Query psy7058
Match_columns 85
No_of_seqs 146 out of 1505
Neff 12.4
Searched_HMMs 46136
Date Fri Aug 16 17:02:37 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7058.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/7058hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0263|consensus 99.9 1.9E-21 4.2E-26 108.0 8.9 82 2-84 548-629 (707)
2 KOG0271|consensus 99.9 1.5E-21 3.2E-26 102.6 7.7 84 1-85 127-211 (480)
3 KOG0272|consensus 99.8 1.4E-20 3E-25 99.5 6.8 83 1-84 315-397 (459)
4 KOG0295|consensus 99.8 1.4E-19 2.9E-24 94.5 9.7 83 1-84 304-386 (406)
5 KOG0272|consensus 99.8 5.4E-21 1.2E-25 101.0 4.2 84 1-85 273-356 (459)
6 KOG0302|consensus 99.8 1.1E-19 2.5E-24 95.3 8.8 83 2-85 271-358 (440)
7 KOG0279|consensus 99.8 1.4E-19 3E-24 91.9 8.4 82 2-85 163-244 (315)
8 KOG0266|consensus 99.8 4.8E-19 1E-23 96.9 10.5 83 1-84 215-298 (456)
9 KOG0286|consensus 99.8 1.6E-18 3.5E-23 88.6 8.8 83 2-85 157-240 (343)
10 KOG0284|consensus 99.8 2.9E-19 6.2E-24 94.5 5.6 82 2-84 235-316 (464)
11 KOG0271|consensus 99.8 1.5E-18 3.3E-23 91.5 7.9 84 1-85 379-462 (480)
12 KOG0264|consensus 99.8 4E-18 8.8E-23 90.5 8.2 83 2-85 241-327 (422)
13 KOG0266|consensus 99.8 1.7E-17 3.7E-22 90.9 10.7 84 1-85 258-345 (456)
14 PTZ00421 coronin; Provisional 99.8 2.6E-17 5.6E-22 90.8 11.2 83 2-85 89-179 (493)
15 KOG0284|consensus 99.8 3.8E-18 8.2E-23 90.3 7.4 83 2-85 193-275 (464)
16 KOG0316|consensus 99.8 7.9E-18 1.7E-22 84.3 7.7 83 1-84 29-111 (307)
17 KOG0263|consensus 99.8 3.4E-18 7.5E-23 95.4 6.5 84 1-85 505-588 (707)
18 KOG1273|consensus 99.7 1.2E-17 2.6E-22 86.5 7.1 82 1-84 35-116 (405)
19 KOG0279|consensus 99.7 9.6E-17 2.1E-21 81.8 9.2 84 1-85 75-159 (315)
20 KOG0277|consensus 99.7 8.9E-17 1.9E-21 81.2 8.5 84 1-85 160-245 (311)
21 PTZ00421 coronin; Provisional 99.7 2.2E-16 4.8E-21 87.1 10.9 74 2-76 139-212 (493)
22 KOG0286|consensus 99.7 7.5E-17 1.6E-21 82.7 8.3 83 1-84 199-283 (343)
23 KOG0273|consensus 99.7 9.6E-17 2.1E-21 86.3 8.2 84 1-85 371-463 (524)
24 KOG0283|consensus 99.7 1.2E-16 2.5E-21 89.8 8.1 81 2-85 381-462 (712)
25 KOG2394|consensus 99.7 5.7E-17 1.2E-21 88.5 6.4 84 1-85 302-385 (636)
26 KOG0285|consensus 99.7 2E-16 4.3E-21 83.2 8.2 82 2-84 164-245 (460)
27 KOG0315|consensus 99.7 5.1E-16 1.1E-20 78.4 9.2 83 1-84 227-310 (311)
28 KOG0281|consensus 99.7 3.3E-17 7.2E-22 86.0 5.1 80 2-84 331-410 (499)
29 KOG0285|consensus 99.7 3E-16 6.5E-21 82.5 8.4 82 2-84 248-329 (460)
30 KOG0273|consensus 99.7 4.1E-16 8.9E-21 84.0 9.0 81 2-84 423-503 (524)
31 KOG0319|consensus 99.7 3.3E-16 7.1E-21 87.7 8.5 82 2-84 518-599 (775)
32 KOG0319|consensus 99.7 5.4E-16 1.2E-20 86.9 9.0 81 2-83 476-556 (775)
33 KOG0645|consensus 99.7 1.2E-15 2.6E-20 77.6 9.4 85 1-85 27-116 (312)
34 KOG0275|consensus 99.7 4.8E-17 1E-21 85.0 4.3 84 1-84 225-316 (508)
35 PTZ00420 coronin; Provisional 99.7 2.7E-15 5.8E-20 83.9 11.0 82 2-85 88-178 (568)
36 KOG0291|consensus 99.7 1.1E-15 2.3E-20 86.2 9.4 61 1-62 362-422 (893)
37 KOG0315|consensus 99.7 1.4E-15 3.1E-20 76.8 8.7 54 31-85 82-135 (311)
38 KOG0295|consensus 99.7 1.5E-15 3.2E-20 79.8 8.5 83 1-84 205-287 (406)
39 KOG0294|consensus 99.7 9.2E-16 2E-20 79.4 7.6 84 1-85 53-138 (362)
40 KOG0275|consensus 99.7 4.1E-17 8.8E-22 85.2 2.5 83 2-84 276-358 (508)
41 KOG0308|consensus 99.7 2E-15 4.3E-20 84.0 8.8 82 2-84 184-265 (735)
42 KOG0276|consensus 99.7 8.1E-16 1.8E-20 85.4 7.2 83 2-85 154-238 (794)
43 KOG0282|consensus 99.7 1.4E-15 2.9E-20 82.0 7.7 82 1-84 270-352 (503)
44 KOG0282|consensus 99.7 1.9E-16 4.1E-21 85.2 4.3 83 1-85 227-310 (503)
45 KOG0291|consensus 99.7 3.2E-15 6.9E-20 84.4 9.1 83 1-84 319-402 (893)
46 KOG0318|consensus 99.6 4.1E-15 9E-20 81.2 9.2 82 3-85 162-246 (603)
47 KOG0269|consensus 99.6 1.1E-15 2.4E-20 86.1 7.1 83 2-85 147-231 (839)
48 KOG0276|consensus 99.6 4.9E-15 1.1E-19 82.4 9.4 83 2-85 68-151 (794)
49 PLN00181 protein SPA1-RELATED; 99.6 1.5E-14 3.3E-19 83.7 11.4 81 2-84 546-627 (793)
50 PTZ00420 coronin; Provisional 99.6 1.4E-14 3E-19 81.1 10.7 74 3-78 140-213 (568)
51 KOG0313|consensus 99.6 4.6E-15 1E-19 78.3 7.4 82 2-84 313-399 (423)
52 KOG0316|consensus 99.6 9.7E-15 2.1E-19 73.5 8.1 81 2-83 72-154 (307)
53 KOG0281|consensus 99.6 1.5E-15 3.2E-20 80.0 5.4 80 2-84 208-287 (499)
54 KOG0277|consensus 99.6 1.6E-14 3.5E-19 73.2 8.8 83 2-85 118-201 (311)
55 KOG1407|consensus 99.6 3.5E-15 7.6E-20 75.8 6.4 83 1-85 201-283 (313)
56 KOG0289|consensus 99.6 2.8E-14 6E-19 76.6 10.0 85 1-85 315-400 (506)
57 KOG0265|consensus 99.6 6.8E-15 1.5E-19 75.8 7.2 82 2-85 146-227 (338)
58 KOG0264|consensus 99.6 7.3E-15 1.6E-19 78.5 7.5 83 2-85 286-384 (422)
59 KOG0265|consensus 99.6 1.6E-14 3.5E-19 74.4 8.4 80 1-81 59-139 (338)
60 KOG0288|consensus 99.6 1.7E-14 3.6E-19 76.9 8.7 84 1-84 353-441 (459)
61 KOG0641|consensus 99.6 2E-14 4.4E-19 72.3 8.5 84 2-85 195-284 (350)
62 KOG0647|consensus 99.6 1.5E-14 3.2E-19 74.7 8.0 82 2-84 41-123 (347)
63 KOG0645|consensus 99.6 5.8E-14 1.2E-18 71.7 9.9 83 1-84 73-160 (312)
64 KOG0643|consensus 99.6 6.5E-15 1.4E-19 75.1 6.3 83 1-84 159-241 (327)
65 KOG0643|consensus 99.6 4.3E-14 9.3E-19 72.2 9.1 82 1-84 22-103 (327)
66 cd00200 WD40 WD40 domain, foun 99.6 1.1E-13 2.4E-18 70.6 10.5 83 1-84 21-103 (289)
67 KOG1332|consensus 99.6 4.4E-14 9.6E-19 71.4 8.5 84 1-85 23-113 (299)
68 cd00200 WD40 WD40 domain, foun 99.6 1.7E-13 3.7E-18 70.0 10.8 82 2-84 64-145 (289)
69 KOG0283|consensus 99.6 7E-15 1.5E-19 82.9 5.4 52 31-84 368-419 (712)
70 KOG0269|consensus 99.6 1.8E-14 3.9E-19 81.4 7.0 84 1-84 189-273 (839)
71 KOG0292|consensus 99.6 2.6E-14 5.6E-19 82.3 7.7 82 2-84 64-145 (1202)
72 KOG0296|consensus 99.6 2.3E-14 5E-19 75.4 6.4 80 3-85 300-379 (399)
73 KOG0293|consensus 99.6 9.3E-15 2E-19 78.2 4.9 61 2-63 453-514 (519)
74 KOG0289|consensus 99.6 8.3E-14 1.8E-18 74.8 8.3 83 1-84 359-442 (506)
75 PLN00181 protein SPA1-RELATED; 99.6 3.6E-13 7.9E-18 78.1 11.4 82 1-84 588-671 (793)
76 KOG0305|consensus 99.5 2.1E-14 4.7E-19 78.6 6.0 84 2-85 271-354 (484)
77 KOG0270|consensus 99.5 1.4E-13 2.9E-18 73.9 8.5 82 2-84 257-339 (463)
78 KOG0318|consensus 99.5 1.4E-13 3.1E-18 75.4 8.6 71 1-71 202-274 (603)
79 KOG0274|consensus 99.5 2.2E-13 4.7E-18 76.1 9.4 79 3-84 303-381 (537)
80 KOG1007|consensus 99.5 6.5E-14 1.4E-18 72.3 6.7 83 2-85 185-269 (370)
81 KOG0292|consensus 99.5 3E-14 6.4E-19 82.0 6.0 82 2-84 22-103 (1202)
82 KOG0274|consensus 99.5 2.8E-13 6.1E-18 75.7 9.6 80 1-83 261-340 (537)
83 KOG0639|consensus 99.5 2E-14 4.4E-19 78.6 5.0 81 2-84 522-602 (705)
84 KOG0310|consensus 99.5 3.9E-14 8.4E-19 76.5 5.7 83 1-84 80-163 (487)
85 KOG1539|consensus 99.5 3.7E-14 7.9E-19 80.8 5.2 81 3-85 548-628 (910)
86 KOG0267|consensus 99.5 4.5E-14 9.7E-19 79.5 5.3 84 1-85 124-207 (825)
87 KOG0296|consensus 99.5 5.9E-13 1.3E-17 70.2 9.0 82 2-84 77-158 (399)
88 KOG0278|consensus 99.5 5.2E-13 1.1E-17 68.0 8.5 83 3-85 157-278 (334)
89 KOG0303|consensus 99.5 1E-13 2.2E-18 73.8 6.2 71 2-74 145-215 (472)
90 KOG0306|consensus 99.5 4.7E-13 1E-17 75.9 8.9 83 1-84 520-602 (888)
91 KOG0293|consensus 99.5 2E-13 4.3E-18 73.2 6.7 85 1-85 407-493 (519)
92 KOG0278|consensus 99.5 4E-13 8.6E-18 68.4 7.4 66 2-67 237-302 (334)
93 KOG0310|consensus 99.5 9.6E-13 2.1E-17 71.3 9.2 81 2-84 124-206 (487)
94 KOG1034|consensus 99.5 2.4E-13 5.3E-18 71.0 6.6 82 2-84 106-191 (385)
95 KOG0294|consensus 99.5 6.1E-13 1.3E-17 69.2 7.9 80 3-84 99-178 (362)
96 KOG0267|consensus 99.5 2.4E-14 5.3E-19 80.6 2.9 82 3-85 84-165 (825)
97 KOG1446|consensus 99.5 1.3E-12 2.7E-17 67.7 8.8 85 1-85 199-286 (311)
98 KOG0644|consensus 99.5 2.5E-14 5.5E-19 81.9 2.8 83 1-84 202-284 (1113)
99 KOG0646|consensus 99.5 1.1E-12 2.3E-17 70.9 8.3 52 34-85 279-330 (476)
100 KOG0305|consensus 99.5 1.1E-12 2.5E-17 72.1 8.2 83 1-85 313-398 (484)
101 KOG0973|consensus 99.5 7.4E-13 1.6E-17 76.8 7.8 83 1-84 81-181 (942)
102 KOG0772|consensus 99.5 5.8E-13 1.3E-17 73.1 7.0 83 2-84 282-374 (641)
103 KOG0306|consensus 99.5 5.6E-13 1.2E-17 75.6 6.9 83 2-85 563-645 (888)
104 KOG1407|consensus 99.5 1.3E-12 2.7E-17 66.7 7.5 80 4-84 162-241 (313)
105 KOG0313|consensus 99.5 4.3E-13 9.4E-18 71.1 6.0 80 3-84 273-355 (423)
106 KOG2110|consensus 99.4 3.3E-12 7.1E-17 67.6 9.1 76 9-85 151-229 (391)
107 KOG0270|consensus 99.4 2.7E-13 5.8E-18 72.9 5.2 85 1-85 192-297 (463)
108 KOG0646|consensus 99.4 8.5E-13 1.8E-17 71.3 7.0 82 1-83 93-183 (476)
109 KOG1408|consensus 99.4 3.1E-12 6.7E-17 72.9 9.3 83 2-84 609-693 (1080)
110 KOG1034|consensus 99.4 1.5E-12 3.2E-17 68.2 7.5 62 2-63 149-212 (385)
111 KOG1445|consensus 99.4 2.2E-13 4.8E-18 76.6 4.8 83 2-85 641-731 (1012)
112 KOG0647|consensus 99.4 1.8E-12 3.8E-17 67.2 7.6 69 1-71 84-154 (347)
113 KOG0300|consensus 99.4 7.9E-13 1.7E-17 69.4 6.4 82 1-83 284-366 (481)
114 KOG0322|consensus 99.4 2.4E-12 5.2E-17 65.9 7.8 52 34-85 253-304 (323)
115 KOG0290|consensus 99.4 4.3E-12 9.2E-17 65.8 8.5 62 2-63 164-228 (364)
116 KOG0268|consensus 99.4 4.7E-13 1E-17 70.8 4.7 80 3-84 202-282 (433)
117 KOG0772|consensus 99.4 6E-13 1.3E-17 73.1 4.9 84 1-84 329-419 (641)
118 KOG0299|consensus 99.4 1.5E-12 3.2E-17 70.4 6.1 80 1-81 214-293 (479)
119 KOG0641|consensus 99.4 1.4E-11 3.1E-16 62.2 9.0 84 1-85 243-330 (350)
120 KOG1007|consensus 99.4 7.8E-12 1.7E-16 64.8 8.1 81 3-84 229-340 (370)
121 KOG4283|consensus 99.4 6.8E-12 1.5E-16 65.3 7.7 81 3-85 116-199 (397)
122 KOG0649|consensus 99.4 6.6E-12 1.4E-16 63.8 7.5 68 3-71 128-195 (325)
123 KOG0639|consensus 99.4 1.5E-12 3.2E-17 71.6 5.5 84 1-84 477-561 (705)
124 KOG0299|consensus 99.4 1E-11 2.2E-16 67.2 7.7 82 2-83 155-253 (479)
125 KOG0640|consensus 99.4 1.9E-11 4E-16 64.1 8.5 84 1-84 228-315 (430)
126 PF00400 WD40: WD domain, G-be 99.4 1.7E-11 3.7E-16 46.2 6.4 38 22-60 2-39 (39)
127 KOG0302|consensus 99.4 7E-12 1.5E-16 66.7 6.8 59 3-62 316-378 (440)
128 KOG0303|consensus 99.4 6.1E-12 1.3E-16 67.3 6.5 81 2-84 95-183 (472)
129 KOG2055|consensus 99.3 2.5E-11 5.5E-16 65.9 8.7 85 1-85 356-446 (514)
130 KOG2096|consensus 99.3 1.3E-11 2.8E-16 64.8 7.4 82 2-85 200-289 (420)
131 KOG4283|consensus 99.3 3E-11 6.6E-16 62.9 8.6 80 3-83 160-255 (397)
132 KOG2111|consensus 99.3 3.1E-11 6.8E-16 63.0 8.5 79 6-85 154-237 (346)
133 KOG2111|consensus 99.3 3.9E-11 8.4E-16 62.7 8.6 64 1-64 193-258 (346)
134 KOG1332|consensus 99.3 1.2E-11 2.5E-16 62.9 6.5 84 1-84 70-159 (299)
135 KOG1445|consensus 99.3 1.6E-12 3.6E-17 73.2 3.8 63 2-65 691-753 (1012)
136 KOG0308|consensus 99.3 1.8E-11 3.9E-16 68.8 7.7 83 2-84 131-223 (735)
137 KOG2445|consensus 99.3 8.3E-11 1.8E-15 61.4 9.4 83 1-84 25-122 (361)
138 KOG1408|consensus 99.3 1.8E-11 4E-16 69.9 7.4 80 4-83 395-510 (1080)
139 KOG1188|consensus 99.3 2.8E-11 6.1E-16 63.7 7.4 84 2-85 85-176 (376)
140 KOG0973|consensus 99.3 2.1E-11 4.5E-16 71.1 7.5 84 1-85 141-230 (942)
141 KOG1009|consensus 99.3 1.5E-11 3.2E-16 65.8 6.5 83 1-84 77-175 (434)
142 KOG4378|consensus 99.3 4.9E-11 1.1E-15 65.7 8.4 80 3-84 223-303 (673)
143 KOG0640|consensus 99.3 7.5E-12 1.6E-16 65.5 5.0 72 1-72 273-345 (430)
144 KOG0307|consensus 99.3 3.5E-12 7.5E-17 74.6 3.9 85 1-85 129-217 (1049)
145 KOG0771|consensus 99.3 9.2E-12 2E-16 66.5 5.1 66 1-68 156-221 (398)
146 KOG1538|consensus 99.3 3.6E-11 7.7E-16 68.4 7.6 72 10-84 32-103 (1081)
147 PF08662 eIF2A: Eukaryotic tra 99.3 1.9E-10 4.1E-15 57.4 9.2 75 5-85 77-154 (194)
148 KOG0288|consensus 99.3 2.3E-12 5E-17 69.0 2.2 81 2-83 188-270 (459)
149 KOG0642|consensus 99.3 7E-11 1.5E-15 65.4 7.7 82 2-84 307-406 (577)
150 KOG1063|consensus 99.3 5E-11 1.1E-15 67.4 7.1 84 1-85 537-629 (764)
151 KOG1272|consensus 99.2 2.4E-11 5.3E-16 66.2 4.5 67 4-71 266-332 (545)
152 KOG0322|consensus 99.2 2.9E-11 6.3E-16 62.0 4.6 60 1-61 263-322 (323)
153 KOG1274|consensus 99.2 3.3E-10 7.1E-15 65.8 9.0 81 1-85 200-281 (933)
154 KOG1446|consensus 99.2 6.4E-10 1.4E-14 58.0 9.3 83 1-84 26-110 (311)
155 KOG1274|consensus 99.2 4.1E-10 8.8E-15 65.4 9.2 84 1-85 108-199 (933)
156 TIGR03866 PQQ_ABC_repeats PQQ- 99.2 9.9E-10 2.2E-14 57.2 9.8 81 1-84 1-82 (300)
157 KOG4378|consensus 99.2 1.7E-10 3.7E-15 63.7 6.4 81 3-84 179-260 (673)
158 TIGR03866 PQQ_ABC_repeats PQQ- 99.2 1.3E-09 2.7E-14 56.8 9.5 77 5-84 223-300 (300)
159 KOG1063|consensus 99.2 3.1E-10 6.7E-15 64.4 7.4 84 1-84 584-674 (764)
160 KOG1036|consensus 99.2 1.1E-09 2.5E-14 57.1 8.7 78 3-83 67-144 (323)
161 KOG0290|consensus 99.2 6.1E-10 1.3E-14 58.1 7.6 53 31-84 286-345 (364)
162 KOG1524|consensus 99.2 6.8E-10 1.5E-14 61.9 8.2 54 31-85 185-238 (737)
163 KOG0300|consensus 99.2 6.9E-10 1.5E-14 58.7 7.8 81 2-84 369-454 (481)
164 KOG1009|consensus 99.2 1.5E-10 3.3E-15 62.1 5.4 83 2-85 27-134 (434)
165 KOG0301|consensus 99.2 1.3E-09 2.8E-14 61.9 9.2 75 3-81 192-266 (745)
166 KOG1539|consensus 99.1 1.3E-09 2.8E-14 63.0 9.0 81 2-83 173-253 (910)
167 KOG2048|consensus 99.1 1.2E-09 2.5E-14 61.9 8.6 82 2-84 167-255 (691)
168 KOG2394|consensus 99.1 8.6E-10 1.9E-14 61.3 7.3 53 33-85 291-343 (636)
169 KOG2919|consensus 99.1 3.9E-10 8.4E-15 59.5 5.7 85 1-85 262-351 (406)
170 KOG1036|consensus 99.1 2.3E-09 5E-14 56.0 8.3 79 2-84 26-104 (323)
171 KOG0268|consensus 99.1 2.2E-10 4.7E-15 61.0 4.7 80 4-83 244-324 (433)
172 KOG2048|consensus 99.1 3.9E-09 8.4E-14 59.9 9.6 83 1-84 80-164 (691)
173 KOG0650|consensus 99.1 7.1E-10 1.5E-14 62.3 6.7 55 30-85 398-452 (733)
174 KOG2445|consensus 99.1 6.5E-09 1.4E-13 54.6 9.4 83 1-84 73-179 (361)
175 KOG1310|consensus 99.1 1.1E-09 2.4E-14 61.3 6.9 63 1-63 62-126 (758)
176 KOG4547|consensus 99.1 4.1E-09 8.8E-14 58.7 8.5 77 4-83 117-193 (541)
177 KOG2919|consensus 99.1 1.6E-09 3.4E-14 57.3 6.5 83 2-85 124-218 (406)
178 KOG0974|consensus 99.0 5.2E-09 1.1E-13 61.5 8.8 82 3-85 147-229 (967)
179 KOG0301|consensus 99.0 2E-09 4.4E-14 61.2 6.9 75 3-82 153-227 (745)
180 KOG0280|consensus 99.0 1E-08 2.3E-13 53.6 8.4 82 2-84 179-263 (339)
181 KOG4328|consensus 99.0 1.9E-09 4.2E-14 58.8 5.9 61 2-62 336-399 (498)
182 PF08662 eIF2A: Eukaryotic tra 99.0 1.6E-08 3.4E-13 50.7 8.5 64 1-68 112-184 (194)
183 KOG1524|consensus 99.0 1.5E-09 3.2E-14 60.7 5.1 81 2-85 76-156 (737)
184 KOG4328|consensus 99.0 3.1E-09 6.7E-14 58.1 5.8 81 4-85 294-380 (498)
185 KOG0307|consensus 98.9 2.9E-09 6.3E-14 63.0 5.4 82 3-84 221-306 (1049)
186 KOG1188|consensus 98.9 6.9E-09 1.5E-13 55.0 6.3 65 2-67 41-107 (376)
187 KOG2110|consensus 98.9 2.4E-08 5.3E-13 53.4 8.3 63 1-63 185-249 (391)
188 KOG2106|consensus 98.9 6.1E-08 1.3E-12 54.0 10.0 53 32-84 447-501 (626)
189 COG2319 FOG: WD40 repeat [Gene 98.9 5.4E-08 1.2E-12 52.0 9.8 77 7-84 130-208 (466)
190 KOG3881|consensus 98.9 1.3E-08 2.9E-13 54.7 7.3 67 1-67 259-325 (412)
191 KOG0321|consensus 98.9 5.1E-09 1.1E-13 59.3 5.7 82 3-84 66-154 (720)
192 KOG3881|consensus 98.9 2.5E-08 5.4E-13 53.7 7.7 82 2-84 217-300 (412)
193 KOG0649|consensus 98.9 2.7E-08 5.8E-13 51.1 7.4 67 2-71 169-244 (325)
194 KOG0650|consensus 98.9 5.4E-08 1.2E-12 55.2 8.9 28 1-28 412-439 (733)
195 KOG1273|consensus 98.9 7E-09 1.5E-13 54.8 5.2 51 35-85 26-76 (405)
196 KOG2106|consensus 98.9 3.7E-08 8.1E-13 54.8 8.1 78 2-85 381-458 (626)
197 KOG0321|consensus 98.9 6E-09 1.3E-13 59.0 4.7 62 2-64 113-177 (720)
198 KOG2139|consensus 98.9 7.3E-08 1.6E-12 51.9 8.2 82 2-84 208-290 (445)
199 KOG4227|consensus 98.8 3.1E-08 6.7E-13 53.9 6.7 84 1-84 68-159 (609)
200 KOG2055|consensus 98.8 6.8E-08 1.5E-12 53.2 7.6 69 1-71 315-383 (514)
201 KOG1963|consensus 98.8 1.6E-07 3.5E-12 54.7 8.7 84 1-85 217-303 (792)
202 PF02239 Cytochrom_D1: Cytochr 98.8 8.3E-07 1.8E-11 48.5 10.8 69 1-71 48-117 (369)
203 PF11768 DUF3312: Protein of u 98.8 2.9E-07 6.3E-12 51.9 9.1 58 2-62 272-329 (545)
204 KOG1272|consensus 98.8 1.5E-08 3.3E-13 55.8 4.1 81 3-84 223-303 (545)
205 COG2319 FOG: WD40 repeat [Gene 98.8 6.2E-07 1.3E-11 48.0 10.0 80 3-84 169-251 (466)
206 KOG3914|consensus 98.7 7.9E-08 1.7E-12 51.9 6.0 69 2-71 164-232 (390)
207 KOG2096|consensus 98.7 6.3E-08 1.4E-12 51.5 5.6 61 1-62 240-308 (420)
208 KOG2321|consensus 98.7 2.3E-07 4.9E-12 52.6 7.7 82 2-83 188-280 (703)
209 KOG0771|consensus 98.7 3.2E-08 6.8E-13 53.5 4.3 50 36-85 148-197 (398)
210 KOG1523|consensus 98.7 1.9E-07 4.2E-12 49.5 6.9 83 2-85 23-111 (361)
211 PF02239 Cytochrom_D1: Cytochr 98.7 1.4E-06 3E-11 47.7 10.3 78 5-84 10-87 (369)
212 KOG4714|consensus 98.7 2.9E-08 6.2E-13 51.3 3.3 61 2-62 193-254 (319)
213 KOG1310|consensus 98.7 7.2E-08 1.6E-12 54.4 5.0 56 30-85 48-104 (758)
214 KOG1523|consensus 98.6 7.1E-07 1.5E-11 47.4 7.5 83 2-85 68-157 (361)
215 KOG1517|consensus 98.6 9.4E-07 2E-11 53.3 8.6 63 1-64 1221-1289(1387)
216 smart00320 WD40 WD40 repeats. 98.6 8.2E-07 1.8E-11 32.0 5.7 37 23-60 4-40 (40)
217 KOG1517|consensus 98.6 1E-06 2.2E-11 53.2 8.3 82 3-84 1179-1266(1387)
218 KOG2695|consensus 98.6 3.8E-07 8.3E-12 49.0 6.0 70 1-71 311-385 (425)
219 KOG0974|consensus 98.6 1E-06 2.2E-11 52.5 8.2 70 1-73 187-256 (967)
220 PRK01742 tolB translocation pr 98.6 5.4E-07 1.2E-11 50.0 6.5 81 1-85 344-426 (429)
221 KOG4640|consensus 98.5 1.4E-06 2.9E-11 49.9 7.4 80 2-83 33-114 (665)
222 KOG4532|consensus 98.5 8.6E-06 1.9E-10 42.8 9.4 84 2-85 171-261 (344)
223 PRK01742 tolB translocation pr 98.5 3.2E-06 7E-11 47.0 8.5 81 1-84 215-301 (429)
224 KOG0644|consensus 98.4 1E-07 2.2E-12 56.0 1.6 55 3-62 246-300 (1113)
225 KOG4497|consensus 98.4 1E-05 2.2E-10 43.7 8.7 79 4-84 64-143 (447)
226 KOG1587|consensus 98.4 1E-06 2.2E-11 50.3 5.3 78 4-83 414-495 (555)
227 KOG0642|consensus 98.4 9.4E-07 2E-11 49.8 5.1 71 2-73 502-572 (577)
228 COG4946 Uncharacterized protei 98.4 2.2E-05 4.7E-10 44.3 10.1 81 3-85 373-454 (668)
229 KOG2139|consensus 98.4 2.1E-05 4.7E-10 42.8 8.9 54 32-85 195-249 (445)
230 KOG4227|consensus 98.3 1.5E-05 3.2E-10 44.0 8.3 83 2-84 118-204 (609)
231 KOG2066|consensus 98.3 8.9E-06 1.9E-10 47.9 7.8 81 1-84 83-170 (846)
232 KOG1538|consensus 98.3 3.1E-06 6.6E-11 49.3 5.8 50 34-84 14-63 (1081)
233 KOG1587|consensus 98.3 1.9E-05 4.2E-10 45.4 8.9 73 11-84 222-301 (555)
234 KOG1334|consensus 98.2 6.5E-07 1.4E-11 49.9 2.0 61 2-63 407-467 (559)
235 KOG2321|consensus 98.2 5.5E-06 1.2E-10 47.3 5.4 80 3-84 242-323 (703)
236 KOG1240|consensus 98.2 2.4E-05 5.2E-10 48.2 8.2 61 2-63 1062-1129(1431)
237 KOG2695|consensus 98.2 4.4E-06 9.4E-11 45.1 4.7 72 1-74 264-344 (425)
238 KOG1645|consensus 98.2 2E-05 4.4E-10 43.4 7.2 61 3-65 208-269 (463)
239 PRK03629 tolB translocation pr 98.2 2E-05 4.3E-10 44.0 7.3 81 1-85 342-428 (429)
240 KOG4547|consensus 98.2 5.1E-05 1.1E-09 43.2 8.7 82 3-84 72-154 (541)
241 PRK02889 tolB translocation pr 98.2 5.6E-05 1.2E-09 42.3 8.9 81 1-84 207-293 (427)
242 KOG1064|consensus 98.2 7.5E-06 1.6E-10 52.1 5.8 80 2-82 2221-2300(2439)
243 PF12894 Apc4_WD40: Anaphase-p 98.2 2.3E-05 5E-10 30.6 5.3 34 32-66 11-44 (47)
244 KOG0280|consensus 98.2 6.2E-05 1.3E-09 40.1 8.2 81 3-84 135-220 (339)
245 PRK05137 tolB translocation pr 98.2 8.5E-05 1.8E-09 41.6 8.9 81 1-84 213-299 (435)
246 KOG2079|consensus 98.1 7.2E-06 1.6E-10 49.7 4.9 78 3-80 101-178 (1206)
247 KOG4714|consensus 98.1 3.9E-06 8.5E-11 43.8 3.4 52 34-85 181-234 (319)
248 PRK04922 tolB translocation pr 98.1 0.00012 2.6E-09 41.0 8.8 81 1-84 215-301 (433)
249 PF15492 Nbas_N: Neuroblastoma 98.1 4.2E-05 9.1E-10 40.3 6.5 46 31-76 228-273 (282)
250 PRK03629 tolB translocation pr 98.1 0.00012 2.6E-09 41.0 8.8 81 1-84 210-296 (429)
251 KOG1912|consensus 98.1 3.1E-05 6.8E-10 46.0 6.5 82 3-85 81-166 (1062)
252 KOG1240|consensus 98.1 4.4E-05 9.5E-10 47.2 7.2 81 3-83 1165-1247(1431)
253 KOG3621|consensus 98.1 2.5E-05 5.4E-10 45.5 6.0 85 1-85 45-135 (726)
254 PRK05137 tolB translocation pr 98.1 0.0002 4.2E-09 40.2 9.3 71 11-84 182-255 (435)
255 PRK11028 6-phosphogluconolacto 98.1 0.00022 4.7E-09 38.5 9.1 63 1-63 186-259 (330)
256 KOG1275|consensus 98.1 1.4E-05 3E-10 47.9 4.7 67 2-71 188-263 (1118)
257 KOG1334|consensus 98.0 1.5E-05 3.2E-10 44.8 4.4 84 1-84 154-242 (559)
258 KOG2315|consensus 98.0 6.2E-05 1.3E-09 42.9 6.8 59 1-62 323-390 (566)
259 KOG2314|consensus 98.0 3.9E-05 8.4E-10 44.0 6.0 73 11-84 282-356 (698)
260 KOG1963|consensus 98.0 7.7E-05 1.7E-09 44.2 7.3 63 1-65 263-325 (792)
261 PRK02889 tolB translocation pr 98.0 0.00012 2.6E-09 41.0 7.6 71 11-84 176-249 (427)
262 KOG1064|consensus 98.0 1.3E-05 2.8E-10 51.1 3.7 63 9-71 2313-2375(2439)
263 PRK04922 tolB translocation pr 97.9 0.00014 2.9E-09 40.8 7.2 81 1-85 347-433 (433)
264 PRK11028 6-phosphogluconolacto 97.9 0.00055 1.2E-08 37.0 9.1 57 4-62 5-65 (330)
265 PF00400 WD40: WD domain, G-be 97.9 2.3E-05 5.1E-10 29.0 2.8 17 1-17 23-39 (39)
266 PF11768 DUF3312: Protein of u 97.9 0.00027 5.9E-09 40.6 7.8 52 31-84 258-309 (545)
267 PRK00178 tolB translocation pr 97.9 0.00053 1.1E-08 38.4 8.9 81 1-84 210-296 (430)
268 TIGR02800 propeller_TolB tol-p 97.9 0.00072 1.6E-08 37.5 9.1 63 1-65 201-269 (417)
269 TIGR02800 propeller_TolB tol-p 97.8 0.00059 1.3E-08 37.9 8.6 70 12-84 171-243 (417)
270 PF08553 VID27: VID27 cytoplas 97.8 0.00013 2.8E-09 43.7 6.1 58 2-61 589-646 (794)
271 KOG3914|consensus 97.8 0.00021 4.6E-09 39.3 6.5 53 31-83 150-203 (390)
272 PRK01029 tolB translocation pr 97.8 0.00084 1.8E-08 37.8 8.9 82 1-85 338-425 (428)
273 KOG4497|consensus 97.8 3.3E-05 7.1E-10 41.8 3.2 82 1-85 20-102 (447)
274 COG4946 Uncharacterized protei 97.7 0.00091 2E-08 38.2 8.2 64 1-65 413-480 (668)
275 PRK04792 tolB translocation pr 97.7 0.001 2.2E-08 37.7 8.5 81 1-84 229-315 (448)
276 KOG1912|consensus 97.7 0.00034 7.3E-09 41.9 6.6 80 3-84 28-119 (1062)
277 KOG2315|consensus 97.7 0.00095 2.1E-08 38.4 8.0 67 12-84 295-364 (566)
278 KOG4532|consensus 97.7 0.00089 1.9E-08 35.6 7.4 64 3-66 217-286 (344)
279 TIGR02658 TTQ_MADH_Hv methylam 97.7 0.0015 3.2E-08 36.1 8.5 63 9-71 75-145 (352)
280 KOG1409|consensus 97.7 8.9E-05 1.9E-09 40.3 3.8 63 2-64 210-272 (404)
281 TIGR03300 assembly_YfgL outer 97.6 0.0013 2.8E-08 36.2 7.6 71 2-74 280-350 (377)
282 PF15492 Nbas_N: Neuroblastoma 97.5 0.0028 6.1E-08 33.8 7.7 31 33-63 44-74 (282)
283 KOG4649|consensus 97.5 0.0026 5.6E-08 33.9 7.4 70 1-71 63-132 (354)
284 PRK01029 tolB translocation pr 97.5 0.0047 1E-07 35.0 9.3 82 1-84 292-380 (428)
285 TIGR02658 TTQ_MADH_Hv methylam 97.5 0.0043 9.4E-08 34.3 10.5 58 11-70 279-338 (352)
286 PLN02919 haloacid dehalogenase 97.5 0.0042 9.1E-08 38.9 9.2 66 1-66 815-892 (1057)
287 KOG0309|consensus 97.5 0.0002 4.4E-09 42.7 3.6 80 3-83 129-210 (1081)
288 KOG2041|consensus 97.5 0.0014 3.1E-08 39.3 6.8 81 2-83 27-124 (1189)
289 PRK00178 tolB translocation pr 97.5 0.0032 7E-08 35.4 8.0 70 12-84 180-252 (430)
290 PF04053 Coatomer_WDAD: Coatom 97.4 0.0037 8E-08 35.6 8.0 57 1-62 117-173 (443)
291 KOG2066|consensus 97.4 0.002 4.3E-08 38.7 7.1 74 2-85 50-123 (846)
292 KOG3621|consensus 97.3 0.0021 4.5E-08 38.1 6.3 61 3-63 90-155 (726)
293 PF07569 Hira: TUP1-like enhan 97.3 0.0056 1.2E-07 31.7 7.8 63 1-64 22-97 (219)
294 PF14783 BBS2_Mid: Ciliary BBS 97.3 0.004 8.6E-08 28.8 10.1 55 2-61 16-70 (111)
295 KOG2314|consensus 97.2 0.0022 4.7E-08 37.3 5.5 67 2-72 223-300 (698)
296 KOG4190|consensus 97.2 0.0012 2.5E-08 38.6 4.4 66 5-70 845-914 (1034)
297 KOG1275|consensus 97.2 0.0096 2.1E-07 36.8 8.1 78 3-83 149-226 (1118)
298 KOG4190|consensus 97.1 0.0018 3.9E-08 37.9 4.7 64 2-68 748-818 (1034)
299 KOG2395|consensus 97.1 0.0028 6.1E-08 36.7 5.2 54 2-56 442-495 (644)
300 PRK04792 tolB translocation pr 97.1 0.012 2.5E-07 33.6 7.7 70 12-85 375-447 (448)
301 KOG3617|consensus 97.1 0.0034 7.5E-08 38.5 5.7 58 4-62 74-131 (1416)
302 KOG1645|consensus 97.0 0.0022 4.7E-08 35.9 4.0 52 31-83 192-244 (463)
303 TIGR03300 assembly_YfgL outer 97.0 0.021 4.6E-07 31.6 7.9 64 2-68 66-129 (377)
304 PF13360 PQQ_2: PQQ-like domai 96.9 0.017 3.7E-07 29.6 6.9 71 2-72 77-150 (238)
305 KOG1354|consensus 96.9 0.0082 1.8E-07 33.2 5.4 71 2-73 227-313 (433)
306 COG5354 Uncharacterized protei 96.8 0.012 2.6E-07 34.0 6.0 63 11-76 53-130 (561)
307 PF13360 PQQ_2: PQQ-like domai 96.8 0.022 4.9E-07 29.2 7.0 65 2-69 37-101 (238)
308 KOG1409|consensus 96.7 0.02 4.4E-07 31.7 6.1 79 4-82 39-122 (404)
309 PRK11138 outer membrane biogen 96.7 0.041 8.9E-07 30.8 7.8 67 3-71 296-362 (394)
310 PF11715 Nup160: Nucleoporin N 96.7 0.052 1.1E-06 31.8 8.1 35 35-69 217-255 (547)
311 PF04762 IKI3: IKI3 family; I 96.5 0.047 1E-06 34.2 7.5 81 1-84 221-314 (928)
312 KOG2444|consensus 96.5 0.012 2.7E-07 30.6 4.4 62 2-64 115-179 (238)
313 KOG1832|consensus 96.5 0.011 2.3E-07 36.8 4.7 51 31-81 1100-1150(1516)
314 PF10313 DUF2415: Uncharacteri 96.5 0.013 2.8E-07 22.5 5.0 30 34-63 2-34 (43)
315 PF06433 Me-amine-dh_H: Methyl 96.4 0.034 7.4E-07 30.8 6.0 58 13-72 271-330 (342)
316 KOG2444|consensus 96.4 0.039 8.4E-07 28.9 5.9 72 2-74 71-144 (238)
317 KOG1832|consensus 96.4 0.0049 1.1E-07 38.2 3.1 61 2-63 1114-1176(1516)
318 KOG1354|consensus 96.4 0.033 7.1E-07 31.0 5.7 63 1-63 37-117 (433)
319 COG5167 VID27 Protein involved 96.3 0.043 9.3E-07 32.3 6.0 59 2-62 574-632 (776)
320 KOG2041|consensus 96.2 0.025 5.4E-07 34.5 5.2 60 2-61 84-144 (1189)
321 PF12234 Rav1p_C: RAVE protein 96.2 0.12 2.7E-06 31.1 7.9 53 9-61 49-103 (631)
322 PRK11138 outer membrane biogen 96.1 0.097 2.1E-06 29.4 6.9 66 2-71 121-187 (394)
323 PRK04043 tolB translocation pr 96.0 0.13 2.8E-06 29.4 9.9 54 10-65 212-268 (419)
324 PF00780 CNH: CNH domain; Int 96.0 0.097 2.1E-06 27.7 7.4 61 1-65 7-67 (275)
325 PF14655 RAB3GAP2_N: Rab3 GTPa 96.0 0.14 2.9E-06 29.4 7.5 71 1-72 319-408 (415)
326 KOG0882|consensus 95.9 0.039 8.4E-07 31.8 4.8 68 4-71 159-240 (558)
327 COG2706 3-carboxymuconate cycl 95.8 0.14 3E-06 28.5 8.8 85 1-85 100-201 (346)
328 KOG0309|consensus 95.8 0.0093 2E-07 36.2 2.3 60 4-64 173-234 (1081)
329 PF04762 IKI3: IKI3 family; I 95.8 0.26 5.7E-06 31.2 8.1 56 3-60 89-148 (928)
330 PF10282 Lactonase: Lactonase, 95.8 0.15 3.2E-06 28.2 10.5 61 1-62 256-322 (345)
331 PF07433 DUF1513: Protein of u 95.7 0.15 3.3E-06 28.0 9.2 79 4-82 20-106 (305)
332 KOG4640|consensus 95.6 0.054 1.2E-06 32.3 4.7 53 32-85 20-73 (665)
333 PLN02919 haloacid dehalogenase 95.4 0.4 8.7E-06 30.8 8.7 62 3-65 697-773 (1057)
334 KOG4499|consensus 95.4 0.18 4E-06 26.9 7.3 46 38-83 217-262 (310)
335 PF08596 Lgl_C: Lethal giant l 95.3 0.25 5.5E-06 28.1 7.3 61 2-62 98-173 (395)
336 PF00930 DPPIV_N: Dipeptidyl p 95.3 0.093 2E-06 29.1 4.9 52 11-65 23-74 (353)
337 PF14655 RAB3GAP2_N: Rab3 GTPa 95.3 0.26 5.7E-06 28.3 6.5 41 32-72 307-347 (415)
338 PF10282 Lactonase: Lactonase, 95.2 0.25 5.5E-06 27.4 11.6 84 1-84 98-201 (345)
339 KOG1008|consensus 95.1 0.0077 1.7E-07 35.8 0.5 79 3-85 168-254 (783)
340 KOG0882|consensus 95.0 0.0089 1.9E-07 34.2 0.6 62 2-64 21-86 (558)
341 PF11715 Nup160: Nucleoporin N 94.9 0.09 1.9E-06 30.9 4.2 26 2-27 231-256 (547)
342 PF07569 Hira: TUP1-like enhan 94.9 0.1 2.2E-06 27.2 4.1 28 40-67 18-45 (219)
343 COG5170 CDC55 Serine/threonine 94.8 0.12 2.6E-06 28.6 4.3 68 3-71 236-319 (460)
344 PF08553 VID27: VID27 cytoplas 94.8 0.57 1.2E-05 29.3 8.9 78 4-83 545-627 (794)
345 KOG1920|consensus 94.7 0.37 8.1E-06 31.3 6.6 71 11-84 222-299 (1265)
346 PRK02888 nitrous-oxide reducta 94.7 0.53 1.1E-05 28.6 7.7 54 10-65 295-354 (635)
347 KOG2079|consensus 94.7 0.45 9.7E-06 30.7 6.8 54 1-55 142-198 (1206)
348 KOG3617|consensus 94.6 0.032 6.9E-07 34.8 2.0 74 9-85 39-112 (1416)
349 PF04841 Vps16_N: Vps16, N-ter 94.5 0.47 1E-05 27.2 9.5 51 33-83 217-268 (410)
350 KOG1008|consensus 94.5 0.012 2.5E-07 35.1 0.2 56 9-64 127-186 (783)
351 TIGR02276 beta_rpt_yvtn 40-res 94.4 0.11 2.3E-06 19.1 4.7 31 42-72 1-32 (42)
352 COG5354 Uncharacterized protei 94.3 0.36 7.7E-06 28.5 5.6 73 11-84 108-183 (561)
353 PF14761 HPS3_N: Hermansky-Pud 94.1 0.43 9.4E-06 25.0 5.7 48 2-51 29-78 (215)
354 cd00216 PQQ_DH Dehydrogenases 94.0 0.61 1.3E-05 27.3 6.2 69 2-71 62-137 (488)
355 COG5170 CDC55 Serine/threonine 93.9 0.48 1E-05 26.5 5.3 31 31-62 171-201 (460)
356 PF04053 Coatomer_WDAD: Coatom 93.8 0.76 1.6E-05 26.8 7.3 38 44-84 117-154 (443)
357 PF07433 DUF1513: Protein of u 93.6 0.66 1.4E-05 25.7 9.1 74 10-84 76-172 (305)
358 smart00564 PQQ beta-propeller 93.6 0.14 3E-06 17.8 3.6 24 3-26 8-31 (33)
359 TIGR03075 PQQ_enz_alc_DH PQQ-d 93.6 0.47 1E-05 28.1 5.3 60 11-72 441-500 (527)
360 PF03088 Str_synth: Strictosid 93.5 0.33 7.1E-06 21.7 6.4 42 7-50 33-74 (89)
361 PF08450 SGL: SMP-30/Gluconola 93.1 0.68 1.5E-05 24.3 9.9 78 5-83 150-233 (246)
362 KOG3630|consensus 93.0 0.45 9.7E-06 31.0 4.8 30 32-61 198-227 (1405)
363 COG2706 3-carboxymuconate cycl 92.7 1 2.3E-05 25.3 7.6 62 2-63 157-222 (346)
364 PF14583 Pectate_lyase22: Olig 92.7 1.1 2.5E-05 25.7 7.4 67 3-70 50-118 (386)
365 PF10168 Nup88: Nuclear pore c 92.5 1.6 3.6E-05 27.1 8.0 33 32-64 146-181 (717)
366 PF13570 PQQ_3: PQQ-like domai 92.2 0.3 6.4E-06 18.0 2.9 18 2-19 22-39 (40)
367 KOG2377|consensus 92.1 1.6 3.4E-05 26.0 9.0 54 31-84 65-122 (657)
368 TIGR03075 PQQ_enz_alc_DH PQQ-d 92.1 1.6 3.5E-05 26.0 7.2 69 2-71 121-198 (527)
369 KOG4460|consensus 91.9 1.8 3.9E-05 26.2 7.3 34 34-67 167-203 (741)
370 PF01011 PQQ: PQQ enzyme repea 91.7 0.36 7.7E-06 17.7 4.0 27 3-29 2-28 (38)
371 PF14269 Arylsulfotran_2: Aryl 91.5 1.4 3.1E-05 24.3 6.3 61 1-61 155-219 (299)
372 PF05096 Glu_cyclase_2: Glutam 91.5 1.4 3E-05 24.0 6.7 62 6-71 105-166 (264)
373 KOG2247|consensus 91.4 0.069 1.5E-06 31.2 0.3 79 5-84 91-169 (615)
374 COG0823 TolB Periplasmic compo 91.4 1.2 2.7E-05 25.8 5.0 53 11-65 218-273 (425)
375 PF08450 SGL: SMP-30/Gluconola 90.9 1.4 3.1E-05 23.1 10.2 79 3-84 53-143 (246)
376 cd00216 PQQ_DH Dehydrogenases 90.8 2.2 4.8E-05 25.1 6.0 29 1-29 406-434 (488)
377 PF06433 Me-amine-dh_H: Methyl 90.7 2 4.2E-05 24.4 6.0 55 11-68 17-81 (342)
378 KOG4499|consensus 90.4 1.8 3.9E-05 23.5 6.9 41 1-42 223-263 (310)
379 KOG4649|consensus 90.3 1.9 4.2E-05 23.7 7.2 65 3-70 25-89 (354)
380 PF01436 NHL: NHL repeat; Int 90.3 0.43 9.4E-06 16.2 4.0 24 36-59 5-28 (28)
381 COG0823 TolB Periplasmic compo 90.3 2.4 5.2E-05 24.7 6.2 57 5-63 254-315 (425)
382 KOG2114|consensus 89.9 3.7 7.9E-05 26.3 8.0 82 3-84 139-224 (933)
383 PF03178 CPSF_A: CPSF A subuni 89.6 2.2 4.8E-05 23.5 9.1 62 1-62 139-202 (321)
384 KOG1920|consensus 89.6 4.5 9.7E-05 26.9 8.0 57 2-60 81-137 (1265)
385 PF14781 BBS2_N: Ciliary BBSom 88.8 1.7 3.8E-05 21.2 8.8 76 3-82 12-100 (136)
386 PF02897 Peptidase_S9_N: Proly 88.5 3.1 6.8E-05 23.7 5.6 33 35-67 126-163 (414)
387 COG3386 Gluconolactonase [Carb 88.5 2.9 6.3E-05 23.3 5.7 30 33-62 163-193 (307)
388 KOG1916|consensus 88.5 1 2.3E-05 28.9 3.5 24 39-62 242-265 (1283)
389 PF04841 Vps16_N: Vps16, N-ter 87.9 3.7 7.9E-05 23.8 8.5 48 12-62 62-109 (410)
390 KOG2395|consensus 87.9 4.4 9.5E-05 24.7 7.2 77 5-82 398-479 (644)
391 PF08596 Lgl_C: Lethal giant l 87.7 3.8 8.1E-05 23.7 6.7 64 7-71 231-299 (395)
392 PF07676 PD40: WD40-like Beta 87.6 0.9 2E-05 16.4 5.3 28 32-59 8-38 (39)
393 PRK04043 tolB translocation pr 86.9 4.4 9.5E-05 23.6 8.7 70 11-84 169-242 (419)
394 PF14870 PSII_BNR: Photosynthe 86.5 4 8.7E-05 22.7 10.0 57 2-60 157-213 (302)
395 TIGR03074 PQQ_membr_DH membran 86.3 6.5 0.00014 25.0 7.8 70 2-71 261-353 (764)
396 PF06977 SdiA-regulated: SdiA- 84.7 4.6 0.0001 21.8 8.2 57 1-59 183-247 (248)
397 PRK13616 lipoprotein LpqB; Pro 84.2 7.5 0.00016 23.9 5.6 26 32-58 447-472 (591)
398 PF12768 Rax2: Cortical protei 83.9 5.4 0.00012 22.0 6.0 56 9-65 14-75 (281)
399 PRK13616 lipoprotein LpqB; Pro 83.5 8.1 0.00018 23.8 7.6 48 35-85 399-458 (591)
400 PF15390 DUF4613: Domain of un 82.8 9.1 0.0002 23.8 7.2 34 30-63 153-187 (671)
401 COG3391 Uncharacterized conser 82.4 7.2 0.00016 22.3 8.8 78 4-84 89-169 (381)
402 TIGR03074 PQQ_membr_DH membran 81.6 11 0.00024 24.0 6.0 46 1-46 691-738 (764)
403 KOG2114|consensus 81.2 12 0.00027 24.2 8.1 69 11-80 193-262 (933)
404 PF14779 BBS1: Ciliary BBSome 80.7 7.3 0.00016 21.3 7.2 55 3-59 197-255 (257)
405 PF06977 SdiA-regulated: SdiA- 80.6 7.2 0.00016 21.1 8.6 59 3-62 36-94 (248)
406 PF14870 PSII_BNR: Photosynthe 79.9 8.4 0.00018 21.6 10.4 54 31-84 143-196 (302)
407 KOG2467|consensus 79.3 2.4 5.1E-05 24.6 2.2 20 2-21 342-361 (477)
408 PF12341 DUF3639: Protein of u 79.2 2.3 5E-05 14.6 3.8 24 35-60 4-27 (27)
409 PF07995 GSDH: Glucose / Sorbo 77.1 11 0.00023 21.2 6.9 55 3-57 273-330 (331)
410 TIGR02171 Fb_sc_TIGR02171 Fibr 77.0 18 0.00039 23.7 7.0 52 11-64 329-387 (912)
411 PF08801 Nucleoporin_N: Nup133 76.9 8.3 0.00018 22.3 3.9 29 35-63 192-220 (422)
412 PF08728 CRT10: CRT10; InterP 76.7 17 0.00036 23.2 8.5 81 2-84 115-220 (717)
413 PF01731 Arylesterase: Arylest 76.7 5.6 0.00012 17.8 6.1 30 33-62 54-84 (86)
414 PHA02713 hypothetical protein; 75.1 16 0.00035 22.3 5.2 25 43-67 512-538 (557)
415 PF12234 Rav1p_C: RAVE protein 73.2 20 0.00044 22.5 7.4 48 36-83 33-81 (631)
416 PF10214 Rrn6: RNA polymerase 73.0 10 0.00023 24.0 3.9 29 33-61 146-175 (765)
417 KOG3630|consensus 71.3 4.6 0.0001 26.9 2.2 80 5-84 118-208 (1405)
418 COG3490 Uncharacterized protei 71.0 17 0.00036 20.7 6.7 70 13-82 93-169 (366)
419 PF12657 TFIIIC_delta: Transcr 69.3 13 0.00028 18.7 4.5 29 34-62 87-121 (173)
420 TIGR03054 photo_alph_chp1 puta 68.9 12 0.00027 18.3 6.1 63 4-66 44-117 (135)
421 PF07995 GSDH: Glucose / Sorbo 67.0 21 0.00045 20.2 6.6 48 35-84 4-58 (331)
422 PF11635 Med16: Mediator compl 66.8 31 0.00068 22.1 5.6 56 2-57 272-345 (753)
423 PF08309 LVIVD: LVIVD repeat; 66.6 7.3 0.00016 14.8 3.6 25 1-25 11-35 (42)
424 COG1520 FOG: WD40-like repeat 66.2 22 0.00048 20.2 6.7 69 3-72 70-139 (370)
425 PF08728 CRT10: CRT10; InterP 66.2 32 0.0007 22.1 5.5 60 2-61 178-245 (717)
426 KOG1520|consensus 66.1 19 0.00041 21.0 3.7 44 6-51 194-237 (376)
427 COG4590 ABC-type uncharacteriz 65.7 28 0.00062 21.3 7.3 64 2-66 281-350 (733)
428 PF14269 Arylsulfotran_2: Aryl 65.7 22 0.00047 19.9 4.7 40 34-73 145-184 (299)
429 KOG3616|consensus 65.2 37 0.0008 22.4 4.9 32 33-64 15-46 (1636)
430 PRK02888 nitrous-oxide reducta 65.2 32 0.0007 21.7 7.1 58 4-63 336-405 (635)
431 PF10433 MMS1_N: Mono-function 65.0 28 0.0006 20.9 9.0 70 13-84 429-503 (504)
432 PF02897 Peptidase_S9_N: Proly 62.1 29 0.00062 20.0 8.2 53 11-65 150-213 (414)
433 PF00843 Arena_nucleocap: Aren 61.8 5.2 0.00011 23.7 1.1 19 49-67 147-165 (533)
434 PRK10115 protease 2; Provision 60.5 41 0.00089 21.4 6.8 33 34-66 128-165 (686)
435 KOG1983|consensus 58.7 33 0.00071 22.9 4.1 26 41-66 243-268 (993)
436 KOG2727|consensus 58.7 27 0.00059 23.3 3.7 38 35-72 324-361 (1244)
437 PF10214 Rrn6: RNA polymerase 57.2 50 0.0011 21.3 8.9 64 2-66 159-236 (765)
438 PF10584 Proteasome_A_N: Prote 56.5 5 0.00011 13.2 0.3 7 40-46 8-14 (23)
439 COG3391 Uncharacterized conser 54.4 41 0.00089 19.5 8.7 54 10-65 139-193 (381)
440 smart00036 CNH Domain found in 54.1 38 0.00081 18.9 7.6 58 2-62 14-73 (302)
441 PF05694 SBP56: 56kDa selenium 52.7 51 0.0011 20.0 6.4 51 9-59 220-274 (461)
442 PF14727 PHTB1_N: PTHB1 N-term 52.4 49 0.0011 19.8 6.4 57 2-61 146-203 (418)
443 PRK14751 tetracycline resistan 51.9 12 0.00026 12.6 1.1 11 51-61 12-22 (28)
444 COG4247 Phy 3-phytase (myo-ino 51.4 39 0.00084 19.0 3.2 28 35-62 58-85 (364)
445 KOG4441|consensus 51.4 58 0.0012 20.3 5.5 61 2-64 334-406 (571)
446 PRK10526 acyl-CoA thioesterase 50.8 43 0.00093 18.6 6.2 56 4-59 224-285 (286)
447 KOG2727|consensus 49.3 35 0.00075 22.9 3.1 36 46-82 102-137 (1244)
448 PF09826 Beta_propel: Beta pro 46.0 71 0.0015 19.7 7.5 54 11-65 304-358 (521)
449 cd01272 FE65_N Fe65 Phosphotyr 45.2 40 0.00087 16.7 3.9 25 43-67 51-75 (138)
450 PF09631 Sen15: Sen15 protein; 44.5 34 0.00074 15.7 2.5 19 46-64 76-94 (101)
451 PF08954 DUF1900: Domain of un 44.2 41 0.00089 16.5 6.0 30 35-64 13-43 (136)
452 KOG2109|consensus 43.7 61 0.0013 20.9 3.5 46 15-61 299-345 (788)
453 KOG0080|consensus 43.6 35 0.00076 17.7 2.2 14 51-64 83-96 (209)
454 PF03178 CPSF_A: CPSF A subuni 43.2 60 0.0013 18.1 8.0 52 9-62 105-157 (321)
455 PF10411 DsbC_N: Disulfide bon 42.8 27 0.00059 14.1 2.2 10 41-50 39-48 (57)
456 PF10168 Nup88: Nuclear pore c 42.3 95 0.0021 20.2 10.5 22 34-55 86-107 (717)
457 KOG1916|consensus 42.1 1.1E+02 0.0024 20.9 4.6 21 47-67 307-328 (1283)
458 KOG1898|consensus 41.7 1.2E+02 0.0025 21.0 4.9 50 6-57 949-999 (1205)
459 COG1946 TesB Acyl-CoA thioeste 41.7 34 0.00074 19.3 2.1 25 35-59 261-285 (289)
460 KOG4460|consensus 40.9 93 0.002 19.7 8.6 25 35-59 106-130 (741)
461 KOG2280|consensus 40.8 1.1E+02 0.0023 20.3 4.7 39 33-71 217-255 (829)
462 PF15644 Tox-PL: Papain fold t 40.3 42 0.00092 15.6 2.7 22 44-65 88-109 (111)
463 PF05096 Glu_cyclase_2: Glutam 39.9 69 0.0015 17.9 8.0 68 3-71 58-127 (264)
464 PF02870 Methyltransf_1N: 6-O- 38.1 38 0.00081 14.3 2.3 23 40-62 8-30 (77)
465 TIGR02608 delta_60_rpt delta-6 37.7 35 0.00076 13.9 4.7 17 35-51 3-19 (55)
466 cd03444 Thioesterase_II_repeat 37.5 47 0.001 15.2 5.0 50 5-54 47-102 (104)
467 PF06739 SBBP: Beta-propeller 37.2 29 0.00062 12.7 3.3 22 33-54 13-34 (38)
468 TIGR03606 non_repeat_PQQ dehyd 36.6 1E+02 0.0022 18.8 9.0 76 2-82 370-451 (454)
469 COG5276 Uncharacterized conser 36.5 89 0.0019 18.1 7.3 61 2-64 97-158 (370)
470 PHA03098 kelch-like protein; P 36.4 1E+02 0.0022 18.8 5.8 23 43-65 487-514 (534)
471 PF03022 MRJP: Major royal jel 35.6 83 0.0018 17.6 7.6 57 11-67 34-101 (287)
472 KOG0394|consensus 35.0 44 0.00096 17.7 1.8 16 50-65 80-95 (210)
473 PF05787 DUF839: Bacterial pro 33.8 1.2E+02 0.0026 18.9 3.8 20 30-49 499-518 (524)
474 COG3823 Glutamine cyclotransfe 33.5 87 0.0019 17.2 5.8 19 11-29 68-86 (262)
475 KOG2103|consensus 31.8 1.6E+02 0.0035 19.8 4.9 63 2-70 48-111 (910)
476 COG4993 Gcd Glucose dehydrogen 31.4 1.5E+02 0.0033 19.3 4.8 65 4-68 646-724 (773)
477 COG3204 Uncharacterized protei 31.2 1.1E+02 0.0024 17.6 6.6 61 4-64 100-160 (316)
478 PF15527 Toxin_47: Putative to 30.8 70 0.0015 15.2 2.5 10 51-60 16-25 (129)
479 KOG2714|consensus 30.5 1.3E+02 0.0028 18.4 3.3 61 5-65 239-309 (465)
480 COG0554 GlpK Glycerol kinase [ 30.4 65 0.0014 19.8 2.2 22 5-26 79-100 (499)
481 PRK03298 hypothetical protein; 30.3 1E+02 0.0022 16.9 4.2 26 38-63 47-72 (224)
482 COG3211 PhoX Predicted phospha 29.3 1.6E+02 0.0034 18.9 3.7 20 31-50 552-571 (616)
483 PF13964 Kelch_6: Kelch motif 29.0 46 0.00099 12.5 2.6 23 43-65 11-39 (50)
484 PF14157 YmzC: YmzC-like prote 28.5 60 0.0013 13.7 2.6 22 43-64 28-49 (63)
485 TIGR00189 tesB acyl-CoA thioes 27.9 1.1E+02 0.0024 16.6 6.0 51 6-56 214-270 (271)
486 PF13418 Kelch_4: Galactose ox 27.8 47 0.001 12.3 2.4 23 43-65 12-40 (49)
487 PF02381 MraZ: MraZ protein; 27.6 61 0.0013 13.6 2.7 18 3-20 31-48 (72)
488 PF09081 DUF1921: Domain of un 27.4 55 0.0012 13.0 2.3 13 48-60 39-51 (51)
489 KOG1900|consensus 27.2 2.4E+02 0.0051 20.2 4.3 33 31-63 241-273 (1311)
490 KOG3611|consensus 27.2 1.9E+02 0.0041 19.1 7.3 55 4-58 428-489 (737)
491 KOG0088|consensus 26.3 79 0.0017 16.4 1.9 18 48-65 82-99 (218)
492 COG5169 HSF1 Heat shock transc 26.3 1E+02 0.0023 17.4 2.4 18 35-52 27-44 (282)
493 PF11635 Med16: Mediator compl 25.3 2.1E+02 0.0045 18.9 5.1 38 33-70 260-297 (753)
494 COG1637 Predicted nuclease of 24.9 1.4E+02 0.003 16.7 4.1 27 37-63 72-98 (253)
495 PF01407 Gemini_AL3: Geminivir 24.9 35 0.00077 16.5 0.5 11 54-64 15-25 (120)
496 PRK04247 hypothetical protein; 24.7 1.4E+02 0.0029 16.6 7.1 25 38-62 72-96 (238)
497 KOG4469|consensus 24.3 95 0.0021 16.9 2.0 15 50-64 205-219 (391)
498 PLN02868 acyl-CoA thioesterase 23.4 1.7E+02 0.0038 17.3 6.0 21 35-55 392-412 (413)
499 KOG2063|consensus 22.7 1.4E+02 0.003 20.2 2.7 20 1-20 26-45 (877)
500 PRK05449 aspartate alpha-decar 22.3 1E+02 0.0022 15.2 1.8 16 55-70 43-58 (126)
No 1
>KOG0263|consensus
Probab=99.87 E-value=1.9e-21 Score=108.00 Aligned_cols=82 Identities=29% Similarity=0.536 Sum_probs=78.9
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEEE
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSLA 81 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~ 81 (85)
.++++|+.|.++++||+.++..++.+.+ |..+|.+++++|+|.++++|+.|+.|.+||+..++.+..+.+|.+.|.++.
T Consensus 548 ~Y~aTGSsD~tVRlWDv~~G~~VRiF~G-H~~~V~al~~Sp~Gr~LaSg~ed~~I~iWDl~~~~~v~~l~~Ht~ti~Sls 626 (707)
T KOG0263|consen 548 NYVATGSSDRTVRLWDVSTGNSVRIFTG-HKGPVTALAFSPCGRYLASGDEDGLIKIWDLANGSLVKQLKGHTGTIYSLS 626 (707)
T ss_pred cccccCCCCceEEEEEcCCCcEEEEecC-CCCceEEEEEcCCCceEeecccCCcEEEEEcCCCcchhhhhcccCceeEEE
Confidence 6799999999999999999999999987 999999999999999999999999999999999999999999999999999
Q ss_pred EeC
Q psy7058 82 FCD 84 (85)
Q Consensus 82 ~~~ 84 (85)
|+.
T Consensus 627 FS~ 629 (707)
T KOG0263|consen 627 FSR 629 (707)
T ss_pred Eec
Confidence 985
No 2
>KOG0271|consensus
Probab=99.87 E-value=1.5e-21 Score=102.55 Aligned_cols=84 Identities=32% Similarity=0.514 Sum_probs=78.3
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCcccc-ccccccccceeE
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVD-KEYSGHQKAITS 79 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~v~~ 79 (85)
|..|++|+-|.++++||..+..+....++ |...+.+++|+|||+.+++|+.||.|++||.++++++ ..+.+|...|++
T Consensus 127 g~~l~tGsGD~TvR~WD~~TeTp~~t~Kg-H~~WVlcvawsPDgk~iASG~~dg~I~lwdpktg~~~g~~l~gH~K~It~ 205 (480)
T KOG0271|consen 127 GSRLVTGSGDTTVRLWDLDTETPLFTCKG-HKNWVLCVAWSPDGKKIASGSKDGSIRLWDPKTGQQIGRALRGHKKWITA 205 (480)
T ss_pred CceEEecCCCceEEeeccCCCCcceeecC-CccEEEEEEECCCcchhhccccCCeEEEecCCCCCcccccccCcccceeE
Confidence 46899999999999999999999999988 8899999999999999999999999999999998766 679999999999
Q ss_pred EEEeCC
Q psy7058 80 LAFCDF 85 (85)
Q Consensus 80 ~~~~~~ 85 (85)
++|.|.
T Consensus 206 Lawep~ 211 (480)
T KOG0271|consen 206 LAWEPL 211 (480)
T ss_pred Eeeccc
Confidence 999873
No 3
>KOG0272|consensus
Probab=99.84 E-value=1.4e-20 Score=99.51 Aligned_cols=83 Identities=19% Similarity=0.326 Sum_probs=79.4
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEE
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSL 80 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~ 80 (85)
|.++++|+.|..-+|||++++..+.-+.+ |..+|..+.|+|+|-.+++|+.|++++|||++..+.+..+.+|...|..+
T Consensus 315 GSL~~tGGlD~~~RvWDlRtgr~im~L~g-H~k~I~~V~fsPNGy~lATgs~Dnt~kVWDLR~r~~ly~ipAH~nlVS~V 393 (459)
T KOG0272|consen 315 GSLAATGGLDSLGRVWDLRTGRCIMFLAG-HIKEILSVAFSPNGYHLATGSSDNTCKVWDLRMRSELYTIPAHSNLVSQV 393 (459)
T ss_pred CceeeccCccchhheeecccCcEEEEecc-cccceeeEeECCCceEEeecCCCCcEEEeeecccccceecccccchhhhe
Confidence 56789999999999999999999999988 99999999999999999999999999999999999999999999999999
Q ss_pred EEeC
Q psy7058 81 AFCD 84 (85)
Q Consensus 81 ~~~~ 84 (85)
+|+|
T Consensus 394 k~~p 397 (459)
T KOG0272|consen 394 KYSP 397 (459)
T ss_pred Eecc
Confidence 9987
No 4
>KOG0295|consensus
Probab=99.83 E-value=1.4e-19 Score=94.49 Aligned_cols=83 Identities=27% Similarity=0.495 Sum_probs=78.1
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEE
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSL 80 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~ 80 (85)
|+++.++++|++|++||+.++.++.++.+ |...|..++|+|.|++++++.+|+++++||++..++...+..|+.-++++
T Consensus 304 ~~~l~s~SrDktIk~wdv~tg~cL~tL~g-hdnwVr~~af~p~Gkyi~ScaDDktlrvwdl~~~~cmk~~~ah~hfvt~l 382 (406)
T KOG0295|consen 304 GQVLGSGSRDKTIKIWDVSTGMCLFTLVG-HDNWVRGVAFSPGGKYILSCADDKTLRVWDLKNLQCMKTLEAHEHFVTSL 382 (406)
T ss_pred ccEEEeecccceEEEEeccCCeEEEEEec-ccceeeeeEEcCCCeEEEEEecCCcEEEEEeccceeeeccCCCcceeEEE
Confidence 36889999999999999999999999998 88899999999999999999999999999999999999999999999999
Q ss_pred EEeC
Q psy7058 81 AFCD 84 (85)
Q Consensus 81 ~~~~ 84 (85)
.|+.
T Consensus 383 Dfh~ 386 (406)
T KOG0295|consen 383 DFHK 386 (406)
T ss_pred ecCC
Confidence 8853
No 5
>KOG0272|consensus
Probab=99.83 E-value=5.4e-21 Score=101.00 Aligned_cols=84 Identities=31% Similarity=0.420 Sum_probs=79.5
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEE
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSL 80 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~ 80 (85)
|++|++++.|.+.++||+.++.......+ |...+.+++|.+||..+++|+.|..-++||+++++++..+.+|..+|.++
T Consensus 273 G~~L~TasfD~tWRlWD~~tk~ElL~QEG-Hs~~v~~iaf~~DGSL~~tGGlD~~~RvWDlRtgr~im~L~gH~k~I~~V 351 (459)
T KOG0272|consen 273 GKFLGTASFDSTWRLWDLETKSELLLQEG-HSKGVFSIAFQPDGSLAATGGLDSLGRVWDLRTGRCIMFLAGHIKEILSV 351 (459)
T ss_pred CceeeecccccchhhcccccchhhHhhcc-cccccceeEecCCCceeeccCccchhheeecccCcEEEEecccccceeeE
Confidence 68999999999999999999888777766 88899999999999999999999999999999999999999999999999
Q ss_pred EEeCC
Q psy7058 81 AFCDF 85 (85)
Q Consensus 81 ~~~~~ 85 (85)
+|+|+
T Consensus 352 ~fsPN 356 (459)
T KOG0272|consen 352 AFSPN 356 (459)
T ss_pred eECCC
Confidence 99985
No 6
>KOG0302|consensus
Probab=99.83 E-value=1.1e-19 Score=95.26 Aligned_cols=83 Identities=20% Similarity=0.345 Sum_probs=70.7
Q ss_pred ceeEEeeCCCcEEEeeCCCcee--eeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCc---cccccccccccc
Q psy7058 2 GLLATTSADQTARIWNTEDFSL--VRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETG---EVDKEYSGHQKA 76 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~~~~~~~~~~ 76 (85)
+.+++|+.|+.|++||++.+.. ....+ .|+..|+-+.|+.+..++++|+.+|+++|||+++. +++..|..|..+
T Consensus 271 ~vfaScS~DgsIrIWDiRs~~~~~~~~~k-Ah~sDVNVISWnr~~~lLasG~DdGt~~iwDLR~~~~~~pVA~fk~Hk~p 349 (440)
T KOG0302|consen 271 GVFASCSCDGSIRIWDIRSGPKKAAVSTK-AHNSDVNVISWNRREPLLASGGDDGTLSIWDLRQFKSGQPVATFKYHKAP 349 (440)
T ss_pred ceEEeeecCceEEEEEecCCCccceeEee-ccCCceeeEEccCCcceeeecCCCceEEEEEhhhccCCCcceeEEeccCC
Confidence 4689999999999999998732 22223 48888999999998889999999999999999854 567789999999
Q ss_pred eeEEEEeCC
Q psy7058 77 ITSLAFCDF 85 (85)
Q Consensus 77 v~~~~~~~~ 85 (85)
|+++.|+|+
T Consensus 350 ItsieW~p~ 358 (440)
T KOG0302|consen 350 ITSIEWHPH 358 (440)
T ss_pred eeEEEeccc
Confidence 999999985
No 7
>KOG0279|consensus
Probab=99.83 E-value=1.4e-19 Score=91.87 Aligned_cols=82 Identities=21% Similarity=0.373 Sum_probs=75.7
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEEE
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSLA 81 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~ 81 (85)
..+++++.|+++++||+++.+....+.+ |...++.+.++|||..+++|+.|+.+.+||+++++.+..+. +...|++++
T Consensus 163 p~Ivs~s~DktvKvWnl~~~~l~~~~~g-h~~~v~t~~vSpDGslcasGgkdg~~~LwdL~~~k~lysl~-a~~~v~sl~ 240 (315)
T KOG0279|consen 163 PIIVSASWDKTVKVWNLRNCQLRTTFIG-HSGYVNTVTVSPDGSLCASGGKDGEAMLWDLNEGKNLYSLE-AFDIVNSLC 240 (315)
T ss_pred cEEEEccCCceEEEEccCCcchhhcccc-ccccEEEEEECCCCCEEecCCCCceEEEEEccCCceeEecc-CCCeEeeEE
Confidence 3588999999999999999888888777 88999999999999999999999999999999999988776 889999999
Q ss_pred EeCC
Q psy7058 82 FCDF 85 (85)
Q Consensus 82 ~~~~ 85 (85)
|+|.
T Consensus 241 fspn 244 (315)
T KOG0279|consen 241 FSPN 244 (315)
T ss_pred ecCC
Confidence 9984
No 8
>KOG0266|consensus
Probab=99.82 E-value=4.8e-19 Score=96.89 Aligned_cols=83 Identities=34% Similarity=0.623 Sum_probs=76.2
Q ss_pred CceeEEeeCCCcEEEeeCC-CceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeE
Q psy7058 1 MGLLATTSADQTARIWNTE-DFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITS 79 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~ 79 (85)
|+++++++.|.++++||+. .+..++.+.+ |...+++++|+|+++.+++|+.|++|++||++.+++...+.+|.+.|.+
T Consensus 215 ~~~l~s~s~D~tiriwd~~~~~~~~~~l~g-H~~~v~~~~f~p~g~~i~Sgs~D~tvriWd~~~~~~~~~l~~hs~~is~ 293 (456)
T KOG0266|consen 215 GSYLLSGSDDKTLRIWDLKDDGRNLKTLKG-HSTYVTSVAFSPDGNLLVSGSDDGTVRIWDVRTGECVRKLKGHSDGISG 293 (456)
T ss_pred CcEEEEecCCceEEEeeccCCCeEEEEecC-CCCceEEEEecCCCCEEEEecCCCcEEEEeccCCeEEEeeeccCCceEE
Confidence 4579999999999999994 4477777776 9999999999999999999999999999999999999999999999999
Q ss_pred EEEeC
Q psy7058 80 LAFCD 84 (85)
Q Consensus 80 ~~~~~ 84 (85)
++|++
T Consensus 294 ~~f~~ 298 (456)
T KOG0266|consen 294 LAFSP 298 (456)
T ss_pred EEECC
Confidence 99986
No 9
>KOG0286|consensus
Probab=99.80 E-value=1.6e-18 Score=88.63 Aligned_cols=83 Identities=22% Similarity=0.418 Sum_probs=79.0
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecC-CCCEEEEEcCCCeEEEEEcCCccccccccccccceeEE
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTL-DSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSL 80 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~ 80 (85)
+.|++++-|.+..+||+++++....+.+ |...|.++.++| +++.+++|+-|+..++||++.+.+.++|.+|+..|+++
T Consensus 157 ~~ilT~SGD~TCalWDie~g~~~~~f~G-H~gDV~slsl~p~~~ntFvSg~cD~~aklWD~R~~~c~qtF~ghesDINsv 235 (343)
T KOG0286|consen 157 NHILTGSGDMTCALWDIETGQQTQVFHG-HTGDVMSLSLSPSDGNTFVSGGCDKSAKLWDVRSGQCVQTFEGHESDINSV 235 (343)
T ss_pred CceEecCCCceEEEEEcccceEEEEecC-CcccEEEEecCCCCCCeEEecccccceeeeeccCcceeEeecccccccceE
Confidence 4689999999999999999999999988 888999999999 99999999999999999999999999999999999999
Q ss_pred EEeCC
Q psy7058 81 AFCDF 85 (85)
Q Consensus 81 ~~~~~ 85 (85)
+|.|.
T Consensus 236 ~ffP~ 240 (343)
T KOG0286|consen 236 RFFPS 240 (343)
T ss_pred EEccC
Confidence 99984
No 10
>KOG0284|consensus
Probab=99.79 E-value=2.9e-19 Score=94.45 Aligned_cols=82 Identities=29% Similarity=0.479 Sum_probs=78.3
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEEE
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSLA 81 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~ 81 (85)
.++++++.|..+++||.+++.++.++.. |...|..+.|++++.+|++++.|..++++|++..+.++.+++|+..++++.
T Consensus 235 gLiasgskDnlVKlWDprSg~cl~tlh~-HKntVl~~~f~~n~N~Llt~skD~~~kv~DiR~mkEl~~~r~Hkkdv~~~~ 313 (464)
T KOG0284|consen 235 GLIASGSKDNLVKLWDPRSGSCLATLHG-HKNTVLAVKFNPNGNWLLTGSKDQSCKVFDIRTMKELFTYRGHKKDVTSLT 313 (464)
T ss_pred ceeEEccCCceeEeecCCCcchhhhhhh-ccceEEEEEEcCCCCeeEEccCCceEEEEehhHhHHHHHhhcchhhheeec
Confidence 4689999999999999999999999887 888899999999999999999999999999999999999999999999999
Q ss_pred EeC
Q psy7058 82 FCD 84 (85)
Q Consensus 82 ~~~ 84 (85)
|+|
T Consensus 314 WhP 316 (464)
T KOG0284|consen 314 WHP 316 (464)
T ss_pred ccc
Confidence 988
No 11
>KOG0271|consensus
Probab=99.79 E-value=1.5e-18 Score=91.46 Aligned_cols=84 Identities=18% Similarity=0.456 Sum_probs=80.2
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEE
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSL 80 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~ 80 (85)
+.++++++-|..+++||.++++.+..+++ |...+..++|+-|.+++++++.|.++++|++++.+....+.+|.+.|+++
T Consensus 379 ~r~IASaSFDkSVkLW~g~tGk~lasfRG-Hv~~VYqvawsaDsRLlVS~SkDsTLKvw~V~tkKl~~DLpGh~DEVf~v 457 (480)
T KOG0271|consen 379 GRYIASASFDKSVKLWDGRTGKFLASFRG-HVAAVYQVAWSADSRLLVSGSKDSTLKVWDVRTKKLKQDLPGHADEVFAV 457 (480)
T ss_pred ccEEEEeecccceeeeeCCCcchhhhhhh-ccceeEEEEeccCccEEEEcCCCceEEEEEeeeeeecccCCCCCceEEEE
Confidence 46899999999999999999999999998 88899999999999999999999999999999999999999999999999
Q ss_pred EEeCC
Q psy7058 81 AFCDF 85 (85)
Q Consensus 81 ~~~~~ 85 (85)
.|+|.
T Consensus 458 DwspD 462 (480)
T KOG0271|consen 458 DWSPD 462 (480)
T ss_pred EecCC
Confidence 99984
No 12
>KOG0264|consensus
Probab=99.78 E-value=4e-18 Score=90.52 Aligned_cols=83 Identities=19% Similarity=0.336 Sum_probs=70.4
Q ss_pred ceeEEeeCCCcEEEeeCCC--ceeeeeeeccCCCcEEEEEecC-CCCEEEEEcCCCeEEEEEcCCcc-ccccccccccce
Q psy7058 2 GLLATTSADQTARIWNTED--FSLVRELGTANQRWVWDAAFTL-DSKFLLTASSDGVARLWNIETGE-VDKEYSGHQKAI 77 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~v 77 (85)
+++++++.|+.+.+||+++ .++.....+ |...+++++|+| ++..+|+++.|++|.+||+++.+ ++-++.+|...|
T Consensus 241 ~lF~sv~dd~~L~iwD~R~~~~~~~~~~~a-h~~~vn~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~~~lh~~e~H~dev 319 (422)
T KOG0264|consen 241 DLFGSVGDDGKLMIWDTRSNTSKPSHSVKA-HSAEVNCVAFNPFNEFILATGSADKTVALWDLRNLNKPLHTFEGHEDEV 319 (422)
T ss_pred hhheeecCCCeEEEEEcCCCCCCCcccccc-cCCceeEEEeCCCCCceEEeccCCCcEEEeechhcccCceeccCCCcce
Confidence 4578999999999999995 333344444 889999999999 67788999999999999999864 567889999999
Q ss_pred eEEEEeCC
Q psy7058 78 TSLAFCDF 85 (85)
Q Consensus 78 ~~~~~~~~ 85 (85)
..+.|+|+
T Consensus 320 ~~V~WSPh 327 (422)
T KOG0264|consen 320 FQVEWSPH 327 (422)
T ss_pred EEEEeCCC
Confidence 99999996
No 13
>KOG0266|consensus
Probab=99.77 E-value=1.7e-17 Score=90.93 Aligned_cols=84 Identities=36% Similarity=0.540 Sum_probs=74.5
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCcc--ccccccccccc--
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGE--VDKEYSGHQKA-- 76 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~-- 76 (85)
|+++++|+.|++|++||++++++...+.. |...++.+++++++..+++++.|+.+++||+.++. +...+..+..+
T Consensus 258 g~~i~Sgs~D~tvriWd~~~~~~~~~l~~-hs~~is~~~f~~d~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~ 336 (456)
T KOG0266|consen 258 GNLLVSGSDDGTVRIWDVRTGECVRKLKG-HSDGISGLAFSPDGNLLVSASYDGTIRVWDLETGSKLCLKLLSGAENSAP 336 (456)
T ss_pred CCEEEEecCCCcEEEEeccCCeEEEeeec-cCCceEEEEECCCCCEEEEcCCCccEEEEECCCCceeeeecccCCCCCCc
Confidence 46899999999999999999999999988 88899999999999999999999999999999988 45666655544
Q ss_pred eeEEEEeCC
Q psy7058 77 ITSLAFCDF 85 (85)
Q Consensus 77 v~~~~~~~~ 85 (85)
++++.|+|.
T Consensus 337 ~~~~~fsp~ 345 (456)
T KOG0266|consen 337 VTSVQFSPN 345 (456)
T ss_pred eeEEEECCC
Confidence 899999874
No 14
>PTZ00421 coronin; Provisional
Probab=99.77 E-value=2.6e-17 Score=90.76 Aligned_cols=83 Identities=25% Similarity=0.295 Sum_probs=71.5
Q ss_pred ceeEEeeCCCcEEEeeCCCce-------eeeeeeccCCCcEEEEEecCCC-CEEEEEcCCCeEEEEEcCCcccccccccc
Q psy7058 2 GLLATTSADQTARIWNTEDFS-------LVRELGTANQRWVWDAAFTLDS-KFLLTASSDGVARLWNIETGEVDKEYSGH 73 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~-------~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 73 (85)
++|++++.|+.|++||+.+.. +...+.+ |...|.++.|+|++ ..+++++.|+.|++||+..++....+..|
T Consensus 89 ~~LaSgS~DgtIkIWdi~~~~~~~~~~~~l~~L~g-H~~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~tg~~~~~l~~h 167 (493)
T PTZ00421 89 QKLFTASEDGTIMGWGIPEEGLTQNISDPIVHLQG-HTKKVGIVSFHPSAMNVLASAGADMVVNVWDVERGKAVEVIKCH 167 (493)
T ss_pred CEEEEEeCCCEEEEEecCCCccccccCcceEEecC-CCCcEEEEEeCcCCCCEEEEEeCCCEEEEEECCCCeEEEEEcCC
Confidence 579999999999999997642 3444554 77889999999975 68999999999999999999888888889
Q ss_pred ccceeEEEEeCC
Q psy7058 74 QKAITSLAFCDF 85 (85)
Q Consensus 74 ~~~v~~~~~~~~ 85 (85)
...|.+++|+|.
T Consensus 168 ~~~V~sla~spd 179 (493)
T PTZ00421 168 SDQITSLEWNLD 179 (493)
T ss_pred CCceEEEEEECC
Confidence 999999999874
No 15
>KOG0284|consensus
Probab=99.77 E-value=3.8e-18 Score=90.31 Aligned_cols=83 Identities=20% Similarity=0.312 Sum_probs=77.3
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEEE
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSLA 81 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~ 81 (85)
..+++++.|+.|++||....+....+.+ |...+.+++|+|....+++++.|..|++||.+++.++.++.+|+..|..++
T Consensus 193 skF~t~SdDg~ikiWdf~~~kee~vL~G-HgwdVksvdWHP~kgLiasgskDnlVKlWDprSg~cl~tlh~HKntVl~~~ 271 (464)
T KOG0284|consen 193 SKFLTCSDDGTIKIWDFRMPKEERVLRG-HGWDVKSVDWHPTKGLIASGSKDNLVKLWDPRSGSCLATLHGHKNTVLAVK 271 (464)
T ss_pred ceeEEecCCCeEEEEeccCCchhheecc-CCCCcceeccCCccceeEEccCCceeEeecCCCcchhhhhhhccceEEEEE
Confidence 3579999999999999998888777776 888899999999999999999999999999999999999999999999999
Q ss_pred EeCC
Q psy7058 82 FCDF 85 (85)
Q Consensus 82 ~~~~ 85 (85)
|+|+
T Consensus 272 f~~n 275 (464)
T KOG0284|consen 272 FNPN 275 (464)
T ss_pred EcCC
Confidence 9884
No 16
>KOG0316|consensus
Probab=99.76 E-value=7.9e-18 Score=84.35 Aligned_cols=83 Identities=25% Similarity=0.517 Sum_probs=79.1
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEE
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSL 80 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~ 80 (85)
|++.++++.|.++++|+...+..+.++.+ |...+..++.+.|...+++++.|+.+.+||+.+++..+.+.+|...|+.+
T Consensus 29 GnY~ltcGsdrtvrLWNp~rg~liktYsg-hG~EVlD~~~s~Dnskf~s~GgDk~v~vwDV~TGkv~Rr~rgH~aqVNtV 107 (307)
T KOG0316|consen 29 GNYCLTCGSDRTVRLWNPLRGALIKTYSG-HGHEVLDAALSSDNSKFASCGGDKAVQVWDVNTGKVDRRFRGHLAQVNTV 107 (307)
T ss_pred CCEEEEcCCCceEEeecccccceeeeecC-CCceeeeccccccccccccCCCCceEEEEEcccCeeeeecccccceeeEE
Confidence 68999999999999999999999999988 88889999999999999999999999999999999999999999999999
Q ss_pred EEeC
Q psy7058 81 AFCD 84 (85)
Q Consensus 81 ~~~~ 84 (85)
+||.
T Consensus 108 ~fNe 111 (307)
T KOG0316|consen 108 RFNE 111 (307)
T ss_pred EecC
Confidence 9985
No 17
>KOG0263|consensus
Probab=99.76 E-value=3.4e-18 Score=95.43 Aligned_cols=84 Identities=35% Similarity=0.524 Sum_probs=77.9
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEE
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSL 80 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~ 80 (85)
|-++|+++.|++.++|......+.+.+.+ |...+.|+.|+|+..++++|+.|.++++||+.++..++.|.+|.++|.++
T Consensus 505 GyYFatas~D~tArLWs~d~~~PlRifag-hlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~~VRiF~GH~~~V~al 583 (707)
T KOG0263|consen 505 GYYFATASHDQTARLWSTDHNKPLRIFAG-HLSDVDCVSFHPNSNYVATGSSDRTVRLWDVSTGNSVRIFTGHKGPVTAL 583 (707)
T ss_pred ceEEEecCCCceeeeeecccCCchhhhcc-cccccceEEECCcccccccCCCCceEEEEEcCCCcEEEEecCCCCceEEE
Confidence 45789999999999999998788777776 87889999999999999999999999999999999999999999999999
Q ss_pred EEeCC
Q psy7058 81 AFCDF 85 (85)
Q Consensus 81 ~~~~~ 85 (85)
+|+|.
