RPS-BLAST 2.2.26 [Sep-21-2011]
Database: CDD.v3.10
44,354 sequences; 10,937,602 total letters
Searching..................................................done
Query= psy706
(91 letters)
>gnl|CDD|140308 PTZ00285, PTZ00285, glucosamine-6-phosphate isomerase; Provisional.
Length = 253
Score = 114 bits (288), Expect = 3e-33
Identities = 38/61 (62%), Positives = 47/61 (77%)
Query: 7 LPRDHPESYHYYMWHNFFSHIDIQPENVHILDGNAPDLHAECVQYEKDIKEAGGIHLFVG 66
LPRDHP+SYHY+M NFF H+DI+ EN HIL+G APDL EC +YE+ I+ GGI LF+
Sbjct: 77 LPRDHPQSYHYFMKENFFDHVDIKEENRHILNGTAPDLEEECRRYEEKIRAVGGIDLFLA 136
Query: 67 G 67
G
Sbjct: 137 G 137
>gnl|CDD|238693 cd01399, GlcN6P_deaminase, GlcN6P_deaminase:
Glucosamine-6-phosphate (GlcN6P) deaminase subfamily;
GlcN6P deaminase catalyzes the reversible conversion of
GlcN6P to D-fructose-6-phosphate (Fru6P) and ammonium.
The reaction is an aldo-keto isomerization coupled with
an amination or deamination. It is the last step of the
metabolic pathway of N-acetyl-D-glucosamine-6-phosphate
(GlcNAc6P). GlcN6P deaminase is a hexameric enzyme that
is allosterically activated by GlcNAc6P.
Length = 232
Score = 110 bits (278), Expect = 7e-32
Identities = 42/66 (63%), Positives = 48/66 (72%), Gaps = 3/66 (4%)
Query: 7 LPRDHPESYHYYMWHNFFSHIDIQPENVHILDGNAPDLHAECVQYEKDIKEAGGIHLFVG 66
LP DHP+SYHY+M N F HIDI+PEN+HI DGNA DL AEC +YE I EAGGI L +
Sbjct: 63 LPPDHPQSYHYFMRENLFDHIDIKPENIHIPDGNAADLEAECRRYEALIAEAGGIDLQLL 122
Query: 67 GEVLIG 72
G IG
Sbjct: 123 G---IG 125
>gnl|CDD|179028 PRK00443, nagB, glucosamine-6-phosphate deaminase; Provisional.
Length = 261
Score = 111 bits (279), Expect = 7e-32
Identities = 38/61 (62%), Positives = 47/61 (77%)
Query: 7 LPRDHPESYHYYMWHNFFSHIDIQPENVHILDGNAPDLHAECVQYEKDIKEAGGIHLFVG 66
LP DHPESY Y+M NFF H+DI PEN+++L+GNAPD AEC +YE+ IK AGGI L +
Sbjct: 77 LPADHPESYRYFMRENFFDHVDIPPENINLLNGNAPDPEAECRRYEEKIKSAGGIDLQIL 136
Query: 67 G 67
G
Sbjct: 137 G 137
>gnl|CDD|129593 TIGR00502, nagB, glucosamine-6-phosphate isomerase. The set of
proteins recognized by This model includes a closely
related pair from Bacillus subtilis, one of which is
uncharacterized but included as a member of the
orthologous set [Central intermediary metabolism, Amino
sugars].
Length = 259
Score = 108 bits (272), Expect = 6e-31
Identities = 44/86 (51%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Query: 6 ALPRDHPESYHYYMWHNFFSHIDIQPENVHILDGNAPDLHAECVQYEKDIKEAGGIHLFV 65
L +HPESYH +M +NFF HIDI+PEN++IL+GNAPDL AEC +YE+ I+ GGI LF+
Sbjct: 76 GLSEEHPESYHSFMHNNFFQHIDIKPENINILNGNAPDLEAECRRYEEKIRSYGGIDLFM 135
Query: 66 GGEVLIGQIRSYNSESRKISRNTDVK 91
GG G I ++N ++ T +K
Sbjct: 136 GGIGPDGHI-AFNEPGSSLTSRTRIK 160
>gnl|CDD|235005 PRK02122, PRK02122, glucosamine-6-phosphate deaminase-like protein;
Validated.
