RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy7057
(557 letters)
>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor
acetylhydrolase IB subunit alpha {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 317
Score = 95.2 bits (235), Expect = 3e-22
Identities = 48/184 (26%), Positives = 82/184 (44%), Gaps = 10/184 (5%)
Query: 8 LYGHSMDVRSLSVTPDGCIL-SASRDKSAKLWKPNDLSPGAKVNTLLSASWDMTAKLWCL 66
GH VR + DG ++ S S D++ ++W ++ L + W
Sbjct: 139 FTGHREWVRMVRPNQDGTLIASCSNDQTVRVW---VVATKECKAELREHRHVVECISWAP 195
Query: 67 ESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKL-HSEEGEFLKTLTGHTDCVRGL 125
ES ++ +++G DKTIK+ G L TL GH + VRG+
Sbjct: 196 ESSYSSISEATGSETKK--SGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGV 253
Query: 126 AVLNDTDF-VSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAAH--GDLITSGGEDQCV 182
+ F +SC++D ++RVWD +C+ T+ H +F+ S+ H + +G DQ V
Sbjct: 254 LFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTV 313
Query: 183 CVYQ 186
V++
Sbjct: 314 KVWE 317
Score = 90.6 bits (223), Expect = 2e-20
Identities = 48/203 (23%), Positives = 87/203 (42%), Gaps = 29/203 (14%)
Query: 50 NTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSEE 108
+ ++SAS D T K+W +++ C T H V V +G +I + D+T+++
Sbjct: 114 DHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA 173
Query: 109 G-EFLKTLTGHTDCVRGLAVLNDTD---------------------FVSCSNDASIRVWD 146
E L H V ++ ++ +S S D +I++WD
Sbjct: 174 TKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWD 233
Query: 147 STTGKCVHTMYGHPNFIYSVAAH--GDLITSGGEDQCVCVY---QNKAQNSFMIPAMSVW 201
+TG C+ T+ GH N++ V H G I S +D+ + V+ + + V
Sbjct: 234 VSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVT 293
Query: 202 AVAILPNSD-IVTGSSDGIVRVF 223
++ + +VTGS D V+V+
Sbjct: 294 SLDFHKTAPYVVTGSVDQTVKVW 316
Score = 75.5 bits (184), Expect = 1e-15
Identities = 61/333 (18%), Positives = 103/333 (30%), Gaps = 101/333 (30%)
Query: 8 LYGHSMDVRSLSVTPDGCILSASRDKSAKLWKPNDLSPGAKVNTLLSASWDMTAKLWCLE 67
L GH V + P + ++SAS D T K+W E
Sbjct: 13 LSGHRSPVTRVIFHPVF-------------------------SVMVSASEDATIKVWDYE 47
Query: 68 SQQCKLTIRQHEMAVWGVIQLA-------------------------------------- 89
+ + T++ H +V +
Sbjct: 48 TGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSV 107
Query: 90 -----NGIIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDTDFV-SCSNDASI 142
IV+ DKTIK+ + G +KT TGH + VR + D + SCSND ++
Sbjct: 108 SIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTV 167
Query: 143 RVWDSTTGKCVHTMYGHPNFIYSVAAH----------------------GDLITSGGEDQ 180
RVW T +C + H + + ++ G + SG D+
Sbjct: 168 RVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDK 227
Query: 181 CVCVYQ---NKAQNSFMIPAMSVWAVAILPNSD-IVTGSSDGIVRVFSANPDRQAEDAVQ 236
+ ++ + + V V I++ + D +RV+ R
Sbjct: 228 TIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCM--KTL 285
Query: 237 AQYAEEVKKLK-SANEQEIGGVKVSDDGIVRVF 268
+ V L + V S D V+V+
Sbjct: 286 NAHEHFVTSLDFHKTAPYV--VTGSVDQTVKVW 316
Score = 62.8 bits (151), Expect = 2e-11
Identities = 33/144 (22%), Positives = 58/144 (40%), Gaps = 29/144 (20%)
Query: 6 TALYGHSMDVRSLSVTPDGCILSASRDKSAKLWKPNDLSPGAKVNTLLSASWDMTAKLWC 65
+++ + S P +LS SRDK T K+W
Sbjct: 200 SSISEATGSETKKSGKPGPFLLSGSRDK--------------------------TIKMWD 233
Query: 66 LESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKL-HSEEGEFLKTLTGHTDCVR 123
+ + C +T+ H+ V GV+ + G I++ DKT+++ + +KTL H V
Sbjct: 234 VSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVT 293
Query: 124 GLAVLNDTD-FVSCSNDASIRVWD 146
L V+ S D +++VW+
Sbjct: 294 SLDFHKTAPYVVTGSVDQTVKVWE 317
Score = 59.4 bits (142), Expect = 3e-10
Identities = 25/117 (21%), Positives = 42/117 (35%), Gaps = 7/117 (5%)
Query: 114 TLTGHTDCVRGLAVLNDTD-FVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAAHGDL 172
L+GH V + VS S DA+I+VWD TG T+ GH + + ++
Sbjct: 12 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSG 71
Query: 173 ITSGGEDQCVCVYQNKAQNSFMIPAMSVWAVAILP------NSDIVTGSSDGIVRVF 223
+ + Q I M + IV+ S D ++++
Sbjct: 72 KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMW 128
Score = 32.0 bits (71), Expect = 0.17
Identities = 11/71 (15%), Positives = 25/71 (35%), Gaps = 6/71 (8%)
Query: 143 RVWDSTTGKCVHTMYGHPNFIYSVAAH--GDLITSGGEDQCVCVY---QNKAQNSFMIPA 197
+ W + + GH + + V H ++ S ED + V+ + +
Sbjct: 1 KEWI-PRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHT 59
Query: 198 MSVWAVAILPN 208
SV ++ +
Sbjct: 60 DSVQDISFDHS 70
>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G
protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}
Length = 340
Score = 89.8 bits (221), Expect = 3e-20
Identities = 29/143 (20%), Positives = 56/143 (39%), Gaps = 7/143 (4%)
Query: 50 NTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSEE 108
+S + D +AKLW + C+ T HE + + NG TG D T +L
Sbjct: 197 RLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLR 256
Query: 109 GEFLKTLTGHTDCVRGLAVL----NDTDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIY 164
+ H + + G+ + + ++ +D + VWD+ + GH N +
Sbjct: 257 ADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVS 316
Query: 165 SVAAH--GDLITSGGEDQCVCVY 185
+ G + +G D + ++
Sbjct: 317 CLGVTDDGMAVATGSWDSFLKIW 339
Score = 69.4 bits (168), Expect = 2e-13
Identities = 27/144 (18%), Positives = 54/144 (37%), Gaps = 30/144 (20%)
Query: 8 LYGHSMDVRSLSVTPDGCILSASRDKSAKLWKPNDLSPGAKVNTLLSASWDMTAKLWCLE 67
GH D+ ++ P+G N + S D T +L+ L
Sbjct: 222 FTGHESDINAICFFPNG-------------------------NAFATGSDDATCRLFDLR 256
Query: 68 SQQCKLTIRQHEM--AVWGVIQLANG-IIVTGCADKTIKL-HSEEGEFLKTLTGHTDCVR 123
+ Q +T + + V +G +++ G D + + + + L GH + V
Sbjct: 257 ADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVS 316
Query: 124 GLAVLNDTD-FVSCSNDASIRVWD 146
L V +D + S D+ +++W+
Sbjct: 317 CLGVTDDGMAVATGSWDSFLKIWN 340
Score = 58.6 bits (140), Expect = 6e-10
Identities = 54/276 (19%), Positives = 91/276 (32%), Gaps = 40/276 (14%)
Query: 8 LYGHSMDVRSLSVTPDGCILSASRDKSAKLWKPNDLSPGAKVNTLLSASWDMTAKLWCLE 67
L GH + ++ D L+SAS D +W
Sbjct: 51 LRGHLAKIYAMHWGTDS-------------------------RLLVSASQDGKLIIWDSY 85
Query: 68 SQQCKLTIRQHEMAVWGVI------QLANGIIVTGCADKTIKLHSEEGEFLKTLTGHTDC 121
+ I V +A G + C+ +K + L GHT
Sbjct: 86 TTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGY 145
Query: 122 VRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFI--YSVAAHGDLITSGGED 179
+ L+D V+ S D + +WD TG+ T GH + S+A L SG D
Sbjct: 146 LSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACD 205
Query: 180 QCVCVY---QNKAQNSFMIPAMSVWAVAILPNSD-IVTGSSDGIVRVFSANPDRQAEDAV 235
++ + + +F + A+ PN + TGS D R+F D++
Sbjct: 206 ASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYS 265
Query: 236 QAQYAEEVKKLK-SANEQEIGGVKVSDDGIVRVFSA 270
+ + S + + + + DD V+ A
Sbjct: 266 HDNIICGITSVSFSKSGRLL--LAGYDDFNCNVWDA 299
Score = 47.0 bits (110), Expect = 3e-06
Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Query: 113 KTLTGHTDCVRGLAVLNDTD-FVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAAHGD 171
+TL GH + + D+ VS S D + +WDS T VH + +++ + A
Sbjct: 49 RTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPS 108
Score = 37.4 bits (85), Expect = 0.003
Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 3 KLSTALYGHSMDVRSLSVTPDG-CILSASRDKSAKLW 38
+ L GH V L VT DG + + S D K+W
Sbjct: 303 DRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339
Score = 35.9 bits (81), Expect = 0.012
Identities = 13/67 (19%), Positives = 26/67 (38%), Gaps = 5/67 (7%)
Query: 151 KCVHTMYGHPNFIYSVAAH--GDLITSGGEDQCV---CVYQNKAQNSFMIPAMSVWAVAI 205
+ T+ GH IY++ L+ S +D + Y ++ + + V A
Sbjct: 46 RTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAY 105
Query: 206 LPNSDIV 212
P+ + V
Sbjct: 106 APSGNYV 112
>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein
7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}
Length = 342
Score = 76.8 bits (187), Expect = 7e-16
Identities = 58/243 (23%), Positives = 91/243 (37%), Gaps = 21/243 (8%)
Query: 3 KLSTALYGHSMDVRSLSVTPDGCILSASRDKSAKLWKPNDLSPGAKVNTLLS-------- 54
K L GH+ V S + + I ++ +
Sbjct: 48 KCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHE 107
Query: 55 -----ASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHS-EE 108
S D T ++W +E+ QC + H AV V +V+G D +K+ E
Sbjct: 108 KRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGR-RVVSGAYDFMVKVWDPET 166
Query: 109 GEFLKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAA 168
L TL GHT+ V L + VS S D SIRVWD TG C+HT+ GH + +
Sbjct: 167 ETCLHTLQGHTNRVYSLQF-DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL 225
Query: 169 HGDLITSGGEDQCVCVYQNKAQNSFMIPAMSVWAVAILPNSD-----IVTGSSDGIVRVF 223
+++ SG D V ++ K + + ++T S DG V+++