T Consensus 584 ~~Sp~ 588 (707)
T KOG0263|consen 584 AFSPC 588 (707)
T ss_pred EEcCC
Confidence 99984
No 18
>KOG1273|consensus
Probab=99.75 E-value=1.2e-17 Score=86.52 Aligned_cols=82 Identities=22% Similarity=0.321 Sum_probs=73.5
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEE
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSL 80 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~ 80 (85)
|.+||.|..+|.+.+||+.+....+.+.+ |..+|.+++|+++|+.+++++.|..+.+||+..+.++..+. ...+|..+
T Consensus 35 G~~lAvGc~nG~vvI~D~~T~~iar~lsa-H~~pi~sl~WS~dgr~LltsS~D~si~lwDl~~gs~l~rir-f~spv~~~ 112 (405)
T KOG1273|consen 35 GDYLAVGCANGRVVIYDFDTFRIARMLSA-HVRPITSLCWSRDGRKLLTSSRDWSIKLWDLLKGSPLKRIR-FDSPVWGA 112 (405)
T ss_pred cceeeeeccCCcEEEEEccccchhhhhhc-cccceeEEEecCCCCEeeeecCCceeEEEeccCCCceeEEE-ccCcccee
Confidence 67899999999999999998886666665 88899999999999999999999999999999999888777 67888888
Q ss_pred EEeC
Q psy7058 81 AFCD 84 (85)
Q Consensus 81 ~~~~ 84 (85)
.|+|
T Consensus 113 q~hp 116 (405)
T KOG1273|consen 113 QWHP 116 (405)
T ss_pred eecc
Confidence 8877
No 19
>KOG0279|consensus
Probab=99.74 E-value=9.6e-17 Score=81.76 Aligned_cols=84 Identities=20% Similarity=0.273 Sum_probs=71.5
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccc-cccceeE
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSG-HQKAITS 79 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~v~~ 79 (85)
|++.++++.|+.+++||+.++++..++.+ |...+.++++++|.+.+++|+.|++|.+|++........... +.+=|.+
T Consensus 75 g~~alS~swD~~lrlWDl~~g~~t~~f~G-H~~dVlsva~s~dn~qivSGSrDkTiklwnt~g~ck~t~~~~~~~~WVsc 153 (315)
T KOG0279|consen 75 GNFALSASWDGTLRLWDLATGESTRRFVG-HTKDVLSVAFSTDNRQIVSGSRDKTIKLWNTLGVCKYTIHEDSHREWVSC 153 (315)
T ss_pred CceEEeccccceEEEEEecCCcEEEEEEe-cCCceEEEEecCCCceeecCCCcceeeeeeecccEEEEEecCCCcCcEEE
Confidence 57889999999999999999999888888 888899999999999999999999999999975443322222 2678999
Q ss_pred EEEeCC
Q psy7058 80 LAFCDF 85 (85)
Q Consensus 80 ~~~~~~ 85 (85)
+.|+|.
T Consensus 154 vrfsP~ 159 (315)
T KOG0279|consen 154 VRFSPN 159 (315)
T ss_pred EEEcCC
Confidence 999984
No 20
>KOG0277|consensus
Probab=99.73 E-value=8.9e-17 Score=81.23 Aligned_cols=84 Identities=21% Similarity=0.347 Sum_probs=72.4
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecC-CCCEEEEEcCCCeEEEEEcCCcc-cccccccccccee
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTL-DSKFLLTASSDGVARLWNIETGE-VDKEYSGHQKAIT 78 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~v~ 78 (85)
++.+++++.|+.+++||++..-....+.. |...+.++.|+. +...+++++.|+.|+.||+++.+ ++..+.+|+-+|+
T Consensus 160 ~nlfas~Sgd~~l~lwdvr~~gk~~~i~a-h~~Eil~cdw~ky~~~vl~Tg~vd~~vr~wDir~~r~pl~eL~gh~~AVR 238 (311)
T KOG0277|consen 160 PNLFASASGDGTLRLWDVRSPGKFMSIEA-HNSEILCCDWSKYNHNVLATGGVDNLVRGWDIRNLRTPLFELNGHGLAVR 238 (311)
T ss_pred CCeEEEccCCceEEEEEecCCCceeEEEe-ccceeEeecccccCCcEEEecCCCceEEEEehhhccccceeecCCceEEE
Confidence 36789999999999999987655555666 777899999998 77889999999999999999865 5678899999999
Q ss_pred EEEEeCC
Q psy7058 79 SLAFCDF 85 (85)
Q Consensus 79 ~~~~~~~ 85 (85)
.++|||+
T Consensus 239 kvk~Sph 245 (311)
T KOG0277|consen 239 KVKFSPH 245 (311)
T ss_pred EEecCcc
Confidence 9999995
No 21
>PTZ00421 coronin; Provisional
Probab=99.73 E-value=2.2e-16 Score=87.13 Aligned_cols=74 Identities=22% Similarity=0.338 Sum_probs=65.7
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccc
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKA 76 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 76 (85)
++|++++.|+.|++||+.+++....+.. +...+.++.|+|++..+++++.|+.|++||+++++.+..+..|...
T Consensus 139 ~iLaSgs~DgtVrIWDl~tg~~~~~l~~-h~~~V~sla~spdG~lLatgs~Dg~IrIwD~rsg~~v~tl~~H~~~ 212 (493)
T PTZ00421 139 NVLASAGADMVVNVWDVERGKAVEVIKC-HSDQITSLEWNLDGSLLCTTSKDKKLNIIDPRDGTIVSSVEAHASA 212 (493)
T ss_pred CEEEEEeCCCEEEEEECCCCeEEEEEcC-CCCceEEEEEECCCCEEEEecCCCEEEEEECCCCcEEEEEecCCCC
Confidence 4789999999999999999888777766 7778999999999999999999999999999999887777777643
No 22
>KOG0286|consensus
Probab=99.73 E-value=7.5e-17 Score=82.69 Aligned_cols=83 Identities=20% Similarity=0.308 Sum_probs=73.9
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccc--ccccee
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSG--HQKAIT 78 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~--~~~~v~ 78 (85)
++.+++|+.|...++||++.+..+..+.+ |...|+.++|.|+|.-+++|++|++.++||++..+.+..+.. ...+|+
T Consensus 199 ~ntFvSg~cD~~aklWD~R~~~c~qtF~g-hesDINsv~ffP~G~afatGSDD~tcRlyDlRaD~~~a~ys~~~~~~git 277 (343)
T KOG0286|consen 199 GNTFVSGGCDKSAKLWDVRSGQCVQTFEG-HESDINSVRFFPSGDAFATGSDDATCRLYDLRADQELAVYSHDSIICGIT 277 (343)
T ss_pred CCeEEecccccceeeeeccCcceeEeecc-cccccceEEEccCCCeeeecCCCceeEEEeecCCcEEeeeccCcccCCce
Confidence 46789999999999999999999999988 888899999999999999999999999999999888777763 235788
Q ss_pred EEEEeC
Q psy7058 79 SLAFCD 84 (85)
Q Consensus 79 ~~~~~~ 84 (85)
+++||-
T Consensus 278 Sv~FS~ 283 (343)
T KOG0286|consen 278 SVAFSK 283 (343)
T ss_pred eEEEcc
Confidence 888874
No 23
>KOG0273|consensus
Probab=99.72 E-value=9.6e-17 Score=86.30 Aligned_cols=84 Identities=27% Similarity=0.452 Sum_probs=75.8
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCC---------EEEEEcCCCeEEEEEcCCcccccccc
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSK---------FLLTASSDGVARLWNIETGEVDKEYS 71 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~i~~~~~~~~~~~~~~~ 71 (85)
|.+|++++.|+++++|+.........+.. |...|..+.|+|++. .+++++.|+++++||+..+.++.+|.
T Consensus 371 g~LLaS~SdD~TlkiWs~~~~~~~~~l~~-Hskei~t~~wsp~g~v~~n~~~~~~l~sas~dstV~lwdv~~gv~i~~f~ 449 (524)
T KOG0273|consen 371 GSLLASCSDDGTLKIWSMGQSNSVHDLQA-HSKEIYTIKWSPTGPVTSNPNMNLMLASASFDSTVKLWDVESGVPIHTLM 449 (524)
T ss_pred CceEEEecCCCeeEeeecCCCcchhhhhh-hccceeeEeecCCCCccCCCcCCceEEEeecCCeEEEEEccCCceeEeec
Confidence 56899999999999999888888888887 888899999988643 68999999999999999999999999
Q ss_pred ccccceeEEEEeCC
Q psy7058 72 GHQKAITSLAFCDF 85 (85)
Q Consensus 72 ~~~~~v~~~~~~~~ 85 (85)
.|+.+|++++|+|.
T Consensus 450 kH~~pVysvafS~~ 463 (524)
T KOG0273|consen 450 KHQEPVYSVAFSPN 463 (524)
T ss_pred cCCCceEEEEecCC
Confidence 99999999999984
No 24
>KOG0283|consensus
Probab=99.71 E-value=1.2e-16 Score=89.84 Aligned_cols=81 Identities=25% Similarity=0.465 Sum_probs=70.2
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecC-CCCEEEEEcCCCeEEEEEcCCccccccccccccceeEE
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTL-DSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSL 80 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~ 80 (85)
++|+++++|.++++|++...+++..+. |...|+|++|+| |.++|++|+.|+.++||++...+...-.. -.+.|+++
T Consensus 381 ~fLLSSSMDKTVRLWh~~~~~CL~~F~--HndfVTcVaFnPvDDryFiSGSLD~KvRiWsI~d~~Vv~W~D-l~~lITAv 457 (712)
T KOG0283|consen 381 NFLLSSSMDKTVRLWHPGRKECLKVFS--HNDFVTCVAFNPVDDRYFISGSLDGKVRLWSISDKKVVDWND-LRDLITAV 457 (712)
T ss_pred CeeEeccccccEEeecCCCcceeeEEe--cCCeeEEEEecccCCCcEeecccccceEEeecCcCeeEeehh-hhhhheeE
Confidence 689999999999999999888888876 889999999999 88999999999999999998776554333 34788888
Q ss_pred EEeCC
Q psy7058 81 AFCDF 85 (85)
Q Consensus 81 ~~~~~ 85 (85)
+|.|.
T Consensus 458 cy~Pd 462 (712)
T KOG0283|consen 458 CYSPD 462 (712)
T ss_pred EeccC
Confidence 88874
No 25
>KOG2394|consensus
Probab=99.71 E-value=5.7e-17 Score=88.46 Aligned_cols=84 Identities=23% Similarity=0.358 Sum_probs=76.7
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEE
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSL 80 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~ 80 (85)
|++||+.++|+.++|||..+.+....++. +-+.+.|++|+|||+++++|++|-.|.+|.+...+.+..-++|+.=|..+
T Consensus 302 G~~LA~VSqDGfLRvF~fdt~eLlg~mkS-YFGGLLCvcWSPDGKyIvtGGEDDLVtVwSf~erRVVARGqGHkSWVs~V 380 (636)
T KOG2394|consen 302 GKYLATVSQDGFLRIFDFDTQELLGVMKS-YFGGLLCVCWSPDGKYIVTGGEDDLVTVWSFEERRVVARGQGHKSWVSVV 380 (636)
T ss_pred CceEEEEecCceEEEeeccHHHHHHHHHh-hccceEEEEEcCCccEEEecCCcceEEEEEeccceEEEeccccccceeeE
Confidence 67899999999999999998887776665 66679999999999999999999999999999999888888999999999
Q ss_pred EEeCC
Q psy7058 81 AFCDF 85 (85)
Q Consensus 81 ~~~~~ 85 (85)
+|.||
T Consensus 381 aFDpy 385 (636)
T KOG2394|consen 381 AFDPY 385 (636)
T ss_pred eeccc
Confidence 99875
No 26
>KOG0285|consensus
Probab=99.71 E-value=2e-16 Score=83.18 Aligned_cols=82 Identities=27% Similarity=0.419 Sum_probs=77.6
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEEE
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSLA 81 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~ 81 (85)
+++++|+.|+++++||+.+++...++.+ |...+..+++++...++++++.|+.|+.||+...+.++.+-+|-..|++++
T Consensus 164 ~wf~tgs~DrtikIwDlatg~LkltltG-hi~~vr~vavS~rHpYlFs~gedk~VKCwDLe~nkvIR~YhGHlS~V~~L~ 242 (460)
T KOG0285|consen 164 EWFATGSADRTIKIWDLATGQLKLTLTG-HIETVRGVAVSKRHPYLFSAGEDKQVKCWDLEYNKVIRHYHGHLSGVYCLD 242 (460)
T ss_pred eeEEecCCCceeEEEEcccCeEEEeecc-hhheeeeeeecccCceEEEecCCCeeEEEechhhhhHHHhccccceeEEEe
Confidence 6799999999999999999999988887 888899999999999999999999999999999999999999999999998
Q ss_pred EeC
Q psy7058 82 FCD 84 (85)
Q Consensus 82 ~~~ 84 (85)
.+|
T Consensus 243 lhP 245 (460)
T KOG0285|consen 243 LHP 245 (460)
T ss_pred ccc
Confidence 876
No 27
>KOG0315|consensus
Probab=99.70 E-value=5.1e-16 Score=78.41 Aligned_cols=83 Identities=49% Similarity=0.891 Sum_probs=73.2
Q ss_pred CceeEEeeCCCcEEEeeCCCc-eeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeE
Q psy7058 1 MGLLATTSADQTARIWNTEDF-SLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITS 79 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~ 79 (85)
+++|++++.|.++++|++.+. +....+.+ ++..++...|+-|+.++++++.|+.+++|++..++.+..+.+|..+..|
T Consensus 227 ~k~lat~ssdktv~iwn~~~~~kle~~l~g-h~rWvWdc~FS~dg~YlvTassd~~~rlW~~~~~k~v~qy~gh~K~~vc 305 (311)
T KOG0315|consen 227 VKYLATCSSDKTVKIWNTDDFFKLELVLTG-HQRWVWDCAFSADGEYLVTASSDHTARLWDLSAGKEVRQYQGHHKAAVC 305 (311)
T ss_pred CcEEEeecCCceEEEEecCCceeeEEEeec-CCceEEeeeeccCccEEEecCCCCceeecccccCceeeecCCcccccEE
Confidence 468999999999999999987 44444444 7789999999999999999999999999999999999999999998888
Q ss_pred EEEeC
Q psy7058 80 LAFCD 84 (85)
Q Consensus 80 ~~~~~ 84 (85)
++.+.
T Consensus 306 ~~ln~ 310 (311)
T KOG0315|consen 306 VALND 310 (311)
T ss_pred EEeeC
Confidence 87654
No 28
>KOG0281|consensus
Probab=99.70 E-value=3.3e-17 Score=86.01 Aligned_cols=80 Identities=26% Similarity=0.562 Sum_probs=73.7
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEEE
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSLA 81 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~ 81 (85)
+++++++.|.+|++|++.+++.++.+.+ |...|.|+.+ .++++++|++|.+|++||+..|.+++.+++|++-|+++.
T Consensus 331 kyIVsASgDRTikvW~~st~efvRtl~g-HkRGIAClQY--r~rlvVSGSSDntIRlwdi~~G~cLRvLeGHEeLvRciR 407 (499)
T KOG0281|consen 331 KYIVSASGDRTIKVWSTSTCEFVRTLNG-HKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIR 407 (499)
T ss_pred ceEEEecCCceEEEEeccceeeehhhhc-ccccceehhc--cCeEEEecCCCceEEEEeccccHHHHHHhchHHhhhhee
Confidence 5789999999999999999999999988 8777888766 799999999999999999999999999999999999999
Q ss_pred EeC
Q psy7058 82 FCD 84 (85)
Q Consensus 82 ~~~ 84 (85)
|+.
T Consensus 408 Fd~ 410 (499)
T KOG0281|consen 408 FDN 410 (499)
T ss_pred ecC
Confidence 864
No 29
>KOG0285|consensus
Probab=99.70 E-value=3e-16 Score=82.52 Aligned_cols=82 Identities=23% Similarity=0.392 Sum_probs=76.0
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEEE
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSLA 81 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~ 81 (85)
..|++|++|..+++||+++...+..+.+ |..++..+.+.|-...+++++.|++|++||++.++...++-.|...+++++
T Consensus 248 dvl~t~grDst~RvWDiRtr~~V~~l~G-H~~~V~~V~~~~~dpqvit~S~D~tvrlWDl~agkt~~tlt~hkksvral~ 326 (460)
T KOG0285|consen 248 DVLVTGGRDSTIRVWDIRTRASVHVLSG-HTNPVASVMCQPTDPQVITGSHDSTVRLWDLRAGKTMITLTHHKKSVRALC 326 (460)
T ss_pred eeEEecCCcceEEEeeecccceEEEecC-CCCcceeEEeecCCCceEEecCCceEEEeeeccCceeEeeecccceeeEEe
Confidence 4689999999999999999999999888 889999999999888999999999999999999999988888999999998
Q ss_pred EeC
Q psy7058 82 FCD 84 (85)
Q Consensus 82 ~~~ 84 (85)
.+|
T Consensus 327 lhP 329 (460)
T KOG0285|consen 327 LHP 329 (460)
T ss_pred cCC
Confidence 876
No 30
>KOG0273|consensus
Probab=99.70 E-value=4.1e-16 Score=83.95 Aligned_cols=81 Identities=28% Similarity=0.513 Sum_probs=73.7
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEEE
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSLA 81 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~ 81 (85)
..+++++.|.++++||+..+.++..+.. |..+|.+++|+|+|+++++|+.|+.|.+|+++.++..+.+. ....|..++
T Consensus 423 ~~l~sas~dstV~lwdv~~gv~i~~f~k-H~~pVysvafS~~g~ylAsGs~dg~V~iws~~~~~l~~s~~-~~~~Ifel~ 500 (524)
T KOG0273|consen 423 LMLASASFDSTVKLWDVESGVPIHTLMK-HQEPVYSVAFSPNGRYLASGSLDGCVHIWSTKTGKLVKSYQ-GTGGIFELC 500 (524)
T ss_pred ceEEEeecCCeEEEEEccCCceeEeecc-CCCceEEEEecCCCcEEEecCCCCeeEeccccchheeEeec-CCCeEEEEE
Confidence 4689999999999999999999999876 88999999999999999999999999999999999988887 456688888
Q ss_pred EeC
Q psy7058 82 FCD 84 (85)
Q Consensus 82 ~~~ 84 (85)
|+-
T Consensus 501 Wn~ 503 (524)
T KOG0273|consen 501 WNA 503 (524)
T ss_pred EcC
Confidence 863
No 31
>KOG0319|consensus
Probab=99.69 E-value=3.3e-16 Score=87.72 Aligned_cols=82 Identities=33% Similarity=0.579 Sum_probs=77.7
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEEE
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSLA 81 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~ 81 (85)
+.+++++.|.++++|.+.+..+..++.+ |...|..+.|-.++..+++++.||.+++|++++..++.++.+|++.|..++
T Consensus 518 q~laT~SgD~TvKIW~is~fSClkT~eG-H~~aVlra~F~~~~~qliS~~adGliKlWnikt~eC~~tlD~H~DrvWaL~ 596 (775)
T KOG0319|consen 518 QLLATCSGDKTVKIWSISTFSCLKTFEG-HTSAVLRASFIRNGKQLISAGADGLIKLWNIKTNECEMTLDAHNDRVWALS 596 (775)
T ss_pred ceeEeccCCceEEEEEeccceeeeeecC-ccceeEeeeeeeCCcEEEeccCCCcEEEEeccchhhhhhhhhccceeEEEe
Confidence 4689999999999999999999999998 888999999999999999999999999999999999999999999999988
Q ss_pred EeC
Q psy7058 82 FCD 84 (85)
Q Consensus 82 ~~~ 84 (85)
-+|
T Consensus 597 ~~~ 599 (775)
T KOG0319|consen 597 VSP 599 (775)
T ss_pred ecC
Confidence 765
No 32
>KOG0319|consensus
Probab=99.69 E-value=5.4e-16 Score=86.87 Aligned_cols=81 Identities=35% Similarity=0.611 Sum_probs=75.5
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEEE
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSLA 81 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~ 81 (85)
.+++||++|.+.++|+++.......+.+ |...++++.|++..+.+++++.|++|+||.+.+..+++++.+|...|.-++
T Consensus 476 kLiAT~SqDktaKiW~le~~~l~~vLsG-H~RGvw~V~Fs~~dq~laT~SgD~TvKIW~is~fSClkT~eGH~~aVlra~ 554 (775)
T KOG0319|consen 476 KLIATGSQDKTAKIWDLEQLRLLGVLSG-HTRGVWCVSFSKNDQLLATCSGDKTVKIWSISTFSCLKTFEGHTSAVLRAS 554 (775)
T ss_pred ceEEecccccceeeecccCceEEEEeeC-CccceEEEEeccccceeEeccCCceEEEEEeccceeeeeecCccceeEeee
Confidence 4689999999999999998888888888 888899999999999999999999999999999999999999999998887
Q ss_pred Ee
Q psy7058 82 FC 83 (85)
Q Consensus 82 ~~ 83 (85)
|-
T Consensus 555 F~ 556 (775)
T KOG0319|consen 555 FI 556 (775)
T ss_pred ee
Confidence 73
No 33
>KOG0645|consensus
Probab=99.69 E-value=1.2e-15 Score=77.65 Aligned_cols=85 Identities=26% Similarity=0.479 Sum_probs=72.7
Q ss_pred CceeEEeeCCCcEEEeeCCC---ceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCc--ccccccccccc
Q psy7058 1 MGLLATTSADQTARIWNTED---FSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETG--EVDKEYSGHQK 75 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~ 75 (85)
|..|++++.|..|++|+... ..+...+...|...|.+++|+|.|+++++++.|.++.||.-..+ +++.++.+|+.
T Consensus 27 g~ilAscg~Dk~vriw~~~~~~s~~ck~vld~~hkrsVRsvAwsp~g~~La~aSFD~t~~Iw~k~~~efecv~~lEGHEn 106 (312)
T KOG0645|consen 27 GVILASCGTDKAVRIWSTSSGDSWTCKTVLDDGHKRSVRSVAWSPHGRYLASASFDATVVIWKKEDGEFECVATLEGHEN 106 (312)
T ss_pred ceEEEeecCCceEEEEecCCCCcEEEEEeccccchheeeeeeecCCCcEEEEeeccceEEEeecCCCceeEEeeeecccc
Confidence 44799999999999999884 44555555568889999999999999999999999999986644 57788999999
Q ss_pred ceeEEEEeCC
Q psy7058 76 AITSLAFCDF 85 (85)
Q Consensus 76 ~v~~~~~~~~ 85 (85)
.|.+++|++.
T Consensus 107 EVK~Vaws~s 116 (312)
T KOG0645|consen 107 EVKCVAWSAS 116 (312)
T ss_pred ceeEEEEcCC
Confidence 9999999863
No 34
>KOG0275|consensus
Probab=99.69 E-value=4.8e-17 Score=84.96 Aligned_cols=84 Identities=30% Similarity=0.485 Sum_probs=74.4
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeecc-------CCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCcccccccc-c
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTA-------NQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYS-G 72 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~ 72 (85)
|++|++|+.||.|.+|+..+++....++-. +...+.|+.|+.|..++++|+.||.|++|.+.++.+++.|. .
T Consensus 225 gqyLvsgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsEMlAsGsqDGkIKvWri~tG~ClRrFdrA 304 (508)
T KOG0275|consen 225 GQYLVSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSEMLASGSQDGKIKVWRIETGQCLRRFDRA 304 (508)
T ss_pred CceEeeccccceeeeehhccchhhhhhhhhhhcceeecccceEEEeecccHHHhhccCcCCcEEEEEEecchHHHHhhhh
Confidence 689999999999999999998876544321 34679999999999999999999999999999999999987 8
Q ss_pred cccceeEEEEeC
Q psy7058 73 HQKAITSLAFCD 84 (85)
Q Consensus 73 ~~~~v~~~~~~~ 84 (85)
|...|.+++|+.
T Consensus 305 HtkGvt~l~FSr 316 (508)
T KOG0275|consen 305 HTKGVTCLSFSR 316 (508)
T ss_pred hccCeeEEEEcc
Confidence 999999999975
No 35
>PTZ00420 coronin; Provisional
Probab=99.68 E-value=2.7e-15 Score=83.88 Aligned_cols=82 Identities=18% Similarity=0.267 Sum_probs=66.1
Q ss_pred ceeEEeeCCCcEEEeeCCCce--------eeeeeeccCCCcEEEEEecCCCCE-EEEEcCCCeEEEEEcCCccccccccc
Q psy7058 2 GLLATTSADQTARIWNTEDFS--------LVRELGTANQRWVWDAAFTLDSKF-LLTASSDGVARLWNIETGEVDKEYSG 72 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~ 72 (85)
++|++|+.|+.|++||+.++. +...+.+ |...|.++.|+|++.. +++++.|+.|++||+++++....+.
T Consensus 88 ~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~g-H~~~V~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~~~~~i~- 165 (568)
T PTZ00420 88 EILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKG-HKKKISIIDWNPMNYYIMCSSGFDSFVNIWDIENEKRAFQIN- 165 (568)
T ss_pred CEEEEEeCCCeEEEEECCCCCccccccccceEEeec-CCCcEEEEEECCCCCeEEEEEeCCCeEEEEECCCCcEEEEEe-
Confidence 578999999999999997642 2223344 7788999999998875 5688999999999999888766665
Q ss_pred cccceeEEEEeCC
Q psy7058 73 HQKAITSLAFCDF 85 (85)
Q Consensus 73 ~~~~v~~~~~~~~ 85 (85)
+...|.+++|+|.
T Consensus 166 ~~~~V~Slswspd 178 (568)
T PTZ00420 166 MPKKLSSLKWNIK 178 (568)
T ss_pred cCCcEEEEEECCC
Confidence 5678999999873
No 36
>KOG0291|consensus
Probab=99.68 E-value=1.1e-15 Score=86.21 Aligned_cols=61 Identities=28% Similarity=0.442 Sum_probs=50.6
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcC
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIE 62 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 62 (85)
|+++++|+.|+.+++||..++-+..++.. |...++.+.|+.++..+++.+.||+|+.||++
T Consensus 362 gq~iaTG~eDgKVKvWn~~SgfC~vTFte-Hts~Vt~v~f~~~g~~llssSLDGtVRAwDlk 422 (893)
T KOG0291|consen 362 GQLIATGAEDGKVKVWNTQSGFCFVTFTE-HTSGVTAVQFTARGNVLLSSSLDGTVRAWDLK 422 (893)
T ss_pred CcEEEeccCCCcEEEEeccCceEEEEecc-CCCceEEEEEEecCCEEEEeecCCeEEeeeec
Confidence 67899999999999999999888888876 77777777777777777777777777777764
No 37
>KOG0315|consensus
Probab=99.68 E-value=1.4e-15 Score=76.82 Aligned_cols=54 Identities=19% Similarity=0.513 Sum_probs=47.0
Q ss_pred CCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEEEEeCC
Q psy7058 31 NQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSLAFCDF 85 (85)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 85 (85)
+...+..+.|..+|++.++|++||+++|||++...+.+.++ +..+|+++..+|+
T Consensus 82 h~kNVtaVgF~~dgrWMyTgseDgt~kIWdlR~~~~qR~~~-~~spVn~vvlhpn 135 (311)
T KOG0315|consen 82 HTKNVTAVGFQCDGRWMYTGSEDGTVKIWDLRSLSCQRNYQ-HNSPVNTVVLHPN 135 (311)
T ss_pred cCCceEEEEEeecCeEEEecCCCceEEEEeccCcccchhcc-CCCCcceEEecCC
Confidence 44568889999999999999999999999999977777776 6799999988874
No 38
>KOG0295|consensus
Probab=99.67 E-value=1.5e-15 Score=79.78 Aligned_cols=83 Identities=19% Similarity=0.396 Sum_probs=78.6
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEE
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSL 80 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~ 80 (85)
|.+++++++|.+|++|+..++-++..+.+ +...+.-++.+.||.++++++.|.++++|-+.++.+...+..|+.+|-++
T Consensus 205 gd~ilS~srD~tik~We~~tg~cv~t~~~-h~ewvr~v~v~~DGti~As~s~dqtl~vW~~~t~~~k~~lR~hEh~vEci 283 (406)
T KOG0295|consen 205 GDHILSCSRDNTIKAWECDTGYCVKTFPG-HSEWVRMVRVNQDGTIIASCSNDQTLRVWVVATKQCKAELREHEHPVECI 283 (406)
T ss_pred CCeeeecccccceeEEecccceeEEeccC-chHhEEEEEecCCeeEEEecCCCceEEEEEeccchhhhhhhccccceEEE
Confidence 56899999999999999999999999998 88889999999999999999999999999999998889999999999999
Q ss_pred EEeC
Q psy7058 81 AFCD 84 (85)
Q Consensus 81 ~~~~ 84 (85)
+|.|
T Consensus 284 ~wap 287 (406)
T KOG0295|consen 284 AWAP 287 (406)
T ss_pred Eecc
Confidence 9977
No 39
>KOG0294|consensus
Probab=99.67 E-value=9.2e-16 Score=79.40 Aligned_cols=84 Identities=21% Similarity=0.263 Sum_probs=76.0
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCC--EEEEEcCCCeEEEEEcCCcccccccccccccee
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSK--FLLTASSDGVARLWNIETGEVDKEYSGHQKAIT 78 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~ 78 (85)
|.++++|+.|.+|++||.++......+.. |.+.|+++.|.+... +++++++||.|.+|+...-..+..+++|...|+
T Consensus 53 ~~~~aSGssDetI~IYDm~k~~qlg~ll~-HagsitaL~F~~~~S~shLlS~sdDG~i~iw~~~~W~~~~slK~H~~~Vt 131 (362)
T KOG0294|consen 53 GPYVASGSSDETIHIYDMRKRKQLGILLS-HAGSITALKFYPPLSKSHLLSGSDDGHIIIWRVGSWELLKSLKAHKGQVT 131 (362)
T ss_pred ceeEeccCCCCcEEEEeccchhhhcceec-cccceEEEEecCCcchhheeeecCCCcEEEEEcCCeEEeeeecccccccc
Confidence 46899999999999999998877777766 788899999998765 899999999999999999999999999999999
Q ss_pred EEEEeCC
Q psy7058 79 SLAFCDF 85 (85)
Q Consensus 79 ~~~~~~~ 85 (85)
.++.+|.
T Consensus 132 ~lsiHPS 138 (362)
T KOG0294|consen 132 DLSIHPS 138 (362)
T ss_pred eeEecCC
Confidence 9999884
No 40
>KOG0275|consensus
Probab=99.66 E-value=4.1e-17 Score=85.20 Aligned_cols=83 Identities=28% Similarity=0.462 Sum_probs=78.2
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEEE
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSLA 81 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~ 81 (85)
+.+++|+.||.|++|.+.++.+.+++..+|...+.++.|+.|+..+++++.|.++++..+++++++..+++|...|+...
T Consensus 276 EMlAsGsqDGkIKvWri~tG~ClRrFdrAHtkGvt~l~FSrD~SqiLS~sfD~tvRiHGlKSGK~LKEfrGHsSyvn~a~ 355 (508)
T KOG0275|consen 276 EMLASGSQDGKIKVWRIETGQCLRRFDRAHTKGVTCLSFSRDNSQILSASFDQTVRIHGLKSGKCLKEFRGHSSYVNEAT 355 (508)
T ss_pred HHhhccCcCCcEEEEEEecchHHHHhhhhhccCeeEEEEccCcchhhcccccceEEEeccccchhHHHhcCccccccceE
Confidence 35899999999999999999999999877888999999999999999999999999999999999999999999999888
Q ss_pred EeC
Q psy7058 82 FCD 84 (85)
Q Consensus 82 ~~~ 84 (85)
|++
T Consensus 356 ft~ 358 (508)
T KOG0275|consen 356 FTD 358 (508)
T ss_pred EcC
Confidence 875
No 41
>KOG0308|consensus
Probab=99.66 E-value=2e-15 Score=83.97 Aligned_cols=82 Identities=22% Similarity=0.364 Sum_probs=76.4
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEEE
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSLA 81 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~ 81 (85)
..+++|+..+.+++||-++.+.+..+++ |...|..+..++||..++++++|++|++||+...+++.++..|.+.|.++.
T Consensus 184 t~ivsGgtek~lr~wDprt~~kimkLrG-HTdNVr~ll~~dDGt~~ls~sSDgtIrlWdLgqQrCl~T~~vH~e~VWaL~ 262 (735)
T KOG0308|consen 184 TIIVSGGTEKDLRLWDPRTCKKIMKLRG-HTDNVRVLLVNDDGTRLLSASSDGTIRLWDLGQQRCLATYIVHKEGVWALQ 262 (735)
T ss_pred eEEEecCcccceEEeccccccceeeeec-cccceEEEEEcCCCCeEeecCCCceEEeeeccccceeeeEEeccCceEEEe
Confidence 4678999999999999999999999997 988999999999999999999999999999999999999999999999887
Q ss_pred EeC
Q psy7058 82 FCD 84 (85)
Q Consensus 82 ~~~ 84 (85)
-+|
T Consensus 263 ~~~ 265 (735)
T KOG0308|consen 263 SSP 265 (735)
T ss_pred eCC
Confidence 665
No 42
>KOG0276|consensus
Probab=99.66 E-value=8.1e-16 Score=85.43 Aligned_cols=83 Identities=18% Similarity=0.330 Sum_probs=76.5
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecC--CCCEEEEEcCCCeEEEEEcCCccccccccccccceeE
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTL--DSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITS 79 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~ 79 (85)
+.+++++.|+++++|.+....+..++.+ |...++++++-+ |..++++|++|.++++||.++..+++++.+|...|..
T Consensus 154 ntFaS~sLDrTVKVWslgs~~~nfTl~g-HekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk~CV~TLeGHt~Nvs~ 232 (794)
T KOG0276|consen 154 NTFASASLDRTVKVWSLGSPHPNFTLEG-HEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQTKSCVQTLEGHTNNVSF 232 (794)
T ss_pred cceeeeeccccEEEEEcCCCCCceeeec-cccCcceEEeccCCCcceEEecCCCceEEEeecchHHHHHHhhcccccceE
Confidence 4689999999999999999999999997 888899999977 4478999999999999999999999999999999999
Q ss_pred EEEeCC
Q psy7058 80 LAFCDF 85 (85)
Q Consensus 80 ~~~~~~ 85 (85)
+.|+|.
T Consensus 233 v~fhp~ 238 (794)
T KOG0276|consen 233 VFFHPE 238 (794)
T ss_pred EEecCC
Confidence 999873
No 43
>KOG0282|consensus
Probab=99.66 E-value=1.4e-15 Score=82.03 Aligned_cols=82 Identities=27% Similarity=0.445 Sum_probs=74.3
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCC-CEEEEEcCCCeEEEEEcCCccccccccccccceeE
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDS-KFLLTASSDGVARLWNIETGEVDKEYSGHQKAITS 79 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~ 79 (85)
|..+++++-|+.+++||+.+|++..++.. ...+.++.++|++ +.+++|+.|+.|+.||+++++.++.+..|-+.|..
T Consensus 270 g~~fLS~sfD~~lKlwDtETG~~~~~f~~--~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~kvvqeYd~hLg~i~~ 347 (503)
T KOG0282|consen 270 GTSFLSASFDRFLKLWDTETGQVLSRFHL--DKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGKVVQEYDRHLGAILD 347 (503)
T ss_pred CCeeeeeecceeeeeeccccceEEEEEec--CCCceeeecCCCCCcEEEEecCCCcEEEEeccchHHHHHHHhhhhheee
Confidence 46789999999999999999999999875 5568999999988 78899999999999999999999999999999999
Q ss_pred EEEeC
Q psy7058 80 LAFCD 84 (85)
Q Consensus 80 ~~~~~ 84 (85)
+.|-+
T Consensus 348 i~F~~ 352 (503)
T KOG0282|consen 348 ITFVD 352 (503)
T ss_pred eEEcc
Confidence 98854
No 44
>KOG0282|consensus
Probab=99.65 E-value=1.9e-16 Score=85.22 Aligned_cols=83 Identities=29% Similarity=0.397 Sum_probs=73.5
Q ss_pred CceeEEeeCCCcEEEeeCCC-ceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeE
Q psy7058 1 MGLLATTSADQTARIWNTED-FSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITS 79 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~ 79 (85)
+.+|+++++|+.|++|++.. +.+++.+.+ |..+|..++|+.+|..+++++-|+.+++||+.+|++...+. ....+++
T Consensus 227 ~hLlLS~gmD~~vklW~vy~~~~~lrtf~g-H~k~Vrd~~~s~~g~~fLS~sfD~~lKlwDtETG~~~~~f~-~~~~~~c 304 (503)
T KOG0282|consen 227 GHLLLSGGMDGLVKLWNVYDDRRCLRTFKG-HRKPVRDASFNNCGTSFLSASFDRFLKLWDTETGQVLSRFH-LDKVPTC 304 (503)
T ss_pred eeEEEecCCCceEEEEEEecCcceehhhhc-chhhhhhhhccccCCeeeeeecceeeeeeccccceEEEEEe-cCCCcee
Confidence 35789999999999999987 677777777 99999999999999999999999999999999999998886 4567788
Q ss_pred EEEeCC
Q psy7058 80 LAFCDF 85 (85)
Q Consensus 80 ~~~~~~ 85 (85)
++|+|.
T Consensus 305 vkf~pd 310 (503)
T KOG0282|consen 305 VKFHPD 310 (503)
T ss_pred eecCCC
Confidence 888773
No 45
>KOG0291|consensus
Probab=99.65 E-value=3.2e-15 Score=84.39 Aligned_cols=83 Identities=18% Similarity=0.350 Sum_probs=75.0
Q ss_pred CceeEEeeCC-CcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeE
Q psy7058 1 MGLLATTSAD-QTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITS 79 (85)
Q Consensus 1 g~~l~~~~~~-~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~ 79 (85)
|++++.++.. |.+.+|++.+..-+.+.++ |...+++++++|||+.+++|++|+.|++||...+-++.+|..|...|+.
T Consensus 319 GDWiA~g~~klgQLlVweWqsEsYVlKQQg-H~~~i~~l~YSpDgq~iaTG~eDgKVKvWn~~SgfC~vTFteHts~Vt~ 397 (893)
T KOG0291|consen 319 GDWIAFGCSKLGQLLVWEWQSESYVLKQQG-HSDRITSLAYSPDGQLIATGAEDGKVKVWNTQSGFCFVTFTEHTSGVTA 397 (893)
T ss_pred CCEEEEcCCccceEEEEEeeccceeeeccc-cccceeeEEECCCCcEEEeccCCCcEEEEeccCceEEEEeccCCCceEE
Confidence 5778877654 7899999998888888777 8888999999999999999999999999999999999999999999999
Q ss_pred EEEeC
Q psy7058 80 LAFCD 84 (85)
Q Consensus 80 ~~~~~ 84 (85)
+.|+.
T Consensus 398 v~f~~ 402 (893)
T KOG0291|consen 398 VQFTA 402 (893)
T ss_pred EEEEe
Confidence 99863
No 46
>KOG0318|consensus
Probab=99.65 E-value=4.1e-15 Score=81.15 Aligned_cols=82 Identities=24% Similarity=0.334 Sum_probs=74.3
Q ss_pred eeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCcccccccc---ccccceeE
Q psy7058 3 LLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYS---GHQKAITS 79 (85)
Q Consensus 3 ~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~---~~~~~v~~ 79 (85)
++++++.|+.+-+|+-+..+-....+. |..-+++++++|||..+++.+.|+.+.+||-++++.+..+. +|.+.|+.
T Consensus 162 Ri~T~sdDn~v~ffeGPPFKFk~s~r~-HskFV~~VRysPDG~~Fat~gsDgki~iyDGktge~vg~l~~~~aHkGsIfa 240 (603)
T KOG0318|consen 162 RIATGSDDNTVAFFEGPPFKFKSSFRE-HSKFVNCVRYSPDGSRFATAGSDGKIYIYDGKTGEKVGELEDSDAHKGSIFA 240 (603)
T ss_pred EEEeccCCCeEEEeeCCCeeeeecccc-cccceeeEEECCCCCeEEEecCCccEEEEcCCCccEEEEecCCCCccccEEE
Confidence 579999999999999887776666666 77889999999999999999999999999999999888887 89999999
Q ss_pred EEEeCC
Q psy7058 80 LAFCDF 85 (85)
Q Consensus 80 ~~~~~~ 85 (85)
++|+|.
T Consensus 241 lsWsPD 246 (603)
T KOG0318|consen 241 LSWSPD 246 (603)
T ss_pred EEECCC
Confidence 999984
No 47
>KOG0269|consensus
Probab=99.65 E-value=1.1e-15 Score=86.15 Aligned_cols=83 Identities=17% Similarity=0.346 Sum_probs=73.1
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecC-CCCEEEEEcCCCeEEEEEcCCc-cccccccccccceeE
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTL-DSKFLLTASSDGVARLWNIETG-EVDKEYSGHQKAITS 79 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~v~~ 79 (85)
+.|++|++|+.|++||++..+....+.. ....|.++.|+| .+..|+++.+.|.++.||++.. ++...+.+|.++|.+
T Consensus 147 ~iliSGSQDg~vK~~DlR~~~S~~t~~~-nSESiRDV~fsp~~~~~F~s~~dsG~lqlWDlRqp~r~~~k~~AH~GpV~c 225 (839)
T KOG0269|consen 147 NILISGSQDGTVKCWDLRSKKSKSTFRS-NSESIRDVKFSPGYGNKFASIHDSGYLQLWDLRQPDRCEKKLTAHNGPVLC 225 (839)
T ss_pred cEEEecCCCceEEEEeeecccccccccc-cchhhhceeeccCCCceEEEecCCceEEEeeccCchhHHHHhhcccCceEE
Confidence 5689999999999999998877777766 556699999999 6788999999999999999876 567889999999999
Q ss_pred EEEeCC
Q psy7058 80 LAFCDF 85 (85)
Q Consensus 80 ~~~~~~ 85 (85)
+.|+|.
T Consensus 226 ~nwhPn 231 (839)
T KOG0269|consen 226 LNWHPN 231 (839)
T ss_pred EeecCC
Confidence 999984
No 48
>KOG0276|consensus
Probab=99.65 E-value=4.9e-15 Score=82.45 Aligned_cols=83 Identities=22% Similarity=0.402 Sum_probs=77.7
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCc-cccccccccccceeEE
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETG-EVDKEYSGHQKAITSL 80 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~v~~~ 80 (85)
+++++|+.|..|++|+..+++.+..+.. |...|.++..+|.-.+++++++|.+|++|+.... .+.+++.+|..-|.++
T Consensus 68 nWiv~GsDD~~IrVfnynt~ekV~~FeA-H~DyIR~iavHPt~P~vLtsSDDm~iKlW~we~~wa~~qtfeGH~HyVMqv 146 (794)
T KOG0276|consen 68 NWIVTGSDDMQIRVFNYNTGEKVKTFEA-HSDYIRSIAVHPTLPYVLTSSDDMTIKLWDWENEWACEQTFEGHEHYVMQV 146 (794)
T ss_pred ceEEEecCCceEEEEecccceeeEEeec-cccceeeeeecCCCCeEEecCCccEEEEeeccCceeeeeEEcCcceEEEEE
Confidence 5799999999999999999999999988 9999999999999999999999999999999765 6778999999999999
Q ss_pred EEeCC
Q psy7058 81 AFCDF 85 (85)
Q Consensus 81 ~~~~~ 85 (85)
+|+|.
T Consensus 147 ~fnPk 151 (794)
T KOG0276|consen 147 AFNPK 151 (794)
T ss_pred EecCC
Confidence 99984
No 49
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.64 E-value=1.5e-14 Score=83.73 Aligned_cols=81 Identities=22% Similarity=0.501 Sum_probs=69.5
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecC-CCCEEEEEcCCCeEEEEEcCCccccccccccccceeEE
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTL-DSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSL 80 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~ 80 (85)
++|++++.|+.|++||+.+++....+.. |...|.++.|+| ++..+++++.|+.|++||++++..+..+.. ...+.++
T Consensus 546 ~~las~~~Dg~v~lWd~~~~~~~~~~~~-H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~~~~~~-~~~v~~v 623 (793)
T PLN00181 546 SQVASSNFEGVVQVWDVARSQLVTEMKE-HEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIKT-KANICCV 623 (793)
T ss_pred CEEEEEeCCCeEEEEECCCCeEEEEecC-CCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEEEEEec-CCCeEEE
Confidence 5789999999999999998888877766 888899999997 789999999999999999998887777764 3577788
Q ss_pred EEeC
Q psy7058 81 AFCD 84 (85)
Q Consensus 81 ~~~~ 84 (85)
.|++
T Consensus 624 ~~~~ 627 (793)
T PLN00181 624 QFPS 627 (793)
T ss_pred EEeC
Confidence 7753
No 50
>PTZ00420 coronin; Provisional
Probab=99.64 E-value=1.4e-14 Score=81.12 Aligned_cols=74 Identities=9% Similarity=0.208 Sum_probs=63.7
Q ss_pred eeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCcccccccccccccee
Q psy7058 3 LLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAIT 78 (85)
Q Consensus 3 ~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~ 78 (85)
.+++++.|+.|++||+++++....+. +...+.++.|+++|..+++++.|+.|++||+++++.+..+.+|.+.+.
T Consensus 140 iLaSgS~DgtIrIWDl~tg~~~~~i~--~~~~V~SlswspdG~lLat~s~D~~IrIwD~Rsg~~i~tl~gH~g~~~ 213 (568)
T PTZ00420 140 IMCSSGFDSFVNIWDIENEKRAFQIN--MPKKLSSLKWNIKGNLLSGTCVGKHMHIIDPRKQEIASSFHIHDGGKN 213 (568)
T ss_pred EEEEEeCCCeEEEEECCCCcEEEEEe--cCCcEEEEEECCCCCEEEEEecCCEEEEEECCCCcEEEEEecccCCce
Confidence 35789999999999999988776664 446799999999999999999999999999999988888888876543
No 51
>KOG0313|consensus
Probab=99.62 E-value=4.6e-15 Score=78.30 Aligned_cols=82 Identities=23% Similarity=0.480 Sum_probs=69.9
Q ss_pred ceeEEeeCCCcEEEeeCCCce--ee-eeeeccCCCcEEEEEecCC-CCEEEEEcCCCeEEEEEcCCcc-ccccccccccc
Q psy7058 2 GLLATTSADQTARIWNTEDFS--LV-RELGTANQRWVWDAAFTLD-SKFLLTASSDGVARLWNIETGE-VDKEYSGHQKA 76 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~--~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~ 76 (85)
.+|++|+.|..+++||.+++. .+ .++.+ |...|..+.|+|. ..+|++++.|+++++||++..+ ++..+.+|.+.
T Consensus 313 ~Ll~~gssdr~irl~DPR~~~gs~v~~s~~g-H~nwVssvkwsp~~~~~~~S~S~D~t~klWDvRS~k~plydI~~h~DK 391 (423)
T KOG0313|consen 313 KLLASGSSDRHIRLWDPRTGDGSVVSQSLIG-HKNWVSSVKWSPTNEFQLVSGSYDNTVKLWDVRSTKAPLYDIAGHNDK 391 (423)
T ss_pred ceeeecCCCCceeecCCCCCCCceeEEeeec-chhhhhheecCCCCceEEEEEecCCeEEEEEeccCCCcceeeccCCce
Confidence 578999999999999998753 33 33444 8889999999995 4568899999999999999988 88999999999
Q ss_pred eeEEEEeC
Q psy7058 77 ITSLAFCD 84 (85)
Q Consensus 77 v~~~~~~~ 84 (85)
|.++.|+.
T Consensus 392 vl~vdW~~ 399 (423)
T KOG0313|consen 392 VLSVDWNE 399 (423)
T ss_pred EEEEeccC
Confidence 99999974
No 52
>KOG0316|consensus
Probab=99.62 E-value=9.7e-15 Score=73.51 Aligned_cols=81 Identities=17% Similarity=0.318 Sum_probs=69.5
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCc--cccccccccccceeE
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETG--EVDKEYSGHQKAITS 79 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~v~~ 79 (85)
..+++|+-|..+.+||+.+++..+++.+ |...++.++|+.+...+++++-|..+++||.++. ++++.+....+.|.+
T Consensus 72 skf~s~GgDk~v~vwDV~TGkv~Rr~rg-H~aqVNtV~fNeesSVv~SgsfD~s~r~wDCRS~s~ePiQildea~D~V~S 150 (307)
T KOG0316|consen 72 SKFASCGGDKAVQVWDVNTGKVDRRFRG-HLAQVNTVRFNEESSVVASGSFDSSVRLWDCRSRSFEPIQILDEAKDGVSS 150 (307)
T ss_pred cccccCCCCceEEEEEcccCeeeeeccc-ccceeeEEEecCcceEEEeccccceeEEEEcccCCCCccchhhhhcCceeE
Confidence 3578999999999999999999999998 8889999999999999999999999999998754 566666666666666
Q ss_pred EEEe
Q psy7058 80 LAFC 83 (85)
Q Consensus 80 ~~~~ 83 (85)
+..+
T Consensus 151 i~v~ 154 (307)
T KOG0316|consen 151 IDVA 154 (307)
T ss_pred EEec
Confidence 5544
No 53
>KOG0281|consensus
Probab=99.62 E-value=1.5e-15 Score=79.97 Aligned_cols=80 Identities=24% Similarity=0.461 Sum_probs=72.4
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEEE
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSLA 81 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~ 81 (85)
+.+++|.+|++|++||..+-.+.+.+.+ |.+.+.|+.+ +.+.+++|++|.+|++||+++++++.++-.|.+.|..+.
T Consensus 208 ~kiVSGlrDnTikiWD~n~~~c~~~L~G-HtGSVLCLqy--d~rviisGSSDsTvrvWDv~tge~l~tlihHceaVLhlr 284 (499)
T KOG0281|consen 208 EKIVSGLRDNTIKIWDKNSLECLKILTG-HTGSVLCLQY--DERVIVSGSSDSTVRVWDVNTGEPLNTLIHHCEAVLHLR 284 (499)
T ss_pred hhhhcccccCceEEeccccHHHHHhhhc-CCCcEEeeec--cceEEEecCCCceEEEEeccCCchhhHHhhhcceeEEEE
Confidence 3578999999999999999888888887 8888999887 677999999999999999999999999999999999998
Q ss_pred EeC
Q psy7058 82 FCD 84 (85)
Q Consensus 82 ~~~ 84 (85)
|+.
T Consensus 285 f~n 287 (499)
T KOG0281|consen 285 FSN 287 (499)
T ss_pred EeC
Confidence 874
No 54
>KOG0277|consensus
Probab=99.62 E-value=1.6e-14 Score=73.23 Aligned_cols=83 Identities=22% Similarity=0.436 Sum_probs=72.6
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecC-CCCEEEEEcCCCeEEEEEcCCccccccccccccceeEE
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTL-DSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSL 80 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~ 80 (85)
+.+++++-|++|++|+..-++.+.++.+ +..-|....|+| .+..+++++.|+++++||++..-....+..|...|.++
T Consensus 118 ~~~ltsSWD~TiKLW~~~r~~Sv~Tf~g-h~~~Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr~~gk~~~i~ah~~Eil~c 196 (311)
T KOG0277|consen 118 RIFLTSSWDGTIKLWDPNRPNSVQTFNG-HNSCIYQAAFSPHIPNLFASASGDGTLRLWDVRSPGKFMSIEAHNSEILCC 196 (311)
T ss_pred eeEEeeccCCceEeecCCCCcceEeecC-CccEEEEEecCCCCCCeEEEccCCceEEEEEecCCCceeEEEeccceeEee
Confidence 3467889999999999998888888887 888899999999 67889999999999999998766566688999999999
Q ss_pred EEeCC
Q psy7058 81 AFCDF 85 (85)
Q Consensus 81 ~~~~~ 85 (85)
.|+.+
T Consensus 197 dw~ky 201 (311)
T KOG0277|consen 197 DWSKY 201 (311)
T ss_pred ccccc
Confidence 99864
No 55
>KOG1407|consensus
Probab=99.62 E-value=3.5e-15 Score=75.79 Aligned_cols=83 Identities=23% Similarity=0.282 Sum_probs=76.3
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEE
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSL 80 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~ 80 (85)
|+++|+|+.|-.+.+||+...-+.+.+.. ...+|..+.|+.+|++++++++|..|-|=++++|..+..++ +..+.+.+
T Consensus 201 GryfA~GsADAlvSLWD~~ELiC~R~isR-ldwpVRTlSFS~dg~~lASaSEDh~IDIA~vetGd~~~eI~-~~~~t~tV 278 (313)
T KOG1407|consen 201 GRYFATGSADALVSLWDVDELICERCISR-LDWPVRTLSFSHDGRMLASASEDHFIDIAEVETGDRVWEIP-CEGPTFTV 278 (313)
T ss_pred CceEeeccccceeeccChhHhhhheeecc-ccCceEEEEeccCcceeeccCccceEEeEecccCCeEEEee-ccCCceeE
Confidence 68999999999999999998888888776 77889999999999999999999999999999999888887 78899999
Q ss_pred EEeCC
Q psy7058 81 AFCDF 85 (85)
Q Consensus 81 ~~~~~ 85 (85)
+|+|.
T Consensus 279 AWHPk 283 (313)
T KOG1407|consen 279 AWHPK 283 (313)
T ss_pred EecCC
Confidence 99983
No 56
>KOG0289|consensus
Probab=99.62 E-value=2.8e-14 Score=76.60 Aligned_cols=85 Identities=20% Similarity=0.307 Sum_probs=75.7
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeecc-CCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeE
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTA-NQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITS 79 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~ 79 (85)
|++++++++|+.....|.+++......... ..-.+.+..|+|||-.|.+|..|+.++|||+.+......|.+|..+|..
T Consensus 315 geYllsAs~d~~w~Fsd~~~g~~lt~vs~~~s~v~~ts~~fHpDgLifgtgt~d~~vkiwdlks~~~~a~Fpght~~vk~ 394 (506)
T KOG0289|consen 315 GEYLLSASNDGTWAFSDISSGSQLTVVSDETSDVEYTSAAFHPDGLIFGTGTPDGVVKIWDLKSQTNVAKFPGHTGPVKA 394 (506)
T ss_pred CcEEEEecCCceEEEEEccCCcEEEEEeeccccceeEEeeEcCCceEEeccCCCceEEEEEcCCccccccCCCCCCceeE
Confidence 679999999999999999999877666542 3345899999999999999999999999999999999999999999999
Q ss_pred EEEeCC
Q psy7058 80 LAFCDF 85 (85)
Q Consensus 80 ~~~~~~ 85 (85)
++|+.+
T Consensus 395 i~FsEN 400 (506)
T KOG0289|consen 395 ISFSEN 400 (506)
T ss_pred EEeccC
Confidence 999864
No 57
>KOG0265|consensus
Probab=99.61 E-value=6.8e-15 Score=75.79 Aligned_cols=82 Identities=18% Similarity=0.390 Sum_probs=73.3
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEEE
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSLA 81 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~ 81 (85)
.++.+++.|+++++||+++......+.. .-++.++.|..++..+.+|+-|+.|++||++....+..+.+|.++|+.+.
T Consensus 146 ~lv~SgsdD~t~kl~D~R~k~~~~t~~~--kyqltAv~f~d~s~qv~sggIdn~ikvWd~r~~d~~~~lsGh~DtIt~ls 223 (338)
T KOG0265|consen 146 QLVCSGSDDGTLKLWDIRKKEAIKTFEN--KYQLTAVGFKDTSDQVISGGIDNDIKVWDLRKNDGLYTLSGHADTITGLS 223 (338)
T ss_pred eEEEecCCCceEEEEeecccchhhcccc--ceeEEEEEecccccceeeccccCceeeeccccCcceEEeecccCceeeEE
Confidence 4578999999999999998888877764 33589999999999999999999999999999999999999999999998
Q ss_pred EeCC
Q psy7058 82 FCDF 85 (85)
Q Consensus 82 ~~~~ 85 (85)
.+|+
T Consensus 224 ls~~ 227 (338)
T KOG0265|consen 224 LSRY 227 (338)
T ss_pred eccC
Confidence 8774
No 58
>KOG0264|consensus
Probab=99.61 E-value=7.3e-15 Score=78.45 Aligned_cols=83 Identities=18% Similarity=0.355 Sum_probs=67.7
Q ss_pred ceeEEeeCCCcEEEeeCCCcee-eeeeeccCCCcEEEEEecCC-CCEEEEEcCCCeEEEEEcCCc--------------c
Q psy7058 2 GLLATTSADQTARIWNTEDFSL-VRELGTANQRWVWDAAFTLD-SKFLLTASSDGVARLWNIETG--------------E 65 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~--------------~ 65 (85)
..||+|+.|+++.+||+++.+. +..+.. |...|..+.|+|. ...+++.+.|+.+.+||+..- +
T Consensus 286 ~ilAT~S~D~tV~LwDlRnL~~~lh~~e~-H~dev~~V~WSPh~etvLASSg~D~rl~vWDls~ig~eq~~eda~dgppE 364 (422)
T KOG0264|consen 286 FILATGSADKTVALWDLRNLNKPLHTFEG-HEDEVFQVEWSPHNETVLASSGTDRRLNVWDLSRIGEEQSPEDAEDGPPE 364 (422)
T ss_pred ceEEeccCCCcEEEeechhcccCceeccC-CCcceEEEEeCCCCCceeEecccCCcEEEEeccccccccChhhhccCCcc
Confidence 4689999999999999998754 445555 8889999999995 577889999999999998532 1
Q ss_pred ccccccccccceeEEEEeCC
Q psy7058 66 VDKEYSGHQKAITSLAFCDF 85 (85)
Q Consensus 66 ~~~~~~~~~~~v~~~~~~~~ 85 (85)
.+....+|...|..++|+|+
T Consensus 365 llF~HgGH~~kV~DfsWnp~ 384 (422)
T KOG0264|consen 365 LLFIHGGHTAKVSDFSWNPN 384 (422)
T ss_pred eeEEecCcccccccccCCCC
Confidence 23556689999999999985
No 59
>KOG0265|consensus
Probab=99.61 E-value=1.6e-14 Score=74.45 Aligned_cols=80 Identities=23% Similarity=0.293 Sum_probs=69.7
Q ss_pred CceeEEeeCCCcEEEeeCCCceee-eeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeE
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLV-RELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITS 79 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~ 79 (85)
|..+++++.|..|.+|++...... ..+.+ |.+.|..+.|.++++.+++++.|++++.||+++++..+.+++|..-++.
T Consensus 59 gs~~aSgG~Dr~I~LWnv~gdceN~~~lkg-HsgAVM~l~~~~d~s~i~S~gtDk~v~~wD~~tG~~~rk~k~h~~~vNs 137 (338)
T KOG0265|consen 59 GSCFASGGSDRAIVLWNVYGDCENFWVLKG-HSGAVMELHGMRDGSHILSCGTDKTVRGWDAETGKRIRKHKGHTSFVNS 137 (338)
T ss_pred CCeEeecCCcceEEEEeccccccceeeecc-ccceeEeeeeccCCCEEEEecCCceEEEEecccceeeehhccccceeee
Confidence 567999999999999997654443 34444 8899999999999999999999999999999999999999999988887
Q ss_pred EE
Q psy7058 80 LA 81 (85)
Q Consensus 80 ~~ 81 (85)
+.
T Consensus 138 ~~ 139 (338)
T KOG0265|consen 138 LD 139 (338)
T ss_pred cC
Confidence 65
No 60
>KOG0288|consensus
Probab=99.61 E-value=1.7e-14 Score=76.90 Aligned_cols=84 Identities=23% Similarity=0.302 Sum_probs=70.8
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeecc---CCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCcccccccccccc--
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTA---NQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQK-- 75 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~-- 75 (85)
|..|++++.|..+.+.|+++.+....+... .....+.+.|+|++.++++|+.||.|+||++.++++...+.....
T Consensus 353 g~~lLsssRDdtl~viDlRt~eI~~~~sA~g~k~asDwtrvvfSpd~~YvaAGS~dgsv~iW~v~tgKlE~~l~~s~s~~ 432 (459)
T KOG0288|consen 353 GLELLSSSRDDTLKVIDLRTKEIRQTFSAEGFKCASDWTRVVFSPDGSYVAAGSADGSVYIWSVFTGKLEKVLSLSTSNA 432 (459)
T ss_pred CeEEeeecCCCceeeeecccccEEEEeeccccccccccceeEECCCCceeeeccCCCcEEEEEccCceEEEEeccCCCCc
Confidence 356788899999999999998887776652 234588999999999999999999999999999998887775544
Q ss_pred ceeEEEEeC
Q psy7058 76 AITSLAFCD 84 (85)
Q Consensus 76 ~v~~~~~~~ 84 (85)
.|++++|+|
T Consensus 433 aI~s~~W~~ 441 (459)
T KOG0288|consen 433 AITSLSWNP 441 (459)
T ss_pred ceEEEEEcC
Confidence 599999987
No 61
>KOG0641|consensus
Probab=99.61 E-value=2e-14 Score=72.27 Aligned_cols=84 Identities=23% Similarity=0.353 Sum_probs=73.6
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeecc------CCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCcccccccccccc
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTA------NQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQK 75 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 75 (85)
-.+++|++|.+|+.||++-...+..+... ....+..+++.|.|+++++|..|....+||++.++.++.+-.|..
T Consensus 195 ~m~~sgsqdktirfwdlrv~~~v~~l~~~~~~~glessavaav~vdpsgrll~sg~~dssc~lydirg~r~iq~f~phsa 274 (350)
T KOG0641|consen 195 AMFASGSQDKTIRFWDLRVNSCVNTLDNDFHDGGLESSAVAAVAVDPSGRLLASGHADSSCMLYDIRGGRMIQRFHPHSA 274 (350)
T ss_pred cEEEccCCCceEEEEeeeccceeeeccCcccCCCcccceeEEEEECCCcceeeeccCCCceEEEEeeCCceeeeeCCCcc
Confidence 35789999999999999977777766531 235688999999999999999999999999999999999999999
Q ss_pred ceeEEEEeCC
Q psy7058 76 AITSLAFCDF 85 (85)
Q Consensus 76 ~v~~~~~~~~ 85 (85)
.|+++.|+|.
T Consensus 275 dir~vrfsp~ 284 (350)
T KOG0641|consen 275 DIRCVRFSPG 284 (350)
T ss_pred ceeEEEeCCC
Confidence 9999999983
No 62
>KOG0647|consensus
Probab=99.60 E-value=1.5e-14 Score=74.67 Aligned_cols=82 Identities=24% Similarity=0.447 Sum_probs=68.6
Q ss_pred ceeEEeeCCCcEEEeeCCC-ceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEE
Q psy7058 2 GLLATTSADQTARIWNTED-FSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSL 80 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~ 80 (85)
.++++++-|+++++|++.. +....+....+.+++.+++|+.+|..+++++.|+.+++||+.+++ ..++..|..+|.++
T Consensus 41 ~~~~A~SWD~tVR~wevq~~g~~~~ka~~~~~~PvL~v~WsddgskVf~g~~Dk~~k~wDL~S~Q-~~~v~~Hd~pvkt~ 119 (347)
T KOG0647|consen 41 NLLAAGSWDGTVRIWEVQNSGQLVPKAQQSHDGPVLDVCWSDDGSKVFSGGCDKQAKLWDLASGQ-VSQVAAHDAPVKTC 119 (347)
T ss_pred ceEEecccCCceEEEEEecCCcccchhhhccCCCeEEEEEccCCceEEeeccCCceEEEEccCCC-eeeeeecccceeEE
Confidence 4577999999999999986 344444444488899999999999999999999999999999884 55666799999999
Q ss_pred EEeC
Q psy7058 81 AFCD 84 (85)
Q Consensus 81 ~~~~ 84 (85)
.|-+
T Consensus 120 ~wv~ 123 (347)
T KOG0647|consen 120 HWVP 123 (347)
T ss_pred EEec
Confidence 8854
No 63
>KOG0645|consensus
Probab=99.60 E-value=5.8e-14 Score=71.69 Aligned_cols=83 Identities=27% Similarity=0.398 Sum_probs=72.9
Q ss_pred CceeEEeeCCCcEEEeeCCC--ceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCc---ccccccccccc
Q psy7058 1 MGLLATTSADQTARIWNTED--FSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETG---EVDKEYSGHQK 75 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~~~~~~~~~ 75 (85)
|++|++++-|.++.+|.-.. .+++..+.+ |...+.+++|+.+|.+|++++.|+.+-||.+... .+...++.|.+
T Consensus 73 g~~La~aSFD~t~~Iw~k~~~efecv~~lEG-HEnEVK~Vaws~sG~~LATCSRDKSVWiWe~deddEfec~aVL~~Htq 151 (312)
T KOG0645|consen 73 GRYLASASFDATVVIWKKEDGEFECVATLEG-HENEVKCVAWSASGNYLATCSRDKSVWIWEIDEDDEFECIAVLQEHTQ 151 (312)
T ss_pred CcEEEEeeccceEEEeecCCCceeEEeeeec-cccceeEEEEcCCCCEEEEeeCCCeEEEEEecCCCcEEEEeeeccccc
Confidence 67899999999999998653 366777777 8888999999999999999999999999999754 46678889999
Q ss_pred ceeEEEEeC
Q psy7058 76 AITSLAFCD 84 (85)
Q Consensus 76 ~v~~~~~~~ 84 (85)
.|..+.|+|
T Consensus 152 DVK~V~WHP 160 (312)
T KOG0645|consen 152 DVKHVIWHP 160 (312)
T ss_pred cccEEEEcC
Confidence 999999998
No 64
>KOG0643|consensus
Probab=99.60 E-value=6.5e-15 Score=75.09 Aligned_cols=83 Identities=19% Similarity=0.286 Sum_probs=73.5
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEE
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSL 80 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~ 80 (85)
++.+++|..++.|..||+++++....-...|...|+.++++++..++++++.|.+-++||+.+.+.++++. ...+|++.
T Consensus 159 ~~~ii~Ghe~G~is~~da~~g~~~v~s~~~h~~~Ind~q~s~d~T~FiT~s~Dttakl~D~~tl~v~Kty~-te~PvN~a 237 (327)
T KOG0643|consen 159 GETIIAGHEDGSISIYDARTGKELVDSDEEHSSKINDLQFSRDRTYFITGSKDTTAKLVDVRTLEVLKTYT-TERPVNTA 237 (327)
T ss_pred CCEEEEecCCCcEEEEEcccCceeeechhhhccccccccccCCcceEEecccCccceeeeccceeeEEEee-ecccccce
Confidence 46799999999999999999866655544478889999999999999999999999999999999998887 57789888
Q ss_pred EEeC
Q psy7058 81 AFCD 84 (85)
Q Consensus 81 ~~~~ 84 (85)
+++|
T Consensus 238 aisP 241 (327)
T KOG0643|consen 238 AISP 241 (327)
T ss_pred eccc
Confidence 8887
No 65
>KOG0643|consensus
Probab=99.60 E-value=4.3e-14 Score=72.18 Aligned_cols=82 Identities=26% Similarity=0.439 Sum_probs=75.3
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEE
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSL 80 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~ 80 (85)
|.+|.+++.|....+|-..+++.+..+.+ |.+.|+++..+.+.+.+++|+.|.++++||+++++++..++ ...+|..+
T Consensus 22 GDLlFscaKD~~~~vw~s~nGerlGty~G-HtGavW~~Did~~s~~liTGSAD~t~kLWDv~tGk~la~~k-~~~~Vk~~ 99 (327)
T KOG0643|consen 22 GDLLFSCAKDSTPTVWYSLNGERLGTYDG-HTGAVWCCDIDWDSKHLITGSADQTAKLWDVETGKQLATWK-TNSPVKRV 99 (327)
T ss_pred CcEEEEecCCCCceEEEecCCceeeeecC-CCceEEEEEecCCcceeeeccccceeEEEEcCCCcEEEEee-cCCeeEEE
Confidence 67899999999999999999999999998 99999999999999999999999999999999999988887 56788888
Q ss_pred EEeC
Q psy7058 81 AFCD 84 (85)
Q Consensus 81 ~~~~ 84 (85)
.|++
T Consensus 100 ~F~~ 103 (327)
T KOG0643|consen 100 DFSF 103 (327)
T ss_pred eecc
Confidence 7764
No 66
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=99.59 E-value=1.1e-13 Score=70.61 Aligned_cols=83 Identities=39% Similarity=0.582 Sum_probs=72.3
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEE
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSL 80 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~ 80 (85)
++++++++.++.+++|+..+++....... +...+..+.|.+++..+++++.++.+++|++..++....+..|...+.++
T Consensus 21 ~~~l~~~~~~g~i~i~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~~~~i~i~~~~~~~~~~~~~~~~~~i~~~ 99 (289)
T cd00200 21 GKLLATGSGDGTIKVWDLETGELLRTLKG-HTGPVRDVAASADGTYLASGSSDKTIRLWDLETGECVRTLTGHTSYVSSV 99 (289)
T ss_pred CCEEEEeecCcEEEEEEeeCCCcEEEEec-CCcceeEEEECCCCCEEEEEcCCCeEEEEEcCcccceEEEeccCCcEEEE
Confidence 46789999999999999998776666655 66778899999999999999999999999999888888888888899999
Q ss_pred EEeC
Q psy7058 81 AFCD 84 (85)
Q Consensus 81 ~~~~ 84 (85)
.|+|
T Consensus 100 ~~~~ 103 (289)
T cd00200 100 AFSP 103 (289)
T ss_pred EEcC
Confidence 9986
No 67
>KOG1332|consensus
Probab=99.59 E-value=4.4e-14 Score=71.37 Aligned_cols=84 Identities=29% Similarity=0.418 Sum_probs=71.2
Q ss_pred CceeEEeeCCCcEEEeeCCCc---eeeeeeeccCCCcEEEEEecC--CCCEEEEEcCCCeEEEEEcCCcccc--cccccc
Q psy7058 1 MGLLATTSADQTARIWNTEDF---SLVRELGTANQRWVWDAAFTL--DSKFLLTASSDGVARLWNIETGEVD--KEYSGH 73 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~---~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~i~~~~~~~~~~~--~~~~~~ 73 (85)
|.+|++++.|++|+++.+++. +.+..+.+ |.++++.+.|.. -|.++++++-|+.+.||.-.+++-. ..+..|
T Consensus 23 gkrlATcsSD~tVkIf~v~~n~~s~ll~~L~G-h~GPVwqv~wahPk~G~iLAScsYDgkVIiWke~~g~w~k~~e~~~h 101 (299)
T KOG1332|consen 23 GKRLATCSSDGTVKIFEVRNNGQSKLLAELTG-HSGPVWKVAWAHPKFGTILASCSYDGKVIIWKEENGRWTKAYEHAAH 101 (299)
T ss_pred cceeeeecCCccEEEEEEcCCCCceeeeEecC-CCCCeeEEeecccccCcEeeEeecCceEEEEecCCCchhhhhhhhhh
Confidence 578999999999999999764 34556666 999999999976 7999999999999999999888533 345678
Q ss_pred ccceeEEEEeCC
Q psy7058 74 QKAITSLAFCDF 85 (85)
Q Consensus 74 ~~~v~~~~~~~~ 85 (85)
...|++++|.|+
T Consensus 102 ~~SVNsV~waph 113 (299)
T KOG1332|consen 102 SASVNSVAWAPH 113 (299)
T ss_pred cccceeeccccc
Confidence 999999999885
No 68
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=99.58 E-value=1.7e-13 Score=69.96 Aligned_cols=82 Identities=33% Similarity=0.564 Sum_probs=71.9
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEEE
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSLA 81 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~ 81 (85)
+++++++.++.+++||..+++....+.. +...+.++.|++++.++++++.++.+.+|++.+.+....+..|...+.+++
T Consensus 64 ~~l~~~~~~~~i~i~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~ 142 (289)
T cd00200 64 TYLASGSSDKTIRLWDLETGECVRTLTG-HTSYVSSVAFSPDGRILSSSSRDKTIKVWDVETGKCLTTLRGHTDWVNSVA 142 (289)
T ss_pred CEEEEEcCCCeEEEEEcCcccceEEEec-cCCcEEEEEEcCCCCEEEEecCCCeEEEEECCCcEEEEEeccCCCcEEEEE
Confidence 4789999999999999998777777665 666799999999988888888899999999998888888888888999999
Q ss_pred EeC
Q psy7058 82 FCD 84 (85)
Q Consensus 82 ~~~ 84 (85)
|+|
T Consensus 143 ~~~ 145 (289)
T cd00200 143 FSP 145 (289)
T ss_pred EcC
Confidence 987
No 69
>KOG0283|consensus
Probab=99.57 E-value=7e-15 Score=82.92 Aligned_cols=52 Identities=31% Similarity=0.498 Sum_probs=45.9
Q ss_pred CCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEEEEeC
Q psy7058 31 NQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSLAFCD 84 (85)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 84 (85)
|...|.++.|+.++ +|++.+.|+++++|++....++..|. |.+-|+|++|+|
T Consensus 368 Ht~DILDlSWSKn~-fLLSSSMDKTVRLWh~~~~~CL~~F~-HndfVTcVaFnP 419 (712)
T KOG0283|consen 368 HTADILDLSWSKNN-FLLSSSMDKTVRLWHPGRKECLKVFS-HNDFVTCVAFNP 419 (712)
T ss_pred cchhheecccccCC-eeEeccccccEEeecCCCcceeeEEe-cCCeeEEEEecc
Confidence 55568889998554 78888999999999999999999998 999999999998
No 70
>KOG0269|consensus
Probab=99.57 E-value=1.8e-14 Score=81.42 Aligned_cols=84 Identities=11% Similarity=0.188 Sum_probs=67.1
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccc-cccceeE
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSG-HQKAITS 79 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~v~~ 79 (85)
+..++++...|.+.+||++..........+|.+++.++.|+|++.++|+|+.|+.|+||++...+.-..... ...++..
T Consensus 189 ~~~F~s~~dsG~lqlWDlRqp~r~~~k~~AH~GpV~c~nwhPnr~~lATGGRDK~vkiWd~t~~~~~~~~tInTiapv~r 268 (839)
T KOG0269|consen 189 GNKFASIHDSGYLQLWDLRQPDRCEKKLTAHNGPVLCLNWHPNREWLATGGRDKMVKIWDMTDSRAKPKHTINTIAPVGR 268 (839)
T ss_pred CceEEEecCCceEEEeeccCchhHHHHhhcccCceEEEeecCCCceeeecCCCccEEEEeccCCCccceeEEeecceeee
Confidence 356889999999999999977655544455999999999999999999999999999999986543322221 3568888
Q ss_pred EEEeC
Q psy7058 80 LAFCD 84 (85)
Q Consensus 80 ~~~~~ 84 (85)
++|-|
T Consensus 269 VkWRP 273 (839)
T KOG0269|consen 269 VKWRP 273 (839)
T ss_pred eeecc
Confidence 88876
No 71
>KOG0292|consensus
Probab=99.57 E-value=2.6e-14 Score=82.25 Aligned_cols=82 Identities=21% Similarity=0.370 Sum_probs=78.4
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEEE
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSLA 81 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~ 81 (85)
.++++|+.|-.|++|+..+..+..++.+ |-..|..+.|++.-.+++++++|-+|+||+..+.+++..+.+|...|.|.+
T Consensus 64 plFVSGGDDykIkVWnYk~rrclftL~G-HlDYVRt~~FHheyPWIlSASDDQTIrIWNwqsr~~iavltGHnHYVMcAq 142 (1202)
T KOG0292|consen 64 PLFVSGGDDYKIKVWNYKTRRCLFTLLG-HLDYVRTVFFHHEYPWILSASDDQTIRIWNWQSRKCIAVLTGHNHYVMCAQ 142 (1202)
T ss_pred CeEEecCCccEEEEEecccceehhhhcc-ccceeEEeeccCCCceEEEccCCCeEEEEeccCCceEEEEecCceEEEeec
Confidence 5689999999999999999999999988 889999999999999999999999999999999999999999999999999
Q ss_pred EeC
Q psy7058 82 FCD 84 (85)
Q Consensus 82 ~~~ 84 (85)
|+|
T Consensus 143 Fhp 145 (1202)
T KOG0292|consen 143 FHP 145 (1202)
T ss_pred cCC
Confidence 988
No 72
>KOG0296|consensus
Probab=99.56 E-value=2.3e-14 Score=75.39 Aligned_cols=80 Identities=29% Similarity=0.417 Sum_probs=71.4
Q ss_pred eeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEEEE
Q psy7058 3 LLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSLAF 82 (85)
Q Consensus 3 ~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~~ 82 (85)
+.|.|+.||+|.+||....+...... |...|..+.|-+ ..++++++.+|.|+.||.++++....+.+|...|.++++
T Consensus 300 L~A~G~vdG~i~iyD~a~~~~R~~c~--he~~V~~l~w~~-t~~l~t~c~~g~v~~wDaRtG~l~~~y~GH~~~Il~f~l 376 (399)
T KOG0296|consen 300 LAACGSVDGTIAIYDLAASTLRHICE--HEDGVTKLKWLN-TDYLLTACANGKVRQWDARTGQLKFTYTGHQMGILDFAL 376 (399)
T ss_pred hhhcccccceEEEEecccchhheecc--CCCceEEEEEcC-cchheeeccCceEEeeeccccceEEEEecCchheeEEEE
Confidence 45789999999999998877766655 667799999987 788999999999999999999999999999999999999
Q ss_pred eCC
Q psy7058 83 CDF 85 (85)
Q Consensus 83 ~~~ 85 (85)
+|+
T Consensus 377 s~~ 379 (399)
T KOG0296|consen 377 SPQ 379 (399)
T ss_pred cCC
Confidence 874
No 73
>KOG0293|consensus
Probab=99.56 E-value=9.3e-15 Score=78.16 Aligned_cols=61 Identities=25% Similarity=0.418 Sum_probs=56.2
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecC-CCCEEEEEcCCCeEEEEEcCC
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTL-DSKFLLTASSDGVARLWNIET 63 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~~ 63 (85)
.++++|++|+.|++|+..+++++..+.+ |...+++++|+| +..++|++++||+|+||....
T Consensus 453 ~fiaSGSED~kvyIWhr~sgkll~~LsG-Hs~~vNcVswNP~~p~m~ASasDDgtIRIWg~~~ 514 (519)
T KOG0293|consen 453 KFIASGSEDSKVYIWHRISGKLLAVLSG-HSKTVNCVSWNPADPEMFASASDDGTIRIWGPSD 514 (519)
T ss_pred ceEEecCCCceEEEEEccCCceeEeecC-CcceeeEEecCCCCHHHhhccCCCCeEEEecCCc
Confidence 5789999999999999999999999998 888999999999 567899999999999998754
No 74
>KOG0289|consensus
Probab=99.55 E-value=8.3e-14 Score=74.84 Aligned_cols=83 Identities=23% Similarity=0.351 Sum_probs=71.0
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCcccccccccc-ccceeE
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGH-QKAITS 79 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~v~~ 79 (85)
|-.+.+|..|+.+++||+.++.....+.+ |.++|..+.|+-+|-++++++.|+.|++||++..+...++... ..++.+
T Consensus 359 gLifgtgt~d~~vkiwdlks~~~~a~Fpg-ht~~vk~i~FsENGY~Lat~add~~V~lwDLRKl~n~kt~~l~~~~~v~s 437 (506)
T KOG0289|consen 359 GLIFGTGTPDGVVKIWDLKSQTNVAKFPG-HTGPVKAISFSENGYWLATAADDGSVKLWDLRKLKNFKTIQLDEKKEVNS 437 (506)
T ss_pred ceEEeccCCCceEEEEEcCCccccccCCC-CCCceeEEEeccCceEEEEEecCCeEEEEEehhhcccceeecccccccee
Confidence 34678999999999999999998888888 9999999999999999999999999999999998887777632 235777
Q ss_pred EEEeC
Q psy7058 80 LAFCD 84 (85)
Q Consensus 80 ~~~~~ 84 (85)
+.|.+
T Consensus 438 ~~fD~ 442 (506)
T KOG0289|consen 438 LSFDQ 442 (506)
T ss_pred EEEcC
Confidence 77643
No 75
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.55 E-value=3.6e-13 Score=78.15 Aligned_cols=82 Identities=20% Similarity=0.289 Sum_probs=68.7
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEec-CCCCEEEEEcCCCeEEEEEcCCcc-cccccccccccee
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFT-LDSKFLLTASSDGVARLWNIETGE-VDKEYSGHQKAIT 78 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~v~ 78 (85)
+.+|++++.|+.+++||++++.....+.. ...+.++.|+ +++..+++++.|+.|++||++..+ ....+.+|...|.
T Consensus 588 ~~~L~Sgs~Dg~v~iWd~~~~~~~~~~~~--~~~v~~v~~~~~~g~~latgs~dg~I~iwD~~~~~~~~~~~~~h~~~V~ 665 (793)
T PLN00181 588 PTLLASGSDDGSVKLWSINQGVSIGTIKT--KANICCVQFPSESGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHSKTVS 665 (793)
T ss_pred CCEEEEEcCCCEEEEEECCCCcEEEEEec--CCCeEEEEEeCCCCCEEEEEeCCCeEEEEECCCCCccceEecCCCCCEE
Confidence 35789999999999999998888777764 3468899995 479999999999999999998765 4567778999999
Q ss_pred EEEEeC
Q psy7058 79 SLAFCD 84 (85)
Q Consensus 79 ~~~~~~ 84 (85)
+++|.+
T Consensus 666 ~v~f~~ 671 (793)
T PLN00181 666 YVRFVD 671 (793)
T ss_pred EEEEeC
Confidence 999864
No 76
>KOG0305|consensus
Probab=99.55 E-value=2.1e-14 Score=78.63 Aligned_cols=84 Identities=19% Similarity=0.275 Sum_probs=75.2
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEEE
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSLA 81 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~ 81 (85)
..+.+|+.++.|..+|++..+........|...+..+.|++|+.++++|+.|+.+.|||.....+...+..|..+|..++
T Consensus 271 ~~lssGsr~~~I~~~dvR~~~~~~~~~~~H~qeVCgLkws~d~~~lASGgnDN~~~Iwd~~~~~p~~~~~~H~aAVKA~a 350 (484)
T KOG0305|consen 271 SVLSSGSRDGKILNHDVRISQHVVSTLQGHRQEVCGLKWSPDGNQLASGGNDNVVFIWDGLSPEPKFTFTEHTAAVKALA 350 (484)
T ss_pred ceEEEecCCCcEEEEEEecchhhhhhhhcccceeeeeEECCCCCeeccCCCccceEeccCCCccccEEEeccceeeeEee
Confidence 45789999999999999988776663334888899999999999999999999999999988888899999999999999
Q ss_pred EeCC
Q psy7058 82 FCDF 85 (85)
Q Consensus 82 ~~~~ 85 (85)
|+||
T Consensus 351 wcP~ 354 (484)
T KOG0305|consen 351 WCPW 354 (484)
T ss_pred eCCC
Confidence 9996
No 77
>KOG0270|consensus
Probab=99.54 E-value=1.4e-13 Score=73.94 Aligned_cols=82 Identities=18% Similarity=0.255 Sum_probs=65.3
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecC-CCCEEEEEcCCCeEEEEEcCCccccccccccccceeEE
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTL-DSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSL 80 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~ 80 (85)
+.|++|+.|.++++||+.++++...+.. +...|+++.|+| ....+++|+.|+++.+.|.+........-...+.|-.+
T Consensus 257 nVLaSgsaD~TV~lWD~~~g~p~~s~~~-~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~~s~~~wk~~g~VEkv 335 (463)
T KOG0270|consen 257 NVLASGSADKTVKLWDVDTGKPKSSITH-HGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDPSNSGKEWKFDGEVEKV 335 (463)
T ss_pred eeEEecCCCceEEEEEcCCCCcceehhh-cCCceeEEEecCCCceEEEeccccceEEeeeccCccccCceEEeccceEEE
Confidence 4689999999999999999999988876 788899999999 56789999999999999999533222222244566666
Q ss_pred EEeC
Q psy7058 81 AFCD 84 (85)
Q Consensus 81 ~~~~ 84 (85)
+|+|
T Consensus 336 ~w~~ 339 (463)
T KOG0270|consen 336 AWDP 339 (463)
T ss_pred EecC
Confidence 6665
No 78
>KOG0318|consensus
Probab=99.54 E-value=1.4e-13 Score=75.36 Aligned_cols=71 Identities=23% Similarity=0.368 Sum_probs=64.0
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeec--cCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCcccccccc
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGT--ANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYS 71 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 71 (85)
|+++++.+.|+++.+||-.+++.+..+.. +|.+.|..+.|+||++.+++++.|.+++|||+.+.+..+++.
T Consensus 202 G~~Fat~gsDgki~iyDGktge~vg~l~~~~aHkGsIfalsWsPDs~~~~T~SaDkt~KIWdVs~~slv~t~~ 274 (603)
T KOG0318|consen 202 GSRFATAGSDGKIYIYDGKTGEKVGELEDSDAHKGSIFALSWSPDSTQFLTVSADKTIKIWDVSTNSLVSTWP 274 (603)
T ss_pred CCeEEEecCCccEEEEcCCCccEEEEecCCCCccccEEEEEECCCCceEEEecCCceEEEEEeeccceEEEee
Confidence 67899999999999999999999988873 488899999999999999999999999999998887766654
No 79
>KOG0274|consensus
Probab=99.54 E-value=2.2e-13 Score=76.11 Aligned_cols=79 Identities=27% Similarity=0.416 Sum_probs=66.9
Q ss_pred eeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEEEE
Q psy7058 3 LLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSLAF 82 (85)
Q Consensus 3 ~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~~ 82 (85)
.+++|+.|.++++|++.++..+..+.+ |..+|.++..+ +..+++|+.|+.|.+|++..++++..+.+|...|.++.+
T Consensus 303 ~~~sgs~D~tVkVW~v~n~~~l~l~~~-h~~~V~~v~~~--~~~lvsgs~d~~v~VW~~~~~~cl~sl~gH~~~V~sl~~ 379 (537)
T KOG0274|consen 303 LLVSGSRDNTVKVWDVTNGACLNLLRG-HTGPVNCVQLD--EPLLVSGSYDGTVKVWDPRTGKCLKSLSGHTGRVYSLIV 379 (537)
T ss_pred eEeeccCCceEEEEeccCcceEEEecc-ccccEEEEEec--CCEEEEEecCceEEEEEhhhceeeeeecCCcceEEEEEe
Confidence 345667888888888888877777777 88889999885 889999999999999999999999999999999999877
Q ss_pred eC
Q psy7058 83 CD 84 (85)
Q Consensus 83 ~~ 84 (85)
.+
T Consensus 380 ~~ 381 (537)
T KOG0274|consen 380 DS 381 (537)
T ss_pred cC
Confidence 54
No 80
>KOG1007|consensus
Probab=99.54 E-value=6.5e-14 Score=72.27 Aligned_cols=83 Identities=24% Similarity=0.434 Sum_probs=70.7
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCC-EEEEEcCCCeEEEEEcCCcc-ccccccccccceeE
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSK-FLLTASSDGVARLWNIETGE-VDKEYSGHQKAITS 79 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~v~~ 79 (85)
+.+++. .|+++..||+++.+....+..+|...+..+.++|+.. +++++++|+.|+|||.+..+ ++..+.+|..=|.+
T Consensus 185 nqv~tt-~d~tl~~~D~RT~~~~~sI~dAHgq~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~tk~pv~el~~HsHWvW~ 263 (370)
T KOG1007|consen 185 NQVATT-SDSTLQFWDLRTMKKNNSIEDAHGQRVRDLDFNPNKQHILVTCGDDGYVRIWDTRKTKFPVQELPGHSHWVWA 263 (370)
T ss_pred ceEEEe-CCCcEEEEEccchhhhcchhhhhcceeeeccCCCCceEEEEEcCCCccEEEEeccCCCccccccCCCceEEEE
Confidence 344444 5789999999999999999888988999999999764 57899999999999998764 66789999999999
Q ss_pred EEEeCC
Q psy7058 80 LAFCDF 85 (85)
Q Consensus 80 ~~~~~~ 85 (85)
+.|+|.
T Consensus 264 VRfn~~ 269 (370)
T KOG1007|consen 264 VRFNPE 269 (370)
T ss_pred EEecCc
Confidence 999873
No 81
>KOG0292|consensus
Probab=99.53 E-value=3e-14 Score=82.03 Aligned_cols=82 Identities=15% Similarity=0.263 Sum_probs=77.6
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEEE
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSLA 81 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~ 81 (85)
.+++++-.+|.|.+||-+.+..+.++.. |.+++..++|+|++.++++|++|..|++|+.++.+++.++.+|-+.|+.+.