Length = 652
Score = 72.4 bits (178), Expect = 2e-16
Identities = 26/57 (45%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 7 LPRDHPESYHYYMWHNFFSHIDIQPENVHILDGNAP--DLHAECVQYEKDIKEAGGI 61
+ D +SYH +M N F H+DI PEN+HI DG P ++ C YE+ I+ AGGI
Sbjct: 103 MQPDSLQSYHRFMKENLFDHVDIPPENIHIPDGTIPKEEIDEYCRDYEEKIEAAGGI 159
>gnl|CDD|223440 COG0363, NagB, 6-phosphogluconolactonase/Glucosamine-6-phosphate
isomerase/deaminase [Carbohydrate transport and
metabolism].
Length = 238
Score = 68.4 bits (168), Expect = 1e-15
Identities = 27/61 (44%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 8 PRDHPESYHYYMWHNFFSHIDIQPENVHILDGNAPDLHAEC-VQYEKDIKEAGGIHLFVG 66
P D PES + M N F HIDI E +H +G+A D AEC +YE + AGG L +
Sbjct: 75 PPDDPESNYGLMRRNLFDHIDIPAEFIH--NGDASDPDAECAARYEAKLPSAGGFDLILL 132
Query: 67 G 67
G
Sbjct: 133 G 133
>gnl|CDD|238258 cd00458, SugarP_isomerase, SugarP_isomerase: Sugar Phosphate
Isomerase family; includes type A ribose 5-phosphate
isomerase (RPI_A), glucosamine-6-phosphate (GlcN6P)
deaminase, and 6-phosphogluconolactonase (6PGL). RPI
catalyzes the reversible conversion of
ribose-5-phosphate to ribulose 5-phosphate, the first
step of the non-oxidative branch of the pentose
phosphate pathway. GlcN6P deaminase catalyzes the
reversible conversion of GlcN6P to
D-fructose-6-phosphate (Fru6P) and ammonium, the last
step of the metabolic pathway of
N-acetyl-D-glucosamine-6-phosphate. 6PGL converts
6-phosphoglucono-1,5-lactone to 6-phosphogluconate, the
second step of the oxidative phase of the pentose
phosphate pathway.
Length = 169
Score = 65.5 bits (159), Expect = 6e-15
Identities = 16/60 (26%), Positives = 22/60 (36%)
Query: 8 PRDHPESYHYYMWHNFFSHIDIQPENVHILDGNAPDLHAECVQYEKDIKEAGGIHLFVGG 67
P D +S F H I NVH +D + P A + + + I L V G
Sbjct: 62 PLDSDQSNFRQAKLLAFEHDIIPASNVHYVDTSLPIEKACEKYEREILDQVDAIDLAVDG 121
>gnl|CDD|216349 pfam01182, Glucosamine_iso, Glucosamine-6-phosphate
isomerases/6-phosphogluconolactonase.
Length = 191
Score = 37.1 bits (87), Expect = 3e-04
Identities = 13/56 (23%), Positives = 23/56 (41%), Gaps = 5/56 (8%)
Query: 7 LPRDHPESYHYYMWHNFFSHIDIQPENVHILDGNAPDLHAECVQYEKDIKEAGGIH 62
+P DHP+S + ++ I NVH A +YE++++ G
Sbjct: 62 VPPDHPDSNYKLAREALLDNVPIPAANVH-----PIPPEAAAERYERELRGLFGPE 112
>gnl|CDD|238694 cd01400, 6PGL, 6PGL: 6-Phosphogluconolactonase (6PGL) subfamily;
6PGL catalyzes the second step of the oxidative phase of
the pentose phosphate pathway, the hydrolyzation of
6-phosphoglucono-1,5-lactone (delta form) to
6-phosphogluconate. 6PGL is thought to guard against the
accumulation of the delta form of the lactone, which may
be toxic through its reaction with endogenous cellular
nucleophiles.
