BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy7068
(487 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2KGR|A Chain A, Solution Structure Of Protein Itsn1 From Homo Sapiens.
Northeast Structural Genomics Consortium Target Hr5524a
Length = 111
Score = 128 bits (322), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 58/102 (56%), Positives = 77/102 (75%)
Query: 270 PPLEWAVPHASKLKYTQLFNTTDRTRSGFLSGPQARNIMVATGLSQGILAQIWNLADMDS 329
P EWAVP +S+LKY QLFN+ D+T SG L+GPQAR I++ + L Q LA IWNL+D+D
Sbjct: 2 PVAEWAVPQSSRLKYRQLFNSHDKTMSGHLTGPQARTILMQSSLPQAQLASIWNLSDIDQ 61
Query: 330 DGQLSCDEFVLAMHLCDLAKGGEKIPVPLPIDMIPPAFRRQR 371
DG+L+ +EF+LAMHL D+A G+ +P LP + IPP+FRR R
Sbjct: 62 DGKLTAEEFILAMHLIDVAMSGQPLPPVLPPEYIPPSFRRVR 103
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Query: 386 WNVSRHERTRFETHFQAM-KPVNGIVTGDQVKGFLMQSGLPVATLGQIWSLADTDQDGKM 444
W V + R ++ F + K ++G +TG Q + LMQS LP A L IW+L+D DQDGK+
Sbjct: 6 WAVPQSSRLKYRQLFNSHDKTMSGHLTGPQARTILMQSSLPQAQLASIWNLSDIDQDGKL 65
Query: 445 NINEFVIACKLISNKLRGFDIPPTLP 470
EF++A LI + G +PP LP
Sbjct: 66 TAEEFILAMHLIDVAMSGQPLPPVLP 91
>pdb|2KHN|A Chain A, Nmr Solution Structure Of The Eh 1 Domain From Human
Intersectin-1 Protein. Northeast Structural Genomics
Consortium Target Hr3646e
Length = 121
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 62/94 (65%)
Query: 382 AMDPWNVSRHERTRFETHFQAMKPVNGIVTGDQVKGFLMQSGLPVATLGQIWSLADTDQD 441
++D W ++ ER + + F ++KP++G +TGDQ + F QSGLP L QIW+LAD + D
Sbjct: 21 SLDTWAITVEERAKHDQQFHSLKPISGFITGDQARNFFFQSGLPQPVLAQIWALADMNND 80
Query: 442 GKMNINEFVIACKLISNKLRGFDIPPTLPVSLMQ 475
G+M+ EF IA KLI KL+G+ +P LP + Q
Sbjct: 81 GRMDQVEFSIAMKLIKLKLQGYQLPSALPPVMKQ 114
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 56/93 (60%), Gaps = 1/93 (1%)
Query: 267 LGGPPLEWAVPHASKLKYTQLFNTTDRTRSGFLSGPQARNIMVATGLSQGILAQIWNLAD 326
GG WA+ + K+ Q F++ + SGF++G QARN +GL Q +LAQIW LAD
Sbjct: 18 FGGSLDTWAITVEERAKHDQQFHSL-KPISGFITGDQARNFFFQSGLPQPVLAQIWALAD 76
Query: 327 MDSDGQLSCDEFVLAMHLCDLAKGGEKIPVPLP 359
M++DG++ EF +AM L L G ++P LP
Sbjct: 77 MNNDGRMDQVEFSIAMKLIKLKLQGYQLPSALP 109
>pdb|3FIA|A Chain A, Crystal Structure Of The Eh 1 Domain From Human
Intersectin- 1 Protein. Northeast Structural Genomics
Consortium Target Hr3646e
Length = 121
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 59/89 (66%)
Query: 382 AMDPWNVSRHERTRFETHFQAMKPVNGIVTGDQVKGFLMQSGLPVATLGQIWSLADTDQD 441
