Query psy7058
Match_columns 85
No_of_seqs 146 out of 1505
Neff 12.4
Searched_HMMs 29240
Date Fri Aug 16 17:02:57 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7058.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/7058hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ow8_A WD repeat-containing pr 99.9 1.7E-20 5.7E-25 97.7 11.7 84 1-85 218-301 (321)
2 2ynn_A Coatomer subunit beta'; 99.9 2E-20 7E-25 96.7 11.1 84 1-85 25-108 (304)
3 1vyh_C Platelet-activating fac 99.9 2E-20 7E-25 99.9 11.4 83 2-85 309-391 (410)
4 3ow8_A WD repeat-containing pr 99.9 2E-20 6.9E-25 97.5 10.9 84 1-85 176-259 (321)
5 2ynn_A Coatomer subunit beta'; 99.9 6.6E-20 2.3E-24 94.8 12.1 82 2-84 199-280 (304)
6 4gqb_B Methylosome protein 50; 99.9 2.5E-20 8.4E-25 98.0 10.5 82 2-85 228-310 (344)
7 4gqb_B Methylosome protein 50; 99.9 3.1E-20 1.1E-24 97.6 10.9 84 2-85 94-180 (344)
8 1vyh_C Platelet-activating fac 99.8 3.5E-20 1.2E-24 99.0 10.3 84 1-85 120-203 (410)
9 2xzm_R RACK1; ribosome, transl 99.8 1E-19 3.5E-24 95.2 11.7 84 1-85 39-129 (343)
10 3lrv_A PRE-mRNA-splicing facto 99.8 1E-19 3.4E-24 95.2 11.0 85 1-85 139-225 (343)
11 1got_B GT-beta; complex (GTP-b 99.8 3.3E-19 1.1E-23 93.3 11.9 83 2-85 155-237 (340)
12 3frx_A Guanine nucleotide-bind 99.8 2.6E-19 8.8E-24 93.1 10.8 83 2-85 31-118 (319)
13 4ery_A WD repeat-containing pr 99.8 7.1E-19 2.4E-23 90.9 12.0 84 1-85 35-118 (312)
14 2ymu_A WD-40 repeat protein; u 99.8 3.7E-19 1.3E-23 97.7 11.4 82 1-85 28-109 (577)
15 4ery_A WD repeat-containing pr 99.8 8.8E-19 3E-23 90.5 12.0 84 1-85 77-160 (312)
16 3vl1_A 26S proteasome regulato 99.8 7.8E-19 2.7E-23 93.4 11.6 84 1-85 109-192 (420)
17 4g56_B MGC81050 protein; prote 99.8 3.7E-19 1.3E-23 93.8 10.1 81 2-84 240-321 (357)
18 2pbi_B Guanine nucleotide-bind 99.8 1.3E-18 4.3E-23 91.7 12.0 83 2-85 167-251 (354)
19 1got_B GT-beta; complex (GTP-b 99.8 1.5E-18 5.1E-23 90.9 12.1 85 1-85 238-323 (340)
20 3frx_A Guanine nucleotide-bind 99.8 1.9E-18 6.6E-23 89.8 12.0 82 1-84 77-158 (319)
21 3fm0_A Protein CIAO1; WDR39,SG 99.8 1.6E-18 5.3E-23 91.0 10.8 85 1-85 28-116 (345)
22 2hes_X YDR267CP; beta-propelle 99.8 2.5E-18 8.4E-23 89.8 11.4 84 1-85 119-208 (330)
23 3k26_A Polycomb protein EED; W 99.8 3.3E-18 1.1E-22 89.3 11.6 84 1-85 85-172 (366)
24 4h5i_A Guanine nucleotide-exch 99.8 1.2E-18 4E-23 92.2 10.0 64 1-64 281-344 (365)
25 2pm7_B Protein transport prote 99.8 3.2E-18 1.1E-22 88.2 11.3 83 1-84 21-109 (297)
26 2hes_X YDR267CP; beta-propelle 99.8 4.6E-18 1.6E-22 88.8 11.5 84 1-85 70-164 (330)
27 3bg1_A Protein SEC13 homolog; 99.8 1.2E-18 4.1E-23 90.5 9.2 84 1-85 25-114 (316)
28 4gga_A P55CDC, cell division c 99.8 6.4E-18 2.2E-22 90.4 12.0 82 2-84 117-199 (420)
29 1nr0_A Actin interacting prote 99.8 4.7E-18 1.6E-22 94.5 11.9 82 3-85 162-250 (611)
30 2xzm_R RACK1; ribosome, transl 99.8 8.1E-18 2.8E-22 88.1 12.0 83 1-84 88-172 (343)
31 3dm0_A Maltose-binding peripla 99.8 6.4E-18 2.2E-22 94.9 12.2 83 2-85 396-483 (694)
32 2pbi_B Guanine nucleotide-bind 99.8 8.5E-18 2.9E-22 88.5 12.0 85 1-85 252-337 (354)
33 2ymu_A WD-40 repeat protein; u 99.8 4.1E-18 1.4E-22 93.5 11.0 82 1-85 479-560 (577)
34 2aq5_A Coronin-1A; WD40 repeat 99.8 6.6E-18 2.3E-22 89.8 11.1 84 1-85 94-187 (402)
35 3fm0_A Protein CIAO1; WDR39,SG 99.8 8.5E-18 2.9E-22 88.2 11.4 84 1-85 73-161 (345)
36 4gq1_A NUP37; propeller, trans 99.8 1.4E-18 4.8E-23 92.5 8.4 84 2-85 102-197 (393)
37 3iz6_a 40S ribosomal protein R 99.8 3.4E-18 1.2E-22 90.6 9.7 84 1-85 218-309 (380)
38 3zwl_B Eukaryotic translation 99.8 1.5E-17 5.1E-22 86.9 11.9 83 1-85 44-126 (369)
39 1erj_A Transcriptional repress 99.8 1.3E-17 4.5E-22 88.7 11.8 82 1-84 135-216 (393)
40 1pgu_A Actin interacting prote 99.8 9.2E-18 3.2E-22 92.4 11.5 85 1-85 500-595 (615)
41 3v7d_B Cell division control p 99.8 1.2E-17 4E-22 90.0 11.7 82 1-84 132-213 (464)
42 4g56_B MGC81050 protein; prote 99.8 5.3E-18 1.8E-22 89.4 9.8 82 3-84 107-191 (357)
43 3vu4_A KMHSV2; beta-propeller 99.8 9.2E-18 3.1E-22 88.4 10.6 78 7-85 155-251 (355)
44 1nr0_A Actin interacting prote 99.8 1.6E-17 5.5E-22 92.4 11.9 67 1-67 202-274 (611)
45 3iz6_a 40S ribosomal protein R 99.8 7.4E-18 2.5E-22 89.4 10.0 85 1-85 261-355 (380)
46 3v7d_B Cell division control p 99.8 1.9E-17 6.5E-22 89.2 11.6 83 1-84 280-362 (464)
47 4h5i_A Guanine nucleotide-exch 99.8 1.3E-17 4.4E-22 88.2 10.6 84 1-85 231-323 (365)
48 3sfz_A APAF-1, apoptotic pepti 99.8 1.6E-17 5.6E-22 97.3 11.9 83 1-84 627-709 (1249)
49 3f3f_A Nucleoporin SEH1; struc 99.8 2.4E-17 8.2E-22 85.3 11.2 83 1-84 23-120 (351)
50 3mkq_A Coatomer beta'-subunit; 99.8 1.6E-17 5.5E-22 94.0 11.1 84 1-85 25-108 (814)
51 3gre_A Serine/threonine-protei 99.8 2.5E-17 8.4E-22 88.2 11.3 84 1-84 182-267 (437)
52 4ggc_A P55CDC, cell division c 99.8 3.8E-17 1.3E-21 84.2 11.5 82 2-84 37-119 (318)
53 2j04_B YDR362CP, TAU91; beta p 99.8 2.3E-18 8E-23 94.7 6.7 84 2-85 324-408 (524)
54 1erj_A Transcriptional repress 99.8 3.3E-17 1.1E-21 87.2 10.9 83 1-84 268-362 (393)
55 2pm7_B Protein transport prote 99.8 4.9E-17 1.7E-21 83.9 11.0 84 1-85 113-215 (297)
56 3mmy_A MRNA export factor; mRN 99.8 5.8E-17 2E-21 84.6 11.2 80 1-82 54-135 (368)
57 3dwl_C Actin-related protein 2 99.8 2.8E-18 9.4E-23 90.3 6.1 84 1-85 23-111 (377)
58 4aez_A CDC20, WD repeat-contai 99.7 7.8E-17 2.7E-21 85.8 11.5 84 1-85 186-270 (401)
59 1sq9_A Antiviral protein SKI8; 99.7 5.9E-17 2E-21 85.6 10.9 85 1-85 245-365 (397)
60 3jrp_A Fusion protein of prote 99.7 2.9E-17 1E-21 86.1 9.7 84 1-85 23-112 (379)
61 3dwl_C Actin-related protein 2 99.7 1.6E-17 5.5E-22 87.5 8.6 83 1-85 158-262 (377)
62 3odt_A Protein DOA1; ubiquitin 99.7 7E-17 2.4E-21 83.0 10.7 81 3-85 197-277 (313)
63 1k8k_C P40, ARP2/3 complex 41 99.7 1.1E-16 3.7E-21 83.9 11.5 84 1-85 154-255 (372)
64 4aez_A CDC20, WD repeat-contai 99.7 1.2E-16 4E-21 85.1 11.5 83 2-84 104-186 (401)
65 4aow_A Guanine nucleotide-bind 99.7 1.9E-16 6.6E-21 82.1 11.9 82 2-85 186-267 (340)
66 3dm0_A Maltose-binding peripla 99.7 9.2E-17 3.2E-21 90.3 11.3 82 2-85 532-613 (694)
67 2aq5_A Coronin-1A; WD40 repeat 99.7 9.4E-17 3.2E-21 85.4 10.7 84 2-85 145-231 (402)
68 1gxr_A ESG1, transducin-like e 99.7 3E-16 1E-20 81.2 11.9 84 1-85 109-194 (337)
69 3bg1_A Protein SEC13 homolog; 99.7 6.6E-17 2.3E-21 84.0 9.3 83 2-85 180-273 (316)
70 3lrv_A PRE-mRNA-splicing facto 99.7 1.1E-16 3.7E-21 83.8 9.9 84 1-85 182-271 (343)
71 3mmy_A MRNA export factor; mRN 99.7 7.7E-17 2.6E-21 84.2 9.3 81 4-85 231-326 (368)
72 3vl1_A 26S proteasome regulato 99.7 2E-16 7E-21 84.2 11.0 82 1-83 151-235 (420)
73 2w18_A PALB2, fancn, partner a 99.7 8.8E-17 3E-21 84.7 9.4 85 1-85 193-337 (356)
74 3mkq_A Coatomer beta'-subunit; 99.7 2E-16 6.9E-21 89.6 11.5 83 1-84 67-150 (814)
75 1p22_A F-BOX/WD-repeat protein 99.7 2.6E-16 8.7E-21 84.5 11.1 81 1-84 143-223 (435)
76 1gxr_A ESG1, transducin-like e 99.7 5.2E-16 1.8E-20 80.3 11.9 83 1-85 153-235 (337)
77 2xyi_A Probable histone-bindin 99.7 3.6E-16 1.2E-20 84.0 11.6 83 2-85 245-332 (430)
78 2j04_B YDR362CP, TAU91; beta p 99.7 5.8E-17 2E-21 89.3 8.3 83 2-85 278-366 (524)
79 3k26_A Polycomb protein EED; W 99.7 1.8E-16 6.1E-21 82.8 9.8 84 1-84 128-241 (366)
80 3f3f_A Nucleoporin SEH1; struc 99.7 5.4E-16 1.8E-20 80.2 11.5 83 1-84 71-177 (351)
81 2oaj_A Protein SNI1; WD40 repe 99.7 2.5E-16 8.6E-21 91.0 11.0 81 1-83 500-631 (902)
82 3ei3_B DNA damage-binding prot 99.7 5.5E-16 1.9E-20 81.9 11.5 81 1-84 175-260 (383)
83 2j04_A TAU60, YPL007P, hypothe 99.7 3.6E-16 1.2E-20 86.7 10.8 82 1-85 97-193 (588)
84 2oaj_A Protein SNI1; WD40 repe 99.7 3.6E-16 1.2E-20 90.3 11.1 82 1-84 69-161 (902)
85 1k8k_C P40, ARP2/3 complex 41 99.7 3.7E-16 1.3E-20 81.9 10.4 84 1-85 20-107 (372)
86 1pgu_A Actin interacting prote 99.7 4E-16 1.4E-20 86.0 10.7 83 1-84 456-541 (615)
87 1r5m_A SIR4-interacting protei 99.7 6.1E-16 2.1E-20 82.0 10.9 83 1-85 259-341 (425)
88 3i2n_A WD repeat-containing pr 99.7 1E-15 3.6E-20 79.8 11.5 83 1-85 180-270 (357)
89 3jrp_A Fusion protein of prote 99.7 6.9E-16 2.4E-20 80.9 10.9 83 1-84 69-157 (379)
90 1r5m_A SIR4-interacting protei 99.7 5.3E-16 1.8E-20 82.3 10.5 82 3-85 302-405 (425)
91 3odt_A Protein DOA1; ubiquitin 99.7 1.3E-15 4.4E-20 78.3 11.6 83 1-84 29-114 (313)
92 4e54_B DNA damage-binding prot 99.7 5.1E-16 1.8E-20 83.5 10.4 84 1-85 177-261 (435)
93 2ovr_B FBW7, F-BOX/WD repeat p 99.7 9.9E-16 3.4E-20 82.4 11.3 81 1-84 129-209 (445)
94 3jro_A Fusion protein of prote 99.7 3.1E-16 1.1E-20 89.1 9.8 84 1-85 21-110 (753)
95 3i2n_A WD repeat-containing pr 99.7 1.6E-16 5.5E-21 82.8 8.0 85 1-85 224-332 (357)
96 3sfz_A APAF-1, apoptotic pepti 99.7 1.1E-15 3.9E-20 89.7 12.1 84 1-85 669-754 (1249)
97 1sq9_A Antiviral protein SKI8; 99.7 9.7E-16 3.3E-20 81.0 10.7 83 3-85 199-302 (397)
98 4gga_A P55CDC, cell division c 99.7 3.9E-16 1.3E-20 83.6 9.2 72 2-74 333-406 (420)
99 2oit_A Nucleoporin 214KDA; NH2 99.7 6.3E-16 2.2E-20 83.5 10.0 81 2-84 163-250 (434)
100 4ggc_A P55CDC, cell division c 99.7 5.2E-16 1.8E-20 79.9 9.2 59 6-65 259-317 (318)
101 2pm9_A Protein WEB1, protein t 99.7 2.1E-16 7.1E-21 83.9 7.9 84 2-85 228-316 (416)
102 3zwl_B Eukaryotic translation 99.7 2.8E-15 9.5E-20 78.3 11.8 83 1-85 187-270 (369)
103 3dw8_B Serine/threonine-protei 99.7 1.3E-15 4.6E-20 81.5 10.8 84 1-85 189-296 (447)
104 2w18_A PALB2, fancn, partner a 99.7 4.9E-16 1.7E-20 82.0 8.2 59 2-61 296-355 (356)
105 3ei3_B DNA damage-binding prot 99.7 2.5E-15 8.6E-20 79.4 11.0 82 2-85 132-215 (383)
106 3vu4_A KMHSV2; beta-propeller 99.7 1.7E-15 5.7E-20 79.9 10.3 64 1-64 207-272 (355)
107 4aow_A Guanine nucleotide-bind 99.7 3.8E-15 1.3E-19 77.3 11.5 83 1-84 51-138 (340)
108 2vdu_B TRNA (guanine-N(7)-)-me 99.7 2.6E-15 9.1E-20 81.0 11.0 69 2-71 211-279 (450)
109 4e54_B DNA damage-binding prot 99.7 6E-16 2.1E-20 83.2 8.4 83 1-85 221-307 (435)
110 2oit_A Nucleoporin 214KDA; NH2 99.7 2.6E-16 8.9E-21 85.0 6.9 85 1-85 104-203 (434)
111 1p22_A F-BOX/WD-repeat protein 99.7 3.5E-15 1.2E-19 80.2 10.9 81 1-84 266-346 (435)
112 1yfq_A Cell cycle arrest prote 99.7 2.1E-15 7.1E-20 78.4 9.8 82 1-84 23-111 (342)
113 3gre_A Serine/threonine-protei 99.7 1.4E-16 4.9E-21 85.3 5.5 73 1-73 226-302 (437)
114 3dw8_B Serine/threonine-protei 99.7 1.2E-15 4.2E-20 81.7 9.0 64 1-65 40-128 (447)
115 2xyi_A Probable histone-bindin 99.7 3E-15 1E-19 80.5 10.5 82 3-85 292-389 (430)
116 4a11_B DNA excision repair pro 99.7 7.5E-15 2.5E-19 77.6 11.5 83 2-85 157-256 (408)
117 2pm9_A Protein WEB1, protein t 99.7 4.7E-15 1.6E-19 78.7 10.7 83 2-84 179-272 (416)
118 4gq1_A NUP37; propeller, trans 99.7 4.6E-16 1.6E-20 82.9 6.9 64 2-66 157-221 (393)
119 2vdu_B TRNA (guanine-N(7)-)-me 99.7 5.1E-15 1.7E-19 79.9 10.7 85 1-85 114-206 (450)
120 1yfq_A Cell cycle arrest prote 99.7 3.6E-15 1.2E-19 77.5 9.7 80 1-81 206-301 (342)
121 3jro_A Fusion protein of prote 99.6 5.6E-15 1.9E-19 84.0 10.9 83 1-84 67-155 (753)
122 2j04_A TAU60, YPL007P, hypothe 99.6 7.3E-15 2.5E-19 81.7 9.0 81 1-83 141-235 (588)
123 4a11_B DNA excision repair pro 99.6 5.1E-14 1.7E-18 74.4 11.9 82 2-85 113-197 (408)
124 2ovr_B FBW7, F-BOX/WD repeat p 99.6 4E-14 1.4E-18 76.2 11.0 79 2-83 250-328 (445)
125 3bws_A Protein LP49; two-domai 99.5 1.1E-13 3.8E-18 74.0 9.0 84 2-85 135-222 (433)
126 1l0q_A Surface layer protein; 99.5 5.2E-13 1.8E-17 70.7 11.2 80 3-85 4-84 (391)
127 3bws_A Protein LP49; two-domai 99.5 2.1E-12 7.2E-17 69.1 11.0 83 1-85 181-264 (433)
128 1l0q_A Surface layer protein; 99.4 1.1E-11 3.9E-16 65.6 11.2 81 2-85 44-126 (391)
129 1nir_A Nitrite reductase; hemo 99.4 8.7E-12 3E-16 69.2 10.5 80 2-84 150-231 (543)
130 2hqs_A Protein TOLB; TOLB, PAL 99.4 2.6E-11 9E-16 65.3 11.7 82 1-85 190-277 (415)
131 2hqs_A Protein TOLB; TOLB, PAL 99.4 1.9E-11 6.5E-16 65.8 10.4 80 3-85 145-233 (415)
132 1k32_A Tricorn protease; prote 99.3 4.1E-11 1.4E-15 70.4 9.7 83 1-85 390-482 (1045)
133 2ecf_A Dipeptidyl peptidase IV 99.3 6.8E-11 2.3E-15 67.1 9.5 84 1-85 48-162 (741)
134 2ojh_A Uncharacterized protein 99.2 1.1E-10 3.8E-15 59.3 8.1 77 6-85 17-95 (297)
135 3u4y_A Uncharacterized protein 99.2 4.5E-10 1.5E-14 58.4 10.0 80 3-84 12-93 (331)
136 1nir_A Nitrite reductase; hemo 99.2 9.3E-10 3.2E-14 61.3 11.5 82 1-84 190-289 (543)
137 1jmx_B Amine dehydrogenase; ox 99.2 6.2E-10 2.1E-14 58.0 9.7 83 2-84 12-101 (349)
138 3o4h_A Acylamino-acid-releasin 99.2 7.1E-11 2.4E-15 65.6 6.4 78 1-81 161-244 (582)
139 1k32_A Tricorn protease; prote 99.2 4.6E-10 1.6E-14 66.1 9.5 82 2-85 349-431 (1045)
140 1xfd_A DIP, dipeptidyl aminope 99.2 9.2E-11 3.1E-15 66.3 5.9 83 1-85 28-124 (723)
141 2oiz_A Aromatic amine dehydrog 99.1 2.6E-09 8.8E-14 56.8 10.3 71 11-85 286-358 (361)
142 1pby_B Quinohemoprotein amine 99.1 1.3E-09 4.4E-14 56.5 8.7 83 2-84 2-91 (337)
143 3vgz_A Uncharacterized protein 99.1 2.4E-09 8.3E-14 55.9 9.7 82 2-84 153-240 (353)
144 2ojh_A Uncharacterized protein 99.1 1.9E-09 6.6E-14 54.7 8.9 82 2-85 141-227 (297)
145 3u4y_A Uncharacterized protein 99.1 3.1E-09 1.1E-13 55.2 9.6 83 1-85 51-138 (331)
146 1xfd_A DIP, dipeptidyl aminope 99.1 3.4E-09 1.2E-13 60.1 9.5 84 1-85 125-265 (723)
147 2ecf_A Dipeptidyl peptidase IV 99.1 4.1E-09 1.4E-13 59.9 9.7 67 1-70 120-188 (741)
148 3vgz_A Uncharacterized protein 99.1 9.3E-09 3.2E-13 53.7 10.3 82 3-84 103-194 (353)
149 1z68_A Fibroblast activation p 99.0 2E-09 6.7E-14 61.1 8.1 84 1-85 121-263 (719)
150 1pby_B Quinohemoprotein amine 99.0 5.9E-09 2E-13 54.0 8.7 68 2-73 253-320 (337)
151 1xip_A Nucleoporin NUP159; bet 99.0 1.1E-08 3.8E-13 55.2 9.8 77 1-85 97-173 (388)
152 1ri6_A Putative isomerase YBHE 99.0 3.5E-09 1.2E-13 55.0 7.8 81 1-84 49-138 (343)
153 1ri6_A Putative isomerase YBHE 99.0 4.4E-09 1.5E-13 54.6 8.0 79 4-85 8-94 (343)
154 1z68_A Fibroblast activation p 99.0 1.9E-09 6.4E-14 61.2 6.3 78 4-85 29-120 (719)
155 2z3z_A Dipeptidyl aminopeptida 99.0 5E-09 1.7E-13 59.4 7.8 84 1-85 132-268 (706)
156 4a5s_A Dipeptidyl peptidase 4 98.9 1.5E-08 5.2E-13 58.0 9.2 80 2-85 29-122 (740)
157 1jmx_B Amine dehydrogenase; ox 98.9 1.2E-08 4.1E-13 53.1 7.7 67 2-72 268-334 (349)
158 1xip_A Nucleoporin NUP159; bet 98.9 2.4E-08 8.2E-13 53.9 8.3 74 4-84 139-223 (388)
159 3scy_A Hypothetical bacterial 98.9 7.1E-08 2.4E-12 50.8 9.5 84 1-85 222-316 (361)
160 3o4h_A Acylamino-acid-releasin 98.9 2.1E-08 7.3E-13 55.9 7.7 77 4-85 125-205 (582)
161 3no2_A Uncharacterized protein 98.9 9.3E-08 3.2E-12 49.3 9.4 80 1-83 5-85 (276)
162 3hfq_A Uncharacterized protein 98.8 6.8E-07 2.3E-11 46.9 11.7 85 1-85 97-197 (347)
163 2z3z_A Dipeptidyl aminopeptida 98.8 5.4E-08 1.8E-12 55.2 7.8 84 1-84 269-365 (706)
164 3scy_A Hypothetical bacterial 98.8 3E-07 1E-11 48.5 10.0 82 1-84 270-361 (361)
165 3pe7_A Oligogalacturonate lyas 98.8 1.3E-07 4.4E-12 50.1 8.4 70 1-71 47-119 (388)
166 3azo_A Aminopeptidase; POP fam 98.8 6.6E-08 2.3E-12 54.6 7.4 83 1-85 141-252 (662)
167 1qks_A Cytochrome CD1 nitrite 98.7 8.6E-07 2.9E-11 50.0 11.1 78 3-83 169-248 (567)
168 3hfq_A Uncharacterized protein 98.7 5.5E-07 1.9E-11 47.2 9.9 85 1-85 198-296 (347)
169 1jof_A Carboxy-CIS,CIS-muconat 98.7 1.1E-06 3.9E-11 46.6 10.9 77 9-85 117-203 (365)
170 2gop_A Trilobed protease; beta 98.7 5.9E-07 2E-11 47.0 8.9 80 1-85 70-181 (347)
171 4a5s_A Dipeptidyl peptidase 4 98.7 2.5E-07 8.5E-12 53.2 7.8 64 1-67 73-145 (740)
172 2dg1_A DRP35, lactonase; beta 98.6 3.5E-06 1.2E-10 44.0 11.5 82 2-84 57-144 (333)
173 2xdw_A Prolyl endopeptidase; a 98.6 6E-07 2.1E-11 51.4 8.8 83 1-85 136-243 (710)
174 3fvz_A Peptidyl-glycine alpha- 98.6 2.9E-06 9.9E-11 44.5 10.7 82 2-84 156-250 (329)
175 1jof_A Carboxy-CIS,CIS-muconat 98.6 1.2E-07 4E-12 50.3 5.5 84 1-85 51-155 (365)
176 2bkl_A Prolyl endopeptidase; m 98.6 2.4E-07 8.3E-12 52.9 7.0 83 1-85 132-237 (695)
177 3azo_A Aminopeptidase; POP fam 98.6 1.6E-06 5.4E-11 49.1 10.0 66 1-66 199-277 (662)
178 3fvz_A Peptidyl-glycine alpha- 98.6 5.4E-06 1.8E-10 43.5 11.4 74 11-84 69-152 (329)
179 2oiz_A Aromatic amine dehydrog 98.6 4.3E-07 1.5E-11 48.4 7.3 60 9-71 29-98 (361)
180 1q7f_A NHL, brain tumor CG1071 98.5 1.1E-05 3.8E-10 41.3 10.6 81 2-84 176-260 (286)
181 1q7f_A NHL, brain tumor CG1071 98.5 1.2E-05 4E-10 41.2 10.5 73 10-84 99-173 (286)
182 3pe7_A Oligogalacturonate lyas 98.4 1.6E-05 5.4E-10 42.2 10.7 82 1-84 92-197 (388)
183 3e5z_A Putative gluconolactona 98.4 1.4E-05 4.8E-10 41.2 9.4 61 3-66 42-102 (296)
184 2gop_A Trilobed protease; beta 98.3 1E-05 3.4E-10 42.4 8.5 77 1-84 226-311 (347)
185 3dsm_A Uncharacterized protein 98.3 4.5E-05 1.5E-09 40.1 10.7 72 11-84 203-276 (328)
186 1qks_A Cytochrome CD1 nitrite 98.3 4.8E-05 1.6E-09 43.1 11.0 69 1-71 208-283 (567)
187 3dsm_A Uncharacterized protein 98.3 2.1E-05 7.1E-10 41.4 8.9 80 3-84 142-234 (328)
188 3c5m_A Oligogalacturonate lyas 98.3 3.8E-06 1.3E-10 44.5 6.2 67 1-68 47-116 (396)
189 2hz6_A Endoplasmic reticulum t 98.3 1.5E-06 5.1E-11 46.5 4.3 67 1-70 9-75 (369)
190 3e5z_A Putative gluconolactona 98.3 2.1E-05 7E-10 40.6 8.4 77 2-83 184-264 (296)
191 3no2_A Uncharacterized protein 98.3 5.4E-05 1.8E-09 39.1 9.8 68 1-71 136-203 (276)
192 2mad_H Methylamine dehydrogena 98.2 7.4E-05 2.5E-09 40.2 9.8 57 12-71 48-114 (373)
193 2dg1_A DRP35, lactonase; beta 98.2 1.4E-05 4.9E-10 41.7 6.9 73 8-84 24-96 (333)
194 3sjl_D Methylamine dehydrogena 98.2 2.1E-05 7.2E-10 42.7 7.3 59 10-71 58-126 (386)
195 1pjx_A Dfpase, DIISOPROPYLFLUO 98.2 9.9E-05 3.4E-09 38.1 10.2 79 5-84 192-277 (314)
196 1rwi_B Serine/threonine-protei 98.1 9.8E-05 3.3E-09 37.4 10.4 82 2-84 162-243 (270)
197 2mad_H Methylamine dehydrogena 98.1 0.00015 5.2E-09 39.1 10.4 57 11-69 298-356 (373)
198 3c5m_A Oligogalacturonate lyas 98.1 5.4E-06 1.9E-10 43.9 4.6 82 1-84 92-197 (396)
199 1mda_H Methylamine dehydrogena 98.1 3.7E-05 1.3E-09 41.5 7.3 57 12-71 47-113 (368)
200 3sjl_D Methylamine dehydrogena 98.0 0.0001 3.5E-09 40.1 8.4 70 11-83 311-382 (386)
201 3g4e_A Regucalcin; six bladed 98.0 0.00018 6E-09 37.3 8.9 80 4-83 164-249 (297)
202 2xdw_A Prolyl endopeptidase; a 98.0 0.00023 7.9E-09 41.1 10.0 51 13-63 210-268 (710)
203 3c75_H MADH, methylamine dehyd 98.0 4.1E-05 1.4E-09 42.1 6.6 58 11-71 99-166 (426)
204 1rwi_B Serine/threonine-protei 98.0 0.00017 5.7E-09 36.5 8.3 64 2-66 204-267 (270)
205 1yr2_A Prolyl oligopeptidase; 98.0 6.9E-05 2.4E-09 43.4 7.5 82 1-85 174-278 (741)
206 1mda_H Methylamine dehydrogena 98.0 0.00024 8.2E-09 38.4 9.1 70 11-83 294-365 (368)
207 2bkl_A Prolyl endopeptidase; m 98.0 0.00021 7E-09 41.2 9.3 64 1-64 179-262 (695)
208 1pjx_A Dfpase, DIISOPROPYLFLUO 97.8 0.0006 2.1E-08 35.2 9.5 61 2-63 238-299 (314)
209 3hrp_A Uncharacterized protein 97.8 0.00048 1.6E-08 37.5 8.6 61 2-65 143-205 (409)
210 3c75_H MADH, methylamine dehyd 97.8 0.00024 8.2E-09 39.2 7.3 58 11-70 350-409 (426)
211 2hz6_A Endoplasmic reticulum t 97.6 9.3E-06 3.2E-10 43.5 0.3 65 2-71 93-157 (369)
212 3iuj_A Prolyl endopeptidase; h 97.6 0.00035 1.2E-08 40.4 6.5 72 10-84 154-243 (693)
213 2z2n_A Virginiamycin B lyase; 97.6 0.0014 4.9E-08 33.4 11.2 82 2-84 27-108 (299)
214 2z2n_A Virginiamycin B lyase; 97.5 0.0018 6.1E-08 33.1 11.1 81 2-84 111-192 (299)
215 1yiq_A Quinohemoprotein alcoho 97.5 0.00024 8.1E-09 41.2 5.1 62 10-73 454-515 (689)
216 2ghs_A AGR_C_1268P; regucalcin 97.4 0.0033 1.1E-07 33.1 10.9 78 5-83 195-279 (326)
217 2iwa_A Glutamine cyclotransfer 97.3 0.0039 1.3E-07 32.4 9.9 82 2-84 117-215 (266)
218 3nol_A Glutamine cyclotransfer 97.3 0.0041 1.4E-07 32.3 9.9 82 2-84 137-234 (262)
219 3g4e_A Regucalcin; six bladed 97.2 0.0053 1.8E-07 31.8 10.8 77 3-84 27-107 (297)
220 3q7m_A Lipoprotein YFGL, BAMB; 97.2 0.0059 2E-07 32.6 7.6 68 2-71 278-345 (376)
221 2qc5_A Streptogramin B lactona 97.2 0.0063 2.1E-07 31.1 11.2 81 2-84 32-113 (300)
222 1kb0_A Quinohemoprotein alcoho 97.1 0.0013 4.5E-08 38.1 5.2 60 11-72 457-516 (677)
223 1yr2_A Prolyl oligopeptidase; 97.1 0.013 4.5E-07 34.3 10.0 82 2-84 328-416 (741)
224 3nok_A Glutaminyl cyclase; bet 97.1 0.0084 2.9E-07 31.3 8.6 68 2-71 66-133 (268)
225 2qc5_A Streptogramin B lactona 97.1 0.0077 2.6E-07 30.7 11.2 80 2-84 74-155 (300)
226 2ece_A 462AA long hypothetical 97.1 0.011 3.8E-07 33.2 8.0 62 11-72 164-246 (462)
227 3nok_A Glutaminyl cyclase; bet 97.0 0.0094 3.2E-07 31.1 9.8 82 2-84 146-244 (268)
228 3mbr_X Glutamine cyclotransfer 97.0 0.0088 3E-07 30.8 10.3 82 2-84 115-213 (243)
229 3q7m_A Lipoprotein YFGL, BAMB; 97.0 0.011 3.9E-07 31.5 8.8 69 2-71 54-130 (376)
230 2iwa_A Glutamine cyclotransfer 97.0 0.011 3.6E-07 30.8 8.9 65 4-71 79-143 (266)
231 2ghs_A AGR_C_1268P; regucalcin 97.0 0.012 4E-07 31.0 9.9 77 3-84 63-143 (326)
232 2qe8_A Uncharacterized protein 97.0 0.012 4.2E-07 31.2 9.9 59 10-68 92-159 (343)
233 3hxj_A Pyrrolo-quinoline quino 96.8 0.014 4.9E-07 30.3 7.0 66 2-71 108-173 (330)
234 3dr2_A Exported gluconolactona 96.8 0.016 5.6E-07 30.1 9.5 57 3-62 59-115 (305)
235 3mbr_X Glutamine cyclotransfer 96.7 0.018 6.1E-07 29.7 9.4 64 4-71 78-141 (243)
236 3nol_A Glutamine cyclotransfer 96.6 0.023 7.7E-07 29.7 8.9 67 3-71 55-124 (262)
237 1kv9_A Type II quinohemoprotei 96.6 0.0054 1.8E-07 35.7 4.8 62 9-72 436-497 (668)
238 3iuj_A Prolyl endopeptidase; h 96.5 0.045 1.5E-06 31.9 9.9 53 12-64 209-269 (693)
239 1yiq_A Quinohemoprotein alcoho 96.5 0.0086 2.9E-07 35.0 5.4 48 1-48 486-533 (689)
240 3hxj_A Pyrrolo-quinoline quino 96.5 0.017 5.7E-07 30.0 6.1 61 3-69 149-209 (330)
241 1kb0_A Quinohemoprotein alcoho 96.5 0.022 7.7E-07 33.3 6.8 48 1-48 488-535 (677)
242 3hrp_A Uncharacterized protein 96.4 0.045 1.6E-06 30.0 11.2 61 3-65 281-356 (409)
243 3dr2_A Exported gluconolactona 96.4 0.037 1.3E-06 28.8 7.6 80 2-84 98-197 (305)
244 1flg_A Protein (quinoprotein e 96.2 0.0084 2.9E-07 34.4 4.2 61 10-72 465-525 (582)
245 2ad6_A Methanol dehydrogenase 96.2 0.011 3.7E-07 33.9 4.5 61 9-71 442-502 (571)
246 2ece_A 462AA long hypothetical 96.1 0.078 2.7E-06 30.0 8.4 68 3-71 98-181 (462)
247 2xe4_A Oligopeptidase B; hydro 95.9 0.035 1.2E-06 32.8 5.8 51 12-65 202-258 (751)
248 2qe8_A Uncharacterized protein 95.7 0.08 2.8E-06 28.1 6.3 55 1-55 259-313 (343)
249 2ad6_A Methanol dehydrogenase 95.6 0.069 2.4E-06 30.7 6.1 68 2-71 116-193 (571)
250 1kv9_A Type II quinohemoprotei 95.6 0.061 2.1E-06 31.5 5.8 70 2-71 118-195 (668)
251 1w6s_A Methanol dehydrogenase 95.5 0.034 1.1E-06 32.2 4.7 61 9-71 451-511 (599)
252 4gq2_M Nucleoporin NUP120; bet 95.4 0.048 1.7E-06 33.3 5.1 36 34-69 237-272 (950)
253 1flg_A Protein (quinoprotein e 95.3 0.068 2.3E-06 30.8 5.4 47 1-47 497-543 (582)
254 3qqz_A Putative uncharacterize 95.2 0.14 4.7E-06 26.6 10.6 61 3-64 41-101 (255)
255 1w6s_A Methanol dehydrogenase 94.4 0.16 5.6E-06 29.5 5.4 46 1-46 484-529 (599)
256 3tc9_A Hypothetical hydrolase; 94.4 0.32 1.1E-05 27.0 9.3 59 4-62 241-300 (430)
257 4fhn_B Nucleoporin NUP120; pro 94.0 0.048 1.6E-06 33.9 2.9 33 37-69 242-274 (1139)
258 2p4o_A Hypothetical protein; p 93.9 0.33 1.1E-05 25.4 7.4 77 4-83 182-263 (306)
259 1npe_A Nidogen, entactin; glyc 93.6 0.34 1.2E-05 24.6 11.0 58 5-63 52-110 (267)
260 1k3i_A Galactose oxidase precu 93.5 0.62 2.1E-05 27.2 6.9 63 2-64 255-324 (656)
261 3f7f_A Nucleoporin NUP120; nuc 93.3 0.13 4.5E-06 30.8 3.8 34 35-70 224-257 (729)
262 1k3i_A Galactose oxidase precu 93.3 0.67 2.3E-05 27.1 7.5 53 12-64 220-275 (656)
263 3pbp_A Nucleoporin NUP82; beta 93.1 0.28 9.6E-06 27.8 4.7 32 32-63 124-158 (452)
264 1npe_A Nidogen, entactin; glyc 93.1 0.43 1.5E-05 24.2 9.8 77 5-84 183-260 (267)
265 2xe4_A Oligopeptidase B; hydro 92.5 1 3.4E-05 26.9 10.8 53 12-64 248-305 (751)
266 1fwx_A Nitrous oxide reductase 92.5 0.96 3.3E-05 26.7 7.7 61 1-63 288-361 (595)
267 4hw6_A Hypothetical protein, I 92.5 0.78 2.7E-05 25.6 8.7 59 4-62 243-303 (433)
268 3f7f_A Nucleoporin NUP120; nuc 92.3 0.34 1.2E-05 29.1 4.5 28 2-29 232-259 (729)
269 2be1_A Serine/threonine-protei 92.2 0.77 2.6E-05 25.0 6.3 64 2-65 11-78 (339)
270 1fwx_A Nitrous oxide reductase 91.7 1.3 4.3E-05 26.2 9.2 70 2-71 102-192 (595)
271 3ei3_A DNA damage-binding prot 91.5 1.8 6E-05 27.6 8.8 64 3-67 525-595 (1158)
272 4fhn_B Nucleoporin NUP120; pro 91.2 0.43 1.5E-05 29.9 4.3 27 2-28 250-276 (1139)
273 4gq2_M Nucleoporin NUP120; bet 91.1 0.47 1.6E-05 29.3 4.3 27 2-28 248-274 (950)
274 2xzh_A Clathrin heavy chain 1; 89.4 1.7 5.8E-05 24.1 8.8 61 4-65 274-334 (365)
275 2be1_A Serine/threonine-protei 88.9 0.58 2E-05 25.4 3.3 64 8-71 64-138 (339)
276 1n7d_A LDL receptor, low-densi 88.8 1.2 4E-05 26.6 4.7 54 8-62 472-527 (699)
277 2p9w_A MAL S 1 allergenic prot 87.7 2.2 7.5E-05 23.3 7.4 29 35-63 187-215 (334)
278 3qqz_A Putative uncharacterize 86.8 2.1 7.3E-05 22.3 8.9 59 1-61 185-251 (255)
279 2p4o_A Hypothetical protein; p 86.6 2.2 7.7E-05 22.2 9.4 61 2-65 44-106 (306)
280 3v64_C Agrin; beta propeller, 86.1 2.7 9.2E-05 22.6 11.0 57 5-62 132-190 (349)
281 3das_A Putative oxidoreductase 85.9 2.9 9.9E-05 22.9 6.8 52 33-84 32-89 (347)
282 2fp8_A Strictosidine synthase; 85.5 2.7 9.1E-05 22.1 7.9 51 11-63 165-216 (322)
283 3v64_C Agrin; beta propeller, 84.2 3.4 0.00012 22.2 10.0 29 35-63 118-147 (349)
284 1bpo_A Protein (clathrin); cla 83.6 4.7 0.00016 23.4 9.6 61 4-65 273-333 (494)
285 3v65_B Low-density lipoprotein 82.8 4.2 0.00014 22.2 10.7 56 6-62 176-233 (386)
286 3kya_A Putative phosphatase; s 82.7 5.2 0.00018 23.2 7.5 59 3-61 261-339 (496)
287 3sre_A PON1, serum paraoxonase 80.9 4.1 0.00014 22.4 4.2 30 34-63 222-252 (355)
288 3amr_A 3-phytase; beta-propell 79.8 5.9 0.0002 21.9 7.1 56 3-62 42-107 (355)
289 1n7d_A LDL receptor, low-densi 79.1 3.9 0.00013 24.5 4.0 28 36-63 456-484 (699)
290 3sov_A LRP-6, low-density lipo 79.0 5.6 0.00019 21.2 9.3 29 35-63 81-110 (318)
291 3p5b_L Low density lipoprotein 78.7 6.4 0.00022 21.7 11.3 54 8-62 178-233 (400)
292 1ijq_A LDL receptor, low-densi 78.1 5.8 0.0002 20.9 11.5 56 6-62 94-151 (316)
293 2xzh_A Clathrin heavy chain 1; 77.9 7 0.00024 21.8 6.5 44 35-78 262-305 (365)
294 3p5b_L Low density lipoprotein 77.4 7.1 0.00024 21.6 10.3 31 34-64 160-191 (400)
295 1ijq_A LDL receptor, low-densi 77.2 6.3 0.00021 20.8 9.6 29 35-63 79-108 (316)
296 3sov_A LRP-6, low-density lipo 75.8 7.2 0.00025 20.8 10.5 56 6-62 96-153 (318)
297 4a9v_A PHOX; hydrolase, beta-p 74.6 11 0.00039 22.5 6.4 39 12-50 510-548 (592)
298 3v65_B Low-density lipoprotein 74.4 8.6 0.00029 21.1 9.6 64 6-71 263-326 (386)
299 3pbp_A Nucleoporin NUP82; beta 74.3 10 0.00035 21.9 8.8 51 34-85 67-135 (452)
300 2fp8_A Strictosidine synthase; 73.1 8.2 0.00028 20.2 10.0 62 4-65 94-176 (322)
301 3tc9_A Hypothetical hydrolase; 71.8 11 0.00037 21.1 8.2 31 35-65 228-259 (430)
302 2p9w_A MAL S 1 allergenic prot 70.8 11 0.00038 20.7 8.9 66 3-68 27-117 (334)
303 3m0c_C LDL receptor, low-densi 70.4 16 0.00056 22.5 9.6 29 35-63 473-502 (791)
304 1bpo_A Protein (clathrin); cla 69.9 14 0.00048 21.6 6.7 45 34-78 260-304 (494)
305 3m0c_C LDL receptor, low-densi 69.5 17 0.00059 22.4 11.5 58 4-62 486-545 (791)
306 2vpj_A Kelch-like protein 12; 68.8 10 0.00035 19.6 5.8 61 3-65 209-280 (301)
307 4a2l_A BT_4663, two-component 67.6 18 0.00061 21.9 10.4 60 4-64 186-245 (795)
308 2xn4_A Kelch-like protein 2; s 67.2 11 0.00038 19.5 6.0 61 3-65 207-278 (302)
309 3amr_A 3-phytase; beta-propell 66.6 14 0.0005 20.5 8.2 58 3-62 145-209 (355)
310 3s94_A LRP-6, low-density lipo 62.0 23 0.00077 21.1 9.7 31 33-63 84-115 (619)
311 3mwp_A Nucleoprotein; structur 59.8 3.4 0.00012 23.8 0.9 19 49-67 162-180 (577)
312 2ism_A Putative oxidoreductase 58.0 20 0.0007 19.4 6.3 26 34-60 32-57 (352)
313 3zwu_A Alkaline phosphatase PH 57.6 28 0.00097 20.9 7.9 38 13-50 511-548 (592)
314 1xi4_A Clathrin heavy chain; a 54.1 51 0.0018 22.8 6.3 59 4-63 273-331 (1630)
315 3ii7_A Kelch-like protein 7; p 53.3 22 0.00077 18.4 6.0 59 3-64 58-128 (306)
316 2wg3_C Hedgehog-interacting pr 50.6 34 0.0012 19.7 5.8 27 35-61 16-43 (463)
317 3ei3_A DNA damage-binding prot 50.4 51 0.0017 21.6 8.6 60 2-61 572-634 (1158)
318 1cru_A Protein (soluble quinop 50.1 34 0.0012 19.5 8.0 24 33-56 405-429 (454)
319 2g8s_A Glucose/sorbosone dehyd 49.4 30 0.001 18.8 7.1 48 3-50 291-340 (353)
320 4a2l_A BT_4663, two-component 46.7 47 0.0016 20.2 11.2 62 4-65 370-438 (795)
321 3al9_A Plexin-A2; beta-propell 44.9 47 0.0016 19.7 5.3 55 4-58 416-476 (539)
322 4a0p_A LRP6, LRP-6, low-densit 42.8 53 0.0018 19.7 10.0 29 35-63 82-111 (628)
323 1zgk_A Kelch-like ECH-associat 41.9 37 0.0013 17.7 6.0 61 3-65 218-289 (308)
324 3ol2_B Plexin-B1; beta-propell 38.0 63 0.0022 19.2 6.3 55 4-58 403-461 (528)
325 4hw6_A Hypothetical protein, I 37.8 55 0.0019 18.4 7.8 27 35-61 404-431 (433)
326 1ukf_A Avirulence protein AVRP 37.6 37 0.0013 17.2 2.5 22 4-25 134-155 (188)
327 3v9f_A Two-component system se 35.5 75 0.0026 19.3 10.6 60 4-65 420-480 (781)
328 1xi4_A Clathrin heavy chain; a 34.8 1.2E+02 0.004 21.3 5.2 36 36-71 262-297 (1630)
329 3s94_A LRP-6, low-density lipo 34.1 77 0.0026 19.0 10.0 29 35-63 394-423 (619)
330 4hvt_A Ritya.17583.B, post-pro 33.8 55 0.0019 20.1 3.2 33 35-67 131-169 (711)
331 3kya_A Putative phosphatase; s 33.3 75 0.0026 18.7 7.1 49 5-53 156-213 (496)
332 2xbg_A YCF48-like protein; pho 32.7 59 0.002 17.3 10.5 37 21-57 151-187 (327)
333 4gz8_A Semaphorin-3A; multi-do 31.7 93 0.0032 19.2 7.4 28 31-58 468-495 (667)
334 1sr4_A CDT A, cytolethal diste 31.3 45 0.0016 17.1 2.3 18 7-24 65-82 (206)
335 4asc_A Kelch repeat and BTB do 30.8 62 0.0021 16.9 6.1 22 43-64 196-222 (315)
336 1q47_A Semaphorin 3A; beta pro 29.2 91 0.0031 18.3 7.2 27 32-58 461-487 (495)
337 2zwa_A Leucine carboxyl methyl 29.0 1E+02 0.0035 18.8 6.6 23 42-64 499-523 (695)
338 2woz_A Kelch repeat and BTB do 27.3 74 0.0025 16.6 5.6 22 43-64 158-185 (318)
339 3u0a_A Acyl-COA thioesterase I 26.2 74 0.0025 16.9 2.7 26 34-59 252-277 (285)
340 3rd7_A Acyl-COA thioesterase; 25.5 52 0.0018 17.5 2.0 23 35-57 260-282 (286)
341 1uhe_A Aspartate 1-decarboxyla 22.5 65 0.0022 14.4 1.8 17 55-71 18-34 (97)
342 1vc3_B L-aspartate-alpha-decar 21.1 71 0.0024 14.2 1.8 18 54-71 18-35 (96)
343 1tl2_A L10, protein (tachylect 20.7 1.1E+02 0.0037 16.2 7.3 58 3-63 6-69 (236)
No 1
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.86 E-value=1.7e-20 Score=97.75 Aligned_cols=84 Identities=24% Similarity=0.447 Sum_probs=77.8
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEE
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSL 80 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~ 80 (85)
+++|++++.|+.|++||+++++....+.. +...+.+++|+|++.++++++.|+.|++||+.+++++..+..|...|.++
T Consensus 218 ~~~l~s~s~dg~i~iwd~~~~~~~~~~~~-h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v 296 (321)
T 3ow8_A 218 SQLLVTASDDGYIKIYDVQHANLAGTLSG-HASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGV 296 (321)
T ss_dssp SCEEEEECTTSCEEEEETTTCCEEEEECC-CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEE
T ss_pred CCEEEEEcCCCeEEEEECCCcceeEEEcC-CCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEE
Confidence 46899999999999999999888887776 88889999999999999999999999999999999999999999999999
Q ss_pred EEeCC
Q psy7058 81 AFCDF 85 (85)
Q Consensus 81 ~~~~~ 85 (85)
+|+|.
T Consensus 297 ~~s~~ 301 (321)
T 3ow8_A 297 KYNGN 301 (321)
T ss_dssp EECTT
T ss_pred EECCC
Confidence 99873
No 2
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.86 E-value=2e-20 Score=96.65 Aligned_cols=84 Identities=24% Similarity=0.306 Sum_probs=78.2
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEE
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSL 80 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~ 80 (85)
|++|++++.|+.+++||+.++.....+.. +..++.++.|+|++.++++++.|+.|++||+.+++.+..+.+|...|+++
T Consensus 25 ~~~l~s~~~dg~v~lWd~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~~ 103 (304)
T 2ynn_A 25 EPWVLTTLYSGRVELWNYETQVEVRSIQV-TETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSI 103 (304)
T ss_dssp SSEEEEEETTSEEEEEETTTTEEEEEEEC-CSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEE
T ss_pred CCEEEEEcCCCcEEEEECCCCceeEEeec-cCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEEEEeCCCCcEEEE
Confidence 46899999999999999999988888876 77789999999999999999999999999999999999999999999999
Q ss_pred EEeCC
Q psy7058 81 AFCDF 85 (85)
Q Consensus 81 ~~~~~ 85 (85)
+|+|.
T Consensus 104 ~~~~~ 108 (304)
T 2ynn_A 104 AVHPT 108 (304)
T ss_dssp EECSS
T ss_pred EEcCC
Confidence 99874
No 3
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.86 E-value=2e-20 Score=99.94 Aligned_cols=83 Identities=25% Similarity=0.475 Sum_probs=77.6
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEEE
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSLA 81 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~ 81 (85)
.++++++.|+.|++||+.+++....+.+ |...+.++.|+|++.++++++.|+.|++||+.+++++..+.+|...|.+++
T Consensus 309 ~~l~sgs~D~~i~iwd~~~~~~~~~~~~-h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~~v~~l~ 387 (410)
T 1vyh_C 309 PFLLSGSRDKTIKMWDVSTGMCLMTLVG-HDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLD 387 (410)
T ss_dssp CEEEEEETTSEEEEEETTTTEEEEEEEC-CSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSSCEEEEE
T ss_pred CEEEEEeCCCeEEEEECCCCceEEEEEC-CCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEE
Confidence 5799999999999999999998888877 888899999999999999999999999999999999999999999999999
Q ss_pred EeCC
Q psy7058 82 FCDF 85 (85)
Q Consensus 82 ~~~~ 85 (85)
|+|.
T Consensus 388 ~~~~ 391 (410)
T 1vyh_C 388 FHKT 391 (410)
T ss_dssp ECSS
T ss_pred EcCC
Confidence 9874
No 4
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.86 E-value=2e-20 Score=97.45 Aligned_cols=84 Identities=25% Similarity=0.406 Sum_probs=77.9
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEE
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSL 80 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~ 80 (85)
|++|++++.|+.|++||+.+++....+.. +..++.+++|+|++.++++++.|+.|++||++.++....+.+|...|.++
T Consensus 176 g~~lasg~~dg~i~iwd~~~~~~~~~~~~-h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~ 254 (321)
T 3ow8_A 176 GKYLASGAIDGIINIFDIATGKLLHTLEG-HAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNV 254 (321)
T ss_dssp SSEEEEEETTSCEEEEETTTTEEEEEECC-CSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEE
T ss_pred CCEEEEEcCCCeEEEEECCCCcEEEEEcc-cCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEE
Confidence 46899999999999999999998888876 77889999999999999999999999999999999888999999999999
Q ss_pred EEeCC
Q psy7058 81 AFCDF 85 (85)
Q Consensus 81 ~~~~~ 85 (85)
+|+|.
T Consensus 255 ~~sp~ 259 (321)
T 3ow8_A 255 AFCPD 259 (321)
T ss_dssp EECTT
T ss_pred EECCC
Confidence 99874
No 5
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.85 E-value=6.6e-20 Score=94.77 Aligned_cols=82 Identities=26% Similarity=0.304 Sum_probs=76.8
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEEE
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSLA 81 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~ 81 (85)
+++++++.|+.|++||+++++....+.. |...+..+.|+|++..+++++.|+.|++||+.+++.+..+..+...+.+++
T Consensus 199 ~~l~s~s~D~~i~iWd~~~~~~~~~~~~-h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~ 277 (304)
T 2ynn_A 199 PYMITASDDLTIKIWDYQTKSCVATLEG-HMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIA 277 (304)
T ss_dssp CEEEEEETTSEEEEEETTTTEEEEEEEC-CSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCSSSSEEEEE
T ss_pred CEEEEEcCCCeEEEEeCCCCccceeeCC-CCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeeccCCCccEEEEE
Confidence 5799999999999999999999888887 888899999999999999999999999999999999999998999999999
Q ss_pred EeC
Q psy7058 82 FCD 84 (85)
Q Consensus 82 ~~~ 84 (85)
|+|
T Consensus 278 ~~~ 280 (304)
T 2ynn_A 278 THP 280 (304)
T ss_dssp ECT
T ss_pred ECC
Confidence 887
No 6
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.85 E-value=2.5e-20 Score=98.03 Aligned_cols=82 Identities=16% Similarity=0.183 Sum_probs=71.2
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCC-CEEEEEcCCCeEEEEEcCCccccccccccccceeEE
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDS-KFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSL 80 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~ 80 (85)
+++++++.|+.|++||+++++.+..+.. |...|.+++|+|++ .++++++.|+.|++||+..++.. .+.+|.+.|+++
T Consensus 228 ~~l~sg~~dg~v~~wd~~~~~~~~~~~~-h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~-~~~~H~~~V~~v 305 (344)
T 4gqb_B 228 EVFVFGDENGTVSLVDTKSTSCVLSSAV-HSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELF-RSQAHRDFVRDA 305 (344)
T ss_dssp TEEEEEETTSEEEEEESCC--CCEEEEC-CSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEE-EECCCSSCEEEE
T ss_pred cceEEeccCCcEEEEECCCCcEEEEEcC-CCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEE-EEcCCCCCEEEE
Confidence 4688999999999999999999888887 88889999999987 57899999999999999887654 567899999999
Q ss_pred EEeCC
Q psy7058 81 AFCDF 85 (85)
Q Consensus 81 ~~~~~ 85 (85)
+|+|.
T Consensus 306 ~~sp~ 310 (344)
T 4gqb_B 306 TWSPL 310 (344)
T ss_dssp EECSS
T ss_pred EEeCC
Confidence 99973
No 7
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.85 E-value=3.1e-20 Score=97.63 Aligned_cols=84 Identities=13% Similarity=0.204 Sum_probs=74.4
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeee---ccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCcccccccccccccee
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELG---TANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAIT 78 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~ 78 (85)
+.+++++.|+.|++||+.+++...... .+|...|.+++|+|+++++++++.|+.|++||+.+++.+..+.+|...|+
T Consensus 94 ~~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~ 173 (344)
T 4gqb_B 94 RGILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVT 173 (344)
T ss_dssp TEEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEE
T ss_pred CeEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceE
Confidence 468899999999999999876554332 24788899999999999999999999999999999999999999999999
Q ss_pred EEEEeCC
Q psy7058 79 SLAFCDF 85 (85)
Q Consensus 79 ~~~~~~~ 85 (85)
+++|+|.
