BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy7061
(65 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q803V5|LST8_DANRE Target of rapamycin complex subunit lst8 OS=Danio rerio GN=mlst8
PE=2 SV=1
Length = 326
Score = 74.3 bits (181), Expect = 2e-13, Method: Composition-based stats.
Identities = 35/72 (48%), Positives = 48/72 (66%), Gaps = 7/72 (9%)
Query: 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVREL-------GTANQRWVWD 53
+ AH+ Y L C FSPD LLAT SADQT +IW T +FSL+ EL G ++ W+WD
Sbjct: 216 IPAHKRYSLRCKFSPDSTLLATCSADQTCKIWRTSNFSLMTELSIKSNNPGETSRGWMWD 275
Query: 54 AAFTLDSKFLLT 65
AF+ DS++++T
Sbjct: 276 CAFSGDSQYIVT 287
Score = 32.0 bits (71), Expect = 1.2, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 5 RAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAF 56
R + C FS D + + T S+D AR+W E + RE + +Q+ V AF
Sbjct: 270 RGWMWDCAFSGDSQYIVTASSDNLARLWCVETGEIKREY-SGHQKAVVCLAF 320
>sp|Q54D08|LST8_DICDI Protein LST8 homolog OS=Dictyostelium discoideum GN=lst8 PE=1 SV=1
Length = 304
Score = 72.8 bits (177), Expect = 5e-13, Method: Composition-based stats.
Identities = 35/65 (53%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDS 60
+ AH A L +FSPD +LLAT SAD T +IWNT+ F++V+ L +QRWVWD AF+ DS
Sbjct: 203 IEAHNAPILKTLFSPDTKLLATCSADHTVKIWNTKKFNVVQTL-NGHQRWVWDCAFSNDS 261
Query: 61 KFLLT 65
+L+T
Sbjct: 262 AYLVT 266
>sp|Q9W328|LST8_DROME Protein LST8 homolog OS=Drosophila melanogaster GN=CG3004 PE=2 SV=2
Length = 313
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 39/65 (60%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDS 60
+ AH Y L C FSPD RLL TTS D T IW T+DFS REL N WVWDAAF+ DS
Sbjct: 210 IPAHSRYILRCKFSPDSRLLLTTSGDGTVCIWKTDDFSKWRELCIENY-WVWDAAFSADS 268
Query: 61 KFLLT 65
K+L T
Sbjct: 269 KWLFT 273
>sp|Q29HG9|LST8_DROPS Protein LST8 homolog OS=Drosophila pseudoobscura pseudoobscura
GN=GA15597 PE=3 SV=1
Length = 315
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/65 (60%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDS 60
+ AH Y L C FSPD RLL TTS D TA +W T DFS REL N WVWDAAF+ DS
Sbjct: 209 IQAHTRYILRCKFSPDSRLLLTTSGDGTACLWKTSDFSKWRELCIENY-WVWDAAFSADS 267
Query: 61 KFLLT 65
K+L T
Sbjct: 268 KWLFT 272
>sp|Q9BVC4|LST8_HUMAN Target of rapamycin complex subunit LST8 OS=Homo sapiens GN=MLST8
PE=1 SV=1
Length = 326
Score = 70.5 bits (171), Expect = 3e-12, Method: Composition-based stats.
Identities = 34/72 (47%), Positives = 47/72 (65%), Gaps = 7/72 (9%)
Query: 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVREL-------GTANQRWVWD 53
+ AH Y L C FSPD LLAT SADQT +IW T +FSL+ EL G +++ W+W
Sbjct: 216 IPAHTRYALQCRFSPDSTLLATCSADQTCKIWRTSNFSLMTELSIKSGNPGESSRGWMWG 275
Query: 54 AAFTLDSKFLLT 65
AF+ DS++++T
Sbjct: 276 CAFSGDSQYIVT 287
Score = 33.1 bits (74), Expect = 0.53, Method: Composition-based stats.
Identities = 15/42 (35%), Positives = 22/42 (52%)
Query: 3 AHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELG 44
+ R + C FS D + + T S+D AR+W E + RE G
Sbjct: 268 SSRGWMWGCAFSGDSQYIVTASSDNLARLWCVETGEIKREYG 309
>sp|Q17QU5|LST8_BOVIN Target of rapamycin complex subunit LST8 OS=Bos taurus GN=MLST8
PE=2 SV=1
Length = 326
Score = 70.5 bits (171), Expect = 3e-12, Method: Composition-based stats.
Identities = 34/72 (47%), Positives = 47/72 (65%), Gaps = 7/72 (9%)
Query: 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVREL-------GTANQRWVWD 53
+ AH Y L C FSPD LLAT SADQT +IW T +FSL+ EL G +++ W+W
Sbjct: 216 IPAHTRYALQCRFSPDSTLLATCSADQTCKIWRTSNFSLMTELSIKSSNPGESSRGWMWG 275
Query: 54 AAFTLDSKFLLT 65
AF+ DS++++T
Sbjct: 276 CAFSGDSQYIVT 287
Score = 33.1 bits (74), Expect = 0.54, Method: Composition-based stats.
Identities = 15/42 (35%), Positives = 22/42 (52%)
Query: 3 AHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELG 44
+ R + C FS D + + T S+D AR+W E + RE G
Sbjct: 268 SSRGWMWGCAFSGDSQYIVTASSDNLARLWCVETGEIKREYG 309
>sp|Q9DCJ1|LST8_MOUSE Target of rapamycin complex subunit LST8 OS=Mus musculus GN=Mlst8
PE=1 SV=1
Length = 326
Score = 70.5 bits (171), Expect = 3e-12, Method: Composition-based stats.
Identities = 34/72 (47%), Positives = 47/72 (65%), Gaps = 7/72 (9%)
Query: 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVREL-------GTANQRWVWD 53
+ AH Y L C FSPD LLAT SADQT +IW T +FSL+ EL G +++ W+W
Sbjct: 216 IPAHTRYALQCRFSPDSTLLATCSADQTCKIWRTSNFSLMTELSIKSSNPGESSRGWMWG 275
Query: 54 AAFTLDSKFLLT 65
AF+ DS++++T
Sbjct: 276 CAFSGDSQYIVT 287
Score = 33.1 bits (74), Expect = 0.58, Method: Composition-based stats.
Identities = 15/42 (35%), Positives = 22/42 (52%)
Query: 3 AHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELG 44
+ R + C FS D + + T S+D AR+W E + RE G
Sbjct: 268 SSRGWMWGCAFSGDSQYIVTASSDNLARLWCVETGEIKREYG 309
>sp|Q5I0B4|LST8_XENTR Target of rapamycin complex subunit lst8 OS=Xenopus tropicalis
GN=mlst8 PE=2 SV=1
Length = 326
Score = 70.1 bits (170), Expect = 4e-12, Method: Composition-based stats.
Identities = 34/72 (47%), Positives = 47/72 (65%), Gaps = 7/72 (9%)
Query: 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVREL-------GTANQRWVWD 53
+ AH+ L C FSPD LLAT SADQT +IW T +FSL+ EL G ++ W+WD
Sbjct: 216 IPAHKRCALKCKFSPDSTLLATCSADQTCKIWRTSNFSLMTELSIKSNNPGETSRGWMWD 275
Query: 54 AAFTLDSKFLLT 65
AF+ DS++++T
Sbjct: 276 CAFSGDSQYIVT 287
Score = 31.6 bits (70), Expect = 1.4, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 5 RAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAF 56
R + C FS D + + T S+D AR+W E + RE + +Q+ V AF
Sbjct: 270 RGWMWDCAFSGDSQYIVTASSDNLARLWCVETGEIKREY-SGHQKAVVCLAF 320
>sp|Q6PA72|LST8_XENLA Target of rapamycin complex subunit lst8 OS=Xenopus laevis GN=mlst8
PE=2 SV=1
Length = 326
Score = 70.1 bits (170), Expect = 4e-12, Method: Composition-based stats.