T Consensus 22 PwILtslHsG~IQlWDYRM~tli~rFde-HdGpVRgv~FH~~qplFVSGGDDykIkVWnYk~rrclftL~GHlDYVRt~~ 100 (1202)
T KOG0292|consen 22 PWILTSLHSGVIQLWDYRMGTLIDRFDE-HDGPVRGVDFHPTQPLFVSGGDDYKIKVWNYKTRRCLFTLLGHLDYVRTVF 100 (1202)
T ss_pred CEEEEeecCceeeeehhhhhhHHhhhhc-cCCccceeeecCCCCeEEecCCccEEEEEecccceehhhhccccceeEEee
Confidence 4688999999999999999999999887 999999999999999999999999999999999999999999999999999
Q ss_pred EeC
Q psy7058 82 FCD 84 (85)
Q Consensus 82 ~~~ 84 (85)
|++
T Consensus 101 FHh 103 (1202)
T KOG0292|consen 101 FHH 103 (1202)
T ss_pred ccC
Confidence 975
No 82
>KOG0274|consensus
Probab=99.53 E-value=2.8e-13 Score=75.66 Aligned_cols=80 Identities=20% Similarity=0.363 Sum_probs=71.6
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEE
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSL 80 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~ 80 (85)
+.++++|+.|.++++||..++++...+.+ |...+.++.. ....+++|+.|.+|++|++.++..+..+.+|..+|+++
T Consensus 261 ~~~lvsgS~D~t~rvWd~~sg~C~~~l~g-h~stv~~~~~--~~~~~~sgs~D~tVkVW~v~n~~~l~l~~~h~~~V~~v 337 (537)
T KOG0274|consen 261 GDKLVSGSTDKTERVWDCSTGECTHSLQG-HTSSVRCLTI--DPFLLVSGSRDNTVKVWDVTNGACLNLLRGHTGPVNCV 337 (537)
T ss_pred CCEEEEEecCCcEEeEecCCCcEEEEecC-CCceEEEEEc--cCceEeeccCCceEEEEeccCcceEEEeccccccEEEE
Confidence 36789999999999999999999999997 8888888876 56677888999999999999999999999999999999
Q ss_pred EEe
Q psy7058 81 AFC 83 (85)
Q Consensus 81 ~~~ 83 (85)
..+
T Consensus 338 ~~~ 340 (537)
T KOG0274|consen 338 QLD 340 (537)
T ss_pred Eec
Confidence 865
No 83
>KOG0639|consensus
Probab=99.53 E-value=2e-14 Score=78.65 Aligned_cols=81 Identities=20% Similarity=0.359 Sum_probs=70.6
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEEE
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSLA 81 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~ 81 (85)
+..+++..||.|.|||+.+...++.+++ |...+.||.++++|..+-+|+.|.++|.||+++++.++... ....|.++.
T Consensus 522 kvcFsccsdGnI~vwDLhnq~~VrqfqG-htDGascIdis~dGtklWTGGlDntvRcWDlregrqlqqhd-F~SQIfSLg 599 (705)
T KOG0639|consen 522 KVCFSCCSDGNIAVWDLHNQTLVRQFQG-HTDGASCIDISKDGTKLWTGGLDNTVRCWDLREGRQLQQHD-FSSQIFSLG 599 (705)
T ss_pred ceeeeeccCCcEEEEEcccceeeecccC-CCCCceeEEecCCCceeecCCCccceeehhhhhhhhhhhhh-hhhhheecc
Confidence 4567899999999999999999999988 88889999999999999999999999999999998777665 456666666
Q ss_pred EeC
Q psy7058 82 FCD 84 (85)
Q Consensus 82 ~~~ 84 (85)
+.|
T Consensus 600 ~cP 602 (705)
T KOG0639|consen 600 YCP 602 (705)
T ss_pred cCC
Confidence 555
No 84
>KOG0310|consensus
Probab=99.53 E-value=3.9e-14 Score=76.55 Aligned_cols=83 Identities=24% Similarity=0.388 Sum_probs=72.3
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecC-CCCEEEEEcCCCeEEEEEcCCccccccccccccceeE
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTL-DSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITS 79 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~ 79 (85)
|+++++|...|.++++|..+...++.+.. |..++..+.|+| +...+++|++|+.+++||+.+.-....+.+|++.|++
T Consensus 80 G~LlaaGD~sG~V~vfD~k~r~iLR~~~a-h~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a~v~~~l~~htDYVR~ 158 (487)
T KOG0310|consen 80 GRLLAAGDESGHVKVFDMKSRVILRQLYA-HQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTAYVQAELSGHTDYVRC 158 (487)
T ss_pred CeEEEccCCcCcEEEeccccHHHHHHHhh-ccCceeEEEecccCCeEEEecCCCceEEEEEcCCcEEEEEecCCcceeEe
Confidence 67899999999999999776566667766 899999999999 4567889999999999999988876688899999999
Q ss_pred EEEeC
Q psy7058 80 LAFCD 84 (85)
Q Consensus 80 ~~~~~ 84 (85)
.+|+|
T Consensus 159 g~~~~ 163 (487)
T KOG0310|consen 159 GDISP 163 (487)
T ss_pred ecccc
Confidence 99987
No 85
>KOG1539|consensus
Probab=99.51 E-value=3.7e-14 Score=80.76 Aligned_cols=81 Identities=28% Similarity=0.405 Sum_probs=71.9
Q ss_pred eeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEEEE
Q psy7058 3 LLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSLAF 82 (85)
Q Consensus 3 ~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~~ 82 (85)
.++.+..|-.|.++|+.+.+.++.+.+ |...|++++|+|||+++++++.|++|++||+.++..+-.+. -..++.+++|
T Consensus 548 l~a~~~ddf~I~vvD~~t~kvvR~f~g-h~nritd~~FS~DgrWlisasmD~tIr~wDlpt~~lID~~~-vd~~~~sls~ 625 (910)
T KOG1539|consen 548 LLAIALDDFSIRVVDVVTRKVVREFWG-HGNRITDMTFSPDGRWLISASMDSTIRTWDLPTGTLIDGLL-VDSPCTSLSF 625 (910)
T ss_pred hhhhhcCceeEEEEEchhhhhhHHhhc-cccceeeeEeCCCCcEEEEeecCCcEEEEeccCcceeeeEe-cCCcceeeEE
Confidence 456777888999999999999999988 88999999999999999999999999999999998876665 5678888888
Q ss_pred eCC
Q psy7058 83 CDF 85 (85)
Q Consensus 83 ~~~ 85 (85)
+|.
T Consensus 626 SPn 628 (910)
T KOG1539|consen 626 SPN 628 (910)
T ss_pred CCC
Confidence 884
No 86
>KOG0267|consensus
Probab=99.51 E-value=4.5e-14 Score=79.55 Aligned_cols=84 Identities=20% Similarity=0.460 Sum_probs=76.5
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEE
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSL 80 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~ 80 (85)
|.+.+.++.|..+++||.+...+...+.. |...+..+.|+|+|.+++.+++|..+++||...++....|..|+..+..+
T Consensus 124 ~~~~a~gStdtd~~iwD~Rk~Gc~~~~~s-~~~vv~~l~lsP~Gr~v~~g~ed~tvki~d~~agk~~~ef~~~e~~v~sl 202 (825)
T KOG0267|consen 124 GEFFASGSTDTDLKIWDIRKKGCSHTYKS-HTRVVDVLRLSPDGRWVASGGEDNTVKIWDLTAGKLSKEFKSHEGKVQSL 202 (825)
T ss_pred eEEeccccccccceehhhhccCceeeecC-CcceeEEEeecCCCceeeccCCcceeeeeccccccccccccccccccccc
Confidence 35678899999999999998888888887 88889999999999999999999999999999999999999999999999
Q ss_pred EEeCC
Q psy7058 81 AFCDF 85 (85)
Q Consensus 81 ~~~~~ 85 (85)
.|+|+
T Consensus 203 e~hp~ 207 (825)
T KOG0267|consen 203 EFHPL 207 (825)
T ss_pred ccCch
Confidence 88874
No 87
>KOG0296|consensus
Probab=99.51 E-value=5.9e-13 Score=70.24 Aligned_cols=82 Identities=22% Similarity=0.301 Sum_probs=70.5
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEEE
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSLA 81 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~ 81 (85)
+++++|+.|..-++|+..++.....+.+ |+..|.++.|+.+|.++++|+.+|.|++|...++.....+......+-=+.
T Consensus 77 ~l~aTGGgDD~AflW~~~~ge~~~eltg-HKDSVt~~~FshdgtlLATGdmsG~v~v~~~stg~~~~~~~~e~~dieWl~ 155 (399)
T KOG0296|consen 77 NLVATGGGDDLAFLWDISTGEFAGELTG-HKDSVTCCSFSHDGTLLATGDMSGKVLVFKVSTGGEQWKLDQEVEDIEWLK 155 (399)
T ss_pred ceEEecCCCceEEEEEccCCcceeEecC-CCCceEEEEEccCceEEEecCCCccEEEEEcccCceEEEeecccCceEEEE
Confidence 5789999999999999999998888777 889999999999999999999999999999999887777764445555555
Q ss_pred EeC
Q psy7058 82 FCD 84 (85)
Q Consensus 82 ~~~ 84 (85)
|+|
T Consensus 156 WHp 158 (399)
T KOG0296|consen 156 WHP 158 (399)
T ss_pred ecc
Confidence 655
No 88
>KOG0278|consensus
Probab=99.51 E-value=5.2e-13 Score=67.97 Aligned_cols=83 Identities=20% Similarity=0.310 Sum_probs=65.8
Q ss_pred eeEEeeCCCcEEEeeCCCceeeeeeeccC--------------------------------------CCcEEEEEecCCC
Q psy7058 3 LLATTSADQTARIWNTEDFSLVRELGTAN--------------------------------------QRWVWDAAFTLDS 44 (85)
Q Consensus 3 ~l~~~~~~~~i~~~d~~~~~~~~~~~~~~--------------------------------------~~~~~~~~~~~~~ 44 (85)
-+++++.|+.+++||.++++.+.++...+ +..|.+..++|+.
T Consensus 157 ~iLSSadd~tVRLWD~rTgt~v~sL~~~s~VtSlEvs~dG~ilTia~gssV~Fwdaksf~~lKs~k~P~nV~SASL~P~k 236 (334)
T KOG0278|consen 157 CILSSADDKTVRLWDHRTGTEVQSLEFNSPVTSLEVSQDGRILTIAYGSSVKFWDAKSFGLLKSYKMPCNVESASLHPKK 236 (334)
T ss_pred eEEeeccCCceEEEEeccCcEEEEEecCCCCcceeeccCCCEEEEecCceeEEeccccccceeeccCccccccccccCCC
Confidence 46777899999999999998877764211 1234556677777
Q ss_pred CEEEEEcCCCeEEEEEcCCccccccc-cccccceeEEEEeCC
Q psy7058 45 KFLLTASSDGVARLWNIETGEVDKEY-SGHQKAITSLAFCDF 85 (85)
Q Consensus 45 ~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~ 85 (85)
..++.|+.|..++.||..++..+..+ ++|.++|.|++|+|.
T Consensus 237 ~~fVaGged~~~~kfDy~TgeEi~~~nkgh~gpVhcVrFSPd 278 (334)
T KOG0278|consen 237 EFFVAGGEDFKVYKFDYNTGEEIGSYNKGHFGPVHCVRFSPD 278 (334)
T ss_pred ceEEecCcceEEEEEeccCCceeeecccCCCCceEEEEECCC
Confidence 78888888889999999888888876 789999999999984
No 89
>KOG0303|consensus
Probab=99.51 E-value=1e-13 Score=73.85 Aligned_cols=71 Identities=25% Similarity=0.384 Sum_probs=63.6
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccc
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQ 74 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 74 (85)
+.|++++.|..+.+|++.+++....+. |...|.++.|+.+|..+++.+.|+.|++||.+.++.+..-.+|.
T Consensus 145 NVLlsag~Dn~v~iWnv~tgeali~l~--hpd~i~S~sfn~dGs~l~TtckDKkvRv~dpr~~~~v~e~~~he 215 (472)
T KOG0303|consen 145 NVLLSAGSDNTVSIWNVGTGEALITLD--HPDMVYSMSFNRDGSLLCTTCKDKKVRVIDPRRGTVVSEGVAHE 215 (472)
T ss_pred hhHhhccCCceEEEEeccCCceeeecC--CCCeEEEEEeccCCceeeeecccceeEEEcCCCCcEeeeccccc
Confidence 457899999999999999999888876 88999999999999999999999999999999998776655554
No 90
>KOG0306|consensus
Probab=99.50 E-value=4.7e-13 Score=75.95 Aligned_cols=83 Identities=23% Similarity=0.413 Sum_probs=78.4
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEE
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSL 80 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~ 80 (85)
|++|+.+--|.++++|-+.+.+....+.+ |.-|+.++..+||+..++||+.|+.|++|-+.-|.+.+.+-+|.+.|.++
T Consensus 520 gk~LaVsLLdnTVkVyflDtlKFflsLYG-HkLPV~smDIS~DSklivTgSADKnVKiWGLdFGDCHKS~fAHdDSvm~V 598 (888)
T KOG0306|consen 520 GKLLAVSLLDNTVKVYFLDTLKFFLSLYG-HKLPVLSMDISPDSKLIVTGSADKNVKIWGLDFGDCHKSFFAHDDSVMSV 598 (888)
T ss_pred CcEEEEEeccCeEEEEEecceeeeeeecc-cccceeEEeccCCcCeEEeccCCCceEEeccccchhhhhhhcccCceeEE
Confidence 57889999999999999999998888888 99999999999999999999999999999999999999999999999999
Q ss_pred EEeC
Q psy7058 81 AFCD 84 (85)
Q Consensus 81 ~~~~ 84 (85)
.|-|
T Consensus 599 ~F~P 602 (888)
T KOG0306|consen 599 QFLP 602 (888)
T ss_pred EEcc
Confidence 9977
No 91
>KOG0293|consensus
Probab=99.49 E-value=2e-13 Score=73.24 Aligned_cols=85 Identities=22% Similarity=0.395 Sum_probs=69.9
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccC-CCcEEEEEecC-CCCEEEEEcCCCeEEEEEcCCcccccccccccccee
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTAN-QRWVWDAAFTL-DSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAIT 78 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~ 78 (85)
|+++++.-.+..+.+||+.....+.++.+.. ...+..-+|.. +..++++|++|+.|+||+..+++++..+.+|...|+
T Consensus 407 ~k~~LvnL~~qei~LWDl~e~~lv~kY~Ghkq~~fiIrSCFgg~~~~fiaSGSED~kvyIWhr~sgkll~~LsGHs~~vN 486 (519)
T KOG0293|consen 407 GKLALVNLQDQEIHLWDLEENKLVRKYFGHKQGHFIIRSCFGGGNDKFIASGSEDSKVYIWHRISGKLLAVLSGHSKTVN 486 (519)
T ss_pred CcEEEEEcccCeeEEeecchhhHHHHhhcccccceEEEeccCCCCcceEEecCCCceEEEEEccCCceeEeecCCcceee
Confidence 3456666778899999999777777777622 23466667765 558899999999999999999999999999999999
Q ss_pred EEEEeCC
Q psy7058 79 SLAFCDF 85 (85)
Q Consensus 79 ~~~~~~~ 85 (85)
+++|+|.
T Consensus 487 cVswNP~ 493 (519)
T KOG0293|consen 487 CVSWNPA 493 (519)
T ss_pred EEecCCC
Confidence 9999983
No 92
>KOG0278|consensus
Probab=99.49 E-value=4e-13 Score=68.38 Aligned_cols=66 Identities=17% Similarity=0.252 Sum_probs=59.0
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCcccc
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVD 67 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 67 (85)
+.++.|++|..++.||..+++.+.....+|.++|.+++|+|+|...++|++||+|++|....++..
T Consensus 237 ~~fVaGged~~~~kfDy~TgeEi~~~nkgh~gpVhcVrFSPdGE~yAsGSEDGTirlWQt~~~~~~ 302 (334)
T KOG0278|consen 237 EFFVAGGEDFKVYKFDYNTGEEIGSYNKGHFGPVHCVRFSPDGELYASGSEDGTIRLWQTTPGKTY 302 (334)
T ss_pred ceEEecCcceEEEEEeccCCceeeecccCCCCceEEEEECCCCceeeccCCCceEEEEEecCCCch
Confidence 357899999999999999999998874458899999999999999999999999999999876644
No 93
>KOG0310|consensus
Probab=99.49 E-value=9.6e-13 Score=71.35 Aligned_cols=81 Identities=21% Similarity=0.343 Sum_probs=67.0
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecC-CCCEEEEEcCCCeEEEEEcCCc-cccccccccccceeE
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTL-DSKFLLTASSDGVARLWNIETG-EVDKEYSGHQKAITS 79 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~v~~ 79 (85)
..+++|+.|..+++||+.+......+.+ |...+.+.+++| .++++++|+-||.|++||++.. ..+.++. |..+|-.
T Consensus 124 t~l~s~sDd~v~k~~d~s~a~v~~~l~~-htDYVR~g~~~~~~~hivvtGsYDg~vrl~DtR~~~~~v~eln-hg~pVe~ 201 (487)
T KOG0310|consen 124 TMLVSGSDDKVVKYWDLSTAYVQAELSG-HTDYVRCGDISPANDHIVVTGSYDGKVRLWDTRSLTSRVVELN-HGCPVES 201 (487)
T ss_pred eEEEecCCCceEEEEEcCCcEEEEEecC-CcceeEeeccccCCCeEEEecCCCceEEEEEeccCCceeEEec-CCCceee
Confidence 4578899999999999998886445555 899999999999 4668999999999999999987 5666676 7888877
Q ss_pred EEEeC
Q psy7058 80 LAFCD 84 (85)
Q Consensus 80 ~~~~~ 84 (85)
+.+-|
T Consensus 202 vl~lp 206 (487)
T KOG0310|consen 202 VLALP 206 (487)
T ss_pred EEEcC
Confidence 76644
No 94
>KOG1034|consensus
Probab=99.49 E-value=2.4e-13 Score=71.05 Aligned_cols=82 Identities=23% Similarity=0.325 Sum_probs=72.8
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCC-CEEEEEcCCCeEEEEEcCCccccccc---cccccce
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDS-KFLLTASSDGVARLWNIETGEVDKEY---SGHQKAI 77 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~---~~~~~~v 77 (85)
.+++.++.-|.|++.|..+++....+.+ |...|+.+.+.|+. +++++++.|..|++|++++..++..+ .+|.+.|
T Consensus 106 p~la~~G~~GvIrVid~~~~~~~~~~~g-hG~sINeik~~p~~~qlvls~SkD~svRlwnI~~~~Cv~VfGG~egHrdeV 184 (385)
T KOG1034|consen 106 PFLAAGGYLGVIRVIDVVSGQCSKNYRG-HGGSINEIKFHPDRPQLVLSASKDHSVRLWNIQTDVCVAVFGGVEGHRDEV 184 (385)
T ss_pred eeEEeecceeEEEEEecchhhhccceec-cCccchhhhcCCCCCcEEEEecCCceEEEEeccCCeEEEEecccccccCcE
Confidence 3688899999999999999999988888 88899999999965 67889999999999999999887665 4789999
Q ss_pred eEEEEeC
Q psy7058 78 TSLAFCD 84 (85)
Q Consensus 78 ~~~~~~~ 84 (85)
.++.|++
T Consensus 185 LSvD~~~ 191 (385)
T KOG1034|consen 185 LSVDFSL 191 (385)
T ss_pred EEEEEcC
Confidence 9999975
No 95
>KOG0294|consensus
Probab=99.49 E-value=6.1e-13 Score=69.22 Aligned_cols=80 Identities=24% Similarity=0.366 Sum_probs=65.9
Q ss_pred eeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEEEE
Q psy7058 3 LLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSLAF 82 (85)
Q Consensus 3 ~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~~ 82 (85)
.|++|+.||.|.+|++..++.+..++. |...|+.++.+|.+++.++.+.|+.++.|++-.++....++- ...-..+.|
T Consensus 99 hLlS~sdDG~i~iw~~~~W~~~~slK~-H~~~Vt~lsiHPS~KLALsVg~D~~lr~WNLV~Gr~a~v~~L-~~~at~v~w 176 (362)
T KOG0294|consen 99 HLLSGSDDGHIIIWRVGSWELLKSLKA-HKGQVTDLSIHPSGKLALSVGGDQVLRTWNLVRGRVAFVLNL-KNKATLVSW 176 (362)
T ss_pred heeeecCCCcEEEEEcCCeEEeeeecc-cccccceeEecCCCceEEEEcCCceeeeehhhcCccceeecc-CCcceeeEE
Confidence 689999999999999999999999988 777799999999999999999999999999988875544441 122223666
Q ss_pred eC
Q psy7058 83 CD 84 (85)
Q Consensus 83 ~~ 84 (85)
+|
T Consensus 177 ~~ 178 (362)
T KOG0294|consen 177 SP 178 (362)
T ss_pred cC
Confidence 55
No 96
>KOG0267|consensus
Probab=99.48 E-value=2.4e-14 Score=80.56 Aligned_cols=82 Identities=24% Similarity=0.441 Sum_probs=75.7
Q ss_pred eeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEEEE
Q psy7058 3 LLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSLAF 82 (85)
Q Consensus 3 ~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~~ 82 (85)
+|++|+.+|.|++||+...+.++.+.+ |...+.++.|+|-+.+++.++.|..+.+||++...+...+.+|...+..++|
T Consensus 84 LlaagsasgtiK~wDleeAk~vrtLtg-h~~~~~sv~f~P~~~~~a~gStdtd~~iwD~Rk~Gc~~~~~s~~~vv~~l~l 162 (825)
T KOG0267|consen 84 LLAAGSASGTIKVWDLEEAKIVRTLTG-HLLNITSVDFHPYGEFFASGSTDTDLKIWDIRKKGCSHTYKSHTRVVDVLRL 162 (825)
T ss_pred hhcccccCCceeeeehhhhhhhhhhhc-cccCcceeeeccceEEeccccccccceehhhhccCceeeecCCcceeEEEee
Confidence 578899999999999999998888877 7778999999999999999999999999999988899999999999999999
Q ss_pred eCC
Q psy7058 83 CDF 85 (85)
Q Consensus 83 ~~~ 85 (85)
+|+
T Consensus 163 sP~ 165 (825)
T KOG0267|consen 163 SPD 165 (825)
T ss_pred cCC
Confidence 985
No 97
>KOG1446|consensus
Probab=99.48 E-value=1.3e-12 Score=67.72 Aligned_cols=85 Identities=22% Similarity=0.320 Sum_probs=71.4
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCC--CcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccc-cccce
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQ--RWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSG-HQKAI 77 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~v 77 (85)
|+.++.+...+.+++.|..+|.....+..... ..-...++.||++++++++.||+|.+|++.++.....+.+ +..++
T Consensus 199 GK~iLlsT~~s~~~~lDAf~G~~~~tfs~~~~~~~~~~~a~ftPds~Fvl~gs~dg~i~vw~~~tg~~v~~~~~~~~~~~ 278 (311)
T KOG1446|consen 199 GKSILLSTNASFIYLLDAFDGTVKSTFSGYPNAGNLPLSATFTPDSKFVLSGSDDGTIHVWNLETGKKVAVLRGPNGGPV 278 (311)
T ss_pred CCEEEEEeCCCcEEEEEccCCcEeeeEeeccCCCCcceeEEECCCCcEEEEecCCCcEEEEEcCCCcEeeEecCCCCCCc
Confidence 67888889999999999999998777765211 1125678999999999999999999999999999888887 68899
Q ss_pred eEEEEeCC
Q psy7058 78 TSLAFCDF 85 (85)
Q Consensus 78 ~~~~~~~~ 85 (85)
.++.|+|.
T Consensus 279 ~~~~fnP~ 286 (311)
T KOG1446|consen 279 SCVRFNPR 286 (311)
T ss_pred cccccCCc
Confidence 99999983
No 98
>KOG0644|consensus
Probab=99.48 E-value=2.5e-14 Score=81.85 Aligned_cols=83 Identities=25% Similarity=0.398 Sum_probs=78.5
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEE
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSL 80 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~ 80 (85)
|.++++++.|..+++|...+..+.....+ |...++.++.+.+..++++++-|..|++|.++.+.++..+.+|++.|+++
T Consensus 202 g~~Iitgsdd~lvKiwS~et~~~lAs~rG-hs~ditdlavs~~n~~iaaaS~D~vIrvWrl~~~~pvsvLrghtgavtai 280 (1113)
T KOG0644|consen 202 GRYIITGSDDRLVKIWSMETARCLASCRG-HSGDITDLAVSSNNTMIAAASNDKVIRVWRLPDGAPVSVLRGHTGAVTAI 280 (1113)
T ss_pred cceEeecCccceeeeeeccchhhhccCCC-CccccchhccchhhhhhhhcccCceEEEEecCCCchHHHHhccccceeee
Confidence 56899999999999999999999999888 88889999999999999999999999999999999999999999999999
Q ss_pred EEeC
Q psy7058 81 AFCD 84 (85)
Q Consensus 81 ~~~~ 84 (85)
+|+|
T Consensus 281 afsP 284 (1113)
T KOG0644|consen 281 AFSP 284 (1113)
T ss_pred ccCc
Confidence 9998
No 99
>KOG0646|consensus
Probab=99.47 E-value=1.1e-12 Score=70.92 Aligned_cols=52 Identities=19% Similarity=0.331 Sum_probs=47.4
Q ss_pred cEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEEEEeCC
Q psy7058 34 WVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSLAFCDF 85 (85)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 85 (85)
.|+|++++-||..+++|+.||.+++||+.+.++++++....++|+.+.++|+
T Consensus 279 ~ITcLais~DgtlLlSGd~dg~VcvWdi~S~Q~iRtl~~~kgpVtnL~i~~~ 330 (476)
T KOG0646|consen 279 AITCLAISTDGTLLLSGDEDGKVCVWDIYSKQCIRTLQTSKGPVTNLQINPL 330 (476)
T ss_pred ceeEEEEecCccEEEeeCCCCCEEEEecchHHHHHHHhhhccccceeEeecc
Confidence 7999999999999999999999999999999999988877889988888653
No 100
>KOG0305|consensus
Probab=99.46 E-value=1.1e-12 Score=72.08 Aligned_cols=83 Identities=20% Similarity=0.235 Sum_probs=70.6
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecC-CCCEEEEEc--CCCeEEEEEcCCccccccccccccce
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTL-DSKFLLTAS--SDGVARLWNIETGEVDKEYSGHQKAI 77 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~~v 77 (85)
+.++|+|++|+.+.+||.....+...+.. |...+..++|+| ....||+|+ .|+.|++||...+..+.... ....|
T Consensus 313 ~~~lASGgnDN~~~Iwd~~~~~p~~~~~~-H~aAVKA~awcP~q~~lLAsGGGs~D~~i~fwn~~~g~~i~~vd-tgsQV 390 (484)
T KOG0305|consen 313 GNQLASGGNDNVVFIWDGLSPEPKFTFTE-HTAAVKALAWCPWQSGLLATGGGSADRCIKFWNTNTGARIDSVD-TGSQV 390 (484)
T ss_pred CCeeccCCCccceEeccCCCccccEEEec-cceeeeEeeeCCCccCceEEcCCCcccEEEEEEcCCCcEecccc-cCCce
Confidence 46899999999999999987777777777 888899999999 677788764 68999999999998887776 56788
Q ss_pred eEEEEeCC
Q psy7058 78 TSLAFCDF 85 (85)
Q Consensus 78 ~~~~~~~~ 85 (85)
..+.|++.
T Consensus 391 csL~Wsk~ 398 (484)
T KOG0305|consen 391 CSLIWSKK 398 (484)
T ss_pred eeEEEcCC
Confidence 88888763
No 101
>KOG0973|consensus
Probab=99.46 E-value=7.4e-13 Score=76.78 Aligned_cols=83 Identities=27% Similarity=0.415 Sum_probs=72.8
Q ss_pred CceeEEeeCCCcEEEeeCCC------------------ceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcC
Q psy7058 1 MGLLATTSADQTARIWNTED------------------FSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIE 62 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 62 (85)
|++||+|+.|+.+.+|+... .+....+.+ |...|..++|+|++.++++++.|+.|.+|+.+
T Consensus 81 G~~lAsGSDD~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~-H~~DV~Dv~Wsp~~~~lvS~s~DnsViiwn~~ 159 (942)
T KOG0973|consen 81 GSYLASGSDDRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRG-HDSDVLDVNWSPDDSLLVSVSLDNSVIIWNAK 159 (942)
T ss_pred CCeEeeccCcceEEEeeecccCCcccccccccccccceeeEEEEEec-CCCccceeccCCCccEEEEecccceEEEEccc
Confidence 68899999999999998762 123444555 88889999999999999999999999999999
Q ss_pred CccccccccccccceeEEEEeC
Q psy7058 63 TGEVDKEYSGHQKAITSLAFCD 84 (85)
Q Consensus 63 ~~~~~~~~~~~~~~v~~~~~~~ 84 (85)
+.+.+..+.+|...|..+.|.|
T Consensus 160 tF~~~~vl~~H~s~VKGvs~DP 181 (942)
T KOG0973|consen 160 TFELLKVLRGHQSLVKGVSWDP 181 (942)
T ss_pred cceeeeeeecccccccceEECC
Confidence 9999999999999999999977
No 102
>KOG0772|consensus
Probab=99.46 E-value=5.8e-13 Score=73.11 Aligned_cols=83 Identities=25% Similarity=0.335 Sum_probs=61.7
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeee-----ccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccc---ccccccc
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELG-----TANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEV---DKEYSGH 73 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~---~~~~~~~ 73 (85)
+.+++++.|+++++||+...+....+. +...-++....|++++..+++++.||.|.+|+....-. ...-.+|
T Consensus 282 ~~FlT~s~DgtlRiWdv~~~k~q~qVik~k~~~g~Rv~~tsC~~nrdg~~iAagc~DGSIQ~W~~~~~~v~p~~~vk~AH 361 (641)
T KOG0772|consen 282 EEFLTCSYDGTLRIWDVNNTKSQLQVIKTKPAGGKRVPVTSCAWNRDGKLIAAGCLDGSIQIWDKGSRTVRPVMKVKDAH 361 (641)
T ss_pred cceEEecCCCcEEEEecCCchhheeEEeeccCCCcccCceeeecCCCcchhhhcccCCceeeeecCCcccccceEeeecc
Confidence 357899999999999998765432221 12334678899999999999999999999999754322 1223356
Q ss_pred cc--ceeEEEEeC
Q psy7058 74 QK--AITSLAFCD 84 (85)
Q Consensus 74 ~~--~v~~~~~~~ 84 (85)
.. .|++++||+
T Consensus 362 ~~g~~Itsi~FS~ 374 (641)
T KOG0772|consen 362 LPGQDITSISFSY 374 (641)
T ss_pred CCCCceeEEEecc
Confidence 55 999999986
No 103
>KOG0306|consensus
Probab=99.45 E-value=5.6e-13 Score=75.63 Aligned_cols=83 Identities=23% Similarity=0.340 Sum_probs=77.8
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEEE
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSLA 81 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~ 81 (85)
++++||+.|..+++|-+.-|.+-..+.+ |...|.++.|-|+...+.+++.|+.++.||-..-..++++.+|...|++++
T Consensus 563 klivTgSADKnVKiWGLdFGDCHKS~fA-HdDSvm~V~F~P~~~~FFt~gKD~kvKqWDg~kFe~iq~L~~H~~ev~cLa 641 (888)
T KOG0306|consen 563 KLIVTGSADKNVKIWGLDFGDCHKSFFA-HDDSVMSVQFLPKTHLFFTCGKDGKVKQWDGEKFEEIQKLDGHHSEVWCLA 641 (888)
T ss_pred CeEEeccCCCceEEeccccchhhhhhhc-ccCceeEEEEcccceeEEEecCcceEEeechhhhhhheeeccchheeeeeE
Confidence 5789999999999999999999888887 888899999999999999999999999999999999999999999999999
Q ss_pred EeCC
Q psy7058 82 FCDF 85 (85)
Q Consensus 82 ~~~~ 85 (85)
.+|.
T Consensus 642 v~~~ 645 (888)
T KOG0306|consen 642 VSPN 645 (888)
T ss_pred EcCC
Confidence 8774
No 104
>KOG1407|consensus
Probab=99.45 E-value=1.3e-12 Score=66.73 Aligned_cols=80 Identities=16% Similarity=0.270 Sum_probs=70.1
Q ss_pred eEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEEEEe
Q psy7058 4 LATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSLAFC 83 (85)
Q Consensus 4 l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~ 83 (85)
++...-.|++.+...+..+++..+.. |+....++.|+|+|+++++|+.|..+.+||+...-+++.+.-+.-+|+.++||
T Consensus 162 Fflt~GlG~v~ILsypsLkpv~si~A-H~snCicI~f~p~GryfA~GsADAlvSLWD~~ELiC~R~isRldwpVRTlSFS 240 (313)
T KOG1407|consen 162 FFLTNGLGCVEILSYPSLKPVQSIKA-HPSNCICIEFDPDGRYFATGSADALVSLWDVDELICERCISRLDWPVRTLSFS 240 (313)
T ss_pred EEEecCCceEEEEecccccccccccc-CCcceEEEEECCCCceEeeccccceeeccChhHhhhheeeccccCceEEEEec
Confidence 33344457888888888889999888 88888999999999999999999999999999999999999899999999997
Q ss_pred C
Q psy7058 84 D 84 (85)
Q Consensus 84 ~ 84 (85)
.
T Consensus 241 ~ 241 (313)
T KOG1407|consen 241 H 241 (313)
T ss_pred c
Confidence 4
No 105
>KOG0313|consensus
Probab=99.45 E-value=4.3e-13 Score=71.08 Aligned_cols=80 Identities=29% Similarity=0.465 Sum_probs=70.2
Q ss_pred eeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCcc---ccccccccccceeE
Q psy7058 3 LLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGE---VDKEYSGHQKAITS 79 (85)
Q Consensus 3 ~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---~~~~~~~~~~~v~~ 79 (85)
.+.+++.|++|+.||+.++.....+.. +..++++..+|...++++|+.|..+++||.+.+. ..+++-+|+.=|..
T Consensus 273 v~yS~SwDHTIk~WDletg~~~~~~~~--~ksl~~i~~~~~~~Ll~~gssdr~irl~DPR~~~gs~v~~s~~gH~nwVss 350 (423)
T KOG0313|consen 273 VIYSVSWDHTIKVWDLETGGLKSTLTT--NKSLNCISYSPLSKLLASGSSDRHIRLWDPRTGDGSVVSQSLIGHKNWVSS 350 (423)
T ss_pred ceEeecccceEEEEEeecccceeeeec--CcceeEeecccccceeeecCCCCceeecCCCCCCCceeEEeeecchhhhhh
Confidence 468999999999999999998888775 4569999999999999999999999999998653 44678899999999
Q ss_pred EEEeC
Q psy7058 80 LAFCD 84 (85)
Q Consensus 80 ~~~~~ 84 (85)
+.|+|
T Consensus 351 vkwsp 355 (423)
T KOG0313|consen 351 VKWSP 355 (423)
T ss_pred eecCC
Confidence 99987
No 106
>KOG2110|consensus
Probab=99.45 E-value=3.3e-12 Score=67.58 Aligned_cols=76 Identities=22% Similarity=0.319 Sum_probs=66.1
Q ss_pred CCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCe-EEEEEcCCcccccccccc--ccceeEEEEeCC
Q psy7058 9 ADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGV-ARLWNIETGEVDKEYSGH--QKAITSLAFCDF 85 (85)
Q Consensus 9 ~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~ 85 (85)
..|.+.+||+.+.++...+.. |.+.+.+++|+++|.+++++++.|+ ||+|.+.+++.+.+|+-. .-.|.+++|+|.
T Consensus 151 t~GdV~l~d~~nl~~v~~I~a-H~~~lAalafs~~G~llATASeKGTVIRVf~v~~G~kl~eFRRG~~~~~IySL~Fs~d 229 (391)
T KOG2110|consen 151 TSGDVVLFDTINLQPVNTINA-HKGPLAALAFSPDGTLLATASEKGTVIRVFSVPEGQKLYEFRRGTYPVSIYSLSFSPD 229 (391)
T ss_pred CCceEEEEEcccceeeeEEEe-cCCceeEEEECCCCCEEEEeccCceEEEEEEcCCccEeeeeeCCceeeEEEEEEECCC
Confidence 357899999999999999986 9999999999999999999999885 899999999998888733 346778888873
No 107
>KOG0270|consensus
Probab=99.45 E-value=2.7e-13 Score=72.85 Aligned_cols=85 Identities=20% Similarity=0.414 Sum_probs=66.3
Q ss_pred CceeEEeeCCCcEEEeeCCCc---eeeeeee-----------------ccCCCcEEEEEecCC-CCEEEEEcCCCeEEEE
Q psy7058 1 MGLLATTSADQTARIWNTEDF---SLVRELG-----------------TANQRWVWDAAFTLD-SKFLLTASSDGVARLW 59 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~---~~~~~~~-----------------~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~ 59 (85)
|+++|.|..+..|.+||+.-. .+...+. ..|...+..+.|+.. ...+++|+.|.+|.+|
T Consensus 192 gNyvAiGtmdp~IeIWDLDI~d~v~P~~~LGs~~sk~~~k~~k~~~~~~gHTdavl~Ls~n~~~~nVLaSgsaD~TV~lW 271 (463)
T KOG0270|consen 192 GNYVAIGTMDPEIEIWDLDIVDAVLPCVTLGSKASKKKKKKGKRSNSASGHTDAVLALSWNRNFRNVLASGSADKTVKLW 271 (463)
T ss_pred cceEEEeccCceeEEeccccccccccceeechhhhhhhhhhcccccccccchHHHHHHHhccccceeEEecCCCceEEEE
Confidence 689999999999999998421 1111111 013444556777774 4678899999999999
Q ss_pred EcCCccccccccccccceeEEEEeCC
Q psy7058 60 NIETGEVDKEYSGHQKAITSLAFCDF 85 (85)
Q Consensus 60 ~~~~~~~~~~~~~~~~~v~~~~~~~~ 85 (85)
|+.++++...+..|...|.+++|+|+
T Consensus 272 D~~~g~p~~s~~~~~k~Vq~l~wh~~ 297 (463)
T KOG0270|consen 272 DVDTGKPKSSITHHGKKVQTLEWHPY 297 (463)
T ss_pred EcCCCCcceehhhcCCceeEEEecCC
Confidence 99999999999999999999999985
No 108
>KOG0646|consensus
Probab=99.45 E-value=8.5e-13 Score=71.28 Aligned_cols=82 Identities=20% Similarity=0.269 Sum_probs=70.2
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcC---------Ccccccccc
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIE---------TGEVDKEYS 71 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~---------~~~~~~~~~ 71 (85)
|.+|+.|.-.+.|++|.+.+|.....+.. |-..|+++.|+.|+.++++++.||.|.+|.+. +.+++..+.
T Consensus 93 G~~l~ag~i~g~lYlWelssG~LL~v~~a-HYQ~ITcL~fs~dgs~iiTgskDg~V~vW~l~~lv~a~~~~~~~p~~~f~ 171 (476)
T KOG0646|consen 93 GYFLLAGTISGNLYLWELSSGILLNVLSA-HYQSITCLKFSDDGSHIITGSKDGAVLVWLLTDLVSADNDHSVKPLHIFS 171 (476)
T ss_pred ceEEEeecccCcEEEEEeccccHHHHHHh-hccceeEEEEeCCCcEEEecCCCccEEEEEEEeecccccCCCccceeeec
Confidence 45777777999999999999999998876 76779999999999999999999999999874 235677788
Q ss_pred ccccceeEEEEe
Q psy7058 72 GHQKAITSLAFC 83 (85)
Q Consensus 72 ~~~~~v~~~~~~ 83 (85)
.|.-+|+++...
T Consensus 172 ~HtlsITDl~ig 183 (476)
T KOG0646|consen 172 DHTLSITDLQIG 183 (476)
T ss_pred cCcceeEEEEec
Confidence 899999887653
No 109
>KOG1408|consensus
Probab=99.44 E-value=3.1e-12 Score=72.90 Aligned_cols=83 Identities=22% Similarity=0.340 Sum_probs=76.5
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeecc--CCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeE
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTA--NQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITS 79 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~ 79 (85)
+++++++.|..|++||+.+++....+++. +.+....+...|.|.++++.+.|+++.++|..++++...+-+|.+.|+.
T Consensus 609 k~v~t~cQDrnirif~i~sgKq~k~FKgs~~~eG~lIKv~lDPSgiY~atScsdktl~~~Df~sgEcvA~m~GHsE~VTG 688 (1080)
T KOG1408|consen 609 KLVVTVCQDRNIRIFDIESGKQVKSFKGSRDHEGDLIKVILDPSGIYLATSCSDKTLCFVDFVSGECVAQMTGHSEAVTG 688 (1080)
T ss_pred ceEEEEecccceEEEeccccceeeeecccccCCCceEEEEECCCccEEEEeecCCceEEEEeccchhhhhhcCcchheee
Confidence 57899999999999999999999988873 4567889999999999999999999999999999999999999999999
Q ss_pred EEEeC
Q psy7058 80 LAFCD 84 (85)
Q Consensus 80 ~~~~~ 84 (85)
+.|.+
T Consensus 689 ~kF~n 693 (1080)
T KOG1408|consen 689 VKFLN 693 (1080)
T ss_pred eeecc
Confidence 99976
No 110
>KOG1034|consensus
Probab=99.44 E-value=1.5e-12 Score=68.19 Aligned_cols=62 Identities=24% Similarity=0.475 Sum_probs=56.8
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeec--cCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCC
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGT--ANQRWVWDAAFTLDSKFLLTASSDGVARLWNIET 63 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 63 (85)
+++++++.|..|++|++++..++..+.+ +|...|.++.|++++..+++++.|..+++|++..
T Consensus 149 qlvls~SkD~svRlwnI~~~~Cv~VfGG~egHrdeVLSvD~~~~gd~i~ScGmDhslk~W~l~~ 212 (385)
T KOG1034|consen 149 QLVLSASKDHSVRLWNIQTDVCVAVFGGVEGHRDEVLSVDFSLDGDRIASCGMDHSLKLWRLNV 212 (385)
T ss_pred cEEEEecCCceEEEEeccCCeEEEEecccccccCcEEEEEEcCCCCeeeccCCcceEEEEecCh
Confidence 5899999999999999999999887765 4778899999999999999999999999999973
No 111
>KOG1445|consensus
Probab=99.44 E-value=2.2e-13 Score=76.59 Aligned_cols=83 Identities=19% Similarity=0.301 Sum_probs=69.9
Q ss_pred ceeEEeeCCCcEEEeeCCCc-------eeeeeeeccCCCcEEEEEecC-CCCEEEEEcCCCeEEEEEcCCcccccccccc
Q psy7058 2 GLLATTSADQTARIWNTEDF-------SLVRELGTANQRWVWDAAFTL-DSKFLLTASSDGVARLWNIETGEVDKEYSGH 73 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~-------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 73 (85)
++|+.++.|+.|++|.+... ++...+.. |...|.+++|+| ....+++++.|.+|++||+.+++....+.+|
T Consensus 641 ~rLAVa~ddg~i~lWr~~a~gl~e~~~tPe~~lt~-h~eKI~slRfHPLAadvLa~asyd~Ti~lWDl~~~~~~~~l~gH 719 (1012)
T KOG1445|consen 641 ERLAVATDDGQINLWRLTANGLPENEMTPEKILTI-HGEKITSLRFHPLAADVLAVASYDSTIELWDLANAKLYSRLVGH 719 (1012)
T ss_pred HHeeecccCceEEEEEeccCCCCcccCCcceeeec-ccceEEEEEecchhhhHhhhhhccceeeeeehhhhhhhheeccC
Confidence 46899999999999998643 22223333 777899999999 5677889999999999999999999999999
Q ss_pred ccceeEEEEeCC
Q psy7058 74 QKAITSLAFCDF 85 (85)
Q Consensus 74 ~~~v~~~~~~~~ 85 (85)
.+.|..++|+|.
T Consensus 720 tdqIf~~AWSpd 731 (1012)
T KOG1445|consen 720 TDQIFGIAWSPD 731 (1012)
T ss_pred cCceeEEEECCC
Confidence 999999999984
No 112
>KOG0647|consensus
Probab=99.44 E-value=1.8e-12 Score=67.25 Aligned_cols=69 Identities=13% Similarity=0.250 Sum_probs=57.8
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCC--EEEEEcCCCeEEEEEcCCcccccccc
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSK--FLLTASSDGVARLWNIETGEVDKEYS 71 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~~~~~~~~~~~~~~~ 71 (85)
|..+++++.|+.+++||+.+++. .++.. |..++..+.|.+... .+++|+-|++|++||.++.+++.++.
T Consensus 84 gskVf~g~~Dk~~k~wDL~S~Q~-~~v~~-Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~pv~t~~ 154 (347)
T KOG0647|consen 84 GSKVFSGGCDKQAKLWDLASGQV-SQVAA-HDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSNPVATLQ 154 (347)
T ss_pred CceEEeeccCCceEEEEccCCCe-eeeee-cccceeEEEEecCCCcceeEecccccceeecccCCCCeeeeee
Confidence 56789999999999999999855 34444 888999999988655 78999999999999999887766554
No 113
>KOG0300|consensus
Probab=99.44 E-value=7.9e-13 Score=69.36 Aligned_cols=82 Identities=24% Similarity=0.378 Sum_probs=73.8
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCcc-ccccccccccceeE
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGE-VDKEYSGHQKAITS 79 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~v~~ 79 (85)
|+.+++++-|.+..+||+.+++++..+.+ |...++.++-+|..+++++.+.|.+.++||++... .+..|++|.+.|++
T Consensus 284 g~Q~vTaSWDRTAnlwDVEtge~v~~LtG-Hd~ELtHcstHptQrLVvTsSrDtTFRLWDFReaI~sV~VFQGHtdtVTS 362 (481)
T KOG0300|consen 284 GQQMVTASWDRTANLWDVETGEVVNILTG-HDSELTHCSTHPTQRLVVTSSRDTTFRLWDFREAIQSVAVFQGHTDTVTS 362 (481)
T ss_pred cceeeeeeccccceeeeeccCceeccccC-cchhccccccCCcceEEEEeccCceeEeccchhhcceeeeecccccceeE
Confidence 56789999999999999999999999887 88889999999999999999999999999998653 45679999999999
Q ss_pred EEEe
Q psy7058 80 LAFC 83 (85)
Q Consensus 80 ~~~~ 83 (85)
..|+
T Consensus 363 ~vF~ 366 (481)
T KOG0300|consen 363 VVFN 366 (481)
T ss_pred EEEe
Confidence 9886
No 114
>KOG0322|consensus
Probab=99.44 E-value=2.4e-12 Score=65.87 Aligned_cols=52 Identities=23% Similarity=0.149 Sum_probs=48.3
Q ss_pred cEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEEEEeCC
Q psy7058 34 WVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSLAFCDF 85 (85)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 85 (85)
.+..+...||++.+++++.|+.||+|..++++++..+..|...|++++|+|.
T Consensus 253 Gv~gvrIRpD~KIlATAGWD~RiRVyswrtl~pLAVLkyHsagvn~vAfspd 304 (323)
T KOG0322|consen 253 GVSGVRIRPDGKILATAGWDHRIRVYSWRTLNPLAVLKYHSAGVNAVAFSPD 304 (323)
T ss_pred CccceEEccCCcEEeecccCCcEEEEEeccCCchhhhhhhhcceeEEEeCCC
Confidence 3566888999999999999999999999999999999999999999999984
No 115
>KOG0290|consensus
Probab=99.43 E-value=4.3e-12 Score=65.77 Aligned_cols=62 Identities=29% Similarity=0.488 Sum_probs=50.5
Q ss_pred ceeEEeeCCCcEEEeeCCCcee--eeeeeccCCCcEEEEEecCCC-CEEEEEcCCCeEEEEEcCC
Q psy7058 2 GLLATTSADQTARIWNTEDFSL--VRELGTANQRWVWDAAFTLDS-KFLLTASSDGVARLWNIET 63 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~--~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~ 63 (85)
+++.+++-|.+..+||+.++.. +.+...+|...+..++|...+ ..|++++.||.+|+||++.
T Consensus 164 ~~igtSSiDTTCTiWdie~~~~~~vkTQLIAHDKEV~DIaf~~~s~~~FASvgaDGSvRmFDLR~ 228 (364)
T KOG0290|consen 164 NLIGTSSIDTTCTIWDIETGVSGTVKTQLIAHDKEVYDIAFLKGSRDVFASVGADGSVRMFDLRS 228 (364)
T ss_pred ceeEeecccCeEEEEEEeeccccceeeEEEecCcceeEEEeccCccceEEEecCCCcEEEEEecc
Confidence 5788999999999999998633 333333488899999999854 5789999999999999973
No 116
>KOG0268|consensus
Probab=99.42 E-value=4.7e-13 Score=70.79 Aligned_cols=80 Identities=11% Similarity=0.157 Sum_probs=70.2
Q ss_pred eeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCc-cccccccccccceeEEE
Q psy7058 3 LLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETG-EVDKEYSGHQKAITSLA 81 (85)
Q Consensus 3 ~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~v~~~~ 81 (85)
.|++++.|+.|.+||++...++.++.... .-+.++|+|.+-.+.++++|..++.||++.. .++..+.+|..+|.++.
T Consensus 202 ILas~~sDrsIvLyD~R~~~Pl~KVi~~m--RTN~IswnPeafnF~~a~ED~nlY~~DmR~l~~p~~v~~dhvsAV~dVd 279 (433)
T KOG0268|consen 202 ILASCASDRSIVLYDLRQASPLKKVILTM--RTNTICWNPEAFNFVAANEDHNLYTYDMRNLSRPLNVHKDHVSAVMDVD 279 (433)
T ss_pred heeeeccCCceEEEecccCCccceeeeec--cccceecCccccceeeccccccceehhhhhhcccchhhcccceeEEEec
Confidence 57888899999999999999988877533 3688999998888999999999999999875 56778889999999999
Q ss_pred EeC
Q psy7058 82 FCD 84 (85)
Q Consensus 82 ~~~ 84 (85)
|||
T Consensus 280 fsp 282 (433)
T KOG0268|consen 280 FSP 282 (433)
T ss_pred cCC
Confidence 998
No 117
>KOG0772|consensus
Probab=99.41 E-value=6e-13 Score=73.06 Aligned_cols=84 Identities=19% Similarity=0.291 Sum_probs=62.3
Q ss_pred CceeEEeeCCCcEEEeeCCCc--eeeeeeeccCCC--cEEEEEecCCCCEEEEEcCCCeEEEEEcCCccc-cccccc--c
Q psy7058 1 MGLLATTSADQTARIWNTEDF--SLVRELGTANQR--WVWDAAFTLDSKFLLTASSDGVARLWNIETGEV-DKEYSG--H 73 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~--~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~--~ 73 (85)
|+++|+|..||.|.+|+..+. .+...+..+|.. .|+++.|+++|++|++-+.|.++++||+++.+. +....+ .
T Consensus 329 g~~iAagc~DGSIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~D~tLKvWDLrq~kkpL~~~tgL~t 408 (641)
T KOG0772|consen 329 GKLIAAGCLDGSIQIWDKGSRTVRPVMKVKDAHLPGQDITSISFSYDGNYLLSRGFDDTLKVWDLRQFKKPLNVRTGLPT 408 (641)
T ss_pred cchhhhcccCCceeeeecCCcccccceEeeeccCCCCceeEEEeccccchhhhccCCCceeeeeccccccchhhhcCCCc
Confidence 467899999999999998654 344455555655 799999999999999999999999999997653 333222 1
Q ss_pred ccceeEEEEeC
Q psy7058 74 QKAITSLAFCD 84 (85)
Q Consensus 74 ~~~v~~~~~~~ 84 (85)
.-+-+.+.|||
T Consensus 409 ~~~~tdc~FSP 419 (641)
T KOG0772|consen 409 PFPGTDCCFSP 419 (641)
T ss_pred cCCCCccccCC
Confidence 22445566666
No 118
>KOG0299|consensus
Probab=99.40 E-value=1.5e-12 Score=70.36 Aligned_cols=80 Identities=24% Similarity=0.385 Sum_probs=72.9
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEE
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSL 80 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~ 80 (85)
|++|++|+.|..+.+|+..+.+.+..+.+ |...|.+++|-.....+++++.|+.+++|++.....+.++-+|++.|..+
T Consensus 214 gkylatgg~d~~v~Iw~~~t~ehv~~~~g-hr~~V~~L~fr~gt~~lys~s~Drsvkvw~~~~~s~vetlyGHqd~v~~I 292 (479)
T KOG0299|consen 214 GKYLATGGRDRHVQIWDCDTLEHVKVFKG-HRGAVSSLAFRKGTSELYSASADRSVKVWSIDQLSYVETLYGHQDGVLGI 292 (479)
T ss_pred CcEEEecCCCceEEEecCcccchhhcccc-cccceeeeeeecCccceeeeecCCceEEEehhHhHHHHHHhCCccceeee
Confidence 57899999999999999999999998877 88999999998888889999999999999999988888888999888766
Q ss_pred E
Q psy7058 81 A 81 (85)
Q Consensus 81 ~ 81 (85)
.
T Consensus 293 d 293 (479)
T KOG0299|consen 293 D 293 (479)
T ss_pred c
Confidence 4
No 119
>KOG0641|consensus
Probab=99.40 E-value=1.4e-11 Score=62.24 Aligned_cols=84 Identities=15% Similarity=0.169 Sum_probs=72.3
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCc----cccccccccccc
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETG----EVDKEYSGHQKA 76 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~~~~ 76 (85)
|++|++|..|....+||++.+.++.++.. |...|.++.|+|...++++++-|..|++-|++.. .++....+|.+.
T Consensus 243 grll~sg~~dssc~lydirg~r~iq~f~p-hsadir~vrfsp~a~yllt~syd~~ikltdlqgdla~el~~~vv~ehkdk 321 (350)
T KOG0641|consen 243 GRLLASGHADSSCMLYDIRGGRMIQRFHP-HSADIRCVRFSPGAHYLLTCSYDMKIKLTDLQGDLAHELPIMVVAEHKDK 321 (350)
T ss_pred cceeeeccCCCceEEEEeeCCceeeeeCC-CccceeEEEeCCCceEEEEecccceEEEeecccchhhcCceEEEEeccCc
Confidence 57899999999999999999999998887 8888999999999999999999999999998632 233445578889
Q ss_pred eeEEEEeCC
Q psy7058 77 ITSLAFCDF 85 (85)
Q Consensus 77 v~~~~~~~~ 85 (85)
+-.+.|+|.
T Consensus 322 ~i~~rwh~~ 330 (350)
T KOG0641|consen 322 AIQCRWHPQ 330 (350)
T ss_pred eEEEEecCc
Confidence 989999874
No 120
>KOG1007|consensus
Probab=99.39 E-value=7.8e-12 Score=64.82 Aligned_cols=81 Identities=27% Similarity=0.544 Sum_probs=63.6
Q ss_pred eeEEeeCCCcEEEeeCCCcee-eeeeeccCCCcEEEEEecCC-CCEEEEEcCCCeEEEEEcCCc----------------
Q psy7058 3 LLATTSADQTARIWNTEDFSL-VRELGTANQRWVWDAAFTLD-SKFLLTASSDGVARLWNIETG---------------- 64 (85)
Q Consensus 3 ~l~~~~~~~~i~~~d~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~---------------- 64 (85)
.|++|+.|+.+++||.+..+. +..+.. |...+++++|+|. ..++++++.|..+.++....-
T Consensus 229 ~lvt~gDdgyvriWD~R~tk~pv~el~~-HsHWvW~VRfn~~hdqLiLs~~SDs~V~Lsca~svSSE~qi~~~~dese~e 307 (370)
T KOG1007|consen 229 ILVTCGDDGYVRIWDTRKTKFPVQELPG-HSHWVWAVRFNPEHDQLILSGGSDSAVNLSCASSVSSEQQIEFEDDESESE 307 (370)
T ss_pred EEEEcCCCccEEEEeccCCCccccccCC-CceEEEEEEecCccceEEEecCCCceeEEEeccccccccccccccccccCc
Confidence 589999999999999987654 445554 8899999999995 567789999999999865311
Q ss_pred -------------cccccccccccceeEEEEeC
Q psy7058 65 -------------EVDKEYSGHQKAITSLAFCD 84 (85)
Q Consensus 65 -------------~~~~~~~~~~~~v~~~~~~~ 84 (85)
..+.++..|++.|++++|+.
T Consensus 308 ~~dseer~kpL~dg~l~tydehEDSVY~~aWSs 340 (370)
T KOG1007|consen 308 DEDSEERVKPLQDGQLETYDEHEDSVYALAWSS 340 (370)
T ss_pred chhhHHhcccccccccccccccccceEEEeecc
Confidence 12346678999999999973
No 121
>KOG4283|consensus
Probab=99.39 E-value=6.8e-12 Score=65.28 Aligned_cols=81 Identities=19% Similarity=0.391 Sum_probs=69.9
Q ss_pred eeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCC---CCEEEEEcCCCeEEEEEcCCccccccccccccceeE
Q psy7058 3 LLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLD---SKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITS 79 (85)
Q Consensus 3 ~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~ 79 (85)
.+.+++-|.++++||+.+.+....+.. +..|.+-+++|- ..++++|..+-.|++.|+.++...-.+.+|.+.|.+
T Consensus 116 mFtssSFDhtlKVWDtnTlQ~a~~F~m--e~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SGs~sH~LsGHr~~vla 193 (397)
T KOG4283|consen 116 MFTSSSFDHTLKVWDTNTLQEAVDFKM--EGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASGSFSHTLSGHRDGVLA 193 (397)
T ss_pred eeecccccceEEEeecccceeeEEeec--CceeehhhcChhhhcceEEEEecCCCcEEEEeccCCcceeeeccccCceEE
Confidence 467889999999999999988887774 556888888883 456778888999999999999999999999999999
Q ss_pred EEEeCC
Q psy7058 80 LAFCDF 85 (85)
Q Consensus 80 ~~~~~~ 85 (85)
+.|+|.
T Consensus 194 V~Wsp~ 199 (397)
T KOG4283|consen 194 VEWSPS 199 (397)
T ss_pred EEeccC
Confidence 999983
No 122
>KOG0649|consensus
Probab=99.39 E-value=6.6e-12 Score=63.85 Aligned_cols=68 Identities=18% Similarity=0.217 Sum_probs=58.9
Q ss_pred eeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCcccccccc
Q psy7058 3 LLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYS 71 (85)
Q Consensus 3 ~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 71 (85)
.++.++-|+.++-||+.+++..+.+++ |...+.++........+++|++||++|+||.++++....+.
T Consensus 128 Si~~AgGD~~~y~~dlE~G~i~r~~rG-HtDYvH~vv~R~~~~qilsG~EDGtvRvWd~kt~k~v~~ie 195 (325)
T KOG0649|consen 128 SILFAGGDGVIYQVDLEDGRIQREYRG-HTDYVHSVVGRNANGQILSGAEDGTVRVWDTKTQKHVSMIE 195 (325)
T ss_pred cEEEecCCeEEEEEEecCCEEEEEEcC-CcceeeeeeecccCcceeecCCCccEEEEeccccceeEEec
Confidence 456667899999999999999999998 99999999875566678899999999999999998776654
No 123
>KOG0639|consensus
Probab=99.39 E-value=1.5e-12 Score=71.60 Aligned_cols=84 Identities=15% Similarity=0.307 Sum_probs=68.7
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeecc-CCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeE
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTA-NQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITS 79 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~ 79 (85)
|+.|++|+...++.+||+....+.-..... .......++.+||.+.+++++.||.|.|||+.+...++.|++|.+.+.|
T Consensus 477 grtLivGGeastlsiWDLAapTprikaeltssapaCyALa~spDakvcFsccsdGnI~vwDLhnq~~VrqfqGhtDGasc 556 (705)
T KOG0639|consen 477 GRTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDAKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASC 556 (705)
T ss_pred CceEEeccccceeeeeeccCCCcchhhhcCCcchhhhhhhcCCccceeeeeccCCcEEEEEcccceeeecccCCCCCcee
Confidence 567899999999999999866554332221 1233566888999999999999999999999999999999999999999
Q ss_pred EEEeC
Q psy7058 80 LAFCD 84 (85)
Q Consensus 80 ~~~~~ 84 (85)
+..++
T Consensus 557 Idis~ 561 (705)
T KOG0639|consen 557 IDISK 561 (705)
T ss_pred EEecC
Confidence 98775
No 124
>KOG0299|consensus
Probab=99.36 E-value=1e-11 Score=67.24 Aligned_cols=82 Identities=26% Similarity=0.349 Sum_probs=69.1
Q ss_pred ceeEEeeCCCcEEEeeCCCceee-eee---------------e-ccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCc
Q psy7058 2 GLLATTSADQTARIWNTEDFSLV-REL---------------G-TANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETG 64 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~-~~~---------------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 64 (85)
.++++++.+++|.-|++.+++.. ..+ . ..|...+.++++++|++++++++.|..+.||+..+.
T Consensus 155 ~~~fsask~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~keil~~avS~Dgkylatgg~d~~v~Iw~~~t~ 234 (479)
T KOG0299|consen 155 KRVFSASKDGTILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHVKEILTLAVSSDGKYLATGGRDRHVQIWDCDTL 234 (479)
T ss_pred cceeecCCCcceeeeehhcCcccccccccchhhhhccCCCCcccccccceeEEEEEcCCCcEEEecCCCceEEEecCccc
Confidence 46789999999999999877633 111 0 125567899999999999999999999999999999
Q ss_pred cccccccccccceeEEEEe
Q psy7058 65 EVDKEYSGHQKAITSLAFC 83 (85)
Q Consensus 65 ~~~~~~~~~~~~v~~~~~~ 83 (85)
+.+..+.+|.+.|.+++|-
T Consensus 235 ehv~~~~ghr~~V~~L~fr 253 (479)
T KOG0299|consen 235 EHVKVFKGHRGAVSSLAFR 253 (479)
T ss_pred chhhcccccccceeeeeee
Confidence 9999999999999998874
No 125
>KOG0640|consensus
Probab=99.36 E-value=1.9e-11 Score=64.12 Aligned_cols=84 Identities=15% Similarity=0.303 Sum_probs=69.8
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeec--cCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCcccccccc-cc-ccc
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGT--ANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYS-GH-QKA 76 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~-~~~ 76 (85)
|++|+.|.....+++||+.+-++...-.. +|...|+++.+++.+++.++++.||.|++||-.+++++.++. .| ...
T Consensus 228 GefllvgTdHp~~rlYdv~T~QcfvsanPd~qht~ai~~V~Ys~t~~lYvTaSkDG~IklwDGVS~rCv~t~~~AH~gse 307 (430)
T KOG0640|consen 228 GEFLLVGTDHPTLRLYDVNTYQCFVSANPDDQHTGAITQVRYSSTGSLYVTASKDGAIKLWDGVSNRCVRTIGNAHGGSE 307 (430)
T ss_pred CceEEEecCCCceeEEeccceeEeeecCcccccccceeEEEecCCccEEEEeccCCcEEeeccccHHHHHHHHhhcCCce
Confidence 67899999999999999999887655433 467889999999999999999999999999999999988876 33 346
Q ss_pred eeEEEEeC
Q psy7058 77 ITSLAFCD 84 (85)
Q Consensus 77 v~~~~~~~ 84 (85)
|.+..|+.
T Consensus 308 vcSa~Ftk 315 (430)
T KOG0640|consen 308 VCSAVFTK 315 (430)
T ss_pred eeeEEEcc
Confidence 66666643
No 126
>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....
Probab=99.36 E-value=1.7e-11 Score=46.16 Aligned_cols=38 Identities=32% Similarity=0.565 Sum_probs=34.3
Q ss_pred eeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEE
Q psy7058 22 SLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWN 60 (85)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 60 (85)
++...+.. |...|++++|+|++..+++++.|+.|++||
T Consensus 2 ~~~~~~~~-h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 2 KCVRTFRG-HSSSINSIAWSPDGNFLASGSSDGTIRVWD 39 (39)
T ss_dssp EEEEEEES-SSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred eEEEEEcC-CCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence 55667776 888999999999999999999999999997
No 127
>KOG0302|consensus
Probab=99.36 E-value=7e-12 Score=66.72 Aligned_cols=59 Identities=19% Similarity=0.409 Sum_probs=51.0
Q ss_pred eeEEeeCCCcEEEeeCCCc---eeeeeeeccCCCcEEEEEecC-CCCEEEEEcCCCeEEEEEcC
Q psy7058 3 LLATTSADQTARIWNTEDF---SLVRELGTANQRWVWDAAFTL-DSKFLLTASSDGVARLWNIE 62 (85)
Q Consensus 3 ~l~~~~~~~~i~~~d~~~~---~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~ 62 (85)
+|++|+.||.+++||++.. +++..+.. |..+|+++.|+| +...+++++.|..|.+||+.
T Consensus 316 lLasG~DdGt~~iwDLR~~~~~~pVA~fk~-Hk~pItsieW~p~e~s~iaasg~D~QitiWDls 378 (440)
T KOG0302|consen 316 LLASGGDDGTLSIWDLRQFKSGQPVATFKY-HKAPITSIEWHPHEDSVIAASGEDNQITIWDLS 378 (440)
T ss_pred eeeecCCCceEEEEEhhhccCCCcceeEEe-ccCCeeEEEeccccCceEEeccCCCcEEEEEee
Confidence 6899999999999999854 56667766 889999999999 56778888999999999984
No 128
>KOG0303|consensus
Probab=99.35 E-value=6.1e-12 Score=67.32 Aligned_cols=81 Identities=28% Similarity=0.421 Sum_probs=68.5
Q ss_pred ceeEEeeCCCcEEEeeCCCc-------eeeeeeeccCCCcEEEEEecCCC-CEEEEEcCCCeEEEEEcCCcccccccccc
Q psy7058 2 GLLATTSADQTARIWNTEDF-------SLVRELGTANQRWVWDAAFTLDS-KFLLTASSDGVARLWNIETGEVDKEYSGH 73 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~-------~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 73 (85)
+.+|+|+.|.++.+|++... +++..+.+ |...+-.+.|+|.. +.+++++.|..|.+|++.++..+.++. |
T Consensus 95 ~vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~g-H~rrVg~V~wHPtA~NVLlsag~Dn~v~iWnv~tgeali~l~-h 172 (472)
T KOG0303|consen 95 CVIASGSEDTKVMVWQIPENGLTRDLTEPVVELYG-HQRRVGLVQWHPTAPNVLLSAGSDNTVSIWNVGTGEALITLD-H 172 (472)
T ss_pred ceeecCCCCceEEEEECCCcccccCcccceEEEee-cceeEEEEeecccchhhHhhccCCceEEEEeccCCceeeecC-C
Confidence 45899999999999999754 33445555 88889999999964 668899999999999999999998888 9
Q ss_pred ccceeEEEEeC
Q psy7058 74 QKAITSLAFCD 84 (85)
Q Consensus 74 ~~~v~~~~~~~ 84 (85)
.+.|.+++||-
T Consensus 173 pd~i~S~sfn~ 183 (472)
T KOG0303|consen 173 PDMVYSMSFNR 183 (472)
T ss_pred CCeEEEEEecc
Confidence 99999999974
No 129
>KOG2055|consensus
Probab=99.35 E-value=2.5e-11 Score=65.93 Aligned_cols=85 Identities=19% Similarity=0.237 Sum_probs=67.6
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCC------ccccccccccc
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIET------GEVDKEYSGHQ 74 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~------~~~~~~~~~~~ 74 (85)
|+.|++++.+|.|.+||++...+..++.....-.-++++.++++.++++|+..|.|.|||..+ .+++..+.--.
T Consensus 356 sk~l~~~~~~GeV~v~nl~~~~~~~rf~D~G~v~gts~~~S~ng~ylA~GS~~GiVNIYd~~s~~~s~~PkPik~~dNLt 435 (514)
T KOG2055|consen 356 SKELLASGGTGEVYVWNLRQNSCLHRFVDDGSVHGTSLCISLNGSYLATGSDSGIVNIYDGNSCFASTNPKPIKTVDNLT 435 (514)
T ss_pred CcEEEEEcCCceEEEEecCCcceEEEEeecCccceeeeeecCCCceEEeccCcceEEEeccchhhccCCCCchhhhhhhh
Confidence 356788888899999999998888887753333357788889999999999999999999653 35666666566
Q ss_pred cceeEEEEeCC
Q psy7058 75 KAITSLAFCDF 85 (85)
Q Consensus 75 ~~v~~~~~~~~ 85 (85)
..|++++|||.
T Consensus 436 t~Itsl~Fn~d 446 (514)
T KOG2055|consen 436 TAITSLQFNHD 446 (514)
T ss_pred eeeeeeeeCcc
Confidence 78899999873
No 130
>KOG2096|consensus
Probab=99.35 E-value=1.3e-11 Score=64.81 Aligned_cols=82 Identities=24% Similarity=0.407 Sum_probs=68.1
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcC---Cc-----ccccccccc
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIE---TG-----EVDKEYSGH 73 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~---~~-----~~~~~~~~~ 73 (85)
.++.+++.|..|.+|+++ |+.+..+.. ........+++|+|+++++++-..-+++|.+- .+ ....++.+|
T Consensus 200 k~imsas~dt~i~lw~lk-Gq~L~~idt-nq~~n~~aavSP~GRFia~~gFTpDVkVwE~~f~kdG~fqev~rvf~LkGH 277 (420)
T KOG2096|consen 200 KYIMSASLDTKICLWDLK-GQLLQSIDT-NQSSNYDAAVSPDGRFIAVSGFTPDVKVWEPIFTKDGTFQEVKRVFSLKGH 277 (420)
T ss_pred eEEEEecCCCcEEEEecC-Cceeeeecc-ccccccceeeCCCCcEEEEecCCCCceEEEEEeccCcchhhhhhhheeccc
Confidence 578999999999999999 888888776 44446678899999999999999999999863 22 345577899
Q ss_pred ccceeEEEEeCC
Q psy7058 74 QKAITSLAFCDF 85 (85)
Q Consensus 74 ~~~v~~~~~~~~ 85 (85)
...|...+|||.
T Consensus 278 ~saV~~~aFsn~ 289 (420)
T KOG2096|consen 278 QSAVLAAAFSNS 289 (420)
T ss_pred hhheeeeeeCCC
Confidence 999999999874
No 131
>KOG4283|consensus
Probab=99.35 E-value=3e-11 Score=62.94 Aligned_cols=80 Identities=25% Similarity=0.403 Sum_probs=64.8
Q ss_pred eeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCE-EEEEcCCCeEEEEEcCCc-ccccc-----------
Q psy7058 3 LLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKF-LLTASSDGVARLWNIETG-EVDKE----------- 69 (85)
Q Consensus 3 ~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~-~~~~~----------- 69 (85)
++|+|.++-.+++-|+.++.....+.+ |...|..+.|+|...+ +++++.|+.+++||++.. .++..
T Consensus 160 LiA~gtr~~~VrLCDi~SGs~sH~LsG-Hr~~vlaV~Wsp~~e~vLatgsaDg~irlWDiRrasgcf~~lD~hn~k~~p~ 238 (397)
T KOG4283|consen 160 LIAAGTRDVQVRLCDIASGSFSHTLSG-HRDGVLAVEWSPSSEWVLATGSADGAIRLWDIRRASGCFRVLDQHNTKRPPI 238 (397)
T ss_pred EEEEecCCCcEEEEeccCCcceeeecc-ccCceEEEEeccCceeEEEecCCCceEEEEEeecccceeEEeecccCccCcc
Confidence 578888999999999999999999988 8889999999997766 678999999999999754 22222
Q ss_pred ---ccccccceeEEEEe
Q psy7058 70 ---YSGHQKAITSLAFC 83 (85)
Q Consensus 70 ---~~~~~~~v~~~~~~ 83 (85)
-..|.+.++.++|+
T Consensus 239 ~~~n~ah~gkvngla~t 255 (397)
T KOG4283|consen 239 LKTNTAHYGKVNGLAWT 255 (397)
T ss_pred ccccccccceeeeeeec
Confidence 22466777777775
No 132
>KOG2111|consensus
Probab=99.34 E-value=3.1e-11 Score=63.02 Aligned_cols=79 Identities=18% Similarity=0.208 Sum_probs=64.5
Q ss_pred EeeCCCcEEEeeCCCcee--eeeeeccCCCcEEEEEecCCCCEEEEEcCCCe-EEEEEcCCcccccccc--ccccceeEE
Q psy7058 6 TTSADQTARIWNTEDFSL--VRELGTANQRWVWDAAFTLDSKFLLTASSDGV-ARLWNIETGEVDKEYS--GHQKAITSL 80 (85)
Q Consensus 6 ~~~~~~~i~~~d~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~~~~~--~~~~~v~~~ 80 (85)
.|..-|.+.+-|+...+. +..+.+ |...|.+++++.+|..+|+++..|+ |||||..++..+.+++ .....|+++
T Consensus 154 Pg~k~GqvQi~dL~~~~~~~p~~I~A-H~s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~~g~~l~E~RRG~d~A~iy~i 232 (346)
T KOG2111|consen 154 PGFKTGQVQIVDLASTKPNAPSIINA-HDSDIACVALNLQGTLVATASTKGTLIRIFDTEDGTLLQELRRGVDRADIYCI 232 (346)
T ss_pred CCCccceEEEEEhhhcCcCCceEEEc-ccCceeEEEEcCCccEEEEeccCcEEEEEEEcCCCcEeeeeecCCchheEEEE
Confidence 445567888888875544 344555 8889999999999999999999985 8999999999998887 345789999
Q ss_pred EEeCC
Q psy7058 81 AFCDF 85 (85)
Q Consensus 81 ~~~~~ 85 (85)
+|||+
T Consensus 233 aFSp~ 237 (346)
T KOG2111|consen 233 AFSPN 237 (346)
T ss_pred EeCCC
Confidence 99985
No 133
>KOG2111|consensus
Probab=99.34 E-value=3.9e-11 Score=62.69 Aligned_cols=64 Identities=30% Similarity=0.453 Sum_probs=56.1
Q ss_pred CceeEEeeCCCc-EEEeeCCCceeeeeeecc-CCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCc
Q psy7058 1 MGLLATTSADQT-ARIWNTEDFSLVRELGTA-NQRWVWDAAFTLDSKFLLTASSDGVARLWNIETG 64 (85)
Q Consensus 1 g~~l~~~~~~~~-i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 64 (85)
|.++|+++..|+ |++||+.+++.+..++.+ ....|.+++|+|+..+++..++.|++.||.++..
T Consensus 193 Gt~vATaStkGTLIRIFdt~~g~~l~E~RRG~d~A~iy~iaFSp~~s~LavsSdKgTlHiF~l~~~ 258 (346)
T KOG2111|consen 193 GTLVATASTKGTLIRIFDTEDGTLLQELRRGVDRADIYCIAFSPNSSWLAVSSDKGTLHIFSLRDT 258 (346)
T ss_pred ccEEEEeccCcEEEEEEEcCCCcEeeeeecCCchheEEEEEeCCCccEEEEEcCCCeEEEEEeecC
Confidence 578999998886 789999999999888764 3467999999999999999999999999998754
No 134
>KOG1332|consensus
Probab=99.33 E-value=1.2e-11 Score=62.86 Aligned_cols=84 Identities=23% Similarity=0.292 Sum_probs=65.2
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeee-ccCCCcEEEEEecCC--CCEEEEEcCCCeEEEEEcCCc---cccccccccc
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELG-TANQRWVWDAAFTLD--SKFLLTASSDGVARLWNIETG---EVDKEYSGHQ 74 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~-~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~~~~~~~---~~~~~~~~~~ 74 (85)
|+.|++++.|+.+.+|.-.++.-..... ..|...+++++|.|. |-.|+.+++||.|.+.+.+.. ...+....|.
T Consensus 70 G~iLAScsYDgkVIiWke~~g~w~k~~e~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~g~w~t~ki~~aH~ 149 (299)
T KOG1332|consen 70 GTILASCSYDGKVIIWKEENGRWTKAYEHAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSSGGWTTSKIVFAHE 149 (299)
T ss_pred CcEeeEeecCceEEEEecCCCchhhhhhhhhhcccceeecccccccceEEEEeeCCCcEEEEEEcCCCCccchhhhhccc
Confidence 6789999999999999987763322211 237788999999995 567889999999999998754 2233455789
Q ss_pred cceeEEEEeC
Q psy7058 75 KAITSLAFCD 84 (85)
Q Consensus 75 ~~v~~~~~~~ 84 (85)
-.|++++|.|
T Consensus 150 ~GvnsVswap 159 (299)
T KOG1332|consen 150 IGVNSVSWAP 159 (299)
T ss_pred cccceeeecC
Confidence 9999999987
No 135
>KOG1445|consensus
Probab=99.33 E-value=1.6e-12 Score=73.24 Aligned_cols=63 Identities=24% Similarity=0.416 Sum_probs=57.5
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCcc
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGE 65 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 65 (85)
+.|++++.|-+|++||+.+++...++.+ |...|..++|+|+|+.+++.+.|+++++|+.++..
T Consensus 691 dvLa~asyd~Ti~lWDl~~~~~~~~l~g-HtdqIf~~AWSpdGr~~AtVcKDg~~rVy~Prs~e 753 (1012)
T KOG1445|consen 691 DVLAVASYDSTIELWDLANAKLYSRLVG-HTDQIFGIAWSPDGRRIATVCKDGTLRVYEPRSRE 753 (1012)
T ss_pred hHhhhhhccceeeeeehhhhhhhheecc-CcCceeEEEECCCCcceeeeecCceEEEeCCCCCC
Confidence 3578999999999999999998888887 88999999999999999999999999999987653
No 136
>KOG0308|consensus
Probab=99.33 E-value=1.8e-11 Score=68.79 Aligned_cols=83 Identities=18% Similarity=0.365 Sum_probs=69.4
Q ss_pred ceeEEeeCCCcEEEeeCCCcee--eeee--------eccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCcccccccc
Q psy7058 2 GLLATTSADQTARIWNTEDFSL--VREL--------GTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYS 71 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~--~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 71 (85)
.++++|+-|+.|.+||+.++.. +.+. ..+....+.+++.++.|..+++|+..+.+++||.++.+.+..++
T Consensus 131 ~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~siYSLA~N~t~t~ivsGgtek~lr~wDprt~~kimkLr 210 (735)
T KOG0308|consen 131 ELVASGGLDRKIFLWDINTGTATLVASFNNVTVNSLGSGPKDSIYSLAMNQTGTIIVSGGTEKDLRLWDPRTCKKIMKLR 210 (735)
T ss_pred eeEEecCCCccEEEEEccCcchhhhhhccccccccCCCCCccceeeeecCCcceEEEecCcccceEEeccccccceeeee
Confidence 4689999999999999997733 2222 11245678999999999999999999999999999999999999
Q ss_pred ccccceeEEEEeC
Q psy7058 72 GHQKAITSLAFCD 84 (85)
Q Consensus 72 ~~~~~v~~~~~~~ 84 (85)
+|.+.|+.+..++
T Consensus 211 GHTdNVr~ll~~d 223 (735)
T KOG0308|consen 211 GHTDNVRVLLVND 223 (735)
T ss_pred ccccceEEEEEcC
Confidence 9999999887664
No 137
>KOG2445|consensus
Probab=99.32 E-value=8.3e-11 Score=61.42 Aligned_cols=83 Identities=19% Similarity=0.385 Sum_probs=64.7
Q ss_pred CceeEEeeCCCcEEEeeCCC----ceeeeeeeccCCCcEEEEEecCC--CCEEEEEcCCCeEEEEEcCCc---------c
Q psy7058 1 MGLLATTSADQTARIWNTED----FSLVRELGTANQRWVWDAAFTLD--SKFLLTASSDGVARLWNIETG---------E 65 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~----~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~~~~~~~---------~ 65 (85)
|+++++|+.|+++++||... .......+. |.+.|..+.|.+. |+.+++++.|+++.||.-... .
T Consensus 25 GRRmAtCSsDq~vkI~d~~~~s~~W~~Ts~Wra-h~~Si~rV~WAhPEfGqvvA~cS~Drtv~iWEE~~~~~~~~~~~Wv 103 (361)
T KOG2445|consen 25 GRRMATCSSDQTVKIWDSTSDSGTWSCTSSWRA-HDGSIWRVVWAHPEFGQVVATCSYDRTVSIWEEQEKSEEAHGRRWV 103 (361)
T ss_pred CceeeeccCCCcEEEEeccCCCCceEEeeeEEe-cCCcEEEEEecCccccceEEEEecCCceeeeeecccccccccceeE
Confidence 68899999999999999653 344555565 8888999999773 899999999999999986321 1
Q ss_pred ccccccccccceeEEEEeC
Q psy7058 66 VDKEYSGHQKAITSLAFCD 84 (85)
Q Consensus 66 ~~~~~~~~~~~v~~~~~~~ 84 (85)
...++......|++++|.|
T Consensus 104 ~~ttl~DsrssV~DV~FaP 122 (361)
T KOG2445|consen 104 RRTTLVDSRSSVTDVKFAP 122 (361)
T ss_pred EEEEeecCCcceeEEEecc
Confidence 2334555678899999987
No 138
>KOG1408|consensus
Probab=99.32 E-value=1.8e-11 Score=69.88 Aligned_cols=80 Identities=19% Similarity=0.261 Sum_probs=64.3
Q ss_pred eEEeeCCCcEEEeeCCCceeeeeee---------------------------c---------cCCCcEEEEEecCCCCEE
Q psy7058 4 LATTSADQTARIWNTEDFSLVRELG---------------------------T---------ANQRWVWDAAFTLDSKFL 47 (85)
Q Consensus 4 l~~~~~~~~i~~~d~~~~~~~~~~~---------------------------~---------~~~~~~~~~~~~~~~~~~ 47 (85)
+.+++.|++|++||+..+..-..+. . .....+.+++++|+|+++
T Consensus 395 F~TCSsD~TIRlW~l~~ctnn~vyrRNils~~l~ki~y~d~~~q~~~d~~~~~fdka~~s~~d~r~G~R~~~vSp~gqhL 474 (1080)
T KOG1408|consen 395 FTTCSSDGTIRLWDLAFCTNNQVYRRNILSANLSKIPYEDSTQQIMHDASAGIFDKALVSTCDSRFGFRALAVSPDGQHL 474 (1080)
T ss_pred eeEecCCCcEEEeecccccccceeecccchhhhhcCccccCchhhhhhccCCcccccchhhcCcccceEEEEECCCccee
Confidence 6899999999999987521111100 0 012347899999999999
Q ss_pred EEEcCCCeEEEEEcCCccccccccccccceeEEEEe
Q psy7058 48 LTASSDGVARLWNIETGEVDKEYSGHQKAITSLAFC 83 (85)
Q Consensus 48 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~ 83 (85)
++|+.-|.+++|++.+.+....+..|+..|.|+.|+
T Consensus 475 AsGDr~GnlrVy~Lq~l~~~~~~eAHesEilcLeyS 510 (1080)
T KOG1408|consen 475 ASGDRGGNLRVYDLQELEYTCFMEAHESEILCLEYS 510 (1080)
T ss_pred cccCccCceEEEEehhhhhhhheecccceeEEEeec
Confidence 999999999999999999888999999999999986
No 139
>KOG1188|consensus
Probab=99.31 E-value=2.8e-11 Score=63.71 Aligned_cols=84 Identities=15% Similarity=0.276 Sum_probs=63.1
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeecc-CC-CcEEEEEecCCCCEEEEEc----CCCeEEEEEcCCccc-cccc-ccc
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTA-NQ-RWVWDAAFTLDSKFLLTAS----SDGVARLWNIETGEV-DKEY-SGH 73 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~----~~~~i~~~~~~~~~~-~~~~-~~~ 73 (85)
..+.+++.||.|++||++......++... ++ .+..+++.+-.+..+++|. .+-.+.+||+++.+. +..+ ..|
T Consensus 85 h~v~s~ssDG~Vr~wD~Rs~~e~a~~~~~~~~~~~f~~ld~nck~~ii~~GtE~~~s~A~v~lwDvR~~qq~l~~~~eSH 164 (376)
T KOG1188|consen 85 HGVISCSSDGTVRLWDIRSQAESARISWTQQSGTPFICLDLNCKKNIIACGTELTRSDASVVLWDVRSEQQLLRQLNESH 164 (376)
T ss_pred CeeEEeccCCeEEEEEeecchhhhheeccCCCCCcceEeeccCcCCeEEeccccccCceEEEEEEeccccchhhhhhhhc
Confidence 35789999999999999987655544432 32 4567777766777887775 356899999998765 5544 479
Q ss_pred ccceeEEEEeCC
Q psy7058 74 QKAITSLAFCDF 85 (85)
Q Consensus 74 ~~~v~~~~~~~~ 85 (85)
.+.|++++|+|.
T Consensus 165 ~DDVT~lrFHP~ 176 (376)
T KOG1188|consen 165 NDDVTQLRFHPS 176 (376)
T ss_pred cCcceeEEecCC
Confidence 999999999985
No 140
>KOG0973|consensus
Probab=99.31 E-value=2.1e-11 Score=71.06 Aligned_cols=84 Identities=21% Similarity=0.368 Sum_probs=66.8
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCcccccccccc------c
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGH------Q 74 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~------~ 74 (85)
+.++++++.|+.|.+|+..+.+....+.+ |...+..+.|.|-|+++++-++|++|++|++.+-.....+.++ .
T Consensus 141 ~~~lvS~s~DnsViiwn~~tF~~~~vl~~-H~s~VKGvs~DP~Gky~ASqsdDrtikvwrt~dw~i~k~It~pf~~~~~~ 219 (942)
T KOG0973|consen 141 DSLLVSVSLDNSVIIWNAKTFELLKVLRG-HQSLVKGVSWDPIGKYFASQSDDRTLKVWRTSDWGIEKSITKPFEESPLT 219 (942)
T ss_pred ccEEEEecccceEEEEccccceeeeeeec-ccccccceEECCccCeeeeecCCceEEEEEcccceeeEeeccchhhCCCc
Confidence 35799999999999999999988888887 8889999999999999999999999999997654333333222 2
Q ss_pred cceeEEEEeCC
Q psy7058 75 KAITSLAFCDF 85 (85)
Q Consensus 75 ~~v~~~~~~~~ 85 (85)
.-.+-++|||.
