BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy7060
(160 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9QXB9|DRG2_MOUSE Developmentally-regulated GTP-binding protein 2 OS=Mus musculus
GN=Drg2 PE=1 SV=1
Length = 364
Score = 195 bits (496), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 100/159 (62%), Positives = 110/159 (69%), Gaps = 36/159 (22%)
Query: 1 MLDATKQDVQRGLLEKELESVGIRLNKKKPNIYFKQKKAGGIAFNSTCPLTQVNEKLVQL 60
MLDATK DVQR LLEKELESVGIRLNK KPNIYFK KK G
Sbjct: 146 MLDATKGDVQRSLLEKELESVGIRLNKHKPNIYFKPKKGG-------------------- 185
Query: 61 ILHEYKIFNAEQKKAGGIAFNSTCPLTQVNEKLVQLILHEYKIFNAEVLFREDCNADELI 120
GI+FNST LTQ +EKLVQLILHEYKIFNAEVLFREDC+ D+ I
Sbjct: 186 ----------------GISFNSTVTLTQCSEKLVQLILHEYKIFNAEVLFREDCSPDDFI 229
Query: 121 DVINANRVYLPCIYAYNKIDQISIEEVDRIARQPNSVVV 159
DVI NRVY+PC+Y YNKIDQIS+EEVDR+AR+PNSVV+
Sbjct: 230 DVIVGNRVYMPCLYVYNKIDQISMEEVDRLARKPNSVVI 268
>sp|P55039|DRG2_HUMAN Developmentally-regulated GTP-binding protein 2 OS=Homo sapiens
GN=DRG2 PE=1 SV=1
Length = 364
Score = 195 bits (495), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 100/159 (62%), Positives = 110/159 (69%), Gaps = 36/159 (22%)
Query: 1 MLDATKQDVQRGLLEKELESVGIRLNKKKPNIYFKQKKAGGIAFNSTCPLTQVNEKLVQL 60
MLDATK +VQR LLEKELESVGIRLNK KPNIYFK KK G
Sbjct: 146 MLDATKGEVQRSLLEKELESVGIRLNKHKPNIYFKPKKGG-------------------- 185
Query: 61 ILHEYKIFNAEQKKAGGIAFNSTCPLTQVNEKLVQLILHEYKIFNAEVLFREDCNADELI 120
GI+FNST LTQ +EKLVQLILHEYKIFNAEVLFREDC+ DE I
Sbjct: 186 ----------------GISFNSTVTLTQCSEKLVQLILHEYKIFNAEVLFREDCSPDEFI 229
Query: 121 DVINANRVYLPCIYAYNKIDQISIEEVDRIARQPNSVVV 159
DVI NRVY+PC+Y YNKIDQIS+EEVDR+AR+PNSVV+
Sbjct: 230 DVIVGNRVYMPCLYVYNKIDQISMEEVDRLARKPNSVVI 268
>sp|Q58D56|DRG2_BOVIN Developmentally-regulated GTP-binding protein 2 OS=Bos taurus
GN=DRG2 PE=2 SV=1
Length = 364
Score = 193 bits (490), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 99/159 (62%), Positives = 110/159 (69%), Gaps = 36/159 (22%)
Query: 1 MLDATKQDVQRGLLEKELESVGIRLNKKKPNIYFKQKKAGGIAFNSTCPLTQVNEKLVQL 60
MLDATK +VQR LLEKELESVGIRLNK KPNIYFK KK G
Sbjct: 146 MLDATKGEVQRSLLEKELESVGIRLNKHKPNIYFKPKKGG-------------------- 185
Query: 61 ILHEYKIFNAEQKKAGGIAFNSTCPLTQVNEKLVQLILHEYKIFNAEVLFREDCNADELI 120
GI+FNST LTQ +EKLVQLILHEYKIFNAEVLFREDC+ DE I
Sbjct: 186 ----------------GISFNSTVTLTQCSEKLVQLILHEYKIFNAEVLFREDCSPDEFI 229
Query: 121 DVINANRVYLPCIYAYNKIDQISIEEVDRIARQPNSVVV 159
DVI NRVY+PC+Y YNKIDQIS+EEVDR+AR+P+SVV+
