEESSTTSSCEECGGGTTSSSCCCEEEEEE--TTEEEEECSTTEEEEEC
T ss_pred eE-EEeCCCCcccEEcCccCCCCCCeEEEEEEC--CCceEEEcCCceEEEEc
Confidence 77 34444443221111 101122334444432 22367788899776665
No 265
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.47 E-value=0.016 Score=62.61 Aligned_cols=168 Identities=8% Similarity=0.082 Sum_probs=103.2
Q ss_pred CCcEEEEECCCcEEEEcCCC--------CCC---------------CCCCCEEEEEECCCeEEEEECCCCeEEEEEcccC
Q psy7057 23 DGCILSASRDKSAKLWKPND--------LSP---------------GAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHE 79 (557)
Q Consensus 23 dg~l~sgs~Dg~V~iWd~~~--------~~~---------------~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~ 79 (557)
+++++.++.++.|.-+|..+ ... .-.+..++.++.|+.|..+|..+|+.+.......
T Consensus 68 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~dg~l~AlD~~TG~~~W~~~~~~ 147 (582)
T 1flg_A 68 DGVIYVTASYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTLDASVVALNKNTGKVVWKKKFAD 147 (582)
T ss_dssp TTEEEEEETTTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEETTTEEEEEESSSCCEEEEEECSC
T ss_pred CCEEEEEcCCCCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEeCCCEEEEEECCCCCEEeeecCCC
Confidence 55666666644477777655 100 0125678899999999999999999887765432
Q ss_pred C----cEEE-EEEcCC---C--EEEEEEC------CCeEEEEe-CCCcEEEEEeCCCCCE--------------------
Q psy7057 80 M----AVWG-VIQLAN---G--IIVTGCA------DKTIKLHS-EEGEFLKTLTGHTDCV-------------------- 122 (557)
Q Consensus 80 ~----~V~~-l~~~~~---~--~l~sgs~------dg~I~vwd-~~~~~~~~l~~h~~~V-------------------- 122 (557)
. .+.+ -....+ + .+++++. ++.|..+| .+|+.+.........+
T Consensus 148 ~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~~~~~~~~~p~~~~~~~~~g~~g~~~w~ 227 (582)
T 1flg_A 148 HGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPFVEGHMGRLNGKDSTVTGDVKAPSWP 227 (582)
T ss_dssp GGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEEESSTTCEEEETTEEEEESSCTTCTTSC
T ss_pred CCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeecCCCccccccccCcccccccccccccCC
Confidence 1 1110 111112 2 6666653 78999999 5788776553211000
Q ss_pred ---------------------EEEEEeCC-CeEEEEEC--------------------C----CeEEEEECCCCeEEEEE
Q psy7057 123 ---------------------RGLAVLND-TDFVSCSN--------------------D----ASIRVWDSTTGKCVHTM 156 (557)
Q Consensus 123 ---------------------~~l~~~~~-~~lvs~s~--------------------D----g~I~vwd~~~~~~~~~~ 156 (557)
..+++.|+ +.++.++. | +.|.-+|..+|+.+-.+
T Consensus 228 ~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~ 307 (582)
T 1flg_A 228 DDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFY 307 (582)
T ss_dssp BCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCEEEEE
T ss_pred CccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCCEEEEE
Confidence 12345555 45544442 2 68999999999999887
Q ss_pred eC--CC--------CcEEE-EE-EcCC---EEEEEeCCCeEEEEECCCC
Q psy7057 157 YG--HP--------NFIYS-VA-AHGD---LITSGGEDQCVCVYQNKAQ 190 (557)
Q Consensus 157 ~~--h~--------~~V~~-l~-~~~~---~l~s~s~Dg~I~iwd~~~~ 190 (557)
+. |. .++.. .. .+++ .++.++.+|.++++|..+.
T Consensus 308 q~~~~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG 356 (582)
T 1flg_A 308 QHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGFFYVVDRSNG 356 (582)
T ss_dssp ESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEEECTTSEEEEEETTTC
T ss_pred eCCCCCcccccCCCCcEEEeeecCCCCEEEEEEEECCCceEEEEECCCC
Confidence 53 32 12221 11 2453 6888999999999997665
No 266
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.42 E-value=0.022 Score=61.45 Aligned_cols=134 Identities=10% Similarity=0.029 Sum_probs=86.3
Q ss_pred CCcEEEEECCCcEEEEcCCC--------C---------CCCC--CCCEEEEEEC------CCeEEEEECCCCeEEEEEcc
Q psy7057 23 DGCILSASRDKSAKLWKPND--------L---------SPGA--KVNTLLSASW------DMTAKLWCLESQQCKLTIRQ 77 (557)
Q Consensus 23 dg~l~sgs~Dg~V~iWd~~~--------~---------~~~~--~~~~l~sgs~------Dg~i~iwd~~~~~~~~~l~~ 77 (557)
+++++.++.|+.|..+|..+ + ...| .+..++.++. ++.|..+|..+++.+.++..
T Consensus 115 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~ 194 (571)
T 2ad6_A 115 AGQIVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFA 194 (571)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEES
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEEEecCCCCCccceeccCCEEECCEEEEEecCCccCCCCEEEEEECCCCcEEEEEcc
Confidence 45577788888888888765 1 1111 2456777665 79999999999999887754
Q ss_pred cCCc-------------------------------------E-EEEEEcCC-CEEEEEECC----------------CeE
Q psy7057 78 HEMA-------------------------------------V-WGVIQLAN-GIIVTGCAD----------------KTI 102 (557)
Q Consensus 78 h~~~-------------------------------------V-~~l~~~~~-~~l~sgs~d----------------g~I 102 (557)
.... + ..+++.++ +.+..++.+ +.|
T Consensus 195 ~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v 274 (571)
T 2ad6_A 195 TGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTI 274 (571)
T ss_dssp SSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEE
T ss_pred CCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEE
Confidence 2211 0 12455554 466555532 358
Q ss_pred EEEe-CCCcEEEEEeC--CC--------CCEEEEEEeCCCe----EEEEECCCeEEEEECCCCeEEEEEe
Q psy7057 103 KLHS-EEGEFLKTLTG--HT--------DCVRGLAVLNDTD----FVSCSNDASIRVWDSTTGKCVHTMY 157 (557)
Q Consensus 103 ~vwd-~~~~~~~~l~~--h~--------~~V~~l~~~~~~~----lvs~s~Dg~I~vwd~~~~~~~~~~~ 157 (557)
..+| .+|+.+..+.. |. .++. +....+++ ++.++.+|.+.++|..+|+.+..+.
T Consensus 275 ~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l-~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~ 343 (571)
T 2ad6_A 275 WGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVL-TDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEK 343 (571)
T ss_dssp EEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred EEEecCCCcEEEEecCCCCcccccccCCCCEE-EecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeec
Confidence 8888 57888777653 21 1221 22223563 5578889999999999999887765
No 267
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.38 E-value=0.13 Score=50.69 Aligned_cols=212 Identities=9% Similarity=-0.075 Sum_probs=121.9
Q ss_pred CCeEEEEECCCCeEEEEEcccCCcEEEEEEcCC-C-EEEEEECCCeEEEEeCCC----cEEEE-EeCCCCCEEEEEEeC-
Q psy7057 58 DMTAKLWCLESQQCKLTIRQHEMAVWGVIQLAN-G-IIVTGCADKTIKLHSEEG----EFLKT-LTGHTDCVRGLAVLN- 129 (557)
Q Consensus 58 Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~-~-~l~sgs~dg~I~vwd~~~----~~~~~-l~~h~~~V~~l~~~~- 129 (557)
...|+..++.+.+....+. ....+..++|.+. + ++++-...+.|..++..+ ..... +...-.....+++.+
T Consensus 9 ~~~I~~i~~~~~~~~~~~~-~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~ 87 (316)
T 1ijq_A 9 RHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWI 87 (316)
T ss_dssp BSSEEEEETTSCCCEEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETT
T ss_pred CCeEEEEECCCcceEehhc-CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeec
Confidence 3568888988776555444 3456789999975 4 555555678899998665 33222 222234567888885
Q ss_pred CCeE-EEEECCCeEEEEECCCCeEEEEEeCCCCcEEEEEEc--CCEEEEEeC-C-CeEEEEECCCC--ceEe-eCCccEE
Q psy7057 130 DTDF-VSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAAH--GDLITSGGE-D-QCVCVYQNKAQ--NSFM-IPAMSVW 201 (557)
Q Consensus 130 ~~~l-vs~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~~--~~~l~s~s~-D-g~I~iwd~~~~--~~~~-~~~~~v~ 201 (557)
.+.+ ++-...+.|.+.++........+...-.....++++ +..|+.+.. . +.|...++... ..+. ..-....
T Consensus 88 ~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~~~~~~~~~P~ 167 (316)
T 1ijq_A 88 HSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPN 167 (316)
T ss_dssp TTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEE
T ss_pred CCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeEEEEECCCCCce
Confidence 4554 465677899999976544333333334566788884 444444443 3 68888886433 2222 2234678
Q ss_pred EEEEcCCCc-EE-EEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecCC
Q psy7057 202 AVAILPNSD-IV-TGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANP 272 (557)
Q Consensus 202 ~v~~~p~g~-l~-sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~ 272 (557)
.+++.|++. |. +-+..+.|..++.+...................+... .....++-...+.|..++...
T Consensus 168 gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~--~~~ly~~d~~~~~V~~~~~~~ 238 (316)
T 1ijq_A 168 GITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF--EDKVFWTDIINEAIFSANRLT 238 (316)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE--TTEEEEEETTTTEEEEEETTT
T ss_pred EEEEeccCCEEEEEECCCCeEEEEecCCCceEEEeecCCccCCcEEEEEE--CCEEEEEECCCCeEEEEeCCC
Confidence 999998765 44 4445678999998754322111100011122333332 233345555667777776543
No 268
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.34 E-value=0.11 Score=49.77 Aligned_cols=194 Identities=13% Similarity=0.093 Sum_probs=116.5
Q ss_pred EeccCcccEEEEEEcCCCcEEEEECCCcEEEEcCCCCCCCCCCCEEEEEECCCeEEEEECCCCeEEEEEcc-cCCcEEEE
Q psy7057 7 ALYGHSMDVRSLSVTPDGCILSASRDKSAKLWKPNDLSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQ-HEMAVWGV 85 (557)
Q Consensus 7 ~l~gH~~~V~~l~~spdg~l~sgs~Dg~V~iWd~~~~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~-h~~~V~~l 85 (557)
.|.|=.+.+..|+++|++. .++++...++.|...|+. ++.+..+.- -....-.|
T Consensus 21 ~l~g~~~~lSGla~~~~~~------------------------~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGI 75 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSN------------------------TLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETI 75 (255)
T ss_dssp ECTTCCSCEEEEEEETTTT------------------------EEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEE
T ss_pred ECCCcccCcceeEEeCCCC------------------------EEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHe
Confidence 4566667788899988743 222334445566666665 666655532 23567788
Q ss_pred EEcCCCEE-EEEECCCeEEEEeC--CCc--EEEEEe------CCCCCEEEEEEeCCC-eEEEEECCCeEEEEECC---CC
Q psy7057 86 IQLANGII-VTGCADKTIKLHSE--EGE--FLKTLT------GHTDCVRGLAVLNDT-DFVSCSNDASIRVWDST---TG 150 (557)
Q Consensus 86 ~~~~~~~l-~sgs~dg~I~vwd~--~~~--~~~~l~------~h~~~V~~l~~~~~~-~lvs~s~Dg~I~vwd~~---~~ 150 (557)
++.+++.+ ++.-.++.+.+++. .+. .+.... ......-.|++.|.+ +|+++.......+|.+. ..
T Consensus 76 a~~~~g~~~vs~E~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~ 155 (255)
T 3qqz_A 76 EYIGDNQFVISDERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSS 155 (255)
T ss_dssp EECSTTEEEEEETTTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCS
T ss_pred EEeCCCEEEEEECCCCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccC
Confidence 88888855 44445677888872 232 122221 123457899999986 56655554444444432 11
Q ss_pred eEEEEEeC-------CCCcEEEEEE---cCCEEEEEeCCCeEEEEECCCC--ceEeeCC---------ccEEEEEEcCCC
Q psy7057 151 KCVHTMYG-------HPNFIYSVAA---HGDLITSGGEDQCVCVYQNKAQ--NSFMIPA---------MSVWAVAILPNS 209 (557)
Q Consensus 151 ~~~~~~~~-------h~~~V~~l~~---~~~~l~s~s~Dg~I~iwd~~~~--~~~~~~~---------~~v~~v~~~p~g 209 (557)
..+..+.. +-..+.++++ .+.+++.....+.|.++|.... ..+.... ...-.|++.++|
T Consensus 156 ~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G 235 (255)
T 3qqz_A 156 NELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGEVIGEMSLTKGSRGLSHNIKQAEGVAMDASG 235 (255)
T ss_dssp SCCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTTCCEEEEEECSTTGGGCSSCCCSEEEEEECTTC
T ss_pred CceeeecchhhccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCCCCEEEEEEcCCccCCcccccCCCCeeEECCCC
Confidence 11222211 2234567777 3457777778888999986544 2222221 256789999999
Q ss_pred cEEEEEcCCcEEEEec
Q psy7057 210 DIVTGSSDGIVRVFSA 225 (557)
Q Consensus 210 ~l~sg~~Dg~I~iwd~ 225 (557)
.+...++-+.+++|..
T Consensus 236 ~lyIvsE~n~~y~f~~ 251 (255)
T 3qqz_A 236 NIYIVSEPNRFYRFTP 251 (255)
T ss_dssp CEEEEETTTEEEEEEC
T ss_pred CEEEEcCCceEEEEEe
Confidence 9877888887777754
No 269
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.25 E-value=0.0067 Score=66.71 Aligned_cols=213 Identities=12% Similarity=0.169 Sum_probs=114.6
Q ss_pred EEEEcC-CCc-EEEEECCC-----------cEEEEcCCC---------------C----CCCCCCCEEEEEEC-CCeEEE
Q psy7057 17 SLSVTP-DGC-ILSASRDK-----------SAKLWKPND---------------L----SPGAKVNTLLSASW-DMTAKL 63 (557)
Q Consensus 17 ~l~~sp-dg~-l~sgs~Dg-----------~V~iWd~~~---------------~----~~~~~~~~l~sgs~-Dg~i~i 63 (557)
++++.+ +++ ++.|+.+. .+.+||+.+ . ....++..++.|+. +..+.+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~ 269 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSL 269 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEE
Confidence 456677 788 56666543 588999876 1 11245778888874 468999
Q ss_pred EECCCCeEEEEEcccC-CcEEEEEEcCCC-EEEEEE-CC-----CeEEEEeCCCcEEEEEeCC-----CCCEEEEEEeCC
Q psy7057 64 WCLESQQCKLTIRQHE-MAVWGVIQLANG-IIVTGC-AD-----KTIKLHSEEGEFLKTLTGH-----TDCVRGLAVLND 130 (557)
Q Consensus 64 wd~~~~~~~~~l~~h~-~~V~~l~~~~~~-~l~sgs-~d-----g~I~vwd~~~~~~~~l~~h-----~~~V~~l~~~~~ 130 (557)
||+.+.+-...-..+. ..-.+++..+++ +++.|+ .+ ..+.+||.....-..+... ...-....+..+
T Consensus 270 yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~~ 349 (656)
T 1k3i_A 270 YDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSD 349 (656)
T ss_dssp EEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTTT
T ss_pred ecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccccceeecC
Confidence 9988765332211111 111244556566 777777 34 5688999554433332100 000000011122
Q ss_pred Ce-EEEEECC---------CeEEEEECCCCeEEEEEeCCC---------CcEEEEEE---cCCEEEEEeCCC--------
Q psy7057 131 TD-FVSCSND---------ASIRVWDSTTGKCVHTMYGHP---------NFIYSVAA---HGDLITSGGEDQ-------- 180 (557)
Q Consensus 131 ~~-lvs~s~D---------g~I~vwd~~~~~~~~~~~~h~---------~~V~~l~~---~~~~l~s~s~Dg-------- 180 (557)
+. ++.++.+ ..+..||..+.........+. ..-.++.+ ++++++.|+.++
T Consensus 350 ~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~ 429 (656)
T 1k3i_A 350 NHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATT 429 (656)
T ss_dssp CSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCC
T ss_pred CceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCC
Confidence 22 3444433 457888887765443332221 12234443 566777777432
Q ss_pred ---eEEEEECCCC--ceEe---eCCccE-EEEEEcCCCc-EEEEEcC-----------CcEEEEecCCCC
Q psy7057 181 ---CVCVYQNKAQ--NSFM---IPAMSV-WAVAILPNSD-IVTGSSD-----------GIVRVFSANPDR 229 (557)
Q Consensus 181 ---~I~iwd~~~~--~~~~---~~~~~v-~~v~~~p~g~-l~sg~~D-----------g~I~iwd~~~~~ 229 (557)
.|.+||..+. ..+. .+.... .++++.|+++ ++.|+.+ ..+.+||..+.+
T Consensus 430 ~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~ 499 (656)
T 1k3i_A 430 NAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDT 499 (656)
T ss_dssp CEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTE
T ss_pred cceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCc
Confidence 6778886654 2221 122222 3456778888 6677754 468888876543
No 270
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.19 E-value=0.028 Score=56.54 Aligned_cols=200 Identities=15% Similarity=0.094 Sum_probs=107.8
Q ss_pred ccEEEEEEcCCCcEEEEECCCcEEEEcCCC--------------------CCCCCC---CCEEEEEEC-C-----CeEEE
Q psy7057 13 MDVRSLSVTPDGCILSASRDKSAKLWKPND--------------------LSPGAK---VNTLLSASW-D-----MTAKL 63 (557)
Q Consensus 13 ~~V~~l~~spdg~l~sgs~Dg~V~iWd~~~--------------------~~~~~~---~~~l~sgs~-D-----g~i~i 63 (557)
..-+.|+|.|+|+|+.+..+|.|++++ .. ++++++ +..|..+.. . ..|..
T Consensus 31 ~~P~~ia~~pdG~l~V~e~~g~I~~i~-~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r 109 (352)
T 2ism_A 31 EVPWALAFLPDGGMLIAERPGRIRLFR-EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVR 109 (352)
T ss_dssp SCEEEEEECTTSCEEEEETTTEEEEEE-TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEE
T ss_pred CCceEEEEcCCCeEEEEeCCCeEEEEE-CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEEE
Confidence 356789999999988888889999886 11 445554 345544433 2 56777
Q ss_pred EECCCCe-----EEEE-Ec---ccCCcEEEEEEcCCCEEEEEEC--------------CCeEEEEeCCCcE---------
Q psy7057 64 WCLESQQ-----CKLT-IR---QHEMAVWGVIQLANGIIVTGCA--------------DKTIKLHSEEGEF--------- 111 (557)
Q Consensus 64 wd~~~~~-----~~~~-l~---~h~~~V~~l~~~~~~~l~sgs~--------------dg~I~vwd~~~~~--------- 111 (557)
++...+. .+.. +. ........++|.|+|.|..+.. .+.|.-++.++..
T Consensus 110 ~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf~~~ 189 (352)
T 2ism_A 110 LRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNPFLGR 189 (352)
T ss_dssp EEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTTTTC
T ss_pred EEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCcccCC
Confidence 7776431 1222 33 1112335799999994333322 2456666655411
Q ss_pred -----EEEEeCCCCCEEEEEEeC-CCeEEEEECC-Ce--------EEEEECCC----------------CeEEEEEeCCC
Q psy7057 112 -----LKTLTGHTDCVRGLAVLN-DTDFVSCSND-AS--------IRVWDSTT----------------GKCVHTMYGHP 160 (557)
Q Consensus 112 -----~~~l~~h~~~V~~l~~~~-~~~lvs~s~D-g~--------I~vwd~~~----------------~~~~~~~~~h~ 160 (557)
.....+| .....++|+| ++.|.++... .. |.+..... ..++..+ .+.
T Consensus 190 ~~~~~~i~a~G~-rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~-~~~ 267 (352)
T 2ism_A 190 RGARPEVYSLGH-RNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRGNDPRYRDPLYFW-PQG 267 (352)
T ss_dssp TTSCTTEEEECC-SEECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEEC-TTC
T ss_pred CCCCccEEEEcC-CCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCCCCCCCcCCeEec-CCC
Confidence 1111233 2367788998 5665543322 22 33332110 0122233 223
Q ss_pred CcEEEEEE-cCCEEEEEeCCCeEEEEECCCC---------ceEeeCCccEEEEEEcCCCcEEEEE
Q psy7057 161 NFIYSVAA-HGDLITSGGEDQCVCVYQNKAQ---------NSFMIPAMSVWAVAILPNSDIVTGS 215 (557)
Q Consensus 161 ~~V~~l~~-~~~~l~s~s~Dg~I~iwd~~~~---------~~~~~~~~~v~~v~~~p~g~l~sg~ 215 (557)
.....+++ .+..+++.-..+.|...++... ..+......+..+++.|+|.|..+.
T Consensus 268 ~ap~G~~~~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~~ 332 (352)
T 2ism_A 268 FPPGNLAFFRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETALSGFGRLREVQVGPDGALYVTT 332 (352)
T ss_dssp CCEEEEEEETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEESSCCEEEEEECTTSCEEEEE
T ss_pred CCCcceEEECCEEEEEECCCCEEEEEEECCCCcceeecchheecccCCCeeEEEECCCCcEEEEE
Confidence 34556776 6666666666677777764322 1121223467888888888844333
No 271
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.17 E-value=0.12 Score=51.86 Aligned_cols=174 Identities=12% Similarity=0.041 Sum_probs=107.1
Q ss_pred cEEEEEEcCCC-cEE-EEECCCcEEEEcCCC----------------CCCCCCCCEE-EEEECCCeEEEEECCCCeEEEE
Q psy7057 14 DVRSLSVTPDG-CIL-SASRDKSAKLWKPND----------------LSPGAKVNTL-LSASWDMTAKLWCLESQQCKLT 74 (557)
Q Consensus 14 ~V~~l~~spdg-~l~-sgs~Dg~V~iWd~~~----------------~~~~~~~~~l-~sgs~Dg~i~iwd~~~~~~~~~ 74 (557)
....++|.+.+ .|+ +-...+.|..+++.. +++++.+..| ++-...+.|.+.++........
T Consensus 74 ~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l 153 (349)
T 3v64_C 74 NAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVL 153 (349)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE
T ss_pred ceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEE
Confidence 46788998654 454 545677888887764 2333333333 4444457788888765443333
Q ss_pred EcccCCcEEEEEEcCC-C-EEEEEECC-CeEEEEeCCCcEEEEEeC-CCCCEEEEEEeCC-CeEE-EEECCCeEEEEECC
Q psy7057 75 IRQHEMAVWGVIQLAN-G-IIVTGCAD-KTIKLHSEEGEFLKTLTG-HTDCVRGLAVLND-TDFV-SCSNDASIRVWDST 148 (557)
Q Consensus 75 l~~h~~~V~~l~~~~~-~-~l~sgs~d-g~I~vwd~~~~~~~~l~~-h~~~V~~l~~~~~-~~lv-s~s~Dg~I~vwd~~ 148 (557)
+...-.....+++.|. + ++++-... +.|...+.++.....+.. .-.....|+++++ +.|. +-+..+.|..+|+.
T Consensus 154 ~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~d 233 (349)
T 3v64_C 154 LWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLD 233 (349)
T ss_dssp ECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred EeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCC
Confidence 3334456789999984 5 44444444 778888887766555432 3345789999975 5544 55567889999976
Q ss_pred CCeEEEEEeCCCCcEEEEEEcCC-EEEEEeCCCeEEEEEC
Q psy7057 149 TGKCVHTMYGHPNFIYSVAAHGD-LITSGGEDQCVCVYQN 187 (557)
Q Consensus 149 ~~~~~~~~~~h~~~V~~l~~~~~-~l~s~s~Dg~I~iwd~ 187 (557)
.......+...-.....|++.+. .+++-...+.|..++.
T Consensus 234 G~~~~~~~~~~~~~P~giav~~~~ly~td~~~~~V~~~~~ 273 (349)
T 3v64_C 234 GSHRKAVISQGLPHPFAITVFEDSLYWTDWHTKSINSANK 273 (349)
T ss_dssp SCSCEEEECSSCSSEEEEEEETTEEEEEETTTTEEEEEET
T ss_pred CCceEEEEeCCCCCceEEEEECCEEEEecCCCCeEEEEEc
Confidence 43333333333445567777444 4555556777887773
No 272
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.16 E-value=0.13 Score=52.43 Aligned_cols=210 Identities=9% Similarity=0.006 Sum_probs=122.0
Q ss_pred EEEEcCCCcEEEEECCCcEEEEcCCC---------------CCCCCCCCEEEEE-ECCCeEEEEECCCCeEEEEEcccCC
Q psy7057 17 SLSVTPDGCILSASRDKSAKLWKPND---------------LSPGAKVNTLLSA-SWDMTAKLWCLESQQCKLTIRQHEM 80 (557)
Q Consensus 17 ~l~~spdg~l~sgs~Dg~V~iWd~~~---------------~~~~~~~~~l~sg-s~Dg~i~iwd~~~~~~~~~l~~h~~ 80 (557)
|.+..+.+ ++..+....|+..++.. +.+++..+.|+.. ...+.|..+++........+.....
T Consensus 81 C~~~~~~~-~l~~~~~~~I~~i~~~~~~~~~~~~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~ 159 (386)
T 3v65_B 81 CKALGPEP-VLLFANRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLE 159 (386)
T ss_dssp EEECSSCC-EEEEECBSCEEEECTTSCCCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCS
T ss_pred ECCccccc-eeEeecCccceeeccCCCcEEEEecCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCC
Confidence 44444433 33334456677777654 3444444444444 4567788888776554443433333
Q ss_pred cEEEEEEcC-CC-EEEEEECCCeEEEEeCCCcEEEEEe-CCCCCEEEEEEeCC-CeEE-EEECC-CeEEEEECCCCeEEE
Q psy7057 81 AVWGVIQLA-NG-IIVTGCADKTIKLHSEEGEFLKTLT-GHTDCVRGLAVLND-TDFV-SCSND-ASIRVWDSTTGKCVH 154 (557)
Q Consensus 81 ~V~~l~~~~-~~-~l~sgs~dg~I~vwd~~~~~~~~l~-~h~~~V~~l~~~~~-~~lv-s~s~D-g~I~vwd~~~~~~~~ 154 (557)
....+++.+ .+ ++++-...+.|.+.+..+.....+. ..-.....|++.|. +.|+ +-... +.|...++.......
T Consensus 160 ~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~ 239 (386)
T 3v65_B 160 SPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRI 239 (386)
T ss_dssp CCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEE
T ss_pred CccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEE
Confidence 456778876 34 5566666788988887776544443 33466899999986 5544 44444 678888875433222
Q ss_pred EEeCCCCcEEEEEEc--CC-EEEEEeCCCeEEEEECCCC--ceEe-eCCccEEEEEEcCCCc-EEEEEcCCcEEEEecCC
Q psy7057 155 TMYGHPNFIYSVAAH--GD-LITSGGEDQCVCVYQNKAQ--NSFM-IPAMSVWAVAILPNSD-IVTGSSDGIVRVFSANP 227 (557)
Q Consensus 155 ~~~~h~~~V~~l~~~--~~-~l~s~s~Dg~I~iwd~~~~--~~~~-~~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~ 227 (557)
.....-.....|+++ +. ++++-+..+.|..++.... ..+. ........+++. .+. +++-...+.|..++..+
T Consensus 240 ~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~giav~-~~~ly~td~~~~~V~~~~~~~ 318 (386)
T 3v65_B 240 IADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITVF-EDSLYWTDWHTKSINSANKFT 318 (386)
T ss_dssp EECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSSCSSEEEEEEE-TTEEEEEETTTTEEEEEETTT
T ss_pred EEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECCCCCceEEEEE-CCEEEEeeCCCCeEEEEECCC
Confidence 222233456778883 44 4455566788999986543 2222 223356677773 344 55555677788877444
Q ss_pred C
Q psy7057 228 D 228 (557)
Q Consensus 228 ~ 228 (557)
+
T Consensus 319 G 319 (386)
T 3v65_B 319 G 319 (386)
T ss_dssp C
T ss_pred C
Confidence 3
No 273
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.15 E-value=0.17 Score=49.42 Aligned_cols=181 Identities=13% Similarity=0.095 Sum_probs=105.8
Q ss_pred CCCCCCCCEEEEEECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCCCEEEEEE-C-CC-eEEEEe-CCCcEEEEEe-C
Q psy7057 43 LSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGC-A-DK-TIKLHS-EEGEFLKTLT-G 117 (557)
Q Consensus 43 ~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~~l~sgs-~-dg-~I~vwd-~~~~~~~~l~-~ 117 (557)
+.+++++..+++-..++.|..|+.... ....+. ....+.++++.+++.++.+. . ++ .|..++ .+++...... .
T Consensus 37 ia~~~~g~lyv~d~~~~~I~~~d~~g~-~~~~~~-~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~~~~~~ 114 (306)
T 2p4o_A 37 LASAPDGTIFVTNHEVGEIVSITPDGN-QQIHAT-VEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETLLTLP 114 (306)
T ss_dssp EEECTTSCEEEEETTTTEEEEECTTCC-EEEEEE-CSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEEEECT
T ss_pred EEECCCCCEEEEeCCCCeEEEECCCCc-eEEEEe-CCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEEEEeCC
Confidence 344556776666667889999997653 333332 34578899999988444443 3 22 466666 4555432222 1
Q ss_pred CCCCEEEEEEeCCCeEE-EEECCCeEEEEECCCCeE-EEEEe---------CCCCcEEEEEEcCCEE-EEEeCCCeEEEE
Q psy7057 118 HTDCVRGLAVLNDTDFV-SCSNDASIRVWDSTTGKC-VHTMY---------GHPNFIYSVAAHGDLI-TSGGEDQCVCVY 185 (557)
Q Consensus 118 h~~~V~~l~~~~~~~lv-s~s~Dg~I~vwd~~~~~~-~~~~~---------~h~~~V~~l~~~~~~l-~s~s~Dg~I~iw 185 (557)
.......++..+++.++ +-+.++.|..+|..+++. +.... ..-.....|+.+++.| ++-+..+.|..|
T Consensus 115 ~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngis~dg~~lyv~d~~~~~I~~~ 194 (306)
T 2p4o_A 115 DAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRFGNFLYVSNTEKMLLLRI 194 (306)
T ss_dssp TCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEETTEEEEEETTTTEEEEE
T ss_pred CccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCcCcCCCEEEEEeCCCCEEEEE
Confidence 22334556656666644 444688999999765532 21111 1112345566677655 455567899999
Q ss_pred ECCC-C-----ceEeeCCccEEEEEEcCCCcEEEE-EcCCcEEEEecC
Q psy7057 186 QNKA-Q-----NSFMIPAMSVWAVAILPNSDIVTG-SSDGIVRVFSAN 226 (557)
Q Consensus 186 d~~~-~-----~~~~~~~~~v~~v~~~p~g~l~sg-~~Dg~I~iwd~~ 226 (557)
+... . ..+.. ......+++.++|.+.++ ...+.|.+++..
T Consensus 195 ~~~~~g~~~~~~~~~~-~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~ 241 (306)
T 2p4o_A 195 PVDSTDKPGEPEIFVE-QTNIDDFAFDVEGNLYGATHIYNSVVRIAPD 241 (306)
T ss_dssp EBCTTSCBCCCEEEEE-SCCCSSEEEBTTCCEEEECBTTCCEEEECTT
T ss_pred EeCCCCCCCccEEEec-cCCCCCeEECCCCCEEEEeCCCCeEEEECCC
Confidence 9653 1 11211 124567889999985544 456789999865
No 274
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.12 E-value=0.068 Score=54.48 Aligned_cols=175 Identities=11% Similarity=0.021 Sum_probs=107.3
Q ss_pred ccEEEEEEcCC-CcEE-EEECCCcEEEEcCCC----------------CCCCCCCCEE-EEEECCCeEEEEECCCCeEEE
Q psy7057 13 MDVRSLSVTPD-GCIL-SASRDKSAKLWKPND----------------LSPGAKVNTL-LSASWDMTAKLWCLESQQCKL 73 (557)
Q Consensus 13 ~~V~~l~~spd-g~l~-sgs~Dg~V~iWd~~~----------------~~~~~~~~~l-~sgs~Dg~i~iwd~~~~~~~~ 73 (557)
.....++|.+. +.|+ +-...+.|..+++.. +++++.+..| ++-...+.|.+.++.......
T Consensus 116 ~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~ 195 (386)
T 3v65_B 116 ENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKV 195 (386)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEE
T ss_pred CccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEE
Confidence 34678899875 4454 545677888887764 2333333333 344445677777766543333
Q ss_pred EEcccCCcEEEEEEcCCC-EE-EEEECC-CeEEEEeCCCcEEEEEe-CCCCCEEEEEEeCC-CeEE-EEECCCeEEEEEC
Q psy7057 74 TIRQHEMAVWGVIQLANG-II-VTGCAD-KTIKLHSEEGEFLKTLT-GHTDCVRGLAVLND-TDFV-SCSNDASIRVWDS 147 (557)
Q Consensus 74 ~l~~h~~~V~~l~~~~~~-~l-~sgs~d-g~I~vwd~~~~~~~~l~-~h~~~V~~l~~~~~-~~lv-s~s~Dg~I~vwd~ 147 (557)
.+...-.....+++.|.+ .| ++-... +.|...+..+.....+. ..-.....|+++++ +.|. +-+..+.|..+|+
T Consensus 196 l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~ 275 (386)
T 3v65_B 196 LLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANL 275 (386)
T ss_dssp EECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECT
T ss_pred eecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeC
Confidence 344344667899999854 44 444344 67888887776555543 23445789999965 5544 5566788999997
Q ss_pred CCCeEEEEEeCCCCcEEEEEEcCC-EEEEEeCCCeEEEEEC
Q psy7057 148 TTGKCVHTMYGHPNFIYSVAAHGD-LITSGGEDQCVCVYQN 187 (557)
Q Consensus 148 ~~~~~~~~~~~h~~~V~~l~~~~~-~l~s~s~Dg~I~iwd~ 187 (557)
........+.........|++++. ++++-...+.|..++.
T Consensus 276 dG~~~~~~~~~~~~~P~giav~~~~ly~td~~~~~V~~~~~ 316 (386)
T 3v65_B 276 DGSHRKAVISQGLPHPFAITVFEDSLYWTDWHTKSINSANK 316 (386)
T ss_dssp TSCSCEEEECSSCSSEEEEEEETTEEEEEETTTTEEEEEET
T ss_pred CCCeeEEEEECCCCCceEEEEECCEEEEeeCCCCeEEEEEC
Confidence 644333333333445667777444 5556667778888873
No 275
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.06 E-value=0.05 Score=56.39 Aligned_cols=212 Identities=9% Similarity=0.045 Sum_probs=119.9
Q ss_pred cEEEEEEcCC--CcEEEEECCCcEEEEcCCC---------------CCCCCCCCEEEEEECC-C----eEEEEECCCC-e
Q psy7057 14 DVRSLSVTPD--GCILSASRDKSAKLWKPND---------------LSPGAKVNTLLSASWD-M----TAKLWCLESQ-Q 70 (557)
Q Consensus 14 ~V~~l~~spd--g~l~sgs~Dg~V~iWd~~~---------------~~~~~~~~~l~sgs~D-g----~i~iwd~~~~-~ 70 (557)
....|+++|+ +.|+.+...+.|+.+|+.. +++++++++|+.+... + .+...+.... .
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~~~ 217 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRESGFK 217 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGTSC
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCcee
Confidence 3468899973 5577666668888888765 5566777766665542 1 2333332221 1
Q ss_pred EEEEEcccCCcEEEEEEcC-CC-EEEEEECCCeEEEEeCCCcEEEEEe--CCCCCEEEEEEeCCCe-EE-EEECCCeEEE
Q psy7057 71 CKLTIRQHEMAVWGVIQLA-NG-IIVTGCADKTIKLHSEEGEFLKTLT--GHTDCVRGLAVLNDTD-FV-SCSNDASIRV 144 (557)
Q Consensus 71 ~~~~l~~h~~~V~~l~~~~-~~-~l~sgs~dg~I~vwd~~~~~~~~l~--~h~~~V~~l~~~~~~~-lv-s~s~Dg~I~v 144 (557)
....+.. ......+++.| ++ ++++-..++.|..++..+.....+. +.....+.|+++|++. ++ +-...+.|..
T Consensus 218 ~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~ 296 (430)
T 3tc9_A 218 VITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILR 296 (430)
T ss_dssp SEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEE
T ss_pred eeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEE
Confidence 0122221 23345778899 66 4555556788999997665542222 1224578999999987 44 5556788999
Q ss_pred EECCC--CeE--EEEEeCC---C------------CcEE-EEEEc----------CCEEEEEeCCCeEEEEECCCC-ceE
Q psy7057 145 WDSTT--GKC--VHTMYGH---P------------NFIY-SVAAH----------GDLITSGGEDQCVCVYQNKAQ-NSF 193 (557)
Q Consensus 145 wd~~~--~~~--~~~~~~h---~------------~~V~-~l~~~----------~~~l~s~s~Dg~I~iwd~~~~-~~~ 193 (557)
++... ++. +..+.+. . .... .++.+ +.++++-...+.|+.++.... ..+
T Consensus 297 ~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~~~G~v~~~ 376 (430)
T 3tc9_A 297 SDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILTPQGRVTTF 376 (430)
T ss_dssp EEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEECTTSEEEEE
T ss_pred EeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEEEECCCCcEEEE
Confidence 87542 222 2222221 0 0122 34332 334445455678888873322 222
Q ss_pred eeC---------C---------ccEEEEEEcC-CCcEEEE-EcCCcEEEEecC
Q psy7057 194 MIP---------A---------MSVWAVAILP-NSDIVTG-SSDGIVRVFSAN 226 (557)
Q Consensus 194 ~~~---------~---------~~v~~v~~~p-~g~l~sg-~~Dg~I~iwd~~ 226 (557)
.+. . ...+.+++.| ++.|+.+ ...+.||.++.+
T Consensus 377 ~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 429 (430)
T 3tc9_A 377 AGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGYE 429 (430)
T ss_dssp EECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred EeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEccC
Confidence 221 1 1478999999 4665444 456778887754
No 276
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.03 E-value=0.028 Score=62.76 Aligned_cols=174 Identities=11% Similarity=0.110 Sum_probs=102.3
Q ss_pred cEEEEEEc-CCCc-EE-EEECCC----cEEEEcCCC---------------CCCCCCCCEEEEEECC-----CeEEEEEC
Q psy7057 14 DVRSLSVT-PDGC-IL-SASRDK----SAKLWKPND---------------LSPGAKVNTLLSASWD-----MTAKLWCL 66 (557)
Q Consensus 14 ~V~~l~~s-pdg~-l~-sgs~Dg----~V~iWd~~~---------------~~~~~~~~~l~sgs~D-----g~i~iwd~ 66 (557)
.+...+|| |||+ |+ +.+.+| +|+++|+.+ +.|+++++.|+....+ ..|.++++
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~l 254 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVSGTNGEIVWGPDHTSLFYVTKDETLRENKVWRHVM 254 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEEEECSCCEECSSTTEEEEEEECTTCCEEEEEEEET
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCccccCceeeEEEecCCCEEEEEEECCCCCCCEEEEEEC
Confidence 67889999 9998 55 444443 488888653 4567788888777765 35788888
Q ss_pred CCCe--EEEEEc-ccCCcEEEEEEcCCC-EEEEEE-C--CCeEEEEeCCCc--EE--EEEe-CCCCCEEEEEEeCCCeEE
Q psy7057 67 ESQQ--CKLTIR-QHEMAVWGVIQLANG-IIVTGC-A--DKTIKLHSEEGE--FL--KTLT-GHTDCVRGLAVLNDTDFV 134 (557)
Q Consensus 67 ~~~~--~~~~l~-~h~~~V~~l~~~~~~-~l~sgs-~--dg~I~vwd~~~~--~~--~~l~-~h~~~V~~l~~~~~~~lv 134 (557)
.++. ....+. .+......+.|+|++ .|+..+ . ...|.++|..+. .. ..+. .......++.|+..+.|+
T Consensus 255 gt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~g~~l~ 334 (751)
T 2xe4_A 255 GKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHGTSHLV 334 (751)
T ss_dssp TSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEETTTEEE
T ss_pred CCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeeeCCEEE
Confidence 7763 122332 233456788999999 444433 2 334777775432 22 3333 344566777766666665
Q ss_pred EEE-CC----CeEEEEECCCCeEEEE-EeCCCC--cEEEEEEcCC-EEEEEeCCCeE--EEEEC
Q psy7057 135 SCS-ND----ASIRVWDSTTGKCVHT-MYGHPN--FIYSVAAHGD-LITSGGEDQCV--CVYQN 187 (557)
Q Consensus 135 s~s-~D----g~I~vwd~~~~~~~~~-~~~h~~--~V~~l~~~~~-~l~s~s~Dg~I--~iwd~ 187 (557)
..+ .+ ..|..+++.++..... +..|.. .+..+.+.++ ++++...++.. .++++
T Consensus 335 ~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~~~~lv~~~~~~g~~~l~~~dl 398 (751)
T 2xe4_A 335 ILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVRSNYLVVAGRRAGLTRIWTMMA 398 (751)
T ss_dssp EEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEECSSEEEEEEEETTEEEEEEEEC
T ss_pred EEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEECCEEEEEEEeCCEEEEEEEec
Confidence 433 33 3577777764222222 233333 4566777555 45566777754 44554
No 277
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.02 E-value=0.26 Score=49.25 Aligned_cols=212 Identities=8% Similarity=0.011 Sum_probs=121.7
Q ss_pred cEEEEEEcCCCcEEEEECCCcEEEEcCCC---------------CCCCCCCCEEEEEE-CCCeEEEEECCCCeEEEEEcc
Q psy7057 14 DVRSLSVTPDGCILSASRDKSAKLWKPND---------------LSPGAKVNTLLSAS-WDMTAKLWCLESQQCKLTIRQ 77 (557)
Q Consensus 14 ~V~~l~~spdg~l~sgs~Dg~V~iWd~~~---------------~~~~~~~~~l~sgs-~Dg~i~iwd~~~~~~~~~l~~ 77 (557)
..+|.+..++..|+ -+....|+..++.. +.+++..+.|+... ..+.|..+++........+..