Length = 219
Score = 35.6 bits (83), Expect = 0.001
Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 5/54 (9%)
Query: 7 LPRDHPESYHYYMWH-NFFSHIDIQPENVH-ILDGNAPDLHAECVQYEKDIKEA 58
+P D P+S Y + SH+ I N+H I P+ A YEK+++
Sbjct: 63 VPPDDPDSN-YRLAREALLSHVAIPAANIHPIPTELGPEDAAA--AYEKELRAL 113
>gnl|CDD|233308 TIGR01198, pgl, 6-phosphogluconolactonase. This enzyme of the
pentose phosphate pathway is often found as a part of a
multifunctional protein with [Energy metabolism, Pentose
phosphate pathway].
Length = 233
Score = 32.0 bits (73), Expect = 0.022
Identities = 11/53 (20%), Positives = 22/53 (41%), Gaps = 2/53 (3%)
Query: 7 LPRDHPESYHYYMWHN-FFSHIDIQPENVHILDGNAPDLHAECVQYEKDIKEA 58
+P DH +S + + + I N+H + D+ YE+++ A
Sbjct: 67 VPLDHADS-NTGLAREALLDRVAIPASNIHPMPTELSDIEEAAELYEQELAAA 118
>gnl|CDD|182064 PRK09762, PRK09762, galactosamine-6-phosphate isomerase;
Provisional.
Length = 232
Score = 28.3 bits (63), Expect = 0.41
Identities = 11/61 (18%), Positives = 23/61 (37%), Gaps = 1/61 (1%)
Query: 7 LPRDHPESYHYYMWHNFFSHIDIQPENVHILDGNAPDLHAECVQYEKDIKEAGGIHLFVG 66
LP P + ++ + + ++ + + + EC + I GG+ L V
Sbjct: 72 LPLTMPGTCETFLQQHIVQPLGLREDQLISFRSEEIN-ETECERVTNLIARKGGLDLCVL 130
Query: 67 G 67
G
Sbjct: 131 G 131
>gnl|CDD|183632 PRK12626, flgB, flagellar basal body rod protein FlgB; Provisional.
Length = 162
Score = 28.4 bits (63), Expect = 0.44
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 9/50 (18%)
Query: 27 IDIQPENVHILDGNAPDLHAECVQYEKDIKEAGGIHLFVGGEVLIGQIRS 76
+ +QP LDGN DL E VQ+ + +H G V+ QI++
Sbjct: 113 MPLQPA----LDGNTVDLDTERVQFADN-----ALHYEAGMTVMTQQIKT 153
>gnl|CDD|233513 TIGR01657, P-ATPase-V, P-type ATPase of unknown pump specificity
(type V). These P-type ATPases form a distinct clade
but the substrate of their pumping activity has yet to
be determined. This clade has been designated type V in.
Length = 1054
Score = 27.3 bits (61), Expect = 1.2
Identities = 6/29 (20%), Positives = 12/29 (41%)
Query: 29 IQPENVHILDGNAPDLHAECVQYEKDIKE 57
+ P N IL P + Q + ++ +
Sbjct: 696 VNPSNTLILAEAEPPESGKPNQIKFEVID 724
>gnl|CDD|215439 PLN02819, PLN02819, lysine-ketoglutarate reductase/saccharopine
dehydrogenase.
Length = 1042
Score = 26.7 bits (59), Expect = 1.6
Identities = 10/17 (58%), Positives = 12/17 (70%), Gaps = 1/17 (5%)
Query: 23 FFSH-IDIQPENVHILD 38
FFSH QPEN+ +LD
Sbjct: 95 FFSHTHKAQPENMPLLD 111
>gnl|CDD|233874 TIGR02456, treS_nterm, trehalose synthase. Trehalose synthase
interconverts maltose and alpha, alpha-trehalose by
transglucosylation. This is one of at least three
mechanisms for biosynthesis of trehalose, an important
and widespread compatible solute. However, it is not
driven by phosphate activation of sugars and its
physiological role may tend toward trehalose
degradation. This view is accentuated by numerous
examples of fusion to a probable maltokinase domain. The
sequence region described by this model is found both as
the whole of a trehalose synthase and as the N-terminal
region of a larger fusion protein that includes
trehalose synthase activity. Several of these fused
trehalose synthases have a domain homologous to proteins
with maltokinase activity from Actinoplanes
missouriensis and Streptomyces coelicolor
(PMID:15378530) [Energy metabolism, Biosynthesis and
degradation of polysaccharides].