Sbjct: 230 DVIVGNRVYMPCLYVYNKIDQISMEEVDRLARKPDSVVI 268
>sp|P34280|YKK3_CAEEL Uncharacterized GTP-binding protein C02F5.3 OS=Caenorhabditis
elegans GN=C02F5.3 PE=3 SV=2
Length = 366
Score = 169 bits (429), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 84/159 (52%), Positives = 100/159 (62%), Gaps = 36/159 (22%)
Query: 1 MLDATKQDVQRGLLEKELESVGIRLNKKKPNIYFKQKKAGGIAFNSTCPLTQVNEKLVQL 60
MLDA K D Q+ LLE+ELE+VGIRLNKK PNIY KQKK
Sbjct: 146 MLDAGKSDQQKMLLERELEAVGIRLNKKPPNIYVKQKKV--------------------- 184
Query: 61 ILHEYKIFNAEQKKAGGIAFNSTCPLTQVNEKLVQLILHEYKIFNAEVLFREDCNADELI 120
GG+ F +T PLT NEKL+ +LHEYKIFNA+V+FREDC DE I
Sbjct: 185 ---------------GGVKFTNTVPLTHCNEKLIMTVLHEYKIFNADVIFREDCTVDEFI 229
Query: 121 DVINANRVYLPCIYAYNKIDQISIEEVDRIARQPNSVVV 159
DVI NRVY+ C+Y YNK+DQISIEE+DR+AR P+ VV+
Sbjct: 230 DVIQGNRVYMTCLYVYNKVDQISIEEIDRLARMPHHVVI 268
>sp|Q9CAI1|DRG2_ARATH Developmentally regulated G-protein 2 OS=Arabidopsis thaliana
GN=DRG2 PE=2 SV=1
Length = 399
Score = 153 bits (386), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 76/159 (47%), Positives = 99/159 (62%), Gaps = 36/159 (22%)
Query: 1 MLDATKQDVQRGLLEKELESVGIRLNKKKPNIYFKQKKAGGIAFNSTCPLTQVNEKLVQL 60
+LDA+K + R +L KELE+VG+RLNK+ P IYFK+KK G
Sbjct: 146 VLDASKSEGHRQILTKELEAVGLRLNKRPPQIYFKKKKTG-------------------- 185
Query: 61 ILHEYKIFNAEQKKAGGIAFNSTCPLTQVNEKLVQLILHEYKIFNAEVLFREDCNADELI 120
GI+FN+T PLT+++EKL ILHEYKI NAEVLFRED D+ I
Sbjct: 186 ----------------GISFNTTTPLTRIDEKLCYQILHEYKIHNAEVLFREDATVDDFI 229
Query: 121 DVINANRVYLPCIYAYNKIDQISIEEVDRIARQPNSVVV 159
DV+ NR Y+ C+Y YNKID + I++VDR+ARQPNS+V+
Sbjct: 230 DVVEGNRKYIKCVYVYNKIDVVGIDDVDRLARQPNSIVI 268
>sp|Q9LQK0|DRG1_ARATH Developmentally regulated G-protein 1 OS=Arabidopsis thaliana
GN=DRG1 PE=1 SV=1
Length = 399
Score = 149 bits (377), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 75/159 (47%), Positives = 97/159 (61%), Gaps = 36/159 (22%)
Query: 1 MLDATKQDVQRGLLEKELESVGIRLNKKKPNIYFKQKKAGGIAFNSTCPLTQVNEKLVQL 60
+LDA+K + R +L KELE+VG+RLNK P IYFK+KK G
Sbjct: 146 VLDASKSEGHRQILTKELEAVGLRLNKTPPQIYFKKKKTG-------------------- 185
Query: 61 ILHEYKIFNAEQKKAGGIAFNSTCPLTQVNEKLVQLILHEYKIFNAEVLFREDCNADELI 120
GI+FN+T PLT ++EKL ILHEYKI NAEVLFRE+ D+ I
Sbjct: 186 ----------------GISFNTTAPLTHIDEKLCYQILHEYKIHNAEVLFRENATVDDFI 229
Query: 121 DVINANRVYLPCIYAYNKIDQISIEEVDRIARQPNSVVV 159
DVI NR Y+ C+Y YNKID + I++VDR++RQPNS+V+
Sbjct: 230 DVIEGNRKYIKCVYVYNKIDVVGIDDVDRLSRQPNSIVI 268
