RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy706
(91 letters)
>1fs5_A Glucosamine-6-phosphate deaminase; allosteric enzyme, entropic
effects, aldose-ketose isomerase multiple conformers,
isomerase; HET: 16G TLA; 1.73A {Escherichia coli} SCOP:
c.124.1.1 PDB: 1cd5_A 1fqo_A* 1frz_A* 1dea_A* 1fs6_A
1fsf_A 1hor_A* 1hot_A* 2wu1_A* 1jt9_A
Length = 266
Score = 108 bits (272), Expect = 6e-31
Identities = 41/85 (48%), Positives = 60/85 (70%), Gaps = 1/85 (1%)
Query: 7 LPRDHPESYHYYMWHNFFSHIDIQPENVHILDGNAPDLHAECVQYEKDIKEAGGIHLFVG 66
LP++HPESY+ +M NFF H+DI EN+++L+GNAPD+ AEC QYE+ I+ G IHLF+G
Sbjct: 77 LPKEHPESYYSFMHRNFFDHVDIPAENINLLNGNAPDIDAECRQYEEKIRSYGKIHLFMG 136
Query: 67 GEVLIGQIRSYNSESRKISRNTDVK 91
G G I ++N + ++ T +K
Sbjct: 137 GVGNDGHI-AFNEPASSLASRTRIK 160
>3hn6_A Glucosamine-6-phosphate deaminase; niaid, ssgcid, decode, UW, SBRI,
infectious disease, LYME DI non-hodgkin lymphomas,
neuroborreliosis; 2.20A {Borrelia burgdorferi}
Length = 289
Score = 102 bits (256), Expect = 2e-28
Identities = 41/68 (60%), Positives = 51/68 (75%)
Query: 7 LPRDHPESYHYYMWHNFFSHIDIQPENVHILDGNAPDLHAECVQYEKDIKEAGGIHLFVG 66
+ +HPESYH +MW+NFFSHIDI+ EN++IL+GNA +L EC +YEK IK GGI LFVG
Sbjct: 98 IEENHPESYHSFMWNNFFSHIDIKKENINILNGNASNLKKECEEYEKKIKSFGGIMLFVG 157
Query: 67 GEVLIGQI 74
G G I
Sbjct: 158 GIGPDGHI 165
>1ne7_A Glucosamine-6-phosphate isomerase; V-type like allosteric enzyme,
conformational disorder, conformational differences,
hydrolase; HET: GLC 16G AGP; 1.75A {Homo sapiens} SCOP:
c.124.1.1
Length = 289
Score = 102 bits (256), Expect = 2e-28
Identities = 48/68 (70%), Positives = 52/68 (76%)
Query: 7 LPRDHPESYHYYMWHNFFSHIDIQPENVHILDGNAPDLHAECVQYEKDIKEAGGIHLFVG 66
LPRDHPESYH +MW+NFF HIDI PEN HILDGNA DL AEC +E+ IK AGGI LFVG
Sbjct: 77 LPRDHPESYHSFMWNNFFKHIDIHPENTHILDGNAVDLQAECDAFEEKIKAAGGIELFVG 136
Query: 67 GEVLIGQI 74
G G I
Sbjct: 137 GIGPDGHI 144
>2bkx_A Glucosamine-6-phosphate deaminase; hydrolase, substrate inhibition,
fructose-6-phosphate; HET: F6R; 1.4A {Bacillus subtilis}
PDB: 2bkv_A*
Length = 242
Score = 100 bits (251), Expect = 5e-28
Identities = 27/61 (44%), Positives = 35/61 (57%)
Query: 7 LPRDHPESYHYYMWHNFFSHIDIQPENVHILDGNAPDLHAECVQYEKDIKEAGGIHLFVG 66
L D P SYH+YM FF HID +P I +GNA DL AEC +YE+ + G + +
Sbjct: 72 LSSDDPNSYHFYMNDRFFQHIDSKPSRHFIPNGNADDLEAECRRYEQLVDSLGDTDIQLL 131
Query: 67 G 67
G
Sbjct: 132 G 132
>2ri0_A Glucosamine-6-phosphate deaminase; carbohydrate metabolism,; HET:
BTB; 1.60A {Streptococcus mutans} PDB: 2ri1_A*
Length = 234
Score = 91.9 bits (229), Expect = 6e-25
Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 3/68 (4%)
