Query psy7062
Match_columns 148
No_of_seqs 124 out of 1486
Neff 10.4
Searched_HMMs 46136
Date Fri Aug 16 17:08:57 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7062.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/7062hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0271|consensus 99.9 2.8E-22 6E-27 141.1 11.2 117 14-140 118-248 (480)
2 KOG0272|consensus 99.9 2.3E-22 5E-27 142.6 6.8 112 14-135 264-383 (459)
3 KOG0263|consensus 99.9 4.7E-21 1E-25 144.1 12.2 108 13-130 537-652 (707)
4 KOG0279|consensus 99.8 2.5E-19 5.4E-24 121.7 12.7 110 17-136 69-189 (315)
5 KOG0272|consensus 99.8 1.9E-20 4.1E-25 132.9 7.6 120 15-142 221-348 (459)
6 KOG0266|consensus 99.8 7.5E-19 1.6E-23 131.2 15.0 120 13-141 205-334 (456)
7 KOG0263|consensus 99.8 1E-19 2.3E-24 136.9 10.0 117 17-144 499-623 (707)
8 PTZ00421 coronin; Provisional 99.8 2.5E-18 5.5E-23 128.9 17.0 116 14-136 78-207 (493)
9 KOG0279|consensus 99.8 1.7E-18 3.8E-23 117.6 12.5 113 14-135 151-270 (315)
10 KOG0273|consensus 99.8 3.2E-18 7E-23 123.2 12.4 113 14-136 362-491 (524)
11 KOG0286|consensus 99.8 6.9E-18 1.5E-22 115.5 12.8 104 25-136 156-268 (343)
12 KOG0266|consensus 99.8 1E-17 2.2E-22 125.2 14.8 115 14-138 249-375 (456)
13 PTZ00420 coronin; Provisional 99.8 3.3E-17 7.1E-22 124.2 17.3 117 14-137 77-207 (568)
14 KOG0271|consensus 99.8 2.7E-18 5.8E-23 121.2 10.4 102 14-125 370-479 (480)
15 KOG0285|consensus 99.8 1E-17 2.3E-22 117.5 12.0 116 14-139 154-277 (460)
16 KOG0315|consensus 99.8 3.6E-17 7.8E-22 110.0 12.7 106 15-129 44-156 (311)
17 KOG0277|consensus 99.8 2.1E-17 4.6E-22 111.3 11.5 130 9-147 100-241 (311)
18 KOG0284|consensus 99.8 5.1E-18 1.1E-22 120.4 8.7 113 13-135 182-302 (464)
19 KOG0302|consensus 99.7 4.5E-17 9.8E-22 114.8 11.2 109 14-129 260-380 (440)
20 KOG0286|consensus 99.7 1.9E-16 4.2E-21 108.5 12.9 109 16-133 191-309 (343)
21 KOG0269|consensus 99.7 7E-17 1.5E-21 122.1 11.3 109 14-131 136-254 (839)
22 KOG0319|consensus 99.7 1E-16 2.2E-21 120.6 11.4 114 13-136 465-586 (775)
23 KOG0295|consensus 99.7 3.1E-16 6.8E-21 110.0 13.0 115 12-136 194-373 (406)
24 KOG0284|consensus 99.7 7.2E-17 1.6E-21 114.6 9.7 115 9-133 218-343 (464)
25 KOG0283|consensus 99.7 1E-16 2.3E-21 121.6 10.9 102 25-135 380-489 (712)
26 KOG0291|consensus 99.7 5.1E-16 1.1E-20 117.4 14.0 121 14-143 353-482 (893)
27 KOG0291|consensus 99.7 2.8E-16 6.1E-21 118.8 12.6 112 15-136 439-559 (893)
28 KOG0315|consensus 99.7 7.6E-16 1.7E-20 103.7 12.9 121 15-143 171-304 (311)
29 KOG1446|consensus 99.7 1.8E-15 4E-20 104.3 15.1 125 5-137 134-272 (311)
30 KOG0277|consensus 99.7 2.8E-16 6.1E-21 106.0 10.8 114 13-134 62-185 (311)
31 PTZ00421 coronin; Provisional 99.7 1.6E-15 3.4E-20 114.1 16.0 112 15-131 129-249 (493)
32 KOG0282|consensus 99.7 1.8E-17 3.8E-22 119.6 5.2 118 15-140 218-343 (503)
33 KOG0275|consensus 99.7 4.4E-17 9.5E-22 113.5 6.4 107 14-130 266-381 (508)
34 KOG0316|consensus 99.7 1.2E-15 2.5E-20 102.2 11.5 107 14-130 20-134 (307)
35 KOG0316|consensus 99.7 9.3E-16 2E-20 102.6 10.8 122 8-137 54-223 (307)
36 KOG0647|consensus 99.7 1.3E-15 2.7E-20 104.9 11.4 112 14-133 30-151 (347)
37 PLN00181 protein SPA1-RELATED; 99.7 4.8E-15 1E-19 117.5 16.1 107 15-130 536-651 (793)
38 KOG0264|consensus 99.7 9E-16 1.9E-20 109.9 10.7 111 14-131 230-351 (422)
39 KOG0640|consensus 99.7 1.3E-15 2.8E-20 105.5 11.1 110 15-132 116-251 (430)
40 KOG0772|consensus 99.7 2.7E-16 5.8E-21 114.7 7.9 112 14-133 271-400 (641)
41 KOG0645|consensus 99.7 8.9E-15 1.9E-19 99.5 14.4 119 5-130 4-138 (312)
42 KOG0645|consensus 99.7 5.7E-15 1.2E-19 100.4 13.3 106 14-127 64-180 (312)
43 KOG0640|consensus 99.7 2.2E-15 4.7E-20 104.4 11.3 120 7-136 212-344 (430)
44 KOG0285|consensus 99.7 1.2E-15 2.7E-20 107.2 10.2 108 15-132 197-312 (460)
45 KOG0295|consensus 99.7 3E-15 6.5E-20 105.2 11.6 94 25-126 304-405 (406)
46 KOG0273|consensus 99.7 4E-15 8.6E-20 107.5 12.5 113 13-136 237-398 (524)
47 KOG0318|consensus 99.6 7.3E-15 1.6E-19 107.4 13.8 118 14-139 446-572 (603)
48 KOG1273|consensus 99.6 3.2E-15 6.9E-20 103.7 11.3 98 4-105 16-120 (405)
49 KOG0318|consensus 99.6 1.6E-14 3.4E-19 105.7 14.8 109 15-133 194-356 (603)
50 KOG0283|consensus 99.6 1.2E-15 2.6E-20 116.0 9.0 106 16-130 272-443 (712)
51 KOG0289|consensus 99.6 1.1E-14 2.5E-19 104.3 13.1 111 16-134 306-426 (506)
52 KOG0296|consensus 99.6 1.7E-14 3.7E-19 101.4 13.7 109 15-131 66-182 (399)
53 KOG0289|consensus 99.6 8.1E-15 1.8E-19 105.1 11.9 102 14-125 350-460 (506)
54 KOG0276|consensus 99.6 6.6E-15 1.4E-19 109.7 11.6 108 15-131 144-261 (794)
55 KOG1446|consensus 99.6 2.4E-14 5.2E-19 98.9 13.3 108 14-129 17-172 (311)
56 PTZ00420 coronin; Provisional 99.6 3.9E-14 8.5E-19 107.6 15.6 111 14-130 128-251 (568)
57 KOG0772|consensus 99.6 3.2E-15 7E-20 109.2 8.9 118 14-133 320-451 (641)
58 KOG0281|consensus 99.6 3.3E-15 7.2E-20 104.9 8.2 95 25-131 330-432 (499)
59 KOG0292|consensus 99.6 7.5E-15 1.6E-19 113.0 10.5 107 14-130 54-168 (1202)
60 KOG0319|consensus 99.6 2.5E-14 5.4E-19 108.0 12.4 105 14-128 508-620 (775)
61 KOG0310|consensus 99.6 4.1E-14 8.8E-19 102.5 12.9 106 16-131 115-229 (487)
62 KOG0265|consensus 99.6 3.9E-14 8.4E-19 97.5 11.7 111 21-139 98-216 (338)
63 KOG0643|consensus 99.6 5.5E-14 1.2E-18 95.6 12.1 120 10-135 47-228 (327)
64 KOG0265|consensus 99.6 5.6E-14 1.2E-18 96.7 12.2 115 14-137 50-173 (338)
65 KOG1407|consensus 99.6 2.8E-14 6.1E-19 96.7 10.3 66 48-113 180-253 (313)
66 KOG0269|consensus 99.6 1.5E-14 3.2E-19 109.7 9.5 115 13-133 178-302 (839)
67 KOG1539|consensus 99.6 1.1E-14 2.3E-19 111.2 8.8 105 14-127 537-648 (910)
68 cd00200 WD40 WD40 domain, foun 99.6 3.5E-13 7.6E-18 92.8 15.7 111 14-134 12-130 (289)
69 KOG0293|consensus 99.6 4.6E-14 1E-18 100.9 11.2 103 17-127 230-342 (519)
70 KOG0303|consensus 99.6 2.9E-14 6.4E-19 101.3 10.0 114 16-136 86-212 (472)
71 KOG0264|consensus 99.6 4.1E-14 8.8E-19 101.5 10.5 125 15-146 181-322 (422)
72 cd00200 WD40 WD40 domain, foun 99.6 4.4E-13 9.5E-18 92.3 15.0 112 14-135 96-215 (289)
73 KOG1445|consensus 99.6 1.5E-14 3.3E-19 108.3 8.1 112 13-131 629-754 (1012)
74 KOG0313|consensus 99.6 9.6E-14 2.1E-18 98.2 11.2 105 15-131 264-380 (423)
75 KOG0643|consensus 99.5 2.8E-13 6E-18 92.3 12.6 71 15-89 14-84 (327)
76 KOG0296|consensus 99.5 3.5E-13 7.5E-18 94.9 13.4 112 14-135 109-228 (399)
77 KOG0276|consensus 99.5 1.2E-13 2.7E-18 103.1 11.7 113 15-137 59-181 (794)
78 KOG0305|consensus 99.5 1.5E-13 3.3E-18 101.7 11.9 122 9-136 297-428 (484)
79 KOG0267|consensus 99.5 1E-14 2.2E-19 110.0 5.5 110 14-133 73-190 (825)
80 KOG1407|consensus 99.5 1.8E-13 3.9E-18 92.8 10.6 108 16-127 194-311 (313)
81 KOG0282|consensus 99.5 1.3E-13 2.9E-18 99.8 10.5 107 15-132 262-377 (503)
82 KOG0639|consensus 99.5 3.5E-14 7.6E-19 103.8 7.5 110 13-130 509-625 (705)
83 KOG0275|consensus 99.5 1.9E-14 4.1E-19 100.5 5.8 110 14-131 216-340 (508)
84 KOG0973|consensus 99.5 2.2E-13 4.8E-18 106.3 11.9 107 14-128 72-202 (942)
85 PF08662 eIF2A: Eukaryotic tra 99.5 1E-12 2.2E-17 88.0 13.7 107 14-127 62-179 (194)
86 KOG0270|consensus 99.5 2.9E-13 6.2E-18 97.3 11.5 106 16-130 248-363 (463)
87 KOG0281|consensus 99.5 8.9E-14 1.9E-18 97.8 8.7 99 25-135 247-356 (499)
88 KOG0294|consensus 99.5 2.8E-13 6.1E-18 93.9 10.9 105 16-130 46-160 (362)
89 KOG0310|consensus 99.5 1.3E-13 2.8E-18 99.9 8.8 106 17-130 72-187 (487)
90 KOG0305|consensus 99.5 4.1E-13 8.8E-18 99.4 11.5 112 13-136 219-340 (484)
91 KOG1063|consensus 99.5 4.3E-13 9.3E-18 100.9 11.5 109 13-129 525-650 (764)
92 KOG1274|consensus 99.5 1E-12 2.3E-17 101.4 13.4 105 14-128 99-263 (933)
93 PLN00181 protein SPA1-RELATED; 99.5 2.9E-12 6.4E-17 101.8 16.4 107 15-130 621-741 (793)
94 KOG4283|consensus 99.5 2.8E-13 6E-18 93.5 9.1 98 25-130 158-279 (397)
95 KOG1034|consensus 99.5 2.2E-13 4.8E-18 95.0 8.7 103 20-130 100-214 (385)
96 KOG1332|consensus 99.5 4.7E-13 1E-17 90.1 9.9 103 21-129 19-136 (299)
97 KOG2110|consensus 99.5 2.5E-12 5.4E-17 90.8 13.1 107 15-129 131-250 (391)
98 KOG0313|consensus 99.5 1.1E-12 2.5E-17 92.8 11.4 104 20-130 200-333 (423)
99 KOG1007|consensus 99.5 5.4E-13 1.2E-17 91.8 9.3 104 15-127 174-289 (370)
100 KOG0300|consensus 99.5 4.1E-13 9E-18 93.6 8.8 114 9-131 266-390 (481)
101 KOG0268|consensus 99.5 1.3E-13 2.9E-18 97.1 6.5 105 14-127 232-345 (433)
102 KOG0278|consensus 99.5 2.1E-13 4.7E-18 92.2 7.2 109 15-133 104-219 (334)
103 KOG4378|consensus 99.5 7.4E-13 1.6E-17 96.8 10.4 123 16-147 169-300 (673)
104 KOG0308|consensus 99.5 1.3E-12 2.9E-17 97.8 11.9 108 15-130 173-288 (735)
105 KOG0294|consensus 99.5 1.6E-12 3.4E-17 90.3 11.5 105 14-127 86-197 (362)
106 KOG0771|consensus 99.5 1E-12 2.3E-17 93.8 10.1 121 14-145 147-329 (398)
107 KOG1188|consensus 99.4 1.3E-12 2.7E-17 91.5 10.1 119 26-148 41-173 (376)
108 KOG0641|consensus 99.4 3.9E-12 8.5E-17 85.2 11.9 105 13-127 184-303 (350)
109 KOG0308|consensus 99.4 1.9E-12 4E-17 97.1 11.3 112 15-134 121-250 (735)
110 KOG0306|consensus 99.4 1.3E-12 2.8E-17 99.3 10.0 106 15-128 552-665 (888)
111 KOG1445|consensus 99.4 4.3E-13 9.3E-18 100.7 7.2 119 6-129 670-800 (1012)
112 KOG0292|consensus 99.4 1.3E-12 2.8E-17 101.0 9.7 111 14-134 12-130 (1202)
113 KOG0302|consensus 99.4 9E-13 2E-17 93.4 8.2 125 15-146 215-353 (440)
114 KOG0303|consensus 99.4 1.8E-12 3.9E-17 92.4 9.2 114 15-135 135-257 (472)
115 KOG0267|consensus 99.4 5.5E-13 1.2E-17 100.9 6.8 109 15-133 116-232 (825)
116 KOG0641|consensus 99.4 1.2E-11 2.5E-16 83.0 12.3 104 14-127 234-349 (350)
117 KOG0278|consensus 99.4 7.6E-12 1.6E-16 84.8 11.1 97 25-131 196-301 (334)
118 KOG0306|consensus 99.4 8.6E-12 1.9E-16 94.9 12.6 113 14-136 511-631 (888)
119 KOG0288|consensus 99.4 7.7E-12 1.7E-16 89.5 11.5 102 26-136 313-426 (459)
120 KOG4283|consensus 99.4 4.8E-12 1E-16 87.5 10.1 109 14-129 46-221 (397)
121 KOG0973|consensus 99.4 3E-12 6.4E-17 100.1 10.1 106 14-125 132-251 (942)
122 KOG0639|consensus 99.4 1.4E-12 3E-17 95.6 7.7 112 15-134 469-588 (705)
123 KOG1036|consensus 99.4 1.5E-11 3.3E-16 85.1 11.8 104 13-128 15-125 (323)
124 KOG0274|consensus 99.4 9.6E-12 2.1E-16 94.3 11.9 102 24-137 260-369 (537)
125 KOG2394|consensus 99.4 2.4E-12 5.3E-17 94.7 8.2 85 13-101 292-384 (636)
126 KOG0646|consensus 99.4 1.7E-11 3.6E-16 88.8 12.2 117 12-136 124-316 (476)
127 KOG0274|consensus 99.4 2E-11 4.3E-16 92.7 12.9 100 25-135 301-409 (537)
128 KOG2394|consensus 99.4 2.2E-11 4.8E-16 89.8 12.2 112 14-132 222-367 (636)
129 KOG1332|consensus 99.4 1.3E-11 2.8E-16 83.3 9.9 108 16-129 61-195 (299)
130 KOG2055|consensus 99.3 4.1E-11 9E-16 86.9 12.9 78 8-89 340-419 (514)
131 KOG0642|consensus 99.3 1E-11 2.2E-16 91.8 9.9 111 13-131 296-430 (577)
132 KOG0649|consensus 99.3 4.9E-11 1.1E-15 80.6 11.9 111 9-132 112-240 (325)
133 KOG0268|consensus 99.3 3.9E-12 8.5E-17 89.8 6.8 111 11-131 187-306 (433)
134 KOG0647|consensus 99.3 4.2E-11 9.2E-16 82.9 11.5 103 15-130 76-187 (347)
135 KOG1036|consensus 99.3 1.1E-10 2.5E-15 80.8 13.5 104 15-132 58-168 (323)
136 KOG0321|consensus 99.3 1.3E-11 2.8E-16 92.5 9.2 107 15-131 104-252 (720)
137 KOG0293|consensus 99.3 2.7E-11 5.8E-16 87.0 9.9 106 14-129 272-386 (519)
138 KOG2096|consensus 99.3 5.4E-11 1.2E-15 83.1 11.1 100 19-127 193-308 (420)
139 KOG1188|consensus 99.3 6.9E-11 1.5E-15 83.0 11.5 110 15-130 74-199 (376)
140 KOG0322|consensus 99.3 4.1E-11 9E-16 81.7 10.1 63 58-126 252-322 (323)
141 KOG1009|consensus 99.3 7E-11 1.5E-15 84.5 11.2 110 16-132 18-158 (434)
142 KOG0290|consensus 99.3 9.7E-11 2.1E-15 80.9 11.4 111 14-130 151-321 (364)
143 KOG0646|consensus 99.3 6.4E-11 1.4E-15 85.8 10.5 102 23-132 91-211 (476)
144 KOG1034|consensus 99.3 4.7E-11 1E-15 83.5 9.2 70 15-87 139-211 (385)
145 KOG4328|consensus 99.3 7.2E-11 1.6E-15 85.5 10.3 112 14-131 189-357 (498)
146 KOG2048|consensus 99.3 2.5E-10 5.5E-15 86.0 13.5 109 14-133 72-190 (691)
147 KOG0288|consensus 99.3 6.6E-11 1.4E-15 84.8 10.0 100 17-124 345-458 (459)
148 KOG2111|consensus 99.3 3.4E-10 7.3E-15 78.9 12.8 109 16-130 139-259 (346)
149 TIGR03866 PQQ_ABC_repeats PQQ- 99.3 3.6E-10 7.9E-15 79.4 13.3 99 26-133 2-109 (300)
150 KOG4378|consensus 99.2 1.9E-11 4.1E-16 89.6 6.7 112 20-139 86-207 (673)
151 TIGR03866 PQQ_ABC_repeats PQQ- 99.2 6E-10 1.3E-14 78.3 14.2 114 14-137 159-289 (300)
152 KOG0299|consensus 99.2 1.1E-10 2.4E-15 84.5 10.4 105 15-129 206-318 (479)
153 KOG1539|consensus 99.2 4E-10 8.6E-15 86.8 13.5 120 8-135 154-283 (910)
154 KOG0307|consensus 99.2 1.6E-11 3.5E-16 96.7 6.2 115 15-135 68-200 (1049)
155 KOG1408|consensus 99.2 3.2E-10 7E-15 86.5 12.2 100 21-128 604-714 (1080)
156 KOG2445|consensus 99.2 7.1E-10 1.5E-14 77.1 12.8 110 14-131 16-148 (361)
157 KOG0301|consensus 99.2 1.8E-10 4E-15 87.1 10.3 107 10-127 135-249 (745)
158 KOG1009|consensus 99.2 5.3E-11 1.2E-15 85.1 7.1 98 14-113 68-187 (434)
159 KOG2919|consensus 99.2 4.7E-10 1E-14 78.6 11.5 109 14-131 210-331 (406)
160 KOG1310|consensus 99.2 2.4E-10 5.3E-15 84.9 10.3 107 14-130 53-181 (758)
161 KOG0299|consensus 99.2 2.1E-10 4.4E-15 83.2 9.7 110 15-132 146-279 (479)
162 PF08662 eIF2A: Eukaryotic tra 99.2 2.8E-09 6.1E-14 71.5 14.5 115 15-135 9-141 (194)
163 KOG1273|consensus 99.2 1.2E-10 2.5E-15 81.4 7.9 68 60-133 26-101 (405)
164 KOG2096|consensus 99.2 5.7E-10 1.2E-14 78.1 10.4 119 15-142 232-375 (420)
165 KOG2919|consensus 99.2 4E-10 8.6E-15 79.0 9.4 126 12-145 159-300 (406)
166 KOG0300|consensus 99.2 1.3E-10 2.8E-15 81.4 6.8 116 13-136 146-311 (481)
167 KOG1007|consensus 99.2 8.4E-10 1.8E-14 76.3 10.6 109 14-133 126-251 (370)
168 KOG0644|consensus 99.1 5.8E-11 1.2E-15 91.6 4.7 99 15-127 194-300 (1113)
169 KOG0301|consensus 99.1 1.4E-09 3E-14 82.5 11.7 93 26-128 191-289 (745)
170 KOG1408|consensus 99.1 6.4E-10 1.4E-14 85.0 9.7 105 15-130 82-197 (1080)
171 KOG2055|consensus 99.1 3.6E-09 7.7E-14 77.1 12.7 113 13-133 215-380 (514)
172 KOG0307|consensus 99.1 2.5E-10 5.5E-15 90.1 7.2 109 15-130 210-330 (1049)
173 KOG3881|consensus 99.1 2.5E-09 5.5E-14 76.3 11.5 105 21-132 212-325 (412)
174 KOG0270|consensus 99.1 4.3E-09 9.2E-14 76.2 11.6 116 10-133 327-455 (463)
175 KOG1538|consensus 99.1 2.9E-09 6.3E-14 81.0 11.1 97 12-113 13-154 (1081)
176 KOG0650|consensus 99.1 1E-08 2.2E-13 77.0 13.7 119 5-129 392-556 (733)
177 KOG2445|consensus 99.1 7.8E-09 1.7E-13 72.1 12.2 113 14-127 62-207 (361)
178 KOG2048|consensus 99.1 5.1E-09 1.1E-13 79.2 12.1 106 21-133 118-239 (691)
179 KOG1272|consensus 99.0 5.8E-10 1.3E-14 81.2 6.5 110 17-136 215-332 (545)
180 KOG2139|consensus 99.0 8.8E-09 1.9E-13 73.3 12.2 103 5-111 186-300 (445)
181 KOG2106|consensus 99.0 1.5E-08 3.2E-13 74.8 13.7 101 14-126 410-520 (626)
182 KOG0321|consensus 99.0 1.1E-09 2.3E-14 82.4 7.9 109 16-130 54-178 (720)
183 KOG1274|consensus 99.0 9.5E-09 2.1E-13 80.1 13.1 112 13-134 56-175 (933)
184 KOG4328|consensus 99.0 2.3E-09 4.9E-14 77.9 8.6 97 24-127 290-399 (498)
185 KOG2106|consensus 99.0 1.2E-08 2.6E-13 75.3 11.5 100 16-129 373-479 (626)
186 KOG4227|consensus 99.0 1E-08 2.2E-13 73.8 10.7 109 14-130 59-182 (609)
187 KOG1523|consensus 99.0 1.2E-08 2.6E-13 71.4 10.7 106 14-127 13-130 (361)
188 KOG0290|consensus 99.0 1.5E-08 3.3E-13 70.2 10.8 97 14-111 199-356 (364)
189 PF00400 WD40: WD domain, G-be 99.0 4.4E-09 9.5E-14 52.0 6.0 38 48-85 2-39 (39)
190 KOG0322|consensus 98.9 1.8E-09 3.8E-14 73.9 5.5 70 13-86 253-322 (323)
191 KOG0974|consensus 98.9 1.1E-08 2.3E-13 80.6 10.3 108 12-129 172-290 (967)
192 KOG1963|consensus 98.9 3.3E-08 7.2E-13 76.6 12.7 117 14-138 208-333 (792)
193 KOG2111|consensus 98.9 1.7E-08 3.7E-13 70.6 10.0 79 8-88 176-257 (346)
194 PF02239 Cytochrom_D1: Cytochr 98.9 5E-08 1.1E-12 71.5 13.0 104 25-135 5-116 (369)
195 KOG1063|consensus 98.9 2.6E-08 5.6E-13 75.8 11.3 106 14-127 575-699 (764)
196 KOG1272|consensus 98.9 4.5E-09 9.8E-14 76.7 6.7 96 20-125 258-360 (545)
197 KOG2110|consensus 98.9 2.3E-07 5.1E-12 66.1 14.0 72 14-89 176-250 (391)
198 KOG0649|consensus 98.8 3.7E-08 8.1E-13 66.9 8.8 117 14-137 61-196 (325)
199 KOG1240|consensus 98.8 1.4E-07 3.1E-12 75.9 13.3 108 25-138 1061-1236(1431)
200 KOG0280|consensus 98.8 2E-08 4.3E-13 69.7 7.2 92 10-102 160-264 (339)
201 KOG1517|consensus 98.8 9.7E-08 2.1E-12 76.0 11.7 112 25-143 1221-1351(1387)
202 KOG0974|consensus 98.8 2E-07 4.4E-12 73.6 13.3 93 25-127 145-246 (967)
203 PRK11028 6-phosphogluconolacto 98.8 3E-07 6.4E-12 66.3 13.4 109 13-128 176-305 (330)
204 COG2319 FOG: WD40 repeat [Gene 98.8 3.4E-07 7.3E-12 65.9 13.7 107 15-131 159-275 (466)
205 KOG1587|consensus 98.8 5.5E-08 1.2E-12 74.1 9.6 104 14-127 401-516 (555)
206 KOG4227|consensus 98.8 1E-07 2.3E-12 68.8 10.4 108 13-131 107-229 (609)
207 KOG2321|consensus 98.8 1.3E-07 2.9E-12 70.9 11.2 111 15-135 137-266 (703)
208 KOG1524|consensus 98.8 1.2E-07 2.6E-12 70.7 10.9 96 13-113 147-278 (737)
209 KOG1523|consensus 98.8 6.8E-08 1.5E-12 67.8 9.0 97 15-113 59-168 (361)
210 KOG1310|consensus 98.8 2.9E-08 6.3E-13 74.1 7.2 109 13-127 95-231 (758)
211 KOG1517|consensus 98.8 1.3E-07 2.8E-12 75.3 11.1 117 5-129 1157-1289(1387)
212 KOG2315|consensus 98.8 4E-07 8.6E-12 68.0 12.9 109 14-127 273-390 (566)
213 PRK05137 tolB translocation pr 98.8 7.2E-07 1.6E-11 66.8 14.6 108 14-129 204-324 (435)
214 PF11768 DUF3312: Protein of u 98.8 1.1E-06 2.4E-11 66.1 15.1 111 10-127 204-329 (545)
215 PRK01742 tolB translocation pr 98.7 5.4E-07 1.2E-11 67.4 13.3 92 15-111 207-311 (429)
216 KOG2321|consensus 98.7 1.1E-07 2.4E-12 71.3 9.0 110 15-135 179-310 (703)
217 COG2319 FOG: WD40 repeat [Gene 98.7 1.2E-06 2.7E-11 63.0 14.2 99 27-133 125-235 (466)
218 PRK11028 6-phosphogluconolacto 98.7 1.6E-06 3.5E-11 62.5 14.4 107 14-128 82-206 (330)
219 KOG0280|consensus 98.7 5E-07 1.1E-11 62.9 10.4 110 16-131 124-245 (339)
220 KOG0642|consensus 98.7 6.2E-07 1.3E-11 67.0 11.4 112 15-132 346-524 (577)
221 PRK03629 tolB translocation pr 98.7 2.3E-06 5E-11 64.1 14.7 107 15-129 202-321 (429)
222 KOG1524|consensus 98.6 1E-07 2.2E-12 71.1 6.5 94 25-127 75-216 (737)
223 PRK03629 tolB translocation pr 98.6 3.2E-06 6.9E-11 63.3 14.6 108 15-130 246-366 (429)
224 PRK01742 tolB translocation pr 98.6 6.7E-07 1.5E-11 66.9 10.7 89 34-129 183-282 (429)
225 PRK04922 tolB translocation pr 98.6 2.3E-06 5E-11 64.1 13.4 107 15-129 207-326 (433)
226 KOG0771|consensus 98.6 6.3E-07 1.4E-11 64.7 9.3 105 14-127 189-354 (398)
227 PRK02889 tolB translocation pr 98.6 2.7E-06 5.9E-11 63.6 13.0 106 15-128 199-317 (427)
228 KOG3914|consensus 98.6 7.6E-07 1.7E-11 64.0 9.2 88 36-133 133-229 (390)
229 KOG0650|consensus 98.6 2.7E-07 5.9E-12 69.5 7.2 95 14-113 569-672 (733)
230 PRK04922 tolB translocation pr 98.6 5.3E-06 1.2E-10 62.2 14.0 107 16-130 252-371 (433)
231 PF02239 Cytochrom_D1: Cytochr 98.5 1.6E-05 3.4E-10 58.5 15.4 107 14-130 39-161 (369)
232 TIGR02800 propeller_TolB tol-p 98.5 7.5E-06 1.6E-10 60.8 13.9 107 16-130 194-313 (417)
233 KOG2139|consensus 98.5 2.1E-06 4.5E-11 61.5 9.9 108 14-132 101-231 (445)
234 PRK00178 tolB translocation pr 98.5 1.1E-05 2.4E-10 60.4 14.4 108 15-130 202-322 (430)
235 PRK02889 tolB translocation pr 98.5 5.8E-06 1.3E-10 61.9 12.9 108 15-130 243-363 (427)
236 KOG4547|consensus 98.5 4.3E-06 9.2E-11 62.8 11.9 109 24-142 69-187 (541)
237 PRK05137 tolB translocation pr 98.5 8.2E-06 1.8E-10 61.2 13.5 89 35-130 182-281 (435)
238 COG4946 Uncharacterized protei 98.5 8.2E-06 1.8E-10 60.5 12.9 99 25-128 371-478 (668)
239 KOG4532|consensus 98.5 4.7E-06 1E-10 57.7 10.9 107 25-142 129-248 (344)
240 KOG3881|consensus 98.5 4.9E-06 1.1E-10 59.9 11.1 105 21-133 157-283 (412)
241 PRK04792 tolB translocation pr 98.4 1.4E-05 3.1E-10 60.2 13.9 107 16-130 222-341 (448)
242 PF11768 DUF3312: Protein of u 98.4 2E-06 4.4E-11 64.8 8.9 69 14-88 262-330 (545)
243 KOG1409|consensus 98.4 2.8E-06 6.1E-11 60.4 8.7 84 3-89 185-272 (404)
244 KOG1587|consensus 98.4 6.8E-06 1.5E-10 63.0 11.3 90 35-132 222-328 (555)
245 KOG1963|consensus 98.4 7.1E-06 1.5E-10 64.1 11.1 107 14-130 163-284 (792)
246 PRK01029 tolB translocation pr 98.4 2.5E-05 5.5E-10 58.6 13.6 110 15-130 284-406 (428)
247 KOG1064|consensus 98.3 3.9E-06 8.4E-11 70.4 8.7 115 15-137 2210-2376(2439)
248 KOG4714|consensus 98.3 2.9E-06 6.3E-11 58.4 6.6 72 16-89 184-256 (319)
249 KOG4497|consensus 98.3 1.4E-05 3.1E-10 56.8 10.0 94 17-113 54-155 (447)
250 PRK01029 tolB translocation pr 98.3 4E-05 8.8E-10 57.5 13.1 112 15-131 234-363 (428)
251 TIGR02800 propeller_TolB tol-p 98.3 4.9E-05 1.1E-09 56.5 13.3 107 15-129 237-356 (417)
252 KOG4497|consensus 98.3 1.5E-05 3.2E-10 56.8 9.5 67 58-130 319-394 (447)
253 PRK00178 tolB translocation pr 98.3 8.4E-05 1.8E-09 55.6 14.3 107 16-130 247-366 (430)
254 PRK04792 tolB translocation pr 98.2 8.9E-05 1.9E-09 56.0 14.1 108 15-130 265-385 (448)
255 KOG2695|consensus 98.2 1.1E-06 2.5E-11 62.5 3.7 115 15-140 215-345 (425)
256 PLN02919 haloacid dehalogenase 98.2 0.00012 2.6E-09 60.6 15.1 109 13-131 741-892 (1057)
257 PF00400 WD40: WD domain, G-be 98.2 4.9E-06 1.1E-10 40.7 4.6 28 92-125 12-39 (39)
258 KOG2695|consensus 98.2 1.5E-05 3.2E-10 56.9 8.2 100 25-131 264-380 (425)
259 KOG1354|consensus 98.2 1.4E-05 3.1E-10 57.1 8.0 106 20-133 171-308 (433)
260 KOG4714|consensus 98.2 8.2E-06 1.8E-10 56.2 6.3 64 58-127 180-254 (319)
261 PF15492 Nbas_N: Neuroblastoma 98.2 0.0004 8.6E-09 48.5 14.4 81 57-143 147-275 (282)
262 PF10282 Lactonase: Lactonase, 98.1 0.00021 4.5E-09 52.1 13.7 109 12-127 192-322 (345)
263 KOG2066|consensus 98.1 0.00011 2.3E-09 57.7 12.0 99 23-134 81-194 (846)
264 KOG4640|consensus 98.1 4E-05 8.6E-10 58.5 8.8 82 14-100 23-114 (665)
265 KOG1538|consensus 98.0 0.00018 4E-09 55.7 12.1 103 15-127 136-293 (1081)
266 KOG0644|consensus 98.0 3.1E-06 6.7E-11 66.3 2.6 61 21-87 240-300 (1113)
267 PRK04043 tolB translocation pr 98.0 0.00091 2E-08 50.2 15.6 111 15-131 191-313 (419)
268 TIGR02658 TTQ_MADH_Hv methylam 98.0 0.00046 9.9E-09 50.4 13.3 92 35-134 27-143 (352)
269 KOG1240|consensus 98.0 2.9E-05 6.2E-10 63.2 7.6 80 40-128 1034-1129(1431)
270 PF10282 Lactonase: Lactonase, 98.0 0.0005 1.1E-08 50.2 13.6 114 10-130 35-177 (345)
271 smart00320 WD40 WD40 repeats. 98.0 2.9E-05 6.2E-10 36.5 5.0 38 48-85 3-40 (40)
272 KOG4547|consensus 98.0 0.00021 4.5E-09 54.0 10.8 82 25-110 114-208 (541)
273 KOG1409|consensus 97.9 9.3E-05 2E-09 52.9 8.4 75 48-128 188-271 (404)
274 KOG4190|consensus 97.9 4.5E-05 9.7E-10 57.9 7.2 63 25-89 747-814 (1034)
275 KOG1912|consensus 97.9 0.00015 3.3E-09 56.9 10.0 118 5-133 9-149 (1062)
276 COG5354 Uncharacterized protei 97.9 0.00019 4.1E-09 53.7 10.1 112 14-130 277-398 (561)
277 COG5170 CDC55 Serine/threonine 97.9 8.9E-05 1.9E-09 52.6 7.9 104 21-132 180-314 (460)
278 KOG1275|consensus 97.9 0.00016 3.6E-09 57.5 9.5 93 25-127 187-342 (1118)
279 COG4946 Uncharacterized protei 97.9 0.00077 1.7E-08 50.5 12.2 92 15-110 405-507 (668)
280 TIGR02658 TTQ_MADH_Hv methylam 97.8 0.0017 3.7E-08 47.5 13.8 105 25-135 206-338 (352)
281 KOG1064|consensus 97.8 2.7E-05 5.8E-10 65.7 5.0 102 25-136 2302-2407(2439)
282 KOG1334|consensus 97.8 0.00013 2.7E-09 54.4 7.9 109 13-129 338-468 (559)
283 KOG3914|consensus 97.8 8.1E-05 1.8E-09 53.9 6.7 70 15-89 155-225 (390)
284 KOG1645|consensus 97.8 8.7E-05 1.9E-09 54.1 6.9 87 37-131 175-270 (463)
285 KOG4532|consensus 97.8 0.0021 4.5E-08 44.9 13.2 110 14-131 161-286 (344)
286 KOG3621|consensus 97.8 0.00023 5E-09 55.1 8.6 102 17-128 39-155 (726)
287 KOG2315|consensus 97.8 0.002 4.3E-08 48.8 13.2 113 14-132 220-349 (566)
288 PLN02919 haloacid dehalogenase 97.7 0.0023 5E-08 53.3 14.6 107 13-129 684-835 (1057)
289 KOG2041|consensus 97.7 0.00075 1.6E-08 52.9 10.7 97 15-113 18-137 (1189)
290 KOG1354|consensus 97.7 0.00027 5.9E-09 50.7 7.6 107 15-128 88-245 (433)
291 KOG0309|consensus 97.7 0.00015 3.3E-09 56.7 6.2 100 24-130 126-235 (1081)
292 KOG1334|consensus 97.6 0.00022 4.7E-09 53.2 6.6 107 15-131 146-267 (559)
293 COG2706 3-carboxymuconate cycl 97.6 0.007 1.5E-07 43.7 13.7 114 10-130 38-178 (346)
294 COG2706 3-carboxymuconate cycl 97.6 0.014 3.1E-07 42.1 14.5 108 12-127 191-321 (346)
295 KOG0309|consensus 97.5 0.00048 1E-08 54.1 7.1 111 15-132 71-193 (1081)
296 KOG1275|consensus 97.5 0.00079 1.7E-08 53.9 8.2 118 25-146 147-273 (1118)
297 PRK04043 tolB translocation pr 97.5 0.011 2.3E-07 44.5 13.6 105 15-129 280-402 (419)
298 KOG1912|consensus 97.4 0.00073 1.6E-08 53.3 7.3 96 26-129 438-553 (1062)
299 PF04762 IKI3: IKI3 family; I 97.4 0.0024 5.3E-08 52.4 10.5 104 15-128 211-334 (928)
300 PF08450 SGL: SMP-30/Gluconola 97.4 0.019 4.2E-07 39.7 14.2 112 10-129 38-166 (246)
301 KOG1832|consensus 97.4 0.00023 5E-09 56.9 4.4 111 14-134 1104-1221(1516)
302 KOG2314|consensus 97.4 0.002 4.4E-08 49.0 9.0 112 14-131 252-385 (698)
303 KOG4640|consensus 97.4 0.0015 3.2E-08 50.3 8.4 72 57-134 20-99 (665)
304 KOG1645|consensus 97.3 0.002 4.3E-08 47.2 8.3 72 14-89 196-268 (463)
305 KOG2314|consensus 97.3 0.0038 8.2E-08 47.7 9.3 92 15-113 214-327 (698)
306 PRK02888 nitrous-oxide reducta 97.2 0.023 5E-07 44.5 13.2 94 25-128 288-405 (635)
307 PF15492 Nbas_N: Neuroblastoma 97.2 0.021 4.5E-07 40.2 11.8 63 24-87 8-73 (282)
308 PF07433 DUF1513: Protein of u 97.2 0.039 8.5E-07 39.6 13.3 54 17-75 56-116 (305)
309 PF12234 Rav1p_C: RAVE protein 97.2 0.012 2.7E-07 46.1 11.2 95 24-127 40-156 (631)
310 COG5170 CDC55 Serine/threonine 97.1 0.0023 5E-08 45.7 6.6 103 19-129 94-254 (460)
311 COG0823 TolB Periplasmic compo 97.1 0.015 3.2E-07 43.9 11.0 89 36-130 219-317 (425)
312 KOG3617|consensus 97.0 0.0018 4E-08 51.8 5.6 101 15-127 19-131 (1416)
313 KOG0882|consensus 97.0 0.013 2.9E-07 43.8 9.6 99 32-136 119-240 (558)
314 smart00320 WD40 WD40 repeats. 96.9 0.0024 5.2E-08 29.4 3.9 28 92-125 13-40 (40)
315 PF12894 Apc4_WD40: Anaphase-p 96.9 0.0061 1.3E-07 31.2 5.4 31 57-87 11-41 (47)
316 PF04762 IKI3: IKI3 family; I 96.9 0.055 1.2E-06 44.8 13.4 106 14-125 24-148 (928)
317 COG5354 Uncharacterized protei 96.7 0.01 2.2E-07 44.8 7.4 98 15-126 36-159 (561)
318 PF07433 DUF1513: Protein of u 96.6 0.078 1.7E-06 38.1 11.1 93 16-111 9-118 (305)
319 PF08553 VID27: VID27 cytoplas 96.6 0.056 1.2E-06 43.7 11.3 90 29-126 546-646 (794)
320 PF08553 VID27: VID27 cytoplas 96.6 0.012 2.6E-07 47.4 7.4 59 25-86 588-646 (794)
321 KOG1920|consensus 96.6 0.034 7.4E-07 46.2 10.0 106 15-128 199-323 (1265)
322 PF14783 BBS2_Mid: Ciliary BBS 96.5 0.076 1.7E-06 32.3 13.2 87 20-113 11-106 (111)
323 KOG2066|consensus 96.5 0.017 3.6E-07 45.9 7.7 79 25-113 49-139 (846)
324 KOG3617|consensus 96.5 0.0039 8.4E-08 50.0 4.2 69 15-87 63-131 (1416)
325 KOG2114|consensus 96.5 0.057 1.2E-06 43.4 10.4 100 15-125 27-153 (933)
326 PF08450 SGL: SMP-30/Gluconola 96.5 0.16 3.5E-06 35.1 15.0 105 15-127 3-123 (246)
327 KOG1008|consensus 96.5 0.0013 2.7E-08 50.9 1.3 107 10-127 153-275 (783)
328 PRK02888 nitrous-oxide reducta 96.4 0.1 2.2E-06 41.0 11.2 88 35-130 215-354 (635)
329 PF02897 Peptidase_S9_N: Proly 96.4 0.27 5.8E-06 36.8 14.3 106 17-129 129-262 (414)
330 TIGR03300 assembly_YfgL outer 96.4 0.18 3.8E-06 37.2 12.1 94 25-131 65-167 (377)
331 KOG1008|consensus 96.4 0.0013 2.8E-08 50.9 0.8 110 12-127 57-184 (783)
332 KOG4190|consensus 96.3 0.0035 7.6E-08 48.0 2.8 70 50-127 728-812 (1034)
333 PF14761 HPS3_N: Hermansky-Pud 96.1 0.25 5.4E-06 33.7 10.8 50 26-76 29-78 (215)
334 PF15390 DUF4613: Domain of un 96.1 0.1 2.3E-06 40.5 9.7 108 14-127 59-186 (671)
335 KOG2079|consensus 96.1 0.028 6E-07 46.2 7.0 88 25-113 99-197 (1206)
336 KOG2395|consensus 96.0 0.045 9.8E-07 41.9 7.4 59 25-86 441-499 (644)
337 COG0823 TolB Periplasmic compo 96.0 0.1 2.2E-06 39.5 9.2 109 15-130 241-361 (425)
338 TIGR03300 assembly_YfgL outer 96.0 0.3 6.4E-06 36.0 11.5 99 25-135 241-346 (377)
339 KOG3621|consensus 96.0 0.028 6.1E-07 44.1 6.2 64 25-88 88-155 (726)
340 PF12894 Apc4_WD40: Anaphase-p 95.9 0.035 7.6E-07 28.3 4.5 29 92-126 12-40 (47)
341 KOG2444|consensus 95.8 0.055 1.2E-06 37.1 6.4 97 25-128 70-178 (238)
342 PF13360 PQQ_2: PQQ-like domai 95.7 0.21 4.5E-06 34.0 9.2 101 25-135 36-148 (238)
343 PF04053 Coatomer_WDAD: Coatom 95.6 0.32 6.9E-06 37.1 10.6 44 69-113 117-166 (443)
344 KOG0882|consensus 95.6 0.24 5.2E-06 37.4 9.5 101 25-132 156-310 (558)
345 KOG1920|consensus 95.4 0.94 2E-05 38.3 13.0 67 15-84 70-136 (1265)
346 PF00930 DPPIV_N: Dipeptidyl p 95.3 0.081 1.7E-06 38.8 6.5 75 35-113 23-122 (353)
347 KOG2041|consensus 95.2 0.05 1.1E-06 43.3 5.2 99 21-127 79-186 (1189)
348 PF06433 Me-amine-dh_H: Methyl 95.2 0.36 7.8E-06 35.3 9.1 89 35-131 17-130 (342)
349 PF10168 Nup88: Nuclear pore c 95.1 1.5 3.2E-05 35.6 13.5 70 58-133 85-185 (717)
350 COG3490 Uncharacterized protei 95.1 0.71 1.5E-05 33.1 10.0 93 16-111 72-181 (366)
351 PF07569 Hira: TUP1-like enhan 95.0 0.49 1.1E-05 32.5 9.1 70 15-89 14-97 (219)
352 PF14783 BBS2_Mid: Ciliary BBS 94.9 0.45 9.8E-06 29.0 8.6 71 60-131 2-82 (111)
353 KOG4649|consensus 94.8 0.99 2.1E-05 32.0 10.6 63 25-89 63-125 (354)
354 PF03178 CPSF_A: CPSF A subuni 94.7 0.99 2.1E-05 32.6 10.6 99 16-127 91-202 (321)
355 PRK13616 lipoprotein LpqB; Pro 94.7 1.1 2.5E-05 35.4 11.4 89 15-110 353-466 (591)
356 PF10313 DUF2415: Uncharacteri 94.6 0.16 3.5E-06 25.3 4.4 30 93-128 2-34 (43)
357 KOG2395|consensus 94.5 0.44 9.5E-06 36.8 8.4 84 26-111 396-491 (644)
358 PF02897 Peptidase_S9_N: Proly 94.2 0.5 1.1E-05 35.3 8.3 71 60-130 126-213 (414)
359 PF10313 DUF2415: Uncharacteri 94.1 0.31 6.7E-06 24.3 4.8 31 59-89 2-35 (43)
360 KOG1832|consensus 94.1 0.095 2.1E-06 42.8 4.4 77 48-128 1092-1176(1516)
361 PF13360 PQQ_2: PQQ-like domai 93.9 1.3 2.9E-05 30.0 13.8 99 25-132 122-235 (238)
362 COG5167 VID27 Protein involved 93.6 0.68 1.5E-05 35.9 8.0 60 25-87 573-632 (776)
363 KOG2079|consensus 93.5 0.19 4E-06 41.7 5.2 75 62-142 92-175 (1206)
364 PF04053 Coatomer_WDAD: Coatom 93.5 0.44 9.5E-06 36.3 6.9 55 25-85 117-171 (443)
365 KOG2444|consensus 93.2 0.25 5.3E-06 34.0 4.7 63 25-89 114-179 (238)
366 KOG4649|consensus 92.9 2.4 5.3E-05 30.1 12.7 96 25-130 23-126 (354)
367 KOG3630|consensus 92.6 0.35 7.5E-06 40.6 5.5 91 15-108 159-260 (1405)
368 PF14655 RAB3GAP2_N: Rab3 GTPa 92.6 3.1 6.7E-05 31.5 10.2 40 16-59 312-351 (415)
369 PF14870 PSII_BNR: Photosynthe 92.5 3.1 6.6E-05 30.2 14.0 87 22-111 153-252 (302)
370 PF14655 RAB3GAP2_N: Rab3 GTPa 92.4 3.3 7.1E-05 31.4 10.1 37 53-89 303-339 (415)
371 PRK11138 outer membrane biogen 92.2 3.8 8.2E-05 30.5 10.7 21 69-89 335-355 (394)
372 PF00930 DPPIV_N: Dipeptidyl p 91.9 0.93 2E-05 33.3 6.7 58 66-130 1-74 (353)
373 KOG4441|consensus 91.6 4 8.6E-05 32.3 10.1 103 25-130 333-455 (571)
374 COG3391 Uncharacterized conser 91.5 4.6 0.0001 30.1 14.9 110 13-130 117-242 (381)
375 PF07676 PD40: WD40-like Beta 91.4 0.87 1.9E-05 21.7 5.8 29 56-84 7-38 (39)
376 PRK11138 outer membrane biogen 91.3 4.8 0.0001 30.0 11.3 97 25-132 69-183 (394)
377 PF06433 Me-amine-dh_H: Methyl 90.8 2.2 4.9E-05 31.3 7.5 72 13-89 239-322 (342)
378 PF11715 Nup160: Nucleoporin N 90.5 2.4 5.1E-05 33.1 8.1 31 59-89 216-250 (547)
379 PF07569 Hira: TUP1-like enhan 90.4 3.7 8E-05 28.2 8.1 56 65-127 18-95 (219)
380 PF06977 SdiA-regulated: SdiA- 89.9 5.2 0.00011 28.1 14.1 95 14-112 24-138 (248)
381 PF14761 HPS3_N: Hermansky-Pud 89.9 3.2 7E-05 28.4 7.3 55 70-124 29-92 (215)
382 PRK13616 lipoprotein LpqB; Pro 89.8 6.8 0.00015 31.2 10.0 53 57-111 447-515 (591)
383 PF08596 Lgl_C: Lethal giant l 89.3 4.8 0.0001 30.3 8.5 82 27-111 228-326 (395)
384 KOG2114|consensus 89.2 12 0.00025 31.1 12.5 107 16-131 130-247 (933)
385 PF12234 Rav1p_C: RAVE protein 88.9 5.3 0.00011 32.0 8.7 61 59-125 31-102 (631)
386 PRK10115 protease 2; Provision 88.9 4.1 9E-05 33.0 8.4 72 58-129 127-209 (686)
387 KOG4460|consensus 88.7 10 0.00022 29.9 11.0 69 59-133 105-204 (741)
388 PF05694 SBP56: 56kDa selenium 88.5 9.4 0.0002 29.2 10.7 92 35-133 222-348 (461)
389 KOG1916|consensus 88.5 1.4 3E-05 36.5 5.4 80 35-114 153-258 (1283)
390 PF07995 GSDH: Glucose / Sorbo 88.3 8.2 0.00018 28.2 10.8 99 12-113 2-135 (331)
391 PF10647 Gmad1: Lipoprotein Lp 88.1 7.1 0.00015 27.4 12.2 103 14-126 26-143 (253)
392 PF01436 NHL: NHL repeat; Int 87.8 1.6 3.4E-05 19.4 4.3 25 60-84 4-28 (28)
393 TIGR02604 Piru_Ver_Nterm putat 87.4 9.1 0.0002 28.4 8.9 53 58-110 124-202 (367)
394 PF08596 Lgl_C: Lethal giant l 87.0 9.6 0.00021 28.8 8.9 36 92-134 87-122 (395)
395 PF00780 CNH: CNH domain; Int 86.9 8.5 0.00018 26.9 12.0 62 23-89 5-66 (275)
396 PHA02713 hypothetical protein; 86.9 12 0.00027 29.5 9.8 102 25-128 352-489 (557)
397 PF05096 Glu_cyclase_2: Glutam 86.8 9.1 0.0002 27.2 13.8 98 25-133 56-163 (264)
398 COG3391 Uncharacterized conser 86.8 11 0.00024 28.1 12.8 107 15-130 77-193 (381)
399 COG3490 Uncharacterized protei 86.2 11 0.00023 27.4 10.0 88 18-109 120-243 (366)
400 KOG4441|consensus 86.0 16 0.00034 29.1 10.2 103 25-131 381-503 (571)
401 PF04841 Vps16_N: Vps16, N-ter 86.0 13 0.00028 28.1 9.5 48 36-87 62-109 (410)
402 PHA02713 hypothetical protein; 86.0 7.9 0.00017 30.5 8.3 88 36-131 433-537 (557)
403 KOG4499|consensus 85.9 4.4 9.6E-05 28.4 6.1 48 16-67 216-263 (310)
404 PF15390 DUF4613: Domain of un 85.9 16 0.00035 29.1 10.0 72 14-88 115-187 (671)
405 KOG4499|consensus 85.2 11 0.00024 26.6 9.4 95 15-110 161-273 (310)
406 COG4590 ABC-type uncharacteriz 85.0 13 0.00028 28.8 8.6 99 27-132 282-391 (733)
407 PF12768 Rax2: Cortical protei 84.8 12 0.00026 26.8 9.7 88 36-127 17-123 (281)
408 KOG3630|consensus 84.8 6.8 0.00015 33.5 7.5 89 32-126 121-227 (1405)
409 COG5167 VID27 Protein involved 84.1 14 0.0003 29.1 8.5 53 68-127 572-632 (776)
410 COG5276 Uncharacterized conser 83.9 14 0.00031 26.9 12.1 104 20-133 91-205 (370)
411 PF05694 SBP56: 56kDa selenium 82.9 7.2 0.00016 29.8 6.5 54 57-110 311-392 (461)
412 PF03088 Str_synth: Strictosid 82.3 5.7 0.00012 23.2 4.8 40 33-75 35-74 (89)
413 PHA03098 kelch-like protein; P 82.2 22 0.00047 27.7 10.1 103 25-129 295-416 (534)
414 PF03088 Str_synth: Strictosid 81.9 8 0.00017 22.6 7.7 35 77-111 35-76 (89)
415 COG3386 Gluconolactonase [Carb 81.8 18 0.00038 26.4 9.4 40 48-87 153-193 (307)
416 PF10214 Rrn6: RNA polymerase 81.6 29 0.00062 28.7 13.6 107 13-129 147-278 (765)
417 PRK10115 protease 2; Provision 81.1 28 0.00061 28.4 14.5 100 17-126 132-254 (686)
418 TIGR02604 Piru_Ver_Nterm putat 80.5 21 0.00045 26.5 10.5 96 11-110 13-142 (367)
419 PF08728 CRT10: CRT10; InterP 80.3 31 0.00067 28.3 12.9 105 15-126 104-245 (717)
420 PF14870 PSII_BNR: Photosynthe 80.3 20 0.00043 26.1 11.2 66 53-125 140-213 (302)
421 PF06977 SdiA-regulated: SdiA- 79.7 19 0.0004 25.4 8.8 70 52-127 16-94 (248)
422 PHA03098 kelch-like protein; P 79.0 28 0.00062 27.1 9.5 103 25-130 390-514 (534)
423 PF11715 Nup160: Nucleoporin N 79.0 7.3 0.00016 30.5 5.8 26 25-52 230-255 (547)
424 TIGR02171 Fb_sc_TIGR02171 Fibr 76.8 40 0.00086 28.5 9.3 67 35-104 329-411 (912)
425 smart00564 PQQ beta-propeller 76.4 5.8 0.00012 17.7 4.0 24 27-52 8-31 (33)
426 KOG2377|consensus 75.6 36 0.00078 26.5 13.0 78 25-104 35-125 (657)
427 cd00216 PQQ_DH Dehydrogenases 75.3 36 0.00078 26.4 9.5 95 27-133 303-430 (488)
428 COG3386 Gluconolactonase [Carb 74.6 30 0.00066 25.2 10.2 96 13-110 164-274 (307)
429 COG3204 Uncharacterized protei 74.1 31 0.00068 25.1 11.7 104 14-125 88-210 (316)
430 PF10647 Gmad1: Lipoprotein Lp 73.8 28 0.00061 24.4 11.3 97 15-113 69-187 (253)
431 KOG2109|consensus 72.7 3.9 8.5E-05 32.7 2.8 75 37-113 297-390 (788)
432 TIGR02276 beta_rpt_yvtn 40-res 72.5 8.9 0.00019 18.1 5.3 27 27-55 6-32 (42)
433 PF10168 Nup88: Nuclear pore c 72.0 55 0.0012 27.0 10.1 33 57-89 146-181 (717)
434 TIGR03606 non_repeat_PQQ dehyd 71.9 44 0.00096 25.9 13.0 98 12-112 30-166 (454)
435 TIGR03075 PQQ_enz_alc_DH PQQ-d 71.9 32 0.00069 27.1 7.6 52 35-89 441-492 (527)
436 PF12657 TFIIIC_delta: Transcr 71.9 6.3 0.00014 25.9 3.3 29 94-130 7-35 (173)
437 PF10214 Rrn6: RNA polymerase 71.7 42 0.00091 27.8 8.5 67 58-131 146-236 (765)
438 PHA02790 Kelch-like protein; P 71.1 46 0.001 25.8 9.9 100 25-130 363-473 (480)
439 COG3204 Uncharacterized protei 70.8 38 0.00083 24.7 7.7 70 54-129 82-160 (316)
440 PHA02790 Kelch-like protein; P 70.4 48 0.001 25.7 10.0 100 25-129 272-386 (480)
441 KOG1916|consensus 70.3 2.3 5E-05 35.3 1.2 60 26-88 196-266 (1283)
442 TIGR03606 non_repeat_PQQ dehyd 69.0 45 0.00097 25.8 7.6 59 21-80 365-428 (454)
443 PF14583 Pectate_lyase22: Olig 68.9 34 0.00075 25.8 6.8 83 41-131 16-114 (386)
444 PF07250 Glyoxal_oxid_N: Glyox 66.1 38 0.00083 23.8 6.3 73 37-112 48-138 (243)
445 PF01011 PQQ: PQQ enzyme repea 65.4 14 0.00029 17.4 3.9 24 29-54 4-27 (38)
446 PF07995 GSDH: Glucose / Sorbo 62.0 50 0.0011 24.2 6.6 59 23-82 269-330 (331)
447 cd00216 PQQ_DH Dehydrogenases 61.4 75 0.0016 24.7 10.0 63 25-89 61-130 (488)
448 PF01731 Arylesterase: Arylest 61.0 30 0.00066 20.0 6.2 30 58-87 54-84 (86)
449 PF13570 PQQ_3: PQQ-like domai 60.8 17 0.00038 17.2 3.4 21 68-88 20-40 (40)
450 PF08728 CRT10: CRT10; InterP 60.3 69 0.0015 26.4 7.4 63 24-86 176-245 (717)
451 PF05096 Glu_cyclase_2: Glutam 58.8 64 0.0014 23.1 10.8 88 32-131 107-207 (264)
452 PF14269 Arylsulfotran_2: Aryl 58.7 68 0.0015 23.3 7.5 64 21-86 151-219 (299)
453 PF03178 CPSF_A: CPSF A subuni 57.4 70 0.0015 23.1 7.1 63 25-88 139-203 (321)
454 PF09826 Beta_propel: Beta pro 57.2 96 0.0021 24.5 12.1 97 36-135 305-418 (521)
455 PF14583 Pectate_lyase22: Olig 56.1 88 0.0019 23.8 13.7 85 36-127 265-383 (386)
456 KOG3616|consensus 52.9 68 0.0015 26.9 6.3 48 57-104 14-68 (1636)
457 PF07646 Kelch_2: Kelch motif; 52.8 29 0.00062 17.2 3.6 33 98-130 7-41 (49)
458 KOG3950|consensus 52.4 76 0.0016 22.5 5.7 18 57-74 259-276 (292)
459 PF13418 Kelch_4: Galactose ox 52.2 21 0.00046 17.6 2.5 30 101-130 11-40 (49)
460 TIGR02608 delta_60_rpt delta-6 51.7 33 0.00071 18.1 3.2 18 60-77 3-20 (55)
461 COG4880 Secreted protein conta 51.1 1.2E+02 0.0025 23.7 9.5 82 48-133 416-509 (603)
462 PF08954 DUF1900: Domain of un 50.9 62 0.0014 20.5 4.9 57 9-67 8-66 (136)
463 KOG0379|consensus 48.2 1.3E+02 0.0028 23.5 10.2 104 25-129 123-251 (482)
464 KOG2280|consensus 47.3 1.7E+02 0.0037 24.5 8.7 71 36-110 65-146 (829)
465 TIGR03032 conserved hypothetic 47.2 1.2E+02 0.0025 22.6 8.1 41 68-110 212-259 (335)
466 COG3823 Glutamine cyclotransfe 46.1 1E+02 0.0022 21.6 8.2 94 25-128 56-159 (262)
467 PF04841 Vps16_N: Vps16, N-ter 45.7 1.3E+02 0.0029 22.8 14.0 45 58-102 217-270 (410)
468 PF11635 Med16: Mediator compl 44.9 1.6E+02 0.0035 24.5 7.5 66 15-82 261-345 (753)
469 KOG3616|consensus 44.5 39 0.00084 28.2 3.8 71 55-132 335-410 (1636)
470 KOG2377|consensus 42.4 1.7E+02 0.0037 23.1 8.8 94 14-111 69-173 (657)
471 KOG2247|consensus 41.5 8.9 0.00019 29.8 0.0 91 16-109 79-177 (615)
472 COG5276 Uncharacterized conser 41.4 1.4E+02 0.0031 22.0 13.3 103 16-130 131-244 (370)
473 TIGR02171 Fb_sc_TIGR02171 Fibr 41.2 1E+02 0.0022 26.2 5.8 50 79-129 329-387 (912)
474 KOG1900|consensus 41.1 2.6E+02 0.0055 25.1 8.1 79 32-112 96-199 (1311)
475 KOG4460|consensus 40.9 1.9E+02 0.0042 23.3 8.0 66 22-89 112-200 (741)
476 COG4257 Vgb Streptogramin lyas 40.8 1.4E+02 0.0031 21.8 8.4 101 25-128 73-187 (353)
477 PF12768 Rax2: Cortical protei 40.1 1.1E+02 0.0024 22.1 5.3 52 79-130 16-75 (281)
478 PF10584 Proteasome_A_N: Prote 39.5 6.4 0.00014 16.8 -0.6 6 99-104 8-13 (23)
479 COG1770 PtrB Protease II [Amin 36.2 2.5E+02 0.0054 23.2 7.9 55 59-113 130-195 (682)
480 KOG0918|consensus 35.1 96 0.0021 23.8 4.4 34 56-89 310-344 (476)
481 TIGR03075 PQQ_enz_alc_DH PQQ-d 34.5 2.3E+02 0.0051 22.4 10.8 63 25-89 69-140 (527)
482 PF13964 Kelch_6: Kelch motif 34.2 64 0.0014 15.9 3.3 30 101-130 10-39 (50)
483 PF08309 LVIVD: LVIVD repeat; 33.7 65 0.0014 15.8 4.3 27 102-134 10-36 (42)
484 COG5308 NUP170 Nuclear pore co 33.4 1.7E+02 0.0037 25.2 5.8 80 32-113 99-203 (1263)
485 KOG1900|consensus 33.3 3.6E+02 0.0078 24.2 8.0 34 55-88 240-273 (1311)
486 PRK13684 Ycf48-like protein; P 32.6 2E+02 0.0044 21.1 10.9 83 25-110 184-278 (334)
487 PF08801 Nucleoporin_N: Nup133 32.0 87 0.0019 23.7 4.0 31 58-88 190-220 (422)
488 PF05787 DUF839: Bacterial pro 30.4 2.4E+02 0.0052 22.4 6.2 17 92-108 502-518 (524)
489 PF11635 Med16: Mediator compl 30.1 3.3E+02 0.0071 22.8 7.6 56 58-113 260-342 (753)
490 COG1770 PtrB Protease II [Amin 29.4 3.3E+02 0.0071 22.5 10.6 99 24-130 139-259 (682)
491 TIGR03548 mutarot_permut cycli 28.7 2.3E+02 0.0049 20.5 10.2 104 25-130 73-197 (323)
492 KOG0379|consensus 28.1 2.9E+02 0.0064 21.6 9.0 63 69-131 123-202 (482)
493 PF03022 MRJP: Major royal jel 27.5 2.4E+02 0.0051 20.3 8.3 61 14-76 188-254 (287)
494 TIGR03547 muta_rot_YjhT mutatr 27.0 2.5E+02 0.0054 20.4 10.2 34 79-112 168-210 (346)
495 COG1520 FOG: WD40-like repeat 26.4 2.7E+02 0.0058 20.6 6.4 61 25-89 69-131 (370)
496 KOG1520|consensus 26.3 66 0.0014 24.3 2.4 73 33-108 197-281 (376)
497 KOG3179|consensus 26.2 85 0.0018 21.7 2.7 41 13-58 153-193 (245)
498 PF06739 SBBP: Beta-propeller 25.7 89 0.0019 14.8 3.3 22 58-79 13-34 (38)
499 PF01344 Kelch_1: Kelch motif; 24.7 95 0.0021 14.8 3.8 30 101-130 10-39 (47)
500 PF14779 BBS1: Ciliary BBSome 24.5 2.7E+02 0.0059 19.9 6.3 56 25-83 195-254 (257)
No 1
>KOG0271|consensus
Probab=99.88 E-value=2.8e-22 Score=141.09 Aligned_cols=117 Identities=22% Similarity=0.381 Sum_probs=103.4
Q ss_pred cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----
Q psy7062 14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC---- 89 (148)
Q Consensus 14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~---- 89 (148)
..++.|+|+ +..|++|+.|.++|+||+.+. .+..++++|..+|.+++|+|||+.+++|+.||+|++||.+++
T Consensus 118 Vl~~~fsp~--g~~l~tGsGD~TvR~WD~~Te--Tp~~t~KgH~~WVlcvawsPDgk~iASG~~dg~I~lwdpktg~~~g 193 (480)
T KOG0271|consen 118 VLSVQFSPT--GSRLVTGSGDTTVRLWDLDTE--TPLFTCKGHKNWVLCVAWSPDGKKIASGSKDGSIRLWDPKTGQQIG 193 (480)
T ss_pred EEEEEecCC--CceEEecCCCceEEeeccCCC--CcceeecCCccEEEEEEECCCcchhhccccCCeEEEecCCCCCccc
Confidence 457788886 899999999999999999998 899999999999999999999999999999999999999887
Q ss_pred --cc---ccceEEEEcc-----CCCEEEEEecCCceecCeeEEEeecCCCcceeccCcccC
Q psy7062 90 --FI---QQVNALRITP-----DKQLLASAEELSCCYCGAAVFVYNSCYPAAVVASNTLVK 140 (148)
Q Consensus 90 --~~---~~i~~~~~sp-----~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~~~~~~ 140 (148)
|. .+|.+++|.| ..+.|++++.|| .+++||+...+.+....++..
T Consensus 194 ~~l~gH~K~It~Lawep~hl~p~~r~las~skDg------~vrIWd~~~~~~~~~lsgHT~ 248 (480)
T KOG0271|consen 194 RALRGHKKWITALAWEPLHLVPPCRRLASSSKDG------SVRIWDTKLGTCVRTLSGHTA 248 (480)
T ss_pred ccccCcccceeEEeecccccCCCccceecccCCC------CEEEEEccCceEEEEeccCcc
Confidence 44 8899999976 568999999999 999999987666665555443
No 2
>KOG0272|consensus
Probab=99.87 E-value=2.3e-22 Score=142.56 Aligned_cols=112 Identities=21% Similarity=0.356 Sum_probs=101.7
Q ss_pred cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----
Q psy7062 14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC---- 89 (148)
Q Consensus 14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~---- 89 (148)
...++|+|+ |++|+++|-|.+-++||++++ ..+..-++|...|.+++|.|||..+++|+.|..-++||++++
T Consensus 264 Vs~VafHPs--G~~L~TasfD~tWRlWD~~tk--~ElL~QEGHs~~v~~iaf~~DGSL~~tGGlD~~~RvWDlRtgr~im 339 (459)
T KOG0272|consen 264 VSRVAFHPS--GKFLGTASFDSTWRLWDLETK--SELLLQEGHSKGVFSIAFQPDGSLAATGGLDSLGRVWDLRTGRCIM 339 (459)
T ss_pred heeeeecCC--Cceeeecccccchhhcccccc--hhhHhhcccccccceeEecCCCceeeccCccchhheeecccCcEEE
Confidence 357889998 999999999999999999998 667677899999999999999999999999999999999998
Q ss_pred -cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceecc
Q psy7062 90 -FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVAS 135 (148)
Q Consensus 90 -~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~ 135 (148)
|. .+|..+.|+|+|.+|++|+.|+ ++++||++..+....+
T Consensus 340 ~L~gH~k~I~~V~fsPNGy~lATgs~Dn------t~kVWDLR~r~~ly~i 383 (459)
T KOG0272|consen 340 FLAGHIKEILSVAFSPNGYHLATGSSDN------TCKVWDLRMRSELYTI 383 (459)
T ss_pred EecccccceeeEeECCCceEEeecCCCC------cEEEeeecccccceec
Confidence 33 8899999999999999999988 9999999977764433
No 3
>KOG0263|consensus
Probab=99.86 E-value=4.7e-21 Score=144.09 Aligned_cols=108 Identities=22% Similarity=0.342 Sum_probs=99.9
Q ss_pred CcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc---
Q psy7062 13 GQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC--- 89 (148)
Q Consensus 13 ~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~--- 89 (148)
+..|+.|+|+ +.++++||.|.+|++||+.++ ..++.|.+|++.|.+++|||+|++|++|+.|+.|++||+.++
T Consensus 537 DV~cv~FHPN--s~Y~aTGSsD~tVRlWDv~~G--~~VRiF~GH~~~V~al~~Sp~Gr~LaSg~ed~~I~iWDl~~~~~v 612 (707)
T KOG0263|consen 537 DVDCVSFHPN--SNYVATGSSDRTVRLWDVSTG--NSVRIFTGHKGPVTALAFSPCGRYLASGDEDGLIKIWDLANGSLV 612 (707)
T ss_pred ccceEEECCc--ccccccCCCCceEEEEEcCCC--cEEEEecCCCCceEEEEEcCCCceEeecccCCcEEEEEcCCCcch
Confidence 3468999999 899999999999999999999 889999999999999999999999999999999999999987
Q ss_pred --cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062 90 --FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA 130 (148)
Q Consensus 90 --~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~ 130 (148)
+. +.+.++.|+.+|..|++++.|. +|++||+....
T Consensus 613 ~~l~~Ht~ti~SlsFS~dg~vLasgg~Dn------sV~lWD~~~~~ 652 (707)
T KOG0263|consen 613 KQLKGHTGTIYSLSFSRDGNVLASGGADN------SVRLWDLTKVI 652 (707)
T ss_pred hhhhcccCceeEEEEecCCCEEEecCCCC------eEEEEEchhhc
Confidence 22 8899999999999999999977 99999987543
No 4
>KOG0279|consensus
Probab=99.83 E-value=2.5e-19 Score=121.69 Aligned_cols=110 Identities=19% Similarity=0.314 Sum_probs=97.1
Q ss_pred EEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc--cc---
Q psy7062 17 TVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC--FI--- 91 (148)
Q Consensus 17 ~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~--~~--- 91 (148)
++..++ |++.++++.|+++++||+.++ +..+.|.+|+..|.+++++||.+.+++|+.|.++++|+.... ++
T Consensus 69 v~~s~d--g~~alS~swD~~lrlWDl~~g--~~t~~f~GH~~dVlsva~s~dn~qivSGSrDkTiklwnt~g~ck~t~~~ 144 (315)
T KOG0279|consen 69 VVLSSD--GNFALSASWDGTLRLWDLATG--ESTRRFVGHTKDVLSVAFSTDNRQIVSGSRDKTIKLWNTLGVCKYTIHE 144 (315)
T ss_pred eEEccC--CceEEeccccceEEEEEecCC--cEEEEEEecCCceEEEEecCCCceeecCCCcceeeeeeecccEEEEEec
Confidence 344455 999999999999999999998 889999999999999999999999999999999999999877 32
Q ss_pred ----ccceEEEEccC--CCEEEEEecCCceecCeeEEEeecCCCcceeccC
Q psy7062 92 ----QQVNALRITPD--KQLLASAEELSCCYCGAAVFVYNSCYPAAVVASN 136 (148)
Q Consensus 92 ----~~i~~~~~sp~--~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~~ 136 (148)
..+.|++|+|+ ...|++++.|+ +|++||+++-+....+.
T Consensus 145 ~~~~~WVscvrfsP~~~~p~Ivs~s~Dk------tvKvWnl~~~~l~~~~~ 189 (315)
T KOG0279|consen 145 DSHREWVSCVRFSPNESNPIIVSASWDK------TVKVWNLRNCQLRTTFI 189 (315)
T ss_pred CCCcCcEEEEEEcCCCCCcEEEEccCCc------eEEEEccCCcchhhccc
Confidence 67999999997 67999999999 99999999776655443
No 5
>KOG0272|consensus
Probab=99.83 E-value=1.9e-20 Score=132.92 Aligned_cols=120 Identities=21% Similarity=0.266 Sum_probs=108.9
Q ss_pred EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----c
Q psy7062 15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC----F 90 (148)
Q Consensus 15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~----~ 90 (148)
.++.|+|..++.-+++|+.||++++|++++. .++..+.+|..+|..++|+|+|++|++++.|.+-++||+++. +
T Consensus 221 ~~~~fhP~~~~~~lat~s~Dgtvklw~~~~e--~~l~~l~gH~~RVs~VafHPsG~~L~TasfD~tWRlWD~~tk~ElL~ 298 (459)
T KOG0272|consen 221 GAAVFHPVDSDLNLATASADGTVKLWKLSQE--TPLQDLEGHLARVSRVAFHPSGKFLGTASFDSTWRLWDLETKSELLL 298 (459)
T ss_pred eeEEEccCCCccceeeeccCCceeeeccCCC--cchhhhhcchhhheeeeecCCCceeeecccccchhhcccccchhhHh
Confidence 5778888755778999999999999999987 889999999999999999999999999999999999999998 2
Q ss_pred c----ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceeccCcccCcc
Q psy7062 91 I----QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVASNTLVKPQ 142 (148)
Q Consensus 91 ~----~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~ 142 (148)
+ ..+.+++|+|||..+++|+-|. .-++||+++...+..+.+++++-
T Consensus 299 QEGHs~~v~~iaf~~DGSL~~tGGlD~------~~RvWDlRtgr~im~L~gH~k~I 348 (459)
T KOG0272|consen 299 QEGHSKGVFSIAFQPDGSLAATGGLDS------LGRVWDLRTGRCIMFLAGHIKEI 348 (459)
T ss_pred hcccccccceeEecCCCceeeccCccc------hhheeecccCcEEEEecccccce
Confidence 2 7899999999999999999987 78999999999999888876654
No 6
>KOG0266|consensus
Probab=99.82 E-value=7.5e-19 Score=131.23 Aligned_cols=120 Identities=21% Similarity=0.350 Sum_probs=102.6
Q ss_pred CcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc---
Q psy7062 13 GQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC--- 89 (148)
Q Consensus 13 ~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~--- 89 (148)
....++|+++ +.++++++.|.++++||++.. ...++++.+|...|++++|+|+++.+++|+.|+++++||++++
T Consensus 205 ~v~~~~fs~d--~~~l~s~s~D~tiriwd~~~~-~~~~~~l~gH~~~v~~~~f~p~g~~i~Sgs~D~tvriWd~~~~~~~ 281 (456)
T KOG0266|consen 205 GVSDVAFSPD--GSYLLSGSDDKTLRIWDLKDD-GRNLKTLKGHSTYVTSVAFSPDGNLLVSGSDDGTVRIWDVRTGECV 281 (456)
T ss_pred ceeeeEECCC--CcEEEEecCCceEEEeeccCC-CeEEEEecCCCCceEEEEecCCCCEEEEecCCCcEEEEeccCCeEE
Confidence 4567888888 789999999999999999432 2778999999999999999999999999999999999999987
Q ss_pred --cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc--ceeccCcccCc
Q psy7062 90 --FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA--AVVASNTLVKP 141 (148)
Q Consensus 90 --~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~--~~~~~~~~~~~ 141 (148)
+. .++.+++|++++++|++++.|+ .|++||+.+.. ..........+
T Consensus 282 ~~l~~hs~~is~~~f~~d~~~l~s~s~d~------~i~vwd~~~~~~~~~~~~~~~~~~ 334 (456)
T KOG0266|consen 282 RKLKGHSDGISGLAFSPDGNLLVSASYDG------TIRVWDLETGSKLCLKLLSGAENS 334 (456)
T ss_pred EeeeccCCceEEEEECCCCCEEEEcCCCc------cEEEEECCCCceeeeecccCCCCC
Confidence 33 8899999999999999999988 99999999877 23444433333
No 7
>KOG0263|consensus
Probab=99.82 E-value=1e-19 Score=136.93 Aligned_cols=117 Identities=23% Similarity=0.325 Sum_probs=104.5
Q ss_pred EEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----cc
Q psy7062 17 TVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-----FI 91 (148)
Q Consensus 17 ~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-----~~ 91 (148)
+.|+|. |-++|+++.|++.++|..... .+++.+.+|-+.|.|++|+|+..++++||.|.++++||+.++ |.
T Consensus 499 V~F~P~--GyYFatas~D~tArLWs~d~~--~PlRifaghlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~~VRiF~ 574 (707)
T KOG0263|consen 499 VQFAPR--GYYFATASHDQTARLWSTDHN--KPLRIFAGHLSDVDCVSFHPNSNYVATGSSDRTVRLWDVSTGNSVRIFT 574 (707)
T ss_pred EEecCC--ceEEEecCCCceeeeeecccC--CchhhhcccccccceEEECCcccccccCCCCceEEEEEcCCCcEEEEec
Confidence 445565 999999999999999999987 899999999999999999999999999999999999999998 54
Q ss_pred ---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceeccCcccCccee
Q psy7062 92 ---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVASNTLVKPQVT 144 (148)
Q Consensus 92 ---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~ 144 (148)
++|.+++|||+|++|++|+.|+ .|.+||+.+.+.+....++ +..+.
T Consensus 575 GH~~~V~al~~Sp~Gr~LaSg~ed~------~I~iWDl~~~~~v~~l~~H-t~ti~ 623 (707)
T KOG0263|consen 575 GHKGPVTALAFSPCGRYLASGDEDG------LIKIWDLANGSLVKQLKGH-TGTIY 623 (707)
T ss_pred CCCCceEEEEEcCCCceEeecccCC------cEEEEEcCCCcchhhhhcc-cCcee
Confidence 9999999999999999999999 9999999988877666555 44443
No 8
>PTZ00421 coronin; Provisional
Probab=99.81 E-value=2.5e-18 Score=128.95 Aligned_cols=116 Identities=16% Similarity=0.257 Sum_probs=97.2
Q ss_pred cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCC-----CCceEEecCCCCCEEEEEEccCC-CEEEEEeCCCcEEEEECC
Q psy7062 14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNN-----PNPVINCEGVSKNVVEVGFQEDG-KWMFTGGEDCRARIWDLS 87 (148)
Q Consensus 14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~-----~~~~~~~~~~~~~i~~~~~sp~~-~~l~~~~~~~~i~l~d~~ 87 (148)
..+++|+|. ++++|++|+.|++|++||+.+.. ..++..+.+|...|.+++|+|++ .++++++.|+++++||++
T Consensus 78 V~~v~fsP~-d~~~LaSgS~DgtIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~ 156 (493)
T PTZ00421 78 IIDVAFNPF-DPQKLFTASEDGTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMVVNVWDVE 156 (493)
T ss_pred EEEEEEcCC-CCCEEEEEeCCCEEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCEEEEEECC
Confidence 357778773 27799999999999999997641 13567788999999999999975 699999999999999998
Q ss_pred cc-----cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceeccC
Q psy7062 88 LC-----FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVASN 136 (148)
Q Consensus 88 ~~-----~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~~ 136 (148)
++ +. ..+.+++|+|+++.|++++.|+ +|++||+++.+.+....
T Consensus 157 tg~~~~~l~~h~~~V~sla~spdG~lLatgs~Dg------~IrIwD~rsg~~v~tl~ 207 (493)
T PTZ00421 157 RGKAVEVIKCHSDQITSLEWNLDGSLLCTTSKDK------KLNIIDPRDGTIVSSVE 207 (493)
T ss_pred CCeEEEEEcCCCCceEEEEEECCCCEEEEecCCC------EEEEEECCCCcEEEEEe
Confidence 77 32 6799999999999999999988 99999999877654443
No 9
>KOG0279|consensus
Probab=99.80 E-value=1.7e-18 Score=117.63 Aligned_cols=113 Identities=19% Similarity=0.281 Sum_probs=100.3
Q ss_pred cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----
Q psy7062 14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC---- 89 (148)
Q Consensus 14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~---- 89 (148)
..++.|+|+....++++++.|+++++||+++- +....+.+|+..++.+.+||||...++|++||.+.+||++..
T Consensus 151 VscvrfsP~~~~p~Ivs~s~DktvKvWnl~~~--~l~~~~~gh~~~v~t~~vSpDGslcasGgkdg~~~LwdL~~~k~ly 228 (315)
T KOG0279|consen 151 VSCVRFSPNESNPIIVSASWDKTVKVWNLRNC--QLRTTFIGHSGYVNTVTVSPDGSLCASGGKDGEAMLWDLNEGKNLY 228 (315)
T ss_pred EEEEEEcCCCCCcEEEEccCCceEEEEccCCc--chhhccccccccEEEEEECCCCCEEecCCCCceEEEEEccCCceeE
Confidence 46899999988999999999999999999998 788889999999999999999999999999999999999887
Q ss_pred -cc--ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceecc
Q psy7062 90 -FI--QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVAS 135 (148)
Q Consensus 90 -~~--~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~ 135 (148)
+. ..|.+++|+|+.-+|+.+... .|++||+.+...+..+
T Consensus 229 sl~a~~~v~sl~fspnrywL~~at~~-------sIkIwdl~~~~~v~~l 270 (315)
T KOG0279|consen 229 SLEAFDIVNSLCFSPNRYWLCAATAT-------SIKIWDLESKAVVEEL 270 (315)
T ss_pred eccCCCeEeeEEecCCceeEeeccCC-------ceEEEeccchhhhhhc
Confidence 33 889999999999988877653 4999999876655544
No 10
>KOG0273|consensus
Probab=99.79 E-value=3.2e-18 Score=123.19 Aligned_cols=113 Identities=15% Similarity=0.309 Sum_probs=101.7
Q ss_pred cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCC---------CEEEEEeCCCcEEEE
Q psy7062 14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDG---------KWMFTGGEDCRARIW 84 (148)
Q Consensus 14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~---------~~l~~~~~~~~i~l~ 84 (148)
..++.|+|. +.+|+++++|+++++|..... .....+.+|...|+.+.|+|.| ..+++++.|+++++|
T Consensus 362 V~alk~n~t--g~LLaS~SdD~TlkiWs~~~~--~~~~~l~~Hskei~t~~wsp~g~v~~n~~~~~~l~sas~dstV~lw 437 (524)
T KOG0273|consen 362 VNALKWNPT--GSLLASCSDDGTLKIWSMGQS--NSVHDLQAHSKEIYTIKWSPTGPVTSNPNMNLMLASASFDSTVKLW 437 (524)
T ss_pred eEEEEECCC--CceEEEecCCCeeEeeecCCC--cchhhhhhhccceeeEeecCCCCccCCCcCCceEEEeecCCeEEEE
Confidence 478888888 999999999999999999887 7889999999999999999876 368999999999999
Q ss_pred ECCcc-----cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceeccC
Q psy7062 85 DLSLC-----FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVASN 136 (148)
Q Consensus 85 d~~~~-----~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~~ 136 (148)
|+..+ |. .++.+++|+|+|+++++|+.|+ .|.+|+.++.+..+.+.
T Consensus 438 dv~~gv~i~~f~kH~~pVysvafS~~g~ylAsGs~dg------~V~iws~~~~~l~~s~~ 491 (524)
T KOG0273|consen 438 DVESGVPIHTLMKHQEPVYSVAFSPNGRYLASGSLDG------CVHIWSTKTGKLVKSYQ 491 (524)
T ss_pred EccCCceeEeeccCCCceEEEEecCCCcEEEecCCCC------eeEeccccchheeEeec
Confidence 99998 42 8999999999999999999999 99999999887766553
No 11
>KOG0286|consensus
Probab=99.78 E-value=6.9e-18 Score=115.48 Aligned_cols=104 Identities=17% Similarity=0.337 Sum_probs=95.0
Q ss_pred ccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEcc-CCCEEEEEeCCCcEEEEECCcc-----cc---ccce
Q psy7062 25 VEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQE-DGKWMFTGGEDCRARIWDLSLC-----FI---QQVN 95 (148)
Q Consensus 25 ~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp-~~~~l~~~~~~~~i~l~d~~~~-----~~---~~i~ 95 (148)
...+++++.|.++-+||++++ +.+..|.+|...|.+++++| +++.+++|+.|...++||++.+ |. ..|+
T Consensus 156 D~~ilT~SGD~TCalWDie~g--~~~~~f~GH~gDV~slsl~p~~~ntFvSg~cD~~aklWD~R~~~c~qtF~ghesDIN 233 (343)
T KOG0286|consen 156 DNHILTGSGDMTCALWDIETG--QQTQVFHGHTGDVMSLSLSPSDGNTFVSGGCDKSAKLWDVRSGQCVQTFEGHESDIN 233 (343)
T ss_pred CCceEecCCCceEEEEEcccc--eEEEEecCCcccEEEEecCCCCCCeEEecccccceeeeeccCcceeEeecccccccc
Confidence 345677799999999999999 89999999999999999999 9999999999999999999998 54 8899
Q ss_pred EEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceeccC
Q psy7062 96 ALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVASN 136 (148)
Q Consensus 96 ~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~~ 136 (148)
+++|.|+|.-+++|++|+ +.++||++..+++..++
T Consensus 234 sv~ffP~G~afatGSDD~------tcRlyDlRaD~~~a~ys 268 (343)
T KOG0286|consen 234 SVRFFPSGDAFATGSDDA------TCRLYDLRADQELAVYS 268 (343)
T ss_pred eEEEccCCCeeeecCCCc------eeEEEeecCCcEEeeec
Confidence 999999999999999988 99999999887766554
No 12
>KOG0266|consensus
Probab=99.78 E-value=1e-17 Score=125.20 Aligned_cols=115 Identities=18% Similarity=0.284 Sum_probs=102.0
Q ss_pred cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-c--
Q psy7062 14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-F-- 90 (148)
Q Consensus 14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-~-- 90 (148)
..+++|++. ++++++|+.|++|++||++++ +.+..+.+|...|++++|+++++.+++++.|+.+++||+.++ +
T Consensus 249 v~~~~f~p~--g~~i~Sgs~D~tvriWd~~~~--~~~~~l~~hs~~is~~~f~~d~~~l~s~s~d~~i~vwd~~~~~~~~ 324 (456)
T KOG0266|consen 249 VTSVAFSPD--GNLLVSGSDDGTVRIWDVRTG--ECVRKLKGHSDGISGLAFSPDGNLLVSASYDGTIRVWDLETGSKLC 324 (456)
T ss_pred eEEEEecCC--CCEEEEecCCCcEEEEeccCC--eEEEeeeccCCceEEEEECCCCCEEEEcCCCccEEEEECCCCceee
Confidence 367777787 799999999999999999998 899999999999999999999999999999999999999887 1
Q ss_pred ----c----c-cceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceeccCcc
Q psy7062 91 ----I----Q-QVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVASNTL 138 (148)
Q Consensus 91 ----~----~-~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~~~~ 138 (148)
. . ++.+++|+|++.+++++..|+ .+++||+.....+..+..+
T Consensus 325 ~~~~~~~~~~~~~~~~~fsp~~~~ll~~~~d~------~~~~w~l~~~~~~~~~~~~ 375 (456)
T KOG0266|consen 325 LKLLSGAENSAPVTSVQFSPNGKYLLSASLDR------TLKLWDLRSGKSVGTYTGH 375 (456)
T ss_pred eecccCCCCCCceeEEEECCCCcEEEEecCCC------eEEEEEccCCcceeeeccc
Confidence 1 3 579999999999999999988 9999999987766555433
No 13
>PTZ00420 coronin; Provisional
Probab=99.78 E-value=3.3e-17 Score=124.18 Aligned_cols=117 Identities=15% Similarity=0.240 Sum_probs=95.3
Q ss_pred cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCC------CceEEecCCCCCEEEEEEccCCCE-EEEEeCCCcEEEEEC
Q psy7062 14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNP------NPVINCEGVSKNVVEVGFQEDGKW-MFTGGEDCRARIWDL 86 (148)
Q Consensus 14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~------~~~~~~~~~~~~i~~~~~sp~~~~-l~~~~~~~~i~l~d~ 86 (148)
..+++|+|.. +.+|++|+.|++|++||+.+... .++..+.+|...|.+++|+|++.. +++++.|+++++||+
T Consensus 77 V~~lafsP~~-~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V~sVaf~P~g~~iLaSgS~DgtIrIWDl 155 (568)
T PTZ00420 77 ILDLQFNPCF-SEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKKISIIDWNPMNYYIMCSSGFDSFVNIWDI 155 (568)
T ss_pred EEEEEEcCCC-CCEEEEEeCCCeEEEEECCCCCccccccccceEEeecCCCcEEEEEECCCCCeEEEEEeCCCeEEEEEC
Confidence 3567777642 67999999999999999976411 134567789999999999999875 578999999999999
Q ss_pred Ccc-----cc--ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceeccCc
Q psy7062 87 SLC-----FI--QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVASNT 137 (148)
Q Consensus 87 ~~~-----~~--~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~~~ 137 (148)
+++ +. ..+.+++|+|+|.+|++++.|+ +|++||+++...+.....
T Consensus 156 ~tg~~~~~i~~~~~V~SlswspdG~lLat~s~D~------~IrIwD~Rsg~~i~tl~g 207 (568)
T PTZ00420 156 ENEKRAFQINMPKKLSSLKWNIKGNLLSGTCVGK------HMHIIDPRKQEIASSFHI 207 (568)
T ss_pred CCCcEEEEEecCCcEEEEEECCCCCEEEEEecCC------EEEEEECCCCcEEEEEec
Confidence 887 22 6799999999999999999888 999999998776655443
No 14
>KOG0271|consensus
Probab=99.78 E-value=2.7e-18 Score=121.23 Aligned_cols=102 Identities=18% Similarity=0.316 Sum_probs=95.3
Q ss_pred cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----
Q psy7062 14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC---- 89 (148)
Q Consensus 14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~---- 89 (148)
.+.+.|+|+ +.++|+++-|.+|++||-+++ +.+.+|++|-..|+.++|+.|.+.+++|+.|.++++||+++.
T Consensus 370 Vn~V~fSPd--~r~IASaSFDkSVkLW~g~tG--k~lasfRGHv~~VYqvawsaDsRLlVS~SkDsTLKvw~V~tkKl~~ 445 (480)
T KOG0271|consen 370 VNHVSFSPD--GRYIASASFDKSVKLWDGRTG--KFLASFRGHVAAVYQVAWSADSRLLVSGSKDSTLKVWDVRTKKLKQ 445 (480)
T ss_pred eeeEEECCC--ccEEEEeecccceeeeeCCCc--chhhhhhhccceeEEEEeccCccEEEEcCCCceEEEEEeeeeeecc
Confidence 367888898 999999999999999999999 999999999999999999999999999999999999999987
Q ss_pred -cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEee
Q psy7062 90 -FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYN 125 (148)
Q Consensus 90 -~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d 125 (148)
+. ..++++.|+|||+.+++|+.|. .+++|.
T Consensus 446 DLpGh~DEVf~vDwspDG~rV~sggkdk------v~~lw~ 479 (480)
T KOG0271|consen 446 DLPGHADEVFAVDWSPDGQRVASGGKDK------VLRLWR 479 (480)
T ss_pred cCCCCCceEEEEEecCCCceeecCCCce------EEEeec
Confidence 33 8899999999999999999988 888884
No 15
>KOG0285|consensus
Probab=99.77 E-value=1e-17 Score=117.47 Aligned_cols=116 Identities=21% Similarity=0.316 Sum_probs=104.5
Q ss_pred cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----
Q psy7062 14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC---- 89 (148)
Q Consensus 14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~---- 89 (148)
..+++++|- ++.|++|+.|+++++||+.++ +...++.+|...+..+++|+..-++++++.|+.++.||+...
T Consensus 154 Vr~vavdP~--n~wf~tgs~DrtikIwDlatg--~LkltltGhi~~vr~vavS~rHpYlFs~gedk~VKCwDLe~nkvIR 229 (460)
T KOG0285|consen 154 VRSVAVDPG--NEWFATGSADRTIKIWDLATG--QLKLTLTGHIETVRGVAVSKRHPYLFSAGEDKQVKCWDLEYNKVIR 229 (460)
T ss_pred EEEEeeCCC--ceeEEecCCCceeEEEEcccC--eEEEeecchhheeeeeeecccCceEEEecCCCeeEEEechhhhhHH
Confidence 468888887 899999999999999999999 888899999999999999999999999999999999999877
Q ss_pred -cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceeccCccc
Q psy7062 90 -FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVASNTLV 139 (148)
Q Consensus 90 -~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~~~~~ 139 (148)
+. +.+.+++.+|.-..|+++++|. .+++||+++...+..+.++-
T Consensus 230 ~YhGHlS~V~~L~lhPTldvl~t~grDs------t~RvWDiRtr~~V~~l~GH~ 277 (460)
T KOG0285|consen 230 HYHGHLSGVYCLDLHPTLDVLVTGGRDS------TIRVWDIRTRASVHVLSGHT 277 (460)
T ss_pred HhccccceeEEEeccccceeEEecCCcc------eEEEeeecccceEEEecCCC
Confidence 22 8899999999999999999988 99999999887776655443
No 16
>KOG0315|consensus
Probab=99.76 E-value=3.6e-17 Score=110.00 Aligned_cols=106 Identities=40% Similarity=0.685 Sum_probs=94.3
Q ss_pred EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----
Q psy7062 15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC----- 89 (148)
Q Consensus 15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~----- 89 (148)
+.+...|+ +.+||+ .....||+||+++.+..++.++.+|+..|+.+.|.-+|+++++|+.||++++||+++.
T Consensus 44 NrLeiTpd--k~~LAa-a~~qhvRlyD~~S~np~Pv~t~e~h~kNVtaVgF~~dgrWMyTgseDgt~kIWdlR~~~~qR~ 120 (311)
T KOG0315|consen 44 NRLEITPD--KKDLAA-AGNQHVRLYDLNSNNPNPVATFEGHTKNVTAVGFQCDGRWMYTGSEDGTVKIWDLRSLSCQRN 120 (311)
T ss_pred eeEEEcCC--cchhhh-ccCCeeEEEEccCCCCCceeEEeccCCceEEEEEeecCeEEEecCCCceEEEEeccCcccchh
Confidence 45555666 888888 4468999999999877799999999999999999999999999999999999999987
Q ss_pred cc--ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCC
Q psy7062 90 FI--QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYP 129 (148)
Q Consensus 90 ~~--~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~ 129 (148)
|+ ++++++..+|+...|+++..+| .|++||+...
T Consensus 121 ~~~~spVn~vvlhpnQteLis~dqsg------~irvWDl~~~ 156 (311)
T KOG0315|consen 121 YQHNSPVNTVVLHPNQTELISGDQSG------NIRVWDLGEN 156 (311)
T ss_pred ccCCCCcceEEecCCcceEEeecCCC------cEEEEEccCC
Confidence 44 9999999999999999999877 9999998754
No 17
>KOG0277|consensus
Probab=99.76 E-value=2.1e-17 Score=111.30 Aligned_cols=130 Identities=12% Similarity=0.108 Sum_probs=101.2
Q ss_pred eeecCcEEEEEe--CCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEcc-CCCEEEEEeCCCcEEEEE
Q psy7062 9 LTAFGQISTVFD--SKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQE-DGKWMFTGGEDCRARIWD 85 (148)
Q Consensus 9 ~~~~~~~~~~~~--~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp-~~~~l~~~~~~~~i~l~d 85 (148)
.+.+..+..+.| +.. ++.+++++-|++|++|+...+ +.+.++.+|...|....|+| .++.+++++.|+++++||
T Consensus 100 ~kEH~~EV~Svdwn~~~-r~~~ltsSWD~TiKLW~~~r~--~Sv~Tf~gh~~~Iy~a~~sp~~~nlfas~Sgd~~l~lwd 176 (311)
T KOG0277|consen 100 FKEHKREVYSVDWNTVR-RRIFLTSSWDGTIKLWDPNRP--NSVQTFNGHNSCIYQAAFSPHIPNLFASASGDGTLRLWD 176 (311)
T ss_pred HHhhhhheEEecccccc-ceeEEeeccCCceEeecCCCC--cceEeecCCccEEEEEecCCCCCCeEEEccCCceEEEEE
Confidence 344444444444 433 566666699999999999988 89999999999999999999 678999999999999999
Q ss_pred CCcc-----cc---ccceEEEEcc-CCCEEEEEecCCceecCeeEEEeecCCCcceeccCcccCcceeecc
Q psy7062 86 LSLC-----FI---QQVNALRITP-DKQLLASAEELSCCYCGAAVFVYNSCYPAAVVASNTLVKPQVTRAK 147 (148)
Q Consensus 86 ~~~~-----~~---~~i~~~~~sp-~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~ 147 (148)
++.. ++ ..+.+..|+. +...+++++.|+ .|+.||+++.+.+...--.+.-.+.|+|
T Consensus 177 vr~~gk~~~i~ah~~Eil~cdw~ky~~~vl~Tg~vd~------~vr~wDir~~r~pl~eL~gh~~AVRkvk 241 (311)
T KOG0277|consen 177 VRSPGKFMSIEAHNSEILCCDWSKYNHNVLATGGVDN------LVRGWDIRNLRTPLFELNGHGLAVRKVK 241 (311)
T ss_pred ecCCCceeEEEeccceeEeecccccCCcEEEecCCCc------eEEEEehhhccccceeecCCceEEEEEe
Confidence 9876 33 5799999998 778899999988 9999999987755433333444444443
No 18
>KOG0284|consensus
Probab=99.75 E-value=5.1e-18 Score=120.39 Aligned_cols=113 Identities=14% Similarity=0.205 Sum_probs=99.4
Q ss_pred CcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc---
Q psy7062 13 GQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC--- 89 (148)
Q Consensus 13 ~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~--- 89 (148)
...+++|+|+ ...++++++|++|++||.... +..+.+.+|...|.+++|+|....+++++.|..+++||.+++
T Consensus 182 aIRdlafSpn--DskF~t~SdDg~ikiWdf~~~--kee~vL~GHgwdVksvdWHP~kgLiasgskDnlVKlWDprSg~cl 257 (464)
T KOG0284|consen 182 AIRDLAFSPN--DSKFLTCSDDGTIKIWDFRMP--KEERVLRGHGWDVKSVDWHPTKGLIASGSKDNLVKLWDPRSGSCL 257 (464)
T ss_pred hhheeccCCC--CceeEEecCCCeEEEEeccCC--chhheeccCCCCcceeccCCccceeEEccCCceeEeecCCCcchh
Confidence 4578899986 567888899999999999988 667778999999999999999999999999999999999998
Q ss_pred --cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceecc
Q psy7062 90 --FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVAS 135 (148)
Q Consensus 90 --~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~ 135 (148)
+. .-|..+.|+|++++|+++++|. .++++|+++.+....+
T Consensus 258 ~tlh~HKntVl~~~f~~n~N~Llt~skD~------~~kv~DiR~mkEl~~~ 302 (464)
T KOG0284|consen 258 ATLHGHKNTVLAVKFNPNGNWLLTGSKDQ------SCKVFDIRTMKELFTY 302 (464)
T ss_pred hhhhhccceEEEEEEcCCCCeeEEccCCc------eEEEEehhHhHHHHHh
Confidence 22 7799999999999999999988 9999999965554433
No 19
>KOG0302|consensus
Probab=99.74 E-value=4.5e-17 Score=114.75 Aligned_cols=109 Identities=16% Similarity=0.328 Sum_probs=91.1
Q ss_pred cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----
Q psy7062 14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC---- 89 (148)
Q Consensus 14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~---- 89 (148)
...+.|+|.. ..+|++||-|++|++||++.+..+.-...+.|.+.|+-|+|+.+-.+|++|+.||++++||++..
T Consensus 260 VEDLqWSptE-~~vfaScS~DgsIrIWDiRs~~~~~~~~~kAh~sDVNVISWnr~~~lLasG~DdGt~~iwDLR~~~~~~ 338 (440)
T KOG0302|consen 260 VEDLQWSPTE-DGVFASCSCDGSIRIWDIRSGPKKAAVSTKAHNSDVNVISWNRREPLLASGGDDGTLSIWDLRQFKSGQ 338 (440)
T ss_pred hhhhccCCcc-CceEEeeecCceEEEEEecCCCccceeEeeccCCceeeEEccCCcceeeecCCCceEEEEEhhhccCCC
Confidence 3567788876 68999999999999999998743444444789999999999998779999999999999999876
Q ss_pred ----cc---ccceEEEEcc-CCCEEEEEecCCceecCeeEEEeecCCC
Q psy7062 90 ----FI---QQVNALRITP-DKQLLASAEELSCCYCGAAVFVYNSCYP 129 (148)
Q Consensus 90 ----~~---~~i~~~~~sp-~~~~l~~~~~d~~~~~~~~i~~~d~~~~ 129 (148)
|+ .+|.++.|+| +...|++++.|. +|.+||+...
T Consensus 339 pVA~fk~Hk~pItsieW~p~e~s~iaasg~D~------QitiWDlsvE 380 (440)
T KOG0302|consen 339 PVATFKYHKAPITSIEWHPHEDSVIAASGEDN------QITIWDLSVE 380 (440)
T ss_pred cceeEEeccCCeeEEEeccccCceEEeccCCC------cEEEEEeecc
Confidence 43 9999999999 455777778777 8999998743
No 20
>KOG0286|consensus
Probab=99.73 E-value=1.9e-16 Score=108.50 Aligned_cols=109 Identities=18% Similarity=0.237 Sum_probs=96.0
Q ss_pred EEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----c
Q psy7062 16 STVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-----F 90 (148)
Q Consensus 16 ~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-----~ 90 (148)
++++.|. .++.+++|+-|.+.++||++.+ ....+|.+|.+.|.+++|.|+|.-+++|+.|++.++||++.. |
T Consensus 191 slsl~p~-~~ntFvSg~cD~~aklWD~R~~--~c~qtF~ghesDINsv~ffP~G~afatGSDD~tcRlyDlRaD~~~a~y 267 (343)
T KOG0286|consen 191 SLSLSPS-DGNTFVSGGCDKSAKLWDVRSG--QCVQTFEGHESDINSVRFFPSGDAFATGSDDATCRLYDLRADQELAVY 267 (343)
T ss_pred EEecCCC-CCCeEEecccccceeeeeccCc--ceeEeecccccccceEEEccCCCeeeecCCCceeEEEeecCCcEEeee
Confidence 3344453 5899999999999999999998 899999999999999999999999999999999999999985 3
Q ss_pred c-----ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCccee
Q psy7062 91 I-----QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVV 133 (148)
Q Consensus 91 ~-----~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~ 133 (148)
. .++.+++||..|++|+.|-.|. .+.+||.-..+...
T Consensus 268 s~~~~~~gitSv~FS~SGRlLfagy~d~------~c~vWDtlk~e~vg 309 (343)
T KOG0286|consen 268 SHDSIICGITSVAFSKSGRLLFAGYDDF------TCNVWDTLKGERVG 309 (343)
T ss_pred ccCcccCCceeEEEcccccEEEeeecCC------ceeEeeccccceEE
Confidence 3 8899999999999999998877 89999977555443
No 21
>KOG0269|consensus
Probab=99.72 E-value=7e-17 Score=122.05 Aligned_cols=109 Identities=17% Similarity=0.222 Sum_probs=95.5
Q ss_pred cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEcc-CCCEEEEEeCCCcEEEEECCcc---
Q psy7062 14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQE-DGKWMFTGGEDCRARIWDLSLC--- 89 (148)
Q Consensus 14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp-~~~~l~~~~~~~~i~l~d~~~~--- 89 (148)
...+.|++.+ ..+|++|+.|++|++||++.. ....++.+....|..++|+| .+..++++...|.+++||++..
T Consensus 136 ~~~ldfh~te-p~iliSGSQDg~vK~~DlR~~--~S~~t~~~nSESiRDV~fsp~~~~~F~s~~dsG~lqlWDlRqp~r~ 212 (839)
T KOG0269|consen 136 ANKLDFHSTE-PNILISGSQDGTVKCWDLRSK--KSKSTFRSNSESIRDVKFSPGYGNKFASIHDSGYLQLWDLRQPDRC 212 (839)
T ss_pred eeeeeeccCC-ccEEEecCCCceEEEEeeecc--cccccccccchhhhceeeccCCCceEEEecCCceEEEeeccCchhH
Confidence 4567777654 689999999999999999998 77778887788899999999 6789999999999999999987
Q ss_pred ---cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcc
Q psy7062 90 ---FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAA 131 (148)
Q Consensus 90 ---~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~ 131 (148)
|. +++.|+.|+|++.+|++|++|+ +|++||...+..
T Consensus 213 ~~k~~AH~GpV~c~nwhPnr~~lATGGRDK------~vkiWd~t~~~~ 254 (839)
T KOG0269|consen 213 EKKLTAHNGPVLCLNWHPNREWLATGGRDK------MVKIWDMTDSRA 254 (839)
T ss_pred HHHhhcccCceEEEeecCCCceeeecCCCc------cEEEEeccCCCc
Confidence 32 9999999999999999999999 999999886543
No 22
>KOG0319|consensus
Probab=99.72 E-value=1e-16 Score=120.57 Aligned_cols=114 Identities=15% Similarity=0.174 Sum_probs=103.6
Q ss_pred CcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc---
Q psy7062 13 GQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC--- 89 (148)
Q Consensus 13 ~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~--- 89 (148)
..++++++|+ ..++|+||.|.+.++|++++. ..+.++.+|+..+.++.|+|..+.++++|.|.++++|.+.+.
T Consensus 465 dIN~Vaia~n--dkLiAT~SqDktaKiW~le~~--~l~~vLsGH~RGvw~V~Fs~~dq~laT~SgD~TvKIW~is~fSCl 540 (775)
T KOG0319|consen 465 DINCVAIAPN--DKLIATGSQDKTAKIWDLEQL--RLLGVLSGHTRGVWCVSFSKNDQLLATCSGDKTVKIWSISTFSCL 540 (775)
T ss_pred cccceEecCC--CceEEecccccceeeecccCc--eEEEEeeCCccceEEEEeccccceeEeccCCceEEEEEeccceee
Confidence 4688898888 899999999999999999977 889999999999999999999999999999999999999988
Q ss_pred --cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceeccC
Q psy7062 90 --FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVASN 136 (148)
Q Consensus 90 --~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~~ 136 (148)
|. ..+..+.|-.++.+|++++.|| -+++|++.+.....++.
T Consensus 541 kT~eGH~~aVlra~F~~~~~qliS~~adG------liKlWnikt~eC~~tlD 586 (775)
T KOG0319|consen 541 KTFEGHTSAVLRASFIRNGKQLISAGADG------LIKLWNIKTNECEMTLD 586 (775)
T ss_pred eeecCccceeEeeeeeeCCcEEEeccCCC------cEEEEeccchhhhhhhh
Confidence 44 7788899999999999999999 99999999877665543
No 23
>KOG0295|consensus
Probab=99.72 E-value=3.1e-16 Score=110.02 Aligned_cols=115 Identities=18% Similarity=0.243 Sum_probs=89.7
Q ss_pred cCcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeC--------------
Q psy7062 12 FGQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGE-------------- 77 (148)
Q Consensus 12 ~~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~-------------- 77 (148)
++..++.|=|. |+++++++.|.+|++|++.++ -.+.++.+|...|..++.+.||..+++++.
T Consensus 194 h~vS~V~f~P~--gd~ilS~srD~tik~We~~tg--~cv~t~~~h~ewvr~v~v~~DGti~As~s~dqtl~vW~~~t~~~ 269 (406)
T KOG0295|consen 194 HGVSSVFFLPL--GDHILSCSRDNTIKAWECDTG--YCVKTFPGHSEWVRMVRVNQDGTIIASCSNDQTLRVWVVATKQC 269 (406)
T ss_pred cceeeEEEEec--CCeeeecccccceeEEecccc--eeEEeccCchHhEEEEEecCCeeEEEecCCCceEEEEEeccchh
Confidence 34566777777 799999999999999999998 788888888777766666666666666664
Q ss_pred -------------------------------------------CCcEEEEECCcc---cc-----ccceEEEEccCCCEE
Q psy7062 78 -------------------------------------------DCRARIWDLSLC---FI-----QQVNALRITPDKQLL 106 (148)
Q Consensus 78 -------------------------------------------~~~i~l~d~~~~---~~-----~~i~~~~~sp~~~~l 106 (148)
|++|++||+.++ |. .+++.++|+|.|++|
T Consensus 270 k~~lR~hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg~cL~tL~ghdnwVr~~af~p~Gkyi 349 (406)
T KOG0295|consen 270 KAELREHEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTGMCLFTLVGHDNWVRGVAFSPGGKYI 349 (406)
T ss_pred hhhhhccccceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEeccCCeEEEEEecccceeeeeEEcCCCeEE
Confidence 445555555544 22 789999999999999
Q ss_pred EEEecCCceecCeeEEEeecCCCcceeccC
Q psy7062 107 ASAEELSCCYCGAAVFVYNSCYPAAVVASN 136 (148)
Q Consensus 107 ~~~~~d~~~~~~~~i~~~d~~~~~~~~~~~ 136 (148)
+++.+|+ ++++||+.+.+....++
T Consensus 350 ~ScaDDk------tlrvwdl~~~~cmk~~~ 373 (406)
T KOG0295|consen 350 LSCADDK------TLRVWDLKNLQCMKTLE 373 (406)
T ss_pred EEEecCC------cEEEEEeccceeeeccC
Confidence 9999988 99999999877655444
No 24
>KOG0284|consensus
Probab=99.71 E-value=7.2e-17 Score=114.63 Aligned_cols=115 Identities=19% Similarity=0.370 Sum_probs=98.9
Q ss_pred eeecC--cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEEC
Q psy7062 9 LTAFG--QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDL 86 (148)
Q Consensus 9 ~~~~~--~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~ 86 (148)
++.++ ..+++|+|. ..++++++.|..|++||.+++ +++.++.+|+..|..+.|+|++++|+++++|..++++|+
T Consensus 218 L~GHgwdVksvdWHP~--kgLiasgskDnlVKlWDprSg--~cl~tlh~HKntVl~~~f~~n~N~Llt~skD~~~kv~Di 293 (464)
T KOG0284|consen 218 LRGHGWDVKSVDWHPT--KGLIASGSKDNLVKLWDPRSG--SCLATLHGHKNTVLAVKFNPNGNWLLTGSKDQSCKVFDI 293 (464)
T ss_pred eccCCCCcceeccCCc--cceeEEccCCceeEeecCCCc--chhhhhhhccceEEEEEEcCCCCeeEEccCCceEEEEeh
Confidence 34454 467888887 789999999999999999999 999999999999999999999999999999999999999
Q ss_pred Ccc-----cc---ccceEEEEcc-CCCEEEEEecCCceecCeeEEEeecCCCccee
Q psy7062 87 SLC-----FI---QQVNALRITP-DKQLLASAEELSCCYCGAAVFVYNSCYPAAVV 133 (148)
Q Consensus 87 ~~~-----~~---~~i~~~~~sp-~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~ 133 (148)
++. ++ ..++++.|+| ....|.+++.|+ .|..|.+....+..
T Consensus 294 R~mkEl~~~r~Hkkdv~~~~WhP~~~~lftsgg~Dg------svvh~~v~~~~p~~ 343 (464)
T KOG0284|consen 294 RTMKELFTYRGHKKDVTSLTWHPLNESLFTSGGSDG------SVVHWVVGLEEPLG 343 (464)
T ss_pred hHhHHHHHhhcchhhheeeccccccccceeeccCCC------ceEEEecccccccc
Confidence 965 33 7799999999 677888899988 88888876444433
No 25
>KOG0283|consensus
Probab=99.71 E-value=1e-16 Score=121.59 Aligned_cols=102 Identities=16% Similarity=0.202 Sum_probs=90.8
Q ss_pred ccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEcc-CCCEEEEEeCCCcEEEEECCcc-------ccccceE
Q psy7062 25 VEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQE-DGKWMFTGGEDCRARIWDLSLC-------FIQQVNA 96 (148)
Q Consensus 25 ~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp-~~~~l~~~~~~~~i~l~d~~~~-------~~~~i~~ 96 (148)
+++|.+++.|.+||+|++... .++..|. |...|+|++|+| |.+++++|+.|++++||++... +..-|++
T Consensus 380 n~fLLSSSMDKTVRLWh~~~~--~CL~~F~-HndfVTcVaFnPvDDryFiSGSLD~KvRiWsI~d~~Vv~W~Dl~~lITA 456 (712)
T KOG0283|consen 380 NNFLLSSSMDKTVRLWHPGRK--ECLKVFS-HNDFVTCVAFNPVDDRYFISGSLDGKVRLWSISDKKVVDWNDLRDLITA 456 (712)
T ss_pred CCeeEeccccccEEeecCCCc--ceeeEEe-cCCeeEEEEecccCCCcEeecccccceEEeecCcCeeEeehhhhhhhee
Confidence 577888899999999999988 8999997 999999999999 8899999999999999999877 2277999
Q ss_pred EEEccCCCEEEEEecCCceecCeeEEEeecCCCcceecc
Q psy7062 97 LRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVAS 135 (148)
Q Consensus 97 ~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~ 135 (148)
++|.|+|+..+.|+.+| .+++|+....+.....
T Consensus 457 vcy~PdGk~avIGt~~G------~C~fY~t~~lk~~~~~ 489 (712)
T KOG0283|consen 457 VCYSPDGKGAVIGTFNG------YCRFYDTEGLKLVSDF 489 (712)
T ss_pred EEeccCCceEEEEEecc------EEEEEEccCCeEEEee
Confidence 99999999999999988 8999998866655443
No 26
>KOG0291|consensus
Probab=99.71 E-value=5.1e-16 Score=117.38 Aligned_cols=121 Identities=17% Similarity=0.264 Sum_probs=105.6
Q ss_pred cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----
Q psy7062 14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC---- 89 (148)
Q Consensus 14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~---- 89 (148)
..+++|+|+ |+++++|++|+.|++||..++ -+..+|..|++.|+.+.|+..|+.+++.+.||+++.||++..
T Consensus 353 i~~l~YSpD--gq~iaTG~eDgKVKvWn~~Sg--fC~vTFteHts~Vt~v~f~~~g~~llssSLDGtVRAwDlkRYrNfR 428 (893)
T KOG0291|consen 353 ITSLAYSPD--GQLIATGAEDGKVKVWNTQSG--FCFVTFTEHTSGVTAVQFTARGNVLLSSSLDGTVRAWDLKRYRNFR 428 (893)
T ss_pred eeeEEECCC--CcEEEeccCCCcEEEEeccCc--eEEEEeccCCCceEEEEEEecCCEEEEeecCCeEEeeeecccceee
Confidence 478889998 999999999999999999998 899999999999999999999999999999999999999876
Q ss_pred -cc----ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceeccCcccCcce
Q psy7062 90 -FI----QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVASNTLVKPQV 143 (148)
Q Consensus 90 -~~----~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~ 143 (148)
|. ....|++..|.|..+..|+.|. ..|++|+..+++....+.++-.|-.
T Consensus 429 Tft~P~p~QfscvavD~sGelV~AG~~d~-----F~IfvWS~qTGqllDiLsGHEgPVs 482 (893)
T KOG0291|consen 429 TFTSPEPIQFSCVAVDPSGELVCAGAQDS-----FEIFVWSVQTGQLLDILSGHEGPVS 482 (893)
T ss_pred eecCCCceeeeEEEEcCCCCEEEeeccce-----EEEEEEEeecCeeeehhcCCCCcce
Confidence 33 5567788888899888887744 3699999999988777776666643
No 27
>KOG0291|consensus
Probab=99.71 E-value=2.8e-16 Score=118.77 Aligned_cols=112 Identities=21% Similarity=0.245 Sum_probs=98.1
Q ss_pred EEEEEeCCCCccEEEEEecCC-eEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----
Q psy7062 15 ISTVFDSKHLVEMVAALGGYQ-HIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC---- 89 (148)
Q Consensus 15 ~~~~~~~~~~~~~l~~~~~d~-~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~---- 89 (148)
.+++.||. |++++.|+.|. .|.+|+++++ +.+..+.+|.+.|.+++|+|++..|+++++|.++++||+-..
T Consensus 439 scvavD~s--GelV~AG~~d~F~IfvWS~qTG--qllDiLsGHEgPVs~l~f~~~~~~LaS~SWDkTVRiW~if~s~~~v 514 (893)
T KOG0291|consen 439 SCVAVDPS--GELVCAGAQDSFEIFVWSVQTG--QLLDILSGHEGPVSGLSFSPDGSLLASGSWDKTVRIWDIFSSSGTV 514 (893)
T ss_pred eEEEEcCC--CCEEEeeccceEEEEEEEeecC--eeeehhcCCCCcceeeEEccccCeEEeccccceEEEEEeeccCcee
Confidence 46666776 99999988877 6999999999 899999999999999999999999999999999999999765
Q ss_pred --cc--ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceeccC
Q psy7062 90 --FI--QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVASN 136 (148)
Q Consensus 90 --~~--~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~~ 136 (148)
++ ..+..+.|+|+|+.|+++.-|| .|.+||.........++
T Consensus 515 Etl~i~sdvl~vsfrPdG~elaVaTldg------qItf~d~~~~~q~~~Id 559 (893)
T KOG0291|consen 515 ETLEIRSDVLAVSFRPDGKELAVATLDG------QITFFDIKEAVQVGSID 559 (893)
T ss_pred eeEeeccceeEEEEcCCCCeEEEEEecc------eEEEEEhhhceeecccc
Confidence 33 7799999999999999999988 99999988665554443
No 28
>KOG0315|consensus
Probab=99.70 E-value=7.6e-16 Score=103.68 Aligned_cols=121 Identities=16% Similarity=0.160 Sum_probs=105.0
Q ss_pred EEEEEeCCCCccEEEEEecCCeEEEEeCCCCC----CCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-
Q psy7062 15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNN----PNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC- 89 (148)
Q Consensus 15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~----~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~- 89 (148)
..+...++ |.+++.+...|.+.+|++-+.. .+++..++.|...+..+.+|||+++|++++.|.++++|+....
T Consensus 171 ~sl~v~~d--gsml~a~nnkG~cyvW~l~~~~~~s~l~P~~k~~ah~~~il~C~lSPd~k~lat~ssdktv~iwn~~~~~ 248 (311)
T KOG0315|consen 171 QSLTVMPD--GSMLAAANNKGNCYVWRLLNHQTASELEPVHKFQAHNGHILRCLLSPDVKYLATCSSDKTVKIWNTDDFF 248 (311)
T ss_pred eeEEEcCC--CcEEEEecCCccEEEEEccCCCccccceEhhheecccceEEEEEECCCCcEEEeecCCceEEEEecCCce
Confidence 34445566 9999999999999999997542 1356678889999999999999999999999999999999887
Q ss_pred -----cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceeccCcccCcce
Q psy7062 90 -----FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVASNTLVKPQV 143 (148)
Q Consensus 90 -----~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~ 143 (148)
++ .+++..+||.|+++|++++.|. .+++||++..+.+..+.+.+++.+
T Consensus 249 kle~~l~gh~rWvWdc~FS~dg~YlvTassd~------~~rlW~~~~~k~v~qy~gh~K~~v 304 (311)
T KOG0315|consen 249 KLELVLTGHQRWVWDCAFSADGEYLVTASSDH------TARLWDLSAGKEVRQYQGHHKAAV 304 (311)
T ss_pred eeEEEeecCCceEEeeeeccCccEEEecCCCC------ceeecccccCceeeecCCcccccE
Confidence 22 5899999999999999999988 999999999999999999988865
No 29
>KOG1446|consensus
Probab=99.70 E-value=1.8e-15 Score=104.32 Aligned_cols=125 Identities=20% Similarity=0.246 Sum_probs=104.5
Q ss_pred ccceeeecCcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecC---CCCCEEEEEEccCCCEEEEEeCCCcE
Q psy7062 5 LGGILTAFGQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEG---VSKNVVEVGFQEDGKWMFTGGEDCRA 81 (148)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~---~~~~i~~~~~sp~~~~l~~~~~~~~i 81 (148)
-.|++...+.+++||||. |-++|++.....|++||++.....+..++.- ....++.+.|||||+.++.++..+.+
T Consensus 134 cqg~l~~~~~pi~AfDp~--GLifA~~~~~~~IkLyD~Rs~dkgPF~tf~i~~~~~~ew~~l~FS~dGK~iLlsT~~s~~ 211 (311)
T KOG1446|consen 134 CQGLLNLSGRPIAAFDPE--GLIFALANGSELIKLYDLRSFDKGPFTTFSITDNDEAEWTDLEFSPDGKSILLSTNASFI 211 (311)
T ss_pred CceEEecCCCcceeECCC--CcEEEEecCCCeEEEEEecccCCCCceeEccCCCCccceeeeEEcCCCCEEEEEeCCCcE
Confidence 467888899999999999 8999998877799999999764455555543 36789999999999999999999999
Q ss_pred EEEECCcc-----cc------ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceeccCc
Q psy7062 82 RIWDLSLC-----FI------QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVASNT 137 (148)
Q Consensus 82 ~l~d~~~~-----~~------~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~~~ 137 (148)
++.|.-++ |. .-.....|+||++++++++.|| +|.+|+++++..+....+
T Consensus 212 ~~lDAf~G~~~~tfs~~~~~~~~~~~a~ftPds~Fvl~gs~dg------~i~vw~~~tg~~v~~~~~ 272 (311)
T KOG1446|consen 212 YLLDAFDGTVKSTFSGYPNAGNLPLSATFTPDSKFVLSGSDDG------TIHVWNLETGKKVAVLRG 272 (311)
T ss_pred EEEEccCCcEeeeEeeccCCCCcceeEEECCCCcEEEEecCCC------cEEEEEcCCCcEeeEecC
Confidence 99999888 22 2235678999999999999999 999999998877766655
No 30
>KOG0277|consensus
Probab=99.70 E-value=2.8e-16 Score=105.97 Aligned_cols=114 Identities=18% Similarity=0.324 Sum_probs=94.9
Q ss_pred CcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEcc-CCCEEEEEeCCCcEEEEECCcc--
Q psy7062 13 GQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQE-DGKWMFTGGEDCRARIWDLSLC-- 89 (148)
Q Consensus 13 ~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp-~~~~l~~~~~~~~i~l~d~~~~-- 89 (148)
+-..++|+++... .+++++.||++++||..-+ ..++..++.|...|.++.|++ +...++++++|++|++||...+
T Consensus 62 ~LfdV~Wse~~e~-~~~~a~GDGSLrl~d~~~~-s~Pi~~~kEH~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~~S 139 (311)
T KOG0277|consen 62 GLFDVAWSENHEN-QVIAASGDGSLRLFDLTMP-SKPIHKFKEHKREVYSVDWNTVRRRIFLTSSWDGTIKLWDPNRPNS 139 (311)
T ss_pred ceeEeeecCCCcc-eEEEEecCceEEEeccCCC-CcchhHHHhhhhheEEeccccccceeEEeeccCCceEeecCCCCcc
Confidence 4567888887754 4555599999999996543 468899999999999999998 5667888899999999999876
Q ss_pred ---cc---ccceEEEEcc-CCCEEEEEecCCceecCeeEEEeecCCCcceec
Q psy7062 90 ---FI---QQVNALRITP-DKQLLASAEELSCCYCGAAVFVYNSCYPAAVVA 134 (148)
Q Consensus 90 ---~~---~~i~~~~~sp-~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~ 134 (148)
|. ..|...+|+| .+..+++++.|+ .+++||++.+.....
T Consensus 140 v~Tf~gh~~~Iy~a~~sp~~~nlfas~Sgd~------~l~lwdvr~~gk~~~ 185 (311)
T KOG0277|consen 140 VQTFNGHNSCIYQAAFSPHIPNLFASASGDG------TLRLWDVRSPGKFMS 185 (311)
T ss_pred eEeecCCccEEEEEecCCCCCCeEEEccCCc------eEEEEEecCCCceeE
Confidence 44 7789999999 678999999988 999999998765444
No 31
>PTZ00421 coronin; Provisional
Probab=99.70 E-value=1.6e-15 Score=114.05 Aligned_cols=112 Identities=13% Similarity=0.142 Sum_probs=90.0
Q ss_pred EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----
Q psy7062 15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC----- 89 (148)
Q Consensus 15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~----- 89 (148)
.+++|+|.. +++|++++.|++|++||++++ +.+..+.+|...|.+++|+|+|..+++++.|+++++||++++
T Consensus 129 ~~l~f~P~~-~~iLaSgs~DgtVrIWDl~tg--~~~~~l~~h~~~V~sla~spdG~lLatgs~Dg~IrIwD~rsg~~v~t 205 (493)
T PTZ00421 129 GIVSFHPSA-MNVLASAGADMVVNVWDVERG--KAVEVIKCHSDQITSLEWNLDGSLLCTTSKDKKLNIIDPRDGTIVSS 205 (493)
T ss_pred EEEEeCcCC-CCEEEEEeCCCEEEEEECCCC--eEEEEEcCCCCceEEEEEECCCCEEEEecCCCEEEEEECCCCcEEEE
Confidence 567788763 468999999999999999988 778888899999999999999999999999999999999987
Q ss_pred cc----ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcc
Q psy7062 90 FI----QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAA 131 (148)
Q Consensus 90 ~~----~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~ 131 (148)
+. .....+.|.+++..+++++.++ .....|++||+++...