>sp|Q54WT4|DRG2_DICDI Developmentally-regulated GTP-binding protein 2 homolog
OS=Dictyostelium discoideum GN=drg2 PE=3 SV=1
Length = 364
Score = 136 bits (343), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 70/159 (44%), Positives = 94/159 (59%), Gaps = 36/159 (22%)
Query: 1 MLDATKQDVQRGLLEKELESVGIRLNKKKPNIYFKQKKAGGIAFNSTCPLTQVNEKLVQL 60
MLDA K ++Q+ LL++ELES+GIRLN + PNIYFK K AG
Sbjct: 146 MLDANKGEIQKRLLQEELESIGIRLNSQPPNIYFKLKSAG-------------------- 185
Query: 61 ILHEYKIFNAEQKKAGGIAFNSTCPLTQVNEKLVQLILHEYKIFNAEVLFREDCNADELI 120
G+ +T LT++ EKL + ILHEYKIFN +++ R D DELI
Sbjct: 186 ----------------GVNLTATQTLTKITEKLAKSILHEYKIFNCDLVIRCDPTVDELI 229
Query: 121 DVINANRVYLPCIYAYNKIDQISIEEVDRIARQPNSVVV 159
D I R Y+ C+Y YNK+D +S+E+VDR++RQPNSVV+
Sbjct: 230 DAIEGRRSYIRCLYVYNKMDHMSMEDVDRLSRQPNSVVI 268
>sp|P53295|RBG2_YEAST Ribosome-interacting GTPase 2 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RBG2 PE=1 SV=1
Length = 368
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 72/161 (44%), Positives = 99/161 (61%), Gaps = 37/161 (22%)
Query: 1 MLDATKQDVQRGLLEKELESVGIRLNKKKPNIYFKQKKAGGIAFNSTCPLTQVNEKLVQL 60
+LDATK + QR LEKELE+VGIRLNK+KPNIY+K+K+ GG+ T P
Sbjct: 147 VLDATKSEHQRASLEKELENVGIRLNKEKPNIYYKKKETGGVKVTFTSP----------- 195
Query: 61 ILHEYKIFNAEQKKAGGIAFNSTCPLTQVNEKLVQLILHEYKIFNAEVLFRED-CNADEL 119
P T + E+ +++IL +Y+I NAEVL R+D C D+
Sbjct: 196 ------------------------PKTNLTEQAIKMILRDYRIHNAEVLVRDDQCTIDDF 231
Query: 120 IDVINA-NRVYLPCIYAYNKIDQISIEEVDRIARQPNSVVV 159
IDVIN +R Y+ C+Y YNKID +S+EEVD++AR+PN+VV+
Sbjct: 232 IDVINEQHRNYVKCLYVYNKIDAVSLEEVDKLAREPNTVVM 272
>sp|P32235|GTP1_SCHPO GTP-binding protein 1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=gtp1 PE=3 SV=2
Length = 364
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/159 (42%), Positives = 88/159 (55%), Gaps = 36/159 (22%)
Query: 1 MLDATKQDVQRGLLEKELESVGIRLNKKKPNIYFKQKKAGGIAFNSTCPLTQVNEKLVQL 60
+LDATK QR +E ELE VGIRLN++ PN+ KK G
Sbjct: 145 VLDATKAADQREKIEYELEQVGIRLNRQPPNVTLTIKKNG-------------------- 184
Query: 61 ILHEYKIFNAEQKKAGGIAFNSTCPLTQVNEKLVQLILHEYKIFNAEVLFREDCNADELI 120
GI FN T PLT ++ K+ ILHEY+I NA++L RED D+ I
Sbjct: 185 ----------------GIKFNHTVPLTHMDYKMAYNILHEYRIHNADILIREDITVDDFI 228
Query: 121 DVINANRVYLPCIYAYNKIDQISIEEVDRIARQPNSVVV 159
D++ NR Y+ C+Y Y+KID +S+EEVDR+AR P SVV+
Sbjct: 229 DLVMGNRRYINCLYCYSKIDAVSLEEVDRLARLPKSVVI 267
>sp|P32234|128UP_DROME GTP-binding protein 128up OS=Drosophila melanogaster GN=128up PE=2
SV=2
Length = 368