++D W ++ ER + + F ++KP++G +TGDQ + F QSGLP L QIW+LAD + D
Sbjct: 21 SLDTWAITVEERAKHDQQFHSLKPISGFITGDQARNFFFQSGLPQPVLAQIWALADXNND 80
Query: 442 GKMNINEFVIACKLISNKLRGFDIPPTLP 470
G+ + EF IA KLI KL+G+ +P LP
Sbjct: 81 GRXDQVEFSIAXKLIKLKLQGYQLPSALP 109
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 53/93 (56%), Gaps = 1/93 (1%)
Query: 267 LGGPPLEWAVPHASKLKYTQLFNTTDRTRSGFLSGPQARNIMVATGLSQGILAQIWNLAD 326
GG WA+ + K+ Q F++ + SGF++G QARN +GL Q +LAQIW LAD
Sbjct: 18 FGGSLDTWAITVEERAKHDQQFHSL-KPISGFITGDQARNFFFQSGLPQPVLAQIWALAD 76
Query: 327 MDSDGQLSCDEFVLAMHLCDLAKGGEKIPVPLP 359
++DG+ EF +A L L G ++P LP
Sbjct: 77 XNNDGRXDQVEFSIAXKLIKLKLQGYQLPSALP 109
>pdb|1EH2|A Chain A, Structure Of The Second Eps15 Homology Domain Of Human
Eps15, Nmr, 20 Structures
Length = 106
Score = 75.9 bits (185), Expect = 4e-14, Method: Composition-based stats.
Identities = 34/90 (37%), Positives = 57/90 (63%)
Query: 385 PWNVSRHERTRFETHFQAMKPVNGIVTGDQVKGFLMQSGLPVATLGQIWSLADTDQDGKM 444
PW V ++ +++ F ++ PVNG ++GD+VK L+ S LPV LG++W L+D D DG +
Sbjct: 6 PWAVKPEDKAKYDAIFDSLSPVNGFLSGDKVKPVLLNSKLPVDILGRVWELSDIDHDGML 65
Query: 445 NINEFVIACKLISNKLRGFDIPPTLPVSLM 474
+ +EF +A L+ L +P +LP +L+
Sbjct: 66 DRDEFAVAMFLVYCALEKEPVPMSLPPALV 95
Score = 70.1 bits (170), Expect = 3e-12, Method: Composition-based stats.
Identities = 39/105 (37%), Positives = 60/105 (57%), Gaps = 4/105 (3%)
Query: 265 NVLGGPPLEWAVPHASKLKYTQLFNTTDRTRSGFLSGPQARNIMVATGLSQGILAQIWNL 324
N G P WAV K KY +F++ +GFLSG + + +++ + L IL ++W L
Sbjct: 1 NRWGSP---WAVKPEDKAKYDAIFDSLSPV-NGFLSGDKVKPVLLNSKLPVDILGRVWEL 56
Query: 325 ADMDSDGQLSCDEFVLAMHLCDLAKGGEKIPVPLPIDMIPPAFRR 369
+D+D DG L DEF +AM L A E +P+ LP ++PP+ R+
Sbjct: 57 SDIDHDGMLDRDEFAVAMFLVYCALEKEPVPMSLPPALVPPSKRK 101
>pdb|1F8H|A Chain A, Structure Of The Second Eps15 Homology Domain Of Human
Eps15 In Complex With Ptgssstnpfr
Length = 95
Score = 75.9 bits (185), Expect = 5e-14, Method: Composition-based stats.
Identities = 34/90 (37%), Positives = 57/90 (63%)
Query: 385 PWNVSRHERTRFETHFQAMKPVNGIVTGDQVKGFLMQSGLPVATLGQIWSLADTDQDGKM 444
PW V ++ +++ F ++ PVNG ++GD+VK L+ S LPV LG++W L+D D DG +
Sbjct: 1 PWAVKPEDKAKYDAIFDSLSPVNGFLSGDKVKPVLLNSKLPVDILGRVWELSDIDHDGML 60
Query: 445 NINEFVIACKLISNKLRGFDIPPTLPVSLM 474
+ +EF +A L+ L +P +LP +L+
Sbjct: 61 DRDEFAVAMFLVYCALEKEPVPMSLPPALV 90
Score = 68.9 bits (167), Expect = 6e-12, Method: Composition-based stats.
