Query psy7061
Match_columns 65
No_of_seqs 114 out of 2620
Neff 12.8
Searched_HMMs 29240
Date Fri Aug 16 17:08:02 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7061.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/7061hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4h5i_A Guanine nucleotide-exch 99.8 4E-18 1.4E-22 79.0 8.8 63 3-65 267-329 (365)
2 2ymu_A WD-40 repeat protein; u 99.7 1.9E-17 6.6E-22 79.5 8.2 63 1-65 12-74 (577)
3 4aow_A Guanine nucleotide-bind 99.7 4.1E-16 1.4E-20 71.0 8.9 64 1-65 34-103 (340)
4 3vu4_A KMHSV2; beta-propeller 99.7 7.8E-16 2.7E-20 71.2 9.4 64 2-65 192-257 (355)
5 3iz6_a 40S ribosomal protein R 99.7 2.2E-16 7.5E-21 73.5 6.9 64 1-65 62-125 (380)
6 3ow8_A WD repeat-containing pr 99.7 1.5E-15 5.2E-20 69.5 9.1 63 2-65 245-307 (321)
7 2xzm_R RACK1; ribosome, transl 99.7 1.5E-15 5E-20 69.9 9.0 63 2-65 73-135 (343)
8 1got_B GT-beta; complex (GTP-b 99.7 3.2E-15 1.1E-19 68.7 9.1 64 1-65 51-114 (340)
9 4ery_A WD repeat-containing pr 99.7 3.8E-15 1.3E-19 67.6 9.1 64 1-65 19-82 (312)
10 1vyh_C Platelet-activating fac 99.7 1.5E-15 5.2E-20 71.3 8.0 63 2-65 105-167 (410)
11 3frx_A Guanine nucleotide-bind 99.7 3.3E-15 1.1E-19 68.3 8.6 63 2-65 62-124 (319)
12 2ynn_A Coatomer subunit beta'; 99.7 1.5E-15 5.1E-20 69.0 7.4 63 2-65 10-72 (304)
13 3zwl_B Eukaryotic translation 99.7 3.7E-15 1.3E-19 68.2 8.8 64 1-65 28-91 (369)
14 3ow8_A WD repeat-containing pr 99.7 3.6E-15 1.2E-19 68.3 8.6 63 2-65 203-265 (321)
15 1got_B GT-beta; complex (GTP-b 99.6 8.2E-15 2.8E-19 67.4 9.1 63 2-65 181-243 (340)
16 2pbi_B Guanine nucleotide-bind 99.6 6.1E-15 2.1E-19 68.2 8.1 64 1-65 60-123 (354)
17 4gqb_B Methylosome protein 50; 99.6 8.2E-15 2.8E-19 67.8 8.4 59 3-62 125-183 (344)
18 1nr0_A Actin interacting prote 99.6 1.1E-14 3.7E-19 71.1 9.0 64 2-65 187-256 (611)
19 2hes_X YDR267CP; beta-propelle 99.6 1.6E-14 5.6E-19 66.2 8.8 63 2-65 104-170 (330)
20 1vyh_C Platelet-activating fac 99.6 6.3E-15 2.1E-19 69.2 7.4 63 2-65 147-209 (410)
21 3fm0_A Protein CIAO1; WDR39,SG 99.6 3E-14 1E-18 65.7 9.3 63 2-65 58-122 (345)
22 2ymu_A WD-40 repeat protein; u 99.6 1.6E-14 5.5E-19 69.5 8.7 63 1-65 53-115 (577)
23 3dm0_A Maltose-binding peripla 99.6 1.4E-14 4.7E-19 71.4 8.2 63 2-65 427-489 (694)
24 3vl1_A 26S proteasome regulato 99.6 2.8E-14 9.5E-19 66.6 8.8 63 2-65 136-198 (420)
25 3mmy_A MRNA export factor; mRN 99.6 2E-14 6.7E-19 65.9 8.0 59 6-65 274-332 (368)
26 2ynn_A Coatomer subunit beta'; 99.6 1.6E-14 5.6E-19 65.6 7.3 62 3-65 53-114 (304)
27 3f3f_A Nucleoporin SEH1; struc 99.6 3.7E-14 1.3E-18 64.3 8.4 64 1-65 7-76 (351)
28 4ery_A WD repeat-containing pr 99.6 6.5E-14 2.2E-18 63.6 9.0 63 2-65 62-124 (312)
29 2pm7_B Protein transport prote 99.6 5.7E-14 1.9E-18 63.7 8.7 64 1-65 5-72 (297)
30 1nr0_A Actin interacting prote 99.6 8.4E-14 2.9E-18 68.1 9.5 64 1-65 143-207 (611)
31 4g56_B MGC81050 protein; prote 99.6 3.9E-14 1.3E-18 65.7 8.0 62 2-65 266-329 (357)
32 3fm0_A Protein CIAO1; WDR39,SG 99.6 5.2E-14 1.8E-18 64.9 8.3 63 2-65 102-167 (345)
33 3frx_A Guanine nucleotide-bind 99.6 9.5E-14 3.2E-18 63.5 9.0 61 2-64 193-253 (319)
34 2hes_X YDR267CP; beta-propelle 99.6 1.3E-13 4.3E-18 63.3 8.9 61 4-65 57-124 (330)
35 3mmy_A MRNA export factor; mRN 99.6 1.2E-13 4E-18 63.3 8.6 64 1-65 35-103 (368)
36 3sfz_A APAF-1, apoptotic pepti 99.6 1E-13 3.5E-18 71.3 9.1 63 2-65 612-674 (1249)
37 2oit_A Nucleoporin 214KDA; NH2 99.6 8.4E-14 2.9E-18 66.2 8.3 63 2-65 146-209 (434)
38 4gqb_B Methylosome protein 50; 99.6 4.9E-14 1.7E-18 65.3 7.3 60 2-63 254-314 (344)
39 3mkq_A Coatomer beta'-subunit; 99.5 4.9E-14 1.7E-18 70.0 7.4 63 2-65 10-72 (814)
40 4gq1_A NUP37; propeller, trans 99.5 2.1E-14 7.1E-19 67.2 5.7 63 1-64 132-203 (393)
41 1erj_A Transcriptional repress 99.5 3.7E-13 1.3E-17 63.0 9.4 58 7-65 125-182 (393)
42 3bg1_A Protein SEC13 homolog; 99.5 5.5E-14 1.9E-18 64.2 6.6 64 1-65 9-76 (316)
43 2aq5_A Coronin-1A; WD40 repeat 99.5 2E-13 6.9E-18 63.8 8.4 62 2-64 78-148 (402)
44 3odt_A Protein DOA1; ubiquitin 99.5 1.1E-13 3.8E-18 62.4 7.3 63 1-65 14-76 (313)
45 3iz6_a 40S ribosomal protein R 99.5 1.4E-13 5E-18 64.1 7.7 64 2-65 246-315 (380)
46 3jrp_A Fusion protein of prote 99.5 7.4E-14 2.5E-18 64.2 6.6 63 2-65 8-74 (379)
47 2aq5_A Coronin-1A; WD40 repeat 99.5 1.8E-13 6.3E-18 63.9 7.9 63 2-65 128-193 (402)
48 2pbi_B Guanine nucleotide-bind 99.5 4.1E-13 1.4E-17 62.2 8.9 63 2-65 193-257 (354)
49 3k26_A Polycomb protein EED; W 99.5 4.3E-13 1.5E-17 61.5 8.7 63 2-65 112-178 (366)
50 4g56_B MGC81050 protein; prote 99.5 5.1E-13 1.8E-17 62.0 8.9 58 3-61 137-194 (357)
51 3dwl_C Actin-related protein 2 99.5 7.7E-14 2.6E-18 64.5 6.0 63 2-65 52-117 (377)
52 3f3f_A Nucleoporin SEH1; struc 99.5 2.4E-13 8.3E-18 61.7 7.4 63 2-65 211-323 (351)
53 3lrv_A PRE-mRNA-splicing facto 99.5 4.1E-13 1.4E-17 61.8 8.1 62 4-65 169-231 (343)
54 2xzm_R RACK1; ribosome, transl 99.5 5.6E-13 1.9E-17 61.4 8.2 64 1-65 17-93 (343)
55 1k8k_C P40, ARP2/3 complex 41 99.5 9.3E-13 3.2E-17 60.6 8.3 62 2-64 199-260 (372)
56 2pm7_B Protein transport prote 99.5 7.6E-13 2.6E-17 60.0 7.8 63 1-64 49-117 (297)
57 2pm9_A Protein WEB1, protein t 99.5 5.9E-13 2E-17 62.0 7.5 61 3-64 260-322 (416)
58 3bg1_A Protein SEC13 homolog; 99.5 7.1E-13 2.4E-17 60.6 7.6 64 1-65 208-279 (316)
59 3dwl_C Actin-related protein 2 99.5 1.4E-13 4.7E-18 63.7 5.2 62 3-65 203-268 (377)
60 1k8k_C P40, ARP2/3 complex 41 99.5 7.5E-13 2.6E-17 60.9 7.6 62 3-65 6-69 (372)
61 3dw8_B Serine/threonine-protei 99.5 1E-12 3.5E-17 61.8 8.0 62 3-65 224-302 (447)
62 3mkq_A Coatomer beta'-subunit; 99.5 5.5E-13 1.9E-17 66.3 7.3 63 2-65 52-114 (814)
63 4e54_B DNA damage-binding prot 99.5 7.1E-13 2.4E-17 62.6 7.3 62 3-65 117-182 (435)
64 1gxr_A ESG1, transducin-like e 99.4 3.2E-12 1.1E-16 58.1 8.7 62 3-65 139-200 (337)
65 1pgu_A Actin interacting prote 99.4 3.2E-12 1.1E-16 61.9 9.1 64 2-65 485-558 (615)
66 3zwl_B Eukaryotic translation 99.4 3.8E-12 1.3E-16 58.4 9.0 61 2-64 71-131 (369)
67 2oaj_A Protein SNI1; WD40 repe 99.4 9E-13 3.1E-17 67.0 7.5 61 3-65 486-591 (902)
68 1pgu_A Actin interacting prote 99.4 2E-12 6.9E-17 62.6 8.3 60 4-65 530-600 (615)
69 3lrv_A PRE-mRNA-splicing facto 99.4 3.1E-12 1.1E-16 58.9 8.5 63 3-65 123-187 (343)
70 1sq9_A Antiviral protein SKI8; 99.4 4.1E-12 1.4E-16 59.0 8.9 56 4-60 290-366 (397)
71 4h5i_A Guanine nucleotide-exch 99.4 2.8E-12 9.6E-17 59.7 8.2 58 6-65 134-193 (365)
72 4ggc_A P55CDC, cell division c 99.4 3.8E-12 1.3E-16 57.6 8.4 61 4-65 239-301 (318)
73 4aez_A CDC20, WD repeat-contai 99.4 2.2E-12 7.6E-17 60.4 7.8 61 2-63 214-274 (401)
74 3ei3_B DNA damage-binding prot 99.4 1.8E-12 6E-17 60.2 7.4 63 2-64 70-135 (383)
75 1r5m_A SIR4-interacting protei 99.4 6.1E-12 2.1E-16 58.6 9.1 60 4-65 107-166 (425)
76 3jro_A Fusion protein of prote 99.4 6.7E-13 2.3E-17 66.3 6.1 64 1-65 5-72 (753)
77 4aow_A Guanine nucleotide-bind 99.4 7.7E-12 2.6E-16 57.0 9.0 61 2-64 212-272 (340)
78 3dm0_A Maltose-binding peripla 99.4 8.6E-12 2.9E-16 61.7 9.6 62 3-65 515-578 (694)
79 1erj_A Transcriptional repress 99.4 3.3E-12 1.1E-16 59.8 7.7 62 3-65 308-375 (393)
80 3jrp_A Fusion protein of prote 99.4 3.9E-12 1.3E-16 58.6 7.8 62 2-64 52-119 (379)
81 1yfq_A Cell cycle arrest prote 99.4 2.2E-12 7.5E-17 58.9 6.9 63 2-65 8-74 (342)
82 4a11_B DNA excision repair pro 99.4 3.7E-12 1.3E-16 59.1 7.7 64 1-64 39-116 (408)
83 3odt_A Protein DOA1; ubiquitin 99.4 6.7E-12 2.3E-16 56.6 8.2 61 2-64 222-282 (313)
84 4gga_A P55CDC, cell division c 99.4 7.2E-12 2.5E-16 59.0 8.4 59 6-65 321-381 (420)
85 1gxr_A ESG1, transducin-like e 99.4 1.3E-11 4.5E-16 56.1 9.0 62 2-65 262-323 (337)
86 3ei3_B DNA damage-binding prot 99.4 4.9E-12 1.7E-16 58.7 7.6 62 2-65 201-268 (383)
87 1sq9_A Antiviral protein SKI8; 99.4 5.2E-12 1.8E-16 58.6 7.7 62 1-65 12-86 (397)
88 3k26_A Polycomb protein EED; W 99.4 7.6E-12 2.6E-16 57.4 7.6 61 4-65 68-133 (366)
89 4e54_B DNA damage-binding prot 99.4 1.4E-12 4.8E-17 61.6 5.3 64 1-65 246-313 (435)
90 2vdu_B TRNA (guanine-N(7)-)-me 99.4 9.4E-12 3.2E-16 59.1 8.0 63 3-65 100-166 (450)
91 4gga_A P55CDC, cell division c 99.4 2.2E-11 7.5E-16 57.4 9.1 56 2-58 144-199 (420)
92 3dw8_B Serine/threonine-protei 99.4 1.2E-11 4.3E-16 58.1 8.1 60 4-64 27-111 (447)
93 3gre_A Serine/threonine-protei 99.4 3.7E-12 1.3E-16 60.0 6.2 62 2-65 60-128 (437)
94 2vdu_B TRNA (guanine-N(7)-)-me 99.4 6E-12 2.1E-16 59.7 7.0 63 2-65 192-257 (450)
95 1r5m_A SIR4-interacting protei 99.4 2.1E-11 7.2E-16 56.8 8.4 62 2-65 286-347 (425)
96 1yfq_A Cell cycle arrest prote 99.4 2.2E-11 7.4E-16 55.6 8.3 59 4-65 250-309 (342)
97 3sfz_A APAF-1, apoptotic pepti 99.4 2.6E-11 8.8E-16 62.8 9.1 58 2-60 654-711 (1249)
98 2j04_A TAU60, YPL007P, hypothe 99.3 1.7E-11 6E-16 60.4 8.1 55 7-63 131-196 (588)
99 4a11_B DNA excision repair pro 99.3 6.2E-11 2.1E-15 55.1 9.5 63 2-65 242-351 (408)
100 2pm9_A Protein WEB1, protein t 99.3 1.4E-11 4.9E-16 57.4 7.3 62 3-65 65-131 (416)
101 3jro_A Fusion protein of prote 99.3 1.9E-11 6.5E-16 61.2 8.1 63 2-65 50-118 (753)
102 3v7d_B Cell division control p 99.3 3.9E-11 1.3E-15 56.9 8.8 61 2-64 159-221 (464)
103 3i2n_A WD repeat-containing pr 99.3 5.1E-12 1.7E-16 57.9 5.6 61 3-64 257-337 (357)
104 2j04_A TAU60, YPL007P, hypothe 99.3 1.8E-11 6.2E-16 60.4 7.6 60 3-65 83-146 (588)
105 2j04_B YDR362CP, TAU91; beta p 99.3 5.6E-12 1.9E-16 61.3 5.5 58 7-65 357-414 (524)
106 2oaj_A Protein SNI1; WD40 repe 99.3 1.7E-11 5.7E-16 62.6 7.3 61 2-64 572-646 (902)
107 3gre_A Serine/threonine-protei 99.3 1.7E-11 5.8E-16 57.8 6.2 61 4-64 213-277 (437)
108 2w18_A PALB2, fancn, partner a 99.3 4.5E-11 1.5E-15 56.1 7.3 48 17-65 295-343 (356)
109 2hqs_A Protein TOLB; TOLB, PAL 99.3 1.2E-10 4E-15 55.2 8.5 60 3-64 176-238 (415)
110 2xyi_A Probable histone-bindin 99.3 6.4E-11 2.2E-15 56.1 7.6 59 3-62 275-335 (430)
111 3vl1_A 26S proteasome regulato 99.3 1.4E-10 4.6E-15 54.4 8.5 57 8-65 100-156 (420)
112 2w18_A PALB2, fancn, partner a 99.3 2.6E-11 8.7E-16 56.9 5.9 60 5-64 178-242 (356)
113 3v7d_B Cell division control p 99.3 1.5E-10 5.3E-15 54.9 8.4 56 2-58 307-362 (464)
114 2xyi_A Probable histone-bindin 99.3 1.6E-10 5.5E-15 54.7 8.4 59 3-62 229-291 (430)
115 4ggc_A P55CDC, cell division c 99.3 3E-10 1E-14 51.4 9.0 55 2-57 64-118 (318)
116 3i2n_A WD repeat-containing pr 99.2 5E-11 1.7E-15 54.6 5.9 62 3-65 63-134 (357)
117 2j04_B YDR362CP, TAU91; beta p 99.2 1.9E-10 6.5E-15 56.1 7.4 62 2-65 263-328 (524)
118 4aez_A CDC20, WD repeat-contai 99.2 6.5E-10 2.2E-14 52.2 8.6 54 4-58 133-186 (401)
119 1k32_A Tricorn protease; prote 99.2 5.5E-10 1.9E-14 57.7 8.4 61 3-64 376-436 (1045)
120 4gq1_A NUP37; propeller, trans 99.2 2.9E-10 9.9E-15 53.4 6.4 48 17-65 329-376 (393)
121 3bws_A Protein LP49; two-domai 99.1 1E-09 3.4E-14 51.7 7.7 61 3-64 167-227 (433)
122 2hqs_A Protein TOLB; TOLB, PAL 99.1 2.6E-09 8.9E-14 50.7 8.4 60 3-64 220-282 (415)
123 2oit_A Nucleoporin 214KDA; NH2 99.1 1.8E-09 6E-14 51.7 7.8 61 3-64 190-256 (434)
124 2ovr_B FBW7, F-BOX/WD repeat p 99.1 2.3E-09 7.7E-14 50.9 8.1 59 4-64 361-423 (445)
125 2ojh_A Uncharacterized protein 99.1 3.8E-10 1.3E-14 50.4 5.2 61 3-64 39-100 (297)
126 1l0q_A Surface layer protein; 99.0 1.3E-08 4.6E-13 47.4 8.9 57 6-64 32-89 (391)
127 3vu4_A KMHSV2; beta-propeller 99.0 7E-09 2.4E-13 48.3 7.9 34 4-37 239-272 (355)
128 1p22_A F-BOX/WD-repeat protein 99.0 6.9E-09 2.4E-13 49.2 7.8 55 2-59 170-224 (435)
129 2ecf_A Dipeptidyl peptidase IV 98.9 7.3E-09 2.5E-13 51.7 6.5 58 6-64 37-124 (741)
130 2ovr_B FBW7, F-BOX/WD repeat p 98.9 7.8E-09 2.7E-13 49.1 6.3 55 2-58 115-169 (445)
131 1p22_A F-BOX/WD-repeat protein 98.9 2.9E-08 9.8E-13 47.2 8.2 56 4-64 132-187 (435)
132 2ojh_A Uncharacterized protein 98.9 2E-08 6.8E-13 44.9 7.4 61 3-64 170-232 (297)
133 3o4h_A Acylamino-acid-releasin 98.9 2.5E-09 8.7E-14 52.2 4.4 60 3-64 192-261 (582)
134 3bws_A Protein LP49; two-domai 98.9 4.2E-08 1.4E-12 46.3 7.8 60 3-64 209-269 (433)
135 2ecf_A Dipeptidyl peptidase IV 98.9 2.8E-08 9.4E-13 49.7 7.2 60 3-64 149-224 (741)
136 1l0q_A Surface layer protein; 98.8 2.5E-07 8.4E-12 43.2 9.5 56 6-63 116-172 (391)
137 1k32_A Tricorn protease; prote 98.8 4.3E-08 1.5E-12 50.9 7.2 60 3-64 418-487 (1045)
138 1xfd_A DIP, dipeptidyl aminope 98.8 1.2E-08 4.3E-13 50.7 4.8 56 7-64 115-188 (723)
139 1nir_A Nitrite reductase; hemo 98.8 2.6E-07 9E-12 45.5 8.7 55 8-64 181-241 (543)
140 3o4h_A Acylamino-acid-releasin 98.8 2.9E-08 9.9E-13 48.6 5.2 54 9-64 153-210 (582)
141 4a5s_A Dipeptidyl peptidase 4 98.7 1.8E-07 6.1E-12 47.3 7.6 61 3-64 109-186 (740)
142 2z3z_A Dipeptidyl aminopeptida 98.7 9.5E-08 3.2E-12 47.7 6.3 57 8-64 183-273 (706)
143 3hfq_A Uncharacterized protein 98.7 4.2E-07 1.4E-11 42.0 7.8 57 7-64 241-301 (347)
144 2z3z_A Dipeptidyl aminopeptida 98.7 1.7E-08 5.8E-13 50.2 3.2 58 5-64 120-196 (706)
145 1z68_A Fibroblast activation p 98.7 9.3E-08 3.2E-12 47.8 5.6 58 6-64 110-184 (719)
146 3pe7_A Oligogalacturonate lyas 98.7 9.1E-08 3.1E-12 44.6 5.2 53 11-64 41-96 (388)
147 3azo_A Aminopeptidase; POP fam 98.7 3E-07 1E-11 45.6 7.1 59 5-64 187-257 (662)
148 1pby_B Quinohemoprotein amine 98.6 7.7E-07 2.6E-11 40.6 7.8 54 7-64 242-295 (337)
149 1xfd_A DIP, dipeptidyl aminope 98.6 2.5E-07 8.4E-12 46.3 6.2 56 9-64 176-270 (723)
150 3azo_A Aminopeptidase; POP fam 98.6 1.2E-07 4.2E-12 47.0 5.1 59 4-64 128-203 (662)
151 2xdw_A Prolyl endopeptidase; a 98.6 2.7E-07 9.1E-12 46.4 6.3 57 6-64 125-186 (710)
152 1ri6_A Putative isomerase YBHE 98.6 7.7E-07 2.6E-11 40.7 7.2 58 5-64 37-99 (343)
153 2gop_A Trilobed protease; beta 98.6 1E-06 3.5E-11 40.6 7.3 55 7-64 60-119 (347)
154 3u4y_A Uncharacterized protein 98.6 1.8E-06 6E-11 39.6 8.0 56 7-64 177-236 (331)
155 2dg1_A DRP35, lactonase; beta 98.6 2.8E-06 9.5E-11 39.1 8.5 58 6-64 45-102 (333)
156 3u4y_A Uncharacterized protein 98.5 2.3E-06 7.7E-11 39.2 7.6 54 10-64 44-99 (331)
157 2bkl_A Prolyl endopeptidase; m 98.5 1.9E-07 6.5E-12 46.9 4.4 59 4-64 119-183 (695)
158 3scy_A Hypothetical bacterial 98.5 4.7E-06 1.6E-10 38.8 8.4 56 7-64 260-321 (361)
159 1pby_B Quinohemoprotein amine 98.5 8.2E-07 2.8E-11 40.5 5.8 56 7-64 83-150 (337)
160 1ri6_A Putative isomerase YBHE 98.5 2.7E-06 9.2E-11 38.9 7.5 56 7-64 232-292 (343)
161 1jmx_B Amine dehydrogenase; ox 98.5 2.6E-06 8.9E-11 39.1 7.4 54 7-64 256-310 (349)
162 3scy_A Hypothetical bacterial 98.5 3.8E-06 1.3E-10 39.1 7.9 58 7-64 212-274 (361)
163 2oiz_A Aromatic amine dehydrog 98.5 2.9E-06 9.8E-11 39.9 7.1 52 8-61 307-360 (361)
164 1z68_A Fibroblast activation p 98.5 4.6E-07 1.6E-11 45.4 4.7 54 9-64 19-75 (719)
165 3vgz_A Uncharacterized protein 98.4 5.1E-06 1.7E-10 38.2 7.3 58 7-64 186-246 (353)
166 1jof_A Carboxy-CIS,CIS-muconat 98.4 1.2E-05 4.2E-10 37.6 8.9 59 6-64 145-208 (365)
167 1nir_A Nitrite reductase; hemo 98.4 1.5E-06 5.3E-11 42.9 5.4 51 13-65 145-195 (543)
168 3vgz_A Uncharacterized protein 98.4 1.1E-05 3.8E-10 37.1 8.0 54 9-64 275-329 (353)
169 3hfq_A Uncharacterized protein 98.4 1.4E-05 4.8E-10 37.0 9.5 58 7-64 142-202 (347)
170 4a5s_A Dipeptidyl peptidase 4 98.3 1.8E-06 6.1E-11 43.8 4.9 56 6-64 17-77 (740)
171 3pe7_A Oligogalacturonate lyas 98.3 1.8E-05 6.2E-10 37.0 7.9 56 8-64 83-140 (388)
172 1jmx_B Amine dehydrogenase; ox 98.3 5.5E-06 1.9E-10 38.0 5.7 54 11-64 5-58 (349)
173 1xip_A Nucleoporin NUP159; bet 98.2 1.1E-05 3.6E-10 38.8 6.4 57 6-64 163-229 (388)
174 2bkl_A Prolyl endopeptidase; m 98.2 1.6E-05 5.6E-10 40.2 7.2 55 9-64 171-242 (695)
175 2xdw_A Prolyl endopeptidase; a 98.2 2.2E-05 7.7E-10 39.8 7.6 57 8-64 173-248 (710)
176 3e5z_A Putative gluconolactona 98.2 1.7E-05 5.8E-10 36.1 6.6 56 6-64 28-84 (296)
177 3fvz_A Peptidyl-glycine alpha- 98.2 5E-05 1.7E-09 35.2 9.0 60 5-64 23-106 (329)
178 2oiz_A Aromatic amine dehydrog 98.1 2.3E-05 7.7E-10 37.0 6.3 51 11-64 259-320 (361)
179 1jof_A Carboxy-CIS,CIS-muconat 98.1 1.4E-05 4.6E-10 37.5 5.3 57 7-64 255-325 (365)
180 3c5m_A Oligogalacturonate lyas 98.1 2.7E-06 9.2E-11 39.7 3.0 56 8-64 38-96 (396)
181 1yr2_A Prolyl oligopeptidase; 98.1 1E-05 3.6E-10 41.1 4.7 55 7-64 164-223 (741)
182 2gop_A Trilobed protease; beta 98.0 3.1E-05 1.1E-09 35.8 5.6 53 8-64 106-185 (347)
183 1qks_A Cytochrome CD1 nitrite 98.0 0.00021 7.1E-09 36.0 9.1 56 7-64 198-259 (567)
184 3g4e_A Regucalcin; six bladed 98.0 0.00013 4.5E-09 33.4 8.5 56 7-63 200-256 (297)
185 3no2_A Uncharacterized protein 97.9 0.00012 4E-09 33.5 6.5 48 16-64 4-52 (276)
186 1pjx_A Dfpase, DIISOPROPYLFLUO 97.9 0.00022 7.5E-09 32.5 8.6 57 6-63 226-282 (314)
187 3iuj_A Prolyl endopeptidase; h 97.9 4.1E-05 1.4E-09 38.9 4.6 58 4-64 127-189 (693)
188 3e5z_A Putative gluconolactona 97.8 0.00027 9.2E-09 32.2 7.1 60 5-64 68-130 (296)
189 1q7f_A NHL, brain tumor CG1071 97.8 0.00029 9.8E-09 31.9 8.8 59 6-65 207-267 (286)
190 3c5m_A Oligogalacturonate lyas 97.8 0.00017 5.7E-09 33.8 5.8 54 7-64 239-298 (396)
191 1q7f_A NHL, brain tumor CG1071 97.7 0.00049 1.7E-08 31.1 8.0 58 6-64 164-222 (286)
192 2mad_H Methylamine dehydrogena 97.7 0.00067 2.3E-08 32.4 7.5 55 10-64 70-140 (373)
193 1xip_A Nucleoporin NUP159; bet 97.7 0.00077 2.6E-08 32.7 7.6 51 5-62 126-176 (388)
194 2dg1_A DRP35, lactonase; beta 97.7 0.00068 2.3E-08 31.3 8.5 59 6-64 87-150 (333)
195 3dsm_A Uncharacterized protein 97.6 0.0011 3.7E-08 30.9 6.9 57 8-64 174-240 (328)
196 1rwi_B Serine/threonine-protei 97.5 0.00092 3.1E-08 29.9 8.1 58 6-64 192-249 (270)
197 1mda_H Methylamine dehydrogena 97.5 0.00024 8.1E-09 34.1 4.0 55 10-64 69-139 (368)
198 3fvz_A Peptidyl-glycine alpha- 97.5 0.0015 5.1E-08 30.4 8.3 58 6-64 143-212 (329)
199 1yr2_A Prolyl oligopeptidase; 97.4 0.0026 8.8E-08 32.8 7.4 55 9-64 212-283 (741)
200 1rwi_B Serine/threonine-protei 97.3 0.0019 6.6E-08 28.8 6.6 57 7-64 151-207 (270)
201 2qe8_A Uncharacterized protein 97.3 0.0028 9.4E-08 29.8 7.0 57 8-64 250-306 (343)
202 3sjl_D Methylamine dehydrogena 97.3 0.00074 2.5E-08 32.7 4.2 55 10-64 82-152 (386)
203 1pjx_A Dfpase, DIISOPROPYLFLUO 97.2 0.003 1E-07 28.8 6.2 58 7-64 19-87 (314)
204 3no2_A Uncharacterized protein 97.2 0.0033 1.1E-07 28.8 7.2 55 7-64 38-92 (276)
205 3dr2_A Exported gluconolactona 97.2 0.0036 1.2E-07 28.8 6.9 55 7-64 46-101 (305)
206 3c75_H MADH, methylamine dehyd 97.2 0.00087 3E-08 32.8 3.9 55 10-64 122-192 (426)
207 3hrp_A Uncharacterized protein 97.2 0.005 1.7E-07 29.8 7.7 56 6-64 131-186 (409)
208 1qks_A Cytochrome CD1 nitrite 97.1 0.0051 1.7E-07 31.2 6.5 45 18-64 168-212 (567)
209 2z2n_A Virginiamycin B lyase; 97.1 0.0041 1.4E-07 28.0 9.2 60 4-64 13-72 (299)
210 2xe4_A Oligopeptidase B; hydro 97.0 0.0011 3.9E-08 34.3 3.8 55 7-64 175-236 (751)
211 2ghs_A AGR_C_1268P; regucalcin 96.9 0.0089 3E-07 27.9 9.4 55 7-63 231-286 (326)
212 2xe4_A Oligopeptidase B; hydro 96.9 0.014 4.8E-07 30.5 6.7 55 10-64 225-286 (751)
213 2mad_H Methylamine dehydrogena 96.7 0.013 4.4E-07 28.1 7.9 52 11-64 272-334 (373)
214 3iuj_A Prolyl endopeptidase; h 96.6 0.016 5.6E-07 29.9 5.9 55 9-64 178-249 (693)
215 3sjl_D Methylamine dehydrogena 96.4 0.028 9.4E-07 27.5 6.3 49 13-64 40-93 (386)
216 1yiq_A Quinohemoprotein alcoho 96.4 0.025 8.6E-07 29.4 5.7 50 15-64 484-533 (689)
217 3g4e_A Regucalcin; six bladed 96.3 0.025 8.4E-07 26.0 8.3 57 6-64 54-113 (297)
218 2ece_A 462AA long hypothetical 96.3 0.037 1.3E-06 27.9 6.8 56 9-64 191-268 (462)
219 3dr2_A Exported gluconolactona 96.2 0.027 9.2E-07 26.0 7.0 58 6-64 86-146 (305)
220 2z2n_A Virginiamycin B lyase; 96.2 0.025 8.5E-07 25.5 8.9 57 6-64 57-114 (299)
221 2ghs_A AGR_C_1268P; regucalcin 96.2 0.03 1E-06 26.2 7.0 56 7-64 91-149 (326)
222 3hrp_A Uncharacterized protein 95.9 0.055 1.9E-06 26.3 8.8 56 7-64 324-395 (409)
223 1fwx_A Nitrous oxide reductase 95.6 0.092 3.2E-06 27.4 6.0 51 8-60 279-342 (595)
224 2qc5_A Streptogramin B lactona 95.6 0.053 1.8E-06 24.5 9.2 58 6-64 20-77 (300)
225 2qc5_A Streptogramin B lactona 95.6 0.055 1.9E-06 24.4 9.2 58 6-64 62-119 (300)
226 2ece_A 462AA long hypothetical 95.6 0.085 2.9E-06 26.6 7.1 58 7-64 322-396 (462)
227 1kb0_A Quinohemoprotein alcoho 95.5 0.1 3.5E-06 27.3 5.7 49 15-63 486-534 (677)
228 3zwu_A Alkaline phosphatase PH 95.4 0.12 4E-06 26.9 8.6 57 8-64 478-546 (592)
229 3dsm_A Uncharacterized protein 95.1 0.1 3.5E-06 24.5 7.4 54 8-64 46-99 (328)
230 2p4o_A Hypothetical protein; p 95.0 0.1 3.5E-06 24.2 8.3 55 7-64 33-87 (306)
231 1fwx_A Nitrous oxide reductase 95.0 0.028 9.6E-07 29.1 2.9 58 7-65 332-404 (595)
232 1mda_H Methylamine dehydrogena 94.9 0.14 4.7E-06 24.9 6.6 50 7-58 315-366 (368)
233 3c75_H MADH, methylamine dehyd 94.7 0.17 5.8E-06 25.2 6.9 46 16-64 83-133 (426)
234 4gq2_M Nucleoporin NUP120; bet 94.7 0.25 8.4E-06 27.1 5.9 37 7-43 237-273 (950)
235 3tc9_A Hypothetical hydrolase; 94.1 0.24 8E-06 24.5 8.5 56 8-63 228-284 (430)
236 2qe8_A Uncharacterized protein 94.0 0.21 7.3E-06 23.6 7.7 57 4-60 65-131 (343)
237 4a9v_A PHOX; hydrolase, beta-p 93.4 0.44 1.5E-05 25.1 8.6 58 7-64 477-546 (592)
238 3qqz_A Putative uncharacterize 93.3 0.28 9.7E-06 22.7 8.5 61 3-64 24-85 (255)
239 4fhn_B Nucleoporin NUP120; pro 93.2 0.28 9.5E-06 27.4 4.4 36 9-44 241-276 (1139)
240 2p4o_A Hypothetical protein; p 92.4 0.41 1.4E-05 22.2 7.2 53 9-63 215-272 (306)
241 1flg_A Protein (quinoprotein e 91.6 0.78 2.7E-05 23.8 5.9 48 17-64 497-544 (582)
242 4hw6_A Hypothetical protein, I 91.3 0.74 2.5E-05 22.9 6.8 54 9-62 231-286 (433)
243 3pbp_A Nucleoporin NUP82; beta 90.7 0.96 3.3E-05 23.1 7.9 57 5-62 124-193 (452)
244 2hz6_A Endoplasmic reticulum t 89.3 1 3.4E-05 21.7 3.8 29 16-44 8-36 (369)
245 1npe_A Nidogen, entactin; glyc 89.1 0.91 3.1E-05 20.5 7.8 54 8-62 38-92 (267)
246 1w6s_A Methanol dehydrogenase 87.7 1.9 6.6E-05 22.6 6.0 48 17-64 484-531 (599)
247 1cru_A Protein (soluble quinop 87.3 1.8 6.2E-05 21.8 8.7 53 7-59 28-87 (454)
248 4hw6_A Hypothetical protein, I 87.2 1.8 6E-05 21.6 7.8 55 7-64 140-197 (433)
249 3tc9_A Hypothetical hydrolase; 87.0 1.8 6.2E-05 21.5 5.9 55 7-63 138-193 (430)
250 3das_A Putative oxidoreductase 86.8 1.8 6E-05 21.2 7.9 53 7-59 33-90 (347)
251 3nol_A Glutamine cyclotransfer 86.1 1.7 5.9E-05 20.5 7.8 53 11-64 177-240 (262)
252 2ad6_A Methanol dehydrogenase 86.0 2.4 8.2E-05 22.0 6.0 48 17-64 475-522 (571)
253 1kv9_A Type II quinohemoprotei 85.8 2.7 9.1E-05 22.3 5.4 30 16-45 468-497 (668)
254 3kya_A Putative phosphatase; s 84.8 2.8 9.5E-05 21.7 6.4 54 9-62 250-323 (496)
255 3f7f_A Nucleoporin NUP120; nuc 83.9 3.8 0.00013 22.5 6.0 29 16-44 230-258 (729)
256 1tl2_A L10, protein (tachylect 83.9 2.3 7.7E-05 19.9 5.1 56 7-64 42-103 (236)
257 2g8s_A Glucose/sorbosone dehyd 82.8 2.8 9.6E-05 20.2 5.7 51 7-59 19-76 (353)
258 3qqz_A Putative uncharacterize 80.1 3.3 0.00011 19.3 7.1 58 6-64 173-239 (255)
259 2p9w_A MAL S 1 allergenic prot 79.3 4.2 0.00014 20.0 7.4 57 7-64 138-200 (334)
260 3a9g_A Putative uncharacterize 79.3 4 0.00014 19.8 6.4 51 7-59 30-83 (354)
261 2fp8_A Strictosidine synthase; 77.7 4.1 0.00014 19.0 7.6 54 8-63 128-199 (322)
262 2iwa_A Glutamine cyclotransfer 77.6 4.3 0.00015 19.1 7.8 37 8-44 23-61 (266)
263 3nok_A Glutaminyl cyclase; bet 75.9 5.1 0.00017 19.1 7.2 54 9-63 184-249 (268)
264 1npe_A Nidogen, entactin; glyc 75.7 4.4 0.00015 18.3 8.0 54 7-61 80-134 (267)
265 2ism_A Putative oxidoreductase 73.4 6.3 0.00022 19.0 8.6 50 7-59 32-85 (352)
266 3hxj_A Pyrrolo-quinoline quino 72.3 5.9 0.0002 18.3 4.9 24 13-40 184-207 (330)
267 3mbr_X Glutamine cyclotransfer 62.1 11 0.00038 17.6 8.0 54 10-64 154-219 (243)
268 3v65_B Low-density lipoprotein 59.0 15 0.00051 18.1 7.1 32 7-38 117-149 (386)
269 1n7d_A LDL receptor, low-densi 56.1 23 0.00077 19.3 4.0 49 10-59 457-506 (699)
270 3q7m_A Lipoprotein YFGL, BAMB; 54.5 17 0.00058 17.4 4.9 27 18-44 319-345 (376)
271 2wg3_C Hedgehog-interacting pr 51.9 24 0.00081 18.2 5.7 53 7-59 15-79 (463)
272 2xzh_A Clathrin heavy chain 1; 51.7 23 0.00078 18.0 8.0 43 10-53 264-306 (365)
273 3sre_A PON1, serum paraoxonase 50.9 22 0.00076 17.6 7.6 56 7-64 222-282 (355)
274 3p5b_L Low density lipoprotein 50.1 23 0.00079 17.6 8.1 53 8-61 161-214 (400)
275 3v64_C Agrin; beta propeller, 49.6 22 0.00075 17.2 7.4 51 8-59 75-126 (349)
276 1k3i_A Galactose oxidase precu 48.1 30 0.001 18.4 6.6 28 11-38 248-276 (656)
277 3s25_A Hypothetical 7-bladed b 47.4 23 0.0008 16.9 2.6 13 12-24 110-122 (302)
278 3sbq_A Nitrous-oxide reductase 45.3 34 0.0012 18.9 3.0 25 20-44 73-97 (638)
279 2loj_A Putative cytoplasmic pr 38.8 19 0.00063 13.3 1.9 19 47-65 44-62 (63)
280 3m0c_C LDL receptor, low-densi 38.5 53 0.0018 18.5 7.8 52 8-60 473-525 (791)
281 1bpo_A Protein (clathrin); cla 37.5 49 0.0017 17.7 8.7 45 9-54 262-306 (494)
282 1ijq_A LDL receptor, low-densi 36.8 37 0.0013 16.1 8.8 55 8-63 122-178 (316)
283 2xbg_A YCF48-like protein; pho 35.8 39 0.0013 16.1 9.2 56 6-63 163-219 (327)
284 2ldu_A Heat shock factor prote 35.2 29 0.00099 14.5 1.8 12 52-63 35-46 (125)
285 3sov_A LRP-6, low-density lipo 33.1 45 0.0015 16.0 6.7 49 10-59 83-132 (318)
286 1hks_A Heat-shock transcriptio 29.4 22 0.00075 14.3 0.8 12 52-63 22-33 (106)
287 1ukf_A Avirulence protein AVRP 28.6 50 0.0017 15.1 3.7 34 6-39 119-153 (188)
288 2dk7_A Transcription elongatio 28.5 33 0.0011 13.0 3.2 25 14-38 17-41 (73)
289 3s94_A LRP-6, low-density lipo 27.4 80 0.0027 17.1 6.8 52 7-59 85-137 (619)
290 3u0a_A Acyl-COA thioesterase I 26.6 54 0.0018 15.7 1.9 10 29-39 255-264 (285)
291 3mwp_A Nucleoprotein; structur 25.5 21 0.00071 18.9 0.5 18 22-39 162-179 (577)
292 2jra_A Protein RPA2121; domain 25.4 38 0.0013 12.7 3.0 17 4-20 48-64 (67)
293 1zso_A Hypothetical protein; s 24.9 56 0.0019 14.5 4.5 29 8-36 112-140 (164)
294 3rd7_A Acyl-COA thioesterase; 24.6 39 0.0013 16.1 1.3 14 29-43 262-275 (286)
295 3q7x_A De novo designed beta-t 21.9 59 0.002 13.6 1.7 8 11-18 19-26 (132)
296 4a0p_A LRP6, LRP-6, low-densit 21.3 1.1E+02 0.0038 16.6 7.8 55 7-62 390-446 (628)
297 3p6j_A De novo designed beta-t 21.2 65 0.0022 13.8 1.9 11 53-63 127-137 (142)
No 1
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.78 E-value=4e-18 Score=79.04 Aligned_cols=63 Identities=13% Similarity=0.090 Sum_probs=56.9
Q ss_pred ccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 3 AHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 3 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
+|...|.+++|+|+++++++++.|+.+++|++.+++.+..+...|...|.+++|+|++++|+|
T Consensus 267 ~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS 329 (365)
T 4h5i_A 267 NRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVAS 329 (365)
T ss_dssp SSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEE
T ss_pred CCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEE
Confidence 567789999999999999999999999999999999888764338999999999999999975
No 2
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.75 E-value=1.9e-17 Score=79.47 Aligned_cols=63 Identities=30% Similarity=0.542 Sum_probs=57.7
Q ss_pred CCccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 1 l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
|++|.+.|.+++|+|+++++++++.++.+++|+. +++.+..+.+ |...|.+++|+|+++++++
T Consensus 12 L~GH~~~V~~~a~spdg~~las~~~d~~v~iWd~-~~~~~~~l~g-h~~~V~~l~fspdg~~las 74 (577)
T 2ymu_A 12 LEAHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTG-HSSSVWGVAFSPDGQTIAS 74 (577)
T ss_dssp ECCCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEEC-CSSCEEEEEECTTSSEEEE
T ss_pred ECCCCCcEEEEEECCCCCEEEEEeCCCEEEEEEC-CCCEEEEEeC-CCCCEEEEEECCCCCEEEE
Confidence 5689999999999999999999999999999995 6778888888 9999999999999999874
No 3
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.71 E-value=4.1e-16 Score=70.96 Aligned_cols=64 Identities=20% Similarity=0.369 Sum_probs=54.5
Q ss_pred CCccccceEEEEECCC-CCEEEEecCCCcEEEEECCCCc-----eEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 1 MAAHRAYGLHCVFSPD-CRLLATTSADQTARIWNTEDFS-----LVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 1 l~~~~~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
|++|.+.|.+++|+|+ ++++++++.|+.+++|++.... ....+.+ |...|.+++|+|+++++++
T Consensus 34 L~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~-h~~~V~~~~~s~dg~~l~s 103 (340)
T 4aow_A 34 LKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRG-HSHFVSDVVISSDGQFALS 103 (340)
T ss_dssp ECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECC-CSSCEEEEEECTTSSEEEE
T ss_pred ECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeC-CCCCEEEEEECCCCCEEEE
Confidence 5789999999999997 5899999999999999987532 3445666 8999999999999998864
No 4
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.70 E-value=7.8e-16 Score=71.20 Aligned_cols=64 Identities=30% Similarity=0.294 Sum_probs=57.9
Q ss_pred CccccceEEEEECCCCCEEEEecCCCc-EEEEECCCCceEEEeec-cCCCcEeEEEEccCCcEEeC
Q psy7061 2 AAHRAYGLHCVFSPDCRLLATTSADQT-ARIWNTEDFSLVRELGT-ANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 2 ~~~~~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~i~s 65 (65)
.+|...|.++.|+|+++++++++.|+. +++|++.+++.+..+.. .|...|.+++|+|+++++++
T Consensus 192 ~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s 257 (355)
T 3vu4_A 192 KAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAV 257 (355)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEE
T ss_pred EccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEE
Confidence 468899999999999999999999998 99999999999888873 37899999999999998874
No 5
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.69 E-value=2.2e-16 Score=73.45 Aligned_cols=64 Identities=16% Similarity=0.317 Sum_probs=59.1
Q ss_pred CCccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 1 l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
|++|.+.|.++.|+|+++++++++.|+.+++|+..++.....+.. |...|.+++|+|+++++++
T Consensus 62 l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~-h~~~v~~~~~s~~g~~las 125 (380)
T 3iz6_a 62 LQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKL-HCPWVMECAFAPNGQSVAC 125 (380)
T ss_dssp ECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEEC-CCTTCCCCEECTTSSEEEE
T ss_pred ccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEec-CCCCEEEEEECCCCCEEEE
Confidence 468999999999999999999999999999999999988888888 8899999999999998874
No 6
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.68 E-value=1.5e-15 Score=69.54 Aligned_cols=63 Identities=19% Similarity=0.469 Sum_probs=58.4
Q ss_pred CccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 2 AAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 2 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
.+|...|..+.|+|++..+++++.|+.+++|++.++..+..+.. |...|.+++|+|+++.+++
T Consensus 245 ~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~-h~~~v~~v~~s~~g~~l~s 307 (321)
T 3ow8_A 245 SGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFD-HQDQVWGVKYNGNGSKIVS 307 (321)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECC-CSSCEEEEEECTTSSEEEE
T ss_pred cCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcC-CCCcEEEEEECCCCCEEEE
Confidence 46888999999999999999999999999999999999988888 8999999999999998874
No 7
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.68 E-value=1.5e-15 Score=69.88 Aligned_cols=63 Identities=21% Similarity=0.344 Sum_probs=58.3
Q ss_pred CccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 2 AAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 2 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
.+|...|.++.|+|++..+++++.|+.+++|+++++..+..+.. |...|.+++|+|+++++++
T Consensus 73 ~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~-h~~~v~~v~~sp~~~~l~s 135 (343)
T 2xzm_R 73 TGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVG-HQSEVYSVAFSPDNRQILS 135 (343)
T ss_dssp CCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEEC-CCSCEEEEEECSSTTEEEE
T ss_pred ccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcC-CCCcEEEEEECCCCCEEEE
Confidence 46888999999999999999999999999999999998888888 8999999999999998864
No 8
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.66 E-value=3.2e-15 Score=68.73 Aligned_cols=64 Identities=22% Similarity=0.382 Sum_probs=58.6
Q ss_pred CCccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 1 l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
|.+|.+.|.++.|+|+++.+++++.|+.+++|+..++..+..+.. |...+.+++|+|+++++++
T Consensus 51 l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~s 114 (340)
T 1got_B 51 LRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPL-RSSWVMTCAYAPSGNYVAC 114 (340)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEEC-SSSCEEEEEECTTSSEEEE
T ss_pred ecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeec-CCccEEEEEECCCCCEEEE
Confidence 357999999999999999999999999999999999888888887 8899999999999998864
No 9
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.66 E-value=3.8e-15 Score=67.59 Aligned_cols=64 Identities=28% Similarity=0.436 Sum_probs=58.5
Q ss_pred CCccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 1 l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
+.+|...|.++.|+|+++.+++++.++.+++|+..+++....+.. |...+.+++|+|+++++++
T Consensus 19 ~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~s 82 (312)
T 4ery_A 19 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISG-HKLGISDVAWSSDSNLLVS 82 (312)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECC-CSSCEEEEEECTTSSEEEE
T ss_pred EcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhcc-CCCceEEEEEcCCCCEEEE
Confidence 357899999999999999999999999999999998888888887 8999999999999998864
No 10
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.66 E-value=1.5e-15 Score=71.29 Aligned_cols=63 Identities=25% Similarity=0.422 Sum_probs=58.4
Q ss_pred CccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 2 AAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 2 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
.+|...|.++.|+|++..+++++.|+.+++|++.++.....+.+ |...|.+++|+|+++++++
T Consensus 105 ~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~-h~~~V~~v~~~~~~~~l~s 167 (410)
T 1vyh_C 105 SGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKG-HTDSVQDISFDHSGKLLAS 167 (410)
T ss_dssp ECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECC-CSSCEEEEEECTTSSEEEE
T ss_pred cccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEec-cCCcEEEEEEcCCCCEEEE
Confidence 46889999999999999999999999999999999988888888 8999999999999998864
No 11
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.66 E-value=3.3e-15 Score=68.25 Aligned_cols=63 Identities=14% Similarity=0.258 Sum_probs=58.4
Q ss_pred CccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 2 AAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 2 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
++|...|..+.|+|+++.+++++.|+.+++|++.+++.+..+.. |...|.+++|+|++..+++
T Consensus 62 ~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~s 124 (319)
T 3frx_A 62 KGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVG-HKSDVMSVDIDKKASMIIS 124 (319)
T ss_dssp ECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEEC-CSSCEEEEEECTTSCEEEE