Score = 119 bits (298), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 67/159 (42%), Positives = 86/159 (54%), Gaps = 36/159 (22%)
Query: 1 MLDATKQDVQRGLLEKELESVGIRLNKKKPNIYFKQKKAGGIAFNSTCPLTQVNEKLVQL 60
+LD K + LLE ELE GIRLNKK PNIY+K+K GG
Sbjct: 148 VLDCLKPLGHKKLLEHELEGFGIRLNKKPPNIYYKRKDKGG------------------- 188
Query: 61 ILHEYKIFNAEQKKAGGIAFNSTCPLTQVNEKLVQLILHEYKIFNAEVLFREDCNADELI 120
I NS P ++++ LV+ IL EYKI NA++ R D +D+LI
Sbjct: 189 -----------------INLNSMVPQSELDTDLVKTILSEYKIHNADITLRYDATSDDLI 231
Query: 121 DVINANRVYLPCIYAYNKIDQISIEEVDRIARQPNSVVV 159
DVI NR+Y+PCIY NKIDQISIEE+D I + P+ V +
Sbjct: 232 DVIEGNRIYIPCIYLLNKIDQISIEELDVIYKIPHCVPI 270
>sp|Q9Y295|DRG1_HUMAN Developmentally-regulated GTP-binding protein 1 OS=Homo sapiens
GN=DRG1 PE=1 SV=1
Length = 367
Score = 116 bits (291), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 65/159 (40%), Positives = 85/159 (53%), Gaps = 36/159 (22%)
Query: 1 MLDATKQDVQRGLLEKELESVGIRLNKKKPNIYFKQKKAGGIAFNSTCPLTQVNEKLVQL 60
+LD K + ++E ELE GIRLN K PNI FK+K GG
Sbjct: 148 VLDVLKPLGHKKIIENELEGFGIRLNSKPPNIGFKKKDKGG------------------- 188
Query: 61 ILHEYKIFNAEQKKAGGIAFNSTCPLTQVNEKLVQLILHEYKIFNAEVLFREDCNADELI 120
I +TCP ++++ + V+ IL EYKI NA+V R D AD+LI
Sbjct: 189 -----------------INLTATCPQSELDAETVKSILAEYKIHNADVTLRSDATADDLI 231
Query: 121 DVINANRVYLPCIYAYNKIDQISIEEVDRIARQPNSVVV 159
DV+ NRVY+PCIY NKIDQISIEE+D I + P+ V +
Sbjct: 232 DVVEGNRVYIPCIYVLNKIDQISIEELDIIYKVPHCVPI 270
>sp|Q3MHP5|DRG1_BOVIN Developmentally-regulated GTP-binding protein 1 OS=Bos taurus
GN=DRG1 PE=2 SV=1
Length = 367
Score = 116 bits (291), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 65/159 (40%), Positives = 85/159 (53%), Gaps = 36/159 (22%)
Query: 1 MLDATKQDVQRGLLEKELESVGIRLNKKKPNIYFKQKKAGGIAFNSTCPLTQVNEKLVQL 60
+LD K + ++E ELE GIRLN K PNI FK+K GG
Sbjct: 148 VLDVLKPLGHKKIIENELEGFGIRLNSKPPNIGFKKKDKGG------------------- 188
Query: 61 ILHEYKIFNAEQKKAGGIAFNSTCPLTQVNEKLVQLILHEYKIFNAEVLFREDCNADELI 120
I +TCP ++++ + V+ IL EYKI NA+V R D AD+LI
Sbjct: 189 -----------------INLTATCPQSELDAETVKSILAEYKIHNADVTLRSDATADDLI 231
Query: 121 DVINANRVYLPCIYAYNKIDQISIEEVDRIARQPNSVVV 159
DV+ NRVY+PCIY NKIDQISIEE+D I + P+ V +
Sbjct: 232 DVVEGNRVYIPCIYVLNKIDQISIEELDIIYKVPHCVPI 270
>sp|P32233|DRG1_MOUSE Developmentally-regulated GTP-binding protein 1 OS=Mus musculus
GN=Drg1 PE=1 SV=1
Length = 367
Score = 116 bits (291), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 65/159 (40%), Positives = 85/159 (53%), Gaps = 36/159 (22%)