Length = 539
Score = 26.3 bits (58), Expect = 2.7
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 8/36 (22%)
Query: 12 PESYHYYMWHNFFSHIDIQPENVHILDGNAPDLHAE 47
P + YY WH FFSH QP+ L+ + P +H
Sbjct: 151 PVAKQYY-WHRFFSH---QPD----LNYDNPAVHDA 178
>gnl|CDD|234306 TIGR03674, fen_arch, flap structure-specific endonuclease.
Endonuclease that cleaves the 5'-overhanging flap
structure that is generated by displacement synthesis
when DNA polymerase encounters the 5'-end of a
downstream Okazaki fragment. Has 5'-endo-/exonuclease
and 5'-pseudo-Y-endonuclease activities. Cleaves the
junction between single and double-stranded regions of
flap DNA.
Length = 338
Score = 26.1 bits (58), Expect = 2.8
Identities = 12/36 (33%), Positives = 22/36 (61%), Gaps = 3/36 (8%)
Query: 22 NFFSHIDIQPENVHILDGNAPDLHAECVQYEKDIKE 57
N + I+P V++ DG P+L AE ++ ++I+E
Sbjct: 67 NLLEN-GIKP--VYVFDGKPPELKAETLEERREIRE 99
>gnl|CDD|183470 PRK12358, PRK12358, putative 6-phosphogluconolactonase;
Provisional.
Length = 239
Score = 25.9 bits (57), Expect = 3.3
Identities = 13/46 (28%), Positives = 22/46 (47%), Gaps = 8/46 (17%)
Query: 23 FFSHIDIQPENVHILD-GNAPDLHAECVQYEKDIKEAGGIHLFVGG 67
FF+ I+ EN+H L N ++++ + GG+ L V G
Sbjct: 87 FFTPAGIKEENIHKLTIDNY-------REHDQKLARDGGLDLVVLG 125
>gnl|CDD|213512 TIGR00174, miaA, tRNA dimethylallyltransferase. Alternate names
include delta(2)-isopentenylpyrophosphate transferase,
IPP transferase, 2-methylthio-N6-isopentyladenosine
tRNA modification enzyme. Catalyzes the first step in
the modification of an adenosine near the anticodon to
2-methylthio-N6-isopentyladenosine. Understanding of
substrate specificity has changed [Protein synthesis,
tRNA and rRNA base modification].
Length = 287
Score = 25.8 bits (57), Expect = 3.6
Identities = 12/47 (25%), Positives = 17/47 (36%), Gaps = 6/47 (12%)
Query: 21 HNFFSHIDIQPENVHILDGNAPDLHAECVQYEKDIKEAGGIHLFVGG 67
H+ +D +A D + + DI G I L VGG
Sbjct: 56 HHLIDILDPSESY------SAADFQTQALNAIADITARGKIPLLVGG 96
>gnl|CDD|216840 pfam02005, TRM, N2,N2-dimethylguanosine tRNA methyltransferase.
This enzyme EC:2.1.1.32 used S-AdoMet to methylate tRNA.
The TRM1 gene of Saccharomyces cerevisiae is necessary
for the N2,N2-dimethylguanosine modification of both
mitochondrial and cytoplasmic tRNAs. The enzyme is found
in both eukaryotes and archaebacteria.
Length = 375
Score = 25.4 bits (56), Expect = 4.1
Identities = 5/14 (35%), Positives = 6/14 (42%)
Query: 18 YMWHNFFSHIDIQP 31
H F ID+ P
Sbjct: 115 RENHRRFDVIDLDP 128
>gnl|CDD|240700 cd12254, RRM_hnRNPH_ESRPs_RBM12_like, RNA recognition motif found
in heterogeneous nuclear ribonucleoprotein (hnRNP) H
protein family, epithelial splicing regulatory proteins
(ESRPs), Drosophila RNA-binding protein Fusilli,
RNA-binding protein 12 (RBM12) and similar proteins.