T Consensus 206 l~~H~~~~~~~~~w~~~~~~ivt~G~s~--s~Dr~VklWDlr~~~~ 249 (493)
T PTZ00421 206 VEAHASAKSQRCLWAKRKDLIITLGCSK--SQQRQIMLWDTRKMAS 249 (493)
T ss_pred EecCCCCcceEEEEcCCCCeEEEEecCC--CCCCeEEEEeCCCCCC
Confidence 22 2344678999887777765321 0123899999987653
No 32
>KOG0282|consensus
Probab=99.70 E-value=1.8e-17 Score=119.59 Aligned_cols=118 Identities=12% Similarity=0.184 Sum_probs=101.7
Q ss_pred EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----
Q psy7062 15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC----- 89 (148)
Q Consensus 15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~----- 89 (148)
.++-|.|.. +.+|++++.|+.|++|++-.. .+.++++.+|...|..++|+++|.-+++++.|+.+++||.+++
T Consensus 218 sai~~fp~~-~hLlLS~gmD~~vklW~vy~~-~~~lrtf~gH~k~Vrd~~~s~~g~~fLS~sfD~~lKlwDtETG~~~~~ 295 (503)
T KOG0282|consen 218 SAIQWFPKK-GHLLLSGGMDGLVKLWNVYDD-RRCLRTFKGHRKPVRDASFNNCGTSFLSASFDRFLKLWDTETGQVLSR 295 (503)
T ss_pred chhhhccce-eeEEEecCCCceEEEEEEecC-cceehhhhcchhhhhhhhccccCCeeeeeecceeeeeeccccceEEEE
Confidence 455556633 899999999999999999872 3899999999999999999999999999999999999999999
Q ss_pred cc--ccceEEEEccCC-CEEEEEecCCceecCeeEEEeecCCCcceeccCcccC
Q psy7062 90 FI--QQVNALRITPDK-QLLASAEELSCCYCGAAVFVYNSCYPAAVVASNTLVK 140 (148)
Q Consensus 90 ~~--~~i~~~~~sp~~-~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~~~~~~ 140 (148)
|. ..+.|+.|+|++ +.+++|+.|+ +|+-||+++++.++.+...+.
T Consensus 296 f~~~~~~~cvkf~pd~~n~fl~G~sd~------ki~~wDiRs~kvvqeYd~hLg 343 (503)
T KOG0282|consen 296 FHLDKVPTCVKFHPDNQNIFLVGGSDK------KIRQWDIRSGKVVQEYDRHLG 343 (503)
T ss_pred EecCCCceeeecCCCCCcEEEEecCCC------cEEEEeccchHHHHHHHhhhh
Confidence 44 778999999988 6888888888 999999999887766655444
No 33
>KOG0275|consensus
Probab=99.69 E-value=4.4e-17 Score=113.48 Aligned_cols=107 Identities=21% Similarity=0.244 Sum_probs=96.8
Q ss_pred cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEec-CCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc---
Q psy7062 14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCE-GVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC--- 89 (148)
Q Consensus 14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~-~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~--- 89 (148)
..|..|+.+ .++|++|+.||.|++|.++++ .+++.|. +|+..|+++.||.|+..+++++.|.++++.-++++
T Consensus 266 Vlci~FSRD--sEMlAsGsqDGkIKvWri~tG--~ClRrFdrAHtkGvt~l~FSrD~SqiLS~sfD~tvRiHGlKSGK~L 341 (508)
T KOG0275|consen 266 VLCISFSRD--SEMLASGSQDGKIKVWRIETG--QCLRRFDRAHTKGVTCLSFSRDNSQILSASFDQTVRIHGLKSGKCL 341 (508)
T ss_pred eEEEeeccc--HHHhhccCcCCcEEEEEEecc--hHHHHhhhhhccCeeEEEEccCcchhhcccccceEEEeccccchhH
Confidence 456666666 899999999999999999999 8998887 89999999999999999999999999999999998
Q ss_pred --cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062 90 --FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA 130 (148)
Q Consensus 90 --~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~ 130 (148)
|. +.++...|+++|..+++++.|| +|++|+..+..
T Consensus 342 KEfrGHsSyvn~a~ft~dG~~iisaSsDg------tvkvW~~Ktte 381 (508)
T KOG0275|consen 342 KEFRGHSSYVNEATFTDDGHHIISASSDG------TVKVWHGKTTE 381 (508)
T ss_pred HHhcCccccccceEEcCCCCeEEEecCCc------cEEEecCcchh
Confidence 33 7799999999999999999999 99999976544
No 34
>KOG0316|consensus
Probab=99.68 E-value=1.2e-15 Score=102.19 Aligned_cols=107 Identities=17% Similarity=0.289 Sum_probs=98.2
Q ss_pred cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----
Q psy7062 14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC---- 89 (148)
Q Consensus 14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~---- 89 (148)
..++.|.-+ |++.++++.|.++++|+...+ ..+.++.+|...|..++.+.|...+++|+.|..+.+||..++
T Consensus 20 V~avryN~d--GnY~ltcGsdrtvrLWNp~rg--~liktYsghG~EVlD~~~s~Dnskf~s~GgDk~v~vwDV~TGkv~R 95 (307)
T KOG0316|consen 20 VRAVRYNVD--GNYCLTCGSDRTVRLWNPLRG--ALIKTYSGHGHEVLDAALSSDNSKFASCGGDKAVQVWDVNTGKVDR 95 (307)
T ss_pred eEEEEEccC--CCEEEEcCCCceEEeeccccc--ceeeeecCCCceeeeccccccccccccCCCCceEEEEEcccCeeee
Confidence 356667776 999999999999999999988 899999999999999999999999999999999999999998
Q ss_pred -cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062 90 -FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA 130 (148)
Q Consensus 90 -~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~ 130 (148)
|. +.++.++|+.+...+++|+.|. ++++||.++..
T Consensus 96 r~rgH~aqVNtV~fNeesSVv~SgsfD~------s~r~wDCRS~s 134 (307)
T KOG0316|consen 96 RFRGHLAQVNTVRFNEESSVVASGSFDS------SVRLWDCRSRS 134 (307)
T ss_pred ecccccceeeEEEecCcceEEEeccccc------eeEEEEcccCC
Confidence 44 8899999999999999999988 99999988653
No 35
>KOG0316|consensus
Probab=99.68 E-value=9.3e-16 Score=102.64 Aligned_cols=122 Identities=14% Similarity=0.162 Sum_probs=99.9
Q ss_pred eeeecCcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECC
Q psy7062 8 ILTAFGQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLS 87 (148)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~ 87 (148)
-..-+++.....+...++..+++|+.|..+.+||++++ +.++.+.+|...|+.+.|+-+...+++|+.|..+++||.+
T Consensus 54 tYsghG~EVlD~~~s~Dnskf~s~GgDk~v~vwDV~TG--kv~Rr~rgH~aqVNtV~fNeesSVv~SgsfD~s~r~wDCR 131 (307)
T KOG0316|consen 54 TYSGHGHEVLDAALSSDNSKFASCGGDKAVQVWDVNTG--KVDRRFRGHLAQVNTVRFNEESSVVASGSFDSSVRLWDCR 131 (307)
T ss_pred eecCCCceeeeccccccccccccCCCCceEEEEEcccC--eeeeecccccceeeEEEecCcceEEEeccccceeEEEEcc
Confidence 34566777777776666888999999999999999999 9999999999999999999999999999999999999998
Q ss_pred cc-------c-----------------------------------------cccceEEEEccCCCEEEEEecCCceecCe
Q psy7062 88 LC-------F-----------------------------------------IQQVNALRITPDKQLLASAEELSCCYCGA 119 (148)
Q Consensus 88 ~~-------~-----------------------------------------~~~i~~~~~sp~~~~l~~~~~d~~~~~~~ 119 (148)
+. | ..+|+++.|+++++..+.++-|+
T Consensus 132 S~s~ePiQildea~D~V~Si~v~~heIvaGS~DGtvRtydiR~G~l~sDy~g~pit~vs~s~d~nc~La~~l~s------ 205 (307)
T KOG0316|consen 132 SRSFEPIQILDEAKDGVSSIDVAEHEIVAGSVDGTVRTYDIRKGTLSSDYFGHPITSVSFSKDGNCSLASSLDS------ 205 (307)
T ss_pred cCCCCccchhhhhcCceeEEEecccEEEeeccCCcEEEEEeecceeehhhcCCcceeEEecCCCCEEEEeeccc------
Confidence 76 0 06777788888887777777766
Q ss_pred eEEEeecCCCcceeccCc
Q psy7062 120 AVFVYNSCYPAAVVASNT 137 (148)
Q Consensus 120 ~i~~~d~~~~~~~~~~~~ 137 (148)
++++.|-.+.+....+.+
T Consensus 206 tlrLlDk~tGklL~sYkG 223 (307)
T KOG0316|consen 206 TLRLLDKETGKLLKSYKG 223 (307)
T ss_pred eeeecccchhHHHHHhcc
Confidence 777777666555444433
No 36
>KOG0647|consensus
Probab=99.67 E-value=1.3e-15 Score=104.88 Aligned_cols=112 Identities=20% Similarity=0.306 Sum_probs=92.7
Q ss_pred cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCce-EEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc---
Q psy7062 14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPV-INCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC--- 89 (148)
Q Consensus 14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~-~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~--- 89 (148)
...++|+|. ...+++.+|-|++||+|+++... ..+ .....|.+.+.+++|+.||..+++++.|+.+++||+.++
T Consensus 30 IS~l~FSP~-~~~~~~A~SWD~tVR~wevq~~g-~~~~ka~~~~~~PvL~v~WsddgskVf~g~~Dk~~k~wDL~S~Q~~ 107 (347)
T KOG0647|consen 30 ISALAFSPQ-ADNLLAAGSWDGTVRIWEVQNSG-QLVPKAQQSHDGPVLDVCWSDDGSKVFSGGCDKQAKLWDLASGQVS 107 (347)
T ss_pred hheeEeccc-cCceEEecccCCceEEEEEecCC-cccchhhhccCCCeEEEEEccCCceEEeeccCCceEEEEccCCCee
Confidence 568899993 36778788999999999998731 222 334468999999999999999999999999999999988
Q ss_pred -cc---ccceEEEEccCC--CEEEEEecCCceecCeeEEEeecCCCccee
Q psy7062 90 -FI---QQVNALRITPDK--QLLASAEELSCCYCGAAVFVYNSCYPAAVV 133 (148)
Q Consensus 90 -~~---~~i~~~~~sp~~--~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~ 133 (148)
+. .++..+.|-+.. +.|++|+.|. +|++||.+.+.++.
T Consensus 108 ~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDK------TlKfWD~R~~~pv~ 151 (347)
T KOG0647|consen 108 QVAAHDAPVKTCHWVPGMNYQCLVTGSWDK------TLKFWDTRSSNPVA 151 (347)
T ss_pred eeeecccceeEEEEecCCCcceeEeccccc------ceeecccCCCCeee
Confidence 22 889999998754 4899999988 99999999776654
No 37
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.67 E-value=4.8e-15 Score=117.48 Aligned_cols=107 Identities=15% Similarity=0.258 Sum_probs=92.4
Q ss_pred EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEcc-CCCEEEEEeCCCcEEEEECCcc----
Q psy7062 15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQE-DGKWMFTGGEDCRARIWDLSLC---- 89 (148)
Q Consensus 15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp-~~~~l~~~~~~~~i~l~d~~~~---- 89 (148)
..++|++.. +.+|++++.|++|++||+.++ +.+..+.+|...|.+++|+| ++..+++++.|+++++||+++.
T Consensus 536 ~~l~~~~~~-~~~las~~~Dg~v~lWd~~~~--~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~~ 612 (793)
T PLN00181 536 SGICWNSYI-KSQVASSNFEGVVQVWDVARS--QLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIG 612 (793)
T ss_pred eeEEeccCC-CCEEEEEeCCCeEEEEECCCC--eEEEEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEEE
Confidence 456666543 678999999999999999987 78888899999999999997 7899999999999999999876
Q ss_pred -cc--ccceEEEEc-cCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062 90 -FI--QQVNALRIT-PDKQLLASAEELSCCYCGAAVFVYNSCYPA 130 (148)
Q Consensus 90 -~~--~~i~~~~~s-p~~~~l~~~~~d~~~~~~~~i~~~d~~~~~ 130 (148)
+. ..+.++.|+ +++..|++|+.|+ .|++||+++..
T Consensus 613 ~~~~~~~v~~v~~~~~~g~~latgs~dg------~I~iwD~~~~~ 651 (793)
T PLN00181 613 TIKTKANICCVQFPSESGRSLAFGSADH------KVYYYDLRNPK 651 (793)
T ss_pred EEecCCCeEEEEEeCCCCCEEEEEeCCC------eEEEEECCCCC
Confidence 22 678899996 4799999999988 99999998654
No 38
>KOG0264|consensus
Probab=99.67 E-value=9e-16 Score=109.90 Aligned_cols=111 Identities=21% Similarity=0.314 Sum_probs=93.0
Q ss_pred cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEcc-CCCEEEEEeCCCcEEEEECCcc---
Q psy7062 14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQE-DGKWMFTGGEDCRARIWDLSLC--- 89 (148)
Q Consensus 14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp-~~~~l~~~~~~~~i~l~d~~~~--- 89 (148)
.+.++|++.+ ..+++++++|+.+.+||.++...++.....+|+..+.+++|+| ++..|++|+.|+++.|||+|+.
T Consensus 230 VeDV~~h~~h-~~lF~sv~dd~~L~iwD~R~~~~~~~~~~~ah~~~vn~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~~~ 308 (422)
T KOG0264|consen 230 VEDVAWHPLH-EDLFGSVGDDGKLMIWDTRSNTSKPSHSVKAHSAEVNCVAFNPFNEFILATGSADKTVALWDLRNLNKP 308 (422)
T ss_pred eehhhccccc-hhhheeecCCCeEEEEEcCCCCCCCcccccccCCceeEEEeCCCCCceEEeccCCCcEEEeechhcccC
Confidence 4567777765 6788888999999999999532366777889999999999999 5668899999999999999987
Q ss_pred ---cc---ccceEEEEccC-CCEEEEEecCCceecCeeEEEeecCCCcc
Q psy7062 90 ---FI---QQVNALRITPD-KQLLASAEELSCCYCGAAVFVYNSCYPAA 131 (148)
Q Consensus 90 ---~~---~~i~~~~~sp~-~~~l~~~~~d~~~~~~~~i~~~d~~~~~~ 131 (148)
|. ..+.++.|+|+ ...|++++.|+ ++.+||+..-..
T Consensus 309 lh~~e~H~dev~~V~WSPh~etvLASSg~D~------rl~vWDls~ig~ 351 (422)
T KOG0264|consen 309 LHTFEGHEDEVFQVEWSPHNETVLASSGTDR------RLNVWDLSRIGE 351 (422)
T ss_pred ceeccCCCcceEEEEeCCCCCceeEecccCC------cEEEEecccccc
Confidence 33 88999999995 56888999988 999999875443
No 39
>KOG0640|consensus
Probab=99.67 E-value=1.3e-15 Score=105.53 Aligned_cols=110 Identities=15% Similarity=0.262 Sum_probs=95.0
Q ss_pred EEEEEeCCCCccEEEEEecCCeEEEEeCCC----------------CCCCceEEecCCCCCEEEEEEccCCCEEEEEeCC
Q psy7062 15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGS----------------NNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGED 78 (148)
Q Consensus 15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~----------------~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~ 78 (148)
.+.+|+++ |.++++|+.|-+|+++|++. .....++++..|...|+.+.|+|....|+++++|
T Consensus 116 R~aafs~D--G~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~l~FHPre~ILiS~srD 193 (430)
T KOG0640|consen 116 RAAAFSPD--GSLVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVNDLDFHPRETILISGSRD 193 (430)
T ss_pred eeeeeCCC--CcEEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCcccceeecchhheEEeccCC
Confidence 46677787 99999999999999999971 1124578888999999999999999999999999
Q ss_pred CcEEEEECCcc--------cc--ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcce
Q psy7062 79 CRARIWDLSLC--------FI--QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAV 132 (148)
Q Consensus 79 ~~i~l~d~~~~--------~~--~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~ 132 (148)
+++++||+... |+ .+++++.|+|.|.+|+.|.... .+++||+.+.+..
T Consensus 194 ~tvKlFDfsK~saKrA~K~~qd~~~vrsiSfHPsGefllvgTdHp------~~rlYdv~T~Qcf 251 (430)
T KOG0640|consen 194 NTVKLFDFSKTSAKRAFKVFQDTEPVRSISFHPSGEFLLVGTDHP------TLRLYDVNTYQCF 251 (430)
T ss_pred CeEEEEecccHHHHHHHHHhhccceeeeEeecCCCceEEEecCCC------ceeEEeccceeEe
Confidence 99999999765 33 8899999999999999999855 8999999876643
No 40
>KOG0772|consensus
Probab=99.67 E-value=2.7e-16 Score=114.74 Aligned_cols=112 Identities=16% Similarity=0.202 Sum_probs=89.6
Q ss_pred cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEec-----CCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCc
Q psy7062 14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCE-----GVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSL 88 (148)
Q Consensus 14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~-----~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~ 88 (148)
..+.+|+|... +.+.+++.|+++++||++..+ +.+..+. +-.-.++.++|+|||++++.|+.||.|.+||..+
T Consensus 271 lt~g~whP~~k-~~FlT~s~DgtlRiWdv~~~k-~q~qVik~k~~~g~Rv~~tsC~~nrdg~~iAagc~DGSIQ~W~~~~ 348 (641)
T KOG0772|consen 271 LTCGCWHPDNK-EEFLTCSYDGTLRIWDVNNTK-SQLQVIKTKPAGGKRVPVTSCAWNRDGKLIAAGCLDGSIQIWDKGS 348 (641)
T ss_pred eeccccccCcc-cceEEecCCCcEEEEecCCch-hheeEEeeccCCCcccCceeeecCCCcchhhhcccCCceeeeecCC
Confidence 35778888864 555666999999999998762 3333332 1234578889999999999999999999999866
Q ss_pred c-------cc------ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCccee
Q psy7062 89 C-------FI------QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVV 133 (148)
Q Consensus 89 ~-------~~------~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~ 133 (148)
. +. ..|.|+.||++|++|++-+.|+ ++++||+++...+.
T Consensus 349 ~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~D~------tLKvWDLrq~kkpL 400 (641)
T KOG0772|consen 349 RTVRPVMKVKDAHLPGQDITSISFSYDGNYLLSRGFDD------TLKVWDLRQFKKPL 400 (641)
T ss_pred cccccceEeeeccCCCCceeEEEeccccchhhhccCCC------ceeeeeccccccch
Confidence 5 11 5899999999999999999988 99999999876543
No 41
>KOG0645|consensus
Probab=99.66 E-value=8.9e-15 Score=99.46 Aligned_cols=119 Identities=16% Similarity=0.239 Sum_probs=94.2
Q ss_pred ccceeeecCcE----EEEEeCCCCccEEEEEecCCeEEEEeCCCCCC-CceEEe-cCCCCCEEEEEEccCCCEEEEEeCC
Q psy7062 5 LGGILTAFGQI----STVFDSKHLVEMVAALGGYQHIRMYDFGSNNP-NPVINC-EGVSKNVVEVGFQEDGKWMFTGGED 78 (148)
Q Consensus 5 ~~~~~~~~~~~----~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~-~~~~~~-~~~~~~i~~~~~sp~~~~l~~~~~~ 78 (148)
|..+.+..++. .++|+|-. |.+|++++.|+.|++|+...+.. .....+ .+|+..|..++|+|.|++|++++.|
T Consensus 4 l~~~~~~~gh~~r~W~~awhp~~-g~ilAscg~Dk~vriw~~~~~~s~~ck~vld~~hkrsVRsvAwsp~g~~La~aSFD 82 (312)
T KOG0645|consen 4 LILEQKLSGHKDRVWSVAWHPGK-GVILASCGTDKAVRIWSTSSGDSWTCKTVLDDGHKRSVRSVAWSPHGRYLASASFD 82 (312)
T ss_pred ceeEEeecCCCCcEEEEEeccCC-ceEEEeecCCceEEEEecCCCCcEEEEEeccccchheeeeeeecCCCcEEEEeecc
Confidence 44455555554 46666643 67999999999999999985411 222222 3689999999999999999999999
Q ss_pred CcEEEEECCcc-c------c---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062 79 CRARIWDLSLC-F------I---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA 130 (148)
Q Consensus 79 ~~i~l~d~~~~-~------~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~ 130 (148)
.++-+|.=..+ | + ..+.+++|+++|.+|+++++|. .|-+|.+....
T Consensus 83 ~t~~Iw~k~~~efecv~~lEGHEnEVK~Vaws~sG~~LATCSRDK------SVWiWe~dedd 138 (312)
T KOG0645|consen 83 ATVVIWKKEDGEFECVATLEGHENEVKCVAWSASGNYLATCSRDK------SVWIWEIDEDD 138 (312)
T ss_pred ceEEEeecCCCceeEEeeeeccccceeEEEEcCCCCEEEEeeCCC------eEEEEEecCCC
Confidence 99999987766 3 3 8899999999999999999988 99999887443
No 42
>KOG0645|consensus
Probab=99.66 E-value=5.7e-15 Score=100.38 Aligned_cols=106 Identities=19% Similarity=0.231 Sum_probs=95.4
Q ss_pred cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----
Q psy7062 14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC---- 89 (148)
Q Consensus 14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~---- 89 (148)
...+||.|. |++|++|+-|.++.+|.-..+.-+.+..+++|...|.+++|+++|++|+++++|..+.+|.+...
T Consensus 64 VRsvAwsp~--g~~La~aSFD~t~~Iw~k~~~efecv~~lEGHEnEVK~Vaws~sG~~LATCSRDKSVWiWe~deddEfe 141 (312)
T KOG0645|consen 64 VRSVAWSPH--GRYLASASFDATVVIWKKEDGEFECVATLEGHENEVKCVAWSASGNYLATCSRDKSVWIWEIDEDDEFE 141 (312)
T ss_pred eeeeeecCC--CcEEEEeeccceEEEeecCCCceeEEeeeeccccceeEEEEcCCCCEEEEeeCCCeEEEEEecCCCcEE
Confidence 467888888 89999999999999998876655788999999999999999999999999999999999999854
Q ss_pred ----cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecC
Q psy7062 90 ----FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSC 127 (148)
Q Consensus 90 ----~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~ 127 (148)
++ +.+..+.|||....|++++-|. +|++|+-.
T Consensus 142 c~aVL~~HtqDVK~V~WHPt~dlL~S~SYDn------TIk~~~~~ 180 (312)
T KOG0645|consen 142 CIAVLQEHTQDVKHVIWHPTEDLLFSCSYDN------TIKVYRDE 180 (312)
T ss_pred EEeeeccccccccEEEEcCCcceeEEeccCC------eEEEEeec
Confidence 33 7788999999999999999988 99999866
No 43
>KOG0640|consensus
Probab=99.66 E-value=2.2e-15 Score=104.44 Aligned_cols=120 Identities=14% Similarity=0.174 Sum_probs=101.7
Q ss_pred ceeeecCcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEe---cCCCCCEEEEEEccCCCEEEEEeCCCcEEE
Q psy7062 7 GILTAFGQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINC---EGVSKNVVEVGFQEDGKWMFTGGEDCRARI 83 (148)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~---~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l 83 (148)
-+...+...++.|+|. |++|++|.+..++++||+++. +..... ..|+..|+++.+++.|++.++++.||.|++
T Consensus 212 ~~qd~~~vrsiSfHPs--GefllvgTdHp~~rlYdv~T~--QcfvsanPd~qht~ai~~V~Ys~t~~lYvTaSkDG~Ikl 287 (430)
T KOG0640|consen 212 VFQDTEPVRSISFHPS--GEFLLVGTDHPTLRLYDVNTY--QCFVSANPDDQHTGAITQVRYSSTGSLYVTASKDGAIKL 287 (430)
T ss_pred HhhccceeeeEeecCC--CceEEEecCCCceeEEeccce--eEeeecCcccccccceeEEEecCCccEEEEeccCCcEEe
Confidence 3344555678888888 999999888889999999987 544322 358999999999999999999999999999
Q ss_pred EECCcc-----cc-----ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceeccC
Q psy7062 84 WDLSLC-----FI-----QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVASN 136 (148)
Q Consensus 84 ~d~~~~-----~~-----~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~~ 136 (148)
||--+. +. ..|++..|+.+++++++.+.|. .+++|.+.+...+..+.
T Consensus 288 wDGVS~rCv~t~~~AH~gsevcSa~Ftkn~kyiLsSG~DS------~vkLWEi~t~R~l~~Yt 344 (430)
T KOG0640|consen 288 WDGVSNRCVRTIGNAHGGSEVCSAVFTKNGKYILSSGKDS------TVKLWEISTGRMLKEYT 344 (430)
T ss_pred eccccHHHHHHHHhhcCCceeeeEEEccCCeEEeecCCcc------eeeeeeecCCceEEEEe
Confidence 998776 33 7799999999999999999988 99999999988777664
No 44
>KOG0285|consensus
Probab=99.66 E-value=1.2e-15 Score=107.18 Aligned_cols=108 Identities=15% Similarity=0.264 Sum_probs=97.1
Q ss_pred EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----
Q psy7062 15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC----- 89 (148)
Q Consensus 15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~----- 89 (148)
..++++.. ..++.++++|+.|+.||++.. +.++.+.+|-+.|.+++..|.-..+++++.|.++++||+++.
T Consensus 197 r~vavS~r--HpYlFs~gedk~VKCwDLe~n--kvIR~YhGHlS~V~~L~lhPTldvl~t~grDst~RvWDiRtr~~V~~ 272 (460)
T KOG0285|consen 197 RGVAVSKR--HPYLFSAGEDKQVKCWDLEYN--KVIRHYHGHLSGVYCLDLHPTLDVLVTGGRDSTIRVWDIRTRASVHV 272 (460)
T ss_pred eeeeeccc--CceEEEecCCCeeEEEechhh--hhHHHhccccceeEEEeccccceeEEecCCcceEEEeeecccceEEE
Confidence 56777777 679999999999999999998 899999999999999999999999999999999999999988
Q ss_pred cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcce
Q psy7062 90 FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAV 132 (148)
Q Consensus 90 ~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~ 132 (148)
+. ..+..+.+.|-..++++++.|+ +|++||++..+..
T Consensus 273 l~GH~~~V~~V~~~~~dpqvit~S~D~------tvrlWDl~agkt~ 312 (460)
T KOG0285|consen 273 LSGHTNPVASVMCQPTDPQVITGSHDS------TVRLWDLRAGKTM 312 (460)
T ss_pred ecCCCCcceeEEeecCCCceEEecCCc------eEEEeeeccCcee
Confidence 33 7899999999777899999988 9999999876543
No 45
>KOG0295|consensus
Probab=99.65 E-value=3e-15 Score=105.16 Aligned_cols=94 Identities=18% Similarity=0.310 Sum_probs=87.0
Q ss_pred ccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----cc---ccceE
Q psy7062 25 VEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-----FI---QQVNA 96 (148)
Q Consensus 25 ~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-----~~---~~i~~ 96 (148)
++++++++.|++|++||+.++ ..+.++.+|..+|.+++|+|.|++++++..|+++++||+++. +. .-+.+
T Consensus 304 ~~~l~s~SrDktIk~wdv~tg--~cL~tL~ghdnwVr~~af~p~Gkyi~ScaDDktlrvwdl~~~~cmk~~~ah~hfvt~ 381 (406)
T KOG0295|consen 304 GQVLGSGSRDKTIKIWDVSTG--MCLFTLVGHDNWVRGVAFSPGGKYILSCADDKTLRVWDLKNLQCMKTLEAHEHFVTS 381 (406)
T ss_pred ccEEEeecccceEEEEeccCC--eEEEEEecccceeeeeEEcCCCeEEEEEecCCcEEEEEeccceeeeccCCCcceeEE
Confidence 479999999999999999999 999999999999999999999999999999999999999988 22 77889
Q ss_pred EEEccCCCEEEEEecCCceecCeeEEEeec
Q psy7062 97 LRITPDKQLLASAEELSCCYCGAAVFVYNS 126 (148)
Q Consensus 97 ~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~ 126 (148)
+.|+.+..++++|+-|. ++++|..
T Consensus 382 lDfh~~~p~VvTGsVdq------t~KvwEc 405 (406)
T KOG0295|consen 382 LDFHKTAPYVVTGSVDQ------TVKVWEC 405 (406)
T ss_pred EecCCCCceEEeccccc------eeeeeec
Confidence 99999999999999977 8999865
No 46
>KOG0273|consensus
Probab=99.65 E-value=4e-15 Score=107.47 Aligned_cols=113 Identities=19% Similarity=0.326 Sum_probs=97.4
Q ss_pred CcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc---
Q psy7062 13 GQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC--- 89 (148)
Q Consensus 13 ~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~--- 89 (148)
+..+++|+.+ |.+||+|+.+|.+++|+.... .+.++..|...|.+++|+.+|.++++++.|+++.+||..++
T Consensus 237 dVT~L~Wn~~--G~~LatG~~~G~~riw~~~G~---l~~tl~~HkgPI~slKWnk~G~yilS~~vD~ttilwd~~~g~~~ 311 (524)
T KOG0273|consen 237 DVTSLDWNND--GTLLATGSEDGEARIWNKDGN---LISTLGQHKGPIFSLKWNKKGTYILSGGVDGTTILWDAHTGTVK 311 (524)
T ss_pred CcceEEecCC--CCeEEEeecCcEEEEEecCch---hhhhhhccCCceEEEEEcCCCCEEEeccCCccEEEEeccCceEE
Confidence 3466777666 999999999999999999864 78888889999999999999999999999999999999665
Q ss_pred -------------------------------------------cc---ccceEEEEccCCCEEEEEecCCceecCeeEEE
Q psy7062 90 -------------------------------------------FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFV 123 (148)
Q Consensus 90 -------------------------------------------~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~ 123 (148)
|. +.|.++.|.|.+.+|++++.|+ ++++
T Consensus 312 q~f~~~s~~~lDVdW~~~~~F~ts~td~~i~V~kv~~~~P~~t~~GH~g~V~alk~n~tg~LLaS~SdD~------Tlki 385 (524)
T KOG0273|consen 312 QQFEFHSAPALDVDWQSNDEFATSSTDGCIHVCKVGEDRPVKTFIGHHGEVNALKWNPTGSLLASCSDDG------TLKI 385 (524)
T ss_pred EeeeeccCCccceEEecCceEeecCCCceEEEEEecCCCcceeeecccCceEEEEECCCCceEEEecCCC------eeEe
Confidence 11 7899999999999999999999 9999
Q ss_pred eecCCCcceeccC
Q psy7062 124 YNSCYPAAVVASN 136 (148)
Q Consensus 124 ~d~~~~~~~~~~~ 136 (148)
|+.........+.
T Consensus 386 Ws~~~~~~~~~l~ 398 (524)
T KOG0273|consen 386 WSMGQSNSVHDLQ 398 (524)
T ss_pred eecCCCcchhhhh
Confidence 9976555544443
No 47
>KOG0318|consensus
Probab=99.65 E-value=7.3e-15 Score=107.43 Aligned_cols=118 Identities=15% Similarity=0.289 Sum_probs=99.7
Q ss_pred cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----
Q psy7062 14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC---- 89 (148)
Q Consensus 14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~---- 89 (148)
..++|.+|+ +..+++|+.|+.+++|.+.............|...|+.+++|||+.+|++++-.+.+.+||..+.
T Consensus 446 ~s~vAv~~~--~~~vaVGG~Dgkvhvysl~g~~l~ee~~~~~h~a~iT~vaySpd~~yla~~Da~rkvv~yd~~s~~~~~ 523 (603)
T KOG0318|consen 446 SSAVAVSPD--GSEVAVGGQDGKVHVYSLSGDELKEEAKLLEHRAAITDVAYSPDGAYLAAGDASRKVVLYDVASREVKT 523 (603)
T ss_pred cceEEEcCC--CCEEEEecccceEEEEEecCCcccceeeeecccCCceEEEECCCCcEEEEeccCCcEEEEEcccCceec
Confidence 467888888 89999999999999999987522334455679999999999999999999999999999999887
Q ss_pred ----cc-ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceeccCccc
Q psy7062 90 ----FI-QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVASNTLV 139 (148)
Q Consensus 90 ----~~-~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~~~~~ 139 (148)
|. .+|.+++|+|+...+++|+-|- .|.+|++..|.........+
T Consensus 524 ~~w~FHtakI~~~aWsP~n~~vATGSlDt------~Viiysv~kP~~~i~iknAH 572 (603)
T KOG0318|consen 524 NRWAFHTAKINCVAWSPNNKLVATGSLDT------NVIIYSVKKPAKHIIIKNAH 572 (603)
T ss_pred ceeeeeeeeEEEEEeCCCceEEEeccccc------eEEEEEccChhhheEecccc
Confidence 33 9999999999999999999877 89999999876544443333
No 48
>KOG1273|consensus
Probab=99.65 E-value=3.2e-15 Score=103.69 Aligned_cols=98 Identities=18% Similarity=0.226 Sum_probs=85.1
Q ss_pred cccceeeecCcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEE
Q psy7062 4 ALGGILTAFGQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARI 83 (148)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l 83 (148)
+|.+-+......++.|++- |.+||+|+.+|.+.+||+.+. ..-+.+.+|...|++++||++|+.|++++.|..+.+
T Consensus 16 el~~tld~~~a~~~~Fs~~--G~~lAvGc~nG~vvI~D~~T~--~iar~lsaH~~pi~sl~WS~dgr~LltsS~D~si~l 91 (405)
T KOG1273|consen 16 ELTHTLDNPLAECCQFSRW--GDYLAVGCANGRVVIYDFDTF--RIARMLSAHVRPITSLCWSRDGRKLLTSSRDWSIKL 91 (405)
T ss_pred hhceeccCCccceEEeccC--cceeeeeccCCcEEEEEcccc--chhhhhhccccceeEEEecCCCCEeeeecCCceeEE
Confidence 4455555555678888877 999999999999999999998 777889999999999999999999999999999999
Q ss_pred EECCcc-------ccccceEEEEccCCCE
Q psy7062 84 WDLSLC-------FIQQVNALRITPDKQL 105 (148)
Q Consensus 84 ~d~~~~-------~~~~i~~~~~sp~~~~ 105 (148)
||+..+ |.++++...|+|..+.
T Consensus 92 wDl~~gs~l~rirf~spv~~~q~hp~k~n 120 (405)
T KOG1273|consen 92 WDLLKGSPLKRIRFDSPVWGAQWHPRKRN 120 (405)
T ss_pred EeccCCCceeEEEccCccceeeeccccCC
Confidence 999988 3399999999995543
No 49
>KOG0318|consensus
Probab=99.64 E-value=1.6e-14 Score=105.72 Aligned_cols=109 Identities=18% Similarity=0.246 Sum_probs=97.8
Q ss_pred EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEec---CCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc--
Q psy7062 15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCE---GVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-- 89 (148)
Q Consensus 15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~---~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-- 89 (148)
.++.|+|+ |.++++++.|+++.+||=+++ +.+..+. +|.+.|.+++|+||+..+++++-|.++++||+.+.
T Consensus 194 ~~VRysPD--G~~Fat~gsDgki~iyDGktg--e~vg~l~~~~aHkGsIfalsWsPDs~~~~T~SaDkt~KIWdVs~~sl 269 (603)
T KOG0318|consen 194 NCVRYSPD--GSRFATAGSDGKIYIYDGKTG--EKVGELEDSDAHKGSIFALSWSPDSTQFLTVSADKTIKIWDVSTNSL 269 (603)
T ss_pred eeEEECCC--CCeEEEecCCccEEEEcCCCc--cEEEEecCCCCccccEEEEEECCCCceEEEecCCceEEEEEeeccce
Confidence 67888898 999999999999999999999 8888887 79999999999999999999999999999999765
Q ss_pred -----------------------------------cc--------------ccceEEEEccCCCEEEEEecCCceecCee
Q psy7062 90 -----------------------------------FI--------------QQVNALRITPDKQLLASAEELSCCYCGAA 120 (148)
Q Consensus 90 -----------------------------------~~--------------~~i~~~~~sp~~~~l~~~~~d~~~~~~~~ 120 (148)
|. ..|.++..+|++.+|++++.|| .
T Consensus 270 v~t~~~~~~v~dqqvG~lWqkd~lItVSl~G~in~ln~~d~~~~~~i~GHnK~ITaLtv~~d~~~i~SgsyDG------~ 343 (603)
T KOG0318|consen 270 VSTWPMGSTVEDQQVGCLWQKDHLITVSLSGTINYLNPSDPSVLKVISGHNKSITALTVSPDGKTIYSGSYDG------H 343 (603)
T ss_pred EEEeecCCchhceEEEEEEeCCeEEEEEcCcEEEEecccCCChhheecccccceeEEEEcCCCCEEEeeccCc------e
Confidence 00 6789999999999999999999 9
Q ss_pred EEEeecCCCccee
Q psy7062 121 VFVYNSCYPAAVV 133 (148)
Q Consensus 121 i~~~d~~~~~~~~ 133 (148)
|.-||......-.
T Consensus 344 I~~W~~~~g~~~~ 356 (603)
T KOG0318|consen 344 INSWDSGSGTSDR 356 (603)
T ss_pred EEEEecCCccccc
Confidence 9999988665443
No 50
>KOG0283|consensus
Probab=99.64 E-value=1.2e-15 Score=115.97 Aligned_cols=106 Identities=15% Similarity=0.317 Sum_probs=89.1
Q ss_pred EEEEeCCCCccEEEEEecCCeEEEEeCCC--------------------------------CC-----------------
Q psy7062 16 STVFDSKHLVEMVAALGGYQHIRMYDFGS--------------------------------NN----------------- 46 (148)
Q Consensus 16 ~~~~~~~~~~~~l~~~~~d~~v~~~d~~~--------------------------------~~----------------- 46 (148)
+..|+++ |.|||+|+.|+.|+||.+.. ..
T Consensus 272 ~mKFS~D--GKyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s~~~~~~~s~~~~ 349 (712)
T KOG0283|consen 272 AMKFSHD--GKYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTSSSRKGSQSPCVL 349 (712)
T ss_pred EEEeCCC--CceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCccccccccccccccccccccCCcccc
Confidence 4555666 99999999999999998866 00
Q ss_pred ---------CCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----cc--ccceEEEEcc-CCCEEEEE
Q psy7062 47 ---------PNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-----FI--QQVNALRITP-DKQLLASA 109 (148)
Q Consensus 47 ---------~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-----~~--~~i~~~~~sp-~~~~l~~~ 109 (148)
.+++..+.+|...|..++||.+ .+|++++.|.+++||++... |. ..++|++|+| |.+++++|
T Consensus 350 ~p~~~f~f~ekP~~ef~GHt~DILDlSWSKn-~fLLSSSMDKTVRLWh~~~~~CL~~F~HndfVTcVaFnPvDDryFiSG 428 (712)
T KOG0283|consen 350 LPLKAFVFSEKPFCEFKGHTADILDLSWSKN-NFLLSSSMDKTVRLWHPGRKECLKVFSHNDFVTCVAFNPVDDRYFISG 428 (712)
T ss_pred CCCccccccccchhhhhccchhheecccccC-CeeEeccccccEEeecCCCcceeeEEecCCeeEEEEecccCCCcEeec
Confidence 1345567889999999999874 56889999999999999876 54 8899999999 89999999
Q ss_pred ecCCceecCeeEEEeecCCCc
Q psy7062 110 EELSCCYCGAAVFVYNSCYPA 130 (148)
Q Consensus 110 ~~d~~~~~~~~i~~~d~~~~~ 130 (148)
+-|+ ++++|++..-+
T Consensus 429 SLD~------KvRiWsI~d~~ 443 (712)
T KOG0283|consen 429 SLDG------KVRLWSISDKK 443 (712)
T ss_pred cccc------ceEEeecCcCe
Confidence 9999 99999987544
No 51
>KOG0289|consensus
Probab=99.63 E-value=1.1e-14 Score=104.35 Aligned_cols=111 Identities=19% Similarity=0.197 Sum_probs=93.2
Q ss_pred EEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecC--CCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----
Q psy7062 16 STVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEG--VSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC---- 89 (148)
Q Consensus 16 ~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~--~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~---- 89 (148)
....+....|+||+++++|++.-..|++++ ..+..... ..-.+++..|+|||..+.+|..|+.+++||+.++
T Consensus 306 V~~ls~h~tgeYllsAs~d~~w~Fsd~~~g--~~lt~vs~~~s~v~~ts~~fHpDgLifgtgt~d~~vkiwdlks~~~~a 383 (506)
T KOG0289|consen 306 VTGLSLHPTGEYLLSASNDGTWAFSDISSG--SQLTVVSDETSDVEYTSAAFHPDGLIFGTGTPDGVVKIWDLKSQTNVA 383 (506)
T ss_pred ceeeeeccCCcEEEEecCCceEEEEEccCC--cEEEEEeeccccceeEEeeEcCCceEEeccCCCceEEEEEcCCccccc
Confidence 333343444999999999999999999998 66665543 2245899999999999999999999999999988
Q ss_pred -cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceec
Q psy7062 90 -FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVA 134 (148)
Q Consensus 90 -~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~ 134 (148)
|. ++|..++|+.+|-+|++++.|+ .|++||+|.......
T Consensus 384 ~Fpght~~vk~i~FsENGY~Lat~add~------~V~lwDLRKl~n~kt 426 (506)
T KOG0289|consen 384 KFPGHTGPVKAISFSENGYWLATAADDG------SVKLWDLRKLKNFKT 426 (506)
T ss_pred cCCCCCCceeEEEeccCceEEEEEecCC------eEEEEEehhhcccce
Confidence 55 9999999999999999999988 899999997765443
No 52
>KOG0296|consensus
Probab=99.63 E-value=1.7e-14 Score=101.40 Aligned_cols=109 Identities=17% Similarity=0.226 Sum_probs=95.4
Q ss_pred EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----
Q psy7062 15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC----- 89 (148)
Q Consensus 15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~----- 89 (148)
..++.+.+++.+++++|+.|..-.+|++.++ +....+.+|+..|+++.|+.+|.++++|+.+|.+++|+..++
T Consensus 66 svFavsl~P~~~l~aTGGgDD~AflW~~~~g--e~~~eltgHKDSVt~~~FshdgtlLATGdmsG~v~v~~~stg~~~~~ 143 (399)
T KOG0296|consen 66 SVFAVSLHPNNNLVATGGGDDLAFLWDISTG--EFAGELTGHKDSVTCCSFSHDGTLLATGDMSGKVLVFKVSTGGEQWK 143 (399)
T ss_pred ceEEEEeCCCCceEEecCCCceEEEEEccCC--cceeEecCCCCceEEEEEccCceEEEecCCCccEEEEEcccCceEEE
Confidence 3333333335899999999999999999999 888999999999999999999999999999999999999888
Q ss_pred c--c-ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcc
Q psy7062 90 F--I-QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAA 131 (148)
Q Consensus 90 ~--~-~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~ 131 (148)
+ . ..+-.+.|||.++.|+.|+.|| .+..|.+.+...
T Consensus 144 ~~~e~~dieWl~WHp~a~illAG~~DG------svWmw~ip~~~~ 182 (399)
T KOG0296|consen 144 LDQEVEDIEWLKWHPRAHILLAGSTDG------SVWMWQIPSQAL 182 (399)
T ss_pred eecccCceEEEEecccccEEEeecCCC------cEEEEECCCcce
Confidence 2 2 7788899999999999999999 899999987433
No 53
>KOG0289|consensus
Probab=99.63 E-value=8.1e-15 Score=105.09 Aligned_cols=102 Identities=23% Similarity=0.399 Sum_probs=90.4
Q ss_pred cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc--cc
Q psy7062 14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC--FI 91 (148)
Q Consensus 14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~--~~ 91 (148)
..+.+|+|+ |.+|.+|..|+.+++||++++ ..+..|.+|++.|..++|+-+|-|+++++.|+.+++||++.. |+
T Consensus 350 ~ts~~fHpD--gLifgtgt~d~~vkiwdlks~--~~~a~Fpght~~vk~i~FsENGY~Lat~add~~V~lwDLRKl~n~k 425 (506)
T KOG0289|consen 350 YTSAAFHPD--GLIFGTGTPDGVVKIWDLKSQ--TNVAKFPGHTGPVKAISFSENGYWLATAADDGSVKLWDLRKLKNFK 425 (506)
T ss_pred eEEeeEcCC--ceEEeccCCCceEEEEEcCCc--cccccCCCCCCceeEEEeccCceEEEEEecCCeEEEEEehhhcccc
Confidence 467888998 999999999999999999998 788999999999999999999999999999999999999987 22
Q ss_pred -------ccceEEEEccCCCEEEEEecCCceecCeeEEEee
Q psy7062 92 -------QQVNALRITPDKQLLASAEELSCCYCGAAVFVYN 125 (148)
Q Consensus 92 -------~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d 125 (148)
..+..+.|.+.|++|+.++.+- +|++++
T Consensus 426 t~~l~~~~~v~s~~fD~SGt~L~~~g~~l------~Vy~~~ 460 (506)
T KOG0289|consen 426 TIQLDEKKEVNSLSFDQSGTYLGIAGSDL------QVYICK 460 (506)
T ss_pred eeeccccccceeEEEcCCCCeEEeeccee------EEEEEe
Confidence 5699999999999999997733 555555
No 54
>KOG0276|consensus
Probab=99.63 E-value=6.6e-15 Score=109.68 Aligned_cols=108 Identities=21% Similarity=0.394 Sum_probs=95.5
Q ss_pred EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCC--CEEEEEeCCCcEEEEECCcc---
Q psy7062 15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDG--KWMFTGGEDCRARIWDLSLC--- 89 (148)
Q Consensus 15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~--~~l~~~~~~~~i~l~d~~~~--- 89 (148)
..++|.|.. .+.+|++|-|++|++|.+.++ .+..++++|...|.++++-+.| -++++|+.|.++++||.++.
T Consensus 144 Mqv~fnPkD-~ntFaS~sLDrTVKVWslgs~--~~nfTl~gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk~CV 220 (794)
T KOG0276|consen 144 MQVAFNPKD-PNTFASASLDRTVKVWSLGSP--HPNFTLEGHEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQTKSCV 220 (794)
T ss_pred EEEEecCCC-ccceeeeeccccEEEEEcCCC--CCceeeeccccCcceEEeccCCCcceEEecCCCceEEEeecchHHHH
Confidence 466777864 788899999999999999988 8889999999999999998754 49999999999999999987
Q ss_pred --cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcc
Q psy7062 90 --FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAA 131 (148)
Q Consensus 90 --~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~ 131 (148)
+. +.+..+.|+|.-..+++|++|| ++++|+..+.+.
T Consensus 221 ~TLeGHt~Nvs~v~fhp~lpiiisgsEDG------TvriWhs~Ty~l 261 (794)
T KOG0276|consen 221 QTLEGHTNNVSFVFFHPELPIIISGSEDG------TVRIWNSKTYKL 261 (794)
T ss_pred HHhhcccccceEEEecCCCcEEEEecCCc------cEEEecCcceeh
Confidence 44 8899999999999999999999 999999776544
No 55
>KOG1446|consensus
Probab=99.62 E-value=2.4e-14 Score=98.85 Aligned_cols=108 Identities=17% Similarity=0.184 Sum_probs=89.4
Q ss_pred cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCC------------------------------------------CCceE
Q psy7062 14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNN------------------------------------------PNPVI 51 (148)
Q Consensus 14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~------------------------------------------~~~~~ 51 (148)
..++.|+.+ |++|+++++|.++++||..+++ .+.++
T Consensus 17 i~sl~fs~~--G~~litss~dDsl~LYd~~~g~~~~ti~skkyG~~~~~Fth~~~~~i~sStk~d~tIryLsl~dNkylR 94 (311)
T KOG1446|consen 17 INSLDFSDD--GLLLITSSEDDSLRLYDSLSGKQVKTINSKKYGVDLACFTHHSNTVIHSSTKEDDTIRYLSLHDNKYLR 94 (311)
T ss_pred eeEEEecCC--CCEEEEecCCCeEEEEEcCCCceeeEeecccccccEEEEecCCceEEEccCCCCCceEEEEeecCceEE
Confidence 456666666 8888887888888888887654 24567
Q ss_pred EecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----cc-ccceEEEEccCCCEEEEEecCCceecCeeEEEee
Q psy7062 52 NCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-----FI-QQVNALRITPDKQLLASAEELSCCYCGAAVFVYN 125 (148)
Q Consensus 52 ~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-----~~-~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d 125 (148)
.|.+|...|.+++.+|-+..+++++.|.++++||++.. +. ......+|.|+|-+++.+...+ .|++||
T Consensus 95 YF~GH~~~V~sL~~sP~~d~FlS~S~D~tvrLWDlR~~~cqg~l~~~~~pi~AfDp~GLifA~~~~~~------~IkLyD 168 (311)
T KOG1446|consen 95 YFPGHKKRVNSLSVSPKDDTFLSSSLDKTVRLWDLRVKKCQGLLNLSGRPIAAFDPEGLIFALANGSE------LIKLYD 168 (311)
T ss_pred EcCCCCceEEEEEecCCCCeEEecccCCeEEeeEecCCCCceEEecCCCcceeECCCCcEEEEecCCC------eEEEEE
Confidence 78999999999999999999999999999999999966 33 5566789999999999998754 899999
Q ss_pred cCCC
Q psy7062 126 SCYP 129 (148)
Q Consensus 126 ~~~~ 129 (148)
++.-
T Consensus 169 ~Rs~ 172 (311)
T KOG1446|consen 169 LRSF 172 (311)
T ss_pred eccc
Confidence 9864
No 56
>PTZ00420 coronin; Provisional
Probab=99.62 E-value=3.9e-14 Score=107.61 Aligned_cols=111 Identities=8% Similarity=0.048 Sum_probs=85.6
Q ss_pred cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----
Q psy7062 14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC---- 89 (148)
Q Consensus 14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~---- 89 (148)
..+++|+|.. ..+|++++.|++|++||++++ +.+..+. |...|.+++|+|+|..+++++.|+.+++||++++
T Consensus 128 V~sVaf~P~g-~~iLaSgS~DgtIrIWDl~tg--~~~~~i~-~~~~V~SlswspdG~lLat~s~D~~IrIwD~Rsg~~i~ 203 (568)
T PTZ00420 128 ISIIDWNPMN-YYIMCSSGFDSFVNIWDIENE--KRAFQIN-MPKKLSSLKWNIKGNLLSGTCVGKHMHIIDPRKQEIAS 203 (568)
T ss_pred EEEEEECCCC-CeEEEEEeCCCeEEEEECCCC--cEEEEEe-cCCcEEEEEECCCCCEEEEEecCCEEEEEECCCCcEEE
Confidence 4678888872 345678899999999999987 6666665 6678999999999999999999999999999987
Q ss_pred -cc---cc-----ceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062 90 -FI---QQ-----VNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA 130 (148)
Q Consensus 90 -~~---~~-----i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~ 130 (148)
+. +. ++...|++++.+|++++.++. ...+|++||++...
T Consensus 204 tl~gH~g~~~s~~v~~~~fs~d~~~IlTtG~d~~--~~R~VkLWDlr~~~ 251 (568)
T PTZ00420 204 SFHIHDGGKNTKNIWIDGLGGDDNYILSTGFSKN--NMREMKLWDLKNTT 251 (568)
T ss_pred EEecccCCceeEEEEeeeEcCCCCEEEEEEcCCC--CccEEEEEECCCCC
Confidence 22 22 223345688899999887641 12379999999643
No 57
>KOG0772|consensus
Probab=99.61 E-value=3.2e-15 Score=109.17 Aligned_cols=118 Identities=19% Similarity=0.338 Sum_probs=93.6
Q ss_pred cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEE-ecCCCC--CEEEEEEccCCCEEEEEeCCCcEEEEECCcc-
Q psy7062 14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVIN-CEGVSK--NVVEVGFQEDGKWMFTGGEDCRARIWDLSLC- 89 (148)
Q Consensus 14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~-~~~~~~--~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~- 89 (148)
...++|+++ +.++|+|+.||+|.+|+......++... -.+|.. .|+++.||+||++|++.+.|+++++||++..
T Consensus 320 ~tsC~~nrd--g~~iAagc~DGSIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~D~tLKvWDLrq~k 397 (641)
T KOG0772|consen 320 VTSCAWNRD--GKLIAAGCLDGSIQIWDKGSRTVRPVMKVKDAHLPGQDITSISFSYDGNYLLSRGFDDTLKVWDLRQFK 397 (641)
T ss_pred ceeeecCCC--cchhhhcccCCceeeeecCCcccccceEeeeccCCCCceeEEEeccccchhhhccCCCceeeeeccccc
Confidence 467888888 8999999999999999986543333333 346766 8999999999999999999999999999877
Q ss_pred --------cc--ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCccee
Q psy7062 90 --------FI--QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVV 133 (148)
Q Consensus 90 --------~~--~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~ 133 (148)
+. -+-...+|||+.++|++|..-..-...+.+.+||-.+...+.
T Consensus 398 kpL~~~tgL~t~~~~tdc~FSPd~kli~TGtS~~~~~~~g~L~f~d~~t~d~v~ 451 (641)
T KOG0772|consen 398 KPLNVRTGLPTPFPGTDCCFSPDDKLILTGTSAPNGMTAGTLFFFDRMTLDTVY 451 (641)
T ss_pred cchhhhcCCCccCCCCccccCCCceEEEecccccCCCCCceEEEEeccceeeEE
Confidence 21 556788999999999999764444445578999977655443
No 58
>KOG0281|consensus
Probab=99.61 E-value=3.3e-15 Score=104.92 Aligned_cols=95 Identities=15% Similarity=0.278 Sum_probs=85.0
Q ss_pred ccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----cc---ccceE
Q psy7062 25 VEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-----FI---QQVNA 96 (148)
Q Consensus 25 ~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-----~~---~~i~~ 96 (148)
.+++++++.|.++++|++.+. +.++++.+|...|-++. ..++++++|+.|.+|++||+..+ ++ .-+.+
T Consensus 330 ~kyIVsASgDRTikvW~~st~--efvRtl~gHkRGIAClQ--Yr~rlvVSGSSDntIRlwdi~~G~cLRvLeGHEeLvRc 405 (499)
T KOG0281|consen 330 DKYIVSASGDRTIKVWSTSTC--EFVRTLNGHKRGIACLQ--YRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRC 405 (499)
T ss_pred cceEEEecCCceEEEEeccce--eeehhhhcccccceehh--ccCeEEEecCCCceEEEEeccccHHHHHHhchHHhhhh
Confidence 569999999999999999999 99999999999997764 48999999999999999999998 34 66899
Q ss_pred EEEccCCCEEEEEecCCceecCeeEEEeecCCCcc
Q psy7062 97 LRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAA 131 (148)
Q Consensus 97 ~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~ 131 (148)
+.| +.+.+++|.-|| +|++||+.....
T Consensus 406 iRF--d~krIVSGaYDG------kikvWdl~aald 432 (499)
T KOG0281|consen 406 IRF--DNKRIVSGAYDG------KIKVWDLQAALD 432 (499)
T ss_pred eee--cCceeeeccccc------eEEEEecccccC
Confidence 999 888999999999 999999876543
No 59
>KOG0292|consensus
Probab=99.61 E-value=7.5e-15 Score=113.02 Aligned_cols=107 Identities=18% Similarity=0.288 Sum_probs=98.7
Q ss_pred cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----
Q psy7062 14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC---- 89 (148)
Q Consensus 14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~---- 89 (148)
...++|+|. ..++++|++|-.|++|+.++. +++.++.+|-.-|..+.|++.--|++++|.|.+|++|++.++
T Consensus 54 VRgv~FH~~--qplFVSGGDDykIkVWnYk~r--rclftL~GHlDYVRt~~FHheyPWIlSASDDQTIrIWNwqsr~~ia 129 (1202)
T KOG0292|consen 54 VRGVDFHPT--QPLFVSGGDDYKIKVWNYKTR--RCLFTLLGHLDYVRTVFFHHEYPWILSASDDQTIRIWNWQSRKCIA 129 (1202)
T ss_pred cceeeecCC--CCeEEecCCccEEEEEecccc--eehhhhccccceeEEeeccCCCceEEEccCCCeEEEEeccCCceEE
Confidence 367888888 899999999999999999998 999999999999999999999999999999999999999998
Q ss_pred -cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062 90 -FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA 130 (148)
Q Consensus 90 -~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~ 130 (148)
+. +.+.|.+|+|....++++|-|. +|++||+...+
T Consensus 130 vltGHnHYVMcAqFhptEDlIVSaSLDQ------TVRVWDisGLR 168 (1202)
T KOG0292|consen 130 VLTGHNHYVMCAQFHPTEDLIVSASLDQ------TVRVWDISGLR 168 (1202)
T ss_pred EEecCceEEEeeccCCccceEEEecccc------eEEEEeecchh
Confidence 44 8899999999999999999988 99999987544
No 60
>KOG0319|consensus
Probab=99.60 E-value=2.5e-14 Score=107.96 Aligned_cols=105 Identities=15% Similarity=0.354 Sum_probs=95.7
Q ss_pred cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----
Q psy7062 14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC---- 89 (148)
Q Consensus 14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~---- 89 (148)
.-++.|++. .++++++|.|.+|++|.+.+. .++.++.+|++.|....|-.+|+.+++++.||.+++|++++.
T Consensus 508 vw~V~Fs~~--dq~laT~SgD~TvKIW~is~f--SClkT~eGH~~aVlra~F~~~~~qliS~~adGliKlWnikt~eC~~ 583 (775)
T KOG0319|consen 508 VWCVSFSKN--DQLLATCSGDKTVKIWSISTF--SCLKTFEGHTSAVLRASFIRNGKQLISAGADGLIKLWNIKTNECEM 583 (775)
T ss_pred eEEEEeccc--cceeEeccCCceEEEEEeccc--eeeeeecCccceeEeeeeeeCCcEEEeccCCCcEEEEeccchhhhh
Confidence 356777776 789999999999999999999 999999999999999999999999999999999999999988
Q ss_pred -cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCC
Q psy7062 90 -FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCY 128 (148)
Q Consensus 90 -~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~ 128 (148)
+. .++|+++.+|....+++|+.|+ .|.+|.-.+
T Consensus 584 tlD~H~DrvWaL~~~~~~~~~~tgg~Dg------~i~~wkD~T 620 (775)
T KOG0319|consen 584 TLDAHNDRVWALSVSPLLDMFVTGGGDG------RIIFWKDVT 620 (775)
T ss_pred hhhhccceeEEEeecCccceeEecCCCe------EEEEeecCc
Confidence 33 8999999999999999999988 999996443
No 61
>KOG0310|consensus
Probab=99.60 E-value=4.1e-14 Score=102.48 Aligned_cols=106 Identities=19% Similarity=0.242 Sum_probs=90.1
Q ss_pred EEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEcc-CCCEEEEEeCCCcEEEEECCcc-----
Q psy7062 16 STVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQE-DGKWMFTGGEDCRARIWDLSLC----- 89 (148)
Q Consensus 16 ~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp-~~~~l~~~~~~~~i~l~d~~~~----- 89 (148)
.+-|.+. .+.+|++|++|+.+++||+.+. ..+..+.+|+..|.+.+++| ++.++++|+.||+|++||+++.
T Consensus 115 ~~~f~~~-d~t~l~s~sDd~v~k~~d~s~a--~v~~~l~~htDYVR~g~~~~~~~hivvtGsYDg~vrl~DtR~~~~~v~ 191 (487)
T KOG0310|consen 115 VTKFSPQ-DNTMLVSGSDDKVVKYWDLSTA--YVQAELSGHTDYVRCGDISPANDHIVVTGSYDGKVRLWDTRSLTSRVV 191 (487)
T ss_pred EEEeccc-CCeEEEecCCCceEEEEEcCCc--EEEEEecCCcceeEeeccccCCCeEEEecCCCceEEEEEeccCCceeE
Confidence 4445554 4889999999999999999998 56778899999999999999 5668999999999999999986
Q ss_pred -cc--ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcc
Q psy7062 90 -FI--QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAA 131 (148)
Q Consensus 90 -~~--~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~ 131 (148)
+. .++-.+.+-|.|..+++++. +.|++||+.++..
T Consensus 192 elnhg~pVe~vl~lpsgs~iasAgG-------n~vkVWDl~~G~q 229 (487)
T KOG0310|consen 192 ELNHGCPVESVLALPSGSLIASAGG-------NSVKVWDLTTGGQ 229 (487)
T ss_pred EecCCCceeeEEEcCCCCEEEEcCC-------CeEEEEEecCCce
Confidence 33 88999999999999999874 3599999986544
No 62
>KOG0265|consensus
Probab=99.59 E-value=3.9e-14 Score=97.53 Aligned_cols=111 Identities=14% Similarity=0.183 Sum_probs=93.1
Q ss_pred CCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCC-EEEEEeCCCcEEEEECCcc-----cc--c
Q psy7062 21 SKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGK-WMFTGGEDCRARIWDLSLC-----FI--Q 92 (148)
Q Consensus 21 ~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~-~l~~~~~~~~i~l~d~~~~-----~~--~ 92 (148)
...++..+++++.|.+++.||++++ +.++.+++|...+..+.-+.-|. ++.+++.|+++++||+++. ++ .
T Consensus 98 ~~~d~s~i~S~gtDk~v~~wD~~tG--~~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t~~~ky 175 (338)
T KOG0265|consen 98 GMRDGSHILSCGTDKTVRGWDAETG--KRIRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAIKTFENKY 175 (338)
T ss_pred eccCCCEEEEecCCceEEEEecccc--eeeehhccccceeeecCccccCCeEEEecCCCceEEEEeecccchhhccccce
Confidence 3344889999999999999999999 89999999999999998666555 6678899999999999976 43 7
Q ss_pred cceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceeccCccc
Q psy7062 93 QVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVASNTLV 139 (148)
Q Consensus 93 ~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~~~~~ 139 (148)
++.++.|..++..+.+|+=|+ .|++||++........++..
T Consensus 176 qltAv~f~d~s~qv~sggIdn------~ikvWd~r~~d~~~~lsGh~ 216 (338)
T KOG0265|consen 176 QLTAVGFKDTSDQVISGGIDN------DIKVWDLRKNDGLYTLSGHA 216 (338)
T ss_pred eEEEEEecccccceeeccccC------ceeeeccccCcceEEeeccc
Confidence 789999999999999999877 89999998766555554443
No 63
>KOG0643|consensus
Probab=99.59 E-value=5.5e-14 Score=95.61 Aligned_cols=120 Identities=13% Similarity=0.210 Sum_probs=97.4
Q ss_pred eecCcEEEEE--eCCCCccEEEEEecCCeEEEEeCCCCC-----------------------------------------
Q psy7062 10 TAFGQISTVF--DSKHLVEMVAALGGYQHIRMYDFGSNN----------------------------------------- 46 (148)
Q Consensus 10 ~~~~~~~~~~--~~~~~~~~l~~~~~d~~v~~~d~~~~~----------------------------------------- 46 (148)
+..||....| |.+.....+++|+.|.++++||+++++
T Consensus 47 ty~GHtGavW~~Did~~s~~liTGSAD~t~kLWDv~tGk~la~~k~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fd 126 (327)
T KOG0643|consen 47 TYDGHTGAVWCCDIDWDSKHLITGSADQTAKLWDVETGKQLATWKTNSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFD 126 (327)
T ss_pred eecCCCceEEEEEecCCcceeeeccccceeEEEEcCCCcEEEEeecCCeeEEEeeccCCcEEEEEehhhcCcceEEEEEE
Confidence 4556666666 466669999999999999999999885
Q ss_pred ----------CCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc--cc-------ccceEEEEccCCCEEE
Q psy7062 47 ----------PNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC--FI-------QQVNALRITPDKQLLA 107 (148)
Q Consensus 47 ----------~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~--~~-------~~i~~~~~sp~~~~l~ 107 (148)
.++...+..+.+.++.+-|.|-++++++|..+|.|..||++++ +. ..|+.++++|+..+++
T Consensus 127 i~~~~~~~~s~ep~~kI~t~~skit~a~Wg~l~~~ii~Ghe~G~is~~da~~g~~~v~s~~~h~~~Ind~q~s~d~T~Fi 206 (327)
T KOG0643|consen 127 IRDDSSDIDSEEPYLKIPTPDSKITSALWGPLGETIIAGHEDGSISIYDARTGKELVDSDEEHSSKINDLQFSRDRTYFI 206 (327)
T ss_pred ccCChhhhcccCceEEecCCccceeeeeecccCCEEEEecCCCcEEEEEcccCceeeechhhhccccccccccCCcceEE
Confidence 1122333344567888999999999999999999999999997 11 7899999999999999
Q ss_pred EEecCCceecCeeEEEeecCCCcceecc
Q psy7062 108 SAEELSCCYCGAAVFVYNSCYPAAVVAS 135 (148)
Q Consensus 108 ~~~~d~~~~~~~~i~~~d~~~~~~~~~~ 135 (148)
+++.|. +-++||.++.+....+
T Consensus 207 T~s~Dt------takl~D~~tl~v~Kty 228 (327)
T KOG0643|consen 207 TGSKDT------TAKLVDVRTLEVLKTY 228 (327)
T ss_pred ecccCc------cceeeeccceeeEEEe
Confidence 999988 8999998877765544
No 64
>KOG0265|consensus
Probab=99.58 E-value=5.6e-14 Score=96.74 Aligned_cols=115 Identities=19% Similarity=0.211 Sum_probs=90.8
Q ss_pred cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----
Q psy7062 14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC---- 89 (148)
Q Consensus 14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~---- 89 (148)
.....|+|+ |.+|++|+.|..|.+|++-.- .+....+++|.+.|..+.|.+|++.+++++.|.+++.||.+++
T Consensus 50 I~~~~F~P~--gs~~aSgG~Dr~I~LWnv~gd-ceN~~~lkgHsgAVM~l~~~~d~s~i~S~gtDk~v~~wD~~tG~~~r 126 (338)
T KOG0265|consen 50 IYTIKFHPD--GSCFASGGSDRAIVLWNVYGD-CENFWVLKGHSGAVMELHGMRDGSHILSCGTDKTVRGWDAETGKRIR 126 (338)
T ss_pred EEEEEECCC--CCeEeecCCcceEEEEecccc-ccceeeeccccceeEeeeeccCCCEEEEecCCceEEEEecccceeee
Confidence 356677885 999999999999999997543 2567788899999999999999999999999999999999998
Q ss_pred -cc---ccceEEEEccCC-CEEEEEecCCceecCeeEEEeecCCCcceeccCc
Q psy7062 90 -FI---QQVNALRITPDK-QLLASAEELSCCYCGAAVFVYNSCYPAAVVASNT 137 (148)
Q Consensus 90 -~~---~~i~~~~~sp~~-~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~~~ 137 (148)
++ .-++.+.-+.-| +.+.+++.|+ ++++||.+...++...+.
T Consensus 127 k~k~h~~~vNs~~p~rrg~~lv~SgsdD~------t~kl~D~R~k~~~~t~~~ 173 (338)
T KOG0265|consen 127 KHKGHTSFVNSLDPSRRGPQLVCSGSDDG------TLKLWDIRKKEAIKTFEN 173 (338)
T ss_pred hhccccceeeecCccccCCeEEEecCCCc------eEEEEeecccchhhcccc
Confidence 33 334444433334 4566677777 999999997666655543
No 65
>KOG1407|consensus
Probab=99.58 E-value=2.8e-14 Score=96.69 Aligned_cols=66 Identities=29% Similarity=0.492 Sum_probs=59.9
Q ss_pred CceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----cc---ccceEEEEccCCCEEEEEecCC
Q psy7062 48 NPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-----FI---QQVNALRITPDKQLLASAEELS 113 (148)
Q Consensus 48 ~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-----~~---~~i~~~~~sp~~~~l~~~~~d~ 113 (148)
+++..+++|+....+|.|+|+|+++++|+-|..+.|||+... |. -+|+.+.|+.+|++|+++++|-
T Consensus 180 kpv~si~AH~snCicI~f~p~GryfA~GsADAlvSLWD~~ELiC~R~isRldwpVRTlSFS~dg~~lASaSEDh 253 (313)
T KOG1407|consen 180 KPVQSIKAHPSNCICIEFDPDGRYFATGSADALVSLWDVDELICERCISRLDWPVRTLSFSHDGRMLASASEDH 253 (313)
T ss_pred ccccccccCCcceEEEEECCCCceEeeccccceeeccChhHhhhheeeccccCceEEEEeccCcceeeccCccc
Confidence 566777889999999999999999999999999999999876 33 7899999999999999999988
No 66
>KOG0269|consensus
Probab=99.58 E-value=1.5e-14 Score=109.74 Aligned_cols=115 Identities=17% Similarity=0.299 Sum_probs=94.4
Q ss_pred CcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc---
Q psy7062 13 GQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC--- 89 (148)
Q Consensus 13 ~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~--- 89 (148)
....++|.|.. +..++++.+.|.+.+||++... +....+.+|.+.|.++.|+|++.+|++|++|+++++||..+.
T Consensus 178 SiRDV~fsp~~-~~~F~s~~dsG~lqlWDlRqp~-r~~~k~~AH~GpV~c~nwhPnr~~lATGGRDK~vkiWd~t~~~~~ 255 (839)
T KOG0269|consen 178 SIRDVKFSPGY-GNKFASIHDSGYLQLWDLRQPD-RCEKKLTAHNGPVLCLNWHPNREWLATGGRDKMVKIWDMTDSRAK 255 (839)
T ss_pred hhhceeeccCC-CceEEEecCCceEEEeeccCch-hHHHHhhcccCceEEEeecCCCceeeecCCCccEEEEeccCCCcc
Confidence 35678888865 7888998999999999999862 567788899999999999999999999999999999999865
Q ss_pred ----cc--ccceEEEEccCCC-EEEEEecCCceecCeeEEEeecCCCccee
Q psy7062 90 ----FI--QQVNALRITPDKQ-LLASAEELSCCYCGAAVFVYNSCYPAAVV 133 (148)
Q Consensus 90 ----~~--~~i~~~~~sp~~~-~l~~~~~d~~~~~~~~i~~~d~~~~~~~~ 133 (148)
+. .++.++.|-|..+ +|++++.-+ ...|++||++.+-.+.
T Consensus 256 ~~~tInTiapv~rVkWRP~~~~hLAtcsmv~----dtsV~VWDvrRPYIP~ 302 (839)
T KOG0269|consen 256 PKHTINTIAPVGRVKWRPARSYHLATCSMVV----DTSVHVWDVRRPYIPY 302 (839)
T ss_pred ceeEEeecceeeeeeeccCccchhhhhhccc----cceEEEEeeccccccc
Confidence 22 8899999999766 566655322 4479999999775443
No 67
>KOG1539|consensus
Probab=99.58 E-value=1.1e-14 Score=111.21 Aligned_cols=105 Identities=19% Similarity=0.413 Sum_probs=92.0
Q ss_pred cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----
Q psy7062 14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC---- 89 (148)
Q Consensus 14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~---- 89 (148)
..+..++.. ..+++.+.+|=.|+++|..+. +.++.+.+|+..|+.++|||||+|+++++.|++|++||+.++
T Consensus 537 ~~~iv~hr~--s~l~a~~~ddf~I~vvD~~t~--kvvR~f~gh~nritd~~FS~DgrWlisasmD~tIr~wDlpt~~lID 612 (910)
T KOG1539|consen 537 ITGIVYHRV--SDLLAIALDDFSIRVVDVVTR--KVVREFWGHGNRITDMTFSPDGRWLISASMDSTIRTWDLPTGTLID 612 (910)
T ss_pred cceeeeeeh--hhhhhhhcCceeEEEEEchhh--hhhHHhhccccceeeeEeCCCCcEEEEeecCCcEEEEeccCcceee
Confidence 456666665 778888888889999999998 899999999999999999999999999999999999999998
Q ss_pred -cc--ccceEEEEccCCCEEEEEecCCceecCeeEEEeecC
Q psy7062 90 -FI--QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSC 127 (148)
Q Consensus 90 -~~--~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~ 127 (148)
+. .++.++.|+|+|.+|+++..|. . -|++|--.
T Consensus 613 ~~~vd~~~~sls~SPngD~LAT~Hvd~----~-gIylWsNk 648 (910)
T KOG1539|consen 613 GLLVDSPCTSLSFSPNGDFLATVHVDQ----N-GIYLWSNK 648 (910)
T ss_pred eEecCCcceeeEECCCCCEEEEEEecC----c-eEEEEEch
Confidence 22 8899999999999999998865 3 48888643
No 68
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=99.57 E-value=3.5e-13 Score=92.81 Aligned_cols=111 Identities=20% Similarity=0.381 Sum_probs=94.6
Q ss_pred cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----
Q psy7062 14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC---- 89 (148)
Q Consensus 14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~---- 89 (148)
..+++|+++ ++++++++.++.+.+|++.+. +....+..|...+..+.|+|+++.+++++.++.+++||+...
T Consensus 12 i~~~~~~~~--~~~l~~~~~~g~i~i~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~~~~~~~~~~ 87 (289)
T cd00200 12 VTCVAFSPD--GKLLATGSGDGTIKVWDLETG--ELLRTLKGHTGPVRDVAASADGTYLASGSSDKTIRLWDLETGECVR 87 (289)
T ss_pred EEEEEEcCC--CCEEEEeecCcEEEEEEeeCC--CcEEEEecCCcceeEEEECCCCCEEEEEcCCCeEEEEEcCcccceE
Confidence 457777777 889999899999999999987 677788889999999999999999999999999999999874
Q ss_pred -cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceec
Q psy7062 90 -FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVA 134 (148)
Q Consensus 90 -~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~ 134 (148)
+. ..+.++.|+|+++.+++++.++ .+.+||+.+.+....
T Consensus 88 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~------~i~~~~~~~~~~~~~ 130 (289)
T cd00200 88 TLTGHTSYVSSVAFSPDGRILSSSSRDK------TIKVWDVETGKCLTT 130 (289)
T ss_pred EEeccCCcEEEEEEcCCCCEEEEecCCC------eEEEEECCCcEEEEE
Confidence 22 5799999999988888888777 899999986554443
No 69
>KOG0293|consensus
Probab=99.57 E-value=4.6e-14 Score=100.90 Aligned_cols=103 Identities=13% Similarity=0.154 Sum_probs=88.5
Q ss_pred EEEeCCCCccEEEEEecCCeEEEEeCCCCC-CCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----c
Q psy7062 17 TVFDSKHLVEMVAALGGYQHIRMYDFGSNN-PNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-----F 90 (148)
Q Consensus 17 ~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~-~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-----~ 90 (148)
+.|+++ |.+||+++.|.+..+|++..-. .+...++.+|...|..+.||||.+++++|+.+..+++||..++ +
T Consensus 230 l~FS~n--GkyLAsaSkD~Taiiw~v~~d~~~kl~~tlvgh~~~V~yi~wSPDdryLlaCg~~e~~~lwDv~tgd~~~~y 307 (519)
T KOG0293|consen 230 LQFSHN--GKYLASASKDSTAIIWIVVYDVHFKLKKTLVGHSQPVSYIMWSPDDRYLLACGFDEVLSLWDVDTGDLRHLY 307 (519)
T ss_pred EEEcCC--CeeEeeccCCceEEEEEEecCcceeeeeeeecccCceEEEEECCCCCeEEecCchHheeeccCCcchhhhhc
Confidence 344555 9999999999999999886431 2346788899999999999999999999999999999999998 2
Q ss_pred c----ccceEEEEccCCCEEEEEecCCceecCeeEEEeecC
Q psy7062 91 I----QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSC 127 (148)
Q Consensus 91 ~----~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~ 127 (148)
. ..+.+.+|.|||..+++|+.|+ ++..||+.
T Consensus 308 ~~~~~~S~~sc~W~pDg~~~V~Gs~dr------~i~~wdlD 342 (519)
T KOG0293|consen 308 PSGLGFSVSSCAWCPDGFRFVTGSPDR------TIIMWDLD 342 (519)
T ss_pred ccCcCCCcceeEEccCCceeEecCCCC------cEEEecCC
Confidence 2 5688899999999999999988 88889876
No 70
>KOG0303|consensus
Probab=99.57 E-value=2.9e-14 Score=101.31 Aligned_cols=114 Identities=16% Similarity=0.201 Sum_probs=95.5
Q ss_pred EEEEeCCCCccEEEEEecCCeEEEEeCCCCC-----CCceEEecCCCCCEEEEEEccC-CCEEEEEeCCCcEEEEECCcc
Q psy7062 16 STVFDSKHLVEMVAALGGYQHIRMYDFGSNN-----PNPVINCEGVSKNVVEVGFQED-GKWMFTGGEDCRARIWDLSLC 89 (148)
Q Consensus 16 ~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~-----~~~~~~~~~~~~~i~~~~~sp~-~~~l~~~~~~~~i~l~d~~~~ 89 (148)
.++|+|. +.+.+|+||+|.+|.+|++.... .+++..+.+|...|..+.|+|- .+.|++++.|+++.+||+.++
T Consensus 86 Di~w~Pf-nD~vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA~NVLlsag~Dn~v~iWnv~tg 164 (472)
T KOG0303|consen 86 DIDWCPF-NDCVIASGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTAPNVLLSAGSDNTVSIWNVGTG 164 (472)
T ss_pred ccccCcc-CCceeecCCCCceEEEEECCCcccccCcccceEEEeecceeEEEEeecccchhhHhhccCCceEEEEeccCC
Confidence 3455554 47889999999999999997542 1457788899999999999994 568899999999999999998
Q ss_pred -----cc--ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceeccC
Q psy7062 90 -----FI--QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVASN 136 (148)
Q Consensus 90 -----~~--~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~~ 136 (148)
+. .-|+++.|+-+|.+|++++.|. +|++||.+..+.+..-.
T Consensus 165 eali~l~hpd~i~S~sfn~dGs~l~TtckDK------kvRv~dpr~~~~v~e~~ 212 (472)
T KOG0303|consen 165 EALITLDHPDMVYSMSFNRDGSLLCTTCKDK------KVRVIDPRRGTVVSEGV 212 (472)
T ss_pred ceeeecCCCCeEEEEEeccCCceeeeecccc------eeEEEcCCCCcEeeecc
Confidence 22 7799999999999999999999 99999999887665443
No 71
>KOG0264|consensus
Probab=99.56 E-value=4.1e-14 Score=101.52 Aligned_cols=125 Identities=14% Similarity=0.216 Sum_probs=98.5
Q ss_pred EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCC-----CceEEecCCCCCEEEEEEcc-CCCEEEEEeCCCcEEEEECCc
Q psy7062 15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNP-----NPVINCEGVSKNVVEVGFQE-DGKWMFTGGEDCRARIWDLSL 88 (148)
Q Consensus 15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~-----~~~~~~~~~~~~i~~~~~sp-~~~~l~~~~~~~~i~l~d~~~ 88 (148)
..++|.+... ..|++++.|+++.+||+..... .+...+.+|...|..++|+| +...+.+++.|+.+.|||+|+
T Consensus 181 ~glsWn~~~~-g~Lls~~~d~~i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~ 259 (422)
T KOG0264|consen 181 YGLSWNRQQE-GTLLSGSDDHTICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRS 259 (422)
T ss_pred cccccccccc-eeEeeccCCCcEEEEeccccccCCccccceEEeecCCcceehhhccccchhhheeecCCCeEEEEEcCC
Confidence 4567776654 4556669999999999986522 24567788999999999999 556788999999999999995
Q ss_pred c-------cc---ccceEEEEcc-CCCEEEEEecCCceecCeeEEEeecCCCcceeccCcccCcceeec
Q psy7062 89 C-------FI---QQVNALRITP-DKQLLASAEELSCCYCGAAVFVYNSCYPAAVVASNTLVKPQVTRA 146 (148)
Q Consensus 89 ~-------~~---~~i~~~~~sp-~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~ 146 (148)
. .. +.++|++|+| ++..|++++.|+ +|++||+|+...+....+.+++.+.++
T Consensus 260 ~~~~~~~~~~ah~~~vn~~~fnp~~~~ilAT~S~D~------tV~LwDlRnL~~~lh~~e~H~dev~~V 322 (422)
T KOG0264|consen 260 NTSKPSHSVKAHSAEVNCVAFNPFNEFILATGSADK------TVALWDLRNLNKPLHTFEGHEDEVFQV 322 (422)
T ss_pred CCCCCcccccccCCceeEEEeCCCCCceEEeccCCC------cEEEeechhcccCceeccCCCcceEEE
Confidence 3 11 8899999999 777899999988 999999999887655555566655543
No 72
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=99.56 E-value=4.4e-13 Score=92.33 Aligned_cols=112 Identities=18% Similarity=0.332 Sum_probs=93.6
Q ss_pred cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----
Q psy7062 14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC---- 89 (148)
Q Consensus 14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~---- 89 (148)
..++.|+++ ++++++++.++.+.+||+++. +....+..|...+.+++|+|++.++++++.++.+++||++..
T Consensus 96 i~~~~~~~~--~~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~~~ 171 (289)
T cd00200 96 VSSVAFSPD--GRILSSSSRDKTIKVWDVETG--KCLTTLRGHTDWVNSVAFSPDGTFVASSSQDGTIKLWDLRTGKCVA 171 (289)
T ss_pred EEEEEEcCC--CCEEEEecCCCeEEEEECCCc--EEEEEeccCCCcEEEEEEcCcCCEEEEEcCCCcEEEEEccccccce
Confidence 355666666 788888677999999999977 777888889999999999999999999988999999999865
Q ss_pred -cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceecc
Q psy7062 90 -FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVAS 135 (148)
Q Consensus 90 -~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~ 135 (148)
+. ..+.++.|+|+++.+++++.++ .+++||.+..+.....
T Consensus 172 ~~~~~~~~i~~~~~~~~~~~l~~~~~~~------~i~i~d~~~~~~~~~~ 215 (289)
T cd00200 172 TLTGHTGEVNSVAFSPDGEKLLSSSSDG------TIKLWDLSTGKCLGTL 215 (289)
T ss_pred eEecCccccceEEECCCcCEEEEecCCC------cEEEEECCCCceecch
Confidence 22 5799999999999999998877 8999999865544433
No 73
>KOG1445|consensus
Probab=99.56 E-value=1.5e-14 Score=108.26 Aligned_cols=112 Identities=15% Similarity=0.216 Sum_probs=93.4
Q ss_pred CcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCC-----CceEEecCCCCCEEEEEEcc-CCCEEEEEeCCCcEEEEEC
Q psy7062 13 GQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNP-----NPVINCEGVSKNVVEVGFQE-DGKWMFTGGEDCRARIWDL 86 (148)
Q Consensus 13 ~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~-----~~~~~~~~~~~~i~~~~~sp-~~~~l~~~~~~~~i~l~d~ 86 (148)
....+.|+|-. .+.|+++++|+.|++|.+..+.. .+...+..|...|+++.|+| ....+++++.|.+|++||+
T Consensus 629 ~vtDl~WdPFD-~~rLAVa~ddg~i~lWr~~a~gl~e~~~tPe~~lt~h~eKI~slRfHPLAadvLa~asyd~Ti~lWDl 707 (1012)
T KOG1445|consen 629 LVTDLHWDPFD-DERLAVATDDGQINLWRLTANGLPENEMTPEKILTIHGEKITSLRFHPLAADVLAVASYDSTIELWDL 707 (1012)
T ss_pred eeeecccCCCC-hHHeeecccCceEEEEEeccCCCCcccCCcceeeecccceEEEEEecchhhhHhhhhhccceeeeeeh
Confidence 34567777743 67788889999999999975432 23456778999999999999 5668899999999999999
Q ss_pred Ccc-----cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcc
Q psy7062 87 SLC-----FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAA 131 (148)
Q Consensus 87 ~~~-----~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~ 131 (148)
.+. |. ..|..++|||+|+.+++.+.|| +|++|+.+....
T Consensus 708 ~~~~~~~~l~gHtdqIf~~AWSpdGr~~AtVcKDg------~~rVy~Prs~e~ 754 (1012)
T KOG1445|consen 708 ANAKLYSRLVGHTDQIFGIAWSPDGRRIATVCKDG------TLRVYEPRSREQ 754 (1012)
T ss_pred hhhhhhheeccCcCceeEEEECCCCcceeeeecCc------eEEEeCCCCCCC
Confidence 987 33 8899999999999999999999 999999886543
No 74
>KOG0313|consensus
Probab=99.55 E-value=9.6e-14 Score=98.16 Aligned_cols=105 Identities=17% Similarity=0.288 Sum_probs=89.6
Q ss_pred EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----
Q psy7062 15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC----- 89 (148)
Q Consensus 15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~----- 89 (148)
..+.|.. ...+++++.|.+|+.||+.++ ..+..+. ......+++++|..+.+++|+.|..+++||.+++
T Consensus 264 s~V~w~d---~~v~yS~SwDHTIk~WDletg--~~~~~~~-~~ksl~~i~~~~~~~Ll~~gssdr~irl~DPR~~~gs~v 337 (423)
T KOG0313|consen 264 SSVVWSD---ATVIYSVSWDHTIKVWDLETG--GLKSTLT-TNKSLNCISYSPLSKLLASGSSDRHIRLWDPRTGDGSVV 337 (423)
T ss_pred eeEEEcC---CCceEeecccceEEEEEeecc--cceeeee-cCcceeEeecccccceeeecCCCCceeecCCCCCCCcee
Confidence 4555655 456788899999999999998 6676765 4677899999999999999999999999999987
Q ss_pred ---cc---ccceEEEEcc-CCCEEEEEecCCceecCeeEEEeecCCCcc
Q psy7062 90 ---FI---QQVNALRITP-DKQLLASAEELSCCYCGAAVFVYNSCYPAA 131 (148)
Q Consensus 90 ---~~---~~i~~~~~sp-~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~ 131 (148)
|. ..+..+.|+| +..+|++++.|+ ++++||+++...
T Consensus 338 ~~s~~gH~nwVssvkwsp~~~~~~~S~S~D~------t~klWDvRS~k~ 380 (423)
T KOG0313|consen 338 SQSLIGHKNWVSSVKWSPTNEFQLVSGSYDN------TVKLWDVRSTKA 380 (423)
T ss_pred EEeeecchhhhhheecCCCCceEEEEEecCC------eEEEEEeccCCC
Confidence 22 8899999999 667899999988 999999998773
No 75
>KOG0643|consensus
Probab=99.54 E-value=2.8e-13 Score=92.27 Aligned_cols=71 Identities=14% Similarity=0.219 Sum_probs=66.5
Q ss_pred EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc
Q psy7062 15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC 89 (148)
Q Consensus 15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~ 89 (148)
..+.|..+ |++|.+++.|.+..+|-..++ +.+.++.+|++.|.+++.+-+.+.+++|+-|.+++|||++++
T Consensus 14 TqiKyN~e--GDLlFscaKD~~~~vw~s~nG--erlGty~GHtGavW~~Did~~s~~liTGSAD~t~kLWDv~tG 84 (327)
T KOG0643|consen 14 TQIKYNRE--GDLLFSCAKDSTPTVWYSLNG--ERLGTYDGHTGAVWCCDIDWDSKHLITGSADQTAKLWDVETG 84 (327)
T ss_pred ceEEecCC--CcEEEEecCCCCceEEEecCC--ceeeeecCCCceEEEEEecCCcceeeeccccceeEEEEcCCC
Confidence 45677776 999999999999999999888 999999999999999999999999999999999999999988
No 76
>KOG0296|consensus
Probab=99.54 E-value=3.5e-13 Score=94.93 Aligned_cols=112 Identities=8% Similarity=0.160 Sum_probs=96.9
Q ss_pred cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----
Q psy7062 14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC---- 89 (148)
Q Consensus 14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~---- 89 (148)
..++.|+.+ |.+||+|..+|.+++|+..++ .....+...-..+.=+.|+|.+..++.|+.||.+++|.+.+.
T Consensus 109 Vt~~~Fshd--gtlLATGdmsG~v~v~~~stg--~~~~~~~~e~~dieWl~WHp~a~illAG~~DGsvWmw~ip~~~~~k 184 (399)
T KOG0296|consen 109 VTCCSFSHD--GTLLATGDMSGKVLVFKVSTG--GEQWKLDQEVEDIEWLKWHPRAHILLAGSTDGSVWMWQIPSQALCK 184 (399)
T ss_pred eEEEEEccC--ceEEEecCCCccEEEEEcccC--ceEEEeecccCceEEEEecccccEEEeecCCCcEEEEECCCcceee
Confidence 345666666 999999999999999999998 666777656677888999999999999999999999999985
Q ss_pred -cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceecc
Q psy7062 90 -FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVAS 135 (148)
Q Consensus 90 -~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~ 135 (148)
+. .++.+-.|.|+|+.++++..|| +|++||+.+.++....
T Consensus 185 v~~Gh~~~ct~G~f~pdGKr~~tgy~dg------ti~~Wn~ktg~p~~~~ 228 (399)
T KOG0296|consen 185 VMSGHNSPCTCGEFIPDGKRILTGYDDG------TIIVWNPKTGQPLHKI 228 (399)
T ss_pred EecCCCCCcccccccCCCceEEEEecCc------eEEEEecCCCceeEEe
Confidence 33 8889999999999999999988 9999999988766544
No 77
>KOG0276|consensus
Probab=99.54 E-value=1.2e-13 Score=103.05 Aligned_cols=113 Identities=18% Similarity=0.273 Sum_probs=99.3
Q ss_pred EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----
Q psy7062 15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC----- 89 (148)
Q Consensus 15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~----- 89 (148)
.++.|-++ .+-+++|++|..|++|+.++. +.+.+|.+|..-|.+++++|..-+++++|.|.+|++||....
T Consensus 59 Ra~kfiaR--knWiv~GsDD~~IrVfnynt~--ekV~~FeAH~DyIR~iavHPt~P~vLtsSDDm~iKlW~we~~wa~~q 134 (794)
T KOG0276|consen 59 RAAKFIAR--KNWIVTGSDDMQIRVFNYNTG--EKVKTFEAHSDYIRSIAVHPTLPYVLTSSDDMTIKLWDWENEWACEQ 134 (794)
T ss_pred hhheeeec--cceEEEecCCceEEEEecccc--eeeEEeeccccceeeeeecCCCCeEEecCCccEEEEeeccCceeeee
Confidence 34455555 677899999999999999999 999999999999999999999999999999999999999987
Q ss_pred -cc---ccceEEEEcc-CCCEEEEEecCCceecCeeEEEeecCCCcceeccCc
Q psy7062 90 -FI---QQVNALRITP-DKQLLASAEELSCCYCGAAVFVYNSCYPAAVVASNT 137 (148)
Q Consensus 90 -~~---~~i~~~~~sp-~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~~~ 137 (148)
|+ ..+.+++|.| |.+.+++++-|+ +|++|.+-.+.+.-++++
T Consensus 135 tfeGH~HyVMqv~fnPkD~ntFaS~sLDr------TVKVWslgs~~~nfTl~g 181 (794)
T KOG0276|consen 135 TFEGHEHYVMQVAFNPKDPNTFASASLDR------TVKVWSLGSPHPNFTLEG 181 (794)
T ss_pred EEcCcceEEEEEEecCCCccceeeeeccc------cEEEEEcCCCCCceeeec
Confidence 54 8899999999 788999999999 999999887766555443
No 78
>KOG0305|consensus
Probab=99.54 E-value=1.5e-13 Score=101.68 Aligned_cols=122 Identities=16% Similarity=0.093 Sum_probs=97.1
Q ss_pred eeecCcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEcc-CCCEEEEE--eCCCcEEEEE
Q psy7062 9 LTAFGQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQE-DGKWMFTG--GEDCRARIWD 85 (148)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp-~~~~l~~~--~~~~~i~l~d 85 (148)
+..+.+..+.+....++.+||+|+.|+.+.+||.... +++..+..|...|..++||| ....|++| +.|+.|++||
T Consensus 297 ~~~H~qeVCgLkws~d~~~lASGgnDN~~~Iwd~~~~--~p~~~~~~H~aAVKA~awcP~q~~lLAsGGGs~D~~i~fwn 374 (484)
T KOG0305|consen 297 LQGHRQEVCGLKWSPDGNQLASGGNDNVVFIWDGLSP--EPKFTFTEHTAAVKALAWCPWQSGLLATGGGSADRCIKFWN 374 (484)
T ss_pred hhcccceeeeeEECCCCCeeccCCCccceEeccCCCc--cccEEEeccceeeeEeeeCCCccCceEEcCCCcccEEEEEE
Confidence 3445555555544444999999999999999999776 78888889999999999999 55677775 4689999999
Q ss_pred CCcc--cc-----ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceeccC
Q psy7062 86 LSLC--FI-----QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVASN 136 (148)
Q Consensus 86 ~~~~--~~-----~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~~ 136 (148)
..++ +. ..|+.+.|++..+.|+++-... ...|.+|+..+........
T Consensus 375 ~~~g~~i~~vdtgsQVcsL~Wsk~~kEi~sthG~s----~n~i~lw~~ps~~~~~~l~ 428 (484)
T KOG0305|consen 375 TNTGARIDSVDTGSQVCSLIWSKKYKELLSTHGYS----ENQITLWKYPSMKLVAELL 428 (484)
T ss_pred cCCCcEecccccCCceeeEEEcCCCCEEEEecCCC----CCcEEEEeccccceeeeec
Confidence 9988 22 8899999999998888876544 4589999998766655443
No 79
>KOG0267|consensus
Probab=99.53 E-value=1e-14 Score=110.03 Aligned_cols=110 Identities=25% Similarity=0.389 Sum_probs=96.2
Q ss_pred cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----
Q psy7062 14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC---- 89 (148)
Q Consensus 14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~---- 89 (148)
..++.|+.. ..+|++|+.+|+|++||++.. +.++++.+|...+..+.|+|-+.+.++++.|..+.+||++..
T Consensus 73 IeSl~f~~~--E~LlaagsasgtiK~wDleeA--k~vrtLtgh~~~~~sv~f~P~~~~~a~gStdtd~~iwD~Rk~Gc~~ 148 (825)
T KOG0267|consen 73 IESLTFDTS--ERLLAAGSASGTIKVWDLEEA--KIVRTLTGHLLNITSVDFHPYGEFFASGSTDTDLKIWDIRKKGCSH 148 (825)
T ss_pred ceeeecCcc--hhhhcccccCCceeeeehhhh--hhhhhhhccccCcceeeeccceEEeccccccccceehhhhccCcee
Confidence 457777776 788999999999999999998 888999999999999999999999999999999999999954
Q ss_pred -cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCccee
Q psy7062 90 -FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVV 133 (148)
Q Consensus 90 -~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~ 133 (148)
+. ..+..+.|+|+|++++.+++|. .+++||.+..+...
T Consensus 149 ~~~s~~~vv~~l~lsP~Gr~v~~g~ed~------tvki~d~~agk~~~ 190 (825)
T KOG0267|consen 149 TYKSHTRVVDVLRLSPDGRWVASGGEDN------TVKIWDLTAGKLSK 190 (825)
T ss_pred eecCCcceeEEEeecCCCceeeccCCcc------eeeeeccccccccc
Confidence 32 5577889999999999999977 99999997655443
No 80
>KOG1407|consensus
Probab=99.53 E-value=1.8e-13 Score=92.84 Aligned_cols=108 Identities=16% Similarity=0.121 Sum_probs=91.9
Q ss_pred EEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----c
Q psy7062 16 STVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-----F 90 (148)
Q Consensus 16 ~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-----~ 90 (148)
|+.|+|+ |++||+|+.|-.+.+||++.. -+++.+.-+.-.|..++||.||++|+++++|..|-+=+.+++ +
T Consensus 194 cI~f~p~--GryfA~GsADAlvSLWD~~EL--iC~R~isRldwpVRTlSFS~dg~~lASaSEDh~IDIA~vetGd~~~eI 269 (313)
T KOG1407|consen 194 CIEFDPD--GRYFATGSADALVSLWDVDEL--ICERCISRLDWPVRTLSFSHDGRMLASASEDHFIDIAEVETGDRVWEI 269 (313)
T ss_pred EEEECCC--CceEeeccccceeeccChhHh--hhheeeccccCceEEEEeccCcceeeccCccceEEeEecccCCeEEEe
Confidence 4455566 999999999999999999987 788999889999999999999999999999999999899888 3
Q ss_pred c--ccceEEEEccCCCEEEEEecCCce---ecCeeEEEeecC
Q psy7062 91 I--QQVNALRITPDKQLLASAEELSCC---YCGAAVFVYNSC 127 (148)
Q Consensus 91 ~--~~i~~~~~sp~~~~l~~~~~d~~~---~~~~~i~~~d~~ 127 (148)
+ ++...++|+|...+|+.++.|... ...+.++++-++
T Consensus 270 ~~~~~t~tVAWHPk~~LLAyA~ddk~~d~~reag~vKiFG~~ 311 (313)
T KOG1407|consen 270 PCEGPTFTVAWHPKRPLLAYACDDKDGDSNREAGTVKIFGLS 311 (313)
T ss_pred eccCCceeEEecCCCceeeEEecCCCCccccccceeEEecCC
Confidence 3 889999999999999999887732 122567776554
No 81
>KOG0282|consensus
Probab=99.53 E-value=1.3e-13 Score=99.84 Aligned_cols=107 Identities=14% Similarity=0.263 Sum_probs=92.2
Q ss_pred EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCC-CEEEEEeCCCcEEEEECCcc--cc
Q psy7062 15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDG-KWMFTGGEDCRARIWDLSLC--FI 91 (148)
Q Consensus 15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~-~~l~~~~~~~~i~l~d~~~~--~~ 91 (148)
..++|+.. |..+.+++-|+.+++||++++ +.+..+. ....++++.++|++ +.+++|..|+.|+.||++++ .+
T Consensus 262 rd~~~s~~--g~~fLS~sfD~~lKlwDtETG--~~~~~f~-~~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~kvvq 336 (503)
T KOG0282|consen 262 RDASFNNC--GTSFLSASFDRFLKLWDTETG--QVLSRFH-LDKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGKVVQ 336 (503)
T ss_pred hhhhcccc--CCeeeeeecceeeeeeccccc--eEEEEEe-cCCCceeeecCCCCCcEEEEecCCCcEEEEeccchHHHH
Confidence 34555555 888888899999999999999 7888876 46778999999988 78999999999999999999 22
Q ss_pred ------ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcce
Q psy7062 92 ------QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAV 132 (148)
Q Consensus 92 ------~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~ 132 (148)
+.+..+.|-++++.++++++|+ .+++|+.+.+.++
T Consensus 337 eYd~hLg~i~~i~F~~~g~rFissSDdk------s~riWe~~~~v~i 377 (503)
T KOG0282|consen 337 EYDRHLGAILDITFVDEGRRFISSSDDK------SVRIWENRIPVPI 377 (503)
T ss_pred HHHhhhhheeeeEEccCCceEeeeccCc------cEEEEEcCCCccc
Confidence 8899999999999999999988 9999998876544
No 82
>KOG0639|consensus
Probab=99.53 E-value=3.5e-14 Score=103.80 Aligned_cols=110 Identities=23% Similarity=0.308 Sum_probs=96.7
Q ss_pred CcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc---
Q psy7062 13 GQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC--- 89 (148)
Q Consensus 13 ~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~--- 89 (148)
++.|.+.+.+.+.+++.+++.||.|.+||+.+. ..+++|++|+..+.+|.+++||..|-+|+.|++++.||++.+
T Consensus 509 apaCyALa~spDakvcFsccsdGnI~vwDLhnq--~~VrqfqGhtDGascIdis~dGtklWTGGlDntvRcWDlregrql 586 (705)
T KOG0639|consen 509 APACYALAISPDAKVCFSCCSDGNIAVWDLHNQ--TLVRQFQGHTDGASCIDISKDGTKLWTGGLDNTVRCWDLREGRQL 586 (705)
T ss_pred chhhhhhhcCCccceeeeeccCCcEEEEEcccc--eeeecccCCCCCceeEEecCCCceeecCCCccceeehhhhhhhhh
Confidence 456777766666899999999999999999988 889999999999999999999999999999999999999988
Q ss_pred ----ccccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062 90 ----FIQQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA 130 (148)
Q Consensus 90 ----~~~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~ 130 (148)
|.+.|.++.+.|++.++++|-+++ .+.+...+.+.
T Consensus 587 qqhdF~SQIfSLg~cP~~dWlavGMens------~vevlh~skp~ 625 (705)
T KOG0639|consen 587 QQHDFSSQIFSLGYCPTGDWLAVGMENS------NVEVLHTSKPE 625 (705)
T ss_pred hhhhhhhhheecccCCCccceeeecccC------cEEEEecCCcc
Confidence 348899999999999999999866 67777666544
No 83
>KOG0275|consensus
Probab=99.52 E-value=1.9e-14 Score=100.48 Aligned_cols=110 Identities=15% Similarity=0.205 Sum_probs=92.8
Q ss_pred cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCc------eEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECC
Q psy7062 14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNP------VINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLS 87 (148)
Q Consensus 14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~------~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~ 87 (148)
..|..|+|+ |++|++|+-||-+.+||.-+++.+. ...+-.+...|.+++||.|..++++|+.||.|++|.++
T Consensus 216 ~EcA~FSPD--gqyLvsgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsEMlAsGsqDGkIKvWri~ 293 (508)
T KOG0275|consen 216 VECARFSPD--GQYLVSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSEMLASGSQDGKIKVWRIE 293 (508)
T ss_pred hhheeeCCC--CceEeeccccceeeeehhccchhhhhhhhhhhcceeecccceEEEeecccHHHhhccCcCCcEEEEEEe
Confidence 468889999 9999999999999999999883221 11223367899999999999999999999999999999
Q ss_pred cc-----cc----ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcc
Q psy7062 88 LC-----FI----QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAA 131 (148)
Q Consensus 88 ~~-----~~----~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~ 131 (148)
++ |. ..++|+.|+.|+.++++++.|- ++++--+.+.+.
T Consensus 294 tG~ClRrFdrAHtkGvt~l~FSrD~SqiLS~sfD~------tvRiHGlKSGK~ 340 (508)
T KOG0275|consen 294 TGQCLRRFDRAHTKGVTCLSFSRDNSQILSASFDQ------TVRIHGLKSGKC 340 (508)
T ss_pred cchHHHHhhhhhccCeeEEEEccCcchhhcccccc------eEEEeccccchh
Confidence 98 43 7899999999999999999977 788877665543
No 84
>KOG0973|consensus
Probab=99.52 E-value=2.2e-13 Score=106.27 Aligned_cols=107 Identities=14% Similarity=0.165 Sum_probs=93.8
Q ss_pred cEEEEEeCCCCccEEEEEecCCeEEEEeCCC-----CC-----------CCceEEecCCCCCEEEEEEccCCCEEEEEeC
Q psy7062 14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGS-----NN-----------PNPVINCEGVSKNVVEVGFQEDGKWMFTGGE 77 (148)
Q Consensus 14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~-----~~-----------~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~ 77 (148)
..|+.|+++ |++||+|++|+.|.+|.... .. .+....+.+|...|..++|+|++.++++++.
T Consensus 72 v~CVR~S~d--G~~lAsGSDD~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~~~lvS~s~ 149 (942)
T KOG0973|consen 72 VNCVRFSPD--GSYLASGSDDRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPDDSLLVSVSL 149 (942)
T ss_pred eeEEEECCC--CCeEeeccCcceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCCCccEEEEecc
Confidence 567889998 99999999999999999883 00 1246678899999999999999999999999
Q ss_pred CCcEEEEECCcc-----cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCC
Q psy7062 78 DCRARIWDLSLC-----FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCY 128 (148)
Q Consensus 78 ~~~i~l~d~~~~-----~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~ 128 (148)
|+++.+|+.++. +. ..+-.+.|.|-|++|++-+.|+ +|++|+..+
T Consensus 150 DnsViiwn~~tF~~~~vl~~H~s~VKGvs~DP~Gky~ASqsdDr------tikvwrt~d 202 (942)
T KOG0973|consen 150 DNSVIIWNAKTFELLKVLRGHQSLVKGVSWDPIGKYFASQSDDR------TLKVWRTSD 202 (942)
T ss_pred cceEEEEccccceeeeeeecccccccceEECCccCeeeeecCCc------eEEEEEccc
Confidence 999999999988 32 7788999999999999999999 999999654
No 85
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=99.52 E-value=1e-12 Score=88.02 Aligned_cols=107 Identities=13% Similarity=0.235 Sum_probs=82.6
Q ss_pred cEEEEEeCCCCccEEEE--EecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCC---CcEEEEECCc
Q psy7062 14 QISTVFDSKHLVEMVAA--LGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGED---CRARIWDLSL 88 (148)
Q Consensus 14 ~~~~~~~~~~~~~~l~~--~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~---~~i~l~d~~~ 88 (148)
...++|+|+ ++.+++ |..+..+.+||++. +.+..+. ...+..+.|+|+|++++.++.+ |.+.+||.++
T Consensus 62 I~~~~WsP~--g~~favi~g~~~~~v~lyd~~~---~~i~~~~--~~~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~ 134 (194)
T PF08662_consen 62 IHDVAWSPN--GNEFAVIYGSMPAKVTLYDVKG---KKIFSFG--TQPRNTISWSPDGRFLVLAGFGNLNGDLEFWDVRK 134 (194)
T ss_pred eEEEEECcC--CCEEEEEEccCCcccEEEcCcc---cEeEeec--CCCceEEEECCCCCEEEEEEccCCCcEEEEEECCC
Confidence 578888888 555443 33556899999973 5677764 4567889999999999998754 6799999987
Q ss_pred c-----cc-ccceEEEEccCCCEEEEEecCCceecCeeEEEeecC
Q psy7062 89 C-----FI-QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSC 127 (148)
Q Consensus 89 ~-----~~-~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~ 127 (148)
. +. ..+..++|+|+|++++++...........+++|+..
T Consensus 135 ~~~i~~~~~~~~t~~~WsPdGr~~~ta~t~~r~~~dng~~Iw~~~ 179 (194)
T PF08662_consen 135 KKKISTFEHSDATDVEWSPDGRYLATATTSPRLRVDNGFKIWSFQ 179 (194)
T ss_pred CEEeeccccCcEEEEEEcCCCCEEEEEEeccceeccccEEEEEec
Confidence 7 22 567899999999999999876544445578999986
No 86
>KOG0270|consensus
Probab=99.52 E-value=2.9e-13 Score=97.30 Aligned_cols=106 Identities=11% Similarity=0.236 Sum_probs=90.0
Q ss_pred EEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEcc-CCCEEEEEeCCCcEEEEECCcc-----
Q psy7062 16 STVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQE-DGKWMFTGGEDCRARIWDLSLC----- 89 (148)
Q Consensus 16 ~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp-~~~~l~~~~~~~~i~l~d~~~~----- 89 (148)
.++|.... ..+||+||.|.+|++||+.++ ++..++.-|...|.++.|+| .+..+++|+.|+++.+.|++..
T Consensus 248 ~Ls~n~~~-~nVLaSgsaD~TV~lWD~~~g--~p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~~s~~ 324 (463)
T KOG0270|consen 248 ALSWNRNF-RNVLASGSADKTVKLWDVDTG--KPKSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDPSNSGK 324 (463)
T ss_pred HHHhcccc-ceeEEecCCCceEEEEEcCCC--CcceehhhcCCceeEEEecCCCceEEEeccccceEEeeeccCccccCc
Confidence 34444332 789999999999999999999 88888888999999999998 6779999999999999999944
Q ss_pred -cc--ccceEEEEccC-CCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062 90 -FI--QQVNALRITPD-KQLLASAEELSCCYCGAAVFVYNSCYPA 130 (148)
Q Consensus 90 -~~--~~i~~~~~sp~-~~~l~~~~~d~~~~~~~~i~~~d~~~~~ 130 (148)
++ +.+-.++|.|. ...++++..|| +++-+|.|.+.
T Consensus 325 ~wk~~g~VEkv~w~~~se~~f~~~tddG------~v~~~D~R~~~ 363 (463)
T KOG0270|consen 325 EWKFDGEVEKVAWDPHSENSFFVSTDDG------TVYYFDIRNPG 363 (463)
T ss_pred eEEeccceEEEEecCCCceeEEEecCCc------eEEeeecCCCC
Confidence 22 88999999994 45777888888 99999999884
No 87
>KOG0281|consensus
Probab=99.52 E-value=8.9e-14 Score=97.84 Aligned_cols=99 Identities=17% Similarity=0.311 Sum_probs=82.7
Q ss_pred ccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc--------cc---cc
Q psy7062 25 VEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC--------FI---QQ 93 (148)
Q Consensus 25 ~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~--------~~---~~ 93 (148)
..++++|+.|.+|++||++++ +++.++-.|...|..+.|+ ..++++++.|.++.+||+.+. +. ..
T Consensus 247 ~rviisGSSDsTvrvWDv~tg--e~l~tlihHceaVLhlrf~--ng~mvtcSkDrsiaVWdm~sps~it~rrVLvGHrAa 322 (499)
T KOG0281|consen 247 ERVIVSGSSDSTVRVWDVNTG--EPLNTLIHHCEAVLHLRFS--NGYMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAA 322 (499)
T ss_pred ceEEEecCCCceEEEEeccCC--chhhHHhhhcceeEEEEEe--CCEEEEecCCceeEEEeccCchHHHHHHHHhhhhhh
Confidence 569999999999999999999 9999998899999888884 568999999999999999877 22 66
Q ss_pred ceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceecc
Q psy7062 94 VNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVAS 135 (148)
Q Consensus 94 i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~ 135 (148)
++.+.| +.+++++++.|+ +|++|+..+..-+..+
T Consensus 323 VNvVdf--d~kyIVsASgDR------TikvW~~st~efvRtl 356 (499)
T KOG0281|consen 323 VNVVDF--DDKYIVSASGDR------TIKVWSTSTCEFVRTL 356 (499)
T ss_pred eeeecc--ccceEEEecCCc------eEEEEeccceeeehhh
Confidence 777777 566899999888 9999998776655443
No 88
>KOG0294|consensus
Probab=99.51 E-value=2.8e-13 Score=93.95 Aligned_cols=105 Identities=18% Similarity=0.212 Sum_probs=91.1
Q ss_pred EEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCC--EEEEEeCCCcEEEEECCcc----
Q psy7062 16 STVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGK--WMFTGGEDCRARIWDLSLC---- 89 (148)
Q Consensus 16 ~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~--~l~~~~~~~~i~l~d~~~~---- 89 (148)
..+...+ +.++|+|+.|.+|++||++.. ..+..+..|.+.|+++.|.+.-. .|++|+.||.|.+|+..+.
T Consensus 46 itavAVs--~~~~aSGssDetI~IYDm~k~--~qlg~ll~HagsitaL~F~~~~S~shLlS~sdDG~i~iw~~~~W~~~~ 121 (362)
T KOG0294|consen 46 ITALAVS--GPYVASGSSDETIHIYDMRKR--KQLGILLSHAGSITALKFYPPLSKSHLLSGSDDGHIIIWRVGSWELLK 121 (362)
T ss_pred eeEEEec--ceeEeccCCCCcEEEEeccch--hhhcceeccccceEEEEecCCcchhheeeecCCCcEEEEEcCCeEEee
Confidence 3333444 789999999999999999988 77888888999999999998665 9999999999999999887
Q ss_pred -cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062 90 -FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA 130 (148)
Q Consensus 90 -~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~ 130 (148)
+. ++++.++.+|.++.-++.+.|+ .++.||+-.++
T Consensus 122 slK~H~~~Vt~lsiHPS~KLALsVg~D~------~lr~WNLV~Gr 160 (362)
T KOG0294|consen 122 SLKAHKGQVTDLSIHPSGKLALSVGGDQ------VLRTWNLVRGR 160 (362)
T ss_pred eecccccccceeEecCCCceEEEEcCCc------eeeeehhhcCc
Confidence 33 7799999999999999999988 89999976554
No 89
>KOG0310|consensus
Probab=99.50 E-value=1.3e-13 Score=99.91 Aligned_cols=106 Identities=17% Similarity=0.244 Sum_probs=89.8
Q ss_pred EEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCC-EEEEEeCCCcEEEEECCcc-----c
Q psy7062 17 TVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGK-WMFTGGEDCRARIWDLSLC-----F 90 (148)
Q Consensus 17 ~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~-~l~~~~~~~~i~l~d~~~~-----~ 90 (148)
.+.+..++|.+|+.|.+.|.|++||.++. ..++.+.+|+..+..+.|+|.++ .+++|+.|+.+++||+.+. +
T Consensus 72 ~s~~fR~DG~LlaaGD~sG~V~vfD~k~r--~iLR~~~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a~v~~~l 149 (487)
T KOG0310|consen 72 YSVDFRSDGRLLAAGDESGHVKVFDMKSR--VILRQLYAHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTAYVQAEL 149 (487)
T ss_pred eEEEeecCCeEEEccCCcCcEEEeccccH--HHHHHHhhccCceeEEEecccCCeEEEecCCCceEEEEEcCCcEEEEEe
Confidence 33344455999999999999999998776 67899999999999999999655 6677888899999999887 2
Q ss_pred c---ccceEEEEcc-CCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062 91 I---QQVNALRITP-DKQLLASAEELSCCYCGAAVFVYNSCYPA 130 (148)
Q Consensus 91 ~---~~i~~~~~sp-~~~~l~~~~~d~~~~~~~~i~~~d~~~~~ 130 (148)
. ..+++.+|+| ++..+++|+-|| +|++||.+...
T Consensus 150 ~~htDYVR~g~~~~~~~hivvtGsYDg------~vrl~DtR~~~ 187 (487)
T KOG0310|consen 150 SGHTDYVRCGDISPANDHIVVTGSYDG------KVRLWDTRSLT 187 (487)
T ss_pred cCCcceeEeeccccCCCeEEEecCCCc------eEEEEEeccCC
Confidence 2 8899999999 556889999988 99999999773
No 90
>KOG0305|consensus
Probab=99.50 E-value=4.1e-13 Score=99.45 Aligned_cols=112 Identities=17% Similarity=0.244 Sum_probs=98.0
Q ss_pred CcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecC-CCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc--
Q psy7062 13 GQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEG-VSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-- 89 (148)
Q Consensus 13 ~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~-~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-- 89 (148)
....+.|+++ |.+|++|..+|.+.+||..+. +.+..+.+ |...|.+++|+ +..+.+|+.++.|..+|++..
T Consensus 219 ~vtSv~ws~~--G~~LavG~~~g~v~iwD~~~~--k~~~~~~~~h~~rvg~laW~--~~~lssGsr~~~I~~~dvR~~~~ 292 (484)
T KOG0305|consen 219 LVTSVKWSPD--GSHLAVGTSDGTVQIWDVKEQ--KKTRTLRGSHASRVGSLAWN--SSVLSSGSRDGKILNHDVRISQH 292 (484)
T ss_pred ceEEEEECCC--CCEEEEeecCCeEEEEehhhc--cccccccCCcCceeEEEecc--CceEEEecCCCcEEEEEEecchh
Confidence 3567777777 999999999999999999988 78888888 99999999997 788899999999999999987
Q ss_pred ----cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceeccC
Q psy7062 90 ----FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVASN 136 (148)
Q Consensus 90 ----~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~~ 136 (148)
+. +.++.+.|++|++++++|+.|. .+.+||...+.+...+.
T Consensus 293 ~~~~~~~H~qeVCgLkws~d~~~lASGgnDN------~~~Iwd~~~~~p~~~~~ 340 (484)
T KOG0305|consen 293 VVSTLQGHRQEVCGLKWSPDGNQLASGGNDN------VVFIWDGLSPEPKFTFT 340 (484)
T ss_pred hhhhhhcccceeeeeEECCCCCeeccCCCcc------ceEeccCCCccccEEEe
Confidence 22 8899999999999999999988 99999997666655443
No 91
>KOG1063|consensus
Probab=99.50 E-value=4.3e-13 Score=100.94 Aligned_cols=109 Identities=18% Similarity=0.251 Sum_probs=92.3
Q ss_pred CcEEEEEeCCCCccEEEEEecCC-----eEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECC
Q psy7062 13 GQISTVFDSKHLVEMVAALGGYQ-----HIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLS 87 (148)
Q Consensus 13 ~~~~~~~~~~~~~~~l~~~~~d~-----~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~ 87 (148)
+...++.+.++.++++|+++... .|++|+..+. ..+..+.+|.-.|+.++|||||++|++.++|.++.+|...
T Consensus 525 GyEv~~l~~s~~gnliASaCKS~~~ehAvI~lw~t~~W--~~~~~L~~HsLTVT~l~FSpdg~~LLsvsRDRt~sl~~~~ 602 (764)
T KOG1063|consen 525 GYEVYALAISPTGNLIASACKSSLKEHAVIRLWNTANW--LQVQELEGHSLTVTRLAFSPDGRYLLSVSRDRTVSLYEVQ 602 (764)
T ss_pred ceeEEEEEecCCCCEEeehhhhCCccceEEEEEeccch--hhhheecccceEEEEEEECCCCcEEEEeecCceEEeeeee
Confidence 33455555555599999988665 5999999987 6777889999999999999999999999999999999986
Q ss_pred cc------cc------ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCC
Q psy7062 88 LC------FI------QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYP 129 (148)
Q Consensus 88 ~~------~~------~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~ 129 (148)
.. |. .-|+...|+|++.+++++++|. +|++|..+..
T Consensus 603 ~~~~~e~~fa~~k~HtRIIWdcsW~pde~~FaTaSRDK------~VkVW~~~~~ 650 (764)
T KOG1063|consen 603 EDIKDEFRFACLKAHTRIIWDCSWSPDEKYFATASRDK------KVKVWEEPDL 650 (764)
T ss_pred cccchhhhhccccccceEEEEcccCcccceeEEecCCc------eEEEEeccCc
Confidence 55 22 5588899999999999999999 9999998766
No 92
>KOG1274|consensus
Probab=99.49 E-value=1e-12 Score=101.36 Aligned_cols=105 Identities=16% Similarity=0.308 Sum_probs=93.1
Q ss_pred cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----
Q psy7062 14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC---- 89 (148)
Q Consensus 14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~---- 89 (148)
..+++|+.+ |.+++.||+|-.|++-+.... .....+.+|...|.++.|+|+++++++.+.||.+++||+.++
T Consensus 99 ~r~~~v~g~--g~~iaagsdD~~vK~~~~~D~--s~~~~lrgh~apVl~l~~~p~~~fLAvss~dG~v~iw~~~~~~~~~ 174 (933)
T KOG1274|consen 99 IRDLAVSGS--GKMIAAGSDDTAVKLLNLDDS--SQEKVLRGHDAPVLQLSYDPKGNFLAVSSCDGKVQIWDLQDGILSK 174 (933)
T ss_pred ceEEEEecC--CcEEEeecCceeEEEEecccc--chheeecccCCceeeeeEcCCCCEEEEEecCceEEEEEcccchhhh
Confidence 467788877 999999999999999999988 788899999999999999999999999999999999999876
Q ss_pred -------------------------------------------------cc-------ccceEEEEccCCCEEEEEecCC
Q psy7062 90 -------------------------------------------------FI-------QQVNALRITPDKQLLASAEELS 113 (148)
Q Consensus 90 -------------------------------------------------~~-------~~i~~~~~sp~~~~l~~~~~d~ 113 (148)
|. ..+..+.|+|+|++|++++.++
T Consensus 175 tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~~d~~Vkvy~r~~we~~f~Lr~~~~ss~~~~~~wsPnG~YiAAs~~~g 254 (933)
T KOG1274|consen 175 TLTGVDKDNEFILSRICTRLAWHPKGGTLAVPPVDNTVKVYSRKGWELQFKLRDKLSSSKFSDLQWSPNGKYIAASTLDG 254 (933)
T ss_pred hcccCCccccccccceeeeeeecCCCCeEEeeccCCeEEEEccCCceeheeecccccccceEEEEEcCCCcEEeeeccCC
Confidence 00 3477889999999999999888
Q ss_pred ceecCeeEEEeecCC
Q psy7062 114 CCYCGAAVFVYNSCY 128 (148)
Q Consensus 114 ~~~~~~~i~~~d~~~ 128 (148)
.|.+||+.+
T Consensus 255 ------~I~vWnv~t 263 (933)
T KOG1274|consen 255 ------QILVWNVDT 263 (933)
T ss_pred ------cEEEEeccc
Confidence 899999884
No 93
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.49 E-value=2.9e-12 Score=101.79 Aligned_cols=107 Identities=25% Similarity=0.415 Sum_probs=87.8
Q ss_pred EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----
Q psy7062 15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC----- 89 (148)
Q Consensus 15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~----- 89 (148)
.++.|.+ ..+.++++|+.|+.|++||++... ..+..+.+|...|..+.|. ++..+++++.|+++++||++..
T Consensus 621 ~~v~~~~-~~g~~latgs~dg~I~iwD~~~~~-~~~~~~~~h~~~V~~v~f~-~~~~lvs~s~D~~ikiWd~~~~~~~~~ 697 (793)
T PLN00181 621 CCVQFPS-ESGRSLAFGSADHKVYYYDLRNPK-LPLCTMIGHSKTVSYVRFV-DSSTLVSSSTDNTLKLWDLSMSISGIN 697 (793)
T ss_pred EEEEEeC-CCCCEEEEEeCCCeEEEEECCCCC-ccceEecCCCCCEEEEEEe-CCCEEEEEECCCEEEEEeCCCCccccC
Confidence 3455543 238899999999999999998761 2566778899999999997 7889999999999999999742
Q ss_pred ------cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062 90 ------FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA 130 (148)
Q Consensus 90 ------~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~ 130 (148)
+. ..+..+.|+|++++|++++.|+ .|++|+...+.
T Consensus 698 ~~~l~~~~gh~~~i~~v~~s~~~~~lasgs~D~------~v~iw~~~~~~ 741 (793)
T PLN00181 698 ETPLHSFMGHTNVKNFVGLSVSDGYIATGSETN------EVFVYHKAFPM 741 (793)
T ss_pred CcceEEEcCCCCCeeEEEEcCCCCEEEEEeCCC------EEEEEECCCCC
Confidence 22 5578899999999999999988 99999976554
No 94
>KOG4283|consensus
Probab=99.49 E-value=2.8e-13 Score=93.52 Aligned_cols=98 Identities=26% Similarity=0.357 Sum_probs=85.1
Q ss_pred ccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCE-EEEEeCCCcEEEEECCcc--------------
Q psy7062 25 VEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKW-MFTGGEDCRARIWDLSLC-------------- 89 (148)
Q Consensus 25 ~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~-l~~~~~~~~i~l~d~~~~-------------- 89 (148)
.-++|+|..+-.|++.|+.++ ....++++|...|.++.|||...+ |++|+.||.+++||++.-
T Consensus 158 HcLiA~gtr~~~VrLCDi~SG--s~sH~LsGHr~~vlaV~Wsp~~e~vLatgsaDg~irlWDiRrasgcf~~lD~hn~k~ 235 (397)
T KOG4283|consen 158 HCLIAAGTRDVQVRLCDIASG--SFSHTLSGHRDGVLAVEWSPSSEWVLATGSADGAIRLWDIRRASGCFRVLDQHNTKR 235 (397)
T ss_pred ceEEEEecCCCcEEEEeccCC--cceeeeccccCceEEEEeccCceeEEEecCCCceEEEEEeecccceeEEeecccCcc
Confidence 346778778889999999999 899999999999999999998775 588999999999999864
Q ss_pred ---cc------ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062 90 ---FI------QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA 130 (148)
Q Consensus 90 ---~~------~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~ 130 (148)
++ +.++.++|+.++.++++.+.|. ++++|+..+.+
T Consensus 236 ~p~~~~n~ah~gkvngla~tSd~~~l~~~gtd~------r~r~wn~~~G~ 279 (397)
T KOG4283|consen 236 PPILKTNTAHYGKVNGLAWTSDARYLASCGTDD------RIRVWNMESGR 279 (397)
T ss_pred CccccccccccceeeeeeecccchhhhhccCcc------ceEEeecccCc
Confidence 11 6788999999999999999977 89999977654
No 95
>KOG1034|consensus
Probab=99.49 E-value=2.2e-13 Score=94.97 Aligned_cols=103 Identities=21% Similarity=0.271 Sum_probs=90.3
Q ss_pred eCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccC-CCEEEEEeCCCcEEEEECCcc-----cc--
Q psy7062 20 DSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQED-GKWMFTGGEDCRARIWDLSLC-----FI-- 91 (148)
Q Consensus 20 ~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~-~~~l~~~~~~~~i~l~d~~~~-----~~-- 91 (148)
+......++|+++.-|.|++.|+.+. +....+.+|...|..+.++|+ .++++++|.|..+++|++++. |.
T Consensus 100 d~~~~~p~la~~G~~GvIrVid~~~~--~~~~~~~ghG~sINeik~~p~~~qlvls~SkD~svRlwnI~~~~Cv~VfGG~ 177 (385)
T KOG1034|consen 100 DSNTGNPFLAAGGYLGVIRVIDVVSG--QCSKNYRGHGGSINEIKFHPDRPQLVLSASKDHSVRLWNIQTDVCVAVFGGV 177 (385)
T ss_pred cCCCCCeeEEeecceeEEEEEecchh--hhccceeccCccchhhhcCCCCCcEEEEecCCceEEEEeccCCeEEEEeccc
Confidence 34434678888888899999999988 888899999999999999995 579999999999999999998 22
Q ss_pred ----ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062 92 ----QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA 130 (148)
Q Consensus 92 ----~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~ 130 (148)
..+.++.|++++.++++++.|- ++++|++..++
T Consensus 178 egHrdeVLSvD~~~~gd~i~ScGmDh------slk~W~l~~~~ 214 (385)
T KOG1034|consen 178 EGHRDEVLSVDFSLDGDRIASCGMDH------SLKLWRLNVKE 214 (385)
T ss_pred ccccCcEEEEEEcCCCCeeeccCCcc------eEEEEecChhH
Confidence 7799999999999999999988 99999998544
No 96
>KOG1332|consensus
Probab=99.49 E-value=4.7e-13 Score=90.13 Aligned_cols=103 Identities=18% Similarity=0.190 Sum_probs=87.0
Q ss_pred CCCCccEEEEEecCCeEEEEeCCCCCC-CceEEecCCCCCEEEEEEcc--CCCEEEEEeCCCcEEEEECCcc-------c
Q psy7062 21 SKHLVEMVAALGGYQHIRMYDFGSNNP-NPVINCEGVSKNVVEVGFQE--DGKWMFTGGEDCRARIWDLSLC-------F 90 (148)
Q Consensus 21 ~~~~~~~l~~~~~d~~v~~~d~~~~~~-~~~~~~~~~~~~i~~~~~sp--~~~~l~~~~~~~~i~l~d~~~~-------~ 90 (148)
-+-.|..|++++.|++|++|.++.... ..+.++.+|.+.+..++|.. -|.+|++++.|+.+.+|.-..+ +
T Consensus 19 lDyygkrlATcsSD~tVkIf~v~~n~~s~ll~~L~Gh~GPVwqv~wahPk~G~iLAScsYDgkVIiWke~~g~w~k~~e~ 98 (299)
T KOG1332|consen 19 LDYYGKRLATCSSDGTVKIFEVRNNGQSKLLAELTGHSGPVWKVAWAHPKFGTILASCSYDGKVIIWKEENGRWTKAYEH 98 (299)
T ss_pred hhhhcceeeeecCCccEEEEEEcCCCCceeeeEecCCCCCeeEEeecccccCcEeeEeecCceEEEEecCCCchhhhhhh
Confidence 344589999999999999999987643 56789999999999999964 7999999999999999999887 1
Q ss_pred c---ccceEEEEccC--CCEEEEEecCCceecCeeEEEeecCCC
Q psy7062 91 I---QQVNALRITPD--KQLLASAEELSCCYCGAAVFVYNSCYP 129 (148)
Q Consensus 91 ~---~~i~~~~~sp~--~~~l~~~~~d~~~~~~~~i~~~d~~~~ 129 (148)
. ..+++++|.|. |-.|++++.|| .|.+.+.+..
