Query psy7061
Match_columns 65
No_of_seqs 114 out of 2620
Neff 12.8
Searched_HMMs 46136
Date Fri Aug 16 17:07:49 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7061.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/7061hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0271|consensus 99.8 3.1E-18 6.7E-23 80.1 6.9 64 1-65 111-174 (480)
2 KOG0272|consensus 99.7 7.8E-17 1.7E-21 75.9 6.3 63 2-65 300-362 (459)
3 KOG0263|consensus 99.7 2.1E-16 4.5E-21 78.2 6.8 63 2-65 532-594 (707)
4 KOG0266|consensus 99.6 7.3E-15 1.6E-19 71.0 8.6 64 1-65 242-305 (456)
5 KOG0272|consensus 99.6 1E-15 2.2E-20 72.3 5.4 64 1-65 341-405 (459)
6 KOG0263|consensus 99.6 3.4E-15 7.4E-20 74.1 7.0 64 1-65 447-510 (707)
7 KOG0271|consensus 99.6 2.4E-15 5.3E-20 70.7 5.7 63 2-65 364-426 (480)
8 KOG0286|consensus 99.6 3.2E-14 6.9E-19 65.1 8.1 64 1-65 51-114 (343)
9 KOG1539|consensus 99.6 2.1E-14 4.5E-19 72.3 7.4 63 1-65 572-634 (910)
10 KOG0286|consensus 99.6 3.1E-14 6.7E-19 65.2 7.1 63 2-65 183-246 (343)
11 KOG0284|consensus 99.6 6.8E-15 1.5E-19 69.5 4.7 64 1-65 218-281 (464)
12 KOG0279|consensus 99.6 7.4E-14 1.6E-18 63.6 7.5 64 1-65 59-122 (315)
13 PTZ00421 coronin; Provisional 99.5 2.7E-13 5.9E-18 66.2 8.8 64 1-65 121-185 (493)
14 KOG0318|consensus 99.5 2.2E-13 4.7E-18 66.2 8.2 64 2-65 187-252 (603)
15 KOG0266|consensus 99.5 3.2E-13 7E-18 65.5 8.1 63 2-65 200-263 (456)
16 KOG1407|consensus 99.5 7.6E-14 1.6E-18 63.2 5.4 64 1-65 185-248 (313)
17 KOG0291|consensus 99.5 3.1E-13 6.7E-18 67.9 7.9 63 2-65 347-409 (893)
18 KOG0315|consensus 99.5 5.3E-13 1.1E-17 60.3 7.9 64 1-65 211-275 (311)
19 KOG0273|consensus 99.5 7.1E-13 1.5E-17 63.8 7.5 64 1-65 397-469 (524)
20 KOG1034|consensus 99.5 4.8E-13 1E-17 62.2 6.6 65 1-65 131-198 (385)
21 KOG0279|consensus 99.5 1.5E-12 3.3E-17 59.4 7.7 61 2-64 189-249 (315)
22 KOG0296|consensus 99.5 1.5E-12 3.2E-17 61.1 7.5 63 2-65 61-123 (399)
23 KOG0645|consensus 99.5 1.9E-12 4E-17 59.0 7.5 62 3-65 59-122 (312)
24 KOG0645|consensus 99.5 1.5E-12 3.3E-17 59.3 7.1 64 1-65 101-167 (312)
25 PTZ00421 coronin; Provisional 99.5 2.4E-12 5.1E-17 63.1 8.2 62 2-64 72-142 (493)
26 KOG0273|consensus 99.4 1.8E-12 4E-17 62.4 7.4 62 1-64 448-509 (524)
27 KOG0283|consensus 99.4 7E-13 1.5E-17 66.4 5.9 61 1-64 365-426 (712)
28 KOG0293|consensus 99.4 7.3E-13 1.6E-17 63.2 5.0 65 1-65 265-329 (519)
29 KOG0295|consensus 99.4 2.7E-12 5.9E-17 60.3 6.8 64 1-65 330-393 (406)
30 KOG0265|consensus 99.4 7.6E-12 1.6E-16 57.7 7.6 64 1-65 43-107 (338)
31 KOG0285|consensus 99.4 5.2E-12 1.1E-16 59.6 7.0 64 1-65 147-210 (460)
32 KOG0319|consensus 99.4 5.6E-12 1.2E-16 63.2 7.1 64 1-65 501-564 (775)
33 PTZ00420 coronin; Provisional 99.4 1.9E-11 4.2E-16 60.8 8.8 62 1-63 70-140 (568)
34 KOG0650|consensus 99.4 6.2E-12 1.3E-16 62.3 7.1 59 2-62 397-455 (733)
35 KOG0973|consensus 99.4 2.1E-12 4.6E-17 66.2 5.6 64 1-65 125-188 (942)
36 KOG2394|consensus 99.4 8.8E-13 1.9E-17 64.4 3.9 59 6-65 291-349 (636)
37 KOG0318|consensus 99.4 9.1E-12 2E-16 60.8 7.2 64 2-65 484-547 (603)
38 KOG1445|consensus 99.4 4.3E-13 9.2E-18 67.0 2.7 64 1-65 673-737 (1012)
39 KOG0295|consensus 99.4 1.5E-11 3.2E-16 57.9 7.5 63 2-65 274-351 (406)
40 PTZ00420 coronin; Provisional 99.4 3.2E-11 6.8E-16 60.0 8.8 62 2-65 122-184 (568)
41 KOG0293|consensus 99.4 1.3E-11 2.9E-16 59.1 7.0 64 1-65 220-286 (519)
42 cd00200 WD40 WD40 domain, foun 99.4 3.8E-11 8.2E-16 53.9 8.1 63 1-64 5-67 (289)
43 KOG0289|consensus 99.4 8E-12 1.7E-16 59.9 6.1 58 7-65 349-406 (506)
44 KOG0315|consensus 99.3 1.4E-11 3E-16 55.9 5.8 62 2-65 80-141 (311)
45 KOG0291|consensus 99.3 2.7E-11 5.7E-16 61.3 6.9 63 1-64 474-536 (893)
46 PF08662 eIF2A: Eukaryotic tra 99.3 1E-10 2.2E-15 51.7 7.9 57 6-65 101-160 (194)
47 KOG0288|consensus 99.3 3.1E-11 6.7E-16 57.6 6.6 59 7-65 389-448 (459)
48 KOG1273|consensus 99.3 4.8E-11 1.1E-15 55.7 6.6 59 1-61 61-119 (405)
49 KOG0283|consensus 99.3 3.1E-11 6.7E-16 60.8 6.4 60 3-64 407-467 (712)
50 KOG0284|consensus 99.3 3.3E-12 7.1E-17 60.8 2.9 62 2-64 261-322 (464)
51 KOG0264|consensus 99.3 6.4E-11 1.4E-15 56.7 7.1 62 2-64 269-332 (422)
52 KOG0319|consensus 99.3 3.7E-11 8E-16 60.5 6.6 62 3-65 461-522 (775)
53 KOG0275|consensus 99.3 1.4E-12 3.1E-17 61.0 1.4 62 4-65 262-323 (508)
54 KOG2110|consensus 99.3 1.4E-10 3.1E-15 54.7 7.5 63 2-64 170-234 (391)
55 PF00400 WD40: WD domain, G-be 99.3 2.6E-11 5.7E-16 40.8 3.9 33 1-33 7-39 (39)
56 KOG0643|consensus 99.2 3.1E-10 6.7E-15 52.1 7.9 62 1-64 48-109 (327)
57 KOG0640|consensus 99.2 3.4E-11 7.5E-16 56.2 4.9 63 3-65 259-322 (430)
58 KOG4283|consensus 99.2 7.9E-11 1.7E-15 54.7 6.0 64 1-64 184-262 (397)
59 KOG0278|consensus 99.2 1.6E-10 3.5E-15 52.7 6.8 61 2-64 140-200 (334)
60 KOG0285|consensus 99.2 9.9E-11 2.1E-15 55.5 6.2 64 1-65 273-336 (460)
61 KOG0305|consensus 99.2 5.9E-11 1.3E-15 58.0 5.4 62 1-63 297-358 (484)
62 KOG2394|consensus 99.2 1.3E-10 2.8E-15 57.2 6.5 53 5-58 332-384 (636)
63 KOG1273|consensus 99.2 6.3E-11 1.4E-15 55.4 5.0 57 8-65 26-82 (405)
64 KOG0292|consensus 99.2 2E-10 4.3E-15 59.4 7.1 64 1-65 89-152 (1202)
65 KOG0282|consensus 99.2 7E-12 1.5E-16 60.5 1.7 64 1-65 210-275 (503)
66 KOG0294|consensus 99.2 3.2E-10 6.9E-15 52.9 6.6 63 2-65 80-144 (362)
67 KOG2111|consensus 99.2 8.1E-10 1.8E-14 51.6 7.9 63 2-64 178-242 (346)
68 KOG0641|consensus 99.2 6.1E-10 1.3E-14 50.4 7.3 59 6-65 232-290 (350)
69 KOG0310|consensus 99.2 4.1E-10 8.9E-15 54.6 7.1 63 1-65 149-213 (487)
70 KOG0289|consensus 99.2 4.7E-10 1E-14 54.2 7.1 63 2-64 386-448 (506)
71 cd00200 WD40 WD40 domain, foun 99.2 1.5E-09 3.3E-14 48.8 8.5 62 3-65 217-278 (289)
72 KOG0973|consensus 99.2 4.2E-10 9.2E-15 58.3 7.0 63 2-65 66-146 (942)
73 KOG0316|consensus 99.2 3E-10 6.6E-15 51.5 5.7 63 2-65 56-118 (307)
74 KOG0296|consensus 99.2 5.3E-10 1.1E-14 52.9 6.7 61 3-65 325-385 (399)
75 KOG0643|consensus 99.2 1.1E-09 2.3E-14 50.4 7.4 64 1-65 6-69 (327)
76 KOG0269|consensus 99.2 2.8E-10 6.1E-15 57.8 5.9 61 2-62 217-277 (839)
77 KOG0292|consensus 99.2 1.8E-10 3.9E-15 59.6 5.3 63 2-65 48-110 (1202)
78 KOG0313|consensus 99.1 3E-10 6.5E-15 53.9 5.6 59 1-60 341-401 (423)
79 KOG0276|consensus 99.1 6.6E-11 1.4E-15 59.1 3.5 64 1-65 179-244 (794)
80 KOG0316|consensus 99.1 7.6E-10 1.7E-14 50.2 6.5 63 1-64 13-75 (307)
81 KOG1063|consensus 99.1 2.9E-10 6.2E-15 57.2 5.5 64 1-65 568-635 (764)
82 KOG0265|consensus 99.1 6E-10 1.3E-14 51.7 6.1 54 1-55 86-139 (338)
83 KOG0306|consensus 99.1 3.5E-10 7.6E-15 57.5 5.5 63 1-64 546-608 (888)
84 KOG1063|consensus 99.1 5.9E-10 1.3E-14 56.2 6.2 64 1-65 521-589 (764)
85 KOG0278|consensus 99.1 8.1E-10 1.8E-14 50.5 6.1 59 7-65 226-284 (334)
86 KOG0302|consensus 99.1 1.2E-09 2.6E-14 52.1 6.7 61 2-63 299-362 (440)
87 KOG0308|consensus 99.1 1.5E-09 3.3E-14 54.5 7.3 63 1-64 209-271 (735)
88 KOG0277|consensus 99.1 6E-10 1.3E-14 50.9 5.4 60 2-62 101-161 (311)
89 KOG0772|consensus 99.1 1.4E-10 3E-15 57.0 3.5 63 3-65 360-426 (641)
90 KOG0322|consensus 99.1 3.2E-10 6.9E-15 52.0 4.2 57 7-64 253-309 (323)
91 KOG1009|consensus 99.1 1.6E-10 3.4E-15 55.1 3.2 63 2-65 120-182 (434)
92 KOG1274|consensus 99.1 1.2E-09 2.5E-14 56.4 6.3 63 1-63 134-203 (933)
93 KOG1446|consensus 99.1 2.4E-09 5.1E-14 49.8 6.8 61 1-64 96-156 (311)
94 KOG0306|consensus 99.1 9.8E-10 2.1E-14 56.0 5.8 62 3-65 590-651 (888)
95 KOG1446|consensus 99.1 2.4E-09 5.3E-14 49.7 6.6 57 9-65 236-292 (311)
96 KOG2096|consensus 99.1 1.4E-09 3E-14 51.2 5.9 61 1-63 82-147 (420)
97 PLN00181 protein SPA1-RELATED; 99.1 8.4E-09 1.8E-13 53.3 8.9 61 2-64 572-634 (793)
98 KOG1310|consensus 99.1 2E-09 4.3E-14 53.6 6.3 59 1-59 46-104 (758)
99 KOG0303|consensus 99.1 7.2E-10 1.6E-14 53.1 4.7 63 1-65 127-190 (472)
100 KOG0268|consensus 99.0 5E-10 1.1E-14 53.1 4.0 64 2-65 269-332 (433)
101 KOG1408|consensus 99.0 1.5E-09 3.3E-14 55.5 5.5 62 3-65 76-139 (1080)
102 KOG0299|consensus 99.0 2.7E-09 5.8E-14 51.7 6.0 57 3-60 200-256 (479)
103 KOG0275|consensus 99.0 3.2E-10 6.9E-15 53.5 2.8 62 3-65 304-365 (508)
104 KOG2096|consensus 99.0 2.1E-09 4.5E-14 50.6 5.3 35 1-35 274-308 (420)
105 KOG0303|consensus 99.0 1.4E-09 3.1E-14 52.1 4.7 61 2-63 78-146 (472)
106 KOG0300|consensus 99.0 3.1E-09 6.6E-14 50.2 5.7 64 1-65 144-207 (481)
107 KOG1407|consensus 99.0 8.4E-09 1.8E-13 47.4 6.8 61 2-64 61-122 (313)
108 PLN00181 protein SPA1-RELATED; 99.0 1.4E-08 3.1E-13 52.4 8.4 59 6-65 533-593 (793)
109 KOG0282|consensus 99.0 3E-09 6.6E-14 51.8 5.6 54 7-61 434-487 (503)
110 KOG1007|consensus 99.0 3.5E-09 7.5E-14 49.3 5.6 61 3-64 212-274 (370)
111 KOG1009|consensus 99.0 3.7E-09 8.1E-14 50.7 5.8 64 1-65 61-140 (434)
112 KOG0640|consensus 99.0 7.4E-10 1.6E-14 51.9 3.4 61 2-64 169-232 (430)
113 KOG0264|consensus 99.0 5.2E-09 1.1E-13 50.4 6.1 64 1-64 312-389 (422)
114 KOG0974|consensus 99.0 5.4E-09 1.2E-13 54.5 6.4 58 1-59 171-229 (967)
115 KOG0302|consensus 99.0 4.2E-09 9.1E-14 50.3 5.6 63 2-65 254-319 (440)
116 KOG0281|consensus 99.0 2.2E-09 4.7E-14 51.1 4.5 56 1-59 233-288 (499)
117 KOG1538|consensus 99.0 1.6E-09 3.4E-14 55.2 4.2 60 1-63 49-108 (1081)
118 KOG0269|consensus 99.0 2E-09 4.3E-14 54.9 4.5 61 4-65 175-237 (839)
119 KOG0267|consensus 99.0 2.5E-09 5.4E-14 54.3 4.6 64 1-65 108-171 (825)
120 PF08662 eIF2A: Eukaryotic tra 98.9 2.8E-08 6.2E-13 44.0 7.4 57 5-65 59-117 (194)
121 KOG0267|consensus 98.9 4.8E-10 1E-14 56.8 2.0 63 1-64 66-128 (825)
122 KOG0281|consensus 98.9 2.1E-09 4.6E-14 51.1 3.8 59 1-64 316-374 (499)
123 KOG0772|consensus 98.9 3.8E-09 8.2E-14 52.2 4.7 60 6-65 318-381 (641)
124 KOG0276|consensus 98.9 9.6E-09 2.1E-13 51.9 6.0 63 1-64 223-285 (794)
125 KOG0646|consensus 98.9 4.2E-09 9.2E-14 51.1 4.6 59 6-65 82-140 (476)
126 KOG0313|consensus 98.9 2.2E-08 4.7E-13 48.0 6.4 62 1-65 256-317 (423)
127 KOG0647|consensus 98.9 5.2E-08 1.1E-12 45.7 7.4 57 3-61 70-126 (347)
128 KOG1524|consensus 98.9 7.8E-09 1.7E-13 51.5 4.8 57 2-60 183-239 (737)
129 KOG0646|consensus 98.9 4.1E-09 8.9E-14 51.2 3.8 57 2-59 272-330 (476)
130 KOG0771|consensus 98.9 5E-09 1.1E-13 50.2 3.9 56 9-65 148-203 (398)
131 KOG0270|consensus 98.9 3.8E-09 8.1E-14 51.1 3.5 58 3-61 241-299 (463)
132 KOG0308|consensus 98.9 3.7E-08 8E-13 49.9 7.0 62 3-65 169-230 (735)
133 KOG0647|consensus 98.9 1.6E-08 3.5E-13 47.3 5.4 60 6-65 28-89 (347)
134 KOG0300|consensus 98.9 5E-09 1.1E-13 49.5 3.5 64 1-65 268-331 (481)
135 KOG0294|consensus 98.9 3.9E-08 8.4E-13 46.3 6.3 61 1-63 123-183 (362)
136 KOG1036|consensus 98.8 2.6E-08 5.7E-13 46.5 5.0 57 7-64 234-290 (323)
137 KOG4227|consensus 98.8 2.7E-08 5.9E-13 48.2 5.2 64 2-65 53-122 (609)
138 KOG1538|consensus 98.8 6E-08 1.3E-12 49.8 6.4 57 7-65 14-70 (1081)
139 KOG2106|consensus 98.8 2.6E-07 5.6E-12 46.0 8.1 61 5-65 447-508 (626)
140 KOG0305|consensus 98.8 1.1E-07 2.5E-12 47.1 6.7 62 2-65 340-404 (484)
141 KOG1523|consensus 98.8 7.6E-08 1.7E-12 45.4 5.7 63 1-64 51-116 (361)
142 KOG1332|consensus 98.7 5.4E-08 1.2E-12 44.6 4.7 61 1-62 52-116 (299)
143 KOG0639|consensus 98.7 5.3E-08 1.1E-12 48.4 4.8 56 8-64 512-567 (705)
144 KOG0277|consensus 98.7 3.2E-07 7E-12 42.4 6.9 57 2-59 144-201 (311)
145 KOG0290|consensus 98.7 1.8E-07 3.8E-12 43.9 5.7 36 2-37 193-229 (364)
146 KOG0274|consensus 98.7 5.5E-07 1.2E-11 45.4 7.5 57 1-58 245-301 (537)
147 KOG1524|consensus 98.7 2.4E-08 5.1E-13 49.9 2.6 61 2-64 101-161 (737)
148 KOG0771|consensus 98.7 4.3E-07 9.4E-12 43.9 6.6 60 6-65 282-341 (398)
149 KOG0268|consensus 98.7 2.3E-08 4.9E-13 47.8 2.3 57 1-58 62-119 (433)
150 KOG0310|consensus 98.7 5.6E-07 1.2E-11 44.3 6.9 60 1-61 106-166 (487)
151 KOG0307|consensus 98.7 8.9E-08 1.9E-12 50.6 4.5 60 1-61 249-309 (1049)
152 KOG2139|consensus 98.7 5.7E-07 1.2E-11 43.3 6.7 58 6-64 196-254 (445)
153 KOG2110|consensus 98.6 1.1E-06 2.4E-11 42.2 7.6 58 7-65 131-190 (391)
154 PRK05137 tolB translocation pr 98.6 1.1E-06 2.4E-11 43.1 7.4 59 4-64 200-261 (435)
155 KOG2055|consensus 98.6 1.7E-06 3.8E-11 42.7 7.9 60 6-65 345-404 (514)
156 PRK01742 tolB translocation pr 98.6 7.7E-07 1.7E-11 43.6 6.8 60 3-64 201-263 (429)
157 KOG0301|consensus 98.6 9.3E-07 2E-11 45.3 7.1 61 1-64 175-235 (745)
158 KOG0274|consensus 98.6 1E-06 2.2E-11 44.5 7.1 55 2-59 328-382 (537)
159 KOG1539|consensus 98.6 4.2E-07 9E-12 47.3 5.5 62 3-65 491-593 (910)
160 KOG1408|consensus 98.6 4.6E-07 1E-11 47.0 5.5 62 3-65 639-700 (1080)
161 COG4946 Uncharacterized protei 98.6 2.9E-06 6.3E-11 42.4 7.9 60 4-64 400-459 (668)
162 COG2319 FOG: WD40 repeat [Gene 98.5 3.4E-06 7.4E-11 39.7 8.0 59 2-61 152-211 (466)
163 KOG0639|consensus 98.5 6.2E-08 1.3E-12 48.2 2.2 62 1-64 547-608 (705)
164 KOG2445|consensus 98.5 2.3E-06 4.9E-11 40.6 7.0 63 1-65 219-305 (361)
165 PRK02889 tolB translocation pr 98.5 2.8E-06 6E-11 41.7 7.4 59 4-64 194-255 (427)
166 KOG1272|consensus 98.5 4.4E-07 9.6E-12 44.8 4.7 59 2-62 290-348 (545)
167 KOG4328|consensus 98.5 5.6E-07 1.2E-11 44.2 4.9 61 4-65 321-386 (498)
168 smart00320 WD40 WD40 repeats. 98.5 5.2E-07 1.1E-11 28.9 3.6 31 3-33 10-40 (40)
169 KOG1034|consensus 98.5 4.3E-07 9.3E-12 43.2 4.3 36 1-36 177-212 (385)
170 KOG1963|consensus 98.5 1.8E-06 3.8E-11 45.0 6.6 61 4-65 204-268 (792)
171 KOG0321|consensus 98.5 3.8E-07 8.3E-12 46.3 4.3 60 3-63 98-159 (720)
172 KOG1332|consensus 98.5 8.4E-07 1.8E-11 40.9 4.9 63 1-64 203-272 (299)
173 KOG2139|consensus 98.5 3E-06 6.4E-11 41.0 6.7 58 6-64 239-296 (445)
174 KOG2445|consensus 98.5 6.4E-06 1.4E-10 39.1 7.6 56 3-59 11-71 (361)
175 KOG0649|consensus 98.5 2.3E-06 5E-11 39.6 6.0 45 1-45 152-196 (325)
176 KOG1445|consensus 98.5 1.1E-06 2.5E-11 45.2 5.5 58 7-65 130-187 (1012)
177 KOG2919|consensus 98.5 1.5E-06 3.2E-11 41.5 5.4 55 9-64 301-356 (406)
178 KOG0299|consensus 98.5 3.7E-06 8.1E-11 41.4 6.8 57 6-64 381-441 (479)
179 KOG0288|consensus 98.4 5E-07 1.1E-11 43.9 3.7 58 3-61 217-274 (459)
180 PF02239 Cytochrom_D1: Cytochr 98.4 9.5E-06 2.1E-10 39.4 8.0 54 9-64 40-93 (369)
181 KOG1274|consensus 98.4 3.3E-06 7.2E-11 44.5 6.5 60 5-65 96-155 (933)
182 KOG0644|consensus 98.4 5.8E-08 1.3E-12 50.6 0.3 59 1-60 228-286 (1113)
183 KOG1963|consensus 98.4 2.3E-06 4.9E-11 44.6 5.7 61 2-64 248-308 (792)
184 KOG2055|consensus 98.4 6E-06 1.3E-10 40.9 6.7 55 6-61 214-270 (514)
185 KOG0644|consensus 98.4 1.7E-07 3.7E-12 49.0 1.7 58 1-59 186-243 (1113)
186 KOG2919|consensus 98.4 7.6E-06 1.7E-10 39.2 6.7 60 5-65 207-267 (406)
187 KOG0641|consensus 98.4 1.5E-05 3.2E-10 36.7 7.4 61 3-64 271-335 (350)
188 KOG0642|consensus 98.4 2.9E-06 6.2E-11 42.7 5.5 62 2-64 341-412 (577)
189 KOG0290|consensus 98.4 1.7E-06 3.7E-11 40.8 4.6 59 1-59 283-346 (364)
190 PF11768 DUF3312: Protein of u 98.4 8.9E-06 1.9E-10 41.1 7.2 58 4-64 258-315 (545)
191 KOG4378|consensus 98.4 2.5E-06 5.3E-11 42.8 5.1 61 2-64 205-266 (673)
192 KOG1188|consensus 98.4 2.7E-06 6E-11 40.7 4.9 57 3-60 163-223 (376)
193 KOG4283|consensus 98.3 6.9E-06 1.5E-10 39.0 6.0 58 6-64 144-204 (397)
194 PRK00178 tolB translocation pr 98.3 1.2E-05 2.6E-10 39.4 7.1 59 4-64 197-258 (430)
195 PRK03629 tolB translocation pr 98.3 1.3E-05 2.8E-10 39.5 7.1 57 6-64 199-258 (429)
196 KOG0307|consensus 98.3 7.3E-07 1.6E-11 47.5 3.0 58 2-59 113-172 (1049)
197 TIGR03866 PQQ_ABC_repeats PQQ- 98.3 1.9E-05 4.1E-10 36.5 7.3 54 9-64 210-264 (300)
198 PRK04922 tolB translocation pr 98.3 7.5E-06 1.6E-10 40.3 6.0 59 4-64 202-263 (433)
199 KOG4497|consensus 98.3 2.1E-05 4.7E-10 37.9 6.7 58 5-64 91-149 (447)
200 KOG4547|consensus 98.3 2.4E-05 5.3E-10 39.6 7.1 52 5-59 144-195 (541)
201 PF00400 WD40: WD domain, G-be 98.3 4.8E-06 1E-10 27.6 3.6 27 38-65 2-28 (39)
202 TIGR02800 propeller_TolB tol-p 98.3 2.2E-05 4.9E-10 38.2 6.9 57 6-64 190-249 (417)
203 TIGR03866 PQQ_ABC_repeats PQQ- 98.2 2.6E-05 5.7E-10 36.0 6.9 51 6-58 249-300 (300)
204 KOG1272|consensus 98.2 1.6E-06 3.4E-11 43.0 2.6 58 7-65 253-310 (545)
205 KOG0301|consensus 98.2 5.8E-05 1.3E-09 39.3 7.9 60 2-64 216-275 (745)
206 KOG0642|consensus 98.2 4.8E-06 1E-10 41.9 4.0 61 4-65 293-361 (577)
207 PRK03629 tolB translocation pr 98.2 3.7E-05 8.1E-10 38.0 7.0 55 8-64 245-302 (429)
208 PRK01742 tolB translocation pr 98.2 2.1E-05 4.6E-10 38.8 6.0 55 8-64 250-307 (429)
209 PRK01029 tolB translocation pr 98.2 4.8E-05 1E-09 37.7 7.0 56 7-64 328-386 (428)
210 PRK02889 tolB translocation pr 98.1 2.1E-05 4.7E-10 38.8 5.6 56 7-64 241-299 (427)
211 PRK04792 tolB translocation pr 98.1 4E-05 8.7E-10 38.1 6.4 56 7-64 219-277 (448)
212 KOG0270|consensus 98.1 4.5E-05 9.9E-10 37.8 6.3 58 3-61 284-342 (463)
213 KOG4328|consensus 98.1 5E-05 1.1E-09 37.8 6.3 55 4-59 185-245 (498)
214 PF12894 Apc4_WD40: Anaphase-p 98.1 2.9E-05 6.4E-10 27.2 5.4 30 6-35 12-41 (47)
215 KOG1523|consensus 98.1 6.1E-05 1.3E-09 36.2 6.2 59 6-65 11-72 (361)
216 KOG4378|consensus 98.1 8.1E-05 1.8E-09 37.8 6.8 64 1-64 117-180 (673)
217 PRK05137 tolB translocation pr 98.1 0.00013 2.7E-09 36.2 7.5 57 6-64 290-349 (435)
218 KOG2048|consensus 98.1 0.00015 3.2E-09 37.7 7.7 57 6-64 70-126 (691)
219 KOG1007|consensus 98.1 1.4E-05 3.1E-10 37.9 3.9 59 5-64 170-230 (370)
220 KOG0649|consensus 98.0 0.00014 3.1E-09 34.0 6.5 49 7-56 116-164 (325)
221 KOG1036|consensus 98.0 8.5E-05 1.8E-09 35.4 5.7 53 5-59 13-65 (323)
222 KOG4497|consensus 98.0 7.9E-05 1.7E-09 36.1 5.6 57 7-64 50-107 (447)
223 KOG0322|consensus 98.0 8.7E-06 1.9E-10 38.1 2.4 34 1-34 289-322 (323)
224 KOG2041|consensus 98.0 1.9E-05 4.2E-10 41.6 3.8 64 1-64 67-131 (1189)
225 KOG1409|consensus 97.9 3.7E-05 8.1E-10 37.2 4.1 53 2-55 194-247 (404)
226 PRK04922 tolB translocation pr 97.9 0.00016 3.6E-09 35.8 6.4 55 8-64 250-307 (433)
227 PRK00178 tolB translocation pr 97.9 0.00031 6.8E-09 34.7 6.9 55 8-64 245-302 (430)
228 KOG2315|consensus 97.9 0.00018 4E-09 36.7 5.9 55 8-65 314-371 (566)
229 KOG3914|consensus 97.9 9.6E-05 2.1E-09 36.2 4.7 60 2-61 148-207 (390)
230 KOG2106|consensus 97.8 0.00072 1.6E-08 34.6 7.8 56 6-63 247-302 (626)
231 KOG3881|consensus 97.8 0.00026 5.7E-09 34.8 5.7 59 6-65 248-307 (412)
232 KOG4640|consensus 97.8 0.00033 7.1E-09 36.4 6.1 56 7-64 22-78 (665)
233 KOG2048|consensus 97.8 0.00079 1.7E-08 35.2 7.4 58 6-63 26-84 (691)
234 KOG0280|consensus 97.8 0.00054 1.2E-08 32.8 6.4 62 2-64 162-227 (339)
235 KOG4547|consensus 97.7 0.00064 1.4E-08 34.8 6.5 60 4-64 101-160 (541)
236 PRK04792 tolB translocation pr 97.7 0.0007 1.5E-08 33.9 6.7 54 9-64 265-321 (448)
237 TIGR02800 propeller_TolB tol-p 97.7 0.0011 2.4E-08 32.6 7.5 55 8-64 280-337 (417)
238 PRK01029 tolB translocation pr 97.7 0.00064 1.4E-08 33.9 6.3 56 7-64 186-246 (428)
239 KOG0650|consensus 97.6 7.9E-05 1.7E-09 38.4 2.8 58 6-64 608-666 (733)
240 KOG1334|consensus 97.6 6E-05 1.3E-09 37.9 2.3 57 2-59 388-447 (559)
241 KOG4640|consensus 97.6 0.00056 1.2E-08 35.6 5.5 53 6-58 62-115 (665)
242 KOG1334|consensus 97.6 0.00012 2.5E-09 37.0 3.1 59 1-59 138-196 (559)
243 KOG3881|consensus 97.6 0.001 2.3E-08 32.9 6.1 58 7-65 204-264 (412)
244 KOG2321|consensus 97.6 0.0012 2.6E-08 34.3 6.4 53 7-59 230-282 (703)
245 KOG1240|consensus 97.6 0.0016 3.5E-08 36.5 7.1 62 2-64 1045-1114(1431)
246 KOG2079|consensus 97.6 0.0018 4E-08 35.9 7.0 41 5-45 130-170 (1206)
247 KOG3914|consensus 97.6 0.00018 3.8E-09 35.3 3.2 42 2-44 191-232 (390)
248 KOG1188|consensus 97.5 0.00095 2.1E-08 32.6 5.5 62 2-63 67-132 (376)
249 KOG1587|consensus 97.5 0.0016 3.4E-08 33.8 6.4 55 6-60 243-303 (555)
250 PRK11028 6-phosphogluconolacto 97.5 0.0012 2.5E-08 31.6 5.8 53 10-64 232-289 (330)
251 COG4946 Uncharacterized protei 97.5 0.0021 4.5E-08 33.0 6.4 57 6-64 444-504 (668)
252 COG2319 FOG: WD40 repeat [Gene 97.5 0.0022 4.9E-08 30.5 8.5 60 3-64 240-300 (466)
253 PRK04043 tolB translocation pr 97.5 0.0029 6.3E-08 31.7 7.4 55 8-64 235-292 (419)
254 KOG4227|consensus 97.5 0.0021 4.5E-08 32.3 6.2 61 4-64 104-165 (609)
255 PRK04043 tolB translocation pr 97.4 0.0034 7.5E-08 31.5 8.3 56 7-64 189-248 (419)
256 KOG4532|consensus 97.4 0.003 6.4E-08 30.3 6.0 54 7-60 205-262 (344)
257 KOG1587|consensus 97.4 0.0013 2.8E-08 34.1 5.0 59 3-62 396-455 (555)
258 KOG2111|consensus 97.4 0.0011 2.4E-08 32.1 4.5 31 6-36 227-257 (346)
259 KOG2314|consensus 97.3 0.0013 2.7E-08 34.2 4.8 57 8-65 495-554 (698)
260 KOG4190|consensus 97.3 0.00027 5.9E-09 36.6 2.6 62 2-64 732-800 (1034)
261 KOG0280|consensus 97.3 0.0027 5.8E-08 30.6 5.3 54 4-59 209-264 (339)
262 KOG4714|consensus 97.3 0.00012 2.5E-09 34.5 0.9 52 8-59 182-234 (319)
263 KOG3621|consensus 97.3 0.00097 2.1E-08 35.2 4.0 59 7-65 78-141 (726)
264 PF15492 Nbas_N: Neuroblastoma 97.3 0.0023 5.1E-08 30.4 4.9 40 5-44 229-268 (282)
265 KOG1832|consensus 97.2 0.0027 5.9E-08 35.1 5.4 60 3-63 1099-1158(1516)
266 PF04762 IKI3: IKI3 family; I 97.2 0.0097 2.1E-07 32.9 7.4 57 6-64 76-136 (928)
267 PF08553 VID27: VID27 cytoplas 97.2 0.0045 9.8E-08 33.5 6.1 46 18-64 589-634 (794)
268 PF07433 DUF1513: Protein of u 97.2 0.0066 1.4E-07 29.4 6.1 53 11-64 56-114 (305)
269 KOG1310|consensus 97.2 0.0032 7E-08 32.9 5.2 56 8-64 626-682 (758)
270 KOG1240|consensus 97.2 0.0063 1.4E-07 34.5 6.4 56 4-59 1194-1249(1431)
271 KOG4714|consensus 97.2 0.00033 7.2E-09 33.1 1.7 36 1-36 219-255 (319)
272 PF00930 DPPIV_N: Dipeptidyl p 97.1 0.0052 1.1E-07 30.0 5.6 58 6-64 43-116 (353)
273 KOG2066|consensus 97.1 0.009 2E-07 32.4 6.6 42 16-59 82-123 (846)
274 PRK11028 6-phosphogluconolacto 97.1 0.0079 1.7E-07 28.9 7.6 56 7-64 36-95 (330)
275 KOG0321|consensus 97.0 0.00066 1.4E-08 35.5 2.2 35 2-36 141-176 (720)
276 COG0823 TolB Periplasmic compo 97.0 0.0026 5.6E-08 32.0 4.0 54 9-64 241-297 (425)
277 KOG2321|consensus 97.0 0.012 2.5E-07 31.0 6.0 58 6-63 176-243 (703)
278 COG2706 3-carboxymuconate cycl 96.9 0.015 3.3E-07 28.6 6.6 57 8-64 147-206 (346)
279 KOG1517|consensus 96.9 0.013 2.9E-07 33.0 6.0 64 2-65 1251-1321(1387)
280 KOG2314|consensus 96.9 0.015 3.3E-07 30.6 5.9 58 7-64 251-321 (698)
281 KOG1645|consensus 96.8 0.0061 1.3E-07 30.6 4.4 58 3-62 191-249 (463)
282 KOG1354|consensus 96.8 0.00094 2E-08 32.8 1.7 59 7-65 215-289 (433)
283 KOG3617|consensus 96.8 0.0011 2.4E-08 36.2 1.8 57 8-65 62-118 (1416)
284 KOG2315|consensus 96.7 0.027 5.9E-07 29.5 6.8 56 5-64 270-327 (566)
285 PF04762 IKI3: IKI3 family; I 96.7 0.0096 2.1E-07 32.9 5.0 57 7-65 211-273 (928)
286 KOG1064|consensus 96.7 0.0041 9E-08 36.6 3.6 36 3-38 2334-2369(2439)
287 PF11768 DUF3312: Protein of u 96.7 0.024 5.2E-07 29.7 5.9 28 8-35 302-329 (545)
288 TIGR02658 TTQ_MADH_Hv methylam 96.5 0.035 7.6E-07 27.6 8.4 55 8-64 250-315 (352)
289 PF02239 Cytochrom_D1: Cytochr 96.5 0.019 4.2E-07 28.5 4.7 55 9-63 272-330 (369)
290 PF10282 Lactonase: Lactonase, 96.4 0.037 8E-07 27.1 8.7 57 7-64 246-307 (345)
291 COG0823 TolB Periplasmic compo 96.4 0.016 3.5E-07 29.4 4.3 53 10-64 286-341 (425)
292 KOG2695|consensus 96.4 0.012 2.6E-07 29.2 3.6 42 4-45 297-342 (425)
293 TIGR02658 TTQ_MADH_Hv methylam 96.3 0.048 1E-06 27.2 7.0 52 13-64 53-120 (352)
294 PRK13616 lipoprotein LpqB; Pro 96.3 0.044 9.5E-07 29.1 5.5 53 8-64 399-463 (591)
295 PF14761 HPS3_N: Hermansky-Pud 96.2 0.04 8.6E-07 25.6 5.6 46 18-65 29-76 (215)
296 KOG1409|consensus 96.2 0.018 3.9E-07 28.6 3.8 63 1-63 20-83 (404)
297 PF15390 DUF4613: Domain of un 96.2 0.075 1.6E-06 28.4 6.0 53 10-64 117-171 (671)
298 KOG0974|consensus 96.1 0.075 1.6E-06 29.8 5.9 59 3-64 216-274 (967)
299 PF04053 Coatomer_WDAD: Coatom 96.1 0.061 1.3E-06 27.6 5.3 44 17-64 117-160 (443)
300 KOG1920|consensus 95.9 0.14 3.1E-06 29.5 7.2 57 6-64 69-125 (1265)
301 PF15492 Nbas_N: Neuroblastoma 95.7 0.087 1.9E-06 25.5 4.8 29 8-36 46-74 (282)
302 KOG3617|consensus 95.7 0.042 9.1E-07 30.8 4.1 34 3-36 99-132 (1416)
303 PF07676 PD40: WD40-like Beta 95.7 0.024 5.2E-07 18.6 3.5 18 47-64 7-24 (39)
304 PLN02919 haloacid dehalogenase 95.6 0.19 4.1E-06 28.7 7.5 57 8-64 806-874 (1057)
305 PF14655 RAB3GAP2_N: Rab3 GTPa 95.6 0.11 2.3E-06 26.6 5.0 40 6-45 308-347 (415)
306 PF10313 DUF2415: Uncharacteri 95.6 0.031 6.8E-07 19.3 4.7 31 6-36 1-34 (43)
307 KOG2395|consensus 95.5 0.073 1.6E-06 28.2 4.4 47 17-64 441-487 (644)
308 PF10282 Lactonase: Lactonase, 95.5 0.12 2.7E-06 25.4 8.7 58 7-64 88-159 (345)
309 KOG2041|consensus 95.4 0.19 4.1E-06 27.9 5.7 58 6-64 15-87 (1189)
310 COG5170 CDC55 Serine/threonine 95.4 0.011 2.4E-07 29.1 1.3 59 7-65 223-297 (460)
311 KOG4499|consensus 95.2 0.14 3.1E-06 24.6 6.2 43 14-57 220-262 (310)
312 COG2706 3-carboxymuconate cycl 95.2 0.17 3.6E-06 25.3 6.1 57 8-65 91-161 (346)
313 KOG3621|consensus 95.2 0.087 1.9E-06 28.6 4.1 33 4-36 123-155 (726)
314 PF00930 DPPIV_N: Dipeptidyl p 95.2 0.084 1.8E-06 26.0 3.9 36 27-64 23-58 (353)
315 PF07569 Hira: TUP1-like enhan 95.0 0.15 3.3E-06 23.7 6.2 50 15-64 20-82 (219)
316 COG5354 Uncharacterized protei 94.8 0.19 4.1E-06 26.5 4.6 56 6-62 72-145 (561)
317 KOG1912|consensus 94.8 0.14 3.1E-06 28.5 4.3 57 2-59 52-120 (1062)
318 PF02897 Peptidase_S9_N: Proly 94.7 0.25 5.5E-06 24.8 7.5 54 9-64 127-185 (414)
319 PF11715 Nup160: Nucleoporin N 94.7 0.3 6.5E-06 25.6 6.0 36 8-43 217-256 (547)
320 COG3490 Uncharacterized protei 94.2 0.32 7E-06 24.1 5.6 52 12-64 120-177 (366)
321 KOG3630|consensus 94.0 0.7 1.5E-05 27.2 6.1 59 6-64 199-259 (1405)
322 PF08450 SGL: SMP-30/Gluconola 93.5 0.38 8.3E-06 22.4 7.2 56 6-64 86-149 (246)
323 PF14583 Pectate_lyase22: Olig 93.1 0.18 3.9E-06 25.6 2.8 56 6-62 36-94 (386)
324 COG3386 Gluconolactonase [Carb 93.1 0.55 1.2E-05 23.2 5.6 56 8-64 113-178 (307)
325 PF07433 DUF1513: Protein of u 92.7 0.66 1.4E-05 23.0 7.6 40 5-44 216-256 (305)
326 PF08450 SGL: SMP-30/Gluconola 92.7 0.53 1.2E-05 21.9 8.8 54 8-63 186-240 (246)
327 PRK02888 nitrous-oxide reducta 92.7 0.95 2.1E-05 24.8 6.8 36 27-64 296-336 (635)
328 KOG0309|consensus 92.6 0.47 1E-05 26.6 3.9 55 2-57 111-167 (1081)
329 PF04841 Vps16_N: Vps16, N-ter 92.6 0.78 1.7E-05 23.5 8.1 55 6-60 217-271 (410)
330 KOG1275|consensus 92.5 1.2 2.5E-05 25.7 5.2 46 16-64 186-231 (1118)
331 KOG0309|consensus 92.5 0.09 1.9E-06 29.1 1.4 60 2-62 198-259 (1081)
332 COG5167 VID27 Protein involved 92.4 0.57 1.2E-05 25.2 4.0 47 17-64 573-619 (776)
333 TIGR02171 Fb_sc_TIGR02171 Fibr 92.4 1.2 2.7E-05 25.5 5.4 33 4-36 348-386 (912)
334 KOG1354|consensus 92.2 0.55 1.2E-05 23.9 3.6 29 7-35 27-55 (433)
335 KOG1920|consensus 91.9 1 2.3E-05 26.5 4.7 55 9-65 199-258 (1265)
336 COG5354 Uncharacterized protei 91.8 1.2 2.5E-05 23.9 5.5 57 4-64 273-331 (561)
337 PF14870 PSII_BNR: Photosynthe 91.8 0.88 1.9E-05 22.5 8.0 56 6-63 145-201 (302)
338 KOG1517|consensus 91.4 1.9 4.1E-05 25.5 5.4 45 16-61 1220-1269(1387)
339 KOG2377|consensus 91.2 1.4 3E-05 23.6 5.5 54 5-59 66-123 (657)
340 PRK10115 protease 2; Provision 91.2 1.6 3.4E-05 24.1 6.8 54 7-63 128-186 (686)
341 KOG0882|consensus 91.1 0.24 5.2E-06 25.9 1.9 38 6-43 202-239 (558)
342 PF03088 Str_synth: Strictosid 91.1 0.56 1.2E-05 18.9 4.4 37 26-64 36-72 (89)
343 PRK13616 lipoprotein LpqB; Pro 90.5 1.7 3.8E-05 23.6 5.1 55 7-63 351-411 (591)
344 PLN02919 haloacid dehalogenase 90.5 2.3 5E-05 24.9 5.6 33 7-39 860-892 (1057)
345 TIGR02171 Fb_sc_TIGR02171 Fibr 90.4 2 4.4E-05 24.7 4.9 36 27-64 329-365 (912)
346 KOG1064|consensus 90.4 1.5 3.3E-05 27.5 4.5 55 7-61 2210-2264(2439)
347 KOG0882|consensus 88.8 2.3 5.1E-05 22.6 4.8 61 4-64 143-217 (558)
348 KOG4532|consensus 88.8 1.9 4.1E-05 21.5 6.7 29 8-36 161-189 (344)
349 PF01436 NHL: NHL repeat; Int 88.6 0.48 1E-05 14.5 3.6 23 9-31 5-27 (28)
350 PF05787 DUF839: Bacterial pro 88.5 2.5 5.5E-05 22.7 6.3 19 46-64 499-517 (524)
351 PF06977 SdiA-regulated: SdiA- 88.4 1.8 3.9E-05 20.9 7.7 59 5-64 21-80 (248)
352 COG3204 Uncharacterized protei 88.1 2.2 4.7E-05 21.4 6.2 39 5-43 85-123 (316)
353 KOG2695|consensus 88.0 0.5 1.1E-05 24.0 1.6 32 6-37 253-284 (425)
354 PF06977 SdiA-regulated: SdiA- 87.6 2.1 4.5E-05 20.7 6.6 58 6-64 171-237 (248)
355 PF10584 Proteasome_A_N: Prote 87.1 0.16 3.4E-06 15.2 -0.2 8 55-62 7-14 (23)
356 COG5170 CDC55 Serine/threonine 86.8 2.8 6.2E-05 21.3 3.7 30 6-35 27-56 (460)
357 KOG1645|consensus 86.5 3.3 7.1E-05 21.8 4.2 32 6-37 236-268 (463)
358 KOG2066|consensus 85.8 4.8 0.00011 23.1 6.4 58 4-64 159-221 (846)
359 COG3211 PhoX Predicted phospha 85.7 4.3 9.4E-05 22.4 5.4 56 9-64 503-569 (616)
360 PF10168 Nup88: Nuclear pore c 85.0 5.1 0.00011 22.6 5.7 33 5-37 146-181 (717)
361 KOG4649|consensus 84.3 3.8 8.1E-05 20.5 5.8 33 13-45 101-133 (354)
362 PF12234 Rav1p_C: RAVE protein 83.3 6 0.00013 22.1 6.8 60 5-64 72-144 (631)
363 TIGR02276 beta_rpt_yvtn 40-res 83.2 1.3 2.8E-05 14.3 5.8 31 15-45 1-32 (42)
364 PF12566 DUF3748: Protein of u 82.3 1.7 3.7E-05 18.6 1.7 22 12-33 74-95 (122)
365 PF14783 BBS2_Mid: Ciliary BBS 82.1 3 6.4E-05 17.7 7.7 27 9-35 6-33 (111)
366 TIGR03300 assembly_YfgL outer 81.9 5 0.00011 20.2 5.5 29 17-45 320-348 (377)
367 TIGR02604 Piru_Ver_Nterm putat 79.2 6.7 0.00014 19.9 6.1 56 8-65 126-200 (367)
368 smart00564 PQQ beta-propeller 79.0 1.8 3.8E-05 13.2 3.5 22 19-40 8-29 (33)
369 KOG2247|consensus 78.0 6.4 0.00014 21.5 3.2 53 11-64 123-175 (615)
370 PF10647 Gmad1: Lipoprotein Lp 76.6 7 0.00015 18.8 6.6 58 7-64 67-127 (253)
371 KOG1912|consensus 76.6 7 0.00015 22.7 3.2 43 19-62 439-481 (1062)
372 TIGR03606 non_repeat_PQQ dehyd 75.7 10 0.00022 20.3 7.0 54 7-60 31-90 (454)
373 KOG4190|consensus 75.3 4.2 9.2E-05 22.5 2.2 38 7-44 878-915 (1034)
374 PF12234 Rav1p_C: RAVE protein 74.7 13 0.00028 20.9 7.1 44 21-64 45-90 (631)
375 PF01011 PQQ: PQQ enzyme repea 74.6 3 6.4E-05 13.6 3.5 25 20-44 3-27 (38)
376 PF00780 CNH: CNH domain; Int 73.1 8.8 0.00019 18.3 5.3 45 16-63 6-50 (275)
377 PF07995 GSDH: Glucose / Sorbo 71.9 11 0.00024 19.0 7.4 52 7-59 3-59 (331)
378 TIGR03075 PQQ_enz_alc_DH PQQ-d 70.8 15 0.00033 20.0 6.4 29 17-45 472-500 (527)
379 PF13570 PQQ_3: PQQ-like domai 69.5 4.3 9.2E-05 13.2 3.2 19 17-35 21-39 (40)
380 KOG2114|consensus 68.9 22 0.00047 21.1 5.9 55 6-61 172-227 (933)
381 PF08553 VID27: VID27 cytoplas 68.8 21 0.00045 20.9 4.1 25 2-26 615-639 (794)
382 COG3391 Uncharacterized conser 68.6 15 0.00032 19.0 7.6 55 8-64 118-175 (381)
383 PF08596 Lgl_C: Lethal giant l 67.0 17 0.00036 19.1 5.2 38 4-42 85-122 (395)
384 PF12657 TFIIIC_delta: Transcr 65.3 12 0.00026 16.9 4.5 30 7-36 87-122 (173)
385 KOG1275|consensus 64.7 26 0.00056 21.1 3.7 30 6-35 313-342 (1118)
386 PF01731 Arylesterase: Arylest 61.6 11 0.00024 15.2 4.0 26 9-34 57-83 (86)
387 KOG1916|consensus 60.4 14 0.00031 22.1 2.4 24 12-35 242-265 (1283)
388 PF13360 PQQ_2: PQQ-like domai 60.0 17 0.00037 16.8 4.1 23 17-39 212-234 (238)
389 PF08954 DUF1900: Domain of un 55.9 19 0.0004 15.9 6.4 31 7-37 12-43 (136)
390 KOG3616|consensus 52.9 49 0.0011 19.9 5.1 30 7-36 16-45 (1636)
391 cd00216 PQQ_DH Dehydrogenases 52.3 37 0.0008 18.3 6.2 29 17-45 406-434 (488)
392 KOG1520|consensus 52.0 20 0.00044 18.9 2.0 16 49-64 219-234 (376)
393 PF10636 hemP: Hemin uptake pr 51.6 12 0.00027 12.6 1.9 19 47-65 19-37 (38)
394 PF05694 SBP56: 56kDa selenium 50.5 42 0.0009 18.4 4.3 31 7-37 313-344 (461)
395 COG0512 PabA Anthranilate/para 50.1 29 0.00063 16.5 3.1 21 39-60 154-174 (191)
396 PF10214 Rrn6: RNA polymerase 48.8 53 0.0011 19.1 3.9 28 7-34 147-175 (765)
397 PF10395 Utp8: Utp8 family; I 47.6 55 0.0012 19.0 4.5 29 6-34 130-158 (670)
398 PF08801 Nucleoporin_N: Nup133 47.5 42 0.00092 17.6 4.7 30 7-36 191-220 (422)
399 TIGR02608 delta_60_rpt delta-6 46.2 19 0.00041 13.2 4.6 17 8-24 3-19 (55)
400 PRK13684 Ycf48-like protein; P 46.1 42 0.00091 17.1 7.1 56 6-62 173-228 (334)
401 PF12341 DUF3639: Protein of u 45.8 14 0.0003 11.5 3.5 24 7-32 3-26 (27)
402 COG1770 PtrB Protease II [Amin 45.2 62 0.0013 18.8 4.8 53 8-63 131-188 (682)
403 PF13449 Phytase-like: Esteras 44.8 44 0.00094 17.0 6.4 56 7-63 86-161 (326)
404 COG5169 HSF1 Heat shock transc 44.8 24 0.00053 17.8 1.7 15 50-64 26-40 (282)
405 PF02870 Methyltransf_1N: 6-O- 44.2 22 0.00048 13.5 1.6 20 14-33 9-28 (77)
406 KOG1008|consensus 43.9 24 0.00052 20.3 1.7 54 7-61 197-256 (783)
407 PF12768 Rax2: Cortical protei 43.0 46 0.001 16.8 4.0 35 26-61 15-49 (281)
408 PF14269 Arylsulfotran_2: Aryl 42.2 48 0.001 16.8 5.5 38 8-45 146-183 (299)
409 KOG2444|consensus 41.8 47 0.001 16.5 5.2 28 17-44 114-141 (238)
410 smart00415 HSF heat shock fact 41.0 31 0.00068 14.3 1.8 12 52-63 20-31 (105)
411 cd03444 Thioesterase_II_repeat 39.6 33 0.00071 14.1 2.5 13 29-42 85-97 (104)
412 KOG1983|consensus 38.4 96 0.0021 19.1 3.7 26 14-39 243-268 (993)
413 KOG4469|consensus 36.4 58 0.0013 16.0 2.8 15 23-37 205-219 (391)
414 PF00447 HSF_DNA-bind: HSF-typ 36.1 35 0.00077 13.9 1.4 11 53-63 18-28 (103)
415 PF14727 PHTB1_N: PTHB1 N-term 36.0 75 0.0016 17.2 3.2 20 17-36 37-56 (418)
416 PF14339 DUF4394: Domain of un 35.1 63 0.0014 16.0 7.2 55 6-61 27-86 (236)
417 KOG3950|consensus 34.9 66 0.0014 16.2 3.4 15 8-22 262-276 (292)
418 TIGR03074 PQQ_membr_DH membran 34.9 1E+02 0.0022 18.3 5.9 28 17-44 691-719 (764)
419 PF11635 Med16: Mediator compl 34.2 1E+02 0.0022 18.1 5.6 34 6-39 260-293 (753)
420 PRK10183 hypothetical protein; 33.9 35 0.00076 12.7 2.4 19 47-65 37-55 (56)
421 PF13983 YsaB: YsaB-like lipop 33.6 39 0.00085 13.2 2.0 12 9-20 61-72 (77)
422 PF06433 Me-amine-dh_H: Methyl 33.5 79 0.0017 16.7 5.0 38 8-45 291-330 (342)
423 KOG2109|consensus 33.3 82 0.0018 18.5 2.6 33 2-34 312-345 (788)
424 PF07250 Glyoxal_oxid_N: Glyox 33.0 69 0.0015 15.9 2.4 8 31-38 50-57 (243)
425 COG4831 Roadblock/LC7 domain [ 32.9 48 0.001 13.9 2.0 17 6-22 13-29 (109)
426 KOG2727|consensus 32.7 1E+02 0.0022 19.2 2.9 37 8-44 324-360 (1244)
427 KOG2467|consensus 32.4 83 0.0018 17.1 2.4 20 17-36 341-360 (477)
428 KOG1559|consensus 31.1 80 0.0017 16.0 2.3 20 40-60 251-270 (340)
429 PF09142 TruB_C: tRNA Pseudour 30.8 39 0.00085 12.3 1.4 11 54-64 30-40 (56)
430 KOG0155|consensus 30.3 1.1E+02 0.0024 17.4 3.0 23 14-36 111-133 (617)
431 PRK11138 outer membrane biogen 30.0 90 0.002 16.2 5.7 27 18-44 336-362 (394)
432 TIGR00189 tesB acyl-CoA thioes 29.3 80 0.0017 15.4 3.0 13 29-42 251-263 (271)
433 PRK08857 para-aminobenzoate sy 28.9 72 0.0016 14.8 2.9 15 47-61 163-177 (193)
434 COG1946 TesB Acyl-CoA thioeste 28.7 77 0.0017 16.3 1.9 13 29-42 263-275 (289)
435 PF10433 MMS1_N: Mono-function 28.3 1.1E+02 0.0024 16.7 3.6 29 8-36 46-74 (504)
436 COG1637 Predicted nuclease of 28.1 91 0.002 15.7 2.7 26 10-35 72-97 (253)
437 KOG0183|consensus 27.9 50 0.0011 16.2 1.2 11 11-21 9-19 (249)
438 KOG3885|consensus 25.6 85 0.0018 14.5 4.7 12 53-64 80-91 (155)
439 PF00843 Arena_nucleocap: Aren 25.2 35 0.00075 18.7 0.5 16 23-38 148-163 (533)
440 COG1506 DAP2 Dipeptidyl aminop 24.9 1.5E+02 0.0032 17.0 4.9 56 5-64 59-116 (620)
441 TIGR00566 trpG_papA glutamine 24.7 89 0.0019 14.5 3.1 14 47-60 159-172 (188)
442 PF13619 KTSC: KTSC domain 24.5 55 0.0012 11.9 4.1 27 6-32 4-30 (60)
443 COG2133 Glucose/sorbosone dehy 24.0 1.4E+02 0.0029 16.3 5.8 18 9-26 180-197 (399)
444 KOG1296|consensus 23.3 96 0.0021 14.3 2.6 20 10-29 107-126 (161)
445 KOG2006|consensus 23.0 1.3E+02 0.0029 18.7 2.4 30 7-36 150-179 (1023)
446 PF05578 Peptidase_S31: Pestiv 22.7 1E+02 0.0022 14.3 5.1 32 4-35 60-91 (211)
447 COG4305 Endoglucanase C-termin 22.5 1.1E+02 0.0023 14.6 4.7 20 3-22 157-176 (232)
448 PF14782 BBS2_C: Ciliary BBSom 20.7 1.7E+02 0.0036 16.2 3.5 26 7-32 16-42 (431)
449 smart00135 LY Low-density lipo 20.6 51 0.0011 10.2 1.8 10 52-61 12-21 (43)
450 PF08149 BING4CT: BING4CT (NUC 20.3 87 0.0019 12.7 3.1 28 5-32 9-36 (80)
451 PF03178 CPSF_A: CPSF A subuni 20.2 1.4E+02 0.003 15.1 3.6 29 7-35 174-202 (321)
No 1
>KOG0271|consensus
Probab=99.78 E-value=3.1e-18 Score=80.12 Aligned_cols=64 Identities=28% Similarity=0.421 Sum_probs=60.7
Q ss_pred CCccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 1 l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
+.+|.+.|.++.|+|++..+++++.|..+++||+.+.....+..+ |...|.+++|+||++.|+|
T Consensus 111 ~~GH~e~Vl~~~fsp~g~~l~tGsGD~TvR~WD~~TeTp~~t~Kg-H~~WVlcvawsPDgk~iAS 174 (480)
T KOG0271|consen 111 IAGHGEAVLSVQFSPTGSRLVTGSGDTTVRLWDLDTETPLFTCKG-HKNWVLCVAWSPDGKKIAS 174 (480)
T ss_pred cCCCCCcEEEEEecCCCceEEecCCCceEEeeccCCCCcceeecC-CccEEEEEEECCCcchhhc
Confidence 468999999999999999999999999999999999999999999 9999999999999999875
No 2
>KOG0272|consensus
Probab=99.71 E-value=7.8e-17 Score=75.90 Aligned_cols=63 Identities=24% Similarity=0.313 Sum_probs=60.5
Q ss_pred CccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 2 AAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 2 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
+||...|.++.|.++|..+++|+.|..-++||+++++.+..+.+ |...|..+.|+|+|..++|
T Consensus 300 EGHs~~v~~iaf~~DGSL~~tGGlD~~~RvWDlRtgr~im~L~g-H~k~I~~V~fsPNGy~lAT 362 (459)
T KOG0272|consen 300 EGHSKGVFSIAFQPDGSLAATGGLDSLGRVWDLRTGRCIMFLAG-HIKEILSVAFSPNGYHLAT 362 (459)
T ss_pred cccccccceeEecCCCceeeccCccchhheeecccCcEEEEecc-cccceeeEeECCCceEEee
Confidence 57999999999999999999999999999999999999999999 9999999999999999986
No 3
>KOG0263|consensus
Probab=99.69 E-value=2.1e-16 Score=78.18 Aligned_cols=63 Identities=27% Similarity=0.351 Sum_probs=60.1
Q ss_pred CccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 2 AAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 2 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
.+|.+++-++.|+|++.++++|+.|..|++|+..++..++.+.+ |..+|.+++|+|+|+++++
T Consensus 532 aghlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~~VRiF~G-H~~~V~al~~Sp~Gr~LaS 594 (707)
T KOG0263|consen 532 AGHLSDVDCVSFHPNSNYVATGSSDRTVRLWDVSTGNSVRIFTG-HKGPVTALAFSPCGRYLAS 594 (707)
T ss_pred cccccccceEEECCcccccccCCCCceEEEEEcCCCcEEEEecC-CCCceEEEEEcCCCceEee
Confidence 47889999999999999999999999999999999999999999 9999999999999999985
No 4
>KOG0266|consensus
Probab=99.64 E-value=7.3e-15 Score=70.97 Aligned_cols=64 Identities=33% Similarity=0.514 Sum_probs=60.2
Q ss_pred CCccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 1 l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
|++|...|++++|+|+++.+++++.|+.+++|++.+++....+.. |...|..++|++++.++++
T Consensus 242 l~gH~~~v~~~~f~p~g~~i~Sgs~D~tvriWd~~~~~~~~~l~~-hs~~is~~~f~~d~~~l~s 305 (456)
T KOG0266|consen 242 LKGHSTYVTSVAFSPDGNLLVSGSDDGTVRIWDVRTGECVRKLKG-HSDGISGLAFSPDGNLLVS 305 (456)
T ss_pred ecCCCCceEEEEecCCCCEEEEecCCCcEEEEeccCCeEEEeeec-cCCceEEEEECCCCCEEEE
Confidence 468999999999999999999999999999999999999999999 9999999999999998864
No 5
>KOG0272|consensus
Probab=99.64 E-value=1e-15 Score=72.27 Aligned_cols=64 Identities=28% Similarity=0.402 Sum_probs=58.8
Q ss_pred CCccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEcc-CCcEEeC
Q psy7061 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTL-DSKFLLT 65 (65)
Q Consensus 1 l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~i~s 65 (65)
|.+|...|..+.|+|+|..+++++.|+..++|+++....+.++.. |.+.|..++|+| .|++++|
T Consensus 341 L~gH~k~I~~V~fsPNGy~lATgs~Dnt~kVWDLR~r~~ly~ipA-H~nlVS~Vk~~p~~g~fL~T 405 (459)
T KOG0272|consen 341 LAGHIKEILSVAFSPNGYHLATGSSDNTCKVWDLRMRSELYTIPA-HSNLVSQVKYSPQEGYFLVT 405 (459)
T ss_pred ecccccceeeEeECCCceEEeecCCCCcEEEeeecccccceeccc-ccchhhheEecccCCeEEEE
Confidence 468999999999999999999999999999999998888889988 999999999998 6777764
No 6
>KOG0263|consensus
Probab=99.63 E-value=3.4e-15 Score=74.08 Aligned_cols=64 Identities=28% Similarity=0.520 Sum_probs=60.4
Q ss_pred CCccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 1 l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
|.+|+++|+.+.|+|+.+.++++++|..+++|.+++...+....+ |..+|+.++|+|.|.+++|
T Consensus 447 L~GH~GPVyg~sFsPd~rfLlScSED~svRLWsl~t~s~~V~y~G-H~~PVwdV~F~P~GyYFat 510 (707)
T KOG0263|consen 447 LYGHSGPVYGCSFSPDRRFLLSCSEDSSVRLWSLDTWSCLVIYKG-HLAPVWDVQFAPRGYYFAT 510 (707)
T ss_pred eecCCCceeeeeecccccceeeccCCcceeeeecccceeEEEecC-CCcceeeEEecCCceEEEe
Confidence 458999999999999999999999999999999999999989998 9999999999999999875
No 7
>KOG0271|consensus
Probab=99.62 E-value=2.4e-15 Score=70.73 Aligned_cols=63 Identities=27% Similarity=0.517 Sum_probs=59.9
Q ss_pred CccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 2 AAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 2 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
.+|+..|..+.|+|+++++++++.|..|++|+.++++.+.++.+ |-..|..++|+.|.+.++|
T Consensus 364 tgHq~lVn~V~fSPd~r~IASaSFDkSVkLW~g~tGk~lasfRG-Hv~~VYqvawsaDsRLlVS 426 (480)
T KOG0271|consen 364 TGHQALVNHVSFSPDGRYIASASFDKSVKLWDGRTGKFLASFRG-HVAAVYQVAWSADSRLLVS 426 (480)
T ss_pred hchhhheeeEEECCCccEEEEeecccceeeeeCCCcchhhhhhh-ccceeEEEEeccCccEEEE
Confidence 57999999999999999999999999999999999999999999 9999999999999998875
No 8
>KOG0286|consensus
Probab=99.60 E-value=3.2e-14 Score=65.14 Aligned_cols=64 Identities=19% Similarity=0.339 Sum_probs=58.2
Q ss_pred CCccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 1 l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
|++|.++|.++.|+++++.+++++.|+.+.+|+.-+.....-+.- ....|..++|+|.++++++
T Consensus 51 LkGH~~Ki~~~~ws~Dsr~ivSaSqDGklIvWDs~TtnK~haipl-~s~WVMtCA~sPSg~~VAc 114 (343)
T KOG0286|consen 51 LKGHLNKIYAMDWSTDSRRIVSASQDGKLIVWDSFTTNKVHAIPL-PSSWVMTCAYSPSGNFVAC 114 (343)
T ss_pred ecccccceeeeEecCCcCeEEeeccCCeEEEEEcccccceeEEec-CceeEEEEEECCCCCeEEe
Confidence 689999999999999999999999999999999988777666666 6789999999999999875
No 9
>KOG1539|consensus
Probab=99.59 E-value=2.1e-14 Score=72.30 Aligned_cols=63 Identities=29% Similarity=0.355 Sum_probs=57.9
Q ss_pred CCccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 1 l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
+.+|++.|+..+|+|+|+|+++++.|+.+++||+.++..+-.+.- ...+..+.|+|+|++++|
T Consensus 572 f~gh~nritd~~FS~DgrWlisasmD~tIr~wDlpt~~lID~~~v--d~~~~sls~SPngD~LAT 634 (910)
T KOG1539|consen 572 FWGHGNRITDMTFSPDGRWLISASMDSTIRTWDLPTGTLIDGLLV--DSPCTSLSFSPNGDFLAT 634 (910)
T ss_pred hhccccceeeeEeCCCCcEEEEeecCCcEEEEeccCcceeeeEec--CCcceeeEECCCCCEEEE
Confidence 357999999999999999999999999999999999999888774 788999999999999985
No 10
>KOG0286|consensus
Probab=99.58 E-value=3.1e-14 Score=65.17 Aligned_cols=63 Identities=16% Similarity=0.267 Sum_probs=59.2
Q ss_pred CccccceEEEEECC-CCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 2 AAHRAYGLHCVFSP-DCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 2 ~~~~~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
.+|.++|.++++.| +++.+++++.|...++||++.+....++.+ |...|+.++|.|+|.-++|
T Consensus 183 ~GH~gDV~slsl~p~~~ntFvSg~cD~~aklWD~R~~~c~qtF~g-hesDINsv~ffP~G~afat 246 (343)
T KOG0286|consen 183 HGHTGDVMSLSLSPSDGNTFVSGGCDKSAKLWDVRSGQCVQTFEG-HESDINSVRFFPSGDAFAT 246 (343)
T ss_pred cCCcccEEEEecCCCCCCeEEecccccceeeeeccCcceeEeecc-cccccceEEEccCCCeeee
Confidence 57999999999999 889999999999999999999999999999 9999999999999987764
No 11
>KOG0284|consensus
Probab=99.57 E-value=6.8e-15 Score=69.48 Aligned_cols=64 Identities=22% Similarity=0.319 Sum_probs=60.0
Q ss_pred CCccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 1 l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
|.+|..+|.+++|+|....+++++.|..|++||.+++.++.++.. |+..|..+.|+|++.+++|
T Consensus 218 L~GHgwdVksvdWHP~kgLiasgskDnlVKlWDprSg~cl~tlh~-HKntVl~~~f~~n~N~Llt 281 (464)
T KOG0284|consen 218 LRGHGWDVKSVDWHPTKGLIASGSKDNLVKLWDPRSGSCLATLHG-HKNTVLAVKFNPNGNWLLT 281 (464)
T ss_pred eccCCCCcceeccCCccceeEEccCCceeEeecCCCcchhhhhhh-ccceEEEEEEcCCCCeeEE
Confidence 468889999999999888899999999999999999999999999 9999999999999998875
No 12
>KOG0279|consensus
Probab=99.57 E-value=7.4e-14 Score=63.56 Aligned_cols=64 Identities=22% Similarity=0.350 Sum_probs=59.5
Q ss_pred CCccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 1 l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
++||.-.|..+..++++++.++++.|+.+++||+..++....+.+ |...|.+++++++.++|+|
T Consensus 59 ~~GHsH~v~dv~~s~dg~~alS~swD~~lrlWDl~~g~~t~~f~G-H~~dVlsva~s~dn~qivS 122 (315)
T KOG0279|consen 59 LTGHSHFVSDVVLSSDGNFALSASWDGTLRLWDLATGESTRRFVG-HTKDVLSVAFSTDNRQIVS 122 (315)
T ss_pred eeccceEecceEEccCCceEEeccccceEEEEEecCCcEEEEEEe-cCCceEEEEecCCCceeec
Confidence 467888899999999999999999999999999999999999999 9999999999999998875
No 13
>PTZ00421 coronin; Provisional
Probab=99.54 E-value=2.7e-13 Score=66.23 Aligned_cols=64 Identities=22% Similarity=0.343 Sum_probs=56.6
Q ss_pred CCccccceEEEEECCCC-CEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 1 MAAHRAYGLHCVFSPDC-RLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 1 l~~~~~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
|.+|...|..+.|+|++ +.+++++.|+.+++|++..+..+..+.. |...|.+++|+|++..+++
T Consensus 121 L~gH~~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~tg~~~~~l~~-h~~~V~sla~spdG~lLat 185 (493)
T PTZ00421 121 LQGHTKKVGIVSFHPSAMNVLASAGADMVVNVWDVERGKAVEVIKC-HSDQITSLEWNLDGSLLCT 185 (493)
T ss_pred ecCCCCcEEEEEeCcCCCCEEEEEeCCCEEEEEECCCCeEEEEEcC-CCCceEEEEEECCCCEEEE
Confidence 35688899999999975 6899999999999999998888888877 8899999999999998864
No 14
>KOG0318|consensus
Probab=99.54 E-value=2.2e-13 Score=66.21 Aligned_cols=64 Identities=25% Similarity=0.319 Sum_probs=58.3
Q ss_pred CccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeec--cCCCcEeEEEEccCCcEEeC
Q psy7061 2 AAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGT--ANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 2 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~i~s 65 (65)
..|...|.++.|+|+|..+++.+.|+.+.+|+-.+++.+..+.. .|.+.+..++|+||++.++|
T Consensus 187 r~HskFV~~VRysPDG~~Fat~gsDgki~iyDGktge~vg~l~~~~aHkGsIfalsWsPDs~~~~T 252 (603)
T KOG0318|consen 187 REHSKFVNCVRYSPDGSRFATAGSDGKIYIYDGKTGEKVGELEDSDAHKGSIFALSWSPDSTQFLT 252 (603)
T ss_pred cccccceeeEEECCCCCeEEEecCCccEEEEcCCCccEEEEecCCCCccccEEEEEECCCCceEEE
Confidence 45888999999999999999999999999999999998888873 48999999999999999875
No 15
>KOG0266|consensus
Probab=99.52 E-value=3.2e-13 Score=65.45 Aligned_cols=63 Identities=30% Similarity=0.469 Sum_probs=57.1
Q ss_pred CccccceEEEEECCCCCEEEEecCCCcEEEEEC-CCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 2 AAHRAYGLHCVFSPDCRLLATTSADQTARIWNT-EDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 2 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
.+|...|..+.|+|+++.+++++.|..+++|++ ..+..++.+.+ |...|.+++|+|+++.+++
T Consensus 200 ~~h~~~v~~~~fs~d~~~l~s~s~D~tiriwd~~~~~~~~~~l~g-H~~~v~~~~f~p~g~~i~S 263 (456)
T KOG0266|consen 200 SGHTRGVSDVAFSPDGSYLLSGSDDKTLRIWDLKDDGRNLKTLKG-HSTYVTSVAFSPDGNLLVS 263 (456)
T ss_pred cccccceeeeEECCCCcEEEEecCCceEEEeeccCCCeEEEEecC-CCCceEEEEecCCCCEEEE
Confidence 468889999999999999999999999999999 55688888988 9999999999999977764
No 16
>KOG1407|consensus
Probab=99.52 E-value=7.6e-14 Score=63.21 Aligned_cols=64 Identities=27% Similarity=0.424 Sum_probs=59.3
Q ss_pred CCccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 1 l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
|+.|.....++.|+|+|+++++|+.|..+.+||++...+.+.+.. +..+|..+.|+-+|++|++
T Consensus 185 i~AH~snCicI~f~p~GryfA~GsADAlvSLWD~~ELiC~R~isR-ldwpVRTlSFS~dg~~lAS 248 (313)
T KOG1407|consen 185 IKAHPSNCICIEFDPDGRYFATGSADALVSLWDVDELICERCISR-LDWPVRTLSFSHDGRMLAS 248 (313)
T ss_pred cccCCcceEEEEECCCCceEeeccccceeeccChhHhhhheeecc-ccCceEEEEeccCcceeec
Confidence 467888899999999999999999999999999998888888888 8999999999999999985
No 17
>KOG0291|consensus
Probab=99.52 E-value=3.1e-13 Score=67.93 Aligned_cols=63 Identities=25% Similarity=0.342 Sum_probs=59.1
Q ss_pred CccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 2 AAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 2 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
++|...+.+++++|||+.+++|+.|+.|++|+..++-++.++.. |...|..++|+..++.++|
T Consensus 347 QgH~~~i~~l~YSpDgq~iaTG~eDgKVKvWn~~SgfC~vTFte-Hts~Vt~v~f~~~g~~lls 409 (893)
T KOG0291|consen 347 QGHSDRITSLAYSPDGQLIATGAEDGKVKVWNTQSGFCFVTFTE-HTSGVTAVQFTARGNVLLS 409 (893)
T ss_pred cccccceeeEEECCCCcEEEeccCCCcEEEEeccCceEEEEecc-CCCceEEEEEEecCCEEEE
Confidence 47888999999999999999999999999999999999999999 9999999999999988764
No 18
>KOG0315|consensus
Probab=99.52 E-value=5.3e-13 Score=60.33 Aligned_cols=64 Identities=50% Similarity=0.926 Sum_probs=55.9
Q ss_pred CCccccceEEEEECCCCCEEEEecCCCcEEEEECCCC-ceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDF-SLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 1 l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
++.|.+.+..+.++|+++++++++.|..+++|+.++- +....+.+ |...++..+||.++.+|+|
T Consensus 211 ~~ah~~~il~C~lSPd~k~lat~ssdktv~iwn~~~~~kle~~l~g-h~rWvWdc~FS~dg~YlvT 275 (311)
T KOG0315|consen 211 FQAHNGHILRCLLSPDVKYLATCSSDKTVKIWNTDDFFKLELVLTG-HQRWVWDCAFSADGEYLVT 275 (311)
T ss_pred eecccceEEEEEECCCCcEEEeecCCceEEEEecCCceeeEEEeec-CCceEEeeeeccCccEEEe
Confidence 3568899999999999999999999999999999876 44445566 8899999999999999985
No 19
>KOG0273|consensus
Probab=99.49 E-value=7.1e-13 Score=63.76 Aligned_cols=64 Identities=27% Similarity=0.427 Sum_probs=57.4
Q ss_pred CCccccceEEEEECCCCC---------EEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 1 MAAHRAYGLHCVFSPDCR---------LLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 1 l~~~~~~v~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
|.+|...|+.+.|+|.+. .+++++.++.|++|++..+.++..+.. |..+|.+++|+|+++++++
T Consensus 397 l~~Hskei~t~~wsp~g~v~~n~~~~~~l~sas~dstV~lwdv~~gv~i~~f~k-H~~pVysvafS~~g~ylAs 469 (524)
T KOG0273|consen 397 LQAHSKEIYTIKWSPTGPVTSNPNMNLMLASASFDSTVKLWDVESGVPIHTLMK-HQEPVYSVAFSPNGRYLAS 469 (524)
T ss_pred hhhhccceeeEeecCCCCccCCCcCCceEEEeecCCeEEEEEccCCceeEeecc-CCCceEEEEecCCCcEEEe
Confidence 456888899999998654 488999999999999999999999988 9999999999999999985
No 20
>KOG1034|consensus
Probab=99.48 E-value=4.8e-13 Score=62.19 Aligned_cols=65 Identities=25% Similarity=0.388 Sum_probs=58.0
Q ss_pred CCccccceEEEEECCCC-CEEEEecCCCcEEEEECCCCceEEEeec--cCCCcEeEEEEccCCcEEeC
Q psy7061 1 MAAHRAYGLHCVFSPDC-RLLATTSADQTARIWNTEDFSLVRELGT--ANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 1 l~~~~~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~i~s 65 (65)
+.+|...|..+.++|.. +++++++.|..+++|++++..++..+.+ .|+..|.++.|++++.+|+|
T Consensus 131 ~~ghG~sINeik~~p~~~qlvls~SkD~svRlwnI~~~~Cv~VfGG~egHrdeVLSvD~~~~gd~i~S 198 (385)
T KOG1034|consen 131 YRGHGGSINEIKFHPDRPQLVLSASKDHSVRLWNIQTDVCVAVFGGVEGHRDEVLSVDFSLDGDRIAS 198 (385)
T ss_pred eeccCccchhhhcCCCCCcEEEEecCCceEEEEeccCCeEEEEecccccccCcEEEEEEcCCCCeeec
Confidence 35788999999999964 7899999999999999999999888765 58999999999999998875
No 21
>KOG0279|consensus
Probab=99.47 E-value=1.5e-12 Score=59.43 Aligned_cols=61 Identities=23% Similarity=0.290 Sum_probs=55.1
Q ss_pred CccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 2 AAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 2 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
.+|++.+..+.++|||..+++++.++...+|+++.++.+..+. +...|.+++|+|+...+.