Identities = 34/72 (47%), Positives = 47/72 (65%), Gaps = 7/72 (9%)
Query: 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVREL-------GTANQRWVWD 53
+ AH+ L C FSPD LLAT SADQT +IW T +FSL+ EL G ++ W+WD
Sbjct: 216 IPAHKRCALKCKFSPDSTLLATCSADQTCKIWRTSNFSLMTELSIKSNNPGETSRGWMWD 275
Query: 54 AAFTLDSKFLLT 65
AF+ DS++++T
Sbjct: 276 CAFSGDSQYIVT 287
Score = 31.6 bits (70), Expect = 1.5, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 5 RAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAF 56
R + C FS D + + T S+D AR+W E + RE + +Q+ V AF
Sbjct: 270 RGWMWDCAFSGDSQYIVTASSDNLARLWCVETGEIKREY-SGHQKAVVCLAF 320
>sp|Q9Z2K5|LST8_RAT Target of rapamycin complex subunit LST8 OS=Rattus norvegicus
GN=Mlst8 PE=1 SV=2
Length = 326
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 47/72 (65%), Gaps = 7/72 (9%)
Query: 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVREL-------GTANQRWVWD 53
+ AH Y L C FSPD LLAT SADQT +IW T +FSL+ EL G +++ W+W
Sbjct: 216 IPAHTRYALQCRFSPDSTLLATCSADQTCKIWRTSNFSLMTELSIKSSNPGESSRGWMWG 275
Query: 54 AAFTLDSKFLLT 65
AF+ DS++++T
Sbjct: 276 CAFSGDSQYIVT 287
Score = 32.7 bits (73), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 11 CVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAF 56
C FS D + + T S+D AR+W E + RE G +Q+ V AF
Sbjct: 276 CAFSGDSQYIVTASSDNLARLWCVETGEIKREYG-GHQKAVVCLAF 320
>sp|O74184|WAT1_SCHPO WD repeat-containing protein wat1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=wat1 PE=1 SV=1
Length = 314
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 3 AHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELG-TANQRWVWDAAFTLDSK 61
AH+ Y CV SPD + LAT SAD T IW+TED S + E +QRWVWD AF+ DS
Sbjct: 213 AHQRYITRCVLSPDVKHLATCSADATVNIWSTEDMSFMLERRLQGHQRWVWDCAFSADST 272
Query: 62 FLLT 65
+L+T
Sbjct: 273 YLVT 276
Score = 29.6 bits (65), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRE 42
+ H+ + C FS D L T S+D AR+W +R+
Sbjct: 255 LQGHQRWVWDCAFSADSTYLVTASSDHVARLWELSSGETIRQ 296
>sp|P41318|LST8_YEAST Target of rapamycin complex subunit LST8 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=LST8 PE=1
SV=1
Length = 303
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 38/63 (60%)
Query: 3 AHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKF 62
AH Y + S D + LAT SAD TAR+W+ +D + +QRWVWD AF+ DS +
Sbjct: 205 AHSTYITRILLSSDVKHLATCSADHTARVWSIDDDFKLETTLDGHQRWVWDCAFSADSAY 264
Query: 63 LLT 65
L+T
Sbjct: 265 LVT 267
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 22/44 (50%)
Query: 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELG 44
+ H+ + C FS D L T S+D R+W+ +VR+ G
Sbjct: 246 LDGHQRWVWDCAFSADSAYLVTASSDHYVRLWDLSTREIVRQYG 289
>sp|Q8YTC2|Y2800_NOSS1 Uncharacterized WD repeat-containing protein alr2800 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=alr2800 PE=4 SV=1
Length = 1258
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 37/61 (60%), Gaps = 3/61 (4%)
Query: 3 AHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKF 62
++R Y +FSP+ ++AT S DQT +IW+ + ++ L T + WV+D AF+ D K
Sbjct: 1104 SNRVYS--AIFSPNGEIIATCSTDQTVKIWDWQQGKCLKTL-TGHTNWVFDIAFSPDGKI 1160
Query: 63 L 63
L
Sbjct: 1161 L 1161
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 12 VFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFL 63
VFSPD +LA+ AD+ ++W+ D ++ L T ++ V+ AF D + L
Sbjct: 691 VFSPDGEILASCGADENVKLWSVRDGVCIKTL-TGHEHEVFSVAFHPDGETL 741
Score = 36.2 bits (82), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Query: 9 LHCV-FSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFL 63
+ CV FSPD LA+++AD T ++W+ +R L ++ WV AF+ D + L
Sbjct: 771 VRCVAFSPDGNTLASSAADHTIKLWDVSQGKCLRTL-KSHTGWVRSVAFSADGQTL 825
Score = 36.2 bits (82), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Query: 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDS 60
+ H F PD LA+ S D+T ++W+ +D + ++ L T + WV AF+ D
Sbjct: 722 LTGHEHEVFSVAFHPDGETLASASGDKTIKLWDIQDGTCLQTL-TGHTDWVRCVAFSPDG 780
Query: 61 KFL 63
L
Sbjct: 781 NTL 783
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 20/33 (60%)
Query: 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWN 33
+ H + FSPD ++LA+ S DQT RIW+
Sbjct: 1142 LTGHTNWVFDIAFSPDGKILASASHDQTVRIWD 1174
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRE-LGTANQRWVWDAAFTLD 59
+ +H + FS D + LA+ S D+T +IWN ++ +G N V+ A++ D
Sbjct: 806 LKSHTGWVRSVAFSADGQTLASGSGDRTIKIWNYHTGECLKTYIGHTNS--VYSIAYSPD 863
Query: 60 SKFLLT 65
SK L++
Sbjct: 864 SKILVS 869
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 13 FSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFL 63
FSPD + LA S DQ+ R+WN ++ N W AF+ D + L
Sbjct: 902 FSPDGQTLACVSLDQSVRLWNCRTGQCLKAW-YGNTDWALPVAFSPDRQIL 951
Score = 33.5 bits (75), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 13/23 (56%), Positives = 17/23 (73%)
Query: 13 FSPDCRLLATTSADQTARIWNTE 35
FSPD ++A+ S DQT RIWN +
Sbjct: 1196 FSPDGEVVASGSQDQTVRIWNVK 1218
Score = 33.5 bits (75), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDS 60
++ H L +SPD +LLA+ SADQ+ R+W+ V L + R V+ A F+ +
Sbjct: 1058 LSEHSDKILGMAWSPDGQLLASASADQSVRLWDCCTGRCVGILRGHSNR-VYSAIFSPNG 1116
Query: 61 KFLLT 65
+ + T
Sbjct: 1117 EIIAT 1121
Score = 33.1 bits (74), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 7 YGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFL 63
+ L FSPD ++LA+ S D+T ++W+ + + L + +++ AF+ DS+ L
Sbjct: 938 WALPVAFSPDRQILASGSNDKTVKLWDWQTGKYISSL-EGHTDFIYGIAFSPDSQTL 993
Score = 32.3 bits (72), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Query: 7 YGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65
YG+ FSPD + LA+ S D + R+WN + L + WV+ F K + T
Sbjct: 982 YGI--AFSPDSQTLASASTDSSVRLWNISTGQCFQIL-LEHTDWVYAVVFHPQGKIIAT 1037
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Query: 13 FSPDCRLLATTSADQTARIWNTEDFSLVREL-GTANQRWVWDAAFTLDSKFL 63
+SPD ++L + S D+T ++W+ + ++ L G N+ V AF+ D + L
Sbjct: 860 YSPDSKILVSGSGDRTIKLWDCQTHICIKTLHGHTNE--VCSVAFSPDGQTL 909
Score = 30.0 bits (66), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 12 VFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFL 63
VF P +++AT SAD T ++WN ++ L + + + A++ D + L
Sbjct: 1027 VFHPQGKIIATGSADCTVKLWNISTGQCLKTLSEHSDK-ILGMAWSPDGQLL 1077
Score = 30.0 bits (66), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 9 LHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFL 63
L FSP+ +LLAT D R+W + L+ + + WV F+ D + L
Sbjct: 646 LSAAFSPEGQLLATCDTDCHVRVWEVKSGKLLL-ICRGHSNWVRFVVFSPDGEIL 699
>sp|Q9D994|WDR38_MOUSE WD repeat-containing protein 38 OS=Mus musculus GN=Wdr38 PE=2 SV=1
Length = 303
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDS 60
+A HR C FSPD RL+A++S+D + R+W+ + L +QR V +F+ DS
Sbjct: 64 LAGHRGPVKSCCFSPDGRLIASSSSDHSIRLWDVARSKCLHVL-KGHQRSVETVSFSPDS 122
Query: 61 KFL 63
K L
Sbjct: 123 KQL 125
>sp|Q8YV57|Y2124_NOSS1 Uncharacterized WD repeat-containing protein all2124 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=all2124 PE=4 SV=1
Length = 1683
Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/49 (44%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 13 FSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSK 61
FSPD + LA+ SAD+T ++W D LV+ L N VWD F+ D K
Sbjct: 1247 FSPDGKTLASASADKTIKLWRIADGKLVKTLKGHNDS-VWDVNFSSDGK 1294
Score = 40.4 bits (93), Expect = 0.003, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDS 60
+ H A + FSPD + +A S D+T ++W+ +D L++ L +Q WV +F+ D
Sbjct: 1193 LTGHSAGVITVRFSPDGQTIAAGSEDKTVKLWHRQDGKLLKTL-NGHQDWVNSLSFSPDG 1251
Query: 61 KFL 63
K L
Sbjct: 1252 KTL 1254
Score = 38.9 bits (89), Expect = 0.009, Method: Composition-based stats.