Sbjct: 226 KDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLW 285
Query: 224 SAN 226
Sbjct: 286 DLK 288
Score = 70.6 bits (171), Expect = 7e-14
Identities = 30/141 (21%), Positives = 65/141 (46%), Gaps = 13/141 (9%)
Query: 50 NTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKL----H 105
++S S D + ++W +E+ C T+ H+ G+ +L + I+V+G AD T+K+
Sbjct: 188 IHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGM-ELKDNILVSGNADSTVKIWDIKT 246
Query: 106 SEEGEFLKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMY-----GHP 160
+ + L+ H V L + ++ S+D ++++WD TG+ + + G
Sbjct: 247 GQCLQTLQGPNKHQSAVTCLQFNKNF-VITSSDDGTVKLWDLKTGEFIRNLVTLESGGSG 305
Query: 161 NFIYSVAAH--GDLITSGGED 179
++ + A + G +
Sbjct: 306 GVVWRIRASNTKLVCAVGSRN 326
Score = 69.1 bits (167), Expect = 2e-13
Identities = 33/125 (26%), Positives = 56/125 (44%), Gaps = 2/125 (1%)
Query: 108 EGEFLKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVA 167
E + K L GH D V VS S+D +++VW + TGKC+ T+ GH ++S
Sbjct: 5 ELKSPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQ 64
Query: 168 AHGDLITSGGEDQCVCVYQNKAQNSFMIPAMSVWAVAILPNSD--IVTGSSDGIVRVFSA 225
++I SG D+ + V+ + V + + +V+GS D +RV+
Sbjct: 65 MRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDI 124
Query: 226 NPDRQ 230
+
Sbjct: 125 ETGQC 129
Score = 63.3 bits (152), Expect = 2e-11
Identities = 39/169 (23%), Positives = 73/169 (43%), Gaps = 4/169 (2%)
Query: 64 WCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHS-EEGEFLKTLTGHTDCV 122
W + ++ H+ V +Q IV+G D T+K+ S G+ L+TL GHT V
Sbjct: 1 WRRGELKSPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV 60
Query: 123 RGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAAHGDLITSGGEDQCV 182
+ ++ ++ T +C+HT+YGH + + + H + SG D +
Sbjct: 61 WSSQMRDNIIISGSTDRTLKVWNAETG-ECIHTLYGHTSTVRCMHLHEKRVVSGSRDATL 119
Query: 183 CVYQNKAQNSFMIPAMSVWAVAIL--PNSDIVTGSSDGIVRVFSANPDR 229
V+ + + V AV + +V+G+ D +V+V+ +
Sbjct: 120 RVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETET 168
Score = 62.9 bits (151), Expect = 3e-11
Identities = 62/231 (26%), Positives = 89/231 (38%), Gaps = 29/231 (12%)
Query: 2 YKLSTALYGHSMDVRSLSVTPDGCILSASRDKSAKLWKPNDLSPGAKVNTLLSASWDMTA 61
K L GH V + + G N ++S S D T
Sbjct: 6 LKSPKVLKGHDDHVIT-CLQFCG-------------------------NRIVSGSDDNTL 39
Query: 62 KLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHSEEGEFLKTLTGHTDC 121
K+W + +C T+ H VW N II ++E GE + TL GHT
Sbjct: 40 KVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTST 99
Query: 122 VRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAAHGDLITSGGEDQC 181
VR L++ VS S DA++RVWD TG+C+H + GH + V G + SG D
Sbjct: 100 VRC-MHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFM 158
Query: 182 VCVYQNKAQNSFMIPAMSVWAVAILPNSD--IVTGSSDGIVRVFSANPDRQ 230
V V+ + + V L +V+GS D +RV+
Sbjct: 159 VKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNC 209
>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 293
Score = 74.9 bits (182), Expect = 2e-15
Identities = 30/141 (21%), Positives = 58/141 (41%), Gaps = 10/141 (7%)
Query: 54 SASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHSEEGEFLK 113
SAS D T K+W + + T+ H+ + +Q + ++V+G +D TI+L E
Sbjct: 153 SASGDRTIKVWNTSTCEFVRTLNGHKRGIA-CLQYRDRLVVSGSSDNTIRLWDIECGACL 211
Query: 114 TLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTG---------KCVHTMYGHPNFIY 164
+ + + ++ VS + D I+VWD C+ T+ H ++
Sbjct: 212 RVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVF 271
Query: 165 SVAAHGDLITSGGEDQCVCVY 185
+ I S D + ++
Sbjct: 272 RLQFDEFQIVSSSHDDTILIW 292
Score = 63.7 bits (153), Expect = 9e-12
Identities = 57/289 (19%), Positives = 102/289 (35%), Gaps = 41/289 (14%)
Query: 10 GHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPNDLSPGAKVNTL-------LSASWDMTA 61
S V L D I+S RD + K+W D + L L +D
Sbjct: 13 ETSKGVYCLQ--YDDQKIVSGLRDNTIKIW---DKNTLECKRILTGHTGSVLCLQYDERV 67
Query: 62 KL---------WCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKL----HSEE 108
+ + L H ++ NG++VT D++I + +
Sbjct: 68 IITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTD 127
Query: 109 GEFLKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAA 168
+ L GH V +D VS S D +I+VW+++T + V T+ GH I +
Sbjct: 128 ITLRRVLVGHRAAVNV-VDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY 186
Query: 169 HGDLITSGGEDQCVCVY--QNKAQNSFMIPAMSVWAVAILPNSDIVTGSSDGIVRVFSAN 226
L+ SG D + ++ + A + + N IV+G+ DG ++V+
Sbjct: 187 RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVW--- 243
Query: 227 PDRQAEDAVQAQYAEEVKKLKSANEQEIGGVK--------VSDDGIVRV 267
D A +A + + + ++ S D + +
Sbjct: 244 -DLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILI 291
Score = 61.0 bits (146), Expect = 8e-11
Identities = 30/107 (28%), Positives = 47/107 (43%), Gaps = 12/107 (11%)
Query: 50 NTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKL----- 104
++S S D T +LW +E C L + + + I+ N IV+G D IK+
Sbjct: 189 RLVVSGSSDNTIRLWDIECGAC-LRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVA 247
Query: 105 -----HSEEGEFLKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWD 146
L+TL H+ V L ++ VS S+D +I +WD
Sbjct: 248 ALDPRAPAGTLCLRTLVEHSGRVFRLQF-DEFQIVSSSHDDTILIWD 293
Score = 51.4 bits (121), Expect = 1e-07
Identities = 19/92 (20%), Positives = 36/92 (39%), Gaps = 2/92 (2%)
Query: 112 LKTLTGHTDCVRGLAVL--NDTDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAAH 169
L+ + ++ +G+ L +D VS D +I++WD T +C + GH + +
Sbjct: 5 LQRIHCRSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYD 64
Query: 170 GDLITSGGEDQCVCVYQNKAQNSFMIPAMSVW 201
+I +G D V V+
Sbjct: 65 ERVIITGSSDSTVRVWDVNTGEMLNTLIHHCE 96
>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 388
Score = 74.8 bits (182), Expect = 4e-15
Identities = 33/167 (19%), Positives = 67/167 (40%), Gaps = 30/167 (17%)
Query: 50 NTLLSASWDMTAKLWCLESQQCKLTIRQ-------HEMAVWGVIQLANG-IIVTGCADKT 101
+ + S D ++W E+ + H+ +V+ V+ +G +V+G D++
Sbjct: 218 KYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRS 277
Query: 102 IKLHSEEG-------------EFLKTLTGHTDCVRGLAVLNDTDF-VSCSNDASIRVWDS 147
+KL + + T GH D V +A + ++ +S S D + WD
Sbjct: 278 VKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDK 337
Query: 148 TTGKCVHTMYGHPNFIYSVAAH--------GDLITSGGEDQCVCVYQ 186
+G + + GH N + SVA ++ +G D +++
Sbjct: 338 KSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWK 384
Score = 59.4 bits (142), Expect = 4e-10
Identities = 52/279 (18%), Positives = 106/279 (37%), Gaps = 62/279 (22%)
Query: 10 GHSMDVRSLSVTPDGCILSASRDKSAKLWKPNDLSPGAKV-------------------- 49
H+ V + + DG L+ +K+ ++++ +D S A++
Sbjct: 60 DHTSVVCCVKFSNDGEYLATGCNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPS 119
Query: 50 --------------NTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLAN-GIIV 94
L + + D ++W +E+++ + ++ HE ++ + + +V
Sbjct: 120 SDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLV 179
Query: 95 TGCADKTIKLHSEEGEFLKTLTGHTDCVRGLAVLN--DTDFVSCSNDASIRVWDSTTGKC 152
+G D+T+++ D V +AV + S D ++RVWDS TG
Sbjct: 180 SGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFL 239
Query: 153 VHTM-------YGHPNFIYSVAAH--GDLITSGGEDQCVCVY---------------QNK 188
V + GH + +YSV G + SG D+ V ++
Sbjct: 240 VERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGT 299
Query: 189 AQNSFMIPAMSVWAVAILPNSD-IVTGSSDGIVRVFSAN 226
+ +++ V +VA N + I++GS D V +
Sbjct: 300 CEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKK 338
Score = 42.9 bits (99), Expect = 8e-05
Identities = 10/73 (13%), Positives = 23/73 (31%)
Query: 112 LKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAAHGD 171
L HT V + ND ++++ + + +V+ + G V +
Sbjct: 55 LHKSLDHTSVVCCVKFSNDGEYLATGCNKTTQVYRVSDGSLVARLSDDSAANKDPENLNT 114
Query: 172 LITSGGEDQCVCV 184
+ + V
Sbjct: 115 SSSPSSDLYIRSV 127
Score = 34.8 bits (78), Expect = 0.023
Identities = 18/80 (22%), Positives = 28/80 (35%), Gaps = 23/80 (28%)
Query: 11 HSMDVRSLSVTPDG-CILSASRDKSAKLWKP----------------------NDLSPGA 47
H V S++ T + ILS S+D+ W N S G
Sbjct: 307 HKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGP 366
Query: 48 KVNTLLSASWDMTAKLWCLE 67
+ N + S D A++W +
Sbjct: 367 EYNVFATGSGDCKARIWKYK 386
>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 355
Score = 70.7 bits (171), Expect = 8e-14
Identities = 33/133 (24%), Positives = 54/133 (40%), Gaps = 7/133 (5%)
Query: 114 TLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVA-AHGDL 172
TL GH V D ++ ++D IRV+DS K + + GH ++++ AHG +
Sbjct: 7 TLRGHMTSVITCLQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGGI 66
Query: 173 ITSGGEDQCVCVYQNKAQNSFMIPAMSVWAVAILPNSDI------VTGSSDGIVRVFSAN 226
+ SG D+ V V+ K + V L + VTGS D + V+