T ss_pred eCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEcc-CCCcEEEEEEcCCCCEEEE
Confidence 46888999999999999999999999999999999999888888 8999999999999988764
No 12
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.65 E-value=1.5e-15 Score=68.98 Aligned_cols=63 Identities=17% Similarity=0.208 Sum_probs=58.1
Q ss_pred CccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 2 AAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 2 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
++|...|.+++|+|+++.+++++.++.+++|++.++..+..+.. |...+.+++|+|+++++++
T Consensus 10 ~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~s 72 (304)
T 2ynn_A 10 SNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQV-TETPVRAGKFIARKNWIIV 72 (304)
T ss_dssp EEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEEC-CSSCEEEEEEEGGGTEEEE
T ss_pred cCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeec-cCCcEEEEEEeCCCCEEEE
Confidence 46888999999999999999999999999999999998888888 8899999999999988764
No 13
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.65 E-value=3.7e-15 Score=68.24 Aligned_cols=64 Identities=17% Similarity=0.297 Sum_probs=58.9
Q ss_pred CCccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 1 l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
|.+|...|.++.|+|+++.+++++.++.+++|++.++..+..+.. |...+.+++|+|+++++++
T Consensus 28 l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~s 91 (369)
T 3zwl_B 28 LTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDG-HTGTIWSIDVDCFTKYCVT 91 (369)
T ss_dssp EECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECC-CSSCEEEEEECTTSSEEEE
T ss_pred EEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhh-cCCcEEEEEEcCCCCEEEE
Confidence 357999999999999999999999999999999999999888888 8999999999999988864
No 14
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.65 E-value=3.6e-15 Score=68.31 Aligned_cols=63 Identities=29% Similarity=0.467 Sum_probs=57.8
Q ss_pred CccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 2 AAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 2 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
.+|...|.++.|+|+++.+++++.++.+++|+++.+.....+.. |...|.+++|+|+++++++
T Consensus 203 ~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~-h~~~v~~~~~sp~~~~l~s 265 (321)
T 3ow8_A 203 EGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSG-HASWVLNVAFCPDDTHFVS 265 (321)
T ss_dssp CCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECC-CSSCEEEEEECTTSSEEEE
T ss_pred cccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcC-CCCceEEEEECCCCCEEEE
Confidence 46788899999999999999999999999999999888888888 8999999999999998864
No 15
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.64 E-value=8.2e-15 Score=67.40 Aligned_cols=63 Identities=16% Similarity=0.303 Sum_probs=58.1
Q ss_pred CccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 2 AAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 2 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
.+|.+.|.++.|+|+++.+++++.++.+++|+++++.....+.. |...|.+++|+|+++.+++
T Consensus 181 ~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~-h~~~v~~v~~~p~~~~l~s 243 (340)
T 1got_B 181 TGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTG-HESDINAICFFPNGNAFAT 243 (340)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECC-CSSCEEEEEECTTSSEEEE
T ss_pred cCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcC-CcCCEEEEEEcCCCCEEEE
Confidence 46888999999999999999999999999999999988888888 8999999999999998864
No 16
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.63 E-value=6.1e-15 Score=68.23 Aligned_cols=64 Identities=16% Similarity=0.244 Sum_probs=57.8
Q ss_pred CCccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 1 l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
|++|...|.++.|+|+++.+++++.|+.+++|+..++.....+.. +...+.+++|+|++..+++
T Consensus 60 l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~-~~~~v~~~~~sp~g~~las 123 (354)
T 2pbi_B 60 LKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTM-PCTWVMACAYAPSGCAIAC 123 (354)
T ss_dssp EECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEEC-SSSCCCEEEECTTSSEEEE
T ss_pred ecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEec-CCCCEEEEEECCCCCEEEE
Confidence 357999999999999999999999999999999998888777777 7889999999999998864
No 17
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.63 E-value=8.2e-15 Score=67.82 Aligned_cols=59 Identities=10% Similarity=0.054 Sum_probs=55.2
Q ss_pred ccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcE
Q psy7061 3 AHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKF 62 (65)
Q Consensus 3 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 62 (65)
+|...|.++.|+|+++.+++++.++.+++|++.+++.+..+.+ |...|.+++|+|++..
T Consensus 125 ~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~-h~~~V~~~~~~~~~~~ 183 (344)
T 4gqb_B 125 EHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRA-HAAQVTCVAASPHKDS 183 (344)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECC-CSSCEEEEEECSSCTT
T ss_pred CCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcC-cCCceEEEEecCCCCC
Confidence 6888999999999999999999999999999999999999988 9999999999998753
No 18
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.62 E-value=1.1e-14 Score=71.13 Aligned_cols=64 Identities=20% Similarity=0.289 Sum_probs=56.9
Q ss_pred CccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeec------cCCCcEeEEEEccCCcEEeC
Q psy7061 2 AAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGT------ANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 2 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~i~s 65 (65)
.+|...|.++.|+|+++.+++++.|+.+++|+..+++.+..+.. .|...|.+++|+|+++++++
T Consensus 187 ~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s 256 (611)
T 1nr0_A 187 GEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIAS 256 (611)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEE
T ss_pred ccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEE
Confidence 56889999999999999999999999999999998888777631 28899999999999998874
No 19
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.62 E-value=1.6e-14 Score=66.25 Aligned_cols=63 Identities=22% Similarity=0.271 Sum_probs=50.9
Q ss_pred CccccceEEEEECCCCCEEEEecCCCcEEEEECCCC----ceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 2 AAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDF----SLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 2 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
.+|...|.++.|+|+++.+++++.|+.+++|+++.. +.+..+.. |...|.+++|+|++.++++
T Consensus 104 ~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~-h~~~v~~v~~~p~~~~l~s 170 (330)
T 2hes_X 104 EGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQE-HSQDVKHVIWHPSEALLAS 170 (330)
T ss_dssp C----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECC-CSSCEEEEEECSSSSEEEE
T ss_pred cCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEecc-CCCceEEEEECCCCCEEEE
Confidence 468889999999999999999999999999999532 34556666 8899999999999998874
No 20
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.61 E-value=6.3e-15 Score=69.23 Aligned_cols=63 Identities=21% Similarity=0.369 Sum_probs=58.2
Q ss_pred CccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 2 AAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 2 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
++|...|.++.|+|+++.+++++.|+.+++|++.....+..+.+ |...|.+++|+|++.++++
T Consensus 147 ~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~-h~~~V~~v~~~p~~~~l~s 209 (410)
T 1vyh_C 147 KGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHG-HDHNVSSVSIMPNGDHIVS 209 (410)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCCC-CSSCEEEEEECSSSSEEEE
T ss_pred eccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcC-CCCCEEEEEEeCCCCEEEE
Confidence 57889999999999999999999999999999999888888888 8999999999999988864
No 21
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.61 E-value=3e-14 Score=65.70 Aligned_cols=63 Identities=25% Similarity=0.298 Sum_probs=55.3
Q ss_pred CccccceEEEEECCCCCEEEEecCCCcEEEEECCCC--ceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 2 AAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDF--SLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 2 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
.+|...|.++.|+|+++.+++++.|+.+++|+.... ..+..+.+ |...|.+++|+|+++++++
T Consensus 58 ~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~-h~~~v~~v~~sp~~~~l~s 122 (345)
T 3fm0_A 58 EGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEG-HENEVKSVAWAPSGNLLAT 122 (345)
T ss_dssp SSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECC-CSSCEEEEEECTTSSEEEE
T ss_pred cccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccC-CCCCceEEEEeCCCCEEEE
Confidence 468889999999999999999999999999998765 34566777 8999999999999998874
No 22
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.61 E-value=1.6e-14 Score=69.54 Aligned_cols=63 Identities=27% Similarity=0.460 Sum_probs=56.0
Q ss_pred CCccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 1 l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
|.+|...|.++.|+|+++++++++.|+.+++|+. +++.+..+.. |...|.+++|+|+++++++
T Consensus 53 l~gh~~~V~~l~fspdg~~las~~~d~~i~vWd~-~~~~~~~~~~-~~~~v~~~~~s~d~~~l~~ 115 (577)
T 2ymu_A 53 LTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTG-HSSSVRGVAFSPDGQTIAS 115 (577)
T ss_dssp EECCSSCEEEEEECTTSSEEEEEETTSCEEEEET-TSCEEEEECC-CSSCEEEEEECTTSSEEEE
T ss_pred EeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEEC-CCCEEEEEEC-CCCCEEEEEECCCCCEEEE
Confidence 3578999999999999999999999999999996 4677778887 8999999999999998864
No 23
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.60 E-value=1.4e-14 Score=71.42 Aligned_cols=63 Identities=22% Similarity=0.341 Sum_probs=58.3
Q ss_pred CccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 2 AAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 2 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
.+|...|.++.|+|+++.+++++.|+.+++|++.++.....+.. |...|.+++|+|+++.++|
T Consensus 427 ~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~-h~~~v~~~~~s~~~~~l~s 489 (694)
T 3dm0_A 427 TGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVG-HTKDVLSVAFSLDNRQIVS 489 (694)
T ss_dssp ECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEEC-CSSCEEEEEECTTSSCEEE
T ss_pred cCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEeC-CCCCEEEEEEeCCCCEEEE
Confidence 46888999999999999999999999999999999998888888 8999999999999988764
No 24
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.60 E-value=2.8e-14 Score=66.62 Aligned_cols=63 Identities=27% Similarity=0.253 Sum_probs=58.0
Q ss_pred CccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 2 AAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 2 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
.+|...|.++.|+|+++.+++++.++.+++|++.+++.+..+.. |...|.+++|+|+++.+++
T Consensus 136 ~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~s 198 (420)
T 3vl1_A 136 QAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIG-HRATVTDIAIIDRGRNVLS 198 (420)
T ss_dssp TSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEEC-CSSCEEEEEEETTTTEEEE
T ss_pred ccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcC-CCCcEEEEEEcCCCCEEEE
Confidence 57889999999999999999999999999999999888888888 8999999999999998864
No 25
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.60 E-value=2e-14 Score=65.85 Aligned_cols=59 Identities=14% Similarity=0.158 Sum_probs=54.5
Q ss_pred cceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 6 AYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 6 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
..+.++.|+|+++.+++++.++.+++|++.++..+..+.. |...+.+++|+|+++++++
T Consensus 274 ~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~-~~~~v~~~~~s~~g~~l~~ 332 (368)
T 3mmy_A 274 YAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQ-LDQPISACCFNHNGNIFAY 332 (368)
T ss_dssp CCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCC-CSSCEEEEEECTTSSCEEE
T ss_pred cceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecC-CCCCceEEEECCCCCeEEE
Confidence 3799999999999999999999999999999999888888 8999999999999998874
No 26
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.59 E-value=1.6e-14 Score=65.61 Aligned_cols=62 Identities=13% Similarity=0.133 Sum_probs=57.2
Q ss_pred ccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 3 AHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 3 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
.|...+..+.|+|+++.+++++.|+.+++|++.+++.+..+.. |...|.+++|+|+++++++
T Consensus 53 ~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~s 114 (304)
T 2ynn_A 53 VTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEA-HPDYIRSIAVHPTKPYVLS 114 (304)
T ss_dssp CCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEEC-CSSCEEEEEECSSSSEEEE
T ss_pred ccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEEEEeC-CCCcEEEEEEcCCCCEEEE
Confidence 4677899999999999999999999999999999999988888 8999999999999998864
No 27
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.59 E-value=3.7e-14 Score=64.33 Aligned_cols=64 Identities=14% Similarity=0.169 Sum_probs=54.6
Q ss_pred CCccccceEEEEECCCCCEEEEecCCCcEEEEECCCC----ceEEEeeccCCCcEeEEEEcc--CCcEEeC
Q psy7061 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDF----SLVRELGTANQRWVWDAAFTL--DSKFLLT 65 (65)
Q Consensus 1 l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~v~~~~~~~--~~~~i~s 65 (65)
+.+|...|.++.|+|+++.+++++.++.+++|++..+ .....+.. |...|.+++|+| ++.++++
T Consensus 7 ~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~d~~~l~s 76 (351)
T 3f3f_A 7 DSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRA-HDSSIVAIDWASPEYGRIIAS 76 (351)
T ss_dssp ECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEEC-CSSCEEEEEECCGGGCSEEEE
T ss_pred CcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceecc-CCCcEEEEEEcCCCCCCEEEE
Confidence 3579999999999999999999999999999999865 34555666 899999999999 5777763
No 28
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.59 E-value=6.5e-14 Score=63.56 Aligned_cols=63 Identities=22% Similarity=0.426 Sum_probs=57.8
Q ss_pred CccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 2 AAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 2 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
.+|...|..+.|+|+++.+++++.++.+++|++.+++.+..+.. |...+.+++|+|++.++++
T Consensus 62 ~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~s 124 (312)
T 4ery_A 62 SGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKG-HSNYVFCCNFNPQSNLIVS 124 (312)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEEC-CSSCEEEEEECSSSSEEEE
T ss_pred ccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEEcC-CCCCEEEEEEcCCCCEEEE
Confidence 46888899999999999999999999999999999998888888 8999999999999988864
No 29
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.58 E-value=5.7e-14 Score=63.69 Aligned_cols=64 Identities=23% Similarity=0.331 Sum_probs=54.6
Q ss_pred CCccccceEEEEECCCCCEEEEecCCCcEEEEECCC--CceEEEeeccCCCcEeEEEEccC--CcEEeC
Q psy7061 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTED--FSLVRELGTANQRWVWDAAFTLD--SKFLLT 65 (65)
Q Consensus 1 l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~v~~~~~~~~--~~~i~s 65 (65)
+.+|...|.++.|+|+++.+++++.|+.+++|++.. .+.+..+.+ |...|.+++|+|. ++.++|
T Consensus 5 ~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~g-H~~~V~~v~~s~~~~g~~l~s 72 (297)
T 2pm7_B 5 ANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTG-HEGPVWRVDWAHPKFGTILAS 72 (297)
T ss_dssp CCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECC-CSSCEEEEEECCGGGCSEEEE
T ss_pred ccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEcc-ccCCeEEEEecCCCcCCEEEE
Confidence 467999999999999999999999999999999874 356677777 8999999999763 777663
No 30
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.58 E-value=8.4e-14 Score=68.05 Aligned_cols=64 Identities=16% Similarity=0.306 Sum_probs=57.5
Q ss_pred CCccccceEEEEECCCCC-EEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 1 MAAHRAYGLHCVFSPDCR-LLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 1 l~~~~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
+.+|...|..+.|+|++. .+++++.|+.+++|+....+....+.+ |...|.+++|+|+++++++
T Consensus 143 l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~-H~~~V~~v~fspdg~~las 207 (611)
T 1nr0_A 143 LTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGE-HTKFVHSVRYNPDGSLFAS 207 (611)
T ss_dssp CCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECC-CSSCEEEEEECTTSSEEEE
T ss_pred ecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeecc-ccCceEEEEECCCCCEEEE
Confidence 357889999999999886 699999999999999988888888888 8999999999999998874
No 31
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.58 E-value=3.9e-14 Score=65.69 Aligned_cols=62 Identities=23% Similarity=0.266 Sum_probs=52.9
Q ss_pred CccccceEEEEECCCC-CEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEcc-CCcEEeC
Q psy7061 2 AAHRAYGLHCVFSPDC-RLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTL-DSKFLLT 65 (65)
Q Consensus 2 ~~~~~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~i~s 65 (65)
.+|...|..+.|+|++ +++++++.|+.+++|++++++.+..+ . |...|.+++|+| ++++++|
T Consensus 266 ~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~-~-H~~~V~~vafsP~d~~~l~s 329 (357)
T 4g56_B 266 AVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDL-S-HRDFVTGVAWSPLDHSKFTT 329 (357)
T ss_dssp CCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEEC-C-CSSCEEEEEECSSSTTEEEE
T ss_pred eccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC-C-CCCCEEEEEEeCCCCCEEEE
Confidence 4678899999999986 57899999999999999988776554 5 899999999998 7887764
No 32
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.57 E-value=5.2e-14 Score=64.91 Aligned_cols=63 Identities=21% Similarity=0.334 Sum_probs=54.1
Q ss_pred CccccceEEEEECCCCCEEEEecCCCcEEEEECCCCc---eEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 2 AAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFS---LVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 2 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
.+|...|.++.|+|+++.+++++.|+.+++|+++... .+..+.. |...|.+++|+|+++++++
T Consensus 102 ~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~-h~~~v~~~~~~p~~~~l~s 167 (345)
T 3fm0_A 102 EGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNS-HTQDVKHVVWHPSQELLAS 167 (345)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECC-CCSCEEEEEECSSSSCEEE
T ss_pred cCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecC-cCCCeEEEEECCCCCEEEE
Confidence 5788999999999999999999999999999998653 3445556 8899999999999988764
No 33
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.57 E-value=9.5e-14 Score=63.51 Aligned_cols=61 Identities=25% Similarity=0.316 Sum_probs=54.8
Q ss_pred CccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 2 AAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 2 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
.+|...|..+.|+|+++.+++++.|+.+++|++..++.+..+.. ...+.+++|+|++..++
T Consensus 193 ~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~--~~~v~~~~~sp~~~~la 253 (319)
T 3frx_A 193 IGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSA--QDEVFSLAFSPNRYWLA 253 (319)
T ss_dssp CCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEEC--CSCEEEEEECSSSSEEE
T ss_pred cCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecC--CCcEEEEEEcCCCCEEE
Confidence 46888999999999999999999999999999999888877774 56899999999998875
No 34
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.56 E-value=1.3e-13 Score=63.34 Aligned_cols=61 Identities=28% Similarity=0.405 Sum_probs=48.6
Q ss_pred cccceEEEEECCCCCEEEEecCCCcEEEEECCC-------CceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 4 HRAYGLHCVFSPDCRLLATTSADQTARIWNTED-------FSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 4 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
|...|.++.|+|+++.+++++.|+.+++|+... ...+..+.+ |...|.+++|+|+++++++
T Consensus 57 h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~-h~~~V~~v~~sp~g~~las 124 (330)
T 2hes_X 57 HKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEG-HENEVKGVAWSNDGYYLAT 124 (330)
T ss_dssp CCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC-----CEEEEEECTTSCEEEE
T ss_pred ccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcC-CCCcEEEEEECCCCCEEEE
Confidence 888999999999999999999999999999853 234556666 8999999999999998874
No 35
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.56 E-value=1.2e-13 Score=63.32 Aligned_cols=64 Identities=19% Similarity=0.197 Sum_probs=54.9
Q ss_pred CCccccceEEEEECCC---CCEEEEecCCCcEEEEECCC-CceE-EEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 1 MAAHRAYGLHCVFSPD---CRLLATTSADQTARIWNTED-FSLV-RELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 1 l~~~~~~v~~~~~~~~---~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
+.+|.+.|.++.|+|+ ++.+++++.++.+++|++.+ +..+ ..+.. |...|.+++|+|+++++++
T Consensus 35 ~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~s 103 (368)
T 3mmy_A 35 TSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQM-HTGPVLDVCWSDDGSKVFT 103 (368)
T ss_dssp SSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEE-CSSCEEEEEECTTSSEEEE
T ss_pred ccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEecc-ccCCEEEEEECcCCCEEEE
Confidence 3578999999999998 58999999999999999986 5554 55666 8999999999999998864
No 36
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.56 E-value=1e-13 Score=71.33 Aligned_cols=63 Identities=24% Similarity=0.351 Sum_probs=58.7
Q ss_pred CccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 2 AAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 2 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
.+|...|.++.|+|+++.+++++.++.+++|+..++..+..+.. |...|.+++|+|+++++++
T Consensus 612 ~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~-h~~~v~~~~~s~~~~~l~s 674 (1249)
T 3sfz_A 612 RPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKA-HEDEVLCCAFSSDDSYIAT 674 (1249)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECC-CSSCEEEEEECTTSSEEEE
T ss_pred ecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEecc-CCCCEEEEEEecCCCEEEE
Confidence 46889999999999999999999999999999999999888888 8999999999999998874
No 37
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.56 E-value=8.4e-14 Score=66.15 Aligned_cols=63 Identities=13% Similarity=0.076 Sum_probs=54.4
Q ss_pred CccccceEEEEECCC-CCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 2 AAHRAYGLHCVFSPD-CRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 2 ~~~~~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
.+|...|..+.|+|+ +..+++++.++.+++|+++++........ |...+.+++|+|+++++++
T Consensus 146 ~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~-~~~~v~~v~wspdg~~las 209 (434)
T 2oit_A 146 KDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLP-STVAVTSVCWSPKGKQLAV 209 (434)
T ss_dssp CSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEEC-GGGCEEEEEECTTSSCEEE
T ss_pred CCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccC-CCCceeEEEEcCCCCEEEE
Confidence 457889999999997 78999999999999999998866655555 7889999999999988864
No 38
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.56 E-value=4.9e-14 Score=65.28 Aligned_cols=60 Identities=25% Similarity=0.287 Sum_probs=51.5
Q ss_pred CccccceEEEEECCCC-CEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEE
Q psy7061 2 AAHRAYGLHCVFSPDC-RLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFL 63 (65)
Q Consensus 2 ~~~~~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i 63 (65)
.+|...|.++.|+|++ +++++++.|+.+++|+...++.. .+.+ |...|.+++|+|++..+
T Consensus 254 ~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~-~~~~-H~~~V~~v~~sp~~~~l 314 (344)
T 4gqb_B 254 AVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELF-RSQA-HRDFVRDATWSPLNHSL 314 (344)
T ss_dssp ECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEE-EECC-CSSCEEEEEECSSSTTE
T ss_pred cCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEE-EEcC-CCCCEEEEEEeCCCCeE
Confidence 4688899999999987 57899999999999999887765 4566 89999999999998654
No 39
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.55 E-value=4.9e-14 Score=69.95 Aligned_cols=63 Identities=19% Similarity=0.215 Sum_probs=58.2
Q ss_pred CccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 2 AAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 2 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
.+|.+.|.+++|+|+++++++++.++.+++|+..++..+..+.. |...|.+++|+|+++++++
T Consensus 10 ~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~ 72 (814)
T 3mkq_A 10 SNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQV-TETPVRAGKFIARKNWIIV 72 (814)
T ss_dssp EEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEEC-CSSCEEEEEEEGGGTEEEE
T ss_pred ecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEec-CCCcEEEEEEeCCCCEEEE
Confidence 46889999999999999999999999999999999998888888 8999999999999998864
No 40
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.55 E-value=2.1e-14 Score=67.22 Aligned_cols=63 Identities=14% Similarity=0.090 Sum_probs=54.4
Q ss_pred CCccccceEEEEECC--------CCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCc-EEe
Q psy7061 1 MAAHRAYGLHCVFSP--------DCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSK-FLL 64 (65)
Q Consensus 1 l~~~~~~v~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~i~ 64 (65)
+.+|.+.|..++|+| +++.+++++.|+.+++|++..+..+..+.. |...+.+++|+|++. .++
T Consensus 132 ~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~~~-~~~~v~~v~~~p~~~~~l~ 203 (393)
T 4gq1_A 132 KSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAGYP-LSSPGISVQFRPSNPNQLI 203 (393)
T ss_dssp TTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEEEEE-CSSCEEEEEEETTEEEEEE
T ss_pred cCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeeeecC-CCCCcEEEEECCCCCceEE
Confidence 467999999999987 678999999999999999988877777777 788999999999875 443
No 41
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.54 E-value=3.7e-13 Score=62.99 Aligned_cols=58 Identities=28% Similarity=0.463 Sum_probs=53.5
Q ss_pred ceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 7 YGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 7 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
.|.++.|+|+++.+++++.++.+++|++.+++.+..+.. |...|.+++|+|+++.+++
T Consensus 125 ~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~-h~~~v~~~~~~p~~~~l~s 182 (393)
T 1erj_A 125 YIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQG-HEQDIYSLDYFPSGDKLVS 182 (393)
T ss_dssp BEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECC-CSSCEEEEEECTTSSEEEE
T ss_pred eEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcc-CCCCEEEEEEcCCCCEEEE
Confidence 488999999999999999999999999999988888888 8999999999999988864
No 42
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.54 E-value=5.5e-14 Score=64.21 Aligned_cols=64 Identities=20% Similarity=0.284 Sum_probs=50.1
Q ss_pred CCccccceEEEEECCCCCEEEEecCCCcEEEEECCCCc--eEEEeeccCCCcEeEEEEcc--CCcEEeC
Q psy7061 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFS--LVRELGTANQRWVWDAAFTL--DSKFLLT 65 (65)
Q Consensus 1 l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~v~~~~~~~--~~~~i~s 65 (65)
+.+|...|.++.|+|+++.+++++.|+.+++|++..+. .+..+.+ |...|.+++|+| +++.++|
T Consensus 9 ~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~g-H~~~V~~v~~~~~~~~~~l~s 76 (316)
T 3bg1_A 9 DTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRG-HEGPVWQVAWAHPMYGNILAS 76 (316)
T ss_dssp -----CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEEC-CSSCEEEEEECCGGGSSCEEE
T ss_pred cccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcC-CCccEEEEEeCCCCCCCEEEE
Confidence 35799999999999999999999999999999998664 3556777 899999999975 3666653
No 43
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.53 E-value=2e-13 Score=63.78 Aligned_cols=62 Identities=26% Similarity=0.316 Sum_probs=54.3
Q ss_pred CccccceEEEEECC-CCCEEEEecCCCcEEEEECCCC-------ceEEEeeccCCCcEeEEEEccCC-cEEe
Q psy7061 2 AAHRAYGLHCVFSP-DCRLLATTSADQTARIWNTEDF-------SLVRELGTANQRWVWDAAFTLDS-KFLL 64 (65)
Q Consensus 2 ~~~~~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~v~~~~~~~~~-~~i~ 64 (65)
.+|.+.|.++.|+| ++..+++++.|+.+++|++..+ ..+..+.. |...|.+++|+|++ ..++
T Consensus 78 ~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~-h~~~v~~~~~~p~~~~~l~ 148 (402)
T 2aq5_A 78 CGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEG-HTKRVGIVAWHPTAQNVLL 148 (402)
T ss_dssp CCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEEC-CSSCEEEEEECSSBTTEEE
T ss_pred ecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecC-CCCeEEEEEECcCCCCEEE
Confidence 46889999999999 8899999999999999999876 55667777 89999999999997 4665
No 44
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.53 E-value=1.1e-13 Score=62.40 Aligned_cols=63 Identities=24% Similarity=0.295 Sum_probs=56.8
Q ss_pred CCccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 1 l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
+.+|.+.|.++.| +++..+++++.++.+++|++.++.....+.. |...+.+++|+|+++.+++
T Consensus 14 l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~ 76 (313)
T 3odt_A 14 LKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYT-GQGFLNSVCYDSEKELLLF 76 (313)
T ss_dssp ECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEE-CSSCEEEEEEETTTTEEEE
T ss_pred hhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeec-CCccEEEEEECCCCCEEEE
Confidence 3579999999999 8899999999999999999998888878887 8999999999999998863
No 45
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.53 E-value=1.4e-13 Score=64.10 Aligned_cols=64 Identities=20% Similarity=0.269 Sum_probs=53.8
Q ss_pred CccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeecc------CCCcEeEEEEccCCcEEeC
Q psy7061 2 AAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTA------NQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 2 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~v~~~~~~~~~~~i~s 65 (65)
.+|.+.|.++.|+|+++.+++++.|+.+++|+++++..+..+..+ +...+.+++|+|+++++++
T Consensus 246 ~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~ 315 (380)
T 3iz6_a 246 HGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFA 315 (380)
T ss_dssp CCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEE
T ss_pred CCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEE
Confidence 468889999999999999999999999999999998887766541 1234889999999998864
No 46
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.53 E-value=7.4e-14 Score=64.22 Aligned_cols=63 Identities=25% Similarity=0.349 Sum_probs=54.5
Q ss_pred CccccceEEEEECCCCCEEEEecCCCcEEEEECC--CCceEEEeeccCCCcEeEEEEccC--CcEEeC
Q psy7061 2 AAHRAYGLHCVFSPDCRLLATTSADQTARIWNTE--DFSLVRELGTANQRWVWDAAFTLD--SKFLLT 65 (65)
Q Consensus 2 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~v~~~~~~~~--~~~i~s 65 (65)
.+|...|.++.|+|+++.+++++.++.+++|++. ....+..+.. |...|.+++|+++ ++++++
T Consensus 8 ~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~~~l~s 74 (379)
T 3jrp_A 8 NAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTG-HEGPVWRVDWAHPKFGTILAS 74 (379)
T ss_dssp EECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECC-CSSCEEEEEECCGGGCSEEEE
T ss_pred cCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecC-CCCcEEEEEeCCCCCCCEEEE
Confidence 5799999999999999999999999999999997 4556666777 8999999999876 777763
No 47
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.53 E-value=1.8e-13 Score=63.92 Aligned_cols=63 Identities=14% Similarity=0.281 Sum_probs=56.2
Q ss_pred CccccceEEEEECCCC-CEEEEecCCCcEEEEECCCCceEEEe--eccCCCcEeEEEEccCCcEEeC
Q psy7061 2 AAHRAYGLHCVFSPDC-RLLATTSADQTARIWNTEDFSLVREL--GTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 2 ~~~~~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~i~s 65 (65)
.+|...|.++.|+|++ ..+++++.++.+++|++.+++.+..+ .. |...+.+++|+|+++.+++
T Consensus 128 ~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~ 193 (402)
T 2aq5_A 128 EGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDV-HPDTIYSVDWSRDGALICT 193 (402)
T ss_dssp ECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTT-CCSCEEEEEECTTSSCEEE
T ss_pred cCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCC-CCCceEEEEECCCCCEEEE
Confidence 3588899999999997 68999999999999999999888888 56 8899999999999988764
No 48
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.52 E-value=4.1e-13 Score=62.20 Aligned_cols=63 Identities=16% Similarity=0.208 Sum_probs=56.0
Q ss_pred CccccceEEEEECC--CCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 2 AAHRAYGLHCVFSP--DCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 2 ~~~~~~v~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
.+|...+.++.++| +++.+++++.|+.+++|+++++..+..+.. |...|.+++|+|++..+++
T Consensus 193 ~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~-h~~~v~~v~~~p~~~~l~s 257 (354)
T 2pbi_B 193 HGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFET-HESDVNSVRYYPSGDAFAS 257 (354)
T ss_dssp ECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECC-CSSCEEEEEECTTSSEEEE
T ss_pred cCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecC-CCCCeEEEEEeCCCCEEEE
Confidence 36788899999987 467999999999999999999998888888 8999999999999988864
No 49
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.52 E-value=4.3e-13 Score=61.48 Aligned_cols=63 Identities=25% Similarity=0.352 Sum_probs=56.1
Q ss_pred CccccceEEEEECC-CCCEEEEecCCCcEEEEECCCCceEEEe---eccCCCcEeEEEEccCCcEEeC
Q psy7061 2 AAHRAYGLHCVFSP-DCRLLATTSADQTARIWNTEDFSLVREL---GTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 2 ~~~~~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~v~~~~~~~~~~~i~s 65 (65)
.+|...|.++.|+| ++..+++++.++.+++|++++++.+..+ .. |...+.+++|+|++..+++
T Consensus 112 ~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~ 178 (366)
T 3k26_A 112 VGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEG-HRDEVLSADYDLLGEKIMS 178 (366)
T ss_dssp ESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTS-CSSCEEEEEECTTSSEEEE
T ss_pred cCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEeccccc-ccCceeEEEECCCCCEEEE
Confidence 35888999999999 8899999999999999999998888777 45 8899999999999988864
No 50
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.52 E-value=5.1e-13 Score=61.99 Aligned_cols=58 Identities=10% Similarity=0.100 Sum_probs=54.1
Q ss_pred ccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCc
Q psy7061 3 AHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSK 61 (65)
Q Consensus 3 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 61 (65)
+|...|.++.|+|+++.+++++.++.+++|++.++..+..+.. |...+.+++|+|++.