Identities = 18/63 (28%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDS 60
+ AH F+PD +LA+TSAD+T ++W + D L+ + + V+ ++F+ D
Sbjct: 1526 LPAHNDLVYSVNFNPDGSMLASTSADKTVKLWRSHDGHLLHTF-SGHSNVVYSSSFSPDG 1584
Query: 61 KFL 63
+++
Sbjct: 1585 RYI 1587
Score = 37.4 bits (85), Expect = 0.029, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 13 FSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFL 63
FSPD +++A+ SAD+T R+W++ +L++ L A+ V+ F D L
Sbjct: 1496 FSPDGKIIASASADKTIRLWDSFSGNLIKSL-PAHNDLVYSVNFNPDGSML 1545
Score = 35.4 bits (80), Expect = 0.11, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 13 FSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFL 63
FSPD + +A+ +D+T ++W T D +L++ + T +++ V + F+ D K L
Sbjct: 1121 FSPDGQTIASGGSDKTIKLWQTSDGTLLKTI-TGHEQTVNNVYFSPDGKNL 1170
Score = 35.4 bits (80), Expect = 0.12, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 13 FSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFL 63
FSPD + LA+ S D T ++WN D + L W +F+ D K +
Sbjct: 1454 FSPDGKTLASASRDNTVKLWNVSDGKFKKTLKGHTDEVFW-VSFSPDGKII 1503
Score = 33.9 bits (76), Expect = 0.35, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 13 FSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65
FSPD R +A+ S D+T +IW D L+ L +Q V A F+ D K L++
Sbjct: 1580 FSPDGRYIASASEDKTVKIWQI-DGHLLTTL-PQHQAGVMSAIFSPDGKTLIS 1630
Score = 30.0 bits (66), Expect = 4.8, Method: Composition-based stats.
Identities = 12/32 (37%), Positives = 19/32 (59%)
Query: 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIW 32
+ H+A + +FSPD + L + S D T +IW
Sbjct: 1609 LPQHQAGVMSAIFSPDGKTLISGSLDTTTKIW 1640
Score = 29.6 bits (65), Expect = 5.8, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 20/31 (64%)
Query: 13 FSPDCRLLATTSADQTARIWNTEDFSLVREL 43
FSPD + LA+ S+D + ++W+T L+ L
Sbjct: 1163 FSPDGKNLASASSDHSIKLWDTTSGQLLMTL 1193
Score = 29.3 bits (64), Expect = 8.3, Method: Composition-based stats.
Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Query: 7 YGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVREL 43
YG+ F+P L+A+ +AD+T +IW D ++ L
Sbjct: 1408 YGIS--FTPQGDLIASANADKTVKIWRVRDGKALKTL 1442
>sp|A8X8C6|TG125_CAEBR WD repeat-containing protein tag-125 OS=Caenorhabditis briggsae
GN=tag-125 PE=4 SV=1
Length = 368
Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/53 (45%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 13 FSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65
FSP + L T+SAD+T +IWN D S R L T ++ V D A++ DSK ++T
Sbjct: 87 FSPCGKFLGTSSADKTVKIWNMSDLSCERTL-TGHKLGVNDFAWSADSKSIVT 138
Score = 30.4 bits (67), Expect = 3.7, Method: Composition-based stats.
Identities = 13/43 (30%), Positives = 21/43 (48%)
Query: 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVREL 43
+ H Y C F+P L+ + S D++ RIW+ V+ L
Sbjct: 159 LKGHTNYVFCCNFNPQSSLVVSGSFDESVRIWDVRTGMCVKTL 201
>sp|Q9I9H8|APAF_DANRE Apoptotic protease-activating factor 1 OS=Danio rerio GN=apaf1 PE=2
SV=1
Length = 1261
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%)
Query: 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFT 57
+ AH L C FSPD R +AT ++D+ ++WN E L+RE ++ + FT
Sbjct: 655 LQAHEEDVLCCAFSPDDRHIATCASDRKVKLWNVERGVLIREFEVEHEEQINHCQFT 711
Score = 35.4 bits (80), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 21/28 (75%), Gaps = 1/28 (3%)
Query: 9 LHCV-FSPDCRLLATTSADQTARIWNTE 35
+HCV FSPD LL ++S DQT R+W T+
Sbjct: 887 VHCVQFSPDGSLLLSSSDDQTIRLWETD 914
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 19/33 (57%)
Query: 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWN 33
++ H HC F+ DC +L T+S D T R+W
Sbjct: 1004 LSGHTKTVHHCQFTDDCEILITSSEDSTIRVWK 1036
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDS 60
+ H L C S D RL ATTSA++TA++W++ + ++ L ++ V F+ D+
Sbjct: 1089 LVCHEGAVLSCDVSSDGRLFATTSANRTAKVWSSASWKMLF-LLEGHKDCVRSCRFSWDN 1147
Query: 61 KFLLT 65
K L T
Sbjct: 1148 KRLAT 1152
>sp|O54927|WSB1_MOUSE WD repeat and SOCS box-containing protein 1 OS=Mus musculus GN=Wsb1
PE=1 SV=1
Length = 421
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 27/43 (62%)
Query: 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVREL 43
+ AH+ + C FSPDC +L + A + +WN + ++++R+L
Sbjct: 210 LRAHQNWVYSCAFSPDCSMLCSVGASKAVFLWNMDKYTMIRKL 252
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 31/72 (43%), Gaps = 12/72 (16%)
Query: 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVREL------------GTANQ 48
+ H + C FSPD LLAT S D +W+ + L+ E G AN
Sbjct: 252 LEGHHHDVVACDFSPDGALLATASYDTRVYVWDPHNGDLLMEFGHLFPSPTPIFAGGAND 311
Query: 49 RWVWDAAFTLDS 60
RWV +F+ D
Sbjct: 312 RWVRAVSFSHDG 323
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 13 FSPDCRLL-ATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65
F+PD LL + S D+T R+W+ +D + ++ A+Q WV+ AF+ D L +
Sbjct: 178 FAPDGSLLLVSASRDKTLRVWDLKDDGNMVKVLRAHQNWVYSCAFSPDCSMLCS 231
>sp|Q9W5Z5|WSB1_TAKRU WD repeat and SOCS box-containing protein 1 OS=Takifugu rubripes
GN=wsb1 PE=2 SV=1
Length = 427
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 34/75 (45%), Gaps = 12/75 (16%)
Query: 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVREL------------GTANQ 48
+ H + C FSPD LLAT S D +W+ + S++ EL G AN
Sbjct: 257 LEGHHNDVVSCEFSPDGALLATASYDTRVIVWDHQRGSILLELGHLFPPPSPIFAGGAND 316
Query: 49 RWVWDAAFTLDSKFL 63
RWV +F D + +
Sbjct: 317 RWVRSVSFCADGRHI 331
Score = 32.7 bits (73), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 13 FSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65
FSPD +L + A + +WN + ++L+R+L + V F+ D L T
Sbjct: 227 FSPDSSVLCSVGASKAVLLWNMDKYTLIRKL-EGHHNDVVSCEFSPDGALLAT 278