T Consensus 99 ~~h~~SVNsV~wapheygl~LacasSDG------~vsvl~~~~~ 136 (299)
T KOG1332|consen 99 AAHSASVNSVAWAPHEYGLLLACASSDG------KVSVLTYDSS 136 (299)
T ss_pred hhhcccceeecccccccceEEEEeeCCC------cEEEEEEcCC
Confidence 1 88999999984 56899999999 7777766544
No 97
>KOG2110|consensus
Probab=99.47 E-value=2.5e-12 Score=90.81 Aligned_cols=107 Identities=18% Similarity=0.259 Sum_probs=92.0
Q ss_pred EEEEEeCCCCccEEEEEe--cCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCc-EEEEECCcc--
Q psy7062 15 ISTVFDSKHLVEMVAALG--GYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCR-ARIWDLSLC-- 89 (148)
Q Consensus 15 ~~~~~~~~~~~~~l~~~~--~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~-i~l~d~~~~-- 89 (148)
..+|++++..+.+|+.-+ ..|.|.+||..+- ++...+..|.+.+.+++|+++|.++++++..|+ ||+|.+.++
T Consensus 131 gl~AlS~n~~n~ylAyp~s~t~GdV~l~d~~nl--~~v~~I~aH~~~lAalafs~~G~llATASeKGTVIRVf~v~~G~k 208 (391)
T KOG2110|consen 131 GLCALSPNNANCYLAYPGSTTSGDVVLFDTINL--QPVNTINAHKGPLAALAFSPDGTLLATASEKGTVIRVFSVPEGQK 208 (391)
T ss_pred ceEeeccCCCCceEEecCCCCCceEEEEEcccc--eeeeEEEecCCceeEEEECCCCCEEEEeccCceEEEEEEcCCccE
Confidence 467888887777888733 2358999999988 889999999999999999999999999999986 779999888
Q ss_pred ---cc-----ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCC
Q psy7062 90 ---FI-----QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYP 129 (148)
Q Consensus 90 ---~~-----~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~ 129 (148)
|. ..|.+++|+|++++|.+++..+ +|+++.+...
T Consensus 209 l~eFRRG~~~~~IySL~Fs~ds~~L~~sS~Te------TVHiFKL~~~ 250 (391)
T KOG2110|consen 209 LYEFRRGTYPVSIYSLSFSPDSQFLAASSNTE------TVHIFKLEKV 250 (391)
T ss_pred eeeeeCCceeeEEEEEEECCCCCeEEEecCCC------eEEEEEeccc
Confidence 33 7899999999999999999866 9999987643
No 98
>KOG0313|consensus
Probab=99.47 E-value=1.1e-12 Score=92.82 Aligned_cols=104 Identities=14% Similarity=0.275 Sum_probs=88.0
Q ss_pred eCCCCccEEEEEecCCeEEEEeCCCC-----------------------CCCceEEecCCCCCEEEEEEccCCCEEEEEe
Q psy7062 20 DSKHLVEMVAALGGYQHIRMYDFGSN-----------------------NPNPVINCEGVSKNVVEVGFQEDGKWMFTGG 76 (148)
Q Consensus 20 ~~~~~~~~l~~~~~d~~v~~~d~~~~-----------------------~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~ 76 (148)
+...++..+++|+.|.++++|+...- ...++.++.+|+..|.++.|++ ...+++++
T Consensus 200 sv~~sgtr~~SgS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~GHt~~Vs~V~w~d-~~v~yS~S 278 (423)
T KOG0313|consen 200 SVDSSGTRFCSGSWDTMLKIWSVETDEEDELESSSNRRRKKQKREKEGGTRTPLVTLEGHTEPVSSVVWSD-ATVIYSVS 278 (423)
T ss_pred EecCCCCeEEeecccceeeecccCCCccccccccchhhhhhhhhhhcccccCceEEecccccceeeEEEcC-CCceEeec
Confidence 33444999999999999999993210 0135677889999999999998 77899999
Q ss_pred CCCcEEEEECCcc-----cc--ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062 77 EDCRARIWDLSLC-----FI--QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA 130 (148)
Q Consensus 77 ~~~~i~l~d~~~~-----~~--~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~ 130 (148)
+|++|+.||+.++ +. ..+.++.++|..++|++|+.|. .+++||.+++.
T Consensus 279 wDHTIk~WDletg~~~~~~~~~ksl~~i~~~~~~~Ll~~gssdr------~irl~DPR~~~ 333 (423)
T KOG0313|consen 279 WDHTIKVWDLETGGLKSTLTTNKSLNCISYSPLSKLLASGSSDR------HIRLWDPRTGD 333 (423)
T ss_pred ccceEEEEEeecccceeeeecCcceeEeecccccceeeecCCCC------ceeecCCCCCC
Confidence 9999999999988 22 7799999999999999999988 99999999875
No 99
>KOG1007|consensus
Probab=99.47 E-value=5.4e-13 Score=91.80 Aligned_cols=104 Identities=23% Similarity=0.319 Sum_probs=86.9
Q ss_pred EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEe-cCCCCCEEEEEEccCCC-EEEEEeCCCcEEEEECCcc---
Q psy7062 15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINC-EGVSKNVVEVGFQEDGK-WMFTGGEDCRARIWDLSLC--- 89 (148)
Q Consensus 15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~-~~~~~~i~~~~~sp~~~-~l~~~~~~~~i~l~d~~~~--- 89 (148)
..-+|+|.+++..+++ ..|+++..||+++. .....+ .+|...+..++|+|+.. ++++|+.|+.+++||.++.
T Consensus 174 tsg~WspHHdgnqv~t-t~d~tl~~~D~RT~--~~~~sI~dAHgq~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~tk~p 250 (370)
T KOG1007|consen 174 TSGAWSPHHDGNQVAT-TSDSTLQFWDLRTM--KKNNSIEDAHGQRVRDLDFNPNKQHILVTCGDDGYVRIWDTRKTKFP 250 (370)
T ss_pred cccccCCCCccceEEE-eCCCcEEEEEccch--hhhcchhhhhcceeeeccCCCCceEEEEEcCCCccEEEEeccCCCcc
Confidence 4567889889999999 78999999999987 555554 46889999999999876 6788999999999999987
Q ss_pred ---cc---ccceEEEEcc-CCCEEEEEecCCceecCeeEEEeecC
Q psy7062 90 ---FI---QQVNALRITP-DKQLLASAEELSCCYCGAAVFVYNSC 127 (148)
Q Consensus 90 ---~~---~~i~~~~~sp-~~~~l~~~~~d~~~~~~~~i~~~d~~ 127 (148)
+. .+++++.|+| ..+++++++.|. .|.+|...
T Consensus 251 v~el~~HsHWvW~VRfn~~hdqLiLs~~SDs------~V~Lsca~ 289 (370)
T KOG1007|consen 251 VQELPGHSHWVWAVRFNPEHDQLILSGGSDS------AVNLSCAS 289 (370)
T ss_pred ccccCCCceEEEEEEecCccceEEEecCCCc------eeEEEecc
Confidence 22 8999999999 567888888877 78888744
No 100
>KOG0300|consensus
Probab=99.47 E-value=4.1e-13 Score=93.64 Aligned_cols=114 Identities=14% Similarity=0.196 Sum_probs=95.1
Q ss_pred eeecCcEEE--EEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEEC
Q psy7062 9 LTAFGQIST--VFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDL 86 (148)
Q Consensus 9 ~~~~~~~~~--~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~ 86 (148)
+++.+|..+ +.+.-..++.+++++-|.+..+||++++ +.+..+.+|....+.++-+|..+++++.+.|-+.++||+
T Consensus 266 ~~ltgH~~vV~a~dWL~gg~Q~vTaSWDRTAnlwDVEtg--e~v~~LtGHd~ELtHcstHptQrLVvTsSrDtTFRLWDF 343 (481)
T KOG0300|consen 266 MRLTGHRAVVSACDWLAGGQQMVTASWDRTANLWDVETG--EVVNILTGHDSELTHCSTHPTQRLVVTSSRDTTFRLWDF 343 (481)
T ss_pred eeeeccccceEehhhhcCcceeeeeeccccceeeeeccC--ceeccccCcchhccccccCCcceEEEEeccCceeEeccc
Confidence 344454433 3344445899999999999999999999 999999999999999999999999999999999999999
Q ss_pred Ccc------cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcc
Q psy7062 87 SLC------FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAA 131 (148)
Q Consensus 87 ~~~------~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~ 131 (148)
+.. |+ ..+.++.|.-+.+ +++++.|. +|++||+++...
T Consensus 344 ReaI~sV~VFQGHtdtVTS~vF~~dd~-vVSgSDDr------TvKvWdLrNMRs 390 (481)
T KOG0300|consen 344 REAIQSVAVFQGHTDTVTSVVFNTDDR-VVSGSDDR------TVKVWDLRNMRS 390 (481)
T ss_pred hhhcceeeeecccccceeEEEEecCCc-eeecCCCc------eEEEeeeccccC
Confidence 865 55 6788888877665 68999988 999999987653
No 101
>KOG0268|consensus
Probab=99.47 E-value=1.3e-13 Score=97.10 Aligned_cols=105 Identities=16% Similarity=0.259 Sum_probs=94.3
Q ss_pred cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----
Q psy7062 14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC---- 89 (148)
Q Consensus 14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~---- 89 (148)
.+.++|+|. +..+++|++|..+-.||++.. ..++....+|.+.|..++|||-|+-+++|+.|.+|++|..+.+
T Consensus 232 TN~IswnPe--afnF~~a~ED~nlY~~DmR~l-~~p~~v~~dhvsAV~dVdfsptG~EfvsgsyDksIRIf~~~~~~SRd 308 (433)
T KOG0268|consen 232 TNTICWNPE--AFNFVAANEDHNLYTYDMRNL-SRPLNVHKDHVSAVMDVDFSPTGQEFVSGSYDKSIRIFPVNHGHSRD 308 (433)
T ss_pred ccceecCcc--ccceeeccccccceehhhhhh-cccchhhcccceeEEEeccCCCcchhccccccceEEEeecCCCcchh
Confidence 467889994 788899899999999999876 3678888899999999999999999999999999999999877
Q ss_pred -c-c---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecC
Q psy7062 90 -F-I---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSC 127 (148)
Q Consensus 90 -~-~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~ 127 (148)
+ . +.+.|+.||-|.+++++|+.|+ .|++|.-.
T Consensus 309 iYhtkRMq~V~~Vk~S~Dskyi~SGSdd~------nvRlWka~ 345 (433)
T KOG0268|consen 309 IYHTKRMQHVFCVKYSMDSKYIISGSDDG------NVRLWKAK 345 (433)
T ss_pred hhhHhhhheeeEEEEeccccEEEecCCCc------ceeeeecc
Confidence 2 2 8899999999999999999988 89999854
No 102
>KOG0278|consensus
Probab=99.47 E-value=2.1e-13 Score=92.17 Aligned_cols=109 Identities=17% Similarity=0.303 Sum_probs=92.6
Q ss_pred EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----
Q psy7062 15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC----- 89 (148)
Q Consensus 15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~----- 89 (148)
..++|+.+ .++|++|+.+.-+|+||++... .+...+.+|+..|..+-|+...+.+++...|+++|+||.+++
T Consensus 104 k~~af~~d--s~~lltgg~ekllrvfdln~p~-App~E~~ghtg~Ir~v~wc~eD~~iLSSadd~tVRLWD~rTgt~v~s 180 (334)
T KOG0278|consen 104 KAVAFSQD--SNYLLTGGQEKLLRVFDLNRPK-APPKEISGHTGGIRTVLWCHEDKCILSSADDKTVRLWDHRTGTEVQS 180 (334)
T ss_pred eeEEeccc--chhhhccchHHHhhhhhccCCC-CCchhhcCCCCcceeEEEeccCceEEeeccCCceEEEEeccCcEEEE
Confidence 56777777 7899999999999999998762 566788899999999999999999999999999999999998
Q ss_pred cc--ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCccee
Q psy7062 90 FI--QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVV 133 (148)
Q Consensus 90 ~~--~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~ 133 (148)
+. .++.++.++++|++|..+-. ..|.+||..+.....
T Consensus 181 L~~~s~VtSlEvs~dG~ilTia~g-------ssV~Fwdaksf~~lK 219 (334)
T KOG0278|consen 181 LEFNSPVTSLEVSQDGRILTIAYG-------SSVKFWDAKSFGLLK 219 (334)
T ss_pred EecCCCCcceeeccCCCEEEEecC-------ceeEEecccccccee
Confidence 32 99999999999998877642 269999977655443
No 103
>KOG4378|consensus
Probab=99.46 E-value=7.4e-13 Score=96.83 Aligned_cols=123 Identities=14% Similarity=0.216 Sum_probs=101.6
Q ss_pred EEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceE-EecCCCCCEEEEEEccC-CCEEEEEeCCCcEEEEECCcc----
Q psy7062 16 STVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVI-NCEGVSKNVVEVGFQED-GKWMFTGGEDCRARIWDLSLC---- 89 (148)
Q Consensus 16 ~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~-~~~~~~~~i~~~~~sp~-~~~l~~~~~~~~i~l~d~~~~---- 89 (148)
-+.|++.. ..+|.+++++|.|.+||+... .++. ..+.|.....+++|||. ...+++.+.|..|.+||+++.
T Consensus 169 ll~ys~sk-r~lL~~asd~G~VtlwDv~g~--sp~~~~~~~HsAP~~gicfspsne~l~vsVG~Dkki~~yD~~s~~s~~ 245 (673)
T KOG4378|consen 169 LLRYSPSK-RFLLSIASDKGAVTLWDVQGM--SPIFHASEAHSAPCRGICFSPSNEALLVSVGYDKKINIYDIRSQASTD 245 (673)
T ss_pred Eeeccccc-ceeeEeeccCCeEEEEeccCC--CcccchhhhccCCcCcceecCCccceEEEecccceEEEeecccccccc
Confidence 46677653 678888899999999999987 5554 44569999999999994 567899999999999999887
Q ss_pred -cc--ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceeccCcccCcceeecc
Q psy7062 90 -FI--QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVASNTLVKPQVTRAK 147 (148)
Q Consensus 90 -~~--~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~ 147 (148)
+. .+...++|+++|.+|+.|+..| .|..||++....+......+.-.++|+.
T Consensus 246 ~l~y~~Plstvaf~~~G~~L~aG~s~G------~~i~YD~R~~k~Pv~v~sah~~sVt~va 300 (673)
T KOG4378|consen 246 RLTYSHPLSTVAFSECGTYLCAGNSKG------ELIAYDMRSTKAPVAVRSAHDASVTRVA 300 (673)
T ss_pred eeeecCCcceeeecCCceEEEeecCCc------eEEEEecccCCCCceEeeecccceeEEE
Confidence 33 8999999999999999999877 9999999988877776666666666653
No 104
>KOG0308|consensus
Probab=99.46 E-value=1.3e-12 Score=97.80 Aligned_cols=108 Identities=19% Similarity=0.320 Sum_probs=94.1
Q ss_pred EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----
Q psy7062 15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC----- 89 (148)
Q Consensus 15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~----- 89 (148)
...+++-+..+.++++|+.++.+++||.++. +.+..+.+|+..|..+-.++||..+++++.||+|++||+...
T Consensus 173 siYSLA~N~t~t~ivsGgtek~lr~wDprt~--~kimkLrGHTdNVr~ll~~dDGt~~ls~sSDgtIrlWdLgqQrCl~T 250 (735)
T KOG0308|consen 173 SIYSLAMNQTGTIIVSGGTEKDLRLWDPRTC--KKIMKLRGHTDNVRVLLVNDDGTRLLSASSDGTIRLWDLGQQRCLAT 250 (735)
T ss_pred ceeeeecCCcceEEEecCcccceEEeccccc--cceeeeeccccceEEEEEcCCCCeEeecCCCceEEeeeccccceeee
Confidence 3445555555889999999999999999998 888889999999999999999999999999999999999876
Q ss_pred cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062 90 FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA 130 (148)
Q Consensus 90 ~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~ 130 (148)
+. ..+|++..+|+-.++.+|++|+ .|..-|++++.
T Consensus 251 ~~vH~e~VWaL~~~~sf~~vYsG~rd~------~i~~Tdl~n~~ 288 (735)
T KOG0308|consen 251 YIVHKEGVWALQSSPSFTHVYSGGRDG------NIYRTDLRNPA 288 (735)
T ss_pred EEeccCceEEEeeCCCcceEEecCCCC------cEEecccCCch
Confidence 22 6699999999999999999988 77777777653
No 105
>KOG0294|consensus
Probab=99.46 E-value=1.6e-12 Score=90.32 Aligned_cols=105 Identities=14% Similarity=0.190 Sum_probs=88.9
Q ss_pred cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----
Q psy7062 14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC---- 89 (148)
Q Consensus 14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~---- 89 (148)
..++.|.++.+...|.+|++||.|.+|+.... ..+.++++|...|+.++.+|.++..++.+.|+.+++||+-.+
T Consensus 86 itaL~F~~~~S~shLlS~sdDG~i~iw~~~~W--~~~~slK~H~~~Vt~lsiHPS~KLALsVg~D~~lr~WNLV~Gr~a~ 163 (362)
T KOG0294|consen 86 ITALKFYPPLSKSHLLSGSDDGHIIIWRVGSW--ELLKSLKAHKGQVTDLSIHPSGKLALSVGGDQVLRTWNLVRGRVAF 163 (362)
T ss_pred eEEEEecCCcchhheeeecCCCcEEEEEcCCe--EEeeeecccccccceeEecCCCceEEEEcCCceeeeehhhcCccce
Confidence 57888887766667888899999999999988 899999999999999999999999999999999999999776
Q ss_pred ---ccccceEEEEccCCCEEEEEecCCceecCeeEEEeecC
Q psy7062 90 ---FIQQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSC 127 (148)
Q Consensus 90 ---~~~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~ 127 (148)
+......+.|+|.|.+++.+..++ |-+|.+.
T Consensus 164 v~~L~~~at~v~w~~~Gd~F~v~~~~~-------i~i~q~d 197 (362)
T KOG0294|consen 164 VLNLKNKATLVSWSPQGDHFVVSGRNK-------IDIYQLD 197 (362)
T ss_pred eeccCCcceeeEEcCCCCEEEEEeccE-------EEEEecc
Confidence 225566689999998877777644 6666544
No 106
>KOG0771|consensus
Probab=99.45 E-value=1e-12 Score=93.76 Aligned_cols=121 Identities=21% Similarity=0.312 Sum_probs=100.2
Q ss_pred cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----
Q psy7062 14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC---- 89 (148)
Q Consensus 14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~---- 89 (148)
..+++|.++ |..+++++.||++|+|+..+. ..+.....|...|.++.|+|||+.+++-+.| ..++|+.+++
T Consensus 147 ~k~vaf~~~--gs~latgg~dg~lRv~~~Ps~--~t~l~e~~~~~eV~DL~FS~dgk~lasig~d-~~~VW~~~~g~~~a 221 (398)
T KOG0771|consen 147 QKVVAFNGD--GSKLATGGTDGTLRVWEWPSM--LTILEEIAHHAEVKDLDFSPDGKFLASIGAD-SARVWSVNTGAALA 221 (398)
T ss_pred ceEEEEcCC--CCEeeeccccceEEEEecCcc--hhhhhhHhhcCccccceeCCCCcEEEEecCC-ceEEEEeccCchhh
Confidence 467777777 899999999999999998877 6777777899999999999999999999988 8999998765
Q ss_pred ---------------c-----------------------------------c--------ccceEEEEccCCCEEEEEec
Q psy7062 90 ---------------F-----------------------------------I--------QQVNALRITPDKQLLASAEE 111 (148)
Q Consensus 90 ---------------~-----------------------------------~--------~~i~~~~~sp~~~~l~~~~~ 111 (148)
| + ..|.+++.+++|++++.|+.
T Consensus 222 ~~t~~~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~~~~~~~~siSsl~VS~dGkf~AlGT~ 301 (398)
T KOG0771|consen 222 RKTPFSKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFLRLRKKIKRFKSISSLAVSDDGKFLALGTM 301 (398)
T ss_pred hcCCcccchhhhhceecccCCCceEEEEEecCCCCceeEEEeeeeccccccchhhhhhccCcceeEEEcCCCcEEEEecc
Confidence 0 0 25778899999999999999
Q ss_pred CCceecCeeEEEeecCCCcceeccCcccCcceee
Q psy7062 112 LSCCYCGAAVFVYNSCYPAAVVASNTLVKPQVTR 145 (148)
Q Consensus 112 d~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~ 145 (148)
|| .|.+++....+..+...+.+.-.+|.
T Consensus 302 dG------sVai~~~~~lq~~~~vk~aH~~~VT~ 329 (398)
T KOG0771|consen 302 DG------SVAIYDAKSLQRLQYVKEAHLGFVTG 329 (398)
T ss_pred CC------cEEEEEeceeeeeEeehhhheeeeee
Confidence 88 89999988777766665555544443
No 107
>KOG1188|consensus
Probab=99.45 E-value=1.3e-12 Score=91.51 Aligned_cols=119 Identities=18% Similarity=0.249 Sum_probs=97.3
Q ss_pred cEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEcc--CCCEEEEEeCCCcEEEEECCcc-------cc----c
Q psy7062 26 EMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQE--DGKWMFTGGEDCRARIWDLSLC-------FI----Q 92 (148)
Q Consensus 26 ~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp--~~~~l~~~~~~~~i~l~d~~~~-------~~----~ 92 (148)
..+|++...++|++||..++ +.+..+++++..+..+.|.. .+..+.+++.||+|++||+++. +. .
T Consensus 41 ~~vav~lSngsv~lyd~~tg--~~l~~fk~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~~~~~~~~ 118 (376)
T KOG1188|consen 41 TAVAVSLSNGSVRLYDKGTG--QLLEEFKGPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESARISWTQQSGT 118 (376)
T ss_pred eeEEEEecCCeEEEEeccch--hhhheecCCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhhhheeccCCCCC
Confidence 44677788999999999998 88999999999999999877 5678999999999999999987 22 3
Q ss_pred cceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcc-eeccCcccCcceeeccC
Q psy7062 93 QVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAA-VVASNTLVKPQVTRAKE 148 (148)
Q Consensus 93 ~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~-~~~~~~~~~~~~~~~~~ 148 (148)
+..+++....++.+++|.. .......|.+||+|..+. ...+.+-+.-++|+.+|
T Consensus 119 ~f~~ld~nck~~ii~~GtE--~~~s~A~v~lwDvR~~qq~l~~~~eSH~DDVT~lrF 173 (376)
T KOG1188|consen 119 PFICLDLNCKKNIIACGTE--LTRSDASVVLWDVRSEQQLLRQLNESHNDDVTQLRF 173 (376)
T ss_pred cceEeeccCcCCeEEeccc--cccCceEEEEEEeccccchhhhhhhhccCcceeEEe
Confidence 5566666667788888765 445667899999998876 78888888888887764
No 108
>KOG0641|consensus
Probab=99.44 E-value=3.9e-12 Score=85.20 Aligned_cols=105 Identities=19% Similarity=0.296 Sum_probs=89.4
Q ss_pred CcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecC-------CCCCEEEEEEccCCCEEEEEeCCCcEEEEE
Q psy7062 13 GQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEG-------VSKNVVEVGFQEDGKWMFTGGEDCRARIWD 85 (148)
Q Consensus 13 ~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~-------~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d 85 (148)
++.-..|+.+ +-++++|+.|.+|+.||++.. ..+.++.. ..+.|..+++.|.|+.+++|-.|....+||
T Consensus 184 ghilalyswn--~~m~~sgsqdktirfwdlrv~--~~v~~l~~~~~~~glessavaav~vdpsgrll~sg~~dssc~lyd 259 (350)
T KOG0641|consen 184 GHILALYSWN--GAMFASGSQDKTIRFWDLRVN--SCVNTLDNDFHDGGLESSAVAAVAVDPSGRLLASGHADSSCMLYD 259 (350)
T ss_pred ccEEEEEEec--CcEEEccCCCceEEEEeeecc--ceeeeccCcccCCCcccceeEEEEECCCcceeeeccCCCceEEEE
Confidence 3444555666 899999999999999999987 67776643 236799999999999999999999999999
Q ss_pred CCcc-----cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecC
Q psy7062 86 LSLC-----FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSC 127 (148)
Q Consensus 86 ~~~~-----~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~ 127 (148)
++.+ |. ..|+++.|+|...++++++-|- +|++-|+.
T Consensus 260 irg~r~iq~f~phsadir~vrfsp~a~yllt~syd~------~ikltdlq 303 (350)
T KOG0641|consen 260 IRGGRMIQRFHPHSADIRCVRFSPGAHYLLTCSYDM------KIKLTDLQ 303 (350)
T ss_pred eeCCceeeeeCCCccceeEEEeCCCceEEEEecccc------eEEEeecc
Confidence 9987 32 8899999999999999999877 89999977
No 109
>KOG0308|consensus
Probab=99.44 E-value=1.9e-12 Score=97.06 Aligned_cols=112 Identities=19% Similarity=0.342 Sum_probs=92.5
Q ss_pred EEEEE-eCCCCccEEEEEecCCeEEEEeCCCCCCCc--------eEEec-CCCCCEEEEEEccCCCEEEEEeCCCcEEEE
Q psy7062 15 ISTVF-DSKHLVEMVAALGGYQHIRMYDFGSNNPNP--------VINCE-GVSKNVVEVGFQEDGKWMFTGGEDCRARIW 84 (148)
Q Consensus 15 ~~~~~-~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~--------~~~~~-~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~ 84 (148)
.++++ ..+ ..++|+|+-|+.|.+||++++.... ...+. ++...|++++-++.|..+++|+.++.+++|
T Consensus 121 kcla~~ak~--~~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~siYSLA~N~t~t~ivsGgtek~lr~w 198 (735)
T KOG0308|consen 121 KCLAYIAKN--NELVASGGLDRKIFLWDINTGTATLVASFNNVTVNSLGSGPKDSIYSLAMNQTGTIIVSGGTEKDLRLW 198 (735)
T ss_pred eeeeecccC--ceeEEecCCCccEEEEEccCcchhhhhhccccccccCCCCCccceeeeecCCcceEEEecCcccceEEe
Confidence 56666 444 8999999999999999999762111 11222 677889999999999999999999999999
Q ss_pred ECCcc-----cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceec
Q psy7062 85 DLSLC-----FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVA 134 (148)
Q Consensus 85 d~~~~-----~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~ 134 (148)
|.++. +. ..+..+..++||..+++++.|| +|++||+.......+
T Consensus 199 Dprt~~kimkLrGHTdNVr~ll~~dDGt~~ls~sSDg------tIrlWdLgqQrCl~T 250 (735)
T KOG0308|consen 199 DPRTCKKIMKLRGHTDNVRVLLVNDDGTRLLSASSDG------TIRLWDLGQQRCLAT 250 (735)
T ss_pred ccccccceeeeeccccceEEEEEcCCCCeEeecCCCc------eEEeeeccccceeee
Confidence 99987 43 8899999999999999999999 999999986655443
No 110
>KOG0306|consensus
Probab=99.43 E-value=1.3e-12 Score=99.31 Aligned_cols=106 Identities=13% Similarity=0.231 Sum_probs=94.3
Q ss_pred EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----
Q psy7062 15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC----- 89 (148)
Q Consensus 15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~----- 89 (148)
+..+.|.+.++.++++||.|..|++|-++-+ .+-..+.+|...|.++.|.|+...+.+++.|+.++-||-...
T Consensus 552 PV~smDIS~DSklivTgSADKnVKiWGLdFG--DCHKS~fAHdDSvm~V~F~P~~~~FFt~gKD~kvKqWDg~kFe~iq~ 629 (888)
T KOG0306|consen 552 PVLSMDISPDSKLIVTGSADKNVKIWGLDFG--DCHKSFFAHDDSVMSVQFLPKTHLFFTCGKDGKVKQWDGEKFEEIQK 629 (888)
T ss_pred ceeEEeccCCcCeEEeccCCCceEEeccccc--hhhhhhhcccCceeEEEEcccceeEEEecCcceEEeechhhhhhhee
Confidence 4555555555999999999999999999988 888999999999999999999999999999999999999887
Q ss_pred cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCC
Q psy7062 90 FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCY 128 (148)
Q Consensus 90 ~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~ 128 (148)
+. ..++|++.+|+|.++++++.|. .|++|.-..
T Consensus 630 L~~H~~ev~cLav~~~G~~vvs~shD~------sIRlwE~td 665 (888)
T KOG0306|consen 630 LDGHHSEVWCLAVSPNGSFVVSSSHDK------SIRLWERTD 665 (888)
T ss_pred eccchheeeeeEEcCCCCeEEeccCCc------eeEeeeccC
Confidence 22 8899999999999999999988 899997543
No 111
>KOG1445|consensus
Probab=99.43 E-value=4.3e-13 Score=100.68 Aligned_cols=119 Identities=15% Similarity=0.171 Sum_probs=95.8
Q ss_pred cceeeecC--cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEE
Q psy7062 6 GGILTAFG--QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARI 83 (148)
Q Consensus 6 ~~~~~~~~--~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l 83 (148)
.+++++++ ...+.|+|- ..++|++++.|.+|++||+.+. .....+.+|+..|.+++|||+|+.+++.++||++++
T Consensus 670 e~~lt~h~eKI~slRfHPL-AadvLa~asyd~Ti~lWDl~~~--~~~~~l~gHtdqIf~~AWSpdGr~~AtVcKDg~~rV 746 (1012)
T KOG1445|consen 670 EKILTIHGEKITSLRFHPL-AADVLAVASYDSTIELWDLANA--KLYSRLVGHTDQIFGIAWSPDGRRIATVCKDGTLRV 746 (1012)
T ss_pred ceeeecccceEEEEEecch-hhhHhhhhhccceeeeeehhhh--hhhheeccCcCceeEEEECCCCcceeeeecCceEEE
Confidence 34566665 345666764 3788899999999999999998 777788999999999999999999999999999999
Q ss_pred EECCcc---c-c------ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCC
Q psy7062 84 WDLSLC---F-I------QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYP 129 (148)
Q Consensus 84 ~d~~~~---~-~------~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~ 129 (148)
|.-+++ + + .+-..+.|..+|+++++.+.|..- ..+|.+||..+.
T Consensus 747 y~Prs~e~pv~Eg~gpvgtRgARi~wacdgr~viv~Gfdk~S--eRQv~~Y~Aq~l 800 (1012)
T KOG1445|consen 747 YEPRSREQPVYEGKGPVGTRGARILWACDGRIVIVVGFDKSS--ERQVQMYDAQTL 800 (1012)
T ss_pred eCCCCCCCccccCCCCccCcceeEEEEecCcEEEEecccccc--hhhhhhhhhhhc
Confidence 999887 2 2 556678899999999998877632 235777775543
No 112
>KOG0292|consensus
Probab=99.42 E-value=1.3e-12 Score=101.02 Aligned_cols=111 Identities=14% Similarity=0.243 Sum_probs=98.1
Q ss_pred cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc---c
Q psy7062 14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC---F 90 (148)
Q Consensus 14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~---~ 90 (148)
...++|+|. ..-+.++-..|.|.+||.+=+ ..+..|..|.+.|.+++|+|.+-.+++|+.|.+|++|+.+.. |
T Consensus 12 vKglsFHP~--rPwILtslHsG~IQlWDYRM~--tli~rFdeHdGpVRgv~FH~~qplFVSGGDDykIkVWnYk~rrclf 87 (1202)
T KOG0292|consen 12 VKGLSFHPK--RPWILTSLHSGVIQLWDYRMG--TLIDRFDEHDGPVRGVDFHPTQPLFVSGGDDYKIKVWNYKTRRCLF 87 (1202)
T ss_pred ccceecCCC--CCEEEEeecCceeeeehhhhh--hHHhhhhccCCccceeeecCCCCeEEecCCccEEEEEecccceehh
Confidence 356889987 556666578899999999977 888999999999999999999999999999999999999887 3
Q ss_pred c-----ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceec
Q psy7062 91 I-----QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVA 134 (148)
Q Consensus 91 ~-----~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~ 134 (148)
. ..|+.+.||+...+++++|+|. +|++|+..+.+.+..
T Consensus 88 tL~GHlDYVRt~~FHheyPWIlSASDDQ------TIrIWNwqsr~~iav 130 (1202)
T KOG0292|consen 88 TLLGHLDYVRTVFFHHEYPWILSASDDQ------TIRIWNWQSRKCIAV 130 (1202)
T ss_pred hhccccceeEEeeccCCCceEEEccCCC------eEEEEeccCCceEEE
Confidence 3 8899999999999999999988 999999988776543
No 113
>KOG0302|consensus
Probab=99.42 E-value=9e-13 Score=93.36 Aligned_cols=125 Identities=15% Similarity=0.142 Sum_probs=92.3
Q ss_pred EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCc-eEEecCCCCCEEEEEEccCC-CEEEEEeCCCcEEEEECCcc---
Q psy7062 15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNP-VINCEGVSKNVVEVGFQEDG-KWMFTGGEDCRARIWDLSLC--- 89 (148)
Q Consensus 15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~-~~~~~~~~~~i~~~~~sp~~-~~l~~~~~~~~i~l~d~~~~--- 89 (148)
.+++|+|...| .|++|.--+.|++|...++.... ...+.+|+..|..++|||.. ..+++|+.|+.|++||+++.
T Consensus 215 y~LdWSp~~~g-~LlsGDc~~~I~lw~~~~g~W~vd~~Pf~gH~~SVEDLqWSptE~~vfaScS~DgsIrIWDiRs~~~~ 293 (440)
T KOG0302|consen 215 YGLDWSPIKTG-RLLSGDCVKGIHLWEPSTGSWKVDQRPFTGHTKSVEDLQWSPTEDGVFASCSCDGSIRIWDIRSGPKK 293 (440)
T ss_pred eeeeccccccc-ccccCccccceEeeeeccCceeecCccccccccchhhhccCCccCceEEeeecCceEEEEEecCCCcc
Confidence 46666775433 35665666789999998863221 24566799999999999955 58899999999999999987
Q ss_pred ---cc----ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcc--eeccCcccCcceeec
Q psy7062 90 ---FI----QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAA--VVASNTLVKPQVTRA 146 (148)
Q Consensus 90 ---~~----~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~--~~~~~~~~~~~~~~~ 146 (148)
+. +.++.+.|+.+..+|++|+.|| ++.+||++.-+. ++..-..++..++.+
T Consensus 294 ~~~~~kAh~sDVNVISWnr~~~lLasG~DdG------t~~iwDLR~~~~~~pVA~fk~Hk~pItsi 353 (440)
T KOG0302|consen 294 AAVSTKAHNSDVNVISWNRREPLLASGGDDG------TLSIWDLRQFKSGQPVATFKYHKAPITSI 353 (440)
T ss_pred ceeEeeccCCceeeEEccCCcceeeecCCCc------eEEEEEhhhccCCCcceeEEeccCCeeEE
Confidence 21 7799999999888999999988 999999996542 333333444444443
No 114
>KOG0303|consensus
Probab=99.41 E-value=1.8e-12 Score=92.38 Aligned_cols=114 Identities=11% Similarity=0.158 Sum_probs=90.7
Q ss_pred EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc--cc-
Q psy7062 15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC--FI- 91 (148)
Q Consensus 15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~--~~- 91 (148)
..++|+|.- .+.|++++.|.+|.+||+.++ +.+.++. |...|++++|+.||..+++.+.|..|++||.+.+ ..
T Consensus 135 g~V~wHPtA-~NVLlsag~Dn~v~iWnv~tg--eali~l~-hpd~i~S~sfn~dGs~l~TtckDKkvRv~dpr~~~~v~e 210 (472)
T KOG0303|consen 135 GLVQWHPTA-PNVLLSAGSDNTVSIWNVGTG--EALITLD-HPDMVYSMSFNRDGSLLCTTCKDKKVRVIDPRRGTVVSE 210 (472)
T ss_pred EEEeecccc-hhhHhhccCCceEEEEeccCC--ceeeecC-CCCeEEEEEeccCCceeeeecccceeEEEcCCCCcEeee
Confidence 467788764 677888899999999999999 8888877 9999999999999999999999999999999998 11
Q ss_pred ------ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceecc
Q psy7062 92 ------QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVAS 135 (148)
Q Consensus 92 ------~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~ 135 (148)
.+...+.|-.++. +++.+.. ..+..++.+||..+.+.+...
T Consensus 211 ~~~heG~k~~Raifl~~g~-i~tTGfs--r~seRq~aLwdp~nl~eP~~~ 257 (472)
T KOG0303|consen 211 GVAHEGAKPARAIFLASGK-IFTTGFS--RMSERQIALWDPNNLEEPIAL 257 (472)
T ss_pred cccccCCCcceeEEeccCc-eeeeccc--cccccceeccCcccccCccee
Confidence 5556677777888 4554442 234457999998877655433
No 115
>KOG0267|consensus
Probab=99.41 E-value=5.5e-13 Score=100.86 Aligned_cols=109 Identities=23% Similarity=0.364 Sum_probs=96.7
Q ss_pred EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----
Q psy7062 15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC----- 89 (148)
Q Consensus 15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~----- 89 (148)
..+.|+|- +.+.++|+.|..+++||.+-. .+...+.+|...+..+.|+|+|+++++++.|.++++||+..+
T Consensus 116 ~sv~f~P~--~~~~a~gStdtd~~iwD~Rk~--Gc~~~~~s~~~vv~~l~lsP~Gr~v~~g~ed~tvki~d~~agk~~~e 191 (825)
T KOG0267|consen 116 TSVDFHPY--GEFFASGSTDTDLKIWDIRKK--GCSHTYKSHTRVVDVLRLSPDGRWVASGGEDNTVKIWDLTAGKLSKE 191 (825)
T ss_pred ceeeeccc--eEEeccccccccceehhhhcc--CceeeecCCcceeEEEeecCCCceeeccCCcceeeeecccccccccc
Confidence 45556776 999999999999999999966 688999999999999999999999999999999999999877
Q ss_pred cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCccee
Q psy7062 90 FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVV 133 (148)
Q Consensus 90 ~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~ 133 (148)
|. .++..+.|+|..-.++.|+.|+ +++|||+++-..+.
T Consensus 192 f~~~e~~v~sle~hp~e~Lla~Gs~d~------tv~f~dletfe~I~ 232 (825)
T KOG0267|consen 192 FKSHEGKVQSLEFHPLEVLLAPGSSDR------TVRFWDLETFEVIS 232 (825)
T ss_pred cccccccccccccCchhhhhccCCCCc------eeeeeccceeEEee
Confidence 44 8899999999999999999988 99999998655443
No 116
>KOG0641|consensus
Probab=99.41 E-value=1.2e-11 Score=82.98 Aligned_cols=104 Identities=13% Similarity=0.142 Sum_probs=91.4
Q ss_pred cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----
Q psy7062 14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC---- 89 (148)
Q Consensus 14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~---- 89 (148)
..+++.||. |++|++|-.|.++.+||++.+ +++..+..|+..|.++.|+|...++++++.|..|++-|++..
T Consensus 234 vaav~vdps--grll~sg~~dssc~lydirg~--r~iq~f~phsadir~vrfsp~a~yllt~syd~~ikltdlqgdla~e 309 (350)
T KOG0641|consen 234 VAAVAVDPS--GRLLASGHADSSCMLYDIRGG--RMIQRFHPHSADIRCVRFSPGAHYLLTCSYDMKIKLTDLQGDLAHE 309 (350)
T ss_pred eEEEEECCC--cceeeeccCCCceEEEEeeCC--ceeeeeCCCccceeEEEeCCCceEEEEecccceEEEeecccchhhc
Confidence 345666777 999999999999999999998 899999999999999999999999999999999999999765
Q ss_pred cc--------ccceEEEEccCCCEEEEEecCCceecCeeEEEeecC
Q psy7062 90 FI--------QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSC 127 (148)
Q Consensus 90 ~~--------~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~ 127 (148)
+. ..+-.+.|+|+.-.+++.+.|. ++.+|-+.
T Consensus 310 l~~~vv~ehkdk~i~~rwh~~d~sfisssadk------t~tlwa~~ 349 (350)
T KOG0641|consen 310 LPIMVVAEHKDKAIQCRWHPQDFSFISSSADK------TATLWALN 349 (350)
T ss_pred CceEEEEeccCceEEEEecCccceeeeccCcc------eEEEeccC
Confidence 21 5667789999988899999988 89999754
No 117
>KOG0278|consensus
Probab=99.40 E-value=7.6e-12 Score=84.80 Aligned_cols=97 Identities=18% Similarity=0.299 Sum_probs=82.1
Q ss_pred ccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----c-c---ccce
Q psy7062 25 VEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-----F-I---QQVN 95 (148)
Q Consensus 25 ~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-----~-~---~~i~ 95 (148)
|+++.. ...++|+.||.++- ..+..+. -+..|.+.+++|+...++.|++|..++.||..++ + . +++.
T Consensus 196 G~ilTi-a~gssV~Fwdaksf--~~lKs~k-~P~nV~SASL~P~k~~fVaGged~~~~kfDy~TgeEi~~~nkgh~gpVh 271 (334)
T KOG0278|consen 196 GRILTI-AYGSSVKFWDAKSF--GLLKSYK-MPCNVESASLHPKKEFFVAGGEDFKVYKFDYNTGEEIGSYNKGHFGPVH 271 (334)
T ss_pred CCEEEE-ecCceeEEeccccc--cceeecc-CccccccccccCCCceEEecCcceEEEEEeccCCceeeecccCCCCceE
Confidence 777666 66678888888876 6666665 5778899999999999999999999999999988 3 2 8999
Q ss_pred EEEEccCCCEEEEEecCCceecCeeEEEeecCCCcc
Q psy7062 96 ALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAA 131 (148)
Q Consensus 96 ~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~ 131 (148)
|+.|+|+|...++|+.|| +|++|.....+.
T Consensus 272 cVrFSPdGE~yAsGSEDG------TirlWQt~~~~~ 301 (334)
T KOG0278|consen 272 CVRFSPDGELYASGSEDG------TIRLWQTTPGKT 301 (334)
T ss_pred EEEECCCCceeeccCCCc------eEEEEEecCCCc
Confidence 999999999999999999 999998764443
No 118
>KOG0306|consensus
Probab=99.40 E-value=8.6e-12 Score=94.94 Aligned_cols=113 Identities=15% Similarity=0.239 Sum_probs=99.2
Q ss_pred cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----
Q psy7062 14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC---- 89 (148)
Q Consensus 14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~---- 89 (148)
.-++.++|+ +.+||++--|.+|++|-+++. +..-.+.+|.-+|.++..|||++.++||+-|..+++|-+.=+
T Consensus 511 vL~v~~Spd--gk~LaVsLLdnTVkVyflDtl--KFflsLYGHkLPV~smDIS~DSklivTgSADKnVKiWGLdFGDCHK 586 (888)
T KOG0306|consen 511 VLCVSVSPD--GKLLAVSLLDNTVKVYFLDTL--KFFLSLYGHKLPVLSMDISPDSKLIVTGSADKNVKIWGLDFGDCHK 586 (888)
T ss_pred EEEEEEcCC--CcEEEEEeccCeEEEEEecce--eeeeeecccccceeEEeccCCcCeEEeccCCCceEEeccccchhhh
Confidence 457777888 999999899999999999998 788889999999999999999999999999999999987655
Q ss_pred --cc--ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceeccC
Q psy7062 90 --FI--QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVASN 136 (148)
Q Consensus 90 --~~--~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~~ 136 (148)
|. ..+.++.|-|....+++++.|+ .|+-||-.....++.+.
T Consensus 587 S~fAHdDSvm~V~F~P~~~~FFt~gKD~------kvKqWDg~kFe~iq~L~ 631 (888)
T KOG0306|consen 587 SFFAHDDSVMSVQFLPKTHLFFTCGKDG------KVKQWDGEKFEEIQKLD 631 (888)
T ss_pred hhhcccCceeEEEEcccceeEEEecCcc------eEEeechhhhhhheeec
Confidence 44 8899999999999999999999 99999976655554443
No 119
>KOG0288|consensus
Probab=99.40 E-value=7.7e-12 Score=89.49 Aligned_cols=102 Identities=15% Similarity=0.178 Sum_probs=84.5
Q ss_pred cEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----------cc--cc
Q psy7062 26 EMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC----------FI--QQ 93 (148)
Q Consensus 26 ~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~----------~~--~~ 93 (148)
..+.+|-.|++|+.||.++. ........+. .|+++..++++.-+++++.|.++.+.|+++. +. ..
T Consensus 313 ~~~~SgH~DkkvRfwD~Rs~--~~~~sv~~gg-~vtSl~ls~~g~~lLsssRDdtl~viDlRt~eI~~~~sA~g~k~asD 389 (459)
T KOG0288|consen 313 SDVISGHFDKKVRFWDIRSA--DKTRSVPLGG-RVTSLDLSMDGLELLSSSRDDTLKVIDLRTKEIRQTFSAEGFKCASD 389 (459)
T ss_pred eeeeecccccceEEEeccCC--ceeeEeecCc-ceeeEeeccCCeEEeeecCCCceeeeecccccEEEEeeccccccccc
Confidence 34556667788999998887 6777776544 8999999999999999999999999999987 22 56
Q ss_pred ceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceeccC
Q psy7062 94 VNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVASN 136 (148)
Q Consensus 94 i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~~ 136 (148)
...+.|||++.++++|+.|| .|++|++.+.+......
T Consensus 390 wtrvvfSpd~~YvaAGS~dg------sv~iW~v~tgKlE~~l~ 426 (459)
T KOG0288|consen 390 WTRVVFSPDGSYVAAGSADG------SVYIWSVFTGKLEKVLS 426 (459)
T ss_pred cceeEECCCCceeeeccCCC------cEEEEEccCceEEEEec
Confidence 78899999999999999999 99999998776544433
No 120
>KOG4283|consensus
Probab=99.40 E-value=4.8e-12 Score=87.51 Aligned_cols=109 Identities=15% Similarity=0.189 Sum_probs=84.8
Q ss_pred cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCC----------Cce---EEecCCCCCEEEEEEcc-CCCEEEEEeCCC
Q psy7062 14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNP----------NPV---INCEGVSKNVVEVGFQE-DGKWMFTGGEDC 79 (148)
Q Consensus 14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~----------~~~---~~~~~~~~~i~~~~~sp-~~~~l~~~~~~~ 79 (148)
.+.+..++.. |+++++|+.|+.+.+||++.... ..+ ....+|.-.|..+.|-| |.-++.+++.|.
T Consensus 46 vNsL~id~te-grymlSGgadgsi~v~Dl~n~t~~e~s~li~k~~c~v~~~h~~~Hky~iss~~WyP~DtGmFtssSFDh 124 (397)
T KOG4283|consen 46 VNSLQIDLTE-GRYMLSGGADGSIAVFDLQNATDYEASGLIAKHKCIVAKQHENGHKYAISSAIWYPIDTGMFTSSSFDH 124 (397)
T ss_pred cceeeecccc-ceEEeecCCCccEEEEEeccccchhhccceeheeeeccccCCccceeeeeeeEEeeecCceeecccccc
Confidence 4566667654 99999999999999999986520 000 11234777899999999 667888899999
Q ss_pred cEEEEECCcc-------------------------------------------------cc---ccceEEEEccCCC-EE
Q psy7062 80 RARIWDLSLC-------------------------------------------------FI---QQVNALRITPDKQ-LL 106 (148)
Q Consensus 80 ~i~l~d~~~~-------------------------------------------------~~---~~i~~~~~sp~~~-~l 106 (148)
++++||.++. +. ..+.++.|+|... .|
T Consensus 125 tlKVWDtnTlQ~a~~F~me~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SGs~sH~LsGHr~~vlaV~Wsp~~e~vL 204 (397)
T KOG4283|consen 125 TLKVWDTNTLQEAVDFKMEGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASGSFSHTLSGHRDGVLAVEWSPSSEWVL 204 (397)
T ss_pred eEEEeecccceeeEEeecCceeehhhcChhhhcceEEEEecCCCcEEEEeccCCcceeeeccccCceEEEEeccCceeEE
Confidence 9999999875 11 6788999999665 67
Q ss_pred EEEecCCceecCeeEEEeecCCC
Q psy7062 107 ASAEELSCCYCGAAVFVYNSCYP 129 (148)
Q Consensus 107 ~~~~~d~~~~~~~~i~~~d~~~~ 129 (148)
++|+.|| .|++||++..
T Consensus 205 atgsaDg------~irlWDiRra 221 (397)
T KOG4283|consen 205 ATGSADG------AIRLWDIRRA 221 (397)
T ss_pred EecCCCc------eEEEEEeecc
Confidence 7888988 9999999854
No 121
>KOG0973|consensus
Probab=99.39 E-value=3e-12 Score=100.11 Aligned_cols=106 Identities=14% Similarity=0.211 Sum_probs=89.6
Q ss_pred cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----
Q psy7062 14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC---- 89 (148)
Q Consensus 14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~---- 89 (148)
+..++|+|+ +.+||+++.|++|.+||..+. +.+..+.+|.+.|.++.|.|-|+++++-+.|+++++|++.+.
T Consensus 132 V~Dv~Wsp~--~~~lvS~s~DnsViiwn~~tF--~~~~vl~~H~s~VKGvs~DP~Gky~ASqsdDrtikvwrt~dw~i~k 207 (942)
T KOG0973|consen 132 VLDVNWSPD--DSLLVSVSLDNSVIIWNAKTF--ELLKVLRGHQSLVKGVSWDPIGKYFASQSDDRTLKVWRTSDWGIEK 207 (942)
T ss_pred cceeccCCC--ccEEEEecccceEEEEccccc--eeeeeeecccccccceEECCccCeeeeecCCceEEEEEcccceeeE
Confidence 467888886 999999999999999999998 899999999999999999999999999999999999997653
Q ss_pred -----cc-----ccceEEEEccCCCEEEEEecCCceecCeeEEEee
Q psy7062 90 -----FI-----QQVNALRITPDKQLLASAEELSCCYCGAAVFVYN 125 (148)
Q Consensus 90 -----~~-----~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d 125 (148)
|+ ..+..+.|||||++|++...-. ....++.+.+
T Consensus 208 ~It~pf~~~~~~T~f~RlSWSPDG~~las~nA~n--~~~~~~~Iie 251 (942)
T KOG0973|consen 208 SITKPFEESPLTTFFLRLSWSPDGHHLASPNAVN--GGKSTIAIIE 251 (942)
T ss_pred eeccchhhCCCcceeeecccCCCcCeecchhhcc--CCcceeEEEe
Confidence 33 6678899999999999975322 1234555554
No 122
>KOG0639|consensus
Probab=99.39 E-value=1.4e-12 Score=95.56 Aligned_cols=112 Identities=14% Similarity=0.164 Sum_probs=92.1
Q ss_pred EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----
Q psy7062 15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC----- 89 (148)
Q Consensus 15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~----- 89 (148)
..+...++ |+.|.+|++-.++.+||+..........+.......+.++.+||.+..++++.||.|.+||+++.
T Consensus 469 RSckL~pd--grtLivGGeastlsiWDLAapTprikaeltssapaCyALa~spDakvcFsccsdGnI~vwDLhnq~~Vrq 546 (705)
T KOG0639|consen 469 RSCKLLPD--GRTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDAKVCFSCCSDGNIAVWDLHNQTLVRQ 546 (705)
T ss_pred eeeEecCC--CceEEeccccceeeeeeccCCCcchhhhcCCcchhhhhhhcCCccceeeeeccCCcEEEEEcccceeeec
Confidence 45555666 88889989999999999988733333444434456788999999999999999999999999987
Q ss_pred cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceec
Q psy7062 90 FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVA 134 (148)
Q Consensus 90 ~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~ 134 (148)
|+ ....|+..+++|..|-+|+-|. +|+-||++....+..
T Consensus 547 fqGhtDGascIdis~dGtklWTGGlDn------tvRcWDlregrqlqq 588 (705)
T KOG0639|consen 547 FQGHTDGASCIDISKDGTKLWTGGLDN------TVRCWDLREGRQLQQ 588 (705)
T ss_pred ccCCCCCceeEEecCCCceeecCCCcc------ceeehhhhhhhhhhh
Confidence 54 7899999999999999999988 999999997765543
No 123
>KOG1036|consensus
Probab=99.38 E-value=1.5e-11 Score=85.07 Aligned_cols=104 Identities=15% Similarity=0.244 Sum_probs=86.5
Q ss_pred CcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc---
Q psy7062 13 GQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC--- 89 (148)
Q Consensus 13 ~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~--- 89 (148)
+...+.|++. .+.+|++ +-|+++++||+... .....+ .|...+.+.+|.+ ...+++|+.||.++.+|++.+
T Consensus 15 ~IS~v~f~~~-~~~LLvs-sWDgslrlYdv~~~--~l~~~~-~~~~plL~c~F~d-~~~~~~G~~dg~vr~~Dln~~~~~ 88 (323)
T KOG1036|consen 15 GISSVKFSPS-SSDLLVS-SWDGSLRLYDVPAN--SLKLKF-KHGAPLLDCAFAD-ESTIVTGGLDGQVRRYDLNTGNED 88 (323)
T ss_pred ceeeEEEcCc-CCcEEEE-eccCcEEEEeccch--hhhhhe-ecCCceeeeeccC-CceEEEeccCceEEEEEecCCcce
Confidence 4578888844 3566666 89999999999986 444455 4899999999977 567889999999999999988
Q ss_pred -cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCC
Q psy7062 90 -FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCY 128 (148)
Q Consensus 90 -~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~ 128 (148)
+. .++.|+.+.+....+++|+.|+ +|++||.+.
T Consensus 89 ~igth~~~i~ci~~~~~~~~vIsgsWD~------~ik~wD~R~ 125 (323)
T KOG1036|consen 89 QIGTHDEGIRCIEYSYEVGCVISGSWDK------TIKFWDPRN 125 (323)
T ss_pred eeccCCCceEEEEeeccCCeEEEcccCc------cEEEEeccc
Confidence 22 8899999999888999999988 999999985
No 124
>KOG0274|consensus
Probab=99.38 E-value=9.6e-12 Score=94.34 Aligned_cols=102 Identities=16% Similarity=0.219 Sum_probs=88.4
Q ss_pred CccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc--c---c---ccce
Q psy7062 24 LVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC--F---I---QQVN 95 (148)
Q Consensus 24 ~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~--~---~---~~i~ 95 (148)
.+.+|++|+.|.++++||..++ .....+.+|.+.+.++.. .+..+++|+.|.++++|++.++ + . .+|+
T Consensus 260 ~~~~lvsgS~D~t~rvWd~~sg--~C~~~l~gh~stv~~~~~--~~~~~~sgs~D~tVkVW~v~n~~~l~l~~~h~~~V~ 335 (537)
T KOG0274|consen 260 GGDKLVSGSTDKTERVWDCSTG--ECTHSLQGHTSSVRCLTI--DPFLLVSGSRDNTVKVWDVTNGACLNLLRGHTGPVN 335 (537)
T ss_pred CCCEEEEEecCCcEEeEecCCC--cEEEEecCCCceEEEEEc--cCceEeeccCCceEEEEeccCcceEEEeccccccEE
Confidence 3889999999999999999999 999999999999988755 5567788999999999999988 2 2 7888
Q ss_pred EEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceeccCc
Q psy7062 96 ALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVASNT 137 (148)
Q Consensus 96 ~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~~~ 137 (148)
++..+ +..+++|+.|+ +|++||+.+.+......+
T Consensus 336 ~v~~~--~~~lvsgs~d~------~v~VW~~~~~~cl~sl~g 369 (537)
T KOG0274|consen 336 CVQLD--EPLLVSGSYDG------TVKVWDPRTGKCLKSLSG 369 (537)
T ss_pred EEEec--CCEEEEEecCc------eEEEEEhhhceeeeeecC
Confidence 88885 88999999988 999999997777766655
No 125
>KOG2394|consensus
Probab=99.38 E-value=2.4e-12 Score=94.74 Aligned_cols=85 Identities=20% Similarity=0.362 Sum_probs=74.6
Q ss_pred CcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc--c
Q psy7062 13 GQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC--F 90 (148)
Q Consensus 13 ~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~--~ 90 (148)
..+.++|+++ |++||+.+.|+.+|+||+.+. +.+..++..-....|++|||||+++++|++|..+.+|.+... .
T Consensus 292 ~in~f~FS~D--G~~LA~VSqDGfLRvF~fdt~--eLlg~mkSYFGGLLCvcWSPDGKyIvtGGEDDLVtVwSf~erRVV 367 (636)
T KOG2394|consen 292 SINEFAFSPD--GKYLATVSQDGFLRIFDFDTQ--ELLGVMKSYFGGLLCVCWSPDGKYIVTGGEDDLVTVWSFEERRVV 367 (636)
T ss_pred cccceeEcCC--CceEEEEecCceEEEeeccHH--HHHHHHHhhccceEEEEEcCCccEEEecCCcceEEEEEeccceEE
Confidence 3567888886 999999999999999999998 777888878889999999999999999999999999999877 1
Q ss_pred c------ccceEEEEcc
Q psy7062 91 I------QQVNALRITP 101 (148)
Q Consensus 91 ~------~~i~~~~~sp 101 (148)
. +++..++|.|
T Consensus 368 ARGqGHkSWVs~VaFDp 384 (636)
T KOG2394|consen 368 ARGQGHKSWVSVVAFDP 384 (636)
T ss_pred EeccccccceeeEeecc
Confidence 1 7788888874
No 126
>KOG0646|consensus
Probab=99.37 E-value=1.7e-11 Score=88.79 Aligned_cols=117 Identities=17% Similarity=0.284 Sum_probs=95.8
Q ss_pred cCcEEEEEeCCCCccEEEEEecCCeEEEEeCC-------CCCCCceEEecCCCCCEEEEEEccCC--CEEEEEeCCCcEE
Q psy7062 12 FGQISTVFDSKHLVEMVAALGGYQHIRMYDFG-------SNNPNPVINCEGVSKNVVEVGFQEDG--KWMFTGGEDCRAR 82 (148)
Q Consensus 12 ~~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~-------~~~~~~~~~~~~~~~~i~~~~~sp~~--~~l~~~~~~~~i~ 82 (148)
+...++.|.-+ +.++++|+.||.|.+|++- +..++++..+..|+-.|+.+...+.| ..+++++.|.+++
T Consensus 124 Q~ITcL~fs~d--gs~iiTgskDg~V~vW~l~~lv~a~~~~~~~p~~~f~~HtlsITDl~ig~Gg~~~rl~TaS~D~t~k 201 (476)
T KOG0646|consen 124 QSITCLKFSDD--GSHIITGSKDGAVLVWLLTDLVSADNDHSVKPLHIFSDHTLSITDLQIGSGGTNARLYTASEDRTIK 201 (476)
T ss_pred cceeEEEEeCC--CcEEEecCCCccEEEEEEEeecccccCCCccceeeeccCcceeEEEEecCCCccceEEEecCCceEE
Confidence 34567888777 9999999999999999873 22346788899999999999988764 4789999999999
Q ss_pred EEECCcc--------------------------------------------------------------cc-----ccce
Q psy7062 83 IWDLSLC--------------------------------------------------------------FI-----QQVN 95 (148)
Q Consensus 83 l~d~~~~--------------------------------------------------------------~~-----~~i~ 95 (148)
+||+..+ +. ..|.
T Consensus 202 ~wdlS~g~LLlti~fp~si~av~lDpae~~~yiGt~~G~I~~~~~~~~~~~~~~v~~k~~~~~~t~~~~~~Gh~~~~~IT 281 (476)
T KOG0646|consen 202 LWDLSLGVLLLTITFPSSIKAVALDPAERVVYIGTEEGKIFQNLLFKLSGQSAGVNQKGRHEENTQINVLVGHENESAIT 281 (476)
T ss_pred EEEeccceeeEEEecCCcceeEEEcccccEEEecCCcceEEeeehhcCCcccccccccccccccceeeeeccccCCccee
Confidence 9999766 00 3789
Q ss_pred EEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceeccC
Q psy7062 96 ALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVASN 136 (148)
Q Consensus 96 ~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~~ 136 (148)
|++.+-||..|++|+.|| +|.+||+.+.+.+..+.
T Consensus 282 cLais~DgtlLlSGd~dg------~VcvWdi~S~Q~iRtl~ 316 (476)
T KOG0646|consen 282 CLAISTDGTLLLSGDEDG------KVCVWDIYSKQCIRTLQ 316 (476)
T ss_pred EEEEecCccEEEeeCCCC------CEEEEecchHHHHHHHh
Confidence 999999999999999999 99999987666555444
No 127
>KOG0274|consensus
Probab=99.37 E-value=2e-11 Score=92.67 Aligned_cols=100 Identities=13% Similarity=0.168 Sum_probs=87.0
Q ss_pred ccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----cc---ccceE
Q psy7062 25 VEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-----FI---QQVNA 96 (148)
Q Consensus 25 ~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-----~~---~~i~~ 96 (148)
..++++|+.|.+|++|++.++ ..+..+.+|...|.++..+ +..+++|+.|++|++||+... +. .++.+
T Consensus 301 ~~~~~sgs~D~tVkVW~v~n~--~~l~l~~~h~~~V~~v~~~--~~~lvsgs~d~~v~VW~~~~~~cl~sl~gH~~~V~s 376 (537)
T KOG0274|consen 301 PFLLVSGSRDNTVKVWDVTNG--ACLNLLRGHTGPVNCVQLD--EPLLVSGSYDGTVKVWDPRTGKCLKSLSGHTGRVYS 376 (537)
T ss_pred CceEeeccCCceEEEEeccCc--ceEEEeccccccEEEEEec--CCEEEEEecCceEEEEEhhhceeeeeecCCcceEEE
Confidence 677888899999999999988 8999998999999999886 889999999999999999987 33 88888
Q ss_pred EEEccCCCEEEEEecCCceecCeeEEEeecCCC-cceecc
Q psy7062 97 LRITPDKQLLASAEELSCCYCGAAVFVYNSCYP-AAVVAS 135 (148)
Q Consensus 97 ~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~-~~~~~~ 135 (148)
+.+.+. ..+++|+.|+ .|++||+++. +.+..+
T Consensus 377 l~~~~~-~~~~Sgs~D~------~IkvWdl~~~~~c~~tl 409 (537)
T KOG0274|consen 377 LIVDSE-NRLLSGSLDT------TIKVWDLRTKRKCIHTL 409 (537)
T ss_pred EEecCc-ceEEeeeecc------ceEeecCCchhhhhhhh
Confidence 877554 8999999988 9999999988 554433
No 128
>KOG2394|consensus
Probab=99.36 E-value=2.2e-11 Score=89.83 Aligned_cols=112 Identities=20% Similarity=0.189 Sum_probs=84.6
Q ss_pred cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCC--------------------------CceEEecCCCCCEEEEEEcc
Q psy7062 14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNP--------------------------NPVINCEGVSKNVVEVGFQE 67 (148)
Q Consensus 14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~--------------------------~~~~~~~~~~~~i~~~~~sp 67 (148)
..+..|=+-..+.+|++ -.++.+.+||...... .++..+..-...|..++|+|
T Consensus 222 vT~ikWvpg~~~~Fl~a-~~sGnlyly~~~~~~~~t~p~~~~~k~~~~f~i~t~ksk~~rNPv~~w~~~~g~in~f~FS~ 300 (636)
T KOG2394|consen 222 VTCIKWVPGSDSLFLVA-HASGNLYLYDKEIVCGATAPSYQALKDGDQFAILTSKSKKTRNPVARWHIGEGSINEFAFSP 300 (636)
T ss_pred eEEEEEEeCCCceEEEE-EecCceEEeeccccccCCCCcccccCCCCeeEEeeeeccccCCccceeEeccccccceeEcC
Confidence 45677777665666666 8888888886642110 11111111234788999999
Q ss_pred CCCEEEEEeCCCcEEEEECCcc-----cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcce
Q psy7062 68 DGKWMFTGGEDCRARIWDLSLC-----FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAV 132 (148)
Q Consensus 68 ~~~~l~~~~~~~~i~l~d~~~~-----~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~ 132 (148)
||++|++.+.||.+++||..+. .+ +...|++|||||++|++|++|. .|.+|.....+.+
T Consensus 301 DG~~LA~VSqDGfLRvF~fdt~eLlg~mkSYFGGLLCvcWSPDGKyIvtGGEDD------LVtVwSf~erRVV 367 (636)
T KOG2394|consen 301 DGKYLATVSQDGFLRIFDFDTQELLGVMKSYFGGLLCVCWSPDGKYIVTGGEDD------LVTVWSFEERRVV 367 (636)
T ss_pred CCceEEEEecCceEEEeeccHHHHHHHHHhhccceEEEEEcCCccEEEecCCcc------eEEEEEeccceEE
Confidence 9999999999999999999887 22 8899999999999999999988 8999998765544
No 129
>KOG1332|consensus
Probab=99.35 E-value=1.3e-11 Score=83.32 Aligned_cols=108 Identities=10% Similarity=0.077 Sum_probs=90.0
Q ss_pred EEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCC--CEEEEEeCCCcEEEEECCcc----
Q psy7062 16 STVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDG--KWMFTGGEDCRARIWDLSLC---- 89 (148)
Q Consensus 16 ~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~--~~l~~~~~~~~i~l~d~~~~---- 89 (148)
.++|.++..|.+||+++.|+.|.+|.-.++.-........|...|++++|.|.+ -.|++++.||.|.+.+.+..
T Consensus 61 qv~wahPk~G~iLAScsYDgkVIiWke~~g~w~k~~e~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~g~w~ 140 (299)
T KOG1332|consen 61 KVAWAHPKFGTILASCSYDGKVIIWKEENGRWTKAYEHAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSSGGWT 140 (299)
T ss_pred EEeecccccCcEeeEeecCceEEEEecCCCchhhhhhhhhhcccceeecccccccceEEEEeeCCCcEEEEEEcCCCCcc
Confidence 455566667999999999999999999988555667778899999999999964 57899999999999999765
Q ss_pred ----cc---ccceEEEEccC---C-----------CEEEEEecCCceecCeeEEEeecCCC
Q psy7062 90 ----FI---QQVNALRITPD---K-----------QLLASAEELSCCYCGAAVFVYNSCYP 129 (148)
Q Consensus 90 ----~~---~~i~~~~~sp~---~-----------~~l~~~~~d~~~~~~~~i~~~d~~~~ 129 (148)
.. ..+++++|.|. | +.|++|+.|. .|++|+..+.
T Consensus 141 t~ki~~aH~~GvnsVswapa~~~g~~~~~~~~~~~krlvSgGcDn------~VkiW~~~~~ 195 (299)
T KOG1332|consen 141 TSKIVFAHEIGVNSVSWAPASAPGSLVDQGPAAKVKRLVSGGCDN------LVKIWKFDSD 195 (299)
T ss_pred chhhhhccccccceeeecCcCCCccccccCcccccceeeccCCcc------ceeeeecCCc
Confidence 11 77899999985 4 5689999877 8999998765
No 130
>KOG2055|consensus
Probab=99.35 E-value=4.1e-11 Score=86.88 Aligned_cols=78 Identities=17% Similarity=0.264 Sum_probs=59.2
Q ss_pred eeeecC-cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCC-CEEEEEEccCCCEEEEEeCCCcEEEEE
Q psy7062 8 ILTAFG-QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSK-NVVEVGFQEDGKWMFTGGEDCRARIWD 85 (148)
Q Consensus 8 ~~~~~~-~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~-~i~~~~~sp~~~~l~~~~~~~~i~l~d 85 (148)
-++..| ...+.|+.+ +..|++++.+|.|.+||+++. ..+..+....+ .-++++.+++|.++++|+..|.+.+||
T Consensus 340 s~KieG~v~~~~fsSd--sk~l~~~~~~GeV~v~nl~~~--~~~~rf~D~G~v~gts~~~S~ng~ylA~GS~~GiVNIYd 415 (514)
T KOG2055|consen 340 SFKIEGVVSDFTFSSD--SKELLASGGTGEVYVWNLRQN--SCLHRFVDDGSVHGTSLCISLNGSYLATGSDSGIVNIYD 415 (514)
T ss_pred eeeeccEEeeEEEecC--CcEEEEEcCCceEEEEecCCc--ceEEEEeecCccceeeeeecCCCceEEeccCcceEEEec
Confidence 345665 456777765 566666688999999999998 77877763222 235667779999999999999999999
Q ss_pred CCcc
Q psy7062 86 LSLC 89 (148)
Q Consensus 86 ~~~~ 89 (148)
.++.
T Consensus 416 ~~s~ 419 (514)
T KOG2055|consen 416 GNSC 419 (514)
T ss_pred cchh
Confidence 7543
No 131
>KOG0642|consensus
Probab=99.35 E-value=1e-11 Score=91.76 Aligned_cols=111 Identities=15% Similarity=0.292 Sum_probs=92.0
Q ss_pred CcEEEEEeCCCCccEEEEEecCCeEEEEeCCC------CCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEEC
Q psy7062 13 GQISTVFDSKHLVEMVAALGGYQHIRMYDFGS------NNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDL 86 (148)
Q Consensus 13 ~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~------~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~ 86 (148)
+....+|.+. ...|++++.++++++|++.. ...+++.+|.+|...|.++++.+++..+++|+-||+|+.|++
T Consensus 296 ~ir~l~~~~s--ep~lit~sed~~lk~WnLqk~~~s~~~~~epi~tfraH~gPVl~v~v~~n~~~~ysgg~Dg~I~~w~~ 373 (577)
T KOG0642|consen 296 CIRALAFHPS--EPVLITASEDGTLKLWNLQKAKKSAEKDVEPILTFRAHEGPVLCVVVPSNGEHCYSGGIDGTIRCWNL 373 (577)
T ss_pred hhhhhhcCCC--CCeEEEeccccchhhhhhcccCCccccceeeeEEEecccCceEEEEecCCceEEEeeccCceeeeecc
Confidence 4455566665 66788999999999999932 123578899999999999999999999999999999999977
Q ss_pred Ccc---------------cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcc
Q psy7062 87 SLC---------------FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAA 131 (148)
Q Consensus 87 ~~~---------------~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~ 131 (148)
... |. ..+|.+++|+....|++++.|| +++.|+.....+
T Consensus 374 p~n~dp~ds~dp~vl~~~l~Ghtdavw~l~~s~~~~~Llscs~Dg------Tvr~w~~~~~~~ 430 (577)
T KOG0642|consen 374 PPNQDPDDSYDPSVLSGTLLGHTDAVWLLALSSTKDRLLSCSSDG------TVRLWEPTEESP 430 (577)
T ss_pred CCCCCcccccCcchhccceeccccceeeeeecccccceeeecCCc------eEEeeccCCcCc
Confidence 532 22 7789999999999999999999 999999875554
No 132
>KOG0649|consensus
Probab=99.34 E-value=4.9e-11 Score=80.64 Aligned_cols=111 Identities=16% Similarity=0.192 Sum_probs=85.0
Q ss_pred eeecCcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCc
Q psy7062 9 LTAFGQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSL 88 (148)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~ 88 (148)
...+..++...+|.. +.++.+ +.|+.+..||++++ +..+.+++|+.-+-++........+++|++||++++||+++
T Consensus 112 ~evPeINam~ldP~e-nSi~~A-gGD~~~y~~dlE~G--~i~r~~rGHtDYvH~vv~R~~~~qilsG~EDGtvRvWd~kt 187 (325)
T KOG0649|consen 112 VEVPEINAMWLDPSE-NSILFA-GGDGVIYQVDLEDG--RIQREYRGHTDYVHSVVGRNANGQILSGAEDGTVRVWDTKT 187 (325)
T ss_pred ccCCccceeEeccCC-CcEEEe-cCCeEEEEEEecCC--EEEEEEcCCcceeeeeeecccCcceeecCCCccEEEEeccc
Confidence 345566778888875 344444 57999999999999 88999999999999988866666789999999999999998
Q ss_pred c-----cc-------------ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcce
Q psy7062 89 C-----FI-------------QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAV 132 (148)
Q Consensus 89 ~-----~~-------------~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~ 132 (148)
. +. .+|-+++ -+..++++|+. ..+.+|+++..+..
T Consensus 188 ~k~v~~ie~yk~~~~lRp~~g~wigala--~~edWlvCGgG-------p~lslwhLrsse~t 240 (325)
T KOG0649|consen 188 QKHVSMIEPYKNPNLLRPDWGKWIGALA--VNEDWLVCGGG-------PKLSLWHLRSSEST 240 (325)
T ss_pred cceeEEeccccChhhcCcccCceeEEEe--ccCceEEecCC-------CceeEEeccCCCce
Confidence 7 11 3344443 46778887763 36999999976654
No 133
>KOG0268|consensus
Probab=99.33 E-value=3.9e-12 Score=89.83 Aligned_cols=111 Identities=14% Similarity=0.177 Sum_probs=92.2
Q ss_pred ecCcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-
Q psy7062 11 AFGQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC- 89 (148)
Q Consensus 11 ~~~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~- 89 (148)
.+...++.|+|.. ..+|+++++|++|.+||+++. .++.... -+.....|+|+|++..+.+++.|..+..||.+..
T Consensus 187 ~Dti~svkfNpvE-TsILas~~sDrsIvLyD~R~~--~Pl~KVi-~~mRTN~IswnPeafnF~~a~ED~nlY~~DmR~l~ 262 (433)
T KOG0268|consen 187 ADSISSVKFNPVE-TSILASCASDRSIVLYDLRQA--SPLKKVI-LTMRTNTICWNPEAFNFVAANEDHNLYTYDMRNLS 262 (433)
T ss_pred CCceeEEecCCCc-chheeeeccCCceEEEecccC--Cccceee-eeccccceecCccccceeeccccccceehhhhhhc
Confidence 3345778888865 678899889999999999998 6665543 3556678999998889999999999999999876
Q ss_pred -----cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcc
Q psy7062 90 -----FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAA 131 (148)
Q Consensus 90 -----~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~ 131 (148)
+. +.+..+.|||.|+-+++|+-|. +|++|.......
T Consensus 263 ~p~~v~~dhvsAV~dVdfsptG~EfvsgsyDk------sIRIf~~~~~~S 306 (433)
T KOG0268|consen 263 RPLNVHKDHVSAVMDVDFSPTGQEFVSGSYDK------SIRIFPVNHGHS 306 (433)
T ss_pred ccchhhcccceeEEEeccCCCcchhccccccc------eEEEeecCCCcc
Confidence 22 7899999999999999999998 999999875543
No 134
>KOG0647|consensus
Probab=99.33 E-value=4.2e-11 Score=82.88 Aligned_cols=103 Identities=17% Similarity=0.226 Sum_probs=82.0
Q ss_pred EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCC--EEEEEeCCCcEEEEECCcc---
Q psy7062 15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGK--WMFTGGEDCRARIWDLSLC--- 89 (148)
Q Consensus 15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~--~l~~~~~~~~i~l~d~~~~--- 89 (148)
-+++|+-+ |..+++|+.|+.+++||+.++ ...++..|...|..+.|-+... .|++||+|.+++.||.+..
T Consensus 76 L~v~Wsdd--gskVf~g~~Dk~~k~wDL~S~---Q~~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~pv 150 (347)
T KOG0647|consen 76 LDVCWSDD--GSKVFSGGCDKQAKLWDLASG---QVSQVAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSNPV 150 (347)
T ss_pred EEEEEccC--CceEEeeccCCceEEEEccCC---CeeeeeecccceeEEEEecCCCcceeEecccccceeecccCCCCee
Confidence 45666666 788889899999999999997 5667778999999999987665 8999999999999999987
Q ss_pred ----ccccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062 90 ----FIQQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA 130 (148)
Q Consensus 90 ----~~~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~ 130 (148)
|..++.++.. -...++++..++ .|.+|+++++.
T Consensus 151 ~t~~LPeRvYa~Dv--~~pm~vVata~r------~i~vynL~n~~ 187 (347)
T KOG0647|consen 151 ATLQLPERVYAADV--LYPMAVVATAER------HIAVYNLENPP 187 (347)
T ss_pred eeeeccceeeehhc--cCceeEEEecCC------cEEEEEcCCCc
Confidence 2266666644 445566676666 89999997653
No 135
>KOG1036|consensus
Probab=99.33 E-value=1.1e-10 Score=80.80 Aligned_cols=104 Identities=13% Similarity=0.213 Sum_probs=83.7
Q ss_pred EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----
Q psy7062 15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC----- 89 (148)
Q Consensus 15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~----- 89 (148)
-.++|... ...++|+.|+.|+++|+.++ ....+..|...+.++.+++....+++|++|++|++||.+..
T Consensus 58 L~c~F~d~---~~~~~G~~dg~vr~~Dln~~---~~~~igth~~~i~ci~~~~~~~~vIsgsWD~~ik~wD~R~~~~~~~ 131 (323)
T KOG1036|consen 58 LDCAFADE---STIVTGGLDGQVRRYDLNTG---NEDQIGTHDEGIRCIEYSYEVGCVISGSWDKTIKFWDPRNKVVVGT 131 (323)
T ss_pred eeeeccCC---ceEEEeccCceEEEEEecCC---cceeeccCCCceEEEEeeccCCeEEEcccCccEEEEeccccccccc
Confidence 45555553 45677799999999999997 45566679999999999999999999999999999999965
Q ss_pred cc--ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcce
Q psy7062 90 FI--QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAV 132 (148)
Q Consensus 90 ~~--~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~ 132 (148)
+. ..|.++.. .+..|++|+.+. ++.+||+++...+
T Consensus 132 ~d~~kkVy~~~v--~g~~LvVg~~~r------~v~iyDLRn~~~~ 168 (323)
T KOG1036|consen 132 FDQGKKVYCMDV--SGNRLVVGTSDR------KVLIYDLRNLDEP 168 (323)
T ss_pred cccCceEEEEec--cCCEEEEeecCc------eEEEEEcccccch
Confidence 22 55666654 778889988877 9999999976543
No 136
>KOG0321|consensus
Probab=99.32 E-value=1.3e-11 Score=92.49 Aligned_cols=107 Identities=20% Similarity=0.232 Sum_probs=83.7
Q ss_pred EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEE--ecCCCCCEEEEEEcc-CCCEEEEEeCCCcEEEEECCcc--
Q psy7062 15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVIN--CEGVSKNVVEVGFQE-DGKWMFTGGEDCRARIWDLSLC-- 89 (148)
Q Consensus 15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~--~~~~~~~i~~~~~sp-~~~~l~~~~~~~~i~l~d~~~~-- 89 (148)
..++|.|- ...|++++.|.++++||+++. +.... +.+|...+.+++|.| +...+++|+.||.+.|||++-.
T Consensus 104 fDl~wapg--e~~lVsasGDsT~r~Wdvk~s--~l~G~~~~~GH~~SvkS~cf~~~n~~vF~tGgRDg~illWD~R~n~~ 179 (720)
T KOG0321|consen 104 FDLKWAPG--ESLLVSASGDSTIRPWDVKTS--RLVGGRLNLGHTGSVKSECFMPTNPAVFCTGGRDGEILLWDCRCNGV 179 (720)
T ss_pred EeeccCCC--ceeEEEccCCceeeeeeeccc--eeecceeecccccccchhhhccCCCcceeeccCCCcEEEEEEeccch
Confidence 44444552 667888899999999999998 55554 889999999999999 5568899999999999999743
Q ss_pred -----------------------cc----------ccceE---EEEccCCCEEEEEec-CCceecCeeEEEeecCCCcc
Q psy7062 90 -----------------------FI----------QQVNA---LRITPDKQLLASAEE-LSCCYCGAAVFVYNSCYPAA 131 (148)
Q Consensus 90 -----------------------~~----------~~i~~---~~~sp~~~~l~~~~~-d~~~~~~~~i~~~d~~~~~~ 131 (148)
+. ..|.. +.+..|...|++++. |+ .|++||++....
T Consensus 180 d~~e~~~~~~~~~~n~~ptpskp~~kr~~k~kA~s~ti~ssvTvv~fkDe~tlaSaga~D~------~iKVWDLRk~~~ 252 (720)
T KOG0321|consen 180 DALEEFDNRIYGRHNTAPTPSKPLKKRIRKWKAASNTIFSSVTVVLFKDESTLASAGAADS------TIKVWDLRKNYT 252 (720)
T ss_pred hhHHHHhhhhhccccCCCCCCchhhccccccccccCceeeeeEEEEEeccceeeeccCCCc------ceEEEeeccccc
Confidence 00 23344 556678888999887 66 899999997653
No 137
>KOG0293|consensus
Probab=99.31 E-value=2.7e-11 Score=87.01 Aligned_cols=106 Identities=19% Similarity=0.221 Sum_probs=89.8
Q ss_pred cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEec-CCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc---
Q psy7062 14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCE-GVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC--- 89 (148)
Q Consensus 14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~-~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~--- 89 (148)
..-+.|+|+ .++|++|+.+..+++||+.++ .....+. ++...+.+.+|+|||.-+++|+.|+.+..||+...
T Consensus 272 V~yi~wSPD--dryLlaCg~~e~~~lwDv~tg--d~~~~y~~~~~~S~~sc~W~pDg~~~V~Gs~dr~i~~wdlDgn~~~ 347 (519)
T KOG0293|consen 272 VSYIMWSPD--DRYLLACGFDEVLSLWDVDTG--DLRHLYPSGLGFSVSSCAWCPDGFRFVTGSPDRTIIMWDLDGNILG 347 (519)
T ss_pred eEEEEECCC--CCeEEecCchHheeeccCCcc--hhhhhcccCcCCCcceeEEccCCceeEecCCCCcEEEecCCcchhh
Confidence 456778888 788999899999999999998 6665554 34577899999999999999999999999999876
Q ss_pred -cc----ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCC
Q psy7062 90 -FI----QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYP 129 (148)
Q Consensus 90 -~~----~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~ 129 (148)
.+ ..+.+++.++||++++..+.|. .|++++....
T Consensus 348 ~W~gvr~~~v~dlait~Dgk~vl~v~~d~------~i~l~~~e~~ 386 (519)
T KOG0293|consen 348 NWEGVRDPKVHDLAITYDGKYVLLVTVDK------KIRLYNREAR 386 (519)
T ss_pred cccccccceeEEEEEcCCCcEEEEEeccc------ceeeechhhh
Confidence 22 6699999999999999999988 8999987644
No 138
>KOG2096|consensus
Probab=99.31 E-value=5.4e-11 Score=83.15 Aligned_cols=100 Identities=9% Similarity=0.139 Sum_probs=83.6
Q ss_pred EeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECC---cc------
Q psy7062 19 FDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLS---LC------ 89 (148)
Q Consensus 19 ~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~---~~------ 89 (148)
+-.-..+.++.+++.|.+|.+|+++ + +.+..+......-+..++||+|+++++++...-+++|.+- .+
T Consensus 193 iGiA~~~k~imsas~dt~i~lw~lk-G--q~L~~idtnq~~n~~aavSP~GRFia~~gFTpDVkVwE~~f~kdG~fqev~ 269 (420)
T KOG2096|consen 193 IGIAGNAKYIMSASLDTKICLWDLK-G--QLLQSIDTNQSSNYDAAVSPDGRFIAVSGFTPDVKVWEPIFTKDGTFQEVK 269 (420)
T ss_pred EeecCCceEEEEecCCCcEEEEecC-C--ceeeeeccccccccceeeCCCCcEEEEecCCCCceEEEEEeccCcchhhhh
Confidence 3333458999999999999999999 4 6777776655566778999999999999999999999883 23
Q ss_pred --cc-----ccceEEEEccCCCEEEEEecCCceecCeeEEEeecC
Q psy7062 90 --FI-----QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSC 127 (148)
Q Consensus 90 --~~-----~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~ 127 (148)
|+ +.+..++|+++...+++.+.|| ++++||..
T Consensus 270 rvf~LkGH~saV~~~aFsn~S~r~vtvSkDG------~wriwdtd 308 (420)
T KOG2096|consen 270 RVFSLKGHQSAVLAAAFSNSSTRAVTVSKDG------KWRIWDTD 308 (420)
T ss_pred hhheeccchhheeeeeeCCCcceeEEEecCC------cEEEeecc
Confidence 22 7799999999999999999999 99999854
No 139
>KOG1188|consensus
Probab=99.30 E-value=6.9e-11 Score=82.97 Aligned_cols=110 Identities=20% Similarity=0.240 Sum_probs=84.4
Q ss_pred EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCC-CCEEEEEEccCCCEEEEEeC----CCcEEEEECCcc
Q psy7062 15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVS-KNVVEVGFQEDGKWMFTGGE----DCRARIWDLSLC 89 (148)
Q Consensus 15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~-~~i~~~~~sp~~~~l~~~~~----~~~i~l~d~~~~ 89 (148)
+.+.|........+.+|+.||+|++||+++.....+..+..++ ..-.+++.+-++..+++|.. +..+.+||++..
T Consensus 74 N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~~~~~~~~~f~~ld~nck~~ii~~GtE~~~s~A~v~lwDvR~~ 153 (376)
T KOG1188|consen 74 NGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESARISWTQQSGTPFICLDLNCKKNIIACGTELTRSDASVVLWDVRSE 153 (376)
T ss_pred cceEEecCCCCCeeEEeccCCeEEEEEeecchhhhheeccCCCCCcceEeeccCcCCeEEeccccccCceEEEEEEeccc
Confidence 4566654435778899999999999999988444555566665 34556666657778888764 467999999987
Q ss_pred ------cc----ccceEEEEcc-CCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062 90 ------FI----QQVNALRITP-DKQLLASAEELSCCYCGAAVFVYNSCYPA 130 (148)
Q Consensus 90 ------~~----~~i~~~~~sp-~~~~l~~~~~d~~~~~~~~i~~~d~~~~~ 130 (148)
+. ..|++++|+| +...|++|+.|| .|.++|+..+.
T Consensus 154 qq~l~~~~eSH~DDVT~lrFHP~~pnlLlSGSvDG------LvnlfD~~~d~ 199 (376)
T KOG1188|consen 154 QQLLRQLNESHNDDVTQLRFHPSDPNLLLSGSVDG------LVNLFDTKKDN 199 (376)
T ss_pred cchhhhhhhhccCcceeEEecCCCCCeEEeecccc------eEEeeecCCCc
Confidence 22 7899999999 678999999999 89999987553
No 140
>KOG0322|consensus
Probab=99.30 E-value=4.1e-11 Score=81.69 Aligned_cols=63 Identities=29% Similarity=0.419 Sum_probs=57.7
Q ss_pred CCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeec
Q psy7062 58 KNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-----FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNS 126 (148)
Q Consensus 58 ~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-----~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~ 126 (148)
..+..+.+.||++.++++++|+.+|+|..++. ++ ..+++++|+|+...++.++.|. +|.+|++
T Consensus 252 pGv~gvrIRpD~KIlATAGWD~RiRVyswrtl~pLAVLkyHsagvn~vAfspd~~lmAaaskD~------rISLWkL 322 (323)
T KOG0322|consen 252 PGVSGVRIRPDGKILATAGWDHRIRVYSWRTLNPLAVLKYHSAGVNAVAFSPDCELMAAASKDA------RISLWKL 322 (323)
T ss_pred CCccceEEccCCcEEeecccCCcEEEEEeccCCchhhhhhhhcceeEEEeCCCCchhhhccCCc------eEEeeec
Confidence 46788899999999999999999999999988 33 8899999999999999999988 9999986
No 141
>KOG1009|consensus
Probab=99.29 E-value=7e-11 Score=84.48 Aligned_cols=110 Identities=19% Similarity=0.340 Sum_probs=87.6
Q ss_pred EEEEeCCCCccEEEEEecCCeEEEEeCCCCC-------CCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECC-
Q psy7062 16 STVFDSKHLVEMVAALGGYQHIRMYDFGSNN-------PNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLS- 87 (148)
Q Consensus 16 ~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~-------~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~- 87 (148)
.+.|+.+. .+.+++|+.|..|++|.++... .+.+..+..|...|+.+.|+|+|..+++|+.++.+.+|...
T Consensus 18 s~dfq~n~-~~~laT~G~D~~iriW~v~r~~~~~~~~~V~y~s~Ls~H~~aVN~vRf~p~gelLASg~D~g~v~lWk~~~ 96 (434)
T KOG1009|consen 18 SVDFQKNS-LNKLATAGGDKDIRIWKVNRSEPGGGDMKVEYLSSLSRHTRAVNVVRFSPDGELLASGGDGGEVFLWKQGD 96 (434)
T ss_pred EEEeccCc-ccceecccCccceeeeeeeecCCCCCceeEEEeecccCCcceeEEEEEcCCcCeeeecCCCceEEEEEecC
Confidence 44444543 3389999999999999886541 12244567799999999999999999999999999999876
Q ss_pred -------cc-------------cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcce
Q psy7062 88 -------LC-------------FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAV 132 (148)
Q Consensus 88 -------~~-------------~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~ 132 (148)
+. +. ..+..++|+|+++++++++.|. .+++||+......
T Consensus 97 ~~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~d~~~l~s~s~dn------s~~l~Dv~~G~l~ 158 (434)
T KOG1009|consen 97 VRIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAWSPDSNFLVSGSVDN------SVRLWDVHAGQLL 158 (434)
T ss_pred cCCccccchhhhCccceEEEEEecccccchhhhhccCCCceeeeeeccc------eEEEEEeccceeE
Confidence 21 11 6688999999999999999977 8999998876543
No 142
>KOG0290|consensus
Probab=99.29 E-value=9.7e-11 Score=80.91 Aligned_cols=111 Identities=14% Similarity=0.188 Sum_probs=86.9
Q ss_pred cEEEEEeCC-CCccEEEEEecCCeEEEEeCCCCC-CCceEEecCCCCCEEEEEEccCCC-EEEEEeCCCcEEEEECCcc-
Q psy7062 14 QISTVFDSK-HLVEMVAALGGYQHIRMYDFGSNN-PNPVINCEGVSKNVVEVGFQEDGK-WMFTGGEDCRARIWDLSLC- 89 (148)
Q Consensus 14 ~~~~~~~~~-~~~~~l~~~~~d~~v~~~d~~~~~-~~~~~~~~~~~~~i~~~~~sp~~~-~l~~~~~~~~i~l~d~~~~- 89 (148)
.+...||.+ -..+++.+.+-|-++-+||++++. .....++-+|...|..++|...+. .+++++.||.+|+||++..
T Consensus 151 aPlTSFDWne~dp~~igtSSiDTTCTiWdie~~~~~~vkTQLIAHDKEV~DIaf~~~s~~~FASvgaDGSvRmFDLR~le 230 (364)
T KOG0290|consen 151 APLTSFDWNEVDPNLIGTSSIDTTCTIWDIETGVSGTVKTQLIAHDKEVYDIAFLKGSRDVFASVGADGSVRMFDLRSLE 230 (364)
T ss_pred CcccccccccCCcceeEeecccCeEEEEEEeeccccceeeEEEecCcceeEEEeccCccceEEEecCCCcEEEEEecccc
Confidence 345555532 226788888999999999999861 123566778999999999998665 7899999999999999865
Q ss_pred ----------------------------------------------------cc---ccceEEEEccC-CCEEEEEecCC
Q psy7062 90 ----------------------------------------------------FI---QQVNALRITPD-KQLLASAEELS 113 (148)
Q Consensus 90 ----------------------------------------------------~~---~~i~~~~~sp~-~~~l~~~~~d~ 113 (148)
++ +.++.++|.|. +.+|.+++.|.
T Consensus 231 HSTIIYE~p~~~~pLlRLswnkqDpnymATf~~dS~~V~iLDiR~P~tpva~L~~H~a~VNgIaWaPhS~~hictaGDD~ 310 (364)
T KOG0290|consen 231 HSTIIYEDPSPSTPLLRLSWNKQDPNYMATFAMDSNKVVILDIRVPCTPVARLRNHQASVNGIAWAPHSSSHICTAGDDC 310 (364)
T ss_pred cceEEecCCCCCCcceeeccCcCCchHHhhhhcCCceEEEEEecCCCcceehhhcCcccccceEecCCCCceeeecCCcc
Confidence 11 67889999995 56888999877
Q ss_pred ceecCeeEEEeecCCCc
Q psy7062 114 CCYCGAAVFVYNSCYPA 130 (148)
Q Consensus 114 ~~~~~~~i~~~d~~~~~ 130 (148)
++.+||+....
T Consensus 311 ------qaliWDl~q~~ 321 (364)
T KOG0290|consen 311 ------QALIWDLQQMP 321 (364)
T ss_pred ------eEEEEeccccc
Confidence 89999987543
No 143
>KOG0646|consensus
Probab=99.28 E-value=6.4e-11 Score=85.84 Aligned_cols=102 Identities=17% Similarity=0.234 Sum_probs=86.7
Q ss_pred CCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-------------
Q psy7062 23 HLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC------------- 89 (148)
Q Consensus 23 ~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~------------- 89 (148)
..|.+|+.|+..+.+.+|.+.++ +.+..+.+|=..|+++.|+-||.+++++++||.+++|++-..
T Consensus 91 n~G~~l~ag~i~g~lYlWelssG--~LL~v~~aHYQ~ITcL~fs~dgs~iiTgskDg~V~vW~l~~lv~a~~~~~~~p~~ 168 (476)
T KOG0646|consen 91 NLGYFLLAGTISGNLYLWELSSG--ILLNVLSAHYQSITCLKFSDDGSHIITGSKDGAVLVWLLTDLVSADNDHSVKPLH 168 (476)
T ss_pred CCceEEEeecccCcEEEEEeccc--cHHHHHHhhccceeEEEEeCCCcEEEecCCCccEEEEEEEeecccccCCCcccee
Confidence 34888888669999999999999 889999999999999999999999999999999999998544
Q ss_pred -cc---ccceEEEEccC--CCEEEEEecCCceecCeeEEEeecCCCcce
Q psy7062 90 -FI---QQVNALRITPD--KQLLASAEELSCCYCGAAVFVYNSCYPAAV 132 (148)
Q Consensus 90 -~~---~~i~~~~~sp~--~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~ 132 (148)
|. -+|..+...+. ...+++++.|. ++++||+......
T Consensus 169 ~f~~HtlsITDl~ig~Gg~~~rl~TaS~D~------t~k~wdlS~g~LL 211 (476)
T KOG0646|consen 169 IFSDHTLSITDLQIGSGGTNARLYTASEDR------TIKLWDLSLGVLL 211 (476)
T ss_pred eeccCcceeEEEEecCCCccceEEEecCCc------eEEEEEeccceee
Confidence 22 56777777665 35899999988 9999998866543
No 144
>KOG1034|consensus
Probab=99.27 E-value=4.7e-11 Score=83.51 Aligned_cols=70 Identities=21% Similarity=0.391 Sum_probs=61.2
Q ss_pred EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEe---cCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECC
Q psy7062 15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINC---EGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLS 87 (148)
Q Consensus 15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~---~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~ 87 (148)
+.+.+.|. ..++++++|.|.+|++|++++. ..+..+ .+|...|.+++|+++|..+++++.|..+++|+++
T Consensus 139 Neik~~p~-~~qlvls~SkD~svRlwnI~~~--~Cv~VfGG~egHrdeVLSvD~~~~gd~i~ScGmDhslk~W~l~ 211 (385)
T KOG1034|consen 139 NEIKFHPD-RPQLVLSASKDHSVRLWNIQTD--VCVAVFGGVEGHRDEVLSVDFSLDGDRIASCGMDHSLKLWRLN 211 (385)
T ss_pred hhhhcCCC-CCcEEEEecCCceEEEEeccCC--eEEEEecccccccCcEEEEEEcCCCCeeeccCCcceEEEEecC
Confidence 44555665 3689999999999999999998 777665 4699999999999999999999999999999998
No 145
>KOG4328|consensus
Probab=99.26 E-value=7.2e-11 Score=85.52 Aligned_cols=112 Identities=16% Similarity=0.213 Sum_probs=92.3
Q ss_pred cEEEEEeCCCCccEEEEEecCCeEEEEeCCC--CCCCceEEecCCCCCEEEEEEcc-CCCEEEEEeCCCcEEEEECCcc-
Q psy7062 14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGS--NNPNPVINCEGVSKNVVEVGFQE-DGKWMFTGGEDCRARIWDLSLC- 89 (148)
Q Consensus 14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~--~~~~~~~~~~~~~~~i~~~~~sp-~~~~l~~~~~~~~i~l~d~~~~- 89 (148)
..+++|+|.....++++|...|+|-+||+.+ +....+..+..|...|.++.|+| +...+++.+.||++++-|++..
T Consensus 189 it~l~fHPt~~~~lva~GdK~G~VG~Wn~~~~~~d~d~v~~f~~hs~~Vs~l~F~P~n~s~i~ssSyDGtiR~~D~~~~i 268 (498)
T KOG4328|consen 189 ITSLAFHPTENRKLVAVGDKGGQVGLWNFGTQEKDKDGVYLFTPHSGPVSGLKFSPANTSQIYSSSYDGTIRLQDFEGNI 268 (498)
T ss_pred eEEEEecccCcceEEEEccCCCcEEEEecCCCCCccCceEEeccCCccccceEecCCChhheeeeccCceeeeeeecchh
Confidence 5688899988789999999999999999962 22244667778999999999999 5678999999999999888654
Q ss_pred ----------------------------------cc------------------ccceEEEEcc-CCCEEEEEecCCcee
Q psy7062 90 ----------------------------------FI------------------QQVNALRITP-DKQLLASAEELSCCY 116 (148)
Q Consensus 90 ----------------------------------~~------------------~~i~~~~~sp-~~~~l~~~~~d~~~~ 116 (148)
|. ..|+.++++| ...+|++++.|+
T Consensus 269 ~e~v~s~~~d~~~fs~~d~~~e~~~vl~~~~~G~f~~iD~R~~~s~~~~~~lh~kKI~sv~~NP~~p~~laT~s~D~--- 345 (498)
T KOG4328|consen 269 SEEVLSLDTDNIWFSSLDFSAESRSVLFGDNVGNFNVIDLRTDGSEYENLRLHKKKITSVALNPVCPWFLATASLDQ--- 345 (498)
T ss_pred hHHHhhcCccceeeeeccccCCCccEEEeecccceEEEEeecCCccchhhhhhhcccceeecCCCCchheeecccCc---
Confidence 00 6788999999 566899999988
Q ss_pred cCeeEEEeecCCCcc
Q psy7062 117 CGAAVFVYNSCYPAA 131 (148)
Q Consensus 117 ~~~~i~~~d~~~~~~ 131 (148)
+.++||.+....
T Consensus 346 ---T~kIWD~R~l~~ 357 (498)
T KOG4328|consen 346 ---TAKIWDLRQLRG 357 (498)
T ss_pred ---ceeeeehhhhcC
Confidence 999999987653
No 146
>KOG2048|consensus
Probab=99.26 E-value=2.5e-10 Score=86.02 Aligned_cols=109 Identities=10% Similarity=0.099 Sum_probs=93.6
Q ss_pred cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----
Q psy7062 14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC---- 89 (148)
Q Consensus 14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~---- 89 (148)
...++|... +++ .+.+.+|+|.-||+.+. +++..+......|.+++.+|.+..++.|+.||.+..++....
T Consensus 72 IE~L~W~e~--~RL-FS~g~sg~i~EwDl~~l--k~~~~~d~~gg~IWsiai~p~~~~l~IgcddGvl~~~s~~p~~I~~ 146 (691)
T KOG2048|consen 72 IESLAWAEG--GRL-FSSGLSGSITEWDLHTL--KQKYNIDSNGGAIWSIAINPENTILAIGCDDGVLYDFSIGPDKITY 146 (691)
T ss_pred eeeEEEccC--CeE-EeecCCceEEEEecccC--ceeEEecCCCcceeEEEeCCccceEEeecCCceEEEEecCCceEEE
Confidence 468888843 445 55588999999999998 888888878899999999999999999999998888888766
Q ss_pred ---cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCccee
Q psy7062 90 ---FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVV 133 (148)
Q Consensus 90 ---~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~ 133 (148)
|. +++.++.|+|++..++.|+.|| .|++||........
T Consensus 147 ~r~l~rq~sRvLslsw~~~~~~i~~Gs~Dg------~Iriwd~~~~~t~~ 190 (691)
T KOG2048|consen 147 KRSLMRQKSRVLSLSWNPTGTKIAGGSIDG------VIRIWDVKSGQTLH 190 (691)
T ss_pred EeecccccceEEEEEecCCccEEEecccCc------eEEEEEcCCCceEE
Confidence 22 8999999999999999999999 99999998776655
No 147
>KOG0288|consensus
Probab=99.26 E-value=6.6e-11 Score=84.80 Aligned_cols=100 Identities=18% Similarity=0.247 Sum_probs=81.0
Q ss_pred EEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecC----CCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc---
Q psy7062 17 TVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEG----VSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC--- 89 (148)
Q Consensus 17 ~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~----~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~--- 89 (148)
...+....+.-+.+++.|.++.+.|+++. +....+.+ ..+.++.+.|||++.|+++|+.||.+++|++.++
T Consensus 345 tSl~ls~~g~~lLsssRDdtl~viDlRt~--eI~~~~sA~g~k~asDwtrvvfSpd~~YvaAGS~dgsv~iW~v~tgKlE 422 (459)
T KOG0288|consen 345 TSLDLSMDGLELLSSSRDDTLKVIDLRTK--EIRQTFSAEGFKCASDWTRVVFSPDGSYVAAGSADGSVYIWSVFTGKLE 422 (459)
T ss_pred eeEeeccCCeEEeeecCCCceeeeecccc--cEEEEeeccccccccccceeEECCCCceeeeccCCCcEEEEEccCceEE
Confidence 33343334666677699999999999998 65555543 2356889999999999999999999999999988
Q ss_pred --cc-----ccceEEEEccCCCEEEEEecCCceecCeeEEEe
Q psy7062 90 --FI-----QQVNALRITPDKQLLASAEELSCCYCGAAVFVY 124 (148)
Q Consensus 90 --~~-----~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~ 124 (148)
+. ..|.++.|+|.|..+++++.++ .+.+|
T Consensus 423 ~~l~~s~s~~aI~s~~W~~sG~~Llsadk~~------~v~lW 458 (459)
T KOG0288|consen 423 KVLSLSTSNAAITSLSWNPSGSGLLSADKQK------AVTLW 458 (459)
T ss_pred EEeccCCCCcceEEEEEcCCCchhhcccCCc------ceEec
Confidence 22 3699999999999999999877 78888
No 148
>KOG2111|consensus
Probab=99.26 E-value=3.4e-10 Score=78.92 Aligned_cols=109 Identities=14% Similarity=0.216 Sum_probs=86.8
Q ss_pred EEEEeCCCCccEEEEEe-cCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCc-EEEEECCcc----
Q psy7062 16 STVFDSKHLVEMVAALG-GYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCR-ARIWDLSLC---- 89 (148)
Q Consensus 16 ~~~~~~~~~~~~l~~~~-~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~-i~l~d~~~~---- 89 (148)
.++..|..+..+||.-+ .-|.|.+-|+.......-..+.+|.+.|.+++++-+|..++++|..|+ ||+||..++
T Consensus 139 lC~~~~~~~k~~LafPg~k~GqvQi~dL~~~~~~~p~~I~AH~s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~~g~~l~ 218 (346)
T KOG2111|consen 139 LCSLCPTSNKSLLAFPGFKTGQVQIVDLASTKPNAPSIINAHDSDIACVALNLQGTLVATASTKGTLIRIFDTEDGTLLQ 218 (346)
T ss_pred eEeecCCCCceEEEcCCCccceEEEEEhhhcCcCCceEEEcccCceeEEEEcCCccEEEEeccCcEEEEEEEcCCCcEee
Confidence 44555655556665533 346899999987622223567789999999999999999999999997 789999998
Q ss_pred -cc-----ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062 90 -FI-----QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA 130 (148)
Q Consensus 90 -~~-----~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~ 130 (148)
|. ..+++++|||+..+|+++++.| +++++.++...
T Consensus 219 E~RRG~d~A~iy~iaFSp~~s~LavsSdKg------TlHiF~l~~~~ 259 (346)
T KOG2111|consen 219 ELRRGVDRADIYCIAFSPNSSWLAVSSDKG------TLHIFSLRDTE 259 (346)
T ss_pred eeecCCchheEEEEEeCCCccEEEEEcCCC------eEEEEEeecCC
Confidence 32 7899999999999999999977 99999987543
No 149
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=99.25 E-value=3.6e-10 Score=79.42 Aligned_cols=99 Identities=12% Similarity=0.111 Sum_probs=77.1
Q ss_pred cEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEE-EEEeCCCcEEEEECCcc-----cc--ccceEE
Q psy7062 26 EMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWM-FTGGEDCRARIWDLSLC-----FI--QQVNAL 97 (148)
Q Consensus 26 ~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l-~~~~~~~~i~l~d~~~~-----~~--~~i~~~ 97 (148)
.++++++.|+.+++||++++ +.+..+..+. .+..++|+|+++.+ ++++.++.+++||..++ +. ..+..+
T Consensus 2 ~~~~s~~~d~~v~~~d~~t~--~~~~~~~~~~-~~~~l~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~ 78 (300)
T TIGR03866 2 KAYVSNEKDNTISVIDTATL--EVTRTFPVGQ-RPRGITLSKDGKLLYVCASDSDTIQVIDLATGEVIGTLPSGPDPELF 78 (300)
T ss_pred cEEEEecCCCEEEEEECCCC--ceEEEEECCC-CCCceEECCCCCEEEEEECCCCeEEEEECCCCcEEEeccCCCCccEE
Confidence 57888899999999999987 6777776543 36679999999976 56677899999999876 22 446778
Q ss_pred EEccCCCEEEEEe-cCCceecCeeEEEeecCCCccee
Q psy7062 98 RITPDKQLLASAE-ELSCCYCGAAVFVYNSCYPAAVV 133 (148)
Q Consensus 98 ~~sp~~~~l~~~~-~d~~~~~~~~i~~~d~~~~~~~~ 133 (148)
.|+|+++.+++++ .++ .+++||+++.+...
T Consensus 79 ~~~~~g~~l~~~~~~~~------~l~~~d~~~~~~~~ 109 (300)
T TIGR03866 79 ALHPNGKILYIANEDDN------LVTVIDIETRKVLA 109 (300)
T ss_pred EECCCCCEEEEEcCCCC------eEEEEECCCCeEEe
Confidence 9999999776654 445 89999998755443
No 150
>KOG4378|consensus
Probab=99.25 E-value=1.9e-11 Score=89.62 Aligned_cols=112 Identities=15% Similarity=0.164 Sum_probs=92.6
Q ss_pred eCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----cc---
Q psy7062 20 DSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-----FI--- 91 (148)
Q Consensus 20 ~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-----~~--- 91 (148)
+......++++|+..+.|++||++.+ ...+.+++|++.|+++.++-...++++++..|.|.+..+.+. |.
T Consensus 86 ~~~s~S~y~~sgG~~~~Vkiwdl~~k--l~hr~lkdh~stvt~v~YN~~DeyiAsvs~gGdiiih~~~t~~~tt~f~~~s 163 (673)
T KOG4378|consen 86 ACASQSLYEISGGQSGCVKIWDLRAK--LIHRFLKDHQSTVTYVDYNNTDEYIASVSDGGDIIIHGTKTKQKTTTFTIDS 163 (673)
T ss_pred hhhhcceeeeccCcCceeeehhhHHH--HHhhhccCCcceeEEEEecCCcceeEEeccCCcEEEEecccCccccceecCC
Confidence 33334689999999999999999976 677888999999999999999999999999999999999887 44
Q ss_pred -ccceEEEEccCCC-EEEEEecCCceecCeeEEEeecCCCcceeccCccc
Q psy7062 92 -QQVNALRITPDKQ-LLASAEELSCCYCGAAVFVYNSCYPAAVVASNTLV 139 (148)
Q Consensus 92 -~~i~~~~~sp~~~-~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~~~~~ 139 (148)
+.++.+.|+|..+ +|.+++.+| .|.+||+....++..+.+.+
T Consensus 164 gqsvRll~ys~skr~lL~~asd~G------~VtlwDv~g~sp~~~~~~~H 207 (673)
T KOG4378|consen 164 GQSVRLLRYSPSKRFLLSIASDKG------AVTLWDVQGMSPIFHASEAH 207 (673)
T ss_pred CCeEEEeecccccceeeEeeccCC------eEEEEeccCCCcccchhhhc
Confidence 5677899999776 555667766 89999999777766554443
No 151
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=99.25 E-value=6e-10 Score=78.31 Aligned_cols=114 Identities=17% Similarity=0.145 Sum_probs=82.2
Q ss_pred cEEEEEeCCCCccEEE-EEecCCeEEEEeCCCCCCCceEEecCCC-------CCEEEEEEccCCCEEEE-EeCCCcEEEE
Q psy7062 14 QISTVFDSKHLVEMVA-ALGGYQHIRMYDFGSNNPNPVINCEGVS-------KNVVEVGFQEDGKWMFT-GGEDCRARIW 84 (148)
Q Consensus 14 ~~~~~~~~~~~~~~l~-~~~~d~~v~~~d~~~~~~~~~~~~~~~~-------~~i~~~~~sp~~~~l~~-~~~~~~i~l~ 84 (148)
...++|+++ ++.|+ ++..++.+.+||++++ +.+..+..+. .....++++|+++.++. ...++.+.+|
T Consensus 159 ~~~~~~s~d--g~~l~~~~~~~~~v~i~d~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~~~~~~~~~~~i~v~ 234 (300)
T TIGR03866 159 PRFAEFTAD--GKELWVSSEIGGTVSVIDVATR--KVIKKITFEIPGVHPEAVQPVGIKLTKDGKTAFVALGPANRVAVV 234 (300)
T ss_pred ccEEEECCC--CCEEEEEcCCCCEEEEEEcCcc--eeeeeeeecccccccccCCccceEECCCCCEEEEEcCCCCeEEEE
Confidence 345677777 66664 4345889999999987 5555443211 12356889999997644 4456789999
Q ss_pred ECCcc-----cc--ccceEEEEccCCCEEEEEe-cCCceecCeeEEEeecCCCcceeccCc
Q psy7062 85 DLSLC-----FI--QQVNALRITPDKQLLASAE-ELSCCYCGAAVFVYNSCYPAAVVASNT 137 (148)
Q Consensus 85 d~~~~-----~~--~~i~~~~~sp~~~~l~~~~-~d~~~~~~~~i~~~d~~~~~~~~~~~~ 137 (148)
|.++. +. ..+.++.|+|++++|++++ .++ .|.+||..+.+.+..++.
T Consensus 235 d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~------~i~v~d~~~~~~~~~~~~ 289 (300)
T TIGR03866 235 DAKTYEVLDYLLVGQRVWQLAFTPDEKYLLTTNGVSN------DVSVIDVAALKVIKSIKV 289 (300)
T ss_pred ECCCCcEEEEEEeCCCcceEEECCCCCEEEEEcCCCC------eEEEEECCCCcEEEEEEc
Confidence 99876 22 6788999999999988875 455 899999998877666543
No 152
>KOG0299|consensus
Probab=99.24 E-value=1.1e-10 Score=84.51 Aligned_cols=105 Identities=12% Similarity=0.235 Sum_probs=85.0
Q ss_pred EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----
Q psy7062 15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC----- 89 (148)
Q Consensus 15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~----- 89 (148)
.+++.+++ +.+|++|+.|..+.+|+.++. +.+..+.+|...|.+++|-....-+++++.|..+++|++...
T Consensus 206 l~~avS~D--gkylatgg~d~~v~Iw~~~t~--ehv~~~~ghr~~V~~L~fr~gt~~lys~s~Drsvkvw~~~~~s~vet 281 (479)
T KOG0299|consen 206 LTLAVSSD--GKYLATGGRDRHVQIWDCDTL--EHVKVFKGHRGAVSSLAFRKGTSELYSASADRSVKVWSIDQLSYVET 281 (479)
T ss_pred EEEEEcCC--CcEEEecCCCceEEEecCccc--chhhcccccccceeeeeeecCccceeeeecCCceEEEehhHhHHHHH
Confidence 34455555 999999999999999999999 899999999999999999999999999999999999999876
Q ss_pred -cc--ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCC
Q psy7062 90 -FI--QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYP 129 (148)
Q Consensus 90 -~~--~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~ 129 (148)
|. ..|..+.-...++.+.+++.|+ ++++|+++..
T Consensus 282 lyGHqd~v~~IdaL~reR~vtVGgrDr------T~rlwKi~ee 318 (479)
T KOG0299|consen 282 LYGHQDGVLGIDALSRERCVTVGGRDR------TVRLWKIPEE 318 (479)
T ss_pred HhCCccceeeechhcccceEEeccccc------eeEEEecccc
Confidence 22 5565555555566666666777 7778877543
No 153
>KOG1539|consensus
Probab=99.24 E-value=4e-10 Score=86.83 Aligned_cols=120 Identities=13% Similarity=0.202 Sum_probs=97.7
Q ss_pred eeeecCc-EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEEC
Q psy7062 8 ILTAFGQ-ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDL 86 (148)
Q Consensus 8 ~~~~~~~-~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~ 86 (148)
+++..+. ....++|+..=+-++.|+.+|.+.+|+++++ +.+.+++.+...|+++.-+|--..++.|..+|+|.++++
T Consensus 154 ~~~~~~~~Ital~HP~TYLNKIvvGs~~G~lql~Nvrt~--K~v~~f~~~~s~IT~ieqsPaLDVVaiG~~~G~ViifNl 231 (910)
T KOG1539|consen 154 FLKVEGDFITALLHPSTYLNKIVVGSSQGRLQLWNVRTG--KVVYTFQEFFSRITAIEQSPALDVVAIGLENGTVIIFNL 231 (910)
T ss_pred eeeccCCceeeEecchhheeeEEEeecCCcEEEEEeccC--cEEEEecccccceeEeccCCcceEEEEeccCceEEEEEc
Confidence 3444444 3344567666666778899999999999999 999999999999999999999999999999999999999
Q ss_pred Ccc-----cc---ccceEEEEccCCC-EEEEEecCCceecCeeEEEeecCCCcceecc
Q psy7062 87 SLC-----FI---QQVNALRITPDKQ-LLASAEELSCCYCGAAVFVYNSCYPAAVVAS 135 (148)
Q Consensus 87 ~~~-----~~---~~i~~~~~sp~~~-~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~ 135 (148)
+.. |+ ++|.+++|.-||+ .+++++..| .+.+||+...+.+...
T Consensus 232 K~dkil~sFk~d~g~VtslSFrtDG~p~las~~~~G------~m~~wDLe~kkl~~v~ 283 (910)
T KOG1539|consen 232 KFDKILMSFKQDWGRVTSLSFRTDGNPLLASGRSNG------DMAFWDLEKKKLINVT 283 (910)
T ss_pred ccCcEEEEEEccccceeEEEeccCCCeeEEeccCCc------eEEEEEcCCCeeeeee
Confidence 987 44 8899999999887 555555545 8999999876654433
No 154
>KOG0307|consensus
Probab=99.24 E-value=1.6e-11 Score=96.66 Aligned_cols=115 Identities=17% Similarity=0.210 Sum_probs=91.3
Q ss_pred EEEEEeCCCCc--cEEEEEecCCeEEEEeCCC----CCCCceEEecCCCCCEEEEEEccCC-CEEEEEeCCCcEEEEECC
Q psy7062 15 ISTVFDSKHLV--EMVAALGGYQHIRMYDFGS----NNPNPVINCEGVSKNVVEVGFQEDG-KWMFTGGEDCRARIWDLS 87 (148)
Q Consensus 15 ~~~~~~~~~~~--~~l~~~~~d~~v~~~d~~~----~~~~~~~~~~~~~~~i~~~~~sp~~-~~l~~~~~~~~i~l~d~~ 87 (148)
..++|.+...+ .+++.|.+||.|.+||... ...+.+.+...|++.|.+++|++.+ +++++|+.+|.|.+||++
T Consensus 68 ~kL~W~~~g~~~~GlIaGG~edG~I~ly~p~~~~~~~~~~~la~~~~h~G~V~gLDfN~~q~nlLASGa~~geI~iWDln 147 (1049)
T KOG0307|consen 68 NKLAWGSYGSHSHGLIAGGLEDGNIVLYDPASIIANASEEVLATKSKHTGPVLGLDFNPFQGNLLASGADDGEILIWDLN 147 (1049)
T ss_pred eeeeecccCCCccceeeccccCCceEEecchhhccCcchHHHhhhcccCCceeeeeccccCCceeeccCCCCcEEEeccC
Confidence 56778754333 4799999999999999875 1123567778899999999999955 599999999999999998
Q ss_pred cc---cc-------ccceEEEEcc-CCCEEEEEecCCceecCeeEEEeecCCCcceecc
Q psy7062 88 LC---FI-------QQVNALRITP-DKQLLASAEELSCCYCGAAVFVYNSCYPAAVVAS 135 (148)
Q Consensus 88 ~~---~~-------~~i~~~~~sp-~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~ 135 (148)
+. +. ..|.+++|+. ..+.|++++.+| ++.|||++..+++...
T Consensus 148 n~~tP~~~~~~~~~~eI~~lsWNrkvqhILAS~s~sg------~~~iWDlr~~~pii~l 200 (1049)
T KOG0307|consen 148 KPETPFTPGSQAPPSEIKCLSWNRKVSHILASGSPSG------RAVIWDLRKKKPIIKL 200 (1049)
T ss_pred CcCCCCCCCCCCCcccceEeccchhhhHHhhccCCCC------CceeccccCCCccccc
Confidence 76 21 7899999987 456788888866 8999999977665444
No 155
>KOG1408|consensus
Probab=99.22 E-value=3.2e-10 Score=86.53 Aligned_cols=100 Identities=18% Similarity=0.239 Sum_probs=88.1
Q ss_pred CCCCccEEEEEecCCeEEEEeCCCCCCCceEEecC---CCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc------cc
Q psy7062 21 SKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEG---VSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC------FI 91 (148)
Q Consensus 21 ~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~---~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~------~~ 91 (148)
-++..+++++++.|+.|++||++++ +..+.|++ |.+....+...|.|.++++.+.|.++.++|.-++ +.
T Consensus 604 Vdp~~k~v~t~cQDrnirif~i~sg--Kq~k~FKgs~~~eG~lIKv~lDPSgiY~atScsdktl~~~Df~sgEcvA~m~G 681 (1080)
T KOG1408|consen 604 VDPTSKLVVTVCQDRNIRIFDIESG--KQVKSFKGSRDHEGDLIKVILDPSGIYLATSCSDKTLCFVDFVSGECVAQMTG 681 (1080)
T ss_pred eCCCcceEEEEecccceEEEecccc--ceeeeecccccCCCceEEEEECCCccEEEEeecCCceEEEEeccchhhhhhcC
Confidence 3344899999999999999999999 78888875 5567788899999999999999999999999988 22
Q ss_pred --ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCC
Q psy7062 92 --QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCY 128 (148)
Q Consensus 92 --~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~ 128 (148)
..++.+.|.+|.++|++.+.|| .|.+|.++.
T Consensus 682 HsE~VTG~kF~nDCkHlISvsgDg------CIFvW~lp~ 714 (1080)
T KOG1408|consen 682 HSEAVTGVKFLNDCKHLISVSGDG------CIFVWKLPL 714 (1080)
T ss_pred cchheeeeeecccchhheeecCCc------eEEEEECch
Confidence 6789999999999999999999 999999763
No 156
>KOG2445|consensus
Probab=99.22 E-value=7.1e-10 Score=77.13 Aligned_cols=110 Identities=17% Similarity=0.183 Sum_probs=88.5
Q ss_pred cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCC--CCceEEecCCCCCEEEEEEcc--CCCEEEEEeCCCcEEEEECCcc
Q psy7062 14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNN--PNPVINCEGVSKNVVEVGFQE--DGKWMFTGGEDCRARIWDLSLC 89 (148)
Q Consensus 14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~--~~~~~~~~~~~~~i~~~~~sp--~~~~l~~~~~~~~i~l~d~~~~ 89 (148)
..++.||+. |+.+|+|+.|+++++||.+... .......+.|.+.|..+.|.+ -|+.+++++.|+++.+|.-...
T Consensus 16 ihdVs~D~~--GRRmAtCSsDq~vkI~d~~~~s~~W~~Ts~Wrah~~Si~rV~WAhPEfGqvvA~cS~Drtv~iWEE~~~ 93 (361)
T KOG2445|consen 16 IHDVSFDFY--GRRMATCSSDQTVKIWDSTSDSGTWSCTSSWRAHDGSIWRVVWAHPEFGQVVATCSYDRTVSIWEEQEK 93 (361)
T ss_pred eeeeeeccc--CceeeeccCCCcEEEEeccCCCCceEEeeeEEecCCcEEEEEecCccccceEEEEecCCceeeeeeccc
Confidence 567888887 9999999999999999975432 234456778999999999964 4889999999999999976322
Q ss_pred --------------cc---ccceEEEEcc--CCCEEEEEecCCceecCeeEEEeecCCCcc
Q psy7062 90 --------------FI---QQVNALRITP--DKQLLASAEELSCCYCGAAVFVYNSCYPAA 131 (148)
Q Consensus 90 --------------~~---~~i~~~~~sp--~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~ 131 (148)
+. ..+..+.|.| -|-.|++++.|| .+++|+...+..
T Consensus 94 ~~~~~~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG------~lRIYEA~dp~n 148 (361)
T KOG2445|consen 94 SEEAHGRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASADG------ILRIYEAPDPMN 148 (361)
T ss_pred ccccccceeEEEEEeecCCcceeEEEecchhcceEEEEeccCc------EEEEEecCCccc
Confidence 11 7899999999 567899999999 999998765543
No 157
>KOG0301|consensus
Probab=99.21 E-value=1.8e-10 Score=87.06 Aligned_cols=107 Identities=15% Similarity=0.234 Sum_probs=86.5
Q ss_pred eecCcEEEEEeC-CCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCc
Q psy7062 10 TAFGQISTVFDS-KHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSL 88 (148)
Q Consensus 10 ~~~~~~~~~~~~-~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~ 88 (148)
..++|.+.+|.. .-..+.+++||.|.+|++|.-. +.++++.+|+..|.++++-+++ .++++++||.|++|++..
T Consensus 135 ~l~gH~asVWAv~~l~e~~~vTgsaDKtIklWk~~----~~l~tf~gHtD~VRgL~vl~~~-~flScsNDg~Ir~w~~~g 209 (745)
T KOG0301|consen 135 SLQGHTASVWAVASLPENTYVTGSADKTIKLWKGG----TLLKTFSGHTDCVRGLAVLDDS-HFLSCSNDGSIRLWDLDG 209 (745)
T ss_pred ccCCcchheeeeeecCCCcEEeccCcceeeeccCC----chhhhhccchhheeeeEEecCC-CeEeecCCceEEEEeccC
Confidence 356777777761 1114488999999999999884 5689999999999999998854 478999999999999954
Q ss_pred c--cc-----ccceEEEEccCCCEEEEEecCCceecCeeEEEeecC
Q psy7062 89 C--FI-----QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSC 127 (148)
Q Consensus 89 ~--~~-----~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~ 127 (148)
. ++ .-+.++....+.+.++++++|+ ++++|+..
T Consensus 210 e~l~~~~ghtn~vYsis~~~~~~~Ivs~gEDr------tlriW~~~ 249 (745)
T KOG0301|consen 210 EVLLEMHGHTNFVYSISMALSDGLIVSTGEDR------TLRIWKKD 249 (745)
T ss_pred ceeeeeeccceEEEEEEecCCCCeEEEecCCc------eEEEeecC
Confidence 4 22 6678888778889999999999 99999865
No 158
>KOG1009|consensus
Probab=99.21 E-value=5.3e-11 Score=85.06 Aligned_cols=98 Identities=17% Similarity=0.275 Sum_probs=83.6
Q ss_pred cEEEEEeCCCCccEEEEEecCCeEEEEeCC--------C-----C-CCCceEEecCCCCCEEEEEEccCCCEEEEEeCCC
Q psy7062 14 QISTVFDSKHLVEMVAALGGYQHIRMYDFG--------S-----N-NPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDC 79 (148)
Q Consensus 14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~--------~-----~-~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~ 79 (148)
.+++-|+++ |++|++|++++.+.+|... + + .......+.+|...|..++|+|++.++++++.|+
T Consensus 68 VN~vRf~p~--gelLASg~D~g~v~lWk~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~d~~~l~s~s~dn 145 (434)
T KOG1009|consen 68 VNVVRFSPD--GELLASGGDGGEVFLWKQGDVRIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAWSPDSNFLVSGSVDN 145 (434)
T ss_pred eEEEEEcCC--cCeeeecCCCceEEEEEecCcCCccccchhhhCccceEEEEEecccccchhhhhccCCCceeeeeeccc
Confidence 578888888 9999999999999999877 2 1 0122355678999999999999999999999999
Q ss_pred cEEEEECCcc-----cc---ccceEEEEccCCCEEEEEecCC
Q psy7062 80 RARIWDLSLC-----FI---QQVNALRITPDKQLLASAEELS 113 (148)
Q Consensus 80 ~i~l~d~~~~-----~~---~~i~~~~~sp~~~~l~~~~~d~ 113 (148)
.+++||+..+ +. ..++.++|.|.++++++-+.|+
T Consensus 146 s~~l~Dv~~G~l~~~~~dh~~yvqgvawDpl~qyv~s~s~dr 187 (434)
T KOG1009|consen 146 SVRLWDVHAGQLLAILDDHEHYVQGVAWDPLNQYVASKSSDR 187 (434)
T ss_pred eEEEEEeccceeEeeccccccccceeecchhhhhhhhhccCc
Confidence 9999999998 21 7789999999999999988877
No 159
>KOG2919|consensus
Probab=99.20 E-value=4.7e-10 Score=78.60 Aligned_cols=109 Identities=20% Similarity=0.291 Sum_probs=89.0
Q ss_pred cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeC-CCcEEEEECCcc---
Q psy7062 14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGE-DCRARIWDLSLC--- 89 (148)
Q Consensus 14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~-~~~i~l~d~~~~--- 89 (148)
..+++|+|.. ..+++.++....+-+|.-... +++..+-+|...|+.+.|+++|+.+++|.+ +..|..||++..