Query: 1 MLDATKQDVQRGLLEKELESVGIRLNKKKPNIYFKQKKAGGIAFNSTCPLTQVNEKLVQL 60
+LD K + ++E ELE GIRLN K PNI FK+K GG
Sbjct: 148 VLDVLKPLGHKKIIENELEGFGIRLNSKPPNIGFKKKDKGG------------------- 188
Query: 61 ILHEYKIFNAEQKKAGGIAFNSTCPLTQVNEKLVQLILHEYKIFNAEVLFREDCNADELI 120
I +TCP ++++ + V+ IL EYKI NA+V R D AD+LI
Sbjct: 189 -----------------INLTATCPQSELDAETVKSILAEYKIHNADVTLRSDATADDLI 231
Query: 121 DVINANRVYLPCIYAYNKIDQISIEEVDRIARQPNSVVV 159
DV+ NRVY+PCIY NKIDQISIEE+D I + P+ V +
Sbjct: 232 DVVEGNRVYIPCIYVLNKIDQISIEELDIIYKVPHCVPI 270
>sp|Q54HP3|DRG1_DICDI Developmentally-regulated GTP-binding protein 1 homolog
OS=Dictyostelium discoideum GN=drg1 PE=3 SV=1
Length = 370
Score = 112 bits (280), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/159 (40%), Positives = 88/159 (55%), Gaps = 34/159 (21%)
Query: 1 MLDATKQDVQRGLLEKELESVGIRLNKKKPNIYFKQKKAGGIAFNSTCPLTQVNEKLVQL 60
+LDA K V + ++E+EL+ GIRLNK+ P I FK+K+ GGI F+ T VN
Sbjct: 148 VLDAMKPLVHKKIIERELDGFGIRLNKQPPPITFKKKEKGGINFSHT---PNVNP----- 199
Query: 61 ILHEYKIFNAEQKKAGGIAFNSTCPLTQVNEKLVQLILHEYKIFNAEVLFREDCNADELI 120
TQ++ + V+ I EYKI NA+V+ R +C DE I
Sbjct: 200 --------------------------TQLDSETVKAICAEYKIHNADVILRGNCTVDEFI 233
Query: 121 DVINANRVYLPCIYAYNKIDQISIEEVDRIARQPNSVVV 159
DVI NR+Y+PCIY NKID ISIEE+D + + P+ V +
Sbjct: 234 DVIEGNRIYVPCIYVLNKIDAISIEELDLLDKIPHYVPI 272
>sp|P43690|DRG1_XENLA Developmentally-regulated GTP-binding protein 1 OS=Xenopus laevis
GN=drg1 PE=2 SV=1
Length = 367
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/159 (39%), Positives = 84/159 (52%), Gaps = 36/159 (22%)
Query: 1 MLDATKQDVQRGLLEKELESVGIRLNKKKPNIYFKQKKAGGIAFNSTCPLTQVNEKLVQL 60
+LD K + ++E ELE GIRLNK+ PNI FK+K GG
Sbjct: 148 VLDVLKPLGHKKIIENELEGFGIRLNKQPPNIGFKKKDKGG------------------- 188
Query: 61 ILHEYKIFNAEQKKAGGIAFNSTCPLTQVNEKLVQLILHEYKIFNAEVLFREDCNADELI 120
I +TC ++++ V+ IL EYKI NA++ R D AD+LI
Sbjct: 189 -----------------INLTATCAQSELDNDTVKSILAEYKIHNADITLRSDATADDLI 231
Query: 121 DVINANRVYLPCIYAYNKIDQISIEEVDRIARQPNSVVV 159
DV+ NRVY+PCIY NKIDQISIEE+D I + P+ V +
Sbjct: 232 DVVEGNRVYIPCIYVLNKIDQISIEELDIIYKVPHCVPI 270
>sp|Q9UT21|YFY7_SCHPO Uncharacterized GTP-binding protein C9.07c OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPAC9.07c PE=2 SV=1
Length = 366
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 84/159 (52%), Gaps = 36/159 (22%)
Query: 1 MLDATKQDVQRGLLEKELESVGIRLNKKKPNIYFKQKKAGGIAFNSTCPLTQVNEKLVQL 60
+LD K + ++E+ELE GIRLNK+ PNI FK+K+ GG