>sp|Q0V8J1|WSB2_BOVIN WD repeat and SOCS box-containing protein 2 OS=Bos taurus GN=WSB2
PE=2 SV=1
Length = 406
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDS 60
++ H + C SPDC +L + + +++ +W+ ++L+R+L +Q V F+ DS
Sbjct: 195 LSGHLQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKL-EGHQSSVVSCDFSPDS 253
Query: 61 KFLLT 65
L+T
Sbjct: 254 ALLVT 258
Score = 29.3 bits (64), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVREL 43
+ H++ + C FSPD LL T S D +W+ +R L
Sbjct: 237 LEGHQSSVVSCDFSPDSALLVTASYDTNVIMWDPYTGERLRSL 279
>sp|O54929|WSB2_MOUSE WD repeat and SOCS box-containing protein 2 OS=Mus musculus GN=Wsb2
PE=2 SV=2
Length = 404
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDS 60
++ H + C SPDC +L + + +++ +W+ ++L+R+L +Q V F+ DS
Sbjct: 193 LSGHLQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKL-EGHQSSVVSCDFSPDS 251
Query: 61 KFLLT 65
L+T
Sbjct: 252 ALLVT 256
Score = 29.6 bits (65), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVREL 43
+ H++ + C FSPD LL T S D + +W+ +R L
Sbjct: 235 LEGHQSSVVSCDFSPDSALLVTASYDTSVIMWDPYTGERLRSL 277
>sp|Q9NYS7|WSB2_HUMAN WD repeat and SOCS box-containing protein 2 OS=Homo sapiens GN=WSB2
PE=2 SV=1
Length = 404
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDS 60
++ H + C SPDC +L + + +++ +W+ ++L+R+L +Q V F+ DS
Sbjct: 193 LSGHLQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKL-EGHQSSVVSCDFSPDS 251
Query: 61 KFLLT 65
L+T
Sbjct: 252 ALLVT 256
Score = 29.3 bits (64), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVREL 43
+ H++ + C FSPD LL T S D +W+ +R L
Sbjct: 235 LEGHQSSVVSCDFSPDSALLVTASYDTNVIMWDPYTGERLRSL 277
>sp|Q8YRI1|YY46_NOSS1 Uncharacterized WD repeat-containing protein alr3466 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=alr3466 PE=4 SV=1
Length = 1526
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 3 AHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKF 62
H + VFSP+ +LA+ S+DQT R+W+ + + + WV+ AF LD
Sbjct: 946 GHTSRVRSVVFSPNSLMLASGSSDQTVRLWDISSGECLY-IFQGHTGWVYSVAFNLDGSM 1004
Query: 63 LLT 65
L T
Sbjct: 1005 LAT 1007
Score = 36.6 bits (83), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Query: 11 CVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFL 63
+FSPD +LA+ S DQT R+W+ + L N WV F+ D L
Sbjct: 1374 VIFSPDGAILASGSGDQTVRLWSISSGKCLYTLQGHNN-WVGSIVFSPDGTLL 1425
Score = 35.8 bits (81), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 20/33 (60%)
Query: 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWN 33
+ H + VFSPD LLA+ S DQT R+WN
Sbjct: 1406 LQGHNNWVGSIVFSPDGTLLASGSDDQTVRLWN 1438
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Query: 3 AHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGT--ANQRWVWDAAFTLDS 60
H ++ VF+PD +LA+ S+D+T R+W D S + L T + WV AF D
Sbjct: 1240 GHTSWVNSVVFNPDGSMLASGSSDKTVRLW---DISSSKCLHTFQGHTNWVNSVAFNPDG 1296
Query: 61 KFL 63
L
Sbjct: 1297 SML 1299
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
Query: 3 AHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFS-LVRELGTANQRWVWDAAFTLDSK 61
H ++ FSPD +LA+ S DQT R+W+ L LG N WV F+ D
Sbjct: 1324 GHTSWVSSVTFSPDGTMLASGSDDQTVRLWSISSGECLYTFLGHTN--WVGSVIFSPDGA 1381
Query: 62 FL 63
L
Sbjct: 1382 IL 1383
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 20/32 (62%)
Query: 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIW 32
+ H ++ VF+PD LA+ S+DQT R+W
Sbjct: 1196 LQGHTSWVNSVVFNPDGSTLASGSSDQTVRLW 1227
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Query: 13 FSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFL 63
F+PD +LA+ S DQT R+W + + WV F+ D L
Sbjct: 1292 FNPDGSMLASGSGDQTVRLWEISSSKCLHTF-QGHTSWVSSVTFSPDGTML 1341
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Query: 13 FSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFL 63
FSPD LA+ S DQT R+W+ + L + WV F D L
Sbjct: 1166 FSPDGATLASGSGDQTVRLWDISSSKCLYIL-QGHTSWVNSVVFNPDGSTL 1215
Score = 30.0 bits (66), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Query: 12 VFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFL 63
VFSP+ LA S+DQ R+W+ + L + WV AF+ D L
Sbjct: 1123 VFSPNGVTLANGSSDQIVRLWDISSKKCLYTL-QGHTNWVNAVAFSPDGATL 1173
>sp|Q9EPV5|APAF_RAT Apoptotic protease-activating factor 1 OS=Rattus norvegicus GN=Apaf1
PE=2 SV=1
Length = 1249
Score = 39.3 bits (90), Expect = 0.007, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 4 HRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFL 63
H+ L C S D ++TSAD+TA+IW+ E S + EL N V +AF+LD L
Sbjct: 1084 HQGTVLSCAISSDATKFSSTSADKTAKIWSFELPSPLHELKGHNS-CVRCSAFSLDGILL 1142
Query: 64 LT 65
T
Sbjct: 1143 AT 1144
Score = 36.2 bits (82), Expect = 0.061, Method: Composition-based stats.
Identities = 16/33 (48%), Positives = 20/33 (60%)
Query: 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWN 33
M H HC FSPD LLA+ SAD T ++W+
Sbjct: 739 MFGHTNSVTHCRFSPDDELLASCSADGTLKLWD 771
Score = 34.3 bits (77), Expect = 0.26, Method: Composition-based stats.
Identities = 24/61 (39%), Positives = 29/61 (47%), Gaps = 8/61 (13%)
Query: 13 FSPDCRLLATTSADQTARIWNTEDFSLVR-------ELGTANQ-RWVWDAAFTLDSKFLL 64
FS D LLAT + RIWN D L+ E GTA WV D F+ D K L+
Sbjct: 1135 FSLDGILLATGDDNGEIRIWNVSDGQLLHLCAPISIEEGTATHGGWVTDVCFSPDRKMLV 1194
Query: 65 T 65
+
Sbjct: 1195 S 1195
Score = 30.4 bits (67), Expect = 3.7, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 21/40 (52%)
Query: 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLV 40
+ AH L C FS D +AT S D+ +IW++ LV
Sbjct: 653 IKAHEDEVLCCAFSSDDSYIATCSVDKKVKIWDSGTGKLV 692
Score = 29.3 bits (64), Expect = 7.3, Method: Composition-based stats.