Sbjct: 67 LVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLP 126
Query: 227 PDRQAEDAVQAQY 239
+ D +
Sbjct: 127 KESSVPDHGEEHD 139
Score = 57.6 bits (137), Expect = 1e-09
Identities = 30/119 (25%), Positives = 48/119 (40%), Gaps = 5/119 (4%)
Query: 72 KLTIRQHEMAVWGVIQLANGIIVTGCADKTIKL-HSEEGEFLKTLTGHTDCVRGLAVLND 130
+ T+R H +V +Q + ++TG DK I++ S +FL L+GH V L +
Sbjct: 5 RTTLRGHMTSVITCLQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHG 64
Query: 131 TDFVSCSNDASIRVWDSTT----GKCVHTMYGHPNFIYSVAAHGDLITSGGEDQCVCVY 185
VS S D ++RVWD + I +G D + V+
Sbjct: 65 GILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVW 123
Score = 56.4 bits (134), Expect = 3e-09
Identities = 23/161 (14%), Positives = 55/161 (34%), Gaps = 30/161 (18%)
Query: 6 TALYGHSMDVRSLSVTPDGCILSASRDKSAKLWKPNDLSPGAKVNTLLSASWDMTAKLWC 65
T L GH V + + + N +++ + D +++
Sbjct: 6 TTLRGHMTSVIT-CLQFED-------------------------NYVITGADDKMIRVYD 39
Query: 66 LESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHSEEGEFLKTLTGHTDCVRGL 125
+++ L + H+ VW + GI+V+G D+T+++ + + +
Sbjct: 40 SINKKFLLQLSGHDGGVWALKYAHGGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRC 99
Query: 126 AVLNDTDF----VSCSNDASIRVWDSTTGKCVHTMYGHPNF 162
+ + V+ S D ++ VW V ++
Sbjct: 100 LDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDY 140
Score = 54.9 bits (130), Expect = 1e-08
Identities = 23/130 (17%), Positives = 50/130 (38%), Gaps = 3/130 (2%)
Query: 57 WDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHSEEGEFLKTLT 116
D T + + Q A+ G+++L++ +V+ AD +I+ K
Sbjct: 221 MDTTIR-IWDLENGELMYTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSY 279
Query: 117 GHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMY-GHPNFIYSVAAHGD-LIT 174
HT+ + + ++ +++ +GK VH + I+SV G L+
Sbjct: 280 HHTNLSAITTFYVSDNILVSGSENQFNIYNLRSGKLVHANILKDADQIWSVNFKGKTLVA 339
Query: 175 SGGEDQCVCV 184
+ +D +
Sbjct: 340 AVEKDGQSFL 349
Score = 46.0 bits (107), Expect = 6e-06
Identities = 49/311 (15%), Positives = 93/311 (29%), Gaps = 64/311 (20%)
Query: 3 KLSTALYGHSMDVRSLSVTPDGCILSAS-------------------------------- 30
K L GH V +L G ++S S
Sbjct: 44 KFLLQLSGHDGGVWALKYAHGGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIV 103
Query: 31 ------------RDKSAKLWKPNDLSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQH 78
RD + +W L + V E+ +R H
Sbjct: 104 EYKNIKYIVTGSRDNTLHVW---KLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGH 160
Query: 79 EMAVWGVIQLANGIIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDTDFV-SC 136
+V V I+V+G D T+ + + + L L+GHTD + ++ S
Sbjct: 161 MASVRTVSG-HGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISA 219
Query: 137 SNDASIRVWDSTTGKCVHTMYGHPNFIYSVAAHGDLITSGGEDQCVCVYQNKAQNSFMIP 196
S D +IR+WD G+ ++T+ GH + + + S D + + +
Sbjct: 220 SMDTTIRIWDLENGELMYTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSY 279
Query: 197 AMS--VWAVAILPNSDIVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEI 254
+ + +I+ S+ +++ + + V + +I
Sbjct: 280 HHTNLSAITTFYVSDNILVSGSENQFNIYN------------LRSGKLVHANILKDADQI 327
Query: 255 GGVKVSDDGIV 265
V +V
Sbjct: 328 WSVNFKGKTLV 338
Score = 44.9 bits (104), Expect = 2e-05
Identities = 6/93 (6%), Positives = 24/93 (25%), Gaps = 2/93 (2%)
Query: 56 SWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHS-EEGEFLK- 113
+ + + + H + I+ ++ +++ G+ +
Sbjct: 259 AAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGSENQFNIYNLRSGKLVHA 318
Query: 114 TLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWD 146
+ D + + T + D +
Sbjct: 319 NILKDADQIWSVNFKGKTLVAAVEKDGQSFLEI 351
Score = 35.3 bits (79), Expect = 0.015
Identities = 3/35 (8%), Positives = 13/35 (37%)
Query: 4 LSTALYGHSMDVRSLSVTPDGCILSASRDKSAKLW 38
+ + + + S++ + + +D + L
Sbjct: 316 VHANILKDADQIWSVNFKGKTLVAAVEKDGQSFLE 350
>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 393
Score = 62.9 bits (151), Expect = 3e-11
Identities = 34/225 (15%), Positives = 69/225 (30%), Gaps = 20/225 (8%)
Query: 6 TALYGHSMDVRSLSVTPDGCILSASRDKSAKLWKPNDLSPGAKVNTLLSASWDMTAKLWC 65
+ S S+ ++ G I + + + ++ + + L P + S + +
Sbjct: 178 ESPMTPSQFATSVDISERGLIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSV 237
Query: 66 LESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHSEEGEFLKTLTGHTDCVRGL 125
S Q L H+ +G I L ++ + + + H+ V L
Sbjct: 238 KFSPQGSLLAIAHDSNSFGCITLYETEFGERI--GSLSVPTHSSQASLGEFAHSSWVMSL 295
Query: 126 AVLNDTD-FVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVA------AHGDLITSGGE 178
+ + + S D +R WD T + + T+ H + I HGD + G
Sbjct: 296 SFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGV 355
Query: 179 DQCVCVYQNKAQNSFMIPAMSVWAVAILPNSDIVTGSSDGIVRVF 223
+ + N + D +R F
Sbjct: 356 FDVK-----------FLKKGWRSGMGADLNESLCCVCLDRSIRWF 389
Score = 59.1 bits (141), Expect = 6e-10
Identities = 27/313 (8%), Positives = 81/313 (25%), Gaps = 93/313 (29%)
Query: 6 TALYGHSMDVRSLSVTPDGCILSASRDKSAKLWKPNDLSP-------------------- 45
A H D+ S+S +S S D K+W L
Sbjct: 8 NAGKAHDADIFSVSACNSF-TVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHV 66
Query: 46 ---------GAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEM----------AVWGV- 85
++ + + S+ + + + + ++ + W +
Sbjct: 67 DVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALK 126
Query: 86 -----IQLANGIIVTGCADKTIKL-------------------HSEEGEFLKTLTGHTDC 121
+L + +V T + E +++ +
Sbjct: 127 WGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQF 186
Query: 122 VRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVA--------AHGDLI 173
+ + + N+ ++++ + +T + ++ + I + G L+
Sbjct: 187 ATSVDISERGLIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLL 246
Query: 174 TSGGEDQCVCVY-------------------QNKAQNSFMIPAMSVWAVAILPNSD-IVT 213
+ ++A + V +++ + + + +
Sbjct: 247 AIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCS 306
Query: 214 GSSDGIVRVFSAN 226
DG +R +
Sbjct: 307 AGWDGKLRFWDVK 319
Score = 39.1 bits (89), Expect = 0.001
Identities = 14/96 (14%), Positives = 28/96 (29%), Gaps = 17/96 (17%)
Query: 152 CVHTMYGHPNFIYSVAAHGDLITSGGEDQCVCVYQNK--------------AQNSFMIPA 197
+ H I+SV+A S D + V+ NK + +
Sbjct: 6 TANAGKAHDADIFSVSACNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHH 65
Query: 198 MSVWAVAILPNSD---IVTGSSDGIVRVFSANPDRQ 230
+ V + + T S G + + + +
Sbjct: 66 VDVLQAIERDAFELCLVATTSFSGDLLFYRITREDE 101
Score = 31.7 bits (70), Expect = 0.24
Identities = 17/92 (18%), Positives = 30/92 (32%), Gaps = 32/92 (34%)
Query: 50 NTLLSASWDMTAKLWCLESQQCKLTIRQHEMAV---------------------WGVIQL 88
TL SA WD + W +++++ T+ H + + V L
Sbjct: 302 ETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFL 361
Query: 89 ANGI-----------IVTGCADKTIKLHSEEG 109
G + C D++I+ E G
Sbjct: 362 KKGWRSGMGADLNESLCCVCLDRSIRWFREAG 393
>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 299
Score = 56.9 bits (135), Expect = 2e-09
Identities = 13/63 (20%), Positives = 19/63 (30%), Gaps = 2/63 (3%)
Query: 109 GEFLKTLTGHTDCVRGLAVLNDTD-FVSCSNDASIRVWDSTTGKCVHTMY-GHPNFIYSV 166
G + GH + L+ D S + I WD +TG H I +
Sbjct: 2 GSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGI 61
Query: 167 AAH 169
Sbjct: 62 KTT 64
Score = 48.1 bits (112), Expect = 1e-06
Identities = 27/200 (13%), Positives = 53/200 (26%), Gaps = 26/200 (13%)
Query: 3 KLSTALYGHSMDVRSLSVTPDGCILSASRDKSAKLWKPNDLSPGAKVNTLLSASWDMTAK 62
+ YGH+ + +LS + DG TL SA +
Sbjct: 3 SIDQVRYGHNKAITALSSSADG-------------------------KTLFSADAEGHIN 37
Query: 63 LWCLESQQCKLTIRQ-HEMAVWGVIQLANGIIVTGCADKTIKLHSEEGEFLKTLTGHTDC 121
W + + H + G+ + G + T D +K+ G + + +
Sbjct: 38 SWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANK 97
Query: 122 VRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAAHGDLITSGGEDQC 181
+ + A+ + T VA D Q
Sbjct: 98 LSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQD 157
Query: 182 VCVYQNKAQNSFMIPAMSVW 201
V+ K + + ++
Sbjct: 158 SKVHVYKLSGASVSEVKTIV 177
Score = 42.7 bits (98), Expect = 7e-05
Identities = 14/94 (14%), Positives = 28/94 (29%), Gaps = 4/94 (4%)
Query: 57 WDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHS----EEGEFL 112
+ E N + TG D ++ + + + +
Sbjct: 203 VIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPII 262
Query: 113 KTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWD 146
V + LN+T VS D++I+ W+
Sbjct: 263 IKGAHAMSSVNSVIWLNETTIVSAGQDSNIKFWN 296
Score = 36.9 bits (83), Expect = 0.004
Identities = 15/83 (18%), Positives = 29/83 (34%), Gaps = 6/83 (7%)
Query: 150 GKCVHTMYGHPNFIYSVAAH--GDLITSGGEDQCVCVYQNKAQNSFMI----PAMSVWAV 203
G YGH I ++++ G + S + + + S + A + +
Sbjct: 2 GSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGI 61
Query: 204 AILPNSDIVTGSSDGIVRVFSAN 226
D+ T S D ++V A