T Consensus 174 ~~~~~~~ 180 (344)
T 4gqb_B 174 CVAASPH 180 (344)
T ss_dssp EEEECSS
T ss_pred EEEecCC
Confidence 9999873
No 8
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.85 E-value=3.5e-20 Score=99.03 Aligned_cols=84 Identities=24% Similarity=0.426 Sum_probs=78.0
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEE
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSL 80 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~ 80 (85)
++++++++.|+.|++||+.+++....+.. |...|.+++|+|++.++++++.|+.|++||+...+++..+.+|...|.++
T Consensus 120 ~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~-h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~~v 198 (410)
T 1vyh_C 120 FSVMVSASEDATIKVWDYETGDFERTLKG-HTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSV 198 (410)
T ss_dssp SSEEEEEESSSCEEEEETTTCCCCEEECC-CSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEE
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEEec-cCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEEEE
Confidence 36799999999999999999988888877 88889999999999999999999999999999999999999999999999
Q ss_pred EEeCC
Q psy7058 81 AFCDF 85 (85)
Q Consensus 81 ~~~~~ 85 (85)
+|+|.
T Consensus 199 ~~~p~ 203 (410)
T 1vyh_C 199 SIMPN 203 (410)
T ss_dssp EECSS
T ss_pred EEeCC
Confidence 99873
No 9
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.84 E-value=1e-19 Score=95.25 Aligned_cols=84 Identities=30% Similarity=0.468 Sum_probs=73.6
Q ss_pred CceeEEeeCCCcEEEeeCCCc-------eeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCcccccccccc
Q psy7058 1 MGLLATTSADQTARIWNTEDF-------SLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGH 73 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 73 (85)
+++|++++.|+.|++||+.+. .+...+.+ |...|.+++|+|++.++++++.|+.|++||+++++.+..+.+|
T Consensus 39 ~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~-h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h 117 (343)
T 2xzm_R 39 SPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTG-HNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGH 117 (343)
T ss_dssp CCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECC-CSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECC
T ss_pred CCEEEEEcCCCEEEEEECCcCCcccccccccchhcc-CCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCC
Confidence 467999999999999998753 33344444 8888999999999999999999999999999999999999999
Q ss_pred ccceeEEEEeCC
Q psy7058 74 QKAITSLAFCDF 85 (85)
Q Consensus 74 ~~~v~~~~~~~~ 85 (85)
...|.+++|+|.
T Consensus 118 ~~~v~~v~~sp~ 129 (343)
T 2xzm_R 118 QSEVYSVAFSPD 129 (343)
T ss_dssp CSCEEEEEECSS
T ss_pred CCcEEEEEECCC
Confidence 999999999974
No 10
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.84 E-value=1e-19 Score=95.24 Aligned_cols=85 Identities=16% Similarity=0.148 Sum_probs=74.6
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCcccc-ccccc-ccccee
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVD-KEYSG-HQKAIT 78 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~-~~~~v~ 78 (85)
++++++++.|+.+++||+.+++........+...+.+++|+|++.++++++.|+.|++||+++++.. ..+.. |..+|.
T Consensus 139 ~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~ 218 (343)
T 3lrv_A 139 TEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIK 218 (343)
T ss_dssp CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEE
T ss_pred CCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEE
Confidence 4678999999999999999988866554445557999999999999999999999999999999877 67887 999999
Q ss_pred EEEEeCC
Q psy7058 79 SLAFCDF 85 (85)
Q Consensus 79 ~~~~~~~ 85 (85)
+++|+|.
T Consensus 219 ~l~fs~~ 225 (343)
T 3lrv_A 219 EVKFADN 225 (343)
T ss_dssp EEEECTT
T ss_pred EEEEeCC
Confidence 9999984
No 11
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.83 E-value=3.3e-19 Score=93.31 Aligned_cols=83 Identities=20% Similarity=0.472 Sum_probs=76.8
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEEE
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSLA 81 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~ 81 (85)
+.+++++.|+.+++||+.+++....+.. |...+.++.|+|++.++++++.|+.|++||++++.....+.+|...|++++
T Consensus 155 ~~l~s~s~d~~i~~wd~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~ 233 (340)
T 1got_B 155 NQIVTSSGDTTCALWDIETGQQTTTFTG-HTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAIC 233 (340)
T ss_dssp TEEEEEETTSCEEEEETTTTEEEEEECC-CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEE
T ss_pred CcEEEEECCCcEEEEECCCCcEEEEEcC-CCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEE
Confidence 3588999999999999999998888876 888899999999999999999999999999999999999999999999999
Q ss_pred EeCC
Q psy7058 82 FCDF 85 (85)
Q Consensus 82 ~~~~ 85 (85)
|+|.
T Consensus 234 ~~p~ 237 (340)
T 1got_B 234 FFPN 237 (340)
T ss_dssp ECTT
T ss_pred EcCC
Confidence 9884
No 12
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.83 E-value=2.6e-19 Score=93.11 Aligned_cols=83 Identities=30% Similarity=0.464 Sum_probs=73.3
Q ss_pred ceeEEeeCCCcEEEeeCCCc-----eeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccc
Q psy7058 2 GLLATTSADQTARIWNTEDF-----SLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKA 76 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 76 (85)
++|++++.|+.+++||+... .+...+.+ |...+.++.|+|++.++++++.|+.|++||+.+++.+..+.+|...
T Consensus 31 ~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~-h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~ 109 (319)
T 3frx_A 31 NLLLSASRDKTLISWKLTGDDQKFGVPVRSFKG-HSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSD 109 (319)
T ss_dssp TEEEEEETTSEEEEEEEEEETTEEEEEEEEEEC-CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSC
T ss_pred cEEEEecCCccEEEecCCCCCccccccceEEeC-CcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCc
Confidence 57999999999999998642 33445555 8888999999999999999999999999999999999999999999
Q ss_pred eeEEEEeCC
Q psy7058 77 ITSLAFCDF 85 (85)
Q Consensus 77 v~~~~~~~~ 85 (85)
|.+++|+|.
T Consensus 110 v~~~~~~~~ 118 (319)
T 3frx_A 110 VMSVDIDKK 118 (319)
T ss_dssp EEEEEECTT
T ss_pred EEEEEEcCC
Confidence 999999873
No 13
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.82 E-value=7.1e-19 Score=90.87 Aligned_cols=84 Identities=26% Similarity=0.453 Sum_probs=77.1
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEE
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSL 80 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~ 80 (85)
|+++++++.|+.+++|+..+++....+.. +...+.+++|+|++.++++++.|+.|++||+.+++.+..+.+|...|.++
T Consensus 35 ~~~l~s~~~dg~i~iw~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~ 113 (312)
T 4ery_A 35 GEWLASSSADKLIKIWGAYDGKFEKTISG-HKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCC 113 (312)
T ss_dssp SSEEEEEETTSCEEEEETTTCCEEEEECC-CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEE
T ss_pred CCEEEEeeCCCeEEEEeCCCcccchhhcc-CCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEEcCCCCCEEEE
Confidence 46899999999999999998888777766 77889999999999999999999999999999999999999999999999
Q ss_pred EEeCC
Q psy7058 81 AFCDF 85 (85)
Q Consensus 81 ~~~~~ 85 (85)
+|+|.
T Consensus 114 ~~~~~ 118 (312)
T 4ery_A 114 NFNPQ 118 (312)
T ss_dssp EECSS
T ss_pred EEcCC
Confidence 99873
No 14
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.82 E-value=3.7e-19 Score=97.66 Aligned_cols=82 Identities=29% Similarity=0.560 Sum_probs=73.9
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEE
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSL 80 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~ 80 (85)
|++|++++.|+.|++||. +++....+.+ |...|.+++|+|+++++++++.|+.|++||. +++.+..+.+|...|.++
T Consensus 28 g~~las~~~d~~v~iWd~-~~~~~~~l~g-h~~~V~~l~fspdg~~las~~~d~~i~vWd~-~~~~~~~~~~~~~~v~~~ 104 (577)
T 2ymu_A 28 GQTIASASDDKTVKLWNR-NGQLLQTLTG-HSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGV 104 (577)
T ss_dssp SSCEEEEETTSEEEEECT-TSCEEEEEEC-CSSCEEEEEECTTSSEEEEEETTSCEEEEET-TSCEEEEECCCSSCEEEE
T ss_pred CCEEEEEeCCCEEEEEEC-CCCEEEEEeC-CCCCEEEEEECCCCCEEEEEeCCCEEEEEEC-CCCEEEEEECCCCCEEEE
Confidence 578999999999999995 6778888877 8889999999999999999999999999996 577788899999999999
Q ss_pred EEeCC
Q psy7058 81 AFCDF 85 (85)
Q Consensus 81 ~~~~~ 85 (85)
+|+|.
T Consensus 105 ~~s~d 109 (577)
T 2ymu_A 105 AFSPD 109 (577)
T ss_dssp EECTT
T ss_pred EECCC
Confidence 99874
No 15
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.82 E-value=8.8e-19 Score=90.52 Aligned_cols=84 Identities=24% Similarity=0.495 Sum_probs=77.5
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEE
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSL 80 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~ 80 (85)
++++++++.|+.+++||+.+++....+.. +...+.++.|+|++.++++++.|+.|++||+++++.+..+..|..+|.++
T Consensus 77 ~~~l~s~~~d~~i~vwd~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~ 155 (312)
T 4ery_A 77 SNLLVSASDDKTLKIWDVSSGKCLKTLKG-HSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAV 155 (312)
T ss_dssp SSEEEEEETTSEEEEEETTTCCEEEEEEC-CSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEE
T ss_pred CCEEEEECCCCEEEEEECCCCcEEEEEcC-CCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEE
Confidence 46899999999999999999988888876 77889999999999999999999999999999999888899999999999
Q ss_pred EEeCC
Q psy7058 81 AFCDF 85 (85)
Q Consensus 81 ~~~~~ 85 (85)
+|+|.
T Consensus 156 ~~~~~ 160 (312)
T 4ery_A 156 HFNRD 160 (312)
T ss_dssp EECTT
T ss_pred EEcCC
Confidence 99873
No 16
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.82 E-value=7.8e-19 Score=93.39 Aligned_cols=84 Identities=14% Similarity=0.222 Sum_probs=76.6
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEE
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSL 80 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~ 80 (85)
|++|++++.|+.+++||+.+++....+.. |...+.+++|+|++.++++++.|+.|++||+.+++....+.+|...|.++
T Consensus 109 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~ 187 (420)
T 3vl1_A 109 MRRFILGTTEGDIKVLDSNFNLQREIDQA-HVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDI 187 (420)
T ss_dssp SCEEEEEETTSCEEEECTTSCEEEEETTS-SSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEE
T ss_pred CCEEEEEECCCCEEEEeCCCcceeeeccc-ccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEE
Confidence 46899999999999999998887766555 88889999999999999999999999999999999999999999999999
Q ss_pred EEeCC
Q psy7058 81 AFCDF 85 (85)
Q Consensus 81 ~~~~~ 85 (85)
+|+|.
T Consensus 188 ~~~~~ 192 (420)
T 3vl1_A 188 AIIDR 192 (420)
T ss_dssp EEETT
T ss_pred EEcCC
Confidence 99873
No 17
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.82 E-value=3.7e-19 Score=93.79 Aligned_cols=81 Identities=16% Similarity=0.238 Sum_probs=72.1
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCC-CEEEEEcCCCeEEEEEcCCccccccccccccceeEE
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDS-KFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSL 80 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~ 80 (85)
.++++++.|+.|++||+++++....+.. +...+.+++|+|++ .++++++.|+.|++||+++++.+..+ +|...|+++
T Consensus 240 ~~la~g~~d~~i~~wd~~~~~~~~~~~~-~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~-~H~~~V~~v 317 (357)
T 4g56_B 240 DTFACGDETGNVSLVNIKNPDSAQTSAV-HSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDL-SHRDFVTGV 317 (357)
T ss_dssp TEEEEEESSSCEEEEESSCGGGCEEECC-CSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEEC-CCSSCEEEE
T ss_pred ceEEEeecccceeEEECCCCcEeEEEec-cceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC-CCCCCEEEE
Confidence 4688999999999999999988888876 77889999999987 57899999999999999988876655 699999999
Q ss_pred EEeC
Q psy7058 81 AFCD 84 (85)
Q Consensus 81 ~~~~ 84 (85)
+|+|
T Consensus 318 afsP 321 (357)
T 4g56_B 318 AWSP 321 (357)
T ss_dssp EECS
T ss_pred EEeC
Confidence 9997
No 18
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.82 E-value=1.3e-18 Score=91.67 Aligned_cols=83 Identities=17% Similarity=0.337 Sum_probs=75.8
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecC--CCCEEEEEcCCCeEEEEEcCCccccccccccccceeE
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTL--DSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITS 79 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~ 79 (85)
+.+++++.|+.+++||+.+++....+.. |...+.++.++| ++..+++++.|+.|++||+++++++..+..|...|++
T Consensus 167 ~~l~t~s~D~~v~lwd~~~~~~~~~~~~-h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~ 245 (354)
T 2pbi_B 167 MQILTASGDGTCALWDVESGQLLQSFHG-HGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNS 245 (354)
T ss_dssp SEEEEEETTSEEEEEETTTCCEEEEEEC-CSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEE
T ss_pred CEEEEEeCCCcEEEEeCCCCeEEEEEcC-CCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEE
Confidence 4789999999999999999998888877 778899999987 5789999999999999999999999999999999999
Q ss_pred EEEeCC
Q psy7058 80 LAFCDF 85 (85)
Q Consensus 80 ~~~~~~ 85 (85)
++|+|.
T Consensus 246 v~~~p~ 251 (354)
T 2pbi_B 246 VRYYPS 251 (354)
T ss_dssp EEECTT
T ss_pred EEEeCC
Confidence 999873
No 19
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.82 E-value=1.5e-18 Score=90.85 Aligned_cols=85 Identities=18% Similarity=0.238 Sum_probs=74.9
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeecc-CCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeE
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTA-NQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITS 79 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~ 79 (85)
|+++++++.|+.+++||+++++....+... ....+.+++|+|++.++++++.|+.|++||+.+++....+.+|...|.+
T Consensus 238 ~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~ 317 (340)
T 1got_B 238 GNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSC 317 (340)
T ss_dssp SSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEE
T ss_pred CCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccCcEeeEeecCCCcEEE
Confidence 467999999999999999988777665431 3346999999999999999999999999999999988899999999999
Q ss_pred EEEeCC
Q psy7058 80 LAFCDF 85 (85)
Q Consensus 80 ~~~~~~ 85 (85)
++|+|.
T Consensus 318 ~~~s~d 323 (340)
T 1got_B 318 LGVTDD 323 (340)
T ss_dssp EEECTT
T ss_pred EEEcCC
Confidence 999874
No 20
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.81 E-value=1.9e-18 Score=89.84 Aligned_cols=82 Identities=16% Similarity=0.307 Sum_probs=74.0
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEE
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSL 80 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~ 80 (85)
|+++++++.|+.|++||+.+++....+.. |...+.++.|+|++..+++++.|+.|++||++ ++.+..+.+|...|.++
T Consensus 77 g~~l~s~s~D~~v~~wd~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~-~~~~~~~~~h~~~v~~~ 154 (319)
T 3frx_A 77 GAYALSASWDKTLRLWDVATGETYQRFVG-HKSDVMSVDIDKKASMIISGSRDKTIKVWTIK-GQCLATLLGHNDWVSQV 154 (319)
T ss_dssp SSEEEEEETTSEEEEEETTTTEEEEEEEC-CSSCEEEEEECTTSCEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEE
T ss_pred CCEEEEEeCCCEEEEEECCCCCeeEEEcc-CCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC-CCeEEEEeccCCcEEEE
Confidence 46899999999999999999998888877 88889999999999999999999999999996 45667778899999999
Q ss_pred EEeC
Q psy7058 81 AFCD 84 (85)
Q Consensus 81 ~~~~ 84 (85)
+|+|
T Consensus 155 ~~~~ 158 (319)
T 3frx_A 155 RVVP 158 (319)
T ss_dssp EECC
T ss_pred EEcc
Confidence 9876
No 21
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.80 E-value=1.6e-18 Score=90.96 Aligned_cols=85 Identities=29% Similarity=0.439 Sum_probs=71.8
Q ss_pred CceeEEeeCCCcEEEeeCCCceeee--eeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCc--cccccccccccc
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVR--ELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETG--EVDKEYSGHQKA 76 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~ 76 (85)
|++|++++.|+.|++||+.++.... .+...|...|.+++|+|++.++++++.|+.+++|++... +....+.+|...
T Consensus 28 g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~ 107 (345)
T 3fm0_A 28 GTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENE 107 (345)
T ss_dssp SSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSC
T ss_pred CCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCC
Confidence 5689999999999999998765432 222347888999999999999999999999999998766 456778899999
Q ss_pred eeEEEEeCC
Q psy7058 77 ITSLAFCDF 85 (85)
Q Consensus 77 v~~~~~~~~ 85 (85)
|.+++|+|.
T Consensus 108 v~~v~~sp~ 116 (345)
T 3fm0_A 108 VKSVAWAPS 116 (345)
T ss_dssp EEEEEECTT
T ss_pred ceEEEEeCC
Confidence 999999984
No 22
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.80 E-value=2.5e-18 Score=89.78 Aligned_cols=84 Identities=24% Similarity=0.309 Sum_probs=71.2
Q ss_pred CceeEEeeCCCcEEEeeCCCc----eeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCc--cccccccccc
Q psy7058 1 MGLLATTSADQTARIWNTEDF----SLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETG--EVDKEYSGHQ 74 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~~ 74 (85)
|++|++++.|+.+++||+... +....+.. |...+.++.|+|++.++++++.|+.|++|+...+ +++..+.+|.
T Consensus 119 g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~-h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~ 197 (330)
T 2hes_X 119 GYYLATCSRDKSVWIWETDESGEEYECISVLQE-HSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHE 197 (330)
T ss_dssp SCEEEEEETTSCEEEEECCTTCCCCEEEEEECC-CSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCS
T ss_pred CCEEEEEeCCCEEEEEeccCCCCCeEEEEEecc-CCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCC
Confidence 468999999999999999532 33444544 7788999999999999999999999999998765 5677888999
Q ss_pred cceeEEEEeCC
Q psy7058 75 KAITSLAFCDF 85 (85)
Q Consensus 75 ~~v~~~~~~~~ 85 (85)
..|.+++|+|.
T Consensus 198 ~~v~~~~~~~~ 208 (330)
T 2hes_X 198 GTVWSSDFDKT 208 (330)
T ss_dssp SCEEEEEECCS
T ss_pred CcEEEEEecCC
Confidence 99999999873
No 23
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.80 E-value=3.3e-18 Score=89.32 Aligned_cols=84 Identities=25% Similarity=0.374 Sum_probs=76.0
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecC-CCCEEEEEcCCCeEEEEEcCCccccccc---cccccc
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTL-DSKFLLTASSDGVARLWNIETGEVDKEY---SGHQKA 76 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~---~~~~~~ 76 (85)
|++|++++.|+.|++||+.+++....+.. +...+.+++|+| ++..+++++.|+.|++||+++++....+ ..|...
T Consensus 85 ~~~l~~~~~dg~i~v~d~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 163 (366)
T 3k26_A 85 HPLLAVAGSRGIIRIINPITMQCIKHYVG-HGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDE 163 (366)
T ss_dssp CEEEEEEETTCEEEEECTTTCCEEEEEES-CCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSC
T ss_pred CCEEEEecCCCEEEEEEchhceEeeeecC-CCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCc
Confidence 35799999999999999999988888876 788899999999 8999999999999999999998887777 679999
Q ss_pred eeEEEEeCC
Q psy7058 77 ITSLAFCDF 85 (85)
Q Consensus 77 v~~~~~~~~ 85 (85)
|.+++|+|.
T Consensus 164 v~~~~~~~~ 172 (366)
T 3k26_A 164 VLSADYDLL 172 (366)
T ss_dssp EEEEEECTT
T ss_pred eeEEEECCC
Confidence 999999873
No 24
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.80 E-value=1.2e-18 Score=92.17 Aligned_cols=64 Identities=14% Similarity=0.203 Sum_probs=58.6
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCc
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETG 64 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 64 (85)
|++|++|+.|+.|++||+.+++++..+...|...|++++|+|+++++++++.|++|+||+++..
T Consensus 281 g~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 281 GELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp SCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCTT
T ss_pred CCceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence 5789999999999999999999988875558899999999999999999999999999999644
No 25
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.80 E-value=3.2e-18 Score=88.25 Aligned_cols=83 Identities=24% Similarity=0.361 Sum_probs=70.3
Q ss_pred CceeEEeeCCCcEEEeeCCCc--eeeeeeeccCCCcEEEEEecC--CCCEEEEEcCCCeEEEEEcCCcc--ccccccccc
Q psy7058 1 MGLLATTSADQTARIWNTEDF--SLVRELGTANQRWVWDAAFTL--DSKFLLTASSDGVARLWNIETGE--VDKEYSGHQ 74 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~--~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~ 74 (85)
|++|++++.|+.|++||+.+. +....+.+ |...|.+++|++ ++..+++++.|+.|++||+.+++ .+..+..|.
T Consensus 21 g~~las~s~D~~v~iw~~~~~~~~~~~~l~g-H~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~ 99 (297)
T 2pm7_B 21 GKRMATCSSDKTIKIFEVEGETHKLIDTLTG-HEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQIAVHAVHS 99 (297)
T ss_dssp SSEEEEEETTSCEEEEEBCSSCBCCCEEECC-CSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCEEECCCS
T ss_pred CCEEEEEeCCCEEEEEecCCCCcEEEEEEcc-ccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEEEeecCC
Confidence 578999999999999998743 45566665 888999999986 38999999999999999998764 455677789
Q ss_pred cceeEEEEeC
Q psy7058 75 KAITSLAFCD 84 (85)
Q Consensus 75 ~~v~~~~~~~ 84 (85)
..|.+++|+|
T Consensus 100 ~~v~~v~~~p 109 (297)
T 2pm7_B 100 ASVNSVQWAP 109 (297)
T ss_dssp SCEEEEEECC
T ss_pred CceeEEEeCc
Confidence 9999999987
No 26
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.80 E-value=4.6e-18 Score=88.77 Aligned_cols=84 Identities=24% Similarity=0.379 Sum_probs=65.6
Q ss_pred CceeEEeeCCCcEEEeeCCC-------ceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCc----ccccc
Q psy7058 1 MGLLATTSADQTARIWNTED-------FSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETG----EVDKE 69 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~----~~~~~ 69 (85)
+++|++++.|+.|++||... .+....+.. |...|.+++|+|++.++++++.|+.|++||+... +++..
T Consensus 70 ~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~-h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~ 148 (330)
T 2hes_X 70 TSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEG-HENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISV 148 (330)
T ss_dssp SSEEEEEETTSCEEEEEC-------CCCEEEEEEC-----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEE
T ss_pred CCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcC-CCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEE
Confidence 46799999999999999853 233444444 7888999999999999999999999999999532 45567
Q ss_pred ccccccceeEEEEeCC
Q psy7058 70 YSGHQKAITSLAFCDF 85 (85)
Q Consensus 70 ~~~~~~~v~~~~~~~~ 85 (85)
+.+|...|.+++|+|.
T Consensus 149 ~~~h~~~v~~v~~~p~ 164 (330)
T 2hes_X 149 LQEHSQDVKHVIWHPS 164 (330)
T ss_dssp ECCCSSCEEEEEECSS
T ss_pred eccCCCceEEEEECCC
Confidence 7889999999999884
No 27
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.80 E-value=1.2e-18 Score=90.53 Aligned_cols=84 Identities=25% Similarity=0.444 Sum_probs=70.7
Q ss_pred CceeEEeeCCCcEEEeeCCCce--eeeeeeccCCCcEEEEEecC--CCCEEEEEcCCCeEEEEEcCCcc--ccccccccc
Q psy7058 1 MGLLATTSADQTARIWNTEDFS--LVRELGTANQRWVWDAAFTL--DSKFLLTASSDGVARLWNIETGE--VDKEYSGHQ 74 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~--~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~ 74 (85)
|++|++++.|+.+++||+.++. ....+.+ |...|.+++|++ ++..+++++.|+.|++||++++. ....+.+|.
T Consensus 25 g~~lasgs~D~~v~lwd~~~~~~~~~~~l~g-H~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~ 103 (316)
T 3bg1_A 25 GTRLATCSSDRSVKIFDVRNGGQILIADLRG-HEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHAGHD 103 (316)
T ss_dssp GCEEEEEETTTEEEEEEEETTEEEEEEEEEC-CSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEEECCCS
T ss_pred CCEEEEEeCCCeEEEEEecCCCcEEEEEEcC-CCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEEccCCC
Confidence 4689999999999999998764 3445555 888999999986 48999999999999999998763 455677899
Q ss_pred cceeEEEEeCC
Q psy7058 75 KAITSLAFCDF 85 (85)
Q Consensus 75 ~~v~~~~~~~~ 85 (85)
..|++++|+|.
T Consensus 104 ~~V~~v~~~p~ 114 (316)
T 3bg1_A 104 SSVNSVCWAPH 114 (316)
T ss_dssp SCCCEEEECCT
T ss_pred CceEEEEECCC
Confidence 99999999873
No 28
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.79 E-value=6.4e-18 Score=90.42 Aligned_cols=82 Identities=16% Similarity=0.398 Sum_probs=71.6
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeec-cCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEE
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGT-ANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSL 80 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~ 80 (85)
+.|++| .|++|++||+.+++....+.. .+...|++++|+|+|.++++|+.|+.|++||+.+++.+..+.+|...+.++
T Consensus 117 n~lAvg-ld~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~ 195 (420)
T 4gga_A 117 NVLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSL 195 (420)
T ss_dssp SEEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEE
T ss_pred CEEEEE-eCCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEE
Confidence 445554 599999999999988776654 356789999999999999999999999999999999999999999999999
Q ss_pred EEeC
Q psy7058 81 AFCD 84 (85)
Q Consensus 81 ~~~~ 84 (85)
++++
T Consensus 196 s~~~ 199 (420)
T 4gga_A 196 SWNS 199 (420)
T ss_dssp EEET
T ss_pred eeCC
Confidence 8875
No 29
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.79 E-value=4.7e-18 Score=94.51 Aligned_cols=82 Identities=18% Similarity=0.358 Sum_probs=73.9
Q ss_pred eeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCcccccccc-------cccc
Q psy7058 3 LLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYS-------GHQK 75 (85)
Q Consensus 3 ~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-------~~~~ 75 (85)
.|++++.|+.+++||..+++....+.. |...|.+++|+|++.++++++.|+.|++||+.+++....+. +|..
T Consensus 162 ~l~s~s~D~~v~lwd~~~~~~~~~l~~-H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~ 240 (611)
T 1nr0_A 162 RIISGSDDNTVAIFEGPPFKFKSTFGE-HTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSG 240 (611)
T ss_dssp EEEEEETTSCEEEEETTTBEEEEEECC-CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSS
T ss_pred EEEEEeCCCeEEEEECCCCeEeeeecc-ccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCC
Confidence 589999999999999998888777766 88899999999999999999999999999999888776663 6999
Q ss_pred ceeEEEEeCC
Q psy7058 76 AITSLAFCDF 85 (85)
Q Consensus 76 ~v~~~~~~~~ 85 (85)
.|.+++|+|.
T Consensus 241 ~V~~v~~spd 250 (611)
T 1nr0_A 241 SVFGLTWSPD 250 (611)
T ss_dssp CEEEEEECTT
T ss_pred CEEEEEECCC
Confidence 9999999984
No 30
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.79 E-value=8.1e-18 Score=88.13 Aligned_cols=83 Identities=22% Similarity=0.345 Sum_probs=70.5
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCcccc--cccccccccee
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVD--KEYSGHQKAIT 78 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~~~~~~~~~v~ 78 (85)
+.++++++.|+.+++||+.+++....+.. |...+.+++|+|++..+++++.|+.|++||+...... .....|...|.
T Consensus 88 ~~~l~s~s~D~~v~lwd~~~~~~~~~~~~-h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~ 166 (343)
T 2xzm_R 88 NCFAISSSWDKTLRLWDLRTGTTYKRFVG-HQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVS 166 (343)
T ss_dssp TTEEEEEETTSEEEEEETTSSCEEEEEEC-CCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEE
T ss_pred CCEEEEEcCCCcEEEEECCCCcEEEEEcC-CCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeecccCCCceee
Confidence 35789999999999999999988888877 8888999999999999999999999999999743322 12236788899
Q ss_pred EEEEeC
Q psy7058 79 SLAFCD 84 (85)
Q Consensus 79 ~~~~~~ 84 (85)
+++|+|
T Consensus 167 ~~~~~~ 172 (343)
T 2xzm_R 167 CVRYSP 172 (343)
T ss_dssp EEEECC
T ss_pred eeeecc
Confidence 999987
No 31
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.79 E-value=6.4e-18 Score=94.91 Aligned_cols=83 Identities=28% Similarity=0.514 Sum_probs=73.0
Q ss_pred ceeEEeeCCCcEEEeeCCCc-----eeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccc
Q psy7058 2 GLLATTSADQTARIWNTEDF-----SLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKA 76 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 76 (85)
++|++++.|+.|++||+.+. .....+.. |...|.+++|+|++.++++++.|+.|++||+.+++....+.+|...
T Consensus 396 ~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~-h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~ 474 (694)
T 3dm0_A 396 DIIVSASRDKSIILWKLTKDDKAYGVAQRRLTG-HSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKD 474 (694)
T ss_dssp SEEEEEETTSEEEEEECCCSTTCSCEEEEEEEC-CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSC
T ss_pred CEEEEEeCCCcEEEEEccCCCcccccccceecC-CCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCC
Confidence 57899999999999998753 23344444 8888999999999999999999999999999999999999999999
Q ss_pred eeEEEEeCC
Q psy7058 77 ITSLAFCDF 85 (85)
Q Consensus 77 v~~~~~~~~ 85 (85)
|.+++|+|.
T Consensus 475 v~~~~~s~~ 483 (694)
T 3dm0_A 475 VLSVAFSLD 483 (694)
T ss_dssp EEEEEECTT
T ss_pred EEEEEEeCC
Confidence 999999874
No 32
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.79 E-value=8.5e-18 Score=88.52 Aligned_cols=85 Identities=18% Similarity=0.233 Sum_probs=74.1
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeecc-CCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeE
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTA-NQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITS 79 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~ 79 (85)
|+++++++.|+.+++||+++......+... ....+.++.|+|++.++++++.|+.|++||+.+++.+..+.+|...|.+
T Consensus 252 ~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~ 331 (354)
T 2pbi_B 252 GDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVST 331 (354)
T ss_dssp SSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEE
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCceEEEEECCCCcEEE
Confidence 467999999999999999988776655431 2346899999999999999999999999999999988889999999999
Q ss_pred EEEeCC
Q psy7058 80 LAFCDF 85 (85)
Q Consensus 80 ~~~~~~ 85 (85)
++|+|.
T Consensus 332 l~~spd 337 (354)
T 2pbi_B 332 LRVSPD 337 (354)
T ss_dssp EEECTT
T ss_pred EEECCC
Confidence 999984
No 33
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.79 E-value=4.1e-18 Score=93.54 Aligned_cols=82 Identities=28% Similarity=0.482 Sum_probs=73.3
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEE
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSL 80 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~ 80 (85)
|++|++++.|+.|++||. +++....+.. |...|++++|+|+++++++++.|+.|++||. +++.+..+.+|...|.++
T Consensus 479 ~~~las~~~d~~i~iw~~-~~~~~~~~~~-h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~-~~~~~~~~~~h~~~v~~~ 555 (577)
T 2ymu_A 479 GQTIASASDDKTVKLWNR-NGQLLQTLTG-HSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGV 555 (577)
T ss_dssp SCEEEEEETTSEEEEEET-TSCEEEEEEC-CSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEE
T ss_pred CCEEEEEeCCCEEEEEcC-CCCEEEEEeC-CCCCEEEEEEcCCCCEEEEEECcCEEEEEeC-CCCEEEEEcCCCCCEEEE
Confidence 468999999999999995 5777777776 8888999999999999999999999999996 677888899999999999
Q ss_pred EEeCC
Q psy7058 81 AFCDF 85 (85)
Q Consensus 81 ~~~~~ 85 (85)
+|+|.
T Consensus 556 ~fs~d 560 (577)
T 2ymu_A 556 AFSPD 560 (577)
T ss_dssp EECTT
T ss_pred EEcCC
Confidence 99974
No 34
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.79 E-value=6.6e-18 Score=89.80 Aligned_cols=84 Identities=25% Similarity=0.328 Sum_probs=74.1
Q ss_pred CceeEEeeCCCcEEEeeCCCc-------eeeeeeeccCCCcEEEEEecCCC-CEEEEEcCCCeEEEEEcCCccccccc--
Q psy7058 1 MGLLATTSADQTARIWNTEDF-------SLVRELGTANQRWVWDAAFTLDS-KFLLTASSDGVARLWNIETGEVDKEY-- 70 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~-------~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~-- 70 (85)
+++|++++.|+.|++||+.++ ++...+.. |...+.+++|+|++ ..+++++.|+.|++||+.+++....+
T Consensus 94 ~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~-h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 172 (402)
T 2aq5_A 94 DNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEG-HTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGP 172 (402)
T ss_dssp TTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEEC-CSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECT
T ss_pred CCEEEEEeCCCeEEEEEccCCCCccccCCceEEecC-CCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEec
Confidence 468999999999999999887 45556655 78889999999998 69999999999999999999988888
Q ss_pred cccccceeEEEEeCC
Q psy7058 71 SGHQKAITSLAFCDF 85 (85)
Q Consensus 71 ~~~~~~v~~~~~~~~ 85 (85)
..|...|.+++|+|.
T Consensus 173 ~~~~~~v~~~~~~~~ 187 (402)
T 2aq5_A 173 DVHPDTIYSVDWSRD 187 (402)
T ss_dssp TTCCSCEEEEEECTT
T ss_pred CCCCCceEEEEECCC
Confidence 789999999999873
No 35
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.78 E-value=8.5e-18 Score=88.20 Aligned_cols=84 Identities=20% Similarity=0.317 Sum_probs=70.7
Q ss_pred CceeEEeeCCCcEEEeeCCCce--eeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCcc---cccccccccc
Q psy7058 1 MGLLATTSADQTARIWNTEDFS--LVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGE---VDKEYSGHQK 75 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---~~~~~~~~~~ 75 (85)
|++|++++.|+.+++||..... ....+.. |...|.+++|+|++.++++++.|+.|++||+.... .+..+..|..
T Consensus 73 g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~-h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~ 151 (345)
T 3fm0_A 73 GNYLASASFDATTCIWKKNQDDFECVTTLEG-HENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQ 151 (345)
T ss_dssp SSEEEEEETTSCEEEEEECCC-EEEEEEECC-CSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCS
T ss_pred CCEEEEEECCCcEEEEEccCCCeEEEEEccC-CCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCC
Confidence 4689999999999999987653 3455555 88889999999999999999999999999997653 3456778999
Q ss_pred ceeEEEEeCC
Q psy7058 76 AITSLAFCDF 85 (85)
Q Consensus 76 ~v~~~~~~~~ 85 (85)
.|.+++|+|.
T Consensus 152 ~v~~~~~~p~ 161 (345)
T 3fm0_A 152 DVKHVVWHPS 161 (345)
T ss_dssp CEEEEEECSS
T ss_pred CeEEEEECCC
Confidence 9999999874
No 36
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.78 E-value=1.4e-18 Score=92.51 Aligned_cols=84 Identities=14% Similarity=0.153 Sum_probs=71.6
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeee----eccCCCcEEEEEecC--------CCCEEEEEcCCCeEEEEEcCCcccccc
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVREL----GTANQRWVWDAAFTL--------DSKFLLTASSDGVARLWNIETGEVDKE 69 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~----~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~i~~~~~~~~~~~~~ 69 (85)
.++++++.|+++++||+.+++..... ..+|...|++++|+| +++++++++.|++|++||+.++.+...
T Consensus 102 ~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~ 181 (393)
T 4gq1_A 102 LFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILA 181 (393)
T ss_dssp EEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEE
T ss_pred CEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeee
Confidence 46899999999999999887654321 124888999999987 789999999999999999998888888
Q ss_pred ccccccceeEEEEeCC
Q psy7058 70 YSGHQKAITSLAFCDF 85 (85)
Q Consensus 70 ~~~~~~~v~~~~~~~~ 85 (85)
+..|...+.+++|+|.
T Consensus 182 ~~~~~~~v~~v~~~p~ 197 (393)
T 4gq1_A 182 GYPLSSPGISVQFRPS 197 (393)
T ss_dssp EEECSSCEEEEEEETT
T ss_pred ecCCCCCcEEEEECCC
Confidence 8889999999999984
No 37
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.78 E-value=3.4e-18 Score=90.64 Aligned_cols=84 Identities=26% Similarity=0.366 Sum_probs=69.2
Q ss_pred CceeEEeeCCCcEEEeeCCC-ceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccc-----
Q psy7058 1 MGLLATTSADQTARIWNTED-FSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQ----- 74 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~----- 74 (85)
++++++++.|+.+++||++. .+....+.+ |...|.+++|+|++..+++++.|+.|++||+++++.+..+..+.
T Consensus 218 ~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~-h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~ 296 (380)
T 3iz6_a 218 ANMFISGSCDTTVRLWDLRITSRAVRTYHG-HEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDN 296 (380)
T ss_dssp CCEEEEEETTSCEEEEETTTTCCCCEEECC-CSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCC
T ss_pred CCEEEEEECCCeEEEEECCCCCcceEEECC-cCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEeccccccccc
Confidence 35789999999999999984 455556655 88889999999999999999999999999999988776665332
Q ss_pred --cceeEEEEeCC
Q psy7058 75 --KAITSLAFCDF 85 (85)
Q Consensus 75 --~~v~~~~~~~~ 85 (85)
..|.+++|+|.
T Consensus 297 ~~~~v~~~~~s~~ 309 (380)
T 3iz6_a 297 ELPIVTSVAFSIS 309 (380)
T ss_dssp SSCSCSEEEECSS
T ss_pred ccCceEEEEECCC
Confidence 24788999873
No 38
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.78 E-value=1.5e-17 Score=86.85 Aligned_cols=83 Identities=19% Similarity=0.380 Sum_probs=75.7
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEE
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSL 80 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~ 80 (85)
|++|++++.|+.|++||+.+++....+.. +...+.+++|+|++.++++++.|+.|++||+.+++....+. +...+.++
T Consensus 44 ~~~l~~~~~dg~i~vwd~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~ 121 (369)
T 3zwl_B 44 GDLLFSCSKDSSASVWYSLNGERLGTLDG-HTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATWK-SPVPVKRV 121 (369)
T ss_dssp SCEEEEEESSSCEEEEETTTCCEEEEECC-CSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEE-CSSCEEEE
T ss_pred CCEEEEEeCCCEEEEEeCCCchhhhhhhh-cCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEee-cCCCeEEE
Confidence 46899999999999999999998888876 78889999999999999999999999999999998888887 88899999
Q ss_pred EEeCC
Q psy7058 81 AFCDF 85 (85)
Q Consensus 81 ~~~~~ 85 (85)
+|+|.
T Consensus 122 ~~~~~ 126 (369)
T 3zwl_B 122 EFSPC 126 (369)
T ss_dssp EECTT
T ss_pred EEccC
Confidence 99873
No 39
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.78 E-value=1.3e-17 Score=88.72 Aligned_cols=82 Identities=24% Similarity=0.445 Sum_probs=73.0
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEE
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSL 80 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~ 80 (85)
|++|++++.|+.|++||+.+++....+.. |...+.+++|+|++..+++++.|+.|++||+++++....+. +...+.++
T Consensus 135 g~~l~s~~~d~~i~iwd~~~~~~~~~~~~-h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~-~~~~v~~~ 212 (393)
T 1erj_A 135 GKFLATGAEDRLIRIWDIENRKIVMILQG-HEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLS-IEDGVTTV 212 (393)
T ss_dssp SSEEEEEETTSCEEEEETTTTEEEEEECC-CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEE
T ss_pred CCEEEEEcCCCeEEEEECCCCcEEEEEcc-CCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEE-cCCCcEEE
Confidence 46899999999999999999988888776 88889999999999999999999999999999988776665 56778888
Q ss_pred EEeC
Q psy7058 81 AFCD 84 (85)
Q Consensus 81 ~~~~ 84 (85)
+|+|
T Consensus 213 ~~~~ 216 (393)
T 1erj_A 213 AVSP 216 (393)
T ss_dssp EECS
T ss_pred EEEC
Confidence 8876
No 40
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.78 E-value=9.2e-18 Score=92.43 Aligned_cols=85 Identities=8% Similarity=0.106 Sum_probs=77.2
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecC----------CCCEEEEEcCCCeEEEEEcCCc-ccccc
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTL----------DSKFLLTASSDGVARLWNIETG-EVDKE 69 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~i~~~~~~~~-~~~~~ 69 (85)
|++|++++.|+.+++||+.+++....+...+...+.+++|+| ++.++++++.|+.|++|++.++ +.+..
T Consensus 500 g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~ 579 (615)
T 1pgu_A 500 ETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKA 579 (615)
T ss_dssp SSEEEEEETTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEE
T ss_pred CCEEEEcCCCCeEEEeeCCCCcceeEeecCCCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCCceechh
Confidence 468999999999999999999988877655778899999999 9999999999999999999987 77788
Q ss_pred ccccccceeEEEEeCC
Q psy7058 70 YSGHQKAITSLAFCDF 85 (85)
Q Consensus 70 ~~~~~~~v~~~~~~~~ 85 (85)
+.+|...|.+++|+|.
T Consensus 580 ~~~h~~~v~~l~~s~~ 595 (615)
T 1pgu_A 580 LNAHKDGVNNLLWETP 595 (615)
T ss_dssp TTSSTTCEEEEEEEET
T ss_pred hhcCccceEEEEEcCC
Confidence 8999999999999974
No 41
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.78 E-value=1.2e-17 Score=89.99 Aligned_cols=82 Identities=20% Similarity=0.479 Sum_probs=75.8
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEE
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSL 80 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~ 80 (85)
++++++++.|+.|++||+.+++....+.. |...+.++.|++++ .+++++.|+.|++||+.+++....+.+|...|.++
T Consensus 132 ~~~l~sgs~dg~i~vwd~~~~~~~~~~~~-h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l 209 (464)
T 3v7d_B 132 DNYVITGADDKMIRVYDSINKKFLLQLSG-HDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCL 209 (464)
T ss_dssp TTEEEEEETTSCEEEEETTTTEEEEEECC-CSSCEEEEEECSTT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEE
T ss_pred CCEEEEEcCCCcEEEEECCCCcEEEEEeC-CCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEE
Confidence 46899999999999999999998888876 88899999999988 89999999999999999999999999999999999
Q ss_pred EEeC
Q psy7058 81 AFCD 84 (85)
Q Consensus 81 ~~~~ 84 (85)
+|++
T Consensus 210 ~~~~ 213 (464)
T 3v7d_B 210 DIVE 213 (464)
T ss_dssp EEEE
T ss_pred EEec
Confidence 9974
No 42
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.78 E-value=5.3e-18 Score=89.42 Aligned_cols=82 Identities=15% Similarity=0.251 Sum_probs=65.5
Q ss_pred eeEEeeCCCcEEEeeCCCceeeeeee---ccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeE
Q psy7058 3 LLATTSADQTARIWNTEDFSLVRELG---TANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITS 79 (85)
Q Consensus 3 ~l~~~~~~~~i~~~d~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~ 79 (85)
.+++++.|+.|++||+.+++...... ..|...|.+++|+|++.++++++.|+.|++||+.+++.+..+.+|...|++
T Consensus 107 ~~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~ 186 (357)
T 4g56_B 107 GILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNC 186 (357)
T ss_dssp EEEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEE
T ss_pred CEEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEE
Confidence 56788899999999998876543221 237788999999999999999999999999999999999999999999999
Q ss_pred EEEeC
Q psy7058 80 LAFCD 84 (85)
Q Consensus 80 ~~~~~ 84 (85)
++|+|
T Consensus 187 v~~s~ 191 (357)
T 4g56_B 187 VAACP 191 (357)
T ss_dssp EEECT
T ss_pred EEEcc
Confidence 99986
No 43
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.78 E-value=9.2e-18 Score=88.42 Aligned_cols=78 Identities=14% Similarity=0.161 Sum_probs=67.2
Q ss_pred eeCCCcEEEeeCCCce---------------e-eeeeeccCCCcEEEEEecCCCCEEEEEcCCCe-EEEEEcCCcccccc
Q psy7058 7 TSADQTARIWNTEDFS---------------L-VRELGTANQRWVWDAAFTLDSKFLLTASSDGV-ARLWNIETGEVDKE 69 (85)
Q Consensus 7 ~~~~~~i~~~d~~~~~---------------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~~~ 69 (85)
++.++.|++||+.++. + ...+.. |...|.+++|+|++.++++++.|+. |++||+++++.+..
T Consensus 155 g~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~-h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~ 233 (355)
T 3vu4_A 155 EFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKA-HTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVRE 233 (355)
T ss_dssp SSCTTCEEEEECCC------------------CCEEECC-CSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEE
T ss_pred CCcCcEEEEEECCCCCccccccccccccccCcccEEEEc-cCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEE
Confidence 6899999999998765 1 444554 8889999999999999999999998 99999999999988
Q ss_pred cc-c-cccceeEEEEeCC
Q psy7058 70 YS-G-HQKAITSLAFCDF 85 (85)
Q Consensus 70 ~~-~-~~~~v~~~~~~~~ 85 (85)
+. + |...|++++|+|.
T Consensus 234 ~~~g~h~~~v~~~~~s~~ 251 (355)
T 3vu4_A 234 FRRGLDRADVVDMKWSTD 251 (355)
T ss_dssp EECTTCCSCEEEEEECTT
T ss_pred EEcCCCCCcEEEEEECCC
Confidence 88 5 8999999999984
No 44
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.77 E-value=1.6e-17 Score=92.40 Aligned_cols=67 Identities=25% Similarity=0.364 Sum_probs=58.5
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeec------cCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCcccc
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGT------ANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVD 67 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 67 (85)
|++|++++.|+.|++||..+++....+.. .|...+.+++|+|++.++++++.|+.|++||+.+++.+
T Consensus 202 g~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~ 274 (611)
T 1nr0_A 202 GSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVE 274 (611)
T ss_dssp SSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEE
T ss_pred CCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCcee
Confidence 46899999999999999998888776642 47888999999999999999999999999999876543
No 45
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.77 E-value=7.4e-18 Score=89.36 Aligned_cols=85 Identities=19% Similarity=0.286 Sum_probs=71.7
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeecc------CCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccc----
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTA------NQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEY---- 70 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~---- 70 (85)
|+++++++.|+.+++||+++++....+... +...+.+++|+|++.++++++.|+.|++||+..++....+
T Consensus 261 ~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~ 340 (380)
T 3iz6_a 261 GQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQ 340 (380)
T ss_dssp SSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSC
T ss_pred CCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEeccc
Confidence 468999999999999999998887766431 1234789999999999999999999999999888766655
Q ss_pred cccccceeEEEEeCC
Q psy7058 71 SGHQKAITSLAFCDF 85 (85)
Q Consensus 71 ~~~~~~v~~~~~~~~ 85 (85)
.+|...|.+++|+|.
T Consensus 341 ~~h~~~v~~l~~s~d 355 (380)
T 3iz6_a 341 NSHEGRISCLGLSSD 355 (380)
T ss_dssp SSCCCCCCEEEECSS
T ss_pred CCCCCceEEEEECCC
Confidence 578999999999884
No 46
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.77 E-value=1.9e-17 Score=89.18 Aligned_cols=83 Identities=22% Similarity=0.434 Sum_probs=77.1
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEE
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSL 80 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~ 80 (85)
++++++++.|+.|++||+.+++....+.. +...+.++.|+|++..+++++.|+.|++||+++++.+..+.+|...|.++
T Consensus 280 ~~~l~~~~~d~~i~vwd~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~ 358 (464)
T 3v7d_B 280 GNIVVSGSYDNTLIVWDVAQMKCLYILSG-HTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLL 358 (464)
T ss_dssp TTEEEEEETTSCEEEEETTTTEEEEEECC-CSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEE
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEecC-CCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCcEEEE
Confidence 46799999999999999999998888876 77889999999999999999999999999999999999999999999999
Q ss_pred EEeC
Q psy7058 81 AFCD 84 (85)
Q Consensus 81 ~~~~ 84 (85)
+|++
T Consensus 359 ~~~~ 362 (464)
T 3v7d_B 359 RLSD 362 (464)
T ss_dssp EECS
T ss_pred EEcC
Confidence 9875
No 47
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.77 E-value=1.3e-17 Score=88.21 Aligned_cols=84 Identities=13% Similarity=0.127 Sum_probs=68.9
Q ss_pred CceeEEeeCCC----cEEEeeCCCceee----eeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccc-c
Q psy7058 1 MGLLATTSADQ----TARIWNTEDFSLV----RELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEY-S 71 (85)
Q Consensus 1 g~~l~~~~~~~----~i~~~d~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-~ 71 (85)
|+++++++.++ .+..|++...... ..+.. +...|.+++|+|+|+++++++.|+.|++||+.+++++..+ .
T Consensus 231 g~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~-~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~ 309 (365)
T 4h5i_A 231 DTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTN-RFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQ 309 (365)
T ss_dssp TEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEES-SCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETT
T ss_pred CCEEEEEecCCcceeEEeecccccceecceeeeeecC-CCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecC
Confidence 35678887776 5788888765432 22333 6778999999999999999999999999999999988874 7
Q ss_pred ccccceeEEEEeCC
Q psy7058 72 GHQKAITSLAFCDF 85 (85)
Q Consensus 72 ~~~~~v~~~~~~~~ 85 (85)
+|...|++++|+|.
T Consensus 310 gH~~~V~~v~fSpd 323 (365)
T 4h5i_A 310 AHSFAITEVTISPD 323 (365)
T ss_dssp SSSSCEEEEEECTT
T ss_pred cccCCEEEEEECCC
Confidence 89999999999984
No 48
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.77 E-value=1.6e-17 Score=97.34 Aligned_cols=83 Identities=22% Similarity=0.413 Sum_probs=78.1
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEE
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSL 80 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~ 80 (85)
|+++++++.|+.|++||+.+++....+.. |...|.+++|+|++.++++++.|+.|++||+.+++.+..+.+|...|.++
T Consensus 627 ~~~l~s~~~d~~i~vw~~~~~~~~~~~~~-h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~ 705 (1249)
T 3sfz_A 627 GQRIASCGADKTLQVFKAETGEKLLDIKA-HEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCC 705 (1249)
T ss_dssp SSEEEEEETTSCEEEEETTTCCEEEEECC-CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEE
T ss_pred CCEEEEEeCCCeEEEEECCCCCEEEEecc-CCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEE
Confidence 56899999999999999999998888876 88889999999999999999999999999999999999999999999999
Q ss_pred EEeC
Q psy7058 81 AFCD 84 (85)
Q Consensus 81 ~~~~ 84 (85)
+|+|
T Consensus 706 ~~~~ 709 (1249)
T 3sfz_A 706 HFTN 709 (1249)
T ss_dssp EECS
T ss_pred EEec
Confidence 9987
No 49
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.77 E-value=2.4e-17 Score=85.29 Aligned_cols=83 Identities=16% Similarity=0.238 Sum_probs=70.5
Q ss_pred CceeEEeeCCCcEEEeeCCCce----eeeeeeccCCCcEEEEEecC--CCCEEEEEcCCCeEEEEEcCCc---------c
Q psy7058 1 MGLLATTSADQTARIWNTEDFS----LVRELGTANQRWVWDAAFTL--DSKFLLTASSDGVARLWNIETG---------E 65 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~----~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~i~~~~~~~~---------~ 65 (85)
|++|++++.|+.|++||+.++. ....+.. +...+.+++|+| ++.++++++.|+.|++||+..+ +
T Consensus 23 ~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~ 101 (351)
T 3f3f_A 23 GRHVATCSSDQHIKVFKLDKDTSNWELSDSWRA-HDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWN 101 (351)
T ss_dssp SSEEEEEETTSEEEEEEECSSSCCEEEEEEEEC-CSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEE
T ss_pred CCEEEEeeCCCeEEEEECCCCCCcceecceecc-CCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcc
Confidence 4689999999999999998763 4444444 788899999999 5999999999999999999876 4
Q ss_pred ccccccccccceeEEEEeC
Q psy7058 66 VDKEYSGHQKAITSLAFCD 84 (85)
Q Consensus 66 ~~~~~~~~~~~v~~~~~~~ 84 (85)
....+..|...|.+++|+|
T Consensus 102 ~~~~~~~~~~~v~~~~~~~ 120 (351)
T 3f3f_A 102 KLCTLNDSKGSLYSVKFAP 120 (351)
T ss_dssp EEEEECCCSSCEEEEEECC
T ss_pred eeeeecccCCceeEEEEcC
Confidence 4667778999999999987
No 50
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.77 E-value=1.6e-17 Score=94.03 Aligned_cols=84 Identities=25% Similarity=0.311 Sum_probs=78.2
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEE
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSL 80 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~ 80 (85)
|+++++++.++.|++||+.+++....+.. +...+.++.|+|++..+++++.++.|++|++.+++....+..|...|.++
T Consensus 25 ~~~la~~~~~g~v~iwd~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~ 103 (814)
T 3mkq_A 25 EPWVLTTLYSGRVEIWNYETQVEVRSIQV-TETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSI 103 (814)
T ss_dssp SSEEEEEETTSEEEEEETTTTEEEEEEEC-CSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEE
T ss_pred CCEEEEEeCCCEEEEEECCCCceEEEEec-CCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEE
Confidence 46899999999999999999998888876 88889999999999999999999999999999999999999999999999
Q ss_pred EEeCC
Q psy7058 81 AFCDF 85 (85)
Q Consensus 81 ~~~~~ 85 (85)
+|+|.
T Consensus 104 ~~s~~ 108 (814)
T 3mkq_A 104 AVHPT 108 (814)
T ss_dssp EECSS
T ss_pred EEeCC
Confidence 99974
No 51
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.77 E-value=2.5e-17 Score=88.21 Aligned_cols=84 Identities=15% Similarity=0.334 Sum_probs=74.2
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeecc-CCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCcccccccc-cccccee
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTA-NQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYS-GHQKAIT 78 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~v~ 78 (85)
++++++++.|+.|++||+++++....+... +...+.+++|+|++.++++++.|+.|++||++.++++..+. .|...|.
T Consensus 182 ~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~ 261 (437)
T 3gre_A 182 KSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPIT 261 (437)
T ss_dssp CEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEE
T ss_pred CCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceE
Confidence 357899999999999999999988888763 56789999999999999999999999999999988888775 6778999
Q ss_pred EEEEeC
Q psy7058 79 SLAFCD 84 (85)
Q Consensus 79 ~~~~~~ 84 (85)
+++|+|
T Consensus 262 ~~~~~~ 267 (437)
T 3gre_A 262 HVEVCQ 267 (437)
T ss_dssp EEEECT
T ss_pred EEEecc
Confidence 997765
No 52
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.76 E-value=3.8e-17 Score=84.16 Aligned_cols=82 Identities=16% Similarity=0.400 Sum_probs=69.9
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeec-cCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEE
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGT-ANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSL 80 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~ 80 (85)
+.|++ +.|++|++||+.+++....+.. .+...|.+++|+|+++++++++.|+.|++|++.+++.+..+.+|...+.++
T Consensus 37 ~~lAv-g~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~ 115 (318)
T 4ggc_A 37 NVLAV-ALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSL 115 (318)
T ss_dssp SEEEE-EETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEE
T ss_pred CEEEE-EeCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEe
Confidence 34454 5699999999999988877654 366789999999999999999999999999999999999999998888877
Q ss_pred EEeC
Q psy7058 81 AFCD 84 (85)
Q Consensus 81 ~~~~ 84 (85)
++.+
T Consensus 116 ~~~~ 119 (318)
T 4ggc_A 116 SWNS 119 (318)
T ss_dssp EEET
T ss_pred ecCC
Confidence 7654
No 53
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.76 E-value=2.3e-18 Score=94.74 Aligned_cols=84 Identities=10% Similarity=0.086 Sum_probs=72.0
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccCC-CcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEE
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTANQ-RWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSL 80 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~ 80 (85)
++|++++.|+++++||+++++....+..... ..+.+++|+|++..+++++.|+.|++||++.+.++..+.+|...|+++
T Consensus 324 ~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sv 403 (524)
T 2j04_B 324 TVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAI 403 (524)
T ss_dssp CEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEE
T ss_pred eEEEEeccCCeEEEEECCCCCcccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCCCceEEE
Confidence 5789999999999999998876655544121 247889999999999999999999999999988888888999999999
Q ss_pred EEeCC
Q psy7058 81 AFCDF 85 (85)
Q Consensus 81 ~~~~~ 85 (85)
+|+|.