Sbjct: 147 VLDVLKPMSHKRIIEEELEGFGIRLNKEPPNIVFKKKERGG------------------- 187
Query: 61 ILHEYKIFNAEQKKAGGIAFNSTCPLTQVNEKLVQLILHEYKIFNAEVLFREDCNADELI 120
I +T PLT ++ ++ + EY++ +A++ FR D D+LI
Sbjct: 188 -----------------INITNTVPLTHIDLDEIRAVCSEYRVNSADIAFRCDATIDDLI 230
Query: 121 DVINANRVYLPCIYAYNKIDQISIEEVDRIARQPNSVVV 159
DV+ NRVY+P +Y NKID ISIEE+D I R PN+V +
Sbjct: 231 DVLEGNRVYIPALYVLNKIDSISIEELDLIDRIPNAVPI 269
>sp|P39729|RBG1_YEAST Ribosome-interacting GTPase 1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RBG1 PE=1 SV=1
Length = 369
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/160 (35%), Positives = 84/160 (52%), Gaps = 37/160 (23%)
Query: 1 MLDATKQDVQRGLLEKELESVGIRLNKKKPNIYFKQKKAGGIAFNSTCPLTQVNEKLVQL 60
+LD K + ++EKELE VGIRLNK P+I K+K+ G
Sbjct: 149 ILDVNKPLHHKQIIEKELEGVGIRLNKTPPDILIKKKEKG-------------------- 188
Query: 61 ILHEYKIFNAEQKKAGGIAFNSTCPLTQVNEKLVQLILHEYKIFNAEVLFREDCNADELI 120
GI+ +T PLT + ++ ++ EY+I +AE+ FR D D+LI
Sbjct: 189 ----------------GISITNTVPLTHLGNDEIRAVMSEYRINSAEIAFRCDATVDDLI 232
Query: 121 DVINAN-RVYLPCIYAYNKIDQISIEEVDRIARQPNSVVV 159
DV+ A+ R Y+P IY NKID +SIEE++ + R PN+V +
Sbjct: 233 DVLEASSRRYMPAIYVLNKIDSLSIEELELLYRIPNAVPI 272
>sp|Q58722|Y1326_METJA Uncharacterized GTP-binding protein MJ1326 OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=MJ1326 PE=3 SV=1
Length = 391
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 66/128 (51%), Gaps = 36/128 (28%)
Query: 13 LLEKELESVGIRLNKKKPNIYFKQKKAGGIAFNSTCPLTQVNEKLVQLILHEYKIFNAEQ 72
+LEKEL +VGIRL++ P++ K K+ GG
Sbjct: 179 VLEKELYNVGIRLDQTPPDVKIKVKERGG------------------------------- 207
Query: 73 KKAGGIAFNSTCPLTQVNEKLVQLILHEYKIFNAEVLFREDCNADELIDVINANRVYLPC 132
I +ST PLT ++E ++ IL+EY+I NA+V+ RED ++ IDV+ NRVY+P
Sbjct: 208 -----INVSSTVPLTHIDEDTIEAILNEYRIHNADVVIREDITLEQFIDVVAGNRVYIPS 262
Query: 133 IYAYNKID 140
+ NKID
Sbjct: 263 LVVVNKID 270
>sp|P17103|Y1111_HALSA Uncharacterized GTP-binding protein VNG_1111G OS=Halobacterium
salinarum (strain ATCC 700922 / JCM 11081 / NRC-1)
GN=VNG_1111G PE=3 SV=1
Length = 370
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 54/129 (41%), Gaps = 37/129 (28%)
Query: 14 LEKELESVGIRLNKKKPNIYFKQKKAGGIAFNSTCPLTQVNEKLVQLILHEYKIFNAEQK 73
L +EL +V IR++ + P++ ++K GI N++ L
Sbjct: 157 LAEELYNVNIRVDAEPPSVTVRRKGKDGIDVNTSGEL----------------------- 193
Query: 74 KAGGIAFNSTCPLTQVNEKLVQLILHEYKIFNAEVLFREDCNADELIDVINANRVYLPCI 133
+++ V+ IL E NA V R + + D LID + NRVY+P +