T Consensus 210 isc~a~sP~~-~~~~a~gsY~q~~giy~~~~~--~pl~llggh~gGvThL~~~edGn~lfsGaRk~dkIl~WDiR~~~~p 286 (406)
T KOG2919|consen 210 ISCFAFSPMD-SKTLAVGSYGQRVGIYNDDGR--RPLQLLGGHGGGVTHLQWCEDGNKLFSGARKDDKILCWDIRYSRDP 286 (406)
T ss_pred eeeeeccCCC-CcceeeecccceeeeEecCCC--CceeeecccCCCeeeEEeccCcCeecccccCCCeEEEEeehhccch
Confidence 4677888764 678899888889999888877 888888899999999999999999999875 679999999876
Q ss_pred ---cc------ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcc
Q psy7062 90 ---FI------QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAA 131 (148)
Q Consensus 90 ---~~------~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~ 131 (148)
+. ..---+...|++++|++|+.|| .|++||+..+..
T Consensus 287 v~~L~rhv~~TNQRI~FDld~~~~~LasG~tdG------~V~vwdlk~~gn 331 (406)
T KOG2919|consen 287 VYALERHVGDTNQRILFDLDPKGEILASGDTDG------SVRVWDLKDLGN 331 (406)
T ss_pred hhhhhhhccCccceEEEecCCCCceeeccCCCc------cEEEEecCCCCC
Confidence 22 2222345568999999999988 999999987543
No 160
>KOG1310|consensus
Probab=99.20 E-value=2.4e-10 Score=84.86 Aligned_cols=107 Identities=17% Similarity=0.257 Sum_probs=90.3
Q ss_pred cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEe-cCCCCCEEEEEEcc--CCCEEEEEeCCCcEEEEECCcc-
Q psy7062 14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINC-EGVSKNVVEVGFQE--DGKWMFTGGEDCRARIWDLSLC- 89 (148)
Q Consensus 14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~-~~~~~~i~~~~~sp--~~~~l~~~~~~~~i~l~d~~~~- 89 (148)
.+++.|..+ |.+|++|++|-.+.+||.-.. +.+..+ .+|+..|.+++|-| +.+.+++|..|..|++||+.+.
T Consensus 53 VN~LeWn~d--G~lL~SGSDD~r~ivWd~~~~--KllhsI~TgHtaNIFsvKFvP~tnnriv~sgAgDk~i~lfdl~~~~ 128 (758)
T KOG1310|consen 53 VNCLEWNAD--GELLASGSDDTRLIVWDPFEY--KLLHSISTGHTANIFSVKFVPYTNNRIVLSGAGDKLIKLFDLDSSK 128 (758)
T ss_pred ecceeecCC--CCEEeecCCcceEEeecchhc--ceeeeeecccccceeEEeeeccCCCeEEEeccCcceEEEEeccccc
Confidence 467788877 999999999999999999876 666555 47999999999999 4558899999999999999853
Q ss_pred --------------cc---ccceEEEEccCC-CEEEEEecCCceecCeeEEEeecCCCc
Q psy7062 90 --------------FI---QQVNALRITPDK-QLLASAEELSCCYCGAAVFVYNSCYPA 130 (148)
Q Consensus 90 --------------~~---~~i~~~~~sp~~-~~l~~~~~d~~~~~~~~i~~~d~~~~~ 130 (148)
+. .++..++-.|++ ..+.++++|| +|+-+|++.+.
T Consensus 129 ~~~~d~~~~~~~~~~~cht~rVKria~~p~~PhtfwsasEDG------tirQyDiREph 181 (758)
T KOG1310|consen 129 EGGMDHGMEETTRCWSCHTDRVKRIATAPNGPHTFWSASEDG------TIRQYDIREPH 181 (758)
T ss_pred ccccccCccchhhhhhhhhhhhhheecCCCCCceEEEecCCc------ceeeecccCCc
Confidence 11 777888888977 7899999999 99999998754
No 161
>KOG0299|consensus
Probab=99.20 E-value=2.1e-10 Score=83.18 Aligned_cols=110 Identities=23% Similarity=0.293 Sum_probs=89.5
Q ss_pred EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCC--c-------------eEEe-cCCCCCEEEEEEccCCCEEEEEeCC
Q psy7062 15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPN--P-------------VINC-EGVSKNVVEVGFQEDGKWMFTGGED 78 (148)
Q Consensus 15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~--~-------------~~~~-~~~~~~i~~~~~sp~~~~l~~~~~~ 78 (148)
.++++.++ ..+..+++.+++|.-|++.+++.. . ...- ++|...+.++++++||+++++|+.|
T Consensus 146 ~~vals~d--~~~~fsask~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~keil~~avS~Dgkylatgg~d 223 (479)
T KOG0299|consen 146 TSVALSPD--DKRVFSASKDGTILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHVKEILTLAVSSDGKYLATGGRD 223 (479)
T ss_pred eEEEeecc--ccceeecCCCcceeeeehhcCcccccccccchhhhhccCCCCcccccccceeEEEEEcCCCcEEEecCCC
Confidence 45555565 788899999999999999887311 0 0011 2677889999999999999999999
Q ss_pred CcEEEEECCcc-----cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcce
Q psy7062 79 CRARIWDLSLC-----FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAV 132 (148)
Q Consensus 79 ~~i~l~d~~~~-----~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~ 132 (148)
..+++||.++. |. ..|.+++|-.+...|.+++.|+ .|++|++.....+
T Consensus 224 ~~v~Iw~~~t~ehv~~~~ghr~~V~~L~fr~gt~~lys~s~Dr------svkvw~~~~~s~v 279 (479)
T KOG0299|consen 224 RHVQIWDCDTLEHVKVFKGHRGAVSSLAFRKGTSELYSASADR------SVKVWSIDQLSYV 279 (479)
T ss_pred ceEEEecCcccchhhcccccccceeeeeeecCccceeeeecCC------ceEEEehhHhHHH
Confidence 99999999988 44 8899999998889999999988 9999998755443
No 162
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=99.19 E-value=2.8e-09 Score=71.45 Aligned_cols=115 Identities=14% Similarity=0.184 Sum_probs=76.9
Q ss_pred EEEEEeCCCCccEEEEEec----------CCeEEEEeCCCCCCCceEEecC-CCCCEEEEEEccCCCEEEE--EeCCCcE
Q psy7062 15 ISTVFDSKHLVEMVAALGG----------YQHIRMYDFGSNNPNPVINCEG-VSKNVVEVGFQEDGKWMFT--GGEDCRA 81 (148)
Q Consensus 15 ~~~~~~~~~~~~~l~~~~~----------d~~v~~~d~~~~~~~~~~~~~~-~~~~i~~~~~sp~~~~l~~--~~~~~~i 81 (148)
..+.|+++ |+.|+.-.. -+...+|.++... .....+.. ....|..++|+|+|+.++. |..+..+
T Consensus 9 ~~~~W~~~--G~~l~~~~~~~~~~~~ks~~~~~~l~~~~~~~-~~~~~i~l~~~~~I~~~~WsP~g~~favi~g~~~~~v 85 (194)
T PF08662_consen 9 AKLHWQPS--GDYLLVKVQTRVDKSGKSYYGEFELFYLNEKN-IPVESIELKKEGPIHDVAWSPNGNEFAVIYGSMPAKV 85 (194)
T ss_pred EEEEeccc--CCEEEEEEEEeeccCcceEEeeEEEEEEecCC-CccceeeccCCCceEEEEECcCCCEEEEEEccCCccc
Confidence 34455665 555554333 1246666664431 23444432 3446999999999997654 4456799
Q ss_pred EEEECCcc----cc-ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceecc
Q psy7062 82 RIWDLSLC----FI-QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVAS 135 (148)
Q Consensus 82 ~l~d~~~~----~~-~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~ 135 (148)
.+||++.. +. ..+..+.|+|+|++|++++.+. ..+.+.+||.++.+.+...
T Consensus 86 ~lyd~~~~~i~~~~~~~~n~i~wsP~G~~l~~~g~~n---~~G~l~~wd~~~~~~i~~~ 141 (194)
T PF08662_consen 86 TLYDVKGKKIFSFGTQPRNTISWSPDGRFLVLAGFGN---LNGDLEFWDVRKKKKISTF 141 (194)
T ss_pred EEEcCcccEeEeecCCCceEEEECCCCCEEEEEEccC---CCcEEEEEECCCCEEeecc
Confidence 99999855 33 6788999999999999987543 2347999999866665443
No 163
>KOG1273|consensus
Probab=99.19 E-value=1.2e-10 Score=81.36 Aligned_cols=68 Identities=13% Similarity=0.202 Sum_probs=61.8
Q ss_pred EEEEEEccCCCEEEEEeCCCcEEEEECCcc-----cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcc
Q psy7062 60 VVEVGFQEDGKWMFTGGEDCRARIWDLSLC-----FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAA 131 (148)
Q Consensus 60 i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-----~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~ 131 (148)
..++.|++.|.+++.|+.+|.+.+||+.+. |. .+|.+++||++|++|+++++|- .|.+||+..+..
T Consensus 26 a~~~~Fs~~G~~lAvGc~nG~vvI~D~~T~~iar~lsaH~~pi~sl~WS~dgr~LltsS~D~------si~lwDl~~gs~ 99 (405)
T KOG1273|consen 26 AECCQFSRWGDYLAVGCANGRVVIYDFDTFRIARMLSAHVRPITSLCWSRDGRKLLTSSRDW------SIKLWDLLKGSP 99 (405)
T ss_pred cceEEeccCcceeeeeccCCcEEEEEccccchhhhhhccccceeEEEecCCCCEeeeecCCc------eeEEEeccCCCc
Confidence 678999999999999999999999999887 43 8999999999999999999988 999999988775
Q ss_pred ee
Q psy7062 132 VV 133 (148)
Q Consensus 132 ~~ 133 (148)
..
T Consensus 100 l~ 101 (405)
T KOG1273|consen 100 LK 101 (405)
T ss_pred ee
Confidence 43
No 164
>KOG2096|consensus
Probab=99.17 E-value=5.7e-10 Score=78.12 Aligned_cols=119 Identities=15% Similarity=0.197 Sum_probs=89.9
Q ss_pred EEEEEeCCCCccEEEEEecCCeEEEEeCCCCC------CCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCc
Q psy7062 15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNN------PNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSL 88 (148)
Q Consensus 15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~------~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~ 88 (148)
..++.+|+ |+++++++-.-.+++|.+--.+ ......+++|.+.|..++|||+..-+++.+.||++++||+.-
T Consensus 232 ~~aavSP~--GRFia~~gFTpDVkVwE~~f~kdG~fqev~rvf~LkGH~saV~~~aFsn~S~r~vtvSkDG~wriwdtdV 309 (420)
T KOG2096|consen 232 YDAAVSPD--GRFIAVSGFTPDVKVWEPIFTKDGTFQEVKRVFSLKGHQSAVLAAAFSNSSTRAVTVSKDGKWRIWDTDV 309 (420)
T ss_pred cceeeCCC--CcEEEEecCCCCceEEEEEeccCcchhhhhhhheeccchhheeeeeeCCCcceeEEEecCCcEEEeeccc
Confidence 34556677 9999998877899999874211 124567889999999999999999999999999999999965
Q ss_pred c---------cc----------ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceeccCcccCcc
Q psy7062 89 C---------FI----------QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVASNTLVKPQ 142 (148)
Q Consensus 89 ~---------~~----------~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~ 142 (148)
. +. +....+..+|+|+.|+.+.. ..++++..+..+.....+..+...
T Consensus 310 rY~~~qDpk~Lk~g~~pl~aag~~p~RL~lsP~g~~lA~s~g-------s~l~~~~se~g~~~~~~e~~h~~~ 375 (420)
T KOG2096|consen 310 RYEAGQDPKILKEGSAPLHAAGSEPVRLELSPSGDSLAVSFG-------SDLKVFASEDGKDYPELEDIHSTT 375 (420)
T ss_pred eEecCCCchHhhcCCcchhhcCCCceEEEeCCCCcEEEeecC-------CceEEEEcccCccchhHHHhhcCc
Confidence 4 11 55668999999999888764 268899887765544444433333
No 165
>KOG2919|consensus
Probab=99.16 E-value=4e-10 Score=78.95 Aligned_cols=126 Identities=21% Similarity=0.203 Sum_probs=90.2
Q ss_pred cCcEEEEEeCCCCccEEEEEecCCeEEEEeC-CCCCCCceEEec-----CCCCCEEEEEEcc-CCCEEEEEeCCCcEEEE
Q psy7062 12 FGQISTVFDSKHLVEMVAALGGYQHIRMYDF-GSNNPNPVINCE-----GVSKNVVEVGFQE-DGKWMFTGGEDCRARIW 84 (148)
Q Consensus 12 ~~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~-~~~~~~~~~~~~-----~~~~~i~~~~~sp-~~~~l~~~~~~~~i~l~ 84 (148)
.+..+++|+++ |+.|.+ +..+.|++||+ +.+.-..+..-. +..+.+.+++++| +.+.++.++....+=|+
T Consensus 159 taAhsL~Fs~D--Geqlfa-GykrcirvFdt~RpGr~c~vy~t~~~~k~gq~giisc~a~sP~~~~~~a~gsY~q~~giy 235 (406)
T KOG2919|consen 159 TAAHSLQFSPD--GEQLFA-GYKRCIRVFDTSRPGRDCPVYTTVTKGKFGQKGIISCFAFSPMDSKTLAVGSYGQRVGIY 235 (406)
T ss_pred hhheeEEecCC--CCeEee-cccceEEEeeccCCCCCCcchhhhhcccccccceeeeeeccCCCCcceeeecccceeeeE
Confidence 35578999998 889888 77899999999 444212222221 2367789999999 55588899988887777
Q ss_pred ECCcc--cc------ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcc-eeccCcccCcceee
Q psy7062 85 DLSLC--FI------QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAA-VVASNTLVKPQVTR 145 (148)
Q Consensus 85 d~~~~--~~------~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~-~~~~~~~~~~~~~~ 145 (148)
.-..+ +. +.|+.++|.++|..|++|.+ ....|..||++.... +..++..+.-.-.|
T Consensus 236 ~~~~~~pl~llggh~gGvThL~~~edGn~lfsGaR-----k~dkIl~WDiR~~~~pv~~L~rhv~~TNQR 300 (406)
T KOG2919|consen 236 NDDGRRPLQLLGGHGGGVTHLQWCEDGNKLFSGAR-----KDDKILCWDIRYSRDPVYALERHVGDTNQR 300 (406)
T ss_pred ecCCCCceeeecccCCCeeeEEeccCcCeeccccc-----CCCeEEEEeehhccchhhhhhhhccCccce
Confidence 66554 21 88999999999999999986 234899999997753 44444444433333
No 166
>KOG0300|consensus
Probab=99.15 E-value=1.3e-10 Score=81.36 Aligned_cols=116 Identities=15% Similarity=0.212 Sum_probs=92.8
Q ss_pred CcEEEEEe--CCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEE-----
Q psy7062 13 GQISTVFD--SKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWD----- 85 (148)
Q Consensus 13 ~~~~~~~~--~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d----- 85 (148)
||..-.|+ .+..-.++.+++.|.+.++|.++++ .++.++.+|.+.|.+++|++.+.++++++.|++.++|.
T Consensus 146 GHkDGiW~Vaa~~tqpi~gtASADhTA~iWs~Esg--~CL~~Y~GH~GSVNsikfh~s~~L~lTaSGD~taHIW~~av~~ 223 (481)
T KOG0300|consen 146 GHKDGIWHVAADSTQPICGTASADHTARIWSLESG--ACLATYTGHTGSVNSIKFHNSGLLLLTASGDETAHIWKAAVNW 223 (481)
T ss_pred ccccceeeehhhcCCcceeecccccceeEEeeccc--cceeeecccccceeeEEeccccceEEEccCCcchHHHHHhhcC
Confidence 44444554 2222458889999999999999999 99999999999999999999999999999999999997
Q ss_pred -CCcc---------------------------------------cc---ccceEEEEccCCCEEEEEecCCceecCeeEE
Q psy7062 86 -LSLC---------------------------------------FI---QQVNALRITPDKQLLASAEELSCCYCGAAVF 122 (148)
Q Consensus 86 -~~~~---------------------------------------~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~ 122 (148)
.... |. ..+.+..|-..|+++++++.|+ +..
T Consensus 224 ~vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~~tiRvPl~~ltgH~~vV~a~dWL~gg~Q~vTaSWDR------TAn 297 (481)
T KOG0300|consen 224 EVPSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSDGHTIRVPLMRLTGHRAVVSACDWLAGGQQMVTASWDR------TAN 297 (481)
T ss_pred cCCCCCCCCCCCchhhhhcccccccccccccccCCceeeeeeeeeeccccceEehhhhcCcceeeeeeccc------cce
Confidence 2221 11 4455556777899999999988 899
Q ss_pred EeecCCCcceeccC
Q psy7062 123 VYNSCYPAAVVASN 136 (148)
Q Consensus 123 ~~d~~~~~~~~~~~ 136 (148)
+||+++...+..+.
T Consensus 298 lwDVEtge~v~~Lt 311 (481)
T KOG0300|consen 298 LWDVETGEVVNILT 311 (481)
T ss_pred eeeeccCceecccc
Confidence 99999877665443
No 167
>KOG1007|consensus
Probab=99.15 E-value=8.4e-10 Score=76.33 Aligned_cols=109 Identities=17% Similarity=0.283 Sum_probs=82.5
Q ss_pred cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEec-----CCCCCEEEEEEcc--CCCEEEEEeCCCcEEEEEC
Q psy7062 14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCE-----GVSKNVVEVGFQE--DGKWMFTGGEDCRARIWDL 86 (148)
Q Consensus 14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~-----~~~~~i~~~~~sp--~~~~l~~~~~~~~i~l~d~ 86 (148)
..++.|.|+ +..+++ -.|..|.+|+++... +.+..+. .+....++-+|+| +|..+++. .+++++.||+
T Consensus 126 i~cvew~Pn--s~klas-m~dn~i~l~~l~ess-~~vaev~ss~s~e~~~~ftsg~WspHHdgnqv~tt-~d~tl~~~D~ 200 (370)
T KOG1007|consen 126 INCVEWEPN--SDKLAS-MDDNNIVLWSLDESS-KIVAEVLSSESAEMRHSFTSGAWSPHHDGNQVATT-SDSTLQFWDL 200 (370)
T ss_pred eeeEEEcCC--CCeeEE-eccCceEEEEcccCc-chheeecccccccccceecccccCCCCccceEEEe-CCCcEEEEEc
Confidence 478899996 777777 679999999998872 2132221 2456678889998 56666555 5889999999
Q ss_pred Ccc-----cc----ccceEEEEccCCC-EEEEEecCCceecCeeEEEeecCCCccee
Q psy7062 87 SLC-----FI----QQVNALRITPDKQ-LLASAEELSCCYCGAAVFVYNSCYPAAVV 133 (148)
Q Consensus 87 ~~~-----~~----~~i~~~~~sp~~~-~l~~~~~d~~~~~~~~i~~~d~~~~~~~~ 133 (148)
++. +. +.+..+.|+|+.+ +|++++.|| .|++||.+..+.+.
T Consensus 201 RT~~~~~sI~dAHgq~vrdlDfNpnkq~~lvt~gDdg------yvriWD~R~tk~pv 251 (370)
T KOG1007|consen 201 RTMKKNNSIEDAHGQRVRDLDFNPNKQHILVTCGDDG------YVRIWDTRKTKFPV 251 (370)
T ss_pred cchhhhcchhhhhcceeeeccCCCCceEEEEEcCCCc------cEEEEeccCCCccc
Confidence 987 22 7799999999887 667777777 89999999876544
No 168
>KOG0644|consensus
Probab=99.13 E-value=5.8e-11 Score=91.62 Aligned_cols=99 Identities=13% Similarity=0.331 Sum_probs=89.2
Q ss_pred EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----
Q psy7062 15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC----- 89 (148)
Q Consensus 15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~----- 89 (148)
-|++||.. |.++.+|++|..+++|..++. ..+..+.+|...|+.++++.+...+++++.|..|++|.++.+
T Consensus 194 yca~fDrt--g~~Iitgsdd~lvKiwS~et~--~~lAs~rGhs~ditdlavs~~n~~iaaaS~D~vIrvWrl~~~~pvsv 269 (1113)
T KOG0644|consen 194 YCAIFDRT--GRYIITGSDDRLVKIWSMETA--RCLASCRGHSGDITDLAVSSNNTMIAAASNDKVIRVWRLPDGAPVSV 269 (1113)
T ss_pred eeeeeccc--cceEeecCccceeeeeeccch--hhhccCCCCccccchhccchhhhhhhhcccCceEEEEecCCCchHHH
Confidence 35667776 999999999999999999998 999999999999999999999999999999999999999988
Q ss_pred cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecC
Q psy7062 90 FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSC 127 (148)
Q Consensus 90 ~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~ 127 (148)
+. +.|++++|+|-. +.+.|| ++++||.+
T Consensus 270 LrghtgavtaiafsP~~----sss~dg------t~~~wd~r 300 (1113)
T KOG0644|consen 270 LRGHTGAVTAIAFSPRA----SSSDDG------TCRIWDAR 300 (1113)
T ss_pred HhccccceeeeccCccc----cCCCCC------ceEecccc
Confidence 32 889999999965 667777 99999987
No 169
>KOG0301|consensus
Probab=99.13 E-value=1.4e-09 Score=82.47 Aligned_cols=93 Identities=15% Similarity=0.277 Sum_probs=79.5
Q ss_pred cEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----cc-ccceEEEE
Q psy7062 26 EMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-----FI-QQVNALRI 99 (148)
Q Consensus 26 ~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-----~~-~~i~~~~~ 99 (148)
.-++++++||.|++|++. + +.+..+.+|+..+++++..+++..++++++|+++++|+...- ++ ..+|++.+
T Consensus 191 ~~flScsNDg~Ir~w~~~-g--e~l~~~~ghtn~vYsis~~~~~~~Ivs~gEDrtlriW~~~e~~q~I~lPttsiWsa~~ 267 (745)
T KOG0301|consen 191 SHFLSCSNDGSIRLWDLD-G--EVLLEMHGHTNFVYSISMALSDGLIVSTGEDRTLRIWKKDECVQVITLPTTSIWSAKV 267 (745)
T ss_pred CCeEeecCCceEEEEecc-C--ceeeeeeccceEEEEEEecCCCCeEEEecCCceEEEeecCceEEEEecCccceEEEEE
Confidence 346788999999999994 4 689999999999999998899999999999999999998754 33 68999998
Q ss_pred ccCCCEEEEEecCCceecCeeEEEeecCC
Q psy7062 100 TPDKQLLASAEELSCCYCGAAVFVYNSCY 128 (148)
Q Consensus 100 sp~~~~l~~~~~d~~~~~~~~i~~~d~~~ 128 (148)
-++|.. ++|+.|| .|++|....
T Consensus 268 L~NgDI-vvg~SDG------~VrVfT~~k 289 (745)
T KOG0301|consen 268 LLNGDI-VVGGSDG------RVRVFTVDK 289 (745)
T ss_pred eeCCCE-EEeccCc------eEEEEEecc
Confidence 888884 6777778 899998763
No 170
>KOG1408|consensus
Probab=99.12 E-value=6.4e-10 Score=84.96 Aligned_cols=105 Identities=15% Similarity=0.177 Sum_probs=87.3
Q ss_pred EEEEEeCCCCccEEEEEe--cCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeC--CCcEEEEECCcc-
Q psy7062 15 ISTVFDSKHLVEMVAALG--GYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGE--DCRARIWDLSLC- 89 (148)
Q Consensus 15 ~~~~~~~~~~~~~l~~~~--~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~--~~~i~l~d~~~~- 89 (148)
.++||+++ |+++++|- ....+++|++... ..+..+..|+-.+++++|+|.++++++.+. |..+.+||++..
T Consensus 82 t~vAfS~~--GryvatGEcG~~pa~kVw~la~h--~vVAEfvdHKY~vtcvaFsp~~kyvvSVGsQHDMIVnv~dWr~N~ 157 (1080)
T KOG1408|consen 82 TCVAFSQN--GRYVATGECGRTPASKVWSLAFH--GVVAEFVDHKYNVTCVAFSPGNKYVVSVGSQHDMIVNVNDWRVNS 157 (1080)
T ss_pred eEEEEcCC--CcEEEecccCCCccceeeeeccc--cchhhhhhccccceeeeecCCCcEEEeeccccceEEEhhhhhhcc
Confidence 58888888 99999944 2337999999988 788999999999999999999999998765 567889999866
Q ss_pred ------ccccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062 90 ------FIQQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA 130 (148)
Q Consensus 90 ------~~~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~ 130 (148)
+...+..++|+.+|.++++++ ...|++|.+...+
T Consensus 158 ~~asnkiss~Vsav~fsEdgSYfvT~g-------nrHvk~wyl~~~~ 197 (1080)
T KOG1408|consen 158 SGASNKISSVVSAVAFSEDGSYFVTSG-------NRHVKLWYLQIQS 197 (1080)
T ss_pred cccccccceeEEEEEEccCCceeeeee-------eeeEEEEEeeccc
Confidence 128899999999999988876 2289999987554
No 171
>KOG2055|consensus
Probab=99.11 E-value=3.6e-09 Score=77.06 Aligned_cols=113 Identities=17% Similarity=0.249 Sum_probs=89.4
Q ss_pred CcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCC-EEEEEeCCCcEEEEECCcc--
Q psy7062 13 GQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGK-WMFTGGEDCRARIWDLSLC-- 89 (148)
Q Consensus 13 ~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~-~l~~~~~~~~i~l~d~~~~-- 89 (148)
+..++.|+|. ..+|.+|+.|+++++|.++......+..+.-....|.+..|.|+|. .+++++....++.||+.+.
T Consensus 215 ~I~sv~FHp~--~plllvaG~d~~lrifqvDGk~N~~lqS~~l~~fPi~~a~f~p~G~~~i~~s~rrky~ysyDle~ak~ 292 (514)
T KOG2055|consen 215 GITSVQFHPT--APLLLVAGLDGTLRIFQVDGKVNPKLQSIHLEKFPIQKAEFAPNGHSVIFTSGRRKYLYSYDLETAKV 292 (514)
T ss_pred CceEEEecCC--CceEEEecCCCcEEEEEecCccChhheeeeeccCccceeeecCCCceEEEecccceEEEEeecccccc
Confidence 4578888887 7899999999999999998764455555555567788888888887 7777777778888888654
Q ss_pred ------------------------------------------------cc--ccceEEEEccCCCEEEEEecCCceecCe
Q psy7062 90 ------------------------------------------------FI--QQVNALRITPDKQLLASAEELSCCYCGA 119 (148)
Q Consensus 90 ------------------------------------------------~~--~~i~~~~~sp~~~~l~~~~~d~~~~~~~ 119 (148)
+. +.+..+.|+.+++.|+..+.+|
T Consensus 293 ~k~~~~~g~e~~~~e~FeVShd~~fia~~G~~G~I~lLhakT~eli~s~KieG~v~~~~fsSdsk~l~~~~~~G------ 366 (514)
T KOG2055|consen 293 TKLKPPYGVEEKSMERFEVSHDSNFIAIAGNNGHIHLLHAKTKELITSFKIEGVVSDFTFSSDSKELLASGGTG------ 366 (514)
T ss_pred ccccCCCCcccchhheeEecCCCCeEEEcccCceEEeehhhhhhhhheeeeccEEeeEEEecCCcEEEEEcCCc------
Confidence 11 7788899999999998888877
Q ss_pred eEEEeecCCCccee
Q psy7062 120 AVFVYNSCYPAAVV 133 (148)
Q Consensus 120 ~i~~~d~~~~~~~~ 133 (148)
.|.+||++......
T Consensus 367 eV~v~nl~~~~~~~ 380 (514)
T KOG2055|consen 367 EVYVWNLRQNSCLH 380 (514)
T ss_pred eEEEEecCCcceEE
Confidence 89999999775543
No 172
>KOG0307|consensus
Probab=99.10 E-value=2.5e-10 Score=90.14 Aligned_cols=109 Identities=15% Similarity=0.289 Sum_probs=90.7
Q ss_pred EEEEEeCCCCccEEEEEecCC--eEEEEeCCCCCCCceEEecCCCCCEEEEEEccCC-CEEEEEeCCCcEEEEECCcc--
Q psy7062 15 ISTVFDSKHLVEMVAALGGYQ--HIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDG-KWMFTGGEDCRARIWDLSLC-- 89 (148)
Q Consensus 15 ~~~~~~~~~~~~~l~~~~~d~--~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~-~~l~~~~~~~~i~l~d~~~~-- 89 (148)
..++|+|+...+++++..+|+ .|.+||++.. ..+++.+++|...|.+++||+.+ .+++++++|+.+.+|+.+++
T Consensus 210 S~l~WhP~~aTql~~As~dd~~PviqlWDlR~a-ssP~k~~~~H~~GilslsWc~~D~~lllSsgkD~~ii~wN~~tgEv 288 (1049)
T KOG0307|consen 210 SVLAWHPDHATQLLVASGDDSAPVIQLWDLRFA-SSPLKILEGHQRGILSLSWCPQDPRLLLSSGKDNRIICWNPNTGEV 288 (1049)
T ss_pred eeeeeCCCCceeeeeecCCCCCceeEeeccccc-CCchhhhcccccceeeeccCCCCchhhhcccCCCCeeEecCCCceE
Confidence 478999998887777744444 6999999875 25788889999999999999955 89999999999999999997
Q ss_pred ---cc---ccceEEEEccC-CCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062 90 ---FI---QQVNALRITPD-KQLLASAEELSCCYCGAAVFVYNSCYPA 130 (148)
Q Consensus 90 ---~~---~~i~~~~~sp~-~~~l~~~~~d~~~~~~~~i~~~d~~~~~ 130 (148)
+. .+++.+.|.|. ...++.++.|| +|.+|.+....
T Consensus 289 l~~~p~~~nW~fdv~w~pr~P~~~A~asfdg------kI~I~sl~~~~ 330 (1049)
T KOG0307|consen 289 LGELPAQGNWCFDVQWCPRNPSVMAAASFDG------KISIYSLQGTD 330 (1049)
T ss_pred eeecCCCCcceeeeeecCCCcchhhhheecc------ceeeeeeecCC
Confidence 33 78999999995 45888899988 89999877543
No 173
>KOG3881|consensus
Probab=99.10 E-value=2.5e-09 Score=76.34 Aligned_cols=105 Identities=17% Similarity=0.271 Sum_probs=91.8
Q ss_pred CCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc------cc---
Q psy7062 21 SKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC------FI--- 91 (148)
Q Consensus 21 ~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~------~~--- 91 (148)
+......||+++..+.+++||.+.+ .+++.++.--...++++..-|+++.++++..-+.+..||++.+ |.
T Consensus 212 ~g~~~~~fat~T~~hqvR~YDt~~q-RRPV~~fd~~E~~is~~~l~p~gn~Iy~gn~~g~l~~FD~r~~kl~g~~~kg~t 290 (412)
T KOG3881|consen 212 EGSPNYKFATITRYHQVRLYDTRHQ-RRPVAQFDFLENPISSTGLTPSGNFIYTGNTKGQLAKFDLRGGKLLGCGLKGIT 290 (412)
T ss_pred CCCCCceEEEEecceeEEEecCccc-CcceeEeccccCcceeeeecCCCcEEEEecccchhheecccCceeeccccCCcc
Confidence 3333678899999999999999976 4788888877889999999999999999999999999999988 33
Q ss_pred ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcce
Q psy7062 92 QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAV 132 (148)
Q Consensus 92 ~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~ 132 (148)
+.+.++..+|.++++++++-|+ .++++|+.+....
T Consensus 291 Gsirsih~hp~~~~las~GLDR------yvRIhD~ktrkll 325 (412)
T KOG3881|consen 291 GSIRSIHCHPTHPVLASCGLDR------YVRIHDIKTRKLL 325 (412)
T ss_pred CCcceEEEcCCCceEEeeccce------eEEEeecccchhh
Confidence 8899999999999999999988 8999999875443
No 174
>KOG0270|consensus
Probab=99.07 E-value=4.3e-09 Score=76.22 Aligned_cols=116 Identities=14% Similarity=0.203 Sum_probs=90.4
Q ss_pred eecC-cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccC-CCEEEEEeCCCcEEEEECC
Q psy7062 10 TAFG-QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQED-GKWMFTGGEDCRARIWDLS 87 (148)
Q Consensus 10 ~~~~-~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~-~~~l~~~~~~~~i~l~d~~ 87 (148)
++.+ ...++|++... ..++++..||+++-+|++.. .+++.++++|...|.++++++. ..++.+++.++.+++|++.
T Consensus 327 k~~g~VEkv~w~~~se-~~f~~~tddG~v~~~D~R~~-~~~vwt~~AHd~~ISgl~~n~~~p~~l~t~s~d~~Vklw~~~ 404 (463)
T KOG0270|consen 327 KFDGEVEKVAWDPHSE-NSFFVSTDDGTVYYFDIRNP-GKPVWTLKAHDDEISGLSVNIQTPGLLSTASTDKVVKLWKFD 404 (463)
T ss_pred EeccceEEEEecCCCc-eeEEEecCCceEEeeecCCC-CCceeEEEeccCCcceEEecCCCCcceeeccccceEEEEeec
Confidence 4444 57889998754 44455499999999999986 4889999999999999999985 5578889999999999996
Q ss_pred cc---------cc-ccceEEEEccCCC-EEEEEecCCceecCeeEEEeecCCCccee
Q psy7062 88 LC---------FI-QQVNALRITPDKQ-LLASAEELSCCYCGAAVFVYNSCYPAAVV 133 (148)
Q Consensus 88 ~~---------~~-~~i~~~~~sp~~~-~l~~~~~d~~~~~~~~i~~~d~~~~~~~~ 133 (148)
.- +. ++..|+++.|+-. .++.|+..+ .+++||+.+..++.
T Consensus 405 ~~~~~~v~~~~~~~~rl~c~~~~~~~a~~la~GG~k~------~~~vwd~~~~~~V~ 455 (463)
T KOG0270|consen 405 VDSPKSVKEHSFKLGRLHCFALDPDVAFTLAFGGEKA------VLRVWDIFTNSPVR 455 (463)
T ss_pred CCCCcccccccccccceeecccCCCcceEEEecCccc------eEEEeecccChhHH
Confidence 43 33 7788889988766 455555533 79999988765443
No 175
>KOG1538|consensus
Probab=99.06 E-value=2.9e-09 Score=81.02 Aligned_cols=97 Identities=21% Similarity=0.220 Sum_probs=81.8
Q ss_pred cCcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc--
Q psy7062 12 FGQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-- 89 (148)
Q Consensus 12 ~~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-- 89 (148)
+....++|.|+ |..|+. ..++.+.+||.+.+ ..+.++++|...|.+++|+.||+.+++|+.|..+.+|.-+..
T Consensus 13 hci~d~afkPD--GsqL~l-AAg~rlliyD~ndG--~llqtLKgHKDtVycVAys~dGkrFASG~aDK~VI~W~~klEG~ 87 (1081)
T KOG1538|consen 13 HCINDIAFKPD--GTQLIL-AAGSRLLVYDTSDG--TLLQPLKGHKDTVYCVAYAKDGKRFASGSADKSVIIWTSKLEGI 87 (1081)
T ss_pred cchheeEECCC--CceEEE-ecCCEEEEEeCCCc--ccccccccccceEEEEEEccCCceeccCCCceeEEEecccccce
Confidence 35677889998 444555 34678999999998 889999999999999999999999999999999999987532
Q ss_pred ----------------------------cc---------------ccceEEEEccCCCEEEEEecCC
Q psy7062 90 ----------------------------FI---------------QQVNALRITPDKQLLASAEELS 113 (148)
Q Consensus 90 ----------------------------~~---------------~~i~~~~~sp~~~~l~~~~~d~ 113 (148)
|. .++.+.+|+-||++++.|-.+|
T Consensus 88 LkYSH~D~IQCMsFNP~~h~LasCsLsdFglWS~~qK~V~K~kss~R~~~CsWtnDGqylalG~~nG 154 (1081)
T KOG1538|consen 88 LKYSHNDAIQCMSFNPITHQLASCSLSDFGLWSPEQKSVSKHKSSSRIICCSWTNDGQYLALGMFNG 154 (1081)
T ss_pred eeeccCCeeeEeecCchHHHhhhcchhhccccChhhhhHHhhhhheeEEEeeecCCCcEEEEeccCc
Confidence 10 6788889999999999998888
No 176
>KOG0650|consensus
Probab=99.06 E-value=1e-08 Score=77.02 Aligned_cols=119 Identities=8% Similarity=0.051 Sum_probs=83.0
Q ss_pred ccceeeecCcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCC-EEEEEeCCCcEEE
Q psy7062 5 LGGILTAFGQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGK-WMFTGGEDCRARI 83 (148)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~-~l~~~~~~~~i~l 83 (148)
.+-+++.+.....+.+.+..|+.|++|+.||++++|.+.++ +++++++ ..+.|.+++|+|.+. .++.......+.+
T Consensus 392 ~~lvyrGHtg~Vr~iSvdp~G~wlasGsdDGtvriWEi~Tg--Rcvr~~~-~d~~I~~vaw~P~~~~~vLAvA~~~~~~i 468 (733)
T KOG0650|consen 392 CALVYRGHTGLVRSISVDPSGEWLASGSDDGTVRIWEIATG--RCVRTVQ-FDSEIRSVAWNPLSDLCVLAVAVGECVLI 468 (733)
T ss_pred eeeeEeccCCeEEEEEecCCcceeeecCCCCcEEEEEeecc--eEEEEEe-ecceeEEEEecCCCCceeEEEEecCceEE
Confidence 34455555544444444445999999999999999999999 9999887 577899999999776 3333332222332
Q ss_pred EECCcc-------------------------------------------cc--ccceEEEEccCCCEEEEEecCCceecC
Q psy7062 84 WDLSLC-------------------------------------------FI--QQVNALRITPDKQLLASAEELSCCYCG 118 (148)
Q Consensus 84 ~d~~~~-------------------------------------------~~--~~i~~~~~sp~~~~l~~~~~d~~~~~~ 118 (148)
-+..-+ +. ..|..+.||..|.+|++...++ ..
T Consensus 469 vnp~~G~~~e~~~t~ell~~~~~~~~p~~~~~~W~~~~~~e~~~~v~~~I~~~k~i~~vtWHrkGDYlatV~~~~---~~ 545 (733)
T KOG0650|consen 469 VNPIFGDRLEVGPTKELLASAPNESEPDAAVVTWSRASLDELEKGVCIVIKHPKSIRQVTWHRKGDYLATVMPDS---GN 545 (733)
T ss_pred eCccccchhhhcchhhhhhcCCCccCCcccceeechhhhhhhccceEEEEecCCccceeeeecCCceEEEeccCC---Cc
Confidence 222111 01 6688899999999999998766 45
Q ss_pred eeEEEeecCCC
Q psy7062 119 AAVFVYNSCYP 129 (148)
Q Consensus 119 ~~i~~~d~~~~ 129 (148)
..|.+.++...
T Consensus 546 ~~VliHQLSK~ 556 (733)
T KOG0650|consen 546 KSVLIHQLSKR 556 (733)
T ss_pred ceEEEEecccc
Confidence 67888887744
No 177
>KOG2445|consensus
Probab=99.06 E-value=7.8e-09 Score=72.08 Aligned_cols=113 Identities=14% Similarity=0.129 Sum_probs=84.1
Q ss_pred cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCC-------CceEEecCCCCCEEEEEEccC--CCEEEEEeCCCcEEEE
Q psy7062 14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNP-------NPVINCEGVSKNVVEVGFQED--GKWMFTGGEDCRARIW 84 (148)
Q Consensus 14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~-------~~~~~~~~~~~~i~~~~~sp~--~~~l~~~~~~~~i~l~ 84 (148)
.-.++|.++..|+.+|+++.|+++.+|.-...+. ....++....+.|+.++|+|. |-.+++++.||.+|+|
T Consensus 62 i~rV~WAhPEfGqvvA~cS~Drtv~iWEE~~~~~~~~~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRIY 141 (361)
T KOG2445|consen 62 IWRVVWAHPEFGQVVATCSYDRTVSIWEEQEKSEEAHGRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRIY 141 (361)
T ss_pred EEEEEecCccccceEEEEecCCceeeeeecccccccccceeEEEEEeecCCcceeEEEecchhcceEEEEeccCcEEEEE
Confidence 3467788888999999999999999998732211 123445556788999999994 6688999999999999
Q ss_pred ECCcc-------cc--------------ccceEEEEcc---CCCEEEEEecCCceecCeeEEEeecC
Q psy7062 85 DLSLC-------FI--------------QQVNALRITP---DKQLLASAEELSCCYCGAAVFVYNSC 127 (148)
Q Consensus 85 d~~~~-------~~--------------~~i~~~~~sp---~~~~l~~~~~d~~~~~~~~i~~~d~~ 127 (148)
+.... ++ .+..|+.|+| ..+.|+.|+.+ .....++++||...
T Consensus 142 EA~dp~nLs~W~Lq~Ei~~~~~pp~~~~~~~~CvsWn~sr~~~p~iAvgs~e-~a~~~~~~~Iye~~ 207 (361)
T KOG2445|consen 142 EAPDPMNLSQWTLQHEIQNVIDPPGKNKQPCFCVSWNPSRMHEPLIAVGSDE-DAPHLNKVKIYEYN 207 (361)
T ss_pred ecCCccccccchhhhhhhhccCCcccccCcceEEeeccccccCceEEEEccc-CCccccceEEEEec
Confidence 99776 11 6788999998 45688888765 22333467777643
No 178
>KOG2048|consensus
Probab=99.06 E-value=5.1e-09 Score=79.16 Aligned_cols=106 Identities=15% Similarity=0.170 Sum_probs=78.1
Q ss_pred CCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc---c-------
Q psy7062 21 SKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC---F------- 90 (148)
Q Consensus 21 ~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~---~------- 90 (148)
....+..++.||+||.+..++.........+.+.-.++++.+++|+|++..+++|+.||.|++||..++ .
T Consensus 118 i~p~~~~l~IgcddGvl~~~s~~p~~I~~~r~l~rq~sRvLslsw~~~~~~i~~Gs~Dg~Iriwd~~~~~t~~~~~~~~d 197 (691)
T KOG2048|consen 118 INPENTILAIGCDDGVLYDFSIGPDKITYKRSLMRQKSRVLSLSWNPTGTKIAGGSIDGVIRIWDVKSGQTLHIITMQLD 197 (691)
T ss_pred eCCccceEEeecCCceEEEEecCCceEEEEeecccccceEEEEEecCCccEEEecccCceEEEEEcCCCceEEEeeeccc
Confidence 334478888889999887777776622222334335689999999999999999999999999999987 1
Q ss_pred --c----ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCccee
Q psy7062 91 --I----QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVV 133 (148)
Q Consensus 91 --~----~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~ 133 (148)
. .-+|++.|-.++ .|++|...| +|++||....+..+
T Consensus 198 ~l~k~~~~iVWSv~~Lrd~-tI~sgDS~G------~V~FWd~~~gTLiq 239 (691)
T KOG2048|consen 198 RLSKREPTIVWSVLFLRDS-TIASGDSAG------TVTFWDSIFGTLIQ 239 (691)
T ss_pred ccccCCceEEEEEEEeecC-cEEEecCCc------eEEEEcccCcchhh
Confidence 1 335666655444 578887766 99999987665543
No 179
>KOG1272|consensus
Probab=99.04 E-value=5.8e-10 Score=81.24 Aligned_cols=110 Identities=8% Similarity=0.043 Sum_probs=94.8
Q ss_pred EEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc--c----
Q psy7062 17 TVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC--F---- 90 (148)
Q Consensus 17 ~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~--~---- 90 (148)
+.|-|- --+|++++..|.++.-|+.++ +.+..+..-.+.+..++-+|-...+-+|..+|++.+|...+. +
T Consensus 215 LeFLPy--HfLL~~~~~~G~L~Y~DVS~G--klVa~~~t~~G~~~vm~qNP~NaVih~GhsnGtVSlWSP~skePLvKiL 290 (545)
T KOG1272|consen 215 LEFLPY--HFLLVAASEAGFLKYQDVSTG--KLVASIRTGAGRTDVMKQNPYNAVIHLGHSNGTVSLWSPNSKEPLVKIL 290 (545)
T ss_pred hcccch--hheeeecccCCceEEEeechh--hhhHHHHccCCccchhhcCCccceEEEcCCCceEEecCCCCcchHHHHH
Confidence 344454 568899999999999999999 888888877788889999999999999999999999999887 2
Q ss_pred c--ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceeccC
Q psy7062 91 I--QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVASN 136 (148)
Q Consensus 91 ~--~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~~ 136 (148)
- +++.++++.++|+++++++.|. .+++||+++...+.++.
T Consensus 291 cH~g~V~siAv~~~G~YMaTtG~Dr------~~kIWDlR~~~ql~t~~ 332 (545)
T KOG1272|consen 291 CHRGPVSSIAVDRGGRYMATTGLDR------KVKIWDLRNFYQLHTYR 332 (545)
T ss_pred hcCCCcceEEECCCCcEEeeccccc------ceeEeeeccccccceee
Confidence 2 8999999999999999999988 99999999776555443
No 180
>KOG2139|consensus
Probab=99.04 E-value=8.8e-09 Score=73.29 Aligned_cols=103 Identities=16% Similarity=0.183 Sum_probs=76.3
Q ss_pred ccceeeecCc---EEEEEeCCCCccEEEEEe-cCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCc
Q psy7062 5 LGGILTAFGQ---ISTVFDSKHLVEMVAALG-GYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCR 80 (148)
Q Consensus 5 ~~~~~~~~~~---~~~~~~~~~~~~~l~~~~-~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~ 80 (148)
...+.+..++ ....|.++ |..+++++ .+..+.+||++++ ..+.....-...+..+.||||+.+++.++.|+.
T Consensus 186 ~~qvl~~pgh~pVtsmqwn~d--gt~l~tAS~gsssi~iWdpdtg--~~~pL~~~glgg~slLkwSPdgd~lfaAt~dav 261 (445)
T KOG2139|consen 186 HLQVLQDPGHNPVTSMQWNED--GTILVTASFGSSSIMIWDPDTG--QKIPLIPKGLGGFSLLKWSPDGDVLFAATCDAV 261 (445)
T ss_pred chhheeCCCCceeeEEEEcCC--CCEEeecccCcceEEEEcCCCC--CcccccccCCCceeeEEEcCCCCEEEEecccce
Confidence 3445555554 34455565 78888877 4558999999998 333333234677889999999999999999999
Q ss_pred EEEEECCcc-------cc-ccceEEEEccCCCEEEEEec
Q psy7062 81 ARIWDLSLC-------FI-QQVNALRITPDKQLLASAEE 111 (148)
Q Consensus 81 i~l~d~~~~-------~~-~~i~~~~~sp~~~~l~~~~~ 111 (148)
.++|+.... +. +++...+|+|+|++|+.++.
T Consensus 262 frlw~e~q~wt~erw~lgsgrvqtacWspcGsfLLf~~s 300 (445)
T KOG2139|consen 262 FRLWQENQSWTKERWILGSGRVQTACWSPCGSFLLFACS 300 (445)
T ss_pred eeeehhcccceecceeccCCceeeeeecCCCCEEEEEEc
Confidence 999976554 11 88999999999997766654
No 181
>KOG2106|consensus
Probab=99.04 E-value=1.5e-08 Score=74.85 Aligned_cols=101 Identities=16% Similarity=0.240 Sum_probs=83.9
Q ss_pred cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc---c
Q psy7062 14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC---F 90 (148)
Q Consensus 14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~---~ 90 (148)
..+.+|+|. | .++.|...|...+.|.++. . +.++......++.++|+|+|.+++.|+.|+.|.+|-+... +
T Consensus 410 ~~~~~fhps--g-~va~Gt~~G~w~V~d~e~~--~-lv~~~~d~~~ls~v~ysp~G~~lAvgs~d~~iyiy~Vs~~g~~y 483 (626)
T KOG2106|consen 410 AECADFHPS--G-VVAVGTATGRWFVLDTETQ--D-LVTIHTDNEQLSVVRYSPDGAFLAVGSHDNHIYIYRVSANGRKY 483 (626)
T ss_pred eeEeeccCc--c-eEEEeeccceEEEEecccc--e-eEEEEecCCceEEEEEcCCCCEEEEecCCCeEEEEEECCCCcEE
Confidence 467777786 6 8889899999999999886 3 3344334788999999999999999999999999988654 2
Q ss_pred c-------ccceEEEEccCCCEEEEEecCCceecCeeEEEeec
Q psy7062 91 I-------QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNS 126 (148)
Q Consensus 91 ~-------~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~ 126 (148)
. ++|..+.|++|++++.+-+.|- .|.+|..
T Consensus 484 ~r~~k~~gs~ithLDwS~Ds~~~~~~S~d~------eiLyW~~ 520 (626)
T KOG2106|consen 484 SRVGKCSGSPITHLDWSSDSQFLVSNSGDY------EILYWKP 520 (626)
T ss_pred EEeeeecCceeEEeeecCCCceEEeccCce------EEEEEcc
Confidence 1 8899999999999999988755 8999953
No 182
>KOG0321|consensus
Probab=99.04 E-value=1.1e-09 Score=82.43 Aligned_cols=109 Identities=10% Similarity=0.187 Sum_probs=86.7
Q ss_pred EEEEe-CCCCccEEEEEecCCeEEEEeCCCCCCC----ceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-
Q psy7062 16 STVFD-SKHLVEMVAALGGYQHIRMYDFGSNNPN----PVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC- 89 (148)
Q Consensus 16 ~~~~~-~~~~~~~l~~~~~d~~v~~~d~~~~~~~----~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~- 89 (148)
+..|. ......+|+.+.++|.|.++|.+....+ .+..+..|...|..+.|-|....|++.+.|.++++||++..
T Consensus 54 ~~sFs~~~n~eHiLavadE~G~i~l~dt~~~~fr~ee~~lk~~~aH~nAifDl~wapge~~lVsasGDsT~r~Wdvk~s~ 133 (720)
T KOG0321|consen 54 ADSFSAAPNKEHILAVADEDGGIILFDTKSIVFRLEERQLKKPLAHKNAIFDLKWAPGESLLVSASGDSTIRPWDVKTSR 133 (720)
T ss_pred cccccCCCCccceEEEecCCCceeeecchhhhcchhhhhhcccccccceeEeeccCCCceeEEEccCCceeeeeeeccce
Confidence 44554 3444788999999999999999865222 23455679999999999996668899999999999999876
Q ss_pred -------cc--ccceEEEEcc-CCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062 90 -------FI--QQVNALRITP-DKQLLASAEELSCCYCGAAVFVYNSCYPA 130 (148)
Q Consensus 90 -------~~--~~i~~~~~sp-~~~~l~~~~~d~~~~~~~~i~~~d~~~~~ 130 (148)
+. ..+.+++|+| +...|++|++|| .|.+||++...
T Consensus 134 l~G~~~~~GH~~SvkS~cf~~~n~~vF~tGgRDg------~illWD~R~n~ 178 (720)
T KOG0321|consen 134 LVGGRLNLGHTGSVKSECFMPTNPAVFCTGGRDG------EILLWDCRCNG 178 (720)
T ss_pred eecceeecccccccchhhhccCCCcceeeccCCC------cEEEEEEeccc
Confidence 22 7789999999 556888999988 99999988544
No 183
>KOG1274|consensus
Probab=99.03 E-value=9.5e-09 Score=80.06 Aligned_cols=112 Identities=13% Similarity=0.159 Sum_probs=89.4
Q ss_pred CcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc---
Q psy7062 13 GQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC--- 89 (148)
Q Consensus 13 ~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~--- 89 (148)
+....++... +..|++++.+++|.+|.+.++ ..-..+.-.+-.+..++++.+|++++.|+.|-.|++-+....
T Consensus 56 g~~v~~ia~~--s~~f~~~s~~~tv~~y~fps~--~~~~iL~Rftlp~r~~~v~g~g~~iaagsdD~~vK~~~~~D~s~~ 131 (933)
T KOG1274|consen 56 GELVSSIACY--SNHFLTGSEQNTVLRYKFPSG--EEDTILARFTLPIRDLAVSGSGKMIAAGSDDTAVKLLNLDDSSQE 131 (933)
T ss_pred CceeEEEeec--ccceEEeeccceEEEeeCCCC--CccceeeeeeccceEEEEecCCcEEEeecCceeEEEEeccccchh
Confidence 3344555555 558888899999999999987 332222223556788999999999999999999999999876
Q ss_pred --cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceec
Q psy7062 90 --FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVA 134 (148)
Q Consensus 90 --~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~ 134 (148)
+. +++.++.|+|.+.+|++.+.|| .|++||+.+......
T Consensus 132 ~~lrgh~apVl~l~~~p~~~fLAvss~dG------~v~iw~~~~~~~~~t 175 (933)
T KOG1274|consen 132 KVLRGHDAPVLQLSYDPKGNFLAVSSCDG------KVQIWDLQDGILSKT 175 (933)
T ss_pred eeecccCCceeeeeEcCCCCEEEEEecCc------eEEEEEcccchhhhh
Confidence 33 9999999999999999999998 999999986654433
No 184
>KOG4328|consensus
Probab=99.02 E-value=2.3e-09 Score=77.95 Aligned_cols=97 Identities=19% Similarity=0.219 Sum_probs=79.0
Q ss_pred CccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccC-CCEEEEEeCCCcEEEEECCcc----------cc-
Q psy7062 24 LVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQED-GKWMFTGGEDCRARIWDLSLC----------FI- 91 (148)
Q Consensus 24 ~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~-~~~l~~~~~~~~i~l~d~~~~----------~~- 91 (148)
....++.+..-|...+||.++.+ .....+..|...|++++++|- ..++++++.|++.++||++.. +.
T Consensus 290 e~~~vl~~~~~G~f~~iD~R~~~-s~~~~~~lh~kKI~sv~~NP~~p~~laT~s~D~T~kIWD~R~l~~K~sp~lst~~H 368 (498)
T KOG4328|consen 290 ESRSVLFGDNVGNFNVIDLRTDG-SEYENLRLHKKKITSVALNPVCPWFLATASLDQTAKIWDLRQLRGKASPFLSTLPH 368 (498)
T ss_pred CCccEEEeecccceEEEEeecCC-ccchhhhhhhcccceeecCCCCchheeecccCcceeeeehhhhcCCCCcceecccc
Confidence 35556666777899999999872 335666778999999999995 558899999999999999865 12
Q ss_pred -ccceEEEEccCCCEEEEEecCCceecCeeEEEeecC
Q psy7062 92 -QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSC 127 (148)
Q Consensus 92 -~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~ 127 (148)
..|.+..|||.+-.|++.+.|. .|++||..
T Consensus 369 rrsV~sAyFSPs~gtl~TT~~D~------~IRv~dss 399 (498)
T KOG4328|consen 369 RRSVNSAYFSPSGGTLLTTCQDN------EIRVFDSS 399 (498)
T ss_pred cceeeeeEEcCCCCceEeeccCC------ceEEeecc
Confidence 6789999999776699999877 89999974
No 185
>KOG2106|consensus
Probab=98.99 E-value=1.2e-08 Score=75.29 Aligned_cols=100 Identities=15% Similarity=0.244 Sum_probs=82.3
Q ss_pred EEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc--cc--
Q psy7062 16 STVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC--FI-- 91 (148)
Q Consensus 16 ~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~--~~-- 91 (148)
.++.+|+ .+++++++.|+.+++|+ + . +.+.+.. ......+++|+|.| .++.|...|...+.|.++. +.
T Consensus 373 gla~hps--~~q~~T~gqdk~v~lW~-~-~--k~~wt~~-~~d~~~~~~fhpsg-~va~Gt~~G~w~V~d~e~~~lv~~~ 444 (626)
T KOG2106|consen 373 GLATHPS--KNQLLTCGQDKHVRLWN-D-H--KLEWTKI-IEDPAECADFHPSG-VVAVGTATGRWFVLDTETQDLVTIH 444 (626)
T ss_pred eEEcCCC--hhheeeccCcceEEEcc-C-C--ceeEEEE-ecCceeEeeccCcc-eEEEeeccceEEEEecccceeEEEE
Confidence 3444555 78889999999999999 2 2 4555543 46667899999999 9999999999999999988 22
Q ss_pred ---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCC
Q psy7062 92 ---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYP 129 (148)
Q Consensus 92 ---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~ 129 (148)
.++.+++|+|+|.+|+.|+.|+ .|++|-+...
T Consensus 445 ~d~~~ls~v~ysp~G~~lAvgs~d~------~iyiy~Vs~~ 479 (626)
T KOG2106|consen 445 TDNEQLSVVRYSPDGAFLAVGSHDN------HIYIYRVSAN 479 (626)
T ss_pred ecCCceEEEEEcCCCCEEEEecCCC------eEEEEEECCC
Confidence 8899999999999999999988 8888876644
No 186
>KOG4227|consensus
Probab=98.98 E-value=1e-08 Score=73.81 Aligned_cols=109 Identities=15% Similarity=0.173 Sum_probs=89.4
Q ss_pred cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCC----CCceEEecC-CCCCEEEEEEccCCCEEEEEeCCCcEEEEECCc
Q psy7062 14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNN----PNPVINCEG-VSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSL 88 (148)
Q Consensus 14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~----~~~~~~~~~-~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~ 88 (148)
.+++-|+.+ ++.|++|+.|..+++|+++... ++++..... |.+.|.+++|......+++|..++++.+.|+.+
T Consensus 59 iNAlqFS~N--~~~L~SGGDD~~~~~W~~de~~~~k~~KPI~~~~~~H~SNIF~L~F~~~N~~~~SG~~~~~VI~HDiEt 136 (609)
T KOG4227|consen 59 INALQFSHN--DRFLASGGDDMHGRVWNVDELMVRKTPKPIGVMEHPHRSNIFSLEFDLENRFLYSGERWGTVIKHDIET 136 (609)
T ss_pred cceeeeccC--CeEEeecCCcceeeeechHHHHhhcCCCCceeccCccccceEEEEEccCCeeEecCCCcceeEeeeccc
Confidence 456666666 9999999999999999996421 144444432 558999999999999999999999999999998
Q ss_pred c-----cc-----ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062 89 C-----FI-----QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA 130 (148)
Q Consensus 89 ~-----~~-----~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~ 130 (148)
. +. +.+..+..+|-.+.|++.+.++ .|.+||++..+
T Consensus 137 ~qsi~V~~~~~~~~~VY~m~~~P~DN~~~~~t~~~------~V~~~D~Rd~~ 182 (609)
T KOG4227|consen 137 KQSIYVANENNNRGDVYHMDQHPTDNTLIVVTRAK------LVSFIDNRDRQ 182 (609)
T ss_pred ceeeeeecccCcccceeecccCCCCceEEEEecCc------eEEEEeccCCC
Confidence 7 22 6799999999888999999988 99999988654
No 187
>KOG1523|consensus
Probab=98.98 E-value=1.2e-08 Score=71.43 Aligned_cols=106 Identities=13% Similarity=0.185 Sum_probs=89.3
Q ss_pred cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCC-CCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc---
Q psy7062 14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNN-PNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC--- 89 (148)
Q Consensus 14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~-~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~--- 89 (148)
..+-||..+ +..+|++.+...+.+|.....+ .+...+++.|...|++++|+|..+-|++++.|..-++|...++
T Consensus 13 itchAwn~d--rt~iAv~~~~~evhiy~~~~~~~w~~~htls~Hd~~vtgvdWap~snrIvtcs~drnayVw~~~~~~~W 90 (361)
T KOG1523|consen 13 ITCHAWNSD--RTQIAVSPNNHEVHIYSMLGADLWEPAHTLSEHDKIVTGVDWAPKSNRIVTCSHDRNAYVWTQPSGGTW 90 (361)
T ss_pred eeeeeecCC--CceEEeccCCceEEEEEecCCCCceeceehhhhCcceeEEeecCCCCceeEccCCCCccccccCCCCee
Confidence 567777777 8888997888899999998764 4677889999999999999999999999999999999999654
Q ss_pred ------cc--ccceEEEEccCCCEEEEEecCCceecCeeEEEeecC
Q psy7062 90 ------FI--QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSC 127 (148)
Q Consensus 90 ------~~--~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~ 127 (148)
+. ....++.|+|.++.+++++... .|.+|=.+
T Consensus 91 kptlvLlRiNrAAt~V~WsP~enkFAVgSgar------~isVcy~E 130 (361)
T KOG1523|consen 91 KPTLVLLRINRAATCVKWSPKENKFAVGSGAR------LISVCYYE 130 (361)
T ss_pred ccceeEEEeccceeeEeecCcCceEEeccCcc------EEEEEEEe
Confidence 22 7789999999999999999866 56666544
No 188
>KOG0290|consensus
Probab=98.97 E-value=1.5e-08 Score=70.25 Aligned_cols=97 Identities=23% Similarity=0.403 Sum_probs=76.6
Q ss_pred cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCC----------------------------------------------C
Q psy7062 14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNN----------------------------------------------P 47 (148)
Q Consensus 14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~----------------------------------------------~ 47 (148)
...++|.. ...+++|+.+.||++|+||++... .
T Consensus 199 V~DIaf~~-~s~~~FASvgaDGSvRmFDLR~leHSTIIYE~p~~~~pLlRLswnkqDpnymATf~~dS~~V~iLDiR~P~ 277 (364)
T KOG0290|consen 199 VYDIAFLK-GSRDVFASVGADGSVRMFDLRSLEHSTIIYEDPSPSTPLLRLSWNKQDPNYMATFAMDSNKVVILDIRVPC 277 (364)
T ss_pred eeEEEecc-CccceEEEecCCCcEEEEEecccccceEEecCCCCCCcceeeccCcCCchHHhhhhcCCceEEEEEecCCC
Confidence 34555555 447899999999999999997432 1
Q ss_pred CceEEecCCCCCEEEEEEcc-CCCEEEEEeCCCcEEEEECCcc-----------cc--ccceEEEEcc-CCCEEEEEec
Q psy7062 48 NPVINCEGVSKNVVEVGFQE-DGKWMFTGGEDCRARIWDLSLC-----------FI--QQVNALRITP-DKQLLASAEE 111 (148)
Q Consensus 48 ~~~~~~~~~~~~i~~~~~sp-~~~~l~~~~~~~~i~l~d~~~~-----------~~--~~i~~~~~sp-~~~~l~~~~~ 111 (148)
.++..+++|.+.|.+++|.| ....+++++.|...-+||+... +. +.|..+.|+| .+.+++.+..
T Consensus 278 tpva~L~~H~a~VNgIaWaPhS~~hictaGDD~qaliWDl~q~~~~~~~dPilay~a~~EVNqi~Ws~~~~Dwiai~~~ 356 (364)
T KOG0290|consen 278 TPVARLRNHQASVNGIAWAPHSSSHICTAGDDCQALIWDLQQMPRENGEDPILAYTAGGEVNQIQWSSSQPDWIAICFG 356 (364)
T ss_pred cceehhhcCcccccceEecCCCCceeeecCCcceEEEEecccccccCCCCchhhhhccceeeeeeecccCCCEEEEEec
Confidence 23455678999999999999 5668999999999999999765 11 8899999997 6778887764
No 189
>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....
Probab=98.96 E-value=4.4e-09 Score=51.96 Aligned_cols=38 Identities=26% Similarity=0.596 Sum_probs=35.8
Q ss_pred CceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEE
Q psy7062 48 NPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWD 85 (148)
Q Consensus 48 ~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d 85 (148)
+++..+.+|...|.+++|+|++..+++++.|+.+++||
T Consensus 2 ~~~~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 2 KCVRTFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD 39 (39)
T ss_dssp EEEEEEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred eEEEEEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence 46788999999999999999999999999999999997
No 190
>KOG0322|consensus
Probab=98.95 E-value=1.8e-09 Score=73.87 Aligned_cols=70 Identities=26% Similarity=0.405 Sum_probs=63.4
Q ss_pred CcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEEC
Q psy7062 13 GQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDL 86 (148)
Q Consensus 13 ~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~ 86 (148)
|...+..-++ ++++|+++-|+.+|+|..++. +++..++-|...|.+++|+|+...++.++.|.+|.+|++
T Consensus 253 Gv~gvrIRpD--~KIlATAGWD~RiRVyswrtl--~pLAVLkyHsagvn~vAfspd~~lmAaaskD~rISLWkL 322 (323)
T KOG0322|consen 253 GVSGVRIRPD--GKILATAGWDHRIRVYSWRTL--NPLAVLKYHSAGVNAVAFSPDCELMAAASKDARISLWKL 322 (323)
T ss_pred CccceEEccC--CcEEeecccCCcEEEEEeccC--CchhhhhhhhcceeEEEeCCCCchhhhccCCceEEeeec
Confidence 4445555566 999999999999999999999 899999999999999999999999999999999999997
No 191
>KOG0974|consensus
Probab=98.94 E-value=1.1e-08 Score=80.58 Aligned_cols=108 Identities=17% Similarity=0.260 Sum_probs=88.7
Q ss_pred cCcEEEEEe--CCCCccEEEEEecCCeEEEEeCCCCCCCceE-EecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCc
Q psy7062 12 FGQISTVFD--SKHLVEMVAALGGYQHIRMYDFGSNNPNPVI-NCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSL 88 (148)
Q Consensus 12 ~~~~~~~~~--~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~-~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~ 88 (148)
.+|....|+ ...+|.++++.|+|+++++|++++. +... ...+|+.++..+.+.|+ .+++++.|.+.++|+.+.
T Consensus 172 ~GHeG~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~--~~~~~~~fgHsaRvw~~~~~~n--~i~t~gedctcrvW~~~~ 247 (967)
T KOG0974|consen 172 KGHEGSIFSIVTSLDGRYIASVSDDRSIRLWPIDSR--EVLGCTGFGHSARVWACCFLPN--RIITVGEDCTCRVWGVNG 247 (967)
T ss_pred cccCCceEEEEEccCCcEEEEEecCcceeeeecccc--cccCcccccccceeEEEEeccc--eeEEeccceEEEEEeccc
Confidence 344444444 3335999999999999999999998 5554 66689999999999998 899999999999997765
Q ss_pred c----cc----ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCC
Q psy7062 89 C----FI----QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYP 129 (148)
Q Consensus 89 ~----~~----~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~ 129 (148)
. +. ..++.++.+++...+++++.|+ .+++||+...
T Consensus 248 ~~l~~y~~h~g~~iw~~~~~~~~~~~vT~g~Ds------~lk~~~l~~r 290 (967)
T KOG0974|consen 248 TQLEVYDEHSGKGIWKIAVPIGVIIKVTGGNDS------TLKLWDLNGR 290 (967)
T ss_pred ceehhhhhhhhcceeEEEEcCCceEEEeeccCc------chhhhhhhcc
Confidence 5 22 7799999999999999999988 8999996643
No 192
>KOG1963|consensus
Probab=98.94 E-value=3.3e-08 Score=76.62 Aligned_cols=117 Identities=13% Similarity=0.203 Sum_probs=91.6
Q ss_pred cEEEEEeCCCCccEEEEEecCCeEEEEeCCC--CCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc--
Q psy7062 14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGS--NNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-- 89 (148)
Q Consensus 14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~--~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-- 89 (148)
..+.+++|. +.++|++..||.|.+|.=-. ........+.=|...|.+++|+++|.++++|+.++.+-+|.+.++
T Consensus 208 ~t~~~~spn--~~~~Aa~d~dGrI~vw~d~~~~~~~~t~t~lHWH~~~V~~L~fS~~G~~LlSGG~E~VLv~Wq~~T~~k 285 (792)
T KOG1963|consen 208 ITCVALSPN--ERYLAAGDSDGRILVWRDFGSSDDSETCTLLHWHHDEVNSLSFSSDGAYLLSGGREGVLVLWQLETGKK 285 (792)
T ss_pred ceeEEeccc--cceEEEeccCCcEEEEeccccccccccceEEEecccccceeEEecCCceEeecccceEEEEEeecCCCc
Confidence 456778887 89999999999999994332 211223344447889999999999999999999999999999887
Q ss_pred --cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceeccCcc
Q psy7062 90 --FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVASNTL 138 (148)
Q Consensus 90 --~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~~~~ 138 (148)
|+ ++|..+.++||+...+....|. +|.+....+......+++.
T Consensus 286 qfLPRLgs~I~~i~vS~ds~~~sl~~~DN------qI~li~~~dl~~k~tIsgi 333 (792)
T KOG1963|consen 286 QFLPRLGSPILHIVVSPDSDLYSLVLEDN------QIHLIKASDLEIKSTISGI 333 (792)
T ss_pred ccccccCCeeEEEEEcCCCCeEEEEecCc------eEEEEeccchhhhhhccCc
Confidence 33 8999999999999988888877 8888887655544444433
No 193
>KOG2111|consensus
Probab=98.93 E-value=1.7e-08 Score=70.59 Aligned_cols=79 Identities=15% Similarity=0.248 Sum_probs=63.2
Q ss_pred eeeecCcEEEEEeCCCCccEEEEEecCCe-EEEEeCCCCCCCceEEec-C-CCCCEEEEEEccCCCEEEEEeCCCcEEEE
Q psy7062 8 ILTAFGQISTVFDSKHLVEMVAALGGYQH-IRMYDFGSNNPNPVINCE-G-VSKNVVEVGFQEDGKWMFTGGEDCRARIW 84 (148)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~l~~~~~d~~-v~~~d~~~~~~~~~~~~~-~-~~~~i~~~~~sp~~~~l~~~~~~~~i~l~ 84 (148)
++.+|.-...+...+..|.++|++|..|+ ||+||..++ ..+..++ + ....|++++|||+..+++..|..|++++|
T Consensus 176 ~I~AH~s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~~g--~~l~E~RRG~d~A~iy~iaFSp~~s~LavsSdKgTlHiF 253 (346)
T KOG2111|consen 176 IINAHDSDIACVALNLQGTLVATASTKGTLIRIFDTEDG--TLLQELRRGVDRADIYCIAFSPNSSWLAVSSDKGTLHIF 253 (346)
T ss_pred EEEcccCceeEEEEcCCccEEEEeccCcEEEEEEEcCCC--cEeeeeecCCchheEEEEEeCCCccEEEEEcCCCeEEEE
Confidence 34555544444444444999999999997 999999999 7777765 2 35679999999999999999999999999
Q ss_pred ECCc
Q psy7062 85 DLSL 88 (148)
Q Consensus 85 d~~~ 88 (148)
.++.
T Consensus 254 ~l~~ 257 (346)
T KOG2111|consen 254 SLRD 257 (346)
T ss_pred Eeec
Confidence 9865
No 194
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=98.93 E-value=5e-08 Score=71.51 Aligned_cols=104 Identities=15% Similarity=0.193 Sum_probs=76.6
Q ss_pred ccEE-EEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----cc--ccceE
Q psy7062 25 VEMV-AALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-----FI--QQVNA 96 (148)
Q Consensus 25 ~~~l-~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-----~~--~~i~~ 96 (148)
++++ ++-..++.+.+.|..+. +.+..+.........+.++|||++++..+.|+.+.++|+.+. +. .....
T Consensus 5 ~~l~~V~~~~~~~v~viD~~t~--~~~~~i~~~~~~h~~~~~s~Dgr~~yv~~rdg~vsviD~~~~~~v~~i~~G~~~~~ 82 (369)
T PF02239_consen 5 GNLFYVVERGSGSVAVIDGATN--KVVARIPTGGAPHAGLKFSPDGRYLYVANRDGTVSVIDLATGKVVATIKVGGNPRG 82 (369)
T ss_dssp GGEEEEEEGGGTEEEEEETTT---SEEEEEE-STTEEEEEE-TT-SSEEEEEETTSEEEEEETTSSSEEEEEE-SSEEEE
T ss_pred ccEEEEEecCCCEEEEEECCCC--eEEEEEcCCCCceeEEEecCCCCEEEEEcCCCeEEEEECCcccEEEEEecCCCcce
Confidence 4555 45456789999999998 888888755444566789999999999999999999999988 22 66788
Q ss_pred EEEccCCCEEEEEecCCceecCeeEEEeecCCCcceecc
Q psy7062 97 LRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVAS 135 (148)
Q Consensus 97 ~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~ 135 (148)
+++++||+++++++.. ...+.++|.++.+.+..+
T Consensus 83 i~~s~DG~~~~v~n~~-----~~~v~v~D~~tle~v~~I 116 (369)
T PF02239_consen 83 IAVSPDGKYVYVANYE-----PGTVSVIDAETLEPVKTI 116 (369)
T ss_dssp EEE--TTTEEEEEEEE-----TTEEEEEETTT--EEEEE
T ss_pred EEEcCCCCEEEEEecC-----CCceeEeccccccceeec
Confidence 9999999999988742 338999999887766544
No 195
>KOG1063|consensus
Probab=98.92 E-value=2.6e-08 Score=75.79 Aligned_cols=106 Identities=12% Similarity=0.252 Sum_probs=83.5
Q ss_pred cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCC--CceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc--
Q psy7062 14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNP--NPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-- 89 (148)
Q Consensus 14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~--~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-- 89 (148)
..-++|+|+ +.+|++.|.|+++.+|....... ......+.|+..|...+|+|++.+++|+|+|.++++|.....
T Consensus 575 VT~l~FSpd--g~~LLsvsRDRt~sl~~~~~~~~~e~~fa~~k~HtRIIWdcsW~pde~~FaTaSRDK~VkVW~~~~~~d 652 (764)
T KOG1063|consen 575 VTRLAFSPD--GRYLLSVSRDRTVSLYEVQEDIKDEFRFACLKAHTRIIWDCSWSPDEKYFATASRDKKVKVWEEPDLRD 652 (764)
T ss_pred EEEEEECCC--CcEEEEeecCceEEeeeeecccchhhhhccccccceEEEEcccCcccceeEEecCCceEEEEeccCchh
Confidence 467888898 89999999999999999864311 112235679999999999999999999999999999998765
Q ss_pred --------cc--ccceEEEEcc-CC----CEEEEEecCCceecCeeEEEeecC
Q psy7062 90 --------FI--QQVNALRITP-DK----QLLASAEELSCCYCGAAVFVYNSC 127 (148)
Q Consensus 90 --------~~--~~i~~~~~sp-~~----~~l~~~~~d~~~~~~~~i~~~d~~ 127 (148)
++ ..+..++|.| +. ..++.|-+.| .|.+|...
T Consensus 653 ~~i~~~a~~~~~~aVTAv~~~~~~~~e~~~~vavGle~G------eI~l~~~~ 699 (764)
T KOG1063|consen 653 KYISRFACLKFSLAVTAVAYLPVDHNEKGDVVAVGLEKG------EIVLWRRK 699 (764)
T ss_pred hhhhhhchhccCCceeeEEeeccccccccceEEEEeccc------EEEEEecc
Confidence 11 7788888877 22 2667777766 89999844
No 196
>KOG1272|consensus
Probab=98.91 E-value=4.5e-09 Score=76.71 Aligned_cols=96 Identities=17% Similarity=0.296 Sum_probs=78.8
Q ss_pred eCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc--cc-----c
Q psy7062 20 DSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC--FI-----Q 92 (148)
Q Consensus 20 ~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~--~~-----~ 92 (148)
..++.+-.+-+|...|+|.+|..... +++..+.-|.+.|.++++.++|.+++|.+.|..+++||++.. +. .
T Consensus 258 ~qNP~NaVih~GhsnGtVSlWSP~sk--ePLvKiLcH~g~V~siAv~~~G~YMaTtG~Dr~~kIWDlR~~~ql~t~~tp~ 335 (545)
T KOG1272|consen 258 KQNPYNAVIHLGHSNGTVSLWSPNSK--EPLVKILCHRGPVSSIAVDRGGRYMATTGLDRKVKIWDLRNFYQLHTYRTPH 335 (545)
T ss_pred hcCCccceEEEcCCCceEEecCCCCc--chHHHHHhcCCCcceEEECCCCcEEeecccccceeEeeeccccccceeecCC
Confidence 34445778888889999999999988 888888889999999999999999999999999999999987 11 5
Q ss_pred cceEEEEccCCCEEEEEecCCceecCeeEEEee
Q psy7062 93 QVNALRITPDKQLLASAEELSCCYCGAAVFVYN 125 (148)
Q Consensus 93 ~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d 125 (148)
+...+++|..|-..++-+. .|.+|.
T Consensus 336 ~a~~ls~SqkglLA~~~G~--------~v~iw~ 360 (545)
T KOG1272|consen 336 PASNLSLSQKGLLALSYGD--------HVQIWK 360 (545)
T ss_pred CccccccccccceeeecCC--------eeeeeh
Confidence 6677788776654443333 789995
No 197
>KOG2110|consensus
Probab=98.87 E-value=2.3e-07 Score=66.11 Aligned_cols=72 Identities=13% Similarity=0.273 Sum_probs=61.2
Q ss_pred cEEEEEeCCCCccEEEEEecCCe-EEEEeCCCCCCCceEEec-C-CCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc
Q psy7062 14 QISTVFDSKHLVEMVAALGGYQH-IRMYDFGSNNPNPVINCE-G-VSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC 89 (148)
Q Consensus 14 ~~~~~~~~~~~~~~l~~~~~d~~-v~~~d~~~~~~~~~~~~~-~-~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~ 89 (148)
..+++|+++ |.+||++++.|+ ||+|.+.++ +.+.+|+ + ....|.+++|+|++.+|...+..++|++|.+...
T Consensus 176 lAalafs~~--G~llATASeKGTVIRVf~v~~G--~kl~eFRRG~~~~~IySL~Fs~ds~~L~~sS~TeTVHiFKL~~~ 250 (391)
T KOG2110|consen 176 LAALAFSPD--GTLLATASEKGTVIRVFSVPEG--QKLYEFRRGTYPVSIYSLSFSPDSQFLAASSNTETVHIFKLEKV 250 (391)
T ss_pred eeEEEECCC--CCEEEEeccCceEEEEEEcCCc--cEeeeeeCCceeeEEEEEEECCCCCeEEEecCCCeEEEEEeccc
Confidence 357777777 999999999996 899999998 7888876 2 2457999999999999999999999999998643
No 198
>KOG0649|consensus
Probab=98.84 E-value=3.7e-08 Score=66.94 Aligned_cols=117 Identities=10% Similarity=0.081 Sum_probs=81.4
Q ss_pred cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCC----CCceEE--ecCC-----CCCEEEEEEccCCCEEEEEeCCCcEE
Q psy7062 14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNN----PNPVIN--CEGV-----SKNVVEVGFQEDGKWMFTGGEDCRAR 82 (148)
Q Consensus 14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~----~~~~~~--~~~~-----~~~i~~~~~sp~~~~l~~~~~~~~i~ 82 (148)
+...+|+-.....+|.+ +.||.|+-|.-+..- .+.+.. ...| -..|+++.+.|..+-++.++.|+.++
T Consensus 61 hdgpiy~~~f~d~~Lls-~gdG~V~gw~W~E~~es~~~K~lwe~~~P~~~~~~evPeINam~ldP~enSi~~AgGD~~~y 139 (325)
T KOG0649|consen 61 HDGPIYYLAFHDDFLLS-GGDGLVYGWEWNEEEESLATKRLWEVKIPMQVDAVEVPEINAMWLDPSENSILFAGGDGVIY 139 (325)
T ss_pred cCCCeeeeeeehhheee-ccCceEEEeeehhhhhhccchhhhhhcCccccCcccCCccceeEeccCCCcEEEecCCeEEE
Confidence 33444443233567778 557999999775431 011111 1112 25789999999777777777899999
Q ss_pred EEECCcc-----cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceeccCc
Q psy7062 83 IWDLSLC-----FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVASNT 137 (148)
Q Consensus 83 l~d~~~~-----~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~~~ 137 (148)
.||++++ |. ..+.++.--.....+++|++|| ++++||.++.+.+..++.
T Consensus 140 ~~dlE~G~i~r~~rGHtDYvH~vv~R~~~~qilsG~EDG------tvRvWd~kt~k~v~~ie~ 196 (325)
T KOG0649|consen 140 QVDLEDGRIQREYRGHTDYVHSVVGRNANGQILSGAEDG------TVRVWDTKTQKHVSMIEP 196 (325)
T ss_pred EEEecCCEEEEEEcCCcceeeeeeecccCcceeecCCCc------cEEEEeccccceeEEecc
Confidence 9999998 33 7788888755566789999999 999999999887665543
No 199
>KOG1240|consensus
Probab=98.84 E-value=1.4e-07 Score=75.89 Aligned_cols=108 Identities=8% Similarity=0.144 Sum_probs=82.8
Q ss_pred ccEEEEEecCCeEEEEeCCCCCCC-----ceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----------
Q psy7062 25 VEMVAALGGYQHIRMYDFGSNNPN-----PVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC---------- 89 (148)
Q Consensus 25 ~~~l~~~~~d~~v~~~d~~~~~~~-----~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~---------- 89 (148)
+.++++||.||+|++||.+.--.. ..-++.-....+..+..++.+..++.++.||.+++.++...
T Consensus 1061 ~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~~~~~~Av~t~DG~v~~~~id~~~~~~~~~~~~ 1140 (1431)
T KOG1240|consen 1061 TSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCGNGDQFAVSTKDGSVRVLRIDHYNVSKRVATQV 1140 (1431)
T ss_pred CceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEeccCCCeEEEEcCCCeEEEEEccccccccceeeee
Confidence 789999999999999999743111 12223224577888888999999999999999998888651
Q ss_pred ------------------------------------------------cc-----ccceEEEEccCCCEEEEEecCCcee
Q psy7062 90 ------------------------------------------------FI-----QQVNALRITPDKQLLASAEELSCCY 116 (148)
Q Consensus 90 ------------------------------------------------~~-----~~i~~~~~sp~~~~l~~~~~d~~~~ 116 (148)
++ +.+.+++.+|.+.+++.|+..|
T Consensus 1141 ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~~~~w~lk~~~~hG~vTSi~idp~~~WlviGts~G--- 1217 (1431)
T KOG1240|consen 1141 RIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMRHDAWRLKNQLRHGLVTSIVIDPWCNWLVIGTSRG--- 1217 (1431)
T ss_pred ecccccCCCceEEeecccccccceeEEEEEeccceEEecchhhhhHHhhhcCccccceeEEEecCCceEEEEecCCc---
Confidence 00 6788899999999999999866
Q ss_pred cCeeEEEeecCCCcceeccCcc
Q psy7062 117 CGAAVFVYNSCYPAAVVASNTL 138 (148)
Q Consensus 117 ~~~~i~~~d~~~~~~~~~~~~~ 138 (148)
.+.+||++-..++..++.-
T Consensus 1218 ---~l~lWDLRF~~~i~sw~~P 1236 (1431)
T KOG1240|consen 1218 ---QLVLWDLRFRVPILSWEHP 1236 (1431)
T ss_pred ---eEEEEEeecCceeecccCc
Confidence 8999999976666555433
No 200
>KOG0280|consensus
Probab=98.82 E-value=2e-08 Score=69.69 Aligned_cols=92 Identities=16% Similarity=0.124 Sum_probs=71.1
Q ss_pred eecCcEEEEEe---CCCCccEEEEEecCCeEEEEeCCCCCCCceEE-ecCCCCCEEEEEEcc-CCCEEEEEeCCCcEEEE
Q psy7062 10 TAFGQISTVFD---SKHLVEMVAALGGYQHIRMYDFGSNNPNPVIN-CEGVSKNVVEVGFQE-DGKWMFTGGEDCRARIW 84 (148)
Q Consensus 10 ~~~~~~~~~~~---~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~-~~~~~~~i~~~~~sp-~~~~l~~~~~~~~i~l~ 84 (148)
.+..|..-+|- .....+++.+|++|+.+..||++.++ +.+.. .+.|+..|.+|.-+| .+.++++|+.|..|++|
T Consensus 160 ~wk~He~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~-~~i~~n~kvH~~GV~SI~ss~~~~~~I~TGsYDe~i~~~ 238 (339)
T KOG0280|consen 160 TWKVHEFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPK-TFIWHNSKVHTSGVVSIYSSPPKPTYIATGSYDECIRVL 238 (339)
T ss_pred cccccceeeeeeecccCCCceEEecCCCceEEEEEecCCc-ceeeecceeeecceEEEecCCCCCceEEEeccccceeee
Confidence 34445544552 22336899999999999999999552 44443 456899999998886 67899999999999999
Q ss_pred ECCcc----cc----ccceEEEEccC
Q psy7062 85 DLSLC----FI----QQVNALRITPD 102 (148)
Q Consensus 85 d~~~~----~~----~~i~~~~~sp~ 102 (148)
|.++. +. +.++.+.++|.
T Consensus 239 DtRnm~kPl~~~~v~GGVWRi~~~p~ 264 (339)
T KOG0280|consen 239 DTRNMGKPLFKAKVGGGVWRIKHHPE 264 (339)
T ss_pred ehhcccCccccCccccceEEEEecch
Confidence 99975 33 88999999994
No 201
>KOG1517|consensus
Probab=98.81 E-value=9.7e-08 Score=75.98 Aligned_cols=112 Identities=17% Similarity=0.266 Sum_probs=86.9
Q ss_pred ccEEEEEecCCeEEEEeCCCCCCC-ceEEecCCCCC--EEEEEEccCCC-EEEEEeCCCcEEEEECCcc-----cc----
Q psy7062 25 VEMVAALGGYQHIRMYDFGSNNPN-PVINCEGVSKN--VVEVGFQEDGK-WMFTGGEDCRARIWDLSLC-----FI---- 91 (148)
Q Consensus 25 ~~~l~~~~~d~~v~~~d~~~~~~~-~~~~~~~~~~~--i~~~~~sp~~~-~l~~~~~~~~i~l~d~~~~-----~~---- 91 (148)
|+++++|..||++++||.+..... .+...+.|+.. |..+.+.+.|- .+++|+.+|.|++||++.. +.
T Consensus 1221 gn~i~AGfaDGsvRvyD~R~a~~ds~v~~~R~h~~~~~Iv~~slq~~G~~elvSgs~~G~I~~~DlR~~~~e~~~~iv~~ 1300 (1387)
T KOG1517|consen 1221 GNIIAAGFADGSVRVYDRRMAPPDSLVCVYREHNDVEPIVHLSLQRQGLGELVSGSQDGDIQLLDLRMSSKETFLTIVAH 1300 (1387)
T ss_pred CceEEEeecCCceEEeecccCCccccceeecccCCcccceeEEeecCCCcceeeeccCCeEEEEecccCcccccceeeec
Confidence 799999999999999999876222 45666778877 99999999776 4999999999999999984 21
Q ss_pred ---c-cceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc--ceeccCcccCcce
Q psy7062 92 ---Q-QVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA--AVVASNTLVKPQV 143 (148)
Q Consensus 92 ---~-~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~--~~~~~~~~~~~~~ 143 (148)
+ ..+++..|++...+++|+. + .|++|++.... .......++.+.+
T Consensus 1301 ~~yGs~lTal~VH~hapiiAsGs~-q------~ikIy~~~G~~l~~~k~n~~F~~q~~ 1351 (1387)
T KOG1517|consen 1301 WEYGSALTALTVHEHAPIIASGSA-Q------LIKIYSLSGEQLNIIKYNPGFMGQRI 1351 (1387)
T ss_pred cccCccceeeeeccCCCeeeecCc-c------eEEEEecChhhhcccccCcccccCcC
Confidence 2 3899999999999999986 4 89999977432 2334444444443
No 202
>KOG0974|consensus
Probab=98.81 E-value=2e-07 Score=73.59 Aligned_cols=93 Identities=16% Similarity=0.264 Sum_probs=80.6
Q ss_pred ccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-------cc--ccce
Q psy7062 25 VEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-------FI--QQVN 95 (148)
Q Consensus 25 ~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-------~~--~~i~ 95 (148)
.-++++|+.-+.+.+|+...- ..+. .+.+|.+.|..+.++.||.++++.|.|.++++|++.+. |. .+++
T Consensus 145 ~~~i~~gsv~~~iivW~~~~d-n~p~-~l~GHeG~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~~~~~~~fgHsaRvw 222 (967)
T KOG0974|consen 145 ELYIASGSVFGEIIVWKPHED-NKPI-RLKGHEGSIFSIVTSLDGRYIASVSDDRSIRLWPIDSREVLGCTGFGHSARVW 222 (967)
T ss_pred EEEEEeccccccEEEEecccc-CCcc-eecccCCceEEEEEccCCcEEEEEecCcceeeeecccccccCcccccccceeE
Confidence 667888888899999999843 2333 56789999999999999999999999999999999887 33 8999
Q ss_pred EEEEccCCCEEEEEecCCceecCeeEEEeecC
Q psy7062 96 ALRITPDKQLLASAEELSCCYCGAAVFVYNSC 127 (148)
Q Consensus 96 ~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~ 127 (148)
.++|.|+ .+++++.|. +.++|+..
T Consensus 223 ~~~~~~n--~i~t~gedc------tcrvW~~~ 246 (967)
T KOG0974|consen 223 ACCFLPN--RIITVGEDC------TCRVWGVN 246 (967)
T ss_pred EEEeccc--eeEEeccce------EEEEEecc
Confidence 9999999 899999988 99999654
No 203
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=98.81 E-value=3e-07 Score=66.33 Aligned_cols=109 Identities=12% Similarity=0.196 Sum_probs=75.5
Q ss_pred CcEEEEEeCCCCccEEEEEec-CCeEEEEeCCCC--CCCceEEecCC------CCCEEEEEEccCCCEEEEEeC-CCcEE
Q psy7062 13 GQISTVFDSKHLVEMVAALGG-YQHIRMYDFGSN--NPNPVINCEGV------SKNVVEVGFQEDGKWMFTGGE-DCRAR 82 (148)
Q Consensus 13 ~~~~~~~~~~~~~~~l~~~~~-d~~v~~~d~~~~--~~~~~~~~~~~------~~~i~~~~~sp~~~~l~~~~~-~~~i~ 82 (148)
++..++|+++ +++++++.. +++|.+|+++.. ..+.+..+..+ ......+.++|++++++++.. ++.|.
T Consensus 176 ~p~~~~~~pd--g~~lyv~~~~~~~v~v~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~i~~~pdg~~lyv~~~~~~~I~ 253 (330)
T PRK11028 176 GPRHMVFHPN--QQYAYCVNELNSSVDVWQLKDPHGEIECVQTLDMMPADFSDTRWAADIHITPDGRHLYACDRTASLIS 253 (330)
T ss_pred CCceEEECCC--CCEEEEEecCCCEEEEEEEeCCCCCEEEEEEEecCCCcCCCCccceeEEECCCCCEEEEecCCCCeEE
Confidence 3567888887 788877665 789999999742 11222232211 123346889999999988765 68899
Q ss_pred EEECCcc---c--c------ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCC
Q psy7062 83 IWDLSLC---F--I------QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCY 128 (148)
Q Consensus 83 l~d~~~~---~--~------~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~ 128 (148)
+|++... + . ...+.+.++|+|++|++++.. .++|.+|++..
T Consensus 254 v~~i~~~~~~~~~~~~~~~~~~p~~~~~~~dg~~l~va~~~-----~~~v~v~~~~~ 305 (330)
T PRK11028 254 VFSVSEDGSVLSFEGHQPTETQPRGFNIDHSGKYLIAAGQK-----SHHISVYEIDG 305 (330)
T ss_pred EEEEeCCCCeEEEeEEEeccccCCceEECCCCCEEEEEEcc-----CCcEEEEEEcC
Confidence 9998543 1 1 356789999999999988751 23899998753
No 204
>COG2319 FOG: WD40 repeat [General function prediction only]
Probab=98.81 E-value=3.4e-07 Score=65.88 Aligned_cols=107 Identities=22% Similarity=0.385 Sum_probs=84.2
Q ss_pred EEEEEeCCCCccEEEEEec-CCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCC-EEEEEeCCCcEEEEECCcc---
Q psy7062 15 ISTVFDSKHLVEMVAALGG-YQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGK-WMFTGGEDCRARIWDLSLC--- 89 (148)
Q Consensus 15 ~~~~~~~~~~~~~l~~~~~-d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~-~l~~~~~~~~i~l~d~~~~--- 89 (148)
..++|.++ +..+++++. ++.+++|+.... ..+..+.+|...+.+++|+|++. .+++++.|+.+++||....
T Consensus 159 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~wd~~~~~~~ 234 (466)
T COG2319 159 TSLAFSPD--GKLLASGSSLDGTIKLWDLRTG--KPLSTLAGHTDPVSSLAFSPDGGLLIASGSSDGTIRLWDLSTGKLL 234 (466)
T ss_pred EEEEECCC--CCEEEecCCCCCceEEEEcCCC--ceEEeeccCCCceEEEEEcCCcceEEEEecCCCcEEEEECCCCcEE
Confidence 35677777 667788675 999999999986 78888888999999999999998 5566689999999988855
Q ss_pred c-c----ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcc
Q psy7062 90 F-I----QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAA 131 (148)
Q Consensus 90 ~-~----~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~ 131 (148)
. . .......|+|++..+++++.|+ .+++||......
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~------~~~~~~~~~~~~ 275 (466)
T COG2319 235 RSTLSGHSDSVVSSFSPDGSLLASGSSDG------TIRLWDLRSSSS 275 (466)
T ss_pred eeecCCCCcceeEeECCCCCEEEEecCCC------cEEEeeecCCCc
Confidence 1 1 1111227999998888888877 899999886554
No 205
>KOG1587|consensus
Probab=98.80 E-value=5.5e-08 Score=74.13 Aligned_cols=104 Identities=15% Similarity=0.218 Sum_probs=81.0
Q ss_pred cEEEEEeCCCCccEEEEEecCCeEEEEeCC-CCCCCceEEecCCCCCEEEEEEcc-CCCEEEEEeCCCcEEEEECCcc--
Q psy7062 14 QISTVFDSKHLVEMVAALGGYQHIRMYDFG-SNNPNPVINCEGVSKNVVEVGFQE-DGKWMFTGGEDCRARIWDLSLC-- 89 (148)
Q Consensus 14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~-~~~~~~~~~~~~~~~~i~~~~~sp-~~~~l~~~~~~~~i~l~d~~~~-- 89 (148)
+.++.+.|-. ..++.+ +.|.++++|... .. .++..+..+...+++++||| ....+++++.+|.+.+||+...
T Consensus 401 v~~v~~nPF~-~k~fls-~gDW~vriWs~~~~~--~Pl~~~~~~~~~v~~vaWSptrpavF~~~d~~G~l~iWDLl~~~~ 476 (555)
T KOG1587|consen 401 VYAVSRNPFY-PKNFLS-VGDWTVRIWSEDVIA--SPLLSLDSSPDYVTDVAWSPTRPAVFATVDGDGNLDIWDLLQDDE 476 (555)
T ss_pred eEeeecCCCc-cceeee-eccceeEeccccCCC--CcchhhhhccceeeeeEEcCcCceEEEEEcCCCceehhhhhcccc
Confidence 3444444543 444555 449999999998 44 67777777778899999999 4568889999999999999765
Q ss_pred ---cc-----ccceEEEEccCCCEEEEEecCCceecCeeEEEeecC
Q psy7062 90 ---FI-----QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSC 127 (148)
Q Consensus 90 ---~~-----~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~ 127 (148)
.. .....+.|++.|+.|+.|...| ++.+|++.
T Consensus 477 ~Pv~s~~~~~~~l~~~~~s~~g~~lavGd~~G------~~~~~~l~ 516 (555)
T KOG1587|consen 477 EPVLSQKVCSPALTRVRWSPNGKLLAVGDANG------TTHILKLS 516 (555)
T ss_pred CCcccccccccccceeecCCCCcEEEEecCCC------cEEEEEcC
Confidence 11 5567788899999999999977 99999986
No 206
>KOG4227|consensus
Probab=98.79 E-value=1e-07 Score=68.76 Aligned_cols=108 Identities=10% Similarity=0.077 Sum_probs=87.0
Q ss_pred CcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCC---CCEEEEEEccCCCEEEEEeCCCcEEEEECCcc
Q psy7062 13 GQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVS---KNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC 89 (148)
Q Consensus 13 ~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~---~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~ 89 (148)
+..+++|+.- +..+.+|..+++|.+.|+++. +.+..+. |. +.|+.+..+|-.+.+++.+.++.+.+||.+..
T Consensus 107 NIF~L~F~~~--N~~~~SG~~~~~VI~HDiEt~--qsi~V~~-~~~~~~~VY~m~~~P~DN~~~~~t~~~~V~~~D~Rd~ 181 (609)
T KOG4227|consen 107 NIFSLEFDLE--NRFLYSGERWGTVIKHDIETK--QSIYVAN-ENNNRGDVYHMDQHPTDNTLIVVTRAKLVSFIDNRDR 181 (609)
T ss_pred ceEEEEEccC--CeeEecCCCcceeEeeecccc--eeeeeec-ccCcccceeecccCCCCceEEEEecCceEEEEeccCC
Confidence 3567777765 788999999999999999998 7777664 44 48999999999999999999999999999866
Q ss_pred -------c-c---ccceEEEEcc-CCCEEEEEecCCceecCeeEEEeecCCCcc
Q psy7062 90 -------F-I---QQVNALRITP-DKQLLASAEELSCCYCGAAVFVYNSCYPAA 131 (148)
Q Consensus 90 -------~-~---~~i~~~~~sp-~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~ 131 (148)
+ . .....+-|+| ...+|++.+..+ -+-+||.+.+..
T Consensus 182 ~~~~~~~~~AN~~~~F~t~~F~P~~P~Li~~~~~~~------G~~~~D~R~~~~ 229 (609)
T KOG4227|consen 182 QNPISLVLPANSGKNFYTAEFHPETPALILVNSETG------GPNVFDRRMQAR 229 (609)
T ss_pred CCCCceeeecCCCccceeeeecCCCceeEEeccccC------CCCceeeccccc
Confidence 1 1 6678889999 456777777655 477999987654
No 207
>KOG2321|consensus
Probab=98.79 E-value=1.3e-07 Score=70.86 Aligned_cols=111 Identities=14% Similarity=0.158 Sum_probs=90.1
Q ss_pred EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----
Q psy7062 15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC----- 89 (148)
Q Consensus 15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~----- 89 (148)
...+|+. .+.+++++| ....|.-++++.+ +.+..+......+..+..++...++++|+.+|.+..||.+..
T Consensus 137 RDm~y~~-~scDly~~g-sg~evYRlNLEqG--rfL~P~~~~~~~lN~v~in~~hgLla~Gt~~g~VEfwDpR~ksrv~~ 212 (703)
T KOG2321|consen 137 RDMKYHK-PSCDLYLVG-SGSEVYRLNLEQG--RFLNPFETDSGELNVVSINEEHGLLACGTEDGVVEFWDPRDKSRVGT 212 (703)
T ss_pred ccccccC-CCccEEEee-cCcceEEEEcccc--ccccccccccccceeeeecCccceEEecccCceEEEecchhhhhhee
Confidence 3444543 236777774 4566777799998 889999877889999999999999999999999999999876
Q ss_pred cc--------------ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceecc
Q psy7062 90 FI--------------QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVAS 135 (148)
Q Consensus 90 ~~--------------~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~ 135 (148)
+. ..+.++.|+-+|-.+++|..+| .+.|||++..++...-
T Consensus 213 l~~~~~v~s~pg~~~~~svTal~F~d~gL~~aVGts~G------~v~iyDLRa~~pl~~k 266 (703)
T KOG2321|consen 213 LDAASSVNSHPGGDAAPSVTALKFRDDGLHVAVGTSTG------SVLIYDLRASKPLLVK 266 (703)
T ss_pred eecccccCCCccccccCcceEEEecCCceeEEeeccCC------cEEEEEcccCCceeec
Confidence 11 3489999999999999999988 9999999987765433
No 208
>KOG1524|consensus
Probab=98.79 E-value=1.2e-07 Score=70.71 Aligned_cols=96 Identities=17% Similarity=0.258 Sum_probs=71.4
Q ss_pred CcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc---
Q psy7062 13 GQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC--- 89 (148)
Q Consensus 13 ~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~--- 89 (148)
...|++|+|+++ .. +. +..+.+.+-.+.-. ..+...++|.+-|.+++|++....+++|+.|-..++||....
T Consensus 147 ~v~c~~W~p~S~-~v-l~-c~g~h~~IKpL~~n--~k~i~WkAHDGiiL~~~W~~~s~lI~sgGED~kfKvWD~~G~~Lf 221 (737)
T KOG1524|consen 147 SIRCARWAPNSN-SI-VF-CQGGHISIKPLAAN--SKIIRWRAHDGLVLSLSWSTQSNIIASGGEDFRFKIWDAQGANLF 221 (737)
T ss_pred eeEEEEECCCCC-ce-EE-ecCCeEEEeecccc--cceeEEeccCcEEEEeecCccccceeecCCceeEEeecccCcccc
Confidence 457999999853 33 33 33455666555544 445666789999999999999999999999999999998654
Q ss_pred -----------------------------cc----ccceEEEEccCCCEEEEEecCC
Q psy7062 90 -----------------------------FI----QQVNALRITPDKQLLASAEELS 113 (148)
Q Consensus 90 -----------------------------~~----~~i~~~~~sp~~~~l~~~~~d~ 113 (148)
|. +.|..++||+||.++++|+..|
T Consensus 222 ~S~~~ey~ITSva~npd~~~~v~S~nt~R~~~p~~GSifnlsWS~DGTQ~a~gt~~G 278 (737)
T KOG1524|consen 222 TSAAEEYAITSVAFNPEKDYLLWSYNTARFSSPRVGSIFNLSWSADGTQATCGTSTG 278 (737)
T ss_pred cCChhccceeeeeeccccceeeeeeeeeeecCCCccceEEEEEcCCCceeeccccCc
Confidence 11 6677777888887777777666
No 209
>KOG1523|consensus
Probab=98.78 E-value=6.8e-08 Score=67.75 Aligned_cols=97 Identities=10% Similarity=0.099 Sum_probs=79.8
Q ss_pred EEEEEeCCCCccEEEEEecCCeEEEEeC-CCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----
Q psy7062 15 ISTVFDSKHLVEMVAALGGYQHIRMYDF-GSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC---- 89 (148)
Q Consensus 15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~-~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~---- 89 (148)
.+++|++. ++.+++++.|+.-.+|.. +.+.-++.-.+.-+....+++.|+|.++.+++|+....+.+|-.+..
T Consensus 59 tgvdWap~--snrIvtcs~drnayVw~~~~~~~WkptlvLlRiNrAAt~V~WsP~enkFAVgSgar~isVcy~E~ENdWW 136 (361)
T KOG1523|consen 59 TGVDWAPK--SNRIVTCSHDRNAYVWTQPSGGTWKPTLVLLRINRAATCVKWSPKENKFAVGSGARLISVCYYEQENDWW 136 (361)
T ss_pred eEEeecCC--CCceeEccCCCCccccccCCCCeeccceeEEEeccceeeEeecCcCceEEeccCccEEEEEEEeccccee
Confidence 56667776 788999999999999999 44423444444457889999999999999999999999999888765
Q ss_pred ----cc----ccceEEEEccCCCEEEEEecCC
Q psy7062 90 ----FI----QQVNALRITPDKQLLASAEELS 113 (148)
Q Consensus 90 ----~~----~~i~~~~~sp~~~~l~~~~~d~ 113 (148)
+. +-|.++.|+|++-.|+.|+.|+
T Consensus 137 VsKhikkPirStv~sldWhpnnVLlaaGs~D~ 168 (361)
T KOG1523|consen 137 VSKHIKKPIRSTVTSLDWHPNNVLLAAGSTDG 168 (361)
T ss_pred hhhhhCCccccceeeeeccCCcceecccccCc
Confidence 11 6789999999999999999998
No 210
>KOG1310|consensus
Probab=98.77 E-value=2.9e-08 Score=74.11 Aligned_cols=109 Identities=17% Similarity=0.245 Sum_probs=88.0
Q ss_pred CcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCC--------CCceEEecCCCCCEEEEEEccCC-CEEEEEeCCCcEEE
Q psy7062 13 GQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNN--------PNPVINCEGVSKNVVEVGFQEDG-KWMFTGGEDCRARI 83 (148)
Q Consensus 13 ~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~--------~~~~~~~~~~~~~i~~~~~sp~~-~~l~~~~~~~~i~l 83 (148)
+..++.|-|..+.+++++|..|..|++||+...+ ......+.-|...|..++..|++ ..+.++++||+++-
T Consensus 95 NIFsvKFvP~tnnriv~sgAgDk~i~lfdl~~~~~~~~d~~~~~~~~~~~cht~rVKria~~p~~PhtfwsasEDGtirQ 174 (758)
T KOG1310|consen 95 NIFSVKFVPYTNNRIVLSGAGDKLIKLFDLDSSKEGGMDHGMEETTRCWSCHTDRVKRIATAPNGPHTFWSASEDGTIRQ 174 (758)
T ss_pred ceeEEeeeccCCCeEEEeccCcceEEEEecccccccccccCccchhhhhhhhhhhhhheecCCCCCceEEEecCCcceee
Confidence 3567777788889999999999999999998521 23455566689999999999987 79999999999999
Q ss_pred EECCcc------------cc------ccceEEEEcc-CCCEEEEEecCCceecCeeEEEeecC
Q psy7062 84 WDLSLC------------FI------QQVNALRITP-DKQLLASAEELSCCYCGAAVFVYNSC 127 (148)
Q Consensus 84 ~d~~~~------------~~------~~i~~~~~sp-~~~~l~~~~~d~~~~~~~~i~~~d~~ 127 (148)
+|++.. +. ....++..+| +..+|++|+.|. ..++||.+
T Consensus 175 yDiREph~c~p~~~~~~~l~ny~~~lielk~ltisp~rp~~laVGgsdp------farLYD~R 231 (758)
T KOG1310|consen 175 YDIREPHVCNPDEDCPSILVNYNPQLIELKCLTISPSRPYYLAVGGSDP------FARLYDRR 231 (758)
T ss_pred ecccCCccCCccccccHHHHHhchhhheeeeeeecCCCCceEEecCCCc------hhhhhhhh
Confidence 999875 11 5567888999 556888888876 88999954
No 211
>KOG1517|consensus
Probab=98.77 E-value=1.3e-07 Score=75.32 Aligned_cols=117 Identities=17% Similarity=0.219 Sum_probs=83.2
Q ss_pred ccceeeecCcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEec-CCCCCEEEEEEc-cCCCEEEEEeCCCcEE
Q psy7062 5 LGGILTAFGQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCE-GVSKNVVEVGFQ-EDGKWMFTGGEDCRAR 82 (148)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~-~~~~~i~~~~~s-p~~~~l~~~~~~~~i~ 82 (148)
|.+.+.......+.++.......|+++++-..|++||.... .....+. +....++++.-+ +.|+.++.|-.||.++
T Consensus 1157 Ls~~~~~~r~~~~v~dWqQ~~G~Ll~tGd~r~IRIWDa~~E--~~~~diP~~s~t~vTaLS~~~~~gn~i~AGfaDGsvR 1234 (1387)
T KOG1517|consen 1157 LSDQLPGARGTGLVVDWQQQSGHLLVTGDVRSIRIWDAHKE--QVVADIPYGSSTLVTALSADLVHGNIIAAGFADGSVR 1234 (1387)
T ss_pred ccccCccCCCCCeeeehhhhCCeEEecCCeeEEEEEecccc--eeEeecccCCCccceeecccccCCceEEEeecCCceE
Confidence 33444433333455564444555555476789999999876 5555444 345567777544 4579999999999999
Q ss_pred EEECCcc--------cc-----ccceEEEEccCCC-EEEEEecCCceecCeeEEEeecCCC
Q psy7062 83 IWDLSLC--------FI-----QQVNALRITPDKQ-LLASAEELSCCYCGAAVFVYNSCYP 129 (148)
Q Consensus 83 l~d~~~~--------~~-----~~i~~~~~sp~~~-~l~~~~~d~~~~~~~~i~~~d~~~~ 129 (148)
+||.+.. .. .+|..+.+-++|- .|++|+.+| .|++||++.+
T Consensus 1235 vyD~R~a~~ds~v~~~R~h~~~~~Iv~~slq~~G~~elvSgs~~G------~I~~~DlR~~ 1289 (1387)
T KOG1517|consen 1235 VYDRRMAPPDSLVCVYREHNDVEPIVHLSLQRQGLGELVSGSQDG------DIQLLDLRMS 1289 (1387)
T ss_pred EeecccCCccccceeecccCCcccceeEEeecCCCcceeeeccCC------eEEEEecccC
Confidence 9999876 11 4489999988664 699999988 9999999975
No 212
>KOG2315|consensus
Probab=98.77 E-value=4e-07 Score=67.98 Aligned_cols=109 Identities=11% Similarity=0.170 Sum_probs=82.3
Q ss_pred cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCC---CcEEEEECCcc-
Q psy7062 14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGED---CRARIWDLSLC- 89 (148)
Q Consensus 14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~---~~i~l~d~~~~- 89 (148)
..++.|++++..--++.|-.-..+-+||++.. ++..+. .+.-.++-|+|.|++++.++.+ |.+-+||..+.
T Consensus 273 Vhdv~W~~s~~EF~VvyGfMPAkvtifnlr~~---~v~df~--egpRN~~~fnp~g~ii~lAGFGNL~G~mEvwDv~n~K 347 (566)
T KOG2315|consen 273 VHDVTWSPSGREFAVVYGFMPAKVTIFNLRGK---PVFDFP--EGPRNTAFFNPHGNIILLAGFGNLPGDMEVWDVPNRK 347 (566)
T ss_pred ceEEEECCCCCEEEEEEecccceEEEEcCCCC---EeEeCC--CCCccceEECCCCCEEEEeecCCCCCceEEEeccchh
Confidence 46788888743233334334458999999874 666664 5556778999999999888775 78999999887
Q ss_pred ----cc-ccceEEEEccCCCEEEEEecCCceecCeeEEEeecC
Q psy7062 90 ----FI-QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSC 127 (148)
Q Consensus 90 ----~~-~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~ 127 (148)
+. ....-+.|+|||++++++.....++-.+-++||++.
T Consensus 348 ~i~~~~a~~tt~~eW~PdGe~flTATTaPRlrvdNg~Kiwhyt 390 (566)
T KOG2315|consen 348 LIAKFKAANTTVFEWSPDGEYFLTATTAPRLRVDNGIKIWHYT 390 (566)
T ss_pred hccccccCCceEEEEcCCCcEEEEEeccccEEecCCeEEEEec
Confidence 33 666778999999999999987655555569999976
No 213
>PRK05137 tolB translocation protein TolB; Provisional
Probab=98.76 E-value=7.2e-07 Score=66.81 Aligned_cols=108 Identities=11% Similarity=0.123 Sum_probs=74.8
Q ss_pred cEEEEEeCCCCccEEEEEec---CCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEE-EEeCCCc--EEEEECC
Q psy7062 14 QISTVFDSKHLVEMVAALGG---YQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMF-TGGEDCR--ARIWDLS 87 (148)
Q Consensus 14 ~~~~~~~~~~~~~~l~~~~~---d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~-~~~~~~~--i~l~d~~ 87 (148)
....+|+|+ |+.|+..+. +..+.+||+.++ +. ..+..+...+...+|+|||+.++ +.+.++. |++||+.
T Consensus 204 v~~p~wSpD--G~~lay~s~~~g~~~i~~~dl~~g--~~-~~l~~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~ 278 (435)
T PRK05137 204 VLTPRFSPN--RQEITYMSYANGRPRVYLLDLETG--QR-ELVGNFPGMTFAPRFSPDGRKVVMSLSQGGNTDIYTMDLR 278 (435)
T ss_pred eEeeEECCC--CCEEEEEEecCCCCEEEEEECCCC--cE-EEeecCCCcccCcEECCCCCEEEEEEecCCCceEEEEECC
Confidence 346777887 666666553 358999999887 33 34444566677889999998764 5555554 7777887
Q ss_pred cc----cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCC
Q psy7062 88 LC----FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYP 129 (148)
Q Consensus 88 ~~----~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~ 129 (148)
++ +. .......|+|||+.|+..+... +...|+++|+...
T Consensus 279 ~~~~~~Lt~~~~~~~~~~~spDG~~i~f~s~~~---g~~~Iy~~d~~g~ 324 (435)
T PRK05137 279 SGTTTRLTDSPAIDTSPSYSPDGSQIVFESDRS---GSPQLYVMNADGS 324 (435)
T ss_pred CCceEEccCCCCccCceeEcCCCCEEEEEECCC---CCCeEEEEECCCC
Confidence 76 32 3456789999999888776422 2347888887643
No 214
>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats.
Probab=98.76 E-value=1.1e-06 Score=66.15 Aligned_cols=111 Identities=12% Similarity=0.134 Sum_probs=79.4
Q ss_pred eecCcEEEEEeCCCCccEEEEEe---cCC----eEEEEeCCCCCCCceE--EecCCCCCEEEEEEccCCCEEEEEeCCCc
Q psy7062 10 TAFGQISTVFDSKHLVEMVAALG---GYQ----HIRMYDFGSNNPNPVI--NCEGVSKNVVEVGFQEDGKWMFTGGEDCR 80 (148)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~l~~~~---~d~----~v~~~d~~~~~~~~~~--~~~~~~~~i~~~~~sp~~~~l~~~~~~~~ 80 (148)
+-.++..+.|+.....++..+.- .++ .-.+|++...+.+.+. .+. .++.+.+.+++|+...++.|+.||.
T Consensus 204 TE~dPl~~~Fs~~~~~qi~tVE~s~s~~g~~~~d~ciYE~~r~klqrvsvtsip-L~s~v~~ca~sp~E~kLvlGC~DgS 282 (545)
T PF11768_consen 204 TENDPLDVEFSLNQPYQIHTVEQSISVKGEPSADSCIYECSRNKLQRVSVTSIP-LPSQVICCARSPSEDKLVLGCEDGS 282 (545)
T ss_pred ecCCcEEEEccCCCCcEEEEEEEecCCCCCceeEEEEEEeecCceeEEEEEEEe-cCCcceEEecCcccceEEEEecCCe
Confidence 33345666776544444444321 123 3556777655222222 232 5778899999999999999999999
Q ss_pred EEEEECCcc---cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecC
Q psy7062 81 ARIWDLSLC---FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSC 127 (148)
Q Consensus 81 i~l~d~~~~---~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~ 127 (148)
+.+||...+ +. -.+..++|||+|..+++++..| .+.+||..
T Consensus 283 iiLyD~~~~~t~~~ka~~~P~~iaWHp~gai~~V~s~qG------elQ~FD~A 329 (545)
T PF11768_consen 283 IILYDTTRGVTLLAKAEFIPTLIAWHPDGAIFVVGSEQG------ELQCFDMA 329 (545)
T ss_pred EEEEEcCCCeeeeeeecccceEEEEcCCCcEEEEEcCCc------eEEEEEee
Confidence 999999888 22 5578899999999999999866 89999966
No 215
>PRK01742 tolB translocation protein TolB; Provisional
Probab=98.74 E-value=5.4e-07 Score=67.39 Aligned_cols=92 Identities=15% Similarity=0.126 Sum_probs=62.3
Q ss_pred EEEEEeCCCCccEEEEEecC---CeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEE-eCCCcEEE--EECCc
Q psy7062 15 ISTVFDSKHLVEMVAALGGY---QHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTG-GEDCRARI--WDLSL 88 (148)
Q Consensus 15 ~~~~~~~~~~~~~l~~~~~d---~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~-~~~~~i~l--~d~~~ 88 (148)
...+|+|+ |+.|+..+.+ ..+.+||+.++..+.+..+.++ ....+|+|||+.++.+ +.++...+ ||+..
T Consensus 207 ~~p~wSPD--G~~la~~s~~~~~~~i~i~dl~tg~~~~l~~~~g~---~~~~~wSPDG~~La~~~~~~g~~~Iy~~d~~~ 281 (429)
T PRK01742 207 MSPAWSPD--GSKLAYVSFENKKSQLVVHDLRSGARKVVASFRGH---NGAPAFSPDGSRLAFASSKDGVLNIYVMGANG 281 (429)
T ss_pred ccceEcCC--CCEEEEEEecCCCcEEEEEeCCCCceEEEecCCCc---cCceeECCCCCEEEEEEecCCcEEEEEEECCC
Confidence 56778887 7777775543 3699999988722233334333 3467999999988765 46776555 46655
Q ss_pred c----cc---ccceEEEEccCCCEEEEEec
Q psy7062 89 C----FI---QQVNALRITPDKQLLASAEE 111 (148)
Q Consensus 89 ~----~~---~~i~~~~~sp~~~~l~~~~~ 111 (148)
. +. .......|+|||+.|+.++.
T Consensus 282 ~~~~~lt~~~~~~~~~~wSpDG~~i~f~s~ 311 (429)
T PRK01742 282 GTPSQLTSGAGNNTEPSWSPDGQSILFTSD 311 (429)
T ss_pred CCeEeeccCCCCcCCEEECCCCCEEEEEEC
Confidence 4 22 45678999999998776653
No 216
>KOG2321|consensus
Probab=98.73 E-value=1.1e-07 Score=71.30 Aligned_cols=110 Identities=13% Similarity=0.224 Sum_probs=82.6
Q ss_pred EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEec------CCC-----CCEEEEEEccCCCEEEEEeCCCcEEE
Q psy7062 15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCE------GVS-----KNVVEVGFQEDGKWMFTGGEDCRARI 83 (148)
Q Consensus 15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~------~~~-----~~i~~~~~sp~~~~l~~~~~~~~i~l 83 (148)
+++...+- ..+|++|+.+|.|..||.++. .....+. .|. ..|++++|+.+|-.++.|+.+|.+.+
T Consensus 179 N~v~in~~--hgLla~Gt~~g~VEfwDpR~k--srv~~l~~~~~v~s~pg~~~~~svTal~F~d~gL~~aVGts~G~v~i 254 (703)
T KOG2321|consen 179 NVVSINEE--HGLLACGTEDGVVEFWDPRDK--SRVGTLDAASSVNSHPGGDAAPSVTALKFRDDGLHVAVGTSTGSVLI 254 (703)
T ss_pred eeeeecCc--cceEEecccCceEEEecchhh--hhheeeecccccCCCccccccCcceEEEecCCceeEEeeccCCcEEE
Confidence 44444444 789999899999999999987 5554443 122 34999999999999999999999999
Q ss_pred EECCcc---cc------ccceEEEEccC--CCEEEEEecCCceecCeeEEEeecCCCcceecc
Q psy7062 84 WDLSLC---FI------QQVNALRITPD--KQLLASAEELSCCYCGAAVFVYNSCYPAAVVAS 135 (148)
Q Consensus 84 ~d~~~~---~~------~~i~~~~~sp~--~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~ 135 (148)
||++.. +. .+|..+.|.+. ...+++... ..+++||-.++.+....
T Consensus 255 yDLRa~~pl~~kdh~~e~pi~~l~~~~~~~q~~v~S~Dk-------~~~kiWd~~~Gk~~asi 310 (703)
T KOG2321|consen 255 YDLRASKPLLVKDHGYELPIKKLDWQDTDQQNKVVSMDK-------RILKIWDECTGKPMASI 310 (703)
T ss_pred EEcccCCceeecccCCccceeeecccccCCCceEEecch-------HHhhhcccccCCceeec
Confidence 999987 21 88999999875 345555532 25899998877665443
No 217
>COG2319 FOG: WD40 repeat [General function prediction only]
Probab=98.71 E-value=1.2e-06 Score=62.96 Aligned_cols=99 Identities=22% Similarity=0.432 Sum_probs=78.5
Q ss_pred EEEEEec-CCeEEEEeCCC-CCCCceEEecCCCCCEEEEEEccCCCEEEEEeC-CCcEEEEECCcc-----cc---ccce
Q psy7062 27 MVAALGG-YQHIRMYDFGS-NNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGE-DCRARIWDLSLC-----FI---QQVN 95 (148)
Q Consensus 27 ~l~~~~~-d~~v~~~d~~~-~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~-~~~i~l~d~~~~-----~~---~~i~ 95 (148)
+++..+. ++.+.+||... . .....+..|...+..++++|+++.++.++. ++.+++|+.... +. ..+.
T Consensus 125 ~~~~~~~~d~~~~~~~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 202 (466)
T COG2319 125 ILLASSSLDGTVKLWDLSTPG--KLIRTLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGKPLSTLAGHTDPVS 202 (466)
T ss_pred EEeccCCCCccEEEEEecCCC--eEEEEEecCcccEEEEEECCCCCEEEecCCCCCceEEEEcCCCceEEeeccCCCceE
Confidence 4444344 88999999997 4 677888889999999999999998888885 999999999874 22 6799
Q ss_pred EEEEccCCC-EEEEEecCCceecCeeEEEeecCCCccee
Q psy7062 96 ALRITPDKQ-LLASAEELSCCYCGAAVFVYNSCYPAAVV 133 (148)
Q Consensus 96 ~~~~sp~~~-~l~~~~~d~~~~~~~~i~~~d~~~~~~~~ 133 (148)
+++|+|++. .+++++.|+ .|.+||........
T Consensus 203 ~~~~~~~~~~~~~~~~~d~------~i~~wd~~~~~~~~ 235 (466)
T COG2319 203 SLAFSPDGGLLIASGSSDG------TIRLWDLSTGKLLR 235 (466)
T ss_pred EEEEcCCcceEEEEecCCC------cEEEEECCCCcEEe
Confidence 999999998 555547777 78899877444433
No 218
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=98.70 E-value=1.6e-06 Score=62.52 Aligned_cols=107 Identities=14% Similarity=0.185 Sum_probs=74.4
Q ss_pred cEEEEEeCCCCccEEEEEe-cCCeEEEEeCCCCC-C-CceEEecCCCCCEEEEEEccCCCEEEEEe-CCCcEEEEECCcc
Q psy7062 14 QISTVFDSKHLVEMVAALG-GYQHIRMYDFGSNN-P-NPVINCEGVSKNVVEVGFQEDGKWMFTGG-EDCRARIWDLSLC 89 (148)
Q Consensus 14 ~~~~~~~~~~~~~~l~~~~-~d~~v~~~d~~~~~-~-~~~~~~~~~~~~i~~~~~sp~~~~l~~~~-~~~~i~l~d~~~~ 89 (148)
+..++++++ ++++++++ .++.+.+|++++.. . +.+..+. +......++++|+++++++++ .++.|.+||+.+.
T Consensus 82 p~~i~~~~~--g~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~-~~~~~~~~~~~p~g~~l~v~~~~~~~v~v~d~~~~ 158 (330)
T PRK11028 82 PTHISTDHQ--GRFLFSASYNANCVSVSPLDKDGIPVAPIQIIE-GLEGCHSANIDPDNRTLWVPCLKEDRIRLFTLSDD 158 (330)
T ss_pred ceEEEECCC--CCEEEEEEcCCCeEEEEEECCCCCCCCceeecc-CCCcccEeEeCCCCCEEEEeeCCCCEEEEEEECCC
Confidence 456777887 67666655 47799999997431 0 1223332 233456788999999886655 4689999999763
Q ss_pred --c--------c----ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCC
Q psy7062 90 --F--------I----QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCY 128 (148)
Q Consensus 90 --~--------~----~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~ 128 (148)
+ . .....+.|+|+++++++++.. .++|.+||+..
T Consensus 159 g~l~~~~~~~~~~~~g~~p~~~~~~pdg~~lyv~~~~-----~~~v~v~~~~~ 206 (330)
T PRK11028 159 GHLVAQEPAEVTTVEGAGPRHMVFHPNQQYAYCVNEL-----NSSVDVWQLKD 206 (330)
T ss_pred CcccccCCCceecCCCCCCceEEECCCCCEEEEEecC-----CCEEEEEEEeC
Confidence 1 1 445789999999999888761 23899999873
No 219
>KOG0280|consensus
Probab=98.67 E-value=5e-07 Score=62.89 Aligned_cols=110 Identities=13% Similarity=0.124 Sum_probs=82.4
Q ss_pred EEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEcc-CCCEEEEEeCCCcEEEEECCcc----c
Q psy7062 16 STVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQE-DGKWMFTGGEDCRARIWDLSLC----F 90 (148)
Q Consensus 16 ~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp-~~~~l~~~~~~~~i~l~d~~~~----~ 90 (148)
++..+.+..+.-++++-.+|.+.+-+......+.....+.|.-.....+|+. +.+.+.+|+.|+.+..||++.+ +
T Consensus 124 ~lslD~~~~~~~i~vs~s~G~~~~v~~t~~~le~vq~wk~He~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~~~i~ 203 (339)
T KOG0280|consen 124 ALSLDISTSGTKIFVSDSRGSISGVYETEMVLEKVQTWKVHEFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPKTFIW 203 (339)
T ss_pred eeEEEeeccCceEEEEcCCCcEEEEecceeeeeecccccccceeeeeeecccCCCceEEecCCCceEEEEEecCCcceee
Confidence 3333433335667776788888866666653344457888988888888886 5678999999999999999944 2
Q ss_pred c------ccceEEEEcc-CCCEEEEEecCCceecCeeEEEeecCCCcc
Q psy7062 91 I------QQVNALRITP-DKQLLASAEELSCCYCGAAVFVYNSCYPAA 131 (148)
Q Consensus 91 ~------~~i~~~~~sp-~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~ 131 (148)
. ..+.++.-+| .+.++++|+-|. .|++||.++...
T Consensus 204 ~n~kvH~~GV~SI~ss~~~~~~I~TGsYDe------~i~~~DtRnm~k 245 (339)
T KOG0280|consen 204 HNSKVHTSGVVSIYSSPPKPTYIATGSYDE------CIRVLDTRNMGK 245 (339)
T ss_pred ecceeeecceEEEecCCCCCceEEEecccc------ceeeeehhcccC
Confidence 2 6788887776 788999999888 999999996543
No 220
>KOG0642|consensus
Probab=98.67 E-value=6.2e-07 Score=67.00 Aligned_cols=112 Identities=15% Similarity=0.151 Sum_probs=83.8
Q ss_pred EEEEEeCCCCccEEEEEecCCeEEEEeCCCCC-------C-CceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEEC
Q psy7062 15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNN-------P-NPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDL 86 (148)
Q Consensus 15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~-------~-~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~ 86 (148)
+.++..-..+++.+++|+-|++|+.|++.... . .....+.+|+..+..+++|+....|++++.||++++|+.