Identities = 13/32 (40%), Positives = 17/32 (53%)
Query: 3 AHRAYGLHCVFSPDCRLLATTSADQTARIWNT 34
H ++ +FSPD T S DQT R+W T
Sbjct: 880 GHLSWVHGVMFSPDGSSFLTASDDQTIRVWET 911
>sp|Q55563|Y163_SYNY3 Uncharacterized WD repeat-containing protein sll0163 OS=Synechocystis
sp. (strain PCC 6803 / Kazusa) GN=sll0163 PE=4 SV=1
Length = 1693
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 6/67 (8%)
Query: 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTAN--QRWVWDAAFTL 58
+ H+ L+ FSPD + + T S D TAR+WN REL ++ ++ A F+
Sbjct: 1420 LRGHQDAVLNVRFSPDSQYIVTASKDGTARVWNNTG----RELAVLRHYEKNIFAAEFSA 1475
Query: 59 DSKFLLT 65
D +F++T
Sbjct: 1476 DGQFIVT 1482
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 40/67 (59%), Gaps = 6/67 (8%)
Query: 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNT--EDFSLVRELGTANQRWVWDAAFTL 58
+A H+ + FSPD + + T SAD+TA++WN + +++R +Q V + F+
Sbjct: 1379 LADHQGWVREGQFSPDGQWIVTGSADKTAQLWNVLGKKLTVLR----GHQDAVLNVRFSP 1434
Query: 59 DSKFLLT 65
DS++++T
Sbjct: 1435 DSQYIVT 1441
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 13 FSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65
+SPD ++L T S D TAR+W+ L+ G N WV A F+ D +++LT
Sbjct: 1596 WSPDGQMLVTASNDGTARLWDLSGRELLTLEGHGN--WVRSAEFSPDGRWVLT 1646
Score = 36.6 bits (83), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 40/65 (61%), Gaps = 6/65 (9%)
Query: 3 AHRAYGLHCVFSPDCRLLATTSADQTARIWN--TEDFSLVRELGTANQRWVWDAAFTLDS 60
H ++ + FSPD + + T SAD TAR+W+ ++ F++++ +Q WV +A ++ D
Sbjct: 1176 GHTSWVRNAQFSPDGQWIVTCSADGTARLWDLSSQCFAVLK----GHQNWVNNALWSPDG 1231
Query: 61 KFLLT 65
+ ++T
Sbjct: 1232 QHIIT 1236
Score = 36.6 bits (83), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDS 60
+A H++ FSP+ L+AT SAD TAR+W+ ++ G +Q V ++ D
Sbjct: 1543 LAGHQSIVYQARFSPEGNLIATVSADHTARLWDRSGKTVAVLYG--HQGLVGTVDWSPDG 1600
Query: 61 KFLLT 65
+ L+T
Sbjct: 1601 QMLVT 1605
Score = 36.2 bits (82), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Query: 13 FSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65
FSP + L T+ D TARIWN L G A+ WV +A F + LLT
Sbjct: 1104 FSPHHQFLVTSGQDNTARIWNFAGEQLTLCQGHAD--WVRNAEFNCHGQILLT 1154
Score = 35.8 bits (81), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 13 FSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65
FS D + + T S D TAR+W E L G +Q+ V+DA F+ D +F+ T
Sbjct: 1268 FSLDGQKIVTYSTDNTARLWTKEGTLLTILRG--HQKEVYDADFSADGRFVFT 1318
Score = 33.9 bits (76), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDS 60
+ H + + F+P L T S D+TAR+W TE + + +Q WV + F+ D
Sbjct: 1338 LTGHSHWVRNAHFNPKGDRLLTVSRDKTARLWTTEGECVA--VLADHQGWVREGQFSPDG 1395
Query: 61 KFLLT 65
++++T
Sbjct: 1396 QWIVT 1400
Score = 33.1 bits (74), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Query: 13 FSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65
FS D R + T SADQTAR W+ + T + WV +A F LLT
Sbjct: 1309 FSADGRFVFTVSADQTARQWDISQKDTITL--TGHSHWVRNAHFNPKGDRLLT 1359
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 6/55 (10%)
Query: 13 FSPDCRLLATTSADQTARIWNTEDFSLVRELGT--ANQRWVWDAAFTLDSKFLLT 65
FS D + + T S D TA IW + RE+G ++ V+ A F+ DS+++LT
Sbjct: 1473 FSADGQFIVTASDDNTAGIWEI----VGREVGICRGHEGPVYFAQFSADSRYILT 1523
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 6/55 (10%)
Query: 13 FSPDCRLLATTSADQTARIWNTEDFSLVRELG--TANQRWVWDAAFTLDSKFLLT 65
F+ ++L T S D TAR+W+ E RE+G + WV +A F+ D ++++T
Sbjct: 1145 FNCHGQILLTASRDGTARLWDLEG----REIGLCQGHTSWVRNAQFSPDGQWIVT 1195
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 30/65 (46%), Gaps = 6/65 (9%)
Query: 3 AHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGT--ANQRWVWDAAFTLDS 60
H FS D R + T S D TARIW DF L R L T +Q V+ A F+ +
Sbjct: 1504 GHEGPVYFAQFSADSRYILTASVDNTARIW---DF-LGRPLLTLAGHQSIVYQARFSPEG 1559
Query: 61 KFLLT 65
+ T
Sbjct: 1560 NLIAT 1564
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 38/67 (56%), Gaps = 6/67 (8%)
Query: 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGT--ANQRWVWDAAFTL 58
+ H+ + + ++SPD + + T+S+D TAR+W+ + LGT + + A F+L
Sbjct: 1215 LKGHQNWVNNALWSPDGQHIITSSSDGTARVWSRHG----KCLGTLRGHDHNIHGARFSL 1270
Query: 59 DSKFLLT 65
D + ++T
Sbjct: 1271 DGQKIVT 1277
Score = 29.3 bits (64), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 12/20 (60%), Positives = 16/20 (80%)
Query: 13 FSPDCRLLATTSADQTARIW 32
FSPD R + T+SAD TA++W
Sbjct: 1637 FSPDGRWVLTSSADGTAKLW 1656
>sp|Q05946|UTP13_YEAST U3 small nucleolar RNA-associated protein 13 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=UTP13 PE=1
SV=1
Length = 817
Score = 38.5 bits (88), Expect = 0.011, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 14 SPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65
SP+ + AT S D+T +IWN E+ L L ++R +WD +F K L T
Sbjct: 500 SPNDSIFATASYDKTCKIWNLENGELEATLAN-HKRGLWDVSFCQYDKLLAT 550
Score = 32.7 bits (73), Expect = 0.64, Method: Composition-based stats.
Identities = 12/26 (46%), Positives = 21/26 (80%)
Query: 18 RLLATTSADQTARIWNTEDFSLVREL 43
+LLAT+S D+T +IW+ + FS+++ L
Sbjct: 546 KLLATSSGDKTVKIWSLDTFSVMKTL 571
>sp|O88879|APAF_MOUSE Apoptotic protease-activating factor 1 OS=Mus musculus GN=Apaf1 PE=1
SV=3
Length = 1249
Score = 38.5 bits (88), Expect = 0.012, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 4 HRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFL 63
H+ L C S D ++TSAD+TA+IW+ + S + EL N V +AF+LD L
Sbjct: 1084 HQGTVLSCAISSDATKFSSTSADKTAKIWSFDLLSPLHELKGHNG-CVRCSAFSLDGILL 1142
Query: 64 LT 65
T
Sbjct: 1143 AT 1144
Score = 36.6 bits (83), Expect = 0.050, Method: Composition-based stats.
Identities = 15/24 (62%), Positives = 18/24 (75%)
Query: 10 HCVFSPDCRLLATTSADQTARIWN 33
HC FSPD LLA+ SAD T R+W+
Sbjct: 748 HCRFSPDDELLASCSADGTLRLWD 771
Score = 35.0 bits (79), Expect = 0.15, Method: Composition-based stats.
Identities = 25/61 (40%), Positives = 30/61 (49%), Gaps = 8/61 (13%)
Query: 13 FSPDCRLLATTSADQTARIWNTEDFSLVR-------ELGTANQ-RWVWDAAFTLDSKFLL 64
FS D LLAT + RIWN D L+ E GTA WV D F+ DSK L+
Sbjct: 1135 FSLDGILLATGDDNGEIRIWNVSDGQLLHSCAPISVEEGTATHGGWVTDVCFSPDSKTLV 1194
Query: 65 T 65
+
Sbjct: 1195 S 1195
Score = 32.3 bits (72), Expect = 0.91, Method: Composition-based stats.