Query: 7 LPRDHPESYHYYMWHNFFSHIDIQPENVHILDGNAPDLHAECVQYEKDIKEAGGIHLFVG 66
L D +SY Y+M N F+ + ++ +G A DL E Y++ + + I L +
Sbjct: 68 LSADDKQSYAYFMKQNLFAAKPF--KKSYLPNGLAADLAKETEYYDQILAQ-YPIDLQIL 124
Query: 67 GEVLIGQI 74
G I
Sbjct: 125 GIGRNAHI 132
>3oc6_A 6-phosphogluconolactonase; ssgcid, structural genomics, seattle
structural genomics CEN infectious disease, carboxylic
ester hydrolase; 2.10A {Mycobacterium smegmatis}
Length = 248
Score = 65.7 bits (161), Expect = 7e-15
Identities = 14/61 (22%), Positives = 20/61 (32%), Gaps = 4/61 (6%)
Query: 7 LPRDHPESYHYYMWHNFFSHIDIQPENVHILDG----NAPDLHAECVQYEKDIKEAGGIH 62
+P+D E HI I P NVH + DL A Y + +
Sbjct: 80 VPQDDDERNDKQAREALLDHIGIPPVNVHAMAASDGEFGDDLEAAAAGYAQLLSANFDSS 139
Query: 63 L 63
+
Sbjct: 140 V 140
>3tx2_A Probable 6-phosphogluconolactonase; ssgcid, hydrolase; 1.50A
{Mycobacterium abscessus}
Length = 251
Score = 63.0 bits (154), Expect = 8e-14
Identities = 12/65 (18%), Positives = 22/65 (33%), Gaps = 4/65 (6%)
Query: 7 LPRDHPESYHYYMWHNFFSHIDIQPENVHILDG----NAPDLHAECVQYEKDIKEAGGIH 62
+P+ PE + W H++ N+H + DL A + YE+ +
Sbjct: 80 VPKTDPERNAWQAWEALLEHVNFPLRNMHAMPNSESEYGTDLDAAALAYEQLLAANAEPG 139
Query: 63 LFVGG 67
Sbjct: 140 QDCPA 144
>3ico_A 6PGL, 6-phosphogluconolactonase; ssgcid, infectious disease, niaid,
hydrolase, structural genomics; 2.15A {Mycobacterium
tuberculosis}
Length = 268
Score = 61.2 bits (149), Expect = 5e-13
Identities = 13/65 (20%), Positives = 21/65 (32%), Gaps = 4/65 (6%)
Query: 7 LPRDHPESYHYYMWHNFFSHIDIQPENVHILDG----NAPDLHAECVQYEKDIKEAGGIH 62
+P D E +H+DI VH + DL A + YE+ + +
Sbjct: 96 VPEDDDERNLKQARRALLNHVDIPSNQVHPMAASDGDFGGDLDAAALAYEQVLAASAAPG 155
Query: 63 LFVGG 67
Sbjct: 156 DPAPN 160
>1y89_A DEVB protein; structural genomics, protein structure initiative,
PSI, MIDW center for structural genomics, MCSG; HET:
2PE; 2.00A {Vibrio cholerae o1 biovar eltor str}
Length = 238
Score = 55.7 bits (135), Expect = 4e-11
Identities = 11/52 (21%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Query: 7 LPRDHPESYHYYMWHNFFSHIDIQPENVHILDGNAPDLHAECVQYEKDIKEA 58
+ D ES + FS I++ +N+H + G + AE ++ + +
Sbjct: 72 VAPDDAESNYGEANALLFSKINMPAQNIHRILGEN-EPQAEAERFAQAMAHV 122
>3e15_A Glucose-6-phosphate 1-dehydrogenase; 6-phosphogluconolactonase,
malaria, carbohydrate metabolism, glucose metabolism,
NADP, oxidoreductase,; HET: MSE; 2.00A {Plasmodium
vivax}
Length = 312
Score = 56.1 bits (135), Expect = 4e-11
Identities = 12/66 (18%), Positives = 22/66 (33%), Gaps = 7/66 (10%)
Query: 7 LPRDHPESYHYYMWHNFFSHIDIQP-ENVHILDGNAPDLHAECVQYEKDIKEA----GGI 61
DH S Y F + I E ++ D + ++ Y + IK +
Sbjct: 102 KRDDHKFSN-YNNIKFLFESLKINEKEQLYRPDTSK-NIVECVRDYNEKIKNMVKKYTKV 159