T Consensus 346 PVl~v~v~~n~~~~ysgg~Dg~I~~w~~p~n~dp~ds~dp~vl~~~l~Ghtdavw~l~~s~~~~~Llscs~DgTvr~w~~ 425 (577)
T KOG0642|consen 346 PVLCVVVPSNGEHCYSGGIDGTIRCWNLPPNQDPDDSYDPSVLSGTLLGHTDAVWLLALSSTKDRLLSCSSDGTVRLWEP 425 (577)
T ss_pred ceEEEEecCCceEEEeeccCceeeeeccCCCCCcccccCcchhccceeccccceeeeeecccccceeeecCCceEEeecc
Confidence 33333333449999999999999999775221 0 123567899999999999999989999999999999987
Q ss_pred Ccc-------------------------------------------------cc----------ccceEEEEccCCCEEE
Q psy7062 87 SLC-------------------------------------------------FI----------QQVNALRITPDKQLLA 107 (148)
Q Consensus 87 ~~~-------------------------------------------------~~----------~~i~~~~~sp~~~~l~ 107 (148)
... |. ..+..+.++|.....+
T Consensus 426 ~~~~~~~f~~~~e~g~Plsvd~~ss~~a~~~~s~~~~~~~~~~~ev~s~~~~~~s~~~~~~~~~~~in~vVs~~~~~~~~ 505 (577)
T KOG0642|consen 426 TEESPCTFGEPKEHGYPLSVDRTSSRPAHSLASFRFGYTSIDDMEVVSDLLIFESSASPGPRRYPQINKVVSHPTADITF 505 (577)
T ss_pred CCcCccccCCccccCCcceEeeccchhHhhhhhcccccccchhhhhhhheeeccccCCCcccccCccceEEecCCCCeeE
Confidence 533 00 3355677788888888
Q ss_pred EEecCCceecCeeEEEeecCCCcce
Q psy7062 108 SAEELSCCYCGAAVFVYNSCYPAAV 132 (148)
Q Consensus 108 ~~~~d~~~~~~~~i~~~d~~~~~~~ 132 (148)
++-.|+ .|+++|..+....
T Consensus 506 ~~hed~------~Ir~~dn~~~~~l 524 (577)
T KOG0642|consen 506 TAHEDR------SIRFFDNKTGKIL 524 (577)
T ss_pred ecccCC------ceecccccccccc
Confidence 888877 8889887765543
No 221
>PRK03629 tolB translocation protein TolB; Provisional
Probab=98.67 E-value=2.3e-06 Score=64.08 Aligned_cols=107 Identities=13% Similarity=0.088 Sum_probs=71.5
Q ss_pred EEEEEeCCCCccEEEEEec---CCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEE-eCCC--cEEEEECCc
Q psy7062 15 ISTVFDSKHLVEMVAALGG---YQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTG-GEDC--RARIWDLSL 88 (148)
Q Consensus 15 ~~~~~~~~~~~~~l~~~~~---d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~-~~~~--~i~l~d~~~ 88 (148)
...+|+|+ |+.|+..+. +..+.+||+.++ +. ..+...........|+|||+.++.. +.++ .|++||+.+
T Consensus 202 ~~p~wSPD--G~~la~~s~~~g~~~i~i~dl~~G--~~-~~l~~~~~~~~~~~~SPDG~~La~~~~~~g~~~I~~~d~~t 276 (429)
T PRK03629 202 MSPAWSPD--GSKLAYVTFESGRSALVIQTLANG--AV-RQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLAS 276 (429)
T ss_pred eeeEEcCC--CCEEEEEEecCCCcEEEEEECCCC--Ce-EEccCCCCCcCCeEECCCCCEEEEEEcCCCCcEEEEEECCC
Confidence 47888888 676665442 347999999887 32 2222223334568999999977654 4444 588999987
Q ss_pred c----cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCC
Q psy7062 89 C----FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYP 129 (148)
Q Consensus 89 ~----~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~ 129 (148)
+ +. .......|+|||+.|+.++.++ +...|+.+|+...
T Consensus 277 g~~~~lt~~~~~~~~~~wSPDG~~I~f~s~~~---g~~~Iy~~d~~~g 321 (429)
T PRK03629 277 GQIRQVTDGRSNNTEPTWFPDSQNLAYTSDQA---GRPQVYKVNINGG 321 (429)
T ss_pred CCEEEccCCCCCcCceEECCCCCEEEEEeCCC---CCceEEEEECCCC
Confidence 6 22 4567889999999888777543 1335667776543
No 222
>KOG1524|consensus
Probab=98.63 E-value=1e-07 Score=71.12 Aligned_cols=94 Identities=15% Similarity=0.176 Sum_probs=72.8
Q ss_pred ccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc---------------
Q psy7062 25 VEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC--------------- 89 (148)
Q Consensus 25 ~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~--------------- 89 (148)
.+.|+.+++||...+.+-. + +..+...+|.+.+.+-.|+|||..+++++.||.|++|.-...
T Consensus 75 ~d~~~i~s~DGkf~il~k~-~--rVE~sv~AH~~A~~~gRW~~dGtgLlt~GEDG~iKiWSrsGMLRStl~Q~~~~v~c~ 151 (737)
T KOG1524|consen 75 SDTLLICSNDGRFVILNKS-A--RVERSISAHAAAISSGRWSPDGAGLLTAGEDGVIKIWSRSGMLRSTVVQNEESIRCA 151 (737)
T ss_pred cceEEEEcCCceEEEeccc-c--hhhhhhhhhhhhhhhcccCCCCceeeeecCCceEEEEeccchHHHHHhhcCceeEEE
Confidence 4556676999998886654 3 577788899999999999999999999999999999986433
Q ss_pred ---------------------cc------------ccceEEEEccCCCEEEEEecCCceecCeeEEEeecC
Q psy7062 90 ---------------------FI------------QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSC 127 (148)
Q Consensus 90 ---------------------~~------------~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~ 127 (148)
+. +-|.++.|++....+++|++|- +.++||-.
T Consensus 152 ~W~p~S~~vl~c~g~h~~IKpL~~n~k~i~WkAHDGiiL~~~W~~~s~lI~sgGED~------kfKvWD~~ 216 (737)
T KOG1524|consen 152 RWAPNSNSIVFCQGGHISIKPLAANSKIIRWRAHDGLVLSLSWSTQSNIIASGGEDF------RFKIWDAQ 216 (737)
T ss_pred EECCCCCceEEecCCeEEEeecccccceeEEeccCcEEEEeecCccccceeecCCce------eEEeeccc
Confidence 00 4466677777777777777766 77788844
No 223
>PRK03629 tolB translocation protein TolB; Provisional
Probab=98.63 E-value=3.2e-06 Score=63.33 Aligned_cols=108 Identities=9% Similarity=0.047 Sum_probs=72.4
Q ss_pred EEEEEeCCCCccEEEEE-ecCC--eEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeC-CCc--EEEEECCc
Q psy7062 15 ISTVFDSKHLVEMVAAL-GGYQ--HIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGE-DCR--ARIWDLSL 88 (148)
Q Consensus 15 ~~~~~~~~~~~~~l~~~-~~d~--~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~-~~~--i~l~d~~~ 88 (148)
...+|+|+ |+.|+.. +.++ .|.+||++++ + ...+..+...+....|+|||+.++..+. ++. +..+|+..
T Consensus 246 ~~~~~SPD--G~~La~~~~~~g~~~I~~~d~~tg--~-~~~lt~~~~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~~ 320 (429)
T PRK03629 246 GAPAFSPD--GSKLAFALSKTGSLNLYVMDLASG--Q-IRQVTDGRSNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNING 320 (429)
T ss_pred CCeEECCC--CCEEEEEEcCCCCcEEEEEECCCC--C-EEEccCCCCCcCceEECCCCCEEEEEeCCCCCceEEEEECCC
Confidence 35678888 6666543 3344 5888999886 3 3444444556788999999998866654 344 44456665
Q ss_pred c----cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062 89 C----FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA 130 (148)
Q Consensus 89 ~----~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~ 130 (148)
+ +. .......|+|||++++..+.++ ....|.+||+.+..
T Consensus 321 g~~~~lt~~~~~~~~~~~SpDG~~Ia~~~~~~---g~~~I~~~dl~~g~ 366 (429)
T PRK03629 321 GAPQRITWEGSQNQDADVSSDGKFMVMVSSNG---GQQHIAKQDLATGG 366 (429)
T ss_pred CCeEEeecCCCCccCEEECCCCCEEEEEEccC---CCceEEEEECCCCC
Confidence 4 22 3456789999999988876543 23468889987554
No 224
>PRK01742 tolB translocation protein TolB; Provisional
Probab=98.62 E-value=6.7e-07 Score=66.89 Aligned_cols=89 Identities=17% Similarity=0.147 Sum_probs=66.0
Q ss_pred CCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCC---CcEEEEECCcc----cc---ccceEEEEccCC
Q psy7062 34 YQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGED---CRARIWDLSLC----FI---QQVNALRITPDK 103 (148)
Q Consensus 34 d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~---~~i~l~d~~~~----~~---~~i~~~~~sp~~ 103 (148)
+..+.+||.+.. . ...+..+...+...+|+|||+.++..+.+ ..+++||+.++ +. ......+|+|||
T Consensus 183 ~~~i~i~d~dg~--~-~~~lt~~~~~v~~p~wSPDG~~la~~s~~~~~~~i~i~dl~tg~~~~l~~~~g~~~~~~wSPDG 259 (429)
T PRK01742 183 PYEVRVADYDGF--N-QFIVNRSSQPLMSPAWSPDGSKLAYVSFENKKSQLVVHDLRSGARKVVASFRGHNGAPAFSPDG 259 (429)
T ss_pred eEEEEEECCCCC--C-ceEeccCCCccccceEcCCCCEEEEEEecCCCcEEEEEeCCCCceEEEecCCCccCceeECCCC
Confidence 468999999876 3 45566677889999999999999887654 46999999876 22 344578999999
Q ss_pred CEEEEEe-cCCceecCeeEEEeecCCC
Q psy7062 104 QLLASAE-ELSCCYCGAAVFVYNSCYP 129 (148)
Q Consensus 104 ~~l~~~~-~d~~~~~~~~i~~~d~~~~ 129 (148)
+.|+.+. .++ ...|++||+...
T Consensus 260 ~~La~~~~~~g----~~~Iy~~d~~~~ 282 (429)
T PRK01742 260 SRLAFASSKDG----VLNIYVMGANGG 282 (429)
T ss_pred CEEEEEEecCC----cEEEEEEECCCC
Confidence 9888765 455 335667776543
No 225
>PRK04922 tolB translocation protein TolB; Provisional
Probab=98.61 E-value=2.3e-06 Score=64.12 Aligned_cols=107 Identities=12% Similarity=0.074 Sum_probs=71.3
Q ss_pred EEEEEeCCCCccEEEEEecC---CeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEE-EEeCCC--cEEEEECCc
Q psy7062 15 ISTVFDSKHLVEMVAALGGY---QHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMF-TGGEDC--RARIWDLSL 88 (148)
Q Consensus 15 ~~~~~~~~~~~~~l~~~~~d---~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~-~~~~~~--~i~l~d~~~ 88 (148)
...+|+|+ ++.++..+.+ ..+.+||+.++ +. ..+..........+|+|||+.++ +.+.++ .|++||+.+
T Consensus 207 ~~p~wSpD--g~~la~~s~~~~~~~l~~~dl~~g--~~-~~l~~~~g~~~~~~~SpDG~~l~~~~s~~g~~~Iy~~d~~~ 281 (433)
T PRK04922 207 LSPAWSPD--GKKLAYVSFERGRSAIYVQDLATG--QR-ELVASFRGINGAPSFSPDGRRLALTLSRDGNPEIYVMDLGS 281 (433)
T ss_pred ccccCCCC--CCEEEEEecCCCCcEEEEEECCCC--CE-EEeccCCCCccCceECCCCCEEEEEEeCCCCceEEEEECCC
Confidence 35567777 7777765533 36999999887 32 23333344455789999999764 455555 599999987
Q ss_pred c----cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCC
Q psy7062 89 C----FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYP 129 (148)
Q Consensus 89 ~----~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~ 129 (148)
+ +. .......|+|||++|+.++... +...|+++|+...
T Consensus 282 g~~~~lt~~~~~~~~~~~spDG~~l~f~sd~~---g~~~iy~~dl~~g 326 (433)
T PRK04922 282 RQLTRLTNHFGIDTEPTWAPDGKSIYFTSDRG---GRPQIYRVAASGG 326 (433)
T ss_pred CCeEECccCCCCccceEECCCCCEEEEEECCC---CCceEEEEECCCC
Confidence 7 22 3346789999999888776432 1346777777544
No 226
>KOG0771|consensus
Probab=98.59 E-value=6.3e-07 Score=64.72 Aligned_cols=105 Identities=22% Similarity=0.316 Sum_probs=79.8
Q ss_pred cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCC---------------------C---c------------eEEe----
Q psy7062 14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNP---------------------N---P------------VINC---- 53 (148)
Q Consensus 14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~---------------------~---~------------~~~~---- 53 (148)
...+.|+++ |++|++-+.| ..++|+.+++.. . . +...
T Consensus 189 V~DL~FS~d--gk~lasig~d-~~~VW~~~~g~~~a~~t~~~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~ 265 (398)
T KOG0771|consen 189 VKDLDFSPD--GKFLASIGAD-SARVWSVNTGAALARKTPFSKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISL 265 (398)
T ss_pred cccceeCCC--CcEEEEecCC-ceEEEEeccCchhhhcCCcccchhhhhceecccCCCceEEEEEecCCCCceeEEEeee
Confidence 457788888 9999998888 999999987710 0 0 0000
Q ss_pred -c-----------CCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----cc----ccceEEEEccCCCEEEEEecC
Q psy7062 54 -E-----------GVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-----FI----QQVNALRITPDKQLLASAEEL 112 (148)
Q Consensus 54 -~-----------~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-----~~----~~i~~~~~sp~~~~l~~~~~d 112 (148)
. .....|++++++++|++++.|+.+|.+-+++..+. .+ .-|+.+.|+|+.+.+++.+.+
T Consensus 266 w~~~~~l~~~~~~~~~~siSsl~VS~dGkf~AlGT~dGsVai~~~~~lq~~~~vk~aH~~~VT~ltF~Pdsr~~~svSs~ 345 (398)
T KOG0771|consen 266 WSGSNFLRLRKKIKRFKSISSLAVSDDGKFLALGTMDGSVAIYDAKSLQRLQYVKEAHLGFVTGLTFSPDSRYLASVSSD 345 (398)
T ss_pred eccccccchhhhhhccCcceeEEEcCCCcEEEEeccCCcEEEEEeceeeeeEeehhhheeeeeeEEEcCCcCcccccccC
Confidence 0 01236899999999999999999999999999887 22 779999999999999998775
Q ss_pred CceecCeeEEEeecC
Q psy7062 113 SCCYCGAAVFVYNSC 127 (148)
Q Consensus 113 ~~~~~~~~i~~~d~~ 127 (148)
- .+.+..+.
T Consensus 346 ~------~~~v~~l~ 354 (398)
T KOG0771|consen 346 N------EAAVTKLA 354 (398)
T ss_pred C------ceeEEEEe
Confidence 5 55555544
No 227
>PRK02889 tolB translocation protein TolB; Provisional
Probab=98.58 E-value=2.7e-06 Score=63.63 Aligned_cols=106 Identities=9% Similarity=0.083 Sum_probs=68.0
Q ss_pred EEEEEeCCCCccEEEEEecC---CeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEE-EEeCCCcEEEEE--CCc
Q psy7062 15 ISTVFDSKHLVEMVAALGGY---QHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMF-TGGEDCRARIWD--LSL 88 (148)
Q Consensus 15 ~~~~~~~~~~~~~l~~~~~d---~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~-~~~~~~~i~l~d--~~~ 88 (148)
...+|+|+ ++.|+..+.+ ..+.+||+.++ +.. .+...........|+|||+.++ +.+.++...+|. +..
T Consensus 199 ~~p~wSPD--G~~la~~s~~~~~~~I~~~dl~~g--~~~-~l~~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~ 273 (427)
T PRK02889 199 ISPAWSPD--GTKLAYVSFESKKPVVYVHDLATG--RRR-VVANFKGSNSAPAWSPDGRTLAVALSRDGNSQIYTVNADG 273 (427)
T ss_pred ccceEcCC--CCEEEEEEccCCCcEEEEEECCCC--CEE-EeecCCCCccceEECCCCCEEEEEEccCCCceEEEEECCC
Confidence 46778887 6766664533 35999999887 432 3333344566889999999775 567777666654 444
Q ss_pred c----cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCC
Q psy7062 89 C----FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCY 128 (148)
Q Consensus 89 ~----~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~ 128 (148)
. +. .......|+|||+.|+..+..+ +...|+.+|...
T Consensus 274 ~~~~~lt~~~~~~~~~~wSpDG~~l~f~s~~~---g~~~Iy~~~~~~ 317 (427)
T PRK02889 274 SGLRRLTQSSGIDTEPFFSPDGRSIYFTSDRG---GAPQIYRMPASG 317 (427)
T ss_pred CCcEECCCCCCCCcCeEEcCCCCEEEEEecCC---CCcEEEEEECCC
Confidence 3 22 3356688999999888766432 123455555443
No 228
>KOG3914|consensus
Probab=98.57 E-value=7.6e-07 Score=64.04 Aligned_cols=88 Identities=15% Similarity=0.181 Sum_probs=65.4
Q ss_pred eEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-------cc--ccceEEEEccCCCEE
Q psy7062 36 HIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-------FI--QQVNALRITPDKQLL 106 (148)
Q Consensus 36 ~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-------~~--~~i~~~~~sp~~~~l 106 (148)
.+.+|....+ ....+-+|-+.++.++|+||++.++++++|..|++-..... +. .-+..++.- +++.|
T Consensus 133 ~~di~s~~~~---~~~~~lGhvSml~dVavS~D~~~IitaDRDEkIRvs~ypa~f~IesfclGH~eFVS~isl~-~~~~L 208 (390)
T KOG3914|consen 133 SFDILSADSG---RCEPILGHVSMLLDVAVSPDDQFIITADRDEKIRVSRYPATFVIESFCLGHKEFVSTISLT-DNYLL 208 (390)
T ss_pred eeeeeccccc---CcchhhhhhhhhheeeecCCCCEEEEecCCceEEEEecCcccchhhhccccHhheeeeeec-cCcee
Confidence 4555555443 23344579999999999999999999999999998877654 21 344445554 44558
Q ss_pred EEEecCCceecCeeEEEeecCCCccee
Q psy7062 107 ASAEELSCCYCGAAVFVYNSCYPAAVV 133 (148)
Q Consensus 107 ~~~~~d~~~~~~~~i~~~d~~~~~~~~ 133 (148)
++++.|+ ++++||+++.+...
T Consensus 209 lS~sGD~------tlr~Wd~~sgk~L~ 229 (390)
T KOG3914|consen 209 LSGSGDK------TLRLWDITSGKLLD 229 (390)
T ss_pred eecCCCC------cEEEEecccCCccc
Confidence 9999988 99999999877654
No 229
>KOG0650|consensus
Probab=98.56 E-value=2.7e-07 Score=69.54 Aligned_cols=95 Identities=18% Similarity=0.243 Sum_probs=79.0
Q ss_pred cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----
Q psy7062 14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC---- 89 (148)
Q Consensus 14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~---- 89 (148)
..++.|+|. ..+|++ +....|++||+... +.+..+......|.+++++|.|..++.++.|+.+..||+.-.
T Consensus 569 vq~v~FHPs--~p~lfV-aTq~~vRiYdL~kq--elvKkL~tg~kwiS~msihp~GDnli~gs~d~k~~WfDldlsskPy 643 (733)
T KOG0650|consen 569 VQRVKFHPS--KPYLFV-ATQRSVRIYDLSKQ--ELVKKLLTGSKWISSMSIHPNGDNLILGSYDKKMCWFDLDLSSKPY 643 (733)
T ss_pred eeEEEecCC--CceEEE-EeccceEEEehhHH--HHHHHHhcCCeeeeeeeecCCCCeEEEecCCCeeEEEEcccCcchh
Confidence 457778887 556666 34689999999876 666666666788999999999999999999999999999755
Q ss_pred --cc---ccceEEEEccCCCEEEEEecCC
Q psy7062 90 --FI---QQVNALRITPDKQLLASAEELS 113 (148)
Q Consensus 90 --~~---~~i~~~~~sp~~~~l~~~~~d~ 113 (148)
+. ..+++++||+.-.++++++.|+
T Consensus 644 k~lr~H~~avr~Va~H~ryPLfas~sdDg 672 (733)
T KOG0650|consen 644 KTLRLHEKAVRSVAFHKRYPLFASGSDDG 672 (733)
T ss_pred HHhhhhhhhhhhhhhccccceeeeecCCC
Confidence 22 7799999999999999999988
No 230
>PRK04922 tolB translocation protein TolB; Provisional
Probab=98.55 E-value=5.3e-06 Score=62.17 Aligned_cols=107 Identities=15% Similarity=0.103 Sum_probs=72.3
Q ss_pred EEEEeCCCCccEE-EEEecCC--eEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEe-CCCc--EEEEECCcc
Q psy7062 16 STVFDSKHLVEMV-AALGGYQ--HIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGG-EDCR--ARIWDLSLC 89 (148)
Q Consensus 16 ~~~~~~~~~~~~l-~~~~~d~--~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~-~~~~--i~l~d~~~~ 89 (148)
..+|+|+ |+.+ ++.+.++ .|.+||+.++ + ...+..+.......+|+|||+.++..+ .++. +.++|+..+
T Consensus 252 ~~~~SpD--G~~l~~~~s~~g~~~Iy~~d~~~g--~-~~~lt~~~~~~~~~~~spDG~~l~f~sd~~g~~~iy~~dl~~g 326 (433)
T PRK04922 252 APSFSPD--GRRLALTLSRDGNPEIYVMDLGSR--Q-LTRLTNHFGIDTEPTWAPDGKSIYFTSDRGGRPQIYRVAASGG 326 (433)
T ss_pred CceECCC--CCEEEEEEeCCCCceEEEEECCCC--C-eEECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCC
Confidence 5678887 5544 4445454 6999999887 3 445555555556789999999887665 4444 666676655
Q ss_pred ----cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062 90 ----FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA 130 (148)
Q Consensus 90 ----~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~ 130 (148)
+. ......+|+|+|++++..+.++ ....|.+||+.+..
T Consensus 327 ~~~~lt~~g~~~~~~~~SpDG~~Ia~~~~~~---~~~~I~v~d~~~g~ 371 (433)
T PRK04922 327 SAERLTFQGNYNARASVSPDGKKIAMVHGSG---GQYRIAVMDLSTGS 371 (433)
T ss_pred CeEEeecCCCCccCEEECCCCCEEEEEECCC---CceeEEEEECCCCC
Confidence 22 3345689999999988876533 23479999987554
No 231
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=98.52 E-value=1.6e-05 Score=58.52 Aligned_cols=107 Identities=13% Similarity=0.203 Sum_probs=75.1
Q ss_pred cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEe-CCCcEEEEECCcc--c
Q psy7062 14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGG-EDCRARIWDLSLC--F 90 (148)
Q Consensus 14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~-~~~~i~l~d~~~~--~ 90 (148)
|...+|+++ ++++++++.|+.+.++|+.+. +.+.+++. .....++++|+||+++++++ .++.+.++|.++. +
T Consensus 39 h~~~~~s~D--gr~~yv~~rdg~vsviD~~~~--~~v~~i~~-G~~~~~i~~s~DG~~~~v~n~~~~~v~v~D~~tle~v 113 (369)
T PF02239_consen 39 HAGLKFSPD--GRYLYVANRDGTVSVIDLATG--KVVATIKV-GGNPRGIAVSPDGKYVYVANYEPGTVSVIDAETLEPV 113 (369)
T ss_dssp EEEEE-TT---SSEEEEEETTSEEEEEETTSS--SEEEEEE--SSEEEEEEE--TTTEEEEEEEETTEEEEEETTT--EE
T ss_pred eeEEEecCC--CCEEEEEcCCCeEEEEECCcc--cEEEEEec-CCCcceEEEcCCCCEEEEEecCCCceeEeccccccce
Confidence 345667777 788888899999999999998 88888874 55678899999999988776 5789999999887 1
Q ss_pred c-------------ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062 91 I-------------QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA 130 (148)
Q Consensus 91 ~-------------~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~ 130 (148)
+ .++..+.-+|....++..-.|. +.|.+.|.....
T Consensus 114 ~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd~-----~~I~vVdy~d~~ 161 (369)
T PF02239_consen 114 KTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLKDT-----GEIWVVDYSDPK 161 (369)
T ss_dssp EEEE--EE-TTTS---EEEEEE-SSSSEEEEEETTT-----TEEEEEETTTSS
T ss_pred eecccccccccccCCCceeEEecCCCCEEEEEEccC-----CeEEEEEecccc
Confidence 1 3556777788888666655432 278888877654
No 232
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=98.52 E-value=7.5e-06 Score=60.78 Aligned_cols=107 Identities=12% Similarity=0.093 Sum_probs=71.3
Q ss_pred EEEEeCCCCccEEEEEecC---CeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEE-EEeCCC--cEEEEECCcc
Q psy7062 16 STVFDSKHLVEMVAALGGY---QHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMF-TGGEDC--RARIWDLSLC 89 (148)
Q Consensus 16 ~~~~~~~~~~~~l~~~~~d---~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~-~~~~~~--~i~l~d~~~~ 89 (148)
..+|+|+ ++.|+....+ ..+.+||+.++ +. ..+..+...+..++|+|||+.++ +.+.++ .+++||+.+.
T Consensus 194 ~p~~Spd--g~~la~~~~~~~~~~i~v~d~~~g--~~-~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~i~~~d~~~~ 268 (417)
T TIGR02800 194 SPAWSPD--GQKLAYVSFESGKPEIYVQDLATG--QR-EKVASFPGMNGAPAFSPDGSKLAVSLSKDGNPDIYVMDLDGK 268 (417)
T ss_pred cccCCCC--CCEEEEEEcCCCCcEEEEEECCCC--CE-EEeecCCCCccceEECCCCCEEEEEECCCCCccEEEEECCCC
Confidence 3456666 7777765543 37999999887 33 33333555566789999998765 444443 5888998776
Q ss_pred ----cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062 90 ----FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA 130 (148)
Q Consensus 90 ----~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~ 130 (148)
+. .......|+|+++.|+.++..+ ....|+++|+....
T Consensus 269 ~~~~l~~~~~~~~~~~~s~dg~~l~~~s~~~---g~~~iy~~d~~~~~ 313 (417)
T TIGR02800 269 QLTRLTNGPGIDTEPSWSPDGKSIAFTSDRG---GSPQIYMMDADGGE 313 (417)
T ss_pred CEEECCCCCCCCCCEEECCCCCEEEEEECCC---CCceEEEEECCCCC
Confidence 22 3345678999999887766433 23468888876543
No 233
>KOG2139|consensus
Probab=98.50 E-value=2.1e-06 Score=61.49 Aligned_cols=108 Identities=15% Similarity=0.220 Sum_probs=78.3
Q ss_pred cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEec-CCCCCEEEEEEccCC-CEEEEEeCCCcEEEEECCcc--
Q psy7062 14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCE-GVSKNVVEVGFQEDG-KWMFTGGEDCRARIWDLSLC-- 89 (148)
Q Consensus 14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~-~~~~~i~~~~~sp~~-~~l~~~~~~~~i~l~d~~~~-- 89 (148)
-..++|++. -.-++++..|.+|++||-+.. .+ ..++ .....|++++|.|.+ +.++.++.. -|.+|.....
T Consensus 101 lr~~aWhqH--~~~fava~nddvVriy~ksst--~p-t~Lks~sQrnvtclawRPlsaselavgCr~-gIciW~~s~tln 174 (445)
T KOG2139|consen 101 LRGVAWHQH--IIAFAVATNDDVVRIYDKSST--CP-TKLKSVSQRNVTCLAWRPLSASELAVGCRA-GICIWSDSRTLN 174 (445)
T ss_pred eeeEeechh--hhhhhhhccCcEEEEeccCCC--CC-ceecchhhcceeEEEeccCCcceeeeeecc-eeEEEEcCcccc
Confidence 467888875 456778799999999998875 22 2222 235679999999965 455666544 5888876432
Q ss_pred ---------------cc----ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcce
Q psy7062 90 ---------------FI----QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAV 132 (148)
Q Consensus 90 ---------------~~----~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~ 132 (148)
++ .++.+++|.+||..+++++-+ ...|.+||+.+...+
T Consensus 175 ~~r~~~~~s~~~~qvl~~pgh~pVtsmqwn~dgt~l~tAS~g-----sssi~iWdpdtg~~~ 231 (445)
T KOG2139|consen 175 ANRNIRMMSTHHLQVLQDPGHNPVTSMQWNEDGTILVTASFG-----SSSIMIWDPDTGQKI 231 (445)
T ss_pred cccccccccccchhheeCCCCceeeEEEEcCCCCEEeecccC-----cceEEEEcCCCCCcc
Confidence 22 789999999999999998863 337999999876543
No 234
>PRK00178 tolB translocation protein TolB; Provisional
Probab=98.50 E-value=1.1e-05 Score=60.36 Aligned_cols=108 Identities=10% Similarity=0.002 Sum_probs=70.9
Q ss_pred EEEEEeCCCCccEEEEEecC---CeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEE-EEeCCC--cEEEEECCc
Q psy7062 15 ISTVFDSKHLVEMVAALGGY---QHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMF-TGGEDC--RARIWDLSL 88 (148)
Q Consensus 15 ~~~~~~~~~~~~~l~~~~~d---~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~-~~~~~~--~i~l~d~~~ 88 (148)
....|+|+ |+.|+..+.+ ..+.+||++++ +. ..+...........|+|||+.++ +.+.++ .|+++|+.+
T Consensus 202 ~~p~wSpD--G~~la~~s~~~~~~~l~~~~l~~g--~~-~~l~~~~g~~~~~~~SpDG~~la~~~~~~g~~~Iy~~d~~~ 276 (430)
T PRK00178 202 LSPRWSPD--GKRIAYVSFEQKRPRIFVQNLDTG--RR-EQITNFEGLNGAPAWSPDGSKLAFVLSKDGNPEIYVMDLAS 276 (430)
T ss_pred eeeeECCC--CCEEEEEEcCCCCCEEEEEECCCC--CE-EEccCCCCCcCCeEECCCCCEEEEEEccCCCceEEEEECCC
Confidence 45677887 6666654533 36889999887 32 23333334455689999999776 444454 588889987
Q ss_pred c----cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062 89 C----FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA 130 (148)
Q Consensus 89 ~----~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~ 130 (148)
+ +. .......|+||++.++..+..+ +...|+++|+...+
T Consensus 277 ~~~~~lt~~~~~~~~~~~spDg~~i~f~s~~~---g~~~iy~~d~~~g~ 322 (430)
T PRK00178 277 RQLSRVTNHPAIDTEPFWGKDGRTLYFTSDRG---GKPQIYKVNVNGGR 322 (430)
T ss_pred CCeEEcccCCCCcCCeEECCCCCEEEEEECCC---CCceEEEEECCCCC
Confidence 6 22 3455678999999877766422 23468888876543
No 235
>PRK02889 tolB translocation protein TolB; Provisional
Probab=98.50 E-value=5.8e-06 Score=61.90 Aligned_cols=108 Identities=18% Similarity=0.201 Sum_probs=70.4
Q ss_pred EEEEEeCCCCccEEE-EEecCCeEEEEeC--CCCCCCceEEecCCCCCEEEEEEccCCCEEEEEe-CCCcEEEEEC--Cc
Q psy7062 15 ISTVFDSKHLVEMVA-ALGGYQHIRMYDF--GSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGG-EDCRARIWDL--SL 88 (148)
Q Consensus 15 ~~~~~~~~~~~~~l~-~~~~d~~v~~~d~--~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~-~~~~i~l~d~--~~ 88 (148)
...+|+|+ |+.++ +.+.++...+|.+ .++ ....+..+........|+|||+.++..+ .++...+|.+ ..
T Consensus 243 ~~~~~SPD--G~~la~~~~~~g~~~Iy~~d~~~~---~~~~lt~~~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~~~ 317 (427)
T PRK02889 243 SAPAWSPD--GRTLAVALSRDGNSQIYTVNADGS---GLRRLTQSSGIDTEPFFSPDGRSIYFTSDRGGAPQIYRMPASG 317 (427)
T ss_pred cceEECCC--CCEEEEEEccCCCceEEEEECCCC---CcEECCCCCCCCcCeEEcCCCCEEEEEecCCCCcEEEEEECCC
Confidence 46788888 65554 4466776666654 443 3455554555566788999999877654 3456666654 33
Q ss_pred c----c--c-ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062 89 C----F--I-QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA 130 (148)
Q Consensus 89 ~----~--~-~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~ 130 (148)
+ + . .......|+|+|++++..+.++ +...|.+||+.+..
T Consensus 318 g~~~~lt~~g~~~~~~~~SpDG~~Ia~~s~~~---g~~~I~v~d~~~g~ 363 (427)
T PRK02889 318 GAAQRVTFTGSYNTSPRISPDGKLLAYISRVG---GAFKLYVQDLATGQ 363 (427)
T ss_pred CceEEEecCCCCcCceEECCCCCEEEEEEccC---CcEEEEEEECCCCC
Confidence 3 2 2 3345678999999998877654 23469999987654
No 236
>KOG4547|consensus
Probab=98.50 E-value=4.3e-06 Score=62.80 Aligned_cols=109 Identities=16% Similarity=0.102 Sum_probs=93.0
Q ss_pred CccEEEEEecCCeEEEEeCCCCCCCceEEec--CCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----cc---cc
Q psy7062 24 LVEMVAALGGYQHIRMYDFGSNNPNPVINCE--GVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-----FI---QQ 93 (148)
Q Consensus 24 ~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~--~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-----~~---~~ 93 (148)
...+++-|...|.+.+|++..+ +..+.+. .|...|.++.++.+-..+.+++-|..+..|+.+.. +. ..
T Consensus 69 ~t~~lvlgt~~g~v~~ys~~~g--~it~~~st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~~~~~~~~~~~~~ 146 (541)
T KOG4547|consen 69 DTSMLVLGTPQGSVLLYSVAGG--EITAKLSTDKHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEKVIIRIWKEQKPL 146 (541)
T ss_pred CceEEEeecCCccEEEEEecCC--eEEEEEecCCCCCcceeeecccccCceEecCCceeEEEEecccceeeeeeccCCCc
Confidence 3567888888899999999988 6666665 58899999999999999999999999999999887 22 66
Q ss_pred ceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceeccCcccCcc
Q psy7062 94 VNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVASNTLVKPQ 142 (148)
Q Consensus 94 i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~ 142 (148)
+.+++.+||+..++++++ +|++||+.+.+.+....++..|-
T Consensus 147 ~~sl~is~D~~~l~~as~--------~ik~~~~~~kevv~~ftgh~s~v 187 (541)
T KOG4547|consen 147 VSSLCISPDGKILLTASR--------QIKVLDIETKEVVITFTGHGSPV 187 (541)
T ss_pred cceEEEcCCCCEEEeccc--------eEEEEEccCceEEEEecCCCcce
Confidence 888999999999999998 99999999888888877776664
No 237
>PRK05137 tolB translocation protein TolB; Provisional
Probab=98.49 E-value=8.2e-06 Score=61.21 Aligned_cols=89 Identities=13% Similarity=0.072 Sum_probs=66.2
Q ss_pred CeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeC---CCcEEEEECCcc----cc---ccceEEEEccCCC
Q psy7062 35 QHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGE---DCRARIWDLSLC----FI---QQVNALRITPDKQ 104 (148)
Q Consensus 35 ~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~---~~~i~l~d~~~~----~~---~~i~~~~~sp~~~ 104 (148)
..|.++|.+.. ....+..+...+...+|+|||+.++..+. +..+++||+.++ +. ..+....|+|||+
T Consensus 182 ~~l~~~d~dg~---~~~~lt~~~~~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g~~~~l~~~~g~~~~~~~SPDG~ 258 (435)
T PRK05137 182 KRLAIMDQDGA---NVRYLTDGSSLVLTPRFSPNRQEITYMSYANGRPRVYLLDLETGQRELVGNFPGMTFAPRFSPDGR 258 (435)
T ss_pred eEEEEECCCCC---CcEEEecCCCCeEeeEECCCCCEEEEEEecCCCCEEEEEECCCCcEEEeecCCCcccCcEECCCCC
Confidence 37888888765 44556667788999999999998877654 468999999876 22 5567889999999
Q ss_pred EEEE-EecCCceecCeeEEEeecCCCc
Q psy7062 105 LLAS-AEELSCCYCGAAVFVYNSCYPA 130 (148)
Q Consensus 105 ~l~~-~~~d~~~~~~~~i~~~d~~~~~ 130 (148)
.|+. .+.++ ...|++||+.+..
T Consensus 259 ~la~~~~~~g----~~~Iy~~d~~~~~ 281 (435)
T PRK05137 259 KVVMSLSQGG----NTDIYTMDLRSGT 281 (435)
T ss_pred EEEEEEecCC----CceEEEEECCCCc
Confidence 7764 44444 4468888977543
No 238
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=98.49 E-value=8.2e-06 Score=60.53 Aligned_cols=99 Identities=15% Similarity=0.106 Sum_probs=80.3
Q ss_pred ccEEEEEecCC-eEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----cc----ccce
Q psy7062 25 VEMVAALGGYQ-HIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC----FI----QQVN 95 (148)
Q Consensus 25 ~~~l~~~~~d~-~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~----~~----~~i~ 95 (148)
++-++.|..|+ .+-++|.+++ + ...+...-+.|.+++++|+|++++.+.....+.+.|+.++ .. +-|.
T Consensus 371 ~e~~vigt~dgD~l~iyd~~~~--e-~kr~e~~lg~I~av~vs~dGK~~vvaNdr~el~vididngnv~~idkS~~~lIt 447 (668)
T COG4946 371 PEGDVIGTNDGDKLGIYDKDGG--E-VKRIEKDLGNIEAVKVSPDGKKVVVANDRFELWVIDIDNGNVRLIDKSEYGLIT 447 (668)
T ss_pred CcceEEeccCCceEEEEecCCc--e-EEEeeCCccceEEEEEcCCCcEEEEEcCceEEEEEEecCCCeeEecccccceeE
Confidence 44566767777 8999999987 4 4455556788999999999999999998999999999988 21 7799
Q ss_pred EEEEccCCCEEEEEecCCceecCeeEEEeecCC
Q psy7062 96 ALRITPDKQLLASAEELSCCYCGAAVFVYNSCY 128 (148)
Q Consensus 96 ~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~ 128 (148)
.+.|||++++++-+..+|-.. +.|+++|...
T Consensus 448 df~~~~nsr~iAYafP~gy~t--q~Iklydm~~ 478 (668)
T COG4946 448 DFDWHPNSRWIAYAFPEGYYT--QSIKLYDMDG 478 (668)
T ss_pred EEEEcCCceeEEEecCcceee--eeEEEEecCC
Confidence 999999999999999876433 3677777654
No 239
>KOG4532|consensus
Probab=98.48 E-value=4.7e-06 Score=57.65 Aligned_cols=107 Identities=9% Similarity=0.070 Sum_probs=80.4
Q ss_pred ccEEEEEecCCeEEEEeCCCCCCCceEEecCCCC--CEEEEEEccCCCEEEEEeCCCcEEEEECCcc---c-----c---
Q psy7062 25 VEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSK--NVVEVGFQEDGKWMFTGGEDCRARIWDLSLC---F-----I--- 91 (148)
Q Consensus 25 ~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~--~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~---~-----~--- 91 (148)
..++.+ +.|.++++++++.. ..... .|.. ....+++++|++++++.+....+.+|.+... + .
T Consensus 129 ~~~~i~-sndht~k~~~~~~~--s~~~~--~h~~~~~~ns~~~snd~~~~~~Vgds~~Vf~y~id~~sey~~~~~~a~t~ 203 (344)
T KOG4532|consen 129 FPLNIA-SNDHTGKTMVVSGD--SNKFA--VHNQNLTQNSLHYSNDPSWGSSVGDSRRVFRYAIDDESEYIENIYEAPTS 203 (344)
T ss_pred cceeec-cCCcceeEEEEecC--cccce--eeccccceeeeEEcCCCceEEEecCCCcceEEEeCCccceeeeeEecccC
Confidence 344555 88899999988865 22212 2333 3788999999999999999999999999765 1 1
Q ss_pred ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceeccCcccCcc
Q psy7062 92 QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVASNTLVKPQ 142 (148)
Q Consensus 92 ~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~ 142 (148)
..-.+..|+.....+++++.|| .+.+||+++..-+...+...+|.
T Consensus 204 D~gF~~S~s~~~~~FAv~~Qdg------~~~I~DVR~~~tpm~~~sstrp~ 248 (344)
T KOG4532|consen 204 DHGFYNSFSENDLQFAVVFQDG------TCAIYDVRNMATPMAEISSTRPH 248 (344)
T ss_pred CCceeeeeccCcceEEEEecCC------cEEEEEecccccchhhhcccCCC
Confidence 5567889999999999999998 99999999877665554444443
No 240
>KOG3881|consensus
Probab=98.47 E-value=4.9e-06 Score=59.95 Aligned_cols=105 Identities=12% Similarity=0.179 Sum_probs=83.4
Q ss_pred CCCCccEEEEEecC--CeEEEEeCCCCCCCceEEecCC---------CCCEEEEEEccC--CCEEEEEeCCCcEEEEECC
Q psy7062 21 SKHLVEMVAALGGY--QHIRMYDFGSNNPNPVINCEGV---------SKNVVEVGFQED--GKWMFTGGEDCRARIWDLS 87 (148)
Q Consensus 21 ~~~~~~~l~~~~~d--~~v~~~d~~~~~~~~~~~~~~~---------~~~i~~~~~sp~--~~~l~~~~~~~~i~l~d~~ 87 (148)
.+....++++|+.. ..+++||+++. +++.+-+.- +-+++++.|-+. ...+++++..+.+++||.+
T Consensus 157 ~~~~p~Iva~GGke~~n~lkiwdle~~--~qiw~aKNvpnD~L~LrVPvW~tdi~Fl~g~~~~~fat~T~~hqvR~YDt~ 234 (412)
T KOG3881|consen 157 TDTDPYIVATGGKENINELKIWDLEQS--KQIWSAKNVPNDRLGLRVPVWITDIRFLEGSPNYKFATITRYHQVRLYDTR 234 (412)
T ss_pred CCCCCceEecCchhcccceeeeecccc--eeeeeccCCCCccccceeeeeeccceecCCCCCceEEEEecceeEEEecCc
Confidence 33446677888888 78999999987 555554432 246788888886 7899999999999999998
Q ss_pred cc------cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCccee
Q psy7062 88 LC------FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVV 133 (148)
Q Consensus 88 ~~------~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~ 133 (148)
.+ |. .++.++...|++++++++..-+ .+..+|++......
T Consensus 235 ~qRRPV~~fd~~E~~is~~~l~p~gn~Iy~gn~~g------~l~~FD~r~~kl~g 283 (412)
T KOG3881|consen 235 HQRRPVAQFDFLENPISSTGLTPSGNFIYTGNTKG------QLAKFDLRGGKLLG 283 (412)
T ss_pred ccCcceeEeccccCcceeeeecCCCcEEEEecccc------hhheecccCceeec
Confidence 76 22 8899999999999999999855 89999998765543
No 241
>PRK04792 tolB translocation protein TolB; Provisional
Probab=98.45 E-value=1.4e-05 Score=60.20 Aligned_cols=107 Identities=14% Similarity=0.055 Sum_probs=69.5
Q ss_pred EEEEeCCCCccEEEEEec-CC--eEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEE-EeCCCc--EEEEECCcc
Q psy7062 16 STVFDSKHLVEMVAALGG-YQ--HIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFT-GGEDCR--ARIWDLSLC 89 (148)
Q Consensus 16 ~~~~~~~~~~~~l~~~~~-d~--~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~-~~~~~~--i~l~d~~~~ 89 (148)
...|+|+ |+.|+..+. ++ .+.++|+.++ +. ..+...........|+|||+.++. .+.++. |.++|+.++
T Consensus 222 ~p~wSPD--G~~La~~s~~~g~~~L~~~dl~tg--~~-~~lt~~~g~~~~~~wSPDG~~La~~~~~~g~~~Iy~~dl~tg 296 (448)
T PRK04792 222 SPAWSPD--GRKLAYVSFENRKAEIFVQDIYTQ--VR-EKVTSFPGINGAPRFSPDGKKLALVLSKDGQPEIYVVDIATK 296 (448)
T ss_pred CceECCC--CCEEEEEEecCCCcEEEEEECCCC--Ce-EEecCCCCCcCCeeECCCCCEEEEEEeCCCCeEEEEEECCCC
Confidence 5678887 666665443 22 5888899877 32 222222333446799999997754 555664 777788766
Q ss_pred ----cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062 90 ----FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA 130 (148)
Q Consensus 90 ----~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~ 130 (148)
+. .......|+||++.|+..+..+ ....|+++|+.+.+
T Consensus 297 ~~~~lt~~~~~~~~p~wSpDG~~I~f~s~~~---g~~~Iy~~dl~~g~ 341 (448)
T PRK04792 297 ALTRITRHRAIDTEPSWHPDGKSLIFTSERG---GKPQIYRVNLASGK 341 (448)
T ss_pred CeEECccCCCCccceEECCCCCEEEEEECCC---CCceEEEEECCCCC
Confidence 22 3456789999999887766432 23468888876543
No 242
>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats.
Probab=98.43 E-value=2e-06 Score=64.77 Aligned_cols=69 Identities=16% Similarity=0.164 Sum_probs=55.7
Q ss_pred cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCc
Q psy7062 14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSL 88 (148)
Q Consensus 14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~ 88 (148)
..+++++|+ .+.|+.|+.||+|.+||...+ +.......-.++.++|+|+|..+++|+..|.+.+||.--
T Consensus 262 v~~ca~sp~--E~kLvlGC~DgSiiLyD~~~~----~t~~~ka~~~P~~iaWHp~gai~~V~s~qGelQ~FD~AL 330 (545)
T PF11768_consen 262 VICCARSPS--EDKLVLGCEDGSIILYDTTRG----VTLLAKAEFIPTLIAWHPDGAIFVVGSEQGELQCFDMAL 330 (545)
T ss_pred ceEEecCcc--cceEEEEecCCeEEEEEcCCC----eeeeeeecccceEEEEcCCCcEEEEEcCCceEEEEEeec
Confidence 456666666 788899999999999999865 333333455678999999999999999999999999843
No 243
>KOG1409|consensus
Probab=98.41 E-value=2.8e-06 Score=60.41 Aligned_cols=84 Identities=15% Similarity=0.298 Sum_probs=67.0
Q ss_pred ccccceeeecC----cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCC
Q psy7062 3 AALGGILTAFG----QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGED 78 (148)
Q Consensus 3 ~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~ 78 (148)
++++-+.+..+ ..+.+|++. ..+|.+|..|..+.+||+...+ .....+.+|...|..+..-+--+.+.+++.|
T Consensus 185 ~~~~~i~~~~~h~~~~~~l~Wd~~--~~~LfSg~~d~~vi~wdigg~~-g~~~el~gh~~kV~~l~~~~~t~~l~S~~ed 261 (404)
T KOG1409|consen 185 NGCQLITTFNGHTGEVTCLKWDPG--QRLLFSGASDHSVIMWDIGGRK-GTAYELQGHNDKVQALSYAQHTRQLISCGED 261 (404)
T ss_pred cCCceEEEEcCcccceEEEEEcCC--CcEEEeccccCceEEEeccCCc-ceeeeeccchhhhhhhhhhhhheeeeeccCC
Confidence 44555555544 357777777 7889999999999999998762 3456777899999999888888899999999
Q ss_pred CcEEEEECCcc
Q psy7062 79 CRARIWDLSLC 89 (148)
Q Consensus 79 ~~i~l~d~~~~ 89 (148)
|.|.+||.+..
T Consensus 262 g~i~~w~mn~~ 272 (404)
T KOG1409|consen 262 GGIVVWNMNVK 272 (404)
T ss_pred CeEEEEeccce
Confidence 99999999654
No 244
>KOG1587|consensus
Probab=98.40 E-value=6.8e-06 Score=62.97 Aligned_cols=90 Identities=13% Similarity=0.201 Sum_probs=72.3
Q ss_pred CeEEEEeCCCCCCCceEEecCCCCCEEEEEEcc-CCCEEEEEeCCCcEEEEECCcc-------c--c-----ccceEEEE
Q psy7062 35 QHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQE-DGKWMFTGGEDCRARIWDLSLC-------F--I-----QQVNALRI 99 (148)
Q Consensus 35 ~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp-~~~~l~~~~~~~~i~l~d~~~~-------~--~-----~~i~~~~~ 99 (148)
+.+.+|+++.+ ..+...+. ....|++++|+| +...++.|+.+|.|-+||++.+ + . .++..+.|
T Consensus 222 ~~~~vW~~~~p-~~Pe~~~~-~~s~v~~~~f~p~~p~ll~gG~y~GqV~lWD~~~~~~~~~s~ls~~~~sh~~~v~~vvW 299 (555)
T KOG1587|consen 222 GVLLVWSLKNP-NTPELVLE-SPSEVTCLKFCPFDPNLLAGGCYNGQVVLWDLRKGSDTPPSGLSALEVSHSEPVTAVVW 299 (555)
T ss_pred ceEEEEecCCC-CCceEEEe-cCCceeEEEeccCCcceEEeeccCceEEEEEccCCCCCCCcccccccccCCcCeEEEEE
Confidence 37999999987 45566665 578899999999 6778899999999999999876 1 1 77888899
Q ss_pred ccCC--CEEEEEecCCceecCeeEEEeecCCCcce
Q psy7062 100 TPDK--QLLASAEELSCCYCGAAVFVYNSCYPAAV 132 (148)
Q Consensus 100 sp~~--~~l~~~~~d~~~~~~~~i~~~d~~~~~~~ 132 (148)
..+. .-+++++.|| .|..|+++....+
T Consensus 300 ~~~~~~~~f~s~ssDG------~i~~W~~~~l~~P 328 (555)
T KOG1587|consen 300 LQNEHNTEFFSLSSDG------SICSWDTDMLSLP 328 (555)
T ss_pred eccCCCCceEEEecCC------cEeeeeccccccc
Confidence 7644 4499999999 9999998765543
No 245
>KOG1963|consensus
Probab=98.39 E-value=7.1e-06 Score=64.10 Aligned_cols=107 Identities=16% Similarity=0.165 Sum_probs=80.8
Q ss_pred cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEE---ecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCc--
Q psy7062 14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVIN---CEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSL-- 88 (148)
Q Consensus 14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~---~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~-- 88 (148)
+.++++.+. +++.+. ..+..+.+|+.+... +.... -..|.-.+++.++||.+++++++..||.|.+|.-..
T Consensus 163 ~~~I~~~~~--ge~~~i-~~~~~~~~~~v~~~~-~~~~~~~~~~~Htf~~t~~~~spn~~~~Aa~d~dGrI~vw~d~~~~ 238 (792)
T KOG1963|consen 163 PKSIVDNNS--GEFKGI-VHMCKIHIYFVPKHT-KHTSSRDITVHHTFNITCVALSPNERYLAAGDSDGRILVWRDFGSS 238 (792)
T ss_pred CccEEEcCC--ceEEEE-EEeeeEEEEEecccc-eeeccchhhhhhcccceeEEeccccceEEEeccCCcEEEEeccccc
Confidence 456666665 555555 557788889888741 11111 123666689999999999999999999999994433
Q ss_pred c-------cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062 89 C-------FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA 130 (148)
Q Consensus 89 ~-------~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~ 130 (148)
. |. ..+.+++|+++|.+|++|+.++ -+.+|...++.
T Consensus 239 ~~~~t~t~lHWH~~~V~~L~fS~~G~~LlSGG~E~------VLv~Wq~~T~~ 284 (792)
T KOG1963|consen 239 DDSETCTLLHWHHDEVNSLSFSSDGAYLLSGGREG------VLVLWQLETGK 284 (792)
T ss_pred cccccceEEEecccccceeEEecCCceEeecccce------EEEEEeecCCC
Confidence 2 32 6899999999999999999988 88999988765
No 246
>PRK01029 tolB translocation protein TolB; Provisional
Probab=98.37 E-value=2.5e-05 Score=58.55 Aligned_cols=110 Identities=11% Similarity=0.055 Sum_probs=71.2
Q ss_pred EEEEEeCCCCccEEEEEe-cCCeEEEE--eCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCC---CcEEEEECCc
Q psy7062 15 ISTVFDSKHLVEMVAALG-GYQHIRMY--DFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGED---CRARIWDLSL 88 (148)
Q Consensus 15 ~~~~~~~~~~~~~l~~~~-~d~~v~~~--d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~---~~i~l~d~~~ 88 (148)
...+|+|+ |+.|+..+ .++...+| ++.... .....+..+...+....|+|||+.++..+.+ ..+.+||+.+
T Consensus 284 ~~p~wSPD--G~~Laf~s~~~g~~~ly~~~~~~~g-~~~~~lt~~~~~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~~ 360 (428)
T PRK01029 284 GNPSFSPD--GTRLVFVSNKDGRPRIYIMQIDPEG-QSPRLLTKKYRNSSCPAWSPDGKKIAFCSVIKGVRQICVYDLAT 360 (428)
T ss_pred CCeEECCC--CCEEEEEECCCCCceEEEEECcccc-cceEEeccCCCCccceeECCCCCEEEEEEcCCCCcEEEEEECCC
Confidence 35678888 66555544 45544555 443221 2234444444566788999999988765543 3689999987
Q ss_pred c----cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062 89 C----FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA 130 (148)
Q Consensus 89 ~----~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~ 130 (148)
+ +. .......|+|||+.|+....++ ....|+++|+...+
T Consensus 361 g~~~~Lt~~~~~~~~p~wSpDG~~L~f~~~~~---g~~~L~~vdl~~g~ 406 (428)
T PRK01029 361 GRDYQLTTSPENKESPSWAIDSLHLVYSAGNS---NESELYLISLITKK 406 (428)
T ss_pred CCeEEccCCCCCccceEECCCCCEEEEEECCC---CCceEEEEECCCCC
Confidence 7 32 3466789999999887655432 24578899987654
No 247
>KOG1064|consensus
Probab=98.32 E-value=3.9e-06 Score=70.40 Aligned_cols=115 Identities=16% Similarity=0.157 Sum_probs=92.1
Q ss_pred EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecC-CCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----
Q psy7062 15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEG-VSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC---- 89 (148)
Q Consensus 15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~-~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~---- 89 (148)
....++....-.+.++|+.||.+++|.-..+ ..+..++. -++.++.+.|+.+|+.+..+..||.+-+|.+...
T Consensus 2210 ~v~r~~sHp~~~~Yltgs~dgsv~~~~w~~~--~~v~~~rt~g~s~vtr~~f~~qGnk~~i~d~dg~l~l~q~~pk~~~s 2287 (2439)
T KOG1064|consen 2210 NVRRMTSHPSDPYYLTGSQDGSVRMFEWGHG--QQVVCFRTAGNSRVTRSRFNHQGNKFGIVDGDGDLSLWQASPKPYTS 2287 (2439)
T ss_pred ceeeecCCCCCceEEecCCCceEEEEeccCC--CeEEEeeccCcchhhhhhhcccCCceeeeccCCceeecccCCcceec
Confidence 4455554444778889999999999999887 66666652 3478999999999999999999999999988543
Q ss_pred ------------------------------------cc-----------ccceEEEEccCCCEEEEEecCCceecCeeEE
Q psy7062 90 ------------------------------------FI-----------QQVNALRITPDKQLLASAEELSCCYCGAAVF 122 (148)
Q Consensus 90 ------------------------------------~~-----------~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~ 122 (148)
+. +...++++.|..+.|++|+++| .|+
T Consensus 2288 ~qchnk~~~Df~Fi~s~~~tag~s~d~~n~~lwDtl~~~~~s~v~~~H~~gaT~l~~~P~~qllisggr~G------~v~ 2361 (2439)
T KOG1064|consen 2288 WQCHNKALSDFRFIGSLLATAGRSSDNRNVCLWDTLLPPMNSLVHTCHDGGATVLAYAPKHQLLISGGRKG------EVC 2361 (2439)
T ss_pred cccCCccccceeeeehhhhccccCCCCCcccchhcccCcccceeeeecCCCceEEEEcCcceEEEecCCcC------cEE
Confidence 00 6788899999999999999988 999
Q ss_pred EeecCCCcceeccCc
Q psy7062 123 VYNSCYPAAVVASNT 137 (148)
Q Consensus 123 ~~d~~~~~~~~~~~~ 137 (148)
+||++..+.++.++.
T Consensus 2362 l~D~rqrql~h~~~~ 2376 (2439)
T KOG1064|consen 2362 LFDIRQRQLRHTFQA 2376 (2439)
T ss_pred EeehHHHHHHHHhhh
Confidence 999997777665544
No 248
>KOG4714|consensus
Probab=98.30 E-value=2.9e-06 Score=58.37 Aligned_cols=72 Identities=19% Similarity=0.234 Sum_probs=59.3
Q ss_pred EEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEcc-CCCEEEEEeCCCcEEEEECCcc
Q psy7062 16 STVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQE-DGKWMFTGGEDCRARIWDLSLC 89 (148)
Q Consensus 16 ~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp-~~~~l~~~~~~~~i~l~d~~~~ 89 (148)
+++-+|.. ..+++.|++||.+-+||.++. ..+...+..|+..+..+-|+| ++..|+++++||.++-||..+.
T Consensus 184 ~l~~hp~q-q~~v~cgt~dg~~~l~d~rn~-~~p~S~l~ahk~~i~eV~FHpk~p~~Lft~sedGslw~wdas~~ 256 (319)
T KOG4714|consen 184 ALCSHPAQ-QHLVCCGTDDGIVGLWDARNV-AMPVSLLKAHKAEIWEVHFHPKNPEHLFTCSEDGSLWHWDASTT 256 (319)
T ss_pred hhhCCccc-ccEEEEecCCCeEEEEEcccc-cchHHHHHHhhhhhhheeccCCCchheeEecCCCcEEEEcCCCc
Confidence 34444543 678888899999999999986 345667778999999999999 7889999999999999999843
No 249
>KOG4497|consensus
Probab=98.30 E-value=1.4e-05 Score=56.78 Aligned_cols=94 Identities=13% Similarity=0.240 Sum_probs=73.1
Q ss_pred EEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCC-EEEEEeCCCcEEEEECCcc----cc
Q psy7062 17 TVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGK-WMFTGGEDCRARIWDLSLC----FI 91 (148)
Q Consensus 17 ~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~-~l~~~~~~~~i~l~d~~~~----~~ 91 (148)
+-|..+. .-.|+....++.|.+|++... +--..+..-...+..++|||||+ .+.+...+-+|-+|.+.+. ++
T Consensus 54 ieW~ads-~~ilC~~yk~~~vqvwsl~Qp--ew~ckIdeg~agls~~~WSPdgrhiL~tseF~lriTVWSL~t~~~~~~~ 130 (447)
T KOG4497|consen 54 IEWKADS-CHILCVAYKDPKVQVWSLVQP--EWYCKIDEGQAGLSSISWSPDGRHILLTSEFDLRITVWSLNTQKGYLLP 130 (447)
T ss_pred eeeeccc-eeeeeeeeccceEEEEEeecc--eeEEEeccCCCcceeeeECCCcceEeeeecceeEEEEEEeccceeEEec
Confidence 3455553 344555588889999999987 66667766678899999999997 5566777899999999887 33
Q ss_pred ---ccceEEEEccCCCEEEEEecCC
Q psy7062 92 ---QQVNALRITPDKQLLASAEELS 113 (148)
Q Consensus 92 ---~~i~~~~~sp~~~~l~~~~~d~ 113 (148)
..+..++|+|||++.+..++..
T Consensus 131 ~pK~~~kg~~f~~dg~f~ai~sRrD 155 (447)
T KOG4497|consen 131 HPKTNVKGYAFHPDGQFCAILSRRD 155 (447)
T ss_pred ccccCceeEEECCCCceeeeeeccc
Confidence 6678899999999988887643
No 250
>PRK01029 tolB translocation protein TolB; Provisional
Probab=98.29 E-value=4e-05 Score=57.46 Aligned_cols=112 Identities=15% Similarity=0.245 Sum_probs=67.0
Q ss_pred EEEEEeCCCCccEEEEEec-CC----eEEEEeCCCCCC-CceEEecCCCCCEEEEEEccCCCEEEEEe-CCCcEEEE--E
Q psy7062 15 ISTVFDSKHLVEMVAALGG-YQ----HIRMYDFGSNNP-NPVINCEGVSKNVVEVGFQEDGKWMFTGG-EDCRARIW--D 85 (148)
Q Consensus 15 ~~~~~~~~~~~~~l~~~~~-d~----~v~~~d~~~~~~-~~~~~~~~~~~~i~~~~~sp~~~~l~~~~-~~~~i~l~--d 85 (148)
...+|+|+ |+.|+..+. ++ .+..|++..+.. +...............+|+|||+.++..+ .++...+| +
T Consensus 234 ~~p~wSPD--G~~Laf~s~~~g~~di~~~~~~~~~g~~g~~~~lt~~~~~~~~~p~wSPDG~~Laf~s~~~g~~~ly~~~ 311 (428)
T PRK01029 234 LMPTFSPR--KKLLAFISDRYGNPDLFIQSFSLETGAIGKPRRLLNEAFGTQGNPSFSPDGTRLVFVSNKDGRPRIYIMQ 311 (428)
T ss_pred cceEECCC--CCEEEEEECCCCCcceeEEEeecccCCCCcceEeecCCCCCcCCeEECCCCCEEEEEECCCCCceEEEEE
Confidence 35678888 666665342 22 344467765311 22222222223446789999999776654 45654444 4
Q ss_pred CCc--c----cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcc
Q psy7062 86 LSL--C----FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAA 131 (148)
Q Consensus 86 ~~~--~----~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~ 131 (148)
+.. . +. ..+....|+|||+.|+..+.++ +...|.+||+.+.+.
T Consensus 312 ~~~~g~~~~~lt~~~~~~~~p~wSPDG~~Laf~~~~~---g~~~I~v~dl~~g~~ 363 (428)
T PRK01029 312 IDPEGQSPRLLTKKYRNSSCPAWSPDGKKIAFCSVIK---GVRQICVYDLATGRD 363 (428)
T ss_pred CcccccceEEeccCCCCccceeECCCCCEEEEEEcCC---CCcEEEEEECCCCCe
Confidence 432 1 22 4567889999999888776543 234799999876543
No 251
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=98.28 E-value=4.9e-05 Score=56.46 Aligned_cols=107 Identities=15% Similarity=0.097 Sum_probs=71.8
Q ss_pred EEEEEeCCCCccEEE-EEecCC--eEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeC-CC--cEEEEECCc
Q psy7062 15 ISTVFDSKHLVEMVA-ALGGYQ--HIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGE-DC--RARIWDLSL 88 (148)
Q Consensus 15 ~~~~~~~~~~~~~l~-~~~~d~--~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~-~~--~i~l~d~~~ 88 (148)
...+|+|+ ++.|+ +.+.++ .+.+||+.++ . ...+..+........|+|||+.++..+. .+ .+.++|+..
T Consensus 237 ~~~~~spD--g~~l~~~~~~~~~~~i~~~d~~~~--~-~~~l~~~~~~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~~ 311 (417)
T TIGR02800 237 GAPAFSPD--GSKLAVSLSKDGNPDIYVMDLDGK--Q-LTRLTNGPGIDTEPSWSPDGKSIAFTSDRGGSPQIYMMDADG 311 (417)
T ss_pred cceEECCC--CCEEEEEECCCCCccEEEEECCCC--C-EEECCCCCCCCCCEEECCCCCEEEEEECCCCCceEEEEECCC
Confidence 35677787 55444 434443 5888898876 3 3444444444556789999998876554 33 577778766
Q ss_pred c----cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCC
Q psy7062 89 C----FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYP 129 (148)
Q Consensus 89 ~----~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~ 129 (148)
. +. .......|+|++++++.++.++ ....|.+||+.+.
T Consensus 312 ~~~~~l~~~~~~~~~~~~spdg~~i~~~~~~~---~~~~i~~~d~~~~ 356 (417)
T TIGR02800 312 GEVRRLTFRGGYNASPSWSPDGDLIAFVHREG---GGFNIAVMDLDGG 356 (417)
T ss_pred CCEEEeecCCCCccCeEECCCCCEEEEEEccC---CceEEEEEeCCCC
Confidence 5 22 4566789999999988887654 3457889998753
No 252
>KOG4497|consensus
Probab=98.27 E-value=1.5e-05 Score=56.77 Aligned_cols=67 Identities=15% Similarity=0.308 Sum_probs=53.0
Q ss_pred CCEEEEEEccCCCEEEEEeCC--CcEEEEECCcc-----c-c-ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCC
Q psy7062 58 KNVVEVGFQEDGKWMFTGGED--CRARIWDLSLC-----F-I-QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCY 128 (148)
Q Consensus 58 ~~i~~~~~sp~~~~l~~~~~~--~~i~l~d~~~~-----~-~-~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~ 128 (148)
..+..++||+|..++++.... +.+.+||++.. + + .+|+.+.|+|....|+.+.. +.++++|...-
T Consensus 319 ~g~g~lafs~Ds~y~aTrnd~~PnalW~Wdlq~l~l~avLiQk~piraf~WdP~~prL~vctg------~srLY~W~psg 392 (447)
T KOG4497|consen 319 CGAGKLAFSCDSTYAATRNDKYPNALWLWDLQNLKLHAVLIQKHPIRAFEWDPGRPRLVVCTG------KSRLYFWAPSG 392 (447)
T ss_pred cccceeeecCCceEEeeecCCCCceEEEEechhhhhhhhhhhccceeEEEeCCCCceEEEEcC------CceEEEEcCCC
Confidence 467889999999999987543 68999999887 2 2 99999999998877777665 33799998765
Q ss_pred Cc
Q psy7062 129 PA 130 (148)
Q Consensus 129 ~~ 130 (148)
+.
T Consensus 393 ~~ 394 (447)
T KOG4497|consen 393 PR 394 (447)
T ss_pred ce
Confidence 43
No 253
>PRK00178 tolB translocation protein TolB; Provisional
Probab=98.26 E-value=8.4e-05 Score=55.63 Aligned_cols=107 Identities=11% Similarity=0.068 Sum_probs=71.0
Q ss_pred EEEEeCCCCccEEE-EEecCC--eEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeC-CC--cEEEEECCcc
Q psy7062 16 STVFDSKHLVEMVA-ALGGYQ--HIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGE-DC--RARIWDLSLC 89 (148)
Q Consensus 16 ~~~~~~~~~~~~l~-~~~~d~--~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~-~~--~i~l~d~~~~ 89 (148)
..+|+|+ |+.|+ +.+.++ .+.++|++++ + ...+..+........|+|||+.++..+. ++ .+.++|+.++
T Consensus 247 ~~~~SpD--G~~la~~~~~~g~~~Iy~~d~~~~--~-~~~lt~~~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~~g 321 (430)
T PRK00178 247 APAWSPD--GSKLAFVLSKDGNPEIYVMDLASR--Q-LSRVTNHPAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVNVNGG 321 (430)
T ss_pred CeEECCC--CCEEEEEEccCCCceEEEEECCCC--C-eEEcccCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECCCC
Confidence 5778887 66655 434444 6888899886 3 3445545555667899999997765543 33 5777777665
Q ss_pred ----cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062 90 ----FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA 130 (148)
Q Consensus 90 ----~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~ 130 (148)
+. .......|+|+++.++....++ +...|.+||+.+..
T Consensus 322 ~~~~lt~~~~~~~~~~~Spdg~~i~~~~~~~---~~~~l~~~dl~tg~ 366 (430)
T PRK00178 322 RAERVTFVGNYNARPRLSADGKTLVMVHRQD---GNFHVAAQDLQRGS 366 (430)
T ss_pred CEEEeecCCCCccceEECCCCCEEEEEEccC---CceEEEEEECCCCC
Confidence 22 2334568999999988877543 13468889987643
No 254
>PRK04792 tolB translocation protein TolB; Provisional
Probab=98.24 E-value=8.9e-05 Score=55.96 Aligned_cols=108 Identities=16% Similarity=0.082 Sum_probs=70.3
Q ss_pred EEEEEeCCCCccEEE-EEecCC--eEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeC-CC--cEEEEECCc
Q psy7062 15 ISTVFDSKHLVEMVA-ALGGYQ--HIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGE-DC--RARIWDLSL 88 (148)
Q Consensus 15 ~~~~~~~~~~~~~l~-~~~~d~--~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~-~~--~i~l~d~~~ 88 (148)
...+|+|+ |+.|+ +.+.++ .|.++|++++ + ...+..+.......+|+|||+.++..+. ++ .+.++|+.+
T Consensus 265 ~~~~wSPD--G~~La~~~~~~g~~~Iy~~dl~tg--~-~~~lt~~~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~~ 339 (448)
T PRK04792 265 GAPRFSPD--GKKLALVLSKDGQPEIYVVDIATK--A-LTRITRHRAIDTEPSWHPDGKSLIFTSERGGKPQIYRVNLAS 339 (448)
T ss_pred CCeeECCC--CCEEEEEEeCCCCeEEEEEECCCC--C-eEECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCC
Confidence 35678887 66554 445555 4777788776 3 4445545556677899999998765543 34 466667765
Q ss_pred c----cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062 89 C----FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA 130 (148)
Q Consensus 89 ~----~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~ 130 (148)
+ +. .......|+|||++|+..+.++ ....|.++|+.+..
T Consensus 340 g~~~~Lt~~g~~~~~~~~SpDG~~l~~~~~~~---g~~~I~~~dl~~g~ 385 (448)
T PRK04792 340 GKVSRLTFEGEQNLGGSITPDGRSMIMVNRTN---GKFNIARQDLETGA 385 (448)
T ss_pred CCEEEEecCCCCCcCeeECCCCCEEEEEEecC---CceEEEEEECCCCC
Confidence 5 22 2334578999999888876543 23467778876554
No 255
>KOG2695|consensus
Probab=98.24 E-value=1.1e-06 Score=62.47 Aligned_cols=115 Identities=15% Similarity=0.193 Sum_probs=87.8
Q ss_pred EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----
Q psy7062 15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC----- 89 (148)
Q Consensus 15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~----- 89 (148)
..++|+.+..+-.+++ +.+..+-+-|++++ ....|. ..+.|.++.|...+..+..|+.+|.|...|++.+
T Consensus 215 ~~CawSlni~gyhfs~-G~sqqv~L~nvetg---~~qsf~-sksDVfAlQf~~s~nLv~~GcRngeI~~iDLR~rnqG~~ 289 (425)
T KOG2695|consen 215 WSCAWSLNIMGYHFSV-GLSQQVLLTNVETG---HQQSFQ-SKSDVFALQFAGSDNLVFNGCRNGEIFVIDLRCRNQGNG 289 (425)
T ss_pred hhhhhhhccceeeecc-cccceeEEEEeecc---cccccc-cchhHHHHHhcccCCeeEecccCCcEEEEEeeecccCCC
Confidence 3457776655555445 66778888899987 344444 6788999999999999999999999999999876
Q ss_pred -----cc--ccceEEEEcc-CCCEEEEEecCCceecCeeEEEeecCCCcc---eeccCcccC
Q psy7062 90 -----FI--QQVNALRITP-DKQLLASAEELSCCYCGAAVFVYNSCYPAA---VVASNTLVK 140 (148)
Q Consensus 90 -----~~--~~i~~~~~sp-~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~---~~~~~~~~~ 140 (148)
+. +.++++..-. ++++|++.+.+| +|++||++..+. +.++++++.
T Consensus 290 ~~a~rlyh~Ssvtslq~Lq~s~q~LmaS~M~g------kikLyD~R~~K~~~~V~qYeGHvN 345 (425)
T KOG2695|consen 290 WCAQRLYHDSSVTSLQILQFSQQKLMASDMTG------KIKLYDLRATKCKKSVMQYEGHVN 345 (425)
T ss_pred cceEEEEcCcchhhhhhhccccceEeeccCcC------ceeEeeehhhhcccceeeeecccc
Confidence 11 6666665544 778888888888 999999997665 777776554
No 256
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=98.21 E-value=0.00012 Score=60.57 Aligned_cols=109 Identities=11% Similarity=0.091 Sum_probs=77.2
Q ss_pred CcEEEEEeCCCCcc-EEEEEecCCeEEEEeCCCCCCCceEE-------------ec--------CCCCCEEEEEEccCCC
Q psy7062 13 GQISTVFDSKHLVE-MVAALGGYQHIRMYDFGSNNPNPVIN-------------CE--------GVSKNVVEVGFQEDGK 70 (148)
Q Consensus 13 ~~~~~~~~~~~~~~-~l~~~~~d~~v~~~d~~~~~~~~~~~-------------~~--------~~~~~i~~~~~sp~~~ 70 (148)
.+..++++++ ++ ++++-+.++.|++||++++ ..... +- ..-....+++++++|.
T Consensus 741 ~P~GIavspd--G~~LYVADs~n~~Irv~D~~tg--~~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~P~Gvavd~dG~ 816 (1057)
T PLN02919 741 QPSGISLSPD--LKELYIADSESSSIRALDLKTG--GSRLLAGGDPTFSDNLFKFGDHDGVGSEVLLQHPLGVLCAKDGQ 816 (1057)
T ss_pred CccEEEEeCC--CCEEEEEECCCCeEEEEECCCC--cEEEEEecccccCcccccccCCCCchhhhhccCCceeeEeCCCc
Confidence 4567888887 55 5566566789999999876 21110 00 0012346889999999
Q ss_pred EEEEEeCCCcEEEEECCcc-c---c-----------------ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCC
Q psy7062 71 WMFTGGEDCRARIWDLSLC-F---I-----------------QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYP 129 (148)
Q Consensus 71 ~l~~~~~~~~i~l~d~~~~-~---~-----------------~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~ 129 (148)
.+++...++.|++||..++ . . .....++++++|+.+++-+.+. +|++||+.+.
T Consensus 817 LYVADs~N~rIrviD~~tg~v~tiaG~G~~G~~dG~~~~a~l~~P~GIavd~dG~lyVaDt~Nn------~Irvid~~~~ 890 (1057)
T PLN02919 817 IYVADSYNHKIKKLDPATKRVTTLAGTGKAGFKDGKALKAQLSEPAGLALGENGRLFVADTNNS------LIRYLDLNKG 890 (1057)
T ss_pred EEEEECCCCEEEEEECCCCeEEEEeccCCcCCCCCcccccccCCceEEEEeCCCCEEEEECCCC------EEEEEECCCC
Confidence 8888888999999999765 1 0 2467889999998776665544 8999998875
Q ss_pred cc
Q psy7062 130 AA 131 (148)
Q Consensus 130 ~~ 131 (148)
..
T Consensus 891 ~~ 892 (1057)
T PLN02919 891 EA 892 (1057)
T ss_pred cc
Confidence 43
No 257
>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....
Probab=98.20 E-value=4.9e-06 Score=40.72 Aligned_cols=28 Identities=25% Similarity=0.481 Sum_probs=26.5
Q ss_pred ccceEEEEccCCCEEEEEecCCceecCeeEEEee
Q psy7062 92 QQVNALRITPDKQLLASAEELSCCYCGAAVFVYN 125 (148)
Q Consensus 92 ~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d 125 (148)
..|.+++|+|++++|++++.|+ +|++||
T Consensus 12 ~~i~~i~~~~~~~~~~s~~~D~------~i~vwd 39 (39)
T PF00400_consen 12 SSINSIAWSPDGNFLASGSSDG------TIRVWD 39 (39)
T ss_dssp SSEEEEEEETTSSEEEEEETTS------EEEEEE
T ss_pred CcEEEEEEecccccceeeCCCC------EEEEEC
Confidence 6799999999999999999999 999997
No 258
>KOG2695|consensus
Probab=98.18 E-value=1.5e-05 Score=56.94 Aligned_cols=100 Identities=8% Similarity=0.023 Sum_probs=75.2
Q ss_pred ccEEEEEecCCeEEEEeCCCCC---CCceEEecCCCCCEEEEEEcc-CCCEEEEEeCCCcEEEEECCcc--------cc-
Q psy7062 25 VEMVAALGGYQHIRMYDFGSNN---PNPVINCEGVSKNVVEVGFQE-DGKWMFTGGEDCRARIWDLSLC--------FI- 91 (148)
Q Consensus 25 ~~~l~~~~~d~~v~~~d~~~~~---~~~~~~~~~~~~~i~~~~~sp-~~~~l~~~~~~~~i~l~d~~~~--------~~- 91 (148)
++++..|+..|.|...|++.+. ..+...+. |.+.|+++..-. ++.++++.+.+|+|++||++.- ++
T Consensus 264 ~nLv~~GcRngeI~~iDLR~rnqG~~~~a~rly-h~Ssvtslq~Lq~s~q~LmaS~M~gkikLyD~R~~K~~~~V~qYeG 342 (425)
T KOG2695|consen 264 DNLVFNGCRNGEIFVIDLRCRNQGNGWCAQRLY-HDSSVTSLQILQFSQQKLMASDMTGKIKLYDLRATKCKKSVMQYEG 342 (425)
T ss_pred CCeeEecccCCcEEEEEeeecccCCCcceEEEE-cCcchhhhhhhccccceEeeccCcCceeEeeehhhhcccceeeeec
Confidence 7888999999999999998752 12334444 899999998766 8889999999999999999754 22
Q ss_pred ----ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcc
Q psy7062 92 ----QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAA 131 (148)
Q Consensus 92 ----~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~ 131 (148)
....-+-.++....+++++.|. -.++|.+.....
T Consensus 343 HvN~~a~l~~~v~~eeg~I~s~GdDc------ytRiWsl~~ghL 380 (425)
T KOG2695|consen 343 HVNLSAYLPAHVKEEEGSIFSVGDDC------YTRIWSLDSGHL 380 (425)
T ss_pred ccccccccccccccccceEEEccCee------EEEEEecccCce
Confidence 2222233456777888888877 789999885443
No 259
>KOG1354|consensus
Probab=98.18 E-value=1.4e-05 Score=57.06 Aligned_cols=106 Identities=8% Similarity=0.171 Sum_probs=76.0
Q ss_pred eCCCCccEEEEEecCCeEEEEeCCCCCCC-ceEEecCC-----CCCEEEEEEccC-CCEEEEEeCCCcEEEEECCcc---
Q psy7062 20 DSKHLVEMVAALGGYQHIRMYDFGSNNPN-PVINCEGV-----SKNVVEVGFQED-GKWMFTGGEDCRARIWDLSLC--- 89 (148)
Q Consensus 20 ~~~~~~~~l~~~~~d~~v~~~d~~~~~~~-~~~~~~~~-----~~~i~~~~~sp~-~~~l~~~~~~~~i~l~d~~~~--- 89 (148)
+-+++.+.+.+ .+|=.|.+|+++-.... .+.-++.+ +..|++..|+|. .+.++..+..|+|++.|++..
T Consensus 171 S~NsD~Et~lS-ADdLRINLWnlei~d~sFnIVDIKP~nmEeLteVITsaEFhp~~cn~f~YSSSKGtIrLcDmR~~aLC 249 (433)
T KOG1354|consen 171 SVNSDKETFLS-ADDLRINLWNLEIIDQSFNIVDIKPANMEELTEVITSAEFHPHHCNVFVYSSSKGTIRLCDMRQSALC 249 (433)
T ss_pred eecCccceEee-ccceeeeeccccccCCceeEEEccccCHHHHHHHHhhhccCHhHccEEEEecCCCcEEEeechhhhhh
Confidence 34444888888 77789999999754211 12222222 356889999995 567788888999999999843
Q ss_pred ------------------cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCC-ccee
Q psy7062 90 ------------------FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYP-AAVV 133 (148)
Q Consensus 90 ------------------~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~-~~~~ 133 (148)
|. ..|..+.|+++|+++++-. ..+|++||+... +++.
T Consensus 250 d~hsKlfEepedp~~rsffseiIsSISDvKFs~sGryilsRD-------yltvk~wD~nme~~pv~ 308 (433)
T KOG1354|consen 250 DAHSKLFEEPEDPSSRSFFSEIISSISDVKFSHSGRYILSRD-------YLTVKLWDLNMEAKPVE 308 (433)
T ss_pred cchhhhhccccCCcchhhHHHHhhhhhceEEccCCcEEEEec-------cceeEEEeccccCCcce
Confidence 11 7788999999999998876 337999999644 3443
No 260
>KOG4714|consensus
Probab=98.16 E-value=8.2e-06 Score=56.21 Aligned_cols=64 Identities=13% Similarity=0.288 Sum_probs=54.1
Q ss_pred CCEEEEEEccCCC-EEEEEeCCCcEEEEECCcc------cc---ccceEEEEcc-CCCEEEEEecCCceecCeeEEEeec
Q psy7062 58 KNVVEVGFQEDGK-WMFTGGEDCRARIWDLSLC------FI---QQVNALRITP-DKQLLASAEELSCCYCGAAVFVYNS 126 (148)
Q Consensus 58 ~~i~~~~~sp~~~-~l~~~~~~~~i~l~d~~~~------~~---~~i~~~~~sp-~~~~l~~~~~d~~~~~~~~i~~~d~ 126 (148)
..|.+++-+|..+ .+++|+.||.+-+||.+.. +. .+++.+-|+| ++..|+++++|| .+.-||-
T Consensus 180 ~~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~~p~S~l~ahk~~i~eV~FHpk~p~~Lft~sedG------slw~wda 253 (319)
T KOG4714|consen 180 DAVTALCSHPAQQHLVCCGTDDGIVGLWDARNVAMPVSLLKAHKAEIWEVHFHPKNPEHLFTCSEDG------SLWHWDA 253 (319)
T ss_pred ccchhhhCCcccccEEEEecCCCeEEEEEcccccchHHHHHHhhhhhhheeccCCCchheeEecCCC------cEEEEcC
Confidence 4489999999655 6678888999999999987 22 8899999999 788999999999 7888886
Q ss_pred C
Q psy7062 127 C 127 (148)
Q Consensus 127 ~ 127 (148)
.
T Consensus 254 s 254 (319)
T KOG4714|consen 254 S 254 (319)
T ss_pred C
Confidence 5
No 261
>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal
Probab=98.15 E-value=0.0004 Score=48.52 Aligned_cols=81 Identities=12% Similarity=0.196 Sum_probs=58.4
Q ss_pred CCCEEEEEEccCCCEEEEEeCCC-----------cEEEEECCcc-------------------------------c----
Q psy7062 57 SKNVVEVGFQEDGKWMFTGGEDC-----------RARIWDLSLC-------------------------------F---- 90 (148)
Q Consensus 57 ~~~i~~~~~sp~~~~l~~~~~~~-----------~i~l~d~~~~-------------------------------~---- 90 (148)
+..|.++.++|..+.|+.|+... -+.-|.+-+. |
T Consensus 147 p~Gi~~~vy~p~h~LLlVgG~~~~~~~~s~a~~~GLtaWRiL~~~Pyyk~v~~~~~~~~~~~~~~~~~~~~~~~~fs~~~ 226 (282)
T PF15492_consen 147 PHGINSAVYHPKHRLLLVGGCEQNQDGMSKASSCGLTAWRILSDSPYYKQVTSSEDDITASSKRRGLLRIPSFKFFSRQG 226 (282)
T ss_pred CCceeEEEEcCCCCEEEEeccCCCCCccccccccCceEEEEcCCCCcEEEccccCccccccccccceeeccceeeeeccc
Confidence 45789999999988877765421 2444544332 0
Q ss_pred --cccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceeccCcccCcce
Q psy7062 91 --IQQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVASNTLVKPQV 143 (148)
Q Consensus 91 --~~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~ 143 (148)
+..|..+..||||+.|++....| .|.+|++++......+...-.|..
T Consensus 227 ~~~d~i~kmSlSPdg~~La~ih~sG------~lsLW~iPsL~~~~~W~~~eqPg~ 275 (282)
T PF15492_consen 227 QEQDGIFKMSLSPDGSLLACIHFSG------SLSLWEIPSLRLQRSWKQDEQPGY 275 (282)
T ss_pred cCCCceEEEEECCCCCEEEEEEcCC------eEEEEecCcchhhcccchhhCCCC
Confidence 05678899999999999999988 999999998877766655555543
No 262
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=98.14 E-value=0.00021 Score=52.14 Aligned_cols=109 Identities=14% Similarity=0.276 Sum_probs=72.2
Q ss_pred cCcEEEEEeCCCCccEEEEEe-cCCeEEEEeCCCCCCC--ceEEecC----C--CCCEEEEEEccCCCEEEEEeC-CCcE
Q psy7062 12 FGQISTVFDSKHLVEMVAALG-GYQHIRMYDFGSNNPN--PVINCEG----V--SKNVVEVGFQEDGKWMFTGGE-DCRA 81 (148)
Q Consensus 12 ~~~~~~~~~~~~~~~~l~~~~-~d~~v~~~d~~~~~~~--~~~~~~~----~--~~~i~~~~~sp~~~~l~~~~~-~~~i 81 (148)
.++..++|+++ ++++++.. .+++|.++++...... .+..... . ......+.++|||++++.... .+.|
T Consensus 192 ~GPRh~~f~pd--g~~~Yv~~e~s~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~ispdg~~lyvsnr~~~sI 269 (345)
T PF10282_consen 192 SGPRHLAFSPD--GKYAYVVNELSNTVSVFDYDPSDGSLTEIQTISTLPEGFTGENAPAEIAISPDGRFLYVSNRGSNSI 269 (345)
T ss_dssp SSEEEEEE-TT--SSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESCETTSCSSSSEEEEEE-TTSSEEEEEECTTTEE
T ss_pred CCCcEEEEcCC--cCEEEEecCCCCcEEEEeecccCCceeEEEEeeeccccccccCCceeEEEecCCCEEEEEeccCCEE
Confidence 35788999998 66555544 5568999999832112 2222221 1 126789999999998877654 5789
Q ss_pred EEEECCc--c-cc---------ccceEEEEccCCCEEEEEecCCceecCeeEEEeecC
Q psy7062 82 RIWDLSL--C-FI---------QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSC 127 (148)
Q Consensus 82 ~l~d~~~--~-~~---------~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~ 127 (148)
.+|++.. + +. ...+.+.++|+|++|++++.+. +.|.+|++.
T Consensus 270 ~vf~~d~~~g~l~~~~~~~~~G~~Pr~~~~s~~g~~l~Va~~~s-----~~v~vf~~d 322 (345)
T PF10282_consen 270 SVFDLDPATGTLTLVQTVPTGGKFPRHFAFSPDGRYLYVANQDS-----NTVSVFDID 322 (345)
T ss_dssp EEEEECTTTTTEEEEEEEEESSSSEEEEEE-TTSSEEEEEETTT-----TEEEEEEEE
T ss_pred EEEEEecCCCceEEEEEEeCCCCCccEEEEeCCCCEEEEEecCC-----CeEEEEEEe
Confidence 9999942 2 21 4478999999999999998644 368888764
No 263
>KOG2066|consensus
Probab=98.10 E-value=0.00011 Score=57.65 Aligned_cols=99 Identities=13% Similarity=0.185 Sum_probs=76.8
Q ss_pred CCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccC-----CCEEEEEeCCCcEEEEECCcc-------c
Q psy7062 23 HLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQED-----GKWMFTGGEDCRARIWDLSLC-------F 90 (148)
Q Consensus 23 ~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~-----~~~l~~~~~~~~i~l~d~~~~-------~ 90 (148)
..|+++++|+.||++.+..+-+. +...++. ....+.+++++|+ .+.+++|+..| +.++.-+-. +
T Consensus 81 ~~Gey~asCS~DGkv~I~sl~~~--~~~~~~d-f~rpiksial~Pd~~~~~sk~fv~GG~ag-lvL~er~wlgnk~~v~l 156 (846)
T KOG2066|consen 81 LEGEYVASCSDDGKVVIGSLFTD--DEITQYD-FKRPIKSIALHPDFSRQQSKQFVSGGMAG-LVLSERNWLGNKDSVVL 156 (846)
T ss_pred cCCceEEEecCCCcEEEeeccCC--ccceeEe-cCCcceeEEeccchhhhhhhheeecCcce-EEEehhhhhcCccceee
Confidence 34999999999999999998887 4444443 5677899999998 45788888888 666654322 2
Q ss_pred c---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceec
Q psy7062 91 I---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVA 134 (148)
Q Consensus 91 ~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~ 134 (148)
. ++|.++.| .|.+++=++.+| |++||....+.+..
T Consensus 157 ~~~eG~I~~i~W--~g~lIAWand~G-------v~vyd~~~~~~l~~ 194 (846)
T KOG2066|consen 157 SEGEGPIHSIKW--RGNLIAWANDDG-------VKVYDTPTRQRLTN 194 (846)
T ss_pred ecCccceEEEEe--cCcEEEEecCCC-------cEEEeccccceeec
Confidence 2 89999999 899999999988 99999876655443
No 264
>KOG4640|consensus
Probab=98.06 E-value=4e-05 Score=58.53 Aligned_cols=82 Identities=13% Similarity=0.178 Sum_probs=69.1
Q ss_pred cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEE-EEEEccCCCEEEEEeCCCcEEEEECCcc--c
Q psy7062 14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVV-EVGFQEDGKWMFTGGEDCRARIWDLSLC--F 90 (148)
Q Consensus 14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~-~~~~sp~~~~l~~~~~~~~i~l~d~~~~--~ 90 (148)
..-+.|.|. -+++|.+..+|.+.++-++ . +.+.++..|...++ +++|.|||+.++.|=.||+|++.|+.++ +
T Consensus 23 i~~~ewnP~--~dLiA~~t~~gelli~R~n-~--qRlwtip~p~~~v~~sL~W~~DGkllaVg~kdG~I~L~Dve~~~~l 97 (665)
T KOG4640|consen 23 IKRIEWNPK--MDLIATRTEKGELLIHRLN-W--QRLWTIPIPGENVTASLCWRPDGKLLAVGFKDGTIRLHDVEKGGRL 97 (665)
T ss_pred eEEEEEcCc--cchhheeccCCcEEEEEec-c--ceeEeccCCCCccceeeeecCCCCEEEEEecCCeEEEEEccCCCce
Confidence 456778887 8999999999999998888 4 67888887777777 9999999999999999999999999988 1
Q ss_pred c-------ccceEEEEc
Q psy7062 91 I-------QQVNALRIT 100 (148)
Q Consensus 91 ~-------~~i~~~~~s 100 (148)
. ..+.++-|+
T Consensus 98 ~~~~~s~e~~is~~~w~ 114 (665)
T KOG4640|consen 98 VSFLFSVETDISKGIWD 114 (665)
T ss_pred eccccccccchheeecc
Confidence 1 566667775
No 265
>KOG1538|consensus
Probab=98.05 E-value=0.00018 Score=55.73 Aligned_cols=103 Identities=11% Similarity=0.057 Sum_probs=63.7
Q ss_pred EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCce--EEecCCCCCEEEEEEccCC-----CEEEEEeCCCcEEEEECC
Q psy7062 15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPV--INCEGVSKNVVEVGFQEDG-----KWMFTGGEDCRARIWDLS 87 (148)
Q Consensus 15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~--~~~~~~~~~i~~~~~sp~~-----~~l~~~~~~~~i~l~d~~ 87 (148)
.+++|..+ |++|+.|-.+|+|.+-+-... +.+ ...-+..+.|.+++|+|+. ..++..++..++.++.+.
T Consensus 136 ~~CsWtnD--GqylalG~~nGTIsiRNk~gE--ek~~I~Rpgg~Nspiwsi~~~p~sg~G~~di~aV~DW~qTLSFy~Ls 211 (1081)
T KOG1538|consen 136 ICCSWTND--GQYLALGMFNGTISIRNKNGE--EKVKIERPGGSNSPIWSICWNPSSGEGRNDILAVADWGQTLSFYQLS 211 (1081)
T ss_pred EEeeecCC--CcEEEEeccCceEEeecCCCC--cceEEeCCCCCCCCceEEEecCCCCCCccceEEEEeccceeEEEEec
Confidence 35555555 999999999999988765432 111 1222344556666665532 244555555555555443
Q ss_pred cc------------------------------------------------ccccceEEEEccCCCEEEEEecCCceecCe
Q psy7062 88 LC------------------------------------------------FIQQVNALRITPDKQLLASAEELSCCYCGA 119 (148)
Q Consensus 88 ~~------------------------------------------------~~~~i~~~~~sp~~~~l~~~~~d~~~~~~~ 119 (148)
.. +..+||.+...|+++.++.|+.||
T Consensus 212 G~~Igk~r~L~FdP~CisYf~NGEy~LiGGsdk~L~~fTR~GvrLGTvg~~D~WIWtV~~~PNsQ~v~~GCqDG------ 285 (1081)
T KOG1538|consen 212 GKQIGKDRALNFDPCCISYFTNGEYILLGGSDKQLSLFTRDGVRLGTVGEQDSWIWTVQAKPNSQYVVVGCQDG------ 285 (1081)
T ss_pred ceeecccccCCCCchhheeccCCcEEEEccCCCceEEEeecCeEEeeccccceeEEEEEEccCCceEEEEEccC------
Confidence 21 117788888888888888888877
Q ss_pred eEEEeecC
Q psy7062 120 AVFVYNSC 127 (148)
Q Consensus 120 ~i~~~d~~ 127 (148)
+|.-|++-
T Consensus 286 TiACyNl~ 293 (1081)
T KOG1538|consen 286 TIACYNLI 293 (1081)
T ss_pred eeehhhhH
Confidence 77777654
No 266
>KOG0644|consensus
Probab=98.03 E-value=3.1e-06 Score=66.32 Aligned_cols=61 Identities=25% Similarity=0.416 Sum_probs=54.4
Q ss_pred CCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECC
Q psy7062 21 SKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLS 87 (148)
Q Consensus 21 ~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~ 87 (148)
.+.++.++++++.|..|++|-+.++ .++..+.+|++.|++++|+|-. +.+.||++++||.+
T Consensus 240 vs~~n~~iaaaS~D~vIrvWrl~~~--~pvsvLrghtgavtaiafsP~~----sss~dgt~~~wd~r 300 (1113)
T KOG0644|consen 240 VSSNNTMIAAASNDKVIRVWRLPDG--APVSVLRGHTGAVTAIAFSPRA----SSSDDGTCRIWDAR 300 (1113)
T ss_pred cchhhhhhhhcccCceEEEEecCCC--chHHHHhccccceeeeccCccc----cCCCCCceEecccc
Confidence 4444778899999999999999998 8999999999999999999955 67789999999998
No 267
>PRK04043 tolB translocation protein TolB; Provisional
Probab=98.03 E-value=0.00091 Score=50.16 Aligned_cols=111 Identities=10% Similarity=0.041 Sum_probs=69.6
Q ss_pred EEEEEeCCCCccEEEEEec--CCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEE-EEeCC--CcEEEEECCcc
Q psy7062 15 ISTVFDSKHLVEMVAALGG--YQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMF-TGGED--CRARIWDLSLC 89 (148)
Q Consensus 15 ~~~~~~~~~~~~~l~~~~~--d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~-~~~~~--~~i~l~d~~~~ 89 (148)
....|+|+....++++... ...|.++|+.++ +. ..+...........|+|||+.++ +.+.+ ..+.++|+..+
T Consensus 191 ~~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg--~~-~~lt~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~dl~~g 267 (419)
T PRK04043 191 IFPKWANKEQTAFYYTSYGERKPTLYKYNLYTG--KK-EKIASSQGMLVVSDVSKDGSKLLLTMAPKGQPDIYLYDTNTK 267 (419)
T ss_pred EeEEECCCCCcEEEEEEccCCCCEEEEEECCCC--cE-EEEecCCCcEEeeEECCCCCEEEEEEccCCCcEEEEEECCCC
Confidence 4677888832223333222 246889999887 33 33323445556678999998664 44444 46777788666
Q ss_pred ----cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcc
Q psy7062 90 ----FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAA 131 (148)
Q Consensus 90 ----~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~ 131 (148)
+. .......|+|||+.|+..+..+ +...|+++|+...+.
T Consensus 268 ~~~~LT~~~~~d~~p~~SPDG~~I~F~Sdr~---g~~~Iy~~dl~~g~~ 313 (419)
T PRK04043 268 TLTQITNYPGIDVNGNFVEDDKRIVFVSDRL---GYPNIFMKKLNSGSV 313 (419)
T ss_pred cEEEcccCCCccCccEECCCCCEEEEEECCC---CCceEEEEECCCCCe
Confidence 33 2234568999999887777543 345788888875543
No 268
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=98.01 E-value=0.00046 Score=50.43 Aligned_cols=92 Identities=16% Similarity=0.022 Sum_probs=68.6
Q ss_pred CeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeC----------CCcEEEEECCcc-----cc--c-----
Q psy7062 35 QHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGE----------DCRARIWDLSLC-----FI--Q----- 92 (148)
Q Consensus 35 ~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~----------~~~i~l~d~~~~-----~~--~----- 92 (148)
+++.+.|.++. +.+.++..-. ....+ ++||++.++.+.. +..|.+||..+. +. .
T Consensus 27 ~~v~ViD~~~~--~v~g~i~~G~-~P~~~-~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~~~~i~~p~~p~~~ 102 (352)
T TIGR02658 27 TQVYTIDGEAG--RVLGMTDGGF-LPNPV-VASDGSFFAHASTVYSRIARGKRTDYVEVIDPQTHLPIADIELPEGPRFL 102 (352)
T ss_pred ceEEEEECCCC--EEEEEEEccC-CCcee-ECCCCCEEEEEeccccccccCCCCCEEEEEECccCcEEeEEccCCCchhh
Confidence 78999999998 8888877422 22234 8999998877655 689999999988 11 1
Q ss_pred ---cceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceec
Q psy7062 93 ---QVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVA 134 (148)
Q Consensus 93 ---~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~ 134 (148)
....++++|||++|+....+. ...|.++|+.+.+....
T Consensus 103 ~~~~~~~~~ls~dgk~l~V~n~~p----~~~V~VvD~~~~kvv~e 143 (352)
T TIGR02658 103 VGTYPWMTSLTPDNKTLLFYQFSP----SPAVGVVDLEGKAFVRM 143 (352)
T ss_pred ccCccceEEECCCCCEEEEecCCC----CCEEEEEECCCCcEEEE
Confidence 123789999999999888654 44799999887765443
No 269
>KOG1240|consensus
Probab=98.01 E-value=2.9e-05 Score=63.25 Aligned_cols=80 Identities=14% Similarity=0.232 Sum_probs=64.6
Q ss_pred EeCCCCCCCceEEecCCCCCEEEEEEccC-CCEEEEEeCCCcEEEEECCcc----------c----c-ccceEEEEccCC
Q psy7062 40 YDFGSNNPNPVINCEGVSKNVVEVGFQED-GKWMFTGGEDCRARIWDLSLC----------F----I-QQVNALRITPDK 103 (148)
Q Consensus 40 ~d~~~~~~~~~~~~~~~~~~i~~~~~sp~-~~~l~~~~~~~~i~l~d~~~~----------~----~-~~i~~~~~sp~~ 103 (148)
|+.+. ..+..+..|...+..++.++. +.++++|+.||++++||++.. + . .++.++...+.+
T Consensus 1034 W~p~G---~lVAhL~Ehs~~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~~~ 1110 (1431)
T KOG1240|consen 1034 WNPRG---ILVAHLHEHSSAVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCGNG 1110 (1431)
T ss_pred CCccc---eEeehhhhccccccceeecCCCCceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEeccCC
Confidence 55543 467778889988889988775 599999999999999999765 1 1 778888888899
Q ss_pred CEEEEEecCCceecCeeEEEeecCC
Q psy7062 104 QLLASAEELSCCYCGAAVFVYNSCY 128 (148)
Q Consensus 104 ~~l~~~~~d~~~~~~~~i~~~d~~~ 128 (148)
+.++.++.|| .|.+.++..
T Consensus 1111 ~~~Av~t~DG------~v~~~~id~ 1129 (1431)
T KOG1240|consen 1111 DQFAVSTKDG------SVRVLRIDH 1129 (1431)
T ss_pred CeEEEEcCCC------eEEEEEccc
Confidence 9999999999 777776654
No 270
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=98.01 E-value=0.0005 Score=50.18 Aligned_cols=114 Identities=8% Similarity=0.127 Sum_probs=79.0
Q ss_pred eecCcEEEEEeCCCCccEEEEEec----CCeEEEEeCCC--CCCCceEEecCCCCCEEEEEEccCCCEEEEEeC-CCcEE
Q psy7062 10 TAFGQISTVFDSKHLVEMVAALGG----YQHIRMYDFGS--NNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGE-DCRAR 82 (148)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~l~~~~~----d~~v~~~d~~~--~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~-~~~i~ 82 (148)
...++..++++++ +++|.+..+ ++.|..|++.. +....+............++++|++++++++.. ++.+.
T Consensus 35 ~~~~Ps~l~~~~~--~~~LY~~~e~~~~~g~v~~~~i~~~~g~L~~~~~~~~~g~~p~~i~~~~~g~~l~vany~~g~v~ 112 (345)
T PF10282_consen 35 EGENPSWLAVSPD--GRRLYVVNEGSGDSGGVSSYRIDPDTGTLTLLNSVPSGGSSPCHIAVDPDGRFLYVANYGGGSVS 112 (345)
T ss_dssp ESSSECCEEE-TT--SSEEEEEETTSSTTTEEEEEEEETTTTEEEEEEEEEESSSCEEEEEECTTSSEEEEEETTTTEEE
T ss_pred CCCCCceEEEEeC--CCEEEEEEccccCCCCEEEEEECCCcceeEEeeeeccCCCCcEEEEEecCCCEEEEEEccCCeEE
Confidence 3445677788887 677777666 35888888875 322334444434566788999999999998875 78999
Q ss_pred EEECCcc---------c-----------c--ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062 83 IWDLSLC---------F-----------I--QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA 130 (148)
Q Consensus 83 l~d~~~~---------~-----------~--~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~ 130 (148)
++++... + + ....++.|+|+++++++... +...|.+|++....
T Consensus 113 v~~l~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~dl-----G~D~v~~~~~~~~~ 177 (345)
T PF10282_consen 113 VFPLDDDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYVPDL-----GADRVYVYDIDDDT 177 (345)
T ss_dssp EEEECTTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEEEET-----TTTEEEEEEE-TTS
T ss_pred EEEccCCcccceeeeecccCCCCCcccccccccceeEEECCCCCEEEEEec-----CCCEEEEEEEeCCC
Confidence 9999763 1 0 33568999999999888764 24579999987554
No 271
>smart00320 WD40 WD40 repeats. Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.
Probab=97.99 E-value=2.9e-05 Score=36.52 Aligned_cols=38 Identities=26% Similarity=0.589 Sum_probs=32.6
Q ss_pred CceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEE
Q psy7062 48 NPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWD 85 (148)
Q Consensus 48 ~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d 85 (148)
+.+..+..|...+.++.|++++..+++++.|+.+++||
T Consensus 3 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~ 40 (40)
T smart00320 3 ELLKTLKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD 40 (40)
T ss_pred EEEEEEEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence 44566667888999999999999999999999999986
No 272
>KOG4547|consensus
Probab=97.95 E-value=0.00021 Score=54.03 Aligned_cols=82 Identities=15% Similarity=0.150 Sum_probs=69.8
Q ss_pred ccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----cc---ccceE
Q psy7062 25 VEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-----FI---QQVNA 96 (148)
Q Consensus 25 ~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-----~~---~~i~~ 96 (148)
-..+.+++.|..+..|+.... +.++.+...+..+.+++++|||+.+++++ +.|++||+++. |+ +++++
T Consensus 114 ~~ciyS~~ad~~v~~~~~~~~--~~~~~~~~~~~~~~sl~is~D~~~l~~as--~~ik~~~~~~kevv~~ftgh~s~v~t 189 (541)
T KOG4547|consen 114 LGCIYSVGADLKVVYILEKEK--VIIRIWKEQKPLVSSLCISPDGKILLTAS--RQIKVLDIETKEVVITFTGHGSPVRT 189 (541)
T ss_pred cCceEecCCceeEEEEecccc--eeeeeeccCCCccceEEEcCCCCEEEecc--ceEEEEEccCceEEEEecCCCcceEE
Confidence 567888899999999999998 77888887888899999999999998885 57999999998 54 88999
Q ss_pred EEEccC-----CCEEEEEe
Q psy7062 97 LRITPD-----KQLLASAE 110 (148)
Q Consensus 97 ~~~sp~-----~~~l~~~~ 110 (148)
+.|.-+ |.+++++.
T Consensus 190 ~~f~~~~~g~~G~~vLssa 208 (541)
T KOG4547|consen 190 LSFTTLIDGIIGKYVLSSA 208 (541)
T ss_pred EEEEEeccccccceeeecc
Confidence 999876 66666654
No 273
>KOG1409|consensus
Probab=97.94 E-value=9.3e-05 Score=52.93 Aligned_cols=75 Identities=20% Similarity=0.356 Sum_probs=65.2
Q ss_pred CceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc------cc---ccceEEEEccCCCEEEEEecCCceecC
Q psy7062 48 NPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC------FI---QQVNALRITPDKQLLASAEELSCCYCG 118 (148)
Q Consensus 48 ~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~------~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~ 118 (148)
..+.++.+|...+++++|.|....+.+|..|..+.+||+.-. +. ..+..+...+.-+.+++++.||
T Consensus 188 ~~i~~~~~h~~~~~~l~Wd~~~~~LfSg~~d~~vi~wdigg~~g~~~el~gh~~kV~~l~~~~~t~~l~S~~edg----- 262 (404)
T KOG1409|consen 188 QLITTFNGHTGEVTCLKWDPGQRLLFSGASDHSVIMWDIGGRKGTAYELQGHNDKVQALSYAQHTRQLISCGEDG----- 262 (404)
T ss_pred ceEEEEcCcccceEEEEEcCCCcEEEeccccCceEEEeccCCcceeeeeccchhhhhhhhhhhhheeeeeccCCC-----
Confidence 678899999999999999999999999999999999999654 22 6777787778888999999988
Q ss_pred eeEEEeecCC
Q psy7062 119 AAVFVYNSCY 128 (148)
Q Consensus 119 ~~i~~~d~~~ 128 (148)
.|.+||...
T Consensus 263 -~i~~w~mn~ 271 (404)
T KOG1409|consen 263 -GIVVWNMNV 271 (404)
T ss_pred -eEEEEeccc
Confidence 899998653
No 274
>KOG4190|consensus
Probab=97.94 E-value=4.5e-05 Score=57.88 Aligned_cols=63 Identities=11% Similarity=0.243 Sum_probs=47.5
Q ss_pred ccEEEEEecCCeEEEEeCCCCC-----CCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc
Q psy7062 25 VEMVAALGGYQHIRMYDFGSNN-----PNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC 89 (148)
Q Consensus 25 ~~~l~~~~~d~~v~~~d~~~~~-----~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~ 89 (148)
.+-+++++.|.++++|.++... ..+..+++.|+..|..+.|-.+.++++++ |+.+++||...+
T Consensus 747 ENSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~lr~i~Sc--D~giHlWDPFig 814 (1034)
T KOG4190|consen 747 ENSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLADLRSIASC--DGGIHLWDPFIG 814 (1034)
T ss_pred ccceeeccCCceEEEEEeccccCccccceeeeEhhhccCcccceeeeeccceeeec--cCcceeeccccc
Confidence 4557788999999999997431 13567788899999999888887777554 778888887443
No 275
>KOG1912|consensus
Probab=97.93 E-value=0.00015 Score=56.89 Aligned_cols=118 Identities=15% Similarity=0.112 Sum_probs=84.5
Q ss_pred ccceeeecCcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCC------------CEE
Q psy7062 5 LGGILTAFGQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDG------------KWM 72 (148)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~------------~~l 72 (148)
+.|.....+..++.|.+ +.+++.|+ .+.|.+-|..+. +.+..++.|...|+.+.|.|.. -.+
T Consensus 9 lpG~l~~sN~~A~Dw~~---~GLiAygs-hslV~VVDs~s~--q~iqsie~h~s~V~~VrWap~~~p~~llS~~~~~lli 82 (1062)
T KOG1912|consen 9 LPGPLSRSNRNAADWSP---SGLIAYGS-HSLVSVVDSRSL--QLIQSIELHQSAVTSVRWAPAPSPRDLLSPSSSQLLI 82 (1062)
T ss_pred CCCCCCcccccccccCc---cceEEEec-CceEEEEehhhh--hhhhccccCccceeEEEeccCCCchhccCccccceeE
Confidence 34555555556666666 56788844 578888899988 8888999999999999998743 146
Q ss_pred EEEeCCCcEEEEECCcc-----cc---ccceEEEEcc---CCCEEEEEecCCceecCeeEEEeecCCCccee
Q psy7062 73 FTGGEDCRARIWDLSLC-----FI---QQVNALRITP---DKQLLASAEELSCCYCGAAVFVYNSCYPAAVV 133 (148)
Q Consensus 73 ~~~~~~~~i~l~d~~~~-----~~---~~i~~~~~sp---~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~ 133 (148)
++++..|.|.+||.... +. .++..++|-+ +.+.++.+-. +...+.+|+..+++...
T Consensus 83 AsaD~~GrIil~d~~~~s~~~~l~~~~~~~qdl~W~~~rd~Srd~LlaIh-----~ss~lvLwntdtG~k~W 149 (1062)
T KOG1912|consen 83 ASADISGRIILVDFVLASVINWLSHSNDSVQDLCWVPARDDSRDVLLAIH-----GSSTLVLWNTDTGEKFW 149 (1062)
T ss_pred EeccccCcEEEEEehhhhhhhhhcCCCcchhheeeeeccCcchheeEEec-----CCcEEEEEEccCCceee
Confidence 77778899999999877 33 6778888865 4544444332 24479999877776543
No 276
>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
Probab=97.92 E-value=0.00019 Score=53.69 Aligned_cols=112 Identities=11% Similarity=0.078 Sum_probs=81.5
Q ss_pred cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCC---CcEEEEECCcc-
Q psy7062 14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGED---CRARIWDLSLC- 89 (148)
Q Consensus 14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~---~~i~l~d~~~~- 89 (148)
...++|.|.+++--+++|-...++.++|++.. ....+. ...-..+.|+|.+++++.++.+ |.+-+||....
T Consensus 277 Vhdf~W~p~S~~F~vi~g~~pa~~s~~~lr~N---l~~~~P--e~~rNT~~fsp~~r~il~agF~nl~gni~i~~~~~rf 351 (561)
T COG5354 277 VHDFTWEPLSSRFAVISGYMPASVSVFDLRGN---LRFYFP--EQKRNTIFFSPHERYILFAGFDNLQGNIEIFDPAGRF 351 (561)
T ss_pred ceeeeecccCCceeEEecccccceeecccccc---eEEecC--CcccccccccCcccEEEEecCCccccceEEeccCCce
Confidence 45778888865555566567778999999864 333333 3444567899999999998876 67999999877
Q ss_pred -----cc-ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062 90 -----FI-QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA 130 (148)
Q Consensus 90 -----~~-~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~ 130 (148)
+. ....-..|+||++++.+.......+-.+.|.+||+....
T Consensus 352 ~~~~~~~~~n~s~~~wspd~qF~~~~~ts~k~~~Dn~i~l~~v~g~~ 398 (561)
T COG5354 352 KVAGAFNGLNTSYCDWSPDGQFYDTDTTSEKLRVDNSIKLWDVYGAK 398 (561)
T ss_pred EEEEEeecCCceEeeccCCceEEEecCCCcccccCcceEEEEecCch
Confidence 22 555667899999998887765554555679999976443
No 277
>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=97.91 E-value=8.9e-05 Score=52.60 Aligned_cols=104 Identities=8% Similarity=0.161 Sum_probs=74.6
Q ss_pred CCCCccEEEEEecCCeEEEEeCCCCCCC-ceEEecCC-----CCCEEEEEEccCC-CEEEEEeCCCcEEEEECCcc----
Q psy7062 21 SKHLVEMVAALGGYQHIRMYDFGSNNPN-PVINCEGV-----SKNVVEVGFQEDG-KWMFTGGEDCRARIWDLSLC---- 89 (148)
Q Consensus 21 ~~~~~~~l~~~~~d~~v~~~d~~~~~~~-~~~~~~~~-----~~~i~~~~~sp~~-~~l~~~~~~~~i~l~d~~~~---- 89 (148)
.+...+.+.+ .+|=.|.+|+++-.... .+..++.| +..|++..|+|.. ..+...+..|.|++-|++..
T Consensus 180 ~NsD~et~lS-aDdLrINLWnl~i~D~sFnIVDiKP~nmeeLteVItSaeFhp~~cn~fmYSsSkG~Ikl~DlRq~alcd 258 (460)
T COG5170 180 FNSDKETLLS-ADDLRINLWNLEIIDGSFNIVDIKPHNMEELTEVITSAEFHPEMCNVFMYSSSKGEIKLNDLRQSALCD 258 (460)
T ss_pred ecCchheeee-ccceeeeeccccccCCceEEEeccCccHHHHHHHHhhcccCHhHcceEEEecCCCcEEehhhhhhhhcc
Confidence 3334778888 77789999999754211 12223333 3568889999954 46667778899999999843
Q ss_pred -----------------cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcce
Q psy7062 90 -----------------FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAV 132 (148)
Q Consensus 90 -----------------~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~ 132 (148)
|. ..|..+.|+++|+++++-+ ..++++||......+
T Consensus 259 n~~klfe~~~D~v~~~ff~eivsSISD~kFs~ngryIlsRd-------yltvkiwDvnm~k~p 314 (460)
T COG5170 259 NSKKLFELTIDGVDVDFFEEIVSSISDFKFSDNGRYILSRD-------YLTVKIWDVNMAKNP 314 (460)
T ss_pred CchhhhhhccCcccchhHHHHhhhhcceEEcCCCcEEEEec-------cceEEEEecccccCC
Confidence 11 7788899999999998875 347999999876543
No 278
>KOG1275|consensus
Probab=97.88 E-value=0.00016 Score=57.54 Aligned_cols=93 Identities=15% Similarity=0.197 Sum_probs=76.5
Q ss_pred ccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCC---------CcEEEEECCcc------
Q psy7062 25 VEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGED---------CRARIWDLSLC------ 89 (148)
Q Consensus 25 ~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~---------~~i~l~d~~~~------ 89 (148)
++++..|...|+|.+-|.++. +.+.++..|++.+..++ -.|+.+++++.. ..+++||++..
T Consensus 187 nr~lf~G~t~G~V~LrD~~s~--~~iht~~aHs~siSDfD--v~GNlLitCG~S~R~~~l~~D~FvkVYDLRmmral~PI 262 (1118)
T KOG1275|consen 187 NRNLFCGDTRGTVFLRDPNSF--ETIHTFDAHSGSISDFD--VQGNLLITCGYSMRRYNLAMDPFVKVYDLRMMRALSPI 262 (1118)
T ss_pred CcEEEeecccceEEeecCCcC--ceeeeeeccccceeeee--ccCCeEEEeecccccccccccchhhhhhhhhhhccCCc
Confidence 788888899999999999998 89999999999997664 478999998854 45899999865
Q ss_pred ---------------------------cc---------------------ccceEEEEccCCCEEEEEecCCceecCeeE
Q psy7062 90 ---------------------------FI---------------------QQVNALRITPDKQLLASAEELSCCYCGAAV 121 (148)
Q Consensus 90 ---------------------------~~---------------------~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i 121 (148)
++ ..+..+.++++++.++.+..+| .|
T Consensus 263 ~~~~~P~flrf~Psl~t~~~V~S~sGq~q~vd~~~lsNP~~~~~~v~p~~s~i~~fDiSsn~~alafgd~~g------~v 336 (1118)
T KOG1275|consen 263 QFPYGPQFLRFHPSLTTRLAVTSQSGQFQFVDTATLSNPPAGVKMVNPNGSGISAFDISSNGDALAFGDHEG------HV 336 (1118)
T ss_pred ccccCchhhhhcccccceEEEEecccceeeccccccCCCccceeEEccCCCcceeEEecCCCceEEEecccC------cE
Confidence 00 3377788899999999999877 89
Q ss_pred EEeecC
Q psy7062 122 FVYNSC 127 (148)
Q Consensus 122 ~~~d~~ 127 (148)
.+|--+
T Consensus 337 ~~wa~~ 342 (1118)
T KOG1275|consen 337 NLWADR 342 (1118)
T ss_pred eeecCC
Confidence 999733
No 279
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=97.86 E-value=0.00077 Score=50.47 Aligned_cols=92 Identities=9% Similarity=0.112 Sum_probs=68.3
Q ss_pred EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCC----cEEEEECCcc-
Q psy7062 15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDC----RARIWDLSLC- 89 (148)
Q Consensus 15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~----~i~l~d~~~~- 89 (148)
.+++.+++ |+.++++.....+.+.|++++ +....-+..-.-|+.+.|+|++++++.+-.+| .|+++|...+
T Consensus 405 ~av~vs~d--GK~~vvaNdr~el~vididng--nv~~idkS~~~lItdf~~~~nsr~iAYafP~gy~tq~Iklydm~~~K 480 (668)
T COG4946 405 EAVKVSPD--GKKVVVANDRFELWVIDIDNG--NVRLIDKSEYGLITDFDWHPNSRWIAYAFPEGYYTQSIKLYDMDGGK 480 (668)
T ss_pred EEEEEcCC--CcEEEEEcCceEEEEEEecCC--CeeEecccccceeEEEEEcCCceeEEEecCcceeeeeEEEEecCCCe
Confidence 44555565 898888666678999999998 43333334567799999999999999987765 6999999886
Q ss_pred -cc-----ccceEEEEccCCCEEEEEe
Q psy7062 90 -FI-----QQVNALRITPDKQLLASAE 110 (148)
Q Consensus 90 -~~-----~~i~~~~~sp~~~~l~~~~ 110 (148)
+. +.-.+-+|.|++++|.--+
T Consensus 481 iy~vTT~ta~DfsPaFD~d~ryLYfLs 507 (668)
T COG4946 481 IYDVTTPTAYDFSPAFDPDGRYLYFLS 507 (668)
T ss_pred EEEecCCcccccCcccCCCCcEEEEEe
Confidence 22 4455667888998766554
No 280
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=97.85 E-value=0.0017 Score=47.51 Aligned_cols=105 Identities=9% Similarity=0.110 Sum_probs=72.7
Q ss_pred ccEEEEEecCCeEEEEeCCCCCC---CceEEecC-------CCCCEEEEEEccCCCEEEEEe----------CCCcEEEE
Q psy7062 25 VEMVAALGGYQHIRMYDFGSNNP---NPVINCEG-------VSKNVVEVGFQEDGKWMFTGG----------EDCRARIW 84 (148)
Q Consensus 25 ~~~l~~~~~d~~v~~~d~~~~~~---~~~~~~~~-------~~~~i~~~~~sp~~~~l~~~~----------~~~~i~l~ 84 (148)
+..+.+ +.+|+|.+-|+..... .....+.. ....+..++++|+++.++... ..+.+.++
T Consensus 206 g~~~~v-s~eG~V~~id~~~~~~~~~~~~~~~~~~~~~~~wrP~g~q~ia~~~dg~~lyV~~~~~~~~thk~~~~~V~Vi 284 (352)
T TIGR02658 206 GRLVWP-TYTGKIFQIDLSSGDAKFLPAIEAFTEAEKADGWRPGGWQQVAYHRARDRIYLLADQRAKWTHKTASRFLFVV 284 (352)
T ss_pred CcEEEE-ecCCeEEEEecCCCcceecceeeeccccccccccCCCcceeEEEcCCCCEEEEEecCCccccccCCCCEEEEE
Confidence 666666 4559999999644311 22222211 234455699999999777632 22579999
Q ss_pred ECCcc-----cc--ccceEEEEccCCC-EEEEEecCCceecCeeEEEeecCCCcceecc
Q psy7062 85 DLSLC-----FI--QQVNALRITPDKQ-LLASAEELSCCYCGAAVFVYNSCYPAAVVAS 135 (148)
Q Consensus 85 d~~~~-----~~--~~i~~~~~sp~~~-~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~ 135 (148)
|..+. +. .+++.++++||++ +|++.+.. .+.|.++|..+.+.+...
T Consensus 285 D~~t~kvi~~i~vG~~~~~iavS~Dgkp~lyvtn~~-----s~~VsViD~~t~k~i~~i 338 (352)
T TIGR02658 285 DAKTGKRLRKIELGHEIDSINVSQDAKPLLYALSTG-----DKTLYIFDAETGKELSSV 338 (352)
T ss_pred ECCCCeEEEEEeCCCceeeEEECCCCCeEEEEeCCC-----CCcEEEEECcCCeEEeee
Confidence 99888 22 8899999999999 77777642 237999999988877766
No 281
>KOG1064|consensus
Probab=97.84 E-value=2.7e-05 Score=65.71 Aligned_cols=102 Identities=8% Similarity=0.182 Sum_probs=74.3
Q ss_pred ccEEEEEe---cCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-ccccceEEEEc
Q psy7062 25 VEMVAALG---GYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-FIQQVNALRIT 100 (148)
Q Consensus 25 ~~~l~~~~---~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-~~~~i~~~~~s 100 (148)
+.++++++ +++.+.+||.--...+.... ..|...++++++-|....+++|+++|.+.+||++.. +.+.... ++
T Consensus 2302 ~s~~~tag~s~d~~n~~lwDtl~~~~~s~v~-~~H~~gaT~l~~~P~~qllisggr~G~v~l~D~rqrql~h~~~~--~~ 2378 (2439)
T KOG1064|consen 2302 GSLLATAGRSSDNRNVCLWDTLLPPMNSLVH-TCHDGGATVLAYAPKHQLLISGGRKGEVCLFDIRQRQLRHTFQA--LD 2378 (2439)
T ss_pred ehhhhccccCCCCCcccchhcccCcccceee-eecCCCceEEEEcCcceEEEecCCcCcEEEeehHHHHHHHHhhh--hh
Confidence 34555544 34579999986542122222 569999999999999999999999999999999887 4321222 44
Q ss_pred cCCCEEEEEecCCceecCeeEEEeecCCCcceeccC
Q psy7062 101 PDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVASN 136 (148)
Q Consensus 101 p~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~~ 136 (148)
...++++++..| .+++|++..........
T Consensus 2379 -~~~~f~~~ss~g------~ikIw~~s~~~ll~~~p 2407 (2439)
T KOG1064|consen 2379 -TREYFVTGSSEG------NIKIWRLSEFGLLHTFP 2407 (2439)
T ss_pred -hhheeeccCccc------ceEEEEccccchhhcCc
Confidence 566889999877 89999998776655443
No 282
>KOG1334|consensus
Probab=97.84 E-value=0.00013 Score=54.38 Aligned_cols=109 Identities=19% Similarity=0.261 Sum_probs=82.3
Q ss_pred CcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCC----------CceEE-ecCCCC--CEEEEEE-ccCCCEEEEEeCC
Q psy7062 13 GQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNP----------NPVIN-CEGVSK--NVVEVGF-QEDGKWMFTGGED 78 (148)
Q Consensus 13 ~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~----------~~~~~-~~~~~~--~i~~~~~-sp~~~~l~~~~~~ 78 (148)
+..+++|+++. +++|++ .+|-.|.+|.-.-+.. ..+.. +++|.. .|.++.| -|...++++|+.-
T Consensus 338 ~ITgl~Ysh~~-sElLaS-YnDe~IYLF~~~~~~G~~p~~~s~~~~~~k~vYKGHrN~~TVKgVNFfGPrsEyVvSGSDC 415 (559)
T KOG1334|consen 338 NITGLVYSHDG-SELLAS-YNDEDIYLFNKSMGDGSEPDPSSPREQYVKRVYKGHRNSRTVKGVNFFGPRSEYVVSGSDC 415 (559)
T ss_pred cceeEEecCCc-cceeee-ecccceEEeccccccCCCCCCCcchhhccchhhcccccccccceeeeccCccceEEecCcc
Confidence 35789998765 788888 8888898885442211 11222 677753 4777775 5888999999999
Q ss_pred CcEEEEECCcc--c---c---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCC
Q psy7062 79 CRARIWDLSLC--F---I---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYP 129 (148)
Q Consensus 79 ~~i~l~d~~~~--~---~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~ 129 (148)
|.|.+|+=++. + + .-++|+.-+|--..|++++-|- .|+||-....
T Consensus 416 GhIFiW~K~t~eii~~MegDr~VVNCLEpHP~~PvLAsSGid~------DVKIWTP~~~ 468 (559)
T KOG1334|consen 416 GHIFIWDKKTGEIIRFMEGDRHVVNCLEPHPHLPVLASSGIDH------DVKIWTPLTA 468 (559)
T ss_pred ceEEEEecchhHHHHHhhcccceEeccCCCCCCchhhccCCcc------ceeeecCCcc
Confidence 99999999888 2 2 6688888899999999998766 8999987433
No 283
>KOG3914|consensus
Probab=97.83 E-value=8.1e-05 Score=53.89 Aligned_cols=70 Identities=14% Similarity=0.364 Sum_probs=57.3
Q ss_pred EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEE-ecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc
Q psy7062 15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVIN-CEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC 89 (148)
Q Consensus 15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~-~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~ 89 (148)
..++++++ .+.+.++..|..|++-..... ..+.. +.||+..|..+++-++ ..|++++.|+++++||+.++
T Consensus 155 ~dVavS~D--~~~IitaDRDEkIRvs~ypa~--f~IesfclGH~eFVS~isl~~~-~~LlS~sGD~tlr~Wd~~sg 225 (390)
T KOG3914|consen 155 LDVAVSPD--DQFIITADRDEKIRVSRYPAT--FVIESFCLGHKEFVSTISLTDN-YLLLSGSGDKTLRLWDITSG 225 (390)
T ss_pred heeeecCC--CCEEEEecCCceEEEEecCcc--cchhhhccccHhheeeeeeccC-ceeeecCCCCcEEEEecccC
Confidence 46777787 689999999999999888765 44544 4579999999988764 44899999999999999987
No 284
>KOG1645|consensus
Probab=97.83 E-value=8.7e-05 Score=54.05 Aligned_cols=87 Identities=14% Similarity=0.177 Sum_probs=65.7
Q ss_pred EEEEeCCCCCCCceEEecCCCCCEEEEEEccCCC-EEEEEeCCCcEEEEECCcc-----cc--ccceEEEEccCCC-EEE
Q psy7062 37 IRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGK-WMFTGGEDCRARIWDLSLC-----FI--QQVNALRITPDKQ-LLA 107 (148)
Q Consensus 37 v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~-~l~~~~~~~~i~l~d~~~~-----~~--~~i~~~~~sp~~~-~l~ 107 (148)
+++.+..+. +...-+.++...|..++|||..+ .+..++.+.+|++.|+++. +. ..+++.+|.-+.. ++.