T Consensus 35 ~~~C~~~~~~~~ll-~~~~~~I~~i~~~g~~~~~~~~~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~ 113 (349)
T 3v64_C 35 RRSCKALGPEPVLL-FANRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVST 113 (349)
T ss_dssp SSCEEESSSCCEEE-EECBSCEEEECTTSCCEEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECS
T ss_pred CCcccccccCceeE-eecccceEEEeCCCCeeEEeecCCCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeC
Confidence 34455555533333 33445566666654 34444444444443 456777777766543333333
Q ss_pred cCCcEEEEEEcC-CC-EEEEEECCCeEEEEeCCCcEEEEEe-CCCCCEEEEEEeCC-CeEE-EEECC-CeEEEEECCCCe
Q psy7057 78 HEMAVWGVIQLA-NG-IIVTGCADKTIKLHSEEGEFLKTLT-GHTDCVRGLAVLND-TDFV-SCSND-ASIRVWDSTTGK 151 (557)
Q Consensus 78 h~~~V~~l~~~~-~~-~l~sgs~dg~I~vwd~~~~~~~~l~-~h~~~V~~l~~~~~-~~lv-s~s~D-g~I~vwd~~~~~ 151 (557)
.......+++.+ .+ ++++-...+.|.+.+.++.....+. ..-.....+++.|. +.+. +-... +.|...++...
T Consensus 114 ~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~- 192 (349)
T 3v64_C 114 GLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGS- 192 (349)
T ss_dssp SCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC-
T ss_pred CCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCC-
Confidence 334456788876 44 5566666788999997776544443 33456899999985 5544 54444 78888887543
Q ss_pred EEEEE-eCCCCcEEEEEEc--CCE-EEEEeCCCeEEEEECCCC--ceEe-eCCccEEEEEEcCCCc-EEEEEcCCcEEEE
Q psy7057 152 CVHTM-YGHPNFIYSVAAH--GDL-ITSGGEDQCVCVYQNKAQ--NSFM-IPAMSVWAVAILPNSD-IVTGSSDGIVRVF 223 (557)
Q Consensus 152 ~~~~~-~~h~~~V~~l~~~--~~~-l~s~s~Dg~I~iwd~~~~--~~~~-~~~~~v~~v~~~p~g~-l~sg~~Dg~I~iw 223 (557)
....+ ...-.....|+++ +.. +++-+..+.|..++.... ..+. ........+++. .+. +++-...+.|..+
T Consensus 193 ~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~giav~-~~~ly~td~~~~~V~~~ 271 (349)
T 3v64_C 193 GRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITVF-EDSLYWTDWHTKSINSA 271 (349)
T ss_dssp SCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEE-TTEEEEEETTTTEEEEE
T ss_pred CcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCCCCCceEEEEE-CCEEEEecCCCCeEEEE
Confidence 22232 2223456778884 444 445556678999986543 2222 223355677773 444 4455556777777
Q ss_pred ecCCC
Q psy7057 224 SANPD 228 (557)
Q Consensus 224 d~~~~ 228 (557)
+..++
T Consensus 272 ~~~~G 276 (349)
T 3v64_C 272 NKFTG 276 (349)
T ss_dssp ETTTC
T ss_pred EccCC
Confidence 74333
No 278
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.00 E-value=0.39 Score=49.01 Aligned_cols=177 Identities=10% Similarity=-0.013 Sum_probs=110.7
Q ss_pred EEEEEECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCC-C-EEEEEECCCeEEEEeCCCc-----EEEEEeCCCCCEE
Q psy7057 51 TLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLAN-G-IIVTGCADKTIKLHSEEGE-----FLKTLTGHTDCVR 123 (557)
Q Consensus 51 ~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~-~-~l~sgs~dg~I~vwd~~~~-----~~~~l~~h~~~V~ 123 (557)
+|+.+. ...|+..++........+. ....+..++|.+. + ++++-...+.|+.++..+. ....+........
T Consensus 85 ~ll~~~-~~~I~~i~l~~~~~~~~~~-~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~ 162 (400)
T 3p5b_L 85 YLFFTN-RHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD 162 (400)
T ss_dssp EEEEEE-TTEEEEECTTSCSCEEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEE
T ss_pred eeEEec-cceeEEEccCCcceeEecc-ccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcc
Confidence 444444 4688888987765444443 4567789999974 4 4555556788888886552 2233333445688
Q ss_pred EEEEeC-CCeEE-EEECCCeEEEEECCCCeEEEEEeCCCCcEEEEEEc--CCEEEEEe-C-CCeEEEEECCCC--ceEe-
Q psy7057 124 GLAVLN-DTDFV-SCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAAH--GDLITSGG-E-DQCVCVYQNKAQ--NSFM- 194 (557)
Q Consensus 124 ~l~~~~-~~~lv-s~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~~--~~~l~s~s-~-Dg~I~iwd~~~~--~~~~- 194 (557)
.|++.+ .+.|+ +-...+.|.+.++........+...-.....|+++ +..|+... . .+.|...++... ..+.
T Consensus 163 glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~ 242 (400)
T 3p5b_L 163 GLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVT 242 (400)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEEC
T ss_pred cEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEE
Confidence 899987 45544 66677899999987554444444344557788884 34444443 2 367888886543 2222
Q ss_pred eCCccEEEEEEcCCCc-EE-EEEcCCcEEEEecCCCC
Q psy7057 195 IPAMSVWAVAILPNSD-IV-TGSSDGIVRVFSANPDR 229 (557)
Q Consensus 195 ~~~~~v~~v~~~p~g~-l~-sg~~Dg~I~iwd~~~~~ 229 (557)
..-.....|++.+++. |. +=...+.|+.++++...
T Consensus 243 ~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~ 279 (400)
T 3p5b_L 243 ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGN 279 (400)
T ss_dssp SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCC
T ss_pred CCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCc
Confidence 2224678999998765 54 44456789999987543
No 279
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=96.98 E-value=0.02 Score=61.16 Aligned_cols=177 Identities=8% Similarity=-0.013 Sum_probs=111.0
Q ss_pred CCEEEEEEC-CCeEEEEECCCCeEEEEEcc-cCCcEEEEEE-c-CCC-EEEEEE------------------CCCeEEEE
Q psy7057 49 VNTLLSASW-DMTAKLWCLESQQCKLTIRQ-HEMAVWGVIQ-L-ANG-IIVTGC------------------ADKTIKLH 105 (557)
Q Consensus 49 ~~~l~sgs~-Dg~i~iwd~~~~~~~~~l~~-h~~~V~~l~~-~-~~~-~l~sgs------------------~dg~I~vw 105 (557)
++++..... +.+|.+.|+.+.++...+.- ....+..+++ . |++ ++++++ .++.+.+.
T Consensus 101 G~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvI 180 (595)
T 1fwx_A 101 GRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAV 180 (595)
T ss_dssp EEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEE
T ss_pred CCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEE
Confidence 455555544 56799999999998875532 2345778887 4 776 666664 24578888
Q ss_pred eC-CCcEEEEEeCCCCCEEEEEEeCCCeEE-EEECCC--------------------------------------eEEEE
Q psy7057 106 SE-EGEFLKTLTGHTDCVRGLAVLNDTDFV-SCSNDA--------------------------------------SIRVW 145 (557)
Q Consensus 106 d~-~~~~~~~l~~h~~~V~~l~~~~~~~lv-s~s~Dg--------------------------------------~I~vw 145 (557)
|. +.+.+.++.--. ....++++|+++++ +++.+. .|.+.
T Consensus 181 D~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VI 259 (595)
T 1fwx_A 181 DADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVV 259 (595)
T ss_dssp ETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEE
T ss_pred ECCCCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEE
Confidence 84 445555554212 34567788887743 444332 36666
Q ss_pred ECCC--CeE-EEEEeCCCCcEEEEEE--cCCEEEEE-eCCCeEEEEECCCCc------------eE--eeCCccEEEEEE
Q psy7057 146 DSTT--GKC-VHTMYGHPNFIYSVAA--HGDLITSG-GEDQCVCVYQNKAQN------------SF--MIPAMSVWAVAI 205 (557)
Q Consensus 146 d~~~--~~~-~~~~~~h~~~V~~l~~--~~~~l~s~-s~Dg~I~iwd~~~~~------------~~--~~~~~~v~~v~~ 205 (557)
|.++ ++. +..+.. .....++.+ +|++++++ ..+.+|.++|..+.. .. .......+.++|
T Consensus 260 D~~~~~~~~~~~~Ipv-g~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~aF 338 (595)
T 1fwx_A 260 DGRKEASSLFTRYIPI-ANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHTAF 338 (595)
T ss_dssp ECSGGGCCSSEEEEEE-ESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEEEEE
T ss_pred eCcccCCceeEEEEec-CCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCcceEEE
Confidence 7665 433 334431 112234444 78876555 477899999977442 11 122346899999
Q ss_pred cCCCc-EEEEEcCCcEEEEecCC
Q psy7057 206 LPNSD-IVTGSSDGIVRVFSANP 227 (557)
Q Consensus 206 ~p~g~-l~sg~~Dg~I~iwd~~~ 227 (557)
+|+|. +++.--|+.|.+|++..
T Consensus 339 ~~dG~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 339 DGRGNAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp CTTSEEEEEETTTTEEEEEEHHH
T ss_pred CCCCeEEEEEecCCcEEEEEhhH
Confidence 99997 45666799999999865
No 280
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=96.96 E-value=0.056 Score=53.65 Aligned_cols=173 Identities=10% Similarity=0.028 Sum_probs=99.6
Q ss_pred CcccEEEEEEcCCCcEEEEECCCcE-EEEcCCC---------------CCCCCCCCEEEEEECCCeEEEEEC--CCCeEE
Q psy7057 11 HSMDVRSLSVTPDGCILSASRDKSA-KLWKPND---------------LSPGAKVNTLLSASWDMTAKLWCL--ESQQCK 72 (557)
Q Consensus 11 H~~~V~~l~~spdg~l~sgs~Dg~V-~iWd~~~---------------~~~~~~~~~l~sgs~Dg~i~iwd~--~~~~~~ 72 (557)
+.+.+.+|.+.+++.++.++.++.| +-+|--. +.+.+.+..++.+...+..+-+|- .+.+.+
T Consensus 120 ~~~~~~~i~~~~~~~~~~~~~~g~v~~S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW~~~ 199 (327)
T 2xbg_A 120 LPGSPRLIKALGNGSAEMITNVGAIYRTKDSGKNWQALVQEAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEPH 199 (327)
T ss_dssp CSSCEEEEEEEETTEEEEEETTCCEEEESSTTSSEEEEECSCCCCEEEEEECTTSCEEEEETTSSEEEEECTTCSSCEEE
T ss_pred CCCCeEEEEEECCCCEEEEeCCccEEEEcCCCCCCEEeecCCCcceEEEEEcCCCcEEEEECCCcEEEEeCCCCCceeEC
Confidence 3456788888777775555556654 3333111 223344555544433333333342 233333
Q ss_pred EEEcccCCcEEEEEEcCCCEEEEEECCCeEEEEeCC-CcEEEEEe-C---CCCCEEEEEEeCCCeEEEEECCCeEEEEEC
Q psy7057 73 LTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHSEE-GEFLKTLT-G---HTDCVRGLAVLNDTDFVSCSNDASIRVWDS 147 (557)
Q Consensus 73 ~~l~~h~~~V~~l~~~~~~~l~sgs~dg~I~vwd~~-~~~~~~l~-~---h~~~V~~l~~~~~~~lvs~s~Dg~I~vwd~ 147 (557)
. ......+..+++.+++.++.++.+|.+++.+.+ +..-..+. . +...+.++.+.+++.++.++.++.|. +..
T Consensus 200 ~--~~~~~~~~~~~~~~~g~~~~~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~~g~i~-~S~ 276 (327)
T 2xbg_A 200 N--RTTSRRLHNMGFTPDGRLWMIVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGGAGALL-CSQ 276 (327)
T ss_dssp E--CCSSSCEEEEEECTTSCEEEEETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEESTTCEE-EES
T ss_pred C--CCCCCccceeEECCCCCEEEEeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeCCCeEE-EeC
Confidence 2 234567888999888866777788888877423 32222221 1 23458889888877777777778773 333
Q ss_pred CCCeEEEEEe---CCCCcEEEEEE-cCCEEEEEeCCCeEEEEE
Q psy7057 148 TTGKCVHTMY---GHPNFIYSVAA-HGDLITSGGEDQCVCVYQ 186 (557)
Q Consensus 148 ~~~~~~~~~~---~h~~~V~~l~~-~~~~l~s~s~Dg~I~iwd 186 (557)
..++.-..+. .+...++++.+ ++..+++++.+|.|.-++
T Consensus 277 DgG~tW~~~~~~~~~~~~~~~v~~~~~~~~~~~G~~G~i~~~~ 319 (327)
T 2xbg_A 277 DGGQTWQQDVDVKKVPSNFYKILFFSPDQGFILGQKGILLRYV 319 (327)
T ss_dssp STTSSCEECGGGTTSSSCCCEEEEEETTEEEEECSTTEEEEEC
T ss_pred CCCcccEEcCccCCCCCCeEEEEEECCCceEEEcCCceEEEEc
Confidence 4443322232 23456677777 566677888888777665
No 281
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=96.94 E-value=0.1 Score=56.31 Aligned_cols=135 Identities=13% Similarity=0.006 Sum_probs=85.6
Q ss_pred CCcEEEEECCCcEEEEcCCC--------CC---------CCC--CCC------EEEEEE------CCCeEEEEECCCCeE
Q psy7057 23 DGCILSASRDKSAKLWKPND--------LS---------PGA--KVN------TLLSAS------WDMTAKLWCLESQQC 71 (557)
Q Consensus 23 dg~l~sgs~Dg~V~iWd~~~--------~~---------~~~--~~~------~l~sgs------~Dg~i~iwd~~~~~~ 71 (557)
+++++.++.|+.|.-+|..+ +. ..| .+. .+++++ .++.|..+|..+|+.
T Consensus 117 ~~~v~~~t~dg~l~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~ 196 (582)
T 1flg_A 117 GDKVFFGTLDASVVALNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEE 196 (582)
T ss_dssp TTEEEEEETTTEEEEEESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCE
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCE
Confidence 45677888889888888765 10 011 123 566655 378999999999998
Q ss_pred EEEEcccCCcE-----------------------------------------EEEEEcCC-CEEEEEEC-----------
Q psy7057 72 KLTIRQHEMAV-----------------------------------------WGVIQLAN-GIIVTGCA----------- 98 (557)
Q Consensus 72 ~~~l~~h~~~V-----------------------------------------~~l~~~~~-~~l~sgs~----------- 98 (557)
+.+.......+ ..+++.|. +++..++.
T Consensus 197 ~W~~~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~ 276 (582)
T 1flg_A 197 IWMRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWART 276 (582)
T ss_dssp EEEEESSTTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGS
T ss_pred EeecCCCccccccccCcccccccccccccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcccc
Confidence 87654321110 12344554 46666553
Q ss_pred ---------C----CeEEEEe-CCCcEEEEEeC--CC--------CCEEEEEEe-CCC----eEEEEECCCeEEEEECCC
Q psy7057 99 ---------D----KTIKLHS-EEGEFLKTLTG--HT--------DCVRGLAVL-NDT----DFVSCSNDASIRVWDSTT 149 (557)
Q Consensus 99 ---------d----g~I~vwd-~~~~~~~~l~~--h~--------~~V~~l~~~-~~~----~lvs~s~Dg~I~vwd~~~ 149 (557)
| +.|..+| .+|+.+..++. |. .++. +... .++ .++.++.+|.++++|..+
T Consensus 277 ~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~G~l~~lD~~t 355 (582)
T 1flg_A 277 AKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVL-FDYKAKDGKIVKATAHADRNGFFYVVDRSN 355 (582)
T ss_dssp CTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEE-EEEECSSSCEEEEEEEECTTSEEEEEETTT
T ss_pred cCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEE-EeeecCCCCEEEEEEEECCCceEEEEECCC
Confidence 2 5788999 58888877653 32 1222 1221 345 366889999999999999
Q ss_pred CeEEEEEeC
Q psy7057 150 GKCVHTMYG 158 (557)
Q Consensus 150 ~~~~~~~~~ 158 (557)
|+.+..+..
T Consensus 356 G~~lw~~~~ 364 (582)
T 1flg_A 356 GKLQNAFPF 364 (582)
T ss_dssp CCEEEEEES
T ss_pred CCEeccccc
Confidence 998877653
No 282
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=96.93 E-value=0.41 Score=48.81 Aligned_cols=177 Identities=13% Similarity=0.009 Sum_probs=108.2
Q ss_pred cccEEEEEEcCCC-cEE-EEECCCcEEEEcCCC--------------------CCCCCCCCEE-EEEECCCeEEEEECCC
Q psy7057 12 SMDVRSLSVTPDG-CIL-SASRDKSAKLWKPND--------------------LSPGAKVNTL-LSASWDMTAKLWCLES 68 (557)
Q Consensus 12 ~~~V~~l~~spdg-~l~-sgs~Dg~V~iWd~~~--------------------~~~~~~~~~l-~sgs~Dg~i~iwd~~~ 68 (557)
...+..|+|++.+ .|+ +-...+.|+.+++.. ++.+..+..| ++-...+.|.+.+++.
T Consensus 111 ~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g 190 (400)
T 3p5b_L 111 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG 190 (400)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTT
T ss_pred cCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCCC
Confidence 4567889999854 454 444567787777653 2333323333 3444567777887765
Q ss_pred CeEEEEEcccCCcEEEEEEcCC-CEEEEEEC--CCeEEEEeCCCcEEEEEe-CCCCCEEEEEEeCC-CeEE-EEECCCeE
Q psy7057 69 QQCKLTIRQHEMAVWGVIQLAN-GIIVTGCA--DKTIKLHSEEGEFLKTLT-GHTDCVRGLAVLND-TDFV-SCSNDASI 142 (557)
Q Consensus 69 ~~~~~~l~~h~~~V~~l~~~~~-~~l~sgs~--dg~I~vwd~~~~~~~~l~-~h~~~V~~l~~~~~-~~lv-s~s~Dg~I 142 (557)
......+...-.....|++.|. +.|....+ .+.|...+.+|.....+. ..-.....|+++++ +.|. +-+....|
T Consensus 191 ~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I 270 (400)
T 3p5b_L 191 VKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSI 270 (400)
T ss_dssp CSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEE
T ss_pred CceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEE
Confidence 5444444434456789999984 55554443 367888888876655543 23357899999976 5554 55566889
Q ss_pred EEEECCCCeEEEEEeC--CCCcEEEEEEcCC-EEEEEeCCCeEEEEECC
Q psy7057 143 RVWDSTTGKCVHTMYG--HPNFIYSVAAHGD-LITSGGEDQCVCVYQNK 188 (557)
Q Consensus 143 ~vwd~~~~~~~~~~~~--h~~~V~~l~~~~~-~l~s~s~Dg~I~iwd~~ 188 (557)
...|+........... .-.....|++.++ ++++-...+.|..++..
T Consensus 271 ~~~d~dG~~~~~~~~~~~~l~~P~gl~v~~~~lywtd~~~~~V~~~~~~ 319 (400)
T 3p5b_L 271 SSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRL 319 (400)
T ss_dssp EEEETTSCCCEEEEECSSTTSSEEEEEEETTEEEEEESSSCSEEEEESS
T ss_pred EEEeCCCCccEEEEeCCCCCCCCEEEEEeCCEEEEecCCCCeEEEEEcC
Confidence 9999864433222222 2344567777554 55566667788888843
No 283
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=96.84 E-value=0.17 Score=52.29 Aligned_cols=143 Identities=12% Similarity=0.082 Sum_probs=87.5
Q ss_pred CCCCC-CCCEEEEEECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEEC-CC----eEEEEeCCCcEE--E
Q psy7057 43 LSPGA-KVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCA-DK----TIKLHSEEGEFL--K 113 (557)
Q Consensus 43 ~~~~~-~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~-dg----~I~vwd~~~~~~--~ 113 (557)
+++++ +...|..+...+.|+.+|+.++.... +.........+++.+++ .|+.+.. ++ .+.+.+..+... .
T Consensus 142 lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~-~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~~~~~~ 220 (430)
T 3tc9_A 142 LSFDPKNHNHLYLVGEQHPTRLIDFEKEYVST-VYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRESGFKVIT 220 (430)
T ss_dssp EEEETTEEEEEEEEEBTEEEEEEETTTTEEEE-EECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGTSCSEE
T ss_pred EEECCCCCCeEEEEeCCCcEEEEECCCCEEEE-EecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCceeeee
Confidence 55665 34556666555888999988765443 33355678899999988 4555554 22 344444333221 2
Q ss_pred EEeCCCCCEEEEEEeC-CCeEE-EEECCCeEEEEECCCCeEEEEEeC-CCCcEEEEEE--cCC-EEEEEeCCCeEEEEEC
Q psy7057 114 TLTGHTDCVRGLAVLN-DTDFV-SCSNDASIRVWDSTTGKCVHTMYG-HPNFIYSVAA--HGD-LITSGGEDQCVCVYQN 187 (557)
Q Consensus 114 ~l~~h~~~V~~l~~~~-~~~lv-s~s~Dg~I~vwd~~~~~~~~~~~~-h~~~V~~l~~--~~~-~l~s~s~Dg~I~iwd~ 187 (557)
.+.. ......++++| ++.|+ +-..++.|..++..++........ .....+.|++ +++ ++++-...+.|..++.
T Consensus 221 ~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~ 299 (430)
T 3tc9_A 221 ELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDY 299 (430)
T ss_dssp EEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred eecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeC
Confidence 2221 23456788999 67755 444678899999876654222221 2234667888 667 4555567788999874
No 284
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=96.75 E-value=0.49 Score=46.44 Aligned_cols=179 Identities=11% Similarity=-0.002 Sum_probs=104.7
Q ss_pred CCEEEE-EECCCeEEEEECCC----CeEEEEEcccCCcEEEEEEcC-CC-EEEEEECCCeEEEEeCCCcEEEEEe-CCCC
Q psy7057 49 VNTLLS-ASWDMTAKLWCLES----QQCKLTIRQHEMAVWGVIQLA-NG-IIVTGCADKTIKLHSEEGEFLKTLT-GHTD 120 (557)
Q Consensus 49 ~~~l~s-gs~Dg~i~iwd~~~----~~~~~~l~~h~~~V~~l~~~~-~~-~l~sgs~dg~I~vwd~~~~~~~~l~-~h~~ 120 (557)
.+.|+. -...+.|..+++.. ......+...-.....+++.+ .+ ++++-...+.|.+.+..+.....+. ..-.
T Consensus 41 ~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~ 120 (316)
T 1ijq_A 41 SNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGS 120 (316)
T ss_dssp TTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTC
T ss_pred CCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCC
Confidence 344443 34457788888765 122222322224456788875 44 5556567889999998776554443 3345
Q ss_pred CEEEEEEeCC-CeEEEEEC-C-CeEEEEECCCCeEEEEEe-CCCCcEEEEEEc--CCEE-EEEeCCCeEEEEECCCC--c
Q psy7057 121 CVRGLAVLND-TDFVSCSN-D-ASIRVWDSTTGKCVHTMY-GHPNFIYSVAAH--GDLI-TSGGEDQCVCVYQNKAQ--N 191 (557)
Q Consensus 121 ~V~~l~~~~~-~~lvs~s~-D-g~I~vwd~~~~~~~~~~~-~h~~~V~~l~~~--~~~l-~s~s~Dg~I~iwd~~~~--~ 191 (557)
....+++.|. +.++.+.. . +.|...++. ++....+. ..-.....|+++ +..| ++-+..+.|..++.... +
T Consensus 121 ~P~~iavdp~~g~ly~~d~~~~~~I~~~~~d-G~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~ 199 (316)
T 1ijq_A 121 KPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN-GVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRK 199 (316)
T ss_dssp CEEEEEEETTTTEEEEEECSSSCEEEEEETT-SCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE
T ss_pred CcceEEeCCCCCEEEEEccCCCCeEEEEcCC-CCCeEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCceE
Confidence 7899999985 55554443 3 688888875 44333332 233456788884 4454 45556679999997543 3
Q ss_pred eEeeC---CccEEEEEEcCCCc-EEEEEcCCcEEEEecCCCC
Q psy7057 192 SFMIP---AMSVWAVAILPNSD-IVTGSSDGIVRVFSANPDR 229 (557)
Q Consensus 192 ~~~~~---~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~ 229 (557)
.+... ......+++.. +. +++-...+.|..++..+++
T Consensus 200 ~~~~~~~~~~~P~giav~~-~~ly~~d~~~~~V~~~~~~~g~ 240 (316)
T 1ijq_A 200 TILEDEKRLAHPFSLAVFE-DKVFWTDIINEAIFSANRLTGS 240 (316)
T ss_dssp EEEECTTTTSSEEEEEEET-TEEEEEETTTTEEEEEETTTCC
T ss_pred EEeecCCccCCcEEEEEEC-CEEEEEECCCCeEEEEeCCCCc
Confidence 33221 23456777753 44 5555567788888765443
No 285
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=96.72 E-value=0.26 Score=48.70 Aligned_cols=177 Identities=12% Similarity=0.019 Sum_probs=107.8
Q ss_pred cEEEEEEcCC-CcEE-EEECCCcEEEEcCCC-----------------CCCCCCCCEE-EEEECCCeEEEEECCCCeEEE
Q psy7057 14 DVRSLSVTPD-GCIL-SASRDKSAKLWKPND-----------------LSPGAKVNTL-LSASWDMTAKLWCLESQQCKL 73 (557)
Q Consensus 14 ~V~~l~~spd-g~l~-sgs~Dg~V~iWd~~~-----------------~~~~~~~~~l-~sgs~Dg~i~iwd~~~~~~~~ 73 (557)
...+|+|.+. +.|+ +-...+.|..+++.. +++++.+..| ++-...+.|.++++.......
T Consensus 36 ~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~ 115 (318)
T 3sov_A 36 DAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKV 115 (318)
T ss_dssp EEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred ccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEE
Confidence 4567888874 4544 555667788887654 2233223333 333445678888876543333
Q ss_pred EEcccCCcEEEEEEcCC-CEEEEEEC--CCeEEEEeCCCcEEEEEe-CCCCCEEEEEEeCC-CeEE-EEECCCeEEEEEC
Q psy7057 74 TIRQHEMAVWGVIQLAN-GIIVTGCA--DKTIKLHSEEGEFLKTLT-GHTDCVRGLAVLND-TDFV-SCSNDASIRVWDS 147 (557)
Q Consensus 74 ~l~~h~~~V~~l~~~~~-~~l~sgs~--dg~I~vwd~~~~~~~~l~-~h~~~V~~l~~~~~-~~lv-s~s~Dg~I~vwd~ 147 (557)
.+.........+++.|. +.|..... .+.|...+.+|.....+. ..-.....|+++++ +.|. +-+..+.|..+|+
T Consensus 116 l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~ 195 (318)
T 3sov_A 116 LFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNL 195 (318)
T ss_dssp EECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred EEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcC
Confidence 33344556789999985 55555553 577888887776554443 23346789999985 5544 5566788999998
Q ss_pred CCCeEEEEEeCCCCcEEEEEEcCC-EEEEEeCCCeEEEEECCCC
Q psy7057 148 TTGKCVHTMYGHPNFIYSVAAHGD-LITSGGEDQCVCVYQNKAQ 190 (557)
Q Consensus 148 ~~~~~~~~~~~h~~~V~~l~~~~~-~l~s~s~Dg~I~iwd~~~~ 190 (557)
..........+.......++++++ .+++-...+.|..++..+.
T Consensus 196 dG~~~~~~~~~~~~~P~glav~~~~lywtd~~~~~V~~~~~~~G 239 (318)
T 3sov_A 196 DGTNRQAVVKGSLPHPFALTLFEDILYWTDWSTHSILACNKYTG 239 (318)
T ss_dssp TSCSCEEEECSCCSCEEEEEEETTEEEEEETTTTEEEEEETTTC
T ss_pred CCCceEEEecCCCCCceEEEEeCCEEEEEecCCCeEEEEECCCC
Confidence 643322222333455667777554 4556556788888886433
No 286
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=96.68 E-value=1.1 Score=49.62 Aligned_cols=205 Identities=12% Similarity=0.133 Sum_probs=123.8
Q ss_pred ccEEEEEEcCCCcEEEEECCCcEEEEcCCCCCCCC--------------CCCEEEEEECCCeEEEEECCCCeEEEEEc--
Q psy7057 13 MDVRSLSVTPDGCILSASRDKSAKLWKPNDLSPGA--------------KVNTLLSASWDMTAKLWCLESQQCKLTIR-- 76 (557)
Q Consensus 13 ~~V~~l~~spdg~l~sgs~Dg~V~iWd~~~~~~~~--------------~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~-- 76 (557)
..|.++....+|.|..|+.+| +..||..+-.+.. ....|..++.+ -+..++..+++.. .+.
T Consensus 63 ~~i~~i~~d~~g~lWigT~~G-l~~yd~~~~~f~~~~~~~~~~i~~i~~~~g~lWigt~~-Gl~~~~~~~~~~~-~~~~~ 139 (758)
T 3ott_A 63 TRIYCGVIIDNTYLYMGTDNG-ILVYNYRADRYEQPETDFPTDVRTMALQGDTLWLGALN-GLYTYQLQSRKLT-SFDTR 139 (758)
T ss_dssp SCEEEEEEETTTEEEEEETTE-EEEEETTTTEECCCSCCCCSCEEEEEEETTEEEEEETT-EEEEEETTTCCEE-EECHH
T ss_pred ceEEEEEEcCCCcEEEEeCCC-eEEEeCCCCEEECcccCCCceEEEEEecCCcEEEEcCC-cceeEeCCCCeEE-EeccC
Confidence 569999888888888888766 6788876511100 12334445554 5677787665433 231
Q ss_pred ---ccCCcEEEEEEcCCCEEEEEECCCeEEEEeCCCcEEEEEeCC------CCCEEEEEEeCCC-eEEEEECCCeEEEEE
Q psy7057 77 ---QHEMAVWGVIQLANGIIVTGCADKTIKLHSEEGEFLKTLTGH------TDCVRGLAVLNDT-DFVSCSNDASIRVWD 146 (557)
Q Consensus 77 ---~h~~~V~~l~~~~~~~l~sgs~dg~I~vwd~~~~~~~~l~~h------~~~V~~l~~~~~~-~lvs~s~Dg~I~vwd 146 (557)
.....|.++....++.|..|+.+| +..++........+... ...|.++...+++ .|..|+. +-+..+|
T Consensus 140 ~~~l~~~~i~~i~~d~~g~lWigt~~G-l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~ 217 (758)
T 3ott_A 140 RNGLPNNTIYSIIRTKDNQIYVGTYNG-LCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYF 217 (758)
T ss_dssp HHCCSCSCEEEEEECTTCCEEEEETTE-EEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEE
T ss_pred CCCcCCCeEEEEEEcCCCCEEEEeCCC-HhhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEEC-CCCeEEc
Confidence 123568888888888777777654 66777544443333211 1248888887764 4555554 4588899
Q ss_pred CCCCeEEEEEeCCCCcEEEEEEc-CCEEEEEeCCCeEEEEECCCC--ceEe--------eCCccEEEEEEcCCCcEEEEE
Q psy7057 147 STTGKCVHTMYGHPNFIYSVAAH-GDLITSGGEDQCVCVYQNKAQ--NSFM--------IPAMSVWAVAILPNSDIVTGS 215 (557)
Q Consensus 147 ~~~~~~~~~~~~h~~~V~~l~~~-~~~l~s~s~Dg~I~iwd~~~~--~~~~--------~~~~~v~~v~~~p~g~l~sg~ 215 (557)
..+++...........|.++..+ ...|..|+.+ -+.+++..+. ..+. .....|+++....+|.|-.|+
T Consensus 218 ~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWiGT 296 (758)
T 3ott_A 218 PSTGQIKQTEAFHNNSIKSLALDGNGDLLAGTDN-GLYVYHNDTTPLQHIIHDSRNIQSLTNNIIWNIFADQEHNIWLGT 296 (758)
T ss_dssp TTTTEEEEEEEEEEEEEEEEEECTTCCEEEEETT-EEEEECCTTSCCEEECCCTTCTTSCSCSCEEEEEECTTCCEEEEE
T ss_pred CCCCeEEeccCCCCCeEEEEEEcCCCCEEEEeCC-ceeEEecCCCcEEEEEcCCCCcCcCCcCeEEEEEEcCCCCEEEEe
Confidence 77765432211123467888773 3346666654 4777875543 2222 123468999988888888888
Q ss_pred cCCcEEEEe
Q psy7057 216 SDGIVRVFS 224 (557)
Q Consensus 216 ~Dg~I~iwd 224 (557)
..| +.++.
T Consensus 297 ~~G-l~~~~ 304 (758)
T 3ott_A 297 DYG-ISLSR 304 (758)
T ss_dssp SSS-EEEEC
T ss_pred CCc-ccccc
Confidence 777 55443
No 287
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=96.66 E-value=0.03 Score=59.90 Aligned_cols=158 Identities=11% Similarity=0.020 Sum_probs=103.1
Q ss_pred cEEEEEecc-CcccEEEEEE-c-CCCc-EEEEE------------------CCCcEEEEcCCC---------------CC
Q psy7057 2 YKLSTALYG-HSMDVRSLSV-T-PDGC-ILSAS------------------RDKSAKLWKPND---------------LS 44 (557)
Q Consensus 2 ~kl~~~l~g-H~~~V~~l~~-s-pdg~-l~sgs------------------~Dg~V~iWd~~~---------------~~ 44 (557)
+++.+.+.- .......+++ + |++. ++.++ .++.+.+.|..+ +.
T Consensus 122 ~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~~qI~Vgg~pd~~~ 201 (595)
T 1fwx_A 122 MKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEVAWQVLVSGNLDNCD 201 (595)
T ss_dssp TEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEEEEEEEESSCCCCEE
T ss_pred ceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEECCCCeEEEEEEeCCCccceE
Confidence 455553322 1235778887 4 7877 55553 245677777776 55
Q ss_pred CCCCCCEEEEEECCC--------------------------------------eEEEEECCC--CeE-EEEEcccCCcEE
Q psy7057 45 PGAKVNTLLSASWDM--------------------------------------TAKLWCLES--QQC-KLTIRQHEMAVW 83 (557)
Q Consensus 45 ~~~~~~~l~sgs~Dg--------------------------------------~i~iwd~~~--~~~-~~~l~~h~~~V~ 83 (557)
.++++.++++.+.+. .|.+.|..+ ++. +..+.. .....
T Consensus 202 ~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipv-g~~Ph 280 (595)
T 1fwx_A 202 ADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPI-ANNPH 280 (595)
T ss_dssp ECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEEE-ESSCC
T ss_pred ECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCceeEEEEec-CCCce
Confidence 667788888887553 366777766 433 344432 22445
Q ss_pred EEEEcCCC--EEEEEECCCeEEEEeCCCc-------------EEEEEeCCCCCEEEEEEeCCCe-EEEEECCCeEEEEEC
Q psy7057 84 GVIQLANG--IIVTGCADKTIKLHSEEGE-------------FLKTLTGHTDCVRGLAVLNDTD-FVSCSNDASIRVWDS 147 (557)
Q Consensus 84 ~l~~~~~~--~l~sgs~dg~I~vwd~~~~-------------~~~~l~~h~~~V~~l~~~~~~~-lvs~s~Dg~I~vwd~ 147 (557)
++.++||| .++++..+.+|.++|.... ....+ .-....+.++|+++|. +++.-.|+.|.+||+
T Consensus 281 Gv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v-~vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi 359 (595)
T 1fwx_A 281 GCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEP-ELGLGPLHTAFDGRGNAYTSLFLDSQVVKWNI 359 (595)
T ss_dssp CEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECC-BCCSCEEEEEECTTSEEEEEETTTTEEEEEEH
T ss_pred EEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEc-CCCCCcceEEECCCCeEEEEEecCCcEEEEEh
Confidence 78999999 5666667899999995422 22333 2345689999999996 347778999999998
Q ss_pred CC----------CeEEEEEeCCCC
Q psy7057 148 TT----------GKCVHTMYGHPN 161 (557)
Q Consensus 148 ~~----------~~~~~~~~~h~~ 161 (557)
.+ .+.+.++.-|-.
T Consensus 360 ~~a~~~~~g~~~~~vi~kidV~yq 383 (595)
T 1fwx_A 360 EDAIRAYAGEKVDPIKDKLDVHYQ 383 (595)
T ss_dssp HHHHHHHHTCSCCCEEEEEECSSC
T ss_pred hHhhhhhcccccceeEEEeecccc
Confidence 76 556777765543
No 288
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=96.64 E-value=0.74 Score=51.09 Aligned_cols=208 Identities=11% Similarity=0.098 Sum_probs=127.6
Q ss_pred cccEEEEEEcCCCcEEEEECCCcEEEEcCCCC-----------------CCCCCCCEEEEEECCCeEEEEECCCCeEEEE
Q psy7057 12 SMDVRSLSVTPDGCILSASRDKSAKLWKPNDL-----------------SPGAKVNTLLSASWDMTAKLWCLESQQCKLT 74 (557)
Q Consensus 12 ~~~V~~l~~spdg~l~sgs~Dg~V~iWd~~~~-----------------~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~ 74 (557)
...|+||.-..+|.|..|..+|.. .||-..+ ... ....|..|+.+| +..||..+.+....