T Consensus 189 ~gh~~~v~t~~vSpDGslcasGgkdg~~~LwdL~~~k~lysl~--a~~~v~sl~fspnrywL~ 249 (315)
T KOG0279|consen 189 IGHSGYVNTVTVSPDGSLCASGGKDGEAMLWDLNEGKNLYSLE--AFDIVNSLCFSPNRYWLC 249 (315)
T ss_pred ccccccEEEEEECCCCCEEecCCCCceEEEEEccCCceeEecc--CCCeEeeEEecCCceeEe
Confidence 4688999999999999999999999999999999999987777 689999999999976654
No 22
>KOG0296|consensus
Probab=99.47 E-value=1.5e-12 Score=61.09 Aligned_cols=63 Identities=24% Similarity=0.323 Sum_probs=59.4
Q ss_pred CccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 2 AAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 2 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
.+|+..++++..+|+.+++++++.|..-.+|++.++.....+.+ |+..|.++.|+.++.+++|
T Consensus 61 ~~H~~svFavsl~P~~~l~aTGGgDD~AflW~~~~ge~~~eltg-HKDSVt~~~FshdgtlLAT 123 (399)
T KOG0296|consen 61 DKHTDSVFAVSLHPNNNLVATGGGDDLAFLWDISTGEFAGELTG-HKDSVTCCSFSHDGTLLAT 123 (399)
T ss_pred hhcCCceEEEEeCCCCceEEecCCCceEEEEEccCCcceeEecC-CCCceEEEEEccCceEEEe
Confidence 46999999999999889999999999999999999998889998 9999999999999999986
No 23
>KOG0645|consensus
Probab=99.46 E-value=1.9e-12 Score=59.01 Aligned_cols=62 Identities=32% Similarity=0.448 Sum_probs=55.4
Q ss_pred ccccceEEEEECCCCCEEEEecCCCcEEEEECCC--CceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 3 AHRAYGLHCVFSPDCRLLATTSADQTARIWNTED--FSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 3 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
+|+..|..++|+|.|+++++++.|..+.+|.-.. -+++..+.+ |.++|-+++|+++|.+++|
T Consensus 59 ~hkrsVRsvAwsp~g~~La~aSFD~t~~Iw~k~~~efecv~~lEG-HEnEVK~Vaws~sG~~LAT 122 (312)
T KOG0645|consen 59 GHKRSVRSVAWSPHGRYLASASFDATVVIWKKEDGEFECVATLEG-HENEVKCVAWSASGNYLAT 122 (312)
T ss_pred cchheeeeeeecCCCcEEEEeeccceEEEeecCCCceeEEeeeec-cccceeEEEEcCCCCEEEE
Confidence 5888999999999999999999999999997653 356777888 9999999999999999985
No 24
>KOG0645|consensus
Probab=99.46 E-value=1.5e-12 Score=59.30 Aligned_cols=64 Identities=19% Similarity=0.268 Sum_probs=56.1
Q ss_pred CCccccceEEEEECCCCCEEEEecCCCcEEEEECCCC---ceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDF---SLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 1 l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
|+||.+.|.+++|+++|+++++++.+..|.+|.++.. .++..++. |...|-.+.|+|....++|
T Consensus 101 lEGHEnEVK~Vaws~sG~~LATCSRDKSVWiWe~deddEfec~aVL~~-HtqDVK~V~WHPt~dlL~S 167 (312)
T KOG0645|consen 101 LEGHENEVKCVAWSASGNYLATCSRDKSVWIWEIDEDDEFECIAVLQE-HTQDVKHVIWHPTEDLLFS 167 (312)
T ss_pred eeccccceeEEEEcCCCCEEEEeeCCCeEEEEEecCCCcEEEEeeecc-ccccccEEEEcCCcceeEE
Confidence 5789999999999999999999999999999999854 44556677 9999999999998888764
No 25
>PTZ00421 coronin; Provisional
Probab=99.46 E-value=2.4e-12 Score=63.06 Aligned_cols=62 Identities=21% Similarity=0.220 Sum_probs=51.9
Q ss_pred CccccceEEEEECC-CCCEEEEecCCCcEEEEECCCC-------ceEEEeeccCCCcEeEEEEccCC-cEEe
Q psy7061 2 AAHRAYGLHCVFSP-DCRLLATTSADQTARIWNTEDF-------SLVRELGTANQRWVWDAAFTLDS-KFLL 64 (65)
Q Consensus 2 ~~~~~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~v~~~~~~~~~-~~i~ 64 (65)
.+|.+.|.++.|+| +++.+++++.|+.+++|++... ..+..+.+ |...|.+++|+|++ ..++
T Consensus 72 ~GH~~~V~~v~fsP~d~~~LaSgS~DgtIkIWdi~~~~~~~~~~~~l~~L~g-H~~~V~~l~f~P~~~~iLa 142 (493)
T PTZ00421 72 LGQEGPIIDVAFNPFDPQKLFTASEDGTIMGWGIPEEGLTQNISDPIVHLQG-HTKKVGIVSFHPSAMNVLA 142 (493)
T ss_pred eCCCCCEEEEEEcCCCCCEEEEEeCCCEEEEEecCCCccccccCcceEEecC-CCCcEEEEEeCcCCCCEEE
Confidence 57899999999999 7889999999999999998754 24556667 89999999999986 4554
No 26
>KOG0273|consensus
Probab=99.45 E-value=1.8e-12 Score=62.40 Aligned_cols=62 Identities=24% Similarity=0.353 Sum_probs=56.7
Q ss_pred CCccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 1 l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
|..|+..|++++|+|+++++++|+.++.|.+|+.+.++......+ .+.|..++|+.+|.++.
T Consensus 448 f~kH~~pVysvafS~~g~ylAsGs~dg~V~iws~~~~~l~~s~~~--~~~Ifel~Wn~~G~kl~ 509 (524)
T KOG0273|consen 448 LMKHQEPVYSVAFSPNGRYLASGSLDGCVHIWSTKTGKLVKSYQG--TGGIFELCWNAAGDKLG 509 (524)
T ss_pred eccCCCceEEEEecCCCcEEEecCCCCeeEeccccchheeEeecC--CCeEEEEEEcCCCCEEE
Confidence 357999999999999999999999999999999999999988885 67799999999998774
No 27
>KOG0283|consensus
Probab=99.44 E-value=7e-13 Score=66.42 Aligned_cols=61 Identities=21% Similarity=0.375 Sum_probs=53.4
Q ss_pred CCccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccC-CcEEe
Q psy7061 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLD-SKFLL 64 (65)
Q Consensus 1 l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~i~ 64 (65)
++||.++|..+.|+. .+.|++++.|..|++|++....++..+. |.+-|+|++|+|. .++++
T Consensus 365 f~GHt~DILDlSWSK-n~fLLSSSMDKTVRLWh~~~~~CL~~F~--HndfVTcVaFnPvDDryFi 426 (712)
T KOG0283|consen 365 FKGHTADILDLSWSK-NNFLLSSSMDKTVRLWHPGRKECLKVFS--HNDFVTCVAFNPVDDRYFI 426 (712)
T ss_pred hhccchhheeccccc-CCeeEeccccccEEeecCCCcceeeEEe--cCCeeEEEEecccCCCcEe
Confidence 468999999999986 5678999999999999999999998888 8999999999994 44544
No 28
>KOG0293|consensus
Probab=99.42 E-value=7.3e-13 Score=63.19 Aligned_cols=65 Identities=20% Similarity=0.209 Sum_probs=57.4
Q ss_pred CCccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 1 l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
|.+|...|..+.|+||.+++++++.+..+.+|+.+++.....+...+...+.+++|.|||..+++
T Consensus 265 lvgh~~~V~yi~wSPDdryLlaCg~~e~~~lwDv~tgd~~~~y~~~~~~S~~sc~W~pDg~~~V~ 329 (519)
T KOG0293|consen 265 LVGHSQPVSYIMWSPDDRYLLACGFDEVLSLWDVDTGDLRHLYPSGLGFSVSSCAWCPDGFRFVT 329 (519)
T ss_pred eecccCceEEEEECCCCCeEEecCchHheeeccCCcchhhhhcccCcCCCcceeEEccCCceeEe
Confidence 45799999999999999999999999999999999999887776535789999999999987764
No 29
>KOG0295|consensus
Probab=99.42 E-value=2.7e-12 Score=60.28 Aligned_cols=64 Identities=19% Similarity=0.480 Sum_probs=58.5
Q ss_pred CCccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 1 l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
|.+|.+.|..+.|+|.|++++++..|+.+++|++++..+...+.. |..-+.++.|+.+..+++|
T Consensus 330 L~ghdnwVr~~af~p~Gkyi~ScaDDktlrvwdl~~~~cmk~~~a-h~hfvt~lDfh~~~p~VvT 393 (406)
T KOG0295|consen 330 LVGHDNWVRGVAFSPGGKYILSCADDKTLRVWDLKNLQCMKTLEA-HEHFVTSLDFHKTAPYVVT 393 (406)
T ss_pred EecccceeeeeEEcCCCeEEEEEecCCcEEEEEeccceeeeccCC-CcceeEEEecCCCCceEEe
Confidence 457999999999999999999999999999999999999888887 8999999999988877764
No 30
>KOG0265|consensus
Probab=99.41 E-value=7.6e-12 Score=57.69 Aligned_cols=64 Identities=20% Similarity=0.268 Sum_probs=56.2
Q ss_pred CCccccceEEEEECCCCCEEEEecCCCcEEEEECC-CCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTE-DFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 1 l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
+.+|.+.|+.+.|+|++..+++++.|..+.+|+.. ..+....+.+ |+..|..+.|.+++..|+|
T Consensus 43 l~gh~geI~~~~F~P~gs~~aSgG~Dr~I~LWnv~gdceN~~~lkg-HsgAVM~l~~~~d~s~i~S 107 (338)
T KOG0265|consen 43 LPGHKGEIYTIKFHPDGSCFASGGSDRAIVLWNVYGDCENFWVLKG-HSGAVMELHGMRDGSHILS 107 (338)
T ss_pred cCCCcceEEEEEECCCCCeEeecCCcceEEEEeccccccceeeecc-ccceeEeeeeccCCCEEEE
Confidence 46799999999999999999999999999999954 5566667777 9999999999999988864
No 31
>KOG0285|consensus
Probab=99.40 E-value=5.2e-12 Score=59.60 Aligned_cols=64 Identities=23% Similarity=0.322 Sum_probs=59.4
Q ss_pred CCccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 1 l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
+++|.+.|.++++.|..+++++++.|+.+.+||+.++....++.+ |-..|..+++++...|+++
T Consensus 147 i~gHlgWVr~vavdP~n~wf~tgs~DrtikIwDlatg~LkltltG-hi~~vr~vavS~rHpYlFs 210 (460)
T KOG0285|consen 147 ISGHLGWVRSVAVDPGNEWFATGSADRTIKIWDLATGQLKLTLTG-HIETVRGVAVSKRHPYLFS 210 (460)
T ss_pred hhhccceEEEEeeCCCceeEEecCCCceeEEEEcccCeEEEeecc-hhheeeeeeecccCceEEE
Confidence 468999999999999889999999999999999999999999998 8999999999998888764
No 32
>KOG0319|consensus
Probab=99.39 E-value=5.6e-12 Score=63.24 Aligned_cols=64 Identities=30% Similarity=0.443 Sum_probs=60.4
Q ss_pred CCccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 1 l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
|.+|+..+.++.|++..+.+++++.|..+++|.+++..++.++.+ |...|..+.|-.++++++|
T Consensus 501 LsGH~RGvw~V~Fs~~dq~laT~SgD~TvKIW~is~fSClkT~eG-H~~aVlra~F~~~~~qliS 564 (775)
T KOG0319|consen 501 LSGHTRGVWCVSFSKNDQLLATCSGDKTVKIWSISTFSCLKTFEG-HTSAVLRASFIRNGKQLIS 564 (775)
T ss_pred eeCCccceEEEEeccccceeEeccCCceEEEEEeccceeeeeecC-ccceeEeeeeeeCCcEEEe
Confidence 578999999999999999999999999999999999999999999 9999999999999988875
No 33
>PTZ00420 coronin; Provisional
Probab=99.39 E-value=1.9e-11 Score=60.75 Aligned_cols=62 Identities=19% Similarity=0.266 Sum_probs=51.0
Q ss_pred CCccccceEEEEECCC-CCEEEEecCCCcEEEEECCCCc--------eEEEeeccCCCcEeEEEEccCCcEE
Q psy7061 1 MAAHRAYGLHCVFSPD-CRLLATTSADQTARIWNTEDFS--------LVRELGTANQRWVWDAAFTLDSKFL 63 (65)
Q Consensus 1 l~~~~~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~v~~~~~~~~~~~i 63 (65)
+.+|.+.|.+++|+|+ +..+++++.|+.+++|++.... .+..+.+ |...|.+++|+|++..+
T Consensus 70 L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~g-H~~~V~sVaf~P~g~~i 140 (568)
T PTZ00420 70 LKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKG-HKKKISIIDWNPMNYYI 140 (568)
T ss_pred EcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEeec-CCCcEEEEEECCCCCeE
Confidence 3578999999999996 7899999999999999997532 2234555 88999999999998765
No 34
>KOG0650|consensus
Probab=99.39 E-value=6.2e-12 Score=62.28 Aligned_cols=59 Identities=24% Similarity=0.262 Sum_probs=54.2
Q ss_pred CccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcE
Q psy7061 2 AAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKF 62 (65)
Q Consensus 2 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 62 (65)
.+|++.+.++...|.|.++++|+.+|.|++|.+.+++++..... ...|.+++|+|.+..
T Consensus 397 rGHtg~Vr~iSvdp~G~wlasGsdDGtvriWEi~TgRcvr~~~~--d~~I~~vaw~P~~~~ 455 (733)
T KOG0650|consen 397 RGHTGLVRSISVDPSGEWLASGSDDGTVRIWEIATGRCVRTVQF--DSEIRSVAWNPLSDL 455 (733)
T ss_pred eccCCeEEEEEecCCcceeeecCCCCcEEEEEeecceEEEEEee--cceeEEEEecCCCCc
Confidence 58999999999999999999999999999999999999999884 678999999998653
No 35
>KOG0973|consensus
Probab=99.38 E-value=2.1e-12 Score=66.24 Aligned_cols=64 Identities=28% Similarity=0.458 Sum_probs=60.4
Q ss_pred CCccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 1 l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
|.+|.++|..+.|+|++.++++++.|..|.+|+..+...+..+.+ |...|-.+.|.|-|++++|
T Consensus 125 l~~H~~DV~Dv~Wsp~~~~lvS~s~DnsViiwn~~tF~~~~vl~~-H~s~VKGvs~DP~Gky~AS 188 (942)
T KOG0973|consen 125 LRGHDSDVLDVNWSPDDSLLVSVSLDNSVIIWNAKTFELLKVLRG-HQSLVKGVSWDPIGKYFAS 188 (942)
T ss_pred EecCCCccceeccCCCccEEEEecccceEEEEccccceeeeeeec-ccccccceEECCccCeeee
Confidence 467999999999999999999999999999999999988989999 9999999999999999985
No 36
>KOG2394|consensus
Probab=99.38 E-value=8.8e-13 Score=64.42 Aligned_cols=59 Identities=25% Similarity=0.316 Sum_probs=51.5
Q ss_pred cceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 6 AYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 6 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
+.|....|+|||+++++.++|+.+++|+.++.+....... .-....|++|+|||++|++
T Consensus 291 g~in~f~FS~DG~~LA~VSqDGfLRvF~fdt~eLlg~mkS-YFGGLLCvcWSPDGKyIvt 349 (636)
T KOG2394|consen 291 GSINEFAFSPDGKYLATVSQDGFLRIFDFDTQELLGVMKS-YFGGLLCVCWSPDGKYIVT 349 (636)
T ss_pred ccccceeEcCCCceEEEEecCceEEEeeccHHHHHHHHHh-hccceEEEEEcCCccEEEe
Confidence 3577889999999999999999999999998877666665 5578999999999999985
No 37
>KOG0318|consensus
Probab=99.38 E-value=9.1e-12 Score=60.83 Aligned_cols=64 Identities=19% Similarity=0.210 Sum_probs=54.6
Q ss_pred CccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 2 AAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 2 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
..|.+.++.++|+|++.+++++...+.+-+|+..+.......-..|...|.+++|+|+.+.++|
T Consensus 484 ~~h~a~iT~vaySpd~~yla~~Da~rkvv~yd~~s~~~~~~~w~FHtakI~~~aWsP~n~~vAT 547 (603)
T KOG0318|consen 484 LEHRAAITDVAYSPDGAYLAAGDASRKVVLYDVASREVKTNRWAFHTAKINCVAWSPNNKLVAT 547 (603)
T ss_pred ecccCCceEEEECCCCcEEEEeccCCcEEEEEcccCceecceeeeeeeeEEEEEeCCCceEEEe
Confidence 4588999999999999999999999999999998776633332238999999999999988875
No 38
>KOG1445|consensus
Probab=99.37 E-value=4.3e-13 Score=66.98 Aligned_cols=64 Identities=22% Similarity=0.339 Sum_probs=57.8
Q ss_pred CCccccceEEEEECC-CCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 1 MAAHRAYGLHCVFSP-DCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 1 l~~~~~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
|+.|..+|+.+.|+| ....+++++.|..+++||++++.....+.+ |.+.+..++|+|+|+.++|
T Consensus 673 lt~h~eKI~slRfHPLAadvLa~asyd~Ti~lWDl~~~~~~~~l~g-HtdqIf~~AWSpdGr~~At 737 (1012)
T KOG1445|consen 673 LTIHGEKITSLRFHPLAADVLAVASYDSTIELWDLANAKLYSRLVG-HTDQIFGIAWSPDGRRIAT 737 (1012)
T ss_pred eecccceEEEEEecchhhhHhhhhhccceeeeeehhhhhhhheecc-CcCceeEEEECCCCcceee
Confidence 457889999999999 457889999999999999999988888888 9999999999999999875
No 39
>KOG0295|consensus
Probab=99.37 E-value=1.5e-11 Score=57.91 Aligned_cols=63 Identities=24% Similarity=0.434 Sum_probs=52.7
Q ss_pred CccccceEEEEECCC---------------CCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 2 AAHRAYGLHCVFSPD---------------CRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 2 ~~~~~~v~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
++|.-.+.+++|.|. ++.+++++.|+.+++|++.++.++.++.+ |.+.|..++|+|.|++|+|
T Consensus 274 R~hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg~cL~tL~g-hdnwVr~~af~p~Gkyi~S 351 (406)
T KOG0295|consen 274 REHEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTGMCLFTLVG-HDNWVRGVAFSPGGKYILS 351 (406)
T ss_pred hccccceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEeccCCeEEEEEec-ccceeeeeEEcCCCeEEEE
Confidence 345556666666542 24688889999999999999999999999 9999999999999999985
No 40
>PTZ00420 coronin; Provisional
Probab=99.36 E-value=3.2e-11 Score=60.02 Aligned_cols=62 Identities=11% Similarity=0.182 Sum_probs=51.9
Q ss_pred CccccceEEEEECCCCCE-EEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 2 AAHRAYGLHCVFSPDCRL-LATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 2 ~~~~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
.+|...|..+.|+|++.. +++++.|+.+++|++..+.....+. +...+.+++|+|+|..+++
T Consensus 122 ~gH~~~V~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~~~~~i~--~~~~V~SlswspdG~lLat 184 (568)
T PTZ00420 122 KGHKKKISIIDWNPMNYYIMCSSGFDSFVNIWDIENEKRAFQIN--MPKKLSSLKWNIKGNLLSG 184 (568)
T ss_pred ecCCCcEEEEEECCCCCeEEEEEeCCCeEEEEECCCCcEEEEEe--cCCcEEEEEECCCCCEEEE
Confidence 468889999999998765 5788899999999999887766664 4578999999999998863
No 41
>KOG0293|consensus
Probab=99.36 E-value=1.3e-11 Score=59.07 Aligned_cols=64 Identities=25% Similarity=0.255 Sum_probs=54.9
Q ss_pred CCccccceEEEEECCCCCEEEEecCCCcEEEEECCCCce---EEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSL---VRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 1 l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
|..|+..|..+.|+++|+++++++.|...-+|....... ..++.+ |..+|.-+.|+||.+++++
T Consensus 220 l~~htdEVWfl~FS~nGkyLAsaSkD~Taiiw~v~~d~~~kl~~tlvg-h~~~V~yi~wSPDdryLla 286 (519)
T KOG0293|consen 220 LQDHTDEVWFLQFSHNGKYLASASKDSTAIIWIVVYDVHFKLKKTLVG-HSQPVSYIMWSPDDRYLLA 286 (519)
T ss_pred HhhCCCcEEEEEEcCCCeeEeeccCCceEEEEEEecCcceeeeeeeec-ccCceEEEEECCCCCeEEe
Confidence 356889999999999999999999999999998764443 556667 9999999999999999874
No 42
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=99.35 E-value=3.8e-11 Score=53.91 Aligned_cols=63 Identities=35% Similarity=0.469 Sum_probs=54.7
Q ss_pred CCccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 1 l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
+++|...|.++.|+|+++.+++++.++.+++|++........... +...+..+.|+|+++.++
T Consensus 5 ~~~h~~~i~~~~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~ 67 (289)
T cd00200 5 LKGHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGELLRTLKG-HTGPVRDVAASADGTYLA 67 (289)
T ss_pred hcccCCCEEEEEEcCCCCEEEEeecCcEEEEEEeeCCCcEEEEec-CCcceeEEEECCCCCEEE
Confidence 457899999999999999999999999999999998777667776 778888999999987665
No 43
>KOG0289|consensus
Probab=99.35 E-value=8e-12 Score=59.93 Aligned_cols=58 Identities=21% Similarity=0.303 Sum_probs=54.1
Q ss_pred ceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 7 YGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 7 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
.+.+..|+|||..++++..|+.+++|++.++.....+.+ |...|..++|+.+|.++++
T Consensus 349 ~~ts~~fHpDgLifgtgt~d~~vkiwdlks~~~~a~Fpg-ht~~vk~i~FsENGY~Lat 406 (506)
T KOG0289|consen 349 EYTSAAFHPDGLIFGTGTPDGVVKIWDLKSQTNVAKFPG-HTGPVKAISFSENGYWLAT 406 (506)
T ss_pred eeEEeeEcCCceEEeccCCCceEEEEEcCCccccccCCC-CCCceeEEEeccCceEEEE
Confidence 477889999999999999999999999999998889998 9999999999999999874
No 44
>KOG0315|consensus
Probab=99.32 E-value=1.4e-11 Score=55.89 Aligned_cols=62 Identities=23% Similarity=0.263 Sum_probs=53.7
Q ss_pred CccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 2 AAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 2 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
.+|+..|..+.|.-+|++..++++|+.+++|+++...+.+.+. +...|+++..+|++.-+++
T Consensus 80 e~h~kNVtaVgF~~dgrWMyTgseDgt~kIWdlR~~~~qR~~~--~~spVn~vvlhpnQteLis 141 (311)
T KOG0315|consen 80 EGHTKNVTAVGFQCDGRWMYTGSEDGTVKIWDLRSLSCQRNYQ--HNSPVNTVVLHPNQTELIS 141 (311)
T ss_pred eccCCceEEEEEeecCeEEEecCCCceEEEEeccCcccchhcc--CCCCcceEEecCCcceEEe
Confidence 4688899999999999999999999999999999866655555 6799999999999877663
No 45
>KOG0291|consensus
Probab=99.31 E-value=2.7e-11 Score=61.34 Aligned_cols=63 Identities=33% Similarity=0.303 Sum_probs=53.5
Q ss_pred CCccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 1 l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
|.||.++|..+.|+|.+..+++++.|..|++|++-.......... ....+..++|+|+|+.++
T Consensus 474 LsGHEgPVs~l~f~~~~~~LaS~SWDkTVRiW~if~s~~~vEtl~-i~sdvl~vsfrPdG~ela 536 (893)
T KOG0291|consen 474 LSGHEGPVSGLSFSPDGSLLASGSWDKTVRIWDIFSSSGTVETLE-IRSDVLAVSFRPDGKELA 536 (893)
T ss_pred hcCCCCcceeeEEccccCeEEeccccceEEEEEeeccCceeeeEe-eccceeEEEEcCCCCeEE
Confidence 578999999999999999999999999999999876543333333 678899999999999876
No 46
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=99.31 E-value=1e-10 Score=51.67 Aligned_cols=57 Identities=18% Similarity=0.286 Sum_probs=45.4
Q ss_pred cceEEEEECCCCCEEEEecC---CCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 6 AYGLHCVFSPDCRLLATTSA---DQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 6 ~~v~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
..+..+.|+|+|+.++.++. .+.+.+|+.++.+.+..... ..+..++|+|+|+++++
T Consensus 101 ~~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~~~~i~~~~~---~~~t~~~WsPdGr~~~t 160 (194)
T PF08662_consen 101 QPRNTISWSPDGRFLVLAGFGNLNGDLEFWDVRKKKKISTFEH---SDATDVEWSPDGRYLAT 160 (194)
T ss_pred CCceEEEECCCCCEEEEEEccCCCcEEEEEECCCCEEeecccc---CcEEEEEEcCCCCEEEE
Confidence 45678999999998887764 35699999997777766553 34789999999999975
No 47
>KOG0288|consensus
Probab=99.31 E-value=3.1e-11 Score=57.62 Aligned_cols=59 Identities=25% Similarity=0.277 Sum_probs=50.5
Q ss_pred ceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCC-cEeEEEEccCCcEEeC
Q psy7061 7 YGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQR-WVWDAAFTLDSKFLLT 65 (65)
Q Consensus 7 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~i~s 65 (65)
+...+.|+|++.++++|+.++.|++|+..+++....+...+.. .+.+++|+|.|..+++
T Consensus 389 DwtrvvfSpd~~YvaAGS~dgsv~iW~v~tgKlE~~l~~s~s~~aI~s~~W~~sG~~Lls 448 (459)
T KOG0288|consen 389 DWTRVVFSPDGSYVAAGSADGSVYIWSVFTGKLEKVLSLSTSNAAITSLSWNPSGSGLLS 448 (459)
T ss_pred ccceeEECCCCceeeeccCCCcEEEEEccCceEEEEeccCCCCcceEEEEEcCCCchhhc
Confidence 4778899999999999999999999999999887777663333 7999999999988764
No 48
>KOG1273|consensus
Probab=99.29 E-value=4.8e-11 Score=55.72 Aligned_cols=59 Identities=24% Similarity=0.318 Sum_probs=52.0
Q ss_pred CCccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCc
Q psy7061 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSK 61 (65)
Q Consensus 1 l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 61 (65)
|.+|..+|.+++|+++|+++++++.|-.+.+||+..+.+...+. ...+|+...|+|..+
T Consensus 61 lsaH~~pi~sl~WS~dgr~LltsS~D~si~lwDl~~gs~l~rir--f~spv~~~q~hp~k~ 119 (405)
T KOG1273|consen 61 LSAHVRPITSLCWSRDGRKLLTSSRDWSIKLWDLLKGSPLKRIR--FDSPVWGAQWHPRKR 119 (405)
T ss_pred hhccccceeEEEecCCCCEeeeecCCceeEEEeccCCCceeEEE--ccCccceeeeccccC
Confidence 35788899999999999999999999999999999999887777 478899999988644
No 49
>KOG0283|consensus
Probab=99.29 E-value=3.1e-11 Score=60.81 Aligned_cols=60 Identities=22% Similarity=0.397 Sum_probs=50.9
Q ss_pred ccccceEEEEECC-CCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 3 AHRAYGLHCVFSP-DCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 3 ~~~~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
.|...|+++.|+| |.+++++|+-|+.+++|++...+.. -... -...|+.++|.|+|++.+
T Consensus 407 ~HndfVTcVaFnPvDDryFiSGSLD~KvRiWsI~d~~Vv-~W~D-l~~lITAvcy~PdGk~av 467 (712)
T KOG0283|consen 407 SHNDFVTCVAFNPVDDRYFISGSLDGKVRLWSISDKKVV-DWND-LRDLITAVCYSPDGKGAV 467 (712)
T ss_pred ecCCeeEEEEecccCCCcEeecccccceEEeecCcCeeE-eehh-hhhhheeEEeccCCceEE
Confidence 3888999999999 7799999999999999999866544 4444 568999999999998865
No 50
>KOG0284|consensus
Probab=99.29 E-value=3.3e-12 Score=60.76 Aligned_cols=62 Identities=18% Similarity=0.239 Sum_probs=56.2
Q ss_pred CccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 2 AAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 2 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
.+|...|..+.|.++++++++++.|..++++|++..+.+..+.+ |+..+.++.|+|-...++
T Consensus 261 h~HKntVl~~~f~~n~N~Llt~skD~~~kv~DiR~mkEl~~~r~-Hkkdv~~~~WhP~~~~lf 322 (464)
T KOG0284|consen 261 HGHKNTVLAVKFNPNGNWLLTGSKDQSCKVFDIRTMKELFTYRG-HKKDVTSLTWHPLNESLF 322 (464)
T ss_pred hhccceEEEEEEcCCCCeeEEccCCceEEEEehhHhHHHHHhhc-chhhheeeccccccccce
Confidence 46889999999999999999999999999999998888888998 999999999999755544
No 51
>KOG0264|consensus
Probab=99.29 E-value=6.4e-11 Score=56.65 Aligned_cols=62 Identities=24% Similarity=0.393 Sum_probs=51.9
Q ss_pred CccccceEEEEECC-CCCEEEEecCCCcEEEEECCCC-ceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 2 AAHRAYGLHCVFSP-DCRLLATTSADQTARIWNTEDF-SLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 2 ~~~~~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
.+|.+.+.+++|.| ++..+++++.|+.|++||+++. ..+..+.+ |+..|.++.|+|.-..++
T Consensus 269 ~ah~~~vn~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~~~lh~~e~-H~dev~~V~WSPh~etvL 332 (422)
T KOG0264|consen 269 KAHSAEVNCVAFNPFNEFILATGSADKTVALWDLRNLNKPLHTFEG-HEDEVFQVEWSPHNETVL 332 (422)
T ss_pred cccCCceeEEEeCCCCCceEEeccCCCcEEEeechhcccCceeccC-CCcceEEEEeCCCCCcee
Confidence 46889999999999 4567899999999999999964 45667777 999999999999865543
No 52
>KOG0319|consensus
Probab=99.29 E-value=3.7e-11 Score=60.47 Aligned_cols=62 Identities=34% Similarity=0.544 Sum_probs=57.5
Q ss_pred ccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 3 AHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 3 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
.|..+|.+++++|+.+.+++++.|...++|++........+.+ |..+++++.|+|+.+.++|
T Consensus 461 aHdKdIN~Vaia~ndkLiAT~SqDktaKiW~le~~~l~~vLsG-H~RGvw~V~Fs~~dq~laT 522 (775)
T KOG0319|consen 461 AHDKDINCVAIAPNDKLIATGSQDKTAKIWDLEQLRLLGVLSG-HTRGVWCVSFSKNDQLLAT 522 (775)
T ss_pred hhcccccceEecCCCceEEecccccceeeecccCceEEEEeeC-CccceEEEEeccccceeEe
Confidence 4778999999999999999999999999999998899999999 9999999999999887764
No 53
>KOG0275|consensus
Probab=99.28 E-value=1.4e-12 Score=61.04 Aligned_cols=62 Identities=26% Similarity=0.343 Sum_probs=55.7
Q ss_pred cccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 4 HRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 4 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
+...|.++.|+.++..+++++.||.+++|.+.++.+++.+...|..+|.++.|+.++..+++
T Consensus 262 md~aVlci~FSRDsEMlAsGsqDGkIKvWri~tG~ClRrFdrAHtkGvt~l~FSrD~SqiLS 323 (508)
T KOG0275|consen 262 MDDAVLCISFSRDSEMLASGSQDGKIKVWRIETGQCLRRFDRAHTKGVTCLSFSRDNSQILS 323 (508)
T ss_pred cccceEEEeecccHHHhhccCcCCcEEEEEEecchHHHHhhhhhccCeeEEEEccCcchhhc
Confidence 34578999999999999999999999999999999999998659999999999999877654
No 54
>KOG2110|consensus
Probab=99.27 E-value=1.4e-10 Score=54.74 Aligned_cols=63 Identities=30% Similarity=0.393 Sum_probs=54.2
Q ss_pred CccccceEEEEECCCCCEEEEecCCCc-EEEEECCCCceEEEeecc-CCCcEeEEEEccCCcEEe
Q psy7061 2 AAHRAYGLHCVFSPDCRLLATTSADQT-ARIWNTEDFSLVRELGTA-NQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 2 ~~~~~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~i~ 64 (65)
..|.+.+.+++|+++|.++++++..|. ++++...++..+..+..+ ....+.+++|+|+++++.
T Consensus 170 ~aH~~~lAalafs~~G~llATASeKGTVIRVf~v~~G~kl~eFRRG~~~~~IySL~Fs~ds~~L~ 234 (391)
T KOG2110|consen 170 NAHKGPLAALAFSPDGTLLATASEKGTVIRVFSVPEGQKLYEFRRGTYPVSIYSLSFSPDSQFLA 234 (391)
T ss_pred EecCCceeEEEECCCCCEEEEeccCceEEEEEEcCCccEeeeeeCCceeeEEEEEEECCCCCeEE
Confidence 469999999999999999999998886 789999999998888752 236678999999999876
No 55
>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....
Probab=99.26 E-value=2.6e-11 Score=40.77 Aligned_cols=33 Identities=33% Similarity=0.565 Sum_probs=30.6
Q ss_pred CCccccceEEEEECCCCCEEEEecCCCcEEEEE
Q psy7061 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWN 33 (65)
Q Consensus 1 l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 33 (65)
+++|...|.+++|+|++..+++++.|+.+++|+
T Consensus 7 ~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 7 FRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD 39 (39)
T ss_dssp EESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred EcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence 357999999999999999999999999999996
No 56
>KOG0643|consensus
Probab=99.25 E-value=3.1e-10 Score=52.09 Aligned_cols=62 Identities=27% Similarity=0.362 Sum_probs=56.3
Q ss_pred CCccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 1 l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
+.+|++.|.+++...+...+++++.|...++|+..+++.+.++.. ...|..+.|++++.+++
T Consensus 48 y~GHtGavW~~Did~~s~~liTGSAD~t~kLWDv~tGk~la~~k~--~~~Vk~~~F~~~gn~~l 109 (327)
T KOG0643|consen 48 YDGHTGAVWCCDIDWDSKHLITGSADQTAKLWDVETGKQLATWKT--NSPVKRVDFSFGGNLIL 109 (327)
T ss_pred ecCCCceEEEEEecCCcceeeeccccceeEEEEcCCCcEEEEeec--CCeeEEEeeccCCcEEE
Confidence 368999999999999999999999999999999999999988884 78899999999988764
No 57
>KOG0640|consensus
Probab=99.24 E-value=3.4e-11 Score=56.20 Aligned_cols=63 Identities=25% Similarity=0.392 Sum_probs=56.9
Q ss_pred ccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeec-cCCCcEeEEEEccCCcEEeC
Q psy7061 3 AHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGT-ANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 3 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~i~s 65 (65)
.|++.|+.+.|++.++..++++.||.+++||--+++++.++.. +....|.+..|..++++|++
T Consensus 259 qht~ai~~V~Ys~t~~lYvTaSkDG~IklwDGVS~rCv~t~~~AH~gsevcSa~Ftkn~kyiLs 322 (430)
T KOG0640|consen 259 QHTGAITQVRYSSTGSLYVTASKDGAIKLWDGVSNRCVRTIGNAHGGSEVCSAVFTKNGKYILS 322 (430)
T ss_pred ccccceeEEEecCCccEEEEeccCCcEEeeccccHHHHHHHHhhcCCceeeeEEEccCCeEEee
Confidence 5888999999999999999999999999999999999988876 44688999999999999975
No 58
>KOG4283|consensus
Probab=99.24 E-value=7.9e-11 Score=54.72 Aligned_cols=64 Identities=34% Similarity=0.453 Sum_probs=49.8
Q ss_pred CCccccceEEEEECCCCCE-EEEecCCCcEEEEECCCC-ceEEEee-------------ccCCCcEeEEEEccCCcEEe
Q psy7061 1 MAAHRAYGLHCVFSPDCRL-LATTSADQTARIWNTEDF-SLVRELG-------------TANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 1 l~~~~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~-------------~~~~~~v~~~~~~~~~~~i~ 64 (65)
|.+|...|.+++|+|...+ +++++.|+.+++||++.. .+...+. ..|...|..++|+.++.+++
T Consensus 184 LsGHr~~vlaV~Wsp~~e~vLatgsaDg~irlWDiRrasgcf~~lD~hn~k~~p~~~~n~ah~gkvngla~tSd~~~l~ 262 (397)
T KOG4283|consen 184 LSGHRDGVLAVEWSPSSEWVLATGSADGAIRLWDIRRASGCFRVLDQHNTKRPPILKTNTAHYGKVNGLAWTSDARYLA 262 (397)
T ss_pred eccccCceEEEEeccCceeEEEecCCCceEEEEEeecccceeEEeecccCccCccccccccccceeeeeeecccchhhh
Confidence 5789999999999998775 688889999999999843 2222221 13678899999999988765
No 59
>KOG0278|consensus
Probab=99.24 E-value=1.6e-10 Score=52.72 Aligned_cols=61 Identities=16% Similarity=0.253 Sum_probs=54.9
Q ss_pred CccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 2 AAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 2 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
.+|.+.|..+.|+...+.+++++.++.|++||.+++..+.++.. ...|.++.++++++++.