Identities = 36/95 (37%), Positives = 56/95 (58%), Gaps = 1/95 (1%)
Query: 274 WAVPHASKLKYTQLFNTTDRTRSGFLSGPQARNIMVATGLSQGILAQIWNLADMDSDGQL 333
WAV K KY +F++ +GFLSG + + +++ + L IL ++W L+D+D DG L
Sbjct: 2 WAVKPEDKAKYDAIFDSLSPV-NGFLSGDKVKPVLLNSKLPVDILGRVWELSDIDHDGML 60
Query: 334 SCDEFVLAMHLCDLAKGGEKIPVPLPIDMIPPAFR 368
DEF +AM L A E +P+ LP ++PP+ R
Sbjct: 61 DRDEFAVAMFLVYCALEKEPVPMSLPPALVPPSKR 95
>pdb|1FF1|A Chain A, Structure Of The Second Eps15 Homology Domain Of Human
Eps15 In Complex With Ptgssstnpfl
Length = 95
Score = 75.5 bits (184), Expect = 6e-14, Method: Composition-based stats.
Identities = 34/90 (37%), Positives = 57/90 (63%)
Query: 385 PWNVSRHERTRFETHFQAMKPVNGIVTGDQVKGFLMQSGLPVATLGQIWSLADTDQDGKM 444
PW V ++ +++ F ++ PVNG ++GD+VK L+ S LPV LG++W L+D D DG +
Sbjct: 1 PWAVKPEDKAKYDAIFDSLSPVNGFLSGDKVKPVLLNSKLPVDILGRVWELSDIDHDGML 60
Query: 445 NINEFVIACKLISNKLRGFDIPPTLPVSLM 474
+ +EF +A L+ L +P +LP +L+
Sbjct: 61 DRDEFAVAMFLVYCALEKEPVPMSLPPALV 90
Score = 67.8 bits (164), Expect = 1e-11, Method: Composition-based stats.
Identities = 35/93 (37%), Positives = 55/93 (59%), Gaps = 1/93 (1%)
Query: 274 WAVPHASKLKYTQLFNTTDRTRSGFLSGPQARNIMVATGLSQGILAQIWNLADMDSDGQL 333
WAV K KY +F++ +GFLSG + + +++ + L IL ++W L+D+D DG L
Sbjct: 2 WAVKPEDKAKYDAIFDSLSPV-NGFLSGDKVKPVLLNSKLPVDILGRVWELSDIDHDGML 60
Query: 334 SCDEFVLAMHLCDLAKGGEKIPVPLPIDMIPPA 366
DEF +AM L A E +P+ LP ++PP+
Sbjct: 61 DRDEFAVAMFLVYCALEKEPVPMSLPPALVPPS 93
>pdb|2JXC|A Chain A, Structure Of The Eps15-Eh2 Stonin2 Complex
Length = 100
Score = 75.1 bits (183), Expect = 8e-14, Method: Composition-based stats.
Identities = 34/90 (37%), Positives = 57/90 (63%)
Query: 385 PWNVSRHERTRFETHFQAMKPVNGIVTGDQVKGFLMQSGLPVATLGQIWSLADTDQDGKM 444
PW V ++ +++ F ++ PVNG ++GD+VK L+ S LPV LG++W L+D D DG +
Sbjct: 6 PWAVKPEDKAKYDAIFDSLSPVNGFLSGDKVKPVLLNSKLPVDILGRVWELSDIDHDGML 65
Query: 445 NINEFVIACKLISNKLRGFDIPPTLPVSLM 474
+ +EF +A L+ L +P +LP +L+
Sbjct: 66 DRDEFAVAMFLVYCALEKEPVPMSLPPALV 95
Score = 68.9 bits (167), Expect = 5e-12, Method: Composition-based stats.