T Consensus 21 ~n~V~~I~qD~~G~lWigT~~GL~-ryDG~~~~~~~~~~~~~~~~i~~i~~d-~~g~lWigT~~G-l~~yd~~~~~f~~~ 97 (758)
T 3ott_A 21 ASVVSCFLQDSEGLIWIGSNKGLF-SYDGYSTQQHFTYGENNNTRIYCGVII-DNTYLYMGTDNG-ILVYNYRADRYEQP 97 (758)
T ss_dssp CCCEEEEEECTTSCEEEEESSCEE-EECSSCEEECSCTTSTTSSCEEEEEEE-TTTEEEEEETTE-EEEEETTTTEECCC
T ss_pred cceEEEEEECCCCCEEEEECCCcc-ccCCCceEEEEccCCCCCceEEEEEEc-CCCcEEEEeCCC-eEEEeCCCCEEECc
Confidence 467999999999998888887744 4553220 111 123566666554 67888877543221
Q ss_pred EcccCCcEEEEEEcCCCEEEEEECCCeEEEEeCCCcEEEEEe-----CCCCCEEEEEEeCCCeEEEEECCCeEEEEECCC
Q psy7057 75 IRQHEMAVWGVIQLANGIIVTGCADKTIKLHSEEGEFLKTLT-----GHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTT 149 (557)
Q Consensus 75 l~~h~~~V~~l~~~~~~~l~sgs~dg~I~vwd~~~~~~~~l~-----~h~~~V~~l~~~~~~~lvs~s~Dg~I~vwd~~~ 149 (557)
.......|.++.. .++.|..|+.+ -+..++........+. .....|.++....++.+..++.. -|..++..+
T Consensus 98 ~~~~~~~i~~i~~-~~g~lWigt~~-Gl~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt~~-Gl~~~~~~~ 174 (758)
T 3ott_A 98 ETDFPTDVRTMAL-QGDTLWLGALN-GLYTYQLQSRKLTSFDTRRNGLPNNTIYSIIRTKDNQIYVGTYN-GLCRYIPSN 174 (758)
T ss_dssp SCCCCSCEEEEEE-ETTEEEEEETT-EEEEEETTTCCEEEECHHHHCCSCSCEEEEEECTTCCEEEEETT-EEEEEETTT
T ss_pred ccCCCceEEEEEe-cCCcEEEEcCC-cceeEeCCCCeEEEeccCCCCcCCCeEEEEEEcCCCCEEEEeCC-CHhhCccCC
Confidence 1112335777754 46777777776 5777885444444441 12356889888888887777765 477788766
Q ss_pred CeEEEEEeCC------CCcEEEEEEc--CCEEEEEeCCCeEEEEECCCC--ceEe-eCCccEEEEEEcCCCcEEEEEcCC
Q psy7057 150 GKCVHTMYGH------PNFIYSVAAH--GDLITSGGEDQCVCVYQNKAQ--NSFM-IPAMSVWAVAILPNSDIVTGSSDG 218 (557)
Q Consensus 150 ~~~~~~~~~h------~~~V~~l~~~--~~~l~s~s~Dg~I~iwd~~~~--~~~~-~~~~~v~~v~~~p~g~l~sg~~Dg 218 (557)
++.. .+... ...|.++..+ +..|..|+. +-+..++..+. ..+. .....|.++...++|.|..|+.+|
T Consensus 175 ~~~~-~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~~G 252 (758)
T 3ott_A 175 GKFE-GIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPSTGQIKQTEAFHNNSIKSLALDGNGDLLAGTDNG 252 (758)
T ss_dssp TEEE-EECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEETTTTEEEEEEEEEEEEEEEEEECTTCCEEEEETTE
T ss_pred CceE-EecCCCccccccceeEEEEEECCCCEEEEEEC-CCCeEEcCCCCeEEeccCCCCCeEEEEEEcCCCCEEEEeCCc
Confidence 6533 22211 2348888774 455666664 45778886554 2221 123458888888888888787554
Q ss_pred cEEEEecCCC
Q psy7057 219 IVRVFSANPD 228 (557)
Q Consensus 219 ~I~iwd~~~~ 228 (557)
+.+++..+.
T Consensus 253 -l~~~~~~~~ 261 (758)
T 3ott_A 253 -LYVYHNDTT 261 (758)
T ss_dssp -EEEECCTTS
T ss_pred -eeEEecCCC
Confidence 777876654
No 289
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=96.63 E-value=0.24 Score=51.18 Aligned_cols=211 Identities=11% Similarity=0.033 Sum_probs=116.2
Q ss_pred cEEEEEEcCC---CcEEEEECCCcEEEEcCCC---------------CCCCCCCCEEEEEECCC----e-EEEEECCCCe
Q psy7057 14 DVRSLSVTPD---GCILSASRDKSAKLWKPND---------------LSPGAKVNTLLSASWDM----T-AKLWCLESQQ 70 (557)
Q Consensus 14 ~V~~l~~spd---g~l~sgs~Dg~V~iWd~~~---------------~~~~~~~~~l~sgs~Dg----~-i~iwd~~~~~ 70 (557)
.-..|+|+|+ +.|+.+...+.|+.+++.+ ++++++++ |+.+...+ . +...+...+.
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~~~~ 218 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTTNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRASGF 218 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEECCCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGGGTT
T ss_pred CCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEeecCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEECCCCe
Confidence 4568999985 6677665558899998854 44555666 33333211 1 2222221111
Q ss_pred E-EEEEcccCCcEEEEEEcC-CCE-EEEEECCCeEEEEeCC-CcEEEEEe--CCCCCEEEEEEeCCCe-EE-EEECCCeE
Q psy7057 71 C-KLTIRQHEMAVWGVIQLA-NGI-IVTGCADKTIKLHSEE-GEFLKTLT--GHTDCVRGLAVLNDTD-FV-SCSNDASI 142 (557)
Q Consensus 71 ~-~~~l~~h~~~V~~l~~~~-~~~-l~sgs~dg~I~vwd~~-~~~~~~l~--~h~~~V~~l~~~~~~~-lv-s~s~Dg~I 142 (557)
. ...+. .-.....+++.| ++. +++-..++.|+.++.. +.....+. +....-..|+++|++. |+ +-.....|
T Consensus 219 ~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I 297 (433)
T 4hw6_A 219 TERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCI 297 (433)
T ss_dssp CCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEE
T ss_pred ecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEE
Confidence 0 01111 223345678888 664 4454567789999865 55423322 1222345799999976 44 55567889
Q ss_pred EEEECC--CCeE--EEEEeCC---------------CCcEEEEEE---------cC--CEEEEEeCCCeEEEEECCCC-c
Q psy7057 143 RVWDST--TGKC--VHTMYGH---------------PNFIYSVAA---------HG--DLITSGGEDQCVCVYQNKAQ-N 191 (557)
Q Consensus 143 ~vwd~~--~~~~--~~~~~~h---------------~~~V~~l~~---------~~--~~l~s~s~Dg~I~iwd~~~~-~ 191 (557)
+.++.. ++.. ...+.+. -.....+++ +. .++++-...++|+.++.... .
T Consensus 298 ~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~~G~v~ 377 (433)
T 4hw6_A 298 YRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTPEGRVT 377 (433)
T ss_dssp EEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECTTSEEE
T ss_pred EEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECCCCCEE
Confidence 998754 2321 1222221 112456776 33 34555556678888884322 2
Q ss_pred eEeeC------------------CccEEEEEEc-CCCcEEEEE-cCCcEEEEecC
Q psy7057 192 SFMIP------------------AMSVWAVAIL-PNSDIVTGS-SDGIVRVFSAN 226 (557)
Q Consensus 192 ~~~~~------------------~~~v~~v~~~-p~g~l~sg~-~Dg~I~iwd~~ 226 (557)
.+.+. -.....|++. +++.|+.+. ..+.||.++++
T Consensus 378 t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 378 TYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp EEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred EEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 22211 1236789999 667755444 56778887754
No 290
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=96.50 E-value=0.41 Score=49.44 Aligned_cols=181 Identities=14% Similarity=0.047 Sum_probs=105.1
Q ss_pred CCCCCC--CCEEEEEECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCCCEEEEEECCC----e-EEEEeCCCcEE--E
Q psy7057 43 LSPGAK--VNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADK----T-IKLHSEEGEFL--K 113 (557)
Q Consensus 43 ~~~~~~--~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~~l~sgs~dg----~-I~vwd~~~~~~--~ 113 (557)
+.++++ ...|+.+...+.|+.+++.++.... +........++++.+++.|+.+...+ . +...+..+... .
T Consensus 144 vavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~-~~~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~~~~~~ 222 (433)
T 4hw6_A 144 MMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDI-KTTNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASGFTERL 222 (433)
T ss_dssp EEECTTTTTCEEEEECBTSCEEEEETTTTEEEE-ECCCCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGTTCCEE
T ss_pred EEEccccCCCEEEEEeCCCCEEEEECCCCEEEE-eecCCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCCeeccc
Confidence 556653 4555555544889999987776543 44455678899999988444444321 2 33333221111 1
Q ss_pred EEeCCCCCEEEEEEeC-CCeEE-EEECCCeEEEEECCCCeEEEEEeC--CCCcEEEEEE--cCC-EEEEEeCCCeEEEEE
Q psy7057 114 TLTGHTDCVRGLAVLN-DTDFV-SCSNDASIRVWDSTTGKCVHTMYG--HPNFIYSVAA--HGD-LITSGGEDQCVCVYQ 186 (557)
Q Consensus 114 ~l~~h~~~V~~l~~~~-~~~lv-s~s~Dg~I~vwd~~~~~~~~~~~~--h~~~V~~l~~--~~~-~l~s~s~Dg~I~iwd 186 (557)
.+. .-.....++++| ++.|. +-..++.|+.+|..++.....+.. ....-..|++ +++ ++++-...+.|+.++
T Consensus 223 ~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~ 301 (433)
T 4hw6_A 223 SLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVD 301 (433)
T ss_dssp EEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred ccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEe
Confidence 121 233456788888 67766 444667899999877766333321 1222345777 566 455555678999987
Q ss_pred CCC--C-----ceEeeC---------------CccEEEEEE---------cCCCcEEEE-EcCCcEEEEec
Q psy7057 187 NKA--Q-----NSFMIP---------------AMSVWAVAI---------LPNSDIVTG-SSDGIVRVFSA 225 (557)
Q Consensus 187 ~~~--~-----~~~~~~---------------~~~v~~v~~---------~p~g~l~sg-~~Dg~I~iwd~ 225 (557)
... . ..+.+. -.....+++ .+++.|..+ ...+.|+.++.
T Consensus 302 ~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~ 372 (433)
T 4hw6_A 302 YNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP 372 (433)
T ss_dssp BCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT
T ss_pred CCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC
Confidence 431 1 122221 123567888 666775544 45678888875
No 291
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=96.49 E-value=0.11 Score=56.11 Aligned_cols=181 Identities=12% Similarity=0.075 Sum_probs=114.5
Q ss_pred CCEEEEEEC-CCeEEEEEC-CCCeEEEEEcccCCc-----------EEEEEEcC-CCE----EEEEECCCeEEEEe-CCC
Q psy7057 49 VNTLLSASW-DMTAKLWCL-ESQQCKLTIRQHEMA-----------VWGVIQLA-NGI----IVTGCADKTIKLHS-EEG 109 (557)
Q Consensus 49 ~~~l~sgs~-Dg~i~iwd~-~~~~~~~~l~~h~~~-----------V~~l~~~~-~~~----l~sgs~dg~I~vwd-~~~ 109 (557)
+..++.++. ++.|.-+|. .+|+.+.++...... ...+++.| ++. |+.++.|+.+..+| .+|
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG 141 (599)
T 1w6s_A 62 DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAETG 141 (599)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTTC
T ss_pred CCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECCCC
Confidence 567788887 899999999 899998887643211 12244433 335 88899999999999 688
Q ss_pred cEEEEEeCCC----CCEEE-EEEeCCCeEEEEE------CCCeEEEEECCCCeEEEEEeCCCCc----------------
Q psy7057 110 EFLKTLTGHT----DCVRG-LAVLNDTDFVSCS------NDASIRVWDSTTGKCVHTMYGHPNF---------------- 162 (557)
Q Consensus 110 ~~~~~l~~h~----~~V~~-l~~~~~~~lvs~s------~Dg~I~vwd~~~~~~~~~~~~h~~~---------------- 162 (557)
+.+....... ..+.+ -.+ .++.++.++ .++.|+-+|.++|+.+-++......
T Consensus 142 ~~~W~~~~~~~~~~~~~~ssP~v-~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~ 220 (599)
T 1w6s_A 142 ETVWKVENSDIKVGSTLTIAPYV-VKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPHY 220 (599)
T ss_dssp CEEEEEECCCGGGTCBCCSCCEE-ETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGG
T ss_pred CEEEeecCCCCCccceeecCCEE-ECCEEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCccccccccccccccccc
Confidence 8877654322 12221 112 246666554 3899999999999998877643211
Q ss_pred ---------------------EE-EEEE--cCCEEEEEeCC----------------CeEEEEECCCCceE---ee--CC
Q psy7057 163 ---------------------IY-SVAA--HGDLITSGGED----------------QCVCVYQNKAQNSF---MI--PA 197 (557)
Q Consensus 163 ---------------------V~-~l~~--~~~~l~s~s~D----------------g~I~iwd~~~~~~~---~~--~~ 197 (557)
++ .+++ ....++.++.+ +.|..+|..+.+.. +. |.
T Consensus 221 g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d 300 (599)
T 1w6s_A 221 GQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHD 300 (599)
T ss_dssp CCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTC
T ss_pred cccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCc
Confidence 11 2233 44566666554 37888887766322 11 11
Q ss_pred --------ccEEEEEEc-CCC---c-EEEEEcCCcEEEEecCCCCcc
Q psy7057 198 --------MSVWAVAIL-PNS---D-IVTGSSDGIVRVFSANPDRQA 231 (557)
Q Consensus 198 --------~~v~~v~~~-p~g---~-l~sg~~Dg~I~iwd~~~~~~~ 231 (557)
.++. +... .+| . ++.++.+|.++++|..+++.+
T Consensus 301 ~wd~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l 346 (599)
T 1w6s_A 301 EWDYAGVNVMML-SEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALV 346 (599)
T ss_dssp SSCCCCCCCCEE-EEEECTTSCEEEEEEEECTTSEEEEEETTTCCEE
T ss_pred cccccCCCccEE-EeccccCCcEEEEEEEECCCcEEEEEECCCCCEe
Confidence 1121 2222 456 4 566889999999999888754
No 292
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=96.47 E-value=1.1 Score=50.13 Aligned_cols=174 Identities=10% Similarity=-0.035 Sum_probs=106.7
Q ss_pred ECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcC-CC-EEEEEECCCeEEEEeCCCc-----EEEEEeCCCCCEEEEEEe
Q psy7057 56 SWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLA-NG-IIVTGCADKTIKLHSEEGE-----FLKTLTGHTDCVRGLAVL 128 (557)
Q Consensus 56 s~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~-~~-~l~sgs~dg~I~vwd~~~~-----~~~~l~~h~~~V~~l~~~ 128 (557)
+....|+..++........+. ....+..|++.+ .+ ++++-...+.|+.+++.+. ....+.........|++.
T Consensus 401 an~~~Ir~i~l~~~~~~~l~~-~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD 479 (791)
T 3m0c_C 401 TNRHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVD 479 (791)
T ss_dssp ECBSSEEEECTTSCCCEEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEE
T ss_pred ccccceeEeeccCCcceeeec-CCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeee
Confidence 345567888877655444343 455677899988 44 5555556678888886652 223333344567789988
Q ss_pred CCC-e-EEEEECCCeEEEEECCCCeEEEEEeCCCCcEEEEEEcC--CEEEEEe-CC-CeEEEEECCCC-c-eEee-CCcc
Q psy7057 129 NDT-D-FVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAAHG--DLITSGG-ED-QCVCVYQNKAQ-N-SFMI-PAMS 199 (557)
Q Consensus 129 ~~~-~-lvs~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~~~--~~l~s~s-~D-g~I~iwd~~~~-~-~~~~-~~~~ 199 (557)
+.+ . +++-...+.|.+.++........+...-.....|+++. ..|+... .. +.|...++... . .+.. .-..
T Consensus 480 ~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~ 559 (791)
T 3m0c_C 480 WIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQW 559 (791)
T ss_dssp TTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSC
T ss_pred ecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCC
Confidence 664 4 44666778999999875443333333445678888843 3444443 33 67888886544 2 2222 2246
Q ss_pred EEEEEEcCCCc-EEEE-EcCCcEEEEecCCCCc
Q psy7057 200 VWAVAILPNSD-IVTG-SSDGIVRVFSANPDRQ 230 (557)
Q Consensus 200 v~~v~~~p~g~-l~sg-~~Dg~I~iwd~~~~~~ 230 (557)
...|++.+.+. |+.+ ...+.|..++++....
T Consensus 560 P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~ 592 (791)
T 3m0c_C 560 PNGITLDLLSGRLYWVDSKLHSISSIDVNGGNR 592 (791)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTSCSC
T ss_pred ceEEEEecCCCeEEEEeCCCCcEEEEecCCCce
Confidence 88999997655 5444 4567788888875443
No 293
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=96.38 E-value=0.46 Score=47.62 Aligned_cols=202 Identities=13% Similarity=0.023 Sum_probs=109.2
Q ss_pred ccEEEEEEcCCCcEEEEECCCcEEEEcCCC-------------------CCCCCC---CCEEEEEEC----C----CeEE
Q psy7057 13 MDVRSLSVTPDGCILSASRDKSAKLWKPND-------------------LSPGAK---VNTLLSASW----D----MTAK 62 (557)
Q Consensus 13 ~~V~~l~~spdg~l~sgs~Dg~V~iWd~~~-------------------~~~~~~---~~~l~sgs~----D----g~i~ 62 (557)
..-++|+|.|+|+|+.+..+|.|++++... ++++++ +..|..+.. + ..|.
T Consensus 29 ~~P~~ia~~pdG~l~V~e~~g~I~~~d~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~ 108 (354)
T 3a9g_A 29 EVPWSIAPLGGGRYLVTERPGRLVLISPSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVI 108 (354)
T ss_dssp SCEEEEEEEETTEEEEEETTTEEEEECSSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEE
T ss_pred CCCeEEEEcCCCeEEEEeCCCEEEEEeCCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEE
Confidence 456899999999988888889999886321 344444 344444332 2 5666
Q ss_pred EEECCCC-------eEEE-EEcc-cCCcEEEEEEcCCC-EEEEEEC-------------CCeEEEEeCCCcE--------
Q psy7057 63 LWCLESQ-------QCKL-TIRQ-HEMAVWGVIQLANG-IIVTGCA-------------DKTIKLHSEEGEF-------- 111 (557)
Q Consensus 63 iwd~~~~-------~~~~-~l~~-h~~~V~~l~~~~~~-~l~sgs~-------------dg~I~vwd~~~~~-------- 111 (557)
.|+.... +.+. .+.. .......++|.|+| ++++-+. .+.|..++.++..
T Consensus 109 r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~npf~~ 188 (354)
T 3a9g_A 109 RGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNPFPN 188 (354)
T ss_dssp EEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSSSTT
T ss_pred EEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCCCCC
Confidence 6776543 1111 1221 11234578999999 4443221 2456666655431
Q ss_pred -EEEEeCCCCCEEEEEEeC-CCeEEEEECCC----eEEEEECCC--------C--------eEEEEEeCCCCcEEEEEE-
Q psy7057 112 -LKTLTGHTDCVRGLAVLN-DTDFVSCSNDA----SIRVWDSTT--------G--------KCVHTMYGHPNFIYSVAA- 168 (557)
Q Consensus 112 -~~~l~~h~~~V~~l~~~~-~~~lvs~s~Dg----~I~vwd~~~--------~--------~~~~~~~~h~~~V~~l~~- 168 (557)
.....+|. ....++|+| ++.|.++.... .|.+..... + .++..+.........+++
T Consensus 189 ~~i~a~G~r-np~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~ap~G~~~y 267 (354)
T 3a9g_A 189 SPIWSYGHR-NPQGIDWHRASGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDPVIDTGSETWAPSGASFV 267 (354)
T ss_dssp CCEEEECCS-CCCEEEECTTTCCEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTCCCCEEEEEEC
T ss_pred CcEEEEccC-CcceEEEeCCCCCEEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCCEeecCCCCcCCcceEEE
Confidence 11223443 356789999 57766554332 243332100 0 122233112234566666
Q ss_pred --------cCCEEEEEeCCCeEEEEECCCC-c-----eEe-eCCccEEEEEEcCCCcEEEEE
Q psy7057 169 --------HGDLITSGGEDQCVCVYQNKAQ-N-----SFM-IPAMSVWAVAILPNSDIVTGS 215 (557)
Q Consensus 169 --------~~~~l~s~s~Dg~I~iwd~~~~-~-----~~~-~~~~~v~~v~~~p~g~l~sg~ 215 (557)
++.++++.-..+.|...++... . .+. .....+..+++.|+|.|..+.
T Consensus 268 ~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG~lyv~~ 329 (354)
T 3a9g_A 268 HGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDGGILIST 329 (354)
T ss_dssp CSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTTSCEEEEE
T ss_pred CCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCCCcEEEEE
Confidence 3455666566678888876532 1 111 113468888999988855444
No 294
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=96.35 E-value=0.036 Score=60.77 Aligned_cols=202 Identities=11% Similarity=0.091 Sum_probs=106.1
Q ss_pred cEEEEEEcCCCc-EEEEE-CCCcEEEEcCCC-----------------CCCCCCCCEEEEEE-CC-----CeEEEEECCC
Q psy7057 14 DVRSLSVTPDGC-ILSAS-RDKSAKLWKPND-----------------LSPGAKVNTLLSAS-WD-----MTAKLWCLES 68 (557)
Q Consensus 14 ~V~~l~~spdg~-l~sgs-~Dg~V~iWd~~~-----------------~~~~~~~~~l~sgs-~D-----g~i~iwd~~~ 68 (557)
...++++..+++ ++.|+ .+..+.+||..+ ....+++..++.|+ .+ ..+.+||+.+
T Consensus 244 ~~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t 323 (656)
T 1k3i_A 244 FCPGISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSS 323 (656)
T ss_dssp SSCEEEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTT
T ss_pred ccccccCCCCCCEEEeCCCCCCceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCC
Confidence 344577788888 55666 456899999765 11223677888888 44 5689999987
Q ss_pred CeEEEEEcc-----cCCcEEEEEEcCCC-EEEEEECC---------CeEEEEeCCC-cEEEEEeCCC---------CCEE
Q psy7057 69 QQCKLTIRQ-----HEMAVWGVIQLANG-IIVTGCAD---------KTIKLHSEEG-EFLKTLTGHT---------DCVR 123 (557)
Q Consensus 69 ~~~~~~l~~-----h~~~V~~l~~~~~~-~l~sgs~d---------g~I~vwd~~~-~~~~~l~~h~---------~~V~ 123 (557)
.+-.. +.. ....-....+..++ .++.|+.+ ..+..||... ........+. ..-.
T Consensus 324 ~~W~~-~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~ 402 (656)
T 1k3i_A 324 KTWTS-LPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGN 402 (656)
T ss_dssp TEEEE-ETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCE
T ss_pred Cccee-CCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCc
Confidence 65332 210 00000001111233 44445444 4566777332 2222221111 1234
Q ss_pred EEEEeC-CCe-EEEEECCC-----------eEEEEECCCCeEEEEE--eCCCCc--EEEEEE-cCCEEEEEeCC------
Q psy7057 124 GLAVLN-DTD-FVSCSNDA-----------SIRVWDSTTGKCVHTM--YGHPNF--IYSVAA-HGDLITSGGED------ 179 (557)
Q Consensus 124 ~l~~~~-~~~-lvs~s~Dg-----------~I~vwd~~~~~~~~~~--~~h~~~--V~~l~~-~~~~l~s~s~D------ 179 (557)
++.+.. +++ ++.|+.++ .|.+||..+.+-.... ..+... ..++.. ++++++.|+.+
T Consensus 403 av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~ 482 (656)
T 1k3i_A 403 AVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFE 482 (656)
T ss_dssp EEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTC
T ss_pred eEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcC
Confidence 444433 566 44666432 6788888776544332 112222 233444 78888888754
Q ss_pred -----CeEEEEECCCC--ceEe---eCCccEEEEEEcCCCc-EEEEEc
Q psy7057 180 -----QCVCVYQNKAQ--NSFM---IPAMSVWAVAILPNSD-IVTGSS 216 (557)
Q Consensus 180 -----g~I~iwd~~~~--~~~~---~~~~~v~~v~~~p~g~-l~sg~~ 216 (557)
..+.+||..+. ..+. .+.....+..+.|+++ ++.||.
T Consensus 483 ~~~~~~~v~~ydp~t~~W~~~~~~~~~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 483 DSTPVFTPEIYVPEQDTFYKQNPNSIVRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp CCSBCCCCEEEEGGGTEEEECCCCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred CCCcccceEEEcCCCCceeecCCCCCccccccHhhcCCCcEEEecCCC
Confidence 46889996554 2221 1112233455678998 566664
No 295
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=96.21 E-value=1.1 Score=50.07 Aligned_cols=177 Identities=13% Similarity=0.008 Sum_probs=108.1
Q ss_pred cccEEEEEEcCC-CcEE-EEECCCcEEEEcCCC--------------------CCCCCCCCEEE-EEECCCeEEEEECCC
Q psy7057 12 SMDVRSLSVTPD-GCIL-SASRDKSAKLWKPND--------------------LSPGAKVNTLL-SASWDMTAKLWCLES 68 (557)
Q Consensus 12 ~~~V~~l~~spd-g~l~-sgs~Dg~V~iWd~~~--------------------~~~~~~~~~l~-sgs~Dg~i~iwd~~~ 68 (557)
...+..|+|.+. ++|+ +-...+.|+.+++.. ++++..+..|+ +-...+.|.+.++..
T Consensus 423 ~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG 502 (791)
T 3m0c_C 423 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG 502 (791)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCC
Confidence 345678899874 4544 555567777777642 33443444444 444567888888875
Q ss_pred CeEEEEEcccCCcEEEEEEcCC-CEEEEEEC-C-CeEEEEeCCCcEEEEEeC-CCCCEEEEEEeCC-CeEE-EEECCCeE
Q psy7057 69 QQCKLTIRQHEMAVWGVIQLAN-GIIVTGCA-D-KTIKLHSEEGEFLKTLTG-HTDCVRGLAVLND-TDFV-SCSNDASI 142 (557)
Q Consensus 69 ~~~~~~l~~h~~~V~~l~~~~~-~~l~sgs~-d-g~I~vwd~~~~~~~~l~~-h~~~V~~l~~~~~-~~lv-s~s~Dg~I 142 (557)
......+...-.....|++.|. +.|....+ . +.|...++.|.....+.. .-.....|++.+. ++|+ +-.....|
T Consensus 503 ~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I 582 (791)
T 3m0c_C 503 VKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSI 582 (791)
T ss_dssp SSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEE
T ss_pred CeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcE
Confidence 5443334344556889999986 55555543 2 678888888877666543 3357899999965 5555 44556789
Q ss_pred EEEECCCCeEEEEEeC--CCCcEEEEEEcCCEE-EEEeCCCeEEEEECC
Q psy7057 143 RVWDSTTGKCVHTMYG--HPNFIYSVAAHGDLI-TSGGEDQCVCVYQNK 188 (557)
Q Consensus 143 ~vwd~~~~~~~~~~~~--h~~~V~~l~~~~~~l-~s~s~Dg~I~iwd~~ 188 (557)
...++........+.. .-....+|++.++.| ++-...+.|...+..
T Consensus 583 ~~~d~dG~~~~~v~~~~~~l~~P~glav~~~~lYwtD~~~~~I~~~dk~ 631 (791)
T 3m0c_C 583 SSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRL 631 (791)
T ss_dssp EEEETTSCSCEEEEECTTTTSSEEEEEEETTEEEEEETTTTEEEEEETT
T ss_pred EEEecCCCceEEEecCCCccCCCCEEEEeCCEEEEEECCCCEEEEEeCC
Confidence 9999864433333332 223455777755544 444566777777743
No 296
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=96.19 E-value=0.15 Score=56.87 Aligned_cols=178 Identities=10% Similarity=0.063 Sum_probs=100.3
Q ss_pred CCCC-CCCCEEEEEEC-CC----eEEEEECCCC-eEEE-EEcccCCcEEEEEEcCCC-EEEEEECC-----CeEEEEeCC
Q psy7057 43 LSPG-AKVNTLLSASW-DM----TAKLWCLESQ-QCKL-TIRQHEMAVWGVIQLANG-IIVTGCAD-----KTIKLHSEE 108 (557)
Q Consensus 43 ~~~~-~~~~~l~sgs~-Dg----~i~iwd~~~~-~~~~-~l~~h~~~V~~l~~~~~~-~l~sgs~d-----g~I~vwd~~ 108 (557)
..++ |++++|+-+.. +| +|+++|+.++ +.+. .+. .....++|+|++ .|+..+.+ ..|.++++.
T Consensus 179 ~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~---~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~lg 255 (751)
T 2xe4_A 179 VKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS---GTNGEIVWGPDHTSLFYVTKDETLRENKVWRHVMG 255 (751)
T ss_dssp EEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE---EECSCCEECSSTTEEEEEEECTTCCEEEEEEEETT
T ss_pred eEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc---CceeeEEEecCCCEEEEEEECCCCCCCEEEEEECC
Confidence 4567 88988775443 33 5999999988 6221 111 112357899998 55555554 246677754
Q ss_pred Cc---EEEEEe-CCCCCEEEEEEeCCCe-EE-EEE--CCCeEEEEECCCC--eE-EEEE-eCCCCcEEEEEE-cCCEEEE
Q psy7057 109 GE---FLKTLT-GHTDCVRGLAVLNDTD-FV-SCS--NDASIRVWDSTTG--KC-VHTM-YGHPNFIYSVAA-HGDLITS 175 (557)
Q Consensus 109 ~~---~~~~l~-~h~~~V~~l~~~~~~~-lv-s~s--~Dg~I~vwd~~~~--~~-~~~~-~~h~~~V~~l~~-~~~~l~s 175 (557)
+. ....+. ........+.|+|+++ |+ +.. ....|.++|+.++ +. +..+ .......+++.+ .++.|+.
T Consensus 256 t~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~g~~l~~ 335 (751)
T 2xe4_A 256 KLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHGTSHLVI 335 (751)
T ss_dssp SCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEETTTEEEE
T ss_pred CCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeeeCCEEEE
Confidence 32 122222 2334567889999987 44 332 2345888898765 23 1333 334556677774 5665554
Q ss_pred EeC-C----CeEEEEECCC--C-ce-EeeCCc--cEEEEEEcCCCc-EEEEEcCCcEEEEe
Q psy7057 176 GGE-D----QCVCVYQNKA--Q-NS-FMIPAM--SVWAVAILPNSD-IVTGSSDGIVRVFS 224 (557)
Q Consensus 176 ~s~-D----g~I~iwd~~~--~-~~-~~~~~~--~v~~v~~~p~g~-l~sg~~Dg~I~iwd 224 (557)
.+. + ..|..+++.. . +. +..+.. .+..+.+.. +. +++...++..+||-
T Consensus 336 ~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~~-~~lv~~~~~~g~~~l~~ 395 (751)
T 2xe4_A 336 LTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVRS-NYLVVAGRRAGLTRIWT 395 (751)
T ss_dssp EECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEECS-SEEEEEEEETTEEEEEE
T ss_pred EeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEEC-CEEEEEEEeCCEEEEEE
Confidence 443 3 2567777653 2 44 444433 345555542 23 56777788755554
No 297
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=96.19 E-value=0.93 Score=45.14 Aligned_cols=176 Identities=11% Similarity=0.155 Sum_probs=112.9
Q ss_pred CCCCEEEEEECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCC----C----EEEEEEC---CCeEEEEeC--CCcEEE
Q psy7057 47 AKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLAN----G----IIVTGCA---DKTIKLHSE--EGEFLK 113 (557)
Q Consensus 47 ~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~----~----~l~sgs~---dg~I~vwd~--~~~~~~ 113 (557)
+...+++.....+-+.+||+ +|+.+..+.. ..+..+..-|+ + ++++... +++|++|++ ....+.
T Consensus 38 p~~s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~ 114 (355)
T 3amr_A 38 PQNSKLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQ 114 (355)
T ss_dssp GGGCEEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEE
T ss_pred CCccEEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCcee
Confidence 34566777788889999999 7888888864 45666665552 2 2233333 578999963 333455
Q ss_pred EEeC------CC-CCEEEEEE--eCC-Ce--EEEEECCCeEEEEECC-------CCeEEEEEeCCCCcEEEEEEc--CCE
Q psy7057 114 TLTG------HT-DCVRGLAV--LND-TD--FVSCSNDASIRVWDST-------TGKCVHTMYGHPNFIYSVAAH--GDL 172 (557)
Q Consensus 114 ~l~~------h~-~~V~~l~~--~~~-~~--lvs~s~Dg~I~vwd~~-------~~~~~~~~~~h~~~V~~l~~~--~~~ 172 (557)
.+.. .. ..+..+|+ ++. +. ++....+|.+..|++. +.+.+++|.. .+.+..+..+ ...
T Consensus 115 ~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l-gsq~EgcvvDd~~g~ 193 (355)
T 3amr_A 115 SMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKM-NSQTEGMAADDEYGR 193 (355)
T ss_dssp ECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEEC-SSCEEEEEEETTTTE
T ss_pred eccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecC-CCCcceEEEcCCCCe
Confidence 4421 11 55677787 664 43 4577888999999882 3466777764 4567777774 458
Q ss_pred EEEEeCCCeEEEEECC-----CCceEee-----CCccEEEEEEc--CCCc--EEEEE-cCCcEEEEecC
Q psy7057 173 ITSGGEDQCVCVYQNK-----AQNSFMI-----PAMSVWAVAIL--PNSD--IVTGS-SDGIVRVFSAN 226 (557)
Q Consensus 173 l~s~s~Dg~I~iwd~~-----~~~~~~~-----~~~~v~~v~~~--p~g~--l~sg~-~Dg~I~iwd~~ 226 (557)
|+.+-++.-|..++.+ +...+.. ....+-.|++- ++++ +++++ .+++..+|+..
T Consensus 194 Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 194 LYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp EEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESS
T ss_pred EEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECC
Confidence 9999999777666733 1222221 12357777774 4444 55555 57799999986
No 298
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=96.19 E-value=0.7 Score=45.62 Aligned_cols=153 Identities=10% Similarity=0.140 Sum_probs=98.9
Q ss_pred EcccCCcEEEEEEcC-CCEEEEEE-CCCeEEEEeCCCc-EEEEEeCC-----C--CCEEEEEE---eCCCeEEEEEC---
Q psy7057 75 IRQHEMAVWGVIQLA-NGIIVTGC-ADKTIKLHSEEGE-FLKTLTGH-----T--DCVRGLAV---LNDTDFVSCSN--- 138 (557)
Q Consensus 75 l~~h~~~V~~l~~~~-~~~l~sgs-~dg~I~vwd~~~~-~~~~l~~h-----~--~~V~~l~~---~~~~~lvs~s~--- 138 (557)
+........+++|.+ ++.+..++ ..++|..|+..+. ........ . ..+..|.+ .|+++|+.+..
T Consensus 8 ~~~~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~ 87 (334)
T 2p9w_A 8 VKVKNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAK 87 (334)
T ss_dssp ECCTTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETT
T ss_pred ecCcccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccc
Confidence 344445556788877 45666555 7899999997643 33222222 1 13678999 57888664333
Q ss_pred -----------CCeEEEEECC---CCeEEEEEe--CC-----------CCcEEEEEE--cCCEEEEEeCC-CeEEEEECC
Q psy7057 139 -----------DASIRVWDST---TGKCVHTMY--GH-----------PNFIYSVAA--HGDLITSGGED-QCVCVYQNK 188 (557)
Q Consensus 139 -----------Dg~I~vwd~~---~~~~~~~~~--~h-----------~~~V~~l~~--~~~~l~s~s~D-g~I~iwd~~ 188 (557)
+..|..+|+. +++.+.... .. ......++. +|+..++++.. +.|...+..
T Consensus 88 af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pd 167 (334)
T 2p9w_A 88 SFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSAD 167 (334)
T ss_dssp TTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTT
T ss_pred cccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCC
Confidence 6779999998 777665543 11 124667777 67888888877 777777744
Q ss_pred CC--ceEeeC------CccEEEEEEcCCCc-EEEEEcCCcEEEEecCC
Q psy7057 189 AQ--NSFMIP------AMSVWAVAILPNSD-IVTGSSDGIVRVFSANP 227 (557)
Q Consensus 189 ~~--~~~~~~------~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~ 227 (557)
.. ..+... ....+.++++|++. |++....|.|..+|+..
T Consensus 168 G~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~ 215 (334)
T 2p9w_A 168 GKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSK 215 (334)
T ss_dssp SCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSS
T ss_pred CCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCC
Confidence 32 211111 12356899999998 66665699999999874
No 299
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=96.14 E-value=0.78 Score=45.83 Aligned_cols=211 Identities=12% Similarity=0.099 Sum_probs=111.8
Q ss_pred ccEEEEEEcCCCc-EEEEECCCcEEEEcCCC----------------------CCCCCC---CCEEEEE-EC-------C
Q psy7057 13 MDVRSLSVTPDGC-ILSASRDKSAKLWKPND----------------------LSPGAK---VNTLLSA-SW-------D 58 (557)
Q Consensus 13 ~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~----------------------~~~~~~---~~~l~sg-s~-------D 58 (557)
..-+.|+|.|+|+ |+.+...|.|++++... ++++|+ ...|..+ +. .
T Consensus 18 ~~P~~i~~~pdG~~l~V~e~~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~ 97 (353)
T 2g8s_A 18 DHPWALAFLPDNHGMLITLRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAG 97 (353)
T ss_dssp SSEEEEEECSTTCCEEEEETTTEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEE
T ss_pred CCcEEEEEcCCCCEEEEEeCCceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCce
Confidence 4568999999999 99999999999987432 233332 2333332 22 1
Q ss_pred CeEEEEECCCC--e--EEEE-Ecc------cCCcEEEEEEcCCCEEEEEECC--------------CeEEEEeCCCc---
Q psy7057 59 MTAKLWCLESQ--Q--CKLT-IRQ------HEMAVWGVIQLANGIIVTGCAD--------------KTIKLHSEEGE--- 110 (557)
Q Consensus 59 g~i~iwd~~~~--~--~~~~-l~~------h~~~V~~l~~~~~~~l~sgs~d--------------g~I~vwd~~~~--- 110 (557)
..|..|++... . .... +.. .......|+|.|+|.|..+..| +.|.-++.++.
T Consensus 98 ~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p~ 177 (353)
T 2g8s_A 98 TAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIPD 177 (353)
T ss_dssp EEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCCT
T ss_pred eEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCCC
Confidence 24555555432 1 1111 111 1122357999999944444332 45666665543
Q ss_pred ----------EEEE-EeCCCCCEEEEEEeC-CCeEEEEECCC--eEEEEECCCC--------------------------
Q psy7057 111 ----------FLKT-LTGHTDCVRGLAVLN-DTDFVSCSNDA--SIRVWDSTTG-------------------------- 150 (557)
Q Consensus 111 ----------~~~~-l~~h~~~V~~l~~~~-~~~lvs~s~Dg--~I~vwd~~~~-------------------------- 150 (557)
.... -.+| .....++|.| .+.|.++.... .=.|.-+..+
T Consensus 178 ~npf~~~~~~~~~i~a~G~-rnp~gl~~d~~~g~l~~~d~g~~~~dei~~i~~G~nyGwp~~~~~~~~~~~~~~~~~~~~ 256 (353)
T 2g8s_A 178 DNPFIKESGVRAEIWSYGI-RNPQGMAMNPWSNALWLNEHGPRGGDEINIPQKGKNYGWPLATWGINYSGFKIPEAKGEI 256 (353)
T ss_dssp TCTTTTSTTSCTTEEEECC-SEEEEEEEETTTTEEEEEEECSBSCEEEECCCTTCBCCTTTBCSSBCTTSSCCTTCCBSS
T ss_pred CCCCcCCCCCCccEEEEcC-cCccceEEECCCCCEEEEecCCCCCcEEeEeccCCcCCCCCccCCCCCCCCccCcccCCC
Confidence 1111 1234 3478899999 67766544321 1122111111
Q ss_pred -----eEEEEEeCCCCcEEEEEE---------cCCEEEEEeCCCeEEEEECCCCc-----eEe-eCCccEEEEEEcCCCc
Q psy7057 151 -----KCVHTMYGHPNFIYSVAA---------HGDLITSGGEDQCVCVYQNKAQN-----SFM-IPAMSVWAVAILPNSD 210 (557)
Q Consensus 151 -----~~~~~~~~h~~~V~~l~~---------~~~~l~s~s~Dg~I~iwd~~~~~-----~~~-~~~~~v~~v~~~p~g~ 210 (557)
.++..+. +......+.+ .+.++++.-..+.|...++.... .+. .....+..+++.|+|.