T Consensus 137 ~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~-h~~~v~~v~~s~~~~ 194 (357)
T 4g56_B 137 EHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNA-HSSEVNCVAACPGKD 194 (357)
T ss_dssp CCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECC-CSSCEEEEEECTTCS
T ss_pred CCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcC-CCCCEEEEEEccCCC
Confidence 5788999999999999999999999999999999999988888 899999999999875
No 51
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.51 E-value=7.7e-14 Score=64.47 Aligned_cols=63 Identities=13% Similarity=0.071 Sum_probs=50.0
Q ss_pred CccccceEEEEECCCCCEEEEecCCCcEEEEECCCCc---eEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 2 AAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFS---LVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 2 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
.+|...|.++.|+|+++.+++++.++.+++|++..+. ....+.. |...+.+++|+|+++.+++
T Consensus 52 ~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~ 117 (377)
T 3dwl_C 52 SDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLR-LNRAATFVRWSPNEDKFAV 117 (377)
T ss_dssp CCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CCCCEEECCC-CSSCEEEEECCTTSSCCEE
T ss_pred ecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEecc-cCCceEEEEECCCCCEEEE
Confidence 5688899999999999999999999999999998766 5556666 8899999999999887763
No 52
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.51 E-value=2.4e-13 Score=61.68 Aligned_cols=63 Identities=22% Similarity=0.404 Sum_probs=53.2
Q ss_pred CccccceEEEEECCCC----CEEEEecCCCcEEEEECCCC----------------------------------------
Q psy7061 2 AAHRAYGLHCVFSPDC----RLLATTSADQTARIWNTEDF---------------------------------------- 37 (65)
Q Consensus 2 ~~~~~~v~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~---------------------------------------- 37 (65)
.+|...|.++.|+|++ +.+++++.|+.+++|++..+
T Consensus 211 ~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (351)
T 3f3f_A 211 PGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAEL 290 (351)
T ss_dssp CCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC---------------------------------------
T ss_pred CCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeee
Confidence 4688899999999987 78999999999999998754
Q ss_pred ------ceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 38 ------SLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 38 ------~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
..+..+.. |...|.+++|+|+++++++
T Consensus 291 ~~~~~~~~~~~~~~-h~~~v~~~~~s~~~~~l~s 323 (351)
T 3f3f_A 291 QSNLQVELLSEHDD-HNGEVWSVSWNLTGTILSS 323 (351)
T ss_dssp CCSEEEEEEEEECT-TSSCEEEEEECSSSCCEEE
T ss_pred cccccccEEEEEec-ccccEEEEEEcCCCCEEEE
Confidence 44555566 8899999999999988764
No 53
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.50 E-value=4.1e-13 Score=61.78 Aligned_cols=62 Identities=15% Similarity=0.141 Sum_probs=52.9
Q ss_pred cccceEEEEECCCCCEEEEecCCCcEEEEECCCCceE-EEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 4 HRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLV-RELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 4 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
+...+.++.|+|++..+++++.++.+++|+++++... ..+...|...|.+++|+|++.++++
T Consensus 169 ~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s 231 (343)
T 3lrv_A 169 SDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVV 231 (343)
T ss_dssp SSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEE
T ss_pred CCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEE
Confidence 4446889999999999999999999999999988766 4554437899999999999998874
No 54
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.50 E-value=5.6e-13 Score=61.40 Aligned_cols=64 Identities=22% Similarity=0.327 Sum_probs=53.7
Q ss_pred CCccccceEEEEE-----CC-CCCEEEEecCCCcEEEEECCCC-------ceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 1 MAAHRAYGLHCVF-----SP-DCRLLATTSADQTARIWNTEDF-------SLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 1 l~~~~~~v~~~~~-----~~-~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
|++|...|.++.| ++ +++.+++++.|+.+++|++... .....+.+ |...|.+++|+|++.++++
T Consensus 17 l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~-h~~~V~~~~~~~~~~~l~s 93 (343)
T 2xzm_R 17 LEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTG-HNHFVSDLALSQENCFAIS 93 (343)
T ss_dssp EECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECC-CSSCEEEEEECSSTTEEEE
T ss_pred eccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhcc-CCCceEEEEECCCCCEEEE
Confidence 4579999999999 66 7899999999999999998743 34455666 8999999999999988764
No 55
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.48 E-value=9.3e-13 Score=60.60 Aligned_cols=62 Identities=16% Similarity=0.155 Sum_probs=56.4
Q ss_pred CccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 2 AAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 2 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
.+|...+..+.|+|+++.+++++.++.+++|++++++.+..+.. +...+.+++|+|++++++
T Consensus 199 ~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~ 260 (372)
T 1k8k_C 199 SSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLAS-ETLPLLAVTFITESSLVA 260 (372)
T ss_dssp CCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEEC-SSCCEEEEEEEETTEEEE
T ss_pred CCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEcc-CCCCeEEEEEecCCCEEE
Confidence 35777899999999999999999999999999999998888888 888999999999998876
No 56
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.48 E-value=7.6e-13 Score=60.03 Aligned_cols=63 Identities=17% Similarity=0.218 Sum_probs=51.9
Q ss_pred CCccccceEEEEECCC--CCEEEEecCCCcEEEEECCCCc--eEEEeeccCCCcEeEEEEccC--CcEEe
Q psy7061 1 MAAHRAYGLHCVFSPD--CRLLATTSADQTARIWNTEDFS--LVRELGTANQRWVWDAAFTLD--SKFLL 64 (65)
Q Consensus 1 l~~~~~~v~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~v~~~~~~~~--~~~i~ 64 (65)
|.+|.+.|.++.|+++ ++.+++++.|+.+++|++.++. .+..+.. |...|.+++|+|+ +..++
T Consensus 49 l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~-h~~~v~~v~~~p~~~g~~l~ 117 (297)
T 2pm7_B 49 LTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQIAVHAV-HSASVNSVQWAPHEYGPMLL 117 (297)
T ss_dssp ECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCEEECC-CSSCEEEEEECCGGGCSEEE
T ss_pred EccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEEEeec-CCCceeEEEeCcCCCCcEEE
Confidence 3578999999999864 7899999999999999998763 4445566 8899999999997 66665
No 57
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.48 E-value=5.9e-13 Score=62.03 Aligned_cols=61 Identities=20% Similarity=0.410 Sum_probs=55.7
Q ss_pred ccccceEEEEECC-CCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCC-cEEe
Q psy7061 3 AHRAYGLHCVFSP-DCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDS-KFLL 64 (65)
Q Consensus 3 ~~~~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~i~ 64 (65)
+|...+..+.|+| +++.+++++.++.+++|++.+++.+..+.. |...+.+++|+|++ ..++
T Consensus 260 ~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~-~~~~v~~~~~s~~~~~~l~ 322 (416)
T 2pm9_A 260 GHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPA-RGNWCFKTKFAPEAPDLFA 322 (416)
T ss_dssp CCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEEC-SSSCCCCEEECTTCTTEEE
T ss_pred CccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecC-CCCceEEEEECCCCCCEEE
Confidence 6888999999999 889999999999999999999999888888 88999999999998 6665
No 58
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.48 E-value=7.1e-13 Score=60.59 Aligned_cols=64 Identities=22% Similarity=0.419 Sum_probs=51.6
Q ss_pred CCccccceEEEEECCCC----CEEEEecCCCcEEEEECCCCc----eEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 1 MAAHRAYGLHCVFSPDC----RLLATTSADQTARIWNTEDFS----LVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 1 l~~~~~~v~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
+.+|...|.++.|+|++ ..+++++.|+.+++|++.... ....+.. |...|.+++|+|+++++++
T Consensus 208 l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~-~~~~v~~v~~sp~g~~las 279 (316)
T 3bg1_A 208 LEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHK-FNDVVWHVSWSITANILAV 279 (316)
T ss_dssp CBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEE-CSSCEEEEEECTTTCCEEE
T ss_pred cccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhc-CCCcEEEEEEcCCCCEEEE
Confidence 35688899999999976 789999999999999987521 1223445 7889999999999988864
No 59
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.47 E-value=1.4e-13 Score=63.66 Aligned_cols=62 Identities=15% Similarity=0.082 Sum_probs=53.9
Q ss_pred ccccceEEEEECCCCCEEEEecCCCcEEEEECCCCce----EEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 3 AHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSL----VRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 3 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
+|...|.++.|+|+++.+++++.++.+++|++.++.. +..+.. |...+.+++|+|+++++++
T Consensus 203 ~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~ 268 (377)
T 3dwl_C 203 PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALITVKL-SQLPLRSLLWANESAIVAA 268 (377)
T ss_dssp CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEECCCEEC-SSSCEEEEEEEETTEEEEE
T ss_pred cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceeeEeecC-CCCceEEEEEcCCCCEEEE
Confidence 5777899999999999999999999999999998776 666777 8899999999999988863
No 60
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.47 E-value=7.5e-13 Score=60.91 Aligned_cols=62 Identities=16% Similarity=0.116 Sum_probs=55.5
Q ss_pred ccccceEEEEECCCCCEEEEecCCCcEEEEECCCCc--eEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 3 AHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFS--LVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 3 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
.|...|.++.|+|+++.+++++.++.+++|++..++ .+..+.. |...+.+++|+|+++++++
T Consensus 6 ~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~~ 69 (372)
T 1k8k_C 6 FLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKE-HNGQVTGVDWAPDSNRIVT 69 (372)
T ss_dssp SCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEEC-CSSCEEEEEEETTTTEEEE
T ss_pred ccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecC-CCCcccEEEEeCCCCEEEE
Confidence 477889999999999999999999999999998876 7777777 8999999999999998864
No 61
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.47 E-value=1e-12 Score=61.75 Aligned_cols=62 Identities=15% Similarity=0.249 Sum_probs=52.4
Q ss_pred ccccceEEEEECCCC-CEEEEecCCCcEEEEECCCCce----EEEeeccCCC------------cEeEEEEccCCcEEeC
Q psy7061 3 AHRAYGLHCVFSPDC-RLLATTSADQTARIWNTEDFSL----VRELGTANQR------------WVWDAAFTLDSKFLLT 65 (65)
Q Consensus 3 ~~~~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~------------~v~~~~~~~~~~~i~s 65 (65)
+|...|.++.|+|++ +.+++++.++.+++|+++.+.. ...+.. +.. .+.+++|+|+++++++
T Consensus 224 ~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~ 302 (447)
T 3dw8_B 224 ELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEE-PEDPSNRSFFSEIISSISDVKFSHSGRYMMT 302 (447)
T ss_dssp GCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEECC-C-----CCHHHHHTTCEEEEEECTTSSEEEE
T ss_pred ccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccceeeEecc-CCCccccccccccCceEEEEEECCCCCEEEE
Confidence 577889999999998 8999999999999999998775 566666 554 8999999999998874
No 62
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.46 E-value=5.5e-13 Score=66.31 Aligned_cols=63 Identities=13% Similarity=0.130 Sum_probs=57.6
Q ss_pred CccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 2 AAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 2 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
.+|...|.++.|+|+++.+++++.++.+++|++.+++.+..+.. |...+.+++|+|+++.+++
T Consensus 52 ~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~ 114 (814)
T 3mkq_A 52 QVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEA-HPDYIRSIAVHPTKPYVLS 114 (814)
T ss_dssp ECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEEC-CSSCEEEEEECSSSSEEEE
T ss_pred ecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEec-CCCCEEEEEEeCCCCEEEE
Confidence 35788999999999999999999999999999999999888888 8999999999999988763
No 63
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.46 E-value=7.1e-13 Score=62.65 Aligned_cols=62 Identities=10% Similarity=0.012 Sum_probs=49.7
Q ss_pred ccccceEEEEECC-CCCEEEEecCCCcEEEEECCCCceE--EEeeccCCCcEeEEEEcc-CCcEEeC
Q psy7061 3 AHRAYGLHCVFSP-DCRLLATTSADQTARIWNTEDFSLV--RELGTANQRWVWDAAFTL-DSKFLLT 65 (65)
Q Consensus 3 ~~~~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~v~~~~~~~-~~~~i~s 65 (65)
+|...|++++|+| ++..+++|+.|+.|++|++..+... ..+.+ |...|.+++|+| ++.+++|
T Consensus 117 ~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~g-H~~~V~~l~f~p~~~~~l~s 182 (435)
T 4e54_B 117 PFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIG-AGGSITGLKFNPLNTNQFYA 182 (435)
T ss_dssp ECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCS-SSCCCCEEEECSSCTTEEEE
T ss_pred CCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccC-CCCCEEEEEEeCCCCCEEEE
Confidence 3667799999999 5678999999999999999865433 33445 899999999998 5777764
No 64
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.45 E-value=3.2e-12 Score=58.09 Aligned_cols=62 Identities=18% Similarity=0.246 Sum_probs=55.8
Q ss_pred ccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 3 AHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 3 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
+|...+..+.|+|+++.+++++.++.+++|++.+++.+..+.. |...+.+++|+|+++.+++
T Consensus 139 ~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~ 200 (337)
T 1gxr_A 139 SSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQG-HTDGASCIDISNDGTKLWT 200 (337)
T ss_dssp CSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECC-CSSCEEEEEECTTSSEEEE
T ss_pred cCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeec-ccCceEEEEECCCCCEEEE
Confidence 4667899999999999999999999999999999988888887 8899999999999988763
No 65
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.45 E-value=3.2e-12 Score=61.89 Aligned_cols=64 Identities=9% Similarity=0.043 Sum_probs=56.6
Q ss_pred CccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEcc----------CCcEEeC
Q psy7061 2 AAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTL----------DSKFLLT 65 (65)
Q Consensus 2 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~----------~~~~i~s 65 (65)
.+|...+.++.|+|+++.+++++.++.+++|++.+++.+..+...|...+.+++|+| +++++++
T Consensus 485 ~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~ 558 (615)
T 1pgu_A 485 TPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVAT 558 (615)
T ss_dssp SCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC------CCSCCEEEE
T ss_pred CCccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCcceeEeecCCCCceeEEEEcCccccccccccCCCEEEE
Confidence 457889999999999999999999999999999998887776644789999999999 8988864
No 66
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.45 E-value=3.8e-12 Score=58.38 Aligned_cols=61 Identities=16% Similarity=0.145 Sum_probs=55.1
Q ss_pred CccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 2 AAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 2 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
.+|...|.++.|+|+++.+++++.++.+++|++.+++.+..+. +...+.+++|+|+++.++
T Consensus 71 ~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~ 131 (369)
T 3zwl_B 71 DGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATWK--SPVPVKRVEFSPCGNYFL 131 (369)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEE--CSSCEEEEEECTTSSEEE
T ss_pred hhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEee--cCCCeEEEEEccCCCEEE
Confidence 4688899999999999999999999999999999988887776 678899999999998876
No 67
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.45 E-value=9e-13 Score=67.04 Aligned_cols=61 Identities=11% Similarity=-0.038 Sum_probs=52.0
Q ss_pred ccccceEEEEECCCCCEEEEecCCCcEEEEECCCCc--------------------------------------------
Q psy7061 3 AHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFS-------------------------------------------- 38 (65)
Q Consensus 3 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------------------------- 38 (65)
+|...|.+++|+|+++.+++++.|+.|++|++.+++
T Consensus 486 ~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 565 (902)
T 2oaj_A 486 AKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGF 565 (902)
T ss_dssp SSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEE
T ss_pred CCCCceeEEEecCCCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCcc
Confidence 577889999999999999999999999999987542
Q ss_pred -eEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 39 -LVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 39 -~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
.+..+.. |...|.+++|+|+| ++++
T Consensus 566 ~~~~~l~~-h~~~V~svafSpdG-~lAs 591 (902)
T 2oaj_A 566 MPSTAVHA-NKGKTSAINNSNIG-FVGI 591 (902)
T ss_dssp EEEEEECC-CSCSEEEEEECBTS-EEEE
T ss_pred ceeEEEEc-CCCcEEEEEecCCc-EEEE
Confidence 2455666 89999999999999 7763
No 68
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.44 E-value=2e-12 Score=62.56 Aligned_cols=60 Identities=18% Similarity=0.226 Sum_probs=54.2
Q ss_pred cccceEEEEECC----------CCCEEEEecCCCcEEEEECCCC-ceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 4 HRAYGLHCVFSP----------DCRLLATTSADQTARIWNTEDF-SLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 4 ~~~~v~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
|...|..+.|+| +++.+++++.++.+++|++.++ ..+..+.. |...|.+++|+|+++ +++
T Consensus 530 h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~-h~~~v~~l~~s~~~~-l~s 600 (615)
T 1pgu_A 530 RTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNA-HKDGVNNLLWETPST-LVS 600 (615)
T ss_dssp CSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEETTS-STTCEEEEEEEETTE-EEE
T ss_pred CCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCCceechhhhc-CccceEEEEEcCCCC-eEE
Confidence 888999999999 9999999999999999999987 67777777 899999999999998 653
No 69
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.44 E-value=3.1e-12 Score=58.89 Aligned_cols=63 Identities=11% Similarity=-0.109 Sum_probs=52.6
Q ss_pred ccccceEEEEECC--CCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 3 AHRAYGLHCVFSP--DCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 3 ~~~~~v~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
+|...|.++.|+| +++.+++++.++.+++|++.+++.......++...+.+++|+|++.++++
T Consensus 123 ~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~las 187 (343)
T 3lrv_A 123 DSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLAL 187 (343)
T ss_dssp CCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEE
T ss_pred CCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEE
Confidence 3557799999999 99999999999999999999888866654435667999999999998874
No 70
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.44 E-value=4.1e-12 Score=58.99 Aligned_cols=56 Identities=18% Similarity=0.321 Sum_probs=52.2
Q ss_pred cccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEee------ccC---------------CCcEeEEEEccCC
Q psy7061 4 HRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELG------TAN---------------QRWVWDAAFTLDS 60 (65)
Q Consensus 4 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~---------------~~~v~~~~~~~~~ 60 (65)
|...+..+.|+|+++.+++++.++.+++|++.+++.+..+. . | ...|.+++|+|++
T Consensus 290 ~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~v~~~~~~~~g 366 (397)
T 1sq9_A 290 HSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIE-IEEDILAVDEHGDSLAEPGVFDVKFLKKG 366 (397)
T ss_dssp BSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCS-SGGGCCCBCTTSCBCSSCCEEEEEEECTT
T ss_pred cCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEecccCccc-chhhhhccccccccccCCceeEEEecccc
Confidence 78899999999999999999999999999999998888888 6 6 8999999999998
No 71
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.44 E-value=2.8e-12 Score=59.73 Aligned_cols=58 Identities=21% Similarity=0.216 Sum_probs=48.2
Q ss_pred cceEEEEECCCCCEEE--EecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 6 AYGLHCVFSPDCRLLA--TTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 6 ~~v~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
..+..++|+|+|+.++ +++.++.+++|++.++..+..+. |...|.+++|+|+++++++
T Consensus 134 ~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~--~~~~V~~v~fspdg~~l~s 193 (365)
T 4h5i_A 134 DYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIE--TRGEVKDLHFSTDGKVVAY 193 (365)
T ss_dssp CCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEE--CSSCCCEEEECTTSSEEEE
T ss_pred cCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeC--CCCceEEEEEccCCceEEe
Confidence 3467899999998765 45578999999999998887775 5678999999999998864
No 72
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.43 E-value=3.8e-12 Score=57.58 Aligned_cols=61 Identities=18% Similarity=0.234 Sum_probs=52.0
Q ss_pred cccceEEEEECCCCCEEEEe--cCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 4 HRAYGLHCVFSPDCRLLATT--SADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 4 ~~~~v~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
+...+..+.|.+++..++++ ..++.+++|++++++.+..+.+ |...|.+++|+|++++|+|
T Consensus 239 ~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~g-H~~~V~~l~~spdg~~l~S 301 (318)
T 4ggc_A 239 AHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKG-HTSRVLSLTMSPDGATVAS 301 (318)
T ss_dssp CSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECC-CSSCEEEEEECTTSSCEEE
T ss_pred ceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcC-CCCCEEEEEEcCCCCEEEE
Confidence 34567888999988766544 4789999999999999999998 9999999999999998875
No 73
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.43 E-value=2.2e-12 Score=60.40 Aligned_cols=61 Identities=16% Similarity=0.097 Sum_probs=54.5
Q ss_pred CccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEE
Q psy7061 2 AAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFL 63 (65)
Q Consensus 2 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i 63 (65)
.+|.+.|..+.|+|+++.+++++.++.+++|++..+.....+.. |...+.+++|+|++..+
T Consensus 214 ~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~-~~~~v~~~~~~p~~~~l 274 (401)
T 4aez_A 214 QGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTN-HNAAVKAVAWCPWQSNL 274 (401)
T ss_dssp ECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECC-CSSCCCEEEECTTSTTE
T ss_pred cCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecC-CcceEEEEEECCCCCCE
Confidence 35788999999999999999999999999999999888888887 88999999999976544
No 74
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.43 E-value=1.8e-12 Score=60.20 Aligned_cols=63 Identities=10% Similarity=0.089 Sum_probs=53.2
Q ss_pred CccccceEEEEECCCC-CEEEEecCCCcEEEEECCCCceEEEeec-cCCCcEeEEEEcc-CCcEEe
Q psy7061 2 AAHRAYGLHCVFSPDC-RLLATTSADQTARIWNTEDFSLVRELGT-ANQRWVWDAAFTL-DSKFLL 64 (65)
Q Consensus 2 ~~~~~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~-~~~~i~ 64 (65)
.+|...|.++.|+|++ +.+++++.++.+++|++..+.....+.. .|...|.+++|+| ++..++
T Consensus 70 ~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~ 135 (383)
T 3ei3_B 70 SPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLF 135 (383)
T ss_dssp CCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEE
T ss_pred cCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEE
Confidence 4688899999999998 8999999999999999997776655542 3889999999999 666665
No 75
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.43 E-value=6.1e-12 Score=58.57 Aligned_cols=60 Identities=15% Similarity=0.224 Sum_probs=52.7
Q ss_pred cccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 4 HRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 4 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
|...|.++.|+|+++.+++++.++.+++|+ ..+..+..+.. |...+.+++|+|+++.+++
T Consensus 107 ~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~-~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~ 166 (425)
T 1r5m_A 107 TTNQVTCLAWSHDGNSIVTGVENGELRLWN-KTGALLNVLNF-HRAPIVSVKWNKDGTHIIS 166 (425)
T ss_dssp -CBCEEEEEECTTSSEEEEEETTSCEEEEE-TTSCEEEEECC-CCSCEEEEEECTTSSEEEE
T ss_pred CCCceEEEEEcCCCCEEEEEeCCCeEEEEe-CCCCeeeeccC-CCccEEEEEECCCCCEEEE
Confidence 677899999999999999999999999999 56777777777 8999999999999988763
No 76
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.43 E-value=6.7e-13 Score=66.30 Aligned_cols=64 Identities=25% Similarity=0.340 Sum_probs=53.6
Q ss_pred CCccccceEEEEECCCCCEEEEecCCCcEEEEECC--CCceEEEeeccCCCcEeEEEEccC--CcEEeC
Q psy7061 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTE--DFSLVRELGTANQRWVWDAAFTLD--SKFLLT 65 (65)
Q Consensus 1 l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~v~~~~~~~~--~~~i~s 65 (65)
+.+|.+.|.++.|+|+++.+++++.++.+++|++. .......+.. |...|.+++|+|+ ++.+++
T Consensus 5 l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~-h~~~V~~l~~s~~~~~~~l~s 72 (753)
T 3jro_A 5 ANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTG-HEGPVWRVDWAHPKFGTILAS 72 (753)
T ss_dssp ---CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECC-CSSCEEEEEECCTTSCSEEEE
T ss_pred cccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccC-CcCceEEEEecCCCCCCEEEE
Confidence 46899999999999999999999999999999987 4456666777 8999999999987 777764
No 77
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.42 E-value=7.7e-12 Score=57.02 Aligned_cols=61 Identities=21% Similarity=0.292 Sum_probs=53.7
Q ss_pred CccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 2 AAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 2 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
.+|.+.|.++.|+|+++.+++++.|+.+++|++.....+..+.. ...+..++|+|++..++
T Consensus 212 ~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~ 272 (340)
T 4aow_A 212 IGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG--GDIINALCFSPNRYWLC 272 (340)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEEC--SSCEEEEEECSSSSEEE
T ss_pred cCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecC--CceEEeeecCCCCceee
Confidence 46888999999999999999999999999999999888877774 56899999999987664
No 78
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.42 E-value=8.6e-12 Score=61.75 Aligned_cols=62 Identities=24% Similarity=0.412 Sum_probs=55.8
Q ss_pred ccccceEEEEECCCC--CEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 3 AHRAYGLHCVFSPDC--RLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 3 ~~~~~v~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
+|...|.++.|+|++ ..+++++.++.+++|+++.......+.. |...|.+++|+|+++++++
T Consensus 515 ~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~-h~~~v~~v~~spdg~~l~s 578 (694)
T 3dm0_A 515 GHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAG-HTGYVSTVAVSPDGSLCAS 578 (694)
T ss_dssp SCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECC-CSSCEEEEEECTTSSEEEE
T ss_pred CCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcC-CCCCEEEEEEeCCCCEEEE
Confidence 577889999999976 5799999999999999999888888888 8999999999999998874
No 79
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.41 E-value=3.3e-12 Score=59.82 Aligned_cols=62 Identities=15% Similarity=0.211 Sum_probs=54.8
Q ss_pred ccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEcc------CCcEEeC
Q psy7061 3 AHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTL------DSKFLLT 65 (65)
Q Consensus 3 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~------~~~~i~s 65 (65)
+|...|..+.|++++.++++++.|+.+++|+..++..+..+.+ |...|.+++|++ ++..++|
T Consensus 308 ~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~-h~~~v~~v~~~~~~~~~p~~~~l~s 375 (393)
T 1erj_A 308 GHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQG-HRNSVISVAVANGSSLGPEYNVFAT 375 (393)
T ss_dssp CCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEEC-CSSCEEEEEECSSCTTCTTCEEEEE
T ss_pred cccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECC-CCCCEEEEEecCCcCcCCCCCEEEE
Confidence 5778899999999999999999999999999999999888888 899999999886 5666653
No 80
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.41 E-value=3.9e-12 Score=58.57 Aligned_cols=62 Identities=18% Similarity=0.206 Sum_probs=53.6
Q ss_pred CccccceEEEEECCC--CCEEEEecCCCcEEEEECCCCc--eEEEeeccCCCcEeEEEEccC--CcEEe
Q psy7061 2 AAHRAYGLHCVFSPD--CRLLATTSADQTARIWNTEDFS--LVRELGTANQRWVWDAAFTLD--SKFLL 64 (65)
Q Consensus 2 ~~~~~~v~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~v~~~~~~~~--~~~i~ 64 (65)
.+|...|.++.|+++ ++.+++++.++.+++|++..+. .+..+.. |...+.+++|+|+ +..++
T Consensus 52 ~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~l~ 119 (379)
T 3jrp_A 52 TGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAV-HSASVNSVQWAPHEYGPLLL 119 (379)
T ss_dssp CCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEECC-CSSCEEEEEECCGGGCSEEE
T ss_pred cCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeeeecC-CCcceEEEEeCCCCCCCEEE
Confidence 468889999999987 8999999999999999999876 5556666 8899999999999 77765
No 81
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.41 E-value=2.2e-12 Score=58.89 Aligned_cols=63 Identities=14% Similarity=0.066 Sum_probs=53.3
Q ss_pred CccccceEEEEECCCCCEEEEecCCCcEEEEECCCCc---eEEEeeccCCCcEeEEEEccCCc-EEeC
Q psy7061 2 AAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFS---LVRELGTANQRWVWDAAFTLDSK-FLLT 65 (65)
Q Consensus 2 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~v~~~~~~~~~~-~i~s 65 (65)
.+|.+.|.++.|+|+++.+++++.++.+++|++..+. ....... |...+.+++|+|+++ .+++
T Consensus 8 ~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~ 74 (342)
T 1yfq_A 8 QAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLR-YKHPLLCCNFIDNTDLQIYV 74 (342)
T ss_dssp SCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEE-CSSCEEEEEEEESSSEEEEE
T ss_pred cCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeee-cCCceEEEEECCCCCcEEEE
Confidence 4688999999999999999999999999999998766 2334445 889999999999998 7753
No 82
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.41 E-value=3.7e-12 Score=59.09 Aligned_cols=64 Identities=13% Similarity=0.072 Sum_probs=51.7
Q ss_pred CCccccceEEEEECC-CCCEEEEecCCCcEEEEECCCCceEEEee------------ccCCCcEeEEEEcc-CCcEEe
Q psy7061 1 MAAHRAYGLHCVFSP-DCRLLATTSADQTARIWNTEDFSLVRELG------------TANQRWVWDAAFTL-DSKFLL 64 (65)
Q Consensus 1 l~~~~~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~v~~~~~~~-~~~~i~ 64 (65)
+.+|.+.|.++.|+| +++.+++++.++.+++|++.++....... ..|...|.+++|+| ++..++
T Consensus 39 ~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~ 116 (408)
T 4a11_B 39 ERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFT 116 (408)
T ss_dssp CCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEE
T ss_pred eeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEE
Confidence 356899999999999 99999999999999999998765433332 12789999999999 665554
No 83
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.41 E-value=6.7e-12 Score=56.62 Aligned_cols=61 Identities=18% Similarity=0.370 Sum_probs=53.9
Q ss_pred CccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 2 AAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 2 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
.+|...+..+.|+|++ .+++++.++.+++|++.+++....+.. +...+.+++|+|++++++
T Consensus 222 ~~~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~ 282 (313)
T 3odt_A 222 EGHESFVYCIKLLPNG-DIVSCGEDRTVRIWSKENGSLKQVITL-PAISIWSVDCMSNGDIIV 282 (313)
T ss_dssp ECCSSCEEEEEECTTS-CEEEEETTSEEEEECTTTCCEEEEEEC-SSSCEEEEEECTTSCEEE
T ss_pred hcCCceEEEEEEecCC-CEEEEecCCEEEEEECCCCceeEEEec-cCceEEEEEEccCCCEEE
Confidence 3577889999999988 588899999999999999998888888 888999999999998654
No 84
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.40 E-value=7.2e-12 Score=59.02 Aligned_cols=59 Identities=19% Similarity=0.258 Sum_probs=51.5
Q ss_pred cceEEEEECCCCCEEEEec--CCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 6 AYGLHCVFSPDCRLLATTS--ADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 6 ~~v~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
..+..+.|++++..+++++ .++.+++|++.++..+..+.+ |...|.+++|+|++++|+|
T Consensus 321 ~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~g-H~~~V~~l~~spdg~~l~S 381 (420)
T 4gga_A 321 SQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKG-HTSRVLSLTMSPDGATVAS 381 (420)
T ss_dssp SCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECC-CSSCEEEEEECTTSSCEEE
T ss_pred cceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcC-CCCCEEEEEEcCCCCEEEE
Confidence 4678888999888776544 689999999999999999998 9999999999999998875
No 85
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.40 E-value=1.3e-11 Score=56.10 Aligned_cols=62 Identities=18% Similarity=0.240 Sum_probs=53.8
Q ss_pred CccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 2 AAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 2 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
..|...+..+.|+|+++.+++++.++.+++|++.++....... +...+.+++|+|+++++++
T Consensus 262 ~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~~ 323 (337)
T 1gxr_A 262 HLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSK--ESSSVLSCDISVDDKYIVT 323 (337)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE--CSSCEEEEEECTTSCEEEE
T ss_pred cCCccceeEEEECCCCCEEEEecCCCcEEEEECCCCeEEEEec--CCCcEEEEEECCCCCEEEE
Confidence 3577889999999999999999999999999999888775443 6889999999999988763
No 86
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.40 E-value=4.9e-12 Score=58.74 Aligned_cols=62 Identities=37% Similarity=0.578 Sum_probs=53.0
Q ss_pred CccccceEEEEECCCCC-EEEEecCCCcEEEEECCC----CceEEEeeccCCCcEeEEEEcc-CCcEEeC
Q psy7061 2 AAHRAYGLHCVFSPDCR-LLATTSADQTARIWNTED----FSLVRELGTANQRWVWDAAFTL-DSKFLLT 65 (65)
Q Consensus 2 ~~~~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~v~~~~~~~-~~~~i~s 65 (65)
.+|...|.++.|+|+++ .+++++.++.+++|+++. ...+..+ . |...+.+++|+| +++++++
T Consensus 201 ~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~-~~~~v~~~~~s~~~~~~l~~ 268 (383)
T 3ei3_B 201 KLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-P-HEKPVNAAYFNPTDSTKLLT 268 (383)
T ss_dssp ECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-E-CSSCEEEEEECTTTSCEEEE
T ss_pred ccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-c-CCCceEEEEEcCCCCCEEEE
Confidence 35788999999999988 899999999999999986 4555555 4 889999999999 9988864
No 87
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.40 E-value=5.2e-12 Score=58.65 Aligned_cols=62 Identities=11% Similarity=0.069 Sum_probs=54.1
Q ss_pred CCccccceEEEEECCCCCEEEEecCCCcEEEEECCCCc------eEEEeeccCCCcEeEEEEccC----C---cEEeC
Q psy7061 1 MAAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFS------LVRELGTANQRWVWDAAFTLD----S---KFLLT 65 (65)
Q Consensus 1 l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~v~~~~~~~~----~---~~i~s 65 (65)
+.+|...|.+++|+| +.+++++.++.+++|++.... ....+.. |...|.+++|+|+ + +++++
T Consensus 12 ~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~~g~~~~~l~s 86 (397)
T 1sq9_A 12 GKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFV-HKSGLHHVDVLQAIERDAFELCLVAT 86 (397)
T ss_dssp SSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEEC-CTTCEEEEEEEEEEETTTEEEEEEEE
T ss_pred hhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcceEEec-CCCcEEEEEEecccccCCccccEEEE
Confidence 467999999999988 789999999999999999876 6667777 8999999999999 8 77753
No 88
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.38 E-value=7.6e-12 Score=57.38 Aligned_cols=61 Identities=20% Similarity=0.261 Sum_probs=54.0
Q ss_pred cccceEEEEECCC----CCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEcc-CCcEEeC
Q psy7061 4 HRAYGLHCVFSPD----CRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTL-DSKFLLT 65 (65)
Q Consensus 4 ~~~~v~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~i~s 65 (65)
|...+.++.|+|+ +..+++++.++.+++|++.+++.+..+.. |...+.+++|+| ++..+++
T Consensus 68 ~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~l~s 133 (366)