Identities = 16/40 (40%), Positives = 22/40 (55%)
Query: 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLV 40
+ AH L C FS D +AT SAD+ +IW++ LV
Sbjct: 653 IKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLV 692
Score = 29.6 bits (65), Expect = 6.4, Method: Composition-based stats.
Identities = 12/24 (50%), Positives = 15/24 (62%)
Query: 12 VFSPDCRLLATTSADQTARIWNTE 35
+FSPD T S DQT R+W T+
Sbjct: 889 MFSPDGSSFLTASDDQTIRVWETK 912
>sp|Q7T2F6|WSB1_DANRE WD repeat and SOCS box-containing protein 1 OS=Danio rerio GN=wsb1
PE=2 SV=1
Length = 423
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 33/75 (44%), Gaps = 12/75 (16%)
Query: 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVREL------------GTANQ 48
+ H + C FSPD LLAT S D +W+ +++ EL G AN
Sbjct: 253 LEGHHNDVVCCEFSPDGALLATASYDTRVIVWDPHTATVLLELGHLFPPPSPIFAGGAND 312
Query: 49 RWVWDAAFTLDSKFL 63
RWV AF D + +
Sbjct: 313 RWVRSVAFCHDGRHI 327
Score = 37.0 bits (84), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 13 FSPDCRL-LATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65
F+PD L L + S D+T R+W+ +D + ++ +Q WV+ +AF+ DS L +
Sbjct: 179 FAPDGSLVLVSASRDKTLRVWDLKDDGNMVKVLRGHQNWVYCSAFSPDSSVLCS 232
Score = 29.6 bits (65), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 11/43 (25%), Positives = 24/43 (55%)
Query: 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVREL 43
+ H+ + FSPD +L + A + +W+ + ++L+R+L
Sbjct: 211 LRGHQNWVYCSAFSPDSSVLCSVGAGKAVFLWDMDKYTLIRKL 253
>sp|Q54KL5|WDR5_DICDI WD repeat-containing protein 5 homolog OS=Dictyostelium discoideum
GN=wdr5 PE=3 SV=1
Length = 335
Score = 38.1 bits (87), Expect = 0.014, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 13 FSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65
FSPD + LA+ SAD+T +IW D R L ++ + D A++ DSK + +
Sbjct: 54 FSPDGKWLASASADKTIKIWGAYDGKFERTL-EGHKEGISDIAWSQDSKLICS 105
Score = 32.3 bits (72), Expect = 0.93, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 8 GLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64
G+H F+ D L+ + S D T RIW+T L+ + T + + V F+ + KF+L
Sbjct: 177 GVH--FNRDGTLVVSGSYDGTVRIWDTTTGQLLNTISTEDGKEVSFVKFSPNGKFVL 231
Score = 31.6 bits (70), Expect = 1.6, Method: Composition-based stats.
Identities = 14/53 (26%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 13 FSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65
+S D +L+ + S D+T +IW+ E +V+ L ++ +V+ +F S +++
Sbjct: 96 WSQDSKLICSASDDKTIKIWDVESGKMVKTL-KGHKEYVFGVSFNPQSNLIVS 147
>sp|Q9Y6I7|WSB1_HUMAN WD repeat and SOCS box-containing protein 1 OS=Homo sapiens GN=WSB1
PE=1 SV=1
Length = 421
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 13 FSPDCRL-LATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFL 63
F+PD L L + S D+T R+W+ +D + ++ +Q WV+ AF+ DS L
Sbjct: 178 FAPDGSLILVSASRDKTLRVWDLKDDGNMMKVLRGHQNWVYSCAFSPDSSML 229
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 31/72 (43%), Gaps = 12/72 (16%)
Query: 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVREL------------GTANQ 48
+ H + C FSPD LLAT S D IW+ + ++ E G AN
Sbjct: 252 LEGHHHDVVACDFSPDGALLATASYDTRVYIWDPHNGDILMEFGHLFPPPTPIFAGGAND 311
Query: 49 RWVWDAAFTLDS 60
RWV +F+ D
Sbjct: 312 RWVRSVSFSHDG 323
Score = 36.2 bits (82), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 12/43 (27%), Positives = 25/43 (58%)
Query: 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVREL 43
+ H+ + C FSPD +L + A + +WN + ++++R+L
Sbjct: 210 LRGHQNWVYSCAFSPDSSMLCSVGASKAVFLWNMDKYTMIRKL 252
>sp|Q26544|WSL17_SCHMA WD repeat-containing protein SL1-17 OS=Schistosoma mansoni PE=2
SV=1
Length = 301
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 30/53 (56%)
Query: 13 FSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65
FSPD RLLA+ S D+ ++++ D LV ++ WV F D++ L+T
Sbjct: 194 FSPDGRLLASASDDKQIKVFDVRDGRLVIPSLNGHKGWVVSVDFASDNRHLVT 246
>sp|B8P4B0|LIS11_POSPM Nuclear distribution protein PAC1-1 OS=Postia placenta (strain ATCC
44394 / Madison 698-R) GN=PAC1-1 PE=3 SV=1
Length = 438
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Query: 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDS 60
+ +HRA F P LLA+ S D T +IW+ E S R L + R VW F
Sbjct: 104 LTSHRAPITRVAFHPTFSLLASASEDTTVKIWDWETGSFERTL-KGHTREVWGVDFDSKG 162
Query: 61 KFLLT 65
FL T
Sbjct: 163 SFLAT 167
>sp|B8PD53|LIS12_POSPM Nuclear distribution protein PAC1-2 OS=Postia placenta (strain ATCC
44394 / Madison 698-R) GN=PAC1-2 PE=3 SV=1
Length = 427
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Query: 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDS 60
+ +HRA F P LLA+ S D T +IW+ E S R L + R VW F
Sbjct: 104 LTSHRAPITRVAFHPTFSLLASASEDTTVKIWDWETGSFERTL-KGHTREVWGVDFDSKG 162
Query: 61 KFLLT 65
FL T
Sbjct: 163 SFLAT 167
>sp|Q9UUG8|TUP12_SCHPO Transcriptional repressor tup12 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=tup12 PE=1 SV=2
Length = 598
Score = 37.7 bits (86), Expect = 0.019, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Query: 12 VFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65
+FSPD + +A S D+ RIW T +LV +L ++ V+ AF+ D K+L++
Sbjct: 436 MFSPDGQFIAAGSLDKVIRIW-TSSGTLVEQL-HGHEESVYSVAFSPDGKYLVS 487
Score = 36.2 bits (82), Expect = 0.065, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 13 FSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65
FSPD + LAT DQ RIW+ + R L T +++ ++ F+ D K L++
Sbjct: 354 FSPDGKYLATGVEDQQIRIWDIAQKRVYRLL-TGHEQEIYSLDFSKDGKTLVS 405
>sp|Q5JTN6|WDR38_HUMAN WD repeat-containing protein 38 OS=Homo sapiens GN=WDR38 PE=2 SV=1
Length = 314
Score = 37.7 bits (86), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Query: 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDS 60
+ H C FSPD L A+ S D T R+W+ +R L +QR V +F+ DS
Sbjct: 59 LGGHTGPVKFCRFSPDGHLFASASCDCTVRLWDVARAKCLRVL-KGHQRSVETVSFSPDS 117
Query: 61 KFL 63
+ L
Sbjct: 118 RQL 120
>sp|Q5FVN8|WSDU1_RAT WD repeat, SAM and U-box domain-containing protein 1 OS=Rattus
norvegicus GN=Wdsub1 PE=2 SV=1
Length = 476
Score = 37.4 bits (85), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Query: 11 CVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65
C FSPD LA+ +AD + +WN + L R G+ + AF+ D L+T