The family includes RRM domains in the hnRNP H protein
family, G-rich sequence factor 1 (GRSF-1), ESRPs (also
termed RBM35), Drosophila Fusilli, RBM12 (also termed
SWAN), RBM12B, RBM19 (also termed RBD-1) and similar
proteins. The hnRNP H protein family includes hnRNP H
(also termed mcs94-1), hnRNP H2 (also termed FTP-3 or
hnRNP H'), hnRNP F and hnRNP H3 (also termed hnRNP
2H9), which represent a group of nuclear RNA binding
proteins that are involved in pre-mRNA processing.
GRSF-1 is a cytoplasmic poly(A)+ mRNA binding protein
which interacts with RNA in a G-rich element-dependent
manner. It may function in RNA packaging, stabilization
of RNA secondary structure, or other macromolecular
interactions. ESRP1 (also termed RBM35A) and ESRP2
(also termed RBM35B) are epithelial-specific RNA
binding proteins that promote splicing of the
epithelial variant of fibroblast growth factor receptor
2 (FGFR2), ENAH (also termed hMena), CD44 and CTNND1
(also termed p120-Catenin) transcripts. Fusilli shows
high sequence homology to ESRPs. It can regulate
endogenous FGFR2 splicing and functions as a splicing
factor. The biological roles of both, RBM12 and RBM12B,
remain unclear. RBM19 is a nucleolar protein conserved
in eukaryotes. It is involved in ribosome biogenesis by
processing rRNA. In addition, it is essential for
preimplantation development. Members in this family
contain 2~6 conserved RNA recognition motifs (RRMs),
also termed RBDs (RNA binding domains) or RNPs
(ribonucleoprotein domains). .
Length = 73
Score = 24.4 bits (54), Expect = 4.3
Identities = 8/16 (50%), Positives = 13/16 (81%)
Query: 22 NFFSHIDIQPENVHIL 37
+FFS +DI P+ +HI+
Sbjct: 18 DFFSGLDIPPDGIHIV 33
>gnl|CDD|224662 COG1748, LYS9, Saccharopine dehydrogenase and related proteins
[Amino acid transport and metabolism].
Length = 389
Score = 25.4 bits (56), Expect = 5.7
Identities = 3/21 (14%), Positives = 8/21 (38%)
Query: 23 FFSHIDIQPENVHILDGNAPD 43
+ + E++ I G +
Sbjct: 137 AAKELFDEIESIDIYVGGLGE 157
>gnl|CDD|213529 TIGR00423, TIGR00423, radical SAM domain protein, CofH subfamily.
This protein family includes the CofH protein of
coenzyme F(420) biosynthesis from Methanocaldococcus
jannaschii, but appears to hit genomes more broadly than
just the subset that make coenzyme F(420), so that
narrower group is being built as a separate family
[Hypothetical proteins, Conserved].
Length = 309
Score = 25.0 bits (55), Expect = 6.4
Identities = 16/85 (18%), Positives = 28/85 (32%), Gaps = 15/85 (17%)
Query: 11 HPESYHYYMWHNFFSHIDIQPENVHILDGNAPDLHAECVQYEKDIKEAGGIHLFVG---- 66
+P+ + F I + +VHI + +++ I+E G
Sbjct: 63 NPQ-LDIEYYEELFRAIKQEFPDVHIHAFSPMEVYFLAKNEGLSIEEVLKRLKKAGLDSM 121
Query: 67 ----GEVLIGQIRSYNSESRKISRN 87
E+L +R RKI N
Sbjct: 122 PGTGAEILDDSVR------RKICPN 140
>gnl|CDD|235616 PRK05813, PRK05813, single-stranded DNA-binding protein;
Provisional.
Length = 219
Score = 25.0 bits (55), Expect = 6.5
Identities = 11/20 (55%), Positives = 15/20 (75%), Gaps = 1/20 (5%)
Query: 60 GIHLFVGGEVLI-GQIRSYN 78
G+ L VG V++ GQ+RSYN
Sbjct: 60 GMDLKVGTLVIVEGQLRSYN 79
>gnl|CDD|153082 cd00644, HMG-CoA_reductase_classII, Class II
hydroxymethylglutaryl-coenzyme A (HMG-CoA) reductase
(HMGR). Hydroxymethylglutaryl-coenzyme A (HMG-CoA)
reductase (HMGR), class II, prokaryotic enzyme is a
homodimer. Class II enzymes are found primarily in
prokaryotes and Archaeoglobus fulgidus and are soluble
as they lack the membrane region. Enzymes catalyze the
synthesis of coenzyme A and mevalonate in isoprenoid
synthesis. Bacteria, such as Pseudomonas mevalonii,
which rely solely on mevalonate for their carbon source,
catalyze the reverse reaction, using an NAD-dependent
HMGR to deacetylate mevalonate into
3-hydroxy-3-methylglutaryl-CoA. Human and bacterial HMGR
differ in their active site architecture.