Sbjct: 62 KTTSKGDLFTVSWDDHLKVVPAG 84
>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 287
Score = 55.7 bits (132), Expect = 4e-09
Identities = 19/93 (20%), Positives = 35/93 (37%), Gaps = 2/93 (2%)
Query: 56 SWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHS--EEGEFLK 113
S ++ W + + + ++ ++ TG D I ++S + +K
Sbjct: 193 SREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIK 252
Query: 114 TLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWD 146
L H D V L + VS DA I+ W+
Sbjct: 253 ALNAHKDGVNNLLWETPSTLVSSGADACIKRWN 285
Score = 54.2 bits (128), Expect = 1e-08
Identities = 21/95 (22%), Positives = 30/95 (31%), Gaps = 8/95 (8%)
Query: 108 EGEFLKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVA 167
E LKT++GH + L V +S S D I W S++ H N I S+
Sbjct: 2 HDEVLKTISGHNKGITALTV---NPLISGSYDGRIMEWSSSSMHQ-----DHSNLIVSLD 53
Query: 168 AHGDLITSGGEDQCVCVYQNKAQNSFMIPAMSVWA 202
S ++ F A
Sbjct: 54 NSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASA 88
Score = 48.4 bits (113), Expect = 9e-07
Identities = 9/70 (12%), Positives = 25/70 (35%), Gaps = 2/70 (2%)
Query: 118 HTDCVRGLAVLNDTDFVSCSNDASIRVWD-STTGKCVHTMYGHPNFIYSVAAHGD-LITS 175
+ + + + S D +I ++ K + + H + + ++ + S
Sbjct: 215 PAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPSTLVS 274
Query: 176 GGEDQCVCVY 185
G D C+ +
Sbjct: 275 SGADACIKRW 284
Score = 46.5 bits (108), Expect = 4e-06
Identities = 35/288 (12%), Positives = 84/288 (29%), Gaps = 27/288 (9%)
Query: 3 KLSTALYGHSMDVRSLSVTPDGCILSASRDKSAKLWKPNDLSPG--AKVNTLLSASWDMT 60
++ + GH+ + +L+V P ++S S D W + + + +L ++
Sbjct: 4 EVLKTISGHNKGITALTVNP---LISGSYDGRIMEWSSSSMHQDHSNLIVSLDNSKAQEY 60
Query: 61 AKLWCLESQQCKLTIRQHEMAVWGVIQLANG--IIVTGCADKTIKLHSEEGEFLKTLTGH 118
+ + ++ + + + V N V D + L S G+ +K++ +
Sbjct: 61 SSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLN 120
Query: 119 TDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAAHGD------- 171
+ N + S ++
Sbjct: 121 SPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAG 180
Query: 172 ----------LITSGGEDQCVCVYQNKAQNSFMIPAMSVWAVAILPNSDIVTGSSDGIVR 221
L + + +K PA + + TGS D +
Sbjct: 181 DVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIF 240
Query: 222 VFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFS 269
++S + A+ A + + V L + V D ++ ++
Sbjct: 241 IYSVKRPMKIIKALNA-HKDGVNNLLWETPSTL--VSSGADACIKRWN 285
>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 337
Score = 54.8 bits (130), Expect = 9e-09
Identities = 22/136 (16%), Positives = 37/136 (27%), Gaps = 4/136 (2%)
Query: 54 SASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHSEEGEFLK 113
+ D T + W L + + G +++
Sbjct: 200 TGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKY 259
Query: 114 TLTGHTDCVRGLAVLNDTD-FVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAAH--G 170
L H CV L FVS D + W + G + + + S
Sbjct: 260 QLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQ-SKESSSVLSCDISVDD 318
Query: 171 DLITSGGEDQCVCVYQ 186
I +G D+ VY+
Sbjct: 319 KYIVTGSGDKKATVYE 334
Score = 50.2 bits (118), Expect = 3e-07
Identities = 40/242 (16%), Positives = 72/242 (29%), Gaps = 25/242 (10%)
Query: 8 LYGHSMDVRSLSVTPDGCILSASRDKSAKLWKPNDLSPGAKVNTLLSASWDMTAKLWCLE 67
+RS + PDGC L + S L S++ A +
Sbjct: 93 CLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPD 152
Query: 68 SQQCKLTIRQHEMAVWGVIQ--------------------LANGIIVTGCADKTIKLHSE 107
S+ C +AVW + + TG D T++
Sbjct: 153 SKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDL 212
Query: 108 EGEFLKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVA 167
T + L ++++ ++S + ++ H + + S+
Sbjct: 213 REGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLK 272
Query: 168 AH--GDLITSGGEDQCVCVYQNKAQNSFMIPAM--SVWAVAILPNSD-IVTGSSDGIVRV 222
G S G+D + ++ S SV + I + IVTGS D V
Sbjct: 273 FAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISVDDKYIVTGSGDKKATV 332
Query: 223 FS 224
+
Sbjct: 333 YE 334
Score = 48.3 bits (113), Expect = 1e-06
Identities = 18/100 (18%), Positives = 33/100 (33%), Gaps = 8/100 (8%)
Query: 109 GEFLKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHT-----MYGHPNFI 163
+ TL H + V + + N T V ++VWD + N+I
Sbjct: 42 ARQINTL-NHGEVVCAVTISNPTRHVYTGGKGCVKVWDISHPGNKSPVSQLDCLNRDNYI 100
Query: 164 YSVAAH--GDLITSGGEDQCVCVYQNKAQNSFMIPAMSVW 201
S G + GGE + ++ A + ++
Sbjct: 101 RSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSS 140
Score = 38.3 bits (87), Expect = 0.002
Identities = 29/292 (9%), Positives = 75/292 (25%), Gaps = 38/292 (13%)
Query: 10 GHSMDVRSLSVTPDGCILSASRDKSAKLWKPND-----------------------LSPG 46
H V +++++ + K+W + L P
Sbjct: 49 NHGEVVCAVTISNPTRHVYTGGKGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPD 108
Query: 47 AKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHS 106
+ + ++ + + K + A + + + + C
Sbjct: 109 GCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVW 168
Query: 107 EEGEFLKTLTGHTDCVRGLAVLNDTD---FVSCSNDASIRVWDSTTGKCVHTMYGHPNFI 163
+ + D + D ++R WD G+ + + I
Sbjct: 169 DLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQ-LQQHDFTSQI 227
Query: 164 YSVAAH----GDLITSGGEDQCVCVYQNKAQNSFMIPAMSVWAVAILPNSD-IVTGSSDG 218
+S+ + + V + + V ++ V+ D
Sbjct: 228 FSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDN 287
Query: 219 IVRVFSANPDRQAEDAVQAQYAEEVKKLK-SANEQEIGGVKVSDDGIVRVFS 269
++ + Q++ + V S +++ I V S D V+
Sbjct: 288 LLNAWRTPYGAS---IFQSKESSSVLSCDISVDDKYI--VTGSGDKKATVYE 334
>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 311
Score = 51.1 bits (120), Expect = 1e-07
Identities = 10/60 (16%), Positives = 21/60 (35%), Gaps = 3/60 (5%)
Query: 129 NDTDFVSCSNDASIRVWDSTTGKCVHTMYGH---PNFIYSVAAHGDLITSGGEDQCVCVY 185
+ T S S D +I++W+ T K T+ + + + S + +
Sbjct: 249 DGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFV 308
Score = 45.3 bits (105), Expect = 9e-06
Identities = 10/82 (12%), Positives = 19/82 (23%), Gaps = 2/82 (2%)
Query: 122 VRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAAH--GDLITSGGED 179
L D + N S+ + H + G SG
Sbjct: 20 AVVLGNTPAGDKIQYCNGTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVH 79
Query: 180 QCVCVYQNKAQNSFMIPAMSVW 201
V ++ + + V+
Sbjct: 80 GNVRIWDTTQTTHILKTTIPVF 101
Score = 43.4 bits (100), Expect = 4e-05
Identities = 15/90 (16%), Positives = 27/90 (30%), Gaps = 3/90 (3%)
Query: 60 TAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKL-HSEEGEFLKTLTGH 118
+ + I + ADKTIK+ + + KT+
Sbjct: 220 DGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVG 279
Query: 119 TDC-VRGLAVLNDTD-FVSCSNDASIRVWD 146
T + L ++ VS S + I +
Sbjct: 280 TRIEDQQLGIIWTKQALVSISANGFINFVN 309
Score = 42.2 bits (97), Expect = 1e-04
Identities = 27/265 (10%), Positives = 61/265 (23%), Gaps = 41/265 (15%)
Query: 3 KLSTALYGHSMDVRSLSVTPDGCIL-SASRDKSAKLWKPND------------------- 42
+ HS +P G S + ++W
Sbjct: 49 TDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDI 108
Query: 43 -----LSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGC 97
A V + + R + + I +
Sbjct: 109 SWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDD 168
Query: 98 ADKTIKLHSEEGEFLKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMY 157
I + + F S D +I +++ G
Sbjct: 169 NTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFE 228
Query: 158 GHPNFIYSVAAH---------GDLITSGGEDQCVCVYQ---NKAQNSFMIPA-MSVWAVA 204
+ + G I S D+ + ++ K + + + + +
Sbjct: 229 DDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLG 288
Query: 205 ILPNSD-IVTGSSDGIVRVFSANPD 228
I+ +V+ S++G + NP+
Sbjct: 289 IIWTKQALVSISANGFINFV--NPE 311
Score = 36.0 bits (81), Expect = 0.009
Identities = 9/115 (7%), Positives = 27/115 (23%), Gaps = 3/115 (2%)
Query: 90 NGIIVTGCADKTIKLHSEEGEFLKTLTGHTDCVRGLAVLNDTDFV-SCSNDASIRVWDST 148
I + + T H+ + S ++R+WD+T
Sbjct: 29 GDKIQYCNGTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTT 88
Query: 149 TG--KCVHTMYGHPNFIYSVAAHGDLITSGGEDQCVCVYQNKAQNSFMIPAMSVW 201
T+ + ++ + + + + ++
Sbjct: 89 QTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLT 143
Score = 27.9 bits (60), Expect = 2.9
Identities = 26/296 (8%), Positives = 71/296 (23%), Gaps = 41/296 (13%)
Query: 15 VRSLSVTPDGCILSASRDKSAKLWKPNDLSPGAKV----------------NTLLSASWD 58
L TP G + S L+ S
Sbjct: 20 AVVLGNTPAGDKIQYCNGTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVH 79
Query: 59 MTAKLWCLE------------------SQQCKLTIRQHEMAVWGVIQLANGIIVTGCADK 100
++W ++ G + + +
Sbjct: 80 GNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSN 139
Query: 101 TIKLHSEEGEFLKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMYGHP 160
++T + + K VH++ +P
Sbjct: 140 GNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNP 199