Query: 62 HLFVGG 67
+ + G
Sbjct: 160 DIAILG 165
>3eb9_A 6-phosphogluconolactonase; catalytic mechanism, pentose phosphate
pathway, hydrolase, zinc binding site; HET: FLC; 2.00A
{Trypanosoma brucei} PDB: 2j0e_A* 3e7f_A*
Length = 266
Score = 48.6 bits (116), Expect = 2e-08
Identities = 10/77 (12%), Positives = 18/77 (23%), Gaps = 11/77 (14%)
Query: 7 LPRDHPESYHYYMWHNFFSHIDIQPENVHILDGNAP---------DLHAECVQYEKDIKE 57
+P D +S + I + V D +A D Y K +
Sbjct: 79 VPADSTDSNYNMAREVLLHDIPD--DLVFPFDTSAVTPSAEATSADAMRVAEAYGKQLAS 136
Query: 58 AGGIHLFVGGEVLIGQI 74
+ +
Sbjct: 137 LLPLKSVGEAGPKVPVF 153
>1vl1_A 6PGL, 6-phosphogluconolactonase; TM1154, structural genomics, JCSG
structure initiative, PSI, joint center for structural
GENO hydrolase; HET: CIT; 1.55A {Thermotoga maritima}
SCOP: c.124.1.1 PDB: 1pbt_A
Length = 232
Score = 45.7 bits (109), Expect = 2e-07
Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Query: 7 LPRDHPESYHYYMWHNFFSHIDIQPENVHILDGNAPDLHAECVQYEKDIKEA 58
+P D +S + FS I NVH +D + + C +YE++I+ A
Sbjct: 84 VPLDSDQSNFRNINEVLFSRAKIPSGNVHYVDTSL-PIEKACEKYEREIRSA 134
>3lhi_A Putative 6-phosphogluconolactonase; structural genomics, joint
center for structural genomics, JCSG, protein structure
initiative, PSI-2; HET: MSE; 1.33A {Neisseria
gonorrhoeae}
Length = 232
Score = 40.0 bits (94), Expect = 2e-05
Identities = 7/62 (11%), Positives = 18/62 (29%), Gaps = 1/62 (1%)
Query: 7 LPRDHPESYHYYMWHNFFSHIDIQPENVH-ILDGNAPDLHAECVQYEKDIKEAGGIHLFV 65
+P +H +S + + + + DG + +K + +
Sbjct: 73 VPTNHADSNTGLVREYLLKNKAAAAVWIPMVEDGKTETELHPDAVVDYALKHYKQPDVLI 132
Query: 66 GG 67
G
Sbjct: 133 LG 134
>3nwp_A 6-phosphogluconolactonase; structural genomics, joint center for
structural genomics, J protein structure initiative,
PSI-biology, hydrolase; HET: MSE P6G PG4; 1.40A
{Shewanella baltica}
Length = 233
Score = 39.7 bits (93), Expect = 2e-05
Identities = 4/54 (7%), Positives = 10/54 (18%), Gaps = 1/54 (1%)
Query: 7 LPRDHPESYHYYMWHNFFSHIDIQPENVHILDGNAPDLHAECVQYEKDIKEAGG 60
+ D S + + + L A + +
Sbjct: 76 VEADADASNERLVREHLLQNR-ASNAKFRGLKNMFSTAEAGADMAAESLSNFPR 128
>3css_A 6-phosphogluconolactonase; structural genomics, medical structural
genomics of pathogen protozoa consortium, SGPP, leish
hydrolase; 1.70A {Leishmania braziliensis} PDB: 3ch7_A
Length = 267
Score = 36.9 bits (85), Expect = 3e-04
Identities = 10/80 (12%), Positives = 17/80 (21%), Gaps = 14/80 (17%)
Query: 7 LPRDHPESYHYYMWHNFFSHIDIQPENVHILDGNAP------------DLHAECVQYEKD 54
L D +S + +V +D A A YE
Sbjct: 79 LSEDDEQSNFSMATKALLRDVP--SSDVISIDRRAALATSKDEKGGLDGAWAVAQDYEVK 136
Query: 55 IKEAGGIHLFVGGEVLIGQI 74
+ G + +