Sbjct: 103 CCFSPDSTYLASGAADGSVVLWNAHSYKLYR-CGSVKDSSLVACAFSPDGGLLVT 156
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 18/33 (54%)
Query: 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWN 33
+ H Y C F+P+ LLAT S D+T IW
Sbjct: 277 LTQHTRYVTTCAFAPNTLLLATGSMDKTVNIWQ 309
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Query: 7 YGLHCV-FSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFL 63
Y +HC FSP +LA+ S D T +W+ + L V F+ DS +L
Sbjct: 55 YAVHCCSFSPSGHVLASCSTDGTTVLWSAHSGHTLTVLEQPGGSPVRVCCFSPDSTYL 112
>sp|Q00808|HETE1_PODAS Vegetative incompatibility protein HET-E-1 OS=Podospora anserina
GN=HET-E1 PE=4 SV=1
Length = 1356
Score = 37.0 bits (84), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDS 60
+ H + L FSPD + +A+ S D+T +IW+T + + L + VW AF+ D
Sbjct: 963 LEGHGSSVLSVAFSPDGQRVASGSGDKTIKIWDTASGTCTQTL-EGHGGSVWSVAFSPDG 1021
Query: 61 K 61
+
Sbjct: 1022 Q 1022
Score = 35.8 bits (81), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDS 60
+ H + FSPD + +A+ S+D+T +IW+T + + L + WV AF+ D
Sbjct: 1173 LEGHGGWVQSVAFSPDGQRVASGSSDKTIKIWDTASGTCTQTL-EGHGGWVQSVAFSPDG 1231
Query: 61 K 61
+
Sbjct: 1232 Q 1232
Score = 33.5 bits (75), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Query: 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDS 60
+ H + VFSPD + +A+ S D T +IW+ + + L + VW AF+ D
Sbjct: 1047 LEGHGGWVQSVVFSPDGQRVASGSDDHTIKIWDAVSGTCTQTL-EGHGDSVWSVAFSPDG 1105
Query: 61 K 61
+
Sbjct: 1106 Q 1106
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Query: 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDS 60
+ H FSPD + +A+ S D+T +IW+T + + L + WV F+ D
Sbjct: 1005 LEGHGGSVWSVAFSPDGQRVASGSDDKTIKIWDTASGTCTQTL-EGHGGWVQSVVFSPDG 1063
Query: 61 K 61
+
Sbjct: 1064 Q 1064
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Query: 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDS 60
+ H + FSPD + +A+ S D T +IW+ + + L + WV AF+ D
Sbjct: 1131 LEGHGGWVHSVAFSPDGQRVASGSIDGTIKIWDAASGTCTQTL-EGHGGWVQSVAFSPDG 1189
Query: 61 K 61
+
Sbjct: 1190 Q 1190
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLD 59
+ H + L FS D + +A+ S D+T +IW+T + + L + VW AF+ D
Sbjct: 837 LEGHGSSVLSVAFSADGQRVASGSDDKTIKIWDTASGTGTQTL-EGHGGSVWSVAFSPD 894
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 20/34 (58%)
Query: 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNT 34
+ H + FSPD + +A+ S+D T +IW+T
Sbjct: 1215 LEGHGGWVQSVAFSPDGQRVASGSSDNTIKIWDT 1248
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 13 FSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSK 61
FSPD + +A+ S D T +IW+ + + L + WV AF+ D +
Sbjct: 1101 FSPDGQRVASGSIDGTIKIWDAASGTCTQTL-EGHGGWVHSVAFSPDGQ 1148
>sp|Q8N9V3|WSDU1_HUMAN WD repeat, SAM and U-box domain-containing protein 1 OS=Homo
sapiens GN=WDSUB1 PE=1 SV=3
Length = 476
Score = 37.0 bits (84), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 11 CVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65
C FSPD LA+ +AD T +WN + + L R G+ + AF+ + F +T
Sbjct: 103 CQFSPDSTCLASGAADGTVVLWNAQSYKLYR-CGSVKDGSLAACAFSPNGSFFVT 156
Score = 36.2 bits (82), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 7 YGLHCV-FSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFL 63
Y +HC FSP +LA+ S D T +WNTE+ ++ + + V F+ DS L
Sbjct: 55 YAVHCCCFSPSGHILASCSTDGTTVLWNTENGQMLAVMEQPSGSPVRVCQFSPDSTCL 112
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 25/48 (52%)
Query: 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQ 48
+ H Y C F+P+ LLAT S D+T IW + +L + T +Q
Sbjct: 277 LTQHTRYVTTCAFAPNTLLLATGSMDKTVNIWQFDLETLCQARRTEHQ 324
>sp|Q6P1V3|WSB1_XENTR WD repeat and SOCS box-containing protein 1 OS=Xenopus tropicalis
GN=wsb1 PE=2 SV=1
Length = 422
Score = 36.6 bits (83), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 13 FSPDCRL-LATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFL 63
F+PD L L + S D+T R+W+ +D + ++ +Q WV+ AF+ DS L
Sbjct: 178 FAPDGSLILVSASRDKTLRVWDLKDDGNMMKVLRGHQNWVYCCAFSPDSSML 229
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 27/62 (43%), Gaps = 12/62 (19%)
Query: 11 CVFSPDCRLLATTSADQTARIWNTEDFSLVREL------------GTANQRWVWDAAFTL 58
C FSPD LLAT S D +W+ S++ E G N RWV +F+
Sbjct: 262 CEFSPDGALLATASYDTRVYVWDPHIGSILFEFGHLFPPPTPIFAGGDNGRWVKSVSFSH 321
Query: 59 DS 60
D
Sbjct: 322 DG 323
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 11/43 (25%), Positives = 25/43 (58%)
Query: 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVREL 43
+ H+ + C FSPD +L + A + +W+ + ++++R+L
Sbjct: 210 LRGHQNWVYCCAFSPDSSMLCSVGAGKAVFLWDMDKYTMIRKL 252
>sp|P74442|Y143_SYNY3 Uncharacterized WD repeat-containing protein slr0143
OS=Synechocystis sp. (strain PCC 6803 / Kazusa)
GN=slr0143 PE=4 SV=1
Length = 1191
Score = 36.2 bits (82), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDS 60
+ H+ FSPD +LA+TS D+T R+W+ + LG + + V DA F+ D
Sbjct: 638 LKGHQDSVYSVSFSPDGEILASTSRDRTVRLWHWRSGKTLAVLG-GHTKSVDDAQFSPDG 696
Query: 61 KFLLT 65
+ L++
Sbjct: 697 QTLVS 701
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Query: 13 FSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFL 63
FSP+ ++ AT DQT +IW+ D +L++ L +Q V+ +F+ D + L
Sbjct: 609 FSPNGKIFATAGQDQTVKIWDL-DGNLLQTL-KGHQDSVYSVSFSPDGEIL 657
>sp|Q9D0I6|WSDU1_MOUSE WD repeat, SAM and U-box domain-containing protein 1 OS=Mus
musculus GN=Wdsub1 PE=2 SV=1
Length = 474
Score = 36.2 bits (82), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Query: 11 CVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65
C FSPD LA+ +AD + +WN + + L R G+ + AF+ D +T
Sbjct: 103 CCFSPDSAYLASGAADGSIALWNAQTYKLYR-CGSVKDSSLVACAFSPDGGLFVT 156
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 18/33 (54%)
Query: 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWN 33
+ H Y C F+P+ LLAT S D+T IW
Sbjct: 276 LTQHTRYVTTCAFAPNTLLLATGSMDKTVNIWQ 308
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Query: 7 YGLHCV-FSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFL 63
Y +HC FSP +LA+ S D T +W++ + L V F+ DS +L
Sbjct: 55 YAVHCCCFSPSGHVLASCSTDGTTVLWSSHSGHTLTVLEQPGGSPVRVCCFSPDSAYL 112
>sp|O14727|APAF_HUMAN Apoptotic protease-activating factor 1 OS=Homo sapiens GN=APAF1
PE=1 SV=2
Length = 1248
Score = 36.2 bits (82), Expect = 0.067, Method: Composition-based stats.