T Consensus 220 T~f~RlSWSPD 230 (942)
T KOG0973|consen 220 TFFLRLSWSPD 230 (942)
T ss_pred ceeeecccCCC
Confidence 23455667763
No 141
>KOG1009|consensus
Probab=99.31 E-value=1.5e-11 Score=65.84 Aligned_cols=83 Identities=23% Similarity=0.452 Sum_probs=69.7
Q ss_pred CceeEEeeCCCcEEEeeCC--------C--------ceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCc
Q psy7058 1 MGLLATTSADQTARIWNTE--------D--------FSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETG 64 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~--------~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 64 (85)
|+.|++|+.++.+.+|... + ......+.+ |...+..++|++++.++++++-|..+++||+..+
T Consensus 77 gelLASg~D~g~v~lWk~~~~~~~~~d~e~~~~ke~w~v~k~lr~-h~~diydL~Ws~d~~~l~s~s~dns~~l~Dv~~G 155 (434)
T KOG1009|consen 77 GELLASGGDGGEVFLWKQGDVRIFDADTEADLNKEKWVVKKVLRG-HRDDIYDLAWSPDSNFLVSGSVDNSVRLWDVHAG 155 (434)
T ss_pred cCeeeecCCCceEEEEEecCcCCccccchhhhCccceEEEEEecc-cccchhhhhccCCCceeeeeeccceEEEEEeccc
Confidence 5789999999999999765 2 111222333 6677899999999999999999999999999999
Q ss_pred cccccccccccceeEEEEeC
Q psy7058 65 EVDKEYSGHQKAITSLAFCD 84 (85)
Q Consensus 65 ~~~~~~~~~~~~v~~~~~~~ 84 (85)
+....+..|...+..++|.|
T Consensus 156 ~l~~~~~dh~~yvqgvawDp 175 (434)
T KOG1009|consen 156 QLLAILDDHEHYVQGVAWDP 175 (434)
T ss_pred eeEeeccccccccceeecch
Confidence 99999999999999999876
No 142
>KOG4378|consensus
Probab=99.31 E-value=4.9e-11 Score=65.74 Aligned_cols=80 Identities=19% Similarity=0.252 Sum_probs=69.7
Q ss_pred eeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCcc-ccccccccccceeEEE
Q psy7058 3 LLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGE-VDKEYSGHQKAITSLA 81 (85)
Q Consensus 3 ~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~v~~~~ 81 (85)
++++.+.|..|.+||.+......++. +..++..++|.++|.+++.|...|.|..||++..+ ++..+..|...|.+++
T Consensus 223 l~vsVG~Dkki~~yD~~s~~s~~~l~--y~~Plstvaf~~~G~~L~aG~s~G~~i~YD~R~~k~Pv~v~sah~~sVt~va 300 (673)
T KOG4378|consen 223 LLVSVGYDKKINIYDIRSQASTDRLT--YSHPLSTVAFSECGTYLCAGNSKGELIAYDMRSTKAPVAVRSAHDASVTRVA 300 (673)
T ss_pred eEEEecccceEEEeecccccccceee--ecCCcceeeecCCceEEEeecCCceEEEEecccCCCCceEeeecccceeEEE
Confidence 57899999999999999777766665 56679999999999999999999999999999764 5667788999999999
Q ss_pred EeC
Q psy7058 82 FCD 84 (85)
Q Consensus 82 ~~~ 84 (85)
|-|
T Consensus 301 fq~ 303 (673)
T KOG4378|consen 301 FQP 303 (673)
T ss_pred eee
Confidence 975
No 143
>KOG0640|consensus
Probab=99.30 E-value=7.5e-12 Score=65.55 Aligned_cols=72 Identities=35% Similarity=0.624 Sum_probs=63.0
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCC-CcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccc
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQ-RWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSG 72 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 72 (85)
|+++++++.||.|++||--+..++..+...|. ..|.+..|..+++++++.+.|..+++|.+.+++.+..+-+
T Consensus 273 ~~lYvTaSkDG~IklwDGVS~rCv~t~~~AH~gsevcSa~Ftkn~kyiLsSG~DS~vkLWEi~t~R~l~~YtG 345 (430)
T KOG0640|consen 273 GSLYVTASKDGAIKLWDGVSNRCVRTIGNAHGGSEVCSAVFTKNGKYILSSGKDSTVKLWEISTGRMLKEYTG 345 (430)
T ss_pred ccEEEEeccCCcEEeeccccHHHHHHHHhhcCCceeeeEEEccCCeEEeecCCcceeeeeeecCCceEEEEec
Confidence 56789999999999999999999888877654 5688899999999999999999999999999887776653
No 144
>KOG0307|consensus
Probab=99.30 E-value=3.5e-12 Score=74.61 Aligned_cols=85 Identities=20% Similarity=0.223 Sum_probs=68.2
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeec-cCCCcEEEEEecCC-CCEEEEEcCCCeEEEEEcCCcccccccccccc--c
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGT-ANQRWVWDAAFTLD-SKFLLTASSDGVARLWNIETGEVDKEYSGHQK--A 76 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~--~ 76 (85)
+++|++|+.+|.|.+||+.+.+....... .....|.+++|+.. .+.+++++.++...|||++..+++..+..+.. .
T Consensus 129 ~nlLASGa~~geI~iWDlnn~~tP~~~~~~~~~~eI~~lsWNrkvqhILAS~s~sg~~~iWDlr~~~pii~ls~~~~~~~ 208 (1049)
T KOG0307|consen 129 GNLLASGADDGEILIWDLNKPETPFTPGSQAPPSEIKCLSWNRKVSHILASGSPSGRAVIWDLRKKKPIIKLSDTPGRMH 208 (1049)
T ss_pred CceeeccCCCCcEEEeccCCcCCCCCCCCCCCcccceEeccchhhhHHhhccCCCCCceeccccCCCcccccccCCCccc
Confidence 36899999999999999998776666532 24567999999985 56688999999999999999888877775544 4
Q ss_pred eeEEEEeCC
Q psy7058 77 ITSLAFCDF 85 (85)
Q Consensus 77 v~~~~~~~~ 85 (85)
+..++|+|.
T Consensus 209 ~S~l~WhP~ 217 (1049)
T KOG0307|consen 209 CSVLAWHPD 217 (1049)
T ss_pred eeeeeeCCC
Confidence 678899884
No 145
>KOG0771|consensus
Probab=99.29 E-value=9.2e-12 Score=66.53 Aligned_cols=66 Identities=32% Similarity=0.444 Sum_probs=57.3
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccc
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDK 68 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 68 (85)
|..+++++.||.+++|++++.+....... +...|.++.|+|||+.+++.+.| ..++|+..++.++.
T Consensus 156 gs~latgg~dg~lRv~~~Ps~~t~l~e~~-~~~eV~DL~FS~dgk~lasig~d-~~~VW~~~~g~~~a 221 (398)
T KOG0771|consen 156 GSKLATGGTDGTLRVWEWPSMLTILEEIA-HHAEVKDLDFSPDGKFLASIGAD-SARVWSVNTGAALA 221 (398)
T ss_pred CCEeeeccccceEEEEecCcchhhhhhHh-hcCccccceeCCCCcEEEEecCC-ceEEEEeccCchhh
Confidence 46899999999999999988877766665 67789999999999999999999 99999999885443
No 146
>KOG1538|consensus
Probab=99.29 E-value=3.6e-11 Score=68.43 Aligned_cols=72 Identities=22% Similarity=0.366 Sum_probs=62.0
Q ss_pred CCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEEEEeC
Q psy7058 10 DQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSLAFCD 84 (85)
Q Consensus 10 ~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 84 (85)
+..+.+||...|.....+++ |...+.+++|+.+|..+++|+.|+.+.+|..+-.. +..+ .|.+.|.||.|+|
T Consensus 32 g~rlliyD~ndG~llqtLKg-HKDtVycVAys~dGkrFASG~aDK~VI~W~~klEG-~LkY-SH~D~IQCMsFNP 103 (1081)
T KOG1538|consen 32 GSRLLVYDTSDGTLLQPLKG-HKDTVYCVAYAKDGKRFASGSADKSVIIWTSKLEG-ILKY-SHNDAIQCMSFNP 103 (1081)
T ss_pred CCEEEEEeCCCccccccccc-ccceEEEEEEccCCceeccCCCceeEEEecccccc-eeee-ccCCeeeEeecCc
Confidence 35699999999999999988 99999999999999999999999999999875322 2233 3899999999998
No 147
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=99.28 E-value=1.9e-10 Score=57.43 Aligned_cols=75 Identities=13% Similarity=0.256 Sum_probs=57.2
Q ss_pred EEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcC---CCeEEEEEcCCccccccccccccceeEEE
Q psy7058 5 ATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASS---DGVARLWNIETGEVDKEYSGHQKAITSLA 81 (85)
Q Consensus 5 ~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~i~~~~~~~~~~~~~~~~~~~~v~~~~ 81 (85)
+.|..+..+.+||++ ++.+..+. ...++.+.|+|+|+++++++. .|.+.+||+++.+.+.... | ..+..++
T Consensus 77 i~g~~~~~v~lyd~~-~~~i~~~~---~~~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~~~~i~~~~-~-~~~t~~~ 150 (194)
T PF08662_consen 77 IYGSMPAKVTLYDVK-GKKIFSFG---TQPRNTISWSPDGRFLVLAGFGNLNGDLEFWDVRKKKKISTFE-H-SDATDVE 150 (194)
T ss_pred EEccCCcccEEEcCc-ccEeEeec---CCCceEEEECCCCCEEEEEEccCCCcEEEEEECCCCEEeeccc-c-CcEEEEE
Confidence 345567789999997 55555554 345789999999999998764 4679999999888877765 3 3478899
Q ss_pred EeCC
Q psy7058 82 FCDF 85 (85)
Q Consensus 82 ~~~~ 85 (85)
|+|.
T Consensus 151 WsPd 154 (194)
T PF08662_consen 151 WSPD 154 (194)
T ss_pred EcCC
Confidence 9984
No 148
>KOG0288|consensus
Probab=99.27 E-value=2.3e-12 Score=69.00 Aligned_cols=81 Identities=28% Similarity=0.472 Sum_probs=70.3
Q ss_pred ceeEEeeCCCcEEEeeCCCce--eeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeE
Q psy7058 2 GLLATTSADQTARIWNTEDFS--LVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITS 79 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~ 79 (85)
..|++++.|..|++|++...+ ....+.+ ..+.++++.+.+++.++++.+.|+.+++|++.+.+...++.+|.+.|.+
T Consensus 188 dtlatgg~Dr~Ik~W~v~~~k~~~~~tLaG-s~g~it~~d~d~~~~~~iAas~d~~~r~Wnvd~~r~~~TLsGHtdkVt~ 266 (459)
T KOG0288|consen 188 DTLATGGSDRIIKLWNVLGEKSELISTLAG-SLGNITSIDFDSDNKHVIAASNDKNLRLWNVDSLRLRHTLSGHTDKVTA 266 (459)
T ss_pred chhhhcchhhhhhhhhcccchhhhhhhhhc-cCCCcceeeecCCCceEEeecCCCceeeeeccchhhhhhhcccccceee
Confidence 468899999999999998665 3444444 5677999999999999999999999999999999999999999999998
Q ss_pred EEEe
Q psy7058 80 LAFC 83 (85)
Q Consensus 80 ~~~~ 83 (85)
+.|.
T Consensus 267 ak~~ 270 (459)
T KOG0288|consen 267 AKFK 270 (459)
T ss_pred ehhh
Confidence 8764
No 149
>KOG0642|consensus
Probab=99.27 E-value=7e-11 Score=65.40 Aligned_cols=82 Identities=22% Similarity=0.366 Sum_probs=66.9
Q ss_pred ceeEEeeCCCcEEEeeCCC--------ceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCc---------
Q psy7058 2 GLLATTSADQTARIWNTED--------FSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETG--------- 64 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--------- 64 (85)
..|++++.|+.|++|++.. -+++.++.+ |.++|.|+++...+..+++|+.||+|+.|++...
T Consensus 307 p~lit~sed~~lk~WnLqk~~~s~~~~~epi~tfra-H~gPVl~v~v~~n~~~~ysgg~Dg~I~~w~~p~n~dp~ds~dp 385 (577)
T KOG0642|consen 307 PVLITASEDGTLKLWNLQKAKKSAEKDVEPILTFRA-HEGPVLCVVVPSNGEHCYSGGIDGTIRCWNLPPNQDPDDSYDP 385 (577)
T ss_pred CeEEEeccccchhhhhhcccCCccccceeeeEEEec-ccCceEEEEecCCceEEEeeccCceeeeeccCCCCCcccccCc
Confidence 3589999999999999932 245667777 9999999999999999999999999999976522
Q ss_pred -cccccccccccceeEEEEeC
Q psy7058 65 -EVDKEYSGHQKAITSLAFCD 84 (85)
Q Consensus 65 -~~~~~~~~~~~~v~~~~~~~ 84 (85)
.....+.+|.+.++.+++++
T Consensus 386 ~vl~~~l~Ghtdavw~l~~s~ 406 (577)
T KOG0642|consen 386 SVLSGTLLGHTDAVWLLALSS 406 (577)
T ss_pred chhccceeccccceeeeeecc
Confidence 12346778999999888875
No 150
>KOG1063|consensus
Probab=99.26 E-value=5e-11 Score=67.40 Aligned_cols=84 Identities=24% Similarity=0.351 Sum_probs=68.6
Q ss_pred CceeEEeeCCC-----cEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCcc----cccccc
Q psy7058 1 MGLLATTSADQ-----TARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGE----VDKEYS 71 (85)
Q Consensus 1 g~~l~~~~~~~-----~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~----~~~~~~ 71 (85)
|+++++++... .|++|++.+......+.. |.-.|+.+.|+||++++++.+.|+++.+|...... .....+
T Consensus 537 gnliASaCKS~~~ehAvI~lw~t~~W~~~~~L~~-HsLTVT~l~FSpdg~~LLsvsRDRt~sl~~~~~~~~~e~~fa~~k 615 (764)
T KOG1063|consen 537 GNLIASACKSSLKEHAVIRLWNTANWLQVQELEG-HSLTVTRLAFSPDGRYLLSVSRDRTVSLYEVQEDIKDEFRFACLK 615 (764)
T ss_pred CCEEeehhhhCCccceEEEEEeccchhhhheecc-cceEEEEEEECCCCcEEEEeecCceEEeeeeecccchhhhhcccc
Confidence 45677776554 388999999888887777 88899999999999999999999999999875442 222366
Q ss_pred ccccceeEEEEeCC
Q psy7058 72 GHQKAITSLAFCDF 85 (85)
Q Consensus 72 ~~~~~v~~~~~~~~ 85 (85)
.|...|.++.|+|.
T Consensus 616 ~HtRIIWdcsW~pd 629 (764)
T KOG1063|consen 616 AHTRIIWDCSWSPD 629 (764)
T ss_pred ccceEEEEcccCcc
Confidence 89999999999984
No 151
>KOG1272|consensus
Probab=99.22 E-value=2.4e-11 Score=66.19 Aligned_cols=67 Identities=12% Similarity=0.238 Sum_probs=59.2
Q ss_pred eEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCcccccccc
Q psy7058 4 LATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYS 71 (85)
Q Consensus 4 l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 71 (85)
+-+|...|++.+|.....+++..+.. |.+++.++++.++|.+.+|.+.|..++|||++.-..+.++.
T Consensus 266 ih~GhsnGtVSlWSP~skePLvKiLc-H~g~V~siAv~~~G~YMaTtG~Dr~~kIWDlR~~~ql~t~~ 332 (545)
T KOG1272|consen 266 IHLGHSNGTVSLWSPNSKEPLVKILC-HRGPVSSIAVDRGGRYMATTGLDRKVKIWDLRNFYQLHTYR 332 (545)
T ss_pred EEEcCCCceEEecCCCCcchHHHHHh-cCCCcceEEECCCCcEEeecccccceeEeeeccccccceee
Confidence 45788899999999998888888877 88999999999999999999999999999999776555544
No 152
>KOG0322|consensus
Probab=99.22 E-value=2.9e-11 Score=62.04 Aligned_cols=60 Identities=25% Similarity=0.356 Sum_probs=55.7
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEc
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNI 61 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 61 (85)
++.+|+++-|+.+++|+.++..+...+.. |...+++++|+|+...++.++.|..|.+|++
T Consensus 263 ~KIlATAGWD~RiRVyswrtl~pLAVLky-Hsagvn~vAfspd~~lmAaaskD~rISLWkL 322 (323)
T KOG0322|consen 263 GKILATAGWDHRIRVYSWRTLNPLAVLKY-HSAGVNAVAFSPDCELMAAASKDARISLWKL 322 (323)
T ss_pred CcEEeecccCCcEEEEEeccCCchhhhhh-hhcceeEEEeCCCCchhhhccCCceEEeeec
Confidence 35689999999999999999999988887 8888999999999999999999999999986
No 153
>KOG1274|consensus
Probab=99.22 E-value=3.3e-10 Score=65.76 Aligned_cols=81 Identities=21% Similarity=0.353 Sum_probs=65.1
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCC-CcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeE
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQ-RWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITS 79 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~ 79 (85)
|..++....|+.|++|+..+++....+...+. ..+..+.|+|.|.++++++.++.|.+||+.+... ......|.+
T Consensus 200 ~g~la~~~~d~~Vkvy~r~~we~~f~Lr~~~~ss~~~~~~wsPnG~YiAAs~~~g~I~vWnv~t~~~----~~~~~~Vc~ 275 (933)
T KOG1274|consen 200 GGTLAVPPVDNTVKVYSRKGWELQFKLRDKLSSSKFSDLQWSPNGKYIAASTLDGQILVWNVDTHER----HEFKRAVCC 275 (933)
T ss_pred CCeEEeeccCCeEEEEccCCceeheeecccccccceEEEEEcCCCcEEeeeccCCcEEEEecccchh----ccccceeEE
Confidence 34577778899999999999999988877533 3489999999999999999999999999987332 223467778
Q ss_pred EEEeCC
Q psy7058 80 LAFCDF 85 (85)
Q Consensus 80 ~~~~~~ 85 (85)
++|.|+
T Consensus 276 ~aw~p~ 281 (933)
T KOG1274|consen 276 EAWKPN 281 (933)
T ss_pred EecCCC
Confidence 887663
No 154
>KOG1446|consensus
Probab=99.22 E-value=6.4e-10 Score=57.99 Aligned_cols=83 Identities=24% Similarity=0.327 Sum_probs=70.3
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcC--CCeEEEEEcCCcccccccccccccee
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASS--DGVARLWNIETGEVDKEYSGHQKAIT 78 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~v~ 78 (85)
|..+++++.|..+++||..+++....+.. +.-.+..++|......+..++. |..|+..++.+.+.++.|.+|...|+
T Consensus 26 G~~litss~dDsl~LYd~~~g~~~~ti~s-kkyG~~~~~Fth~~~~~i~sStk~d~tIryLsl~dNkylRYF~GH~~~V~ 104 (311)
T KOG1446|consen 26 GLLLITSSEDDSLRLYDSLSGKQVKTINS-KKYGVDLACFTHHSNTVIHSSTKEDDTIRYLSLHDNKYLRYFPGHKKRVN 104 (311)
T ss_pred CCEEEEecCCCeEEEEEcCCCceeeEeec-ccccccEEEEecCCceEEEccCCCCCceEEEEeecCceEEEcCCCCceEE
Confidence 57889999999999999999999988876 3334777888776666665554 78999999999999999999999999
Q ss_pred EEEEeC
Q psy7058 79 SLAFCD 84 (85)
Q Consensus 79 ~~~~~~ 84 (85)
.++.+|
T Consensus 105 sL~~sP 110 (311)
T KOG1446|consen 105 SLSVSP 110 (311)
T ss_pred EEEecC
Confidence 999887
No 155
>KOG1274|consensus
Probab=99.21 E-value=4.1e-10 Score=65.39 Aligned_cols=84 Identities=24% Similarity=0.396 Sum_probs=70.4
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccc--------
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSG-------- 72 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-------- 72 (85)
|++++.|+.|-.|++-+..+......+.+ +..++.++.++|.+.++++.+-||.+++|++.++.....+..
T Consensus 108 g~~iaagsdD~~vK~~~~~D~s~~~~lrg-h~apVl~l~~~p~~~fLAvss~dG~v~iw~~~~~~~~~tl~~v~k~n~~~ 186 (933)
T KOG1274|consen 108 GKMIAAGSDDTAVKLLNLDDSSQEKVLRG-HDAPVLQLSYDPKGNFLAVSSCDGKVQIWDLQDGILSKTLTGVDKDNEFI 186 (933)
T ss_pred CcEEEeecCceeEEEEeccccchheeecc-cCCceeeeeEcCCCCEEEEEecCceEEEEEcccchhhhhcccCCcccccc
Confidence 57899999999999999988887777777 889999999999999999999999999999998876555432
Q ss_pred cccceeEEEEeCC
Q psy7058 73 HQKAITSLAFCDF 85 (85)
Q Consensus 73 ~~~~v~~~~~~~~ 85 (85)
....+..++|+|.
T Consensus 187 ~s~i~~~~aW~Pk 199 (933)
T KOG1274|consen 187 LSRICTRLAWHPK 199 (933)
T ss_pred ccceeeeeeecCC
Confidence 1345567888873
No 156
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=99.20 E-value=9.9e-10 Score=57.21 Aligned_cols=81 Identities=19% Similarity=0.234 Sum_probs=60.5
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEE-EEEcCCCeEEEEEcCCccccccccccccceeE
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFL-LTASSDGVARLWNIETGEVDKEYSGHQKAITS 79 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~ 79 (85)
+..+++++.|+.+++||..+++....+.. +. .+..+.|+|++..+ +++..++.+++||..+++....+..+.. +..
T Consensus 1 ~~~~~s~~~d~~v~~~d~~t~~~~~~~~~-~~-~~~~l~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~-~~~ 77 (300)
T TIGR03866 1 EKAYVSNEKDNTISVIDTATLEVTRTFPV-GQ-RPRGITLSKDGKLLYVCASDSDTIQVIDLATGEVIGTLPSGPD-PEL 77 (300)
T ss_pred CcEEEEecCCCEEEEEECCCCceEEEEEC-CC-CCCceEECCCCCEEEEEECCCCeEEEEECCCCcEEEeccCCCC-ccE
Confidence 45788999999999999998887777664 32 35679999999876 5667889999999988876655553322 345
Q ss_pred EEEeC
Q psy7058 80 LAFCD 84 (85)
Q Consensus 80 ~~~~~ 84 (85)
+.|+|
T Consensus 78 ~~~~~ 82 (300)
T TIGR03866 78 FALHP 82 (300)
T ss_pred EEECC
Confidence 56654
No 157
>KOG4378|consensus
Probab=99.18 E-value=1.7e-10 Score=63.70 Aligned_cols=81 Identities=15% Similarity=0.334 Sum_probs=65.7
Q ss_pred eeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecC-CCCEEEEEcCCCeEEEEEcCCccccccccccccceeEEE
Q psy7058 3 LLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTL-DSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSLA 81 (85)
Q Consensus 3 ~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~ 81 (85)
+|.+++.+|.+.+||+....+.......|..+...++|+| +..++++.+.|+.|.+||+...+....+. -..+...++
T Consensus 179 lL~~asd~G~VtlwDv~g~sp~~~~~~~HsAP~~gicfspsne~l~vsVG~Dkki~~yD~~s~~s~~~l~-y~~Plstva 257 (673)
T KOG4378|consen 179 LLSIASDKGAVTLWDVQGMSPIFHASEAHSAPCRGICFSPSNEALLVSVGYDKKINIYDIRSQASTDRLT-YSHPLSTVA 257 (673)
T ss_pred eeEeeccCCeEEEEeccCCCcccchhhhccCCcCcceecCCccceEEEecccceEEEeecccccccceee-ecCCcceee
Confidence 4678999999999999988888877777889999999999 56678899999999999998665544443 345667777
Q ss_pred EeC
Q psy7058 82 FCD 84 (85)
Q Consensus 82 ~~~ 84 (85)
|+|
T Consensus 258 f~~ 260 (673)
T KOG4378|consen 258 FSE 260 (673)
T ss_pred ecC
Confidence 765
No 158
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=99.18 E-value=1.3e-09 Score=56.82 Aligned_cols=77 Identities=17% Similarity=0.229 Sum_probs=59.3
Q ss_pred EEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEE-cCCCeEEEEEcCCccccccccccccceeEEEEe
Q psy7058 5 ATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTA-SSDGVARLWNIETGEVDKEYSGHQKAITSLAFC 83 (85)
Q Consensus 5 ~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~ 83 (85)
++.+.++.+.+||..+++....... ...+.++.|+|++..++++ ..++.|.+||+.+++.+..++.. ...+.++++
T Consensus 223 ~~~~~~~~i~v~d~~~~~~~~~~~~--~~~~~~~~~~~~g~~l~~~~~~~~~i~v~d~~~~~~~~~~~~~-~~~~~~~~~ 299 (300)
T TIGR03866 223 VALGPANRVAVVDAKTYEVLDYLLV--GQRVWQLAFTPDEKYLLTTNGVSNDVSVIDVAALKVIKSIKVG-RLPWGVVVR 299 (300)
T ss_pred EEcCCCCeEEEEECCCCcEEEEEEe--CCCcceEEECCCCCEEEEEcCCCCeEEEEECCCCcEEEEEEcc-cccceeEeC
Confidence 3344566799999988877655432 3458899999999998876 46899999999999988888754 555888887
Q ss_pred C
Q psy7058 84 D 84 (85)
Q Consensus 84 ~ 84 (85)
|
T Consensus 300 ~ 300 (300)
T TIGR03866 300 P 300 (300)
T ss_pred C
Confidence 5
No 159
>KOG1063|consensus
Probab=99.17 E-value=3.1e-10 Score=64.38 Aligned_cols=84 Identities=21% Similarity=0.309 Sum_probs=64.5
Q ss_pred CceeEEeeCCCcEEEeeCCCceee-ee--eeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCc--ccccc--cccc
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLV-RE--LGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETG--EVDKE--YSGH 73 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~~~--~~~~ 73 (85)
|++|++.++|+++.+|........ .. ....|...|++..|+|++.+++|++.|+.+.+|..... +.+.. ...+
T Consensus 584 g~~LLsvsRDRt~sl~~~~~~~~~e~~fa~~k~HtRIIWdcsW~pde~~FaTaSRDK~VkVW~~~~~~d~~i~~~a~~~~ 663 (764)
T KOG1063|consen 584 GRYLLSVSRDRTVSLYEVQEDIKDEFRFACLKAHTRIIWDCSWSPDEKYFATASRDKKVKVWEEPDLRDKYISRFACLKF 663 (764)
T ss_pred CcEEEEeecCceEEeeeeecccchhhhhccccccceEEEEcccCcccceeEEecCCceEEEEeccCchhhhhhhhchhcc
Confidence 578999999999999987543221 11 12237888999999999999999999999999998877 43333 2346
Q ss_pred ccceeEEEEeC
Q psy7058 74 QKAITSLAFCD 84 (85)
Q Consensus 74 ~~~v~~~~~~~ 84 (85)
..+|+.++|.|
T Consensus 664 ~~aVTAv~~~~ 674 (764)
T KOG1063|consen 664 SLAVTAVAYLP 674 (764)
T ss_pred CCceeeEEeec
Confidence 78888888865
No 160
>KOG1036|consensus
Probab=99.17 E-value=1.1e-09 Score=57.09 Aligned_cols=78 Identities=12% Similarity=0.212 Sum_probs=59.6
Q ss_pred eeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEEEE
Q psy7058 3 LLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSLAF 82 (85)
Q Consensus 3 ~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~~ 82 (85)
.+++|+.|+.|+++|+.+++.... . .|..++.++...+....+++|+.|++|++||.+.......+. ....|.++..
T Consensus 67 ~~~~G~~dg~vr~~Dln~~~~~~i-g-th~~~i~ci~~~~~~~~vIsgsWD~~ik~wD~R~~~~~~~~d-~~kkVy~~~v 143 (323)
T KOG1036|consen 67 TIVTGGLDGQVRRYDLNTGNEDQI-G-THDEGIRCIEYSYEVGCVISGSWDKTIKFWDPRNKVVVGTFD-QGKKVYCMDV 143 (323)
T ss_pred eEEEeccCceEEEEEecCCcceee-c-cCCCceEEEEeeccCCeEEEcccCccEEEEeccccccccccc-cCceEEEEec
Confidence 467888888888888877665443 2 277889999999988899999999999999999765555555 3347777654
Q ss_pred e
Q psy7058 83 C 83 (85)
Q Consensus 83 ~ 83 (85)
+
T Consensus 144 ~ 144 (323)
T KOG1036|consen 144 S 144 (323)
T ss_pred c
Confidence 3
No 161
>KOG0290|consensus
Probab=99.16 E-value=6.1e-10 Score=58.06 Aligned_cols=53 Identities=19% Similarity=0.276 Sum_probs=42.3
Q ss_pred CCCcEEEEEecC-CCCEEEEEcCCCeEEEEEcCCcc------ccccccccccceeEEEEeC
Q psy7058 31 NQRWVWDAAFTL-DSKFLLTASSDGVARLWNIETGE------VDKEYSGHQKAITSLAFCD 84 (85)
Q Consensus 31 ~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~------~~~~~~~~~~~v~~~~~~~ 84 (85)
|...|+.++|.| ..+.++++++|....+||+.+.- ++..+. .++.|+.+.|++
T Consensus 286 H~a~VNgIaWaPhS~~hictaGDD~qaliWDl~q~~~~~~~dPilay~-a~~EVNqi~Ws~ 345 (364)
T KOG0290|consen 286 HQASVNGIAWAPHSSSHICTAGDDCQALIWDLQQMPRENGEDPILAYT-AGGEVNQIQWSS 345 (364)
T ss_pred CcccccceEecCCCCceeeecCCcceEEEEecccccccCCCCchhhhh-ccceeeeeeecc
Confidence 667799999999 56789999999999999997542 333444 567899999985
No 162
>KOG1524|consensus
Probab=99.16 E-value=6.8e-10 Score=61.95 Aligned_cols=54 Identities=20% Similarity=0.292 Sum_probs=47.4
Q ss_pred CCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEEEEeCC
Q psy7058 31 NQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSLAFCDF 85 (85)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 85 (85)
|.+-|.++.|++....+++|++|...++||.. |..+..-..|+.+|++++|+|.
T Consensus 185 HDGiiL~~~W~~~s~lI~sgGED~kfKvWD~~-G~~Lf~S~~~ey~ITSva~npd 238 (737)
T KOG1524|consen 185 HDGLVLSLSWSTQSNIIASGGEDFRFKIWDAQ-GANLFTSAAEEYAITSVAFNPE 238 (737)
T ss_pred cCcEEEEeecCccccceeecCCceeEEeeccc-CcccccCChhccceeeeeeccc
Confidence 56678899999999999999999999999985 6667777779999999999984
No 163
>KOG0300|consensus
Probab=99.16 E-value=6.9e-10 Score=58.68 Aligned_cols=81 Identities=14% Similarity=0.309 Sum_probs=64.5
Q ss_pred ceeEEeeCCCcEEEeeCCCcee-eeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCcc----ccccccccccc
Q psy7058 2 GLLATTSADQTARIWNTEDFSL-VRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGE----VDKEYSGHQKA 76 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~----~~~~~~~~~~~ 76 (85)
..+++|+.|.++++||++++.. +..+. ...+++.+.++..+..++...++..|++||+...+ +...-++|..-
T Consensus 369 d~vVSgSDDrTvKvWdLrNMRsplATIR--tdS~~NRvavs~g~~iIAiPhDNRqvRlfDlnG~RlaRlPrtsRqgHrRM 446 (481)
T KOG0300|consen 369 DRVVSGSDDRTVKVWDLRNMRSPLATIR--TDSPANRVAVSKGHPIIAIPHDNRQVRLFDLNGNRLARLPRTSRQGHRRM 446 (481)
T ss_pred CceeecCCCceEEEeeeccccCcceeee--cCCccceeEeecCCceEEeccCCceEEEEecCCCccccCCccccccccee
Confidence 4688999999999999998754 45555 35669999999888899999999999999996443 22245588899
Q ss_pred eeEEEEeC
Q psy7058 77 ITSLAFCD 84 (85)
Q Consensus 77 v~~~~~~~ 84 (85)
|.|++|..
T Consensus 447 V~c~AW~e 454 (481)
T KOG0300|consen 447 VTCCAWLE 454 (481)
T ss_pred eeeeeccc
Confidence 99999864
No 164
>KOG1009|consensus
Probab=99.16 E-value=1.5e-10 Score=62.12 Aligned_cols=83 Identities=29% Similarity=0.380 Sum_probs=63.0
Q ss_pred ceeEEeeCCCcEEEeeCCCceee---------eeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcC--------C-
Q psy7058 2 GLLATTSADQTARIWNTEDFSLV---------RELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIE--------T- 63 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--------~- 63 (85)
+++++|+.|..|++|.+.....- ..+. .|...++.+.|+|+|..+++|++++.+.+|... .
T Consensus 27 ~~laT~G~D~~iriW~v~r~~~~~~~~~V~y~s~Ls-~H~~aVN~vRf~p~gelLASg~D~g~v~lWk~~~~~~~~~d~e 105 (434)
T KOG1009|consen 27 NKLATAGGDKDIRIWKVNRSEPGGGDMKVEYLSSLS-RHTRAVNVVRFSPDGELLASGGDGGEVFLWKQGDVRIFDADTE 105 (434)
T ss_pred cceecccCccceeeeeeeecCCCCCceeEEEeeccc-CCcceeEEEEEcCCcCeeeecCCCceEEEEEecCcCCccccch
Confidence 37899999999999988643221 1222 377889999999999999999999999999765 1
Q ss_pred -------ccccccccccccceeEEEEeCC
Q psy7058 64 -------GEVDKEYSGHQKAITSLAFCDF 85 (85)
Q Consensus 64 -------~~~~~~~~~~~~~v~~~~~~~~ 85 (85)
-.....+.+|...|+.++|+|.
T Consensus 106 ~~~~ke~w~v~k~lr~h~~diydL~Ws~d 134 (434)
T KOG1009|consen 106 ADLNKEKWVVKKVLRGHRDDIYDLAWSPD 134 (434)
T ss_pred hhhCccceEEEEEecccccchhhhhccCC
Confidence 0122345578889999999874
No 165
>KOG0301|consensus
Probab=99.15 E-value=1.3e-09 Score=61.91 Aligned_cols=75 Identities=19% Similarity=0.384 Sum_probs=60.1
Q ss_pred eeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEEE
Q psy7058 3 LLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSLA 81 (85)
Q Consensus 3 ~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~ 81 (85)
.++++++|+.|+.|++ +++.+.+..+ |...+.++...++...++++++|++++||+.. .+.+.+......|+++.
T Consensus 192 ~flScsNDg~Ir~w~~-~ge~l~~~~g-htn~vYsis~~~~~~~Ivs~gEDrtlriW~~~--e~~q~I~lPttsiWsa~ 266 (745)
T KOG0301|consen 192 HFLSCSNDGSIRLWDL-DGEVLLEMHG-HTNFVYSISMALSDGLIVSTGEDRTLRIWKKD--ECVQVITLPTTSIWSAK 266 (745)
T ss_pred CeEeecCCceEEEEec-cCceeeeeec-cceEEEEEEecCCCCeEEEecCCceEEEeecC--ceEEEEecCccceEEEE
Confidence 5789999999999998 6888888887 88889999988888899999999999999986 44444443333555544
No 166
>KOG1539|consensus
Probab=99.14 E-value=1.3e-09 Score=63.02 Aligned_cols=81 Identities=12% Similarity=0.182 Sum_probs=74.4
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEEE
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSLA 81 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~ 81 (85)
+.++.|+..|.+.+|++++++.+++++. ....|+++.-+|-=..++.|..+|.|.+++++..+.+.+|+...+.|++++
T Consensus 173 NKIvvGs~~G~lql~Nvrt~K~v~~f~~-~~s~IT~ieqsPaLDVVaiG~~~G~ViifNlK~dkil~sFk~d~g~VtslS 251 (910)
T KOG1539|consen 173 NKIVVGSSQGRLQLWNVRTGKVVYTFQE-FFSRITAIEQSPALDVVAIGLENGTVIIFNLKFDKILMSFKQDWGRVTSLS 251 (910)
T ss_pred eeEEEeecCCcEEEEEeccCcEEEEecc-cccceeEeccCCcceEEEEeccCceEEEEEcccCcEEEEEEccccceeEEE
Confidence 4678999999999999999999999998 668899999999889999999999999999999999999995569999999
Q ss_pred Ee
Q psy7058 82 FC 83 (85)
Q Consensus 82 ~~ 83 (85)
|.
T Consensus 252 Fr 253 (910)
T KOG1539|consen 252 FR 253 (910)
T ss_pred ec
Confidence 85
No 167
>KOG2048|consensus
Probab=99.14 E-value=1.2e-09 Score=61.85 Aligned_cols=82 Identities=23% Similarity=0.391 Sum_probs=65.4
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeec-------cCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccc
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGT-------ANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQ 74 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 74 (85)
..++.|+.|+.|++||+.++........ ....-++++.+-.+ ..+++|++.|.|.+||...+..++.+..|.
T Consensus 167 ~~i~~Gs~Dg~Iriwd~~~~~t~~~~~~~~d~l~k~~~~iVWSv~~Lrd-~tI~sgDS~G~V~FWd~~~gTLiqS~~~h~ 245 (691)
T KOG2048|consen 167 TKIAGGSIDGVIRIWDVKSGQTLHIITMQLDRLSKREPTIVWSVLFLRD-STIASGDSAGTVTFWDSIFGTLIQSHSCHD 245 (691)
T ss_pred cEEEecccCceEEEEEcCCCceEEEeeecccccccCCceEEEEEEEeec-CcEEEecCCceEEEEcccCcchhhhhhhhh
Confidence 3589999999999999998877662221 12345677776644 468899999999999999999999999999
Q ss_pred cceeEEEEeC
Q psy7058 75 KAITSLAFCD 84 (85)
Q Consensus 75 ~~v~~~~~~~ 84 (85)
..|.+++.++
T Consensus 246 adVl~Lav~~ 255 (691)
T KOG2048|consen 246 ADVLALAVAD 255 (691)
T ss_pred cceeEEEEcC
Confidence 9999988665
No 168
>KOG2394|consensus
Probab=99.12 E-value=8.6e-10 Score=61.31 Aligned_cols=53 Identities=23% Similarity=0.315 Sum_probs=48.3
Q ss_pred CcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEEEEeCC
Q psy7058 33 RWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSLAFCDF 85 (85)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 85 (85)
..|+..+|+|||+++++.+.|+.++|||..+.+.+..++.--+...|++|+|.
T Consensus 291 g~in~f~FS~DG~~LA~VSqDGfLRvF~fdt~eLlg~mkSYFGGLLCvcWSPD 343 (636)
T KOG2394|consen 291 GSINEFAFSPDGKYLATVSQDGFLRIFDFDTQELLGVMKSYFGGLLCVCWSPD 343 (636)
T ss_pred ccccceeEcCCCceEEEEecCceEEEeeccHHHHHHHHHhhccceEEEEEcCC
Confidence 46888999999999999999999999999998888888877889999999984
No 169
>KOG2919|consensus
Probab=99.11 E-value=3.9e-10 Score=59.49 Aligned_cols=85 Identities=13% Similarity=0.197 Sum_probs=62.8
Q ss_pred CceeEEeeC-CCcEEEeeCCCc-eeeeeeeccC--CCcEEEEEecCCCCEEEEEcCCCeEEEEEcCC-cccccccccccc
Q psy7058 1 MGLLATTSA-DQTARIWNTEDF-SLVRELGTAN--QRWVWDAAFTLDSKFLLTASSDGVARLWNIET-GEVDKEYSGHQK 75 (85)
Q Consensus 1 g~~l~~~~~-~~~i~~~d~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~ 75 (85)
|+.|.+|++ +..|..||++.- .++..+...- ...-.-....|++.++++|+.+|.|++||++. +.....+..+.+
T Consensus 262 Gn~lfsGaRk~dkIl~WDiR~~~~pv~~L~rhv~~TNQRI~FDld~~~~~LasG~tdG~V~vwdlk~~gn~~sv~~~~sd 341 (406)
T KOG2919|consen 262 GNKLFSGARKDDKILCWDIRYSRDPVYALERHVGDTNQRILFDLDPKGEILASGDTDGSVRVWDLKDLGNEVSVTGNYSD 341 (406)
T ss_pred cCeecccccCCCeEEEEeehhccchhhhhhhhccCccceEEEecCCCCceeeccCCCccEEEEecCCCCCcccccccccc
Confidence 456777764 678999999853 4555555411 12233345577899999999999999999987 676777777888
Q ss_pred ceeEEEEeCC
Q psy7058 76 AITSLAFCDF 85 (85)
Q Consensus 76 ~v~~~~~~~~ 85 (85)
.++.++++|.
T Consensus 342 ~vNgvslnP~ 351 (406)
T KOG2919|consen 342 TVNGVSLNPI 351 (406)
T ss_pred cccceecCcc
Confidence 9999998874
No 170
>KOG1036|consensus
Probab=99.11 E-value=2.3e-09 Score=55.98 Aligned_cols=79 Identities=23% Similarity=0.346 Sum_probs=63.8
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEEE
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSLA 81 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~ 81 (85)
+.|++++-|+.+++||+........+. +..++.+.+|.+ ...+++|+.|+.|+.+|+..++.. .+..|..+|+++.
T Consensus 26 ~~LLvssWDgslrlYdv~~~~l~~~~~--~~~plL~c~F~d-~~~~~~G~~dg~vr~~Dln~~~~~-~igth~~~i~ci~ 101 (323)
T KOG1036|consen 26 SDLLVSSWDGSLRLYDVPANSLKLKFK--HGAPLLDCAFAD-ESTIVTGGLDGQVRRYDLNTGNED-QIGTHDEGIRCIE 101 (323)
T ss_pred CcEEEEeccCcEEEEeccchhhhhhee--cCCceeeeeccC-CceEEEeccCceEEEEEecCCcce-eeccCCCceEEEE
Confidence 567888899999999998775555554 677899999985 567889999999999999877654 4455899999998
Q ss_pred EeC
Q psy7058 82 FCD 84 (85)
Q Consensus 82 ~~~ 84 (85)
+++
T Consensus 102 ~~~ 104 (323)
T KOG1036|consen 102 YSY 104 (323)
T ss_pred eec
Confidence 874
No 171
>KOG0268|consensus
Probab=99.11 E-value=2.2e-10 Score=61.03 Aligned_cols=80 Identities=13% Similarity=0.256 Sum_probs=64.0
Q ss_pred eEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCcccccccc-ccccceeEEEE
Q psy7058 4 LATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYS-GHQKAITSLAF 82 (85)
Q Consensus 4 l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~v~~~~~ 82 (85)
+.+++.|..++++|++..+.+......|...+.+++|+|.|+-+++|+-|.+|+||..+.+...-.+- ..-+.|.+++|
T Consensus 244 F~~a~ED~nlY~~DmR~l~~p~~v~~dhvsAV~dVdfsptG~EfvsgsyDksIRIf~~~~~~SRdiYhtkRMq~V~~Vk~ 323 (433)
T KOG0268|consen 244 FVAANEDHNLYTYDMRNLSRPLNVHKDHVSAVMDVDFSPTGQEFVSGSYDKSIRIFPVNHGHSRDIYHTKRMQHVFCVKY 323 (433)
T ss_pred eeeccccccceehhhhhhcccchhhcccceeEEEeccCCCcchhccccccceEEEeecCCCcchhhhhHhhhheeeEEEE
Confidence 57889999999999998766555555588889999999999999999999999999998776443332 12356777777
Q ss_pred e
Q psy7058 83 C 83 (85)
Q Consensus 83 ~ 83 (85)
|
T Consensus 324 S 324 (433)
T KOG0268|consen 324 S 324 (433)
T ss_pred e
Confidence 6
No 172
>KOG2048|consensus
Probab=99.10 E-value=3.9e-09 Score=59.86 Aligned_cols=83 Identities=16% Similarity=0.313 Sum_probs=71.2
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCcccc--cccccccccee
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVD--KEYSGHQKAIT 78 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~~~~~~~~~v~ 78 (85)
|.+|.+.+-+|.|.-||+.+++....+.. ..+.|++++.+|.+..++.+++||.+.++++..++.. ..+.-.++.+.
T Consensus 80 ~~RLFS~g~sg~i~EwDl~~lk~~~~~d~-~gg~IWsiai~p~~~~l~IgcddGvl~~~s~~p~~I~~~r~l~rq~sRvL 158 (691)
T KOG2048|consen 80 GGRLFSSGLSGSITEWDLHTLKQKYNIDS-NGGAIWSIAINPENTILAIGCDDGVLYDFSIGPDKITYKRSLMRQKSRVL 158 (691)
T ss_pred CCeEEeecCCceEEEEecccCceeEEecC-CCcceeEEEeCCccceEEeecCCceEEEEecCCceEEEEeecccccceEE
Confidence 46789999999999999999999998887 6778999999999999999999999988888776543 33555678999
Q ss_pred EEEEeC
Q psy7058 79 SLAFCD 84 (85)
Q Consensus 79 ~~~~~~ 84 (85)
+++|+|
T Consensus 159 slsw~~ 164 (691)
T KOG2048|consen 159 SLSWNP 164 (691)
T ss_pred EEEecC
Confidence 999987
No 173
>KOG0650|consensus
Probab=99.10 E-value=7.1e-10 Score=62.34 Aligned_cols=55 Identities=24% Similarity=0.450 Sum_probs=50.8
Q ss_pred cCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEEEEeCC
Q psy7058 30 ANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSLAFCDF 85 (85)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 85 (85)
+|.+.+.++...|.|.++++|+.||++++|.+.++.++.++. ..+.|.+++|+|.
T Consensus 398 GHtg~Vr~iSvdp~G~wlasGsdDGtvriWEi~TgRcvr~~~-~d~~I~~vaw~P~ 452 (733)
T KOG0650|consen 398 GHTGLVRSISVDPSGEWLASGSDDGTVRIWEIATGRCVRTVQ-FDSEIRSVAWNPL 452 (733)
T ss_pred ccCCeEEEEEecCCcceeeecCCCCcEEEEEeecceEEEEEe-ecceeEEEEecCC
Confidence 488899999999999999999999999999999999999887 5679999999984
No 174
>KOG2445|consensus
Probab=99.09 E-value=6.5e-09 Score=54.63 Aligned_cols=83 Identities=22% Similarity=0.262 Sum_probs=59.7
Q ss_pred CceeEEeeCCCcEEEeeCCC---------ceeeeeeeccCCCcEEEEEecC--CCCEEEEEcCCCeEEEEEcCCccccc-
Q psy7058 1 MGLLATTSADQTARIWNTED---------FSLVRELGTANQRWVWDAAFTL--DSKFLLTASSDGVARLWNIETGEVDK- 68 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~---------~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~i~~~~~~~~~~~~- 68 (85)
|+.+|+++.|+++.+|.-.. ......+.. ....+.++.|.| -|-.+++++.||.+|||+..+...+.
T Consensus 73 GqvvA~cS~Drtv~iWEE~~~~~~~~~~~Wv~~ttl~D-srssV~DV~FaP~hlGLklA~~~aDG~lRIYEA~dp~nLs~ 151 (361)
T KOG2445|consen 73 GQVVATCSYDRTVSIWEEQEKSEEAHGRRWVRRTTLVD-SRSSVTDVKFAPKHLGLKLAAASADGILRIYEAPDPMNLSQ 151 (361)
T ss_pred cceEEEEecCCceeeeeecccccccccceeEEEEEeec-CCcceeEEEecchhcceEEEEeccCcEEEEEecCCcccccc
Confidence 67899999999999997521 122333333 556799999999 47789999999999999986543222
Q ss_pred -----ccc-------ccccceeEEEEeC
Q psy7058 69 -----EYS-------GHQKAITSLAFCD 84 (85)
Q Consensus 69 -----~~~-------~~~~~v~~~~~~~ 84 (85)
.++ .+..+..|+.|+|
T Consensus 152 W~Lq~Ei~~~~~pp~~~~~~~~CvsWn~ 179 (361)
T KOG2445|consen 152 WTLQHEIQNVIDPPGKNKQPCFCVSWNP 179 (361)
T ss_pred chhhhhhhhccCCcccccCcceEEeecc
Confidence 122 3566778888876
No 175
>KOG1310|consensus
Probab=99.08 E-value=1.1e-09 Score=61.31 Aligned_cols=63 Identities=19% Similarity=0.501 Sum_probs=57.2
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecC--CCCEEEEEcCCCeEEEEEcCC
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTL--DSKFLLTASSDGVARLWNIET 63 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~i~~~~~~~ 63 (85)
|.+|++|+.|..+.|||...-+++..+..+|...|.++.|.| ....+++|..|..|++||+..
T Consensus 62 G~lL~SGSDD~r~ivWd~~~~KllhsI~TgHtaNIFsvKFvP~tnnriv~sgAgDk~i~lfdl~~ 126 (758)
T KOG1310|consen 62 GELLASGSDDTRLIVWDPFEYKLLHSISTGHTANIFSVKFVPYTNNRIVLSGAGDKLIKLFDLDS 126 (758)
T ss_pred CCEEeecCCcceEEeecchhcceeeeeecccccceeEEeeeccCCCeEEEeccCcceEEEEeccc
Confidence 678999999999999999988999999888999999999999 456788999999999999974
No 176
>KOG4547|consensus
Probab=99.06 E-value=4.1e-09 Score=58.75 Aligned_cols=77 Identities=26% Similarity=0.346 Sum_probs=68.3
Q ss_pred eEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEEEEe
Q psy7058 4 LATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSLAFC 83 (85)
Q Consensus 4 l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~ 83 (85)
+.+++.|..+.+|+.......+.... .+..+.+++.+||+..+++++ +.|.+||+.+.+.+.+|.+|..+|++++|.
T Consensus 117 iyS~~ad~~v~~~~~~~~~~~~~~~~-~~~~~~sl~is~D~~~l~~as--~~ik~~~~~~kevv~~ftgh~s~v~t~~f~ 193 (541)
T KOG4547|consen 117 IYSVGADLKVVYILEKEKVIIRIWKE-QKPLVSSLCISPDGKILLTAS--RQIKVLDIETKEVVITFTGHGSPVRTLSFT 193 (541)
T ss_pred eEecCCceeEEEEecccceeeeeecc-CCCccceEEEcCCCCEEEecc--ceEEEEEccCceEEEEecCCCcceEEEEEE
Confidence 67889999999999998888888776 556689999999999988765 689999999999999999999999999884
No 177
>KOG2919|consensus
Probab=99.06 E-value=1.6e-09 Score=57.29 Aligned_cols=83 Identities=22% Similarity=0.332 Sum_probs=62.1
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeecc-CC---CcEEEEEecCCCCEEEEEcCCCeEEEEEc-CCccccccc------
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTA-NQ---RWVWDAAFTLDSKFLLTASSDGVARLWNI-ETGEVDKEY------ 70 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~~~~------ 70 (85)
+++++.+++.-|++||..+++....+..- +. ....+++|+|||..++.| .+.+|++||+ +.++-...+
T Consensus 124 ~l~a~ssr~~PIh~wdaftG~lraSy~~ydh~de~taAhsL~Fs~DGeqlfaG-ykrcirvFdt~RpGr~c~vy~t~~~~ 202 (406)
T KOG2919|consen 124 NLFAVSSRDQPIHLWDAFTGKLRASYRAYDHQDEYTAAHSLQFSPDGEQLFAG-YKRCIRVFDTSRPGRDCPVYTTVTKG 202 (406)
T ss_pred ceeeeccccCceeeeeccccccccchhhhhhHHhhhhheeEEecCCCCeEeec-ccceEEEeeccCCCCCCcchhhhhcc
Confidence 46788999999999999999988777651 11 235789999999998875 6779999998 555422211
Q ss_pred -cccccceeEEEEeCC
Q psy7058 71 -SGHQKAITSLAFCDF 85 (85)
Q Consensus 71 -~~~~~~v~~~~~~~~ 85 (85)
.+..+.+.+++|+|.
T Consensus 203 k~gq~giisc~a~sP~ 218 (406)
T KOG2919|consen 203 KFGQKGIISCFAFSPM 218 (406)
T ss_pred cccccceeeeeeccCC
Confidence 134677888999883
No 178
>KOG0974|consensus
Probab=99.04 E-value=5.2e-09 Score=61.52 Aligned_cols=82 Identities=21% Similarity=0.323 Sum_probs=68.9
Q ss_pred eeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccc-cccccccceeEEE
Q psy7058 3 LLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDK-EYSGHQKAITSLA 81 (85)
Q Consensus 3 ~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~v~~~~ 81 (85)
++++|+.-+.|.+|+....+....+.+ |.+.+.++.++-+|.++++.++|..+++|++.+.+... ..-+|...+..+.
T Consensus 147 ~i~~gsv~~~iivW~~~~dn~p~~l~G-HeG~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~~~~~~~fgHsaRvw~~~ 225 (967)
T KOG0974|consen 147 YIASGSVFGEIIVWKPHEDNKPIRLKG-HEGSIFSIVTSLDGRYIASVSDDRSIRLWPIDSREVLGCTGFGHSARVWACC 225 (967)
T ss_pred EEEeccccccEEEEeccccCCcceecc-cCCceEEEEEccCCcEEEEEecCcceeeeecccccccCcccccccceeEEEE
Confidence 467888889999999884444444555 88899999999999999999999999999999888776 5667999999988
Q ss_pred EeCC
Q psy7058 82 FCDF 85 (85)
Q Consensus 82 ~~~~ 85 (85)
|.|.
T Consensus 226 ~~~n 229 (967)
T KOG0974|consen 226 FLPN 229 (967)
T ss_pred eccc
Confidence 8764
No 179
>KOG0301|consensus
Probab=99.04 E-value=2e-09 Score=61.17 Aligned_cols=75 Identities=33% Similarity=0.542 Sum_probs=60.9
Q ss_pred eeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEEEE
Q psy7058 3 LLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSLAF 82 (85)
Q Consensus 3 ~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~~ 82 (85)
.+++|+.|.+|++|.- ++....+.+ |...+..+++-++. .+++++.||.|+.|++ ++.++..+.+|..-+++++.
T Consensus 153 ~~vTgsaDKtIklWk~--~~~l~tf~g-HtD~VRgL~vl~~~-~flScsNDg~Ir~w~~-~ge~l~~~~ghtn~vYsis~ 227 (745)
T KOG0301|consen 153 TYVTGSADKTIKLWKG--GTLLKTFSG-HTDCVRGLAVLDDS-HFLSCSNDGSIRLWDL-DGEVLLEMHGHTNFVYSISM 227 (745)
T ss_pred cEEeccCcceeeeccC--Cchhhhhcc-chhheeeeEEecCC-CeEeecCCceEEEEec-cCceeeeeeccceEEEEEEe
Confidence 5788999999999984 667777777 88888888876554 5667889999999999 78888888889998888874
No 180
>KOG0280|consensus
Probab=99.02 E-value=1e-08 Score=53.57 Aligned_cols=82 Identities=12% Similarity=0.117 Sum_probs=60.2
Q ss_pred ceeEEeeCCCcEEEeeCCC-ceeeeeeeccCCCcEEEEEecC-CCCEEEEEcCCCeEEEEEcCC-cccccccccccccee
Q psy7058 2 GLLATTSADQTARIWNTED-FSLVRELGTANQRWVWDAAFTL-DSKFLLTASSDGVARLWNIET-GEVDKEYSGHQKAIT 78 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~v~ 78 (85)
+.+.+|+.|+.+.-||++- .+.+..-...|...+.++.-+| .+.++++|+-|-.|++||.++ ++++..-+ ..+.|.
T Consensus 179 nlvytGgDD~~l~~~D~R~p~~~i~~n~kvH~~GV~SI~ss~~~~~~I~TGsYDe~i~~~DtRnm~kPl~~~~-v~GGVW 257 (339)
T KOG0280|consen 179 NLVYTGGDDGSLSCWDIRIPKTFIWHNSKVHTSGVVSIYSSPPKPTYIATGSYDECIRVLDTRNMGKPLFKAK-VGGGVW 257 (339)
T ss_pred ceEEecCCCceEEEEEecCCcceeeecceeeecceEEEecCCCCCceEEEeccccceeeeehhcccCccccCc-cccceE
Confidence 5688999999999999993 3333332222555688887776 678999999999999999995 45554443 447777
Q ss_pred EEEEeC
Q psy7058 79 SLAFCD 84 (85)
Q Consensus 79 ~~~~~~ 84 (85)
-+.++|
T Consensus 258 Ri~~~p 263 (339)
T KOG0280|consen 258 RIKHHP 263 (339)
T ss_pred EEEecc
Confidence 777766
No 181
>KOG4328|consensus
Probab=99.01 E-value=1.9e-09 Score=58.82 Aligned_cols=61 Identities=33% Similarity=0.406 Sum_probs=48.8
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeee--e-eccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcC
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRE--L-GTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIE 62 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 62 (85)
.++++++.|++.++||++....... + ...|...|++..|+|++-.+++.+.|..|++||..
T Consensus 336 ~~laT~s~D~T~kIWD~R~l~~K~sp~lst~~HrrsV~sAyFSPs~gtl~TT~~D~~IRv~dss 399 (498)
T KOG4328|consen 336 WFLATASLDQTAKIWDLRQLRGKASPFLSTLPHRRSVNSAYFSPSGGTLLTTCQDNEIRVFDSS 399 (498)
T ss_pred hheeecccCcceeeeehhhhcCCCCcceecccccceeeeeEEcCCCCceEeeccCCceEEeecc
Confidence 3689999999999999986543332 1 12377889999999976669999999999999983
No 182
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=99.00 E-value=1.6e-08 Score=50.65 Aligned_cols=64 Identities=16% Similarity=0.334 Sum_probs=48.6
Q ss_pred CceeEEeeCC---CcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcC------CCeEEEEEcCCccccc
Q psy7058 1 MGLLATTSAD---QTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASS------DGVARLWNIETGEVDK 68 (85)
Q Consensus 1 g~~l~~~~~~---~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~i~~~~~~~~~~~~ 68 (85)
|++++.++.+ |.+.+||+++.+.+.... +. .+..+.|+|+|++++++.. |..++||+.. |+.+.
T Consensus 112 G~~l~~~g~~n~~G~l~~wd~~~~~~i~~~~--~~-~~t~~~WsPdGr~~~ta~t~~r~~~dng~~Iw~~~-G~~l~ 184 (194)
T PF08662_consen 112 GRFLVLAGFGNLNGDLEFWDVRKKKKISTFE--HS-DATDVEWSPDGRYLATATTSPRLRVDNGFKIWSFQ-GRLLY 184 (194)
T ss_pred CCEEEEEEccCCCcEEEEEECCCCEEeeccc--cC-cEEEEEEcCCCCEEEEEEeccceeccccEEEEEec-CeEeE
Confidence 5778887643 569999999888776654 33 3789999999999998764 6778999984 55443
No 183
>KOG1524|consensus
Probab=98.99 E-value=1.5e-09 Score=60.67 Aligned_cols=81 Identities=21% Similarity=0.304 Sum_probs=66.5
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEEE
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSLA 81 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~ 81 (85)
..++.+++||.+.+.+ +.+.....+.. |...+.+-+|+|+|.-+++.++||.|++|.- +|....++.....+|+|++
T Consensus 76 d~~~i~s~DGkf~il~-k~~rVE~sv~A-H~~A~~~gRW~~dGtgLlt~GEDG~iKiWSr-sGMLRStl~Q~~~~v~c~~ 152 (737)
T KOG1524|consen 76 DTLLICSNDGRFVILN-KSARVERSISA-HAAAISSGRWSPDGAGLLTAGEDGVIKIWSR-SGMLRSTVVQNEESIRCAR 152 (737)
T ss_pred ceEEEEcCCceEEEec-ccchhhhhhhh-hhhhhhhcccCCCCceeeeecCCceEEEEec-cchHHHHHhhcCceeEEEE
Confidence 3577888899888866 34555555555 8888999999999999999999999999984 5777777777889999999
Q ss_pred EeCC
Q psy7058 82 FCDF 85 (85)
Q Consensus 82 ~~~~ 85 (85)
|.|.
T Consensus 153 W~p~ 156 (737)
T KOG1524|consen 153 WAPN 156 (737)
T ss_pred ECCC
Confidence 9874
No 184
>KOG4328|consensus
Probab=98.97 E-value=3.1e-09 Score=58.05 Aligned_cols=81 Identities=16% Similarity=0.126 Sum_probs=61.5
Q ss_pred eEEeeCCCcEEEeeCCCceeee-eeeccCCCcEEEEEecCC-CCEEEEEcCCCeEEEEEcCCccc----cccccccccce
Q psy7058 4 LATTSADQTARIWNTEDFSLVR-ELGTANQRWVWDAAFTLD-SKFLLTASSDGVARLWNIETGEV----DKEYSGHQKAI 77 (85)
Q Consensus 4 l~~~~~~~~i~~~d~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~----~~~~~~~~~~v 77 (85)
++.+..-|...+||.++..... .+.. |...|..++++|. ..++++++.|++.+|||+++... +...-.|...|
T Consensus 294 vl~~~~~G~f~~iD~R~~~s~~~~~~l-h~kKI~sv~~NP~~p~~laT~s~D~T~kIWD~R~l~~K~sp~lst~~HrrsV 372 (498)
T KOG4328|consen 294 VLFGDNVGNFNVIDLRTDGSEYENLRL-HKKKITSVALNPVCPWFLATASLDQTAKIWDLRQLRGKASPFLSTLPHRRSV 372 (498)
T ss_pred EEEeecccceEEEEeecCCccchhhhh-hhcccceeecCCCCchheeecccCcceeeeehhhhcCCCCcceeccccccee
Confidence 5566666788999999876633 3333 5668999999995 56689999999999999986532 23334599999
Q ss_pred eEEEEeCC
Q psy7058 78 TSLAFCDF 85 (85)
Q Consensus 78 ~~~~~~~~ 85 (85)
++..|||.
T Consensus 373 ~sAyFSPs 380 (498)
T KOG4328|consen 373 NSAYFSPS 380 (498)
T ss_pred eeeEEcCC
Confidence 99999984
No 185
>KOG0307|consensus
Probab=98.95 E-value=2.9e-09 Score=62.99 Aligned_cols=82 Identities=22% Similarity=0.341 Sum_probs=66.0
Q ss_pred eeEEeeCC---CcEEEeeCCCceeeeeeeccCCCcEEEEEecCCC-CEEEEEcCCCeEEEEEcCCcccccccccccccee
Q psy7058 3 LLATTSAD---QTARIWNTEDFSLVRELGTANQRWVWDAAFTLDS-KFLLTASSDGVARLWNIETGEVDKEYSGHQKAIT 78 (85)
Q Consensus 3 ~l~~~~~~---~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~ 78 (85)
.+++++.| ..|.+||++......+....|...|.++.|.+.+ .++++++.|+.+.+|+.++++.+..+....+=++
T Consensus 221 ql~~As~dd~~PviqlWDlR~assP~k~~~~H~~GilslsWc~~D~~lllSsgkD~~ii~wN~~tgEvl~~~p~~~nW~f 300 (1049)
T KOG0307|consen 221 QLLVASGDDSAPVIQLWDLRFASSPLKILEGHQRGILSLSWCPQDPRLLLSSGKDNRIICWNPNTGEVLGELPAQGNWCF 300 (1049)
T ss_pred eeeeecCCCCCceeEeecccccCCchhhhcccccceeeeccCCCCchhhhcccCCCCeeEecCCCceEeeecCCCCccee
Confidence 34555544 3588999987655544444488889999999954 8899999999999999999999999988788888
Q ss_pred EEEEeC
Q psy7058 79 SLAFCD 84 (85)
Q Consensus 79 ~~~~~~ 84 (85)
.+.|.|
T Consensus 301 dv~w~p 306 (1049)
T KOG0307|consen 301 DVQWCP 306 (1049)
T ss_pred eeeecC
Confidence 898876
No 186
>KOG1188|consensus
Probab=98.95 E-value=6.9e-09 Score=55.03 Aligned_cols=65 Identities=20% Similarity=0.336 Sum_probs=54.7
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecC--CCCEEEEEcCCCeEEEEEcCCcccc
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTL--DSKFLLTASSDGVARLWNIETGEVD 67 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~i~~~~~~~~~~~ 67 (85)
..++++-..+.+++||..+++....+.. ++..++.++|.. ....+.+++.||+|++||++.....
T Consensus 41 ~~vav~lSngsv~lyd~~tg~~l~~fk~-~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~ 107 (376)
T KOG1188|consen 41 TAVAVSLSNGSVRLYDKGTGQLLEEFKG-PPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAES 107 (376)
T ss_pred eeEEEEecCCeEEEEeccchhhhheecC-CCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhh
Confidence 3578888999999999999999988887 777788888877 4567889999999999999876443
No 187
>KOG2110|consensus
Probab=98.95 E-value=2.4e-08 Score=53.45 Aligned_cols=63 Identities=24% Similarity=0.362 Sum_probs=54.9
Q ss_pred CceeEEeeCCCc-EEEeeCCCceeeeeeecc-CCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCC
Q psy7058 1 MGLLATTSADQT-ARIWNTEDFSLVRELGTA-NQRWVWDAAFTLDSKFLLTASSDGVARLWNIET 63 (85)
Q Consensus 1 g~~l~~~~~~~~-i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 63 (85)
|.+||+++..|+ |+|+++.+++.+.+++.+ ....|.+++|++++++++..+..++|.+|.+..
T Consensus 185 G~llATASeKGTVIRVf~v~~G~kl~eFRRG~~~~~IySL~Fs~ds~~L~~sS~TeTVHiFKL~~ 249 (391)
T KOG2110|consen 185 GTLLATASEKGTVIRVFSVPEGQKLYEFRRGTYPVSIYSLSFSPDSQFLAASSNTETVHIFKLEK 249 (391)
T ss_pred CCEEEEeccCceEEEEEEcCCccEeeeeeCCceeeEEEEEEECCCCCeEEEecCCCeEEEEEecc
Confidence 678999998886 779999999999998864 345688999999999999999999999998864
No 188
>KOG2106|consensus
Probab=98.94 E-value=6.1e-08 Score=54.04 Aligned_cols=53 Identities=15% Similarity=0.206 Sum_probs=41.6
Q ss_pred CCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCcc-ccccc-cccccceeEEEEeC
Q psy7058 32 QRWVWDAAFTLDSKFLLTASSDGVARLWNIETGE-VDKEY-SGHQKAITSLAFCD 84 (85)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~-~~~~~~v~~~~~~~ 84 (85)
+.+++.++++|+|.+++.++.|+.|++|.+.... ..... ..+..+|..+.|++
T Consensus 447 ~~~ls~v~ysp~G~~lAvgs~d~~iyiy~Vs~~g~~y~r~~k~~gs~ithLDwS~ 501 (626)
T KOG2106|consen 447 NEQLSVVRYSPDGAFLAVGSHDNHIYIYRVSANGRKYSRVGKCSGSPITHLDWSS 501 (626)
T ss_pred CCceEEEEEcCCCCEEEEecCCCeEEEEEECCCCcEEEEeeeecCceeEEeeecC
Confidence 5679999999999999999999999999986543 22222 23448899999876
No 189
>COG2319 FOG: WD40 repeat [General function prediction only]
Probab=98.94 E-value=5.4e-08 Score=52.00 Aligned_cols=77 Identities=35% Similarity=0.604 Sum_probs=65.0
Q ss_pred eeCCCcEEEeeCCC-ceeeeeeeccCCCcEEEEEecCCCCEEEEEcC-CCeEEEEEcCCccccccccccccceeEEEEeC
Q psy7058 7 TSADQTARIWNTED-FSLVRELGTANQRWVWDAAFTLDSKFLLTASS-DGVARLWNIETGEVDKEYSGHQKAITSLAFCD 84 (85)
Q Consensus 7 ~~~~~~i~~~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 84 (85)
+..++.+.+|+... ......+.. +...+..+.++|++..++.++. ++.+++|++.....+..+..|...+.+++|+|
T Consensus 130 ~~~d~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 208 (466)
T COG2319 130 SSLDGTVKLWDLSTPGKLIRTLEG-HSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGKPLSTLAGHTDPVSSLAFSP 208 (466)
T ss_pred CCCCccEEEEEecCCCeEEEEEec-CcccEEEEEECCCCCEEEecCCCCCceEEEEcCCCceEEeeccCCCceEEEEEcC
Confidence 34488999999987 566666665 7777999999999998888875 99999999998888888888999999999875
No 190
>KOG3881|consensus
Probab=98.94 E-value=1.3e-08 Score=54.70 Aligned_cols=67 Identities=10% Similarity=0.008 Sum_probs=58.1
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCcccc
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVD 67 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 67 (85)
|++++++...+.+..||.+.++.......+-.+.+.++..+|.++++++++.|+.+||+|+++.+.+
T Consensus 259 gn~Iy~gn~~g~l~~FD~r~~kl~g~~~kg~tGsirsih~hp~~~~las~GLDRyvRIhD~ktrkll 325 (412)
T KOG3881|consen 259 GNFIYTGNTKGQLAKFDLRGGKLLGCGLKGITGSIRSIHCHPTHPVLASCGLDRYVRIHDIKTRKLL 325 (412)
T ss_pred CcEEEEecccchhheecccCceeeccccCCccCCcceEEEcCCCceEEeeccceeEEEeecccchhh
Confidence 5788999999999999999999888744436677999999999999999999999999999885543
No 191
>KOG0321|consensus
Probab=98.93 E-value=5.1e-09 Score=59.29 Aligned_cols=82 Identities=21% Similarity=0.367 Sum_probs=67.0
Q ss_pred eeEEeeCCCcEEEeeCCCceee-----eeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCcccccc--cccccc
Q psy7058 3 LLATTSADQTARIWNTEDFSLV-----RELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKE--YSGHQK 75 (85)
Q Consensus 3 ~l~~~~~~~~i~~~d~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~--~~~~~~ 75 (85)
.|+.+..+|.|.++|.....-. ......|...|..+.|.|....|++.+.|.++++||++..+.... +.+|..
T Consensus 66 iLavadE~G~i~l~dt~~~~fr~ee~~lk~~~aH~nAifDl~wapge~~lVsasGDsT~r~Wdvk~s~l~G~~~~~GH~~ 145 (720)
T KOG0321|consen 66 ILAVADEDGGIILFDTKSIVFRLEERQLKKPLAHKNAIFDLKWAPGESLLVSASGDSTIRPWDVKTSRLVGGRLNLGHTG 145 (720)
T ss_pred eEEEecCCCceeeecchhhhcchhhhhhcccccccceeEeeccCCCceeEEEccCCceeeeeeeccceeecceeeccccc
Confidence 5788999999999998754332 112224778899999999777889999999999999999888776 889999
Q ss_pred ceeEEEEeC
Q psy7058 76 AITSLAFCD 84 (85)
Q Consensus 76 ~v~~~~~~~ 84 (85)
.|.+++|.|
T Consensus 146 SvkS~cf~~ 154 (720)
T KOG0321|consen 146 SVKSECFMP 154 (720)
T ss_pred ccchhhhcc
Confidence 999998876
No 192
>KOG3881|consensus
Probab=98.91 E-value=2.5e-08 Score=53.71 Aligned_cols=82 Identities=16% Similarity=0.211 Sum_probs=69.4
Q ss_pred ceeEEeeCCCcEEEeeCCCcee-eeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCcccccc-ccccccceeE
Q psy7058 2 GLLATTSADQTARIWNTEDFSL-VRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKE-YSGHQKAITS 79 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~~~~v~~ 79 (85)
..++++..-+.+++||.+.+.. +.++.. ...++.++...|++++++++...+.+..||++.++.+.. +.+..+.|++
T Consensus 217 ~~fat~T~~hqvR~YDt~~qRRPV~~fd~-~E~~is~~~l~p~gn~Iy~gn~~g~l~~FD~r~~kl~g~~~kg~tGsirs 295 (412)
T KOG3881|consen 217 YKFATITRYHQVRLYDTRHQRRPVAQFDF-LENPISSTGLTPSGNFIYTGNTKGQLAKFDLRGGKLLGCGLKGITGSIRS 295 (412)
T ss_pred ceEEEEecceeEEEecCcccCcceeEecc-ccCcceeeeecCCCcEEEEecccchhheecccCceeeccccCCccCCcce
Confidence 4689999999999999997644 445544 567799999999999999999999999999999998876 7788888888
Q ss_pred EEEeC
Q psy7058 80 LAFCD 84 (85)
Q Consensus 80 ~~~~~ 84 (85)
+..+|
T Consensus 296 ih~hp 300 (412)
T KOG3881|consen 296 IHCHP 300 (412)
T ss_pred EEEcC
Confidence 87766
No 193
>KOG0649|consensus
Probab=98.91 E-value=2.7e-08 Score=51.14 Aligned_cols=67 Identities=18% Similarity=0.457 Sum_probs=47.1
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccC---------CCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCcccccccc
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTAN---------QRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYS 71 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 71 (85)
..+++|+.||++++||.++++.+..+.... ...|-++ .-+..+++.| ....+.+|.++..++...+.
T Consensus 169 ~qilsG~EDGtvRvWd~kt~k~v~~ie~yk~~~~lRp~~g~wigal--a~~edWlvCG-gGp~lslwhLrsse~t~vfp 244 (325)
T KOG0649|consen 169 GQILSGAEDGTVRVWDTKTQKHVSMIEPYKNPNLLRPDWGKWIGAL--AVNEDWLVCG-GGPKLSLWHLRSSESTCVFP 244 (325)
T ss_pred cceeecCCCccEEEEeccccceeEEeccccChhhcCcccCceeEEE--eccCceEEec-CCCceeEEeccCCCceEEEe
Confidence 458899999999999999999887765411 1223333 3356677665 44578899999887665554
No 194
>KOG0650|consensus
Probab=98.90 E-value=5.4e-08 Score=55.17 Aligned_cols=28 Identities=36% Similarity=0.419 Sum_probs=24.1
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeee
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELG 28 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~ 28 (85)
|.+|++|+.||++++|.+.++.++..+.
T Consensus 412 G~wlasGsdDGtvriWEi~TgRcvr~~~ 439 (733)
T KOG0650|consen 412 GEWLASGSDDGTVRIWEIATGRCVRTVQ 439 (733)
T ss_pred cceeeecCCCCcEEEEEeecceEEEEEe
Confidence 6789999999999999998887766654
No 195
>KOG1273|consensus
Probab=98.89 E-value=7e-09 Score=54.81 Aligned_cols=51 Identities=20% Similarity=0.300 Sum_probs=48.1
Q ss_pred EEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEEEEeCC
Q psy7058 35 VWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSLAFCDF 85 (85)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 85 (85)
..++.|++.|.+++.|+.+|.+-|||+.+-...+.+.+|..+|.+++||+.
T Consensus 26 a~~~~Fs~~G~~lAvGc~nG~vvI~D~~T~~iar~lsaH~~pi~sl~WS~d 76 (405)
T KOG1273|consen 26 AECCQFSRWGDYLAVGCANGRVVIYDFDTFRIARMLSAHVRPITSLCWSRD 76 (405)
T ss_pred cceEEeccCcceeeeeccCCcEEEEEccccchhhhhhccccceeEEEecCC
Confidence 789999999999999999999999999998888899999999999999873
No 196
>KOG2106|consensus
Probab=98.89 E-value=3.7e-08 Score=54.84 Aligned_cols=78 Identities=17% Similarity=0.190 Sum_probs=61.5
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEEE
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSLA 81 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~ 81 (85)
+++++++.|+.+++|+ ..++..... ...+..++.|+|.| .++.|...|...+.|..+... .++...+++++.++
T Consensus 381 ~q~~T~gqdk~v~lW~--~~k~~wt~~--~~d~~~~~~fhpsg-~va~Gt~~G~w~V~d~e~~~l-v~~~~d~~~ls~v~ 454 (626)
T KOG2106|consen 381 NQLLTCGQDKHVRLWN--DHKLEWTKI--IEDPAECADFHPSG-VVAVGTATGRWFVLDTETQDL-VTIHTDNEQLSVVR 454 (626)
T ss_pred hheeeccCcceEEEcc--CCceeEEEE--ecCceeEeeccCcc-eEEEeeccceEEEEeccccee-EEEEecCCceEEEE
Confidence 4689999999999999 444444444 34568999999999 999999999999999988443 44444588999999
Q ss_pred EeCC
Q psy7058 82 FCDF 85 (85)
Q Consensus 82 ~~~~ 85 (85)
|+|.
T Consensus 455 ysp~ 458 (626)
T KOG2106|consen 455 YSPD 458 (626)
T ss_pred EcCC
Confidence 9984
No 197
>KOG0321|consensus
Probab=98.87 E-value=6e-09 Score=59.00 Aligned_cols=62 Identities=26% Similarity=0.353 Sum_probs=52.0
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeee--eeccCCCcEEEEEecCC-CCEEEEEcCCCeEEEEEcCCc
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRE--LGTANQRWVWDAAFTLD-SKFLLTASSDGVARLWNIETG 64 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~ 64 (85)
..|++++-|.++++||+........ ..+ |...+.+++|.+. ...|++|+.|+.+.|||++..
T Consensus 113 ~~lVsasGDsT~r~Wdvk~s~l~G~~~~~G-H~~SvkS~cf~~~n~~vF~tGgRDg~illWD~R~n 177 (720)
T KOG0321|consen 113 SLLVSASGDSTIRPWDVKTSRLVGGRLNLG-HTGSVKSECFMPTNPAVFCTGGRDGEILLWDCRCN 177 (720)
T ss_pred eeEEEccCCceeeeeeeccceeecceeecc-cccccchhhhccCCCcceeeccCCCcEEEEEEecc
Confidence 3578999999999999998877665 444 8888999999995 566889999999999999743
No 198
>KOG2139|consensus
Probab=98.86 E-value=7.3e-08 Score=51.87 Aligned_cols=82 Identities=16% Similarity=0.247 Sum_probs=56.0
Q ss_pred ceeEEee-CCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEE
Q psy7058 2 GLLATTS-ADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSL 80 (85)
Q Consensus 2 ~~l~~~~-~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~ 80 (85)
..+++++ .|..|.+||..++........ ..+.+.-+.|+||+.+++.+.-|+..++|+..+...-.......+.|...
T Consensus 208 t~l~tAS~gsssi~iWdpdtg~~~pL~~~-glgg~slLkwSPdgd~lfaAt~davfrlw~e~q~wt~erw~lgsgrvqta 286 (445)
T KOG2139|consen 208 TILVTASFGSSSIMIWDPDTGQKIPLIPK-GLGGFSLLKWSPDGDVLFAATCDAVFRLWQENQSWTKERWILGSGRVQTA 286 (445)
T ss_pred CEEeecccCcceEEEEcCCCCCccccccc-CCCceeeEEEcCCCCEEEEecccceeeeehhcccceecceeccCCceeee
Confidence 4456665 456899999998877665533 34558889999999999999999999999665432221121123356666
Q ss_pred EEeC
Q psy7058 81 AFCD 84 (85)
Q Consensus 81 ~~~~ 84 (85)
.|+|
T Consensus 287 cWsp 290 (445)
T KOG2139|consen 287 CWSP 290 (445)
T ss_pred eecC
Confidence 6655
No 199
>KOG4227|consensus
Probab=98.85 E-value=3.1e-08 Score=53.93 Aligned_cols=84 Identities=17% Similarity=0.268 Sum_probs=65.2
Q ss_pred CceeEEeeCCCcEEEeeCC------CceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCcccccccccc-
Q psy7058 1 MGLLATTSADQTARIWNTE------DFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGH- 73 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~- 73 (85)
+++|++|+.|...++|++. +.+++......|...|.++.|.....++++|..++.+...|+.+.+.+..+...
T Consensus 68 ~~~L~SGGDD~~~~~W~~de~~~~k~~KPI~~~~~~H~SNIF~L~F~~~N~~~~SG~~~~~VI~HDiEt~qsi~V~~~~~ 147 (609)
T KOG4227|consen 68 DRFLASGGDDMHGRVWNVDELMVRKTPKPIGVMEHPHRSNIFSLEFDLENRFLYSGERWGTVIKHDIETKQSIYVANENN 147 (609)
T ss_pred CeEEeecCCcceeeeechHHHHhhcCCCCceeccCccccceEEEEEccCCeeEecCCCcceeEeeecccceeeeeecccC
Confidence 5789999999999999984 335555444446678999999999999999999999999999988777666522
Q ss_pred -ccceeEEEEeC
Q psy7058 74 -QKAITSLAFCD 84 (85)
Q Consensus 74 -~~~v~~~~~~~ 84 (85)
.+.|+.+..+|
T Consensus 148 ~~~~VY~m~~~P 159 (609)
T KOG4227|consen 148 NRGDVYHMDQHP 159 (609)
T ss_pred cccceeecccCC
Confidence 23676666554
No 200
>KOG2055|consensus
Probab=98.82 E-value=6.8e-08 Score=53.15 Aligned_cols=69 Identities=19% Similarity=0.332 Sum_probs=61.3
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCcccccccc
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYS 71 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 71 (85)
+++|+..+..|.|.+....+++.+..++. .+.+..++|+.+++.++..+.+|.|.+||+++..++..+.
T Consensus 315 ~~fia~~G~~G~I~lLhakT~eli~s~Ki--eG~v~~~~fsSdsk~l~~~~~~GeV~v~nl~~~~~~~rf~ 383 (514)
T KOG2055|consen 315 SNFIAIAGNNGHIHLLHAKTKELITSFKI--EGVVSDFTFSSDSKELLASGGTGEVYVWNLRQNSCLHRFV 383 (514)
T ss_pred CCeEEEcccCceEEeehhhhhhhhheeee--ccEEeeEEEecCCcEEEEEcCCceEEEEecCCcceEEEEe
Confidence 46899999999999999999999888875 5669999999999999999999999999999988777665
No 201
>KOG1963|consensus
Probab=98.79 E-value=1.6e-07 Score=54.69 Aligned_cols=84 Identities=23% Similarity=0.287 Sum_probs=62.4
Q ss_pred CceeEEeeCCCcEEEeeCCC--c-eeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccce
Q psy7058 1 MGLLATTSADQTARIWNTED--F-SLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAI 77 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v 77 (85)
+++++++..||.|.+|.-.. . ....++..=|...++++.|+++|.++++|+..+.+-.|.+.+++ .+-++--..+|
T Consensus 217 ~~~~Aa~d~dGrI~vw~d~~~~~~~~t~t~lHWH~~~V~~L~fS~~G~~LlSGG~E~VLv~Wq~~T~~-kqfLPRLgs~I 295 (792)
T KOG1963|consen 217 ERYLAAGDSDGRILVWRDFGSSDDSETCTLLHWHHDEVNSLSFSSDGAYLLSGGREGVLVLWQLETGK-KQFLPRLGSPI 295 (792)
T ss_pred cceEEEeccCCcEEEEeccccccccccceEEEecccccceeEEecCCceEeecccceEEEEEeecCCC-cccccccCCee
Confidence 46789999999999997543 1 11111111155679999999999999999999999999998877 33344456788
Q ss_pred eEEEEeCC
Q psy7058 78 TSLAFCDF 85 (85)
Q Consensus 78 ~~~~~~~~ 85 (85)
..+.++|.
T Consensus 296 ~~i~vS~d 303 (792)
T KOG1963|consen 296 LHIVVSPD 303 (792)
T ss_pred EEEEEcCC
Confidence 88888763
No 202
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=98.77 E-value=8.3e-07 Score=48.52 Aligned_cols=69 Identities=19% Similarity=0.149 Sum_probs=53.8
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEc-CCCeEEEEEcCCcccccccc
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTAS-SDGVARLWNIETGEVDKEYS 71 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~ 71 (85)
|+++.++++|+.+.++|+.+.+.+.++..+ .....+++++||++++.+. .++.+.++|.++.++++.+.
T Consensus 48 gr~~yv~~rdg~vsviD~~~~~~v~~i~~G--~~~~~i~~s~DG~~~~v~n~~~~~v~v~D~~tle~v~~I~ 117 (369)
T PF02239_consen 48 GRYLYVANRDGTVSVIDLATGKVVATIKVG--GNPRGIAVSPDGKYVYVANYEPGTVSVIDAETLEPVKTIP 117 (369)
T ss_dssp SSEEEEEETTSEEEEEETTSSSEEEEEE-S--SEEEEEEE--TTTEEEEEEEETTEEEEEETTT--EEEEEE
T ss_pred CCEEEEEcCCCeEEEEECCcccEEEEEecC--CCcceEEEcCCCCEEEEEecCCCceeEeccccccceeecc
Confidence 467888889999999999999999988863 3468899999999988765 58899999999888777665
No 203
>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats.
Probab=98.77 E-value=2.9e-07 Score=51.91 Aligned_cols=58 Identities=12% Similarity=0.110 Sum_probs=48.2
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcC
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIE 62 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 62 (85)
++++.|+.||.+.+||...+..... + ..-..+.++|+|+|..++.++..|.+.+||+.
T Consensus 272 ~kLvlGC~DgSiiLyD~~~~~t~~~-k--a~~~P~~iaWHp~gai~~V~s~qGelQ~FD~A 329 (545)
T PF11768_consen 272 DKLVLGCEDGSIILYDTTRGVTLLA-K--AEFIPTLIAWHPDGAIFVVGSEQGELQCFDMA 329 (545)
T ss_pred ceEEEEecCCeEEEEEcCCCeeeee-e--ecccceEEEEcCCCcEEEEEcCCceEEEEEee
Confidence 5789999999999999876644332 2 33457899999999999999999999999985
No 204
>KOG1272|consensus
Probab=98.77 E-value=1.5e-08 Score=55.75 Aligned_cols=81 Identities=17% Similarity=0.138 Sum_probs=72.3
Q ss_pred eeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEEEE
Q psy7058 3 LLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSLAF 82 (85)
Q Consensus 3 ~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~~ 82 (85)
+|+++++.|.++.-|+.+|+.+..+.. ..+.+..++.+|-.-.+-+|..+|+|.+|......++..+..|.++|.++++
T Consensus 223 LL~~~~~~G~L~Y~DVS~GklVa~~~t-~~G~~~vm~qNP~NaVih~GhsnGtVSlWSP~skePLvKiLcH~g~V~siAv 301 (545)
T KOG1272|consen 223 LLVAASEAGFLKYQDVSTGKLVASIRT-GAGRTDVMKQNPYNAVIHLGHSNGTVSLWSPNSKEPLVKILCHRGPVSSIAV 301 (545)
T ss_pred eeeecccCCceEEEeechhhhhHHHHc-cCCccchhhcCCccceEEEcCCCceEEecCCCCcchHHHHHhcCCCcceEEE
Confidence 468888999999999999999998887 5556788888988888889999999999999999999999999999999998
Q ss_pred eC
Q psy7058 83 CD 84 (85)
Q Consensus 83 ~~ 84 (85)
.+
T Consensus 302 ~~ 303 (545)
T KOG1272|consen 302 DR 303 (545)
T ss_pred CC
Confidence 76
No 205
>COG2319 FOG: WD40 repeat [General function prediction only]
Probab=98.76 E-value=6.2e-07 Score=48.00 Aligned_cols=80 Identities=31% Similarity=0.539 Sum_probs=60.3
Q ss_pred eeEEeeC-CCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCC-EEEEEcCCCeEEEEEcCCccccc-cccccccceeE
Q psy7058 3 LLATTSA-DQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSK-FLLTASSDGVARLWNIETGEVDK-EYSGHQKAITS 79 (85)
Q Consensus 3 ~l~~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~v~~ 79 (85)
.+++++. ++.+++|+.........+.. +...+.++.++|++. .+++++.++.+++||...+.... .+..|.... .
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~-~ 246 (466)
T COG2319 169 LLASGSSLDGTIKLWDLRTGKPLSTLAG-HTDPVSSLAFSPDGGLLIASGSSDGTIRLWDLSTGKLLRSTLSGHSDSV-V 246 (466)
T ss_pred EEEecCCCCCceEEEEcCCCceEEeecc-CCCceEEEEEcCCcceEEEEecCCCcEEEEECCCCcEEeeecCCCCcce-e
Confidence 4666665 99999999998777777766 778899999999887 55555899999999988666666 566666553 2
Q ss_pred EEEeC
Q psy7058 80 LAFCD 84 (85)
Q Consensus 80 ~~~~~ 84 (85)
..|+|
T Consensus 247 ~~~~~ 251 (466)
T COG2319 247 SSFSP 251 (466)
T ss_pred EeECC
Confidence 24444
No 206
>KOG3914|consensus
Probab=98.73 E-value=7.9e-08 Score=51.87 Aligned_cols=69 Identities=20% Similarity=0.363 Sum_probs=55.3
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCcccccccc
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYS 71 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 71 (85)
++++++.+|+.|++-..........+-.+|...|..+++-++. .+++++.|+++++||+.+++.+.++.
T Consensus 164 ~~IitaDRDEkIRvs~ypa~f~IesfclGH~eFVS~isl~~~~-~LlS~sGD~tlr~Wd~~sgk~L~t~d 232 (390)
T KOG3914|consen 164 QFIITADRDEKIRVSRYPATFVIESFCLGHKEFVSTISLTDNY-LLLSGSGDKTLRLWDITSGKLLDTCD 232 (390)
T ss_pred CEEEEecCCceEEEEecCcccchhhhccccHhheeeeeeccCc-eeeecCCCCcEEEEecccCCcccccc
Confidence 6789999999999877776666666655688889999887544 48899999999999999998775543
No 207
>KOG2096|consensus
Probab=98.73 E-value=6.3e-08 Score=51.47 Aligned_cols=61 Identities=26% Similarity=0.334 Sum_probs=50.4
Q ss_pred CceeEEeeCCCcEEEeeCCC---c-----eeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcC
Q psy7058 1 MGLLATTSADQTARIWNTED---F-----SLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIE 62 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~---~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 62 (85)
|+++++++-...+++|...- | ..+.++.+ |...+...+|+++....++.+.||.+++||+.
T Consensus 240 GRFia~~gFTpDVkVwE~~f~kdG~fqev~rvf~LkG-H~saV~~~aFsn~S~r~vtvSkDG~wriwdtd 308 (420)
T KOG2096|consen 240 GRFIAVSGFTPDVKVWEPIFTKDGTFQEVKRVFSLKG-HQSAVLAAAFSNSSTRAVTVSKDGKWRIWDTD 308 (420)
T ss_pred CcEEEEecCCCCceEEEEEeccCcchhhhhhhheecc-chhheeeeeeCCCcceeEEEecCCcEEEeecc
Confidence 67899999889999998742 2 22345555 88889999999999999999999999999974
No 208
>KOG2321|consensus
Probab=98.72 E-value=2.3e-07 Score=52.58 Aligned_cols=82 Identities=23% Similarity=0.307 Sum_probs=62.8
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeecc-----C-----CCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCcccccccc
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTA-----N-----QRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYS 71 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~-----~-----~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 71 (85)
.+|++|+.++.+-.||.++...+..+... + ...++++.|+-+|-.++.|..+|.+.|||++..+++..-.