T Consensus 257 ~~~~~~P~~~~~-~~~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~ 335 (353)
T 2g8s_A 257 VAGTEQPVFYWK-DSPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPDGY 335 (353)
T ss_dssp CTTSCCCSEEES-SCCCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECTTSC
T ss_pred CCCccCCeEEeC-CCcCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECCCCc
Confidence 1122232 2335566776 25566666677777777754331 111 1224688999999999
Q ss_pred EEEEEcCCcEEEEec
Q psy7057 211 IVTGSSDGIVRVFSA 225 (557)
Q Consensus 211 l~sg~~Dg~I~iwd~ 225 (557)
|..++.+..=+||.+
T Consensus 336 lyv~td~~~g~I~ri 350 (353)
T 2g8s_A 336 LYVLTDESSGELLKV 350 (353)
T ss_dssp EEEEECSTTEEEEEE
T ss_pred EEEEEeCCCCEEEEE
Confidence 666544333345544
No 300
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=96.13 E-value=0.97 Score=42.96 Aligned_cols=155 Identities=12% Similarity=0.053 Sum_probs=100.6
Q ss_pred EEcccCCcEEEEEEcCCC--EEEEEECCCeEEEEeCCCcEEEEEeC-CCCCEEEEEEeCCCeEEEEE-CCCeEEEEECCC
Q psy7057 74 TIRQHEMAVWGVIQLANG--IIVTGCADKTIKLHSEEGEFLKTLTG-HTDCVRGLAVLNDTDFVSCS-NDASIRVWDSTT 149 (557)
Q Consensus 74 ~l~~h~~~V~~l~~~~~~--~l~sgs~dg~I~vwd~~~~~~~~l~~-h~~~V~~l~~~~~~~lvs~s-~Dg~I~vwd~~~ 149 (557)
.+.+-...+..+++.|++ ++++...++.|...|.+++.++.+.- -....-.|++.+++.++.++ .++.+.++++..
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~ 100 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTNGDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTP 100 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETTCCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEECT
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCCCCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcCC
Confidence 455666789999999865 56667788889999988888887742 22457888888888876444 567888888754
Q ss_pred Ce---EEEEEe------CCCCcEEEEEEc--CCEEEEEeCCCe--EEEEEC--CCC-ceEee--------CCccEEEEEE
Q psy7057 150 GK---CVHTMY------GHPNFIYSVAAH--GDLITSGGEDQC--VCVYQN--KAQ-NSFMI--------PAMSVWAVAI 205 (557)
Q Consensus 150 ~~---~~~~~~------~h~~~V~~l~~~--~~~l~s~s~Dg~--I~iwd~--~~~-~~~~~--------~~~~v~~v~~ 205 (557)
.. .+.... ........|+++ ++.|+++.+... |+.|+. ... ..+.. +...+.++++
T Consensus 101 ~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~ 180 (255)
T 3qqz_A 101 NSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEF 180 (255)
T ss_dssp TCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEE
T ss_pred CCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEE
Confidence 33 223332 123345788984 446666665544 455551 111 11111 1224688999
Q ss_pred cCCCc--EEEEEcCCcEEEEecCCC
Q psy7057 206 LPNSD--IVTGSSDGIVRVFSANPD 228 (557)
Q Consensus 206 ~p~g~--l~sg~~Dg~I~iwd~~~~ 228 (557)
.|... ++.+...+.|.++|....
T Consensus 181 dp~tg~lliLS~~s~~L~~~d~~g~ 205 (255)
T 3qqz_A 181 NQQKNTLLVLSHESRALQEVTLVGE 205 (255)
T ss_dssp ETTTTEEEEEETTTTEEEEECTTCC
T ss_pred cCCCCeEEEEECCCCeEEEEcCCCC
Confidence 99765 566677888888987754
No 301
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=96.04 E-value=1.3 Score=43.57 Aligned_cols=211 Identities=8% Similarity=-0.067 Sum_probs=118.5
Q ss_pred CCeEEEEECCCCe--EEEEEcccCCcEEEEEEcCC-C-EEEEEECCCeEEEEeCCCcE--EEEEeCCCCCEEEEEEeC-C
Q psy7057 58 DMTAKLWCLESQQ--CKLTIRQHEMAVWGVIQLAN-G-IIVTGCADKTIKLHSEEGEF--LKTLTGHTDCVRGLAVLN-D 130 (557)
Q Consensus 58 Dg~i~iwd~~~~~--~~~~l~~h~~~V~~l~~~~~-~-~l~sgs~dg~I~vwd~~~~~--~~~l~~h~~~V~~l~~~~-~ 130 (557)
...|+..++.... ....+. ....+.+++|.+. + ++++-...+.|..++..+.. ...+...-.....+++.+ .
T Consensus 12 ~~~I~~i~l~~~~~~~~~~~~-~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~ 90 (318)
T 3sov_A 12 RRDLRLVDATNGKENATIVVG-GLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLG 90 (318)
T ss_dssp EEEEEEEETTCTTSCCEEEEE-EEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTT
T ss_pred cCeEEEEECCCCceEEEEEec-CCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCC
Confidence 5678888887653 222222 2235668899874 4 55665667889888865542 122222234567788886 4
Q ss_pred CeEE-EEECCCeEEEEECCCCeEEEEEeCCCCcEEEEEEc--CCEEEEEe--CCCeEEEEECCCC--ceEe-eCCccEEE
Q psy7057 131 TDFV-SCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAAH--GDLITSGG--EDQCVCVYQNKAQ--NSFM-IPAMSVWA 202 (557)
Q Consensus 131 ~~lv-s~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~~--~~~l~s~s--~Dg~I~iwd~~~~--~~~~-~~~~~v~~ 202 (557)
+.|+ +-...+.|.++++........+...-.....++++ +..|+.+. ..+.|...++... ..+. ..-.....
T Consensus 91 g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~Png 170 (318)
T 3sov_A 91 EKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNG 170 (318)
T ss_dssp TEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEE
T ss_pred CeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCCCccE
Confidence 5544 65667889999976433322233344566788884 34454444 3578888886533 2222 22235689
Q ss_pred EEEcCCCc-EE-EEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecCCC
Q psy7057 203 VAILPNSD-IV-TGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPD 273 (557)
Q Consensus 203 v~~~p~g~-l~-sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~~ 273 (557)
++++|++. |. +=+..+.|..++++........ .........+... .....++-...+.|..++...+
T Consensus 171 lavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~--~~~~~~P~glav~--~~~lywtd~~~~~V~~~~~~~G 239 (318)
T 3sov_A 171 LTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVV--KGSLPHPFALTLF--EDILYWTDWSTHSILACNKYTG 239 (318)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE--CSCCSCEEEEEEE--TTEEEEEETTTTEEEEEETTTC
T ss_pred EEEeccCCEEEEEECCCCEEEEEcCCCCceEEEe--cCCCCCceEEEEe--CCEEEEEecCCCeEEEEECCCC
Confidence 99998655 44 4455788999998753322111 1111222233322 2233345455667777766433
No 302
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=95.88 E-value=2.1 Score=46.47 Aligned_cols=174 Identities=10% Similarity=0.001 Sum_probs=110.2
Q ss_pred ccEEEEEEcCCC-cEE-EEECCCcEEEEcCCC----------------CCCCCCCCEEE-EEECCCeEEEEECCCCeEEE
Q psy7057 13 MDVRSLSVTPDG-CIL-SASRDKSAKLWKPND----------------LSPGAKVNTLL-SASWDMTAKLWCLESQQCKL 73 (557)
Q Consensus 13 ~~V~~l~~spdg-~l~-sgs~Dg~V~iWd~~~----------------~~~~~~~~~l~-sgs~Dg~i~iwd~~~~~~~~ 73 (557)
.....|+|.+.+ +|+ +-..++.|..+++.. ++.+..+..|+ +-...+.|.+.++.......
T Consensus 37 ~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~ 116 (628)
T 4a0p_A 37 KEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQV 116 (628)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEE
T ss_pred CceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEE
Confidence 356789999854 444 555678888887654 33333334443 33445778888876543322
Q ss_pred EEcccCCcEEEEEEcC-CCEEEEEEC--CCeEEEEeCCCcEEEEEeCCCCCEEEEEEeCC-CeEE-EEECCCeEEEEECC
Q psy7057 74 TIRQHEMAVWGVIQLA-NGIIVTGCA--DKTIKLHSEEGEFLKTLTGHTDCVRGLAVLND-TDFV-SCSNDASIRVWDST 148 (557)
Q Consensus 74 ~l~~h~~~V~~l~~~~-~~~l~sgs~--dg~I~vwd~~~~~~~~l~~h~~~V~~l~~~~~-~~lv-s~s~Dg~I~vwd~~ 148 (557)
.+...-.....|++.| .|.|....+ .+.|...+.+|.....+...-.....|++.++ ++|. +-...+.|...|+.
T Consensus 117 l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~d 196 (628)
T 4a0p_A 117 LVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNML 196 (628)
T ss_dssp EECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred EEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEECCCCCcceEEEccccCEEEEEECCCCEEEEEcCC
Confidence 2333445678999998 555555553 46777777777765555545567899999986 5544 55667889999986
Q ss_pred CCeEEEEEeCCCCcEEEEEEcCCEEE-EEeCCCeEEEEEC
Q psy7057 149 TGKCVHTMYGHPNFIYSVAAHGDLIT-SGGEDQCVCVYQN 187 (557)
Q Consensus 149 ~~~~~~~~~~h~~~V~~l~~~~~~l~-s~s~Dg~I~iwd~ 187 (557)
.... ..+.........|++++..|+ +-...+.|...|.
T Consensus 197 G~~~-~v~~~~l~~P~glav~~~~ly~tD~~~~~I~~~dk 235 (628)
T 4a0p_A 197 GLNR-EVIADDLPHPFGLTQYQDYIYWTDWSRRSIERANK 235 (628)
T ss_dssp SCSC-EEEEECCSCEEEEEEETTEEEEEETTTTEEEEEET
T ss_pred CCce-EEeeccCCCceEEEEECCEEEEecCCCCEEEEEEC
Confidence 5433 334334445568887555544 4445788888884
No 303
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=95.69 E-value=1.8 Score=42.64 Aligned_cols=141 Identities=11% Similarity=0.056 Sum_probs=87.1
Q ss_pred CCEEEEEE-CCCeEEEEECCCCeEEEE-Ecc----c--CCcEEEEEE---cCCC-EEEEEE-------------CCCeEE
Q psy7057 49 VNTLLSAS-WDMTAKLWCLESQQCKLT-IRQ----H--EMAVWGVIQ---LANG-IIVTGC-------------ADKTIK 103 (557)
Q Consensus 49 ~~~l~sgs-~Dg~i~iwd~~~~~~~~~-l~~----h--~~~V~~l~~---~~~~-~l~sgs-------------~dg~I~ 103 (557)
...+..++ ..++|..|+...+..... +.+ . ...+..|.+ .|++ ++++.. .+..+.
T Consensus 24 ~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v~ 103 (334)
T 2p9w_A 24 RQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHGASSFH 103 (334)
T ss_dssp TTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCCSSSCCEEE
T ss_pred CCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccccccCCCCEEE
Confidence 44455554 677888887765433222 221 1 124578999 4777 444333 257788
Q ss_pred EEeCC----CcEEEEEe--CC-----------CCCEEEEEEeCCCe-EEEEECC-CeEEEEECCCCeEEEEEeCC-----
Q psy7057 104 LHSEE----GEFLKTLT--GH-----------TDCVRGLAVLNDTD-FVSCSND-ASIRVWDSTTGKCVHTMYGH----- 159 (557)
Q Consensus 104 vwd~~----~~~~~~l~--~h-----------~~~V~~l~~~~~~~-lvs~s~D-g~I~vwd~~~~~~~~~~~~h----- 159 (557)
.+|+. ++.+.... .. ......+++.++|. +++++.. +.|...+.. ++.+..+...
T Consensus 104 ~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pd-G~~~~~~~~~~~~~~ 182 (334)
T 2p9w_A 104 SFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSAD-GKTVSTFAWESGNGG 182 (334)
T ss_dssp EEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTT-SCCEEEEEECCCCSS
T ss_pred EEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCC-CCEEeeeeecCCCcc
Confidence 89965 66654433 11 12478899999977 7778888 888888754 4433333211
Q ss_pred -CCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC
Q psy7057 160 -PNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ 190 (557)
Q Consensus 160 -~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~ 190 (557)
......|++ ++..|++....+.|..+|+...
T Consensus 183 ~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~p 216 (334)
T 2p9w_A 183 QRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKP 216 (334)
T ss_dssp SCCSCSEEEEETTTTEEEEESSSSSEEEEECSSS
T ss_pred cccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCC
Confidence 112457777 5778887767999999997755
No 304
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=95.51 E-value=3.5 Score=48.07 Aligned_cols=212 Identities=12% Similarity=0.109 Sum_probs=125.1
Q ss_pred CeEEEEECCCCeEEEEEccc-CCcEEEEEEc---CC--CEEEEEE----------CCCeEEEEeCCCcEEEEE--eCCCC
Q psy7057 59 MTAKLWCLESQQCKLTIRQH-EMAVWGVIQL---AN--GIIVTGC----------ADKTIKLHSEEGEFLKTL--TGHTD 120 (557)
Q Consensus 59 g~i~iwd~~~~~~~~~l~~h-~~~V~~l~~~---~~--~~l~sgs----------~dg~I~vwd~~~~~~~~l--~~h~~ 120 (557)
+.|++.|..+++.+..+.-. ...+.|++.. .+ .+++.|+ ..|.|.+++.....+..+ ....+
T Consensus 807 s~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~~~~v~g 886 (1158)
T 3ei3_A 807 HNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKG 886 (1158)
T ss_dssp EEEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEEEEEEESS
T ss_pred EEEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEEEEEEcCC
Confidence 35788888888776655422 3445555432 22 3777776 357799988433333222 23467
Q ss_pred CEEEEEEeCCCeEEEEECCCeEEEEECCCCeEEE-EEeCCCC-cEEEEEEcCCEEEEEeCCCeEEEEE--CCCC--ceEe
Q psy7057 121 CVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVH-TMYGHPN-FIYSVAAHGDLITSGGEDQCVCVYQ--NKAQ--NSFM 194 (557)
Q Consensus 121 ~V~~l~~~~~~~lvs~s~Dg~I~vwd~~~~~~~~-~~~~h~~-~V~~l~~~~~~l~s~s~Dg~I~iwd--~~~~--~~~~ 194 (557)
+|++++-.. |+|++|- ..+|++|++...+.++ ....+.. .+..+...+++++.|..-..|.++. .... ..+.
T Consensus 887 ~v~al~~~~-g~Lla~i-g~~l~vy~l~~~~~L~~~~~~~~~i~~~~l~~~~~~I~vgD~~~Sv~~~~y~~~~~~L~~~a 964 (1158)
T 3ei3_A 887 AVYSMVEFN-GKLLASI-NSTVRLYEWTTEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIA 964 (1158)
T ss_dssp CEEEEEEET-TEEEEEE-TTEEEEEEECTTSCEEEEEEECCCSCEEEEEEETTEEEEEESSBCEEEEEEETTTTEEEEEE
T ss_pred cCEEEeeeC-CEEEEEc-CCEEEEEECCCCceEEEEeeccccEEEEEEeccCCEEEEEEhhheEEEEEEEcCCCeEEEEE
Confidence 899998664 5666554 4789999987655333 1111222 1345656788999998877777654 3322 2222
Q ss_pred --eCCccEEEEEEcCCCcEEEEEcCCcEEEEecCCCCcchhHHH------hcc-cceeEEEec---cCCC--------ce
Q psy7057 195 --IPAMSVWAVAILPNSDIVTGSSDGIVRVFSANPDRQAEDAVQ------AQY-AEEVKKLKS---ANEQ--------EI 254 (557)
Q Consensus 195 --~~~~~v~~v~~~p~g~l~sg~~Dg~I~iwd~~~~~~~~~~~~------~~~-~~~v~~l~~---~~~~--------~~ 254 (557)
.....++++.+..+..++.+..+|.|.+.............. .-| ...++++.. .... ..
T Consensus 965 ~D~~~~~vta~~~ld~~t~l~aD~~gNl~vl~~~~~~~~~~~~~~L~~~~~fhlG~~vt~~~~~sl~~~~~~~~~~~~~~ 1044 (1158)
T 3ei3_A 965 RDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPTQG 1044 (1158)
T ss_dssp ECCSCBCEEEEEEEETTEEEEEETTSEEEEEEECTTCCSTTGGGBEEEEEEEECSSCEEEEEECCSCCC-------CEEE
T ss_pred eecccccEEEEEEEccCcEEEEcCCCcEEEEecCCCCCCccccceeeeEEEEeCCCcEeeEEeeeeecCCCccccccccc
Confidence 234468888888777788899999999998876422111000 001 123333321 1111 23
Q ss_pred eEEEEeCCCcEEEEecCC
Q psy7057 255 GGVKVSDDGIVRVFSANP 272 (557)
Q Consensus 255 ~~vs~s~DG~IrvW~~~~ 272 (557)
.++-++.+|.|-+.-.-+
T Consensus 1045 ~il~~T~~GsIg~l~pl~ 1062 (1158)
T 3ei3_A 1045 SVLFGTVNGMIGLVTSLS 1062 (1158)
T ss_dssp EEEEEETTSCEEEEEEEC
T ss_pred eEEEEecCCEEEEEEEcC
Confidence 467889999998876544
No 305
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=95.26 E-value=2.8 Score=43.86 Aligned_cols=214 Identities=11% Similarity=0.036 Sum_probs=121.7
Q ss_pred EEEEEEcCC--CcEEEEEC-CCcEEEEcCCC-------------------CCC-------CCCCCEEEEEECCC------
Q psy7057 15 VRSLSVTPD--GCILSASR-DKSAKLWKPND-------------------LSP-------GAKVNTLLSASWDM------ 59 (557)
Q Consensus 15 V~~l~~spd--g~l~sgs~-Dg~V~iWd~~~-------------------~~~-------~~~~~~l~sgs~Dg------ 59 (557)
-..|+|+|. +.|+.+.. .+.|++.|+.. +++ +++++.|+.+...+
T Consensus 141 p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~ 220 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDES 220 (496)
T ss_dssp EEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGE
T ss_pred CCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccC
Confidence 568999984 44655544 46788887765 334 66777677666654
Q ss_pred -eEEEEECCC-CeEE-----EEEcccCCcEEEEEEcC-CC-EEEEEECCCeEEEEeCC--------CcE-----------
Q psy7057 60 -TAKLWCLES-QQCK-----LTIRQHEMAVWGVIQLA-NG-IIVTGCADKTIKLHSEE--------GEF----------- 111 (557)
Q Consensus 60 -~i~iwd~~~-~~~~-----~~l~~h~~~V~~l~~~~-~~-~l~sgs~dg~I~vwd~~--------~~~----------- 111 (557)
.|.+++... +... ..+.... ....++..| ++ ++++-..++.|..+|.. +..
T Consensus 221 ~~V~~i~r~~~G~~~~~~~~~~v~~~~-~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~ 299 (496)
T 3kya_A 221 PSVYIIKRNADGTFDDRSDIQLIAAYK-QCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNT 299 (496)
T ss_dssp EEEEEEECCTTSCCSTTSCEEEEEEES-CCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTT
T ss_pred ceEEEEecCCCCceeecccceeeccCC-CceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccc
Confidence 255554333 1111 1121111 234667788 44 56666678889999853 332
Q ss_pred EEE-Ee-CCCCCEEEEEEeCCCe--EEEEECCCeEEEEEC--CCCeE--EEEEeCC---C------------CcEE-EEE
Q psy7057 112 LKT-LT-GHTDCVRGLAVLNDTD--FVSCSNDASIRVWDS--TTGKC--VHTMYGH---P------------NFIY-SVA 167 (557)
Q Consensus 112 ~~~-l~-~h~~~V~~l~~~~~~~--lvs~s~Dg~I~vwd~--~~~~~--~~~~~~h---~------------~~V~-~l~ 167 (557)
... +. +.....+.|+++|++. +++-+....|+.++. .++.. ..++.+. . .... .++
T Consensus 300 ~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~ 379 (496)
T 3kya_A 300 FKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVF 379 (496)
T ss_dssp EEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEE
T ss_pred cceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEEE
Confidence 112 21 2234568999999987 345566788988654 33322 1233221 1 1223 333
Q ss_pred Ec---------CCEEEEEeCCCeEEEEECCCC-ceEeeC------------------------CccEEEEEEcCC-CcEE
Q psy7057 168 AH---------GDLITSGGEDQCVCVYQNKAQ-NSFMIP------------------------AMSVWAVAILPN-SDIV 212 (557)
Q Consensus 168 ~~---------~~~l~s~s~Dg~I~iwd~~~~-~~~~~~------------------------~~~v~~v~~~p~-g~l~ 212 (557)
.+ +.++++=....+|+.++.... .++.+. -.....|++.++ +.|+
T Consensus 380 vd~~~~~~~~~g~lyVaD~~N~rIr~i~~~G~v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~ly 459 (496)
T 3kya_A 380 VKNPDYTGEEEYDFYFVDRLNFCVRKVTPEGIVSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKEMFY 459 (496)
T ss_dssp EECTTCCSSCCEEEEEEEGGGTEEEEECTTCBEEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTEEE
T ss_pred EccccccccCCCeEEEEECCCCEEEEEeCCCCEEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCCEEE
Confidence 33 345556567788999884322 333221 023678999996 7755
Q ss_pred EEE-cCCcEEEEecCCCC
Q psy7057 213 TGS-SDGIVRVFSANPDR 229 (557)
Q Consensus 213 sg~-~Dg~I~iwd~~~~~ 229 (557)
.+. ....||.+++....
T Consensus 460 VaD~~N~rIrki~~~~~~ 477 (496)
T 3kya_A 460 VHDQVGHTIRTISMEQEE 477 (496)
T ss_dssp EEETTTTEEEEEEECCCC
T ss_pred EEeCCCCEEEEEECCCCc
Confidence 554 56789999887653
No 306
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=95.01 E-value=4.1 Score=42.59 Aligned_cols=233 Identities=9% Similarity=0.072 Sum_probs=124.6
Q ss_pred CCCCCC-CCEEEEE-ECCCeEEEEECCCCeEEEEEccc---CCcEEEEEE-------cCCC-EEEEEECCC-------eE
Q psy7057 43 LSPGAK-VNTLLSA-SWDMTAKLWCLESQQCKLTIRQH---EMAVWGVIQ-------LANG-IIVTGCADK-------TI 102 (557)
Q Consensus 43 ~~~~~~-~~~l~sg-s~Dg~i~iwd~~~~~~~~~l~~h---~~~V~~l~~-------~~~~-~l~sgs~dg-------~I 102 (557)
++++|. ...|+.+ ...+.|++.|++++.....+... ......++| .+++ .|+.+...+ .|
T Consensus 144 la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V 223 (496)
T 3kya_A 144 LAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSV 223 (496)
T ss_dssp EEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEE
T ss_pred EEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceE
Confidence 556652 3444444 44477899998887655444322 235889999 8888 466666554 25
Q ss_pred EEEeCCC--cEE-----EEEeCCCCCEEEEEEeCC-CeEE-EEECCCeEEEEECC-------CCeE-----------EEE
Q psy7057 103 KLHSEEG--EFL-----KTLTGHTDCVRGLAVLND-TDFV-SCSNDASIRVWDST-------TGKC-----------VHT 155 (557)
Q Consensus 103 ~vwd~~~--~~~-----~~l~~h~~~V~~l~~~~~-~~lv-s~s~Dg~I~vwd~~-------~~~~-----------~~~ 155 (557)
.+.+... ... ..+... .....++++|+ +.|+ +-..++.|..+|+. ++.. ...
T Consensus 224 ~~i~r~~~G~~~~~~~~~~v~~~-~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~ 302 (496)
T 3kya_A 224 YIIKRNADGTFDDRSDIQLIAAY-KQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQ 302 (496)
T ss_dssp EEEECCTTSCCSTTSCEEEEEEE-SCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEE
T ss_pred EEEecCCCCceeecccceeeccC-CCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccce
Confidence 5665222 221 122211 23456788884 5544 66677889999987 4543 122
Q ss_pred -Ee-CCCCcEEEEEE--cCCE-EEEEeCCCeEEEEEC--CCC-----ceEeeC---C------------ccEE-EEEEc-
Q psy7057 156 -MY-GHPNFIYSVAA--HGDL-ITSGGEDQCVCVYQN--KAQ-----NSFMIP---A------------MSVW-AVAIL- 206 (557)
Q Consensus 156 -~~-~h~~~V~~l~~--~~~~-l~s~s~Dg~I~iwd~--~~~-----~~~~~~---~------------~~v~-~v~~~- 206 (557)
+. +.....+.|++ +++. +++-+....|+.++. ... ..+.+. . .... .++..
T Consensus 303 l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd~ 382 (496)
T 3kya_A 303 LFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVFVKN 382 (496)
T ss_dssp EEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEEEC
T ss_pred eEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEEEEcc
Confidence 21 22344578888 6674 555567788988663 221 122221 0 1234 45554
Q ss_pred ------CCCcEE-EEEcCCcEEEEecCCCCcchhHHH---------------------hcccceeEEEeccCCCceeEEE
Q psy7057 207 ------PNSDIV-TGSSDGIVRVFSANPDRQAEDAVQ---------------------AQYAEEVKKLKSANEQEIGGVK 258 (557)
Q Consensus 207 ------p~g~l~-sg~~Dg~I~iwd~~~~~~~~~~~~---------------------~~~~~~v~~l~~~~~~~~~~vs 258 (557)
+++.|+ +=....+||.++.. +........ .........++..+......|+
T Consensus 383 ~~~~~~~~g~lyVaD~~N~rIr~i~~~-G~v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~lyVa 461 (496)
T 3kya_A 383 PDYTGEEEYDFYFVDRLNFCVRKVTPE-GIVSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKEMFYVH 461 (496)
T ss_dssp TTCCSSCCEEEEEEEGGGTEEEEECTT-CBEEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTEEEEE
T ss_pred ccccccCCCeEEEEECCCCEEEEEeCC-CCEEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCCEEEEE
Confidence 456654 44457889999843 322111000 0011123344444433444566
Q ss_pred EeCCCcEEEEecCCChhhH
Q psy7057 259 VSDDGIVRVFSANPDRQAE 277 (557)
Q Consensus 259 ~s~DG~IrvW~~~~~~~~~ 277 (557)
=+....||.++++.+....
T Consensus 462 D~~N~rIrki~~~~~~~~~ 480 (496)
T 3kya_A 462 DQVGHTIRTISMEQEENVA 480 (496)
T ss_dssp ETTTTEEEEEEECCCC---
T ss_pred eCCCCEEEEEECCCCcccc
Confidence 6667788888887765543
No 307
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=94.85 E-value=5.4 Score=43.15 Aligned_cols=182 Identities=8% Similarity=-0.089 Sum_probs=109.6
Q ss_pred CCCCCCEEEEE-ECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCC-C-EEEEEECCCeEEEEeCCCcEEEEEe-CCCC
Q psy7057 45 PGAKVNTLLSA-SWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLAN-G-IIVTGCADKTIKLHSEEGEFLKTLT-GHTD 120 (557)
Q Consensus 45 ~~~~~~~l~sg-s~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~-~-~l~sgs~dg~I~vwd~~~~~~~~l~-~h~~ 120 (557)
+++..+.|+.+ ..++.|..+++........+.........+++.+. + ++++-...+.|.+.+.+|.....+. ..-.
T Consensus 44 ~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~ 123 (628)
T 4a0p_A 44 FDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLD 123 (628)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCC
T ss_pred EECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCC
Confidence 34444444444 44677888887654433333333345667888754 3 5566666788999998776554443 3445
Q ss_pred CEEEEEEeCC-CeEEEEEC--CCeEEEEECCCCeEEEEEeCCCCcEEEEEEc--CCEE-EEEeCCCeEEEEECCCC--ce
Q psy7057 121 CVRGLAVLND-TDFVSCSN--DASIRVWDSTTGKCVHTMYGHPNFIYSVAAH--GDLI-TSGGEDQCVCVYQNKAQ--NS 192 (557)
Q Consensus 121 ~V~~l~~~~~-~~lvs~s~--Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~~--~~~l-~s~s~Dg~I~iwd~~~~--~~ 192 (557)
..+.|++.|. +.|..+.+ .+.|...++.... ...+...-.....|+++ +..| ++-...+.|..+++... +.
T Consensus 124 ~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~-~~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~~v 202 (628)
T 4a0p_A 124 SPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSE-RTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNREV 202 (628)
T ss_dssp CEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS-CEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred CcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCc-eEEEECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCceEE
Confidence 6899999985 66654443 4678888875433 23333344566788884 4444 45556778999986543 33
Q ss_pred EeeCCccEEEEEEcCCCc-EEEEEcCCcEEEEecCCC
Q psy7057 193 FMIPAMSVWAVAILPNSD-IVTGSSDGIVRVFSANPD 228 (557)
Q Consensus 193 ~~~~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~ 228 (557)
+.........+++.. +. +++-...+.|...+..++
T Consensus 203 ~~~~l~~P~glav~~-~~ly~tD~~~~~I~~~dk~tg 238 (628)
T 4a0p_A 203 IADDLPHPFGLTQYQ-DYIYWTDWSRRSIERANKTSG 238 (628)
T ss_dssp EEECCSCEEEEEEET-TEEEEEETTTTEEEEEETTTC
T ss_pred eeccCCCceEEEEEC-CEEEEecCCCCEEEEEECCCC
Confidence 333334556778765 44 445445778888876544
No 308
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=94.22 E-value=4.1 Score=40.46 Aligned_cols=176 Identities=15% Similarity=0.218 Sum_probs=106.0
Q ss_pred EEEEEECCCeEEEEeCCCcEEEEEeCCCCCEEEEEEeCC----Ce---EE--EEEC--CCeEEEEEC--CCCeEEEEEeC
Q psy7057 92 IIVTGCADKTIKLHSEEGEFLKTLTGHTDCVRGLAVLND----TD---FV--SCSN--DASIRVWDS--TTGKCVHTMYG 158 (557)
Q Consensus 92 ~l~sgs~dg~I~vwd~~~~~~~~l~~h~~~V~~l~~~~~----~~---lv--s~s~--Dg~I~vwd~--~~~~~~~~~~~ 158 (557)
+++.....+-+.++|++|+.+..+.. +.+..+.+-|+ ++ ++ +.-. +.+|++|++ .+++ +..+..
T Consensus 42 ~ii~t~k~~gL~Vydl~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~-l~~i~~ 118 (355)
T 3amr_A 42 KLITTNKKSGLVVYSLDGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT-LQSMTD 118 (355)
T ss_dssp EEEEEETTTEEEEEETTSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-EEECSC
T ss_pred EEEEEcCCCCEEEEcCCCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-eeeccc
Confidence 67777788899999999999998864 55777776653 22 33 3334 578999976 3333 444421
Q ss_pred ------CC-CcEEEEEE--c---CC-EEEEEeCCCeEEEEECC---CC-------ceEeeCCccEEEEEEcCCCc-EEEE
Q psy7057 159 ------HP-NFIYSVAA--H---GD-LITSGGEDQCVCVYQNK---AQ-------NSFMIPAMSVWAVAILPNSD-IVTG 214 (557)
Q Consensus 159 ------h~-~~V~~l~~--~---~~-~l~s~s~Dg~I~iwd~~---~~-------~~~~~~~~~v~~v~~~p~g~-l~sg 214 (557)
.. ..++.+|+ + +. ++++...+|.+..|++. .. +++.. ...+-.+.+.+... |+.+
T Consensus 119 ~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l-gsq~EgcvvDd~~g~Lyv~ 197 (355)
T 3amr_A 119 PDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKM-NSQTEGMAADDEYGRLYIA 197 (355)
T ss_dssp TTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEEC-SSCEEEEEEETTTTEEEEE
T ss_pred cccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecC-CCCcceEEEcCCCCeEEEe
Confidence 11 44555665 3 33 68888889999999852 21 33333 34677777877654 8888
Q ss_pred EcCCcEEEEecCCCC-----cchhHHHhcccceeEEEecc--CCCceeEEEEe-CCCcEEEEecC
Q psy7057 215 SSDGIVRVFSANPDR-----QAEDAVQAQYAEEVKKLKSA--NEQEIGGVKVS-DDGIVRVFSAN 271 (557)
Q Consensus 215 ~~Dg~I~iwd~~~~~-----~~~~~~~~~~~~~v~~l~~~--~~~~~~~vs~s-~DG~IrvW~~~ 271 (557)
-++.-|..++.+... .............+..+... +...-++++.| .+.++.||+..
T Consensus 198 eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 198 EEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp ETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESS
T ss_pred cccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECC
Confidence 888665555544322 11111112223345555442 22332344444 78899999986
No 309
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=94.20 E-value=2.5 Score=42.21 Aligned_cols=147 Identities=11% Similarity=0.121 Sum_probs=86.8
Q ss_pred cEEEEEEcCCCEEEEEE-------------CCCeEEEEeCC---CcEE-EEEeC-----CCCCEEEEEEeC--CC--eEE
Q psy7057 81 AVWGVIQLANGIIVTGC-------------ADKTIKLHSEE---GEFL-KTLTG-----HTDCVRGLAVLN--DT--DFV 134 (557)
Q Consensus 81 ~V~~l~~~~~~~l~sgs-------------~dg~I~vwd~~---~~~~-~~l~~-----h~~~V~~l~~~~--~~--~lv 134 (557)
....+...++|++++++ .+|.|.++|.. ++.. ..+.+ ..-....|.+.+ ++ .|+
T Consensus 51 G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~ 130 (355)
T 3sre_A 51 GSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLL 130 (355)
T ss_dssp CCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEE
T ss_pred CcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEE
Confidence 34466678888766666 68999999954 2221 12222 123567777755 34 344
Q ss_pred EE-EC--CCeEEEEECCCC--e--EEEEEeCC-CCcEEEEEE--cCCEEEEEe-----------------CCCeEEEEEC
Q psy7057 135 SC-SN--DASIRVWDSTTG--K--CVHTMYGH-PNFIYSVAA--HGDLITSGG-----------------EDQCVCVYQN 187 (557)
Q Consensus 135 s~-s~--Dg~I~vwd~~~~--~--~~~~~~~h-~~~V~~l~~--~~~~l~s~s-----------------~Dg~I~iwd~ 187 (557)
.+ .. +.+|.+|++... . .+.++.+. -.....+.+ +|.++++.. ..+.|..++.
T Consensus 131 Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~ 210 (355)
T 3sre_A 131 VVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP 210 (355)
T ss_dssp EEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT
T ss_pred EEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC
Confidence 33 32 467778776542 2 23344432 235677777 555555543 1255666666
Q ss_pred CCCceEeeCCccEEEEEEcCCCc-E-EEEEcCCcEEEEecCC
Q psy7057 188 KAQNSFMIPAMSVWAVAILPNSD-I-VTGSSDGIVRVFSANP 227 (557)
Q Consensus 188 ~~~~~~~~~~~~v~~v~~~p~g~-l-~sg~~Dg~I~iwd~~~ 227 (557)
.+...+...-...+.++|+|+++ + ++-+..+.|+.|++..
T Consensus 211 ~~~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~ 252 (355)
T 3sre_A 211 NDVRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHA 252 (355)
T ss_dssp TCCEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred CeEEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECC
Confidence 54444433334678999999997 4 4555678999999874
No 310
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=94.01 E-value=7.6 Score=41.86 Aligned_cols=184 Identities=8% Similarity=-0.051 Sum_probs=102.7
Q ss_pred CCCCCCEEEEEEC-CCeEEEEECCCCeE-EEEEcccCCcEEEEEEcCC-C-EEEEEECCCeEEEEeCCCcEEEEEe-CCC
Q psy7057 45 PGAKVNTLLSASW-DMTAKLWCLESQQC-KLTIRQHEMAVWGVIQLAN-G-IIVTGCADKTIKLHSEEGEFLKTLT-GHT 119 (557)
Q Consensus 45 ~~~~~~~l~sgs~-Dg~i~iwd~~~~~~-~~~l~~h~~~V~~l~~~~~-~-~l~sgs~dg~I~vwd~~~~~~~~l~-~h~ 119 (557)
+++..+.|+.+.. .+.|..+++..... ...+...-.....+++.+. + ++++-...+.|.+.+.+|.....+. ..-
T Consensus 47 ~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l 126 (619)
T 3s94_A 47 FVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQEL 126 (619)
T ss_dssp EETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSC
T ss_pred EEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCEEEEEeCCC
Confidence 3334455554443 46777777765432 2233333357888999884 4 5556666789999998887655554 444
Q ss_pred CCEEEEEEeCC-CeEEEEEC--CCeEEEEECCCCeEEEEEeCCCCcEEEEEEc--CCEE-EEEeCCCeEEEEECCCC--c
Q psy7057 120 DCVRGLAVLND-TDFVSCSN--DASIRVWDSTTGKCVHTMYGHPNFIYSVAAH--GDLI-TSGGEDQCVCVYQNKAQ--N 191 (557)
Q Consensus 120 ~~V~~l~~~~~-~~lvs~s~--Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~~--~~~l-~s~s~Dg~I~iwd~~~~--~ 191 (557)
...+.|++.|. +.|..+.. .+.|...++............-.....|+++ +..| ++=+..+.|..+++... +
T Consensus 127 ~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~ 206 (619)
T 3s94_A 127 DQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQ 206 (619)
T ss_dssp SCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC
T ss_pred CCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccE
Confidence 56789999986 66554443 3567777765332222222234456778884 4444 45456678888886543 2
Q ss_pred eEee-CCccEEEEEEcCCCcEEEEEcCCcEEEEecCCC
Q psy7057 192 SFMI-PAMSVWAVAILPNSDIVTGSSDGIVRVFSANPD 228 (557)
Q Consensus 192 ~~~~-~~~~v~~v~~~p~g~l~sg~~Dg~I~iwd~~~~ 228 (557)
.+.. .......+++..+.-+++-...+.|...+..++
T Consensus 207 ~~~~~~~~~P~gi~~~~~~ly~td~~~~~V~~~d~~tg 244 (619)
T 3s94_A 207 AVVKGSLPHPFALTLFEDILYWTDWSTHSILACNKYTG 244 (619)
T ss_dssp ---------CCCEEESSSEEEEECTTTCSEEEEESSSC
T ss_pred EEEeCCCCCceEEEEeCCEEEEecCCCCEEEEEECCCC
Confidence 1111 111224566655522444445677888776554
No 311
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=93.98 E-value=12 Score=43.58 Aligned_cols=251 Identities=14% Similarity=0.097 Sum_probs=139.8
Q ss_pred EEEEEcCCCcEEEEECCCcEEEEcCCC-----------------------CC---C-CCCCCEEEEEEC---CCeEEEEE
Q psy7057 16 RSLSVTPDGCILSASRDKSAKLWKPND-----------------------LS---P-GAKVNTLLSASW---DMTAKLWC 65 (557)
Q Consensus 16 ~~l~~spdg~l~sgs~Dg~V~iWd~~~-----------------------~~---~-~~~~~~l~sgs~---Dg~i~iwd 65 (557)
.|+++..+|.|+.||..|.=.+|.+.. +. . ......|++++. +|++++..
T Consensus 330 ssl~~l~~g~lFvgS~~Gds~l~~~~~~~~~~~~~~~~~~~~~N~~PI~D~~v~d~~~~~~~~i~~~sG~g~~gsL~~lr 409 (1158)
T 3ei3_A 330 ECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIR 409 (1158)
T ss_dssp SEEEECSTTEEEEECSSSCEEEEEECSSCCTTSCCEEEEEEECCCCSEEEEEEECTTSSSCCEEEEEECCGGGCEEEEEE
T ss_pred cEEEEECCCEEEEEEecCCcEEEEEecCCCCccceEEeEeeecCcCCceeEEEEccCCCCCCeEEEEECcCCCCeEEEEe
Confidence 566666777788898877766665542 00 0 012235665553 57788775
Q ss_pred CCCC-eEEEEEc-ccCCcEEEEEEcC----CCEEEEEECCCeEEEEeCCCcEEEEEe--CCC---CCEEEEEEeCCCeEE
Q psy7057 66 LESQ-QCKLTIR-QHEMAVWGVIQLA----NGIIVTGCADKTIKLHSEEGEFLKTLT--GHT---DCVRGLAVLNDTDFV 134 (557)
Q Consensus 66 ~~~~-~~~~~l~-~h~~~V~~l~~~~----~~~l~sgs~dg~I~vwd~~~~~~~~l~--~h~---~~V~~l~~~~~~~lv 134 (557)
-.=+ +....+. ..-..+|.+.... +.+|+.+..+.+ +++..+++.+..+. +-. ..+.+- -.+++.++
T Consensus 410 ~Gi~~~~~~~~~l~gv~~iWtl~~~~~~~~~~yLvlS~~~~T-~Vl~i~~e~veev~~~gf~~~~~TL~~~-~l~~~~iv 487 (1158)
T 3ei3_A 410 NGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQT-RVLMLNGEEVEETELMGFVDDQQTFFCG-NVAHQQLI 487 (1158)
T ss_dssp ESBCEEEEEEECCCSCCEEEEECCCSSCSSCCEEEEEETTEE-EEEEEETTEEEEECCTTCCSSSCEEEEE-EETTTEEE
T ss_pred cCCCEEEEEeecCCCccEEEEEeecCCCCCCCEEEEECCCCe-EEEEEeCCcccccccccccCCCCcEEEE-EcCCCeEE
Confidence 3222 1222221 1235677765432 236666666666 45544444444332 111 122222 22455566
Q ss_pred EEECCCeEEEEECCCCeEEEEEeCC-CCcEEEEEEcCCEEEEEeCCCeEEEEECCCC--c--eEeeCCccEEEEEEcCCC
Q psy7057 135 SCSNDASIRVWDSTTGKCVHTMYGH-PNFIYSVAAHGDLITSGGEDQCVCVYQNKAQ--N--SFMIPAMSVWAVAILPNS 209 (557)
Q Consensus 135 s~s~Dg~I~vwd~~~~~~~~~~~~h-~~~V~~l~~~~~~l~s~s~Dg~I~iwd~~~~--~--~~~~~~~~v~~v~~~p~g 209 (557)
=... ..|++.+......+..+... ...|...+.++..++.++ .+.+.++.+... . .-......|.|+++.|..