T 3k26_A 68 ADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVG-HGNAINELKFHPRDPNLLLS 133 (366)
T ss_dssp TTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEES-CCSCEEEEEECSSCTTEEEE
T ss_pred CCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecC-CCCcEEEEEECCCCCCEEEE
Confidence 5567999999998 56899999999999999999998888888 899999999999 8887763
No 89
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.38 E-value=1.4e-12 Score=61.65 Aligned_cols=64 Identities=31% Similarity=0.442 Sum_probs=52.1
Q ss_pred CCccccceEEEEECCCCC-EEEEecCCCcEEEEECCCCceEEEe---eccCCCcEeEEEEccCCcEEeC
Q psy7061 1 MAAHRAYGLHCVFSPDCR-LLATTSADQTARIWNTEDFSLVREL---GTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 1 l~~~~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~v~~~~~~~~~~~i~s 65 (65)
+.+|...|.++.|+|++. .+++++.|+.+++|+++.......+ .. |...|.+++|+|++.++++
T Consensus 246 ~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~-h~~~v~~~~~spdg~~l~s 313 (435)
T 4e54_B 246 LRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLP-HRHPVNAACFSPDGARLLT 313 (435)
T ss_dssp SBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCB-CSSCEEECCBCTTSSEEEE
T ss_pred EecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeee-ccccccceeECCCCCeeEE
Confidence 356888999999999875 6788999999999999865543332 34 7899999999999998874
No 90
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.38 E-value=9.4e-12 Score=59.06 Aligned_cols=63 Identities=10% Similarity=0.112 Sum_probs=52.5
Q ss_pred ccccceEEEEECCCCCEE-EEecCCCcEEEEECC--CCceEEEeec-cCCCcEeEEEEccCCcEEeC
Q psy7061 3 AHRAYGLHCVFSPDCRLL-ATTSADQTARIWNTE--DFSLVRELGT-ANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 3 ~~~~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~v~~~~~~~~~~~i~s 65 (65)
+|.+.|.++.|+|+++.+ ++++.++.+++|++. .+..+..+.. .+...+.+++|+|+++++++
T Consensus 100 ~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~ 166 (450)
T 2vdu_B 100 PIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVII 166 (450)
T ss_dssp CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEE
T ss_pred ccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEE
Confidence 355579999999999985 888899999999998 7777777653 26788999999999998863
No 91
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.37 E-value=2.2e-11 Score=57.40 Aligned_cols=56 Identities=11% Similarity=0.236 Sum_probs=50.1
Q ss_pred CccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEcc
Q psy7061 2 AAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTL 58 (65)
Q Consensus 2 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 58 (65)
.+|...|.+++|+|+++.+++++.|+.+++|++.+++.+..+.. |...+.++++++
T Consensus 144 ~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~-h~~~v~~~s~~~ 199 (420)
T 4gga_A 144 EQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTS-HSARVGSLSWNS 199 (420)
T ss_dssp CSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECC-CSSCEEEEEEET
T ss_pred cCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeC-CCCceEEEeeCC
Confidence 35777899999999999999999999999999999999988888 888898887754
No 92
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.37 E-value=1.2e-11 Score=58.12 Aligned_cols=60 Identities=13% Similarity=0.112 Sum_probs=49.7
Q ss_pred cccceEEEEECCCCCEEEEecCCCcEEEEECCCCc-----------eEEEeeccCC------------CcEeEEEEccCC
Q psy7061 4 HRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFS-----------LVRELGTANQ------------RWVWDAAFTLDS 60 (65)
Q Consensus 4 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~------------~~v~~~~~~~~~ 60 (65)
+.+.|.+++|+|+++.+++++.++.+++|++..+. ....+.. |. ..|.+++|+|++
T Consensus 27 ~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~-h~~~~~~~~~~~~~~~V~~l~~~~~~ 105 (447)
T 3dw8_B 27 EADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQS-HEPEFDYLKSLEIEEKINKIRWLPQK 105 (447)
T ss_dssp GGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEEC-CCCEEEGGGTEEECCCCCEEEECCCC
T ss_pred ccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEeccccc-ccccccccccccccCceEEEEEcCCC
Confidence 46789999999999999999999999999998765 4566666 76 789999999997
Q ss_pred --cEEe
Q psy7061 61 --KFLL 64 (65)
Q Consensus 61 --~~i~ 64 (65)
..++
T Consensus 106 ~~~~l~ 111 (447)
T 3dw8_B 106 NAAQFL 111 (447)
T ss_dssp SSSEEE
T ss_pred CcceEE
Confidence 5554
No 93
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.37 E-value=3.7e-12 Score=59.95 Aligned_cols=62 Identities=15% Similarity=0.116 Sum_probs=51.3
Q ss_pred CccccceEEEEECC-CCCEEEEecCCCcEEEEECCC---Cce---EEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 2 AAHRAYGLHCVFSP-DCRLLATTSADQTARIWNTED---FSL---VRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 2 ~~~~~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~---~~~---~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
++|.+.|.++.|+| +++.+++++.|+.+++|++.. +.. ...+ . |...|.+++|+|++..+++
T Consensus 60 ~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~-~-h~~~v~~~~~~~~~~~l~s 128 (437)
T 3gre_A 60 ENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTY-D-CSSTVTQITMIPNFDAFAV 128 (437)
T ss_dssp TTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEE-E-CSSCEEEEEECTTSSEEEE
T ss_pred cCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeec-c-CCCCEEEEEEeCCCCEEEE
Confidence 56889999999999 999999999999999999875 321 2222 3 7899999999999988764
No 94
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.37 E-value=6e-12 Score=59.69 Aligned_cols=63 Identities=14% Similarity=0.161 Sum_probs=54.3
Q ss_pred CccccceEEEEECCC---CCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 2 AAHRAYGLHCVFSPD---CRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 2 ~~~~~~v~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
.+|...|.++.|+|+ ++.+++++.++.+++|++..+..+..+...|...|.+++|+ +++++++
T Consensus 192 ~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s 257 (450)
T 2vdu_B 192 LGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDYLLLS 257 (450)
T ss_dssp EECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC-STTEEEE
T ss_pred ecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEEC-CCCEEEE
Confidence 357788999999999 88999999999999999998887777442288999999999 9988864
No 95
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.36 E-value=2.1e-11 Score=56.79 Aligned_cols=62 Identities=13% Similarity=0.157 Sum_probs=55.5
Q ss_pred CccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 2 AAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 2 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
.+|...+..+.|+|++ .+++++.++.+++|++.++..+..+.. +...+.+++|+|+++++++
T Consensus 286 ~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~-~~~~i~~~~~s~~~~~l~~ 347 (425)
T 1r5m_A 286 YGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIV-DGVPIFAGRISQDGQKYAV 347 (425)
T ss_dssp CCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEEC-TTCCEEEEEECTTSSEEEE
T ss_pred cCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEeccc-CCccEEEEEEcCCCCEEEE
Confidence 3577889999999988 899999999999999999988888887 8899999999999998863
No 96
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.36 E-value=2.2e-11 Score=55.64 Aligned_cols=59 Identities=19% Similarity=0.188 Sum_probs=52.7
Q ss_pred cccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccC-CCcEeEEEEccCCcEEeC
Q psy7061 4 HRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTAN-QRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 4 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~i~s 65 (65)
|...+..+.|+|+++.+++++.++.+++|++.+++.+..+.. | ...|.+++ |+++++++
T Consensus 250 ~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~-~h~~~v~~~~--~~~~~l~s 309 (342)
T 1yfq_A 250 LAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAK-FNEDSVVKIA--CSDNILCL 309 (342)
T ss_dssp SCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCC-CSSSEEEEEE--ECSSEEEE
T ss_pred cceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhhc-ccCCCceEec--CCCCeEEE
Confidence 455899999999999999999999999999999998888887 6 89999998 99988864
No 97
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.35 E-value=2.6e-11 Score=62.76 Aligned_cols=58 Identities=34% Similarity=0.446 Sum_probs=53.6
Q ss_pred CccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCC
Q psy7061 2 AAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDS 60 (65)
Q Consensus 2 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 60 (65)
.+|...|.++.|+|+++.+++++.++.+++|++.+++.+..+.. |...+.+++|+|++
T Consensus 654 ~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~-~~~~v~~~~~~~~~ 711 (1249)
T 3sfz_A 654 KAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDE-HSEQVNCCHFTNKS 711 (1249)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEEC-CSSCEEEEEECSSS
T ss_pred ccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEEEEcC-CCCcEEEEEEecCC
Confidence 46888999999999999999999999999999999999988888 89999999999953
No 98
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.35 E-value=1.7e-11 Score=60.41 Aligned_cols=55 Identities=11% Similarity=0.167 Sum_probs=46.9
Q ss_pred ceEEEEECCCCCEEEEecCCCcEEEEECCCCc-------eEEEe----eccCCCcEeEEEEccCCcEE
Q psy7061 7 YGLHCVFSPDCRLLATTSADQTARIWNTEDFS-------LVREL----GTANQRWVWDAAFTLDSKFL 63 (65)
Q Consensus 7 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~----~~~~~~~v~~~~~~~~~~~i 63 (65)
.+.+++|+|+|+.+++++.|+.+++|++..+. .+..+ .+ |...|.+++|+|++ .+
T Consensus 131 sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~g-h~~~V~sVawSPdg-La 196 (588)
T 2j04_A 131 TYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAG-SKDWVTHIVWYEDV-LV 196 (588)
T ss_dssp CEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTT-CCCCEEEEEEETTE-EE
T ss_pred cEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeeccccc-ccccEEEEEEcCCc-EE
Confidence 58899999999999999999999999999774 24555 34 67899999999998 44
No 99
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.34 E-value=6.2e-11 Score=55.05 Aligned_cols=63 Identities=22% Similarity=0.235 Sum_probs=51.9
Q ss_pred CccccceEEEEECCCCCEEEEecCCCcEEEEECCCCc-------------------------------------------
Q psy7061 2 AAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFS------------------------------------------- 38 (65)
Q Consensus 2 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------------------- 38 (65)
.+|...+..+.|+|+++.+++++.++.+++|++.++.
T Consensus 242 ~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~ 321 (408)
T 4a11_B 242 TAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTV 321 (408)
T ss_dssp CSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEET
T ss_pred ccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEEC
Confidence 3577889999999999999999999999999987543
Q ss_pred ----eEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 39 ----LVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 39 ----~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
.+..+.. |...|.+++|+|+++++++
T Consensus 322 ~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~s 351 (408)
T 4a11_B 322 YSGEQITMLKG-HYKTVDCCVFQSNFQELYS 351 (408)
T ss_dssp TTCCEEEEECC-CSSCEEEEEEETTTTEEEE
T ss_pred cCCcceeeecc-CCCeEEEEEEcCCCCEEEE
Confidence 2334445 7889999999999998874
No 100
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.34 E-value=1.4e-11 Score=57.44 Aligned_cols=62 Identities=10% Similarity=0.148 Sum_probs=52.8
Q ss_pred ccccceEEEEECCCCCEEEEecCCCcEEEEECCC----CceEEEeeccCCCcEeEEEEccC-CcEEeC
Q psy7061 3 AHRAYGLHCVFSPDCRLLATTSADQTARIWNTED----FSLVRELGTANQRWVWDAAFTLD-SKFLLT 65 (65)
Q Consensus 3 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~v~~~~~~~~-~~~i~s 65 (65)
.|...|.++.|+|++..+++++.++.+++|++.. ...+..+.. |...|.+++|+|+ +.++++
T Consensus 65 ~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~~l~s 131 (416)
T 2pm9_A 65 QVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSN-HSSSVKTVKFNAKQDNVLAS 131 (416)
T ss_dssp CCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCC-SSSCCCEEEECSSSTTBEEE
T ss_pred ecCCceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccC-CccceEEEEEcCCCCCEEEE
Confidence 3677899999999999999999999999999986 346667777 8999999999998 776653
No 101
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.34 E-value=1.9e-11 Score=61.24 Aligned_cols=63 Identities=17% Similarity=0.202 Sum_probs=54.3
Q ss_pred CccccceEEEEECCC--CCEEEEecCCCcEEEEECCCCc--eEEEeeccCCCcEeEEEEccC--CcEEeC
Q psy7061 2 AAHRAYGLHCVFSPD--CRLLATTSADQTARIWNTEDFS--LVRELGTANQRWVWDAAFTLD--SKFLLT 65 (65)
Q Consensus 2 ~~~~~~v~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~v~~~~~~~~--~~~i~s 65 (65)
.+|.+.|.++.|+++ ++.+++++.|+.+++|++.++. ....+.. |...+.+++|+|+ +..+++
T Consensus 50 ~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~-h~~~V~~v~~sp~~~~~~l~s 118 (753)
T 3jro_A 50 TGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAV-HSASVNSVQWAPHEYGPLLLV 118 (753)
T ss_dssp CCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEECC-CSSCEEEEEECCGGGCSEEEE
T ss_pred cCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcccccccccC-CCCCeEEEEECCCCCCCEEEE
Confidence 468899999999987 8999999999999999998876 5556666 8899999999998 777753
No 102
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.34 E-value=3.9e-11 Score=56.88 Aligned_cols=61 Identities=15% Similarity=0.236 Sum_probs=53.6
Q ss_pred CccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEc--cCCcEEe
Q psy7061 2 AAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFT--LDSKFLL 64 (65)
Q Consensus 2 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~i~ 64 (65)
.+|.+.|.++.|++++ .+++++.++.+++|++.++..+..+.. |...+.+++|+ +++.+++
T Consensus 159 ~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~-h~~~v~~l~~~~~~~~~~l~ 221 (464)
T 3v7d_B 159 SGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCTHVFEG-HNSTVRCLDIVEYKNIKYIV 221 (464)
T ss_dssp CCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTTTEEEEEECC-CSSCEEEEEEEESSSCEEEE
T ss_pred eCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCCcEEEEECC-CCCccEEEEEecCCCCCEEE
Confidence 4688999999999877 899999999999999999998888888 89999999998 4666665
No 103
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.34 E-value=5.1e-12 Score=57.86 Aligned_cols=61 Identities=20% Similarity=0.258 Sum_probs=51.8
Q ss_pred ccccceEEEEECCCCC-EEEEecCCCcEEEEECCCC-------------------ceEEEeeccCCCcEeEEEEccCCcE
Q psy7061 3 AHRAYGLHCVFSPDCR-LLATTSADQTARIWNTEDF-------------------SLVRELGTANQRWVWDAAFTLDSKF 62 (65)
Q Consensus 3 ~~~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~v~~~~~~~~~~~ 62 (65)
+|...+..+.|+|+++ .+++++.++.+++|+++.. ..+..+.. |...|.+++|+|++++
T Consensus 257 ~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~ 335 (357)
T 3i2n_A 257 AHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTL-STQPISSLDWSPDKRG 335 (357)
T ss_dssp CCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEEC-CSSCEEEEEECSSSTT
T ss_pred CCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeecccc-CCCCeeEEEEcCCCCe
Confidence 6888999999999987 7999999999999998743 24555666 8899999999999988
Q ss_pred Ee
Q psy7061 63 LL 64 (65)
Q Consensus 63 i~ 64 (65)
++
T Consensus 336 l~ 337 (357)
T 3i2n_A 336 LC 337 (357)
T ss_dssp EE
T ss_pred EE
Confidence 76
No 104
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.33 E-value=1.8e-11 Score=60.35 Aligned_cols=60 Identities=13% Similarity=0.161 Sum_probs=48.1
Q ss_pred ccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccC----CCcEeEEEEccCCcEEeC
Q psy7061 3 AHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTAN----QRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 3 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~i~s 65 (65)
.|...|..+.|+|+|..+++++.++.+++|+... .+..+. ++ ...+.+++|||+|+++++
T Consensus 83 ~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAs 146 (588)
T 2j04_A 83 QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVV 146 (588)
T ss_dssp SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEE
T ss_pred CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEE
Confidence 3567799999999999999999999999999543 444443 22 236999999999999874
No 105
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.32 E-value=5.6e-12 Score=61.34 Aligned_cols=58 Identities=10% Similarity=0.050 Sum_probs=51.8
Q ss_pred ceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 7 YGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 7 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
.+..+.|+|+++.+++++.++.+++|+++.+..+..+.+ |...|.+++|+|+++.+++
T Consensus 357 ~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~g-H~~~V~sva~Sp~g~~l~S 414 (524)
T 2j04_B 357 NLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVS-RETTITAIGVSRLHPMVLA 414 (524)
T ss_dssp SCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEE-CSSCEEEEECCSSCCBCEE
T ss_pred cccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeec-CCCceEEEEeCCCCCeEEE
Confidence 367899999999999999999999999998887777888 8999999999999988764
No 106
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.32 E-value=1.7e-11 Score=62.58 Aligned_cols=61 Identities=10% Similarity=0.033 Sum_probs=50.5
Q ss_pred CccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEE-----ee-ccCCCcEeEEEEc-----cCC---cEEe
Q psy7061 2 AAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRE-----LG-TANQRWVWDAAFT-----LDS---KFLL 64 (65)
Q Consensus 2 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~-~~~~~~v~~~~~~-----~~~---~~i~ 64 (65)
.+|.+.|.+++|+|+| .+++++.|+.+++|+++....+.. +. + |...|.+++|+ ||+ +.++
T Consensus 572 ~~h~~~V~svafSpdG-~lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~~g-h~~~V~sv~Fs~~~~~~Dg~~~~~l~ 646 (902)
T 2oaj_A 572 HANKGKTSAINNSNIG-FVGIAYAAGSLMLIDRRGPAIIYMENIREISGA-QSACVTCIEFVIMEYGDDGYSSILMV 646 (902)
T ss_dssp CCCSCSEEEEEECBTS-EEEEEETTSEEEEEETTTTEEEEEEEGGGTCSS-CCCCEEEEEEEEEECTTSSSEEEEEE
T ss_pred EcCCCcEEEEEecCCc-EEEEEeCCCcEEEEECCCCeEEEEeehhHhccc-cccceEEEEEEEEecCCCCCcceEEE
Confidence 4688999999999999 999999999999999987665432 21 4 78889999999 885 5665
No 107
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.30 E-value=1.7e-11 Score=57.75 Aligned_cols=61 Identities=11% Similarity=0.179 Sum_probs=51.3
Q ss_pred cccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEcc----CCcEEe
Q psy7061 4 HRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTL----DSKFLL 64 (65)
Q Consensus 4 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~----~~~~i~ 64 (65)
|...|.++.|+|+++.+++++.++.+++|+++.+..+..+...+...+.+++|+| ++.+++
T Consensus 213 h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~ 277 (437)
T 3gre_A 213 RHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVV 277 (437)
T ss_dssp GGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEE
T ss_pred CCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEE
Confidence 7789999999999999999999999999999998888877522778899996654 565665
No 108
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.29 E-value=4.5e-11 Score=56.08 Aligned_cols=48 Identities=17% Similarity=0.095 Sum_probs=39.5
Q ss_pred CCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEe-EEEEccCCcEEeC
Q psy7061 17 CRLLATTSADQTARIWNTEDFSLVRELGTANQRWVW-DAAFTLDSKFLLT 65 (65)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~i~s 65 (65)
+..+++++.|+.+++||+.+++.+.++.+ |...+. .++|+|++++++|
T Consensus 295 g~~lASgS~DgTIkIWDl~tGk~l~tL~g-H~~~vvs~vafSPDG~~LaS 343 (356)
T 2w18_A 295 DHCAAAILTSGTIAIWDLLLGQCTALLPP-VSDQHWSFVKWSGTDSHLLA 343 (356)
T ss_dssp TTEEEEEETTSCEEEEETTTCSEEEEECC-C--CCCCEEEECSSSSEEEE
T ss_pred CCEEEEEcCCCcEEEEECCCCcEEEEecC-CCCCeEEEEEECCCCCEEEE
Confidence 44678889999999999999999999987 666554 6899999999874
No 109
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.28 E-value=1.2e-10 Score=55.22 Aligned_cols=60 Identities=18% Similarity=0.111 Sum_probs=50.0
Q ss_pred ccccceEEEEECCCCCEEEEecCCC---cEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 3 AHRAYGLHCVFSPDCRLLATTSADQ---TARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 3 ~~~~~v~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
+|...+..+.|+|+++.++.++.++ .+++|++.+++.. .+.. +...+..++|+|+++.++
T Consensus 176 ~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~-~l~~-~~~~~~~~~~spdg~~la 238 (415)
T 2hqs_A 176 RSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-QVAS-FPRHNGAPAFSPDGSKLA 238 (415)
T ss_dssp EESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-EEEC-CSSCEEEEEECTTSSEEE
T ss_pred CCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE-Eeec-CCCcccCEEEcCCCCEEE
Confidence 4667899999999999998888764 8999999988765 4454 677899999999999775
No 110
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.28 E-value=6.4e-11 Score=56.07 Aligned_cols=59 Identities=22% Similarity=0.348 Sum_probs=50.9
Q ss_pred ccccceEEEEECCCCC-EEEEecCCCcEEEEECCC-CceEEEeeccCCCcEeEEEEccCCcE
Q psy7061 3 AHRAYGLHCVFSPDCR-LLATTSADQTARIWNTED-FSLVRELGTANQRWVWDAAFTLDSKF 62 (65)
Q Consensus 3 ~~~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~ 62 (65)
.|...+.++.|+|++. .+++++.++.+++|+++. ...+..+.. |...+.+++|+|++..
T Consensus 275 ~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~-h~~~v~~i~~sp~~~~ 335 (430)
T 2xyi_A 275 AHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFES-HKDEIFQVQWSPHNET 335 (430)
T ss_dssp CCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEC-CSSCEEEEEECSSCTT
T ss_pred cCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeec-CCCCEEEEEECCCCCC
Confidence 5778899999999886 688999999999999997 556677777 8899999999999864
No 111
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.27 E-value=1.4e-10 Score=54.36 Aligned_cols=57 Identities=5% Similarity=-0.077 Sum_probs=49.4
Q ss_pred eEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 8 GLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 8 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
+....|+++++.+++++.++.+++|++..+.....+.. |...|.+++|+|+++++++
T Consensus 100 ~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~s 156 (420)
T 3vl1_A 100 TAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQA-HVSEITKLKFFPSGEALIS 156 (420)
T ss_dssp EEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETTS-SSSCEEEEEECTTSSEEEE
T ss_pred eEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeeccc-ccCccEEEEECCCCCEEEE
Confidence 44456889999999999999999999998888777667 8999999999999998864
No 112
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.27 E-value=2.6e-11 Score=56.89 Aligned_cols=60 Identities=17% Similarity=0.176 Sum_probs=44.1
Q ss_pred ccceEEEEECC---CCCEEEEecCCCcEEEEECCCCceEEEeeccC--CCcEeEEEEccCCcEEe
Q psy7061 5 RAYGLHCVFSP---DCRLLATTSADQTARIWNTEDFSLVRELGTAN--QRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 5 ~~~v~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~i~ 64 (65)
...+..+.|++ ++..+++++.|+.+++|++.+++.+.++..++ ...+.+++|+|++..++
T Consensus 178 ~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lv 242 (356)
T 2w18_A 178 PPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFI 242 (356)
T ss_dssp CCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEE
T ss_pred CCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEE
Confidence 33344444444 34668889999999999999999999987622 24677789999998764
No 113
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.26 E-value=1.5e-10 Score=54.89 Aligned_cols=56 Identities=20% Similarity=0.237 Sum_probs=51.3
Q ss_pred CccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEcc
Q psy7061 2 AAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTL 58 (65)
Q Consensus 2 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 58 (65)
.+|...+.++.|+|+++.+++++.++.+++|++++++.+..+.. |...+.+++|++
T Consensus 307 ~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~-h~~~v~~~~~~~ 362 (464)
T 3v7d_B 307 SGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQG-HTALVGLLRLSD 362 (464)
T ss_dssp CCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECC-CSSCEEEEEECS
T ss_pred cCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeC-CCCcEEEEEEcC
Confidence 46788899999999999999999999999999999999988888 899999999974
No 114
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.26 E-value=1.6e-10 Score=54.73 Aligned_cols=59 Identities=20% Similarity=0.236 Sum_probs=50.5
Q ss_pred ccccceEEEEECC-CCCEEEEecCCCcEEEEECCCC---ceEEEeeccCCCcEeEEEEccCCcE
Q psy7061 3 AHRAYGLHCVFSP-DCRLLATTSADQTARIWNTEDF---SLVRELGTANQRWVWDAAFTLDSKF 62 (65)
Q Consensus 3 ~~~~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~ 62 (65)
+|...|.++.|+| ++..+++++.++.+++|+++.. ..+..+.. |...+.+++|+|++..
T Consensus 229 ~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~-~~~~v~~i~~~p~~~~ 291 (430)
T 2xyi_A 229 GHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDA-HTAEVNCLSFNPYSEF 291 (430)
T ss_dssp CCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEEC-CSSCEEEEEECSSCTT
T ss_pred CCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeec-CCCCeEEEEeCCCCCC
Confidence 5778899999999 6688999999999999999976 45666666 8899999999999874
No 115
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.26 E-value=3e-10 Score=51.41 Aligned_cols=55 Identities=11% Similarity=0.253 Sum_probs=47.6
Q ss_pred CccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEc
Q psy7061 2 AAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFT 57 (65)
Q Consensus 2 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 57 (65)
.+|...|.++.|+|+++.+++++.|+.+++|++.+++.+..+.. |...+.++.+.
T Consensus 64 ~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~-h~~~~~~~~~~ 118 (318)
T 4ggc_A 64 EQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTS-HSARVGSLSWN 118 (318)
T ss_dssp CSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEEC-CSSCEEEEEEE
T ss_pred cCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecC-ccceEEEeecC
Confidence 35777899999999999999999999999999999999888888 77777766543
No 116
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.23 E-value=5e-11 Score=54.62 Aligned_cols=62 Identities=18% Similarity=0.117 Sum_probs=51.6
Q ss_pred ccccceEEEEECCC---CCEEEEecCCCcEEEEECCCCc-eEEEeeccCCCcEeEEE------EccCCcEEeC
Q psy7061 3 AHRAYGLHCVFSPD---CRLLATTSADQTARIWNTEDFS-LVRELGTANQRWVWDAA------FTLDSKFLLT 65 (65)
Q Consensus 3 ~~~~~v~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~v~~~~------~~~~~~~i~s 65 (65)
+|...|.++.|+|+ +..+++++.++.+++|++..+. .+..+.. |...+.+++ |+|+++.+++
T Consensus 63 ~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~s~~~~~l~~ 134 (357)
T 3i2n_A 63 EKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKG-HKEIINAIDGIGGLGIGEGAPEIVT 134 (357)
T ss_dssp EESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEECC-CSSCEEEEEEESGGGCC-CCCEEEE
T ss_pred cccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEEe-cccceEEEeeccccccCCCccEEEE
Confidence 46778999999998 6899999999999999999877 7777777 899999995 4678887763
No 117
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.21 E-value=1.9e-10 Score=56.13 Aligned_cols=62 Identities=6% Similarity=-0.054 Sum_probs=49.3
Q ss_pred CccccceEEEEECCCCCEEEEecCCCcEEEEECCCCc-eEEEeeccCCCcEeEE--EEccCC-cEEeC
Q psy7061 2 AAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFS-LVRELGTANQRWVWDA--AFTLDS-KFLLT 65 (65)
Q Consensus 2 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~v~~~--~~~~~~-~~i~s 65 (65)
.+|...+.+++|+++ ..+++++.|+.+++|++.++. ....+.. |...|.++ +|+|++ .+++|
T Consensus 263 ~~h~~~v~sv~~s~~-~~lasgs~DgtV~lWD~~~~~~~~~~~~~-H~~~V~sv~~~~s~~g~~~laS 328 (524)
T 2j04_B 263 SLADSLITTFDFLSP-TTVVCGFKNGFVAEFDLTDPEVPSFYDQV-HDSYILSVSTAYSDFEDTVVST 328 (524)
T ss_dssp CCTTTCEEEEEESSS-SEEEEEETTSEEEEEETTBCSSCSEEEEC-SSSCEEEEEEECCTTSCCEEEE
T ss_pred EcCCCCEEEEEecCC-CeEEEEeCCCEEEEEECCCCCCceEEeec-ccccEEEEEEEcCCCCCeEEEE
Confidence 357788999999985 479999999999999998653 3445666 88999999 578887 66664
No 118
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.19 E-value=6.5e-10 Score=52.19 Aligned_cols=54 Identities=17% Similarity=0.206 Sum_probs=49.3
Q ss_pred cccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEcc
Q psy7061 4 HRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTL 58 (65)
Q Consensus 4 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 58 (65)
|...|.++.|+|++..+++++.++.+++|++.+++.+..+.. |...+.+++|++
T Consensus 133 ~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-~~~~v~~~~~~~ 186 (401)
T 4aez_A 133 ESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAG-HQARVGCLSWNR 186 (401)
T ss_dssp TTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECC-CSSCEEEEEEET
T ss_pred CCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecC-CCCceEEEEECC
Confidence 677899999999999999999999999999999998888887 899999999954
No 119
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.17 E-value=5.5e-10 Score=57.66 Aligned_cols=61 Identities=7% Similarity=-0.024 Sum_probs=52.9
Q ss_pred ccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 3 AHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 3 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
+|...+..+.|+|+++.++.++.++.+++|++.+++....... +...+..++|+|++++++
T Consensus 376 ~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~-~~~~v~~~~~SpDG~~la 436 (1045)
T 1k32_A 376 ENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERS-REAMITDFTISDNSRFIA 436 (1045)
T ss_dssp CCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEEC-SSSCCCCEEECTTSCEEE
T ss_pred CCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccC-CCCCccceEECCCCCeEE
Confidence 3556788999999999999999999999999998887766656 778889999999999876
No 120
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.15 E-value=2.9e-10 Score=53.44 Aligned_cols=48 Identities=13% Similarity=-0.069 Sum_probs=41.4
Q ss_pred CCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 17 CRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
+.++++++.++.+++|+..++.....+.. +...|.+++|+|+|++|++
T Consensus 329 ~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~-~~~~V~svafspdG~~LA~ 376 (393)
T 4gq1_A 329 DYFATAHSQHGLIQLINTYEKDSNSIPIQ-LGMPIVDFCWHQDGSHLAI 376 (393)
T ss_dssp TEEEEEETTTTEEEEEETTCTTCCEEEEE-CSSCEEEEEECTTSSEEEE
T ss_pred CEEEEEECCCCEEEEEECCCCcEEEEecC-CCCcEEEEEEcCCCCEEEE
Confidence 34667888999999999998888777777 7889999999999999874
No 121
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.13 E-value=1e-09 Score=51.69 Aligned_cols=61 Identities=3% Similarity=0.106 Sum_probs=53.9
Q ss_pred ccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 3 AHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 3 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
+|.+.+..+.|++++..+++++.++.+++|++++++.+..+.. +...+.+++|+|+++.++
T Consensus 167 ~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~ 227 (433)
T 3bws_A 167 KKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDL-TGKWSKILLYDPIRDLVY 227 (433)
T ss_dssp TTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEEC-SSSSEEEEEEETTTTEEE
T ss_pred ccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcC-CCCCeeEEEEcCCCCEEE
Confidence 4667889999999999999999999999999998888888877 788999999999998774
No 122
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.10 E-value=2.6e-09 Score=50.70 Aligned_cols=60 Identities=18% Similarity=0.126 Sum_probs=46.6
Q ss_pred ccccceEEEEECCCCCEEE-EecCCC--cEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 3 AHRAYGLHCVFSPDCRLLA-TTSADQ--TARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 3 ~~~~~v~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
.+...+..+.|+|+++.++ +++.++ .+++|++.++.. ..+.. +...+..++|+|+++.++
T Consensus 220 ~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~-~~~~~~~~~~spdg~~l~ 282 (415)
T 2hqs_A 220 SFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-RQVTD-GRSNNTEPTWFPDSQNLA 282 (415)
T ss_dssp CCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EECCC-CSSCEEEEEECTTSSEEE
T ss_pred cCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE-EeCcC-CCCcccceEECCCCCEEE
Confidence 3556788999999999776 555554 489999987765 35555 678899999999999775
No 123
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.10 E-value=1.8e-09 Score=51.66 Aligned_cols=61 Identities=13% Similarity=0.106 Sum_probs=47.7
Q ss_pred ccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeecc------CCCcEeEEEEccCCcEEe
Q psy7061 3 AHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTA------NQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 3 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~v~~~~~~~~~~~i~ 64 (65)
+|...+.+++|+|+++.+++++.++.+++|+.+ +.....+..+ |...+.+++|++++.+++
T Consensus 190 ~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~ 256 (434)
T 2oit_A 190 PSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAI 256 (434)
T ss_dssp CGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEE
T ss_pred CCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecCceEEE
Confidence 366789999999999999999999999999998 4444444320 223789999999887763
No 124
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.10 E-value=2.3e-09 Score=50.88 Aligned_cols=59 Identities=19% Similarity=0.281 Sum_probs=50.2
Q ss_pred cccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEee----ccCCCcEeEEEEccCCcEEe
Q psy7061 4 HRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELG----TANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 4 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~v~~~~~~~~~~~i~ 64 (65)
|...|.++.|+ ++.+++++.++.+++|++.+++.+..+. ..+...+.+++|+|++..++
T Consensus 361 ~~~~v~~~~~~--~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la 423 (445)
T 2ovr_B 361 HQSAVTCLQFN--KNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCA 423 (445)
T ss_dssp CSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEE
T ss_pred CCCCEEEEEEC--CCEEEEEeCCCeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEE
Confidence 77789999995 5789999999999999999998887772 12778999999999988875
No 125
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.09 E-value=3.8e-10 Score=50.40 Aligned_cols=61 Identities=13% Similarity=-0.060 Sum_probs=48.6
Q ss_pred ccccceEEEEECCCCCEEEEecCCCcEEEEECCC-CceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 3 AHRAYGLHCVFSPDCRLLATTSADQTARIWNTED-FSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 3 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
.|...+..+.|+|+++.++++. ++.+++|++.+ ++.......++...+.+++|+|+++.++
T Consensus 39 ~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~ 100 (297)
T 2ojh_A 39 QTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYA 100 (297)
T ss_dssp EESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEE
T ss_pred cCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECCCCCEEE
Confidence 3556788999999999888776 77999999998 7766555442347788999999999876
No 126
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.02 E-value=1.3e-08 Score=47.39 Aligned_cols=57 Identities=16% Similarity=0.172 Sum_probs=47.8
Q ss_pred cceEEEEECCCCCEE-EEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 6 AYGLHCVFSPDCRLL-ATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 6 ~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
..+.++.|+|+++.+ ++++.++.+++|++.+++.+..+.. ...+.+++|+|+++.++
T Consensus 32 ~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~--~~~v~~~~~spdg~~l~ 89 (391)
T 1l0q_A 32 SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPA--GSSPQGVAVSPDGKQVY 89 (391)
T ss_dssp SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEEC--SSSEEEEEECTTSSEEE
T ss_pred CCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEEC--CCCccceEECCCCCEEE
Confidence 457899999999876 6777899999999999888877775 34899999999998764
No 127
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.02 E-value=7e-09 Score=48.28 Aligned_cols=34 Identities=24% Similarity=0.160 Sum_probs=31.6
Q ss_pred cccceEEEEECCCCCEEEEecCCCcEEEEECCCC
Q psy7061 4 HRAYGLHCVFSPDCRLLATTSADQTARIWNTEDF 37 (65)
Q Consensus 4 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 37 (65)
|...|.++.|+|+++.+++++.++.+++|++...