T Consensus 188 gLla~Gt~~g~VEfwDpR~ksrv~~l~~~~~v~s~pg~~~~~svTal~F~d~gL~~aVGts~G~v~iyDLRa~~pl~~kd 267 (703)
T KOG2321|consen 188 GLLACGTEDGVVEFWDPRDKSRVGTLDAASSVNSHPGGDAAPSVTALKFRDDGLHVAVGTSTGSVLIYDLRASKPLLVKD 267 (703)
T ss_pred ceEEecccCceEEEecchhhhhheeeecccccCCCccccccCcceEEEecCCceeEEeeccCCcEEEEEcccCCceeecc
Confidence 46788888999999999987766665432 1 1248999999889999999999999999999887765443
Q ss_pred -ccccceeEEEEe
Q psy7058 72 -GHQKAITSLAFC 83 (85)
Q Consensus 72 -~~~~~v~~~~~~ 83 (85)
...-+|..+.|.
T Consensus 268 h~~e~pi~~l~~~ 280 (703)
T KOG2321|consen 268 HGYELPIKKLDWQ 280 (703)
T ss_pred cCCccceeeeccc
Confidence 234566666664
No 209
>KOG0771|consensus
Probab=98.72 E-value=3.2e-08 Score=53.50 Aligned_cols=50 Identities=26% Similarity=0.290 Sum_probs=46.6
Q ss_pred EEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEEEEeCC
Q psy7058 36 WDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSLAFCDF 85 (85)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 85 (85)
..++++.+|..+++++.||++|+|+.++...+.....|...|.++.|+|.
T Consensus 148 k~vaf~~~gs~latgg~dg~lRv~~~Ps~~t~l~e~~~~~eV~DL~FS~d 197 (398)
T KOG0771|consen 148 KVVAFNGDGSKLATGGTDGTLRVWEWPSMLTILEEIAHHAEVKDLDFSPD 197 (398)
T ss_pred eEEEEcCCCCEeeeccccceEEEEecCcchhhhhhHhhcCccccceeCCC
Confidence 57899999999999999999999999999988888889999999999984
No 210
>KOG1523|consensus
Probab=98.71 E-value=1.9e-07 Score=49.49 Aligned_cols=83 Identities=16% Similarity=0.212 Sum_probs=66.2
Q ss_pred ceeEEeeCCCcEEEeeCCCce---eeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCc---ccccccccccc
Q psy7058 2 GLLATTSADQTARIWNTEDFS---LVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETG---EVDKEYSGHQK 75 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~~~~~~~~~ 75 (85)
..++.+.+...+.+|...... ....+.. |...++.++|+|....+++++.|..-++|...++ ++...+..++.
T Consensus 23 t~iAv~~~~~evhiy~~~~~~~w~~~htls~-Hd~~vtgvdWap~snrIvtcs~drnayVw~~~~~~~WkptlvLlRiNr 101 (361)
T KOG1523|consen 23 TQIAVSPNNHEVHIYSMLGADLWEPAHTLSE-HDKIVTGVDWAPKSNRIVTCSHDRNAYVWTQPSGGTWKPTLVLLRINR 101 (361)
T ss_pred ceEEeccCCceEEEEEecCCCCceeceehhh-hCcceeEEeecCCCCceeEccCCCCccccccCCCCeeccceeEEEecc
Confidence 457788888889998877554 4445554 7788999999999999999999999999998543 45556666888
Q ss_pred ceeEEEEeCC
Q psy7058 76 AITSLAFCDF 85 (85)
Q Consensus 76 ~v~~~~~~~~ 85 (85)
..+++.|+|.
T Consensus 102 AAt~V~WsP~ 111 (361)
T KOG1523|consen 102 AATCVKWSPK 111 (361)
T ss_pred ceeeEeecCc
Confidence 9999999884
No 211
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=98.70 E-value=1.4e-06 Score=47.69 Aligned_cols=78 Identities=15% Similarity=0.196 Sum_probs=55.7
Q ss_pred EEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEEEEeC
Q psy7058 5 ATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSLAFCD 84 (85)
Q Consensus 5 ~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 84 (85)
++-..++.+.+.|..+.+.+.++.... ..-..+.++|||++++..+.|+.+.++|+.+.+.+.+++.. .....+++++
T Consensus 10 V~~~~~~~v~viD~~t~~~~~~i~~~~-~~h~~~~~s~Dgr~~yv~~rdg~vsviD~~~~~~v~~i~~G-~~~~~i~~s~ 87 (369)
T PF02239_consen 10 VVERGSGSVAVIDGATNKVVARIPTGG-APHAGLKFSPDGRYLYVANRDGTVSVIDLATGKVVATIKVG-GNPRGIAVSP 87 (369)
T ss_dssp EEEGGGTEEEEEETTT-SEEEEEE-ST-TEEEEEE-TT-SSEEEEEETTSEEEEEETTSSSEEEEEE-S-SEEEEEEE--
T ss_pred EEecCCCEEEEEECCCCeEEEEEcCCC-CceeEEEecCCCCEEEEEcCCCeEEEEECCcccEEEEEecC-CCcceEEEcC
Confidence 455667999999999999999888633 33345678999999999899999999999999988877743 3345566554
No 212
>KOG4714|consensus
Probab=98.68 E-value=2.9e-08 Score=51.35 Aligned_cols=61 Identities=21% Similarity=0.491 Sum_probs=52.5
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecC-CCCEEEEEcCCCeEEEEEcC
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTL-DSKFLLTASSDGVARLWNIE 62 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~ 62 (85)
+.++.|+.||.+-+||++....+..+...|+.+++-+.|+| ++..+++++.||.+..||..
T Consensus 193 ~~v~cgt~dg~~~l~d~rn~~~p~S~l~ahk~~i~eV~FHpk~p~~Lft~sedGslw~wdas 254 (319)
T KOG4714|consen 193 HLVCCGTDDGIVGLWDARNVAMPVSLLKAHKAEIWEVHFHPKNPEHLFTCSEDGSLWHWDAS 254 (319)
T ss_pred cEEEEecCCCeEEEEEcccccchHHHHHHhhhhhhheeccCCCchheeEecCCCcEEEEcCC
Confidence 45788999999999999988665555555888999999999 78899999999999999986
No 213
>KOG1310|consensus
Probab=98.68 E-value=7.2e-08 Score=54.39 Aligned_cols=56 Identities=21% Similarity=0.296 Sum_probs=49.1
Q ss_pred cCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCcccccccc-ccccceeEEEEeCC
Q psy7058 30 ANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYS-GHQKAITSLAFCDF 85 (85)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~ 85 (85)
+|.+-|+++.|+.+|.++++|++|-.+.|||.-..+.+-.+. +|...|.+++|-|+
T Consensus 48 GH~GCVN~LeWn~dG~lL~SGSDD~r~ivWd~~~~KllhsI~TgHtaNIFsvKFvP~ 104 (758)
T KOG1310|consen 48 GHTGCVNCLEWNADGELLASGSDDTRLIVWDPFEYKLLHSISTGHTANIFSVKFVPY 104 (758)
T ss_pred cccceecceeecCCCCEEeecCCcceEEeecchhcceeeeeecccccceeEEeeecc
Confidence 378889999999999999999999999999998777665554 78999999999875
No 214
>KOG1523|consensus
Probab=98.63 E-value=7.1e-07 Score=47.44 Aligned_cols=83 Identities=16% Similarity=0.081 Sum_probs=61.1
Q ss_pred ceeEEeeCCCcEEEeeCCCc---eeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCcccc---ccc-cccc
Q psy7058 2 GLLATTSADQTARIWNTEDF---SLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVD---KEY-SGHQ 74 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~---~~~-~~~~ 74 (85)
+.|++++.|..-++|....+ ++...+.. .+....++.|+|.+..+++|+..+.|.+|=....+-= +.+ +.+.
T Consensus 68 nrIvtcs~drnayVw~~~~~~~WkptlvLlR-iNrAAt~V~WsP~enkFAVgSgar~isVcy~E~ENdWWVsKhikkPir 146 (361)
T KOG1523|consen 68 NRIVTCSHDRNAYVWTQPSGGTWKPTLVLLR-INRAATCVKWSPKENKFAVGSGARLISVCYYEQENDWWVSKHIKKPIR 146 (361)
T ss_pred CceeEccCCCCccccccCCCCeeccceeEEE-eccceeeEeecCcCceEEeccCccEEEEEEEecccceehhhhhCCccc
Confidence 57899999999999998443 33333333 6677899999999999999999999998877644321 111 1346
Q ss_pred cceeEEEEeCC
Q psy7058 75 KAITSLAFCDF 85 (85)
Q Consensus 75 ~~v~~~~~~~~ 85 (85)
..|.++.|+|.
T Consensus 147 Stv~sldWhpn 157 (361)
T KOG1523|consen 147 STVTSLDWHPN 157 (361)
T ss_pred cceeeeeccCC
Confidence 67888888874
No 215
>KOG1517|consensus
Probab=98.62 E-value=9.4e-07 Score=53.35 Aligned_cols=63 Identities=16% Similarity=0.192 Sum_probs=49.8
Q ss_pred CceeEEeeCCCcEEEeeCCCcee---eeeeeccCCCc--EEEEEecCCCCE-EEEEcCCCeEEEEEcCCc
Q psy7058 1 MGLLATTSADQTARIWNTEDFSL---VRELGTANQRW--VWDAAFTLDSKF-LLTASSDGVARLWNIETG 64 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~---~~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~ 64 (85)
|+.+++|..||.+++||.+.... +...+. |+.. |..+.+.+.|-- +++++.+|.|++||++..
T Consensus 1221 gn~i~AGfaDGsvRvyD~R~a~~ds~v~~~R~-h~~~~~Iv~~slq~~G~~elvSgs~~G~I~~~DlR~~ 1289 (1387)
T KOG1517|consen 1221 GNIIAAGFADGSVRVYDRRMAPPDSLVCVYRE-HNDVEPIVHLSLQRQGLGELVSGSQDGDIQLLDLRMS 1289 (1387)
T ss_pred CceEEEeecCCceEEeecccCCccccceeecc-cCCcccceeEEeecCCCcceeeeccCCeEEEEecccC
Confidence 57899999999999999986543 233333 5544 899999887654 999999999999999874
No 216
>smart00320 WD40 WD40 repeats. Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.
Probab=98.60 E-value=8.2e-07 Score=31.97 Aligned_cols=37 Identities=38% Similarity=0.639 Sum_probs=30.1
Q ss_pred eeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEE
Q psy7058 23 LVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWN 60 (85)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 60 (85)
+...+.. +...+.++.|.+.+..+++++.++.+++|+
T Consensus 4 ~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~ 40 (40)
T smart00320 4 LLKTLKG-HTGPVTSVAFSPDGKYLASASDDGTIKLWD 40 (40)
T ss_pred EEEEEEe-cCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence 3344443 666799999999999999999999999986
No 217
>KOG1517|consensus
Probab=98.60 E-value=1e-06 Score=53.22 Aligned_cols=82 Identities=18% Similarity=0.306 Sum_probs=60.2
Q ss_pred eeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecC-CCCEEEEEcCCCeEEEEEcCCcc---ccccccccccc--
Q psy7058 3 LLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTL-DSKFLLTASSDGVARLWNIETGE---VDKEYSGHQKA-- 76 (85)
Q Consensus 3 ~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~---~~~~~~~~~~~-- 76 (85)
+|++++.-..|++||+...+....+......-++.+.-+. .|..++.|-.||.+++||.+... .+...+.|++.
T Consensus 1179 ~Ll~tGd~r~IRIWDa~~E~~~~diP~~s~t~vTaLS~~~~~gn~i~AGfaDGsvRvyD~R~a~~ds~v~~~R~h~~~~~ 1258 (1387)
T KOG1517|consen 1179 HLLVTGDVRSIRIWDAHKEQVVADIPYGSSTLVTALSADLVHGNIIAAGFADGSVRVYDRRMAPPDSLVCVYREHNDVEP 1258 (1387)
T ss_pred eEEecCCeeEEEEEecccceeEeecccCCCccceeecccccCCceEEEeecCCceEEeecccCCccccceeecccCCccc
Confidence 4555665789999999988888777765555566665544 47899999999999999998654 34456666655
Q ss_pred eeEEEEeC
Q psy7058 77 ITSLAFCD 84 (85)
Q Consensus 77 v~~~~~~~ 84 (85)
|..+++.+
T Consensus 1259 Iv~~slq~ 1266 (1387)
T KOG1517|consen 1259 IVHLSLQR 1266 (1387)
T ss_pred ceeEEeec
Confidence 77766654
No 218
>KOG2695|consensus
Probab=98.59 E-value=3.8e-07 Score=48.98 Aligned_cols=70 Identities=10% Similarity=0.209 Sum_probs=51.0
Q ss_pred CceeEEeeCCCcEEEeeCCCcee---eeeeeccCCCc--EEEEEecCCCCEEEEEcCCCeEEEEEcCCcccccccc
Q psy7058 1 MGLLATTSADQTARIWNTEDFSL---VRELGTANQRW--VWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYS 71 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~---~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 71 (85)
+++|.+++++++|++||.+--+. +.++.+ |... -.-+.+.+....++++++|...+||.++.+..+.+++
T Consensus 311 ~q~LmaS~M~gkikLyD~R~~K~~~~V~qYeG-HvN~~a~l~~~v~~eeg~I~s~GdDcytRiWsl~~ghLl~tip 385 (425)
T KOG2695|consen 311 QQKLMASDMTGKIKLYDLRATKCKKSVMQYEG-HVNLSAYLPAHVKEEEGSIFSVGDDCYTRIWSLDSGHLLCTIP 385 (425)
T ss_pred cceEeeccCcCceeEeeehhhhcccceeeeec-ccccccccccccccccceEEEccCeeEEEEEecccCceeeccC
Confidence 35788999999999999986665 555554 3221 1233455666677789999999999999887666554
No 219
>KOG0974|consensus
Probab=98.59 E-value=1e-06 Score=52.47 Aligned_cols=70 Identities=23% Similarity=0.503 Sum_probs=56.1
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCcccccccccc
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGH 73 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 73 (85)
|.++++.+.|..+++|++.+.+......-.|...++.+++.|. .+++++.|.+.++|+.. +..+..+.+|
T Consensus 187 g~~i~s~SdDRsiRlW~i~s~~~~~~~~fgHsaRvw~~~~~~n--~i~t~gedctcrvW~~~-~~~l~~y~~h 256 (967)
T KOG0974|consen 187 GRYIASVSDDRSIRLWPIDSREVLGCTGFGHSARVWACCFLPN--RIITVGEDCTCRVWGVN-GTQLEVYDEH 256 (967)
T ss_pred CcEEEEEecCcceeeeecccccccCcccccccceeEEEEeccc--eeEEeccceEEEEEecc-cceehhhhhh
Confidence 5789999999999999999887766333348888999999888 89999999999999664 3333355555
No 220
>PRK01742 tolB translocation protein TolB; Provisional
Probab=98.57 E-value=5.4e-07 Score=50.00 Aligned_cols=81 Identities=11% Similarity=0.124 Sum_probs=57.8
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEc--CCcccccccccccccee
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNI--ETGEVDKEYSGHQKAIT 78 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~~~~v~ 78 (85)
|++++..+.++ +.+||+.+++....... . ......|+|+|.+++.++.++...+|.+ .+++....+..+...+.
T Consensus 344 G~~ia~~~~~~-i~~~Dl~~g~~~~lt~~-~--~~~~~~~sPdG~~i~~~s~~g~~~~l~~~~~~G~~~~~l~~~~g~~~ 419 (429)
T PRK01742 344 GKTLVMINGDN-VVKQDLTSGSTEVLSST-F--LDESPSISPNGIMIIYSSTQGLGKVLQLVSADGRFKARLPGSDGQVK 419 (429)
T ss_pred CCEEEEEcCCC-EEEEECCCCCeEEecCC-C--CCCCceECCCCCEEEEEEcCCCceEEEEEECCCCceEEccCCCCCCC
Confidence 45666666554 56689887765432222 1 2346789999999999888888777775 35777777877888889
Q ss_pred EEEEeCC
Q psy7058 79 SLAFCDF 85 (85)
Q Consensus 79 ~~~~~~~ 85 (85)
..+|+|.
T Consensus 420 ~p~wsp~ 426 (429)
T PRK01742 420 FPAWSPY 426 (429)
T ss_pred CcccCCC
Confidence 9999984
No 221
>KOG4640|consensus
Probab=98.53 E-value=1.4e-06 Score=49.90 Aligned_cols=80 Identities=19% Similarity=0.209 Sum_probs=59.2
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEE-EEEecCCCCEEEEEcCCCeEEEEEcCCccccccc-cccccceeE
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTANQRWVW-DAAFTLDSKFLLTASSDGVARLWNIETGEVDKEY-SGHQKAITS 79 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~~~~v~~ 79 (85)
.++|.+..+|.+.+..+. .+.+..+.. ++..+. +++|.|||+.++.|=.||+|++.|+..+..+..+ ......|.+
T Consensus 33 dLiA~~t~~gelli~R~n-~qRlwtip~-p~~~v~~sL~W~~DGkllaVg~kdG~I~L~Dve~~~~l~~~~~s~e~~is~ 110 (665)
T KOG4640|consen 33 DLIATRTEKGELLIHRLN-WQRLWTIPI-PGENVTASLCWRPDGKLLAVGFKDGTIRLHDVEKGGRLVSFLFSVETDISK 110 (665)
T ss_pred chhheeccCCcEEEEEec-cceeEeccC-CCCccceeeeecCCCCEEEEEecCCeEEEEEccCCCceeccccccccchhe
Confidence 356788888888888877 666666664 333344 9999999999999999999999999888766552 124456666
Q ss_pred EEEe
Q psy7058 80 LAFC 83 (85)
Q Consensus 80 ~~~~ 83 (85)
+-|.
T Consensus 111 ~~w~ 114 (665)
T KOG4640|consen 111 GIWD 114 (665)
T ss_pred eecc
Confidence 6664
No 222
>KOG4532|consensus
Probab=98.51 E-value=8.6e-06 Score=42.79 Aligned_cols=84 Identities=8% Similarity=0.148 Sum_probs=58.2
Q ss_pred ceeEEeeCCCcEEEeeCCCc-eeeee-eeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCcccc-----ccccccc
Q psy7058 2 GLLATTSADQTARIWNTEDF-SLVRE-LGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVD-----KEYSGHQ 74 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-----~~~~~~~ 74 (85)
+++++.+....+..|.+... +.... ........-.+..|+.....+|++..||.+.|||++..... .+-..|.
T Consensus 171 ~~~~~Vgds~~Vf~y~id~~sey~~~~~~a~t~D~gF~~S~s~~~~~FAv~~Qdg~~~I~DVR~~~tpm~~~sstrp~hn 250 (344)
T KOG4532|consen 171 SWGSSVGDSRRVFRYAIDDESEYIENIYEAPTSDHGFYNSFSENDLQFAVVFQDGTCAIYDVRNMATPMAEISSTRPHHN 250 (344)
T ss_pred ceEEEecCCCcceEEEeCCccceeeeeEecccCCCceeeeeccCcceEEEEecCCcEEEEEecccccchhhhcccCCCCC
Confidence 46667777777777776532 22222 22223334567888888899999999999999999865322 2344688
Q ss_pred cceeEEEEeCC
Q psy7058 75 KAITSLAFCDF 85 (85)
Q Consensus 75 ~~v~~~~~~~~ 85 (85)
++++.+.|+++
T Consensus 251 Ga~R~c~Fsl~ 261 (344)
T KOG4532|consen 251 GAFRVCRFSLY 261 (344)
T ss_pred CceEEEEecCC
Confidence 99999999863
No 223
>PRK01742 tolB translocation protein TolB; Provisional
Probab=98.50 E-value=3.2e-06 Score=47.02 Aligned_cols=81 Identities=17% Similarity=0.105 Sum_probs=48.9
Q ss_pred CceeEEeeCC---CcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEE-cCCCeEEEE--EcCCccccccccccc
Q psy7058 1 MGLLATTSAD---QTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTA-SSDGVARLW--NIETGEVDKEYSGHQ 74 (85)
Q Consensus 1 g~~l~~~~~~---~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~--~~~~~~~~~~~~~~~ 74 (85)
|++|+..+.+ ..|++||+.+++...... .........|+|||+.++.+ +.++.+.+| |+..+. ...+..+.
T Consensus 215 G~~la~~s~~~~~~~i~i~dl~tg~~~~l~~--~~g~~~~~~wSPDG~~La~~~~~~g~~~Iy~~d~~~~~-~~~lt~~~ 291 (429)
T PRK01742 215 GSKLAYVSFENKKSQLVVHDLRSGARKVVAS--FRGHNGAPAFSPDGSRLAFASSKDGVLNIYVMGANGGT-PSQLTSGA 291 (429)
T ss_pred CCEEEEEEecCCCcEEEEEeCCCCceEEEec--CCCccCceeECCCCCEEEEEEecCCcEEEEEEECCCCC-eEeeccCC
Confidence 4566665533 469999998775432211 12224468999999988765 457765555 554443 33344445
Q ss_pred cceeEEEEeC
Q psy7058 75 KAITSLAFCD 84 (85)
Q Consensus 75 ~~v~~~~~~~ 84 (85)
..+....|+|
T Consensus 292 ~~~~~~~wSp 301 (429)
T PRK01742 292 GNNTEPSWSP 301 (429)
T ss_pred CCcCCEEECC
Confidence 5566777776
No 224
>KOG0644|consensus
Probab=98.43 E-value=1e-07 Score=55.98 Aligned_cols=55 Identities=29% Similarity=0.509 Sum_probs=49.4
Q ss_pred eeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcC
Q psy7058 3 LLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIE 62 (85)
Q Consensus 3 ~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 62 (85)
+++++++|..|++|.++++.++..+.+ |.+.|+.++|+|.. +.+.||++++||.+
T Consensus 246 ~iaaaS~D~vIrvWrl~~~~pvsvLrg-htgavtaiafsP~~----sss~dgt~~~wd~r 300 (1113)
T KOG0644|consen 246 MIAAASNDKVIRVWRLPDGAPVSVLRG-HTGAVTAIAFSPRA----SSSDDGTCRIWDAR 300 (1113)
T ss_pred hhhhcccCceEEEEecCCCchHHHHhc-cccceeeeccCccc----cCCCCCceEecccc
Confidence 468899999999999999999998888 88899999999866 56789999999987
No 225
>KOG4497|consensus
Probab=98.43 E-value=1e-05 Score=43.67 Aligned_cols=79 Identities=16% Similarity=0.257 Sum_probs=55.5
Q ss_pred eEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCE-EEEEcCCCeEEEEEcCCccccccccccccceeEEEE
Q psy7058 4 LATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKF-LLTASSDGVARLWNIETGEVDKEYSGHQKAITSLAF 82 (85)
Q Consensus 4 l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~~ 82 (85)
+.....++.+.+|++...+--.++.. .+..+..++|+|||+. +.+..-+-.|.+|.+.+.+.. .++..+..+..++|
T Consensus 64 lC~~yk~~~vqvwsl~Qpew~ckIde-g~agls~~~WSPdgrhiL~tseF~lriTVWSL~t~~~~-~~~~pK~~~kg~~f 141 (447)
T KOG4497|consen 64 LCVAYKDPKVQVWSLVQPEWYCKIDE-GQAGLSSISWSPDGRHILLTSEFDLRITVWSLNTQKGY-LLPHPKTNVKGYAF 141 (447)
T ss_pred eeeeeccceEEEEEeecceeEEEecc-CCCcceeeeECCCcceEeeeecceeEEEEEEeccceeE-EecccccCceeEEE
Confidence 45566788999999987777777766 6677999999999965 456667889999999765432 12212334455555
Q ss_pred eC
Q psy7058 83 CD 84 (85)
Q Consensus 83 ~~ 84 (85)
+|
T Consensus 142 ~~ 143 (447)
T KOG4497|consen 142 HP 143 (447)
T ss_pred CC
Confidence 54
No 226
>KOG1587|consensus
Probab=98.43 E-value=1e-06 Score=50.35 Aligned_cols=78 Identities=22% Similarity=0.347 Sum_probs=52.2
Q ss_pred eEEeeCCCcEEEeeCC-CceeeeeeeccCCCcEEEEEecCCC-CEEEEEcCCCeEEEEEcCCc--cccccccccccceeE
Q psy7058 4 LATTSADQTARIWNTE-DFSLVRELGTANQRWVWDAAFTLDS-KFLLTASSDGVARLWNIETG--EVDKEYSGHQKAITS 79 (85)
Q Consensus 4 l~~~~~~~~i~~~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~v~~ 79 (85)
+++++ |-.+++|.-. ...+...+.. ....+.+++|+|.. ..|+++..+|.+.+||+... .+..+........+.
T Consensus 414 fls~g-DW~vriWs~~~~~~Pl~~~~~-~~~~v~~vaWSptrpavF~~~d~~G~l~iWDLl~~~~~Pv~s~~~~~~~l~~ 491 (555)
T KOG1587|consen 414 FLSVG-DWTVRIWSEDVIASPLLSLDS-SPDYVTDVAWSPTRPAVFATVDGDGNLDIWDLLQDDEEPVLSQKVCSPALTR 491 (555)
T ss_pred eeeec-cceeEeccccCCCCcchhhhh-ccceeeeeEEcCcCceEEEEEcCCCceehhhhhccccCCcccccccccccce
Confidence 44555 8999999977 4455555554 55669999999965 56778888999999998643 333333333333444
Q ss_pred EEEe
Q psy7058 80 LAFC 83 (85)
Q Consensus 80 ~~~~ 83 (85)
+.|+
T Consensus 492 ~~~s 495 (555)
T KOG1587|consen 492 VRWS 495 (555)
T ss_pred eecC
Confidence 4444
No 227
>KOG0642|consensus
Probab=98.43 E-value=9.4e-07 Score=49.79 Aligned_cols=71 Identities=20% Similarity=0.391 Sum_probs=60.6
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCcccccccccc
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGH 73 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 73 (85)
.+.+++..|+.|+++|..++++...... +...+.++++.|.|.++.+++.|+.+++|.+....+......|
T Consensus 502 ~~~~~~hed~~Ir~~dn~~~~~l~s~~a-~~~svtslai~~ng~~l~s~s~d~sv~l~kld~k~~~~es~~~ 572 (577)
T KOG0642|consen 502 DITFTAHEDRSIRFFDNKTGKILHSMVA-HKDSVTSLAIDPNGPYLMSGSHDGSVRLWKLDVKTCVLESTAH 572 (577)
T ss_pred CeeEecccCCceecccccccccchheee-ccceecceeecCCCceEEeecCCceeehhhccchheeeccccc
Confidence 4568889999999999999999988887 7778999999999999999999999999998766555544433
No 228
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=98.42 E-value=2.2e-05 Score=44.32 Aligned_cols=81 Identities=14% Similarity=0.049 Sum_probs=65.1
Q ss_pred eeEEeeCCC-cEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEEE
Q psy7058 3 LLATTSADQ-TARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSLA 81 (85)
Q Consensus 3 ~l~~~~~~~-~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~ 81 (85)
-++.|.+|+ .+-++|..+++..+... .-+.|..+..+++|+.++.+.....+.+.|+.+++....-+...+-|..+.
T Consensus 373 ~~vigt~dgD~l~iyd~~~~e~kr~e~--~lg~I~av~vs~dGK~~vvaNdr~el~vididngnv~~idkS~~~lItdf~ 450 (668)
T COG4946 373 GDVIGTNDGDKLGIYDKDGGEVKRIEK--DLGNIEAVKVSPDGKKVVVANDRFELWVIDIDNGNVRLIDKSEYGLITDFD 450 (668)
T ss_pred ceEEeccCCceEEEEecCCceEEEeeC--CccceEEEEEcCCCcEEEEEcCceEEEEEEecCCCeeEecccccceeEEEE
Confidence 467788888 78899988776544433 345699999999999999999999999999999987766666778888898
Q ss_pred EeCC
Q psy7058 82 FCDF 85 (85)
Q Consensus 82 ~~~~ 85 (85)
|+|.
T Consensus 451 ~~~n 454 (668)
T COG4946 451 WHPN 454 (668)
T ss_pred EcCC
Confidence 8874
No 229
>KOG2139|consensus
Probab=98.35 E-value=2.1e-05 Score=42.84 Aligned_cols=54 Identities=19% Similarity=0.185 Sum_probs=41.0
Q ss_pred CCcEEEEEecCCCCEEEEEcC-CCeEEEEEcCCccccccccccccceeEEEEeCC
Q psy7058 32 QRWVWDAAFTLDSKFLLTASS-DGVARLWNIETGEVDKEYSGHQKAITSLAFCDF 85 (85)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 85 (85)
..+|.++.|++||..+++++- +..|+|||..++....-..-....+.-+.|||.
T Consensus 195 h~pVtsmqwn~dgt~l~tAS~gsssi~iWdpdtg~~~pL~~~glgg~slLkwSPd 249 (445)
T KOG2139|consen 195 HNPVTSMQWNEDGTILVTASFGSSSIMIWDPDTGQKIPLIPKGLGGFSLLKWSPD 249 (445)
T ss_pred CceeeEEEEcCCCCEEeecccCcceEEEEcCCCCCcccccccCCCceeeEEEcCC
Confidence 367999999999999988775 568999999887654333334566777888874
No 230
>KOG4227|consensus
Probab=98.35 E-value=1.5e-05 Score=43.99 Aligned_cols=83 Identities=10% Similarity=0.000 Sum_probs=61.5
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeecc-CCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCcc-ccccc--cccccce
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTA-NQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGE-VDKEY--SGHQKAI 77 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~--~~~~~~v 77 (85)
.+|.+|.+++++.+.|+.+.+.+...... ..+.+..+..+|....+++.+.++.+.+||.+... +...+ .-.....
T Consensus 118 ~~~~SG~~~~~VI~HDiEt~qsi~V~~~~~~~~~VY~m~~~P~DN~~~~~t~~~~V~~~D~Rd~~~~~~~~~~AN~~~~F 197 (609)
T KOG4227|consen 118 RFLYSGERWGTVIKHDIETKQSIYVANENNNRGDVYHMDQHPTDNTLIVVTRAKLVSFIDNRDRQNPISLVLPANSGKNF 197 (609)
T ss_pred eeEecCCCcceeEeeecccceeeeeecccCcccceeecccCCCCceEEEEecCceEEEEeccCCCCCCceeeecCCCccc
Confidence 46889999999999999998887776542 23478999999998999999999999999998654 22111 1123344
Q ss_pred eEEEEeC
Q psy7058 78 TSLAFCD 84 (85)
Q Consensus 78 ~~~~~~~ 84 (85)
+.+.|+|
T Consensus 198 ~t~~F~P 204 (609)
T KOG4227|consen 198 YTAEFHP 204 (609)
T ss_pred eeeeecC
Confidence 5566655
No 231
>KOG2066|consensus
Probab=98.35 E-value=8.9e-06 Score=47.87 Aligned_cols=81 Identities=17% Similarity=0.048 Sum_probs=60.2
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCC-----CCEEEEEcCCCeEEEEEcCCc--ccccccccc
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLD-----SKFLLTASSDGVARLWNIETG--EVDKEYSGH 73 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~ 73 (85)
|+++++|+.||++.+-.+.+.+...+.. ...++.+++++|+ ...+++|+..| +.++.-+-. +....+...
T Consensus 83 Gey~asCS~DGkv~I~sl~~~~~~~~~d--f~rpiksial~Pd~~~~~sk~fv~GG~ag-lvL~er~wlgnk~~v~l~~~ 159 (846)
T KOG2066|consen 83 GEYVASCSDDGKVVIGSLFTDDEITQYD--FKRPIKSIALHPDFSRQQSKQFVSGGMAG-LVLSERNWLGNKDSVVLSEG 159 (846)
T ss_pred CceEEEecCCCcEEEeeccCCccceeEe--cCCcceeEEeccchhhhhhhheeecCcce-EEEehhhhhcCccceeeecC
Confidence 6789999999999999888887777666 4567999999997 45688888888 666653211 112235556
Q ss_pred ccceeEEEEeC
Q psy7058 74 QKAITSLAFCD 84 (85)
Q Consensus 74 ~~~v~~~~~~~ 84 (85)
.++|.+++|..
T Consensus 160 eG~I~~i~W~g 170 (846)
T KOG2066|consen 160 EGPIHSIKWRG 170 (846)
T ss_pred ccceEEEEecC
Confidence 78999998864
No 232
>KOG1538|consensus
Probab=98.33 E-value=3.1e-06 Score=49.34 Aligned_cols=50 Identities=20% Similarity=0.376 Sum_probs=44.8
Q ss_pred cEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEEEEeC
Q psy7058 34 WVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSLAFCD 84 (85)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 84 (85)
.|..+++.|||+.++.+ .+..+.+||..+|..++++++|.+.|++++|+.
T Consensus 14 ci~d~afkPDGsqL~lA-Ag~rlliyD~ndG~llqtLKgHKDtVycVAys~ 63 (1081)
T KOG1538|consen 14 CINDIAFKPDGTQLILA-AGSRLLVYDTSDGTLLQPLKGHKDTVYCVAYAK 63 (1081)
T ss_pred chheeEECCCCceEEEe-cCCEEEEEeCCCcccccccccccceEEEEEEcc
Confidence 58899999999988776 445889999999999999999999999999975
No 233
>KOG1587|consensus
Probab=98.33 E-value=1.9e-05 Score=45.36 Aligned_cols=73 Identities=15% Similarity=0.258 Sum_probs=53.5
Q ss_pred CcEEEeeCCCceeeeeeeccCCCcEEEEEecC-CCCEEEEEcCCCeEEEEEcCCccc--ccc----ccccccceeEEEEe
Q psy7058 11 QTARIWNTEDFSLVRELGTANQRWVWDAAFTL-DSKFLLTASSDGVARLWNIETGEV--DKE----YSGHQKAITSLAFC 83 (85)
Q Consensus 11 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~--~~~----~~~~~~~v~~~~~~ 83 (85)
..+++|++........... ....+.++.++| +...++.|..+|.|.+||++.+.. ... ...|..++..+.|.
T Consensus 222 ~~~~vW~~~~p~~Pe~~~~-~~s~v~~~~f~p~~p~ll~gG~y~GqV~lWD~~~~~~~~~s~ls~~~~sh~~~v~~vvW~ 300 (555)
T KOG1587|consen 222 GVLLVWSLKNPNTPELVLE-SPSEVTCLKFCPFDPNLLAGGCYNGQVVLWDLRKGSDTPPSGLSALEVSHSEPVTAVVWL 300 (555)
T ss_pred ceEEEEecCCCCCceEEEe-cCCceeEEEeccCCcceEEeeccCceEEEEEccCCCCCCCcccccccccCCcCeEEEEEe
Confidence 3689999987733333332 566799999999 677888999999999999987654 222 22577888888775
Q ss_pred C
Q psy7058 84 D 84 (85)
Q Consensus 84 ~ 84 (85)
.
T Consensus 301 ~ 301 (555)
T KOG1587|consen 301 Q 301 (555)
T ss_pred c
Confidence 3
No 234
>KOG1334|consensus
Probab=98.25 E-value=6.5e-07 Score=49.88 Aligned_cols=61 Identities=15% Similarity=0.163 Sum_probs=53.8
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCC
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIET 63 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 63 (85)
+++++|+..|.|.+|+-.+++.++-+.+ ....|+|+.-+|--..+++.+-+.-|+||....
T Consensus 407 EyVvSGSDCGhIFiW~K~t~eii~~Meg-Dr~VVNCLEpHP~~PvLAsSGid~DVKIWTP~~ 467 (559)
T KOG1334|consen 407 EYVVSGSDCGHIFIWDKKTGEIIRFMEG-DRHVVNCLEPHPHLPVLASSGIDHDVKIWTPLT 467 (559)
T ss_pred ceEEecCccceEEEEecchhHHHHHhhc-ccceEeccCCCCCCchhhccCCccceeeecCCc
Confidence 5789999999999999999998888777 444899999999999999999999999998743
No 235
>KOG2321|consensus
Probab=98.24 E-value=5.5e-06 Score=47.31 Aligned_cols=80 Identities=8% Similarity=0.123 Sum_probs=59.8
Q ss_pred eeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCC--CCEEEEEcCCCeEEEEEcCCccccccccccccceeEE
Q psy7058 3 LLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLD--SKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSL 80 (85)
Q Consensus 3 ~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~ 80 (85)
.++.|..+|.+++||++..++...-...+.-+|..+.|.+. ...+++ .....++|||-.+++....+. ....++.+
T Consensus 242 ~~aVGts~G~v~iyDLRa~~pl~~kdh~~e~pi~~l~~~~~~~q~~v~S-~Dk~~~kiWd~~~Gk~~asiE-pt~~lND~ 319 (703)
T KOG2321|consen 242 HVAVGTSTGSVLIYDLRASKPLLVKDHGYELPIKKLDWQDTDQQNKVVS-MDKRILKIWDECTGKPMASIE-PTSDLNDF 319 (703)
T ss_pred eEEeeccCCcEEEEEcccCCceeecccCCccceeeecccccCCCceEEe-cchHHhhhcccccCCceeecc-ccCCcCce
Confidence 47889999999999999988887766656778999999875 333444 456689999999998776665 33446655
Q ss_pred EEeC
Q psy7058 81 AFCD 84 (85)
Q Consensus 81 ~~~~ 84 (85)
++-|
T Consensus 320 C~~p 323 (703)
T KOG2321|consen 320 CFVP 323 (703)
T ss_pred eeec
Confidence 5543
No 236
>KOG1240|consensus
Probab=98.24 E-value=2.4e-05 Score=48.21 Aligned_cols=61 Identities=18% Similarity=0.311 Sum_probs=47.0
Q ss_pred ceeEEeeCCCcEEEeeCCCcee----e---eeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCC
Q psy7058 2 GLLATTSADQTARIWNTEDFSL----V---RELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIET 63 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~----~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 63 (85)
.++++|+.||++++||.+.... . .++.. ....+..+..-+.+..++.++.||.|++.++.-
T Consensus 1062 s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~-~~sr~~~vt~~~~~~~~Av~t~DG~v~~~~id~ 1129 (1431)
T KOG1240|consen 1062 SLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSP-EGSRVEKVTMCGNGDQFAVSTKDGSVRVLRIDH 1129 (1431)
T ss_pred ceEEEecCCceEEEeeehhhhcCcceeeeeEEEec-cCCceEEEEeccCCCeEEEEcCCCeEEEEEccc
Confidence 6789999999999999874221 1 11221 345688888888999999999999999998864
No 237
>KOG2695|consensus
Probab=98.24 E-value=4.4e-06 Score=45.14 Aligned_cols=72 Identities=13% Similarity=0.141 Sum_probs=54.1
Q ss_pred CceeEEeeCCCcEEEeeCCCc-----eeeeeeeccCCCcEEEEEecC-CCCEEEEEcCCCeEEEEEcCCccc---ccccc
Q psy7058 1 MGLLATTSADQTARIWNTEDF-----SLVRELGTANQRWVWDAAFTL-DSKFLLTASSDGVARLWNIETGEV---DKEYS 71 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~-----~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~---~~~~~ 71 (85)
++++..|.++|.|...|++.. .+...+. |...++++..-. +++++.+.+.+|.|.+||.+.-++ +.++.
T Consensus 264 ~nLv~~GcRngeI~~iDLR~rnqG~~~~a~rly--h~Ssvtslq~Lq~s~q~LmaS~M~gkikLyD~R~~K~~~~V~qYe 341 (425)
T KOG2695|consen 264 DNLVFNGCRNGEIFVIDLRCRNQGNGWCAQRLY--HDSSVTSLQILQFSQQKLMASDMTGKIKLYDLRATKCKKSVMQYE 341 (425)
T ss_pred CCeeEecccCCcEEEEEeeecccCCCcceEEEE--cCcchhhhhhhccccceEeeccCcCceeEeeehhhhcccceeeee
Confidence 367889999999999999864 2333333 666677776544 788888999999999999987666 66676
Q ss_pred ccc
Q psy7058 72 GHQ 74 (85)
Q Consensus 72 ~~~ 74 (85)
+|-
T Consensus 342 GHv 344 (425)
T KOG2695|consen 342 GHV 344 (425)
T ss_pred ccc
Confidence 663
No 238
>KOG1645|consensus
Probab=98.23 E-value=2e-05 Score=43.35 Aligned_cols=61 Identities=18% Similarity=0.379 Sum_probs=51.0
Q ss_pred eeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCC-CEEEEEcCCCeEEEEEcCCcc
Q psy7058 3 LLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDS-KFLLTASSDGVARLWNIETGE 65 (85)
Q Consensus 3 ~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~ 65 (85)
++..++.+..|++.|+++...+..+.. + ..+++.+|..+. +++..|..+|.|.+||+++.+
T Consensus 208 Ll~~asl~nkiki~dlet~~~vssy~a-~-~~~wSC~wDlde~h~IYaGl~nG~VlvyD~R~~~ 269 (463)
T KOG1645|consen 208 LLGLASLGNKIKIMDLETSCVVSSYIA-Y-NQIWSCCWDLDERHVIYAGLQNGMVLVYDMRQPE 269 (463)
T ss_pred eeeeeccCceEEEEecccceeeeheec-c-CCceeeeeccCCcceeEEeccCceEEEEEccCCC
Confidence 567888999999999999888887776 4 679999999965 556778889999999998664
No 239
>PRK03629 tolB translocation protein TolB; Provisional
Probab=98.22 E-value=2e-05 Score=44.02 Aligned_cols=81 Identities=11% Similarity=0.117 Sum_probs=53.5
Q ss_pred CceeEEeeCC---CcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCe---EEEEEcCCccccccccccc
Q psy7058 1 MGLLATTSAD---QTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGV---ARLWNIETGEVDKEYSGHQ 74 (85)
Q Consensus 1 g~~l~~~~~~---~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---i~~~~~~~~~~~~~~~~~~ 74 (85)
|++++..+.+ ..+.+||+.+++... +.... ......|+|||..++..+.++. +.++++ ++.....+..+.
T Consensus 342 G~~Ia~~~~~~g~~~I~~~dl~~g~~~~-Lt~~~--~~~~p~~SpDG~~i~~~s~~~~~~~l~~~~~-~G~~~~~l~~~~ 417 (429)
T PRK03629 342 GKFMVMVSSNGGQQHIAKQDLATGGVQV-LTDTF--LDETPSIAPNGTMVIYSSSQGMGSVLNLVST-DGRFKARLPATD 417 (429)
T ss_pred CCEEEEEEccCCCceEEEEECCCCCeEE-eCCCC--CCCCceECCCCCEEEEEEcCCCceEEEEEEC-CCCCeEECccCC
Confidence 3455554433 357888988775432 22211 2346789999999888776653 666776 455566677777
Q ss_pred cceeEEEEeCC
Q psy7058 75 KAITSLAFCDF 85 (85)
Q Consensus 75 ~~v~~~~~~~~ 85 (85)
..+...+|+|.
T Consensus 418 ~~~~~p~Wsp~ 428 (429)
T PRK03629 418 GQVKFPAWSPY 428 (429)
T ss_pred CCcCCcccCCC
Confidence 88999999984
No 240
>KOG4547|consensus
Probab=98.21 E-value=5.1e-05 Score=43.21 Aligned_cols=82 Identities=7% Similarity=0.043 Sum_probs=70.0
Q ss_pred eeEEeeCCCcEEEeeCCCceeeeeee-ccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEEE
Q psy7058 3 LLATTSADQTARIWNTEDFSLVRELG-TANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSLA 81 (85)
Q Consensus 3 ~l~~~~~~~~i~~~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~ 81 (85)
.++-|...|.+.+|++..++....+. +.|.+.++++.++.+-..+.+++.|..+..|+.+..+......+....+.++.
T Consensus 72 ~lvlgt~~g~v~~ys~~~g~it~~~st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~~~~~~~~~~~~~~~sl~ 151 (541)
T KOG4547|consen 72 MLVLGTPQGSVLLYSVAGGEITAKLSTDKHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEKVIIRIWKEQKPLVSSLC 151 (541)
T ss_pred EEEeecCCccEEEEEecCCeEEEEEecCCCCCcceeeecccccCceEecCCceeEEEEecccceeeeeeccCCCccceEE
Confidence 46777888999999999999988887 45778899999999888999999999999999999888888877777777776
Q ss_pred EeC
Q psy7058 82 FCD 84 (85)
Q Consensus 82 ~~~ 84 (85)
.+|
T Consensus 152 is~ 154 (541)
T KOG4547|consen 152 ISP 154 (541)
T ss_pred EcC
Confidence 665
No 241
>PRK02889 tolB translocation protein TolB; Provisional
Probab=98.21 E-value=5.6e-05 Score=42.26 Aligned_cols=81 Identities=14% Similarity=0.037 Sum_probs=47.6
Q ss_pred CceeEEeeC---CCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEE-EEcCCCeEEEEE--cCCccccccccccc
Q psy7058 1 MGLLATTSA---DQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL-TASSDGVARLWN--IETGEVDKEYSGHQ 74 (85)
Q Consensus 1 g~~l~~~~~---~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~--~~~~~~~~~~~~~~ 74 (85)
|+.|+..+. ...|++||+.+++.... .. .........|+|||+.++ +.+.++...+|. ...+. ...+..+.
T Consensus 207 G~~la~~s~~~~~~~I~~~dl~~g~~~~l-~~-~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~~-~~~lt~~~ 283 (427)
T PRK02889 207 GTKLAYVSFESKKPVVYVHDLATGRRRVV-AN-FKGSNSAPAWSPDGRTLAVALSRDGNSQIYTVNADGSG-LRRLTQSS 283 (427)
T ss_pred CCEEEEEEccCCCcEEEEEECCCCCEEEe-ec-CCCCccceEECCCCCEEEEEEccCCCceEEEEECCCCC-cEECCCCC
Confidence 355655443 24599999988765432 22 233456889999998876 556777666665 43333 33333333
Q ss_pred cceeEEEEeC
Q psy7058 75 KAITSLAFCD 84 (85)
Q Consensus 75 ~~v~~~~~~~ 84 (85)
.......|+|
T Consensus 284 ~~~~~~~wSp 293 (427)
T PRK02889 284 GIDTEPFFSP 293 (427)
T ss_pred CCCcCeEEcC
Confidence 3344566765
No 242
>KOG1064|consensus
Probab=98.20 E-value=7.5e-06 Score=52.13 Aligned_cols=80 Identities=21% Similarity=0.258 Sum_probs=67.8
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEEE
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSLA 81 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~ 81 (85)
.++++|+.|+.+++|....+..+...+...+..++.+.|+.+|..+..+..||.+.+|.+. .++....+.|....+++.
T Consensus 2221 ~~Yltgs~dgsv~~~~w~~~~~v~~~rt~g~s~vtr~~f~~qGnk~~i~d~dg~l~l~q~~-pk~~~s~qchnk~~~Df~ 2299 (2439)
T KOG1064|consen 2221 PYYLTGSQDGSVRMFEWGHGQQVVCFRTAGNSRVTRSRFNHQGNKFGIVDGDGDLSLWQAS-PKPYTSWQCHNKALSDFR 2299 (2439)
T ss_pred ceEEecCCCceEEEEeccCCCeEEEeeccCcchhhhhhhcccCCceeeeccCCceeecccC-CcceeccccCCcccccee
Confidence 4679999999999999999988888877566789999999999999999999999999997 566666666777766666
Q ss_pred E
Q psy7058 82 F 82 (85)
Q Consensus 82 ~ 82 (85)
|
T Consensus 2300 F 2300 (2439)
T KOG1064|consen 2300 F 2300 (2439)
T ss_pred e
Confidence 5
No 243
>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain
Probab=98.20 E-value=2.3e-05 Score=30.63 Aligned_cols=34 Identities=9% Similarity=0.122 Sum_probs=29.5
Q ss_pred CCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccc
Q psy7058 32 QRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEV 66 (85)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 66 (85)
...+..+.|+|....++.+..+|.|.++.+ +++.
T Consensus 11 ~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl-~~qr 44 (47)
T PF12894_consen 11 PSRVSCMSWCPTMDLIALGTEDGEVLVYRL-NWQR 44 (47)
T ss_pred CCcEEEEEECCCCCEEEEEECCCeEEEEEC-CCcC
Confidence 456899999999999999999999999998 4443
No 244
>KOG0280|consensus
Probab=98.19 E-value=6.2e-05 Score=40.07 Aligned_cols=81 Identities=15% Similarity=0.226 Sum_probs=53.1
Q ss_pred eeEEeeCCCcEEEeeCCCcee--eeeeeccCCCcEEEEEecC-CCCEEEEEcCCCeEEEEEcC-Ccccccc-ccccccce
Q psy7058 3 LLATTSADQTARIWNTEDFSL--VRELGTANQRWVWDAAFTL-DSKFLLTASSDGVARLWNIE-TGEVDKE-YSGHQKAI 77 (85)
Q Consensus 3 ~l~~~~~~~~i~~~d~~~~~~--~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~-~~~~~~~-~~~~~~~v 77 (85)
.++++..++.+.+-+...+.. ....+. |..+++...|+. +...+.+|++|+.+..||++ .++.+.. .+.|...|
T Consensus 135 ~i~vs~s~G~~~~v~~t~~~le~vq~wk~-He~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~~~i~~n~kvH~~GV 213 (339)
T KOG0280|consen 135 KIFVSDSRGSISGVYETEMVLEKVQTWKV-HEFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPKTFIWHNSKVHTSGV 213 (339)
T ss_pred eEEEEcCCCcEEEEecceeeeeecccccc-cceeeeeeecccCCCceEEecCCCceEEEEEecCCcceeeecceeeecce
Confidence 456666667766433332222 223344 777788888877 45678899999999999999 3344433 45677788
Q ss_pred eEEEEeC
Q psy7058 78 TSLAFCD 84 (85)
Q Consensus 78 ~~~~~~~ 84 (85)
.++.-+|
T Consensus 214 ~SI~ss~ 220 (339)
T KOG0280|consen 214 VSIYSSP 220 (339)
T ss_pred EEEecCC
Confidence 7776655
No 245
>PRK05137 tolB translocation protein TolB; Provisional
Probab=98.16 E-value=8.5e-05 Score=41.60 Aligned_cols=81 Identities=12% Similarity=0.132 Sum_probs=49.4
Q ss_pred CceeEEee---CCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEE-EEcCCC--eEEEEEcCCccccccccccc
Q psy7058 1 MGLLATTS---ADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL-TASSDG--VARLWNIETGEVDKEYSGHQ 74 (85)
Q Consensus 1 g~~l~~~~---~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~i~~~~~~~~~~~~~~~~~~ 74 (85)
|+.|+..+ .+..|++||+.+++... +.. ....+....|+|||+.++ +.+.++ .|+++|+..+.. ..+..+.
T Consensus 213 G~~lay~s~~~g~~~i~~~dl~~g~~~~-l~~-~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~~~-~~Lt~~~ 289 (435)
T PRK05137 213 RQEITYMSYANGRPRVYLLDLETGQREL-VGN-FPGMTFAPRFSPDGRKVVMSLSQGGNTDIYTMDLRSGTT-TRLTDSP 289 (435)
T ss_pred CCEEEEEEecCCCCEEEEEECCCCcEEE-eec-CCCcccCcEECCCCCEEEEEEecCCCceEEEEECCCCce-EEccCCC
Confidence 34555544 24679999998776533 222 344567889999998765 445554 477778876543 2333333
Q ss_pred cceeEEEEeC
Q psy7058 75 KAITSLAFCD 84 (85)
Q Consensus 75 ~~v~~~~~~~ 84 (85)
.......|+|
T Consensus 290 ~~~~~~~~sp 299 (435)
T PRK05137 290 AIDTSPSYSP 299 (435)
T ss_pred CccCceeEcC
Confidence 4445566665
No 246
>KOG2079|consensus
Probab=98.15 E-value=7.2e-06 Score=49.68 Aligned_cols=78 Identities=17% Similarity=0.204 Sum_probs=57.6
Q ss_pred eeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEE
Q psy7058 3 LLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSL 80 (85)
Q Consensus 3 ~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~ 80 (85)
+++.|+..|.+...|....-...........++.+++++.+|+.++.|-.+|.|.+||+..++.+..+..+..+...+
T Consensus 101 ~ivi~Ts~ghvl~~d~~~nL~~~~~ne~v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k~l~~i~e~~ap~t~v 178 (1206)
T KOG2079|consen 101 PIVIGTSHGHVLLSDMTGNLGPLHQNERVQGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAKILKVITEHGAPVTGV 178 (1206)
T ss_pred eEEEEcCchhhhhhhhhcccchhhcCCccCCcceeeEecCCCceeccccCCCcEEEEEccCCcceeeeeecCCccceE
Confidence 467778888888888664211111112245789999999999999999999999999999888877777666555544
No 247
>KOG4714|consensus
Probab=98.14 E-value=3.9e-06 Score=43.79 Aligned_cols=52 Identities=15% Similarity=0.196 Sum_probs=42.3
Q ss_pred cEEEEEecC-CCCEEEEEcCCCeEEEEEcCCcc-ccccccccccceeEEEEeCC
Q psy7058 34 WVWDAAFTL-DSKFLLTASSDGVARLWNIETGE-VDKEYSGHQKAITSLAFCDF 85 (85)
Q Consensus 34 ~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~ 85 (85)
.+.+++-+| +.+.++.|+.+|.+.+||.++.. +...+..|+.+++.+-|+|.
T Consensus 181 ~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~~p~S~l~ahk~~i~eV~FHpk 234 (319)
T KOG4714|consen 181 AVTALCSHPAQQHLVCCGTDDGIVGLWDARNVAMPVSLLKAHKAEIWEVHFHPK 234 (319)
T ss_pred cchhhhCCcccccEEEEecCCCeEEEEEcccccchHHHHHHhhhhhhheeccCC
Confidence 388888888 45667888999999999998764 44567789999999999873
No 248
>PRK04922 tolB translocation protein TolB; Provisional
Probab=98.10 E-value=0.00012 Score=41.02 Aligned_cols=81 Identities=15% Similarity=0.050 Sum_probs=48.6
Q ss_pred CceeEEeeC---CCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEE-EEcCCC--eEEEEEcCCccccccccccc
Q psy7058 1 MGLLATTSA---DQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL-TASSDG--VARLWNIETGEVDKEYSGHQ 74 (85)
Q Consensus 1 g~~l~~~~~---~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~i~~~~~~~~~~~~~~~~~~ 74 (85)
|+.|+..+. +..|++||+.+++..... . .........|+|+|+.++ +.+.++ .|++||+..++.. .+..+.
T Consensus 215 g~~la~~s~~~~~~~l~~~dl~~g~~~~l~-~-~~g~~~~~~~SpDG~~l~~~~s~~g~~~Iy~~d~~~g~~~-~lt~~~ 291 (433)
T PRK04922 215 GKKLAYVSFERGRSAIYVQDLATGQRELVA-S-FRGINGAPSFSPDGRRLALTLSRDGNPEIYVMDLGSRQLT-RLTNHF 291 (433)
T ss_pred CCEEEEEecCCCCcEEEEEECCCCCEEEec-c-CCCCccCceECCCCCEEEEEEeCCCCceEEEEECCCCCeE-ECccCC
Confidence 345665543 346999999877653322 2 233345789999998765 444444 6999998776532 233333
Q ss_pred cceeEEEEeC
Q psy7058 75 KAITSLAFCD 84 (85)
Q Consensus 75 ~~v~~~~~~~ 84 (85)
......+|+|
T Consensus 292 ~~~~~~~~sp 301 (433)
T PRK04922 292 GIDTEPTWAP 301 (433)
T ss_pred CCccceEECC
Confidence 3344566665
No 249
>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal
Probab=98.10 E-value=4.2e-05 Score=40.29 Aligned_cols=46 Identities=15% Similarity=0.373 Sum_probs=38.7
Q ss_pred CCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccc
Q psy7058 31 NQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKA 76 (85)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 76 (85)
....|..+.++|||..+++...+|.|.+|++++.+..+....++.+
T Consensus 228 ~~d~i~kmSlSPdg~~La~ih~sG~lsLW~iPsL~~~~~W~~~eqP 273 (282)
T PF15492_consen 228 EQDGIFKMSLSPDGSLLACIHFSGSLSLWEIPSLRLQRSWKQDEQP 273 (282)
T ss_pred CCCceEEEEECCCCCEEEEEEcCCeEEEEecCcchhhcccchhhCC
Confidence 4567899999999999999999999999999988877776644433
No 250
>PRK03629 tolB translocation protein TolB; Provisional
Probab=98.10 E-value=0.00012 Score=41.00 Aligned_cols=81 Identities=16% Similarity=0.102 Sum_probs=48.6
Q ss_pred CceeEEee---CCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEE-cCCC--eEEEEEcCCccccccccccc
Q psy7058 1 MGLLATTS---ADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTA-SSDG--VARLWNIETGEVDKEYSGHQ 74 (85)
Q Consensus 1 g~~l~~~~---~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~i~~~~~~~~~~~~~~~~~~ 74 (85)
|+.|+..+ .+..+++||+.+++...... .........|+|||+.++.. +.++ .|++||+.+++...... +.
T Consensus 210 G~~la~~s~~~g~~~i~i~dl~~G~~~~l~~--~~~~~~~~~~SPDG~~La~~~~~~g~~~I~~~d~~tg~~~~lt~-~~ 286 (429)
T PRK03629 210 GSKLAYVTFESGRSALVIQTLANGAVRQVAS--FPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTD-GR 286 (429)
T ss_pred CCEEEEEEecCCCcEEEEEECCCCCeEEccC--CCCCcCCeEECCCCCEEEEEEcCCCCcEEEEEECCCCCEEEccC-CC
Confidence 34555432 23568899988775433221 22234568999999987754 4444 58889998765433222 33
Q ss_pred cceeEEEEeC
Q psy7058 75 KAITSLAFCD 84 (85)
Q Consensus 75 ~~v~~~~~~~ 84 (85)
..+....|+|
T Consensus 287 ~~~~~~~wSP 296 (429)
T PRK03629 287 SNNTEPTWFP 296 (429)
T ss_pred CCcCceEECC
Confidence 4556677776
No 251
>KOG1912|consensus
Probab=98.08 E-value=3.1e-05 Score=45.97 Aligned_cols=82 Identities=22% Similarity=0.272 Sum_probs=64.6
Q ss_pred eeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecC---CC-CEEEEEcCCCeEEEEEcCCcccccccccccccee
Q psy7058 3 LLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTL---DS-KFLLTASSDGVARLWNIETGEVDKEYSGHQKAIT 78 (85)
Q Consensus 3 ~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~ 78 (85)
.++++...|.|.+||...+.....+.. +..++..++|-+ +. ..++.-.....+-+|+..+|..+..+........
T Consensus 81 liAsaD~~GrIil~d~~~~s~~~~l~~-~~~~~qdl~W~~~rd~Srd~LlaIh~ss~lvLwntdtG~k~Wk~~ys~~iLs 159 (1062)
T KOG1912|consen 81 LIASADISGRIILVDFVLASVINWLSH-SNDSVQDLCWVPARDDSRDVLLAIHGSSTLVLWNTDTGEKFWKYDYSHEILS 159 (1062)
T ss_pred eEEeccccCcEEEEEehhhhhhhhhcC-CCcchhheeeeeccCcchheeEEecCCcEEEEEEccCCceeeccccCCccee
Confidence 467888899999999998777776665 667789999876 23 4566667778999999999998888876667777
Q ss_pred EEEEeCC
Q psy7058 79 SLAFCDF 85 (85)
Q Consensus 79 ~~~~~~~ 85 (85)
|+.+.|+
T Consensus 160 ~f~~DPf 166 (1062)
T KOG1912|consen 160 CFRVDPF 166 (1062)
T ss_pred eeeeCCC
Confidence 7777664
No 252
>KOG1240|consensus
Probab=98.08 E-value=4.4e-05 Score=47.17 Aligned_cols=81 Identities=15% Similarity=0.193 Sum_probs=59.0
Q ss_pred eeEEeeCCCcEEEeeCCCceeeeeeecc-CCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCcccccccc-ccccceeEE
Q psy7058 3 LLATTSADQTARIWNTEDFSLVRELGTA-NQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYS-GHQKAITSL 80 (85)
Q Consensus 3 ~l~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~v~~~ 80 (85)
.|+.+...+.+..||+++.....+++.. ..+.+++++.+|.+.+++.|...|.+.+||++-..++.... .+..+++.+
T Consensus 1165 ~lvy~T~~~~iv~~D~r~~~~~w~lk~~~~hG~vTSi~idp~~~WlviGts~G~l~lWDLRF~~~i~sw~~P~~~~i~~v 1244 (1431)
T KOG1240|consen 1165 VLVYATDLSRIVSWDTRMRHDAWRLKNQLRHGLVTSIVIDPWCNWLVIGTSRGQLVLWDLRFRVPILSWEHPARAPIRHV 1244 (1431)
T ss_pred eEEEEEeccceEEecchhhhhHHhhhcCccccceeEEEecCCceEEEEecCCceEEEEEeecCceeecccCcccCCcceE
Confidence 4566667788999999877655554432 34679999999999999999999999999998776655443 123455555
Q ss_pred EEe
Q psy7058 81 AFC 83 (85)
Q Consensus 81 ~~~ 83 (85)
..+
T Consensus 1245 ~~~ 1247 (1431)
T KOG1240|consen 1245 WLC 1247 (1431)
T ss_pred Eee
Confidence 444
No 253
>KOG3621|consensus
Probab=98.08 E-value=2.5e-05 Score=45.51 Aligned_cols=85 Identities=11% Similarity=0.159 Sum_probs=60.3
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccc-cc-----cccc
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDK-EY-----SGHQ 74 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~-----~~~~ 74 (85)
+++++.|+..|.+++|+-..++............+....++++..+++.++..+.|.++.++...+.. .+ +.|.
T Consensus 45 ~~~l~~GsS~G~lyl~~R~~~~~~~~~~~~~~~~~~~~~vs~~e~lvAagt~~g~V~v~ql~~~~p~~~~~~t~~d~~~~ 124 (726)
T KOG3621|consen 45 EEYLAMGSSAGSVYLYNRHTGEMRKLKNEGATGITCVRSVSSVEYLVAAGTASGRVSVFQLNKELPRDLDYVTPCDKSHK 124 (726)
T ss_pred CceEEEecccceEEEEecCchhhhcccccCccceEEEEEecchhHhhhhhcCCceEEeehhhccCCCcceeeccccccCC
Confidence 36789999999999999776554433332233445566778888889999999999999987653321 11 1367
Q ss_pred cceeEEEEeCC
Q psy7058 75 KAITSLAFCDF 85 (85)
Q Consensus 75 ~~v~~~~~~~~ 85 (85)
..|++++|++.
T Consensus 125 ~rVTal~Ws~~ 135 (726)
T KOG3621|consen 125 CRVTALEWSKN 135 (726)
T ss_pred ceEEEEEeccc
Confidence 88999999863
No 254
>PRK05137 tolB translocation protein TolB; Provisional
Probab=98.07 E-value=0.0002 Score=40.20 Aligned_cols=71 Identities=15% Similarity=0.163 Sum_probs=47.2
Q ss_pred CcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcC---CCeEEEEEcCCccccccccccccceeEEEEeC
Q psy7058 11 QTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASS---DGVARLWNIETGEVDKEYSGHQKAITSLAFCD 84 (85)
Q Consensus 11 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 84 (85)
..|.++|...... ..+.. +...+....|+|||+.++..+. +..|++||+..++.. .+......+...+|+|
T Consensus 182 ~~l~~~d~dg~~~-~~lt~-~~~~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g~~~-~l~~~~g~~~~~~~SP 255 (435)
T PRK05137 182 KRLAIMDQDGANV-RYLTD-GSSLVLTPRFSPNRQEITYMSYANGRPRVYLLDLETGQRE-LVGNFPGMTFAPRFSP 255 (435)
T ss_pred eEEEEECCCCCCc-EEEec-CCCCeEeeEECCCCCEEEEEEecCCCCEEEEEECCCCcEE-EeecCCCcccCcEECC
Confidence 3688888764443 33333 5567899999999998877653 468999999876542 2333344555666666
No 255
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=98.06 E-value=0.00022 Score=38.50 Aligned_cols=63 Identities=16% Similarity=0.370 Sum_probs=41.0
Q ss_pred CceeEEeeC-CCcEEEeeCCC--ce--eeeeeec-----cCCCcEEEEEecCCCCEEEEEcC-CCeEEEEEcCC
Q psy7058 1 MGLLATTSA-DQTARIWNTED--FS--LVRELGT-----ANQRWVWDAAFTLDSKFLLTASS-DGVARLWNIET 63 (85)
Q Consensus 1 g~~l~~~~~-~~~i~~~d~~~--~~--~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~ 63 (85)
|++++++.. ++.+.+|++.. ++ ....+.. ........+.++|++++++++.. ++.|.+|++..
T Consensus 186 g~~lyv~~~~~~~v~v~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~i~~~pdg~~lyv~~~~~~~I~v~~i~~ 259 (330)
T PRK11028 186 QQYAYCVNELNSSVDVWQLKDPHGEIECVQTLDMMPADFSDTRWAADIHITPDGRHLYACDRTASLISVFSVSE 259 (330)
T ss_pred CCEEEEEecCCCEEEEEEEeCCCCCEEEEEEEecCCCcCCCCccceeEEECCCCCEEEEecCCCCeEEEEEEeC
Confidence 356666655 88999999873 22 2222221 01112346889999999888754 68999999854
No 256
>KOG1275|consensus
Probab=98.05 E-value=1.4e-05 Score=47.95 Aligned_cols=67 Identities=10% Similarity=0.165 Sum_probs=55.5
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcC---------CCeEEEEEcCCcccccccc
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASS---------DGVARLWNIETGEVDKEYS 71 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~i~~~~~~~~~~~~~~~ 71 (85)
+.+.+|...|++.+-|.++.+...++.. |.+.+.++.. +|..+++++. |.-+++||++..+.+..+.
T Consensus 188 r~lf~G~t~G~V~LrD~~s~~~iht~~a-Hs~siSDfDv--~GNlLitCG~S~R~~~l~~D~FvkVYDLRmmral~PI~ 263 (1118)
T KOG1275|consen 188 RNLFCGDTRGTVFLRDPNSFETIHTFDA-HSGSISDFDV--QGNLLITCGYSMRRYNLAMDPFVKVYDLRMMRALSPIQ 263 (1118)
T ss_pred cEEEeecccceEEeecCCcCceeeeeec-cccceeeeec--cCCeEEEeecccccccccccchhhhhhhhhhhccCCcc
Confidence 5678899999999999999999999988 8888888766 6889988874 4468999999887665554
No 257
>KOG1334|consensus
Probab=98.04 E-value=1.5e-05 Score=44.80 Aligned_cols=84 Identities=24% Similarity=0.280 Sum_probs=61.7
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecC--CCCEEEEEcCCCeEEEEEcCCcc-c--ccccccccc
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTL--DSKFLLTASSDGVARLWNIETGE-V--DKEYSGHQK 75 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~i~~~~~~~~~-~--~~~~~~~~~ 75 (85)
|..|++++.|..+.+||+..+.....+..+|...+.-..|-| +...+++.+.||.+++-.+.... + ...+..|.+
T Consensus 154 Gd~l~SgSDD~~vv~WdW~~~~~~l~f~SGH~~NvfQaKFiP~s~d~ti~~~s~dgqvr~s~i~~t~~~e~t~rl~~h~g 233 (559)
T KOG1334|consen 154 GDVLASGSDDLQVVVWDWVSGSPKLSFESGHCNNVFQAKFIPFSGDRTIVTSSRDGQVRVSEILETGYVENTKRLAPHEG 233 (559)
T ss_pred CceeeccCccceEEeehhhccCcccccccccccchhhhhccCCCCCcCceeccccCceeeeeeccccceecceecccccC
Confidence 567999999999999999999888888776766666666766 34568888999999988765432 2 223445777
Q ss_pred ceeEEEEeC
Q psy7058 76 AITSLAFCD 84 (85)
Q Consensus 76 ~v~~~~~~~ 84 (85)
+|+.++.-|
T Consensus 234 ~vhklav~p 242 (559)
T KOG1334|consen 234 PVHKLAVEP 242 (559)
T ss_pred ccceeeecC
Confidence 777666533
No 258
>KOG2315|consensus
Probab=98.03 E-value=6.2e-05 Score=42.88 Aligned_cols=59 Identities=14% Similarity=0.374 Sum_probs=43.9
Q ss_pred CceeEEee---CCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcC------CCeEEEEEcC
Q psy7058 1 MGLLATTS---ADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASS------DGVARLWNIE 62 (85)
Q Consensus 1 g~~l~~~~---~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~i~~~~~~ 62 (85)
|+.++.++ ..|.+-+||+.+.+.+..+.. .. -+-..|+|||.+++++.. |..++||+..
T Consensus 323 g~ii~lAGFGNL~G~mEvwDv~n~K~i~~~~a-~~--tt~~eW~PdGe~flTATTaPRlrvdNg~Kiwhyt 390 (566)
T KOG2315|consen 323 GNIILLAGFGNLPGDMEVWDVPNRKLIAKFKA-AN--TTVFEWSPDGEYFLTATTAPRLRVDNGIKIWHYT 390 (566)
T ss_pred CCEEEEeecCCCCCceEEEeccchhhcccccc-CC--ceEEEEcCCCcEEEEEeccccEEecCCeEEEEec
Confidence 34555444 347799999999888777765 22 467889999999998764 5678999885
No 259
>KOG2314|consensus
Probab=98.03 E-value=3.9e-05 Score=43.96 Aligned_cols=73 Identities=12% Similarity=0.096 Sum_probs=51.3
Q ss_pred CcEEEeeCCCceeeeeeec--cCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEEEEeC
Q psy7058 11 QTARIWNTEDFSLVRELGT--ANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSLAFCD 84 (85)
Q Consensus 11 ~~i~~~d~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 84 (85)
..+.+||+.+|...+.+.. .......-..||.|++++|-... ..|.||+..+...+-.-...-..|...+|+|
T Consensus 282 ~~l~IWDI~tG~lkrsF~~~~~~~~~WP~frWS~DdKy~Arm~~-~sisIyEtpsf~lld~Kslki~gIr~FswsP 356 (698)
T KOG2314|consen 282 QQLIIWDIATGLLKRSFPVIKSPYLKWPIFRWSHDDKYFARMTG-NSISIYETPSFMLLDKKSLKISGIRDFSWSP 356 (698)
T ss_pred ceEEEEEccccchhcceeccCCCccccceEEeccCCceeEEecc-ceEEEEecCceeeecccccCCccccCcccCC
Confidence 5689999999988877765 12223456789999999987766 4788898876554433333445677777776
No 260
>KOG1963|consensus
Probab=98.03 E-value=7.7e-05 Score=44.25 Aligned_cols=63 Identities=13% Similarity=0.027 Sum_probs=52.2
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCcc
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGE 65 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 65 (85)
|.+|++|+..+.+.+|...+++.... ..-..+|..+.++||+...+....|..|.+....+..
T Consensus 263 G~~LlSGG~E~VLv~Wq~~T~~kqfL--PRLgs~I~~i~vS~ds~~~sl~~~DNqI~li~~~dl~ 325 (792)
T KOG1963|consen 263 GAYLLSGGREGVLVLWQLETGKKQFL--PRLGSPILHIVVSPDSDLYSLVLEDNQIHLIKASDLE 325 (792)
T ss_pred CceEeecccceEEEEEeecCCCcccc--cccCCeeEEEEEcCCCCeEEEEecCceEEEEeccchh
Confidence 57899999999999999998883332 2256789999999999999999999999888775543
No 261
>PRK02889 tolB translocation protein TolB; Provisional
Probab=97.99 E-value=0.00012 Score=40.96 Aligned_cols=71 Identities=13% Similarity=0.082 Sum_probs=44.5
Q ss_pred CcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcC---CCeEEEEEcCCccccccccccccceeEEEEeC
Q psy7058 11 QTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASS---DGVARLWNIETGEVDKEYSGHQKAITSLAFCD 84 (85)
Q Consensus 11 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 84 (85)
..|.++|.. +.....+.. +...+....|+|||+.++..+. ...|.+||+..++... +......+...+|+|
T Consensus 176 ~~L~~~D~d-G~~~~~l~~-~~~~v~~p~wSPDG~~la~~s~~~~~~~I~~~dl~~g~~~~-l~~~~g~~~~~~~SP 249 (427)
T PRK02889 176 YQLQISDAD-GQNAQSALS-SPEPIISPAWSPDGTKLAYVSFESKKPVVYVHDLATGRRRV-VANFKGSNSAPAWSP 249 (427)
T ss_pred cEEEEECCC-CCCceEecc-CCCCcccceEcCCCCEEEEEEccCCCcEEEEEECCCCCEEE-eecCCCCccceEECC
Confidence 457777764 333333333 4556889999999998877653 2469999998775432 222223445666766
No 262
>KOG1064|consensus
Probab=97.96 E-value=1.3e-05 Score=51.14 Aligned_cols=63 Identities=13% Similarity=0.255 Sum_probs=48.6
Q ss_pred CCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCcccccccc
Q psy7058 9 ADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYS 71 (85)
Q Consensus 9 ~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 71 (85)
.++.+.+||..-......+...|...++++.+.|..+.+++|+.+|.+++||+++.+.+..++
T Consensus 2313 d~~n~~lwDtl~~~~~s~v~~~H~~gaT~l~~~P~~qllisggr~G~v~l~D~rqrql~h~~~ 2375 (2439)
T KOG1064|consen 2313 DNRNVCLWDTLLPPMNSLVHTCHDGGATVLAYAPKHQLLISGGRKGEVCLFDIRQRQLRHTFQ 2375 (2439)
T ss_pred CCCcccchhcccCcccceeeeecCCCceEEEEcCcceEEEecCCcCcEEEeehHHHHHHHHhh
Confidence 457899999764333333334588889999999999999999999999999998776554443
No 263
>PRK04922 tolB translocation protein TolB; Provisional
Probab=97.94 E-value=0.00014 Score=40.80 Aligned_cols=81 Identities=14% Similarity=0.170 Sum_probs=50.5
Q ss_pred CceeEEeeCCC---cEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCC---CeEEEEEcCCccccccccccc
Q psy7058 1 MGLLATTSADQ---TARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSD---GVARLWNIETGEVDKEYSGHQ 74 (85)
Q Consensus 1 g~~l~~~~~~~---~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~i~~~~~~~~~~~~~~~~~~ 74 (85)
|++++..+.++ .|.+||+.+++.. .+.. ........|+|+|+.++..+.+ ..+.+++.. +.....+..+.
T Consensus 347 G~~Ia~~~~~~~~~~I~v~d~~~g~~~-~Lt~--~~~~~~p~~spdG~~i~~~s~~~g~~~L~~~~~~-g~~~~~l~~~~ 422 (433)
T PRK04922 347 GKKIAMVHGSGGQYRIAVMDLSTGSVR-TLTP--GSLDESPSFAPNGSMVLYATREGGRGVLAAVSTD-GRVRQRLVSAD 422 (433)
T ss_pred CCEEEEEECCCCceeEEEEECCCCCeE-ECCC--CCCCCCceECCCCCEEEEEEecCCceEEEEEECC-CCceEEcccCC
Confidence 34555443332 5889998877654 2222 1224457899999987765542 357777774 44445555455
Q ss_pred cceeEEEEeCC
Q psy7058 75 KAITSLAFCDF 85 (85)
Q Consensus 75 ~~v~~~~~~~~ 85 (85)
..+...+|+|.
T Consensus 423 g~~~~p~wsp~ 433 (433)
T PRK04922 423 GEVREPAWSPY 433 (433)
T ss_pred CCCCCCccCCC
Confidence 67788889884
No 264
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=97.92 E-value=0.00055 Score=36.96 Aligned_cols=57 Identities=14% Similarity=0.198 Sum_probs=40.2
Q ss_pred eEEeeCCCcEEEeeCCC-ce--eeeeeeccCCCcEEEEEecCCCCEEEEEc-CCCeEEEEEcC
Q psy7058 4 LATTSADQTARIWNTED-FS--LVRELGTANQRWVWDAAFTLDSKFLLTAS-SDGVARLWNIE 62 (85)
Q Consensus 4 l~~~~~~~~i~~~d~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~ 62 (85)
+++...++.|.+||+.+ ++ ....+. .......+.++|++++++.++ .++.|.+|++.
T Consensus 5 y~~~~~~~~I~~~~~~~~g~l~~~~~~~--~~~~~~~l~~spd~~~lyv~~~~~~~i~~~~~~ 65 (330)
T PRK11028 5 YIASPESQQIHVWNLNHEGALTLLQVVD--VPGQVQPMVISPDKRHLYVGVRPEFRVLSYRIA 65 (330)
T ss_pred EEEcCCCCCEEEEEECCCCceeeeeEEe--cCCCCccEEECCCCCEEEEEECCCCcEEEEEEC
Confidence 44557789999999963 33 333333 234467889999999887654 57889999986
No 265
>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....
Probab=97.90 E-value=2.3e-05 Score=28.97 Aligned_cols=17 Identities=41% Similarity=0.757 Sum_probs=15.4
Q ss_pred CceeEEeeCCCcEEEee
Q psy7058 1 MGLLATTSADQTARIWN 17 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d 17 (85)
++++++++.|+.|++||
T Consensus 23 ~~~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 23 GNFLASGSSDGTIRVWD 39 (39)
T ss_dssp SSEEEEEETTSEEEEEE
T ss_pred cccceeeCCCCEEEEEC
Confidence 46899999999999997
No 266
>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats.
Probab=97.90 E-value=0.00027 Score=40.59 Aligned_cols=52 Identities=17% Similarity=0.065 Sum_probs=38.5
Q ss_pred CCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEEEEeC
Q psy7058 31 NQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSLAFCD 84 (85)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 84 (85)
.+..+.+.+++|+...++.|+.||.|.+||...+..... ...-..+.++|+|
T Consensus 258 L~s~v~~ca~sp~E~kLvlGC~DgSiiLyD~~~~~t~~~--ka~~~P~~iaWHp 309 (545)
T PF11768_consen 258 LPSQVICCARSPSEDKLVLGCEDGSIILYDTTRGVTLLA--KAEFIPTLIAWHP 309 (545)
T ss_pred cCCcceEEecCcccceEEEEecCCeEEEEEcCCCeeeee--eecccceEEEEcC
Confidence 556789999999999999999999999999876533222 1223445666665
No 267
>PRK00178 tolB translocation protein TolB; Provisional
Probab=97.89 E-value=0.00053 Score=38.38 Aligned_cols=81 Identities=14% Similarity=0.042 Sum_probs=46.6
Q ss_pred CceeEEeeCC---CcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEE-EEcCCC--eEEEEEcCCccccccccccc
Q psy7058 1 MGLLATTSAD---QTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL-TASSDG--VARLWNIETGEVDKEYSGHQ 74 (85)
Q Consensus 1 g~~l~~~~~~---~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~i~~~~~~~~~~~~~~~~~~ 74 (85)
|++|+..+.+ ..|.+||+.+++...... .........|+|+|+.++ +...++ .|+++|+..+... .+..+.
T Consensus 210 G~~la~~s~~~~~~~l~~~~l~~g~~~~l~~--~~g~~~~~~~SpDG~~la~~~~~~g~~~Iy~~d~~~~~~~-~lt~~~ 286 (430)
T PRK00178 210 GKRIAYVSFEQKRPRIFVQNLDTGRREQITN--FEGLNGAPAWSPDGSKLAFVLSKDGNPEIYVMDLASRQLS-RVTNHP 286 (430)
T ss_pred CCEEEEEEcCCCCCEEEEEECCCCCEEEccC--CCCCcCCeEECCCCCEEEEEEccCCCceEEEEECCCCCeE-EcccCC
Confidence 3556544422 368888988776533221 223345689999998876 444444 6888898766532 222233
Q ss_pred cceeEEEEeC
Q psy7058 75 KAITSLAFCD 84 (85)
Q Consensus 75 ~~v~~~~~~~ 84 (85)
.......|+|
T Consensus 287 ~~~~~~~~sp 296 (430)
T PRK00178 287 AIDTEPFWGK 296 (430)
T ss_pred CCcCCeEECC
Confidence 3344455655
No 268
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=97.86 E-value=0.00072 Score=37.54 Aligned_cols=63 Identities=16% Similarity=0.037 Sum_probs=39.8
Q ss_pred CceeEEeeCC---CcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEE-EcCCC--eEEEEEcCCcc
Q psy7058 1 MGLLATTSAD---QTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT-ASSDG--VARLWNIETGE 65 (85)
Q Consensus 1 g~~l~~~~~~---~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~i~~~~~~~~~ 65 (85)
|++|+....+ ..|++||+.+++...... .........|+|+++.++. .+.++ .|++|++.+++
T Consensus 201 g~~la~~~~~~~~~~i~v~d~~~g~~~~~~~--~~~~~~~~~~spDg~~l~~~~~~~~~~~i~~~d~~~~~ 269 (417)
T TIGR02800 201 GQKLAYVSFESGKPEIYVQDLATGQREKVAS--FPGMNGAPAFSPDGSKLAVSLSKDGNPDIYVMDLDGKQ 269 (417)
T ss_pred CCEEEEEEcCCCCcEEEEEECCCCCEEEeec--CCCCccceEECCCCCEEEEEECCCCCccEEEEECCCCC
Confidence 3455544432 479999998775533222 3334566899999987664 44443 58888887654
No 269
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=97.85 E-value=0.00059 Score=37.89 Aligned_cols=70 Identities=13% Similarity=0.142 Sum_probs=44.1
Q ss_pred cEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCC---CeEEEEEcCCccccccccccccceeEEEEeC
Q psy7058 12 TARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSD---GVARLWNIETGEVDKEYSGHQKAITSLAFCD 84 (85)
Q Consensus 12 ~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 84 (85)
.|.++|...... ..+.. ....+....|+|+|+.++..... ..|++|++.+++... +..+...+..++|+|
T Consensus 171 ~l~~~d~~g~~~-~~l~~-~~~~~~~p~~Spdg~~la~~~~~~~~~~i~v~d~~~g~~~~-~~~~~~~~~~~~~sp 243 (417)
T TIGR02800 171 ELQVADYDGANP-QTITR-SREPILSPAWSPDGQKLAYVSFESGKPEIYVQDLATGQREK-VASFPGMNGAPAFSP 243 (417)
T ss_pred eEEEEcCCCCCC-EEeec-CCCceecccCCCCCCEEEEEEcCCCCcEEEEEECCCCCEEE-eecCCCCccceEECC
Confidence 577888754433 33333 44457888999999998876543 479999998764322 222333445566665
No 270
>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins. Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].
Probab=97.83 E-value=0.00013 Score=43.73 Aligned_cols=58 Identities=17% Similarity=0.167 Sum_probs=42.6
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEc
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNI 61 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 61 (85)
.++|.|+.+|.|++||-........+++ .+.+|..++.+.||++++..+.. .+.+++.
T Consensus 589 G~iavgs~~G~IRLyd~~g~~AKT~lp~-lG~pI~~iDvt~DGkwilaTc~t-yLlLi~t 646 (794)
T PF08553_consen 589 GYIAVGSNKGDIRLYDRLGKRAKTALPG-LGDPIIGIDVTADGKWILATCKT-YLLLIDT 646 (794)
T ss_pred ceEEEEeCCCcEEeecccchhhhhcCCC-CCCCeeEEEecCCCcEEEEeecc-eEEEEEE
Confidence 5799999999999999543332223333 67889999999999998877666 4444553
No 271
>KOG3914|consensus
Probab=97.83 E-value=0.00021 Score=39.26 Aligned_cols=53 Identities=21% Similarity=0.382 Sum_probs=43.6
Q ss_pred CCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCcccccccc-ccccceeEEEEe
Q psy7058 31 NQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYS-GHQKAITSLAFC 83 (85)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~v~~~~~~ 83 (85)
|-..+..+.++||++++++++.|..|++-.......+..+. +|.+-|..++.-
T Consensus 150 hvSml~dVavS~D~~~IitaDRDEkIRvs~ypa~f~IesfclGH~eFVS~isl~ 203 (390)
T KOG3914|consen 150 HVSMLLDVAVSPDDQFIITADRDEKIRVSRYPATFVIESFCLGHKEFVSTISLT 203 (390)
T ss_pred hhhhhheeeecCCCCEEEEecCCceEEEEecCcccchhhhccccHhheeeeeec
Confidence 77789999999999999999999999999887666665554 587777776653
No 272
>PRK01029 tolB translocation protein TolB; Provisional
Probab=97.82 E-value=0.00084 Score=37.82 Aligned_cols=82 Identities=11% Similarity=0.004 Sum_probs=50.9
Q ss_pred CceeEEeeCC---CcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEc-C--CCeEEEEEcCCccccccccccc
Q psy7058 1 MGLLATTSAD---QTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTAS-S--DGVARLWNIETGEVDKEYSGHQ 74 (85)
Q Consensus 1 g~~l~~~~~~---~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~i~~~~~~~~~~~~~~~~~~ 74 (85)
|++|+..+.+ ..|.+||+.+++....... ...+....|+|+|+.++... . ...+.++++..++...-.. ..
T Consensus 338 G~~Laf~~~~~g~~~I~v~dl~~g~~~~Lt~~--~~~~~~p~wSpDG~~L~f~~~~~g~~~L~~vdl~~g~~~~Lt~-~~ 414 (428)
T PRK01029 338 GKKIAFCSVIKGVRQICVYDLATGRDYQLTTS--PENKESPSWAIDSLHLVYSAGNSNESELYLISLITKKTRKIVI-GS 414 (428)
T ss_pred CCEEEEEEcCCCCcEEEEEECCCCCeEEccCC--CCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCEEEeec-CC
Confidence 3555544432 3688999987766443222 23456789999998876433 2 3468888887665433332 34
Q ss_pred cceeEEEEeCC
Q psy7058 75 KAITSLAFCDF 85 (85)
Q Consensus 75 ~~v~~~~~~~~ 85 (85)
..+...+|+|.
T Consensus 415 g~~~~p~Ws~~ 425 (428)
T PRK01029 415 GEKRFPSWGAF 425 (428)
T ss_pred CcccCceecCC
Confidence 45677888874
No 273
>KOG4497|consensus
Probab=97.80 E-value=3.3e-05 Score=41.81 Aligned_cols=82 Identities=17% Similarity=0.156 Sum_probs=61.9
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEE-EEcCCCeEEEEEcCCccccccccccccceeE
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL-TASSDGVARLWNIETGEVDKEYSGHQKAITS 79 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~ 79 (85)
|+++|+.++- .+.+-|..+.+....+.. -..|..+.|.-|..+++ ....++.|.+|++.+.+-...+.....++..
T Consensus 20 g~yiAs~~~y-rlviRd~~tlq~~qlf~c--ldki~yieW~ads~~ilC~~yk~~~vqvwsl~Qpew~ckIdeg~agls~ 96 (447)
T KOG4497|consen 20 GNYIASLSRY-RLVIRDSETLQLHQLFLC--LDKIVYIEWKADSCHILCVAYKDPKVQVWSLVQPEWYCKIDEGQAGLSS 96 (447)
T ss_pred CCeeeeeeee-EEEEeccchhhHHHHHHH--HHHhhheeeeccceeeeeeeeccceEEEEEeecceeEEEeccCCCccee
Confidence 5677777765 677778877665443332 23477788888876655 4567889999999999888888888899999
Q ss_pred EEEeCC
Q psy7058 80 LAFCDF 85 (85)
Q Consensus 80 ~~~~~~ 85 (85)
++|||.