T Consensus 488 QVt~-~~Irli~~~~~~~~~~w~~p~~~~I~~As~n~~~vvva~-g~~l~~fel~~~~L~~~~~~~l~~evscl~i~~~~ 565 (1158)
T 3ei3_A 488 QITS-ASVRLVSQEPKALVSEWKEPQAKNISVASCNSSQVVVAV-GRALYYLQIHPQELRQISHTEMEHEVACLDITPLG 565 (1158)
T ss_dssp EEES-SCEEEEESSSCCEEEEECCTTCCCCCEEEECSSEEEEEE-TTEEEEEEEETTEEEEEEEEECSSCEEEEECCCCS
T ss_pred EEec-CEEEEEECCCCeEEEEEECCCCCEEEEEEeCCCEEEEEE-CCEEEEEEeeCCceeeecccCCCCceEEEEeecCC
Confidence 4443 45888886666677777643 345777777667776665 677888765432 1 112235579999987632
Q ss_pred ------c-EEEEEc-CCcEEEEecCCCCcchhHHHhc--ccceeEEEeccCCCceeEEEEeCCCcEEEEecCC
Q psy7057 210 ------D-IVTGSS-DGIVRVFSANPDRQAEDAVQAQ--YAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANP 272 (557)
Q Consensus 210 ------~-l~sg~~-Dg~I~iwd~~~~~~~~~~~~~~--~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~ 272 (557)
+ ++.|+. |++|+|+++...+......... ...++..+.. .....+..|-.||.+..+.+++
T Consensus 566 ~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~~~p~si~l~~~--~~~~~L~igl~dG~l~~~~~d~ 636 (1158)
T 3ei3_A 566 DSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTF--ESSHYLLCALGDGALFYFGLNI 636 (1158)
T ss_dssp SSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCSSCCEEEEEEEEE--TTEEEEEEEETTSEEEEEEECT
T ss_pred CCcccccEEEEEECCCCEEEEEECCCCCeEEEEECCCCCCCcEEEEEEe--CCCcEEEEEeCCCeEEEEEEcC
Confidence 3 778886 9999999998644332111111 1122222222 2345678888999988777664
No 312
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=93.71 E-value=0.1 Score=52.01 Aligned_cols=181 Identities=9% Similarity=-0.010 Sum_probs=101.5
Q ss_pred CCEEEEEECCCeEEEEECCCCeEEEEEccc-CCcEEEEEEc---CCCEEEEE--ECCCeEEEEeC-CCcEEEEEeC----
Q psy7057 49 VNTLLSASWDMTAKLWCLESQQCKLTIRQH-EMAVWGVIQL---ANGIIVTG--CADKTIKLHSE-EGEFLKTLTG---- 117 (557)
Q Consensus 49 ~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h-~~~V~~l~~~---~~~~l~sg--s~dg~I~vwd~-~~~~~~~l~~---- 117 (557)
+..++.++.||.|.-+|..+|+...++... ..++....-. .++.++.+ +.||.+..++. +|.....+..
T Consensus 10 ~~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv 89 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLV 89 (339)
T ss_dssp EEEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHH
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccce
Confidence 457899999999999999999999998754 1222221100 13334433 58999999984 4433332221
Q ss_pred CCCCEEE---EEE------eCCCeEEEEECCCeEEEEECCCCeEEEEEeCCC--C-----cEEEEE-------EcCCEEE
Q psy7057 118 HTDCVRG---LAV------LNDTDFVSCSNDASIRVWDSTTGKCVHTMYGHP--N-----FIYSVA-------AHGDLIT 174 (557)
Q Consensus 118 h~~~V~~---l~~------~~~~~lvs~s~Dg~I~vwd~~~~~~~~~~~~h~--~-----~V~~l~-------~~~~~l~ 174 (557)
...++.. ..+ +.++.+++|+.++++...|+++|+.+.++.... . ...|.. ..+..++
T Consensus 90 ~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~v~ 169 (339)
T 2be1_A 90 STSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENMIV 169 (339)
T ss_dssp TTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------CCEEE
T ss_pred eccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCCCeEE
Confidence 2223331 001 245678899999999999999999999986321 1 011111 1234566
Q ss_pred EEeCCCeEEEEECCCCce----Ee---eCCc--cEE-EEEEcCCCcEEEEEcCCcEEEEecCCCCc
Q psy7057 175 SGGEDQCVCVYQNKAQNS----FM---IPAM--SVW-AVAILPNSDIVTGSSDGIVRVFSANPDRQ 230 (557)
Q Consensus 175 s~s~Dg~I~iwd~~~~~~----~~---~~~~--~v~-~v~~~p~g~l~sg~~Dg~I~iwd~~~~~~ 230 (557)
.+..+..+.+.+ ++.+. +. .... .+. .-..+.++.++.++.||.|..+|..++..
T Consensus 170 ig~~~y~v~~~~-~sG~~W~~~~s~~~~~~~~~~~~~~~~~s~Dg~~~~~~~dg~v~A~d~~~G~~ 234 (339)
T 2be1_A 170 IGKTIFELGIHS-YDGASYNVTYSTWQQNVLDVPLALQNTFSKDGMCIAPFRDKSLLASDLDFRIA 234 (339)
T ss_dssp EEEEEEECEECC-TTSCCCCCEEEEEECCTTTHHHHTTCSSCSSSCCEEEETTTEEEEECSTTCCE
T ss_pred EecceEEEEEEC-CCCCeEEEecccccccccccccccccccccCCcEEEECCCCEEEEEECCCCcE
Confidence 666666666655 22110 00 0000 000 00001235556688899998888876654
No 313
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=93.58 E-value=6.4 Score=39.10 Aligned_cols=206 Identities=13% Similarity=0.042 Sum_probs=106.9
Q ss_pred eccCcccEEEEEEcCCCcEEEEEC-CCcEEEEcCCC----------------------CCCCCC---CCEEEEE-E--CC
Q psy7057 8 LYGHSMDVRSLSVTPDGCILSASR-DKSAKLWKPND----------------------LSPGAK---VNTLLSA-S--WD 58 (557)
Q Consensus 8 l~gH~~~V~~l~~spdg~l~sgs~-Dg~V~iWd~~~----------------------~~~~~~---~~~l~sg-s--~D 58 (557)
+...-..-+.|+|.|||+|+.+.. .|.|++++... ++++|+ ...|... + .+
T Consensus 27 va~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~ 106 (347)
T 3das_A 27 VATGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASD 106 (347)
T ss_dssp EECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSS
T ss_pred eecCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCC
Confidence 333345678999999999777777 89999997542 333332 2233322 2 23
Q ss_pred CeEEEEECCC----------CeEEE-EEcc-cCCcEEEEEEcCCC-EEEEEE-------------CCCeEEEEeCCCcE-
Q psy7057 59 MTAKLWCLES----------QQCKL-TIRQ-HEMAVWGVIQLANG-IIVTGC-------------ADKTIKLHSEEGEF- 111 (557)
Q Consensus 59 g~i~iwd~~~----------~~~~~-~l~~-h~~~V~~l~~~~~~-~l~sgs-------------~dg~I~vwd~~~~~- 111 (557)
..|.-|.+.. .+.+. .+.. .......|+|.|+| ++++.+ ..+.|.-.+.++..
T Consensus 107 ~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip 186 (347)
T 3das_A 107 NRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPA 186 (347)
T ss_dssp EEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBC
T ss_pred CEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCcc
Confidence 4454455443 12222 2221 12234568999999 444433 13455555544431
Q ss_pred --------EEEEeCCCCCEEEEEEeCCCeEEEEEC--CC--eEEEEE--------CCCC--------eEEEEEeCCCCcE
Q psy7057 112 --------LKTLTGHTDCVRGLAVLNDTDFVSCSN--DA--SIRVWD--------STTG--------KCVHTMYGHPNFI 163 (557)
Q Consensus 112 --------~~~l~~h~~~V~~l~~~~~~~lvs~s~--Dg--~I~vwd--------~~~~--------~~~~~~~~h~~~V 163 (557)
...-.+|. ....++|+|++.|.++-. |+ .|.+.. ...+ .++..+..+....
T Consensus 187 ~~nPf~~~~i~a~G~R-Np~Gla~dp~G~L~~~d~g~~~~deln~i~~G~nyGwP~~~g~~~~~~~~~P~~~~~~~~~ap 265 (347)
T 3das_A 187 PGNPFPGSPVYSYGHR-NVQGLAWDDKQRLFASEFGQDTWDELNAIKPGDNYGWPEAEGKGGGSGFHDPVAQWSTDEASP 265 (347)
T ss_dssp TTCSSTTCCEEEBCCS-BCCEEEECTTCCEEEEECCSSSCEEEEEECTTCBCCTTTCCSSCCCTTCCCCSEEECTTTCCE
T ss_pred CCCCCCCCeEEeeCCC-CcceEEECCCCCEEEEecCCCCCceeeEEcCCCEecCCcccCCCCCccccCCcEecCCCCCCC
Confidence 11223554 356789999888765543 22 132221 0011 1233333232456
Q ss_pred EEEEE-cCCEEEEEeCCCeEEEEECCCC------ce-EeeCCccEEEEEEcCCCcEEEE
Q psy7057 164 YSVAA-HGDLITSGGEDQCVCVYQNKAQ------NS-FMIPAMSVWAVAILPNSDIVTG 214 (557)
Q Consensus 164 ~~l~~-~~~~l~s~s~Dg~I~iwd~~~~------~~-~~~~~~~v~~v~~~p~g~l~sg 214 (557)
..|++ .+..++..-..+.|....+... .. +......+..|+..|+|.|..+
T Consensus 266 ~G~~~~~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~pDG~lyv~ 324 (347)
T 3das_A 266 SGIAYAEGSVWMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAGGDKLWLV 324 (347)
T ss_dssp EEEEEETTEEEEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEEETTEEEEE
T ss_pred cceEEEcCceeeccccCCEEEEEEecCCceecceEEeecCCCCCccEEEECCCCcEEEE
Confidence 67777 5555555555556655553322 11 1222346888888888874443
No 314
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=93.53 E-value=0.064 Score=59.33 Aligned_cols=171 Identities=10% Similarity=-0.045 Sum_probs=93.8
Q ss_pred CCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCCC-EE-EEEECCCeEEEEeCCC----cEEE-EEeCCCCCEEEEEEeC
Q psy7057 57 WDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-II-VTGCADKTIKLHSEEG----EFLK-TLTGHTDCVRGLAVLN 129 (557)
Q Consensus 57 ~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l-~sgs~dg~I~vwd~~~----~~~~-~l~~h~~~V~~l~~~~ 129 (557)
....|+..++.+.+....+. ....+..++|.+.+ .| ++-...+.|+.++..+ .... .+.........|++.+
T Consensus 384 ~~~~I~~id~~~~~~~~~~~-~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~ 462 (699)
T 1n7d_A 384 NRHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDW 462 (699)
T ss_dssp CTTC-CEECTTSCCEECCSC-CCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCC
T ss_pred CccceEEEeCCCCcceeeec-cCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEe
Confidence 34577888877665443333 23345678888744 44 4444567888888654 1111 1111122345677764
Q ss_pred C-Ce-EEEEECCCeEEEEECCCCeEEEEEeCCCCcEEEEEEc--CC-EEEEEeCC-CeEEEEECCCC--ceEe-eCCccE
Q psy7057 130 D-TD-FVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAAH--GD-LITSGGED-QCVCVYQNKAQ--NSFM-IPAMSV 200 (557)
Q Consensus 130 ~-~~-lvs~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~~--~~-~l~s~s~D-g~I~iwd~~~~--~~~~-~~~~~v 200 (557)
. +. +++-...+.|.+.++........+.........|+++ +. ++++-... +.|..+++... ..+. ..-...
T Consensus 463 ~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~P 542 (699)
T 1n7d_A 463 IHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWP 542 (699)
T ss_dssp SSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSSC
T ss_pred eCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCc
Confidence 3 44 4455567889999976544333222222344566663 33 34433222 67777775433 2221 122345
Q ss_pred EEEEEcCCCc-E-EEEEcCCcEEEEecCCC
Q psy7057 201 WAVAILPNSD-I-VTGSSDGIVRVFSANPD 228 (557)
Q Consensus 201 ~~v~~~p~g~-l-~sg~~Dg~I~iwd~~~~ 228 (557)
..|++.|++. | ++-+..+.|.+++++..
T Consensus 543 nGlavd~~~~~LY~aD~~~~~I~~~d~dG~ 572 (699)
T 1n7d_A 543 NGITLDLLSGRLYWVDSKLHSISSIDVNGG 572 (699)
T ss_dssp CCEEECTTTCCEEEEETTTTEEEEECSSSS
T ss_pred cEEEEeccCCEEEEEecCCCeEEEEccCCC
Confidence 6899998765 4 45556778999998753
No 315
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=93.31 E-value=0.076 Score=58.70 Aligned_cols=176 Identities=14% Similarity=0.011 Sum_probs=100.0
Q ss_pred cEEEEEEcCCC-cEEEE-ECCCcEEEEcCCC--------------------CCCCCCC-CEEEEEECCCeEEEEECCCCe
Q psy7057 14 DVRSLSVTPDG-CILSA-SRDKSAKLWKPND--------------------LSPGAKV-NTLLSASWDMTAKLWCLESQQ 70 (557)
Q Consensus 14 ~V~~l~~spdg-~l~sg-s~Dg~V~iWd~~~--------------------~~~~~~~-~~l~sgs~Dg~i~iwd~~~~~ 70 (557)
.+..|+|.+.+ .|+.+ ...+.|+.+++.. ++++..+ .++++-...+.|.++++....
T Consensus 407 ~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~ 486 (699)
T 1n7d_A 407 NVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK 486 (699)
T ss_dssp TCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSCC
T ss_pred ceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCCc
Confidence 45678888754 45433 4557788877652 2222222 333333456778888876544
Q ss_pred EEEEEcccCCcEEEEEEcCC-CEEEEEEC-C-CeEEEEeCCCcEEEEEe-CCCCCEEEEEEeCC-CeE-EEEECCCeEEE
Q psy7057 71 CKLTIRQHEMAVWGVIQLAN-GIIVTGCA-D-KTIKLHSEEGEFLKTLT-GHTDCVRGLAVLND-TDF-VSCSNDASIRV 144 (557)
Q Consensus 71 ~~~~l~~h~~~V~~l~~~~~-~~l~sgs~-d-g~I~vwd~~~~~~~~l~-~h~~~V~~l~~~~~-~~l-vs~s~Dg~I~v 144 (557)
....+.........|++.|. +.|+.... . +.|.+.++.+.....+. ..-.....|+++++ +.| ++-+..+.|..
T Consensus 487 ~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~ 566 (699)
T 1n7d_A 487 RKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISS 566 (699)
T ss_dssp EEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEE
T ss_pred eEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEE
Confidence 33333322344567888885 44443332 2 67888777665544442 22345678999986 444 45566788999
Q ss_pred EECCCCeEEEEEeC---CCCcEEEEEEcCCE-EEEEeCCCeEEEEECCCC
Q psy7057 145 WDSTTGKCVHTMYG---HPNFIYSVAAHGDL-ITSGGEDQCVCVYQNKAQ 190 (557)
Q Consensus 145 wd~~~~~~~~~~~~---h~~~V~~l~~~~~~-l~s~s~Dg~I~iwd~~~~ 190 (557)
+++.... ...+.. .-.....|+++++. +++....+.|..++..+.
T Consensus 567 ~d~dG~~-~~~~~~~~~~~~~P~glavd~~~lywtd~~~~~V~~~d~~~G 615 (699)
T 1n7d_A 567 IDVNGGN-RKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTG 615 (699)
T ss_dssp ECSSSSC-CEEECCCSSSCSSCCCCEEETTEEEEECSTTTCEEEEETTTE
T ss_pred EccCCCc-eEEEEecCCcCCCceEeEEECCEEEEEeCCCCeEEEEEccCC
Confidence 9986432 233321 12233456665554 445556678888886544
No 316
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=92.99 E-value=7.5 Score=38.25 Aligned_cols=240 Identities=10% Similarity=0.055 Sum_probs=152.5
Q ss_pred CCcEEEEcCCC-------------CCCCCCCCEEEEEECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCCCEEEEEEC
Q psy7057 32 DKSAKLWKPND-------------LSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCA 98 (557)
Q Consensus 32 Dg~V~iWd~~~-------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~~l~sgs~ 98 (557)
+..|.|-|+.+ .-.+|..+.|+.-. ..++.++|+++.+.+..+.- ...|.--.|.....|+.-+
T Consensus 48 ~~~VvIiDl~n~~~~~Rrpi~AdsAIMnP~~~ViALra-g~~LQiFnletK~klks~~~-~e~VvfWkWis~~~L~lVT- 124 (365)
T 2xzh_A 48 QAQVVIIDMNDPSNPIRRPISADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISLNTVALVT- 124 (365)
T ss_dssp EEEEEEEETTSTTSCEEEECCCSEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEEC-SSCEEEEEECSSSEEEEEE-
T ss_pred CCEEEEEECCCCCCccccccccceeeeCCCccEEEEec-CCeEEEechHHhhhhcceec-CCccEEEEecCCCeEEEEc-
Confidence 33677777766 11244566666655 78999999999988887764 4577778888877544443
Q ss_pred CCeEEEEeCCC--cEEEEEeCCC----CCEEEEEEeCCCe-EE-EEE------CCCeEEEEECCCCeEEEEEeCCCCcEE
Q psy7057 99 DKTIKLHSEEG--EFLKTLTGHT----DCVRGLAVLNDTD-FV-SCS------NDASIRVWDSTTGKCVHTMYGHPNFIY 164 (557)
Q Consensus 99 dg~I~vwd~~~--~~~~~l~~h~----~~V~~l~~~~~~~-lv-s~s------~Dg~I~vwd~~~~~~~~~~~~h~~~V~ 164 (557)
+..|.-|+..+ .+.+.+..|. ..|..-..+++.+ ++ +|- -.|.+.+|... .+..+.+.+|.+...
T Consensus 125 ~taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~e-r~~sQ~ieGhaa~F~ 203 (365)
T 2xzh_A 125 DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVD-RKVSQPIEGHAASFA 203 (365)
T ss_dssp SSEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETT-TTEEEEECCSEEEEE
T ss_pred CCcEEEEcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeec-ccccceeeeeeeeeE
Confidence 46789999643 5677776654 3466666677766 22 222 23678899965 556677888877666
Q ss_pred EEEEcCC----EEEEEeC----CCeEEEEECCCC----ce-----Ee--e----CCccEEEEEEcCCCc-EEEEEcCCcE
Q psy7057 165 SVAAHGD----LITSGGE----DQCVCVYQNKAQ----NS-----FM--I----PAMSVWAVAILPNSD-IVTGSSDGIV 220 (557)
Q Consensus 165 ~l~~~~~----~l~s~s~----Dg~I~iwd~~~~----~~-----~~--~----~~~~v~~v~~~p~g~-l~sg~~Dg~I 220 (557)
.+..+|+ .|++-.. .+.+++-++... .. .. . ..+...++.+++... +..-+.-|.|
T Consensus 204 ~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyviTK~G~i 283 (365)
T 2xzh_A 204 QFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYI 283 (365)
T ss_dssp EECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEETTSEE
T ss_pred EEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEEEeCCcEE
Confidence 6655433 2333222 258888886332 11 11 1 134556777777655 6788899999
Q ss_pred EEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecCCChhhHH
Q psy7057 221 RVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPDRQAED 278 (557)
Q Consensus 221 ~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~~~~~~~ 278 (557)
++||+.++........ ......+........++++....|.|.--.++++...+-
T Consensus 284 hlyDleTgt~i~~nrI---S~d~iF~ta~~~~~~Gi~~Vnr~GqVl~v~v~~~~ivpy 338 (365)
T 2xzh_A 284 HLYDLETGTCIYMNRI---SGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENIIPY 338 (365)
T ss_dssp EEEETTTCCEEEEEEC---CSSCEEEEEEEGGGTEEEEEETTCEEEEEEECTTTHHHH
T ss_pred EEEEcccCcEEEEecc---CCCceEEecccCCCCcEEEEcCCCEEEEEEECcccEehh
Confidence 9999999876532211 111222223333445678888999999999998877654
No 317
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=92.88 E-value=12 Score=40.30 Aligned_cols=174 Identities=7% Similarity=-0.076 Sum_probs=99.3
Q ss_pred ECCCeEEEEECCCCe-EEEEEcccCCcEEEEEEcCC-CEEE-EEECCCeEEEEeCCCcE--EEEEeCCCCCEEEEEEeCC
Q psy7057 56 SWDMTAKLWCLESQQ-CKLTIRQHEMAVWGVIQLAN-GIIV-TGCADKTIKLHSEEGEF--LKTLTGHTDCVRGLAVLND 130 (557)
Q Consensus 56 s~Dg~i~iwd~~~~~-~~~~l~~h~~~V~~l~~~~~-~~l~-sgs~dg~I~vwd~~~~~--~~~l~~h~~~V~~l~~~~~ 130 (557)
.....|+..++.... ....+...-..+..++|.+. +.|. +-...+.|..++.++.. ...+...-.....|++.+.
T Consensus 15 ~~~~~I~~i~~~~~~~~~~~~~~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~ 94 (619)
T 3s94_A 15 ANRRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWL 94 (619)
T ss_dssp ECSSBEEEECCC---------CBCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETT
T ss_pred eccccEEEEeCCCCcceEEEEEcCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEec
Confidence 445678888887543 22223334456778999984 4444 44456788888876652 2233333357899999974
Q ss_pred -CeEE-EEECCCeEEEEECCCCeEEEEEeCCCCcEEEEEEcC--CEEEEEeC--CCeEEEEECCCC--ceEe-eCCccEE
Q psy7057 131 -TDFV-SCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAAHG--DLITSGGE--DQCVCVYQNKAQ--NSFM-IPAMSVW 201 (557)
Q Consensus 131 -~~lv-s~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~~~--~~l~s~s~--Dg~I~iwd~~~~--~~~~-~~~~~v~ 201 (557)
+.++ +-...+.|.+.++........+...-.....|++++ ..|+.... .+.|...++... ..+. ..-....
T Consensus 95 ~~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~~~~P~ 174 (619)
T 3s94_A 95 GEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPN 174 (619)
T ss_dssp TTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSSEE
T ss_pred CCEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeCCCCCCc
Confidence 5544 666778999999764433222223344566777743 34444432 456666665433 2232 2334678
Q ss_pred EEEEcCCCc-EE-EEEcCCcEEEEecCCCC
Q psy7057 202 AVAILPNSD-IV-TGSSDGIVRVFSANPDR 229 (557)
Q Consensus 202 ~v~~~p~g~-l~-sg~~Dg~I~iwd~~~~~ 229 (557)
.+++.+++. |. +=...+.|..++++...
T Consensus 175 Glald~~~~~LY~aD~~~~~I~~~~~dG~~ 204 (619)
T 3s94_A 175 GLTLDYEEQKLYWADAKLNFIHKSNLDGTN 204 (619)
T ss_dssp EEEEETTTTEEEEEETTTCCEEEESSSCCE
T ss_pred EEEEEccCCEEEEEeCCCCeEEEecCCCCc
Confidence 999998655 44 44456788888887643
No 318
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=92.60 E-value=2.4 Score=39.32 Aligned_cols=125 Identities=8% Similarity=-0.071 Sum_probs=76.2
Q ss_pred ccEEEEEEcCCCcEEEEECCCcEEEEcCCC-----------------------CCCCCCCCEEEEEECCCeEEEEECCCC
Q psy7057 13 MDVRSLSVTPDGCILSASRDKSAKLWKPND-----------------------LSPGAKVNTLLSASWDMTAKLWCLESQ 69 (557)
Q Consensus 13 ~~V~~l~~spdg~l~sgs~Dg~V~iWd~~~-----------------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~ 69 (557)
..+++++|+|+|.|.+. .+|.+.--+..+ +.+++++.+.++ .||.|.-++..+.
T Consensus 41 ~~~~~laf~P~G~LYaV-~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~~ 117 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV-LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQS 117 (236)
T ss_dssp TTCSEEEECTTSCEEEE-ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCCS
T ss_pred ccceeEEECCCccEEEE-eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe--CCCEEEEeCCCcC
Confidence 36779999999997777 778776666533 455677777777 5688877775332
Q ss_pred eE-------EEEEcccCCcEEEEEEcCCCEEEEEECCCeEEEEeCC-Cc------EEEEEe-CCCCCEEEEEEeCCCeEE
Q psy7057 70 QC-------KLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHSEE-GE------FLKTLT-GHTDCVRGLAVLNDTDFV 134 (557)
Q Consensus 70 ~~-------~~~l~~h~~~V~~l~~~~~~~l~sgs~dg~I~vwd~~-~~------~~~~l~-~h~~~V~~l~~~~~~~lv 134 (557)
.. ...-..-=..+.+|.+.|+|.|.... |+.+.-+... +. ....+- .....-+.+.+.+++.|.
T Consensus 118 ~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~-dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G~l~ 196 (236)
T 1tl2_A 118 DTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH-GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVGTLF 196 (236)
T ss_dssp TTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE-TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTSCEE
T ss_pred CCCceeccccEeccCCCCceEEEEECCCceEEEEe-CCcEEecCCCCCCCcccccccceeccCCcceEEEEEECCCCcEE
Confidence 10 11111122567899999999777777 8886544311 11 011111 233344556678888776
Q ss_pred EEECCCeE
Q psy7057 135 SCSNDASI 142 (557)
Q Consensus 135 s~s~Dg~I 142 (557)
..+ ++.+
T Consensus 197 ~v~-~g~~ 203 (236)
T 1tl2_A 197 GVQ-GGKF 203 (236)
T ss_dssp EEE-TTEE
T ss_pred EEe-CCeE
Confidence 666 6643
No 319
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=91.91 E-value=12 Score=38.22 Aligned_cols=239 Identities=10% Similarity=0.070 Sum_probs=151.7
Q ss_pred CcEEEEcCCC-------------CCCCCCCCEEEEEECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCCCEEEEEECC
Q psy7057 33 KSAKLWKPND-------------LSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCAD 99 (557)
Q Consensus 33 g~V~iWd~~~-------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~~l~sgs~d 99 (557)
..|.|-|+.+ .-.+|..+.|+--. ..++.|+|+++.+.+..+.-.+ .|.--.|..+..|+.. .+
T Consensus 48 ~~vvIiDl~~~~~~~rrpi~AdsAIMnP~~~iiALra-g~~lQiFnle~K~klks~~~~e-~VvfWkWis~~~l~lV-T~ 124 (494)
T 1bpo_A 48 AQVVIIDMNDPSNPIRRPISADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTD-DVTFWKWISLNTVALV-TD 124 (494)
T ss_dssp CEEEEEETTSTTSCEEEECCCSEEEECSSSSCEEEEE-TTEEEEEETTTTEEEEEEECSS-CCCEEEEEETTEEEEE-CS
T ss_pred CeEEEEECCCCCcceecccccceeeeCCCCcEEEEec-CCeEEEEchHHhhhhcceecCC-CceEEEecCCCeEEEE-cC
Confidence 3677777765 11234455555554 7899999999988888776444 5556677766644433 35
Q ss_pred CeEEEEeCCC--cEEEEEeCCC----CCEEEEEEeCCCe-EE-EEE------CCCeEEEEECCCCeEEEEEeCCCCcEEE
Q psy7057 100 KTIKLHSEEG--EFLKTLTGHT----DCVRGLAVLNDTD-FV-SCS------NDASIRVWDSTTGKCVHTMYGHPNFIYS 165 (557)
Q Consensus 100 g~I~vwd~~~--~~~~~l~~h~----~~V~~l~~~~~~~-lv-s~s------~Dg~I~vwd~~~~~~~~~~~~h~~~V~~ 165 (557)
..|.-|+..+ .+.+.+..|. ..|..-..+++.+ ++ +|- -.|.+.+|... .+..+.+.+|.+....
T Consensus 125 taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~e-r~~sQ~ieGhaa~F~~ 203 (494)
T 1bpo_A 125 NAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVD-RKVSQPIEGHAASFAQ 203 (494)
T ss_dssp SEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEEST-TCCEEEECCSEEEEEE
T ss_pred CeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeecc-ccccchheeeeeeeEE
Confidence 6899999643 5677776654 3566666677766 22 222 23678899965 4556778888877766
Q ss_pred EEEcCC----EEEE-EeC---CCeEEEEECCCC----c-----eEe------eCCccEEEEEEcCCCc-EEEEEcCCcEE
Q psy7057 166 VAAHGD----LITS-GGE---DQCVCVYQNKAQ----N-----SFM------IPAMSVWAVAILPNSD-IVTGSSDGIVR 221 (557)
Q Consensus 166 l~~~~~----~l~s-~s~---Dg~I~iwd~~~~----~-----~~~------~~~~~v~~v~~~p~g~-l~sg~~Dg~I~ 221 (557)
+..+|+ .|++ +.. .+.+++-++... . ... ...+...++.+++... +..-+.-|.|+
T Consensus 204 ~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~i~ 283 (494)
T 1bpo_A 204 FKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIH 283 (494)
T ss_dssp EECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSEEE
T ss_pred EecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecCceEE
Confidence 666443 2333 322 278899886432 1 111 1134566777887766 77888999999
Q ss_pred EEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecCCChhhHH
Q psy7057 222 VFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPDRQAED 278 (557)
Q Consensus 222 iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~~~~~~~ 278 (557)
+||+.++....... .......+........++++....|.|.--.+++....+-
T Consensus 284 lyDleTgt~i~~nr---Is~~~iF~t~~~~~~~Gi~~Vnr~GqVl~v~v~e~~ivpy 337 (494)
T 1bpo_A 284 LYDLETGTCIYMNR---ISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENIIPY 337 (494)
T ss_dssp EEETTTCCEEEEEE---CCSSCEEEEEEETTTTEEEEEETTCEEEEEEECTTTHHHH
T ss_pred EEecccceeeeeec---ccCCceEEecccCCCCcEEEEccCceEEEEEEccccchhh
Confidence 99999987653222 1122222333333444678888999999999998876553
No 320
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=91.42 E-value=6.5 Score=37.54 Aligned_cols=166 Identities=16% Similarity=0.229 Sum_probs=77.6
Q ss_pred eEEEEECCCCeEEEE--EcccCCcEEEEEEcCCCEEEEEECC-----CeEEEEeCCCcEEEEEeC---CCCCEEEEEEeC
Q psy7057 60 TAKLWCLESQQCKLT--IRQHEMAVWGVIQLANGIIVTGCAD-----KTIKLHSEEGEFLKTLTG---HTDCVRGLAVLN 129 (557)
Q Consensus 60 ~i~iwd~~~~~~~~~--l~~h~~~V~~l~~~~~~~l~sgs~d-----g~I~vwd~~~~~~~~l~~---h~~~V~~l~~~~ 129 (557)
.+..||+.+.+-... +......- +++...+.+++.|+.+ ..+.+||.....-..+.. .... .+++..
T Consensus 31 ~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~-~~~~~~- 107 (302)
T 2xn4_A 31 SVECYDFKEERWHQVAELPSRRCRA-GMVYMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRST-LGAAVL- 107 (302)
T ss_dssp CEEEEETTTTEEEEECCCSSCCBSC-EEEEETTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBS-CEEEEE-
T ss_pred cEEEEcCcCCcEeEcccCCcccccc-eEEEECCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccc-eEEEEE-
Confidence 466777776542211 11111111 2222333366666654 347778854443333321 1111 122223
Q ss_pred CCe-EEEEECCC-----eEEEEECCCCeEEEE--EeCCCCcEEEEEEcCCEEEEEeCC-------CeEEEEECCCC--ce
Q psy7057 130 DTD-FVSCSNDA-----SIRVWDSTTGKCVHT--MYGHPNFIYSVAAHGDLITSGGED-------QCVCVYQNKAQ--NS 192 (557)
Q Consensus 130 ~~~-lvs~s~Dg-----~I~vwd~~~~~~~~~--~~~h~~~V~~l~~~~~~l~s~s~D-------g~I~iwd~~~~--~~ 192 (557)
++. ++.|+.++ .+.+||+.+.+-... +........++..++.+++.|+.+ ..+.+||..+. ..
T Consensus 108 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~ 187 (302)
T 2xn4_A 108 NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVVGGLLYAVGGYDVASRQCLSTVECYNATTNEWTY 187 (302)
T ss_dssp TTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETTTTEECCCEEEEETTTTEEEE
T ss_pred CCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEE
Confidence 344 55666543 477888876653322 111111222333466666666542 35888997665 22
Q ss_pred EeeCCcc--EEEEEEcCCCc-EEEEEcC-----CcEEEEecCCCC
Q psy7057 193 FMIPAMS--VWAVAILPNSD-IVTGSSD-----GIVRVFSANPDR 229 (557)
Q Consensus 193 ~~~~~~~--v~~v~~~p~g~-l~sg~~D-----g~I~iwd~~~~~ 229 (557)
+.....+ -.+++.. ++. ++.|+.+ ..+.+||..+..
T Consensus 188 ~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 231 (302)
T 2xn4_A 188 IAEMSTRRSGAGVGVL-NNLLYAVGGHDGPLVRKSVEVYDPTTNA 231 (302)
T ss_dssp ECCCSSCCBSCEEEEE-TTEEEEECCBSSSSBCCCEEEEETTTTE
T ss_pred CCCCccccccccEEEE-CCEEEEECCCCCCcccceEEEEeCCCCC
Confidence 2211111 1122222 455 5666654 368888877643
No 321
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=91.30 E-value=13 Score=37.07 Aligned_cols=132 Identities=15% Similarity=0.211 Sum_probs=76.3
Q ss_pred EEEEEEcCCCcEEEEE-------------CCCcEEEEcCCC-------CC-----C-----CC---------CCC-EEEE
Q psy7057 15 VRSLSVTPDGCILSAS-------------RDKSAKLWKPND-------LS-----P-----GA---------KVN-TLLS 54 (557)
Q Consensus 15 V~~l~~spdg~l~sgs-------------~Dg~V~iWd~~~-------~~-----~-----~~---------~~~-~l~s 54 (557)
.-+++..|+|.+++++ .+|.|.++|+.+ +. + .| ++. +|+.
T Consensus 52 ~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~V 131 (355)
T 3sre_A 52 SEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLV 131 (355)
T ss_dssp CCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEE
T ss_pred cceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEE
Confidence 4456678988866665 689999999873 11 1 11 122 3333
Q ss_pred EE-C--CCeEEEEECCCC--e--EEEEEccc-CCcEEEEEEcCCCEEEEEEC------------------CCeEEEEeCC
Q psy7057 55 AS-W--DMTAKLWCLESQ--Q--CKLTIRQH-EMAVWGVIQLANGIIVTGCA------------------DKTIKLHSEE 108 (557)
Q Consensus 55 gs-~--Dg~i~iwd~~~~--~--~~~~l~~h-~~~V~~l~~~~~~~l~sgs~------------------dg~I~vwd~~ 108 (557)
+. . +.++.+|++... . .+.++.+. -...+.+++.++|.+..++. .+.+..++.
T Consensus 132 vnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~- 210 (355)
T 3sre_A 132 VNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP- 210 (355)
T ss_dssp EECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT-
T ss_pred EECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC-
Confidence 32 2 456667665442 2 23334332 34678888888885444432 234544543
Q ss_pred CcEEEEEeCCCCCEEEEEEeCCCe--EEEEECCCeEEEEECC
Q psy7057 109 GEFLKTLTGHTDCVRGLAVLNDTD--FVSCSNDASIRVWDST 148 (557)
Q Consensus 109 ~~~~~~l~~h~~~V~~l~~~~~~~--lvs~s~Dg~I~vwd~~ 148 (557)
++ +..+...-...+.++|+|+++ +++-+..+.|..|++.
T Consensus 211 ~~-~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~ 251 (355)
T 3sre_A 211 ND-VRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKH 251 (355)
T ss_dssp TC-CEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEEC
T ss_pred Ce-EEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEEC
Confidence 22 222322334578999999985 3455667889999875
No 322
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=91.08 E-value=10 Score=36.20 Aligned_cols=166 Identities=11% Similarity=0.131 Sum_probs=79.1
Q ss_pred CeEEEEECCCCeEEE--EEcccCCcEEEEEEcCCCEEEEEECC----CeEEEEeCCCcEEEEEeC---CCCCEEEEEEeC
Q psy7057 59 MTAKLWCLESQQCKL--TIRQHEMAVWGVIQLANGIIVTGCAD----KTIKLHSEEGEFLKTLTG---HTDCVRGLAVLN 129 (557)
Q Consensus 59 g~i~iwd~~~~~~~~--~l~~h~~~V~~l~~~~~~~l~sgs~d----g~I~vwd~~~~~~~~l~~---h~~~V~~l~~~~ 129 (557)
..+.+||+.+.+-.. .+....... +++...+.+++.|+.+ ..+.++|.....-..+.. ..... +++..
T Consensus 24 ~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~~- 100 (306)
T 3ii7_A 24 QSCRYFNPKDYSWTDIRCPFEKRRDA-ACVFWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSL-AACAA- 100 (306)
T ss_dssp TSEEEEETTTTEEEECCCCSCCCBSC-EEEEETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSC-EEEEE-
T ss_pred ceEEEecCCCCCEecCCCCCccccee-EEEEECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccce-eEEEE-
Confidence 457777877654221 111111111 2222233366667654 567778854433222221 11112 22223
Q ss_pred CCe-EEEEECC------CeEEEEECCCCeEEEE--EeCCCCcEEEEEEcCCEEEEEeC---------CCeEEEEECCCC-
Q psy7057 130 DTD-FVSCSND------ASIRVWDSTTGKCVHT--MYGHPNFIYSVAAHGDLITSGGE---------DQCVCVYQNKAQ- 190 (557)
Q Consensus 130 ~~~-lvs~s~D------g~I~vwd~~~~~~~~~--~~~h~~~V~~l~~~~~~l~s~s~---------Dg~I~iwd~~~~- 190 (557)
++. ++.|+.+ ..+.+||+.+.+-... +......-.++..++.+++.|+. -..+.+||..+.
T Consensus 101 ~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~ 180 (306)
T 3ii7_A 101 EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATET 180 (306)
T ss_dssp TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEESCTTTCEECCCEEEEETTTTE
T ss_pred CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEECCEEEEECCCCCCCCcccccceEEEeCCCCCe
Confidence 455 5566654 4588899887653322 11111122233346666666653 345888997665
Q ss_pred -ceEeeCCcc--EEEEEEcCCCc-EEEEEcC-----CcEEEEecCCC
Q psy7057 191 -NSFMIPAMS--VWAVAILPNSD-IVTGSSD-----GIVRVFSANPD 228 (557)
Q Consensus 191 -~~~~~~~~~--v~~v~~~p~g~-l~sg~~D-----g~I~iwd~~~~ 228 (557)
..+.....+ -.+++.. +++ ++.|+.+ ..+.+||..+.