Query: 161 NFIYSVA---AHGDLITSGGEDQCVCVYQNKAQNSFMIPAMSVWAVAILPNSDIVTGSSD 217
+ + ++ +G + V+++ + + + I + S+D
Sbjct: 200 DGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASAD 259
Query: 218 GIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPD 273
+++++ + + E+ + +Q + V +S +G + NP+
Sbjct: 260 KTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQAL--VSISANGFINFV--NPE 311
>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 342
Score = 50.6 bits (119), Expect = 2e-07
Identities = 9/97 (9%), Positives = 25/97 (25%), Gaps = 7/97 (7%)
Query: 112 LKTLTGHTDCVRGLAVLNDTDF-VSCSNDASIRVWDSTTGKCVHTM---YGHPNFIYSVA 167
++ D + + ++ + S D S+ V+ + + + +
Sbjct: 4 VQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCN 63
Query: 168 AHGD---LITSGGEDQCVCVYQNKAQNSFMIPAMSVW 201
+ I G + SF +
Sbjct: 64 FIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEA 100
Score = 47.2 bits (110), Expect = 3e-06
Identities = 15/170 (8%), Positives = 43/170 (25%), Gaps = 24/170 (14%)
Query: 57 WDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLA-----NGIIVTGCADKTIKLHSEEG-- 109
+ + + L + + + + +A D + + +
Sbjct: 168 NNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQG 227
Query: 110 --------------EFLKTLTGHTDCVRGLAVLNDTDFVSC-SNDASIRVWDSTTGKCVH 154
T V + F+ +D I W+ T K +
Sbjct: 228 DDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIK 287
Query: 155 TMY-GHPNFIYSVAAHGDLITSGGEDQCVCVYQNKAQNSFMIPAMSVWAV 203
+ + + +A +++ D + + A S++ +
Sbjct: 288 NFAKFNEDSVVKIACSDNILCLATSDDTFKTN-AAIDQTIELNASSIYII 336
Score = 41.8 bits (96), Expect = 2e-04
Identities = 12/85 (14%), Positives = 30/85 (35%), Gaps = 3/85 (3%)
Query: 38 WKPNDLSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGC 97
+ N + + L +A D W L++++ + I ++ I+
Sbjct: 252 YPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIACSDNILCLAT 311
Query: 98 ADKTIKLHSEEGEFLKTLTGHTDCV 122
+D T K + +T+ + +
Sbjct: 312 SDDTFKTN---AAIDQTIELNASSI 333
Score = 37.5 bits (85), Expect = 0.003
Identities = 8/79 (10%), Positives = 21/79 (26%), Gaps = 28/79 (35%)
Query: 10 GHSMDVRSLSVTPDGCILSASRDKSAKLWKPNDLSPGAKVNTLLSASWDMTAKLWCLESQ 69
+ + + P + LL SWD + ++ + Q
Sbjct: 9 APKDYISDIKIIPSK-------------------------SLLLITSWDGSLTVYKFDIQ 43
Query: 70 QCKLTIRQ---HEMAVWGV 85
+ + Q ++ +
Sbjct: 44 AKNVDLLQSLRYKHPLLCC 62
Score = 31.0 bits (68), Expect = 0.37
Identities = 6/33 (18%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Query: 199 SVWAVAILPNSD-IVTGSSDGIVRVFSANPDRQ 230
+ + I+P+ ++ S DG + V+ + +
Sbjct: 13 YISDIKIIPSKSLLLITSWDGSLTVYKFDIQAK 45
Score = 29.8 bits (65), Expect = 0.78
Identities = 6/79 (7%), Positives = 22/79 (27%), Gaps = 6/79 (7%)
Query: 92 IIVTGCADKTIKL----HSEEGEFLKTLTGHTDCVRGLAVLNDTD--FVSCSNDASIRVW 145
+++ D ++ + + L + + +++TD + I
Sbjct: 25 LLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKV 84
Query: 146 DSTTGKCVHTMYGHPNFIY 164
D + + +
Sbjct: 85 DLIGSPSFQALTNNEANLG 103
Score = 29.0 bits (63), Expect = 1.4
Identities = 19/271 (7%), Positives = 53/271 (19%), Gaps = 52/271 (19%)
Query: 7 ALYGHSMDVRSLSVTPDG--CILSASRDKSAKLWKPND---------------------- 42
+ + + + I +
Sbjct: 51 QSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKY 110
Query: 43 --LSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADK 100
A L D + + + + + + ++ G +
Sbjct: 111 GDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNS 170
Query: 101 TIKLHSEEGEFLKTLTGHTDCVRGLAVL------NDTDFVSCSNDASIRVWDSTTG---- 150
++ T ++ + S D + V
Sbjct: 171 QVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDY 230
Query: 151 -----------KCVHTMYGHPNFIYSVAAHGD--LITSGGEDQCVCVY--QNKAQNSFMI 195
+ + S+ + + G D + + Q + +
Sbjct: 231 NSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFA 290
Query: 196 PAMSVWAVAILPNSDI-VTGSSDGIVRVFSA 225
V I + +I +SD + +A
Sbjct: 291 KFNEDSVVKIACSDNILCLATSDDTFKTNAA 321
>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos
taurus) [TaxId: 9913]}
Length = 371
Score = 49.9 bits (117), Expect = 4e-07
Identities = 15/91 (16%), Positives = 32/91 (35%), Gaps = 5/91 (5%)
Query: 116 TGHTDCVRGLAVLND-TDFVSCSNDASIRVWDSTTGK--CVHTMYGHPNFIYSVAAH--G 170
+ + + A D T C N+ + +++ + K VH + H + V
Sbjct: 4 SFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDS 63
Query: 171 DLITSGGEDQCVCVYQNKAQNSFMIPAMSVW 201
+ I + G D+ V+ K + +
Sbjct: 64 NRIVTCGTDRNAYVWTLKGRTWKPTLVILRI 94
Score = 48.7 bits (114), Expect = 1e-06
Identities = 13/75 (17%), Positives = 25/75 (33%), Gaps = 4/75 (5%)
Query: 92 IIVTGCADKTIKLHSEEG---EFLKTLTGHTDCVRGLAVLNDTD-FVSCSNDASIRVWDS 147
I + + ++ + G + L H V G+ D++ V+C D + VW
Sbjct: 21 QIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTL 80
Query: 148 TTGKCVHTMYGHPNF 162
T+
Sbjct: 81 KGRTWKPTLVILRIN 95
Score = 46.4 bits (108), Expect = 5e-06
Identities = 17/159 (10%), Positives = 45/159 (28%), Gaps = 7/159 (4%)
Query: 41 NDLSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCAD 99
+ + A + + S D T L + + T+ + + V + ++ G
Sbjct: 205 HGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFITESSLVAAGHDC 264
Query: 100 KTIKLHSEEGEFLKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMYGH 159
+ + + G D + + T N + + H
Sbjct: 265 FPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLH 324
Query: 160 PNFIYSVAAHGD------LITSGGEDQCVCVYQNKAQNS 192
N + ++ + G D + ++ ++ S
Sbjct: 325 KNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSLES 363
Score = 44.8 bits (104), Expect = 2e-05
Identities = 29/264 (10%), Positives = 66/264 (25%), Gaps = 51/264 (19%)
Query: 15 VRSLSVTPDG-CILSASRDKSAKLWKP------------------NDLSPGAKVNTLLSA 55
+ + D I + +++ + N +++
Sbjct: 10 ISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTC 69
Query: 56 SWDMTAKLWCLESQQCKLTIRQH---EMAVWGVIQLANGIIVTGCADKTIKLHSEEGEFL 112
D A +W L+ + K T+ A G + I + E E
Sbjct: 70 GTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQEND 129
Query: 113 KTLTGHTDCVRGLAVLNDTDFV------SCSNDASIRVWDSTTGK--------------- 151
+ H VL+ + S D R++ + +
Sbjct: 130 WWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMP 189
Query: 152 ---CVHTMYGHPNFIYSVAAHGDLITSGGEDQCVCVY-----QNKAQNSFMIPAMSVWAV 203
+ +++ V + V + A + + + AV
Sbjct: 190 FGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAV 249
Query: 204 AILPNSDIVTGSSDGIVRVFSANP 227
+ S +V D +F+ +
Sbjct: 250 TFITESSLVAAGHDCFPVLFTYDS 273
Score = 41.8 bits (96), Expect = 2e-04
Identities = 20/185 (10%), Positives = 51/185 (27%), Gaps = 11/185 (5%)
Query: 53 LSASWDMTAKLWCLESQQCKLTIRQHEMAVWGV-IQLANGIIVTGCADKTIKL-HSEEGE 110
+ T + + V GV + D T+ L +++
Sbjct: 175 VEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKM 234
Query: 111 FLKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAAHG 170
+ TL T + + + ++ V+ +D ++ + + G + + G
Sbjct: 235 AVATLASETLPLLAVTFITESSLVAAGHDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRG 294
Query: 171 D----LITSGGEDQCVCVYQNKAQNSFMIPAMSVWAVAILPNSD-----IVTGSSDGIVR 221
+ + + SV +++L T DG +
Sbjct: 295 LTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMS 354
Query: 222 VFSAN 226
++
Sbjct: 355 IWDVR 359
Score = 30.2 bits (66), Expect = 0.58
Identities = 11/83 (13%), Positives = 32/83 (38%), Gaps = 6/83 (7%)
Query: 189 AQNSFMIPAMSVWAVAILPNSD-IVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLK 247
A +SF++ + A + I ++ V ++ + ++ + ++ +V +
Sbjct: 1 AYHSFLVEP--ISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVD 58
Query: 248 -SANEQEIGGVKVSDDGIVRVFS 269
+ + I V D V++
Sbjct: 59 WAPDSNRI--VTCGTDRNAYVWT 79
Score = 27.9 bits (60), Expect = 3.1
Identities = 8/40 (20%), Positives = 11/40 (27%), Gaps = 5/40 (12%)
Query: 10 GHSMDVRSLSVTPDG-----CILSASRDKSAKLWKPNDLS 44
H V +SV G + D +W L
Sbjct: 323 LHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSLE 362
>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon
Thermoplasma acidophilum [TaxId: 2303]}
Length = 360
Score = 48.3 bits (113), Expect = 1e-06
Identities = 10/190 (5%), Positives = 41/190 (21%), Gaps = 20/190 (10%)
Query: 56 SWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKL--------HSE 107
++ +E ++ ++ + + E
Sbjct: 156 YVMQAIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFE 215
Query: 108 EGEFLKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVH-----TMYGHPNF 162
+ ++ + ++ ++ V + +
Sbjct: 216 VVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESS 275
Query: 163 IYSVAAH-----GDLITSGGEDQCVCVYQNKAQNSFMIPAMSVWAVAILPNSD-IVTGSS 216
I + E + Y K + + ++ + + + ++
Sbjct: 276 ILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKVTEVKN-NLTDLRLSADRKTVMVRKD 334
Query: 217 DGIVRVFSAN 226
DG + F
Sbjct: 335 DGKIYTFPLE 344
Score = 47.9 bits (112), Expect = 2e-06
Identities = 8/153 (5%), Positives = 31/153 (20%), Gaps = 23/153 (15%)