T Consensus 97 ~~WSPd 102 (447)
T KOG4497|consen 97 ISWSPD 102 (447)
T ss_pred eeECCC
Confidence 999984
No 274
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=97.75 E-value=0.00091 Score=38.20 Aligned_cols=64 Identities=9% Similarity=0.150 Sum_probs=50.3
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCC----eEEEEEcCCcc
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDG----VARLWNIETGE 65 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~i~~~~~~~~~ 65 (85)
|++++.+.....+-+.|+.+++....-+. ....|..+.|+|++.+++.+--++ .|+++|+..++
T Consensus 413 GK~~vvaNdr~el~vididngnv~~idkS-~~~lItdf~~~~nsr~iAYafP~gy~tq~Iklydm~~~K 480 (668)
T COG4946 413 GKKVVVANDRFELWVIDIDNGNVRLIDKS-EYGLITDFDWHPNSRWIAYAFPEGYYTQSIKLYDMDGGK 480 (668)
T ss_pred CcEEEEEcCceEEEEEEecCCCeeEeccc-ccceeEEEEEcCCceeEEEecCcceeeeeEEEEecCCCe
Confidence 45677777777888999999887655444 556799999999999999876655 68999987655
No 275
>PRK04792 tolB translocation protein TolB; Provisional
Probab=97.74 E-value=0.001 Score=37.66 Aligned_cols=81 Identities=17% Similarity=0.042 Sum_probs=45.8
Q ss_pred CceeEEeeC-C--CcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEE-EcCCCe--EEEEEcCCccccccccccc
Q psy7058 1 MGLLATTSA-D--QTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT-ASSDGV--ARLWNIETGEVDKEYSGHQ 74 (85)
Q Consensus 1 g~~l~~~~~-~--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--i~~~~~~~~~~~~~~~~~~ 74 (85)
|++|+..+. + ..|+++|+.+++...... .........|+|||+.++. .+.++. |+++|+..++.. .+..+.
T Consensus 229 G~~La~~s~~~g~~~L~~~dl~tg~~~~lt~--~~g~~~~~~wSPDG~~La~~~~~~g~~~Iy~~dl~tg~~~-~lt~~~ 305 (448)
T PRK04792 229 GRKLAYVSFENRKAEIFVQDIYTQVREKVTS--FPGINGAPRFSPDGKKLALVLSKDGQPEIYVVDIATKALT-RITRHR 305 (448)
T ss_pred CCEEEEEEecCCCcEEEEEECCCCCeEEecC--CCCCcCCeeECCCCCEEEEEEeCCCCeEEEEEECCCCCeE-ECccCC
Confidence 345554432 2 358888988766533221 2222346789999997764 455554 777787765432 232233
Q ss_pred cceeEEEEeC
Q psy7058 75 KAITSLAFCD 84 (85)
Q Consensus 75 ~~v~~~~~~~ 84 (85)
......+|+|
T Consensus 306 ~~~~~p~wSp 315 (448)
T PRK04792 306 AIDTEPSWHP 315 (448)
T ss_pred CCccceEECC
Confidence 3445566665
No 276
>KOG1912|consensus
Probab=97.73 E-value=0.00034 Score=41.95 Aligned_cols=80 Identities=15% Similarity=0.187 Sum_probs=62.7
Q ss_pred eeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCC------------CEEEEEcCCCeEEEEEcCCccccccc
Q psy7058 3 LLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDS------------KFLLTASSDGVARLWNIETGEVDKEY 70 (85)
Q Consensus 3 ~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~i~~~~~~~~~~~~~~ 70 (85)
+++-|+ ...+.+-|.++-+.+..+.. |+..|+.+.|.|.. -.+++++..|.|.+||...+..+..+
T Consensus 28 LiAygs-hslV~VVDs~s~q~iqsie~-h~s~V~~VrWap~~~p~~llS~~~~~lliAsaD~~GrIil~d~~~~s~~~~l 105 (1062)
T KOG1912|consen 28 LIAYGS-HSLVSVVDSRSLQLIQSIEL-HQSAVTSVRWAPAPSPRDLLSPSSSQLLIASADISGRIILVDFVLASVINWL 105 (1062)
T ss_pred eEEEec-CceEEEEehhhhhhhhcccc-CccceeEEEeccCCCchhccCccccceeEEeccccCcEEEEEehhhhhhhhh
Confidence 344443 45788889998888888877 77889999998731 13567777899999999998888888
Q ss_pred cccccceeEEEEeC
Q psy7058 71 SGHQKAITSLAFCD 84 (85)
Q Consensus 71 ~~~~~~v~~~~~~~ 84 (85)
..+.+++.++.|-+
T Consensus 106 ~~~~~~~qdl~W~~ 119 (1062)
T KOG1912|consen 106 SHSNDSVQDLCWVP 119 (1062)
T ss_pred cCCCcchhheeeee
Confidence 88888888888854
No 277
>KOG2315|consensus
Probab=97.72 E-value=0.00095 Score=38.38 Aligned_cols=67 Identities=15% Similarity=0.223 Sum_probs=44.9
Q ss_pred cEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcC---CCeEEEEEcCCccccccccccccceeEEEEeC
Q psy7058 12 TARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASS---DGVARLWNIETGEVDKEYSGHQKAITSLAFCD 84 (85)
Q Consensus 12 ~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 84 (85)
.+.++|.+ +.++..+. .++-+++-|+|.|++++.++- .|.+-+||+.+.+.+..+.... .+-+.|+|
T Consensus 295 kvtifnlr-~~~v~df~---egpRN~~~fnp~g~ii~lAGFGNL~G~mEvwDv~n~K~i~~~~a~~--tt~~eW~P 364 (566)
T KOG2315|consen 295 KVTIFNLR-GKPVFDFP---EGPRNTAFFNPHGNIILLAGFGNLPGDMEVWDVPNRKLIAKFKAAN--TTVFEWSP 364 (566)
T ss_pred eEEEEcCC-CCEeEeCC---CCCccceEECCCCCEEEEeecCCCCCceEEEeccchhhccccccCC--ceEEEEcC
Confidence 34444443 34444332 345788999999999887654 5789999999988777776433 33366666
No 278
>KOG4532|consensus
Probab=97.71 E-value=0.00089 Score=35.64 Aligned_cols=64 Identities=11% Similarity=0.053 Sum_probs=47.2
Q ss_pred eeEEeeCCCcEEEeeCCCceeeeee----eccCCCcEEEEEecCCCC--EEEEEcCCCeEEEEEcCCccc
Q psy7058 3 LLATTSADQTARIWNTEDFSLVREL----GTANQRWVWDAAFTLDSK--FLLTASSDGVARLWNIETGEV 66 (85)
Q Consensus 3 ~l~~~~~~~~i~~~d~~~~~~~~~~----~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~~~~~~~~~~ 66 (85)
.+|++.+|+.+.+||++....+... +..+.+.+..+.|++-|. +++..-.-+.+.+.|+++.+.
T Consensus 217 ~FAv~~Qdg~~~I~DVR~~~tpm~~~sstrp~hnGa~R~c~Fsl~g~lDLLf~sEhfs~~hv~D~R~~~~ 286 (344)
T KOG4532|consen 217 QFAVVFQDGTCAIYDVRNMATPMAEISSTRPHHNGAFRVCRFSLYGLLDLLFISEHFSRVHVVDTRNYVN 286 (344)
T ss_pred eEEEEecCCcEEEEEecccccchhhhcccCCCCCCceEEEEecCCCcceEEEEecCcceEEEEEcccCce
Confidence 5799999999999999976544322 223677899999998664 344555567899999987753
No 279
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=97.71 E-value=0.0015 Score=36.07 Aligned_cols=63 Identities=13% Similarity=0.200 Sum_probs=48.8
Q ss_pred CCCcEEEeeCCCceeeeeeeccCC------CcEEEEEecCCCCEEEEEc-C-CCeEEEEEcCCcccccccc
Q psy7058 9 ADQTARIWNTEDFSLVRELGTANQ------RWVWDAAFTLDSKFLLTAS-S-DGVARLWNIETGEVDKEYS 71 (85)
Q Consensus 9 ~~~~i~~~d~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~-~-~~~i~~~~~~~~~~~~~~~ 71 (85)
.+..|.+||+.+.+....+..... .....+.++|||++++... . +..+.+.|+..++.+.++.
T Consensus 75 ~~d~V~v~D~~t~~~~~~i~~p~~p~~~~~~~~~~~~ls~dgk~l~V~n~~p~~~V~VvD~~~~kvv~ei~ 145 (352)
T TIGR02658 75 RTDYVEVIDPQTHLPIADIELPEGPRFLVGTYPWMTSLTPDNKTLLFYQFSPSPAVGVVDLEGKAFVRMMD 145 (352)
T ss_pred CCCEEEEEECccCcEEeEEccCCCchhhccCccceEEECCCCCEEEEecCCCCCEEEEEECCCCcEEEEEe
Confidence 578899999999999888774211 2234788999999988765 3 6899999999888776655
No 280
>KOG1409|consensus
Probab=97.70 E-value=8.9e-05 Score=40.27 Aligned_cols=63 Identities=16% Similarity=0.286 Sum_probs=48.8
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCc
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETG 64 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 64 (85)
+.|.+|..|..+.+||+...+...-....+...+..+...+.-+.+.+++.|+.|.+|+++..
T Consensus 210 ~~LfSg~~d~~vi~wdigg~~g~~~el~gh~~kV~~l~~~~~t~~l~S~~edg~i~~w~mn~~ 272 (404)
T KOG1409|consen 210 RLLFSGASDHSVIMWDIGGRKGTAYELQGHNDKVQALSYAQHTRQLISCGEDGGIVVWNMNVK 272 (404)
T ss_pred cEEEeccccCceEEEeccCCcceeeeeccchhhhhhhhhhhhheeeeeccCCCeEEEEeccce
Confidence 467899999999999997655444333336667777777777788899999999999998754
No 281
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=97.61 E-value=0.0013 Score=36.22 Aligned_cols=71 Identities=15% Similarity=0.087 Sum_probs=45.2
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccc
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQ 74 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 74 (85)
+.+..++.++.+..+|..+++..-............... .+..++.++.++.++++|..+++.+..+..+.
T Consensus 280 ~~vyv~~~~G~l~~~d~~tG~~~W~~~~~~~~~~ssp~i--~g~~l~~~~~~G~l~~~d~~tG~~~~~~~~~~ 350 (377)
T TIGR03300 280 NRLYVTDADGVVVALDRRSGSELWKNDELKYRQLTAPAV--VGGYLVVGDFEGYLHWLSREDGSFVARLKTDG 350 (377)
T ss_pred CEEEEECCCCeEEEEECCCCcEEEccccccCCccccCEE--ECCEEEEEeCCCEEEEEECCCCCEEEEEEcCC
Confidence 456666777888888887776654432101111111111 35678888999999999999898877665433
No 282
>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal
Probab=97.53 E-value=0.0028 Score=33.77 Aligned_cols=31 Identities=23% Similarity=0.293 Sum_probs=27.8
Q ss_pred CcEEEEEecCCCCEEEEEcCCCeEEEEEcCC
Q psy7058 33 RWVWDAAFTLDSKFLLTASSDGVARLWNIET 63 (85)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 63 (85)
..-..++|+||+..++.+.+.|+|++||+..
T Consensus 44 PQWRkl~WSpD~tlLa~a~S~G~i~vfdl~g 74 (282)
T PF15492_consen 44 PQWRKLAWSPDCTLLAYAESTGTIRVFDLMG 74 (282)
T ss_pred chheEEEECCCCcEEEEEcCCCeEEEEeccc
Confidence 4567899999999999999999999999853
No 283
>KOG4649|consensus
Probab=97.51 E-value=0.0026 Score=33.92 Aligned_cols=70 Identities=10% Similarity=-0.043 Sum_probs=50.7
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCcccccccc
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYS 71 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 71 (85)
|++++.|...+.+++.+..++.....+.....- -......+++..+..++.|++.+..|.++..++.+.+
T Consensus 63 gdfVV~GCy~g~lYfl~~~tGs~~w~f~~~~~v-k~~a~~d~~~glIycgshd~~~yalD~~~~~cVyksk 132 (354)
T KOG4649|consen 63 GDFVVLGCYSGGLYFLCVKTGSQIWNFVILETV-KVRAQCDFDGGLIYCGSHDGNFYALDPKTYGCVYKSK 132 (354)
T ss_pred CCEEEEEEccCcEEEEEecchhheeeeeehhhh-ccceEEcCCCceEEEecCCCcEEEecccccceEEecc
Confidence 578899999999999999998665555441211 1223346788899999999999999988766554433
No 284
>PRK01029 tolB translocation protein TolB; Provisional
Probab=97.51 E-value=0.0047 Score=34.97 Aligned_cols=82 Identities=16% Similarity=0.024 Sum_probs=44.2
Q ss_pred CceeEEe-eCCCc--EEEeeCCC-ceeeeeeeccCCCcEEEEEecCCCCEEEEEcCC---CeEEEEEcCCcccccccccc
Q psy7058 1 MGLLATT-SADQT--ARIWNTED-FSLVRELGTANQRWVWDAAFTLDSKFLLTASSD---GVARLWNIETGEVDKEYSGH 73 (85)
Q Consensus 1 g~~l~~~-~~~~~--i~~~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~i~~~~~~~~~~~~~~~~~ 73 (85)
|+.|+.. ..++. ++++++.. +.....+.. ....+....|+|||+.++....+ ..|.+||+..++...-.. .
T Consensus 292 G~~Laf~s~~~g~~~ly~~~~~~~g~~~~~lt~-~~~~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~~g~~~~Lt~-~ 369 (428)
T PRK01029 292 GTRLVFVSNKDGRPRIYIMQIDPEGQSPRLLTK-KYRNSSCPAWSPDGKKIAFCSVIKGVRQICVYDLATGRDYQLTT-S 369 (428)
T ss_pred CCEEEEEECCCCCceEEEEECcccccceEEecc-CCCCccceeECCCCCEEEEEEcCCCCcEEEEEECCCCCeEEccC-C
Confidence 3445433 34554 44444432 222233322 23345678899999988765443 468999997775432221 2
Q ss_pred ccceeEEEEeC
Q psy7058 74 QKAITSLAFCD 84 (85)
Q Consensus 74 ~~~v~~~~~~~ 84 (85)
...+....|+|
T Consensus 370 ~~~~~~p~wSp 380 (428)
T PRK01029 370 PENKESPSWAI 380 (428)
T ss_pred CCCccceEECC
Confidence 23445566665
No 285
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=97.50 E-value=0.0043 Score=34.33 Aligned_cols=58 Identities=16% Similarity=0.150 Sum_probs=48.5
Q ss_pred CcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCC-EEEEEc-CCCeEEEEEcCCccccccc
Q psy7058 11 QTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSK-FLLTAS-SDGVARLWNIETGEVDKEY 70 (85)
Q Consensus 11 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~i~~~~~~~~~~~~~~ 70 (85)
+.+-++|+.+++....+.. ......+.+++|++ .+++.. .++.|.++|..+++.+..+
T Consensus 279 ~~V~ViD~~t~kvi~~i~v--G~~~~~iavS~Dgkp~lyvtn~~s~~VsViD~~t~k~i~~i 338 (352)
T TIGR02658 279 RFLFVVDAKTGKRLRKIEL--GHEIDSINVSQDAKPLLYALSTGDKTLYIFDAETGKELSSV 338 (352)
T ss_pred CEEEEEECCCCeEEEEEeC--CCceeeEEECCCCCeEEEEeCCCCCcEEEEECcCCeEEeee
Confidence 4788999999999998875 34589999999999 776655 5788999999999888777
No 286
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=97.49 E-value=0.0042 Score=38.92 Aligned_cols=66 Identities=11% Similarity=0.173 Sum_probs=47.0
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeecc------------CCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccc
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTA------------NQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEV 66 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 66 (85)
|+.+++-..++.|++||..++........+ .-.....++++++|..+++-..++.|++||+.+++.
T Consensus 815 G~LYVADs~N~rIrviD~~tg~v~tiaG~G~~G~~dG~~~~a~l~~P~GIavd~dG~lyVaDt~Nn~Irvid~~~~~~ 892 (1057)
T PLN02919 815 GQIYVADSYNHKIKKLDPATKRVTTLAGTGKAGFKDGKALKAQLSEPAGLALGENGRLFVADTNNSLIRYLDLNKGEA 892 (1057)
T ss_pred CcEEEEECCCCEEEEEECCCCeEEEEeccCCcCCCCCcccccccCCceEEEEeCCCCEEEEECCCCEEEEEECCCCcc
Confidence 345667777889999998876554322110 012356789999999888888899999999987653
No 287
>KOG0309|consensus
Probab=97.48 E-value=0.0002 Score=42.67 Aligned_cols=80 Identities=18% Similarity=0.279 Sum_probs=58.1
Q ss_pred eeEEeeCCCcEEEeeCCCce-eeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCcc-ccccccccccceeEE
Q psy7058 3 LLATTSADQTARIWNTEDFS-LVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGE-VDKEYSGHQKAITSL 80 (85)
Q Consensus 3 ~l~~~~~~~~i~~~d~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~v~~~ 80 (85)
.+++++-|..+..||+++.. +...... .......+.|+.....++..+..+.+++||.+.+. ++..+++|...|+.+
T Consensus 129 Vlatcsvdt~vh~wd~rSp~~p~ys~~~-w~s~asqVkwnyk~p~vlasshg~~i~vwd~r~gs~pl~s~K~~vs~vn~~ 207 (1081)
T KOG0309|consen 129 VLATCSVDTYVHAWDMRSPHRPFYSTSS-WRSAASQVKWNYKDPNVLASSHGNDIFVWDLRKGSTPLCSLKGHVSSVNSI 207 (1081)
T ss_pred ceeeccccccceeeeccCCCcceeeeec-ccccCceeeecccCcchhhhccCCceEEEeccCCCcceEEecccceeeehH
Confidence 47899999999999998764 4445444 33446778898855555555677899999998764 556677777777776
Q ss_pred EEe
Q psy7058 81 AFC 83 (85)
Q Consensus 81 ~~~ 83 (85)
.|+
T Consensus 208 ~fn 210 (1081)
T KOG0309|consen 208 DFN 210 (1081)
T ss_pred HHh
Confidence 654
No 288
>KOG2041|consensus
Probab=97.47 E-value=0.0014 Score=39.32 Aligned_cols=81 Identities=16% Similarity=0.254 Sum_probs=59.7
Q ss_pred ceeEEeeCCCcEEEeeCCCceee---------------eeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccc
Q psy7058 2 GLLATTSADQTARIWNTEDFSLV---------------RELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEV 66 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 66 (85)
++++.|+.||.+++..+.+...- ..+. +|+..+.-+.|+...+.+-+.+.+|.|.+|-+-.+.-
T Consensus 27 gyIAcgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLe-GH~~sV~vvTWNe~~QKLTtSDt~GlIiVWmlykgsW 105 (1189)
T KOG2041|consen 27 GYIACGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLE-GHNASVMVVTWNENNQKLTTSDTSGLIIVWMLYKGSW 105 (1189)
T ss_pred CeEEeccccceeEEEEccccCCcccccccccccccchhhhhc-cCcceEEEEEeccccccccccCCCceEEEEeeecccH
Confidence 57899999999999877543211 1122 3778899999999889999999999999999887764
Q ss_pred ccccc--ccccceeEEEEe
Q psy7058 67 DKEYS--GHQKAITSLAFC 83 (85)
Q Consensus 67 ~~~~~--~~~~~v~~~~~~ 83 (85)
...+- -...-|.+|+|+
T Consensus 106 ~EEMiNnRnKSvV~SmsWn 124 (1189)
T KOG2041|consen 106 CEEMINNRNKSVVVSMSWN 124 (1189)
T ss_pred HHHHhhCcCccEEEEEEEc
Confidence 43322 234566777775
No 289
>PRK00178 tolB translocation protein TolB; Provisional
Probab=97.46 E-value=0.0032 Score=35.35 Aligned_cols=70 Identities=13% Similarity=0.086 Sum_probs=42.9
Q ss_pred cEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCC---CeEEEEEcCCccccccccccccceeEEEEeC
Q psy7058 12 TARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSD---GVARLWNIETGEVDKEYSGHQKAITSLAFCD 84 (85)
Q Consensus 12 ~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 84 (85)
.|.++|....+. ..+.. +...+....|+|+|+.++..+.+ ..|.+|++..++... +......+...+|+|
T Consensus 180 ~l~~~d~~g~~~-~~l~~-~~~~~~~p~wSpDG~~la~~s~~~~~~~l~~~~l~~g~~~~-l~~~~g~~~~~~~Sp 252 (430)
T PRK00178 180 TLQRSDYDGARA-VTLLQ-SREPILSPRWSPDGKRIAYVSFEQKRPRIFVQNLDTGRREQ-ITNFEGLNGAPAWSP 252 (430)
T ss_pred EEEEECCCCCCc-eEEec-CCCceeeeeECCCCCEEEEEEcCCCCCEEEEEECCCCCEEE-ccCCCCCcCCeEECC
Confidence 377778765443 33333 45568899999999988765433 468899997765322 221222334566665
No 290
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=97.44 E-value=0.0037 Score=35.60 Aligned_cols=57 Identities=16% Similarity=0.179 Sum_probs=36.6
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcC
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIE 62 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 62 (85)
|..|+..+. +.|.+||+.+++.++++.. . .+..+-|++++.+++..+.+ .+.+.+..
T Consensus 117 G~LL~~~~~-~~i~~yDw~~~~~i~~i~v-~--~vk~V~Ws~~g~~val~t~~-~i~il~~~ 173 (443)
T PF04053_consen 117 GNLLGVKSS-DFICFYDWETGKLIRRIDV-S--AVKYVIWSDDGELVALVTKD-SIYILKYN 173 (443)
T ss_dssp SSSEEEEET-TEEEEE-TTT--EEEEESS----E-EEEEE-TTSSEEEEE-S--SEEEEEE-
T ss_pred CcEEEEECC-CCEEEEEhhHcceeeEEec-C--CCcEEEEECCCCEEEEEeCC-eEEEEEec
Confidence 344555544 4799999999999998874 2 38999999999999988766 66666543
No 291
>KOG2066|consensus
Probab=97.44 E-value=0.002 Score=38.73 Aligned_cols=74 Identities=14% Similarity=0.152 Sum_probs=51.6
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEEE
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSLA 81 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~ 81 (85)
.+++-|..+|.+++++.. +++ .+... +... ..+|.++++++.||.+.|..+-+.+..-++. ...++.+++
T Consensus 50 ~~~~~GtH~g~v~~~~~~-~~~-~~~~~-~s~~------~~~Gey~asCS~DGkv~I~sl~~~~~~~~~d-f~rpiksia 119 (846)
T KOG2066|consen 50 KFFALGTHRGAVYLTTCQ-GNP-KTNFD-HSSS------ILEGEYVASCSDDGKVVIGSLFTDDEITQYD-FKRPIKSIA 119 (846)
T ss_pred ceeeeccccceEEEEecC-Ccc-ccccc-cccc------ccCCceEEEecCCCcEEEeeccCCccceeEe-cCCcceeEE
Confidence 467777788888887755 333 22222 2221 5589999999999999999887776655554 457888888
Q ss_pred EeCC
Q psy7058 82 FCDF 85 (85)
Q Consensus 82 ~~~~ 85 (85)
++|+
T Consensus 120 l~Pd 123 (846)
T KOG2066|consen 120 LHPD 123 (846)
T ss_pred eccc
Confidence 8874
No 292
>KOG3621|consensus
Probab=97.33 E-value=0.0021 Score=38.12 Aligned_cols=61 Identities=13% Similarity=0.119 Sum_probs=46.6
Q ss_pred eeEEeeCCCcEEEeeCCCceeeeee-----eccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCC
Q psy7058 3 LLATTSADQTARIWNTEDFSLVREL-----GTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIET 63 (85)
Q Consensus 3 ~l~~~~~~~~i~~~d~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 63 (85)
++|.|+..+.|.++-+....+.... ...|+..|++++|++++..+++|++.|.|..-.+..
T Consensus 90 lvAagt~~g~V~v~ql~~~~p~~~~~~t~~d~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L~s 155 (726)
T KOG3621|consen 90 LVAAGTASGRVSVFQLNKELPRDLDYVTPCDKSHKCRVTALEWSKNGMKLYSGDSQGKVVLTELDS 155 (726)
T ss_pred hhhhhcCCceEEeehhhccCCCcceeeccccccCCceEEEEEecccccEEeecCCCceEEEEEech
Confidence 4577788888888887764432222 222577899999999999999999999998877765
No 293
>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin. These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus
Probab=97.33 E-value=0.0056 Score=31.69 Aligned_cols=63 Identities=14% Similarity=0.149 Sum_probs=45.7
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeee------ec-------cCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCc
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVREL------GT-------ANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETG 64 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~------~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 64 (85)
+++|++-..+|.+++||+.+++..... -. .....|..+.++.+|..+++-+ ++..+.|+...+
T Consensus 22 ~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~ls-ng~~y~y~~~L~ 97 (219)
T PF07569_consen 22 GSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIVTLS-NGDSYSYSPDLG 97 (219)
T ss_pred CCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEEEEe-CCCEEEeccccc
Confidence 467888889999999999987764433 11 1335688888888898877764 567788877544
No 294
>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region
Probab=97.28 E-value=0.004 Score=28.84 Aligned_cols=55 Identities=16% Similarity=0.106 Sum_probs=39.5
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEc
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNI 61 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 61 (85)
+.|++|+.|..|++|+- .+.+..+.. ...+..+.-... ..++.+-.+|+|-+|+-
T Consensus 16 ~eLlvGs~D~~IRvf~~--~e~~~Ei~e--~~~v~~L~~~~~-~~F~Y~l~NGTVGvY~~ 70 (111)
T PF14783_consen 16 NELLVGSDDFEIRVFKG--DEIVAEITE--TDKVTSLCSLGG-GRFAYALANGTVGVYDR 70 (111)
T ss_pred ceEEEecCCcEEEEEeC--CcEEEEEec--ccceEEEEEcCC-CEEEEEecCCEEEEEeC
Confidence 46899999999999984 456666654 334666655444 56888888888877764
No 295
>KOG2314|consensus
Probab=97.22 E-value=0.0022 Score=37.33 Aligned_cols=67 Identities=22% Similarity=0.391 Sum_probs=44.9
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcC-----------CCeEEEEEcCCccccccc
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASS-----------DGVARLWNIETGEVDKEY 70 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~i~~~~~~~~~~~~~~ 70 (85)
.+|++=... -|.+|--.+.....++. |+ .+..+.|||..++|++-+. ...+.|||+.+|...+.+
T Consensus 223 TYL~t~Hk~-GI~lWGG~~f~r~~RF~--Hp-~Vq~idfSP~EkYLVT~s~~p~~~~~~d~e~~~l~IWDI~tG~lkrsF 298 (698)
T KOG2314|consen 223 TYLVTFHKQ-GIALWGGESFDRIQRFY--HP-GVQFIDFSPNEKYLVTYSPEPIIVEEDDNEGQQLIIWDIATGLLKRSF 298 (698)
T ss_pred eEEEEEecc-ceeeecCccHHHHHhcc--CC-CceeeecCCccceEEEecCCccccCcccCCCceEEEEEccccchhcce
Confidence 344444433 35666655544444443 43 4889999999999998652 257999999999877766
Q ss_pred cc
Q psy7058 71 SG 72 (85)
Q Consensus 71 ~~ 72 (85)
..
T Consensus 299 ~~ 300 (698)
T KOG2314|consen 299 PV 300 (698)
T ss_pred ec
Confidence 54
No 296
>KOG4190|consensus
Probab=97.20 E-value=0.0012 Score=38.57 Aligned_cols=66 Identities=20% Similarity=0.258 Sum_probs=52.1
Q ss_pred EEeeCCCcEEEeeCCCceeeeeeecc----CCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccc
Q psy7058 5 ATTSADQTARIWNTEDFSLVRELGTA----NQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEY 70 (85)
Q Consensus 5 ~~~~~~~~i~~~d~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 70 (85)
+-++...+++++|.+..+-...++.. .+..+.++++.+.|.+++.+-++|+|.+.|.++++.+...
T Consensus 845 AgcsaeSTVKl~DaRsce~~~E~kVcna~~Pna~~R~iaVa~~GN~lAa~LSnGci~~LDaR~G~vINsw 914 (1034)
T KOG4190|consen 845 AGCSAESTVKLFDARSCEWTCELKVCNAPGPNALTRAIAVADKGNKLAAALSNGCIAILDARNGKVINSW 914 (1034)
T ss_pred eeccchhhheeeecccccceeeEEeccCCCCchheeEEEeccCcchhhHHhcCCcEEEEecCCCceeccC
Confidence 33467789999999988766655431 2345789999999999999999999999999999866543
No 297
>KOG1275|consensus
Probab=97.19 E-value=0.0096 Score=36.78 Aligned_cols=78 Identities=12% Similarity=0.092 Sum_probs=60.0
Q ss_pred eeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEEEE
Q psy7058 3 LLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSLAF 82 (85)
Q Consensus 3 ~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~~ 82 (85)
.++.|+-...+..+|.++.+..+.... ....+.-++. +++.+.+|+..|+|.+-|.++.+.+.++..|.+.|.++..
T Consensus 149 ~~i~Gg~Q~~li~~Dl~~~~e~r~~~v-~a~~v~imR~--Nnr~lf~G~t~G~V~LrD~~s~~~iht~~aHs~siSDfDv 225 (1118)
T KOG1275|consen 149 TLIMGGLQEKLIHIDLNTEKETRTTNV-SASGVTIMRY--NNRNLFCGDTRGTVFLRDPNSFETIHTFDAHSGSISDFDV 225 (1118)
T ss_pred ceeecchhhheeeeecccceeeeeeec-cCCceEEEEe--cCcEEEeecccceEEeecCCcCceeeeeeccccceeeeec
Confidence 355666666777788888877766654 2223555554 6889999999999999999999999999999999987764
Q ss_pred e
Q psy7058 83 C 83 (85)
Q Consensus 83 ~ 83 (85)
.
T Consensus 226 ~ 226 (1118)
T KOG1275|consen 226 Q 226 (1118)
T ss_pred c
Confidence 3
No 298
>KOG4190|consensus
Probab=97.13 E-value=0.0018 Score=37.88 Aligned_cols=64 Identities=19% Similarity=0.345 Sum_probs=45.9
Q ss_pred ceeEEeeCCCcEEEeeCCCc-------eeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccc
Q psy7058 2 GLLATTSADQTARIWNTEDF-------SLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDK 68 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 68 (85)
+.+++++.|.++++|.++.. .+..++.. |..+|+++.+--+-+.+++ -|+.|.+||.--++++.
T Consensus 748 NSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~a-Hkk~i~~igfL~~lr~i~S--cD~giHlWDPFigr~La 818 (1034)
T KOG4190|consen 748 NSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQA-HKKPIHDIGFLADLRSIAS--CDGGIHLWDPFIGRLLA 818 (1034)
T ss_pred cceeeccCCceEEEEEeccccCccccceeeeEhhh-ccCcccceeeeeccceeee--ccCcceeecccccchhH
Confidence 45789999999999998742 23334444 7888999988666555544 57889999976665554
No 299
>KOG2395|consensus
Probab=97.10 E-value=0.0028 Score=36.73 Aligned_cols=54 Identities=13% Similarity=0.113 Sum_probs=40.2
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeE
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVA 56 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 56 (85)
.+++.|+.+|.|++||- .+....+...+...+|..+..+.+|.+++..+..-.+
T Consensus 442 G~IvvgS~~GdIRLYdr-i~~~AKTAlPgLG~~I~hVdvtadGKwil~Tc~tyLl 495 (644)
T KOG2395|consen 442 GYIVVGSLKGDIRLYDR-IGRRAKTALPGLGDAIKHVDVTADGKWILATCKTYLL 495 (644)
T ss_pred ceEEEeecCCcEEeehh-hhhhhhhcccccCCceeeEEeeccCcEEEEecccEEE
Confidence 57899999999999997 4433333333367789999999999998876665433
No 300
>PRK04792 tolB translocation protein TolB; Provisional
Probab=97.10 E-value=0.012 Score=33.61 Aligned_cols=70 Identities=16% Similarity=0.198 Sum_probs=41.8
Q ss_pred cEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcC-CC--eEEEEEcCCccccccccccccceeEEEEeCC
Q psy7058 12 TARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASS-DG--VARLWNIETGEVDKEYSGHQKAITSLAFCDF 85 (85)
Q Consensus 12 ~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 85 (85)
.|.++|+.+++... +.. . .......|+|+|..++.... ++ .+.+++. ++.....+......+...+|+|.
T Consensus 375 ~I~~~dl~~g~~~~-lt~-~-~~d~~ps~spdG~~I~~~~~~~g~~~l~~~~~-~G~~~~~l~~~~g~~~~p~Wsp~ 447 (448)
T PRK04792 375 NIARQDLETGAMQV-LTS-T-RLDESPSVAPNGTMVIYSTTYQGKQVLAAVSI-DGRFKARLPAGQGEVKSPAWSPF 447 (448)
T ss_pred EEEEEECCCCCeEE-ccC-C-CCCCCceECCCCCEEEEEEecCCceEEEEEEC-CCCceEECcCCCCCcCCCccCCC
Confidence 45567777665432 221 1 11223479999998765443 33 4677776 45555556555567788889884
No 301
>KOG3617|consensus
Probab=97.09 E-value=0.0034 Score=38.55 Aligned_cols=58 Identities=16% Similarity=0.228 Sum_probs=46.8
Q ss_pred eEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcC
Q psy7058 4 LATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIE 62 (85)
Q Consensus 4 l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 62 (85)
|+++-.-+.+.+|...+.+ ..++...|+.++..+.|+++|..+.+++.-|.+.+|...
T Consensus 74 La~gwe~g~~~v~~~~~~e-~htv~~th~a~i~~l~wS~~G~~l~t~d~~g~v~lwr~d 131 (1416)
T KOG3617|consen 74 LAQGWEMGVSDVQKTNTTE-THTVVETHPAPIQGLDWSHDGTVLMTLDNPGSVHLWRYD 131 (1416)
T ss_pred HhhccccceeEEEecCCce-eeeeccCCCCCceeEEecCCCCeEEEcCCCceeEEEEee
Confidence 4566667888898877544 344444588899999999999999999999999999875
No 302
>KOG1645|consensus
Probab=96.98 E-value=0.0022 Score=35.87 Aligned_cols=52 Identities=23% Similarity=0.233 Sum_probs=42.8
Q ss_pred CCCcEEEEEecCCCC-EEEEEcCCCeEEEEEcCCccccccccccccceeEEEEe
Q psy7058 31 NQRWVWDAAFTLDSK-FLLTASSDGVARLWNIETGEVDKEYSGHQKAITSLAFC 83 (85)
Q Consensus 31 ~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~ 83 (85)
+...|.+++++|... .+..++.+..|.+.|+++......+..+ ..+.+++|.
T Consensus 192 ~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~~vssy~a~-~~~wSC~wD 244 (463)
T KOG1645|consen 192 EGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSCVVSSYIAY-NQIWSCCWD 244 (463)
T ss_pred cchhhhhhccCccccceeeeeccCceEEEEecccceeeeheecc-CCceeeeec
Confidence 556688999999766 5778889999999999998888888766 788888874
No 303
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=96.96 E-value=0.021 Score=31.60 Aligned_cols=64 Identities=14% Similarity=0.119 Sum_probs=36.5
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccc
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDK 68 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 68 (85)
+.++.++.++.++.+|..+++..-+...... ....... ++..++.++.++.+..+|..+++.+.
T Consensus 66 ~~v~v~~~~g~v~a~d~~tG~~~W~~~~~~~-~~~~p~v--~~~~v~v~~~~g~l~ald~~tG~~~W 129 (377)
T TIGR03300 66 GKVYAADADGTVVALDAETGKRLWRVDLDER-LSGGVGA--DGGLVFVGTEKGEVIALDAEDGKELW 129 (377)
T ss_pred CEEEEECCCCeEEEEEccCCcEeeeecCCCC-cccceEE--cCCEEEEEcCCCEEEEEECCCCcEee
Confidence 4567777778888888877776654433111 0111111 34555566666777777766665443
No 304
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=96.90 E-value=0.017 Score=29.65 Aligned_cols=71 Identities=14% Similarity=0.119 Sum_probs=45.7
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeee-eccCC--CcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccc
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVREL-GTANQ--RWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSG 72 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 72 (85)
+.++.+..++.++.+|..+++..-+. ..... ...........+..++.+..++.+..+|.++++.+.....
T Consensus 77 ~~v~v~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tG~~~w~~~~ 150 (238)
T PF13360_consen 77 GRVYVGTSDGSLYALDAKTGKVLWSIYLTSSPPAGVRSSSSPAVDGDRLYVGTSSGKLVALDPKTGKLLWKYPV 150 (238)
T ss_dssp TEEEEEETTSEEEEEETTTSCEEEEEEE-SSCTCSTB--SEEEEETTEEEEEETCSEEEEEETTTTEEEEEEES
T ss_pred cccccccceeeeEecccCCcceeeeeccccccccccccccCceEecCEEEEEeccCcEEEEecCCCcEEEEeec
Confidence 45566667778888998888887763 32111 1111222222377778888899999999999987766554
No 305
>KOG1354|consensus
Probab=96.85 E-value=0.0082 Score=33.21 Aligned_cols=71 Identities=17% Similarity=0.307 Sum_probs=45.9
Q ss_pred ceeEEeeCCCcEEEeeCCCceee------eeeec---------cCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcC-Ccc
Q psy7058 2 GLLATTSADQTARIWNTEDFSLV------RELGT---------ANQRWVWDAAFTLDSKFLLTASSDGVARLWNIE-TGE 65 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~------~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~ 65 (85)
+.++-++..|.|++-|++..... ..... .--..|..+.|+++|+++++-+- -++++||+. ..+
T Consensus 227 n~f~YSSSKGtIrLcDmR~~aLCd~hsKlfEepedp~~rsffseiIsSISDvKFs~sGryilsRDy-ltvk~wD~nme~~ 305 (433)
T KOG1354|consen 227 NVFVYSSSKGTIRLCDMRQSALCDAHSKLFEEPEDPSSRSFFSEIISSISDVKFSHSGRYILSRDY-LTVKLWDLNMEAK 305 (433)
T ss_pred cEEEEecCCCcEEEeechhhhhhcchhhhhccccCCcchhhHHHHhhhhhceEEccCCcEEEEecc-ceeEEEeccccCC
Confidence 45677778899999998732111 11100 01135788999999999987533 489999995 445
Q ss_pred cccccccc
Q psy7058 66 VDKEYSGH 73 (85)
Q Consensus 66 ~~~~~~~~ 73 (85)
++.+++.|
T Consensus 306 pv~t~~vh 313 (433)
T KOG1354|consen 306 PVETYPVH 313 (433)
T ss_pred cceEEeeh
Confidence 55555544
No 306
>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
Probab=96.80 E-value=0.012 Score=33.98 Aligned_cols=63 Identities=17% Similarity=0.300 Sum_probs=45.7
Q ss_pred CcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCC---------------eEEEEEcCCcccccccccccc
Q psy7058 11 QTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDG---------------VARLWNIETGEVDKEYSGHQK 75 (85)
Q Consensus 11 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~i~~~~~~~~~~~~~~~~~~~ 75 (85)
..|.+|+...+..+..+. + ..+..+.|+|.+++|.+=.... .+.+||+.++..+..+.....
T Consensus 53 ~~V~~~~g~~~~~l~~~~--~-~~V~~~~fSP~~kYL~tw~~~pi~~pe~e~sp~~~~n~~~vwd~~sg~iv~sf~~~~q 129 (561)
T COG5354 53 AGVECWGGPSKAKLVRFR--H-PDVKYLDFSPNEKYLVTWSREPIIEPEIEISPFTSKNNVFVWDIASGMIVFSFNGISQ 129 (561)
T ss_pred cceEEccccchhheeeee--c-CCceecccCcccceeeeeccCCccChhhccCCccccCceeEEeccCceeEeeccccCC
Confidence 458888877766555544 2 3488899999999998765332 489999999988777775544
Q ss_pred c
Q psy7058 76 A 76 (85)
Q Consensus 76 ~ 76 (85)
+
T Consensus 130 ~ 130 (561)
T COG5354 130 P 130 (561)
T ss_pred c
Confidence 4
No 307
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=96.78 E-value=0.022 Score=29.23 Aligned_cols=65 Identities=15% Similarity=0.106 Sum_probs=44.2
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCcccccc
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKE 69 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 69 (85)
+.+++++.++.++.||..+++..-+.......... . ...+..++.+..++.++.+|..+++.+..
T Consensus 37 ~~v~~~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~-~--~~~~~~v~v~~~~~~l~~~d~~tG~~~W~ 101 (238)
T PF13360_consen 37 GRVYVASGDGNLYALDAKTGKVLWRFDLPGPISGA-P--VVDGGRVYVGTSDGSLYALDAKTGKVLWS 101 (238)
T ss_dssp TEEEEEETTSEEEEEETTTSEEEEEEECSSCGGSG-E--EEETTEEEEEETTSEEEEEETTTSCEEEE
T ss_pred CEEEEEcCCCEEEEEECCCCCEEEEeeccccccce-e--eecccccccccceeeeEecccCCcceeee
Confidence 56777789999999999999887766642211011 1 11344555555777999999988887766
No 308
>KOG1409|consensus
Probab=96.68 E-value=0.02 Score=31.69 Aligned_cols=79 Identities=16% Similarity=0.265 Sum_probs=57.3
Q ss_pred eEEeeCCCcEEEeeCC-CceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcC----Ccccccccccccccee
Q psy7058 4 LATTSADQTARIWNTE-DFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIE----TGEVDKEYSGHQKAIT 78 (85)
Q Consensus 4 l~~~~~~~~i~~~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~----~~~~~~~~~~~~~~v~ 78 (85)
+++.+.|.++++|--+ .++....+....+.+...+.++.+...++.+-.++++.-+.+. ....++.+..|...+.
T Consensus 39 v~~~s~drtvrv~lkrds~q~wpsI~~~mP~~~~~~~y~~e~~~L~vg~~ngtvtefs~sedfnkm~~~r~~~~h~~~v~ 118 (404)
T KOG1409|consen 39 VISVSEDRTVRVWLKRDSGQYWPSIYHYMPSPCSAMEYVSESRRLYVGQDNGTVTEFALSEDFNKMTFLKDYLAHQARVS 118 (404)
T ss_pred eEEccccceeeeEEeccccccCchhhhhCCCCceEeeeeccceEEEEEEecceEEEEEhhhhhhhcchhhhhhhhhccee
Confidence 6788899999998644 4555555555456778899999898899999999999888653 3445555556766666
Q ss_pred EEEE
Q psy7058 79 SLAF 82 (85)
Q Consensus 79 ~~~~ 82 (85)
.+-|
T Consensus 119 ~~if 122 (404)
T KOG1409|consen 119 AIVF 122 (404)
T ss_pred eEEe
Confidence 5554
No 309
>PRK11138 outer membrane biogenesis protein BamB; Provisional
Probab=96.68 E-value=0.041 Score=30.82 Aligned_cols=67 Identities=12% Similarity=0.097 Sum_probs=37.2
Q ss_pred eeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCcccccccc
Q psy7058 3 LLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYS 71 (85)
Q Consensus 3 ~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 71 (85)
.+..++.++.+..+|..+++..-..............+ .+..++.++.++.+...|..+++.+....
T Consensus 296 ~vy~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~sp~v--~~g~l~v~~~~G~l~~ld~~tG~~~~~~~ 362 (394)
T PRK11138 296 RIYLVDQNDRVYALDTRGGVELWSQSDLLHRLLTAPVL--YNGYLVVGDSEGYLHWINREDGRFVAQQK 362 (394)
T ss_pred EEEEEcCCCeEEEEECCCCcEEEcccccCCCcccCCEE--ECCEEEEEeCCCEEEEEECCCCCEEEEEE
Confidence 44555566666666666665433221100000111111 24566778889999999998888765554
No 310
>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates. The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.
Probab=96.66 E-value=0.052 Score=31.77 Aligned_cols=35 Identities=34% Similarity=0.541 Sum_probs=26.7
Q ss_pred EEEEEecC----CCCEEEEEcCCCeEEEEEcCCcccccc
Q psy7058 35 VWDAAFTL----DSKFLLTASSDGVARLWNIETGEVDKE 69 (85)
Q Consensus 35 ~~~~~~~~----~~~~~~~~~~~~~i~~~~~~~~~~~~~ 69 (85)
...+.++. +..++++.+.|+.+++||+.+++++.+
T Consensus 217 ~~~~~~~~~~~~~~~~l~tl~~D~~LRiW~l~t~~~~~~ 255 (547)
T PF11715_consen 217 AASLAVSSSEINDDTFLFTLSRDHTLRIWSLETGQCLAT 255 (547)
T ss_dssp EEEEEE-----ETTTEEEEEETTSEEEEEETTTTCEEEE
T ss_pred cceEEEecceeCCCCEEEEEeCCCeEEEEECCCCeEEEE
Confidence 45555555 677899999999999999999887443
No 311
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=96.50 E-value=0.047 Score=34.19 Aligned_cols=81 Identities=11% Similarity=0.165 Sum_probs=48.8
Q ss_pred CceeEEeeC------CCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcC---CCeEEEEEcCCcccccccc
Q psy7058 1 MGLLATTSA------DQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASS---DGVARLWNIETGEVDKEYS 71 (85)
Q Consensus 1 g~~l~~~~~------~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~i~~~~~~~~~~~~~~~ 71 (85)
|+++|+.+. .+.+++|+-. |.....-.. -.+--..++|.|.|.++++... ...|.+|. ++|.....|.
T Consensus 221 G~yFAVss~~~~~~~~R~iRVy~Re-G~L~stSE~-v~gLe~~l~WrPsG~lIA~~q~~~~~~~VvFfE-rNGLrhgeF~ 297 (928)
T PF04762_consen 221 GEYFAVSSVEPETGSRRVIRVYSRE-GELQSTSEP-VDGLEGALSWRPSGNLIASSQRLPDRHDVVFFE-RNGLRHGEFT 297 (928)
T ss_pred CcEEEEEEEEcCCCceeEEEEECCC-ceEEecccc-CCCccCCccCCCCCCEEEEEEEcCCCcEEEEEe-cCCcEeeeEe
Confidence 455655543 3578899855 554333222 3333467899999999988754 23455554 4454433332
Q ss_pred ----ccccceeEEEEeC
Q psy7058 72 ----GHQKAITSLAFCD 84 (85)
Q Consensus 72 ----~~~~~v~~~~~~~ 84 (85)
.....|..++||.
T Consensus 298 l~~~~~~~~v~~l~Wn~ 314 (928)
T PF04762_consen 298 LRFDPEEEKVIELAWNS 314 (928)
T ss_pred cCCCCCCceeeEEEECC
Confidence 3456888899986
No 312
>KOG2444|consensus
Probab=96.49 E-value=0.012 Score=30.65 Aligned_cols=62 Identities=23% Similarity=0.240 Sum_probs=42.3
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccCC-CcEEEEEecCCCCEEEEE--cCCCeEEEEEcCCc
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTANQ-RWVWDAAFTLDSKFLLTA--SSDGVARLWNIETG 64 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~--~~~~~i~~~~~~~~ 64 (85)
.+..++..++.++.|++...+.+..... +. .+......+..+..+... +.+..++.|++..-
T Consensus 115 ~~~c~~~~dg~ir~~n~~p~k~~g~~g~-h~~~~~e~~ivv~sd~~i~~a~~S~d~~~k~W~ve~~ 179 (238)
T KOG2444|consen 115 SLGCVGAQDGRIRACNIKPNKVLGYVGQ-HNFESGEELIVVGSDEFLKIADTSHDRVLKKWNVEKI 179 (238)
T ss_pred ceeEEeccCCceeeeccccCceeeeecc-ccCCCcceeEEecCCceEEeeccccchhhhhcchhhh
Confidence 3567888999999999887666555444 44 444555555566666666 77778888887543
No 313
>KOG1832|consensus
Probab=96.49 E-value=0.011 Score=36.82 Aligned_cols=51 Identities=22% Similarity=0.357 Sum_probs=44.9
Q ss_pred CCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEEE
Q psy7058 31 NQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSLA 81 (85)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~ 81 (85)
+....++++|+-+..+++.|...|.|++|++.+|........|+.+|+.+.
T Consensus 1100 ~~~~fTc~afs~~~~hL~vG~~~Geik~~nv~sG~~e~s~ncH~SavT~ve 1150 (1516)
T KOG1832|consen 1100 ETALFTCIAFSGGTNHLAVGSHAGEIKIFNVSSGSMEESVNCHQSAVTLVE 1150 (1516)
T ss_pred cccceeeEEeecCCceEEeeeccceEEEEEccCcccccccccccccccccc
Confidence 455688999999999999999999999999999998888888988887653
No 314
>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins. It contains a characteristic DLL sequence motif.
Probab=96.46 E-value=0.013 Score=22.47 Aligned_cols=30 Identities=17% Similarity=0.208 Sum_probs=24.7
Q ss_pred cEEEEEecCCC---CEEEEEcCCCeEEEEEcCC
Q psy7058 34 WVWDAAFTLDS---KFLLTASSDGVARLWNIET 63 (85)
Q Consensus 34 ~~~~~~~~~~~---~~~~~~~~~~~i~~~~~~~ 63 (85)
.+.++.|+|+. .+++..-..+.+.++|+++
T Consensus 2 AvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~ 34 (43)
T PF10313_consen 2 AVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRS 34 (43)
T ss_pred CeEEEEeCCCCCcccEEEEEccCCeEEEEEccc
Confidence 47889999844 5788888889999999985
No 315
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=96.43 E-value=0.034 Score=30.81 Aligned_cols=58 Identities=16% Similarity=0.274 Sum_probs=41.4
Q ss_pred EEEeeCCCceeeeeeeccCCCcEEEEEecCCCC-EEEEE-cCCCeEEEEEcCCccccccccc
Q psy7058 13 ARIWNTEDFSLVRELGTANQRWVWDAAFTLDSK-FLLTA-SSDGVARLWNIETGEVDKEYSG 72 (85)
Q Consensus 13 i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~i~~~~~~~~~~~~~~~~ 72 (85)
|=++|+.+++.+.++..+ .++.++.++.+.. .|++. ..++.+.+||..+++.+..+.+
T Consensus 271 VWv~D~~t~krv~Ri~l~--~~~~Si~Vsqd~~P~L~~~~~~~~~l~v~D~~tGk~~~~~~~ 330 (342)
T PF06433_consen 271 VWVYDLKTHKRVARIPLE--HPIDSIAVSQDDKPLLYALSAGDGTLDVYDAATGKLVRSIEQ 330 (342)
T ss_dssp EEEEETTTTEEEEEEEEE--EEESEEEEESSSS-EEEEEETTTTEEEEEETTT--EEEEE--
T ss_pred EEEEECCCCeEEEEEeCC--CccceEEEccCCCcEEEEEcCCCCeEEEEeCcCCcEEeehhc
Confidence 556788889998888753 3477899998765 44444 4578999999999998877763
No 316
>KOG2444|consensus
Probab=96.43 E-value=0.039 Score=28.92 Aligned_cols=72 Identities=17% Similarity=0.095 Sum_probs=43.8
Q ss_pred ceeEEeeCCCcEEEeeCCCc-eeeeeeeccCCCcEEEE-EecCCCCEEEEEcCCCeEEEEEcCCccccccccccc
Q psy7058 2 GLLATTSADQTARIWNTEDF-SLVRELGTANQRWVWDA-AFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQ 74 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 74 (85)
..++.|..++.+++|..... ........ ....+-++ .--.++.+..+++.++.|+.|++...+.+.....|+
T Consensus 71 ~~~~vG~~dg~v~~~n~n~~g~~~d~~~s-~~e~i~~~Ip~~~~~~~~c~~~~dg~ir~~n~~p~k~~g~~g~h~ 144 (238)
T KOG2444|consen 71 AKLMVGTSDGAVYVFNWNLEGAHSDRVCS-GEESIDLGIPNGRDSSLGCVGAQDGRIRACNIKPNKVLGYVGQHN 144 (238)
T ss_pred ceEEeecccceEEEecCCccchHHHhhhc-ccccceeccccccccceeEEeccCCceeeeccccCceeeeecccc
Confidence 45788889999999987622 11111111 11223222 222345677888999999999998777665544444
No 317
>KOG1832|consensus
Probab=96.42 E-value=0.0049 Score=38.17 Aligned_cols=61 Identities=25% Similarity=0.272 Sum_probs=50.0
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCC--CeEEEEEcCC
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSD--GVARLWNIET 63 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~i~~~~~~~ 63 (85)
++|+.|+..|.|+++++.+|........ |+..++.+.-+.+|...++.+.- ....+|++.+
T Consensus 1114 ~hL~vG~~~Geik~~nv~sG~~e~s~nc-H~SavT~vePs~dgs~~Ltsss~S~PlsaLW~~~s 1176 (1516)
T KOG1832|consen 1114 NHLAVGSHAGEIKIFNVSSGSMEESVNC-HQSAVTLVEPSVDGSTQLTSSSSSSPLSALWDASS 1176 (1516)
T ss_pred ceEEeeeccceEEEEEccCccccccccc-cccccccccccCCcceeeeeccccCchHHHhcccc
Confidence 5789999999999999999988888877 88889999988899887765432 2567788754
No 318
>KOG1354|consensus
Probab=96.37 E-value=0.033 Score=31.02 Aligned_cols=63 Identities=17% Similarity=0.234 Sum_probs=42.3
Q ss_pred CceeEEeeCCCcEEEeeCCCcee-eeeeec---cC------------CCcEEEEEecCCC--CEEEEEcCCCeEEEEEcC
Q psy7058 1 MGLLATTSADQTARIWNTEDFSL-VRELGT---AN------------QRWVWDAAFTLDS--KFLLTASSDGVARLWNIE 62 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~-~~~~~~---~~------------~~~~~~~~~~~~~--~~~~~~~~~~~i~~~~~~ 62 (85)
|++|++|..+|.+.++.-..... ...+.. .| ...|+.+.|-+++ ..++....|.+|++|-+.
T Consensus 37 Ge~LatGdkgGRVv~f~r~~~~~~ey~~~t~fqshepEFDYLkSleieEKinkIrw~~~~n~a~FLlstNdktiKlWKi~ 116 (433)
T KOG1354|consen 37 GERLATGDKGGRVVLFEREKLYKGEYNFQTEFQSHEPEFDYLKSLEIEEKINKIRWLDDGNLAEFLLSTNDKTIKLWKIR 116 (433)
T ss_pred cceEeecCCCCeEEEeecccccccceeeeeeeeccCcccchhhhhhhhhhhhhceecCCCCccEEEEecCCcceeeeeee
Confidence 68999999999999886432211 111111 01 2357889998865 457777889999999875
Q ss_pred C
Q psy7058 63 T 63 (85)
Q Consensus 63 ~ 63 (85)
.
T Consensus 117 e 117 (433)
T KOG1354|consen 117 E 117 (433)
T ss_pred c
Confidence 3
No 319
>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]
Probab=96.27 E-value=0.043 Score=32.33 Aligned_cols=59 Identities=15% Similarity=0.162 Sum_probs=43.1
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcC
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIE 62 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 62 (85)
.+++.+++.|.|++||.-.......+++ ....|..+....+|.++++.+.. .+.+-|++
T Consensus 574 GyIa~as~kGDirLyDRig~rAKtalP~-lG~aIk~idvta~Gk~ilaTCk~-yllL~d~~ 632 (776)
T COG5167 574 GYIAAASRKGDIRLYDRIGKRAKTALPG-LGDAIKHIDVTANGKHILATCKN-YLLLTDVP 632 (776)
T ss_pred ceEEEecCCCceeeehhhcchhhhcCcc-cccceeeeEeecCCcEEEEeecc-eEEEEecc
Confidence 5789999999999999764444444444 56678899999999988776665 45555653
No 320
>KOG2041|consensus
Probab=96.24 E-value=0.025 Score=34.49 Aligned_cols=60 Identities=18% Similarity=0.201 Sum_probs=44.5
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeec-cCCCcEEEEEecCCCCEEEEEcCCCeEEEEEc
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGT-ANQRWVWDAAFTLDSKFLLTASSDGVARLWNI 61 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 61 (85)
+.|-++..+|.|.+|-+-.+.-...+.. ...+.+.+++|+.+|+.++..-.||.|.+=.+
T Consensus 84 QKLTtSDt~GlIiVWmlykgsW~EEMiNnRnKSvV~SmsWn~dG~kIcIvYeDGavIVGsv 144 (1189)
T KOG2041|consen 84 QKLTTSDTSGLIIVWMLYKGSWCEEMINNRNKSVVVSMSWNLDGTKICIVYEDGAVIVGSV 144 (1189)
T ss_pred ccccccCCCceEEEEeeecccHHHHHhhCcCccEEEEEEEcCCCcEEEEEEccCCEEEEee
Confidence 3466778889999998877655443322 24567899999999999998888888766544
No 321
>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length. This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.
Probab=96.21 E-value=0.12 Score=31.12 Aligned_cols=53 Identities=19% Similarity=0.204 Sum_probs=39.4
Q ss_pred CCCcEEEeeCCCceeeeeeeccCCCcEEEEEecC--CCCEEEEEcCCCeEEEEEc
Q psy7058 9 ADQTARIWNTEDFSLVRELGTANQRWVWDAAFTL--DSKFLLTASSDGVARLWNI 61 (85)
Q Consensus 9 ~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~i~~~~~ 61 (85)
....+.+||.+.+.......-.....|.++.|.. +++.+++.+-.+.|.++.-
T Consensus 49 ~~~~LtIWD~~~~~lE~~~~f~~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~Q 103 (631)
T PF12234_consen 49 SRSELTIWDTRSGVLEYEESFSEDDPIRDLDWTSTPDGQSILAVGFPHHVLLYTQ 103 (631)
T ss_pred CCCEEEEEEcCCcEEEEeeeecCCCceeeceeeecCCCCEEEEEEcCcEEEEEEc
Confidence 3457899999987755544433467799999864 7888888888888888853
No 322
>PRK11138 outer membrane biogenesis protein BamB; Provisional
Probab=96.09 E-value=0.097 Score=29.38 Aligned_cols=66 Identities=18% Similarity=0.169 Sum_probs=43.4
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEE-EEecCCCCEEEEEcCCCeEEEEEcCCcccccccc
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTANQRWVWD-AAFTLDSKFLLTASSDGVARLWNIETGEVDKEYS 71 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 71 (85)
+.++.++.++.++.+|..+++..-+.... ..+.+ ..+ .+..++.+..++.+.-+|..+++.+..+.
T Consensus 121 ~~v~v~~~~g~l~ald~~tG~~~W~~~~~--~~~~ssP~v--~~~~v~v~~~~g~l~ald~~tG~~~W~~~ 187 (394)
T PRK11138 121 GKVYIGSEKGQVYALNAEDGEVAWQTKVA--GEALSRPVV--SDGLVLVHTSNGMLQALNESDGAVKWTVN 187 (394)
T ss_pred CEEEEEcCCCEEEEEECCCCCCcccccCC--CceecCCEE--ECCEEEEECCCCEEEEEEccCCCEeeeec
Confidence 35667778889999999999887665531 11211 111 23455566778889999998887765543
No 323
>PRK04043 tolB translocation protein TolB; Provisional
Probab=95.99 E-value=0.13 Score=29.40 Aligned_cols=54 Identities=15% Similarity=0.031 Sum_probs=35.1
Q ss_pred CCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEE-EcCC--CeEEEEEcCCcc
Q psy7058 10 DQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT-ASSD--GVARLWNIETGE 65 (85)
Q Consensus 10 ~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~i~~~~~~~~~ 65 (85)
+..|+++|+.+++...... .........|+|||+.++. .+.+ ..|.++++..+.
T Consensus 212 ~~~Iyv~dl~tg~~~~lt~--~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~dl~~g~ 268 (419)
T PRK04043 212 KPTLYKYNLYTGKKEKIAS--SQGMLVVSDVSKDGSKLLLTMAPKGQPDIYLYDTNTKT 268 (419)
T ss_pred CCEEEEEECCCCcEEEEec--CCCcEEeeEECCCCCEEEEEEccCCCcEEEEEECCCCc
Confidence 3568888988776544332 3344556789999987654 3333 467777876654
No 324
>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase. These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity
Probab=95.97 E-value=0.097 Score=27.75 Aligned_cols=61 Identities=16% Similarity=0.165 Sum_probs=41.6
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCcc
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGE 65 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 65 (85)
++.|+.|..+| +++++............ ...|..+...++-..++.-+ |+.+.++++....
T Consensus 7 ~~~L~vGt~~G-l~~~~~~~~~~~~~i~~--~~~I~ql~vl~~~~~llvLs-d~~l~~~~L~~l~ 67 (275)
T PF00780_consen 7 GDRLLVGTEDG-LYVYDLSDPSKPTRILK--LSSITQLSVLPELNLLLVLS-DGQLYVYDLDSLE 67 (275)
T ss_pred CCEEEEEECCC-EEEEEecCCccceeEee--cceEEEEEEecccCEEEEEc-CCccEEEEchhhc
Confidence 46788998888 89999833333333332 23388888888777766654 4899999986543
No 325
>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus
Probab=95.96 E-value=0.14 Score=29.40 Aligned_cols=71 Identities=15% Similarity=0.201 Sum_probs=45.6
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCCC----cEEEEEecC-------------C-CCE-EEEEcCCCeEEEEEc
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQR----WVWDAAFTL-------------D-SKF-LLTASSDGVARLWNI 61 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~----~~~~~~~~~-------------~-~~~-~~~~~~~~~i~~~~~ 61 (85)
+++.++...-|.|.++|+.++..++..++ +.. .+....-.. + ..+ ++....-|.|.+|++
T Consensus 319 ~~laA~tDslGRV~LiD~~~~~vvrmWKG-YRdAqc~wi~~~~~~~~~~~~~~~~~~~~~~~l~LvIyaprRg~lEvW~~ 397 (415)
T PF14655_consen 319 GRLAAVTDSLGRVLLIDVARGIVVRMWKG-YRDAQCGWIEVPEEGDRDRSNSNSPKSSSRFALFLVIYAPRRGILEVWSM 397 (415)
T ss_pred CCEEEEEcCCCcEEEEECCCChhhhhhcc-CccceEEEEEeecccccccccccccCCCCcceEEEEEEeccCCeEEEEec
Confidence 35667777779999999999888777765 321 111111000 0 112 345677899999999
Q ss_pred CCccccccccc
Q psy7058 62 ETGEVDKEYSG 72 (85)
Q Consensus 62 ~~~~~~~~~~~ 72 (85)
+.+..+..+..
T Consensus 398 ~~g~Rv~a~~v 408 (415)
T PF14655_consen 398 RQGPRVAAFNV 408 (415)
T ss_pred CCCCEEEEEEe
Confidence 99987776653
No 326
>KOG0882|consensus
Probab=95.91 E-value=0.039 Score=31.77 Aligned_cols=68 Identities=21% Similarity=0.280 Sum_probs=48.4
Q ss_pred eEEeeCCCcEEEeeCCC-ceeee-----eeec--------cCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCcccccc
Q psy7058 4 LATTSADQTARIWNTED-FSLVR-----ELGT--------ANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKE 69 (85)
Q Consensus 4 l~~~~~~~~i~~~d~~~-~~~~~-----~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 69 (85)
.++....|.|..|.... .+.+. .++. .......++.++|++..+.+-..|..|++++.++++..+.
T Consensus 159 ~vSiD~~gmVEyWs~e~~~qfPr~~l~~~~K~eTdLy~f~K~Kt~pts~Efsp~g~qistl~~DrkVR~F~~KtGklvqe 238 (558)
T KOG0882|consen 159 AVSIDISGMVEYWSAEGPFQFPRTNLNFELKHETDLYGFPKAKTEPTSFEFSPDGAQISTLNPDRKVRGFVFKTGKLVQE 238 (558)
T ss_pred eeeccccceeEeecCCCcccCccccccccccccchhhcccccccCccceEEccccCcccccCcccEEEEEEeccchhhhh
Confidence 45566678899998762 11111 1110 1234567899999999999999999999999999987776
Q ss_pred cc
Q psy7058 70 YS 71 (85)
Q Consensus 70 ~~ 71 (85)
+.
T Consensus 239 iD 240 (558)
T KOG0882|consen 239 ID 240 (558)
T ss_pred hh
Confidence 65
No 327
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=95.83 E-value=0.14 Score=28.51 Aligned_cols=85 Identities=13% Similarity=0.179 Sum_probs=51.0
Q ss_pred CceeEEeeCC-CcEEEeeCCC-ceeeeeeec-cCC----------CcEEEEEecCCCCEEEEEcCC-CeEEEEEcCCccc
Q psy7058 1 MGLLATTSAD-QTARIWNTED-FSLVRELGT-ANQ----------RWVWDAAFTLDSKFLLTASSD-GVARLWNIETGEV 66 (85)
Q Consensus 1 g~~l~~~~~~-~~i~~~d~~~-~~~~~~~~~-~~~----------~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~ 66 (85)
|++|+++... +.|.++-++. +........ .|. ..+....+.|+++++++.+.. -.|.+|++.+++.
T Consensus 100 g~~vf~AnY~~g~v~v~p~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DLG~Dri~~y~~~dg~L 179 (346)
T COG2706 100 GRFVFVANYHSGSVSVYPLQADGSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPDLGTDRIFLYDLDDGKL 179 (346)
T ss_pred CCEEEEEEccCceEEEEEcccCCccccceeeeecCCCCCCccccCCccceeeeCCCCCEEEEeecCCceEEEEEcccCcc
Confidence 3566666644 6788887754 322111110 021 227788899999999887653 4789999987753
Q ss_pred ccccc---ccccceeEEEEeCC
Q psy7058 67 DKEYS---GHQKAITSLAFCDF 85 (85)
Q Consensus 67 ~~~~~---~~~~~v~~~~~~~~ 85 (85)
...-. .....-+.|.|+|+
T Consensus 180 ~~~~~~~v~~G~GPRHi~FHpn 201 (346)
T COG2706 180 TPADPAEVKPGAGPRHIVFHPN 201 (346)
T ss_pred ccccccccCCCCCcceEEEcCC
Confidence 32111 23456677888774
No 328
>KOG0309|consensus
Probab=95.81 E-value=0.0093 Score=36.20 Aligned_cols=60 Identities=17% Similarity=0.296 Sum_probs=44.1
Q ss_pred eEEeeCCCcEEEeeCCCceee-eeeeccCCCcEEEEEecC-CCCEEEEEcCCCeEEEEEcCCc
Q psy7058 4 LATTSADQTARIWNTEDFSLV-RELGTANQRWVWDAAFTL-DSKFLLTASSDGVARLWNIETG 64 (85)
Q Consensus 4 l~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~ 64 (85)
+.+.+....+.+||.+.+..+ ..+++ +...++.+.|+. ....+.+.+.|+++++|+....
T Consensus 173 vlasshg~~i~vwd~r~gs~pl~s~K~-~vs~vn~~~fnr~~~s~~~s~~~d~tvkfw~y~kS 234 (1081)
T KOG0309|consen 173 VLASSHGNDIFVWDLRKGSTPLCSLKG-HVSSVNSIDFNRFKYSEIMSSSNDGTVKFWDYSKS 234 (1081)
T ss_pred hhhhccCCceEEEeccCCCcceEEecc-cceeeehHHHhhhhhhhhcccCCCCceeeeccccc
Confidence 345566678999999977554 44454 777788888876 3456778889999999997644
No 329
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=95.75 E-value=0.26 Score=31.18 Aligned_cols=56 Identities=14% Similarity=0.151 Sum_probs=38.2
Q ss_pred eeEEeeCCCcEEEe----eCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEE
Q psy7058 3 LLATTSADQTARIW----NTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWN 60 (85)
Q Consensus 3 ~l~~~~~~~~i~~~----d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 60 (85)
.++.+..+|.|.+. +..+.. ....+.-...|.+++||||+..++..+.++.+.+..
T Consensus 89 ~l~~~~~~Gdi~~~~~~~~~~~~~--~E~VG~vd~GI~a~~WSPD~Ella~vT~~~~l~~mt 148 (928)
T PF04762_consen 89 SLCIALASGDIILVREDPDPDEDE--IEIVGSVDSGILAASWSPDEELLALVTGEGNLLLMT 148 (928)
T ss_pred cEEEEECCceEEEEEccCCCCCce--eEEEEEEcCcEEEEEECCCcCEEEEEeCCCEEEEEe
Confidence 46667778888887 433222 122222345699999999999999888888776654
No 330
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=95.75 E-value=0.15 Score=28.23 Aligned_cols=61 Identities=16% Similarity=0.366 Sum_probs=39.1
Q ss_pred CceeEEee-CCCcEEEeeCC--Cce--eeeeeeccCCCcEEEEEecCCCCEEEEEc-CCCeEEEEEcC
Q psy7058 1 MGLLATTS-ADQTARIWNTE--DFS--LVRELGTANQRWVWDAAFTLDSKFLLTAS-SDGVARLWNIE 62 (85)
Q Consensus 1 g~~l~~~~-~~~~i~~~d~~--~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~ 62 (85)
|++|.++. .+..|.+|++. +++ .+..+.. .......+.++|+|++++.+. .++.|.+|++.
T Consensus 256 g~~lyvsnr~~~sI~vf~~d~~~g~l~~~~~~~~-~G~~Pr~~~~s~~g~~l~Va~~~s~~v~vf~~d 322 (345)
T PF10282_consen 256 GRFLYVSNRGSNSISVFDLDPATGTLTLVQTVPT-GGKFPRHFAFSPDGRYLYVANQDSNTVSVFDID 322 (345)
T ss_dssp SSEEEEEECTTTEEEEEEECTTTTTEEEEEEEEE-SSSSEEEEEE-TTSSEEEEEETTTTEEEEEEEE
T ss_pred CCEEEEEeccCCEEEEEEEecCCCceEEEEEEeC-CCCCccEEEEeCCCCEEEEEecCCCeEEEEEEe
Confidence 35555444 45678999983 233 2333333 334478899999999988776 46789999774
No 331
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=95.69 E-value=0.15 Score=27.98 Aligned_cols=79 Identities=18% Similarity=0.221 Sum_probs=50.3
Q ss_pred eEEeeCCC-cEEEeeCCCceeeeeeeccCCCcE-EEEEecCCCCEEEEEc-----CCCeEEEEEcC-Ccccccccccccc
Q psy7058 4 LATTSADQ-TARIWNTEDFSLVRELGTANQRWV-WDAAFTLDSKFLLTAS-----SDGVARLWNIE-TGEVDKEYSGHQK 75 (85)
Q Consensus 4 l~~~~~~~-~i~~~d~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-----~~~~i~~~~~~-~~~~~~~~~~~~~ 75 (85)
++.+.+-+ ...+||..+++....+........ =.-.|++||+++++.- ..|.|-+||.. .-+.+.++..+.-
T Consensus 20 vafaRRPG~~~~v~D~~~g~~~~~~~a~~gRHFyGHg~fs~dG~~LytTEnd~~~g~G~IgVyd~~~~~~ri~E~~s~GI 99 (305)
T PF07433_consen 20 VAFARRPGTFALVFDCRTGQLLQRLWAPPGRHFYGHGVFSPDGRLLYTTENDYETGRGVIGVYDAARGYRRIGEFPSHGI 99 (305)
T ss_pred EEEEeCCCcEEEEEEcCCCceeeEEcCCCCCEEecCEEEcCCCCEEEEeccccCCCcEEEEEEECcCCcEEEeEecCCCc
Confidence 44444444 467899999988877665222112 2467899999998753 35789999998 4455566665543
Q ss_pred ceeEEEE
Q psy7058 76 AITSLAF 82 (85)
Q Consensus 76 ~v~~~~~ 82 (85)
.-..+.+
T Consensus 100 GPHel~l 106 (305)
T PF07433_consen 100 GPHELLL 106 (305)
T ss_pred ChhhEEE
Confidence 3334433
No 332
>KOG4640|consensus
Probab=95.60 E-value=0.054 Score=32.31 Aligned_cols=53 Identities=9% Similarity=-0.002 Sum_probs=43.5
Q ss_pred CCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCcccccccccccccee-EEEEeCC
Q psy7058 32 QRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAIT-SLAFCDF 85 (85)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~ 85 (85)
...+..+.|+|....+|++..+|.+.+..+. .+.+.++..+...++ +++|.|.
T Consensus 20 ~~~i~~~ewnP~~dLiA~~t~~gelli~R~n-~qRlwtip~p~~~v~~sL~W~~D 73 (665)
T KOG4640|consen 20 PINIKRIEWNPKMDLIATRTEKGELLIHRLN-WQRLWTIPIPGENVTASLCWRPD 73 (665)
T ss_pred ccceEEEEEcCccchhheeccCCcEEEEEec-cceeEeccCCCCccceeeeecCC
Confidence 4558899999999999999999999888887 667777776666676 8888763
No 333
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=95.40 E-value=0.4 Score=30.85 Aligned_cols=62 Identities=15% Similarity=0.113 Sum_probs=39.7
Q ss_pred eeEEeeCCCcEEEeeCCCceeeeeeecc--------------CCCcEEEEEecCCCCEE-EEEcCCCeEEEEEcCCcc
Q psy7058 3 LLATTSADQTARIWNTEDFSLVRELGTA--------------NQRWVWDAAFTLDSKFL-LTASSDGVARLWNIETGE 65 (85)
Q Consensus 3 ~l~~~~~~~~i~~~d~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~~~~~~~ 65 (85)
.+++...++.|++||..++.... +.+. .-.....++++|++..+ ++-..++.|++||+.++.
T Consensus 697 LyVad~~~~~I~v~d~~~g~v~~-~~G~G~~~~~~g~~~~~~~~~~P~GIavspdG~~LYVADs~n~~Irv~D~~tg~ 773 (1057)
T PLN02919 697 VYIAMAGQHQIWEYNISDGVTRV-FSGDGYERNLNGSSGTSTSFAQPSGISLSPDLKELYIADSESSSIRALDLKTGG 773 (1057)
T ss_pred EEEEECCCCeEEEEECCCCeEEE-EecCCccccCCCCccccccccCccEEEEeCCCCEEEEEECCCCeEEEEECCCCc
Confidence 45566677889999987654321 1100 01234578999998854 455567899999987653
No 334
>KOG4499|consensus
Probab=95.39 E-value=0.18 Score=26.94 Aligned_cols=46 Identities=17% Similarity=0.193 Sum_probs=37.3
Q ss_pred EEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEEEEe
Q psy7058 38 AAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSLAFC 83 (85)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~ 83 (85)
++...+|.+.++.=..++|..+|..+++.+.++.-....|++++|-
T Consensus 217 m~ID~eG~L~Va~~ng~~V~~~dp~tGK~L~eiklPt~qitsccFg 262 (310)
T KOG4499|consen 217 MTIDTEGNLYVATFNGGTVQKVDPTTGKILLEIKLPTPQITSCCFG 262 (310)
T ss_pred ceEccCCcEEEEEecCcEEEEECCCCCcEEEEEEcCCCceEEEEec
Confidence 4445577777777677899999999999999888778899999883
No 335
>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals. The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.
Probab=95.33 E-value=0.25 Score=28.15 Aligned_cols=61 Identities=15% Similarity=0.200 Sum_probs=42.4
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeecc-------CCCcEEEEEec-----CCC---CEEEEEcCCCeEEEEEcC
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTA-------NQRWVWDAAFT-----LDS---KFLLTASSDGVARLWNIE 62 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~-------~~~~~~~~~~~-----~~~---~~~~~~~~~~~i~~~~~~ 62 (85)
.+++.|..+|.+.+.|++....+..-... ....+.++.|+ .|+ -.++.|...|.+.+|.+.
T Consensus 98 GFvaigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~ySSi~L~vGTn~G~v~~fkIl 173 (395)
T PF08596_consen 98 GFVAIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSVMTLGGDGYSSICLLVGTNSGNVLTFKIL 173 (395)
T ss_dssp SEEEEEETTSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEEEE-TTSSSEEEEEEEEETTSEEEEEEEE
T ss_pred cEEEEEecCCcEEEEECCCCeEEeeccccccccccccccCeeEEEEEEEecCCCcccceEEEEEeCCCCEEEEEEe
Confidence 47899999999999999988776653321 23456677665 233 356778888999999875
No 336
>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....
Probab=95.28 E-value=0.093 Score=29.09 Aligned_cols=52 Identities=19% Similarity=0.222 Sum_probs=37.0
Q ss_pred CcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCcc
Q psy7058 11 QTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGE 65 (85)
Q Consensus 11 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 65 (85)
+...++|+.+++....... ...+....|+|+|+.++.. .++.|.+.+...+.
T Consensus 23 ~~y~i~d~~~~~~~~l~~~--~~~~~~~~~sP~g~~~~~v-~~~nly~~~~~~~~ 74 (353)
T PF00930_consen 23 GDYYIYDIETGEITPLTPP--PPKLQDAKWSPDGKYIAFV-RDNNLYLRDLATGQ 74 (353)
T ss_dssp EEEEEEETTTTEEEESS-E--ETTBSEEEE-SSSTEEEEE-ETTEEEEESSTTSE
T ss_pred eeEEEEecCCCceEECcCC--ccccccceeecCCCeeEEE-ecCceEEEECCCCC
Confidence 4678899988665444332 4457889999999998887 45689999876553
No 337
>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus
Probab=95.26 E-value=0.26 Score=28.33 Aligned_cols=41 Identities=17% Similarity=0.196 Sum_probs=33.6
Q ss_pred CCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccc
Q psy7058 32 QRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSG 72 (85)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 72 (85)
...+.++..+|++++.++.+.-|.|.++|+..+..++.+++
T Consensus 307 ~R~~~~i~~sP~~~laA~tDslGRV~LiD~~~~~vvrmWKG 347 (415)
T PF14655_consen 307 KREGESICLSPSGRLAAVTDSLGRVLLIDVARGIVVRMWKG 347 (415)
T ss_pred CceEEEEEECCCCCEEEEEcCCCcEEEEECCCChhhhhhcc
Confidence 34578899999999999888889999999988876665553
No 338
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=95.19 E-value=0.25 Score=27.36 Aligned_cols=84 Identities=13% Similarity=0.156 Sum_probs=48.7
Q ss_pred CceeEEee-CCCcEEEeeCCC-ceeeee---ee---------ccCCCcEEEEEecCCCCEEEEEcC-CCeEEEEEcCCcc
Q psy7058 1 MGLLATTS-ADQTARIWNTED-FSLVRE---LG---------TANQRWVWDAAFTLDSKFLLTASS-DGVARLWNIETGE 65 (85)
Q Consensus 1 g~~l~~~~-~~~~i~~~d~~~-~~~~~~---~~---------~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~ 65 (85)
+++|+++. .++.+.++++.. +..... .. .........+.++|++++++..+. ...|.+|++....
T Consensus 98 g~~l~vany~~g~v~v~~l~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~dlG~D~v~~~~~~~~~ 177 (345)
T PF10282_consen 98 GRFLYVANYGGGSVSVFPLDDDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYVPDLGADRVYVYDIDDDT 177 (345)
T ss_dssp SSEEEEEETTTTEEEEEEECTTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEEEETTTTEEEEEEE-TTS
T ss_pred CCEEEEEEccCCeEEEEEccCCcccceeeeecccCCCCCcccccccccceeEEECCCCCEEEEEecCCCEEEEEEEeCCC
Confidence 35566666 478899999875 333222 11 012345788999999998877654 3489999987554
Q ss_pred c-c---cccc-ccccceeEEEEeC
Q psy7058 66 V-D---KEYS-GHQKAITSLAFCD 84 (85)
Q Consensus 66 ~-~---~~~~-~~~~~v~~~~~~~ 84 (85)
. + ..+. .....-+.+.|+|
T Consensus 178 ~~l~~~~~~~~~~G~GPRh~~f~p 201 (345)
T PF10282_consen 178 GKLTPVDSIKVPPGSGPRHLAFSP 201 (345)
T ss_dssp -TEEEEEEEECSTTSSEEEEEE-T
T ss_pred ceEEEeeccccccCCCCcEEEEcC
Confidence 1 1 1111 2334556777766
No 339
>KOG1008|consensus
Probab=95.13 E-value=0.0077 Score=35.81 Aligned_cols=79 Identities=14% Similarity=0.285 Sum_probs=48.0
Q ss_pred eeEEeeCCCcEEEeeCCCcee-eeeeeccCCCcEEEEEecC-CCCEEEEEcCCCeEEEEE-cCCc-ccccccccccc---
Q psy7058 3 LLATTSADQTARIWNTEDFSL-VRELGTANQRWVWDAAFTL-DSKFLLTASSDGVARLWN-IETG-EVDKEYSGHQK--- 75 (85)
Q Consensus 3 ~l~~~~~~~~i~~~d~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~-~~~~-~~~~~~~~~~~--- 75 (85)
++++|.....+.++|++-... ...+. ...+..+.+.| .+.++++.. ++.+.+|| .++- ++++.+...+.
T Consensus 168 lvlaGm~sr~~~ifdlRqs~~~~~svn---Tk~vqG~tVdp~~~nY~cs~~-dg~iAiwD~~rnienpl~~i~~~~N~~~ 243 (783)
T KOG1008|consen 168 LVLAGMTSRSVHIFDLRQSLDSVSSVN---TKYVQGITVDPFSPNYFCSNS-DGDIAIWDTYRNIENPLQIILRNENKKP 243 (783)
T ss_pred hhhcccccchhhhhhhhhhhhhhhhhh---hhhcccceecCCCCCceeccc-cCceeeccchhhhccHHHHHhhCCCCcc
Confidence 456666667788888772221 12221 23456677888 777777765 89999999 3332 34444443333
Q ss_pred -ceeEEEEeCC
Q psy7058 76 -AITSLAFCDF 85 (85)
Q Consensus 76 -~v~~~~~~~~ 85 (85)
.+..++|.|.
T Consensus 244 ~~l~~~aycPt 254 (783)
T KOG1008|consen 244 KQLFALAYCPT 254 (783)
T ss_pred cceeeEEeccC
Confidence 3788888773
No 340
>KOG0882|consensus
Probab=95.05 E-value=0.0089 Score=34.15 Aligned_cols=62 Identities=13% Similarity=0.257 Sum_probs=46.1
Q ss_pred ceeEEeeCCCcEEEeeCCC--cee-eeeeeccCCCcEEEEEecCCCCEEEEEcC-CCeEEEEEcCCc
Q psy7058 2 GLLATTSADQTARIWNTED--FSL-VRELGTANQRWVWDAAFTLDSKFLLTASS-DGVARLWNIETG 64 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~ 64 (85)
+++++++.|+.++.|.-.. +.. +..+.. |-..+.+++.+.++..+.+.+. |+.++++|+.+-
T Consensus 21 ~fiiqASlDGh~KFWkKs~isGvEfVKhFra-HL~~I~sl~~S~dg~L~~Sv~d~Dhs~KvfDvEn~ 86 (558)
T KOG0882|consen 21 KFIIQASLDGHKKFWKKSRISGVEFVKHFRA-HLGVILSLAVSYDGWLFRSVEDPDHSVKVFDVENF 86 (558)
T ss_pred heEEeeecchhhhhcCCCCccceeehhhhHH-HHHHHHhhhccccceeEeeccCcccceeEEEeecc
Confidence 4678999999999998543 211 222222 6677888999999999999777 999999988643
No 341
>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates. The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.
Probab=94.87 E-value=0.09 Score=30.85 Aligned_cols=26 Identities=35% Similarity=0.464 Sum_probs=22.0
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeee
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVREL 27 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~ 27 (85)
.++++-+.|+.+++||+.+++.+...
T Consensus 231 ~~l~tl~~D~~LRiW~l~t~~~~~~~ 256 (547)
T PF11715_consen 231 TFLFTLSRDHTLRIWSLETGQCLATI 256 (547)
T ss_dssp TEEEEEETTSEEEEEETTTTCEEEEE
T ss_pred CEEEEEeCCCeEEEEECCCCeEEEEe
Confidence 46789999999999999999885543
No 342
>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin. These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus
Probab=94.87 E-value=0.1 Score=27.17 Aligned_cols=28 Identities=25% Similarity=0.649 Sum_probs=23.1
Q ss_pred ecCCCCEEEEEcCCCeEEEEEcCCcccc
Q psy7058 40 FTLDSKFLLTASSDGVARLWNIETGEVD 67 (85)
Q Consensus 40 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 67 (85)
+..++.++...+.+|.+++||+.+.+..
T Consensus 18 l~~~~~~Ll~iT~~G~l~vWnl~~~k~~ 45 (219)
T PF07569_consen 18 LECNGSYLLAITSSGLLYVWNLKKGKAV 45 (219)
T ss_pred EEeCCCEEEEEeCCCeEEEEECCCCeec
Confidence 3447888999999999999999887643
No 343
>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=94.81 E-value=0.12 Score=28.65 Aligned_cols=68 Identities=13% Similarity=0.253 Sum_probs=42.8
Q ss_pred eeEEeeCCCcEEEeeCCCcee------eeee--ec-------cCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCcc-c
Q psy7058 3 LLATTSADQTARIWNTEDFSL------VREL--GT-------ANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGE-V 66 (85)
Q Consensus 3 ~l~~~~~~~~i~~~d~~~~~~------~~~~--~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~ 66 (85)
.+.-++..|.|++-|++.... .... .+ .-...|..+.|++.|+++++-+. -++.+||++..+ +
T Consensus 236 ~fmYSsSkG~Ikl~DlRq~alcdn~~klfe~~~D~v~~~ff~eivsSISD~kFs~ngryIlsRdy-ltvkiwDvnm~k~p 314 (460)
T COG5170 236 VFMYSSSKGEIKLNDLRQSALCDNSKKLFELTIDGVDVDFFEEIVSSISDFKFSDNGRYILSRDY-LTVKIWDVNMAKNP 314 (460)
T ss_pred eEEEecCCCcEEehhhhhhhhccCchhhhhhccCcccchhHHHHhhhhcceEEcCCCcEEEEecc-ceEEEEecccccCC
Confidence 344566678899988873211 1111 11 11245788999999999887543 489999998653 4
Q ss_pred ccccc
Q psy7058 67 DKEYS 71 (85)
Q Consensus 67 ~~~~~ 71 (85)
+.++.
T Consensus 315 ikTi~ 319 (460)
T COG5170 315 IKTIP 319 (460)
T ss_pred ceeec
Confidence 44443
No 344
>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins. Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].
Probab=94.77 E-value=0.57 Score=29.29 Aligned_cols=78 Identities=18% Similarity=0.142 Sum_probs=48.7
Q ss_pred eEEeeCCCcEEEeeCCCce--eeee-eec-cCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccc-ccccccccee
Q psy7058 4 LATTSADQTARIWNTEDFS--LVRE-LGT-ANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDK-EYSGHQKAIT 78 (85)
Q Consensus 4 l~~~~~~~~i~~~d~~~~~--~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~v~ 78 (85)
-+.|-.+..+..||.+-.. .+.. ... .......|++-..+| +++.|+.+|.||+||- .++..+ .+++-..+|.
T Consensus 545 tflGls~n~lfriDpR~~~~k~v~~~~k~Y~~~~~Fs~~aTt~~G-~iavgs~~G~IRLyd~-~g~~AKT~lp~lG~pI~ 622 (794)
T PF08553_consen 545 TFLGLSDNSLFRIDPRLSGNKLVDSQSKQYSSKNNFSCFATTEDG-YIAVGSNKGDIRLYDR-LGKRAKTALPGLGDPII 622 (794)
T ss_pred eEEEECCCceEEeccCCCCCceeeccccccccCCCceEEEecCCc-eEEEEeCCCcEEeecc-cchhhhhcCCCCCCCee
Confidence 3556677889999988432 2211 111 123346666655555 6788999999999994 333333 3556678888
Q ss_pred EEEEe
Q psy7058 79 SLAFC 83 (85)
Q Consensus 79 ~~~~~ 83 (85)
.+..+
T Consensus 623 ~iDvt 627 (794)
T PF08553_consen 623 GIDVT 627 (794)
T ss_pred EEEec
Confidence 77654
No 345
>KOG1920|consensus
Probab=94.72 E-value=0.37 Score=31.25 Aligned_cols=71 Identities=13% Similarity=0.171 Sum_probs=41.8
Q ss_pred CcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEc---CCCeEEEEEcCCccc----cccccccccceeEEEEe
Q psy7058 11 QTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTAS---SDGVARLWNIETGEV----DKEYSGHQKAITSLAFC 83 (85)
Q Consensus 11 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~i~~~~~~~~~~----~~~~~~~~~~v~~~~~~ 83 (85)
..+++||.. +..-..-.. ....-.++.|-|.|..+++-. .+..|.+|.-+ |.. ...++....++..++|+
T Consensus 222 RkirV~drE-g~Lns~se~-~~~l~~~LsWkPsgs~iA~iq~~~sd~~IvffErN-GL~hg~f~l~~p~de~~ve~L~Wn 298 (1265)
T KOG1920|consen 222 RKIRVYDRE-GALNSTSEP-VEGLQHSLSWKPSGSLIAAIQCKTSDSDIVFFERN-GLRHGEFVLPFPLDEKEVEELAWN 298 (1265)
T ss_pred eeEEEeccc-chhhcccCc-ccccccceeecCCCCeEeeeeecCCCCcEEEEecC-CccccccccCCcccccchheeeec
Confidence 789999976 333221111 223346789999999988753 34568777643 322 22333344457778886
Q ss_pred C
Q psy7058 84 D 84 (85)
Q Consensus 84 ~ 84 (85)
.