T Consensus 181 W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~yd~~~~ 226 (306)
T 3ii7_A 181 WTELCPMIEARKNHGLVFV-KDKIFAVGGQNGLGGLDNVEYYDIKLN 226 (306)
T ss_dssp EEEECCCSSCCBSCEEEEE-TTEEEEECCEETTEEBCCEEEEETTTT
T ss_pred EEECCCccchhhcceEEEE-CCEEEEEeCCCCCCCCceEEEeeCCCC
Confidence 333211111 1122222 555 5566543 45788887765
No 323
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=91.07 E-value=7.4 Score=37.05 Aligned_cols=166 Identities=20% Similarity=0.216 Sum_probs=78.1
Q ss_pred eEEEEECCCCeEEE--EEcccCCcEEEEEEcCCCEEEEEECC-----CeEEEEeCCCcE---EEEE---eCCCCCEEEEE
Q psy7057 60 TAKLWCLESQQCKL--TIRQHEMAVWGVIQLANGIIVTGCAD-----KTIKLHSEEGEF---LKTL---TGHTDCVRGLA 126 (557)
Q Consensus 60 ~i~iwd~~~~~~~~--~l~~h~~~V~~l~~~~~~~l~sgs~d-----g~I~vwd~~~~~---~~~l---~~h~~~V~~l~ 126 (557)
.+.+||+.+.+-.. .+....... +++...+.+++.|+.+ ..+.+||..... -..+ ........ ++
T Consensus 32 ~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~-~~ 109 (301)
T 2vpj_A 32 VVEKYDPKTQEWSFLPSITRKRRYV-ASVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAG-AT 109 (301)
T ss_dssp CEEEEETTTTEEEECCCCSSCCBSC-EEEEETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCE-EE
T ss_pred EEEEEcCCCCeEEeCCCCChhhccc-cEEEECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCcccee-EE
Confidence 56777776654221 111111111 2222333366666654 357788843222 1222 11111122 22
Q ss_pred EeCCCe-EEEEECC-----CeEEEEECCCCeEE--EEEeCCCCcEEEEEEcCCEEEEEeCC-----CeEEEEECCCC--c
Q psy7057 127 VLNDTD-FVSCSND-----ASIRVWDSTTGKCV--HTMYGHPNFIYSVAAHGDLITSGGED-----QCVCVYQNKAQ--N 191 (557)
Q Consensus 127 ~~~~~~-lvs~s~D-----g~I~vwd~~~~~~~--~~~~~h~~~V~~l~~~~~~l~s~s~D-----g~I~iwd~~~~--~ 191 (557)
.. ++. ++.|+.+ ..+.++|+.+.+-. ..+......-.++..++.+++.|+.+ ..+.+||..+. .
T Consensus 110 ~~-~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~ 188 (301)
T 2vpj_A 110 TL-GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVASGVIYCLGGYDGLNILNSVEKYDPHTGHWT 188 (301)
T ss_dssp EE-TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEE
T ss_pred EE-CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEECCEEEEECCCCCCcccceEEEEeCCCCcEE
Confidence 22 455 4555543 35888998776532 22221112222333467777777654 45888997665 3
Q ss_pred eEeeCCcc-E-EEEEEcCCCc-EEEEEcC-----CcEEEEecCCCC
Q psy7057 192 SFMIPAMS-V-WAVAILPNSD-IVTGSSD-----GIVRVFSANPDR 229 (557)
Q Consensus 192 ~~~~~~~~-v-~~v~~~p~g~-l~sg~~D-----g~I~iwd~~~~~ 229 (557)
.+.....+ . .+++.. ++. ++.|+.+ ..+.+||..+..
T Consensus 189 ~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 233 (301)
T 2vpj_A 189 NVTPMATKRSGAGVALL-NDHIYVVGGFDGTAHLSSVEAYNIRTDS 233 (301)
T ss_dssp EECCCSSCCBSCEEEEE-TTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred eCCCCCcccccceEEEE-CCEEEEEeCCCCCcccceEEEEeCCCCc
Confidence 32211111 1 122222 455 5666654 468888887653
No 324
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=90.02 E-value=18 Score=36.83 Aligned_cols=125 Identities=14% Similarity=0.058 Sum_probs=82.6
Q ss_pred CCeEEEEeCC-CcEEEEEeCC----CCCEEEEEEeCCCeEEEEECCCeEEEEECCCCe------------EEEEEeC---
Q psy7057 99 DKTIKLHSEE-GEFLKTLTGH----TDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGK------------CVHTMYG--- 158 (557)
Q Consensus 99 dg~I~vwd~~-~~~~~~l~~h----~~~V~~l~~~~~~~lvs~s~Dg~I~vwd~~~~~------------~~~~~~~--- 158 (557)
++.||.-+.. ...-+.+... -..|..+..+|+|.+++-..+..|.|-.+..+. ..+.+.-
T Consensus 40 ~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~ 119 (452)
T 3pbp_A 40 DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFNDNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEE 119 (452)
T ss_dssp TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECSSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGC
T ss_pred CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecCCeEEEEEecCccccCcccccccccceeEEEcCCc
Confidence 4667766633 3233334322 235788999999999988888999998876321 1233332
Q ss_pred ---CCCcEEEEEE-----cCCEEEEEeCCCeEEEEECCCC----ceEee---------CCccEEEEEEcCCCc-EEEEE-
Q psy7057 159 ---HPNFIYSVAA-----HGDLITSGGEDQCVCVYQNKAQ----NSFMI---------PAMSVWAVAILPNSD-IVTGS- 215 (557)
Q Consensus 159 ---h~~~V~~l~~-----~~~~l~s~s~Dg~I~iwd~~~~----~~~~~---------~~~~v~~v~~~p~g~-l~sg~- 215 (557)
....|..+.| ++..|++-..|++||+||+... ..+.. ....|.+++|.+++- |...+
T Consensus 120 ~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~ 199 (452)
T 3pbp_A 120 EVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNT 199 (452)
T ss_dssp C--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEEEECTTSSCEEEEEC
T ss_pred ccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCcchhccccccCCCcccceEEEEEEcCCCcEEEEEec
Confidence 2567999999 4568999999999999996642 11211 114678899998765 55544
Q ss_pred -cCCcEEEE
Q psy7057 216 -SDGIVRVF 223 (557)
Q Consensus 216 -~Dg~I~iw 223 (557)
+.|.|+-.
T Consensus 200 t~~GDIYAl 208 (452)
T 3pbp_A 200 TEGGDIFAF 208 (452)
T ss_dssp TTSCEEEEE
T ss_pred CCCCCEEEE
Confidence 67776654
No 325
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=90.01 E-value=16 Score=43.04 Aligned_cols=239 Identities=11% Similarity=0.067 Sum_probs=140.8
Q ss_pred CCcEEEEcCCC-------------CCCCCCCCEEEEEECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCCCEEEEEEC
Q psy7057 32 DKSAKLWKPND-------------LSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCA 98 (557)
Q Consensus 32 Dg~V~iWd~~~-------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~~l~sgs~ 98 (557)
..+|.|-|+.+ .-.+|..+.|+.- ...++.|+|+++...+.++.- ...|.--.|.....|+..+
T Consensus 47 ~~~vvIidl~~~~~~~rrpi~AdsAIMnP~~~iiALr-ag~~lQiFnl~~k~klks~~~-~e~VvfWkWis~~~l~lVT- 123 (1630)
T 1xi4_A 47 QAQVVIIDMNDPSNPIRRPISADSAIMNPASKVIALK-AGKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISLNTVALVT- 123 (1630)
T ss_pred CceEEEEECCCCCCcccccccchhhccCCCcceEEEe-cCCeEEEeehHHhhhhccccc-CCCceEEEecCCCeeEEEc-
Confidence 34677777765 1223445555544 478999999998777666654 3456667777766443332
Q ss_pred CCeEEEEeCCC--cEEEEEeCC----CCCEEEEEEeCCCe-EE-EE------ECCCeEEEEECCCCeEEEEEeCCCCcEE
Q psy7057 99 DKTIKLHSEEG--EFLKTLTGH----TDCVRGLAVLNDTD-FV-SC------SNDASIRVWDSTTGKCVHTMYGHPNFIY 164 (557)
Q Consensus 99 dg~I~vwd~~~--~~~~~l~~h----~~~V~~l~~~~~~~-lv-s~------s~Dg~I~vwd~~~~~~~~~~~~h~~~V~ 164 (557)
+..|..|+..+ .+.+.+..| ...|..-..+++.+ ++ +| .-.|.+.+|... .+..+.+.||.+...
T Consensus 124 ~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~e-r~~sQ~iegha~~F~ 202 (1630)
T 1xi4_A 124 DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVD-RKVSQPIEGHAASFA 202 (1630)
T ss_pred CCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecc-cccchhhhHhHhhhh
Confidence 46799999644 455555444 34566666667666 22 32 234788899864 344455667766554
Q ss_pred EEEEcC----CEEEEEeC----CCeEEEEECCCC----ceE-------ee----CCccEEEEEEcCCCc-EEEEEcCCcE
Q psy7057 165 SVAAHG----DLITSGGE----DQCVCVYQNKAQ----NSF-------MI----PAMSVWAVAILPNSD-IVTGSSDGIV 220 (557)
Q Consensus 165 ~l~~~~----~~l~s~s~----Dg~I~iwd~~~~----~~~-------~~----~~~~v~~v~~~p~g~-l~sg~~Dg~I 220 (557)
.+..+| ..|++-.. .+.++|-++... ..+ .. ..+...++.+++... +..-+.-|.|
T Consensus 203 ~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~ 282 (1630)
T 1xi4_A 203 QFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYI 282 (1630)
T ss_pred eeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCceE
Confidence 444422 12333222 268888886432 111 11 123345666666655 6678889999
Q ss_pred EEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecCCChhhH
Q psy7057 221 RVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPDRQAE 277 (557)
Q Consensus 221 ~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~~~~~~ 277 (557)
.++|+.++....... .......+........++++....|.|.--.+++....+
T Consensus 283 ~~~d~~t~~~i~~~r---is~~~iF~~~~~~~~~g~~~vnr~G~vl~v~v~~~~iv~ 336 (1630)
T 1xi4_A 283 HLYDLETGTCIYMNR---ISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENIIP 336 (1630)
T ss_pred EEEecccchhhhhcc---ccCCceEEeccCCCCCceEEEcCCceEEEEEEccchhhh
Confidence 999999886643222 222222333333344566777788888888887765543
No 326
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=89.91 E-value=5.3 Score=38.16 Aligned_cols=177 Identities=16% Similarity=0.162 Sum_probs=83.3
Q ss_pred CCEEEEEECC-----CeEEEEECCCCeEEEE--EcccCCcEEEEEEcCCCEEEEEECCC-----eEEEEeCCCcEEEEEe
Q psy7057 49 VNTLLSASWD-----MTAKLWCLESQQCKLT--IRQHEMAVWGVIQLANGIIVTGCADK-----TIKLHSEEGEFLKTLT 116 (557)
Q Consensus 49 ~~~l~sgs~D-----g~i~iwd~~~~~~~~~--l~~h~~~V~~l~~~~~~~l~sgs~dg-----~I~vwd~~~~~~~~l~ 116 (557)
+..++.|+.+ ..+.+||+.+.+-... +....... +++...+.+++.|+.++ .+.+||.....-..+.
T Consensus 62 ~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~ 140 (302)
T 2xn4_A 62 GLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTL-GAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVA 140 (302)
T ss_dssp TEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSC-EEEEETTEEEEEEEECSSCEEEEEEEEETTTTEEEEEC
T ss_pred CEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccce-EEEEECCEEEEEcCCCCCccCceEEEEeCCCCeEeecC
Confidence 3445555543 3577888877642221 11111111 22222333666676553 4667775444333332
Q ss_pred CCC--CCEEEEEEeCCCe-EEEEEC-------CCeEEEEECCCCeEEEE--EeCCCCcEEEEEEcCCEEEEEeCC-----
Q psy7057 117 GHT--DCVRGLAVLNDTD-FVSCSN-------DASIRVWDSTTGKCVHT--MYGHPNFIYSVAAHGDLITSGGED----- 179 (557)
Q Consensus 117 ~h~--~~V~~l~~~~~~~-lvs~s~-------Dg~I~vwd~~~~~~~~~--~~~h~~~V~~l~~~~~~l~s~s~D----- 179 (557)
... ..-.+++.. ++. ++.|+. -..+.+||+.+.+-... +........++..++.+++.|+.+
T Consensus 141 ~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~ 219 (302)
T 2xn4_A 141 PMNTRRSSVGVGVV-GGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVLNNLLYAVGGHDGPLVR 219 (302)
T ss_dssp CCSSCCBSCEEEEE-TTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBSSSSBC
T ss_pred CCCCcccCceEEEE-CCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEEEECCEEEEECCCCCCccc
Confidence 111 111122333 445 445543 23588899877653322 211111223334467777777654
Q ss_pred CeEEEEECCCC--ceEeeCCcc-E-EEEEEcCCCc-EEEEEcCC-----cEEEEecCCC
Q psy7057 180 QCVCVYQNKAQ--NSFMIPAMS-V-WAVAILPNSD-IVTGSSDG-----IVRVFSANPD 228 (557)
Q Consensus 180 g~I~iwd~~~~--~~~~~~~~~-v-~~v~~~p~g~-l~sg~~Dg-----~I~iwd~~~~ 228 (557)
..+.+||..+. ..+...... . .+++.. ++. ++.|+.++ .+.+||..+.
T Consensus 220 ~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~ 277 (302)
T 2xn4_A 220 KSVEVYDPTTNAWRQVADMNMCRRNAGVCAV-NGLLYVVGGDDGSCNLASVEYYNPTTD 277 (302)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEECCBCSSSBCCCEEEEETTTT
T ss_pred ceEEEEeCCCCCEeeCCCCCCccccCeEEEE-CCEEEEECCcCCCcccccEEEEcCCCC
Confidence 36889997665 333211111 1 112222 555 56666543 4777777654
No 327
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=89.65 E-value=17 Score=35.83 Aligned_cols=212 Identities=13% Similarity=0.196 Sum_probs=131.0
Q ss_pred EcCCCcEEEEECCCcEEEEcCCC---------------CCCCCCCCEEEEEECCCeEEEEECCC-CeEEEEEccc----C
Q psy7057 20 VTPDGCILSASRDKSAKLWKPND---------------LSPGAKVNTLLSASWDMTAKLWCLES-QQCKLTIRQH----E 79 (557)
Q Consensus 20 ~spdg~l~sgs~Dg~V~iWd~~~---------------~~~~~~~~~l~sgs~Dg~i~iwd~~~-~~~~~~l~~h----~ 79 (557)
.+|..++++--...++.|+|++. +.|- +.+.|+-.+ +..|.-|++.. ..+...+..| .
T Consensus 74 MnP~~~ViALrag~~LQiFnletK~klks~~~~e~VvfWkWi-s~~~L~lVT-~taVyHWs~~~~s~P~kvFdR~~~L~~ 151 (365)
T 2xzh_A 74 MNPASKVIALKAGKTLQIFNIEMKSKMKAHTMTDDVTFWKWI-SLNTVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAG 151 (365)
T ss_dssp ECSSSSEEEEEETTEEEEEETTTTEEEEEEECSSCEEEEEEC-SSSEEEEEE-SSEEEEEESSTTCCCEEEEECCGGGTT
T ss_pred eCCCccEEEEecCCeEEEechHHhhhhcceecCCccEEEEec-CCCeEEEEc-CCcEEEEcccCCCCCceeeecchhccc
Confidence 46666644443477889998876 2222 233444433 55789999864 3566666555 3
Q ss_pred CcEEEEEEcCCC--EEEEEE------CCCeEEEEeCCCcEEEEEeCCCCCEEEEEEeCC---CeEE-EEEC---CCeEEE
Q psy7057 80 MAVWGVIQLANG--IIVTGC------ADKTIKLHSEEGEFLKTLTGHTDCVRGLAVLND---TDFV-SCSN---DASIRV 144 (557)
Q Consensus 80 ~~V~~l~~~~~~--~l~sgs------~dg~I~vwd~~~~~~~~l~~h~~~V~~l~~~~~---~~lv-s~s~---Dg~I~v 144 (557)
..|..-..+++. .+++|- -.|.+.+|..+.+..+.+.+|......+.+..+ ..++ .+.. .+.+++
T Consensus 152 ~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhI 231 (365)
T 2xzh_A 152 CQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHI 231 (365)
T ss_dssp CEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTEEEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEE
T ss_pred ceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecccccceeeeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEE
Confidence 456666777766 444443 236788999888888999999766555444322 1233 2222 258889
Q ss_pred EECCCC---------eEEEEEeC---CCCcEEEEEEcC--CEEEEEeCCCeEEEEECCCCceE---eeCCccEEEEEEcC
Q psy7057 145 WDSTTG---------KCVHTMYG---HPNFIYSVAAHG--DLITSGGEDQCVCVYQNKAQNSF---MIPAMSVWAVAILP 207 (557)
Q Consensus 145 wd~~~~---------~~~~~~~~---h~~~V~~l~~~~--~~l~s~s~Dg~I~iwd~~~~~~~---~~~~~~v~~v~~~p 207 (557)
-++... +.+..+.. ..+...++..+. ..+..-+.-|.|++||+.+...+ +.....|...+...
T Consensus 232 iEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyviTK~G~ihlyDleTgt~i~~nrIS~d~iF~ta~~~ 311 (365)
T 2xzh_A 232 IEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHE 311 (365)
T ss_dssp EECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEEG
T ss_pred EEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEEEeCCcEEEEEEcccCcEEEEeccCCCceEEecccC
Confidence 887432 12222222 245556676643 46888899999999998887332 33445665555544
Q ss_pred C-CcEEEEEcCCcEEEEecCCCCcchh
Q psy7057 208 N-SDIVTGSSDGIVRVFSANPDRQAED 233 (557)
Q Consensus 208 ~-g~l~sg~~Dg~I~iwd~~~~~~~~~ 233 (557)
. +.++.-...|.|.--.++.....+.
T Consensus 312 ~~~Gi~~Vnr~GqVl~v~v~~~~ivpy 338 (365)
T 2xzh_A 312 ATAGIIGVNRKGQVLSVCVEEENIIPY 338 (365)
T ss_dssp GGTEEEEEETTCEEEEEEECTTTHHHH
T ss_pred CCCcEEEEcCCCEEEEEEECcccEehh
Confidence 4 3388888899888888887665543
No 328
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=89.32 E-value=18 Score=35.69 Aligned_cols=71 Identities=15% Similarity=0.156 Sum_probs=47.1
Q ss_pred CCcEEEEEEcCCCEEEEEECCCeEEEEeCCCcEE--EEEe---CCCCCEEEEEEeCC----CeEE-EEECC-----CeEE
Q psy7057 79 EMAVWGVIQLANGIIVTGCADKTIKLHSEEGEFL--KTLT---GHTDCVRGLAVLND----TDFV-SCSND-----ASIR 143 (557)
Q Consensus 79 ~~~V~~l~~~~~~~l~sgs~dg~I~vwd~~~~~~--~~l~---~h~~~V~~l~~~~~----~~lv-s~s~D-----g~I~ 143 (557)
-...+.++|.|+|.++.+..++.|.+++ .+... ..+. ........|+++|+ +.+. +-+.. ..|.
T Consensus 30 l~~P~~ia~~pdG~l~V~e~~g~I~~i~-~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~ 108 (352)
T 2ism_A 30 LEVPWALAFLPDGGMLIAERPGRIRLFR-EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVV 108 (352)
T ss_dssp CSCEEEEEECTTSCEEEEETTTEEEEEE-TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEE
T ss_pred CCCceEEEEcCCCeEEEEeCCCeEEEEE-CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEE
Confidence 4467799999999777777889999998 55422 1111 12356899999998 5544 43322 5677
Q ss_pred EEECCCC
Q psy7057 144 VWDSTTG 150 (557)
Q Consensus 144 vwd~~~~ 150 (557)
.++...+
T Consensus 109 r~~~~~~ 115 (352)
T 2ism_A 109 RLRHLGE 115 (352)
T ss_dssp EEEECSS
T ss_pred EEEeCCC
Confidence 7876643
No 329
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=89.17 E-value=12 Score=35.70 Aligned_cols=199 Identities=14% Similarity=0.133 Sum_probs=95.3
Q ss_pred EEEEEC--CCcEEEEcCCC-----CCCC-----------CCCCEEEEEECC----CeEEEEECCCCeEEEE--EcccCCc
Q psy7057 26 ILSASR--DKSAKLWKPND-----LSPG-----------AKVNTLLSASWD----MTAKLWCLESQQCKLT--IRQHEMA 81 (557)
Q Consensus 26 l~sgs~--Dg~V~iWd~~~-----~~~~-----------~~~~~l~sgs~D----g~i~iwd~~~~~~~~~--l~~h~~~ 81 (557)
++.|+. ...+.+||..+ +... .++..++.|+.+ ..+.+||+.+.+-... +......
T Consensus 15 ~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~ 94 (306)
T 3ii7_A 15 IALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVFWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDS 94 (306)
T ss_dssp EEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEEETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBS
T ss_pred EEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEEECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccc
Confidence 445554 35678888776 1111 123455566544 5678888887643222 2111111
Q ss_pred EEEEEEcCCCEEEEEECC------CeEEEEeCCCcEEEEEeCC--CCCEEEEEEeCCCe-EEEEEC---------CCeEE
Q psy7057 82 VWGVIQLANGIIVTGCAD------KTIKLHSEEGEFLKTLTGH--TDCVRGLAVLNDTD-FVSCSN---------DASIR 143 (557)
Q Consensus 82 V~~l~~~~~~~l~sgs~d------g~I~vwd~~~~~~~~l~~h--~~~V~~l~~~~~~~-lvs~s~---------Dg~I~ 143 (557)
. +++...+.+++.|+.+ ..+.+||.....-..+... ...-.+++.. ++. ++.|+. -..+.
T Consensus 95 ~-~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~ 172 (306)
T 3ii7_A 95 L-AACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEA-NGLIYVCGGSLGNNVSGRVLNSCE 172 (306)
T ss_dssp C-EEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEECCEESCTTTCEECCCEE
T ss_pred e-eEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEE-CCEEEEECCCCCCCCcccccceEE
Confidence 1 2222233366667655 4577888544433332211 1111122223 445 445542 34588
Q ss_pred EEECCCCeEEEE--EeCCCCcEEEEEEcCCEEEEEeCC-----CeEEEEECCCC--ceEeeC---CccEEEEEEcCCCc-
Q psy7057 144 VWDSTTGKCVHT--MYGHPNFIYSVAAHGDLITSGGED-----QCVCVYQNKAQ--NSFMIP---AMSVWAVAILPNSD- 210 (557)
Q Consensus 144 vwd~~~~~~~~~--~~~h~~~V~~l~~~~~~l~s~s~D-----g~I~iwd~~~~--~~~~~~---~~~v~~v~~~p~g~- 210 (557)
+||+.+.+-... +......-.++..++.+++.|+.+ ..+.+||..+. ..+... .... +++.. ++.
T Consensus 173 ~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~-~~~~~-~~~i 250 (306)
T 3ii7_A 173 VYDPATETWTELCPMIEARKNHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTV-KCAAV-GSIV 250 (306)
T ss_dssp EEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCC-EEEEE-TTEE
T ss_pred EeCCCCCeEEECCCccchhhcceEEEECCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCccce-eEEEE-CCEE
Confidence 999877643222 111111222333366666666643 45788987665 222111 1111 22222 555
Q ss_pred EEEEEcC-----CcEEEEecCCC
Q psy7057 211 IVTGSSD-----GIVRVFSANPD 228 (557)
Q Consensus 211 l~sg~~D-----g~I~iwd~~~~ 228 (557)
++.|+.+ ..+.+||..+.
T Consensus 251 ~v~GG~~~~~~~~~~~~yd~~~~ 273 (306)
T 3ii7_A 251 YVLAGFQGVGRLGHILEYNTETD 273 (306)
T ss_dssp EEEECBCSSSBCCEEEEEETTTT
T ss_pred EEEeCcCCCeeeeeEEEEcCCCC
Confidence 6667744 45777777654
No 330
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=89.01 E-value=22 Score=36.40 Aligned_cols=211 Identities=13% Similarity=0.194 Sum_probs=132.6
Q ss_pred EcCCCcEEEEECCCcEEEEcCCC---------------CCCCCCCCEEEEEECCCeEEEEECCC-CeEEEEEccc----C
Q psy7057 20 VTPDGCILSASRDKSAKLWKPND---------------LSPGAKVNTLLSASWDMTAKLWCLES-QQCKLTIRQH----E 79 (557)
Q Consensus 20 ~spdg~l~sgs~Dg~V~iWd~~~---------------~~~~~~~~~l~sgs~Dg~i~iwd~~~-~~~~~~l~~h----~ 79 (557)
.+|..++++--...++.|+|++. +.|- +.+.|+-. .+..|.-|++.. ..+...+..| .
T Consensus 73 MnP~~~iiALrag~~lQiFnle~K~klks~~~~e~VvfWkWi-s~~~l~lV-T~taVyHWsi~~~s~P~kvFdR~~~L~~ 150 (494)
T 1bpo_A 73 MNPASKVIALKAGKTLQIFNIEMKSKMKAHTMTDDVTFWKWI-SLNTVALV-TDNAVYHWSMEGESQPVKMFDRHSSLAG 150 (494)
T ss_dssp ECSSSSCEEEEETTEEEEEETTTTEEEEEEECSSCCCEEEEE-ETTEEEEE-CSSEEEEEESSSSCCCEEEEECCGGGTT
T ss_pred eCCCCcEEEEecCCeEEEEchHHhhhhcceecCCCceEEEec-CCCeEEEE-cCCeeEEecccCCCCchhheecchhccc
Confidence 46666644433478899999977 1222 12333333 356899999864 3566666655 3
Q ss_pred CcEEEEEEcCCC--EEEEEE------CCCeEEEEeCCCcEEEEEeCCCCCEEEEEEeCC---CeEE-EEECC---CeEEE
Q psy7057 80 MAVWGVIQLANG--IIVTGC------ADKTIKLHSEEGEFLKTLTGHTDCVRGLAVLND---TDFV-SCSND---ASIRV 144 (557)
Q Consensus 80 ~~V~~l~~~~~~--~l~sgs------~dg~I~vwd~~~~~~~~l~~h~~~V~~l~~~~~---~~lv-s~s~D---g~I~v 144 (557)
..|..-..+++. .+++|- -.|.+.+|..+.+..+.+.||......+.+..+ ..++ .+... +.++|
T Consensus 151 ~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi 230 (494)
T 1bpo_A 151 CQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHI 230 (494)
T ss_dssp CEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCCEEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEE
T ss_pred ceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccccchheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEE
Confidence 466666777776 444443 246788999888888899999776665555432 1233 33332 78999
Q ss_pred EECCCC--------e-EEEEEeC---CCCcEEEEEEcC--CEEEEEeCCCeEEEEECCCCceE---eeCCccEEEEEEcC
Q psy7057 145 WDSTTG--------K-CVHTMYG---HPNFIYSVAAHG--DLITSGGEDQCVCVYQNKAQNSF---MIPAMSVWAVAILP 207 (557)
Q Consensus 145 wd~~~~--------~-~~~~~~~---h~~~V~~l~~~~--~~l~s~s~Dg~I~iwd~~~~~~~---~~~~~~v~~v~~~p 207 (557)
-++... + .+..+.. ..+...++..+. ..+..-+.-|.|++||+.+...+ +....+|...+...
T Consensus 231 ~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~i~lyDleTgt~i~~nrIs~~~iF~t~~~~ 310 (494)
T 1bpo_A 231 IEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHE 310 (494)
T ss_dssp EECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEET
T ss_pred EEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecCceEEEEecccceeeeeecccCCceEEecccC
Confidence 988432 1 1111111 234555666643 46888899999999998887322 33445666555555
Q ss_pred CCc-EEEEEcCCcEEEEecCCCCcch
Q psy7057 208 NSD-IVTGSSDGIVRVFSANPDRQAE 232 (557)
Q Consensus 208 ~g~-l~sg~~Dg~I~iwd~~~~~~~~ 232 (557)
... ++.....|.|.--.++......
T Consensus 311 ~~~Gi~~Vnr~GqVl~v~v~e~~ivp 336 (494)
T 1bpo_A 311 ATAGIIGVNRKGQVLSVCVEEENIIP 336 (494)
T ss_dssp TTTEEEEEETTCEEEEEEECTTTHHH
T ss_pred CCCcEEEEccCceEEEEEEccccchh
Confidence 444 8888899999888888766544
No 331
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=88.96 E-value=6.2 Score=37.62 Aligned_cols=176 Identities=14% Similarity=0.147 Sum_probs=83.1
Q ss_pred CCEEEEEECC-----CeEEEEECCCCe-----EEEEEcccCCcEEEEEEcCCCEEEEEECC-----CeEEEEeCCCcEEE
Q psy7057 49 VNTLLSASWD-----MTAKLWCLESQQ-----CKLTIRQHEMAVWGVIQLANGIIVTGCAD-----KTIKLHSEEGEFLK 113 (557)
Q Consensus 49 ~~~l~sgs~D-----g~i~iwd~~~~~-----~~~~l~~h~~~V~~l~~~~~~~l~sgs~d-----g~I~vwd~~~~~~~ 113 (557)
+..++.|+.+ ..+.+||+.+.+ .+..+........ ++...+.+++.|+.+ ..+.++|.....-.
T Consensus 63 ~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~-~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~ 141 (301)
T 2vpj_A 63 DRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAG-ATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWS 141 (301)
T ss_dssp TEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCE-EEEETTEEEEECCBCSSCBCCEEEEEETTTTEEE
T ss_pred CEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCcccee-EEEECCEEEEEcccCCCcccceEEEEcCCCCeEE
Confidence 3445556544 357888877654 2222221111222 222223366666543 35777885443322
Q ss_pred EEe---CCCCCEEEEEEeCCCe-EEEEECC-----CeEEEEECCCCeEEEE--EeCCCCcEEEEEEcCCEEEEEeCC---
Q psy7057 114 TLT---GHTDCVRGLAVLNDTD-FVSCSND-----ASIRVWDSTTGKCVHT--MYGHPNFIYSVAAHGDLITSGGED--- 179 (557)
Q Consensus 114 ~l~---~h~~~V~~l~~~~~~~-lvs~s~D-----g~I~vwd~~~~~~~~~--~~~h~~~V~~l~~~~~~l~s~s~D--- 179 (557)
.+. .....- +++.. ++. ++.|+.+ ..+.+||+.+.+-... +........++..++.+++.|+.+
T Consensus 142 ~~~~~p~~r~~~-~~~~~-~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~ 219 (301)
T 2vpj_A 142 MLGDMQTAREGA-GLVVA-SGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALLNDHIYVVGGFDGTA 219 (301)
T ss_dssp EEEECSSCCBSC-EEEEE-TTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBCSSS
T ss_pred ECCCCCCCcccc-eEEEE-CCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEECCEEEEEeCCCCCc
Confidence 222 111111 22223 455 4566544 4588899877653322 111111223333466677777654
Q ss_pred --CeEEEEECCCC--ceEeeCC-ccE-EEEEEcCCCc-EEEEEcC-----CcEEEEecCCC
Q psy7057 180 --QCVCVYQNKAQ--NSFMIPA-MSV-WAVAILPNSD-IVTGSSD-----GIVRVFSANPD 228 (557)
Q Consensus 180 --g~I~iwd~~~~--~~~~~~~-~~v-~~v~~~p~g~-l~sg~~D-----g~I~iwd~~~~ 228 (557)
..+.+||..+. ..+.... ... .+++.. +++ ++.|+.+ ..+.+||..+.
T Consensus 220 ~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~ 279 (301)
T 2vpj_A 220 HLSSVEAYNIRTDSWTTVTSMTTPRCYVGATVL-RGRLYAIAGYDGNSLLSSIECYDPIID 279 (301)
T ss_dssp BCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEECCBCSSSBEEEEEEEETTTT
T ss_pred ccceEEEEeCCCCcEEECCCCCCcccceeEEEE-CCEEEEEcCcCCCcccccEEEEcCCCC
Confidence 46889997765 3332111 111 122222 555 5566654 34667776543
No 332
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=87.73 E-value=13 Score=35.58 Aligned_cols=128 Identities=11% Similarity=0.045 Sum_probs=60.2
Q ss_pred EEEEECCCCeEEEEEcccCCc--EEEEEEcCCCEEEEEECC--------CeEEEEeCCCcEEEEEeCC--CCCEEEEEEe
Q psy7057 61 AKLWCLESQQCKLTIRQHEMA--VWGVIQLANGIIVTGCAD--------KTIKLHSEEGEFLKTLTGH--TDCVRGLAVL 128 (557)
Q Consensus 61 i~iwd~~~~~~~~~l~~h~~~--V~~l~~~~~~~l~sgs~d--------g~I~vwd~~~~~~~~l~~h--~~~V~~l~~~ 128 (557)
+.+||+.+.+-.. +..-..+ -.+++...+.+++.|+.+ ..+.++|.....-..+..- ...-.+++..
T Consensus 69 ~~~~d~~~~~W~~-~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~ 147 (315)
T 4asc_A 69 FLQFDHLDSEWLG-MPPLPSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLSH 147 (315)
T ss_dssp EEEEETTTTEEEE-CCCBSSCEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE
T ss_pred eEEecCCCCeEEE-CCCCCcchhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEEE
Confidence 6678887764321 1111101 012222223366666632 3477788544332222211 1111122233
Q ss_pred CCCe-EEEEEC-C-----CeEEEEECCCCeEEE--EEeCCCCcEEEEEEcCCEEEEEeCCC-----eEEEEECCCC
Q psy7057 129 NDTD-FVSCSN-D-----ASIRVWDSTTGKCVH--TMYGHPNFIYSVAAHGDLITSGGEDQ-----CVCVYQNKAQ 190 (557)
Q Consensus 129 ~~~~-lvs~s~-D-----g~I~vwd~~~~~~~~--~~~~h~~~V~~l~~~~~~l~s~s~Dg-----~I~iwd~~~~ 190 (557)
+++ ++.|+. + ..+.+||+.+.+-.. .+......-.++..++.+++.|+.++ .+.+||..+.
T Consensus 148 -~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~ 222 (315)
T 4asc_A 148 -MDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITDN 222 (315)
T ss_dssp -TTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEEEEECSSSEEEEEEEEETTTT
T ss_pred -CCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEECCEEEEEeccCCCCccceEEEEECCCC
Confidence 344 556655 2 468889987764322 11111112233344777777777554 5788887665
No 333
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=87.66 E-value=15 Score=35.04 Aligned_cols=180 Identities=11% Similarity=0.043 Sum_probs=97.0
Q ss_pred CcEEEEEEcCCCEEEEEECCCeEEEEeC--CCcEEEEEeCCCCCEEEEEEeCCCeEEEEECCCeEEEEECCCCeEEEEEe
Q psy7057 80 MAVWGVIQLANGIIVTGCADKTIKLHSE--EGEFLKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMY 157 (557)
Q Consensus 80 ~~V~~l~~~~~~~l~sgs~dg~I~vwd~--~~~~~~~l~~h~~~V~~l~~~~~~~lvs~s~Dg~I~vwd~~~~~~~~~~~ 157 (557)
..|..++......++. . ||.+..|-. .+++- .-..-...|..++......++. . ||.|..|-....-.+..-.
T Consensus 63 ~~i~~ia~G~~hs~~l-~-~G~v~~wG~n~~Gqlg-~P~~~~~~v~~ia~G~~hs~al-~-~G~v~~wG~n~~gqlg~~~ 137 (282)
T 3qhy_B 63 SGVDAIAAGNYHSLAL-K-DGEVIAWGGNEDGQTT-VPAEARSGVDAIAAGAWASYAL-K-DGKVIAWGDDSDGQTTVPA 137 (282)
T ss_dssp SCCCEEEECSSEEEEE-E-TTEEEEEECCTTSTTC-CCGGGSSSEEEEEEETTEEEEE-E-TTEEEEEECCTTSTTSCCG
T ss_pred CCEEEEEeCCCEEEEE-E-CCEEEEeeCCCCCCCC-CCcccCCCeEEEECcCCEEEEE-e-CCeEEEecCCCCCcCCCCc
Confidence 3566777665555555 4 899999962 22210 0011124677777665544443 3 8999999754321111111
Q ss_pred CCCCcEEEEEEcCCEEEEEeCCCeEEEEECCCCceEee---CCccEEEEEEcCCCcEEEEEcCCcEEEEecCCCCcchhH
Q psy7057 158 GHPNFIYSVAAHGDLITSGGEDQCVCVYQNKAQNSFMI---PAMSVWAVAILPNSDIVTGSSDGIVRVFSANPDRQAEDA 234 (557)
Q Consensus 158 ~h~~~V~~l~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~---~~~~v~~v~~~p~g~l~sg~~Dg~I~iwd~~~~~~~~~~ 234 (557)
.....|..++......+.-. ||.|+.|-......+.. ....|..++.-....++. .||.|+.|-.+..-+....
T Consensus 138 ~~~~~i~~i~~G~~~~~~l~-~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~G~~hs~al--~~G~v~~wG~n~~gqlg~p 214 (282)
T 3qhy_B 138 EAQSGVTALDGGVYTALAVK-NGGVIAWGDNYFGQTTVPAEAQSGVDDVAGGIFHSLAL--KDGKVIAWGDNRYKQTTVP 214 (282)
T ss_dssp GGGSSEEEEEECSSEEEEEE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSSEEEEE--ETTEEEEEECCTTSTTCCC
T ss_pred cCCCCeEEEEcccCEEEEEE-CCEEEEecCCCCCCCCCceecCCCeEEEEecCCEEEEE--ECCeEEEEECCCCCCCCCC
Confidence 12346778877444433344 79999997543311111 123577776655444555 6999999987654333211
Q ss_pred HHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecCCC
Q psy7057 235 VQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPD 273 (557)
Q Consensus 235 ~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~~ 273 (557)
. .....+..+..... ..++.. ||.|..|-.+..
T Consensus 215 ~--~~~~~v~~i~~G~~---h~~al~-~g~v~~wG~n~~ 247 (282)
T 3qhy_B 215 T--EALSGVSAIASGEW---YSLALK-NGKVIAWGSSRT 247 (282)
T ss_dssp G--GGGSSCCEEEECSS---CEEEEE-TTEEEEESTTCC
T ss_pred c--ccCCCceEEEcCCC---EEEEEE-CCEEEEecCCCC
Confidence 1 11123444443322 223444 999999986653
No 334
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=86.82 E-value=25 Score=34.61 Aligned_cols=73 Identities=12% Similarity=0.124 Sum_probs=48.7
Q ss_pred cCCcEEEEEEcCCCEEEEEECCCeEEEEeCCCc-EEEEEe---CCCCCEEEEEEeCC----CeEEEEEC----C----Ce
Q psy7057 78 HEMAVWGVIQLANGIIVTGCADKTIKLHSEEGE-FLKTLT---GHTDCVRGLAVLND----TDFVSCSN----D----AS 141 (557)
Q Consensus 78 h~~~V~~l~~~~~~~l~sgs~dg~I~vwd~~~~-~~~~l~---~h~~~V~~l~~~~~----~~lvs~s~----D----g~ 141 (557)
.-...+.++|.|++.|+.+..++.|++++.++. .+..+. ........|+++|+ +.|..+.. + ..
T Consensus 27 ~l~~P~~ia~~pdG~l~V~e~~g~I~~~d~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~ 106 (354)
T 3a9g_A 27 DLEVPWSIAPLGGGRYLVTERPGRLVLISPSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNR 106 (354)
T ss_dssp SCSCEEEEEEEETTEEEEEETTTEEEEECSSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEE
T ss_pred CCCCCeEEEEcCCCeEEEEeCCCEEEEEeCCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceE
Confidence 345678999999997777788899999986665 222211 12356899999997 55543332 3 56
Q ss_pred EEEEECCCC
Q psy7057 142 IRVWDSTTG 150 (557)
Q Consensus 142 I~vwd~~~~ 150 (557)
|..|+....
T Consensus 107 v~r~~~~~~ 115 (354)
T 3a9g_A 107 VIRGRLDGS 115 (354)
T ss_dssp EEEEEECSS
T ss_pred EEEEEECCC
Confidence 777776543
No 335
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=86.73 E-value=18 Score=37.27 Aligned_cols=29 Identities=21% Similarity=0.173 Sum_probs=23.0
Q ss_pred ccEEEEEEcCCCcEEEEECCC-cEEEEcCC
Q psy7057 13 MDVRSLSVTPDGCILSASRDK-SAKLWKPN 41 (557)
Q Consensus 13 ~~V~~l~~spdg~l~sgs~Dg-~V~iWd~~ 41 (557)
..-++|+|.|+|+|+.+...+ .|++++..
T Consensus 27 ~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~ 56 (454)
T 1cru_A 27 NKPHALLWGPDNQIWLTERATGKILRVNPE 56 (454)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTT
T ss_pred CCceEEEEcCCCcEEEEEcCCCEEEEEECC
Confidence 456799999999988888775 68888653
No 336
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=85.81 E-value=22 Score=36.30 Aligned_cols=88 Identities=24% Similarity=0.259 Sum_probs=55.9
Q ss_pred CCeEEEEECCCCeEEEEEeCC----CCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC---------------ceEee--
Q psy7057 139 DASIRVWDSTTGKCVHTMYGH----PNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ---------------NSFMI-- 195 (557)
Q Consensus 139 Dg~I~vwd~~~~~~~~~~~~h----~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~---------------~~~~~-- 195 (557)
++.||.-++.....-+.+... -..|..+.. +|++|+..+ +..|.|-.+... +.+..