Identities = 39/102 (38%), Positives = 59/102 (57%), Gaps = 4/102 (3%)
Query: 267 LGGPPLEWAVPHASKLKYTQLFNTTDRTRSGFLSGPQARNIMVATGLSQGILAQIWNLAD 326
LG P WAV K KY +F++ +GFLSG + + +++ + L IL ++W L+D
Sbjct: 3 LGSP---WAVKPEDKAKYDAIFDSLSPV-NGFLSGDKVKPVLLNSKLPVDILGRVWELSD 58
Query: 327 MDSDGQLSCDEFVLAMHLCDLAKGGEKIPVPLPIDMIPPAFR 368
+D DG L DEF +AM L A E +P+ LP ++PP+ R
Sbjct: 59 IDHDGMLDRDEFAVAMFLVYCALEKEPVPMSLPPALVPPSKR 100
>pdb|1FI6|A Chain A, Solution Structure Of The Reps1 Eh Domain
Length = 92
Score = 73.9 bits (180), Expect = 2e-13, Method: Composition-based stats.
Identities = 32/90 (35%), Positives = 52/90 (57%), Gaps = 1/90 (1%)
Query: 386 WNVSRHERTRFETHFQAMKP-VNGIVTGDQVKGFLMQSGLPVATLGQIWSLADTDQDGKM 444
W ++ +R + F+ ++P +NG + G K F +S LP+ L IW L+D D+DG +
Sbjct: 1 WKITDEQRQYYVNQFKTIQPDLNGFIPGSAAKEFFTKSKLPILELSHIWELSDFDKDGAL 60
Query: 445 NINEFVIACKLISNKLRGFDIPPTLPVSLM 474
++EF A L+ + G+D+P LP SLM
Sbjct: 61 TLDEFCAAFHLVVARKNGYDLPEKLPESLM 90
Score = 59.7 bits (143), Expect = 3e-09, Method: Composition-based stats.
Identities = 30/91 (32%), Positives = 42/91 (46%)
Query: 274 WAVPHASKLKYTQLFNTTDRTRSGFLSGPQARNIMVATGLSQGILAQIWNLADMDSDGQL 333
W + + Y F T +GF+ G A+ + L L+ IW L+D D DG L
Sbjct: 1 WKITDEQRQYYVNQFKTIQPDLNGFIPGSAAKEFFTKSKLPILELSHIWELSDFDKDGAL 60
Query: 334 SCDEFVLAMHLCDLAKGGEKIPVPLPIDMIP 364
+ DEF A HL K G +P LP ++P
Sbjct: 61 TLDEFCAAFHLVVARKNGYDLPEKLPESLMP 91
>pdb|2QPT|A Chain A, Crystal Structure Of An Ehd Atpase Involved In Membrane
Remodelling
Length = 550
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 55/99 (55%), Gaps = 2/99 (2%)
Query: 273 EWAVPHASKLKYTQLFNTTDRTRSGFLSGPQARNIMVATGLSQGILAQIWNLADMDSDGQ 332
EW V K KY ++F G LSG +A+ MV T L +L +IW L+D+D DG
Sbjct: 450 EWVVT-KDKSKYDEIFYNLAPA-DGKLSGSKAKTWMVGTKLPNSVLGRIWKLSDVDRDGM 507
Query: 333 LSCDEFVLAMHLCDLAKGGEKIPVPLPIDMIPPAFRRQR 371
L +EF LA HL + G +P LP ++PP+ RRQ+
Sbjct: 508 LDDEEFALASHLIEAKLEGHGLPTNLPRRLVPPSKRRQK 546
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Query: 386 WNVSRHERTRFETHFQAMKPVNGIVTGDQVKGFLMQSGLPVATLGQIWSLADTDQDGKMN 445
W V++ ++++++ F + P +G ++G + K +++ + LP + LG+IW L+D D+DG ++
Sbjct: 451 WVVTK-DKSKYDEIFYNLAPADGKLSGSKAKTWMVGTKLPNSVLGRIWKLSDVDRDGMLD 509
Query: 446 INEFVIACKLISNKLRGFDIPPTLPVSLM 474
EF +A LI KL G +P LP L+
Sbjct: 510 DEEFALASHLIEAKLEGHGLPTNLPRRLV 538
>pdb|1C07|A Chain A, Structure Of The Third Eps15 Homology Domain Of Human
Eps15
Length = 95
Score = 72.8 bits (177), Expect = 4e-13, Method: Composition-based stats.