T Consensus 299 s 299 (1265)
T KOG1920|consen 299 S 299 (1265)
T ss_pred C
Confidence 4
No 346
>PRK02888 nitrous-oxide reductase; Validated
Probab=94.72 E-value=0.53 Score=28.63 Aligned_cols=54 Identities=7% Similarity=0.123 Sum_probs=39.6
Q ss_pred CCcEEEeeCCC-----ceeeeeeeccCCCcEEEEEecCCCCEEEEEc-CCCeEEEEEcCCcc
Q psy7058 10 DQTARIWNTED-----FSLVRELGTANQRWVWDAAFTLDSKFLLTAS-SDGVARLWNIETGE 65 (85)
Q Consensus 10 ~~~i~~~d~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~ 65 (85)
++.+.+.|..+ .+....+.. ......+.++|||++++..+ .+..+.+.|+.+.+
T Consensus 295 gn~V~VID~~t~~~~~~~v~~yIPV--GKsPHGV~vSPDGkylyVanklS~tVSVIDv~k~k 354 (635)
T PRK02888 295 GSKVPVVDGRKAANAGSALTRYVPV--PKNPHGVNTSPDGKYFIANGKLSPTVTVIDVRKLD 354 (635)
T ss_pred CCEEEEEECCccccCCcceEEEEEC--CCCccceEECCCCCEEEEeCCCCCcEEEEEChhhh
Confidence 46788999887 344444443 33467899999999877554 58899999997754
No 347
>KOG2079|consensus
Probab=94.69 E-value=0.45 Score=30.67 Aligned_cols=54 Identities=19% Similarity=0.233 Sum_probs=38.5
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCC---CcEEEEEecCCCCEEEEEcCCCe
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQ---RWVWDAAFTLDSKFLLTASSDGV 55 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 55 (85)
|..++.|-.+|.|.+||+..++....+.. +. ..+..+.+..+++.+++++..|.
T Consensus 142 g~~l~~G~~~G~V~v~D~~~~k~l~~i~e-~~ap~t~vi~v~~t~~nS~llt~D~~Gs 198 (1206)
T KOG2079|consen 142 GSLLLAGLGDGHVTVWDMHRAKILKVITE-HGAPVTGVIFVGRTSQNSKLLTSDTGGS 198 (1206)
T ss_pred CceeccccCCCcEEEEEccCCcceeeeee-cCCccceEEEEEEeCCCcEEEEccCCCc
Confidence 46788888999999999998877776654 22 23444555556667777777775
No 348
>KOG3617|consensus
Probab=94.59 E-value=0.032 Score=34.76 Aligned_cols=74 Identities=14% Similarity=0.115 Sum_probs=50.8
Q ss_pred CCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEEEEeCC
Q psy7058 9 ADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSLAFCDF 85 (85)
Q Consensus 9 ~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 85 (85)
+.|.+.+|- .+|++...+. ++-.+.+++|+|..-.++.+=.-|.+.+|.....+....-..|..+|.-+.|||.
T Consensus 39 r~GSVtIfa-dtGEPqr~Vt--~P~hatSLCWHpe~~vLa~gwe~g~~~v~~~~~~e~htv~~th~a~i~~l~wS~~ 112 (1416)
T KOG3617|consen 39 RGGSVTIFA-DTGEPQRDVT--YPVHATSLCWHPEEFVLAQGWEMGVSDVQKTNTTETHTVVETHPAPIQGLDWSHD 112 (1416)
T ss_pred CCceEEEEe-cCCCCCcccc--cceehhhhccChHHHHHhhccccceeEEEecCCceeeeeccCCCCCceeEEecCC
Confidence 344555542 3444333222 3334678999999888888888899999998766655555568889999999874
No 349
>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex. Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm
Probab=94.53 E-value=0.47 Score=27.19 Aligned_cols=51 Identities=16% Similarity=0.226 Sum_probs=36.4
Q ss_pred CcEEEEEecCCCCEEEEEcCCCeEEEEEcCCcccccccccc-ccceeEEEEe
Q psy7058 33 RWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGH-QKAITSLAFC 83 (85)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~v~~~~~~ 83 (85)
+++..+++||++++++....+|.+.+....-.+.+..+... ......|.|.
T Consensus 217 ~~i~~iavSpng~~iAl~t~~g~l~v~ssDf~~~~~e~~~~~~~~p~~~~WC 268 (410)
T PF04841_consen 217 GPIIKIAVSPNGKFIALFTDSGNLWVVSSDFSEKLCEFDTDSKSPPKQMAWC 268 (410)
T ss_pred CCeEEEEECCCCCEEEEEECCCCEEEEECcccceeEEeecCcCCCCcEEEEE
Confidence 56999999999999999989999988876555544444433 2344555553
No 350
>KOG1008|consensus
Probab=94.49 E-value=0.012 Score=35.12 Aligned_cols=56 Identities=11% Similarity=0.310 Sum_probs=39.7
Q ss_pred CCCcEEEeeCCCc--eeeee--eeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCc
Q psy7058 9 ADQTARIWNTEDF--SLVRE--LGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETG 64 (85)
Q Consensus 9 ~~~~i~~~d~~~~--~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 64 (85)
.|..+.+||..+. .+... +........++++|-.+.+.+.+|...+.+.++|++..
T Consensus 127 nds~~~Iwdi~s~ltvPke~~~fs~~~l~gqns~cwlrd~klvlaGm~sr~~~ifdlRqs 186 (783)
T KOG1008|consen 127 NDSSLKIWDINSLLTVPKESPLFSSSTLDGQNSVCWLRDTKLVLAGMTSRSVHIFDLRQS 186 (783)
T ss_pred ccCCccceecccccCCCccccccccccccCccccccccCcchhhcccccchhhhhhhhhh
Confidence 4567999999876 22221 22213344678899888889999999999999999843
No 351
>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat. This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).
Probab=94.36 E-value=0.11 Score=19.13 Aligned_cols=31 Identities=13% Similarity=0.083 Sum_probs=21.4
Q ss_pred CCCCEEEEEc-CCCeEEEEEcCCccccccccc
Q psy7058 42 LDSKFLLTAS-SDGVARLWNIETGEVDKEYSG 72 (85)
Q Consensus 42 ~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~ 72 (85)
|+++.++.+. .++.|.++|..+++.+..+..
T Consensus 1 pd~~~lyv~~~~~~~v~~id~~~~~~~~~i~v 32 (42)
T TIGR02276 1 PDGTKLYVTNSGSNTVSVIDTATNKVIATIPV 32 (42)
T ss_pred CCCCEEEEEeCCCCEEEEEECCCCeEEEEEEC
Confidence 4566555544 577899999988777666654
No 352
>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
Probab=94.35 E-value=0.36 Score=28.47 Aligned_cols=73 Identities=11% Similarity=0.180 Sum_probs=44.2
Q ss_pred CcEEEeeCCCceeeeeeeccCCC--cEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccc-cccceeEEEEeC
Q psy7058 11 QTARIWNTEDFSLVRELGTANQR--WVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSG-HQKAITSLAFCD 84 (85)
Q Consensus 11 ~~i~~~d~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~v~~~~~~~ 84 (85)
..+.+||..++..+..+...... ...-+.|+-+..+++-. -...+.|+++........+.. ....+...+|+|
T Consensus 108 n~~~vwd~~sg~iv~sf~~~~q~~~~Wp~~k~s~~D~y~ARv-v~~sl~i~e~t~n~~~~p~~~lr~~gi~dFsisP 183 (561)
T COG5354 108 NNVFVWDIASGMIVFSFNGISQPYLGWPVLKFSIDDKYVARV-VGSSLYIHEITDNIEEHPFKNLRPVGILDFSISP 183 (561)
T ss_pred CceeEEeccCceeEeeccccCCcccccceeeeeecchhhhhh-ccCeEEEEecCCccccCchhhccccceeeEEecC
Confidence 36899999999998887762222 22367788888777655 344788888622211111211 124566666665
No 353
>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3
Probab=94.05 E-value=0.43 Score=24.98 Aligned_cols=48 Identities=13% Similarity=0.227 Sum_probs=33.7
Q ss_pred ceeEEeeCCCcEEEeeCCCc--eeeeeeeccCCCcEEEEEecCCCCEEEEEc
Q psy7058 2 GLLATTSADQTARIWNTEDF--SLVRELGTANQRWVWDAAFTLDSKFLLTAS 51 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 51 (85)
+.|..+.....|.+|++... +...++. .-+.+..+..+..|+++++--
T Consensus 29 d~Lfva~~g~~Vev~~l~~~~~~~~~~F~--Tv~~V~~l~y~~~GDYlvTlE 78 (215)
T PF14761_consen 29 DALFVAASGCKVEVYDLEQEECPLLCTFS--TVGRVLQLVYSEAGDYLVTLE 78 (215)
T ss_pred ceEEEEcCCCEEEEEEcccCCCceeEEEc--chhheeEEEeccccceEEEEE
Confidence 34555566678999998832 3344444 346789999999999999864
No 354
>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases. The alignment model contains an 8-bladed beta-propeller.
Probab=94.01 E-value=0.61 Score=27.30 Aligned_cols=69 Identities=14% Similarity=0.096 Sum_probs=44.6
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccCC-----CcEE--EEEecCCCCEEEEEcCCCeEEEEEcCCcccccccc
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTANQ-----RWVW--DAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYS 71 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~-----~~~~--~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 71 (85)
+.+..++.++.++-.|..+++..-+...... ..+. .+... ++..++.++.++.+.-+|.++++.+..+.
T Consensus 62 g~vy~~~~~g~l~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~g~~~~-~~~~V~v~~~~g~v~AlD~~TG~~~W~~~ 137 (488)
T cd00216 62 GDMYFTTSHSALFALDAATGKVLWRYDPKLPADRGCCDVVNRGVAYW-DPRKVFFGTFDGRLVALDAETGKQVWKFG 137 (488)
T ss_pred CEEEEeCCCCcEEEEECCCChhhceeCCCCCccccccccccCCcEEc-cCCeEEEecCCCeEEEEECCCCCEeeeec
Confidence 4566777789999999998887665543111 0000 01111 22567777888999999999888776554
No 355
>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=93.91 E-value=0.48 Score=26.47 Aligned_cols=31 Identities=32% Similarity=0.501 Sum_probs=21.9
Q ss_pred CCCcEEEEEecCCCCEEEEEcCCCeEEEEEcC
Q psy7058 31 NQRWVWDAAFTLDSKFLLTASSDGVARLWNIE 62 (85)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 62 (85)
|...++++.++.|...++++ .+-.|.+|++.
T Consensus 171 H~yhiNSiS~NsD~et~lSa-DdLrINLWnl~ 201 (460)
T COG5170 171 HPYHINSISFNSDKETLLSA-DDLRINLWNLE 201 (460)
T ss_pred ceeEeeeeeecCchheeeec-cceeeeecccc
Confidence 45568889998888777765 45567777653
No 356
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=93.76 E-value=0.76 Score=26.77 Aligned_cols=38 Identities=24% Similarity=0.348 Sum_probs=24.1
Q ss_pred CCEEEEEcCCCeEEEEEcCCccccccccccccceeEEEEeC
Q psy7058 44 SKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSLAFCD 84 (85)
Q Consensus 44 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 84 (85)
|..++..+.+ .|.+||+.+++.+..+... +|..+.|++
T Consensus 117 G~LL~~~~~~-~i~~yDw~~~~~i~~i~v~--~vk~V~Ws~ 154 (443)
T PF04053_consen 117 GNLLGVKSSD-FICFYDWETGKLIRRIDVS--AVKYVIWSD 154 (443)
T ss_dssp SSSEEEEETT-EEEEE-TTT--EEEEESS---E-EEEEE-T
T ss_pred CcEEEEECCC-CEEEEEhhHcceeeEEecC--CCcEEEEEC
Confidence 6666665444 8999999999988888643 478888876
No 357
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=93.63 E-value=0.66 Score=25.66 Aligned_cols=74 Identities=14% Similarity=0.162 Sum_probs=45.9
Q ss_pred CCcEEEeeCC-CceeeeeeeccCCCcEEEEEecCCCCEEEEEc------------------CCCeEEEEEcCCcccccc-
Q psy7058 10 DQTARIWNTE-DFSLVRELGTANQRWVWDAAFTLDSKFLLTAS------------------SDGVARLWNIETGEVDKE- 69 (85)
Q Consensus 10 ~~~i~~~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~i~~~~~~~~~~~~~- 69 (85)
.|.|-|||+. +-..+..+.. +.-.-..+.+.||+..++.+. .+..+.+.|..+++.+.+
T Consensus 76 ~G~IgVyd~~~~~~ri~E~~s-~GIGPHel~l~pDG~tLvVANGGI~Thpd~GR~kLNl~tM~psL~~ld~~sG~ll~q~ 154 (305)
T PF07433_consen 76 RGVIGVYDAARGYRRIGEFPS-HGIGPHELLLMPDGETLVVANGGIETHPDSGRAKLNLDTMQPSLVYLDARSGALLEQV 154 (305)
T ss_pred cEEEEEEECcCCcEEEeEecC-CCcChhhEEEcCCCCEEEEEcCCCccCcccCceecChhhcCCceEEEecCCCceeeee
Confidence 4678899998 4455556554 333345677889996665542 122455566677776654
Q ss_pred -c--cccccceeEEEEeC
Q psy7058 70 -Y--SGHQKAITSLAFCD 84 (85)
Q Consensus 70 -~--~~~~~~v~~~~~~~ 84 (85)
+ .-|...|+.+++++
T Consensus 155 ~Lp~~~~~lSiRHLa~~~ 172 (305)
T PF07433_consen 155 ELPPDLHQLSIRHLAVDG 172 (305)
T ss_pred ecCccccccceeeEEecC
Confidence 4 23666788887754
No 358
>smart00564 PQQ beta-propeller repeat. Beta-propeller repeat occurring in enzymes with pyrrolo-quinoline quinone (PQQ) as cofactor, in Ire1p-like Ser/Thr kinases, and in prokaryotic dehydrogenases.
Probab=93.61 E-value=0.14 Score=17.79 Aligned_cols=24 Identities=13% Similarity=0.052 Sum_probs=18.4
Q ss_pred eeEEeeCCCcEEEeeCCCceeeee
Q psy7058 3 LLATTSADQTARIWNTEDFSLVRE 26 (85)
Q Consensus 3 ~l~~~~~~~~i~~~d~~~~~~~~~ 26 (85)
.+..++.++.+..+|..+++..-.
T Consensus 8 ~v~~~~~~g~l~a~d~~~G~~~W~ 31 (33)
T smart00564 8 TVYVGSTDGTLYALDAKTGEILWT 31 (33)
T ss_pred EEEEEcCCCEEEEEEcccCcEEEE
Confidence 577788888999999888776543
No 359
>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.
Probab=93.58 E-value=0.47 Score=28.14 Aligned_cols=60 Identities=12% Similarity=0.153 Sum_probs=39.7
Q ss_pred CcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccc
Q psy7058 11 QTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSG 72 (85)
Q Consensus 11 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 72 (85)
+.+.-+|+.+++..-+...... ..... +.-.+..++.++.++.++.+|.++++.+..++.
T Consensus 441 g~l~AiD~~tGk~~W~~~~~~p-~~~~~-l~t~g~lvf~g~~~G~l~a~D~~TGe~lw~~~~ 500 (527)
T TIGR03075 441 GSLIAWDPITGKIVWEHKEDFP-LWGGV-LATAGDLVFYGTLEGYFKAFDAKTGEELWKFKT 500 (527)
T ss_pred eeEEEEeCCCCceeeEecCCCC-CCCcc-eEECCcEEEEECCCCeEEEEECCCCCEeEEEeC
Confidence 5677888888877665543211 01111 112455677788899999999999998877653
No 360
>PF03088 Str_synth: Strictosidine synthase; InterPro: IPR018119 This entry represents a conserved region found in strictosidine synthase (4.3.3.2 from EC), a key enzyme in alkaloid biosynthesis. It catalyses the Pictet-Spengler stereospecific condensation of tryptamine with secologanin to form strictosidine []. The structure of the native enzyme from the Indian medicinal plant Rauvolfia serpentina (Serpentwood) (Devilpepper) represents the first example of a six-bladed four-stranded beta-propeller fold from the plant kingdom [].; GO: 0016844 strictosidine synthase activity, 0009058 biosynthetic process; PDB: 2FPB_A 2V91_B 2FP8_A 3V1S_B 2FPC_A 2VAQ_A 2FP9_B.
Probab=93.50 E-value=0.33 Score=21.74 Aligned_cols=42 Identities=14% Similarity=0.091 Sum_probs=26.8
Q ss_pred eeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEE
Q psy7058 7 TSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTA 50 (85)
Q Consensus 7 ~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 50 (85)
+..+|.+.-||..+++....+.+ -...+.+++++|+++++.+
T Consensus 33 ~~~~GRll~ydp~t~~~~vl~~~--L~fpNGVals~d~~~vlv~ 74 (89)
T PF03088_consen 33 GRPTGRLLRYDPSTKETTVLLDG--LYFPNGVALSPDESFVLVA 74 (89)
T ss_dssp T---EEEEEEETTTTEEEEEEEE--ESSEEEEEE-TTSSEEEEE
T ss_pred CCCCcCEEEEECCCCeEEEehhC--CCccCeEEEcCCCCEEEEE
Confidence 34567788888887766555544 2246899999999976654
No 361
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=93.10 E-value=0.68 Score=24.25 Aligned_cols=78 Identities=14% Similarity=0.104 Sum_probs=49.5
Q ss_pred EEeeCCCcEEEeeCCCce--e--eeeeec-c-CCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCcccccccccccccee
Q psy7058 5 ATTSADQTARIWNTEDFS--L--VRELGT-A-NQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAIT 78 (85)
Q Consensus 5 ~~~~~~~~i~~~d~~~~~--~--~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~ 78 (85)
++-+..+.|..++..... . ...+.. . .....-.+++..+|.+.++.-..+.|.+++.. ++.+..+......++
T Consensus 150 v~ds~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~G~l~va~~~~~~I~~~~p~-G~~~~~i~~p~~~~t 228 (246)
T PF08450_consen 150 VADSFNGRIWRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVDSDGNLWVADWGGGRIVVFDPD-GKLLREIELPVPRPT 228 (246)
T ss_dssp EEETTTTEEEEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBTTS-EEEEEETTTEEEEEETT-SCEEEEEE-SSSSEE
T ss_pred ecccccceeEEEeccccccceeeeeeEEEcCCCCcCCCcceEcCCCCEEEEEcCCCEEEEECCC-ccEEEEEcCCCCCEE
Confidence 455566677777764221 1 111211 1 11236778999999988887788899999987 777776665555788
Q ss_pred EEEEe
Q psy7058 79 SLAFC 83 (85)
Q Consensus 79 ~~~~~ 83 (85)
+++|.
T Consensus 229 ~~~fg 233 (246)
T PF08450_consen 229 NCAFG 233 (246)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 88884
No 362
>KOG3630|consensus
Probab=92.98 E-value=0.45 Score=30.97 Aligned_cols=30 Identities=10% Similarity=0.095 Sum_probs=25.9
Q ss_pred CCcEEEEEecCCCCEEEEEcCCCeEEEEEc
Q psy7058 32 QRWVWDAAFTLDSKFLLTASSDGVARLWNI 61 (85)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 61 (85)
....++++|+|.|..++.|..+|++.-|..
T Consensus 198 t~~~Tav~WSprGKQl~iG~nnGt~vQy~P 227 (1405)
T KOG3630|consen 198 TNSQTAVLWSPRGKQLFIGRNNGTEVQYEP 227 (1405)
T ss_pred ccceeeEEeccccceeeEecCCCeEEEeec
Confidence 345789999999999999999999887764
No 363
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=92.69 E-value=1 Score=25.33 Aligned_cols=62 Identities=8% Similarity=0.071 Sum_probs=41.7
Q ss_pred ceeEEeeCC-CcEEEeeCCCceeeeeee--ccCCCcEEEEEecCCCCEEEEEc-CCCeEEEEEcCC
Q psy7058 2 GLLATTSAD-QTARIWNTEDFSLVRELG--TANQRWVWDAAFTLDSKFLLTAS-SDGVARLWNIET 63 (85)
Q Consensus 2 ~~l~~~~~~-~~i~~~d~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~ 63 (85)
++|++.... -.+.+|++..+....... ......-..+.|+|++++....+ .+++|.+|....
T Consensus 157 ~~l~v~DLG~Dri~~y~~~dg~L~~~~~~~v~~G~GPRHi~FHpn~k~aY~v~EL~stV~v~~y~~ 222 (346)
T COG2706 157 RYLVVPDLGTDRIFLYDLDDGKLTPADPAEVKPGAGPRHIVFHPNGKYAYLVNELNSTVDVLEYNP 222 (346)
T ss_pred CEEEEeecCCceEEEEEcccCccccccccccCCCCCcceEEEcCCCcEEEEEeccCCEEEEEEEcC
Confidence 456666543 368888888665433221 12334468899999999987655 588999998876
No 364
>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A.
Probab=92.67 E-value=1.1 Score=25.66 Aligned_cols=67 Identities=13% Similarity=0.114 Sum_probs=36.2
Q ss_pred eeEEeeCCC--cEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccc
Q psy7058 3 LLATTSADQ--TARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEY 70 (85)
Q Consensus 3 ~l~~~~~~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 70 (85)
+|..+..++ .+++.|+.+++..+....... ......++++.+.++.......++-.|+.+.+....+
T Consensus 50 llF~s~~dg~~nly~lDL~t~~i~QLTdg~g~-~~~g~~~s~~~~~~~Yv~~~~~l~~vdL~T~e~~~vy 118 (386)
T PF14583_consen 50 LLFASDFDGNRNLYLLDLATGEITQLTDGPGD-NTFGGFLSPDDRALYYVKNGRSLRRVDLDTLEERVVY 118 (386)
T ss_dssp EEEEE-TTSS-EEEEEETTT-EEEE---SS-B--TTT-EE-TTSSEEEEEETTTEEEEEETTT--EEEEE
T ss_pred EEEEeccCCCcceEEEEcccCEEEECccCCCC-CccceEEecCCCeEEEEECCCeEEEEECCcCcEEEEE
Confidence 344555454 577888898887776654221 1224566787787776666678888888877644333
No 365
>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs. It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].
Probab=92.50 E-value=1.6 Score=27.14 Aligned_cols=33 Identities=18% Similarity=0.202 Sum_probs=27.8
Q ss_pred CCcEEEEEecCC---CCEEEEEcCCCeEEEEEcCCc
Q psy7058 32 QRWVWDAAFTLD---SKFLLTASSDGVARLWNIETG 64 (85)
Q Consensus 32 ~~~~~~~~~~~~---~~~~~~~~~~~~i~~~~~~~~ 64 (85)
...|..+.|+|. +..++.-..|+.+|+||+...
T Consensus 146 ~~~i~qv~WhP~s~~~~~l~vLtsdn~lR~y~~~~~ 181 (717)
T PF10168_consen 146 SLEIKQVRWHPWSESDSHLVVLTSDNTLRLYDISDP 181 (717)
T ss_pred CceEEEEEEcCCCCCCCeEEEEecCCEEEEEecCCC
Confidence 346889999996 578999999999999999754
No 366
>PF13570 PQQ_3: PQQ-like domain; PDB: 3HXJ_B 3Q54_A.
Probab=92.24 E-value=0.3 Score=17.98 Aligned_cols=18 Identities=11% Similarity=0.139 Sum_probs=12.8
Q ss_pred ceeEEeeCCCcEEEeeCC
Q psy7058 2 GLLATTSADQTARIWNTE 19 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~ 19 (85)
..+..++.|+.++.+|..
T Consensus 22 g~vyv~~~dg~l~ald~~ 39 (40)
T PF13570_consen 22 GRVYVGTGDGNLYALDAA 39 (40)
T ss_dssp SEEEEE-TTSEEEEEETT
T ss_pred CEEEEEcCCCEEEEEeCC
Confidence 467777788888888765
No 367
>KOG2377|consensus
Probab=92.14 E-value=1.6 Score=26.00 Aligned_cols=54 Identities=15% Similarity=0.228 Sum_probs=38.5
Q ss_pred CCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccc----cccccccceeEEEEeC
Q psy7058 31 NQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDK----EYSGHQKAITSLAFCD 84 (85)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~----~~~~~~~~v~~~~~~~ 84 (85)
..++|.++.|++|.+.++.--.++.|.+++....+... +.+.....|....|+.
T Consensus 65 d~G~I~SIkFSlDnkilAVQR~~~~v~f~nf~~d~~~l~~~~~ck~k~~~IlGF~W~~ 122 (657)
T KOG2377|consen 65 DKGEIKSIKFSLDNKILAVQRTSKTVDFCNFIPDNSQLEYTQECKTKNANILGFCWTS 122 (657)
T ss_pred CCCceeEEEeccCcceEEEEecCceEEEEecCCCchhhHHHHHhccCcceeEEEEEec
Confidence 45689999999999999999999999999985433322 2223344566666653
No 368
>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.
Probab=92.05 E-value=1.6 Score=26.04 Aligned_cols=69 Identities=12% Similarity=0.095 Sum_probs=41.2
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecC---CCCEEEEEc------CCCeEEEEEcCCcccccccc
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTL---DSKFLLTAS------SDGVARLWNIETGEVDKEYS 71 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~------~~~~i~~~~~~~~~~~~~~~ 71 (85)
..++.+..++.+.-.|..+++.+-.........-..+.-+| ++. ++.+. .++.|.-+|..+++.+..+.
T Consensus 121 ~~v~v~t~dg~l~ALDa~TGk~~W~~~~~~~~~~~~~tssP~v~~g~-Vivg~~~~~~~~~G~v~AlD~~TG~~lW~~~ 198 (527)
T TIGR03075 121 GKVFFGTLDARLVALDAKTGKVVWSKKNGDYKAGYTITAAPLVVKGK-VITGISGGEFGVRGYVTAYDAKTGKLVWRRY 198 (527)
T ss_pred CEEEEEcCCCEEEEEECCCCCEEeecccccccccccccCCcEEECCE-EEEeecccccCCCcEEEEEECCCCceeEecc
Confidence 45677788889999999999887655431110000111112 343 33332 26789999999888776544
No 369
>KOG4460|consensus
Probab=91.87 E-value=1.8 Score=26.20 Aligned_cols=34 Identities=24% Similarity=0.257 Sum_probs=26.0
Q ss_pred cEEEEEecCCC---CEEEEEcCCCeEEEEEcCCcccc
Q psy7058 34 WVWDAAFTLDS---KFLLTASSDGVARLWNIETGEVD 67 (85)
Q Consensus 34 ~~~~~~~~~~~---~~~~~~~~~~~i~~~~~~~~~~~ 67 (85)
.+..++|+|+. ..+.....|..+++|+......+
T Consensus 167 tl~Qa~WHP~S~~D~hL~iL~sdnviRiy~lS~~tel 203 (741)
T KOG4460|consen 167 TLKQAAWHPSSILDPHLVLLTSDNVIRIYSLSEPTEL 203 (741)
T ss_pred eeeeccccCCccCCceEEEEecCcEEEEEecCCcchh
Confidence 35567899965 67888889999999998765443
No 370
>PF01011 PQQ: PQQ enzyme repeat family.; InterPro: IPR002372 Pyrrolo-quinoline quinone (PQQ) is a redox coenzyme, which serves as a cofactor for a number of enzymes (quinoproteins) and particularly for some bacterial dehydrogenases [, ]. A number of bacterial quinoproteins belong to this family. Enzymes in this group have repeats of a beta propeller.; PDB: 1H4I_C 1H4J_E 1W6S_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A 1G72_A ....
Probab=91.66 E-value=0.36 Score=17.65 Aligned_cols=27 Identities=7% Similarity=0.015 Sum_probs=22.2
Q ss_pred eeEEeeCCCcEEEeeCCCceeeeeeec
Q psy7058 3 LLATTSADQTARIWNTEDFSLVRELGT 29 (85)
Q Consensus 3 ~l~~~~~~~~i~~~d~~~~~~~~~~~~ 29 (85)
.+..+..++.++-.|..+++..-+...
T Consensus 2 ~v~~~~~~g~l~AlD~~TG~~~W~~~~ 28 (38)
T PF01011_consen 2 RVYVGTPDGYLYALDAKTGKVLWKFQT 28 (38)
T ss_dssp EEEEETTTSEEEEEETTTTSEEEEEES
T ss_pred EEEEeCCCCEEEEEECCCCCEEEeeeC
Confidence 456668999999999999998877765
No 371
>PF14269 Arylsulfotran_2: Arylsulfotransferase (ASST)
Probab=91.49 E-value=1.4 Score=24.27 Aligned_cols=61 Identities=16% Similarity=0.225 Sum_probs=38.4
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCCCc----EEEEEecCCCCEEEEEcCCCeEEEEEc
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQRW----VWDAAFTLDSKFLLTASSDGVARLWNI 61 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~~~ 61 (85)
|++|+++..-..|.+.|..+++.+-.+.+..... -....+-.+.+++-....++.|.+||=
T Consensus 155 G~yLiS~R~~~~i~~I~~~tG~I~W~lgG~~~~df~~~~~~f~~QHdar~~~~~~~~~~IslFDN 219 (299)
T PF14269_consen 155 GDYLISSRNTSTIYKIDPSTGKIIWRLGGKRNSDFTLPATNFSWQHDARFLNESNDDGTISLFDN 219 (299)
T ss_pred ccEEEEecccCEEEEEECCCCcEEEEeCCCCCCcccccCCcEeeccCCEEeccCCCCCEEEEEcC
Confidence 5788888888899999988988888776531111 111333334444444456667777764
No 372
>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2.3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.
Probab=91.47 E-value=1.4 Score=24.00 Aligned_cols=62 Identities=13% Similarity=0.122 Sum_probs=39.5
Q ss_pred EeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCcccccccc
Q psy7058 6 TTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYS 71 (85)
Q Consensus 6 ~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 71 (85)
-.-.++...+||..+.+...++.- ...=+.++ .++..+...+....++++|..+.+....+.
T Consensus 105 LTWk~~~~f~yd~~tl~~~~~~~y--~~EGWGLt--~dg~~Li~SDGS~~L~~~dP~~f~~~~~i~ 166 (264)
T PF05096_consen 105 LTWKEGTGFVYDPNTLKKIGTFPY--PGEGWGLT--SDGKRLIMSDGSSRLYFLDPETFKEVRTIQ 166 (264)
T ss_dssp EESSSSEEEEEETTTTEEEEEEE---SSS--EEE--ECSSCEEEE-SSSEEEEE-TTT-SEEEEEE
T ss_pred EEecCCeEEEEccccceEEEEEec--CCcceEEE--cCCCEEEEECCccceEEECCcccceEEEEE
Confidence 344677888999998888887764 33345665 367777777777899999987665544443
No 373
>KOG2247|consensus
Probab=91.39 E-value=0.069 Score=31.24 Aligned_cols=79 Identities=14% Similarity=0.097 Sum_probs=51.2
Q ss_pred EEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEEEEeC
Q psy7058 5 ATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSLAFCD 84 (85)
Q Consensus 5 ~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 84 (85)
+.+...+.+++||+.+..... +..+....-.-..|++....++.+.-.+.+.+++....+.....-.|...+.++++.+
T Consensus 91 vlAek~~piylwd~n~eytqq-LE~gg~~s~sll~wsKg~~el~ig~~~gn~viynhgtsR~iiv~Gkh~RRgtq~av~l 169 (615)
T KOG2247|consen 91 VLAEKTGPIYLWDVNSEYTQQ-LESGGTSSKSLLAWSKGTPELVIGNNAGNIVIYNHGTSRRIIVMGKHQRRGTQIAVTL 169 (615)
T ss_pred hhhhcCCCeeechhhhhhHHH-HhccCcchHHHHhhccCCccccccccccceEEEeccchhhhhhhcccccceeEEEecc
Confidence 344556778999987543322 2111111122367888888888888889999999877666555555777777777754
No 374
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=91.35 E-value=1.2 Score=25.82 Aligned_cols=53 Identities=17% Similarity=0.041 Sum_probs=33.5
Q ss_pred CcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEE-EcCCCe--EEEEEcCCcc
Q psy7058 11 QTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT-ASSDGV--ARLWNIETGE 65 (85)
Q Consensus 11 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--i~~~~~~~~~ 65 (85)
..++++|+.+++...... .......-.|+|||+.++. ...++. |+++|+...+
T Consensus 218 ~~i~~~~l~~g~~~~i~~--~~g~~~~P~fspDG~~l~f~~~rdg~~~iy~~dl~~~~ 273 (425)
T COG0823 218 PRIYYLDLNTGKRPVILN--FNGNNGAPAFSPDGSKLAFSSSRDGSPDIYLMDLDGKN 273 (425)
T ss_pred ceEEEEeccCCccceeec--cCCccCCccCCCCCCEEEEEECCCCCccEEEEcCCCCc
Confidence 357777887776655544 2333455679999988764 445554 6666776554
No 375
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=90.87 E-value=1.4 Score=23.10 Aligned_cols=79 Identities=14% Similarity=0.085 Sum_probs=41.6
Q ss_pred eeEEeeCCCcEEEeeCCCceeeeeeec---c-CCCcEEEEEecCCCCEEEEEcCC--------CeEEEEEcCCccccccc
Q psy7058 3 LLATTSADQTARIWNTEDFSLVRELGT---A-NQRWVWDAAFTLDSKFLLTASSD--------GVARLWNIETGEVDKEY 70 (85)
Q Consensus 3 ~l~~~~~~~~i~~~d~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~--------~~i~~~~~~~~~~~~~~ 70 (85)
.++.+..++ +.++|..+++....... . .....+.+.+.++|.+.++.... +.+..++.. ++... .
T Consensus 53 ~l~v~~~~~-~~~~d~~~g~~~~~~~~~~~~~~~~~~ND~~vd~~G~ly~t~~~~~~~~~~~~g~v~~~~~~-~~~~~-~ 129 (246)
T PF08450_consen 53 RLYVADSGG-IAVVDPDTGKVTVLADLPDGGVPFNRPNDVAVDPDGNLYVTDSGGGGASGIDPGSVYRIDPD-GKVTV-V 129 (246)
T ss_dssp EEEEEETTC-EEEEETTTTEEEEEEEEETTCSCTEEEEEEEE-TTS-EEEEEECCBCTTCGGSEEEEEEETT-SEEEE-E
T ss_pred EEEEEEcCc-eEEEecCCCcEEEEeeccCCCcccCCCceEEEcCCCCEEEEecCCCccccccccceEEECCC-CeEEE-E
Confidence 344444444 45558887755433332 1 23467899999999977765433 446666655 33222 2
Q ss_pred cccccceeEEEEeC
Q psy7058 71 SGHQKAITSLAFCD 84 (85)
Q Consensus 71 ~~~~~~v~~~~~~~ 84 (85)
...-...+.++|+|
T Consensus 130 ~~~~~~pNGi~~s~ 143 (246)
T PF08450_consen 130 ADGLGFPNGIAFSP 143 (246)
T ss_dssp EEEESSEEEEEEET
T ss_pred ecCcccccceEECC
Confidence 22234445666665
No 376
>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases. The alignment model contains an 8-bladed beta-propeller.
Probab=90.77 E-value=2.2 Score=25.14 Aligned_cols=29 Identities=17% Similarity=0.118 Sum_probs=24.4
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeec
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGT 29 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~ 29 (85)
++.|+.++.|+.++.+|..+++.+-+...
T Consensus 406 g~~v~~g~~dG~l~ald~~tG~~lW~~~~ 434 (488)
T cd00216 406 GNLVFAGAADGYFRAFDATTGKELWKFRT 434 (488)
T ss_pred CCeEEEECCCCeEEEEECCCCceeeEEEC
Confidence 35678888999999999999998877665
No 377
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=90.66 E-value=2 Score=24.36 Aligned_cols=55 Identities=16% Similarity=0.228 Sum_probs=39.3
Q ss_pred CcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEc----------CCCeEEEEEcCCccccc
Q psy7058 11 QTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTAS----------SDGVARLWNIETGEVDK 68 (85)
Q Consensus 11 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~i~~~~~~~~~~~~ 68 (85)
+.++++|..+++....+..+.. -.+.++|+++.+++.. ..-.|.+||..+..+..
T Consensus 17 ~rv~viD~d~~k~lGmi~~g~~---~~~~~spdgk~~y~a~T~~sR~~rG~RtDvv~~~D~~TL~~~~ 81 (342)
T PF06433_consen 17 SRVYVIDADSGKLLGMIDTGFL---GNVALSPDGKTIYVAETFYSRGTRGERTDVVEIWDTQTLSPTG 81 (342)
T ss_dssp EEEEEEETTTTEEEEEEEEESS---EEEEE-TTSSEEEEEEEEEEETTEEEEEEEEEEEETTTTEEEE
T ss_pred ceEEEEECCCCcEEEEeecccC---CceeECCCCCEEEEEEEEEeccccccceeEEEEEecCcCcccc
Confidence 4789999999888888776443 3366789999887643 23479999998775444
No 378
>KOG4499|consensus
Probab=90.39 E-value=1.8 Score=23.48 Aligned_cols=41 Identities=12% Similarity=0.011 Sum_probs=33.8
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecC
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTL 42 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 42 (85)
|++.+++-+.+++...|..+++.+..+.. ....+++.+|..
T Consensus 223 G~L~Va~~ng~~V~~~dp~tGK~L~eikl-Pt~qitsccFgG 263 (310)
T KOG4499|consen 223 GNLYVATFNGGTVQKVDPTTGKILLEIKL-PTPQITSCCFGG 263 (310)
T ss_pred CcEEEEEecCcEEEEECCCCCcEEEEEEc-CCCceEEEEecC
Confidence 56778888889999999999999998887 356689999864
No 379
>KOG4649|consensus
Probab=90.29 E-value=1.9 Score=23.72 Aligned_cols=65 Identities=14% Similarity=0.073 Sum_probs=42.8
Q ss_pred eeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccc
Q psy7058 3 LLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEY 70 (85)
Q Consensus 3 ~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 70 (85)
+++.|+..+.+.--|..+++..-+... ...+.+-+.. -|.+++.|+.++.+++.+.+++.....+
T Consensus 25 ~v~igSHs~~~~avd~~sG~~~We~il--g~RiE~sa~v-vgdfVV~GCy~g~lYfl~~~tGs~~w~f 89 (354)
T KOG4649|consen 25 LVVIGSHSGIVIAVDPQSGNLIWEAIL--GVRIECSAIV-VGDFVVLGCYSGGLYFLCVKTGSQIWNF 89 (354)
T ss_pred EEEEecCCceEEEecCCCCcEEeehhh--CceeeeeeEE-ECCEEEEEEccCcEEEEEecchhheeee
Confidence 466777777777778777766544322 1223222211 4788999999999999999988655444
No 380
>PF01436 NHL: NHL repeat; InterPro: IPR001258 The NHL repeat, named after NCL-1, HT2A and Lin-41, is found largely in a large number of eukaryotic and prokaryotic proteins. For example, the repeat is found in a variety of enzymes of the copper type II, ascorbate-dependent monooxygenase family which catalyse the C terminus alpha-amidation of biological peptides []. In many it occurs in tandem arrays, for example in the ringfinger beta-box, coiled-coil (RBCC) eukaryotic growth regulators []. The 'Brain Tumor' protein (Brat) is one such growth regulator that contains a 6-bladed NHL-repeat beta-propeller [, ]. The NHL repeats are also found in serine/threonine protein kinase (STPK) in diverse range of pathogenic bacteria. These STPK are transmembrane receptors with a intracellular N-terminal kinase domain and extracellular C-terminal sensor domain. In the STPK, PknD, from Mycobacterium tuberculosis, the sensor domain forms a rigid, six-bladed b-propeller composed of NHL repeats with a flexible tether to the transmembrane domain.; GO: 0005515 protein binding; PDB: 3FVZ_A 3FW0_A 1RWL_A 1RWI_A 1Q7F_A.
Probab=90.27 E-value=0.43 Score=16.21 Aligned_cols=24 Identities=13% Similarity=0.241 Sum_probs=13.6
Q ss_pred EEEEecCCCCEEEEEcCCCeEEEE
Q psy7058 36 WDAAFTLDSKFLLTASSDGVARLW 59 (85)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~i~~~ 59 (85)
..+++.++|..+++=..++.|.+|
T Consensus 5 ~gvav~~~g~i~VaD~~n~rV~vf 28 (28)
T PF01436_consen 5 HGVAVDSDGNIYVADSGNHRVQVF 28 (28)
T ss_dssp EEEEEETTSEEEEEECCCTEEEEE
T ss_pred cEEEEeCCCCEEEEECCCCEEEEC
Confidence 455666666666555555555543
No 381
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=90.26 E-value=2.4 Score=24.72 Aligned_cols=57 Identities=14% Similarity=0.226 Sum_probs=33.1
Q ss_pred EEeeCCCc--EEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEE-cCCCeEEE--EEcCC
Q psy7058 5 ATTSADQT--ARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTA-SSDGVARL--WNIET 63 (85)
Q Consensus 5 ~~~~~~~~--i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~--~~~~~ 63 (85)
.+..+|+. |++.|+.+.+... +.. ..+.-..-.|+|+|+.++.. +..|.-.| ++...
T Consensus 254 f~~~rdg~~~iy~~dl~~~~~~~-Lt~-~~gi~~~Ps~spdG~~ivf~Sdr~G~p~I~~~~~~g 315 (425)
T COG0823 254 FSSSRDGSPDIYLMDLDGKNLPR-LTN-GFGINTSPSWSPDGSKIVFTSDRGGRPQIYLYDLEG 315 (425)
T ss_pred EEECCCCCccEEEEcCCCCccee-ccc-CCccccCccCCCCCCEEEEEeCCCCCcceEEECCCC
Confidence 45555554 7777888776444 332 22223366799999987654 44555444 44443
No 382
>KOG2114|consensus
Probab=89.88 E-value=3.7 Score=26.29 Aligned_cols=82 Identities=11% Similarity=0.115 Sum_probs=50.2
Q ss_pred eeEEeeCCCcEEEeeCC---CceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccc-ccccccccccee
Q psy7058 3 LLATTSADQTARIWNTE---DFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEV-DKEYSGHQKAIT 78 (85)
Q Consensus 3 ~l~~~~~~~~i~~~d~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~v~ 78 (85)
.++.|-.+|.|..+.-. .......+......+|+.+.+..++..++.+.....|..|.+....+ ...+..++..++
T Consensus 139 ~Iv~Gf~nG~V~~~~GDi~RDrgsr~~~~~~~~~pITgL~~~~d~~s~lFv~Tt~~V~~y~l~gr~p~~~~ld~~G~~ln 218 (933)
T KOG2114|consen 139 TIVCGFTNGLVICYKGDILRDRGSRQDYSHRGKEPITGLALRSDGKSVLFVATTEQVMLYSLSGRTPSLKVLDNNGISLN 218 (933)
T ss_pred EEEEEecCcEEEEEcCcchhccccceeeeccCCCCceeeEEecCCceeEEEEecceeEEEEecCCCcceeeeccCCccce
Confidence 46777788888776532 11111222222456899999988887744444556788888873222 334666677777
Q ss_pred EEEEeC
Q psy7058 79 SLAFCD 84 (85)
Q Consensus 79 ~~~~~~ 84 (85)
|.++++
T Consensus 219 Css~~~ 224 (933)
T KOG2114|consen 219 CSSFSD 224 (933)
T ss_pred eeecCC
Confidence 777664
No 383
>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit. CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....
Probab=89.65 E-value=2.2 Score=23.46 Aligned_cols=62 Identities=15% Similarity=0.239 Sum_probs=38.3
Q ss_pred CceeEEeeCCCcEEEeeCCC-ceeeeee-eccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcC
Q psy7058 1 MGLLATTSADQTARIWNTED-FSLVREL-GTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIE 62 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 62 (85)
+++++.|.....+.++.... ......+ .......+.++.+-+++..++.++.++.+.++...
T Consensus 139 ~~~I~vgD~~~sv~~~~~~~~~~~l~~va~d~~~~~v~~~~~l~d~~~~i~~D~~gnl~~l~~~ 202 (321)
T PF03178_consen 139 KNYILVGDAMKSVSLLRYDEENNKLILVARDYQPRWVTAAEFLVDEDTIIVGDKDGNLFVLRYN 202 (321)
T ss_dssp TTEEEEEESSSSEEEEEEETTTE-EEEEEEESS-BEEEEEEEE-SSSEEEEEETTSEEEEEEE-
T ss_pred ccEEEEEEcccCEEEEEEEccCCEEEEEEecCCCccEEEEEEecCCcEEEEEcCCCeEEEEEEC
Confidence 35677887777777663332 2212222 22234557788777666788899999999999876
No 384
>KOG1920|consensus
Probab=89.64 E-value=4.5 Score=26.95 Aligned_cols=57 Identities=11% Similarity=0.081 Sum_probs=38.6
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEE
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWN 60 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 60 (85)
+.++.+..+|.|.+-|..+.... +.+.-...|.+++|+||+..++..+...++.+-+
T Consensus 81 ~~i~v~~~~G~iilvd~et~~~e--ivg~vd~GI~aaswS~Dee~l~liT~~~tll~mT 137 (1265)
T KOG1920|consen 81 NSICVITALGDIILVDPETLELE--IVGNVDNGISAASWSPDEELLALITGRQTLLFMT 137 (1265)
T ss_pred ceEEEEecCCcEEEEccccccee--eeeeccCceEEEeecCCCcEEEEEeCCcEEEEEe
Confidence 34566777788887776554322 2222345699999999999998887777766543
No 385
>PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal
Probab=88.85 E-value=1.7 Score=21.16 Aligned_cols=76 Identities=12% Similarity=0.046 Sum_probs=43.7
Q ss_pred eeEEeeCCCcEEEeeCCCce--------eeeeeeccCCCcEEEEEecC-----CCCEEEEEcCCCeEEEEEcCCcccccc
Q psy7058 3 LLATTSADQTARIWNTEDFS--------LVRELGTANQRWVWDAAFTL-----DSKFLLTASSDGVARLWNIETGEVDKE 69 (85)
Q Consensus 3 ~l~~~~~~~~i~~~d~~~~~--------~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~i~~~~~~~~~~~~~ 69 (85)
-|+.+...++|.+++..... .+..+. -+..+.+++-.+ +...++.| ....+..||+.+..-+..
T Consensus 12 cL~~aT~~gKV~IH~ph~~~~~~~~~~~~i~~LN--in~~italaaG~l~~~~~~D~LliG-t~t~llaYDV~~N~d~Fy 88 (136)
T PF14781_consen 12 CLACATTGGKVFIHNPHERGQRTGRQDSDISFLN--INQEITALAAGRLKPDDGRDCLLIG-TQTSLLAYDVENNSDLFY 88 (136)
T ss_pred eEEEEecCCEEEEECCCccccccccccCceeEEE--CCCceEEEEEEecCCCCCcCEEEEe-ccceEEEEEcccCchhhh
Confidence 36777788999999865322 222333 234466665433 23445555 555888899976654433
Q ss_pred ccccccceeEEEE
Q psy7058 70 YSGHQKAITSLAF 82 (85)
Q Consensus 70 ~~~~~~~v~~~~~ 82 (85)
.. -.+.++++.+
T Consensus 89 ke-~~DGvn~i~~ 100 (136)
T PF14781_consen 89 KE-VPDGVNAIVI 100 (136)
T ss_pred hh-CccceeEEEE
Confidence 22 3456666654
No 386
>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....
Probab=88.55 E-value=3.1 Score=23.72 Aligned_cols=33 Identities=24% Similarity=0.262 Sum_probs=24.3
Q ss_pred EEEEEecCCCCEEEEE-cCC----CeEEEEEcCCcccc
Q psy7058 35 VWDAAFTLDSKFLLTA-SSD----GVARLWNIETGEVD 67 (85)
Q Consensus 35 ~~~~~~~~~~~~~~~~-~~~----~~i~~~~~~~~~~~ 67 (85)
+....++|++++++.+ +.. ..++++|+.+++.+
T Consensus 126 ~~~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~~l 163 (414)
T PF02897_consen 126 LGGFSVSPDGKRLAYSLSDGGSEWYTLRVFDLETGKFL 163 (414)
T ss_dssp EEEEEETTTSSEEEEEEEETTSSEEEEEEEETTTTEEE
T ss_pred eeeeeECCCCCEEEEEecCCCCceEEEEEEECCCCcCc
Confidence 3467889999988754 333 36999999988654
No 387
>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]
Probab=88.49 E-value=2.9 Score=23.28 Aligned_cols=30 Identities=20% Similarity=0.247 Sum_probs=22.1
Q ss_pred CcEEEEEecCCCCEEEEEcC-CCeEEEEEcC
Q psy7058 33 RWVWDAAFTLDSKFLLTASS-DGVARLWNIE 62 (85)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~ 62 (85)
..-+.++|+||++.+..... .+.|.-|++.
T Consensus 163 ~~~NGla~SpDg~tly~aDT~~~~i~r~~~d 193 (307)
T COG3386 163 TIPNGLAFSPDGKTLYVADTPANRIHRYDLD 193 (307)
T ss_pred EecCceEECCCCCEEEEEeCCCCeEEEEecC
Confidence 34578999999987776654 4677777764
No 388
>KOG1916|consensus
Probab=88.48 E-value=1 Score=28.90 Aligned_cols=24 Identities=25% Similarity=0.351 Sum_probs=21.5
Q ss_pred EecCCCCEEEEEcCCCeEEEEEcC
Q psy7058 39 AFTLDSKFLLTASSDGVARLWNIE 62 (85)
Q Consensus 39 ~~~~~~~~~~~~~~~~~i~~~~~~ 62 (85)
.++|||..+++.+.||.+++|.+.
T Consensus 242 ~lSpDGtv~a~a~~dG~v~f~Qiy 265 (1283)
T KOG1916|consen 242 SLSPDGTVFAWAISDGSVGFYQIY 265 (1283)
T ss_pred eeCCCCcEEEEeecCCccceeeee
Confidence 479999999999999999999874
No 389
>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex. Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm
Probab=87.93 E-value=3.7 Score=23.79 Aligned_cols=48 Identities=19% Similarity=0.309 Sum_probs=33.7
Q ss_pred cEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcC
Q psy7058 12 TARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIE 62 (85)
Q Consensus 12 ~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 62 (85)
.|.+|+.. |+.+.++.-.. +.+.++.|..+. .++....+|.+++||+.
T Consensus 62 ~I~iys~s-G~ll~~i~w~~-~~iv~~~wt~~e-~LvvV~~dG~v~vy~~~ 109 (410)
T PF04841_consen 62 SIQIYSSS-GKLLSSIPWDS-GRIVGMGWTDDE-ELVVVQSDGTVRVYDLF 109 (410)
T ss_pred EEEEECCC-CCEeEEEEECC-CCEEEEEECCCC-eEEEEEcCCEEEEEeCC
Confidence 37777755 55555554423 679999998754 45566799999999985
No 390
>KOG2395|consensus
Probab=87.88 E-value=4.4 Score=24.65 Aligned_cols=77 Identities=13% Similarity=0.075 Sum_probs=42.1
Q ss_pred EEeeCCCcEEEeeCCCc-e-eeeeeec-cC--CCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeE
Q psy7058 5 ATTSADQTARIWNTEDF-S-LVRELGT-AN--QRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITS 79 (85)
Q Consensus 5 ~~~~~~~~i~~~d~~~~-~-~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~ 79 (85)
+.|-.+..+.-||.+-. + .+.-... .+ ....+|.+-..+| +++.|+.+|-|++||--.-+.--.+++-.++|..
T Consensus 398 lvGLs~n~vfriDpRv~~~~kl~~~q~kqy~~k~nFsc~aTT~sG-~IvvgS~~GdIRLYdri~~~AKTAlPgLG~~I~h 476 (644)
T KOG2395|consen 398 LVGLSDNSVFRIDPRVQGKNKLAVVQSKQYSTKNNFSCFATTESG-YIVVGSLKGDIRLYDRIGRRAKTALPGLGDAIKH 476 (644)
T ss_pred EEeecCCceEEecccccCcceeeeeeccccccccccceeeecCCc-eEEEeecCCcEEeehhhhhhhhhcccccCCceee
Confidence 34556677777887621 1 1111111 01 1223444433344 6788899999999997322322346666777766
Q ss_pred EEE
Q psy7058 80 LAF 82 (85)
Q Consensus 80 ~~~ 82 (85)
+..
T Consensus 477 Vdv 479 (644)
T KOG2395|consen 477 VDV 479 (644)
T ss_pred EEe
Confidence 543
No 391
>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals. The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.
Probab=87.74 E-value=3.8 Score=23.71 Aligned_cols=64 Identities=11% Similarity=0.089 Sum_probs=36.1
Q ss_pred eeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEec-----CCCCEEEEEcCCCeEEEEEcCCcccccccc
Q psy7058 7 TSADQTARIWNTEDFSLVRELGTANQRWVWDAAFT-----LDSKFLLTASSDGVARLWNIETGEVDKEYS 71 (85)
Q Consensus 7 ~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 71 (85)
...+..++++...+.+...+... .......+.+. ..+..++....+|.+++|.++..+.+..+.
T Consensus 231 vvSe~~irv~~~~~~k~~~K~~~-~~~~~~~~~vv~~~~~~~~~~Lv~l~~~G~i~i~SLP~Lkei~~~~ 299 (395)
T PF08596_consen 231 VVSESDIRVFKPPKSKGAHKSFD-DPFLCSSASVVPTISRNGGYCLVCLFNNGSIRIYSLPSLKEIKSVS 299 (395)
T ss_dssp EE-SSEEEEE-TT---EEEEE-S-S-EEEEEEEEEEEE-EEEEEEEEEEETTSEEEEEETTT--EEEEEE
T ss_pred EEcccceEEEeCCCCcccceeec-cccccceEEEEeecccCCceEEEEEECCCcEEEEECCCchHhhccc
Confidence 33467799999887776665542 32223333442 246667788899999999998877655443
No 392
>PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A ....
Probab=87.59 E-value=0.9 Score=16.42 Aligned_cols=28 Identities=18% Similarity=0.256 Sum_probs=17.5
Q ss_pred CCcEEEEEecCCCCEEEEEc-CC--CeEEEE
Q psy7058 32 QRWVWDAAFTLDSKFLLTAS-SD--GVARLW 59 (85)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~-~~--~~i~~~ 59 (85)
........|+|||+.++..+ .+ +...||
T Consensus 8 ~~~~~~p~~SpDGk~i~f~s~~~~~g~~diy 38 (39)
T PF07676_consen 8 PGDDGSPAWSPDGKYIYFTSNRNDRGSFDIY 38 (39)
T ss_dssp SSSEEEEEE-TTSSEEEEEEECT--SSEEEE
T ss_pred CccccCEEEecCCCEEEEEecCCCCCCcCEE
Confidence 34567889999998877544 34 444444
No 393
>PRK04043 tolB translocation protein TolB; Provisional
Probab=86.85 E-value=4.4 Score=23.56 Aligned_cols=70 Identities=10% Similarity=-0.022 Sum_probs=39.4
Q ss_pred CcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCE-EEEEcC---CCeEEEEEcCCccccccccccccceeEEEEeC
Q psy7058 11 QTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKF-LLTASS---DGVARLWNIETGEVDKEYSGHQKAITSLAFCD 84 (85)
Q Consensus 11 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---~~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 84 (85)
..|.+-|..... ...+.. .. ......|+|+|+. ++..+. +..|.++|+.+++...-.. .........|+|
T Consensus 169 ~~l~~~d~dg~~-~~~~~~-~~-~~~~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg~~~~lt~-~~g~~~~~~~SP 242 (419)
T PRK04043 169 SNIVLADYTLTY-QKVIVK-GG-LNIFPKWANKEQTAFYYTSYGERKPTLYKYNLYTGKKEKIAS-SQGMLVVSDVSK 242 (419)
T ss_pred ceEEEECCCCCc-eeEEcc-CC-CeEeEEECCCCCcEEEEEEccCCCCEEEEEECCCCcEEEEec-CCCcEEeeEECC
Confidence 356665554333 232322 22 5778999999984 553322 3578888987775433222 333444556666
No 394
>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A.
Probab=86.46 E-value=4 Score=22.73 Aligned_cols=57 Identities=14% Similarity=0.251 Sum_probs=30.0
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEE
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWN 60 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 60 (85)
.+++++.......-||--. .............+..+.|++++...... ..+.+++=+
T Consensus 157 ~~vavs~~G~~~~s~~~G~-~~w~~~~r~~~~riq~~gf~~~~~lw~~~-~Gg~~~~s~ 213 (302)
T PF14870_consen 157 RYVAVSSRGNFYSSWDPGQ-TTWQPHNRNSSRRIQSMGFSPDGNLWMLA-RGGQIQFSD 213 (302)
T ss_dssp -EEEEETTSSEEEEE-TT--SS-EEEE--SSS-EEEEEE-TTS-EEEEE-TTTEEEEEE
T ss_pred cEEEEECcccEEEEecCCC-ccceEEccCccceehhceecCCCCEEEEe-CCcEEEEcc
Confidence 4455555544455666331 12222222245679999999998776654 778888776
No 395
>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.
Probab=86.33 E-value=6.5 Score=24.99 Aligned_cols=70 Identities=11% Similarity=0.198 Sum_probs=42.9
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccCC-----------CcEEEEEecC--CCCEEEEEcC----------CCeEEE
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTANQ-----------RWVWDAAFTL--DSKFLLTASS----------DGVARL 58 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~-----------~~~~~~~~~~--~~~~~~~~~~----------~~~i~~ 58 (85)
++++.+..|+.+.-.|..+++..-.+..... .....+.-.| .+..++.++. ++.|+-
T Consensus 261 ~rV~~~T~Dg~LiALDA~TGk~~W~fg~~G~vdl~~~~g~~~~g~~~~ts~P~V~~g~VIvG~~v~d~~~~~~~~G~I~A 340 (764)
T TIGR03074 261 RRIILPTSDARLIALDADTGKLCEDFGNNGTVDLTAGMGTTPPGYYYPTSPPLVAGTTVVIGGRVADNYSTDEPSGVIRA 340 (764)
T ss_pred CEEEEecCCCeEEEEECCCCCEEEEecCCCceeeecccCcCCCcccccccCCEEECCEEEEEecccccccccCCCcEEEE
Confidence 3677888899999999999988865432100 0000111122 1334444432 578999
Q ss_pred EEcCCcccccccc
Q psy7058 59 WNIETGEVDKEYS 71 (85)
Q Consensus 59 ~~~~~~~~~~~~~ 71 (85)
+|.++++.+..+.
T Consensus 341 ~Da~TGkl~W~~~ 353 (764)
T TIGR03074 341 FDVNTGALVWAWD 353 (764)
T ss_pred EECCCCcEeeEEe
Confidence 9999998776654
No 396
>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []. Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.
Probab=84.66 E-value=4.6 Score=21.81 Aligned_cols=57 Identities=12% Similarity=0.054 Sum_probs=31.5
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccC--------CCcEEEEEecCCCCEEEEEcCCCeEEEE
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTAN--------QRWVWDAAFTLDSKFLLTASSDGVARLW 59 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 59 (85)
|.+++.+..+..+..+| ..+++...+.-.. -.....+++.++|.+.++. +.+..+.|
T Consensus 183 ~~lliLS~es~~l~~~d-~~G~~~~~~~L~~g~~gl~~~~~QpEGIa~d~~G~LYIvs-EpNlfy~f 247 (248)
T PF06977_consen 183 GHLLILSDESRLLLELD-RQGRVVSSLSLDRGFHGLSKDIPQPEGIAFDPDGNLYIVS-EPNLFYRF 247 (248)
T ss_dssp TEEEEEETTTTEEEEE--TT--EEEEEE-STTGGG-SS---SEEEEEE-TT--EEEEE-TTTEEEEE
T ss_pred CeEEEEECCCCeEEEEC-CCCCEEEEEEeCCcccCcccccCCccEEEECCCCCEEEEc-CCceEEEe
Confidence 35677888888888889 5566655443311 1346789999988665554 55555554
No 397
>PRK13616 lipoprotein LpqB; Provisional
Probab=84.23 E-value=7.5 Score=23.90 Aligned_cols=26 Identities=12% Similarity=-0.022 Sum_probs=19.9
Q ss_pred CCcEEEEEecCCCCEEEEEcCCCeEEE
Q psy7058 32 QRWVWDAAFTLDSKFLLTASSDGVARL 58 (85)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~i~~ 58 (85)
...|..+.|+|||..++... ++.|.+
T Consensus 447 ~g~Issl~wSpDG~RiA~i~-~g~v~V 472 (591)
T PRK13616 447 PGPISELQLSRDGVRAAMII-GGKVYL 472 (591)
T ss_pred CCCcCeEEECCCCCEEEEEE-CCEEEE
Confidence 34599999999999877654 466666
No 398
>PF12768 Rax2: Cortical protein marker for cell polarity
Probab=83.93 E-value=5.4 Score=22.02 Aligned_cols=56 Identities=9% Similarity=0.153 Sum_probs=36.3
Q ss_pred CCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEc------CCCeEEEEEcCCcc
Q psy7058 9 ADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTAS------SDGVARLWNIETGE 65 (85)
Q Consensus 9 ~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~i~~~~~~~~~ 65 (85)
....+++||..+.+-. .+...-.+.|..+.|..+...++.|. ....+..||..+..
T Consensus 14 ~C~~lC~yd~~~~qW~-~~g~~i~G~V~~l~~~~~~~Llv~G~ft~~~~~~~~la~yd~~~~~ 75 (281)
T PF12768_consen 14 PCPGLCLYDTDNSQWS-SPGNGISGTVTDLQWASNNQLLVGGNFTLNGTNSSNLATYDFKNQT 75 (281)
T ss_pred CCCEEEEEECCCCEee-cCCCCceEEEEEEEEecCCEEEEEEeeEECCCCceeEEEEecCCCe
Confidence 3456999997754433 33222556799999986666666553 34568888886553
No 399
>PRK13616 lipoprotein LpqB; Provisional
Probab=83.52 E-value=8.1 Score=23.76 Aligned_cols=48 Identities=13% Similarity=0.160 Sum_probs=28.0
Q ss_pred EEEEEecCCCCEEEEEcCC------------CeEEEEEcCCccccccccccccceeEEEEeCC
Q psy7058 35 VWDAAFTLDSKFLLTASSD------------GVARLWNIETGEVDKEYSGHQKAITSLAFCDF 85 (85)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~------------~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 85 (85)
...-.|+|+|..+.+.... +.+.+.++..+.... .....|..++|||.
T Consensus 399 ~t~PsWspDG~~lw~v~dg~~~~~v~~~~~~gql~~~~vd~ge~~~---~~~g~Issl~wSpD 458 (591)
T PRK13616 399 LTRPSWSLDADAVWVVVDGNTVVRVIRDPATGQLARTPVDASAVAS---RVPGPISELQLSRD 458 (591)
T ss_pred CCCceECCCCCceEEEecCcceEEEeccCCCceEEEEeccCchhhh---ccCCCcCeEEECCC
Confidence 6778899998876665422 233333443333222 23457889999874
No 400
>PF15390 DUF4613: Domain of unknown function (DUF4613)
Probab=82.77 E-value=9.1 Score=23.75 Aligned_cols=34 Identities=21% Similarity=0.292 Sum_probs=24.9
Q ss_pred cCCCcEEEEEecCCCCEEEEE-cCCCeEEEEEcCC
Q psy7058 30 ANQRWVWDAAFTLDSKFLLTA-SSDGVARLWNIET 63 (85)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~ 63 (85)
...+.|.|.+|.+||+.++.+ +..=.-++||-.+
T Consensus 153 ~~~G~IhCACWT~DG~RLVVAvGSsLHSyiWd~~q 187 (671)
T PF15390_consen 153 KTSGLIHCACWTKDGQRLVVAVGSSLHSYIWDSAQ 187 (671)
T ss_pred cCCceEEEEEecCcCCEEEEEeCCeEEEEEecCch
Confidence 356779999999999876544 4455788898643
No 401
>COG3391 Uncharacterized conserved protein [Function unknown]
Probab=82.42 E-value=7.2 Score=22.34 Aligned_cols=78 Identities=15% Similarity=0.153 Sum_probs=48.8
Q ss_pred eEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcC---CCeEEEEEcCCccccccccccccceeEE
Q psy7058 4 LATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASS---DGVARLWNIETGEVDKEYSGHQKAITSL 80 (85)
Q Consensus 4 l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~i~~~~~~~~~~~~~~~~~~~~v~~~ 80 (85)
++....+..+.+.|..+........... ....+.+++++..+..... ++.+.+.|..+.+..........+ ..+
T Consensus 89 yv~~~~~~~v~vid~~~~~~~~~~~vG~--~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~~~~~~~~vG~~P-~~~ 165 (381)
T COG3391 89 YVTTGDSNTVSVIDTATNTVLGSIPVGL--GPVGLAVDPDGKYVYVANAGNGNNTVSVIDAATNKVTATIPVGNTP-TGV 165 (381)
T ss_pred EEecCCCCeEEEEcCcccceeeEeeecc--CCceEEECCCCCEEEEEecccCCceEEEEeCCCCeEEEEEecCCCc-ceE
Confidence 3444456778888876665555554322 4567889999877766554 678888888877766654432223 444
Q ss_pred EEeC
Q psy7058 81 AFCD 84 (85)
Q Consensus 81 ~~~~ 84 (85)
+++|
T Consensus 166 a~~p 169 (381)
T COG3391 166 AVDP 169 (381)
T ss_pred EECC
Confidence 4443
No 402
>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.
Probab=81.56 E-value=11 Score=24.03 Aligned_cols=46 Identities=13% Similarity=0.064 Sum_probs=30.2
Q ss_pred CceeEE-eeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEec-CCCCE
Q psy7058 1 MGLLAT-TSADQTARIWNTEDFSLVRELGTANQRWVWDAAFT-LDSKF 46 (85)
Q Consensus 1 g~~l~~-~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 46 (85)
|++++. +..|+.++-+|.++++.+-+........-.-+.+. .+|+.
T Consensus 691 gglvF~~gt~d~~l~A~D~~tGk~lW~~~l~~~~~a~P~tY~~~~GkQ 738 (764)
T TIGR03074 691 GGLVFIGATQDNYLRAYDLSTGKELWKARLPAGGQATPMTYMGKDGKQ 738 (764)
T ss_pred CCEEEEEeCCCCEEEEEECCCCceeeEeeCCCCcccCCEEEEecCCEE
Confidence 356665 67899999999999998877665332222334444 46654
No 403
>KOG2114|consensus
Probab=81.21 E-value=12 Score=24.23 Aligned_cols=69 Identities=7% Similarity=0.074 Sum_probs=41.4
Q ss_pred CcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCcccccccc-ccccceeEE
Q psy7058 11 QTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYS-GHQKAITSL 80 (85)
Q Consensus 11 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~v~~~ 80 (85)
..|.+|.+....+.......++..++|..+++....+..+ .+..+.+|+....++-.++. ++......+
T Consensus 193 ~~V~~y~l~gr~p~~~~ld~~G~~lnCss~~~~t~qfIca-~~e~l~fY~sd~~~~cfaf~~g~kk~~~~~ 262 (933)
T KOG2114|consen 193 EQVMLYSLSGRTPSLKVLDNNGISLNCSSFSDGTYQFICA-GSEFLYFYDSDGRGPCFAFEVGEKKEMLVF 262 (933)
T ss_pred ceeEEEEecCCCcceeeeccCCccceeeecCCCCccEEEe-cCceEEEEcCCCcceeeeecCCCeEEEEEE
Confidence 4567777663333333233367778888887654434433 45578899988766666676 555444433
No 404
>PF14779 BBS1: Ciliary BBSome complex subunit 1
Probab=80.73 E-value=7.3 Score=21.31 Aligned_cols=55 Identities=15% Similarity=0.234 Sum_probs=34.4
Q ss_pred eeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEec--CC-CCE-EEEEcCCCeEEEE
Q psy7058 3 LLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFT--LD-SKF-LLTASSDGVARLW 59 (85)
Q Consensus 3 ~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~-~~~~~~~~~i~~~ 59 (85)
-|+.|.+++.|++.|........+..... -++ .+... .| ..+ ++.++.||.|++.
T Consensus 197 cLViGTE~~~i~iLd~~af~il~~~~lps-vPv-~i~~~G~~devdyRI~Va~Rdg~iy~i 255 (257)
T PF14779_consen 197 CLVIGTESGEIYILDPQAFTILKQVQLPS-VPV-FISVSGQYDEVDYRIVVACRDGKIYTI 255 (257)
T ss_pred eEEEEecCCeEEEECchhheeEEEEecCC-Cce-EEEEEeeeeccceEEEEEeCCCEEEEE
Confidence 47889999999999988777777666522 222 22221 12 332 4566788887653
No 405
>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []. Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.
Probab=80.58 E-value=7.2 Score=21.12 Aligned_cols=59 Identities=12% Similarity=0.138 Sum_probs=40.1
Q ss_pred eeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcC
Q psy7058 3 LLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIE 62 (85)
Q Consensus 3 ~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 62 (85)
++++....+.|...+. +++..+++..........+.+..++.++++--.++.+.++++.
T Consensus 36 LfaV~d~~~~i~els~-~G~vlr~i~l~g~~D~EgI~y~g~~~~vl~~Er~~~L~~~~~~ 94 (248)
T PF06977_consen 36 LFAVQDEPGEIYELSL-DGKVLRRIPLDGFGDYEGITYLGNGRYVLSEERDQRLYIFTID 94 (248)
T ss_dssp EEEEETTTTEEEEEET-T--EEEEEE-SS-SSEEEEEE-STTEEEEEETTTTEEEEEEE-
T ss_pred EEEEECCCCEEEEEcC-CCCEEEEEeCCCCCCceeEEEECCCEEEEEEcCCCcEEEEEEe
Confidence 4567777788888886 4777777765334557888888788777777678899999884
No 406
>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A.
Probab=79.95 E-value=8.4 Score=21.55 Aligned_cols=54 Identities=13% Similarity=0.224 Sum_probs=26.5
Q ss_pred CCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEEEEeC
Q psy7058 31 NQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSLAFCD 84 (85)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 84 (85)
....+..+..+++|.+++.+.......-|+--...-...-......|..|.|+|
T Consensus 143 ~~gs~~~~~r~~dG~~vavs~~G~~~~s~~~G~~~w~~~~r~~~~riq~~gf~~ 196 (302)
T PF14870_consen 143 TSGSINDITRSSDGRYVAVSSRGNFYSSWDPGQTTWQPHNRNSSRRIQSMGFSP 196 (302)
T ss_dssp ----EEEEEE-TTS-EEEEETTSSEEEEE-TT-SS-EEEE--SSS-EEEEEE-T
T ss_pred CcceeEeEEECCCCcEEEEECcccEEEEecCCCccceEEccCccceehhceecC
Confidence 345577888889999888886666666666532211111222346677777765
No 407
>KOG2467|consensus
Probab=79.26 E-value=2.4 Score=24.57 Aligned_cols=20 Identities=15% Similarity=-0.001 Sum_probs=17.3
Q ss_pred ceeEEeeCCCcEEEeeCCCc
Q psy7058 2 GLLATTSADQTARIWNTEDF 21 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~ 21 (85)
-.|++++.|..+.+||++..
T Consensus 342 y~lvtgGTDnHlvLvDLr~~ 361 (477)
T KOG2467|consen 342 YKLVTGGTDNHLVLVDLRPK 361 (477)
T ss_pred ceEecCCccceEEEEecccc
Confidence 46899999999999999853
No 408
>PF12341 DUF3639: Protein of unknown function (DUF3639) ; InterPro: IPR022100 This domain family is found in eukaryotes, and is approximately 30 amino acids in length. The family is found in association with PF00400 from PFAM. There are two completely conserved residues (E and R) that may be functionally important.
Probab=79.17 E-value=2.3 Score=14.60 Aligned_cols=24 Identities=21% Similarity=0.346 Sum_probs=17.0
Q ss_pred EEEEEecCCCCEEEEEcCCCeEEEEE
Q psy7058 35 VWDAAFTLDSKFLLTASSDGVARLWN 60 (85)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~i~~~~ 60 (85)
+.+++. ...+++.+.+.+.+|+|.
T Consensus 4 i~aia~--g~~~vavaTS~~~lRifs 27 (27)
T PF12341_consen 4 IEAIAA--GDSWVAVATSAGYLRIFS 27 (27)
T ss_pred EEEEEc--cCCEEEEEeCCCeEEecC
Confidence 556665 355777888888898873
No 409
>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases. The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....
Probab=77.09 E-value=11 Score=21.22 Aligned_cols=55 Identities=16% Similarity=0.082 Sum_probs=30.1
Q ss_pred eeEEeeCCCcEEEeeCCCceeee-e--eeccCCCcEEEEEecCCCCEEEEEcCCCeEE
Q psy7058 3 LLATTSADQTARIWNTEDFSLVR-E--LGTANQRWVWDAAFTLDSKFLLTASSDGVAR 57 (85)
Q Consensus 3 ~l~~~~~~~~i~~~d~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 57 (85)
+++..-..+.|....+.....+. . +.......+..+.+.|||.+.++-+.++.|.
T Consensus 273 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~r~~~v~~~pDG~Lyv~~d~~G~iy 330 (331)
T PF07995_consen 273 LFVADYGGGRIWRLDLDEDGSVTEEEEFLGGFGGRPRDVAQGPDGALYVSDDSDGKIY 330 (331)
T ss_dssp EEEEETTTTEEEEEEEETTEEEEEEEEECTTSSS-EEEEEEETTSEEEEEE-TTTTEE
T ss_pred EEEecCCCCEEEEEeeecCCCccceEEccccCCCCceEEEEcCCCeEEEEECCCCeEe
Confidence 34444444566655554332221 1 1122333688999999998887777777663
No 410
>TIGR02171 Fb_sc_TIGR02171 Fibrobacter succinogenes paralogous family TIGR02171. This model describes a paralogous family of the rumen bacterium Fibrobacter succinogenes. Eleven members are found in Fibrobacter succinogenes S85, averaging over 900 amino acids in length. More than half are predicted lipoproteins. The function is unknown.
Probab=77.04 E-value=18 Score=23.74 Aligned_cols=52 Identities=10% Similarity=0.065 Sum_probs=34.4
Q ss_pred CcEEEeeCCCceeeee-eeccCCCcEEEEEecCCCCEEEE-EcCCC-----eEEEEEcCCc
Q psy7058 11 QTARIWNTEDFSLVRE-LGTANQRWVWDAAFTLDSKFLLT-ASSDG-----VARLWNIETG 64 (85)
Q Consensus 11 ~~i~~~d~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-----~i~~~~~~~~ 64 (85)
+.|.+-|.....+... +. ...++.+-.|+|||+.++. .+-.+ .|++-++.+.
T Consensus 329 ~~L~~~D~dG~n~~~ve~~--~~~~i~sP~~SPDG~~vAY~ts~e~~~g~s~vYv~~L~t~ 387 (912)
T TIGR02171 329 GNLAYIDYTKGASRAVEIE--DTISVYHPDISPDGKKVAFCTGIEGLPGKSSVYVRNLNAS 387 (912)
T ss_pred CeEEEEecCCCCceEEEec--CCCceecCcCCCCCCEEEEEEeecCCCCCceEEEEehhcc
Confidence 4677777665554433 33 5667888999999999887 33322 4788787643
No 411
>PF08801 Nucleoporin_N: Nup133 N terminal like; InterPro: IPR014908 Nucleoporins are the main components of the nuclear pore complex (NPC) in eukaryotic cells, and mediate bidirectional nucleocytoplasmic transport, especially of mRNA and proteins. RNA undergoing nuclear export first encounters the basket of the nuclear pore and many nucleoporins are accessible on the basket side of the pore [, ]. This entry represents the N-terminal of Nucleoprotein which forms a seven-bladed beta propeller structure []. ; PDB: 1XKS_A.
Probab=76.86 E-value=8.3 Score=22.31 Aligned_cols=29 Identities=24% Similarity=0.541 Sum_probs=24.4
Q ss_pred EEEEEecCCCCEEEEEcCCCeEEEEEcCC
Q psy7058 35 VWDAAFTLDSKFLLTASSDGVARLWNIET 63 (85)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 63 (85)
+..+...+..+.+++...++.|.+|++..
T Consensus 192 I~~v~~d~~r~~ly~l~~~~~Iq~w~l~~ 220 (422)
T PF08801_consen 192 IVQVAVDPSRRLLYTLTSDGSIQVWDLGP 220 (422)
T ss_dssp EEEEEEETTTTEEEEEESSE-EEEEEE-S
T ss_pred eeeEEecCCcCEEEEEeCCCcEEEEEEeC
Confidence 88888888889999999999999999964
No 412
>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []. RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].
Probab=76.66 E-value=17 Score=23.19 Aligned_cols=81 Identities=15% Similarity=0.189 Sum_probs=47.6
Q ss_pred ceeEEeeCCCcEEEeeCCCc--------------------eeeeeeeccCCCcEEEEEec--CCCCEEEEEcCCCeEEEE
Q psy7058 2 GLLATTSADQTARIWNTEDF--------------------SLVRELGTANQRWVWDAAFT--LDSKFLLTASSDGVARLW 59 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~--------------------~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~i~~~ 59 (85)
+.|+.+..||.+.+|.+.+- ++...+. -...++.++++ ...+++|.++-...|.+|
T Consensus 115 EVLl~c~DdG~V~~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~~~--v~~SaWGLdIh~~~~~rlIAVSsNs~~VTVF 192 (717)
T PF08728_consen 115 EVLLLCTDDGDVLAYYTETIIEAIERFSEDNDSGFSRLKIKPFFHLR--VGASAWGLDIHDYKKSRLIAVSSNSQEVTVF 192 (717)
T ss_pred eEEEEEecCCeEEEEEHHHHHHHHHhhccccccccccccCCCCeEee--cCCceeEEEEEecCcceEEEEecCCceEEEE
Confidence 45788999999999976210 0111111 23457888887 667777777767777777
Q ss_pred EcCCc--ccc-ccccccccceeEEEEeC
Q psy7058 60 NIETG--EVD-KEYSGHQKAITSLAFCD 84 (85)
Q Consensus 60 ~~~~~--~~~-~~~~~~~~~v~~~~~~~ 84 (85)
-.... +.. ..-..+...|-+++|-+
T Consensus 193 af~l~~~r~~~~~s~~~~hNIP~VSFl~ 220 (717)
T PF08728_consen 193 AFALVDERFYHVPSHQHSHNIPNVSFLD 220 (717)
T ss_pred EEeccccccccccccccccCCCeeEeec
Confidence 55432 111 11112456666777644
No 413
>PF01731 Arylesterase: Arylesterase; InterPro: IPR002640 The serum paraoxonases/arylesterases are enzymes that catalyse the hydrolysis of the toxic metabolites of a variety of organophosphorus insecticides. The enzymes hydrolyse a broad spectrum of organophosphate substrates, including paraoxon and a number of aromatic carboxylic acid esters (e.g., phenyl acetate), and hence confer resistance to organophosphate toxicity []. Mammals have 3 distinct paraoxonase types, termed PON1-3 [, ]. In mice and humans, the PON genes are found on the same chromosome in close proximity. PON activity has been found in variety of tissues, with highest levels in liver and serum - the source of serum PON is thought to be the liver. Unlike mammals, fish and avian species lack paraoxonase activity. Human and rabbit PONs appear to have two distinct Ca2+ binding sites, one required for stability and one required for catalytic activity. The Ca2+ dependency of PONs suggests a mechanism of hydrolysis where Ca2+ acts as the electrophillic catalyst, like that proposed for phospholipase A2. The paraoxonase enzymes, PON1 and PON3, are high density lipoprotein (HDL)- associated proteins capable of preventing oxidative modification of low density lipoproteins (LPL) []. Although PON2 has oxidative properties, the enzyme does not associate with HDL. Within a given species, PON1, PON2 and PON3 share ~60% amino acid sequence identity, whereas between mammalian species particular PONs (1,2 or 3) share 79-90% identity at the amino acid level. Human PON1 and PON3 share numerous conserved phosphorylation and N-glycosylation sites; however, it is not known whether the PON proteins are modified at these sites, or whether modification at these sites is required for activity in vivo []. This family consists of arylesterases (Also known as serum paraoxonase) 3.1.1.2 from EC. These enzymes hydrolyse organophosphorus esters such as paraoxon and are found in the liver and blood. They confer resistance to organophosphate toxicity []. Human arylesterase (PON1) P27169 from SWISSPROT is associated with HDL and may protect against LDL oxidation [].; GO: 0004064 arylesterase activity
Probab=76.65 E-value=5.6 Score=17.75 Aligned_cols=30 Identities=20% Similarity=0.259 Sum_probs=22.5
Q ss_pred CcEEEEEecCCCCEEEEEc-CCCeEEEEEcC
Q psy7058 33 RWVWDAAFTLDSKFLLTAS-SDGVARLWNIE 62 (85)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~ 62 (85)
...+.|..+|+++.+..++ ..+.|+++..+
T Consensus 54 ~~aNGI~~s~~~k~lyVa~~~~~~I~vy~~~ 84 (86)
T PF01731_consen 54 SFANGIAISPDKKYLYVASSLAHSIHVYKRH 84 (86)
T ss_pred CCCceEEEcCCCCEEEEEeccCCeEEEEEec
Confidence 3467899999988876554 56789988764
No 414
>PHA02713 hypothetical protein; Provisional
Probab=75.13 E-value=16 Score=22.27 Aligned_cols=25 Identities=16% Similarity=0.282 Sum_probs=18.5
Q ss_pred CCCEEEEEcCCC--eEEEEEcCCcccc
Q psy7058 43 DSKFLLTASSDG--VARLWNIETGEVD 67 (85)
Q Consensus 43 ~~~~~~~~~~~~--~i~~~~~~~~~~~ 67 (85)
++...+.|+.++ .+..||..+.+-.
T Consensus 512 ~~~iyv~Gg~~~~~~~e~yd~~~~~W~ 538 (557)
T PHA02713 512 DNTIMMLHCYESYMLQDTFNVYTYEWN 538 (557)
T ss_pred CCEEEEEeeecceeehhhcCccccccc
Confidence 778888888777 6777887766543
No 415
>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length. This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.
Probab=73.22 E-value=20 Score=22.50 Aligned_cols=48 Identities=19% Similarity=0.234 Sum_probs=28.6
Q ss_pred EEEEecCCCCEEEEEcCCCeEEEEEcCCcccccccc-ccccceeEEEEe
Q psy7058 36 WDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYS-GHQKAITSLAFC 83 (85)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~v~~~~~~ 83 (85)
..+.-+.-++..+.-+....+.|||.+.+.....-. ...+.|.++.|.
T Consensus 33 ~li~gss~~k~a~V~~~~~~LtIWD~~~~~lE~~~~f~~~~~I~dLDWt 81 (631)
T PF12234_consen 33 SLISGSSIKKIAVVDSSRSELTIWDTRSGVLEYEESFSEDDPIRDLDWT 81 (631)
T ss_pred ceEeecccCcEEEEECCCCEEEEEEcCCcEEEEeeeecCCCceeeceee
Confidence 333334445444444455689999998876432221 346778887775
No 416
>PF10214 Rrn6: RNA polymerase I-specific transcription-initiation factor; InterPro: IPR019350 RNA polymerase I-specific transcription-initiation factor Rrn6 and Rrn7 represent components of a multisubunit transcription factor essential for the initiation of rDNA transcription by Pol I []. These proteins are found in fungi.
Probab=73.03 E-value=10 Score=24.03 Aligned_cols=29 Identities=24% Similarity=0.322 Sum_probs=25.3
Q ss_pred CcEEEEEecC-CCCEEEEEcCCCeEEEEEc
Q psy7058 33 RWVWDAAFTL-DSKFLLTASSDGVARLWNI 61 (85)
Q Consensus 33 ~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~ 61 (85)
.+..+++|+| +...+|..+..|...+|++
T Consensus 146 ~~~aDv~FnP~~~~q~AiVD~~G~Wsvw~i 175 (765)
T PF10214_consen 146 FPHADVAFNPWDQRQFAIVDEKGNWSVWDI 175 (765)
T ss_pred CccceEEeccCccceEEEEeccCcEEEEEe
Confidence 4567899998 5678999999999999999
No 417
>KOG3630|consensus
Probab=71.35 E-value=4.6 Score=26.93 Aligned_cols=80 Identities=14% Similarity=0.049 Sum_probs=45.6
Q ss_pred EEeeCCCcEEEeeCCCceeeee-----e-----eccCCCcEEEEEecCCCC-EEEEEcCCCeEEEEEcCCcccccccccc
Q psy7058 5 ATTSADQTARIWNTEDFSLVRE-----L-----GTANQRWVWDAAFTLDSK-FLLTASSDGVARLWNIETGEVDKEYSGH 73 (85)
Q Consensus 5 ~~~~~~~~i~~~d~~~~~~~~~-----~-----~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 73 (85)
...+++..|..||+++...... + .........++.|+|.-. ..+....|+.|++..+.......+--..
T Consensus 118 ~~tsng~~v~~fD~~~fs~s~~~~~~pl~~s~ts~ek~vf~~~~~wnP~vp~n~av~l~dlsl~V~~~~~~~~~v~s~p~ 197 (1405)
T KOG3630|consen 118 VSTSNGEAVYSFDLEEFSESRYETTVPLKNSATSFEKPVFQLKNVWNPLVPLNSAVDLSDLSLRVKSTKQLAQNVTSFPV 197 (1405)
T ss_pred EEecCCceEEEEehHhhhhhhhhhccccccccchhccccccccccccCCccchhhhhccccchhhhhhhhhhhhhcccCc
Confidence 3444556788899875432220 0 001223456778888543 4566667888888877654332222124
Q ss_pred ccceeEEEEeC
Q psy7058 74 QKAITSLAFCD 84 (85)
Q Consensus 74 ~~~v~~~~~~~ 84 (85)
....++++|+|
T Consensus 198 t~~~Tav~WSp 208 (1405)
T KOG3630|consen 198 TNSQTAVLWSP 208 (1405)
T ss_pred ccceeeEEecc
Confidence 56678888876
No 418
>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=71.00 E-value=17 Score=20.66 Aligned_cols=70 Identities=16% Similarity=0.282 Sum_probs=38.1
Q ss_pred EEEeeCCCceeeeeeeccCC-CcEEEEEecCCCCEEEEEcC-----CCeEEEEEcCCc-cccccccccccceeEEEE
Q psy7058 13 ARIWNTEDFSLVRELGTANQ-RWVWDAAFTLDSKFLLTASS-----DGVARLWNIETG-EVDKEYSGHQKAITSLAF 82 (85)
Q Consensus 13 i~~~d~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-----~~~i~~~~~~~~-~~~~~~~~~~~~v~~~~~ 82 (85)
..++|......+..+..... ..--.-.|++||.++...-. -|.|-+||.+.+ +.+.++..|.-.-..+.|
T Consensus 93 ~~vfD~~~~~~pv~~~s~~~RHfyGHGvfs~dG~~LYATEndfd~~rGViGvYd~r~~fqrvgE~~t~GiGpHev~l 169 (366)
T COG3490 93 AMVFDPNGAQEPVTLVSQEGRHFYGHGVFSPDGRLLYATENDFDPNRGVIGVYDAREGFQRVGEFSTHGIGPHEVTL 169 (366)
T ss_pred EEEECCCCCcCcEEEecccCceeecccccCCCCcEEEeecCCCCCCCceEEEEecccccceecccccCCcCcceeEE
Confidence 44566655544444332111 11122458999998876432 368999999754 334455555444444444
No 419
>PF12657 TFIIIC_delta: Transcription factor IIIC subunit delta N-term; InterPro: IPR024761 This entry represents a domain found towards the N terminus of the 90 kDa subunit of transcription factor IIIC (also known as subunit 9 in yeast []). The whole subunit is involved in RNA polymerase III-mediated transcription. It is possible that this N-terminal domain interacts with TFIIIC subunit 8 [].
Probab=69.35 E-value=13 Score=18.71 Aligned_cols=29 Identities=24% Similarity=0.252 Sum_probs=23.8
Q ss_pred cEEEEEecCC------CCEEEEEcCCCeEEEEEcC
Q psy7058 34 WVWDAAFTLD------SKFLLTASSDGVARLWNIE 62 (85)
Q Consensus 34 ~~~~~~~~~~------~~~~~~~~~~~~i~~~~~~ 62 (85)
.+..+.|+|. +..|+....++.+.+|...