T Consensus 239 h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~ 272 (355)
T 3vu4_A 239 DRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFND 272 (355)
T ss_dssp CCSCEEEEEECTTSCEEEEEETTCEEEEEESSCC
T ss_pred CCCcEEEEEECCCCCEEEEEECCCEEEEEEccCC
Confidence 8889999999999999999999999999998754
No 128
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.01 E-value=6.9e-09 Score=49.22 Aligned_cols=55 Identities=24% Similarity=0.335 Sum_probs=46.7
Q ss_pred CccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccC
Q psy7061 2 AAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLD 59 (65)
Q Consensus 2 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 59 (65)
.+|...|.++.| +++.+++++.++.+++|++.+++.+..+.. |...+.+++|+++
T Consensus 170 ~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~-h~~~v~~l~~~~~ 224 (435)
T 1p22_A 170 TGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIH-HCEAVLHLRFNNG 224 (435)
T ss_dssp CCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEEECC-CCSCEEEEECCTT
T ss_pred cCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEEEEEcC-CCCcEEEEEEcCC
Confidence 467888888888 678899999999999999998888888887 8888999988753
No 129
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=98.93 E-value=7.3e-09 Score=51.70 Aligned_cols=58 Identities=12% Similarity=0.057 Sum_probs=46.5
Q ss_pred cceEEEEECCCCCEEEEecC-CC-----cEEEEECCCCceEEEeeccCC------------------------CcEeEEE
Q psy7061 6 AYGLHCVFSPDCRLLATTSA-DQ-----TARIWNTEDFSLVRELGTANQ------------------------RWVWDAA 55 (65)
Q Consensus 6 ~~v~~~~~~~~~~~~~~~~~-~~-----~~~~~~~~~~~~~~~~~~~~~------------------------~~v~~~~ 55 (65)
..+..+.|+|+|+.+++++. ++ .+++|++.+++....... +. ..+..++
T Consensus 37 ~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (741)
T 2ecf_A 37 PTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDS-KVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ 115 (741)
T ss_dssp CCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECG-GGTC--------------------CCEESCCCE
T ss_pred CCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccch-hhcccccccccchhhhhhhhhhhccccCcceeE
Confidence 35889999999999988887 77 899999998877655543 22 2378999
Q ss_pred EccCCcEEe
Q psy7061 56 FTLDSKFLL 64 (65)
Q Consensus 56 ~~~~~~~i~ 64 (65)
|+|++++++
T Consensus 116 ~SpDg~~l~ 124 (741)
T 2ecf_A 116 WSPDAQRLL 124 (741)
T ss_dssp ECTTSSEEE
T ss_pred ECCCCCEEE
Confidence 999999876
No 130
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.93 E-value=7.8e-09 Score=49.08 Aligned_cols=55 Identities=16% Similarity=0.228 Sum_probs=44.8
Q ss_pred CccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEcc
Q psy7061 2 AAHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTL 58 (65)
Q Consensus 2 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 58 (65)
.+|.+.+.. .+.++++.+++++.++.+++|++.+++.+..+.. |...|.+++|++
T Consensus 115 ~~h~~~v~~-~~~~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~-h~~~v~~~~~~~ 169 (445)
T 2ovr_B 115 KGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVG-HTGGVWSSQMRD 169 (445)
T ss_dssp ECSTTSCEE-EEEEETTEEEEEETTSCEEEEETTTCCEEEECCC-CSSCEEEEEEET
T ss_pred cccCCCcEE-EEEEcCCEEEEEECCCcEEEEECCCCcEEEEEcC-CCCCEEEEEecC
Confidence 457766433 2444688999999999999999999999888888 899999999874
No 131
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=98.93 E-value=2.9e-08 Score=47.15 Aligned_cols=56 Identities=16% Similarity=0.249 Sum_probs=47.0
Q ss_pred cccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 4 HRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 4 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
|...|.++.+ +++.+++++.++.+++|++.+++....+.. |...|.+++| ++..++
T Consensus 132 ~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~-h~~~v~~l~~--~~~~l~ 187 (435)
T 1p22_A 132 TSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTG-HTGSVLCLQY--DERVII 187 (435)
T ss_dssp SCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEEEECC-CSSCEEEEEC--CSSEEE
T ss_pred CCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCeEEEEEcC-CCCcEEEEEE--CCCEEE
Confidence 4456777776 688999999999999999999998888888 8999999988 555654
No 132
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=98.93 E-value=2e-08 Score=44.87 Aligned_cols=61 Identities=18% Similarity=0.169 Sum_probs=46.7
Q ss_pred ccccceEEEEECCCCCEEEEec-CCCcEEEEECC-CCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 3 AHRAYGLHCVFSPDCRLLATTS-ADQTARIWNTE-DFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 3 ~~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
.+...+..+.|+|+++.++.++ .++.+.+|.++ .......+.. +...+..++|+|++++++
T Consensus 170 ~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~ 232 (297)
T 2ojh_A 170 HGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITD-SAYGDWFPHPSPSGDKVV 232 (297)
T ss_dssp CSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCC-CSEEEEEEEECTTSSEEE
T ss_pred cCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEec-CCcccCCeEECCCCCEEE
Confidence 3556788999999998776555 57888888876 4555556665 677889999999999875
No 133
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=98.91 E-value=2.5e-09 Score=52.25 Aligned_cols=60 Identities=12% Similarity=0.066 Sum_probs=47.1
Q ss_pred ccccceEEEEECCCCCEEEEecCCC--cEEEEECCCCceEEEeeccCCCcEeEEE--------EccCCcEEe
Q psy7061 3 AHRAYGLHCVFSPDCRLLATTSADQ--TARIWNTEDFSLVRELGTANQRWVWDAA--------FTLDSKFLL 64 (65)
Q Consensus 3 ~~~~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~v~~~~--------~~~~~~~i~ 64 (65)
++.+.+..+.|+|+|+.++++..++ .+++|++.+++.. .+.. +...+..++ |+|++..++
T Consensus 192 ~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~spdg~~~~ 261 (582)
T 3o4h_A 192 SGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLEL-PSKDFSSYRPTAITWLGYLPDGRLAV 261 (582)
T ss_dssp CSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCC-SCSHHHHHCCSEEEEEEECTTSCEEE
T ss_pred cCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccC-CCcChhhhhhccccceeEcCCCcEEE
Confidence 4666788999999999998777777 7999999887776 5555 666666666 999996654
No 134
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=98.88 E-value=4.2e-08 Score=46.28 Aligned_cols=60 Identities=10% Similarity=0.083 Sum_probs=48.5
Q ss_pred ccccceEEEEECCCCCEE-EEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 3 AHRAYGLHCVFSPDCRLL-ATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 3 ~~~~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
.|...+..+.|+|+++.+ +++..++.+++|++++++.+..+.. ...+..++|+|+++.++
T Consensus 209 ~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~--~~~~~~~~~~~~g~~l~ 269 (433)
T 3bws_A 209 LTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDK--IGLPRGLLLSKDGKELY 269 (433)
T ss_dssp CSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCC--CSEEEEEEECTTSSEEE
T ss_pred CCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecC--CCCceEEEEcCCCCEEE
Confidence 356678899999998876 5555789999999998887766664 45689999999998775
No 135
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=98.87 E-value=2.8e-08 Score=49.71 Aligned_cols=60 Identities=5% Similarity=0.005 Sum_probs=45.1
Q ss_pred ccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCc----------------EeEEEEccCCcEEe
Q psy7061 3 AHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRW----------------VWDAAFTLDSKFLL 64 (65)
Q Consensus 3 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------v~~~~~~~~~~~i~ 64 (65)
.+...+..+.|+|+|+.++.++. +.+++|++.++........ +... +..++|+|+++.|+
T Consensus 149 ~~~~~~~~~~~SPDG~~la~~~~-~~i~~~d~~~g~~~~~~~~-~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~ 224 (741)
T 2ecf_A 149 HGEGFATDAKLSPKGGFVSFIRG-RNLWVIDLASGRQMQLTAD-GSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIA 224 (741)
T ss_dssp CSSSCEEEEEECTTSSEEEEEET-TEEEEEETTTTEEEECCCC-CCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEE
T ss_pred cCCcccccccCCCCCCEEEEEeC-CcEEEEecCCCCEEEeccC-CccceeccccceeeeeccccccceEECCCCCEEE
Confidence 35567889999999998887764 5899999988766544443 2222 47799999999876
No 136
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=98.84 E-value=2.5e-07 Score=43.21 Aligned_cols=56 Identities=25% Similarity=0.246 Sum_probs=46.7
Q ss_pred cceEEEEECCCCCEE-EEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEE
Q psy7061 6 AYGLHCVFSPDCRLL-ATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFL 63 (65)
Q Consensus 6 ~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i 63 (65)
..+..+.|+|+++.+ +++..++.+++|++.+++.+..+.. ...+..++|+|+++.+
T Consensus 116 ~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~--~~~~~~~~~~~dg~~l 172 (391)
T 1l0q_A 116 KSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSV--GRSPKGIAVTPDGTKV 172 (391)
T ss_dssp SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC--CSSEEEEEECTTSSEE
T ss_pred CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEec--CCCcceEEECCCCCEE
Confidence 457889999999876 7788899999999998888777765 3567999999999876
No 137
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=98.83 E-value=4.3e-08 Score=50.94 Aligned_cols=60 Identities=20% Similarity=0.211 Sum_probs=47.8
Q ss_pred ccccceEEEEECCCCCEEEEecCCC----------cEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 3 AHRAYGLHCVFSPDCRLLATTSADQ----------TARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 3 ~~~~~v~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
+|.+.+..+.|+|++++++.++.+. .+++|++.+++ ...+.. +...+..++|+|+++.++
T Consensus 418 ~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~-~~~~~~~~~~spdG~~l~ 487 (1045)
T 1k32_A 418 SREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATT-ENSHDYAPAFDADSKNLY 487 (1045)
T ss_dssp CSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECSC-SSSBEEEEEECTTSCEEE
T ss_pred CCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc-EEEeeC-CCcccCCceEcCCCCEEE
Confidence 4556678899999999887776543 89999998776 555655 677888999999999875
No 138
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=98.80 E-value=1.2e-08 Score=50.74 Aligned_cols=56 Identities=11% Similarity=-0.041 Sum_probs=43.0
Q ss_pred ceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCc------------------EeEEEEccCCcEEe
Q psy7061 7 YGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRW------------------VWDAAFTLDSKFLL 64 (65)
Q Consensus 7 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------v~~~~~~~~~~~i~ 64 (65)
.+..+.|+|+|+.++.++. +.+++|++.++........ +... +..++|+|+++.|+
T Consensus 115 ~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~-~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la 188 (723)
T 1xfd_A 115 KLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVST-GKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLA 188 (723)
T ss_dssp CCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECC-CBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEE
T ss_pred cccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecC-CCCCceECcccceeEEEEeccCcceEEECCCCCEEE
Confidence 4677899999998888775 7899999988776655443 2322 37899999999886
No 139
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=98.77 E-value=2.6e-07 Score=45.52 Aligned_cols=55 Identities=11% Similarity=0.077 Sum_probs=47.0
Q ss_pred eEEEEECCCCCEEEEecCCCcEEEEEC--CCCceEEEeeccCCCcEeEEEEcc----CCcEEe
Q psy7061 8 GLHCVFSPDCRLLATTSADQTARIWNT--EDFSLVRELGTANQRWVWDAAFTL----DSKFLL 64 (65)
Q Consensus 8 v~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~v~~~~~~~----~~~~i~ 64 (65)
+..+.|+|+++.+.+++.++.+.+|++ .+++.+..+.. ......++|+| ++++++
T Consensus 181 ~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~--g~~p~~va~sp~~~~dg~~l~ 241 (543)
T 1nir_A 181 VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKI--GIEARSVESSKFKGYEDRYTI 241 (543)
T ss_dssp EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEEC--CSEEEEEEECCSTTCTTTEEE
T ss_pred cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEec--CCCcceEEeCCCcCCCCCEEE
Confidence 667889999999999999999999999 77777777663 56789999999 999875
No 140
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=98.76 E-value=2.9e-08 Score=48.64 Aligned_cols=54 Identities=13% Similarity=-0.070 Sum_probs=43.6
Q ss_pred EEEEECCCCCEEEEecCC----CcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 9 LHCVFSPDCRLLATTSAD----QTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
..+.|+|+|+.++.++.+ ..+++|++.+++.. .+.. +...+..++|+|+|+.|+
T Consensus 153 ~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~-~l~~-~~~~~~~~~~SpDG~~l~ 210 (582)
T 3o4h_A 153 FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLR-VFDS-GEGSFSSASISPGMKVTA 210 (582)
T ss_dssp CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCE-EECC-SSCEEEEEEECTTSCEEE
T ss_pred ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCce-Eeec-CCCccccceECCCCCEEE
Confidence 567899999998876665 67999998877755 4555 678889999999999886
No 141
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=98.73 E-value=1.8e-07 Score=47.25 Aligned_cols=61 Identities=13% Similarity=0.042 Sum_probs=43.5
Q ss_pred ccccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcE-----------------eEEEEccCCcEEe
Q psy7061 3 AHRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWV-----------------WDAAFTLDSKFLL 64 (65)
Q Consensus 3 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-----------------~~~~~~~~~~~i~ 64 (65)
.+.+.+....|+|+|+.++.+. ++.+++|+..++.........+...+ ..+.|||||+.|+
T Consensus 109 ~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la 186 (740)
T 4a5s_A 109 RIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLA 186 (740)
T ss_dssp CCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEE
T ss_pred cCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEE
Confidence 4556788999999999888774 67899999987765443222122222 3488999999886
No 142
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=98.72 E-value=9.5e-08 Score=47.67 Aligned_cols=57 Identities=16% Similarity=0.159 Sum_probs=43.7
Q ss_pred eEEEEECCCCCEEEEec---------------------------------CCCcEEEEECCCCceEEEeec-cCCCcEeE
Q psy7061 8 GLHCVFSPDCRLLATTS---------------------------------ADQTARIWNTEDFSLVRELGT-ANQRWVWD 53 (65)
Q Consensus 8 v~~~~~~~~~~~~~~~~---------------------------------~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~ 53 (65)
+..+.|+|+++.++.++ .+..+++|++.++........ .+...+..
T Consensus 183 ~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~ 262 (706)
T 2z3z_A 183 EKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTN 262 (706)
T ss_dssp CCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEE
T ss_pred CceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEee
Confidence 57889999999888776 345789999988775444322 25677899
Q ss_pred EEEccCCcEEe
Q psy7061 54 AAFTLDSKFLL 64 (65)
Q Consensus 54 ~~~~~~~~~i~ 64 (65)
++|+|+++.++
T Consensus 263 ~~~spdg~~l~ 273 (706)
T 2z3z_A 263 LSWSPDENILY 273 (706)
T ss_dssp EEECTTSSEEE
T ss_pred EEEECCCCEEE
Confidence 99999999775
No 143
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=98.70 E-value=4.2e-07 Score=41.97 Aligned_cols=57 Identities=14% Similarity=0.211 Sum_probs=42.0
Q ss_pred ceEEEEECCCCCEE-EEecCCCcEEEEECCCC---ceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 7 YGLHCVFSPDCRLL-ATTSADQTARIWNTEDF---SLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 7 ~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
.+..+.|+|+++.+ ++...++.+.+|+++.. ..+..+.. +...+..++|+|++++++
T Consensus 241 ~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~-~~~~~~~~~~spdg~~l~ 301 (347)
T 3hfq_A 241 GAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQIST-EGDFPRDFDLDPTEAFVV 301 (347)
T ss_dssp EEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEEC-SSSCCCEEEECTTSSEEE
T ss_pred cceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEec-CCCCcCeEEECCCCCEEE
Confidence 46678999999876 55666889999998732 33334444 456678999999998765
No 144
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=98.69 E-value=1.7e-08 Score=50.24 Aligned_cols=58 Identities=10% Similarity=-0.062 Sum_probs=43.5
Q ss_pred ccceEEEEECCCCCEEEEecCCCcEEEEECCC-----CceEEEeeccCCCc--------------EeEEEEccCCcEEe
Q psy7061 5 RAYGLHCVFSPDCRLLATTSADQTARIWNTED-----FSLVRELGTANQRW--------------VWDAAFTLDSKFLL 64 (65)
Q Consensus 5 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~--------------v~~~~~~~~~~~i~ 64 (65)
...+..+.|+|+++.++.. .++.+++|++.+ +........ +... +..++|+|++++|+
T Consensus 120 ~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~-~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la 196 (706)
T 2z3z_A 120 NEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTID-GTETLVYGQAVHQREFGIEKGTFWSPKGSCLA 196 (706)
T ss_dssp TTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSC-CBTTEEESSCCGGGCTTCCCSEEECTTSSEEE
T ss_pred cccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccC-CCCCeEcccchhhhhcCCCceEEECCCCCEEE
Confidence 3456778999999988875 578999999987 665544433 2222 47899999999886
No 145
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=98.68 E-value=9.3e-08 Score=47.82 Aligned_cols=58 Identities=12% Similarity=0.005 Sum_probs=42.3
Q ss_pred cceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcE-----------------eEEEEccCCcEEe
Q psy7061 6 AYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWV-----------------WDAAFTLDSKFLL 64 (65)
Q Consensus 6 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-----------------~~~~~~~~~~~i~ 64 (65)
..+..+.|+|+|+.++.+. ++.+++|++.++.........+...+ ..++|+|+|+.|+
T Consensus 110 ~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la 184 (719)
T 1z68_A 110 RPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLA 184 (719)
T ss_dssp SSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEE
T ss_pred cccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEE
Confidence 3467799999999888775 67999999987766543322122222 4899999999886
No 146
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=98.67 E-value=9.1e-08 Score=44.60 Aligned_cols=53 Identities=13% Similarity=0.067 Sum_probs=39.4
Q ss_pred EEECCCCCEEEEecC-CC--cEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 11 CVFSPDCRLLATTSA-DQ--TARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 11 ~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
..|+|+++.++..+. ++ .+.+|++.+++....... +...+...+|+|+++.|+
T Consensus 41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~-~~~~~~~~~~spdg~~l~ 96 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEG-RGDNTFGGFLSPDDDALF 96 (388)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCS-SCBCSSSCEECTTSSEEE
T ss_pred ccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeC-CCCCccceEEcCCCCEEE
Confidence 679999998877776 55 488888887776655544 445555678999998875
No 147
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=98.66 E-value=3e-07 Score=45.65 Aligned_cols=59 Identities=17% Similarity=0.130 Sum_probs=42.6
Q ss_pred ccceEEEEECCCCCEEEEecCC--------CcEEEEECC-CC---ceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 5 RAYGLHCVFSPDCRLLATTSAD--------QTARIWNTE-DF---SLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 5 ~~~v~~~~~~~~~~~~~~~~~~--------~~~~~~~~~-~~---~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
...+..+.|+|+|+.++..+.+ ..+++|++. ++ ........ +...+..++|+|+++.++
T Consensus 187 ~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~-~~~~~~~~~~spdg~l~~ 257 (662)
T 3azo_A 187 HRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGG-PEEAIAQAEWAPDGSLIV 257 (662)
T ss_dssp SSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEE-TTBCEEEEEECTTSCEEE
T ss_pred CCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCC-CCceEcceEECCCCeEEE
Confidence 3456678899999988766643 368999998 46 33333333 567899999999998554
No 148
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=98.65 E-value=7.7e-07 Score=40.61 Aligned_cols=54 Identities=6% Similarity=0.072 Sum_probs=43.5
Q ss_pred ceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 7 YGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 7 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
.+..+.|+|+++.++.+ ++.+.+|++.+++.+..+.. ...+..++|+|+++.++
T Consensus 242 ~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~ 295 (337)
T 1pby_B 242 FYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPL--PHSYYSVNVSTDGSTVW 295 (337)
T ss_dssp CEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEEC--SSCCCEEEECTTSCEEE
T ss_pred ceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecC--CCceeeEEECCCCCEEE
Confidence 45678999999988776 68999999998887766664 35678999999998765
No 149
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=98.62 E-value=2.5e-07 Score=46.26 Aligned_cols=56 Identities=13% Similarity=0.157 Sum_probs=41.4
Q ss_pred EEEEECCCCCEEEEecCCC----------------------------------cEEEEECCCCceEEEeecc-----CCC
Q psy7061 9 LHCVFSPDCRLLATTSADQ----------------------------------TARIWNTEDFSLVRELGTA-----NQR 49 (65)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~----------------------------------~~~~~~~~~~~~~~~~~~~-----~~~ 49 (65)
..+.|+|+|+.++.++.+. .+++|++.++.....+..+ +..
T Consensus 176 ~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~ 255 (723)
T 1xfd_A 176 IAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREY 255 (723)
T ss_dssp EEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSE
T ss_pred ceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccc
Confidence 6799999999887776432 6888998877654444431 256
Q ss_pred cEeEEEEccCCcEEe
Q psy7061 50 WVWDAAFTLDSKFLL 64 (65)
Q Consensus 50 ~v~~~~~~~~~~~i~ 64 (65)
.+..++|+|+++.++
T Consensus 256 ~~~~~~~SpDg~~l~ 270 (723)
T 1xfd_A 256 YITMVKWATSTKVAV 270 (723)
T ss_dssp EEEEEEESSSSEEEE
T ss_pred eeEEEEEeCCCeEEE
Confidence 788999999998774
No 150
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=98.62 E-value=1.2e-07 Score=46.99 Aligned_cols=59 Identities=14% Similarity=0.107 Sum_probs=45.3
Q ss_pred cccceEEEEECCCCCEEEEecCC----------CcEEEEECCC------CceEEEee-ccCCCcEeEEEEccCCcEEe
Q psy7061 4 HRAYGLHCVFSPDCRLLATTSAD----------QTARIWNTED------FSLVRELG-TANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 4 ~~~~v~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~------~~~~~~~~-~~~~~~v~~~~~~~~~~~i~ 64 (65)
|...+..+.|+|+++.++..+.+ ..+++|++.. +.. ..+. . +...+..++|+|+|++|+
T Consensus 128 ~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~l~~~-~~~~~~~~~~SpDG~~la 203 (662)
T 3azo_A 128 GGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAV-RELSDD-AHRFVTGPRLSPDGRQAV 203 (662)
T ss_dssp TCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGS-EESSCS-CSSEECCCEECTTSSEEE
T ss_pred CCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCce-eEEEec-CCCcccCceECCCCCEEE
Confidence 45567889999999988877765 4788999887 444 3444 4 557788899999999886
No 151
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=98.62 E-value=2.7e-07 Score=46.42 Aligned_cols=57 Identities=16% Similarity=0.054 Sum_probs=41.7
Q ss_pred cceEEEEECCCCCEEEEecCCC-----cEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 6 AYGLHCVFSPDCRLLATTSADQ-----TARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 6 ~~v~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
..+..+.|+|+++.++.+..++ .+++|++.+++....... ...+..++|+|+++.|+
T Consensus 125 ~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~--~~~~~~~~wspDg~~l~ 186 (710)
T 2xdw_A 125 VALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLE--RVKFSCMAWTHDGKGMF 186 (710)
T ss_dssp EEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEE--EECSCCEEECTTSSEEE
T ss_pred EEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCccccc--CcccceEEEEeCCCEEE
Confidence 3577889999999876554322 799999998877654332 22367799999998875
No 152
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=98.60 E-value=7.7e-07 Score=40.69 Aligned_cols=58 Identities=17% Similarity=0.095 Sum_probs=42.4
Q ss_pred ccceEEEEECCCCCEEEEecCC-CcEEEEECC--CCce--EEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 5 RAYGLHCVFSPDCRLLATTSAD-QTARIWNTE--DFSL--VRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 5 ~~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~--~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
...+..+.|+|+++.++++..+ +.+.+|+++ ++.. +..+.. ...+..++|+|+++.++
T Consensus 37 ~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~ 99 (343)
T 1ri6_A 37 PGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESAL--PGSLTHISTDHQGQFVF 99 (343)
T ss_dssp SSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEC--SSCCSEEEECTTSSEEE
T ss_pred CCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeecccccc--CCCCcEEEEcCCCCEEE
Confidence 3456788999999977777765 899999987 4442 333333 33788999999998764
No 153
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=98.58 E-value=1e-06 Score=40.61 Aligned_cols=55 Identities=22% Similarity=0.230 Sum_probs=39.5
Q ss_pred ceEEEEECCCCCEEEEecCC---C--cEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 7 YGLHCVFSPDCRLLATTSAD---Q--TARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 7 ~v~~~~~~~~~~~~~~~~~~---~--~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
.+..+.|+|+|+.++..+.+ + .++++++..++....... .. +..++|+|+++.|+
T Consensus 60 ~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~--~~-~~~~~wspdg~~l~ 119 (347)
T 2gop_A 60 NATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEA--KN-IRSLEWNEDSRKLL 119 (347)
T ss_dssp SCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEE--SE-EEEEEECTTSSEEE
T ss_pred cCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcC--CC-ccceeECCCCCEEE
Confidence 35668999999987766543 2 377778877666544443 33 89999999998775
No 154
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=98.58 E-value=1.8e-06 Score=39.57 Aligned_cols=56 Identities=14% Similarity=0.195 Sum_probs=43.5
Q ss_pred ceEEEEECCCCCEE-EEecCCCcEEEEECCCCce---EEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 7 YGLHCVFSPDCRLL-ATTSADQTARIWNTEDFSL---VRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 7 ~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
.+..+.|+|+++.+ ++...++.+.+|++.+++. +..+.. ...+..++|+|++++++
T Consensus 177 ~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~--~~~~~~~~~spdg~~l~ 236 (331)
T 3u4y_A 177 RPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGT--NNLPGTIVVSRDGSTVY 236 (331)
T ss_dssp SEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEEC--SSCCCCEEECTTSSEEE
T ss_pred CccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccC--CCCCceEEECCCCCEEE
Confidence 46788999999854 5555688999999988776 656554 46678899999999654
No 155
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=98.57 E-value=2.8e-06 Score=39.08 Aligned_cols=58 Identities=10% Similarity=0.003 Sum_probs=45.1
Q ss_pred cceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 6 AYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 6 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
..+..+.|+++++.+++...++.+.+|+..++........ +...+..++++|+++.++
T Consensus 45 ~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~-~~~~~~~i~~~~dg~l~v 102 (333)
T 2dg1_A 45 LQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVS-HKANPAAIKIHKDGRLFV 102 (333)
T ss_dssp CCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEEC-SSSSEEEEEECTTSCEEE
T ss_pred ccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeC-CCCCcceEEECCCCcEEE
Confidence 4567889999999777778888999999887765544434 567799999999998765
No 156
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=98.53 E-value=2.3e-06 Score=39.22 Aligned_cols=54 Identities=22% Similarity=0.185 Sum_probs=40.4
Q ss_pred EEEECCCCCEEEEe-cCCCcEEEEECCCCce-EEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 10 HCVFSPDCRLLATT-SADQTARIWNTEDFSL-VRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 10 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
.+.|+|+++.++.+ ..++.+.+|+..++.. ...... +......++|+|++++++
T Consensus 44 ~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~ 99 (331)
T 3u4y_A 44 DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQE-GQSSMADVDITPDDQFAV 99 (331)
T ss_dssp EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEE-CSSCCCCEEECTTSSEEE
T ss_pred eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEeccc-CCCCccceEECCCCCEEE
Confidence 88999999865444 4488999999988876 555554 445444499999998775
No 157
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=98.53 E-value=1.9e-07 Score=46.86 Aligned_cols=59 Identities=12% Similarity=-0.034 Sum_probs=40.7
Q ss_pred cccceEEEEECCCCCEEE-----EecCCCcEEEEECCCCceE-EEeeccCCCcEeEEEEccCCcEEe
Q psy7061 4 HRAYGLHCVFSPDCRLLA-----TTSADQTARIWNTEDFSLV-RELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 4 ~~~~v~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
|...+..+.|+|+|+.++ .++.+..+++|++.+++.+ ..... ......++|+|+++.++
T Consensus 119 ~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~--~~~~~~~~wspDg~~l~ 183 (695)
T 2bkl_A 119 GTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIE--GGKYATPKWTPDSKGFY 183 (695)
T ss_dssp SCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBS--CCTTCCCEECTTSSEEE
T ss_pred CCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcccC--cccccceEEecCCCEEE
Confidence 444678899999999877 3333468999999987754 11111 11126899999998775
No 158
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=98.50 E-value=4.7e-06 Score=38.76 Aligned_cols=56 Identities=18% Similarity=0.139 Sum_probs=39.4
Q ss_pred ceEEEEECCCCCEEEEecC--CCcEEEEECC--CCc--eEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 7 YGLHCVFSPDCRLLATTSA--DQTARIWNTE--DFS--LVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 7 ~v~~~~~~~~~~~~~~~~~--~~~~~~~~~~--~~~--~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
....+.|+|+++++..+.. ++.+.+|+++ ++. .+.... ....+..++|+|++++++
T Consensus 260 ~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~--~g~~~~~~~~spdg~~l~ 321 (361)
T 3scy_A 260 GSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQL--TGIHPRNFIITPNGKYLL 321 (361)
T ss_dssp CEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEE--CSSCCCEEEECTTSCEEE
T ss_pred CcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEec--CCCCCceEEECCCCCEEE
Confidence 3568899999998755554 4789999986 333 222222 245678899999999775
No 159
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=98.50 E-value=8.2e-07 Score=40.52 Aligned_cols=56 Identities=20% Similarity=0.232 Sum_probs=43.4
Q ss_pred ceEEEEECCCCCEEEEec------------CCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 7 YGLHCVFSPDCRLLATTS------------ADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 7 ~v~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
.+..+.|+|+++.++.+. .++.+.+|++.+++....+.. ...+..++|+|++++++
T Consensus 83 ~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~ 150 (337)
T 1pby_B 83 SLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA--PRQITMLAWARDGSKLY 150 (337)
T ss_dssp CTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC--CSSCCCEEECTTSSCEE
T ss_pred cccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC--CCCcceeEECCCCCEEE
Confidence 456788999998777665 568999999988877766653 45577889999998664
No 160
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=98.50 E-value=2.7e-06 Score=38.92 Aligned_cols=56 Identities=14% Similarity=0.163 Sum_probs=40.0
Q ss_pred ceEEEEECCCCCEEE-EecCCCcEEEEECCC----CceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 7 YGLHCVFSPDCRLLA-TTSADQTARIWNTED----FSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 7 ~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
.+..+.|+|+++.++ +...++.+.+|++.. ...+..+.. + ..+..++|+|++++++
T Consensus 232 ~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~-~-~~~~~~~~s~dg~~l~ 292 (343)
T 1ri6_A 232 WAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPT-E-TQPRGFNVDHSGKYLI 292 (343)
T ss_dssp CEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEEC-S-SSCCCEEECTTSSEEE
T ss_pred CccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecC-C-CccceEEECCCCCEEE
Confidence 455789999998665 555789999999982 233333443 3 3388999999998765
No 161
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=98.50 E-value=2.6e-06 Score=39.09 Aligned_cols=54 Identities=13% Similarity=0.098 Sum_probs=42.8
Q ss_pred ceEEEEECC-CCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 7 YGLHCVFSP-DCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 7 ~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
.+..+.++| +++.++.+ ++.+.+|++.+++.+..+.. ...+..++|+|+++.++
T Consensus 256 ~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~ 310 (349)
T 1jmx_B 256 LYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANL--DHTYYCVAFDKKGDKLY 310 (349)
T ss_dssp CEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEEC--SSCCCEEEECSSSSCEE
T ss_pred cceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcC--CCCccceEECCCCCEEE
Confidence 456778899 99887776 78999999998887766654 34577899999988765
No 162
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=98.49 E-value=3.8e-06 Score=39.06 Aligned_cols=58 Identities=19% Similarity=0.221 Sum_probs=40.8
Q ss_pred ceEEEEECCCCCEEEEec-CCCcEEEEECCCCce--EEEeec--cCCCcEeEEEEccCCcEEe
Q psy7061 7 YGLHCVFSPDCRLLATTS-ADQTARIWNTEDFSL--VRELGT--ANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 7 ~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~--~~~~~~--~~~~~v~~~~~~~~~~~i~ 64 (65)
.+..+.|+|+++.++... .++.+.+|++.++.. +..... .+......++|+|++++++
T Consensus 212 ~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~ 274 (361)
T 3scy_A 212 GPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLY 274 (361)
T ss_dssp CEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEE
T ss_pred CCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEE
Confidence 466789999998765555 688999999886543 222221 1235568999999999874
No 163
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.46 E-value=2.9e-06 Score=39.94 Aligned_cols=52 Identities=12% Similarity=0.163 Sum_probs=43.7
Q ss_pred eEEEEECCCCCEEEEecCCCcEEEEECCCC--ceEEEeeccCCCcEeEEEEccCCc
Q psy7061 8 GLHCVFSPDCRLLATTSADQTARIWNTEDF--SLVRELGTANQRWVWDAAFTLDSK 61 (65)
Q Consensus 8 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~ 61 (65)
+..+.|+|+++.+.+++. +.+.+|+..++ +.+..+.. .......++++|+|.