T Consensus 140 ~ghtg~Ir~v~wc~eD~~iLSSadd~tVRLWD~rTgt~v~sL~~--~s~VtSlEvs~dG~ilT 200 (334)
T KOG0278|consen 140 SGHTGGIRTVLWCHEDKCILSSADDKTVRLWDHRTGTEVQSLEF--NSPVTSLEVSQDGRILT 200 (334)
T ss_pred cCCCCcceeEEEeccCceEEeeccCCceEEEEeccCcEEEEEec--CCCCcceeeccCCCEEE
Confidence 46889999999999889999999999999999999999988884 77899999999998874
No 60
>KOG0285|consensus
Probab=99.24 E-value=9.9e-11 Score=55.46 Aligned_cols=64 Identities=16% Similarity=0.223 Sum_probs=56.1
Q ss_pred CCccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 1 l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
|.+|.+.|..+.+.|-...+++++.|+.|++||+..++....+.. |...+.+++.+|....++|
T Consensus 273 l~GH~~~V~~V~~~~~dpqvit~S~D~tvrlWDl~agkt~~tlt~-hkksvral~lhP~e~~fAS 336 (460)
T KOG0285|consen 273 LSGHTNPVASVMCQPTDPQVITGSHDSTVRLWDLRAGKTMITLTH-HKKSVRALCLHPKENLFAS 336 (460)
T ss_pred ecCCCCcceeEEeecCCCceEEecCCceEEEeeeccCceeEeeec-ccceeeEEecCCchhhhhc
Confidence 468999999999998777899999999999999999988878877 8999999999998766543
No 61
>KOG0305|consensus
Probab=99.23 E-value=5.9e-11 Score=58.00 Aligned_cols=62 Identities=21% Similarity=0.136 Sum_probs=55.3
Q ss_pred CCccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEE
Q psy7061 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFL 63 (65)
Q Consensus 1 l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i 63 (65)
+.+|...|+.+.|+++++.+++++.|..+.+|+.........+.. |...|..++|+|-...+
T Consensus 297 ~~~H~qeVCgLkws~d~~~lASGgnDN~~~Iwd~~~~~p~~~~~~-H~aAVKA~awcP~q~~l 358 (484)
T KOG0305|consen 297 LQGHRQEVCGLKWSPDGNQLASGGNDNVVFIWDGLSPEPKFTFTE-HTAAVKALAWCPWQSGL 358 (484)
T ss_pred hhcccceeeeeEECCCCCeeccCCCccceEeccCCCccccEEEec-cceeeeEeeeCCCccCc
Confidence 357999999999999999999999999999999987777778888 99999999999965544
No 62
>KOG2394|consensus
Probab=99.23 E-value=1.3e-10 Score=57.22 Aligned_cols=53 Identities=25% Similarity=0.365 Sum_probs=48.9
Q ss_pred ccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEcc
Q psy7061 5 RAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTL 58 (65)
Q Consensus 5 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 58 (65)
-+...+++|+|||++|+++++|..|.+|.+...+.+..-++ |+..|..++|.|
T Consensus 332 FGGLLCvcWSPDGKyIvtGGEDDLVtVwSf~erRVVARGqG-HkSWVs~VaFDp 384 (636)
T KOG2394|consen 332 FGGLLCVCWSPDGKYIVTGGEDDLVTVWSFEERRVVARGQG-HKSWVSVVAFDP 384 (636)
T ss_pred ccceEEEEEcCCccEEEecCCcceEEEEEeccceEEEeccc-cccceeeEeecc
Confidence 35688999999999999999999999999999998888888 999999999986
No 63
>KOG1273|consensus
Probab=99.22 E-value=6.3e-11 Score=55.36 Aligned_cols=57 Identities=26% Similarity=0.346 Sum_probs=52.0
Q ss_pred eEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 8 GLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 8 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
..++.|++-|..++.|..+|.+-+||+.+....+.+.. |-.+|.+++|+++|+.++|
T Consensus 26 a~~~~Fs~~G~~lAvGc~nG~vvI~D~~T~~iar~lsa-H~~pi~sl~WS~dgr~Llt 82 (405)
T KOG1273|consen 26 AECCQFSRWGDYLAVGCANGRVVIYDFDTFRIARMLSA-HVRPITSLCWSRDGRKLLT 82 (405)
T ss_pred cceEEeccCcceeeeeccCCcEEEEEccccchhhhhhc-cccceeEEEecCCCCEeee
Confidence 56889999999999999999999999998887777777 9999999999999999875
No 64
>KOG0292|consensus
Probab=99.22 E-value=2e-10 Score=59.45 Aligned_cols=64 Identities=23% Similarity=0.382 Sum_probs=59.8
Q ss_pred CCccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 1 l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
|.+|...|..+.|++.-.|+++++.|..+++|+-++.+++..+.+ |..-|.|.+|+|....|+|
T Consensus 89 L~GHlDYVRt~~FHheyPWIlSASDDQTIrIWNwqsr~~iavltG-HnHYVMcAqFhptEDlIVS 152 (1202)
T KOG0292|consen 89 LLGHLDYVRTVFFHHEYPWILSASDDQTIRIWNWQSRKCIAVLTG-HNHYVMCAQFHPTEDLIVS 152 (1202)
T ss_pred hccccceeEEeeccCCCceEEEccCCCeEEEEeccCCceEEEEec-CceEEEeeccCCccceEEE
Confidence 568999999999999999999999999999999999999999999 9999999999998888764
No 65
>KOG0282|consensus
Probab=99.20 E-value=7e-12 Score=60.48 Aligned_cols=64 Identities=22% Similarity=0.302 Sum_probs=57.7
Q ss_pred CCccccceEEEEECC-CCCEEEEecCCCcEEEEECCC-CceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 1 MAAHRAYGLHCVFSP-DCRLLATTSADQTARIWNTED-FSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 1 l~~~~~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
+.+|+..|.++.|.| .+.++++++.|+.+++|+... +++++++.+ |...|..++|+++|..++|
T Consensus 210 ~~gH~kgvsai~~fp~~~hLlLS~gmD~~vklW~vy~~~~~lrtf~g-H~k~Vrd~~~s~~g~~fLS 275 (503)
T KOG0282|consen 210 LSGHTKGVSAIQWFPKKGHLLLSGGMDGLVKLWNVYDDRRCLRTFKG-HRKPVRDASFNNCGTSFLS 275 (503)
T ss_pred ccCCccccchhhhccceeeEEEecCCCceEEEEEEecCcceehhhhc-chhhhhhhhccccCCeeee
Confidence 467999999999999 678899999999999999875 888999999 9999999999999988764
No 66
>KOG0294|consensus
Probab=99.19 E-value=3.2e-10 Score=52.91 Aligned_cols=63 Identities=22% Similarity=0.289 Sum_probs=55.1
Q ss_pred CccccceEEEEECCCCC--EEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 2 AAHRAYGLHCVFSPDCR--LLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 2 ~~~~~~v~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
..|.+.|+++.|.++.. ++++++.||.+.+|+...=..+..+.. |...|+.++.+|.++..++
T Consensus 80 l~HagsitaL~F~~~~S~shLlS~sdDG~i~iw~~~~W~~~~slK~-H~~~Vt~lsiHPS~KLALs 144 (362)
T KOG0294|consen 80 LSHAGSITALKFYPPLSKSHLLSGSDDGHIIIWRVGSWELLKSLKA-HKGQVTDLSIHPSGKLALS 144 (362)
T ss_pred eccccceEEEEecCCcchhheeeecCCCcEEEEEcCCeEEeeeecc-cccccceeEecCCCceEEE
Confidence 35889999999988654 899999999999999987788888888 8888999999999988754
No 67
>KOG2111|consensus
Probab=99.19 E-value=8.1e-10 Score=51.55 Aligned_cols=63 Identities=30% Similarity=0.371 Sum_probs=55.2
Q ss_pred CccccceEEEEECCCCCEEEEecCCCc-EEEEECCCCceEEEeec-cCCCcEeEEEEccCCcEEe
Q psy7061 2 AAHRAYGLHCVFSPDCRLLATTSADQT-ARIWNTEDFSLVRELGT-ANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 2 ~~~~~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~i~ 64 (65)
+.|...|.++...-+|..+++++..|. +++|+..++..+..+.. .....+.+++|+|++.+++
T Consensus 178 ~AH~s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~~g~~l~E~RRG~d~A~iy~iaFSp~~s~La 242 (346)
T KOG2111|consen 178 NAHDSDIACVALNLQGTLVATASTKGTLIRIFDTEDGTLLQELRRGVDRADIYCIAFSPNSSWLA 242 (346)
T ss_pred EcccCceeEEEEcCCccEEEEeccCcEEEEEEEcCCCcEeeeeecCCchheEEEEEeCCCccEEE
Confidence 569999999999999999999998875 88999999998888765 3457899999999999886
No 68
>KOG0641|consensus
Probab=99.19 E-value=6.1e-10 Score=50.41 Aligned_cols=59 Identities=19% Similarity=0.298 Sum_probs=54.4
Q ss_pred cceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 6 AYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 6 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
..|..++..|.|+.++++..|....+|+++.++.+..+.. |...+.++.|+|...++++
T Consensus 232 savaav~vdpsgrll~sg~~dssc~lydirg~r~iq~f~p-hsadir~vrfsp~a~yllt 290 (350)
T KOG0641|consen 232 SAVAAVAVDPSGRLLASGHADSSCMLYDIRGGRMIQRFHP-HSADIRCVRFSPGAHYLLT 290 (350)
T ss_pred ceeEEEEECCCcceeeeccCCCceEEEEeeCCceeeeeCC-CccceeEEEeCCCceEEEE
Confidence 4688899999999999999999999999999999999998 9999999999999888764
No 69
>KOG0310|consensus
Probab=99.19 E-value=4.1e-10 Score=54.61 Aligned_cols=63 Identities=24% Similarity=0.289 Sum_probs=53.7
Q ss_pred CCccccceEEEEECCC-CCEEEEecCCCcEEEEECCCC-ceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 1 MAAHRAYGLHCVFSPD-CRLLATTSADQTARIWNTEDF-SLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 1 l~~~~~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
|.+|+..|-+.+|+|. +..+++|+.|+.+++||.+.. ..+..+. |..+|-.+.+-|.|..|++
T Consensus 149 l~~htDYVR~g~~~~~~~hivvtGsYDg~vrl~DtR~~~~~v~eln--hg~pVe~vl~lpsgs~ias 213 (487)
T KOG0310|consen 149 LSGHTDYVRCGDISPANDHIVVTGSYDGKVRLWDTRSLTSRVVELN--HGCPVESVLALPSGSLIAS 213 (487)
T ss_pred ecCCcceeEeeccccCCCeEEEecCCCceEEEEEeccCCceeEEec--CCCceeeEEEcCCCCEEEE
Confidence 4679999999999994 568999999999999999976 5565665 7899999999999888875
No 70
>KOG0289|consensus
Probab=99.18 E-value=4.7e-10 Score=54.16 Aligned_cols=63 Identities=17% Similarity=0.284 Sum_probs=55.1
Q ss_pred CccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 2 AAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 2 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
.+|++.|..+.|+-+|-+++++..|+.|++||++..+...++......++..+.|.+.|++++
T Consensus 386 pght~~vk~i~FsENGY~Lat~add~~V~lwDLRKl~n~kt~~l~~~~~v~s~~fD~SGt~L~ 448 (506)
T KOG0289|consen 386 PGHTGPVKAISFSENGYWLATAADDGSVKLWDLRKLKNFKTIQLDEKKEVNSLSFDQSGTYLG 448 (506)
T ss_pred CCCCCceeEEEeccCceEEEEEecCCeEEEEEehhhcccceeeccccccceeEEEcCCCCeEE
Confidence 479999999999999999999999999999999987777777653456899999999999875
No 71
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=99.18 E-value=1.5e-09 Score=48.78 Aligned_cols=62 Identities=32% Similarity=0.373 Sum_probs=53.2
Q ss_pred ccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 3 AHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 3 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
.|...+..+.|++++..+++++.++.+++|++..+.....+.. +...+.+++|+|++..+++
T Consensus 217 ~~~~~i~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~ 278 (289)
T cd00200 217 GHENGVNSVAFSPDGYLLASGSEDGTIRVWDLRTGECVQTLSG-HTNSVTSLAWSPDGKRLAS 278 (289)
T ss_pred hcCCceEEEEEcCCCcEEEEEcCCCcEEEEEcCCceeEEEccc-cCCcEEEEEECCCCCEEEE
Confidence 4667899999999988888888899999999998888777776 8889999999999877763
No 72
>KOG0973|consensus
Probab=99.17 E-value=4.2e-10 Score=58.29 Aligned_cols=63 Identities=27% Similarity=0.358 Sum_probs=53.2
Q ss_pred CccccceEEEEECCCCCEEEEecCCCcEEEEECCC-------C-----------ceEEEeeccCCCcEeEEEEccCCcEE
Q psy7061 2 AAHRAYGLHCVFSPDCRLLATTSADQTARIWNTED-------F-----------SLVRELGTANQRWVWDAAFTLDSKFL 63 (65)
Q Consensus 2 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~-----------~~~~~~~~~~~~~v~~~~~~~~~~~i 63 (65)
..|.+.|.++.|+++|+++++|+.|+.+.+|.... + +.+..+.+ |...|..++|+|++.++
T Consensus 66 ~~h~~sv~CVR~S~dG~~lAsGSDD~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~-H~~DV~Dv~Wsp~~~~l 144 (942)
T KOG0973|consen 66 DDHDGSVNCVRFSPDGSYLASGSDDRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRG-HDSDVLDVNWSPDDSLL 144 (942)
T ss_pred ccccCceeEEEECCCCCeEeeccCcceEEEeeecccCCcccccccccccccceeeEEEEEec-CCCccceeccCCCccEE
Confidence 35889999999999999999999999999998762 0 13445666 89999999999999988
Q ss_pred eC
Q psy7061 64 LT 65 (65)
Q Consensus 64 ~s 65 (65)
++
T Consensus 145 vS 146 (942)
T KOG0973|consen 145 VS 146 (942)
T ss_pred EE
Confidence 75
No 73
>KOG0316|consensus
Probab=99.16 E-value=3e-10 Score=51.47 Aligned_cols=63 Identities=17% Similarity=0.274 Sum_probs=57.2
Q ss_pred CccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 2 AAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 2 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
.+|...|..+..+.+..++++++.|..+.+|+..+++..+.+.+ |...|+.++|+.+...+++
T Consensus 56 sghG~EVlD~~~s~Dnskf~s~GgDk~v~vwDV~TGkv~Rr~rg-H~aqVNtV~fNeesSVv~S 118 (307)
T KOG0316|consen 56 SGHGHEVLDAALSSDNSKFASCGGDKAVQVWDVNTGKVDRRFRG-HLAQVNTVRFNEESSVVAS 118 (307)
T ss_pred cCCCceeeeccccccccccccCCCCceEEEEEcccCeeeeeccc-ccceeeEEEecCcceEEEe
Confidence 46778899998888888999999999999999999999999999 9999999999998877764
No 74
>KOG0296|consensus
Probab=99.16 E-value=5.3e-10 Score=52.90 Aligned_cols=61 Identities=18% Similarity=0.193 Sum_probs=55.9
Q ss_pred ccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 3 AHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 3 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
.|...|..+.|-+ ...++++..++.|+.|+.+++.....+.+ |...|.+++++|+.+.++|
T Consensus 325 ~he~~V~~l~w~~-t~~l~t~c~~g~v~~wDaRtG~l~~~y~G-H~~~Il~f~ls~~~~~vvT 385 (399)
T KOG0296|consen 325 EHEDGVTKLKWLN-TDYLLTACANGKVRQWDARTGQLKFTYTG-HQMGILDFALSPQKRLVVT 385 (399)
T ss_pred cCCCceEEEEEcC-cchheeeccCceEEeeeccccceEEEEec-CchheeEEEEcCCCcEEEE
Confidence 3677899999988 77888899999999999999999999999 9999999999999999875
No 75
>KOG0643|consensus
Probab=99.16 E-value=1.1e-09 Score=50.39 Aligned_cols=64 Identities=20% Similarity=0.309 Sum_probs=59.0
Q ss_pred CCccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 1 l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
|++|..+++.+.|..+|.++.+++.|....+|-..+++.+.++.+ |.+.|+++..+-+.+.++|
T Consensus 6 l~GHERplTqiKyN~eGDLlFscaKD~~~~vw~s~nGerlGty~G-HtGavW~~Did~~s~~liT 69 (327)
T KOG0643|consen 6 LQGHERPLTQIKYNREGDLLFSCAKDSTPTVWYSLNGERLGTYDG-HTGAVWCCDIDWDSKHLIT 69 (327)
T ss_pred cccCccccceEEecCCCcEEEEecCCCCceEEEecCCceeeeecC-CCceEEEEEecCCcceeee
Confidence 578999999999999999999999999999999889999999999 9999999998888777664
No 76
>KOG0269|consensus
Probab=99.15 E-value=2.8e-10 Score=57.79 Aligned_cols=61 Identities=20% Similarity=0.229 Sum_probs=48.1
Q ss_pred CccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcE
Q psy7061 2 AAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKF 62 (65)
Q Consensus 2 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 62 (65)
..|.+.|.++.|+|++.+|++|+.|+.+++|+..+.+......-..-..+..++|-|.-.+
T Consensus 217 ~AH~GpV~c~nwhPnr~~lATGGRDK~vkiWd~t~~~~~~~~tInTiapv~rVkWRP~~~~ 277 (839)
T KOG0269|consen 217 TAHNGPVLCLNWHPNREWLATGGRDKMVKIWDMTDSRAKPKHTINTIAPVGRVKWRPARSY 277 (839)
T ss_pred hcccCceEEEeecCCCceeeecCCCccEEEEeccCCCccceeEEeecceeeeeeeccCccc
Confidence 5799999999999999999999999999999988654322222114678899999987543
No 77
>KOG0292|consensus
Probab=99.15 E-value=1.8e-10 Score=59.59 Aligned_cols=63 Identities=17% Similarity=0.256 Sum_probs=58.6
Q ss_pred CccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 2 AAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 2 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
.+|.++|..+.|+|.+..+++++.|..+++|+.+..+++.++.+ |-+-|..+.|++...+|+|
T Consensus 48 deHdGpVRgv~FH~~qplFVSGGDDykIkVWnYk~rrclftL~G-HlDYVRt~~FHheyPWIlS 110 (1202)
T KOG0292|consen 48 DEHDGPVRGVDFHPTQPLFVSGGDDYKIKVWNYKTRRCLFTLLG-HLDYVRTVFFHHEYPWILS 110 (1202)
T ss_pred hccCCccceeeecCCCCeEEecCCccEEEEEecccceehhhhcc-ccceeEEeeccCCCceEEE
Confidence 36899999999999999999999999999999999999999999 9999999999999888864
No 78
>KOG0313|consensus
Probab=99.15 E-value=3e-10 Score=53.94 Aligned_cols=59 Identities=15% Similarity=0.302 Sum_probs=51.7
Q ss_pred CCccccceEEEEECCCC-CEEEEecCCCcEEEEECCCCc-eEEEeeccCCCcEeEEEEccCC
Q psy7061 1 MAAHRAYGLHCVFSPDC-RLLATTSADQTARIWNTEDFS-LVRELGTANQRWVWDAAFTLDS 60 (65)
Q Consensus 1 l~~~~~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~ 60 (65)
|.+|++.|..+.|+|.. .++++++.|+.+++||.++.. +++.+.+ |...|.++.|+..+
T Consensus 341 ~~gH~nwVssvkwsp~~~~~~~S~S~D~t~klWDvRS~k~plydI~~-h~DKvl~vdW~~~~ 401 (423)
T KOG0313|consen 341 LIGHKNWVSSVKWSPTNEFQLVSGSYDNTVKLWDVRSTKAPLYDIAG-HNDKVLSVDWNEGG 401 (423)
T ss_pred eecchhhhhheecCCCCceEEEEEecCCeEEEEEeccCCCcceeecc-CCceEEEEeccCCc
Confidence 45799999999999955 578999999999999999877 8888888 89999999997653
No 79
>KOG0276|consensus
Probab=99.15 E-value=6.6e-11 Score=59.13 Aligned_cols=64 Identities=16% Similarity=0.182 Sum_probs=57.5
Q ss_pred CCccccceEEEEECCCC--CEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 1 MAAHRAYGLHCVFSPDC--RLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 1 l~~~~~~v~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
|++|...|.+++|.+.+ +++++++.|..+++||.++..++.++.+ |...|..+.|+|.-..|+|
T Consensus 179 l~gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk~CV~TLeG-Ht~Nvs~v~fhp~lpiiis 244 (794)
T KOG0276|consen 179 LEGHEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQTKSCVQTLEG-HTNNVSFVFFHPELPIIIS 244 (794)
T ss_pred eeccccCcceEEeccCCCcceEEecCCCceEEEeecchHHHHHHhhc-ccccceEEEecCCCcEEEE
Confidence 56899999999998854 5899999999999999999999999999 9999999999998777764
No 80
>KOG0316|consensus
Probab=99.15 E-value=7.6e-10 Score=50.22 Aligned_cols=63 Identities=21% Similarity=0.273 Sum_probs=55.5
Q ss_pred CCccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 1 l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
|..+++.|..+.|.-+|++.++++.+..+++|+...+..+.++.+ |..+|..++.+.+...++
T Consensus 13 l~~~qgaV~avryN~dGnY~ltcGsdrtvrLWNp~rg~liktYsg-hG~EVlD~~~s~Dnskf~ 75 (307)
T KOG0316|consen 13 LDCAQGAVRAVRYNVDGNYCLTCGSDRTVRLWNPLRGALIKTYSG-HGHEVLDAALSSDNSKFA 75 (307)
T ss_pred ecccccceEEEEEccCCCEEEEcCCCceEEeecccccceeeeecC-CCceeeeccccccccccc
Confidence 346788999999999999999999999999999999999999999 899999888777655544
No 81
>KOG1063|consensus
Probab=99.14 E-value=2.9e-10 Score=57.22 Aligned_cols=64 Identities=27% Similarity=0.470 Sum_probs=52.8
Q ss_pred CCccccceEEEEECCCCCEEEEecCCCcEEEEECCCCc----eEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFS----LVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 1 l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
|.+|+-.|+.+.|+|+++++++.+.|+.+.+|...... ....... |..-|+...|+|++++++|
T Consensus 568 L~~HsLTVT~l~FSpdg~~LLsvsRDRt~sl~~~~~~~~~e~~fa~~k~-HtRIIWdcsW~pde~~FaT 635 (764)
T KOG1063|consen 568 LEGHSLTVTRLAFSPDGRYLLSVSRDRTVSLYEVQEDIKDEFRFACLKA-HTRIIWDCSWSPDEKYFAT 635 (764)
T ss_pred ecccceEEEEEEECCCCcEEEEeecCceEEeeeeecccchhhhhccccc-cceEEEEcccCcccceeEE
Confidence 56799999999999999999999999999999875322 1222344 8999999999999998764
No 82
>KOG0265|consensus
Probab=99.14 E-value=6e-10 Score=51.70 Aligned_cols=54 Identities=17% Similarity=0.191 Sum_probs=49.2
Q ss_pred CCccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEE
Q psy7061 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAA 55 (65)
Q Consensus 1 l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 55 (65)
+++|.+.|..+.|.++++.+++++.|..++.||..+++.++.... |..-|+.+.
T Consensus 86 lkgHsgAVM~l~~~~d~s~i~S~gtDk~v~~wD~~tG~~~rk~k~-h~~~vNs~~ 139 (338)
T KOG0265|consen 86 LKGHSGAVMELHGMRDGSHILSCGTDKTVRGWDAETGKRIRKHKG-HTSFVNSLD 139 (338)
T ss_pred eccccceeEeeeeccCCCEEEEecCCceEEEEecccceeeehhcc-ccceeeecC
Confidence 468999999999999999999999999999999999999999888 777777665
No 83
>KOG0306|consensus
Probab=99.13 E-value=3.5e-10 Score=57.49 Aligned_cols=63 Identities=22% Similarity=0.339 Sum_probs=57.4
Q ss_pred CCccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 1 l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
|.||.-+|.+++.+|+++.+++++.|..|++|.++=|.+-.++.. |.+.|.++.|-|....++
T Consensus 546 LYGHkLPV~smDIS~DSklivTgSADKnVKiWGLdFGDCHKS~fA-HdDSvm~V~F~P~~~~FF 608 (888)
T KOG0306|consen 546 LYGHKLPVLSMDISPDSKLIVTGSADKNVKIWGLDFGDCHKSFFA-HDDSVMSVQFLPKTHLFF 608 (888)
T ss_pred ecccccceeEEeccCCcCeEEeccCCCceEEeccccchhhhhhhc-ccCceeEEEEcccceeEE
Confidence 468999999999999999999999999999999998998888888 999999999999766554
No 84
>KOG1063|consensus
Probab=99.12 E-value=5.9e-10 Score=56.17 Aligned_cols=64 Identities=28% Similarity=0.426 Sum_probs=54.1
Q ss_pred CCccccceEEEEECCCCCEEEEecCCC-----cEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 1 MAAHRAYGLHCVFSPDCRLLATTSADQ-----TARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 1 l~~~~~~v~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
|.||...|++++.+|+++.++++.... .+++|+..+=.....+.. |.-.|..++|||+++++++
T Consensus 521 LYGHGyEv~~l~~s~~gnliASaCKS~~~ehAvI~lw~t~~W~~~~~L~~-HsLTVT~l~FSpdg~~LLs 589 (764)
T KOG1063|consen 521 LYGHGYEVYALAISPTGNLIASACKSSLKEHAVIRLWNTANWLQVQELEG-HSLTVTRLAFSPDGRYLLS 589 (764)
T ss_pred hccCceeEEEEEecCCCCEEeehhhhCCccceEEEEEeccchhhhheecc-cceEEEEEEECCCCcEEEE
Confidence 458999999999999999998876533 488999887666667788 9999999999999999975
No 85
>KOG0278|consensus
Probab=99.12 E-value=8.1e-10 Score=50.53 Aligned_cols=59 Identities=8% Similarity=0.049 Sum_probs=51.7
Q ss_pred ceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 7 YGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 7 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
.|.+...+|+...++.++++..++.||..++..+.....+|..+|.++.|+|+|..+++
T Consensus 226 nV~SASL~P~k~~fVaGged~~~~kfDy~TgeEi~~~nkgh~gpVhcVrFSPdGE~yAs 284 (334)
T KOG0278|consen 226 NVESASLHPKKEFFVAGGEDFKVYKFDYNTGEEIGSYNKGHFGPVHCVRFSPDGELYAS 284 (334)
T ss_pred ccccccccCCCceEEecCcceEEEEEeccCCceeeecccCCCCceEEEEECCCCceeec
Confidence 57778889988889999999999999999999999874348999999999999987764
No 86
>KOG0302|consensus
Probab=99.12 E-value=1.2e-09 Score=52.06 Aligned_cols=61 Identities=16% Similarity=0.129 Sum_probs=52.1
Q ss_pred CccccceEEEEECCCCCEEEEecCCCcEEEEECC---CCceEEEeeccCCCcEeEEEEccCCcEE
Q psy7061 2 AAHRAYGLHCVFSPDCRLLATTSADQTARIWNTE---DFSLVRELGTANQRWVWDAAFTLDSKFL 63 (65)
Q Consensus 2 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~v~~~~~~~~~~~i 63 (65)
+.|.++|..++|+..-.++++|+.+|.+++|+++ .+..+..+.. |...|.++.|+|....+
T Consensus 299 kAh~sDVNVISWnr~~~lLasG~DdGt~~iwDLR~~~~~~pVA~fk~-Hk~pItsieW~p~e~s~ 362 (440)
T KOG0302|consen 299 KAHNSDVNVISWNRREPLLASGGDDGTLSIWDLRQFKSGQPVATFKY-HKAPITSIEWHPHEDSV 362 (440)
T ss_pred eccCCceeeEEccCCcceeeecCCCceEEEEEhhhccCCCcceeEEe-ccCCeeEEEeccccCce
Confidence 4588899999999876789999999999999998 3567788888 99999999999965443
No 87
>KOG0308|consensus
Probab=99.11 E-value=1.5e-09 Score=54.52 Aligned_cols=63 Identities=16% Similarity=0.212 Sum_probs=57.1
Q ss_pred CCccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 1 l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
|+||+..|..+..+.+|..+++++.|+.+++|++...+++.++.. |...|+.+..+|+-+.+.
T Consensus 209 LrGHTdNVr~ll~~dDGt~~ls~sSDgtIrlWdLgqQrCl~T~~v-H~e~VWaL~~~~sf~~vY 271 (735)
T KOG0308|consen 209 LRGHTDNVRVLLVNDDGTRLLSASSDGTIRLWDLGQQRCLATYIV-HKEGVWALQSSPSFTHVY 271 (735)
T ss_pred eeccccceEEEEEcCCCCeEeecCCCceEEeeeccccceeeeEEe-ccCceEEEeeCCCcceEE
Confidence 568999999999999999999999999999999999999999998 899999999988765554
No 88
>KOG0277|consensus
Probab=99.11 E-value=6e-10 Score=50.89 Aligned_cols=60 Identities=18% Similarity=0.295 Sum_probs=52.8
Q ss_pred CccccceEEEEECCC-CCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcE
Q psy7061 2 AAHRAYGLHCVFSPD-CRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKF 62 (65)
Q Consensus 2 ~~~~~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 62 (65)
++|...|.+++|.+. .+.+++++.|+.+++|+..-+..+.++.+ |+..|...+|+|....
T Consensus 101 kEH~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~~Sv~Tf~g-h~~~Iy~a~~sp~~~n 161 (311)
T KOG0277|consen 101 KEHKREVYSVDWNTVRRRIFLTSSWDGTIKLWDPNRPNSVQTFNG-HNSCIYQAAFSPHIPN 161 (311)
T ss_pred HhhhhheEEeccccccceeEEeeccCCceEeecCCCCcceEeecC-CccEEEEEecCCCCCC
Confidence 578999999999984 56678889999999999999999999999 9999999999996443
No 89
>KOG0772|consensus
Probab=99.10 E-value=1.4e-10 Score=56.95 Aligned_cols=63 Identities=25% Similarity=0.286 Sum_probs=49.0
Q ss_pred cccc--ceEEEEECCCCCEEEEecCCCcEEEEECCCC-ceEEEeec-cCCCcEeEEEEccCCcEEeC
Q psy7061 3 AHRA--YGLHCVFSPDCRLLATTSADQTARIWNTEDF-SLVRELGT-ANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 3 ~~~~--~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~v~~~~~~~~~~~i~s 65 (65)
.|.. .|+++.|+++|+.|++.+.|..+++|+++.. +++....+ .....-..++|+|+.+.|++
T Consensus 360 AH~~g~~Itsi~FS~dg~~LlSRg~D~tLKvWDLrq~kkpL~~~tgL~t~~~~tdc~FSPd~kli~T 426 (641)
T KOG0772|consen 360 AHLPGQDITSISFSYDGNYLLSRGFDDTLKVWDLRQFKKPLNVRTGLPTPFPGTDCCFSPDDKLILT 426 (641)
T ss_pred ccCCCCceeEEEeccccchhhhccCCCceeeeeccccccchhhhcCCCccCCCCccccCCCceEEEe
Confidence 4666 8999999999999999999999999999854 33333332 23455578899999998875
No 90
>KOG0322|consensus
Probab=99.09 E-value=3.2e-10 Score=51.98 Aligned_cols=57 Identities=21% Similarity=0.237 Sum_probs=51.2
Q ss_pred ceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 7 YGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 7 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
.+..+..-||++.+++++.|+++++|..++...+..+.. |+..|++++|+|+...++
T Consensus 253 Gv~gvrIRpD~KIlATAGWD~RiRVyswrtl~pLAVLky-Hsagvn~vAfspd~~lmA 309 (323)
T KOG0322|consen 253 GVSGVRIRPDGKILATAGWDHRIRVYSWRTLNPLAVLKY-HSAGVNAVAFSPDCELMA 309 (323)
T ss_pred CccceEEccCCcEEeecccCCcEEEEEeccCCchhhhhh-hhcceeEEEeCCCCchhh
Confidence 466788899999999999999999999999999999999 999999999999965544
No 91
>KOG1009|consensus
Probab=99.09 E-value=1.6e-10 Score=55.13 Aligned_cols=63 Identities=22% Similarity=0.423 Sum_probs=57.4
Q ss_pred CccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 2 AAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 2 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
.+|..+++.+.|+|+++.+++++.+..+++|+...+.....+.. |..-+..++|.|..+++++
T Consensus 120 r~h~~diydL~Ws~d~~~l~s~s~dns~~l~Dv~~G~l~~~~~d-h~~yvqgvawDpl~qyv~s 182 (434)
T KOG1009|consen 120 RGHRDDIYDLAWSPDSNFLVSGSVDNSVRLWDVHAGQLLAILDD-HEHYVQGVAWDPLNQYVAS 182 (434)
T ss_pred cccccchhhhhccCCCceeeeeeccceEEEEEeccceeEeeccc-cccccceeecchhhhhhhh
Confidence 46888999999999999999999999999999999999888888 9999999999998877653
No 92
>KOG1274|consensus
Probab=99.08 E-value=1.2e-09 Score=56.38 Aligned_cols=63 Identities=25% Similarity=0.336 Sum_probs=51.5
Q ss_pred CCccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeecc-------CCCcEeEEEEccCCcEE
Q psy7061 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTA-------NQRWVWDAAFTLDSKFL 63 (65)
Q Consensus 1 l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~v~~~~~~~~~~~i 63 (65)
+++|.+.|.+++|+|+++.+++...+|.|++|+++++....++.+- ....+..++|+|++-.+
T Consensus 134 lrgh~apVl~l~~~p~~~fLAvss~dG~v~iw~~~~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~l 203 (933)
T KOG1274|consen 134 LRGHDAPVLQLSYDPKGNFLAVSSCDGKVQIWDLQDGILSKTLTGVDKDNEFILSRICTRLAWHPKGGTL 203 (933)
T ss_pred ecccCCceeeeeEcCCCCEEEEEecCceEEEEEcccchhhhhcccCCccccccccceeeeeeecCCCCeE
Confidence 4689999999999999999999999999999999988776655430 14566789999995444
No 93
>KOG1446|consensus
Probab=99.08 E-value=2.4e-09 Score=49.76 Aligned_cols=61 Identities=20% Similarity=0.164 Sum_probs=48.3
Q ss_pred CCccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 1 l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
+.||...|..++.+|.+..+++++.|..+++||++..++...+.. ......+|.|+|-.++
T Consensus 96 F~GH~~~V~sL~~sP~~d~FlS~S~D~tvrLWDlR~~~cqg~l~~---~~~pi~AfDp~GLifA 156 (311)
T KOG1446|consen 96 FPGHKKRVNSLSVSPKDDTFLSSSLDKTVRLWDLRVKKCQGLLNL---SGRPIAAFDPEGLIFA 156 (311)
T ss_pred cCCCCceEEEEEecCCCCeEEecccCCeEEeeEecCCCCceEEec---CCCcceeECCCCcEEE
Confidence 368999999999999889999999999999999998777666654 2234456677776554
No 94
>KOG0306|consensus
Probab=99.07 E-value=9.8e-10 Score=55.98 Aligned_cols=62 Identities=24% Similarity=0.471 Sum_probs=57.7
Q ss_pred ccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 3 AHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 3 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
+|...|.++.|.|+...+.+++.|+.++.||...-+.+..+.+ |...|++++.+|+|.+++|
T Consensus 590 AHdDSvm~V~F~P~~~~FFt~gKD~kvKqWDg~kFe~iq~L~~-H~~ev~cLav~~~G~~vvs 651 (888)
T KOG0306|consen 590 AHDDSVMSVQFLPKTHLFFTCGKDGKVKQWDGEKFEEIQKLDG-HHSEVWCLAVSPNGSFVVS 651 (888)
T ss_pred cccCceeEEEEcccceeEEEecCcceEEeechhhhhhheeecc-chheeeeeEEcCCCCeEEe
Confidence 5888999999999989999999999999999999999999999 8999999999999988875
No 95
>KOG1446|consensus
Probab=99.07 E-value=2.4e-09 Score=49.73 Aligned_cols=57 Identities=26% Similarity=0.357 Sum_probs=49.8
Q ss_pred EEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 9 LHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
....|.|+++.+++++.|+.+.+|++.++..+..+.+.+...+.++.|+|.....+|
T Consensus 236 ~~a~ftPds~Fvl~gs~dg~i~vw~~~tg~~v~~~~~~~~~~~~~~~fnP~~~mf~s 292 (311)
T KOG1446|consen 236 LSATFTPDSKFVLSGSDDGTIHVWNLETGKKVAVLRGPNGGPVSCVRFNPRYAMFVS 292 (311)
T ss_pred eeEEECCCCcEEEEecCCCcEEEEEcCCCcEeeEecCCCCCCccccccCCceeeeee
Confidence 567899999999999999999999999999988888745788899999998766553
No 96
>KOG2096|consensus
Probab=99.07 E-value=1.4e-09 Score=51.17 Aligned_cols=61 Identities=28% Similarity=0.426 Sum_probs=46.4
Q ss_pred CCccccceEEEEECCCCCEEEEecCCCcEEEEECCCC-----ceEEEeeccCCCcEeEEEEccCCcEE
Q psy7061 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDF-----SLVRELGTANQRWVWDAAFTLDSKFL 63 (65)
Q Consensus 1 l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~i 63 (65)
|++|...|++++|+.+|+.+++++.|+.+++|++++- +.++... ..+.-..+.|.||.+-+
T Consensus 82 LKgH~~~vt~~~FsSdGK~lat~~~Dr~Ir~w~~~DF~~~eHr~~R~nv--e~dhpT~V~FapDc~s~ 147 (420)
T KOG2096|consen 82 LKGHKKEVTDVAFSSDGKKLATISGDRSIRLWDVRDFENKEHRCIRQNV--EYDHPTRVVFAPDCKSV 147 (420)
T ss_pred hhccCCceeeeEEcCCCceeEEEeCCceEEEEecchhhhhhhhHhhccc--cCCCceEEEECCCcceE
Confidence 5789999999999999999999999999999998852 2222222 23455677788876654
No 97
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.06 E-value=8.4e-09 Score=53.26 Aligned_cols=61 Identities=20% Similarity=0.255 Sum_probs=50.2
Q ss_pred CccccceEEEEECC-CCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEc-cCCcEEe
Q psy7061 2 AAHRAYGLHCVFSP-DCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFT-LDSKFLL 64 (65)
Q Consensus 2 ~~~~~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~i~ 64 (65)
.+|...|.++.|+| ++..+++++.|+.+++|++..+..+..+.. ...+.++.|+ +++..++
T Consensus 572 ~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~~~~~~--~~~v~~v~~~~~~g~~la 634 (793)
T PLN00181 572 KEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIKT--KANICCVQFPSESGRSLA 634 (793)
T ss_pred cCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEEEEEec--CCCeEEEEEeCCCCCEEE
Confidence 46888999999997 678999999999999999998888777764 3578888885 4566665
No 98
>KOG1310|consensus
Probab=99.06 E-value=2e-09 Score=53.63 Aligned_cols=59 Identities=19% Similarity=0.354 Sum_probs=53.8
Q ss_pred CCccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccC
Q psy7061 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLD 59 (65)
Q Consensus 1 l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 59 (65)
|.||++=|.+++|..+|.++++|+.|-.+.+|+....+.+..+..+|...|.+++|-|.
T Consensus 46 L~GH~GCVN~LeWn~dG~lL~SGSDD~r~ivWd~~~~KllhsI~TgHtaNIFsvKFvP~ 104 (758)
T KOG1310|consen 46 LTGHTGCVNCLEWNADGELLASGSDDTRLIVWDPFEYKLLHSISTGHTANIFSVKFVPY 104 (758)
T ss_pred hccccceecceeecCCCCEEeecCCcceEEeecchhcceeeeeecccccceeEEeeecc
Confidence 57899999999999999999999999999999999888888887668999999999874
No 99
>KOG0303|consensus
Probab=99.06 E-value=7.2e-10 Score=53.09 Aligned_cols=63 Identities=22% Similarity=0.336 Sum_probs=56.0
Q ss_pred CCccccceEEEEECCC-CCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 1 MAAHRAYGLHCVFSPD-CRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 1 l~~~~~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
|.+|+..|-.+.|+|. .+.+++++.|..+.+|+..+++....+. |...|.++.|+-+|.+++|
T Consensus 127 L~gH~rrVg~V~wHPtA~NVLlsag~Dn~v~iWnv~tgeali~l~--hpd~i~S~sfn~dGs~l~T 190 (472)
T KOG0303|consen 127 LYGHQRRVGLVQWHPTAPNVLLSAGSDNTVSIWNVGTGEALITLD--HPDMVYSMSFNRDGSLLCT 190 (472)
T ss_pred EeecceeEEEEeecccchhhHhhccCCceEEEEeccCCceeeecC--CCCeEEEEEeccCCceeee
Confidence 5689999999999995 5788999999999999999999877766 8999999999999998875
No 100
>KOG0268|consensus
Probab=99.05 E-value=5e-10 Score=53.12 Aligned_cols=64 Identities=20% Similarity=0.305 Sum_probs=53.8
Q ss_pred CccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 2 AAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 2 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
++|.+.|..++|+|.|+-+++++.|..+++|....+..........=..|.++.|+.|.++|+|
T Consensus 269 ~dhvsAV~dVdfsptG~EfvsgsyDksIRIf~~~~~~SRdiYhtkRMq~V~~Vk~S~Dskyi~S 332 (433)
T KOG0268|consen 269 KDHVSAVMDVDFSPTGQEFVSGSYDKSIRIFPVNHGHSRDIYHTKRMQHVFCVKYSMDSKYIIS 332 (433)
T ss_pred cccceeEEEeccCCCcchhccccccceEEEeecCCCcchhhhhHhhhheeeEEEEeccccEEEe
Confidence 4688899999999999999999999999999998776655554423367999999999999975
No 101
>KOG1408|consensus
Probab=99.03 E-value=1.5e-09 Score=55.49 Aligned_cols=62 Identities=21% Similarity=0.304 Sum_probs=53.7
Q ss_pred ccccceEEEEECCCCCEEEEecC--CCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 3 AHRAYGLHCVFSPDCRLLATTSA--DQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 3 ~~~~~v~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
.+...+++++|+++|+++++|-. .-.+++|++.....+..+.. |+..+.+++|+|.++++++
T Consensus 76 ssRk~~t~vAfS~~GryvatGEcG~~pa~kVw~la~h~vVAEfvd-HKY~vtcvaFsp~~kyvvS 139 (1080)
T KOG1408|consen 76 SSRKPLTCVAFSQNGRYVATGECGRTPASKVWSLAFHGVVAEFVD-HKYNVTCVAFSPGNKYVVS 139 (1080)
T ss_pred ccCcceeEEEEcCCCcEEEecccCCCccceeeeeccccchhhhhh-ccccceeeeecCCCcEEEe
Confidence 45668999999999999998763 44689999998888888998 9999999999999999874
No 102
>KOG0299|consensus
Probab=99.03 E-value=2.7e-09 Score=51.74 Aligned_cols=57 Identities=25% Similarity=0.326 Sum_probs=51.7
Q ss_pred ccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCC
Q psy7061 3 AHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDS 60 (65)
Q Consensus 3 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 60 (65)
+|...+.++..++++++++++..+..+.+|+.++.+.+..+.+ |++.|.+++|-...
T Consensus 200 ~h~keil~~avS~Dgkylatgg~d~~v~Iw~~~t~ehv~~~~g-hr~~V~~L~fr~gt 256 (479)
T KOG0299|consen 200 GHVKEILTLAVSSDGKYLATGGRDRHVQIWDCDTLEHVKVFKG-HRGAVSSLAFRKGT 256 (479)
T ss_pred cccceeEEEEEcCCCcEEEecCCCceEEEecCcccchhhcccc-cccceeeeeeecCc
Confidence 5777899999999999999999999999999999999999998 99999999986543
No 103
>KOG0275|consensus
Probab=99.02 E-value=3.2e-10 Score=53.46 Aligned_cols=62 Identities=27% Similarity=0.311 Sum_probs=58.2
Q ss_pred ccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 3 AHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 3 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
.|+..|+++.|+.++..+++++.|..+++..+.+++.+..+.+ |..-|+...|+++|..|++
T Consensus 304 AHtkGvt~l~FSrD~SqiLS~sfD~tvRiHGlKSGK~LKEfrG-HsSyvn~a~ft~dG~~iis 365 (508)
T KOG0275|consen 304 AHTKGVTCLSFSRDNSQILSASFDQTVRIHGLKSGKCLKEFRG-HSSYVNEATFTDDGHHIIS 365 (508)
T ss_pred hhccCeeEEEEccCcchhhcccccceEEEeccccchhHHHhcC-ccccccceEEcCCCCeEEE
Confidence 5888999999999999999999999999999999999999999 9999999999999998874
No 104
>KOG2096|consensus
Probab=99.02 E-value=2.1e-09 Score=50.60 Aligned_cols=35 Identities=31% Similarity=0.477 Sum_probs=32.8
Q ss_pred CCccccceEEEEECCCCCEEEEecCCCcEEEEECC
Q psy7061 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTE 35 (65)
Q Consensus 1 l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 35 (65)
|++|+..|..++|++++..+++.+.||..++|+.+
T Consensus 274 LkGH~saV~~~aFsn~S~r~vtvSkDG~wriwdtd 308 (420)
T KOG2096|consen 274 LKGHQSAVLAAAFSNSSTRAVTVSKDGKWRIWDTD 308 (420)
T ss_pred eccchhheeeeeeCCCcceeEEEecCCcEEEeecc
Confidence 67999999999999999999999999999999876
No 105
>KOG0303|consensus
Probab=99.01 E-value=1.4e-09 Score=52.13 Aligned_cols=61 Identities=23% Similarity=0.247 Sum_probs=50.8
Q ss_pred CccccceEEEEECC-CCCEEEEecCCCcEEEEECCCC-------ceEEEeeccCCCcEeEEEEccCCcEE
Q psy7061 2 AAHRAYGLHCVFSP-DCRLLATTSADQTARIWNTEDF-------SLVRELGTANQRWVWDAAFTLDSKFL 63 (65)
Q Consensus 2 ~~~~~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~v~~~~~~~~~~~i 63 (65)
.+|++.+..++|+| +.+.+++|++|..+.+|.+... ..+..+.+ |...|-.++|+|....+
T Consensus 78 ~GHt~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~g-H~rrVg~V~wHPtA~NV 146 (472)
T KOG0303|consen 78 CGHTAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLTRDLTEPVVELYG-HQRRVGLVQWHPTAPNV 146 (472)
T ss_pred cCccccccccccCccCCceeecCCCCceEEEEECCCcccccCcccceEEEee-cceeEEEEeecccchhh
Confidence 47999999999999 5688999999999999998743 34556667 99999999999975543
No 106
>KOG0300|consensus
Probab=99.01 E-value=3.1e-09 Score=50.17 Aligned_cols=64 Identities=27% Similarity=0.289 Sum_probs=56.4
Q ss_pred CCccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 1 l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
+.+|...|..+......+.+.+++.|+.-++|.+.++.++.++.+ |.+.|++++|++.+..+++
T Consensus 144 ~~GHkDGiW~Vaa~~tqpi~gtASADhTA~iWs~Esg~CL~~Y~G-H~GSVNsikfh~s~~L~lT 207 (481)
T KOG0300|consen 144 LEGHKDGIWHVAADSTQPICGTASADHTARIWSLESGACLATYTG-HTGSVNSIKFHNSGLLLLT 207 (481)
T ss_pred hcccccceeeehhhcCCcceeecccccceeEEeeccccceeeecc-cccceeeEEeccccceEEE
Confidence 357888888888776667888899999999999999999999999 9999999999999888764
No 107
>KOG1407|consensus
Probab=99.00 E-value=8.4e-09 Score=47.43 Aligned_cols=61 Identities=21% Similarity=0.329 Sum_probs=51.3
Q ss_pred CccccceEEEEECCC-CCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 2 AAHRAYGLHCVFSPD-CRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 2 ~~~~~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
.+|...+-.+.|+|. ...+++++.+..+++|+++.++++..... +.+-..+.|+|++.+++
T Consensus 61 ~gh~~svdql~w~~~~~d~~atas~dk~ir~wd~r~~k~~~~i~~--~~eni~i~wsp~g~~~~ 122 (313)
T KOG1407|consen 61 RGHTDSVDQLCWDPKHPDLFATASGDKTIRIWDIRSGKCTARIET--KGENINITWSPDGEYIA 122 (313)
T ss_pred cCCCcchhhheeCCCCCcceEEecCCceEEEEEeccCcEEEEeec--cCcceEEEEcCCCCEEE
Confidence 568888999999885 56889999999999999999999887775 55567788999998875
No 108
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.00 E-value=1.4e-08 Score=52.45 Aligned_cols=59 Identities=15% Similarity=0.349 Sum_probs=49.8
Q ss_pred cceEEEEECC-CCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEcc-CCcEEeC
Q psy7061 6 AYGLHCVFSP-DCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTL-DSKFLLT 65 (65)
Q Consensus 6 ~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~i~s 65 (65)
..+..+.|++ .+..+++++.++.+++|++.++..+..+.. |...|.+++|+| ++..++|
T Consensus 533 ~~v~~l~~~~~~~~~las~~~Dg~v~lWd~~~~~~~~~~~~-H~~~V~~l~~~p~~~~~L~S 593 (793)
T PLN00181 533 SKLSGICWNSYIKSQVASSNFEGVVQVWDVARSQLVTEMKE-HEKRVWSIDYSSADPTLLAS 593 (793)
T ss_pred CceeeEEeccCCCCEEEEEeCCCeEEEEECCCCeEEEEecC-CCCCEEEEEEcCCCCCEEEE
Confidence 4577888887 467899999999999999998888888888 899999999997 6777653
No 109
>KOG0282|consensus
Probab=99.00 E-value=3e-09 Score=51.82 Aligned_cols=54 Identities=22% Similarity=0.359 Sum_probs=49.2
Q ss_pred ceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCc
Q psy7061 7 YGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSK 61 (65)
Q Consensus 7 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 61 (65)
.-+.+.|+|||..+++|..+|.+.+|+-++.+.+..+.. |...+..+.|+|...
T Consensus 434 ys~~v~fSpDG~~l~SGdsdG~v~~wdwkt~kl~~~lka-h~~~ci~v~wHP~e~ 487 (503)
T KOG0282|consen 434 YSCQVDFSPDGRTLCSGDSDGKVNFWDWKTTKLVSKLKA-HDQPCIGVDWHPVEP 487 (503)
T ss_pred ceeeEEEcCCCCeEEeecCCccEEEeechhhhhhhcccc-CCcceEEEEecCCCc
Confidence 466789999999999999999999999999999999998 899999999999643
No 110
>KOG1007|consensus
Probab=99.00 E-value=3.5e-09 Score=49.31 Aligned_cols=61 Identities=31% Similarity=0.545 Sum_probs=49.9
Q ss_pred ccccceEEEEECCCCC-EEEEecCCCcEEEEECCCC-ceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 3 AHRAYGLHCVFSPDCR-LLATTSADQTARIWNTEDF-SLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 3 ~~~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
.|...+..++|.|+.+ .+++++.++.+++||.+.. .++..+.+ |...|+++.|+|....++
T Consensus 212 AHgq~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~tk~pv~el~~-HsHWvW~VRfn~~hdqLi 274 (370)
T KOG1007|consen 212 AHGQRVRDLDFNPNKQHILVTCGDDGYVRIWDTRKTKFPVQELPG-HSHWVWAVRFNPEHDQLI 274 (370)
T ss_pred hhcceeeeccCCCCceEEEEEcCCCccEEEEeccCCCccccccCC-CceEEEEEEecCccceEE
Confidence 3666788999999765 5789999999999999854 45666777 999999999999876654
No 111
>KOG1009|consensus
Probab=99.00 E-value=3.7e-09 Score=50.69 Aligned_cols=64 Identities=25% Similarity=0.371 Sum_probs=51.2
Q ss_pred CCccccceEEEEECCCCCEEEEecCCCcEEEEECC--------C-----C--c-eEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTE--------D-----F--S-LVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 1 l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~-----~--~-~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
|..|...|..+.|+|+|..+++++.++.+.+|... + . . ....+.+ |...+..++|+|++.+++
T Consensus 61 Ls~H~~aVN~vRf~p~gelLASg~D~g~v~lWk~~~~~~~~~d~e~~~~ke~w~v~k~lr~-h~~diydL~Ws~d~~~l~ 139 (434)
T KOG1009|consen 61 LSRHTRAVNVVRFSPDGELLASGGDGGEVFLWKQGDVRIFDADTEADLNKEKWVVKKVLRG-HRDDIYDLAWSPDSNFLV 139 (434)
T ss_pred ccCCcceeEEEEEcCCcCeeeecCCCceEEEEEecCcCCccccchhhhCccceEEEEEecc-cccchhhhhccCCCceee
Confidence 45688999999999999999999999999999765 1 1 1 1223334 889999999999998876
Q ss_pred C
Q psy7061 65 T 65 (65)
Q Consensus 65 s 65 (65)
+
T Consensus 140 s 140 (434)
T KOG1009|consen 140 S 140 (434)
T ss_pred e
Confidence 4
No 112
>KOG0640|consensus
Probab=98.99 E-value=7.4e-10 Score=51.94 Aligned_cols=61 Identities=20% Similarity=0.247 Sum_probs=50.2
Q ss_pred CccccceEEEEECCCCCEEEEecCCCcEEEEECCCC---ceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 2 AAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDF---SLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 2 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
..|...|..+.|+|....+++++.|+.+++||+... +....+. ....|.++.|+|.|.+++
T Consensus 169 YDH~devn~l~FHPre~ILiS~srD~tvKlFDfsK~saKrA~K~~q--d~~~vrsiSfHPsGefll 232 (430)
T KOG0640|consen 169 YDHVDEVNDLDFHPRETILISGSRDNTVKLFDFSKTSAKRAFKVFQ--DTEPVRSISFHPSGEFLL 232 (430)
T ss_pred hhccCcccceeecchhheEEeccCCCeEEEEecccHHHHHHHHHhh--ccceeeeEeecCCCceEE
Confidence 458889999999999999999999999999999743 2333344 467899999999999875
No 113
>KOG0264|consensus
Probab=98.99 E-value=5.2e-09 Score=50.43 Aligned_cols=64 Identities=14% Similarity=0.270 Sum_probs=49.6
Q ss_pred CCccccceEEEEECCCC-CEEEEecCCCcEEEEECCCCceE-------------EEeeccCCCcEeEEEEccCCcEEe
Q psy7061 1 MAAHRAYGLHCVFSPDC-RLLATTSADQTARIWNTEDFSLV-------------RELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 1 l~~~~~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
+.+|...|..+.|+|.. ..+++++.|+.+.+||+...... .-..++|...|..+.|+|+..+.+
T Consensus 312 ~e~H~dev~~V~WSPh~etvLASSg~D~rl~vWDls~ig~eq~~eda~dgppEllF~HgGH~~kV~DfsWnp~ePW~I 389 (422)
T KOG0264|consen 312 FEGHEDEVFQVEWSPHNETVLASSGTDRRLNVWDLSRIGEEQSPEDAEDGPPELLFIHGGHTAKVSDFSWNPNEPWTI 389 (422)
T ss_pred ccCCCcceEEEEeCCCCCceeEecccCCcEEEEeccccccccChhhhccCCcceeEEecCcccccccccCCCCCCeEE
Confidence 45789999999999964 67899999999999998732211 122335889999999999877665
No 114
>KOG0974|consensus
Probab=98.99 E-value=5.4e-09 Score=54.46 Aligned_cols=58 Identities=22% Similarity=0.366 Sum_probs=51.6
Q ss_pred CCccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEE-EeeccCCCcEeEEEEccC
Q psy7061 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVR-ELGTANQRWVWDAAFTLD 59 (65)
Q Consensus 1 l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~~~~~~~~ 59 (65)
+.+|.+.++.+.++.+|.++++.+.|..+++|.+++.+... ...+ |..+++.+++.|+
T Consensus 171 l~GHeG~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~~~~~~~fg-HsaRvw~~~~~~n 229 (967)
T KOG0974|consen 171 LKGHEGSIFSIVTSLDGRYIASVSDDRSIRLWPIDSREVLGCTGFG-HSARVWACCFLPN 229 (967)
T ss_pred ecccCCceEEEEEccCCcEEEEEecCcceeeeecccccccCccccc-ccceeEEEEeccc
Confidence 46899999999999999999999999999999999877665 3444 8999999999998
No 115
>KOG0302|consensus
Probab=98.98 E-value=4.2e-09 Score=50.32 Aligned_cols=63 Identities=17% Similarity=0.195 Sum_probs=50.5
Q ss_pred CccccceEEEEECCC-CCEEEEecCCCcEEEEECCCCc--eEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 2 AAHRAYGLHCVFSPD-CRLLATTSADQTARIWNTEDFS--LVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 2 ~~~~~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
.+|+..|..+.|+|. ...+++++.|+.+++|+++.+. ....... |...|+.+.|+....+|++
T Consensus 254 ~gH~~SVEDLqWSptE~~vfaScS~DgsIrIWDiRs~~~~~~~~~kA-h~sDVNVISWnr~~~lLas 319 (440)
T KOG0302|consen 254 TGHTKSVEDLQWSPTEDGVFASCSCDGSIRIWDIRSGPKKAAVSTKA-HNSDVNVISWNRREPLLAS 319 (440)
T ss_pred cccccchhhhccCCccCceEEeeecCceEEEEEecCCCccceeEeec-cCCceeeEEccCCcceeee
Confidence 468889999999995 4688999999999999999762 2223344 8889999999988776653
No 116
>KOG0281|consensus
Probab=98.97 E-value=2.2e-09 Score=51.12 Aligned_cols=56 Identities=20% Similarity=0.296 Sum_probs=49.2
Q ss_pred CCccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccC
Q psy7061 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLD 59 (65)
Q Consensus 1 l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 59 (65)
|.||++.|.++.|+ .+.+++|+.|..+++|+..+++++.++.. |...|..+.|+..
T Consensus 233 L~GHtGSVLCLqyd--~rviisGSSDsTvrvWDv~tge~l~tlih-HceaVLhlrf~ng 288 (499)
T KOG0281|consen 233 LTGHTGSVLCLQYD--ERVIVSGSSDSTVRVWDVNTGEPLNTLIH-HCEAVLHLRFSNG 288 (499)
T ss_pred hhcCCCcEEeeecc--ceEEEecCCCceEEEEeccCCchhhHHhh-hcceeEEEEEeCC
Confidence 56899999999995 46899999999999999999999998888 8888888887654
No 117
>KOG1538|consensus
Probab=98.97 E-value=1.6e-09 Score=55.18 Aligned_cols=60 Identities=18% Similarity=0.237 Sum_probs=45.6
Q ss_pred CCccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEE
Q psy7061 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFL 63 (65)
Q Consensus 1 l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i 63 (65)
|++|...|.+++|+.+|+.+++|+.|..|.+|..+-.. .+...|.+.+.++.|+|....+
T Consensus 49 LKgHKDtVycVAys~dGkrFASG~aDK~VI~W~~klEG---~LkYSH~D~IQCMsFNP~~h~L 108 (1081)
T KOG1538|consen 49 LKGHKDTVYCVAYAKDGKRFASGSADKSVIIWTSKLEG---ILKYSHNDAIQCMSFNPITHQL 108 (1081)
T ss_pred cccccceEEEEEEccCCceeccCCCceeEEEecccccc---eeeeccCCeeeEeecCchHHHh
Confidence 57899999999999999999999999999999865222 2222266667777777655444
No 118
>KOG0269|consensus
Probab=98.97 E-value=2e-09 Score=54.89 Aligned_cols=61 Identities=15% Similarity=0.163 Sum_probs=51.5
Q ss_pred cccceEEEEECC-CCCEEEEecCCCcEEEEECCC-CceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 4 HRAYGLHCVFSP-DCRLLATTSADQTARIWNTED-FSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 4 ~~~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
....|..+.|+| .+..++++...|.+++||++- .+...++.. |.+.|.++-|+|++.+|+|
T Consensus 175 nSESiRDV~fsp~~~~~F~s~~dsG~lqlWDlRqp~r~~~k~~A-H~GpV~c~nwhPnr~~lAT 237 (839)
T KOG0269|consen 175 NSESIRDVKFSPGYGNKFASIHDSGYLQLWDLRQPDRCEKKLTA-HNGPVLCLNWHPNREWLAT 237 (839)
T ss_pred cchhhhceeeccCCCceEEEecCCceEEEeeccCchhHHHHhhc-ccCceEEEeecCCCceeee
Confidence 345688899999 467899999999999999984 455666677 9999999999999999986
No 119
>KOG0267|consensus
Probab=98.96 E-value=2.5e-09 Score=54.33 Aligned_cols=64 Identities=17% Similarity=0.261 Sum_probs=58.3
Q ss_pred CCccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 1 l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
|.+|...+..+.|+|-+.+.++++.+...++||.+...+...+.+ |...+..++|+|+|+++++
T Consensus 108 Ltgh~~~~~sv~f~P~~~~~a~gStdtd~~iwD~Rk~Gc~~~~~s-~~~vv~~l~lsP~Gr~v~~ 171 (825)
T KOG0267|consen 108 LTGHLLNITSVDFHPYGEFFASGSTDTDLKIWDIRKKGCSHTYKS-HTRVVDVLRLSPDGRWVAS 171 (825)
T ss_pred hhccccCcceeeeccceEEeccccccccceehhhhccCceeeecC-CcceeEEEeecCCCceeec
Confidence 457888999999999999999999999999999998888888988 8999999999999998763
No 120
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=98.95 E-value=2.8e-08 Score=44.04 Aligned_cols=57 Identities=14% Similarity=0.189 Sum_probs=42.8
Q ss_pred ccceEEEEECCCCCEEEE--ecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 5 RAYGLHCVFSPDCRLLAT--TSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 5 ~~~v~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
.+.|..+.|+|+++.++. +.....+.+|+++ .+.+..+. ...+..+.|+|+|+++++
T Consensus 59 ~~~I~~~~WsP~g~~favi~g~~~~~v~lyd~~-~~~i~~~~---~~~~n~i~wsP~G~~l~~ 117 (194)
T PF08662_consen 59 EGPIHDVAWSPNGNEFAVIYGSMPAKVTLYDVK-GKKIFSFG---TQPRNTISWSPDGRFLVL 117 (194)
T ss_pred CCceEEEEECcCCCEEEEEEccCCcccEEEcCc-ccEeEeec---CCCceEEEECCCCCEEEE
Confidence 346999999999987543 4456789999997 55555544 356678999999999873
No 121
>KOG0267|consensus
Probab=98.95 E-value=4.8e-10 Score=56.77 Aligned_cols=63 Identities=25% Similarity=0.356 Sum_probs=57.0
Q ss_pred CCccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 1 l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
|.+|...|-++.|++....++.+..++.+++||+..++.++++.+ |...+..+.|+|-+.+.+
T Consensus 66 ~~~hespIeSl~f~~~E~LlaagsasgtiK~wDleeAk~vrtLtg-h~~~~~sv~f~P~~~~~a 128 (825)
T KOG0267|consen 66 LTGHESPIESLTFDTSERLLAAGSASGTIKVWDLEEAKIVRTLTG-HLLNITSVDFHPYGEFFA 128 (825)
T ss_pred eeccCCcceeeecCcchhhhcccccCCceeeeehhhhhhhhhhhc-cccCcceeeeccceEEec
Confidence 467899999999999888999999999999999999999999998 899999999999887653
No 122
>KOG0281|consensus
Probab=98.94 E-value=2.1e-09 Score=51.13 Aligned_cols=59 Identities=22% Similarity=0.419 Sum_probs=48.8
Q ss_pred CCccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 1 l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
|.||...|..++|+ .+++++++.|..+++|++.++..++.+.+ |..++.+++| .+++++
T Consensus 316 LvGHrAaVNvVdfd--~kyIVsASgDRTikvW~~st~efvRtl~g-HkRGIAClQY--r~rlvV 374 (499)
T KOG0281|consen 316 LVGHRAAVNVVDFD--DKYIVSASGDRTIKVWSTSTCEFVRTLNG-HKRGIACLQY--RDRLVV 374 (499)
T ss_pred Hhhhhhheeeeccc--cceEEEecCCceEEEEeccceeeehhhhc-ccccceehhc--cCeEEE
Confidence 45788889999885 56899999999999999999999999998 8888888776 444444
No 123
>KOG0772|consensus
Probab=98.94 E-value=3.8e-09 Score=52.20 Aligned_cols=60 Identities=22% Similarity=0.389 Sum_probs=46.6
Q ss_pred cceEEEEECCCCCEEEEecCCCcEEEEECCCC--ceEEEeeccCCC--cEeEEEEccCCcEEeC
Q psy7061 6 AYGLHCVFSPDCRLLATTSADQTARIWNTEDF--SLVRELGTANQR--WVWDAAFTLDSKFLLT 65 (65)
Q Consensus 6 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~--~v~~~~~~~~~~~i~s 65 (65)
-.++.+.|++++++++.+..||.+.+|+.... +........|.. .+.++.|+++|++++|
T Consensus 318 v~~tsC~~nrdg~~iAagc~DGSIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlS 381 (641)
T KOG0772|consen 318 VPVTSCAWNRDGKLIAAGCLDGSIQIWDKGSRTVRPVMKVKDAHLPGQDITSISFSYDGNYLLS 381 (641)
T ss_pred cCceeeecCCCcchhhhcccCCceeeeecCCcccccceEeeeccCCCCceeEEEeccccchhhh
Confidence 35788999999999999999999999997532 222222223554 8999999999999875
No 124
>KOG0276|consensus
Probab=98.93 E-value=9.6e-09 Score=51.85 Aligned_cols=63 Identities=24% Similarity=0.419 Sum_probs=53.0
Q ss_pred CCccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 1 l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
|+||...|..+.|+|.-..+++|++|+.+++|+..+.+...++.. .-.++++++-.+....++
T Consensus 223 LeGHt~Nvs~v~fhp~lpiiisgsEDGTvriWhs~Ty~lE~tLn~-gleRvW~I~~~k~~~~i~ 285 (794)
T KOG0276|consen 223 LEGHTNNVSFVFFHPELPIIISGSEDGTVRIWNSKTYKLEKTLNY-GLERVWCIAAHKGDGKIA 285 (794)
T ss_pred hhcccccceEEEecCCCcEEEEecCCccEEEecCcceehhhhhhc-CCceEEEEeecCCCCeEE
Confidence 568999999999999999999999999999999988877777776 567888888777655543
No 125
>KOG0646|consensus
Probab=98.92 E-value=4.2e-09 Score=51.12 Aligned_cols=59 Identities=14% Similarity=0.072 Sum_probs=53.7
Q ss_pred cceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 6 AYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 6 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
+.+.++.-+|.|.+++.+...+.+++|.+.+|..+..+.. |...+.++.|+-|+..++|
T Consensus 82 g~v~al~s~n~G~~l~ag~i~g~lYlWelssG~LL~v~~a-HYQ~ITcL~fs~dgs~iiT 140 (476)
T KOG0646|consen 82 GPVHALASSNLGYFLLAGTISGNLYLWELSSGILLNVLSA-HYQSITCLKFSDDGSHIIT 140 (476)
T ss_pred cceeeeecCCCceEEEeecccCcEEEEEeccccHHHHHHh-hccceeEEEEeCCCcEEEe
Confidence 4577888889999999888999999999999999988887 9999999999999999875
No 126
>KOG0313|consensus
Probab=98.90 E-value=2.2e-08 Score=47.96 Aligned_cols=62 Identities=23% Similarity=0.291 Sum_probs=53.3
Q ss_pred CCccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 1 l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
|.+|+..|..+.|++ ...+.+++.|+.++.||+..+..+..+.. .....++.++|..+.|++
T Consensus 256 l~GHt~~Vs~V~w~d-~~v~yS~SwDHTIk~WDletg~~~~~~~~--~ksl~~i~~~~~~~Ll~~ 317 (423)
T KOG0313|consen 256 LEGHTEPVSSVVWSD-ATVIYSVSWDHTIKVWDLETGGLKSTLTT--NKSLNCISYSPLSKLLAS 317 (423)
T ss_pred ecccccceeeEEEcC-CCceEeecccceEEEEEeecccceeeeec--CcceeEeecccccceeee
Confidence 568999999999998 55688999999999999999988877774 677889999988877764
No 127
>KOG0647|consensus
Probab=98.90 E-value=5.2e-08 Score=45.65 Aligned_cols=57 Identities=14% Similarity=0.228 Sum_probs=48.5
Q ss_pred ccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCc
Q psy7061 3 AHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSK 61 (65)
Q Consensus 3 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 61 (65)
.|.+++.++.|+.+|.++++++.|+.+++|++.++... +... |...|..+.|-+...
T Consensus 70 ~~~~PvL~v~WsddgskVf~g~~Dk~~k~wDL~S~Q~~-~v~~-Hd~pvkt~~wv~~~~ 126 (347)
T KOG0647|consen 70 SHDGPVLDVCWSDDGSKVFSGGCDKQAKLWDLASGQVS-QVAA-HDAPVKTCHWVPGMN 126 (347)
T ss_pred ccCCCeEEEEEccCCceEEeeccCCceEEEEccCCCee-eeee-cccceeEEEEecCCC
Confidence 47889999999999999999999999999999988543 5555 899999999866543
No 128
>KOG1524|consensus
Probab=98.89 E-value=7.8e-09 Score=51.51 Aligned_cols=57 Identities=18% Similarity=0.277 Sum_probs=43.9
Q ss_pred CccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCC
Q psy7061 2 AAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDS 60 (65)
Q Consensus 2 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 60 (65)
+.|.+-|.+++|++.+..++++++|-..++||.... .+.+... |...+.+++|+|+.