Sbjct: 194 --------------ELDSDTVKGILRERGFINANVTIRGNPSVDRLIDGVMDNRVYMPSL 239
Query: 134 YAYNKIDQI 142
NK+D I
Sbjct: 240 VTVNKVDLI 248
>sp|Q8A9J0|UXAB_BACTN Altronate oxidoreductase OS=Bacteroides thetaiotaomicron (strain
ATCC 29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482)
GN=uxaB PE=3 SV=1
Length = 479
Score = 37.7 bits (86), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 40/86 (46%), Gaps = 13/86 (15%)
Query: 40 GGIAFNSTC-----PLTQVNEKLVQLILHEYKIFNAEQKKAGGIAFNSTCPLTQVN-EKL 93
GIAF+ TC P + KL QL+ H +K FN ++ K G I F C L +N KL
Sbjct: 123 AGIAFDPTCKLEDAPASSYPGKLTQLLYHRFKTFNGDKTK-GLIIF--PCELIFLNGHKL 179
Query: 94 VQLILHEYKIFNA----EVLFREDCN 115
+ I ++N + F E C
Sbjct: 180 KETIYQYIDLWNLGNEFKTWFEEACG 205
Score = 35.4 bits (80), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 6/64 (9%)
Query: 49 PLTQVNEKLVQLILHEYKIFNAEQKKAGGIAFNSTC-----PLTQVNEKLVQLILHEYKI 103
P TQ N++ ++L F GIAF+ TC P + KL QL+ H +K
Sbjct: 97 PYTQ-NDEFMKLAEQPEMRFVISNTTEAGIAFDPTCKLEDAPASSYPGKLTQLLYHRFKT 155
Query: 104 FNAE 107
FN +
Sbjct: 156 FNGD 159
>sp|A6L4U5|UXAB_BACV8 Altronate oxidoreductase OS=Bacteroides vulgatus (strain ATCC 8482
/ DSM 1447 / NCTC 11154) GN=uxaB PE=3 SV=1
Length = 479
Score = 37.0 bits (84), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 8/67 (11%)
Query: 40 GGIAFNSTC-----PLTQVNEKLVQLILHEYKIFNAEQKKAGGIAFNSTCPLTQVNEKLV 94
GIAF+ C P + KL QL+ H YK FN ++ K G I F C L +N +
Sbjct: 123 AGIAFDPACKLDDAPASSYPGKLTQLLYHRYKTFNGDKSK-GLIIF--PCELIFLNGHKL 179
Query: 95 QLILHEY 101
+ +++Y
Sbjct: 180 KETIYQY 186
Score = 33.5 bits (75), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 6/64 (9%)
Query: 49 PLTQVNEKLVQLILHEYKIFNAEQKKAGGIAFNSTC-----PLTQVNEKLVQLILHEYKI 103
P +Q N++ ++L F GIAF+ C P + KL QL+ H YK
Sbjct: 97 PYSQ-NDEFMKLAEQPEMRFVISNTTEAGIAFDPACKLDDAPASSYPGKLTQLLYHRYKT 155
Query: 104 FNAE 107
FN +
Sbjct: 156 FNGD 159
>sp|Q09245|YP97_CAEEL Uncharacterized protein C28H8.7 OS=Caenorhabditis elegans
GN=C28H8.7 PE=4 SV=1
Length = 283
Score = 32.0 bits (71), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 16/70 (22%)
Query: 14 LEKELESVGIRLNKKKPNIYF---------KQKKAGGIAFNSTCPLTQVNEKLVQLI--- 61
L +L++ G LN NIY+ Q ++ GI ST TQVN K++ LI
Sbjct: 141 LPTDLKTYGTHLNSS--NIYWDYGSLANYLNQSESAGIGHFSTYLKTQVNHKVIDLISIK 198
Query: 62 --LHEYKIFN 69
++ YKIF+
Sbjct: 199 EEVNNYKIFH 208
>sp|Q71SP7|FAS_BOVIN Fatty acid synthase OS=Bos taurus GN=FASN PE=2 SV=1
Length = 2513
Score = 31.2 bits (69), Expect = 2.6, Method: Composition-based stats.