T Consensus 40 ~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~ 118 (452)
T 3pbp_A 40 DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDE 118 (452)
T ss_dssp TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGG
T ss_pred CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEec-CCeEEEEEecCccccCcccccccccceeEEEcCC
Confidence 366777676543333333322 124556666 666666664 457777764411 01221
Q ss_pred ----CCccEEEEEEcCCCc----EEEEEcCCcEEEEecCC
Q psy7057 196 ----PAMSVWAVAILPNSD----IVTGSSDGIVRVFSANP 227 (557)
Q Consensus 196 ----~~~~v~~v~~~p~g~----l~sg~~Dg~I~iwd~~~ 227 (557)
+..+|..+.|+|-+. |++-.+|+.||+||+..
T Consensus 119 ~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~ 158 (452)
T 3pbp_A 119 EEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILN 158 (452)
T ss_dssp CC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTC
T ss_pred cccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEccc
Confidence 246799999999764 99999999999999986
No 337
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=85.54 E-value=26 Score=33.46 Aligned_cols=173 Identities=12% Similarity=0.129 Sum_probs=82.5
Q ss_pred EEEEECCCeEEEEECCCCeEEE-EEccc-CCcEEEEEEcCCCEEEEEEC-----C------CeEEEEeCCCcEEEEEeCC
Q psy7057 52 LLSASWDMTAKLWCLESQQCKL-TIRQH-EMAVWGVIQLANGIIVTGCA-----D------KTIKLHSEEGEFLKTLTGH 118 (557)
Q Consensus 52 l~sgs~Dg~i~iwd~~~~~~~~-~l~~h-~~~V~~l~~~~~~~l~sgs~-----d------g~I~vwd~~~~~~~~l~~h 118 (557)
++.|+ ..+.+||+.+.+-.. .+... ...-.+++...+.+++.|+. . ..+.+||.....-..+..-
T Consensus 8 ~~~GG--~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~ 85 (315)
T 4asc_A 8 FMISE--EGAVAYDPAANECYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPL 85 (315)
T ss_dssp EEEET--TEEEEEETTTTEEEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCB
T ss_pred EEEcC--CceEEECCCCCeEecCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCC
Confidence 34444 568889988876332 22211 22223333333446777773 1 1256677544333332211
Q ss_pred CCC--EEEEEEeCCCe-EEEEECC--------CeEEEEECCCCeEEE--EEeCCCCcEEEEEEcCCEEEEEeC-C-----
Q psy7057 119 TDC--VRGLAVLNDTD-FVSCSND--------ASIRVWDSTTGKCVH--TMYGHPNFIYSVAAHGDLITSGGE-D----- 179 (557)
Q Consensus 119 ~~~--V~~l~~~~~~~-lvs~s~D--------g~I~vwd~~~~~~~~--~~~~h~~~V~~l~~~~~~l~s~s~-D----- 179 (557)
..+ -.+++.. ++. ++.|+.+ ..+.+||+.+.+-.. .+......-.++..++..++.|+. +
T Consensus 86 p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~ 164 (315)
T 4asc_A 86 PSPRCLFGLGEA-LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLSHMDLVYVIGGKGSDRKCL 164 (315)
T ss_dssp SSCEESCEEEEE-TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCTTSCBC
T ss_pred CcchhceeEEEE-CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEEECCEEEEEeCCCCCCccc
Confidence 111 1122223 445 4555532 458889987764322 111111222233346666777765 2
Q ss_pred CeEEEEECCCC--ceEeeCC-ccE-EEEEEcCCCc-EEEEEcCC-----cEEEEecCCC
Q psy7057 180 QCVCVYQNKAQ--NSFMIPA-MSV-WAVAILPNSD-IVTGSSDG-----IVRVFSANPD 228 (557)
Q Consensus 180 g~I~iwd~~~~--~~~~~~~-~~v-~~v~~~p~g~-l~sg~~Dg-----~I~iwd~~~~ 228 (557)
..+.+||..+. ..+.... ... .+++.. +++ ++.|+.++ .+.+||..+.
T Consensus 165 ~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~ 222 (315)
T 4asc_A 165 NKMCVYDPKKFEWKELAPMQTARSLFGATVH-DGRIIVAAGVTDTGLTSSAEVYSITDN 222 (315)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TTEEEEEEEECSSSEEEEEEEEETTTT
T ss_pred ceEEEEeCCCCeEEECCCCCCchhceEEEEE-CCEEEEEeccCCCCccceEEEEECCCC
Confidence 46888987655 2222111 111 122222 556 66777654 4778887665
No 338
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=85.47 E-value=22 Score=41.99 Aligned_cols=210 Identities=12% Similarity=0.192 Sum_probs=120.5
Q ss_pred EcCCCcEEEEECCCcEEEEcCCC---------------CCCCCCCCEEEEEECCCeEEEEECCC-CeEEEEEccc----C
Q psy7057 20 VTPDGCILSASRDKSAKLWKPND---------------LSPGAKVNTLLSASWDMTAKLWCLES-QQCKLTIRQH----E 79 (557)
Q Consensus 20 ~spdg~l~sgs~Dg~V~iWd~~~---------------~~~~~~~~~l~sgs~Dg~i~iwd~~~-~~~~~~l~~h----~ 79 (557)
.+|..++++--...++.|+|+.+ +.|- +.+.|+.. .+..|.-|++.. ..+...+..| .
T Consensus 73 MnP~~~iiALrag~~lQiFnl~~k~klks~~~~e~VvfWkWi-s~~~l~lV-T~~aVyHW~~~~~s~P~k~fdR~~~L~~ 150 (1630)
T 1xi4_A 73 MNPASKVIALKAGKTLQIFNIEMKSKMKAHTMTDDVTFWKWI-SLNTVALV-TDNAVYHWSMEGESQPVKMFDRHSSLAG 150 (1630)
T ss_pred cCCCcceEEEecCCeEEEeehHHhhhhcccccCCCceEEEec-CCCeeEEE-cCCeEEEeccCCCCccHHHHhcchhccc
Confidence 34555555555578889998865 2222 12333333 256799999864 2444444444 4
Q ss_pred CcEEEEEEcCCC--EEEEEE------CCCeEEEEeCCCcEEEEEeCCCCCEEEEEEeCC---CeEEE-EE---CCCeEEE
Q psy7057 80 MAVWGVIQLANG--IIVTGC------ADKTIKLHSEEGEFLKTLTGHTDCVRGLAVLND---TDFVS-CS---NDASIRV 144 (557)
Q Consensus 80 ~~V~~l~~~~~~--~l~sgs------~dg~I~vwd~~~~~~~~l~~h~~~V~~l~~~~~---~~lvs-~s---~Dg~I~v 144 (557)
..|..-..+++. .+++|- -.|.+.+|+.+.+..+.+.||......+..... ..+++ +. ..+.++|
T Consensus 151 ~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi 230 (1630)
T 1xi4_A 151 CQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHI 230 (1630)
T ss_pred CeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccccchhhhHhHhhhheeccCCCCCCceEEEEEEecCCCceEEE
Confidence 456666667766 444443 357888998777777788888776655554322 22332 21 2368888
Q ss_pred EECCCC---e------EEEEEeCC---CCcEEEEEEcC--CEEEEEeCCCeEEEEECCCCceE---eeCCccEEEEEEcC
Q psy7057 145 WDSTTG---K------CVHTMYGH---PNFIYSVAAHG--DLITSGGEDQCVCVYQNKAQNSF---MIPAMSVWAVAILP 207 (557)
Q Consensus 145 wd~~~~---~------~~~~~~~h---~~~V~~l~~~~--~~l~s~s~Dg~I~iwd~~~~~~~---~~~~~~v~~v~~~p 207 (557)
-++... . .+..+... .+...++..+. ..+...+.-|.|.+||+.+...+ +....+|...+..+
T Consensus 231 ~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~~ris~~~iF~~~~~~ 310 (1630)
T 1xi4_A 231 IEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHE 310 (1630)
T ss_pred EecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCceEEEEecccchhhhhccccCCceEEeccCC
Confidence 887432 1 11111111 23334555533 36778888999999998776222 22334454444443
Q ss_pred C-CcEEEEEcCCcEEEEecCCCCcc
Q psy7057 208 N-SDIVTGSSDGIVRVFSANPDRQA 231 (557)
Q Consensus 208 ~-g~l~sg~~Dg~I~iwd~~~~~~~ 231 (557)
. +.++.....|.|.--.++.....
T Consensus 311 ~~~g~~~vnr~G~vl~v~v~~~~iv 335 (1630)
T 1xi4_A 311 ATAGIIGVNRKGQVLSVCVEEENII 335 (1630)
T ss_pred CCCceEEEcCCceEEEEEEccchhh
Confidence 3 33777778888777777765544
No 339
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=85.41 E-value=26 Score=33.36 Aligned_cols=98 Identities=13% Similarity=0.166 Sum_probs=50.0
Q ss_pred CCe-EEEEECC-----CeEEEEECCCCeEEEE--EeCCCCcEEEEEEcCCEEEEEeCC-----CeEEEEECCCC--ceEe
Q psy7057 130 DTD-FVSCSND-----ASIRVWDSTTGKCVHT--MYGHPNFIYSVAAHGDLITSGGED-----QCVCVYQNKAQ--NSFM 194 (557)
Q Consensus 130 ~~~-lvs~s~D-----g~I~vwd~~~~~~~~~--~~~h~~~V~~l~~~~~~l~s~s~D-----g~I~iwd~~~~--~~~~ 194 (557)
++. ++.|+.+ ..+.+||+.+.+-... +......-.++.+++.+++.|+.+ ..+.+||..+. ..+.
T Consensus 121 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~ 200 (308)
T 1zgk_A 121 DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVLNRLLYAVGGFDGTNRLNSAECYYPERNEWRMIT 200 (308)
T ss_dssp TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEECC
T ss_pred CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEECCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCC
Confidence 445 4455433 4588899877643221 111111222333466667777654 45888887655 2221
Q ss_pred e---CCccEEEEEEcCCCc-EEEEEcC-----CcEEEEecCCCC
Q psy7057 195 I---PAMSVWAVAILPNSD-IVTGSSD-----GIVRVFSANPDR 229 (557)
Q Consensus 195 ~---~~~~v~~v~~~p~g~-l~sg~~D-----g~I~iwd~~~~~ 229 (557)
. ..... +++.. ++. ++.|+.+ ..+.+||..+..
T Consensus 201 ~~p~~r~~~-~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~ 242 (308)
T 1zgk_A 201 AMNTIRSGA-GVCVL-HNCIYAAGGYDGQDQLNSVERYDVETET 242 (308)
T ss_dssp CCSSCCBSC-EEEEE-TTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred CCCCccccc-eEEEE-CCEEEEEeCCCCCCccceEEEEeCCCCc
Confidence 1 11111 22222 555 5666654 558888887653
No 340
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=85.11 E-value=6.3 Score=36.46 Aligned_cols=98 Identities=7% Similarity=-0.088 Sum_probs=59.7
Q ss_pred CCEEEEEEeCCCeEEEEECCCeEEEEECCCCeE------EEEEe--CCCCcEEEEEEcC--CEEEEEeCCCeEEEEECCC
Q psy7057 120 DCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKC------VHTMY--GHPNFIYSVAAHG--DLITSGGEDQCVCVYQNKA 189 (557)
Q Consensus 120 ~~V~~l~~~~~~~lvs~s~Dg~I~vwd~~~~~~------~~~~~--~h~~~V~~l~~~~--~~l~s~s~Dg~I~iwd~~~ 189 (557)
..+..++++|++.|.+. .+|.+.-.+..+... -..+- +-.. ..++.+++ .+.++ .||.|+-++..+
T Consensus 41 ~~~~~laf~P~G~LYaV-~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~-F~a~~fD~~G~LYav--~dG~iyr~~pP~ 116 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV-LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQ-FQFLFFDPNGYLYAV--SKDKLYKASPPQ 116 (236)
T ss_dssp TTCSEEEECTTSCEEEE-ETTEEEEESCCCSTTCCHHHHCEEEECSCGGG-CSEEEECTTSCEEEE--ETTEEEEESCCC
T ss_pred ccceeEEECCCccEEEE-eCCeEEEECCCCCCcccccccccEeccccccc-ceEEEECCCCCEEEe--CCCEEEEeCCCc
Confidence 46779999999987766 777777766544111 11111 1111 35667744 44444 669998887422
Q ss_pred C--c------eEee--CCccEEEEEEcCCCcEEEEEcCCcEEE
Q psy7057 190 Q--N------SFMI--PAMSVWAVAILPNSDIVTGSSDGIVRV 222 (557)
Q Consensus 190 ~--~------~~~~--~~~~v~~v~~~p~g~l~sg~~Dg~I~i 222 (557)
. . ...+ --..+..|.+.|+|.|.+.. |+.++-
T Consensus 117 ~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~-dg~lyr 158 (236)
T 1tl2_A 117 SDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH-GQQFYK 158 (236)
T ss_dssp STTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE-TTEEEE
T ss_pred CCCCceeccccEeccCCCCceEEEEECCCceEEEEe-CCcEEe
Confidence 1 1 1111 11467999999999977777 888544
No 341
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=84.19 E-value=5.7 Score=39.29 Aligned_cols=104 Identities=6% Similarity=0.069 Sum_probs=66.6
Q ss_pred CCEEEEEECCCeEEEEe-CCCcEEEEEeCC-CCCEEEEEEe---CCCeEEEE--ECCCeEEEEECCCCeEEEEEeC----
Q psy7057 90 NGIIVTGCADKTIKLHS-EEGEFLKTLTGH-TDCVRGLAVL---NDTDFVSC--SNDASIRVWDSTTGKCVHTMYG---- 158 (557)
Q Consensus 90 ~~~l~sgs~dg~I~vwd-~~~~~~~~l~~h-~~~V~~l~~~---~~~~lvs~--s~Dg~I~vwd~~~~~~~~~~~~---- 158 (557)
++.++.++.||.|.-.| .+|+.+.++... ..++....-. .++.++.+ +.||.|..++..+|.....+..
T Consensus 10 ~~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv 89 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLV 89 (339)
T ss_dssp EEEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHH
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccce
Confidence 35789999999999999 678888887653 1222221100 12344443 6899999999888865544431
Q ss_pred CCCcEEE---EEE-------cCCEEEEEeCCCeEEEEECCCCceE
Q psy7057 159 HPNFIYS---VAA-------HGDLITSGGEDQCVCVYQNKAQNSF 193 (557)
Q Consensus 159 h~~~V~~---l~~-------~~~~l~s~s~Dg~I~iwd~~~~~~~ 193 (557)
...++.. ... .+..+++|+.++.+...|..+.+.+
T Consensus 90 ~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~ 134 (339)
T 2be1_A 90 STSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEII 134 (339)
T ss_dssp TTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEE
T ss_pred eccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEE
Confidence 1222321 001 4557889999999999998877444
No 342
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=79.26 E-value=50 Score=32.36 Aligned_cols=51 Identities=8% Similarity=0.122 Sum_probs=36.5
Q ss_pred CcEEEEEEcCCCE-EEEEECCCeEEEEeCCCcEEEEEe-------CCCCCEEEEEEeCC
Q psy7057 80 MAVWGVIQLANGI-IVTGCADKTIKLHSEEGEFLKTLT-------GHTDCVRGLAVLND 130 (557)
Q Consensus 80 ~~V~~l~~~~~~~-l~sgs~dg~I~vwd~~~~~~~~l~-------~h~~~V~~l~~~~~ 130 (557)
...+.|+|.|++. ++.+...+.|++++..+.....+. ........|+++|+
T Consensus 18 ~~P~~i~~~pdG~~l~V~e~~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pd 76 (353)
T 2g8s_A 18 DHPWALAFLPDNHGMLITLRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPD 76 (353)
T ss_dssp SSEEEEEECSTTCCEEEEETTTEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTT
T ss_pred CCcEEEEEcCCCCEEEEEeCCceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCC
Confidence 4567999999997 888889999999986554321111 12345789999995
No 343
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=78.88 E-value=8 Score=37.93 Aligned_cols=53 Identities=6% Similarity=0.027 Sum_probs=25.0
Q ss_pred eEEEEECCCC--ceEeeCC-ccEEEEEEcCCCc-EEEEEcCC------cEEEEecCCCCcchh
Q psy7057 181 CVCVYQNKAQ--NSFMIPA-MSVWAVAILPNSD-IVTGSSDG------IVRVFSANPDRQAED 233 (557)
Q Consensus 181 ~I~iwd~~~~--~~~~~~~-~~v~~v~~~p~g~-l~sg~~Dg------~I~iwd~~~~~~~~~ 233 (557)
.+.+||+.+. ..+.... ......++..+++ ++.||.++ .|.++++++.+....
T Consensus 286 ~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~l~~~~~~~~~~ 348 (357)
T 2uvk_A 286 STDIHLWHNGKWDKSGELSQGRAYGVSLPWNNSLLIIGGETAGGKAVTDSVLITVKDNKVTVQ 348 (357)
T ss_dssp CCEEEECC---CEEEEECSSCCBSSEEEEETTEEEEEEEECGGGCEEEEEEEEEC-CCSCEEE
T ss_pred eEEEEecCCCceeeCCCCCCCcccceeEEeCCEEEEEeeeCCCCCEeeeEEEEEEcCcEeEee
Confidence 4678887654 3332211 1111222333566 66777543 355567777665533
No 344
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=78.14 E-value=19 Score=34.38 Aligned_cols=129 Identities=15% Similarity=0.107 Sum_probs=61.0
Q ss_pred CeEEEEECCCCeEEEE--EcccCCcEEEEEEcCCCEEEEEECC-----CeEEEEeCCCcEEEEEeC---CCCCEEEEEEe
Q psy7057 59 MTAKLWCLESQQCKLT--IRQHEMAVWGVIQLANGIIVTGCAD-----KTIKLHSEEGEFLKTLTG---HTDCVRGLAVL 128 (557)
Q Consensus 59 g~i~iwd~~~~~~~~~--l~~h~~~V~~l~~~~~~~l~sgs~d-----g~I~vwd~~~~~~~~l~~---h~~~V~~l~~~ 128 (557)
..+.+||+.+.+-... +........ ++...+.+++.|+.+ ..+.+||.....-..+.. ....- +++..
T Consensus 90 ~~~~~~d~~~~~W~~~~~~p~~r~~~~-~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~-~~~~~ 167 (308)
T 1zgk_A 90 SALDCYNPMTNQWSPCAPMSVPRNRIG-VGVIDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGV-GVAVL 167 (308)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBTCE-EEEETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSC-EEEEE
T ss_pred ceEEEECCCCCeEeECCCCCcCccccE-EEEECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccce-EEEEE
Confidence 3577788776542211 111111112 222223355665533 356777754433222221 11111 22223
Q ss_pred CCCe-EEEEECC-----CeEEEEECCCCeEEEE--EeCCCCcEEEEEEcCCEEEEEeCC-----CeEEEEECCCC
Q psy7057 129 NDTD-FVSCSND-----ASIRVWDSTTGKCVHT--MYGHPNFIYSVAAHGDLITSGGED-----QCVCVYQNKAQ 190 (557)
Q Consensus 129 ~~~~-lvs~s~D-----g~I~vwd~~~~~~~~~--~~~h~~~V~~l~~~~~~l~s~s~D-----g~I~iwd~~~~ 190 (557)
++. ++.|+.+ ..+.+||+.+.+-... +......-.++.+++.+++.|+.+ ..+.+||+.+.
T Consensus 168 -~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~ 241 (308)
T 1zgk_A 168 -NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETE 241 (308)
T ss_dssp -TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTT
T ss_pred -CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEECCEEEEEeCCCCCCccceEEEEeCCCC
Confidence 445 5566544 4588899876643221 111111222333466677777654 46889997665
No 345
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=76.72 E-value=52 Score=31.16 Aligned_cols=204 Identities=12% Similarity=0.023 Sum_probs=106.3
Q ss_pred cEEEEEEcCCCcEEEEECCCcEEEEcCCC----------------CCCCCCCCEEEEEECCCeEEEEECCCCeEEEEEcc
Q psy7057 14 DVRSLSVTPDGCILSASRDKSAKLWKPND----------------LSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQ 77 (557)
Q Consensus 14 ~V~~l~~spdg~l~sgs~Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~ 77 (557)
.|..|+....-.++. . ||.|..|-... ++.. ....++. . ||.|..|-....-.+-.-..
T Consensus 25 ~i~~ia~G~~h~~~l-~-~G~v~~wG~n~~Gqlg~p~~~~~~i~~ia~G-~~hs~~l-~-~G~v~~wG~n~~Gqlg~P~~ 99 (282)
T 3qhy_B 25 GVDAIAGGYFHGLAL-K-GGKVLGWGANLNGQLTMPAATQSGVDAIAAG-NYHSLAL-K-DGEVIAWGGNEDGQTTVPAE 99 (282)
T ss_dssp SCCEEEECSSEEEEE-E-TTEEEEEECCSSSTTSCCGGGGSCCCEEEEC-SSEEEEE-E-TTEEEEEECCTTSTTCCCGG
T ss_pred CCcEEEeCCCeEEEE-E-CCEEEEEeCCCCCCCCCCccCCCCEEEEEeC-CCEEEEE-E-CCEEEEeeCCCCCCCCCCcc
Confidence 566666554333444 4 89999997654 1111 1112222 4 78888886543211100011
Q ss_pred cCCcEEEEEEcCCCEEEEEECCCeEEEEeC--CCcEEEEEeCCCCCEEEEEEeCCCeEEEEECCCeEEEEECCCCeEEEE
Q psy7057 78 HEMAVWGVIQLANGIIVTGCADKTIKLHSE--EGEFLKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHT 155 (557)
Q Consensus 78 h~~~V~~l~~~~~~~l~sgs~dg~I~vwd~--~~~~~~~l~~h~~~V~~l~~~~~~~lvs~s~Dg~I~vwd~~~~~~~~~ 155 (557)
-...|..++......++.. ||.+..|-. .+++- ........|..++......++. . |+.|..|-....-.+..
T Consensus 100 ~~~~v~~ia~G~~hs~al~--~G~v~~wG~n~~gqlg-~~~~~~~~i~~i~~G~~~~~~l-~-~G~v~~wG~n~~gqlg~ 174 (282)
T 3qhy_B 100 ARSGVDAIAAGAWASYALK--DGKVIAWGDDSDGQTT-VPAEAQSGVTALDGGVYTALAV-K-NGGVIAWGDNYFGQTTV 174 (282)
T ss_dssp GSSSEEEEEEETTEEEEEE--TTEEEEEECCTTSTTS-CCGGGGSSEEEEEECSSEEEEE-E-TTEEEEEECCTTSTTSC
T ss_pred cCCCeEEEECcCCEEEEEe--CCeEEEecCCCCCcCC-CCccCCCCeEEEEcccCEEEEE-E-CCEEEEecCCCCCCCCC
Confidence 1346777877665544443 999999962 22211 1111234577766544433433 3 78999997543211111
Q ss_pred EeCCCCcEEEEEEcCCEEEEEeCCCeEEEEECCCCceEee---CCccEEEEEEcCCCcEEEEEcCCcEEEEecCCCCc
Q psy7057 156 MYGHPNFIYSVAAHGDLITSGGEDQCVCVYQNKAQNSFMI---PAMSVWAVAILPNSDIVTGSSDGIVRVFSANPDRQ 230 (557)
Q Consensus 156 ~~~h~~~V~~l~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~---~~~~v~~v~~~p~g~l~sg~~Dg~I~iwd~~~~~~ 230 (557)
-..-...|..|+.-....+.- .||.|+.|-......+-. ....|..++.-....++.. ||.|+.|-.+...+
T Consensus 175 p~~~~~~v~~i~~G~~hs~al-~~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~G~~h~~al~--~g~v~~wG~n~~gq 249 (282)
T 3qhy_B 175 PAEAQSGVDDVAGGIFHSLAL-KDGKVIAWGDNRYKQTTVPTEALSGVSAIASGEWYSLALK--NGKVIAWGSSRTAP 249 (282)
T ss_dssp CGGGGSSEEEEEECSSEEEEE-ETTEEEEEECCTTSTTCCCGGGGSSCCEEEECSSCEEEEE--TTEEEEESTTCCCC
T ss_pred ceecCCCeEEEEecCCEEEEE-ECCeEEEEECCCCCCCCCCcccCCCceEEEcCCCEEEEEE--CCEEEEecCCCCcc
Confidence 011135678888744433333 699999997443311111 1124666665544434444 99999997765443
No 346
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=74.84 E-value=59 Score=30.88 Aligned_cols=128 Identities=10% Similarity=0.089 Sum_probs=59.0
Q ss_pred EEEEECCCCeEEEE--EcccCCcEEEEEEcCCCEEEEEECC-------CeEEEEeCCCcEEEEEeCCCCCE--EEEEEeC
Q psy7057 61 AKLWCLESQQCKLT--IRQHEMAVWGVIQLANGIIVTGCAD-------KTIKLHSEEGEFLKTLTGHTDCV--RGLAVLN 129 (557)
Q Consensus 61 i~iwd~~~~~~~~~--l~~h~~~V~~l~~~~~~~l~sgs~d-------g~I~vwd~~~~~~~~l~~h~~~V--~~l~~~~ 129 (557)
+.+||+.+.+-... +...... .+++...+.+++.|+.+ ..+.++|.....-..+.....+. .+++..
T Consensus 80 ~~~~d~~~~~W~~~~~~p~~r~~-~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~- 157 (318)
T 2woz_A 80 FFQLDNVSSEWVGLPPLPSARCL-FGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVISH- 157 (318)
T ss_dssp EEEEETTTTEEEECSCBSSCBCS-CEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEEE-
T ss_pred EEEEeCCCCcEEECCCCCccccc-cceEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEEE-
Confidence 66778776543221 1111111 12222233366666653 24667775443333322111111 122222
Q ss_pred CCe-EEEEEC------CCeEEEEECCCCeEEEE--EeCCCCcEEEEEEcCCEEEEEeCC-----CeEEEEECCCC
Q psy7057 130 DTD-FVSCSN------DASIRVWDSTTGKCVHT--MYGHPNFIYSVAAHGDLITSGGED-----QCVCVYQNKAQ 190 (557)
Q Consensus 130 ~~~-lvs~s~------Dg~I~vwd~~~~~~~~~--~~~h~~~V~~l~~~~~~l~s~s~D-----g~I~iwd~~~~ 190 (557)
++. ++.|+. -..+.+||+.+.+-... +........++..++.+++.|+.+ ..+.+||..+.
T Consensus 158 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~ 232 (318)
T 2woz_A 158 NGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIHKGKIVIAGGVTEDGLSASVEAFDLKTN 232 (318)
T ss_dssp TTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEEEEEETTEEEEEEEEEETTTC
T ss_pred CCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEEECCEEEEEcCcCCCCccceEEEEECCCC
Confidence 455 445543 23588999887653322 111111223334477777777643 34678887655
No 347
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=71.57 E-value=81 Score=31.06 Aligned_cols=172 Identities=10% Similarity=0.023 Sum_probs=84.0
Q ss_pred CCEEEEEECCCeEEEEECCC-C---eEEEEEcccCCcEEEEEEcC--CCEEEEEECCC----eEEEEeCCCcEEEEEe--
Q psy7057 49 VNTLLSASWDMTAKLWCLES-Q---QCKLTIRQHEMAVWGVIQLA--NGIIVTGCADK----TIKLHSEEGEFLKTLT-- 116 (557)
Q Consensus 49 ~~~l~sgs~Dg~i~iwd~~~-~---~~~~~l~~h~~~V~~l~~~~--~~~l~sgs~dg----~I~vwd~~~~~~~~l~-- 116 (557)
...|..|+..| +.+++... + +..... .....|.+|++.| .+.+..++..+ .|...+..+..-..+.
T Consensus 22 ~g~l~vgt~~G-l~~~~~~~~g~~W~~~~~~-~~~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~D~G~tW~~~~~~ 99 (394)
T 3b7f_A 22 PVMLLVATIKG-AWFLASDPARRTWELRGPV-FLGHTIHHIVQDPREPERMLMAARTGHLGPTVFRSDDGGGNWTEATRP 99 (394)
T ss_dssp CCEEEEEETTE-EEEEEECTTSCSEEEEEEE-STTSEEEEEEECSSSTTCEEEEEEC--CCEEEEEESSTTSCCEECSBC
T ss_pred CCEEEEEecCc-eEEEECCCCCCCceECCcc-CCCCceEEEEECCCCCCeEEEEecCCCCCccEEEeCCCCCCceECCcc
Confidence 34566666665 33343322 2 222111 2346799999998 55555555555 4544432232211111
Q ss_pred ----C--------CCCCEEEEEEeC---CCeEEEEECCCeEEEEECCCCeEEEEEe---C----------------CCCc
Q psy7057 117 ----G--------HTDCVRGLAVLN---DTDFVSCSNDASIRVWDSTTGKCVHTMY---G----------------HPNF 162 (557)
Q Consensus 117 ----~--------h~~~V~~l~~~~---~~~lvs~s~Dg~I~vwd~~~~~~~~~~~---~----------------h~~~ 162 (557)
. +...|.+|++.| .+.+..++..+.|...+ ..++.-..+. . ....
T Consensus 100 ~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~ggl~~S~-DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~ 178 (394)
T 3b7f_A 100 PAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSPQGLFRST-DHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPK 178 (394)
T ss_dssp CCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEETTEEEEES-STTSBCEECHHHHTCTTHHHHHCCC----CCCCE
T ss_pred ccCCCcccccccccccceeEEEeCCCCCCCEEEEEecCCcEEEEc-CCCCCeEECcCccCCccccccccccccCCCCCCc
Confidence 0 112578888886 45566666666665553 2222211111 1 1235
Q ss_pred EEEEEEc---CCEEEEEeCCCeEEEEEC-CCC-ceEee--C-----------CccEEEEEEcCC--CcEEEEEcCCcEEE
Q psy7057 163 IYSVAAH---GDLITSGGEDQCVCVYQN-KAQ-NSFMI--P-----------AMSVWAVAILPN--SDIVTGSSDGIVRV 222 (557)
Q Consensus 163 V~~l~~~---~~~l~s~s~Dg~I~iwd~-~~~-~~~~~--~-----------~~~v~~v~~~p~--g~l~sg~~Dg~I~i 222 (557)
+.+|.++ ...|+.+..++.|...+- ... +.+.. . ...+.++++.|. +.+.++...+ |..
T Consensus 179 i~~i~~d~~~~~~l~vg~~~ggl~~s~DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~g-l~~ 257 (394)
T 3b7f_A 179 MHSILVDPRDPKHLYIGMSSGGVFESTDAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCG-IYR 257 (394)
T ss_dssp EEEEEECTTCTTCEEEEEETBEEEEESSTTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTE-EEE
T ss_pred eeEEEECCCCCCEEEEEECCCCEEEECCCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCe-EEE
Confidence 7788884 345555554444444332 211 22211 0 134889999987 4466666544 444
Q ss_pred Ee
Q psy7057 223 FS 224 (557)
Q Consensus 223 wd 224 (557)
.+
T Consensus 258 s~ 259 (394)
T 3b7f_A 258 MD 259 (394)
T ss_dssp EE
T ss_pred eC
Confidence 43
No 348
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=68.99 E-value=79 Score=29.87 Aligned_cols=137 Identities=12% Similarity=0.022 Sum_probs=78.2
Q ss_pred CCCEEEEEECCCeEEEEECCCC------eEEEEEcccCCcEEEEEEcC-CCEEEEEECCCeEEEEeC----------CCc
Q psy7057 48 KVNTLLSASWDMTAKLWCLESQ------QCKLTIRQHEMAVWGVIQLA-NGIIVTGCADKTIKLHSE----------EGE 110 (557)
Q Consensus 48 ~~~~l~sgs~Dg~i~iwd~~~~------~~~~~l~~h~~~V~~l~~~~-~~~l~sgs~dg~I~vwd~----------~~~ 110 (557)
....++..+.+|.++...+..- .....+.. .+.+..+.... +..++..+..|.+..+.. .|.
T Consensus 79 ~~~~~v~~T~~G~iKr~~l~~~~~~~~G~~~i~lke-gD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv 157 (276)
T 3no0_A 79 FGNRLLLATKKGYVKKIPLAEFEYKAQGMPIIKLTE-GDEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGARGV 157 (276)
T ss_dssp SCSEEEEEETTSEEEEEEGGGTTTCSTTEECSCCCT-TCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCCCE
T ss_pred CCCEEEEEeCCCEEEEEEHHHhhhhcCCeEEEecCC-CCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCCCE
Confidence 3467888889998888876542 22223333 33444444443 337888888999887761 122
Q ss_pred EEEEEeCCCCCEEEEEEeCC-CeEEEEECCCeEEEEECCC-------CeEEEEEeCCCCcEEEEEE-c-CCEEEEEeCCC
Q psy7057 111 FLKTLTGHTDCVRGLAVLND-TDFVSCSNDASIRVWDSTT-------GKCVHTMYGHPNFIYSVAA-H-GDLITSGGEDQ 180 (557)
Q Consensus 111 ~~~~l~~h~~~V~~l~~~~~-~~lvs~s~Dg~I~vwd~~~-------~~~~~~~~~h~~~V~~l~~-~-~~~l~s~s~Dg 180 (557)
....+.. .+.|.++...++ ..++..+..|.++...+.. ++-+..+ ...+.+..+.. + .+.++..+.+|
T Consensus 158 ~~i~L~~-~d~vv~~~~~~~~~~ll~~T~~G~~kr~~~~e~~~~~R~gkGv~~i-~~~~~lv~~~~~~~~~~i~~~t~~G 235 (276)
T 3no0_A 158 QGIKLEK-NDETSGLRIWNGEPYLLVITAKGRVKKISHEEIPKTNRGVKGTEVS-GTKDTLVDLIPIKEEVELLITTKNG 235 (276)
T ss_dssp ECCCCCT-TCCEEEEEEESSCSEEEEEETTSCEEEEEGGGSCCCCTTCCCEECC-CSSSCEEEEEEESSEEEEEEEETTS
T ss_pred EEEccCC-CCEEEEEEEeCCCCEEEEEeCCCcEEEeEHHHcccCCCCCcceEEE-cCCCcEEEEEEeCCCCEEEEEcCCC
Confidence 2222332 355666554444 4588889999988887532 2223333 22344444433 3 33566677777
Q ss_pred eEEE--EEC
Q psy7057 181 CVCV--YQN 187 (557)
Q Consensus 181 ~I~i--wd~ 187 (557)
.+.. ++.
T Consensus 236 ~~ir~~~~~ 244 (276)
T 3no0_A 236 KAFYDKINQ 244 (276)
T ss_dssp CEEEEEEEG
T ss_pred eEEEeeeCH
Confidence 7766 763
No 349
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=66.70 E-value=88 Score=29.58 Aligned_cols=168 Identities=17% Similarity=0.253 Sum_probs=77.7
Q ss_pred eEEEEECCCCeEEE-EEcc-cCCcEEEEEEcCCCEEEEEEC----CC-------eEEEEeCCCcEEEEEeCC--CCCEEE
Q psy7057 60 TAKLWCLESQQCKL-TIRQ-HEMAVWGVIQLANGIIVTGCA----DK-------TIKLHSEEGEFLKTLTGH--TDCVRG 124 (557)
Q Consensus 60 ~i~iwd~~~~~~~~-~l~~-h~~~V~~l~~~~~~~l~sgs~----dg-------~I~vwd~~~~~~~~l~~h--~~~V~~ 124 (557)
.+..||+.+.+-.. .+.. ....-.+++...+.+++.|+. ++ .+.++|.....-..+..- ...-.+
T Consensus 25 ~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~ 104 (318)
T 2woz_A 25 AAVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLFG 104 (318)
T ss_dssp EEEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCSCE
T ss_pred ceEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccccc
Confidence 47888888776433 2221 122223333333337777763 11 166677544333332211 111122
Q ss_pred EEEeCCCe-EEEEECC-------CeEEEEECCCCeEEEE--EeCCCCcEEEEEEcCCEEEEEeC------CCeEEEEECC
Q psy7057 125 LAVLNDTD-FVSCSND-------ASIRVWDSTTGKCVHT--MYGHPNFIYSVAAHGDLITSGGE------DQCVCVYQNK 188 (557)
Q Consensus 125 l~~~~~~~-lvs~s~D-------g~I~vwd~~~~~~~~~--~~~h~~~V~~l~~~~~~l~s~s~------Dg~I~iwd~~ 188 (557)
++.. ++. ++.|+.+ ..+.++|+.+.+-... +......-.++..++.+++.|+. -..+.+||..
T Consensus 105 ~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~ 183 (318)
T 2woz_A 105 LGEV-DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVISHNGMIYCLGGKTDDKKCTNRVFIYNPK 183 (318)
T ss_dssp EEEE-TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEEETTEEEEECCEESSSCBCCCEEEEETT
T ss_pred eEEE-CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEEECCEEEEEcCCCCCCCccceEEEEcCC
Confidence 2333 344 5566653 3477888876653322 11110111222346666666653 2358889976
Q ss_pred CC--ceEeeCCcc--EEEEEEcCCCc-EEEEEcC-----CcEEEEecCCCC
Q psy7057 189 AQ--NSFMIPAMS--VWAVAILPNSD-IVTGSSD-----GIVRVFSANPDR 229 (557)
Q Consensus 189 ~~--~~~~~~~~~--v~~v~~~p~g~-l~sg~~D-----g~I~iwd~~~~~ 229 (557)
+. ..+.....+ -.+++.. ++. ++.|+.+ ..+.+||..+.+
T Consensus 184 ~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 233 (318)
T 2woz_A 184 KGDWKDLAPMKTPRSMFGVAIH-KGKIVIAGGVTEDGLSASVEAFDLKTNK 233 (318)
T ss_dssp TTEEEEECCCSSCCBSCEEEEE-TTEEEEEEEEETTEEEEEEEEEETTTCC
T ss_pred CCEEEECCCCCCCcccceEEEE-CCEEEEEcCcCCCCccceEEEEECCCCe
Confidence 65 333211111 1122222 456 5666643 346678876653
No 350
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=64.80 E-value=91 Score=30.00 Aligned_cols=48 Identities=13% Similarity=-0.030 Sum_probs=25.0
Q ss_pred CeEEEEECCCCeE--EEEEeCCCCc-EEEEEEcCCEEEEEeC------CCeEEEEEC
Q psy7057 140 ASIRVWDSTTGKC--VHTMYGHPNF-IYSVAAHGDLITSGGE------DQCVCVYQN 187 (557)
Q Consensus 140 g~I~vwd~~~~~~--~~~~~~h~~~-V~~l~~~~~~l~s~s~------Dg~I~iwd~ 187 (557)
..+.+||+.+.+- +..+...... ..++..++.+++.|+. ...+.+||+
T Consensus 168 ~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~ 224 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGESPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDF 224 (357)
T ss_dssp CEEEEEETTTTEEEEEEECSSCCCBSCEEEEETTEEEEECCEEETTEECCCEEEEEC
T ss_pred ccEEEEeCCCCcEEECCCCCCCCcccccEEEECCEEEEEeeecCCCcccCceEEEEe
Confidence 5788999877643 3322211111 2233336666666653 235667775
No 351
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=61.30 E-value=1.2e+02 Score=29.36 Aligned_cols=138 Identities=13% Similarity=0.001 Sum_probs=77.3
Q ss_pred CCCEEEEEECCCeEEEEECCC-------CeEEEEEcccCCcEEEEEEcCCCEEEEEECCCeEEEEeCC--C---------
Q psy7057 48 KVNTLLSASWDMTAKLWCLES-------QQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHSEE--G--------- 109 (557)
Q Consensus 48 ~~~~l~sgs~Dg~i~iwd~~~-------~~~~~~l~~h~~~V~~l~~~~~~~l~sgs~dg~I~vwd~~--~--------- 109 (557)
....++..+.+|.++.-.+.. +.....+.....-+.......+..|+..+..|.+..+... .