T Consensus 183 kAHDGiiL~~~W~~~s~lI~sgGED~kfKvWD~~G~-~Lf~S~~-~ey~ITSva~npd~ 239 (737)
T KOG1524|consen 183 RAHDGLVLSLSWSTQSNIIASGGEDFRFKIWDAQGA-NLFTSAA-EEYAITSVAFNPEK 239 (737)
T ss_pred eccCcEEEEeecCccccceeecCCceeEEeecccCc-ccccCCh-hccceeeeeecccc
Confidence 468889999999999999999999999999997643 3333333 56666666666663
No 129
>KOG0646|consensus
Probab=98.89 E-value=4.1e-09 Score=51.16 Aligned_cols=57 Identities=19% Similarity=0.170 Sum_probs=49.2
Q ss_pred Ccccc--ceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccC
Q psy7061 2 AAHRA--YGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLD 59 (65)
Q Consensus 2 ~~~~~--~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 59 (65)
.+|.+ .|++++++.|+..+++|+.|+.+++|++.+..+++++.. ..+.|+.+++.|-
T Consensus 272 ~Gh~~~~~ITcLais~DgtlLlSGd~dg~VcvWdi~S~Q~iRtl~~-~kgpVtnL~i~~~ 330 (476)
T KOG0646|consen 272 VGHENESAITCLAISTDGTLLLSGDEDGKVCVWDIYSKQCIRTLQT-SKGPVTNLQINPL 330 (476)
T ss_pred ccccCCcceeEEEEecCccEEEeeCCCCCEEEEecchHHHHHHHhh-hccccceeEeecc
Confidence 46777 899999999999999999999999999999988888875 5677887777553
No 130
>KOG0771|consensus
Probab=98.88 E-value=5e-09 Score=50.16 Aligned_cols=56 Identities=30% Similarity=0.349 Sum_probs=46.8
Q ss_pred EEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 9 LHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
..++|..++..+++++.|+.+++|+-.....+..... |...|.++.|+||++.+++
T Consensus 148 k~vaf~~~gs~latgg~dg~lRv~~~Ps~~t~l~e~~-~~~eV~DL~FS~dgk~las 203 (398)
T KOG0771|consen 148 KVVAFNGDGSKLATGGTDGTLRVWEWPSMLTILEEIA-HHAEVKDLDFSPDGKFLAS 203 (398)
T ss_pred eEEEEcCCCCEeeeccccceEEEEecCcchhhhhhHh-hcCccccceeCCCCcEEEE
Confidence 4678889999999999999999999655555545555 8899999999999999874
No 131
>KOG0270|consensus
Probab=98.88 E-value=3.8e-09 Score=51.08 Aligned_cols=58 Identities=17% Similarity=0.236 Sum_probs=49.7
Q ss_pred ccccceEEEEECCC-CCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCc
Q psy7061 3 AHRAYGLHCVFSPD-CRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSK 61 (65)
Q Consensus 3 ~~~~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 61 (65)
+|+..|..+.|... .+.+++++.|..|.+|++.++++...+.. |...|.+++|+|..-
T Consensus 241 gHTdavl~Ls~n~~~~nVLaSgsaD~TV~lWD~~~g~p~~s~~~-~~k~Vq~l~wh~~~p 299 (463)
T KOG0270|consen 241 GHTDAVLALSWNRNFRNVLASGSADKTVKLWDVDTGKPKSSITH-HGKKVQTLEWHPYEP 299 (463)
T ss_pred cchHHHHHHHhccccceeEEecCCCceEEEEEcCCCCcceehhh-cCCceeEEEecCCCc
Confidence 57777888888775 46789999999999999999999888887 899999999998643
No 132
>KOG0308|consensus
Probab=98.88 E-value=3.7e-08 Score=49.85 Aligned_cols=62 Identities=11% Similarity=0.174 Sum_probs=56.8
Q ss_pred ccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 3 AHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 3 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
++...+++++..+.+..+++|+..+.+++|+.++...+..+.+ |...|..+..+.+|+.++|
T Consensus 169 G~k~siYSLA~N~t~t~ivsGgtek~lr~wDprt~~kimkLrG-HTdNVr~ll~~dDGt~~ls 230 (735)
T KOG0308|consen 169 GPKDSIYSLAMNQTGTIIVSGGTEKDLRLWDPRTCKKIMKLRG-HTDNVRVLLVNDDGTRLLS 230 (735)
T ss_pred CCccceeeeecCCcceEEEecCcccceEEeccccccceeeeec-cccceEEEEEcCCCCeEee
Confidence 5677899999999888999999999999999999999999998 9999999999999988865
No 133
>KOG0647|consensus
Probab=98.88 E-value=1.6e-08 Score=47.26 Aligned_cols=60 Identities=28% Similarity=0.336 Sum_probs=46.5
Q ss_pred cceEEEEECCC-CCEEEEecCCCcEEEEECCC-CceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 6 AYGLHCVFSPD-CRLLATTSADQTARIWNTED-FSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 6 ~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
..|..++|+|. ...++.++.|+.|++|+++. +..+..-...+..++.+++|+.+|..+++
T Consensus 28 DsIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~g~~~~ka~~~~~~PvL~v~WsddgskVf~ 89 (347)
T KOG0647|consen 28 DSISALAFSPQADNLLAAGSWDGTVRIWEVQNSGQLVPKAQQSHDGPVLDVCWSDDGSKVFS 89 (347)
T ss_pred cchheeEeccccCceEEecccCCceEEEEEecCCcccchhhhccCCCeEEEEEccCCceEEe
Confidence 46889999994 45677899999999999985 34333322238899999999999988763
No 134
>KOG0300|consensus
Probab=98.86 E-value=5e-09 Score=49.48 Aligned_cols=64 Identities=22% Similarity=0.317 Sum_probs=57.9
Q ss_pred CCccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 1 l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
|++|.+.|.+.+|...++.+++++.|..-.+|+..++..+..+.+ |......++-+|.++.+++
T Consensus 268 ltgH~~vV~a~dWL~gg~Q~vTaSWDRTAnlwDVEtge~v~~LtG-Hd~ELtHcstHptQrLVvT 331 (481)
T KOG0300|consen 268 LTGHRAVVSACDWLAGGQQMVTASWDRTANLWDVETGEVVNILTG-HDSELTHCSTHPTQRLVVT 331 (481)
T ss_pred eeccccceEehhhhcCcceeeeeeccccceeeeeccCceeccccC-cchhccccccCCcceEEEE
Confidence 468999999999999999999999999999999999999999988 8888888888999888764
No 135
>KOG0294|consensus
Probab=98.86 E-value=3.9e-08 Score=46.27 Aligned_cols=61 Identities=16% Similarity=0.205 Sum_probs=49.4
Q ss_pred CCccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEE
Q psy7061 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFL 63 (65)
Q Consensus 1 l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i 63 (65)
+++|.+.|+.++.+|.++..++.+.|+.+++|++-.++....+.- +.....+.|+|.|.++
T Consensus 123 lK~H~~~Vt~lsiHPS~KLALsVg~D~~lr~WNLV~Gr~a~v~~L--~~~at~v~w~~~Gd~F 183 (362)
T KOG0294|consen 123 LKAHKGQVTDLSIHPSGKLALSVGGDQVLRTWNLVRGRVAFVLNL--KNKATLVSWSPQGDHF 183 (362)
T ss_pred ecccccccceeEecCCCceEEEEcCCceeeeehhhcCccceeecc--CCcceeeEEcCCCCEE
Confidence 467999999999999999999999999999999988876655553 2333448999988854
No 136
>KOG1036|consensus
Probab=98.82 E-value=2.6e-08 Score=46.48 Aligned_cols=57 Identities=19% Similarity=0.281 Sum_probs=51.3
Q ss_pred ceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 7 YGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 7 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
+|.+++|+|--..+++++.||.|..|++.+.+.+.++.. ....|..++|+.+|..++
T Consensus 234 PVNai~Fhp~~~tfaTgGsDG~V~~Wd~~~rKrl~q~~~-~~~SI~slsfs~dG~~LA 290 (323)
T KOG1036|consen 234 PVNAIAFHPIHGTFATGGSDGIVNIWDLFNRKRLKQLAK-YETSISSLSFSMDGSLLA 290 (323)
T ss_pred EeceeEeccccceEEecCCCceEEEccCcchhhhhhccC-CCCceEEEEeccCCCeEE
Confidence 578899999877899999999999999999998888887 677899999999998876
No 137
>KOG4227|consensus
Probab=98.82 E-value=2.7e-08 Score=48.23 Aligned_cols=64 Identities=22% Similarity=0.407 Sum_probs=52.4
Q ss_pred CccccceEEEEECCCCCEEEEecCCCcEEEEECC------CCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 2 AAHRAYGLHCVFSPDCRLLATTSADQTARIWNTE------DFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 2 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
.+|.+-|.++.|+.+++++++++.+..+.+|.++ ..+++.....+|+..+.+++|+..-+++++
T Consensus 53 ~~H~GCiNAlqFS~N~~~L~SGGDD~~~~~W~~de~~~~k~~KPI~~~~~~H~SNIF~L~F~~~N~~~~S 122 (609)
T KOG4227|consen 53 REHTGCINALQFSHNDRFLASGGDDMHGRVWNVDELMVRKTPKPIGVMEHPHRSNIFSLEFDLENRFLYS 122 (609)
T ss_pred hhhccccceeeeccCCeEEeecCCcceeeeechHHHHhhcCCCCceeccCccccceEEEEEccCCeeEec
Confidence 4688899999999999999999999999999876 335565555557799999999877666653
No 138
>KOG1538|consensus
Probab=98.80 E-value=6e-08 Score=49.77 Aligned_cols=57 Identities=21% Similarity=0.269 Sum_probs=49.3
Q ss_pred ceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 7 YGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 7 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
-|..++|-|||..++.+. +..+.+||..++....++.+ |.+.|.+++|+.+|+.++|
T Consensus 14 ci~d~afkPDGsqL~lAA-g~rlliyD~ndG~llqtLKg-HKDtVycVAys~dGkrFAS 70 (1081)
T KOG1538|consen 14 CINDIAFKPDGTQLILAA-GSRLLVYDTSDGTLLQPLKG-HKDTVYCVAYAKDGKRFAS 70 (1081)
T ss_pred chheeEECCCCceEEEec-CCEEEEEeCCCccccccccc-ccceEEEEEEccCCceecc
Confidence 577899999997765544 56799999999999999999 9999999999999998765
No 139
>KOG2106|consensus
Probab=98.79 E-value=2.6e-07 Score=46.00 Aligned_cols=61 Identities=21% Similarity=0.254 Sum_probs=48.5
Q ss_pred ccceEEEEECCCCCEEEEecCCCcEEEEECCCC-ceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 5 RAYGLHCVFSPDCRLLATTSADQTARIWNTEDF-SLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 5 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
...+..+.|+|+|..++.++.|..+++|.++.. +........+...+..+.|++|++++.+
T Consensus 447 ~~~ls~v~ysp~G~~lAvgs~d~~iyiy~Vs~~g~~y~r~~k~~gs~ithLDwS~Ds~~~~~ 508 (626)
T KOG2106|consen 447 NEQLSVVRYSPDGAFLAVGSHDNHIYIYRVSANGRKYSRVGKCSGSPITHLDWSSDSQFLVS 508 (626)
T ss_pred CCceEEEEEcCCCCEEEEecCCCeEEEEEECCCCcEEEEeeeecCceeEEeeecCCCceEEe
Confidence 457889999999999999999999999998854 3333333224488999999999998864
No 140
>KOG0305|consensus
Probab=98.78 E-value=1.1e-07 Score=47.05 Aligned_cols=62 Identities=27% Similarity=0.310 Sum_probs=50.4
Q ss_pred CccccceEEEEECCC-CCEEEEec--CCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 2 AAHRAYGLHCVFSPD-CRLLATTS--ADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 2 ~~~~~~v~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
.+|.+.|.+++|+|- ...+++|+ .|+.+++|+...+..+..... ..-|..+.|++..+-+++
T Consensus 340 ~~H~aAVKA~awcP~q~~lLAsGGGs~D~~i~fwn~~~g~~i~~vdt--gsQVcsL~Wsk~~kEi~s 404 (484)
T KOG0305|consen 340 TEHTAAVKALAWCPWQSGLLATGGGSADRCIKFWNTNTGARIDSVDT--GSQVCSLIWSKKYKELLS 404 (484)
T ss_pred eccceeeeEeeeCCCccCceEEcCCCcccEEEEEEcCCCcEeccccc--CCceeeEEEcCCCCEEEE
Confidence 468999999999994 45666655 488999999999988877774 678999999998876653
No 141
>KOG1523|consensus
Probab=98.77 E-value=7.6e-08 Score=45.38 Aligned_cols=63 Identities=14% Similarity=0.133 Sum_probs=50.4
Q ss_pred CCccccceEEEEECCCCCEEEEecCCCcEEEEECC-CCc--eEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTE-DFS--LVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 1 l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
|+.|...++.++|.|.++.|++++.|..-++|.+. .++ ....+.. ++..+.++.|+|.+..++
T Consensus 51 ls~Hd~~vtgvdWap~snrIvtcs~drnayVw~~~~~~~WkptlvLlR-iNrAAt~V~WsP~enkFA 116 (361)
T KOG1523|consen 51 LSEHDKIVTGVDWAPKSNRIVTCSHDRNAYVWTQPSGGTWKPTLVLLR-INRAATCVKWSPKENKFA 116 (361)
T ss_pred hhhhCcceeEEeecCCCCceeEccCCCCccccccCCCCeeccceeEEE-eccceeeEeecCcCceEE
Confidence 35677889999999999999999999999999984 332 2223344 678899999999988775
No 142
>KOG1332|consensus
Probab=98.74 E-value=5.4e-08 Score=44.58 Aligned_cols=61 Identities=18% Similarity=0.152 Sum_probs=48.8
Q ss_pred CCccccceEEEEECC--CCCEEEEecCCCcEEEEECCCCceE--EEeeccCCCcEeEEEEccCCcE
Q psy7061 1 MAAHRAYGLHCVFSP--DCRLLATTSADQTARIWNTEDFSLV--RELGTANQRWVWDAAFTLDSKF 62 (65)
Q Consensus 1 l~~~~~~v~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~ 62 (65)
|.+|.+++..+.|.+ -|..+++++.|+.|.+|.-..++-. ..... |...|++++|.|.+..
T Consensus 52 L~Gh~GPVwqv~wahPk~G~iLAScsYDgkVIiWke~~g~w~k~~e~~~-h~~SVNsV~wapheyg 116 (299)
T KOG1332|consen 52 LTGHSGPVWKVAWAHPKFGTILASCSYDGKVIIWKEENGRWTKAYEHAA-HSASVNSVAWAPHEYG 116 (299)
T ss_pred ecCCCCCeeEEeecccccCcEeeEeecCceEEEEecCCCchhhhhhhhh-hcccceeecccccccc
Confidence 578999999999965 5789999999999999998776432 22334 7899999999987654
No 143
>KOG0639|consensus
Probab=98.73 E-value=5.3e-08 Score=48.43 Aligned_cols=56 Identities=18% Similarity=0.275 Sum_probs=50.7
Q ss_pred eEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 8 GLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 8 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
.+.++.+||.+..+++..++.+.+||+.+...++.+.+ |.+++.++..+++|..|-
T Consensus 512 CyALa~spDakvcFsccsdGnI~vwDLhnq~~VrqfqG-htDGascIdis~dGtklW 567 (705)
T KOG0639|consen 512 CYALAISPDAKVCFSCCSDGNIAVWDLHNQTLVRQFQG-HTDGASCIDISKDGTKLW 567 (705)
T ss_pred hhhhhcCCccceeeeeccCCcEEEEEcccceeeecccC-CCCCceeEEecCCCceee
Confidence 45678899999889999999999999999999999999 999999999999998764
No 144
>KOG0277|consensus
Probab=98.73 E-value=3.2e-07 Score=42.38 Aligned_cols=57 Identities=19% Similarity=0.320 Sum_probs=47.1
Q ss_pred CccccceEEEEECCC-CCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccC
Q psy7061 2 AAHRAYGLHCVFSPD-CRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLD 59 (65)
Q Consensus 2 ~~~~~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 59 (65)
++|..-|+...|+|. .+.+++++.|+.+++|+++.......+.. |...+.++.|+.-
T Consensus 144 ~gh~~~Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr~~gk~~~i~a-h~~Eil~cdw~ky 201 (311)
T KOG0277|consen 144 NGHNSCIYQAAFSPHIPNLFASASGDGTLRLWDVRSPGKFMSIEA-HNSEILCCDWSKY 201 (311)
T ss_pred cCCccEEEEEecCCCCCCeEEEccCCceEEEEEecCCCceeEEEe-ccceeEeeccccc
Confidence 578888999999994 67899999999999999986544445776 7889999999764
No 145
>KOG0290|consensus
Probab=98.69 E-value=1.8e-07 Score=43.91 Aligned_cols=36 Identities=19% Similarity=0.325 Sum_probs=30.6
Q ss_pred CccccceEEEEECCCC-CEEEEecCCCcEEEEECCCC
Q psy7061 2 AAHRAYGLHCVFSPDC-RLLATTSADQTARIWNTEDF 37 (65)
Q Consensus 2 ~~~~~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 37 (65)
-.|...|..++|..++ ..+++.+.||.+++||++..
T Consensus 193 IAHDKEV~DIaf~~~s~~~FASvgaDGSvRmFDLR~l 229 (364)
T KOG0290|consen 193 IAHDKEVYDIAFLKGSRDVFASVGADGSVRMFDLRSL 229 (364)
T ss_pred EecCcceeEEEeccCccceEEEecCCCcEEEEEeccc
Confidence 3588899999999876 57899999999999998853
No 146
>KOG0274|consensus
Probab=98.68 E-value=5.5e-07 Score=45.36 Aligned_cols=57 Identities=18% Similarity=0.177 Sum_probs=49.7
Q ss_pred CCccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEcc
Q psy7061 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTL 58 (65)
Q Consensus 1 l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 58 (65)
+.+|.+.|..+.+...+.++++++.|..+++|+..++.+...+.+ |...+.++...+
T Consensus 245 l~GH~g~V~~l~~~~~~~~lvsgS~D~t~rvWd~~sg~C~~~l~g-h~stv~~~~~~~ 301 (537)
T KOG0274|consen 245 LVGHFGGVWGLAFPSGGDKLVSGSTDKTERVWDCSTGECTHSLQG-HTSSVRCLTIDP 301 (537)
T ss_pred ccCCCCCceeEEEecCCCEEEEEecCCcEEeEecCCCcEEEEecC-CCceEEEEEccC
Confidence 468999999999987778999999999999999999999999998 888888776543
No 147
>KOG1524|consensus
Probab=98.67 E-value=2.4e-08 Score=49.91 Aligned_cols=61 Identities=25% Similarity=0.251 Sum_probs=47.4
Q ss_pred CccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 2 AAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 2 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
..|.+.+.+-.|+|+|.-+++.++||.+++|.-. +-...++.. ....|.|++|.|++..++
T Consensus 101 ~AH~~A~~~gRW~~dGtgLlt~GEDG~iKiWSrs-GMLRStl~Q-~~~~v~c~~W~p~S~~vl 161 (737)
T KOG1524|consen 101 SAHAAAISSGRWSPDGAGLLTAGEDGVIKIWSRS-GMLRSTVVQ-NEESIRCARWAPNSNSIV 161 (737)
T ss_pred hhhhhhhhhcccCCCCceeeeecCCceEEEEecc-chHHHHHhh-cCceeEEEEECCCCCceE
Confidence 3577888999999999999999999999999854 322223333 578899999999876553
No 148
>KOG0771|consensus
Probab=98.66 E-value=4.3e-07 Score=43.87 Aligned_cols=60 Identities=20% Similarity=0.285 Sum_probs=51.5
Q ss_pred cceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 6 AYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 6 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
..|.+++.+.+|+.++.++.++.|.+++..+.+.+.-....|...|..+.|+|+.+.+.+
T Consensus 282 ~siSsl~VS~dGkf~AlGT~dGsVai~~~~~lq~~~~vk~aH~~~VT~ltF~Pdsr~~~s 341 (398)
T KOG0771|consen 282 KSISSLAVSDDGKFLALGTMDGSVAIYDAKSLQRLQYVKEAHLGFVTGLTFSPDSRYLAS 341 (398)
T ss_pred CcceeEEEcCCCcEEEEeccCCcEEEEEeceeeeeEeehhhheeeeeeEEEcCCcCcccc
Confidence 468899999999999999999999999998777666555558899999999999887653
No 149
>KOG0268|consensus
Probab=98.66 E-value=2.3e-08 Score=47.80 Aligned_cols=57 Identities=21% Similarity=0.278 Sum_probs=50.7
Q ss_pred CCccccceEEEEECCCC-CEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEcc
Q psy7061 1 MAAHRAYGLHCVFSPDC-RLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTL 58 (65)
Q Consensus 1 l~~~~~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 58 (65)
|.+|...|.+++=+|+. ..+++|+.||.|++|++....++..+.. |.+.|..++++.
T Consensus 62 L~gHrdGV~~lakhp~~ls~~aSGs~DG~VkiWnlsqR~~~~~f~A-H~G~V~Gi~v~~ 119 (433)
T KOG0268|consen 62 LDGHRDGVSCLAKHPNKLSTVASGSCDGEVKIWNLSQRECIRTFKA-HEGLVRGICVTQ 119 (433)
T ss_pred ccccccccchhhcCcchhhhhhccccCceEEEEehhhhhhhheeec-ccCceeeEEecc
Confidence 46799999999989876 6789999999999999999999999998 899999888865
No 150
>KOG0310|consensus
Probab=98.65 E-value=5.6e-07 Score=44.32 Aligned_cols=60 Identities=22% Similarity=0.307 Sum_probs=50.0
Q ss_pred CCccccceEEEEECCCC-CEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCc
Q psy7061 1 MAAHRAYGLHCVFSPDC-RLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSK 61 (65)
Q Consensus 1 l~~~~~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 61 (65)
+.+|+.++-...|+|.+ ..+++++.|..+++|++.+......+.+ |.+-|.+.+|+|...
T Consensus 106 ~~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a~v~~~l~~-htDYVR~g~~~~~~~ 166 (487)
T KOG0310|consen 106 LYAHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTAYVQAELSG-HTDYVRCGDISPAND 166 (487)
T ss_pred HhhccCceeEEEecccCCeEEEecCCCceEEEEEcCCcEEEEEecC-CcceeEeeccccCCC
Confidence 35789999999999965 5678888888899999998877667777 999999999998654
No 151
>KOG0307|consensus
Probab=98.65 E-value=8.9e-08 Score=50.63 Aligned_cols=60 Identities=22% Similarity=0.411 Sum_probs=53.3
Q ss_pred CCccccceEEEEECCCC-CEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCc
Q psy7061 1 MAAHRAYGLHCVFSPDC-RLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSK 61 (65)
Q Consensus 1 l~~~~~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 61 (65)
+++|+..|.+++|++.+ .++++++.|+.+..|+..+++.+..+.. ..+.+..+.|+|..-
T Consensus 249 ~~~H~~GilslsWc~~D~~lllSsgkD~~ii~wN~~tgEvl~~~p~-~~nW~fdv~w~pr~P 309 (1049)
T KOG0307|consen 249 LEGHQRGILSLSWCPQDPRLLLSSGKDNRIICWNPNTGEVLGELPA-QGNWCFDVQWCPRNP 309 (1049)
T ss_pred hcccccceeeeccCCCCchhhhcccCCCCeeEecCCCceEeeecCC-CCcceeeeeecCCCc
Confidence 35799999999999965 7899999999999999999999999888 789999999998644
No 152
>KOG2139|consensus
Probab=98.65 E-value=5.7e-07 Score=43.34 Aligned_cols=58 Identities=14% Similarity=0.127 Sum_probs=47.9
Q ss_pred cceEEEEECCCCCEEEEecC-CCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 6 AYGLHCVFSPDCRLLATTSA-DQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 6 ~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
..|+.+.|.+++-.+++++. +..+.+|+.+.+..+..... ...++.-+.|+|++.+++
T Consensus 196 ~pVtsmqwn~dgt~l~tAS~gsssi~iWdpdtg~~~pL~~~-glgg~slLkwSPdgd~lf 254 (445)
T KOG2139|consen 196 NPVTSMQWNEDGTILVTASFGSSSIMIWDPDTGQKIPLIPK-GLGGFSLLKWSPDGDVLF 254 (445)
T ss_pred ceeeEEEEcCCCCEEeecccCcceEEEEcCCCCCccccccc-CCCceeeEEEcCCCCEEE
Confidence 57999999999987777664 67899999998877766644 567889999999999876
No 153
>KOG2110|consensus
Probab=98.65 E-value=1.1e-06 Score=42.20 Aligned_cols=58 Identities=16% Similarity=0.084 Sum_probs=46.9
Q ss_pred ceEEEEECCCCCEEEEec--CCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 7 YGLHCVFSPDCRLLATTS--ADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 7 ~v~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
.+.++.+++.+.+++..+ ..|.|.+|+..+.+....+.. |+..+.+++|+++|.+++|
T Consensus 131 gl~AlS~n~~n~ylAyp~s~t~GdV~l~d~~nl~~v~~I~a-H~~~lAalafs~~G~llAT 190 (391)
T KOG2110|consen 131 GLCALSPNNANCYLAYPGSTTSGDVVLFDTINLQPVNTINA-HKGPLAALAFSPDGTLLAT 190 (391)
T ss_pred ceEeeccCCCCceEEecCCCCCceEEEEEcccceeeeEEEe-cCCceeEEEECCCCCEEEE
Confidence 455566665556665543 368899999999999999998 9999999999999999986
No 154
>PRK05137 tolB translocation protein TolB; Provisional
Probab=98.61 E-value=1.1e-06 Score=43.10 Aligned_cols=59 Identities=15% Similarity=0.140 Sum_probs=43.7
Q ss_pred cccceEEEEECCCCCEEEEecC---CCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 4 HRAYGLHCVFSPDCRLLATTSA---DQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 4 ~~~~v~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
+...+....|+|+++.++..+. +..+++|++.++... .+.. ....+...+|+|+++.++
T Consensus 200 ~~~~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g~~~-~l~~-~~g~~~~~~~SPDG~~la 261 (435)
T PRK05137 200 GSSLVLTPRFSPNRQEITYMSYANGRPRVYLLDLETGQRE-LVGN-FPGMTFAPRFSPDGRKVV 261 (435)
T ss_pred CCCCeEeeEECCCCCEEEEEEecCCCCEEEEEECCCCcEE-Eeec-CCCcccCcEECCCCCEEE
Confidence 4557888999999998766543 457999999877653 3333 455677899999998764
No 155
>KOG2055|consensus
Probab=98.61 E-value=1.7e-06 Score=42.70 Aligned_cols=60 Identities=17% Similarity=0.231 Sum_probs=48.1
Q ss_pred cceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 6 AYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 6 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
+.+..+.|+.+++.+..++..+.|++|++....++..+.....-.-.+++.++++.++++
T Consensus 345 G~v~~~~fsSdsk~l~~~~~~GeV~v~nl~~~~~~~rf~D~G~v~gts~~~S~ng~ylA~ 404 (514)
T KOG2055|consen 345 GVVSDFTFSSDSKELLASGGTGEVYVWNLRQNSCLHRFVDDGSVHGTSLCISLNGSYLAT 404 (514)
T ss_pred cEEeeEEEecCCcEEEEEcCCceEEEEecCCcceEEEEeecCccceeeeeecCCCceEEe
Confidence 567889999999988888889999999999888888887622333456777889988875
No 156
>PRK01742 tolB translocation protein TolB; Provisional
Probab=98.61 E-value=7.7e-07 Score=43.61 Aligned_cols=60 Identities=17% Similarity=0.040 Sum_probs=41.2
Q ss_pred ccccceEEEEECCCCCEEEEecCC---CcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 3 AHRAYGLHCVFSPDCRLLATTSAD---QTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 3 ~~~~~v~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
.+...+....|+|+++.++..+.+ ..+++|++.++..... .. .......++|+|+++.|+
T Consensus 201 ~~~~~v~~p~wSPDG~~la~~s~~~~~~~i~i~dl~tg~~~~l-~~-~~g~~~~~~wSPDG~~La 263 (429)
T PRK01742 201 RSSQPLMSPAWSPDGSKLAYVSFENKKSQLVVHDLRSGARKVV-AS-FRGHNGAPAFSPDGSRLA 263 (429)
T ss_pred cCCCccccceEcCCCCEEEEEEecCCCcEEEEEeCCCCceEEE-ec-CCCccCceeECCCCCEEE
Confidence 345568889999999988776543 3689999987654222 22 223345689999998775
No 157
>KOG0301|consensus
Probab=98.60 E-value=9.3e-07 Score=45.32 Aligned_cols=61 Identities=16% Similarity=0.340 Sum_probs=46.0
Q ss_pred CCccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 1 l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
+++|..-|..+.+-+++ .++++++|+.+++|++ ++..+....+ |..-+.++...+++..|+
T Consensus 175 f~gHtD~VRgL~vl~~~-~flScsNDg~Ir~w~~-~ge~l~~~~g-htn~vYsis~~~~~~~Iv 235 (745)
T KOG0301|consen 175 FSGHTDCVRGLAVLDDS-HFLSCSNDGSIRLWDL-DGEVLLEMHG-HTNFVYSISMALSDGLIV 235 (745)
T ss_pred hccchhheeeeEEecCC-CeEeecCCceEEEEec-cCceeeeeec-cceEEEEEEecCCCCeEE
Confidence 35788888888887654 4778888999999998 5777777887 888888888665555554
No 158
>KOG0274|consensus
Probab=98.60 E-value=1e-06 Score=44.48 Aligned_cols=55 Identities=16% Similarity=0.225 Sum_probs=48.5
Q ss_pred CccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccC
Q psy7061 2 AAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLD 59 (65)
Q Consensus 2 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 59 (65)
.+|.+.|.++... +..+++++.++.+.+|++..++.+..+.+ |...|.++.+.+.
T Consensus 328 ~~h~~~V~~v~~~--~~~lvsgs~d~~v~VW~~~~~~cl~sl~g-H~~~V~sl~~~~~ 382 (537)
T KOG0274|consen 328 RGHTGPVNCVQLD--EPLLVSGSYDGTVKVWDPRTGKCLKSLSG-HTGRVYSLIVDSE 382 (537)
T ss_pred ccccccEEEEEec--CCEEEEEecCceEEEEEhhhceeeeeecC-CcceEEEEEecCc
Confidence 3588899999886 78899999999999999999999999999 9999999987663
No 159
>KOG1539|consensus
Probab=98.58 E-value=4.2e-07 Score=47.34 Aligned_cols=62 Identities=26% Similarity=0.406 Sum_probs=48.5
Q ss_pred ccccceEEEEECCCCCEEEEecCCCcEEEEECCCCce-----------------------------------------EE
Q psy7061 3 AHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSL-----------------------------------------VR 41 (65)
Q Consensus 3 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------------------------~~ 41 (65)
.|.+.|..++...-.+.+++++.+|.+.+|+...... .+
T Consensus 491 ah~~~V~gla~D~~n~~~vsa~~~Gilkfw~f~~k~l~~~l~l~~~~~~iv~hr~s~l~a~~~ddf~I~vvD~~t~kvvR 570 (910)
T KOG1539|consen 491 AHKGEVTGLAVDGTNRLLVSAGADGILKFWDFKKKVLKKSLRLGSSITGIVYHRVSDLLAIALDDFSIRVVDVVTRKVVR 570 (910)
T ss_pred cccCceeEEEecCCCceEEEccCcceEEEEecCCcceeeeeccCCCcceeeeeehhhhhhhhcCceeEEEEEchhhhhhH
Confidence 4778899998877677899999999999998765431 11
Q ss_pred EeeccCCCcEeEEEEccCCcEEeC
Q psy7061 42 ELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 42 ~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
.+.+ |.+.+++++|||+|+++++
T Consensus 571 ~f~g-h~nritd~~FS~DgrWlis 593 (910)
T KOG1539|consen 571 EFWG-HGNRITDMTFSPDGRWLIS 593 (910)
T ss_pred Hhhc-cccceeeeEeCCCCcEEEE
Confidence 1223 7899999999999999975
No 160
>KOG1408|consensus
Probab=98.56 E-value=4.6e-07 Score=47.01 Aligned_cols=62 Identities=21% Similarity=0.224 Sum_probs=56.5
Q ss_pred ccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 3 AHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 3 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
+|.++...+...|.|.++++...|..+.++|..++++..+..+ |...|..+.|.+|.+.+++
T Consensus 639 ~~eG~lIKv~lDPSgiY~atScsdktl~~~Df~sgEcvA~m~G-HsE~VTG~kF~nDCkHlIS 700 (1080)
T KOG1408|consen 639 DHEGDLIKVILDPSGIYLATSCSDKTLCFVDFVSGECVAQMTG-HSEAVTGVKFLNDCKHLIS 700 (1080)
T ss_pred cCCCceEEEEECCCccEEEEeecCCceEEEEeccchhhhhhcC-cchheeeeeecccchhhee
Confidence 4667788889999999999999999999999999999999999 9999999999999888764
No 161
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=98.56 E-value=2.9e-06 Score=42.42 Aligned_cols=60 Identities=8% Similarity=0.032 Sum_probs=50.7
Q ss_pred cccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 4 HRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 4 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
..+.|.++..+++|++++.+.....+.+.++++++....-.. ....+..+.|||++++++
T Consensus 400 ~lg~I~av~vs~dGK~~vvaNdr~el~vididngnv~~idkS-~~~lItdf~~~~nsr~iA 459 (668)
T COG4946 400 DLGNIEAVKVSPDGKKVVVANDRFELWVIDIDNGNVRLIDKS-EYGLITDFDWHPNSRWIA 459 (668)
T ss_pred CccceEEEEEcCCCcEEEEEcCceEEEEEEecCCCeeEeccc-ccceeEEEEEcCCceeEE
Confidence 345788999999999999998888999999998887655455 678899999999999886
No 162
>COG2319 FOG: WD40 repeat [General function prediction only]
Probab=98.55 E-value=3.4e-06 Score=39.73 Aligned_cols=59 Identities=29% Similarity=0.376 Sum_probs=50.8
Q ss_pred CccccceEEEEECCCCCEEEEecC-CCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCc
Q psy7061 2 AAHRAYGLHCVFSPDCRLLATTSA-DQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSK 61 (65)
Q Consensus 2 ~~~~~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 61 (65)
..|...+..+.|+|++..++.+.. ++.+++|+......+..+.. |...+..++|+|++.
T Consensus 152 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~ 211 (466)
T COG2319 152 EGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGKPLSTLAG-HTDPVSSLAFSPDGG 211 (466)
T ss_pred ecCcccEEEEEECCCCCEEEecCCCCCceEEEEcCCCceEEeecc-CCCceEEEEEcCCcc
Confidence 357778889999999988887775 99999999998777778887 899999999999886
No 163
>KOG0639|consensus
Probab=98.54 E-value=6.2e-08 Score=48.20 Aligned_cols=62 Identities=16% Similarity=0.200 Sum_probs=51.7
Q ss_pred CCccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 1 l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
+++|+..+.+++.+++|..+=+++.|..|+.||++.++....-. ...-|.++-++|++.+++
T Consensus 547 fqGhtDGascIdis~dGtklWTGGlDntvRcWDlregrqlqqhd--F~SQIfSLg~cP~~dWla 608 (705)
T KOG0639|consen 547 FQGHTDGASCIDISKDGTKLWTGGLDNTVRCWDLREGRQLQQHD--FSSQIFSLGYCPTGDWLA 608 (705)
T ss_pred ccCCCCCceeEEecCCCceeecCCCccceeehhhhhhhhhhhhh--hhhhheecccCCCcccee
Confidence 57899999999999999999999999999999999877554333 466788888888888775
No 164
>KOG2445|consensus
Probab=98.54 E-value=2.3e-06 Score=40.58 Aligned_cols=63 Identities=24% Similarity=0.389 Sum_probs=48.1
Q ss_pred CCccccceEEEEECCC-CC---EEEEecCCCcEEEEECCCC--------------------ceEEEeeccCCCcEeEEEE
Q psy7061 1 MAAHRAYGLHCVFSPD-CR---LLATTSADQTARIWNTEDF--------------------SLVRELGTANQRWVWDAAF 56 (65)
Q Consensus 1 l~~~~~~v~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~v~~~~~ 56 (65)
|.+|+..|..++|.|+ |+ .++++..|| +++|.+... +.+..+.+ |+..|+.+.|
T Consensus 219 L~d~~dpI~di~wAPn~Gr~y~~lAvA~kDg-v~I~~v~~~~s~i~~ee~~~~~~~~~l~v~~vs~~~~-H~~~VWrv~w 296 (361)
T KOG2445|consen 219 LPDHTDPIRDISWAPNIGRSYHLLAVATKDG-VRIFKVKVARSAIEEEEVLAPDLMTDLPVEKVSELDD-HNGEVWRVRW 296 (361)
T ss_pred cCCCCCcceeeeeccccCCceeeEEEeecCc-EEEEEEeeccchhhhhcccCCCCccccceEEeeeccC-CCCceEEEEE
Confidence 3568889999999995 43 578888888 999987621 12333455 8999999999
Q ss_pred ccCCcEEeC
Q psy7061 57 TLDSKFLLT 65 (65)
Q Consensus 57 ~~~~~~i~s 65 (65)
+-.|..|.|
T Consensus 297 NmtGtiLsS 305 (361)
T KOG2445|consen 297 NMTGTILSS 305 (361)
T ss_pred eeeeeEEee
Confidence 999988764
No 165
>PRK02889 tolB translocation protein TolB; Provisional
Probab=98.52 E-value=2.8e-06 Score=41.74 Aligned_cols=59 Identities=15% Similarity=0.006 Sum_probs=42.0
Q ss_pred cccceEEEEECCCCCEEEEecC---CCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 4 HRAYGLHCVFSPDCRLLATTSA---DQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 4 ~~~~v~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
+...+....|+|+++.++..+. ...+++|++.++..... .. ........+|+|+++.++
T Consensus 194 ~~~~v~~p~wSPDG~~la~~s~~~~~~~I~~~dl~~g~~~~l-~~-~~g~~~~~~~SPDG~~la 255 (427)
T PRK02889 194 SPEPIISPAWSPDGTKLAYVSFESKKPVVYVHDLATGRRRVV-AN-FKGSNSAPAWSPDGRTLA 255 (427)
T ss_pred CCCCcccceEcCCCCEEEEEEccCCCcEEEEEECCCCCEEEe-ec-CCCCccceEECCCCCEEE
Confidence 4456778899999988766553 23588999987765433 32 345567899999998775
No 166
>KOG1272|consensus
Probab=98.52 E-value=4.4e-07 Score=44.77 Aligned_cols=59 Identities=19% Similarity=0.272 Sum_probs=43.8
Q ss_pred CccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcE
Q psy7061 2 AAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKF 62 (65)
Q Consensus 2 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 62 (65)
..|.+.|.++++.++|++.++.+.|..+++||++.-....+... ......+++|..+..
T Consensus 290 LcH~g~V~siAv~~~G~YMaTtG~Dr~~kIWDlR~~~ql~t~~t--p~~a~~ls~SqkglL 348 (545)
T KOG1272|consen 290 LCHRGPVSSIAVDRGGRYMATTGLDRKVKIWDLRNFYQLHTYRT--PHPASNLSLSQKGLL 348 (545)
T ss_pred HhcCCCcceEEECCCCcEEeecccccceeEeeeccccccceeec--CCCccccccccccce
Confidence 35889999999999999999999999999999997654444432 234445555555443
No 167
>KOG4328|consensus
Probab=98.52 E-value=5.6e-07 Score=44.22 Aligned_cols=61 Identities=33% Similarity=0.426 Sum_probs=47.0
Q ss_pred cccceEEEEECCCC-CEEEEecCCCcEEEEECCCCc--e--EEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 4 HRAYGLHCVFSPDC-RLLATTSADQTARIWNTEDFS--L--VRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 4 ~~~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
|...|..++++|-. ..+++++.|+..++||++.-. . +..... |+..|.+..|+|.+-.++|
T Consensus 321 h~kKI~sv~~NP~~p~~laT~s~D~T~kIWD~R~l~~K~sp~lst~~-HrrsV~sAyFSPs~gtl~T 386 (498)
T KOG4328|consen 321 HKKKITSVALNPVCPWFLATASLDQTAKIWDLRQLRGKASPFLSTLP-HRRSVNSAYFSPSGGTLLT 386 (498)
T ss_pred hhcccceeecCCCCchheeecccCcceeeeehhhhcCCCCcceeccc-ccceeeeeEEcCCCCceEe
Confidence 66689999999955 568999999999999998422 1 223334 8999999999998765653
No 168
>smart00320 WD40 WD40 repeats. Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.
Probab=98.51 E-value=5.2e-07 Score=28.90 Aligned_cols=31 Identities=35% Similarity=0.634 Sum_probs=27.0
Q ss_pred ccccceEEEEECCCCCEEEEecCCCcEEEEE
Q psy7061 3 AHRAYGLHCVFSPDCRLLATTSADQTARIWN 33 (65)
Q Consensus 3 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 33 (65)
.|...+.++.|.+++..+++++.++.+++|+
T Consensus 10 ~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~ 40 (40)
T smart00320 10 GHTGPVTSVAFSPDGKYLASASDDGTIKLWD 40 (40)
T ss_pred ecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence 4667899999999888999999999999885
No 169
>KOG1034|consensus
Probab=98.51 E-value=4.3e-07 Score=43.18 Aligned_cols=36 Identities=25% Similarity=0.402 Sum_probs=33.4
Q ss_pred CCccccceEEEEECCCCCEEEEecCCCcEEEEECCC
Q psy7061 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTED 36 (65)
Q Consensus 1 l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 36 (65)
+.+|...|.+++|++++..+++++.|+.+++|++..
T Consensus 177 ~egHrdeVLSvD~~~~gd~i~ScGmDhslk~W~l~~ 212 (385)
T KOG1034|consen 177 VEGHRDEVLSVDFSLDGDRIASCGMDHSLKLWRLNV 212 (385)
T ss_pred cccccCcEEEEEEcCCCCeeeccCCcceEEEEecCh
Confidence 367999999999999999999999999999999983
No 170
>KOG1963|consensus
Probab=98.50 E-value=1.8e-06 Score=45.00 Aligned_cols=61 Identities=23% Similarity=0.267 Sum_probs=50.5
Q ss_pred cccceEEEEECCCCCEEEEecCCCcEEEEECCC----CceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 4 HRAYGLHCVFSPDCRLLATTSADQTARIWNTED----FSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 4 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
|+..+.+..++|.++.++++..+|++.+|.-.. ......++. |...|.++.|+++|.+++|
T Consensus 204 Htf~~t~~~~spn~~~~Aa~d~dGrI~vw~d~~~~~~~~t~t~lHW-H~~~V~~L~fS~~G~~LlS 268 (792)
T KOG1963|consen 204 HTFNITCVALSPNERYLAAGDSDGRILVWRDFGSSDDSETCTLLHW-HHDEVNSLSFSSDGAYLLS 268 (792)
T ss_pred hcccceeEEeccccceEEEeccCCcEEEEeccccccccccceEEEe-cccccceeEEecCCceEee
Confidence 555578899999999999999999999996432 234556788 8899999999999999875
No 171
>KOG0321|consensus
Probab=98.50 E-value=3.8e-07 Score=46.34 Aligned_cols=60 Identities=23% Similarity=0.266 Sum_probs=51.3
Q ss_pred ccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEE--eeccCCCcEeEEEEccCCcEE
Q psy7061 3 AHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRE--LGTANQRWVWDAAFTLDSKFL 63 (65)
Q Consensus 3 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~i 63 (65)
.|.+.|..+.|.|....+++.+.|..+++|++...+.+.. +.+ |...|.+++|.|....+
T Consensus 98 aH~nAifDl~wapge~~lVsasGDsT~r~Wdvk~s~l~G~~~~~G-H~~SvkS~cf~~~n~~v 159 (720)
T KOG0321|consen 98 AHKNAIFDLKWAPGESLLVSASGDSTIRPWDVKTSRLVGGRLNLG-HTGSVKSECFMPTNPAV 159 (720)
T ss_pred cccceeEeeccCCCceeEEEccCCceeeeeeeccceeecceeecc-cccccchhhhccCCCcc
Confidence 4888999999999667899999999999999998877766 667 89999999998875544
No 172
>KOG1332|consensus
Probab=98.49 E-value=8.4e-07 Score=40.88 Aligned_cols=63 Identities=21% Similarity=0.395 Sum_probs=48.3
Q ss_pred CCccccceEEEEECCCC----CEEEEecCCCcEEEEECCCC---ceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 1 MAAHRAYGLHCVFSPDC----RLLATTSADQTARIWNTEDF---SLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 1 l~~~~~~v~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
|.+|...|..++|+|.- ..++++++|+.+.+|..+.. .....+.. ....++.+.|++.|..++
T Consensus 203 l~~H~dwVRDVAwaP~~gl~~s~iAS~SqDg~viIwt~~~e~e~wk~tll~~-f~~~~w~vSWS~sGn~La 272 (299)
T KOG1332|consen 203 LEGHKDWVRDVAWAPSVGLPKSTIASCSQDGTVIIWTKDEEYEPWKKTLLEE-FPDVVWRVSWSLSGNILA 272 (299)
T ss_pred hhhcchhhhhhhhccccCCCceeeEEecCCCcEEEEEecCccCccccccccc-CCcceEEEEEeccccEEE
Confidence 56799999999999942 36899999999999987622 12223334 678899999999998775
No 173
>KOG2139|consensus
Probab=98.48 E-value=3e-06 Score=41.03 Aligned_cols=58 Identities=21% Similarity=0.202 Sum_probs=43.9
Q ss_pred cceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 6 AYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 6 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
+.+..+.|+|++.++..+..|+..++|+.....-.....- ..+.|...+|+|+|+.++
T Consensus 239 gg~slLkwSPdgd~lfaAt~davfrlw~e~q~wt~erw~l-gsgrvqtacWspcGsfLL 296 (445)
T KOG2139|consen 239 GGFSLLKWSPDGDVLFAATCDAVFRLWQENQSWTKERWIL-GSGRVQTACWSPCGSFLL 296 (445)
T ss_pred CceeeEEEcCCCCEEEEecccceeeeehhcccceecceec-cCCceeeeeecCCCCEEE
Confidence 4577899999999999999999999996543322222222 345899999999998875
No 174
>KOG2445|consensus
Probab=98.48 E-value=6.4e-06 Score=39.15 Aligned_cols=56 Identities=23% Similarity=0.374 Sum_probs=43.8
Q ss_pred ccccceEEEEECCCCCEEEEecCCCcEEEEECCCC----ceEEEeeccCCCcEeEEEE-ccC
Q psy7061 3 AHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDF----SLVRELGTANQRWVWDAAF-TLD 59 (65)
Q Consensus 3 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~v~~~~~-~~~ 59 (65)
+|..-|.++.|.+.|+.+++++.|..+++|+..+. ........ |...+..+.| +|.
T Consensus 11 ~h~DlihdVs~D~~GRRmAtCSsDq~vkI~d~~~~s~~W~~Ts~Wra-h~~Si~rV~WAhPE 71 (361)
T KOG2445|consen 11 GHKDLIHDVSFDFYGRRMATCSSDQTVKIWDSTSDSGTWSCTSSWRA-HDGSIWRVVWAHPE 71 (361)
T ss_pred CCcceeeeeeecccCceeeeccCCCcEEEEeccCCCCceEEeeeEEe-cCCcEEEEEecCcc
Confidence 47777899999999999999999999999996532 22333445 8889999999 444
No 175
>KOG0649|consensus
Probab=98.47 E-value=2.3e-06 Score=39.60 Aligned_cols=45 Identities=20% Similarity=0.270 Sum_probs=36.1
Q ss_pred CCccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeec
Q psy7061 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGT 45 (65)
Q Consensus 1 l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 45 (65)
+++|+..+-++.-......++++++|+.+++|+.+++++...+..
T Consensus 152 ~rGHtDYvH~vv~R~~~~qilsG~EDGtvRvWd~kt~k~v~~ie~ 196 (325)
T KOG0649|consen 152 YRGHTDYVHSVVGRNANGQILSGAEDGTVRVWDTKTQKHVSMIEP 196 (325)
T ss_pred EcCCcceeeeeeecccCcceeecCCCccEEEEeccccceeEEecc
Confidence 467888888877644455689999999999999999988776653
No 176
>KOG1445|consensus
Probab=98.47 E-value=1.1e-06 Score=45.19 Aligned_cols=58 Identities=21% Similarity=0.154 Sum_probs=50.4
Q ss_pred ceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 7 YGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 7 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
.+.++.|+|...-++..+..+.+++||+.+++.+..+.. |...|.++.|+.+|..+++
T Consensus 130 ~vE~l~fHpTaDgil~s~a~g~v~i~D~stqk~~~el~~-h~d~vQSa~WseDG~llat 187 (1012)
T KOG1445|consen 130 IVECLRFHPTADGILASGAHGSVYITDISTQKTAVELSG-HTDKVQSADWSEDGKLLAT 187 (1012)
T ss_pred EEEEeecccCcCceEEeccCceEEEEEcccCceeecccC-CchhhhccccccCCceEee
Confidence 467888999766666667789999999999999999998 9999999999999998864
No 177
>KOG2919|consensus
Probab=98.46 E-value=1.5e-06 Score=41.49 Aligned_cols=55 Identities=20% Similarity=0.276 Sum_probs=43.6
Q ss_pred EEEEECCCCCEEEEecCCCcEEEEECCC-CceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 9 LHCVFSPDCRLLATTSADQTARIWNTED-FSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
...+..|+++++++++.++.|++|+++. +.....+.. +...++.++++|--..++
T Consensus 301 I~FDld~~~~~LasG~tdG~V~vwdlk~~gn~~sv~~~-~sd~vNgvslnP~mpila 356 (406)
T KOG2919|consen 301 ILFDLDPKGEILASGDTDGSVRVWDLKDLGNEVSVTGN-YSDTVNGVSLNPIMPILA 356 (406)
T ss_pred EEEecCCCCceeeccCCCccEEEEecCCCCCccccccc-ccccccceecCcccceee
Confidence 3456678899999999999999999997 555556666 788899999998755544
No 178
>KOG0299|consensus
Probab=98.46 E-value=3.7e-06 Score=41.45 Aligned_cols=57 Identities=26% Similarity=0.316 Sum_probs=46.3
Q ss_pred cceEEEEECCCCCEEEEecCCCcEEEEECCCC----ceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 6 AYGLHCVFSPDCRLLATTSADQTARIWNTEDF----SLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 6 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
..|+++...|...++++++.++.|++|.+.++ +.+..+. -...|+.++|+++|+.|+
T Consensus 381 ~Witsla~i~~sdL~asGS~~G~vrLW~i~~g~r~i~~l~~ls--~~GfVNsl~f~~sgk~iv 441 (479)
T KOG0299|consen 381 FWITSLAVIPGSDLLASGSWSGCVRLWKIEDGLRAINLLYSLS--LVGFVNSLAFSNSGKRIV 441 (479)
T ss_pred cceeeeEecccCceEEecCCCCceEEEEecCCccccceeeecc--cccEEEEEEEccCCCEEE
Confidence 37888999999999999999999999998865 2333333 468899999999999664
No 179
>KOG0288|consensus
Probab=98.45 E-value=5e-07 Score=43.94 Aligned_cols=58 Identities=22% Similarity=0.319 Sum_probs=50.2
Q ss_pred ccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCc
Q psy7061 3 AHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSK 61 (65)
Q Consensus 3 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 61 (65)
+-.+.++.++|.++++.+++++.++.+++|+.+..+...++.+ |...|.++.|.....
T Consensus 217 Gs~g~it~~d~d~~~~~~iAas~d~~~r~Wnvd~~r~~~TLsG-HtdkVt~ak~~~~~~ 274 (459)
T KOG0288|consen 217 GSLGNITSIDFDSDNKHVIAASNDKNLRLWNVDSLRLRHTLSG-HTDKVTAAKFKLSHS 274 (459)
T ss_pred ccCCCcceeeecCCCceEEeecCCCceeeeeccchhhhhhhcc-cccceeeehhhcccc
Confidence 4456799999999999999999999999999999999889999 999999888765543
No 180
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=98.44 E-value=9.5e-06 Score=39.43 Aligned_cols=54 Identities=22% Similarity=0.235 Sum_probs=42.0
Q ss_pred EEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 9 LHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
..+.++|+++++...+.++.+.++|+.+.+.+..... ......++++++|++++
T Consensus 40 ~~~~~s~Dgr~~yv~~rdg~vsviD~~~~~~v~~i~~--G~~~~~i~~s~DG~~~~ 93 (369)
T PF02239_consen 40 AGLKFSPDGRYLYVANRDGTVSVIDLATGKVVATIKV--GGNPRGIAVSPDGKYVY 93 (369)
T ss_dssp EEEE-TT-SSEEEEEETTSEEEEEETTSSSEEEEEE---SSEEEEEEE--TTTEEE
T ss_pred eEEEecCCCCEEEEEcCCCeEEEEECCcccEEEEEec--CCCcceEEEcCCCCEEE
Confidence 4467899999888888899999999999998888875 55678899999999886
No 181
>KOG1274|consensus
Probab=98.43 E-value=3.3e-06 Score=44.51 Aligned_cols=60 Identities=18% Similarity=0.180 Sum_probs=53.9
Q ss_pred ccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 5 RAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 5 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
+-.+..+.|+.+|++++.++.|-.|++.+..+......+.+ |...|.++.|+|++.++++
T Consensus 96 tlp~r~~~v~g~g~~iaagsdD~~vK~~~~~D~s~~~~lrg-h~apVl~l~~~p~~~fLAv 155 (933)
T KOG1274|consen 96 TLPIRDLAVSGSGKMIAAGSDDTAVKLLNLDDSSQEKVLRG-HDAPVLQLSYDPKGNFLAV 155 (933)
T ss_pred eccceEEEEecCCcEEEeecCceeEEEEeccccchheeecc-cCCceeeeeEcCCCCEEEE
Confidence 34677889999999999999999999999998888888888 9999999999999998874
No 182
>KOG0644|consensus
Probab=98.42 E-value=5.8e-08 Score=50.64 Aligned_cols=59 Identities=22% Similarity=0.238 Sum_probs=52.5
Q ss_pred CCccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCC
Q psy7061 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDS 60 (65)
Q Consensus 1 l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 60 (65)
+.||.+.+..+..+.+.-.+++++.|..+++|.+.++..+..+.+ |.+.|+.++|+|..
T Consensus 228 ~rGhs~ditdlavs~~n~~iaaaS~D~vIrvWrl~~~~pvsvLrg-htgavtaiafsP~~ 286 (1113)
T KOG0644|consen 228 CRGHSGDITDLAVSSNNTMIAAASNDKVIRVWRLPDGAPVSVLRG-HTGAVTAIAFSPRA 286 (1113)
T ss_pred CCCCccccchhccchhhhhhhhcccCceEEEEecCCCchHHHHhc-cccceeeeccCccc
Confidence 368999999998877777889999999999999999999989998 99999999999854
No 183
>KOG1963|consensus
Probab=98.41 E-value=2.3e-06 Score=44.62 Aligned_cols=61 Identities=16% Similarity=0.071 Sum_probs=50.4
Q ss_pred CccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 2 AAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 2 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
..|...|.++.|+++|..+.+|+..+.+-+|.+.+++.. -+.. -...+..+.++|++.+..
T Consensus 248 HWH~~~V~~L~fS~~G~~LlSGG~E~VLv~Wq~~T~~kq-fLPR-Lgs~I~~i~vS~ds~~~s 308 (792)
T KOG1963|consen 248 HWHHDEVNSLSFSSDGAYLLSGGREGVLVLWQLETGKKQ-FLPR-LGSPILHIVVSPDSDLYS 308 (792)
T ss_pred EecccccceeEEecCCceEeecccceEEEEEeecCCCcc-cccc-cCCeeEEEEEcCCCCeEE
Confidence 357789999999999999999999999999999988732 2222 568899999999988754
No 184
>KOG2055|consensus
Probab=98.40 E-value=6e-06 Score=40.92 Aligned_cols=55 Identities=18% Similarity=0.215 Sum_probs=46.3
Q ss_pred cceEEEEECCCCCEEEEecCCCcEEEEECCC--CceEEEeeccCCCcEeEEEEccCCc
Q psy7061 6 AYGLHCVFSPDCRLLATTSADQTARIWNTED--FSLVRELGTANQRWVWDAAFTLDSK 61 (65)
Q Consensus 6 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~v~~~~~~~~~~ 61 (65)
+.|.++.|+|..+.+++++.++.+++|.++. ...+..+.- ...++.+.+|.|+|.
T Consensus 214 ~~I~sv~FHp~~plllvaG~d~~lrifqvDGk~N~~lqS~~l-~~fPi~~a~f~p~G~ 270 (514)
T KOG2055|consen 214 GGITSVQFHPTAPLLLVAGLDGTLRIFQVDGKVNPKLQSIHL-EKFPIQKAEFAPNGH 270 (514)
T ss_pred CCceEEEecCCCceEEEecCCCcEEEEEecCccChhheeeee-ccCccceeeecCCCc
Confidence 5799999999999999999999999998873 344555555 678899999999998
No 185
>KOG0644|consensus
Probab=98.40 E-value=1.7e-07 Score=49.02 Aligned_cols=58 Identities=21% Similarity=0.288 Sum_probs=51.5
Q ss_pred CCccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccC
Q psy7061 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLD 59 (65)
Q Consensus 1 l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 59 (65)
|.+|.+.|+++.|...|..+++++.+..+++|...++.+.....+ |...+..++.+.+
T Consensus 186 LlgH~naVyca~fDrtg~~Iitgsdd~lvKiwS~et~~~lAs~rG-hs~ditdlavs~~ 243 (1113)
T KOG0644|consen 186 LLGHRNAVYCAIFDRTGRYIITGSDDRLVKIWSMETARCLASCRG-HSGDITDLAVSSN 243 (1113)
T ss_pred HHhhhhheeeeeeccccceEeecCccceeeeeeccchhhhccCCC-Cccccchhccchh
Confidence 457999999999999999999999999999999999999999998 8888888776544
No 186
>KOG2919|consensus
Probab=98.39 E-value=7.6e-06 Score=39.23 Aligned_cols=60 Identities=23% Similarity=0.222 Sum_probs=50.4
Q ss_pred ccceEEEEECCC-CCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 5 RAYGLHCVFSPD-CRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 5 ~~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
.+-+.+++|+|- ...++.++....+-+|.-.....+..+.+ |.++|+.++|.++|..+++
T Consensus 207 ~giisc~a~sP~~~~~~a~gsY~q~~giy~~~~~~pl~llgg-h~gGvThL~~~edGn~lfs 267 (406)
T KOG2919|consen 207 KGIISCFAFSPMDSKTLAVGSYGQRVGIYNDDGRRPLQLLGG-HGGGVTHLQWCEDGNKLFS 267 (406)
T ss_pred cceeeeeeccCCCCcceeeecccceeeeEecCCCCceeeecc-cCCCeeeEEeccCcCeecc
Confidence 345778899994 56788888888888888888888888888 9999999999999988764
No 187
>KOG0641|consensus
Probab=98.38 E-value=1.5e-05 Score=36.75 Aligned_cols=61 Identities=15% Similarity=0.104 Sum_probs=48.8
Q ss_pred ccccceEEEEECCCCCEEEEecCCCcEEEEECCC----CceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 3 AHRAYGLHCVFSPDCRLLATTSADQTARIWNTED----FSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 3 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
.|+.+|.++.|+|.-.++++++.|-.+++-+++. .-.+..... |...+..+.|+|..-.++
T Consensus 271 phsadir~vrfsp~a~yllt~syd~~ikltdlqgdla~el~~~vv~e-hkdk~i~~rwh~~d~sfi 335 (350)
T KOG0641|consen 271 PHSADIRCVRFSPGAHYLLTCSYDMKIKLTDLQGDLAHELPIMVVAE-HKDKAIQCRWHPQDFSFI 335 (350)
T ss_pred CCccceeEEEeCCCceEEEEecccceEEEeecccchhhcCceEEEEe-ccCceEEEEecCccceee
Confidence 5888999999999888999999999999998873 223444445 899999999999765443
No 188
>KOG0642|consensus
Probab=98.38 E-value=2.9e-06 Score=42.70 Aligned_cols=62 Identities=26% Similarity=0.240 Sum_probs=49.2
Q ss_pred CccccceEEEEECCCCCEEEEecCCCcEEEEECCC------C----ceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 2 AAHRAYGLHCVFSPDCRLLATTSADQTARIWNTED------F----SLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 2 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~----~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
.+|.++|.++.+.++++.+.+++-|+.++.|++.. . .....+.+ |...++.+++|+....++
T Consensus 341 raH~gPVl~v~v~~n~~~~ysgg~Dg~I~~w~~p~n~dp~ds~dp~vl~~~l~G-htdavw~l~~s~~~~~Ll 412 (577)
T KOG0642|consen 341 RAHEGPVLCVVVPSNGEHCYSGGIDGTIRCWNLPPNQDPDDSYDPSVLSGTLLG-HTDAVWLLALSSTKDRLL 412 (577)
T ss_pred ecccCceEEEEecCCceEEEeeccCceeeeeccCCCCCcccccCcchhccceec-cccceeeeeeccccccee
Confidence 57999999999999999999999999999995541 1 12334555 889999999988766654
No 189
>KOG0290|consensus
Probab=98.38 E-value=1.7e-06 Score=40.78 Aligned_cols=59 Identities=17% Similarity=0.209 Sum_probs=43.9
Q ss_pred CCccccceEEEEECCCC-CEEEEecCCCcEEEEECCCCce--EE--EeeccCCCcEeEEEEccC
Q psy7061 1 MAAHRAYGLHCVFSPDC-RLLATTSADQTARIWNTEDFSL--VR--ELGTANQRWVWDAAFTLD 59 (65)
Q Consensus 1 l~~~~~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~~~~v~~~~~~~~ 59 (65)
|+.|++.|..++|.|.+ ..+++++.|..+-+|++..... +. .+......+|..++|++.
T Consensus 283 L~~H~a~VNgIaWaPhS~~hictaGDD~qaliWDl~q~~~~~~~dPilay~a~~EVNqi~Ws~~ 346 (364)
T KOG0290|consen 283 LRNHQASVNGIAWAPHSSSHICTAGDDCQALIWDLQQMPRENGEDPILAYTAGGEVNQIQWSSS 346 (364)
T ss_pred hhcCcccccceEecCCCCceeeecCCcceEEEEecccccccCCCCchhhhhccceeeeeeeccc
Confidence 56899999999999964 6899999999999999974221 11 111124678999999854
No 190
>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats.
Probab=98.38 E-value=8.9e-06 Score=41.12 Aligned_cols=58 Identities=16% Similarity=0.124 Sum_probs=45.6
Q ss_pred cccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 4 HRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 4 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
....+.+++++|+..+++.|..|+.+.+|+...+... ... .......++|+|+|..++
T Consensus 258 L~s~v~~ca~sp~E~kLvlGC~DgSiiLyD~~~~~t~--~~k-a~~~P~~iaWHp~gai~~ 315 (545)
T PF11768_consen 258 LPSQVICCARSPSEDKLVLGCEDGSIILYDTTRGVTL--LAK-AEFIPTLIAWHPDGAIFV 315 (545)
T ss_pred cCCcceEEecCcccceEEEEecCCeEEEEEcCCCeee--eee-ecccceEEEEcCCCcEEE
Confidence 3457889999999999999999999999998755332 333 456678899999987764
No 191
>KOG4378|consensus
Probab=98.37 E-value=2.5e-06 Score=42.80 Aligned_cols=61 Identities=23% Similarity=0.246 Sum_probs=50.3
Q ss_pred CccccceEEEEECCCC-CEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 2 AAHRAYGLHCVFSPDC-RLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 2 ~~~~~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
+.|..+...++|+|.. ..+++.+.|..+.+||.........+.. ..+...++|.++|.+++
T Consensus 205 ~~HsAP~~gicfspsne~l~vsVG~Dkki~~yD~~s~~s~~~l~y--~~Plstvaf~~~G~~L~ 266 (673)
T KOG4378|consen 205 EAHSAPCRGICFSPSNEALLVSVGYDKKINIYDIRSQASTDRLTY--SHPLSTVAFSECGTYLC 266 (673)
T ss_pred hhccCCcCcceecCCccceEEEecccceEEEeecccccccceeee--cCCcceeeecCCceEEE
Confidence 3477888899999954 5788999999999999997777666664 56788999999998875
No 192
>KOG1188|consensus
Probab=98.35 E-value=2.7e-06 Score=40.68 Aligned_cols=57 Identities=14% Similarity=0.137 Sum_probs=41.7
Q ss_pred ccccceEEEEECCC-CCEEEEecCCCcEEEEECCCCc---eEEEeeccCCCcEeEEEEccCC
Q psy7061 3 AHRAYGLHCVFSPD-CRLLATTSADQTARIWNTEDFS---LVRELGTANQRWVWDAAFTLDS 60 (65)
Q Consensus 3 ~~~~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~v~~~~~~~~~ 60 (65)
.|..+|+.+.|+|. .+++++++.||.+.+|++.... .+..... +...|..+.|..++
T Consensus 163 SH~DDVT~lrFHP~~pnlLlSGSvDGLvnlfD~~~d~EeDaL~~viN-~~sSI~~igw~~~~ 223 (376)
T KOG1188|consen 163 SHNDDVTQLRFHPSDPNLLLSGSVDGLVNLFDTKKDNEEDALLHVIN-HGSSIHLIGWLSKK 223 (376)
T ss_pred hccCcceeEEecCCCCCeEEeecccceEEeeecCCCcchhhHHHhhc-ccceeeeeeeecCC
Confidence 58899999999995 5799999999999999987432 1222222 45667777776554
No 193
>KOG4283|consensus
Probab=98.34 E-value=6.9e-06 Score=39.01 Aligned_cols=58 Identities=19% Similarity=0.244 Sum_probs=48.2
Q ss_pred cceEEEEECCC-C-C-EEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 6 AYGLHCVFSPD-C-R-LLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 6 ~~v~~~~~~~~-~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
+.|+.-.++|- . . .++++..+-.|++.|+.++.....+.+ |+.+|..+.|+|...+++
T Consensus 144 ~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SGs~sH~LsG-Hr~~vlaV~Wsp~~e~vL 204 (397)
T KOG4283|consen 144 GKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASGSFSHTLSG-HRDGVLAVEWSPSSEWVL 204 (397)
T ss_pred ceeehhhcChhhhcceEEEEecCCCcEEEEeccCCcceeeecc-ccCceEEEEeccCceeEE
Confidence 45666777773 2 2 467778888999999999999999999 999999999999988775
No 194
>PRK00178 tolB translocation protein TolB; Provisional
Probab=98.34 E-value=1.2e-05 Score=39.45 Aligned_cols=59 Identities=19% Similarity=0.051 Sum_probs=40.3
Q ss_pred cccceEEEEECCCCCEEEEecCC---CcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 4 HRAYGLHCVFSPDCRLLATTSAD---QTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 4 ~~~~v~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
+...+....|+|+++.++..+.+ ..++++++.++..... .. ........+|+|+++.++
T Consensus 197 ~~~~~~~p~wSpDG~~la~~s~~~~~~~l~~~~l~~g~~~~l-~~-~~g~~~~~~~SpDG~~la 258 (430)
T PRK00178 197 SREPILSPRWSPDGKRIAYVSFEQKRPRIFVQNLDTGRREQI-TN-FEGLNGAPAWSPDGSKLA 258 (430)
T ss_pred CCCceeeeeECCCCCEEEEEEcCCCCCEEEEEECCCCCEEEc-cC-CCCCcCCeEECCCCCEEE
Confidence 33456788999999887665432 3588889887765432 22 334455789999998775
No 195
>PRK03629 tolB translocation protein TolB; Provisional
Probab=98.33 E-value=1.3e-05 Score=39.54 Aligned_cols=57 Identities=19% Similarity=0.124 Sum_probs=39.5
Q ss_pred cceEEEEECCCCCEEEEec---CCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 6 AYGLHCVFSPDCRLLATTS---ADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 6 ~~v~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
..+....|+|+|+.++..+ .+..++++++..++... +.. .......++|+|+|+.|+
T Consensus 199 ~~~~~p~wSPDG~~la~~s~~~g~~~i~i~dl~~G~~~~-l~~-~~~~~~~~~~SPDG~~La 258 (429)
T PRK03629 199 QPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQ-VAS-FPRHNGAPAFSPDGSKLA 258 (429)
T ss_pred CceeeeEEcCCCCEEEEEEecCCCcEEEEEECCCCCeEE-ccC-CCCCcCCeEECCCCCEEE
Confidence 4577899999998876543 23468888988765432 222 234456789999999875
No 196
>KOG0307|consensus
Probab=98.33 E-value=7.3e-07 Score=47.45 Aligned_cols=58 Identities=21% Similarity=0.184 Sum_probs=44.9
Q ss_pred CccccceEEEEECCCC-CEEEEecCCCcEEEEECCCCceEEEeec-cCCCcEeEEEEccC
Q psy7061 2 AAHRAYGLHCVFSPDC-RLLATTSADQTARIWNTEDFSLVRELGT-ANQRWVWDAAFTLD 59 (65)
Q Consensus 2 ~~~~~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~ 59 (65)
..|.+.|..++|.+.+ +++++|+.++.+.+||+...+.-..+.. .....|.+++|+..