T Consensus 307 p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~~~~~i~~-~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 307 ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEPKLLRTIEG-AAEASLQVQFHPVGG 360 (361)
T ss_dssp CCEEEEETTTTEEEEECS-SCEEEEECSSSSCEEEEEETT-SCSSEEEEEECCCSC
T ss_pred eeEEEECCCCCEEEEeCC-CeEEEEECCCCcceeeEEecc-CCCCcEEEEecCCCC
Confidence 667899999998877776 99999999999 88877655 567778899999986
No 164
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=98.46 E-value=4.6e-07 Score=45.41 Aligned_cols=54 Identities=17% Similarity=0.148 Sum_probs=41.6
Q ss_pred EEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCC---cEeEEEEccCCcEEe
Q psy7061 9 LHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQR---WVWDAAFTLDSKFLL 64 (65)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~i~ 64 (65)
..+.|+|+++.+. .+.++.+++|++.++.....+.. +.. .+..++|+|+|++|+
T Consensus 19 ~~~~~s~dg~~~~-~~~d~~i~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~SpDg~~la 75 (719)
T 1z68_A 19 FFPNWISGQEYLH-QSADNNIVLYNIETGQSYTILSN-RTMKSVNASNYGLSPDRQFVY 75 (719)
T ss_dssp CCCEESSSSEEEE-ECTTSCEEEEESSSCCEEEEECH-HHHHTTTCSEEEECTTSSEEE
T ss_pred CccEECCCCeEEE-EcCCCCEEEEEcCCCcEEEEEcc-ccccccceeeEEECCCCCeEE
Confidence 3678999996444 45689999999998887666554 332 489999999999886
No 165
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=98.42 E-value=5.1e-06 Score=38.25 Aligned_cols=58 Identities=12% Similarity=0.128 Sum_probs=45.7
Q ss_pred ceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeec---cCCCcEeEEEEccCCcEEe
Q psy7061 7 YGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGT---ANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 7 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~i~ 64 (65)
.+..+.|+|+++.++.+..++.+.+|+..+++....+.. .+...+..++|+|+++.++
T Consensus 186 ~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~ 246 (353)
T 3vgz_A 186 MSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAF 246 (353)
T ss_dssp TCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEE
T ss_pred ccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEE
Confidence 466788999999888888899999999998887766553 1345677899999998664
No 166
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=98.40 E-value=1.2e-05 Score=37.64 Aligned_cols=59 Identities=10% Similarity=0.001 Sum_probs=42.3
Q ss_pred cceEEEEECCCCCEEEEec-CCCcEEEEECC-CCceE--EEeecc-CCCcEeEEEEccCCcEEe
Q psy7061 6 AYGLHCVFSPDCRLLATTS-ADQTARIWNTE-DFSLV--RELGTA-NQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 6 ~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~--~~~~~~-~~~~v~~~~~~~~~~~i~ 64 (65)
..+..+.|+|+++.++++. .+..+++|+++ +++.. ...... +......++|+|++++++
T Consensus 145 ~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~ 208 (365)
T 1jof_A 145 TGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLY 208 (365)
T ss_dssp CCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEE
T ss_pred CcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEE
Confidence 4577899999998776654 46789999998 56542 223211 256789999999998764
No 167
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=98.38 E-value=1.5e-06 Score=42.90 Aligned_cols=51 Identities=12% Similarity=0.154 Sum_probs=42.7
Q ss_pred ECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEeC
Q psy7061 13 FSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~s 65 (65)
++|++..+++...++.+.+|+..+++.+..+.. +.. ++.++|+|+++++++
T Consensus 145 ~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~-g~~-~~~v~~spdg~~l~v 195 (543)
T 1nir_A 145 LDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDT-GYA-VHISRMSASGRYLLV 195 (543)
T ss_dssp CCGGGEEEEEEGGGTEEEEEETTTCCEEEEEEC-STT-EEEEEECTTSCEEEE
T ss_pred cCCCCEEEEEEcCCCeEEEEECCCceEEEEEec-Ccc-cceEEECCCCCEEEE
Confidence 677788888888999999999999998888874 222 889999999998863
No 168
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=98.38 E-value=1.1e-05 Score=37.12 Aligned_cols=54 Identities=19% Similarity=0.284 Sum_probs=42.7
Q ss_pred EEEEECCCCCEE-EEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 9 LHCVFSPDCRLL-ATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 9 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
..+.|+|+++.+ ++...++.+.+|+..+++.+..+.. ......++|+|++++++
T Consensus 275 ~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~ 329 (353)
T 3vgz_A 275 LAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDT--PTHPNSLALSADGKTLY 329 (353)
T ss_dssp CCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEEC--CSEEEEEEECTTSCEEE
T ss_pred ceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEec--CCCCCeEEEcCCCCEEE
Confidence 457889998854 5555789999999998888777764 45789999999998654
No 169
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=98.37 E-value=1.4e-05 Score=36.96 Aligned_cols=58 Identities=16% Similarity=0.122 Sum_probs=40.6
Q ss_pred ceEEEEECCCCCEEEEecCCCcEEEEECC-CCceEE--EeeccCCCcEeEEEEccCCcEEe
Q psy7061 7 YGLHCVFSPDCRLLATTSADQTARIWNTE-DFSLVR--ELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 7 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
.+..+.|+|+++.+++...++.+.+|++. ++.... ............++|+|++++++
T Consensus 142 ~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~ 202 (347)
T 3hfq_A 142 HIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAF 202 (347)
T ss_dssp CEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEE
T ss_pred CceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEE
Confidence 46679999999966666678889999998 443322 12221334678899999998654
No 170
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=98.32 E-value=1.8e-06 Score=43.77 Aligned_cols=56 Identities=16% Similarity=0.108 Sum_probs=42.9
Q ss_pred cceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCC-----cEeEEEEccCCcEEe
Q psy7061 6 AYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQR-----WVWDAAFTLDSKFLL 64 (65)
Q Consensus 6 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~i~ 64 (65)
.....+.|+|+++.++++ ++.+++|++.++.....+.. +.. ....++|||++++|+
T Consensus 17 ~~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~Spdg~~l~ 77 (740)
T 4a5s_A 17 LKLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLEN-STFDEFGHSINDYSISPDGQFIL 77 (740)
T ss_dssp CCCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECT-TTTTTCCSCCCEEEECTTSSEEE
T ss_pred ccccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEec-hhhhhhcccccceEECCCCCEEE
Confidence 346688999999877775 89999999998887666665 332 224478999999876
No 171
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=98.31 E-value=1.8e-05 Score=36.99 Aligned_cols=56 Identities=14% Similarity=0.065 Sum_probs=40.7
Q ss_pred eEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEE--EEccCCcEEe
Q psy7061 8 GLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDA--AFTLDSKFLL 64 (65)
Q Consensus 8 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~~~i~ 64 (65)
+....|+|+++.++....+..+++|++.+++....... +...+... .++|+++.++
T Consensus 83 ~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~-~~~~~~~~~~~~~~dg~~l~ 140 (388)
T 3pe7_A 83 TFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQV-PAEWVGYGTWVANSDCTKLV 140 (388)
T ss_dssp SSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEEC-CTTEEEEEEEEECTTSSEEE
T ss_pred ccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeec-hhhcccccceeECCCCCeec
Confidence 34568999999999988888999999998877655554 44444333 3478887764
No 172
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=98.28 E-value=5.5e-06 Score=38.03 Aligned_cols=54 Identities=6% Similarity=-0.012 Sum_probs=41.5
Q ss_pred EEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 11 CVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
+.+.+++..++++..++.+++|+..+++.+..+..+.......++|+|+++.++
T Consensus 5 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~ 58 (349)
T 1jmx_B 5 PALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAY 58 (349)
T ss_dssp CCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEE
T ss_pred ccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEE
Confidence 345677778888899999999999988887776641222578899999998653
No 173
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=98.25 E-value=1.1e-05 Score=38.83 Aligned_cols=57 Identities=11% Similarity=0.004 Sum_probs=43.6
Q ss_pred cceEEEEECCCCCEEEEecCCCcEEEEECCCCce--EEEe------ec--cCCCcEeEEEEccCCcEEe
Q psy7061 6 AYGLHCVFSPDCRLLATTSADQTARIWNTEDFSL--VREL------GT--ANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 6 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~------~~--~~~~~v~~~~~~~~~~~i~ 64 (65)
..|.+++|+|+| ++.+..++.++.|..+.... ...+ .. .+...|.+++|.+++.+++
T Consensus 163 ~~Vs~v~WSpkG--~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv 229 (388)
T 1xip_A 163 QNVTSFDVTNSQ--LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLA 229 (388)
T ss_dssp ESEEEEEECSSE--EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEE
T ss_pred CCceEEEEcCCc--eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEE
Confidence 468999999998 56678899999998776553 3344 11 1568899999999988876
No 174
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=98.24 E-value=1.6e-05 Score=40.17 Aligned_cols=55 Identities=15% Similarity=0.151 Sum_probs=40.9
Q ss_pred EEEEECCCCCEEEEecCCCc-------------EEEEECCCCc----eEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 9 LHCVFSPDCRLLATTSADQT-------------ARIWNTEDFS----LVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~----~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
..+.|+|+++.++.++.+.. +++|++.++. .+..... +...+..+.|+|+|++|+
T Consensus 171 ~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~-~~~~~~~~~~SpDG~~l~ 242 (695)
T 2bkl_A 171 ATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTG-DPTTFLQSDLSRDGKYLF 242 (695)
T ss_dssp CCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCC-CTTCEEEEEECTTSCCEE
T ss_pred cceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCC-CCEEEEEEEECCCCCEEE
Confidence 57899999998888877654 9999998665 2222222 446788999999998875
No 175
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=98.23 E-value=2.2e-05 Score=39.75 Aligned_cols=57 Identities=11% Similarity=0.059 Sum_probs=40.3
Q ss_pred eEEEEECCCCCEEEEecCCCc----------------EEEEECCCCce--EEEeec-cCCCcEeEEEEccCCcEEe
Q psy7061 8 GLHCVFSPDCRLLATTSADQT----------------ARIWNTEDFSL--VRELGT-ANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 8 v~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~--~~~~~~-~~~~~v~~~~~~~~~~~i~ 64 (65)
+..+.|+|+++.++.+..+.. +++|++.++.. ...... .+...+..+.|+|++++|+
T Consensus 173 ~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~ 248 (710)
T 2xdw_A 173 FSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVL 248 (710)
T ss_dssp SCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEE
T ss_pred cceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEE
Confidence 456899999998887776554 99999886552 122222 1345578899999999876
No 176
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=98.22 E-value=1.7e-05 Score=36.06 Aligned_cols=56 Identities=5% Similarity=0.121 Sum_probs=44.3
Q ss_pred cceEEEEECCCCC-EEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 6 AYGLHCVFSPDCR-LLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 6 ~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
.....+.|+|+++ .+.+...++.+..|+...+ ...+.. +...+..++++|+++.++
T Consensus 28 ~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~-~~~~~~~l~~~~dg~l~v 84 (296)
T 3e5z_A 28 TWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMH-PSHHQNGHCLNKQGHLIA 84 (296)
T ss_dssp SSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEES-SCSSEEEEEECTTCCEEE
T ss_pred ccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEEC-CCCCcceeeECCCCcEEE
Confidence 4567889999988 6777778889999998876 455555 567789999999998765
No 177
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=98.18 E-value=5e-05 Score=35.22 Aligned_cols=60 Identities=8% Similarity=0.098 Sum_probs=45.8
Q ss_pred ccceEEEEECCCCCEEEEecCC------------------------CcEEEEECCCCceEEEeeccCCCcEeEEEEccCC
Q psy7061 5 RAYGLHCVFSPDCRLLATTSAD------------------------QTARIWNTEDFSLVRELGTANQRWVWDAAFTLDS 60 (65)
Q Consensus 5 ~~~v~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 60 (65)
.+.+..++++++++.+++...+ +.+.+|+..+++........+-.....++++|++
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g 102 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDG 102 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTS
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCC
Confidence 3568899999999988777666 3689999888887665553234578899999999
Q ss_pred cEEe
Q psy7061 61 KFLL 64 (65)
Q Consensus 61 ~~i~ 64 (65)
+.++
T Consensus 103 ~l~v 106 (329)
T 3fvz_A 103 NYWV 106 (329)
T ss_dssp CEEE
T ss_pred CEEE
Confidence 8765
No 178
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.15 E-value=2.3e-05 Score=36.97 Aligned_cols=51 Identities=6% Similarity=0.029 Sum_probs=39.2
Q ss_pred EEECCCCCEEEEecC-----------CCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 11 CVFSPDCRLLATTSA-----------DQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 11 ~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
+.+++++..+..... ...+.+||+.+.+.+..+.. +. ...++|+|++++++
T Consensus 259 ~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~-~~--p~~ia~spdg~~l~ 320 (361)
T 2oiz_A 259 VGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPG-RD--ALSMTIDQQRNLML 320 (361)
T ss_dssp EEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEEC-TT--CCEEEEETTTTEEE
T ss_pred EEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEec-CC--eeEEEECCCCCEEE
Confidence 567888765544321 34799999999999888876 44 99999999999875
No 179
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=98.12 E-value=1.4e-05 Score=37.51 Aligned_cols=57 Identities=9% Similarity=0.037 Sum_probs=38.4
Q ss_pred ceEEEE-ECCCCCEEEEecCC-C-----cEEEEECC-CCceEEE---eeccCCCcEeEEEEcc---CCcEEe
Q psy7061 7 YGLHCV-FSPDCRLLATTSAD-Q-----TARIWNTE-DFSLVRE---LGTANQRWVWDAAFTL---DSKFLL 64 (65)
Q Consensus 7 ~v~~~~-~~~~~~~~~~~~~~-~-----~~~~~~~~-~~~~~~~---~~~~~~~~v~~~~~~~---~~~~i~ 64 (65)
.+..+. |+|+++.+.++..+ . .+.+|+++ ++..... ... +......++|+| ++++++
T Consensus 255 ~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~-~~~~~~~~a~sp~~~dg~~l~ 325 (365)
T 1jof_A 255 YRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPT-PTSGGHSNAVSPCPWSDEWMA 325 (365)
T ss_dssp EEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEEC-SSCCTTCCCEEECTTCTTEEE
T ss_pred ccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeec-CCCCcccceecCCCcCCCEEE
Confidence 477889 99999977655532 2 79999986 4554321 222 344566788899 788775
No 180
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.12 E-value=2.7e-06 Score=39.70 Aligned_cols=56 Identities=13% Similarity=0.070 Sum_probs=36.7
Q ss_pred eEEEEECCCCCEEEEecCC---CcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 8 GLHCVFSPDCRLLATTSAD---QTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 8 v~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
+..+.|+|+|+.++..... ..++++++..++....... .......+.|+|+++.|+
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~-~~~~~~~~~~spdg~~l~ 96 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEG-KGDNTFGGFISTDERAFF 96 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCS-SCBCTTTCEECTTSSEEE
T ss_pred eecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecC-CCCccccceECCCCCEEE
Confidence 5667899999987665432 3678888887765433332 222233378999999875
No 181
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=98.07 E-value=1e-05 Score=41.13 Aligned_cols=55 Identities=22% Similarity=0.029 Sum_probs=38.3
Q ss_pred ceEEEEECCCCCEEEEecCC-----CcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 7 YGLHCVFSPDCRLLATTSAD-----QTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 7 ~v~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
.+..+.|+|+|+.++.+..+ ..+++|++.+++.+.... ....+..++|+|+ +.++
T Consensus 164 ~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~--~~~~~~~~~wspD-~~l~ 223 (741)
T 1yr2_A 164 ALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADEL--KWVKFSGLAWLGN-DALL 223 (741)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEE--EEEESCCCEESTT-SEEE
T ss_pred EEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccC--CCceeccEEEECC-CEEE
Confidence 56778999999987665432 359999999887654322 1222357889999 7664
No 182
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=98.04 E-value=3.1e-05 Score=35.76 Aligned_cols=53 Identities=17% Similarity=0.181 Sum_probs=37.9
Q ss_pred eEEEEECCCCCEEEEecC---------------------------CCcEEEEECCCCceEEEeeccCCCcEeEEEEccCC
Q psy7061 8 GLHCVFSPDCRLLATTSA---------------------------DQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDS 60 (65)
Q Consensus 8 v~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 60 (65)
+..+.|+|+++.++..+. ...+++|++.++..+..+.. . .+..++|+|++
T Consensus 106 ~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~--~~~~~~~spdg 182 (347)
T 2gop_A 106 IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P--RFSSGIWHRDK 182 (347)
T ss_dssp EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E--TTCEEEEETTE
T ss_pred ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C--CcccccCCCCe
Confidence 678899999988766652 24688888887766344443 2 67888999998
Q ss_pred cEEe
Q psy7061 61 KFLL 64 (65)
Q Consensus 61 ~~i~ 64 (65)
.++
T Consensus 183 -~~~ 185 (347)
T 2gop_A 183 -IVV 185 (347)
T ss_dssp -EEE
T ss_pred -EEE
Confidence 543
No 183
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.00 E-value=0.00021 Score=35.97 Aligned_cols=56 Identities=13% Similarity=0.060 Sum_probs=44.3
Q ss_pred ceEEEEECCCCCEEEEecCCCcEEEEECC--CCceEEEeeccCCCcEeEEEEc----cCCcEEe
Q psy7061 7 YGLHCVFSPDCRLLATTSADQTARIWNTE--DFSLVRELGTANQRWVWDAAFT----LDSKFLL 64 (65)
Q Consensus 7 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~v~~~~~~----~~~~~i~ 64 (65)
.+..+.++|+++++..++.++.+.++|+. +.+.+..+.. ......++++ |++++++
T Consensus 198 ~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~--G~~P~~ia~s~~~~pDGk~l~ 259 (567)
T 1qks_A 198 AVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKI--GSEARSIETSKMEGWEDKYAI 259 (567)
T ss_dssp CEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEEC--CSEEEEEEECCSTTCTTTEEE
T ss_pred CccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEec--CCCCceeEEccccCCCCCEEE
Confidence 34578899999998888889999999995 6677666654 3456789999 6998875
No 184
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.00 E-value=0.00013 Score=33.41 Aligned_cols=56 Identities=4% Similarity=-0.104 Sum_probs=44.4
Q ss_pred ceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEc-cCCcEE
Q psy7061 7 YGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFT-LDSKFL 63 (65)
Q Consensus 7 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~i 63 (65)
....+.+.++++..++....+.|..|+.++++.+..+.. +...+.+++|. |+++.+
T Consensus 200 ~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~-p~~~~t~~~f~g~d~~~L 256 (297)
T 3g4e_A 200 IPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKL-PVDKTTSCCFGGKNYSEM 256 (297)
T ss_dssp EEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEEC-SSSBEEEEEEESGGGCEE
T ss_pred CCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEEC-CCCCceEEEEeCCCCCEE
Confidence 456678888888777777778899999988888877776 55778999998 776654
No 185
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=97.94 E-value=0.00012 Score=33.53 Aligned_cols=48 Identities=21% Similarity=0.097 Sum_probs=39.8
Q ss_pred CCCEEEEecCCCcEEEEECCCCceEEEeeccCC-CcEeEEEEccCCcEEe
Q psy7061 16 DCRLLATTSADQTARIWNTEDFSLVRELGTANQ-RWVWDAAFTLDSKFLL 64 (65)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~i~ 64 (65)
.++.+++++.++.+++|+..+++.+-.+.. +. ..++++.+.|+++.++
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~-~~~~~~~~~~~~pdG~ilv 52 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPL-EKGWECNSVAATKAGEILF 52 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEEC-CTTCCCCEEEECTTSCEEE
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCC-CccCCCcCeEECCCCCEEE
Confidence 357888899999999999989998877776 43 4788899999998876
No 186
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=97.89 E-value=0.00022 Score=32.49 Aligned_cols=57 Identities=11% Similarity=0.031 Sum_probs=43.1
Q ss_pred cceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEE
Q psy7061 6 AYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFL 63 (65)
Q Consensus 6 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i 63 (65)
..+..+.++++++.+++...++.+..|+.++++.+..+.. +...+..++++|+++.+
T Consensus 226 ~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~-~~~~~~~i~~~~dg~~l 282 (314)
T 1pjx_A 226 GGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRC-PFEKPSNLHFKPQTKTI 282 (314)
T ss_dssp CEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEEC-SSSCEEEEEECTTSSEE
T ss_pred CCCCceEECCCCCEEEEEcCCCEEEEEcCCCCcEeEEEeC-CCCCceeEEECCCCCEE
Confidence 3456678888888777776778899999886666555555 55778999999998843
No 187
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=97.86 E-value=4.1e-05 Score=38.90 Aligned_cols=58 Identities=12% Similarity=-0.001 Sum_probs=38.0
Q ss_pred cccceEEEEECCCCCEEEEec-----CCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 4 HRAYGLHCVFSPDCRLLATTS-----ADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 4 ~~~~v~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
+...+..+.|+|++++++.+. ....++++++.+++.+..... ......++|+ +++.|+
T Consensus 127 ~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~--~~k~~~~~Ws-Dg~~l~ 189 (693)
T 3iuj_A 127 GTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLK--DVKFSGISWL-GNEGFF 189 (693)
T ss_dssp SCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEE--EEESCCCEEE-TTTEEE
T ss_pred CcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccC--CceeccEEEe-CCCEEE
Confidence 334577889999999876422 234689999998876543221 1123567888 887664
No 188
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=97.85 E-value=0.00027 Score=32.18 Aligned_cols=60 Identities=7% Similarity=-0.064 Sum_probs=42.4
Q ss_pred ccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeec---cCCCcEeEEEEccCCcEEe
Q psy7061 5 RAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGT---ANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 5 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~i~ 64 (65)
...+..+.++++++.+++...++.+.+|+..+++....... .....+..++++|+++.++
T Consensus 68 ~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v 130 (296)
T 3e5z_A 68 SHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWF 130 (296)
T ss_dssp CSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEE
T ss_pred CCCcceeeECCCCcEEEEecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEE
Confidence 34577889999999887777778899999877665433221 1123456788999998776
No 189
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=97.83 E-value=0.00029 Score=31.87 Aligned_cols=59 Identities=15% Similarity=0.291 Sum_probs=42.6
Q ss_pred cceEEEEECCCCCEEEEecCCC-cEEEEECCCCceEEEeecc-CCCcEeEEEEccCCcEEeC
Q psy7061 6 AYGLHCVFSPDCRLLATTSADQ-TARIWNTEDFSLVRELGTA-NQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 6 ~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~i~s 65 (65)
..+..+.++++++.+++...++ .+.+|+.. ++.+..+... ....+..++++|+++.+++
T Consensus 207 ~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs 267 (286)
T 1q7f_A 207 NYPIGVGINSNGEILIADNHNNFNLTIFTQD-GQLISALESKVKHAQCFDVALMDDGSVVLA 267 (286)
T ss_dssp CSEEEEEECTTCCEEEEECSSSCEEEEECTT-SCEEEEEEESSCCSCEEEEEEETTTEEEEE
T ss_pred CCCcEEEECCCCCEEEEeCCCCEEEEEECCC-CCEEEEEcccCCCCcceeEEECCCCcEEEE
Confidence 4577899999998887777665 99999954 5555555441 2234778999999987653
No 190
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.80 E-value=0.00017 Score=33.77 Aligned_cols=54 Identities=15% Similarity=0.049 Sum_probs=35.5
Q ss_pred ceEEEEECCCCCEEEEecCC-----CcEEEEECCCCceEEEeeccCCCcEeEEEEcc-CCcEEe
Q psy7061 7 YGLHCVFSPDCRLLATTSAD-----QTARIWNTEDFSLVRELGTANQRWVWDAAFTL-DSKFLL 64 (65)
Q Consensus 7 ~v~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~i~ 64 (65)
.+..+.|+|+++.++..+.+ ..+++|++.++........ . . .. ..|+| +++.++
T Consensus 239 ~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~-~-~-~~-~~~s~~dg~~l~ 298 (396)
T 3c5m_A 239 SCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVM-P-P-CS-HLMSNFDGSLMV 298 (396)
T ss_dssp EEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEEC-C-S-EE-EEEECSSSSEEE
T ss_pred cccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeC-C-C-CC-CCccCCCCceEE
Confidence 46678999999876555432 3399999887765433322 1 1 23 88999 988765
No 191
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=97.71 E-value=0.00049 Score=31.11 Aligned_cols=58 Identities=10% Similarity=0.256 Sum_probs=42.7
Q ss_pred cceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeec-cCCCcEeEEEEccCCcEEe
Q psy7061 6 AYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGT-ANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 6 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~i~ 64 (65)
..+..+.++++++.+++...++.+++|+.. +..+..+.. .+......++++++++.++
T Consensus 164 ~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~g~~~~p~~i~~d~~G~l~v 222 (286)
T 1q7f_A 164 EFPNGVVVNDKQEIFISDNRAHCVKVFNYE-GQYLRQIGGEGITNYPIGVGINSNGEILI 222 (286)
T ss_dssp SSEEEEEECSSSEEEEEEGGGTEEEEEETT-CCEEEEESCTTTSCSEEEEEECTTCCEEE
T ss_pred CCcEEEEECCCCCEEEEECCCCEEEEEcCC-CCEEEEEccCCccCCCcEEEECCCCCEEE
Confidence 457789999998877777778899999974 445545543 1235678899999988765
No 192
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=97.70 E-value=0.00067 Score=32.41 Aligned_cols=55 Identities=16% Similarity=0.198 Sum_probs=39.1
Q ss_pred EEEECCCCCEEEEec----------CCCcEEEEECCCCceEEEeecc--C----CCcEeEEEEccCCcEEe
Q psy7061 10 HCVFSPDCRLLATTS----------ADQTARIWNTEDFSLVRELGTA--N----QRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 10 ~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~--~----~~~v~~~~~~~~~~~i~ 64 (65)
.+.++|+++.+..+. .++.+.+++..+.+.+..+... . ...-..++++|++++++
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~ 140 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLL 140 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEE
Confidence 788999998876664 2567899999877766655431 0 12345789999999875
No 193
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=97.69 E-value=0.00077 Score=32.67 Aligned_cols=51 Identities=8% Similarity=-0.156 Sum_probs=37.2
Q ss_pred ccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcE
Q psy7061 5 RAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKF 62 (65)
Q Consensus 5 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 62 (65)
...+..+.+.+. .++.+..++.+.+|++..+.... ....|.+++|+|+|..
T Consensus 126 ~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~-----~~~~Vs~v~WSpkG~~ 176 (388)
T 1xip_A 126 EKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ-----LAQNVTSFDVTNSQLA 176 (388)
T ss_dssp SSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE-----EEESEEEEEECSSEEE
T ss_pred ecceeeEEecCC--CEEEEECCCCEEEEEccCCcccc-----ccCCceEEEEcCCceE
Confidence 344666666543 37778899999999998766532 2357999999999843
No 194
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=97.65 E-value=0.00068 Score=31.26 Aligned_cols=59 Identities=15% Similarity=0.071 Sum_probs=41.7
Q ss_pred cceEEEEECCCCCEEEEecCC----CcEEEEECCCCceEEEeec-cCCCcEeEEEEccCCcEEe
Q psy7061 6 AYGLHCVFSPDCRLLATTSAD----QTARIWNTEDFSLVRELGT-ANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 6 ~~v~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~i~ 64 (65)
..+..+.++++++.+++...+ +.+..|+...+.....+.. .....+..++++|+++.++
T Consensus 87 ~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v 150 (333)
T 2dg1_A 87 ANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYF 150 (333)
T ss_dssp SSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEE
T ss_pred CCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEE
Confidence 457889999999877766655 5788998876654423221 1345688999999987765
No 195
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=97.56 E-value=0.0011 Score=30.95 Aligned_cols=57 Identities=11% Similarity=0.138 Sum_probs=40.4
Q ss_pred eEEEEECCCCCEEEEecCC----------CcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 8 GLHCVFSPDCRLLATTSAD----------QTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 8 v~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
...+.++++++.+++...+ +.+.+++..+++....+..........++++|+++.+.
T Consensus 174 p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~ly 240 (328)
T 3dsm_A 174 PTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLY 240 (328)
T ss_dssp BCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEE
T ss_pred ccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEE
Confidence 3456778888876666554 67999999888766555431234688999999887664
No 196
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=97.54 E-value=0.00092 Score=29.88 Aligned_cols=58 Identities=7% Similarity=-0.137 Sum_probs=41.7
Q ss_pred cceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 6 AYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 6 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
..+..+.+++++..+++...++.+..|+............ +...+..++++++++.++
T Consensus 192 ~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~-~~~~p~~i~~~~~g~l~v 249 (270)
T 1rwi_B 192 TAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFT-GLNTPLAVAVDSDRTVYV 249 (270)
T ss_dssp CSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCCC-SCSCEEEEEECTTCCEEE
T ss_pred CCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeeccC-CCCCceeEEECCCCCEEE
Confidence 4567889999888777777788899999875443322222 335688999999988665
No 197
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=97.50 E-value=0.00024 Score=34.07 Aligned_cols=55 Identities=15% Similarity=0.080 Sum_probs=40.7
Q ss_pred EEEECCCCCEEEEec----------CCCcEEEEECCCCceEEEeecc--C----CCcEeEEEEccCCcEEe
Q psy7061 10 HCVFSPDCRLLATTS----------ADQTARIWNTEDFSLVRELGTA--N----QRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 10 ~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~--~----~~~v~~~~~~~~~~~i~ 64 (65)
.+.++|+++.+..+. .++.+.++|+.+.+.+..+.-+ . ......++++|++++++
T Consensus 69 ~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~ly 139 (368)
T 1mda_H 69 LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLL 139 (368)
T ss_dssp EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEE
T ss_pred ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCCCEEE
Confidence 688999998765554 3578999999999888887541 0 13456788899998765
No 198
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=97.47 E-value=0.0015 Score=30.41 Aligned_cols=58 Identities=7% Similarity=0.096 Sum_probs=40.5
Q ss_pred cceEEEEECC-CCCEEEEec-CCCcEEEEECCCCceEEEeecc---------CCCcEeEEEEccC-CcEEe
Q psy7061 6 AYGLHCVFSP-DCRLLATTS-ADQTARIWNTEDFSLVRELGTA---------NQRWVWDAAFTLD-SKFLL 64 (65)
Q Consensus 6 ~~v~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~---------~~~~v~~~~~~~~-~~~i~ 64 (65)
.....+.++| ++..+++.+ .++.+++|+ .++..+..+... .-.....++++|+ +..++
T Consensus 143 ~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v 212 (329)
T 3fvz_A 143 CQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCV 212 (329)
T ss_dssp SSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEE
T ss_pred CCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEE
Confidence 3578899999 788877775 688999999 456665555420 1133788999998 66554
No 199
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=97.43 E-value=0.0026 Score=32.83 Aligned_cols=55 Identities=9% Similarity=0.033 Sum_probs=36.5
Q ss_pred EEEEECCCCCEEEEecCCC--------------cEEEEECCCCce--EEEeec-cCCCcEeEEEEccCCcEEe
Q psy7061 9 LHCVFSPDCRLLATTSADQ--------------TARIWNTEDFSL--VRELGT-ANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~--~~~~~~-~~~~~v~~~~~~~~~~~i~ 64 (65)
..+.|+|+ +.++.+..+. .+++|++.++.. ...+.. .+...+..+.|+|+|++|+
T Consensus 212 ~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~ 283 (741)
T 1yr2_A 212 SGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVV 283 (741)
T ss_dssp CCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEE
T ss_pred ccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEE
Confidence 46789999 8877766543 388888865542 222222 1223588999999998875
No 200
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=97.34 E-value=0.0019 Score=28.83 Aligned_cols=57 Identities=11% Similarity=-0.010 Sum_probs=40.1
Q ss_pred ceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 7 YGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 7 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
.+..+.++++++.+++...++.+..|+............ .......+++++++..++
T Consensus 151 ~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~-~~~~p~~i~~d~~g~l~v 207 (270)
T 1rwi_B 151 DPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFT-DITAPWGIAVDEAGTVYV 207 (270)
T ss_dssp SCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCS-SCCSEEEEEECTTCCEEE
T ss_pred CceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeeccc-CCCCceEEEECCCCCEEE
Confidence 456788899888777776778899999876554333222 335678889998886654
No 201
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=97.30 E-value=0.0028 Score=29.76 Aligned_cols=57 Identities=11% Similarity=0.080 Sum_probs=40.6
Q ss_pred eEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 8 GLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 8 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
...+.+++++..+++...++.|..|+..+++.........-.....+++.++++.++
T Consensus 250 pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g~l~v 306 (343)
T 2qe8_A 250 CDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTDEKLSWTDSFNFGSDGYLYF 306 (343)
T ss_dssp CSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEECGGGSCEEEEEECTTSCEEE
T ss_pred CceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEECCceecCCeeEECCCCcEEE
Confidence 446788899998888888899999998455533222221235678999999887765
No 202
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=97.28 E-value=0.00074 Score=32.73 Aligned_cols=55 Identities=18% Similarity=0.325 Sum_probs=39.2
Q ss_pred EEEECCCCCEEEEec----------CCCcEEEEECCCCceEEEeeccC------CCcEeEEEEccCCcEEe
Q psy7061 10 HCVFSPDCRLLATTS----------ADQTARIWNTEDFSLVRELGTAN------QRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 10 ~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~i~ 64 (65)
.+.++|+++.+..++ .++.+.+||..+.+.+..+.-.. ...-..++++|+++++.