T Consensus 87 ~vv~~aWSP~Gl~~~~rClLavLTs~~~l~l~~~~ 121 (173)
T PF12657_consen 87 QVVSAAWSPSGLGPNGRCLLAVLTSNGRLSLYGPP 121 (173)
T ss_pred cEEEEEECCCCCCCCCceEEEEEcCCCeEEEEecC
Confidence 5788999994 3468888999999999865
No 420
>TIGR03054 photo_alph_chp1 putative photosynthetic complex assembly protein. In twenty or so anoxygenic photosynthetic alpha-Proteobacteria known so far, a gene for a member of this protein family is present and is found in the vicinity of puhA, which encodes a component of the photosynthetic reaction center, and other genes associated with photosynthesis. This protein family is suggested, consequently, as a probable assembly factor for the photosynthetic reaction center, but its seems its actual function has not yet been demonstrated.
Probab=68.92 E-value=12 Score=18.33 Aligned_cols=63 Identities=24% Similarity=0.215 Sum_probs=44.9
Q ss_pred eEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEE-----------EEecCCCCEEEEEcCCCeEEEEEcCCccc
Q psy7058 4 LATTSADQTARIWNTEDFSLVRELGTANQRWVWD-----------AAFTLDSKFLLTASSDGVARLWNIETGEV 66 (85)
Q Consensus 4 l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 66 (85)
.+....|+.+.+++..+++.+..+.....+-+.. .....+..+.++--.||.+.+-|..++..
T Consensus 44 ~f~d~~~G~v~V~~~~~G~~va~~~~g~~GFvrgvlR~l~R~R~~~gv~~~~Pf~L~r~~dGrltL~Dp~Tg~~ 117 (135)
T TIGR03054 44 VFEDRPDGAVAVVETPDGRLVAILEPGQNGFVRVMLRGLARARARAGVAAEPPFRLTRYDNGRLTLTDPATGWS 117 (135)
T ss_pred EEecCCCCeEEEEECCCCCEEEEecCCCCchhhHhHHHHHHHHHHcCCCCCCCEEEEEEeCCcEEEEcCCCCcE
Confidence 4566788999999999999998886544332221 22345677778888889999988877653
No 421
>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases. The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....
Probab=66.96 E-value=21 Score=20.15 Aligned_cols=48 Identities=17% Similarity=0.374 Sum_probs=30.7
Q ss_pred EEEEEecCCCCEEEEEcCCCeEEEEEcCCccc---ccc----ccccccceeEEEEeC
Q psy7058 35 VWDAAFTLDSKFLLTASSDGVARLWNIETGEV---DKE----YSGHQKAITSLAFCD 84 (85)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~---~~~----~~~~~~~v~~~~~~~ 84 (85)
-+.++|.|++..+++ ...|.|++++ ..+.. +.. ..........++++|
T Consensus 4 P~~~a~~pdG~l~v~-e~~G~i~~~~-~~g~~~~~v~~~~~v~~~~~~gllgia~~p 58 (331)
T PF07995_consen 4 PRSMAFLPDGRLLVA-ERSGRIWVVD-KDGSLKTPVADLPEVFADGERGLLGIAFHP 58 (331)
T ss_dssp EEEEEEETTSCEEEE-ETTTEEEEEE-TTTEECEEEEE-TTTBTSTTBSEEEEEE-T
T ss_pred ceEEEEeCCCcEEEE-eCCceEEEEe-CCCcCcceecccccccccccCCcccceecc
Confidence 467899999988776 4599999998 33332 111 223345667777776
No 422
>PF11635 Med16: Mediator complex subunit 16; InterPro: IPR021665 Mediator is a large complex of up to 33 proteins that is conserved from plants through fungi to humans - the number and representation of individual subunits varying with species [],[]. It is arranged into four different sections, a core, a head, a tail and a kinase-activity part, and the number of subunits within each of these is what varies with species. Overall, Mediator regulates the transcriptional activity of RNA polymerase II but it would appear that each of the four different sections has a slightly different function. Med16 is one of the subunits of the Tail portion of the Mediator complex and is required for lipopolysaccharide gene-expression []. Several members including the human protein, Q9Y2X0 from SWISSPROT, have one or more WD40 domains on them, PF00400 from PFAM.
Probab=66.78 E-value=31 Score=22.13 Aligned_cols=56 Identities=14% Similarity=0.110 Sum_probs=38.6
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeee----ec----------cC----CCcEEEEEecCCCCEEEEEcCCCeEE
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVREL----GT----------AN----QRWVWDAAFTLDSKFLLTASSDGVAR 57 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~----~~----------~~----~~~~~~~~~~~~~~~~~~~~~~~~i~ 57 (85)
..++..-.||.|.++|..+.+..... .. +. ......+++||.+..++.-+.++.+.
T Consensus 272 ~~v~~~~~DGsI~~~dr~t~~~~~~~~~~~~~~~~v~s~~~~Gf~fp~~~~~~~vafSPt~c~~v~~~~~~~~~ 345 (753)
T PF11635_consen 272 IVVAFAFSDGSIEFRDRNTMKELNETRTNGEPPNTVTSLFQAGFHFPCIQPPLHVAFSPTMCSLVQIDEDGKTK 345 (753)
T ss_pred cEEEEEEcCCeEEEEecCcchhhcccccccCCccccccccccccccccCCCCceEEECcccceEEEEecCCCce
Confidence 35788889999999999887555443 10 00 11233478999999888888887754
No 423
>PF08309 LVIVD: LVIVD repeat; InterPro: IPR013211 This repeat is found in bacterial and archaeal cell surface proteins, many of which are hypothetical. The secondary structure corresponding to this repeat is predicted to comprise 4 beta-strands, which may associate to form a beta-propeller. The repeat copy number varies from 2-14. This repeat is sometimes found with the PKD domain IPR000601 from INTERPRO.
Probab=66.62 E-value=7.3 Score=14.79 Aligned_cols=25 Identities=8% Similarity=-0.121 Sum_probs=15.3
Q ss_pred CceeEEeeCCCcEEEeeCCCceeee
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVR 25 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~ 25 (85)
|+++..+..++-+.+.|+.+...+.
T Consensus 11 g~yaYva~~~~Gl~IvDISnPs~P~ 35 (42)
T PF08309_consen 11 GNYAYVADGNNGLVIVDISNPSNPV 35 (42)
T ss_pred CCEEEEEeCCCCEEEEECCCCCCCE
Confidence 3455556566667788887654433
No 424
>COG1520 FOG: WD40-like repeat [Function unknown]
Probab=66.21 E-value=22 Score=20.20 Aligned_cols=69 Identities=13% Similarity=0.005 Sum_probs=38.8
Q ss_pred eeEEeeCCCcEEEeeCCCceeeeeeeccC-CCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccc
Q psy7058 3 LLATTSADQTARIWNTEDFSLVRELGTAN-QRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSG 72 (85)
Q Consensus 3 ~l~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 72 (85)
.+..+..++.+.-.|..++...-...... ...+..-....+|+ ++.++.++.++.+|..++........
T Consensus 70 ~v~~~~~~G~i~A~d~~~g~~~W~~~~~~~~~~~~~~~~~~~G~-i~~g~~~g~~y~ld~~~G~~~W~~~~ 139 (370)
T COG1520 70 TVYVGTRDGNIFALNPDTGLVKWSYPLLGAVAQLSGPILGSDGK-IYVGSWDGKLYALDASTGTLVWSRNV 139 (370)
T ss_pred eEEEecCCCcEEEEeCCCCcEEecccCcCcceeccCceEEeCCe-EEEecccceEEEEECCCCcEEEEEec
Confidence 45556677778878887777543222111 01111111122565 66667777888888877776655543
No 425
>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []. RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].
Probab=66.18 E-value=32 Score=22.08 Aligned_cols=60 Identities=13% Similarity=0.170 Sum_probs=37.0
Q ss_pred ceeEEeeCCCcEEEeeCCCc--eeeeeeeccCCCcEEEEEecCC-----CC-EEEEEcCCCeEEEEEc
Q psy7058 2 GLLATTSADQTARIWNTEDF--SLVRELGTANQRWVWDAAFTLD-----SK-FLLTASSDGVARLWNI 61 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~--~~~~~~~~~~~~~~~~~~~~~~-----~~-~~~~~~~~~~i~~~~~ 61 (85)
+++|++++...|.||-.... +....-...+...|.+++|-++ |. .+++++-.|.+.+|++
T Consensus 178 rlIAVSsNs~~VTVFaf~l~~~r~~~~~s~~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v~~~~I 245 (717)
T PF08728_consen 178 RLIAVSSNSQEVTVFAFALVDERFYHVPSHQHSHNIPNVSFLDDDLDPNGHVKVVATDISGEVWTFKI 245 (717)
T ss_pred eEEEEecCCceEEEEEEeccccccccccccccccCCCeeEeecCCCCCccceEEEEEeccCcEEEEEE
Confidence 46788888888888765432 1111101113344777777653 22 6777888999888887
No 426
>KOG1520|consensus
Probab=66.09 E-value=19 Score=21.00 Aligned_cols=44 Identities=14% Similarity=0.055 Sum_probs=25.6
Q ss_pred EeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEc
Q psy7058 6 TTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTAS 51 (85)
Q Consensus 6 ~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 51 (85)
.+..+|.+.-||..+......+.. -.-.+.++++|++.+++.+-
T Consensus 194 ~g~~~GRl~~YD~~tK~~~VLld~--L~F~NGlaLS~d~sfvl~~E 237 (376)
T KOG1520|consen 194 EGDPTGRLFRYDPSTKVTKVLLDG--LYFPNGLALSPDGSFVLVAE 237 (376)
T ss_pred cCCCccceEEecCcccchhhhhhc--ccccccccCCCCCCEEEEEe
Confidence 334556666667554433222222 12257799999999987653
No 427
>COG4590 ABC-type uncharacterized transport system, permease component [General function prediction only]
Probab=65.70 E-value=28 Score=21.27 Aligned_cols=64 Identities=11% Similarity=0.046 Sum_probs=35.8
Q ss_pred ceeEEeeCCCcEEEe-eCCCc-ee----eeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccc
Q psy7058 2 GLLATTSADQTARIW-NTEDF-SL----VRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEV 66 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~-d~~~~-~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 66 (85)
..++.++.||.+.-| |++.+ .+ ++.++- ...++..+.-..+.+-++.-..+|++..+.....+.
T Consensus 281 ~SLLv~~~dG~vsQWFdvr~~~~p~l~h~R~f~l-~pa~~~~l~pe~~rkgF~~l~~~G~L~~f~st~~~~ 350 (733)
T COG4590 281 FSLLVVHEDGLVSQWFDVRRDGQPHLNHIRNFKL-APAEVQFLLPETNRKGFYSLYRNGTLQSFYSTSEKL 350 (733)
T ss_pred eeEEEEcCCCceeeeeeeecCCCCcceeeecccc-CcccceeeccccccceEEEEcCCCceeeeecccCcc
Confidence 457788889988865 55432 21 111111 223344443333456677778888887776655443
No 428
>PF14269 Arylsulfotran_2: Arylsulfotransferase (ASST)
Probab=65.69 E-value=22 Score=19.91 Aligned_cols=40 Identities=13% Similarity=0.171 Sum_probs=31.4
Q ss_pred cEEEEEecCCCCEEEEEcCCCeEEEEEcCCcccccccccc
Q psy7058 34 WVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGH 73 (85)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 73 (85)
.++++....+|.++++.-.-..|.+.+-++++.+..+.+.
T Consensus 145 HiNsV~~~~~G~yLiS~R~~~~i~~I~~~tG~I~W~lgG~ 184 (299)
T PF14269_consen 145 HINSVDKDDDGDYLISSRNTSTIYKIDPSTGKIIWRLGGK 184 (299)
T ss_pred EeeeeeecCCccEEEEecccCEEEEEECCCCcEEEEeCCC
Confidence 4788888889999998887888988888888766665433
No 429
>KOG3616|consensus
Probab=65.20 E-value=37 Score=22.39 Aligned_cols=32 Identities=16% Similarity=0.146 Sum_probs=26.2
Q ss_pred CcEEEEEecCCCCEEEEEcCCCeEEEEEcCCc
Q psy7058 33 RWVWDAAFTLDSKFLLTASSDGVARLWNIETG 64 (85)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 64 (85)
..+..+.-+|.++-++.+..|+.|.+|+....
T Consensus 15 e~~~aiqshp~~~s~v~~~~d~si~lfn~~~r 46 (1636)
T KOG3616|consen 15 EFTTAIQSHPGGQSFVLAHQDGSIILFNFIPR 46 (1636)
T ss_pred ceeeeeeecCCCceEEEEecCCcEEEEeeccc
Confidence 34667777899999999999999999987543
No 430
>PRK02888 nitrous-oxide reductase; Validated
Probab=65.20 E-value=32 Score=21.72 Aligned_cols=58 Identities=21% Similarity=0.151 Sum_probs=39.9
Q ss_pred eEEeeCCCcEEEeeCCCcee------------eeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCC
Q psy7058 4 LATTSADQTARIWNTEDFSL------------VRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIET 63 (85)
Q Consensus 4 l~~~~~~~~i~~~d~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 63 (85)
++++..+..+.+.|+.+.+. ..+... ...-....|.++|....+.-.|..|-.|++..
T Consensus 336 yVanklS~tVSVIDv~k~k~~~~~~~~~~~~vvaevev--GlGPLHTaFDg~G~aytslf~dsqv~kwn~~~ 405 (635)
T PRK02888 336 IANGKLSPTVTVIDVRKLDDLFDGKIKPRDAVVAEPEL--GLGPLHTAFDGRGNAYTTLFLDSQIVKWNIEA 405 (635)
T ss_pred EEeCCCCCcEEEEEChhhhhhhhccCCccceEEEeecc--CCCcceEEECCCCCEEEeEeecceeEEEehHH
Confidence 45666789999999987553 222222 12234577888888777777888999999865
No 431
>PF10433 MMS1_N: Mono-functional DNA-alkylating methyl methanesulfonate N-term; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 2B5N_C 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A ....
Probab=65.02 E-value=28 Score=20.88 Aligned_cols=70 Identities=17% Similarity=0.222 Sum_probs=34.4
Q ss_pred EEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCcccccccc-----ccccceeEEEEeC
Q psy7058 13 ARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYS-----GHQKAITSLAFCD 84 (85)
Q Consensus 13 i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-----~~~~~v~~~~~~~ 84 (85)
+++.+....+............|...+. .+..++.+..++.+..+.+.......... .....|.|+..+|
T Consensus 429 i~l~~~~~~~~~~~w~~~~~~~I~~a~~--~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eis~l~i~p 503 (504)
T PF10433_consen 429 IRLIDLEDGKLTQEWKPPAGSIIVAASI--NDPQVLVALSGGELVYFELDDNKISVSDNDETILELDNEISCLSIEP 503 (504)
T ss_dssp EEEEESSSTSEEEEEE-TTS---SEEEE--SSSEEEEEE-TTEEEEEEEETTEEEEEEE----EE-SS-EEEEE---
T ss_pred EEEEECCCCeEEEEEeCCCCCeEEEEEE--CCCEEEEEEeCCcEEEEEEECCceeeeeeccccccCCCceEEEEeCC
Confidence 5566655555554443323334555544 34566666677888888876554432211 1457888888776
No 432
>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....
Probab=62.05 E-value=29 Score=20.03 Aligned_cols=53 Identities=13% Similarity=0.046 Sum_probs=32.3
Q ss_pred CcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcC-----------CCeEEEEEcCCcc
Q psy7058 11 QTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASS-----------DGVARLWNIETGE 65 (85)
Q Consensus 11 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~i~~~~~~~~~ 65 (85)
..++++|+.+++.+..... .. ....+.|.++++.++.... ...|+.|.+.+..
T Consensus 150 ~~l~v~Dl~tg~~l~d~i~-~~-~~~~~~W~~d~~~~~y~~~~~~~~~~~~~~~~~v~~~~~gt~~ 213 (414)
T PF02897_consen 150 YTLRVFDLETGKFLPDGIE-NP-KFSSVSWSDDGKGFFYTRFDEDQRTSDSGYPRQVYRHKLGTPQ 213 (414)
T ss_dssp EEEEEEETTTTEEEEEEEE-EE-ESEEEEECTTSSEEEEEECSTTTSS-CCGCCEEEEEEETTS-G
T ss_pred EEEEEEECCCCcCcCCccc-cc-ccceEEEeCCCCEEEEEEeCcccccccCCCCcEEEEEECCCCh
Confidence 3488999999876653321 11 1223999999887665432 2347777776553
No 433
>PF00843 Arena_nucleocap: Arenavirus nucleocapsid protein; InterPro: IPR000229 Arenaviruses are single stranded RNA viruses. The arenavirus S RNAs that have been characterised include conserved terminal sequences, an ambisense arrangement of the coding regions for the precursor glycoprotein (GPC) and nucleocapsid (N) proteins and an intergenic region capable of forming a base-paired "hairpin" structure. The mature glycoproteins that result are G1 and G2 and the N protein []. This family represents the nucleocapsid protein that encapsulates the viral ssRNA [].; GO: 0019013 viral nucleocapsid; PDB: 3MX5_A 3MX2_C 3MWT_C 3Q7C_A 3MWP_B 3Q7B_A 3T5Q_E 3T5N_A 3R3L_B.
Probab=61.76 E-value=5.2 Score=23.68 Aligned_cols=19 Identities=21% Similarity=0.639 Sum_probs=10.4
Q ss_pred EEcCCCeEEEEEcCCcccc
Q psy7058 49 TASSDGVARLWNIETGEVD 67 (85)
Q Consensus 49 ~~~~~~~i~~~~~~~~~~~ 67 (85)
-+..+|.+++||+++...+
T Consensus 147 ~~~~~GVVrvWDvkd~~lL 165 (533)
T PF00843_consen 147 RGGRNGVVRVWDVKDPSLL 165 (533)
T ss_dssp ---SSSEE-SEE-S-GGGG
T ss_pred CCCCCCeEEEEecCCHHHH
Confidence 3467899999999876543
No 434
>PRK10115 protease 2; Provisional
Probab=60.53 E-value=41 Score=21.36 Aligned_cols=33 Identities=27% Similarity=0.184 Sum_probs=23.8
Q ss_pred cEEEEEecCCCCEEEEEcC-C----CeEEEEEcCCccc
Q psy7058 34 WVWDAAFTLDSKFLLTASS-D----GVARLWNIETGEV 66 (85)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~-~----~~i~~~~~~~~~~ 66 (85)
.+..+.++|++++++.+.+ + ..+++.|+.++..
T Consensus 128 ~l~~~~~Spdg~~la~~~d~~G~E~~~l~v~d~~tg~~ 165 (686)
T PRK10115 128 TLGGMAITPDNTIMALAEDFLSRRQYGIRFRNLETGNW 165 (686)
T ss_pred EEeEEEECCCCCEEEEEecCCCcEEEEEEEEECCCCCC
Confidence 4667889999998876533 2 3688889887753
No 435
>KOG1983|consensus
Probab=58.74 E-value=33 Score=22.94 Aligned_cols=26 Identities=19% Similarity=0.630 Sum_probs=22.9
Q ss_pred cCCCCEEEEEcCCCeEEEEEcCCccc
Q psy7058 41 TLDSKFLLTASSDGVARLWNIETGEV 66 (85)
Q Consensus 41 ~~~~~~~~~~~~~~~i~~~~~~~~~~ 66 (85)
.+++..++++..|+.+.+||...+..
T Consensus 243 ~~~~~~~v~~h~Dgs~~fWd~s~g~~ 268 (993)
T KOG1983|consen 243 SRDGSHFVSYHTDGSYAFWDVSSGKL 268 (993)
T ss_pred ccCCceEEEEEecCCEEeeecCCCce
Confidence 66799999999999999999988743
No 436
>KOG2727|consensus
Probab=58.66 E-value=27 Score=23.32 Aligned_cols=38 Identities=13% Similarity=0.055 Sum_probs=30.0
Q ss_pred EEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccc
Q psy7058 35 VWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSG 72 (85)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 72 (85)
-..++.+|+|++.+..+.=+.|.+.|+.....++.+++
T Consensus 324 ge~lslSP~gtlAAVTD~lgRVlLlDta~~ivvr~wKG 361 (1244)
T KOG2727|consen 324 GEKLSLSPSGTLAAVTDSLGRVLLLDTAALIVVRLWKG 361 (1244)
T ss_pred cceeeeCCCccEEEEecccCcEEEEehhhhhHHHHhcc
Confidence 34688999999999888888999999877766655554
No 437
>PF10214 Rrn6: RNA polymerase I-specific transcription-initiation factor; InterPro: IPR019350 RNA polymerase I-specific transcription-initiation factor Rrn6 and Rrn7 represent components of a multisubunit transcription factor essential for the initiation of rDNA transcription by Pol I []. These proteins are found in fungi.
Probab=57.19 E-value=50 Score=21.30 Aligned_cols=64 Identities=14% Similarity=0.085 Sum_probs=39.8
Q ss_pred ceeEEeeCCCcEEEeeCCCcee----eeeee----c------cCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccc
Q psy7058 2 GLLATTSADQTARIWNTEDFSL----VRELG----T------ANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEV 66 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~----~~~~~----~------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 66 (85)
+.+|.....|...+|++..... ..... + ........+.|.++...++.++.. .+.++|+.+...
T Consensus 159 ~q~AiVD~~G~Wsvw~i~~~~~~~~~~~~~~~~~~gsi~~d~~e~s~w~rI~W~~~~~~lLv~~r~-~l~~~d~~~~~~ 236 (765)
T PF10214_consen 159 RQFAIVDEKGNWSVWDIKGRPKRKSSNLRLSRNISGSIIFDPEELSNWKRILWVSDSNRLLVCNRS-KLMLIDFESNWQ 236 (765)
T ss_pred ceEEEEeccCcEEEEEeccccccCCcceeeccCCCccccCCCcccCcceeeEecCCCCEEEEEcCC-ceEEEECCCCCc
Confidence 4688999999999999921110 11111 0 011234578898887777776554 667788876644
No 438
>PF10584 Proteasome_A_N: Proteasome subunit A N-terminal signature; InterPro: IPR000426 The proteasome (or macropain) (3.4.25.1 from EC) [, , , , ] is a eukaryotic and archaeal multicatalytic proteinase complex that seems to be involved in an ATP/ubiquitin-dependent nonlysosomal proteolytic pathway. In eukaryotes the proteasome is composed of about 28 distinct subunits which form a highly ordered ring-shaped structure (20S ring) of about 700 kDa. Most proteasome subunits can be classified, on the basis on sequence similarities into two groups, alpha (A) and beta (B). This family contains the alpha subunit sequences which range from 210 to 290 amino acids. These sequences are classified as non-peptidase homologues in MEROPS peptidase family T1 (clan PB(T)). ; GO: 0004175 endopeptidase activity, 0006511 ubiquitin-dependent protein catabolic process, 0019773 proteasome core complex, alpha-subunit complex; PDB: 3H4P_M 1IRU_O 3UN4_U 1FNT_A 3OEV_G 3OEU_U 3SDK_U 3DY3_G 3MG7_G 3L5Q_C ....
Probab=56.54 E-value=5 Score=13.21 Aligned_cols=7 Identities=29% Similarity=0.762 Sum_probs=4.0
Q ss_pred ecCCCCE
Q psy7058 40 FTLDSKF 46 (85)
Q Consensus 40 ~~~~~~~ 46 (85)
|||+|++
T Consensus 8 FSp~Grl 14 (23)
T PF10584_consen 8 FSPDGRL 14 (23)
T ss_dssp BBTTSSB
T ss_pred ECCCCeE
Confidence 5666653
No 439
>COG3391 Uncharacterized conserved protein [Function unknown]
Probab=54.41 E-value=41 Score=19.46 Aligned_cols=54 Identities=9% Similarity=0.110 Sum_probs=38.4
Q ss_pred CCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEc-CCCeEEEEEcCCcc
Q psy7058 10 DQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTAS-SDGVARLWNIETGE 65 (85)
Q Consensus 10 ~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~ 65 (85)
++.+.+.|..+.+......... .+ ..+.+.|+|..+.... .++.+.+.|.....
T Consensus 139 ~~~vsvid~~t~~~~~~~~vG~-~P-~~~a~~p~g~~vyv~~~~~~~v~vi~~~~~~ 193 (381)
T COG3391 139 NNTVSVIDAATNKVTATIPVGN-TP-TGVAVDPDGNKVYVTNSDDNTVSVIDTSGNS 193 (381)
T ss_pred CceEEEEeCCCCeEEEEEecCC-Cc-ceEEECCCCCeEEEEecCCCeEEEEeCCCcc
Confidence 5777788878777777654422 23 7899999999766554 67889999965443
No 440
>smart00036 CNH Domain found in NIK1-like kinases, mouse citron and yeast ROM1, ROM2. Unpublished observations.
Probab=54.12 E-value=38 Score=18.94 Aligned_cols=58 Identities=14% Similarity=0.073 Sum_probs=35.4
Q ss_pred ceeEEeeCCCcEEEeeCCCc-eeeeeeeccCCCcEEEEEecCCCCEEEE-EcCCCeEEEEEcC
Q psy7058 2 GLLATTSADQTARIWNTEDF-SLVRELGTANQRWVWDAAFTLDSKFLLT-ASSDGVARLWNIE 62 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~ 62 (85)
++|+.|.++|.. +.+.... .....+. ....+..+.+...-..+++ .+....++.+++.
T Consensus 14 ~~lL~GTe~Gly-~~~~~~~~~~~~kl~--~~~~v~q~~v~~~~~lLi~Lsgk~~~L~~~~L~ 73 (302)
T smart00036 14 KWLLVGTEEGLY-VLNISDQPGTLEKLI--GRRSVTQIWVLEENNVLLMISGKKPQLYSHPLS 73 (302)
T ss_pred cEEEEEeCCceE-EEEcccCCCCeEEec--CcCceEEEEEEhhhCEEEEEeCCcceEEEEEHH
Confidence 477888887744 4455432 2223322 3456888888877666554 4445569999884
No 441
>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea. The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.
Probab=52.68 E-value=51 Score=20.01 Aligned_cols=51 Identities=8% Similarity=0.259 Sum_probs=26.7
Q ss_pred CCCcEEEeeCCCceeeeeeeccCCC-cEEEEEecC--CCCE-EEEEcCCCeEEEE
Q psy7058 9 ADQTARIWNTEDFSLVRELGTANQR-WVWDAAFTL--DSKF-LLTASSDGVARLW 59 (85)
Q Consensus 9 ~~~~i~~~d~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~-~~~~~~~~~i~~~ 59 (85)
....+.+||+.+.+..+.+..+... ...-++|.+ +..+ ++.+.....|..|
T Consensus 220 yG~~l~vWD~~~r~~~Q~idLg~~g~~pLEvRflH~P~~~~gFvg~aLss~i~~~ 274 (461)
T PF05694_consen 220 YGHSLHVWDWSTRKLLQTIDLGEEGQMPLEVRFLHDPDANYGFVGCALSSSIWRF 274 (461)
T ss_dssp S--EEEEEETTTTEEEEEEES-TTEEEEEEEEE-SSTT--EEEEEEE--EEEEEE
T ss_pred ccCeEEEEECCCCcEeeEEecCCCCCceEEEEecCCCCccceEEEEeccceEEEE
Confidence 4568999999999999988764332 344555544 4444 3333334444333
No 442
>PF14727 PHTB1_N: PTHB1 N-terminus
Probab=52.39 E-value=49 Score=19.75 Aligned_cols=57 Identities=18% Similarity=0.203 Sum_probs=37.6
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeecc-CCCcEEEEEecCCCCEEEEEcCCCeEEEEEc
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTA-NQRWVWDAAFTLDSKFLLTASSDGVARLWNI 61 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 61 (85)
.+++.-+.||.+.+++-........+... .+ -.+.+.+....+++++.+..+..|..
T Consensus 146 ~~IcVQS~DG~L~~feqe~~~f~~~lp~~llP---gPl~Y~~~tDsfvt~sss~~l~~Yky 203 (418)
T PF14727_consen 146 DFICVQSMDGSLSFFEQESFAFSRFLPDFLLP---GPLCYCPRTDSFVTASSSWTLECYKY 203 (418)
T ss_pred eEEEEEecCceEEEEeCCcEEEEEEcCCCCCC---cCeEEeecCCEEEEecCceeEEEecH
Confidence 46788899999999997654433333321 22 23556667777888877777777764
No 443
>PRK14751 tetracycline resistance determinant leader peptide; Provisional
Probab=51.89 E-value=12 Score=12.58 Aligned_cols=11 Identities=27% Similarity=0.549 Sum_probs=7.6
Q ss_pred cCCCeEEEEEc
Q psy7058 51 SSDGVARLWNI 61 (85)
Q Consensus 51 ~~~~~i~~~~~ 61 (85)
.+|+.|.-||.
T Consensus 12 psdksi~hwdf 22 (28)
T PRK14751 12 PSDKSIYHWDF 22 (28)
T ss_pred CCcCceeeeee
Confidence 35677788875
No 444
>COG4247 Phy 3-phytase (myo-inositol-hexaphosphate 3-phosphohydrolase) [Lipid metabolism]
Probab=51.42 E-value=39 Score=19.01 Aligned_cols=28 Identities=18% Similarity=0.453 Sum_probs=21.7
Q ss_pred EEEEEecCCCCEEEEEcCCCeEEEEEcC
Q psy7058 35 VWDAAFTLDSKFLLTASSDGVARLWNIE 62 (85)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 62 (85)
|+--.-+|+.+.+++....+-+++||+.
T Consensus 58 IwVh~t~P~kS~vItt~Kk~Gl~VYDLs 85 (364)
T COG4247 58 IWVHATNPDKSLVITTVKKAGLRVYDLS 85 (364)
T ss_pred eEeccCCcCcceEEEeeccCCeEEEecC
Confidence 4444456788888888888899999984
No 445
>KOG4441|consensus
Probab=51.40 E-value=58 Score=20.28 Aligned_cols=61 Identities=15% Similarity=0.140 Sum_probs=32.6
Q ss_pred ceeEEeeCC------CcEEEeeCCCceeeeeeeccCCCcEEEEEe-cCCCCEEEEEcCCC-----eEEEEEcCCc
Q psy7058 2 GLLATTSAD------QTARIWNTEDFSLVRELGTANQRWVWDAAF-TLDSKFLLTASSDG-----VARLWNIETG 64 (85)
Q Consensus 2 ~~l~~~~~~------~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-----~i~~~~~~~~ 64 (85)
..+++|+.+ ..+..||..+.+ ...... ....-..... .-+|...+.|+.++ .+..||..+.
T Consensus 334 ~lYv~GG~~~~~~~l~~ve~YD~~~~~-W~~~a~-M~~~R~~~~v~~l~g~iYavGG~dg~~~l~svE~YDp~~~ 406 (571)
T KOG4441|consen 334 KLYVVGGYDSGSDRLSSVERYDPRTNQ-WTPVAP-MNTKRSDFGVAVLDGKLYAVGGFDGEKSLNSVECYDPVTN 406 (571)
T ss_pred EEEEEccccCCCcccceEEEecCCCCc-eeccCC-ccCccccceeEEECCEEEEEeccccccccccEEEecCCCC
Confidence 356788888 246667776544 222211 1111111111 22688888888875 3667776544
No 446
>PRK10526 acyl-CoA thioesterase II; Provisional
Probab=50.76 E-value=43 Score=18.60 Aligned_cols=56 Identities=13% Similarity=0.195 Sum_probs=32.5
Q ss_pred eEEeeCCCcEEEeeCCCceeeeeee--c----cCCCcEEEEEecCCCCEEEEEcCCCeEEEE
Q psy7058 4 LATTSADQTARIWNTEDFSLVRELG--T----ANQRWVWDAAFTLDSKFLLTASSDGVARLW 59 (85)
Q Consensus 4 l~~~~~~~~i~~~d~~~~~~~~~~~--~----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 59 (85)
+..++.|..|.+.+.........+. . ........--|+.+|.+++++..++.++..
T Consensus 224 ~~~aSLdhsi~Fh~~~~~d~W~L~~~~s~~a~~gr~~~~g~i~~~~G~LvAs~~Qegl~r~~ 285 (286)
T PRK10526 224 MQIATIDHSMWFHRPFNLNEWLLYSVESTSASSARGFVRGEFYTQDGVLVASTVQEGVMRNH 285 (286)
T ss_pred ceEEeeeEeEEEeCCCCCCceEEEEEECCcccCCceEEEEEEECCCCCEEEEEEeeEEEEec
Confidence 3456777777766533222111111 1 122334556688899999999988888753
No 447
>KOG2727|consensus
Probab=49.29 E-value=35 Score=22.90 Aligned_cols=36 Identities=11% Similarity=0.110 Sum_probs=24.9
Q ss_pred EEEEEcCCCeEEEEEcCCccccccccccccceeEEEE
Q psy7058 46 FLLTASSDGVARLWNIETGEVDKEYSGHQKAITSLAF 82 (85)
Q Consensus 46 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~~ 82 (85)
.++.|..+|.+++|.... ..+..--.|.++|..+++
T Consensus 102 cVavGt~sGyV~FYTe~G-vllf~Q~~~edPVl~lk~ 137 (1244)
T KOG2727|consen 102 CVAVGTSSGYVLFYTETG-VLLFKQIVHEDPVLKLKV 137 (1244)
T ss_pred EEEEecccceEEEEeccc-HHHHHHHhccCccceEEE
Confidence 388899999999998754 333333347778777665
No 448
>PF09826 Beta_propel: Beta propeller domain; InterPro: IPR019198 This entry consists of predicted secreted proteins containing a C-terminal beta-propeller domain distantly related to WD-40 repeats.
Probab=45.96 E-value=71 Score=19.72 Aligned_cols=54 Identities=17% Similarity=0.242 Sum_probs=39.9
Q ss_pred CcEEEeeCCCceeeeeeec-cCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCcc
Q psy7058 11 QTARIWNTEDFSLVRELGT-ANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGE 65 (85)
Q Consensus 11 ~~i~~~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 65 (85)
..|++.| .+.+.+.++.. +....|.+++|-.+.-+++|--.--.+.+.|+.+.+
T Consensus 304 N~lyVLD-~~L~~vG~l~~la~gE~IysvRF~Gd~~Y~VTFrqvDPLfviDLsdP~ 358 (521)
T PF09826_consen 304 NNLYVLD-EDLKIVGSLEGLAPGERIYSVRFMGDRAYLVTFRQVDPLFVIDLSDPA 358 (521)
T ss_pred EEEEEEC-CCCcEeEEccccCCCceEEEEEEeCCeEEEEEEeecCceEEEECCCCC
Confidence 4577777 66677766654 345679999998888888888776678888987654
No 449
>cd01272 FE65_N Fe65 Phosphotyrosine-binding (PTB) domain. Fe65 Phosphotyrosine-binding (PTB) domain. Fe65 is an amyloid beta A4 precursor protein-binding. It contains an N-terminal WW domain followed by two PTB domains. PTB domains have a PH-like fold and are found in various eukaryotic signaling molecules. They were initially identified based upon their ability to recognize phosphorylated tyrosine residues. In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. More recent studies have found that some types of PTB domains can bind to peptides which are not tyrosine phosphorylated or lack tyrosine residues altogether.
Probab=45.22 E-value=40 Score=16.66 Aligned_cols=25 Identities=28% Similarity=0.255 Sum_probs=13.0
Q ss_pred CCCEEEEEcCCCeEEEEEcCCcccc
Q psy7058 43 DSKFLLTASSDGVARLWNIETGEVD 67 (85)
Q Consensus 43 ~~~~~~~~~~~~~i~~~~~~~~~~~ 67 (85)
+|+-++..-+++.+++.|..+...+
T Consensus 51 eGk~~~m~L~~g~lkLiDP~~~s~L 75 (138)
T cd01272 51 DGKDLFMDLDEGALKLIDPENLTVL 75 (138)
T ss_pred CcceeEEEecCCceEeeCCCCCceE
Confidence 3444444445566666665554433
No 450
>PF09631 Sen15: Sen15 protein; InterPro: IPR018593 The Sen15 subunit of the tRNA intron-splicing endonuclease is one of the two structural subunits of this heterotetrameric enzyme. Residues 36-157 of this subunit possess a novel homodimeric fold. Each monomer consists of three alpha-helices and a mixed antiparallel/parallel beta-sheet. Two monomers of Sen15 fold with two monomers of Sen34, one of the two catalytic subunits, to form an alpha2-beta2 tetramer as part of the functional endonuclease assembly []. ; PDB: 2GW6_B.
Probab=44.47 E-value=34 Score=15.66 Aligned_cols=19 Identities=21% Similarity=0.413 Sum_probs=12.3
Q ss_pred EEEEEcCCCeEEEEEcCCc
Q psy7058 46 FLLTASSDGVARLWNIETG 64 (85)
Q Consensus 46 ~~~~~~~~~~i~~~~~~~~ 64 (85)
.+|....|++|-.|.+.+|
T Consensus 76 ~LAiv~~DsTiVYY~i~~G 94 (101)
T PF09631_consen 76 LLAIVDDDSTIVYYKIHDG 94 (101)
T ss_dssp EEEEE-TTS-EEEEEEE--
T ss_pred EEEEEcCCCCEEEEEEeCC
Confidence 4677889999999888665
No 451
>PF08954 DUF1900: Domain of unknown function (DUF1900); InterPro: IPR015049 This domain is predominantly found in the structural protein coronin, and is duplicated in some sequences. It has no known function []. ; PDB: 2B4E_A 2AQ5_A.
Probab=44.24 E-value=41 Score=16.55 Aligned_cols=30 Identities=20% Similarity=0.391 Sum_probs=14.4
Q ss_pred EEEEEecCCCCEEE-EEcCCCeEEEEEcCCc
Q psy7058 35 VWDAAFTLDSKFLL-TASSDGVARLWNIETG 64 (85)
Q Consensus 35 ~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~ 64 (85)
+.---+.+|...+. +|-.|+.|+.|.+...
T Consensus 13 ~L~P~yD~dt~llyl~gKGD~~ir~yEv~~~ 43 (136)
T PF08954_consen 13 VLMPFYDEDTNLLYLAGKGDGNIRYYEVSDE 43 (136)
T ss_dssp -EEEEE-TTT-EEEEEETT-S-EEEEEE-SS
T ss_pred eeEeeEcCCCCEEEEEeccCcEEEEEEEcCC
Confidence 44444566555544 4445778888887655
No 452
>KOG2109|consensus
Probab=43.69 E-value=61 Score=20.91 Aligned_cols=46 Identities=17% Similarity=0.328 Sum_probs=32.3
Q ss_pred EeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCC-eEEEEEc
Q psy7058 15 IWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDG-VARLWNI 61 (85)
Q Consensus 15 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~ 61 (85)
+=|..+......++. +..++..++|.+.+..+++....| .|.++.+
T Consensus 299 vkdf~S~a~i~QfkA-hkspiSaLcfdqsgsllViasi~g~nVnvfRi 345 (788)
T KOG2109|consen 299 VKDFDSFADIRQFKA-HKSPISALCFDQSGSLLVIASITGRNVNVFRI 345 (788)
T ss_pred eecccchhhhhheee-ecCcccccccccCceEEEEEeeccceeeeEEe
Confidence 334445555566666 788899999999999988877654 4666554
No 453
>KOG0080|consensus
Probab=43.56 E-value=35 Score=17.70 Aligned_cols=14 Identities=7% Similarity=0.494 Sum_probs=9.1
Q ss_pred cCCCeEEEEEcCCc
Q psy7058 51 SSDGVARLWNIETG 64 (85)
Q Consensus 51 ~~~~~i~~~~~~~~ 64 (85)
+..|.|.+||+...
T Consensus 83 gaqGiIlVYDVT~R 96 (209)
T KOG0080|consen 83 GAQGIILVYDVTSR 96 (209)
T ss_pred cCceeEEEEEccch
Confidence 35667778887543
No 454
>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit. CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....
Probab=43.17 E-value=60 Score=18.10 Aligned_cols=52 Identities=6% Similarity=0.142 Sum_probs=32.4
Q ss_pred CCCcEEEeeCCCce-eeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcC
Q psy7058 9 ADQTARIWNTEDFS-LVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIE 62 (85)
Q Consensus 9 ~~~~i~~~d~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 62 (85)
.++.+.+|++...+ ....-.......+.++.. .+.+++.++.-..+.++...
T Consensus 105 ~g~~l~v~~l~~~~~l~~~~~~~~~~~i~sl~~--~~~~I~vgD~~~sv~~~~~~ 157 (321)
T PF03178_consen 105 VGNKLYVYDLDNSKTLLKKAFYDSPFYITSLSV--FKNYILVGDAMKSVSLLRYD 157 (321)
T ss_dssp ETTEEEEEEEETTSSEEEEEEE-BSSSEEEEEE--ETTEEEEEESSSSEEEEEEE
T ss_pred ecCEEEEEEccCcccchhhheecceEEEEEEec--cccEEEEEEcccCEEEEEEE
Confidence 35788899887666 333222212335666655 36688888887777777554
No 455
>PF10411 DsbC_N: Disulfide bond isomerase protein N-terminus; InterPro: IPR018950 This is the N-terminal domain of the disulphide bond isomerase DsbC. The whole molecule is V-shaped, where each arm is a DsbC monomer of two domains linked by a hinge; and the N-termini of each monomer join to form the dimer interface at the base of the V, so are vital for dimerisation []. DsbC is required for disulphide bond formation and functions as a disulphide bond isomerase during oxidative protein-folding in bacterial periplasm. It also has chaperone activity []. ; PDB: 1EEJ_B 2IYJ_A 1TJD_A 1JZD_B 1JZO_A 1G0T_B 1T3B_A.
Probab=42.77 E-value=27 Score=14.07 Aligned_cols=10 Identities=20% Similarity=0.581 Sum_probs=4.5
Q ss_pred cCCCCEEEEE
Q psy7058 41 TLDSKFLLTA 50 (85)
Q Consensus 41 ~~~~~~~~~~ 50 (85)
+++|++++.|
T Consensus 39 ~~dg~yli~G 48 (57)
T PF10411_consen 39 DEDGRYLIQG 48 (57)
T ss_dssp ETTSSEEEES
T ss_pred cCCCCEEEEe
Confidence 3444444443
No 456
>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs. It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].
Probab=42.32 E-value=95 Score=20.18 Aligned_cols=22 Identities=18% Similarity=0.219 Sum_probs=18.0
Q ss_pred cEEEEEecCCCCEEEEEcCCCe
Q psy7058 34 WVWDAAFTLDSKFLLTASSDGV 55 (85)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~ 55 (85)
.|..+.++++|++++..+..+.
T Consensus 86 ~v~~i~~n~~g~~lal~G~~~v 107 (717)
T PF10168_consen 86 EVHQISLNPTGSLLALVGPRGV 107 (717)
T ss_pred eEEEEEECCCCCEEEEEcCCcE
Confidence 4778899999999988877654
No 457
>KOG1916|consensus
Probab=42.06 E-value=1.1e+02 Score=20.90 Aligned_cols=21 Identities=10% Similarity=0.211 Sum_probs=13.4
Q ss_pred EEEEc-CCCeEEEEEcCCcccc
Q psy7058 47 LLTAS-SDGVARLWNIETGEVD 67 (85)
Q Consensus 47 ~~~~~-~~~~i~~~~~~~~~~~ 67 (85)
++++. .+..+.+|.....+++
T Consensus 307 ~Itttd~nre~k~w~~a~w~Cl 328 (1283)
T KOG1916|consen 307 RITTTDVNREEKFWAEAPWQCL 328 (1283)
T ss_pred EEecccCCcceeEeeccchhhh
Confidence 34443 4567889987766665
No 458
>KOG1898|consensus
Probab=41.73 E-value=1.2e+02 Score=21.04 Aligned_cols=50 Identities=6% Similarity=0.034 Sum_probs=27.1
Q ss_pred EeeCCCcEEEeeCCCceeeeeeeccC-CCcEEEEEecCCCCEEEEEcCCCeEE
Q psy7058 6 TTSADQTARIWNTEDFSLVRELGTAN-QRWVWDAAFTLDSKFLLTASSDGVAR 57 (85)
Q Consensus 6 ~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~ 57 (85)
-++....+++||+...++.++...+. ...|..+++ .+..++.|+..-.+.
T Consensus 949 LagvG~~l~~YdlG~K~lLRk~e~k~~p~~Is~iqt--~~~RI~VgD~qeSV~ 999 (1205)
T KOG1898|consen 949 LAGVGRFLRLYDLGKKKLLRKCELKFIPNRISSIQT--YGARIVVGDIQESVH 999 (1205)
T ss_pred EEecccEEEEeeCChHHHHhhhhhccCceEEEEEee--cceEEEEeeccceEE
Confidence 34456789999998776655544322 334555544 344444444333333
No 459
>COG1946 TesB Acyl-CoA thioesterase [Lipid metabolism]
Probab=41.69 E-value=34 Score=19.28 Aligned_cols=25 Identities=20% Similarity=0.408 Sum_probs=17.6
Q ss_pred EEEEEecCCCCEEEEEcCCCeEEEE
Q psy7058 35 VWDAAFTLDSKFLLTASSDGVARLW 59 (85)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~i~~~ 59 (85)
+..--|+.+|.++++....|.++..
T Consensus 261 ~~G~lf~r~G~LiA~~~QEG~~r~~ 285 (289)
T COG1946 261 VRGQLFDRDGQLIASVVQEGLIRYH 285 (289)
T ss_pred eeeEEEcCCCCEEEEEeeeEEEecc
Confidence 4445567788888888887777653
No 460
>KOG4460|consensus
Probab=40.94 E-value=93 Score=19.69 Aligned_cols=25 Identities=8% Similarity=0.145 Sum_probs=19.6
Q ss_pred EEEEEecCCCCEEEEEcCCCeEEEE
Q psy7058 35 VWDAAFTLDSKFLLTASSDGVARLW 59 (85)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~i~~~ 59 (85)
+..+..++.|+.++..+.+|.+-++
T Consensus 106 V~~vl~s~~GS~VaL~G~~Gi~vMe 130 (741)
T KOG4460|consen 106 VYQVLLSPTGSHVALIGIKGLMVME 130 (741)
T ss_pred EEEEEecCCCceEEEecCCeeEEEE
Confidence 5667889999999988888865544
No 461
>KOG2280|consensus
Probab=40.76 E-value=1.1e+02 Score=20.27 Aligned_cols=39 Identities=15% Similarity=0.225 Sum_probs=30.7
Q ss_pred CcEEEEEecCCCCEEEEEcCCCeEEEEEcCCcccccccc
Q psy7058 33 RWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYS 71 (85)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 71 (85)
..+..+.++|.+.+++.-...|.+.+-++...+.+..+.
T Consensus 217 ~~~~ki~VS~n~~~laLyt~~G~i~~vs~D~~~~lce~~ 255 (829)
T KOG2280|consen 217 SSVVKISVSPNRRFLALYTETGKIWVVSIDLSQILCEFN 255 (829)
T ss_pred ceEEEEEEcCCcceEEEEecCCcEEEEecchhhhhhccC
Confidence 447778899999999999999999988887666555544
No 462
>PF15644 Tox-PL: Papain fold toxin 1; PDB: 3B21_A.
Probab=40.33 E-value=42 Score=15.56 Aligned_cols=22 Identities=9% Similarity=0.231 Sum_probs=16.0
Q ss_pred CCEEEEEcCCCeEEEEEcCCcc
Q psy7058 44 SKFLLTASSDGVARLWNIETGE 65 (85)
Q Consensus 44 ~~~~~~~~~~~~i~~~~~~~~~ 65 (85)
++.+.....+|.|.++|.+.++
T Consensus 88 gHa~nvv~~~G~i~~~D~Q~G~ 109 (111)
T PF15644_consen 88 GHAFNVVNQNGKIVFLDPQSGK 109 (111)
T ss_dssp TTEEEEEEE-SSEEEEBTTTTB
T ss_pred ceEEEEEeCCCeEEEEeCCCCC
Confidence 6666666788899999988765
No 463
>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2.3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.
Probab=39.94 E-value=69 Score=17.90 Aligned_cols=68 Identities=12% Similarity=0.067 Sum_probs=37.8
Q ss_pred eeEEeeCCC--cEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCcccccccc
Q psy7058 3 LLATTSADQ--TARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYS 71 (85)
Q Consensus 3 ~l~~~~~~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 71 (85)
++-+.+.-| .|+.+|..+++..........---..+....+ ......=.++...+||..+.+.+.++.
T Consensus 58 LyESTG~yG~S~l~~~d~~tg~~~~~~~l~~~~FgEGit~~~d-~l~qLTWk~~~~f~yd~~tl~~~~~~~ 127 (264)
T PF05096_consen 58 LYESTGLYGQSSLRKVDLETGKVLQSVPLPPRYFGEGITILGD-KLYQLTWKEGTGFVYDPNTLKKIGTFP 127 (264)
T ss_dssp EEEEECSTTEEEEEEEETTTSSEEEEEE-TTT--EEEEEEETT-EEEEEESSSSEEEEEETTTTEEEEEEE
T ss_pred EEEeCCCCCcEEEEEEECCCCcEEEEEECCccccceeEEEECC-EEEEEEecCCeEEEEccccceEEEEEe
Confidence 344555544 58888999888776655422222233443322 222223367788888887776665554
No 464
>PF02870 Methyltransf_1N: 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain; InterPro: IPR008332 Synonym(s): 6-O-methylguanine-DNA methyltransferase, O-6-methylguanine-DNA-alkyltransferase The repair of DNA containing O6-alkylated guanine is carried out by DNA-[protein]-cysteine S-methyltransferase (2.1.1.63 from EC). The major mutagenic and carcinogenic effect of methylating agents in DNA is the formation of O6-alkylguanine. The alkyl group at the O-6 position is transferred to a cysteine residue in the enzyme []. This is a suicide reaction since the enzyme is irreversibly inactivated and the methylated protein accumulates as a dead-end product. Most, but not all of the methyltransferases are also able to repair O-4-methylthymine. DNA-[protein]-cysteine S-methyltransferases are widely distributed and are found in various prokaryotic and eukaryotic sources []. This group of proteins are characterised by having an N-terminal ribonuclease-like domain associated with 6-O-methylguanine DNA methyltransferase activity (IPR001497 from INTERPRO).; GO: 0003908 methylated-DNA-[protein]-cysteine S-methyltransferase activity, 0006281 DNA repair; PDB: 1SFE_A 1T39_B 1T38_A 1EH7_A 1EH6_A 1YFH_C 1EH8_A 1QNT_A.
Probab=38.09 E-value=38 Score=14.32 Aligned_cols=23 Identities=22% Similarity=0.130 Sum_probs=17.2
Q ss_pred ecCCCCEEEEEcCCCeEEEEEcC
Q psy7058 40 FTLDSKFLLTASSDGVARLWNIE 62 (85)
Q Consensus 40 ~~~~~~~~~~~~~~~~i~~~~~~ 62 (85)
-+|-|..++.++..|...++-..
T Consensus 8 ~sPlG~l~l~a~e~gL~~i~f~~ 30 (77)
T PF02870_consen 8 DSPLGPLLLAASEKGLCGIDFED 30 (77)
T ss_dssp EETTEEEEEEEETTCEEEEEEEC
T ss_pred cCCCeEEEEEEECCeEEEEEECC
Confidence 36778888888888877766543
No 465
>TIGR02608 delta_60_rpt delta-60 repeat domain. This domain occurs in tandem repeats, as many as 13, in proteins from Bdellovibrio bacteriovorus, Azotobacter vinelandii, Geobacter sulfurreducens, Pirellula sp. 1, Myxococcus xanthus, and others, many of which are Deltaproteobacteria. The periodicity of the repeat ranges from about 57 to 61 amino acids, and a core region of about 54 is represented by this model and seed alignment.
Probab=37.72 E-value=35 Score=13.87 Aligned_cols=17 Identities=24% Similarity=0.368 Sum_probs=12.6
Q ss_pred EEEEEecCCCCEEEEEc
Q psy7058 35 VWDAAFTLDSKFLLTAS 51 (85)
Q Consensus 35 ~~~~~~~~~~~~~~~~~ 51 (85)
...+.+.|||++++.+.
T Consensus 3 ~~~~~~q~DGkIlv~G~ 19 (55)
T TIGR02608 3 AYAVAVQSDGKILVAGY 19 (55)
T ss_pred eEEEEECCCCcEEEEEE
Confidence 45677778888888774
No 466
>cd03444 Thioesterase_II_repeat1 Thioesterase II (TEII) is thought to regenerate misprimed nonribosomal peptide synthetases (NRPSs) as well as modular polyketide synthases (PKSs) by hydrolyzing acetyl groups bound to the peptidyl carrier protein (PCP) and acyl carrier protein (ACP) domains, respectively. TEII has two tandem asymmetric hot dog folds that are structurally similar to one found in PaaI thioesterase, 4-hydroxybenzoyl-CoA thioesterase (4HBT) and beta-hydroxydecanoyl-ACP dehydratase and thus, the TEII monomer is equivalent to the homodimeric form of the latter three enzymes. Human TEII is expressed in T cells and has been shown to bind the product of the HIV-1 Nef gene.
Probab=37.45 E-value=47 Score=15.19 Aligned_cols=50 Identities=18% Similarity=0.162 Sum_probs=25.8
Q ss_pred EEeeCCCcEEEeeCCCceeee--eeec----cCCCcEEEEEecCCCCEEEEEcCCC
Q psy7058 5 ATTSADQTARIWNTEDFSLVR--ELGT----ANQRWVWDAAFTLDSKFLLTASSDG 54 (85)
Q Consensus 5 ~~~~~~~~i~~~d~~~~~~~~--~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 54 (85)
..++.|..|...+........ .... ........--|+++|..+++..+++
T Consensus 47 ~~aSldhsi~Fh~~~~~~~W~l~~~~~~~~~~gr~~~~~~l~~~~G~LvAs~~Q~~ 102 (104)
T cd03444 47 ASASLDHAIWFHRPFRADDWLLYEQRSPRAGNGRGLVEGRIFTRDGELVASVAQEG 102 (104)
T ss_pred ceEeeeEEEEEeCCCCCCceEEEEEECccccCCeeEEEEEEECCCCCEEEEEEEee
Confidence 456667777766643321111 1111 1122344556777888887776554
No 467
>PF06739 SBBP: Beta-propeller repeat; InterPro: IPR010620 This family is related to IPR001680 from INTERPRO and is likely to also form a beta-propeller. SBBP stands for Seven Bladed Beta Propeller.
Probab=37.16 E-value=29 Score=12.69 Aligned_cols=22 Identities=14% Similarity=0.217 Sum_probs=16.8
Q ss_pred CcEEEEEecCCCCEEEEEcCCC
Q psy7058 33 RWVWDAAFTLDSKFLLTASSDG 54 (85)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~ 54 (85)
.....+.+.++|...++|..++
T Consensus 13 ~~~~~IavD~~GNiYv~G~T~~ 34 (38)
T PF06739_consen 13 DYGNGIAVDSNGNIYVTGYTNG 34 (38)
T ss_pred eeEEEEEECCCCCEEEEEeecC
Confidence 3467888888998888876654
No 468
>TIGR03606 non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH family. PQQ, or pyrroloquinoline-quinone, serves as a cofactor for a number of sugar and alcohol dehydrogenases in a limited number of bacterial species. Most characterized PQQ-dependent enzymes have multiple repeats of a sequence region described by pfam01011 (PQQ enzyme repeat), but this protein family in unusual in lacking that repeat. Below the noise cutoff are related proteins mostly from species that lack PQQ biosynthesis.
Probab=36.64 E-value=1e+02 Score=18.82 Aligned_cols=76 Identities=11% Similarity=0.098 Sum_probs=41.5
Q ss_pred ceeEEeeCCCcEEEeeCCCce--ee---eeeeccCCCcEEEEEecCCC-CEEEEEcCCCeEEEEEcCCcccccccccccc
Q psy7058 2 GLLATTSADQTARIWNTEDFS--LV---RELGTANQRWVWDAAFTLDS-KFLLTASSDGVARLWNIETGEVDKEYSGHQK 75 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~--~~---~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 75 (85)
++|+.+-..+.|....+.... .. ..+.. ....+..+...||| .+.+..+.++.+.= .++.+..+++ ...
T Consensus 370 ~llv~~L~~~~l~r~~l~~~~~~v~~~~~~~~~-~~~RiRdv~~~pDg~~iy~~td~~g~~~~---~~~~~~~~~~-~~~ 444 (454)
T TIGR03606 370 SLLIPSLKRGVIYRIKLDPDYSTVYGDAVPMFK-TNNRYRDVIASPDGNVLYVATDNFGNVQK---DDGSVTNTLE-NPG 444 (454)
T ss_pred CEEEEEcCCCeEEEEEecCCcceecceeEEeec-CCCeeEEEEECCCCCEEEEEEcCCCcccc---CCCCceeEec-CCC
Confidence 556666677777766665331 21 22222 24579999999997 55555555665432 2333344443 445
Q ss_pred ceeEEEE
Q psy7058 76 AITSLAF 82 (85)
Q Consensus 76 ~v~~~~~ 82 (85)
.|..+.+
T Consensus 445 ~~~~~~~ 451 (454)
T TIGR03606 445 SIIVFTY 451 (454)
T ss_pred eEEEEEe
Confidence 5554444
No 469
>COG5276 Uncharacterized conserved protein [Function unknown]
Probab=36.50 E-value=89 Score=18.15 Aligned_cols=61 Identities=8% Similarity=0.072 Sum_probs=37.9
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeecc-CCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCc
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTA-NQRWVWDAAFTLDSKFLLTASSDGVARLWNIETG 64 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 64 (85)
+++..+..+.-+++.|+.+...+..+..- ..+...++.+ .|++......+.-+.+.|+.+.
T Consensus 97 ~yvyvad~ssGL~IvDIS~P~sP~~~~~lnt~gyaygv~v--sGn~aYVadlddgfLivdvsdp 158 (370)
T COG5276 97 EYVYVADWSSGLRIVDISTPDSPTLIGFLNTDGYAYGVYV--SGNYAYVADLDDGFLIVDVSDP 158 (370)
T ss_pred cEEEEEcCCCceEEEeccCCCCcceeccccCCceEEEEEe--cCCEEEEeeccCcEEEEECCCC
Confidence 44555666677888998877665554431 1133344444 5888877776666667787654
No 470
>PHA03098 kelch-like protein; Provisional
Probab=36.41 E-value=1e+02 Score=18.75 Aligned_cols=23 Identities=9% Similarity=0.254 Sum_probs=15.2
Q ss_pred CCCEEEEEcCC-----CeEEEEEcCCcc
Q psy7058 43 DSKFLLTASSD-----GVARLWNIETGE 65 (85)
Q Consensus 43 ~~~~~~~~~~~-----~~i~~~~~~~~~ 65 (85)
++..++.|+.+ ..+..||..+.+
T Consensus 487 ~~~iyv~GG~~~~~~~~~v~~yd~~~~~ 514 (534)
T PHA03098 487 NNKIYVVGGDKYEYYINEIEVYDDKTNT 514 (534)
T ss_pred CCEEEEEcCCcCCcccceeEEEeCCCCE
Confidence 56666676653 467888876553
No 471
>PF03022 MRJP: Major royal jelly protein; InterPro: IPR003534 The major royal jelly proteins (MRJPs) comprise 12.5% of the mass, and 82-90% of the protein content [], of honeybee (Apis mellifera) royal jelly. Royal jelly is a substance secreted by the cephalic glands of nurse bees [] and it is used to trigger development of a queen bee from a bee larva. The biological function of the MRJPs is unknown, but they are believed to play a major role in nutrition due to their high essential amino acid content []. Two royal jelly proteins, MRJP3 and MRJP5, contain a tandem repeat that results from a high genetic variablility. This polymorphism may be useful for genotyping individual bees [].; PDB: 3Q6P_B 3Q6K_A 3Q6T_A 2QE8_B.
Probab=35.60 E-value=83 Score=17.57 Aligned_cols=57 Identities=12% Similarity=0.169 Sum_probs=36.8
Q ss_pred CcEEEeeCCCceeeeeeecc-----CCCcEEEEEecCCC-----CEEEEE-cCCCeEEEEEcCCcccc
Q psy7058 11 QTARIWNTEDFSLVRELGTA-----NQRWVWDAAFTLDS-----KFLLTA-SSDGVARLWNIETGEVD 67 (85)
Q Consensus 11 ~~i~~~d~~~~~~~~~~~~~-----~~~~~~~~~~~~~~-----~~~~~~-~~~~~i~~~~~~~~~~~ 67 (85)
.+|..||+.+.+.++++.-. ....++.+.+.... .++... .....|-++|+.+++.-
T Consensus 34 pKLv~~Dl~t~~li~~~~~p~~~~~~~s~lndl~VD~~~~~~~~~~aYItD~~~~glIV~dl~~~~s~ 101 (287)
T PF03022_consen 34 PKLVAFDLKTNQLIRRYPFPPDIAPPDSFLNDLVVDVRDGNCDDGFAYITDSGGPGLIVYDLATGKSW 101 (287)
T ss_dssp -EEEEEETTTTCEEEEEE--CCCS-TCGGEEEEEEECTTTTS-SEEEEEEETTTCEEEEEETTTTEEE
T ss_pred cEEEEEECCCCcEEEEEECChHHcccccccceEEEEccCCCCcceEEEEeCCCcCcEEEEEccCCcEE
Confidence 47889999999887776542 24567888776622 233333 33458999999887543
No 472
>KOG0394|consensus
Probab=34.98 E-value=44 Score=17.75 Aligned_cols=16 Identities=6% Similarity=0.287 Sum_probs=10.9
Q ss_pred EcCCCeEEEEEcCCcc
Q psy7058 50 ASSDGVARLWNIETGE 65 (85)
Q Consensus 50 ~~~~~~i~~~~~~~~~ 65 (85)
-+.|..+.+||+...+
T Consensus 80 RgaDcCvlvydv~~~~ 95 (210)
T KOG0394|consen 80 RGADCCVLVYDVNNPK 95 (210)
T ss_pred cCCceEEEEeecCChh
Confidence 3567777888876554
No 473
>PF05787 DUF839: Bacterial protein of unknown function (DUF839); InterPro: IPR008557 This family consists of bacterial proteins of unknown function.
Probab=33.80 E-value=1.2e+02 Score=18.86 Aligned_cols=20 Identities=20% Similarity=0.277 Sum_probs=14.5
Q ss_pred cCCCcEEEEEecCCCCEEEE
Q psy7058 30 ANQRWVWDAAFTLDSKFLLT 49 (85)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~ 49 (85)
.....+..++|+||++.++.
T Consensus 499 P~gaE~tG~~fspDg~tlFv 518 (524)
T PF05787_consen 499 PNGAEITGPCFSPDGRTLFV 518 (524)
T ss_pred CCCcccccceECCCCCEEEE
Confidence 34566888888888877654
No 474
>COG3823 Glutamine cyclotransferase [Posttranslational modification, protein turnover, chaperones]
Probab=33.52 E-value=87 Score=17.19 Aligned_cols=19 Identities=5% Similarity=-0.139 Sum_probs=14.4
Q ss_pred CcEEEeeCCCceeeeeeec
Q psy7058 11 QTARIWNTEDFSLVRELGT 29 (85)
Q Consensus 11 ~~i~~~d~~~~~~~~~~~~ 29 (85)
..|++||+.+++...+...
T Consensus 68 S~ir~~~L~~gq~~~s~~l 86 (262)
T COG3823 68 SKIRVSDLTTGQEIFSEKL 86 (262)
T ss_pred ceeEEEeccCceEEEEeec
Confidence 3588999998887766554
No 475
>KOG2103|consensus
Probab=31.80 E-value=1.6e+02 Score=19.75 Aligned_cols=63 Identities=16% Similarity=0.091 Sum_probs=30.6
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcC-CCeEEEEEcCCccccccc
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASS-DGVARLWNIETGEVDKEY 70 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~ 70 (85)
++|+.+...+.+--.++++|+..-+...+.......+. ..-+.+. ...++.|+.+.|.....+
T Consensus 48 ~rlivsT~~~vlAsL~~~tGei~WRqvl~~~~~~~~~~------~~~~iS~dg~~lr~wn~~~g~l~~~i 111 (910)
T KOG2103|consen 48 KRLIVSTEKGVLASLNLRTGEIIWRQVLEPKTSGLGVP------LTNTISVDGRYLRSWNTNNGILDWEI 111 (910)
T ss_pred ceEEEEeccchhheecccCCcEEEEEeccCCCcccCcc------eeEEEccCCcEEEeecCCCceeeeec
Confidence 34566666666666677777665433221111010111 1112333 346888888777544333
No 476
>COG4993 Gcd Glucose dehydrogenase [Carbohydrate transport and metabolism]
Probab=31.36 E-value=1.5e+02 Score=19.29 Aligned_cols=65 Identities=8% Similarity=0.005 Sum_probs=37.4
Q ss_pred eEEeeCCCcEEEeeCCCceeeeeeeccCCC-----cE-EEEEec--------CCCCEEEEEcCCCeEEEEEcCCccccc
Q psy7058 4 LATTSADQTARIWNTEDFSLVRELGTANQR-----WV-WDAAFT--------LDSKFLLTASSDGVARLWNIETGEVDK 68 (85)
Q Consensus 4 l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-----~~-~~~~~~--------~~~~~~~~~~~~~~i~~~~~~~~~~~~ 68 (85)
.+.+-..|.+.-.|+++++...+.+..... ++ ..+.+- -.+-.+..+..|..++.+|...++.+.
T Consensus 646 pcqap~wGyv~a~DlkTgk~~wk~~~gt~~d~~p~plp~~~g~pt~Ggp~~t~Ggv~f~a~~~dqYLrayd~~~G~~lW 724 (773)
T COG4993 646 PCQAPPWGYVKAIDLKTGKELWKHRNGTVYDMTPVPLPFKVGFPTLGGPIGTAGGVAFIAATGDQYLRAYDGTGGKQLW 724 (773)
T ss_pred ccccCCcceeeeeeccccceeeeccCCccccCcccCcccccccccCCCccccccceEEEecchheeeeeeeccCCceee
Confidence 345556778888899988887764321100 00 001110 023345566678899999998886553
No 477
>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=31.17 E-value=1.1e+02 Score=17.65 Aligned_cols=61 Identities=13% Similarity=0.160 Sum_probs=34.7
Q ss_pred eEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCc
Q psy7058 4 LATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETG 64 (85)
Q Consensus 4 l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 64 (85)
|.+..+.+...++=...|+.++++.-..-.....+.+..++.+.++--.+..+.++.+...
T Consensus 100 LFav~n~p~~iVElt~~GdlirtiPL~g~~DpE~Ieyig~n~fvi~dER~~~l~~~~vd~~ 160 (316)
T COG3204 100 LFAVTNKPAAIVELTKEGDLIRTIPLTGFSDPETIEYIGGNQFVIVDERDRALYLFTVDAD 160 (316)
T ss_pred EEEecCCCceEEEEecCCceEEEecccccCChhHeEEecCCEEEEEehhcceEEEEEEcCC
Confidence 3444444444444445566666655422223445666667777777667777877776543
No 478
>PF15527 Toxin_47: Putative toxin 47
Probab=30.76 E-value=70 Score=15.23 Aligned_cols=10 Identities=40% Similarity=0.816 Sum_probs=4.1
Q ss_pred cCCCeEEEEE
Q psy7058 51 SSDGVARLWN 60 (85)
Q Consensus 51 ~~~~~i~~~~ 60 (85)
+..+.+.+||
T Consensus 16 ~~s~~vNLyD 25 (129)
T PF15527_consen 16 SASGVVNLYD 25 (129)
T ss_pred ccceEEEEec
Confidence 3333444444
No 479
>KOG2714|consensus
Probab=30.53 E-value=1.3e+02 Score=18.42 Aligned_cols=61 Identities=7% Similarity=0.061 Sum_probs=31.3
Q ss_pred EEeeCCCcEEEeeCCCceeeeeeecc---CCCcEEEEEecCCCCEEEE-E------cCCCeEEEEEcCCcc
Q psy7058 5 ATTSADQTARIWNTEDFSLVRELGTA---NQRWVWDAAFTLDSKFLLT-A------SSDGVARLWNIETGE 65 (85)
Q Consensus 5 ~~~~~~~~i~~~d~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~-~------~~~~~i~~~~~~~~~ 65 (85)
...+..+.|-+|+..+.+..-..... .......+.|.+...+++. . ..++.|++||.++.+
T Consensus 239 ~~~s~~~~Igvw~~~t~q~~d~~~~s~~dsag~~~kL~w~ng~~~li~~~~fp~~~kdN~~i~~~d~Rd~n 309 (465)
T KOG2714|consen 239 VALSSVGKIGVWHAVTQQAQDVQPISSYDSAGSFLKLGWLNGSNLLIDSQKFPLRMKDNDLIVTEDFRDRN 309 (465)
T ss_pred hhccccccccccchhhhceeeeeeccCccccCChhhhccccCceeEEEEeeccccccCCceEEEeeccCCC
Confidence 34455667888888776433322221 1112233445443322221 1 346788999987655
No 480
>COG0554 GlpK Glycerol kinase [Energy production and conversion]
Probab=30.36 E-value=65 Score=19.81 Aligned_cols=22 Identities=18% Similarity=0.359 Sum_probs=16.7
Q ss_pred EEeeCCCcEEEeeCCCceeeee
Q psy7058 5 ATTSADQTARIWNTEDFSLVRE 26 (85)
Q Consensus 5 ~~~~~~~~i~~~d~~~~~~~~~ 26 (85)
....+..++.+||-.+|+++..
T Consensus 79 GITNQRETtvvWdk~tG~Pi~n 100 (499)
T COG0554 79 GITNQRETTVVWDKETGKPIYN 100 (499)
T ss_pred EeeccceeEEEEeCCCCCCccc
Confidence 4455677899999999887653
No 481
>PRK03298 hypothetical protein; Provisional
Probab=30.32 E-value=1e+02 Score=16.87 Aligned_cols=26 Identities=19% Similarity=0.405 Sum_probs=15.4
Q ss_pred EEecCCCCEEEEEcCCCeEEEEEcCC
Q psy7058 38 AAFTLDSKFLLTASSDGVARLWNIET 63 (85)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~i~~~~~~~ 63 (85)
+.|.|-++.+.....++.+.+|.++.
T Consensus 47 lNW~pp~~~~~~~~~~g~~~v~svr~ 72 (224)
T PRK03298 47 LNWMSPPCTLTEEPPGGVEEVWRVEN 72 (224)
T ss_pred cccCCCCeEEEEEecCCcEEEEEEec
Confidence 44555555555544566677777664
No 482
>COG3211 PhoX Predicted phosphatase [General function prediction only]
Probab=29.27 E-value=1.6e+02 Score=18.86 Aligned_cols=20 Identities=20% Similarity=0.089 Sum_probs=15.5
Q ss_pred CCCcEEEEEecCCCCEEEEE
Q psy7058 31 NQRWVWDAAFTLDSKFLLTA 50 (85)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~ 50 (85)
..+.+...+|+||++.++.+
T Consensus 552 ~g~E~tG~~FspD~~TlFV~ 571 (616)
T COG3211 552 IGCEFTGPCFSPDGKTLFVN 571 (616)
T ss_pred CcceeecceeCCCCceEEEE
Confidence 45678999999998776654
No 483
>PF13964 Kelch_6: Kelch motif
Probab=28.95 E-value=46 Score=12.52 Aligned_cols=23 Identities=17% Similarity=0.203 Sum_probs=13.1
Q ss_pred CCCEEEEEcCCC------eEEEEEcCCcc
Q psy7058 43 DSKFLLTASSDG------VARLWNIETGE 65 (85)
Q Consensus 43 ~~~~~~~~~~~~------~i~~~~~~~~~ 65 (85)
++.+.+.|+.+. .+.+||+.+.+
T Consensus 11 ~~~iyv~GG~~~~~~~~~~v~~yd~~t~~ 39 (50)
T PF13964_consen 11 GGKIYVFGGYDNSGKYSNDVERYDPETNT 39 (50)
T ss_pred CCEEEEECCCCCCCCccccEEEEcCCCCc
Confidence 455555555433 56777776543
No 484
>PF14157 YmzC: YmzC-like protein; PDB: 3KVP_E.
Probab=28.50 E-value=60 Score=13.75 Aligned_cols=22 Identities=9% Similarity=0.391 Sum_probs=15.6
Q ss_pred CCCEEEEEcCCCeEEEEEcCCc
Q psy7058 43 DSKFLLTASSDGVARLWNIETG 64 (85)
Q Consensus 43 ~~~~~~~~~~~~~i~~~~~~~~ 64 (85)
....++..+.++.|+||.....
T Consensus 28 ~~N~Fav~~e~~~iKIfkyd~~ 49 (63)
T PF14157_consen 28 EHNHFAVVDEDGQIKIFKYDED 49 (63)
T ss_dssp STTEEEEE-ETTEEEEEEEETT
T ss_pred cCCEEEEEecCCeEEEEEeCCC
Confidence 4567777788999999876543
No 485
>TIGR00189 tesB acyl-CoA thioesterase II. Subunit: homotetramer.
Probab=27.88 E-value=1.1e+02 Score=16.63 Aligned_cols=51 Identities=14% Similarity=0.119 Sum_probs=27.0
Q ss_pred EeeCCCcEEEeeCCCceeeeee--e---cc-CCCcEEEEEecCCCCEEEEEcCCCeE
Q psy7058 6 TTSADQTARIWNTEDFSLVREL--G---TA-NQRWVWDAAFTLDSKFLLTASSDGVA 56 (85)
Q Consensus 6 ~~~~~~~i~~~d~~~~~~~~~~--~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~i 56 (85)
.++.|.++.+++.........+ . .. .......--|+.+|.++++..+++.+
T Consensus 214 ~aSldhtv~fh~~~~~~~W~l~~~~s~~~~~Grg~~~~~l~d~~G~lvAs~~Qe~l~ 270 (271)
T TIGR00189 214 AASLDHSIWFHRPFRADDWLLYKCSSPSASGSRGLVEGKIFTRDGVLIASTVQEGLV 270 (271)
T ss_pred EEeeeeeEEEeCCCCCCeeEEEEEEeccccCCceEEEEEEECCCCCEEEEEEeeeec
Confidence 4567777777664211111111 1 11 22334555677788888887776654
No 486
>PF13418 Kelch_4: Galactose oxidase, central domain; PDB: 2UVK_B.
Probab=27.80 E-value=47 Score=12.34 Aligned_cols=23 Identities=22% Similarity=0.370 Sum_probs=11.0
Q ss_pred CCCEEEEEcCCC------eEEEEEcCCcc
Q psy7058 43 DSKFLLTASSDG------VARLWNIETGE 65 (85)
Q Consensus 43 ~~~~~~~~~~~~------~i~~~~~~~~~ 65 (85)
++.+++.|+.+. .+.+||+.+.+
T Consensus 12 ~~~i~v~GG~~~~~~~~~d~~~~d~~~~~ 40 (49)
T PF13418_consen 12 DNSIYVFGGRDSSGSPLNDLWIFDIETNT 40 (49)
T ss_dssp TTEEEEE--EEE-TEE---EEEEETTTTE
T ss_pred CCeEEEECCCCCCCcccCCEEEEECCCCE
Confidence 455555554332 46677776543
No 487
>PF02381 MraZ: MraZ protein; InterPro: IPR020603 this entry represents the 70 amino acid region found duplicated in the bacterial proteins MraZ. These proteins may be DNA-binding transcription factors, its members are probably enzymes containing a conserved DXXXR motif that probably forms part of the active site.; PDB: 1N0F_E 1N0E_F 1N0G_A.
Probab=27.62 E-value=61 Score=13.56 Aligned_cols=18 Identities=22% Similarity=0.427 Sum_probs=13.5
Q ss_pred eeEEeeCCCcEEEeeCCC
Q psy7058 3 LLATTSADQTARIWNTED 20 (85)
Q Consensus 3 ~l~~~~~~~~i~~~d~~~ 20 (85)
.++..+.++++.+|+...
T Consensus 31 ~v~~~g~~~~leiw~~~~ 48 (72)
T PF02381_consen 31 EVVFVGFDDCLEIWPPEE 48 (72)
T ss_dssp EEEEEECCSEEEEEEHHH
T ss_pred eEEEeccCCEEEEcCHHH
Confidence 466677888999998653
No 488
>PF09081 DUF1921: Domain of unknown function (DUF1921); InterPro: IPR015165 This domain, which is found in a set of prokaryotic amylases, has no known function []. ; PDB: 1QI5_A 1JDC_A 2AMG_A 1QPK_A 1JDD_A 1QI4_A 1JDA_A 1GCY_A 1QI3_A.
Probab=27.41 E-value=55 Score=12.95 Aligned_cols=13 Identities=23% Similarity=0.734 Sum_probs=8.8
Q ss_pred EEEcCCCeEEEEE
Q psy7058 48 LTASSDGVARLWN 60 (85)
Q Consensus 48 ~~~~~~~~i~~~~ 60 (85)
+.-.++|.|+||.
T Consensus 39 a~N~dnG~vRiWr 51 (51)
T PF09081_consen 39 AVNEDNGQVRIWR 51 (51)
T ss_dssp EEEETTTTEEEEE
T ss_pred hhhccCCcEEeeC
Confidence 3445678899984
No 489
>KOG1900|consensus
Probab=27.20 E-value=2.4e+02 Score=20.20 Aligned_cols=33 Identities=12% Similarity=0.192 Sum_probs=28.5
Q ss_pred CCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCC
Q psy7058 31 NQRWVWDAAFTLDSKFLLTASSDGVARLWNIET 63 (85)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 63 (85)
+..+|..+.+......+.+-+..+.+..|++..
T Consensus 241 ~~dpI~qi~ID~SR~IlY~lsek~~v~~Y~i~~ 273 (1311)
T KOG1900|consen 241 SKDPIRQITIDNSRNILYVLSEKGTVSAYDIGG 273 (1311)
T ss_pred CCCcceeeEeccccceeeeeccCceEEEEEccC
Confidence 456788899988888899999999999999965
No 490
>KOG3611|consensus
Probab=27.20 E-value=1.9e+02 Score=19.11 Aligned_cols=55 Identities=18% Similarity=0.177 Sum_probs=33.1
Q ss_pred eEEeeCCCcEE-EeeCCCce-----eeeeeec-cCCCcEEEEEecCCCCEEEEEcCCCeEEE
Q psy7058 4 LATTSADQTAR-IWNTEDFS-----LVRELGT-ANQRWVWDAAFTLDSKFLLTASSDGVARL 58 (85)
Q Consensus 4 l~~~~~~~~i~-~~d~~~~~-----~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 58 (85)
+..|..+|+|. +-...+.. .+..+.. ....+|..+.+++....++.++..+.+++
T Consensus 428 lflGTd~G~vlKvV~~~~~~~~~~~llEElqvf~~~~pI~~m~Ls~~~~~LyVgs~~gV~qv 489 (737)
T KOG3611|consen 428 LFLGTDAGTVLKVVSPGKESGKSNVLLEELQVFPDAEPIRSMQLSSKRGSLYVGSRSGVVQV 489 (737)
T ss_pred EEEecCCCeEEEEEecCCccCccceeEEEEeecCCCCceeEEEecccCCeEEEEccCcEEEe
Confidence 45666666644 33322211 2333332 13467999999998888888888876654
No 491
>KOG0088|consensus
Probab=26.32 E-value=79 Score=16.40 Aligned_cols=18 Identities=17% Similarity=0.359 Sum_probs=13.7
Q ss_pred EEEcCCCeEEEEEcCCcc
Q psy7058 48 LTASSDGVARLWNIETGE 65 (85)
Q Consensus 48 ~~~~~~~~i~~~~~~~~~ 65 (85)
..-+++|.+.+||+.+..
T Consensus 82 YYRgSnGalLVyDITDrd 99 (218)
T KOG0088|consen 82 YYRGSNGALLVYDITDRD 99 (218)
T ss_pred EEeCCCceEEEEeccchH
Confidence 345688999999997653
No 492
>COG5169 HSF1 Heat shock transcription factor [Transcription]
Probab=26.28 E-value=1e+02 Score=17.44 Aligned_cols=18 Identities=6% Similarity=0.023 Sum_probs=13.2
Q ss_pred EEEEEecCCCCEEEEEcC
Q psy7058 35 VWDAAFTLDSKFLLTASS 52 (85)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~ 52 (85)
-.-|.|+|+|..++.-..
T Consensus 27 ~k~I~Ws~~G~sfvI~~~ 44 (282)
T COG5169 27 YKLIQWSPDGRSFVILDP 44 (282)
T ss_pred CCceEECCCCCEEEEeCc
Confidence 346899999987766553
No 493
>PF11635 Med16: Mediator complex subunit 16; InterPro: IPR021665 Mediator is a large complex of up to 33 proteins that is conserved from plants through fungi to humans - the number and representation of individual subunits varying with species [],[]. It is arranged into four different sections, a core, a head, a tail and a kinase-activity part, and the number of subunits within each of these is what varies with species. Overall, Mediator regulates the transcriptional activity of RNA polymerase II but it would appear that each of the four different sections has a slightly different function. Med16 is one of the subunits of the Tail portion of the Mediator complex and is required for lipopolysaccharide gene-expression []. Several members including the human protein, Q9Y2X0 from SWISSPROT, have one or more WD40 domains on them, PF00400 from PFAM.
Probab=25.29 E-value=2.1e+02 Score=18.86 Aligned_cols=38 Identities=18% Similarity=-0.004 Sum_probs=28.6
Q ss_pred CcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccc
Q psy7058 33 RWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEY 70 (85)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 70 (85)
..|.++....-+..++..-+||.|.++|-.+.+.+...
T Consensus 260 ~~V~si~~~~~~~~v~~~~~DGsI~~~dr~t~~~~~~~ 297 (753)
T PF11635_consen 260 KRVVSITSPELDIVVAFAFSDGSIEFRDRNTMKELNET 297 (753)
T ss_pred CeEEEEEecccCcEEEEEEcCCeEEEEecCcchhhccc
Confidence 45667776666778888889999999998877555433
No 494
>COG1637 Predicted nuclease of the RecB family [DNA replication, recombination, and repair]
Probab=24.93 E-value=1.4e+02 Score=16.72 Aligned_cols=27 Identities=19% Similarity=0.244 Sum_probs=20.1
Q ss_pred EEEecCCCCEEEEEcCCCeEEEEEcCC
Q psy7058 37 DAAFTLDSKFLLTASSDGVARLWNIET 63 (85)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~i~~~~~~~ 63 (85)
-+.|.|-++.+.....+|.+.+|.++.
T Consensus 72 P~nW~pp~s~~~~~~~~g~l~l~~ir~ 98 (253)
T COG1637 72 PLNWQPPGSSIAAAVRDGLLTLLSIRR 98 (253)
T ss_pred CcccCCCCceEEEeecCCceEEEEEcC
Confidence 466778788777777888888887754
No 495
>PF01407 Gemini_AL3: Geminivirus AL3 protein; InterPro: IPR000657 Geminiviruses are characterised by a genome of circular single-stranded DNA encapsidated in twinned (geminate) quasi-isometric particles, from which the group derives its name []. Most geminiviruses can be divided into two subgroups on the basis of host range and/or insect vector: i.e. those that infect dicotyledenous plants and are transmitted by the same whitefly species, and those that infect monocotyledenous plants and are transmitted by different leafhopper vectors. The genomes of the whitefly-transmitted African cassava mosaic virus, Tomato golden mosaic virus (TGMV) and Bean golden mosaic virus (BGMV) possess a bipartite genome. By contrast, only a single DNA component has been identified for the leafhopper-transmitted Maize streak virus (MSV) and Wheat dwarf virus (WDV) [, ]. Beet curly top virus (BCTV), and Tobacco yellow dwarf virus belong to a third possible subgroup. Like MSV and WDV, BCTV is transmitted by a specific leafhopper species, yet like the whitefly-transmitted geminiviruses it has a host range confined to dicotyledenous plants. Sequence comparison of the whitefly-transmitted Squash leaf curl virus (SqLCV) and Tomato yellow leaf curl virus (TYLCV) with the genomic components of TGMV and BGMV reveals a close evolutionary relationship [, , ]. Amino acid sequence alignments of Potato yellow mosaic virus (PYMV) proteins with those encoded by other geminiviruses show that PYMV is closely related to geminiviruses isolated from the New World, especially in the putative coat protein gene regions []. Comparison of MSV DNA-encoded proteins with those of other geminiviruses infecting monocotyledonous plants, including Panicum streak virus [] and Miscanthus streak virus (MiSV) [], reveal high levels of similarity. Geminiviruses contain three ORFs (designated AL1, AL2, and AL3) that overlap and are specified by multiple polycistronic mRNAs. The AL3 protein comprises approximately 0.05% of the cellular proteins and is present in the soluble and organelle fractions []. AL3 may form oligomers []. Immunoprecipitation of AL3 in a baculovirus expression system extracts expressing both AL1 and AL3 showed that the two proteins also complex with each other. The AL3 protein is involved in viral replication. ; GO: 0016032 viral reproduction
Probab=24.85 E-value=35 Score=16.48 Aligned_cols=11 Identities=9% Similarity=0.450 Sum_probs=5.5
Q ss_pred CeEEEEEcCCc
Q psy7058 54 GVARLWNIETG 64 (85)
Q Consensus 54 ~~i~~~~~~~~ 64 (85)
..+.+|++++.
T Consensus 15 ngvyiWev~NP 25 (120)
T PF01407_consen 15 NGVYIWEVPNP 25 (120)
T ss_pred CceeEEEcCCC
Confidence 34555555543
No 496
>PRK04247 hypothetical protein; Provisional
Probab=24.72 E-value=1.4e+02 Score=16.56 Aligned_cols=25 Identities=16% Similarity=0.036 Sum_probs=11.6
Q ss_pred EEecCCCCEEEEEcCCCeEEEEEcC
Q psy7058 38 AAFTLDSKFLLTASSDGVARLWNIE 62 (85)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~i~~~~~~ 62 (85)
+.|.|-++.+.....++.+.+|.++
T Consensus 72 vNW~~p~s~~~~~~~~g~~~l~~~r 96 (238)
T PRK04247 72 VNWQPPGSKTEAYVDDGRLVLESIR 96 (238)
T ss_pred cccCCCCcEEEEEecCCceEEEEEe
Confidence 3344444444333334555566554
No 497
>KOG4469|consensus
Probab=24.27 E-value=95 Score=16.91 Aligned_cols=15 Identities=40% Similarity=0.512 Sum_probs=9.7
Q ss_pred EcCCCeEEEEEcCCc
Q psy7058 50 ASSDGVARLWNIETG 64 (85)
Q Consensus 50 ~~~~~~i~~~~~~~~ 64 (85)
+.....+.+|++.++
T Consensus 205 atscrslhlynisdg 219 (391)
T KOG4469|consen 205 ATSCRSLHLYNISDG 219 (391)
T ss_pred hcccceeeeEeecCC
Confidence 344566788887665
No 498
>PLN02868 acyl-CoA thioesterase family protein
Probab=23.37 E-value=1.7e+02 Score=17.31 Aligned_cols=21 Identities=5% Similarity=0.243 Sum_probs=14.2
Q ss_pred EEEEEecCCCCEEEEEcCCCe
Q psy7058 35 VWDAAFTLDSKFLLTASSDGV 55 (85)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~ 55 (85)
...--|+.+|..++++.+++.
T Consensus 392 ~~g~l~~~~G~LvAs~~Qe~l 412 (413)
T PLN02868 392 ATGHMFNRKGELVVSLTQEAL 412 (413)
T ss_pred EEEEEECCCCCEEEEEEeeec
Confidence 445567778888887766653
No 499
>KOG2063|consensus
Probab=22.75 E-value=1.4e+02 Score=20.16 Aligned_cols=20 Identities=10% Similarity=0.077 Sum_probs=17.1
Q ss_pred CceeEEeeCCCcEEEeeCCC
Q psy7058 1 MGLLATTSADQTARIWNTED 20 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~ 20 (85)
|+.|..|+++|.+++|.+..
T Consensus 26 ~~~l~vGt~~G~L~lY~i~~ 45 (877)
T KOG2063|consen 26 GNHLYVGTRDGDLYLYSIYE 45 (877)
T ss_pred CCEEEEEcCCCcEEEEeccc
Confidence 57889999999999998754
No 500
>PRK05449 aspartate alpha-decarboxylase; Provisional
Probab=22.32 E-value=1e+02 Score=15.15 Aligned_cols=16 Identities=19% Similarity=0.364 Sum_probs=0.0
Q ss_pred eEEEEEcCCccccccc
Q psy7058 55 VARLWNIETGEVDKEY 70 (85)
Q Consensus 55 ~i~~~~~~~~~~~~~~ 70 (85)
.|.+|++.+|..+.++
T Consensus 43 ~V~V~Nv~NG~Rf~TY 58 (126)
T PRK05449 43 KVQIVNVNNGARFETY 58 (126)
T ss_pred EEEEEECCCCcEEEEE
Done!