Sbjct: 137 LLNCLPCKQINGTAKSVPVV 156
>3lwd_A 6-phosphogluconolactonase; structural genomics, JOI for structural
genomics, JCSG, protein structure initiative hydrolase;
1.75A {Chromohalobacter salexigens}
Length = 226
Score = 34.3 bits (79), Expect = 0.002
Identities = 5/52 (9%), Positives = 12/52 (23%), Gaps = 1/52 (1%)
Query: 7 LPRDHPESYHYYMWHNFFSHIDIQPENVHILDGNAPDLHAECVQYEKDIKEA 58
+ D +S + H L + A + ++
Sbjct: 72 VTADDADSNARLVRETLLVGP-AAEACFHPLTTDDDTPEAGVETVAERLESL 122
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 28.9 bits (64), Expect = 0.21
Identities = 23/82 (28%), Positives = 29/82 (35%), Gaps = 25/82 (30%)
Query: 1 MAKAKALPRDHPESYHYYMWHNFFSHIDIQPENVHILDGNAPDLHAECVQY--EKDIKEA 58
M A+PRD +Y M I I P V A E +QY E+ K
Sbjct: 1791 MTMQVAVPRDELGRSNYGM-------IAINPGRV------AASFSQEALQYVVERVGKRT 1837
Query: 59 GGIHLFVGGEVLIGQIRSYNSE 80
G V +I +YN E
Sbjct: 1838 GW---LV-------EIVNYNVE 1849
Score = 25.4 bits (55), Expect = 3.0
Identities = 16/90 (17%), Positives = 30/90 (33%), Gaps = 19/90 (21%)
Query: 1 MAKAKALPRDHPESYHYYMWHNFF--SHIDIQ----PENVHILDGNAPDLHAECVQYEKD 54
M L ++ + Y + ++I +N+ ++ G L+ + K
Sbjct: 338 MLSISNLTQEQVQDYVNKTNSHLPAGKQVEISLVNGAKNL-VVSGPPQSLYGLNLTLRK- 395
Query: 55 IKEAGGIHLFVGGEVLIGQIRSYNSESRKI 84
K G + Q R SE RK+
Sbjct: 396 AKAPSG----------LDQSRIPFSE-RKL 414
>3a3j_A PBP5; penicillin binding protein 5, DACA, hydrolase; 2.15A
{Haemophilus influenzae}
Length = 344
Score = 28.3 bits (64), Expect = 0.26
Identities = 9/24 (37%), Positives = 11/24 (45%), Gaps = 1/24 (4%)
Query: 1 MAK-AKALPRDHPESYHYYMWHNF 23
MA + RD PE Y Y +F
Sbjct: 154 MAIIGAHIIRDLPEEYKIYSEKDF 177
>3ky8_A Putative riboflavin biosynthesis protein; structural genomic center
for structural genomics, JCSG, protein structure INI
PSI-2; HET: MSE UNL; 2.12A {Shewanella loihica}
Length = 197
Score = 28.1 bits (63), Expect = 0.30
Identities = 12/65 (18%), Positives = 23/65 (35%), Gaps = 8/65 (12%)
Query: 10 DHPESYHYYMW-HNFFSHIDIQPENVHILDGNAPDLHAECVQYEKDIKEAGGIHLFVGGE 68
D P S ++ + + V ++ G D+ A+ + G L++ G
Sbjct: 83 DWPYSKPVFVLSNTMTEVPQGYEDKVFLVKGKLVDIIAD-------LNAKGFNELYIDGG 135
Query: 69 VLIGQ 73
V I
Sbjct: 136 VTIQN 140
>3mzf_A D-alanyl-D-alanine carboxypeptidase DACA; beta-lactam antibiotic,
penicillin-binding protein, DD- carboxypeptidase,
hydrolase; HET: IM2; 1.50A {Escherichia coli} PDB:
1nzu_A 1nzo_A* 3beb_A* 3bec_A* 3mzd_A* 3mze_A* 1z6f_A*
1nj4_A 1hd8_A 1sdn_A 4drt_A
Length = 363
Score = 27.6 bits (62), Expect = 0.45
Identities = 10/24 (41%), Positives = 11/24 (45%), Gaps = 1/24 (4%)
Query: 1 MAK-AKALPRDHPESYHYYMWHNF 23
MA +AL RD P Y Y F
Sbjct: 165 MALIGQALIRDVPNEYSIYKEKEF 188