T Consensus 404 a~Sp~ 408 (524)
T 2j04_B 404 GVSRL 408 (524)
T ss_dssp ECCSS
T ss_pred EeCCC
Confidence 99984
No 54
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.76 E-value=3.3e-17 Score=87.20 Aligned_cols=83 Identities=19% Similarity=0.368 Sum_probs=69.7
Q ss_pred CceeEEeeCCCcEEEeeCCCce------------eeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccc
Q psy7058 1 MGLLATTSADQTARIWNTEDFS------------LVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDK 68 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 68 (85)
|++|++++.|+.|++||+.+.. ....+.. |...+.++++++++.++++++.|+.|++||+.+++++.
T Consensus 268 g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~ 346 (393)
T 1erj_A 268 GQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIG-HKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLL 346 (393)
T ss_dssp SSEEEEEETTSEEEEEEC---------------CEEEEEEC-CSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEE
T ss_pred CCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEec-ccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEE
Confidence 4679999999999999997542 2233333 77789999999999999999999999999999999999
Q ss_pred cccccccceeEEEEeC
Q psy7058 69 EYSGHQKAITSLAFCD 84 (85)
Q Consensus 69 ~~~~~~~~v~~~~~~~ 84 (85)
.+.+|...|.+++|++
T Consensus 347 ~l~~h~~~v~~v~~~~ 362 (393)
T 1erj_A 347 MLQGHRNSVISVAVAN 362 (393)
T ss_dssp EEECCSSCEEEEEECS
T ss_pred EECCCCCCEEEEEecC
Confidence 9999999999999875
No 55
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.75 E-value=4.9e-17 Score=83.85 Aligned_cols=84 Identities=14% Similarity=0.263 Sum_probs=69.2
Q ss_pred CceeEEeeCCCcEEEeeCCCcee--eeeeeccCCCcEEEEEecCC-------------CCEEEEEcCCCeEEEEEcCCcc
Q psy7058 1 MGLLATTSADQTARIWNTEDFSL--VRELGTANQRWVWDAAFTLD-------------SKFLLTASSDGVARLWNIETGE 65 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~--~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~i~~~~~~~~~ 65 (85)
|.+|++++.|+.+++||+++... ...+.. |...+.++.|+|+ +..+++++.|+.|++||++.++
T Consensus 113 g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~-h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~ 191 (297)
T 2pm7_B 113 GPMLLVASSDGKVSVVEFKENGTTSPIIIDA-HAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDA 191 (297)
T ss_dssp CSEEEEEETTSEEEEEEBCSSSCBCCEEEEC-CSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTT
T ss_pred CcEEEEEECCCcEEEEEecCCCceeeeeeec-ccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCC
Confidence 35799999999999999987532 233333 7788999999996 5689999999999999998765
Q ss_pred ----ccccccccccceeEEEEeCC
Q psy7058 66 ----VDKEYSGHQKAITSLAFCDF 85 (85)
Q Consensus 66 ----~~~~~~~~~~~v~~~~~~~~ 85 (85)
....+.+|...|++++|+|.
T Consensus 192 ~~~~~~~~l~~H~~~V~~v~~sp~ 215 (297)
T 2pm7_B 192 QTYVLESTLEGHSDWVRDVAWSPT 215 (297)
T ss_dssp TEEEEEEEECCCSSCEEEEEECCC
T ss_pred ceEEEEEEecCCCCceEEEEECCC
Confidence 45678889999999999983
No 56
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.75 E-value=5.8e-17 Score=84.61 Aligned_cols=80 Identities=19% Similarity=0.368 Sum_probs=68.9
Q ss_pred CceeEEeeCCCcEEEeeCCC-ceee-eeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCcccccccccccccee
Q psy7058 1 MGLLATTSADQTARIWNTED-FSLV-RELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAIT 78 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~ 78 (85)
|++|++++.|+.|++||+.+ +... ..+.. +...+.+++|+|++.++++++.|+.|++||+.+++... +..|...|.
T Consensus 54 g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~-~~~~~~~v~ 131 (368)
T 3mmy_A 54 GNFLIAGSWANDVRCWEVQDSGQTIPKAQQM-HTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQ-IAQHDAPVK 131 (368)
T ss_dssp SEEEEEEETTSEEEEEEECTTSCEEEEEEEE-CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE-EEECSSCEE
T ss_pred ceEEEEECCCCcEEEEEcCCCCceeEEEecc-ccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCcee-eccccCceE
Confidence 47899999999999999987 5544 44444 88889999999999999999999999999999887665 456899999
Q ss_pred EEEE
Q psy7058 79 SLAF 82 (85)
Q Consensus 79 ~~~~ 82 (85)
+++|
T Consensus 132 ~~~~ 135 (368)
T 3mmy_A 132 TIHW 135 (368)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9999
No 57
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.75 E-value=2.8e-18 Score=90.34 Aligned_cols=84 Identities=14% Similarity=0.133 Sum_probs=68.1
Q ss_pred CceeEEeeCCCcEEEeeCCCc--eeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCcc---cccccccccc
Q psy7058 1 MGLLATTSADQTARIWNTEDF--SLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGE---VDKEYSGHQK 75 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---~~~~~~~~~~ 75 (85)
|++|++++.|+.|++||+.++ +....+.. |...+.+++|+|++.++++++.|+.|++||+..++ ....+..|..
T Consensus 23 g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~-h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~ 101 (377)
T 3dwl_C 23 RTEFVTTTATNQVELYEQDGNGWKHARTFSD-HDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNR 101 (377)
T ss_dssp SSEEECCCSSSCBCEEEEETTEEEECCCBCC-CSSCEEEEEECTTTCCEEEEETTSSEEEC------CCCCEEECCCCSS
T ss_pred CCEEEEecCCCEEEEEEccCCceEEEEEEec-CCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccCC
Confidence 468999999999999999987 55566655 78889999999999999999999999999998876 5666778999
Q ss_pred ceeEEEEeCC
Q psy7058 76 AITSLAFCDF 85 (85)
Q Consensus 76 ~v~~~~~~~~ 85 (85)
.|.+++|+|.
T Consensus 102 ~v~~~~~~~~ 111 (377)
T 3dwl_C 102 AATFVRWSPN 111 (377)
T ss_dssp CEEEEECCTT
T ss_pred ceEEEEECCC
Confidence 9999999873
No 58
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.75 E-value=7.8e-17 Score=85.80 Aligned_cols=84 Identities=17% Similarity=0.269 Sum_probs=73.7
Q ss_pred CceeEEeeCCCcEEEeeCCC-ceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeE
Q psy7058 1 MGLLATTSADQTARIWNTED-FSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITS 79 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~ 79 (85)
++.+++++.|+.+++||++. ......+.. +...+.++.|+|++..+++++.|+.|++||+++++....+..|...|.+
T Consensus 186 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~ 264 (401)
T 4aez_A 186 RHVLSSGSRSGAIHHHDVRIANHQIGTLQG-HSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKA 264 (401)
T ss_dssp TTEEEEEETTSEEEEEETTSSSCEEEEEEC-CSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCE
T ss_pred CCEEEEEcCCCCEEEEecccCcceeeEEcC-CCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEE
Confidence 35789999999999999984 444555555 7888999999999999999999999999999999888888889999999
Q ss_pred EEEeCC
Q psy7058 80 LAFCDF 85 (85)
Q Consensus 80 ~~~~~~ 85 (85)
++|+|.
T Consensus 265 ~~~~p~ 270 (401)
T 4aez_A 265 VAWCPW 270 (401)
T ss_dssp EEECTT
T ss_pred EEECCC
Confidence 999883
No 59
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.75 E-value=5.9e-17 Score=85.64 Aligned_cols=85 Identities=21% Similarity=0.312 Sum_probs=75.6
Q ss_pred CceeEEeeCC---CcEEEeeCCCceeeeeeecc------------CCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCcc
Q psy7058 1 MGLLATTSAD---QTARIWNTEDFSLVRELGTA------------NQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGE 65 (85)
Q Consensus 1 g~~l~~~~~~---~~i~~~d~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 65 (85)
+++|++++.| +.|++||+.+++....+... +...+.++.|+|++.++++++.|+.|++||+++++
T Consensus 245 ~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 324 (397)
T 1sq9_A 245 GSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKE 324 (397)
T ss_dssp TTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTE
T ss_pred CCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCc
Confidence 4678999999 99999999998887777642 56789999999999999999999999999999999
Q ss_pred cccccc------cc---------------ccceeEEEEeCC
Q psy7058 66 VDKEYS------GH---------------QKAITSLAFCDF 85 (85)
Q Consensus 66 ~~~~~~------~~---------------~~~v~~~~~~~~ 85 (85)
.+..+. .| ...|++++|+|.
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~ 365 (397)
T 1sq9_A 325 RITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKK 365 (397)
T ss_dssp EEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECT
T ss_pred eeEEEecccCcccchhhhhccccccccccCCceeEEEeccc
Confidence 888888 77 899999999974
No 60
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.75 E-value=2.9e-17 Score=86.09 Aligned_cols=84 Identities=25% Similarity=0.389 Sum_probs=72.4
Q ss_pred CceeEEeeCCCcEEEeeCC--CceeeeeeeccCCCcEEEEEecCC--CCEEEEEcCCCeEEEEEcCCcc--ccccccccc
Q psy7058 1 MGLLATTSADQTARIWNTE--DFSLVRELGTANQRWVWDAAFTLD--SKFLLTASSDGVARLWNIETGE--VDKEYSGHQ 74 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~--~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~ 74 (85)
|++|++++.|+.|++||+. +.+....+.. |...+.+++|+++ +.++++++.|+.|++||+..++ ....+..|.
T Consensus 23 ~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~ 101 (379)
T 3jrp_A 23 GKRLATCSSDKTIKIFEVEGETHKLIDTLTG-HEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHS 101 (379)
T ss_dssp SSEEEEEETTSCEEEEEEETTEEEEEEEECC-CSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEECCCS
T ss_pred CCEEEEEECCCcEEEEecCCCcceeeeEecC-CCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeeeecCCC
Confidence 4689999999999999997 4555556655 7888999999987 9999999999999999999886 667777899
Q ss_pred cceeEEEEeCC
Q psy7058 75 KAITSLAFCDF 85 (85)
Q Consensus 75 ~~v~~~~~~~~ 85 (85)
..|.+++|+|.
T Consensus 102 ~~v~~~~~~~~ 112 (379)
T 3jrp_A 102 ASVNSVQWAPH 112 (379)
T ss_dssp SCEEEEEECCG
T ss_pred cceEEEEeCCC
Confidence 99999999873
No 61
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.75 E-value=1.6e-17 Score=87.45 Aligned_cols=83 Identities=20% Similarity=0.157 Sum_probs=70.8
Q ss_pred CceeEEeeCCCcEEEeeCC------------------CceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcC
Q psy7058 1 MGLLATTSADQTARIWNTE------------------DFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIE 62 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 62 (85)
++++++++.|+.+++||+. .++....+ .+...+.+++|+|++.++++++.|+.|++||+.
T Consensus 158 ~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~ 235 (377)
T 3dwl_C 158 NVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY--PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPS 235 (377)
T ss_dssp SSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC--CCSSSEEEEEECTTSSCEEEEETTTEEC-CEEC
T ss_pred CCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc--cCCceEEEEEECCCCCEEEEEeCCCcEEEEECC
Confidence 4679999999999999985 24444444 377889999999999999999999999999999
Q ss_pred Cccc----cccccccccceeEEEEeCC
Q psy7058 63 TGEV----DKEYSGHQKAITSLAFCDF 85 (85)
Q Consensus 63 ~~~~----~~~~~~~~~~v~~~~~~~~ 85 (85)
+++. +..+..|...|.+++|+|.
T Consensus 236 ~~~~~~~~~~~~~~~~~~v~~~~~s~~ 262 (377)
T 3dwl_C 236 APEQPPRALITVKLSQLPLRSLLWANE 262 (377)
T ss_dssp STTSCEEECCCEECSSSCEEEEEEEET
T ss_pred CCCCcceeeEeecCCCCceEEEEEcCC
Confidence 8887 7888899999999999873
No 62
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.75 E-value=7e-17 Score=82.96 Aligned_cols=81 Identities=14% Similarity=0.226 Sum_probs=74.0
Q ss_pred eeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEEEE
Q psy7058 3 LLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSLAF 82 (85)
Q Consensus 3 ~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~~ 82 (85)
.+++++.|+.+++||+++++....+.. +...+.++.|+|++ .+++++.|+.|++||+.+++....+..|...|.+++|
T Consensus 197 ~~~~~~~dg~i~i~d~~~~~~~~~~~~-~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~ 274 (313)
T 3odt_A 197 HFISCSNDGLIKLVDMHTGDVLRTYEG-HESFVYCIKLLPNG-DIVSCGEDRTVRIWSKENGSLKQVITLPAISIWSVDC 274 (313)
T ss_dssp EEEEEETTSEEEEEETTTCCEEEEEEC-CSSCEEEEEECTTS-CEEEEETTSEEEEECTTTCCEEEEEECSSSCEEEEEE
T ss_pred eEEEccCCCeEEEEECCchhhhhhhhc-CCceEEEEEEecCC-CEEEEecCCEEEEEECCCCceeEEEeccCceEEEEEE
Confidence 388999999999999999998888876 77889999999999 5889999999999999999999999989999999999
Q ss_pred eCC
Q psy7058 83 CDF 85 (85)
Q Consensus 83 ~~~ 85 (85)
+|.
T Consensus 275 ~~~ 277 (313)
T 3odt_A 275 MSN 277 (313)
T ss_dssp CTT
T ss_pred ccC
Confidence 874
No 63
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.74 E-value=1.1e-16 Score=83.93 Aligned_cols=84 Identities=19% Similarity=0.190 Sum_probs=73.8
Q ss_pred CceeEEeeCCCcEEEeeCC------------------CceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcC
Q psy7058 1 MGLLATTSADQTARIWNTE------------------DFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIE 62 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 62 (85)
++++++++.|+.+++||+. .++....+.. +...+.++.|+|++.++++++.|+.|++||++
T Consensus 154 ~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~ 232 (372)
T 1k8k_C 154 SVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSS-SCGWVHGVCFSANGSRVAWVSHDSTVCLADAD 232 (372)
T ss_dssp SSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCC-CSSCEEEEEECSSSSEEEEEETTTEEEEEEGG
T ss_pred CCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCC-CCCeEEEEEECCCCCEEEEEeCCCEEEEEECC
Confidence 4678999999999999953 5566666655 77789999999999999999999999999999
Q ss_pred CccccccccccccceeEEEEeCC
Q psy7058 63 TGEVDKEYSGHQKAITSLAFCDF 85 (85)
Q Consensus 63 ~~~~~~~~~~~~~~v~~~~~~~~ 85 (85)
+++.+..+..|...|.+++|+|.
T Consensus 233 ~~~~~~~~~~~~~~v~~~~~~~~ 255 (372)
T 1k8k_C 233 KKMAVATLASETLPLLAVTFITE 255 (372)
T ss_dssp GTTEEEEEECSSCCEEEEEEEET
T ss_pred CCceeEEEccCCCCeEEEEEecC
Confidence 99999999999999999999873
No 64
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.74 E-value=1.2e-16 Score=85.11 Aligned_cols=83 Identities=17% Similarity=0.347 Sum_probs=75.5
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEEE
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSLA 81 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~ 81 (85)
+.+++++.|+.|++||+.+++........+...+.+++|+|++.++++++.++.|++||+.+++.+..+..|...|.+++
T Consensus 104 ~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~ 183 (401)
T 4aez_A 104 LNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLS 183 (401)
T ss_dssp TSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEE
T ss_pred CCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEE
Confidence 45788999999999999999888777765778899999999999999999999999999999999999999999999999
Q ss_pred EeC
Q psy7058 82 FCD 84 (85)
Q Consensus 82 ~~~ 84 (85)
|++
T Consensus 184 ~~~ 186 (401)
T 4aez_A 184 WNR 186 (401)
T ss_dssp EET
T ss_pred ECC
Confidence 975
No 65
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.74 E-value=1.9e-16 Score=82.14 Aligned_cols=82 Identities=17% Similarity=0.332 Sum_probs=72.4
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEEE
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSLA 81 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~ 81 (85)
.++++++.|+.+++||+.+++....+.. +...|.+++|+|++.++++++.|+.|++||+++.+.+..+. +...+.++.
T Consensus 186 ~~~~s~~~d~~i~i~d~~~~~~~~~~~~-h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~-~~~~v~~~~ 263 (340)
T 4aow_A 186 PIIVSCGWDKLVKVWNLANCKLKTNHIG-HTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLD-GGDIINALC 263 (340)
T ss_dssp CEEEEEETTSCEEEEETTTTEEEEEECC-CSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEE-CSSCEEEEE
T ss_pred cEEEEEcCCCEEEEEECCCCceeeEecC-CCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeec-CCceEEeee
Confidence 3578999999999999999988888776 88889999999999999999999999999999998887776 456888888
Q ss_pred EeCC
Q psy7058 82 FCDF 85 (85)
Q Consensus 82 ~~~~ 85 (85)
|+|.
T Consensus 264 ~~~~ 267 (340)
T 4aow_A 264 FSPN 267 (340)
T ss_dssp ECSS
T ss_pred cCCC
Confidence 8763
No 66
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.74 E-value=9.2e-17 Score=90.30 Aligned_cols=82 Identities=23% Similarity=0.411 Sum_probs=73.1
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEEE
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSLA 81 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~ 81 (85)
..+++++.|+.|++||+.+.+....+.. |...+.+++|+|++.++++++.|+.|++||+.+++.+..+. +...+.+++
T Consensus 532 ~~l~s~s~d~~v~vwd~~~~~~~~~~~~-h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~-~~~~v~~~~ 609 (694)
T 3dm0_A 532 PTIVSASWDKTVKVWNLSNCKLRSTLAG-HTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLE-ANSVIHALC 609 (694)
T ss_dssp CEEEEEETTSCEEEEETTTCCEEEEECC-CSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCB-CSSCEEEEE
T ss_pred ceEEEEeCCCeEEEEECCCCcEEEEEcC-CCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEec-CCCcEEEEE
Confidence 3689999999999999999888877776 88889999999999999999999999999999998887776 456899999
Q ss_pred EeCC
Q psy7058 82 FCDF 85 (85)
Q Consensus 82 ~~~~ 85 (85)
|+|.
T Consensus 610 ~sp~ 613 (694)
T 3dm0_A 610 FSPN 613 (694)
T ss_dssp ECSS
T ss_pred EcCC
Confidence 9873
No 67
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.74 E-value=9.4e-17 Score=85.41 Aligned_cols=84 Identities=18% Similarity=0.292 Sum_probs=73.4
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeee-ccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccc-cccccc-ee
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELG-TANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEY-SGHQKA-IT 78 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~~~~-v~ 78 (85)
+++++++.|+.|++||+.+++....+. ..+...+.+++|+|++..+++++.|+.|++||+++++.+..+ ..|... +.
T Consensus 145 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~ 224 (402)
T 2aq5_A 145 NVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPV 224 (402)
T ss_dssp TEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCC
T ss_pred CEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcce
Confidence 478999999999999999999888873 337888999999999999999999999999999999888887 567665 88
Q ss_pred EEEEeCC
Q psy7058 79 SLAFCDF 85 (85)
Q Consensus 79 ~~~~~~~ 85 (85)
.+.|+|.
T Consensus 225 ~~~~~~~ 231 (402)
T 2aq5_A 225 HAVFVSE 231 (402)
T ss_dssp EEEECST
T ss_pred EEEEcCC
Confidence 8888863
No 68
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.73 E-value=3e-16 Score=81.20 Aligned_cols=84 Identities=19% Similarity=0.362 Sum_probs=72.8
Q ss_pred CceeEEeeCCCcEEEeeCCCce--eeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCcccccccccccccee
Q psy7058 1 MGLLATTSADQTARIWNTEDFS--LVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAIT 78 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~ 78 (85)
++++++++.|+.+++||+.+++ ....+.. +...+.++.|+|++..+++++.++.|++||+++++....+..|...+.
T Consensus 109 ~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~ 187 (337)
T 1gxr_A 109 GCTLIVGGEASTLSIWDLAAPTPRIKAELTS-SAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGAS 187 (337)
T ss_dssp SSEEEEEESSSEEEEEECCCC--EEEEEEEC-SSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEE
T ss_pred CCEEEEEcCCCcEEEEECCCCCcceeeeccc-CCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceE
Confidence 4678999999999999999876 3444444 677899999999999999999999999999999998888988999999
Q ss_pred EEEEeCC
Q psy7058 79 SLAFCDF 85 (85)
Q Consensus 79 ~~~~~~~ 85 (85)
+++|+|.
T Consensus 188 ~~~~~~~ 194 (337)
T 1gxr_A 188 CIDISND 194 (337)
T ss_dssp EEEECTT
T ss_pred EEEECCC
Confidence 9999873
No 69
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.73 E-value=6.6e-17 Score=84.00 Aligned_cols=83 Identities=17% Similarity=0.336 Sum_probs=66.7
Q ss_pred ceeEEeeCCCcEEEeeCCCc---eeeeeeeccCCCcEEEEEecCCC----CEEEEEcCCCeEEEEEcCCcc----ccccc
Q psy7058 2 GLLATTSADQTARIWNTEDF---SLVRELGTANQRWVWDAAFTLDS----KFLLTASSDGVARLWNIETGE----VDKEY 70 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~---~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~~~~~~~~----~~~~~ 70 (85)
++|++++.|+.|++||+... +....+.. |...|.+++|+|++ ..+++++.|+.|++|++.... ....+
T Consensus 180 ~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~-h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~ 258 (316)
T 3bg1_A 180 KRFASGGCDNLIKLWKEEEDGQWKEEQKLEA-HSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLL 258 (316)
T ss_dssp CBEECCBTTSBCCEEEECTTSCEEEEECCBC-CSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEE
T ss_pred ceEEEecCCCeEEEEEeCCCCccceeeeccc-CCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhh
Confidence 47899999999999999754 34445554 88889999999986 789999999999999987631 22345
Q ss_pred cccccceeEEEEeCC
Q psy7058 71 SGHQKAITSLAFCDF 85 (85)
Q Consensus 71 ~~~~~~v~~~~~~~~ 85 (85)
..|...|.+++|+|.
T Consensus 259 ~~~~~~v~~v~~sp~ 273 (316)
T 3bg1_A 259 HKFNDVVWHVSWSIT 273 (316)
T ss_dssp EECSSCEEEEEECTT
T ss_pred hcCCCcEEEEEEcCC
Confidence 567889999999984
No 70
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.73 E-value=1.1e-16 Score=83.83 Aligned_cols=84 Identities=11% Similarity=0.111 Sum_probs=65.2
Q ss_pred CceeEEeeCCCcEEEeeCCCceee-eeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccc---cccc
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLV-RELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSG---HQKA 76 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~---~~~~ 76 (85)
|.++++|+.|+.|++||+++++.. ..+...|...+.+++|+|++.++++++.+ .|++||++..+....+.. +...
T Consensus 182 g~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~~~-~v~iwd~~~~~~~~~~~~~~~~~~~ 260 (343)
T 3lrv_A 182 SLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVECDQ-TVVCFDLRKDVGTLAYPTYTIPEFK 260 (343)
T ss_dssp SCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEESS-BEEEEETTSSTTCBSSCCCBC----
T ss_pred CCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEeCC-eEEEEEcCCCCcceeeccccccccc
Confidence 467899999999999999998877 55655477899999999999999999855 999999998877655543 3344
Q ss_pred ee--EEEEeCC
Q psy7058 77 IT--SLAFCDF 85 (85)
Q Consensus 77 v~--~~~~~~~ 85 (85)
+. +++|+|.
T Consensus 261 ~~~~~~~~~~~ 271 (343)
T 3lrv_A 261 TGTVTYDIDDS 271 (343)
T ss_dssp -CCEEEEECTT
T ss_pred ccceEEEECCC
Confidence 44 5888763
No 71
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.73 E-value=7.7e-17 Score=84.15 Aligned_cols=81 Identities=19% Similarity=0.119 Sum_probs=70.6
Q ss_pred eEEeeCCCcEEEeeCCCc---eeeeeeeccCCC------------cEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccc
Q psy7058 4 LATTSADQTARIWNTEDF---SLVRELGTANQR------------WVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDK 68 (85)
Q Consensus 4 l~~~~~~~~i~~~d~~~~---~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 68 (85)
+++++.|+.+++||+... .....+.. +.. .+.+++|+|++.++++++.|+.|++||+.+++.+.
T Consensus 231 ~~~~~~dg~i~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~ 309 (368)
T 3mmy_A 231 FALGSIEGRVAIHYINPPNPAKDNFTFKC-HRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLK 309 (368)
T ss_dssp EEEEETTSEEEEEESSCSCHHHHSEEEEC-SEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEE
T ss_pred EEEecCCCcEEEEecCCCCccccceeeee-eecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEE
Confidence 899999999999999876 33444444 332 69999999999999999999999999999999999
Q ss_pred cccccccceeEEEEeCC
Q psy7058 69 EYSGHQKAITSLAFCDF 85 (85)
Q Consensus 69 ~~~~~~~~v~~~~~~~~ 85 (85)
.+..|...|.+++|+|.
T Consensus 310 ~~~~~~~~v~~~~~s~~ 326 (368)
T 3mmy_A 310 TSEQLDQPISACCFNHN 326 (368)
T ss_dssp ECCCCSSCEEEEEECTT
T ss_pred EecCCCCCceEEEECCC
Confidence 99999999999999884
No 72
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.73 E-value=2e-16 Score=84.15 Aligned_cols=82 Identities=29% Similarity=0.388 Sum_probs=70.6
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccc---cccce
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSG---HQKAI 77 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~---~~~~v 77 (85)
+++|++++.|+.|++||+.+++....+.. |...+.+++|+|++..+++++.|+.|++||+++++....+.. +...+
T Consensus 151 ~~~l~s~s~d~~i~iwd~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v 229 (420)
T 3vl1_A 151 GEALISSSQDMQLKIWSVKDGSNPRTLIG-HRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGV 229 (420)
T ss_dssp SSEEEEEETTSEEEEEETTTCCCCEEEEC-CSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCE
T ss_pred CCEEEEEeCCCeEEEEeCCCCcCceEEcC-CCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCc
Confidence 46899999999999999999988888876 888899999999999999999999999999999888777763 45566
Q ss_pred eEEEEe
Q psy7058 78 TSLAFC 83 (85)
Q Consensus 78 ~~~~~~ 83 (85)
.+++|.
T Consensus 230 ~~~~~~ 235 (420)
T 3vl1_A 230 NSIALF 235 (420)
T ss_dssp EEEEEE
T ss_pred cEEEEe
Confidence 666653
No 73
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.73 E-value=8.8e-17 Score=84.75 Aligned_cols=85 Identities=13% Similarity=0.195 Sum_probs=60.6
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCC--CcEEEEEecC------------------------------------
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQ--RWVWDAAFTL------------------------------------ 42 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~--~~~~~~~~~~------------------------------------ 42 (85)
+.+|++++.|++|++||+.+++.+..+...+. ..+.+++|+|
T Consensus 193 ~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~ 272 (356)
T 2w18_A 193 QEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLS 272 (356)
T ss_dssp TTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEE
T ss_pred CceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEE
Confidence 36789999999999999999998887764211 1222222222
Q ss_pred ---------CCC------------EEEEEcCCCeEEEEEcCCcccccccccccccee-EEEEeCC
Q psy7058 43 ---------DSK------------FLLTASSDGVARLWNIETGEVDKEYSGHQKAIT-SLAFCDF 85 (85)
Q Consensus 43 ---------~~~------------~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~ 85 (85)
+|+ .+++++.|++|++||+.+++.+.++.+|...+. .++|+|.
T Consensus 273 l~v~~~~~p~Gh~~~~lsg~~sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPD 337 (356)
T 2w18_A 273 VGVMLYCLPPGQAGRFLEGDVKDHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGT 337 (356)
T ss_dssp EEEEEECCCTTCCCCEEEEEEETTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSS
T ss_pred EEEEEeeccCCCcceeEccccCCCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCC
Confidence 232 356777899999999999999999988877665 5899984
No 74
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.73 E-value=2e-16 Score=89.61 Aligned_cols=83 Identities=20% Similarity=0.399 Sum_probs=75.3
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCc-cccccccccccceeE
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETG-EVDKEYSGHQKAITS 79 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~v~~ 79 (85)
|++|++++.|+.|++||+.+++....+.. +...+.+++|+|++..+++++.|+.|++|++..+ .....+..|...|.+
T Consensus 67 ~~~l~~~~~dg~i~vw~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~ 145 (814)
T 3mkq_A 67 KNWIIVGSDDFRIRVFNYNTGEKVVDFEA-HPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMC 145 (814)
T ss_dssp GTEEEEEETTSEEEEEETTTCCEEEEEEC-CSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEE
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEEec-CCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEE
Confidence 46799999999999999999998888876 7888999999999999999999999999999876 566777889999999
Q ss_pred EEEeC
Q psy7058 80 LAFCD 84 (85)
Q Consensus 80 ~~~~~ 84 (85)
++|+|
T Consensus 146 ~~~~p 150 (814)
T 3mkq_A 146 VAFNP 150 (814)
T ss_dssp EEEET
T ss_pred EEEEc
Confidence 99997
No 75
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.72 E-value=2.6e-16 Score=84.55 Aligned_cols=81 Identities=26% Similarity=0.449 Sum_probs=74.1
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEE
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSL 80 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~ 80 (85)
++++++++.|+.|++||+.+++....+.. |...+.++.+ ++..+++++.|+.|++||+.+++....+..|...|.++
T Consensus 143 ~~~l~~g~~dg~i~iwd~~~~~~~~~~~~-h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l 219 (435)
T 1p22_A 143 DQKIVSGLRDNTIKIWDKNTLECKRILTG-HTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHL 219 (435)
T ss_dssp SSEEEEEESSSCEEEEESSSCCEEEEECC-CSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEE
T ss_pred CCEEEEEeCCCeEEEEeCCCCeEEEEEcC-CCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEEE
Confidence 46799999999999999999988888876 8888999988 78999999999999999999999999999999999999
Q ss_pred EEeC
Q psy7058 81 AFCD 84 (85)
Q Consensus 81 ~~~~ 84 (85)
+|++
T Consensus 220 ~~~~ 223 (435)
T 1p22_A 220 RFNN 223 (435)
T ss_dssp ECCT
T ss_pred EEcC
Confidence 9875
No 76
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.72 E-value=5.2e-16 Score=80.32 Aligned_cols=83 Identities=19% Similarity=0.329 Sum_probs=73.7
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEE
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSL 80 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~ 80 (85)
++++++++.|+.+++||+.+++....+.. +...+.++.|+|++..+++++.++.+++||+++++....+. +...+.++
T Consensus 153 ~~~l~~~~~dg~v~~~d~~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~-~~~~v~~~ 230 (337)
T 1gxr_A 153 SKVCFSCCSDGNIAVWDLHNQTLVRQFQG-HTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHD-FTSQIFSL 230 (337)
T ss_dssp SSEEEEEETTSCEEEEETTTTEEEEEECC-CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEE
T ss_pred CCEEEEEeCCCcEEEEeCCCCceeeeeec-ccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeec-CCCceEEE
Confidence 46789999999999999999988888776 77789999999999999999999999999999988777765 67889999
Q ss_pred EEeCC
Q psy7058 81 AFCDF 85 (85)
Q Consensus 81 ~~~~~ 85 (85)
+|+|.
T Consensus 231 ~~s~~ 235 (337)
T 1gxr_A 231 GYCPT 235 (337)
T ss_dssp EECTT
T ss_pred EECCC
Confidence 99873
No 77
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.72 E-value=3.6e-16 Score=84.02 Aligned_cols=83 Identities=20% Similarity=0.336 Sum_probs=71.0
Q ss_pred ceeEEeeCCCcEEEeeCCCc---eeeeeeeccCCCcEEEEEecCCCC-EEEEEcCCCeEEEEEcCC-ccccccccccccc
Q psy7058 2 GLLATTSADQTARIWNTEDF---SLVRELGTANQRWVWDAAFTLDSK-FLLTASSDGVARLWNIET-GEVDKEYSGHQKA 76 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~ 76 (85)
.++++++.|+.|++||+++. +....+.. +...+++++|+|++. .+++++.++.|++||++. ..++..+..|...
T Consensus 245 ~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~-~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~ 323 (430)
T 2xyi_A 245 SLFGSVADDQKLMIWDTRNNNTSKPSHTVDA-HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDE 323 (430)
T ss_dssp TEEEEEETTSEEEEEETTCSCSSSCSEEEEC-CSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSC
T ss_pred CEEEEEeCCCeEEEEECCCCCCCcceeEeec-CCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCC
Confidence 56889999999999999976 45555554 778899999999886 688999999999999997 4567788889999
Q ss_pred eeEEEEeCC
Q psy7058 77 ITSLAFCDF 85 (85)
Q Consensus 77 v~~~~~~~~ 85 (85)
|.+++|+|.
T Consensus 324 v~~i~~sp~ 332 (430)
T 2xyi_A 324 IFQVQWSPH 332 (430)
T ss_dssp EEEEEECSS
T ss_pred EEEEEECCC
Confidence 999999984
No 78
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.72 E-value=5.8e-17 Score=89.27 Aligned_cols=83 Identities=10% Similarity=0.111 Sum_probs=68.1
Q ss_pred ceeEEeeCCCcEEEeeCCCceee-eeeeccCCCcEEEE--EecCCC-CEEEEEcCCCeEEEEEcCCcccccccccccc--
Q psy7058 2 GLLATTSADQTARIWNTEDFSLV-RELGTANQRWVWDA--AFTLDS-KFLLTASSDGVARLWNIETGEVDKEYSGHQK-- 75 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~-- 75 (85)
+.|++|+.|+.|++||+.++... ..+.. |...|.++ .+++++ .++++++.|++|++||++++++...+.+|..
T Consensus 278 ~~lasgs~DgtV~lWD~~~~~~~~~~~~~-H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~ 356 (524)
T 2j04_B 278 TTVVCGFKNGFVAEFDLTDPEVPSFYDQV-HDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGS 356 (524)
T ss_dssp SEEEEEETTSEEEEEETTBCSSCSEEEEC-SSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCC
T ss_pred CeEEEEeCCCEEEEEECCCCCCceEEeec-ccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccC
Confidence 46899999999999999876433 34444 88889999 578887 8999999999999999999888777766653
Q ss_pred ceeEEEEeCC
Q psy7058 76 AITSLAFCDF 85 (85)
Q Consensus 76 ~v~~~~~~~~ 85 (85)
.|.+++|+|.
T Consensus 357 ~v~~v~fsp~ 366 (524)
T 2j04_B 357 NLVPVVYCPQ 366 (524)
T ss_dssp SCCCEEEETT
T ss_pred cccceEeCCC
Confidence 4788999983
No 79
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.72 E-value=1.8e-16 Score=82.82 Aligned_cols=84 Identities=21% Similarity=0.407 Sum_probs=71.7
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeee--ccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccc------
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELG--TANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSG------ 72 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~------ 72 (85)
++++++++.|+.|++||+.+++....+. ..+...+.++.|+|++..+++++.|+.|++||+++++....+..
T Consensus 128 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~ 207 (366)
T 3k26_A 128 PNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNP 207 (366)
T ss_dssp TTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCG
T ss_pred CCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecC
Confidence 4679999999999999999998887773 23778899999999999999999999999999998876655544
Q ss_pred ----------------------cccceeEEEEeC
Q psy7058 73 ----------------------HQKAITSLAFCD 84 (85)
Q Consensus 73 ----------------------~~~~v~~~~~~~ 84 (85)
|...|.+++|++
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 241 (366)
T 3k26_A 208 NKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWLG 241 (366)
T ss_dssp GGCSSCCCCEEECCCSEEECSSCSSCCCEEEEET
T ss_pred CCCcccccceeeccCccccccCCcceEEEEEEcC
Confidence 888899988863
No 80
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.72 E-value=5.4e-16 Score=80.23 Aligned_cols=83 Identities=18% Similarity=0.352 Sum_probs=68.6
Q ss_pred CceeEEeeCCCcEEEeeCCCc---------eeeeeeeccCCCcEEEEEecCC--CCEEEEEcCCCeEEEEEcCCcccccc
Q psy7058 1 MGLLATTSADQTARIWNTEDF---------SLVRELGTANQRWVWDAAFTLD--SKFLLTASSDGVARLWNIETGEVDKE 69 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~---------~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~ 69 (85)
+++|++++.|+.|++||+.++ +....+.. +...+.++.|+|+ +.++++++.|+.|++||+++++.+..
T Consensus 71 ~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~ 149 (351)
T 3f3f_A 71 GRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLND-SKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRS 149 (351)
T ss_dssp CSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECC-CSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTC
T ss_pred CCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecc-cCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhcc
Confidence 468999999999999999876 33445544 7788999999999 99999999999999999988876554
Q ss_pred cc-------------ccccceeEEEEeC
Q psy7058 70 YS-------------GHQKAITSLAFCD 84 (85)
Q Consensus 70 ~~-------------~~~~~v~~~~~~~ 84 (85)
+. .+...+.+++|+|
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p 177 (351)
T 3f3f_A 150 WTLTSEMKVLSIPPANHLQSDFCLSWCP 177 (351)
T ss_dssp CEEEEEEESCSCCCSSCSCCCEEEEECC
T ss_pred ccccccccccccccCCcccceeEEEecc
Confidence 43 4667888888876
No 81
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.71 E-value=2.5e-16 Score=90.97 Aligned_cols=81 Identities=15% Similarity=0.069 Sum_probs=66.9
Q ss_pred CceeEEeeCCCcEEEeeCCCce---------------------------------------------eeeeeeccCCCcE
Q psy7058 1 MGLLATTSADQTARIWNTEDFS---------------------------------------------LVRELGTANQRWV 35 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~---------------------------------------------~~~~~~~~~~~~~ 35 (85)
|++||+++.|++|++||+.+++ +...+.. |...|
T Consensus 500 g~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~-h~~~V 578 (902)
T 2oaj_A 500 TLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHA-NKGKT 578 (902)
T ss_dssp TTEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECC-CSCSE
T ss_pred CCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEc-CCCcE
Confidence 5789999999999999987652 2334444 78889
Q ss_pred EEEEecCCCCEEEEEcCCCeEEEEEcCCcccc-----cccc-ccccceeEEEEe
Q psy7058 36 WDAAFTLDSKFLLTASSDGVARLWNIETGEVD-----KEYS-GHQKAITSLAFC 83 (85)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-----~~~~-~~~~~v~~~~~~ 83 (85)
++++|+|+| ++++++.|+.|++||+.....+ ..+. +|...|++++|+
T Consensus 579 ~svafSpdG-~lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs 631 (902)
T 2oaj_A 579 SAINNSNIG-FVGIAYAAGSLMLIDRRGPAIIYMENIREISGAQSACVTCIEFV 631 (902)
T ss_dssp EEEEECBTS-EEEEEETTSEEEEEETTTTEEEEEEEGGGTCSSCCCCEEEEEEE
T ss_pred EEEEecCCc-EEEEEeCCCcEEEEECCCCeEEEEeehhHhccccccceEEEEEE
Confidence 999999999 9999999999999999776543 3454 789999999999
No 82
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.71 E-value=5.5e-16 Score=81.91 Aligned_cols=81 Identities=19% Similarity=0.240 Sum_probs=69.5
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCC-EEEEEcCCCeEEEEEcCC----cccccccccccc
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSK-FLLTASSDGVARLWNIET----GEVDKEYSGHQK 75 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~~~~~----~~~~~~~~~~~~ 75 (85)
++++++++.|+.+++||+. ++....+.. +...+.+++|+|++. .+++++.|+.|++||+++ +..+..+ .|..
T Consensus 175 ~~~l~~~~~d~~i~i~d~~-~~~~~~~~~-h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~ 251 (383)
T 3ei3_B 175 RQMLATGDSTGRLLLLGLD-GHEIFKEKL-HKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEK 251 (383)
T ss_dssp TTEEEEEETTSEEEEEETT-SCEEEEEEC-SSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSS
T ss_pred CCEEEEECCCCCEEEEECC-CCEEEEecc-CCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCC
Confidence 4679999999999999984 667777766 778899999999998 899999999999999987 4444445 5899
Q ss_pred ceeEEEEeC
Q psy7058 76 AITSLAFCD 84 (85)
Q Consensus 76 ~v~~~~~~~ 84 (85)
.|.+++|+|
T Consensus 252 ~v~~~~~s~ 260 (383)
T 3ei3_B 252 PVNAAYFNP 260 (383)
T ss_dssp CEEEEEECT
T ss_pred ceEEEEEcC
Confidence 999999998
No 83
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.71 E-value=3.6e-16 Score=86.73 Aligned_cols=82 Identities=11% Similarity=0.233 Sum_probs=65.7
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccC----CCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccc-------ccc
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTAN----QRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEV-------DKE 69 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-------~~~ 69 (85)
|++||+++.|+.+++||..+ ....+. .+ ...+.+++|+|+|+++++++.||.|++|++..++. +.+
T Consensus 97 G~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~t 173 (588)
T 2j04_A 97 DDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESS 173 (588)
T ss_dssp SSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEE
T ss_pred CCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeee
Confidence 57899999999999999654 333333 12 12599999999999999999999999999988753 345
Q ss_pred c----cccccceeEEEEeCC
Q psy7058 70 Y----SGHQKAITSLAFCDF 85 (85)
Q Consensus 70 ~----~~~~~~v~~~~~~~~ 85 (85)
+ .+|...|.+++|+|.
T Consensus 174 i~~~~~gh~~~V~sVawSPd 193 (588)
T 2j04_A 174 IRLSDAGSKDWVTHIVWYED 193 (588)
T ss_dssp EECSCTTCCCCEEEEEEETT
T ss_pred eecccccccccEEEEEEcCC
Confidence 4 567789999999984
No 84
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.71 E-value=3.6e-16 Score=90.35 Aligned_cols=82 Identities=10% Similarity=0.076 Sum_probs=71.0
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCcccc-----------cc
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVD-----------KE 69 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-----------~~ 69 (85)
|++|++++.|+.|++||+.+++....+. +...+.+++|+|++.++++++.|+.|++||+..++.. ..
T Consensus 69 g~~L~S~s~D~~v~lWd~~~~~~~~~~~--~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~ 146 (902)
T 2oaj_A 69 GIYLVVINAKDTVYVLSLYSQKVLTTVF--VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFF 146 (902)
T ss_dssp TTEEEEEETTCEEEEEETTTCSEEEEEE--CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTC
T ss_pred CCEEEEEECcCeEEEEECCCCcEEEEEc--CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccc
Confidence 4579999999999999999988877775 4567999999999999999999999999999877643 33
Q ss_pred ccccccceeEEEEeC
Q psy7058 70 YSGHQKAITSLAFCD 84 (85)
Q Consensus 70 ~~~~~~~v~~~~~~~ 84 (85)
+.+|...|.+++|+|
T Consensus 147 ~~~h~~~V~sl~~sp 161 (902)
T 2oaj_A 147 PAARLSPIVSIQWNP 161 (902)
T ss_dssp SSSCCCCCCEEEEET
T ss_pred cccCCCCeEEEEEcc
Confidence 467889999999998
No 85
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.71 E-value=3.7e-16 Score=81.90 Aligned_cols=84 Identities=15% Similarity=0.197 Sum_probs=71.5
Q ss_pred CceeEEeeCCCcEEEeeCCCce--eeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccc--cccccccc
Q psy7058 1 MGLLATTSADQTARIWNTEDFS--LVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDK--EYSGHQKA 76 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~--~~~~~~~~ 76 (85)
|+++++++.|+.|++||+.+++ ....+.. +...+.+++|+|++.++++++.|+.|++||+..++... .+..|...
T Consensus 20 ~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~ 98 (372)
T 1k8k_C 20 RTQIAICPNNHEVHIYEKSGNKWVQVHELKE-HNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRA 98 (372)
T ss_dssp SSEEEEECSSSEEEEEEEETTEEEEEEEEEC-CSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSC
T ss_pred CCEEEEEeCCCEEEEEeCCCCcEEeeeeecC-CCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEeecCCCc
Confidence 4678999999999999998876 6666665 78889999999999999999999999999998776433 34568889
Q ss_pred eeEEEEeCC
Q psy7058 77 ITSLAFCDF 85 (85)
Q Consensus 77 v~~~~~~~~ 85 (85)
|.+++|+|.
T Consensus 99 v~~~~~~~~ 107 (372)
T 1k8k_C 99 ARCVRWAPN 107 (372)
T ss_dssp EEEEEECTT
T ss_pred eeEEEECCC
Confidence 999999873
No 86
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.71 E-value=4e-16 Score=85.99 Aligned_cols=83 Identities=10% Similarity=0.141 Sum_probs=73.4
Q ss_pred CceeEEeeC-CCcEEEeeCCCceee-eeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccc-cccce
Q psy7058 1 MGLLATTSA-DQTARIWNTEDFSLV-RELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSG-HQKAI 77 (85)
Q Consensus 1 g~~l~~~~~-~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~v 77 (85)
++++++++. |+.+++||+.+++.. ..+.. +...+.+++|+|++.++++++.|+.|++|++.+++.+..+.+ |...|
T Consensus 456 ~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~-~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v 534 (615)
T 1pgu_A 456 QNYVAVGLEEGNTIQVFKLSDLEVSFDLKTP-LRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKI 534 (615)
T ss_dssp SSEEEEEETTTSCEEEEETTEEEEEEECSSC-CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCCCSSCE
T ss_pred CCEEEEeecCCCeEEEEECCCccccccccCC-ccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCcceeEeecCCCCce
Confidence 467889999 999999999987665 33333 778899999999999999999999999999999999888887 99999
Q ss_pred eEEEEeC
Q psy7058 78 TSLAFCD 84 (85)
Q Consensus 78 ~~~~~~~ 84 (85)
++++|+|
T Consensus 535 ~~~~~sp 541 (615)
T 1pgu_A 535 NAISWKP 541 (615)
T ss_dssp EEEEECC
T ss_pred eEEEEcC
Confidence 9999998
No 87
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.70 E-value=6.1e-16 Score=82.03 Aligned_cols=83 Identities=20% Similarity=0.224 Sum_probs=75.2
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEE
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSL 80 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~ 80 (85)
++++++++.|+.+++||+.+++....+.. +...+.++.|+|++ .+++++.++.|++||+++++.+..+..|...+.++
T Consensus 259 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~-~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~ 336 (425)
T 1r5m_A 259 NKLLLSASDDGTLRIWHGGNGNSQNCFYG-HSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAG 336 (425)
T ss_dssp TTEEEEEETTSCEEEECSSSBSCSEEECC-CSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEE
T ss_pred CCEEEEEcCCCEEEEEECCCCccceEecC-CCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecccCCccEEEE
Confidence 46789999999999999999888887766 77789999999999 99999999999999999999888888899999999
Q ss_pred EEeCC
Q psy7058 81 AFCDF 85 (85)
Q Consensus 81 ~~~~~ 85 (85)
+|+|.
T Consensus 337 ~~s~~ 341 (425)
T 1r5m_A 337 RISQD 341 (425)
T ss_dssp EECTT
T ss_pred EEcCC
Confidence 99873
No 88
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.70 E-value=1e-15 Score=79.77 Aligned_cols=83 Identities=12% Similarity=0.212 Sum_probs=71.9
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecC---CCCEEEEEcCCCeEEEEEcCCcccccccc-----c
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTL---DSKFLLTASSDGVARLWNIETGEVDKEYS-----G 72 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-----~ 72 (85)
++++++++.|+.+++||+++++...... +...+.++.|+| ++..+++++.++.|++||++.++....+. .
T Consensus 180 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~ 257 (357)
T 3i2n_A 180 ERVVCAGYDNGDIKLFDLRNMALRWETN--IKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKA 257 (357)
T ss_dssp CCEEEEEETTSEEEEEETTTTEEEEEEE--CSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEEC
T ss_pred CCEEEEEccCCeEEEEECccCceeeecC--CCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCC
Confidence 4678999999999999999888755433 667899999999 89999999999999999999887776665 8
Q ss_pred cccceeEEEEeCC
Q psy7058 73 HQKAITSLAFCDF 85 (85)
Q Consensus 73 ~~~~v~~~~~~~~ 85 (85)
|...|.+++|+|.
T Consensus 258 ~~~~v~~~~~~~~ 270 (357)
T 3i2n_A 258 HKSTVWQVRHLPQ 270 (357)
T ss_dssp CSSCEEEEEEETT
T ss_pred CcCCEEEEEECCC
Confidence 9999999999984
No 89
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.70 E-value=6.9e-16 Score=80.90 Aligned_cols=83 Identities=20% Similarity=0.239 Sum_probs=70.2
Q ss_pred CceeEEeeCCCcEEEeeCCCce--eeeeeeccCCCcEEEEEecCC--CCEEEEEcCCCeEEEEEcCCcc--ccccccccc
Q psy7058 1 MGLLATTSADQTARIWNTEDFS--LVRELGTANQRWVWDAAFTLD--SKFLLTASSDGVARLWNIETGE--VDKEYSGHQ 74 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~--~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~ 74 (85)
+++|++++.|+.|++||+.+++ ....+.. +...+.+++|+|+ +..+++++.|+.|++||+.... ....+..|.
T Consensus 69 ~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~ 147 (379)
T 3jrp_A 69 GTILASCSYDGKVLIWKEENGRWSQIAVHAV-HSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHA 147 (379)
T ss_dssp CSEEEEEETTSCEEEEEEETTEEEEEEEECC-CSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCT
T ss_pred CCEEEEeccCCEEEEEEcCCCceeEeeeecC-CCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCC
Confidence 4689999999999999999876 4444444 7788999999999 9999999999999999998774 334566788
Q ss_pred cceeEEEEeC
Q psy7058 75 KAITSLAFCD 84 (85)
Q Consensus 75 ~~v~~~~~~~ 84 (85)
..|.+++|+|
T Consensus 148 ~~v~~~~~~~ 157 (379)
T 3jrp_A 148 IGVNSASWAP 157 (379)
T ss_dssp TCEEEEEECC
T ss_pred CceEEEEEcC
Confidence 9999999987
No 90
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.70 E-value=5.3e-16 Score=82.27 Aligned_cols=82 Identities=16% Similarity=0.232 Sum_probs=74.0
Q ss_pred eeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCcc-----------------
Q psy7058 3 LLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGE----------------- 65 (85)
Q Consensus 3 ~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~----------------- 65 (85)
++++++.|+.+++||+.+++....+.. +...+.++.|+|++.++++++.++.|++|++.+++
T Consensus 302 ~l~~~~~d~~i~i~d~~~~~~~~~~~~-~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~ 380 (425)
T 1r5m_A 302 KVISCSMDGSVRLWSLKQNTLLALSIV-DGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPL 380 (425)
T ss_dssp EEEEEETTSEEEEEETTTTEEEEEEEC-TTCCEEEEEECTTSSEEEEEETTSCEEEEECHHHHC--------------CE
T ss_pred EEEEEeCCCcEEEEECCCCcEeEeccc-CCccEEEEEEcCCCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcc
Confidence 689999999999999999988888776 77789999999999999999999999999999887
Q ss_pred ---cccccccccc--ceeEEEEeCC
Q psy7058 66 ---VDKEYSGHQK--AITSLAFCDF 85 (85)
Q Consensus 66 ---~~~~~~~~~~--~v~~~~~~~~ 85 (85)
.+..+..|.. .|.+++|+|.
T Consensus 381 ~~~~~~~~~~~~~~~~v~~~~~s~~ 405 (425)
T 1r5m_A 381 PIPLYASYQSSQDNDYIFDLSWNCA 405 (425)
T ss_dssp ECCEEEEECCTTCCCCEEEEEECTT
T ss_pred cchhhhhhcCcccCCceEEEEccCC
Confidence 7788888866 9999999874
No 91
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.70 E-value=1.3e-15 Score=78.27 Aligned_cols=83 Identities=24% Similarity=0.299 Sum_probs=71.6
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCc---cccccccccccce
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETG---EVDKEYSGHQKAI 77 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~~~~~~~~~~v 77 (85)
++++++++.|+.+++||+.+++....+.. +...+.+++|+|++..+++++.++.+++|++... +....+..|...|
T Consensus 29 ~~~l~s~~~dg~v~vw~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i 107 (313)
T 3odt_A 29 DSKVASVSRDGTVRLWSKDDQWLGTVVYT-GQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNV 107 (313)
T ss_dssp TTEEEEEETTSEEEEEEESSSEEEEEEEE-CSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC-CEECCCSSCE
T ss_pred CCEEEEEEcCCcEEEEECCCCEEEEEeec-CCccEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCCcccchhhcccCE
Confidence 46899999999999999998887777776 7788999999999999999999999999998754 4566777889999
Q ss_pred eEEEEeC
Q psy7058 78 TSLAFCD 84 (85)
Q Consensus 78 ~~~~~~~ 84 (85)
.+++|++
T Consensus 108 ~~~~~~~ 114 (313)
T 3odt_A 108 CSLSFQD 114 (313)
T ss_dssp EEEEEET
T ss_pred EEEEecC
Confidence 9998854
No 92
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.70 E-value=5.1e-16 Score=83.48 Aligned_cols=84 Identities=18% Similarity=0.216 Sum_probs=68.1
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeec-cCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeE
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGT-ANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITS 79 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~ 79 (85)
+++|++++.|+.|++||+.+......... .....+.++.|++++.++++++.++.|++||++ ++.+..+.+|...|.+
T Consensus 177 ~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~-~~~~~~~~~h~~~v~~ 255 (435)
T 4e54_B 177 TNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMD-GKELWNLRMHKKKVTH 255 (435)
T ss_dssp TTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESS-SCBCCCSBCCSSCEEE
T ss_pred CCEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccC-cceeEEEecccceEEe
Confidence 46899999999999999986544332222 133457889999999999999999999999986 5667788899999999
Q ss_pred EEEeCC
Q psy7058 80 LAFCDF 85 (85)
Q Consensus 80 ~~~~~~ 85 (85)
++|+|.
T Consensus 256 v~~~p~ 261 (435)
T 4e54_B 256 VALNPC 261 (435)
T ss_dssp EEECTT
T ss_pred eeecCC
Confidence 999873
No 93
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.70 E-value=9.9e-16 Score=82.37 Aligned_cols=81 Identities=22% Similarity=0.465 Sum_probs=68.2
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEE
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSL 80 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~ 80 (85)
|+++++++.|+.|++||+.+++....+.. |...+.++.++ +..+++++.|+.|++||+.+++....+.+|...|.++
T Consensus 129 g~~l~sg~~dg~i~vwd~~~~~~~~~~~~-h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~ 205 (445)
T 2ovr_B 129 GNRIVSGSDDNTLKVWSAVTGKCLRTLVG-HTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCM 205 (445)
T ss_dssp TTEEEEEETTSCEEEEETTTCCEEEECCC-CSSCEEEEEEE--TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEE
T ss_pred CCEEEEEECCCcEEEEECCCCcEEEEEcC-CCCCEEEEEec--CCEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEE
Confidence 46788999999999999988888877776 77788888886 6688888999999999998888888888888888888
Q ss_pred EEeC
Q psy7058 81 AFCD 84 (85)
Q Consensus 81 ~~~~ 84 (85)
+|++
T Consensus 206 ~~~~ 209 (445)
T 2ovr_B 206 HLHE 209 (445)
T ss_dssp EEET
T ss_pred EecC
Confidence 8764
No 94
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.70 E-value=3.1e-16 Score=89.09 Aligned_cols=84 Identities=25% Similarity=0.389 Sum_probs=72.5
Q ss_pred CceeEEeeCCCcEEEeeCC--CceeeeeeeccCCCcEEEEEecCC--CCEEEEEcCCCeEEEEEcCCcc--ccccccccc
Q psy7058 1 MGLLATTSADQTARIWNTE--DFSLVRELGTANQRWVWDAAFTLD--SKFLLTASSDGVARLWNIETGE--VDKEYSGHQ 74 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~--~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~ 74 (85)
|+++++++.|+.|++||+. +++....+.. |...|.+++|+++ +..+++++.|+.|++||+.+++ ....+..|.