Length = 417
Score = 25.1 bits (56), Expect = 6.5
Identities = 7/22 (31%), Positives = 12/22 (54%)
Query: 53 KDIKEAGGIHLFVGGEVLIGQI 74
K +++GG ++IGQI
Sbjct: 88 KIARKSGGFKTSSSDRLMIGQI 109
>gnl|CDD|188126 TIGR01283, nifE, nitrogenase molybdenum-iron cofactor biosynthesis
protein NifE. This protein is part of the NifEN complex
involved in biosynthesis of the molybdenum-iron cofactor
used by the homologous NifDK complex of nitrogenase. In
a few species, the protein is found as a NifEN fusion
protein [Biosynthesis of cofactors, prosthetic groups,
and carriers, Other, Central intermediary metabolism,
Nitrogen fixation].
Length = 453
Score = 25.0 bits (55), Expect = 7.1
Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 32 ENVHILD-GNAPDLHAECVQYEKDIKEAGGIHLFV 65
E +LD N +L ++Y+ DI AGG +
Sbjct: 371 EGTVMLDDANPRELLKLLLEYKADILIAGGRERYT 405
>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ
cell-Associated Kinase-like Serine/Threonine Kinases.
Serine/Threonine Kinases (STKs), Male germ
cell-Associated Kinase (MAK)-like subfamily, catalytic
(c) domain. STKs catalyze the transfer of the
gamma-phosphoryl group from ATP to serine/threonine
residues on protein substrates. The MAK-like subfamily
is part of a larger superfamily that includes the
catalytic domains of other protein STKs, protein
tyrosine kinases, RIO kinases, aminoglycoside
phosphotransferase, choline kinase, and phosphoinositide
3-kinase. This subfamily is composed of human MAK and
MAK-related kinase (MRK), Saccharomyces cerevisiae
Ime2p, Schizosaccharomyces pombe Mei4-dependent protein
3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5,
Arabidopsis thaliana MHK, and similar proteins. These
proteins play important roles during meiosis. MAK is
highly expressed in testicular cells specifically in the
meiotic phase, but is not essential for spermatogenesis
and fertility. It functions as a coactivator of the
androgen receptor in prostate cells. MRK, also called
Intestinal Cell Kinase (ICK), is expressed ubiquitously,
with highest expression in the ovary and uterus. A
missense mutation in MRK causes
endocrine-cerebro-osteodysplasia (ECO), suggesting that
this protein plays an important role in the development
of many organs. MAK and MRK may be involved in
regulating cell cycle and cell fate. Ime2p is a
meiosis-specific kinase that is important during meiotic
initiation and during the later stages of meiosis. Mde3
functions downstream of the transcription factor Mei-4
which is essential for meiotic prophase I.
Length = 283
Score = 24.4 bits (54), Expect = 9.4
Identities = 8/14 (57%), Positives = 11/14 (78%), Gaps = 1/14 (7%)
Query: 21 HNFFSHIDIQPENV 34
H FF H D++PEN+
Sbjct: 118 HGFF-HRDLKPENL 130
Database: CDD.v3.10
Posted date: Mar 20, 2013 7:55 AM
Number of letters in database: 10,937,602
Number of sequences in database: 44,354
Lambda K H
0.319 0.137 0.420
Gapped
Lambda K H
0.267 0.0778 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 44354
Number of Hits to DB: 4,711,318
Number of extensions: 378564
Number of successful extensions: 393
Number of sequences better than 10.0: 1
Number of HSP's gapped: 390
Number of HSP's successfully gapped: 40
Length of query: 91
Length of database: 10,937,602
Length adjustment: 58
Effective length of query: 33
Effective length of database: 8,365,070
Effective search space: 276047310
Effective search space used: 276047310
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 53 (24.1 bits)