Identities = 42/95 (44%), Positives = 55/95 (57%), Gaps = 3/95 (3%)
Query: 274 WAVPHASKLKYTQLFNTTDRTRSGFLSGPQARNIMVATGLSQGILAQIWNLADMDSDGQL 333
W V A K KY ++F TD+ GF+SG + R I + TGL +LA IW+L D G+L
Sbjct: 2 WVVSPAEKAKYDEIFLKTDKDMDGFVSGLEVREIFLKTGLPSTLLAHIWSLCDTKDCGKL 61
Query: 334 SCDEFVLAMHLCD--LAKGGEKIPVPLPIDMIPPA 366
S D+F LA HL L KG + V P +MIPP+
Sbjct: 62 SKDQFALAFHLISQKLIKGIDPPHVLTP-EMIPPS 95
Score = 59.3 bits (142), Expect = 4e-09, Method: Composition-based stats.
Identities = 33/86 (38%), Positives = 52/86 (60%), Gaps = 2/86 (2%)
Query: 386 WNVSRHERTRFETHF-QAMKPVNGIVTGDQVKGFLMQSGLPVATLGQIWSLADTDQDGKM 444
W VS E+ +++ F + K ++G V+G +V+ +++GLP L IWSL DT GK+
Sbjct: 2 WVVSPAEKAKYDEIFLKTDKDMDGFVSGLEVREIFLKTGLPSTLLAHIWSLCDTKDCGKL 61
Query: 445 NINEFVIACKLISNKL-RGFDIPPTL 469
+ ++F +A LIS KL +G D P L
Sbjct: 62 SKDQFALAFHLISQKLIKGIDPPHVL 87
>pdb|2KFF|A Chain A, Structure Of The C-Terminal Domain Of Ehd1 With
Fnyestnpftak
pdb|2KFG|A Chain A, Structure Of The C-Terminal Domain Of Ehd1 In Complex With
Fnyestdpftak
pdb|2KFH|A Chain A, Structure Of The C-Terminal Domain Of Ehd1 With
Fnyestgpftak
pdb|2KSP|A Chain A, Mechanism For The Selective Interaction Of C-Terminal
Eh-Dom Proteins With Specific Npf-Containing Partners
Length = 105
Score = 68.2 bits (165), Expect = 1e-11, Method: Composition-based stats.
Identities = 39/104 (37%), Positives = 57/104 (54%), Gaps = 2/104 (1%)
Query: 267 LGGPPLEWAVPHASKLKYTQLFNTTDRTRSGFLSGPQARNIMVATGLSQGILAQIWNLAD 326
LG +EW V K Y ++F T +G ++G A+ MV + L +L +IW LAD
Sbjct: 3 LGSDDVEWVV-GKDKPTYDEIFYTLSPV-NGKITGANAKKEMVKSKLPNTVLGKIWKLAD 60
Query: 327 MDSDGQLSCDEFVLAMHLCDLAKGGEKIPVPLPIDMIPPAFRRQ 370
+D DG L +EF LA HL + G ++P LP ++PP+ RR
Sbjct: 61 VDKDGLLDDEEFALANHLIKVKLEGHELPADLPPHLVPPSKRRH 104
Score = 67.8 bits (164), Expect = 1e-11, Method: Composition-based stats.