T Consensus 113 ~~h~G~V~gLDfN~~q~nlLASGa~~geI~iWDlnn~~tP~~~~~~~~~~eI~~lsWNrk 172 (1049)
T KOG0307|consen 113 SKHTGPVLGLDFNPFQGNLLASGADDGEILIWDLNKPETPFTPGSQAPPSEIKCLSWNRK 172 (1049)
T ss_pred cccCCceeeeeccccCCceeeccCCCCcEEEeccCCcCCCCCCCCCCCcccceEeccchh
Confidence 4589999999999965 6999999999999999986544333322 14578888888754
No 197
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=98.32 E-value=1.9e-05 Score=36.47 Aligned_cols=54 Identities=20% Similarity=0.359 Sum_probs=40.0
Q ss_pred EEEEECCCCCEE-EEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 9 LHCVFSPDCRLL-ATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 9 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
..+.|+|+++.+ +....+..+.+|+..+++...... +...+.+++|+|+++.++
T Consensus 210 ~~i~~s~dg~~~~~~~~~~~~i~v~d~~~~~~~~~~~--~~~~~~~~~~~~~g~~l~ 264 (300)
T TIGR03866 210 VGIKLTKDGKTAFVALGPANRVAVVDAKTYEVLDYLL--VGQRVWQLAFTPDEKYLL 264 (300)
T ss_pred cceEECCCCCEEEEEcCCCCeEEEEECCCCcEEEEEE--eCCCcceEEECCCCCEEE
Confidence 357789988864 444556679999998877665543 345788999999998875
No 198
>PRK04922 tolB translocation protein TolB; Provisional
Probab=98.31 E-value=7.5e-06 Score=40.31 Aligned_cols=59 Identities=17% Similarity=0.055 Sum_probs=40.7
Q ss_pred cccceEEEEECCCCCEEEEecC---CCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 4 HRAYGLHCVFSPDCRLLATTSA---DQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 4 ~~~~v~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
+...+....|+|+++.++..+. ...+++|++..+.... +.. ........+|+|+++.++
T Consensus 202 ~~~~v~~p~wSpDg~~la~~s~~~~~~~l~~~dl~~g~~~~-l~~-~~g~~~~~~~SpDG~~l~ 263 (433)
T PRK04922 202 SAEPILSPAWSPDGKKLAYVSFERGRSAIYVQDLATGQREL-VAS-FRGINGAPSFSPDGRRLA 263 (433)
T ss_pred CCCccccccCCCCCCEEEEEecCCCCcEEEEEECCCCCEEE-ecc-CCCCccCceECCCCCEEE
Confidence 3445778899999998776653 3468889988766533 333 334455789999998764
No 199
>KOG4497|consensus
Probab=98.27 E-value=2.1e-05 Score=37.94 Aligned_cols=58 Identities=24% Similarity=0.174 Sum_probs=44.0
Q ss_pred ccceEEEEECCCCCE-EEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 5 RAYGLHCVFSPDCRL-LATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 5 ~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
+..+....|+|+|+. +.+..-+.++.+|.+.+........ .+..+..++|+|+|++.+
T Consensus 91 ~agls~~~WSPdgrhiL~tseF~lriTVWSL~t~~~~~~~~--pK~~~kg~~f~~dg~f~a 149 (447)
T KOG4497|consen 91 QAGLSSISWSPDGRHILLTSEFDLRITVWSLNTQKGYLLPH--PKTNVKGYAFHPDGQFCA 149 (447)
T ss_pred CCcceeeeECCCcceEeeeecceeEEEEEEeccceeEEecc--cccCceeEEECCCCceee
Confidence 456788999999965 5666668899999998776654433 455668999999998764
No 200
>KOG4547|consensus
Probab=98.26 E-value=2.4e-05 Score=39.56 Aligned_cols=52 Identities=21% Similarity=0.222 Sum_probs=44.7
Q ss_pred ccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccC
Q psy7061 5 RAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLD 59 (65)
Q Consensus 5 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 59 (65)
+..+..+.++||+..+++++ +.+++|++.+.+.+..+.+ |...|.+++|.-+
T Consensus 144 ~~~~~sl~is~D~~~l~~as--~~ik~~~~~~kevv~~ftg-h~s~v~t~~f~~~ 195 (541)
T KOG4547|consen 144 KPLVSSLCISPDGKILLTAS--RQIKVLDIETKEVVITFTG-HGSPVRTLSFTTL 195 (541)
T ss_pred CCccceEEEcCCCCEEEecc--ceEEEEEccCceEEEEecC-CCcceEEEEEEEe
Confidence 34577888999988887765 6899999999999999999 9999999999766
No 201
>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....
Probab=98.26 E-value=4.8e-06 Score=27.59 Aligned_cols=27 Identities=22% Similarity=0.322 Sum_probs=22.8
Q ss_pred ceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 38 SLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 38 ~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
+.+..+.. |...|.+++|+|++..+++
T Consensus 2 ~~~~~~~~-h~~~i~~i~~~~~~~~~~s 28 (39)
T PF00400_consen 2 KCVRTFRG-HSSSINSIAWSPDGNFLAS 28 (39)
T ss_dssp EEEEEEES-SSSSEEEEEEETTSSEEEE
T ss_pred eEEEEEcC-CCCcEEEEEEeccccccee
Confidence 45667777 9999999999999988874
No 202
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=98.25 E-value=2.2e-05 Score=38.24 Aligned_cols=57 Identities=19% Similarity=0.059 Sum_probs=39.8
Q ss_pred cceEEEEECCCCCEEEEecCC---CcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 6 AYGLHCVFSPDCRLLATTSAD---QTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 6 ~~v~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
..+....|+|+++.++..... ..+++|++.++..... .. ....+..++|+|+++.++
T Consensus 190 ~~~~~p~~Spdg~~la~~~~~~~~~~i~v~d~~~g~~~~~-~~-~~~~~~~~~~spDg~~l~ 249 (417)
T TIGR02800 190 EPILSPAWSPDGQKLAYVSFESGKPEIYVQDLATGQREKV-AS-FPGMNGAPAFSPDGSKLA 249 (417)
T ss_pred CceecccCCCCCCEEEEEEcCCCCcEEEEEECCCCCEEEe-ec-CCCCccceEECCCCCEEE
Confidence 346678899999987765533 4688999887654332 23 345566789999998664
No 203
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=98.25 E-value=2.6e-05 Score=36.01 Aligned_cols=51 Identities=16% Similarity=0.340 Sum_probs=39.8
Q ss_pred cceEEEEECCCCCEEEEe-cCCCcEEEEECCCCceEEEeeccCCCcEeEEEEcc
Q psy7061 6 AYGLHCVFSPDCRLLATT-SADQTARIWNTEDFSLVRELGTANQRWVWDAAFTL 58 (65)
Q Consensus 6 ~~v~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 58 (65)
..+..+.|+|+++.++++ ..++.+.+|++.+++.+..+.. ....+.++++|
T Consensus 249 ~~~~~~~~~~~g~~l~~~~~~~~~i~v~d~~~~~~~~~~~~--~~~~~~~~~~~ 300 (300)
T TIGR03866 249 QRVWQLAFTPDEKYLLTTNGVSNDVSVIDVAALKVIKSIKV--GRLPWGVVVRP 300 (300)
T ss_pred CCcceEEECCCCCEEEEEcCCCCeEEEEECCCCcEEEEEEc--ccccceeEeCC
Confidence 356788999999988765 4689999999999998888765 35557777764
No 204
>KOG1272|consensus
Probab=98.21 E-value=1.6e-06 Score=42.97 Aligned_cols=58 Identities=10% Similarity=0.101 Sum_probs=48.4
Q ss_pred ceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 7 YGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 7 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
.+......|-...+-.|..+|.|.+|...+...+..+.. |...|.++++.++|++++|
T Consensus 253 ~~~vm~qNP~NaVih~GhsnGtVSlWSP~skePLvKiLc-H~g~V~siAv~~~G~YMaT 310 (545)
T KOG1272|consen 253 RTDVMKQNPYNAVIHLGHSNGTVSLWSPNSKEPLVKILC-HRGPVSSIAVDRGGRYMAT 310 (545)
T ss_pred ccchhhcCCccceEEEcCCCceEEecCCCCcchHHHHHh-cCCCcceEEECCCCcEEee
Confidence 334445556555677888899999999999999888888 9999999999999999986
No 205
>KOG0301|consensus
Probab=98.21 E-value=5.8e-05 Score=39.26 Aligned_cols=60 Identities=20% Similarity=0.416 Sum_probs=46.7
Q ss_pred CccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 2 AAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 2 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
.+|++.+++++..+++..++++++|+.+++|... .+...+.- ..-.++++.+=++|+.+.
T Consensus 216 ~ghtn~vYsis~~~~~~~Ivs~gEDrtlriW~~~--e~~q~I~l-PttsiWsa~~L~NgDIvv 275 (745)
T KOG0301|consen 216 HGHTNFVYSISMALSDGLIVSTGEDRTLRIWKKD--ECVQVITL-PTTSIWSAKVLLNGDIVV 275 (745)
T ss_pred eccceEEEEEEecCCCCeEEEecCCceEEEeecC--ceEEEEec-CccceEEEEEeeCCCEEE
Confidence 4788999999988888899999999999999976 44445543 445788887777776653
No 206
>KOG0642|consensus
Probab=98.19 E-value=4.8e-06 Score=41.94 Aligned_cols=61 Identities=18% Similarity=0.250 Sum_probs=49.3
Q ss_pred cccceEEEEECCCCCEEEEecCCCcEEEEECCC--------CceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 4 HRAYGLHCVFSPDCRLLATTSADQTARIWNTED--------FSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 4 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
|..-+....|.+....+++++.++.+.+|+++. -+.+.++.+ |..+|.++++.+++..+++
T Consensus 293 ~~d~ir~l~~~~sep~lit~sed~~lk~WnLqk~~~s~~~~~epi~tfra-H~gPVl~v~v~~n~~~~ys 361 (577)
T KOG0642|consen 293 HDDCIRALAFHPSEPVLITASEDGTLKLWNLQKAKKSAEKDVEPILTFRA-HEGPVLCVVVPSNGEHCYS 361 (577)
T ss_pred chhhhhhhhcCCCCCeEEEeccccchhhhhhcccCCccccceeeeEEEec-ccCceEEEEecCCceEEEe
Confidence 445566778888778899999999999999932 245777888 9999999999999887754
No 207
>PRK03629 tolB translocation protein TolB; Provisional
Probab=98.19 E-value=3.7e-05 Score=38.00 Aligned_cols=55 Identities=18% Similarity=0.106 Sum_probs=38.6
Q ss_pred eEEEEECCCCCEEEEe-cCCC--cEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 8 GLHCVFSPDCRLLATT-SADQ--TARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 8 v~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
.....|+|+|+.++.. ..++ .+++|+++++.... +.. ....+....|+|+++.|+
T Consensus 245 ~~~~~~SPDG~~La~~~~~~g~~~I~~~d~~tg~~~~-lt~-~~~~~~~~~wSPDG~~I~ 302 (429)
T PRK03629 245 NGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQ-VTD-GRSNNTEPTWFPDSQNLA 302 (429)
T ss_pred cCCeEECCCCCEEEEEEcCCCCcEEEEEECCCCCEEE-ccC-CCCCcCceEECCCCCEEE
Confidence 4457899999877644 3343 58888988766543 333 345678899999999775
No 208
>PRK01742 tolB translocation protein TolB; Provisional
Probab=98.18 E-value=2.1e-05 Score=38.77 Aligned_cols=55 Identities=22% Similarity=0.190 Sum_probs=37.3
Q ss_pred eEEEEECCCCCEEEEec-CCCcEEE--EECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 8 GLHCVFSPDCRLLATTS-ADQTARI--WNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 8 v~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
.....|+|+++.++.+. .++...+ +++..+.. ..+.. +...+....|+|+++.|+
T Consensus 250 ~~~~~wSPDG~~La~~~~~~g~~~Iy~~d~~~~~~-~~lt~-~~~~~~~~~wSpDG~~i~ 307 (429)
T PRK01742 250 NGAPAFSPDGSRLAFASSKDGVLNIYVMGANGGTP-SQLTS-GAGNNTEPSWSPDGQSIL 307 (429)
T ss_pred cCceeECCCCCEEEEEEecCCcEEEEEEECCCCCe-Eeecc-CCCCcCCEEECCCCCEEE
Confidence 34678999998776654 5665544 46555543 34444 556678899999998765
No 209
>PRK01029 tolB translocation protein TolB; Provisional
Probab=98.17 E-value=4.8e-05 Score=37.70 Aligned_cols=56 Identities=18% Similarity=0.146 Sum_probs=39.2
Q ss_pred ceEEEEECCCCCEEEEecCC---CcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 7 YGLHCVFSPDCRLLATTSAD---QTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 7 ~v~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
.+....|+|+|++++....+ ..+++|++.+++... +.. ....+....|+|+++.|+
T Consensus 328 ~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~~g~~~~-Lt~-~~~~~~~p~wSpDG~~L~ 386 (428)
T PRK01029 328 NSSCPAWSPDGKKIAFCSVIKGVRQICVYDLATGRDYQ-LTT-SPENKESPSWAIDSLHLV 386 (428)
T ss_pred CccceeECCCCCEEEEEEcCCCCcEEEEEECCCCCeEE-ccC-CCCCccceEECCCCCEEE
Confidence 45678899999987665432 368889988776543 332 234567789999998775
No 210
>PRK02889 tolB translocation protein TolB; Provisional
Probab=98.14 E-value=2.1e-05 Score=38.76 Aligned_cols=56 Identities=23% Similarity=0.312 Sum_probs=36.5
Q ss_pred ceEEEEECCCCCEEE-EecCCCcEEEEE--CCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 7 YGLHCVFSPDCRLLA-TTSADQTARIWN--TEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 7 ~v~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
......|+|+++.++ +...++...+|. ...+. ...+.. +........|+|+++.++
T Consensus 241 ~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~~-~~~lt~-~~~~~~~~~wSpDG~~l~ 299 (427)
T PRK02889 241 SNSAPAWSPDGRTLAVALSRDGNSQIYTVNADGSG-LRRLTQ-SSGIDTEPFFSPDGRSIY 299 (427)
T ss_pred CccceEECCCCCEEEEEEccCCCceEEEEECCCCC-cEECCC-CCCCCcCeEEcCCCCEEE
Confidence 345688999998775 456666655554 44443 334443 444556788999999875
No 211
>PRK04792 tolB translocation protein TolB; Provisional
Probab=98.13 E-value=4e-05 Score=38.13 Aligned_cols=56 Identities=20% Similarity=0.066 Sum_probs=37.3
Q ss_pred ceEEEEECCCCCEEEEecC-C--CcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 7 YGLHCVFSPDCRLLATTSA-D--QTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 7 ~v~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
.+....|+|++++++..+. + ..++++++.+++... +.. ........+|+|+++.++
T Consensus 219 ~~~~p~wSPDG~~La~~s~~~g~~~L~~~dl~tg~~~~-lt~-~~g~~~~~~wSPDG~~La 277 (448)
T PRK04792 219 PLMSPAWSPDGRKLAYVSFENRKAEIFVQDIYTQVREK-VTS-FPGINGAPRFSPDGKKLA 277 (448)
T ss_pred cccCceECCCCCEEEEEEecCCCcEEEEEECCCCCeEE-ecC-CCCCcCCeeECCCCCEEE
Confidence 4567899999988766543 2 357788887765432 222 233345789999999775
No 212
>KOG0270|consensus
Probab=98.12 E-value=4.5e-05 Score=37.76 Aligned_cols=58 Identities=19% Similarity=0.016 Sum_probs=40.2
Q ss_pred ccccceEEEEECCC-CCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCc
Q psy7061 3 AHRAYGLHCVFSPD-CRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSK 61 (65)
Q Consensus 3 ~~~~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 61 (65)
.|...|.++.|+|. ...+++|+.++.|.+.+.+........-. ....|-.++|+|...
T Consensus 284 ~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~~s~~~wk-~~g~VEkv~w~~~se 342 (463)
T KOG0270|consen 284 HHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDPSNSGKEWK-FDGEVEKVAWDPHSE 342 (463)
T ss_pred hcCCceeEEEecCCCceEEEeccccceEEeeeccCccccCceEE-eccceEEEEecCCCc
Confidence 47788999999994 57899999999999999984222111111 345566666666543
No 213
>KOG4328|consensus
Probab=98.10 E-value=5e-05 Score=37.83 Aligned_cols=55 Identities=18% Similarity=0.148 Sum_probs=43.6
Q ss_pred cccceEEEEECCCC--CEEEEecCCCcEEEEECC----CCceEEEeeccCCCcEeEEEEccC
Q psy7061 4 HRAYGLHCVFSPDC--RLLATTSADQTARIWNTE----DFSLVRELGTANQRWVWDAAFTLD 59 (65)
Q Consensus 4 ~~~~v~~~~~~~~~--~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~v~~~~~~~~ 59 (65)
+.+.|+++.|+|.. +.+++|...|.|-+|++. ...-+..+.. |...|.++.|+|.
T Consensus 185 ~~~Rit~l~fHPt~~~~lva~GdK~G~VG~Wn~~~~~~d~d~v~~f~~-hs~~Vs~l~F~P~ 245 (498)
T KOG4328|consen 185 TDRRITSLAFHPTENRKLVAVGDKGGQVGLWNFGTQEKDKDGVYLFTP-HSGPVSGLKFSPA 245 (498)
T ss_pred cccceEEEEecccCcceEEEEccCCCcEEEEecCCCCCccCceEEecc-CCccccceEecCC
Confidence 55789999999954 467888899999999995 2234555666 8899999999985
No 214
>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain
Probab=98.10 E-value=2.9e-05 Score=27.23 Aligned_cols=30 Identities=13% Similarity=0.198 Sum_probs=27.5
Q ss_pred cceEEEEECCCCCEEEEecCCCcEEEEECC
Q psy7061 6 AYGLHCVFSPDCRLLATTSADQTARIWNTE 35 (65)
Q Consensus 6 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 35 (65)
..|..+.|+|....++.+..++.+.++++.
T Consensus 12 ~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl~ 41 (47)
T PF12894_consen 12 SRVSCMSWCPTMDLIALGTEDGEVLVYRLN 41 (47)
T ss_pred CcEEEEEECCCCCEEEEEECCCeEEEEECC
Confidence 468899999999999999999999999984
No 215
>KOG1523|consensus
Probab=98.08 E-value=6.1e-05 Score=36.15 Aligned_cols=59 Identities=12% Similarity=0.135 Sum_probs=49.2
Q ss_pred cceEEEEECCCCCEEEEecCCCcEEEEECCCCc---eEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 6 AYGLHCVFSPDCRLLATTSADQTARIWNTEDFS---LVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 6 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
+.|++-+|++++..++.+-+...+.+|...... ...++.. |...+..+.|+|....|.+
T Consensus 11 ~pitchAwn~drt~iAv~~~~~evhiy~~~~~~~w~~~htls~-Hd~~vtgvdWap~snrIvt 72 (361)
T KOG1523|consen 11 EPITCHAWNSDRTQIAVSPNNHEVHIYSMLGADLWEPAHTLSE-HDKIVTGVDWAPKSNRIVT 72 (361)
T ss_pred CceeeeeecCCCceEEeccCCceEEEEEecCCCCceeceehhh-hCcceeEEeecCCCCceeE
Confidence 578999999999999999999999999877544 4556666 8999999999999877653
No 216
>KOG4378|consensus
Probab=98.08 E-value=8.1e-05 Score=37.77 Aligned_cols=64 Identities=14% Similarity=0.129 Sum_probs=52.8
Q ss_pred CCccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 1 l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
|++|+..|+++.|.....++++++..|.+.+....++.....+.......|.-+.|+|..+.++
T Consensus 117 lkdh~stvt~v~YN~~DeyiAsvs~gGdiiih~~~t~~~tt~f~~~sgqsvRll~ys~skr~lL 180 (673)
T KOG4378|consen 117 LKDHQSTVTYVDYNNTDEYIASVSDGGDIIIHGTKTKQKTTTFTIDSGQSVRLLRYSPSKRFLL 180 (673)
T ss_pred ccCCcceeEEEEecCCcceeEEeccCCcEEEEecccCccccceecCCCCeEEEeecccccceee
Confidence 5789999999999988899999999999999998877766666652356677888988877664
No 217
>PRK05137 tolB translocation protein TolB; Provisional
Probab=98.07 E-value=0.00013 Score=36.21 Aligned_cols=57 Identities=11% Similarity=0.090 Sum_probs=37.5
Q ss_pred cceEEEEECCCCCEEEEec-CCC--cEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 6 AYGLHCVFSPDCRLLATTS-ADQ--TARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 6 ~~v~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
.......|+|+++.++..+ .++ .++++++..+... .+.. ....+....|+|+++.|+
T Consensus 290 ~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~~g~~~~-~lt~-~~~~~~~~~~SpdG~~ia 349 (435)
T PRK05137 290 AIDTSPSYSPDGSQIVFESDRSGSPQLYVMNADGSNPR-RISF-GGGRYSTPVWSPRGDLIA 349 (435)
T ss_pred CccCceeEcCCCCEEEEEECCCCCCeEEEEECCCCCeE-Eeec-CCCcccCeEECCCCCEEE
Confidence 3455678999998776554 333 5777787655443 3333 344566788999998875
No 218
>KOG2048|consensus
Probab=98.07 E-value=0.00015 Score=37.72 Aligned_cols=57 Identities=11% Similarity=0.183 Sum_probs=48.4
Q ss_pred cceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 6 AYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 6 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
..|..++|++ +..+.+.+.++.+..||+.+.+....... ....+++++.+|.++.++
T Consensus 70 rsIE~L~W~e-~~RLFS~g~sg~i~EwDl~~lk~~~~~d~-~gg~IWsiai~p~~~~l~ 126 (691)
T KOG2048|consen 70 RSIESLAWAE-GGRLFSSGLSGSITEWDLHTLKQKYNIDS-NGGAIWSIAINPENTILA 126 (691)
T ss_pred CceeeEEEcc-CCeEEeecCCceEEEEecccCceeEEecC-CCcceeEEEeCCccceEE
Confidence 4688999995 55577888899999999999999888887 789999999999887653
No 219
>KOG1007|consensus
Probab=98.05 E-value=1.4e-05 Score=37.88 Aligned_cols=59 Identities=24% Similarity=0.367 Sum_probs=46.7
Q ss_pred ccceEEEEECC--CCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 5 RAYGLHCVFSP--DCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 5 ~~~v~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
+-..+.-.|+| +++.+++ ..++.+..||+++......+...|...|..+.|+|+-..++
T Consensus 170 ~~~ftsg~WspHHdgnqv~t-t~d~tl~~~D~RT~~~~~sI~dAHgq~vrdlDfNpnkq~~l 230 (370)
T KOG1007|consen 170 RHSFTSGAWSPHHDGNQVAT-TSDSTLQFWDLRTMKKNNSIEDAHGQRVRDLDFNPNKQHIL 230 (370)
T ss_pred cceecccccCCCCccceEEE-eCCCcEEEEEccchhhhcchhhhhcceeeeccCCCCceEEE
Confidence 34566777887 6677665 45789999999998888888777889999999999866553
No 220
>KOG0649|consensus
Probab=98.01 E-value=0.00014 Score=34.02 Aligned_cols=49 Identities=14% Similarity=0.024 Sum_probs=42.0
Q ss_pred ceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEE
Q psy7061 7 YGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAF 56 (65)
Q Consensus 7 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 56 (65)
.|.+....|..+-++.++.|+.++.|++.+++..+.+.+ |.+-++++.-
T Consensus 116 eINam~ldP~enSi~~AgGD~~~y~~dlE~G~i~r~~rG-HtDYvH~vv~ 164 (325)
T KOG0649|consen 116 EINAMWLDPSENSILFAGGDGVIYQVDLEDGRIQREYRG-HTDYVHSVVG 164 (325)
T ss_pred ccceeEeccCCCcEEEecCCeEEEEEEecCCEEEEEEcC-Ccceeeeeee
Confidence 467777888777677777899999999999999999999 8999988876
No 221
>KOG1036|consensus
Probab=97.99 E-value=8.5e-05 Score=35.38 Aligned_cols=53 Identities=23% Similarity=0.201 Sum_probs=39.5
Q ss_pred ccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccC
Q psy7061 5 RAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLD 59 (65)
Q Consensus 5 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 59 (65)
...|..+.|+|.+..++.++.|+.+++|+.........+. +..++.+++|.++
T Consensus 13 ~d~IS~v~f~~~~~~LLvssWDgslrlYdv~~~~l~~~~~--~~~plL~c~F~d~ 65 (323)
T KOG1036|consen 13 EDGISSVKFSPSSSDLLVSSWDGSLRLYDVPANSLKLKFK--HGAPLLDCAFADE 65 (323)
T ss_pred hhceeeEEEcCcCCcEEEEeccCcEEEEeccchhhhhhee--cCCceeeeeccCC
Confidence 3468899999877777778899999999988664443343 5677777777664
No 222
>KOG4497|consensus
Probab=97.98 E-value=7.9e-05 Score=36.14 Aligned_cols=57 Identities=12% Similarity=0.184 Sum_probs=45.1
Q ss_pred ceEEEEECCCCCE-EEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 7 YGLHCVFSPDCRL-LATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 7 ~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
.|..+.|..++.. ++....++.+.+|++.-.+-.-.+.. ...+....+|+|+|+.|+
T Consensus 50 ki~yieW~ads~~ilC~~yk~~~vqvwsl~Qpew~ckIde-g~agls~~~WSPdgrhiL 107 (447)
T KOG4497|consen 50 KIVYIEWKADSCHILCVAYKDPKVQVWSLVQPEWYCKIDE-GQAGLSSISWSPDGRHIL 107 (447)
T ss_pred HhhheeeeccceeeeeeeeccceEEEEEeecceeEEEecc-CCCcceeeeECCCcceEe
Confidence 4667888887765 55666788999999986666666666 788999999999998765
No 223
>KOG0322|consensus
Probab=97.98 E-value=8.7e-06 Score=38.09 Aligned_cols=34 Identities=35% Similarity=0.616 Sum_probs=30.8
Q ss_pred CCccccceEEEEECCCCCEEEEecCCCcEEEEEC
Q psy7061 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNT 34 (65)
Q Consensus 1 l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 34 (65)
|+-|...+.+++|+|+.+.++.++.|.++.+|++
T Consensus 289 LkyHsagvn~vAfspd~~lmAaaskD~rISLWkL 322 (323)
T KOG0322|consen 289 LKYHSAGVNAVAFSPDCELMAAASKDARISLWKL 322 (323)
T ss_pred hhhhhcceeEEEeCCCCchhhhccCCceEEeeec
Confidence 4558899999999999999999999999999986
No 224
>KOG2041|consensus
Probab=97.97 E-value=1.9e-05 Score=41.56 Aligned_cols=64 Identities=17% Similarity=0.219 Sum_probs=51.3
Q ss_pred CCccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEee-ccCCCcEeEEEEccCCcEEe
Q psy7061 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELG-TANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 1 l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~i~ 64 (65)
|.||.+.|..+.|....+++.++..+|.+.+|-+-.+.-..... ......|.+++|+.+|+.|.
T Consensus 67 LeGH~~sV~vvTWNe~~QKLTtSDt~GlIiVWmlykgsW~EEMiNnRnKSvV~SmsWn~dG~kIc 131 (1189)
T KOG2041|consen 67 LEGHNASVMVVTWNENNQKLTTSDTSGLIIVWMLYKGSWCEEMINNRNKSVVVSMSWNLDGTKIC 131 (1189)
T ss_pred hccCcceEEEEEeccccccccccCCCceEEEEeeecccHHHHHhhCcCccEEEEEEEcCCCcEEE
Confidence 57899999999999888899999999999999987665433322 22467889999999998774
No 225
>KOG1409|consensus
Probab=97.93 E-value=3.7e-05 Score=37.20 Aligned_cols=53 Identities=19% Similarity=0.218 Sum_probs=39.9
Q ss_pred CccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceE-EEeeccCCCcEeEEE
Q psy7061 2 AAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLV-RELGTANQRWVWDAA 55 (65)
Q Consensus 2 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~~~ 55 (65)
.+|.+.+.+..|.+....+.++..+..+.+|++-..+.+ ..+.+ |...|..++
T Consensus 194 ~~h~~~~~~l~Wd~~~~~LfSg~~d~~vi~wdigg~~g~~~el~g-h~~kV~~l~ 247 (404)
T KOG1409|consen 194 NGHTGEVTCLKWDPGQRLLFSGASDHSVIMWDIGGRKGTAYELQG-HNDKVQALS 247 (404)
T ss_pred cCcccceEEEEEcCCCcEEEeccccCceEEEeccCCcceeeeecc-chhhhhhhh
Confidence 578899999999998889999999999999998744332 23444 555555433
No 226
>PRK04922 tolB translocation protein TolB; Provisional
Probab=97.93 E-value=0.00016 Score=35.82 Aligned_cols=55 Identities=25% Similarity=0.208 Sum_probs=37.4
Q ss_pred eEEEEECCCCCEEE-EecCCC--cEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 8 GLHCVFSPDCRLLA-TTSADQ--TARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 8 v~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
.....|+|+++.++ +.+.++ .+++|++.++... .+.. +.......+|+|+++.++
T Consensus 250 ~~~~~~SpDG~~l~~~~s~~g~~~Iy~~d~~~g~~~-~lt~-~~~~~~~~~~spDG~~l~ 307 (433)
T PRK04922 250 NGAPSFSPDGRRLALTLSRDGNPEIYVMDLGSRQLT-RLTN-HFGIDTEPTWAPDGKSIY 307 (433)
T ss_pred ccCceECCCCCEEEEEEeCCCCceEEEEECCCCCeE-ECcc-CCCCccceEECCCCCEEE
Confidence 34678999998764 444444 5888898876643 3433 444456789999998775
No 227
>PRK00178 tolB translocation protein TolB; Provisional
Probab=97.88 E-value=0.00031 Score=34.71 Aligned_cols=55 Identities=18% Similarity=0.135 Sum_probs=37.0
Q ss_pred eEEEEECCCCCEEE-EecCCC--cEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 8 GLHCVFSPDCRLLA-TTSADQ--TARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 8 v~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
.....|+|+++.++ +...++ .+++++++++... .+.. +........|+|+++.++
T Consensus 245 ~~~~~~SpDG~~la~~~~~~g~~~Iy~~d~~~~~~~-~lt~-~~~~~~~~~~spDg~~i~ 302 (430)
T PRK00178 245 NGAPAWSPDGSKLAFVLSKDGNPEIYVMDLASRQLS-RVTN-HPAIDTEPFWGKDGRTLY 302 (430)
T ss_pred cCCeEECCCCCEEEEEEccCCCceEEEEECCCCCeE-Eccc-CCCCcCCeEECCCCCEEE
Confidence 44678999998765 444444 5777888876543 3333 445566788999998764
No 228
>KOG2315|consensus
Probab=97.86 E-value=0.00018 Score=36.66 Aligned_cols=55 Identities=13% Similarity=0.289 Sum_probs=41.7
Q ss_pred eEEEEECCCCCEEEEecC---CCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 8 GLHCVFSPDCRLLATTSA---DQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 8 v~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
-..+-|+|.|+.++.++- .|.+-+||..+.+.+..+.. ....-+.|+|+|.+++|
T Consensus 314 RN~~~fnp~g~ii~lAGFGNL~G~mEvwDv~n~K~i~~~~a---~~tt~~eW~PdGe~flT 371 (566)
T KOG2315|consen 314 RNTAFFNPHGNIILLAGFGNLPGDMEVWDVPNRKLIAKFKA---ANTTVFEWSPDGEYFLT 371 (566)
T ss_pred ccceEECCCCCEEEEeecCCCCCceEEEeccchhhcccccc---CCceEEEEcCCCcEEEE
Confidence 346778999997765553 57899999998777766664 34567899999999875
No 229
>KOG3914|consensus
Probab=97.85 E-value=9.6e-05 Score=36.16 Aligned_cols=60 Identities=17% Similarity=0.210 Sum_probs=47.9
Q ss_pred CccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCc
Q psy7061 2 AAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSK 61 (65)
Q Consensus 2 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 61 (65)
.||-.-++.+.++||++.++++..|..+++-.+...-.+..+--+|..-|..++.-++..
T Consensus 148 lGhvSml~dVavS~D~~~IitaDRDEkIRvs~ypa~f~IesfclGH~eFVS~isl~~~~~ 207 (390)
T KOG3914|consen 148 LGHVSMLLDVAVSPDDQFIITADRDEKIRVSRYPATFVIESFCLGHKEFVSTISLTDNYL 207 (390)
T ss_pred hhhhhhhheeeecCCCCEEEEecCCceEEEEecCcccchhhhccccHhheeeeeeccCce
Confidence 367778999999999999999999999999887766555555433888888888776654
No 230
>KOG2106|consensus
Probab=97.84 E-value=0.00072 Score=34.61 Aligned_cols=56 Identities=14% Similarity=0.267 Sum_probs=47.7
Q ss_pred cceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEE
Q psy7061 6 AYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFL 63 (65)
Q Consensus 6 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i 63 (65)
..|.++.|.+++. ++++..++.+.+|+....+..++... |..+|.+++.-.+|+.+
T Consensus 247 k~Vl~v~F~engd-viTgDS~G~i~Iw~~~~~~~~k~~~a-H~ggv~~L~~lr~Gtll 302 (626)
T KOG2106|consen 247 KFVLCVTFLENGD-VITGDSGGNILIWSKGTNRISKQVHA-HDGGVFSLCMLRDGTLL 302 (626)
T ss_pred eEEEEEEEcCCCC-EEeecCCceEEEEeCCCceEEeEeee-cCCceEEEEEecCccEe
Confidence 4688999999887 67789999999999988777777775 99999999988888765
No 231
>KOG3881|consensus
Probab=97.80 E-value=0.00026 Score=34.81 Aligned_cols=59 Identities=8% Similarity=-0.031 Sum_probs=50.2
Q ss_pred cceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEE-eeccCCCcEeEEEEccCCcEEeC
Q psy7061 6 AYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRE-LGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 6 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
..+.++...|+++.+.++...+.+..||.+.+..... +.+ -.+.+.++..+|...++++
T Consensus 248 ~~is~~~l~p~gn~Iy~gn~~g~l~~FD~r~~kl~g~~~kg-~tGsirsih~hp~~~~las 307 (412)
T KOG3881|consen 248 NPISSTGLTPSGNFIYTGNTKGQLAKFDLRGGKLLGCGLKG-ITGSIRSIHCHPTHPVLAS 307 (412)
T ss_pred CcceeeeecCCCcEEEEecccchhheecccCceeeccccCC-ccCCcceEEEcCCCceEEe
Confidence 3567777888999999999999999999999988877 555 7888999999999888764
No 232
>KOG4640|consensus
Probab=97.78 E-value=0.00033 Score=36.39 Aligned_cols=56 Identities=18% Similarity=0.096 Sum_probs=43.8
Q ss_pred ceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEe-EEEEccCCcEEe
Q psy7061 7 YGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVW-DAAFTLDSKFLL 64 (65)
Q Consensus 7 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~i~ 64 (65)
.+..+.|+|....++.+..++.+-+.+....+.. ++.. +...+. +++|.|+|+.++
T Consensus 22 ~i~~~ewnP~~dLiA~~t~~gelli~R~n~qRlw-tip~-p~~~v~~sL~W~~DGklla 78 (665)
T KOG4640|consen 22 NIKRIEWNPKMDLIATRTEKGELLIHRLNWQRLW-TIPI-PGENVTASLCWRPDGKLLA 78 (665)
T ss_pred ceEEEEEcCccchhheeccCCcEEEEEeccceeE-eccC-CCCccceeeeecCCCCEEE
Confidence 4678899999899999999999999888744443 4443 444455 999999999886
No 233
>KOG2048|consensus
Probab=97.78 E-value=0.00079 Score=35.25 Aligned_cols=58 Identities=16% Similarity=0.252 Sum_probs=46.6
Q ss_pred cceEEEEECCCCCEEEEecCCCcEEEEECCCCceEE-EeeccCCCcEeEEEEccCCcEE
Q psy7061 6 AYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVR-ELGTANQRWVWDAAFTLDSKFL 63 (65)
Q Consensus 6 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~i 63 (65)
..|.+++|+.+++.++.+..++.+.+|++....... .+.++....+-.++|++.++.+
T Consensus 26 s~I~slA~s~kS~~lAvsRt~g~IEiwN~~~~w~~~~vi~g~~drsIE~L~W~e~~RLF 84 (691)
T KOG2048|consen 26 SEIVSLAYSHKSNQLAVSRTDGNIEIWNLSNNWFLEPVIHGPEDRSIESLAWAEGGRLF 84 (691)
T ss_pred cceEEEEEeccCCceeeeccCCcEEEEccCCCceeeEEEecCCCCceeeEEEccCCeEE
Confidence 468899999999889999999999999999765543 3444456888999999877654
No 234
>KOG0280|consensus
Probab=97.78 E-value=0.00054 Score=32.82 Aligned_cols=62 Identities=13% Similarity=0.142 Sum_probs=43.8
Q ss_pred CccccceEEEEECCC-CCEEEEecCCCcEEEEECC-CCceEEE-eeccCCCcEeEEEEccC-CcEEe
Q psy7061 2 AAHRAYGLHCVFSPD-CRLLATTSADQTARIWNTE-DFSLVRE-LGTANQRWVWDAAFTLD-SKFLL 64 (65)
Q Consensus 2 ~~~~~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~v~~~~~~~~-~~~i~ 64 (65)
+.|......+.|+.. .+.+.+|+.|+.+..||++ .++.+.. ... |..+|.++.-+|. ..+|+
T Consensus 162 k~He~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~~~i~~n~kv-H~~GV~SI~ss~~~~~~I~ 227 (339)
T KOG0280|consen 162 KVHEFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPKTFIWHNSKV-HTSGVVSIYSSPPKPTYIA 227 (339)
T ss_pred cccceeeeeeecccCCCceEEecCCCceEEEEEecCCcceeeeccee-eecceEEEecCCCCCceEE
Confidence 457777777888763 4688999999999999999 3333333 233 7788888887764 55554
No 235
>KOG4547|consensus
Probab=97.73 E-value=0.00064 Score=34.83 Aligned_cols=60 Identities=15% Similarity=0.082 Sum_probs=51.5
Q ss_pred cccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 4 HRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 4 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
|-+.|..+.++.+-..+-+++.+..+..|+......+..... ....+.+++.+|++..++
T Consensus 101 h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~~~~~~~~~-~~~~~~sl~is~D~~~l~ 160 (541)
T KOG4547|consen 101 HYGNVNEILDAQRLGCIYSVGADLKVVYILEKEKVIIRIWKE-QKPLVSSLCISPDGKILL 160 (541)
T ss_pred CCCcceeeecccccCceEecCCceeEEEEecccceeeeeecc-CCCccceEEEcCCCCEEE
Confidence 566777777777777888999999999999999999988888 788899999999988775
No 236
>PRK04792 tolB translocation protein TolB; Provisional
Probab=97.72 E-value=0.0007 Score=33.95 Aligned_cols=54 Identities=22% Similarity=0.209 Sum_probs=36.3
Q ss_pred EEEEECCCCCEEEE-ecCCCc--EEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 9 LHCVFSPDCRLLAT-TSADQT--ARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 9 ~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
....|+|+++.++. ...++. ++++++.++... .+.. +.......+|+|+++.++
T Consensus 265 ~~~~wSPDG~~La~~~~~~g~~~Iy~~dl~tg~~~-~lt~-~~~~~~~p~wSpDG~~I~ 321 (448)
T PRK04792 265 GAPRFSPDGKKLALVLSKDGQPEIYVVDIATKALT-RITR-HRAIDTEPSWHPDGKSLI 321 (448)
T ss_pred CCeeECCCCCEEEEEEeCCCCeEEEEEECCCCCeE-ECcc-CCCCccceEECCCCCEEE
Confidence 45789999987654 444554 677777766543 3333 444567789999998775
No 237
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=97.70 E-value=0.0011 Score=32.60 Aligned_cols=55 Identities=15% Similarity=0.179 Sum_probs=35.9
Q ss_pred eEEEEECCCCCEEEEecC-CC--cEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 8 GLHCVFSPDCRLLATTSA-DQ--TARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 8 v~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
.....|+|+++.++..+. .+ .++++++..+... .+.. .........|+|++++++
T Consensus 280 ~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~~~~~~-~l~~-~~~~~~~~~~spdg~~i~ 337 (417)
T TIGR02800 280 DTEPSWSPDGKSIAFTSDRGGSPQIYMMDADGGEVR-RLTF-RGGYNASPSWSPDGDLIA 337 (417)
T ss_pred CCCEEECCCCCEEEEEECCCCCceEEEEECCCCCEE-Eeec-CCCCccCeEECCCCCEEE
Confidence 345688999987765443 33 5777777765543 3333 345567788999998775
No 238
>PRK01029 tolB translocation protein TolB; Provisional
Probab=97.69 E-value=0.00064 Score=33.93 Aligned_cols=56 Identities=9% Similarity=-0.122 Sum_probs=35.4
Q ss_pred ceEEEEECCCCCE--E-EEecCCC--cEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 7 YGLHCVFSPDCRL--L-ATTSADQ--TARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 7 ~v~~~~~~~~~~~--~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
......|+|+|+. + ..+..++ .+++.++..+... .+.. ........+|+|+|+.|+
T Consensus 186 ~~~sP~wSPDG~~~~~~y~S~~~g~~~I~~~~l~~g~~~-~lt~-~~g~~~~p~wSPDG~~La 246 (428)
T PRK01029 186 LSITPTWMHIGSGFPYLYVSYKLGVPKIFLGSLENPAGK-KILA-LQGNQLMPTFSPRKKLLA 246 (428)
T ss_pred CcccceEccCCCceEEEEEEccCCCceEEEEECCCCCce-Eeec-CCCCccceEECCCCCEEE
Confidence 4556789999864 2 2344443 4666677766543 3332 344556789999998875
No 239
>KOG0650|consensus
Probab=97.63 E-value=7.9e-05 Score=38.44 Aligned_cols=58 Identities=14% Similarity=0.091 Sum_probs=45.1
Q ss_pred cceEEEEECCCCCEEEEecCCCcEEEEECCC-CceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 6 AYGLHCVFSPDCRLLATTSADQTARIWNTED-FSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 6 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
..|..++.+|.|..++.++.++.+..||++- .+...++.. |...+..++|++....++
T Consensus 608 kwiS~msihp~GDnli~gs~d~k~~WfDldlsskPyk~lr~-H~~avr~Va~H~ryPLfa 666 (733)
T KOG0650|consen 608 KWISSMSIHPNGDNLILGSYDKKMCWFDLDLSSKPYKTLRL-HEKAVRSVAFHKRYPLFA 666 (733)
T ss_pred eeeeeeeecCCCCeEEEecCCCeeEEEEcccCcchhHHhhh-hhhhhhhhhhccccceee
Confidence 4577889999998898999999999999984 455555666 788888888887655544
No 240
>KOG1334|consensus
Probab=97.62 E-value=6e-05 Score=37.92 Aligned_cols=57 Identities=16% Similarity=0.153 Sum_probs=42.1
Q ss_pred Ccccc--ceEEEE-ECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccC
Q psy7061 2 AAHRA--YGLHCV-FSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLD 59 (65)
Q Consensus 2 ~~~~~--~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 59 (65)
++|.+ .|..+- |.|..+++++|+..|.+.+|+-.+++.++.+.+ .+.-|+|+.=+|-
T Consensus 388 KGHrN~~TVKgVNFfGPrsEyVvSGSDCGhIFiW~K~t~eii~~Meg-Dr~VVNCLEpHP~ 447 (559)
T KOG1334|consen 388 KGHRNSRTVKGVNFFGPRSEYVVSGSDCGHIFIWDKKTGEIIRFMEG-DRHVVNCLEPHPH 447 (559)
T ss_pred cccccccccceeeeccCccceEEecCccceEEEEecchhHHHHHhhc-ccceEeccCCCCC
Confidence 56665 466665 477889999999999999999888887776666 4446666555554
No 241
>KOG4640|consensus
Probab=97.61 E-value=0.00056 Score=35.62 Aligned_cols=53 Identities=17% Similarity=0.117 Sum_probs=40.5
Q ss_pred cceE-EEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEcc
Q psy7061 6 AYGL-HCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTL 58 (65)
Q Consensus 6 ~~v~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 58 (65)
..+. +++|.|+|+.++.+-.||.+++.|...+..+..........+.++-|.+
T Consensus 62 ~~v~~sL~W~~DGkllaVg~kdG~I~L~Dve~~~~l~~~~~s~e~~is~~~w~~ 115 (665)
T KOG4640|consen 62 ENVTASLCWRPDGKLLAVGFKDGTIRLHDVEKGGRLVSFLFSVETDISKGIWDR 115 (665)
T ss_pred CccceeeeecCCCCEEEEEecCCeEEEEEccCCCceeccccccccchheeeccc
Confidence 3444 8999999999999999999999999988777663322456666666653
No 242
>KOG1334|consensus
Probab=97.60 E-value=0.00012 Score=36.96 Aligned_cols=59 Identities=19% Similarity=0.187 Sum_probs=47.7
Q ss_pred CCccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccC
Q psy7061 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLD 59 (65)
Q Consensus 1 l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 59 (65)
|.+|.+-|..+.|...|..+++++.+..+.+|+-..+.....+...|...|....|-|.
T Consensus 138 L~~H~GcVntV~FN~~Gd~l~SgSDD~~vv~WdW~~~~~~l~f~SGH~~NvfQaKFiP~ 196 (559)
T KOG1334|consen 138 LNKHKGCVNTVHFNQRGDVLASGSDDLQVVVWDWVSGSPKLSFESGHCNNVFQAKFIPF 196 (559)
T ss_pred ccCCCCccceeeecccCceeeccCccceEEeehhhccCcccccccccccchhhhhccCC
Confidence 46788999999999999999999999999999988776666665557777766666553
No 243
>KOG3881|consensus
Probab=97.60 E-value=0.001 Score=32.87 Aligned_cols=58 Identities=16% Similarity=0.163 Sum_probs=46.6
Q ss_pred ceEEEEECCC--CCEEEEecCCCcEEEEECCCC-ceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 7 YGLHCVFSPD--CRLLATTSADQTARIWNTEDF-SLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 7 ~v~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
.++.+.|-++ ...++++..-+.+++||.+.+ +++.++.. ....+.++...|.+++|++
T Consensus 204 W~tdi~Fl~g~~~~~fat~T~~hqvR~YDt~~qRRPV~~fd~-~E~~is~~~l~p~gn~Iy~ 264 (412)
T KOG3881|consen 204 WITDIRFLEGSPNYKFATITRYHQVRLYDTRHQRRPVAQFDF-LENPISSTGLTPSGNFIYT 264 (412)
T ss_pred eeccceecCCCCCceEEEEecceeEEEecCcccCcceeEecc-ccCcceeeeecCCCcEEEE
Confidence 4567788876 678999999999999999965 45556666 6788999999999988763
No 244
>KOG2321|consensus
Probab=97.59 E-value=0.0012 Score=34.32 Aligned_cols=53 Identities=8% Similarity=-0.063 Sum_probs=41.5
Q ss_pred ceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccC
Q psy7061 7 YGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLD 59 (65)
Q Consensus 7 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 59 (65)
.|+++.|..+|-.++.|...|.+.+||++...++..-......++..+.|.+.
T Consensus 230 svTal~F~d~gL~~aVGts~G~v~iyDLRa~~pl~~kdh~~e~pi~~l~~~~~ 282 (703)
T KOG2321|consen 230 SVTALKFRDDGLHVAVGTSTGSVLIYDLRASKPLLVKDHGYELPIKKLDWQDT 282 (703)
T ss_pred cceEEEecCCceeEEeeccCCcEEEEEcccCCceeecccCCccceeeeccccc
Confidence 48999999889899999999999999999777654433225567777777654
No 245
>KOG1240|consensus
Probab=97.58 E-value=0.0016 Score=36.54 Aligned_cols=62 Identities=15% Similarity=0.205 Sum_probs=40.4
Q ss_pred CccccceEEEEECCC-CCEEEEecCCCcEEEEECCCC-------ceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 2 AAHRAYGLHCVFSPD-CRLLATTSADQTARIWNTEDF-------SLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 2 ~~~~~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
..|...+..++.+++ +..+++++.||.|++|+.+.. +...++.. .+..+..+...+.+..++
T Consensus 1045 ~Ehs~~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~-~~sr~~~vt~~~~~~~~A 1114 (1431)
T KOG1240|consen 1045 HEHSSAVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSP-EGSRVEKVTMCGNGDQFA 1114 (1431)
T ss_pred hhccccccceeecCCCCceEEEecCCceEEEeeehhhhcCcceeeeeEEEec-cCCceEEEEeccCCCeEE
Confidence 456777777777664 589999999999999998731 11222222 345666666666665543
No 246
>KOG2079|consensus
Probab=97.55 E-value=0.0018 Score=35.85 Aligned_cols=41 Identities=15% Similarity=0.296 Sum_probs=35.8
Q ss_pred ccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeec
Q psy7061 5 RAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGT 45 (65)
Q Consensus 5 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 45 (65)
++.|.+++|+.+|..++.|-.+|.|.+||...++.+..+..
T Consensus 130 ~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k~l~~i~e 170 (1206)
T KOG2079|consen 130 QGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAKILKVITE 170 (1206)
T ss_pred CCcceeeEecCCCceeccccCCCcEEEEEccCCcceeeeee
Confidence 45799999999999999999999999999998877766654
No 247
>KOG3914|consensus
Probab=97.55 E-value=0.00018 Score=35.31 Aligned_cols=42 Identities=21% Similarity=0.386 Sum_probs=33.7
Q ss_pred CccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEee
Q psy7061 2 AAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELG 44 (65)
Q Consensus 2 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 44 (65)
-||+..|..++..++ ..+++++.|+.+++|++.+++.+.++.
T Consensus 191 lGH~eFVS~isl~~~-~~LlS~sGD~tlr~Wd~~sgk~L~t~d 232 (390)
T KOG3914|consen 191 LGHKEFVSTISLTDN-YLLLSGSGDKTLRLWDITSGKLLDTCD 232 (390)
T ss_pred cccHhheeeeeeccC-ceeeecCCCCcEEEEecccCCcccccc
Confidence 368888888887764 558999999999999999888665443
No 248
>KOG1188|consensus
Probab=97.54 E-value=0.00095 Score=32.55 Aligned_cols=62 Identities=11% Similarity=0.086 Sum_probs=38.0
Q ss_pred CccccceEEEEECC--CCCEEEEecCCCcEEEEECCCCceEEEeec-cCC-CcEeEEEEccCCcEE
Q psy7061 2 AAHRAYGLHCVFSP--DCRLLATTSADQTARIWNTEDFSLVRELGT-ANQ-RWVWDAAFTLDSKFL 63 (65)
Q Consensus 2 ~~~~~~v~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~v~~~~~~~~~~~i 63 (65)
+++...+..+.|.. ....+.+++.||.|++||++.......+.. ++. ....+++.+-.+..+
T Consensus 67 k~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~~~~~~~~~f~~ld~nck~~ii 132 (376)
T KOG1188|consen 67 KGPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESARISWTQQSGTPFICLDLNCKKNII 132 (376)
T ss_pred cCCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhhhheeccCCCCCcceEeeccCcCCeE
Confidence 34555566677755 346788999999999999997654444433 122 345555554344443
No 249
>KOG1587|consensus
Probab=97.52 E-value=0.0016 Score=33.79 Aligned_cols=55 Identities=18% Similarity=0.154 Sum_probs=40.1
Q ss_pred cceEEEEECC-CCCEEEEecCCCcEEEEECCCCce--EE---EeeccCCCcEeEEEEccCC
Q psy7061 6 AYGLHCVFSP-DCRLLATTSADQTARIWNTEDFSL--VR---ELGTANQRWVWDAAFTLDS 60 (65)
Q Consensus 6 ~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~~---~~~~~~~~~v~~~~~~~~~ 60 (65)
..+.++.|+| +...++.|..+|.|.+|+++.+.. .. .....|...+..+.|..+.
T Consensus 243 s~v~~~~f~p~~p~ll~gG~y~GqV~lWD~~~~~~~~~s~ls~~~~sh~~~v~~vvW~~~~ 303 (555)
T KOG1587|consen 243 SEVTCLKFCPFDPNLLAGGCYNGQVVLWDLRKGSDTPPSGLSALEVSHSEPVTAVVWLQNE 303 (555)
T ss_pred CceeEEEeccCCcceEEeeccCceEEEEEccCCCCCCCcccccccccCCcCeEEEEEeccC
Confidence 4688999999 457788888999999999985543 11 1112378888888886643
No 250
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=97.52 E-value=0.0012 Score=31.65 Aligned_cols=53 Identities=13% Similarity=0.169 Sum_probs=35.2
Q ss_pred EEEECCCCCEEEEec-CCCcEEEEECCCCc-e---EEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 10 HCVFSPDCRLLATTS-ADQTARIWNTEDFS-L---VRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 10 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~---~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
.+.++|+++++.++. .++.+.+|+++... . +..... ......++++|++++++
T Consensus 232 ~i~~~pdg~~lyv~~~~~~~I~v~~i~~~~~~~~~~~~~~~--~~~p~~~~~~~dg~~l~ 289 (330)
T PRK11028 232 DIHITPDGRHLYACDRTASLISVFSVSEDGSVLSFEGHQPT--ETQPRGFNIDHSGKYLI 289 (330)
T ss_pred eEEECCCCCEEEEecCCCCeEEEEEEeCCCCeEEEeEEEec--cccCCceEECCCCCEEE
Confidence 477899998877664 46789999886432 1 222221 23456788999998886
No 251
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=97.49 E-value=0.0021 Score=32.99 Aligned_cols=57 Identities=12% Similarity=0.274 Sum_probs=42.8
Q ss_pred cceEEEEECCCCCEEEEecCCC----cEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 6 AYGLHCVFSPDCRLLATTSADQ----TARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 6 ~~v~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
+-|+...|+|++++++.+-.++ .++++++..++...... ....-.+.+|.|+++++.
T Consensus 444 ~lItdf~~~~nsr~iAYafP~gy~tq~Iklydm~~~Kiy~vTT--~ta~DfsPaFD~d~ryLY 504 (668)
T COG4946 444 GLITDFDWHPNSRWIAYAFPEGYYTQSIKLYDMDGGKIYDVTT--PTAYDFSPAFDPDGRYLY 504 (668)
T ss_pred ceeEEEEEcCCceeEEEecCcceeeeeEEEEecCCCeEEEecC--CcccccCcccCCCCcEEE
Confidence 4688999999999999888765 47889988777654433 344456778888888763
No 252
>COG2319 FOG: WD40 repeat [General function prediction only]
Probab=97.48 E-value=0.0022 Score=30.45 Aligned_cols=60 Identities=37% Similarity=0.501 Sum_probs=44.0
Q ss_pred ccccceEEEEECCCCCEEEEecCCCcEEEEECCCCce-EEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 3 AHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSL-VRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 3 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
+|.... ...|++++..+++++.++.+++|+...... ...... |...+..+.|+|++..++
T Consensus 240 ~~~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~ 300 (466)
T COG2319 240 GHSDSV-VSSFSPDGSLLASGSSDGTIRLWDLRSSSSLLRTLSG-HSSSVLSVAFSPDGKLLA 300 (466)
T ss_pred CCCcce-eEeECCCCCEEEEecCCCcEEEeeecCCCcEEEEEec-CCccEEEEEECCCCCEEE
Confidence 344443 337889887788899999999999986554 444444 788999999999766654
No 253
>PRK04043 tolB translocation protein TolB; Provisional
Probab=97.48 E-value=0.0029 Score=31.71 Aligned_cols=55 Identities=16% Similarity=0.145 Sum_probs=34.6
Q ss_pred eEEEEECCCCCEEE-EecCC--CcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 8 GLHCVFSPDCRLLA-TTSAD--QTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 8 v~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
.....|+|+++.++ +...+ ..++++++..+... .+.. .........|+|+|+.|+
T Consensus 235 ~~~~~~SPDG~~la~~~~~~g~~~Iy~~dl~~g~~~-~LT~-~~~~d~~p~~SPDG~~I~ 292 (419)
T PRK04043 235 LVVSDVSKDGSKLLLTMAPKGQPDIYLYDTNTKTLT-QITN-YPGIDVNGNFVEDDKRIV 292 (419)
T ss_pred EEeeEECCCCCEEEEEEccCCCcEEEEEECCCCcEE-Eccc-CCCccCccEECCCCCEEE
Confidence 44578999997654 33333 45777787766543 3333 333345678999998764
No 254
>KOG4227|consensus
Probab=97.46 E-value=0.0021 Score=32.25 Aligned_cols=61 Identities=16% Similarity=0.084 Sum_probs=48.3
Q ss_pred cccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeec-cCCCcEeEEEEccCCcEEe
Q psy7061 4 HRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGT-ANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 4 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~i~ 64 (65)
|...|.++.|.....++.++..++.|.+.++.+...+..+.. ..++.|..+.-+|....++
T Consensus 104 H~SNIF~L~F~~~N~~~~SG~~~~~VI~HDiEt~qsi~V~~~~~~~~~VY~m~~~P~DN~~~ 165 (609)
T KOG4227|consen 104 HRSNIFSLEFDLENRFLYSGERWGTVIKHDIETKQSIYVANENNNRGDVYHMDQHPTDNTLI 165 (609)
T ss_pred cccceEEEEEccCCeeEecCCCcceeEeeecccceeeeeecccCcccceeecccCCCCceEE
Confidence 667899999998888999999999999999998887776653 1345788888888755544
No 255
>PRK04043 tolB translocation protein TolB; Provisional
Probab=97.43 E-value=0.0034 Score=31.46 Aligned_cols=56 Identities=14% Similarity=0.009 Sum_probs=37.6
Q ss_pred ceEEEEECCCCCE-EEEecC---CCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 7 YGLHCVFSPDCRL-LATTSA---DQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 7 ~v~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
......|+|+++. ++..+. +..++++++.+++..... . .........|+|+++.++
T Consensus 189 ~~~~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg~~~~lt-~-~~g~~~~~~~SPDG~~la 248 (419)
T PRK04043 189 LNIFPKWANKEQTAFYYTSYGERKPTLYKYNLYTGKKEKIA-S-SQGMLVVSDVSKDGSKLL 248 (419)
T ss_pred CeEeEEECCCCCcEEEEEEccCCCCEEEEEECCCCcEEEEe-c-CCCcEEeeEECCCCCEEE
Confidence 4567899999974 543332 345888888776654333 3 355566788999998775
No 256
>KOG4532|consensus
Probab=97.39 E-value=0.003 Score=30.26 Aligned_cols=54 Identities=17% Similarity=0.158 Sum_probs=39.3
Q ss_pred ceEEEEECCCCCEEEEecCCCcEEEEECCCCceE----EEeeccCCCcEeEEEEccCC
Q psy7061 7 YGLHCVFSPDCRLLATTSADQTARIWNTEDFSLV----RELGTANQRWVWDAAFTLDS 60 (65)
Q Consensus 7 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~v~~~~~~~~~ 60 (65)
.-.+..|+.....++.+..|+.+.+||++..... .....+|.+.+..+.|++-+
T Consensus 205 ~gF~~S~s~~~~~FAv~~Qdg~~~I~DVR~~~tpm~~~sstrp~hnGa~R~c~Fsl~g 262 (344)
T KOG4532|consen 205 HGFYNSFSENDLQFAVVFQDGTCAIYDVRNMATPMAEISSTRPHHNGAFRVCRFSLYG 262 (344)
T ss_pred CceeeeeccCcceEEEEecCCcEEEEEecccccchhhhcccCCCCCCceEEEEecCCC
Confidence 3456778877788999999999999999854322 12222478889999998744
No 257
>KOG1587|consensus
Probab=97.36 E-value=0.0013 Score=34.11 Aligned_cols=59 Identities=20% Similarity=0.170 Sum_probs=45.1
Q ss_pred ccccceEEEEECCCCCEEEEecCCCcEEEEECC-CCceEEEeeccCCCcEeEEEEccCCcE
Q psy7061 3 AHRAYGLHCVFSPDCRLLATTSADQTARIWNTE-DFSLVRELGTANQRWVWDAAFTLDSKF 62 (65)
Q Consensus 3 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~ 62 (65)
.|.+.|..+.++|=+..++....|-.+++|... ...++..+.. +...+.+++|||.-.-
T Consensus 396 ~h~g~v~~v~~nPF~~k~fls~gDW~vriWs~~~~~~Pl~~~~~-~~~~v~~vaWSptrpa 455 (555)
T KOG1587|consen 396 THIGPVYAVSRNPFYPKNFLSVGDWTVRIWSEDVIASPLLSLDS-SPDYVTDVAWSPTRPA 455 (555)
T ss_pred ccCcceEeeecCCCccceeeeeccceeEeccccCCCCcchhhhh-ccceeeeeEEcCcCce
Confidence 367789999999977655555559999999987 6666666666 6677999999997543
No 258
>KOG2111|consensus
Probab=97.36 E-value=0.0011 Score=32.06 Aligned_cols=31 Identities=32% Similarity=0.372 Sum_probs=28.5
Q ss_pred cceEEEEECCCCCEEEEecCCCcEEEEECCC
Q psy7061 6 AYGLHCVFSPDCRLLATTSADQTARIWNTED 36 (65)
Q Consensus 6 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 36 (65)
..++++.|+|++.+++.++..+.+.+|.++.