Query: 7 ALYGHSMDVRSLSVTPDGCILSASRDKSAKLWKPNDLSPGAKVNTLLSASWDMTAKLWCL 66
+ + P A ++ +
Sbjct: 222 VIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMY------------------KRSSPINVDP 263
Query: 67 ESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSEEGEFLKTLTGHTDCVRGL 125
+ + + + + + + + + +T + + L
Sbjct: 264 GDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKT---RKVTEVKNNLTDL 320
Query: 126 AVLND-TDFVSCSNDASIRVWDSTTGKCVHTMY 157
+ D + +D I + + T+
Sbjct: 321 RLSADRKTVMVRKDDGKIYTFPLEKPEDERTVE 353
Score = 41.0 bits (94), Expect = 3e-04
Identities = 19/313 (6%), Positives = 57/313 (18%), Gaps = 59/313 (18%)
Query: 10 GHSMDVRSLSVTPDGCILSASRDKSAKLWKPNDLSPGA--------KVNTLLSASWDMTA 61
+ +R + D + + D G + +
Sbjct: 40 PEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKF 99
Query: 62 KLWCLESQQCKLTIRQHEMAVWGVIQLANGI----------------------IVTGCAD 99
+ + + + I
Sbjct: 100 AVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQ 159
Query: 100 KTIKLHSEEGEFLKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKC------- 152
E + T ++ + + S + D
Sbjct: 160 AIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSK 219
Query: 153 VHTMYGHPNFIYSVAAHGD---------LITSGGEDQCVCVYQNKAQNSFMIPAMSVWAV 203
+ P + + + S+
Sbjct: 220 PFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIY 279
Query: 204 AILPNSD----IVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLK-SANEQEIGGVK 258
++ + + G++ + + + + L+ SA+ + + +
Sbjct: 280 SVPVHGEFAAYYQGAPEKGVLLKYD------VKTRKVTEVKNNLTDLRLSADRKTV--MV 331
Query: 259 VSDDGIVRVFSAN 271
DDG + F
Sbjct: 332 RKDDGKIYTFPLE 344
>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 337
Score = 48.3 bits (113), Expect = 1e-06
Identities = 16/160 (10%), Positives = 40/160 (25%), Gaps = 2/160 (1%)
Query: 11 HSMDVRSLSVTPDGCILSASRDKSAKLWKPNDLSPGAKVNTLLSASWDMTAKLWCLESQQ 70
PD + + S + P + ++ ++ LE+ +
Sbjct: 172 IQSWEAETYAQPDVLAVWNQHESSGVMATP-FYTARKDIDPADPTAYRTGLLTMDLETGE 230
Query: 71 CKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHSEEGEFLKTLTGHTDCVRGLAVLND 130
+ + + + A ++ E + V D
Sbjct: 231 MAMREVRIMDVFYFSTAVNPAKTRAFGAYNVLESFDLEKNASIKRVPLPHSYYSVNVSTD 290
Query: 131 TDFV-SCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAAH 169
V + +D+ T + + N S+A+
Sbjct: 291 GSTVWLGGALGDLAAYDAETLEKKGQVDLPGNASMSLASV 330
Score = 42.5 bits (98), Expect = 9e-05
Identities = 10/83 (12%), Positives = 24/83 (28%), Gaps = 5/83 (6%)
Query: 93 IVTGCADKTIKL-HSEEGEFLKTLTGHTDC--VRGLAVLND--TDFVSCSNDASIRVWDS 147
I+ + + +E+ K +T V + + + S+ D
Sbjct: 4 ILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDL 63
Query: 148 TTGKCVHTMYGHPNFIYSVAAHG 170
TG+ + + + G
Sbjct: 64 VTGETLGRIDLSTPEERVKSLFG 86
Score = 39.4 bits (90), Expect = 8e-04
Identities = 13/102 (12%), Positives = 33/102 (32%), Gaps = 4/102 (3%)
Query: 129 NDTDFVSCSNDASIRVWDSTTGKCVHT-MYGHPNFIYSVAAHGDLITSGGEDQCVCVYQN 187
+ + + D TG+ + F +S A + + G + +
Sbjct: 208 DIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGAYNVLESFDL 267
Query: 188 KAQNSFMIPAM--SVWAVAILPNSD-IVTGSSDGIVRVFSAN 226
+ S + S ++V + + + G + G + + A
Sbjct: 268 EKNASIKRVPLPHSYYSVNVSTDGSTVWLGGALGDLAAYDAE 309
>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain
{Pseudomonas putida [TaxId: 303]}
Length = 346
Score = 48.2 bits (113), Expect = 1e-06
Identities = 14/158 (8%), Positives = 39/158 (24%), Gaps = 6/158 (3%)
Query: 3 KLSTALYGHSMDVRSLSVTPDGCILSASRDKSAKLWKPNDLSPGAKVNTLLSASWDMTAK 62
K + AL + + + S + +A
Sbjct: 174 KYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYL 233
Query: 63 LWCLESQQCKLTI-RQHEMAVWGVIQLANGIIVTGCADKTIKLHS-EEGEFLKTL-TGHT 119
L++ + + ++ + + ++ + +K HT
Sbjct: 234 SVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGVLNRLAKYDLKQRKLIKAANLDHT 293
Query: 120 DCVRGLAVLNDTDFV-SCSNDASIRVWDSTTGKCVHTM 156
+A D + + V++ T + V +
Sbjct: 294 --YYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNI 329
Score = 42.0 bits (97), Expect = 1e-04
Identities = 12/113 (10%), Positives = 23/113 (20%), Gaps = 5/113 (4%)
Query: 77 QHEMAVWGVIQLANGIIVTGCADKTIKL--HSEEGEFLKTLTGHTDCVRGLAVLNDTDFV 134
+ + T + T+
Sbjct: 207 FSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQ 266
Query: 135 SCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVA--AHGDLITSGGEDQCVCVY 185
+ +D K + + Y VA GD + GG + V+
Sbjct: 267 IYGVLNRLAKYDLKQRKLIKA-ANLDHTYYCVAFDKKGDKLYLGGTFNDLAVF 318
Score = 39.3 bits (90), Expect = 8e-04
Identities = 24/293 (8%), Positives = 67/293 (22%), Gaps = 29/293 (9%)
Query: 43 LSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIR-QHEMAVWGVIQLANG--IIVTGCAD 99
L G + ++ ++ + + S + + + + V
Sbjct: 4 LKAGHEY--MIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHY 61
Query: 100 KTIKL-------HSEEGEFLKTLTGHTDCVRGLAVLNDTDFVSCSNDAS----------- 141
I ++ + A+ D V + + +
Sbjct: 62 GDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKP 121
Query: 142 --IRVWDSTTGKCVHTMYGHPN----FIYSVAAHGDLITSGGEDQCVCVYQNKAQNSFMI 195
+ V+ + G + P ++ A G L +G + + V K + +
Sbjct: 122 PRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGPDIYKMDVKTGKYTVALPL 181
Query: 196 PAMSVWAVAILPNSDIVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIG 255
+ + S R +D A+ + S + +
Sbjct: 182 RNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGK 241
Query: 256 GVKVSDDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDLP 308
+ ++ + + K + I +
Sbjct: 242 THTQEFADLTELYFTGLRSPKDPNQIYGVLNRLAKYDLKQRKLIKAANLDHTY 294
Score = 39.0 bits (89), Expect = 0.001
Identities = 14/141 (9%), Positives = 36/141 (25%), Gaps = 6/141 (4%)
Query: 124 GLAVLNDTD-FVSCSNDASIRVWDSTTGKCVHTM-YGHPNFIYSVAAHGD---LITSGGE 178
G A+ + + + ++ V D + + + D
Sbjct: 1 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNH 60
Query: 179 DQCVCVYQNKAQNSFMIPAMSVWAVAILPNSDIVTGSSDGIVRVFSANPDRQAEDAVQAQ 238
+ + +S + + S DG V++ Q +
Sbjct: 61 YGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGK-EVYATVNPTQRLNDHYVV 119
Query: 239 YAEEVKKLKSANEQEIGGVKV 259
++ +A+ E V+
Sbjct: 120 KPPRLEVFSTADGLEAKPVRT 140
Score = 37.8 bits (86), Expect = 0.003
Identities = 14/177 (7%), Positives = 36/177 (20%), Gaps = 21/177 (11%)
Query: 55 ASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHSEEGEFLKT 114
+++ + + + G + +
Sbjct: 159 YVAGPDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRH------------- 205
Query: 115 LTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCV-HTMYGHPNFIYSVAAHGD-- 171
+ D + D TGK ++
Sbjct: 206 -EFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDP 264
Query: 172 --LITSGGEDQCVCVYQNKAQNSFMIPAMSVWAVAILPNSD-IVTGSSDGIVRVFSA 225
+ + Q K + + + + VA D + G + + VF+
Sbjct: 265 NQIYGVLNRLAKYDLKQRKLIKAANLDH-TYYCVAFDKKGDKLYLGGTFNDLAVFNP 320
>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 325
Score = 47.6 bits (111), Expect = 2e-06
Identities = 17/62 (27%), Positives = 23/62 (37%), Gaps = 5/62 (8%)
Query: 129 NDTDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAA-----HGDLITSGGEDQCVC 183
+ F + DA+IRVWD TT KCV + + I S D +
Sbjct: 262 DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLN 321
Query: 184 VY 185
Y
Sbjct: 322 FY 323
Score = 46.8 bits (109), Expect = 4e-06
Identities = 11/95 (11%), Positives = 30/95 (31%), Gaps = 5/95 (5%)
Query: 57 WDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHS-EEGEFLKTL 115
+ + + ++ + L + T AD TI++ + ++
Sbjct: 230 ISCFDGKSGEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKW 289
Query: 116 TGHTDCVRGLAV----LNDTDFVSCSNDASIRVWD 146
T + V + +S S D ++ ++
Sbjct: 290 TLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYE 324
Score = 42.6 bits (98), Expect = 9e-05
Identities = 11/59 (18%), Positives = 23/59 (38%), Gaps = 4/59 (6%)
Query: 50 NTLLSASWDMTAKLWCLESQQCKLTIRQHEMAV----WGVIQLANGIIVTGCADKTIKL 104
+ D T ++W + + +C + + GV+ NG I++ D T+
Sbjct: 264 QKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNF 322
Score = 31.0 bits (68), Expect = 0.36
Identities = 20/252 (7%), Positives = 53/252 (21%), Gaps = 27/252 (10%)
Query: 44 SPGAKVNTLLSASWDMTAKLWCLESQQCKLTI--------RQHEMAVWGVIQLANGIIVT 95
SP L S +W + ++ + + + G +
Sbjct: 72 SPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLC 131
Query: 96 GCADKTIKLHSEEGEFLKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHT 155
+ G ++ S
Sbjct: 132 VVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPP 191
Query: 156 MY---------GHPNFIYSVAAHGDLITSGGEDQCVCVY----------QNKAQNSFMIP 196
+F+ V D ++
Sbjct: 192 FKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPV 251
Query: 197 AMSVWAVAILPNSDIVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGG 256
++A++ L + T +D +RV+ + + + +++
Sbjct: 252 QGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRI 311