Identities = 36/89 (40%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 386 WNVSRHERTRFETHFQAMKPVNGIVTGDQVKGFLMQSGLPVATLGQIWSLADTDQDGKMN 445
W V + + T ++ F + PVNG +TG K +++S LP LG+IW LAD D+DG ++
Sbjct: 10 WVVGKDKPT-YDEIFYTLSPVNGKITGANAKKEMVKSKLPNTVLGKIWKLADVDKDGLLD 68
Query: 446 INEFVIACKLISNKLRGFDIPPTLPVSLM 474
EF +A LI KL G ++P LP L+
Sbjct: 69 DEEFALANHLIKVKLEGHELPADLPPHLV 97
>pdb|2JQ6|A Chain A, Structure Of Eh-Domain Of Ehd1
Length = 139
Score = 67.8 bits (164), Expect = 1e-11, Method: Composition-based stats.
Identities = 36/89 (40%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 386 WNVSRHERTRFETHFQAMKPVNGIVTGDQVKGFLMQSGLPVATLGQIWSLADTDQDGKMN 445
W V + + T ++ F + PVNG +TG K +++S LP LG+IW LAD D+DG ++
Sbjct: 44 WVVGKDKPT-YDEIFYTLSPVNGKITGANAKKEMVKSKLPNTVLGKIWKLADVDKDGLLD 102
Query: 446 INEFVIACKLISNKLRGFDIPPTLPVSLM 474
EF +A LI KL G ++P LP L+
Sbjct: 103 DEEFALANHLIKVKLEGHELPADLPPHLV 131
Score = 65.5 bits (158), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/99 (37%), Positives = 55/99 (55%), Gaps = 2/99 (2%)
Query: 272 LEWAVPHASKLKYTQLFNTTDRTRSGFLSGPQARNIMVATGLSQGILAQIWNLADMDSDG 331
+EW V K Y ++F T +G ++G A+ MV + L +L +IW LAD+D DG
Sbjct: 42 VEWVV-GKDKPTYDEIFYTLSPV-NGKITGANAKKEMVKSKLPNTVLGKIWKLADVDKDG 99
Query: 332 QLSCDEFVLAMHLCDLAKGGEKIPVPLPIDMIPPAFRRQ 370
L +EF LA HL + G ++P LP ++PP+ RR
Sbjct: 100 LLDDEEFALANHLIKVKLEGHELPADLPPHLVPPSKRRH 138
>pdb|1IQ3|A Chain A, Solution Structure Of The Eps15 Homology Domain Of A Human
Pob1
Length = 110
Score = 58.9 bits (141), Expect = 5e-09, Method: Composition-based stats.