T Consensus 82 ~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~ly 152 (386)
T 3sjl_D 82 NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLL 152 (386)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEE
T ss_pred cEEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEE
Confidence 488999998765544 35679999999988877765311 12456788999998764
No 203
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=97.22 E-value=0.003 Score=28.79 Aligned_cols=58 Identities=5% Similarity=-0.114 Sum_probs=39.2
Q ss_pred ceEEEEECCCCCEEEE-------ecCCCcEEEEECCCCceEEEee---ccCCCcEeEEEEccC-CcEEe
Q psy7061 7 YGLHCVFSPDCRLLAT-------TSADQTARIWNTEDFSLVRELG---TANQRWVWDAAFTLD-SKFLL 64 (65)
Q Consensus 7 ~v~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~---~~~~~~v~~~~~~~~-~~~i~ 64 (65)
....+.|++++..+++ ...++.+..|+..+++...... ..+...+..++++++ ++.++
T Consensus 19 ~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v 87 (314)
T 1pjx_A 19 GAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFV 87 (314)
T ss_dssp TCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEE
T ss_pred CccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEE
Confidence 4567889988887776 4567889999977665432222 002356788999998 77554
No 204
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=97.20 E-value=0.0033 Score=28.83 Aligned_cols=55 Identities=11% Similarity=0.010 Sum_probs=39.8
Q ss_pred ceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 7 YGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 7 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
.+..+.+.|+++.+++ .+..+..++. +++.+-.+.......+..+.+.++++.++
T Consensus 38 ~~~~~~~~pdG~ilvs--~~~~V~~~d~-~G~~~W~~~~~~~~~~~~~~~~~dG~~lv 92 (276)
T 3no2_A 38 ECNSVAATKAGEILFS--YSKGAKMITR-DGRELWNIAAPAGCEMQTARILPDGNALV 92 (276)
T ss_dssp CCCEEEECTTSCEEEE--CBSEEEEECT-TSCEEEEEECCTTCEEEEEEECTTSCEEE
T ss_pred CCcCeEECCCCCEEEe--CCCCEEEECC-CCCEEEEEcCCCCccccccEECCCCCEEE
Confidence 4567788999998773 4667888898 67777776652235677778888887765
No 205
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=97.19 E-value=0.0036 Score=28.83 Aligned_cols=55 Identities=11% Similarity=0.097 Sum_probs=39.4
Q ss_pred ceEEEEECCCCC-EEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 7 YGLHCVFSPDCR-LLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 7 ~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
......|+++++ .+.+...++.+..|+.. +. ...+.. ....+..++++++++.++
T Consensus 46 ~~egp~~~~~g~~l~~~d~~~~~i~~~~~~-g~-~~~~~~-~~~~~~gl~~d~dG~l~v 101 (305)
T 3dr2_A 46 WSEGPAWWEAQRTLVWSDLVGRRVLGWRED-GT-VDVLLD-ATAFTNGNAVDAQQRLVH 101 (305)
T ss_dssp SEEEEEEEGGGTEEEEEETTTTEEEEEETT-SC-EEEEEE-SCSCEEEEEECTTSCEEE
T ss_pred CccCCeEeCCCCEEEEEECCCCEEEEEeCC-CC-EEEEeC-CCCccceeeECCCCCEEE
Confidence 456788999887 55666678889999874 44 334444 456788899999988765
No 206
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=97.17 E-value=0.00087 Score=32.84 Aligned_cols=55 Identities=24% Similarity=0.370 Sum_probs=39.2
Q ss_pred EEEECCCCCEEEEec----------CCCcEEEEECCCCceEEEeecc--C----CCcEeEEEEccCCcEEe
Q psy7061 10 HCVFSPDCRLLATTS----------ADQTARIWNTEDFSLVRELGTA--N----QRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 10 ~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~--~----~~~v~~~~~~~~~~~i~ 64 (65)
.+.++|+++.+..+. .++.+.++|..+.+.+..+.-. . ......++++|++++++
T Consensus 122 gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~ly 192 (426)
T 3c75_H 122 HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLL 192 (426)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEE
T ss_pred ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEE
Confidence 788999998765554 3567999999988887766431 0 12346788899998765
No 207
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=97.15 E-value=0.005 Score=29.84 Aligned_cols=56 Identities=16% Similarity=0.061 Sum_probs=39.6
Q ss_pred cceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 6 AYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 6 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
.....+.++++++.+++...++.++.|+...+........ ..... ++|+|+++.++
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~--~~~~~-ia~~~~g~~l~ 186 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPG--FKGGK-PAVTKDKQRVY 186 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEET--CCBCB-CEECTTSSEEE
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeecc--CCCCc-eeEecCCCcEE
Confidence 3577889999888777777778999999887665544443 22233 88888887553
No 208
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=97.14 E-value=0.0051 Score=31.22 Aligned_cols=45 Identities=11% Similarity=0.142 Sum_probs=36.4
Q ss_pred CEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 18 RLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
..+++...++.+.++|..+++.+..+.. ....+.+.++|++++++
T Consensus 168 ~~~V~~~~~~~V~viD~~t~~v~~~i~~--g~~p~~v~~SpDGr~ly 212 (567)
T 1qks_A 168 LFSVTLRDAGQIALIDGSTYEIKTVLDT--GYAVHISRLSASGRYLF 212 (567)
T ss_dssp EEEEEETTTTEEEEEETTTCCEEEEEEC--SSCEEEEEECTTSCEEE
T ss_pred eEEEEeCCCCeEEEEECCCCeEEEEEeC--CCCccceEECCCCCEEE
Confidence 4567777789999999999988877764 44677999999999875
No 209
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=97.10 E-value=0.0041 Score=28.04 Aligned_cols=60 Identities=8% Similarity=-0.044 Sum_probs=41.7
Q ss_pred cccceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 4 HRAYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 4 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
....+..+.+.++++.+++...++.+..|+.. +.............+..+++.++++.++
T Consensus 13 ~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v 72 (299)
T 2z2n_A 13 QDTGPYGITVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWF 72 (299)
T ss_dssp SSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEE
T ss_pred cCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEE
Confidence 34568889999999877776667889999887 4433222111346788888888887664
No 210
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.05 E-value=0.0011 Score=34.32 Aligned_cols=55 Identities=13% Similarity=0.037 Sum_probs=35.2
Q ss_pred ceEEEEEC-CCCCEEEEecC-CC----cEEEEECCCC-ceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 7 YGLHCVFS-PDCRLLATTSA-DQ----TARIWNTEDF-SLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 7 ~v~~~~~~-~~~~~~~~~~~-~~----~~~~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
.+....|+ |++++++.... ++ .++++++.++ +.+.... ......++|+|+++.|+
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~---~~~~~~~~WspDg~~l~ 236 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKV---SGTNGEIVWGPDHTSLF 236 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCE---EEECSCCEECSSTTEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCccc---cCceeeEEEecCCCEEE
Confidence 46678999 99987764332 22 4889999877 5321111 11235688999987764
No 211
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=96.86 E-value=0.0089 Score=27.92 Aligned_cols=55 Identities=13% Similarity=0.035 Sum_probs=39.6
Q ss_pred ceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEc-cCCcEE
Q psy7061 7 YGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFT-LDSKFL 63 (65)
Q Consensus 7 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~i 63 (65)
.+..+.+.+++..+++...++.+..|+. .++.+..+.. +...+.+++|. ++++.+
T Consensus 231 ~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~-~~~~~~~~af~g~d~~~L 286 (326)
T 2ghs_A 231 GMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEV-PGKQTTCPAFIGPDASRL 286 (326)
T ss_dssp EEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEEC-SCSBEEEEEEESTTSCEE
T ss_pred CCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEEC-CCCCcEEEEEecCCCCEE
Confidence 3456778888887776666678888987 4666666655 55678999998 887654
No 212
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=96.86 E-value=0.014 Score=30.50 Aligned_cols=55 Identities=16% Similarity=0.046 Sum_probs=34.9
Q ss_pred EEEECCCCCEEEEecCC-----CcEEEEECCCCce--EEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 10 HCVFSPDCRLLATTSAD-----QTARIWNTEDFSL--VRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 10 ~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
.+.|+|+++.++....+ ..++.+++.++.. ...+..........+.|+|++++|+
T Consensus 225 ~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~ 286 (751)
T 2xe4_A 225 EIVWGPDHTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLC 286 (751)
T ss_dssp CCEECSSTTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEE
T ss_pred eEEEecCCCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEE
Confidence 57899999877665543 2577777765432 2222221234456789999999875
No 213
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=96.74 E-value=0.013 Score=28.15 Aligned_cols=52 Identities=6% Similarity=-0.121 Sum_probs=37.0
Q ss_pred EEECCCCCEEEEecC----------CCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCc-EEe
Q psy7061 11 CVFSPDCRLLATTSA----------DQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSK-FLL 64 (65)
Q Consensus 11 ~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~i~ 64 (65)
+.++++++.+..... .+.+.+.|..+.+.+..+.. ......++|+|+++ .++
T Consensus 272 ~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~--g~~p~~i~~s~Dg~~~l~ 334 (373)
T 2mad_H 272 VAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISL--GHDVDAISVAQDGGPDLY 334 (373)
T ss_pred EEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEEC--CCCcCeEEECCCCCeEEE
Confidence 567777765544322 34688889988888888764 44689999999998 443
No 214
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=96.62 E-value=0.016 Score=29.89 Aligned_cols=55 Identities=16% Similarity=0.080 Sum_probs=35.8
Q ss_pred EEEEECCCCCEEEEecCCC-------------cEEEEECCCCce--EEEeecc--CCCcEeEEEEccCCcEEe
Q psy7061 9 LHCVFSPDCRLLATTSADQ-------------TARIWNTEDFSL--VRELGTA--NQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~--~~~~~~~--~~~~v~~~~~~~~~~~i~ 64 (65)
..+.|+ |++.++.+..+. .|++|++.+... ...+... +...+..+.|+|++++|+
T Consensus 178 ~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~ 249 (693)
T 3iuj_A 178 SGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLL 249 (693)
T ss_dssp CCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEE
T ss_pred ccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEE
Confidence 456788 888877766553 488888875432 2222221 123467899999999874
No 215
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=96.37 E-value=0.028 Score=27.53 Aligned_cols=49 Identities=12% Similarity=0.064 Sum_probs=36.9
Q ss_pred ECCCCCEEEEecC-----CCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 13 FSPDCRLLATTSA-----DQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 13 ~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
..|+++.+..... ++.+.+.|..+.+.+..+.. .... . ++++|+++.++
T Consensus 40 ~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~v-G~~P-~-va~spDG~~ly 93 (386)
T 3sjl_D 40 PAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDG-GFLP-N-PVVADDGSFIA 93 (386)
T ss_dssp CCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEE-CSSC-E-EEECTTSSCEE
T ss_pred cCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEEC-CCCC-c-EEECCCCCEEE
Confidence 4678877666554 56899999999998888875 3444 4 99999998764
No 216
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=96.37 E-value=0.025 Score=29.41 Aligned_cols=50 Identities=14% Similarity=0.111 Sum_probs=35.3
Q ss_pred CCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 15 PDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
..+..++.++.++.++.||.++++.+-.+.........-+.|..+|++++
T Consensus 484 tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~ty~~~G~qyv 533 (689)
T 1yiq_A 484 TAGNLVFEGSADGRVIAYAADTGEKLWEQPAASGVMAAPVTYSVDGEQYV 533 (689)
T ss_dssp ETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEE
T ss_pred ECCCEEEEECCCCcEEEEECCCCccceeeeCCCCcccCceEEEECCEEEE
Confidence 35567788889999999999999988777652222223466667777654
No 217
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=96.28 E-value=0.025 Score=26.03 Aligned_cols=57 Identities=12% Similarity=0.001 Sum_probs=38.4
Q ss_pred cceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeec---cCCCcEeEEEEccCCcEEe
Q psy7061 6 AYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGT---ANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 6 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~i~ 64 (65)
..+..+.++++++.+++. +..+..|+..++........ .....+..++++|+++.++
T Consensus 54 ~~~~~i~~~~dG~l~v~~--~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~ 113 (297)
T 3g4e_A 54 APVSSVALRQSGGYVATI--GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFA 113 (297)
T ss_dssp SCEEEEEEBTTSSEEEEE--TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEE
T ss_pred CceEEEEECCCCCEEEEE--CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEE
Confidence 356788899998865544 46788899876654322221 1234578899999998765
No 218
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=96.26 E-value=0.037 Score=27.86 Aligned_cols=56 Identities=7% Similarity=0.114 Sum_probs=38.7
Q ss_pred EEEEECCCCCEEEEec-------------------CCCcEEEEECCCCceEEEeecc-CCCcEeEEEE--ccCCcEEe
Q psy7061 9 LHCVFSPDCRLLATTS-------------------ADQTARIWNTEDFSLVRELGTA-NQRWVWDAAF--TLDSKFLL 64 (65)
Q Consensus 9 ~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~--~~~~~~i~ 64 (65)
+.+.|+|+++.++++. ....|.+|++.+++.+.++... .......+.| +|+++++.
T Consensus 191 Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aY 268 (462)
T 2ece_A 191 YDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGF 268 (462)
T ss_dssp CCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEE
T ss_pred ceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEE
Confidence 3477799888877774 3688999999988777666541 1134445555 99987654
No 219
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=96.23 E-value=0.027 Score=25.97 Aligned_cols=58 Identities=10% Similarity=0.019 Sum_probs=37.9
Q ss_pred cceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeec---cCCCcEeEEEEccCCcEEe
Q psy7061 6 AYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGT---ANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 6 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~i~ 64 (65)
..+..+.++++++.+++....+.+..++.+ +........ .....+..+++.|+++.++
T Consensus 86 ~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~ 146 (305)
T 3dr2_A 86 AFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWF 146 (305)
T ss_dssp SCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEE
T ss_pred CccceeeECCCCCEEEEECCCCEEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEE
Confidence 346778899999877766666788888876 443222111 0123456788899988775
No 220
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=96.22 E-value=0.025 Score=25.53 Aligned_cols=57 Identities=11% Similarity=0.005 Sum_probs=38.6
Q ss_pred cceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeec-cCCCcEeEEEEccCCcEEe
Q psy7061 6 AYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGT-ANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 6 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~i~ 64 (65)
..+..+.+.+++..+++...++.+..|+.. +.. ..+.. .....+..+++.++++.++
T Consensus 57 ~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~-~~~~~~~~~~~~~~i~~~~~g~l~v 114 (299)
T 2z2n_A 57 AKVMCLTISSDGEVWFTENAANKIGRITKK-GII-KEYTLPNPDSAPYGITEGPNGDIWF 114 (299)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE-EEEECSSTTCCEEEEEECTTSCEEE
T ss_pred CceeeEEECCCCCEEEeCCCCCeEEEECCC-CcE-EEEeCCCcCCCceeeEECCCCCEEE
Confidence 457788888888877776667888888876 332 22221 1345678888888887654
No 221
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=96.20 E-value=0.03 Score=26.20 Aligned_cols=56 Identities=11% Similarity=0.012 Sum_probs=36.9
Q ss_pred ceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeec---cCCCcEeEEEEccCCcEEe
Q psy7061 7 YGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGT---ANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 7 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~i~ 64 (65)
.+..+.+.++++.++.. . ..+..|+..++........ .....+..++++|+++.++
T Consensus 91 ~v~~i~~~~dg~l~v~~-~-~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v 149 (326)
T 2ghs_A 91 MGSALAKISDSKQLIAS-D-DGLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWI 149 (326)
T ss_dssp CEEEEEEEETTEEEEEE-T-TEEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEE
T ss_pred cceEEEEeCCCeEEEEE-C-CCEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEE
Confidence 46778888888766654 3 3488889877664322221 0124678899999998765
No 222
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=95.86 E-value=0.055 Score=26.35 Aligned_cols=56 Identities=7% Similarity=0.072 Sum_probs=40.9
Q ss_pred ceEEEEECCCCCEEEEec-CCCcEEEEECCCCceEEEeeccC---------------CCcEeEEEEccCCcEEe
Q psy7061 7 YGLHCVFSPDCRLLATTS-ADQTARIWNTEDFSLVRELGTAN---------------QRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 7 ~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---------------~~~v~~~~~~~~~~~i~ 64 (65)
....+.++++++.+++-. .++.++.|++.++... .+.+ + -.....+++++++..++
T Consensus 324 ~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v~-~~~g-~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyV 395 (409)
T 3hrp_A 324 QPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYVS-TVAG-QVDVASQIDGTPLEATFNYPYDICYDGEGGYWI 395 (409)
T ss_dssp SEEEEEECTTCCEEEEETTTTCEEEEEETTTTEEE-EEEE-CTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEE
T ss_pred CCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEEE-EEeC-CCCCCCcCCCChhceEeCCceEEEEcCCCCEEE
Confidence 467889999999777777 7889999997666543 3332 1 13578899999887665
No 223
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=95.64 E-value=0.092 Score=27.36 Aligned_cols=51 Identities=20% Similarity=0.215 Sum_probs=36.2
Q ss_pred eEEEEECCCCCEEEE-ecCCCcEEEEECCCCc------------eEEEeeccCCCcEeEEEEccCC
Q psy7061 8 GLHCVFSPDCRLLAT-TSADQTARIWNTEDFS------------LVRELGTANQRWVWDAAFTLDS 60 (65)
Q Consensus 8 v~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~v~~~~~~~~~ 60 (65)
.-.+.++|||++++. ......+.+++..+.+ ...... -..+...++|+|+|
T Consensus 279 PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~--vG~gP~h~aF~~dG 342 (595)
T 1fwx_A 279 PHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPE--LGLGPLHTAFDGRG 342 (595)
T ss_dssp CCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCB--CCSCEEEEEECTTS
T ss_pred ceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcC--CCCCcceEEECCCC
Confidence 346889999987654 4467889999998542 222332 35677889999999
No 224
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=95.63 E-value=0.053 Score=24.48 Aligned_cols=58 Identities=7% Similarity=-0.135 Sum_probs=39.6
Q ss_pred cceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 6 AYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 6 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
..+..+.+.+++..+++...++.+..++.. ++............+..+++.++++.++
T Consensus 20 ~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v 77 (300)
T 2qc5_A 20 SGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWF 77 (300)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEE
T ss_pred CCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEE
Confidence 456788889988877777677889999877 4433211111335678888888877654
No 225
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=95.60 E-value=0.055 Score=24.44 Aligned_cols=58 Identities=7% Similarity=-0.062 Sum_probs=38.9
Q ss_pred cceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 6 AYGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 6 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
..+..+.+.+++..+++...++.+..++.. +.............+..+++.++++.++
T Consensus 62 ~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v 119 (300)
T 2qc5_A 62 AKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFTEYPLPQPDSGPYGITEGLNGDIWF 119 (300)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECSTTCEEE
T ss_pred CcceeEEECCCCCEEEEecCCCeEEEECCC-CCeEEecCCCCCCCCccceECCCCCEEE
Confidence 456778888888877776667888888877 4432211111235678888888887654
No 226
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=95.59 E-value=0.085 Score=26.64 Aligned_cols=58 Identities=10% Similarity=-0.018 Sum_probs=38.4
Q ss_pred ceEEEEECCCCCEE-EEecCCCcEEEEECCCC---ceEEEeeccCC-------------CcEeEEEEccCCcEEe
Q psy7061 7 YGLHCVFSPDCRLL-ATTSADQTARIWNTEDF---SLVRELGTANQ-------------RWVWDAAFTLDSKFLL 64 (65)
Q Consensus 7 ~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~---~~~~~~~~~~~-------------~~v~~~~~~~~~~~i~ 64 (65)
....+.++++++.+ ++....+.|.+|++... +.+........ ..-..++++|+|++++
T Consensus 322 ~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~Ly 396 (462)
T 2ece_A 322 LVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVY 396 (462)
T ss_dssp CCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEE
T ss_pred ceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEE
Confidence 46778899999876 44445788999998632 33433332100 1357888999998875
No 227
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=95.53 E-value=0.1 Score=27.25 Aligned_cols=49 Identities=10% Similarity=0.060 Sum_probs=33.4
Q ss_pred CCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEE
Q psy7061 15 PDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFL 63 (65)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i 63 (65)
..+..++.++.++.++.|+..+++.+..+.........-+.|.++++.+
T Consensus 486 ~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~y~~~G~~~ 534 (677)
T 1kb0_A 486 TAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAPSTYMVDGRQY 534 (677)
T ss_dssp ETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEE
T ss_pred eCCCEEEEECCCCcEEEEECCCCceeeeeeCCCCcccCCEEEEeCCEEE
Confidence 3456677788899999999999998888765222222344555666544
No 228
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=95.40 E-value=0.12 Score=26.94 Aligned_cols=57 Identities=19% Similarity=0.026 Sum_probs=37.5
Q ss_pred eEEEEECCCCCEEEEecCC----------C--cEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 8 GLHCVFSPDCRLLATTSAD----------Q--TARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 8 v~~~~~~~~~~~~~~~~~~----------~--~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
.=.+.|++.|.+++....+ + .+...+...++....+..+...++..++|+|+++.++
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlf 546 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLF 546 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEE
Confidence 3467899998876665432 1 2333344455555444444568999999999998875
No 229
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=95.09 E-value=0.1 Score=24.48 Aligned_cols=54 Identities=13% Similarity=0.000 Sum_probs=38.0
Q ss_pred eEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 8 GLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 8 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
...+.+. +++.+++...++.+.+++..+++.+..+.. ......++++++++.++
T Consensus 46 ~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i~~--~~~p~~i~~~~~g~lyv 99 (328)
T 3dsm_A 46 AQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRITG--FTSPRYIHFLSDEKAYV 99 (328)
T ss_dssp EEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEEEC--CSSEEEEEEEETTEEEE
T ss_pred ceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEEcCC--CCCCcEEEEeCCCeEEE
Confidence 3445553 345556666678999999999988777753 45678888888886544
No 230
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=95.04 E-value=0.1 Score=24.21 Aligned_cols=55 Identities=13% Similarity=0.038 Sum_probs=37.5
Q ss_pred ceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 7 YGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 7 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
....+.|+++++.+++-...+.+..++.... ...... .......+++.++++.++
T Consensus 33 ~pegia~~~~g~lyv~d~~~~~I~~~d~~g~-~~~~~~--~~~~p~gia~~~dG~l~v 87 (306)
T 2p4o_A 33 FLENLASAPDGTIFVTNHEVGEIVSITPDGN-QQIHAT--VEGKVSGLAFTSNGDLVA 87 (306)
T ss_dssp CEEEEEECTTSCEEEEETTTTEEEEECTTCC-EEEEEE--CSSEEEEEEECTTSCEEE
T ss_pred CcceEEECCCCCEEEEeCCCCeEEEECCCCc-eEEEEe--CCCCceeEEEcCCCcEEE
Confidence 4567788888887776667788888887643 322232 235677888888887654
No 231
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=95.02 E-value=0.028 Score=29.11 Aligned_cols=58 Identities=17% Similarity=0.206 Sum_probs=38.2
Q ss_pred ceEEEEECCCCCEEEEecCCCcEEEEECCC----------CceEEEeeccCCCcE-----eEEEEccCCcEEeC
Q psy7061 7 YGLHCVFSPDCRLLATTSADQTARIWNTED----------FSLVRELGTANQRWV-----WDAAFTLDSKFLLT 65 (65)
Q Consensus 7 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~v-----~~~~~~~~~~~i~s 65 (65)
....+.|+++|...++...++.+..|+++. ...+..+.. +...- .....+|+|+++++
T Consensus 332 gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV-~yqpGh~~~~~g~t~~~DGk~l~~ 404 (595)
T 1fwx_A 332 GPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDV-HYQPGHLKTVMGETLDATNDWLVC 404 (595)
T ss_dssp CEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEEC-SSCEEEEEETTTTSTTCCSSEEEE
T ss_pred CcceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeec-ccccccceeccceEeCCCCCEEEE
Confidence 356789999995556777899999999876 344545544 33321 12345788888763
No 232
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=94.87 E-value=0.14 Score=24.93 Aligned_cols=50 Identities=6% Similarity=-0.113 Sum_probs=36.4
Q ss_pred ceEEEEECCCCC-EEEEec-CCCcEEEEECCCCceEEEeeccCCCcEeEEEEcc
Q psy7061 7 YGLHCVFSPDCR-LLATTS-ADQTARIWNTEDFSLVRELGTANQRWVWDAAFTL 58 (65)
Q Consensus 7 ~v~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 58 (65)
....+.|+++++ .+++.. .++.|.++|+.+.+.+..+.. ....+.+++.+
T Consensus 315 ~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~v--g~~P~~i~~~~ 366 (368)
T 1mda_H 315 DSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVEL--DKGPESLSVQN 366 (368)
T ss_dssp EECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECCC--CSCCCEEECCC
T ss_pred CcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEEEEEC--CCCCCEEEeec
Confidence 356789999987 456666 589999999999998888774 33344555543
No 233
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=94.72 E-value=0.17 Score=25.20 Aligned_cols=46 Identities=9% Similarity=0.009 Sum_probs=33.7
Q ss_pred CCCEEEEecC-C----CcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 16 DCRLLATTSA-D----QTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 16 ~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
+++.+..... . +.+.++|..+.+.+..+.. .... .++++|+++.++
T Consensus 83 ~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~v-G~~P--gia~SpDgk~ly 133 (426)
T 3c75_H 83 DARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDG-GFLP--HPVAAEDGSFFA 133 (426)
T ss_dssp CTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEE-CSSC--EEEECTTSSCEE
T ss_pred CCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEEC-CCCC--ceEECCCCCEEE
Confidence 4555544443 2 5899999999999888876 4444 899999998764
No 234
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=94.72 E-value=0.25 Score=27.11 Aligned_cols=37 Identities=14% Similarity=0.170 Sum_probs=29.3
Q ss_pred ceEEEEECCCCCEEEEecCCCcEEEEECCCCceEEEe
Q psy7061 7 YGLHCVFSPDCRLLATTSADQTARIWNTEDFSLVREL 43 (65)
Q Consensus 7 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 43 (65)
.+.++...++...+.+-+.|+.+++|++.++.++.+.
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 273 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeee
Confidence 3556666667778889999999999999988776653
No 235
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=94.14 E-value=0.24 Score=24.48 Aligned_cols=56 Identities=7% Similarity=0.090 Sum_probs=35.8
Q ss_pred eEEEEECC-CCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEE
Q psy7061 8 GLHCVFSP-DCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFL 63 (65)
Q Consensus 8 v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i 63 (65)
...+.++| ++..+++-...+.+..++.+...............-..++++|+++++
T Consensus 228 p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~l 284 (430)
T 3tc9_A 228 CNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYA 284 (430)
T ss_dssp CCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEE
T ss_pred ceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEE
Confidence 34566788 677666666778888888875544222222122446789999999843
No 236
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=94.02 E-value=0.21 Score=23.55 Aligned_cols=57 Identities=16% Similarity=0.041 Sum_probs=37.7
Q ss_pred cccceEEEEECCCCCEEEEecC-----CCcEEEEECCCCceEEEeec-----cCCCcEeEEEEccCC
Q psy7061 4 HRAYGLHCVFSPDCRLLATTSA-----DQTARIWNTEDFSLVRELGT-----ANQRWVWDAAFTLDS 60 (65)
Q Consensus 4 ~~~~v~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~-----~~~~~v~~~~~~~~~ 60 (65)
+...+..+.++++++.++.-.. ...+..|++.+++.+..+.. .+......+++++++
T Consensus 65 ~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~ 131 (343)
T 2qe8_A 65 TFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIH 131 (343)
T ss_dssp CCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTT
T ss_pred ceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCC
Confidence 4457888999998875554322 47899999988876655542 012345788888753
No 237
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=93.37 E-value=0.44 Score=25.08 Aligned_cols=58 Identities=19% Similarity=0.024 Sum_probs=37.3
Q ss_pred ceEEEEECCCCCEEEEecCC------------CcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 7 YGLHCVFSPDCRLLATTSAD------------QTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 7 ~v~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
..-.+.|.++|.+.+..... ..+..++..+++....+........+.++|+|+++.|+
T Consensus 477 sPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLf 546 (592)
T 4a9v_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLF 546 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEE
T ss_pred CCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEE
Confidence 45678899988876643321 13455555556554444432346789999999998875
No 238
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=93.31 E-value=0.28 Score=22.73 Aligned_cols=61 Identities=13% Similarity=0.096 Sum_probs=39.8
Q ss_pred ccccceEEEEECCCCC-EEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 3 AHRAYGLHCVFSPDCR-LLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 3 ~~~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
+-...+..+.|+|++. .++....++.+...+.. ++.+..+.-......-.+++.+++.+++
T Consensus 24 g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~v 85 (255)
T 3qqz_A 24 GITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVI 85 (255)
T ss_dssp TCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEE
T ss_pred CcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEE
Confidence 3345688999999765 44556677778888887 6666665321234566677777766644
No 239
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=93.20 E-value=0.28 Score=27.39 Aligned_cols=36 Identities=14% Similarity=0.227 Sum_probs=27.7
Q ss_pred EEEEECCCCCEEEEecCCCcEEEEECCCCceEEEee
Q psy7061 9 LHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELG 44 (65)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 44 (65)
.++...++...+++-+.|+.+++|++.++.++.+..
T Consensus 241 vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 241 ISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp SCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred EEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 344445566788899999999999999988776643
No 240
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=92.41 E-value=0.41 Score=22.23 Aligned_cols=53 Identities=13% Similarity=-0.017 Sum_probs=34.4
Q ss_pred EEEEECCCCCEEEEecCCCcEEEEECCCCceEE--EeeccCCCcEeEEEEc---cCCcEE
Q psy7061 9 LHCVFSPDCRLLATTSADQTARIWNTEDFSLVR--ELGTANQRWVWDAAFT---LDSKFL 63 (65)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~v~~~~~~---~~~~~i 63 (65)
..+.+.++|+.+++....+.|..++.. ++... .... .-....+++|. |+++.+
T Consensus 215 ~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~~~~~~-~~~~p~~~a~~g~~~d~~~L 272 (306)
T 2p4o_A 215 DDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIAQAEQ-GVIGSTAVAFGQTEGDCTAI 272 (306)
T ss_dssp SSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEECGGG-TCTTEEEEEECCSTTTTTEE
T ss_pred CCeEECCCCCEEEEeCCCCeEEEECCC-CCEEEEeeccc-ccCCceEEEEecccCCCCEE
Confidence 346677788877776667888888865 44422 2222 23567889998 786554
No 241
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=91.63 E-value=0.78 Score=23.78 Aligned_cols=48 Identities=13% Similarity=0.070 Sum_probs=31.6
Q ss_pred CCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 17 CRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
+..++.++.++.++.++.++++.+-.+.........-+.|..++++++
T Consensus 497 gglvf~g~~dg~l~A~D~~tG~~lW~~~~~~g~~a~P~~y~~~G~qYv 544 (582)
T 1flg_A 497 GNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGEQYL 544 (582)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEE
T ss_pred CCEEEEECCCCcEEEEECCCCCEEEEecCCCCcccCceEEEECCEEEE
Confidence 445667888999999999999988777651111112255556776553
No 242
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=91.28 E-value=0.74 Score=22.88 Aligned_cols=54 Identities=9% Similarity=0.153 Sum_probs=32.8
Q ss_pred EEEEECC-CCCEEEEecCCCcEEEEECCCCceEEEe-eccCCCcEeEEEEccCCcE
Q psy7061 9 LHCVFSP-DCRLLATTSADQTARIWNTEDFSLVREL-GTANQRWVWDAAFTLDSKF 62 (65)
Q Consensus 9 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~ 62 (65)
..+.+++ ++..+++-..++.++.++..++.....+ .......-..++++|+++.
T Consensus 231 ~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~ 286 (433)
T 4hw6_A 231 KTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDW 286 (433)
T ss_dssp CCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSE
T ss_pred CEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCE
Confidence 4466777 6676666666778888887756542222 2111222346899999873
No 243
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=90.67 E-value=0.96 Score=23.11 Aligned_cols=57 Identities=16% Similarity=0.202 Sum_probs=39.0
Q ss_pred ccceEEEEECCCC---CEEEEecCCCcEEEEECCCCc--eEEEeec--------cCCCcEeEEEEccCCcE
Q psy7061 5 RAYGLHCVFSPDC---RLLATTSADQTARIWNTEDFS--LVRELGT--------ANQRWVWDAAFTLDSKF 62 (65)
Q Consensus 5 ~~~v~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~--~~~~~~~--------~~~~~v~~~~~~~~~~~ 62 (65)
...|..+.|+|-+ ..++.-..|+.+++|++.... +. .+.. .....+.+++|.+++-.
T Consensus 124 ~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~Fg~~~lT 193 (452)
T 3pbp_A 124 KSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLEFSKDGLT 193 (452)
T ss_dssp CCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEEECTTSSC
T ss_pred CCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEEEEcCCCcE
Confidence 3568999999954 578888999999999998521 11 1211 12266778888776543
No 244
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=89.26 E-value=1 Score=21.75 Aligned_cols=29 Identities=17% Similarity=0.066 Sum_probs=22.5
Q ss_pred CCCEEEEecCCCcEEEEECCCCceEEEee
Q psy7061 16 DCRLLATTSADQTARIWNTEDFSLVRELG 44 (65)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 44 (65)
++..++.++.++.++.|+..+++.+-.+.
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~ 36 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLK 36 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEec
Confidence 46678888889999999998887765443
No 245
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=89.09 E-value=0.91 Score=20.52 Aligned_cols=54 Identities=6% Similarity=-0.162 Sum_probs=32.6
Q ss_pred eEEEEECCCCC-EEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcE
Q psy7061 8 GLHCVFSPDCR-LLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKF 62 (65)
Q Consensus 8 v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 62 (65)
+..+.+++++. .+.+-...+.+..++++.......... .-.....+++++++..
T Consensus 38 ~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~-~~~~p~~ia~d~~~~~ 92 (267)
T 1npe_A 38 IIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQ-DLGSPEGIALDHLGRT 92 (267)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECT-TCCCEEEEEEETTTTE
T ss_pred EEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEEC-CCCCccEEEEEecCCe
Confidence 45677888654 445555577888888875443222222 2246678888876443
No 246
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=87.66 E-value=1.9 Score=22.62 Aligned_cols=48 Identities=8% Similarity=0.075 Sum_probs=30.5
Q ss_pred CCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 17 CRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
+..++.++.++.++.++.++++.+-.+.........-+.|..++++++
T Consensus 484 gg~vf~gt~dg~l~A~D~~tG~~lW~~~l~~g~~~~P~~y~~~G~qyv 531 (599)
T 1w6s_A 484 GDLVFYGTLDGYLKARDSDTGDLLWKFKIPSGAIGYPMTYTHKGTQYV 531 (599)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEE
T ss_pred CCEEEEECCCCeEEEEECCCCCEEEEeeCCCCcEeccEEEEeCCEEEE
Confidence 455666788999999999999887766541111122344455666543
No 247
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=87.26 E-value=1.8 Score=21.81 Aligned_cols=53 Identities=21% Similarity=0.126 Sum_probs=33.5
Q ss_pred ceEEEEECCCCCEEEEecCCCcEEEEECCCCceE--EEeec-----cCCCcEeEEEEccC
Q psy7061 7 YGLHCVFSPDCRLLATTSADQTARIWNTEDFSLV--RELGT-----ANQRWVWDAAFTLD 59 (65)
Q Consensus 7 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-----~~~~~v~~~~~~~~ 59 (65)
....+.|.|+++.+++....+.|+.++..++... ..+.. ........++|+|+
T Consensus 28 ~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pd 87 (454)
T 1cru_A 28 KPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPD 87 (454)
T ss_dssp SEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTT
T ss_pred CceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCC
Confidence 4567899999997777655556777765544332 12211 02456778999994
No 248
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=87.18 E-value=1.8 Score=21.61 Aligned_cols=55 Identities=18% Similarity=0.126 Sum_probs=35.7
Q ss_pred ceEEEEECCC---CCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 7 YGLHCVFSPD---CRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 7 ~v~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
....+.++|+ +..+++ ...+.++.+++.++.... +.. .......++++++++.++
T Consensus 140 ~P~gvavd~~s~~g~Lyv~-D~~~~I~~id~~~g~v~~-~~~-~~~~P~giavd~dG~lyV 197 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWV-GQRDAFRHVDFVNQYVDI-KTT-NIGQCADVNFTLNGDMVV 197 (433)
T ss_dssp CCCEEEECTTTTTCEEEEE-CBTSCEEEEETTTTEEEE-ECC-CCSCEEEEEECTTCCEEE
T ss_pred CCceEEEccccCCCEEEEE-eCCCCEEEEECCCCEEEE-eec-CCCCccEEEECCCCCEEE
Confidence 4567888884 444443 333788888887665543 333 345678899999988554
No 249
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=86.95 E-value=1.8 Score=21.51 Aligned_cols=55 Identities=13% Similarity=0.137 Sum_probs=32.9
Q ss_pred ceEEEEECC-CCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEE
Q psy7061 7 YGLHCVFSP-DCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFL 63 (65)
Q Consensus 7 ~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i 63 (65)
....+.++| +...+......+.++.+++...... .+.. .......++++++++.+
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~-~~~~-~~~~P~~ia~d~~G~~l 193 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVS-TVYS-GLSKVRTICWTHEADSM 193 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEE-EEEC-CCSCEEEEEECTTSSEE
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEE-EEec-CCCCcceEEEeCCCCEE
Confidence 345677886 3333333333367777787655433 3333 34567889999988743
No 250
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=86.81 E-value=1.8 Score=21.21 Aligned_cols=53 Identities=13% Similarity=0.066 Sum_probs=35.3
Q ss_pred ceEEEEECCCCCEEEEecCCCcEEEEECCCCce--EEEee---ccCCCcEeEEEEccC
Q psy7061 7 YGLHCVFSPDCRLLATTSADQTARIWNTEDFSL--VRELG---TANQRWVWDAAFTLD 59 (65)
Q Consensus 7 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~---~~~~~~v~~~~~~~~ 59 (65)
....+.|.|++..+++....+.|+.++...+.. +..+. .........++++|+
T Consensus 33 ~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pd 90 (347)
T 3das_A 33 SPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPD 90 (347)
T ss_dssp SEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTT
T ss_pred CceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccc
Confidence 456788999999877766578888887654443 21111 113567788999985
No 251
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=86.12 E-value=1.7 Score=20.47 Aligned_cols=53 Identities=9% Similarity=0.016 Sum_probs=36.5
Q ss_pred EEECCCCCEEEEecCCCcEEEEECCCCceEEEeecc-----------CCCcEeEEEEccCCcEEe
Q psy7061 11 CVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTA-----------NQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~v~~~~~~~~~~~i~ 64 (65)
+.|. +++..+.......+.+.|..+++.+..+... .....+.+||+|+.+.++
T Consensus 177 Le~~-~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lf 240 (262)
T 3nol_A 177 LEWV-DGEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLF 240 (262)
T ss_dssp EEEE-TTEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEE
T ss_pred eEEE-CCEEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEE
Confidence 5554 5666666666788888899998887776531 013458899999876653
No 252
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=86.04 E-value=2.4 Score=22.01 Aligned_cols=48 Identities=8% Similarity=0.037 Sum_probs=29.5
Q ss_pred CCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 17 CRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
+..+..++.++.++.++.++++.+-.+.......-.-+.+..+++.++
T Consensus 475 gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~~~~~G~~yv 522 (571)
T 2ad6_A 475 GGLVWYATLDGYLKALDNKDGKELWNFKMPSGGIGSPMTYSFKGKQYI 522 (571)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEE
T ss_pred CCEEEEEcCCCeEEEEECCCCCEEEEEeCCCCcEeeeEEEEECCEEEE
Confidence 445666778899999999999887776641111112233445665543
No 253
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=85.76 E-value=2.7 Score=22.29 Aligned_cols=30 Identities=7% Similarity=0.096 Sum_probs=24.3
Q ss_pred CCCEEEEecCCCcEEEEECCCCceEEEeec
Q psy7061 16 DCRLLATTSADQTARIWNTEDFSLVRELGT 45 (65)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 45 (65)
.+..++.+..++.++.++.++++.+..+..
T Consensus 468 ~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~ 497 (668)
T 1kv9_A 468 AGNLVFQGTAAGQMHAYSADKGEALWQFEA 497 (668)
T ss_dssp TTTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred CCCEEEEECCcccchhhhhhcChhheEecC
Confidence 455677788899999999999988877764
No 254
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=84.84 E-value=2.8 Score=21.70 Aligned_cols=54 Identities=9% Similarity=0.152 Sum_probs=33.1
Q ss_pred EEEEECC-CCCEEEEecCCCcEEEEECC-------CCce-----------EEE-eeccCCCcEeEEEEccCCcE
Q psy7061 9 LHCVFSP-DCRLLATTSADQTARIWNTE-------DFSL-----------VRE-LGTANQRWVWDAAFTLDSKF 62 (65)
Q Consensus 9 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~-------~~~~-----------~~~-~~~~~~~~v~~~~~~~~~~~ 62 (65)
..+..+| ++.++++-...+.++.++++ ++.. ... ........-..++|+|+++.
T Consensus 250 ~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~ 323 (496)
T 3kya_A 250 NGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKY 323 (496)
T ss_dssp CCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSE
T ss_pred eEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCE
Confidence 3556777 45666666777888888876 3332 112 11112344578999999984
No 255
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=83.91 E-value=3.8 Score=22.49 Aligned_cols=29 Identities=21% Similarity=0.526 Sum_probs=24.0
Q ss_pred CCCEEEEecCCCcEEEEECCCCceEEEee
Q psy7061 16 DCRLLATTSADQTARIWNTEDFSLVRELG 44 (65)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 44 (65)
+...+++-+.++.+++|++.++..+....