>1pmt_A PMGST, GST B1-1, glutathione transferase; glutathione-conjugating,
A putative oxidoreduct; HET: GSH; 2.50A {Proteus
mirabilis} SCOP: a.45.1.1 c.47.1.5 PDB: 2pmt_A*
Length = 203
Score = 27.2 bits (61), Expect = 0.68
Identities = 8/41 (19%), Positives = 15/41 (36%), Gaps = 1/41 (2%)
Query: 3 KAKALPRDHPESYHYYMWHNFFSHIDIQPENVHILDGNAPD 43
+ P E YH W NF + ++ + + P+
Sbjct: 80 RNLIAPPKALERYHQIEWLNFLAS-EVHKGYSPLFSSDTPE 119
>3hun_A Penicillin-binding protein 4; ampicillin, beta-lactamase, serine
type D-Ala, D-Ala-carboxypeptidase, antibiotics; HET:
ZZ7; 2.00A {Staphylococcus aureus} PDB: 3hum_A*
Length = 453
Score = 27.1 bits (60), Expect = 0.73
Identities = 2/24 (8%), Positives = 7/24 (29%), Gaps = 1/24 (4%)
Query: 1 MAK-AKALPRDHPESYHYYMWHNF 23
A + ++ P+ +
Sbjct: 230 YAILDLHVIKETPKILDFTKQLAP 253
>1xp4_A D-alanyl-D-alanine carboxypeptidase; five-stranded antiparallel
beta-sheet, omega-like loop, hydrolase; 2.80A
{Streptococcus pneumoniae R6} SCOP: b.105.1.1 e.3.1.1
Length = 379
Score = 26.9 bits (60), Expect = 0.74
Identities = 4/19 (21%), Positives = 9/19 (47%), Gaps = 1/19 (5%)
Query: 1 MAK-AKALPRDHPESYHYY 18
+A A+ L + +P+
Sbjct: 173 VAIVARNLIKKYPQVLEIT 191
>3ita_A D-alanyl-D-alanine carboxypeptidase DACC; ppenicillin-binding
protein, BP6, DD-carboxypeptidase, peptidoglycan,
ampicillin, acyl-enzyme complex; HET: AIX AIC; 1.80A
{Escherichia coli} PDB: 3it9_A* 3itb_A*
Length = 352
Score = 26.8 bits (60), Expect = 0.80
Identities = 9/19 (47%), Positives = 10/19 (52%), Gaps = 1/19 (5%)
Query: 1 MAK-AKALPRDHPESYHYY 18
MA KAL D PE Y +
Sbjct: 161 MALLGKALIHDVPEEYAIH 179
>1tvf_A PBP4, penicillin binding protein 4; structural genomics, nysgxrc
target, SAV0642, PSI, protein structure initiative;
2.00A {Staphylococcus aureus} SCOP: b.105.1.2 e.3.1.1
Length = 369
Score = 27.0 bits (60), Expect = 0.86
Identities = 2/24 (8%), Positives = 7/24 (29%), Gaps = 1/24 (4%)
Query: 1 MAK-AKALPRDHPESYHYYMWHNF 23
A + ++ P+ +
Sbjct: 194 YAILDLHVIKETPKILDFTKQLAP 217
>2hh6_A BH3980 protein; 10176605, structural genomics, joint center for
STRU genomics, JCSG, protein structure initiative, PSI,
unknown; 2.04A {Bacillus halodurans} SCOP: a.69.4.1
Length = 113
Score = 26.3 bits (58), Expect = 0.94
Identities = 22/88 (25%), Positives = 37/88 (42%), Gaps = 10/88 (11%)
Query: 1 MAKAKALPRDHPESY---HYYMWHNFFSHIDIQPENVHILDGNAPDLHAECVQYEKDIKE 57
A+AKALP+++ +Y YMW D Q + I G DL E K + +
Sbjct: 22 EARAKALPKEYHHAYKAIQKYMW-TSGGPTDWQ-DTKRIFGGIL-DLFEEGAAEGKKVTD 78
Query: 58 AGG--IHLFVGGEVLIGQIRSYNSESRK 83
G + F + L+ +++ + R
Sbjct: 79 LTGEDVAAFC--DELMKDTKTWMDKYRT 104