Identities = 22/87 (25%), Positives = 42/87 (48%), Gaps = 7/87 (8%)
Query: 28 KKPNIYFKQKKAGGIAFNSTCPLTQVNEKLVQLILHEYKIFNAEQKKAGGIAFNSTCPLT 87
K+ ++ K+ + GG+AF+S + + ++L + K E + +++ P T
Sbjct: 666 KQEGVFAKEVRTGGMAFHS-----YFMDAIAPMLLQQLKKVIREPQPRSPRWLSTSIPET 720
Query: 88 QVNEKLVQLILHEYKIFN--AEVLFRE 112
Q E L + EY + N + VLF+E
Sbjct: 721 QWQESLARTFSAEYNVNNLVSPVLFQE 747
>sp|P36848|SPIKE_ADE31 Fiber protein OS=Human adenovirus A serotype 31 GN=L5 PE=2 SV=1
Length = 556
Score = 30.8 bits (68), Expect = 3.9, Method: Composition-based stats.
Identities = 23/80 (28%), Positives = 31/80 (38%), Gaps = 9/80 (11%)
Query: 23 IRLNKKKP----NIYFKQKKAGGIAFNSTCPLTQVNEKLVQLILHEYKIFNAEQK----- 73
+ LN K P N K GI NS LT N K+++ + H +
Sbjct: 53 LSLNYKDPIVTENGSLTLKLGNGIKLNSQGQLTTTNTKVLEPLPHTSQGLTLSWSAPLSV 112
Query: 74 KAGGIAFNSTCPLTQVNEKL 93
KA + N+ P T NE L
Sbjct: 113 KASALTLNTMAPFTTTNESL 132
>sp|P49327|FAS_HUMAN Fatty acid synthase OS=Homo sapiens GN=FASN PE=1 SV=3
Length = 2511
Score = 30.0 bits (66), Expect = 6.7, Method: Composition-based stats.
Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 7/87 (8%)
Query: 28 KKPNIYFKQKKAGGIAFNSTCPLTQVNEKLVQLILHEYKIFNAEQKKAGGIAFNSTCPLT 87
+K ++ K+ + GG+AF+S E + +L E K E K +++ P
Sbjct: 666 RKEGVFAKEVRTGGMAFHS-----YFMEAIAPPLLQELKKVIREPKPRSARWLSTSIPEA 720
Query: 88 QVNEKLVQLILHEYKIFN--AEVLFRE 112
Q + L + EY + N + VLF+E
Sbjct: 721 QWHSSLARTSSAEYNVNNLVSPVLFQE 747
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.137 0.385
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,116,024
Number of Sequences: 539616
Number of extensions: 2047767
Number of successful extensions: 4928
Number of sequences better than 100.0: 28
Number of HSP's better than 100.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 4882
Number of HSP's gapped (non-prelim): 49
length of query: 160
length of database: 191,569,459
effective HSP length: 108
effective length of query: 52
effective length of database: 133,290,931
effective search space: 6931128412
effective search space used: 6931128412
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 56 (26.2 bits)