T Consensus 227 A~iy~iaFSp~~s~LavsSdKgTlHiF~l~~ 257 (346)
T KOG2111|consen 227 ADIYCIAFSPNSSWLAVSSDKGTLHIFSLRD 257 (346)
T ss_pred heEEEEEeCCCccEEEEEcCCCeEEEEEeec
Confidence 4799999999999999999999999998874
No 259
>KOG2314|consensus
Probab=97.35 E-value=0.0013 Score=34.18 Aligned_cols=57 Identities=11% Similarity=0.210 Sum_probs=40.1
Q ss_pred eEEEEECCCCCEEEEecC---CCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 8 GLHCVFSPDCRLLATTSA---DQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 8 v~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
...+.|+|.|++++.++. .+.+.++|.+.......-.. .......+.|.|.|+++.|
T Consensus 495 ~N~vfwsPkG~fvvva~l~s~~g~l~F~D~~~a~~k~~~~~-eh~~at~veWDPtGRYvvT 554 (698)
T KOG2314|consen 495 ANTVFWSPKGRFVVVAALVSRRGDLEFYDTDYADLKDTASP-EHFAATEVEWDPTGRYVVT 554 (698)
T ss_pred cceEEEcCCCcEEEEEEecccccceEEEecchhhhhhccCc-cccccccceECCCCCEEEE
Confidence 456889999998766543 57789998874333322222 3456788999999999874
No 260
>KOG4190|consensus
Probab=97.34 E-value=0.00027 Score=36.64 Aligned_cols=62 Identities=13% Similarity=0.160 Sum_probs=42.8
Q ss_pred CccccceEEEEECCCCCEEEEecCCCcEEEEECCC-Cc------eEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 2 AAHRAYGLHCVFSPDCRLLATTSADQTARIWNTED-FS------LVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 2 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~------~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
.+|+++|..+.--.+.+-+++++.|..|++|.++. +. +..++.. |...++++.|-.+-++++
T Consensus 732 ~GH~~~iRai~AidNENSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~a-Hkk~i~~igfL~~lr~i~ 800 (1034)
T KOG4190|consen 732 TGHQEKIRAIAAIDNENSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQA-HKKPIHDIGFLADLRSIA 800 (1034)
T ss_pred cCcHHHhHHHHhcccccceeeccCCceEEEEEeccccCccccceeeeEhhh-ccCcccceeeeeccceee
Confidence 46777766655444566788999999999999873 22 3334445 788888887766665554
No 261
>KOG0280|consensus
Probab=97.29 E-value=0.0027 Score=30.63 Aligned_cols=54 Identities=20% Similarity=0.138 Sum_probs=41.2
Q ss_pred cccceEEEEECC-CCCEEEEecCCCcEEEEECC-CCceEEEeeccCCCcEeEEEEccC
Q psy7061 4 HRAYGLHCVFSP-DCRLLATTSADQTARIWNTE-DFSLVRELGTANQRWVWDAAFTLD 59 (65)
Q Consensus 4 ~~~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~~~~~~~~ 59 (65)
|...|.++.=+| .+..+++|+.|..+++||.+ .++++..-. -.++|+.+.++|.
T Consensus 209 H~~GV~SI~ss~~~~~~I~TGsYDe~i~~~DtRnm~kPl~~~~--v~GGVWRi~~~p~ 264 (339)
T KOG0280|consen 209 HTSGVVSIYSSPPKPTYIATGSYDECIRVLDTRNMGKPLFKAK--VGGGVWRIKHHPE 264 (339)
T ss_pred eecceEEEecCCCCCceEEEeccccceeeeehhcccCccccCc--cccceEEEEecch
Confidence 666777777666 45689999999999999998 455554433 4588999998885
No 262
>KOG4714|consensus
Probab=97.28 E-value=0.00012 Score=34.51 Aligned_cols=52 Identities=15% Similarity=0.326 Sum_probs=38.7
Q ss_pred eEEEEECCCC-CEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccC
Q psy7061 8 GLHCVFSPDC-RLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLD 59 (65)
Q Consensus 8 v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 59 (65)
+.+++-+|.. +.++.++.++.+.+|+.+.......+...|+..++.+.|+|.
T Consensus 182 v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~~p~S~l~ahk~~i~eV~FHpk 234 (319)
T KOG4714|consen 182 VTALCSHPAQQHLVCCGTDDGIVGLWDARNVAMPVSLLKAHKAEIWEVHFHPK 234 (319)
T ss_pred chhhhCCcccccEEEEecCCCeEEEEEcccccchHHHHHHhhhhhhheeccCC
Confidence 6667777854 567888899999999998765444443347888888888874
No 263
>KOG3621|consensus
Probab=97.27 E-value=0.00097 Score=35.16 Aligned_cols=59 Identities=10% Similarity=-0.011 Sum_probs=42.3
Q ss_pred ceEEEEECCCCCEEEEecCCCcEEEEECCCCceEE----E-eeccCCCcEeEEEEccCCcEEeC
Q psy7061 7 YGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVR----E-LGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 7 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
.+.....++...+++.++..+.|.++.+....... . ....|...|++++|+++++.+++
T Consensus 78 ~~~~~~vs~~e~lvAagt~~g~V~v~ql~~~~p~~~~~~t~~d~~~~~rVTal~Ws~~~~k~ys 141 (726)
T KOG3621|consen 78 ITCVRSVSSVEYLVAAGTASGRVSVFQLNKELPRDLDYVTPCDKSHKCRVTALEWSKNGMKLYS 141 (726)
T ss_pred eEEEEEecchhHhhhhhcCCceEEeehhhccCCCcceeeccccccCCceEEEEEecccccEEee
Confidence 45556677777888888899999999876532211 1 11136899999999999998764
No 264
>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal
Probab=97.25 E-value=0.0023 Score=30.44 Aligned_cols=40 Identities=23% Similarity=0.325 Sum_probs=34.0
Q ss_pred ccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEee
Q psy7061 5 RAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELG 44 (65)
Q Consensus 5 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 44 (65)
...|..+..+|++..+++...+|.+.+|++.+-+......
T Consensus 229 ~d~i~kmSlSPdg~~La~ih~sG~lsLW~iPsL~~~~~W~ 268 (282)
T PF15492_consen 229 QDGIFKMSLSPDGSLLACIHFSGSLSLWEIPSLRLQRSWK 268 (282)
T ss_pred CCceEEEEECCCCCEEEEEEcCCeEEEEecCcchhhcccc
Confidence 3468899999999999999999999999998776665554
No 265
>KOG1832|consensus
Probab=97.23 E-value=0.0027 Score=35.05 Aligned_cols=60 Identities=20% Similarity=0.089 Sum_probs=47.6
Q ss_pred ccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEE
Q psy7061 3 AHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFL 63 (65)
Q Consensus 3 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i 63 (65)
.|....+++.|+-+.+.++.|...|.+++++..+|........ |...+..+.=+.+|..+
T Consensus 1099 d~~~~fTc~afs~~~~hL~vG~~~Geik~~nv~sG~~e~s~nc-H~SavT~vePs~dgs~~ 1158 (1516)
T KOG1832|consen 1099 DETALFTCIAFSGGTNHLAVGSHAGEIKIFNVSSGSMEESVNC-HQSAVTLVEPSVDGSTQ 1158 (1516)
T ss_pred ccccceeeEEeecCCceEEeeeccceEEEEEccCccccccccc-cccccccccccCCccee
Confidence 4566788999999889999999999999999999887777777 77777666555555544
No 266
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=97.22 E-value=0.0097 Score=32.87 Aligned_cols=57 Identities=12% Similarity=0.177 Sum_probs=41.5
Q ss_pred cceEEEEECCCCCEEEEecCCCcEEEE----ECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 6 AYGLHCVFSPDCRLLATTSADQTARIW----NTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 6 ~~v~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
..|..+.|.++...++.+..+|.+.+. +... ..+..... -..++.+++||||+..++
T Consensus 76 ~~ivs~~yl~d~~~l~~~~~~Gdi~~~~~~~~~~~-~~~E~VG~-vd~GI~a~~WSPD~Ella 136 (928)
T PF04762_consen 76 DKIVSFQYLADSESLCIALASGDIILVREDPDPDE-DEIEIVGS-VDSGILAASWSPDEELLA 136 (928)
T ss_pred CcEEEEEeccCCCcEEEEECCceEEEEEccCCCCC-ceeEEEEE-EcCcEEEEEECCCcCEEE
Confidence 468889999988888888888888888 3332 22222222 467899999999998775
No 267
>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins. Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].
Probab=97.21 E-value=0.0045 Score=33.52 Aligned_cols=46 Identities=17% Similarity=0.150 Sum_probs=35.2
Q ss_pred CEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 18 RLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
-.++.|+.+|.+++|+-...+.-..+.+ -..+|..+..+.+|++|+
T Consensus 589 G~iavgs~~G~IRLyd~~g~~AKT~lp~-lG~pI~~iDvt~DGkwil 634 (794)
T PF08553_consen 589 GYIAVGSNKGDIRLYDRLGKRAKTALPG-LGDPIIGIDVTADGKWIL 634 (794)
T ss_pred ceEEEEeCCCcEEeecccchhhhhcCCC-CCCCeeEEEecCCCcEEE
Confidence 3588899999999998543333333444 678999999999999986
No 268
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=97.17 E-value=0.0066 Score=29.43 Aligned_cols=53 Identities=25% Similarity=0.342 Sum_probs=41.2
Q ss_pred EEECCCCCEEEEecC-----CCcEEEEECC-CCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 11 CVFSPDCRLLATTSA-----DQTARIWNTE-DFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 11 ~~~~~~~~~~~~~~~-----~~~~~~~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
..|+++|+++.+.-+ .+.+-+|+.. ....+..+.. +.-.-+.+.+.|+++.++
T Consensus 56 g~fs~dG~~LytTEnd~~~g~G~IgVyd~~~~~~ri~E~~s-~GIGPHel~l~pDG~tLv 114 (305)
T PF07433_consen 56 GVFSPDGRLLYTTENDYETGRGVIGVYDAARGYRRIGEFPS-HGIGPHELLLMPDGETLV 114 (305)
T ss_pred EEEcCCCCEEEEeccccCCCcEEEEEEECcCCcEEEeEecC-CCcChhhEEEcCCCCEEE
Confidence 578999998877654 3568899998 6677777777 777788999999996554
No 269
>KOG1310|consensus
Probab=97.17 E-value=0.0032 Score=32.87 Aligned_cols=56 Identities=16% Similarity=0.019 Sum_probs=45.3
Q ss_pred eEEEEECC-CCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 8 GLHCVFSP-DCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 8 v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
|..+.|-- .++.+++|+.|+...+|+-.++.....+.+ ....+.++.-+|....++
T Consensus 626 IKeanFlGqrgeyiasgSddgr~fiwek~tg~i~av~~g-dssivnciqghP~~~~la 682 (758)
T KOG1310|consen 626 IKEANFLGQRGEYIASGSDDGRFFIWEKLTGSILAVIHG-DSSIVNCIQGHPRCPTLA 682 (758)
T ss_pred cccccccccCCCeeeEecCCCceEEeecCCcceEEEeeC-chhheeeccCCCCCceee
Confidence 44555533 578999999999999999999999888888 778888888888775554
No 270
>KOG1240|consensus
Probab=97.17 E-value=0.0063 Score=34.48 Aligned_cols=56 Identities=9% Similarity=0.090 Sum_probs=45.1
Q ss_pred cccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccC
Q psy7061 4 HRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLD 59 (65)
Q Consensus 4 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 59 (65)
..+.|+++..+|.++|++.|...|.+-+||++=+..+.....++...+..+..+|.
T Consensus 1194 ~hG~vTSi~idp~~~WlviGts~G~l~lWDLRF~~~i~sw~~P~~~~i~~v~~~~~ 1249 (1431)
T KOG1240|consen 1194 RHGLVTSIVIDPWCNWLVIGTSRGQLVLWDLRFRVPILSWEHPARAPIRHVWLCPT 1249 (1431)
T ss_pred cccceeEEEecCCceEEEEecCCceEEEEEeecCceeecccCcccCCcceEEeecc
Confidence 34679999999999999999999999999999777777776545566666666654
No 271
>KOG4714|consensus
Probab=97.16 E-value=0.00033 Score=33.08 Aligned_cols=36 Identities=28% Similarity=0.387 Sum_probs=30.4
Q ss_pred CCccccceEEEEECC-CCCEEEEecCCCcEEEEECCC
Q psy7061 1 MAAHRAYGLHCVFSP-DCRLLATTSADQTARIWNTED 36 (65)
Q Consensus 1 l~~~~~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 36 (65)
|+.|...+..+-|+| ++..+++++++|.+..|+..+
T Consensus 219 l~ahk~~i~eV~FHpk~p~~Lft~sedGslw~wdas~ 255 (319)
T KOG4714|consen 219 LKAHKAEIWEVHFHPKNPEHLFTCSEDGSLWHWDAST 255 (319)
T ss_pred HHHhhhhhhheeccCCCchheeEecCCCcEEEEcCCC
Confidence 346788889999999 467899999999999999763
No 272
>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....
Probab=97.14 E-value=0.0052 Score=30.02 Aligned_cols=58 Identities=16% Similarity=0.089 Sum_probs=36.9
Q ss_pred cceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccC----------------CCcEeEEEEccCCcEEe
Q psy7061 6 AYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTAN----------------QRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 6 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~v~~~~~~~~~~~i~ 64 (65)
..+....|+|+|+.++... ++.+++.+...+........+. -..-..+-|+|++++|+
T Consensus 43 ~~~~~~~~sP~g~~~~~v~-~~nly~~~~~~~~~~~lT~dg~~~i~nG~~dwvyeEEv~~~~~~~~WSpd~~~la 116 (353)
T PF00930_consen 43 PKLQDAKWSPDGKYIAFVR-DNNLYLRDLATGQETQLTTDGEPGIYNGVPDWVYEEEVFDRRSAVWWSPDSKYLA 116 (353)
T ss_dssp TTBSEEEE-SSSTEEEEEE-TTEEEEESSTTSEEEESES--TTTEEESB--HHHHHHTSSSSBSEEE-TTSSEEE
T ss_pred cccccceeecCCCeeEEEe-cCceEEEECCCCCeEEeccccceeEEcCccceeccccccccccceEECCCCCEEE
Confidence 3567889999999887765 5788998877664443322210 01224688999999886
No 273
>KOG2066|consensus
Probab=97.13 E-value=0.009 Score=32.36 Aligned_cols=42 Identities=17% Similarity=0.063 Sum_probs=35.5
Q ss_pred CCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccC
Q psy7061 16 DCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLD 59 (65)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 59 (65)
+|..+++++.||.+.+..+.+.+...+.. ...++.+++++|+
T Consensus 82 ~Gey~asCS~DGkv~I~sl~~~~~~~~~d--f~rpiksial~Pd 123 (846)
T KOG2066|consen 82 EGEYVASCSDDGKVVIGSLFTDDEITQYD--FKRPIKSIALHPD 123 (846)
T ss_pred CCceEEEecCCCcEEEeeccCCccceeEe--cCCcceeEEeccc
Confidence 48899999999999999988888776666 4677888899887
No 274
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=97.10 E-value=0.0079 Score=28.92 Aligned_cols=56 Identities=20% Similarity=0.096 Sum_probs=37.0
Q ss_pred ceEEEEECCCCCEEEEe-cCCCcEEEEECCC-Cce--EEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 7 YGLHCVFSPDCRLLATT-SADQTARIWNTED-FSL--VRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 7 ~v~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~--~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
....+.++|+++.+..+ ..++.+..|+++. +.. ..... .......++++|+++.++
T Consensus 36 ~~~~l~~spd~~~lyv~~~~~~~i~~~~~~~~g~l~~~~~~~--~~~~p~~i~~~~~g~~l~ 95 (330)
T PRK11028 36 QVQPMVISPDKRHLYVGVRPEFRVLSYRIADDGALTFAAESP--LPGSPTHISTDHQGRFLF 95 (330)
T ss_pred CCccEEECCCCCEEEEEECCCCcEEEEEECCCCceEEeeeec--CCCCceEEEECCCCCEEE
Confidence 45667889999876544 4578888898863 322 12222 233567899999998775
No 275
>KOG0321|consensus
Probab=97.04 E-value=0.00066 Score=35.48 Aligned_cols=35 Identities=17% Similarity=0.255 Sum_probs=30.6
Q ss_pred CccccceEEEEECCC-CCEEEEecCCCcEEEEECCC
Q psy7061 2 AAHRAYGLHCVFSPD-CRLLATTSADQTARIWNTED 36 (65)
Q Consensus 2 ~~~~~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 36 (65)
.+|.+.+-.++|.+. ...+++|+.|+.+.+||++.
T Consensus 141 ~GH~~SvkS~cf~~~n~~vF~tGgRDg~illWD~R~ 176 (720)
T KOG0321|consen 141 LGHTGSVKSECFMPTNPAVFCTGGRDGEILLWDCRC 176 (720)
T ss_pred cccccccchhhhccCCCcceeeccCCCcEEEEEEec
Confidence 479999999999995 46789999999999999873
No 276
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=97.01 E-value=0.0026 Score=32.02 Aligned_cols=54 Identities=19% Similarity=0.172 Sum_probs=34.1
Q ss_pred EEEEECCCCCEE-EEecCCCc--EEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 9 LHCVFSPDCRLL-ATTSADQT--ARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 9 ~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
....|+|+|+++ ++...++. ++++++...... .+.. ....-..-.|+|+|++|+
T Consensus 241 ~~P~fspDG~~l~f~~~rdg~~~iy~~dl~~~~~~-~Lt~-~~gi~~~Ps~spdG~~iv 297 (425)
T COG0823 241 GAPAFSPDGSKLAFSSSRDGSPDIYLMDLDGKNLP-RLTN-GFGINTSPSWSPDGSKIV 297 (425)
T ss_pred CCccCCCCCCEEEEEECCCCCccEEEEcCCCCcce-eccc-CCccccCccCCCCCCEEE
Confidence 346789999865 44445554 566676655533 3443 333344888999999885
No 277
>KOG2321|consensus
Probab=96.96 E-value=0.012 Score=31.04 Aligned_cols=58 Identities=21% Similarity=0.194 Sum_probs=41.4
Q ss_pred cceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeec-----cCC-----CcEeEEEEccCCcEE
Q psy7061 6 AYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGT-----ANQ-----RWVWDAAFTLDSKFL 63 (65)
Q Consensus 6 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~-----~~v~~~~~~~~~~~i 63 (65)
+.+..+..++.-.++++|..++.|.+||.++......+.. .+. ..|..+.|+.+|-.+
T Consensus 176 ~~lN~v~in~~hgLla~Gt~~g~VEfwDpR~ksrv~~l~~~~~v~s~pg~~~~~svTal~F~d~gL~~ 243 (703)
T KOG2321|consen 176 GELNVVSINEEHGLLACGTEDGVVEFWDPRDKSRVGTLDAASSVNSHPGGDAAPSVTALKFRDDGLHV 243 (703)
T ss_pred ccceeeeecCccceEEecccCceEEEecchhhhhheeeecccccCCCccccccCcceEEEecCCceeE
Confidence 5677888888767788888999999999987655544432 012 347888888766544
No 278
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=96.88 E-value=0.015 Score=28.65 Aligned_cols=57 Identities=16% Similarity=0.167 Sum_probs=40.4
Q ss_pred eEEEEECCCCCEEEEecC-CCcEEEEECCCCceEEEeec--cCCCcEeEEEEccCCcEEe
Q psy7061 8 GLHCVFSPDCRLLATTSA-DQTARIWNTEDFSLVRELGT--ANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 8 v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~i~ 64 (65)
+-...+.|+++.+++... -.++.+|++..+.....-.. ....+-..+.|+|+++++.
T Consensus 147 ~H~a~~tP~~~~l~v~DLG~Dri~~y~~~dg~L~~~~~~~v~~G~GPRHi~FHpn~k~aY 206 (346)
T COG2706 147 VHSANFTPDGRYLVVPDLGTDRIFLYDLDDGKLTPADPAEVKPGAGPRHIVFHPNGKYAY 206 (346)
T ss_pred cceeeeCCCCCEEEEeecCCceEEEEEcccCccccccccccCCCCCcceEEEcCCCcEEE
Confidence 556778999988877764 46799999986654222111 2567778999999998764
No 279
>KOG1517|consensus
Probab=96.87 E-value=0.013 Score=33.04 Aligned_cols=64 Identities=9% Similarity=0.005 Sum_probs=43.3
Q ss_pred Cccccc--eEEEEECCCC-CEEEEecCCCcEEEEECCCCceEE--Eeecc--CCCcEeEEEEccCCcEEeC
Q psy7061 2 AAHRAY--GLHCVFSPDC-RLLATTSADQTARIWNTEDFSLVR--ELGTA--NQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 2 ~~~~~~--v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~--~~~~v~~~~~~~~~~~i~s 65 (65)
+.|+.. |..+.+.+.| ..+++++.+|.+++||++...... ....+ .....+++..++....|+|
T Consensus 1251 R~h~~~~~Iv~~slq~~G~~elvSgs~~G~I~~~DlR~~~~e~~~~iv~~~~yGs~lTal~VH~hapiiAs 1321 (1387)
T KOG1517|consen 1251 REHNDVEPIVHLSLQRQGLGELVSGSQDGDIQLLDLRMSSKETFLTIVAHWEYGSALTALTVHEHAPIIAS 1321 (1387)
T ss_pred cccCCcccceeEEeecCCCcceeeeccCCeEEEEecccCcccccceeeeccccCccceeeeeccCCCeeee
Confidence 346665 8899998866 369999999999999999632211 22220 1224778888887777764
No 280
>KOG2314|consensus
Probab=96.85 E-value=0.015 Score=30.56 Aligned_cols=58 Identities=22% Similarity=0.164 Sum_probs=41.7
Q ss_pred ceEEEEECCCCCEEEEecC-----------CCcEEEEECCCCceEEEeec--cCCCcEeEEEEccCCcEEe
Q psy7061 7 YGLHCVFSPDCRLLATTSA-----------DQTARIWNTEDFSLVRELGT--ANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 7 ~v~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~i~ 64 (65)
.+..++|+|..+++++-+. ...+.+||+.+|...+.+.. .....-.-+.||.+.++++
T Consensus 251 ~Vq~idfSP~EkYLVT~s~~p~~~~~~d~e~~~l~IWDI~tG~lkrsF~~~~~~~~~WP~frWS~DdKy~A 321 (698)
T KOG2314|consen 251 GVQFIDFSPNEKYLVTYSPEPIIVEEDDNEGQQLIIWDIATGLLKRSFPVIKSPYLKWPIFRWSHDDKYFA 321 (698)
T ss_pred CceeeecCCccceEEEecCCccccCcccCCCceEEEEEccccchhcceeccCCCccccceEEeccCCceeE
Confidence 5778899998888877543 25699999999987666654 1223334678888888875
No 281
>KOG1645|consensus
Probab=96.85 E-value=0.0061 Score=30.64 Aligned_cols=58 Identities=21% Similarity=0.328 Sum_probs=45.0
Q ss_pred ccccceEEEEECCCCC-EEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcE
Q psy7061 3 AHRAYGLHCVFSPDCR-LLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKF 62 (65)
Q Consensus 3 ~~~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 62 (65)
++...|..+.|+|..+ .+..++.+..+.+.++.+......+.. ...+++++|.-+...
T Consensus 191 ~~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~~vssy~a--~~~~wSC~wDlde~h 249 (463)
T KOG1645|consen 191 GEGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSCVVSSYIA--YNQIWSCCWDLDERH 249 (463)
T ss_pred ccchhhhhhccCccccceeeeeccCceEEEEecccceeeeheec--cCCceeeeeccCCcc
Confidence 3455678889999766 577788889999999998777767765 478999999876543
No 282
>KOG1354|consensus
Probab=96.83 E-value=0.00094 Score=32.79 Aligned_cols=59 Identities=19% Similarity=0.333 Sum_probs=41.0
Q ss_pred ceEEEEECCC-CCEEEEecCCCcEEEEECCCCc-------eEEEeecc--------CCCcEeEEEEccCCcEEeC
Q psy7061 7 YGLHCVFSPD-CRLLATTSADQTARIWNTEDFS-------LVRELGTA--------NQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 7 ~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~--------~~~~v~~~~~~~~~~~i~s 65 (65)
-|++..|+|. .+.++.++..|.+++.|++..- .......+ --..|..+.|+++|+++++
T Consensus 215 VITsaEFhp~~cn~f~YSSSKGtIrLcDmR~~aLCd~hsKlfEepedp~~rsffseiIsSISDvKFs~sGryils 289 (433)
T KOG1354|consen 215 VITSAEFHPHHCNVFVYSSSKGTIRLCDMRQSALCDAHSKLFEEPEDPSSRSFFSEIISSISDVKFSHSGRYILS 289 (433)
T ss_pred HHhhhccCHhHccEEEEecCCCcEEEeechhhhhhcchhhhhccccCCcchhhHHHHhhhhhceEEccCCcEEEE
Confidence 4678889995 5788999999999999987321 11111110 1145678999999999875
No 283
>KOG3617|consensus
Probab=96.77 E-value=0.0011 Score=36.19 Aligned_cols=57 Identities=14% Similarity=0.110 Sum_probs=43.0
Q ss_pred eEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 8 GLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 8 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
+++++|+|..-.++.+-+.+.+-+|...+.+.-..... |...+..+.|+++|.-+.|
T Consensus 62 atSLCWHpe~~vLa~gwe~g~~~v~~~~~~e~htv~~t-h~a~i~~l~wS~~G~~l~t 118 (1416)
T KOG3617|consen 62 ATSLCWHPEEFVLAQGWEMGVSDVQKTNTTETHTVVET-HPAPIQGLDWSHDGTVLMT 118 (1416)
T ss_pred hhhhccChHHHHHhhccccceeEEEecCCceeeeeccC-CCCCceeEEecCCCCeEEE
Confidence 45678888766778888888888888765544434444 8999999999999987754
No 284
>KOG2315|consensus
Probab=96.73 E-value=0.027 Score=29.45 Aligned_cols=56 Identities=16% Similarity=0.077 Sum_probs=40.9
Q ss_pred ccceEEEEECCCCCE--EEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 5 RAYGLHCVFSPDCRL--LATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 5 ~~~v~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
.+.|.++.|++++.. ++.|-.-..+.+|+++ +..+..+. .+..+.+-|+|.|++|+
T Consensus 270 ~GPVhdv~W~~s~~EF~VvyGfMPAkvtifnlr-~~~v~df~---egpRN~~~fnp~g~ii~ 327 (566)
T KOG2315|consen 270 EGPVHDVTWSPSGREFAVVYGFMPAKVTIFNLR-GKPVFDFP---EGPRNTAFFNPHGNIIL 327 (566)
T ss_pred CCCceEEEECCCCCEEEEEEecccceEEEEcCC-CCEeEeCC---CCCccceEECCCCCEEE
Confidence 468999999999865 4556667788899987 44444443 45667888899998875
No 285
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=96.73 E-value=0.0096 Score=32.89 Aligned_cols=57 Identities=11% Similarity=0.107 Sum_probs=37.8
Q ss_pred ceEEEEECCCCCEEEEecC------CCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 7 YGLHCVFSPDCRLLATTSA------DQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 7 ~v~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
.-..++|-.||++++..+. ...+++|+-. |........ -.+--..++|.|.|..|++
T Consensus 211 ~~~~ISWRGDG~yFAVss~~~~~~~~R~iRVy~Re-G~L~stSE~-v~gLe~~l~WrPsG~lIA~ 273 (928)
T PF04762_consen 211 GRVRISWRGDGEYFAVSSVEPETGSRRVIRVYSRE-GELQSTSEP-VDGLEGALSWRPSGNLIAS 273 (928)
T ss_pred CceEEEECCCCcEEEEEEEEcCCCceeEEEEECCC-ceEEecccc-CCCccCCccCCCCCCEEEE
Confidence 4567889999998776654 2457788744 443333332 3344467899999998874
No 286
>KOG1064|consensus
Probab=96.70 E-value=0.0041 Score=36.65 Aligned_cols=36 Identities=11% Similarity=0.224 Sum_probs=31.8
Q ss_pred ccccceEEEEECCCCCEEEEecCCCcEEEEECCCCc
Q psy7061 3 AHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFS 38 (65)
Q Consensus 3 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 38 (65)
.|.+.++.+.+.|..+.+++|+.+|.+++||++...
T Consensus 2334 ~H~~gaT~l~~~P~~qllisggr~G~v~l~D~rqrq 2369 (2439)
T KOG1064|consen 2334 CHDGGATVLAYAPKHQLLISGGRKGEVCLFDIRQRQ 2369 (2439)
T ss_pred ecCCCceEEEEcCcceEEEecCCcCcEEEeehHHHH
Confidence 477889999999999999999999999999987543
No 287
>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats.
Probab=96.68 E-value=0.024 Score=29.66 Aligned_cols=28 Identities=11% Similarity=0.210 Sum_probs=25.6
Q ss_pred eEEEEECCCCCEEEEecCCCcEEEEECC
Q psy7061 8 GLHCVFSPDCRLLATTSADQTARIWNTE 35 (65)
Q Consensus 8 v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 35 (65)
+..++|+|+|..++.++..|.+.+||+.
T Consensus 302 P~~iaWHp~gai~~V~s~qGelQ~FD~A 329 (545)
T PF11768_consen 302 PTLIAWHPDGAIFVVGSEQGELQCFDMA 329 (545)
T ss_pred ceEEEEcCCCcEEEEEcCCceEEEEEee
Confidence 5678999999999999999999999976
No 288
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=96.48 E-value=0.035 Score=27.61 Aligned_cols=55 Identities=9% Similarity=0.039 Sum_probs=40.5
Q ss_pred eEEEEECCCCCEEEE-ec---------CCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCc-EEe
Q psy7061 8 GLHCVFSPDCRLLAT-TS---------ADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSK-FLL 64 (65)
Q Consensus 8 v~~~~~~~~~~~~~~-~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~i~ 64 (65)
...+.++++++.+.. .. ....+.++|..+.+.+..+.. ...+..++++|+++ .++
T Consensus 250 ~q~ia~~~dg~~lyV~~~~~~~~thk~~~~~V~ViD~~t~kvi~~i~v--G~~~~~iavS~Dgkp~ly 315 (352)
T TIGR02658 250 WQQVAYHRARDRIYLLADQRAKWTHKTASRFLFVVDAKTGKRLRKIEL--GHEIDSINVSQDAKPLLY 315 (352)
T ss_pred ceeEEEcCCCCEEEEEecCCccccccCCCCEEEEEECCCCeEEEEEeC--CCceeeEEECCCCCeEEE
Confidence 334788888876554 31 124688889988888888774 56899999999999 553
No 289
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=96.46 E-value=0.019 Score=28.49 Aligned_cols=55 Identities=18% Similarity=0.286 Sum_probs=33.9
Q ss_pred EEEEECCCCCEEEEe----cCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEE
Q psy7061 9 LHCVFSPDCRLLATT----SADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFL 63 (65)
Q Consensus 9 ~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i 63 (65)
..+.-+|+++++... .....+.++|.++.+.+..+.......+..+.|+++|+.+
T Consensus 272 lFi~thP~s~~vwvd~~~~~~~~~v~viD~~tl~~~~~i~~~~~~~~~h~ef~~dG~~v 330 (369)
T PF02239_consen 272 LFIKTHPDSRYVWVDTFLNPDADTVQVIDKKTLKVVKTITPGPGKRVVHMEFNPDGKEV 330 (369)
T ss_dssp --EE--TT-SEEEEE-TT-SSHT-EEEEECCGTEEEE-HHHHHT--EEEEEE-TTSSEE
T ss_pred ceeecCCCCccEEeeccCCCCCceEEEEECcCcceeEEEeccCCCcEeccEECCCCCEE
Confidence 556779999887655 3457899999998877766653233458999999999876
No 290
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=96.41 E-value=0.037 Score=27.11 Aligned_cols=57 Identities=21% Similarity=0.377 Sum_probs=36.8
Q ss_pred ceEEEEECCCCCEEEEec-CCCcEEEEECCC--Cce--EEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 7 YGLHCVFSPDCRLLATTS-ADQTARIWNTED--FSL--VRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 7 ~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~--~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
....+.++|+++++..+. ....+.+|+++. +.. +..... ....-..++++|++++++
T Consensus 246 ~~~~i~ispdg~~lyvsnr~~~sI~vf~~d~~~g~l~~~~~~~~-~G~~Pr~~~~s~~g~~l~ 307 (345)
T PF10282_consen 246 APAEIAISPDGRFLYVSNRGSNSISVFDLDPATGTLTLVQTVPT-GGKFPRHFAFSPDGRYLY 307 (345)
T ss_dssp SEEEEEE-TTSSEEEEEECTTTEEEEEEECTTTTTEEEEEEEEE-SSSSEEEEEE-TTSSEEE
T ss_pred CceeEEEecCCCEEEEEeccCCEEEEEEEecCCCceEEEEEEeC-CCCCccEEEEeCCCCEEE
Confidence 466788999998765444 567799999842 332 222222 345578899999999886
No 291
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=96.40 E-value=0.016 Score=29.37 Aligned_cols=53 Identities=13% Similarity=0.170 Sum_probs=31.1
Q ss_pred EEEECCCCCEEEE-ecCCCcEEEE--ECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 10 HCVFSPDCRLLAT-TSADQTARIW--NTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 10 ~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
.-.|+|+|++++. ....+...+| +.+.... ..+.. ....-....|+|+|++|+
T Consensus 286 ~Ps~spdG~~ivf~Sdr~G~p~I~~~~~~g~~~-~riT~-~~~~~~~p~~SpdG~~i~ 341 (425)
T COG0823 286 SPSWSPDGSKIVFTSDRGGRPQIYLYDLEGSQV-TRLTF-SGGGNSNPVWSPDGDKIV 341 (425)
T ss_pred CccCCCCCCEEEEEeCCCCCcceEEECCCCCce-eEeec-cCCCCcCccCCCCCCEEE
Confidence 4578999987644 4455654554 5443333 22222 222233888899999886
No 292
>KOG2695|consensus
Probab=96.36 E-value=0.012 Score=29.24 Aligned_cols=42 Identities=7% Similarity=0.044 Sum_probs=30.5
Q ss_pred cccceEEEEECC-CCCEEEEecCCCcEEEEECCCCce---EEEeec
Q psy7061 4 HRAYGLHCVFSP-DCRLLATTSADQTARIWNTEDFSL---VRELGT 45 (65)
Q Consensus 4 ~~~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 45 (65)
|...|+++..-. +++++.+++.++.+.+||++..+. +.+..+
T Consensus 297 h~Ssvtslq~Lq~s~q~LmaS~M~gkikLyD~R~~K~~~~V~qYeG 342 (425)
T KOG2695|consen 297 HDSSVTSLQILQFSQQKLMASDMTGKIKLYDLRATKCKKSVMQYEG 342 (425)
T ss_pred cCcchhhhhhhccccceEeeccCcCceeEeeehhhhcccceeeeec
Confidence 444566655444 567899999999999999986555 666665
No 293
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=96.29 E-value=0.048 Score=27.16 Aligned_cols=52 Identities=15% Similarity=0.321 Sum_probs=37.2
Q ss_pred ECCCCCEEEEe-c---------CCCcEEEEECCCCceEEEeeccC------CCcEeEEEEccCCcEEe
Q psy7061 13 FSPDCRLLATT-S---------ADQTARIWNTEDFSLVRELGTAN------QRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 13 ~~~~~~~~~~~-~---------~~~~~~~~~~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~i~ 64 (65)
++|+++.+..+ . .+..|.+||..+.+.+..+..+. ...-..++++|++++++
T Consensus 53 ~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~~~~i~~p~~p~~~~~~~~~~~~ls~dgk~l~ 120 (352)
T TIGR02658 53 VASDGSFFAHASTVYSRIARGKRTDYVEVIDPQTHLPIADIELPEGPRFLVGTYPWMTSLTPDNKTLL 120 (352)
T ss_pred ECCCCCEEEEEeccccccccCCCCCEEEEEECccCcEEeEEccCCCchhhccCccceEEECCCCCEEE
Confidence 78988765444 4 47789999999998887776411 12234788899998875
No 294
>PRK13616 lipoprotein LpqB; Provisional
Probab=96.26 E-value=0.044 Score=29.07 Aligned_cols=53 Identities=6% Similarity=-0.127 Sum_probs=30.7
Q ss_pred eEEEEECCCCCEEEEecCC------------CcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 8 GLHCVFSPDCRLLATTSAD------------QTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 8 v~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
.....|+|++..+...... +.+.+..++.+.... . ....+..++|+|+|..++
T Consensus 399 ~t~PsWspDG~~lw~v~dg~~~~~v~~~~~~gql~~~~vd~ge~~~---~-~~g~Issl~wSpDG~RiA 463 (591)
T PRK13616 399 LTRPSWSLDADAVWVVVDGNTVVRVIRDPATGQLARTPVDASAVAS---R-VPGPISELQLSRDGVRAA 463 (591)
T ss_pred CCCceECCCCCceEEEecCcceEEEeccCCCceEEEEeccCchhhh---c-cCCCcCeEEECCCCCEEE
Confidence 5567889987755444322 122222333222211 2 345799999999999876
No 295
>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3
Probab=96.23 E-value=0.04 Score=25.62 Aligned_cols=46 Identities=15% Similarity=0.291 Sum_probs=33.3
Q ss_pred CEEEEecCCCcEEEEECC--CCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 18 RLLATTSADQTARIWNTE--DFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
..+..+.....+.+|++. .......+.. -+.|..+.++..|++++|
T Consensus 29 d~Lfva~~g~~Vev~~l~~~~~~~~~~F~T--v~~V~~l~y~~~GDYlvT 76 (215)
T PF14761_consen 29 DALFVAASGCKVEVYDLEQEECPLLCTFST--VGRVLQLVYSEAGDYLVT 76 (215)
T ss_pred ceEEEEcCCCEEEEEEcccCCCceeEEEcc--hhheeEEEeccccceEEE
Confidence 445444667789999987 3344445553 588999999999999975
No 296
>KOG1409|consensus
Probab=96.21 E-value=0.018 Score=28.60 Aligned_cols=63 Identities=13% Similarity=0.120 Sum_probs=41.7
Q ss_pred CCccccceEEEEECCCCCEEEEecCCCcEEEEEC-CCCceEEEeeccCCCcEeEEEEccCCcEE
Q psy7061 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNT-EDFSLVRELGTANQRWVWDAAFTLDSKFL 63 (65)
Q Consensus 1 l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~i 63 (65)
++||...+.....-|..+.+.+.+.+..+++|-- +.+..-..+.......+..+.++++.+.+
T Consensus 20 ~eG~~d~vn~~~l~~~e~gv~~~s~drtvrv~lkrds~q~wpsI~~~mP~~~~~~~y~~e~~~L 83 (404)
T KOG1409|consen 20 IEGSQDDVNAAILIPKEEGVISVSEDRTVRVWLKRDSGQYWPSIYHYMPSPCSAMEYVSESRRL 83 (404)
T ss_pred hcCchhhhhhheeccCCCCeEEccccceeeeEEeccccccCchhhhhCCCCceEeeeeccceEE
Confidence 3577778888888887788999999999999944 34443333322234556666666655444
No 297
>PF15390 DUF4613: Domain of unknown function (DUF4613)
Probab=96.19 E-value=0.075 Score=28.43 Aligned_cols=53 Identities=17% Similarity=0.298 Sum_probs=29.5
Q ss_pred EEEECCCCCEEEEecCCCcEEEEECC--CCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 10 HCVFSPDCRLLATTSADQTARIWNTE--DFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
.+.|+|....++.-.....--+++.. +.+....+ . ..+.|++.+|.+||+.++
T Consensus 117 GCVWHPk~~iL~VLT~~dvSV~~sV~~d~srVkaDi-~-~~G~IhCACWT~DG~RLV 171 (671)
T PF15390_consen 117 GCVWHPKKAILTVLTARDVSVLPSVHCDSSRVKADI-K-TSGLIHCACWTKDGQRLV 171 (671)
T ss_pred cccccCCCceEEEEecCceeEeeeeeeCCceEEEec-c-CCceEEEEEecCcCCEEE
Confidence 45677766554433332222233333 22222223 3 578899999999998765
No 298
>KOG0974|consensus
Probab=96.10 E-value=0.075 Score=29.77 Aligned_cols=59 Identities=20% Similarity=0.411 Sum_probs=42.3
Q ss_pred ccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 3 AHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 3 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
+|+..+..+.+.|. .+++.+.|...++|+.. +.....+..+....++.++..++...++
T Consensus 216 gHsaRvw~~~~~~n--~i~t~gedctcrvW~~~-~~~l~~y~~h~g~~iw~~~~~~~~~~~v 274 (967)
T KOG0974|consen 216 GHSARVWACCFLPN--RIITVGEDCTCRVWGVN-GTQLEVYDEHSGKGIWKIAVPIGVIIKV 274 (967)
T ss_pred cccceeEEEEeccc--eeEEeccceEEEEEecc-cceehhhhhhhhcceeEEEEcCCceEEE
Confidence 68899999999987 89999999999999654 3333344443446677777766655544
No 299
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=96.07 E-value=0.061 Score=27.61 Aligned_cols=44 Identities=18% Similarity=0.206 Sum_probs=29.2
Q ss_pred CCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 17 CRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
|..++..+. +.+.+||..+++.+..+.. . .|..+.|++++.+++
T Consensus 117 G~LL~~~~~-~~i~~yDw~~~~~i~~i~v-~--~vk~V~Ws~~g~~va 160 (443)
T PF04053_consen 117 GNLLGVKSS-DFICFYDWETGKLIRRIDV-S--AVKYVIWSDDGELVA 160 (443)
T ss_dssp SSSEEEEET-TEEEEE-TTT--EEEEESS----E-EEEEE-TTSSEEE
T ss_pred CcEEEEECC-CCEEEEEhhHcceeeEEec-C--CCcEEEEECCCCEEE
Confidence 665555543 4799999999998888875 2 389999999988875
No 300
>KOG1920|consensus
Probab=95.94 E-value=0.14 Score=29.53 Aligned_cols=57 Identities=16% Similarity=0.173 Sum_probs=42.6
Q ss_pred cceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 6 AYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 6 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
..|.++.|..+.+.++.+...|.+.+.+..+... ..... -..+|.+++|+|++..++
T Consensus 69 ~~i~s~~fl~d~~~i~v~~~~G~iilvd~et~~~-eivg~-vd~GI~aaswS~Dee~l~ 125 (1265)
T KOG1920|consen 69 DEIVSVQFLADTNSICVITALGDIILVDPETLEL-EIVGN-VDNGISAASWSPDEELLA 125 (1265)
T ss_pred cceEEEEEecccceEEEEecCCcEEEEcccccce-eeeee-ccCceEEEeecCCCcEEE
Confidence 4688889988888888888888888887664432 12222 467899999999998765
No 301
>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal
Probab=95.74 E-value=0.087 Score=25.50 Aligned_cols=29 Identities=31% Similarity=0.505 Sum_probs=25.3
Q ss_pred eEEEEECCCCCEEEEecCCCcEEEEECCC
Q psy7061 8 GLHCVFSPDCRLLATTSADQTARIWNTED 36 (65)
Q Consensus 8 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 36 (65)
-..+.|+||+..++.+...+.+++|++-.
T Consensus 46 WRkl~WSpD~tlLa~a~S~G~i~vfdl~g 74 (282)
T PF15492_consen 46 WRKLAWSPDCTLLAYAESTGTIRVFDLMG 74 (282)
T ss_pred heEEEECCCCcEEEEEcCCCeEEEEeccc
Confidence 34688999999999999999999999864
No 302
>KOG3617|consensus
Probab=95.72 E-value=0.042 Score=30.76 Aligned_cols=34 Identities=21% Similarity=0.222 Sum_probs=30.8
Q ss_pred ccccceEEEEECCCCCEEEEecCCCcEEEEECCC
Q psy7061 3 AHRAYGLHCVFSPDCRLLATTSADQTARIWNTED 36 (65)
Q Consensus 3 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 36 (65)
.|..++..+.|+++|..++++..-+.+.+|.++.
T Consensus 99 th~a~i~~l~wS~~G~~l~t~d~~g~v~lwr~d~ 132 (1416)
T KOG3617|consen 99 THPAPIQGLDWSHDGTVLMTLDNPGSVHLWRYDV 132 (1416)
T ss_pred CCCCCceeEEecCCCCeEEEcCCCceeEEEEeee
Confidence 4778999999999999999999999999998873
No 303
>PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A ....
Probab=95.69 E-value=0.024 Score=18.62 Aligned_cols=18 Identities=17% Similarity=0.183 Sum_probs=12.4
Q ss_pred CCCcEeEEEEccCCcEEe
Q psy7061 47 NQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 47 ~~~~v~~~~~~~~~~~i~ 64 (65)
....-....|+|+|+.|+
T Consensus 7 ~~~~~~~p~~SpDGk~i~ 24 (39)
T PF07676_consen 7 SPGDDGSPAWSPDGKYIY 24 (39)
T ss_dssp SSSSEEEEEE-TTSSEEE
T ss_pred CCccccCEEEecCCCEEE
Confidence 345667888899988875
No 304
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=95.64 E-value=0.19 Score=28.69 Aligned_cols=57 Identities=11% Similarity=0.110 Sum_probs=39.5
Q ss_pred eEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeecc------------CCCcEeEEEEccCCcEEe
Q psy7061 8 GLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTA------------NQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 8 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~v~~~~~~~~~~~i~ 64 (65)
...+.+++++..+++-..++.|++|+..++......... .-.....++++++|+.++
T Consensus 806 P~Gvavd~dG~LYVADs~N~rIrviD~~tg~v~tiaG~G~~G~~dG~~~~a~l~~P~GIavd~dG~lyV 874 (1057)
T PLN02919 806 PLGVLCAKDGQIYVADSYNHKIKKLDPATKRVTTLAGTGKAGFKDGKALKAQLSEPAGLALGENGRLFV 874 (1057)
T ss_pred CceeeEeCCCcEEEEECCCCEEEEEECCCCeEEEEeccCCcCCCCCcccccccCCceEEEEeCCCCEEE
Confidence 356778888888888888999999998866544322110 112456788899988665
No 305
>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus
Probab=95.61 E-value=0.11 Score=26.62 Aligned_cols=40 Identities=23% Similarity=0.145 Sum_probs=33.0
Q ss_pred cceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeec
Q psy7061 6 AYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGT 45 (65)
Q Consensus 6 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 45 (65)
..+..+..+|.+++.+....-|+|.++|+..+..++.+.+
T Consensus 308 R~~~~i~~sP~~~laA~tDslGRV~LiD~~~~~vvrmWKG 347 (415)
T PF14655_consen 308 REGESICLSPSGRLAAVTDSLGRVLLIDVARGIVVRMWKG 347 (415)
T ss_pred ceEEEEEECCCCCEEEEEcCCCcEEEEECCCChhhhhhcc
Confidence 4577888999999888888889999999998877666654
No 306
>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins. It contains a characteristic DLL sequence motif.
Probab=95.60 E-value=0.031 Score=19.34 Aligned_cols=31 Identities=29% Similarity=0.354 Sum_probs=24.3
Q ss_pred cceEEEEECCC-C--CEEEEecCCCcEEEEECCC
Q psy7061 6 AYGLHCVFSPD-C--RLLATTSADQTARIWNTED 36 (65)
Q Consensus 6 ~~v~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~ 36 (65)
+.+-++.|+|+ + ..++.+-..+.+.++|+++
T Consensus 1 GAvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~ 34 (43)
T PF10313_consen 1 GAVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRS 34 (43)
T ss_pred CCeEEEEeCCCCCcccEEEEEccCCeEEEEEccc
Confidence 35678999984 3 4778887889999999984
No 307
>KOG2395|consensus
Probab=95.52 E-value=0.073 Score=28.16 Aligned_cols=47 Identities=15% Similarity=0.133 Sum_probs=34.5
Q ss_pred CCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 17 CRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
.-.++.++.+|.+++|+-...+.-..+.+ -...|..+..+.+|++|+
T Consensus 441 sG~IvvgS~~GdIRLYdri~~~AKTAlPg-LG~~I~hVdvtadGKwil 487 (644)
T KOG2395|consen 441 SGYIVVGSLKGDIRLYDRIGRRAKTALPG-LGDAIKHVDVTADGKWIL 487 (644)
T ss_pred CceEEEeecCCcEEeehhhhhhhhhcccc-cCCceeeEEeeccCcEEE
Confidence 34688899999999998643333333444 678888888888998876
No 308
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=95.47 E-value=0.12 Score=25.39 Aligned_cols=58 Identities=19% Similarity=0.288 Sum_probs=39.1
Q ss_pred ceEEEEECCCCCEEEEec-CCCcEEEEECCC-CceEEE---ee---------ccCCCcEeEEEEccCCcEEe
Q psy7061 7 YGLHCVFSPDCRLLATTS-ADQTARIWNTED-FSLVRE---LG---------TANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 7 ~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~---~~---------~~~~~~v~~~~~~~~~~~i~ 64 (65)
..+.+.++|+++.++.+. .++.+.++++.. +..... .. .+.....+++.++|++++++
T Consensus 88 ~p~~i~~~~~g~~l~vany~~g~v~v~~l~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~ 159 (345)
T PF10282_consen 88 SPCHIAVDPDGRFLYVANYGGGSVSVFPLDDDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVY 159 (345)
T ss_dssp CEEEEEECTTSSEEEEEETTTTEEEEEEECTTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEE
T ss_pred CcEEEEEecCCCEEEEEEccCCeEEEEEccCCcccceeeeecccCCCCCcccccccccceeEEECCCCCEEE
Confidence 456788899998776655 588999999986 332222 11 01346678999999999875
No 309
>KOG2041|consensus
Probab=95.45 E-value=0.19 Score=27.93 Aligned_cols=58 Identities=10% Similarity=0.036 Sum_probs=42.8
Q ss_pred cceEEEEECCCCCEEEEecCCCcEEEEECCCCc----e-----------EEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 6 AYGLHCVFSPDCRLLATTSADQTARIWNTEDFS----L-----------VRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 6 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-----------~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
....++.|..+..+++.++.+|.+++..+.+.. . -.++.+ |+..|.-+.|+.+.+.+.
T Consensus 15 vkL~c~~WNke~gyIAcgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeG-H~~sV~vvTWNe~~QKLT 87 (1189)
T KOG2041|consen 15 VKLHCAEWNKESGYIACGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEG-HNASVMVVTWNENNQKLT 87 (1189)
T ss_pred ceEEEEEEcccCCeEEeccccceeEEEEccccCCcccccccccccccchhhhhcc-CcceEEEEEecccccccc
Confidence 467789999988999999999999998765321 1 112334 899999999988766543
No 310
>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=95.39 E-value=0.011 Score=29.07 Aligned_cols=59 Identities=14% Similarity=0.273 Sum_probs=39.0
Q ss_pred ceEEEEECCC-CCEEEEecCCCcEEEEECCCCc-------eEEE-eec-------cCCCcEeEEEEccCCcEEeC
Q psy7061 7 YGLHCVFSPD-CRLLATTSADQTARIWNTEDFS-------LVRE-LGT-------ANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 7 ~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-------~~~~-~~~-------~~~~~v~~~~~~~~~~~i~s 65 (65)
-|++..|+|. ...+..++..|.+++-+++... .... ..+ .--..+..+.|+++|++|++
T Consensus 223 VItSaeFhp~~cn~fmYSsSkG~Ikl~DlRq~alcdn~~klfe~~~D~v~~~ff~eivsSISD~kFs~ngryIls 297 (460)
T COG5170 223 VITSAEFHPEMCNVFMYSSSKGEIKLNDLRQSALCDNSKKLFELTIDGVDVDFFEEIVSSISDFKFSDNGRYILS 297 (460)
T ss_pred HHhhcccCHhHcceEEEecCCCcEEehhhhhhhhccCchhhhhhccCcccchhHHHHhhhhcceEEcCCCcEEEE
Confidence 4677889995 4677788889999998887211 0000 000 01255678999999999874
No 311
>KOG4499|consensus
Probab=95.22 E-value=0.14 Score=24.59 Aligned_cols=43 Identities=12% Similarity=0.081 Sum_probs=35.8
Q ss_pred CCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEc
Q psy7061 14 SPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFT 57 (65)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 57 (65)
..+|+..++.-+.+.|..+++.+++.+..+.- ....+.+++|-
T Consensus 220 D~eG~L~Va~~ng~~V~~~dp~tGK~L~eikl-Pt~qitsccFg 262 (310)
T KOG4499|consen 220 DTEGNLYVATFNGGTVQKVDPTTGKILLEIKL-PTPQITSCCFG 262 (310)
T ss_pred ccCCcEEEEEecCcEEEEECCCCCcEEEEEEc-CCCceEEEEec
Confidence 45677778888889999999999999888887 67788888883
No 312
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=95.21 E-value=0.17 Score=25.32 Aligned_cols=57 Identities=18% Similarity=0.215 Sum_probs=37.5
Q ss_pred eEEEEECCCCCEEEEec-CCCcEEEEECCC-CceEEE--eeccCCC----------cEeEEEEccCCcEEeC
Q psy7061 8 GLHCVFSPDCRLLATTS-ADQTARIWNTED-FSLVRE--LGTANQR----------WVWDAAFTLDSKFLLT 65 (65)
Q Consensus 8 v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~--~~~~~~~----------~v~~~~~~~~~~~i~s 65 (65)
.+.++.+++++.++++. ..+.+.++.++. +..... ... |.. .++...++|+++++++
T Consensus 91 p~yvsvd~~g~~vf~AnY~~g~v~v~p~~~dG~l~~~v~~~~-h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v 161 (346)
T COG2706 91 PCYVSVDEDGRFVFVANYHSGSVSVYPLQADGSLQPVVQVVK-HTGSGPHERQESPHVHSANFTPDGRYLVV 161 (346)
T ss_pred CeEEEECCCCCEEEEEEccCceEEEEEcccCCccccceeeee-cCCCCCCccccCCccceeeeCCCCCEEEE
Confidence 36788888888776655 467888988864 322111 111 222 2888999999988763
No 313
>KOG3621|consensus
Probab=95.19 E-value=0.087 Score=28.57 Aligned_cols=33 Identities=9% Similarity=0.045 Sum_probs=29.4
Q ss_pred cccceEEEEECCCCCEEEEecCCCcEEEEECCC
Q psy7061 4 HRAYGLHCVFSPDCRLLATTSADQTARIWNTED 36 (65)
Q Consensus 4 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 36 (65)
|...|+++.|++++..+.+|...|.|.+-.++.
T Consensus 123 ~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L~s 155 (726)
T KOG3621|consen 123 HKCRVTALEWSKNGMKLYSGDSQGKVVLTELDS 155 (726)
T ss_pred CCceEEEEEecccccEEeecCCCceEEEEEech
Confidence 677899999999999999999999988877765
No 314
>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....
Probab=95.18 E-value=0.084 Score=26.02 Aligned_cols=36 Identities=17% Similarity=0.165 Sum_probs=24.3
Q ss_pred CcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 27 QTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
+...++++.++....... .........|+|+|+.++
T Consensus 23 ~~y~i~d~~~~~~~~l~~--~~~~~~~~~~sP~g~~~~ 58 (353)
T PF00930_consen 23 GDYYIYDIETGEITPLTP--PPPKLQDAKWSPDGKYIA 58 (353)
T ss_dssp EEEEEEETTTTEEEESS---EETTBSEEEE-SSSTEEE
T ss_pred eeEEEEecCCCceEECcC--CccccccceeecCCCeeE
Confidence 357788888765543333 356788999999998875
No 315
>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin. These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus
Probab=95.00 E-value=0.15 Score=23.73 Aligned_cols=50 Identities=10% Similarity=0.074 Sum_probs=34.2
Q ss_pred CCCCEEEEecCCCcEEEEECCCCceEEEe------ec-------cCCCcEeEEEEccCCcEEe
Q psy7061 15 PDCRLLATTSADQTARIWNTEDFSLVREL------GT-------ANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~-------~~~~~v~~~~~~~~~~~i~ 64 (65)
..+++++.-..+|.+++||+...+.+... .. .....|..+..+.+|..++
T Consensus 20 ~~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV 82 (219)
T PF07569_consen 20 CNGSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIV 82 (219)
T ss_pred eCCCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEE
Confidence 35778888899999999999976654332 11 1345667777777776654
No 316
>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
Probab=94.83 E-value=0.19 Score=26.48 Aligned_cols=56 Identities=21% Similarity=0.306 Sum_probs=37.8
Q ss_pred cceEEEEECCCCCEEEEecCCC---------------cEEEEECCCCceEEEeeccCCCc--Ee-EEEEccCCcE
Q psy7061 6 AYGLHCVFSPDCRLLATTSADQ---------------TARIWNTEDFSLVRELGTANQRW--VW-DAAFTLDSKF 62 (65)
Q Consensus 6 ~~v~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~--v~-~~~~~~~~~~ 62 (65)
..|..++|+|.++++.+=.... .+.+||+.++..+..+.. -... .+ -++|+-+.++
T Consensus 72 ~~V~~~~fSP~~kYL~tw~~~pi~~pe~e~sp~~~~n~~~vwd~~sg~iv~sf~~-~~q~~~~Wp~~k~s~~D~y 145 (561)
T COG5354 72 PDVKYLDFSPNEKYLVTWSREPIIEPEIEISPFTSKNNVFVWDIASGMIVFSFNG-ISQPYLGWPVLKFSIDDKY 145 (561)
T ss_pred CCceecccCcccceeeeeccCCccChhhccCCccccCceeEEeccCceeEeeccc-cCCcccccceeeeeecchh
Confidence 4677889999988887644322 488999999888887765 2222 23 5666655544
No 317
>KOG1912|consensus
Probab=94.78 E-value=0.14 Score=28.49 Aligned_cols=57 Identities=14% Similarity=0.091 Sum_probs=41.9
Q ss_pred CccccceEEEEECCCC------------CEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccC
Q psy7061 2 AAHRAYGLHCVFSPDC------------RLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLD 59 (65)
Q Consensus 2 ~~~~~~v~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 59 (65)
+.|+..|+.+.|.|.. ..++++...|.+.+||...+..+..+.. +...+..++|-+.
T Consensus 52 e~h~s~V~~VrWap~~~p~~llS~~~~~lliAsaD~~GrIil~d~~~~s~~~~l~~-~~~~~qdl~W~~~ 120 (1062)
T KOG1912|consen 52 ELHQSAVTSVRWAPAPSPRDLLSPSSSQLLIASADISGRIILVDFVLASVINWLSH-SNDSVQDLCWVPA 120 (1062)
T ss_pred ccCccceeEEEeccCCCchhccCccccceeEEeccccCcEEEEEehhhhhhhhhcC-CCcchhheeeeec
Confidence 4577888999887632 1356666788999999887777766666 7788888888653
No 318
>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....
Probab=94.68 E-value=0.25 Score=24.81 Aligned_cols=54 Identities=20% Similarity=0.151 Sum_probs=34.5
Q ss_pred EEEEECCCCCEEEEe-cCCC----cEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 9 LHCVFSPDCRLLATT-SADQ----TARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 9 ~~~~~~~~~~~~~~~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
....++|++++++.+ +..| .++++++.+++.+..... ......+.|.++++.++
T Consensus 127 ~~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~d~i~--~~~~~~~~W~~d~~~~~ 185 (414)
T PF02897_consen 127 GGFSVSPDGKRLAYSLSDGGSEWYTLRVFDLETGKFLPDGIE--NPKFSSVSWSDDGKGFF 185 (414)
T ss_dssp EEEEETTTSSEEEEEEEETTSSEEEEEEEETTTTEEEEEEEE--EEESEEEEECTTSSEEE
T ss_pred eeeeECCCCCEEEEEecCCCCceEEEEEEECCCCcCcCCccc--ccccceEEEeCCCCEEE
Confidence 357789999876543 3333 488999998876554322 11122389999877653
No 319
>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates. The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.
Probab=94.68 E-value=0.3 Score=25.63 Aligned_cols=36 Identities=31% Similarity=0.361 Sum_probs=26.3
Q ss_pred eEEEEECC----CCCEEEEecCCCcEEEEECCCCceEEEe
Q psy7061 8 GLHCVFSP----DCRLLATTSADQTARIWNTEDFSLVREL 43 (65)
Q Consensus 8 v~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 43 (65)
......+. +...+++...|+.+++|++.++..+...
T Consensus 217 ~~~~~~~~~~~~~~~~l~tl~~D~~LRiW~l~t~~~~~~~ 256 (547)
T PF11715_consen 217 AASLAVSSSEINDDTFLFTLSRDHTLRIWSLETGQCLATI 256 (547)
T ss_dssp EEEEEE-----ETTTEEEEEETTSEEEEEETTTTCEEEEE
T ss_pred cceEEEecceeCCCCEEEEEeCCCeEEEEECCCCeEEEEe
Confidence 34445544 5678889999999999999998885543
No 320
>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=94.22 E-value=0.32 Score=24.11 Aligned_cols=52 Identities=29% Similarity=0.394 Sum_probs=35.7
Q ss_pred EECCCCCEEEEecCC-----CcEEEEECCCC-ceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 12 VFSPDCRLLATTSAD-----QTARIWNTEDF-SLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 12 ~~~~~~~~~~~~~~~-----~~~~~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
.|+|+|.++...-+| +.+-+|+.+.+ ..+..+.. |.-.-+.+.|.+||+.++
T Consensus 120 vfs~dG~~LYATEndfd~~rGViGvYd~r~~fqrvgE~~t-~GiGpHev~lm~DGrtlv 177 (366)
T COG3490 120 VFSPDGRLLYATENDFDPNRGVIGVYDAREGFQRVGEFST-HGIGPHEVTLMADGRTLV 177 (366)
T ss_pred ccCCCCcEEEeecCCCCCCCceEEEEecccccceeccccc-CCcCcceeEEecCCcEEE
Confidence 478888876554432 45778887732 34455555 777788999999998875
No 321
>KOG3630|consensus
Probab=94.01 E-value=0.7 Score=27.19 Aligned_cols=59 Identities=15% Similarity=0.133 Sum_probs=39.2
Q ss_pred cceEEEEECCCCCEEEEecCCCcEEEEECCCC--ceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 6 AYGLHCVFSPDCRLLATTSADQTARIWNTEDF--SLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 6 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
...+++.|+|.|+.++.+...+.+.-|...-. ..+..........|.+++|-....+++
T Consensus 199 ~~~Tav~WSprGKQl~iG~nnGt~vQy~P~leik~~ip~Pp~~e~yrvl~v~Wl~t~eflv 259 (1405)
T KOG3630|consen 199 NSQTAVLWSPRGKQLFIGRNNGTEVQYEPSLEIKSEIPEPPVEENYRVLSVTWLSTQEFLV 259 (1405)
T ss_pred cceeeEEeccccceeeEecCCCeEEEeecccceeecccCCCcCCCcceeEEEEecceeEEE
Confidence 46789999999999999999998877765422 222222221246788888865554443
No 322
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=93.48 E-value=0.38 Score=22.41 Aligned_cols=56 Identities=18% Similarity=0.150 Sum_probs=32.6
Q ss_pred cceEEEEECCCCCEEEEecCC--------CcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 6 AYGLHCVFSPDCRLLATTSAD--------QTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 6 ~~v~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
.....+.+.++|+..++.... +.++.++.. ++. ..... .-...+.++|+|+++.++
T Consensus 86 ~~~ND~~vd~~G~ly~t~~~~~~~~~~~~g~v~~~~~~-~~~-~~~~~-~~~~pNGi~~s~dg~~ly 149 (246)
T PF08450_consen 86 NRPNDVAVDPDGNLYVTDSGGGGASGIDPGSVYRIDPD-GKV-TVVAD-GLGFPNGIAFSPDGKTLY 149 (246)
T ss_dssp EEEEEEEE-TTS-EEEEEECCBCTTCGGSEEEEEEETT-SEE-EEEEE-EESSEEEEEEETTSSEEE
T ss_pred CCCceEEEcCCCCEEEEecCCCccccccccceEEECCC-CeE-EEEec-CcccccceEECCcchhee
Confidence 346678889998876665443 335555555 333 23332 234568899999988653
No 323
>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A.