T Consensus 230 ~~~fLftL~~Dh~LRiWsL~t~~lv~t~D 258 (729)
T 3f7f_A 230 HERYLIVLTQNCHLKIWDLTSFTLIQDYD 258 (729)
T ss_dssp TTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred CCcEEEEEEcCCeEEEEEcCCCceEEeec
Confidence 46788999999999999999988665544
No 256
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=83.86 E-value=2.3 Score=19.89 Aligned_cols=56 Identities=9% Similarity=0.010 Sum_probs=31.3
Q ss_pred ceEEEEECCCCCEEEEecCCCcEEEEECCCCc------eEEEeeccCCCcEeEEEEccCCcEEe
Q psy7061 7 YGLHCVFSPDCRLLATTSADQTARIWNTEDFS------LVRELGTANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 7 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~v~~~~~~~~~~~i~ 64 (65)
.+..+.|+|++.+.+. .++.++..+..+.. .-..+....-.....+.|.|++.+++
T Consensus 42 ~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYa 103 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYA 103 (236)
T ss_dssp TCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEE
T ss_pred cceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEE
Confidence 4568999999987666 55666665554311 11122110112246677777777664
No 257
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=82.82 E-value=2.8 Score=20.23 Aligned_cols=51 Identities=24% Similarity=0.279 Sum_probs=31.0
Q ss_pred ceEEEEECCCCC-EEEEecCCCcEEEEECCCCceEEEee------ccCCCcEeEEEEccC
Q psy7061 7 YGLHCVFSPDCR-LLATTSADQTARIWNTEDFSLVRELG------TANQRWVWDAAFTLD 59 (65)
Q Consensus 7 ~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~v~~~~~~~~ 59 (65)
....+.|.|+++ .+++ ...+.|++++.+ +.....+. .........++++|+
T Consensus 19 ~P~~i~~~pdG~~l~V~-e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pd 76 (353)
T 2g8s_A 19 HPWALAFLPDNHGMLIT-LRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPD 76 (353)
T ss_dssp SEEEEEECSTTCCEEEE-ETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTT
T ss_pred CcEEEEEcCCCCEEEEE-eCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCC
Confidence 456788999998 6655 456888888753 22111111 112346688999984
No 258
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=80.13 E-value=3.3 Score=19.32 Aligned_cols=58 Identities=9% Similarity=0.070 Sum_probs=36.9
Q ss_pred cceEEEEECCC-CCEEEEecCCCcEEEEECCCCceEEEeec--cC------CCcEeEEEEccCCcEEe
Q psy7061 6 AYGLHCVFSPD-CRLLATTSADQTARIWNTEDFSLVRELGT--AN------QRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 6 ~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~------~~~v~~~~~~~~~~~i~ 64 (65)
.++..+.++|. +++++.+.....+..++.+. +.+..+.- .. -..--.+++.++|+.++
T Consensus 173 ~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g-~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyI 239 (255)
T 3qqz_A 173 DDVSGAEFNQQKNTLLVLSHESRALQEVTLVG-EVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYI 239 (255)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEECTTC-CEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEE
T ss_pred CCceeEEEcCCCCeEEEEECCCCeEEEEcCCC-CEEEEEEcCCccCCcccccCCCCeeEECCCCCEEE
Confidence 35678889885 45667777778888888663 33333221 00 12446889999988765
No 259
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=79.27 E-value=4.2 Score=20.00 Aligned_cols=57 Identities=9% Similarity=-0.018 Sum_probs=37.1
Q ss_pred ceEEEEECCCCCEEEEecCC-CcEEEEECCCCceEEEee-c----cCCCcEeEEEEccCCcEEe
Q psy7061 7 YGLHCVFSPDCRLLATTSAD-QTARIWNTEDFSLVRELG-T----ANQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 7 ~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~----~~~~~v~~~~~~~~~~~i~ 64 (65)
....+...++|+..++.+.. +.+...+.+.. ....+. . ........++++|+++.|+
T Consensus 138 ~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~-~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Li 200 (334)
T 2p9w_A 138 GVVQSAQDRDGNSYVAFALGMPAIARVSADGK-TVSTFAWESGNGGQRPGYSGITFDPHSNKLI 200 (334)
T ss_dssp EEEEEEECTTSCEEEEEEESSCEEEEECTTSC-CEEEEEECCCCSSSCCSCSEEEEETTTTEEE
T ss_pred CCceeEECCCCCEEEeCCCCCCeEEEEeCCCC-EEeeeeecCCCcccccCcceEEEeCCCCEEE
Confidence 36678889999988877776 76666666533 222221 1 1234467899999998775
No 260
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=79.25 E-value=4 Score=19.77 Aligned_cols=51 Identities=12% Similarity=0.008 Sum_probs=30.9
Q ss_pred ceEEEEECCCCCEEEEecCCCcEEEEECCCCc-eEEEee--ccCCCcEeEEEEccC
Q psy7061 7 YGLHCVFSPDCRLLATTSADQTARIWNTEDFS-LVRELG--TANQRWVWDAAFTLD 59 (65)
Q Consensus 7 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~v~~~~~~~~ 59 (65)
....+.|.|+++.+++ ...+.|+.++. ++. .+..+. .........++++|+
T Consensus 30 ~P~~ia~~pdG~l~V~-e~~g~I~~~d~-~G~~~~~~~~v~~~g~~g~~gia~~pd 83 (354)
T 3a9g_A 30 VPWSIAPLGGGRYLVT-ERPGRLVLISP-SGKKLVASFDVANVGEAGLLGLALHPE 83 (354)
T ss_dssp CEEEEEEEETTEEEEE-ETTTEEEEECS-SCEEEEEECCCCCSTTCSEEEEEECTT
T ss_pred CCeEEEEcCCCeEEEE-eCCCEEEEEeC-CCceEeeccceeecCCCceeeEEeCCC
Confidence 4567888888885555 44588887763 343 121111 112356788999997
No 261
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=77.74 E-value=4.1 Score=19.03 Aligned_cols=54 Identities=11% Similarity=-0.026 Sum_probs=30.1
Q ss_pred eEEEEECC-CCCEEEEecC-----------------CCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEE
Q psy7061 8 GLHCVFSP-DCRLLATTSA-----------------DQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFL 63 (65)
Q Consensus 8 v~~~~~~~-~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i 63 (65)
...+.+.+ +++..++-.. .+.+..++...+........ -.....++++|+++.+
T Consensus 128 p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~--~~~p~gia~~~dg~~l 199 (322)
T 2fp8_A 128 LYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLKE--LHVPGGAEVSADSSFV 199 (322)
T ss_dssp EEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEEE--ESCCCEEEECTTSSEE
T ss_pred cceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEeccC--CccCcceEECCCCCEE
Confidence 45677888 7876554322 24566677655543222211 1234567888887643
No 262
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=77.61 E-value=4.3 Score=19.13 Aligned_cols=37 Identities=11% Similarity=0.027 Sum_probs=27.6
Q ss_pred eEEEEECCCCCEEEEecC--CCcEEEEECCCCceEEEee
Q psy7061 8 GLHCVFSPDCRLLATTSA--DQTARIWNTEDFSLVRELG 44 (65)
Q Consensus 8 v~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 44 (65)
...+.|++++..+++.+. ++.+.+.++.+++.+....
T Consensus 23 ~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~ 61 (266)
T 2iwa_A 23 TQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHK 61 (266)
T ss_dssp EEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEE
T ss_pred cccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEe
Confidence 467889987665555443 5789999999988877764
No 263
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=75.86 E-value=5.1 Score=19.09 Aligned_cols=54 Identities=7% Similarity=-0.065 Sum_probs=36.3
Q ss_pred EEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeecc------------CCCcEeEEEEccCCcEE
Q psy7061 9 LHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTA------------NQRWVWDAAFTLDSKFL 63 (65)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~v~~~~~~~~~~~i 63 (65)
..+.|. +++..+.......+.+.|..+++.+..+... ...-.+.+||+|+++.+
T Consensus 184 NeLe~~-dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rl 249 (268)
T 3nok_A 184 NELECA-NGVIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRI 249 (268)
T ss_dssp EEEEEE-TTEEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCE
T ss_pred cccEEe-CCEEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEE
Confidence 344554 5666666666778888899988877766531 11356889999976544
No 264
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=75.74 E-value=4.4 Score=18.32 Aligned_cols=54 Identities=6% Similarity=-0.212 Sum_probs=30.6
Q ss_pred ceEEEEECCCC-CEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCc
Q psy7061 7 YGLHCVFSPDC-RLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSK 61 (65)
Q Consensus 7 ~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 61 (65)
....+.+++++ ..+++-...+.+.+++++.......... .......++++|++.
T Consensus 80 ~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~-~~~~P~~i~vd~~~g 134 (267)
T 1npe_A 80 SPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDT-GLVNPRGIVTDPVRG 134 (267)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECS-SCSSEEEEEEETTTT
T ss_pred CccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEEC-CCCCccEEEEeeCCC
Confidence 45667777754 4445555567788888764322222222 224567788888533
No 265
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=73.37 E-value=6.3 Score=19.04 Aligned_cols=50 Identities=18% Similarity=0.199 Sum_probs=31.2
Q ss_pred ceEEEEECCCCCEEEEecCCCcEEEEECCCCce--EEEee--ccCCCcEeEEEEccC
Q psy7061 7 YGLHCVFSPDCRLLATTSADQTARIWNTEDFSL--VRELG--TANQRWVWDAAFTLD 59 (65)
Q Consensus 7 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~--~~~~~~v~~~~~~~~ 59 (65)
....+.|.|+++.+++ ...+.|..++ ++.. +.... .........++++|+
T Consensus 32 ~P~~ia~~pdG~l~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pd 85 (352)
T 2ism_A 32 VPWALAFLPDGGMLIA-ERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPR 85 (352)
T ss_dssp CEEEEEECTTSCEEEE-ETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTT
T ss_pred CceEEEEcCCCeEEEE-eCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCC
Confidence 4567889999986655 4458888887 3332 11111 112456788999997
No 266
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=72.26 E-value=5.9 Score=18.26 Aligned_cols=24 Identities=13% Similarity=0.012 Sum_probs=10.9
Q ss_pred ECCCCCEEEEecCCCcEEEEECCCCceE
Q psy7061 13 FSPDCRLLATTSADQTARIWNTEDFSLV 40 (65)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 40 (65)
..+++..++.. +.+..++ .++...
T Consensus 184 ~d~~g~l~v~t---~~l~~~d-~~g~~~ 207 (330)
T 3hxj_A 184 IGKDGTIYFGS---DKVYAIN-PDGTEK 207 (330)
T ss_dssp ECTTCCEEEES---SSEEEEC-TTSCEE
T ss_pred EcCCCEEEEEe---CEEEEEC-CCCcEE
Confidence 33444433332 5556666 444433
No 267
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=62.14 E-value=11 Score=17.63 Aligned_cols=54 Identities=13% Similarity=0.065 Sum_probs=35.6
Q ss_pred EEEECCCCCEEEEecCCCcEEEEECCCCceEEEeecc------------CCCcEeEEEEccCCcEEe
Q psy7061 10 HCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTA------------NQRWVWDAAFTLDSKFLL 64 (65)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~v~~~~~~~~~~~i~ 64 (65)
.+.|. +++..+.......+.+.|..+++.+..+.-. .....+.++|+|+++.++
T Consensus 154 eLe~~-~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lf 219 (243)
T 3mbr_X 154 ELEWV-NGELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLF 219 (243)
T ss_dssp EEEEE-TTEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEE
T ss_pred eeEEe-CCEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEE
Confidence 34443 4665566656778888899988887766531 123558899999766553
No 268
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=58.97 E-value=15 Score=18.06 Aligned_cols=32 Identities=9% Similarity=-0.069 Sum_probs=19.2
Q ss_pred ceEEEEECCCCCE-EEEecCCCcEEEEECCCCc
Q psy7061 7 YGLHCVFSPDCRL-LATTSADQTARIWNTEDFS 38 (65)
Q Consensus 7 ~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 38 (65)
.+..++|++.... +.+-...+.++.++++...
T Consensus 117 ~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~ 149 (386)
T 3v65_B 117 NAIALDFHHRRELVFWSDVTLDRILRANLNGSN 149 (386)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCC
T ss_pred ccEEEEEecCCCeEEEEeCCCCcEEEEecCCCC
Confidence 3556778765443 3444456677777776543
No 269
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=56.12 E-value=23 Score=19.27 Aligned_cols=49 Identities=8% Similarity=-0.153 Sum_probs=22.9
Q ss_pred EEEECCC-CCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccC
Q psy7061 10 HCVFSPD-CRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLD 59 (65)
Q Consensus 10 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 59 (65)
.+++.+. ++.+++-...+.|.+++++.......... .......+++.|.
T Consensus 457 glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~-~~~~P~giavDp~ 506 (699)
T 1n7d_A 457 GLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRE-QGSKPRAIVVDPV 506 (699)
T ss_dssp CEECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECCC-SSCCCCCEECCSS
T ss_pred eEEEEeeCCcEEEEeccCCeEEEEecCCCceEEEEeC-CCCCcceEEEccC
Confidence 4555543 33344434456777777664332222221 1233445566654
No 270
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=54.45 E-value=17 Score=17.37 Aligned_cols=27 Identities=19% Similarity=0.085 Sum_probs=19.7
Q ss_pred CEEEEecCCCcEEEEECCCCceEEEee
Q psy7061 18 RLLATTSADQTARIWNTEDFSLVRELG 44 (65)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 44 (65)
..+..+..++.+..++..+++.+....
T Consensus 319 ~~l~v~~~~g~l~~~d~~tG~~~~~~~ 345 (376)
T 3q7m_A 319 GNLVVGDSEGYLHWINVEDGRFVAQQK 345 (376)
T ss_dssp TEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEEe
Confidence 456667778889999988887665544
No 271
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=51.87 E-value=24 Score=18.22 Aligned_cols=53 Identities=15% Similarity=0.124 Sum_probs=30.9
Q ss_pred ceEEEEECCCCC-EEEEecCCCcEEEEECCCC---ceEEEeec--------cCCCcEeEEEEccC
Q psy7061 7 YGLHCVFSPDCR-LLATTSADQTARIWNTEDF---SLVRELGT--------ANQRWVWDAAFTLD 59 (65)
Q Consensus 7 ~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~---~~~~~~~~--------~~~~~v~~~~~~~~ 59 (65)
....+.|.|++. .++.+...+.|++++.+.. ..+..+.. ........++++|+
T Consensus 15 ~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~ 79 (463)
T 2wg3_C 15 QPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPN 79 (463)
T ss_dssp SEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTT
T ss_pred CceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCC
Confidence 355788899885 3444456788888865422 11221111 01456788899886
No 272
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=51.70 E-value=23 Score=17.99 Aligned_cols=43 Identities=5% Similarity=-0.040 Sum_probs=27.5
Q ss_pred EEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeE
Q psy7061 10 HCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWD 53 (65)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 53 (65)
++..++.-..+..-..-|.+++||+.++.++..-.- ....+..
T Consensus 264 amqvs~kygviyviTK~G~ihlyDleTgt~i~~nrI-S~d~iF~ 306 (365)
T 2xzh_A 264 AMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRI-SGETIFV 306 (365)
T ss_dssp EEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEEC-CSSCEEE
T ss_pred EEEecccCCEEEEEeCCcEEEEEEcccCcEEEEecc-CCCceEE
Confidence 344444434455556678999999999988776554 3444443
No 273
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=50.92 E-value=22 Score=17.64 Aligned_cols=56 Identities=13% Similarity=0.240 Sum_probs=33.0
Q ss_pred ceEEEEECCCCCEE-EEecCCCcEEEEECCC-Cce--EEEeeccCCCcEeEEEEcc-CCcEEe
Q psy7061 7 YGLHCVFSPDCRLL-ATTSADQTARIWNTED-FSL--VRELGTANQRWVWDAAFTL-DSKFLL 64 (65)
Q Consensus 7 ~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~v~~~~~~~-~~~~i~ 64 (65)
....+.|+|+++.+ ++-+..+.+..|+++. +.. ...+ . .....-.++..+ +|...+
T Consensus 222 ~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~-~-~~g~PDGi~vD~e~G~lwv 282 (355)
T 3sre_A 222 FANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVL-S-FDTLVDNISVDPVTGDLWV 282 (355)
T ss_dssp SEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE-E-CSSEEEEEEECTTTCCEEE
T ss_pred ccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEE-e-CCCCCceEEEeCCCCcEEE
Confidence 35678999998754 5555678889888763 322 1122 1 234445566666 366543
No 274
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=50.05 E-value=23 Score=17.58 Aligned_cols=53 Identities=9% Similarity=-0.165 Sum_probs=26.8
Q ss_pred eEEEEECCC-CCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCCc
Q psy7061 8 GLHCVFSPD-CRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSK 61 (65)
Q Consensus 8 v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 61 (65)
...+++.+. ++.+.+-...+.+.+.+++.......... .-.....+++.|.+.
T Consensus 161 p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~-~~~~P~~iavdp~~g 214 (400)
T 3p5b_L 161 PDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRE-NGSKPRAIVVDPVHG 214 (400)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEEC-SSCCEEEEEEETTTT
T ss_pred cccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeC-CCCCcceEEEecccC
Confidence 345555553 34444444556677777664433323332 234456777776433
No 275
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=49.60 E-value=22 Score=17.21 Aligned_cols=51 Identities=10% Similarity=-0.093 Sum_probs=25.6
Q ss_pred eEEEEECCCCCEE-EEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccC
Q psy7061 8 GLHCVFSPDCRLL-ATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLD 59 (65)
Q Consensus 8 v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 59 (65)
+..++|++....+ .+-...+.++.++++.......... .......+++.+.
T Consensus 75 ~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~-~~~~p~glavd~~ 126 (349)
T 3v64_C 75 AIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVST-GLESPGGLAVDWV 126 (349)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECS-SCSCCCEEEEETT
T ss_pred eEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeC-CCCCccEEEEecC
Confidence 4667777654444 3434566777777764432222221 1223345555543
No 276
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=48.12 E-value=30 Score=18.42 Aligned_cols=28 Identities=7% Similarity=0.204 Sum_probs=19.2
Q ss_pred EEECCCCCEEEEecC-CCcEEEEECCCCc
Q psy7061 11 CVFSPDCRLLATTSA-DQTARIWNTEDFS 38 (65)
Q Consensus 11 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 38 (65)
..+..+++.++.++. +..+.+|+..+..
T Consensus 248 ~~~~~~g~lyv~GG~~~~~v~~yd~~t~~ 276 (656)
T 1k3i_A 248 ISMDGNGQIVVTGGNDAKKTSLYDSSSDS 276 (656)
T ss_dssp EEECTTSCEEEECSSSTTCEEEEEGGGTE
T ss_pred ccCCCCCCEEEeCCCCCCceEEecCcCCc
Confidence 455667787777763 4578888877554
No 277
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=47.45 E-value=23 Score=16.92 Aligned_cols=13 Identities=8% Similarity=-0.299 Sum_probs=6.7
Q ss_pred EECCCCCEEEEec
Q psy7061 12 VFSPDCRLLATTS 24 (65)
Q Consensus 12 ~~~~~~~~~~~~~ 24 (65)
.++++++++....
T Consensus 110 ~~s~~g~~Iy~~~ 122 (302)
T 3s25_A 110 YASLIGNYIYYLH 122 (302)
T ss_dssp EEEEETTEEEEEE
T ss_pred EEEEeCCEEEEEe
Confidence 4455566555443
No 278
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=45.29 E-value=34 Score=18.87 Aligned_cols=25 Identities=4% Similarity=0.084 Sum_probs=21.0
Q ss_pred EEEecCCCcEEEEECCCCceEEEee
Q psy7061 20 LATTSADQTARIWNTEDFSLVRELG 44 (65)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~ 44 (65)
+.+++..|.++++.+.+.+.+..+.
T Consensus 73 f~SgG~sG~v~v~G~PSmR~l~~Ip 97 (638)
T 3sbq_A 73 FWSGGHQGEVRVLGVPSMRELMRIP 97 (638)
T ss_dssp EEECGGGCCEEEEEETTTEEEEEEC
T ss_pred EeecCcCceEEEEecCCcceEEEee
Confidence 6788889999999999988877654
No 279
>2loj_A Putative cytoplasmic protein; pathogenic bacterial protein, PSI-biology, northeast structu genomics consortium (NESG); NMR {Salmonella enterica subsp}
Probab=38.80 E-value=19 Score=13.27 Aligned_cols=19 Identities=26% Similarity=0.142 Sum_probs=14.9
Q ss_pred CCCcEeEEEEccCCcEEeC
Q psy7061 47 NQRWVWDAAFTLDSKFLLT 65 (65)
Q Consensus 47 ~~~~v~~~~~~~~~~~i~s 65 (65)
|.+....+.....|+.|+|
T Consensus 44 H~G~~Y~LR~Tr~GKLILT 62 (63)
T 2loj_A 44 HNGQEYLLRKTQAGKLLLT 62 (63)
T ss_dssp ETTEEEEEEEETTTEEEEE
T ss_pred eCCeEEEeEEccCCceeec
Confidence 6777888888888888764
No 280
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=38.50 E-value=53 Score=18.47 Aligned_cols=52 Identities=10% Similarity=-0.170 Sum_probs=27.5
Q ss_pred eEEEEECCCC-CEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccCC
Q psy7061 8 GLHCVFSPDC-RLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLDS 60 (65)
Q Consensus 8 v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 60 (65)
...+++.+.+ +.+.+-...+.|.+.+++.......... .-.....+++.|..
T Consensus 473 P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~-~l~~P~gIaVDp~~ 525 (791)
T 3m0c_C 473 PDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRE-NGSKPRAIVVDPVH 525 (791)
T ss_dssp CCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEEC-TTCCEEEEEEETTT
T ss_pred cceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeC-CCCCcceEEEecCC
Confidence 3445555544 3444444566777777764433222222 33446677777753
No 281
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=37.48 E-value=49 Score=17.71 Aligned_cols=45 Identities=4% Similarity=-0.020 Sum_probs=28.8
Q ss_pred EEEEECCCCCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEE
Q psy7061 9 LHCVFSPDCRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDA 54 (65)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 54 (65)
..+..++.-..+..-..-|.+++||+.++..+..-.- ....+...
T Consensus 262 vamqvs~kygviyviTK~G~i~lyDleTgt~i~~nrI-s~~~iF~t 306 (494)
T 1bpo_A 262 VAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRI-SGETIFVT 306 (494)
T ss_dssp EEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEEC-CSSCEEEE
T ss_pred eEEEecccCCEEEEEecCceEEEEecccceeeeeecc-cCCceEEe
Confidence 3444555444455566778999999999988776554 34444433
No 282
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=36.80 E-value=37 Score=16.11 Aligned_cols=55 Identities=18% Similarity=0.067 Sum_probs=27.3
Q ss_pred eEEEEECCCCCEEEEecC-C-CcEEEEECCCCceEEEeeccCCCcEeEEEEccCCcEE
Q psy7061 8 GLHCVFSPDCRLLATTSA-D-QTARIWNTEDFSLVRELGTANQRWVWDAAFTLDSKFL 63 (65)
Q Consensus 8 v~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i 63 (65)
...+.++|.+..+..+.. . +.+...+++. .....+....-.....++++|++..+
T Consensus 122 P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG-~~~~~~~~~~~~~P~gla~d~~~~~l 178 (316)
T 1ijq_A 122 PRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG-VDIYSLVTENIQWPNGITLDLLSGRL 178 (316)
T ss_dssp EEEEEEETTTTEEEEEECSSSCEEEEEETTS-CCEEEEECSSCSCEEEEEEETTTTEE
T ss_pred cceEEeCCCCCEEEEEccCCCCeEEEEcCCC-CCeEEEEECCCCCceEEEEeccCCEE
Confidence 456667764443333332 2 5666666653 22222221123455678888765443
No 283
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=35.80 E-value=39 Score=16.12 Aligned_cols=56 Identities=16% Similarity=0.186 Sum_probs=26.4
Q ss_pred cceEEEEECCCCCEEEEecCCCcEEE-EECCCCceEEEeeccCCCcEeEEEEccCCcEE
Q psy7061 6 AYGLHCVFSPDCRLLATTSADQTARI-WNTEDFSLVRELGTANQRWVWDAAFTLDSKFL 63 (65)
Q Consensus 6 ~~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i 63 (65)
..+..+.+.+++..++.+.. +.++. .+. .+.............+..+.+.++++.+
T Consensus 163 ~~~~~~~~~~~~~~~~~g~~-G~~~~S~d~-gG~tW~~~~~~~~~~~~~~~~~~~g~~~ 219 (327)
T 2xbg_A 163 GVMRNLNRSPSGEYVAVSSR-GSFYSTWEP-GQTAWEPHNRTTSRRLHNMGFTPDGRLW 219 (327)
T ss_dssp CCEEEEEECTTSCEEEEETT-SSEEEEECT-TCSSCEEEECCSSSCEEEEEECTTSCEE
T ss_pred cceEEEEEcCCCcEEEEECC-CcEEEEeCC-CCCceeECCCCCCCccceeEECCCCCEE
Confidence 35667788887776665543 33333 221 1221111111133455666666655443
No 284
>2ldu_A Heat shock factor protein 1; structural genomics, northeast structural genomics consortiu DNA-binding, PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=35.24 E-value=29 Score=14.48 Aligned_cols=12 Identities=0% Similarity=-0.114 Sum_probs=8.3
Q ss_pred eEEEEccCCcEE
Q psy7061 52 WDAAFTLDSKFL 63 (65)
Q Consensus 52 ~~~~~~~~~~~i 63 (65)
..+.|+++|+-+
T Consensus 35 ~iI~W~~~G~sF 46 (125)
T 2ldu_A 35 ALICWSPSGNSF 46 (125)
T ss_dssp TTEEECTTSSEE
T ss_pred CEEEEcCCCCEE
Confidence 457788887754
No 285
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=33.11 E-value=45 Score=16.01 Aligned_cols=49 Identities=10% Similarity=-0.155 Sum_probs=22.9
Q ss_pred EEEECCC-CCEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccC
Q psy7061 10 HCVFSPD-CRLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLD 59 (65)
Q Consensus 10 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 59 (65)
.+.+.+. +..+.+-...+.+.+++++.......... .-.....+++.|.
T Consensus 83 glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~-~~~~P~giavdp~ 132 (318)
T 3sov_A 83 GLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQ-ELDQPRAIALDPS 132 (318)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECS-SCSSEEEEEEEGG
T ss_pred EEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeC-CCCCccEEEEeCC
Confidence 3555543 33344444556677777653322212212 2334456666654
No 286
>1hks_A Heat-shock transcription factor; transcription regulation; NMR {Drosophila melanogaster} SCOP: a.4.5.22 PDB: 1hkt_A
Probab=29.38 E-value=22 Score=14.26 Aligned_cols=12 Identities=17% Similarity=0.111 Sum_probs=7.2
Q ss_pred eEEEEccCCcEE
Q psy7061 52 WDAAFTLDSKFL 63 (65)
Q Consensus 52 ~~~~~~~~~~~i 63 (65)
..+.|+++|+-+
T Consensus 22 ~iI~W~~~G~sF 33 (106)
T 1hks_A 22 RLICWTKDGQSF 33 (106)
T ss_dssp TTSEESTTTSCE
T ss_pred CEEEEeCCCCEE
Confidence 346677776543
No 287
>1ukf_A Avirulence protein AVRPPH3; AVRPPHB, hypersensitive response, hydrolase; 1.35A {Pseudomonas syringae PV} SCOP: d.3.1.10
Probab=28.57 E-value=50 Score=15.13 Aligned_cols=34 Identities=9% Similarity=0.043 Sum_probs=23.3
Q ss_pred cceEEEEECCCC-CEEEEecCCCcEEEEECCCCce
Q psy7061 6 AYGLHCVFSPDC-RLLATTSADQTARIWNTEDFSL 39 (65)
Q Consensus 6 ~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 39 (65)
+-+..+.|..++ .-++....++.+.+||+.-|+.
T Consensus 119 ~hllsl~f~~g~aHaia~S~~g~~~tlFDPN~GEF 153 (188)
T 1ukf_A 119 KHLLSLRFANVQGHAIACSCEGSQFKLFDPNLGEF 153 (188)
T ss_dssp EEEEEEEETTTEEEEEEEEEETTEEEEEETTTEEE
T ss_pred ceEEEEEecCCCceeEEeccCCCeEEEeCCCCcee
Confidence 345667777654 3466666788999999886654
No 288
>2dk7_A Transcription elongation regulator 1; structural genomics, WW domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=28.50 E-value=33 Score=13.04 Aligned_cols=25 Identities=12% Similarity=0.104 Sum_probs=17.9
Q ss_pred CCCCCEEEEecCCCcEEEEECCCCc
Q psy7061 14 SPDCRLLATTSADQTARIWNTEDFS 38 (65)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~ 38 (65)
-|...+...-..++.+++|+..+..
T Consensus 17 ipgt~W~~v~T~dGR~fyyN~~Tk~ 41 (73)
T 2dk7_A 17 IPGTPWCVVWTGDERVFFYNPTTRL 41 (73)
T ss_dssp CSSSSCEEEEESSSCEEEEETTTTE
T ss_pred CCCCCcEEEECCCCCEEEecCcccc
Confidence 3445677767789999999877543
No 289
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=27.36 E-value=80 Score=17.09 Aligned_cols=52 Identities=10% Similarity=-0.188 Sum_probs=27.4
Q ss_pred ceEEEEECCCC-CEEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEccC
Q psy7061 7 YGLHCVFSPDC-RLLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTLD 59 (65)
Q Consensus 7 ~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 59 (65)
....+++.+.+ +.+.+-...+.+.+.+++.......... .-.....+++.|.
T Consensus 85 ~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~~l~~~-~l~~P~~Iavdp~ 137 (619)
T 3s94_A 85 SPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQ-ELDQPRAIALDPS 137 (619)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECS-SCSCCCCEEEETT
T ss_pred CcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCEEEEEeC-CCCCCceEEEecC
Confidence 34566776644 4445555567788888764332222212 2233456666664
No 290
>3u0a_A Acyl-COA thioesterase II TESB2; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, hydrolase; 2.50A {Mycobacterium marinum}
Probab=26.60 E-value=54 Score=15.70 Aligned_cols=10 Identities=20% Similarity=0.318 Sum_probs=4.8
Q ss_pred EEEEECCCCce
Q psy7061 29 ARIWNTEDFSL 39 (65)
Q Consensus 29 ~~~~~~~~~~~ 39 (65)
-.+|+.+ |+.
T Consensus 255 g~i~~~~-G~L 264 (285)
T 3u0a_A 255 GKIFTQG-GEL 264 (285)
T ss_dssp EEEEETT-CCE
T ss_pred EEEECCC-CCE
Confidence 4466643 443
No 291
>3mwp_A Nucleoprotein; structural genomics, scottish structural PROT facility, SSPF, nuclear protein; 1.79A {Lassa virus josiah} PDB: 3mwt_A 3mx2_A* 3mx5_A* 3r3l_A 3t5q_A 3t5n_A
Probab=25.49 E-value=21 Score=18.86 Aligned_cols=18 Identities=22% Similarity=0.621 Sum_probs=11.6
Q ss_pred EecCCCcEEEEECCCCce
Q psy7061 22 TTSADQTARIWNTEDFSL 39 (65)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~ 39 (65)
.+..++.|++||+.+...
T Consensus 162 ~~~~~GVVrvWDVkd~sl 179 (577)
T 3mwp_A 162 RAGRDGVVRVWDVKNAEL 179 (577)
T ss_dssp ----CCEECSEECSCGGG
T ss_pred CCCCCCeEEEEecCCHHH
Confidence 456689999999987654
No 292
>2jra_A Protein RPA2121; domain-swapped dimer, structural genomics, PSI, protein STRU initiative, northeast structural genomics consortium; NMR {Rhodopseudomonas palustris}
Probab=25.41 E-value=38 Score=12.65 Aligned_cols=17 Identities=12% Similarity=0.208 Sum_probs=7.8
Q ss_pred cccceEEEEECCCCCEE
Q psy7061 4 HRAYGLHCVFSPDCRLL 20 (65)
Q Consensus 4 ~~~~v~~~~~~~~~~~~ 20 (65)
|.+..+.+.....|+.|
T Consensus 48 H~G~~Y~LR~Tr~GKLI 64 (67)
T 2jra_A 48 HGDDRYRLRLTSQNKLI 64 (67)
T ss_dssp ETTEEEEEEECTTSCEE
T ss_pred eCCeEEEeEEccCCcee
Confidence 34444444444444444
No 293
>1zso_A Hypothetical protein; structural genomics, PSI, protein structure initiative, STRU genomics of pathogenic protozoa consortium, SGPP; 2.17A {Plasmodium falciparum} SCOP: b.166.1.1
Probab=24.87 E-value=56 Score=14.50 Aligned_cols=29 Identities=14% Similarity=0.012 Sum_probs=18.6
Q ss_pred eEEEEECCCCCEEEEecCCCcEEEEECCC
Q psy7061 8 GLHCVFSPDCRLLATTSADQTARIWNTED 36 (65)
Q Consensus 8 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 36 (65)
+.-+.|.|++.+.+.+...+...=.++..
T Consensus 112 lEp~eF~p~~~w~a~~~esG~f~dvDLse 140 (164)
T 1zso_A 112 IELIDFFPSNNFIVEDTKGKLYYDVNLSD 140 (164)
T ss_dssp EEEEEECCCSCEEEEETTSCEEEEECCTT
T ss_pred eeeEEEecCCcEEEEECCCCcEEeeecCC
Confidence 34578999988888887666222234443
No 294
>3rd7_A Acyl-COA thioesterase; seattle structur genomics center for infectious disease, ssgcid, hydrolase; 1.95A {Mycobacterium avium}
Probab=24.58 E-value=39 Score=16.15 Aligned_cols=14 Identities=21% Similarity=0.183 Sum_probs=7.3
Q ss_pred EEEEECCCCceEEEe
Q psy7061 29 ARIWNTEDFSLVREL 43 (65)
Q Consensus 29 ~~~~~~~~~~~~~~~ 43 (65)
-++|+. +|+.+.+.
T Consensus 262 g~i~~~-~G~LVAs~ 275 (286)
T 3rd7_A 262 GTLYNR-SGELVCIA 275 (286)
T ss_dssp EEEEET-TSCEEEEE
T ss_pred EEEECC-CCCEEEEE
Confidence 456774 35554443
No 295
>3q7x_A De novo designed beta-trefoil architecture with S primary structure; beta-terfoil, de novo protein; 1.40A {Synthetic} PDB: 3q7w_A 3o4d_A 3q7y_A 3o4b_A 3o4c_A 3o4a_A* 3o49_A
Probab=21.86 E-value=59 Score=13.64 Aligned_cols=8 Identities=25% Similarity=0.356 Sum_probs=3.4
Q ss_pred EEECCCCC
Q psy7061 11 CVFSPDCR 18 (65)
Q Consensus 11 ~~~~~~~~ 18 (65)
+...|+|.
T Consensus 19 L~I~~dG~ 26 (132)
T 3q7x_A 19 LRINPDGT 26 (132)
T ss_dssp EEECTTSB
T ss_pred EEECCCCc
Confidence 33344444
No 296
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=21.30 E-value=1.1e+02 Score=16.64 Aligned_cols=55 Identities=9% Similarity=-0.066 Sum_probs=31.1
Q ss_pred ceEEEEECCCCC-EEEEecCCCcEEEEECCCCceEEEeeccCCCcEeEEEEcc-CCcE
Q psy7061 7 YGLHCVFSPDCR-LLATTSADQTARIWNTEDFSLVRELGTANQRWVWDAAFTL-DSKF 62 (65)
Q Consensus 7 ~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~ 62 (65)
.+..+++...+. ...+-...+.+.+.+++ +.....+....-.....+++.| .+..
T Consensus 390 ~p~glAvD~~~~nLY~td~~~~~I~v~~~~-G~~~~~l~~~~l~~Pr~iavdp~~g~l 446 (628)
T 4a0p_A 390 QPYDLSIDIYSRYIYWTCEATNVINVTRLD-GRSVGVVLKGEQDRPRAVVVNPEKGYM 446 (628)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETT-SCEEEEEEECTTCCEEEEEEETTTTEE
T ss_pred CcceEEeeccCCeEEEEcCCCCEEEEEECC-CCeEEEEEeCCCCceeeEEEecCCCeE
Confidence 355667766544 44455556777777776 3333333321345567788877 4443
No 297
>3p6j_A De novo designed beta-trefoil architecture with S primary structure; de novo protein; 1.35A {Synthetic}
Probab=21.16 E-value=65 Score=13.83 Aligned_cols=11 Identities=9% Similarity=-0.121 Sum_probs=6.4
Q ss_pred EEEEccCCcEE
Q psy7061 53 DAAFTLDSKFL 63 (65)
Q Consensus 53 ~~~~~~~~~~i 63 (65)
-++++.+|+..
T Consensus 127 YLamnk~Grly 137 (142)
T 3p6j_A 127 YLRINPDGTVD 137 (142)
T ss_dssp EEEECTTSBEE
T ss_pred EEEECCCcCCc
Confidence 45566666544
Done!