T Consensus 108 ~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke~D~lv~~~~~~~~d~ill~T~~G~~~rf~~~~~eip~~gr~a~ 187 (327)
T 3uc1_A 108 DAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRDNDELVGAVLCSAGDDLLLVSANGQSIRFSATDEALRPMGRATS 187 (327)
T ss_dssp SSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCTTCCEEEEEEECTTCEEEEEETTSEEEEEECCTTTSCCCCTTSB
T ss_pred CCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECCCCEEEEEEEecCCCEEEEEECCCeEEEEECcccccCcCCcCCC
Confidence 456889999999998887644 2222334443333433344444477778888888777533 1
Q ss_pred -cEEEEEeCCCCCEEEEEEeCC-CeEEEEECCCeEEEEECCCC-------eEEEEE--eCCCCcEEEEEE--cCCEEEEE
Q psy7057 110 -EFLKTLTGHTDCVRGLAVLND-TDFVSCSNDASIRVWDSTTG-------KCVHTM--YGHPNFIYSVAA--HGDLITSG 176 (557)
Q Consensus 110 -~~~~~l~~h~~~V~~l~~~~~-~~lvs~s~Dg~I~vwd~~~~-------~~~~~~--~~h~~~V~~l~~--~~~~l~s~ 176 (557)
.....+. ..+.|.++...++ ..++..+..|.++.-.+..- +-+..+ ..-.+.+..+.. ..+.++..
T Consensus 188 Gv~~i~L~-~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~R~~~G~~~~~l~~~~d~lv~~~~~~~~~~i~l~ 266 (327)
T 3uc1_A 188 GVQGMRFN-IDDRLLSLNVVREGTYLLVATSGGYAKRTAIEEYPVQGRGGKGVLTVMYDRRRGRLVGALIVDDDSELYAV 266 (327)
T ss_dssp CEESSCCC-TTCCEEEEEECCTTCEEEEEETTSEEEEEEGGGSCBCCTTSCCEESSCCCTTTCSEEEEEEECTTCEEEEE
T ss_pred CeeeecCC-CCCEEEEEEEECCCCEEEEEeCCCcEEEEEHHHccccCcCCCcEEEEEecCCCCeEEEEEEeCCCccEEEE
Confidence 1111222 2345666665544 45888899999988765321 222222 221233433333 33456666
Q ss_pred eCCCeEEEEE
Q psy7057 177 GEDQCVCVYQ 186 (557)
Q Consensus 177 s~Dg~I~iwd 186 (557)
+.+|.+.-+.
T Consensus 267 T~~G~~ir~~ 276 (327)
T 3uc1_A 267 TSGGGVIRTA 276 (327)
T ss_dssp EGGGCEEEEE
T ss_pred cCCCeEEEEe
Confidence 7777766665
No 352
>2zux_A YESW protein; beta-propeller, lyase, rhamnose complex; HET: RAM; 1.32A {Bacillus subtilis} PDB: 2z8s_A* 2z8r_A*
Probab=58.94 E-value=1.8e+02 Score=30.59 Aligned_cols=104 Identities=14% Similarity=0.127 Sum_probs=60.2
Q ss_pred eEEEEECCCCeEEEEE--cccC-----------CcEEEEEEcCCC--EEEEEECCCeEEEEeCCCcEEEEE-eCCCCCEE
Q psy7057 60 TAKLWCLESQQCKLTI--RQHE-----------MAVWGVIQLANG--IIVTGCADKTIKLHSEEGEFLKTL-TGHTDCVR 123 (557)
Q Consensus 60 ~i~iwd~~~~~~~~~l--~~h~-----------~~V~~l~~~~~~--~l~sgs~dg~I~vwd~~~~~~~~l-~~h~~~V~ 123 (557)
.+..||...+++.... .... ..+....+.-+| .|+.|+. ++|.+|+.+... .+|.+.+.
T Consensus 293 ~v~A~d~~~~~L~~~W~~d~~~~~~~~~~gqg~h~~~vaDVDgDG~dEIv~Gs~-----~iD~dG~~L~st~~gHGDa~h 367 (591)
T 2zux_A 293 MLVAYNFRDGKLSKLWTLDSSKSGNEAFAGQGNHNLSIADVDGDGKDEIIFGSM-----AVDHDGKGMYSTGLGHGDALH 367 (591)
T ss_dssp EEEEEEEETTEEEEEEEEETTSTTCGGGSSCCCSCCEEECCSSSSSCEEEETTE-----EECTTSCEEEECSCCCCSCEE
T ss_pred EEEEEECCCCceEEEEEecCCCCCcccccccCCCCCeeEeCCCCCCceEEEeee-----EECCCCCEeeeCCCCCCCeeE
Confidence 3777887776653333 2210 122223333344 4554432 456666666554 37999888
Q ss_pred EEEEeCC--Ce-EEEEECCC----eEEEEECCCCeEEEEEeCCCCcEEEEEE
Q psy7057 124 GLAVLND--TD-FVSCSNDA----SIRVWDSTTGKCVHTMYGHPNFIYSVAA 168 (557)
Q Consensus 124 ~l~~~~~--~~-lvs~s~Dg----~I~vwd~~~~~~~~~~~~h~~~V~~l~~ 168 (557)
...+.|+ +. ++.+..++ -..+.|.++|+.+.........=++++-
T Consensus 368 v~dldP~r~GlEv~~~~E~~~~~~G~~~~dA~tG~vlw~~~~~~d~Gr~~~~ 419 (591)
T 2zux_A 368 TGDLDPGRPGLEVFQVHEDKNAKYGLSFRDAATGKILWGVYAGKDVGRGMAA 419 (591)
T ss_dssp EECCCTTSSSCEEEEECCCTTSSCSEEEEETTTCCEEEEECCSSCCCCEEEE
T ss_pred EeecCCCCCCcEEEEEecCCCCCCccEEEECCCCcEEEEcCCCCCCCceeEE
Confidence 8888887 33 66666652 3556899999999887654333344443
No 353
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=57.32 E-value=67 Score=36.38 Aligned_cols=37 Identities=27% Similarity=0.420 Sum_probs=30.0
Q ss_pred CEEEEEEeCCCe-EEEEECCCeEEEEECCCCeEEEEEe
Q psy7057 121 CVRGLAVLNDTD-FVSCSNDASIRVWDSTTGKCVHTMY 157 (557)
Q Consensus 121 ~V~~l~~~~~~~-lvs~s~Dg~I~vwd~~~~~~~~~~~ 157 (557)
.+.+++..++.. +++-+.|+++|+|++.+++++.+..
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 466677766644 6699999999999999999998864
No 354
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=53.30 E-value=1.7e+02 Score=28.59 Aligned_cols=76 Identities=18% Similarity=0.215 Sum_probs=47.3
Q ss_pred EEEcccCCcEEEEEEcCCCEEEEEEC-CCeEEEEeCC-CcE--EEEE----eCCCCCEEEEEEeCC----CeEE-EEE--
Q psy7057 73 LTIRQHEMAVWGVIQLANGIIVTGCA-DKTIKLHSEE-GEF--LKTL----TGHTDCVRGLAVLND----TDFV-SCS-- 137 (557)
Q Consensus 73 ~~l~~h~~~V~~l~~~~~~~l~sgs~-dg~I~vwd~~-~~~--~~~l----~~h~~~V~~l~~~~~----~~lv-s~s-- 137 (557)
..+...-...+.|+|.|++.++.+.. .|.|++++.. +.. +..+ .........|+++|+ +.|. +-+
T Consensus 25 ~~va~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~ 104 (347)
T 3das_A 25 RTVATGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSA 104 (347)
T ss_dssp EEEECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECS
T ss_pred EEeecCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecC
Confidence 34444456788999999995555566 8999999743 433 2212 123456899999995 5544 322
Q ss_pred CCCeEEEEECC
Q psy7057 138 NDASIRVWDST 148 (557)
Q Consensus 138 ~Dg~I~vwd~~ 148 (557)
.+..|.-|.+.
T Consensus 105 ~~~~v~R~~~~ 115 (347)
T 3das_A 105 SDNRIVRMLYD 115 (347)
T ss_dssp SSEEEEEEEBC
T ss_pred CCCEEEEEEeC
Confidence 34555556544
No 355
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=50.54 E-value=1.3e+02 Score=32.61 Aligned_cols=130 Identities=10% Similarity=0.131 Sum_probs=64.4
Q ss_pred eEEEEECCCCeEEE--EEcccCCcEEEEEEcCCC-EEEEEECCC--eEEEEeCCCcEEEEEeC------CCCCEEEEEEe
Q psy7057 60 TAKLWCLESQQCKL--TIRQHEMAVWGVIQLANG-IIVTGCADK--TIKLHSEEGEFLKTLTG------HTDCVRGLAVL 128 (557)
Q Consensus 60 ~i~iwd~~~~~~~~--~l~~h~~~V~~l~~~~~~-~l~sgs~dg--~I~vwd~~~~~~~~l~~------h~~~V~~l~~~ 128 (557)
.+.+||+.+.+-.. .+......- +++...++ +++.|+.++ .+.+||.....-..+.. ......++.+.
T Consensus 469 dv~~yd~~t~~W~~~~~~p~~R~~h-~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~ 547 (695)
T 2zwa_A 469 DNWIFDMKTREWSMIKSLSHTRFRH-SACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFD 547 (695)
T ss_dssp CCEEEETTTTEEEECCCCSBCCBSC-EEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEE
T ss_pred cEEEEeCCCCcEEECCCCCCCcccc-eEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEe
Confidence 46677777643221 111111111 23332244 777777654 68888855443333321 11222334445
Q ss_pred CC-Ce-EEEEEC--C-----CeEEEEECCCCe--------EEEEEeCC-CCcEEEEEEc-CCEEEEEeC--------CCe
Q psy7057 129 ND-TD-FVSCSN--D-----ASIRVWDSTTGK--------CVHTMYGH-PNFIYSVAAH-GDLITSGGE--------DQC 181 (557)
Q Consensus 129 ~~-~~-lvs~s~--D-----g~I~vwd~~~~~--------~~~~~~~h-~~~V~~l~~~-~~~l~s~s~--------Dg~ 181 (557)
.+ +. ++.|+. + ..+.+||+.+.+ .+...... .....++.++ +.+++.|+. ...
T Consensus 548 ~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~ 627 (695)
T 2zwa_A 548 PVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNS 627 (695)
T ss_dssp TTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTS
T ss_pred CCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCCCCCCe
Confidence 44 55 456654 2 458889987765 11221111 1122334445 777777774 345
Q ss_pred EEEEECCCC
Q psy7057 182 VCVYQNKAQ 190 (557)
Q Consensus 182 I~iwd~~~~ 190 (557)
+.+||..+.
T Consensus 628 v~~yd~~t~ 636 (695)
T 2zwa_A 628 IISLDPLSE 636 (695)
T ss_dssp EEEEETTTT
T ss_pred EEEEECCCC
Confidence 888997665
No 356
>3fbl_A Putative uncharacterized protein; AFV1, archaeal virus, extremophiles, lipothrixviridae, structural protein, DNA-binding protein; 1.95A {Acidianus filamentous virus 1}
Probab=48.60 E-value=19 Score=25.33 Aligned_cols=27 Identities=33% Similarity=0.463 Sum_probs=23.8
Q ss_pred HHHHhhhhcCCCChHHHHHHHHHHHhc
Q psy7057 496 HAAQAFIHTHHLSQMFLEQVANFIMTN 522 (557)
Q Consensus 496 ~~~~~~~~~~~l~~~~~~~v~~fi~~n 522 (557)
-+--+|-.+-+++|.-.+.|++||..|
T Consensus 55 naisafssrtgisqetaqkiadfitsn 81 (82)
T 3fbl_A 55 NAISAFSSRTGISQETAQKIADFITSN 81 (82)
T ss_dssp HHHHHHHTSTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHhhcccccHHHHHHHHHHHhcC
Confidence 355678899999999999999999987
No 357
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=44.39 E-value=2.3e+02 Score=27.57 Aligned_cols=133 Identities=8% Similarity=0.031 Sum_probs=68.7
Q ss_pred CCEEEEEECCCeEEEEeCC-CcEEEEE--eCCCCCEEEEEEeC--CCeEEEEECCC----eEEEEECCCC---eEEEE--
Q psy7057 90 NGIIVTGCADKTIKLHSEE-GEFLKTL--TGHTDCVRGLAVLN--DTDFVSCSNDA----SIRVWDSTTG---KCVHT-- 155 (557)
Q Consensus 90 ~~~l~sgs~dg~I~vwd~~-~~~~~~l--~~h~~~V~~l~~~~--~~~lvs~s~Dg----~I~vwd~~~~---~~~~~-- 155 (557)
++.|..|+..|.+++-+.. +..-..+ ......|.+|++.| .+.+..++..+ .|...+ ..+ +.+..
T Consensus 22 ~g~l~vgt~~Gl~~~~~~~~g~~W~~~~~~~~~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~-D~G~tW~~~~~~~ 100 (394)
T 3b7f_A 22 PVMLLVATIKGAWFLASDPARRTWELRGPVFLGHTIHHIVQDPREPERMLMAARTGHLGPTVFRSD-DGGGNWTEATRPP 100 (394)
T ss_dssp CCEEEEEETTEEEEEEECTTSCSEEEEEEESTTSEEEEEEECSSSTTCEEEEEEC--CCEEEEEES-STTSCCEECSBCC
T ss_pred CCEEEEEecCceEEEECCCCCCCceECCccCCCCceEEEEECCCCCCeEEEEecCCCCCccEEEeC-CCCCCceECCccc
Confidence 4477788877744333322 2222111 12345799999998 56666665555 444432 222 22211
Q ss_pred -EeC--------CCCcEEEEEEc----CCEEEEEeCCCeEEEEECCCC--ceEee-------------------CCccEE
Q psy7057 156 -MYG--------HPNFIYSVAAH----GDLITSGGEDQCVCVYQNKAQ--NSFMI-------------------PAMSVW 201 (557)
Q Consensus 156 -~~~--------h~~~V~~l~~~----~~~l~s~s~Dg~I~iwd~~~~--~~~~~-------------------~~~~v~ 201 (557)
+.. +...|.+|+++ +..+.+++..+.|...+-... +.+.. ....+.
T Consensus 101 ~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~ 180 (394)
T 3b7f_A 101 AFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSPQGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMH 180 (394)
T ss_dssp CCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEETTEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEEE
T ss_pred cCCCcccccccccccceeEEEeCCCCCCCEEEEEecCCcEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCcee
Confidence 110 11257778874 566777766666655542211 22211 123578
Q ss_pred EEEEcCC--CcEEEEEcCCcEEEE
Q psy7057 202 AVAILPN--SDIVTGSSDGIVRVF 223 (557)
Q Consensus 202 ~v~~~p~--g~l~sg~~Dg~I~iw 223 (557)
+|.+.|. +.+..+..++.|...
T Consensus 181 ~i~~d~~~~~~l~vg~~~ggl~~s 204 (394)
T 3b7f_A 181 SILVDPRDPKHLYIGMSSGGVFES 204 (394)
T ss_dssp EEEECTTCTTCEEEEEETBEEEEE
T ss_pred EEEECCCCCCEEEEEECCCCEEEE
Confidence 8999884 336666665555444
No 358
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=43.66 E-value=44 Score=37.89 Aligned_cols=29 Identities=34% Similarity=0.403 Sum_probs=24.9
Q ss_pred CCCEEEEEECCCeEEEEECCCCeEEEEEc
Q psy7057 48 KVNTLLSASWDMTAKLWCLESQQCKLTIR 76 (557)
Q Consensus 48 ~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~ 76 (557)
+..++++-+.|+++|+|++.+++++.+..
T Consensus 246 ~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 246 TYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp TTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred CCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 45688999999999999999999887753
No 359
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=41.61 E-value=2.9e+02 Score=27.90 Aligned_cols=52 Identities=12% Similarity=-0.006 Sum_probs=34.4
Q ss_pred CCcEEEEEEcCCCEEEEEECCC-eEEEEeC-CCcEE--EEEeC------CCCCEEEEEEeCC
Q psy7057 79 EMAVWGVIQLANGIIVTGCADK-TIKLHSE-EGEFL--KTLTG------HTDCVRGLAVLND 130 (557)
Q Consensus 79 ~~~V~~l~~~~~~~l~sgs~dg-~I~vwd~-~~~~~--~~l~~------h~~~V~~l~~~~~ 130 (557)
-...++|+|.|+|.|+.+...+ .|++++. .+... ..+.. ....+..|+++|+
T Consensus 26 l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pd 87 (454)
T 1cru_A 26 LNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPD 87 (454)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTT
T ss_pred CCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCC
Confidence 4467899999999666666665 6888874 34432 22221 2356789999994
No 360
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=41.06 E-value=2.4e+02 Score=26.81 Aligned_cols=137 Identities=12% Similarity=0.006 Sum_probs=74.9
Q ss_pred CCEEEEEECCCeEEEEECCC-------CeEEEEEcccCCcEEEEEE-cCCCEEEEEECCCeEEEEeC-----C-----Cc
Q psy7057 49 VNTLLSASWDMTAKLWCLES-------QQCKLTIRQHEMAVWGVIQ-LANGIIVTGCADKTIKLHSE-----E-----GE 110 (557)
Q Consensus 49 ~~~l~sgs~Dg~i~iwd~~~-------~~~~~~l~~h~~~V~~l~~-~~~~~l~sgs~dg~I~vwd~-----~-----~~ 110 (557)
..+++..+..|.++.-.+.. +.....+..+ +.+..+.. ..+..++..+.+|.+..++. . |.
T Consensus 109 ~~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~~~-d~lv~~~~~~~~~~i~l~T~~G~~irf~~~~v~~~gr~a~Gv 187 (307)
T 1zi0_A 109 GVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDG-DELIGVDLTSGEDEVMLFSAEGKVVRFKESSVRAMGCNTTGV 187 (307)
T ss_dssp TCEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCTT-CCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTTCCCE
T ss_pred CcEEEEEeCCCeEEEEEHHHhhccccCCeEEEEECCC-CEEEEEEEeCCCCEEEEECCCCcEEEEEHHHcCccCCCCCCe
Confidence 45678888888888776532 2222233434 44444433 34447778888888777762 1 11
Q ss_pred EEEEEeCCCCCEEEEEEeCC-CeEEEEECCCeEEEEECCC-------C--eEEEEEeCCCCcEEEEEE--cCCEEEEEeC
Q psy7057 111 FLKTLTGHTDCVRGLAVLND-TDFVSCSNDASIRVWDSTT-------G--KCVHTMYGHPNFIYSVAA--HGDLITSGGE 178 (557)
Q Consensus 111 ~~~~l~~h~~~V~~l~~~~~-~~lvs~s~Dg~I~vwd~~~-------~--~~~~~~~~h~~~V~~l~~--~~~~l~s~s~ 178 (557)
....+. ..+.|.++...++ ..+++.+..|.++-.++.. + .....+..-.+.+..+.. +...++..+.
T Consensus 188 ~~i~L~-~~d~Vv~~~~~~~~~~ll~~T~~G~~Kr~~~~e~~~~~Rg~kG~~~~~~~~~~~~lv~~~~v~~~~~l~~~t~ 266 (307)
T 1zi0_A 188 RGIRLG-EGDKVVSLIVPRGDGAILTATQNGYGKRTAVAEYPTKSRATKGVISIKVTERNGLVVGAVQVDDCDQIMMITD 266 (307)
T ss_dssp ECCCCC-TTCCEEEEECCCSSCEEEEEETTSEEEEECGGGSCCCCTTSCCEESSCCCTTTCSEEEEEEECTTCEEEEEES
T ss_pred EeEEeC-CCCEEEEEEEecCCCEEEEEEcCCceEEEEHHHhccCCCCCCCEEeeEecCCCCeEEEEEEeCCCceEEEEcC
Confidence 122232 2355666655443 4478889999988887631 1 111222222344444433 3345666677
Q ss_pred CCeEEEEEC
Q psy7057 179 DQCVCVYQN 187 (557)
Q Consensus 179 Dg~I~iwd~ 187 (557)
+|.+.-+..
T Consensus 267 ~g~~ir~~~ 275 (307)
T 1zi0_A 267 AGTLVRTRV 275 (307)
T ss_dssp SCCEEEEEG
T ss_pred CCcEEEEec
Confidence 776665553
No 361
>2agh_C Zinc finger protein HRX; transcription; NMR {Homo sapiens}
Probab=40.51 E-value=26 Score=20.31 Aligned_cols=18 Identities=22% Similarity=0.512 Sum_probs=12.9
Q ss_pred CCCChHHHHHHHHHHHhcccCC
Q psy7057 505 HHLSQMFLEQVANFIMTNSKSK 526 (557)
Q Consensus 505 ~~l~~~~~~~v~~fi~~n~~~~ 526 (557)
|=||- .|.+|+.+||-+-
T Consensus 5 nilps----dimdfvlkntpsm 22 (31)
T 2agh_C 5 NILPS----DIMDFVLKNTPSM 22 (31)
T ss_dssp CSSCH----HHHHHHHHHSCCC
T ss_pred ccChH----HHHHHHHhCChhH
Confidence 34664 4778999999753
No 362
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=39.01 E-value=95 Score=32.87 Aligned_cols=99 Identities=11% Similarity=0.077 Sum_probs=63.5
Q ss_pred CCcEEEEEEcCCC--EEEEEECCCeEEEEeCC-------CcE-------EEEEeCCCCCEEEEEEeCCCe-EEEEECCCe
Q psy7057 79 EMAVWGVIQLANG--IIVTGCADKTIKLHSEE-------GEF-------LKTLTGHTDCVRGLAVLNDTD-FVSCSNDAS 141 (557)
Q Consensus 79 ~~~V~~l~~~~~~--~l~sgs~dg~I~vwd~~-------~~~-------~~~l~~h~~~V~~l~~~~~~~-lvs~s~Dg~ 141 (557)
......+..+|+| .+++|-.+.++.++|.+ ++. ..... -.-.....+|.++|. +.|..-|..
T Consensus 322 pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~GlGPlHt~Fd~~G~aYTtlfidSq 400 (638)
T 3sbq_A 322 PKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LGLGPLHTTFDGRGNAYTTLFIDSQ 400 (638)
T ss_dssp SSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CCSCEEEEEECSSSEEEEEETTTTE
T ss_pred CCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-CCCcccEEEECCCCceEeeeeecce
Confidence 3444567889999 56666678899999833 221 12222 344577889999886 346678999
Q ss_pred EEEEECCCC----------eEEEEEeCCCCcEEEEEE-------cCCEEEEEeC
Q psy7057 142 IRVWDSTTG----------KCVHTMYGHPNFIYSVAA-------HGDLITSGGE 178 (557)
Q Consensus 142 I~vwd~~~~----------~~~~~~~~h~~~V~~l~~-------~~~~l~s~s~ 178 (557)
|..|++... ..+..+.-|-.+-.-.+. +|++|++...
T Consensus 401 vvkWni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~lnK 454 (638)
T 3sbq_A 401 VVKWNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALSK 454 (638)
T ss_dssp EEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEES
T ss_pred EEEEeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEecc
Confidence 999998643 456666555444333332 6777777653
No 363
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=37.52 E-value=53 Score=38.07 Aligned_cols=30 Identities=33% Similarity=0.402 Sum_probs=26.0
Q ss_pred CCCCEEEEEECCCeEEEEECCCCeEEEEEc
Q psy7057 47 AKVNTLLSASWDMTAKLWCLESQQCKLTIR 76 (557)
Q Consensus 47 ~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~ 76 (557)
.+..++++-+.|+++|+|++.+++++.+..
T Consensus 247 ~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 247 STYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp TTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred CCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 345789999999999999999999988754
No 364
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=37.43 E-value=63 Score=37.41 Aligned_cols=36 Identities=28% Similarity=0.436 Sum_probs=27.9
Q ss_pred EEEEEEeCCCe-EEEEECCCeEEEEECCCCeEEEEEe
Q psy7057 122 VRGLAVLNDTD-FVSCSNDASIRVWDSTTGKCVHTMY 157 (557)
Q Consensus 122 V~~l~~~~~~~-lvs~s~Dg~I~vwd~~~~~~~~~~~ 157 (557)
+.+++..++.. +++-+.|+++|+|++.+++++.+..
T Consensus 240 ~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 240 IISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp BSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 44445555544 5699999999999999999998864
No 365
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=33.23 E-value=3.2e+02 Score=25.96 Aligned_cols=98 Identities=7% Similarity=-0.018 Sum_probs=59.1
Q ss_pred CCEEEEEECCCeEEEEECCC-------CeEEEEEcccCCcEEEEEEc-CCCEEEEEECCCeEEEEeCC----------Cc
Q psy7057 49 VNTLLSASWDMTAKLWCLES-------QQCKLTIRQHEMAVWGVIQL-ANGIIVTGCADKTIKLHSEE----------GE 110 (557)
Q Consensus 49 ~~~l~sgs~Dg~i~iwd~~~-------~~~~~~l~~h~~~V~~l~~~-~~~~l~sgs~dg~I~vwd~~----------~~ 110 (557)
...++..+..|.++...+.. |.....+.. .+.+..+... ++..++..+.+|.+..+..+ |.
T Consensus 114 ~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~-~d~lv~~~~~~~~~~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv 192 (312)
T 1suu_A 114 DAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLND-KDFVTSAEIVFKDEKVICLSKKGSAFIFNSRDVRLTNRGTQGV 192 (312)
T ss_dssp TCEEEEEETTSEEEEEEGGGGCC----CEECBCCCT-TCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTTBCCE
T ss_pred CCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCC-CCEEEEEEEeCCCCEEEEEeCCCcEEEEEHHHccccCCCCCCe
Confidence 56688888888888877632 222333443 3445454444 34478888999998888621 12
Q ss_pred EEEEEeCCCCCEEEEEEeC-CCeEEEEECCCeEEEEECC
Q psy7057 111 FLKTLTGHTDCVRGLAVLN-DTDFVSCSNDASIRVWDST 148 (557)
Q Consensus 111 ~~~~l~~h~~~V~~l~~~~-~~~lvs~s~Dg~I~vwd~~ 148 (557)
....+.. .+.|.++...+ +..+++.+..|..+...+.
T Consensus 193 ~~i~L~~-~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~~ 230 (312)
T 1suu_A 193 CGMKLKE-GDLFVKVLSVKENPYLLIVSENGYGKRLNMS 230 (312)
T ss_dssp ECCCCCT-TCCEEEEEECTTCSEEEEEETTSEEEEEEGG
T ss_pred EeEEeCC-CCEEEEEEEECCCCeEEEEECCCceEEEEHH
Confidence 2223332 34556655543 3457788888888887763
No 366
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=31.70 E-value=78 Score=34.47 Aligned_cols=66 Identities=6% Similarity=0.044 Sum_probs=41.8
Q ss_pred EEEEEEeCCCeEEEEECCCeEEEEECCCCeEEEEEeCCCC-------------cEEEEEEcCCEEEEEe--CCCeEEEEE
Q psy7057 122 VRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMYGHPN-------------FIYSVAAHGDLITSGG--EDQCVCVYQ 186 (557)
Q Consensus 122 V~~l~~~~~~~lvs~s~Dg~I~vwd~~~~~~~~~~~~h~~-------------~V~~l~~~~~~l~s~s--~Dg~I~iwd 186 (557)
|.++. .++..+++-+.|.++|+|++++++++.+..-... .-.-+..-+.++++=+ ..|..++|.
T Consensus 224 Is~~~-~~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL~~~~~~~~s~L~~~~~~~~~Lrl~~~~lv~y~P~~~G~Fk~~~ 302 (729)
T 3f7f_A 224 ISCKL-FHERYLIVLTQNCHLKIWDLTSFTLIQDYDMVSQSDSDPSHFRKVEAVGEYLSLYNNTLVTLLPLENGLFQMGT 302 (729)
T ss_dssp EEEEE-ETTTEEEEEETTCEEEEEETTTTEEEEEEETTTTSCCCSSCCCCCCSCCCCEEESSSEEEEEETTTTCEEEEEE
T ss_pred EEEec-cCCcEEEEEEcCCeEEEEEcCCCceEEeeccccCccccccccCcccCcchhHhheeeEEEEEecCCCCeEEEEE
Confidence 55444 3456678999999999999999999887753111 1111122234544433 567888888
Q ss_pred CC
Q psy7057 187 NK 188 (557)
Q Consensus 187 ~~ 188 (557)
+.
T Consensus 303 l~ 304 (729)
T 3f7f_A 303 LL 304 (729)
T ss_dssp EE
T ss_pred EE
Confidence 53
No 367
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=30.83 E-value=3.3e+02 Score=29.26 Aligned_cols=141 Identities=11% Similarity=0.185 Sum_probs=70.6
Q ss_pred CCCEEEEEECC----CeEEEEeCCCcEEEEEe-C-------CCCCEEEEEEeC-CCe-EEEEECC------CeEEEEECC
Q psy7057 89 ANGIIVTGCAD----KTIKLHSEEGEFLKTLT-G-------HTDCVRGLAVLN-DTD-FVSCSND------ASIRVWDST 148 (557)
Q Consensus 89 ~~~~l~sgs~d----g~I~vwd~~~~~~~~l~-~-------h~~~V~~l~~~~-~~~-lvs~s~D------g~I~vwd~~ 148 (557)
.+.+++.|+.+ ..+.++|.....-..+. . ....-.+++..+ ++. ++.|+.+ ..+.+||+.
T Consensus 397 ~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~ 476 (695)
T 2zwa_A 397 GNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMK 476 (695)
T ss_dssp SSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETT
T ss_pred CCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCC
Confidence 33366667653 35677773332222222 1 111122334443 555 5566543 347788887
Q ss_pred CCeEEE--EEeCCCCcEEEEEE-cCCEEEEEeCCC--eEEEEECCCC--ceEee------CCccEEEEEEcCC-Cc-EEE
Q psy7057 149 TGKCVH--TMYGHPNFIYSVAA-HGDLITSGGEDQ--CVCVYQNKAQ--NSFMI------PAMSVWAVAILPN-SD-IVT 213 (557)
Q Consensus 149 ~~~~~~--~~~~h~~~V~~l~~-~~~~l~s~s~Dg--~I~iwd~~~~--~~~~~------~~~~v~~v~~~p~-g~-l~s 213 (557)
+.+-.. .+......-.++.+ ++..++.|+.++ .+.+||..+. ..+.. ......++.+..+ +. ++.
T Consensus 477 t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~ 556 (695)
T 2zwa_A 477 TREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIIL 556 (695)
T ss_dssp TTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEE
T ss_pred CCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEE
Confidence 754222 22111122233443 677777777554 6889997665 22221 1112223444544 55 566
Q ss_pred EEc--C-----CcEEEEecCCCC
Q psy7057 214 GSS--D-----GIVRVFSANPDR 229 (557)
Q Consensus 214 g~~--D-----g~I~iwd~~~~~ 229 (557)
||. + ..+.+||..+..
T Consensus 557 GG~~~~~~~~~~~v~~yd~~~~~ 579 (695)
T 2zwa_A 557 GGGFMDQTTVSDKAIIFKYDAEN 579 (695)
T ss_dssp CCBCTTSSCBCCEEEEEEECTTC
T ss_pred CCcCCCCCeeeCcEEEEEccCCc
Confidence 665 2 458888887665
No 368
>2xpn_B SPT6, chromatin structure modulator; transcription, elongation, histone chaperone, RNA polymerase mRNA export; 1.95A {Encephalitozoon cuniculi} PDB: 2xpo_B
Probab=28.14 E-value=17 Score=20.43 Aligned_cols=10 Identities=30% Similarity=0.634 Sum_probs=7.9
Q ss_pred CCCccceeee
Q psy7057 430 GPTEYDFVFS 439 (557)
Q Consensus 430 ~g~~yd~vf~ 439 (557)
-|.|||||..
T Consensus 11 tG~EYrYile 20 (26)
T 2xpn_B 11 TGEEYRYVLE 20 (26)
T ss_pred CCceEEEEee
Confidence 4779999974
No 369
>2hzs_I RNA polymerase II mediator complex subunit 8; beta barrel, channel, helix, transcription; 2.70A {Saccharomyces cerevisiae}
Probab=25.48 E-value=13 Score=20.72 Aligned_cols=9 Identities=67% Similarity=1.221 Sum_probs=6.7
Q ss_pred CCCcccccc
Q psy7057 544 FTGKIHSHH 552 (557)
Q Consensus 544 ~~~~~~~~~ 552 (557)
|||+-|-||
T Consensus 17 ftgekhhhh 25 (27)
T 2hzs_I 17 FTGEKHHHH 25 (27)
T ss_dssp HHCCCCSSC
T ss_pred ecccccccc
Confidence 788877666
No 370
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=24.33 E-value=5.7e+02 Score=25.87 Aligned_cols=29 Identities=14% Similarity=0.234 Sum_probs=24.1
Q ss_pred ccEEEEEEcCCCc--EEEEECCCcEEEEcCC
Q psy7057 13 MDVRSLSVTPDGC--ILSASRDKSAKLWKPN 41 (557)
Q Consensus 13 ~~V~~l~~spdg~--l~sgs~Dg~V~iWd~~ 41 (557)
..-+.|+|.|||. |+.+.+.|.|++++..
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~ 44 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPE 44 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTT
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCC
Confidence 3457899999985 8889999999999753
No 371
>2vjv_A Transposase ORFA; DNA-binding protein, protein-DNA complex, HUH motif, DNA stem loop, transposition; 1.90A {Helicobacter pylori} SCOP: d.58.57.1 PDB: 2vhg_A 2vic_A 2vju_A 2vih_A 2a6m_A 2a6o_A
Probab=22.18 E-value=24 Score=30.40 Aligned_cols=36 Identities=22% Similarity=0.253 Sum_probs=10.3
Q ss_pred HHHHHHHHHHHhcccCCCCCCcccCCCCCCCcCCCCCcc
Q psy7057 510 MFLEQVANFIMTNSKSKQGPTVTQTPPSGEYCDPFTGKI 548 (557)
Q Consensus 510 ~~~~~v~~fi~~n~~~~~~~~~~~~~~~~~~~dp~~~~~ 548 (557)
.+++.|.++|.+|-+... ......--.|.|||||++
T Consensus 123 ~~~~~i~~YI~~q~~~~~---~~~~~~~~~~~~~~~~~~ 158 (159)
T 2vjv_A 123 APLNVVKQYIENQQNSNR---PKQKEKWKSYVDNLQTKA 158 (159)
T ss_dssp SCHHHHHHHHTC---------------------------
T ss_pred ccHHHHHHHHHhCcccCc---cchHHHHHHHhccccccc
Confidence 578899999988765311 111112345899999985
No 372
>1gvp_A Gene V protein; DNA-binding protein, DNA replication; 1.60A {Escherichia coli} SCOP: b.40.4.7 PDB: 1vqb_A 2gn5_A 1vqj_A 1vqi_A 1vqg_A 1vqh_A 1vqf_A 1yhb_A 1yha_A 2gva_A 2gvb_A 1vqd_A 1vqe_A 1gkh_A 1vqc_A 1ae2_A 1vqa_A 1ae3_A
Probab=21.49 E-value=58 Score=24.94 Aligned_cols=22 Identities=23% Similarity=0.526 Sum_probs=18.3
Q ss_pred CCCCCccceeeeeeeccCCCCC
Q psy7057 428 KQGPTEYDFVFSVDIEEGKPPL 449 (557)
Q Consensus 428 ~~~g~~yd~vf~vd~~~g~p~~ 449 (557)
++-|..|=+.|+|-+++|.||.
T Consensus 35 v~lGG~fp~~~~v~Le~gQppY 56 (87)
T 1gvp_A 35 VDLGNEYPVLVKITLDEGQPAY 56 (87)
T ss_dssp ECCSSSSCEEEEEECCTTCCCC
T ss_pred EEcCCCccEEEEEecCCCCCCC
Confidence 5677789999999999998543
No 373
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=20.33 E-value=5.4e+02 Score=24.16 Aligned_cols=156 Identities=8% Similarity=0.021 Sum_probs=75.7
Q ss_pred CeEEEEECCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEE----CCCeEEEEeCCCcEEEEEeCCCCCEEEEEEeCCCe-
Q psy7057 59 MTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGC----ADKTIKLHSEEGEFLKTLTGHTDCVRGLAVLNDTD- 132 (557)
Q Consensus 59 g~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs----~dg~I~vwd~~~~~~~~l~~h~~~V~~l~~~~~~~- 132 (557)
..|+..++...+... +... .. ..+++++ .|+-.. ....|..-+..+.....+..+.. ..+++++.
T Consensus 88 ~~Iy~i~~dg~~~~~-l~~~--~~--~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~~lt~~~~----~~~~~~g~~ 158 (302)
T 3s25_A 88 NSLCRIKRNGHGSTV-LDPD--PC--IYASLIGNYIYYLHYDTQTATSLYRIRIDGEEKKKIKNHYL----FTCNTSDRY 158 (302)
T ss_dssp EEEEEEETTSCCCEE-EECS--CE--EEEEEETTEEEEEEESSSSCEEEEEEETTSCCCEEEESSCC----CCSEEETTE
T ss_pred CeEEEEeCCCCcceE-eecC--Cc--cEEEEeCCEEEEEeecCCCCceEEEEECCCCCeEEEeCCCc----eEeeEECCE
Confidence 357777776654322 2211 21 2445555 555444 33445555677766666665533 23444544
Q ss_pred EE-EEECCCeEEEEECCCCeEEEEEeCCCCcEEEEEEcCCEEEEEeCC--CeEEEEECCCCceEeeCCccEEEEEEcCCC
Q psy7057 133 FV-SCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAAHGDLITSGGED--QCVCVYQNKAQNSFMIPAMSVWAVAILPNS 209 (557)
Q Consensus 133 lv-s~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~l~s~s~D--g~I~iwd~~~~~~~~~~~~~v~~v~~~p~g 209 (557)
|. +......|.+-++..+.....+.+ ... ..+.+++.+|+-.... ..|..-++............+. .+.|++
T Consensus 159 iy~t~~g~~~Iy~~~l~g~~~~~l~~~-~~~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~~~~Lt~~~~~--~~~~~g 234 (302)
T 3s25_A 159 FYYNNPKNGQLYRYDTASQSEALFYDC-NCY-KPVVLDDTNVYYMDVNRDNAIVHVNINNPNPVVLTEANIE--HYNVYG 234 (302)
T ss_dssp EEEECTTTCCEEEEETTTTEEEEEECS-CEE-EEEEEETTEEEEEEGGGTTEEEEECSSSCCCEECSCSCEE--EEEEET
T ss_pred EEEEeCCCceEEEEECCCCCEEEEeCC-Ccc-ceeeecCCEEEEEEcCCCcEEEEEECCCCCeEEEeCCCcc--eEEECC
Confidence 44 433467888888776654433332 111 1233467766644433 2454444443322222233343 367777
Q ss_pred c-EEEEE--cCCcEEEEecCC
Q psy7057 210 D-IVTGS--SDGIVRVFSANP 227 (557)
Q Consensus 210 ~-l~sg~--~Dg~I~iwd~~~ 227 (557)
. |.-+. ..+.|..-+++.
T Consensus 235 ~~Iy~~~~~~~~~i~~~~~DG 255 (302)
T 3s25_A 235 SLIFYQRGGDNPALCVVKNDG 255 (302)
T ss_dssp TEEEEEECSSSCEEEEEETTS
T ss_pred CEEEEEECCCCcEEEEEECCC
Confidence 6 44332 234555555554
No 374
>1t95_A Hypothetical protein AF0491; shwachman-bodian-diamond syndrome protein orthologue, unknown function; 1.90A {Archaeoglobus fulgidus} SCOP: a.5.8.1 d.235.1.2 d.58.11.3 PDB: 1p9q_C
Probab=20.09 E-value=55 Score=30.29 Aligned_cols=38 Identities=21% Similarity=0.322 Sum_probs=28.5
Q ss_pred ccccccCCChHHHHHhhhhcCCCChH----------HHHHHHHHHHhcc
Q psy7057 485 KLPYNVSEDPWHAAQAFIHTHHLSQM----------FLEQVANFIMTNS 523 (557)
Q Consensus 485 ~~~~~~~~~~~~~~~~~~~~~~l~~~----------~~~~v~~fi~~n~ 523 (557)
+-.|.. +|+.+++..-|++.+|..+ -..||++||.+|+
T Consensus 70 ~~~FGT-~d~~eIi~~IL~kGe~Q~s~~eR~~~~e~k~r~Ii~~Ia~~~ 117 (240)
T 1t95_A 70 RKIFGT-DDVFEIARKIILEGEVQITAEQRREMLEAKRKQIINFISRNT 117 (240)
T ss_dssp HHHHSC-CCHHHHHHHHHHHSEECCCHHHHHHHHHHHHHHHHHHHHHHE
T ss_pred HHhhCC-CCHHHHHHHHHhcCCcccCchHHHHHHHHHHHHHHHHHHHhc
Confidence 334533 6799999999998886543 3457999999988
Done!