Probab=93.13 E-value=0.18 Score=25.62 Aligned_cols=56 Identities=13% Similarity=0.105 Sum_probs=22.2
Q ss_pred cceEEEEECCCCCEE-EEecCCC--cEEEEECCCCceEEEeeccCCCcEeEEEEccCCcE
Q psy7061 6 AYGLHCVFSPDCRLL-ATTSADQ--TARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKF 62 (65)
Q Consensus 6 ~~v~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 62 (65)
...+.-.|.++|+++ ..+..++ .+++.++.+++....... .........++|+.+.
T Consensus 36 ~YF~~~~ft~dG~kllF~s~~dg~~nly~lDL~t~~i~QLTdg-~g~~~~g~~~s~~~~~ 94 (386)
T PF14583_consen 36 LYFYQNCFTDDGRKLLFASDFDGNRNLYLLDLATGEITQLTDG-PGDNTFGGFLSPDDRA 94 (386)
T ss_dssp --TTS--B-TTS-EEEEEE-TTSS-EEEEEETTT-EEEE---S-S-B-TTT-EE-TTSSE
T ss_pred eeecCCCcCCCCCEEEEEeccCCCcceEEEEcccCEEEECccC-CCCCccceEEecCCCe
Confidence 344455778888655 4444444 466667777776544443 2222223444555444
No 324
>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]
Probab=93.11 E-value=0.55 Score=23.19 Aligned_cols=56 Identities=25% Similarity=0.268 Sum_probs=30.3
Q ss_pred eEEEEECCCCCEEEEecC---------CCcEEEEECC-CCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 8 GLHCVFSPDCRLLATTSA---------DQTARIWNTE-DFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 8 v~~~~~~~~~~~~~~~~~---------~~~~~~~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
.......|+|...+..-. ...-.+|.++ .+..+..... +-..-+.++|||+++.+.
T Consensus 113 ~ND~~v~pdG~~wfgt~~~~~~~~~~~~~~G~lyr~~p~g~~~~l~~~-~~~~~NGla~SpDg~tly 178 (307)
T COG3386 113 PNDGVVDPDGRIWFGDMGYFDLGKSEERPTGSLYRVDPDGGVVRLLDD-DLTIPNGLAFSPDGKTLY 178 (307)
T ss_pred CCceeEcCCCCEEEeCCCccccCccccCCcceEEEEcCCCCEEEeecC-cEEecCceEECCCCCEEE
Confidence 345556677764433222 1112355544 4444444444 345557899999997653
No 325
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=92.70 E-value=0.66 Score=23.03 Aligned_cols=40 Identities=23% Similarity=0.292 Sum_probs=30.3
Q ss_pred ccceEEEEECCCCCEEEEec-CCCcEEEEECCCCceEEEee
Q psy7061 5 RAYGLHCVFSPDCRLLATTS-ADQTARIWNTEDFSLVRELG 44 (65)
Q Consensus 5 ~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 44 (65)
.+++-++.++.++..++.++ ..+.+.+|+..++..+....
T Consensus 216 ~~Y~gSIa~~~~g~~ia~tsPrGg~~~~~d~~tg~~~~~~~ 256 (305)
T PF07433_consen 216 NGYIGSIAADRDGRLIAVTSPRGGRVAVWDAATGRLLGSVP 256 (305)
T ss_pred CCceEEEEEeCCCCEEEEECCCCCEEEEEECCCCCEeeccc
Confidence 45788899999887765444 57789999999888765544
No 326
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=92.69 E-value=0.53 Score=21.95 Aligned_cols=54 Identities=19% Similarity=0.143 Sum_probs=38.9
Q ss_pred eEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEE-ccCCcEE
Q psy7061 8 GLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAF-TLDSKFL 63 (65)
Q Consensus 8 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~i 63 (65)
.-.+.+..+|+..++....+.|..++.+ ++.+..+.. ....+.+++| -++.+.|
T Consensus 186 pDG~~vD~~G~l~va~~~~~~I~~~~p~-G~~~~~i~~-p~~~~t~~~fgg~~~~~L 240 (246)
T PF08450_consen 186 PDGLAVDSDGNLWVADWGGGRIVVFDPD-GKLLREIEL-PVPRPTNCAFGGPDGKTL 240 (246)
T ss_dssp EEEEEEBTTS-EEEEEETTTEEEEEETT-SCEEEEEE--SSSSEEEEEEESTTSSEE
T ss_pred CCcceEcCCCCEEEEEcCCCEEEEECCC-ccEEEEEcC-CCCCEEEEEEECCCCCEE
Confidence 4567788888887777788899999987 777777776 4458899999 4554444
No 327
>PRK02888 nitrous-oxide reductase; Validated
Probab=92.68 E-value=0.95 Score=24.81 Aligned_cols=36 Identities=11% Similarity=0.125 Sum_probs=23.5
Q ss_pred CcEEEEECCC----C-ceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 27 QTARIWNTED----F-SLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 27 ~~~~~~~~~~----~-~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
+.|.+.|..+ + ..+..+. -....+.+.++|+|++++
T Consensus 296 n~V~VID~~t~~~~~~~v~~yIP--VGKsPHGV~vSPDGkyly 336 (635)
T PRK02888 296 SKVPVVDGRKAANAGSALTRYVP--VPKNPHGVNTSPDGKYFI 336 (635)
T ss_pred CEEEEEECCccccCCcceEEEEE--CCCCccceEECCCCCEEE
Confidence 4566677665 2 2333333 356678899999999876
No 328
>KOG0309|consensus
Probab=92.63 E-value=0.47 Score=26.62 Aligned_cols=55 Identities=16% Similarity=0.178 Sum_probs=38.5
Q ss_pred CccccceEEEEECCCC-CEEEEecCCCcEEEEECCCC-ceEEEeeccCCCcEeEEEEc
Q psy7061 2 AAHRAYGLHCVFSPDC-RLLATTSADQTARIWNTEDF-SLVRELGTANQRWVWDAAFT 57 (65)
Q Consensus 2 ~~~~~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~~~~~~ 57 (65)
-+|...++.+.|.+.. ..+++++-+..+..|++++. ..+..... -......++|+
T Consensus 111 hghsraitd~n~~~q~pdVlatcsvdt~vh~wd~rSp~~p~ys~~~-w~s~asqVkwn 167 (1081)
T KOG0309|consen 111 HGHSRAITDINFNPQHPDVLATCSVDTYVHAWDMRSPHRPFYSTSS-WRSAASQVKWN 167 (1081)
T ss_pred ecCccceeccccCCCCCcceeeccccccceeeeccCCCcceeeeec-ccccCceeeec
Confidence 4688889999999854 46788999999999999864 34444433 33444555554
No 329
>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex. Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm
Probab=92.56 E-value=0.78 Score=23.53 Aligned_cols=55 Identities=11% Similarity=0.063 Sum_probs=35.9
Q ss_pred cceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCC
Q psy7061 6 AYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDS 60 (65)
Q Consensus 6 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 60 (65)
+.+..++.+|+++.++.-..++.+.+...+-.+....+..........+.|.-+.
T Consensus 217 ~~i~~iavSpng~~iAl~t~~g~l~v~ssDf~~~~~e~~~~~~~~p~~~~WCG~d 271 (410)
T PF04841_consen 217 GPIIKIAVSPNGKFIALFTDSGNLWVVSSDFSEKLCEFDTDSKSPPKQMAWCGND 271 (410)
T ss_pred CCeEEEEECCCCCEEEEEECCCCEEEEECcccceeEEeecCcCCCCcEEEEECCC
Confidence 4688899999999888888888888776554444444433123444566665443
No 330
>KOG1275|consensus
Probab=92.50 E-value=1.2 Score=25.74 Aligned_cols=46 Identities=13% Similarity=0.208 Sum_probs=36.4
Q ss_pred CCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 16 DCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
+++.+.+|...|.|.+.|..+.+.+.++.. |.+.+..+.. .|..++
T Consensus 186 Nnr~lf~G~t~G~V~LrD~~s~~~iht~~a-Hs~siSDfDv--~GNlLi 231 (1118)
T KOG1275|consen 186 NNRNLFCGDTRGTVFLRDPNSFETIHTFDA-HSGSISDFDV--QGNLLI 231 (1118)
T ss_pred cCcEEEeecccceEEeecCCcCceeeeeec-cccceeeeec--cCCeEE
Confidence 567788888999999999999999999998 8888877644 444444
No 331
>KOG0309|consensus
Probab=92.50 E-value=0.09 Score=29.06 Aligned_cols=60 Identities=13% Similarity=0.127 Sum_probs=35.5
Q ss_pred CccccceEEEEECCCC-CEEEEecCCCcEEEEECCCCce-EEEeeccCCCcEeEEEEccCCcE
Q psy7061 2 AAHRAYGLHCVFSPDC-RLLATTSADQTARIWNTEDFSL-VRELGTANQRWVWDAAFTLDSKF 62 (65)
Q Consensus 2 ~~~~~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~ 62 (65)
++|...+..++|.... ..+.+++.++.|++|+...... -..... ....++..++-|-|..
T Consensus 198 K~~vs~vn~~~fnr~~~s~~~s~~~d~tvkfw~y~kSt~e~~~~vt-t~~piw~~r~~Pfg~g 259 (1081)
T KOG0309|consen 198 KGHVSSVNSIDFNRFKYSEIMSSSNDGTVKFWDYSKSTTESKRTVT-TNFPIWRGRYLPFGEG 259 (1081)
T ss_pred cccceeeehHHHhhhhhhhhcccCCCCceeeecccccccccceecc-ccCcceeccccccCce
Confidence 4555666666665422 3477888999999999874322 111222 3455666666665443
No 332
>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]
Probab=92.45 E-value=0.57 Score=25.24 Aligned_cols=47 Identities=15% Similarity=0.118 Sum_probs=32.2
Q ss_pred CCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 17 CRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
+-+++.++..|.+++|+--..+.-..+.+ -...+..+..+.+|++++
T Consensus 573 sGyIa~as~kGDirLyDRig~rAKtalP~-lG~aIk~idvta~Gk~il 619 (776)
T COG5167 573 SGYIAAASRKGDIRLYDRIGKRAKTALPG-LGDAIKHIDVTANGKHIL 619 (776)
T ss_pred CceEEEecCCCceeeehhhcchhhhcCcc-cccceeeeEeecCCcEEE
Confidence 34688899999999998654443333444 556677777777777765
No 333
>TIGR02171 Fb_sc_TIGR02171 Fibrobacter succinogenes paralogous family TIGR02171. This model describes a paralogous family of the rumen bacterium Fibrobacter succinogenes. Eleven members are found in Fibrobacter succinogenes S85, averaging over 900 amino acids in length. More than half are predicted lipoproteins. The function is unknown.
Probab=92.42 E-value=1.2 Score=25.48 Aligned_cols=33 Identities=21% Similarity=0.189 Sum_probs=22.8
Q ss_pred cccceEEEEECCCCCEEEE-ecCCC-----cEEEEECCC
Q psy7061 4 HRAYGLHCVFSPDCRLLAT-TSADQ-----TARIWNTED 36 (65)
Q Consensus 4 ~~~~v~~~~~~~~~~~~~~-~~~~~-----~~~~~~~~~ 36 (65)
+...+...+|+|+|+.++. .+..+ .|++.++++
T Consensus 348 ~~~~i~sP~~SPDG~~vAY~ts~e~~~g~s~vYv~~L~t 386 (912)
T TIGR02171 348 DTISVYHPDISPDGKKVAFCTGIEGLPGKSSVYVRNLNA 386 (912)
T ss_pred CCCceecCcCCCCCCEEEEEEeecCCCCCceEEEEehhc
Confidence 3456788899999998866 33222 477777774
No 334
>KOG1354|consensus
Probab=92.20 E-value=0.55 Score=23.90 Aligned_cols=29 Identities=17% Similarity=0.064 Sum_probs=25.1
Q ss_pred ceEEEEECCCCCEEEEecCCCcEEEEECC
Q psy7061 7 YGLHCVFSPDCRLLATTSADQTARIWNTE 35 (65)
Q Consensus 7 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 35 (65)
-+.++.|...|..+++|..+|+|-+|.-.
T Consensus 27 iis~vef~~~Ge~LatGdkgGRVv~f~r~ 55 (433)
T KOG1354|consen 27 IISAVEFDHYGERLATGDKGGRVVLFERE 55 (433)
T ss_pred ceeeEEeecccceEeecCCCCeEEEeecc
Confidence 36788999999999999999999998654
No 335
>KOG1920|consensus
Probab=91.92 E-value=1 Score=26.51 Aligned_cols=55 Identities=9% Similarity=0.156 Sum_probs=31.8
Q ss_pred EEEEECCCCCEEEEec-----CCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 9 LHCVFSPDCRLLATTS-----ADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 9 ~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
+.+.|--+|++++... ....+++|+-. +.. ..........-.+++|-|.|..+++
T Consensus 199 ~~IsWRgDg~~fAVs~~~~~~~~RkirV~drE-g~L-ns~se~~~~l~~~LsWkPsgs~iA~ 258 (1265)
T KOG1920|consen 199 TSISWRGDGEYFAVSFVESETGTRKIRVYDRE-GAL-NSTSEPVEGLQHSLSWKPSGSLIAA 258 (1265)
T ss_pred ceEEEccCCcEEEEEEEeccCCceeEEEeccc-chh-hcccCcccccccceeecCCCCeEee
Confidence 3478888898776632 23678888865 221 1111112333457777777776653
No 336
>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
Probab=91.83 E-value=1.2 Score=23.89 Aligned_cols=57 Identities=7% Similarity=0.067 Sum_probs=34.3
Q ss_pred cccceEEEEECCCCCEE--EEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 4 HRAYGLHCVFSPDCRLL--ATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 4 ~~~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
..+.|....|.|.++.+ ++|.....+.+++++.. ....+ ....-..+.|+|.+++++
T Consensus 273 ~~~pVhdf~W~p~S~~F~vi~g~~pa~~s~~~lr~N-l~~~~---Pe~~rNT~~fsp~~r~il 331 (561)
T COG5354 273 LKDPVHDFTWEPLSSRFAVISGYMPASVSVFDLRGN-LRFYF---PEQKRNTIFFSPHERYIL 331 (561)
T ss_pred ccccceeeeecccCCceeEEecccccceeecccccc-eEEec---CCcccccccccCcccEEE
Confidence 35678899999987654 44567778888888744 21111 122334445566665554
No 337
>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A.
Probab=91.82 E-value=0.88 Score=22.52 Aligned_cols=56 Identities=16% Similarity=0.149 Sum_probs=29.8
Q ss_pred cceEEEEECCCCCEEEEecCCCcEEEEECCCC-ceEEEeeccCCCcEeEEEEccCCcEE
Q psy7061 6 AYGLHCVFSPDCRLLATTSADQTARIWNTEDF-SLVRELGTANQRWVWDAAFTLDSKFL 63 (65)
Q Consensus 6 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~i 63 (65)
+.+..+...+++.+++.+.......-|+.-.. -...... ....+..+.|.|++...
T Consensus 145 gs~~~~~r~~dG~~vavs~~G~~~~s~~~G~~~w~~~~r~--~~~riq~~gf~~~~~lw 201 (302)
T PF14870_consen 145 GSINDITRSSDGRYVAVSSRGNFYSSWDPGQTTWQPHNRN--SSRRIQSMGFSPDGNLW 201 (302)
T ss_dssp --EEEEEE-TTS-EEEEETTSSEEEEE-TT-SS-EEEE----SSS-EEEEEE-TTS-EE
T ss_pred ceeEeEEECCCCcEEEEECcccEEEEecCCCccceEEccC--ccceehhceecCCCCEE
Confidence 45667777888998877766666566664322 2222222 46889999999987664
No 338
>KOG1517|consensus
Probab=91.39 E-value=1.9 Score=25.53 Aligned_cols=45 Identities=13% Similarity=0.161 Sum_probs=30.5
Q ss_pred CCCEEEEecCCCcEEEEECCCCc---eEEEeeccCCCc--EeEEEEccCCc
Q psy7061 16 DCRLLATTSADQTARIWNTEDFS---LVRELGTANQRW--VWDAAFTLDSK 61 (65)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~--v~~~~~~~~~~ 61 (65)
.|+.++.|-.||.+++||.+... .+..... |... |..+.+.+.|.
T Consensus 1220 ~gn~i~AGfaDGsvRvyD~R~a~~ds~v~~~R~-h~~~~~Iv~~slq~~G~ 1269 (1387)
T KOG1517|consen 1220 HGNIIAAGFADGSVRVYDRRMAPPDSLVCVYRE-HNDVEPIVHLSLQRQGL 1269 (1387)
T ss_pred CCceEEEeecCCceEEeecccCCccccceeecc-cCCcccceeEEeecCCC
Confidence 47889999999999999987432 2333333 5444 77777766543
No 339
>KOG2377|consensus
Probab=91.23 E-value=1.4 Score=23.60 Aligned_cols=54 Identities=19% Similarity=0.077 Sum_probs=36.0
Q ss_pred ccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEE----EeeccCCCcEeEEEEccC
Q psy7061 5 RAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVR----ELGTANQRWVWDAAFTLD 59 (65)
Q Consensus 5 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~v~~~~~~~~ 59 (65)
.+.|.++.|++|.+.++....+..+.+++....+... .... ....+..+.|+.+
T Consensus 66 ~G~I~SIkFSlDnkilAVQR~~~~v~f~nf~~d~~~l~~~~~ck~-k~~~IlGF~W~~s 123 (657)
T KOG2377|consen 66 KGEIKSIKFSLDNKILAVQRTSKTVDFCNFIPDNSQLEYTQECKT-KNANILGFCWTSS 123 (657)
T ss_pred CCceeEEEeccCcceEEEEecCceEEEEecCCCchhhHHHHHhcc-CcceeEEEEEecC
Confidence 4689999999999989888889999988874322111 1111 2344666666554
No 340
>PRK10115 protease 2; Provisional
Probab=91.17 E-value=1.6 Score=24.14 Aligned_cols=54 Identities=20% Similarity=0.053 Sum_probs=32.3
Q ss_pred ceEEEEECCCCCEEEEecC-CC----cEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEE
Q psy7061 7 YGLHCVFSPDCRLLATTSA-DQ----TARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFL 63 (65)
Q Consensus 7 ~v~~~~~~~~~~~~~~~~~-~~----~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i 63 (65)
.+..+.++|++++++.+.. ++ .+++.++.++..+..... ... ..++|.++++.+
T Consensus 128 ~l~~~~~Spdg~~la~~~d~~G~E~~~l~v~d~~tg~~l~~~i~-~~~--~~~~w~~D~~~~ 186 (686)
T PRK10115 128 TLGGMAITPDNTIMALAEDFLSRRQYGIRFRNLETGNWYPELLD-NVE--PSFVWANDSWTF 186 (686)
T ss_pred EEeEEEECCCCCEEEEEecCCCcEEEEEEEEECCCCCCCCcccc-Ccc--eEEEEeeCCCEE
Confidence 3566788999987655432 22 467777776653322222 111 458898887755
No 341
>KOG0882|consensus
Probab=91.14 E-value=0.24 Score=25.90 Aligned_cols=38 Identities=26% Similarity=0.290 Sum_probs=31.6
Q ss_pred cceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEe
Q psy7061 6 AYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVREL 43 (65)
Q Consensus 6 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 43 (65)
+...++.|+|++..+.+-+.+..|+.+...+++.+..+
T Consensus 202 t~pts~Efsp~g~qistl~~DrkVR~F~~KtGklvqei 239 (558)
T KOG0882|consen 202 TEPTSFEFSPDGAQISTLNPDRKVRGFVFKTGKLVQEI 239 (558)
T ss_pred cCccceEEccccCcccccCcccEEEEEEeccchhhhhh
Confidence 45678999999999999999999999999887755443
No 342
>PF03088 Str_synth: Strictosidine synthase; InterPro: IPR018119 This entry represents a conserved region found in strictosidine synthase (4.3.3.2 from EC), a key enzyme in alkaloid biosynthesis. It catalyses the Pictet-Spengler stereospecific condensation of tryptamine with secologanin to form strictosidine []. The structure of the native enzyme from the Indian medicinal plant Rauvolfia serpentina (Serpentwood) (Devilpepper) represents the first example of a six-bladed four-stranded beta-propeller fold from the plant kingdom [].; GO: 0016844 strictosidine synthase activity, 0009058 biosynthetic process; PDB: 2FPB_A 2V91_B 2FP8_A 3V1S_B 2FPC_A 2VAQ_A 2FP9_B.
Probab=91.08 E-value=0.56 Score=18.87 Aligned_cols=37 Identities=14% Similarity=0.091 Sum_probs=23.6
Q ss_pred CCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 26 DQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
.|.+..|++.+++......+ -...+.++.++++..++
T Consensus 36 ~GRll~ydp~t~~~~vl~~~--L~fpNGVals~d~~~vl 72 (89)
T PF03088_consen 36 TGRLLRYDPSTKETTVLLDG--LYFPNGVALSPDESFVL 72 (89)
T ss_dssp -EEEEEEETTTTEEEEEEEE--ESSEEEEEE-TTSSEEE
T ss_pred CcCEEEEECCCCeEEEehhC--CCccCeEEEcCCCCEEE
Confidence 45677788877765444443 34567888899988664
No 343
>PRK13616 lipoprotein LpqB; Provisional
Probab=90.54 E-value=1.7 Score=23.61 Aligned_cols=55 Identities=13% Similarity=0.136 Sum_probs=31.1
Q ss_pred ceEEEEECCCCCEEEEec------CCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEE
Q psy7061 7 YGLHCVFSPDCRLLATTS------ADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFL 63 (65)
Q Consensus 7 ~v~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i 63 (65)
.+....++|+++.++... .+..-.+|-...+.....+.. ........|+|+++.+
T Consensus 351 ~vsspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~gg~~~~lt~--g~~~t~PsWspDG~~l 411 (591)
T PRK13616 351 NITSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPLGGVAVQVLE--GHSLTRPSWSLDADAV 411 (591)
T ss_pred CcccceECCCCCEEEEEEeecCCCCCcceEEEEEeCCCcceeeec--CCCCCCceECCCCCce
Confidence 466778899998765554 233334443332222223322 2237888899987654
No 344
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=90.46 E-value=2.3 Score=24.87 Aligned_cols=33 Identities=9% Similarity=0.064 Sum_probs=27.3
Q ss_pred ceEEEEECCCCCEEEEecCCCcEEEEECCCCce
Q psy7061 7 YGLHCVFSPDCRLLATTSADQTARIWNTEDFSL 39 (65)
Q Consensus 7 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 39 (65)
....+.++++|+.+++-..++.+++|++.++..
T Consensus 860 ~P~GIavd~dG~lyVaDt~Nn~Irvid~~~~~~ 892 (1057)
T PLN02919 860 EPAGLALGENGRLFVADTNNSLIRYLDLNKGEA 892 (1057)
T ss_pred CceEEEEeCCCCEEEEECCCCEEEEEECCCCcc
Confidence 466788899999888888899999999987654
No 345
>TIGR02171 Fb_sc_TIGR02171 Fibrobacter succinogenes paralogous family TIGR02171. This model describes a paralogous family of the rumen bacterium Fibrobacter succinogenes. Eleven members are found in Fibrobacter succinogenes S85, averaging over 900 amino acids in length. More than half are predicted lipoproteins. The function is unknown.
Probab=90.41 E-value=2 Score=24.71 Aligned_cols=36 Identities=8% Similarity=-0.022 Sum_probs=25.4
Q ss_pred CcEEEEECCCCceEEE-eeccCCCcEeEEEEccCCcEEe
Q psy7061 27 QTARIWNTEDFSLVRE-LGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 27 ~~~~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
+.+.+-|.+....... +. ....+.+..|||+|+.++
T Consensus 329 ~~L~~~D~dG~n~~~ve~~--~~~~i~sP~~SPDG~~vA 365 (912)
T TIGR02171 329 GNLAYIDYTKGASRAVEIE--DTISVYHPDISPDGKKVA 365 (912)
T ss_pred CeEEEEecCCCCceEEEec--CCCceecCcCCCCCCEEE
Confidence 4666667665554433 33 578889999999999885
No 346
>KOG1064|consensus
Probab=90.37 E-value=1.5 Score=27.51 Aligned_cols=55 Identities=18% Similarity=0.087 Sum_probs=38.0
Q ss_pred ceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCc
Q psy7061 7 YGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSK 61 (65)
Q Consensus 7 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 61 (65)
.+....=+|.....++++.|+.+++|.--.+..+..+.......|..+.|+.+|.
T Consensus 2210 ~v~r~~sHp~~~~Yltgs~dgsv~~~~w~~~~~v~~~rt~g~s~vtr~~f~~qGn 2264 (2439)
T KOG1064|consen 2210 NVRRMTSHPSDPYYLTGSQDGSVRMFEWGHGQQVVCFRTAGNSRVTRSRFNHQGN 2264 (2439)
T ss_pred ceeeecCCCCCceEEecCCCceEEEEeccCCCeEEEeeccCcchhhhhhhcccCC
Confidence 3444555666678899999999999987766666666542346677777766554
No 347
>KOG0882|consensus
Probab=88.84 E-value=2.3 Score=22.65 Aligned_cols=61 Identities=13% Similarity=0.071 Sum_probs=42.1
Q ss_pred cccceEEEEECCCCCEEEEecCCCcEEEEECCC------CceEEEee------c--cCCCcEeEEEEccCCcEEe
Q psy7061 4 HRAYGLHCVFSPDCRLLATTSADQTARIWNTED------FSLVRELG------T--ANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 4 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~------~--~~~~~v~~~~~~~~~~~i~ 64 (65)
|...|....+.+.+...++....|.|..|.... .+.--.+. . .......++.++|++..+.
T Consensus 143 H~sPV~~i~y~qa~Ds~vSiD~~gmVEyWs~e~~~qfPr~~l~~~~K~eTdLy~f~K~Kt~pts~Efsp~g~qis 217 (558)
T KOG0882|consen 143 HFSPVKKIRYNQAGDSAVSIDISGMVEYWSAEGPFQFPRTNLNFELKHETDLYGFPKAKTEPTSFEFSPDGAQIS 217 (558)
T ss_pred ccCceEEEEeeccccceeeccccceeEeecCCCcccCccccccccccccchhhcccccccCccceEEccccCccc
Confidence 777889999999888888888899999998762 11100000 0 1345557888899887765
No 348
>KOG4532|consensus
Probab=88.78 E-value=1.9 Score=21.46 Aligned_cols=29 Identities=10% Similarity=0.055 Sum_probs=24.9
Q ss_pred eEEEEECCCCCEEEEecCCCcEEEEECCC
Q psy7061 8 GLHCVFSPDCRLLATTSADQTARIWNTED 36 (65)
Q Consensus 8 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 36 (65)
...+.+++++++.++.+....|.+|.++.
T Consensus 161 ~ns~~~snd~~~~~~Vgds~~Vf~y~id~ 189 (344)
T KOG4532|consen 161 QNSLHYSNDPSWGSSVGDSRRVFRYAIDD 189 (344)
T ss_pred eeeeEEcCCCceEEEecCCCcceEEEeCC
Confidence 56788999999998888888999998874
No 349
>PF01436 NHL: NHL repeat; InterPro: IPR001258 The NHL repeat, named after NCL-1, HT2A and Lin-41, is found largely in a large number of eukaryotic and prokaryotic proteins. For example, the repeat is found in a variety of enzymes of the copper type II, ascorbate-dependent monooxygenase family which catalyse the C terminus alpha-amidation of biological peptides []. In many it occurs in tandem arrays, for example in the ringfinger beta-box, coiled-coil (RBCC) eukaryotic growth regulators []. The 'Brain Tumor' protein (Brat) is one such growth regulator that contains a 6-bladed NHL-repeat beta-propeller [, ]. The NHL repeats are also found in serine/threonine protein kinase (STPK) in diverse range of pathogenic bacteria. These STPK are transmembrane receptors with a intracellular N-terminal kinase domain and extracellular C-terminal sensor domain. In the STPK, PknD, from Mycobacterium tuberculosis, the sensor domain forms a rigid, six-bladed b-propeller composed of NHL repeats with a flexible tether to the transmembrane domain.; GO: 0005515 protein binding; PDB: 3FVZ_A 3FW0_A 1RWL_A 1RWI_A 1Q7F_A.
Probab=88.65 E-value=0.48 Score=14.46 Aligned_cols=23 Identities=9% Similarity=0.218 Sum_probs=12.9
Q ss_pred EEEEECCCCCEEEEecCCCcEEE
Q psy7061 9 LHCVFSPDCRLLATTSADQTARI 31 (65)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~ 31 (65)
..++..++|+.+++=...+.+.+
T Consensus 5 ~gvav~~~g~i~VaD~~n~rV~v 27 (28)
T PF01436_consen 5 HGVAVDSDGNIYVADSGNHRVQV 27 (28)
T ss_dssp EEEEEETTSEEEEEECCCTEEEE
T ss_pred cEEEEeCCCCEEEEECCCCEEEE
Confidence 44555566666655555555544
No 350
>PF05787 DUF839: Bacterial protein of unknown function (DUF839); InterPro: IPR008557 This family consists of bacterial proteins of unknown function.
Probab=88.54 E-value=2.5 Score=22.70 Aligned_cols=19 Identities=21% Similarity=0.291 Sum_probs=16.0
Q ss_pred cCCCcEeEEEEccCCcEEe
Q psy7061 46 ANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 46 ~~~~~v~~~~~~~~~~~i~ 64 (65)
....++..++|+|+++.++
T Consensus 499 P~gaE~tG~~fspDg~tlF 517 (524)
T PF05787_consen 499 PNGAEITGPCFSPDGRTLF 517 (524)
T ss_pred CCCcccccceECCCCCEEE
Confidence 3568889999999999875
No 351
>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []. Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.
Probab=88.45 E-value=1.8 Score=20.86 Aligned_cols=59 Identities=10% Similarity=0.062 Sum_probs=34.7
Q ss_pred ccceEEEEECCCCC-EEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 5 RAYGLHCVFSPDCR-LLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 5 ~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
...+..+.|.|+.. .++...+.+.+...+.+ ++.+..+.-..-...-.+++..++.+++
T Consensus 21 ~~e~SGLTy~pd~~tLfaV~d~~~~i~els~~-G~vlr~i~l~g~~D~EgI~y~g~~~~vl 80 (248)
T PF06977_consen 21 LDELSGLTYNPDTGTLFAVQDEPGEIYELSLD-GKVLRRIPLDGFGDYEGITYLGNGRYVL 80 (248)
T ss_dssp -S-EEEEEEETTTTEEEEEETTTTEEEEEETT---EEEEEE-SS-SSEEEEEE-STTEEEE
T ss_pred cCCccccEEcCCCCeEEEEECCCCEEEEEcCC-CCEEEEEeCCCCCCceeEEEECCCEEEE
Confidence 34588999999755 56777777888777764 6666665431234455666665555554
No 352
>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=88.15 E-value=2.2 Score=21.41 Aligned_cols=39 Identities=23% Similarity=0.269 Sum_probs=25.0
Q ss_pred ccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEe
Q psy7061 5 RAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVREL 43 (65)
Q Consensus 5 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 43 (65)
...+.++.|+|+.+.+.+.......-++--..|..+..+
T Consensus 85 ~~nvS~LTynp~~rtLFav~n~p~~iVElt~~Gdlirti 123 (316)
T COG3204 85 TANVSSLTYNPDTRTLFAVTNKPAAIVELTKEGDLIRTI 123 (316)
T ss_pred cccccceeeCCCcceEEEecCCCceEEEEecCCceEEEe
Confidence 345889999999988777666555444433445554443
No 353
>KOG2695|consensus
Probab=87.97 E-value=0.5 Score=24.03 Aligned_cols=32 Identities=6% Similarity=-0.070 Sum_probs=26.2
Q ss_pred cceEEEEECCCCCEEEEecCCCcEEEEECCCC
Q psy7061 6 AYGLHCVFSPDCRLLATTSADQTARIWNTEDF 37 (65)
Q Consensus 6 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 37 (65)
++|.+..|...++.+..|..++.+...|++..
T Consensus 253 sDVfAlQf~~s~nLv~~GcRngeI~~iDLR~r 284 (425)
T KOG2695|consen 253 SDVFALQFAGSDNLVFNGCRNGEIFVIDLRCR 284 (425)
T ss_pred hhHHHHHhcccCCeeEecccCCcEEEEEeeec
Confidence 46777888777788888889999999998854
No 354
>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []. Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.
Probab=87.63 E-value=2.1 Score=20.66 Aligned_cols=58 Identities=14% Similarity=0.067 Sum_probs=30.1
Q ss_pred cceEEEEECCC-CCEEEEecCCCcEEEEECCCCceEEEeec---cCC-----CcEeEEEEccCCcEEe
Q psy7061 6 AYGLHCVFSPD-CRLLATTSADQTARIWNTEDFSLVRELGT---ANQ-----RWVWDAAFTLDSKFLL 64 (65)
Q Consensus 6 ~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-----~~v~~~~~~~~~~~i~ 64 (65)
.++..+.++|. ++.++-+.....+..++ ..++....+.- .+. .-.-.+++.++|+.++
T Consensus 171 ~d~S~l~~~p~t~~lliLS~es~~l~~~d-~~G~~~~~~~L~~g~~gl~~~~~QpEGIa~d~~G~LYI 237 (248)
T PF06977_consen 171 RDLSGLSYDPRTGHLLILSDESRLLLELD-RQGRVVSSLSLDRGFHGLSKDIPQPEGIAFDPDGNLYI 237 (248)
T ss_dssp S---EEEEETTTTEEEEEETTTTEEEEE--TT--EEEEEE-STTGGG-SS---SEEEEEE-TT--EEE
T ss_pred ccccceEEcCCCCeEEEEECCCCeEEEEC-CCCCEEEEEEeCCcccCcccccCCccEEEECCCCCEEE
Confidence 45778889885 45667777788888888 44554433322 010 2245788899988765
No 355
>PF10584 Proteasome_A_N: Proteasome subunit A N-terminal signature; InterPro: IPR000426 The proteasome (or macropain) (3.4.25.1 from EC) [, , , , ] is a eukaryotic and archaeal multicatalytic proteinase complex that seems to be involved in an ATP/ubiquitin-dependent nonlysosomal proteolytic pathway. In eukaryotes the proteasome is composed of about 28 distinct subunits which form a highly ordered ring-shaped structure (20S ring) of about 700 kDa. Most proteasome subunits can be classified, on the basis on sequence similarities into two groups, alpha (A) and beta (B). This family contains the alpha subunit sequences which range from 210 to 290 amino acids. These sequences are classified as non-peptidase homologues in MEROPS peptidase family T1 (clan PB(T)). ; GO: 0004175 endopeptidase activity, 0006511 ubiquitin-dependent protein catabolic process, 0019773 proteasome core complex, alpha-subunit complex; PDB: 3H4P_M 1IRU_O 3UN4_U 1FNT_A 3OEV_G 3OEU_U 3SDK_U 3DY3_G 3MG7_G 3L5Q_C ....
Probab=87.08 E-value=0.16 Score=15.19 Aligned_cols=8 Identities=25% Similarity=0.692 Sum_probs=5.1
Q ss_pred EEccCCcE
Q psy7061 55 AFTLDSKF 62 (65)
Q Consensus 55 ~~~~~~~~ 62 (65)
.|||+|+.
T Consensus 7 ~FSp~Grl 14 (23)
T PF10584_consen 7 TFSPDGRL 14 (23)
T ss_dssp SBBTTSSB
T ss_pred eECCCCeE
Confidence 36777764
No 356
>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=86.80 E-value=2.8 Score=21.34 Aligned_cols=30 Identities=17% Similarity=0.086 Sum_probs=25.9
Q ss_pred cceEEEEECCCCCEEEEecCCCcEEEEECC
Q psy7061 6 AYGLHCVFSPDCRLLATTSADQTARIWNTE 35 (65)
Q Consensus 6 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 35 (65)
..|+++.|...|.++++|...|+|-+|.-.
T Consensus 27 d~ItaVefd~tg~YlatGDkgGRVvlfer~ 56 (460)
T COG5170 27 DKITAVEFDETGLYLATGDKGGRVVLFERE 56 (460)
T ss_pred ceeeEEEeccccceEeecCCCceEEEeecc
Confidence 458899999989999999999999998754
No 357
>KOG1645|consensus
Probab=86.51 E-value=3.3 Score=21.77 Aligned_cols=32 Identities=6% Similarity=0.133 Sum_probs=25.4
Q ss_pred cceEEEEECCCC-CEEEEecCCCcEEEEECCCC
Q psy7061 6 AYGLHCVFSPDC-RLLATTSADQTARIWNTEDF 37 (65)
Q Consensus 6 ~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 37 (65)
..+.+++|+-+. +.+..|..+|.|.+||++..
T Consensus 236 ~~~wSC~wDlde~h~IYaGl~nG~VlvyD~R~~ 268 (463)
T KOG1645|consen 236 NQIWSCCWDLDERHVIYAGLQNGMVLVYDMRQP 268 (463)
T ss_pred CCceeeeeccCCcceeEEeccCceEEEEEccCC
Confidence 457788898865 56777888999999999843
No 358
>KOG2066|consensus
Probab=85.80 E-value=4.8 Score=23.05 Aligned_cols=58 Identities=7% Similarity=0.118 Sum_probs=36.7
Q ss_pred cccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccC-----CCcEeEEEEccCCcEEe
Q psy7061 4 HRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTAN-----QRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 4 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~i~ 64 (65)
-.+.|.++.|. |+.++.++..| +++|+......+......+ ......+.|.++.+.++
T Consensus 159 ~eG~I~~i~W~--g~lIAWand~G-v~vyd~~~~~~l~~i~~p~~~~R~e~fpphl~W~~~~~LVI 221 (846)
T KOG2066|consen 159 GEGPIHSIKWR--GNLIAWANDDG-VKVYDTPTRQRLTNIPPPSQSVRPELFPPHLHWQDEDRLVI 221 (846)
T ss_pred CccceEEEEec--CcEEEEecCCC-cEEEeccccceeeccCCCCCCCCcccCCCceEecCCCeEEE
Confidence 34678888884 78888877555 7888988777766655411 11123566666655543
No 359
>COG3211 PhoX Predicted phosphatase [General function prediction only]
Probab=85.67 E-value=4.3 Score=22.37 Aligned_cols=56 Identities=20% Similarity=0.106 Sum_probs=32.3
Q ss_pred EEEEECCCCCEEEEecCCC------cEEEEE-----CCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 9 LHCVFSPDCRLLATTSADQ------TARIWN-----TEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~------~~~~~~-----~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
-.+.|.|.|++.+...... ..-++. ...++....+......++...+|+||++.++
T Consensus 503 Dnl~fD~~GrLWi~TDg~~s~~~~~~~G~~~m~~~~p~~g~~~rf~t~P~g~E~tG~~FspD~~TlF 569 (616)
T COG3211 503 DNLAFDPWGRLWIQTDGSGSTLRNRFRGVTQMLTPDPKTGTIKRFLTGPIGCEFTGPCFSPDGKTLF 569 (616)
T ss_pred CceEECCCCCEEEEecCCCCccCcccccccccccCCCccceeeeeccCCCcceeecceeCCCCceEE
Confidence 3567778777655443322 111221 1233344444444568999999999998775
No 360
>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs. It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].
Probab=85.01 E-value=5.1 Score=22.63 Aligned_cols=33 Identities=18% Similarity=0.191 Sum_probs=26.7
Q ss_pred ccceEEEEECCCC---CEEEEecCCCcEEEEECCCC
Q psy7061 5 RAYGLHCVFSPDC---RLLATTSADQTARIWNTEDF 37 (65)
Q Consensus 5 ~~~v~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 37 (65)
...|..+.|+|.+ ..++.-..|+.+++|++...
T Consensus 146 ~~~i~qv~WhP~s~~~~~l~vLtsdn~lR~y~~~~~ 181 (717)
T PF10168_consen 146 SLEIKQVRWHPWSESDSHLVVLTSDNTLRLYDISDP 181 (717)
T ss_pred CceEEEEEEcCCCCCCCeEEEEecCCEEEEEecCCC
Confidence 3468899999964 67888888999999999753
No 361
>KOG4649|consensus
Probab=84.26 E-value=3.8 Score=20.47 Aligned_cols=33 Identities=15% Similarity=0.075 Sum_probs=25.2
Q ss_pred ECCCCCEEEEecCCCcEEEEECCCCceEEEeec
Q psy7061 13 FSPDCRLLATTSADQTARIWNTEDFSLVRELGT 45 (65)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 45 (65)
..+++..+-.++.|+..+..|+++...+...+-
T Consensus 101 ~d~~~glIycgshd~~~yalD~~~~~cVykskc 133 (354)
T KOG4649|consen 101 CDFDGGLIYCGSHDGNFYALDPKTYGCVYKSKC 133 (354)
T ss_pred EcCCCceEEEecCCCcEEEecccccceEEeccc
Confidence 455677788888999999888888777766553
No 362
>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length. This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.
Probab=83.29 E-value=6 Score=22.08 Aligned_cols=60 Identities=8% Similarity=0.117 Sum_probs=39.2
Q ss_pred ccceEEEEEC--CCCCEEEEecCCCcEEEEECCC------C---ceEEEe--eccCCCcEeEEEEccCCcEEe
Q psy7061 5 RAYGLHCVFS--PDCRLLATTSADQTARIWNTED------F---SLVREL--GTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 5 ~~~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~~------~---~~~~~~--~~~~~~~v~~~~~~~~~~~i~ 64 (65)
.+.|..++|. |+++.+++.+-.+.|.++.... + ..+..+ .......+.+..|-++|..++
T Consensus 72 ~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~Q~R~dy~~~~p~w~~i~~i~i~~~T~h~Igds~Wl~~G~LvV 144 (631)
T PF12234_consen 72 DDPIRDLDWTSTPDGQSILAVGFPHHVLLYTQLRYDYTNKGPSWAPIRKIDISSHTPHPIGDSIWLKDGTLVV 144 (631)
T ss_pred CCceeeceeeecCCCCEEEEEEcCcEEEEEEccchhhhcCCcccceeEEEEeecCCCCCccceeEecCCeEEE
Confidence 4578888884 4778888888888888886531 1 112222 121336778899999988775
No 363
>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat. This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).
Probab=83.23 E-value=1.3 Score=14.34 Aligned_cols=31 Identities=23% Similarity=0.322 Sum_probs=20.5
Q ss_pred CCCCEE-EEecCCCcEEEEECCCCceEEEeec
Q psy7061 15 PDCRLL-ATTSADQTARIWNTEDFSLVRELGT 45 (65)
Q Consensus 15 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 45 (65)
|+++.+ ++...++.+.+++..+...+.....
T Consensus 1 pd~~~lyv~~~~~~~v~~id~~~~~~~~~i~v 32 (42)
T TIGR02276 1 PDGTKLYVTNSGSNTVSVIDTATNKVIATIPV 32 (42)
T ss_pred CCCCEEEEEeCCCCEEEEEECCCCeEEEEEEC
Confidence 455544 4444577888899887776666554
No 364
>PF12566 DUF3748: Protein of unknown function (DUF3748); InterPro: IPR022223 This domain family is found in bacteria and eukaryotes, and is approximately 120 amino acids in length.
Probab=82.30 E-value=1.7 Score=18.55 Aligned_cols=22 Identities=36% Similarity=0.453 Sum_probs=15.2
Q ss_pred EECCCCCEEEEecCCCcEEEEE
Q psy7061 12 VFSPDCRLLATTSADQTARIWN 33 (65)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~ 33 (65)
.|+|||+++....+|+.+.-.+
T Consensus 74 vfSpDG~~lSFTYNDhVmhe~d 95 (122)
T PF12566_consen 74 VFSPDGSWLSFTYNDHVMHELD 95 (122)
T ss_pred EECCCCCEEEEEecchhhcccc
Confidence 5788888887777777655433
No 365
>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region
Probab=82.11 E-value=3 Score=17.70 Aligned_cols=27 Identities=22% Similarity=0.219 Sum_probs=19.8
Q ss_pred EEEEECCCC-CEEEEecCCCcEEEEECC
Q psy7061 9 LHCVFSPDC-RLLATTSADQTARIWNTE 35 (65)
Q Consensus 9 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 35 (65)
..++|..++ +.++.++.|..+++|+-.
T Consensus 6 ~~~d~d~dg~~eLlvGs~D~~IRvf~~~ 33 (111)
T PF14783_consen 6 CLFDFDGDGENELLVGSDDFEIRVFKGD 33 (111)
T ss_pred EEEecCCCCcceEEEecCCcEEEEEeCC
Confidence 344555555 578899999999999754
No 366
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=81.90 E-value=5 Score=20.17 Aligned_cols=29 Identities=24% Similarity=0.134 Sum_probs=22.7
Q ss_pred CCEEEEecCCCcEEEEECCCCceEEEeec
Q psy7061 17 CRLLATTSADQTARIWNTEDFSLVRELGT 45 (65)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 45 (65)
+..+..++.++.+++++..+++.+.....
T Consensus 320 g~~l~~~~~~G~l~~~d~~tG~~~~~~~~ 348 (377)
T TIGR03300 320 GGYLVVGDFEGYLHWLSREDGSFVARLKT 348 (377)
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEEEEEc
Confidence 45677778889999999988888766654
No 367
>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain. All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.
Probab=79.16 E-value=6.7 Score=19.94 Aligned_cols=56 Identities=9% Similarity=0.031 Sum_probs=30.1
Q ss_pred eEEEEECCCCCEEEEecCC-------------------CcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 8 GLHCVFSPDCRLLATTSAD-------------------QTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 8 v~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
...+.|.|++...++-+.. +.+..++.+..+ +..+.. .-.....++|+|+++.+++
T Consensus 126 ~~~l~~gpDG~LYv~~G~~~~~~~~~~~~~~~~~~~~~g~i~r~~pdg~~-~e~~a~-G~rnp~Gl~~d~~G~l~~t 200 (367)
T TIGR02604 126 LNSLAWGPDGWLYFNHGNTLASKVTRPGTSDESRQGLGGGLFRYNPDGGK-LRVVAH-GFQNPYGHSVDSWGDVFFC 200 (367)
T ss_pred ccCceECCCCCEEEecccCCCceeccCCCccCcccccCceEEEEecCCCe-EEEEec-CcCCCccceECCCCCEEEE
Confidence 5567888888765543311 223333443322 223333 2344567888888877653
No 368
>smart00564 PQQ beta-propeller repeat. Beta-propeller repeat occurring in enzymes with pyrrolo-quinoline quinone (PQQ) as cofactor, in Ire1p-like Ser/Thr kinases, and in prokaryotic dehydrogenases.
Probab=79.02 E-value=1.8 Score=13.22 Aligned_cols=22 Identities=14% Similarity=0.083 Sum_probs=15.7
Q ss_pred EEEEecCCCcEEEEECCCCceE
Q psy7061 19 LLATTSADQTARIWNTEDFSLV 40 (65)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~ 40 (65)
.+..+..++.+..++.++++..
T Consensus 8 ~v~~~~~~g~l~a~d~~~G~~~ 29 (33)
T smart00564 8 TVYVGSTDGTLYALDAKTGEIL 29 (33)
T ss_pred EEEEEcCCCEEEEEEcccCcEE
Confidence 4556677788888888776654
No 369
>KOG2247|consensus
Probab=78.04 E-value=6.4 Score=21.52 Aligned_cols=53 Identities=21% Similarity=0.193 Sum_probs=37.0
Q ss_pred EEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 11 CVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
..|++....++.+...+.+.+++-...+.+-.... |..++.+.+|.+.+..+.
T Consensus 123 l~wsKg~~el~ig~~~gn~viynhgtsR~iiv~Gk-h~RRgtq~av~lEd~vil 175 (615)
T KOG2247|consen 123 LAWSKGTPELVIGNNAGNIVIYNHGTSRRIIVMGK-HQRRGTQIAVTLEDYVIL 175 (615)
T ss_pred HhhccCCccccccccccceEEEeccchhhhhhhcc-cccceeEEEecccceeee
Confidence 45677666677777778888887765555444444 678888889888776553
No 370
>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation. It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.
Probab=76.64 E-value=7 Score=18.82 Aligned_cols=58 Identities=9% Similarity=-0.012 Sum_probs=32.2
Q ss_pred ceEEEEECCCCCEEEEecCCCcEEEEE-CCCCceEE-EeeccCC-CcEeEEEEccCCcEEe
Q psy7061 7 YGLHCVFSPDCRLLATTSADQTARIWN-TEDFSLVR-ELGTANQ-RWVWDAAFTLDSKFLL 64 (65)
Q Consensus 7 ~v~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~-~~v~~~~~~~~~~~i~ 64 (65)
.+....|++++........+....++. ...+.... ....... ..|..++++|+|..++
T Consensus 67 ~l~~PS~d~~g~~W~v~~~~~~~~~~~~~~~g~~~~~~v~~~~~~~~I~~l~vSpDG~RvA 127 (253)
T PF10647_consen 67 SLTRPSWDPDGWVWTVDDGSGGVRVVRDSASGTGEPVEVDWPGLRGRITALRVSPDGTRVA 127 (253)
T ss_pred ccccccccCCCCEEEEEcCCCceEEEEecCCCcceeEEecccccCCceEEEEECCCCcEEE
Confidence 455567777766555544445555543 22222211 1221011 2899999999998875
No 371
>KOG1912|consensus
Probab=76.62 E-value=7 Score=22.69 Aligned_cols=43 Identities=12% Similarity=0.145 Sum_probs=31.6
Q ss_pred EEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcE
Q psy7061 19 LLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKF 62 (65)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 62 (65)
.++.|.+.|.+-+++..++.....+.- |...|.++.|-.+.+.
T Consensus 439 LvAvGT~sGTV~vvdvst~~v~~~fsv-ht~~VkgleW~g~ssl 481 (1062)
T KOG1912|consen 439 LVAVGTNSGTVDVVDVSTNAVAASFSV-HTSLVKGLEWLGNSSL 481 (1062)
T ss_pred eEEeecCCceEEEEEecchhhhhhhcc-cccceeeeeeccceeE
Confidence 467788899999999987766666665 7777777777555443
No 372
>TIGR03606 non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH family. PQQ, or pyrroloquinoline-quinone, serves as a cofactor for a number of sugar and alcohol dehydrogenases in a limited number of bacterial species. Most characterized PQQ-dependent enzymes have multiple repeats of a sequence region described by pfam01011 (PQQ enzyme repeat), but this protein family in unusual in lacking that repeat. Below the noise cutoff are related proteins mostly from species that lack PQQ biosynthesis.
Probab=75.70 E-value=10 Score=20.31 Aligned_cols=54 Identities=22% Similarity=0.134 Sum_probs=34.9
Q ss_pred ceEEEEECCCCCEEEEecCCCcEEEEECCCCce--EEEee----ccCCCcEeEEEEccCC
Q psy7061 7 YGLHCVFSPDCRLLATTSADQTARIWNTEDFSL--VRELG----TANQRWVWDAAFTLDS 60 (65)
Q Consensus 7 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~----~~~~~~v~~~~~~~~~ 60 (65)
....+.|.|+++.+++....+.|+.++...+.. +..+. .........++++|+-
T Consensus 31 ~Pw~maflPDG~llVtER~~G~I~~v~~~~~~~~~~~~l~~v~~~~ge~GLlglal~PdF 90 (454)
T TIGR03606 31 KPWALLWGPDNQLWVTERATGKILRVNPETGEVKVVFTLPEIVNDAQHNGLLGLALHPDF 90 (454)
T ss_pred CceEEEEcCCCeEEEEEecCCEEEEEeCCCCceeeeecCCceeccCCCCceeeEEECCCc
Confidence 456788999998777765568888887554322 11111 1135778889999874
No 373
>KOG4190|consensus
Probab=75.34 E-value=4.2 Score=22.49 Aligned_cols=38 Identities=8% Similarity=0.049 Sum_probs=30.2
Q ss_pred ceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEee
Q psy7061 7 YGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELG 44 (65)
Q Consensus 7 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 44 (65)
.+.++...+.|++++.+-.+|.+...|.+++..+..+.
T Consensus 878 ~~R~iaVa~~GN~lAa~LSnGci~~LDaR~G~vINswr 915 (1034)
T KOG4190|consen 878 LTRAIAVADKGNKLAAALSNGCIAILDARNGKVINSWR 915 (1034)
T ss_pred heeEEEeccCcchhhHHhcCCcEEEEecCCCceeccCC
Confidence 45667778888888888888999999999888777544
No 374
>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length. This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.
Probab=74.66 E-value=13 Score=20.94 Aligned_cols=44 Identities=23% Similarity=0.270 Sum_probs=27.1
Q ss_pred EEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEc--cCCcEEe
Q psy7061 21 ATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFT--LDSKFLL 64 (65)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~i~ 64 (65)
+.-.....+.+||...+.....-.....+.|.++.|. |+++.++
T Consensus 45 ~V~~~~~~LtIWD~~~~~lE~~~~f~~~~~I~dLDWtst~d~qsiL 90 (631)
T PF12234_consen 45 VVDSSRSELTIWDTRSGVLEYEESFSEDDPIRDLDWTSTPDGQSIL 90 (631)
T ss_pred EEECCCCEEEEEEcCCcEEEEeeeecCCCceeeceeeecCCCCEEE
Confidence 3334456788999887664333221246788888884 5666554
No 375
>PF01011 PQQ: PQQ enzyme repeat family.; InterPro: IPR002372 Pyrrolo-quinoline quinone (PQQ) is a redox coenzyme, which serves as a cofactor for a number of enzymes (quinoproteins) and particularly for some bacterial dehydrogenases [, ]. A number of bacterial quinoproteins belong to this family. Enzymes in this group have repeats of a beta propeller.; PDB: 1H4I_C 1H4J_E 1W6S_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A 1G72_A ....
Probab=74.59 E-value=3 Score=13.55 Aligned_cols=25 Identities=4% Similarity=0.012 Sum_probs=17.9
Q ss_pred EEEecCCCcEEEEECCCCceEEEee
Q psy7061 20 LATTSADQTARIWNTEDFSLVRELG 44 (65)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~ 44 (65)
+..+..++.++-.|.++++.+=...
T Consensus 3 v~~~~~~g~l~AlD~~TG~~~W~~~ 27 (38)
T PF01011_consen 3 VYVGTPDGYLYALDAKTGKVLWKFQ 27 (38)
T ss_dssp EEEETTTSEEEEEETTTTSEEEEEE
T ss_pred EEEeCCCCEEEEEECCCCCEEEeee
Confidence 3445778888888988887755544
No 376
>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase. These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity
Probab=73.12 E-value=8.8 Score=18.33 Aligned_cols=45 Identities=11% Similarity=-0.000 Sum_probs=25.2
Q ss_pred CCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEE
Q psy7061 16 DCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFL 63 (65)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i 63 (65)
.++.++.|..+| +++++.+.......... ...|..+..-|+...+
T Consensus 6 ~~~~L~vGt~~G-l~~~~~~~~~~~~~i~~--~~~I~ql~vl~~~~~l 50 (275)
T PF00780_consen 6 WGDRLLVGTEDG-LYVYDLSDPSKPTRILK--LSSITQLSVLPELNLL 50 (275)
T ss_pred CCCEEEEEECCC-EEEEEecCCccceeEee--cceEEEEEEecccCEE
Confidence 467777788888 88888833222222221 2236666666554443
No 377
>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases. The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....
Probab=71.87 E-value=11 Score=18.97 Aligned_cols=52 Identities=23% Similarity=0.257 Sum_probs=32.8
Q ss_pred ceEEEEECCCCCEEEEecCCCcEEEEECCCCc--eEEEee---ccCCCcEeEEEEccC
Q psy7061 7 YGLHCVFSPDCRLLATTSADQTARIWNTEDFS--LVRELG---TANQRWVWDAAFTLD 59 (65)
Q Consensus 7 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~---~~~~~~v~~~~~~~~ 59 (65)
....+.|.|+++.+++. ..+.|++++.+... .+.... .........++++|+
T Consensus 3 ~P~~~a~~pdG~l~v~e-~~G~i~~~~~~g~~~~~v~~~~~v~~~~~~gllgia~~p~ 59 (331)
T PF07995_consen 3 NPRSMAFLPDGRLLVAE-RSGRIWVVDKDGSLKTPVADLPEVFADGERGLLGIAFHPD 59 (331)
T ss_dssp SEEEEEEETTSCEEEEE-TTTEEEEEETTTEECEEEEE-TTTBTSTTBSEEEEEE-TT
T ss_pred CceEEEEeCCCcEEEEe-CCceEEEEeCCCcCcceecccccccccccCCcccceeccc
Confidence 45678999998877754 48999999833222 122221 124567789999984
No 378
>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.
Probab=70.77 E-value=15 Score=20.00 Aligned_cols=29 Identities=7% Similarity=0.031 Sum_probs=22.6
Q ss_pred CCEEEEecCCCcEEEEECCCCceEEEeec
Q psy7061 17 CRLLATTSADQTARIWNTEDFSLVRELGT 45 (65)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 45 (65)
+..++.+..++.++.+|.++++.+-....
T Consensus 472 g~lvf~g~~~G~l~a~D~~TGe~lw~~~~ 500 (527)
T TIGR03075 472 GDLVFYGTLEGYFKAFDAKTGEELWKFKT 500 (527)
T ss_pred CcEEEEECCCCeEEEEECCCCCEeEEEeC
Confidence 34566677789999999999988776654
No 379
>PF13570 PQQ_3: PQQ-like domain; PDB: 3HXJ_B 3Q54_A.
Probab=69.54 E-value=4.3 Score=13.22 Aligned_cols=19 Identities=5% Similarity=-0.036 Sum_probs=12.1
Q ss_pred CCEEEEecCCCcEEEEECC
Q psy7061 17 CRLLATTSADQTARIWNTE 35 (65)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~ 35 (65)
+..+..++.++.++.++.+
T Consensus 21 ~g~vyv~~~dg~l~ald~~ 39 (40)
T PF13570_consen 21 GGRVYVGTGDGNLYALDAA 39 (40)
T ss_dssp TSEEEEE-TTSEEEEEETT
T ss_pred CCEEEEEcCCCEEEEEeCC
Confidence 3456666777888777764
No 380
>KOG2114|consensus
Probab=68.94 E-value=22 Score=21.07 Aligned_cols=55 Identities=7% Similarity=-0.011 Sum_probs=33.6
Q ss_pred cceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEE-eeccCCCcEeEEEEccCCc
Q psy7061 6 AYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRE-LGTANQRWVWDAAFTLDSK 61 (65)
Q Consensus 6 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~ 61 (65)
++|+.+.+..++..++-......|.+|.+....+... ... +.....|..+++...
T Consensus 172 ~pITgL~~~~d~~s~lFv~Tt~~V~~y~l~gr~p~~~~ld~-~G~~lnCss~~~~t~ 227 (933)
T KOG2114|consen 172 EPITGLALRSDGKSVLFVATTEQVMLYSLSGRTPSLKVLDN-NGISLNCSSFSDGTY 227 (933)
T ss_pred CCceeeEEecCCceeEEEEecceeEEEEecCCCcceeeecc-CCccceeeecCCCCc
Confidence 4688888877776533333345688888774442233 333 667777777766544
No 381
>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins. Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].
Probab=68.79 E-value=21 Score=20.86 Aligned_cols=25 Identities=8% Similarity=-0.019 Sum_probs=19.1
Q ss_pred CccccceEEEEECCCCCEEEEecCC
Q psy7061 2 AAHRAYGLHCVFSPDCRLLATTSAD 26 (65)
Q Consensus 2 ~~~~~~v~~~~~~~~~~~~~~~~~~ 26 (65)
.+-..+|..++.+.+|+|++.....
T Consensus 615 p~lG~pI~~iDvt~DGkwilaTc~t 639 (794)
T PF08553_consen 615 PGLGDPIIGIDVTADGKWILATCKT 639 (794)
T ss_pred CCCCCCeeEEEecCCCcEEEEeecc
Confidence 3455689999999999998765543
No 382
>COG3391 Uncharacterized conserved protein [Function unknown]
Probab=68.56 E-value=15 Score=18.98 Aligned_cols=55 Identities=11% Similarity=0.126 Sum_probs=36.2
Q ss_pred eEEEEECCCCCEEEEecC---CCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 8 GLHCVFSPDCRLLATTSA---DQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 8 v~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
...+.+.++++.+..+.. +..+.+.+..+...+..... ...+ ..++++|++..+.
T Consensus 118 P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~~~~~~~~v-G~~P-~~~a~~p~g~~vy 175 (381)
T COG3391 118 PVGLAVDPDGKYVYVANAGNGNNTVSVIDAATNKVTATIPV-GNTP-TGVAVDPDGNKVY 175 (381)
T ss_pred CceEEECCCCCEEEEEecccCCceEEEEeCCCCeEEEEEec-CCCc-ceEEECCCCCeEE
Confidence 456778888765543333 57777778777777766433 2233 8888899988653
No 383
>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals. The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.
Probab=67.03 E-value=17 Score=19.11 Aligned_cols=38 Identities=5% Similarity=-0.071 Sum_probs=27.9
Q ss_pred cccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEE
Q psy7061 4 HRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRE 42 (65)
Q Consensus 4 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 42 (65)
.++.|.+++.+. --.++.+.+++.+.+.|++....+..
T Consensus 85 ~~g~vtal~~S~-iGFvaigy~~G~l~viD~RGPavI~~ 122 (395)
T PF08596_consen 85 KQGPVTALKNSD-IGFVAIGYESGSLVVIDLRGPAVIYN 122 (395)
T ss_dssp -S-SEEEEEE-B-TSEEEEEETTSEEEEEETTTTEEEEE
T ss_pred cCCcEeEEecCC-CcEEEEEecCCcEEEEECCCCeEEee
Confidence 357888888863 44688889999999999987766655
No 384
>PF12657 TFIIIC_delta: Transcription factor IIIC subunit delta N-term; InterPro: IPR024761 This entry represents a domain found towards the N terminus of the 90 kDa subunit of transcription factor IIIC (also known as subunit 9 in yeast []). The whole subunit is involved in RNA polymerase III-mediated transcription. It is possible that this N-terminal domain interacts with TFIIIC subunit 8 [].
Probab=65.35 E-value=12 Score=16.87 Aligned_cols=30 Identities=17% Similarity=0.282 Sum_probs=23.3
Q ss_pred ceEEEEECCCCC------EEEEecCCCcEEEEECCC
Q psy7061 7 YGLHCVFSPDCR------LLATTSADQTARIWNTED 36 (65)
Q Consensus 7 ~v~~~~~~~~~~------~~~~~~~~~~~~~~~~~~ 36 (65)
.+..+.|+|.|- .|+....++.+.+|....
T Consensus 87 ~vv~~aWSP~Gl~~~~rClLavLTs~~~l~l~~~~~ 122 (173)
T PF12657_consen 87 QVVSAAWSPSGLGPNGRCLLAVLTSNGRLSLYGPPG 122 (173)
T ss_pred cEEEEEECCCCCCCCCceEEEEEcCCCeEEEEecCC
Confidence 678899999442 477788899999997663
No 385
>KOG1275|consensus
Probab=64.67 E-value=26 Score=21.10 Aligned_cols=30 Identities=13% Similarity=0.113 Sum_probs=25.7
Q ss_pred cceEEEEECCCCCEEEEecCCCcEEEEECC
Q psy7061 6 AYGLHCVFSPDCRLLATTSADQTARIWNTE 35 (65)
Q Consensus 6 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 35 (65)
..+...++++.+..++.+..++.+.+|...