Identities = 28/91 (30%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Query: 384 DPWNVSRHERTRFETHFQAMKP-VNGIVTGDQVKGFLMQSGLPVATLGQIWSLADTDQDG 442
+PW ++ +R + F++++P + ++G K F +S L + L IW L+D D DG
Sbjct: 12 EPWRITEEQREYYVNQFRSLQPDPSSFISGSVAKNFFTKSKLSIPELSYIWELSDADCDG 71
Query: 443 KMNINEFVIACKLISNKLRGFDIPPTLPVSL 473
+ + EF A LI + G+ +P LP +L
Sbjct: 72 ALTLPEFCAAFHLIVARKNGYPLPEGLPPTL 102
Score = 54.3 bits (129), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/95 (33%), Positives = 43/95 (45%)
Query: 270 PPLEWAVPHASKLKYTQLFNTTDRTRSGFLSGPQARNIMVATGLSQGILAQIWNLADMDS 329
P W + + Y F + S F+SG A+N + LS L+ IW L+D D
Sbjct: 10 PDEPWRITEEQREYYVNQFRSLQPDPSSFISGSVAKNFFTKSKLSIPELSYIWELSDADC 69
Query: 330 DGQLSCDEFVLAMHLCDLAKGGEKIPVPLPIDMIP 364
DG L+ EF A HL K G +P LP + P
Sbjct: 70 DGALTLPEFCAAFHLIVARKNGYPLPEGLPPTLQP 104
>pdb|1QJT|A Chain A, Solution Structure Of The Apo Eh1 Domain Of Mouse
Epidermal Growth Factor Receptor Substrate 15, Eps15
Length = 99
Score = 48.9 bits (115), Expect = 6e-06, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 396 FETHFQAMKPVN-GIVTGDQVKGFLMQSGLPVATLGQIWSLADTDQDGKMNINEFVIACK 454
+E +++ ++ N G V FL +SGLP LG+IW LADTD G ++ EF +A +
Sbjct: 13 YEKYYRQVEAGNTGRVLALDAAAFLKKSGLPDLILGKIWDLADTDGKGVLSKQEFFVALR 72
Query: 455 LISNKLRGFDI 465
L++ G ++
Sbjct: 73 LVACAQNGLEV 83
Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 40/82 (48%)
Query: 284 YTQLFNTTDRTRSGFLSGPQARNIMVATGLSQGILAQIWNLADMDSDGQLSCDEFVLAMH 343
Y + + + +G + A + +GL IL +IW+LAD D G LS EF +A+
Sbjct: 13 YEKYYRQVEAGNTGRVLALDAAAFLKKSGLPDLILGKIWDLADTDGKGVLSKQEFFVALR 72
Query: 344 LCDLAKGGEKIPVPLPIDMIPP 365
L A+ G ++ + +PP
Sbjct: 73 LVACAQNGLEVSLSSLSLAVPP 94
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 9/79 (11%)
Query: 273 EWAVPHASKLKYT-------QLFNTTDRTRSGFLSGPQARNIMVATG--LSQGILAQIWN 323
E+ A K+KYT + F D+ +G++S + R++M G L+ + ++
Sbjct: 367 EFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIR 426
Query: 324 LADMDSDGQLSCDEFVLAM 342
AD+D DGQ++ +EFV M
Sbjct: 427 EADIDGDGQVNYEEFVQMM 445
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 9/79 (11%)
Query: 273 EWAVPHASKLKYT-------QLFNTTDRTRSGFLSGPQARNIMVATG--LSQGILAQIWN 323
E+ A K+KYT + F D+ +G++S + R++M G L+ + ++
Sbjct: 368 EFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIR 427
Query: 324 LADMDSDGQLSCDEFVLAM 342
AD+D DGQ++ +EFV M
Sbjct: 428 EADIDGDGQVNYEEFVQMM 446
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 9/79 (11%)
Query: 273 EWAVPHASKLKYT-------QLFNTTDRTRSGFLSGPQARNIMVATG--LSQGILAQIWN 323
E+ A K+KYT + F D+ +G++S + R++M G L+ + ++
Sbjct: 367 EFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIR 426
Query: 324 LADMDSDGQLSCDEFVLAM 342
AD+D DGQ++ +EFV M
Sbjct: 427 EADIDGDGQVNYEEFVQMM 445
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 9/79 (11%)
Query: 273 EWAVPHASKLKYT-------QLFNTTDRTRSGFLSGPQARNIMVATG--LSQGILAQIWN 323
E+ A K+KYT + F D+ +G++S + R++M G L+ + ++
Sbjct: 368 EFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIR 427
Query: 324 LADMDSDGQLSCDEFVLAM 342
AD+D DGQ++ +EFV M
Sbjct: 428 EADIDGDGQVNYEEFVQMM 446