Identities = 14/24 (58%), Positives = 19/24 (79%)
Query: 10 HCVFSPDCRLLATTSADQTARIWN 33
HC FSPD +LLA+ SAD T ++W+
Sbjct: 748 HCRFSPDDKLLASCSADGTLKLWD 771
Score = 35.4 bits (80), Expect = 0.12, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 4 HRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFL 63
H+ L C S D ++TSAD+TA+IW+ + + EL N V +AF++DS L
Sbjct: 1084 HQGTVLSCDISHDATKFSSTSADKTAKIWSFDLLLPLHELRGHNG-CVRCSAFSVDSTLL 1142
Query: 64 LT 65
T
Sbjct: 1143 AT 1144
Score = 35.0 bits (79), Expect = 0.14, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 22/40 (55%)
Query: 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLV 40
+ AH L C FS D R +AT S D+ +IWN+ LV
Sbjct: 653 IKAHEDEVLCCAFSTDDRFIATCSVDKKVKIWNSMTGELV 692
Score = 32.0 bits (71), Expect = 1.0, Method: Composition-based stats.
Identities = 22/60 (36%), Positives = 28/60 (46%), Gaps = 7/60 (11%)
Query: 13 FSPDCRLLATTSADQTARIWNTEDFSLVR------ELGTANQ-RWVWDAAFTLDSKFLLT 65
FS D LLAT + RIWN + L+ E G A WV D F+ D K L++
Sbjct: 1135 FSVDSTLLATGDDNGEIRIWNVSNGELLHLCAPLSEEGAATHGGWVTDLCFSPDGKMLIS 1194
Score = 29.6 bits (65), Expect = 5.6, Method: Composition-based stats.
Identities = 12/24 (50%), Positives = 16/24 (66%)
Query: 12 VFSPDCRLLATTSADQTARIWNTE 35
+FSPD T+S DQT R+W T+
Sbjct: 889 MFSPDGSSFLTSSDDQTIRLWETK 912
>sp|O75529|TAF5L_HUMAN TAF5-like RNA polymerase II p300/CBP-associated factor-associated
factor 65 kDa subunit 5L OS=Homo sapiens GN=TAF5L PE=1
SV=1
Length = 589
Score = 36.2 bits (82), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 2 AAHRAYGLHCV-FSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDS 60
A H A + CV F P+ LAT S D+T R+W+ + + VR L T ++ V AF+ +
Sbjct: 423 AGHLA-DVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVR-LFTGHRGPVLSLAFSPNG 480
Query: 61 KFL 63
K+L
Sbjct: 481 KYL 483
Score = 32.3 bits (72), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 22/41 (53%)
Query: 3 AHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVREL 43
HR L FSP+ + LA+ DQ ++W+ +L +EL
Sbjct: 466 GHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKEL 506
>sp|Q17963|TG125_CAEEL WD repeat-containing protein tag-125 OS=Caenorhabditis elegans
GN=tag-125 PE=4 SV=1
Length = 376
Score = 35.8 bits (81), Expect = 0.070, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 13 FSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65
FSP + L T+SAD+T +IWN + R L T ++ V D A++ DS+ +++
Sbjct: 95 FSPCGKYLGTSSADKTVKIWNMDHMICERTL-TGHKLGVNDIAWSSDSRCVVS 146
Score = 30.4 bits (67), Expect = 3.8, Method: Composition-based stats.
Identities = 12/43 (27%), Positives = 22/43 (51%)
Query: 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVREL 43
+ H Y C F+P L+ + S D++ RIW+ + ++ L
Sbjct: 167 LKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGMCIKTL 209
>sp|Q58D20|NLE1_BOVIN Notchless protein homolog 1 OS=Bos taurus GN=NLE1 PE=2 SV=3
Length = 486
Score = 35.8 bits (81), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDS 60
M H+A VFSPD R++A+ S D++ ++W+ + L + V+ A++ DS
Sbjct: 369 MTGHQALINQVVFSPDSRVIASASFDKSIKLWDGRTGKYLASL-RGHVAAVYQIAWSADS 427
Query: 61 KFLLT 65
+ L++
Sbjct: 428 RLLVS 432
Score = 29.3 bits (64), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 9/21 (42%), Positives = 17/21 (80%)
Query: 14 SPDCRLLATTSADQTARIWNT 34
+P+CR +A++S D + R+W+T
Sbjct: 214 NPECRYVASSSKDGSVRVWDT 234
>sp|Q06440|CORO_YEAST Coronin-like protein OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=CRN1 PE=1 SV=1
Length = 651
Score = 35.8 bits (81), Expect = 0.078, Method: Composition-based stats.
Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
Query: 13 FSPDCRLLATTSADQTARIWNTEDFSLVRE----LGTANQRWVW 52
FS D LAT + D+ R+WN + +V E G NQR VW
Sbjct: 190 FSYDGNYLATVARDKKLRVWNIREEKIVSEGPAHTGAKNQRVVW 233
>sp|O74855|NLE1_SCHPO Ribosome assembly protein C18.05c OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPCC18.05c PE=3 SV=1
Length = 502
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDS 60
M H+ H FSPD R +AT S D + R+W+ + + L + V+ A++ DS
Sbjct: 385 MHGHQKVVNHASFSPDGRCIATASFDSSVRLWDGKTGKFLATL-RGHVAAVYQCAWSTDS 443
Query: 61 KFLLT 65
+ L++
Sbjct: 444 RLLVS 448
>sp|P49695|PKWA_THECU Probable serine/threonine-protein kinase PkwA OS=Thermomonospora
curvata GN=pkwA PE=3 SV=1
Length = 742
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 9/65 (13%)
Query: 3 AHRAYGLHCVFSPDCRLLATTSADQTARIWN----TEDFSLVRELGTANQRWVWDAAFTL 58
H Y L FSPD ++A+ S D TAR+WN TE L + +V+ AF+
Sbjct: 541 GHTHYVLDIAFSPDGSMVASGSRDGTARLWNVATGTEHAVL-----KGHTDYVYAVAFSP 595
Query: 59 DSKFL 63
D +
Sbjct: 596 DGSMV 600
Score = 32.3 bits (72), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 11 CVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFL 63
FSPD LLA+ S D T R+W+ + R + + +V D AF+ D +
Sbjct: 507 VAFSPDGALLASGSDDATVRLWDVA-AAEERAVFEGHTHYVLDIAFSPDGSMV 558
>sp|Q12788|TBL3_HUMAN Transducin beta-like protein 3 OS=Homo sapiens GN=TBL3 PE=1 SV=2
Length = 808
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 28/41 (68%), Gaps = 2/41 (4%)
Query: 2 AAHRAYGLHCV-FSPDCRLLATTSADQTARIWNTEDFSLVR 41
+ HR GL CV FSP ++LAT SAD T ++W +DFS ++
Sbjct: 518 SGHR-RGLWCVQFSPMDQVLATASADGTIKLWALQDFSCLK 557
>sp|P0CS38|HIR1_CRYNJ Protein HIR1 OS=Cryptococcus neoformans var. neoformans serotype D
(strain JEC21 / ATCC MYA-565) GN=HIR1 PE=3 SV=1
Length = 881
Score = 35.0 bits (79), Expect = 0.12, Method: Composition-based stats.
Identities = 16/40 (40%), Positives = 23/40 (57%)
Query: 4 HRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVREL 43
H+ + + P LAT S D+T +IWNTED+SL +
Sbjct: 172 HQGFVKGVCWDPVGNYLATQSDDKTVKIWNTEDWSLAETI 211
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.326 0.132 0.438
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,061,286
Number of Sequences: 539616
Number of extensions: 574170
Number of successful extensions: 4556
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 203
Number of HSP's successfully gapped in prelim test: 107
Number of HSP's that attempted gapping in prelim test: 3493
Number of HSP's gapped (non-prelim): 1209
length of query: 65
length of database: 191,569,459
effective HSP length: 37
effective length of query: 28
effective length of database: 171,603,667
effective search space: 4804902676
effective search space used: 4804902676
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 55 (25.8 bits)