T Consensus 313 s~i~~fDiSsn~~alafgd~~g~v~~wa~~ 342 (1118)
T KOG1275|consen 313 SGISAFDISSNGDALAFGDHEGHVNLWADR 342 (1118)
T ss_pred CcceeEEecCCCceEEEecccCcEeeecCC
Confidence 347888999999999999999999999743
No 386
>PF01731 Arylesterase: Arylesterase; InterPro: IPR002640 The serum paraoxonases/arylesterases are enzymes that catalyse the hydrolysis of the toxic metabolites of a variety of organophosphorus insecticides. The enzymes hydrolyse a broad spectrum of organophosphate substrates, including paraoxon and a number of aromatic carboxylic acid esters (e.g., phenyl acetate), and hence confer resistance to organophosphate toxicity []. Mammals have 3 distinct paraoxonase types, termed PON1-3 [, ]. In mice and humans, the PON genes are found on the same chromosome in close proximity. PON activity has been found in variety of tissues, with highest levels in liver and serum - the source of serum PON is thought to be the liver. Unlike mammals, fish and avian species lack paraoxonase activity. Human and rabbit PONs appear to have two distinct Ca2+ binding sites, one required for stability and one required for catalytic activity. The Ca2+ dependency of PONs suggests a mechanism of hydrolysis where Ca2+ acts as the electrophillic catalyst, like that proposed for phospholipase A2. The paraoxonase enzymes, PON1 and PON3, are high density lipoprotein (HDL)- associated proteins capable of preventing oxidative modification of low density lipoproteins (LPL) []. Although PON2 has oxidative properties, the enzyme does not associate with HDL. Within a given species, PON1, PON2 and PON3 share ~60% amino acid sequence identity, whereas between mammalian species particular PONs (1,2 or 3) share 79-90% identity at the amino acid level. Human PON1 and PON3 share numerous conserved phosphorylation and N-glycosylation sites; however, it is not known whether the PON proteins are modified at these sites, or whether modification at these sites is required for activity in vivo []. This family consists of arylesterases (Also known as serum paraoxonase) 3.1.1.2 from EC. These enzymes hydrolyse organophosphorus esters such as paraoxon and are found in the liver and blood. They confer resistance to organophosphate toxicity []. Human arylesterase (PON1) P27169 from SWISSPROT is associated with HDL and may protect against LDL oxidation [].; GO: 0004064 arylesterase activity
Probab=61.62 E-value=11 Score=15.17 Aligned_cols=26 Identities=19% Similarity=0.350 Sum_probs=13.4
Q ss_pred EEEEECCCCCEE-EEecCCCcEEEEEC
Q psy7061 9 LHCVFSPDCRLL-ATTSADQTARIWNT 34 (65)
Q Consensus 9 ~~~~~~~~~~~~-~~~~~~~~~~~~~~ 34 (65)
..+.++|+++.+ ++....+.+.++..
T Consensus 57 NGI~~s~~~k~lyVa~~~~~~I~vy~~ 83 (86)
T PF01731_consen 57 NGIAISPDKKYLYVASSLAHSIHVYKR 83 (86)
T ss_pred ceEEEcCCCCEEEEEeccCCeEEEEEe
Confidence 345566665544 33334555665554
No 387
>KOG1916|consensus
Probab=60.41 E-value=14 Score=22.10 Aligned_cols=24 Identities=21% Similarity=0.317 Sum_probs=20.6
Q ss_pred EECCCCCEEEEecCCCcEEEEECC
Q psy7061 12 VFSPDCRLLATTSADQTARIWNTE 35 (65)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~ 35 (65)
..+|||..++....||.+.+|.+.
T Consensus 242 ~lSpDGtv~a~a~~dG~v~f~Qiy 265 (1283)
T KOG1916|consen 242 SLSPDGTVFAWAISDGSVGFYQIY 265 (1283)
T ss_pred eeCCCCcEEEEeecCCccceeeee
Confidence 478999999999999999888765
No 388
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=59.99 E-value=17 Score=16.77 Aligned_cols=23 Identities=17% Similarity=0.018 Sum_probs=12.5
Q ss_pred CCEEEEecCCCcEEEEECCCCce
Q psy7061 17 CRLLATTSADQTARIWNTEDFSL 39 (65)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~ 39 (65)
+..+.....++.+..+++.+++.
T Consensus 212 ~~~l~~~~~~~~l~~~d~~tG~~ 234 (238)
T PF13360_consen 212 GGTLYVTSSDGRLYALDLKTGKV 234 (238)
T ss_dssp CTEEEEEETTTEEEEEETTTTEE
T ss_pred CCEEEEEeCCCEEEEEECCCCCE
Confidence 33444444566666666666554
No 389
>PF08954 DUF1900: Domain of unknown function (DUF1900); InterPro: IPR015049 This domain is predominantly found in the structural protein coronin, and is duplicated in some sequences. It has no known function []. ; PDB: 2B4E_A 2AQ5_A.
Probab=55.92 E-value=19 Score=15.94 Aligned_cols=31 Identities=19% Similarity=0.199 Sum_probs=18.0
Q ss_pred ceEEEEECCCCCE-EEEecCCCcEEEEECCCC
Q psy7061 7 YGLHCVFSPDCRL-LATTSADQTARIWNTEDF 37 (65)
Q Consensus 7 ~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 37 (65)
.+...-|.++.+. .+++..|+.++.|.+...
T Consensus 12 g~L~P~yD~dt~llyl~gKGD~~ir~yEv~~~ 43 (136)
T PF08954_consen 12 GVLMPFYDEDTNLLYLAGKGDGNIRYYEVSDE 43 (136)
T ss_dssp S-EEEEE-TTT-EEEEEETT-S-EEEEEE-SS
T ss_pred ceeEeeEcCCCCEEEEEeccCcEEEEEEEcCC
Confidence 4555667777765 466777889999998765
No 390
>KOG3616|consensus
Probab=52.87 E-value=49 Score=19.88 Aligned_cols=30 Identities=10% Similarity=0.102 Sum_probs=23.9
Q ss_pred ceEEEEECCCCCEEEEecCCCcEEEEECCC
Q psy7061 7 YGLHCVFSPDCRLLATTSADQTARIWNTED 36 (65)
Q Consensus 7 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 36 (65)
.++.+.-+|.++.++.+..|+.+.+|+...
T Consensus 16 ~~~aiqshp~~~s~v~~~~d~si~lfn~~~ 45 (1636)
T KOG3616|consen 16 FTTAIQSHPGGQSFVLAHQDGSIILFNFIP 45 (1636)
T ss_pred eeeeeeecCCCceEEEEecCCcEEEEeecc
Confidence 456666678888899999999999987653
No 391
>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases. The alignment model contains an 8-bladed beta-propeller.
Probab=52.30 E-value=37 Score=18.32 Aligned_cols=29 Identities=17% Similarity=0.134 Sum_probs=21.9
Q ss_pred CCEEEEecCCCcEEEEECCCCceEEEeec
Q psy7061 17 CRLLATTSADQTARIWNTEDFSLVRELGT 45 (65)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 45 (65)
+..+..++.++.++.++.++++.+-....
T Consensus 406 g~~v~~g~~dG~l~ald~~tG~~lW~~~~ 434 (488)
T cd00216 406 GNLVFAGAADGYFRAFDATTGKELWKFRT 434 (488)
T ss_pred CCeEEEECCCCeEEEEECCCCceeeEEEC
Confidence 45566777889999999998887665543
No 392
>KOG1520|consensus
Probab=52.05 E-value=20 Score=18.88 Aligned_cols=16 Identities=25% Similarity=0.353 Sum_probs=10.5
Q ss_pred CcEeEEEEccCCcEEe
Q psy7061 49 RWVWDAAFTLDSKFLL 64 (65)
Q Consensus 49 ~~v~~~~~~~~~~~i~ 64 (65)
...+.++.||++.+++
T Consensus 219 ~F~NGlaLS~d~sfvl 234 (376)
T KOG1520|consen 219 YFPNGLALSPDGSFVL 234 (376)
T ss_pred cccccccCCCCCCEEE
Confidence 3345677788877664
No 393
>PF10636 hemP: Hemin uptake protein hemP; InterPro: IPR019600 This entry represents bacterial proteins that are involved in the uptake of the iron source hemin []. ; PDB: 2JRA_B 2LOJ_A.
Probab=51.58 E-value=12 Score=12.65 Aligned_cols=19 Identities=21% Similarity=0.329 Sum_probs=12.6
Q ss_pred CCCcEeEEEEccCCcEEeC
Q psy7061 47 NQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 47 ~~~~v~~~~~~~~~~~i~s 65 (65)
|.+....+.....++.|.|
T Consensus 19 H~g~~Y~LR~Tr~gKLILT 37 (38)
T PF10636_consen 19 HGGQIYRLRITRQGKLILT 37 (38)
T ss_dssp ETTEEEEEEEETTTEEEEE
T ss_pred eCCeEEEeeEccCCcEEEc
Confidence 5666677777777776653
No 394
>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea. The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.
Probab=50.47 E-value=42 Score=18.38 Aligned_cols=31 Identities=19% Similarity=0.164 Sum_probs=19.5
Q ss_pred ceEEEEECCCCCEE-EEecCCCcEEEEECCCC
Q psy7061 7 YGLHCVFSPDCRLL-ATTSADQTARIWNTEDF 37 (65)
Q Consensus 7 ~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 37 (65)
-++.+..+.|.+++ +++-..+.++.||+.+.
T Consensus 313 LitDI~iSlDDrfLYvs~W~~GdvrqYDISDP 344 (461)
T PF05694_consen 313 LITDILISLDDRFLYVSNWLHGDVRQYDISDP 344 (461)
T ss_dssp ----EEE-TTS-EEEEEETTTTEEEEEE-SST
T ss_pred ceEeEEEccCCCEEEEEcccCCcEEEEecCCC
Confidence 46788889988865 66778999999999853
No 395
>COG0512 PabA Anthranilate/para-aminobenzoate synthases component II [Amino acid transport and metabolism / Coenzyme metabolism]
Probab=50.08 E-value=29 Score=16.47 Aligned_cols=21 Identities=10% Similarity=0.245 Sum_probs=15.2
Q ss_pred eEEEeeccCCCcEeEEEEccCC
Q psy7061 39 LVRELGTANQRWVWDAAFTLDS 60 (65)
Q Consensus 39 ~~~~~~~~~~~~v~~~~~~~~~ 60 (65)
.+..+.. ...++..++|+|.+
T Consensus 154 ~IMai~h-~~~pi~gvQFHPES 174 (191)
T COG0512 154 VIMAVRH-KKLPIYGVQFHPES 174 (191)
T ss_pred EEEEEee-CCCCEEEEecCCcc
Confidence 4555554 56788999999975
No 396
>PF10214 Rrn6: RNA polymerase I-specific transcription-initiation factor; InterPro: IPR019350 RNA polymerase I-specific transcription-initiation factor Rrn6 and Rrn7 represent components of a multisubunit transcription factor essential for the initiation of rDNA transcription by Pol I []. These proteins are found in fungi.
Probab=48.83 E-value=53 Score=19.11 Aligned_cols=28 Identities=21% Similarity=0.419 Sum_probs=23.9
Q ss_pred ceEEEEECC-CCCEEEEecCCCcEEEEEC
Q psy7061 7 YGLHCVFSP-DCRLLATTSADQTARIWNT 34 (65)
Q Consensus 7 ~v~~~~~~~-~~~~~~~~~~~~~~~~~~~ 34 (65)
....++|+| +...++.....|.-.+|++
T Consensus 147 ~~aDv~FnP~~~~q~AiVD~~G~Wsvw~i 175 (765)
T PF10214_consen 147 PHADVAFNPWDQRQFAIVDEKGNWSVWDI 175 (765)
T ss_pred ccceEEeccCccceEEEEeccCcEEEEEe
Confidence 567889998 4568999999999999999
No 397
>PF10395 Utp8: Utp8 family; InterPro: IPR018843 Utp8 is an essential component of the nuclear tRNA export machinery in Saccharomyces cerevisiae (Baker's yeast). It is a tRNA binding protein that acts at a step between tRNA maturation /aminoacylation, and translocation of the tRNA across the nuclear pore complex [].
Probab=47.57 E-value=55 Score=18.97 Aligned_cols=29 Identities=14% Similarity=0.228 Sum_probs=25.7
Q ss_pred cceEEEEECCCCCEEEEecCCCcEEEEEC
Q psy7061 6 AYGLHCVFSPDCRLLATTSADQTARIWNT 34 (65)
Q Consensus 6 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 34 (65)
..+..+.+.++++.+...-.+|.+.+|+.
T Consensus 130 ~kvv~Ik~~~~~~~I~vvl~nG~i~~~d~ 158 (670)
T PF10395_consen 130 DKVVGIKFSSDGKIIYVVLENGSIQIYDF 158 (670)
T ss_pred cceEEEEEecCCCEEEEEEcCCcEEEEec
Confidence 46888999988888888899999999998
No 398
>PF08801 Nucleoporin_N: Nup133 N terminal like; InterPro: IPR014908 Nucleoporins are the main components of the nuclear pore complex (NPC) in eukaryotic cells, and mediate bidirectional nucleocytoplasmic transport, especially of mRNA and proteins. RNA undergoing nuclear export first encounters the basket of the nuclear pore and many nucleoporins are accessible on the basket side of the pore [, ]. This entry represents the N-terminal of Nucleoprotein which forms a seven-bladed beta propeller structure []. ; PDB: 1XKS_A.
Probab=47.52 E-value=42 Score=17.60 Aligned_cols=30 Identities=23% Similarity=0.444 Sum_probs=23.4
Q ss_pred ceEEEEECCCCCEEEEecCCCcEEEEECCC
Q psy7061 7 YGLHCVFSPDCRLLATTSADQTARIWNTED 36 (65)
Q Consensus 7 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 36 (65)
.+..+...+..+.+.+...++.+.+|++..
T Consensus 191 ~I~~v~~d~~r~~ly~l~~~~~Iq~w~l~~ 220 (422)
T PF08801_consen 191 KIVQVAVDPSRRLLYTLTSDGSIQVWDLGP 220 (422)
T ss_dssp -EEEEEEETTTTEEEEEESSE-EEEEEE-S
T ss_pred ceeeEEecCCcCEEEEEeCCCcEEEEEEeC
Confidence 488888888778888889999999999974
No 399
>TIGR02608 delta_60_rpt delta-60 repeat domain. This domain occurs in tandem repeats, as many as 13, in proteins from Bdellovibrio bacteriovorus, Azotobacter vinelandii, Geobacter sulfurreducens, Pirellula sp. 1, Myxococcus xanthus, and others, many of which are Deltaproteobacteria. The periodicity of the repeat ranges from about 57 to 61 amino acids, and a core region of about 54 is represented by this model and seed alignment.
Probab=46.25 E-value=19 Score=13.21 Aligned_cols=17 Identities=12% Similarity=0.206 Sum_probs=13.4
Q ss_pred eEEEEECCCCCEEEEec
Q psy7061 8 GLHCVFSPDCRLLATTS 24 (65)
Q Consensus 8 v~~~~~~~~~~~~~~~~ 24 (65)
+..+...|+++.++.+.
T Consensus 3 ~~~~~~q~DGkIlv~G~ 19 (55)
T TIGR02608 3 AYAVAVQSDGKILVAGY 19 (55)
T ss_pred eEEEEECCCCcEEEEEE
Confidence 56778889999888775
No 400
>PRK13684 Ycf48-like protein; Provisional
Probab=46.07 E-value=42 Score=17.14 Aligned_cols=56 Identities=14% Similarity=0.029 Sum_probs=25.1
Q ss_pred cceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcE
Q psy7061 6 AYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKF 62 (65)
Q Consensus 6 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 62 (65)
+.+..+.+.+++..++.+. .+.+..-.-+.++............+..+.+.++++.
T Consensus 173 g~~~~i~~~~~g~~v~~g~-~G~i~~s~~~gg~tW~~~~~~~~~~l~~i~~~~~g~~ 228 (334)
T PRK13684 173 GVVRNLRRSPDGKYVAVSS-RGNFYSTWEPGQTAWTPHQRNSSRRLQSMGFQPDGNL 228 (334)
T ss_pred ceEEEEEECCCCeEEEEeC-CceEEEEcCCCCCeEEEeeCCCcccceeeeEcCCCCE
Confidence 3466777777766555443 3333221111222222222113345566666665554
No 401
>PF12341 DUF3639: Protein of unknown function (DUF3639) ; InterPro: IPR022100 This domain family is found in eukaryotes, and is approximately 30 amino acids in length. The family is found in association with PF00400 from PFAM. There are two completely conserved residues (E and R) that may be functionally important.
Probab=45.76 E-value=14 Score=11.46 Aligned_cols=24 Identities=13% Similarity=-0.032 Sum_probs=14.6
Q ss_pred ceEEEEECCCCCEEEEecCCCcEEEE
Q psy7061 7 YGLHCVFSPDCRLLATTSADQTARIW 32 (65)
Q Consensus 7 ~v~~~~~~~~~~~~~~~~~~~~~~~~ 32 (65)
.|.++... ..+++.+...+.+++|
T Consensus 3 ~i~aia~g--~~~vavaTS~~~lRif 26 (27)
T PF12341_consen 3 EIEAIAAG--DSWVAVATSAGYLRIF 26 (27)
T ss_pred eEEEEEcc--CCEEEEEeCCCeEEec
Confidence 45555543 3567666666777765
No 402
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=45.19 E-value=62 Score=18.82 Aligned_cols=53 Identities=23% Similarity=0.072 Sum_probs=28.1
Q ss_pred eEEEEECCCCCEEEEec-----CCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEE
Q psy7061 8 GLHCVFSPDCRLLATTS-----ADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFL 63 (65)
Q Consensus 8 v~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i 63 (65)
+-.++.+|+.+.++-+- +...+++.++.++..+.... .+..-.++|.++++.+
T Consensus 131 Lg~~~~s~D~~~la~s~D~~G~e~y~lr~kdL~tg~~~~d~i---~~~~~~~~Wa~d~~~l 188 (682)
T COG1770 131 LGAASISPDHNLLAYSVDVLGDEQYTLRFKDLATGEELPDEI---TNTSGSFAWAADGKTL 188 (682)
T ss_pred eeeeeeCCCCceEEEEEecccccEEEEEEEecccccccchhh---cccccceEEecCCCeE
Confidence 44566777777654432 22346666666655432222 1234566677666554
No 403
>PF13449 Phytase-like: Esterase-like activity of phytase
Probab=44.80 E-value=44 Score=16.97 Aligned_cols=56 Identities=16% Similarity=0.169 Sum_probs=33.4
Q ss_pred ceEEEEECCCCCEEEEecCC------CcEEEEECCCCceEEEee-------------c-cCCCcEeEEEEccCCcEE
Q psy7061 7 YGLHCVFSPDCRLLATTSAD------QTARIWNTEDFSLVRELG-------------T-ANQRWVWDAAFTLDSKFL 63 (65)
Q Consensus 7 ~v~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~-------------~-~~~~~v~~~~~~~~~~~i 63 (65)
+...+.+.+++..+++.-.+ ..|..++.+ ++.+..+. . ..+...-.++++|+++.+
T Consensus 86 D~Egi~~~~~g~~~is~E~~~~~~~~p~I~~~~~~-G~~~~~~~vP~~~~~~~~~~~~~~~N~G~E~la~~~dG~~l 161 (326)
T PF13449_consen 86 DPEGIAVPPDGSFWISSEGGRTGGIPPRIRRFDLD-GRVIRRFPVPAAFLPDANGTSGRRNNRGFEGLAVSPDGRTL 161 (326)
T ss_pred ChhHeEEecCCCEEEEeCCccCCCCCCEEEEECCC-CcccceEccccccccccCccccccCCCCeEEEEECCCCCEE
Confidence 34456665567766665555 566666655 43322221 0 135667789999999854
No 404
>COG5169 HSF1 Heat shock transcription factor [Transcription]
Probab=44.80 E-value=24 Score=17.80 Aligned_cols=15 Identities=7% Similarity=0.138 Sum_probs=10.5
Q ss_pred cEeEEEEccCCcEEe
Q psy7061 50 WVWDAAFTLDSKFLL 64 (65)
Q Consensus 50 ~v~~~~~~~~~~~i~ 64 (65)
...-+.|+|+|+.++
T Consensus 26 ~~k~I~Ws~~G~sfv 40 (282)
T COG5169 26 YYKLIQWSPDGRSFV 40 (282)
T ss_pred cCCceEECCCCCEEE
Confidence 345678899887664
No 405
>PF02870 Methyltransf_1N: 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain; InterPro: IPR008332 Synonym(s): 6-O-methylguanine-DNA methyltransferase, O-6-methylguanine-DNA-alkyltransferase The repair of DNA containing O6-alkylated guanine is carried out by DNA-[protein]-cysteine S-methyltransferase (2.1.1.63 from EC). The major mutagenic and carcinogenic effect of methylating agents in DNA is the formation of O6-alkylguanine. The alkyl group at the O-6 position is transferred to a cysteine residue in the enzyme []. This is a suicide reaction since the enzyme is irreversibly inactivated and the methylated protein accumulates as a dead-end product. Most, but not all of the methyltransferases are also able to repair O-4-methylthymine. DNA-[protein]-cysteine S-methyltransferases are widely distributed and are found in various prokaryotic and eukaryotic sources []. This group of proteins are characterised by having an N-terminal ribonuclease-like domain associated with 6-O-methylguanine DNA methyltransferase activity (IPR001497 from INTERPRO).; GO: 0003908 methylated-DNA-[protein]-cysteine S-methyltransferase activity, 0006281 DNA repair; PDB: 1SFE_A 1T39_B 1T38_A 1EH7_A 1EH6_A 1YFH_C 1EH8_A 1QNT_A.
Probab=44.20 E-value=22 Score=13.46 Aligned_cols=20 Identities=30% Similarity=0.111 Sum_probs=14.4
Q ss_pred CCCCCEEEEecCCCcEEEEE
Q psy7061 14 SPDCRLLATTSADQTARIWN 33 (65)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~ 33 (65)
+|-|..++.+++.+...++-
T Consensus 9 sPlG~l~l~a~e~gL~~i~f 28 (77)
T PF02870_consen 9 SPLGPLLLAASEKGLCGIDF 28 (77)
T ss_dssp ETTEEEEEEEETTCEEEEEE
T ss_pred CCCeEEEEEEECCeEEEEEE
Confidence 56778888888888666653
No 406
>KOG1008|consensus
Probab=43.91 E-value=24 Score=20.29 Aligned_cols=54 Identities=13% Similarity=0.266 Sum_probs=31.0
Q ss_pred ceEEEEECC-CCCEEEEecCCCcEEEEE-CCCCc-eEEEeec---cCCCcEeEEEEccCCc
Q psy7061 7 YGLHCVFSP-DCRLLATTSADQTARIWN-TEDFS-LVRELGT---ANQRWVWDAAFTLDSK 61 (65)
Q Consensus 7 ~v~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~---~~~~~v~~~~~~~~~~ 61 (65)
.+..+...| ...++++.. ++.+.+|| ....+ .+..+.. .....+..++|.|...
T Consensus 197 ~vqG~tVdp~~~nY~cs~~-dg~iAiwD~~rnienpl~~i~~~~N~~~~~l~~~aycPtrt 256 (783)
T KOG1008|consen 197 YVQGITVDPFSPNYFCSNS-DGDIAIWDTYRNIENPLQIILRNENKKPKQLFALAYCPTRT 256 (783)
T ss_pred hcccceecCCCCCceeccc-cCceeeccchhhhccHHHHHhhCCCCcccceeeEEeccCCc
Confidence 345566677 556666544 89999999 33322 2222221 1223588889988643
No 407
>PF12768 Rax2: Cortical protein marker for cell polarity
Probab=42.96 E-value=46 Score=16.77 Aligned_cols=35 Identities=9% Similarity=0.015 Sum_probs=17.6
Q ss_pred CCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCc
Q psy7061 26 DQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSK 61 (65)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 61 (65)
..-+++|+.....-...-.+ -.+.|..+.|..+.+
T Consensus 15 C~~lC~yd~~~~qW~~~g~~-i~G~V~~l~~~~~~~ 49 (281)
T PF12768_consen 15 CPGLCLYDTDNSQWSSPGNG-ISGTVTDLQWASNNQ 49 (281)
T ss_pred CCEEEEEECCCCEeecCCCC-ceEEEEEEEEecCCE
Confidence 34577777664433222222 345666666654333
No 408
>PF14269 Arylsulfotran_2: Arylsulfotransferase (ASST)
Probab=42.24 E-value=48 Score=16.76 Aligned_cols=38 Identities=13% Similarity=0.018 Sum_probs=28.8
Q ss_pred eEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeec
Q psy7061 8 GLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGT 45 (65)
Q Consensus 8 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 45 (65)
+.++....+|.++++...-..+.+.+.++++.+=.+.+
T Consensus 146 iNsV~~~~~G~yLiS~R~~~~i~~I~~~tG~I~W~lgG 183 (299)
T PF14269_consen 146 INSVDKDDDGDYLISSRNTSTIYKIDPSTGKIIWRLGG 183 (299)
T ss_pred eeeeeecCCccEEEEecccCEEEEEECCCCcEEEEeCC
Confidence 45666677888999888888888888888776666554
No 409
>KOG2444|consensus
Probab=41.77 E-value=47 Score=16.45 Aligned_cols=28 Identities=18% Similarity=0.173 Sum_probs=19.5
Q ss_pred CCEEEEecCCCcEEEEECCCCceEEEee
Q psy7061 17 CRLLATTSADQTARIWNTEDFSLVRELG 44 (65)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 44 (65)
+.+.+++..++.++.|++...+......
T Consensus 114 ~~~~c~~~~dg~ir~~n~~p~k~~g~~g 141 (238)
T KOG2444|consen 114 SSLGCVGAQDGRIRACNIKPNKVLGYVG 141 (238)
T ss_pred cceeEEeccCCceeeeccccCceeeeec
Confidence 3467778888999999887665544333
No 410
>smart00415 HSF heat shock factor.
Probab=40.98 E-value=31 Score=14.26 Aligned_cols=12 Identities=8% Similarity=-0.022 Sum_probs=8.1
Q ss_pred eEEEEccCCcEE
Q psy7061 52 WDAAFTLDSKFL 63 (65)
Q Consensus 52 ~~~~~~~~~~~i 63 (65)
..+.|+++|+.+
T Consensus 20 ~iI~W~~~G~~f 31 (105)
T smart00415 20 KIISWSPSGKSF 31 (105)
T ss_pred CEEEECCCCCEE
Confidence 357788877654
No 411
>cd03444 Thioesterase_II_repeat1 Thioesterase II (TEII) is thought to regenerate misprimed nonribosomal peptide synthetases (NRPSs) as well as modular polyketide synthases (PKSs) by hydrolyzing acetyl groups bound to the peptidyl carrier protein (PCP) and acyl carrier protein (ACP) domains, respectively. TEII has two tandem asymmetric hot dog folds that are structurally similar to one found in PaaI thioesterase, 4-hydroxybenzoyl-CoA thioesterase (4HBT) and beta-hydroxydecanoyl-ACP dehydratase and thus, the TEII monomer is equivalent to the homodimeric form of the latter three enzymes. Human TEII is expressed in T cells and has been shown to bind the product of the HIV-1 Nef gene.
Probab=39.56 E-value=33 Score=14.08 Aligned_cols=13 Identities=38% Similarity=0.509 Sum_probs=6.4
Q ss_pred EEEEECCCCceEEE
Q psy7061 29 ARIWNTEDFSLVRE 42 (65)
Q Consensus 29 ~~~~~~~~~~~~~~ 42 (65)
.++|+. +|+.+.+
T Consensus 85 ~~l~~~-~G~LvAs 97 (104)
T cd03444 85 GRIFTR-DGELVAS 97 (104)
T ss_pred EEEECC-CCCEEEE
Confidence 456664 3454433
No 412
>KOG1983|consensus
Probab=38.37 E-value=96 Score=19.06 Aligned_cols=26 Identities=19% Similarity=0.302 Sum_probs=21.7
Q ss_pred CCCCCEEEEecCCCcEEEEECCCCce
Q psy7061 14 SPDCRLLATTSADQTARIWNTEDFSL 39 (65)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 39 (65)
..++..+++...|+.+.+|+...+..
T Consensus 243 ~~~~~~~v~~h~Dgs~~fWd~s~g~~ 268 (993)
T KOG1983|consen 243 SRDGSHFVSYHTDGSYAFWDVSSGKL 268 (993)
T ss_pred ccCCceEEEEEecCCEEeeecCCCce
Confidence 45678899999999999999987644
No 413
>KOG4469|consensus
Probab=36.43 E-value=58 Score=15.99 Aligned_cols=15 Identities=13% Similarity=0.273 Sum_probs=8.9
Q ss_pred ecCCCcEEEEECCCC
Q psy7061 23 TSADQTARIWNTEDF 37 (65)
Q Consensus 23 ~~~~~~~~~~~~~~~ 37 (65)
+.....+.+|++.++
T Consensus 205 atscrslhlynisdg 219 (391)
T KOG4469|consen 205 ATSCRSLHLYNISDG 219 (391)
T ss_pred hcccceeeeEeecCC
Confidence 344456777777654
No 414
>PF00447 HSF_DNA-bind: HSF-type DNA-binding; InterPro: IPR000232 Heat shock factor (HSF) is a transcriptional activator of heat shock genes []: it binds specifically to heat shock promoter elements, which are palindromic sequences rich with repetitive purine and pyrimidine motifs []. Under normal conditions, HSF is a homo-trimeric cytoplasmic protein, but heat shock activation results in relocalisation to the nucleus []. Each HSF monomer contains one C-terminal and three N-terminal leucine zipper repeats []. Point mutations in these regions result in disruption of cellular localisation, rendering the protein constitutively nuclear []. Two sequences flanking the N-terminal zippers fit the consensus of a bi- partite nuclear localisation signal (NLS). Interaction between the N- and C-terminal zippers may result in a structure that masks the NLS sequences: following activation of HSF, these may then be unmasked, resulting in relocalisation of the protein to the nucleus []. The DNA-binding component of HSF lies to the N terminus of the first NLS region, and is referred to as the HSF domain.; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0043565 sequence-specific DNA binding, 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus; PDB: 1FBQ_B 1FYL_B 1FBS_A 1FYM_B 3HTS_B 2HTS_A 3HSF_A 1FBU_B 1FYK_A 2LDU_A ....
Probab=36.11 E-value=35 Score=13.94 Aligned_cols=11 Identities=9% Similarity=0.075 Sum_probs=7.0
Q ss_pred EEEEccCCcEE
Q psy7061 53 DAAFTLDSKFL 63 (65)
Q Consensus 53 ~~~~~~~~~~i 63 (65)
.+.|+++|..+
T Consensus 18 ~I~W~~~G~~f 28 (103)
T PF00447_consen 18 IIRWSPDGDSF 28 (103)
T ss_dssp TCEECTTSSEE
T ss_pred EEEEeCCCCEE
Confidence 46677776654
No 415
>PF14727 PHTB1_N: PTHB1 N-terminus
Probab=36.03 E-value=75 Score=17.20 Aligned_cols=20 Identities=15% Similarity=0.197 Sum_probs=16.8
Q ss_pred CCEEEEecCCCcEEEEECCC
Q psy7061 17 CRLLATTSADQTARIWNTED 36 (65)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~ 36 (65)
..+++.|+..|.+++|....
T Consensus 37 ~d~IivGS~~G~LrIy~P~~ 56 (418)
T PF14727_consen 37 SDKIIVGSYSGILRIYDPSG 56 (418)
T ss_pred ccEEEEeccccEEEEEccCC
Confidence 35899999999999998763
No 416
>PF14339 DUF4394: Domain of unknown function (DUF4394)
Probab=35.07 E-value=63 Score=16.01 Aligned_cols=55 Identities=13% Similarity=0.037 Sum_probs=33.6
Q ss_pred cceEEEEECCC-CCEEEEecCCCcEEEEECCCCceEEE----eeccCCCcEeEEEEccCCc
Q psy7061 6 AYGLHCVFSPD-CRLLATTSADQTARIWNTEDFSLVRE----LGTANQRWVWDAAFTLDSK 61 (65)
Q Consensus 6 ~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~v~~~~~~~~~~ 61 (65)
+.+..++|.|. ++.+.. +..+.++..+..++..... +...-......+.|+|.-.
T Consensus 27 e~l~GID~Rpa~G~LYgl-~~~g~lYtIn~~tG~aT~vg~s~~~~al~g~~~gvDFNP~aD 86 (236)
T PF14339_consen 27 ESLVGIDFRPANGQLYGL-GSTGRLYTINPATGAATPVGASPLTVALSGTAFGVDFNPAAD 86 (236)
T ss_pred CeEEEEEeecCCCCEEEE-eCCCcEEEEECCCCeEEEeecccccccccCceEEEecCcccC
Confidence 46888999994 555544 5567888888887765333 1111223356677777543
No 417
>KOG3950|consensus
Probab=34.93 E-value=66 Score=16.19 Aligned_cols=15 Identities=13% Similarity=0.335 Sum_probs=8.7
Q ss_pred eEEEEECCCCCEEEE
Q psy7061 8 GLHCVFSPDCRLLAT 22 (65)
Q Consensus 8 v~~~~~~~~~~~~~~ 22 (65)
++.++.+|+|+.+++
T Consensus 262 v~eiCvC~nGkLfLs 276 (292)
T KOG3950|consen 262 VFEICVCPNGKLFLS 276 (292)
T ss_pred EEEEEEecCCcEEEe
Confidence 555666666665553
No 418
>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.
Probab=34.91 E-value=1e+02 Score=18.32 Aligned_cols=28 Identities=11% Similarity=0.056 Sum_probs=20.4
Q ss_pred CCEEEE-ecCCCcEEEEECCCCceEEEee
Q psy7061 17 CRLLAT-TSADQTARIWNTEDFSLVRELG 44 (65)
Q Consensus 17 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 44 (65)
+..++. +..++.++.+|.++++.+=...
T Consensus 691 gglvF~~gt~d~~l~A~D~~tGk~lW~~~ 719 (764)
T TIGR03074 691 GGLVFIGATQDNYLRAYDLSTGKELWKAR 719 (764)
T ss_pred CCEEEEEeCCCCEEEEEECCCCceeeEee
Confidence 445554 6789999999999888755544
No 419
>PF11635 Med16: Mediator complex subunit 16; InterPro: IPR021665 Mediator is a large complex of up to 33 proteins that is conserved from plants through fungi to humans - the number and representation of individual subunits varying with species [],[]. It is arranged into four different sections, a core, a head, a tail and a kinase-activity part, and the number of subunits within each of these is what varies with species. Overall, Mediator regulates the transcriptional activity of RNA polymerase II but it would appear that each of the four different sections has a slightly different function. Med16 is one of the subunits of the Tail portion of the Mediator complex and is required for lipopolysaccharide gene-expression []. Several members including the human protein, Q9Y2X0 from SWISSPROT, have one or more WD40 domains on them, PF00400 from PFAM.
Probab=34.15 E-value=1e+02 Score=18.14 Aligned_cols=34 Identities=6% Similarity=-0.083 Sum_probs=24.5
Q ss_pred cceEEEEECCCCCEEEEecCCCcEEEEECCCCce
Q psy7061 6 AYGLHCVFSPDCRLLATTSADQTARIWNTEDFSL 39 (65)
Q Consensus 6 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 39 (65)
..|..+....-+..++....||.|.+++..+-+.
T Consensus 260 ~~V~si~~~~~~~~v~~~~~DGsI~~~dr~t~~~ 293 (753)
T PF11635_consen 260 KRVVSITSPELDIVVAFAFSDGSIEFRDRNTMKE 293 (753)
T ss_pred CeEEEEEecccCcEEEEEEcCCeEEEEecCcchh
Confidence 3466666555566788888999999998775533
No 420
>PRK10183 hypothetical protein; Provisional
Probab=33.90 E-value=35 Score=12.73 Aligned_cols=19 Identities=26% Similarity=0.146 Sum_probs=14.0
Q ss_pred CCCcEeEEEEccCCcEEeC
Q psy7061 47 NQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 47 ~~~~v~~~~~~~~~~~i~s 65 (65)
|.+....+.....|+.|+|
T Consensus 37 H~G~~Y~LR~Tr~GKLILT 55 (56)
T PRK10183 37 HDGQEYLLRKTQAGKLLLT 55 (56)
T ss_pred ECCcEEEeEEccCCceEec
Confidence 6677777777778877764
No 421
>PF13983 YsaB: YsaB-like lipoprotein
Probab=33.62 E-value=39 Score=13.21 Aligned_cols=12 Identities=33% Similarity=0.791 Sum_probs=6.7
Q ss_pred EEEEECCCCCEE
Q psy7061 9 LHCVFSPDCRLL 20 (65)
Q Consensus 9 ~~~~~~~~~~~~ 20 (65)
..++|.++|+.+
T Consensus 61 FvCSFD~dGqFL 72 (77)
T PF13983_consen 61 FVCSFDADGQFL 72 (77)
T ss_pred eEEeECCCCcEE
Confidence 345566666644
No 422
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=33.46 E-value=79 Score=16.69 Aligned_cols=38 Identities=24% Similarity=0.265 Sum_probs=23.9
Q ss_pred eEEEEECCCCC-EEEE-ecCCCcEEEEECCCCceEEEeec
Q psy7061 8 GLHCVFSPDCR-LLAT-TSADQTARIWNTEDFSLVRELGT 45 (65)
Q Consensus 8 v~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 45 (65)
+.++..+.+.+ .+.. ...++.+.+||..+++.+.....
T Consensus 291 ~~Si~Vsqd~~P~L~~~~~~~~~l~v~D~~tGk~~~~~~~ 330 (342)
T PF06433_consen 291 IDSIAVSQDDKPLLYALSAGDGTLDVYDAATGKLVRSIEQ 330 (342)
T ss_dssp ESEEEEESSSS-EEEEEETTTTEEEEEETTT--EEEEE--
T ss_pred cceEEEccCCCcEEEEEcCCCCeEEEEeCcCCcEEeehhc
Confidence 44666766554 4443 44578899999999988877764
No 423
>KOG2109|consensus
Probab=33.31 E-value=82 Score=18.54 Aligned_cols=33 Identities=18% Similarity=0.242 Sum_probs=22.1
Q ss_pred CccccceEEEEECCCCCEEEEecC-CCcEEEEEC
Q psy7061 2 AAHRAYGLHCVFSPDCRLLATTSA-DQTARIWNT 34 (65)
Q Consensus 2 ~~~~~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~ 34 (65)
+.|...+..++|.+.+..++++.- ...|.++.+
T Consensus 312 kAhkspiSaLcfdqsgsllViasi~g~nVnvfRi 345 (788)
T KOG2109|consen 312 KAHKSPISALCFDQSGSLLVIASITGRNVNVFRI 345 (788)
T ss_pred eeecCcccccccccCceEEEEEeeccceeeeEEe
Confidence 567788888889888876666553 344555544
No 424
>PF07250 Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterPro: IPR009880 This entry represents the N terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes. Glyoxal oxidase catalyses the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium [].
Probab=33.01 E-value=69 Score=15.86 Aligned_cols=8 Identities=0% Similarity=0.127 Sum_probs=4.1
Q ss_pred EEECCCCc
Q psy7061 31 IWNTEDFS 38 (65)
Q Consensus 31 ~~~~~~~~ 38 (65)
+||+.+..
T Consensus 50 ~yD~~tn~ 57 (243)
T PF07250_consen 50 EYDPNTNT 57 (243)
T ss_pred EEecCCCc
Confidence 45655443
No 425
>COG4831 Roadblock/LC7 domain [Function unknown]
Probab=32.90 E-value=48 Score=13.95 Aligned_cols=17 Identities=29% Similarity=0.317 Sum_probs=11.5
Q ss_pred cceEEEEECCCCCEEEE
Q psy7061 6 AYGLHCVFSPDCRLLAT 22 (65)
Q Consensus 6 ~~v~~~~~~~~~~~~~~ 22 (65)
+.+..-.|+|||+.+..
T Consensus 13 Gv~AAGefs~DGkLv~Y 29 (109)
T COG4831 13 GVMAAGEFSPDGKLVEY 29 (109)
T ss_pred ceeEeceeCCCCceEEe
Confidence 44556678888887654
No 426
>KOG2727|consensus
Probab=32.73 E-value=1e+02 Score=19.17 Aligned_cols=37 Identities=24% Similarity=0.236 Sum_probs=25.0
Q ss_pred eEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEee
Q psy7061 8 GLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELG 44 (65)
Q Consensus 8 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 44 (65)
-..++.+|++...+....=++|.+.|......++.+.
T Consensus 324 ge~lslSP~gtlAAVTD~lgRVlLlDta~~ivvr~wK 360 (1244)
T KOG2727|consen 324 GEKLSLSPSGTLAAVTDSLGRVLLLDTAALIVVRLWK 360 (1244)
T ss_pred cceeeeCCCccEEEEecccCcEEEEehhhhhHHHHhc
Confidence 3456778988888777777777777766554444333
No 427
>KOG2467|consensus
Probab=32.38 E-value=83 Score=17.12 Aligned_cols=20 Identities=15% Similarity=0.057 Sum_probs=17.4
Q ss_pred CCEEEEecCCCcEEEEECCC
Q psy7061 17 CRLLATTSADQTARIWNTED 36 (65)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~ 36 (65)
|-.+++++.|..+-+||++.
T Consensus 341 Gy~lvtgGTDnHlvLvDLr~ 360 (477)
T KOG2467|consen 341 GYKLVTGGTDNHLVLVDLRP 360 (477)
T ss_pred CceEecCCccceEEEEeccc
Confidence 55789999999999999984
No 428
>KOG1559|consensus
Probab=31.12 E-value=80 Score=15.99 Aligned_cols=20 Identities=10% Similarity=0.042 Sum_probs=13.7
Q ss_pred EEEeeccCCCcEeEEEEccCC
Q psy7061 40 VRELGTANQRWVWDAAFTLDS 60 (65)
Q Consensus 40 ~~~~~~~~~~~v~~~~~~~~~ 60 (65)
+.+... .+-+|..++|+|..
T Consensus 251 vSTv~~-~kYPvtgfQWHPEK 270 (340)
T KOG1559|consen 251 VSTVES-KKYPVTGFQWHPEK 270 (340)
T ss_pred EEeecc-eeccceeeeecCcc
Confidence 334444 66788889999864
No 429
>PF09142 TruB_C: tRNA Pseudouridine synthase II, C terminal; InterPro: IPR015225 Pseudouridine synthases catalyse the isomerisation of uridine to pseudouridine (Psi) in a variety of RNA molecules, and may function as RNA chaperones. Pseudouridine is the most abundant modified nucleotide found in all cellular RNAs. There are four distinct families of pseudouridine synthases that share no global sequence similarity, but which do share the same fold of their catalytic domain(s) and uracil-binding site and are descended from a common molecular ancestor. The catalytic domain consists of two subdomains, each of which has an alpha+beta structure that has some similarity to the ferredoxin-like fold (note: some pseudouridine synthases contain additional domains). The active site is the most conserved structural region of the superfamily and is located between the two homologous domains. These families are []: Pseudouridine synthase I, TruA. Pseudouridine synthase II, TruB, which contains and additional C-terminal PUA domain. Pseudouridine synthase RsuA (ribosomal small subunit) and RluC/RluD (ribosomal large subunits), both of which contain an additional N-terminal alpha-L RNA-binding motif. Pseudouridine synthase TruD, which has a natural circular permutation in the catalytic domain, as well as an insertion of a family-specific alpha+beta subdomain. TruB is responsible for the pseudouridine residue present in the T loops of virtually all tRNAs. TruB recognises the preformed 3-D structure of the T loop primarily through shape complementarity. It accesses its substrate uridyl residue by flipping out the nucleotide and disrupts the tertiary structure of tRNA []. The C-terminal domain adopts a secondary structure consisting of a four-stranded beta sheet and one alpha helix, similar to that found in PUA domains. It is predominantly involved in RNA-binding, being mostly found in tRNA pseudouridine synthase B (TruB) []. ; GO: 0003723 RNA binding, 0009982 pseudouridine synthase activity, 0001522 pseudouridine synthesis, 0009451 RNA modification; PDB: 1SGV_B.
Probab=30.78 E-value=39 Score=12.32 Aligned_cols=11 Identities=36% Similarity=0.622 Sum_probs=5.0
Q ss_pred EEEccCCcEEe
Q psy7061 54 AAFTLDSKFLL 64 (65)
Q Consensus 54 ~~~~~~~~~i~ 64 (65)
.++.|+|+.++
T Consensus 30 aa~~pdG~lvA 40 (56)
T PF09142_consen 30 AAFAPDGRLVA 40 (56)
T ss_dssp EEE-TTS-EEE
T ss_pred EEECCCCcEEE
Confidence 35566666553
No 430
>KOG0155|consensus
Probab=30.28 E-value=1.1e+02 Score=17.41 Aligned_cols=23 Identities=13% Similarity=0.202 Sum_probs=15.3
Q ss_pred CCCCCEEEEecCCCcEEEEECCC
Q psy7061 14 SPDCRLLATTSADQTARIWNTED 36 (65)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~ 36 (65)
-|++.|.+.-..|+.+++|+..+
T Consensus 111 ipgtdWcVVwTgD~RvFFyNpkt 133 (617)
T KOG0155|consen 111 IPGTDWCVVWTGDNRVFFYNPKT 133 (617)
T ss_pred CCCCCeEEEEeCCCceEEeCCcc
Confidence 34455777777777777777654
No 431
>PRK11138 outer membrane biogenesis protein BamB; Provisional
Probab=29.98 E-value=90 Score=16.24 Aligned_cols=27 Identities=19% Similarity=0.119 Sum_probs=19.0
Q ss_pred CEEEEecCCCcEEEEECCCCceEEEee
Q psy7061 18 RLLATTSADQTARIWNTEDFSLVRELG 44 (65)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 44 (65)
..+..+..++.+...+..+++.+....
T Consensus 336 g~l~v~~~~G~l~~ld~~tG~~~~~~~ 362 (394)
T PRK11138 336 GYLVVGDSEGYLHWINREDGRFVAQQK 362 (394)
T ss_pred CEEEEEeCCCEEEEEECCCCCEEEEEE
Confidence 345666778888888888887665544
No 432
>TIGR00189 tesB acyl-CoA thioesterase II. Subunit: homotetramer.
Probab=29.34 E-value=80 Score=15.43 Aligned_cols=13 Identities=23% Similarity=0.434 Sum_probs=6.1
Q ss_pred EEEEECCCCceEEE
Q psy7061 29 ARIWNTEDFSLVRE 42 (65)
Q Consensus 29 ~~~~~~~~~~~~~~ 42 (65)
-.+|+ .++..+.+
T Consensus 251 ~~l~d-~~G~lvAs 263 (271)
T TIGR00189 251 GKIFT-RDGVLIAS 263 (271)
T ss_pred EEEEC-CCCCEEEE
Confidence 34565 33554443
No 433
>PRK08857 para-aminobenzoate synthase component II; Provisional
Probab=28.93 E-value=72 Score=14.79 Aligned_cols=15 Identities=13% Similarity=-0.015 Sum_probs=11.3
Q ss_pred CCCcEeEEEEccCCc
Q psy7061 47 NQRWVWDAAFTLDSK 61 (65)
Q Consensus 47 ~~~~v~~~~~~~~~~ 61 (65)
....+..++|+|+..
T Consensus 163 ~~~pi~gvQfHPE~~ 177 (193)
T PRK08857 163 KTLPIEAVQFHPESI 177 (193)
T ss_pred CCCCEEEEeeCCCcC
Confidence 345789999999853
No 434
>COG1946 TesB Acyl-CoA thioesterase [Lipid metabolism]
Probab=28.68 E-value=77 Score=16.31 Aligned_cols=13 Identities=15% Similarity=0.447 Sum_probs=6.8
Q ss_pred EEEEECCCCceEEE
Q psy7061 29 ARIWNTEDFSLVRE 42 (65)
Q Consensus 29 ~~~~~~~~~~~~~~ 42 (65)
-++|+ ++|+.+..
T Consensus 263 G~lf~-r~G~LiA~ 275 (289)
T COG1946 263 GQLFD-RDGQLIAS 275 (289)
T ss_pred eEEEc-CCCCEEEE
Confidence 45666 44555443
No 435
>PF10433 MMS1_N: Mono-functional DNA-alkylating methyl methanesulfonate N-term; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 2B5N_C 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A ....
Probab=28.29 E-value=1.1e+02 Score=16.70 Aligned_cols=29 Identities=14% Similarity=0.234 Sum_probs=20.9
Q ss_pred eEEEEECCCCCEEEEecCCCcEEEEECCC
Q psy7061 8 GLHCVFSPDCRLLATTSADQTARIWNTED 36 (65)
Q Consensus 8 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 36 (65)
...+..+|.++.++.+...+...++.+..
T Consensus 46 G~~l~vDP~~R~i~v~a~e~~~~v~~l~~ 74 (504)
T PF10433_consen 46 GQYLAVDPSGRCIAVSAYEGNFLVYPLNR 74 (504)
T ss_dssp --EEEE-TTSSEEEEEEBTTEEEEEE-SS
T ss_pred CcEEEECCcCCEEEEEecCCeEEEEEecc
Confidence 44577789999998888888888887765
No 436
>COG1637 Predicted nuclease of the RecB family [DNA replication, recombination, and repair]
Probab=28.11 E-value=91 Score=15.72 Aligned_cols=26 Identities=12% Similarity=0.133 Sum_probs=18.5
Q ss_pred EEEECCCCCEEEEecCCCcEEEEECC
Q psy7061 10 HCVFSPDCRLLATTSADQTARIWNTE 35 (65)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 35 (65)
-+.|.|.+..+.....++.+.+|.++
T Consensus 72 P~nW~pp~s~~~~~~~~g~l~l~~ir 97 (253)
T COG1637 72 PLNWQPPGSSIAAAVRDGLLTLLSIR 97 (253)
T ss_pred CcccCCCCceEEEeecCCceEEEEEc
Confidence 35677777777666777877777766
No 437
>KOG0183|consensus
Probab=27.90 E-value=50 Score=16.19 Aligned_cols=11 Identities=55% Similarity=0.872 Sum_probs=7.7
Q ss_pred EEECCCCCEEE
Q psy7061 11 CVFSPDCRLLA 21 (65)
Q Consensus 11 ~~~~~~~~~~~ 21 (65)
-.|+|||..+-
T Consensus 9 tvFSPDGhL~Q 19 (249)
T KOG0183|consen 9 TVFSPDGHLFQ 19 (249)
T ss_pred EEECCCCCEEe
Confidence 35799998653
No 438
>KOG3885|consensus
Probab=25.56 E-value=85 Score=14.48 Aligned_cols=12 Identities=17% Similarity=0.155 Sum_probs=6.2
Q ss_pred EEEEccCCcEEe
Q psy7061 53 DAAFTLDSKFLL 64 (65)
Q Consensus 53 ~~~~~~~~~~i~ 64 (65)
-+|.+++|+.+.
T Consensus 80 YL~Mn~~G~Lyg 91 (155)
T KOG3885|consen 80 YLAMNKEGKLYA 91 (155)
T ss_pred EEEECCCCcEec
Confidence 344466665543
No 439
>PF00843 Arena_nucleocap: Arenavirus nucleocapsid protein; InterPro: IPR000229 Arenaviruses are single stranded RNA viruses. The arenavirus S RNAs that have been characterised include conserved terminal sequences, an ambisense arrangement of the coding regions for the precursor glycoprotein (GPC) and nucleocapsid (N) proteins and an intergenic region capable of forming a base-paired "hairpin" structure. The mature glycoproteins that result are G1 and G2 and the N protein []. This family represents the nucleocapsid protein that encapsulates the viral ssRNA [].; GO: 0019013 viral nucleocapsid; PDB: 3MX5_A 3MX2_C 3MWT_C 3Q7C_A 3MWP_B 3Q7B_A 3T5Q_E 3T5N_A 3R3L_B.
Probab=25.24 E-value=35 Score=18.68 Aligned_cols=16 Identities=25% Similarity=0.594 Sum_probs=9.0
Q ss_pred ecCCCcEEEEECCCCc
Q psy7061 23 TSADQTARIWNTEDFS 38 (65)
Q Consensus 23 ~~~~~~~~~~~~~~~~ 38 (65)
+..++.|++||+.+..
T Consensus 148 ~~~~GVVrvWDvkd~~ 163 (533)
T PF00843_consen 148 GGRNGVVRVWDVKDPS 163 (533)
T ss_dssp --SSSEE-SEE-S-GG
T ss_pred CCCCCeEEEEecCCHH
Confidence 4567899999998654
No 440
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=24.94 E-value=1.5e+02 Score=16.99 Aligned_cols=56 Identities=21% Similarity=0.143 Sum_probs=30.5
Q ss_pred ccceEEEEECCCCCEEEEecCCC--cEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 5 RAYGLHCVFSPDCRLLATTSADQ--TARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 5 ~~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
...+....|+|++..++....++ ...+|...... .... ....+....|+|.+..++
T Consensus 59 ~~~~~~~~~spdg~~~~~~~~~~~~~~~l~l~~~~g---~~~~-~~~~v~~~~~~~~g~~~~ 116 (620)
T COG1506 59 GGGVSELRWSPDGSVLAFVSTDGGRVAQLYLVDVGG---LITK-TAFGVSDARWSPDGDRIA 116 (620)
T ss_pred CCcccccccCCCCCEEEEEeccCCCcceEEEEecCC---ceee-eecccccceeCCCCCeEE
Confidence 34566777889888766555222 22333322111 2222 455667777787776653
No 441
>TIGR00566 trpG_papA glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase. This model describes the glutamine amidotransferase domain or peptide of the tryptophan-biosynthetic pathway enzyme anthranilate synthase or of the folate biosynthetic pathway enzyme para-aminobenzoate synthase. In at least one case, a single polypeptide from Bacillus subtilis was shown to have both functions. This model covers a subset of the sequences described by the pfam model GATase.
Probab=24.69 E-value=89 Score=14.46 Aligned_cols=14 Identities=14% Similarity=0.022 Sum_probs=10.7
Q ss_pred CCCcEeEEEEccCC
Q psy7061 47 NQRWVWDAAFTLDS 60 (65)
Q Consensus 47 ~~~~v~~~~~~~~~ 60 (65)
....+..++|+|+.
T Consensus 159 ~~~~i~gvQfHPE~ 172 (188)
T TIGR00566 159 RDLPLEGVQFHPES 172 (188)
T ss_pred CCCCEEEEEeCCCc
Confidence 34468999999974
No 442
>PF13619 KTSC: KTSC domain
Probab=24.49 E-value=55 Score=11.95 Aligned_cols=27 Identities=11% Similarity=0.126 Sum_probs=18.2
Q ss_pred cceEEEEECCCCCEEEEecCCCcEEEE
Q psy7061 6 AYGLHCVFSPDCRLLATTSADQTARIW 32 (65)
Q Consensus 6 ~~v~~~~~~~~~~~~~~~~~~~~~~~~ 32 (65)
..|..+.+.++.+.|-..-.+|.++.+
T Consensus 4 s~I~~v~Yd~~~~~L~V~F~~G~~Y~Y 30 (60)
T PF13619_consen 4 SNIRSVGYDPETRTLEVEFKSGSVYRY 30 (60)
T ss_pred CcccEEeECCCCCEEEEEEcCCCEEEE
Confidence 456778888877776666666665554
No 443
>COG2133 Glucose/sorbosone dehydrogenases [Carbohydrate transport and metabolism]
Probab=24.04 E-value=1.4e+02 Score=16.30 Aligned_cols=18 Identities=39% Similarity=0.580 Sum_probs=12.4
Q ss_pred EEEEECCCCCEEEEecCC
Q psy7061 9 LHCVFSPDCRLLATTSAD 26 (65)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~ 26 (65)
-.+.|+|+++++++.+..
T Consensus 180 ~~l~f~pDG~Lyvs~G~~ 197 (399)
T COG2133 180 GRLVFGPDGKLYVTTGSN 197 (399)
T ss_pred ccEEECCCCcEEEEeCCC
Confidence 357789999766665544
No 444
>KOG1296|consensus
Probab=23.27 E-value=96 Score=14.29 Aligned_cols=20 Identities=25% Similarity=0.277 Sum_probs=13.8
Q ss_pred EEEECCCCCEEEEecCCCcE
Q psy7061 10 HCVFSPDCRLLATTSADQTA 29 (65)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~ 29 (65)
-++|.|+.-+.+.+...|..
T Consensus 107 pidF~p~~~w~a~s~esG~~ 126 (161)
T KOG1296|consen 107 PIDFYPRTGWFAVSAESGTA 126 (161)
T ss_pred ceeecCCceEEEEecccCce
Confidence 46788877777776666543
No 445
>KOG2006|consensus
Probab=22.98 E-value=1.3e+02 Score=18.67 Aligned_cols=30 Identities=13% Similarity=0.309 Sum_probs=21.3
Q ss_pred ceEEEEECCCCCEEEEecCCCcEEEEECCC
Q psy7061 7 YGLHCVFSPDCRLLATTSADQTARIWNTED 36 (65)
Q Consensus 7 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 36 (65)
+..++........++.|...+.+.++++..
T Consensus 150 DAvc~SV~~e~~lla~G~~~g~v~~y~~~~ 179 (1023)
T KOG2006|consen 150 DAVCCSVNHEFQLLAYGTPVGEVLLYSIDE 179 (1023)
T ss_pred cceeeeccchhhhheecccccceeehhhhh
Confidence 344555555667788888888888888764
No 446
>PF05578 Peptidase_S31: Pestivirus NS3 polyprotein peptidase S31; InterPro: IPR000280 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S31 (clan PA(S)). The type example is pestivirus NS3 polyprotein peptidase from bovine viral diarrhea virus, which is Type 1 pestivirus. The pestiviruses are single-stranded RNA viruses whose genomes encode one large polyprotein []. The p80 endopeptidase resides towards the middle of the polyprotein and is responsible for processing all non-structural pestivirus proteins [, ]. The p80 enzyme is similar to other proteases in the PA(S) clan and is predicted to have a fold similar to that of chymotrypsin [, ]. An HDS catalytic triad has been identified [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis
Probab=22.71 E-value=1e+02 Score=14.33 Aligned_cols=32 Identities=9% Similarity=-0.064 Sum_probs=18.4
Q ss_pred cccceEEEEECCCCCEEEEecCCCcEEEEECC
Q psy7061 4 HRAYGLHCVFSPDCRLLATTSADQTARIWNTE 35 (65)
Q Consensus 4 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 35 (65)
|++.+.+++.-..++-+..+..-+..++...+
T Consensus 60 hqggissvdhvt~gkd~lvcdsmgrtrvvcqs 91 (211)
T PF05578_consen 60 HQGGISSVDHVTAGKDLLVCDSMGRTRVVCQS 91 (211)
T ss_pred ccCCcccceeeecCCceEEecCCCceEEEEcc
Confidence 66666666655555545555555555555444
No 447
>COG4305 Endoglucanase C-terminal domain/subunit and related proteins [Carbohydrate transport and metabolism]
Probab=22.54 E-value=1.1e+02 Score=14.56 Aligned_cols=20 Identities=10% Similarity=0.182 Sum_probs=14.4
Q ss_pred ccccceEEEEECCCCCEEEE
Q psy7061 3 AHRAYGLHCVFSPDCRLLAT 22 (65)
Q Consensus 3 ~~~~~v~~~~~~~~~~~~~~ 22 (65)
.|...|..+++..++.++--
T Consensus 157 nH~yPV~KlE~~qdg~Winl 176 (232)
T COG4305 157 NHKYPVMKLEYEQDGKWINL 176 (232)
T ss_pred cccCceEEEEEecCCeEeec
Confidence 47777888888877776543
No 448
>PF14782 BBS2_C: Ciliary BBSome complex subunit 2, C-terminal
Probab=20.74 E-value=1.7e+02 Score=16.15 Aligned_cols=26 Identities=19% Similarity=0.070 Sum_probs=20.2
Q ss_pred ceEEEEECCCC-CEEEEecCCCcEEEE
Q psy7061 7 YGLHCVFSPDC-RLLATTSADQTARIW 32 (65)
Q Consensus 7 ~v~~~~~~~~~-~~~~~~~~~~~~~~~ 32 (65)
.+...+|.-+| ..++.++.||.|+-|
T Consensus 16 ~vv~~DYR~dG~~~lI~csvdGeVrGy 42 (431)
T PF14782_consen 16 GVVVADYRMDGKPQLICCSVDGEVRGY 42 (431)
T ss_pred eeeeeccccCCCceEEEEEcCCEEEEe
Confidence 45556677776 578888999999999
No 449
>smart00135 LY Low-density lipoprotein-receptor YWTD domain. Type "B" repeats in low-density lipoprotein (LDL) receptor that plays a central role in mammalian cholesterol metabolism. Also present in a variety of molecules similar to gp300/megalin.
Probab=20.64 E-value=51 Score=10.19 Aligned_cols=10 Identities=10% Similarity=-0.250 Sum_probs=4.8
Q ss_pred eEEEEccCCc
Q psy7061 52 WDAAFTLDSK 61 (65)
Q Consensus 52 ~~~~~~~~~~ 61 (65)
..+++++...
T Consensus 12 ~~la~d~~~~ 21 (43)
T smart00135 12 NGLAVDWIEG 21 (43)
T ss_pred CEEEEeecCC
Confidence 3455555444
No 450
>PF08149 BING4CT: BING4CT (NUC141) domain; InterPro: IPR012952 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This C-terminal domain is found in the BING4 family of nucleolar WD40 repeat proteins [].
Probab=20.27 E-value=87 Score=12.70 Aligned_cols=28 Identities=14% Similarity=0.010 Sum_probs=20.1
Q ss_pred ccceEEEEECCCCCEEEEecCCCcEEEE
Q psy7061 5 RAYGLHCVFSPDCRLLATTSADQTARIW 32 (65)
Q Consensus 5 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 32 (65)
...|..+.|+|-...+..+...|.-.+.
T Consensus 9 ~~~v~~~~F~PfEDvLgvGh~~G~sSii 36 (80)
T PF08149_consen 9 GSPVESLRFCPFEDVLGVGHSKGFSSII 36 (80)
T ss_pred CCeeeeeEEechHHeeEeeccCceeEEe
Confidence 3468899999977777777776654443
No 451
>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit. CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....
Probab=20.24 E-value=1.4e+02 Score=15.05 Aligned_cols=29 Identities=10% Similarity=0.037 Sum_probs=20.7
Q ss_pred ceEEEEECCCCCEEEEecCCCcEEEEECC
Q psy7061 7 YGLHCVFSPDCRLLATTSADQTARIWNTE 35 (65)
Q Consensus 7 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 35 (65)
.++++.+-+++..++.+..++.+.++...
T Consensus 174 ~v~~~~~l~d~~~~i~~D~~gnl~~l~~~ 202 (321)
T PF03178_consen 174 WVTAAEFLVDEDTIIVGDKDGNLFVLRYN 202 (321)
T ss_dssp EEEEEEEE-SSSEEEEEETTSEEEEEEE-
T ss_pred cEEEEEEecCCcEEEEEcCCCeEEEEEEC
Confidence 46777777555678888889988887665
Done!