T Consensus 21 g~~latg~~dg~I~vwd~~~~~~~~~~~l~~-h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~ 99 (753)
T 3jro_A 21 GKRLATCSSDKTIKIFEVEGETHKLIDTLTG-HEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHS 99 (753)
T ss_dssp SCCEEEEETTTEEEEEEEETTEEEEEEEECC-CSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEECCCS
T ss_pred CCeEEEEECCCcEEEEecCCCCCccceeccC-CcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcccccccccCCC
Confidence 4679999999999999987 4455556655 8888999999987 9999999999999999999876 667778899
Q ss_pred cceeEEEEeCC
Q psy7058 75 KAITSLAFCDF 85 (85)
Q Consensus 75 ~~v~~~~~~~~ 85 (85)
..|.+++|+|.
T Consensus 100 ~~V~~v~~sp~ 110 (753)
T 3jro_A 100 ASVNSVQWAPH 110 (753)
T ss_dssp SCEEEEEECCG
T ss_pred CCeEEEEECCC
Confidence 99999999873
No 95
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.70 E-value=1.6e-16 Score=82.84 Aligned_cols=85 Identities=20% Similarity=0.321 Sum_probs=70.3
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeee----ccCCCcEEEEEecCCCC-EEEEEcCCCeEEEEEcCCc-----------
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELG----TANQRWVWDAAFTLDSK-FLLTASSDGVARLWNIETG----------- 64 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~----~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~~~~~~----------- 64 (85)
++++++++.|+.+++||+++++....+. ..+...+.++.|+|++. ++++++.|+.|++||++.+
T Consensus 224 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~ 303 (357)
T 3i2n_A 224 MNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGI 303 (357)
T ss_dssp CCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSC
T ss_pred CCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCC
Confidence 4678999999999999998776654443 13778899999999998 8999999999999999754
Q ss_pred --------cccccccccccceeEEEEeCC
Q psy7058 65 --------EVDKEYSGHQKAITSLAFCDF 85 (85)
Q Consensus 65 --------~~~~~~~~~~~~v~~~~~~~~ 85 (85)
+.+..+..|...|.+++|+|.
T Consensus 304 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~ 332 (357)
T 3i2n_A 304 EMGVAGSVSLLQNVTLSTQPISSLDWSPD 332 (357)
T ss_dssp CCCCCCEEEEEEEEECCSSCEEEEEECSS
T ss_pred ccccccccceeeccccCCCCeeEEEEcCC
Confidence 245567788999999999874
No 96
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.69 E-value=1.1e-15 Score=89.74 Aligned_cols=84 Identities=26% Similarity=0.392 Sum_probs=76.8
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecC--CCCEEEEEcCCCeEEEEEcCCcccccccccccccee
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTL--DSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAIT 78 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~ 78 (85)
|+++++++.|+.|++||+.+++....+.. +...+.++.|++ ++..+++++.|+.|++||+.+++....+.+|...|.
T Consensus 669 ~~~l~s~~~d~~v~vwd~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~ 747 (1249)
T 3sfz_A 669 DSYIATCSADKKVKIWDSATGKLVHTYDE-HSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVN 747 (1249)
T ss_dssp SSEEEEEETTSEEEEEETTTCCEEEEEEC-CSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEE
T ss_pred CCEEEEEeCCCeEEEEECCCCceEEEEcC-CCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEE
Confidence 46899999999999999999999888877 888899999999 556899999999999999999999999999999999
Q ss_pred EEEEeCC
Q psy7058 79 SLAFCDF 85 (85)
Q Consensus 79 ~~~~~~~ 85 (85)
+++|+|.
T Consensus 748 ~~~~sp~ 754 (1249)
T 3sfz_A 748 HCRFSPD 754 (1249)
T ss_dssp EEEECSS
T ss_pred EEEEecC
Confidence 9999873
No 97
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.69 E-value=9.7e-16 Score=81.01 Aligned_cols=83 Identities=23% Similarity=0.264 Sum_probs=73.8
Q ss_pred eeEEeeCCCcEEEeeCCCceeeeeeecc--C---CCcEEEEEecCCCCEEEEEcCC---CeEEEEEcCCccccccccc--
Q psy7058 3 LLATTSADQTARIWNTEDFSLVRELGTA--N---QRWVWDAAFTLDSKFLLTASSD---GVARLWNIETGEVDKEYSG-- 72 (85)
Q Consensus 3 ~l~~~~~~~~i~~~d~~~~~~~~~~~~~--~---~~~~~~~~~~~~~~~~~~~~~~---~~i~~~~~~~~~~~~~~~~-- 72 (85)
++++++.|+.+++||+++++....+... + ...+.+++|+|++.++++++.+ +.|++||+++++.+..+..
T Consensus 199 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~ 278 (397)
T 1sq9_A 199 LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPT 278 (397)
T ss_dssp EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC-
T ss_pred eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCc
Confidence 6889999999999999998888777641 4 6779999999999999999999 9999999999998888888
Q ss_pred -----------cccceeEEEEeCC
Q psy7058 73 -----------HQKAITSLAFCDF 85 (85)
Q Consensus 73 -----------~~~~v~~~~~~~~ 85 (85)
|...|.+++|+|.
T Consensus 279 ~~~~~~~~~~~~~~~v~~~~~~~~ 302 (397)
T 1sq9_A 279 HSSQASLGEFAHSSWVMSLSFNDS 302 (397)
T ss_dssp -------CCBSBSSCEEEEEECSS
T ss_pred ccccccccccccCCcEEEEEECCC
Confidence 9999999999873
No 98
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.69 E-value=3.9e-16 Score=83.60 Aligned_cols=72 Identities=19% Similarity=0.254 Sum_probs=56.9
Q ss_pred ceeEEe--eCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccc
Q psy7058 2 GLLATT--SADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQ 74 (85)
Q Consensus 2 ~~l~~~--~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 74 (85)
+.++++ ..|+.|++||..+++.+..+.+ |...|.+++|+|+|.++++++.|++|++||+.+..+......+.
T Consensus 333 ~~lv~~sg~~d~~I~iwd~~~~~~v~~l~g-H~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~~~~~~~~~~~~ 406 (420)
T 4gga_A 333 KELISGHGFAQNQLVIWKYPTMAKVAELKG-HTSRVLSLTMSPDGATVASAAADETLRLWRCFELDPARRREREK 406 (420)
T ss_dssp TEEEEEECTTTCCEEEEETTTCCEEEEECC-CSSCEEEEEECTTSSCEEEEETTTEEEEECCSCSSCC-------
T ss_pred CeEEEEEecCCCEEEEEECCCCcEEEEEcC-CCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCCCccchhhhcc
Confidence 345544 3789999999999999998887 88899999999999999999999999999998766555544333
No 99
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.69 E-value=6.3e-16 Score=83.53 Aligned_cols=81 Identities=12% Similarity=0.080 Sum_probs=64.3
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccc-------cc
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSG-------HQ 74 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-------~~ 74 (85)
+++++++.|+.+++||++++........ +...+.+++|+|+|.++++++.|+.|++||++ ++....+.. |.
T Consensus 163 ~~las~s~Dg~v~iwD~~~~~~~~~~~~-~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~ 240 (434)
T 2oit_A 163 SMVAVCLADGSIAVLQVTETVKVCATLP-STVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHP 240 (434)
T ss_dssp TEEEEEETTSCEEEEEESSSEEEEEEEC-GGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSC
T ss_pred CEEEEEECCCeEEEEEcCCCcceeeccC-CCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCc
Confidence 5789999999999999998866555444 66789999999999999999999999999998 433333322 23
Q ss_pred cceeEEEEeC
Q psy7058 75 KAITSLAFCD 84 (85)
Q Consensus 75 ~~v~~~~~~~ 84 (85)
..+.+++|++
T Consensus 241 ~~v~~v~w~~ 250 (434)
T 2oit_A 241 VRVLDVLWIG 250 (434)
T ss_dssp EEEEEEEEEE
T ss_pred eeEEEEEEec
Confidence 3788888875
No 100
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.69 E-value=5.2e-16 Score=79.93 Aligned_cols=59 Identities=22% Similarity=0.302 Sum_probs=53.4
Q ss_pred EeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCcc
Q psy7058 6 TTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGE 65 (85)
Q Consensus 6 ~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 65 (85)
+++.|+.|++||+.+++.+..+.+ |...|++++|+|++.++++++.|+.|++||+.+..
T Consensus 259 sg~~d~~i~iwd~~~~~~~~~l~g-H~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~~d 317 (318)
T 4ggc_A 259 HGFAQNQLVIWKYPTMAKVAELKG-HTSRVLSLTMSPDGATVASAAADETLRLWRCFELD 317 (318)
T ss_dssp ECTTTCCEEEEETTTCCEEEEECC-CSSCEEEEEECTTSSCEEEEETTTEEEEECCSCCC
T ss_pred EEcCCCEEEEEECCCCcEEEEEcC-CCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCCC
Confidence 345899999999999999998887 88899999999999999999999999999997653
No 101
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.69 E-value=2.1e-16 Score=83.90 Aligned_cols=84 Identities=19% Similarity=0.338 Sum_probs=73.6
Q ss_pred ceeEEeeCCC---cEEEeeCCCc-eeeeeeeccCCCcEEEEEecC-CCCEEEEEcCCCeEEEEEcCCccccccccccccc
Q psy7058 2 GLLATTSADQ---TARIWNTEDF-SLVRELGTANQRWVWDAAFTL-DSKFLLTASSDGVARLWNIETGEVDKEYSGHQKA 76 (85)
Q Consensus 2 ~~l~~~~~~~---~i~~~d~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 76 (85)
.++++++.|+ .|++||++++ .+...+...+...+.+++|+| ++.++++++.|+.|++||+.+++.+..+..|...
T Consensus 228 ~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~ 307 (416)
T 2pm9_A 228 TRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNW 307 (416)
T ss_dssp TEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSC
T ss_pred CEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCc
Confidence 4788999998 9999999986 455555513778899999999 8999999999999999999999999999999999
Q ss_pred eeEEEEeCC
Q psy7058 77 ITSLAFCDF 85 (85)
Q Consensus 77 v~~~~~~~~ 85 (85)
|.+++|+|.
T Consensus 308 v~~~~~s~~ 316 (416)
T 2pm9_A 308 CFKTKFAPE 316 (416)
T ss_dssp CCCEEECTT
T ss_pred eEEEEECCC
Confidence 999999873
No 102
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.69 E-value=2.8e-15 Score=78.32 Aligned_cols=83 Identities=16% Similarity=0.273 Sum_probs=72.5
Q ss_pred CceeEEeeCCCcEEEeeCCC-ceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeE
Q psy7058 1 MGLLATTSADQTARIWNTED-FSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITS 79 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~ 79 (85)
++++++++.|+.|++||+.+ .+....+.. +...+.++.|+|++.++++++.++.|++||+++++....+. +...+..
T Consensus 187 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~~~~ 264 (369)
T 3zwl_B 187 GKYIIAGHKDGKISKYDVSNNYEYVDSIDL-HEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYE-TDCPLNT 264 (369)
T ss_dssp GCEEEEEETTSEEEEEETTTTTEEEEEEEC-CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE-CSSCEEE
T ss_pred CCEEEEEcCCCEEEEEECCCCcEeEEEEec-CCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeec-CCCCcee
Confidence 35789999999999999998 666666666 77889999999999999999999999999999988887777 7788888
Q ss_pred EEEeCC
Q psy7058 80 LAFCDF 85 (85)
Q Consensus 80 ~~~~~~ 85 (85)
++|+|.
T Consensus 265 ~~~~~~ 270 (369)
T 3zwl_B 265 AVITPL 270 (369)
T ss_dssp EEECSS
T ss_pred EEecCC
Confidence 888763
No 103
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.68 E-value=1.3e-15 Score=81.48 Aligned_cols=84 Identities=17% Similarity=0.247 Sum_probs=66.2
Q ss_pred CceeEEeeCCCcEEEeeCCCc-eeeeee------eccCCCcEEEEEecCCC-CEEEEEcCCCeEEEEEcCCccc----cc
Q psy7058 1 MGLLATTSADQTARIWNTEDF-SLVREL------GTANQRWVWDAAFTLDS-KFLLTASSDGVARLWNIETGEV----DK 68 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~-~~~~~~------~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~----~~ 68 (85)
|++++++ .|+.|++||+.+. +....+ ...+...+.+++|+|++ ..+++++.|+.|++||+++++. ..
T Consensus 189 ~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 267 (447)
T 3dw8_B 189 YETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSK 267 (447)
T ss_dssp SSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCE
T ss_pred CCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccceee
Confidence 4678888 7999999999844 333322 12377789999999998 9999999999999999998876 56
Q ss_pred ccccccc------------ceeEEEEeCC
Q psy7058 69 EYSGHQK------------AITSLAFCDF 85 (85)
Q Consensus 69 ~~~~~~~------------~v~~~~~~~~ 85 (85)
.+..|.. .|.+++|+|.
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~ 296 (447)
T 3dw8_B 268 LFEEPEDPSNRSFFSEIISSISDVKFSHS 296 (447)
T ss_dssp EECCC-----CCHHHHHTTCEEEEEECTT
T ss_pred EeccCCCccccccccccCceEEEEEECCC
Confidence 6777765 8999999874
No 104
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.68 E-value=4.9e-16 Score=81.97 Aligned_cols=59 Identities=15% Similarity=0.051 Sum_probs=50.9
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccCCCc-EEEEEecCCCCEEEEEcCCCeEEEEEc
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTANQRW-VWDAAFTLDSKFLLTASSDGVARLWNI 61 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~ 61 (85)
.++++++.|++|++||+.+++....+.+ |... +..++|+|+|+++++++.|++|++||+
T Consensus 296 ~~lASgS~DgTIkIWDl~tGk~l~tL~g-H~~~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 296 HCAAAILTSGTIAIWDLLLGQCTALLPP-VSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp TEEEEEETTSCEEEEETTTCSEEEEECC-C--CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred CEEEEEcCCCcEEEEECCCCcEEEEecC-CCCCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 3578999999999999999999998876 5443 456899999999999999999999995
No 105
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.68 E-value=2.5e-15 Score=79.38 Aligned_cols=82 Identities=16% Similarity=0.191 Sum_probs=69.5
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeec--cCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeE
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGT--ANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITS 79 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~ 79 (85)
+++++++.|+.+++||+.+ .....+.. .+...+.+++|+|++..+++++.|+.|++||+ .++.+..+..|...|.+
T Consensus 132 ~~l~s~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~~ 209 (383)
T 3ei3_B 132 NQLFVSSIRGATTLRDFSG-SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVTH 209 (383)
T ss_dssp EEEEEEETTTEEEEEETTS-CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEECSSSCEEE
T ss_pred CEEEEEeCCCEEEEEECCC-CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEeccCCCcEEE
Confidence 5789999999999999986 44444433 13467999999999999999999999999999 57778888889999999
Q ss_pred EEEeCC
Q psy7058 80 LAFCDF 85 (85)
Q Consensus 80 ~~~~~~ 85 (85)
++|+|.
T Consensus 210 ~~~~~~ 215 (383)
T 3ei3_B 210 AEFNPR 215 (383)
T ss_dssp EEECSS
T ss_pred EEECCC
Confidence 999874
No 106
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.67 E-value=1.7e-15 Score=79.88 Aligned_cols=64 Identities=30% Similarity=0.342 Sum_probs=58.3
Q ss_pred CceeEEeeCCCc-EEEeeCCCceeeeeeecc-CCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCc
Q psy7058 1 MGLLATTSADQT-ARIWNTEDFSLVRELGTA-NQRWVWDAAFTLDSKFLLTASSDGVARLWNIETG 64 (85)
Q Consensus 1 g~~l~~~~~~~~-i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 64 (85)
|++|++++.|+. +++||+.+++....+..+ |...+.+++|+|++.++++++.|+.|++||+...
T Consensus 207 g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~ 272 (355)
T 3vu4_A 207 SDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFND 272 (355)
T ss_dssp SSEEEEEETTCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCC
T ss_pred CCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCC
Confidence 568999999998 999999999999888743 7788999999999999999999999999999754
No 107
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.67 E-value=3.8e-15 Score=77.30 Aligned_cols=83 Identities=30% Similarity=0.560 Sum_probs=66.0
Q ss_pred CceeEEeeCCCcEEEeeCCCce-----eeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCcccccccccccc
Q psy7058 1 MGLLATTSADQTARIWNTEDFS-----LVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQK 75 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 75 (85)
+++|++|+.|+.|++||+.+.+ +...+.+ |...|.++.|+|++.++++++.|+.+++|+............+..
T Consensus 51 ~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~-h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~ 129 (340)
T 4aow_A 51 PDMILSASRDKTIIMWKLTRDETNYGIPQRALRG-HSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTK 129 (340)
T ss_dssp TTEEEEEETTSCEEEEEECCSSSCSEEEEEEECC-CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSS
T ss_pred CCEEEEEcCCCeEEEEECCCCCcccceeeEEEeC-CCCCEEEEEECCCCCEEEEEcccccceEEeecccceeeeecCCCC
Confidence 3689999999999999987643 2334444 788899999999999999999999999999988776666665666
Q ss_pred ceeEEEEeC
Q psy7058 76 AITSLAFCD 84 (85)
Q Consensus 76 ~v~~~~~~~ 84 (85)
.+..+.+++
T Consensus 130 ~~~~~~~~~ 138 (340)
T 4aow_A 130 DVLSVAFSS 138 (340)
T ss_dssp CEEEEEECT
T ss_pred ceeEEEEee
Confidence 666655544
No 108
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.67 E-value=2.6e-15 Score=80.98 Aligned_cols=69 Identities=17% Similarity=0.264 Sum_probs=60.7
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCcccccccc
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYS 71 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 71 (85)
++|++++.|+.|++||+.+++....+...+...+.+++|+ ++.++++++.|+.|++||+.+++.+..+.
T Consensus 211 ~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~ 279 (450)
T 2vdu_B 211 QFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFD 279 (450)
T ss_dssp EEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEE
T ss_pred cEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeec
Confidence 5799999999999999998888777554488889999999 99999999999999999999888766654
No 109
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.67 E-value=6e-16 Score=83.22 Aligned_cols=83 Identities=17% Similarity=0.231 Sum_probs=67.7
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCC-EEEEEcCCCeEEEEEcCCcccccc---ccccccc
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSK-FLLTASSDGVARLWNIETGEVDKE---YSGHQKA 76 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~---~~~~~~~ 76 (85)
+++|++++.|+.|++||+.. +.+..+.. |...|.+++|+|++. ++++++.|+.|++||++..+.... ..+|...
T Consensus 221 ~~~l~~g~~dg~i~~wd~~~-~~~~~~~~-h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~ 298 (435)
T 4e54_B 221 SRMVVTGDNVGNVILLNMDG-KELWNLRM-HKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHP 298 (435)
T ss_dssp TTEEEEECSSSBEEEEESSS-CBCCCSBC-CSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSC
T ss_pred CCEEEEEeCCCcEeeeccCc-ceeEEEec-ccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeecccc
Confidence 46789999999999999874 45555555 788899999999875 788999999999999987764433 3568899
Q ss_pred eeEEEEeCC
Q psy7058 77 ITSLAFCDF 85 (85)
Q Consensus 77 v~~~~~~~~ 85 (85)
|++++|+|.
T Consensus 299 v~~~~~spd 307 (435)
T 4e54_B 299 VNAACFSPD 307 (435)
T ss_dssp EEECCBCTT
T ss_pred ccceeECCC
Confidence 999999873
No 110
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.67 E-value=2.6e-16 Score=85.02 Aligned_cols=85 Identities=11% Similarity=0.051 Sum_probs=67.6
Q ss_pred CceeE----EeeCCCcEEEeeCCCc--------eeeeee--eccCCCcEEEEEecCC-CCEEEEEcCCCeEEEEEcCCcc
Q psy7058 1 MGLLA----TTSADQTARIWNTEDF--------SLVREL--GTANQRWVWDAAFTLD-SKFLLTASSDGVARLWNIETGE 65 (85)
Q Consensus 1 g~~l~----~~~~~~~i~~~d~~~~--------~~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~ 65 (85)
|++|+ +++.|+.|++||+.+. ++...+ ...|...+.+++|+|+ +..+++++.|+.|++||++++.
T Consensus 104 g~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~ 183 (434)
T 2oit_A 104 NLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETV 183 (434)
T ss_dssp SCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSE
T ss_pred CCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCc
Confidence 45677 7889999999998765 221112 1236778999999997 8899999999999999999887
Q ss_pred ccccccccccceeEEEEeCC
Q psy7058 66 VDKEYSGHQKAITSLAFCDF 85 (85)
Q Consensus 66 ~~~~~~~~~~~v~~~~~~~~ 85 (85)
.......|...|.+++|+|.
T Consensus 184 ~~~~~~~~~~~v~~v~wspd 203 (434)
T 2oit_A 184 KVCATLPSTVAVTSVCWSPK 203 (434)
T ss_dssp EEEEEECGGGCEEEEEECTT
T ss_pred ceeeccCCCCceeEEEEcCC
Confidence 66666678899999999974
No 111
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.67 E-value=3.5e-15 Score=80.20 Aligned_cols=81 Identities=27% Similarity=0.555 Sum_probs=73.1
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEE
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSL 80 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~ 80 (85)
++++++++.|+.+++||+.+++....+.. +...+.++.+ ++..+++++.|+.|++||+++++.+..+.+|...|.++
T Consensus 266 ~~~l~s~~~dg~i~vwd~~~~~~~~~~~~-~~~~v~~~~~--~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~ 342 (435)
T 1p22_A 266 DKYIVSASGDRTIKVWNTSTCEFVRTLNG-HKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCI 342 (435)
T ss_dssp TTEEEEEETTSEEEEEETTTCCEEEEEEC-CSSCEEEEEE--ETTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEE
T ss_pred CCEEEEEeCCCeEEEEECCcCcEEEEEcC-CCCcEEEEEe--CCCEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEE
Confidence 46899999999999999999998888876 7778999888 57899999999999999999999999999999999999
Q ss_pred EEeC
Q psy7058 81 AFCD 84 (85)
Q Consensus 81 ~~~~ 84 (85)
+|++
T Consensus 343 ~~~~ 346 (435)
T 1p22_A 343 RFDN 346 (435)
T ss_dssp ECCS
T ss_pred EecC
Confidence 8854
No 112
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.66 E-value=2.1e-15 Score=78.42 Aligned_cols=82 Identities=10% Similarity=0.053 Sum_probs=68.8
Q ss_pred CceeEEeeCCCcEEEeeCCCce---eeeeeeccCCCcEEEEEecCCCC-EEEEEcCCCeEEEEEc-CCccccccccc--c
Q psy7058 1 MGLLATTSADQTARIWNTEDFS---LVRELGTANQRWVWDAAFTLDSK-FLLTASSDGVARLWNI-ETGEVDKEYSG--H 73 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~---~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~~~-~~~~~~~~~~~--~ 73 (85)
+++|++++.|+.|++||+.++. ....... +...+.+++|+|++. .+++++.++.|++|++ ..++. ..+.. |
T Consensus 23 ~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~-~~~~~~~~ 100 (342)
T 1yfq_A 23 KSLLLITSWDGSLTVYKFDIQAKNVDLLQSLR-YKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSF-QALTNNEA 100 (342)
T ss_dssp GTEEEEEETTSEEEEEEEETTTTEEEEEEEEE-CSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSE-EECBSCCC
T ss_pred CCEEEEEcCCCeEEEEEeCCCCccccceeeee-cCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCce-EeccccCC
Confidence 4678999999999999998766 2333333 778899999999999 9999999999999999 76654 66777 9
Q ss_pred ccceeEEEEeC
Q psy7058 74 QKAITSLAFCD 84 (85)
Q Consensus 74 ~~~v~~~~~~~ 84 (85)
...|.+++|+|
T Consensus 101 ~~~v~~l~~~~ 111 (342)
T 1yfq_A 101 NLGICRICKYG 111 (342)
T ss_dssp CSCEEEEEEET
T ss_pred CCceEEEEeCC
Confidence 99999999986
No 113
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.66 E-value=1.4e-16 Score=85.27 Aligned_cols=73 Identities=15% Similarity=0.250 Sum_probs=60.5
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEec----CCCCEEEEEcCCCeEEEEEcCCcccccccccc
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFT----LDSKFLLTASSDGVARLWNIETGEVDKEYSGH 73 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 73 (85)
+++|++++.|+.|++||+++++....+...+...+.++.++ +++.++++++.|+.|++||+++++.+..+.+|
T Consensus 226 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 302 (437)
T 3gre_A 226 CCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINS 302 (437)
T ss_dssp SCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESS
T ss_pred CCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcC
Confidence 46799999999999999999988887764466789999665 46779999999999999999988766655543
No 114
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.66 E-value=1.2e-15 Score=81.65 Aligned_cols=64 Identities=17% Similarity=0.274 Sum_probs=52.7
Q ss_pred CceeEEeeCCCcEEEeeCCCce-----------eeeeeeccCC------------CcEEEEEecCCC--CEEEEEcCCCe
Q psy7058 1 MGLLATTSADQTARIWNTEDFS-----------LVRELGTANQ------------RWVWDAAFTLDS--KFLLTASSDGV 55 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~-----------~~~~~~~~~~------------~~~~~~~~~~~~--~~~~~~~~~~~ 55 (85)
|++|++|+.|+.|++||+.+++ ....+.. |. ..|.+++|+|++ ..+++++.|+.
T Consensus 40 g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~-h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~l~s~s~d~~ 118 (447)
T 3dw8_B 40 GELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQS-HEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTNDKT 118 (447)
T ss_dssp SSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEEC-CCCEEEGGGTEEECCCCCEEEECCCCSSSEEEEEECSSC
T ss_pred CCEEEEEcCCCeEEEEEecCCCCCCcccccceeEeccccc-ccccccccccccccCceEEEEEcCCCCcceEEEeCCCCe
Confidence 5789999999999999998766 3455554 65 779999999998 78999999999
Q ss_pred EEEEEcCCcc
Q psy7058 56 ARLWNIETGE 65 (85)
Q Consensus 56 i~~~~~~~~~ 65 (85)
|++|++..+.
T Consensus 119 i~iw~~~~~~ 128 (447)
T 3dw8_B 119 IKLWKISERD 128 (447)
T ss_dssp EEEEEEEEEE
T ss_pred EEEEeccccc
Confidence 9999987643
No 115
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.66 E-value=3e-15 Score=80.47 Aligned_cols=82 Identities=18% Similarity=0.384 Sum_probs=68.6
Q ss_pred eeEEeeCCCcEEEeeCCC-ceeeeeeeccCCCcEEEEEecCCCC-EEEEEcCCCeEEEEEcCC--------------ccc
Q psy7058 3 LLATTSADQTARIWNTED-FSLVRELGTANQRWVWDAAFTLDSK-FLLTASSDGVARLWNIET--------------GEV 66 (85)
Q Consensus 3 ~l~~~~~~~~i~~~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~~~~~--------------~~~ 66 (85)
++++++.|+.|++||+++ ..+...+.. +...+.++.|+|++. ++++++.|+.|++||+.. ...
T Consensus 292 ~l~tg~~dg~v~vwd~~~~~~~~~~~~~-h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~ 370 (430)
T 2xyi_A 292 ILATGSADKTVALWDLRNLKLKLHSFES-HKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPEL 370 (430)
T ss_dssp EEEEEETTSEEEEEETTCTTSCSEEEEC-CSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTE
T ss_pred EEEEEeCCCeEEEEeCCCCCCCeEEeec-CCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcce
Confidence 588999999999999997 455666665 778899999999884 689999999999999986 244
Q ss_pred cccccccccceeEEEEeCC
Q psy7058 67 DKEYSGHQKAITSLAFCDF 85 (85)
Q Consensus 67 ~~~~~~~~~~v~~~~~~~~ 85 (85)
+..+.+|...|++++|+|.
T Consensus 371 ~~~~~~h~~~v~~~~~~p~ 389 (430)
T 2xyi_A 371 LFIHGGHTAKISDFSWNPN 389 (430)
T ss_dssp EEECCCCSSCEEEEEECSS
T ss_pred EEEcCCCCCCceEEEECCC
Confidence 5566788899999999874
No 116
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.66 E-value=7.5e-15 Score=77.62 Aligned_cols=83 Identities=17% Similarity=0.257 Sum_probs=69.7
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCC-EEEEEcCCCeEEEEEcCCcc-cccc----------
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSK-FLLTASSDGVARLWNIETGE-VDKE---------- 69 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~-~~~~---------- 69 (85)
.++++++.++.+++||+.+++....+.. +...+.++.|+|++. .+++++.|+.|++||++... ....
T Consensus 157 ~~~~~~~~~~~v~~~d~~~~~~~~~~~~-~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~ 235 (408)
T 4a11_B 157 CLVAVGTRGPKVQLCDLKSGSCSHILQG-HRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQ 235 (408)
T ss_dssp CEEEEEESSSSEEEEESSSSCCCEEECC-CCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCC
T ss_pred cEEEEEcCCCeEEEEeCCCcceeeeecC-CCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccce
Confidence 4789999999999999999888887776 778899999999988 58899999999999997654 2222
Q ss_pred -----ccccccceeEEEEeCC
Q psy7058 70 -----YSGHQKAITSLAFCDF 85 (85)
Q Consensus 70 -----~~~~~~~v~~~~~~~~ 85 (85)
...|...|.+++|+|.
T Consensus 236 ~~~~~~~~~~~~v~~~~~~~~ 256 (408)
T 4a11_B 236 AVESANTAHNGKVNGLCFTSD 256 (408)
T ss_dssp CTTTSSCSCSSCEEEEEECTT
T ss_pred eeccccccccCceeEEEEcCC
Confidence 2568889999999873
No 117
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.66 E-value=4.7e-15 Score=78.74 Aligned_cols=83 Identities=20% Similarity=0.368 Sum_probs=72.1
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccC-----CCcEEEEEecCCC-CEEEEEcCCC---eEEEEEcCCc-ccccccc
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTAN-----QRWVWDAAFTLDS-KFLLTASSDG---VARLWNIETG-EVDKEYS 71 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~-----~~~~~~~~~~~~~-~~~~~~~~~~---~i~~~~~~~~-~~~~~~~ 71 (85)
.++++++.|+.|++||+.+++....+.... ...+.++.|+|++ ..+++++.++ .|++||++.+ .+...+.
T Consensus 179 ~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~ 258 (416)
T 2pm9_A 179 HVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLN 258 (416)
T ss_dssp TEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCC
T ss_pred cEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEee
Confidence 578999999999999999988887776522 6789999999987 6899999998 9999999986 5667777
Q ss_pred -ccccceeEEEEeC
Q psy7058 72 -GHQKAITSLAFCD 84 (85)
Q Consensus 72 -~~~~~v~~~~~~~ 84 (85)
+|...|.+++|+|
T Consensus 259 ~~~~~~v~~~~~s~ 272 (416)
T 2pm9_A 259 QGHQKGILSLDWCH 272 (416)
T ss_dssp SCCSSCEEEEEECS
T ss_pred cCccCceeEEEeCC
Confidence 8999999999987
No 118
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.66 E-value=4.6e-16 Score=82.89 Aligned_cols=64 Identities=16% Similarity=0.151 Sum_probs=55.1
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCC-CEEEEEcCCCeEEEEEcCCccc
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDS-KFLLTASSDGVARLWNIETGEV 66 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~ 66 (85)
++|++++.|+++++||+.++........ +...+.+++|+|++ .++++++.|+.|++||++.++.
T Consensus 157 ~~las~s~D~tv~~Wd~~~~~~~~~~~~-~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~ 221 (393)
T 4gq1_A 157 QVIASVGDDCTLIIWRLTDEGPILAGYP-LSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLS 221 (393)
T ss_dssp EEEEEEETTSEEEEEEEETTEEEEEEEE-CSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC-
T ss_pred CEEEEEECCCeEEEEECCCCceeeeecC-CCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcc
Confidence 5799999999999999988877776666 67789999999987 4799999999999999987654
No 119
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.65 E-value=5.1e-15 Score=79.88 Aligned_cols=85 Identities=13% Similarity=0.130 Sum_probs=71.9
Q ss_pred Ccee-EEeeCCCcEEEeeCC--Cceeeeeeec-cCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccc----cccc
Q psy7058 1 MGLL-ATTSADQTARIWNTE--DFSLVRELGT-ANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDK----EYSG 72 (85)
Q Consensus 1 g~~l-~~~~~~~~i~~~d~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~----~~~~ 72 (85)
|++| ++++.|+.+++||+. +++....+.. .+...+.+++|+|++.++++++.++.+++|++.++.... .+.+
T Consensus 114 ~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~ 193 (450)
T 2vdu_B 114 ESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSIDINSIPEEKFTQEPILG 193 (450)
T ss_dssp SSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCCCSSCCCCCSEE
T ss_pred CCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEecCCcccccccceeeec
Confidence 3554 889999999999998 7777776653 256779999999999999999999999999998876554 7778
Q ss_pred cccceeEEEEeCC
Q psy7058 73 HQKAITSLAFCDF 85 (85)
Q Consensus 73 ~~~~v~~~~~~~~ 85 (85)
|...|++++|+|.
T Consensus 194 h~~~v~~~~~sp~ 206 (450)
T 2vdu_B 194 HVSMLTDVHLIKD 206 (450)
T ss_dssp CSSCEEEEEEEEC
T ss_pred ccCceEEEEEcCC
Confidence 9999999999984
No 120
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.65 E-value=3.6e-15 Score=77.52 Aligned_cols=80 Identities=25% Similarity=0.295 Sum_probs=69.1
Q ss_pred CceeEEeeCCCcEEEeeCCCc------eeeeeeeccCC---------CcEEEEEecCCCCEEEEEcCCCeEEEEEcCCcc
Q psy7058 1 MGLLATTSADQTARIWNTEDF------SLVRELGTANQ---------RWVWDAAFTLDSKFLLTASSDGVARLWNIETGE 65 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~------~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 65 (85)
++++++++.|+.+++|++... +....+.. +. ..+.+++|+|++.++++++.|+.|++||+.+++
T Consensus 206 ~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~ 284 (342)
T 1yfq_A 206 QEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRC-HRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRK 284 (342)
T ss_dssp GCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEEC-CCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTE
T ss_pred CCEEEEEecCCcEEEEEEcCCCcccccccceeeec-ccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHh
Confidence 367899999999999999876 55555554 43 389999999999999999999999999999999
Q ss_pred cccccccc-ccceeEEE
Q psy7058 66 VDKEYSGH-QKAITSLA 81 (85)
Q Consensus 66 ~~~~~~~~-~~~v~~~~ 81 (85)
.+..+..| ...|.+++
T Consensus 285 ~~~~~~~~h~~~v~~~~ 301 (342)
T 1yfq_A 285 KIKNFAKFNEDSVVKIA 301 (342)
T ss_dssp EEEECCCCSSSEEEEEE
T ss_pred HhhhhhcccCCCceEec
Confidence 99899888 89998887
No 121
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.65 E-value=5.6e-15 Score=84.04 Aligned_cols=83 Identities=20% Similarity=0.239 Sum_probs=70.2
Q ss_pred CceeEEeeCCCcEEEeeCCCce--eeeeeeccCCCcEEEEEecCC--CCEEEEEcCCCeEEEEEcCCcc--ccccccccc
Q psy7058 1 MGLLATTSADQTARIWNTEDFS--LVRELGTANQRWVWDAAFTLD--SKFLLTASSDGVARLWNIETGE--VDKEYSGHQ 74 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~--~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~ 74 (85)
++++++++.|+.|++||+.+++ ....... +...+.++.|+|+ +..+++++.|+.|++||++... ....+..|.
T Consensus 67 ~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~-h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~ 145 (753)
T 3jro_A 67 GTILASCSYDGKVLIWKEENGRWSQIAVHAV-HSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHA 145 (753)
T ss_dssp CSEEEEEETTSCEEEEEEETTEEEEEEEECC-CSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCS
T ss_pred CCEEEEEeCCCeEEEEECCCCcccccccccC-CCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCC
Confidence 4689999999999999999876 4444444 7788999999999 9999999999999999998773 334566788
Q ss_pred cceeEEEEeC
Q psy7058 75 KAITSLAFCD 84 (85)
Q Consensus 75 ~~v~~~~~~~ 84 (85)
..|.+++|+|
T Consensus 146 ~~v~~l~~~p 155 (753)
T 3jro_A 146 IGVNSASWAP 155 (753)
T ss_dssp SCEEEEEECC
T ss_pred CceEEEEecC
Confidence 9999999987
No 122
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.62 E-value=7.3e-15 Score=81.65 Aligned_cols=81 Identities=14% Similarity=0.205 Sum_probs=65.4
Q ss_pred CceeEEeeCCCcEEEeeCCCcee-------eeeee---ccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCcccc---
Q psy7058 1 MGLLATTSADQTARIWNTEDFSL-------VRELG---TANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVD--- 67 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~-------~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--- 67 (85)
|++|++|+.|+.|++||+.+++. ...+. .+|...|.+++|+|+| +++++.|+.+++|++......
T Consensus 141 G~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~ 218 (588)
T 2j04_A 141 ESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVS 218 (588)
T ss_dssp SSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCE
T ss_pred CCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccce
Confidence 67899999999999999988752 44543 3366789999999999 788889999999999876632
Q ss_pred ccc-cccccceeEEEEe
Q psy7058 68 KEY-SGHQKAITSLAFC 83 (85)
Q Consensus 68 ~~~-~~~~~~v~~~~~~ 83 (85)
..+ .+|...|.+++|+
T Consensus 219 ~tL~~~h~~~V~svaFs 235 (588)
T 2j04_A 219 RMIQNASRRKITDLKIV 235 (588)
T ss_dssp EEEECCCSSCCCCEEEE
T ss_pred eeecccccCcEEEEEEE
Confidence 345 3677899999986
No 123
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.61 E-value=5.1e-14 Score=74.44 Aligned_cols=82 Identities=15% Similarity=0.355 Sum_probs=72.2
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCC---CCEEEEEcCCCeEEEEEcCCcccccccccccccee
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLD---SKFLLTASSDGVARLWNIETGEVDKEYSGHQKAIT 78 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~ 78 (85)
+++++++.|+.+++||+.+++....+. +...+..+.+++. +..+++++.++.|++||+.+++....+..|...|.
T Consensus 113 ~~l~s~~~d~~i~iwd~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~ 190 (408)
T 4a11_B 113 GMFTSSSFDKTLKVWDTNTLQTADVFN--FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEIL 190 (408)
T ss_dssp TCEEEEETTSEEEEEETTTTEEEEEEE--CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEE
T ss_pred cEEEEEeCCCeEEEeeCCCCccceecc--CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEE
Confidence 578999999999999999988877776 4556889999884 45999999999999999999998889999999999
Q ss_pred EEEEeCC
Q psy7058 79 SLAFCDF 85 (85)
Q Consensus 79 ~~~~~~~ 85 (85)
+++|+|.
T Consensus 191 ~~~~~~~ 197 (408)
T 4a11_B 191 AVSWSPR 197 (408)
T ss_dssp EEEECSS
T ss_pred EEEECCC
Confidence 9999873
No 124
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.60 E-value=4e-14 Score=76.18 Aligned_cols=79 Identities=22% Similarity=0.444 Sum_probs=45.1
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEEE
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSLA 81 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~ 81 (85)
+++++++.|+.+++||+.+++....+.. +...+.++.+ ++..+++++.|+.|++||+++++.+..+..|...+.++.
T Consensus 250 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~-~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~ 326 (445)
T 2ovr_B 250 RRVVSGAYDFMVKVWDPETETCLHTLQG-HTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGME 326 (445)
T ss_dssp SCEEEEETTSCEEEEEGGGTEEEEEECC-CSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEE
T ss_pred CEEEEEcCCCEEEEEECCCCcEeEEecC-CCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEE
Confidence 3455556666666666555555555543 4445555555 555666666666666666666555555555555555555
Q ss_pred Ee
Q psy7058 82 FC 83 (85)
Q Consensus 82 ~~ 83 (85)
++
T Consensus 327 ~~ 328 (445)
T 2ovr_B 327 LK 328 (445)
T ss_dssp EE
T ss_pred Ee
Confidence 43
No 125
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.54 E-value=1.1e-13 Score=74.01 Aligned_cols=84 Identities=10% Similarity=0.050 Sum_probs=71.1
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeec----cCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccce
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGT----ANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAI 77 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v 77 (85)
.++++++.++.|++||+.+++....... .+...+.++.|++++..+++++.++.|++||+.+++....+..+...+
T Consensus 135 ~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~ 214 (433)
T 3bws_A 135 RLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWS 214 (433)
T ss_dssp EEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSE
T ss_pred eEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCe
Confidence 4567778888999999998887763321 366789999999999999999999999999999988888888888899
Q ss_pred eEEEEeCC
Q psy7058 78 TSLAFCDF 85 (85)
Q Consensus 78 ~~~~~~~~ 85 (85)
.+++|+|.
T Consensus 215 ~~~~~~~~ 222 (433)
T 3bws_A 215 KILLYDPI 222 (433)
T ss_dssp EEEEEETT
T ss_pred eEEEEcCC
Confidence 99999873
No 126
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.53 E-value=5.2e-13 Score=70.66 Aligned_cols=80 Identities=8% Similarity=0.039 Sum_probs=67.1
Q ss_pred eeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEE-EEEcCCCeEEEEEcCCccccccccccccceeEEE
Q psy7058 3 LLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFL-LTASSDGVARLWNIETGEVDKEYSGHQKAITSLA 81 (85)
Q Consensus 3 ~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~ 81 (85)
.+++++.|+.|++||+.+++....+.. + ..+.++.|+|++..+ ++++.++.|++||+.+++....+..+. .+.+++
T Consensus 4 l~vs~~~d~~v~v~d~~~~~~~~~~~~-~-~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~~ 80 (391)
T 1l0q_A 4 AYIANSESDNISVIDVTSNKVTATIPV-G-SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVA 80 (391)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEEEC-S-SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEE
T ss_pred EEEEcCCCCEEEEEECCCCeEEEEeec-C-CCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-CccceE
Confidence 567888999999999999988887765 3 348999999999876 677789999999999998887777444 889999
Q ss_pred EeCC
Q psy7058 82 FCDF 85 (85)
Q Consensus 82 ~~~~ 85 (85)
|+|.
T Consensus 81 ~spd 84 (391)
T 1l0q_A 81 VSPD 84 (391)
T ss_dssp ECTT
T ss_pred ECCC
Confidence 9873
No 127
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.48 E-value=2.1e-12 Score=69.12 Aligned_cols=83 Identities=5% Similarity=0.012 Sum_probs=68.1
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEE-EEcCCCeEEEEEcCCccccccccccccceeE
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL-TASSDGVARLWNIETGEVDKEYSGHQKAITS 79 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~ 79 (85)
|+++++++.|+.+++||+.+++....+.. +...+.+++|+|++..++ ++..++.|++||+.+++....+.. ...+..
T Consensus 181 ~~~~~s~~~d~~v~~~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~-~~~~~~ 258 (433)
T 3bws_A 181 NELWVSQMQANAVHVFDLKTLAYKATVDL-TGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDK-IGLPRG 258 (433)
T ss_dssp TEEEEEEGGGTEEEEEETTTCCEEEEEEC-SSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCC-CSEEEE
T ss_pred CEEEEEECCCCEEEEEECCCceEEEEEcC-CCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecC-CCCceE
Confidence 35788999999999999999888877775 667799999999998875 555799999999998887777764 345888
Q ss_pred EEEeCC
Q psy7058 80 LAFCDF 85 (85)
Q Consensus 80 ~~~~~~ 85 (85)
++|+|.
T Consensus 259 ~~~~~~ 264 (433)
T 3bws_A 259 LLLSKD 264 (433)
T ss_dssp EEECTT
T ss_pred EEEcCC
Confidence 888763
No 128
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.42 E-value=1.1e-11 Score=65.56 Aligned_cols=81 Identities=12% Similarity=0.086 Sum_probs=64.9
Q ss_pred cee-EEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEE-EEcCCCeEEEEEcCCccccccccccccceeE
Q psy7058 2 GLL-ATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL-TASSDGVARLWNIETGEVDKEYSGHQKAITS 79 (85)
Q Consensus 2 ~~l-~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~ 79 (85)
+++ ++++.++.|++||+.+++....+.. + ..+.+++|+|+++.++ ++..++.|++||+.+++....+.. ...+.+
T Consensus 44 ~~l~~~~~~d~~i~v~d~~~~~~~~~~~~-~-~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~-~~~~~~ 120 (391)
T 1l0q_A 44 TKVYVANAHSNDVSIIDTATNNVIATVPA-G-SSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKT-GKSPLG 120 (391)
T ss_dssp SEEEEEEGGGTEEEEEETTTTEEEEEEEC-S-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC-SSSEEE
T ss_pred CEEEEECCCCCeEEEEECCCCeEEEEEEC-C-CCccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeC-CCCcce
Confidence 444 6777899999999999988887775 3 3799999999999775 555679999999998887777663 456788
Q ss_pred EEEeCC
Q psy7058 80 LAFCDF 85 (85)
Q Consensus 80 ~~~~~~ 85 (85)
++|+|.
T Consensus 121 ~~~s~d 126 (391)
T 1l0q_A 121 LALSPD 126 (391)
T ss_dssp EEECTT
T ss_pred EEECCC
Confidence 888863
No 129
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.41 E-value=8.7e-12 Score=69.24 Aligned_cols=80 Identities=11% Similarity=0.104 Sum_probs=68.0
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEc--CCccccccccccccceeE
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNI--ETGEVDKEYSGHQKAITS 79 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~~~~v~~ 79 (85)
.++++++.++.|.+||..+++....+...+. +..+.++|+++++++++.++.|.+||+ .+++.+..+. +......
T Consensus 150 ~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~--~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~-~g~~p~~ 226 (543)
T 1nir_A 150 LFSVTLRDAGQIALVDGDSKKIVKVIDTGYA--VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIK-IGIEARS 226 (543)
T ss_dssp EEEEEEGGGTEEEEEETTTCCEEEEEECSTT--EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEE-CCSEEEE
T ss_pred EEEEEEcCCCeEEEEECCCceEEEEEecCcc--cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEe-cCCCcce
Confidence 4578888899999999999999888875333 789999999999999999999999999 7888777777 4556788
Q ss_pred EEEeC
Q psy7058 80 LAFCD 84 (85)
Q Consensus 80 ~~~~~ 84 (85)
++|+|
T Consensus 227 va~sp 231 (543)
T 1nir_A 227 VESSK 231 (543)
T ss_dssp EEECC
T ss_pred EEeCC
Confidence 99987
No 130
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.40 E-value=2.6e-11 Score=65.29 Aligned_cols=82 Identities=15% Similarity=0.135 Sum_probs=63.3
Q ss_pred CceeEEeeCCC---cEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEE-EEcCCC--eEEEEEcCCccccccccccc
Q psy7058 1 MGLLATTSADQ---TARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL-TASSDG--VARLWNIETGEVDKEYSGHQ 74 (85)
Q Consensus 1 g~~l~~~~~~~---~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~i~~~~~~~~~~~~~~~~~~ 74 (85)
|++|+.++.++ .|++||+.+++... +.. +...+.++.|+|+|+.++ +++.++ .|++||+.+++. ..+..+.
T Consensus 190 g~~la~~s~~~~~~~i~~~d~~tg~~~~-l~~-~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~ 266 (415)
T 2hqs_A 190 GSKLAYVTFESGRSALVIQTLANGAVRQ-VAS-FPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDGR 266 (415)
T ss_dssp SSEEEEEECTTSSCEEEEEETTTCCEEE-EEC-CSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EECCCCS
T ss_pred CCEEEEEEecCCCcEEEEEECCCCcEEE-eec-CCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE-EeCcCCC
Confidence 46788888775 89999999887653 333 556799999999999877 565554 599999987765 4556677
Q ss_pred cceeEEEEeCC
Q psy7058 75 KAITSLAFCDF 85 (85)
Q Consensus 75 ~~v~~~~~~~~ 85 (85)
..+.+++|+|.
T Consensus 267 ~~~~~~~~spd 277 (415)
T 2hqs_A 267 SNNTEPTWFPD 277 (415)
T ss_dssp SCEEEEEECTT
T ss_pred CcccceEECCC
Confidence 88999999874
No 131
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.38 E-value=1.9e-11 Score=65.84 Aligned_cols=80 Identities=11% Similarity=0.095 Sum_probs=61.7
Q ss_pred eeEEeeCC------CcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCC---eEEEEEcCCcccccccccc
Q psy7058 3 LLATTSAD------QTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDG---VARLWNIETGEVDKEYSGH 73 (85)
Q Consensus 3 ~l~~~~~~------~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~i~~~~~~~~~~~~~~~~~ 73 (85)
.++.++.+ +.|++||+... ....+.. +...+.+++|+|+|+.+++++.++ .|++||+.+++.. .+..+
T Consensus 145 ~l~~~s~~~~~~~~~~i~i~d~~g~-~~~~l~~-~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~-~l~~~ 221 (415)
T 2hqs_A 145 RIAYVVQTNGGQFPYELRVSDYDGY-NQFVVHR-SPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-QVASF 221 (415)
T ss_dssp EEEEEEECSSSSCCEEEEEEETTSC-SCEEEEE-ESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-EEECC
T ss_pred EEEEEEecCCCCccceEEEEcCCCC-CCEEEeC-CCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE-EeecC
Confidence 45555543 78999999754 3444444 667799999999999999988775 9999999988764 45557
Q ss_pred ccceeEEEEeCC
Q psy7058 74 QKAITSLAFCDF 85 (85)
Q Consensus 74 ~~~v~~~~~~~~ 85 (85)
...+.+++|+|.
T Consensus 222 ~~~~~~~~~spd 233 (415)
T 2hqs_A 222 PRHNGAPAFSPD 233 (415)
T ss_dssp SSCEEEEEECTT
T ss_pred CCcccCEEEcCC
Confidence 778999999984
No 132
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.31 E-value=4.1e-11 Score=70.39 Aligned_cols=83 Identities=8% Similarity=-0.051 Sum_probs=67.0
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCC----------CeEEEEEcCCccccccc
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSD----------GVARLWNIETGEVDKEY 70 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~i~~~~~~~~~~~~~~ 70 (85)
|++|++++.++.+++||+.+++....... +...+..+.|+|+|+++++++.+ +.|++||+..++ ...+
T Consensus 390 G~~la~~~~~~~v~~~d~~tg~~~~~~~~-~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l 467 (1045)
T 1k32_A 390 GKFAVVANDRFEIMTVDLETGKPTVIERS-REAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAA 467 (1045)
T ss_dssp SSEEEEEETTSEEEEEETTTCCEEEEEEC-SSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE-EEEC
T ss_pred CCEEEEECCCCeEEEEECCCCceEEeccC-CCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc-EEEe
Confidence 56789999999999999998887666544 66678899999999998877654 389999998776 5556
Q ss_pred cccccceeEEEEeCC
Q psy7058 71 SGHQKAITSLAFCDF 85 (85)
Q Consensus 71 ~~~~~~v~~~~~~~~ 85 (85)
..+...+..++|+|.
T Consensus 468 ~~~~~~~~~~~~spd 482 (1045)
T 1k32_A 468 TTENSHDYAPAFDAD 482 (1045)
T ss_dssp SCSSSBEEEEEECTT
T ss_pred eCCCcccCCceEcCC
Confidence 667777888888873
No 133
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.28 E-value=6.8e-11 Score=67.06 Aligned_cols=84 Identities=10% Similarity=0.031 Sum_probs=64.9
Q ss_pred CceeEEeeC-CC-----cEEEeeCCCceeeeeeecc-CC----------------------CcEEEEEecCCCCEEEEEc
Q psy7058 1 MGLLATTSA-DQ-----TARIWNTEDFSLVRELGTA-NQ----------------------RWVWDAAFTLDSKFLLTAS 51 (85)
Q Consensus 1 g~~l~~~~~-~~-----~i~~~d~~~~~~~~~~~~~-~~----------------------~~~~~~~~~~~~~~~~~~~ 51 (85)
|++|++++. |+ .|++||+.+++........ .. ..+..+.|+|||+.+++++
T Consensus 48 G~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~ 127 (741)
T 2ecf_A 48 GSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPDAQRLLFPL 127 (741)
T ss_dssp SSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEECTTSSEEEEEE
T ss_pred CCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECCCCCEEEEEe
Confidence 567888887 77 8999999988776555431 11 2367899999999999887
Q ss_pred CCCeEEEEEcCCcc--ccccccccccceeEEEEeCC
Q psy7058 52 SDGVARLWNIETGE--VDKEYSGHQKAITSLAFCDF 85 (85)
Q Consensus 52 ~~~~i~~~~~~~~~--~~~~~~~~~~~v~~~~~~~~ 85 (85)
. +.|++||+..+. ....+..+...+..++|+|.
T Consensus 128 ~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPD 162 (741)
T 2ecf_A 128 G-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPK 162 (741)
T ss_dssp T-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTT
T ss_pred C-CcEEEEECCCCCcceEEEcccCCcccccccCCCC
Confidence 6 899999998773 44556667788999999984
No 134
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.24 E-value=1.1e-10 Score=59.30 Aligned_cols=77 Identities=14% Similarity=0.127 Sum_probs=59.2
Q ss_pred EeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCC-cccccccccc-ccceeEEEEe
Q psy7058 6 TTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIET-GEVDKEYSGH-QKAITSLAFC 83 (85)
Q Consensus 6 ~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~-~~~v~~~~~~ 83 (85)
..+.++.|++||+.+++...... +...+.++.|+|+++++++++ ++.|++||+.. ++.......+ ...+.+++|+
T Consensus 17 ~~~~~~~i~~~d~~~~~~~~~~~--~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s 93 (297)
T 2ojh_A 17 GGSMRSSIEIFNIRTRKMRVVWQ--TPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGIS 93 (297)
T ss_dssp -CCCCEEEEEEETTTTEEEEEEE--ESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEEC
T ss_pred CCCcceeEEEEeCCCCceeeecc--CCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEEC
Confidence 34578899999999887664433 566799999999999998876 77999999988 7665555444 3677888887
Q ss_pred CC
Q psy7058 84 DF 85 (85)
Q Consensus 84 ~~ 85 (85)
|.