>1n2a_A Glutathione S-transferase; HET: GTS; 1.90A {Escherichia coli} SCOP:
a.45.1.1 c.47.1.5 PDB: 1a0f_A*
Length = 201
Score = 26.0 bits (58), Expect = 1.8
Identities = 5/38 (13%), Positives = 13/38 (34%), Gaps = 1/38 (2%)
Query: 6 ALPRDHPESYHYYMWHNFFSHIDIQPENVHILDGNAPD 43
P + Y W N+ + ++ + + P+
Sbjct: 83 LAPVNSISRYKTIEWLNYIAT-ELHKGFTPLFRPDTPE 119
>2o4t_A BH3976 protein; LEFT-handed superhelix fold, structural genomics,
joint CENT structural genomics, JCSG, protein structure
initiative; 1.95A {Bacillus halodurans} SCOP: a.69.4.1
Length = 100
Score = 25.2 bits (55), Expect = 2.3
Identities = 5/24 (20%), Positives = 13/24 (54%), Gaps = 3/24 (12%)
Query: 1 MAKAKALPRDHPESY---HYYMWH 21
+++ + LP+D+ Y Y++
Sbjct: 4 VSRVEKLPKDYQIVYKEIQKYLFK 27
>2o3l_A Hypothetical protein; structural genomics, joint center for
structural genomics, J protein structure initiative,
PSI-2, unknown function; HET: MSE; 2.05A {Bacillus
cereus} SCOP: a.69.4.1
Length = 85
Score = 24.8 bits (54), Expect = 2.6
Identities = 9/24 (37%), Positives = 13/24 (54%), Gaps = 3/24 (12%)
Query: 1 MAKAKALPRDHPESY---HYYMWH 21
MA+ ALP D+ + YMW+
Sbjct: 7 MARVAALPEDYQFVFKKIQNYMWN 30
>1zs3_A Lactococcus lactis Mg1363 DPSA; oxidative stress, DNA binding,
lactic acid bacteria, DNA binding protein; 2.70A
{Lactococcus lactis} SCOP: a.25.1.1
Length = 182
Score = 24.8 bits (54), Expect = 4.9
Identities = 11/84 (13%), Positives = 26/84 (30%), Gaps = 12/84 (14%)
Query: 15 YHYYM----WHNFFS--------HIDIQPENVHILDGNAPDLHAECVQYEKDIKEAGGIH 62
Y + + + + + P E ++Y K I E
Sbjct: 48 AGIYAKSPVKCEYLREIAQREVEYFFKISDLLLDENEIVPSTTEEFLKYHKFITEDPKAK 107
Query: 63 LFVGGEVLIGQIRSYNSESRKISR 86
+ ++L I + +++ I+R
Sbjct: 108 YWTDEDLLESFIVDFQAQNMFITR 131
>2lcu_A BC28.1; alpha-barrel, protein binding; NMR {Babesia canis}
Length = 223
Score = 24.5 bits (52), Expect = 5.8
Identities = 8/47 (17%), Positives = 14/47 (29%)
Query: 28 DIQPENVHILDGNAPDLHAECVQYEKDIKEAGGIHLFVGGEVLIGQI 74
+ P + + H E + I E + G +I I
Sbjct: 99 RVSPGDAISMLYVLSITHRELSSLKNKIDEWKKVKASEDGTKVIQNI 145
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.319 0.137 0.420
Gapped
Lambda K H
0.267 0.0758 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 1,468,187
Number of extensions: 75805
Number of successful extensions: 302
Number of sequences better than 10.0: 1
Number of HSP's gapped: 295
Number of HSP's successfully gapped: 44
Length of query: 91
Length of database: 6,701,793
Length adjustment: 58
Effective length of query: 33
Effective length of database: 5,082,375
Effective search space: 167718375
Effective search space used: 167718375
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 51 (23.4 bits)