Query: 257 VKVSDDGIVRVF 268
+ +S DG + +
Sbjct: 312 ISLSLDGTLNFY 323
Score = 28.0 bits (60), Expect = 2.9
Identities = 8/34 (23%), Positives = 16/34 (47%), Gaps = 2/34 (5%)
Query: 8 LYGHSMDVRSLSV--TPDGCILSASRDKSAKLWK 39
L + + + V T +G I+S S D + ++
Sbjct: 291 LDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYE 324
>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 355
Score = 44.4 bits (103), Expect = 2e-05
Identities = 14/154 (9%), Positives = 48/154 (31%), Gaps = 6/154 (3%)
Query: 21 TPDGCILSASRDKSAKLWKPNDLSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEM 80
G ++ + + S AK + A + ++ +
Sbjct: 204 QKAGRLVWPTYTGKIHQI--DLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALD 261
Query: 81 AVWGVIQLANGIIVTGCADKTIKLHSEEGEFLKTLTGHTDCVRGLAVLNDTD---FVSCS 137
++ ++ + + + L ++ GE L + + + V D + +
Sbjct: 262 RIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGHE-IDSINVSQDEKPLLYALST 320
Query: 138 NDASIRVWDSTTGKCVHTMYGHPNFIYSVAAHGD 171
D ++ + D+ +G+ + ++ + +
Sbjct: 321 GDKTLYIHDAESGEELRSVNQLGHGPQVITTADM 354
Score = 35.9 bits (81), Expect = 0.011
Identities = 14/92 (15%), Positives = 23/92 (25%), Gaps = 13/92 (14%)
Query: 131 TDFVSCSNDASIRVWDSTTGKCVHTMYGHP----------NFIYSVAAHGDLITSGGEDQ 180
D + V D G+ + + G +FI + I G
Sbjct: 19 NDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLPNPVVADDGSFIAHASTVFSRIARGERTD 78
Query: 181 CVCVY---QNKAQNSFMIPAMSVWAVAILPNS 209
V V+ +P + V P
Sbjct: 79 YVEVFDPVTLLPTADIELPDAPRFLVGTYPWM 110
Score = 33.6 bits (75), Expect = 0.049
Identities = 10/109 (9%), Positives = 25/109 (22%), Gaps = 3/109 (2%)
Query: 125 LAVLNDTDF--VSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAAHGDLIT-SGGEDQC 181
+A + + V+D T + + V + + + +
Sbjct: 61 IAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTL 120
Query: 182 VCVYQNKAQNSFMIPAMSVWAVAILPNSDIVTGSSDGIVRVFSANPDRQ 230
+ + A ++ +L D F D
Sbjct: 121 LFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGS 169
Score = 31.3 bits (69), Expect = 0.30
Identities = 26/282 (9%), Positives = 58/282 (20%), Gaps = 71/282 (25%)
Query: 15 VRSLSVTPDG-----------CILSASRDKSAKLWKPNDLSP--------------GAKV 49
+ + V DG I R +++ P L P G
Sbjct: 49 LPNPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYP 108
Query: 50 NTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHSEEG 109
T + + A ++ + + + A T +H +G
Sbjct: 109 WMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDG 168
Query: 110 EFLKTLTGHTDCVRGLAVL-----------------NDTDFVSCSNDASIRVWDSTTGKC 152
K G V + I D ++G
Sbjct: 169 SLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDA 228
Query: 153 --VHTMYGHPNFIYSVAAH----------------------GDLITSGGEDQCVCVY--Q 186
+ + + D + V V +
Sbjct: 229 KFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAK 288
Query: 187 NKAQNSFMIPAMSVWAVAILPNSD---IVTGSSDGIVRVFSA 225
+ + + ++ + + + D + + A
Sbjct: 289 TGERLAKFEMGHEIDSINVSQDEKPLLYALSTGDKTLYIHDA 330
>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon
Methanosarcina mazei [TaxId: 2209]}
Length = 301
Score = 43.7 bits (101), Expect = 3e-05
Identities = 21/120 (17%), Positives = 37/120 (30%), Gaps = 9/120 (7%)
Query: 57 WDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHSEEGEFLKTLT 116
+ + K+ +AV A V + + + + +
Sbjct: 182 ISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIP 241
Query: 117 GHTDCVRGLAVLNDTD--FVSCSNDASIRVWDSTTGKCVHTM------YGHPNFIYSVAA 168
D G+AV D +V+ S ++ V D+ T TM Y FI S+
Sbjct: 242 VGPD-PAGIAVTPDGKKVYVALSFCNTVSVIDTATNTITATMAVGKNPYASGQFIGSIPV 300
Score = 40.2 bits (92), Expect = 5e-04
Identities = 10/56 (17%), Positives = 19/56 (33%), Gaps = 4/56 (7%)
Query: 133 FVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAAHGD---LITSGGEDQCVCVY 185
+++ S +I V D T+ K T+ N D + + V +
Sbjct: 5 YIANSESDNISVIDVTSNKVTATIPVGSN-PMGAVISPDGTKVYVANAHSNDVSII 59
Score = 39.1 bits (89), Expect = 0.001
Identities = 8/111 (7%), Positives = 31/111 (27%), Gaps = 4/111 (3%)
Query: 94 VTGCADKTIKL-HSEEGEFLKTLTGHTDCVRGLAVLNDTD--FVSCSNDASIRVWDSTTG 150
+ I + + T+ ++ G + D +V+ ++ + + D+ T
Sbjct: 6 IANSESDNISVIDVTSNKVTATIPVGSN-PMGAVISPDGTKVYVANAHSNDVSIIDTATN 64
Query: 151 KCVHTMYGHPNFIYSVAAHGDLITSGGEDQCVCVYQNKAQNSFMIPAMSVW 201
+ T+ + + + ++ + +
Sbjct: 65 NVIATVPAGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTG 115
Score = 27.1 bits (58), Expect = 5.5
Identities = 18/242 (7%), Positives = 54/242 (22%), Gaps = 29/242 (11%)
Query: 14 DVRSLSVTPDGCIL--SASRDKSAKLWKPNDLSPGAKVNTLLSASWDMTAKLWCLESQQC 71
+ ++PDG + + + + + A V S +
Sbjct: 33 NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSSPQGVAVSPDGKQVYVTN 92
Query: 72 KLTIRQHEM--------AVWGVIQLANGIIVTGCADKTIKLHSEEGEFLKTLTGHTDCVR 123
+ + + G+ ++ K ++ + T +
Sbjct: 93 MASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVIN 152
Query: 124 GLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAAHGDLITSGGEDQCVC 183
++V ++ + D + + + + N + + +
Sbjct: 153 TVSVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGT 212
Query: 184 VYQNKAQNSFMIPAM-----------------SVWAVAILPNSD--IVTGSSDGIVRVFS 224
+ + +A+ P+ V S V V
Sbjct: 213 KAYVTNVDKYFNTVSMIDTGTNKITARIPVGPDPAGIAVTPDGKKVYVALSFCNTVSVID 272
Query: 225 AN 226
Sbjct: 273 TA 274
>gi|206564140|ref|YP_002234903.1|(51-382:385) putative amine
dehydrogenase [Burkholderia cenocepacia J2315]
gi|198040180|emb|CAR56163.1| putative amine
dehydrogenase [Burkholderia cenocepacia J2315]
gi|194561004|ref|YP_002096029.1| hypothetical protein
BCPG_04901 [Burkholderia cenocepacia PC184]
gi|124876520|gb|EAY66510.1| hypothetical protein
BCPG_04901 [Burkholderia cenocepacia PC184]
gi|170737581|ref|YP_001778841.1| amine dehydrogenase
[Burkholderia cenocepacia MC0-3]
gi|169819769|gb|ACA94351.1| Amine dehydrogenase
[Burkholderia cenocepacia MC0-3]
gi|78061451|ref|YP_371359.1| amine dehydrogenase
[Burkholderia sp. 383] gi|77969336|gb|ABB10715.1|
Amine dehydrogenase [Burkholderia sp. 383]
gi|107025662|ref|YP_623173.1| amine dehydrogenase
[Burkholderia cenocepacia AU 1054]
gi|116693156|ref|YP_838689.1| amine dehydrogenase
[Burkholderia cenocepacia HI2424]
gi|105895036|gb|ABF78200.1| Amine dehydrogenase
[Burkholderia cenocepacia AU 1054]
gi|116651156|gb|ABK11796.1| Amine dehydrogenase
[Burkholderia cenocepacia HI2424] E=8e-14 s/c=0.25
id=29% cov=82%
Length = 321
Score = 39.2 bits (90), Expect = 0.001
Identities = 29/205 (14%), Positives = 53/205 (25%), Gaps = 22/205 (10%)
Query: 143 RVWDSTTGKCVHTMYGHP----------NFIYSVAAHGDLITSGGEDQCVCVY---QNKA 189
V+D+ K + + G + + G V +
Sbjct: 1 YVYDADAKKLLGQIDGGFGPGFAIAPDRKASVVATTYFSRGSHGTRTDVVEIIDNTTLDH 60
Query: 190 QNSFMIPAMSVWAVAILPNSDIVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSA 249
+IPA V P+ S+DG ++ AN A + V K +
Sbjct: 61 AGEIVIPAKHAQHV---PSPYNTAFSADGKR-LYVANITP----AASVTVIDAVSKKMLS 112
Query: 250 NEQEIGGVKVSDDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDLPG 309
V G R + +A +E K+ S ++
Sbjct: 113 EIDTAACVLAYPAGDDRFTALCESGKALTVTLDANGKEAKRTMSDAFIDVDKDPAFVNAS 172
Query: 310 K-EVLYEPGKADGDVKMVREGSTVV 333
+ + Y G+V+
Sbjct: 173 RYKGDYLFTTYGGNVRSADFSGDKP 197
Score = 36.5 bits (83), Expect = 0.007
Identities = 24/193 (12%), Positives = 50/193 (25%), Gaps = 27/193 (13%)
Query: 107 EEGEFLKTLTGHTDCVRGLAVLND-----------TDFVSCSNDASIRVWDSTTGKCVHT 155
+ + L + G G A+ D + + + + D+TT
Sbjct: 6 DAKKLLGQIDGGF--GPGFAIAPDRKASVVATTYFSRGSHGTRTDVVEIIDNTTLDHAGE 63
Query: 156 MYGHPNFIYSVAA--------HGDLITSGGEDQCVCVYQ-NKAQNSFMIPAMSVWAVAIL 206
+ V + G + V + + + V
Sbjct: 64 IVIPAKHAQHVPSPYNTAFSADGKRLYVANITPAASVTVIDAVSKKMLSEIDTAACVLAY 123
Query: 207 PNSD--IVTGSSDGI-VRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGG--VKVSD 261
P D G + V ++A+ + + + K N G + +
Sbjct: 124 PAGDDRFTALCESGKALTVTLDANGKEAKRTMSDAFIDVDKDPAFVNASRYKGDYLFTTY 183
Query: 262 DGIVRVFSANPDR 274
G VR + D+
Sbjct: 184 GGNVRSADFSGDK 196
Score = 33.4 bits (75), Expect = 0.064
Identities = 21/179 (11%), Positives = 44/179 (24%), Gaps = 24/179 (13%)
Query: 3 KLSTALYGHSMDVRSLSVTPD---GCILSASRDKSAKLWKPNDLSPGAKVNTLLSASWDM 59
K + + +D V G L + + + + P +
Sbjct: 152 KRTMSDAFIDVDKDPAFVNASRYKGDYLFTTYGGNVRSADFSGDKPAF-GKPWSLLTDAE 210
Query: 60 TAKLWCLESQQCKLTIRQHEMAVWGVIQLANG--------IIVTGCADKTIKLHS-EEGE 110
A+ W Q + + + +G + V K +
Sbjct: 211 RAEGWRPGGMQQTAVQAKQNRYYVLMHKGTDGSHKDPGTQVWVYDLKSKQRVARWDLAQQ 270
Query: 111 FLKTLTGHTDCVRGLAVLNDTD---FVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSV 166
++ L + V D + + + V D+ TG H N +
Sbjct: 271 KVEPLVS-------IQVSEDDKPLFYGLTATSDLV-VMDARTGALQHVEKQIGNTSSLL 321
>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli
[TaxId: 562]}
Length = 333
Score = 38.3 bits (87), Expect = 0.002