T Consensus 94 pd 95 (297)
T 2ojh_A 94 PD 95 (297)
T ss_dssp TT
T ss_pred CC
Confidence 73
No 135
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.22 E-value=4.5e-10 Score=58.35 Aligned_cols=80 Identities=10% Similarity=0.108 Sum_probs=61.5
Q ss_pred eeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcC-CCeEEEEEcCCccc-cccccccccceeEE
Q psy7058 3 LLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASS-DGVARLWNIETGEV-DKEYSGHQKAITSL 80 (85)
Q Consensus 3 ~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~-~~~~~~~~~~v~~~ 80 (85)
.+++.+.++.|.+||..+++....+.. ..... .+.++|+++.+++++. ++.|.+||..+++. ...+..+..+..++
T Consensus 12 ~~v~~~~~~~v~~~d~~~~~~~~~~~~-~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~ 89 (331)
T 3u4y_A 12 GIVVEQHLRRISFFSTDTLEILNQITL-GYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADV 89 (331)
T ss_dssp EEEEEGGGTEEEEEETTTCCEEEEEEC-CCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCE
T ss_pred EEEEecCCCeEEEEeCcccceeeeEEc-cCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccce
Confidence 467888899999999999988777765 34445 9999999997665554 88999999998876 55666555555557
Q ss_pred EEeC
Q psy7058 81 AFCD 84 (85)
Q Consensus 81 ~~~~ 84 (85)
+|+|
T Consensus 90 ~~s~ 93 (331)
T 3u4y_A 90 DITP 93 (331)
T ss_dssp EECT
T ss_pred EECC
Confidence 8776
No 136
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.22 E-value=9.3e-10 Score=61.27 Aligned_cols=82 Identities=10% Similarity=0.050 Sum_probs=65.4
Q ss_pred CceeEEeeCCCcEEEeeC--CCceeeeeeeccCCCcEEEEEecC----CCCEEEEEcC-CCeEEEEEcCCcccccccccc
Q psy7058 1 MGLLATTSADQTARIWNT--EDFSLVRELGTANQRWVWDAAFTL----DSKFLLTASS-DGVARLWNIETGEVDKEYSGH 73 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~--~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~ 73 (85)
|++|++++.|+.|.+||+ .+++....+.. ......+.++| +|+++++++. ++.|.+||..+++++..+..+
T Consensus 190 g~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~--g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~ 267 (543)
T 1nir_A 190 GRYLLVIGRDARIDMIDLWAKEPTKVAEIKI--GIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTR 267 (543)
T ss_dssp SCEEEEEETTSEEEEEETTSSSCEEEEEEEC--CSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECC
T ss_pred CCEEEEECCCCeEEEEECcCCCCcEEEEEec--CCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeeccc
Confidence 578999999999999999 78888777764 34578999999 9999988874 899999999988877766542
Q ss_pred -----------ccceeEEEEeC
Q psy7058 74 -----------QKAITSLAFCD 84 (85)
Q Consensus 74 -----------~~~v~~~~~~~ 84 (85)
...+..+.++|
T Consensus 268 g~~~~~~~~~~~~~v~~i~~s~ 289 (543)
T 1nir_A 268 GMTVDTQTYHPEPRVAAIIASH 289 (543)
T ss_dssp EECSSSCCEESCCCEEEEEECS
T ss_pred CcccCccccccCCceEEEEECC
Confidence 12566777765
No 137
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.20 E-value=6.2e-10 Score=57.98 Aligned_cols=83 Identities=8% Similarity=-0.005 Sum_probs=61.9
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEE-EEcCCCeEEEEEcCCcccccccccc------c
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL-TASSDGVARLWNIETGEVDKEYSGH------Q 74 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~------~ 74 (85)
.++++++.++.|.+||..+++....+..........+.++|+++.++ +...++.|.+||+.+++....+... .
T Consensus 12 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~ 91 (349)
T 1jmx_B 12 EYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVG 91 (349)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEE
T ss_pred EEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEccccccccc
Confidence 56788899999999999998887777653322467899999998654 5567889999999888766555422 2
Q ss_pred cceeEEEEeC
Q psy7058 75 KAITSLAFCD 84 (85)
Q Consensus 75 ~~v~~~~~~~ 84 (85)
..+..++|+|
T Consensus 92 ~~~~~~~~sp 101 (349)
T 1jmx_B 92 RSMYSFAISP 101 (349)
T ss_dssp ECSSCEEECT
T ss_pred ccccceEECC
Confidence 2367777776
No 138
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.19 E-value=7.1e-11 Score=65.63 Aligned_cols=78 Identities=13% Similarity=-0.016 Sum_probs=59.6
Q ss_pred CceeEEeeCC----CcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCC--eEEEEEcCCccccccccccc
Q psy7058 1 MGLLATTSAD----QTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDG--VARLWNIETGEVDKEYSGHQ 74 (85)
Q Consensus 1 g~~l~~~~~~----~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~i~~~~~~~~~~~~~~~~~~ 74 (85)
|++++.++.+ ..|++||+.+++.. .+.. +...+..+.|+|||+.+++...++ .|++||+..++.. .+..+.
T Consensus 161 G~~la~~~~~~~~~~~i~~~d~~~g~~~-~l~~-~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~ 237 (582)
T 3o4h_A 161 GDLIAGLGFFGGGRVSLFTSNLSSGGLR-VFDS-GEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPS 237 (582)
T ss_dssp TTEEEEEEEEETTEEEEEEEETTTCCCE-EECC-SSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSC
T ss_pred CCEEEEEEEcCCCCeEEEEEcCCCCCce-Eeec-CCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCC
Confidence 5678877766 77999999887765 3333 566789999999999999888888 8999999887766 555555
Q ss_pred cceeEEE
Q psy7058 75 KAITSLA 81 (85)
Q Consensus 75 ~~v~~~~ 81 (85)
..+..+.
T Consensus 238 ~~~~~~~ 244 (582)
T 3o4h_A 238 KDFSSYR 244 (582)
T ss_dssp SHHHHHC
T ss_pred cChhhhh
Confidence 5555555
No 139
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.18 E-value=4.6e-10 Score=66.11 Aligned_cols=82 Identities=15% Similarity=0.088 Sum_probs=66.1
Q ss_pred ceeEEeeCCCcEE-EeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEE
Q psy7058 2 GLLATTSADQTAR-IWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSL 80 (85)
Q Consensus 2 ~~l~~~~~~~~i~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~ 80 (85)
+.++.++.+..+. +||+.+++.... .. +...+..+.|+|+|+.+++++.++.+++||+.+++.......|...+..+
T Consensus 349 ~~l~~~s~~~~l~~~~d~~~~~~~~l-~~-~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~ 426 (1045)
T 1k32_A 349 VAFIHGTREGDFLGIYDYRTGKAEKF-EE-NLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDF 426 (1045)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEC-CC-CCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCE
T ss_pred CeEEEEECCCceEEEEECCCCCceEe-cC-CccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccce
Confidence 4567777777888 889887655433 33 66678999999999999999999999999999888776666788888999
Q ss_pred EEeCC
Q psy7058 81 AFCDF 85 (85)
Q Consensus 81 ~~~~~ 85 (85)
+|+|.
T Consensus 427 ~~SpD 431 (1045)
T 1k32_A 427 TISDN 431 (1045)
T ss_dssp EECTT
T ss_pred EECCC
Confidence 99874
No 140
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.16 E-value=9.2e-11 Score=66.34 Aligned_cols=83 Identities=13% Similarity=0.116 Sum_probs=59.9
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCCC---cEEEEEecCCCCEEEEEcCC---------CeEEEEEcCCccc--
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQR---WVWDAAFTLDSKFLLTASSD---------GVARLWNIETGEV-- 66 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~---------~~i~~~~~~~~~~-- 66 (85)
|+++++ +.|+.+++||+.+++....+.. +.. .+..+.|+|||+++++++.+ +.+.+||+.+++.
T Consensus 28 g~~~~~-~~dg~i~~~d~~~g~~~~~~~~-~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~ 105 (723)
T 1xfd_A 28 TEFIYR-EQKGTVRLWNVETNTSTVLIEG-KKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQS 105 (723)
T ss_dssp SCBCCC-CSSSCEEEBCGGGCCCEEEECT-TTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEE
T ss_pred CcEEEE-eCCCCEEEEECCCCcEEEEecc-ccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEe
Confidence 344444 6889999999998887666554 332 48899999999999988664 7888999988765
Q ss_pred cccccccccceeEEEEeCC
Q psy7058 67 DKEYSGHQKAITSLAFCDF 85 (85)
Q Consensus 67 ~~~~~~~~~~v~~~~~~~~ 85 (85)
+.....+...+..++|||.
T Consensus 106 l~~~~~~~~~~~~~~~SPd 124 (723)
T 1xfd_A 106 LDPPEVSNAKLQYAGWGPK 124 (723)
T ss_dssp CCCTTCCSCCCSBCCBCSS
T ss_pred ccCCccccccccccEECCC
Confidence 2222334445777888873
No 141
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.13 E-value=2.6e-09 Score=56.80 Aligned_cols=71 Identities=13% Similarity=0.217 Sum_probs=60.0
Q ss_pred CcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCc--cccccccccccceeEEEEeCC
Q psy7058 11 QTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETG--EVDKEYSGHQKAITSLAFCDF 85 (85)
Q Consensus 11 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~v~~~~~~~~ 85 (85)
..+.+||+.+++.+..+.. .. ...+.++|+|+++++++. +.|.+||..++ +.+..+.......+.+.++|.
T Consensus 286 ~~v~viD~~t~~~v~~i~~-~~--p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~~~~~i~~~G~~P~~~~~~p~ 358 (361)
T 2oiz_A 286 AEIWVMDTKTKQRVARIPG-RD--ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEPKLLRTIEGAAEASLQVQFHPV 358 (361)
T ss_dssp SEEEEEETTTTEEEEEEEC-TT--CCEEEEETTTTEEEEECS-SCEEEEECSSSSCEEEEEETTSCSSEEEEEECCC
T ss_pred ceEEEEECCCCcEEEEEec-CC--eeEEEECCCCCEEEEeCC-CeEEEEECCCCcceeeEEeccCCCCcEEEEecCC
Confidence 4799999999999888876 33 889999999999888877 99999999999 888887556677788888873
No 142
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.12 E-value=1.3e-09 Score=56.50 Aligned_cols=83 Identities=11% Similarity=0.065 Sum_probs=62.0
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccCCC-cEEEEEecCCCCEE-EEEcCCCeEEEEEcCCcccccccccc-----c
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTANQR-WVWDAAFTLDSKFL-LTASSDGVARLWNIETGEVDKEYSGH-----Q 74 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~-----~ 74 (85)
+++++++.++.|.+||..+++....+...... .+..+.|+|+++.+ ++...++.|.+||+.+++.+..+... .
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~ 81 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERV 81 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEE
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCccccc
Confidence 57899999999999999999888777642321 36789999999765 55666789999999888776555421 2
Q ss_pred cceeEEEEeC
Q psy7058 75 KAITSLAFCD 84 (85)
Q Consensus 75 ~~v~~~~~~~ 84 (85)
..+..++|+|
T Consensus 82 ~~~~~~~~s~ 91 (337)
T 1pby_B 82 KSLFGAALSP 91 (337)
T ss_dssp ECTTCEEECT
T ss_pred ccccceEECC
Confidence 2556677765
No 143
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.11 E-value=2.4e-09 Score=55.89 Aligned_cols=82 Identities=9% Similarity=0.093 Sum_probs=62.5
Q ss_pred ceeEEee--CCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccc----ccc
Q psy7058 2 GLLATTS--ADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSG----HQK 75 (85)
Q Consensus 2 ~~l~~~~--~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~----~~~ 75 (85)
++++.++ .++.|.+||..+++....+.. ....+..+.|+|++..+++++.++.+.+||..+++....+.. +..
T Consensus 153 ~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~ 231 (353)
T 3vgz_A 153 NTVYISGIGKESVIWVVDGGNIKLKTAIQN-TGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEH 231 (353)
T ss_dssp TEEEEEEESSSCEEEEEETTTTEEEEEECC-CCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCC
T ss_pred CEEEEEecCCCceEEEEcCCCCceEEEecC-CCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCc
Confidence 4455544 478899999999888877763 333467889999999999999999999999998877665553 344
Q ss_pred ceeEEEEeC
Q psy7058 76 AITSLAFCD 84 (85)
Q Consensus 76 ~v~~~~~~~ 84 (85)
.+..++|+|
T Consensus 232 ~~~~~~~s~ 240 (353)
T 3vgz_A 232 FFINISLDT 240 (353)
T ss_dssp CEEEEEEET
T ss_pred ccceEEECC
Confidence 566788876
No 144
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.11 E-value=1.9e-09 Score=54.73 Aligned_cols=82 Identities=11% Similarity=0.106 Sum_probs=59.0
Q ss_pred ceeE-EeeCCCcEEEeeCC--CceeeeeeeccCCCcEEEEEecCCCCEEEEEc-CCCeEEEEEcC-Cccccccccccccc
Q psy7058 2 GLLA-TTSADQTARIWNTE--DFSLVRELGTANQRWVWDAAFTLDSKFLLTAS-SDGVARLWNIE-TGEVDKEYSGHQKA 76 (85)
Q Consensus 2 ~~l~-~~~~~~~i~~~d~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~-~~~~~~~~~~~~~~ 76 (85)
++++ ++..++.+.+|++. +++. ..+.. +...+..+.|+|++..++.++ .++.+.+|++. .+.....+..+...
T Consensus 141 ~~l~~~~~~~~~~~l~~~~~~~~~~-~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 218 (297)
T 2ojh_A 141 KSFTYCGIRDQVFDIYSMDIDSGVE-TRLTH-GEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYG 218 (297)
T ss_dssp SEEEEEEEETTEEEEEEEETTTCCE-EECCC-SSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEE
T ss_pred CEEEEEECCCCceEEEEEECCCCcc-eEccc-CCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcc
Confidence 4455 77788988888853 3333 33333 556789999999999877655 58889999886 45556666667778
Q ss_pred eeEEEEeCC
Q psy7058 77 ITSLAFCDF 85 (85)
Q Consensus 77 v~~~~~~~~ 85 (85)
+..++|+|.
T Consensus 219 ~~~~~~s~d 227 (297)
T 2ojh_A 219 DWFPHPSPS 227 (297)
T ss_dssp EEEEEECTT
T ss_pred cCCeEECCC
Confidence 888898873
No 145
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.10 E-value=3.1e-09 Score=55.22 Aligned_cols=83 Identities=16% Similarity=0.016 Sum_probs=59.0
Q ss_pred CceeEEee-CCCcEEEeeCCCcee-eeeeeccCCCcEEEEEecCCCCEEEEEcCC-C--eEEEEEcCCcccccccccccc
Q psy7058 1 MGLLATTS-ADQTARIWNTEDFSL-VRELGTANQRWVWDAAFTLDSKFLLTASSD-G--VARLWNIETGEVDKEYSGHQK 75 (85)
Q Consensus 1 g~~l~~~~-~~~~i~~~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~i~~~~~~~~~~~~~~~~~~~ 75 (85)
|+++++++ .++.|.+||..+++. ...+.. ...+..++.|+|+++++++...+ + .|.+||+.+++.+..+.. ..
T Consensus 51 g~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~ 128 (331)
T 3u4y_A 51 CSNVVVTSDFCQTLVQIETQLEPPKVVAIQE-GQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPI-PY 128 (331)
T ss_dssp SCEEEEEESTTCEEEEEECSSSSCEEEEEEE-CSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEEC-CT
T ss_pred CCEEEEEeCCCCeEEEEECCCCceeEEeccc-CCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEEC-CC
Confidence 34455554 478999999998877 555544 44444449999999998855544 2 899999998887776653 34
Q ss_pred ceeEEEEeCC
Q psy7058 76 AITSLAFCDF 85 (85)
Q Consensus 76 ~v~~~~~~~~ 85 (85)
....++|+|.
T Consensus 129 ~~~~~~~spd 138 (331)
T 3u4y_A 129 DAVGIAISPN 138 (331)
T ss_dssp TEEEEEECTT
T ss_pred CccceEECCC
Confidence 5578888873
No 146
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.07 E-value=3.4e-09 Score=60.08 Aligned_cols=84 Identities=12% Similarity=-0.010 Sum_probs=59.2
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCCC-----------------cEEEEEecCCCCEEEEEcCCC---------
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQR-----------------WVWDAAFTLDSKFLLTASSDG--------- 54 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~--------- 54 (85)
|++|+.++. +.|++||+.+++........... .+..+.|+|||+.+++++.+.
T Consensus 125 G~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~ 203 (723)
T 1xfd_A 125 GQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELP 203 (723)
T ss_dssp TTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEEC
T ss_pred CCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEee
Confidence 456777775 78999999987765544331111 127899999999998876442
Q ss_pred -------------------------eEEEEEcCCcccccccccc------ccceeEEEEeCC
Q psy7058 55 -------------------------VARLWNIETGEVDKEYSGH------QKAITSLAFCDF 85 (85)
Q Consensus 55 -------------------------~i~~~~~~~~~~~~~~~~~------~~~v~~~~~~~~ 85 (85)
.|++||+..++....+..+ ...+..++|+|.
T Consensus 204 ~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpD 265 (723)
T 1xfd_A 204 TYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATS 265 (723)
T ss_dssp CCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSS
T ss_pred ccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCC
Confidence 7999999887754444433 567888999874
No 147
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.06 E-value=4.1e-09 Score=59.95 Aligned_cols=67 Identities=12% Similarity=0.107 Sum_probs=50.2
Q ss_pred CceeEEeeCCCcEEEeeCCCce--eeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccc
Q psy7058 1 MGLLATTSADQTARIWNTEDFS--LVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEY 70 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 70 (85)
|++|++++. +.|++||+.++. ....+.. +...+..+.|+|||+.++.++ ++.|++||+..++.....
T Consensus 120 g~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~-~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~~~~ 188 (741)
T 2ecf_A 120 AQRLLFPLG-GELYLYDLKQEGKAAVRQLTH-GEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQMQLT 188 (741)
T ss_dssp SSEEEEEET-TEEEEEESSSCSTTSCCBCCC-SSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEEECC
T ss_pred CCEEEEEeC-CcEEEEECCCCCcceEEEccc-CCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEEEec
Confidence 466777776 899999998872 3333433 556799999999999998876 459999999877655433
No 148
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.05 E-value=9.3e-09 Score=53.69 Aligned_cols=82 Identities=9% Similarity=0.026 Sum_probs=60.6
Q ss_pred eeEEeeCCCcEEEeeCCCceeeeeeeccCCC--------cEEEEEecCCCCEEEEEc--CCCeEEEEEcCCccccccccc
Q psy7058 3 LLATTSADQTARIWNTEDFSLVRELGTANQR--------WVWDAAFTLDSKFLLTAS--SDGVARLWNIETGEVDKEYSG 72 (85)
Q Consensus 3 ~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~~~ 72 (85)
.+++...++.+.+||..+++....+...... ....+.++|++..++.++ .++.|.+||..+++....+..
T Consensus 103 l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~ 182 (353)
T 3vgz_A 103 LWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQN 182 (353)
T ss_dssp EEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECC
T ss_pred EEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecC
Confidence 3455566789999999998887776652211 268899999998777665 578999999998887777664
Q ss_pred cccceeEEEEeC
Q psy7058 73 HQKAITSLAFCD 84 (85)
Q Consensus 73 ~~~~v~~~~~~~ 84 (85)
+...+..++|+|
T Consensus 183 ~~~~~~~~~~s~ 194 (353)
T 3vgz_A 183 TGKMSTGLALDS 194 (353)
T ss_dssp CCTTCCCCEEET
T ss_pred CCCccceEEECC
Confidence 555567777766
No 149
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.05 E-value=2e-09 Score=61.14 Aligned_cols=84 Identities=8% Similarity=-0.039 Sum_probs=58.7
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcE-----------------EEEEecCCCCEEEEEcCCC---------
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQRWV-----------------WDAAFTLDSKFLLTASSDG--------- 54 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~--------- 54 (85)
|++|+.+. ++.|++||+.+++........+...+ ..+.|+|||+.+++++.+.
T Consensus 121 G~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~ 199 (719)
T 1z68_A 121 GSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYS 199 (719)
T ss_dssp TTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEE
T ss_pred CCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEee
Confidence 45677765 77999999988776543322222212 4799999999998876442
Q ss_pred -------------------------eEEEEEcCCcccc--------ccccccccceeEEEEeCC
Q psy7058 55 -------------------------VARLWNIETGEVD--------KEYSGHQKAITSLAFCDF 85 (85)
Q Consensus 55 -------------------------~i~~~~~~~~~~~--------~~~~~~~~~v~~~~~~~~ 85 (85)
.+++||+..++.. ..+..+...+..++|+|.
T Consensus 200 ~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD 263 (719)
T 1z68_A 200 YYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTD 263 (719)
T ss_dssp ECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSS
T ss_pred ccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCC
Confidence 7889999877643 234457778899999884
No 150
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.02 E-value=5.9e-09 Score=54.04 Aligned_cols=68 Identities=9% Similarity=0.022 Sum_probs=54.5
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCcccccccccc
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGH 73 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 73 (85)
++++++ ++.|.+||+.+++....+.. ...+..+.|+|+++.+++++.++.|.+||+.+++.+..+...
T Consensus 253 ~~l~~~--~~~v~~~d~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~~~~~~~~~ 320 (337)
T 1pby_B 253 TRAFGA--YNVLESFDLEKNASIKRVPL--PHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVDLP 320 (337)
T ss_dssp SEEEEE--ESEEEEEETTTTEEEEEEEC--SSCCCEEEECTTSCEEEEESBSSEEEEEETTTCCEEEEEECG
T ss_pred CEEEEe--CCeEEEEECCCCcCcceecC--CCceeeEEECCCCCEEEEEcCCCcEEEEECcCCcEEEEEEcC
Confidence 455655 68899999999888777664 234678999999999888888999999999988877766543
No 151
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.02 E-value=1.1e-08 Score=55.17 Aligned_cols=77 Identities=12% Similarity=0.090 Sum_probs=56.5
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEE
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSL 80 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~ 80 (85)
+++|+++ .++.|++||+.+......... +...+..+.+.+. .++.+..||.+.+||+.++.... +...|.++
T Consensus 97 ~~~L~v~-~~~~l~v~dv~sl~~~~~~~~-~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~----~~~~Vs~v 168 (388)
T 1xip_A 97 GDQVLVS-TRNALYSLDLEELSEFRTVTS-FEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ----LAQNVTSF 168 (388)
T ss_dssp TTEEEEE-ESSEEEEEESSSTTCEEEEEE-CSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE----EEESEEEE
T ss_pred CCEEEEE-cCCcEEEEEchhhhccCccce-eecceeeEEecCC--CEEEEECCCCEEEEEccCCcccc----ccCCceEE
Confidence 3567777 789999999987664444433 5556777766543 38888999999999998776532 45689999
Q ss_pred EEeCC
Q psy7058 81 AFCDF 85 (85)
Q Consensus 81 ~~~~~ 85 (85)
+|+|.
T Consensus 169 ~WSpk 173 (388)
T 1xip_A 169 DVTNS 173 (388)
T ss_dssp EECSS
T ss_pred EEcCC
Confidence 99983
No 152
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.02 E-value=3.5e-09 Score=54.98 Aligned_cols=81 Identities=12% Similarity=0.033 Sum_probs=53.8
Q ss_pred CceeEEeeCC-CcEEEeeCC--Ccee--eeeeeccCCCcEEEEEecCCCCEEEEEc-CCCeEEEEEcC---Ccccccccc
Q psy7058 1 MGLLATTSAD-QTARIWNTE--DFSL--VRELGTANQRWVWDAAFTLDSKFLLTAS-SDGVARLWNIE---TGEVDKEYS 71 (85)
Q Consensus 1 g~~l~~~~~~-~~i~~~d~~--~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~---~~~~~~~~~ 71 (85)
|+++++++.+ +.+.+|++. +++. ...+.. ...+..++|+|+++.+++++ .++.|.+|++. ..+....+.
T Consensus 49 g~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~ 126 (343)
T 1ri6_A 49 KRYLYVGVRPEFRVLAYRIAPDDGALTFAAESAL--PGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVE 126 (343)
T ss_dssp SSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEC--SSCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEEC
T ss_pred CCEEEEeecCCCeEEEEEecCCCCceeecccccc--CCCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCcccccccccc
Confidence 4567777776 899999987 4443 333332 23578899999999876655 58899999994 333333343
Q ss_pred ccccceeEEEEeC
Q psy7058 72 GHQKAITSLAFCD 84 (85)
Q Consensus 72 ~~~~~v~~~~~~~ 84 (85)
....+.+++|+|
T Consensus 127 -~~~~~~~~~~s~ 138 (343)
T 1ri6_A 127 -GLDGCHSANISP 138 (343)
T ss_dssp -CCTTBCCCEECT
T ss_pred -CCCCceEEEECC
Confidence 233466777766
No 153
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.01 E-value=4.4e-09 Score=54.61 Aligned_cols=79 Identities=14% Similarity=0.172 Sum_probs=53.7
Q ss_pred eEEeeCCCcEEEeeCC-Cc--eeeeeeeccCCCcEEEEEecCCCCEEEEEcCC-CeEEEEEcC--Ccc--cccccccccc
Q psy7058 4 LATTSADQTARIWNTE-DF--SLVRELGTANQRWVWDAAFTLDSKFLLTASSD-GVARLWNIE--TGE--VDKEYSGHQK 75 (85)
Q Consensus 4 l~~~~~~~~i~~~d~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~~--~~~--~~~~~~~~~~ 75 (85)
+++++.++.|++||+. ++ +....+. +...+..++|+|+++.+++++.+ +.+.+|++. .++ .+..+..+.
T Consensus 8 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~--~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~- 84 (343)
T 1ri6_A 8 YIASPESQQIHVWNLNHEGALTLTQVVD--VPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG- 84 (343)
T ss_dssp EEEEGGGTEEEEEEECTTSCEEEEEEEE--CSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-
T ss_pred EEeCCCCCeEEEEEECCCCcEEEeeeEe--cCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-
Confidence 3444789999999985 33 2233322 45567889999999988887776 899999997 333 233344333
Q ss_pred ceeEEEEeCC
Q psy7058 76 AITSLAFCDF 85 (85)
Q Consensus 76 ~v~~~~~~~~ 85 (85)
.+..++|+|.
T Consensus 85 ~~~~~~~s~d 94 (343)
T 1ri6_A 85 SLTHISTDHQ 94 (343)
T ss_dssp CCSEEEECTT
T ss_pred CCcEEEEcCC
Confidence 6777888763
No 154
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=98.98 E-value=1.9e-09 Score=61.20 Aligned_cols=78 Identities=18% Similarity=0.244 Sum_probs=57.8
Q ss_pred eEEeeCCCcEEEeeCCCceeeeeeeccCCC---cEEEEEecCCCCEEEEEcC---------CCeEEEEEcCCcccc--cc
Q psy7058 4 LATTSADQTARIWNTEDFSLVRELGTANQR---WVWDAAFTLDSKFLLTASS---------DGVARLWNIETGEVD--KE 69 (85)
Q Consensus 4 l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~---------~~~i~~~~~~~~~~~--~~ 69 (85)
++..+.|+.|++||+.+++....+.. +.. .+..+.|+|||+.+++++. ++.+++||+.+++.. ..
T Consensus 29 ~~~~~~d~~i~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~ 107 (719)
T 1z68_A 29 YLHQSADNNIVLYNIETGQSYTILSN-RTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNE 107 (719)
T ss_dssp EEEECTTSCEEEEESSSCCEEEEECH-HHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSC
T ss_pred EEEEcCCCCEEEEEcCCCcEEEEEcc-ccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCcccccee
Confidence 44455689999999998887665543 221 3789999999999988765 689999999887763 22
Q ss_pred ccccccceeEEEEeCC
Q psy7058 70 YSGHQKAITSLAFCDF 85 (85)
Q Consensus 70 ~~~~~~~v~~~~~~~~ 85 (85)
+ ...+..++|||.
T Consensus 108 l---~~~~~~~~~SPD 120 (719)
T 1z68_A 108 L---PRPIQYLCWSPV 120 (719)
T ss_dssp C---CSSBCCEEECSS
T ss_pred c---CcccccceECCC
Confidence 2 246778888874
No 155
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=98.97 E-value=5e-09 Score=59.37 Aligned_cols=84 Identities=10% Similarity=0.012 Sum_probs=59.1
Q ss_pred CceeEEeeCCCcEEEeeCCC-----ceeeeeeeccCCC-------------cEEEEEecCCCCEEEEEc-----------
Q psy7058 1 MGLLATTSADQTARIWNTED-----FSLVRELGTANQR-------------WVWDAAFTLDSKFLLTAS----------- 51 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~-----~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~----------- 51 (85)
|++|+.+ .++.|++||+.+ ++........... .+..+.|+|||+.+++++
T Consensus 132 G~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~ 210 (706)
T 2z3z_A 132 GDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPI 210 (706)
T ss_dssp SSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEE
T ss_pred CCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEe
Confidence 4567764 678999999988 6665443331221 147899999999998876
Q ss_pred ----------------------CCCeEEEEEcCCcccccccc--ccccceeEEEEeCC
Q psy7058 52 ----------------------SDGVARLWNIETGEVDKEYS--GHQKAITSLAFCDF 85 (85)
Q Consensus 52 ----------------------~~~~i~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~ 85 (85)
.+..|++||+.+++...... .+...+..++|+|.
T Consensus 211 ~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spd 268 (706)
T 2z3z_A 211 VDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPD 268 (706)
T ss_dssp EECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTT
T ss_pred eccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECC
Confidence 34679999998876543332 35667889999874
No 156
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=98.95 E-value=1.5e-08 Score=58.04 Aligned_cols=80 Identities=10% Similarity=0.094 Sum_probs=59.0
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccCCC-----cEEEEEecCCCCEEEEEcCC---------CeEEEEEcCCcccc
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTANQR-----WVWDAAFTLDSKFLLTASSD---------GVARLWNIETGEVD 67 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~---------~~i~~~~~~~~~~~ 67 (85)
++++++ |+.|++||+.+++....+.. +.. ....+.|+|||+.++.++.+ +.+.+||+.+++..
T Consensus 29 ~~~~~~--~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~ 105 (740)
T 4a5s_A 29 EYLYKQ--ENNILVFNAEYGNSSVFLEN-STFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLI 105 (740)
T ss_dssp EEEEEE--TTEEEEEETTTCCEEEEECT-TTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEEC
T ss_pred cEEEEc--CCcEEEEECCCCceEEEEec-hhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEE
Confidence 455665 89999999999887665554 221 22458899999999887765 56779999988754
Q ss_pred ccccccccceeEEEEeCC
Q psy7058 68 KEYSGHQKAITSLAFCDF 85 (85)
Q Consensus 68 ~~~~~~~~~v~~~~~~~~ 85 (85)
.+..+...+...+|||.
T Consensus 106 -~l~~~~~~~~~~~~SPd 122 (740)
T 4a5s_A 106 -TEERIPNNTQWVTWSPV 122 (740)
T ss_dssp -CSSCCCTTEEEEEECSS
T ss_pred -EcccCCCcceeeEECCC
Confidence 35556778899999984
No 157
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=98.93 E-value=1.2e-08 Score=53.14 Aligned_cols=67 Identities=12% Similarity=0.041 Sum_probs=53.1
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccc
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSG 72 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 72 (85)
++++++ ++.|.+||+.+++....+.. ...+..+.|++++..+++++.++.|.+||..+++.+..+..
T Consensus 268 ~~l~~~--~~~v~~~d~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~~~~~~~~~~ 334 (349)
T 1jmx_B 268 NQIYGV--LNRLAKYDLKQRKLIKAANL--DHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIKL 334 (349)
T ss_dssp TEEEEE--ESEEEEEETTTTEEEEEEEC--SSCCCEEEECSSSSCEEEESBSSEEEEEETTTTEEEEEEEC
T ss_pred CEEEEE--cCeEEEEECccCeEEEEEcC--CCCccceEECCCCCEEEEecCCCeEEEEeccccceeeeeec
Confidence 455555 77999999999888777664 23367899999998888888889999999998887766653
No 158
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=98.89 E-value=2.4e-08 Score=53.89 Aligned_cols=74 Identities=14% Similarity=0.044 Sum_probs=56.0
Q ss_pred eEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccc--cccc------c---c
Q psy7058 4 LATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEV--DKEY------S---G 72 (85)
Q Consensus 4 l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~------~---~ 72 (85)
++++..||.+.+||+.++.... ....+.+++|+|+| ++.+..|+.+++|+...... ...+ . .
T Consensus 139 ~av~~~dG~L~v~dl~~~~~~~-----~~~~Vs~v~WSpkG--~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~ 211 (388)
T 1xip_A 139 LVILNSVNDLSALDLRTKSTKQ-----LAQNVTSFDVTNSQ--LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPV 211 (388)
T ss_dssp EEEEETTSEEEEEETTTCCEEE-----EEESEEEEEECSSE--EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCT
T ss_pred EEEEECCCCEEEEEccCCcccc-----ccCCceEEEEcCCc--eEEEEcCCcEEEEcCCCccccccceecCCcccccccC
Confidence 6788999999999999776543 22359999999999 57788999999998765553 2233 2 2
Q ss_pred cccceeEEEEeC
Q psy7058 73 HQKAITSLAFCD 84 (85)
Q Consensus 73 ~~~~v~~~~~~~ 84 (85)
|...|.++.|.+
T Consensus 212 ~~~~V~sI~wl~ 223 (388)
T 1xip_A 212 EEYSPLSVTILS 223 (388)
T ss_dssp TTSEEEEEEESS
T ss_pred CCeeEEEEEEec
Confidence 567788888864
No 159
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=98.87 E-value=7.1e-08 Score=50.85 Aligned_cols=84 Identities=11% Similarity=0.047 Sum_probs=54.6
Q ss_pred CceeEEee-CCCcEEEeeCCCceee--eeeec--cCCCcEEEEEecCCCCEEEEEcC--CCeEEEEEcC--Ccc--cccc
Q psy7058 1 MGLLATTS-ADQTARIWNTEDFSLV--RELGT--ANQRWVWDAAFTLDSKFLLTASS--DGVARLWNIE--TGE--VDKE 69 (85)
Q Consensus 1 g~~l~~~~-~~~~i~~~d~~~~~~~--~~~~~--~~~~~~~~~~~~~~~~~~~~~~~--~~~i~~~~~~--~~~--~~~~ 69 (85)
|+++++++ .++.+.+||+.+++.. ..+.. ........+.|+|+|+++++... ++.+.+|++. +++ .+..
T Consensus 222 g~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~ 301 (361)
T 3scy_A 222 GKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGY 301 (361)
T ss_dssp SSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEE
T ss_pred CCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeE
Confidence 35565555 6889999998866442 22222 12234679999999998866655 4899999985 333 3333
Q ss_pred ccccccceeEEEEeCC
Q psy7058 70 YSGHQKAITSLAFCDF 85 (85)
Q Consensus 70 ~~~~~~~v~~~~~~~~ 85 (85)
+.. ...+..++|+|.
T Consensus 302 ~~~-g~~~~~~~~spd 316 (361)
T 3scy_A 302 QLT-GIHPRNFIITPN 316 (361)
T ss_dssp EEC-SSCCCEEEECTT
T ss_pred ecC-CCCCceEEECCC
Confidence 333 456677888763
No 160
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=98.86 E-value=2.1e-08 Score=55.87 Aligned_cols=77 Identities=6% Similarity=0.028 Sum_probs=56.2
Q ss_pred eEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCC----CeEEEEEcCCccccccccccccceeE
Q psy7058 4 LATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSD----GVARLWNIETGEVDKEYSGHQKAITS 79 (85)
Q Consensus 4 l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~i~~~~~~~~~~~~~~~~~~~~v~~ 79 (85)
+++++.++.+.+||+.+++....... .. ..+.|+|||+.+++++.+ ..|++||+.+++.. .+..+...+..
T Consensus 125 ~~~s~~~~~~~l~d~~~g~~~~l~~~-~~---~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~-~l~~~~~~~~~ 199 (582)
T 3o4h_A 125 VFTGATEDRVALYALDGGGLRELARL-PG---FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLR-VFDSGEGSFSS 199 (582)
T ss_dssp EEEEECSSCEEEEEEETTEEEEEEEE-SS---CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCE-EECCSSCEEEE
T ss_pred EEEecCCCCceEEEccCCcEEEeecC-CC---ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCce-EeecCCCcccc
Confidence 34444455566999988776554433 22 788999999999977766 67999998877644 55667788899
Q ss_pred EEEeCC
Q psy7058 80 LAFCDF 85 (85)
Q Consensus 80 ~~~~~~ 85 (85)
++|+|.
T Consensus 200 ~~~SpD 205 (582)
T 3o4h_A 200 ASISPG 205 (582)
T ss_dssp EEECTT
T ss_pred ceECCC
Confidence 999984
No 161
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.85 E-value=9.3e-08 Score=49.31 Aligned_cols=80 Identities=16% Similarity=0.039 Sum_probs=60.3
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccc-cceeE
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQ-KAITS 79 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~-~~v~~ 79 (85)
++.|++++.++.|.+||..+++.+.++.......+.++.+.|+|+.++ +.++.+..||. +++.+..+.... ..+.+
T Consensus 5 ~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~~~ 81 (276)
T 3no2_A 5 QHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAGCEMQT 81 (276)
T ss_dssp CEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCEEEE
T ss_pred CcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCccccc
Confidence 467899999999999999899998888763223578899999999888 34678999998 787777766432 34444
Q ss_pred EEEe
Q psy7058 80 LAFC 83 (85)
Q Consensus 80 ~~~~ 83 (85)
+.+.
T Consensus 82 ~~~~ 85 (276)
T 3no2_A 82 ARIL 85 (276)
T ss_dssp EEEC
T ss_pred cEEC
Confidence 4443
No 162
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=98.80 E-value=6.8e-07 Score=46.87 Aligned_cols=85 Identities=12% Similarity=0.151 Sum_probs=53.0
Q ss_pred CceeEEee-CCCcEEEeeCCC-c--eeeeeeecc--------CCCcEEEEEecCCCCEEEEEcCCCeEEEEEcC-Ccccc
Q psy7058 1 MGLLATTS-ADQTARIWNTED-F--SLVRELGTA--------NQRWVWDAAFTLDSKFLLTASSDGVARLWNIE-TGEVD 67 (85)
Q Consensus 1 g~~l~~~~-~~~~i~~~d~~~-~--~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~ 67 (85)
|++|++++ .++.+.+|++.. + .....+... ....+..+.|+|+++.+++...++.+.+|++. .++..
T Consensus 97 g~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~ 176 (347)
T 3hfq_A 97 RQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLS 176 (347)
T ss_dssp TTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEE
T ss_pred CCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEE
Confidence 45677666 678999999852 2 223332221 11247889999999966666678899999998 44322
Q ss_pred --ccccc-cccceeEEEEeCC
Q psy7058 68 --KEYSG-HQKAITSLAFCDF 85 (85)
Q Consensus 68 --~~~~~-~~~~v~~~~~~~~ 85 (85)
..+.. .......++|+|.
T Consensus 177 ~~~~~~~~~g~~p~~~~~spd 197 (347)
T 3hfq_A 177 EQSVLTMEAGFGPRHLVFSPD 197 (347)
T ss_dssp EEEEEECCTTCCEEEEEECTT
T ss_pred EeeeEEcCCCCCCceEEECCC
Confidence 11111 2235667788763
No 163
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=98.79 E-value=5.4e-08 Score=55.24 Aligned_cols=84 Identities=17% Similarity=0.285 Sum_probs=58.2
Q ss_pred CceeEEeeCCC-----cEEEeeCCCceeeeeee-ccCCC---cEEEEEecC--CCCEEEEEcCCCeEEEEEcC-Cccccc
Q psy7058 1 MGLLATTSADQ-----TARIWNTEDFSLVRELG-TANQR---WVWDAAFTL--DSKFLLTASSDGVARLWNIE-TGEVDK 68 (85)
Q Consensus 1 g~~l~~~~~~~-----~i~~~d~~~~~~~~~~~-~~~~~---~~~~~~~~~--~~~~~~~~~~~~~i~~~~~~-~~~~~~ 68 (85)
|++|++++.++ .+++||+.+++....+. ..... .+..+.|+| +|++++++..++.+++|.+. ++....
T Consensus 269 g~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~ 348 (706)
T 2z3z_A 269 ENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIR 348 (706)
T ss_dssp SSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEE
T ss_pred CCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEE
Confidence 45677766665 89999999883333332 21221 245789999 99999999889988999876 555566
Q ss_pred cccccccceeE-EEEeC
Q psy7058 69 EYSGHQKAITS-LAFCD 84 (85)
Q Consensus 69 ~~~~~~~~v~~-~~~~~ 84 (85)
.+..+...+.. ++|+|
T Consensus 349 ~l~~~~~~v~~~~~~sp 365 (706)
T 2z3z_A 349 QVTKGEWEVTNFAGFDP 365 (706)
T ss_dssp ECCCSSSCEEEEEEECT
T ss_pred ecCCCCeEEEeeeEEcC
Confidence 66666666765 67876
No 164
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=98.78 E-value=3e-07 Score=48.47 Aligned_cols=82 Identities=18% Similarity=0.142 Sum_probs=53.1
Q ss_pred CceeEEeeCC--CcEEEeeCC--Cce--eeeeeeccCCCcEEEEEecCCCCEEEEEc-CCCeEEEEEc--CCccccccc-
Q psy7058 1 MGLLATTSAD--QTARIWNTE--DFS--LVRELGTANQRWVWDAAFTLDSKFLLTAS-SDGVARLWNI--ETGEVDKEY- 70 (85)
Q Consensus 1 g~~l~~~~~~--~~i~~~d~~--~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~--~~~~~~~~~- 70 (85)
|++|+++..+ +.+.+|++. +++ ....+.. ...+..+.|+|+++++++++ .++.+.+|++ .+++.....
T Consensus 270 g~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~--g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~ 347 (361)
T 3scy_A 270 GKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT--GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLTDIKK 347 (361)
T ss_dssp SSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC--SSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEEECSC
T ss_pred CCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC--CCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEeecce
Confidence 4566565554 789999985 344 2333332 34567899999999888776 6789999755 455543322
Q ss_pred cccccceeEEEEeC
Q psy7058 71 SGHQKAITSLAFCD 84 (85)
Q Consensus 71 ~~~~~~v~~~~~~~ 84 (85)
..+...+.|+.|.+
T Consensus 348 ~~~~~~p~~v~~~~ 361 (361)
T 3scy_A 348 DIKVDKPVCLKFVD 361 (361)
T ss_dssp CEECSSEEEEEEEC
T ss_pred eeeCCCCeEEEEcC
Confidence 22445788888863
No 165
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=98.77 E-value=1.3e-07 Score=50.14 Aligned_cols=70 Identities=11% Similarity=-0.001 Sum_probs=51.2
Q ss_pred CceeEEeeC-CC--cEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCcccccccc
Q psy7058 1 MGLLATTSA-DQ--TARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYS 71 (85)
Q Consensus 1 g~~l~~~~~-~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 71 (85)
|++|+..+. ++ .|.+||+.+++....... +...+....|+|+++.++....++.+++||+..++....+.
T Consensus 47 g~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~-~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~ 119 (388)
T 3pe7_A 47 GSKLLFGGAFDGPWNYYLLDLNTQVATQLTEG-RGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQ 119 (388)
T ss_dssp SCEEEEEECTTSSCEEEEEETTTCEEEECCCS-SCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEE
T ss_pred CCEEEEEEcCCCCceEEEEeCCCCceEEeeeC-CCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeee
Confidence 456776666 56 488899988877655543 33333456799999999999989999999998876554443
No 166
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=98.76 E-value=6.6e-08 Score=54.55 Aligned_cols=83 Identities=13% Similarity=0.140 Sum_probs=57.6
Q ss_pred CceeEEeeCC----------CcEEEeeCCC------ceeeeeee-ccCCCcEEEEEecCCCCEEEEEcCC--------Ce
Q psy7058 1 MGLLATTSAD----------QTARIWNTED------FSLVRELG-TANQRWVWDAAFTLDSKFLLTASSD--------GV 55 (85)
Q Consensus 1 g~~l~~~~~~----------~~i~~~d~~~------~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~--------~~ 55 (85)
|+.|+.++.+ ..|++||+.+ ++.. .+. . ....+..+.|+|||+.++..+.+ ..
T Consensus 141 g~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~l~~~-~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~ 218 (662)
T 3azo_A 141 RGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVR-ELSDD-AHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTE 218 (662)
T ss_dssp TTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSE-ESSCS-CSSEECCCEECTTSSEEEEEEECTTCCTTTCEE
T ss_pred CCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCcee-EEEec-CCCcccCceECCCCCEEEEEECCCCCCCCCCcE
Confidence 4667777765 5799999987 5543 333 2 34567788999999998876644 37
Q ss_pred EEEEEcC-Cc---cccccccccccceeEEEEeCC
Q psy7058 56 ARLWNIE-TG---EVDKEYSGHQKAITSLAFCDF 85 (85)
Q Consensus 56 i~~~~~~-~~---~~~~~~~~~~~~v~~~~~~~~ 85 (85)
|++||+. ++ +.......+...+..+.|+|.
T Consensus 219 i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spd 252 (662)
T 3azo_A 219 LKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPD 252 (662)
T ss_dssp EEEEEECTTSCEEEEEEEEEETTBCEEEEEECTT
T ss_pred EEEEEECCCCcccccEEeCCCCCceEcceEECCC
Confidence 9999998 46 333333334678888999873
No 167
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.73 E-value=8.6e-07 Score=50.01 Aligned_cols=78 Identities=12% Similarity=0.121 Sum_probs=60.7
Q ss_pred eeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcC--CccccccccccccceeEE
Q psy7058 3 LLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIE--TGEVDKEYSGHQKAITSL 80 (85)
Q Consensus 3 ~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~~~v~~~ 80 (85)
++++...++.+.++|..+++.+..+... .....+.++|+|+++++++.++.|.+||+. +.+.+..+... .....+
T Consensus 169 ~~V~~~~~~~V~viD~~t~~v~~~i~~g--~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G-~~P~~i 245 (567)
T 1qks_A 169 FSVTLRDAGQIALIDGSTYEIKTVLDTG--YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIG-SEARSI 245 (567)
T ss_dssp EEEEETTTTEEEEEETTTCCEEEEEECS--SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECC-SEEEEE
T ss_pred EEEEeCCCCeEEEEECCCCeEEEEEeCC--CCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecC-CCCcee
Confidence 4566677899999999999988887752 236689999999999999999999999995 66666666532 334567
Q ss_pred EEe
Q psy7058 81 AFC 83 (85)
Q Consensus 81 ~~~ 83 (85)
+|+
T Consensus 246 a~s 248 (567)
T 1qks_A 246 ETS 248 (567)
T ss_dssp EEC
T ss_pred EEc
Confidence 776
No 168
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=98.73 E-value=5.5e-07 Score=47.22 Aligned_cols=85 Identities=6% Similarity=-0.015 Sum_probs=54.2
Q ss_pred CceeE-EeeCCCcEEEeeCCC--ceee--eeeeccC-----CCcEEEEEecCCCCEEE-EEcCCCeEEEEEcCCc---cc
Q psy7058 1 MGLLA-TTSADQTARIWNTED--FSLV--RELGTAN-----QRWVWDAAFTLDSKFLL-TASSDGVARLWNIETG---EV 66 (85)
Q Consensus 1 g~~l~-~~~~~~~i~~~d~~~--~~~~--~~~~~~~-----~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~---~~ 66 (85)
|++++ +...++.+.+|++.. ++.. ..+.... ...+..++|+|+|++++ +...++.|.+|++... +.
T Consensus 198 g~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~ 277 (347)
T 3hfq_A 198 GQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTL 277 (347)
T ss_dssp SSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEE
T ss_pred CCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEE
Confidence 34444 456678899998763 4332 2222101 13578899999999774 5556899999998632 33
Q ss_pred cccccccccceeEEEEeCC
Q psy7058 67 DKEYSGHQKAITSLAFCDF 85 (85)
Q Consensus 67 ~~~~~~~~~~v~~~~~~~~ 85 (85)
+..+..+...+..++|+|.
T Consensus 278 ~~~~~~~~~~~~~~~~spd 296 (347)
T 3hfq_A 278 IQQISTEGDFPRDFDLDPT 296 (347)
T ss_dssp EEEEECSSSCCCEEEECTT
T ss_pred eEEEecCCCCcCeEEECCC
Confidence 4444444556778888873
No 169
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=98.71 E-value=1.1e-06 Score=46.58 Aligned_cols=77 Identities=10% Similarity=0.084 Sum_probs=52.4
Q ss_pred CCCcEEEeeCC-Cceeeeeeec---cCCCcEEEEEecCCCCEEEEEcC-CCeEEEEEcC-Ccccc--cccc--cccccee
Q psy7058 9 ADQTARIWNTE-DFSLVRELGT---ANQRWVWDAAFTLDSKFLLTASS-DGVARLWNIE-TGEVD--KEYS--GHQKAIT 78 (85)
Q Consensus 9 ~~~~i~~~d~~-~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~-~~~~~--~~~~--~~~~~v~ 78 (85)
.++.+.+|++. +++....+.. .....+..+.|+|+|+++++++. ++.|++|++. +++.. ..+. .+...+.
T Consensus 117 ~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~ 196 (365)
T 1jof_A 117 FAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPR 196 (365)
T ss_dssp SCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEE
T ss_pred CCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCC
Confidence 68899999987 4554433321 13456899999999998877654 6799999997 55432 2232 2345678
Q ss_pred EEEEeCC
Q psy7058 79 SLAFCDF 85 (85)
Q Consensus 79 ~~~~~~~ 85 (85)
.++|+|.
T Consensus 197 ~~~~spd 203 (365)
T 1jof_A 197 WVAMHPT 203 (365)
T ss_dssp EEEECTT
T ss_pred EeEECCC
Confidence 8888873
No 170
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=98.66 E-value=5.9e-07 Score=47.01 Aligned_cols=80 Identities=18% Similarity=0.155 Sum_probs=53.6
Q ss_pred CceeEEeeCC-----CcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcC-----------------------
Q psy7058 1 MGLLATTSAD-----QTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASS----------------------- 52 (85)
Q Consensus 1 g~~l~~~~~~-----~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------- 52 (85)
|++|+..+.+ ..|.+||+.+++....... . . +..+.|+|+++.++..+.
T Consensus 70 g~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~-~-~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 146 (347)
T 2gop_A 70 GKKIAFMRANEEKKVSEIWVADLETLSSKKILEA-K-N-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGF 146 (347)
T ss_dssp SSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEE-S-E-EEEEEECTTSSEEEEEEECCCC---------CCCC------
T ss_pred CCEEEEEEeccCCCcceEEEEECCCCceEEEEcC-C-C-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCccc
Confidence 4566655543 2488889887776554443 2 3 889999999998887653
Q ss_pred ----CCeEEEEEcCCccccccccccccceeEEEEeCC
Q psy7058 53 ----DGVARLWNIETGEVDKEYSGHQKAITSLAFCDF 85 (85)
Q Consensus 53 ----~~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 85 (85)
...|.+|++..++.+..+.. . .+..+.|+|.
T Consensus 147 ~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spd 181 (347)
T 2gop_A 147 FDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRD 181 (347)
T ss_dssp ---CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETT
T ss_pred ccCccceEEEEECCCCeEEeeecC-C-CcccccCCCC
Confidence 25688999987765344443 3 6777788763
No 171
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=98.66 E-value=2.5e-07 Score=53.17 Aligned_cols=64 Identities=5% Similarity=-0.179 Sum_probs=48.3
Q ss_pred CceeEEeeCC---------CcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCcccc
Q psy7058 1 MGLLATTSAD---------QTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVD 67 (85)
Q Consensus 1 g~~l~~~~~~---------~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 67 (85)
|++|+.++.+ +.+.+||+.+++... +.. +...+....|+|||+.++.+ .++.|++|++..+...
T Consensus 73 g~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~-l~~-~~~~~~~~~~SPdG~~la~~-~~~~i~~~~~~~~~~~ 145 (740)
T 4a5s_A 73 GQFILLEYNYVKQWRHSYTASYDIYDLNKRQLIT-EER-IPNNTQWVTWSPVGHKLAYV-WNNDIYVKIEPNLPSY 145 (740)
T ss_dssp SSEEEEEEEEEECSSSCEEEEEEEEETTTTEECC-SSC-CCTTEEEEEECSSTTCEEEE-ETTEEEEESSTTSCCE
T ss_pred CCEEEEEECCeeeEEEccceEEEEEECCCCcEEE-ccc-CCCcceeeEECCCCCEEEEE-ECCeEEEEECCCCceE
Confidence 4567776665 556799999887644 332 45679999999999999887 5689999999876543
No 172
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=98.65 E-value=3.5e-06 Score=43.96 Aligned_cols=82 Identities=11% Similarity=0.045 Sum_probs=55.7
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCC----CeEEEEEcCCcccccccc--cccc
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSD----GVARLWNIETGEVDKEYS--GHQK 75 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~i~~~~~~~~~~~~~~~--~~~~ 75 (85)
++++++..++.|.+||..+++....... ....+..+.+++++.++++...+ +.|.+||...+.....+. ....
T Consensus 57 ~l~~~~~~~~~i~~~d~~~~~~~~~~~~-~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~ 135 (333)
T 2dg1_A 57 QLFLLDVFEGNIFKINPETKEIKRPFVS-HKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAY 135 (333)
T ss_dssp CEEEEETTTCEEEEECTTTCCEEEEEEC-SSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCC
T ss_pred CEEEEECCCCEEEEEeCCCCcEEEEeeC-CCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCC
Confidence 4455677788999999887765443322 44568999999999887776665 689999987665431221 2334
Q ss_pred ceeEEEEeC
Q psy7058 76 AITSLAFCD 84 (85)
Q Consensus 76 ~v~~~~~~~ 84 (85)
.++.++++|
T Consensus 136 ~~~~i~~d~ 144 (333)
T 2dg1_A 136 CIDDMVFDS 144 (333)
T ss_dssp CEEEEEECT
T ss_pred cccceEECC
Confidence 567777665
No 173
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=98.63 E-value=6e-07 Score=51.39 Aligned_cols=83 Identities=11% Similarity=-0.023 Sum_probs=53.8
Q ss_pred CceeEEeeCCC-----cEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCe----------------EEEE
Q psy7058 1 MGLLATTSADQ-----TARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGV----------------ARLW 59 (85)
Q Consensus 1 g~~l~~~~~~~-----~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------i~~~ 59 (85)
|++|+.+..++ .|++||+.+++....... . ..+..+.|+|||+.++.+..+.. |++|
T Consensus 136 g~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~-~-~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 213 (710)
T 2xdw_A 136 GEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLE-R-VKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYH 213 (710)
T ss_dssp SSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEE-E-ECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEE
T ss_pred CCEEEEEEcCCCCceEEEEEEECCCCCCCccccc-C-cccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEE
Confidence 45666444332 899999999887654322 1 12567899999999888776654 9999
Q ss_pred EcCCcccc--cccc--ccccceeEEEEeCC
Q psy7058 60 NIETGEVD--KEYS--GHQKAITSLAFCDF 85 (85)
Q Consensus 60 ~~~~~~~~--~~~~--~~~~~v~~~~~~~~ 85 (85)
++.++... ..+. .+...+..+.|+|.
T Consensus 214 ~l~t~~~~~~~v~~~~~~~~~~~~~~~SpD 243 (710)
T 2xdw_A 214 VLGTDQSEDILCAEFPDEPKWMGGAELSDD 243 (710)
T ss_dssp ETTSCGGGCEEEECCTTCTTCEEEEEECTT
T ss_pred ECCCCcccceEEeccCCCCeEEEEEEEcCC
Confidence 99776532 1122 23344667777763
No 174
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=98.62 E-value=2.9e-06 Score=44.54 Aligned_cols=82 Identities=9% Similarity=0.192 Sum_probs=57.2
Q ss_pred ceeEEee-CCCcEEEeeCCCceeeeeeecc---------CCCcEEEEEecCC-CCEEEEEcCCCeEEEEEcCCccccccc
Q psy7058 2 GLLATTS-ADQTARIWNTEDFSLVRELGTA---------NQRWVWDAAFTLD-SKFLLTASSDGVARLWNIETGEVDKEY 70 (85)
Q Consensus 2 ~~l~~~~-~~~~i~~~d~~~~~~~~~~~~~---------~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~ 70 (85)
+.+++.+ .++.|++|| .+++....+... .-.....++++++ +..+++...++.|++|+..+++.+..+
T Consensus 156 ~lyv~d~~~~~~I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~ 234 (329)
T 3fvz_A 156 AVFVSDGYCNSRIVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREI 234 (329)
T ss_dssp CEEEEECSSCCEEEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred eEEEEeCCCCCeEEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEE
Confidence 4556665 588999999 456665555321 1123788999998 777778788899999999877776665
Q ss_pred c--ccccceeEEEEeC
Q psy7058 71 S--GHQKAITSLAFCD 84 (85)
Q Consensus 71 ~--~~~~~v~~~~~~~ 84 (85)
. .+...+..++|+|
T Consensus 235 ~~~~~~~~~~~~~~~p 250 (329)
T 3fvz_A 235 KHASFGRNVFAISYIP 250 (329)
T ss_dssp CCTTTTTCEEEEEEET
T ss_pred eccccCCCcceeeecC
Confidence 3 3455677777765
No 175
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=98.62 E-value=1.2e-07 Score=50.32 Aligned_cols=84 Identities=13% Similarity=0.169 Sum_probs=53.5
Q ss_pred CceeEEeeCCCcEEEeeCC-CceeeeeeeccCCCcEEEEEecCCCCE--EEEEc-------------CCCeEEEEEcC-C
Q psy7058 1 MGLLATTSADQTARIWNTE-DFSLVRELGTANQRWVWDAAFTLDSKF--LLTAS-------------SDGVARLWNIE-T 63 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-------------~~~~i~~~~~~-~ 63 (85)
|++|++++.+ .+.+|++. +++...............+.++|+|+. +++++ .++.+.+|++. +
T Consensus 51 g~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~ 129 (365)
T 1jof_A 51 RKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSET 129 (365)
T ss_dssp SSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTT
T ss_pred CCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCC
Confidence 4567778777 89999986 666543322111112345889999984 44543 68899999997 3
Q ss_pred cccccccc----ccccceeEEEEeCC
Q psy7058 64 GEVDKEYS----GHQKAITSLAFCDF 85 (85)
Q Consensus 64 ~~~~~~~~----~~~~~v~~~~~~~~ 85 (85)
++....+. .+...+..++|+|.