T Consensus 175 v~~l~~~~f--kssq~lp~~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~~vssy~a~~~~wSC~wDlde~h~IY 252 (463)
T KOG1645|consen 175 VQKLESHDF--KSSQILPGEGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSCVVSSYIAYNQIWSCCWDLDERHVIY 252 (463)
T ss_pred eEEeccCCc--chhhcccccchhhhhhccCccccceeeeeccCceEEEEecccceeeeheeccCCceeeeeccCCcceeE
Confidence 444444444 44445566788899999999877 6788999999999999988 22 8899999998666 455
Q ss_pred EEecCCceecCeeEEEeecCCCcc
Q psy7062 108 SAEELSCCYCGAAVFVYNSCYPAA 131 (148)
Q Consensus 108 ~~~~d~~~~~~~~i~~~d~~~~~~ 131 (148)
.|-..| .|.+||.+.++.
T Consensus 253 aGl~nG------~VlvyD~R~~~~ 270 (463)
T KOG1645|consen 253 AGLQNG------MVLVYDMRQPEG 270 (463)
T ss_pred EeccCc------eEEEEEccCCCc
Confidence 555544 899999997764
No 285
>KOG4532|consensus
Probab=97.83 E-value=0.0021 Score=44.95 Aligned_cols=110 Identities=15% Similarity=0.062 Sum_probs=78.8
Q ss_pred cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEe-cCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc---
Q psy7062 14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINC-EGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC--- 89 (148)
Q Consensus 14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~-~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~--- 89 (148)
...++++++ +..+++.++...|..|.++......+... ...+..=.+.+|+.....++++..||++-+||++..
T Consensus 161 ~ns~~~snd--~~~~~~Vgds~~Vf~y~id~~sey~~~~~~a~t~D~gF~~S~s~~~~~FAv~~Qdg~~~I~DVR~~~tp 238 (344)
T KOG4532|consen 161 QNSLHYSND--PSWGSSVGDSRRVFRYAIDDESEYIENIYEAPTSDHGFYNSFSENDLQFAVVFQDGTCAIYDVRNMATP 238 (344)
T ss_pred eeeeEEcCC--CceEEEecCCCcceEEEeCCccceeeeeEecccCCCceeeeeccCcceEEEEecCCcEEEEEecccccc
Confidence 466777777 77778878888999999986532333322 222334456788999999999999999999999876
Q ss_pred --cc--------ccceEEEEccCCC--EEEEEecCCceecCeeEEEeecCCCcc
Q psy7062 90 --FI--------QQVNALRITPDKQ--LLASAEELSCCYCGAAVFVYNSCYPAA 131 (148)
Q Consensus 90 --~~--------~~i~~~~~sp~~~--~l~~~~~d~~~~~~~~i~~~d~~~~~~ 131 (148)
.. +.++.+.|++.|. +|+..-. ...+.+.|.++...
T Consensus 239 m~~~sstrp~hnGa~R~c~Fsl~g~lDLLf~sEh------fs~~hv~D~R~~~~ 286 (344)
T KOG4532|consen 239 MAEISSTRPHHNGAFRVCRFSLYGLLDLLFISEH------FSRVHVVDTRNYVN 286 (344)
T ss_pred hhhhcccCCCCCCceEEEEecCCCcceEEEEecC------cceEEEEEcccCce
Confidence 11 7889999998664 4444433 33789999887654
No 286
>KOG3621|consensus
Probab=97.77 E-value=0.00023 Score=55.12 Aligned_cols=102 Identities=16% Similarity=0.132 Sum_probs=79.4
Q ss_pred EEEeCCCCccEEEEEecCCeEEEEeCCCCCCCce-EEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc------
Q psy7062 17 TVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPV-INCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC------ 89 (148)
Q Consensus 17 ~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~-~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~------ 89 (148)
.++|.. +++++.|+..|.+.+|+-..+ ..+ ....+....+....++++..+++.|+-.|.|.++-++..
T Consensus 39 Tc~dst--~~~l~~GsS~G~lyl~~R~~~--~~~~~~~~~~~~~~~~~~vs~~e~lvAagt~~g~V~v~ql~~~~p~~~~ 114 (726)
T KOG3621|consen 39 TCVDAT--EEYLAMGSSAGSVYLYNRHTG--EMRKLKNEGATGITCVRSVSSVEYLVAAGTASGRVSVFQLNKELPRDLD 114 (726)
T ss_pred EEeecC--CceEEEecccceEEEEecCch--hhhcccccCccceEEEEEecchhHhhhhhcCCceEEeehhhccCCCcce
Confidence 344555 899999999999999998877 332 333334556677788999999999999999999988766
Q ss_pred -cc-------ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCC
Q psy7062 90 -FI-------QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCY 128 (148)
Q Consensus 90 -~~-------~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~ 128 (148)
+. .+|++++|++++..+.+|...| +|..-.+.+
T Consensus 115 ~~t~~d~~~~~rVTal~Ws~~~~k~ysGD~~G------kv~~~~L~s 155 (726)
T KOG3621|consen 115 YVTPCDKSHKCRVTALEWSKNGMKLYSGDSQG------KVVLTELDS 155 (726)
T ss_pred eeccccccCCceEEEEEecccccEEeecCCCc------eEEEEEech
Confidence 11 6799999999999999999877 666655543
No 287
>KOG2315|consensus
Probab=97.76 E-value=0.002 Score=48.84 Aligned_cols=113 Identities=12% Similarity=0.085 Sum_probs=78.4
Q ss_pred cEEEEEeCCCCccEEEEEec-C---------CeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEE--EeCCCcE
Q psy7062 14 QISTVFDSKHLVEMVAALGG-Y---------QHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFT--GGEDCRA 81 (148)
Q Consensus 14 ~~~~~~~~~~~~~~l~~~~~-d---------~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~--~~~~~~i 81 (148)
.....|.+...+-++++.++ | .++.+.+++.. .....+. -.+.|-++.|+|+++-++. |=.-..+
T Consensus 220 kvqm~WN~~gt~LLvLastdVDktn~SYYGEq~Lyll~t~g~--s~~V~L~-k~GPVhdv~W~~s~~EF~VvyGfMPAkv 296 (566)
T KOG2315|consen 220 KVQMKWNKLGTALLVLASTDVDKTNASYYGEQTLYLLATQGE--SVSVPLL-KEGPVHDVTWSPSGREFAVVYGFMPAKV 296 (566)
T ss_pred eeEEEeccCCceEEEEEEEeecCCCccccccceEEEEEecCc--eEEEecC-CCCCceEEEECCCCCEEEEEEecccceE
Confidence 35667777665555544221 1 25666677632 3344443 4788999999999986544 4445789
Q ss_pred EEEECCcc----cc-ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcce
Q psy7062 82 RIWDLSLC----FI-QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAV 132 (148)
Q Consensus 82 ~l~d~~~~----~~-~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~ 132 (148)
-+||++.. |. ++-+++-|+|.|++++.++.+. -.+.+-+||+.+.+.+
T Consensus 297 tifnlr~~~v~df~egpRN~~~fnp~g~ii~lAGFGN---L~G~mEvwDv~n~K~i 349 (566)
T KOG2315|consen 297 TIFNLRGKPVFDFPEGPRNTAFFNPHGNIILLAGFGN---LPGDMEVWDVPNRKLI 349 (566)
T ss_pred EEEcCCCCEeEeCCCCCccceEECCCCCEEEEeecCC---CCCceEEEeccchhhc
Confidence 99999876 33 8889999999999988888654 3457999998875544
No 288
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=97.75 E-value=0.0023 Score=53.27 Aligned_cols=107 Identities=14% Similarity=0.147 Sum_probs=73.6
Q ss_pred CcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCC---------------CCCEEEEEEccCCCEE-EEEe
Q psy7062 13 GQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGV---------------SKNVVEVGFQEDGKWM-FTGG 76 (148)
Q Consensus 13 ~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~---------------~~~i~~~~~sp~~~~l-~~~~ 76 (148)
.+..+++++.. +.++++.+.++.|++||..++ . +..+.+. -....+++++|+++.+ ++.+
T Consensus 684 ~P~gVa~dp~~-g~LyVad~~~~~I~v~d~~~g--~-v~~~~G~G~~~~~~g~~~~~~~~~~P~GIavspdG~~LYVADs 759 (1057)
T PLN02919 684 SPWDVCFEPVN-EKVYIAMAGQHQIWEYNISDG--V-TRVFSGDGYERNLNGSSGTSTSFAQPSGISLSPDLKELYIADS 759 (1057)
T ss_pred CCeEEEEecCC-CeEEEEECCCCeEEEEECCCC--e-EEEEecCCccccCCCCccccccccCccEEEEeCCCCEEEEEEC
Confidence 35678888842 667777677889999999876 2 2222111 1245679999999855 4555
Q ss_pred CCCcEEEEECCcc---c-c-------------------------ccceEEEEccCCCEEEEEecCCceecCeeEEEeecC
Q psy7062 77 EDCRARIWDLSLC---F-I-------------------------QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSC 127 (148)
Q Consensus 77 ~~~~i~l~d~~~~---~-~-------------------------~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~ 127 (148)
.++.|++||+.++ + . .....++++++|+.+++-..++ +|++||..
T Consensus 760 ~n~~Irv~D~~tg~~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~P~Gvavd~dG~LYVADs~N~------rIrviD~~ 833 (1057)
T PLN02919 760 ESSSIRALDLKTGGSRLLAGGDPTFSDNLFKFGDHDGVGSEVLLQHPLGVLCAKDGQIYVADSYNH------KIKKLDPA 833 (1057)
T ss_pred CCCeEEEEECCCCcEEEEEecccccCcccccccCCCCchhhhhccCCceeeEeCCCcEEEEECCCC------EEEEEECC
Confidence 6789999998753 0 0 1346788999998776666655 89999986
Q ss_pred CC
Q psy7062 128 YP 129 (148)
Q Consensus 128 ~~ 129 (148)
+.
T Consensus 834 tg 835 (1057)
T PLN02919 834 TK 835 (1057)
T ss_pred CC
Confidence 54
No 289
>KOG2041|consensus
Probab=97.72 E-value=0.00075 Score=52.93 Aligned_cols=97 Identities=14% Similarity=0.172 Sum_probs=78.0
Q ss_pred EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCC-------------CceEEecCCCCCEEEEEEccCCCEEEEEeCCCcE
Q psy7062 15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNP-------------NPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRA 81 (148)
Q Consensus 15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~-------------~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i 81 (148)
.++.|.-. ..+++.|+.||.+++..+.+... ..-.++.+|...|.-+-|+-+...+.+.+.+|.|
T Consensus 18 ~c~~WNke--~gyIAcgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~sV~vvTWNe~~QKLTtSDt~GlI 95 (1189)
T KOG2041|consen 18 HCAEWNKE--SGYIACGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNASVMVVTWNENNQKLTTSDTSGLI 95 (1189)
T ss_pred EEEEEccc--CCeEEeccccceeEEEEccccCCcccccccccccccchhhhhccCcceEEEEEeccccccccccCCCceE
Confidence 56777766 78999999999999998865421 1123567899999999999999999999999999
Q ss_pred EEEECCcc------cc----ccceEEEEccCCCEEEEEecCC
Q psy7062 82 RIWDLSLC------FI----QQVNALRITPDKQLLASAEELS 113 (148)
Q Consensus 82 ~l~d~~~~------~~----~~i~~~~~sp~~~~l~~~~~d~ 113 (148)
.+|=+-.+ .. +-+.+++|+.+|+.+...=.||
T Consensus 96 iVWmlykgsW~EEMiNnRnKSvV~SmsWn~dG~kIcIvYeDG 137 (1189)
T KOG2041|consen 96 IVWMLYKGSWCEEMINNRNKSVVVSMSWNLDGTKICIVYEDG 137 (1189)
T ss_pred EEEeeecccHHHHHhhCcCccEEEEEEEcCCCcEEEEEEccC
Confidence 99999877 11 6688999999998877766666
No 290
>KOG1354|consensus
Probab=97.70 E-value=0.00027 Score=50.71 Aligned_cols=107 Identities=7% Similarity=0.167 Sum_probs=76.1
Q ss_pred EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCc---------------------------------eEEe-cCCCCCE
Q psy7062 15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNP---------------------------------VINC-EGVSKNV 60 (148)
Q Consensus 15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~---------------------------------~~~~-~~~~~~i 60 (148)
....|..+.+...+.....|.++++|.+.....+. .+.+ .+|+..|
T Consensus 88 nkIrw~~~~n~a~FLlstNdktiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~prRv~aNaHtyhi 167 (433)
T KOG1354|consen 88 NKIRWLDDGNLAEFLLSTNDKTIKLWKIRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPRRVYANAHTYHI 167 (433)
T ss_pred hhceecCCCCccEEEEecCCcceeeeeeeccccccccccccccCCCCccceeeceeeccccceeeeeeeeeccccceeEe
Confidence 45566555555555554899999999986542111 1112 2477889
Q ss_pred EEEEEccCCCEEEEEeCCCcEEEEECCcc---cc-------------ccceEEEEcc-CCCEEEEEecCCceecCeeEEE
Q psy7062 61 VEVGFQEDGKWMFTGGEDCRARIWDLSLC---FI-------------QQVNALRITP-DKQLLASAEELSCCYCGAAVFV 123 (148)
Q Consensus 61 ~~~~~sp~~~~l~~~~~~~~i~l~d~~~~---~~-------------~~i~~~~~sp-~~~~l~~~~~d~~~~~~~~i~~ 123 (148)
.+++++.|+..+++++ |=.|.+|++... |. .-|++..||| ....++-.+..| .|++
T Consensus 168 NSIS~NsD~Et~lSAD-dLRINLWnlei~d~sFnIVDIKP~nmEeLteVITsaEFhp~~cn~f~YSSSKG------tIrL 240 (433)
T KOG1354|consen 168 NSISVNSDKETFLSAD-DLRINLWNLEIIDQSFNIVDIKPANMEELTEVITSAEFHPHHCNVFVYSSSKG------TIRL 240 (433)
T ss_pred eeeeecCccceEeecc-ceeeeeccccccCCceeEEEccccCHHHHHHHHhhhccCHhHccEEEEecCCC------cEEE
Confidence 9999999999999885 557889988654 11 5578889999 456777777756 8999
Q ss_pred eecCC
Q psy7062 124 YNSCY 128 (148)
Q Consensus 124 ~d~~~ 128 (148)
.|.+.
T Consensus 241 cDmR~ 245 (433)
T KOG1354|consen 241 CDMRQ 245 (433)
T ss_pred eechh
Confidence 99884
No 291
>KOG0309|consensus
Probab=97.65 E-value=0.00015 Score=56.69 Aligned_cols=100 Identities=12% Similarity=0.179 Sum_probs=75.2
Q ss_pred CccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc------cc---ccc
Q psy7062 24 LVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC------FI---QQV 94 (148)
Q Consensus 24 ~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~------~~---~~i 94 (148)
....+++++.|..+..||+++.. .++.....-......++|+...-.++..+....+++||.+.+ ++ ..+
T Consensus 126 ~pdVlatcsvdt~vh~wd~rSp~-~p~ys~~~w~s~asqVkwnyk~p~vlasshg~~i~vwd~r~gs~pl~s~K~~vs~v 204 (1081)
T KOG0309|consen 126 HPDVLATCSVDTYVHAWDMRSPH-RPFYSTSSWRSAASQVKWNYKDPNVLASSHGNDIFVWDLRKGSTPLCSLKGHVSSV 204 (1081)
T ss_pred CCcceeeccccccceeeeccCCC-cceeeeecccccCceeeecccCcchhhhccCCceEEEeccCCCcceEEecccceee
Confidence 37889999999999999999873 566666555566778999985555555566778999999987 33 556
Q ss_pred eEEEEcc-CCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062 95 NALRITP-DKQLLASAEELSCCYCGAAVFVYNSCYPA 130 (148)
Q Consensus 95 ~~~~~sp-~~~~l~~~~~d~~~~~~~~i~~~d~~~~~ 130 (148)
..+.|.. -...+.+.+.|+ +|++||.....
T Consensus 205 n~~~fnr~~~s~~~s~~~d~------tvkfw~y~kSt 235 (1081)
T KOG0309|consen 205 NSIDFNRFKYSEIMSSSNDG------TVKFWDYSKST 235 (1081)
T ss_pred ehHHHhhhhhhhhcccCCCC------ceeeecccccc
Confidence 6667765 344677888888 99999977543
No 292
>KOG1334|consensus
Probab=97.64 E-value=0.00022 Score=53.16 Aligned_cols=107 Identities=19% Similarity=0.247 Sum_probs=82.6
Q ss_pred EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCce-EEecCCCCCEEEEEEccC--CCEEEEEeCCCcEEEEECCcc--
Q psy7062 15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPV-INCEGVSKNVVEVGFQED--GKWMFTGGEDCRARIWDLSLC-- 89 (148)
Q Consensus 15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~-~~~~~~~~~i~~~~~sp~--~~~l~~~~~~~~i~l~d~~~~-- 89 (148)
+.+-|... |..|++++.|..+.+||.... ++. .-..+|...|...+|-|. .+.+++++.||.+++-.+...
T Consensus 146 ntV~FN~~--Gd~l~SgSDD~~vv~WdW~~~--~~~l~f~SGH~~NvfQaKFiP~s~d~ti~~~s~dgqvr~s~i~~t~~ 221 (559)
T KOG1334|consen 146 NTVHFNQR--GDVLASGSDDLQVVVWDWVSG--SPKLSFESGHCNNVFQAKFIPFSGDRTIVTSSRDGQVRVSEILETGY 221 (559)
T ss_pred ceeeeccc--CceeeccCccceEEeehhhcc--CcccccccccccchhhhhccCCCCCcCceeccccCceeeeeeccccc
Confidence 44445555 999999999999999999887 444 444579888888889883 468999999999998877543
Q ss_pred ------cc---ccceEEEEccCC-CEEEEEecCCceecCeeEEEeecCCCcc
Q psy7062 90 ------FI---QQVNALRITPDK-QLLASAEELSCCYCGAAVFVYNSCYPAA 131 (148)
Q Consensus 90 ------~~---~~i~~~~~sp~~-~~l~~~~~d~~~~~~~~i~~~d~~~~~~ 131 (148)
+. +++..++.-|+. ..|.+++.|+ .+.-+|++...+
T Consensus 222 ~e~t~rl~~h~g~vhklav~p~sp~~f~S~geD~------~v~~~Dlr~~~p 267 (559)
T KOG1334|consen 222 VENTKRLAPHEGPVHKLAVEPDSPKPFLSCGEDA------VVFHIDLRQDVP 267 (559)
T ss_pred eecceecccccCccceeeecCCCCCccccccccc------ceeeeeeccCCc
Confidence 11 889999999955 5788888888 677778776543
No 293
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=97.62 E-value=0.007 Score=43.68 Aligned_cols=114 Identities=12% Similarity=0.132 Sum_probs=77.6
Q ss_pred eecCcEEEEEeCCCCccEEEEEecC---CeEEEEeCCC--CCCCceEEecCCCCCEEEEEEccCCCEEEEEeCC-CcEEE
Q psy7062 10 TAFGQISTVFDSKHLVEMVAALGGY---QHIRMYDFGS--NNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGED-CRARI 83 (148)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~l~~~~~d---~~v~~~d~~~--~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~-~~i~l 83 (148)
...++.-++++++ .+.|.++..+ +.+--|.++. +....+..........+.++++++|++++++... +.+.+
T Consensus 38 ~~~nptyl~~~~~--~~~LY~v~~~~~~ggvaay~iD~~~G~Lt~ln~~~~~g~~p~yvsvd~~g~~vf~AnY~~g~v~v 115 (346)
T COG2706 38 ELGNPTYLAVNPD--QRHLYVVNEPGEEGGVAAYRIDPDDGRLTFLNRQTLPGSPPCYVSVDEDGRFVFVANYHSGSVSV 115 (346)
T ss_pred ccCCCceEEECCC--CCEEEEEEecCCcCcEEEEEEcCCCCeEEEeeccccCCCCCeEEEECCCCCEEEEEEccCceEEE
Confidence 3445677888887 6666665544 4677776664 4222333333334445889999999999998864 78999
Q ss_pred EECCcc---------cc--cc----------ceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062 84 WDLSLC---------FI--QQ----------VNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA 130 (148)
Q Consensus 84 ~d~~~~---------~~--~~----------i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~ 130 (148)
+-++.. +. .+ +....++|++++|++..- +..+|.+|++....
T Consensus 116 ~p~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DL-----G~Dri~~y~~~dg~ 178 (346)
T COG2706 116 YPLQADGSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPDL-----GTDRIFLYDLDDGK 178 (346)
T ss_pred EEcccCCccccceeeeecCCCCCCccccCCccceeeeCCCCCEEEEeec-----CCceEEEEEcccCc
Confidence 998663 11 22 778899999999888764 24579999988544
No 294
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=97.55 E-value=0.014 Score=42.10 Aligned_cols=108 Identities=11% Similarity=0.203 Sum_probs=75.2
Q ss_pred cCcEEEEEeCCCCccEEEEE-ecCCeEEEEeCCCCCCCceEEecC---------CCCCEEEEEEccCCCEEEEEeCC-Cc
Q psy7062 12 FGQISTVFDSKHLVEMVAAL-GGYQHIRMYDFGSNNPNPVINCEG---------VSKNVVEVGFQEDGKWMFTGGED-CR 80 (148)
Q Consensus 12 ~~~~~~~~~~~~~~~~l~~~-~~d~~v~~~d~~~~~~~~~~~~~~---------~~~~i~~~~~sp~~~~l~~~~~~-~~ 80 (148)
.|+.-++|+|+ +++.... -.+++|.+|..+... ..+..++. -......|.++|||++|..+.+. ..
T Consensus 191 ~GPRHi~FHpn--~k~aY~v~EL~stV~v~~y~~~~-g~~~~lQ~i~tlP~dF~g~~~~aaIhis~dGrFLYasNRg~ds 267 (346)
T COG2706 191 AGPRHIVFHPN--GKYAYLVNELNSTVDVLEYNPAV-GKFEELQTIDTLPEDFTGTNWAAAIHISPDGRFLYASNRGHDS 267 (346)
T ss_pred CCcceEEEcCC--CcEEEEEeccCCEEEEEEEcCCC-ceEEEeeeeccCccccCCCCceeEEEECCCCCEEEEecCCCCe
Confidence 46788999999 5554443 467899999998741 22333322 13567788999999999887653 46
Q ss_pred EEEEECCcc---cc---------ccceEEEEccCCCEEEEEecCCceecCeeEEEeecC
Q psy7062 81 ARIWDLSLC---FI---------QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSC 127 (148)
Q Consensus 81 i~l~d~~~~---~~---------~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~ 127 (148)
|-+|.+... +. ...+.+.++|++++|+++..++ ..|.+|...
T Consensus 268 I~~f~V~~~~g~L~~~~~~~teg~~PR~F~i~~~g~~Liaa~q~s-----d~i~vf~~d 321 (346)
T COG2706 268 IAVFSVDPDGGKLELVGITPTEGQFPRDFNINPSGRFLIAANQKS-----DNITVFERD 321 (346)
T ss_pred EEEEEEcCCCCEEEEEEEeccCCcCCccceeCCCCCEEEEEccCC-----CcEEEEEEc
Confidence 777777543 11 4478899999999999999866 246666544
No 295
>KOG0309|consensus
Probab=97.51 E-value=0.00048 Score=54.06 Aligned_cols=111 Identities=15% Similarity=0.277 Sum_probs=80.3
Q ss_pred EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCce-EEecCCCCCEEEEEEccCC-CEEEEEeCCCcEEEEECCcc---
Q psy7062 15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPV-INCEGVSKNVVEVGFQEDG-KWMFTGGEDCRARIWDLSLC--- 89 (148)
Q Consensus 15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~-~~~~~~~~~i~~~~~sp~~-~~l~~~~~~~~i~l~d~~~~--- 89 (148)
..+-|++.....+-++......-.+|++.-...+.+ ..+-+|+..|+.+.|+|.. ..+++++-|-.++.||+++.
T Consensus 71 ad~qws~h~a~~~wiVsts~qkaiiwnlA~ss~~aIef~lhghsraitd~n~~~q~pdVlatcsvdt~vh~wd~rSp~~p 150 (1081)
T KOG0309|consen 71 ADVQWSPHPAKPYWIVSTSNQKAIIWNLAKSSSNAIEFVLHGHSRAITDINFNPQHPDVLATCSVDTYVHAWDMRSPHRP 150 (1081)
T ss_pred cceecccCCCCceeEEecCcchhhhhhhhcCCccceEEEEecCccceeccccCCCCCcceeeccccccceeeeccCCCcc
Confidence 345566655566666656677888999865422333 3556899999999999965 47899999999999999988
Q ss_pred cc------ccceEEEEcc-CCCEEEEEecCCceecCeeEEEeecCCCcce
Q psy7062 90 FI------QQVNALRITP-DKQLLASAEELSCCYCGAAVFVYNSCYPAAV 132 (148)
Q Consensus 90 ~~------~~i~~~~~sp-~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~ 132 (148)
+. .+...++|+. ++..+++ +. +..|.+||.+....+
T Consensus 151 ~ys~~~w~s~asqVkwnyk~p~vlas-sh------g~~i~vwd~r~gs~p 193 (1081)
T KOG0309|consen 151 FYSTSSWRSAASQVKWNYKDPNVLAS-SH------GNDIFVWDLRKGSTP 193 (1081)
T ss_pred eeeeecccccCceeeecccCcchhhh-cc------CCceEEEeccCCCcc
Confidence 21 6678899987 5555544 43 226999999987654
No 296
>KOG1275|consensus
Probab=97.49 E-value=0.00079 Score=53.86 Aligned_cols=118 Identities=14% Similarity=0.059 Sum_probs=83.7
Q ss_pred ccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----cc-ccceEEE
Q psy7062 25 VEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-----FI-QQVNALR 98 (148)
Q Consensus 25 ~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-----~~-~~i~~~~ 98 (148)
+..+..|+-...+..+|+++. +..+...-..+.++-+ ..+++.+.+|+..|+|.+-|.++. |. ..-.-..
T Consensus 147 ~~~~i~Gg~Q~~li~~Dl~~~--~e~r~~~v~a~~v~im--R~Nnr~lf~G~t~G~V~LrD~~s~~~iht~~aHs~siSD 222 (1118)
T KOG1275|consen 147 PSTLIMGGLQEKLIHIDLNTE--KETRTTNVSASGVTIM--RYNNRNLFCGDTRGTVFLRDPNSFETIHTFDAHSGSISD 222 (1118)
T ss_pred Ccceeecchhhheeeeecccc--eeeeeeeccCCceEEE--EecCcEEEeecccceEEeecCCcCceeeeeeccccceee
Confidence 455667666667777799876 3333332223345444 557899999999999999999987 33 2223345
Q ss_pred EccCCCEEEEEecCCce---ecCeeEEEeecCCCcceeccCcccCcceeec
Q psy7062 99 ITPDKQLLASAEELSCC---YCGAAVFVYNSCYPAAVVASNTLVKPQVTRA 146 (148)
Q Consensus 99 ~sp~~~~l~~~~~d~~~---~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~ 146 (148)
|+-.|+.|++++..... +....|++||+++.+....++..+.|++.|.
T Consensus 223 fDv~GNlLitCG~S~R~~~l~~D~FvkVYDLRmmral~PI~~~~~P~flrf 273 (1118)
T KOG1275|consen 223 FDVQGNLLITCGYSMRRYNLAMDPFVKVYDLRMMRALSPIQFPYGPQFLRF 273 (1118)
T ss_pred eeccCCeEEEeecccccccccccchhhhhhhhhhhccCCcccccCchhhhh
Confidence 55689999998765432 3456799999999999999998999988664
No 297
>PRK04043 tolB translocation protein TolB; Provisional
Probab=97.46 E-value=0.011 Score=44.54 Aligned_cols=105 Identities=10% Similarity=0.038 Sum_probs=65.0
Q ss_pred EEEEEeCCCCccEEEEEe-cCC--eEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCC---------CcEE
Q psy7062 15 ISTVFDSKHLVEMVAALG-GYQ--HIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGED---------CRAR 82 (148)
Q Consensus 15 ~~~~~~~~~~~~~l~~~~-~d~--~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~---------~~i~ 82 (148)
....|+|+ |+.++..+ ..+ .|.+.|+.++ +..+... .... ...|+|||+.++..... ..+.
T Consensus 280 ~~p~~SPD--G~~I~F~Sdr~g~~~Iy~~dl~~g--~~~rlt~-~g~~--~~~~SPDG~~Ia~~~~~~~~~~~~~~~~I~ 352 (419)
T PRK04043 280 VNGNFVED--DKRIVFVSDRLGYPNIFMKKLNSG--SVEQVVF-HGKN--NSSVSTYKNYIVYSSRETNNEFGKNTFNLY 352 (419)
T ss_pred CccEECCC--CCEEEEEECCCCCceEEEEECCCC--CeEeCcc-CCCc--CceECCCCCEEEEEEcCCCcccCCCCcEEE
Confidence 34568888 55444434 223 5777788876 3322221 1111 24899999988665543 2577
Q ss_pred EEECCcc----cc--ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCC
Q psy7062 83 IWDLSLC----FI--QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYP 129 (148)
Q Consensus 83 l~d~~~~----~~--~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~ 129 (148)
+.|+.++ +. .......|+|||+.++.....+ ....+...++...
T Consensus 353 v~d~~~g~~~~LT~~~~~~~p~~SPDG~~I~f~~~~~---~~~~L~~~~l~g~ 402 (419)
T PRK04043 353 LISTNSDYIRRLTANGVNQFPRFSSDGGSIMFIKYLG---NQSALGIIRLNYN 402 (419)
T ss_pred EEECCCCCeEECCCCCCcCCeEECCCCCEEEEEEccC---CcEEEEEEecCCC
Confidence 8888776 33 3334578999999888877654 3445777787643
No 298
>KOG1912|consensus
Probab=97.43 E-value=0.00073 Score=53.30 Aligned_cols=96 Identities=14% Similarity=0.109 Sum_probs=77.6
Q ss_pred cEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEE---------eCCCcEEEEECCcc----cc-
Q psy7062 26 EMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTG---------GEDCRARIWDLSLC----FI- 91 (148)
Q Consensus 26 ~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~---------~~~~~i~l~d~~~~----~~- 91 (148)
.+++.|.+.|+|.++|+.++ ..-+.+..|++.|.++.|-...+++-.+ ..-+.+.+-|++++ |.
T Consensus 438 pLvAvGT~sGTV~vvdvst~--~v~~~fsvht~~VkgleW~g~sslvSfsys~~n~~sg~vrN~l~vtdLrtGlsk~fR~ 515 (1062)
T KOG1912|consen 438 PLVAVGTNSGTVDVVDVSTN--AVAASFSVHTSLVKGLEWLGNSSLVSFSYSHVNSASGGVRNDLVVTDLRTGLSKRFRG 515 (1062)
T ss_pred eeEEeecCCceEEEEEecch--hhhhhhcccccceeeeeeccceeEEEeeeccccccccceeeeEEEEEccccccccccc
Confidence 46889999999999999998 6777888899999999997766654222 12246889999998 32
Q ss_pred ------ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCC
Q psy7062 92 ------QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYP 129 (148)
Q Consensus 92 ------~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~ 129 (148)
.+|..+..+..+++|+....+. -+.+||+++.
T Consensus 516 l~~~despI~~irvS~~~~yLai~Fr~~------plEiwd~kt~ 553 (1062)
T KOG1912|consen 516 LQKPDESPIRAIRVSSSGRYLAILFRRE------PLEIWDLKTL 553 (1062)
T ss_pred CCCCCcCcceeeeecccCceEEEEeccc------chHHHhhccc
Confidence 8899999999999999999877 7889998543
No 299
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=97.42 E-value=0.0024 Score=52.38 Aligned_cols=104 Identities=15% Similarity=0.097 Sum_probs=71.1
Q ss_pred EEEEEeCCCCccEEEEEec---C---CeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeC---CCcEEEEE
Q psy7062 15 ISTVFDSKHLVEMVAALGG---Y---QHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGE---DCRARIWD 85 (148)
Q Consensus 15 ~~~~~~~~~~~~~l~~~~~---d---~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~---~~~i~l~d 85 (148)
..+..+.+++|+++|+.+- . +.+|+|+-+ + ....+.+.-.+--..++|.|.|+++++... ...|.+|.
T Consensus 211 ~~~~ISWRGDG~yFAVss~~~~~~~~R~iRVy~Re-G--~L~stSE~v~gLe~~l~WrPsG~lIA~~q~~~~~~~VvFfE 287 (928)
T PF04762_consen 211 GRVRISWRGDGEYFAVSSVEPETGSRRVIRVYSRE-G--ELQSTSEPVDGLEGALSWRPSGNLIASSQRLPDRHDVVFFE 287 (928)
T ss_pred CceEEEECCCCcEEEEEEEEcCCCceeEEEEECCC-c--eEEeccccCCCccCCccCCCCCCEEEEEEEcCCCcEEEEEe
Confidence 4445556666999999764 2 479999987 3 333333333334467899999999988765 23455665
Q ss_pred CCcc----cc-------ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCC
Q psy7062 86 LSLC----FI-------QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCY 128 (148)
Q Consensus 86 ~~~~----~~-------~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~ 128 (148)
-+.. |. ..+..+.|++++..|+....|. |.+|-..+
T Consensus 288 rNGLrhgeF~l~~~~~~~~v~~l~Wn~ds~iLAv~~~~~-------vqLWt~~N 334 (928)
T PF04762_consen 288 RNGLRHGEFTLRFDPEEEKVIELAWNSDSEILAVWLEDR-------VQLWTRSN 334 (928)
T ss_pred cCCcEeeeEecCCCCCCceeeEEEECCCCCEEEEEecCC-------ceEEEeeC
Confidence 4432 22 6789999999999999977544 78886543
No 300
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=97.41 E-value=0.019 Score=39.68 Aligned_cols=112 Identities=15% Similarity=0.131 Sum_probs=69.5
Q ss_pred eecCcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEec--C-CCCCEEEEEEccCCCEEEEEeCC--------
Q psy7062 10 TAFGQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCE--G-VSKNVVEVGFQEDGKWMFTGGED-------- 78 (148)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~--~-~~~~i~~~~~sp~~~~l~~~~~~-------- 78 (148)
...++..++++... +.++++ .. +.+.++|.+++..+.+.... . .....+.+++.|+|+..++....
T Consensus 38 ~~~~~~G~~~~~~~-g~l~v~-~~-~~~~~~d~~~g~~~~~~~~~~~~~~~~~~ND~~vd~~G~ly~t~~~~~~~~~~~~ 114 (246)
T PF08450_consen 38 DLPGPNGMAFDRPD-GRLYVA-DS-GGIAVVDPDTGKVTVLADLPDGGVPFNRPNDVAVDPDGNLYVTDSGGGGASGIDP 114 (246)
T ss_dssp ESSSEEEEEEECTT-SEEEEE-ET-TCEEEEETTTTEEEEEEEEETTCSCTEEEEEEEE-TTS-EEEEEECCBCTTCGGS
T ss_pred ecCCCceEEEEccC-CEEEEE-Ec-CceEEEecCCCcEEEEeeccCCCcccCCCceEEEcCCCCEEEEecCCCccccccc
Confidence 34456777877432 555555 54 44555599887323333332 1 34568899999999977776543
Q ss_pred CcEEEEECCcc----cc--ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCC
Q psy7062 79 CRARIWDLSLC----FI--QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYP 129 (148)
Q Consensus 79 ~~i~l~d~~~~----~~--~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~ 129 (148)
+.+..++.... .. ...+.++|+|+++.|..+... ..+|..+++...
T Consensus 115 g~v~~~~~~~~~~~~~~~~~~pNGi~~s~dg~~lyv~ds~-----~~~i~~~~~~~~ 166 (246)
T PF08450_consen 115 GSVYRIDPDGKVTVVADGLGFPNGIAFSPDGKTLYVADSF-----NGRIWRFDLDAD 166 (246)
T ss_dssp EEEEEEETTSEEEEEEEEESSEEEEEEETTSSEEEEEETT-----TTEEEEEEEETT
T ss_pred cceEEECCCCeEEEEecCcccccceEECCcchheeecccc-----cceeEEEecccc
Confidence 45777777722 22 667889999999987765432 226888887643
No 301
>KOG1832|consensus
Probab=97.41 E-value=0.00023 Score=56.91 Aligned_cols=111 Identities=15% Similarity=0.154 Sum_probs=84.9
Q ss_pred cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCC--cEEEEECCcccc
Q psy7062 14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDC--RARIWDLSLCFI 91 (148)
Q Consensus 14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~--~i~l~d~~~~~~ 91 (148)
-.+++|+.. .+.|++|+-.|.|++|++.++ ........|.+.++.+.=+.+|..+++.+... ..-+|+..+-+.
T Consensus 1104 fTc~afs~~--~~hL~vG~~~Geik~~nv~sG--~~e~s~ncH~SavT~vePs~dgs~~Ltsss~S~PlsaLW~~~s~~~ 1179 (1516)
T KOG1832|consen 1104 FTCIAFSGG--TNHLAVGSHAGEIKIFNVSSG--SMEESVNCHQSAVTLVEPSVDGSTQLTSSSSSSPLSALWDASSTGG 1179 (1516)
T ss_pred eeeEEeecC--CceEEeeeccceEEEEEccCc--cccccccccccccccccccCCcceeeeeccccCchHHHhccccccC
Confidence 467888877 788999999999999999999 77778888999999999899999887765433 466999976521
Q ss_pred -----ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceec
Q psy7062 92 -----QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVA 134 (148)
Q Consensus 92 -----~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~ 134 (148)
..-.++.|+...++-+.|+... ...+||+.+..+...
T Consensus 1180 ~~Hsf~ed~~vkFsn~~q~r~~gt~~d------~a~~YDvqT~~~l~t 1221 (1516)
T KOG1832|consen 1180 PRHSFDEDKAVKFSNSLQFRALGTEAD------DALLYDVQTCSPLQT 1221 (1516)
T ss_pred ccccccccceeehhhhHHHHHhccccc------ceEEEecccCcHHHH
Confidence 4567788887665555555422 689999987665544
No 302
>KOG2314|consensus
Probab=97.40 E-value=0.002 Score=49.03 Aligned_cols=112 Identities=11% Similarity=0.035 Sum_probs=76.8
Q ss_pred cEEEEEeCCCCccEEEEEecC-----------CeEEEEeCCCCCCCceEEecC---CCCCEEEEEEccCCCEEEEEeCCC
Q psy7062 14 QISTVFDSKHLVEMVAALGGY-----------QHIRMYDFGSNNPNPVINCEG---VSKNVVEVGFQEDGKWMFTGGEDC 79 (148)
Q Consensus 14 ~~~~~~~~~~~~~~l~~~~~d-----------~~v~~~d~~~~~~~~~~~~~~---~~~~i~~~~~sp~~~~l~~~~~~~ 79 (148)
..-+.|+|. ..+|++-+.. ..+.+||+.++ ...+.+.. .-....-+.||.|+++++--.. .
T Consensus 252 Vq~idfSP~--EkYLVT~s~~p~~~~~~d~e~~~l~IWDI~tG--~lkrsF~~~~~~~~~WP~frWS~DdKy~Arm~~-~ 326 (698)
T KOG2314|consen 252 VQFIDFSPN--EKYLVTYSPEPIIVEEDDNEGQQLIIWDIATG--LLKRSFPVIKSPYLKWPIFRWSHDDKYFARMTG-N 326 (698)
T ss_pred ceeeecCCc--cceEEEecCCccccCcccCCCceEEEEEcccc--chhcceeccCCCccccceEEeccCCceeEEecc-c
Confidence 445666676 7888885422 47999999999 66666654 2233456799999999987665 5
Q ss_pred cEEEEECCcc-------cc-ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcc
Q psy7062 80 RARIWDLSLC-------FI-QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAA 131 (148)
Q Consensus 80 ~i~l~d~~~~-------~~-~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~ 131 (148)
.|.+|+..+. +. ..|..+.|+|.++.|+-=...- -....++.+..+++.+.
T Consensus 327 sisIyEtpsf~lld~Kslki~gIr~FswsP~~~llAYwtpe~-~~~parvtL~evPs~~~ 385 (698)
T KOG2314|consen 327 SISIYETPSFMLLDKKSLKISGIRDFSWSPTSNLLAYWTPET-NNIPARVTLMEVPSKRE 385 (698)
T ss_pred eEEEEecCceeeecccccCCccccCcccCCCcceEEEEcccc-cCCcceEEEEecCccce
Confidence 7999999887 22 8899999999988887644311 01234555666554443
No 303
>KOG4640|consensus
Probab=97.39 E-value=0.0015 Score=50.33 Aligned_cols=72 Identities=18% Similarity=0.155 Sum_probs=58.6
Q ss_pred CCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----c--c-ccc-eEEEEccCCCEEEEEecCCceecCeeEEEeecCC
Q psy7062 57 SKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC----F--I-QQV-NALRITPDKQLLASAEELSCCYCGAAVFVYNSCY 128 (148)
Q Consensus 57 ~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~----~--~-~~i-~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~ 128 (148)
...+.-+.|+|.-..++.+..+|.+-++-++-. + . ..+ .+++|.|||+.|+.|-.|| +|++.|+.+
T Consensus 20 ~~~i~~~ewnP~~dLiA~~t~~gelli~R~n~qRlwtip~p~~~v~~sL~W~~DGkllaVg~kdG------~I~L~Dve~ 93 (665)
T KOG4640|consen 20 PINIKRIEWNPKMDLIATRTEKGELLIHRLNWQRLWTIPIPGENVTASLCWRPDGKLLAVGFKDG------TIRLHDVEK 93 (665)
T ss_pred ccceEEEEEcCccchhheeccCCcEEEEEeccceeEeccCCCCccceeeeecCCCCEEEEEecCC------eEEEEEccC
Confidence 566888999999999999999998776666533 2 2 334 4999999999999999998 999999998
Q ss_pred Ccceec
Q psy7062 129 PAAVVA 134 (148)
Q Consensus 129 ~~~~~~ 134 (148)
+...+.
T Consensus 94 ~~~l~~ 99 (665)
T KOG4640|consen 94 GGRLVS 99 (665)
T ss_pred CCceec
Confidence 776554
No 304
>KOG1645|consensus
Probab=97.35 E-value=0.002 Score=47.22 Aligned_cols=72 Identities=10% Similarity=0.144 Sum_probs=58.1
Q ss_pred cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCC-EEEEEeCCCcEEEEECCcc
Q psy7062 14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGK-WMFTGGEDCRARIWDLSLC 89 (148)
Q Consensus 14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~-~l~~~~~~~~i~l~d~~~~ 89 (148)
...++|+|.. ..++..++.+..|++.|+++. ..+.++..+ ..+.+++|+.|.. +++.|..+|.+.+||.+..
T Consensus 196 IrdlafSp~~-~GLl~~asl~nkiki~dlet~--~~vssy~a~-~~~wSC~wDlde~h~IYaGl~nG~VlvyD~R~~ 268 (463)
T KOG1645|consen 196 IRDLAFSPFN-EGLLGLASLGNKIKIMDLETS--CVVSSYIAY-NQIWSCCWDLDERHVIYAGLQNGMVLVYDMRQP 268 (463)
T ss_pred hhhhccCccc-cceeeeeccCceEEEEecccc--eeeeheecc-CCceeeeeccCCcceeEEeccCceEEEEEccCC
Confidence 3567777764 446777799999999999998 677777766 7788999998655 7788889999999999876
No 305
>KOG2314|consensus
Probab=97.28 E-value=0.0038 Score=47.66 Aligned_cols=92 Identities=17% Similarity=0.151 Sum_probs=69.0
Q ss_pred EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeC-----------CCcEEE
Q psy7062 15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGE-----------DCRARI 83 (148)
Q Consensus 15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~-----------~~~i~l 83 (148)
.-+.|+|. |.+|++ -...-|-+|-=++. ..+..+. | ..|..++|||..++|++=+. ...+++
T Consensus 214 tyv~wSP~--GTYL~t-~Hk~GI~lWGG~~f--~r~~RF~-H-p~Vq~idfSP~EkYLVT~s~~p~~~~~~d~e~~~l~I 286 (698)
T KOG2314|consen 214 TYVRWSPK--GTYLVT-FHKQGIALWGGESF--DRIQRFY-H-PGVQFIDFSPNEKYLVTYSPEPIIVEEDDNEGQQLII 286 (698)
T ss_pred eeEEecCC--ceEEEE-EeccceeeecCccH--HHHHhcc-C-CCceeeecCCccceEEEecCCccccCcccCCCceEEE
Confidence 45678888 999999 66677889977766 5666664 5 45788999999999998553 146999
Q ss_pred EECCcc-----cc-----ccce-EEEEccCCCEEEEEecCC
Q psy7062 84 WDLSLC-----FI-----QQVN-ALRITPDKQLLASAEELS 113 (148)
Q Consensus 84 ~d~~~~-----~~-----~~i~-~~~~sp~~~~l~~~~~d~ 113 (148)
||+.++ |. ..++ -+.||-|.++++.-..++
T Consensus 287 WDI~tG~lkrsF~~~~~~~~~WP~frWS~DdKy~Arm~~~s 327 (698)
T KOG2314|consen 287 WDIATGLLKRSFPVIKSPYLKWPIFRWSHDDKYFARMTGNS 327 (698)
T ss_pred EEccccchhcceeccCCCccccceEEeccCCceeEEeccce
Confidence 999998 22 2222 358999999998887644
No 306
>PRK02888 nitrous-oxide reductase; Validated
Probab=97.22 E-value=0.023 Score=44.50 Aligned_cols=94 Identities=15% Similarity=0.077 Sum_probs=69.5
Q ss_pred ccEEEEEecCCeEEEEeCCC----CCCCceEEecCCCCCEEEEEEccCCCEEEEEeC-CCcEEEEECCcc---c------
Q psy7062 25 VEMVAALGGYQHIRMYDFGS----NNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGE-DCRARIWDLSLC---F------ 90 (148)
Q Consensus 25 ~~~l~~~~~d~~v~~~d~~~----~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~-~~~i~l~d~~~~---~------ 90 (148)
|++... .++.|.+.|..+ . .+.+..+. -....-+++++|||++++.++. ++++.+.|+.+. |
T Consensus 288 GK~~~V--~gn~V~VID~~t~~~~~-~~v~~yIP-VGKsPHGV~vSPDGkylyVanklS~tVSVIDv~k~k~~~~~~~~~ 363 (635)
T PRK02888 288 GKFKTI--GGSKVPVVDGRKAANAG-SALTRYVP-VPKNPHGVNTSPDGKYFIANGKLSPTVTVIDVRKLDDLFDGKIKP 363 (635)
T ss_pred CCEEEE--CCCEEEEEECCccccCC-cceEEEEE-CCCCccceEECCCCCEEEEeCCCCCcEEEEEChhhhhhhhccCCc
Confidence 444444 257899999987 2 14555555 4566778999999998866554 789999999875 1
Q ss_pred --------c--ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCC
Q psy7062 91 --------I--QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCY 128 (148)
Q Consensus 91 --------~--~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~ 128 (148)
+ ......+|.++|....+..-|. +|..||+..
T Consensus 364 ~~~vvaevevGlGPLHTaFDg~G~aytslf~ds------qv~kwn~~~ 405 (635)
T PRK02888 364 RDAVVAEPELGLGPLHTAFDGRGNAYTTLFLDS------QIVKWNIEA 405 (635)
T ss_pred cceEEEeeccCCCcceEEECCCCCEEEeEeecc------eeEEEehHH
Confidence 1 5567789999988777777766 899999875
No 307
>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal
Probab=97.22 E-value=0.021 Score=40.16 Aligned_cols=63 Identities=13% Similarity=0.112 Sum_probs=47.6
Q ss_pred CccEEEEEecCCeEEEEeCCCCCCCceEEecC---CCCCEEEEEEccCCCEEEEEeCCCcEEEEECC
Q psy7062 24 LVEMVAALGGYQHIRMYDFGSNNPNPVINCEG---VSKNVVEVGFQEDGKWMFTGGEDCRARIWDLS 87 (148)
Q Consensus 24 ~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~---~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~ 87 (148)
+|++||. -.|..|.+-..+..-...+...+. .......++||||+..++.+...|+|++||+.
T Consensus 8 ~Gk~lAi-~qd~~iEiRsa~Ddf~si~~kcqVpkD~~PQWRkl~WSpD~tlLa~a~S~G~i~vfdl~ 73 (282)
T PF15492_consen 8 DGKLLAI-LQDQCIEIRSAKDDFSSIIGKCQVPKDPNPQWRKLAWSPDCTLLAYAESTGTIRVFDLM 73 (282)
T ss_pred CCcEEEE-EeccEEEEEeccCCchheeEEEecCCCCCchheEEEECCCCcEEEEEcCCCeEEEEecc
Confidence 3888888 788888887776543333444332 23456789999999999999999999999996
No 308
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=97.21 E-value=0.039 Score=39.58 Aligned_cols=54 Identities=15% Similarity=0.148 Sum_probs=37.2
Q ss_pred EEEeCCCCccEEEEEecC------CeEEEEeCC-CCCCCceEEecCCCCCEEEEEEccCCCEEEEE
Q psy7062 17 TVFDSKHLVEMVAALGGY------QHIRMYDFG-SNNPNPVINCEGVSKNVVEVGFQEDGKWMFTG 75 (148)
Q Consensus 17 ~~~~~~~~~~~l~~~~~d------~~v~~~d~~-~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~ 75 (148)
.+|+++ |++|++ ++. |.|-+||.. +. +.+..+..|.-..=.+.+.|||+.|+.+
T Consensus 56 g~fs~d--G~~Lyt-TEnd~~~g~G~IgVyd~~~~~--~ri~E~~s~GIGPHel~l~pDG~tLvVA 116 (305)
T PF07433_consen 56 GVFSPD--GRLLYT-TENDYETGRGVIGVYDAARGY--RRIGEFPSHGIGPHELLLMPDGETLVVA 116 (305)
T ss_pred EEEcCC--CCEEEE-eccccCCCcEEEEEEECcCCc--EEEeEecCCCcChhhEEEcCCCCEEEEE
Confidence 356677 788888 433 479999999 44 6677777666555566677777666554
No 309
>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length. This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.
Probab=97.15 E-value=0.012 Score=46.14 Aligned_cols=95 Identities=9% Similarity=0.163 Sum_probs=68.2
Q ss_pred CccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEc--cCCCEEEEEeCCCcEEEEECCcc------------
Q psy7062 24 LVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQ--EDGKWMFTGGEDCRARIWDLSLC------------ 89 (148)
Q Consensus 24 ~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~s--p~~~~l~~~~~~~~i~l~d~~~~------------ 89 (148)
.++..++-+....+.+||.+.+..+....+ .....|..++|. |+++.+++.+..+.|.++--...
T Consensus 40 ~~k~a~V~~~~~~LtIWD~~~~~lE~~~~f-~~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~Q~R~dy~~~~p~w~~i 118 (631)
T PF12234_consen 40 IKKIAVVDSSRSELTIWDTRSGVLEYEESF-SEDDPIRDLDWTSTPDGQSILAVGFPHHVLLYTQLRYDYTNKGPSWAPI 118 (631)
T ss_pred cCcEEEEECCCCEEEEEEcCCcEEEEeeee-cCCCceeeceeeecCCCCEEEEEEcCcEEEEEEccchhhhcCCccccee
Confidence 356656644455899999998722222233 347789999995 68999999999999998865322
Q ss_pred -------cc-ccceEEEEccCCCEEEEEecCCceecCeeEEEeecC
Q psy7062 90 -------FI-QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSC 127 (148)
Q Consensus 90 -------~~-~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~ 127 (148)
++ .+|....|.++|..++.++. ++.++|-.
T Consensus 119 ~~i~i~~~T~h~Igds~Wl~~G~LvV~sGN--------qlfv~dk~ 156 (631)
T PF12234_consen 119 RKIDISSHTPHPIGDSIWLKDGTLVVGSGN--------QLFVFDKW 156 (631)
T ss_pred EEEEeecCCCCCccceeEecCCeEEEEeCC--------EEEEECCC
Confidence 11 78889999999998777655 68887743
No 310
>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=97.14 E-value=0.0023 Score=45.68 Aligned_cols=103 Identities=13% Similarity=0.299 Sum_probs=71.0
Q ss_pred EeCCCCccEEEEEecCCeEEEEeCCCCCCC----------------------------------------ceEEe-cCCC
Q psy7062 19 FDSKHLVEMVAALGGYQHIRMYDFGSNNPN----------------------------------------PVINC-EGVS 57 (148)
Q Consensus 19 ~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~----------------------------------------~~~~~-~~~~ 57 (148)
+++.....+|++ +.|.++++|.+..++.+ +.+.. ..|+
T Consensus 94 ~~~t~r~hFLls-tNdktiKlWKiyeknlk~va~nnls~~~~~~~~g~~~s~~~l~lprls~hd~iiaa~p~rvyaNaH~ 172 (460)
T COG5170 94 FDDTGRNHFLLS-TNDKTIKLWKIYEKNLKVVAENNLSDSFHSPMGGPLTSTKELLLPRLSEHDEIIAAKPCRVYANAHP 172 (460)
T ss_pred ecCCCcceEEEe-cCCceeeeeeeecccchhhhccccccccccccCCCcCCHHHhhcccccccceEEEeccceeccccce
Confidence 345555667777 89999999998654200 01111 3467
Q ss_pred CCEEEEEEccCCCEEEEEeCCCcEEEEECCcc---cc-------------ccceEEEEccC-CCEEEEEecCCceecCee
Q psy7062 58 KNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC---FI-------------QQVNALRITPD-KQLLASAEELSCCYCGAA 120 (148)
Q Consensus 58 ~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~---~~-------------~~i~~~~~sp~-~~~l~~~~~d~~~~~~~~ 120 (148)
..+.+++++.|...+++++ |=.|.+|++... |. .-|.+..|+|. ...+...+..| .
T Consensus 173 yhiNSiS~NsD~et~lSaD-dLrINLWnl~i~D~sFnIVDiKP~nmeeLteVItSaeFhp~~cn~fmYSsSkG------~ 245 (460)
T COG5170 173 YHINSISFNSDKETLLSAD-DLRINLWNLEIIDGSFNIVDIKPHNMEELTEVITSAEFHPEMCNVFMYSSSKG------E 245 (460)
T ss_pred eEeeeeeecCchheeeecc-ceeeeeccccccCCceEEEeccCccHHHHHHHHhhcccCHhHcceEEEecCCC------c
Confidence 7889999999999888875 557889988654 11 55788899994 45555666545 8
Q ss_pred EEEeecCCC
Q psy7062 121 VFVYNSCYP 129 (148)
Q Consensus 121 i~~~d~~~~ 129 (148)
|++-|++..
T Consensus 246 Ikl~DlRq~ 254 (460)
T COG5170 246 IKLNDLRQS 254 (460)
T ss_pred EEehhhhhh
Confidence 999998843
No 311
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=97.11 E-value=0.015 Score=43.87 Aligned_cols=89 Identities=15% Similarity=0.216 Sum_probs=60.1
Q ss_pred eEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEE-EEeCCC--cEEEEECCcc----cc---ccceEEEEccCCCE
Q psy7062 36 HIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMF-TGGEDC--RARIWDLSLC----FI---QQVNALRITPDKQL 105 (148)
Q Consensus 36 ~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~-~~~~~~--~i~l~d~~~~----~~---~~i~~~~~sp~~~~ 105 (148)
.+.++|++++....+..+.++.. .-+|+|||+.++ +...|+ .|.+.|+... +. +.-..=.|+|||++
T Consensus 219 ~i~~~~l~~g~~~~i~~~~g~~~---~P~fspDG~~l~f~~~rdg~~~iy~~dl~~~~~~~Lt~~~gi~~~Ps~spdG~~ 295 (425)
T COG0823 219 RIYYLDLNTGKRPVILNFNGNNG---APAFSPDGSKLAFSSSRDGSPDIYLMDLDGKNLPRLTNGFGINTSPSWSPDGSK 295 (425)
T ss_pred eEEEEeccCCccceeeccCCccC---CccCCCCCCEEEEEECCCCCccEEEEcCCCCcceecccCCccccCccCCCCCCE
Confidence 58888999885455555554433 458999999764 455565 4667788766 33 33335679999998
Q ss_pred EEEEecCCceecCeeEEEeecCCCc
Q psy7062 106 LASAEELSCCYCGAAVFVYNSCYPA 130 (148)
Q Consensus 106 l~~~~~d~~~~~~~~i~~~d~~~~~ 130 (148)
++-.+..+ +...|.++|....+
T Consensus 296 ivf~Sdr~---G~p~I~~~~~~g~~ 317 (425)
T COG0823 296 IVFTSDRG---GRPQIYLYDLEGSQ 317 (425)
T ss_pred EEEEeCCC---CCcceEEECCCCCc
Confidence 88887544 34578888877544
No 312
>KOG3617|consensus
Probab=97.00 E-value=0.0018 Score=51.79 Aligned_cols=101 Identities=8% Similarity=0.107 Sum_probs=73.8
Q ss_pred EEEEEeCCCCccEEEEEe----cCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-
Q psy7062 15 ISTVFDSKHLVEMVAALG----GYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC- 89 (148)
Q Consensus 15 ~~~~~~~~~~~~~l~~~~----~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~- 89 (148)
....|+|. ..++++++ ..|+|-+| .+++ ++.+... .+-.+++++|+|..-.++.|=.-|.+.+|..++.
T Consensus 19 ti~SWHPs--ePlfAVA~fS~er~GSVtIf-adtG--EPqr~Vt-~P~hatSLCWHpe~~vLa~gwe~g~~~v~~~~~~e 92 (1416)
T KOG3617|consen 19 TISSWHPS--EPLFAVASFSPERGGSVTIF-ADTG--EPQRDVT-YPVHATSLCWHPEEFVLAQGWEMGVSDVQKTNTTE 92 (1416)
T ss_pred cccccCCC--CceeEEEEecCCCCceEEEE-ecCC--CCCcccc-cceehhhhccChHHHHHhhccccceeEEEecCCce
Confidence 45566666 56777665 34577775 3444 4444332 3445678999998888888877899999999876
Q ss_pred -----cc--ccceEEEEccCCCEEEEEecCCceecCeeEEEeecC
Q psy7062 90 -----FI--QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSC 127 (148)
Q Consensus 90 -----~~--~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~ 127 (148)
.. .++..+.|||+|..++++..-| .+.+|.+.
T Consensus 93 ~htv~~th~a~i~~l~wS~~G~~l~t~d~~g------~v~lwr~d 131 (1416)
T KOG3617|consen 93 THTVVETHPAPIQGLDWSHDGTVLMTLDNPG------SVHLWRYD 131 (1416)
T ss_pred eeeeccCCCCCceeEEecCCCCeEEEcCCCc------eeEEEEee
Confidence 12 8899999999999999998755 78888765
No 313
>KOG0882|consensus
Probab=96.99 E-value=0.013 Score=43.78 Aligned_cols=99 Identities=10% Similarity=-0.035 Sum_probs=78.4
Q ss_pred ecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc--------------------cc
Q psy7062 32 GGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC--------------------FI 91 (148)
Q Consensus 32 ~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~--------------------~~ 91 (148)
-.++.+.++|-....-+....-..|.++|..+.+++.+..+++....|.|.-|..... +.
T Consensus 119 ~~sg~i~VvD~~~d~~q~~~fkklH~sPV~~i~y~qa~Ds~vSiD~~gmVEyWs~e~~~qfPr~~l~~~~K~eTdLy~f~ 198 (558)
T KOG0882|consen 119 FKSGKIFVVDGFGDFCQDGYFKKLHFSPVKKIRYNQAGDSAVSIDISGMVEYWSAEGPFQFPRTNLNFELKHETDLYGFP 198 (558)
T ss_pred ccCCCcEEECCcCCcCccceecccccCceEEEEeeccccceeeccccceeEeecCCCcccCccccccccccccchhhccc
Confidence 3556799998876522334444569999999999999999999999999999998731 11
Q ss_pred ---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceeccC
Q psy7062 92 ---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVASN 136 (148)
Q Consensus 92 ---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~~ 136 (148)
....++.|+|++..+.+-+.|. +|++++..+...++.++
T Consensus 199 K~Kt~pts~Efsp~g~qistl~~Dr------kVR~F~~KtGklvqeiD 240 (558)
T KOG0882|consen 199 KAKTEPTSFEFSPDGAQISTLNPDR------KVRGFVFKTGKLVQEID 240 (558)
T ss_pred ccccCccceEEccccCcccccCccc------EEEEEEeccchhhhhhh
Confidence 6788999999999999999888 89999988776655443
No 314
>smart00320 WD40 WD40 repeats. Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.
Probab=96.93 E-value=0.0024 Score=29.41 Aligned_cols=28 Identities=25% Similarity=0.465 Sum_probs=24.7
Q ss_pred ccceEEEEccCCCEEEEEecCCceecCeeEEEee
Q psy7062 92 QQVNALRITPDKQLLASAEELSCCYCGAAVFVYN 125 (148)
Q Consensus 92 ~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d 125 (148)
..+.++.|+++++.+++++.|+ .+++||
T Consensus 13 ~~i~~~~~~~~~~~~~~~~~d~------~~~~~~ 40 (40)
T smart00320 13 GPVTSVAFSPDGKYLASASDDG------TIKLWD 40 (40)
T ss_pred CceeEEEECCCCCEEEEecCCC------eEEEcC
Confidence 4688999999989999999988 899986
No 315
>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain
Probab=96.92 E-value=0.0061 Score=31.16 Aligned_cols=31 Identities=16% Similarity=0.217 Sum_probs=27.4
Q ss_pred CCCEEEEEEccCCCEEEEEeCCCcEEEEECC
Q psy7062 57 SKNVVEVGFQEDGKWMFTGGEDCRARIWDLS 87 (148)
Q Consensus 57 ~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~ 87 (148)
...|..++|||....++.++.+|.+.++.++
T Consensus 11 ~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl~ 41 (47)
T PF12894_consen 11 PSRVSCMSWCPTMDLIALGTEDGEVLVYRLN 41 (47)
T ss_pred CCcEEEEEECCCCCEEEEEECCCeEEEEECC
Confidence 4568899999999999999999999999873
No 316
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=96.90 E-value=0.055 Score=44.77 Aligned_cols=106 Identities=14% Similarity=0.109 Sum_probs=73.2
Q ss_pred cEEEEEeCCCCccEEEEEecCC--eEEEEeCCCCC-CCceEEec-----CCCCCEEEEEEccCCCEEEEEeCCCcEEEE-
Q psy7062 14 QISTVFDSKHLVEMVAALGGYQ--HIRMYDFGSNN-PNPVINCE-----GVSKNVVEVGFQEDGKWMFTGGEDCRARIW- 84 (148)
Q Consensus 14 ~~~~~~~~~~~~~~l~~~~~d~--~v~~~d~~~~~-~~~~~~~~-----~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~- 84 (148)
....+|+...+..+++.+.... .+.+-...... .+.+..+. .....|.++.+.++...++.+..+|.|.+.
T Consensus 24 ~~~~~~d~~sd~i~~~~~~~~~~~~i~~~~~~~~~~~~~l~s~~~~~~~~~~~~ivs~~yl~d~~~l~~~~~~Gdi~~~~ 103 (928)
T PF04762_consen 24 ITATAFDSDSDSIYFVLGPNEIDYVIELDRFSQDGSVEVLASWDAPLPDDPNDKIVSFQYLADSESLCIALASGDIILVR 103 (928)
T ss_pred cceEEEecCCCeEEEEECCCCcceEEEEEeeccCCceeEEEeccccCCcCCCCcEEEEEeccCCCcEEEEECCceEEEEE
Confidence 4667888877666667654444 23443332220 12233332 234679999999999999999999999998
Q ss_pred ---ECCcc-------ccccceEEEEccCCCEEEEEecCCceecCeeEEEee
Q psy7062 85 ---DLSLC-------FIQQVNALRITPDKQLLASAEELSCCYCGAAVFVYN 125 (148)
Q Consensus 85 ---d~~~~-------~~~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d 125 (148)
|.... +...|.+++||||+..|+.++.++ ++.+.+
T Consensus 104 ~~~~~~~~~~E~VG~vd~GI~a~~WSPD~Ella~vT~~~------~l~~mt 148 (928)
T PF04762_consen 104 EDPDPDEDEIEIVGSVDSGILAASWSPDEELLALVTGEG------NLLLMT 148 (928)
T ss_pred ccCCCCCceeEEEEEEcCcEEEEEECCCcCEEEEEeCCC------EEEEEe
Confidence 55554 228899999999999999998877 565554
No 317
>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
Probab=96.73 E-value=0.01 Score=44.80 Aligned_cols=98 Identities=12% Similarity=0.166 Sum_probs=72.0
Q ss_pred EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCC---------------
Q psy7062 15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDC--------------- 79 (148)
Q Consensus 15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~--------------- 79 (148)
....|+|. |.+|++ ..-..|.+|+-... ..+.++. ...|..+.|+|++++|.+=+..+
T Consensus 36 ~~~~~SP~--G~~l~~-~~~~~V~~~~g~~~--~~l~~~~--~~~V~~~~fSP~~kYL~tw~~~pi~~pe~e~sp~~~~n 108 (561)
T COG5354 36 AYVSESPL--GTYLFS-EHAAGVECWGGPSK--AKLVRFR--HPDVKYLDFSPNEKYLVTWSREPIIEPEIEISPFTSKN 108 (561)
T ss_pred hheeecCc--chheeh-hhccceEEccccch--hheeeee--cCCceecccCcccceeeeeccCCccChhhccCCccccC
Confidence 34566777 889888 66678999999988 5666665 55688999999999998855433
Q ss_pred cEEEEECCcc-----cc---cc--ce-EEEEccCCCEEEEEecCCceecCeeEEEeec
Q psy7062 80 RARIWDLSLC-----FI---QQ--VN-ALRITPDKQLLASAEELSCCYCGAAVFVYNS 126 (148)
Q Consensus 80 ~i~l~d~~~~-----~~---~~--i~-~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~ 126 (148)
.+.+||+.++ |. .+ .+ -+.|+-+..+++-...+ .++++++
T Consensus 109 ~~~vwd~~sg~iv~sf~~~~q~~~~Wp~~k~s~~D~y~ARvv~~-------sl~i~e~ 159 (561)
T COG5354 109 NVFVWDIASGMIVFSFNGISQPYLGWPVLKFSIDDKYVARVVGS-------SLYIHEI 159 (561)
T ss_pred ceeEEeccCceeEeeccccCCcccccceeeeeecchhhhhhccC-------eEEEEec
Confidence 4999999988 22 33 55 67888887776655432 4788885
No 318
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=96.65 E-value=0.078 Score=38.10 Aligned_cols=93 Identities=16% Similarity=0.142 Sum_probs=62.3
Q ss_pred EEEEeCCCCccEEEEEecCC-eEEEEeCCCCCCCceEEecCCCCC--EEEEEEccCCCEEEEEeC-----CCcEEEEECC
Q psy7062 16 STVFDSKHLVEMVAALGGYQ-HIRMYDFGSNNPNPVINCEGVSKN--VVEVGFQEDGKWMFTGGE-----DCRARIWDLS 87 (148)
Q Consensus 16 ~~~~~~~~~~~~l~~~~~d~-~v~~~d~~~~~~~~~~~~~~~~~~--i~~~~~sp~~~~l~~~~~-----~~~i~l~d~~ 87 (148)
.++.+|.. ...++.+-.-| ...+||..++ +....+.....+ .-.-.||+||++|++.-. .|.|-+||..
T Consensus 9 ~~a~~p~~-~~avafaRRPG~~~~v~D~~~g--~~~~~~~a~~gRHFyGHg~fs~dG~~LytTEnd~~~g~G~IgVyd~~ 85 (305)
T PF07433_consen 9 GVAAHPTR-PEAVAFARRPGTFALVFDCRTG--QLLQRLWAPPGRHFYGHGVFSPDGRLLYTTENDYETGRGVIGVYDAA 85 (305)
T ss_pred ceeeCCCC-CeEEEEEeCCCcEEEEEEcCCC--ceeeEEcCCCCCEEecCEEEcCCCCEEEEeccccCCCcEEEEEEECc
Confidence 34445532 45555555544 4777899888 555555433322 223578999999988644 3789999999
Q ss_pred cc------cc---ccceEEEEccCCCEEEEEec
Q psy7062 88 LC------FI---QQVNALRITPDKQLLASAEE 111 (148)
Q Consensus 88 ~~------~~---~~i~~~~~sp~~~~l~~~~~ 111 (148)
.. |. -....+.+.||++.|+.+..
T Consensus 86 ~~~~ri~E~~s~GIGPHel~l~pDG~tLvVANG 118 (305)
T PF07433_consen 86 RGYRRIGEFPSHGIGPHELLLMPDGETLVVANG 118 (305)
T ss_pred CCcEEEeEecCCCcChhhEEEcCCCCEEEEEcC
Confidence 54 33 55678899999988888753
No 319
>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins. Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].
Probab=96.64 E-value=0.056 Score=43.69 Aligned_cols=90 Identities=12% Similarity=0.111 Sum_probs=60.7
Q ss_pred EEEecCCeEEEEeCCCCCCCceE-Eec--CCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----cc---ccceEE
Q psy7062 29 AALGGYQHIRMYDFGSNNPNPVI-NCE--GVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-----FI---QQVNAL 97 (148)
Q Consensus 29 ~~~~~d~~v~~~d~~~~~~~~~~-~~~--~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-----~~---~~i~~~ 97 (148)
..|-++..+..||.+-...+.+. ... .......+++-..+| +++.|+.+|.|||||-... |. .+|.++
T Consensus 546 flGls~n~lfriDpR~~~~k~v~~~~k~Y~~~~~Fs~~aTt~~G-~iavgs~~G~IRLyd~~g~~AKT~lp~lG~pI~~i 624 (794)
T PF08553_consen 546 FLGLSDNSLFRIDPRLSGNKLVDSQSKQYSSKNNFSCFATTEDG-YIAVGSNKGDIRLYDRLGKRAKTALPGLGDPIIGI 624 (794)
T ss_pred EEEECCCceEEeccCCCCCceeeccccccccCCCceEEEecCCc-eEEEEeCCCcEEeecccchhhhhcCCCCCCCeeEE
Confidence 34466788999999875222221 111 123445666555544 5888999999999995322 43 899999
Q ss_pred EEccCCCEEEEEecCCceecCeeEEEeec
Q psy7062 98 RITPDKQLLASAEELSCCYCGAAVFVYNS 126 (148)
Q Consensus 98 ~~sp~~~~l~~~~~d~~~~~~~~i~~~d~ 126 (148)
..+.||++++.++.. .+.+++.
T Consensus 625 Dvt~DGkwilaTc~t-------yLlLi~t 646 (794)
T PF08553_consen 625 DVTADGKWILATCKT-------YLLLIDT 646 (794)
T ss_pred EecCCCcEEEEeecc-------eEEEEEE
Confidence 999999999888752 3666664
No 320
>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins. Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].
Probab=96.60 E-value=0.012 Score=47.37 Aligned_cols=59 Identities=19% Similarity=0.332 Sum_probs=45.2
Q ss_pred ccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEEC
Q psy7062 25 VEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDL 86 (148)
Q Consensus 25 ~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~ 86 (148)
...+|+|+.+|.||+||--.. +....+.+-...|.+|+++.||+|++..+... +.|++.
T Consensus 588 ~G~iavgs~~G~IRLyd~~g~--~AKT~lp~lG~pI~~iDvt~DGkwilaTc~ty-LlLi~t 646 (794)
T PF08553_consen 588 DGYIAVGSNKGDIRLYDRLGK--RAKTALPGLGDPIIGIDVTADGKWILATCKTY-LLLIDT 646 (794)
T ss_pred CceEEEEeCCCcEEeecccch--hhhhcCCCCCCCeeEEEecCCCcEEEEeecce-EEEEEE
Confidence 456788899999999995443 55566777789999999999999988776553 444443
No 321
>KOG1920|consensus
Probab=96.60 E-value=0.034 Score=46.18 Aligned_cols=106 Identities=17% Similarity=0.156 Sum_probs=67.4
Q ss_pred EEEEEeCCCCccEEEE-----EecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEe---CCCcEEEEEC
Q psy7062 15 ISTVFDSKHLVEMVAA-----LGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGG---EDCRARIWDL 86 (148)
Q Consensus 15 ~~~~~~~~~~~~~l~~-----~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~---~~~~i~l~d~ 86 (148)
..+.|- ++|+++|+ ....+.+++||-+ + ..-.+-......-.+++|-|.|.++++-- .++.|.+|.-
T Consensus 199 ~~IsWR--gDg~~fAVs~~~~~~~~RkirV~drE-g--~Lns~se~~~~l~~~LsWkPsgs~iA~iq~~~sd~~IvffEr 273 (1265)
T KOG1920|consen 199 TSISWR--GDGEYFAVSFVESETGTRKIRVYDRE-G--ALNSTSEPVEGLQHSLSWKPSGSLIAAIQCKTSDSDIVFFER 273 (1265)
T ss_pred ceEEEc--cCCcEEEEEEEeccCCceeEEEeccc-c--hhhcccCcccccccceeecCCCCeEeeeeecCCCCcEEEEec
Confidence 334444 44999988 3333689999998 3 11111111122335789999999887743 3457888876
Q ss_pred Ccc----c----c---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCC
Q psy7062 87 SLC----F----I---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCY 128 (148)
Q Consensus 87 ~~~----~----~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~ 128 (148)
+.. | . ..+..++|+.++..|++..... ....|++|-..+
T Consensus 274 NGL~hg~f~l~~p~de~~ve~L~Wns~sdiLAv~~~~~---e~~~v~lwt~~N 323 (1265)
T KOG1920|consen 274 NGLRHGEFVLPFPLDEKEVEELAWNSNSDILAVVTSNL---ENSLVQLWTTGN 323 (1265)
T ss_pred CCccccccccCCcccccchheeeecCCCCceeeeeccc---ccceEEEEEecC
Confidence 543 2 1 4489999999999988844332 233588887553
No 322
>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region
Probab=96.55 E-value=0.076 Score=32.31 Aligned_cols=87 Identities=13% Similarity=0.023 Sum_probs=58.5
Q ss_pred eCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc---cc--ccc
Q psy7062 20 DSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC---FI--QQV 94 (148)
Q Consensus 20 ~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~---~~--~~i 94 (148)
+-+...+ |++|++|..|++|+-+ +.+..+. .+..|+.+.-... ..++.+..+|+|-+|+-... .+ ..+
T Consensus 11 d~dg~~e-LlvGs~D~~IRvf~~~----e~~~Ei~-e~~~v~~L~~~~~-~~F~Y~l~NGTVGvY~~~~RlWRiKSK~~~ 83 (111)
T PF14783_consen 11 DGDGENE-LLVGSDDFEIRVFKGD----EIVAEIT-ETDKVTSLCSLGG-GRFAYALANGTVGVYDRSQRLWRIKSKNQV 83 (111)
T ss_pred CCCCcce-EEEecCCcEEEEEeCC----cEEEEEe-cccceEEEEEcCC-CEEEEEecCCEEEEEeCcceeeeeccCCCe
Confidence 3444344 5555999999999876 4577776 4667777766665 55778888888888877665 22 556
Q ss_pred eEEEEcc-C--C-CEEEEEecCC
Q psy7062 95 NALRITP-D--K-QLLASAEELS 113 (148)
Q Consensus 95 ~~~~~sp-~--~-~~l~~~~~d~ 113 (148)
.++.+.. + | ..|++|=.+|
T Consensus 84 ~~~~~~D~~gdG~~eLI~GwsnG 106 (111)
T PF14783_consen 84 TSMAFYDINGDGVPELIVGWSNG 106 (111)
T ss_pred EEEEEEcCCCCCceEEEEEecCC
Confidence 6665543 3 3 3677777666
No 323
>KOG2066|consensus
Probab=96.55 E-value=0.017 Score=45.94 Aligned_cols=79 Identities=15% Similarity=0.166 Sum_probs=61.3
Q ss_pred ccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-------ccccceEE
Q psy7062 25 VEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-------FIQQVNAL 97 (148)
Q Consensus 25 ~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-------~~~~i~~~ 97 (148)
...|+-|+.+|.+.+++.... + .+...|... .-+|.++++|+.||++.+..+-+. |..++.++
T Consensus 49 ~~~~~~GtH~g~v~~~~~~~~---~-~~~~~~s~~------~~~Gey~asCS~DGkv~I~sl~~~~~~~~~df~rpiksi 118 (846)
T KOG2066|consen 49 DKFFALGTHRGAVYLTTCQGN---P-KTNFDHSSS------ILEGEYVASCSDDGKVVIGSLFTDDEITQYDFKRPIKSI 118 (846)
T ss_pred cceeeeccccceEEEEecCCc---c-ccccccccc------ccCCceEEEecCCCcEEEeeccCCccceeEecCCcceeE
Confidence 567888889999999998754 3 444445444 668999999999999999888766 44889999
Q ss_pred EEccC-----CCEEEEEecCC
Q psy7062 98 RITPD-----KQLLASAEELS 113 (148)
Q Consensus 98 ~~sp~-----~~~l~~~~~d~ 113 (148)
+++|+ .+.+++|+..|
T Consensus 119 al~Pd~~~~~sk~fv~GG~ag 139 (846)
T KOG2066|consen 119 ALHPDFSRQQSKQFVSGGMAG 139 (846)
T ss_pred EeccchhhhhhhheeecCcce
Confidence 99997 45778877644
No 324
>KOG3617|consensus
Probab=96.52 E-value=0.0039 Score=50.03 Aligned_cols=69 Identities=10% Similarity=0.108 Sum_probs=58.1
Q ss_pred EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECC
Q psy7062 15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLS 87 (148)
Q Consensus 15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~ 87 (148)
..++|+|. .-+|+.|=+.+.+.+|...+. +.-.....|+..|..+.||++|..++++..-|.+.+|...
T Consensus 63 tSLCWHpe--~~vLa~gwe~g~~~v~~~~~~--e~htv~~th~a~i~~l~wS~~G~~l~t~d~~g~v~lwr~d 131 (1416)
T KOG3617|consen 63 TSLCWHPE--EFVLAQGWEMGVSDVQKTNTT--ETHTVVETHPAPIQGLDWSHDGTVLMTLDNPGSVHLWRYD 131 (1416)
T ss_pred hhhccChH--HHHHhhccccceeEEEecCCc--eeeeeccCCCCCceeEEecCCCCeEEEcCCCceeEEEEee
Confidence 35677776 667888777889999999887 5555566799999999999999999999999999999775
No 325
>KOG2114|consensus
Probab=96.51 E-value=0.057 Score=43.44 Aligned_cols=100 Identities=15% Similarity=0.211 Sum_probs=71.4
Q ss_pred EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCC-EEEEEEccCCCEEEEEeCCC-----cEEEEECCc
Q psy7062 15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKN-VVEVGFQEDGKWMFTGGEDC-----RARIWDLSL 88 (148)
Q Consensus 15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~-i~~~~~sp~~~~l~~~~~~~-----~i~l~d~~~ 88 (148)
...+|++. +..+|.|+.+|.|.+.+-.- +.+..++.+... +..+-.-.+.+++++.+.|. .+++||+..
T Consensus 27 ~isc~~s~--~~~vvigt~~G~V~~Ln~s~---~~~~~fqa~~~siv~~L~~~~~~~~L~sv~Ed~~~np~llkiw~lek 101 (933)
T KOG2114|consen 27 AISCCSSS--TGSVVIGTADGRVVILNSSF---QLIRGFQAYEQSIVQFLYILNKQNFLFSVGEDEQGNPVLLKIWDLEK 101 (933)
T ss_pred ceeEEcCC--CceEEEeeccccEEEecccc---eeeehheecchhhhhHhhcccCceEEEEEeecCCCCceEEEEecccc
Confidence 44555665 88889989999988877654 355778887777 44444444446888877764 489999954
Q ss_pred c--------c------c-------ccceEEEEccCCCEEEEEecCCceecCeeEEEee
Q psy7062 89 C--------F------I-------QQVNALRITPDKQLLASAEELSCCYCGAAVFVYN 125 (148)
Q Consensus 89 ~--------~------~-------~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d 125 (148)
. + . .++.+++.+.+-+.+++|..+| .|..+.
T Consensus 102 ~~~n~sP~c~~~~ri~~~~np~~~~p~s~l~Vs~~l~~Iv~Gf~nG------~V~~~~ 153 (933)
T KOG2114|consen 102 VDKNNSPQCLYEHRIFTIKNPTNPSPASSLAVSEDLKTIVCGFTNG------LVICYK 153 (933)
T ss_pred cCCCCCcceeeeeeeeccCCCCCCCcceEEEEEccccEEEEEecCc------EEEEEc
Confidence 3 1 1 6778889999989999999988 555553
No 326
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=96.46 E-value=0.16 Score=35.08 Aligned_cols=105 Identities=13% Similarity=0.078 Sum_probs=66.2
Q ss_pred EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEc-cCCCEEEEEeCCCcEEEEECCcc----
Q psy7062 15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQ-EDGKWMFTGGEDCRARIWDLSLC---- 89 (148)
Q Consensus 15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~s-p~~~~l~~~~~~~~i~l~d~~~~---- 89 (148)
++.+|++.. +.++++-...+.|..|+..++ . ...+.... ..++.+. +++++++ +...+ +.++|..++
T Consensus 3 Egp~~d~~~-g~l~~~D~~~~~i~~~~~~~~--~-~~~~~~~~--~~G~~~~~~~g~l~v-~~~~~-~~~~d~~~g~~~~ 74 (246)
T PF08450_consen 3 EGPVWDPRD-GRLYWVDIPGGRIYRVDPDTG--E-VEVIDLPG--PNGMAFDRPDGRLYV-ADSGG-IAVVDPDTGKVTV 74 (246)
T ss_dssp EEEEEETTT-TEEEEEETTTTEEEEEETTTT--E-EEEEESSS--EEEEEEECTTSEEEE-EETTC-EEEEETTTTEEEE
T ss_pred cceEEECCC-CEEEEEEcCCCEEEEEECCCC--e-EEEEecCC--CceEEEEccCCEEEE-EEcCc-eEEEecCCCcEEE
Confidence 678899842 778888567889999999887 3 33333222 7788888 5655544 44444 455598776
Q ss_pred ---c-----c-ccceEEEEccCCCEEEEEecCCceecC--eeEEEeecC
Q psy7062 90 ---F-----I-QQVNALRITPDKQLLASAEELSCCYCG--AAVFVYNSC 127 (148)
Q Consensus 90 ---~-----~-~~i~~~~~sp~~~~l~~~~~d~~~~~~--~~i~~~d~~ 127 (148)
. . ...+.+++.|+|+..++.......... +.|..++..
T Consensus 75 ~~~~~~~~~~~~~~ND~~vd~~G~ly~t~~~~~~~~~~~~g~v~~~~~~ 123 (246)
T PF08450_consen 75 LADLPDGGVPFNRPNDVAVDPDGNLYVTDSGGGGASGIDPGSVYRIDPD 123 (246)
T ss_dssp EEEEETTCSCTEEEEEEEE-TTS-EEEEEECCBCTTCGGSEEEEEEETT
T ss_pred EeeccCCCcccCCCceEEEcCCCCEEEEecCCCccccccccceEEECCC
Confidence 1 1 567889999999977776543321111 457777766
No 327
>KOG1008|consensus
Probab=96.46 E-value=0.0013 Score=50.94 Aligned_cols=107 Identities=21% Similarity=0.269 Sum_probs=74.9
Q ss_pred eecCcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEcc-CCCEEEEEeCCCcEEEEE-CC
Q psy7062 10 TAFGQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQE-DGKWMFTGGEDCRARIWD-LS 87 (148)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp-~~~~l~~~~~~~~i~l~d-~~ 87 (148)
+..++..++|..+ ..++.+|.....++++|++.. ......-.+..+.++.+.| .+.++++-. |+.+-+|| .+
T Consensus 153 ~l~gqns~cwlrd--~klvlaGm~sr~~~ifdlRqs---~~~~~svnTk~vqG~tVdp~~~nY~cs~~-dg~iAiwD~~r 226 (783)
T KOG1008|consen 153 TLDGQNSVCWLRD--TKLVLAGMTSRSVHIFDLRQS---LDSVSSVNTKYVQGITVDPFSPNYFCSNS-DGDIAIWDTYR 226 (783)
T ss_pred cccCccccccccC--cchhhcccccchhhhhhhhhh---hhhhhhhhhhhcccceecCCCCCceeccc-cCceeeccchh
Confidence 4456677888744 678888777779999999854 1222222356678888999 888887766 99999999 33
Q ss_pred cc---cc----------ccceEEEEccCCC-EEEEEecCCceecCeeEEEeecC
Q psy7062 88 LC---FI----------QQVNALRITPDKQ-LLASAEELSCCYCGAAVFVYNSC 127 (148)
Q Consensus 88 ~~---~~----------~~i~~~~~sp~~~-~l~~~~~d~~~~~~~~i~~~d~~ 127 (148)
+. |. .+...++|.|... .+++..+| ..+|+++|++
T Consensus 227 nienpl~~i~~~~N~~~~~l~~~aycPtrtglla~l~Rd-----S~tIrlydi~ 275 (783)
T KOG1008|consen 227 NIENPLQIILRNENKKPKQLFALAYCPTRTGLLAVLSRD-----SITIRLYDIC 275 (783)
T ss_pred hhccHHHHHhhCCCCcccceeeEEeccCCcchhhhhccC-----cceEEEeccc
Confidence 33 21 4588999999544 55555553 4479999976
No 328
>PRK02888 nitrous-oxide reductase; Validated
Probab=96.41 E-value=0.1 Score=41.04 Aligned_cols=88 Identities=14% Similarity=0.125 Sum_probs=61.0
Q ss_pred CeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEe--------------------------------------
Q psy7062 35 QHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGG-------------------------------------- 76 (148)
Q Consensus 35 ~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~-------------------------------------- 76 (148)
+.+.+.|.++. +...++.. ....-.++++|+|+++.+.+
T Consensus 215 ~~vSvID~etm--eV~~qV~V-dgnpd~v~~spdGk~afvTsyNsE~G~tl~em~a~e~d~~vvfni~~iea~vkdGK~~ 291 (635)
T PRK02888 215 SLFTAVDAETM--EVAWQVMV-DGNLDNVDTDYDGKYAFSTCYNSEEGVTLAEMMAAERDWVVVFNIARIEEAVKAGKFK 291 (635)
T ss_pred EEEEEEECccc--eEEEEEEe-CCCcccceECCCCCEEEEeccCcccCcceeeeccccCceEEEEchHHHHHhhhCCCEE
Confidence 45666677766 55555542 22344567777877776654
Q ss_pred --CCCcEEEEECCc-----c-----cc--ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062 77 --EDCRARIWDLSL-----C-----FI--QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA 130 (148)
Q Consensus 77 --~~~~i~l~d~~~-----~-----~~--~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~ 130 (148)
.++++.+.|..+ . +. .+.+.+.++|||+++++++. -..++.++|+.+..
T Consensus 292 ~V~gn~V~VID~~t~~~~~~~v~~yIPVGKsPHGV~vSPDGkylyVank-----lS~tVSVIDv~k~k 354 (635)
T PRK02888 292 TIGGSKVPVVDGRKAANAGSALTRYVPVPKNPHGVNTSPDGKYFIANGK-----LSPTVTVIDVRKLD 354 (635)
T ss_pred EECCCEEEEEECCccccCCcceEEEEECCCCccceEECCCCCEEEEeCC-----CCCcEEEEEChhhh
Confidence 125588889887 2 22 77899999999999988876 23489999988654
No 329
>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....
Probab=96.39 E-value=0.27 Score=36.78 Aligned_cols=106 Identities=13% Similarity=0.117 Sum_probs=65.1
Q ss_pred EEEeCCCCccEEEEE-ecCC----eEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCC-----------c
Q psy7062 17 TVFDSKHLVEMVAAL-GGYQ----HIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDC-----------R 80 (148)
Q Consensus 17 ~~~~~~~~~~~l~~~-~~d~----~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~-----------~ 80 (148)
..++|+ +++++.+ +..| .++++|++++ +.+...- ....-..+.|.++++.++....+. .
T Consensus 129 ~~~Spd--g~~la~~~s~~G~e~~~l~v~Dl~tg--~~l~d~i-~~~~~~~~~W~~d~~~~~y~~~~~~~~~~~~~~~~~ 203 (414)
T PF02897_consen 129 FSVSPD--GKRLAYSLSDGGSEWYTLRVFDLETG--KFLPDGI-ENPKFSSVSWSDDGKGFFYTRFDEDQRTSDSGYPRQ 203 (414)
T ss_dssp EEETTT--SSEEEEEEEETTSSEEEEEEEETTTT--EEEEEEE-EEEESEEEEECTTSSEEEEEECSTTTSS-CCGCCEE
T ss_pred eeECCC--CCEEEEEecCCCCceEEEEEEECCCC--cCcCCcc-cccccceEEEeCCCCEEEEEEeCcccccccCCCCcE
Confidence 334455 7777654 3333 5999999998 5554321 111123499999998776654332 3
Q ss_pred EEEEECCcc-------cc---cc--ceEEEEccCCCEEEEEecCCceecCeeEEEeecCCC
Q psy7062 81 ARIWDLSLC-------FI---QQ--VNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYP 129 (148)
Q Consensus 81 i~l~d~~~~-------~~---~~--i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~ 129 (148)
++.|++.+. |. .. ...+..++++++++.....+.. ...+.+.|....
T Consensus 204 v~~~~~gt~~~~d~lvfe~~~~~~~~~~~~~s~d~~~l~i~~~~~~~--~s~v~~~d~~~~ 262 (414)
T PF02897_consen 204 VYRHKLGTPQSEDELVFEEPDEPFWFVSVSRSKDGRYLFISSSSGTS--ESEVYLLDLDDG 262 (414)
T ss_dssp EEEEETTS-GGG-EEEEC-TTCTTSEEEEEE-TTSSEEEEEEESSSS--EEEEEEEECCCT
T ss_pred EEEEECCCChHhCeeEEeecCCCcEEEEEEecCcccEEEEEEEcccc--CCeEEEEecccc
Confidence 778888765 33 22 4567889999988876654411 146888888764
No 330
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=96.36 E-value=0.18 Score=37.21 Aligned_cols=94 Identities=14% Similarity=0.071 Sum_probs=60.2
Q ss_pred ccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc---cc----ccceEE
Q psy7062 25 VEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC---FI----QQVNAL 97 (148)
Q Consensus 25 ~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~---~~----~~i~~~ 97 (148)
++.+++++.++.+..+|..++ +.+............. ..++..++.++.++.+..+|..++ .. ..+.
T Consensus 65 ~~~v~v~~~~g~v~a~d~~tG--~~~W~~~~~~~~~~~p--~v~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~-- 138 (377)
T TIGR03300 65 GGKVYAADADGTVVALDAETG--KRLWRVDLDERLSGGV--GADGGLVFVGTEKGEVIALDAEDGKELWRAKLSSEVL-- 138 (377)
T ss_pred CCEEEEECCCCeEEEEEccCC--cEeeeecCCCCcccce--EEcCCEEEEEcCCCEEEEEECCCCcEeeeeccCceee--
Confidence 456677688899999999988 6666655332211122 225677788888999999999887 11 2111
Q ss_pred EEcc--CCCEEEEEecCCceecCeeEEEeecCCCcc
Q psy7062 98 RITP--DKQLLASAEELSCCYCGAAVFVYNSCYPAA 131 (148)
Q Consensus 98 ~~sp--~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~ 131 (148)
-+| .+..++.++.++ .++.||..+.+.
T Consensus 139 -~~p~v~~~~v~v~~~~g------~l~a~d~~tG~~ 167 (377)
T TIGR03300 139 -SPPLVANGLVVVRTNDG------RLTALDAATGER 167 (377)
T ss_pred -cCCEEECCEEEEECCCC------eEEEEEcCCCce
Confidence 112 344566666666 788888776554
No 331
>KOG1008|consensus
Probab=96.36 E-value=0.0013 Score=50.87 Aligned_cols=110 Identities=14% Similarity=0.163 Sum_probs=80.3
Q ss_pred cCcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEcc-CCCEEEEEe----CCCcEEEEEC
Q psy7062 12 FGQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQE-DGKWMFTGG----EDCRARIWDL 86 (148)
Q Consensus 12 ~~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp-~~~~l~~~~----~~~~i~l~d~ 86 (148)
+...|+++....+.-++++|..+|.|-+-.++...-..-....+|....++++|++ |.++|+.|- .|..+.+||+
T Consensus 57 qy~kcva~~y~~d~cIlavG~atG~I~l~s~r~~hdSs~E~tp~~ar~Ct~lAwneLDtn~LAagldkhrnds~~~Iwdi 136 (783)
T KOG1008|consen 57 QYVKCVASFYGNDRCILAVGSATGNISLLSVRHPHDSSAEVTPGYARPCTSLAWNELDTNHLAAGLDKHRNDSSLKIWDI 136 (783)
T ss_pred CCceeehhhcCCchhhhhhccccCceEEeecCCcccccceecccccccccccccccccHHHHHhhhhhhcccCCccceec
Confidence 34567777665556789999999999999888762222334456778899999998 667777763 3457999999
Q ss_pred Ccc---------cc----ccceEEEEccCCCEEEEEecCCceecCeeEEEeecC
Q psy7062 87 SLC---------FI----QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSC 127 (148)
Q Consensus 87 ~~~---------~~----~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~ 127 (148)
.+. |. .....++|-.+.+.+++|...+ .+.++|++
T Consensus 137 ~s~ltvPke~~~fs~~~l~gqns~cwlrd~klvlaGm~sr------~~~ifdlR 184 (783)
T KOG1008|consen 137 NSLLTVPKESPLFSSSTLDGQNSVCWLRDTKLVLAGMTSR------SVHIFDLR 184 (783)
T ss_pred ccccCCCccccccccccccCccccccccCcchhhcccccc------hhhhhhhh
Confidence 887 21 3455788887888888887744 78888887
No 332
>KOG4190|consensus
Probab=96.31 E-value=0.0035 Score=48.04 Aligned_cols=70 Identities=11% Similarity=0.358 Sum_probs=54.9
Q ss_pred eEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----------cc-----ccceEEEEccCCCEEEEEecCCc
Q psy7062 50 VINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC----------FI-----QQVNALRITPDKQLLASAEELSC 114 (148)
Q Consensus 50 ~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~----------~~-----~~i~~~~~sp~~~~l~~~~~d~~ 114 (148)
+..+.+|+..|..+.--.+.+-+++++.|.++++|.++.. |. .+|..+.|-.+-++++++..
T Consensus 728 L~nf~GH~~~iRai~AidNENSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~lr~i~ScD~--- 804 (1034)
T KOG4190|consen 728 LCNFTGHQEKIRAIAAIDNENSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLADLRSIASCDG--- 804 (1034)
T ss_pred eecccCcHHHhHHHHhcccccceeeccCCceEEEEEeccccCccccceeeeEhhhccCcccceeeeeccceeeeccC---
Confidence 3456778887777766566778899999999999999865 22 77888888888888877643
Q ss_pred eecCeeEEEeecC
Q psy7062 115 CYCGAAVFVYNSC 127 (148)
Q Consensus 115 ~~~~~~i~~~d~~ 127 (148)
-|.+||.-
T Consensus 805 -----giHlWDPF 812 (1034)
T KOG4190|consen 805 -----GIHLWDPF 812 (1034)
T ss_pred -----cceeeccc
Confidence 69999955
No 333
>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3
Probab=96.11 E-value=0.25 Score=33.70 Aligned_cols=50 Identities=12% Similarity=0.222 Sum_probs=36.8
Q ss_pred cEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEe
Q psy7062 26 EMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGG 76 (148)
Q Consensus 26 ~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~ 76 (148)
+.|..+.....|.+|++....-+.+.+|.. -+.|..+.++..|.++++--
T Consensus 29 d~Lfva~~g~~Vev~~l~~~~~~~~~~F~T-v~~V~~l~y~~~GDYlvTlE 78 (215)
T PF14761_consen 29 DALFVAASGCKVEVYDLEQEECPLLCTFST-VGRVLQLVYSEAGDYLVTLE 78 (215)
T ss_pred ceEEEEcCCCEEEEEEcccCCCceeEEEcc-hhheeEEEeccccceEEEEE
Confidence 344333666789999998443356677764 47889999999999999853
No 334
>PF15390 DUF4613: Domain of unknown function (DUF4613)
Probab=96.11 E-value=0.1 Score=40.54 Aligned_cols=108 Identities=9% Similarity=0.067 Sum_probs=67.5
Q ss_pred cEEEEEeCCC---CccEEEEEecCCeEEEEeCCCCCCCc---eE--EecC---CCCCEEEEEEccCCCEEEEEeCCCcEE
Q psy7062 14 QISTVFDSKH---LVEMVAALGGYQHIRMYDFGSNNPNP---VI--NCEG---VSKNVVEVGFQEDGKWMFTGGEDCRAR 82 (148)
Q Consensus 14 ~~~~~~~~~~---~~~~l~~~~~d~~v~~~d~~~~~~~~---~~--~~~~---~~~~i~~~~~sp~~~~l~~~~~~~~i~ 82 (148)
...+.|.|.. .-.+||+ ....-|-+|.+.....+. +. +.+. ..--..+.-|+|....++.-.....-.
T Consensus 59 V~GlsW~P~~~~~~paLLAV-QHkkhVtVWqL~~s~~e~~K~l~sQtcEi~e~~pvLpQGCVWHPk~~iL~VLT~~dvSV 137 (671)
T PF15390_consen 59 VHGLSWAPPCTADTPALLAV-QHKKHVTVWQLCPSTTERNKLLMSQTCEIREPFPVLPQGCVWHPKKAILTVLTARDVSV 137 (671)
T ss_pred eeeeeecCcccCCCCceEEE-eccceEEEEEeccCccccccceeeeeeeccCCcccCCCcccccCCCceEEEEecCceeE
Confidence 3567776532 2356777 777889999987321111 11 1110 011235678999888776666555556
Q ss_pred EEECCcc-------cc--ccceEEEEccCCCEEEEEecCCceecCeeEEEeecC
Q psy7062 83 IWDLSLC-------FI--QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSC 127 (148)
Q Consensus 83 l~d~~~~-------~~--~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~ 127 (148)
+++.+.. +. +.|.|.+|.+||+.|+++-.. .-.-++||-.
T Consensus 138 ~~sV~~d~srVkaDi~~~G~IhCACWT~DG~RLVVAvGS-----sLHSyiWd~~ 186 (671)
T PF15390_consen 138 LPSVHCDSSRVKADIKTSGLIHCACWTKDGQRLVVAVGS-----SLHSYIWDSA 186 (671)
T ss_pred eeeeeeCCceEEEeccCCceEEEEEecCcCCEEEEEeCC-----eEEEEEecCc
Confidence 6666543 22 889999999999988887541 2356799854
No 335
>KOG2079|consensus
Probab=96.11 E-value=0.028 Score=46.23 Aligned_cols=88 Identities=22% Similarity=0.312 Sum_probs=62.9
Q ss_pred ccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----cc------cc
Q psy7062 25 VEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-----FI------QQ 93 (148)
Q Consensus 25 ~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-----~~------~~ 93 (148)
+..++.|++.|.+..+|.... ..+..+-..-..+|++++++.+|+.++.|-.+|.|.+||.... +. ..
T Consensus 99 ~~~ivi~Ts~ghvl~~d~~~n-L~~~~~ne~v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k~l~~i~e~~ap~t~ 177 (1206)
T KOG2079|consen 99 VVPIVIGTSHGHVLLSDMTGN-LGPLHQNERVQGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAKILKVITEHGAPVTG 177 (1206)
T ss_pred eeeEEEEcCchhhhhhhhhcc-cchhhcCCccCCcceeeEecCCCceeccccCCCcEEEEEccCCcceeeeeecCCccce
Confidence 445677677788888888763 1222222224578999999999999999999999999999885 22 33
Q ss_pred ceEEEEccCCCEEEEEecCC
Q psy7062 94 VNALRITPDKQLLASAEELS 113 (148)
Q Consensus 94 i~~~~~sp~~~~l~~~~~d~ 113 (148)
+.-+.+..++..++++...|
T Consensus 178 vi~v~~t~~nS~llt~D~~G 197 (1206)
T KOG2079|consen 178 VIFVGRTSQNSKLLTSDTGG 197 (1206)
T ss_pred EEEEEEeCCCcEEEEccCCC
Confidence 44455556667777777655
No 336
>KOG2395|consensus
Probab=96.02 E-value=0.045 Score=41.92 Aligned_cols=59 Identities=19% Similarity=0.277 Sum_probs=45.7
Q ss_pred ccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEEC
Q psy7062 25 VEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDL 86 (148)
Q Consensus 25 ~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~ 86 (148)
..++|+||.+|.||+||--.. +....+++-...|..+..+.+|++++..+.. .+.+-+.
T Consensus 441 sG~IvvgS~~GdIRLYdri~~--~AKTAlPgLG~~I~hVdvtadGKwil~Tc~t-yLlLi~t 499 (644)
T KOG2395|consen 441 SGYIVVGSLKGDIRLYDRIGR--RAKTALPGLGDAIKHVDVTADGKWILATCKT-YLLLIDT 499 (644)
T ss_pred CceEEEeecCCcEEeehhhhh--hhhhcccccCCceeeEEeeccCcEEEEeccc-EEEEEEE
Confidence 457788899999999998433 5556777888999999999999998776544 4555554
No 337
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=96.00 E-value=0.1 Score=39.48 Aligned_cols=109 Identities=10% Similarity=0.037 Sum_probs=62.8
Q ss_pred EEEEEeCCCCccEEEEEecCCe--EEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEE-eCCCc--EEEEECCcc
Q psy7062 15 ISTVFDSKHLVEMVAALGGYQH--IRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTG-GEDCR--ARIWDLSLC 89 (148)
Q Consensus 15 ~~~~~~~~~~~~~l~~~~~d~~--v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~-~~~~~--i~l~d~~~~ 89 (148)
....|+|+. ..++.+...|+. |.++|+.++ . +..+....+.-+.=.|+|||++++-. +..|. |.+.|+...
T Consensus 241 ~~P~fspDG-~~l~f~~~rdg~~~iy~~dl~~~--~-~~~Lt~~~gi~~~Ps~spdG~~ivf~Sdr~G~p~I~~~~~~g~ 316 (425)
T COG0823 241 GAPAFSPDG-SKLAFSSSRDGSPDIYLMDLDGK--N-LPRLTNGFGINTSPSWSPDGSKIVFTSDRGGRPQIYLYDLEGS 316 (425)
T ss_pred CCccCCCCC-CEEEEEECCCCCccEEEEcCCCC--c-ceecccCCccccCccCCCCCCEEEEEeCCCCCcceEEECCCCC
Confidence 455677774 333334345564 666677766 3 33343222323356899999977554 45554 555566554
Q ss_pred ----cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062 90 ----FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA 130 (148)
Q Consensus 90 ----~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~ 130 (148)
+. ..-..-.|+|||++++..+..+ +...|.+.|+.+..
T Consensus 317 ~~~riT~~~~~~~~p~~SpdG~~i~~~~~~~---g~~~i~~~~~~~~~ 361 (425)
T COG0823 317 QVTRLTFSGGGNSNPVWSPDGDKIVFESSSG---GQWDIDKNDLASGG 361 (425)
T ss_pred ceeEeeccCCCCcCccCCCCCCEEEEEeccC---CceeeEEeccCCCC
Confidence 22 3333778999999998887432 12346666665443
No 338
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=95.95 E-value=0.3 Score=36.01 Aligned_cols=99 Identities=11% Similarity=-0.005 Sum_probs=62.9
Q ss_pred ccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc--c-cc-cceE-EEE
Q psy7062 25 VEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC--F-IQ-QVNA-LRI 99 (148)
Q Consensus 25 ~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~--~-~~-~i~~-~~~ 99 (148)
++.++.++.++.+..+|.+++ +.+..... .. .... ..++..++.++.++.+..+|..++ + +. .... ..-
T Consensus 241 ~~~vy~~~~~g~l~a~d~~tG--~~~W~~~~-~~-~~~p--~~~~~~vyv~~~~G~l~~~d~~tG~~~W~~~~~~~~~~s 314 (377)
T TIGR03300 241 GGQVYAVSYQGRVAALDLRSG--RVLWKRDA-SS-YQGP--AVDDNRLYVTDADGVVVALDRRSGSELWKNDELKYRQLT 314 (377)
T ss_pred CCEEEEEEcCCEEEEEECCCC--cEEEeecc-CC-ccCc--eEeCCEEEEECCCCeEEEEECCCCcEEEccccccCCccc
Confidence 345566688899999999988 66655441 11 1111 234667777888999999999877 1 11 1100 111
Q ss_pred cc--CCCEEEEEecCCceecCeeEEEeecCCCcceecc
Q psy7062 100 TP--DKQLLASAEELSCCYCGAAVFVYNSCYPAAVVAS 135 (148)
Q Consensus 100 sp--~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~ 135 (148)
+| .+..+++++.+| .++++|..+.+.....
T Consensus 315 sp~i~g~~l~~~~~~G------~l~~~d~~tG~~~~~~ 346 (377)
T TIGR03300 315 APAVVGGYLVVGDFEG------YLHWLSREDGSFVARL 346 (377)
T ss_pred cCEEECCEEEEEeCCC------EEEEEECCCCCEEEEE
Confidence 12 466788888877 8999998777655433
No 339
>KOG3621|consensus
Probab=95.95 E-value=0.028 Score=44.10 Aligned_cols=64 Identities=13% Similarity=0.242 Sum_probs=50.0
Q ss_pred ccEEEEEecCCeEEEEeCCCCCCCceEEe---c-CCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCc
Q psy7062 25 VEMVAALGGYQHIRMYDFGSNNPNPVINC---E-GVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSL 88 (148)
Q Consensus 25 ~~~l~~~~~d~~v~~~d~~~~~~~~~~~~---~-~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~ 88 (148)
..++|.|+..+.|.++.+.......+..+ . .|...|++++|++++..+++|+..|++.+-.+.+
T Consensus 88 e~lvAagt~~g~V~v~ql~~~~p~~~~~~t~~d~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L~s 155 (726)
T KOG3621|consen 88 EYLVAAGTASGRVSVFQLNKELPRDLDYVTPCDKSHKCRVTALEWSKNGMKLYSGDSQGKVVLTELDS 155 (726)
T ss_pred hHhhhhhcCCceEEeehhhccCCCcceeeccccccCCceEEEEEecccccEEeecCCCceEEEEEech
Confidence 67788888888999998876422222222 1 2678999999999999999999999999888776
No 340
>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain
Probab=95.86 E-value=0.035 Score=28.33 Aligned_cols=29 Identities=28% Similarity=0.417 Sum_probs=26.4
Q ss_pred ccceEEEEccCCCEEEEEecCCceecCeeEEEeec
Q psy7062 92 QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNS 126 (148)
Q Consensus 92 ~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~ 126 (148)
..+..++|+|....++.++.+| .|.++.+
T Consensus 12 ~~v~~~~w~P~mdLiA~~t~~g------~v~v~Rl 40 (47)
T PF12894_consen 12 SRVSCMSWCPTMDLIALGTEDG------EVLVYRL 40 (47)
T ss_pred CcEEEEEECCCCCEEEEEECCC------eEEEEEC
Confidence 5688999999999999999988 8988887
No 341
>KOG2444|consensus
Probab=95.79 E-value=0.055 Score=37.06 Aligned_cols=97 Identities=11% Similarity=0.097 Sum_probs=56.8
Q ss_pred ccEEEEEecCCeEEEEeCCCCCCCceE-EecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc--cc-------ccc
Q psy7062 25 VEMVAALGGYQHIRMYDFGSNNPNPVI-NCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC--FI-------QQV 94 (148)
Q Consensus 25 ~~~l~~~~~d~~v~~~d~~~~~~~~~~-~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~--~~-------~~i 94 (148)
+.-++.|+.++.+.+|+..... .... ...+.....+.+..-.++.+.++++.++.++.|++... +. .++
T Consensus 70 ~~~~~vG~~dg~v~~~n~n~~g-~~~d~~~s~~e~i~~~Ip~~~~~~~~c~~~~dg~ir~~n~~p~k~~g~~g~h~~~~~ 148 (238)
T KOG2444|consen 70 SAKLMVGTSDGAVYVFNWNLEG-AHSDRVCSGEESIDLGIPNGRDSSLGCVGAQDGRIRACNIKPNKVLGYVGQHNFESG 148 (238)
T ss_pred CceEEeecccceEEEecCCccc-hHHHhhhcccccceeccccccccceeEEeccCCceeeeccccCceeeeeccccCCCc
Confidence 4556777999999999887431 1111 11222333344444456678899999999999999766 11 222
Q ss_pred eEEEEccCCCEEEEE--ecCCceecCeeEEEeecCC
Q psy7062 95 NALRITPDKQLLASA--EELSCCYCGAAVFVYNSCY 128 (148)
Q Consensus 95 ~~~~~sp~~~~l~~~--~~d~~~~~~~~i~~~d~~~ 128 (148)
-.+..+..++++..+ +.|. .+++|++..
T Consensus 149 e~~ivv~sd~~i~~a~~S~d~------~~k~W~ve~ 178 (238)
T KOG2444|consen 149 EELIVVGSDEFLKIADTSHDR------VLKKWNVEK 178 (238)
T ss_pred ceeEEecCCceEEeeccccch------hhhhcchhh
Confidence 333333344444444 4433 677777654
No 342
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=95.67 E-value=0.21 Score=34.05 Aligned_cols=101 Identities=10% Similarity=0.008 Sum_probs=62.7
Q ss_pred ccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----cc--c----c
Q psy7062 25 VEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-----FI--Q----Q 93 (148)
Q Consensus 25 ~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-----~~--~----~ 93 (148)
+..+++++.++.+..||..++ +.+..... ...+...- ..++..++.++.++.+..+|..++ .. . .
T Consensus 36 ~~~v~~~~~~~~l~~~d~~tG--~~~W~~~~-~~~~~~~~-~~~~~~v~v~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~ 111 (238)
T PF13360_consen 36 GGRVYVASGDGNLYALDAKTG--KVLWRFDL-PGPISGAP-VVDGGRVYVGTSDGSLYALDAKTGKVLWSIYLTSSPPAG 111 (238)
T ss_dssp TTEEEEEETTSEEEEEETTTS--EEEEEEEC-SSCGGSGE-EEETTEEEEEETTSEEEEEETTTSCEEEEEEE-SSCTCS
T ss_pred CCEEEEEcCCCEEEEEECCCC--CEEEEeec-ccccccee-eecccccccccceeeeEecccCCcceeeeeccccccccc
Confidence 455666589999999999998 77666553 22111111 224555666667889999998888 11 1 1
Q ss_pred -ceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceecc
Q psy7062 94 -VNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVAS 135 (148)
Q Consensus 94 -i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~ 135 (148)
........++..++.+..++ .|..+|..+.+.....
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~g------~l~~~d~~tG~~~w~~ 148 (238)
T PF13360_consen 112 VRSSSSPAVDGDRLYVGTSSG------KLVALDPKTGKLLWKY 148 (238)
T ss_dssp TB--SEEEEETTEEEEEETCS------EEEEEETTTTEEEEEE
T ss_pred cccccCceEecCEEEEEeccC------cEEEEecCCCcEEEEe
Confidence 11122223477777777655 7888998877765444
No 343
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=95.63 E-value=0.32 Score=37.05 Aligned_cols=44 Identities=18% Similarity=0.129 Sum_probs=28.5
Q ss_pred CCEEEEEeCCCcEEEEECCcc--c---c-ccceEEEEccCCCEEEEEecCC
Q psy7062 69 GKWMFTGGEDCRARIWDLSLC--F---I-QQVNALRITPDKQLLASAEELS 113 (148)
Q Consensus 69 ~~~l~~~~~~~~i~l~d~~~~--~---~-~~i~~~~~sp~~~~l~~~~~d~ 113 (148)
|..+...+.+ .+.+||+.++ + . .++..+.|++++.+++..+.+.
T Consensus 117 G~LL~~~~~~-~i~~yDw~~~~~i~~i~v~~vk~V~Ws~~g~~val~t~~~ 166 (443)
T PF04053_consen 117 GNLLGVKSSD-FICFYDWETGKLIRRIDVSAVKYVIWSDDGELVALVTKDS 166 (443)
T ss_dssp SSSEEEEETT-EEEEE-TTT--EEEEESS-E-EEEEE-TTSSEEEEE-S-S
T ss_pred CcEEEEECCC-CEEEEEhhHcceeeEEecCCCcEEEEECCCCEEEEEeCCe
Confidence 6666555444 7999999987 2 2 4579999999999999988654
No 344
>KOG0882|consensus
Probab=95.61 E-value=0.24 Score=37.40 Aligned_cols=101 Identities=12% Similarity=0.040 Sum_probs=72.8
Q ss_pred ccEEEEEecCCeEEEEeCCCCC----CCc---------eEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc--
Q psy7062 25 VEMVAALGGYQHIRMYDFGSNN----PNP---------VINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-- 89 (148)
Q Consensus 25 ~~~l~~~~~d~~v~~~d~~~~~----~~~---------~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-- 89 (148)
++..++....|.|..|..+..- .+. +..+.......+++.++|+|..+.+-+.|.++++++.+++
T Consensus 156 ~Ds~vSiD~~gmVEyWs~e~~~qfPr~~l~~~~K~eTdLy~f~K~Kt~pts~Efsp~g~qistl~~DrkVR~F~~KtGkl 235 (558)
T KOG0882|consen 156 GDSAVSIDISGMVEYWSAEGPFQFPRTNLNFELKHETDLYGFPKAKTEPTSFEFSPDGAQISTLNPDRKVRGFVFKTGKL 235 (558)
T ss_pred ccceeeccccceeEeecCCCcccCccccccccccccchhhcccccccCccceEEccccCcccccCcccEEEEEEeccchh
Confidence 6667776667889999987310 011 1112223567789999999999999999999999999887
Q ss_pred -----------------------------------cc----ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062 90 -----------------------------------FI----QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA 130 (148)
Q Consensus 90 -----------------------------------~~----~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~ 130 (148)
+. ..-..+.|...+++|+.++--| |++.++.+.+
T Consensus 236 vqeiDE~~t~~~~q~ks~y~l~~VelgRRmaverelek~~~~~~~~~~fdes~~flly~t~~g-------ikvin~~tn~ 308 (558)
T KOG0882|consen 236 VQEIDEVLTDAQYQPKSPYGLMHVELGRRMAVERELEKHGSTVGTNAVFDESGNFLLYGTILG-------IKVINLDTNT 308 (558)
T ss_pred hhhhhccchhhhhccccccccceeehhhhhhHHhhHhhhcCcccceeEEcCCCCEEEeeccee-------EEEEEeecCe
Confidence 00 3445678888999999998755 7888877655
Q ss_pred ce
Q psy7062 131 AV 132 (148)
Q Consensus 131 ~~ 132 (148)
..
T Consensus 309 v~ 310 (558)
T KOG0882|consen 309 VV 310 (558)
T ss_pred EE
Confidence 43
No 345
>KOG1920|consensus
Probab=95.41 E-value=0.94 Score=38.26 Aligned_cols=67 Identities=6% Similarity=-0.048 Sum_probs=46.5
Q ss_pred EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEE
Q psy7062 15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIW 84 (148)
Q Consensus 15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~ 84 (148)
..+.++.....+-++.+...|.+.+-|.++. .......-...|.+++||||+.+++..+..+++.+-
T Consensus 70 ~i~s~~fl~d~~~i~v~~~~G~iilvd~et~---~~eivg~vd~GI~aaswS~Dee~l~liT~~~tll~m 136 (1265)
T KOG1920|consen 70 EIVSVQFLADTNSICVITALGDIILVDPETL---ELEIVGNVDNGISAASWSPDEELLALITGRQTLLFM 136 (1265)
T ss_pred ceEEEEEecccceEEEEecCCcEEEEccccc---ceeeeeeccCceEEEeecCCCcEEEEEeCCcEEEEE
Confidence 3344432222455555588899999888876 344444457789999999999999888877766544
No 346
>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....
Probab=95.31 E-value=0.081 Score=38.83 Aligned_cols=75 Identities=17% Similarity=0.225 Sum_probs=52.4
Q ss_pred CeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----cc-------------------
Q psy7062 35 QHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC----FI------------------- 91 (148)
Q Consensus 35 ~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~----~~------------------- 91 (148)
+...++|++++ .+..+......+....|||+|+.++... ++.|.+.+.... +.
T Consensus 23 ~~y~i~d~~~~---~~~~l~~~~~~~~~~~~sP~g~~~~~v~-~~nly~~~~~~~~~~~lT~dg~~~i~nG~~dwvyeEE 98 (353)
T PF00930_consen 23 GDYYIYDIETG---EITPLTPPPPKLQDAKWSPDGKYIAFVR-DNNLYLRDLATGQETQLTTDGEPGIYNGVPDWVYEEE 98 (353)
T ss_dssp EEEEEEETTTT---EEEESS-EETTBSEEEE-SSSTEEEEEE-TTEEEEESSTTSEEEESES--TTTEEESB--HHHHHH
T ss_pred eeEEEEecCCC---ceEECcCCccccccceeecCCCeeEEEe-cCceEEEECCCCCeEEeccccceeEEcCccceecccc
Confidence 46888999986 3444443356788899999999988875 567999987554 11
Q ss_pred --ccceEEEEccCCCEEEEEecCC
Q psy7062 92 --QQVNALRITPDKQLLASAEELS 113 (148)
Q Consensus 92 --~~i~~~~~sp~~~~l~~~~~d~ 113 (148)
..-..+-||||+++|+....|.
T Consensus 99 v~~~~~~~~WSpd~~~la~~~~d~ 122 (353)
T PF00930_consen 99 VFDRRSAVWWSPDSKYLAFLRFDE 122 (353)
T ss_dssp TSSSSBSEEE-TTSSEEEEEEEE-
T ss_pred ccccccceEECCCCCEEEEEEECC
Confidence 3346788999999998876544
No 347
>KOG2041|consensus
Probab=95.21 E-value=0.05 Score=43.26 Aligned_cols=99 Identities=10% Similarity=-0.013 Sum_probs=73.5
Q ss_pred CCCCccEEEEEecCCeEEEEeCCCCCCCceEEecC--CCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc------cc-
Q psy7062 21 SKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEG--VSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC------FI- 91 (148)
Q Consensus 21 ~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~--~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~------~~- 91 (148)
.+.+.+-|.+...+|-|.+|-+=.+ .-...+.. ..+.|.+++|+.||..++..-.||.+.+=.+... ++
T Consensus 79 WNe~~QKLTtSDt~GlIiVWmlykg--sW~EEMiNnRnKSvV~SmsWn~dG~kIcIvYeDGavIVGsvdGNRIwgKeLkg 156 (1189)
T KOG2041|consen 79 WNENNQKLTTSDTSGLIIVWMLYKG--SWCEEMINNRNKSVVVSMSWNLDGTKICIVYEDGAVIVGSVDGNRIWGKELKG 156 (1189)
T ss_pred eccccccccccCCCceEEEEeeecc--cHHHHHhhCcCccEEEEEEEcCCCcEEEEEEccCCEEEEeeccceecchhcch
Confidence 3344677888678889999988655 43333222 3567899999999999999999999988777544 33
Q ss_pred ccceEEEEccCCCEEEEEecCCceecCeeEEEeecC
Q psy7062 92 QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSC 127 (148)
Q Consensus 92 ~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~ 127 (148)
.....+.|++|.+.++.+-.+| .+.+||-.
T Consensus 157 ~~l~hv~ws~D~~~~Lf~~ang------e~hlydnq 186 (1189)
T KOG2041|consen 157 QLLAHVLWSEDLEQALFKKANG------ETHLYDNQ 186 (1189)
T ss_pred heccceeecccHHHHHhhhcCC------cEEEeccc
Confidence 5566789999998887777655 78888754
No 348
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=95.18 E-value=0.36 Score=35.31 Aligned_cols=89 Identities=16% Similarity=0.187 Sum_probs=60.1
Q ss_pred CeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEe----------CCCcEEEEECCcc-------cc------
Q psy7062 35 QHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGG----------EDCRARIWDLSLC-------FI------ 91 (148)
Q Consensus 35 ~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~----------~~~~i~l~d~~~~-------~~------ 91 (148)
+.+.++|.+++ +.+.++. .+..-.+.++|+++.+++++ +...|.+||..+. +.
T Consensus 17 ~rv~viD~d~~--k~lGmi~--~g~~~~~~~spdgk~~y~a~T~~sR~~rG~RtDvv~~~D~~TL~~~~EI~iP~k~R~~ 92 (342)
T PF06433_consen 17 SRVYVIDADSG--KLLGMID--TGFLGNVALSPDGKTIYVAETFYSRGTRGERTDVVEIWDTQTLSPTGEIEIPPKPRAQ 92 (342)
T ss_dssp EEEEEEETTTT--EEEEEEE--EESSEEEEE-TTSSEEEEEEEEEEETTEEEEEEEEEEEETTTTEEEEEEEETTS-B--
T ss_pred ceEEEEECCCC--cEEEEee--cccCCceeECCCCCEEEEEEEEEeccccccceeEEEEEecCcCcccceEecCCcchhe
Confidence 47889999988 7777776 33334567899999887643 2346899999887 11
Q ss_pred --ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcc
Q psy7062 92 --QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAA 131 (148)
Q Consensus 92 --~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~ 131 (148)
.....++++.|+++++.-.... ...|.+.|+...+.
T Consensus 93 ~~~~~~~~~ls~dgk~~~V~N~TP----a~SVtVVDl~~~kv 130 (342)
T PF06433_consen 93 VVPYKNMFALSADGKFLYVQNFTP----ATSVTVVDLAAKKV 130 (342)
T ss_dssp BS--GGGEEE-TTSSEEEEEEESS----SEEEEEEETTTTEE
T ss_pred ecccccceEEccCCcEEEEEccCC----CCeEEEEECCCCce
Confidence 2234467788888888876544 55788888876554
No 349
>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs. It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].
Probab=95.09 E-value=1.5 Score=35.62 Aligned_cols=70 Identities=13% Similarity=0.095 Sum_probs=48.8
Q ss_pred CCEEEEEEccCCCEEEEEeCCCcEEEEECCc---------c---------------cc----ccceEEEEccC---CCEE
Q psy7062 58 KNVVEVGFQEDGKWMFTGGEDCRARIWDLSL---------C---------------FI----QQVNALRITPD---KQLL 106 (148)
Q Consensus 58 ~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~---------~---------------~~----~~i~~~~~sp~---~~~l 106 (148)
-.|..+.+||+|..++..+..+...+.=.+. + |. ..+..+.|+|. +..|
T Consensus 85 f~v~~i~~n~~g~~lal~G~~~v~V~~LP~r~g~~~~~~~g~~~i~Crt~~v~~~~~~~~~~~~i~qv~WhP~s~~~~~l 164 (717)
T PF10168_consen 85 FEVHQISLNPTGSLLALVGPRGVVVLELPRRWGKNGEFEDGKKEINCRTVPVDERFFTSNSSLEIKQVRWHPWSESDSHL 164 (717)
T ss_pred eeEEEEEECCCCCEEEEEcCCcEEEEEeccccCccccccCCCcceeEEEEEechhhccCCCCceEEEEEEcCCCCCCCeE
Confidence 3688899999999888777665433222111 1 11 57888999995 4778
Q ss_pred EEEecCCceecCeeEEEeecCCCccee
Q psy7062 107 ASAEELSCCYCGAAVFVYNSCYPAAVV 133 (148)
Q Consensus 107 ~~~~~d~~~~~~~~i~~~d~~~~~~~~ 133 (148)
+.-..|+ ++++||+..+..+.
T Consensus 165 ~vLtsdn------~lR~y~~~~~~~p~ 185 (717)
T PF10168_consen 165 VVLTSDN------TLRLYDISDPQHPW 185 (717)
T ss_pred EEEecCC------EEEEEecCCCCCCe
Confidence 8877777 99999998765443
No 350
>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.08 E-value=0.71 Score=33.13 Aligned_cols=93 Identities=14% Similarity=0.140 Sum_probs=58.6
Q ss_pred EEEEeCCCCccEEEEEecCC-eEEEEeCCCCCCCceEEecCCCCC--EEEEEEccCCCEEEEEeCC-----CcEEEEECC
Q psy7062 16 STVFDSKHLVEMVAALGGYQ-HIRMYDFGSNNPNPVINCEGVSKN--VVEVGFQEDGKWMFTGGED-----CRARIWDLS 87 (148)
Q Consensus 16 ~~~~~~~~~~~~l~~~~~d~-~v~~~d~~~~~~~~~~~~~~~~~~--i~~~~~sp~~~~l~~~~~~-----~~i~l~d~~ 87 (148)
.++++|.. ..-++.+-.-| ...+||.... +...++...+.+ .-.=.|||||.+|+..-+| |.|=+||.+
T Consensus 72 gi~~~p~~-~ravafARrPGtf~~vfD~~~~--~~pv~~~s~~~RHfyGHGvfs~dG~~LYATEndfd~~rGViGvYd~r 148 (366)
T COG3490 72 GIAFHPAL-PRAVAFARRPGTFAMVFDPNGA--QEPVTLVSQEGRHFYGHGVFSPDGRLLYATENDFDPNRGVIGVYDAR 148 (366)
T ss_pred CeecCCCC-cceEEEEecCCceEEEECCCCC--cCcEEEecccCceeecccccCCCCcEEEeecCCCCCCCceEEEEecc
Confidence 45556543 33334434444 3677888877 333333222221 2223689999998775443 678899998
Q ss_pred ccc------c---ccceEEEEccCCCEEEEEec
Q psy7062 88 LCF------I---QQVNALRITPDKQLLASAEE 111 (148)
Q Consensus 88 ~~~------~---~~i~~~~~sp~~~~l~~~~~ 111 (148)
.+| . -....+.|.+||+.++.++.