Identities = 10/81 (12%), Positives = 22/81 (27%), Gaps = 5/81 (6%)
Query: 92 IIVTGCADKTIK---LHSEEGEFLKTLTGHTDCVRGLAVLND--TDFVSCSNDASIRVWD 146
+ + + I L+ E L + V+ + V D +V + + +
Sbjct: 6 VYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYR 65
Query: 147 STTGKCVHTMYGHPNFIYSVA 167
T S+
Sbjct: 66 IAPDDGALTFAAESALPGSLT 86
Score = 27.5 bits (59), Expect = 4.0
Identities = 11/107 (10%), Positives = 22/107 (20%), Gaps = 8/107 (7%)
Query: 57 WDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHS-EEGEFLKTL 115
+ + A + + I + S E + +
Sbjct: 209 PHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSK 268
Query: 116 TGHT---DCVRGLAVLNDTDF--VSCSNDASIRVW--DSTTGKCVHT 155
G RG V + + + I V+ G
Sbjct: 269 EGFQPTETQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEK 315
>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of
cytochrome cd1-nitrite reductase {Paracoccus
denitrificans [TaxId: 266]}
Length = 432
Score = 37.5 bits (86), Expect = 0.004
Identities = 12/155 (7%), Positives = 37/155 (23%), Gaps = 15/155 (9%)
Query: 133 FVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAAH--GDLITSGGEDQCVCVYQNKAQ 190
V+ + I + D +T + + ++ G + G D V + +
Sbjct: 35 SVTLRDAGQIALIDGSTYEIKTVLDTG-YAVHISRLSASGRYLFVIGRDGKVNMIDLWMK 93
Query: 191 NSFMI--------PAMSVWAVAILPNSD--IVTGSSDGIVRVFSANPDRQAEDAVQAQYA 240
+ + I + + + +Q+
Sbjct: 94 EPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIM--DGETLEPKKIQSTRG 151
Query: 241 EEVKKLKSANEQEIGGVKVSDDGIVRVFSANPDRQ 275
+ + E + + S + + +
Sbjct: 152 MTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGK 186
>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of
cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa
[TaxId: 287]}
Length = 426
Score = 36.1 bits (82), Expect = 0.009
Identities = 12/153 (7%), Positives = 37/153 (24%), Gaps = 11/153 (7%)
Query: 133 FVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAAH--GDLITSGGEDQCVCVYQNKAQ 190
V+ + I + D + K V + ++ G + G D + + A+
Sbjct: 35 SVTLRDAGQIALVDGDSKKIVKVIDTG-YAVHISRMSASGRYLLVIGRDARIDMIDLWAK 93
Query: 191 NSFMI--------PAMSVWAVAILPNSDIVTGSSDGIVRVFSANPDRQAEDAVQAQYAEE 242
+ + + + + + + +
Sbjct: 94 EPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMT 153
Query: 243 VKKLKSANEQEIGGVKVSDDGIVRVFSANPDRQ 275
V E + + S + + + +
Sbjct: 154 VDTQTYHPEPRVAAIIASHEHPEFIVNVKETGK 186
Score = 29.2 bits (64), Expect = 1.4
Identities = 12/91 (13%), Positives = 25/91 (27%), Gaps = 11/91 (12%)
Query: 78 HEMAVWGVIQLANGII-VTGCADKTIKLHSEEGEFLKTLTGHTDCVRGLAVLNDTDFVSC 136
VW L +G I + G K ++ + + L G + + +
Sbjct: 263 KYGPVWSTSHLGDGSISLIGTDPKNHPQYA--WKKVAELQGQGGGSLFIKTHPKSSHLYV 320
Query: 137 SN--------DASIRVWDSTTGKCVHTMYGH 159
S+ V+D + +
Sbjct: 321 DTTFNPDARISQSVAVFDLKNLDAKYQVLPI 351
>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 368
Score = 33.4 bits (75), Expect = 0.067
Identities = 8/108 (7%), Positives = 27/108 (25%), Gaps = 2/108 (1%)
Query: 123 RGLAVLND--TDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAAHGDLITSGGEDQ 180
A+ + + V+D T + + +SV +I +
Sbjct: 77 SDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSA 136
Query: 181 CVCVYQNKAQNSFMIPAMSVWAVAILPNSDIVTGSSDGIVRVFSANPD 228
C+ + + + + + ++ + +
Sbjct: 137 CLLFFLFGSSAAAGLSVPGASDDQLTKSASCFHIHPGAAATHYLGSCP 184
Score = 33.4 bits (75), Expect = 0.069
Identities = 9/160 (5%), Positives = 44/160 (27%), Gaps = 10/160 (6%)
Query: 1 MYKLSTALYGHSMDVRSLSVTPDGCILSASRDKSAKLWKPNDLSPGAKVNTLLSASWDMT 60
+ + ++ G ++ A + + + + GA + + +
Sbjct: 200 GIVGAQCTGAQNCSSQAAQANYPGMLVWAVASS---ILQGDIPAAGATMKAAIDGNESGR 256
Query: 61 AKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHS-EEGEFLKTLTGHT 119
+ + ++ + I A + + G+ ++
Sbjct: 257 KADNFRSAGFQMVAKLKNTDGIM--ILTVEHSRSCLAAAENTSSVTASVGQTSGPISNG- 313
Query: 120 DCVRGLAVLNDTD---FVSCSNDASIRVWDSTTGKCVHTM 156
+ D + + + + ++D+ + + ++
Sbjct: 314 HDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSV 353
>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila
melanogaster) [TaxId: 7227]}
Length = 279
Score = 31.2 bits (69), Expect = 0.28
Identities = 7/37 (18%), Positives = 17/37 (45%)
Query: 10 GHSMDVRSLSVTPDGCILSASRDKSAKLWKPNDLSPG 46
+++ DG ++ AS+D +++ L+P
Sbjct: 241 VKHAQCFDVALMDDGSVVLASKDYRLYIYRYVQLAPV 277
Score = 29.2 bits (64), Expect = 1.1
Identities = 21/179 (11%), Positives = 49/179 (27%), Gaps = 11/179 (6%)
Query: 56 SWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHSEEGEFLKTL 115
K + + IIV C + + + G L
Sbjct: 91 PTHQIQIYNQYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGNVLHKF 150
Query: 116 TGHTD--CVRGLAVLNDTDFVSCSNDASIRVWDSTTGK-----CVHTMYGHPNFIYSVAA 168
G+ V + + N A + G+ + +P + +
Sbjct: 151 GCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQYLRQIGGEGITNYPIGVGINSN 210
Query: 169 HGDLITSGGEDQCVCVYQNKAQNSFMIPA----MSVWAVAILPNSDIVTGSSDGIVRVF 223
LI + + ++ Q + + + VA++ + +V S D + ++
Sbjct: 211 GEILIADNHNNFNLTIFTQDGQLISALESKVKHAQCFDVALMDDGSVVLASKDYRLYIY 269
>d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]}
Length = 263
Score = 29.5 bits (65), Expect = 0.92
Identities = 9/116 (7%), Positives = 22/116 (18%), Gaps = 10/116 (8%)
Query: 44 SPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIK 103
K+ T + LT + +
Sbjct: 143 RDNPKIETSHMDGTNRRILAQDNLGLPNGLTFDAFSSQLC----------WVDAGTHRAE 192
Query: 104 LHSEEGEFLKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMYGH 159
+ + + + + + S+ D K + T + H
Sbjct: 193 CLNPAQPGRRKVLEGLQYPFAVTSYGKNLYYTDWKTNSVIAMDLAISKEMDTFHPH 248
>d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor
{Human (Homo sapiens) [TaxId: 9606]}
Length = 266
Score = 28.0 bits (61), Expect = 2.8
Identities = 9/46 (19%), Positives = 17/46 (36%)
Query: 124 GLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAAH 169
LAV D F + + +I + TG V+ + + +
Sbjct: 213 SLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLAENLLSPEDMVLF 258
>d1gr0a1 c.2.1.3 (A:14-200,A:312-367) Myo-inositol 1-phosphate
synthase {Mycobacterium tuberculosis [TaxId: 1773]}
Length = 243
Score = 27.8 bits (62), Expect = 3.2
Identities = 18/101 (17%), Positives = 33/101 (32%), Gaps = 13/101 (12%)
Query: 253 EIGGVKVSDDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDLPGKEV 312
G V D V F + + D A +A E +K++D+ V
Sbjct: 40 RFGPYHVRDVKFVAAFDVDAKKVGFDLSDAIFASEN-----------NTIKIADVAPTNV 88
Query: 313 LYEPGKA-DGDVKMVREGSTVVAYSWSEASREWNKLG-DVM 351
+ + G DG K + + + + + DV+
Sbjct: 89 IVQRGPTLDGIGKYYADTIELSDAEPVDVVQALKEAKVDVL 129
>g1qhh.1 c.37.1.19 (A:,B:,C:,D:) DEXX box DNA helicase {Bacillus
stearothermophilus, PcrA [TaxId: 1422]}
Length = 623
Score = 27.6 bits (60), Expect = 4.2
Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 8/42 (19%)
Query: 413 FLEQVANF------IMTNSKSKQGPTEYDFVFSVDIEEGKPP 448
FL +A +MT +K G E+ VF + +EEG P
Sbjct: 519 FLTDLALISGDAVMLMTLHAAK-G-LEFPVVFLIGMEEGIFP 558
>d1q67a_ b.55.1.7 (A:) Dcp1 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 207
Score = 26.7 bits (58), Expect = 5.7
Identities = 7/19 (36%), Positives = 7/19 (36%)
Query: 330 STVVAYSWSEASREWNKLG 348
Y W EWNKL
Sbjct: 21 PHASLYKWDFKKDEWNKLE 39
>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase
{Thermobifida fusca [TaxId: 2021]}
Length = 298
Score = 26.7 bits (58), Expect = 6.9
Identities = 8/51 (15%), Positives = 20/51 (39%), Gaps = 1/51 (1%)
Query: 36 KLWKPNDLSPGAKVNT-LLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGV 85
+ DL G +T + +A++D W +++ ++ + G
Sbjct: 93 FVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNHGDRIRARYLIMASGQ 143
>d1d8ia_ d.63.1.1 (A:) mRNA triphosphatase CET1 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 301
Score = 26.3 bits (58), Expect = 9.8
Identities = 18/85 (21%), Positives = 36/85 (42%), Gaps = 10/85 (11%)
Query: 364 VLYQGKEYDFVFSVDIEEGKPPLKLPYNVSEDPWHAAQ-----AFIHTHHLSQMFLEQVA 418
+ YD S+++E P P + + ++IH +++ + +V
Sbjct: 179 LYSPKDSYDVKISLNLELPVPDNDPPEKYKSQSPISERTKDRVSYIHNDSCTRIDITKVE 238
Query: 419 NFIMTNSKSKQGPTEYDFVFSVDIE 443
N NSKS+Q T ++ V++E
Sbjct: 239 NH-NQNSKSRQSETTHE----VELE 258
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.315 0.130 0.393
Gapped
Lambda K H
0.267 0.0443 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 2,068,878
Number of extensions: 95290
Number of successful extensions: 667
Number of sequences better than 10.0: 1
Number of HSP's gapped: 489
Number of HSP's successfully gapped: 137
Length of query: 557
Length of database: 2,407,596
Length adjustment: 90
Effective length of query: 467
Effective length of database: 1,171,896
Effective search space: 547275432
Effective search space used: 547275432
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.7 bits)