T Consensus 130 g~~~~~~~~~~~~~~~~~~~~~~spd 155 (365)
T 1jof_A 130 GKLEKNVQNYEYQENTGIHGMVFDPT 155 (365)
T ss_dssp CCEEEEEEEEECCTTCCEEEEEECTT
T ss_pred CcCcceEeeEEeCCCCcceEEEECCC
Confidence 54433332 13457788888873
No 176
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=98.61 E-value=2.4e-07 Score=52.87 Aligned_cols=83 Identities=11% Similarity=-0.011 Sum_probs=54.1
Q ss_pred CceeE-----EeeCCCcEEEeeCCCceee-eeeeccCCCcEEEEEecCCCCEEEEEcCCCe-------------EEEEEc
Q psy7058 1 MGLLA-----TTSADQTARIWNTEDFSLV-RELGTANQRWVWDAAFTLDSKFLLTASSDGV-------------ARLWNI 61 (85)
Q Consensus 1 g~~l~-----~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------i~~~~~ 61 (85)
|++|+ .|+.+..|++||+.+++.. ..... ......+.|+|||+.++..+.+.. |++|++
T Consensus 132 G~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~--~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l 209 (695)
T 2bkl_A 132 GKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIE--GGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTL 209 (695)
T ss_dssp SSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBS--CCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEET
T ss_pred CCEEEEEECCCCCceEEEEEEECCCCCCcCCcccC--cccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEEC
Confidence 45565 4444578999999988765 21111 111257899999999988877655 999999
Q ss_pred CCccc----cccccccccceeEEEEeCC
Q psy7058 62 ETGEV----DKEYSGHQKAITSLAFCDF 85 (85)
Q Consensus 62 ~~~~~----~~~~~~~~~~v~~~~~~~~ 85 (85)
.++.. +.....+...+..+.|+|.
T Consensus 210 ~t~~~~~~lv~~~~~~~~~~~~~~~SpD 237 (695)
T 2bkl_A 210 GTEPSKDTVVHERTGDPTTFLQSDLSRD 237 (695)
T ss_dssp TSCGGGCEEEECCCCCTTCEEEEEECTT
T ss_pred CCCchhceEEEecCCCCEEEEEEEECCC
Confidence 87653 2222233456777788763
No 177
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=98.60 E-value=1.6e-06 Score=49.09 Aligned_cols=66 Identities=14% Similarity=0.059 Sum_probs=44.6
Q ss_pred CceeEEeeCC--------CcEEEeeCC-Cc--eeeeeeeccCCCcEEEEEecCCCCEEEEEcCCC--eEEEEEcCCccc
Q psy7058 1 MGLLATTSAD--------QTARIWNTE-DF--SLVRELGTANQRWVWDAAFTLDSKFLLTASSDG--VARLWNIETGEV 66 (85)
Q Consensus 1 g~~l~~~~~~--------~~i~~~d~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~i~~~~~~~~~~ 66 (85)
|++|+.++.+ ..|++||+. ++ .....+...+...+..+.|+|||+++++++.++ .|..|+...++.
T Consensus 199 G~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~ 277 (662)
T 3azo_A 199 GRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAA 277 (662)
T ss_dssp SSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCE
T ss_pred CCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCce
Confidence 4667766644 479999998 56 133333332456689999999999777887777 566666655543
No 178
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=98.60 E-value=5.4e-06 Score=43.52 Aligned_cols=74 Identities=11% Similarity=0.010 Sum_probs=51.9
Q ss_pred CcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCcc-ccccc---------cccccceeEE
Q psy7058 11 QTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGE-VDKEY---------SGHQKAITSL 80 (85)
Q Consensus 11 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~---------~~~~~~v~~~ 80 (85)
+.|.+||..+++.........-.....+++++++.++++...++.|+.|+..... .+..+ ..+......+
T Consensus 69 ~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~i 148 (329)
T 3fvz_A 69 DTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDV 148 (329)
T ss_dssp CCEEEECTTTCCEEEEECTTTCSSEEEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEE
T ss_pred CcEEEEECCCCeEEeccCCCccCCceEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEE
Confidence 3799999988887665543333467899999999988888888999999975332 33333 1233356677
Q ss_pred EEeC
Q psy7058 81 AFCD 84 (85)
Q Consensus 81 ~~~~ 84 (85)
+++|
T Consensus 149 a~~~ 152 (329)
T 3fvz_A 149 AVEP 152 (329)
T ss_dssp EECT
T ss_pred EEeC
Confidence 7765
No 179
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.60 E-value=4.3e-07 Score=48.39 Aligned_cols=60 Identities=15% Similarity=0.260 Sum_probs=46.9
Q ss_pred CCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEc----------CCCeEEEEEcCCcccccccc
Q psy7058 9 ADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTAS----------SDGVARLWNIETGEVDKEYS 71 (85)
Q Consensus 9 ~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~i~~~~~~~~~~~~~~~ 71 (85)
.|+.+++||..+++....+.. ...+ .+.++|++++++.+. .++.|.+||..+.+....+.
T Consensus 29 ~d~~v~v~D~~t~~~~~~i~~-g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~ 98 (361)
T 2oiz_A 29 TESRVHVYDYTNGKFLGMVPT-AFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEIS 98 (361)
T ss_dssp GGCEEEEEETTTCCEEEEEEC-CEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEE
T ss_pred ccCeEEEEECCCCeEEEEecC-CCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEE
Confidence 367899999999888877765 3333 899999999988875 25679999998877666554
No 180
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=98.49 E-value=1.1e-05 Score=41.28 Aligned_cols=81 Identities=10% Similarity=0.246 Sum_probs=54.4
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeecc-CCCcEEEEEecCCCCEEEEEcCCC-eEEEEEcCCccccccccccc--cce
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTA-NQRWVWDAAFTLDSKFLLTASSDG-VARLWNIETGEVDKEYSGHQ--KAI 77 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~~~~~~~~--~~v 77 (85)
+.+++...++.|++||.. ++....+... .......++++++|.++++...++ .|.+|+. +++.+..+..+. ..+
T Consensus 176 ~l~v~~~~~~~i~~~~~~-g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~ 253 (286)
T 1q7f_A 176 EIFISDNRAHCVKVFNYE-GQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQC 253 (286)
T ss_dssp EEEEEEGGGTEEEEEETT-CCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESSCCSCE
T ss_pred CEEEEECCCCEEEEEcCC-CCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEEEEcccCCCCcc
Confidence 455666678899999974 4554444331 124578999999999888887775 9999995 455555554332 235
Q ss_pred eEEEEeC
Q psy7058 78 TSLAFCD 84 (85)
Q Consensus 78 ~~~~~~~ 84 (85)
..++++|
T Consensus 254 ~~i~~~~ 260 (286)
T 1q7f_A 254 FDVALMD 260 (286)
T ss_dssp EEEEEET
T ss_pred eeEEECC
Confidence 6777765
No 181
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=98.48 E-value=1.2e-05 Score=41.19 Aligned_cols=73 Identities=12% Similarity=0.210 Sum_probs=50.4
Q ss_pred CCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCcccccccc--ccccceeEEEEeC
Q psy7058 10 DQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYS--GHQKAITSLAFCD 84 (85)
Q Consensus 10 ~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~--~~~~~v~~~~~~~ 84 (85)
++.|.+|| .+++....+..........+.+++++..+++...++.|.+|+.. ++....+. .+...+..++++|
T Consensus 99 ~~~i~~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~ 173 (286)
T 1q7f_A 99 THQIQIYN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVND 173 (286)
T ss_dssp GCEEEEEC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECS
T ss_pred CCEEEEEC-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEECC
Confidence 78899999 55666655543333467899999999988887788999999964 44444432 2334566777665
No 182
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=98.44 E-value=1.6e-05 Score=42.19 Aligned_cols=82 Identities=10% Similarity=-0.027 Sum_probs=56.4
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEE--EecCCCCEEEEE----------------------cCCCeE
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDA--AFTLDSKFLLTA----------------------SSDGVA 56 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~----------------------~~~~~i 56 (85)
|+.|+.++.++.+++||+.+++....... ....+... .+++++..++.. ..+..|
T Consensus 92 g~~l~~~~~~~~l~~~d~~~g~~~~~~~~-~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 170 (388)
T 3pe7_A 92 DDALFYVKDGRNLMRVDLATLEENVVYQV-PAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRL 170 (388)
T ss_dssp SSEEEEEETTTEEEEEETTTCCEEEEEEC-CTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEE
T ss_pred CCEEEEEeCCCeEEEEECCCCcceeeeec-hhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceE
Confidence 46788888888999999998877655543 33333333 348899887642 234679
Q ss_pred EEEEcCCccccccccccccceeEEEEeC
Q psy7058 57 RLWNIETGEVDKEYSGHQKAITSLAFCD 84 (85)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 84 (85)
.+||+.+++.. .+..+...+..++|+|
T Consensus 171 ~~~d~~~g~~~-~l~~~~~~~~~~~~sp 197 (388)
T 3pe7_A 171 MRVDLKTGEST-VILQENQWLGHPIYRP 197 (388)
T ss_dssp EEEETTTCCEE-EEEEESSCEEEEEEET
T ss_pred EEEECCCCceE-EeecCCccccccEECC
Confidence 99999877543 3334556678888887
No 183
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=98.38 E-value=1.4e-05 Score=41.18 Aligned_cols=61 Identities=5% Similarity=0.019 Sum_probs=47.8
Q ss_pred eeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccc
Q psy7058 3 LLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEV 66 (85)
Q Consensus 3 ~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 66 (85)
+++++..++.|..||..++ ...+.. ....+..+.+++++.++++...++.|.+|+..+++.
T Consensus 42 l~~~~~~~~~i~~~~~~~~--~~~~~~-~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~ 102 (296)
T 3e5z_A 42 VIFSDVRQNRTWAWSDDGQ--LSPEMH-PSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEW 102 (296)
T ss_dssp EEEEEGGGTEEEEEETTSC--EEEEES-SCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCE
T ss_pred EEEEeCCCCEEEEEECCCC--eEEEEC-CCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCcE
Confidence 5677788899999998876 444443 445688999999999888777778999999876653
No 184
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=98.35 E-value=1e-05 Score=42.40 Aligned_cols=77 Identities=14% Similarity=0.120 Sum_probs=49.6
Q ss_pred CceeEEeeCC--------CcEEEeeCCCceeeeeeeccCCCcEEE-EEecCCCCEEEEEcCCCeEEEEEcCCcccccccc
Q psy7058 1 MGLLATTSAD--------QTARIWNTEDFSLVRELGTANQRWVWD-AAFTLDSKFLLTASSDGVARLWNIETGEVDKEYS 71 (85)
Q Consensus 1 g~~l~~~~~~--------~~i~~~d~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 71 (85)
|++|+..+.+ ..|.+|| +++... +...+...+.. +.|+ ++ .++++..++.+++| +.+++. ..+.
T Consensus 226 g~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~-l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~g~~-~~~~ 298 (347)
T 2gop_A 226 GERILLYGKPEKKYMSEHNKLYIYD--GKEVMG-ILDEVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWDGEI-KPIA 298 (347)
T ss_dssp SSCEEEEECCSSSCCCSSCEEEEEC--SSCEEE-SSTTCCSEEEEEEEET-TE-EEEEEEETTEEEEE-EESSSE-EEEE
T ss_pred CCEEEEEEccccCCccccceEEEEC--CCceEe-ccccCCcccCCccEEc-Cc-EEEEEecCCcEEEE-EcCCce-EEEe
Confidence 4556555533 3688888 454433 32224556775 8899 88 88888899999999 875543 3333
Q ss_pred ccccceeEEEEeC
Q psy7058 72 GHQKAITSLAFCD 84 (85)
Q Consensus 72 ~~~~~v~~~~~~~ 84 (85)
.+...|.+++|+|
T Consensus 299 ~~~~~v~~~~~s~ 311 (347)
T 2gop_A 299 KGRHWIMGFDVDE 311 (347)
T ss_dssp CSSSEEEEEEESS
T ss_pred cCCCeEEeeeeeC
Confidence 3466777777765
No 185
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.31 E-value=4.5e-05 Score=40.14 Aligned_cols=72 Identities=10% Similarity=0.057 Sum_probs=50.2
Q ss_pred CcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccc-c-ccccccceeEEEEeC
Q psy7058 11 QTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDK-E-YSGHQKAITSLAFCD 84 (85)
Q Consensus 11 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~-~~~~~~~v~~~~~~~ 84 (85)
+.|.++|..+++....+..........++++|++..+..... .|.++|..+++... . +.........++++|
T Consensus 203 ~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp 276 (328)
T 3dsm_A 203 PSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN--DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNP 276 (328)
T ss_dssp CEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS--SEEEEETTCSSCCSSCSBCCCSSCEEEEEECT
T ss_pred ceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc--EEEEEECCCCceeeeeeecCCCCceEEEEEcC
Confidence 689999999888776665422335789999999988877665 89999998776432 1 111134566777765
No 186
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.31 E-value=4.8e-05 Score=43.15 Aligned_cols=69 Identities=14% Similarity=0.030 Sum_probs=53.6
Q ss_pred CceeEEeeCCCcEEEeeCC--CceeeeeeeccCCCcEEEEEec----CCCCEEEEEcC-CCeEEEEEcCCcccccccc
Q psy7058 1 MGLLATTSADQTARIWNTE--DFSLVRELGTANQRWVWDAAFT----LDSKFLLTASS-DGVARLWNIETGEVDKEYS 71 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~--~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~~ 71 (85)
|+++++++.++.|.+||+. +.+...++.. ......+.++ |+|++++++.. ++.+.++|..+.+.+..+.
T Consensus 208 Gr~lyv~~~dg~V~viD~~~~t~~~v~~i~~--G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~ 283 (567)
T 1qks_A 208 GRYLFVIGRDGKVNMIDLWMKEPTTVAEIKI--GSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQS 283 (567)
T ss_dssp SCEEEEEETTSEEEEEETTSSSCCEEEEEEC--CSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEE
T ss_pred CCEEEEEcCCCeEEEEECCCCCCcEeEEEec--CCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEe
Confidence 5678888899999999995 7777777765 2235789999 69998876654 5899999988877766554
No 187
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.29 E-value=2.1e-05 Score=41.41 Aligned_cols=80 Identities=13% Similarity=-0.001 Sum_probs=56.4
Q ss_pred eeEEee--CCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCC----------CeEEEEEcCCccccccc
Q psy7058 3 LLATTS--ADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSD----------GVARLWNIETGEVDKEY 70 (85)
Q Consensus 3 ~l~~~~--~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~i~~~~~~~~~~~~~~ 70 (85)
.+..+. .++.|.++|..+++....+... .....+.++++|+++++...+ +.|.++|..+++....+
T Consensus 142 ~lyv~~~~~~~~v~viD~~t~~~~~~i~~g--~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~ 219 (328)
T 3dsm_A 142 YVYVNCWSYQNRILKIDTETDKVVDELTIG--IQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQF 219 (328)
T ss_dssp EEEEEECTTCCEEEEEETTTTEEEEEEECS--SCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEE
T ss_pred EEEEEcCCCCCEEEEEECCCCeEEEEEEcC--CCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEE
Confidence 444444 4789999999998887776642 234678889999877766544 78999999888766555
Q ss_pred ccc-ccceeEEEEeC
Q psy7058 71 SGH-QKAITSLAFCD 84 (85)
Q Consensus 71 ~~~-~~~v~~~~~~~ 84 (85)
... ....+.++|+|
T Consensus 220 ~~~~g~~p~~la~~~ 234 (328)
T 3dsm_A 220 KFKLGDWPSEVQLNG 234 (328)
T ss_dssp ECCTTCCCEEEEECT
T ss_pred ecCCCCCceeEEEec
Confidence 422 23567788776
No 188
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.29 E-value=3.8e-06 Score=44.51 Aligned_cols=67 Identities=12% Similarity=-0.021 Sum_probs=44.9
Q ss_pred CceeEEeeCC---CcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccc
Q psy7058 1 MGLLATTSAD---QTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDK 68 (85)
Q Consensus 1 g~~l~~~~~~---~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 68 (85)
|++|+..... ..+.+||+.+++....... .........|+|+|+.++..+.++.+++|++..++...
T Consensus 47 G~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~-~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~ 116 (396)
T 3c5m_A 47 GKKLLFAGDFDGNRNYYLLNLETQQAVQLTEG-KGDNTFGGFISTDERAFFYVKNELNLMKVDLETLEEQV 116 (396)
T ss_dssp SCEEEEEECTTSSCEEEEEETTTTEEEECCCS-SCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCCEEE
T ss_pred CCEEEEEEecCCCceEEEEECCCCcEEEeecC-CCCccccceECCCCCEEEEEEcCCcEEEEECCCCCcEE
Confidence 4555554332 3688889888765443322 22212236799999999998888899999998776443
No 189
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.27 E-value=1.5e-06 Score=46.51 Aligned_cols=67 Identities=15% Similarity=0.076 Sum_probs=42.9
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccc
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEY 70 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 70 (85)
++.+++++.|+.++.||..+++..-++.. ..+.+..+..++..++.++.++.++.||..+++.+..+
T Consensus 9 ~~~v~~gs~dg~v~a~d~~tG~~~W~~~~---~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~ 75 (369)
T 2hz6_A 9 ETLLFVSTLDGSLHAVSKRTGSIKWTLKE---DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKL 75 (369)
T ss_dssp TTEEEEEETTSEEEEEETTTCCEEEEEEC---CCSCCCC-----CCEEECTTTCCEEEC-----CCSEEC
T ss_pred CCEEEEEcCCCEEEEEECCCCCEEEEecC---CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeee
Confidence 46788999999999999999988777654 22333334456767777789999999999877654433
No 190
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=98.26 E-value=2.1e-05 Score=40.55 Aligned_cols=77 Identities=12% Similarity=0.055 Sum_probs=52.1
Q ss_pred ceeEEeeCCCcEEEeeCC-Ccee---eeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccce
Q psy7058 2 GLLATTSADQTARIWNTE-DFSL---VRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAI 77 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v 77 (85)
+.+++...++.|.+|++. +++. ...+ .........++++++|.+.++. ++.|.+|+.. ++.+..+..+.. +
T Consensus 184 ~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~-~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~-g~~~~~~~~~~~-~ 258 (296)
T 3e5z_A 184 NLLVSDTGDNATHRYCLNARGETEYQGVHF-TVEPGKTDGLRVDAGGLIWASA--GDGVHVLTPD-GDELGRVLTPQT-T 258 (296)
T ss_dssp CEEEEETTTTEEEEEEECSSSCEEEEEEEE-CCSSSCCCSEEEBTTSCEEEEE--TTEEEEECTT-SCEEEEEECSSC-C
T ss_pred CEEEEeCCCCeEEEEEECCCCcCcCCCeEe-eCCCCCCCeEEECCCCCEEEEc--CCeEEEECCC-CCEEEEEECCCC-c
Confidence 455666677889999986 4443 2223 2133345678999999876665 7899999986 666666665555 7
Q ss_pred eEEEEe
Q psy7058 78 TSLAFC 83 (85)
Q Consensus 78 ~~~~~~ 83 (85)
.+++|.
T Consensus 259 ~~~~f~ 264 (296)
T 3e5z_A 259 SNLCFG 264 (296)
T ss_dssp CEEEEE
T ss_pred eeEEEE
Confidence 777773
No 191
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.25 E-value=5.4e-05 Score=39.13 Aligned_cols=68 Identities=13% Similarity=0.113 Sum_probs=54.1
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCcccccccc
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYS 71 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 71 (85)
|+++++...++.+..||.. ++.+.++... .....+...+++..++++..++.|..+|..+++.+.++.
T Consensus 136 G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~--~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~ 203 (276)
T 3no2_A 136 GNYLVPLFATSEVREIAPN-GQLLNSVKLS--GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVN 203 (276)
T ss_dssp SCEEEEETTTTEEEEECTT-SCEEEEEECS--SCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEE
T ss_pred CCEEEEecCCCEEEEECCC-CCEEEEEECC--CCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEec
Confidence 4678888889999999988 8888777652 234456778899999988888899999998888776664
No 192
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.19 E-value=7.4e-05 Score=40.24 Aligned_cols=57 Identities=7% Similarity=-0.060 Sum_probs=44.1
Q ss_pred cEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEc----------CCCeEEEEEcCCcccccccc
Q psy7058 12 TARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTAS----------SDGVARLWNIETGEVDKEYS 71 (85)
Q Consensus 12 ~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~i~~~~~~~~~~~~~~~ 71 (85)
.+.++|..+++....+... ..+ .+.++||++.++... .++.|.++|..+.+....+.
T Consensus 48 ~v~v~D~~t~~~~~~i~~g-~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~ 114 (373)
T 2mad_H 48 QQWVLDAGSGSILGHVNGG-FLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIE 114 (373)
T ss_pred EEEEEECCCCeEEEEecCC-CCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEE
Confidence 7899999999888777653 233 899999999988775 35789999998776665443
No 193
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=98.19 E-value=1.4e-05 Score=41.67 Aligned_cols=73 Identities=12% Similarity=0.124 Sum_probs=49.6
Q ss_pred eCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEEEEeC
Q psy7058 8 SADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSLAFCD 84 (85)
Q Consensus 8 ~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 84 (85)
+.++.++.| .++....+.. .......+.|++++.+++++..++.|.+||...++.......+...+..++++|
T Consensus 24 ~~~~~~~~~---~~~~~~~~~~-~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~ 96 (333)
T 2dg1_A 24 ISESELQTI---TAEPWLEISK-KGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHK 96 (333)
T ss_dssp CCGGGSCEE---ECEEEEEEES-SCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECT
T ss_pred eecccCccc---ccceeEEEec-cCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECC
Confidence 445566666 2344444444 344578999999999888888889999999887664433323456778888765
No 194
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.16 E-value=2.1e-05 Score=42.72 Aligned_cols=59 Identities=10% Similarity=-0.010 Sum_probs=47.1
Q ss_pred CCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEc----------CCCeEEEEEcCCcccccccc
Q psy7058 10 DQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTAS----------SDGVARLWNIETGEVDKEYS 71 (85)
Q Consensus 10 ~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~i~~~~~~~~~~~~~~~ 71 (85)
++.+.+.|..+.+.+..+..+.. + . +.++|+|+.++.+. .++.|.+||..+.+....+.
T Consensus 58 ~~~V~ViD~~t~~v~~~I~vG~~-P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~ 126 (386)
T 3sjl_D 58 VTQQFVIDGEAGRVIGMIDGGFL-P-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIE 126 (386)
T ss_dssp SEEEEEEETTTTEEEEEEEECSS-C-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEE
T ss_pred CCEEEEEECCCCeEEEEEECCCC-C-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEE
Confidence 67899999999999988886443 3 4 99999999887665 35689999999888766654
No 195
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.16 E-value=9.9e-05 Score=38.09 Aligned_cols=79 Identities=8% Similarity=0.085 Sum_probs=53.2
Q ss_pred EEeeCCCcEEEeeCC-Ccee-----eeeeeccCC-CcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccce
Q psy7058 5 ATTSADQTARIWNTE-DFSL-----VRELGTANQ-RWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAI 77 (85)
Q Consensus 5 ~~~~~~~~i~~~d~~-~~~~-----~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v 77 (85)
++...++.|.+||.. +++. ...+.. .. .....++++++|.+.++...++.|..|+..+++....+..+...+
T Consensus 192 v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~-~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~ 270 (314)
T 1pjx_A 192 VAETPTKKLWSYDIKGPAKIENKKVWGHIPG-THEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRCPFEKP 270 (314)
T ss_dssp EEETTTTEEEEEEEEETTEEEEEEEEEECCC-CSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEECSSSCE
T ss_pred EEECCCCeEEEEECCCCCccccceEEEECCC-CCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCCCcEeEEEeCCCCCc
Confidence 344456789999865 3332 111111 22 457889999999988887778899999987676665555555677
Q ss_pred eEEEEeC
Q psy7058 78 TSLAFCD 84 (85)
Q Consensus 78 ~~~~~~~ 84 (85)
.+++|+|
T Consensus 271 ~~i~~~~ 277 (314)
T 1pjx_A 271 SNLHFKP 277 (314)
T ss_dssp EEEEECT
T ss_pred eeEEECC
Confidence 7787765
No 196
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.15 E-value=9.8e-05 Score=37.36 Aligned_cols=82 Identities=10% Similarity=-0.049 Sum_probs=51.7
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEEE
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSLA 81 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~ 81 (85)
+.+++...++.|.+||............ .......++++++|..+++...++.|..|+............+...+..++
T Consensus 162 ~l~v~~~~~~~i~~~~~~~~~~~~~~~~-~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~ 240 (270)
T 1rwi_B 162 NVYVTDTDNNRVVKLEAESNNQVVLPFT-DITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVA 240 (270)
T ss_dssp CEEEEEGGGTEEEEECTTTCCEEECCCS-SCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEE
T ss_pred CEEEEECCCCEEEEEecCCCceEeeccc-CCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEE
Confidence 4455555567899999776554332222 224578999999998777777788999999865432221112224566676
Q ss_pred EeC
Q psy7058 82 FCD 84 (85)
Q Consensus 82 ~~~ 84 (85)
+++
T Consensus 241 ~~~ 243 (270)
T 1rwi_B 241 VDS 243 (270)
T ss_dssp ECT
T ss_pred ECC
Confidence 654
No 197
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.13 E-value=0.00015 Score=39.06 Aligned_cols=57 Identities=12% Similarity=0.050 Sum_probs=47.3
Q ss_pred CcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCC-EEEEEc-CCCeEEEEEcCCcccccc
Q psy7058 11 QTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSK-FLLTAS-SDGVARLWNIETGEVDKE 69 (85)
Q Consensus 11 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~i~~~~~~~~~~~~~ 69 (85)
+.|.++|+.+.+.+..+.. ......+.|+|||+ .++++. .++.|.++|..+++.+..
T Consensus 298 ~~V~VID~~t~~vv~~i~~--g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~ 356 (373)
T 2mad_H 298 KEVTSVTGLVGQTSSQISL--GHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQS 356 (373)
T ss_pred CeEEEEECCCCEEEEEEEC--CCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEee
Confidence 5799999999998888865 23478999999999 677766 489999999999988877
No 198
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.12 E-value=5.4e-06 Score=43.94 Aligned_cols=82 Identities=10% Similarity=-0.012 Sum_probs=52.7
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEE-------------------EEecCCCCEEEEE-----cCCCeE
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQRWVWD-------------------AAFTLDSKFLLTA-----SSDGVA 56 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~-----~~~~~i 56 (85)
|++|+..+.++.+++||+.+++....... ....... ..++|++..++.. ..+..|
T Consensus 92 g~~l~~~~~~~~l~~~d~~~~~~~~~~~~-~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l 170 (396)
T 3c5m_A 92 ERAFFYVKNELNLMKVDLETLEEQVIYTV-DEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRL 170 (396)
T ss_dssp SSEEEEEETTTEEEEEETTTCCEEEEEEC-CTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEE
T ss_pred CCEEEEEEcCCcEEEEECCCCCcEEEEec-ccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceE
Confidence 46788888888999999988766544432 2221212 3456777665543 345689
Q ss_pred EEEEcCCccccccccccccceeEEEEeC
Q psy7058 57 RLWNIETGEVDKEYSGHQKAITSLAFCD 84 (85)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 84 (85)
.+||+..++..... .+...+..+.|+|
T Consensus 171 ~~~d~~~g~~~~~~-~~~~~~~~~~~sp 197 (396)
T 3c5m_A 171 IKVDIETGELEVIH-QDTAWLGHPIYRP 197 (396)
T ss_dssp EEEETTTCCEEEEE-EESSCEEEEEEET
T ss_pred EEEECCCCcEEeec-cCCcccccceECC
Confidence 99999877644333 3556677788876
No 199
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.09 E-value=3.7e-05 Score=41.50 Aligned_cols=57 Identities=9% Similarity=-0.231 Sum_probs=47.4
Q ss_pred cEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEc----------CCCeEEEEEcCCcccccccc
Q psy7058 12 TARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTAS----------SDGVARLWNIETGEVDKEYS 71 (85)
Q Consensus 12 ~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~i~~~~~~~~~~~~~~~ 71 (85)
.+.+.|..+++.+.++..+.. + .+.++|+++.++.+. .++.|.++|..+++....+.
T Consensus 47 ~vsvID~~t~~v~~~i~vG~~-P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~ 113 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAFL-S--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIE 113 (368)
T ss_dssp EEEEEETTTTEEEEEEEECTT-C--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEE
T ss_pred eEEEEECCCCeEEEEEeCCCC-C--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEE
Confidence 788999999999999887443 4 799999999888775 36789999999998877765
No 200
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.04 E-value=0.0001 Score=40.09 Aligned_cols=70 Identities=10% Similarity=0.071 Sum_probs=52.4
Q ss_pred CcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCC-EEEEE-cCCCeEEEEEcCCccccccccccccceeEEEEe
Q psy7058 11 QTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSK-FLLTA-SSDGVARLWNIETGEVDKEYSGHQKAITSLAFC 83 (85)
Q Consensus 11 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~ 83 (85)
..|.+.|+.+.+.+..+..+ ...+.+.++++++ .+++. ..++.|.++|..+++.+.++... ..-+.|.++
T Consensus 311 ~~V~viD~~t~kv~~~i~vg--~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~~~-~~p~~l~~s 382 (386)
T 3sjl_D 311 RFVVVLDAKTGERLAKFEMG--HEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQL-GHGPQVITT 382 (386)
T ss_dssp EEEEEEETTTCCEEEEEEEE--EEECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEEECCC-CSSCCEEEE
T ss_pred CEEEEEECCCCeEEEEEECC--CCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEecCC-CCCceeEEC
Confidence 56889999999999888763 3578999999986 56554 45889999999999988877632 333334444
No 201
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.02 E-value=0.00018 Score=37.31 Aligned_cols=80 Identities=11% Similarity=0.044 Sum_probs=56.1
Q ss_pred eEEeeCCCcEEEeeC--CCceee--eeeec--cCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccce
Q psy7058 4 LATTSADQTARIWNT--EDFSLV--RELGT--ANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAI 77 (85)
Q Consensus 4 l~~~~~~~~i~~~d~--~~~~~~--~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v 77 (85)
+++...++.|..||. .++... ..+.. ........+++.++|.+.++....+.|..|+..+++.+..+......+
T Consensus 164 yv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~~~~ 243 (297)
T 3g4e_A 164 YYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPVDKT 243 (297)
T ss_dssp EEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECSSSBE
T ss_pred EEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECCCCCc
Confidence 345556678888886 444332 11111 123456789999999888777778889999998888887777666778
Q ss_pred eEEEEe
Q psy7058 78 TSLAFC 83 (85)
Q Consensus 78 ~~~~~~ 83 (85)
++++|.
T Consensus 244 t~~~f~ 249 (297)
T 3g4e_A 244 TSCCFG 249 (297)
T ss_dssp EEEEEE
T ss_pred eEEEEe
Confidence 899986
No 202
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=98.01 E-value=0.00023 Score=41.07 Aligned_cols=51 Identities=8% Similarity=0.041 Sum_probs=36.0
Q ss_pred EEEeeCCCceee--eeeecc-CCCcEEEEEecCCCCEEEEEcC-----CCeEEEEEcCC
Q psy7058 13 ARIWNTEDFSLV--RELGTA-NQRWVWDAAFTLDSKFLLTASS-----DGVARLWNIET 63 (85)
Q Consensus 13 i~~~d~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-----~~~i~~~~~~~ 63 (85)
|++|++.+++.. ...... +......+.|+|+|++++..+. +..+++||+..
T Consensus 210 v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~ 268 (710)
T 2xdw_A 210 LYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQ 268 (710)
T ss_dssp EEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGG
T ss_pred EEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcc
Confidence 999999876532 111211 3445788999999998877654 56899999876
No 203
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.00 E-value=4.1e-05 Score=42.09 Aligned_cols=58 Identities=9% Similarity=-0.053 Sum_probs=46.9
Q ss_pred CcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEc----------CCCeEEEEEcCCcccccccc
Q psy7058 11 QTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTAS----------SDGVARLWNIETGEVDKEYS 71 (85)
Q Consensus 11 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~i~~~~~~~~~~~~~~~ 71 (85)
+.+.++|..+.+.+..+..+. .+ .+.++||++.++.+. .++.|.++|..+.+....+.
T Consensus 99 ~~VsVID~~t~~vv~~I~vG~-~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~ 166 (426)
T 3c75_H 99 TQQFVIDGSTGRILGMTDGGF-LP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIE 166 (426)
T ss_dssp EEEEEEETTTTEEEEEEEECS-SC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEE
T ss_pred CeEEEEECCCCEEEEEEECCC-CC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEE
Confidence 689999999999999888733 34 799999999887765 36689999999887766553
No 204
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=97.98 E-value=0.00017 Score=36.51 Aligned_cols=64 Identities=6% Similarity=-0.098 Sum_probs=45.3
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccc
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEV 66 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 66 (85)
..+++...++.|.+||........ ...........++++++|..+++...++.|++++....+.
T Consensus 204 ~l~v~~~~~~~v~~~~~~~~~~~~-~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~~~ 267 (270)
T 1rwi_B 204 TVYVTEHNTNQVVKLLAGSTTSTV-LPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLEHHH 267 (270)
T ss_dssp CEEEEETTTSCEEEECTTCSCCEE-CCCCSCSCEEEEEECTTCCEEEEEGGGTEEEEECCCGGGS
T ss_pred CEEEEECCCCcEEEEcCCCCccee-eccCCCCCceeEEECCCCCEEEEECCCCEEEEEcCCCccc
Confidence 345555567789999986544332 2211224578999999999888888899999999876553
No 205
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=97.97 E-value=6.9e-05 Score=43.40 Aligned_cols=82 Identities=15% Similarity=0.006 Sum_probs=49.3
Q ss_pred CceeEEeeCC-----CcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCC--------------eEEEEEc
Q psy7058 1 MGLLATTSAD-----QTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDG--------------VARLWNI 61 (85)
Q Consensus 1 g~~l~~~~~~-----~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~i~~~~~ 61 (85)
|++|+.+..+ ..|++||+.+++...... .......+.|+|| +.++.+..+. .|++|++
T Consensus 174 G~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~--~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~l 250 (741)
T 1yr2_A 174 GRLLAYSVQDGGSDWRTVKFVGVADGKPLADEL--KWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRL 250 (741)
T ss_dssp SSEEEEEEEETTCSEEEEEEEETTTCCEEEEEE--EEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEET
T ss_pred CCEEEEEEcCCCCceEEEEEEECCCCCCCCccC--CCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEEC
Confidence 4556554433 359999999887754321 1111246889999 8887776544 3888998
Q ss_pred CCcccc--ccccc--cccceeEEEEeCC
Q psy7058 62 ETGEVD--KEYSG--HQKAITSLAFCDF 85 (85)
Q Consensus 62 ~~~~~~--~~~~~--~~~~v~~~~~~~~ 85 (85)
.++... ..+.. +...+..+.|+|.
T Consensus 251 gt~~~~~~lv~~~~~~~~~~~~~~~SpD 278 (741)
T 1yr2_A 251 GTPQSADQPVFATPELPKRGHGASVSSD 278 (741)
T ss_dssp TSCGGGCEEEECCTTCTTCEEEEEECTT
T ss_pred CCCchhCEEEeccCCCCeEEEEEEECCC
Confidence 765421 12222 2224667777763
No 206
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=97.97 E-value=0.00024 Score=38.42 Aligned_cols=70 Identities=7% Similarity=-0.059 Sum_probs=51.9
Q ss_pred CcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCC-EEEEEc-CCCeEEEEEcCCccccccccccccceeEEEEe
Q psy7058 11 QTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSK-FLLTAS-SDGVARLWNIETGEVDKEYSGHQKAITSLAFC 83 (85)
Q Consensus 11 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~ 83 (85)
..+.++|+.+.+.+..+..+. ....+.++++++ .+++.. .++.|.++|+.+.+.+..+.... .-..+++.
T Consensus 294 ~~~~ViD~~t~~vv~~i~vg~--~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~vg~-~P~~i~~~ 365 (368)
T 1mda_H 294 ENTSSVTASVGQTSGPISNGH--DSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVELDK-GPESLSVQ 365 (368)
T ss_dssp EEEEEEESSSCCEEECCEEEE--EECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECCCCS-CCCEEECC
T ss_pred CCEEEEECCCCeEEEEEECCC--CcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEEEEECCC-CCCEEEee
Confidence 345699999998888877522 478899999997 455666 58999999999999888887433 33344443
No 207
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=97.97 E-value=0.00021 Score=41.20 Aligned_cols=64 Identities=8% Similarity=-0.101 Sum_probs=41.9
Q ss_pred CceeEEeeCCCc-------------EEEeeCCCceee--eeeec-cCCCcEEEEEecCCCCEEEEEcCCC----eEEEEE
Q psy7058 1 MGLLATTSADQT-------------ARIWNTEDFSLV--RELGT-ANQRWVWDAAFTLDSKFLLTASSDG----VARLWN 60 (85)
Q Consensus 1 g~~l~~~~~~~~-------------i~~~d~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~----~i~~~~ 60 (85)
|+.|+.++.+.. |++|++.++... ..... .+...+..+.|+|+|++++..+.++ .+++++
T Consensus 179 g~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~ 258 (695)
T 2bkl_A 179 SKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKR 258 (695)
T ss_dssp SSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEEC
T ss_pred CCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEc
Confidence 456777776654 999999877632 22211 1334688999999999887766554 566666
Q ss_pred cCCc
Q psy7058 61 IETG 64 (85)
Q Consensus 61 ~~~~ 64 (85)
...+
T Consensus 259 ~~~~ 262 (695)
T 2bkl_A 259 PGEK 262 (695)
T ss_dssp TTCS
T ss_pred CCCC
Confidence 5443
No 208
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=97.81 E-value=0.0006 Score=35.17 Aligned_cols=61 Identities=8% Similarity=0.079 Sum_probs=43.9
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCE-EEEEcCCCeEEEEEcCC
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKF-LLTASSDGVARLWNIET 63 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~ 63 (85)
+++++...++.|..||..+++....+.. ....+.++.+++++.. +++...++.|..|++..
T Consensus 238 ~l~v~~~~~~~i~~~d~~~g~~~~~~~~-~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 238 NLLVANWGSSHIEVFGPDGGQPKMRIRC-PFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp CEEEEEETTTEEEEECTTCBSCSEEEEC-SSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred CEEEEEcCCCEEEEEcCCCCcEeEEEeC-CCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 4455555678899999886766555554 3356889999999984 45555668899999764
No 209
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=97.81 E-value=0.00048 Score=37.55 Aligned_cols=61 Identities=16% Similarity=0.137 Sum_probs=41.8
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCC--eEEEEEcCCcc
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDG--VARLWNIETGE 65 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~i~~~~~~~~~ 65 (85)
+++++...++.|+.||..++........ ... .. ++|++++..++.++.++ .|..++...+.
T Consensus 143 ~lyv~d~~~~~I~~id~~~g~~~~~~~~-~~~-~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~ 205 (409)
T 3hrp_A 143 TVLAYQRDDPRVRLISVDDNKVTTVHPG-FKG-GK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGW 205 (409)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEET-CCB-CB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTT
T ss_pred CEEEEecCCCcEEEEECCCCEEEEeecc-CCC-Cc-eeEecCCCcEEEEecCCCceEEEEEcCCCc
Confidence 4455556668899999887666544433 222 23 88999999888887755 78888876543
No 210
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=97.79 E-value=0.00024 Score=39.15 Aligned_cols=58 Identities=14% Similarity=0.176 Sum_probs=48.7
Q ss_pred CcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCC-EEEEEc-CCCeEEEEEcCCccccccc
Q psy7058 11 QTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSK-FLLTAS-SDGVARLWNIETGEVDKEY 70 (85)
Q Consensus 11 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~i~~~~~~~~~~~~~~ 70 (85)
+.+.+.|+.+.+.+.++... .....+.++|+++ .+++.. .++.|.++|..+.+.+..+
T Consensus 350 ~~VsVID~~T~kvv~~I~vg--~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv~tI 409 (426)
T 3c75_H 350 RFVVVLNAETGERINKIELG--HEIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEELRSV 409 (426)
T ss_dssp EEEEEEETTTCCEEEEEEEE--EEECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred CEEEEEECCCCeEEEEEECC--CCcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEEEEe
Confidence 57999999999998888752 2478899999998 777776 5899999999999988776
No 211
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=97.62 E-value=9.3e-06 Score=43.48 Aligned_cols=65 Identities=9% Similarity=0.111 Sum_probs=34.5
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCcccccccc
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYS 71 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 71 (85)
+.+++++.++.++.||..+++....+.. .. ....+|++..+++++.++.++.||..+++.+..+.
T Consensus 93 ~~v~~g~~dg~v~a~D~~tG~~~w~~~~-~~----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~ 157 (369)
T 2hz6_A 93 GILYMGKKQDIWYVIDLLTGEKQQTLSS-AF----ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNAT 157 (369)
T ss_dssp --CCCCEEEEEEEEECCC---------------------------EEEEEEEEEEECCCSSSSSCCCEEE
T ss_pred CEEEEEeCCCEEEEEECCCCcEEEEecC-CC----cccccccCCEEEEEecCCEEEEEECCCCCEEEeEe
Confidence 3566778889999999999988766554 21 13345677888888889999999999887665543
No 212
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=97.61 E-value=0.00035 Score=40.36 Aligned_cols=72 Identities=7% Similarity=0.023 Sum_probs=43.8
Q ss_pred CCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCC-------------eEEEEEcCCcccc--cccc--c
Q psy7058 10 DQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDG-------------VARLWNIETGEVD--KEYS--G 72 (85)
Q Consensus 10 ~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~i~~~~~~~~~~~--~~~~--~ 72 (85)
...|+++|+.+++....... ......+.|+ |++.++....+. .|++|++.+.... ..+. .
T Consensus 154 ~~~i~v~dl~tg~~~~~~~~--~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~ 230 (693)
T 3iuj_A 154 WREIHLMDVESKQPLETPLK--DVKFSGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIP 230 (693)
T ss_dssp EEEEEEEETTTCSEEEEEEE--EEESCCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSG
T ss_pred eEEEEEEECCCCCCCccccC--CceeccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCC
Confidence 35799999999876543211 1112467899 999888776653 4899998765431 1222 2
Q ss_pred -cccceeEEEEeC
Q psy7058 73 -HQKAITSLAFCD 84 (85)
Q Consensus 73 -~~~~v~~~~~~~ 84 (85)
+......+.|+|
T Consensus 231 ~~~~~~~~~~~Sp 243 (693)
T 3iuj_A 231 AQHHRYVGATVTE 243 (693)
T ss_dssp GGCCSEEEEEECT
T ss_pred CCCeEEEEEEEcC
Confidence 223355667766
No 213
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=97.60 E-value=0.0014 Score=33.41 Aligned_cols=82 Identities=7% Similarity=-0.090 Sum_probs=48.4
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccceeEEE
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAITSLA 81 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~ 81 (85)
+.+++...++.|.+||.. ++............+..+.+.+++...++...++.|..|+.........+......+..++
T Consensus 27 ~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~ 105 (299)
T 2z2n_A 27 KVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKKGIIKEYTLPNPDSAPYGIT 105 (299)
T ss_dssp CEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEECSSTTCCEEEEE
T ss_pred CEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCCCcEEEEeCCCcCCCceeeE
Confidence 334444446789999977 4432211111335688999999999888877788899998752211111212234555666
Q ss_pred EeC
Q psy7058 82 FCD 84 (85)
Q Consensus 82 ~~~ 84 (85)
+.+
T Consensus 106 ~~~ 108 (299)
T 2z2n_A 106 EGP 108 (299)
T ss_dssp ECT
T ss_pred ECC
Confidence 543
No 214
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=97.54 E-value=0.0018 Score=33.06 Aligned_cols=81 Identities=6% Similarity=-0.026 Sum_probs=49.0
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCcccccc-ccccccceeEE
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKE-YSGHQKAITSL 80 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~~~~v~~~ 80 (85)
+++++...++.+..||. +++............+..+.+.+++...++...++.|..++. +++.... .......+..+
T Consensus 111 ~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i 188 (299)
T 2z2n_A 111 DIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGI 188 (299)
T ss_dssp CEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEE
T ss_pred CEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeE
Confidence 34455555678888887 444332221113345789999999988877777789999998 5543321 22223345566
Q ss_pred EEeC
Q psy7058 81 AFCD 84 (85)
Q Consensus 81 ~~~~ 84 (85)
++.+
T Consensus 189 ~~~~ 192 (299)
T 2z2n_A 189 TKGN 192 (299)
T ss_dssp EECT
T ss_pred EECC
Confidence 6544
No 215
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=97.53 E-value=0.00024 Score=41.22 Aligned_cols=62 Identities=15% Similarity=0.181 Sum_probs=47.2
Q ss_pred CCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCcccccccccc
Q psy7058 10 DQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGH 73 (85)
Q Consensus 10 ~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 73 (85)
++.|..||+.+++..-+..... +...-.+...+..++.++.|+.++.||.++++.+.+++..
T Consensus 454 ~g~l~A~D~~tG~~~W~~~~~~--~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~ 515 (689)
T 1yiq_A 454 SGKLIAWDPVKQQAAWEVPYVT--IFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAA 515 (689)
T ss_dssp EEEEEEEETTTTEEEEEEEESS--SCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred ceeEEEEECCCCCeEeEccCCC--CccCccceECCCEEEEECCCCcEEEEECCCCccceeeeCC
Confidence 4789999999999887766522 2222344556778888999999999999999988877643
No 216
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=97.41 E-value=0.0033 Score=33.09 Aligned_cols=78 Identities=9% Similarity=-0.033 Sum_probs=50.9
Q ss_pred EEeeCCCcEEEeeCC--Cc-eee--eeeec--cCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccccce
Q psy7058 5 ATTSADQTARIWNTE--DF-SLV--RELGT--ANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAI 77 (85)
Q Consensus 5 ~~~~~~~~i~~~d~~--~~-~~~--~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v 77 (85)
++...++.|.+||.. ++ ... ..+.. ........+.+.++|.+.++...++.|..|+. +++.+..+......+
T Consensus 195 v~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~~~~~~ 273 (326)
T 2ghs_A 195 FVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEVPGKQT 273 (326)
T ss_dssp EEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEECSCSBE
T ss_pred EEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEECCCCCc
Confidence 444556789999975 44 321 11111 12344678899999987777666778999998 566666665555678
Q ss_pred eEEEEe
Q psy7058 78 TSLAFC 83 (85)
Q Consensus 78 ~~~~~~ 83 (85)
.+++|.
T Consensus 274 ~~~af~ 279 (326)
T 2ghs_A 274 TCPAFI 279 (326)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 888886
No 217
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.34 E-value=0.0039 Score=32.44 Aligned_cols=82 Identities=6% Similarity=0.052 Sum_probs=57.4
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccCC----CcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccc---
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTANQ----RWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQ--- 74 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~--- 74 (85)
++++.+..++.+.++|..+.+....+..... ..++.+.+. ++...+..-.++.|.+.|..+++.+..+....
T Consensus 117 ~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~ 195 (266)
T 2iwa_A 117 KILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDCIARISAKDGTLLGWILLPNLRK 195 (266)
T ss_dssp SSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHH
T ss_pred CEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEecCCCCeEEEEECCCCcEEEEEECCCccc
Confidence 4555666678999999999888777764211 136677777 77666666567899999999998776665221
Q ss_pred ----------cceeEEEEeC
Q psy7058 75 ----------KAITSLAFCD 84 (85)
Q Consensus 75 ----------~~v~~~~~~~ 84 (85)
.-.+.++|+|
T Consensus 196 ~~~~~~~~~~~v~nGIa~~~ 215 (266)
T 2iwa_A 196 KLIDEGFRDIDVLNGIAWDQ 215 (266)
T ss_dssp HHHHTTCTTCCCEEEEEEET
T ss_pred ccccccccccCceEEEEEcC
Confidence 2446788875
No 218
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.32 E-value=0.0041 Score=32.33 Aligned_cols=82 Identities=13% Similarity=0.157 Sum_probs=55.5
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccC-C---CcEEEEEecCCCCEEEEEcCCCeEEEEEcCCcccccccccc----
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTAN-Q---RWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGH---- 73 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~---- 73 (85)
+.|+.+..+..|.++|..+.+....+.... . ..++.+.+. +|...+..-.+..|.+.|..+++.+..+...
T Consensus 137 ~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~ 215 (262)
T 3nol_A 137 QYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFANVWQTNKIVRIDPETGKVTGIIDLNGILA 215 (262)
T ss_dssp SCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEECTTTCBEEEEEECTTGGG
T ss_pred CEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEEEccCCeEEEEECCCCcEEEEEECCcCcc
Confidence 445555557789999998888877765421 1 235567776 7776666656789999999998876655421
Q ss_pred --------ccceeEEEEeC
Q psy7058 74 --------QKAITSLAFCD 84 (85)
Q Consensus 74 --------~~~v~~~~~~~ 84 (85)
.+-.+.++|+|
T Consensus 216 ~~~~~~~~~~vlNGIA~dp 234 (262)
T 3nol_A 216 EAGPLPSPIDVLNGIAWDK 234 (262)
T ss_dssp GSCSCCSSCCCEEEEEEET
T ss_pred ccccccCcCCceEEEEEcC
Confidence 12447788876
No 219
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=97.24 E-value=0.0053 Score=31.84 Aligned_cols=77 Identities=9% Similarity=-0.012 Sum_probs=48.2
Q ss_pred eeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccc----ccccee
Q psy7058 3 LLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSG----HQKAIT 78 (85)
Q Consensus 3 ~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~----~~~~v~ 78 (85)
++++...++.|+.||..+++. ..+. ....+..+.+++++.+++.. +..|.+||..+++....... ....++
T Consensus 27 l~~~d~~~~~i~~~d~~~~~~-~~~~--~~~~~~~i~~~~dG~l~v~~--~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~ 101 (297)
T 3g4e_A 27 LLFVDIPAKKVCRWDSFTKQV-QRVT--MDAPVSSVALRQSGGYVATI--GTKFCALNWKEQSAVVLATVDNDKKNNRFN 101 (297)
T ss_dssp EEEEETTTTEEEEEETTTCCE-EEEE--CSSCEEEEEEBTTSSEEEEE--TTEEEEEETTTTEEEEEEECCTTCSSEEEE
T ss_pred EEEEECCCCEEEEEECCCCcE-EEEe--CCCceEEEEECCCCCEEEEE--CCeEEEEECCCCcEEEEEecCCCCCCCCCC
Confidence 455666678888999876654 2222 34568899999999965543 56888999876643211111 123456
Q ss_pred EEEEeC
Q psy7058 79 SLAFCD 84 (85)
Q Consensus 79 ~~~~~~ 84 (85)
.+++.|
T Consensus 102 di~~d~ 107 (297)
T 3g4e_A 102 DGKVDP 107 (297)
T ss_dssp EEEECT
T ss_pred CEEECC
Confidence 666654
No 220
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.17 E-value=0.0059 Score=32.55 Aligned_cols=68 Identities=10% Similarity=0.082 Sum_probs=43.1
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCcccccccc
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYS 71 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 71 (85)
+.+..++.++.+..+|..+++..-............... .+..++.++.++.+..+|..+++.+..+.
T Consensus 278 ~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~--~~~~l~v~~~~g~l~~~d~~tG~~~~~~~ 345 (376)
T 3q7m_A 278 NRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVL--YNGNLVVGDSEGYLHWINVEDGRFVAQQK 345 (376)
T ss_dssp TEEEEEETTCCEEEEETTTCCEEEEECTTTTSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred CEEEEEcCCCeEEEEECCCCcEEEeecccCCCcccCCEE--ECCEEEEEeCCCeEEEEECCCCcEEEEEe
Confidence 456666777788888888777655544211111111111 24567788889999999999888765544
No 221
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=97.15 E-value=0.0063 Score=31.06 Aligned_cols=81 Identities=5% Similarity=-0.130 Sum_probs=48.5
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCcccc-ccccccccceeEE
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVD-KEYSGHQKAITSL 80 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~v~~~ 80 (85)
+.+++...++.|.+||.. ++............+..+.+.+++...++...++.|..+|.. ++.. .........+..+
T Consensus 32 ~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~~~~i 109 (300)
T 2qc5_A 32 KVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFTEYPLPQPDSGPYGI 109 (300)
T ss_dssp CEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEE
T ss_pred CEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCeEEecCCCCCCCCccc
Confidence 344444456788888877 443321111123468889999999888777777889999876 4432 1122123445566
Q ss_pred EEeC
Q psy7058 81 AFCD 84 (85)
Q Consensus 81 ~~~~ 84 (85)
++.+
T Consensus 110 ~~~~ 113 (300)
T 2qc5_A 110 TEGL 113 (300)
T ss_dssp EECS
T ss_pred eECC
Confidence 5543
No 222
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=97.13 E-value=0.0013 Score=38.15 Aligned_cols=60 Identities=13% Similarity=0.109 Sum_probs=46.1
Q ss_pred CcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccc
Q psy7058 11 QTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSG 72 (85)
Q Consensus 11 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 72 (85)
+.|..||+.+++..-+.... .+.....+...+..++.++.++.++.||..+++.+..+..
T Consensus 457 g~l~A~D~~tG~~~W~~~~~--~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~ 516 (677)
T 1kb0_A 457 GRLLAWDPVAQKAAWSVEHV--SPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPT 516 (677)
T ss_dssp EEEEEEETTTTEEEEEEEES--SSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred cEEEEEeCCCCcEEeecCCC--CCCcCcceEeCCCEEEEECCCCcEEEEECCCCceeeeeeC
Confidence 78999999999887776542 2233344555777888889999999999999998877763
No 223
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=97.12 E-value=0.013 Score=34.27 Aligned_cols=82 Identities=7% Similarity=-0.020 Sum_probs=46.9
Q ss_pred ceeEEeeC----CCcEEEeeCCCce-eeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcC-Cccccccccc-cc
Q psy7058 2 GLLATTSA----DQTARIWNTEDFS-LVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIE-TGEVDKEYSG-HQ 74 (85)
Q Consensus 2 ~~l~~~~~----~~~i~~~d~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~-~~ 74 (85)
+.++..++ +..|.+||+.++. ....+.......+..+.+. ++.++++...++..++|.+. .+.....+.. ..