T Consensus 149 ~~fqrvgE~~t~GiGpHev~lm~DGrtlvvanG 181 (366)
T COG3490 149 EGFQRVGEFSTHGIGPHEVTLMADGRTLVVANG 181 (366)
T ss_pred cccceecccccCCcCcceeEEecCCcEEEEeCC
Confidence 772 2 55788999999999888764
No 351
>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin. These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus
Probab=94.98 E-value=0.49 Score=32.48 Aligned_cols=70 Identities=10% Similarity=0.158 Sum_probs=49.0
Q ss_pred EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEE-------ec-------CCCCCEEEEEEccCCCEEEEEeCCCc
Q psy7062 15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVIN-------CE-------GVSKNVVEVGFQEDGKWMFTGGEDCR 80 (148)
Q Consensus 15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~-------~~-------~~~~~i~~~~~sp~~~~l~~~~~~~~ 80 (148)
+++.+... +.+|.+.+.+|.+.+||++++ +.+.. +. .....|..+.++.+|..+++-+ +|.
T Consensus 14 ~~~~l~~~--~~~Ll~iT~~G~l~vWnl~~~--k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~ls-ng~ 88 (219)
T PF07569_consen 14 PVSFLECN--GSYLLAITSSGLLYVWNLKKG--KAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIVTLS-NGD 88 (219)
T ss_pred ceEEEEeC--CCEEEEEeCCCeEEEEECCCC--eeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEEEEe-CCC
Confidence 34445555 566666699999999999987 32211 11 2456788899999999887765 467
Q ss_pred EEEEECCcc
Q psy7062 81 ARIWDLSLC 89 (148)
Q Consensus 81 i~l~d~~~~ 89 (148)
...||..-.
T Consensus 89 ~y~y~~~L~ 97 (219)
T PF07569_consen 89 SYSYSPDLG 97 (219)
T ss_pred EEEeccccc
Confidence 888888665
No 352
>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region
Probab=94.95 E-value=0.45 Score=28.98 Aligned_cols=71 Identities=14% Similarity=0.138 Sum_probs=46.6
Q ss_pred EEEEEEcc---CC-CEEEEEeCCCcEEEEECCcc---cc--ccceEEEEccCCCEEEEEecCCce-ecCeeEEEeecCCC
Q psy7062 60 VVEVGFQE---DG-KWMFTGGEDCRARIWDLSLC---FI--QQVNALRITPDKQLLASAEELSCC-YCGAAVFVYNSCYP 129 (148)
Q Consensus 60 i~~~~~sp---~~-~~l~~~~~~~~i~l~d~~~~---~~--~~i~~~~~sp~~~~l~~~~~d~~~-~~~~~i~~~d~~~~ 129 (148)
|++++++. +| +.|+.|+.|..|++|+-... +. ..+.++.-... ..++.+..+|.+ ......++|.+.+.
T Consensus 2 V~al~~~d~d~dg~~eLlvGs~D~~IRvf~~~e~~~Ei~e~~~v~~L~~~~~-~~F~Y~l~NGTVGvY~~~~RlWRiKSK 80 (111)
T PF14783_consen 2 VTALCLFDFDGDGENELLVGSDDFEIRVFKGDEIVAEITETDKVTSLCSLGG-GRFAYALANGTVGVYDRSQRLWRIKSK 80 (111)
T ss_pred eeEEEEEecCCCCcceEEEecCCcEEEEEeCCcEEEEEecccceEEEEEcCC-CEEEEEecCCEEEEEeCcceeeeeccC
Confidence 45565553 44 48999999999999998776 32 77777776555 557888877732 11224566666654
Q ss_pred cc
Q psy7062 130 AA 131 (148)
Q Consensus 130 ~~ 131 (148)
..
T Consensus 81 ~~ 82 (111)
T PF14783_consen 81 NQ 82 (111)
T ss_pred CC
Confidence 43
No 353
>KOG4649|consensus
Probab=94.77 E-value=0.99 Score=32.01 Aligned_cols=63 Identities=13% Similarity=0.039 Sum_probs=49.6
Q ss_pred ccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc
Q psy7062 25 VEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC 89 (148)
Q Consensus 25 ~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~ 89 (148)
|++++.|+..+.+.+.+.+++ .....+..-...=......+++..+..++.|+..+..|.++.
T Consensus 63 gdfVV~GCy~g~lYfl~~~tG--s~~w~f~~~~~vk~~a~~d~~~glIycgshd~~~yalD~~~~ 125 (354)
T KOG4649|consen 63 GDFVVLGCYSGGLYFLCVKTG--SQIWNFVILETVKVRAQCDFDGGLIYCGSHDGNFYALDPKTY 125 (354)
T ss_pred CCEEEEEEccCcEEEEEecch--hheeeeeehhhhccceEEcCCCceEEEecCCCcEEEeccccc
Confidence 778899999999999999998 777766543222222344679999999999999999999887
No 354
>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit. CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....
Probab=94.71 E-value=0.99 Score=32.61 Aligned_cols=99 Identities=11% Similarity=0.093 Sum_probs=60.9
Q ss_pred EEEEeCCCCccEEEEEecCCeEEEEeCCCCCCC-ceEEecC-CCCCEEEEEEccCCCEEEEEeCCCcEEEEECC--cc-c
Q psy7062 16 STVFDSKHLVEMVAALGGYQHIRMYDFGSNNPN-PVINCEG-VSKNVVEVGFQEDGKWMFTGGEDCRARIWDLS--LC-F 90 (148)
Q Consensus 16 ~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~-~~~~~~~-~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~--~~-~ 90 (148)
..+..+- +..|+. +..+.+.+|+++.. + .+....- ....+.++.. .+.+++.|+....+.++..+ .. +
T Consensus 91 V~ai~~~--~~~lv~-~~g~~l~v~~l~~~--~~l~~~~~~~~~~~i~sl~~--~~~~I~vgD~~~sv~~~~~~~~~~~l 163 (321)
T PF03178_consen 91 VTAICSF--NGRLVV-AVGNKLYVYDLDNS--KTLLKKAFYDSPFYITSLSV--FKNYILVGDAMKSVSLLRYDEENNKL 163 (321)
T ss_dssp EEEEEEE--TTEEEE-EETTEEEEEEEETT--SSEEEEEEE-BSSSEEEEEE--ETTEEEEEESSSSEEEEEEETTTE-E
T ss_pred ceEhhhh--CCEEEE-eecCEEEEEEccCc--ccchhhheecceEEEEEEec--cccEEEEEEcccCEEEEEEEccCCEE
Confidence 4444443 334555 44689999999987 4 3322221 2335555544 46688889887777766443 33 2
Q ss_pred c--------ccceEEEEccCCCEEEEEecCCceecCeeEEEeecC
Q psy7062 91 I--------QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSC 127 (148)
Q Consensus 91 ~--------~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~ 127 (148)
. ..+.++.+-++++.++.+..+| .+.++...
T Consensus 164 ~~va~d~~~~~v~~~~~l~d~~~~i~~D~~g------nl~~l~~~ 202 (321)
T PF03178_consen 164 ILVARDYQPRWVTAAEFLVDEDTIIVGDKDG------NLFVLRYN 202 (321)
T ss_dssp EEEEEESS-BEEEEEEEE-SSSEEEEEETTS------EEEEEEE-
T ss_pred EEEEecCCCccEEEEEEecCCcEEEEEcCCC------eEEEEEEC
Confidence 1 5577777876667888888877 67766654
No 355
>PRK13616 lipoprotein LpqB; Provisional
Probab=94.67 E-value=1.1 Score=35.41 Aligned_cols=89 Identities=13% Similarity=0.079 Sum_probs=51.8
Q ss_pred EEEEEeCCCCccEEEEEe------cCC--eEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCC--------
Q psy7062 15 ISTVFDSKHLVEMVAALG------GYQ--HIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGED-------- 78 (148)
Q Consensus 15 ~~~~~~~~~~~~~l~~~~------~d~--~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~-------- 78 (148)
...+.+++ |+.++..- .|. .+.+.+.... ......+ ...+.-.|+|+|..+.+.+..
T Consensus 353 sspaiSpd--G~~vA~v~~~~~~~~d~~s~Lwv~~~gg~---~~~lt~g--~~~t~PsWspDG~~lw~v~dg~~~~~v~~ 425 (591)
T PRK13616 353 TSAALSRS--GRQVAAVVTLGRGAPDPASSLWVGPLGGV---AVQVLEG--HSLTRPSWSLDADAVWVVVDGNTVVRVIR 425 (591)
T ss_pred ccceECCC--CCEEEEEEeecCCCCCcceEEEEEeCCCc---ceeeecC--CCCCCceECCCCCceEEEecCcceEEEec
Confidence 45566676 55554433 233 4555554322 2222222 237778999998866665422
Q ss_pred ----CcEEEEECCcc-c----cccceEEEEccCCCEEEEEe
Q psy7062 79 ----CRARIWDLSLC-F----IQQVNALRITPDKQLLASAE 110 (148)
Q Consensus 79 ----~~i~l~d~~~~-~----~~~i~~~~~sp~~~~l~~~~ 110 (148)
+.+.+.++..+ . ...|..+.|||||..++...
T Consensus 426 ~~~~gql~~~~vd~ge~~~~~~g~Issl~wSpDG~RiA~i~ 466 (591)
T PRK13616 426 DPATGQLARTPVDASAVASRVPGPISELQLSRDGVRAAMII 466 (591)
T ss_pred cCCCceEEEEeccCchhhhccCCCcCeEEECCCCCEEEEEE
Confidence 23444455443 1 25799999999999888766
No 356
>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins. It contains a characteristic DLL sequence motif.
Probab=94.61 E-value=0.16 Score=25.34 Aligned_cols=30 Identities=27% Similarity=0.389 Sum_probs=21.6
Q ss_pred cceEEEEccCC---CEEEEEecCCceecCeeEEEeecCC
Q psy7062 93 QVNALRITPDK---QLLASAEELSCCYCGAAVFVYNSCY 128 (148)
Q Consensus 93 ~i~~~~~sp~~---~~l~~~~~d~~~~~~~~i~~~d~~~ 128 (148)
.++++.|+|+. .+|+.+-..+ .|.++|.++
T Consensus 2 AvR~~kFsP~~~~~DLL~~~E~~g------~vhi~D~R~ 34 (43)
T PF10313_consen 2 AVRCCKFSPEPGGNDLLAWAEHQG------RVHIVDTRS 34 (43)
T ss_pred CeEEEEeCCCCCcccEEEEEccCC------eEEEEEccc
Confidence 57888999744 3666666544 899999884
No 357
>KOG2395|consensus
Probab=94.49 E-value=0.44 Score=36.84 Aligned_cols=84 Identities=11% Similarity=0.118 Sum_probs=56.1
Q ss_pred cEEEEEecCCeEEEEeCCCCCCCceEEecCCC----CCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----cc---cc
Q psy7062 26 EMVAALGGYQHIRMYDFGSNNPNPVINCEGVS----KNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-----FI---QQ 93 (148)
Q Consensus 26 ~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~----~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-----~~---~~ 93 (148)
+.|+. -++..|.-||.+-.....+...+.|. ....|++-.. .-+++.|+.+|.|+|||--.. |+ .+
T Consensus 396 ~TlvG-Ls~n~vfriDpRv~~~~kl~~~q~kqy~~k~nFsc~aTT~-sG~IvvgS~~GdIRLYdri~~~AKTAlPgLG~~ 473 (644)
T KOG2395|consen 396 QTLVG-LSDNSVFRIDPRVQGKNKLAVVQSKQYSTKNNFSCFATTE-SGYIVVGSLKGDIRLYDRIGRRAKTALPGLGDA 473 (644)
T ss_pred ccEEe-ecCCceEEecccccCcceeeeeeccccccccccceeeecC-CceEEEeecCCcEEeehhhhhhhhhcccccCCc
Confidence 34444 55678888899865323444444332 2233333322 336889999999999998332 44 88
Q ss_pred ceEEEEccCCCEEEEEec
Q psy7062 94 VNALRITPDKQLLASAEE 111 (148)
Q Consensus 94 i~~~~~sp~~~~l~~~~~ 111 (148)
|..+..+.+|++++..+.
T Consensus 474 I~hVdvtadGKwil~Tc~ 491 (644)
T KOG2395|consen 474 IKHVDVTADGKWILATCK 491 (644)
T ss_pred eeeEEeeccCcEEEEecc
Confidence 999999999999888875
No 358
>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....
Probab=94.16 E-value=0.5 Score=35.33 Aligned_cols=71 Identities=13% Similarity=0.087 Sum_probs=48.3
Q ss_pred EEEEEEccCCCEEEEE-eCCC----cEEEEECCcc--c----c-ccceEEEEccCCCEEEEEecCCcee-----cCeeEE
Q psy7062 60 VVEVGFQEDGKWMFTG-GEDC----RARIWDLSLC--F----I-QQVNALRITPDKQLLASAEELSCCY-----CGAAVF 122 (148)
Q Consensus 60 i~~~~~sp~~~~l~~~-~~~~----~i~l~d~~~~--~----~-~~i~~~~~sp~~~~l~~~~~d~~~~-----~~~~i~ 122 (148)
+...++||+|+.++.+ +..| .++++|+.++ + . .....+.|.++++.|+....+..-. ....|+
T Consensus 126 ~~~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~d~i~~~~~~~~~W~~d~~~~~y~~~~~~~~~~~~~~~~~v~ 205 (414)
T PF02897_consen 126 LGGFSVSPDGKRLAYSLSDGGSEWYTLRVFDLETGKFLPDGIENPKFSSVSWSDDGKGFFYTRFDEDQRTSDSGYPRQVY 205 (414)
T ss_dssp EEEEEETTTSSEEEEEEEETTSSEEEEEEEETTTTEEEEEEEEEEESEEEEECTTSSEEEEEECSTTTSS-CCGCCEEEE
T ss_pred eeeeeECCCCCEEEEEecCCCCceEEEEEEECCCCcCcCCcccccccceEEEeCCCCEEEEEEeCcccccccCCCCcEEE
Confidence 3467889999977654 4433 5999999988 2 2 2233499999998877776555322 255788
Q ss_pred EeecCCCc
Q psy7062 123 VYNSCYPA 130 (148)
Q Consensus 123 ~~d~~~~~ 130 (148)
.|++-++.
T Consensus 206 ~~~~gt~~ 213 (414)
T PF02897_consen 206 RHKLGTPQ 213 (414)
T ss_dssp EEETTS-G
T ss_pred EEECCCCh
Confidence 88877654
No 359
>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins. It contains a characteristic DLL sequence motif.
Probab=94.13 E-value=0.31 Score=24.32 Aligned_cols=31 Identities=16% Similarity=0.057 Sum_probs=24.3
Q ss_pred CEEEEEEccCCC---EEEEEeCCCcEEEEECCcc
Q psy7062 59 NVVEVGFQEDGK---WMFTGGEDCRARIWDLSLC 89 (148)
Q Consensus 59 ~i~~~~~sp~~~---~l~~~~~~~~i~l~d~~~~ 89 (148)
.+.+++|||+.. +|+..-..+.+.++|+++.
T Consensus 2 AvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~~ 35 (43)
T PF10313_consen 2 AVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRSN 35 (43)
T ss_pred CeEEEEeCCCCCcccEEEEEccCCeEEEEEcccC
Confidence 577899998544 6777767789999999854
No 360
>KOG1832|consensus
Probab=94.10 E-value=0.095 Score=42.84 Aligned_cols=77 Identities=9% Similarity=0.097 Sum_probs=60.1
Q ss_pred CceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----cc---ccceEEEEccCCCEEEEEecCCceecCe
Q psy7062 48 NPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-----FI---QQVNALRITPDKQLLASAEELSCCYCGA 119 (148)
Q Consensus 48 ~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-----~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~ 119 (148)
+..+.+..|+...++++|+-+.+.++.|+..|.+++|+..++ .. +.++.+.-+.+|..+++.+.-. ..
T Consensus 1092 r~w~~frd~~~~fTc~afs~~~~hL~vG~~~Geik~~nv~sG~~e~s~ncH~SavT~vePs~dgs~~Ltsss~S----~P 1167 (1516)
T KOG1832|consen 1092 RSWRSFRDETALFTCIAFSGGTNHLAVGSHAGEIKIFNVSSGSMEESVNCHQSAVTLVEPSVDGSTQLTSSSSS----SP 1167 (1516)
T ss_pred ccchhhhccccceeeEEeecCCceEEeeeccceEEEEEccCccccccccccccccccccccCCcceeeeecccc----Cc
Confidence 345667778889999999999999999999999999999998 11 6777887778888776665422 23
Q ss_pred eEEEeecCC
Q psy7062 120 AVFVYNSCY 128 (148)
Q Consensus 120 ~i~~~d~~~ 128 (148)
...+|+...
T Consensus 1168 lsaLW~~~s 1176 (1516)
T KOG1832|consen 1168 LSALWDASS 1176 (1516)
T ss_pred hHHHhcccc
Confidence 467888654
No 361
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=93.91 E-value=1.3 Score=30.03 Aligned_cols=99 Identities=10% Similarity=0.046 Sum_probs=61.5
Q ss_pred ccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCC----------EEEEEEccCCCEEEEEeCCCcEEEEECCcc---cc
Q psy7062 25 VEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKN----------VVEVGFQEDGKWMFTGGEDCRARIWDLSLC---FI 91 (148)
Q Consensus 25 ~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~----------i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~---~~ 91 (148)
++.++.+..++.+..+|++++ +.+......... +..-.+..++ .++.++.++.+.-+|+.++ ..
T Consensus 122 ~~~~~~~~~~g~l~~~d~~tG--~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~g~~~~~d~~tg~~~w~ 198 (238)
T PF13360_consen 122 GDRLYVGTSSGKLVALDPKTG--KLLWKYPVGEPRGSSPISSFSDINGSPVISDG-RVYVSSGDGRVVAVDLATGEKLWS 198 (238)
T ss_dssp TTEEEEEETCSEEEEEETTTT--EEEEEEESSTT-SS--EEEETTEEEEEECCTT-EEEEECCTSSEEEEETTTTEEEEE
T ss_pred cCEEEEEeccCcEEEEecCCC--cEEEEeecCCCCCCcceeeecccccceEEECC-EEEEEcCCCeEEEEECCCCCEEEE
Confidence 566677677899999999999 776666543311 1222222344 6666666775333399887 22
Q ss_pred ccceEEE--EccCCCEEEEEecCCceecCeeEEEeecCCCcce
Q psy7062 92 QQVNALR--ITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAV 132 (148)
Q Consensus 92 ~~i~~~~--~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~ 132 (148)
..+.... ...++..++.++.++ .+..||+.+.+..
T Consensus 199 ~~~~~~~~~~~~~~~~l~~~~~~~------~l~~~d~~tG~~~ 235 (238)
T PF13360_consen 199 KPISGIYSLPSVDGGTLYVTSSDG------RLYALDLKTGKVV 235 (238)
T ss_dssp ECSS-ECECEECCCTEEEEEETTT------EEEEEETTTTEEE
T ss_pred ecCCCccCCceeeCCEEEEEeCCC------EEEEEECCCCCEE
Confidence 1122221 345777777777766 8999999987654
No 362
>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]
Probab=93.65 E-value=0.68 Score=35.86 Aligned_cols=60 Identities=17% Similarity=0.261 Sum_probs=48.1
Q ss_pred ccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECC
Q psy7062 25 VEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLS 87 (148)
Q Consensus 25 ~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~ 87 (148)
+.++|.|+..|.|++||--.. +....+++-...|..+..+.+|++++..+.. .+.+-|++
T Consensus 573 sGyIa~as~kGDirLyDRig~--rAKtalP~lG~aIk~idvta~Gk~ilaTCk~-yllL~d~~ 632 (776)
T COG5167 573 SGYIAAASRKGDIRLYDRIGK--RAKTALPGLGDAIKHIDVTANGKHILATCKN-YLLLTDVP 632 (776)
T ss_pred CceEEEecCCCceeeehhhcc--hhhhcCcccccceeeeEeecCCcEEEEeecc-eEEEEecc
Confidence 578899999999999998765 5566677778899999999999988776644 56666764
No 363
>KOG2079|consensus
Probab=93.55 E-value=0.19 Score=41.73 Aligned_cols=75 Identities=12% Similarity=0.026 Sum_probs=56.7
Q ss_pred EEEEccCCCEEEEEeCCCcEEEEECCcc---c------cccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcce
Q psy7062 62 EVGFQEDGKWMFTGGEDCRARIWDLSLC---F------IQQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAV 132 (148)
Q Consensus 62 ~~~~sp~~~~l~~~~~~~~i~l~d~~~~---~------~~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~ 132 (148)
.++..-.+-+++.|+..|.+-++|.... + +.++.+++|+-+|+.++.|-.+| .|.+||....+..
T Consensus 92 v~s~a~~~~~ivi~Ts~ghvl~~d~~~nL~~~~~ne~v~~~Vtsvafn~dg~~l~~G~~~G------~V~v~D~~~~k~l 165 (1206)
T KOG2079|consen 92 VISSAIVVVPIVIGTSHGHVLLSDMTGNLGPLHQNERVQGPVTSVAFNQDGSLLLAGLGDG------HVTVWDMHRAKIL 165 (1206)
T ss_pred eeeeeeeeeeEEEEcCchhhhhhhhhcccchhhcCCccCCcceeeEecCCCceeccccCCC------cEEEEEccCCcce
Confidence 3334445667888888888888887663 1 18999999999999999998877 8999999876666
Q ss_pred eccCcccCcc
Q psy7062 133 VASNTLVKPQ 142 (148)
Q Consensus 133 ~~~~~~~~~~ 142 (148)
....+...|.
T Consensus 166 ~~i~e~~ap~ 175 (1206)
T KOG2079|consen 166 KVITEHGAPV 175 (1206)
T ss_pred eeeeecCCcc
Confidence 6555544443
No 364
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=93.49 E-value=0.44 Score=36.30 Aligned_cols=55 Identities=18% Similarity=0.232 Sum_probs=36.7
Q ss_pred ccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEE
Q psy7062 25 VEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWD 85 (148)
Q Consensus 25 ~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d 85 (148)
|.+|.. ..++.|.+||.+++ +.++.+.. . .|..+.|+++|.+++..+.+ .+.+++
T Consensus 117 G~LL~~-~~~~~i~~yDw~~~--~~i~~i~v-~-~vk~V~Ws~~g~~val~t~~-~i~il~ 171 (443)
T PF04053_consen 117 GNLLGV-KSSDFICFYDWETG--KLIRRIDV-S-AVKYVIWSDDGELVALVTKD-SIYILK 171 (443)
T ss_dssp SSSEEE-EETTEEEEE-TTT----EEEEESS---E-EEEEE-TTSSEEEEE-S--SEEEEE
T ss_pred CcEEEE-ECCCCEEEEEhhHc--ceeeEEec-C-CCcEEEEECCCCEEEEEeCC-eEEEEE
Confidence 677777 45568999999998 88888873 2 38899999999999888766 444443
No 365
>KOG2444|consensus
Probab=93.22 E-value=0.25 Score=34.01 Aligned_cols=63 Identities=10% Similarity=0.073 Sum_probs=48.5
Q ss_pred ccEEEEEecCCeEEEEeCCCCCCCceEEecCCC-CCEEEEEEccCCCEEEEE--eCCCcEEEEECCcc
Q psy7062 25 VEMVAALGGYQHIRMYDFGSNNPNPVINCEGVS-KNVVEVGFQEDGKWMFTG--GEDCRARIWDLSLC 89 (148)
Q Consensus 25 ~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~-~~i~~~~~sp~~~~l~~~--~~~~~i~l~d~~~~ 89 (148)
+.+.++++.++.++.|+++.. +.+...-.|+ .....+.++..++.+... |.+..++.|++...
T Consensus 114 ~~~~c~~~~dg~ir~~n~~p~--k~~g~~g~h~~~~~e~~ivv~sd~~i~~a~~S~d~~~k~W~ve~~ 179 (238)
T KOG2444|consen 114 SSLGCVGAQDGRIRACNIKPN--KVLGYVGQHNFESGEELIVVGSDEFLKIADTSHDRVLKKWNVEKI 179 (238)
T ss_pred cceeEEeccCCceeeeccccC--ceeeeeccccCCCcceeEEecCCceEEeeccccchhhhhcchhhh
Confidence 457788899999999999887 6666665566 556666777777777777 77888889988665
No 366
>KOG4649|consensus
Probab=92.91 E-value=2.4 Score=30.12 Aligned_cols=96 Identities=10% Similarity=0.022 Sum_probs=65.4
Q ss_pred ccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----cc--ccc-eE
Q psy7062 25 VEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-----FI--QQV-NA 96 (148)
Q Consensus 25 ~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-----~~--~~i-~~ 96 (148)
..+++.|+..+.+..-|..++ +.+..- .-..++.+-+.- -|.+++.|+..+.+.+.+.+++ |. ..+ ..
T Consensus 23 kT~v~igSHs~~~~avd~~sG--~~~We~-ilg~RiE~sa~v-vgdfVV~GCy~g~lYfl~~~tGs~~w~f~~~~~vk~~ 98 (354)
T KOG4649|consen 23 KTLVVIGSHSGIVIAVDPQSG--NLIWEA-ILGVRIECSAIV-VGDFVVLGCYSGGLYFLCVKTGSQIWNFVILETVKVR 98 (354)
T ss_pred ceEEEEecCCceEEEecCCCC--cEEeeh-hhCceeeeeeEE-ECCEEEEEEccCcEEEEEecchhheeeeeehhhhccc
Confidence 577788788888888899988 544332 123333332211 3777999999999999999998 32 222 22
Q ss_pred EEEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062 97 LRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA 130 (148)
Q Consensus 97 ~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~ 130 (148)
....+++..+..++.|+ ..+..|.++..
T Consensus 99 a~~d~~~glIycgshd~------~~yalD~~~~~ 126 (354)
T KOG4649|consen 99 AQCDFDGGLIYCGSHDG------NFYALDPKTYG 126 (354)
T ss_pred eEEcCCCceEEEecCCC------cEEEecccccc
Confidence 34567999999999988 66666665443
No 367
>KOG3630|consensus
Probab=92.65 E-value=0.35 Score=40.60 Aligned_cols=91 Identities=15% Similarity=0.138 Sum_probs=61.7
Q ss_pred EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----
Q psy7062 15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC----- 89 (148)
Q Consensus 15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~----- 89 (148)
.+..|.|...-. .+++..|..|++..+.... .....+. .+...++++|+|.|+.++.|...|++.-|...-.
T Consensus 159 ~~~~wnP~vp~n-~av~l~dlsl~V~~~~~~~-~~v~s~p-~t~~~Tav~WSprGKQl~iG~nnGt~vQy~P~leik~~i 235 (1405)
T KOG3630|consen 159 LKNVWNPLVPLN-SAVDLSDLSLRVKSTKQLA-QNVTSFP-VTNSQTAVLWSPRGKQLFIGRNNGTEVQYEPSLEIKSEI 235 (1405)
T ss_pred ccccccCCccch-hhhhccccchhhhhhhhhh-hhhcccC-cccceeeEEeccccceeeEecCCCeEEEeecccceeecc
Confidence 455566544333 3444777888887776541 2222332 4677899999999999999999999988866433
Q ss_pred -----cc-ccceEEEEccCCCEEEE
Q psy7062 90 -----FI-QQVNALRITPDKQLLAS 108 (148)
Q Consensus 90 -----~~-~~i~~~~~sp~~~~l~~ 108 (148)
++ .++.++.|-....++++
T Consensus 236 p~Pp~~e~yrvl~v~Wl~t~eflvv 260 (1405)
T KOG3630|consen 236 PEPPVEENYRVLSVTWLSTQEFLVV 260 (1405)
T ss_pred cCCCcCCCcceeEEEEecceeEEEE
Confidence 22 78999999776665554
No 368
>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus
Probab=92.61 E-value=3.1 Score=31.55 Aligned_cols=40 Identities=13% Similarity=0.121 Sum_probs=30.2
Q ss_pred EEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCC
Q psy7062 16 STVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKN 59 (148)
Q Consensus 16 ~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~ 59 (148)
.+..+|. +.+.|+..+-|.|.++|+.++ ..++.+++..+.
T Consensus 312 ~i~~sP~--~~laA~tDslGRV~LiD~~~~--~vvrmWKGYRdA 351 (415)
T PF14655_consen 312 SICLSPS--GRLAAVTDSLGRVLLIDVARG--IVVRMWKGYRDA 351 (415)
T ss_pred EEEECCC--CCEEEEEcCCCcEEEEECCCC--hhhhhhccCccc
Confidence 4444565 788888666679999999998 888888887653
No 369
>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A.
Probab=92.48 E-value=3.1 Score=30.17 Aligned_cols=87 Identities=15% Similarity=0.127 Sum_probs=50.4
Q ss_pred CCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCc-c---------c-
Q psy7062 22 KHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSL-C---------F- 90 (148)
Q Consensus 22 ~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~-~---------~- 90 (148)
..+|.++++++......-||.... .-...-.....+|..+.|+|++...+.+ ..+.+++-+... . .
T Consensus 153 ~~dG~~vavs~~G~~~~s~~~G~~--~w~~~~r~~~~riq~~gf~~~~~lw~~~-~Gg~~~~s~~~~~~~~w~~~~~~~~ 229 (302)
T PF14870_consen 153 SSDGRYVAVSSRGNFYSSWDPGQT--TWQPHNRNSSRRIQSMGFSPDGNLWMLA-RGGQIQFSDDPDDGETWSEPIIPIK 229 (302)
T ss_dssp -TTS-EEEEETTSSEEEEE-TT-S--S-EEEE--SSS-EEEEEE-TTS-EEEEE-TTTEEEEEE-TTEEEEE---B-TTS
T ss_pred CCCCcEEEEECcccEEEEecCCCc--cceEEccCccceehhceecCCCCEEEEe-CCcEEEEccCCCCccccccccCCcc
Confidence 344888888544445667776543 2222333356889999999998876655 888898888322 2 1
Q ss_pred c--ccceEEEEccCCCEEEEEec
Q psy7062 91 I--QQVNALRITPDKQLLASAEE 111 (148)
Q Consensus 91 ~--~~i~~~~~sp~~~~l~~~~~ 111 (148)
. -.+..++|.++....++++.
T Consensus 230 ~~~~~~ld~a~~~~~~~wa~gg~ 252 (302)
T PF14870_consen 230 TNGYGILDLAYRPPNEIWAVGGS 252 (302)
T ss_dssp S--S-EEEEEESSSS-EEEEEST
T ss_pred cCceeeEEEEecCCCCEEEEeCC
Confidence 1 44788899988887776654
No 370
>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus
Probab=92.43 E-value=3.3 Score=31.41 Aligned_cols=37 Identities=8% Similarity=0.047 Sum_probs=31.5
Q ss_pred ecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc
Q psy7062 53 CEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC 89 (148)
Q Consensus 53 ~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~ 89 (148)
+......+..+..+|++++.++.+.-|.|.|+|+..+
T Consensus 303 l~D~~R~~~~i~~sP~~~laA~tDslGRV~LiD~~~~ 339 (415)
T PF14655_consen 303 LPDSKREGESICLSPSGRLAAVTDSLGRVLLIDVARG 339 (415)
T ss_pred eccCCceEEEEEECCCCCEEEEEcCCCcEEEEECCCC
Confidence 3334566899999999999999888899999999988
No 371
>PRK11138 outer membrane biogenesis protein BamB; Provisional
Probab=92.15 E-value=3.8 Score=30.52 Aligned_cols=21 Identities=5% Similarity=0.036 Sum_probs=15.1
Q ss_pred CCEEEEEeCCCcEEEEECCcc
Q psy7062 69 GKWMFTGGEDCRARIWDLSLC 89 (148)
Q Consensus 69 ~~~l~~~~~~~~i~l~d~~~~ 89 (148)
+..++.++.+|.+...|..++
T Consensus 335 ~g~l~v~~~~G~l~~ld~~tG 355 (394)
T PRK11138 335 NGYLVVGDSEGYLHWINREDG 355 (394)
T ss_pred CCEEEEEeCCCEEEEEECCCC
Confidence 445666777788888887776
No 372
>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....
Probab=91.87 E-value=0.93 Score=33.29 Aligned_cols=58 Identities=14% Similarity=0.290 Sum_probs=41.5
Q ss_pred ccCCCEEEEEe---------CCCcEEEEECCcc----cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCC
Q psy7062 66 QEDGKWMFTGG---------EDCRARIWDLSLC----FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYP 129 (148)
Q Consensus 66 sp~~~~l~~~~---------~~~~i~l~d~~~~----~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~ 129 (148)
|||+++++... ..+...++|+.++ +. ..+....|+|+|+.++.... . .|++++....
T Consensus 1 S~d~~~~l~~~~~~~~~r~s~~~~y~i~d~~~~~~~~l~~~~~~~~~~~~sP~g~~~~~v~~-~------nly~~~~~~~ 73 (353)
T PF00930_consen 1 SPDGKFVLFATNYTKQWRHSFKGDYYIYDIETGEITPLTPPPPKLQDAKWSPDGKYIAFVRD-N------NLYLRDLATG 73 (353)
T ss_dssp -TTSSEEEEEEEEEEESSSEEEEEEEEEETTTTEEEESS-EETTBSEEEE-SSSTEEEEEET-T------EEEEESSTTS
T ss_pred CCCCCeEEEEECcEEeeeeccceeEEEEecCCCceEECcCCccccccceeecCCCeeEEEec-C------ceEEEECCCC
Confidence 57888776632 2357889999987 22 57889999999999888864 2 5888887655
Q ss_pred c
Q psy7062 130 A 130 (148)
Q Consensus 130 ~ 130 (148)
.
T Consensus 74 ~ 74 (353)
T PF00930_consen 74 Q 74 (353)
T ss_dssp E
T ss_pred C
Confidence 3
No 373
>KOG4441|consensus
Probab=91.58 E-value=4 Score=32.33 Aligned_cols=103 Identities=18% Similarity=0.191 Sum_probs=63.4
Q ss_pred ccEEEEEecC-C-----eEEEEeCCCCCCCceEEecCCCCCEEEEEEc-cCCCEEEEEeCCC-----cEEEEECCcc-cc
Q psy7062 25 VEMVAALGGY-Q-----HIRMYDFGSNNPNPVINCEGVSKNVVEVGFQ-EDGKWMFTGGEDC-----RARIWDLSLC-FI 91 (148)
Q Consensus 25 ~~~l~~~~~d-~-----~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~s-p~~~~l~~~~~~~-----~i~l~d~~~~-~~ 91 (148)
+.+.++|+.+ + ++.+||..+.....+..+. .. -..+... -+|...+.|+.|| .+..||..+. +.
T Consensus 333 ~~lYv~GG~~~~~~~l~~ve~YD~~~~~W~~~a~M~--~~-R~~~~v~~l~g~iYavGG~dg~~~l~svE~YDp~~~~W~ 409 (571)
T KOG4441|consen 333 GKLYVVGGYDSGSDRLSSVERYDPRTNQWTPVAPMN--TK-RSDFGVAVLDGKLYAVGGFDGEKSLNSVECYDPVTNKWT 409 (571)
T ss_pred CEEEEEccccCCCcccceEEEecCCCCceeccCCcc--Cc-cccceeEEECCEEEEEeccccccccccEEEecCCCCccc
Confidence 5778888888 2 6889999887322222222 22 2223333 3788888898886 4778888776 22
Q ss_pred ------ccceEEEEc-cCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062 92 ------QQVNALRIT-PDKQLLASAEELSCCYCGAAVFVYNSCYPA 130 (148)
Q Consensus 92 ------~~i~~~~~s-p~~~~l~~~~~d~~~~~~~~i~~~d~~~~~ 130 (148)
.+....... -+|+..+.|+.++.-..-..+..||..+..
T Consensus 410 ~va~m~~~r~~~gv~~~~g~iYi~GG~~~~~~~l~sve~YDP~t~~ 455 (571)
T KOG4441|consen 410 PVAPMLTRRSGHGVAVLGGKLYIIGGGDGSSNCLNSVECYDPETNT 455 (571)
T ss_pred ccCCCCcceeeeEEEEECCEEEEEcCcCCCccccceEEEEcCCCCc
Confidence 222233322 388888888877744334578899977554
No 374
>COG3391 Uncharacterized conserved protein [Function unknown]
Probab=91.47 E-value=4.6 Score=30.12 Aligned_cols=110 Identities=15% Similarity=0.175 Sum_probs=74.8
Q ss_pred CcEEEEEeCCCCccEEEEEec---CCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEe-CCCcEEEEECCc
Q psy7062 13 GQISTVFDSKHLVEMVAALGG---YQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGG-EDCRARIWDLSL 88 (148)
Q Consensus 13 ~~~~~~~~~~~~~~~l~~~~~---d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~-~~~~i~l~d~~~ 88 (148)
.+..++++++ ++.+.++.. ++++.+.|..+. ..+.....-.. -..++++|+|..++... .++.+.+.|...
T Consensus 117 ~P~~~~~~~~--~~~vYV~n~~~~~~~vsvid~~t~--~~~~~~~vG~~-P~~~a~~p~g~~vyv~~~~~~~v~vi~~~~ 191 (381)
T COG3391 117 GPVGLAVDPD--GKYVYVANAGNGNNTVSVIDAATN--KVTATIPVGNT-PTGVAVDPDGNKVYVTNSDDNTVSVIDTSG 191 (381)
T ss_pred CCceEEECCC--CCEEEEEecccCCceEEEEeCCCC--eEEEEEecCCC-cceEEECCCCCeEEEEecCCCeEEEEeCCC
Confidence 5678888888 444444343 578888888887 66655442222 28899999999666555 678999999765
Q ss_pred c--c-------c---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062 89 C--F-------I---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA 130 (148)
Q Consensus 89 ~--~-------~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~ 130 (148)
. . . ...+.+.++|++..+....... ....+...|..+..
T Consensus 192 ~~v~~~~~~~~~~~~~~P~~i~v~~~g~~~yV~~~~~---~~~~v~~id~~~~~ 242 (381)
T COG3391 192 NSVVRGSVGSLVGVGTGPAGIAVDPDGNRVYVANDGS---GSNNVLKIDTATGN 242 (381)
T ss_pred cceeccccccccccCCCCceEEECCCCCEEEEEeccC---CCceEEEEeCCCce
Confidence 4 2 1 5567889999999777765432 12367778877544
No 375
>PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A ....
Probab=91.45 E-value=0.87 Score=21.69 Aligned_cols=29 Identities=14% Similarity=0.297 Sum_probs=15.3
Q ss_pred CCCCEEEEEEccCCCEEEEEe-CC--CcEEEE
Q psy7062 56 VSKNVVEVGFQEDGKWMFTGG-ED--CRARIW 84 (148)
Q Consensus 56 ~~~~i~~~~~sp~~~~l~~~~-~~--~~i~l~ 84 (148)
....-....|+|||+.++-.+ .+ |...||
T Consensus 7 ~~~~~~~p~~SpDGk~i~f~s~~~~~g~~diy 38 (39)
T PF07676_consen 7 SPGDDGSPAWSPDGKYIYFTSNRNDRGSFDIY 38 (39)
T ss_dssp SSSSEEEEEE-TTSSEEEEEEECT--SSEEEE
T ss_pred CCccccCEEEecCCCEEEEEecCCCCCCcCEE
Confidence 344556677777777654433 33 444444
No 376
>PRK11138 outer membrane biogenesis protein BamB; Provisional
Probab=91.29 E-value=4.8 Score=29.98 Aligned_cols=97 Identities=11% Similarity=0.044 Sum_probs=55.5
Q ss_pred ccEEEEEecCCeEEEEeCCCCCCCceEEecCCCC--CEE-----EEEEcc--CCCEEEEEeCCCcEEEEECCcc---cc-
Q psy7062 25 VEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSK--NVV-----EVGFQE--DGKWMFTGGEDCRARIWDLSLC---FI- 91 (148)
Q Consensus 25 ~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~--~i~-----~~~~sp--~~~~l~~~~~~~~i~l~d~~~~---~~- 91 (148)
++.+++.+.++.+..+|.+++ +.+........ ... .+.-.| ++..++.++.++.+..+|..++ .+
T Consensus 69 ~~~vy~~~~~g~l~ald~~tG--~~~W~~~~~~~~~~~~~~~~~~~~~~~~v~~~~v~v~~~~g~l~ald~~tG~~~W~~ 146 (394)
T PRK11138 69 YNKVYAADRAGLVKALDADTG--KEIWSVDLSEKDGWFSKNKSALLSGGVTVAGGKVYIGSEKGQVYALNAEDGEVAWQT 146 (394)
T ss_pred CCEEEEECCCCeEEEEECCCC--cEeeEEcCCCcccccccccccccccccEEECCEEEEEcCCCEEEEEECCCCCCcccc
Confidence 456666678889999999998 66665442210 000 000011 3456667778899999999888 11
Q ss_pred ---ccceEEEEcc--CCCEEEEEecCCceecCeeEEEeecCCCcce
Q psy7062 92 ---QQVNALRITP--DKQLLASAEELSCCYCGAAVFVYNSCYPAAV 132 (148)
Q Consensus 92 ---~~i~~~~~sp--~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~ 132 (148)
..+.+ +| .+..++.+..++ .+.-+|..+.+..
T Consensus 147 ~~~~~~~s---sP~v~~~~v~v~~~~g------~l~ald~~tG~~~ 183 (394)
T PRK11138 147 KVAGEALS---RPVVSDGLVLVHTSNG------MLQALNESDGAVK 183 (394)
T ss_pred cCCCceec---CCEEECCEEEEECCCC------EEEEEEccCCCEe
Confidence 21111 12 234455555555 6676676655543
No 377
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=90.77 E-value=2.2 Score=31.32 Aligned_cols=72 Identities=11% Similarity=0.145 Sum_probs=47.1
Q ss_pred CcEEEEEeCCCCccEEEEEecCC----------eEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEE-EEe-CCCc
Q psy7062 13 GQISTVFDSKHLVEMVAALGGYQ----------HIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMF-TGG-EDCR 80 (148)
Q Consensus 13 ~~~~~~~~~~~~~~~l~~~~~d~----------~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~-~~~-~~~~ 80 (148)
|...+++++.. +.+.+. ...+ .|.++|++++ +.++.+.. ...+.+|.++.+.+.++ ..+ .++.
T Consensus 239 G~Q~~A~~~~~-~rlyvL-Mh~g~~gsHKdpgteVWv~D~~t~--krv~Ri~l-~~~~~Si~Vsqd~~P~L~~~~~~~~~ 313 (342)
T PF06433_consen 239 GWQLIAYHAAS-GRLYVL-MHQGGEGSHKDPGTEVWVYDLKTH--KRVARIPL-EHPIDSIAVSQDDKPLLYALSAGDGT 313 (342)
T ss_dssp SSS-EEEETTT-TEEEEE-EEE--TT-TTS-EEEEEEEETTTT--EEEEEEEE-EEEESEEEEESSSS-EEEEEETTTTE
T ss_pred ceeeeeecccc-CeEEEE-ecCCCCCCccCCceEEEEEECCCC--eEEEEEeC-CCccceEEEccCCCcEEEEEcCCCCe
Confidence 45567787653 344333 3222 5888899988 78887763 34567899999888544 333 4789
Q ss_pred EEEEECCcc
Q psy7062 81 ARIWDLSLC 89 (148)
Q Consensus 81 i~l~d~~~~ 89 (148)
+.+||..++
T Consensus 314 l~v~D~~tG 322 (342)
T PF06433_consen 314 LDVYDAATG 322 (342)
T ss_dssp EEEEETTT-
T ss_pred EEEEeCcCC
Confidence 999999988
No 378
>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates. The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.
Probab=90.46 E-value=2.4 Score=33.13 Aligned_cols=31 Identities=26% Similarity=0.479 Sum_probs=24.1
Q ss_pred CEEEEEEcc----CCCEEEEEeCCCcEEEEECCcc
Q psy7062 59 NVVEVGFQE----DGKWMFTGGEDCRARIWDLSLC 89 (148)
Q Consensus 59 ~i~~~~~sp----~~~~l~~~~~~~~i~l~d~~~~ 89 (148)
....++++. +..++++.+.|+++|+||+.++
T Consensus 216 ~~~~~~~~~~~~~~~~~l~tl~~D~~LRiW~l~t~ 250 (547)
T PF11715_consen 216 VAASLAVSSSEINDDTFLFTLSRDHTLRIWSLETG 250 (547)
T ss_dssp -EEEEEE-----ETTTEEEEEETTSEEEEEETTTT
T ss_pred ccceEEEecceeCCCCEEEEEeCCCeEEEEECCCC
Confidence 455666666 6779999999999999999887
No 379
>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin. These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus
Probab=90.37 E-value=3.7 Score=28.22 Aligned_cols=56 Identities=9% Similarity=0.279 Sum_probs=39.3
Q ss_pred EccCCCEEEEEeCCCcEEEEECCcc------------c--------c--ccceEEEEccCCCEEEEEecCCceecCeeEE
Q psy7062 65 FQEDGKWMFTGGEDCRARIWDLSLC------------F--------I--QQVNALRITPDKQLLASAEELSCCYCGAAVF 122 (148)
Q Consensus 65 ~sp~~~~l~~~~~~~~i~l~d~~~~------------~--------~--~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~ 122 (148)
+..++.+++..+.+|.+++||+++. + . ..|..+.++.+|.-+++-+. | ..+
T Consensus 18 l~~~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~lsn-g------~~y 90 (219)
T PF07569_consen 18 LECNGSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIVTLSN-G------DSY 90 (219)
T ss_pred EEeCCCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEEEEeC-C------CEE
Confidence 4567889999999999999999887 1 1 33566677777776655543 3 456
Q ss_pred EeecC
Q psy7062 123 VYNSC 127 (148)
Q Consensus 123 ~~d~~ 127 (148)
.||..
T Consensus 91 ~y~~~ 95 (219)
T PF07569_consen 91 SYSPD 95 (219)
T ss_pred Eeccc
Confidence 66644
No 380
>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []. Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.
Probab=89.93 E-value=5.2 Score=28.12 Aligned_cols=95 Identities=12% Similarity=0.126 Sum_probs=64.5
Q ss_pred cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCC-CCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc---
Q psy7062 14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGV-SKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC--- 89 (148)
Q Consensus 14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~-~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~--- 89 (148)
...++|+++. +.++++....+.|..++.+ + +.++.+.-. .....++.+..++.++++.-.++.+.++++...
T Consensus 24 ~SGLTy~pd~-~tLfaV~d~~~~i~els~~-G--~vlr~i~l~g~~D~EgI~y~g~~~~vl~~Er~~~L~~~~~~~~~~~ 99 (248)
T PF06977_consen 24 LSGLTYNPDT-GTLFAVQDEPGEIYELSLD-G--KVLRRIPLDGFGDYEGITYLGNGRYVLSEERDQRLYIFTIDDDTTS 99 (248)
T ss_dssp EEEEEEETTT-TEEEEEETTTTEEEEEETT-----EEEEEE-SS-SSEEEEEE-STTEEEEEETTTTEEEEEEE----TT
T ss_pred ccccEEcCCC-CeEEEEECCCCEEEEEcCC-C--CEEEEEeCCCCCCceeEEEECCCEEEEEEcCCCcEEEEEEeccccc
Confidence 6789999974 5677776677788777865 4 566666533 467899999988888887767899999888332
Q ss_pred --------cc--------ccceEEEEccCCCEEEEEecC
Q psy7062 90 --------FI--------QQVNALRITPDKQLLASAEEL 112 (148)
Q Consensus 90 --------~~--------~~i~~~~~sp~~~~l~~~~~d 112 (148)
+. ..+-.++|+|.++.|+.+-+.
T Consensus 100 ~~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE~ 138 (248)
T PF06977_consen 100 LDRADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAKER 138 (248)
T ss_dssp --EEEEEEEE---S---SS--EEEEEETTTTEEEEEEES
T ss_pred cchhhceEEecccccCCCcceEEEEEcCCCCEEEEEeCC
Confidence 11 446789999987777777553
No 381
>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3
Probab=89.93 E-value=3.2 Score=28.42 Aligned_cols=55 Identities=22% Similarity=0.271 Sum_probs=39.4
Q ss_pred CEEEEEeCCCcEEEEECCcc-------cc--ccceEEEEccCCCEEEEEecCCceecCeeEEEe
Q psy7062 70 KWMFTGGEDCRARIWDLSLC-------FI--QQVNALRITPDKQLLASAEELSCCYCGAAVFVY 124 (148)
Q Consensus 70 ~~l~~~~~~~~i~l~d~~~~-------~~--~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~ 124 (148)
..++.+...+.|.+|++... |. +.+..+.+++.|.+|++--++........+++|
T Consensus 29 d~Lfva~~g~~Vev~~l~~~~~~~~~~F~Tv~~V~~l~y~~~GDYlvTlE~k~~~~~~~fvR~Y 92 (215)
T PF14761_consen 29 DALFVAASGCKVEVYDLEQEECPLLCTFSTVGRVLQLVYSEAGDYLVTLEEKNKRSPVDFVRAY 92 (215)
T ss_pred ceEEEEcCCCEEEEEEcccCCCceeEEEcchhheeEEEeccccceEEEEEeecCCccceEEEEE
Confidence 45555566778999999843 44 889999999999999998765533322255554
No 382
>PRK13616 lipoprotein LpqB; Provisional
Probab=89.79 E-value=6.8 Score=31.22 Aligned_cols=53 Identities=9% Similarity=0.004 Sum_probs=34.9
Q ss_pred CCCEEEEEEccCCCEEEEEeCCCcEEE---EECCcc---c------c----ccceEEEEccCCCEEEEEec
Q psy7062 57 SKNVVEVGFQEDGKWMFTGGEDCRARI---WDLSLC---F------I----QQVNALRITPDKQLLASAEE 111 (148)
Q Consensus 57 ~~~i~~~~~sp~~~~l~~~~~~~~i~l---~d~~~~---~------~----~~i~~~~~sp~~~~l~~~~~ 111 (148)
...|..+.|||||+.++... ++.+.+ -....+ + . .....+.|.+++.++ .+..
T Consensus 447 ~g~Issl~wSpDG~RiA~i~-~g~v~Va~Vvr~~~G~~~l~~~~~l~~~l~~~~~~l~W~~~~~L~-V~~~ 515 (591)
T PRK13616 447 PGPISELQLSRDGVRAAMII-GGKVYLAVVEQTEDGQYALTNPREVGPGLGDTAVSLDWRTGDSLV-VGRS 515 (591)
T ss_pred CCCcCeEEECCCCCEEEEEE-CCEEEEEEEEeCCCCceeecccEEeecccCCccccceEecCCEEE-EEec
Confidence 45699999999999776654 456665 222222 2 1 335789999999855 4443
No 383
>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals. The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.
Probab=89.32 E-value=4.8 Score=30.35 Aligned_cols=82 Identities=10% Similarity=0.067 Sum_probs=45.8
Q ss_pred EEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEE-----ccCCCEEEEEeCCCcEEEEECCcc-------c----
Q psy7062 27 MVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGF-----QEDGKWMFTGGEDCRARIWDLSLC-------F---- 90 (148)
Q Consensus 27 ~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~-----sp~~~~l~~~~~~~~i~l~d~~~~-------~---- 90 (148)
+++. ..+..++++...+. +..............+.+ ...+..|+.-..+|.+++|.+... +
T Consensus 228 ~vVv-vSe~~irv~~~~~~--k~~~K~~~~~~~~~~~~vv~~~~~~~~~~Lv~l~~~G~i~i~SLP~Lkei~~~~l~~~~ 304 (395)
T PF08596_consen 228 YVVV-VSESDIRVFKPPKS--KGAHKSFDDPFLCSSASVVPTISRNGGYCLVCLFNNGSIRIYSLPSLKEIKSVSLPPPL 304 (395)
T ss_dssp EEEE-E-SSEEEEE-TT-----EEEEE-SS-EEEEEEEEEEEE-EEEEEEEEEEETTSEEEEEETTT--EEEEEE-SS--
T ss_pred EEEE-EcccceEEEeCCCC--cccceeeccccccceEEEEeecccCCceEEEEEECCCcEEEEECCCchHhhcccCCCcc
Confidence 4555 66789999999876 433332222223333444 235667788889999999999876 1
Q ss_pred c-ccceEEEEccCCCEEEEEec
Q psy7062 91 I-QQVNALRITPDKQLLASAEE 111 (148)
Q Consensus 91 ~-~~i~~~~~sp~~~~l~~~~~ 111 (148)
. ..+....++++|..+...+.
T Consensus 305 d~~~~~~ssis~~Gdi~~~~gp 326 (395)
T PF08596_consen 305 DSRRLSSSSISRNGDIFYWTGP 326 (395)
T ss_dssp -HHHHTT-EE-TTS-EEEE-SS
T ss_pred ccccccccEECCCCCEEEEeCc
Confidence 1 45666778889997776654
No 384
>KOG2114|consensus
Probab=89.18 E-value=12 Score=31.08 Aligned_cols=107 Identities=10% Similarity=0.032 Sum_probs=66.1
Q ss_pred EEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecC--CCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----
Q psy7062 16 STVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEG--VSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC---- 89 (148)
Q Consensus 16 ~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~--~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~---- 89 (148)
+++.+.+ -..+|.|-.+|.|..+.=+-...+-.+.-.. -...|+++.+..+++..+-......|.+|.+...
T Consensus 130 ~l~Vs~~--l~~Iv~Gf~nG~V~~~~GDi~RDrgsr~~~~~~~~~pITgL~~~~d~~s~lFv~Tt~~V~~y~l~gr~p~~ 207 (933)
T KOG2114|consen 130 SLAVSED--LKTIVCGFTNGLVICYKGDILRDRGSRQDYSHRGKEPITGLALRSDGKSVLFVATTEQVMLYSLSGRTPSL 207 (933)
T ss_pred EEEEEcc--ccEEEEEecCcEEEEEcCcchhccccceeeeccCCCCceeeEEecCCceeEEEEecceeEEEEecCCCcce
Confidence 4444444 5678888889988887443221111122112 3578999999999887444444556888888643
Q ss_pred --cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcc
Q psy7062 90 --FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAA 131 (148)
Q Consensus 90 --~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~ 131 (148)
+. ....|..+++....+++++.. .+.+||.....+
T Consensus 208 ~~ld~~G~~lnCss~~~~t~qfIca~~e-------~l~fY~sd~~~~ 247 (933)
T KOG2114|consen 208 KVLDNNGISLNCSSFSDGTYQFICAGSE-------FLYFYDSDGRGP 247 (933)
T ss_pred eeeccCCccceeeecCCCCccEEEecCc-------eEEEEcCCCcce
Confidence 11 667788888766645555432 589998764433
No 385
>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length. This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.
Probab=88.87 E-value=5.3 Score=32.00 Aligned_cols=61 Identities=21% Similarity=0.248 Sum_probs=42.7
Q ss_pred CEEEEEEccCCCEEEEEeCCCcEEEEECCcc-------cc--ccceEEEEc--cCCCEEEEEecCCceecCeeEEEee
Q psy7062 59 NVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-------FI--QQVNALRIT--PDKQLLASAEELSCCYCGAAVFVYN 125 (148)
Q Consensus 59 ~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-------~~--~~i~~~~~s--p~~~~l~~~~~d~~~~~~~~i~~~d 125 (148)
.+.-+.-|.-++..+..+....+.+||.+.. |. ..|..+.|. |+++.+++.+... .|.+|.
T Consensus 31 ~~~li~gss~~k~a~V~~~~~~LtIWD~~~~~lE~~~~f~~~~~I~dLDWtst~d~qsiLaVGf~~------~v~l~~ 102 (631)
T PF12234_consen 31 NPSLISGSSIKKIAVVDSSRSELTIWDTRSGVLEYEESFSEDDPIRDLDWTSTPDGQSILAVGFPH------HVLLYT 102 (631)
T ss_pred CcceEeecccCcEEEEECCCCEEEEEEcCCcEEEEeeeecCCCceeeceeeecCCCCEEEEEEcCc------EEEEEE
Confidence 3444444555555555555668999999988 32 789999996 5899888888755 566653
No 386
>PRK10115 protease 2; Provisional
Probab=88.86 E-value=4.1 Score=32.98 Aligned_cols=72 Identities=10% Similarity=-0.018 Sum_probs=48.3
Q ss_pred CCEEEEEEccCCCEEEEEe-CC----CcEEEEECCcc--cc----ccceEEEEccCCCEEEEEecCCceecCeeEEEeec
Q psy7062 58 KNVVEVGFQEDGKWMFTGG-ED----CRARIWDLSLC--FI----QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNS 126 (148)
Q Consensus 58 ~~i~~~~~sp~~~~l~~~~-~~----~~i~l~d~~~~--~~----~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~ 126 (148)
-.+..+.++|||++++.+. .+ ..+++.|+.++ +. ..-..++|++|++.|+.+..+........|+.+++
T Consensus 127 ~~l~~~~~Spdg~~la~~~d~~G~E~~~l~v~d~~tg~~l~~~i~~~~~~~~w~~D~~~~~y~~~~~~~~~~~~v~~h~l 206 (686)
T PRK10115 127 YTLGGMAITPDNTIMALAEDFLSRRQYGIRFRNLETGNWYPELLDNVEPSFVWANDSWTFYYVRKHPVTLLPYQVWRHTI 206 (686)
T ss_pred EEEeEEEECCCCCEEEEEecCCCcEEEEEEEEECCCCCCCCccccCcceEEEEeeCCCEEEEEEecCCCCCCCEEEEEEC
Confidence 3467788999999776542 22 36888999877 22 21246899999987776665432113357888888
Q ss_pred CCC
Q psy7062 127 CYP 129 (148)
Q Consensus 127 ~~~ 129 (148)
-++
T Consensus 207 gt~ 209 (686)
T PRK10115 207 GTP 209 (686)
T ss_pred CCC
Confidence 776
No 387
>KOG4460|consensus
Probab=88.71 E-value=10 Score=29.85 Aligned_cols=69 Identities=13% Similarity=0.072 Sum_probs=46.3
Q ss_pred CEEEEEEccCCCEEEEEeCCCcEEEEECCcc------------------------cc----ccceEEEEccCC---CEEE
Q psy7062 59 NVVEVGFQEDGKWMFTGGEDCRARIWDLSLC------------------------FI----QQVNALRITPDK---QLLA 107 (148)
Q Consensus 59 ~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~------------------------~~----~~i~~~~~sp~~---~~l~ 107 (148)
.|..+..++.|..++-.+.+|.+.++=.+.. |. --+..++|+|+. ..|.
T Consensus 105 eV~~vl~s~~GS~VaL~G~~Gi~vMeLp~rwG~~s~~eDgk~~v~CRt~~i~~~~ftss~~ltl~Qa~WHP~S~~D~hL~ 184 (741)
T KOG4460|consen 105 EVYQVLLSPTGSHVALIGIKGLMVMELPKRWGKNSEFEDGKSTVNCRTTPVAERFFTSSTSLTLKQAAWHPSSILDPHLV 184 (741)
T ss_pred EEEEEEecCCCceEEEecCCeeEEEEchhhcCccceecCCCceEEEEeecccceeeccCCceeeeeccccCCccCCceEE
Confidence 4677888999998888888886555442111 11 234557899965 4555
Q ss_pred EEecCCceecCeeEEEeecCCCccee
Q psy7062 108 SAEELSCCYCGAAVFVYNSCYPAAVV 133 (148)
Q Consensus 108 ~~~~d~~~~~~~~i~~~d~~~~~~~~ 133 (148)
.-+.|. .+++||+..++...
T Consensus 185 iL~sdn------viRiy~lS~~tely 204 (741)
T KOG4460|consen 185 LLTSDN------VIRIYSLSEPTELY 204 (741)
T ss_pred EEecCc------EEEEEecCCcchhh
Confidence 555555 89999998776653
No 388
>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea. The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.
Probab=88.54 E-value=9.4 Score=29.24 Aligned_cols=92 Identities=12% Similarity=0.125 Sum_probs=50.0
Q ss_pred CeEEEEeCCCCCCCceEEecCCC--CCEEEEEEccC--CCE-EEEEeCCCcEEEEEC-Ccc---------cc--------
Q psy7062 35 QHIRMYDFGSNNPNPVINCEGVS--KNVVEVGFQED--GKW-MFTGGEDCRARIWDL-SLC---------FI-------- 91 (148)
Q Consensus 35 ~~v~~~d~~~~~~~~~~~~~~~~--~~i~~~~~sp~--~~~-l~~~~~~~~i~l~d~-~~~---------~~-------- 91 (148)
+++.+||++.. +.+.++.--. .....+.|..+ ..+ ++.+...+.|..|-- ..+ +.
T Consensus 222 ~~l~vWD~~~r--~~~Q~idLg~~g~~pLEvRflH~P~~~~gFvg~aLss~i~~~~k~~~g~W~a~kVi~ip~~~v~~~~ 299 (461)
T PF05694_consen 222 HSLHVWDWSTR--KLLQTIDLGEEGQMPLEVRFLHDPDANYGFVGCALSSSIWRFYKDDDGEWAAEKVIDIPAKKVEGWI 299 (461)
T ss_dssp -EEEEEETTTT--EEEEEEES-TTEEEEEEEEE-SSTT--EEEEEEE--EEEEEEEE-ETTEEEEEEEEEE--EE--SS-
T ss_pred CeEEEEECCCC--cEeeEEecCCCCCceEEEEecCCCCccceEEEEeccceEEEEEEcCCCCeeeeEEEECCCcccCccc
Confidence 47999999998 7777765322 34566777544 443 344445555555533 222 00
Q ss_pred ------------ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCccee
Q psy7062 92 ------------QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVV 133 (148)
Q Consensus 92 ------------~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~ 133 (148)
.-+..+..|.|.++|..++. ..+.|+.||++.+..+.
T Consensus 300 lp~ml~~~~~~P~LitDI~iSlDDrfLYvs~W-----~~GdvrqYDISDP~~Pk 348 (461)
T PF05694_consen 300 LPEMLKPFGAVPPLITDILISLDDRFLYVSNW-----LHGDVRQYDISDPFNPK 348 (461)
T ss_dssp --GGGGGG-EE------EEE-TTS-EEEEEET-----TTTEEEEEE-SSTTS-E
T ss_pred ccccccccccCCCceEeEEEccCCCEEEEEcc-----cCCcEEEEecCCCCCCc
Confidence 23577888999998888875 23489999999876544
No 389
>KOG1916|consensus
Probab=88.53 E-value=1.4 Score=36.54 Aligned_cols=80 Identities=13% Similarity=0.145 Sum_probs=52.1
Q ss_pred CeEEEEeCCCCCCCceEE-----ecCCCCCEEEEEEcc---CCCEEEEEeCCCcEEEEECCcc-----------------
Q psy7062 35 QHIRMYDFGSNNPNPVIN-----CEGVSKNVVEVGFQE---DGKWMFTGGEDCRARIWDLSLC----------------- 89 (148)
Q Consensus 35 ~~v~~~d~~~~~~~~~~~-----~~~~~~~i~~~~~sp---~~~~l~~~~~~~~i~l~d~~~~----------------- 89 (148)
|.+.+||++.-.++.+.. .......+.-+.|+| +..++..+..++++++..+...
T Consensus 153 g~lfVy~vd~l~G~iq~~l~v~~~~p~gs~~~~V~wcp~~~~~~~ic~~~~~~~i~lL~~~ra~~~l~rsHs~~~~d~a~ 232 (1283)
T KOG1916|consen 153 GELFVYDVDVLQGEIQPQLEVTPITPYGSDPQLVSWCPIAVNKVYICYGLKGGEIRLLNINRALRSLFRSHSQRVTDMAF 232 (1283)
T ss_pred hhhheeehHhhccccccceEEeecCcCCCCcceeeecccccccceeeeccCCCceeEeeechHHHHHHHhcCCCcccHHH
Confidence 578888886432233222 222345566777776 5567777888899998888654
Q ss_pred cc-ccceEEEEccCCCEEEEEecCCc
Q psy7062 90 FI-QQVNALRITPDKQLLASAEELSC 114 (148)
Q Consensus 90 ~~-~~i~~~~~sp~~~~l~~~~~d~~ 114 (148)
|. +-+.--..+|||..++.++.||.
T Consensus 233 ~~~g~~~l~~lSpDGtv~a~a~~dG~ 258 (1283)
T KOG1916|consen 233 FAEGVLKLASLSPDGTVFAWAISDGS 258 (1283)
T ss_pred HhhchhhheeeCCCCcEEEEeecCCc
Confidence 22 22222347999999999999993
No 390
>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases. The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....
Probab=88.28 E-value=8.2 Score=28.23 Aligned_cols=99 Identities=18% Similarity=0.175 Sum_probs=55.1
Q ss_pred cCcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEec----CCCCCEEEEEEccC----CCEEEEEeCC-----
Q psy7062 12 FGQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCE----GVSKNVVEVGFQED----GKWMFTGGED----- 78 (148)
Q Consensus 12 ~~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~----~~~~~i~~~~~sp~----~~~l~~~~~~----- 78 (148)
..+..++|.|+ +.++++ ...|.|++++........+.... ........++++|+ +...+..+..
T Consensus 2 ~~P~~~a~~pd--G~l~v~-e~~G~i~~~~~~g~~~~~v~~~~~v~~~~~~gllgia~~p~f~~n~~lYv~~t~~~~~~~ 78 (331)
T PF07995_consen 2 NNPRSMAFLPD--GRLLVA-ERSGRIWVVDKDGSLKTPVADLPEVFADGERGLLGIAFHPDFASNGYLYVYYTNADEDGG 78 (331)
T ss_dssp SSEEEEEEETT--SCEEEE-ETTTEEEEEETTTEECEEEEE-TTTBTSTTBSEEEEEE-TTCCCC-EEEEEEEEE-TSSS
T ss_pred CCceEEEEeCC--CcEEEE-eCCceEEEEeCCCcCcceecccccccccccCCcccceeccccCCCCEEEEEEEcccCCCC
Confidence 34678899998 889888 77999999993322001222221 23456899999994 4433333321
Q ss_pred ---CcEEEEECCcc----------cc---------ccceEEEEccCCCEEEEEecCC
Q psy7062 79 ---CRARIWDLSLC----------FI---------QQVNALRITPDKQLLASAEELS 113 (148)
Q Consensus 79 ---~~i~l~d~~~~----------~~---------~~i~~~~~sp~~~~l~~~~~d~ 113 (148)
..|.-|..... +. +....+.|.|||.+.++.+..+
T Consensus 79 ~~~~~v~r~~~~~~~~~~~~~~~l~~~~p~~~~~~H~g~~l~fgpDG~LYvs~G~~~ 135 (331)
T PF07995_consen 79 DNDNRVVRFTLSDGDGDLSSEEVLVTGLPDTSSGNHNGGGLAFGPDGKLYVSVGDGG 135 (331)
T ss_dssp SEEEEEEEEEEETTSCEEEEEEEEEEEEES-CSSSS-EEEEEE-TTSEEEEEEB-TT
T ss_pred CcceeeEEEeccCCccccccceEEEEEeCCCCCCCCCCccccCCCCCcEEEEeCCCC
Confidence 12333322211 11 5567799999998766666544
No 391
>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation. It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.
Probab=88.12 E-value=7.1 Score=27.36 Aligned_cols=103 Identities=18% Similarity=0.153 Sum_probs=62.0
Q ss_pred cEEEEEeCCCCccEEEEEe---cCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEE-CCcc
Q psy7062 14 QISTVFDSKHLVEMVAALG---GYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWD-LSLC 89 (148)
Q Consensus 14 ~~~~~~~~~~~~~~l~~~~---~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d-~~~~ 89 (148)
....+.+++ ++.++... ....+.++..... ...... ...+..-.|++++........+...+++. ...+
T Consensus 26 ~~s~AvS~d--g~~~A~v~~~~~~~~L~~~~~~~~---~~~~~~--g~~l~~PS~d~~g~~W~v~~~~~~~~~~~~~~~g 98 (253)
T PF10647_consen 26 VTSPAVSPD--GSRVAAVSEGDGGRSLYVGPAGGP---VRPVLT--GGSLTRPSWDPDGWVWTVDDGSGGVRVVRDSASG 98 (253)
T ss_pred ccceEECCC--CCeEEEEEEcCCCCEEEEEcCCCc---ceeecc--CCccccccccCCCCEEEEEcCCCceEEEEecCCC
Confidence 456677777 55554434 2235666555433 222222 33677789999988777766666666663 2222
Q ss_pred ------cc-----ccceEEEEccCCCEEEEEecCCceecCeeEEEeec
Q psy7062 90 ------FI-----QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNS 126 (148)
Q Consensus 90 ------~~-----~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~ 126 (148)
.. ..|..+.+||||..++....++ ...+|.+--+
T Consensus 99 ~~~~~~v~~~~~~~~I~~l~vSpDG~RvA~v~~~~---~~~~v~va~V 143 (253)
T PF10647_consen 99 TGEPVEVDWPGLRGRITALRVSPDGTRVAVVVEDG---GGGRVYVAGV 143 (253)
T ss_pred cceeEEecccccCCceEEEEECCCCcEEEEEEecC---CCCeEEEEEE
Confidence 11 3799999999999888877433 2335665543
No 392
>PF01436 NHL: NHL repeat; InterPro: IPR001258 The NHL repeat, named after NCL-1, HT2A and Lin-41, is found largely in a large number of eukaryotic and prokaryotic proteins. For example, the repeat is found in a variety of enzymes of the copper type II, ascorbate-dependent monooxygenase family which catalyse the C terminus alpha-amidation of biological peptides []. In many it occurs in tandem arrays, for example in the ringfinger beta-box, coiled-coil (RBCC) eukaryotic growth regulators []. The 'Brain Tumor' protein (Brat) is one such growth regulator that contains a 6-bladed NHL-repeat beta-propeller [, ]. The NHL repeats are also found in serine/threonine protein kinase (STPK) in diverse range of pathogenic bacteria. These STPK are transmembrane receptors with a intracellular N-terminal kinase domain and extracellular C-terminal sensor domain. In the STPK, PknD, from Mycobacterium tuberculosis, the sensor domain forms a rigid, six-bladed b-propeller composed of NHL repeats with a flexible tether to the transmembrane domain.; GO: 0005515 protein binding; PDB: 3FVZ_A 3FW0_A 1RWL_A 1RWI_A 1Q7F_A.
Probab=87.76 E-value=1.6 Score=19.35 Aligned_cols=25 Identities=16% Similarity=0.334 Sum_probs=16.1
Q ss_pred EEEEEEccCCCEEEEEeCCCcEEEE
Q psy7062 60 VVEVGFQEDGKWMFTGGEDCRARIW 84 (148)
Q Consensus 60 i~~~~~sp~~~~l~~~~~~~~i~l~ 84 (148)
..+++++++|..+++-+..+.|++|
T Consensus 4 P~gvav~~~g~i~VaD~~n~rV~vf 28 (28)
T PF01436_consen 4 PHGVAVDSDGNIYVADSGNHRVQVF 28 (28)
T ss_dssp EEEEEEETTSEEEEEECCCTEEEEE
T ss_pred CcEEEEeCCCCEEEEECCCCEEEEC
Confidence 4566677777766666666666554
No 393
>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain. All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.
Probab=87.37 E-value=9.1 Score=28.38 Aligned_cols=53 Identities=9% Similarity=0.084 Sum_probs=34.5
Q ss_pred CCEEEEEEccCCCEEEEEeCC-------------------CcEEEEECCcc-cc------ccceEEEEccCCCEEEEEe
Q psy7062 58 KNVVEVGFQEDGKWMFTGGED-------------------CRARIWDLSLC-FI------QQVNALRITPDKQLLASAE 110 (148)
Q Consensus 58 ~~i~~~~~sp~~~~l~~~~~~-------------------~~i~l~d~~~~-~~------~~i~~~~~sp~~~~l~~~~ 110 (148)
.....+.|.|||.+.++.+.. +.+.-+|.... ++ ...+.++|+|+|+.+++-.
T Consensus 124 ~~~~~l~~gpDG~LYv~~G~~~~~~~~~~~~~~~~~~~~~g~i~r~~pdg~~~e~~a~G~rnp~Gl~~d~~G~l~~tdn 202 (367)
T TIGR02604 124 HSLNSLAWGPDGWLYFNHGNTLASKVTRPGTSDESRQGLGGGLFRYNPDGGKLRVVAHGFQNPYGHSVDSWGDVFFCDN 202 (367)
T ss_pred ccccCceECCCCCEEEecccCCCceeccCCCccCcccccCceEEEEecCCCeEEEEecCcCCCccceECCCCCEEEEcc
Confidence 346789999999866654311 34555555443 22 4467899999998876644
No 394
>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals. The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.
Probab=86.99 E-value=9.6 Score=28.77 Aligned_cols=36 Identities=25% Similarity=0.257 Sum_probs=27.0
Q ss_pred ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceec
Q psy7062 92 QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVA 134 (148)
Q Consensus 92 ~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~ 134 (148)
+++.+++.| |--+++.|..+| .+.+.|+|.+..+..
T Consensus 87 g~vtal~~S-~iGFvaigy~~G------~l~viD~RGPavI~~ 122 (395)
T PF08596_consen 87 GPVTALKNS-DIGFVAIGYESG------SLVVIDLRGPAVIYN 122 (395)
T ss_dssp -SEEEEEE--BTSEEEEEETTS------EEEEEETTTTEEEEE
T ss_pred CcEeEEecC-CCcEEEEEecCC------cEEEEECCCCeEEee
Confidence 677777764 667888888877 999999997776543
No 395
>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase. These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity
Probab=86.93 E-value=8.5 Score=26.92 Aligned_cols=62 Identities=10% Similarity=0.120 Sum_probs=43.2
Q ss_pred CCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc
Q psy7062 23 HLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC 89 (148)
Q Consensus 23 ~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~ 89 (148)
..++.|+.|+++| +.+++.... ....... +...|..+...|+-+.++.-+ |+.+.++++...
T Consensus 5 ~~~~~L~vGt~~G-l~~~~~~~~-~~~~~i~--~~~~I~ql~vl~~~~~llvLs-d~~l~~~~L~~l 66 (275)
T PF00780_consen 5 SWGDRLLVGTEDG-LYVYDLSDP-SKPTRIL--KLSSITQLSVLPELNLLLVLS-DGQLYVYDLDSL 66 (275)
T ss_pred cCCCEEEEEECCC-EEEEEecCC-ccceeEe--ecceEEEEEEecccCEEEEEc-CCccEEEEchhh
Confidence 3477888888888 888888433 1233333 233399999999887766654 499999999765
No 396
>PHA02713 hypothetical protein; Provisional
Probab=86.91 E-value=12 Score=29.50 Aligned_cols=102 Identities=13% Similarity=0.094 Sum_probs=52.6
Q ss_pred ccEEEEEecCC-----eEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCC---------------------
Q psy7062 25 VEMVAALGGYQ-----HIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGED--------------------- 78 (148)
Q Consensus 25 ~~~l~~~~~d~-----~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~--------------------- 78 (148)
+.+.+.|+.++ ++..||..+.....+..+.........+ .-+|+..+.|+.+
T Consensus 352 g~IYviGG~~~~~~~~sve~Ydp~~~~W~~~~~mp~~r~~~~~~--~~~g~IYviGG~~~~~~~~~~~~~~~~~~~~~~~ 429 (557)
T PHA02713 352 DTIYAIGGQNGTNVERTIECYTMGDDKWKMLPDMPIALSSYGMC--VLDQYIYIIGGRTEHIDYTSVHHMNSIDMEEDTH 429 (557)
T ss_pred CEEEEECCcCCCCCCceEEEEECCCCeEEECCCCCcccccccEE--EECCEEEEEeCCCccccccccccccccccccccc
Confidence 55666666543 5888998876222222222111112122 2367777777654
Q ss_pred --CcEEEEECCcc-------cc-ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCC
Q psy7062 79 --CRARIWDLSLC-------FI-QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCY 128 (148)
Q Consensus 79 --~~i~l~d~~~~-------~~-~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~ 128 (148)
..+..||..+. +. .+.......-+++..+.|+.++.......+..||..+
T Consensus 430 ~~~~ve~YDP~td~W~~v~~m~~~r~~~~~~~~~~~IYv~GG~~~~~~~~~~ve~Ydp~~ 489 (557)
T PHA02713 430 SSNKVIRYDTVNNIWETLPNFWTGTIRPGVVSHKDDIYVVCDIKDEKNVKTCIFRYNTNT 489 (557)
T ss_pred ccceEEEECCCCCeEeecCCCCcccccCcEEEECCEEEEEeCCCCCCccceeEEEecCCC
Confidence 24777888765 11 2222222233677667776543111123467888886
No 397
>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2.3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.
Probab=86.84 E-value=9.1 Score=27.20 Aligned_cols=98 Identities=11% Similarity=0.083 Sum_probs=56.0
Q ss_pred ccEEEEEecCC--eEEEEeCCCCCCCceEEecCC-CCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----cc--ccc
Q psy7062 25 VEMVAALGGYQ--HIRMYDFGSNNPNPVINCEGV-SKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-----FI--QQV 94 (148)
Q Consensus 25 ~~~l~~~~~d~--~v~~~d~~~~~~~~~~~~~~~-~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-----~~--~~i 94 (148)
+.++-+.+..| .++.+|++++ +.+....-. .-.=.++....|.-+.+ .=.++...+||..+. |. ..-
T Consensus 56 g~LyESTG~yG~S~l~~~d~~tg--~~~~~~~l~~~~FgEGit~~~d~l~qL-TWk~~~~f~yd~~tl~~~~~~~y~~EG 132 (264)
T PF05096_consen 56 GTLYESTGLYGQSSLRKVDLETG--KVLQSVPLPPRYFGEGITILGDKLYQL-TWKEGTGFVYDPNTLKKIGTFPYPGEG 132 (264)
T ss_dssp TEEEEEECSTTEEEEEEEETTTS--SEEEEEE-TTT--EEEEEEETTEEEEE-ESSSSEEEEEETTTTEEEEEEE-SSS-
T ss_pred CEEEEeCCCCCcEEEEEEECCCC--cEEEEEECCccccceeEEEECCEEEEE-EecCCeEEEEccccceEEEEEecCCcc
Confidence 56666656555 7999999998 555443321 22223444433322222 235788999999876 33 556
Q ss_pred eEEEEccCCCEEEEEecCCceecCeeEEEeecCCCccee
Q psy7062 95 NALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVV 133 (148)
Q Consensus 95 ~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~ 133 (148)
+.++ .+++.|+.+.. ..+++++|..+.+...
T Consensus 133 WGLt--~dg~~Li~SDG------S~~L~~~dP~~f~~~~ 163 (264)
T PF05096_consen 133 WGLT--SDGKRLIMSDG------SSRLYFLDPETFKEVR 163 (264)
T ss_dssp -EEE--ECSSCEEEE-S------SSEEEEE-TTT-SEEE
T ss_pred eEEE--cCCCEEEEECC------ccceEEECCcccceEE
Confidence 6676 46777777654 3489999987665443
No 398
>COG3391 Uncharacterized conserved protein [Function unknown]
Probab=86.79 E-value=11 Score=28.13 Aligned_cols=107 Identities=12% Similarity=0.177 Sum_probs=71.1
Q ss_pred EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeC---CCcEEEEECCcc--
Q psy7062 15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGE---DCRARIWDLSLC-- 89 (148)
Q Consensus 15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~---~~~i~l~d~~~~-- 89 (148)
...+.++.. .+..+....++.+.+.|..+. ....... -......++++|+++.+..+.. ++++.+.|-.+.
T Consensus 77 ~~i~v~~~~-~~vyv~~~~~~~v~vid~~~~--~~~~~~~-vG~~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~~~ 152 (381)
T COG3391 77 AGVAVNPAG-NKVYVTTGDSNTVSVIDTATN--TVLGSIP-VGLGPVGLAVDPDGKYVYVANAGNGNNTVSVIDAATNKV 152 (381)
T ss_pred cceeeCCCC-CeEEEecCCCCeEEEEcCccc--ceeeEee-eccCCceEEECCCCCEEEEEecccCCceEEEEeCCCCeE
Confidence 445555552 334555455678999997776 4444433 2336778999999987766554 678888888876
Q ss_pred c---c--ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062 90 F---I--QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA 130 (148)
Q Consensus 90 ~---~--~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~ 130 (148)
. . .....++++|+|..+..+..+ .+.|.+.|.....
T Consensus 153 ~~~~~vG~~P~~~a~~p~g~~vyv~~~~-----~~~v~vi~~~~~~ 193 (381)
T COG3391 153 TATIPVGNTPTGVAVDPDGNKVYVTNSD-----DNTVSVIDTSGNS 193 (381)
T ss_pred EEEEecCCCcceEEECCCCCeEEEEecC-----CCeEEEEeCCCcc
Confidence 1 1 234889999999977777631 3378888865443
No 399
>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=86.18 E-value=11 Score=27.39 Aligned_cols=88 Identities=17% Similarity=0.148 Sum_probs=59.2
Q ss_pred EEeCCCCccEEEEEecC------CeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeC--------------
Q psy7062 18 VFDSKHLVEMVAALGGY------QHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGE-------------- 77 (148)
Q Consensus 18 ~~~~~~~~~~l~~~~~d------~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~-------------- 77 (148)
+|+++ |.+|+. +++ |.|=+||.+.+ -..+..+.+|.-..-.+.|.+||+.++.+.-
T Consensus 120 vfs~d--G~~LYA-TEndfd~~rGViGvYd~r~~-fqrvgE~~t~GiGpHev~lm~DGrtlvvanGGIethpdfgR~~lN 195 (366)
T COG3490 120 VFSPD--GRLLYA-TENDFDPNRGVIGVYDAREG-FQRVGEFSTHGIGPHEVTLMADGRTLVVANGGIETHPDFGRTELN 195 (366)
T ss_pred ccCCC--CcEEEe-ecCCCCCCCceEEEEecccc-cceecccccCCcCcceeEEecCCcEEEEeCCceecccccCccccc
Confidence 34565 777777 443 36899999865 3667788888877778899999998877642
Q ss_pred ----CCcEEEEECCcc-------cc-----ccceEEEEccCCCEEEEE
Q psy7062 78 ----DCRARIWDLSLC-------FI-----QQVNALRITPDKQLLASA 109 (148)
Q Consensus 78 ----~~~i~l~d~~~~-------~~-----~~i~~~~~sp~~~~l~~~ 109 (148)
...+-+.|..++ +. -.++.++..+||..++.+
T Consensus 196 ldsMePSlvlld~atG~liekh~Lp~~l~~lSiRHld~g~dgtvwfgc 243 (366)
T COG3490 196 LDSMEPSLVLLDAATGNLIEKHTLPASLRQLSIRHLDIGRDGTVWFGC 243 (366)
T ss_pred hhhcCccEEEEeccccchhhhccCchhhhhcceeeeeeCCCCcEEEEE
Confidence 112444553333 11 567778888888766554
No 400
>KOG4441|consensus
Probab=85.98 E-value=16 Score=29.09 Aligned_cols=103 Identities=16% Similarity=0.064 Sum_probs=62.7
Q ss_pred ccEEEEEecCC-----eEEEEeCCCCCCCceEEecCCCCCEEEEEEc-cCCCEEEEEeCCC------cEEEEECCcc---
Q psy7062 25 VEMVAALGGYQ-----HIRMYDFGSNNPNPVINCEGVSKNVVEVGFQ-EDGKWMFTGGEDC------RARIWDLSLC--- 89 (148)
Q Consensus 25 ~~~l~~~~~d~-----~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~s-p~~~~l~~~~~~~------~i~l~d~~~~--- 89 (148)
|.+.|+|+.|+ ++..||..+.....+..+. . ...+.+.. -+|+..+.|+.++ .+..||..+.
T Consensus 381 g~iYavGG~dg~~~l~svE~YDp~~~~W~~va~m~--~-~r~~~gv~~~~g~iYi~GG~~~~~~~l~sve~YDP~t~~W~ 457 (571)
T KOG4441|consen 381 GKLYAVGGFDGEKSLNSVECYDPVTNKWTPVAPML--T-RRSGHGVAVLGGKLYIIGGGDGSSNCLNSVECYDPETNTWT 457 (571)
T ss_pred CEEEEEeccccccccccEEEecCCCCcccccCCCC--c-ceeeeEEEEECCEEEEEcCcCCCccccceEEEEcCCCCcee
Confidence 67788888886 5889999887333333332 2 33344433 3788888887553 5778888776
Q ss_pred -cc----ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcc
Q psy7062 90 -FI----QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAA 131 (148)
Q Consensus 90 -~~----~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~ 131 (148)
.. .+...-.-.-++...+.|+.|+ -....+|..||..+.+.
T Consensus 458 ~~~~M~~~R~~~g~a~~~~~iYvvGG~~~-~~~~~~VE~ydp~~~~W 503 (571)
T KOG4441|consen 458 LIAPMNTRRSGFGVAVLNGKIYVVGGFDG-TSALSSVERYDPETNQW 503 (571)
T ss_pred ecCCcccccccceEEEECCEEEEECCccC-CCccceEEEEcCCCCce
Confidence 11 1111112223788888888777 22234588898876543
No 401
>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex. Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm
Probab=85.97 E-value=13 Score=28.15 Aligned_cols=48 Identities=21% Similarity=0.355 Sum_probs=35.5
Q ss_pred eEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECC
Q psy7062 36 HIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLS 87 (148)
Q Consensus 36 ~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~ 87 (148)
.|.+|+.... .+..+.-....+.++.|+.+.. |+....||.+++||+.
T Consensus 62 ~I~iys~sG~---ll~~i~w~~~~iv~~~wt~~e~-LvvV~~dG~v~vy~~~ 109 (410)
T PF04841_consen 62 SIQIYSSSGK---LLSSIPWDSGRIVGMGWTDDEE-LVVVQSDGTVRVYDLF 109 (410)
T ss_pred EEEEECCCCC---EeEEEEECCCCEEEEEECCCCe-EEEEEcCCEEEEEeCC
Confidence 5888888764 5555443337899999988655 5566689999999995
No 402
>PHA02713 hypothetical protein; Provisional
Probab=85.97 E-value=7.9 Score=30.55 Aligned_cols=88 Identities=8% Similarity=-0.099 Sum_probs=48.4
Q ss_pred eEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCC------CcEEEEECCc-c-------cc---ccceEEE
Q psy7062 36 HIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGED------CRARIWDLSL-C-------FI---QQVNALR 98 (148)
Q Consensus 36 ~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~------~~i~l~d~~~-~-------~~---~~i~~~~ 98 (148)
++..||.++.....+..+. ......-...-+++..+.|+.+ ..+..||..+ . +. .....+.
T Consensus 433 ~ve~YDP~td~W~~v~~m~--~~r~~~~~~~~~~~IYv~GG~~~~~~~~~~ve~Ydp~~~~~W~~~~~m~~~r~~~~~~~ 510 (557)
T PHA02713 433 KVIRYDTVNNIWETLPNFW--TGTIRPGVVSHKDDIYVVCDIKDEKNVKTCIFRYNTNTYNGWELITTTESRLSALHTIL 510 (557)
T ss_pred eEEEECCCCCeEeecCCCC--cccccCcEEEECCEEEEEeCCCCCCccceeEEEecCCCCCCeeEccccCcccccceeEE
Confidence 5778888776323233322 1111111223356766666654 2467899987 4 11 1122222
Q ss_pred EccCCCEEEEEecCCceecCeeEEEeecCCCcc
Q psy7062 99 ITPDKQLLASAEELSCCYCGAAVFVYNSCYPAA 131 (148)
Q Consensus 99 ~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~ 131 (148)
-+++..+.|+.++ ...+..||+.+.+.
T Consensus 511 --~~~~iyv~Gg~~~----~~~~e~yd~~~~~W 537 (557)
T PHA02713 511 --HDNTIMMLHCYES----YMLQDTFNVYTYEW 537 (557)
T ss_pred --ECCEEEEEeeecc----eeehhhcCcccccc
Confidence 2888888888776 23677888876553
No 403
>KOG4499|consensus
Probab=85.93 E-value=4.4 Score=28.44 Aligned_cols=48 Identities=8% Similarity=0.059 Sum_probs=38.3
Q ss_pred EEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEcc
Q psy7062 16 STVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQE 67 (148)
Q Consensus 16 ~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp 67 (148)
..+.|.. |++.++.-+.++|..+|..++ +.+.++.-.+..|++++|--
T Consensus 216 Gm~ID~e--G~L~Va~~ng~~V~~~dp~tG--K~L~eiklPt~qitsccFgG 263 (310)
T KOG4499|consen 216 GMTIDTE--GNLYVATFNGGTVQKVDPTTG--KILLEIKLPTPQITSCCFGG 263 (310)
T ss_pred cceEccC--CcEEEEEecCcEEEEECCCCC--cEEEEEEcCCCceEEEEecC
Confidence 3444554 888888788889999999999 88888887788999999853
No 404
>PF15390 DUF4613: Domain of unknown function (DUF4613)
Probab=85.91 E-value=16 Score=29.14 Aligned_cols=72 Identities=13% Similarity=0.180 Sum_probs=47.7
Q ss_pred cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCC-CcEEEEECCc
Q psy7062 14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGED-CRARIWDLSL 88 (148)
Q Consensus 14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~-~~i~l~d~~~ 88 (148)
+..+.|+|. ..+|++-.....-.++++.....+....+. ..+.|-+.+|.+||.-++.+-.. =..++||-..
T Consensus 115 pQGCVWHPk--~~iL~VLT~~dvSV~~sV~~d~srVkaDi~-~~G~IhCACWT~DG~RLVVAvGSsLHSyiWd~~q 187 (671)
T PF15390_consen 115 PQGCVWHPK--KAILTVLTARDVSVLPSVHCDSSRVKADIK-TSGLIHCACWTKDGQRLVVAVGSSLHSYIWDSAQ 187 (671)
T ss_pred CCcccccCC--CceEEEEecCceeEeeeeeeCCceEEEecc-CCceEEEEEecCcCCEEEEEeCCeEEEEEecCch
Confidence 467889998 677777666555566677655324444453 56789999999999866555433 3455777643
No 405
>KOG4499|consensus
Probab=85.25 E-value=11 Score=26.60 Aligned_cols=95 Identities=9% Similarity=0.069 Sum_probs=58.2
Q ss_pred EEEEEeCCCCccEEEEEecCCeEEEEeC--CCCCC---CceEEecC----CCCCEEEEEEccCCCEEEEEeCCCcEEEEE
Q psy7062 15 ISTVFDSKHLVEMVAALGGYQHIRMYDF--GSNNP---NPVINCEG----VSKNVVEVGFQEDGKWMFTGGEDCRARIWD 85 (148)
Q Consensus 15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~--~~~~~---~~~~~~~~----~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d 85 (148)
+.++||.+. ..+.+.-+.+-+|.-||. .++.. +.+..++. .....-++++.-+|+..+++=..+++...|
T Consensus 161 Ngl~Wd~d~-K~fY~iDsln~~V~a~dyd~~tG~~snr~~i~dlrk~~~~e~~~PDGm~ID~eG~L~Va~~ng~~V~~~d 239 (310)
T KOG4499|consen 161 NGLAWDSDA-KKFYYIDSLNYEVDAYDYDCPTGDLSNRKVIFDLRKSQPFESLEPDGMTIDTEGNLYVATFNGGTVQKVD 239 (310)
T ss_pred ccccccccC-cEEEEEccCceEEeeeecCCCcccccCcceeEEeccCCCcCCCCCCcceEccCCcEEEEEecCcEEEEEC
Confidence 577788654 455555466668888884 44321 22222222 122233455566788877777788999999
Q ss_pred CCcc-------cc-ccceEEEEc-cCCCEEEEEe
Q psy7062 86 LSLC-------FI-QQVNALRIT-PDKQLLASAE 110 (148)
Q Consensus 86 ~~~~-------~~-~~i~~~~~s-p~~~~l~~~~ 110 (148)
..++ +. .++.+.+|- |+-..+.+..
T Consensus 240 p~tGK~L~eiklPt~qitsccFgGkn~d~~yvT~ 273 (310)
T KOG4499|consen 240 PTTGKILLEIKLPTPQITSCCFGGKNLDILYVTT 273 (310)
T ss_pred CCCCcEEEEEEcCCCceEEEEecCCCccEEEEEe
Confidence 9988 22 778999985 3444444443
No 406
>COG4590 ABC-type uncharacterized transport system, permease component [General function prediction only]
Probab=84.96 E-value=13 Score=28.81 Aligned_cols=99 Identities=9% Similarity=0.047 Sum_probs=61.4
Q ss_pred EEEEEecCCeEEEE-eCCCCCCCc---eEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----cc---ccce
Q psy7062 27 MVAALGGYQHIRMY-DFGSNNPNP---VINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC----FI---QQVN 95 (148)
Q Consensus 27 ~l~~~~~d~~v~~~-d~~~~~~~~---~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~----~~---~~i~ 95 (148)
-|.+...||-+..| |++....+. ++.++-....+..+.-..+.+.+++-+.+|++.++..... ++ ..+.
T Consensus 282 SLLv~~~dG~vsQWFdvr~~~~p~l~h~R~f~l~pa~~~~l~pe~~rkgF~~l~~~G~L~~f~st~~~~lL~~~~~~~~~ 361 (733)
T COG4590 282 SLLVVHEDGLVSQWFDVRRDGQPHLNHIRNFKLAPAEVQFLLPETNRKGFYSLYRNGTLQSFYSTSEKLLLFERAYQAPQ 361 (733)
T ss_pred eEEEEcCCCceeeeeeeecCCCCcceeeeccccCcccceeeccccccceEEEEcCCCceeeeecccCcceehhhhhcCcc
Confidence 34455888888777 554331122 2333323344544433344567788888899988876554 22 6778
Q ss_pred EEEEccCCCEEEEEecCCceecCeeEEEeecCCCcce
Q psy7062 96 ALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAV 132 (148)
Q Consensus 96 ~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~ 132 (148)
.+++||.+.++++-.. ++++++.+.++.+.
T Consensus 362 ~~~~Sp~~~~Ll~e~~-------gki~~~~l~Nr~Pe 391 (733)
T COG4590 362 LVAMSPNQAYLLSEDQ-------GKIRLAQLENRNPE 391 (733)
T ss_pred eeeeCcccchheeecC-------CceEEEEecCCCCC
Confidence 8899999988876543 25888777665543
No 407
>PF12768 Rax2: Cortical protein marker for cell polarity
Probab=84.83 E-value=12 Score=26.83 Aligned_cols=88 Identities=15% Similarity=0.225 Sum_probs=54.6
Q ss_pred eEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEe------CCCcEEEEECCcc-c---c--------ccceEE
Q psy7062 36 HIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGG------EDCRARIWDLSLC-F---I--------QQVNAL 97 (148)
Q Consensus 36 ~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~------~~~~i~l~d~~~~-~---~--------~~i~~~ 97 (148)
.+.+||..+. +-...-.+-.+.|..+.|..+.+.++.|. ....+-.||+.+. + . .++..+
T Consensus 17 ~lC~yd~~~~--qW~~~g~~i~G~V~~l~~~~~~~Llv~G~ft~~~~~~~~la~yd~~~~~w~~~~~~~s~~ipgpv~a~ 94 (281)
T PF12768_consen 17 GLCLYDTDNS--QWSSPGNGISGTVTDLQWASNNQLLVGGNFTLNGTNSSNLATYDFKNQTWSSLGGGSSNSIPGPVTAL 94 (281)
T ss_pred EEEEEECCCC--EeecCCCCceEEEEEEEEecCCEEEEEEeeEECCCCceeEEEEecCCCeeeecCCcccccCCCcEEEE
Confidence 6889999876 43333334567899999987777777775 2346778998877 2 1 456666
Q ss_pred EEcc-CCCEEEEEecCCceecCeeEEEeecC
Q psy7062 98 RITP-DKQLLASAEELSCCYCGAAVFVYNSC 127 (148)
Q Consensus 98 ~~sp-~~~~l~~~~~d~~~~~~~~i~~~d~~ 127 (148)
.+.. ++..+..++.- ..+...|..||-.
T Consensus 95 ~~~~~d~~~~~~aG~~--~~g~~~l~~~dGs 123 (281)
T PF12768_consen 95 TFISNDGSNFWVAGRS--ANGSTFLMKYDGS 123 (281)
T ss_pred EeeccCCceEEEecee--cCCCceEEEEcCC
Confidence 6643 55444433321 1234567788733
No 408
>KOG3630|consensus
Probab=84.80 E-value=6.8 Score=33.52 Aligned_cols=89 Identities=9% Similarity=0.015 Sum_probs=57.5
Q ss_pred ecCCeEEEEeCCCCCCCc---eEEecCC------CCCEEEEEEccCCC-EEEEEeCCCcEEEEECCcc------cc--cc
Q psy7062 32 GGYQHIRMYDFGSNNPNP---VINCEGV------SKNVVEVGFQEDGK-WMFTGGEDCRARIWDLSLC------FI--QQ 93 (148)
Q Consensus 32 ~~d~~v~~~d~~~~~~~~---~~~~~~~------~~~i~~~~~sp~~~-~l~~~~~~~~i~l~d~~~~------~~--~~ 93 (148)
+++..|..||++.-.... -..+..| .....++.|+|.-- ..+.+..|..|++..+.-. +. ..
T Consensus 121 sng~~v~~fD~~~fs~s~~~~~~pl~~s~ts~ek~vf~~~~~wnP~vp~n~av~l~dlsl~V~~~~~~~~~v~s~p~t~~ 200 (1405)
T KOG3630|consen 121 SNGEAVYSFDLEEFSESRYETTVPLKNSATSFEKPVFQLKNVWNPLVPLNSAVDLSDLSLRVKSTKQLAQNVTSFPVTNS 200 (1405)
T ss_pred cCCceEEEEehHhhhhhhhhhccccccccchhccccccccccccCCccchhhhhccccchhhhhhhhhhhhhcccCcccc
Confidence 343478889997542111 1111111 23456778888644 4566677888888777544 22 67
Q ss_pred ceEEEEccCCCEEEEEecCCceecCeeEEEeec
Q psy7062 94 VNALRITPDKQLLASAEELSCCYCGAAVFVYNS 126 (148)
Q Consensus 94 i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~ 126 (148)
..+++|+|.|++++.|-..| ++.-|..
T Consensus 201 ~Tav~WSprGKQl~iG~nnG------t~vQy~P 227 (1405)
T KOG3630|consen 201 QTAVLWSPRGKQLFIGRNNG------TEVQYEP 227 (1405)
T ss_pred eeeEEeccccceeeEecCCC------eEEEeec
Confidence 89999999999999998877 6665553
No 409
>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]
Probab=84.06 E-value=14 Score=29.09 Aligned_cols=53 Identities=6% Similarity=0.152 Sum_probs=41.1
Q ss_pred CCCEEEEEeCCCcEEEEECCcc-----cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecC
Q psy7062 68 DGKWMFTGGEDCRARIWDLSLC-----FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSC 127 (148)
Q Consensus 68 ~~~~l~~~~~~~~i~l~d~~~~-----~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~ 127 (148)
..-+++.++..|-|++||--.. ++ ..|-.+..+.+|.++++.+. ..+.+.|++
T Consensus 572 esGyIa~as~kGDirLyDRig~rAKtalP~lG~aIk~idvta~Gk~ilaTCk-------~yllL~d~~ 632 (776)
T COG5167 572 ESGYIAAASRKGDIRLYDRIGKRAKTALPGLGDAIKHIDVTANGKHILATCK-------NYLLLTDVP 632 (776)
T ss_pred cCceEEEecCCCceeeehhhcchhhhcCcccccceeeeEeecCCcEEEEeec-------ceEEEEecc
Confidence 3458999999999999997543 33 77888999999999888875 147777755
No 410
>COG5276 Uncharacterized conserved protein [Function unknown]
Probab=83.95 E-value=14 Score=26.90 Aligned_cols=104 Identities=15% Similarity=0.130 Sum_probs=63.8
Q ss_pred eCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----cc----
Q psy7062 20 DSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC----FI---- 91 (148)
Q Consensus 20 ~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~----~~---- 91 (148)
|..-.+++...+..+.-++++|+.++....+..+.....-. -.|.-.|++...+.++.-+-+.|+.+. +.
T Consensus 91 Dv~vse~yvyvad~ssGL~IvDIS~P~sP~~~~~lnt~gya--ygv~vsGn~aYVadlddgfLivdvsdpssP~lagrya 168 (370)
T COG5276 91 DVRVSEEYVYVADWSSGLRIVDISTPDSPTLIGFLNTDGYA--YGVYVSGNYAYVADLDDGFLIVDVSDPSSPQLAGRYA 168 (370)
T ss_pred eeEecccEEEEEcCCCceEEEeccCCCCcceeccccCCceE--EEEEecCCEEEEeeccCcEEEEECCCCCCceeeeeec
Confidence 33344677777677778999999987322333222222222 344557999999998888889999766 22
Q ss_pred ---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCccee
Q psy7062 92 ---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVV 133 (148)
Q Consensus 92 ---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~ 133 (148)
...+.++. .|++-..+..|+ =+.+.|+.++..+.
T Consensus 169 ~~~~d~~~v~I--SGn~AYvA~~d~------GL~ivDVSnp~sPv 205 (370)
T COG5276 169 LPGGDTHDVAI--SGNYAYVAWRDG------GLTIVDVSNPHSPV 205 (370)
T ss_pred cCCCCceeEEE--ecCeEEEEEeCC------CeEEEEccCCCCCe
Confidence 22345555 344444454544 47788887776554
No 411
>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea. The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.
Probab=82.94 E-value=7.2 Score=29.83 Aligned_cols=54 Identities=11% Similarity=0.216 Sum_probs=30.6
Q ss_pred CCCEEEEEEccCCCEEEEEeC-CCcEEEEECCcc----cc-----------------------ccceEEEEccCCCEEEE
Q psy7062 57 SKNVVEVGFQEDGKWMFTGGE-DCRARIWDLSLC----FI-----------------------QQVNALRITPDKQLLAS 108 (148)
Q Consensus 57 ~~~i~~~~~sp~~~~l~~~~~-~~~i~l~d~~~~----~~-----------------------~~i~~~~~sp~~~~l~~ 108 (148)
..-|+.|.+|.|.++|...++ .|.++.||+... +. +..+-+..|-||+.|..
T Consensus 311 P~LitDI~iSlDDrfLYvs~W~~GdvrqYDISDP~~Pkl~gqv~lGG~~~~~~~~~v~g~~l~GgPqMvqlS~DGkRlYv 390 (461)
T PF05694_consen 311 PPLITDILISLDDRFLYVSNWLHGDVRQYDISDPFNPKLVGQVFLGGSIRKGDHPVVKGKRLRGGPQMVQLSLDGKRLYV 390 (461)
T ss_dssp ------EEE-TTS-EEEEEETTTTEEEEEE-SSTTS-EEEEEEE-BTTTT-B--TTS------S----EEE-TTSSEEEE
T ss_pred CCceEeEEEccCCCEEEEEcccCCcEEEEecCCCCCCcEEeEEEECcEeccCCCccccccccCCCCCeEEEccCCeEEEE
Confidence 355899999999999988777 689999999776 11 22366777888887666
Q ss_pred Ee
Q psy7062 109 AE 110 (148)
Q Consensus 109 ~~ 110 (148)
++
T Consensus 391 Tn 392 (461)
T PF05694_consen 391 TN 392 (461)
T ss_dssp E-
T ss_pred Ee
Confidence 54
No 412
>PF03088 Str_synth: Strictosidine synthase; InterPro: IPR018119 This entry represents a conserved region found in strictosidine synthase (4.3.3.2 from EC), a key enzyme in alkaloid biosynthesis. It catalyses the Pictet-Spengler stereospecific condensation of tryptamine with secologanin to form strictosidine []. The structure of the native enzyme from the Indian medicinal plant Rauvolfia serpentina (Serpentwood) (Devilpepper) represents the first example of a six-bladed four-stranded beta-propeller fold from the plant kingdom [].; GO: 0016844 strictosidine synthase activity, 0009058 biosynthetic process; PDB: 2FPB_A 2V91_B 2FP8_A 3V1S_B 2FPC_A 2VAQ_A 2FP9_B.
Probab=82.32 E-value=5.7 Score=23.22 Aligned_cols=40 Identities=10% Similarity=0.091 Sum_probs=21.8
Q ss_pred cCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEE
Q psy7062 33 GYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTG 75 (148)
Q Consensus 33 ~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~ 75 (148)
.+|.+..||..++ +....+. -=...+++++++|+..++.+
T Consensus 35 ~~GRll~ydp~t~--~~~vl~~-~L~fpNGVals~d~~~vlv~ 74 (89)
T PF03088_consen 35 PTGRLLRYDPSTK--ETTVLLD-GLYFPNGVALSPDESFVLVA 74 (89)
T ss_dssp --EEEEEEETTTT--EEEEEEE-EESSEEEEEE-TTSSEEEEE
T ss_pred CCcCEEEEECCCC--eEEEehh-CCCccCeEEEcCCCCEEEEE
Confidence 3456777777776 3222222 23356777888888766554
No 413
>PHA03098 kelch-like protein; Provisional
Probab=82.22 E-value=22 Score=27.74 Aligned_cols=103 Identities=13% Similarity=-0.016 Sum_probs=50.5
Q ss_pred ccEEEEEecCC------eEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCC-----CcEEEEECCcc----
Q psy7062 25 VEMVAALGGYQ------HIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGED-----CRARIWDLSLC---- 89 (148)
Q Consensus 25 ~~~l~~~~~d~------~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~-----~~i~l~d~~~~---- 89 (148)
+.+++.|+.++ .+..||..+.....+..+........ ...-+++.++.|+.+ ..+..||..+.
T Consensus 295 ~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~R~~~~--~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~ 372 (534)
T PHA03098 295 NVIYFIGGMNKNNLSVNSVVSYDTKTKSWNKVPELIYPRKNPG--VTVFNNRIYVIGGIYNSISLNTVESWKPGESKWRE 372 (534)
T ss_pred CEEEEECCCcCCCCeeccEEEEeCCCCeeeECCCCCcccccce--EEEECCEEEEEeCCCCCEecceEEEEcCCCCceee
Confidence 45566655432 57778887762111111111111222 223367777777765 34777888765
Q ss_pred ---cc-ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCC
Q psy7062 90 ---FI-QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYP 129 (148)
Q Consensus 90 ---~~-~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~ 129 (148)
+. .+.......-+++..+.|+.+........+..||+.+.
T Consensus 373 ~~~lp~~r~~~~~~~~~~~iYv~GG~~~~~~~~~~v~~yd~~t~ 416 (534)
T PHA03098 373 EPPLIFPRYNPCVVNVNNLIYVIGGISKNDELLKTVECFSLNTN 416 (534)
T ss_pred CCCcCcCCccceEEEECCEEEEECCcCCCCcccceEEEEeCCCC
Confidence 11 11111122236676676664321111246788887654
No 414
>PF03088 Str_synth: Strictosidine synthase; InterPro: IPR018119 This entry represents a conserved region found in strictosidine synthase (4.3.3.2 from EC), a key enzyme in alkaloid biosynthesis. It catalyses the Pictet-Spengler stereospecific condensation of tryptamine with secologanin to form strictosidine []. The structure of the native enzyme from the Indian medicinal plant Rauvolfia serpentina (Serpentwood) (Devilpepper) represents the first example of a six-bladed four-stranded beta-propeller fold from the plant kingdom [].; GO: 0016844 strictosidine synthase activity, 0009058 biosynthetic process; PDB: 2FPB_A 2V91_B 2FP8_A 3V1S_B 2FPC_A 2VAQ_A 2FP9_B.
Probab=81.93 E-value=8 Score=22.58 Aligned_cols=35 Identities=23% Similarity=0.231 Sum_probs=24.8
Q ss_pred CCCcEEEEECCcc----c-c--ccceEEEEccCCCEEEEEec
Q psy7062 77 EDCRARIWDLSLC----F-I--QQVNALRITPDKQLLASAEE 111 (148)
Q Consensus 77 ~~~~i~l~d~~~~----~-~--~~i~~~~~sp~~~~l~~~~~ 111 (148)
.+|.+.-||..+. + . .-.+.+++++|+.+++.+-.
T Consensus 35 ~~GRll~ydp~t~~~~vl~~~L~fpNGVals~d~~~vlv~Et 76 (89)
T PF03088_consen 35 PTGRLLRYDPSTKETTVLLDGLYFPNGVALSPDESFVLVAET 76 (89)
T ss_dssp --EEEEEEETTTTEEEEEEEEESSEEEEEE-TTSSEEEEEEG
T ss_pred CCcCEEEEECCCCeEEEehhCCCccCeEEEcCCCCEEEEEec
Confidence 4567888888877 2 2 66788999999998888764
No 415
>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]
Probab=81.78 E-value=18 Score=26.38 Aligned_cols=40 Identities=20% Similarity=0.224 Sum_probs=29.2
Q ss_pred CceEEecCCCCCEEEEEEccCCCEEEEEe-CCCcEEEEECC
Q psy7062 48 NPVINCEGVSKNVVEVGFQEDGKWMFTGG-EDCRARIWDLS 87 (148)
Q Consensus 48 ~~~~~~~~~~~~i~~~~~sp~~~~l~~~~-~~~~i~l~d~~ 87 (148)
..++....+-...++++||||++.++... ..+.++-|++.
T Consensus 153 ~~~~l~~~~~~~~NGla~SpDg~tly~aDT~~~~i~r~~~d 193 (307)
T COG3386 153 GVVRLLDDDLTIPNGLAFSPDGKTLYVADTPANRIHRYDLD 193 (307)
T ss_pred CEEEeecCcEEecCceEECCCCCEEEEEeCCCCeEEEEecC
Confidence 45555555566678999999998776654 45888888886
No 416
>PF10214 Rrn6: RNA polymerase I-specific transcription-initiation factor; InterPro: IPR019350 RNA polymerase I-specific transcription-initiation factor Rrn6 and Rrn7 represent components of a multisubunit transcription factor essential for the initiation of rDNA transcription by Pol I []. These proteins are found in fungi.
Probab=81.63 E-value=29 Score=28.72 Aligned_cols=107 Identities=7% Similarity=0.144 Sum_probs=68.8
Q ss_pred CcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCC---ceEEecCC----------CCCEEEEEEccCCCEEEEEeCCC
Q psy7062 13 GQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPN---PVINCEGV----------SKNVVEVGFQEDGKWMFTGGEDC 79 (148)
Q Consensus 13 ~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~---~~~~~~~~----------~~~i~~~~~sp~~~~l~~~~~~~ 79 (148)
.+..++|+|...+++ |.....|...+|++...+.. .......+ ......+.|.++-..++.++..
T Consensus 147 ~~aDv~FnP~~~~q~-AiVD~~G~Wsvw~i~~~~~~~~~~~~~~~~~~gsi~~d~~e~s~w~rI~W~~~~~~lLv~~r~- 224 (765)
T PF10214_consen 147 PHADVAFNPWDQRQF-AIVDEKGNWSVWDIKGRPKRKSSNLRLSRNISGSIIFDPEELSNWKRILWVSDSNRLLVCNRS- 224 (765)
T ss_pred ccceEEeccCccceE-EEEeccCcEEEEEeccccccCCcceeeccCCCccccCCCcccCcceeeEecCCCCEEEEEcCC-
Confidence 467899998765655 55599999999999221101 11111111 1334577888887777777644
Q ss_pred cEEEEECCcc-----cc-----ccceEEEEccC--CCEEEEEecCCceecCeeEEEeecCCC
Q psy7062 80 RARIWDLSLC-----FI-----QQVNALRITPD--KQLLASAEELSCCYCGAAVFVYNSCYP 129 (148)
Q Consensus 80 ~i~l~d~~~~-----~~-----~~i~~~~~sp~--~~~l~~~~~d~~~~~~~~i~~~d~~~~ 129 (148)
.+.++|+++. +. .+|..+.-+|. ...++.++. .|...|+...
T Consensus 225 ~l~~~d~~~~~~~~~l~~~~~~~~IlDv~~~~~~~~~~FiLTs~--------eiiw~~~~~~ 278 (765)
T PF10214_consen 225 KLMLIDFESNWQTEYLVTAKTWSWILDVKRSPDNPSHVFILTSK--------EIIWLDVKSS 278 (765)
T ss_pred ceEEEECCCCCccchhccCCChhheeeEEecCCccceEEEEecC--------eEEEEEccCC
Confidence 6888899876 11 77888888876 455555554 6777787763
No 417
>PRK10115 protease 2; Provisional
Probab=81.14 E-value=28 Score=28.36 Aligned_cols=100 Identities=7% Similarity=0.038 Sum_probs=56.7
Q ss_pred EEEeCCCCccEEEEEecCC-----eEEEEeCCCCCCCceE-EecCCCCCEEEEEEccCCCEEEEEeCC------CcEEEE
Q psy7062 17 TVFDSKHLVEMVAALGGYQ-----HIRMYDFGSNNPNPVI-NCEGVSKNVVEVGFQEDGKWMFTGGED------CRARIW 84 (148)
Q Consensus 17 ~~~~~~~~~~~l~~~~~d~-----~v~~~d~~~~~~~~~~-~~~~~~~~i~~~~~sp~~~~l~~~~~~------~~i~l~ 84 (148)
+.++|+ +++|+.+.+.+ .+.+.|+.++ ..+. .+. ... ..++|.+|++.++....+ ..++.+
T Consensus 132 ~~~Spd--g~~la~~~d~~G~E~~~l~v~d~~tg--~~l~~~i~-~~~--~~~~w~~D~~~~~y~~~~~~~~~~~~v~~h 204 (686)
T PRK10115 132 MAITPD--NTIMALAEDFLSRRQYGIRFRNLETG--NWYPELLD-NVE--PSFVWANDSWTFYYVRKHPVTLLPYQVWRH 204 (686)
T ss_pred EEECCC--CCEEEEEecCCCcEEEEEEEEECCCC--CCCCcccc-Ccc--eEEEEeeCCCEEEEEEecCCCCCCCEEEEE
Confidence 344455 77777643332 5888899877 4322 222 111 568999999866554432 357778
Q ss_pred ECCcc-------cc---ccceEEEEcc-CCCEEEEEecCCceecCeeEEEeec
Q psy7062 85 DLSLC-------FI---QQVNALRITP-DKQLLASAEELSCCYCGAAVFVYNS 126 (148)
Q Consensus 85 d~~~~-------~~---~~i~~~~~sp-~~~~l~~~~~d~~~~~~~~i~~~d~ 126 (148)
++.+. +. ....-..+.+ ++++++..+..+ ....+.+++.
T Consensus 205 ~lgt~~~~d~lv~~e~~~~~~~~~~~s~d~~~l~i~~~~~---~~~~~~l~~~ 254 (686)
T PRK10115 205 TIGTPASQDELVYEEKDDTFYVSLHKTTSKHYVVIHLASA---TTSEVLLLDA 254 (686)
T ss_pred ECCCChhHCeEEEeeCCCCEEEEEEEcCCCCEEEEEEECC---ccccEEEEEC
Confidence 88766 22 2222223334 788766555433 2335777774
No 418
>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain. All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.
Probab=80.53 E-value=21 Score=26.47 Aligned_cols=96 Identities=16% Similarity=0.074 Sum_probs=54.9
Q ss_pred ecCcEEEEEeCCCCccEEEEEe-----------cCC-eEEEEeCCCCCCC--ceEEecCCCCCEEEEEEccCCCEEEEEe
Q psy7062 11 AFGQISTVFDSKHLVEMVAALG-----------GYQ-HIRMYDFGSNNPN--PVINCEGVSKNVVEVGFQEDGKWMFTGG 76 (148)
Q Consensus 11 ~~~~~~~~~~~~~~~~~l~~~~-----------~d~-~v~~~d~~~~~~~--~~~~~~~~~~~i~~~~~sp~~~~l~~~~ 76 (148)
+..+..++|+++ |+++++-. ..+ .|.+++-..+..+ ....+...-....++++.++| .++ ++
T Consensus 13 ~~~P~~ia~d~~--G~l~V~e~~~y~~~~~~~~~~~~rI~~l~d~dgdG~~d~~~vfa~~l~~p~Gi~~~~~G-lyV-~~ 88 (367)
T TIGR02604 13 LRNPIAVCFDER--GRLWVAEGITYSRPAGRQGPLGDRILILEDADGDGKYDKSNVFAEELSMVTGLAVAVGG-VYV-AT 88 (367)
T ss_pred cCCCceeeECCC--CCEEEEeCCcCCCCCCCCCCCCCEEEEEEcCCCCCCcceeEEeecCCCCccceeEecCC-EEE-eC
Confidence 456788899988 88887732 112 6666654322112 233443334456888999988 444 44
Q ss_pred CCCcEEEEECCc------c-------cc-------ccceEEEEccCCCEEEEEe
Q psy7062 77 EDCRARIWDLSL------C-------FI-------QQVNALRITPDKQLLASAE 110 (148)
Q Consensus 77 ~~~~i~l~d~~~------~-------~~-------~~i~~~~~sp~~~~l~~~~ 110 (148)
.....++.|... . +. .....+.|.|||.+.++-+
T Consensus 89 ~~~i~~~~d~~gdg~ad~~~~~l~~~~~~~~~~~~~~~~~l~~gpDG~LYv~~G 142 (367)
T TIGR02604 89 PPDILFLRDKDGDDKADGEREVLLSGFGGQINNHHHSLNSLAWGPDGWLYFNHG 142 (367)
T ss_pred CCeEEEEeCCCCCCCCCCccEEEEEccCCCCCcccccccCceECCCCCEEEecc
Confidence 443333445422 1 11 2266789999998766554
No 419
>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []. RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].
Probab=80.34 E-value=31 Score=28.31 Aligned_cols=105 Identities=7% Similarity=0.098 Sum_probs=66.6
Q ss_pred EEEEEeCCCCccEEEEEecCCeEEEEeCCCC------------------CCCceEEecCCCCCEEEEEEc--cCCCEEEE
Q psy7062 15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSN------------------NPNPVINCEGVSKNVVEVGFQ--EDGKWMFT 74 (148)
Q Consensus 15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~------------------~~~~~~~~~~~~~~i~~~~~s--p~~~~l~~ 74 (148)
+-....--...+.|+.+.+||.|.+|.+++- ..++...+. ......+++++ ...++++.
T Consensus 104 N~i~v~~lg~~EVLl~c~DdG~V~~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~~~-v~~SaWGLdIh~~~~~rlIAV 182 (717)
T PF08728_consen 104 NFIKVGDLGGEEVLLLCTDDGDVLAYYTETIIEAIERFSEDNDSGFSRLKIKPFFHLR-VGASAWGLDIHDYKKSRLIAV 182 (717)
T ss_pred eEEEecccCCeeEEEEEecCCeEEEEEHHHHHHHHHhhccccccccccccCCCCeEee-cCCceeEEEEEecCcceEEEE
Confidence 3334444445788999899999999976310 001112222 24567899998 77788899
Q ss_pred EeCCCcEEEEECCc--c-------cc--ccceEEEEccCC-----C-EEEEEecCCceecCeeEEEeec
Q psy7062 75 GGEDCRARIWDLSL--C-------FI--QQVNALRITPDK-----Q-LLASAEELSCCYCGAAVFVYNS 126 (148)
Q Consensus 75 ~~~~~~i~l~d~~~--~-------~~--~~i~~~~~sp~~-----~-~l~~~~~d~~~~~~~~i~~~d~ 126 (148)
+++...|-+|-... . .. +.|.++.|-++. . ++++++=.| .+.+|++
T Consensus 183 SsNs~~VTVFaf~l~~~r~~~~~s~~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G------~v~~~~I 245 (717)
T PF08728_consen 183 SSNSQEVTVFAFALVDERFYHVPSHQHSHNIPNVSFLDDDLDPNGHVKVVATDISG------EVWTFKI 245 (717)
T ss_pred ecCCceEEEEEEeccccccccccccccccCCCeeEeecCCCCCccceEEEEEeccC------cEEEEEE
Confidence 88888777665433 1 11 789999997632 2 566666545 5666665
No 420
>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A.
Probab=80.33 E-value=20 Score=26.08 Aligned_cols=66 Identities=14% Similarity=0.253 Sum_probs=39.5
Q ss_pred ecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----cc----ccceEEEEccCCCEEEEEecCCceecCeeEEEe
Q psy7062 53 CEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC----FI----QQVNALRITPDKQLLASAEELSCCYCGAAVFVY 124 (148)
Q Consensus 53 ~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~----~~----~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~ 124 (148)
.......+..+.-++||++++.+.......-||--.. .. .++.++.|.|++...+.+ +.+ .|++-
T Consensus 140 ~~~~~gs~~~~~r~~dG~~vavs~~G~~~~s~~~G~~~w~~~~r~~~~riq~~gf~~~~~lw~~~-~Gg------~~~~s 212 (302)
T PF14870_consen 140 VSETSGSINDITRSSDGRYVAVSSRGNFYSSWDPGQTTWQPHNRNSSRRIQSMGFSPDGNLWMLA-RGG------QIQFS 212 (302)
T ss_dssp E-S----EEEEEE-TTS-EEEEETTSSEEEEE-TT-SS-EEEE--SSS-EEEEEE-TTS-EEEEE-TTT------EEEEE
T ss_pred ccCCcceeEeEEECCCCcEEEEECcccEEEEecCCCccceEEccCccceehhceecCCCCEEEEe-CCc------EEEEc
Confidence 3334566888888999999998887777778887543 11 889999999998876655 544 56555
Q ss_pred e
Q psy7062 125 N 125 (148)
Q Consensus 125 d 125 (148)
+
T Consensus 213 ~ 213 (302)
T PF14870_consen 213 D 213 (302)
T ss_dssp E
T ss_pred c
Confidence 5
No 421
>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []. Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.
Probab=79.69 E-value=19 Score=25.39 Aligned_cols=70 Identities=9% Similarity=0.090 Sum_probs=42.7
Q ss_pred EecCCCCCEEEEEEccCCC-EEEEEeCCCcEEEEECCcc------cc--ccceEEEEccCCCEEEEEecCCceecCeeEE
Q psy7062 52 NCEGVSKNVVEVGFQEDGK-WMFTGGEDCRARIWDLSLC------FI--QQVNALRITPDKQLLASAEELSCCYCGAAVF 122 (148)
Q Consensus 52 ~~~~~~~~i~~~~~sp~~~-~l~~~~~~~~i~l~d~~~~------~~--~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~ 122 (148)
.+.+-...+.++.|+|+.+ .+++....+.|.-++.... |. +-.-.+++..++.++++.-+++ .+.
T Consensus 16 ~l~g~~~e~SGLTy~pd~~tLfaV~d~~~~i~els~~G~vlr~i~l~g~~D~EgI~y~g~~~~vl~~Er~~------~L~ 89 (248)
T PF06977_consen 16 PLPGILDELSGLTYNPDTGTLFAVQDEPGEIYELSLDGKVLRRIPLDGFGDYEGITYLGNGRYVLSEERDQ------RLY 89 (248)
T ss_dssp E-TT--S-EEEEEEETTTTEEEEEETTTTEEEEEETT--EEEEEE-SS-SSEEEEEE-STTEEEEEETTTT------EEE
T ss_pred ECCCccCCccccEEcCCCCeEEEEECCCCEEEEEcCCCCEEEEEeCCCCCCceeEEEECCCEEEEEEcCCC------cEE
Confidence 4445556799999999766 5566677788888887533 22 4456677766776666554444 777
Q ss_pred EeecC
Q psy7062 123 VYNSC 127 (148)
Q Consensus 123 ~~d~~ 127 (148)
++++.
T Consensus 90 ~~~~~ 94 (248)
T PF06977_consen 90 IFTID 94 (248)
T ss_dssp EEEE-
T ss_pred EEEEe
Confidence 77764
No 422
>PHA03098 kelch-like protein; Provisional
Probab=79.03 E-value=28 Score=27.10 Aligned_cols=103 Identities=11% Similarity=0.031 Sum_probs=52.4
Q ss_pred ccEEEEEecC------CeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCC--------CcEEEEECCcc-
Q psy7062 25 VEMVAALGGY------QHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGED--------CRARIWDLSLC- 89 (148)
Q Consensus 25 ~~~l~~~~~d------~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~--------~~i~l~d~~~~- 89 (148)
+.+.+.|+.+ +.+..||+.+.....+..+....... .+...+++.++.|+.+ ..+..||..+.
T Consensus 390 ~~iYv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~--~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~ 467 (534)
T PHA03098 390 NLIYVIGGISKNDELLKTVECFSLNTNKWSKGSPLPISHYGG--CAIYHDGKIYVIGGISYIDNIKVYNIVESYNPVTNK 467 (534)
T ss_pred CEEEEECCcCCCCcccceEEEEeCCCCeeeecCCCCccccCc--eEEEECCEEEEECCccCCCCCcccceEEEecCCCCc
Confidence 5566665522 35888898875222222222111111 1233456666666543 23788898776
Q ss_pred ---cc----ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062 90 ---FI----QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA 130 (148)
Q Consensus 90 ---~~----~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~ 130 (148)
+. .+.......-+++.++.|+.++.. ....+..||..+.+
T Consensus 468 W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~-~~~~v~~yd~~~~~ 514 (534)
T PHA03098 468 WTELSSLNFPRINASLCIFNNKIYVVGGDKYEY-YINEIEVYDDKTNT 514 (534)
T ss_pred eeeCCCCCcccccceEEEECCEEEEEcCCcCCc-ccceeEEEeCCCCE
Confidence 11 111111122367777777654321 12468889877554
No 423
>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates. The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.
Probab=79.02 E-value=7.3 Score=30.46 Aligned_cols=26 Identities=8% Similarity=0.220 Sum_probs=21.6
Q ss_pred ccEEEEEecCCeEEEEeCCCCCCCceEE
Q psy7062 25 VEMVAALGGYQHIRMYDFGSNNPNPVIN 52 (148)
Q Consensus 25 ~~~l~~~~~d~~v~~~d~~~~~~~~~~~ 52 (148)
..++++.+.|+++|+||++++ ..+.+
T Consensus 230 ~~~l~tl~~D~~LRiW~l~t~--~~~~~ 255 (547)
T PF11715_consen 230 DTFLFTLSRDHTLRIWSLETG--QCLAT 255 (547)
T ss_dssp TTEEEEEETTSEEEEEETTTT--CEEEE
T ss_pred CCEEEEEeCCCeEEEEECCCC--eEEEE
Confidence 577878899999999999998 66444
No 424
>TIGR02171 Fb_sc_TIGR02171 Fibrobacter succinogenes paralogous family TIGR02171. This model describes a paralogous family of the rumen bacterium Fibrobacter succinogenes. Eleven members are found in Fibrobacter succinogenes S85, averaging over 900 amino acids in length. More than half are predicted lipoproteins. The function is unknown.
Probab=76.78 E-value=40 Score=28.47 Aligned_cols=67 Identities=13% Similarity=0.164 Sum_probs=45.5
Q ss_pred CeEEEEeCCCCCCCceEE-ecCCCCCEEEEEEccCCCEEEE-EeCCC-----cEEEEECCcc------cc---ccceEEE
Q psy7062 35 QHIRMYDFGSNNPNPVIN-CEGVSKNVVEVGFQEDGKWMFT-GGEDC-----RARIWDLSLC------FI---QQVNALR 98 (148)
Q Consensus 35 ~~v~~~d~~~~~~~~~~~-~~~~~~~i~~~~~sp~~~~l~~-~~~~~-----~i~l~d~~~~------~~---~~i~~~~ 98 (148)
+.+.+-|.... .+... ++ ++..+..-+|||||+.++- .+.++ .|.+-|+.+. +. ..|..-.
T Consensus 329 ~~L~~~D~dG~--n~~~ve~~-~~~~i~sP~~SPDG~~vAY~ts~e~~~g~s~vYv~~L~t~~~~~vkl~ve~aaiprwr 405 (912)
T TIGR02171 329 GNLAYIDYTKG--ASRAVEIE-DTISVYHPDISPDGKKVAFCTGIEGLPGKSSVYVRNLNASGSGLVKLPVENAAIPRWR 405 (912)
T ss_pred CeEEEEecCCC--CceEEEec-CCCceecCcCCCCCCEEEEEEeecCCCCCceEEEEehhccCCCceEeecccccccceE
Confidence 47778888876 33333 33 6778888999999998877 45444 4778888765 22 4455555
Q ss_pred EccCCC
Q psy7062 99 ITPDKQ 104 (148)
Q Consensus 99 ~sp~~~ 104 (148)
..++|.
T Consensus 406 v~e~gd 411 (912)
T TIGR02171 406 VLENGD 411 (912)
T ss_pred ecCCCC
Confidence 566665
No 425
>smart00564 PQQ beta-propeller repeat. Beta-propeller repeat occurring in enzymes with pyrrolo-quinoline quinone (PQQ) as cofactor, in Ire1p-like Ser/Thr kinases, and in prokaryotic dehydrogenases.
Probab=76.42 E-value=5.8 Score=17.73 Aligned_cols=24 Identities=8% Similarity=-0.083 Sum_probs=18.1
Q ss_pred EEEEEecCCeEEEEeCCCCCCCceEE
Q psy7062 27 MVAALGGYQHIRMYDFGSNNPNPVIN 52 (148)
Q Consensus 27 ~l~~~~~d~~v~~~d~~~~~~~~~~~ 52 (148)
.++.++.++.+..+|.+++ +.+..
T Consensus 8 ~v~~~~~~g~l~a~d~~~G--~~~W~ 31 (33)
T smart00564 8 TVYVGSTDGTLYALDAKTG--EILWT 31 (33)
T ss_pred EEEEEcCCCEEEEEEcccC--cEEEE
Confidence 4566688899999999887 55543
No 426
>KOG2377|consensus
Probab=75.64 E-value=36 Score=26.54 Aligned_cols=78 Identities=9% Similarity=0.037 Sum_probs=50.9
Q ss_pred ccEEEEEecCCeEEEEeCCCCCCCceEEe-cCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----cc-------
Q psy7062 25 VEMVAALGGYQHIRMYDFGSNNPNPVINC-EGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-----FI------- 91 (148)
Q Consensus 25 ~~~l~~~~~d~~v~~~d~~~~~~~~~~~~-~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-----~~------- 91 (148)
.+++++.+ |.+.=|.++..+....-.+ ....+.|.++.||+|.+.++.-..+.++.+++.... +.
T Consensus 35 kqlfavrS--ggatgvvvkgpndDVpiSfdm~d~G~I~SIkFSlDnkilAVQR~~~~v~f~nf~~d~~~l~~~~~ck~k~ 112 (657)
T KOG2377|consen 35 KQLFAVRS--GGATGVVVKGPNDDVPISFDMDDKGEIKSIKFSLDNKILAVQRTSKTVDFCNFIPDNSQLEYTQECKTKN 112 (657)
T ss_pred ceEEEEec--CCeeEEEEeCCCCCCCceeeecCCCceeEEEeccCcceEEEEecCceEEEEecCCCchhhHHHHHhccCc
Confidence 56666633 3444445544321222222 224568999999999999999999999999998332 11
Q ss_pred ccceEEEEccCCC
Q psy7062 92 QQVNALRITPDKQ 104 (148)
Q Consensus 92 ~~i~~~~~sp~~~ 104 (148)
..|..+.|+.+..
T Consensus 113 ~~IlGF~W~~s~e 125 (657)
T KOG2377|consen 113 ANILGFCWTSSTE 125 (657)
T ss_pred ceeEEEEEecCee
Confidence 5588888987633
No 427
>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases. The alignment model contains an 8-bladed beta-propeller.
Probab=75.29 E-value=36 Score=26.38 Aligned_cols=95 Identities=5% Similarity=-0.045 Sum_probs=53.6
Q ss_pred EEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEE-----------------EeCCCcEEEEECCcc
Q psy7062 27 MVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFT-----------------GGEDCRARIWDLSLC 89 (148)
Q Consensus 27 ~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~-----------------~~~~~~i~l~d~~~~ 89 (148)
+++.++.++.+..+|.+++ +.+...... ...+..+| +..++. ...++.+.-.|..++
T Consensus 303 ~V~~g~~~G~l~ald~~tG--~~~W~~~~~---~~~~~~~~-~~vyv~~~~~~~~~~~~~~~~~~~~~~G~l~AlD~~tG 376 (488)
T cd00216 303 AIVHAPKNGFFYVLDRTTG--KLISARPEV---EQPMAYDP-GLVYLGAFHIPLGLPPQKKKRCKKPGKGGLAALDPKTG 376 (488)
T ss_pred EEEEECCCceEEEEECCCC--cEeeEeEee---ccccccCC-ceEEEccccccccCcccccCCCCCCCceEEEEEeCCCC
Confidence 5666678899999999999 766654321 11123333 221111 123466777787777
Q ss_pred ---cc---c----------cceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCccee
Q psy7062 90 ---FI---Q----------QVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVV 133 (148)
Q Consensus 90 ---~~---~----------~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~ 133 (148)
.+ . +...-...-.+..++.++.|+ .++-+|..+.+..-
T Consensus 377 ~~~W~~~~~~~~~~~~~g~~~~~~~~~~~g~~v~~g~~dG------~l~ald~~tG~~lW 430 (488)
T cd00216 377 KVVWEKREGTIRDSWNIGFPHWGGSLATAGNLVFAGAADG------YFRAFDATTGKELW 430 (488)
T ss_pred cEeeEeeCCccccccccCCcccCcceEecCCeEEEECCCC------eEEEEECCCCceee
Confidence 11 1 000001112556778888877 78888877766543
No 428
>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]
Probab=74.63 E-value=30 Score=25.18 Aligned_cols=96 Identities=10% Similarity=0.037 Sum_probs=58.9
Q ss_pred CcEEEEEeCCCCccEEEE-EecCCeEEEEeCCC--CC--CC-ceEEecCCCCCEEEEEEccCCCEEEEEeCCC-cEEEEE
Q psy7062 13 GQISTVFDSKHLVEMVAA-LGGYQHIRMYDFGS--NN--PN-PVINCEGVSKNVVEVGFQEDGKWMFTGGEDC-RARIWD 85 (148)
Q Consensus 13 ~~~~~~~~~~~~~~~l~~-~~~d~~v~~~d~~~--~~--~~-~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~-~i~l~d 85 (148)
-.+.++|+|+ ++.|.. =+..+.+..|++.. .. .+ ....+.......-+++...+|.+.+.+...+ .+..|+
T Consensus 164 ~~NGla~SpD--g~tly~aDT~~~~i~r~~~d~~~g~~~~~~~~~~~~~~~G~PDG~~vDadG~lw~~a~~~g~~v~~~~ 241 (307)
T COG3386 164 IPNGLAFSPD--GKTLYVADTPANRIHRYDLDPATGPIGGRRGFVDFDEEPGLPDGMAVDADGNLWVAAVWGGGRVVRFN 241 (307)
T ss_pred ecCceEECCC--CCEEEEEeCCCCeEEEEecCcccCccCCcceEEEccCCCCCCCceEEeCCCCEEEecccCCceEEEEC
Confidence 3578999999 544444 33446788887762 10 01 1222323456667788888999876665554 899999
Q ss_pred CCcc------cc-ccceEEEEc-cCCCEEEEEe
Q psy7062 86 LSLC------FI-QQVNALRIT-PDKQLLASAE 110 (148)
Q Consensus 86 ~~~~------~~-~~i~~~~~s-p~~~~l~~~~ 110 (148)
..-. +. ..+.+++|- |+.+.|..++
T Consensus 242 pdG~l~~~i~lP~~~~t~~~FgG~~~~~L~iTs 274 (307)
T COG3386 242 PDGKLLGEIKLPVKRPTNPAFGGPDLNTLYITS 274 (307)
T ss_pred CCCcEEEEEECCCCCCccceEeCCCcCEEEEEe
Confidence 8833 22 667777774 4555444444
No 429
>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=74.05 E-value=31 Score=25.08 Aligned_cols=104 Identities=9% Similarity=0.062 Sum_probs=68.9
Q ss_pred cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCC-CCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc---
Q psy7062 14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGV-SKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC--- 89 (148)
Q Consensus 14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~-~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~--- 89 (148)
..++.|+|+ .+.|.+-.+...-.++--..+ ..++++.-. -....++.|..++++.++--+++.+.++.+...
T Consensus 88 vS~LTynp~--~rtLFav~n~p~~iVElt~~G--dlirtiPL~g~~DpE~Ieyig~n~fvi~dER~~~l~~~~vd~~t~~ 163 (316)
T COG3204 88 VSSLTYNPD--TRTLFAVTNKPAAIVELTKEG--DLIRTIPLTGFSDPETIEYIGGNQFVIVDERDRALYLFTVDADTTV 163 (316)
T ss_pred ccceeeCCC--cceEEEecCCCceEEEEecCC--ceEEEecccccCChhHeEEecCCEEEEEehhcceEEEEEEcCCccE
Confidence 467888888 444555466666666655566 677776532 345667888888888888888888888776544
Q ss_pred ---------cc------ccceEEEEccCCCEEEEEecCCceecCeeEEEee
Q psy7062 90 ---------FI------QQVNALRITPDKQLLASAEELSCCYCGAAVFVYN 125 (148)
Q Consensus 90 ---------~~------~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d 125 (148)
+. ...-.++|.|..+.|+.+-+-. ...|+.|+
T Consensus 164 ~~~~~~~i~L~~~~k~N~GfEGlA~d~~~~~l~~aKEr~----P~~I~~~~ 210 (316)
T COG3204 164 ISAKVQKIPLGTTNKKNKGFEGLAWDPVDHRLFVAKERN----PIGIFEVT 210 (316)
T ss_pred EeccceEEeccccCCCCcCceeeecCCCCceEEEEEccC----CcEEEEEe
Confidence 11 3456689999777666665433 33455555
No 430
>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation. It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.
Probab=73.75 E-value=28 Score=24.40 Aligned_cols=97 Identities=13% Similarity=0.116 Sum_probs=56.1
Q ss_pred EEEEEeCCCCccEEEEEecCCeEEEEe-CCCCCCCceEE-ecCCCCCEEEEEEccCCCEEEEEe---CCCcEEEEECCcc
Q psy7062 15 ISTVFDSKHLVEMVAALGGYQHIRMYD-FGSNNPNPVIN-CEGVSKNVVEVGFQEDGKWMFTGG---EDCRARIWDLSLC 89 (148)
Q Consensus 15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d-~~~~~~~~~~~-~~~~~~~i~~~~~sp~~~~l~~~~---~~~~i~l~d~~~~ 89 (148)
....|+++ +.+.+....+...+++. ..++....+.. ...-...|..+.+||||.-++... .++.+.+--+...
T Consensus 69 ~~PS~d~~--g~~W~v~~~~~~~~~~~~~~~g~~~~~~v~~~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V~r~ 146 (253)
T PF10647_consen 69 TRPSWDPD--GWVWTVDDGSGGVRVVRDSASGTGEPVEVDWPGLRGRITALRVSPDGTRVAVVVEDGGGGRVYVAGVVRD 146 (253)
T ss_pred ccccccCC--CCEEEEEcCCCceEEEEecCCCcceeEEecccccCCceEEEEECCCCcEEEEEEecCCCCeEEEEEEEeC
Confidence 34455665 66666655555555553 23331121111 111112899999999998665544 2456666544221
Q ss_pred -------c----c------ccceEEEEccCCCEEEEEecCC
Q psy7062 90 -------F----I------QQVNALRITPDKQLLASAEELS 113 (148)
Q Consensus 90 -------~----~------~~i~~~~~sp~~~~l~~~~~d~ 113 (148)
+ . ..+..+.|.+++.+++.+...+
T Consensus 147 ~~g~~~~l~~~~~~~~~~~~~v~~v~W~~~~~L~V~~~~~~ 187 (253)
T PF10647_consen 147 GDGVPRRLTGPRRVAPPLLSDVTDVAWSDDSTLVVLGRSAG 187 (253)
T ss_pred CCCCcceeccceEecccccCcceeeeecCCCEEEEEeCCCC
Confidence 1 1 5788999999999877776544
No 431
>KOG2109|consensus
Probab=72.66 E-value=3.9 Score=32.74 Aligned_cols=75 Identities=7% Similarity=0.122 Sum_probs=56.6
Q ss_pred EEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCC-cEEEEECCcc-----------------cc-ccceEE
Q psy7062 37 IRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDC-RARIWDLSLC-----------------FI-QQVNAL 97 (148)
Q Consensus 37 v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~-~i~l~d~~~~-----------------~~-~~i~~~ 97 (148)
+.+-|+.+. ..+.+++.|+..+..++|.+.+..+++.+..| .|.++.+... +. ..+..+
T Consensus 297 vivkdf~S~--a~i~QfkAhkspiSaLcfdqsgsllViasi~g~nVnvfRimet~~t~~~~~qs~~~s~ra~t~aviqdi 374 (788)
T KOG2109|consen 297 VIVKDFDSF--ADIRQFKAHKSPISALCFDQSGSLLVIASITGRNVNVFRIMETVCTVNVSDQSLVVSPRANTAAVIQDI 374 (788)
T ss_pred EEeecccch--hhhhheeeecCcccccccccCceEEEEEeeccceeeeEEeccccccccccccccccchhcchHHHHHHH
Confidence 555588777 78899999999999999999999999988765 4555554322 11 446667
Q ss_pred EEccCCCEEEEEecCC
Q psy7062 98 RITPDKQLLASAEELS 113 (148)
Q Consensus 98 ~~sp~~~~l~~~~~d~ 113 (148)
+|+...+++..++.+|
T Consensus 375 cfs~~s~~r~~gsc~G 390 (788)
T KOG2109|consen 375 CFSEVSTIRTAGSCEG 390 (788)
T ss_pred hhhhhcceEeecccCC
Confidence 8888888888887766
No 432
>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat. This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).
Probab=72.49 E-value=8.9 Score=18.09 Aligned_cols=27 Identities=11% Similarity=0.174 Sum_probs=18.4
Q ss_pred EEEEEecCCeEEEEeCCCCCCCceEEecC
Q psy7062 27 MVAALGGYQHIRMYDFGSNNPNPVINCEG 55 (148)
Q Consensus 27 ~l~~~~~d~~v~~~d~~~~~~~~~~~~~~ 55 (148)
++++.-.+++|.++|..+. +.+..+..
T Consensus 6 lyv~~~~~~~v~~id~~~~--~~~~~i~v 32 (42)
T TIGR02276 6 LYVTNSGSNTVSVIDTATN--KVIATIPV 32 (42)
T ss_pred EEEEeCCCCEEEEEECCCC--eEEEEEEC
Confidence 4444345678999999887 66666553
No 433
>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs. It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].
Probab=71.96 E-value=55 Score=27.00 Aligned_cols=33 Identities=18% Similarity=0.187 Sum_probs=28.1
Q ss_pred CCCEEEEEEccC---CCEEEEEeCCCcEEEEECCcc
Q psy7062 57 SKNVVEVGFQED---GKWMFTGGEDCRARIWDLSLC 89 (148)
Q Consensus 57 ~~~i~~~~~sp~---~~~l~~~~~~~~i~l~d~~~~ 89 (148)
...|..+.|+|. +..++.-..|+++++||+...
T Consensus 146 ~~~i~qv~WhP~s~~~~~l~vLtsdn~lR~y~~~~~ 181 (717)
T PF10168_consen 146 SLEIKQVRWHPWSESDSHLVVLTSDNTLRLYDISDP 181 (717)
T ss_pred CceEEEEEEcCCCCCCCeEEEEecCCEEEEEecCCC
Confidence 457899999996 478888899999999999764
No 434
>TIGR03606 non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH family. PQQ, or pyrroloquinoline-quinone, serves as a cofactor for a number of sugar and alcohol dehydrogenases in a limited number of bacterial species. Most characterized PQQ-dependent enzymes have multiple repeats of a sequence region described by pfam01011 (PQQ enzyme repeat), but this protein family in unusual in lacking that repeat. Below the noise cutoff are related proteins mostly from species that lack PQQ biosynthesis.
Probab=71.92 E-value=44 Score=25.88 Aligned_cols=98 Identities=7% Similarity=0.081 Sum_probs=58.0
Q ss_pred cCcEEEEEeCCCCccEEEEEec-CCeEEEEeCCCCCCCceEEec----C-CCCCEEEEEEccCC------CEEEEE-eC-
Q psy7062 12 FGQISTVFDSKHLVEMVAALGG-YQHIRMYDFGSNNPNPVINCE----G-VSKNVVEVGFQEDG------KWMFTG-GE- 77 (148)
Q Consensus 12 ~~~~~~~~~~~~~~~~l~~~~~-d~~v~~~d~~~~~~~~~~~~~----~-~~~~i~~~~~sp~~------~~l~~~-~~- 77 (148)
..+-.++|.++ +.+|++ .. .+.|++++..+.....+..+. . -......|+++|+- .++... +.
T Consensus 30 ~~Pw~maflPD--G~llVt-ER~~G~I~~v~~~~~~~~~~~~l~~v~~~~ge~GLlglal~PdF~~~~~n~~lYvsyt~~ 106 (454)
T TIGR03606 30 NKPWALLWGPD--NQLWVT-ERATGKILRVNPETGEVKVVFTLPEIVNDAQHNGLLGLALHPDFMQEKGNPYVYISYTYK 106 (454)
T ss_pred CCceEEEEcCC--CeEEEE-EecCCEEEEEeCCCCceeeeecCCceeccCCCCceeeEEECCCccccCCCcEEEEEEecc
Confidence 34678888887 888888 55 599999887654212222221 1 24668899999874 233222 11
Q ss_pred --------CCcEEEEECCc--c--------cc-------ccceEEEEccCCCEEEEEecC
Q psy7062 78 --------DCRARIWDLSL--C--------FI-------QQVNALRITPDKQLLASAEEL 112 (148)
Q Consensus 78 --------~~~i~l~d~~~--~--------~~-------~~i~~~~~sp~~~~l~~~~~d 112 (148)
...|.-|.+.. . |. +.-..+.|.|||.++++.+..
T Consensus 107 ~~~~~~~~~~~I~R~~l~~~~~~l~~~~~Il~~lP~~~~H~GgrI~FgPDG~LYVs~GD~ 166 (454)
T TIGR03606 107 NGDKELPNHTKIVRYTYDKSTQTLEKPVDLLAGLPAGNDHNGGRLVFGPDGKIYYTIGEQ 166 (454)
T ss_pred CCCCCccCCcEEEEEEecCCCCccccceEEEecCCCCCCcCCceEEECCCCcEEEEECCC
Confidence 22344444431 1 21 345678899999876666543
No 435
>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.
Probab=71.92 E-value=32 Score=27.09 Aligned_cols=52 Identities=13% Similarity=0.052 Sum_probs=31.5
Q ss_pred CeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc
Q psy7062 35 QHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC 89 (148)
Q Consensus 35 ~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~ 89 (148)
+.+.-+|+.++ +.+...+.......+. +.-.+..++.++.+|.++.+|.+++
T Consensus 441 g~l~AiD~~tG--k~~W~~~~~~p~~~~~-l~t~g~lvf~g~~~G~l~a~D~~TG 492 (527)
T TIGR03075 441 GSLIAWDPITG--KIVWEHKEDFPLWGGV-LATAGDLVFYGTLEGYFKAFDAKTG 492 (527)
T ss_pred eeEEEEeCCCC--ceeeEecCCCCCCCcc-eEECCcEEEEECCCCeEEEEECCCC
Confidence 45777788777 5555444221111111 1224556677888899999999988
No 436
>PF12657 TFIIIC_delta: Transcription factor IIIC subunit delta N-term; InterPro: IPR024761 This entry represents a domain found towards the N terminus of the 90 kDa subunit of transcription factor IIIC (also known as subunit 9 in yeast []). The whole subunit is involved in RNA polymerase III-mediated transcription. It is possible that this N-terminal domain interacts with TFIIIC subunit 8 [].
Probab=71.90 E-value=6.3 Score=25.87 Aligned_cols=29 Identities=31% Similarity=0.390 Sum_probs=19.1
Q ss_pred ceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062 94 VNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA 130 (148)
Q Consensus 94 i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~ 130 (148)
..+++||+||+..+.++. .|+|.+...|.
T Consensus 7 ~~~l~WS~Dg~laV~t~~--------~v~IL~~~~P~ 35 (173)
T PF12657_consen 7 PNALAWSEDGQLAVATGE--------SVHILDPQTPN 35 (173)
T ss_pred CcCeeECCCCCEEEEcCC--------eEEEEeccCCc
Confidence 367888888876665554 57777544443
No 437
>PF10214 Rrn6: RNA polymerase I-specific transcription-initiation factor; InterPro: IPR019350 RNA polymerase I-specific transcription-initiation factor Rrn6 and Rrn7 represent components of a multisubunit transcription factor essential for the initiation of rDNA transcription by Pol I []. These proteins are found in fungi.
Probab=71.69 E-value=42 Score=27.80 Aligned_cols=67 Identities=12% Similarity=0.121 Sum_probs=48.2
Q ss_pred CCEEEEEEcc-CCCEEEEEeCCCcEEEEECCcc-------cc------ccc----------eEEEEccCCCEEEEEecCC
Q psy7062 58 KNVVEVGFQE-DGKWMFTGGEDCRARIWDLSLC-------FI------QQV----------NALRITPDKQLLASAEELS 113 (148)
Q Consensus 58 ~~i~~~~~sp-~~~~l~~~~~~~~i~l~d~~~~-------~~------~~i----------~~~~~sp~~~~l~~~~~d~ 113 (148)
.....++|+| +.+.++..+..|...+||+... +. +.+ ..+.|.++...|+.+++.
T Consensus 146 ~~~aDv~FnP~~~~q~AiVD~~G~Wsvw~i~~~~~~~~~~~~~~~~~~gsi~~d~~e~s~w~rI~W~~~~~~lLv~~r~- 224 (765)
T PF10214_consen 146 FPHADVAFNPWDQRQFAIVDEKGNWSVWDIKGRPKRKSSNLRLSRNISGSIIFDPEELSNWKRILWVSDSNRLLVCNRS- 224 (765)
T ss_pred CccceEEeccCccceEEEEeccCcEEEEEeccccccCCcceeeccCCCccccCCCcccCcceeeEecCCCCEEEEEcCC-
Confidence 4567889999 5668899999999999999221 11 222 367788888888777752
Q ss_pred ceecCeeEEEeecCCCcc
Q psy7062 114 CCYCGAAVFVYNSCYPAA 131 (148)
Q Consensus 114 ~~~~~~~i~~~d~~~~~~ 131 (148)
.+.++|+.+...
T Consensus 225 ------~l~~~d~~~~~~ 236 (765)
T PF10214_consen 225 ------KLMLIDFESNWQ 236 (765)
T ss_pred ------ceEEEECCCCCc
Confidence 488888876544
No 438
>PHA02790 Kelch-like protein; Provisional
Probab=71.07 E-value=46 Score=25.76 Aligned_cols=100 Identities=13% Similarity=-0.032 Sum_probs=51.5
Q ss_pred ccEEEEEecCC---eEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----cc----cc
Q psy7062 25 VEMVAALGGYQ---HIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC----FI----QQ 93 (148)
Q Consensus 25 ~~~l~~~~~d~---~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~----~~----~~ 93 (148)
+.+.+.|+.++ ++..||.++........+....... ....-+++..+.|+ ....||..+. +. .+
T Consensus 363 g~IYviGG~~~~~~~ve~ydp~~~~W~~~~~m~~~r~~~--~~~~~~~~IYv~GG---~~e~ydp~~~~W~~~~~m~~~r 437 (480)
T PHA02790 363 NVIYVIGGHSETDTTTEYLLPNHDQWQFGPSTYYPHYKS--CALVFGRRLFLVGR---NAEFYCESSNTWTLIDDPIYPR 437 (480)
T ss_pred CEEEEecCcCCCCccEEEEeCCCCEEEeCCCCCCccccc--eEEEECCEEEEECC---ceEEecCCCCcEeEcCCCCCCc
Confidence 56666666443 4778888765212221222111111 22234666666664 4677888766 11 11
Q ss_pred ceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062 94 VNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA 130 (148)
Q Consensus 94 i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~ 130 (148)
...-...-+++..+.|+.++... ...+..||..+.+
T Consensus 438 ~~~~~~v~~~~IYviGG~~~~~~-~~~ve~Yd~~~~~ 473 (480)
T PHA02790 438 DNPELIIVDNKLLLIGGFYRGSY-IDTIEVYNNRTYS 473 (480)
T ss_pred cccEEEEECCEEEEECCcCCCcc-cceEEEEECCCCe
Confidence 12222233778778877654211 2467888887544
No 439
>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=70.80 E-value=38 Score=24.67 Aligned_cols=70 Identities=13% Similarity=0.135 Sum_probs=46.9
Q ss_pred cCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-------cc--ccceEEEEccCCCEEEEEecCCceecCeeEEEe
Q psy7062 54 EGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-------FI--QQVNALRITPDKQLLASAEELSCCYCGAAVFVY 124 (148)
Q Consensus 54 ~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-------~~--~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~ 124 (148)
.+....+.++.|+|+.+.+++......-.++=...+ +. +..-.+.|..++++.++--+++ +++++
T Consensus 82 ~g~~~nvS~LTynp~~rtLFav~n~p~~iVElt~~GdlirtiPL~g~~DpE~Ieyig~n~fvi~dER~~------~l~~~ 155 (316)
T COG3204 82 LGETANVSSLTYNPDTRTLFAVTNKPAAIVELTKEGDLIRTIPLTGFSDPETIEYIGGNQFVIVDERDR------ALYLF 155 (316)
T ss_pred ccccccccceeeCCCcceEEEecCCCceEEEEecCCceEEEecccccCChhHeEEecCCEEEEEehhcc------eEEEE
Confidence 445566999999999999988877766666544444 22 4445566767777766666655 66666
Q ss_pred ecCCC
Q psy7062 125 NSCYP 129 (148)
Q Consensus 125 d~~~~ 129 (148)
.+...
T Consensus 156 ~vd~~ 160 (316)
T COG3204 156 TVDAD 160 (316)
T ss_pred EEcCC
Confidence 65544
No 440
>PHA02790 Kelch-like protein; Provisional
Probab=70.42 E-value=48 Score=25.68 Aligned_cols=100 Identities=11% Similarity=0.040 Sum_probs=51.8
Q ss_pred ccEEEEEecC-----CeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCC--CcEEEEECCcc-------c
Q psy7062 25 VEMVAALGGY-----QHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGED--CRARIWDLSLC-------F 90 (148)
Q Consensus 25 ~~~l~~~~~d-----~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~--~~i~l~d~~~~-------~ 90 (148)
+.+++.|+.+ .++..||..+.....+..+........ ...-+++..+.|+.+ ..+..||.... +
T Consensus 272 ~~lyviGG~~~~~~~~~v~~Ydp~~~~W~~~~~m~~~r~~~~--~v~~~~~iYviGG~~~~~sve~ydp~~n~W~~~~~l 349 (480)
T PHA02790 272 EVVYLIGGWMNNEIHNNAIAVNYISNNWIPIPPMNSPRLYAS--GVPANNKLYVVGGLPNPTSVERWFHGDAAWVNMPSL 349 (480)
T ss_pred CEEEEEcCCCCCCcCCeEEEEECCCCEEEECCCCCchhhcce--EEEECCEEEEECCcCCCCceEEEECCCCeEEECCCC
Confidence 4556666643 257788887752112222221111121 223467777777754 35778887654 1
Q ss_pred cccc-eEEEEccCCCEEEEEecCCceecCeeEEEeecCCC
Q psy7062 91 IQQV-NALRITPDKQLLASAEELSCCYCGAAVFVYNSCYP 129 (148)
Q Consensus 91 ~~~i-~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~ 129 (148)
..+. ......-+++..+.|+.++. ...+..||..+.
T Consensus 350 ~~~r~~~~~~~~~g~IYviGG~~~~---~~~ve~ydp~~~ 386 (480)
T PHA02790 350 LKPRCNPAVASINNVIYVIGGHSET---DTTTEYLLPNHD 386 (480)
T ss_pred CCCCcccEEEEECCEEEEecCcCCC---CccEEEEeCCCC
Confidence 1111 11222337777777776541 235677886643
No 441
>KOG1916|consensus
Probab=70.28 E-value=2.3 Score=35.30 Aligned_cols=60 Identities=12% Similarity=0.081 Sum_probs=40.4
Q ss_pred cEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEE-----------EEccCCCEEEEEeCCCcEEEEECCc
Q psy7062 26 EMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEV-----------GFQEDGKWMFTGGEDCRARIWDLSL 88 (148)
Q Consensus 26 ~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~-----------~~sp~~~~l~~~~~~~~i~l~d~~~ 88 (148)
-+++.+-.++++++...+.. ....+.+|..+++.+ .+||||..++..+.||.+++|.+.-
T Consensus 196 ~~ic~~~~~~~i~lL~~~ra---~~~l~rsHs~~~~d~a~~~~g~~~l~~lSpDGtv~a~a~~dG~v~f~Qiyi 266 (1283)
T KOG1916|consen 196 VYICYGLKGGEIRLLNINRA---LRSLFRSHSQRVTDMAFFAEGVLKLASLSPDGTVFAWAISDGSVGFYQIYI 266 (1283)
T ss_pred ceeeeccCCCceeEeeechH---HHHHHHhcCCCcccHHHHhhchhhheeeCCCCcEEEEeecCCccceeeeee
Confidence 44555456667888777654 224444565444322 4789999999999999988888753
No 442
>TIGR03606 non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH family. PQQ, or pyrroloquinoline-quinone, serves as a cofactor for a number of sugar and alcohol dehydrogenases in a limited number of bacterial species. Most characterized PQQ-dependent enzymes have multiple repeats of a sequence region described by pfam01011 (PQQ enzyme repeat), but this protein family in unusual in lacking that repeat. Below the noise cutoff are related proteins mostly from species that lack PQQ biosynthesis.
Probab=68.99 E-value=45 Score=25.85 Aligned_cols=59 Identities=8% Similarity=-0.055 Sum_probs=32.0
Q ss_pred CCCCccEEEEEecCCeEEEEeCCCCC--C--CceEEecCCCCCEEEEEEccCC-CEEEEEeCCCc
Q psy7062 21 SKHLVEMVAALGGYQHIRMYDFGSNN--P--NPVINCEGVSKNVVEVGFQEDG-KWMFTGGEDCR 80 (148)
Q Consensus 21 ~~~~~~~l~~~~~d~~v~~~d~~~~~--~--~~~~~~~~~~~~i~~~~~sp~~-~~l~~~~~~~~ 80 (148)
+.+.+.+|+++-..+.+....++... . +....+.. ..++..+...||| .+.+..+..|.
T Consensus 365 p~w~g~llv~~L~~~~l~r~~l~~~~~~v~~~~~~~~~~-~~RiRdv~~~pDg~~iy~~td~~g~ 428 (454)
T TIGR03606 365 TGWENSLLIPSLKRGVIYRIKLDPDYSTVYGDAVPMFKT-NNRYRDVIASPDGNVLYVATDNFGN 428 (454)
T ss_pred cccCCCEEEEEcCCCeEEEEEecCCcceecceeEEeecC-CCeeEEEEECCCCCEEEEEEcCCCc
Confidence 34456777775566666666665331 0 11222333 4678888888886 43333334443
No 443
>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A.
Probab=68.90 E-value=34 Score=25.82 Aligned_cols=83 Identities=14% Similarity=0.123 Sum_probs=38.3
Q ss_pred eCCCCCCCceEEecCCCCCE-----EEEEEccCCCEE-EEEeCCC--cEEEEECCcc----cc----ccceEEEEccCCC
Q psy7062 41 DFGSNNPNPVINCEGVSKNV-----VEVGFQEDGKWM-FTGGEDC--RARIWDLSLC----FI----QQVNALRITPDKQ 104 (148)
Q Consensus 41 d~~~~~~~~~~~~~~~~~~i-----~~~~~sp~~~~l-~~~~~~~--~i~l~d~~~~----~~----~~i~~~~~sp~~~ 104 (148)
|..++ ..+..+..+...- +.=+|.+||+.| +.+..++ .+.+.|+.++ |. .......++|+.+
T Consensus 16 D~~TG--~~VtrLT~~~~~~h~~YF~~~~ft~dG~kllF~s~~dg~~nly~lDL~t~~i~QLTdg~g~~~~g~~~s~~~~ 93 (386)
T PF14583_consen 16 DPDTG--HRVTRLTPPDGHSHRLYFYQNCFTDDGRKLLFASDFDGNRNLYLLDLATGEITQLTDGPGDNTFGGFLSPDDR 93 (386)
T ss_dssp -TTT----EEEE-S-TTS-EE---TTS--B-TTS-EEEEEE-TTSS-EEEEEETTT-EEEE---SS-B-TTT-EE-TTSS
T ss_pred CCCCC--ceEEEecCCCCcccceeecCCCcCCCCCEEEEEeccCCCcceEEEEcccCEEEECccCCCCCccceEEecCCC
Confidence 66666 5555554322211 122677889755 4455555 5667788887 33 2344567788777
Q ss_pred EEEEEecCCceecCeeEEEeecCCCcc
Q psy7062 105 LLASAEELSCCYCGAAVFVYNSCYPAA 131 (148)
Q Consensus 105 ~l~~~~~d~~~~~~~~i~~~d~~~~~~ 131 (148)
.++-.-... .+.-.|+.+.+.
T Consensus 94 ~~~Yv~~~~------~l~~vdL~T~e~ 114 (386)
T PF14583_consen 94 ALYYVKNGR------SLRRVDLDTLEE 114 (386)
T ss_dssp EEEEEETTT------EEEEEETTT--E
T ss_pred eEEEEECCC------eEEEEECCcCcE
Confidence 766544323 677777776653
No 444
>PF07250 Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterPro: IPR009880 This entry represents the N terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes. Glyoxal oxidase catalyses the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium [].
Probab=66.10 E-value=38 Score=23.81 Aligned_cols=73 Identities=21% Similarity=0.200 Sum_probs=44.7
Q ss_pred EEEEeCCCCCCCceEEecC-CCCCEEEEEEccCCCEEEEEeC-C--CcEEEEECCcc------c------c--ccceEEE
Q psy7062 37 IRMYDFGSNNPNPVINCEG-VSKNVVEVGFQEDGKWMFTGGE-D--CRARIWDLSLC------F------I--QQVNALR 98 (148)
Q Consensus 37 v~~~d~~~~~~~~~~~~~~-~~~~i~~~~~sp~~~~l~~~~~-~--~~i~l~d~~~~------~------~--~~i~~~~ 98 (148)
-.+||+.+. ..+.+.. ......+-.+-+||+++.+|+. + ..+++++.... . . .+-....
T Consensus 48 s~~yD~~tn---~~rpl~v~td~FCSgg~~L~dG~ll~tGG~~~G~~~ir~~~p~~~~~~~~w~e~~~~m~~~RWYpT~~ 124 (243)
T PF07250_consen 48 SVEYDPNTN---TFRPLTVQTDTFCSGGAFLPDGRLLQTGGDNDGNKAIRIFTPCTSDGTCDWTESPNDMQSGRWYPTAT 124 (243)
T ss_pred EEEEecCCC---cEEeccCCCCCcccCcCCCCCCCEEEeCCCCccccceEEEecCCCCCCCCceECcccccCCCccccce
Confidence 457888886 2333332 2233344456799999988775 3 35888887551 1 1 2233334
Q ss_pred EccCCCEEEEEecC
Q psy7062 99 ITPDKQLLASAEEL 112 (148)
Q Consensus 99 ~sp~~~~l~~~~~d 112 (148)
--|||+.|+.|+..
T Consensus 125 ~L~DG~vlIvGG~~ 138 (243)
T PF07250_consen 125 TLPDGRVLIVGGSN 138 (243)
T ss_pred ECCCCCEEEEeCcC
Confidence 45799999988874
No 445
>PF01011 PQQ: PQQ enzyme repeat family.; InterPro: IPR002372 Pyrrolo-quinoline quinone (PQQ) is a redox coenzyme, which serves as a cofactor for a number of enzymes (quinoproteins) and particularly for some bacterial dehydrogenases [, ]. A number of bacterial quinoproteins belong to this family. Enzymes in this group have repeats of a beta propeller.; PDB: 1H4I_C 1H4J_E 1W6S_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A 1G72_A ....
Probab=65.39 E-value=14 Score=17.45 Aligned_cols=24 Identities=4% Similarity=-0.150 Sum_probs=19.2
Q ss_pred EEEecCCeEEEEeCCCCCCCceEEec
Q psy7062 29 AALGGYQHIRMYDFGSNNPNPVINCE 54 (148)
Q Consensus 29 ~~~~~d~~v~~~d~~~~~~~~~~~~~ 54 (148)
..++.++.+.-.|.+++ +.+..++
T Consensus 4 ~~~~~~g~l~AlD~~TG--~~~W~~~ 27 (38)
T PF01011_consen 4 YVGTPDGYLYALDAKTG--KVLWKFQ 27 (38)
T ss_dssp EEETTTSEEEEEETTTT--SEEEEEE
T ss_pred EEeCCCCEEEEEECCCC--CEEEeee
Confidence 34488899999999999 7777765
No 446
>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases. The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....
Probab=62.04 E-value=50 Score=24.19 Aligned_cols=59 Identities=15% Similarity=0.103 Sum_probs=34.2
Q ss_pred CCccEEEEEecCCeEEEEeCCCCCCCc--eEE-ecCCCCCEEEEEEccCCCEEEEEeCCCcEE
Q psy7062 23 HLVEMVAALGGYQHIRMYDFGSNNPNP--VIN-CEGVSKNVVEVGFQEDGKWMFTGGEDCRAR 82 (148)
Q Consensus 23 ~~~~~l~~~~~d~~v~~~d~~~~~~~~--~~~-~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~ 82 (148)
..+.++++.-..+.|....++... +. ... +.....++..+++.|||.++++.+.+|.|.
T Consensus 269 ~~g~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~~~~r~~~v~~~pDG~Lyv~~d~~G~iy 330 (331)
T PF07995_consen 269 YRGDLFVADYGGGRIWRLDLDEDG-SVTEEEEFLGGFGGRPRDVAQGPDGALYVSDDSDGKIY 330 (331)
T ss_dssp GTTEEEEEETTTTEEEEEEEETTE-EEEEEEEECTTSSS-EEEEEEETTSEEEEEE-TTTTEE
T ss_pred ccCcEEEecCCCCEEEEEeeecCC-CccceEEccccCCCCceEEEEcCCCeEEEEECCCCeEe
Confidence 346677664445567776765431 11 112 223344788888888888877777777663
No 447
>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases. The alignment model contains an 8-bladed beta-propeller.
Probab=61.39 E-value=75 Score=24.67 Aligned_cols=63 Identities=16% Similarity=0.055 Sum_probs=40.0
Q ss_pred ccEEEEEecCCeEEEEeCCCCCCCceEEecCCCC------CEEEEEEcc-CCCEEEEEeCCCcEEEEECCcc
Q psy7062 25 VEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSK------NVVEVGFQE-DGKWMFTGGEDCRARIWDLSLC 89 (148)
Q Consensus 25 ~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~------~i~~~~~sp-~~~~l~~~~~~~~i~l~d~~~~ 89 (148)
+..++.++.++.+...|.+++ +.+........ .+..-...- ++..++.++.++.+.-+|.+++
T Consensus 61 ~g~vy~~~~~g~l~AlD~~tG--~~~W~~~~~~~~~~~~~~~~~~g~~~~~~~~V~v~~~~g~v~AlD~~TG 130 (488)
T cd00216 61 DGDMYFTTSHSALFALDAATG--KVLWRYDPKLPADRGCCDVVNRGVAYWDPRKVFFGTFDGRLVALDAETG 130 (488)
T ss_pred CCEEEEeCCCCcEEEEECCCC--hhhceeCCCCCccccccccccCCcEEccCCeEEEecCCCeEEEEECCCC
Confidence 344556577899999999998 66665543221 010000011 2256777888999999999988
No 448
>PF01731 Arylesterase: Arylesterase; InterPro: IPR002640 The serum paraoxonases/arylesterases are enzymes that catalyse the hydrolysis of the toxic metabolites of a variety of organophosphorus insecticides. The enzymes hydrolyse a broad spectrum of organophosphate substrates, including paraoxon and a number of aromatic carboxylic acid esters (e.g., phenyl acetate), and hence confer resistance to organophosphate toxicity []. Mammals have 3 distinct paraoxonase types, termed PON1-3 [, ]. In mice and humans, the PON genes are found on the same chromosome in close proximity. PON activity has been found in variety of tissues, with highest levels in liver and serum - the source of serum PON is thought to be the liver. Unlike mammals, fish and avian species lack paraoxonase activity. Human and rabbit PONs appear to have two distinct Ca2+ binding sites, one required for stability and one required for catalytic activity. The Ca2+ dependency of PONs suggests a mechanism of hydrolysis where Ca2+ acts as the electrophillic catalyst, like that proposed for phospholipase A2. The paraoxonase enzymes, PON1 and PON3, are high density lipoprotein (HDL)- associated proteins capable of preventing oxidative modification of low density lipoproteins (LPL) []. Although PON2 has oxidative properties, the enzyme does not associate with HDL. Within a given species, PON1, PON2 and PON3 share ~60% amino acid sequence identity, whereas between mammalian species particular PONs (1,2 or 3) share 79-90% identity at the amino acid level. Human PON1 and PON3 share numerous conserved phosphorylation and N-glycosylation sites; however, it is not known whether the PON proteins are modified at these sites, or whether modification at these sites is required for activity in vivo []. This family consists of arylesterases (Also known as serum paraoxonase) 3.1.1.2 from EC. These enzymes hydrolyse organophosphorus esters such as paraoxon and are found in the liver and blood. They confer resistance to organophosphate toxicity []. Human arylesterase (PON1) P27169 from SWISSPROT is associated with HDL and may protect against LDL oxidation [].; GO: 0004064 arylesterase activity
Probab=61.03 E-value=30 Score=20.02 Aligned_cols=30 Identities=7% Similarity=0.209 Sum_probs=20.2
Q ss_pred CCEEEEEEccCCCEEEEEe-CCCcEEEEECC
Q psy7062 58 KNVVEVGFQEDGKWMFTGG-EDCRARIWDLS 87 (148)
Q Consensus 58 ~~i~~~~~sp~~~~l~~~~-~~~~i~l~d~~ 87 (148)
....+|.++|+++.+..++ ..+.|++|..+
T Consensus 54 ~~aNGI~~s~~~k~lyVa~~~~~~I~vy~~~ 84 (86)
T PF01731_consen 54 SFANGIAISPDKKYLYVASSLAHSIHVYKRH 84 (86)
T ss_pred CCCceEEEcCCCCEEEEEeccCCeEEEEEec
Confidence 3456778888888765554 45678887764
No 449
>PF13570 PQQ_3: PQQ-like domain; PDB: 3HXJ_B 3Q54_A.
Probab=60.80 E-value=17 Score=17.15 Aligned_cols=21 Identities=19% Similarity=0.269 Sum_probs=15.8
Q ss_pred CCCEEEEEeCCCcEEEEECCc
Q psy7062 68 DGKWMFTGGEDCRARIWDLSL 88 (148)
Q Consensus 68 ~~~~l~~~~~~~~i~l~d~~~ 88 (148)
.+..++.++.++.+..+|.++
T Consensus 20 ~~g~vyv~~~dg~l~ald~~t 40 (40)
T PF13570_consen 20 AGGRVYVGTGDGNLYALDAAT 40 (40)
T ss_dssp CTSEEEEE-TTSEEEEEETT-
T ss_pred ECCEEEEEcCCCEEEEEeCCC
Confidence 466788888999999999764
No 450
>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []. RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].
Probab=60.34 E-value=69 Score=26.44 Aligned_cols=63 Identities=13% Similarity=0.214 Sum_probs=39.9
Q ss_pred CccEEEEEecCCeEEEEeCCCCCCCce-EEecCCCCCEEEEEEccCC---C---EEEEEeCCCcEEEEEC
Q psy7062 24 LVEMVAALGGYQHIRMYDFGSNNPNPV-INCEGVSKNVVEVGFQEDG---K---WMFTGGEDCRARIWDL 86 (148)
Q Consensus 24 ~~~~l~~~~~d~~v~~~d~~~~~~~~~-~~~~~~~~~i~~~~~sp~~---~---~l~~~~~~~~i~l~d~ 86 (148)
...++|++++...|-+|-+.....+.. ..-..+...|.+++|-++. . +++.++-.|.+.+|++
T Consensus 176 ~~rlIAVSsNs~~VTVFaf~l~~~r~~~~~s~~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v~~~~I 245 (717)
T PF08728_consen 176 KSRLIAVSSNSQEVTVFAFALVDERFYHVPSHQHSHNIPNVSFLDDDLDPNGHVKVVATDISGEVWTFKI 245 (717)
T ss_pred cceEEEEecCCceEEEEEEeccccccccccccccccCCCeeEeecCCCCCccceEEEEEeccCcEEEEEE
Confidence 377888866666666665543211111 1111256678888886643 2 7788899999999888
No 451
>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2.3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.
Probab=58.76 E-value=64 Score=23.05 Aligned_cols=88 Identities=11% Similarity=0.052 Sum_probs=51.8
Q ss_pred ecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----cc--------ccceEEE
Q psy7062 32 GGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-----FI--------QQVNALR 98 (148)
Q Consensus 32 ~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-----~~--------~~i~~~~ 98 (148)
=.++...+||.++- +.+.+++- ...=.+++ .|++.++..+....++++|..+. +. ..++.+.
T Consensus 107 Wk~~~~f~yd~~tl--~~~~~~~y-~~EGWGLt--~dg~~Li~SDGS~~L~~~dP~~f~~~~~i~V~~~g~pv~~LNELE 181 (264)
T PF05096_consen 107 WKEGTGFVYDPNTL--KKIGTFPY-PGEGWGLT--SDGKRLIMSDGSSRLYFLDPETFKEVRTIQVTDNGRPVSNLNELE 181 (264)
T ss_dssp SSSSEEEEEETTTT--EEEEEEE--SSS--EEE--ECSSCEEEE-SSSEEEEE-TTT-SEEEEEE-EETTEE---EEEEE
T ss_pred ecCCeEEEEccccc--eEEEEEec-CCcceEEE--cCCCEEEEECCccceEEECCcccceEEEEEEEECCEECCCcEeEE
Confidence 45678999999987 77777763 33333444 67887877777889999998776 11 4555566
Q ss_pred EccCCCEEEEEecCCceecCeeEEEeecCCCcc
Q psy7062 99 ITPDKQLLASAEELSCCYCGAAVFVYNSCYPAA 131 (148)
Q Consensus 99 ~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~ 131 (148)
|. +|...+- +.....|...|..+...
T Consensus 182 ~i-~G~IyAN------VW~td~I~~Idp~tG~V 207 (264)
T PF05096_consen 182 YI-NGKIYAN------VWQTDRIVRIDPETGKV 207 (264)
T ss_dssp EE-TTEEEEE------ETTSSEEEEEETTT-BE
T ss_pred EE-cCEEEEE------eCCCCeEEEEeCCCCeE
Confidence 64 3433322 22344677777776654
No 452
>PF14269 Arylsulfotran_2: Arylsulfotransferase (ASST)
Probab=58.67 E-value=68 Score=23.27 Aligned_cols=64 Identities=11% Similarity=0.182 Sum_probs=41.1
Q ss_pred CCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCC-CE----EEEEEccCCCEEEEEeCCCcEEEEEC
Q psy7062 21 SKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSK-NV----VEVGFQEDGKWMFTGGEDCRARIWDL 86 (148)
Q Consensus 21 ~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~-~i----~~~~~sp~~~~l~~~~~~~~i~l~d~ 86 (148)
....|++|+++-.-.+|.+.|-+++ +.+..+.+... .. ..+++-.+-+++-....++.|.+||=
T Consensus 151 ~~~~G~yLiS~R~~~~i~~I~~~tG--~I~W~lgG~~~~df~~~~~~f~~QHdar~~~~~~~~~~IslFDN 219 (299)
T PF14269_consen 151 KDDDGDYLISSRNTSTIYKIDPSTG--KIIWRLGGKRNSDFTLPATNFSWQHDARFLNESNDDGTISLFDN 219 (299)
T ss_pred ecCCccEEEEecccCEEEEEECCCC--cEEEEeCCCCCCcccccCCcEeeccCCEEeccCCCCCEEEEEcC
Confidence 3344899999666678888888888 77777765411 11 12444445555555556777778776
No 453
>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit. CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....
Probab=57.43 E-value=70 Score=23.06 Aligned_cols=63 Identities=13% Similarity=0.169 Sum_probs=41.0
Q ss_pred ccEEEEEecCCeEEEEeCCCCCCCceEEec--CCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCc
Q psy7062 25 VEMVAALGGYQHIRMYDFGSNNPNPVINCE--GVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSL 88 (148)
Q Consensus 25 ~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~--~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~ 88 (148)
+++++.|.....+.++..+... ..+..+. .....++++.+-++++.++.++.+|.+.++....
T Consensus 139 ~~~I~vgD~~~sv~~~~~~~~~-~~l~~va~d~~~~~v~~~~~l~d~~~~i~~D~~gnl~~l~~~~ 203 (321)
T PF03178_consen 139 KNYILVGDAMKSVSLLRYDEEN-NKLILVARDYQPRWVTAAEFLVDEDTIIVGDKDGNLFVLRYNP 203 (321)
T ss_dssp TTEEEEEESSSSEEEEEEETTT-E-EEEEEEESS-BEEEEEEEE-SSSEEEEEETTSEEEEEEE-S
T ss_pred ccEEEEEEcccCEEEEEEEccC-CEEEEEEecCCCccEEEEEEecCCcEEEEEcCCCeEEEEEECC
Confidence 5677887777777776554321 2233222 2356688888887768999999999999988863
No 454
>PF09826 Beta_propel: Beta propeller domain; InterPro: IPR019198 This entry consists of predicted secreted proteins containing a C-terminal beta-propeller domain distantly related to WD-40 repeats.
Probab=57.18 E-value=96 Score=24.55 Aligned_cols=97 Identities=18% Similarity=0.105 Sum_probs=61.7
Q ss_pred eEEEEeCCCCCCCceEEecC--CCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc--------ccccceEEEEcc-CCC
Q psy7062 36 HIRMYDFGSNNPNPVINCEG--VSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC--------FIQQVNALRITP-DKQ 104 (148)
Q Consensus 36 ~v~~~d~~~~~~~~~~~~~~--~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~--------~~~~i~~~~~sp-~~~ 104 (148)
.+-+.| +.. +.+..+.+ ....|.++.|--+.-+++|=-.-.-+.+.|+..+ |+-+-.+==+|| +..
T Consensus 305 ~lyVLD-~~L--~~vG~l~~la~gE~IysvRF~Gd~~Y~VTFrqvDPLfviDLsdP~~P~vlGeLKIPGfS~YLHP~~e~ 381 (521)
T PF09826_consen 305 NLYVLD-EDL--KIVGSLEGLAPGERIYSVRFMGDRAYLVTFRQVDPLFVIDLSDPANPKVLGELKIPGFSDYLHPYDEN 381 (521)
T ss_pred EEEEEC-CCC--cEeEEccccCCCceEEEEEEeCCeEEEEEEeecCceEEEECCCCCCCceeeEEECccchhceeECCCC
Confidence 355555 333 55555553 4577999999888888887655556888899876 333333334577 555
Q ss_pred EEEEEecCCce------ecCeeEEEeecCCCcceecc
Q psy7062 105 LLASAEELSCC------YCGAAVFVYNSCYPAAVVAS 135 (148)
Q Consensus 105 ~l~~~~~d~~~------~~~~~i~~~d~~~~~~~~~~ 135 (148)
+|+.-+.+..- ..+-+|.++|+..+..+...
T Consensus 382 ~LlGiG~~~~~~~~~~~~~GlKisLFDVSD~~~P~e~ 418 (521)
T PF09826_consen 382 HLLGIGKDTDEDEGTGWTQGLKISLFDVSDPANPKEL 418 (521)
T ss_pred eEEEEcccCcccccccccceeEEEEEecCCCCCccEe
Confidence 66665544422 24468999999988765443
No 455
>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A.
Probab=56.07 E-value=88 Score=23.76 Aligned_cols=85 Identities=16% Similarity=0.155 Sum_probs=40.2
Q ss_pred eEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCC----------------cEEEEECCcc----cc----
Q psy7062 36 HIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDC----------------RARIWDLSLC----FI---- 91 (148)
Q Consensus 36 ~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~----------------~i~l~d~~~~----~~---- 91 (148)
.|.-+|+.+. +...... -.....+-.++||++++.-+.|. .+.+++++.+ +.
T Consensus 265 ~i~~~d~~t~--~~~~~~~--~p~~~H~~ss~Dg~L~vGDG~d~p~~v~~~~~~~~~~~p~i~~~~~~~~~~~~l~~h~~ 340 (386)
T PF14583_consen 265 WIAGYDPDTG--ERRRLME--MPWCSHFMSSPDGKLFVGDGGDAPVDVADAGGYKIENDPWIYLFDVEAGRFRKLARHDT 340 (386)
T ss_dssp EEEEE-TTT----EEEEEE--E-SEEEEEE-TTSSEEEEEE-------------------EEEEEETTTTEEEEEEE---
T ss_pred EEEeeCCCCC--CceEEEe--CCceeeeEEcCCCCEEEecCCCCCccccccccceecCCcEEEEeccccCceeeeeeccC
Confidence 4556677776 3322222 12345666789999886644431 4556777665 11
Q ss_pred ----------ccceEEEEccCCCEEEEEecCCceecCeeEEEeecC
Q psy7062 92 ----------QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSC 127 (148)
Q Consensus 92 ----------~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~ 127 (148)
..=....|+||+++++-.|.-. +...|+.-++.
T Consensus 341 sw~v~~~~~q~~hPhp~FSPDgk~VlF~Sd~~---G~~~vY~v~i~ 383 (386)
T PF14583_consen 341 SWKVLDGDRQVTHPHPSFSPDGKWVLFRSDME---GPPAVYLVEIP 383 (386)
T ss_dssp ----BTTBSSTT----EE-TTSSEEEEEE-TT---SS-EEEEEE--
T ss_pred cceeecCCCccCCCCCccCCCCCEEEEECCCC---CCccEEEEeCc
Confidence 1235679999999777766422 24456655553
No 456
>KOG3616|consensus
Probab=52.87 E-value=68 Score=26.94 Aligned_cols=48 Identities=8% Similarity=0.045 Sum_probs=35.0
Q ss_pred CCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-------ccccceEEEEccCCC
Q psy7062 57 SKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-------FIQQVNALRITPDKQ 104 (148)
Q Consensus 57 ~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-------~~~~i~~~~~sp~~~ 104 (148)
...++++.-+|.|.-++.+..|+.+++|+.-.. ...+...+.|.-.|-
T Consensus 14 ~e~~~aiqshp~~~s~v~~~~d~si~lfn~~~r~qski~~~~~p~~nlv~tnhgl 68 (1636)
T KOG3616|consen 14 DEFTTAIQSHPGGQSFVLAHQDGSIILFNFIPRRQSKICEEAKPKENLVFTNHGL 68 (1636)
T ss_pred cceeeeeeecCCCceEEEEecCCcEEEEeecccchhhhhhhcCCccceeeeccce
Confidence 445677888899999999999999999998655 114555566654443
No 457
>PF07646 Kelch_2: Kelch motif; InterPro: IPR011498 Kelch is a 50-residue motif, named after the Drosophila mutant in which it was first identified []. This sequence motif represents one beta-sheet blade, and several of these repeats can associate to form a beta-propeller. For instance, the motif appears 6 times in Drosophila egg-chamber regulatory protein, creating a 6-bladed beta-propeller. The motif is also found in mouse protein MIPP [] and in a number of poxviruses. In addition, kelch repeats have been recognised in alpha- and beta-scruin [, ], and in galactose oxidase from the fungus Dactylium dendroides [, ]. The structure of galactose oxidase reveals that the repeated sequence corresponds to a 4-stranded anti-parallel beta-sheet motif that forms the repeat unit in a super-barrel structural fold []. The known functions of kelch-containing proteins are diverse: scruin is an actin cross-linking protein; galactose oxidase catalyses the oxidation of the hydroxyl group at the C6 position in D-galactose; neuraminidase hydrolyses sialic acid residues from glycoproteins; and kelch may have a cytoskeletal function, as it is localised to the actin-rich ring canals that connect the 15 nurse cells to the developing oocyte in Drosophila []. Nevertheless, based on the location of the kelch pattern in the catalytic unit in galactose oxidase, functionally important residues have been predicted in glyoxal oxidase []. This entry represents a type of kelch sequence motif that comprises one beta-sheet blade.; GO: 0005515 protein binding
Probab=52.77 E-value=29 Score=17.20 Aligned_cols=33 Identities=9% Similarity=0.068 Sum_probs=19.2
Q ss_pred EEccCCCEEEEEec--CCceecCeeEEEeecCCCc
Q psy7062 98 RITPDKQLLASAEE--LSCCYCGAAVFVYNSCYPA 130 (148)
Q Consensus 98 ~~sp~~~~l~~~~~--d~~~~~~~~i~~~d~~~~~ 130 (148)
+..++++.++.|+. +........+.++|..+.+
T Consensus 7 ~~~~~~kiyv~GG~~~~~~~~~~~~v~~~d~~t~~ 41 (49)
T PF07646_consen 7 AVVLDGKIYVFGGYGTDNGGSSSNDVWVFDTETNQ 41 (49)
T ss_pred EEEECCEEEEECCcccCCCCcccceeEEEECCCCE
Confidence 34457777777766 2323334457777777544
No 458
>KOG3950|consensus
Probab=52.42 E-value=76 Score=22.46 Aligned_cols=18 Identities=22% Similarity=0.444 Sum_probs=14.9
Q ss_pred CCCEEEEEEccCCCEEEE
Q psy7062 57 SKNVVEVGFQEDGKWMFT 74 (148)
Q Consensus 57 ~~~i~~~~~sp~~~~l~~ 74 (148)
...++.+++||+|+.+++
T Consensus 259 ~q~v~eiCvC~nGkLfLs 276 (292)
T KOG3950|consen 259 RQKVFEICVCPNGKLFLS 276 (292)
T ss_pred cceEEEEEEecCCcEEEe
Confidence 456899999999998875
No 459
>PF13418 Kelch_4: Galactose oxidase, central domain; PDB: 2UVK_B.
Probab=52.18 E-value=21 Score=17.55 Aligned_cols=30 Identities=7% Similarity=-0.004 Sum_probs=14.3
Q ss_pred cCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062 101 PDKQLLASAEELSCCYCGAAVFVYNSCYPA 130 (148)
Q Consensus 101 p~~~~l~~~~~d~~~~~~~~i~~~d~~~~~ 130 (148)
++++.++.|+.+........+.+||+.+.+
T Consensus 11 ~~~~i~v~GG~~~~~~~~~d~~~~d~~~~~ 40 (49)
T PF13418_consen 11 GDNSIYVFGGRDSSGSPLNDLWIFDIETNT 40 (49)
T ss_dssp -TTEEEEE--EEE-TEE---EEEEETTTTE
T ss_pred eCCeEEEECCCCCCCcccCCEEEEECCCCE
Confidence 456677777655432233457788887654
No 460
>TIGR02608 delta_60_rpt delta-60 repeat domain. This domain occurs in tandem repeats, as many as 13, in proteins from Bdellovibrio bacteriovorus, Azotobacter vinelandii, Geobacter sulfurreducens, Pirellula sp. 1, Myxococcus xanthus, and others, many of which are Deltaproteobacteria. The periodicity of the repeat ranges from about 57 to 61 amino acids, and a core region of about 54 is represented by this model and seed alignment.
Probab=51.72 E-value=33 Score=18.05 Aligned_cols=18 Identities=33% Similarity=0.423 Sum_probs=11.6
Q ss_pred EEEEEEccCCCEEEEEeC
Q psy7062 60 VVEVGFQEDGKWMFTGGE 77 (148)
Q Consensus 60 i~~~~~sp~~~~l~~~~~ 77 (148)
..++.+.|||+.++.|..
T Consensus 3 ~~~~~~q~DGkIlv~G~~ 20 (55)
T TIGR02608 3 AYAVAVQSDGKILVAGYV 20 (55)
T ss_pred eEEEEECCCCcEEEEEEe
Confidence 455666777777776653
No 461
>COG4880 Secreted protein containing C-terminal beta-propeller domain distantly related to WD-40 repeats [General function prediction only]
Probab=51.14 E-value=1.2e+02 Score=23.70 Aligned_cols=82 Identities=20% Similarity=0.133 Sum_probs=52.9
Q ss_pred CceEEecC--CCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc--------ccccceEEEEcc-C-CCEEEEEecCCce
Q psy7062 48 NPVINCEG--VSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC--------FIQQVNALRITP-D-KQLLASAEELSCC 115 (148)
Q Consensus 48 ~~~~~~~~--~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~--------~~~~i~~~~~sp-~-~~~l~~~~~d~~~ 115 (148)
+.+..+++ ...+|..+.|..|--++++=-...-+.+.|+.+. ++-+-.+-=.|| + ++.|-.|-.+|
T Consensus 416 nvvGkltGl~~gERIYAvRf~gdv~yiVTfrqtDPlfviDlsNPenPkvlGeLKIPGfS~YLHpigen~~lGvG~~~g-- 493 (603)
T COG4880 416 NVVGKLTGLAPGERIYAVRFVGDVLYIVTFRQTDPLFVIDLSNPENPKVLGELKIPGFSEYLHPIGENRLLGVGAYQG-- 493 (603)
T ss_pred cEEEEEeccCCCceEEEEEEeCceEEEEEEeccCceEEEEcCCCCCCceeEEEecCCchhhccccCCCcEEEeecccC--
Confidence 34555554 4567999999877777877666667888899776 223333333566 3 34444444444
Q ss_pred ecCeeEEEeecCCCccee
Q psy7062 116 YCGAAVFVYNSCYPAAVV 133 (148)
Q Consensus 116 ~~~~~i~~~d~~~~~~~~ 133 (148)
+-+|.++|+..+..+.
T Consensus 494 --~vKiSLFdiSdl~~Pk 509 (603)
T COG4880 494 --GVKISLFDISDLAAPK 509 (603)
T ss_pred --CceEEEEeccCCCCch
Confidence 6688999988776554
No 462
>PF08954 DUF1900: Domain of unknown function (DUF1900); InterPro: IPR015049 This domain is predominantly found in the structural protein coronin, and is duplicated in some sequences. It has no known function []. ; PDB: 2B4E_A 2AQ5_A.
Probab=50.88 E-value=62 Score=20.53 Aligned_cols=57 Identities=16% Similarity=0.149 Sum_probs=25.8
Q ss_pred eeecCcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecC--CCCCEEEEEEcc
Q psy7062 9 LTAFGQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEG--VSKNVVEVGFQE 67 (148)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~--~~~~i~~~~~sp 67 (148)
-...+.-..-||++. +-++++|-.|++|+.|.+.... ..+..+.. ......++++-|
T Consensus 8 D~s~g~L~P~yD~dt-~llyl~gKGD~~ir~yEv~~~~-p~l~~l~~~~s~~~~~G~~~lP 66 (136)
T PF08954_consen 8 DTSSGVLMPFYDEDT-NLLYLAGKGDGNIRYYEVSDES-PYLHYLSEYRSPEPQKGFAFLP 66 (136)
T ss_dssp ---SS-EEEEE-TTT--EEEEEETT-S-EEEEEE-SST-TSEEEEEEE--SS--SEEEE--
T ss_pred cCCCceeEeeEcCCC-CEEEEEeccCcEEEEEEEcCCC-CceEEccccccCCCeEeeEecC
Confidence 344556677788884 3444454577899999997652 23333322 344455666666
No 463
>KOG0379|consensus
Probab=48.20 E-value=1.3e+02 Score=23.45 Aligned_cols=104 Identities=12% Similarity=0.043 Sum_probs=53.2
Q ss_pred ccEEEEEecCC------eEEEEeCCCCCCCceEEecC-CCCCEEEEEEccCCCEEEEEeCC------CcEEEEECCcc--
Q psy7062 25 VEMVAALGGYQ------HIRMYDFGSNNPNPVINCEG-VSKNVVEVGFQEDGKWMFTGGED------CRARIWDLSLC-- 89 (148)
Q Consensus 25 ~~~l~~~~~d~------~v~~~d~~~~~~~~~~~~~~-~~~~i~~~~~sp~~~~l~~~~~~------~~i~l~d~~~~-- 89 (148)
..+++-|+.+. .+..+|+.+.....+..... ........+...+.+.++.|+.+ ..++++|+.+.
T Consensus 123 ~~l~lfGG~~~~~~~~~~l~~~d~~t~~W~~l~~~~~~P~~r~~Hs~~~~g~~l~vfGG~~~~~~~~ndl~i~d~~~~~W 202 (482)
T KOG0379|consen 123 DKLYLFGGTDKKYRNLNELHSLDLSTRTWSLLSPTGDPPPPRAGHSATVVGTKLVVFGGIGGTGDSLNDLHIYDLETSTW 202 (482)
T ss_pred CeEEEEccccCCCCChhheEeccCCCCcEEEecCcCCCCCCcccceEEEECCEEEEECCccCcccceeeeeeeccccccc
Confidence 35556656664 78888998873222222221 12222223333344555555543 45788888876
Q ss_pred --cc------ccceE-EEEccCCCEEEEEecC-CceecCeeEEEeecCCC
Q psy7062 90 --FI------QQVNA-LRITPDKQLLASAEEL-SCCYCGAAVFVYNSCYP 129 (148)
Q Consensus 90 --~~------~~i~~-~~~sp~~~~l~~~~~d-~~~~~~~~i~~~d~~~~ 129 (148)
+. .+... ....-+.++++.++.+ +..+. ..+.++|+.+-
T Consensus 203 ~~~~~~g~~P~pR~gH~~~~~~~~~~v~gG~~~~~~~l-~D~~~ldl~~~ 251 (482)
T KOG0379|consen 203 SELDTQGEAPSPRYGHAMVVVGNKLLVFGGGDDGDVYL-NDVHILDLSTW 251 (482)
T ss_pred eecccCCCCCCCCCCceEEEECCeEEEEeccccCCcee-cceEeeecccc
Confidence 11 11111 1112255666666665 33222 35778887763
No 464
>KOG2280|consensus
Probab=47.29 E-value=1.7e+02 Score=24.48 Aligned_cols=71 Identities=11% Similarity=0.179 Sum_probs=43.4
Q ss_pred eEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc--------cc---ccceEEEEccCCC
Q psy7062 36 HIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC--------FI---QQVNALRITPDKQ 104 (148)
Q Consensus 36 ~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~--------~~---~~i~~~~~sp~~~ 104 (148)
.|++|+.... .+....-....+.++.|+.+... +....+|++++|++... +. ..|....+..+|=
T Consensus 65 ~I~If~~sG~---lL~~~~w~~~~lI~mgWs~~eeL-I~v~k~g~v~Vy~~~ge~ie~~svg~e~~~~~I~ec~~f~~GV 140 (829)
T KOG2280|consen 65 YIRIFNISGQ---LLGRILWKHGELIGMGWSDDEEL-ICVQKDGTVHVYGLLGEFIESNSVGFESQMSDIVECRFFHNGV 140 (829)
T ss_pred eEEEEecccc---chHHHHhcCCCeeeecccCCceE-EEEeccceEEEeecchhhhcccccccccccCceeEEEEecCce
Confidence 5888888653 44333222337779999887664 45668999999999654 12 3455554444554
Q ss_pred EEEEEe
Q psy7062 105 LLASAE 110 (148)
Q Consensus 105 ~l~~~~ 110 (148)
.+++.+
T Consensus 141 avlt~~ 146 (829)
T KOG2280|consen 141 AVLTVS 146 (829)
T ss_pred EEEecC
Confidence 444443
No 465
>TIGR03032 conserved hypothetical protein TIGR03032. This protein family is uncharacterized. A number of motifs are conserved perfectly among all member sequences. The function of this protein is unknown.
Probab=47.20 E-value=1.2e+02 Score=22.57 Aligned_cols=41 Identities=10% Similarity=-0.011 Sum_probs=30.2
Q ss_pred CCCEEEEEeCCCcEEEEECCcc-------ccccceEEEEccCCCEEEEEe
Q psy7062 68 DGKWMFTGGEDCRARIWDLSLC-------FIQQVNALRITPDKQLLASAE 110 (148)
Q Consensus 68 ~~~~l~~~~~~~~i~l~d~~~~-------~~~~i~~~~~sp~~~~l~~~~ 110 (148)
+|+..++-+..+.+.-+|..++ +.+....+.|. |++++++-
T Consensus 212 dgrLwvldsgtGev~~vD~~~G~~e~Va~vpG~~rGL~f~--G~llvVgm 259 (335)
T TIGR03032 212 QGKLWLLNSGRGELGYVDPQAGKFQPVAFLPGFTRGLAFA--GDFAFVGL 259 (335)
T ss_pred CCeEEEEECCCCEEEEEcCCCCcEEEEEECCCCCccccee--CCEEEEEe
Confidence 5777788888888999998766 22777888886 77666653
No 466
>COG3823 Glutamine cyclotransferase [Posttranslational modification, protein turnover, chaperones]
Probab=46.07 E-value=1e+02 Score=21.57 Aligned_cols=94 Identities=16% Similarity=0.198 Sum_probs=50.8
Q ss_pred ccEEEEEecCC--eEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEe-CCCcEEEEECCcc-----c--cccc
Q psy7062 25 VEMVAALGGYQ--HIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGG-EDCRARIWDLSLC-----F--IQQV 94 (148)
Q Consensus 25 ~~~l~~~~~d~--~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~-~~~~i~l~d~~~~-----~--~~~i 94 (148)
+.++.+.+.-+ .|++||+.++ +.+..-.-....+.+-..-.-|..+..-. .++.-..+|..+. + ++.-
T Consensus 56 g~i~esTG~yg~S~ir~~~L~~g--q~~~s~~l~~~~~FgEGit~~gd~~y~LTw~egvaf~~d~~t~~~lg~~~y~GeG 133 (262)
T COG3823 56 GHILESTGLYGFSKIRVSDLTTG--QEIFSEKLAPDTVFGEGITKLGDYFYQLTWKEGVAFKYDADTLEELGRFSYEGEG 133 (262)
T ss_pred CEEEEeccccccceeEEEeccCc--eEEEEeecCCccccccceeeccceEEEEEeccceeEEEChHHhhhhcccccCCcc
Confidence 45566655443 7999999988 44443322222232222222244333322 4678888888776 2 2555
Q ss_pred eEEEEccCCCEEEEEecCCceecCeeEEEeecCC
Q psy7062 95 NALRITPDKQLLASAEELSCCYCGAAVFVYNSCY 128 (148)
Q Consensus 95 ~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~ 128 (148)
+.++- |+..|+.++. ..++++-|..+
T Consensus 134 WgLt~--d~~~LimsdG------satL~frdP~t 159 (262)
T COG3823 134 WGLTS--DDKNLIMSDG------SATLQFRDPKT 159 (262)
T ss_pred eeeec--CCcceEeeCC------ceEEEecCHHH
Confidence 66654 5555666554 33666666543
No 467
>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex. Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm
Probab=45.69 E-value=1.3e+02 Score=22.83 Aligned_cols=45 Identities=7% Similarity=0.148 Sum_probs=32.6
Q ss_pred CCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----cc----ccceEEEEccC
Q psy7062 58 KNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-----FI----QQVNALRITPD 102 (148)
Q Consensus 58 ~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-----~~----~~i~~~~~sp~ 102 (148)
+.+..+++||+++.++.-..+|.+.+.+..-. +. .....+.|.-+
T Consensus 217 ~~i~~iavSpng~~iAl~t~~g~l~v~ssDf~~~~~e~~~~~~~~p~~~~WCG~ 270 (410)
T PF04841_consen 217 GPIIKIAVSPNGKFIALFTDSGNLWVVSSDFSEKLCEFDTDSKSPPKQMAWCGN 270 (410)
T ss_pred CCeEEEEECCCCCEEEEEECCCCEEEEECcccceeEEeecCcCCCCcEEEEECC
Confidence 57999999999999988888898888765322 11 45556666544
No 468
>PF11635 Med16: Mediator complex subunit 16; InterPro: IPR021665 Mediator is a large complex of up to 33 proteins that is conserved from plants through fungi to humans - the number and representation of individual subunits varying with species [],[]. It is arranged into four different sections, a core, a head, a tail and a kinase-activity part, and the number of subunits within each of these is what varies with species. Overall, Mediator regulates the transcriptional activity of RNA polymerase II but it would appear that each of the four different sections has a slightly different function. Med16 is one of the subunits of the Tail portion of the Mediator complex and is required for lipopolysaccharide gene-expression []. Several members including the human protein, Q9Y2X0 from SWISSPROT, have one or more WD40 domains on them, PF00400 from PFAM.
Probab=44.88 E-value=1.6e+02 Score=24.52 Aligned_cols=66 Identities=15% Similarity=0.041 Sum_probs=41.1
Q ss_pred EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEe-c--CCC----------------CCEEEEEEccCCCEEEEE
Q psy7062 15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINC-E--GVS----------------KNVVEVGFQEDGKWMFTG 75 (148)
Q Consensus 15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~-~--~~~----------------~~i~~~~~sp~~~~l~~~ 75 (148)
...+++....+.+++....||+|.++|-.+. +.+... . ... ..+.-++|||.+..++.-
T Consensus 261 ~V~si~~~~~~~~v~~~~~DGsI~~~dr~t~--~~~~~~~~~~~~~~~v~s~~~~Gf~fp~~~~~~~vafSPt~c~~v~~ 338 (753)
T PF11635_consen 261 RVVSITSPELDIVVAFAFSDGSIEFRDRNTM--KELNETRTNGEPPNTVTSLFQAGFHFPCIQPPLHVAFSPTMCSLVQI 338 (753)
T ss_pred eEEEEEecccCcEEEEEEcCCeEEEEecCcc--hhhcccccccCCccccccccccccccccCCCCceEEECcccceEEEE
Confidence 4556665556778888899999999999877 333222 0 000 122335677777766666
Q ss_pred eCCCcEE
Q psy7062 76 GEDCRAR 82 (148)
Q Consensus 76 ~~~~~i~ 82 (148)
..++.+.
T Consensus 339 ~~~~~~~ 345 (753)
T PF11635_consen 339 DEDGKTK 345 (753)
T ss_pred ecCCCce
Confidence 6666644
No 469
>KOG3616|consensus
Probab=44.50 E-value=39 Score=28.25 Aligned_cols=71 Identities=11% Similarity=0.239 Sum_probs=51.5
Q ss_pred CCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----ccccceEEEEccCCCEEEEEecCCceecCeeEEEe-ecCCC
Q psy7062 55 GVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC----FIQQVNALRITPDKQLLASAEELSCCYCGAAVFVY-NSCYP 129 (148)
Q Consensus 55 ~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~----~~~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~-d~~~~ 129 (148)
.|.+.|-=+.++-.+..++..+..-.++++|+.+- +-.-+.-+.|-|....++.-+.|. +.+| ++..|
T Consensus 335 nh~~~vdwielne~~~kllfrdkk~kl~l~di~s~qksmilnfcsymqwvp~sdvivaqn~dn-------l~iwyn~d~p 407 (1636)
T KOG3616|consen 335 NHEGAVDWIELNERAHKLLFRDKKLKLHLVDIESCQKSMILNFCSYMQWVPGSDVIVAQNGDN-------LCIWYNIDAP 407 (1636)
T ss_pred cccccccceeccchhhhhhcccccceeEEEEcccchHHHHHHHhhhheeccCcceEEecCCCc-------eEEEecCCcc
Confidence 47777777777777788888888889999999876 224455678999988887776654 5555 55555
Q ss_pred cce
Q psy7062 130 AAV 132 (148)
Q Consensus 130 ~~~ 132 (148)
..+
T Consensus 408 eqv 410 (1636)
T KOG3616|consen 408 EQV 410 (1636)
T ss_pred hhh
Confidence 443
No 470
>KOG2377|consensus
Probab=42.39 E-value=1.7e+02 Score=23.11 Aligned_cols=94 Identities=11% Similarity=0.142 Sum_probs=57.8
Q ss_pred cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCc--eEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc--
Q psy7062 14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNP--VINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-- 89 (148)
Q Consensus 14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~--~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-- 89 (148)
.....|+++ .+.+|+--.+.+|.+++...-.... ....+..+..|.++.|+.+... +..+.. -+-+|-....
T Consensus 69 I~SIkFSlD--nkilAVQR~~~~v~f~nf~~d~~~l~~~~~ck~k~~~IlGF~W~~s~e~-A~i~~~-G~e~y~v~pekr 144 (657)
T KOG2377|consen 69 IKSIKFSLD--NKILAVQRTSKTVDFCNFIPDNSQLEYTQECKTKNANILGFCWTSSTEI-AFITDQ-GIEFYQVLPEKR 144 (657)
T ss_pred eeEEEeccC--cceEEEEecCceEEEEecCCCchhhHHHHHhccCcceeEEEEEecCeeE-EEEecC-CeEEEEEchhhh
Confidence 346677777 7888887788899999884331111 2233334456889999887443 333322 3555544333
Q ss_pred -c---c---ccceEEEEccCCCEEEEEec
Q psy7062 90 -F---I---QQVNALRITPDKQLLASAEE 111 (148)
Q Consensus 90 -~---~---~~i~~~~~sp~~~~l~~~~~ 111 (148)
+ + ..+....|.++.+.++.++.
T Consensus 145 slRlVks~~~nvnWy~yc~et~v~LL~t~ 173 (657)
T KOG2377|consen 145 SLRLVKSHNLNVNWYMYCPETAVILLSTT 173 (657)
T ss_pred hhhhhhhcccCccEEEEccccceEeeecc
Confidence 1 1 67888899998886555543
No 471
>KOG2247|consensus
Probab=41.50 E-value=8.9 Score=29.85 Aligned_cols=91 Identities=10% Similarity=0.149 Sum_probs=57.8
Q ss_pred EEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc---cc-
Q psy7062 16 STVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC---FI- 91 (148)
Q Consensus 16 ~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~---~~- 91 (148)
..+||..+ ..+++.+-..+.+.+||+.+...+.+..--.|.. .-+.|++.+..++.+...+.+.+++-... ..
T Consensus 79 dm~wDkeg-dvlavlAek~~piylwd~n~eytqqLE~gg~~s~--sll~wsKg~~el~ig~~~gn~viynhgtsR~iiv~ 155 (615)
T KOG2247|consen 79 DMAWDKEG-DVLAVLAEKTGPIYLWDVNSEYTQQLESGGTSSK--SLLAWSKGTPELVIGNNAGNIVIYNHGTSRRIIVM 155 (615)
T ss_pred hhhhcccc-chhhhhhhcCCCeeechhhhhhHHHHhccCcchH--HHHhhccCCccccccccccceEEEeccchhhhhhh
Confidence 34555542 2333333566789999998752111111111222 23789999999999988899999998765 11
Q ss_pred ----ccceEEEEccCCCEEEEE
Q psy7062 92 ----QQVNALRITPDKQLLASA 109 (148)
Q Consensus 92 ----~~i~~~~~sp~~~~l~~~ 109 (148)
.++.+.+|.+.+..+...
T Consensus 156 Gkh~RRgtq~av~lEd~vil~d 177 (615)
T KOG2247|consen 156 GKHQRRGTQIAVTLEDYVILCD 177 (615)
T ss_pred cccccceeEEEecccceeeecC
Confidence 678889998877765443
No 472
>COG5276 Uncharacterized conserved protein [Function unknown]
Probab=41.42 E-value=1.4e+02 Score=22.01 Aligned_cols=103 Identities=12% Similarity=0.126 Sum_probs=64.2
Q ss_pred EEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceE-EecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----c
Q psy7062 16 STVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVI-NCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC----F 90 (148)
Q Consensus 16 ~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~-~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~----~ 90 (148)
...++-. |++..++..+.-..+.|+.++....+. ...........+++ .|++...+.+|+-+.+-|+..+ |
T Consensus 131 aygv~vs--Gn~aYVadlddgfLivdvsdpssP~lagrya~~~~d~~~v~I--SGn~AYvA~~d~GL~ivDVSnp~sPvl 206 (370)
T COG5276 131 AYGVYVS--GNYAYVADLDDGFLIVDVSDPSSPQLAGRYALPGGDTHDVAI--SGNYAYVAWRDGGLTIVDVSNPHSPVL 206 (370)
T ss_pred EEEEEec--CCEEEEeeccCcEEEEECCCCCCceeeeeeccCCCCceeEEE--ecCeEEEEEeCCCeEEEEccCCCCCeE
Confidence 3344444 788888665666777788876323332 33322333333433 5778888889999999999776 3
Q ss_pred c-----c-cceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062 91 I-----Q-QVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA 130 (148)
Q Consensus 91 ~-----~-~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~ 130 (148)
. + .+..+..+++..+++...+ -+.+-|...++
T Consensus 207 i~~~n~g~g~~sv~vsdnr~y~vvy~e--------gvlivd~s~~s 244 (370)
T COG5276 207 IGSYNTGPGTYSVSVSDNRAYLVVYDE--------GVLIVDVSGPS 244 (370)
T ss_pred EEEEecCCceEEEEecCCeeEEEEccc--------ceEEEecCCCC
Confidence 2 3 6777777777777766654 35555555544
No 473
>TIGR02171 Fb_sc_TIGR02171 Fibrobacter succinogenes paralogous family TIGR02171. This model describes a paralogous family of the rumen bacterium Fibrobacter succinogenes. Eleven members are found in Fibrobacter succinogenes S85, averaging over 900 amino acids in length. More than half are predicted lipoproteins. The function is unknown.
Probab=41.21 E-value=1e+02 Score=26.22 Aligned_cols=50 Identities=18% Similarity=0.038 Sum_probs=32.1
Q ss_pred CcEEEEECCcc----c--c--ccceEEEEccCCCEEEE-EecCCceecCeeEEEeecCCC
Q psy7062 79 CRARIWDLSLC----F--I--QQVNALRITPDKQLLAS-AEELSCCYCGAAVFVYNSCYP 129 (148)
Q Consensus 79 ~~i~l~d~~~~----~--~--~~i~~~~~sp~~~~l~~-~~~d~~~~~~~~i~~~d~~~~ 129 (148)
+.+.+-|.... + . .++.+-.|||||++|+- .+.++ +.+...|++-|+.+.
T Consensus 329 ~~L~~~D~dG~n~~~ve~~~~~~i~sP~~SPDG~~vAY~ts~e~-~~g~s~vYv~~L~t~ 387 (912)
T TIGR02171 329 GNLAYIDYTKGASRAVEIEDTISVYHPDISPDGKKVAFCTGIEG-LPGKSSVYVRNLNAS 387 (912)
T ss_pred CeEEEEecCCCCceEEEecCCCceecCcCCCCCCEEEEEEeecC-CCCCceEEEEehhcc
Confidence 45556565443 2 1 66778899999999988 43322 222446888887754
No 474
>KOG1900|consensus
Probab=41.12 E-value=2.6e+02 Score=25.07 Aligned_cols=79 Identities=15% Similarity=0.306 Sum_probs=46.9
Q ss_pred ecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEE-ccCC-------CEEEEEeCCCcEEEEECC----cc--------cc
Q psy7062 32 GGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGF-QEDG-------KWMFTGGEDCRARIWDLS----LC--------FI 91 (148)
Q Consensus 32 ~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~-sp~~-------~~l~~~~~~~~i~l~d~~----~~--------~~ 91 (148)
+-|+.+.+|+.++. .....+.+-...|..+.+ .|.. ++++.....-.+.++-+. +. |.
T Consensus 96 TiDn~L~lWny~~~--~e~~~~d~~shtIl~V~LvkPkpgvFv~~IqhlLvvaT~~ei~ilgV~~~~~~~~~~~f~~~~~ 173 (1311)
T KOG1900|consen 96 TIDNNLFLWNYESD--NELAEYDGLSHTILKVGLVKPKPGVFVPEIQHLLVVATPVEIVILGVSFDEFTGELSIFNTSFK 173 (1311)
T ss_pred EeCCeEEEEEcCCC--CccccccchhhhheeeeeecCCCCcchhhhheeEEecccceEEEEEEEeccccCccccccccee
Confidence 45889999999986 566666665666666653 3332 333333333344444331 11 22
Q ss_pred -----ccceEEEEccCCCEEEEEecC
Q psy7062 92 -----QQVNALRITPDKQLLASAEEL 112 (148)
Q Consensus 92 -----~~i~~~~~sp~~~~l~~~~~d 112 (148)
..+.++....+|+.+++|-.+
T Consensus 174 i~~dg~~V~~I~~t~nGRIF~~G~dg 199 (1311)
T KOG1900|consen 174 ISVDGVSVNCITYTENGRIFFAGRDG 199 (1311)
T ss_pred eecCCceEEEEEeccCCcEEEeecCC
Confidence 557788877899987776543
No 475
>KOG4460|consensus
Probab=40.88 E-value=1.9e+02 Score=23.28 Aligned_cols=66 Identities=18% Similarity=0.149 Sum_probs=42.1
Q ss_pred CCCccEEEEEecCCeEEEEeCC---------CCCCCceEEec-----------CCCCCEEEEEEccCC---CEEEEEeCC
Q psy7062 22 KHLVEMVAALGGYQHIRMYDFG---------SNNPNPVINCE-----------GVSKNVVEVGFQEDG---KWMFTGGED 78 (148)
Q Consensus 22 ~~~~~~l~~~~~d~~v~~~d~~---------~~~~~~~~~~~-----------~~~~~i~~~~~sp~~---~~l~~~~~~ 78 (148)
+..|..++.++.+|.+.|+-.+ .+ +....++ ...-.+...+|+|+. ..+..-+.|
T Consensus 112 s~~GS~VaL~G~~Gi~vMeLp~rwG~~s~~eDg--k~~v~CRt~~i~~~~ftss~~ltl~Qa~WHP~S~~D~hL~iL~sd 189 (741)
T KOG4460|consen 112 SPTGSHVALIGIKGLMVMELPKRWGKNSEFEDG--KSTVNCRTTPVAERFFTSSTSLTLKQAAWHPSSILDPHLVLLTSD 189 (741)
T ss_pred cCCCceEEEecCCeeEEEEchhhcCccceecCC--CceEEEEeecccceeeccCCceeeeeccccCCccCCceEEEEecC
Confidence 3447788887888877775522 22 2211111 011235667899976 577778889
Q ss_pred CcEEEEECCcc
Q psy7062 79 CRARIWDLSLC 89 (148)
Q Consensus 79 ~~i~l~d~~~~ 89 (148)
+.+++||+...
T Consensus 190 nviRiy~lS~~ 200 (741)
T KOG4460|consen 190 NVIRIYSLSEP 200 (741)
T ss_pred cEEEEEecCCc
Confidence 99999999765
No 476
>COG4257 Vgb Streptogramin lyase [Defense mechanisms]
Probab=40.79 E-value=1.4e+02 Score=21.81 Aligned_cols=101 Identities=12% Similarity=-0.026 Sum_probs=61.1
Q ss_pred ccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----cc-------cc
Q psy7062 25 VEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC----FI-------QQ 93 (148)
Q Consensus 25 ~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~----~~-------~~ 93 (148)
|..-.++...+.+=-.|..++ +.....-+.....-.+..-|||...++-+.. .|.-.|-++. |. ..
T Consensus 73 G~VWft~qg~gaiGhLdP~tG--ev~~ypLg~Ga~Phgiv~gpdg~~Witd~~~-aI~R~dpkt~evt~f~lp~~~a~~n 149 (353)
T COG4257 73 GAVWFTAQGTGAIGHLDPATG--EVETYPLGSGASPHGIVVGPDGSAWITDTGL-AIGRLDPKTLEVTRFPLPLEHADAN 149 (353)
T ss_pred CceEEecCccccceecCCCCC--ceEEEecCCCCCCceEEECCCCCeeEecCcc-eeEEecCcccceEEeecccccCCCc
Confidence 555556555556666677777 5444434455556677788988855554333 4555566555 22 66
Q ss_pred ceEEEEccCCCEEEEEecCC--ce-ecCeeEEEeecCC
Q psy7062 94 VNALRITPDKQLLASAEELS--CC-YCGAAVFVYNSCY 128 (148)
Q Consensus 94 i~~~~~sp~~~~l~~~~~d~--~~-~~~~~i~~~d~~~ 128 (148)
.....|.+.|+..+++...- .+ .....|++|+...
T Consensus 150 let~vfD~~G~lWFt~q~G~yGrLdPa~~~i~vfpaPq 187 (353)
T COG4257 150 LETAVFDPWGNLWFTGQIGAYGRLDPARNVISVFPAPQ 187 (353)
T ss_pred ccceeeCCCccEEEeeccccceecCcccCceeeeccCC
Confidence 77788999998887775311 11 1234577887653
No 477
>PF12768 Rax2: Cortical protein marker for cell polarity
Probab=40.08 E-value=1.1e+02 Score=22.07 Aligned_cols=52 Identities=13% Similarity=0.078 Sum_probs=34.1
Q ss_pred CcEEEEECCcc--------ccccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062 79 CRARIWDLSLC--------FIQQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA 130 (148)
Q Consensus 79 ~~i~l~d~~~~--------~~~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~ 130 (148)
..+.+||.... +.+.|..+.|..+.+.++.|...-.-.....+..||..+.+
T Consensus 16 ~~lC~yd~~~~qW~~~g~~i~G~V~~l~~~~~~~Llv~G~ft~~~~~~~~la~yd~~~~~ 75 (281)
T PF12768_consen 16 PGLCLYDTDNSQWSSPGNGISGTVTDLQWASNNQLLVGGNFTLNGTNSSNLATYDFKNQT 75 (281)
T ss_pred CEEEEEECCCCEeecCCCCceEEEEEEEEecCCEEEEEEeeEECCCCceeEEEEecCCCe
Confidence 35888998766 23789999998777777777531111124467788876543
No 478
>PF10584 Proteasome_A_N: Proteasome subunit A N-terminal signature; InterPro: IPR000426 The proteasome (or macropain) (3.4.25.1 from EC) [, , , , ] is a eukaryotic and archaeal multicatalytic proteinase complex that seems to be involved in an ATP/ubiquitin-dependent nonlysosomal proteolytic pathway. In eukaryotes the proteasome is composed of about 28 distinct subunits which form a highly ordered ring-shaped structure (20S ring) of about 700 kDa. Most proteasome subunits can be classified, on the basis on sequence similarities into two groups, alpha (A) and beta (B). This family contains the alpha subunit sequences which range from 210 to 290 amino acids. These sequences are classified as non-peptidase homologues in MEROPS peptidase family T1 (clan PB(T)). ; GO: 0004175 endopeptidase activity, 0006511 ubiquitin-dependent protein catabolic process, 0019773 proteasome core complex, alpha-subunit complex; PDB: 3H4P_M 1IRU_O 3UN4_U 1FNT_A 3OEV_G 3OEU_U 3SDK_U 3DY3_G 3MG7_G 3L5Q_C ....
Probab=39.55 E-value=6.4 Score=16.77 Aligned_cols=6 Identities=33% Similarity=0.844 Sum_probs=2.8
Q ss_pred EccCCC
Q psy7062 99 ITPDKQ 104 (148)
Q Consensus 99 ~sp~~~ 104 (148)
|||+|+
T Consensus 8 FSp~Gr 13 (23)
T PF10584_consen 8 FSPDGR 13 (23)
T ss_dssp BBTTSS
T ss_pred ECCCCe
Confidence 445444
No 479
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=36.15 E-value=2.5e+02 Score=23.18 Aligned_cols=55 Identities=13% Similarity=0.084 Sum_probs=39.9
Q ss_pred CEEEEEEccCCCEEEEE-----eCCCcEEEEECCcc--cc----ccceEEEEccCCCEEEEEecCC
Q psy7062 59 NVVEVGFQEDGKWMFTG-----GEDCRARIWDLSLC--FI----QQVNALRITPDKQLLASAEELS 113 (148)
Q Consensus 59 ~i~~~~~sp~~~~l~~~-----~~~~~i~l~d~~~~--~~----~~i~~~~~sp~~~~l~~~~~d~ 113 (148)
.+-.++.|||+++++-+ +..-++++-|+.++ +. .-...++|.+|++.|.-...|.
T Consensus 130 ~Lg~~~~s~D~~~la~s~D~~G~e~y~lr~kdL~tg~~~~d~i~~~~~~~~Wa~d~~~lfYt~~d~ 195 (682)
T COG1770 130 SLGAASISPDHNLLAYSVDVLGDEQYTLRFKDLATGEELPDEITNTSGSFAWAADGKTLFYTRLDE 195 (682)
T ss_pred eeeeeeeCCCCceEEEEEecccccEEEEEEEecccccccchhhcccccceEEecCCCeEEEEEEcC
Confidence 35677889999987654 33357999999998 22 3366789999998777766555
No 480
>KOG0918|consensus
Probab=35.14 E-value=96 Score=23.80 Aligned_cols=34 Identities=12% Similarity=0.228 Sum_probs=28.2
Q ss_pred CCCCEEEEEEccCCCEEEEEeC-CCcEEEEECCcc
Q psy7062 56 VSKNVVEVGFQEDGKWMFTGGE-DCRARIWDLSLC 89 (148)
Q Consensus 56 ~~~~i~~~~~sp~~~~l~~~~~-~~~i~l~d~~~~ 89 (148)
-.+-|+.+-+|-|.+++..+.+ .|-|+-||+...
T Consensus 310 MP~LITDilISmDDRFLYvs~WLHGDirQYdIsDP 344 (476)
T KOG0918|consen 310 MPGLITDILISLDDRFLYVSNWLHGDIRQYDISDP 344 (476)
T ss_pred cchhhheeEEeecCcEEEEEeeeecceeeeccCCC
Confidence 3567899999999999988877 578999999766
No 481
>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.
Probab=34.48 E-value=2.3e+02 Score=22.41 Aligned_cols=63 Identities=13% Similarity=0.102 Sum_probs=39.4
Q ss_pred ccEEEEEecCCeEEEEeCCCCCCCceEEecCCC-CCEEE---EE-----EccCCCEEEEEeCCCcEEEEECCcc
Q psy7062 25 VEMVAALGGYQHIRMYDFGSNNPNPVINCEGVS-KNVVE---VG-----FQEDGKWMFTGGEDCRARIWDLSLC 89 (148)
Q Consensus 25 ~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~-~~i~~---~~-----~sp~~~~l~~~~~~~~i~l~d~~~~ 89 (148)
+..++.++.++.|.-.|.+++ +.+..+.... ..+.. .. ..-.+..++.++.++.+.-+|.+++
T Consensus 69 ~g~vyv~s~~g~v~AlDa~TG--k~lW~~~~~~~~~~~~~~~~~~~~rg~av~~~~v~v~t~dg~l~ALDa~TG 140 (527)
T TIGR03075 69 DGVMYVTTSYSRVYALDAKTG--KELWKYDPKLPDDVIPVMCCDVVNRGVALYDGKVFFGTLDARLVALDAKTG 140 (527)
T ss_pred CCEEEEECCCCcEEEEECCCC--ceeeEecCCCCcccccccccccccccceEECCEEEEEcCCCEEEEEECCCC
Confidence 445566577888999999998 6666654211 11111 00 0112345667788999999999888
No 482
>PF13964 Kelch_6: Kelch motif
Probab=34.20 E-value=64 Score=15.86 Aligned_cols=30 Identities=7% Similarity=-0.100 Sum_probs=18.5
Q ss_pred cCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062 101 PDKQLLASAEELSCCYCGAAVFVYNSCYPA 130 (148)
Q Consensus 101 p~~~~l~~~~~d~~~~~~~~i~~~d~~~~~ 130 (148)
-+++..+.|+.+........+.+||+.+.+
T Consensus 10 ~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~ 39 (50)
T PF13964_consen 10 VGGKIYVFGGYDNSGKYSNDVERYDPETNT 39 (50)
T ss_pred ECCEEEEECCCCCCCCccccEEEEcCCCCc
Confidence 366666666654423334568888888654
No 483
>PF08309 LVIVD: LVIVD repeat; InterPro: IPR013211 This repeat is found in bacterial and archaeal cell surface proteins, many of which are hypothetical. The secondary structure corresponding to this repeat is predicted to comprise 4 beta-strands, which may associate to form a beta-propeller. The repeat copy number varies from 2-14. This repeat is sometimes found with the PKD domain IPR000601 from INTERPRO.
Probab=33.72 E-value=65 Score=15.78 Aligned_cols=27 Identities=11% Similarity=0.128 Sum_probs=16.7
Q ss_pred CCCEEEEEecCCceecCeeEEEeecCCCcceec
Q psy7062 102 DKQLLASAEELSCCYCGAAVFVYNSCYPAAVVA 134 (148)
Q Consensus 102 ~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~ 134 (148)
.|.++..+..++ -+.+.|+.++..+..
T Consensus 10 ~g~yaYva~~~~------Gl~IvDISnPs~P~~ 36 (42)
T PF08309_consen 10 SGNYAYVADGNN------GLVIVDISNPSNPVL 36 (42)
T ss_pred ECCEEEEEeCCC------CEEEEECCCCCCCEE
Confidence 455555554322 488889888876653
No 484
>COG5308 NUP170 Nuclear pore complex subunit [Intracellular trafficking and secretion]
Probab=33.36 E-value=1.7e+02 Score=25.21 Aligned_cols=80 Identities=10% Similarity=0.230 Sum_probs=43.0
Q ss_pred ecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEE-ccCCCE------------------EEEEeCC---CcEEEEECCcc
Q psy7062 32 GGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGF-QEDGKW------------------MFTGGED---CRARIWDLSLC 89 (148)
Q Consensus 32 ~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~-sp~~~~------------------l~~~~~~---~~i~l~d~~~~ 89 (148)
+.|+.+.+||..+. +....+......|..+++ .|..+. ++..+.| +.+.+++..-.
T Consensus 99 T~dnkLiLWnynn~--neyq~idd~shtIlkVkLvrPkantFvs~i~hlL~vAT~~e~~ilgvs~d~~T~Els~fnTgl~ 176 (1263)
T COG5308 99 TNDNKLILWNYNNS--NEYQEIDDFSHTILKVKLVRPKANTFVSRISHLLFVATEKEVMILGVSKDTKTGELSLFNTGLV 176 (1263)
T ss_pred EcCCEEEEEecCCC--cchhhhhhhhhheeEEEEeccCCcccHHhhhhhhhhhhhheeeEEEEEeccccceeEEEecceE
Confidence 56889999999976 333333322333333332 343322 2222322 23444433222
Q ss_pred --cc-ccceEEEEccCCCEEEEEecCC
Q psy7062 90 --FI-QQVNALRITPDKQLLASAEELS 113 (148)
Q Consensus 90 --~~-~~i~~~~~sp~~~~l~~~~~d~ 113 (148)
.+ ..+.|+.-+.+|+.+++|..|.
T Consensus 177 vsvqGinV~civs~e~GrIFf~g~~d~ 203 (1263)
T COG5308 177 VSVQGINVRCIVSEEDGRIFFGGENDP 203 (1263)
T ss_pred EeccCceeEEEEeccCCcEEEecCCCC
Confidence 22 5577777777999999888753
No 485
>KOG1900|consensus
Probab=33.35 E-value=3.6e+02 Score=24.24 Aligned_cols=34 Identities=6% Similarity=0.176 Sum_probs=29.9
Q ss_pred CCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCc
Q psy7062 55 GVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSL 88 (148)
Q Consensus 55 ~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~ 88 (148)
.+...|..+.+...-..+.+-+..+++..||+..
T Consensus 240 ~~~dpI~qi~ID~SR~IlY~lsek~~v~~Y~i~~ 273 (1311)
T KOG1900|consen 240 SSKDPIRQITIDNSRNILYVLSEKGTVSAYDIGG 273 (1311)
T ss_pred CCCCcceeeEeccccceeeeeccCceEEEEEccC
Confidence 4567899999988888999999999999999976
No 486
>PRK13684 Ycf48-like protein; Provisional
Probab=32.57 E-value=2e+02 Score=21.10 Aligned_cols=83 Identities=14% Similarity=0.125 Sum_probs=44.4
Q ss_pred ccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc--cc----------c
Q psy7062 25 VEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC--FI----------Q 92 (148)
Q Consensus 25 ~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~--~~----------~ 92 (148)
+.++++ +..|.+.. ..+.+...-..........+.++.+.++++.++.+ ..|.+.+-....+ ++ .
T Consensus 184 g~~v~~-g~~G~i~~-s~~~gg~tW~~~~~~~~~~l~~i~~~~~g~~~~vg-~~G~~~~~s~d~G~sW~~~~~~~~~~~~ 260 (334)
T PRK13684 184 GKYVAV-SSRGNFYS-TWEPGQTAWTPHQRNSSRRLQSMGFQPDGNLWMLA-RGGQIRFNDPDDLESWSKPIIPEITNGY 260 (334)
T ss_pred CeEEEE-eCCceEEE-EcCCCCCeEEEeeCCCcccceeeeEcCCCCEEEEe-cCCEEEEccCCCCCccccccCCcccccc
Confidence 556666 55565443 21111001222222335678899999999877665 4565543223322 11 2
Q ss_pred cceEEEEccCCCEEEEEe
Q psy7062 93 QVNALRITPDKQLLASAE 110 (148)
Q Consensus 93 ~i~~~~~sp~~~~l~~~~ 110 (148)
.+..+.+.|+++.++++.
T Consensus 261 ~l~~v~~~~~~~~~~~G~ 278 (334)
T PRK13684 261 GYLDLAYRTPGEIWAGGG 278 (334)
T ss_pred ceeeEEEcCCCCEEEEcC
Confidence 366788888877665554
No 487
>PF08801 Nucleoporin_N: Nup133 N terminal like; InterPro: IPR014908 Nucleoporins are the main components of the nuclear pore complex (NPC) in eukaryotic cells, and mediate bidirectional nucleocytoplasmic transport, especially of mRNA and proteins. RNA undergoing nuclear export first encounters the basket of the nuclear pore and many nucleoporins are accessible on the basket side of the pore [, ]. This entry represents the N-terminal of Nucleoprotein which forms a seven-bladed beta propeller structure []. ; PDB: 1XKS_A.
Probab=31.96 E-value=87 Score=23.69 Aligned_cols=31 Identities=23% Similarity=0.503 Sum_probs=25.0
Q ss_pred CCEEEEEEccCCCEEEEEeCCCcEEEEECCc
Q psy7062 58 KNVVEVGFQEDGKWMFTGGEDCRARIWDLSL 88 (148)
Q Consensus 58 ~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~ 88 (148)
..|..++..+..+.+++.+.++.|++||+..
T Consensus 190 ~~I~~v~~d~~r~~ly~l~~~~~Iq~w~l~~ 220 (422)
T PF08801_consen 190 PKIVQVAVDPSRRLLYTLTSDGSIQVWDLGP 220 (422)
T ss_dssp --EEEEEEETTTTEEEEEESSE-EEEEEE-S
T ss_pred hceeeEEecCCcCEEEEEeCCCcEEEEEEeC
Confidence 3488999988889999999999999999964
No 488
>PF05787 DUF839: Bacterial protein of unknown function (DUF839); InterPro: IPR008557 This family consists of bacterial proteins of unknown function.
Probab=30.44 E-value=2.4e+02 Score=22.43 Aligned_cols=17 Identities=18% Similarity=0.309 Sum_probs=8.3
Q ss_pred ccceEEEEccCCCEEEE
Q psy7062 92 QQVNALRITPDKQLLAS 108 (148)
Q Consensus 92 ~~i~~~~~sp~~~~l~~ 108 (148)
..++.++|+||++.|+.
T Consensus 502 aE~tG~~fspDg~tlFv 518 (524)
T PF05787_consen 502 AEITGPCFSPDGRTLFV 518 (524)
T ss_pred cccccceECCCCCEEEE
Confidence 34444555555554443
No 489
>PF11635 Med16: Mediator complex subunit 16; InterPro: IPR021665 Mediator is a large complex of up to 33 proteins that is conserved from plants through fungi to humans - the number and representation of individual subunits varying with species [],[]. It is arranged into four different sections, a core, a head, a tail and a kinase-activity part, and the number of subunits within each of these is what varies with species. Overall, Mediator regulates the transcriptional activity of RNA polymerase II but it would appear that each of the four different sections has a slightly different function. Med16 is one of the subunits of the Tail portion of the Mediator complex and is required for lipopolysaccharide gene-expression []. Several members including the human protein, Q9Y2X0 from SWISSPROT, have one or more WD40 domains on them, PF00400 from PFAM.
Probab=30.13 E-value=3.3e+02 Score=22.79 Aligned_cols=56 Identities=18% Similarity=0.026 Sum_probs=44.0
Q ss_pred CCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----c------------------c----ccceEEEEccCCCEEEEEe
Q psy7062 58 KNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-----F------------------I----QQVNALRITPDKQLLASAE 110 (148)
Q Consensus 58 ~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-----~------------------~----~~i~~~~~sp~~~~l~~~~ 110 (148)
..|.++....-+..++..-.||+|.++|-.+. . . ..+..++|||.+..++.-.
T Consensus 260 ~~V~si~~~~~~~~v~~~~~DGsI~~~dr~t~~~~~~~~~~~~~~~~v~s~~~~Gf~fp~~~~~~~vafSPt~c~~v~~~ 339 (753)
T PF11635_consen 260 KRVVSITSPELDIVVAFAFSDGSIEFRDRNTMKELNETRTNGEPPNTVTSLFQAGFHFPCIQPPLHVAFSPTMCSLVQID 339 (753)
T ss_pred CeEEEEEecccCcEEEEEEcCCeEEEEecCcchhhcccccccCCccccccccccccccccCCCCceEEECcccceEEEEe
Confidence 56777877777888888999999999998654 1 1 3445688999999888888
Q ss_pred cCC
Q psy7062 111 ELS 113 (148)
Q Consensus 111 ~d~ 113 (148)
.++
T Consensus 340 ~~~ 342 (753)
T PF11635_consen 340 EDG 342 (753)
T ss_pred cCC
Confidence 877
No 490
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=29.41 E-value=3.3e+02 Score=22.53 Aligned_cols=99 Identities=12% Similarity=0.108 Sum_probs=52.2
Q ss_pred CccEEEEEecCC------eEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCC-C----cEEEEECCcc---
Q psy7062 24 LVEMVAALGGYQ------HIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGED-C----RARIWDLSLC--- 89 (148)
Q Consensus 24 ~~~~l~~~~~d~------~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~-~----~i~l~d~~~~--- 89 (148)
+.+++|- +.|. ++++.|+.++ +.+.. .-.....+++|.+|++.+.-...+ + ++.-..+.+.
T Consensus 139 D~~~la~-s~D~~G~e~y~lr~kdL~tg--~~~~d--~i~~~~~~~~Wa~d~~~lfYt~~d~~~rp~kv~~h~~gt~~~~ 213 (682)
T COG1770 139 DHNLLAY-SVDVLGDEQYTLRFKDLATG--EELPD--EITNTSGSFAWAADGKTLFYTRLDENHRPDKVWRHRLGTPGSS 213 (682)
T ss_pred CCceEEE-EEecccccEEEEEEEecccc--cccch--hhcccccceEEecCCCeEEEEEEcCCCCcceEEEEecCCCCCc
Confidence 3666666 3332 6888899887 43322 223446778999999977555443 2 2444444442
Q ss_pred ----cc--ccceEE--EEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062 90 ----FI--QQVNAL--RITPDKQLLASAEELSCCYCGAAVFVYNSCYPA 130 (148)
Q Consensus 90 ----~~--~~i~~~--~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~ 130 (148)
++ ...+-+ .=+.+.++|+....+- ....+++.+...+.
T Consensus 214 d~lvyeE~d~~f~~~v~~s~s~~yi~i~~~~~---~tsE~~ll~a~~p~ 259 (682)
T COG1770 214 DELVYEEKDDRFFLSVGRSRSEAYIVISLGSH---ITSEVRLLDADDPE 259 (682)
T ss_pred ceEEEEcCCCcEEEEeeeccCCceEEEEcCCC---cceeEEEEecCCCC
Confidence 22 222222 2233555555544322 23356777765544
No 491
>TIGR03548 mutarot_permut cyclically-permuted mutatrotase family protein. Members of this protein family show essentially full-length homology, cyclically permuted, to YjhT from Escherichia coli. YjhT was shown to act as a mutarotase for sialic acid, and by this ability to be able to act as a virulence factor. Members of the YjhT family (TIGR03547) and this cyclically-permuted family have multiple repeats of the beta-propeller-forming Kelch repeat.
Probab=28.72 E-value=2.3e+02 Score=20.46 Aligned_cols=104 Identities=9% Similarity=0.088 Sum_probs=50.7
Q ss_pred ccEEEEEecC-----CeEEEEeCCCCCCCc-eEEecCCC-CCEEEEEEccCCCEEEEEeC-----CCcEEEEECCcc---
Q psy7062 25 VEMVAALGGY-----QHIRMYDFGSNNPNP-VINCEGVS-KNVVEVGFQEDGKWMFTGGE-----DCRARIWDLSLC--- 89 (148)
Q Consensus 25 ~~~l~~~~~d-----~~v~~~d~~~~~~~~-~~~~~~~~-~~i~~~~~sp~~~~l~~~~~-----~~~i~l~d~~~~--- 89 (148)
+.+++.|+.+ ..+..||+.+..... ...+..-. ......+..-+++..+.|+. ...+..||+.+.
T Consensus 73 ~~lyviGG~~~~~~~~~v~~~d~~~~~w~~~~~~~~~lp~~~~~~~~~~~~~~iYv~GG~~~~~~~~~v~~yd~~~~~W~ 152 (323)
T TIGR03548 73 NGIYYIGGSNSSERFSSVYRITLDESKEELICETIGNLPFTFENGSACYKDGTLYVGGGNRNGKPSNKSYLFNLETQEWF 152 (323)
T ss_pred CEEEEEcCCCCCCCceeEEEEEEcCCceeeeeeEcCCCCcCccCceEEEECCEEEEEeCcCCCccCceEEEEcCCCCCee
Confidence 4566665643 257777877652100 11111111 11111112235666666664 245888888766
Q ss_pred -cc-----ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062 90 -FI-----QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA 130 (148)
Q Consensus 90 -~~-----~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~ 130 (148)
+. .+.......-+++..+.|+.++.. ...+..||+.+.+
T Consensus 153 ~~~~~p~~~r~~~~~~~~~~~iYv~GG~~~~~--~~~~~~yd~~~~~ 197 (323)
T TIGR03548 153 ELPDFPGEPRVQPVCVKLQNELYVFGGGSNIA--YTDGYKYSPKKNQ 197 (323)
T ss_pred ECCCCCCCCCCcceEEEECCEEEEEcCCCCcc--ccceEEEecCCCe
Confidence 21 122222333467777777765421 1245678877544
No 492
>KOG0379|consensus
Probab=28.12 E-value=2.9e+02 Score=21.57 Aligned_cols=63 Identities=14% Similarity=0.060 Sum_probs=39.6
Q ss_pred CCEEEEEeCCC------cEEEEECCcc----cc-------ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcc
Q psy7062 69 GKWMFTGGEDC------RARIWDLSLC----FI-------QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAA 131 (148)
Q Consensus 69 ~~~l~~~~~~~------~i~l~d~~~~----~~-------~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~ 131 (148)
.++++-|+.+. .++.+|+.+. +. .+..+.+..-+.+.++.|+.+......+.++++|+.+.+-
T Consensus 123 ~~l~lfGG~~~~~~~~~~l~~~d~~t~~W~~l~~~~~~P~~r~~Hs~~~~g~~l~vfGG~~~~~~~~ndl~i~d~~~~~W 202 (482)
T KOG0379|consen 123 DKLYLFGGTDKKYRNLNELHSLDLSTRTWSLLSPTGDPPPPRAGHSATVVGTKLVVFGGIGGTGDSLNDLHIYDLETSTW 202 (482)
T ss_pred CeEEEEccccCCCCChhheEeccCCCCcEEEecCcCCCCCCcccceEEEECCEEEEECCccCcccceeeeeeeccccccc
Confidence 55566677764 7888898887 11 3333444444556666666555443456799999887663
No 493
>PF03022 MRJP: Major royal jelly protein; InterPro: IPR003534 The major royal jelly proteins (MRJPs) comprise 12.5% of the mass, and 82-90% of the protein content [], of honeybee (Apis mellifera) royal jelly. Royal jelly is a substance secreted by the cephalic glands of nurse bees [] and it is used to trigger development of a queen bee from a bee larva. The biological function of the MRJPs is unknown, but they are believed to play a major role in nutrition due to their high essential amino acid content []. Two royal jelly proteins, MRJP3 and MRJP5, contain a tandem repeat that results from a high genetic variablility. This polymorphism may be useful for genotyping individual bees [].; PDB: 3Q6P_B 3Q6K_A 3Q6T_A 2QE8_B.
Probab=27.53 E-value=2.4e+02 Score=20.31 Aligned_cols=61 Identities=8% Similarity=-0.058 Sum_probs=37.2
Q ss_pred cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCC-CceEEe-cCC--CCCEEEEEEcc--CCCEEEEEe
Q psy7062 14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNP-NPVINC-EGV--SKNVVEVGFQE--DGKWMFTGG 76 (148)
Q Consensus 14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~-~~~~~~-~~~--~~~i~~~~~sp--~~~~l~~~~ 76 (148)
-...++|+. |.++.+--..+.|..|+....-. +....+ +.. -..+.++++.+ +|.+.+..+
T Consensus 188 s~g~~~D~~--G~ly~~~~~~~aI~~w~~~~~~~~~~~~~l~~d~~~l~~pd~~~i~~~~~g~L~v~sn 254 (287)
T PF03022_consen 188 SDGMAIDPN--GNLYFTDVEQNAIGCWDPDGPYTPENFEILAQDPRTLQWPDGLKIDPEGDGYLWVLSN 254 (287)
T ss_dssp ECEEEEETT--TEEEEEECCCTEEEEEETTTSB-GCCEEEEEE-CC-GSSEEEEEE-T--TS-EEEEE-
T ss_pred CceEEECCC--CcEEEecCCCCeEEEEeCCCCcCccchheeEEcCceeeccceeeeccccCceEEEEEC
Confidence 356777775 88888877888999999987210 112222 212 35788888888 777555443
No 494
>TIGR03547 muta_rot_YjhT mutatrotase, YjhT family. Members of this protein family contain multiple copies of the beta-propeller-forming Kelch repeat. All are full-length homologs to YjhT of Escherichia coli, which has been identified as a mutarotase for sialic acid. This protein improves bacterial ability to obtain host sialic acid, and thus serves as a virulence factor. Some bacteria carry what appears to be a cyclically permuted homolog of this protein.
Probab=27.03 E-value=2.5e+02 Score=20.42 Aligned_cols=34 Identities=15% Similarity=0.040 Sum_probs=18.7
Q ss_pred CcEEEEECCcc-------cc-cc-ceEEEEccCCCEEEEEecC
Q psy7062 79 CRARIWDLSLC-------FI-QQ-VNALRITPDKQLLASAEEL 112 (148)
Q Consensus 79 ~~i~l~d~~~~-------~~-~~-i~~~~~sp~~~~l~~~~~d 112 (148)
..+..||..+. +. .+ .......-+++..+.|+.+
T Consensus 168 ~~v~~YDp~t~~W~~~~~~p~~~r~~~~~~~~~~~iyv~GG~~ 210 (346)
T TIGR03547 168 KNVLSYDPSTNQWRNLGENPFLGTAGSAIVHKGNKLLLINGEI 210 (346)
T ss_pred ceEEEEECCCCceeECccCCCCcCCCceEEEECCEEEEEeeee
Confidence 45888998776 11 11 1222233477777777653
No 495
>COG1520 FOG: WD40-like repeat [Function unknown]
Probab=26.41 E-value=2.7e+02 Score=20.57 Aligned_cols=61 Identities=13% Similarity=0.036 Sum_probs=35.8
Q ss_pred ccEEEEEecCCeEEEEeCCCCCCCceEEecCCC--CCEEEEEEccCCCEEEEEeCCCcEEEEECCcc
Q psy7062 25 VEMVAALGGYQHIRMYDFGSNNPNPVINCEGVS--KNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC 89 (148)
Q Consensus 25 ~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~--~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~ 89 (148)
+..++. ..++.+.-+|.+++ ..+....... ..+.+-..-.+|+ ++.++.++.+..+|.+++
T Consensus 69 g~v~~~-~~~G~i~A~d~~~g--~~~W~~~~~~~~~~~~~~~~~~~G~-i~~g~~~g~~y~ld~~~G 131 (370)
T COG1520 69 GTVYVG-TRDGNIFALNPDTG--LVKWSYPLLGAVAQLSGPILGSDGK-IYVGSWDGKLYALDASTG 131 (370)
T ss_pred CeEEEe-cCCCcEEEEeCCCC--cEEecccCcCcceeccCceEEeCCe-EEEecccceEEEEECCCC
Confidence 444443 77888888888887 5443322111 1111112222566 777888888888888776
No 496
>KOG1520|consensus
Probab=26.26 E-value=66 Score=24.27 Aligned_cols=73 Identities=12% Similarity=0.119 Sum_probs=40.3
Q ss_pred cCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCC-CcE-EEEECCcc------cc----ccceEEEEc
Q psy7062 33 GYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGED-CRA-RIWDLSLC------FI----QQVNALRIT 100 (148)
Q Consensus 33 ~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~-~~i-~l~d~~~~------~~----~~i~~~~~s 100 (148)
.+|.+.-||..++ ....+...-....++++|||+.+++.+-.. ..+ +.|=-... |. +..=++..+
T Consensus 197 ~~GRl~~YD~~tK---~~~VLld~L~F~NGlaLS~d~sfvl~~Et~~~ri~rywi~g~k~gt~EvFa~~LPG~PDNIR~~ 273 (376)
T KOG1520|consen 197 PTGRLFRYDPSTK---VTKVLLDGLYFPNGLALSPDGSFVLVAETTTARIKRYWIKGPKAGTSEVFAEGLPGYPDNIRRD 273 (376)
T ss_pred CccceEEecCccc---chhhhhhcccccccccCCCCCCEEEEEeeccceeeeeEecCCccCchhhHhhcCCCCCcceeEC
Confidence 3456667777665 222332233456789999999988776432 233 34422221 22 444556667
Q ss_pred cCCCEEEE
Q psy7062 101 PDKQLLAS 108 (148)
Q Consensus 101 p~~~~l~~ 108 (148)
++|.+.+.
T Consensus 274 ~~G~fWVa 281 (376)
T KOG1520|consen 274 STGHFWVA 281 (376)
T ss_pred CCCCEEEE
Confidence 77764333
No 497
>KOG3179|consensus
Probab=26.17 E-value=85 Score=21.69 Aligned_cols=41 Identities=12% Similarity=0.240 Sum_probs=31.7
Q ss_pred CcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCC
Q psy7062 13 GQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSK 58 (148)
Q Consensus 13 ~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~ 58 (148)
.|...+++.+..-+++++ +++-.+.+|.... .+-++++|+.
T Consensus 153 cHqDevle~PE~a~llas-Se~ceve~fs~~~----~~l~fQGHPE 193 (245)
T KOG3179|consen 153 CHQDEVLELPEGAELLAS-SEKCEVEMFSIED----HLLCFQGHPE 193 (245)
T ss_pred hcccceecCCchhhhhcc-ccccceEEEEecc----eEEEecCCch
Confidence 356777787777788888 8888999998864 4778888863
No 498
>PF06739 SBBP: Beta-propeller repeat; InterPro: IPR010620 This family is related to IPR001680 from INTERPRO and is likely to also form a beta-propeller. SBBP stands for Seven Bladed Beta Propeller.
Probab=25.71 E-value=89 Score=14.77 Aligned_cols=22 Identities=14% Similarity=0.161 Sum_probs=17.4
Q ss_pred CCEEEEEEccCCCEEEEEeCCC
Q psy7062 58 KNVVEVGFQEDGKWMFTGGEDC 79 (148)
Q Consensus 58 ~~i~~~~~sp~~~~l~~~~~~~ 79 (148)
....+|++.++|+..++|..++
T Consensus 13 ~~~~~IavD~~GNiYv~G~T~~ 34 (38)
T PF06739_consen 13 DYGNGIAVDSNGNIYVTGYTNG 34 (38)
T ss_pred eeEEEEEECCCCCEEEEEeecC
Confidence 3478889999999888887654
No 499
>PF01344 Kelch_1: Kelch motif; InterPro: IPR006652 Kelch is a 50-residue motif, named after the Drosophila mutant in which it was first identified []. This sequence motif represents one beta-sheet blade, and several of these repeats can associate to form a beta-propeller. For instance, the motif appears 6 times in Drosophila egg-chamber regulatory protein, creating a 6-bladed beta-propeller. The motif is also found in mouse protein MIPP [] and in a number of poxviruses. In addition, kelch repeats have been recognised in alpha- and beta-scruin [, ], and in galactose oxidase from the fungus Dactylium dendroides [, ]. The structure of galactose oxidase reveals that the repeated sequence corresponds to a 4-stranded anti-parallel beta-sheet motif that forms the repeat unit in a super-barrel structural fold []. The known functions of kelch-containing proteins are diverse: scruin is an actin cross-linking protein; galactose oxidase catalyses the oxidation of the hydroxyl group at the C6 position in D-galactose; neuraminidase hydrolyses sialic acid residues from glycoproteins; and kelch may have a cytoskeletal function, as it is localised to the actin-rich ring canals that connect the 15 nurse cells to the developing oocyte in Drosophila []. Nevertheless, based on the location of the kelch pattern in the catalytic unit in galactose oxidase, functionally important residues have been predicted in glyoxal oxidase []. This entry represents a type of kelch sequence motif that comprises one beta-sheet blade.; GO: 0005515 protein binding; PDB: 2XN4_A 2WOZ_A 3II7_A 4ASC_A 1U6D_X 1ZGK_A 2FLU_X 2VPJ_A 2DYH_A 1X2R_A ....
Probab=24.68 E-value=95 Score=14.77 Aligned_cols=30 Identities=10% Similarity=-0.058 Sum_probs=18.8
Q ss_pred cCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062 101 PDKQLLASAEELSCCYCGAAVFVYNSCYPA 130 (148)
Q Consensus 101 p~~~~l~~~~~d~~~~~~~~i~~~d~~~~~ 130 (148)
-++...+.|+.++.......+..||..+.+
T Consensus 10 ~~~~iyv~GG~~~~~~~~~~v~~yd~~~~~ 39 (47)
T PF01344_consen 10 VGNKIYVIGGYDGNNQPTNSVEVYDPETNT 39 (47)
T ss_dssp ETTEEEEEEEBESTSSBEEEEEEEETTTTE
T ss_pred ECCEEEEEeeecccCceeeeEEEEeCCCCE
Confidence 366666777665533444567888877554
No 500
>PF14779 BBS1: Ciliary BBSome complex subunit 1
Probab=24.48 E-value=2.7e+02 Score=19.92 Aligned_cols=56 Identities=11% Similarity=-0.033 Sum_probs=33.9
Q ss_pred ccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEcc--C-CC-EEEEEeCCCcEEE
Q psy7062 25 VEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQE--D-GK-WMFTGGEDCRARI 83 (148)
Q Consensus 25 ~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp--~-~~-~l~~~~~~~~i~l 83 (148)
-..|+.|.+++.+.+.|.+.. ..+..+.-. +....+..+- | .. -++.+++||.|.+
T Consensus 195 ~scLViGTE~~~i~iLd~~af--~il~~~~lp-svPv~i~~~G~~devdyRI~Va~Rdg~iy~ 254 (257)
T PF14779_consen 195 VSCLVIGTESGEIYILDPQAF--TILKQVQLP-SVPVFISVSGQYDEVDYRIVVACRDGKIYT 254 (257)
T ss_pred cceEEEEecCCeEEEECchhh--eeEEEEecC-CCceEEEEEeeeeccceEEEEEeCCCEEEE
Confidence 456788899999999999876 555555432 2222333221 2 22 3556667777664
Done!