T Consensus 328 ~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~ 406 (741)
T 1yr2_A 328 DQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA-GNRLFASYIHDAKSQVLAFDLDGKPAGAVSLPGI 406 (741)
T ss_dssp TEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTEEEEEEEETTSCEEEECBCSSS
T ss_pred CEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCceeeccCCCC
Confidence 44554444 3459999987742 3333333244456677776 56677788888877777554 3444444432 23
Q ss_pred cceeEEEEeC
Q psy7058 75 KAITSLAFCD 84 (85)
Q Consensus 75 ~~v~~~~~~~ 84 (85)
..+..+.++|
T Consensus 407 ~~v~~~~~s~ 416 (741)
T 1yr2_A 407 GSASGLSGRP 416 (741)
T ss_dssp CEEEEEECCB
T ss_pred eEEEEeecCC
Confidence 4556666554
No 224
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.09 E-value=0.0084 Score=31.32 Aligned_cols=68 Identities=12% Similarity=0.065 Sum_probs=44.9
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCcccccccc
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYS 71 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 71 (85)
.++.+.+.++.|+++|+.+++...++ ......-..+.+.. .......-.++.+.++|..+.+.+.++.
T Consensus 66 ~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g-~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~ 133 (268)
T 3nok_A 66 HFFESTGHQGTLRQLSLESAQPVWME-RLGNIFAEGLASDG-ERLYQLTWTEGLLFTWSGMPPQRERTTR 133 (268)
T ss_dssp EEEEEETTTTEEEECCSSCSSCSEEE-ECTTCCEEEEEECS-SCEEEEESSSCEEEEEETTTTEEEEEEE
T ss_pred EEEEEcCCCCEEEEEECCCCcEEeEE-CCCCcceeEEEEeC-CEEEEEEccCCEEEEEECCcCcEEEEEe
Confidence 35677888888999999999888777 32221123344432 2333344467888899988887776665
No 225
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=97.08 E-value=0.0077 Score=30.72 Aligned_cols=80 Identities=6% Similarity=0.018 Sum_probs=47.7
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeec-cCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCcccc-ccccccccceeE
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGT-ANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVD-KEYSGHQKAITS 79 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~v~~ 79 (85)
+.+++...++.|..+|.. ++.. .+.. .....+..+.+.+++...++...++.|..++.. ++.. ..+......+..
T Consensus 74 ~l~v~~~~~~~v~~~d~~-g~~~-~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~ 150 (300)
T 2qc5_A 74 DIWFTENGANKIGKLSKK-GGFT-EYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAF 150 (300)
T ss_dssp CEEEEETTTTEEEEECTT-SCEE-EEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEE
T ss_pred CEEEEecCCCeEEEECCC-CCeE-EecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCcee
Confidence 334444456778888877 4442 2221 123457899999999888877767889888876 4332 112222334555
Q ss_pred EEEeC
Q psy7058 80 LAFCD 84 (85)
Q Consensus 80 ~~~~~ 84 (85)
+.+.+
T Consensus 151 i~~d~ 155 (300)
T 2qc5_A 151 ITLGS 155 (300)
T ss_dssp EEECT
T ss_pred EEECC
Confidence 55543
No 226
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=97.06 E-value=0.011 Score=33.22 Aligned_cols=62 Identities=8% Similarity=0.160 Sum_probs=45.7
Q ss_pred CcEEEeeCCCceeeeeeeccCC--CcEEEEEecCCCCEEEEEc-------------------CCCeEEEEEcCCcccccc
Q psy7058 11 QTARIWNTEDFSLVRELGTANQ--RWVWDAAFTLDSKFLLTAS-------------------SDGVARLWNIETGEVDKE 69 (85)
Q Consensus 11 ~~i~~~d~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-------------------~~~~i~~~~~~~~~~~~~ 69 (85)
+.+.+.|..+.+...++..... ..-..+-|+|+++.+++.. ....|.+||+.+++...+
T Consensus 164 g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~t 243 (462)
T 2ece_A 164 GGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHS 243 (462)
T ss_dssp CEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEE
T ss_pred CeEEEEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeE
Confidence 6799999999998888764211 1123577899999888774 367999999988776666
Q ss_pred ccc
Q psy7058 70 YSG 72 (85)
Q Consensus 70 ~~~ 72 (85)
+..
T Consensus 244 I~v 246 (462)
T 2ece_A 244 LTL 246 (462)
T ss_dssp EES
T ss_pred Eec
Confidence 653
No 227
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.04 E-value=0.0094 Score=31.14 Aligned_cols=82 Identities=11% Similarity=0.106 Sum_probs=56.3
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccC-C---CcEEEEEecCCCCEEEEEcCCCeEEEEEcCCcccccccccc----
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTAN-Q---RWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGH---- 73 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~---- 73 (85)
+.|+.+..++.|.++|..+.+....+.... . ..++-+.|. +|...+..-.+..|.+.|..+++.+..+...
T Consensus 146 ~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~ 224 (268)
T 3nok_A 146 GKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYANIWHSSDVLEIDPATGTVVGVIDASALTR 224 (268)
T ss_dssp TEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTCSEEEEECTTTCBEEEEEECHHHHH
T ss_pred CEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEEECCCCeEEEEeCCCCcEEEEEECCCCcc
Confidence 456666668889999999888877765421 1 235667776 7766666656789999999998876654421
Q ss_pred ---------ccceeEEEEeC
Q psy7058 74 ---------QKAITSLAFCD 84 (85)
Q Consensus 74 ---------~~~v~~~~~~~ 84 (85)
.+-.+.++|+|
T Consensus 225 ~~~~~~~~~~~vlNGIA~dp 244 (268)
T 3nok_A 225 AVAGQVTNPEAVLNGIAVEP 244 (268)
T ss_dssp HHTTTCCCTTCCEEEEEECT
T ss_pred cccccccCcCCceEEEEEcC
Confidence 13457788876
No 228
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.04 E-value=0.0088 Score=30.78 Aligned_cols=82 Identities=10% Similarity=0.098 Sum_probs=55.2
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccCC----CcEEEEEecCCCCEEEEEcCCCeEEEEEcCCcccccccccc----
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTANQ----RWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGH---- 73 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~---- 73 (85)
+.|+.+..++.|.++|..+.+...++..... ..++-+.+. +|...+..-.+..|.+.|..+++.+..+...
T Consensus 115 ~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~ 193 (243)
T 3mbr_X 115 SHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLANVWLTSRIARIDPASGKVVAWIDLQALVP 193 (243)
T ss_dssp SCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTTTEEEEECTTTCBEEEEEECGGGST
T ss_pred CEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEEEEECCCCeEEEEECCCCCEEEEEECCcCcc
Confidence 4455566678899999998888777654211 235666665 6766666656779999999998876554411
Q ss_pred ---------ccceeEEEEeC
Q psy7058 74 ---------QKAITSLAFCD 84 (85)
Q Consensus 74 ---------~~~v~~~~~~~ 84 (85)
.+-.+.++|+|
T Consensus 194 ~~~~~~~~~~~vlNGIA~d~ 213 (243)
T 3mbr_X 194 DADALTDSTNDVLNGIAFDA 213 (243)
T ss_dssp TTTSCCCTTSSCEEEEEEET
T ss_pred ccccccCCcCCceEEEEEcC
Confidence 12447788876
No 229
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.00 E-value=0.011 Score=31.46 Aligned_cols=69 Identities=12% Similarity=0.111 Sum_probs=45.8
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccC--------CCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCcccccccc
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTAN--------QRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYS 71 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 71 (85)
+.+..++.++.+..+|..+++..-+..... ...+... ...++..++.++.++.+..+|..+++.+....
T Consensus 54 ~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~ 130 (376)
T 3q7m_A 54 NVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGG-VTVSGGHVYIGSEKAQVYALNTSDGTVAWQTK 130 (376)
T ss_dssp TEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEE-EEEETTEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred CEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccC-ceEeCCEEEEEcCCCEEEEEECCCCCEEEEEe
Confidence 467778888999999999888765554311 1222221 11245566677788999999998887665443
No 230
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=96.99 E-value=0.011 Score=30.85 Aligned_cols=65 Identities=11% Similarity=0.087 Sum_probs=46.1
Q ss_pred eEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCcccccccc
Q psy7058 4 LATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYS 71 (85)
Q Consensus 4 l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 71 (85)
+++.-.++.+.++|..+.+...++... ... ...+++++..++.+..++.+.++|..+.+....+.
T Consensus 79 yv~t~~~~~v~viD~~t~~v~~~i~~g-~~~--g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~ 143 (266)
T 2iwa_A 79 YQVVWLKNIGFIYDRRTLSNIKNFTHQ-MKD--GWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHN 143 (266)
T ss_dssp EEEETTCSEEEEEETTTTEEEEEEECC-SSS--CCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEE
T ss_pred EEEEecCCEEEEEECCCCcEEEEEECC-CCC--eEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEE
Confidence 345556789999999999988887653 111 13345577777666678899999998877666555
No 231
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=96.97 E-value=0.012 Score=31.03 Aligned_cols=77 Identities=10% Similarity=-0.144 Sum_probs=48.1
Q ss_pred eeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCcccccccc----cccccee
Q psy7058 3 LLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYS----GHQKAIT 78 (85)
Q Consensus 3 ~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~----~~~~~v~ 78 (85)
++++...++.|..||..+++.. .+. ....+.++.+++++.++++. . ..|.+||..+++...... .....++
T Consensus 63 l~~~d~~~~~i~~~d~~~~~~~-~~~--~~~~v~~i~~~~dg~l~v~~-~-~gl~~~d~~~g~~~~~~~~~~~~~~~~~~ 137 (326)
T 2ghs_A 63 AWWFNILERELHELHLASGRKT-VHA--LPFMGSALAKISDSKQLIAS-D-DGLFLRDTATGVLTLHAELESDLPGNRSN 137 (326)
T ss_dssp EEEEEGGGTEEEEEETTTTEEE-EEE--CSSCEEEEEEEETTEEEEEE-T-TEEEEEETTTCCEEEEECSSTTCTTEEEE
T ss_pred EEEEECCCCEEEEEECCCCcEE-EEE--CCCcceEEEEeCCCeEEEEE-C-CCEEEEECCCCcEEEEeeCCCCCCCCCCC
Confidence 4556666788999998776543 222 23468899999999877764 3 358889987665321111 0123466
Q ss_pred EEEEeC
Q psy7058 79 SLAFCD 84 (85)
Q Consensus 79 ~~~~~~ 84 (85)
.+.++|
T Consensus 138 ~i~~d~ 143 (326)
T 2ghs_A 138 DGRMHP 143 (326)
T ss_dssp EEEECT
T ss_pred CEEECC
Confidence 676665
No 232
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=96.96 E-value=0.012 Score=31.15 Aligned_cols=59 Identities=17% Similarity=0.187 Sum_probs=39.7
Q ss_pred CCcEEEeeCCCceeeeeeecc-----CCCcEEEEEecCCC-CEEEEEc---CCCeEEEEEcCCccccc
Q psy7058 10 DQTARIWNTEDFSLVRELGTA-----NQRWVWDAAFTLDS-KFLLTAS---SDGVARLWNIETGEVDK 68 (85)
Q Consensus 10 ~~~i~~~d~~~~~~~~~~~~~-----~~~~~~~~~~~~~~-~~~~~~~---~~~~i~~~~~~~~~~~~ 68 (85)
+..|.+||..+++....+... .....+.+.+++++ ...++-. .++.|.+||..+++...
T Consensus 92 ~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r 159 (343)
T 2qe8_A 92 VPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAAR 159 (343)
T ss_dssp CCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEE
T ss_pred CCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEE
Confidence 468999999888866655431 12346889999754 4445544 57899999987665443
No 233
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=96.81 E-value=0.014 Score=30.27 Aligned_cols=66 Identities=18% Similarity=0.122 Sum_probs=41.8
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCcccccccc
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYS 71 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 71 (85)
+.+..++.++.+..+|.. ++....... ....+..+...+++. +..++.++.+..+|.. ++....+.
T Consensus 108 ~~l~v~t~~~~l~~~d~~-g~~~~~~~~-~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~ 173 (330)
T 3hxj_A 108 DILYVTSMDGHLYAINTD-GTEKWRFKT-KKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFK 173 (330)
T ss_dssp TEEEEECTTSEEEEECTT-SCEEEEEEC-SSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEEE
T ss_pred CEEEEEecCCEEEEEcCC-CCEEEEEcC-CCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEe
Confidence 456677778889999987 665555443 223344555565666 4456677888888887 65544433
No 234
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=96.79 E-value=0.016 Score=30.08 Aligned_cols=57 Identities=9% Similarity=0.079 Sum_probs=40.4
Q ss_pred eeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcC
Q psy7058 3 LLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIE 62 (85)
Q Consensus 3 ~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 62 (85)
++++...++.|..|+. +++. ..+.. ....+..+.++++|.++++...++.|..|+..
T Consensus 59 l~~~d~~~~~i~~~~~-~g~~-~~~~~-~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~ 115 (305)
T 3dr2_A 59 LVWSDLVGRRVLGWRE-DGTV-DVLLD-ATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD 115 (305)
T ss_dssp EEEEETTTTEEEEEET-TSCE-EEEEE-SCSCEEEEEECTTSCEEEEETTTTEEEEECTT
T ss_pred EEEEECCCCEEEEEeC-CCCE-EEEeC-CCCccceeeECCCCCEEEEECCCCEEEEECCC
Confidence 4566777788999987 4442 33332 34558899999999977766666789989875
No 235
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=96.74 E-value=0.018 Score=29.68 Aligned_cols=64 Identities=11% Similarity=0.164 Sum_probs=46.3
Q ss_pred eEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCcccccccc
Q psy7058 4 LATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYS 71 (85)
Q Consensus 4 l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 71 (85)
+...-.++.+.++|..+.+...++.....+ +.++ +++..+.....++.|.++|..+.+.+..+.
T Consensus 78 y~ltw~~~~v~v~D~~tl~~~~ti~~~~~G--wglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~ 141 (243)
T 3mbr_X 78 IQLTWRNHEGFVYDLATLTPRARFRYPGEG--WALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIK 141 (243)
T ss_dssp EEEESSSSEEEEEETTTTEEEEEEECSSCC--CEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEE
T ss_pred EEEEeeCCEEEEEECCcCcEEEEEeCCCCc--eEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEE
Confidence 344557889999999999999888763322 3444 466666666678899999998877666555
No 236
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=96.64 E-value=0.023 Score=29.66 Aligned_cols=67 Identities=10% Similarity=0.156 Sum_probs=42.8
Q ss_pred eeEEeeCCC--cEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEE-EEcCCCeEEEEEcCCcccccccc
Q psy7058 3 LLATTSADQ--TARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL-TASSDGVARLWNIETGEVDKEYS 71 (85)
Q Consensus 3 ~l~~~~~~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~ 71 (85)
++.+.+.++ .|+.+|+.+++...++.......-..+.. ++..+. ..-.++.+.++|..+.+.+.++.
T Consensus 55 LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~--~g~~ly~ltw~~~~v~v~D~~t~~~~~ti~ 124 (262)
T 3nol_A 55 FYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISD--WKDKIVGLTWKNGLGFVWNIRNLRQVRSFN 124 (262)
T ss_dssp EEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEE--ETTEEEEEESSSSEEEEEETTTCCEEEEEE
T ss_pred EEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEE--eCCEEEEEEeeCCEEEEEECccCcEEEEEE
Confidence 455666655 89999999999888776522211223333 343433 33457788888988877766665
No 237
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=96.59 E-value=0.0054 Score=35.66 Aligned_cols=62 Identities=6% Similarity=0.181 Sum_probs=45.4
Q ss_pred CCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccc
Q psy7058 9 ADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSG 72 (85)
Q Consensus 9 ~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 72 (85)
.++.|..||..+++..-+..... +.....+...+..++.++.++.++.||.++++.+..+..
T Consensus 436 ~~g~l~A~D~~tG~~~W~~~~~~--~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~ 497 (668)
T 1kv9_A 436 VSGALLAWDPVKQKAAWKVPYPT--HWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEA 497 (668)
T ss_dssp CEEEEEEEETTTTEEEEEEEESS--SCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred ccceEEEEeCCCCcEEEEccCCC--CCcCceeEeCCCEEEEECCcccchhhhhhcChhheEecC
Confidence 34789999999998876665422 122223344677888889999999999999988876653
No 238
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=96.55 E-value=0.045 Score=31.95 Aligned_cols=53 Identities=15% Similarity=0.117 Sum_probs=33.7
Q ss_pred cEEEeeCCCceee--eeeecc--CCCcEEEEEecCCCCEEEEEc----CCCeEEEEEcCCc
Q psy7058 12 TARIWNTEDFSLV--RELGTA--NQRWVWDAAFTLDSKFLLTAS----SDGVARLWNIETG 64 (85)
Q Consensus 12 ~i~~~d~~~~~~~--~~~~~~--~~~~~~~~~~~~~~~~~~~~~----~~~~i~~~~~~~~ 64 (85)
.|++|++.+.... ...... +......+.++|||++++... ....++++++..+
T Consensus 209 ~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~ 269 (693)
T 3iuj_A 209 KVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQE 269 (693)
T ss_dssp EEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTST
T ss_pred EEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCC
Confidence 4889998765432 222211 123467889999999875433 2358999998765
No 239
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=96.54 E-value=0.0086 Score=34.99 Aligned_cols=48 Identities=15% Similarity=0.107 Sum_probs=34.6
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEE
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 48 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 48 (85)
|.+++.++.|+.++.||..+++.+.++..........+.+..+|+..+
T Consensus 486 gglvf~gt~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~ty~~~G~qyv 533 (689)
T 1yiq_A 486 GNLVFEGSADGRVIAYAADTGEKLWEQPAASGVMAAPVTYSVDGEQYV 533 (689)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEE
T ss_pred CCEEEEECCCCcEEEEECCCCccceeeeCCCCcccCceEEEECCEEEE
Confidence 467888999999999999999998887753332223455566776543
No 240
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=96.53 E-value=0.017 Score=30.01 Aligned_cols=61 Identities=15% Similarity=0.037 Sum_probs=37.0
Q ss_pred eeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCcccccc
Q psy7058 3 LLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKE 69 (85)
Q Consensus 3 ~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 69 (85)
.+..++.++.+..+|.. ++....... ....+..+...+++...+.. +.+..+| .+++....
T Consensus 149 ~l~vgt~~~~l~~~d~~-g~~~~~~~~-~~~~~~~~~~d~~g~l~v~t---~~l~~~d-~~g~~~~~ 209 (330)
T 3hxj_A 149 TIYVGSNDNYLYAINPD-GTEKWRFKT-NDAITSAASIGKDGTIYFGS---DKVYAIN-PDGTEKWN 209 (330)
T ss_dssp CEEEECTTSEEEEECTT-SCEEEEEEC-SSCCCSCCEECTTCCEEEES---SSEEEEC-TTSCEEEE
T ss_pred EEEEEcCCCEEEEECCC-CCEeEEEec-CCCceeeeEEcCCCEEEEEe---CEEEEEC-CCCcEEEE
Confidence 45667777889999987 666555443 23334555566666654433 6777777 55544433
No 241
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=96.48 E-value=0.022 Score=33.26 Aligned_cols=48 Identities=10% Similarity=0.065 Sum_probs=34.7
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEE
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 48 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 48 (85)
+++++.++.|+.+++||..+++.+.++..........+.+..+|+.++
T Consensus 488 g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~y~~~G~~~v 535 (677)
T 1kb0_A 488 GNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAPSTYMVDGRQYV 535 (677)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEE
T ss_pred CCEEEEECCCCcEEEEECCCCceeeeeeCCCCcccCCEEEEeCCEEEE
Confidence 356788899999999999999999888754433333455556776544
No 242
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=96.37 E-value=0.045 Score=29.98 Aligned_cols=61 Identities=8% Similarity=-0.027 Sum_probs=39.8
Q ss_pred eeEEeeCCCcEEEeeCCCceeeeeeeccC--------------CCcEEEEEecCCCCEEEEEc-CCCeEEEEEcCCcc
Q psy7058 3 LLATTSADQTARIWNTEDFSLVRELGTAN--------------QRWVWDAAFTLDSKFLLTAS-SDGVARLWNIETGE 65 (85)
Q Consensus 3 ~l~~~~~~~~i~~~d~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~ 65 (85)
++++...++.|+.|+.... . ..+.... -.....++++++|.++++-. .++.|+.|+..++.
T Consensus 281 lyv~d~~~~~I~~~~~~g~-~-~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~ 356 (409)
T 3hrp_A 281 FYMSDQNLSSVYKITPDGE-C-EWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGY 356 (409)
T ss_dssp EEEEETTTTEEEEECTTCC-E-EEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTE
T ss_pred EEEEeCCCCEEEEEecCCC-E-EEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCE
Confidence 4455556677888876532 1 1111100 12368899999999777777 78899999976664
No 243
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=96.35 E-value=0.037 Score=28.77 Aligned_cols=80 Identities=10% Similarity=0.004 Sum_probs=42.2
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeec---cCCCcEEEEEecCCCCEEEE----EcC-------------CCeEEEEEc
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGT---ANQRWVWDAAFTLDSKFLLT----ASS-------------DGVARLWNI 61 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~----~~~-------------~~~i~~~~~ 61 (85)
+++++...++.|..|+.. ++....... .....++.+.+.++|.+.++ +.. .+.|..++.
T Consensus 98 ~l~v~~~~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~ 176 (305)
T 3dr2_A 98 RLVHCEHGRRAITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPP 176 (305)
T ss_dssp CEEEEETTTTEEEEECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECS
T ss_pred CEEEEECCCCEEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcC
Confidence 333443344678888865 443221111 01123567999999998876 321 245777776
Q ss_pred CCccccccccccccceeEEEEeC
Q psy7058 62 ETGEVDKEYSGHQKAITSLAFCD 84 (85)
Q Consensus 62 ~~~~~~~~~~~~~~~v~~~~~~~ 84 (85)
.+++..... .....+.++|+|
T Consensus 177 ~~g~~~~~~--~~~~p~gl~~sp 197 (305)
T 3dr2_A 177 DGSPLQRMA--DLDHPNGLAFSP 197 (305)
T ss_dssp SSCCCEEEE--EESSEEEEEECT
T ss_pred CCCcEEEEe--cCCCCcceEEcC
Confidence 555432221 223445566665
No 244
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=96.25 E-value=0.0084 Score=34.40 Aligned_cols=61 Identities=13% Similarity=0.249 Sum_probs=42.9
Q ss_pred CCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccc
Q psy7058 10 DQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSG 72 (85)
Q Consensus 10 ~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 72 (85)
++.|..||+.+++..-+...... ...-.+...+..++.++.|+.++.+|.++++.+..++.
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~~~~--~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~~ 525 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKEHLP--LWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQT 525 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEESSC--CCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred cceEEEEECCCCCEEEEecCCCC--CcccceEeCCCEEEEECCCCcEEEEECCCCCEEEEecC
Confidence 57899999999988766554211 11111122466777789999999999999998877763
No 245
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=96.21 E-value=0.011 Score=33.85 Aligned_cols=61 Identities=10% Similarity=0.089 Sum_probs=42.8
Q ss_pred CCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCcccccccc
Q psy7058 9 ADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYS 71 (85)
Q Consensus 9 ~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 71 (85)
.++.+..||..+++..-+...... +....+...+..++.++.++.++.+|.++++.+..+.
T Consensus 442 ~~g~l~a~D~~tG~~~W~~~~~~~--~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~ 502 (571)
T 2ad6_A 442 EMGQIRAFDLTTGKAKWTKWEKFA--AWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFK 502 (571)
T ss_dssp CCEEEEEECTTTCCEEEEEEESSC--CCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred CCCeEEEEECCCCCEEEEecCCCC--ccceeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEe
Confidence 457899999999988766654221 1111122245667778899999999999999887765
No 246
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=96.09 E-value=0.078 Score=29.97 Aligned_cols=68 Identities=10% Similarity=0.098 Sum_probs=44.7
Q ss_pred eeEEeeCCCcEEEeeCCCc----eeeeeeec-----c-CCCcEEEEEecCCCCEEEEEcCC------CeEEEEEcCCccc
Q psy7058 3 LLATTSADQTARIWNTEDF----SLVRELGT-----A-NQRWVWDAAFTLDSKFLLTASSD------GVARLWNIETGEV 66 (85)
Q Consensus 3 ~l~~~~~~~~i~~~d~~~~----~~~~~~~~-----~-~~~~~~~~~~~~~~~~~~~~~~~------~~i~~~~~~~~~~ 66 (85)
+++++..+..|+++|+.+. +....+.. . ....-..+...|+| ..++...+ +.+.++|..+.+.
T Consensus 98 l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v 176 (462)
T 2ece_A 98 LIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHYSFEP 176 (462)
T ss_dssp EEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTTTCCE
T ss_pred EEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCCeE
Confidence 3567778889999998644 44444420 0 11134567778999 55554333 6899999998887
Q ss_pred ccccc
Q psy7058 67 DKEYS 71 (85)
Q Consensus 67 ~~~~~ 71 (85)
+..+.
T Consensus 177 ~~~~~ 181 (462)
T 2ece_A 177 LGKWE 181 (462)
T ss_dssp EEECC
T ss_pred EEEEc
Confidence 77665
No 247
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=95.93 E-value=0.035 Score=32.83 Aligned_cols=51 Identities=10% Similarity=-0.035 Sum_probs=31.5
Q ss_pred cEEEeeCCCc-eeeeeeeccCCCcEEEEEecCCCCEEEEEcCC-----CeEEEEEcCCcc
Q psy7058 12 TARIWNTEDF-SLVRELGTANQRWVWDAAFTLDSKFLLTASSD-----GVARLWNIETGE 65 (85)
Q Consensus 12 ~i~~~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~i~~~~~~~~~ 65 (85)
.|+++|+.++ +.+.... ......+.|+||++.++....+ ..|+.+++.++.
T Consensus 202 ~l~v~dl~~g~~~l~~~~---~~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~ 258 (751)
T 2xe4_A 202 TIEFKRISDPSQTIADKV---SGTNGEIVWGPDHTSLFYVTKDETLRENKVWRHVMGKLQ 258 (751)
T ss_dssp EEEEEETTCTTCCCCCCE---EEECSCCEECSSTTEEEEEEECTTCCEEEEEEEETTSCG
T ss_pred EEEEEECCCCCEeCCccc---cCceeeEEEecCCCEEEEEEECCCCCCCEEEEEECCCCc
Confidence 4899999887 5321100 1112357899999877765543 257777776554
No 248
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=95.74 E-value=0.08 Score=28.09 Aligned_cols=55 Identities=9% Similarity=0.071 Sum_probs=35.0
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCe
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGV 55 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 55 (85)
|+.+++...++.|.+||..+++...............+++.+++.++++....+.
T Consensus 259 G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g~l~v~~~~~~~ 313 (343)
T 2qe8_A 259 HNIYVGDLAHSAIGVITSADRAYKLLVTDEKLSWTDSFNFGSDGYLYFDCNQLHH 313 (343)
T ss_dssp CCEEEEEGGGTEEEEEETTTTEEEEEEECGGGSCEEEEEECTTSCEEEEECCGGG
T ss_pred CCEEEEccCCCeEEEEECCCCCEEEEEECCceecCCeeEECCCCcEEEEeCcccc
Confidence 3456666677889999984565433322212345788999988887777654433
No 249
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=95.65 E-value=0.069 Score=30.68 Aligned_cols=68 Identities=13% Similarity=0.174 Sum_probs=42.9
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccCC---CcEEE-EEecCCCCEEEEEcC------CCeEEEEEcCCcccccccc
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTANQ---RWVWD-AAFTLDSKFLLTASS------DGVARLWNIETGEVDKEYS 71 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~---~~~~~-~~~~~~~~~~~~~~~------~~~i~~~~~~~~~~~~~~~ 71 (85)
..++.++.++.+..+|..+++..-+...... ..+.. ..+. ++ .++.+.. ++.|..+|..+++.+..+.
T Consensus 116 ~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~-~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 193 (571)
T 2ad6_A 116 GQIVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVA-KD-TVLMGCSGAELGVRGAVNAFDLKTGELKWRAF 193 (571)
T ss_dssp TEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEE-TT-EEEEECBCGGGTCCCEEEEEETTTCCEEEEEE
T ss_pred CEEEEEeCCCEEEEEECCCCCEEEEecCCCCCccceeccCCEEE-CC-EEEEEecCCccCCCCEEEEEECCCCcEEEEEc
Confidence 4577788899999999999988766543110 01110 0011 34 4444443 7899999999988766544
No 250
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=95.56 E-value=0.061 Score=31.46 Aligned_cols=70 Identities=7% Similarity=0.062 Sum_probs=43.0
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecC--CCCEEEEEcC------CCeEEEEEcCCcccccccc
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTL--DSKFLLTASS------DGVARLWNIETGEVDKEYS 71 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~------~~~i~~~~~~~~~~~~~~~ 71 (85)
..++.++.|+.+..+|..+++..-+...........+.-+| .+..++.+.. ++.|..+|..+++.+..+.
T Consensus 118 ~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 195 (668)
T 1kv9_A 118 DKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFY 195 (668)
T ss_dssp TEEEEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred CEEEEEcCCCEEEEEECCCCCEeeeeccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEec
Confidence 45778888999999999999887666542110000000111 1234444432 5889999999988776554
No 251
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=95.54 E-value=0.034 Score=32.23 Aligned_cols=61 Identities=13% Similarity=0.204 Sum_probs=42.5
Q ss_pred CCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCcccccccc
Q psy7058 9 ADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYS 71 (85)
Q Consensus 9 ~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 71 (85)
..+.+..||+.+++..-+...... ...-.+...+..++.++.|+.++.+|.++++.+.+++
T Consensus 451 ~~G~l~A~D~~tG~~~W~~~~~~~--~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~lW~~~ 511 (599)
T 1w6s_A 451 GLGQIKAYNAITGDYKWEKMERFA--VWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKFK 511 (599)
T ss_dssp CCEEEEEECTTTCCEEEEEEESSC--CCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred CcCeEEEEECCCCCEEeEecCCCC--ccCcceEecCCEEEEECCCCeEEEEECCCCCEEEEee
Confidence 357899999999988766643211 1111112246677778999999999999999887765
No 252
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=95.37 E-value=0.048 Score=33.29 Aligned_cols=36 Identities=14% Similarity=0.123 Sum_probs=29.8
Q ss_pred cEEEEEecCCCCEEEEEcCCCeEEEEEcCCcccccc
Q psy7058 34 WVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKE 69 (85)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 69 (85)
.+.++...++..++++.+.|+++|+|++.+++++.+
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t 272 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVET 272 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEee
Confidence 456677777888999999999999999998876554
No 253
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=95.33 E-value=0.068 Score=30.83 Aligned_cols=47 Identities=11% Similarity=0.034 Sum_probs=32.5
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEE
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFL 47 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 47 (85)
|.+++.++.|+.++.+|..+++.+-++.........-+.+..+|+..
T Consensus 497 gglvf~g~~dg~l~A~D~~tG~~lW~~~~~~g~~a~P~~y~~~G~qY 543 (582)
T 1flg_A 497 GNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGEQY 543 (582)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEE
T ss_pred CCEEEEECCCCcEEEEECCCCCEEEEecCCCCcccCceEEEECCEEE
Confidence 35778899999999999999999888775332212224444567643
No 254
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=95.19 E-value=0.14 Score=26.59 Aligned_cols=61 Identities=13% Similarity=0.139 Sum_probs=44.4
Q ss_pred eeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCc
Q psy7058 3 LLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETG 64 (85)
Q Consensus 3 ~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 64 (85)
++++...++.|...|.. ++....+..........+++.+++.++++.-.++.+.++++...
T Consensus 41 L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~ 101 (255)
T 3qqz_A 41 LFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTPN 101 (255)
T ss_dssp EEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEECTT
T ss_pred EEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcCCC
Confidence 44557778888888987 77777765423345788888888887777667788888887543
No 255
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=94.43 E-value=0.16 Score=29.53 Aligned_cols=46 Identities=9% Similarity=0.058 Sum_probs=31.5
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCE
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKF 46 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 46 (85)
|.+++.++.|+.++.+|..+++.+-+..........-+.+..+|+.
T Consensus 484 gg~vf~gt~dg~l~A~D~~tG~~lW~~~l~~g~~~~P~~y~~~G~q 529 (599)
T 1w6s_A 484 GDLVFYGTLDGYLKARDSDTGDLLWKFKIPSGAIGYPMTYTHKGTQ 529 (599)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEE
T ss_pred CCEEEEECCCCeEEEEECCCCCEEEEeeCCCCcEeccEEEEeCCEE
Confidence 3567789999999999999999988776532222223444456654
No 256
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=94.36 E-value=0.32 Score=26.96 Aligned_cols=59 Identities=3% Similarity=0.041 Sum_probs=35.5
Q ss_pred eEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEE-EEcCCCeEEEEEcC
Q psy7058 4 LATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL-TASSDGVARLWNIE 62 (85)
Q Consensus 4 l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~ 62 (85)
+++-..++.|..++..++................++++|++..++ +-...+.|..++..
T Consensus 241 yv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d 300 (430)
T 3tc9_A 241 YFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYD 300 (430)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred EEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCC
Confidence 334445566777777655432222221223457899999999544 44567789888764
No 257
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=94.01 E-value=0.048 Score=33.88 Aligned_cols=33 Identities=15% Similarity=0.157 Sum_probs=26.5
Q ss_pred EEEecCCCCEEEEEcCCCeEEEEEcCCcccccc
Q psy7058 37 DAAFTLDSKFLLTASSDGVARLWNIETGEVDKE 69 (85)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 69 (85)
++...++..++++.+.|+++++|++.+++++.+
T Consensus 242 s~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t 274 (1139)
T 4fhn_B 242 SMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVET 274 (1139)
T ss_dssp CCEEETTTTEEEEEBTTCEEEEEETTTTEEEEE
T ss_pred EeeccCCccEEEEEeCCCEEEEEECCCCCeEEe
Confidence 344456778999999999999999998876654
No 258
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=93.92 E-value=0.33 Score=25.35 Aligned_cols=77 Identities=9% Similarity=-0.057 Sum_probs=43.3
Q ss_pred eEEeeCCCcEEEeeCCC-cee--eeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccc--ccccccccccee
Q psy7058 4 LATTSADQTARIWNTED-FSL--VRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEV--DKEYSGHQKAIT 78 (85)
Q Consensus 4 l~~~~~~~~i~~~d~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~~~~~v~ 78 (85)
+++-...+.|..++... ++. ...+.. ......+++.++|.+.++....+.|..++.. ++. +..+........
T Consensus 182 yv~d~~~~~I~~~~~~~~g~~~~~~~~~~--~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~~~~~~~~~~p~ 258 (306)
T 2p4o_A 182 YVSNTEKMLLLRIPVDSTDKPGEPEIFVE--QTNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIAQAEQGVIGST 258 (306)
T ss_dssp EEEETTTTEEEEEEBCTTSCBCCCEEEEE--SCCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEECGGGTCTTEE
T ss_pred EEEeCCCCEEEEEEeCCCCCCCccEEEec--cCCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEEEeecccccCCce
Confidence 34444566788888753 221 111111 1123457888899877666667889999864 443 222332234566
Q ss_pred EEEEe
Q psy7058 79 SLAFC 83 (85)
Q Consensus 79 ~~~~~ 83 (85)
+++|.
T Consensus 259 ~~a~~ 263 (306)
T 2p4o_A 259 AVAFG 263 (306)
T ss_dssp EEEEC
T ss_pred EEEEe
Confidence 77775
No 259
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=93.64 E-value=0.34 Score=24.63 Aligned_cols=58 Identities=7% Similarity=-0.121 Sum_probs=33.8
Q ss_pred EEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEE-EEEcCCCeEEEEEcCC
Q psy7058 5 ATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFL-LTASSDGVARLWNIET 63 (85)
Q Consensus 5 ~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~~~~~ 63 (85)
++-..++.|..++............ .......+.+++++..+ ++-...+.|.+++...
T Consensus 52 ~~d~~~~~I~~~~~~g~~~~~~~~~-~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g 110 (267)
T 1npe_A 52 WTDISEPSIGRASLHGGEPTTIIRQ-DLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDG 110 (267)
T ss_dssp EEETTTTEEEEEESSSCCCEEEECT-TCCCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred EEECCCCEEEEEecCCCCcEEEEEC-CCCCccEEEEEecCCeEEEEECCCCEEEEEEcCC
Confidence 3344456677777654433222222 22346889999865544 4445567899888753
No 260
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=93.51 E-value=0.62 Score=27.24 Aligned_cols=63 Identities=8% Similarity=0.085 Sum_probs=36.8
Q ss_pred ceeEEeeC-CCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEc-CC-----CeEEEEEcCCc
Q psy7058 2 GLLATTSA-DQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTAS-SD-----GVARLWNIETG 64 (85)
Q Consensus 2 ~~l~~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-----~~i~~~~~~~~ 64 (85)
..++.|+. +..+.+||..+.+-...-.......-..+...++++.++.|+ .+ ..+.+||..+.
T Consensus 255 ~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~ 324 (656)
T 1k3i_A 255 QIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSK 324 (656)
T ss_dssp CEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTT
T ss_pred CEEEeCCCCCCceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCC
Confidence 45667773 457888997765332211111111123444556889888887 33 46889998654
No 261
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=93.34 E-value=0.13 Score=30.76 Aligned_cols=34 Identities=12% Similarity=0.447 Sum_probs=26.6
Q ss_pred EEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccc
Q psy7058 35 VWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEY 70 (85)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 70 (85)
|.++.+ +..++++.+.|+++|+|++.+++++.+.
T Consensus 224 Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~ 257 (729)
T 3f7f_A 224 ISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDY 257 (729)
T ss_dssp EEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred EEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEee
Confidence 444443 5779999999999999999998766543
No 262
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=93.32 E-value=0.67 Score=27.09 Aligned_cols=53 Identities=8% Similarity=0.130 Sum_probs=32.6
Q ss_pred cEEEeeCCCceee--eeeeccCCCcEEEEEecCCCCEEEEEcC-CCeEEEEEcCCc
Q psy7058 12 TARIWNTEDFSLV--RELGTANQRWVWDAAFTLDSKFLLTASS-DGVARLWNIETG 64 (85)
Q Consensus 12 ~i~~~d~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~ 64 (85)
.+.+||..+.+-. ..+..........+.+..++.+++.|+. +..+.+||..+.
T Consensus 220 ~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~ 275 (656)
T 1k3i_A 220 LTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSLYDSSSD 275 (656)
T ss_dssp EEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEEEEGGGT
T ss_pred EEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEEecCcCC
Confidence 4778888765422 2222212222334666788999988874 458999998654
No 263
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=93.13 E-value=0.28 Score=27.76 Aligned_cols=32 Identities=9% Similarity=0.205 Sum_probs=27.5
Q ss_pred CCcEEEEEecCC---CCEEEEEcCCCeEEEEEcCC
Q psy7058 32 QRWVWDAAFTLD---SKFLLTASSDGVARLWNIET 63 (85)
Q Consensus 32 ~~~~~~~~~~~~---~~~~~~~~~~~~i~~~~~~~ 63 (85)
..+|..+.|+|- +..+++...|+.|++||+..
T Consensus 124 ~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~ 158 (452)
T 3pbp_A 124 KSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILN 158 (452)
T ss_dssp CCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTC
T ss_pred CCceeEEEeccccCCCCeEEEEecCCEEEEEEccc
Confidence 457999999994 56899999999999999975
No 264
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=93.10 E-value=0.43 Score=24.24 Aligned_cols=77 Identities=6% Similarity=0.050 Sum_probs=43.4
Q ss_pred EEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccccccccccc-cceeEEEEe
Q psy7058 5 ATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQ-KAITSLAFC 83 (85)
Q Consensus 5 ~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~-~~v~~~~~~ 83 (85)
++-...+.|.++|............ . .....++.. .+..+++...++.|..++..+++.+..+.... .....+++.
T Consensus 183 v~d~~~~~I~~~~~~g~~~~~~~~~-~-~~P~gi~~d-~~~lyva~~~~~~v~~~d~~~g~~~~~i~~g~~~~p~gi~~~ 259 (267)
T 1npe_A 183 WVDAGTHRAECLNPAQPGRRKVLEG-L-QYPFAVTSY-GKNLYYTDWKTNSVIAMDLAISKEMDTFHPHKQTRLYGITIA 259 (267)
T ss_dssp EEETTTTEEEEEETTEEEEEEEEEC-C-CSEEEEEEE-TTEEEEEETTTTEEEEEETTTTEEEEEECCSSCCCCCCEEEE
T ss_pred EEECCCCEEEEEecCCCceEEEecC-C-CCceEEEEe-CCEEEEEECCCCeEEEEeCCCCCceEEEccccccccceeeec
Confidence 4444556788888764433222222 1 223455553 34444444456899999998888777665332 235566665
Q ss_pred C
Q psy7058 84 D 84 (85)
Q Consensus 84 ~ 84 (85)
|
T Consensus 260 ~ 260 (267)
T 1npe_A 260 L 260 (267)
T ss_dssp C
T ss_pred C
Confidence 5
No 265
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=92.50 E-value=1 Score=26.95 Aligned_cols=53 Identities=11% Similarity=-0.015 Sum_probs=33.2
Q ss_pred cEEEeeCCCceee--eeeeccCCCcEEEEEecCCCCEEEEEcC---CCeEEEEEcCCc
Q psy7058 12 TARIWNTEDFSLV--RELGTANQRWVWDAAFTLDSKFLLTASS---DGVARLWNIETG 64 (85)
Q Consensus 12 ~i~~~d~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~i~~~~~~~~ 64 (85)
.|+.+++.++... ..+..........+.|+|||++++.... ...++++|+..+
T Consensus 248 ~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~ 305 (751)
T 2xe4_A 248 KVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKG 305 (751)
T ss_dssp EEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSC
T ss_pred EEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCC
Confidence 5777887765422 2222212334567899999998776542 346888888764
No 266
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=92.49 E-value=0.96 Score=26.67 Aligned_cols=61 Identities=20% Similarity=0.159 Sum_probs=41.9
Q ss_pred Ccee-EEeeCCCcEEEeeCCCce------------eeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCC
Q psy7058 1 MGLL-ATTSADQTARIWNTEDFS------------LVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIET 63 (85)
Q Consensus 1 g~~l-~~~~~~~~i~~~d~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 63 (85)
|+++ +++..+..+.++|+.+.+ ....+. -...-..+.|+++|....+.-.++.|..|++..
T Consensus 288 Gk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~--vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 288 KKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPE--LGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp SSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCB--CCSCEEEEEECTTSEEEEEETTTTEEEEEEHHH
T ss_pred CCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcC--CCCCcceEEECCCCeEEEEEecCCcEEEEEhhH
Confidence 3444 455577889999998653 223332 233478899999994445666789999999876
No 267
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=92.47 E-value=0.78 Score=25.57 Aligned_cols=59 Identities=5% Similarity=-0.035 Sum_probs=34.7
Q ss_pred eEEeeCCCcEEEeeCCCceeeeee-eccCCCcEEEEEecCCCCEEE-EEcCCCeEEEEEcC
Q psy7058 4 LATTSADQTARIWNTEDFSLVREL-GTANQRWVWDAAFTLDSKFLL-TASSDGVARLWNIE 62 (85)
Q Consensus 4 l~~~~~~~~i~~~d~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~ 62 (85)
+++-..++.|+.+|..++.....+ ..........++++|++..+. +-...+.|+.++..
T Consensus 243 yv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d 303 (433)
T 4hw6_A 243 YYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYN 303 (433)
T ss_dssp EECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBC
T ss_pred EEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCC
Confidence 334445566777777655542222 111122234699999998554 44556789988764
No 268
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=92.27 E-value=0.34 Score=29.13 Aligned_cols=28 Identities=18% Similarity=0.501 Sum_probs=23.7
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeec
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGT 29 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~ 29 (85)
.++++-+.|+++++|++.+++.+....-
T Consensus 232 ~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 232 RYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp TEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred cEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 4788999999999999999987766543
No 269
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=92.21 E-value=0.77 Score=24.97 Aligned_cols=64 Identities=13% Similarity=0.147 Sum_probs=39.5
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEe--cC-CCCEEEEE-cCCCeEEEEEcCCcc
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAF--TL-DSKFLLTA-SSDGVARLWNIETGE 65 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~-~~~~~i~~~~~~~~~ 65 (85)
+.++.++.|+.|+-+|..+|+..-++......++....- .+ ++..++.. ..||.+..++..++.
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~ 78 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGL 78 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEE
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCc
Confidence 468899999999999999998887776531111221110 01 22223232 478888888876664
No 270
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=91.65 E-value=1.3 Score=26.22 Aligned_cols=70 Identities=11% Similarity=0.008 Sum_probs=47.3
Q ss_pred ceeEEee-CCCcEEEeeCCCceeeeeeeccCCCcEEEEEe-c-CCCCEEEEEc------------------CCCeEEEEE
Q psy7058 2 GLLATTS-ADQTARIWNTEDFSLVRELGTANQRWVWDAAF-T-LDSKFLLTAS------------------SDGVARLWN 60 (85)
Q Consensus 2 ~~l~~~~-~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~------------------~~~~i~~~~ 60 (85)
+++.... .+..|.+.|+.+.+....+..........+.+ + |++.+++.++ .++.+.+.|
T Consensus 102 ~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID 181 (595)
T 1fwx_A 102 RFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVD 181 (595)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEE
T ss_pred CEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEE
Confidence 4454444 45679999999998877443323334677777 4 8898887774 235788888
Q ss_pred cCCcccccccc
Q psy7058 61 IETGEVDKEYS 71 (85)
Q Consensus 61 ~~~~~~~~~~~ 71 (85)
..+.+...++.
T Consensus 182 ~~t~~v~~qI~ 192 (595)
T 1fwx_A 182 ADKWEVAWQVL 192 (595)
T ss_dssp TTTTEEEEEEE
T ss_pred CCCCeEEEEEE
Confidence 88777666554
No 271
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=91.50 E-value=1.8 Score=27.63 Aligned_cols=64 Identities=14% Similarity=-0.062 Sum_probs=39.4
Q ss_pred eeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCC------CCEEEEEcC-CCeEEEEEcCCcccc
Q psy7058 3 LLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLD------SKFLLTASS-DGVARLWNIETGEVD 67 (85)
Q Consensus 3 ~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~-~~~i~~~~~~~~~~~ 67 (85)
+++.+. ++.+.++.+..++............+.++.+.+. +.+++.|.. |++++|++++..+.+
T Consensus 525 ~vvva~-g~~l~~fel~~~~L~~~~~~~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~ 595 (1158)
T 3ei3_A 525 QVVVAV-GRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELL 595 (1158)
T ss_dssp EEEEEE-TTEEEEEEEETTEEEEEEEEECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEE
T ss_pred EEEEEE-CCEEEEEEeeCCceeeecccCCCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeE
Confidence 344443 4566666655443222111123456899998763 468888886 999999999865443
No 272
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=91.16 E-value=0.43 Score=29.92 Aligned_cols=27 Identities=15% Similarity=0.185 Sum_probs=22.8
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeee
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELG 28 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~ 28 (85)
.++++-+.|+++++|++.+++++....
T Consensus 250 ~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 250 NVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp TEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred cEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 467899999999999999998877653
No 273
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=91.08 E-value=0.47 Score=29.28 Aligned_cols=27 Identities=15% Similarity=0.185 Sum_probs=22.8
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeee
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELG 28 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~ 28 (85)
.++++-+.|+++++|++.+++++....
T Consensus 248 ~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 248 NVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp TEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred cEEEEEECCCEEEEEECCCCCeEeeec
Confidence 367899999999999999998877653
No 274
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=89.41 E-value=1.7 Score=24.06 Aligned_cols=61 Identities=7% Similarity=-0.025 Sum_probs=43.5
Q ss_pred eEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCcc
Q psy7058 4 LATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGE 65 (85)
Q Consensus 4 l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 65 (85)
+..-..-|.+++||+.++.++..-+. ...++...+......-++.....|.+.-..+.+.+
T Consensus 274 iyviTK~G~ihlyDleTgt~i~~nrI-S~d~iF~ta~~~~~~Gi~~Vnr~GqVl~v~v~~~~ 334 (365)
T 2xzh_A 274 VFLITKYGYIHLYDLETGTCIYMNRI-SGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEEN 334 (365)
T ss_dssp EEEEETTSEEEEEETTTCCEEEEEEC-CSSCEEEEEEEGGGTEEEEEETTCEEEEEEECTTT
T ss_pred EEEEeCCcEEEEEEcccCcEEEEecc-CCCceEEecccCCCCcEEEEcCCCEEEEEEECccc
Confidence 45556778999999999999988776 44556555555555566666788887777776554
No 275
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=88.91 E-value=0.58 Score=25.43 Aligned_cols=64 Identities=13% Similarity=0.072 Sum_probs=40.1
Q ss_pred eCCCcEEEeeCCCceeeeeeecc---CCCcEEEE---Ee-----cCCCCEEEEEcCCCeEEEEEcCCcccccccc
Q psy7058 8 SADQTARIWNTEDFSLVRELGTA---NQRWVWDA---AF-----TLDSKFLLTASSDGVARLWNIETGEVDKEYS 71 (85)
Q Consensus 8 ~~~~~i~~~d~~~~~~~~~~~~~---~~~~~~~~---~~-----~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 71 (85)
..||.++.++..++.....+... ...++..- .+ ...+..+++++.++.+.-.|+.+|+.+..+.
T Consensus 64 ~~dG~l~a~~~~~G~~~~~~~~~~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~ 138 (339)
T 2be1_A 64 FGDGNIYYFNAHQGLQKLPLSIRQLVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFG 138 (339)
T ss_dssp STTTEEEEEETTTEEEEEEEEHHHHHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEES
T ss_pred CCCCEEEEEECCCCcEEeeeccccceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEe
Confidence 57999999998887544333221 11122210 00 0134567788899999999999998777665
No 276
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=88.83 E-value=1.2 Score=26.56 Aligned_cols=54 Identities=7% Similarity=-0.079 Sum_probs=25.7
Q ss_pred eCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcC--CCeEEEEEcC
Q psy7058 8 SADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASS--DGVARLWNIE 62 (85)
Q Consensus 8 ~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~~~~~~ 62 (85)
...+.|.+.+.........+.. .......+++.|.+..++.... .+.|..+++.
T Consensus 472 ~~~~~I~v~d~dg~~~~~l~~~-~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~d 527 (699)
T 1n7d_A 472 SVLGTVSVADTKGVKRKTLFRE-QGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN 527 (699)
T ss_dssp TTTSCEEEEBSSSCCEEEECCC-SSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSS
T ss_pred ccCCeEEEEecCCCceEEEEeC-CCCCcceEEEccCCCcEEEcccCCCCeEEEEeCC
Confidence 3445666666553322222221 1123456778875444443332 2566666553
No 277
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=87.72 E-value=2.2 Score=23.32 Aligned_cols=29 Identities=10% Similarity=0.131 Sum_probs=24.8
Q ss_pred EEEEEecCCCCEEEEEcCCCeEEEEEcCC
Q psy7058 35 VWDAAFTLDSKFLLTASSDGVARLWNIET 63 (85)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 63 (85)
.+.+.++|++..++.....+.+.-+|+..
T Consensus 187 ~nGIv~~pdg~~Liv~~~~g~L~~fD~~~ 215 (334)
T 2p9w_A 187 YSGITFDPHSNKLIAFGGPRALTAFDVSK 215 (334)
T ss_dssp CSEEEEETTTTEEEEESSSSSEEEEECSS
T ss_pred cceEEEeCCCCEEEEEcCCCeEEEEcCCC
Confidence 66899999999888877799999999874
No 278
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=86.85 E-value=2.1 Score=22.26 Aligned_cols=59 Identities=8% Similarity=0.021 Sum_probs=39.3
Q ss_pred CceeEEeeCCCcEEEeeCCCceeeeeeeccC--------CCcEEEEEecCCCCEEEEEcCCCeEEEEEc
Q psy7058 1 MGLLATTSADQTARIWNTEDFSLVRELGTAN--------QRWVWDAAFTLDSKFLLTASSDGVARLWNI 61 (85)
Q Consensus 1 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 61 (85)
|.+++.+..+..+..+|.. ++....+.-.. -.....|++.++|...++ ++...++.|.-
T Consensus 185 g~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIv-sE~n~~y~f~~ 251 (255)
T 3qqz_A 185 NTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIV-SEPNRFYRFTP 251 (255)
T ss_dssp TEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEE-ETTTEEEEEEC
T ss_pred CeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEE-cCCceEEEEEe
Confidence 3567778888889999966 55544443211 135689999999985555 66667766643
No 279
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=86.60 E-value=2.2 Score=22.23 Aligned_cols=61 Identities=11% Similarity=-0.028 Sum_probs=34.8
Q ss_pred ceeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCC--CeEEEEEcCCcc
Q psy7058 2 GLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSD--GVARLWNIETGE 65 (85)
Q Consensus 2 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~i~~~~~~~~~ 65 (85)
+++++...++.|..+|... +...... .......+.+.+++.++++.... ..+..++..+++
T Consensus 44 ~lyv~d~~~~~I~~~d~~g-~~~~~~~--~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~ 106 (306)
T 2p4o_A 44 TIFVTNHEVGEIVSITPDG-NQQIHAT--VEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGT 106 (306)
T ss_dssp CEEEEETTTTEEEEECTTC-CEEEEEE--CSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSC
T ss_pred CEEEEeCCCCeEEEECCCC-ceEEEEe--CCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCe
Confidence 3344444566777777654 2222222 23457889999999865554332 246666665554
No 280
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=86.10 E-value=2.7 Score=22.64 Aligned_cols=57 Identities=11% Similarity=-0.090 Sum_probs=29.7
Q ss_pred EEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEE-EEcCC-CeEEEEEcC
Q psy7058 5 ATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL-TASSD-GVARLWNIE 62 (85)
Q Consensus 5 ~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~i~~~~~~ 62 (85)
++-...+.|.+.+............ .......+++.|.+..++ +-... +.|..+++.
T Consensus 132 ~~d~~~~~I~~~~~dG~~~~~l~~~-~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~d 190 (349)
T 3v64_C 132 WTDSGTSRIEVANLDGAHRKVLLWQ-SLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMD 190 (349)
T ss_dssp EEETTTTEEEEEETTSCSCEEEECT-TCSCEEEEEEETTTTEEEEEECSSSCEEEEEETT
T ss_pred EEcCCCCeEEEEcCCCCceEEEEeC-CCCCcceEEEecCcCeEEEeccCCCCEEEEEeCC
Confidence 3333445566666543222222212 223467889998554444 43344 678877765
No 281
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=85.92 E-value=2.9 Score=22.87 Aligned_cols=52 Identities=13% Similarity=0.184 Sum_probs=34.8
Q ss_pred CcEEEEEecCCCCEEEEEcCCCeEEEEEcCCccc--ccc----ccccccceeEEEEeC
Q psy7058 33 RWVWDAAFTLDSKFLLTASSDGVARLWNIETGEV--DKE----YSGHQKAITSLAFCD 84 (85)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~----~~~~~~~v~~~~~~~ 84 (85)
..-+.+.+.|+|.++++--..+.|++++...++. +.. +.........++++|
T Consensus 32 ~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~P 89 (347)
T 3das_A 32 NSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSP 89 (347)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECT
T ss_pred CCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEecc
Confidence 3468899999999887776588999887654432 111 122345667788776
No 282
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=85.51 E-value=2.7 Score=22.05 Aligned_cols=51 Identities=16% Similarity=0.018 Sum_probs=30.1
Q ss_pred CcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEE-cCCCeEEEEEcCC
Q psy7058 11 QTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTA-SSDGVARLWNIET 63 (85)
Q Consensus 11 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~ 63 (85)
+.+..+|..+++....... ....+.+++++++..+..+ ..++.|..|++..
T Consensus 165 g~v~~~d~~~~~~~~~~~~--~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~ 216 (322)
T 2fp8_A 165 GRLIKYDPSTKETTLLLKE--LHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEG 216 (322)
T ss_dssp EEEEEEETTTTEEEEEEEE--ESCCCEEEECTTSSEEEEEEGGGTEEEEEESSS
T ss_pred ceEEEEeCCCCEEEEeccC--CccCcceEECCCCCEEEEEeCCCCeEEEEECCC
Confidence 4455566544433221111 1224578999999865544 5568899999864
No 283
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=84.19 E-value=3.4 Score=22.24 Aligned_cols=29 Identities=17% Similarity=0.066 Sum_probs=18.5
Q ss_pred EEEEEecCCC-CEEEEEcCCCeEEEEEcCC
Q psy7058 35 VWDAAFTLDS-KFLLTASSDGVARLWNIET 63 (85)
Q Consensus 35 ~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~ 63 (85)
...+++.+.+ .+..+-...+.|.+.+...
T Consensus 118 p~glavd~~~g~ly~~d~~~~~I~~~~~dG 147 (349)
T 3v64_C 118 PGGLAVDWVHDKLYWTDSGTSRIEVANLDG 147 (349)
T ss_dssp CCEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred ccEEEEecCCCeEEEEcCCCCeEEEEcCCC
Confidence 3567777644 4445555567888888753
No 284
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=83.56 E-value=4.7 Score=23.38 Aligned_cols=61 Identities=7% Similarity=-0.025 Sum_probs=44.2
Q ss_pred eEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCcc
Q psy7058 4 LATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGE 65 (85)
Q Consensus 4 l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 65 (85)
+..-..-|.+++||+.++.++..-+. ...++...+......-++.....|.|.-..+.+.+
T Consensus 273 iyviTK~G~i~lyDleTgt~i~~nrI-s~~~iF~t~~~~~~~Gi~~Vnr~GqVl~v~v~e~~ 333 (494)
T 1bpo_A 273 VFLITKYGYIHLYDLETGTCIYMNRI-SGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEEN 333 (494)
T ss_dssp EEEEETTSEEEEEETTTCCEEEEEEC-CSSCEEEEEEETTTTEEEEEETTCEEEEEEECTTT
T ss_pred EEEEecCceEEEEecccceeeeeecc-cCCceEEecccCCCCcEEEEccCceEEEEEEcccc
Confidence 44556778999999999999888776 45556666555556666666788887777776544
No 285
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=82.82 E-value=4.2 Score=22.24 Aligned_cols=56 Identities=9% Similarity=-0.078 Sum_probs=28.4
Q ss_pred EeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEc-CC-CeEEEEEcC
Q psy7058 6 TTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTAS-SD-GVARLWNIE 62 (85)
Q Consensus 6 ~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~i~~~~~~ 62 (85)
+-...+.|.+.+.........+.. .......+++.|.+..++... .. +.|..+++.
T Consensus 176 ~d~~~~~I~~~~~dg~~~~~l~~~-~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~d 233 (386)
T 3v65_B 176 TDSGTSRIEVANLDGAHRKVLLWQ-SLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMD 233 (386)
T ss_dssp EETTTTEEEECBTTSCSCEEEECS-SCSCEEEEEEETTTTEEEEEECSSSCEEEEEETT
T ss_pred EcCCCCeEEEEeCCCCceEEeecC-CCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCC
Confidence 333344555555443222222221 223467888888655544433 33 677777764
No 286
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=82.67 E-value=5.2 Score=23.16 Aligned_cols=59 Identities=7% Similarity=0.040 Sum_probs=34.8
Q ss_pred eeEEeeCCCcEEEeeCC-------Ccee-----------eee-eeccCCCcEEEEEecCCCCEEEE-EcCCCeEEEEEc
Q psy7058 3 LLATTSADQTARIWNTE-------DFSL-----------VRE-LGTANQRWVWDAAFTLDSKFLLT-ASSDGVARLWNI 61 (85)
Q Consensus 3 ~l~~~~~~~~i~~~d~~-------~~~~-----------~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~ 61 (85)
++++-..++.|+.+|.. ++.. ... ...........++++|++..++. -...+.|+.++.
T Consensus 261 LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~ 339 (496)
T 3kya_A 261 LYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDY 339 (496)
T ss_dssp EEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred EEEEECCCCEEEEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEec
Confidence 34455566678888876 3432 111 11112234578999999996444 456678888664
No 287
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=80.92 E-value=4.1 Score=22.36 Aligned_cols=30 Identities=10% Similarity=0.185 Sum_probs=23.6
Q ss_pred cEEEEEecCCCCEEEEEc-CCCeEEEEEcCC
Q psy7058 34 WVWDAAFTLDSKFLLTAS-SDGVARLWNIET 63 (85)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~ 63 (85)
..+.++|+||++.++.+. ..+.|..|++..
T Consensus 222 ~pNGia~spDg~~lYvadt~~~~I~~~~~~~ 252 (355)
T 3sre_A 222 FANGINISPDGKYVYIAELLAHKIHVYEKHA 252 (355)
T ss_dssp SEEEEEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred ccCcceECCCCCEEEEEeCCCCeEEEEEECC
Confidence 468899999998776554 567899999863
No 288
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=79.82 E-value=5.9 Score=21.95 Aligned_cols=56 Identities=16% Similarity=0.229 Sum_probs=35.7
Q ss_pred eeEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCC----CC---EEE-EEcC--CCeEEEEEcC
Q psy7058 3 LLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLD----SK---FLL-TASS--DGVARLWNIE 62 (85)
Q Consensus 3 ~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~----~~---~~~-~~~~--~~~i~~~~~~ 62 (85)
+++.....+-+.+||+ .++.+..+.. ..++.+.+.|+ +. +++ +.-. +..|.+|++.
T Consensus 42 ~ii~t~k~~gL~Vydl-~G~~l~~~~~---g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iD 107 (355)
T 3amr_A 42 KLITTNKKSGLVVYSL-DGKMLHSYNT---GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAID 107 (355)
T ss_dssp EEEEEETTTEEEEEET-TSCEEEEECC---SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEEC
T ss_pred EEEEEcCCCCEEEEcC-CCcEEEEccC---CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEEC
Confidence 4556666778999999 6888777653 33566655542 22 223 3333 5789999773
No 289
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=79.10 E-value=3.9 Score=24.50 Aligned_cols=28 Identities=18% Similarity=0.012 Sum_probs=16.1
Q ss_pred EEEEecCC-CCEEEEEcCCCeEEEEEcCC
Q psy7058 36 WDAAFTLD-SKFLLTASSDGVARLWNIET 63 (85)
Q Consensus 36 ~~~~~~~~-~~~~~~~~~~~~i~~~~~~~ 63 (85)
..+++.+. +.++++-...+.|.++++..
T Consensus 456 ~glavD~~~g~LY~tD~~~~~I~v~d~dg 484 (699)
T 1n7d_A 456 DGLAVDWIHSNIYWTDSVLGTVSVADTKG 484 (699)
T ss_dssp CCEECCCSSSBCEECCTTTSCEEEEBSSS
T ss_pred ceEEEEeeCCcEEEEeccCCeEEEEecCC
Confidence 45666653 34444434566788887653
No 290
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=79.02 E-value=5.6 Score=21.22 Aligned_cols=29 Identities=17% Similarity=0.035 Sum_probs=18.0
Q ss_pred EEEEEecCC-CCEEEEEcCCCeEEEEEcCC
Q psy7058 35 VWDAAFTLD-SKFLLTASSDGVARLWNIET 63 (85)
Q Consensus 35 ~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~ 63 (85)
...+++.+. +.+..+-...+.|.+++...
T Consensus 81 p~glavd~~~g~ly~~d~~~~~I~~~~~dG 110 (318)
T 3sov_A 81 PDGLACDWLGEKLYWTDSETNRIEVSNLDG 110 (318)
T ss_dssp CCEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred ccEEEEEcCCCeEEEEECCCCEEEEEECCC
Confidence 345777764 44444555567888888753
No 291
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=78.71 E-value=6.4 Score=21.73 Aligned_cols=54 Identities=9% Similarity=-0.031 Sum_probs=27.9
Q ss_pred eCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEc--CCCeEEEEEcC
Q psy7058 8 SADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTAS--SDGVARLWNIE 62 (85)
Q Consensus 8 ~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~~~~ 62 (85)
...+.|.+.++........+.. .......+++.|.+..++... ..+.|...++.
T Consensus 178 ~~~~~I~~~~~~g~~~~~l~~~-~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~d 233 (400)
T 3p5b_L 178 SVLGTVSVADTKGVKRKTLFRE-NGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN 233 (400)
T ss_dssp TTTTEEEEECTTTCSEEEEEEC-SSCCEEEEEEETTTTEEEEEECSSSCCEEEEETT
T ss_pred CCCCeEEEEeCCCCceEEEEeC-CCCCcceEEEecccCeEEEEeCCCCCEEEEEeCC
Confidence 3344555555543322222222 223367888888555544433 24677777764
No 292
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=78.07 E-value=5.8 Score=20.95 Aligned_cols=56 Identities=11% Similarity=-0.039 Sum_probs=28.9
Q ss_pred EeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcC-C-CeEEEEEcC
Q psy7058 6 TTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASS-D-GVARLWNIE 62 (85)
Q Consensus 6 ~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~i~~~~~~ 62 (85)
+-...+.|.+.+............ .......+++.|.+..++..+. . +.|..+++.
T Consensus 94 ~d~~~~~I~~~~~~g~~~~~~~~~-~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~d 151 (316)
T 1ijq_A 94 TDSVLGTVSVADTKGVKRKTLFRE-NGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN 151 (316)
T ss_dssp EETTTTEEEEEETTSSSEEEEEEC-TTCCEEEEEEETTTTEEEEEECSSSCEEEEEETT
T ss_pred EECCCCEEEEEeCCCCceEEEEEC-CCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCC
Confidence 334445566666543222222221 2234678889885554444333 2 677777764
No 293
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=77.90 E-value=7 Score=21.78 Aligned_cols=44 Identities=14% Similarity=0.115 Sum_probs=32.2
Q ss_pred EEEEEecCCCCEEEEEcCCCeEEEEEcCCcccccccccccccee
Q psy7058 35 VWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAIT 78 (85)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~ 78 (85)
-.++..++....+.....-|.+.+||+.++.++..-+-..+.|.
T Consensus 262 PVamqvs~kygviyviTK~G~ihlyDleTgt~i~~nrIS~d~iF 305 (365)
T 2xzh_A 262 PVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIF 305 (365)
T ss_dssp EEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEE
T ss_pred eEEEEecccCCEEEEEeCCcEEEEEEcccCcEEEEeccCCCceE
Confidence 45667777777788888999999999999987755444444443
No 294
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=77.44 E-value=7.1 Score=21.56 Aligned_cols=31 Identities=16% Similarity=-0.082 Sum_probs=19.5
Q ss_pred cEEEEEecCC-CCEEEEEcCCCeEEEEEcCCc
Q psy7058 34 WVWDAAFTLD-SKFLLTASSDGVARLWNIETG 64 (85)
Q Consensus 34 ~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~ 64 (85)
....+++.+. +.+..+-...+.|.+.++...
T Consensus 160 ~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~ 191 (400)
T 3p5b_L 160 APDGLAVDWIHSNIYWTDSVLGTVSVADTKGV 191 (400)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEECTTTC
T ss_pred CcccEEEEecCCceEEEECCCCeEEEEeCCCC
Confidence 3567777774 444445555678888877543
No 295
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=77.20 E-value=6.3 Score=20.84 Aligned_cols=29 Identities=14% Similarity=-0.036 Sum_probs=18.5
Q ss_pred EEEEEecCCC-CEEEEEcCCCeEEEEEcCC
Q psy7058 35 VWDAAFTLDS-KFLLTASSDGVARLWNIET 63 (85)
Q Consensus 35 ~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~ 63 (85)
...+++.+.+ ....+-...+.|.+++...
T Consensus 79 p~glavd~~~~~ly~~d~~~~~I~~~~~~g 108 (316)
T 1ijq_A 79 PDGLAVDWIHSNIYWTDSVLGTVSVADTKG 108 (316)
T ss_dssp CCEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred cCEEEEeecCCeEEEEECCCCEEEEEeCCC
Confidence 4567777644 4444545677888888753
No 296
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=75.80 E-value=7.2 Score=20.81 Aligned_cols=56 Identities=13% Similarity=-0.026 Sum_probs=28.5
Q ss_pred EeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEc--CCCeEEEEEcC
Q psy7058 6 TTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTAS--SDGVARLWNIE 62 (85)
Q Consensus 6 ~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~~~~ 62 (85)
+-...+.|.+++..... ...+..........+++.|.+..++... ..+.|...++.
T Consensus 96 ~d~~~~~I~~~~~dG~~-~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~d 153 (318)
T 3sov_A 96 TDSETNRIEVSNLDGSL-RKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMD 153 (318)
T ss_dssp EETTTTEEEEEETTSCS-CEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETT
T ss_pred EECCCCEEEEEECCCCc-EEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcC
Confidence 33344456666654322 2222211223457888888544444433 35677777764
No 297
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=74.57 E-value=11 Score=22.51 Aligned_cols=39 Identities=15% Similarity=-0.009 Sum_probs=25.1
Q ss_pred cEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEE
Q psy7058 12 TARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTA 50 (85)
Q Consensus 12 ~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 50 (85)
.+..++..+++...-+.......++.++|+||++.++..
T Consensus 510 ~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~ 548 (592)
T 4a9v_A 510 QMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred eEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEE
Confidence 455556555655444433234568999999999887654
No 298
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=74.44 E-value=8.6 Score=21.07 Aligned_cols=64 Identities=8% Similarity=-0.012 Sum_probs=31.0
Q ss_pred EeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCcccccccc
Q psy7058 6 TTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYS 71 (85)
Q Consensus 6 ~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 71 (85)
+-...+.|..+|...... ..+..........+++ ..+..+.+-...+.|..++..+++....+.
T Consensus 263 aD~~~~~I~~~d~dG~~~-~~~~~~~~~~P~giav-~~~~ly~td~~~~~V~~~~~~~G~~~~~i~ 326 (386)
T 3v65_B 263 VDAKHHVIERANLDGSHR-KAVISQGLPHPFAITV-FEDSLYWTDWHTKSINSANKFTGKNQEIIR 326 (386)
T ss_dssp EETTTTEEEEECTTSCSC-EEEECSSCSSEEEEEE-ETTEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred EECCCCEEEEEeCCCCee-EEEEECCCCCceEEEE-ECCEEEEeeCCCCeEEEEECCCCcceEEEc
Confidence 333445566666543222 2221111223456666 344445555566788888865555444433
No 299
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=74.31 E-value=10 Score=21.86 Aligned_cols=51 Identities=12% Similarity=0.026 Sum_probs=34.6
Q ss_pred cEEEEEecCCCCEEEEEcCCCeEEEEEcCCccc----------c--ccccc------cccceeEEEEeCC
Q psy7058 34 WVWDAAFTLDSKFLLTASSDGVARLWNIETGEV----------D--KEYSG------HQKAITSLAFCDF 85 (85)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~----------~--~~~~~------~~~~v~~~~~~~~ 85 (85)
.+..+..+|+|.+++..+. ..|.+..++.+.. + +.+.. ...+|..+.|+|.
T Consensus 67 ~i~qlvlSpsG~lLAl~g~-~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl 135 (452)
T 3pbp_A 67 DTFHVISSTSGDLLCLFND-NEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPK 135 (452)
T ss_dssp TTCEEEECTTSSEEEEECS-SEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTT
T ss_pred ceeEEEECCCCCEEEEecC-CeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccc
Confidence 4677999999999998754 4888888873310 0 11221 2467999999984
No 300
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=73.10 E-value=8.2 Score=20.22 Aligned_cols=62 Identities=13% Similarity=0.108 Sum_probs=33.5
Q ss_pred eEEeeCCCcEEEeeCCCceeeeee--ec-cCCCcEEEEEecC-CCCEEEEEcC-----------------CCeEEEEEcC
Q psy7058 4 LATTSADQTARIWNTEDFSLVREL--GT-ANQRWVWDAAFTL-DSKFLLTASS-----------------DGVARLWNIE 62 (85)
Q Consensus 4 l~~~~~~~~i~~~d~~~~~~~~~~--~~-~~~~~~~~~~~~~-~~~~~~~~~~-----------------~~~i~~~~~~ 62 (85)
|..+...+.+..+|..++...... .. ......+.+.+.+ +|...++-.. ++.+..++..
T Consensus 94 l~v~d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~ 173 (322)
T 2fp8_A 94 LYIVDCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPS 173 (322)
T ss_dssp EEEEETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETT
T ss_pred EEEEECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCC
Confidence 444444444777776644321111 11 0112467899999 8887665432 3567777765
Q ss_pred Ccc
Q psy7058 63 TGE 65 (85)
Q Consensus 63 ~~~ 65 (85)
.++
T Consensus 174 ~~~ 176 (322)
T 2fp8_A 174 TKE 176 (322)
T ss_dssp TTE
T ss_pred CCE
Confidence 443
No 301
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=71.83 E-value=11 Score=21.09 Aligned_cols=31 Identities=13% Similarity=0.141 Sum_probs=22.7
Q ss_pred EEEEEecC-CCCEEEEEcCCCeEEEEEcCCcc
Q psy7058 35 VWDAAFTL-DSKFLLTASSDGVARLWNIETGE 65 (85)
Q Consensus 35 ~~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~ 65 (85)
...++++| ++.++++-..++.|..++...+.
T Consensus 228 p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~ 259 (430)
T 3tc9_A 228 CNGAETHPINGELYFNSWNAGQVFRYDFTTQE 259 (430)
T ss_dssp CCCEEECTTTCCEEEEETTTTEEEEEETTTTE
T ss_pred ceEEEEeCCCCEEEEEECCCCEEEEEECCCCc
Confidence 45677888 67776666677889999886544
No 302
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=70.83 E-value=11 Score=20.73 Aligned_cols=66 Identities=5% Similarity=0.060 Sum_probs=40.8
Q ss_pred eeEEeeCCCcEEEeeCCCceeeee-eec-----cCCCcEEEEEe---cCCCCEEEEEc-------------CCCeEEEEE
Q psy7058 3 LLATTSADQTARIWNTEDFSLVRE-LGT-----ANQRWVWDAAF---TLDSKFLLTAS-------------SDGVARLWN 60 (85)
Q Consensus 3 ~l~~~~~~~~i~~~d~~~~~~~~~-~~~-----~~~~~~~~~~~---~~~~~~~~~~~-------------~~~~i~~~~ 60 (85)
++++.-..+.|..||...+..... +.. ........+.| .+++.+++... .+..+..||
T Consensus 27 ~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v~~~D 106 (334)
T 2p9w_A 27 FYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHGASSFHSFN 106 (334)
T ss_dssp EEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCCSSSCCEEEEEE
T ss_pred EEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccccccCCCCEEEEEc
Confidence 344555789999999875433222 221 01123578999 68877777543 257788999
Q ss_pred cC---Cccccc
Q psy7058 61 IE---TGEVDK 68 (85)
Q Consensus 61 ~~---~~~~~~ 68 (85)
+. +++.+.
T Consensus 107 l~~~~tg~~~~ 117 (334)
T 2p9w_A 107 LPLSENSKPVW 117 (334)
T ss_dssp SSCCTTCCCSE
T ss_pred CCcCCCCCEEE
Confidence 98 666543
No 303
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=70.44 E-value=16 Score=22.54 Aligned_cols=29 Identities=14% Similarity=-0.051 Sum_probs=18.9
Q ss_pred EEEEEecCCCCEEE-EEcCCCeEEEEEcCC
Q psy7058 35 VWDAAFTLDSKFLL-TASSDGVARLWNIET 63 (85)
Q Consensus 35 ~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~ 63 (85)
...+++.+.+..++ +-...+.|.+.++..
T Consensus 473 P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG 502 (791)
T 3m0c_C 473 PDGLAVDWIHSNIYWTDSVLGTVSVADTKG 502 (791)
T ss_dssp CCEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred cceeeeeecCCcEEEEecCCCeEEEEeCCC
Confidence 45677777664444 445567888888753
No 304
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=69.88 E-value=14 Score=21.59 Aligned_cols=45 Identities=13% Similarity=0.139 Sum_probs=32.7
Q ss_pred cEEEEEecCCCCEEEEEcCCCeEEEEEcCCcccccccccccccee
Q psy7058 34 WVWDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYSGHQKAIT 78 (85)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~ 78 (85)
--..+..++....+.....-|.+.+||+.++.++..-+-..+.|.
T Consensus 260 FPvamqvs~kygviyviTK~G~i~lyDleTgt~i~~nrIs~~~iF 304 (494)
T 1bpo_A 260 FPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIF 304 (494)
T ss_dssp CEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEE
T ss_pred ceeEEEecccCCEEEEEecCceEEEEecccceeeeeecccCCceE
Confidence 345677777777788888999999999999987655443444443
No 305
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=69.46 E-value=17 Score=22.44 Aligned_cols=58 Identities=12% Similarity=-0.033 Sum_probs=30.4
Q ss_pred eEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcC--CCeEEEEEcC
Q psy7058 4 LATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASS--DGVARLWNIE 62 (85)
Q Consensus 4 l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~~~~~~ 62 (85)
+++-...+.|.+.++..... ..+..........|++.|....++.... .+.|...++.
T Consensus 486 Y~tD~~~~~I~v~~ldG~~~-~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~d 545 (791)
T 3m0c_C 486 YWTDSVLGTVSVADTKGVKR-KTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN 545 (791)
T ss_dssp EEEETTTTEEEEEETTSSSE-EEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETT
T ss_pred EEEecCCCeEEEEeCCCCeE-EEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecC
Confidence 33444445666666553322 2222212234678888886555544432 3677777764
No 306
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=68.76 E-value=10 Score=19.57 Aligned_cols=61 Identities=10% Similarity=0.103 Sum_probs=31.0
Q ss_pred eeEEeeCC-----CcEEEeeCCCceeeeeeeccCC-CcEEEEEecCCCCEEEEEcCC-----CeEEEEEcCCcc
Q psy7058 3 LLATTSAD-----QTARIWNTEDFSLVRELGTANQ-RWVWDAAFTLDSKFLLTASSD-----GVARLWNIETGE 65 (85)
Q Consensus 3 ~l~~~~~~-----~~i~~~d~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-----~~i~~~~~~~~~ 65 (85)
.++.|+.+ ..+.+||..+.+-...-..... .....+.+ ++..++.|+.+ ..+.+||+.+.+
T Consensus 209 i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 280 (301)
T 2vpj_A 209 IYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATVL--RGRLYAIAGYDGNSLLSSIECYDPIIDS 280 (301)
T ss_dssp EEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBEEEEEEEETTTTE
T ss_pred EEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccceeEEEE--CCEEEEEcCcCCCcccccEEEEcCCCCe
Confidence 44555543 4578888876543221111111 11122222 66777777654 357788886553
No 307
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=67.62 E-value=18 Score=21.91 Aligned_cols=60 Identities=5% Similarity=0.009 Sum_probs=33.1
Q ss_pred eEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCc
Q psy7058 4 LATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETG 64 (85)
Q Consensus 4 l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 64 (85)
+..+..++.+..||..+.+............+.++...+++.+.+.. .++-+..|+..+.
T Consensus 186 lwigt~~~Gl~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lwigt-~~~Gl~~~~~~~~ 245 (795)
T 4a2l_A 186 IYIGTSTDGLYTYSITQKTFEKVIPILGTKQIQAILQQSPTRIWVAT-EGAGLFLINPKTK 245 (795)
T ss_dssp EEEEESSSCEEEEETTTCCEEECC----CCCEEEEEEEETTEEEEEE-BSSCEEEEETTTT
T ss_pred EEEEECCCCEEEEeCCCCeEEEecCCCCCCeeEEEEEcCCCCEEEEE-CCCCeEEEeCCCC
Confidence 44455555578888766543322111123457888777777665543 3334777887654
No 308
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=67.24 E-value=11 Score=19.46 Aligned_cols=61 Identities=13% Similarity=0.162 Sum_probs=30.8
Q ss_pred eeEEeeCC-----CcEEEeeCCCceeeeeeeccCC-CcEEEEEecCCCCEEEEEcCC-----CeEEEEEcCCcc
Q psy7058 3 LLATTSAD-----QTARIWNTEDFSLVRELGTANQ-RWVWDAAFTLDSKFLLTASSD-----GVARLWNIETGE 65 (85)
Q Consensus 3 ~l~~~~~~-----~~i~~~d~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-----~~i~~~~~~~~~ 65 (85)
.++.|+.+ ..+.+||..+.+-...-..... .....+. .++..++.|+.+ ..+.+||+.+.+
T Consensus 207 iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 278 (302)
T 2xn4_A 207 LYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVCA--VNGLLYVVGGDDGSCNLASVEYYNPTTDK 278 (302)
T ss_dssp EEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred EEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCeEEE--ECCEEEEECCcCCCcccccEEEEcCCCCe
Confidence 44555543 3577888775432221111011 1111222 267777777654 348889987653
No 309
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=66.56 E-value=14 Score=20.48 Aligned_cols=58 Identities=14% Similarity=0.023 Sum_probs=40.1
Q ss_pred eeEEeeCCCcEEEeeCC-------CceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcC
Q psy7058 3 LLATTSADQTARIWNTE-------DFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIE 62 (85)
Q Consensus 3 ~l~~~~~~~~i~~~d~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 62 (85)
+++....++.+..|++. +.+.++++.. ...+..+...+....++.+-++.-|..++..
T Consensus 145 yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l--gsq~EgcvvDd~~g~Lyv~eEd~GIw~~da~ 209 (355)
T 3amr_A 145 YAMVTGKEGEFEQYELKADKNGYISGKKVRAFKM--NSQTEGMAADDEYGRLYIAEEDEAIWKFSAE 209 (355)
T ss_dssp EEEEECSSSEEEEEEEEECTTSCEEEEEEEEEEC--SSCEEEEEEETTTTEEEEEETTTEEEEEECS
T ss_pred EEEEECCCCeEEEEEEEeCCCCcccceEEEEecC--CCCcceEEEcCCCCeEEEecccceEEEEeCC
Confidence 46677777888888772 3344555554 3457778888877888888888777666754
No 310
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=61.97 E-value=23 Score=21.12 Aligned_cols=31 Identities=13% Similarity=-0.046 Sum_probs=21.1
Q ss_pred CcEEEEEecCCCC-EEEEEcCCCeEEEEEcCC
Q psy7058 33 RWVWDAAFTLDSK-FLLTASSDGVARLWNIET 63 (85)
Q Consensus 33 ~~~~~~~~~~~~~-~~~~~~~~~~i~~~~~~~ 63 (85)
.....+++.+.+. +..+-...+.|.+.+...
T Consensus 84 ~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG 115 (619)
T 3s94_A 84 LSPDGLACDWLGEKLYWTDSETNRIEVSNLDG 115 (619)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CCcCeEEEEecCCEEEEEeCCCCEEEEEECCC
Confidence 3467888888554 444555677898888754
No 311
>3mwp_A Nucleoprotein; structural genomics, scottish structural PROT facility, SSPF, nuclear protein; 1.79A {Lassa virus josiah} PDB: 3mwt_A 3mx2_A* 3mx5_A* 3r3l_A 3t5q_A 3t5n_A
Probab=59.76 E-value=3.4 Score=23.76 Aligned_cols=19 Identities=37% Similarity=0.821 Sum_probs=12.6
Q ss_pred EEcCCCeEEEEEcCCcccc
Q psy7058 49 TASSDGVARLWNIETGEVD 67 (85)
Q Consensus 49 ~~~~~~~i~~~~~~~~~~~ 67 (85)
.+..+|.|++||+++...+
T Consensus 162 ~~~~~GVVrvWDVkd~slL 180 (577)
T 3mwp_A 162 RAGRDGVVRVWDVKNAELL 180 (577)
T ss_dssp ----CCEECSEECSCGGGG
T ss_pred CCCCCCeEEEEecCCHHHH
Confidence 5567899999999877543
No 312
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=58.00 E-value=20 Score=19.36 Aligned_cols=26 Identities=31% Similarity=0.549 Sum_probs=20.3
Q ss_pred cEEEEEecCCCCEEEEEcCCCeEEEEE
Q psy7058 34 WVWDAAFTLDSKFLLTASSDGVARLWN 60 (85)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~i~~~~ 60 (85)
.-..+.+.|+|.++++ ...+.|++++
T Consensus 32 ~P~~ia~~pdG~l~V~-e~~g~I~~i~ 57 (352)
T 2ism_A 32 VPWALAFLPDGGMLIA-ERPGRIRLFR 57 (352)
T ss_dssp CEEEEEECTTSCEEEE-ETTTEEEEEE
T ss_pred CceEEEEcCCCeEEEE-eCCCeEEEEE
Confidence 3578999999986555 4568898887
No 313
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=57.61 E-value=28 Score=20.86 Aligned_cols=38 Identities=16% Similarity=-0.010 Sum_probs=24.9
Q ss_pred EEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEE
Q psy7058 13 ARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTA 50 (85)
Q Consensus 13 i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 50 (85)
+.+.+..+++..+-+.......+..++|+||++.++..
T Consensus 511 ~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 511 MLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred EEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 44445555555444444456789999999998876554
No 314
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=54.07 E-value=51 Score=22.77 Aligned_cols=59 Identities=7% Similarity=-0.026 Sum_probs=34.7
Q ss_pred eEEeeCCCcEEEeeCCCceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCC
Q psy7058 4 LATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIET 63 (85)
Q Consensus 4 l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 63 (85)
+..-..-|.+.++|+.++..+..-+. ...+|...+-+....-++.....|.|.-..+..
T Consensus 273 iy~itk~G~~~~~d~~t~~~i~~~ri-s~~~iF~~~~~~~~~g~~~vnr~G~vl~v~v~~ 331 (1630)
T 1xi4_A 273 VFLITKYGYIHLYDLETGTCIYMNRI-SGETIFVTAPHEATAGIIGVNRKGQVLSVCVEE 331 (1630)
T ss_pred EEEEecCceEEEEecccchhhhhccc-cCCceEEeccCCCCCceEEEcCCceEEEEEEcc
Confidence 44556678899999999988776554 333444444343333444445555555444443
No 315
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=53.30 E-value=22 Score=18.39 Aligned_cols=59 Identities=12% Similarity=0.090 Sum_probs=29.4
Q ss_pred eeEEeeCC----CcEEEeeCCCceeee--eeeccCCCcEEEEEecCCCCEEEEEcCC------CeEEEEEcCCc
Q psy7058 3 LLATTSAD----QTARIWNTEDFSLVR--ELGTANQRWVWDAAFTLDSKFLLTASSD------GVARLWNIETG 64 (85)
Q Consensus 3 ~l~~~~~~----~~i~~~d~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~i~~~~~~~~ 64 (85)
.++.|+.+ ..+.+||..+.+-.. .+...... ...+.+ ++..++.|+.+ ..+.+||..+.
T Consensus 58 lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~-~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~ 128 (306)
T 3ii7_A 58 VYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDS-LAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTE 128 (306)
T ss_dssp EEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBS-CEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTT
T ss_pred EEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccc-eeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCC
Confidence 34555543 457777877643222 11111111 112222 56677776654 35888887654
No 316
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=50.61 E-value=34 Score=19.66 Aligned_cols=27 Identities=15% Similarity=0.143 Sum_probs=20.1
Q ss_pred EEEEEecCCCC-EEEEEcCCCeEEEEEc
Q psy7058 35 VWDAAFTLDSK-FLLTASSDGVARLWNI 61 (85)
Q Consensus 35 ~~~~~~~~~~~-~~~~~~~~~~i~~~~~ 61 (85)
-+.+.+.|++. .++.....+.|++++.
T Consensus 16 P~~~a~~pdG~~rl~V~er~G~i~~~~~ 43 (463)
T 2wg3_C 16 PVGALHSGDGSQRLFILEKEGYVKILTP 43 (463)
T ss_dssp EEEEECCSSSSCCEEEEETTTEEEEECT
T ss_pred ceEEEECCCCCeEEEEEeCCceEEEEeC
Confidence 57889999986 3444467899999874
No 317
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=50.43 E-value=51 Score=21.63 Aligned_cols=60 Identities=25% Similarity=0.246 Sum_probs=37.0
Q ss_pred ceeEEeeC-CCcEEEeeCCCceeeeeeeccCCCcEEEEEecC--CCCEEEEEcCCCeEEEEEc
Q psy7058 2 GLLATTSA-DQTARIWNTEDFSLVRELGTANQRWVWDAAFTL--DSKFLLTASSDGVARLWNI 61 (85)
Q Consensus 2 ~~l~~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~i~~~~~ 61 (85)
++++.|.. |++++++++.+.+..............++.+.. ...++..+-.||.+..+.+
T Consensus 572 ~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~~~ 634 (1158)
T 3ei3_A 572 PLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGL 634 (1158)
T ss_dssp SEEEEEETTTTEEEEEETTTCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEEEEEE
T ss_pred cEEEEEECCCCEEEEEECCCCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEEEE
Confidence 46788885 999999999876665443321222233343322 3356777778888765554
No 318
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=50.08 E-value=34 Score=19.49 Aligned_cols=24 Identities=13% Similarity=0.170 Sum_probs=17.1
Q ss_pred CcEEEEEecCCCC-EEEEEcCCCeE
Q psy7058 33 RWVWDAAFTLDSK-FLLTASSDGVA 56 (85)
Q Consensus 33 ~~~~~~~~~~~~~-~~~~~~~~~~i 56 (85)
..+..+.+.|||. +.++-+..+.+
T Consensus 405 ~R~~dv~~gpDG~~Lyv~~d~~G~i 429 (454)
T 1cru_A 405 NRYRDVIASPDGNVLYVLTDTAGNV 429 (454)
T ss_dssp SCEEEEEECTTSSCEEEEECSSCCE
T ss_pred CCceeEEECCCCCEEEEEECCCCCC
Confidence 4688899999997 65555545544
No 319
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=49.41 E-value=30 Score=18.75 Aligned_cols=48 Identities=10% Similarity=0.117 Sum_probs=24.7
Q ss_pred eeEEeeCCCcEEEeeCCCceeeee--eeccCCCcEEEEEecCCCCEEEEE
Q psy7058 3 LLATTSADQTARIWNTEDFSLVRE--LGTANQRWVWDAAFTLDSKFLLTA 50 (85)
Q Consensus 3 ~l~~~~~~~~i~~~d~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 50 (85)
++++.-..+.|...++..++.... +.......+..+.+.|+|.+.++.
T Consensus 291 l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~t 340 (353)
T 2g8s_A 291 LFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPDGYLYVLT 340 (353)
T ss_dssp EEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECTTSCEEEEE
T ss_pred EEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECCCCcEEEEE
Confidence 334444445555555544333222 111122357888889998866543
No 320
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=46.70 E-value=47 Score=20.20 Aligned_cols=62 Identities=8% Similarity=0.057 Sum_probs=38.7
Q ss_pred eEEeeCCCcEEEeeCCCceeeeeeec-------cCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCcc
Q psy7058 4 LATTSADQTARIWNTEDFSLVRELGT-------ANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGE 65 (85)
Q Consensus 4 l~~~~~~~~i~~~d~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 65 (85)
|..|..++-|..||..++....-... -....|.++...+++..+-.+..++-+..++..+++
T Consensus 370 lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~ 438 (795)
T 4a2l_A 370 LWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQ 438 (795)
T ss_dssp EEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCC
T ss_pred EEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCc
Confidence 55666676788888776543221111 013458888888888844455666678888876654
No 321
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=44.88 E-value=47 Score=19.65 Aligned_cols=55 Identities=13% Similarity=0.169 Sum_probs=31.1
Q ss_pred eEEeeCCCcEEEeeCCCc----eeeeeeecc-CCCcEE-EEEecCCCCEEEEEcCCCeEEE
Q psy7058 4 LATTSADQTARIWNTEDF----SLVRELGTA-NQRWVW-DAAFTLDSKFLLTASSDGVARL 58 (85)
Q Consensus 4 l~~~~~~~~i~~~d~~~~----~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~i~~ 58 (85)
+..|..+|.|.-..+... .....+... ...+|. .+.++++...++.++..+.+++
T Consensus 416 ~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~~~~~Lyv~s~~~V~kv 476 (539)
T 3al9_A 416 VFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRV 476 (539)
T ss_dssp EEEEETTSEEEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred EEEEcCCCeEEEEEeCCCCccceeEEEEEeecCCCccccceEEccCCCeEEEEecccccee
Confidence 456677776654333211 112222221 244564 7888888888888877765554
No 322
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=42.76 E-value=53 Score=19.70 Aligned_cols=29 Identities=10% Similarity=-0.011 Sum_probs=18.0
Q ss_pred EEEEEecCCCCEE-EEEcCCCeEEEEEcCC
Q psy7058 35 VWDAAFTLDSKFL-LTASSDGVARLWNIET 63 (85)
Q Consensus 35 ~~~~~~~~~~~~~-~~~~~~~~i~~~~~~~ 63 (85)
...+++.+.+..+ .+-...+.|.+.++..
T Consensus 82 P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG 111 (628)
T 4a0p_A 82 PEGMAVDWLGKNLYWADTGTNRIEVSKLDG 111 (628)
T ss_dssp CCEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred cceEEEEeCCCEEEEEECCCCEEEEEecCC
Confidence 4567776654444 4444567888888753
No 323
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=41.86 E-value=37 Score=17.66 Aligned_cols=61 Identities=8% Similarity=0.087 Sum_probs=30.2
Q ss_pred eeEEeeCC-----CcEEEeeCCCceeeeeeeccCC-CcEEEEEecCCCCEEEEEcCC-----CeEEEEEcCCcc
Q psy7058 3 LLATTSAD-----QTARIWNTEDFSLVRELGTANQ-RWVWDAAFTLDSKFLLTASSD-----GVARLWNIETGE 65 (85)
Q Consensus 3 ~l~~~~~~-----~~i~~~d~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-----~~i~~~~~~~~~ 65 (85)
.++.|+.+ ..+.+||..+.+-...-..... .....+.+ ++.+++.|+.+ ..+.+||+.+.+
T Consensus 218 iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 289 (308)
T 1zgk_A 218 IYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSALGITVH--QGRIYVLGGYDGHTFLDSVECYDPDTDT 289 (308)
T ss_dssp EEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred EEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCccceEEEEE--CCEEEEEcCcCCCcccceEEEEcCCCCE
Confidence 34555543 4577888776433221111011 11112222 56677777643 457888887553
No 324
>3ol2_B Plexin-B1; beta-propeller, signalling, extacellular, signaling protein; HET: NAG BMA; 2.99A {Homo sapiens}
Probab=38.05 E-value=63 Score=19.19 Aligned_cols=55 Identities=7% Similarity=-0.057 Sum_probs=32.4
Q ss_pred eEEeeCCCcEEEeeCC-Cc--eeeeeeeccCCCcE-EEEEecCCCCEEEEEcCCCeEEE
Q psy7058 4 LATTSADQTARIWNTE-DF--SLVRELGTANQRWV-WDAAFTLDSKFLLTASSDGVARL 58 (85)
Q Consensus 4 l~~~~~~~~i~~~d~~-~~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~ 58 (85)
+..|..+|.|.-.-+. .. .....+......+| ..+.++++...++.++..+.+++
T Consensus 403 ~FlGT~~G~l~Kv~~~~~~~~~~~ee~~v~~~~pi~~~l~l~~~~~~Lyv~s~~~V~~v 461 (528)
T 3ol2_B 403 AFLGDSQGQLHRVYLGPGSDGHPYSTQSIQQGSAVSRDLTFDGTFEHLYVMTQSTLLKV 461 (528)
T ss_dssp EEEEETTSEEEEEECSSSCCSCCSEEEESSTTSCCCSCCEECTTSSEEEEECSSCEEEE
T ss_pred EEEECCCCeEEEEEEcCCCCeeEEeeeccCCCCcceeeEEEecCCCEEEEEeCCEEEEE
Confidence 4567777876633322 21 12222222234556 37888888888888887776665
No 325
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=37.76 E-value=55 Score=18.44 Aligned_cols=27 Identities=11% Similarity=0.035 Sum_probs=14.9
Q ss_pred EEEEEec-CCCCEEEEEcCCCeEEEEEc
Q psy7058 35 VWDAAFT-LDSKFLLTASSDGVARLWNI 61 (85)
Q Consensus 35 ~~~~~~~-~~~~~~~~~~~~~~i~~~~~ 61 (85)
...+++. +++.++++-..++.|+.+++
T Consensus 404 P~giavd~~~g~lyVaD~~n~rIr~i~~ 431 (433)
T 4hw6_A 404 PTSIAYDMKRKCFYIGDCDNHRVRKIAP 431 (433)
T ss_dssp EEEEEEETTTTEEEEEEGGGTEEEEEEE
T ss_pred CcEEEEECCCCEEEEEeCCCCEEEEEec
Confidence 4556666 45555544445556666554
No 326
>1ukf_A Avirulence protein AVRPPH3; AVRPPHB, hypersensitive response, hydrolase; 1.35A {Pseudomonas syringae PV} SCOP: d.3.1.10
Probab=37.57 E-value=37 Score=17.15 Aligned_cols=22 Identities=5% Similarity=0.122 Sum_probs=15.6
Q ss_pred eEEeeCCCcEEEeeCCCceeee
Q psy7058 4 LATTSADQTARIWNTEDFSLVR 25 (85)
Q Consensus 4 l~~~~~~~~i~~~d~~~~~~~~ 25 (85)
+++...++++.++|.+-|+-..
T Consensus 134 ia~S~~g~~~tlFDPN~GEF~v 155 (188)
T 1ukf_A 134 IACSCEGSQFKLFDPNLGEFQS 155 (188)
T ss_dssp EEEEEETTEEEEEETTTEEEEE
T ss_pred EEeccCCCeEEEeCCCCceeec
Confidence 5566677888899987766533
No 327
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=35.50 E-value=75 Score=19.33 Aligned_cols=60 Identities=8% Similarity=-0.160 Sum_probs=35.0
Q ss_pred eEEeeCCCcEEEeeCCCceeeeeee-ccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCCcc
Q psy7058 4 LATTSADQTARIWNTEDFSLVRELG-TANQRWVWDAAFTLDSKFLLTASSDGVARLWNIETGE 65 (85)
Q Consensus 4 l~~~~~~~~i~~~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 65 (85)
|..|..++-+..+|..+++...-.. ......+.++...+++.+.+.. . +-+..++..+++
T Consensus 420 lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lwigt-~-~Gl~~~~~~~~~ 480 (781)
T 3v9f_A 420 LWFGTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIWIGT-H-AGVFVIDLASKK 480 (781)
T ss_dssp EEEEETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEEEEE-T-TEEEEEESSSSS
T ss_pred EEEEeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEEEEE-C-CceEEEeCCCCe
Confidence 4445555667777776554322111 1123468888888777755543 3 457778876544
No 328
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=34.81 E-value=1.2e+02 Score=21.31 Aligned_cols=36 Identities=14% Similarity=0.176 Sum_probs=26.9
Q ss_pred EEEEecCCCCEEEEEcCCCeEEEEEcCCcccccccc
Q psy7058 36 WDAAFTLDSKFLLTASSDGVARLWNIETGEVDKEYS 71 (85)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 71 (85)
..+..++....+...+.-|.+.+||+.++.++..-+
T Consensus 262 v~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~~r 297 (1630)
T 1xi4_A 262 VAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNR 297 (1630)
T ss_pred eEEEeccccCEEEEEecCceEEEEecccchhhhhcc
Confidence 456667666677777889999999999987664433
No 329
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=34.06 E-value=77 Score=19.00 Aligned_cols=29 Identities=7% Similarity=-0.005 Sum_probs=18.0
Q ss_pred EEEEEecCCCC-EEEEEcCCCeEEEEEcCC
Q psy7058 35 VWDAAFTLDSK-FLLTASSDGVARLWNIET 63 (85)
Q Consensus 35 ~~~~~~~~~~~-~~~~~~~~~~i~~~~~~~ 63 (85)
...+++.+.+. ...+-...+.|.+.++..
T Consensus 394 p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G 423 (619)
T 3s94_A 394 PDGIAVDWVARNLYWTDTGTDRIEVTRLNG 423 (619)
T ss_dssp CCEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred cCceEEecccCcEEEEeCCCCcEEEEeCCC
Confidence 45677776444 444445567888887753
No 330
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=33.84 E-value=55 Score=20.12 Aligned_cols=33 Identities=15% Similarity=0.224 Sum_probs=22.8
Q ss_pred EEEEE-ecCCCCEEEEE-c----CCCeEEEEEcCCcccc
Q psy7058 35 VWDAA-FTLDSKFLLTA-S----SDGVARLWNIETGEVD 67 (85)
Q Consensus 35 ~~~~~-~~~~~~~~~~~-~----~~~~i~~~~~~~~~~~ 67 (85)
...+. ++|+++.++.+ + +...++++|+.+++.+
T Consensus 131 ~~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~ 169 (711)
T 4hvt_A 131 YRGVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFV 169 (711)
T ss_dssp EEEEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEEC
T ss_pred EeceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcC
Confidence 44555 88999876643 2 2247999999888755
No 331
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=33.29 E-value=75 Score=18.66 Aligned_cols=49 Identities=10% Similarity=0.192 Sum_probs=29.2
Q ss_pred EEeeCCCcEEEeeCCCceeeeeeeccC--CCcEEEEEe-------cCCCCEEEEEcCC
Q psy7058 5 ATTSADQTARIWNTEDFSLVRELGTAN--QRWVWDAAF-------TLDSKFLLTASSD 53 (85)
Q Consensus 5 ~~~~~~~~i~~~d~~~~~~~~~~~~~~--~~~~~~~~~-------~~~~~~~~~~~~~ 53 (85)
++....+.|++.|..+.+......... ......++| ++++..++.....
T Consensus 156 v~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~ 213 (496)
T 3kya_A 156 ICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDY 213 (496)
T ss_dssp EEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECC
T ss_pred EEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCC
Confidence 333334567778877665544333211 224788999 9999866555444
No 332
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=32.68 E-value=59 Score=17.28 Aligned_cols=37 Identities=5% Similarity=-0.074 Sum_probs=21.4
Q ss_pred ceeeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEE
Q psy7058 21 FSLVRELGTANQRWVWDAAFTLDSKFLLTASSDGVAR 57 (85)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 57 (85)
++............+..+.+.+++.+++.+......+
T Consensus 151 G~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~~~ 187 (327)
T 2xbg_A 151 GKNWQALVQEAIGVMRNLNRSPSGEYVAVSSRGSFYS 187 (327)
T ss_dssp TSSEEEEECSCCCCEEEEEECTTSCEEEEETTSSEEE
T ss_pred CCCCEEeecCCCcceEEEEEcCCCcEEEEECCCcEEE
Confidence 3333333332344678888998888877664443333
No 333
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=31.65 E-value=93 Score=19.20 Aligned_cols=28 Identities=21% Similarity=0.273 Sum_probs=22.5
Q ss_pred CCCcEEEEEecCCCCEEEEEcCCCeEEE
Q psy7058 31 NQRWVWDAAFTLDSKFLLTASSDGVARL 58 (85)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 58 (85)
...+|..+.++++...+..++..+.+++
T Consensus 468 ~~~pI~~L~ld~~~~~LYV~t~~~V~kV 495 (667)
T 4gz8_A 468 EPTTISAMELSTKQQQLYIGSTAGVAQL 495 (667)
T ss_dssp SCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred CCceeeeEEEcCCCCEEEEEECCEEEEE
Confidence 4556888999999999999888876664
No 334
>1sr4_A CDT A, cytolethal distending toxin subunit A; bacterial, virulence, DNA damage, genotoxin, cytotoxins, cell cycle, apoptosis, lectin; 2.00A {Haemophilus ducreyi} SCOP: b.42.2.1 PDB: 2f2f_A
Probab=31.30 E-value=45 Score=17.12 Aligned_cols=18 Identities=6% Similarity=0.206 Sum_probs=10.9
Q ss_pred eeCCCcEEEeeCCCceee
Q psy7058 7 TSADQTARIWNTEDFSLV 24 (85)
Q Consensus 7 ~~~~~~i~~~d~~~~~~~ 24 (85)
+-.+..|.||....+.-+
T Consensus 65 ~~ng~~lt~Wa~~~~nw~ 82 (206)
T 1sr4_A 65 GQNGALLTVWALAKRNWL 82 (206)
T ss_dssp ETTSEEEEECSCSTTCBE
T ss_pred cCCCCEEEEEecCCCcce
Confidence 334456778888765533
No 335
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=30.75 E-value=62 Score=16.89 Aligned_cols=22 Identities=18% Similarity=0.438 Sum_probs=14.4
Q ss_pred CCCEEEEEcCCC-----eEEEEEcCCc
Q psy7058 43 DSKFLLTASSDG-----VARLWNIETG 64 (85)
Q Consensus 43 ~~~~~~~~~~~~-----~i~~~~~~~~ 64 (85)
++..++.|+.++ .+.+||+.+.
T Consensus 196 ~~~iyv~GG~~~~~~~~~~~~yd~~~~ 222 (315)
T 4asc_A 196 DGRIIVAAGVTDTGLTSSAEVYSITDN 222 (315)
T ss_dssp TTEEEEEEEECSSSEEEEEEEEETTTT
T ss_pred CCEEEEEeccCCCCccceEEEEECCCC
Confidence 566777766543 4778887654
No 336
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=29.23 E-value=91 Score=18.32 Aligned_cols=27 Identities=22% Similarity=0.272 Sum_probs=21.7
Q ss_pred CCcEEEEEecCCCCEEEEEcCCCeEEE
Q psy7058 32 QRWVWDAAFTLDSKFLLTASSDGVARL 58 (85)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~i~~ 58 (85)
..+|..+.++++...+..++.++.+++
T Consensus 461 ~~pI~~m~l~~~~~~Lyv~s~~~V~~v 487 (495)
T 1q47_A 461 PTTISAMELSTKQQQLYIGSTAGVAQL 487 (495)
T ss_dssp CCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred CCccceEEEcCCCCEEEEEECCeEEEE
Confidence 457889999999889988888876664
No 337
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=28.98 E-value=1e+02 Score=18.79 Aligned_cols=23 Identities=17% Similarity=0.284 Sum_probs=16.2
Q ss_pred CCCCEEEEEcCCC--eEEEEEcCCc
Q psy7058 42 LDSKFLLTASSDG--VARLWNIETG 64 (85)
Q Consensus 42 ~~~~~~~~~~~~~--~i~~~~~~~~ 64 (85)
.++..++.|+.++ .+.+||..+.
T Consensus 499 ~~~~iyv~GG~~~~~~v~~yd~~t~ 523 (695)
T 2zwa_A 499 PDGNVLILGGVTEGPAMLLYNVTEE 523 (695)
T ss_dssp TTSCEEEECCBCSSCSEEEEETTTT
T ss_pred cCCEEEEECCCCCCCCEEEEECCCC
Confidence 3777777776544 6888887654
No 338
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=27.26 E-value=74 Score=16.64 Aligned_cols=22 Identities=9% Similarity=0.179 Sum_probs=14.2
Q ss_pred CCCEEEEEcC------CCeEEEEEcCCc
Q psy7058 43 DSKFLLTASS------DGVARLWNIETG 64 (85)
Q Consensus 43 ~~~~~~~~~~------~~~i~~~~~~~~ 64 (85)
++..++.|+. ...+.+||+.+.
T Consensus 158 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~ 185 (318)
T 2woz_A 158 NGMIYCLGGKTDDKKCTNRVFIYNPKKG 185 (318)
T ss_dssp TTEEEEECCEESSSCBCCCEEEEETTTT
T ss_pred CCEEEEEcCCCCCCCccceEEEEcCCCC
Confidence 5666666653 235888888654
No 339
>3u0a_A Acyl-COA thioesterase II TESB2; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, hydrolase; 2.50A {Mycobacterium marinum}
Probab=26.21 E-value=74 Score=16.93 Aligned_cols=26 Identities=15% Similarity=0.265 Sum_probs=18.3
Q ss_pred cEEEEEecCCCCEEEEEcCCCeEEEE
Q psy7058 34 WVWDAAFTLDSKFLLTASSDGVARLW 59 (85)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~i~~~ 59 (85)
....--|+.+|.+++++...+.++..
T Consensus 252 l~~g~i~~~~G~LVAs~~QeglvR~~ 277 (285)
T 3u0a_A 252 LTHGKIFTQGGELVAAVMQEGLTRYP 277 (285)
T ss_dssp EEEEEEEETTCCEEEEEEEEEEEECC
T ss_pred EEEEEEECCCCCEEEEEEeeEEEEec
Confidence 34555677888888888777777653
No 340
>3rd7_A Acyl-COA thioesterase; seattle structur genomics center for infectious disease, ssgcid, hydrolase; 1.95A {Mycobacterium avium}
Probab=25.49 E-value=52 Score=17.49 Aligned_cols=23 Identities=9% Similarity=0.186 Sum_probs=15.0
Q ss_pred EEEEEecCCCCEEEEEcCCCeEE
Q psy7058 35 VWDAAFTLDSKFLLTASSDGVAR 57 (85)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~i~ 57 (85)
...--|+.+|.+++++..++.++
T Consensus 260 ~~g~i~~~~G~LVAs~~Qegl~R 282 (286)
T 3rd7_A 260 ATGTLYNRSGELVCIATQEGYFA 282 (286)
T ss_dssp EEEEEEETTSCEEEEEEEEEEEC
T ss_pred EEEEEECCCCCEEEEEEehheee
Confidence 44455677777777776666554
No 341
>1uhe_A Aspartate 1-decarboxylase alpha chain; double-PSI beta barrel, lyase; HET: NSN; 1.55A {Helicobacter pylori} SCOP: b.52.2.1 PDB: 1uhd_A
Probab=22.48 E-value=65 Score=14.37 Aligned_cols=17 Identities=18% Similarity=0.319 Sum_probs=12.4
Q ss_pred eEEEEEcCCcccccccc
Q psy7058 55 VARLWNIETGEVDKEYS 71 (85)
Q Consensus 55 ~i~~~~~~~~~~~~~~~ 71 (85)
.|.+|++.+|..+.++.
T Consensus 18 ~V~IvNvnNG~RfeTYv 34 (97)
T 1uhe_A 18 KVEIVDVNNGERFSTYV 34 (97)
T ss_dssp EEEEEETTTCCEEEEEC
T ss_pred EEEEEECCCCceEEEEE
Confidence 67888888887666544
No 342
>1vc3_B L-aspartate-alpha-decarboxylase heavy chain; tetramer, pyruvoyl group, riken structural genomics/proteomi initiative, RSGI; 1.50A {Thermus thermophilus} PDB: 2eeo_B
Probab=21.07 E-value=71 Score=14.24 Aligned_cols=18 Identities=17% Similarity=0.381 Sum_probs=12.6
Q ss_pred CeEEEEEcCCcccccccc
Q psy7058 54 GVARLWNIETGEVDKEYS 71 (85)
Q Consensus 54 ~~i~~~~~~~~~~~~~~~ 71 (85)
-.|.+|++.++..+.++.
T Consensus 18 E~V~IvNvnNG~Rf~TYv 35 (96)
T 1vc3_B 18 EQVDIYDITNGARLTTYA 35 (96)
T ss_dssp CEEEEEETTTCCEEEEEC
T ss_pred CEEEEEECCCCceEEEEE
Confidence 367888888887665543
No 343
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=20.70 E-value=1.1e+02 Score=16.19 Aligned_cols=58 Identities=7% Similarity=-0.161 Sum_probs=32.3
Q ss_pred eeEEeeCCCcEEEeeCCCce------eeeeeeccCCCcEEEEEecCCCCEEEEEcCCCeEEEEEcCC
Q psy7058 3 LLATTSADQTARIWNTEDFS------LVRELGTANQRWVWDAAFTLDSKFLLTASSDGVARLWNIET 63 (85)
Q Consensus 3 ~l~~~~~~~~i~~~d~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 63 (85)
.|....+| +++.=..+... ...++....-..+..++++|+|.+.+. .++.++-.+..+
T Consensus 6 ~l~~v~~d-~~y~G~~P~~~~~~~~~~a~~iG~~gw~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t 69 (236)
T 1tl2_A 6 MLRGVYQD-KFYQGTYPQNKNDNWLARATLIGKGGWSNFKFLFLSPGGELYGV--LNDKIYKGTPPT 69 (236)
T ss_dssp CEEEEETT-EEEEESCCCSTTCCHHHHSEEEESSSCTTCSEEEECTTSCEEEE--ETTEEEEESCCC
T ss_pred EEEEEeCC-cEEecCCCCCcccchhhhccccCccccccceeEEECCCccEEEE--eCCeEEEECCCC
Confidence 35566666 66654444332 111222111235779999999986666 667766666543
Done!