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 40.8 bits (94), Expect = 0.002, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 280 SKLKYTQLFNTTDRTRSGFLSGPQARNIMVATG--LSQGILAQIWNLADMDSDGQLSCDE 337
S+ + + F D+ ++GF+S + R++M G L+ + ++ AD+D DGQ++ DE
Sbjct: 82 SEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYDE 141
Query: 338 FVLAM 342
FV M
Sbjct: 142 FVKVM 146
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 40.4 bits (93), Expect = 0.002, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 36/59 (61%), Gaps = 2/59 (3%)
Query: 286 QLFNTTDRTRSGFLSGPQARNIMVATG--LSQGILAQIWNLADMDSDGQLSCDEFVLAM 342
+ F D+ ++G++S + R++M+ G L+ + Q+ AD+D DGQ++ +EFV M
Sbjct: 87 EAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKMM 145
>pdb|2KN2|A Chain A, Solution Structure Of The C-Terminal Domain Of Soybean
Calmodulin Isoform 4 Fused With The Calmodulin-Binding
Domain Of Ntmkp1
Length = 92
Score = 40.4 bits (93), Expect = 0.002, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 36/59 (61%), Gaps = 2/59 (3%)
Query: 286 QLFNTTDRTRSGFLSGPQARNIMVATG--LSQGILAQIWNLADMDSDGQLSCDEFVLAM 342
+ F D+ ++G++S + R++M+ G L+ + Q+ AD+D DGQ++ +EFV M
Sbjct: 13 EAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKMM 71
>pdb|2ROB|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 C-Terminal Domain
Length = 70
Score = 40.4 bits (93), Expect = 0.002, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 36/59 (61%), Gaps = 2/59 (3%)
Query: 286 QLFNTTDRTRSGFLSGPQARNIMVATG--LSQGILAQIWNLADMDSDGQLSCDEFVLAM 342
+ F D+ ++G++S + R++M+ G L+ + Q+ AD+D DGQ++ +EFV M
Sbjct: 8 EAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKMM 66
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 42/79 (53%), Gaps = 9/79 (11%)
Query: 273 EWAVPHASKLKYT-------QLFNTTDRTRSGFLSGPQARNIMVATG--LSQGILAQIWN 323
E+ + A K+K T + F D+ +G++S + R++M G L+ + ++
Sbjct: 359 EFLIMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIR 418
Query: 324 LADMDSDGQLSCDEFVLAM 342
AD+D DGQ++ +EFV M
Sbjct: 419 EADIDGDGQVNYEEFVQMM 437
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 274 WAVPHASKLKYTQLFNTTDRTRSGFLSGPQARNIMVATG--LSQGILAQIWNLADMDSDG 331
W S+ + + F D+ +G++S + R++M G L+ + ++ AD+D DG
Sbjct: 376 WMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDG 435
Query: 332 QLSCDEFVLAM 342
Q++ +EFV M
Sbjct: 436 QVNYEEFVQMM 446
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 38.9 bits (89), Expect = 0.006, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 280 SKLKYTQLFNTTDRTRSGFLSGPQARNIMVATG--LSQGILAQIWNLADMDSDGQLSCDE 337
S+ K + F D+ +GF+S + R++M G L+ + ++ AD+D DGQ++ +E
Sbjct: 81 SEEKLKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYEE 140
Query: 338 FVLAM 342
FV M
Sbjct: 141 FVQVM 145
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 38.9 bits (89), Expect = 0.006, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 280 SKLKYTQLFNTTDRTRSGFLSGPQARNIMVATG--LSQGILAQIWNLADMDSDGQLSCDE 337
S+ + + F D+ ++GF+S + R++M G L+ + ++ AD+D DGQ++ +E
Sbjct: 82 SEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEE 141
Query: 338 FVLAM 342
FV M
Sbjct: 142 FVKVM 146
>pdb|2RO9|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 C-Terminal Domain
Length = 69
Score = 38.9 bits (89), Expect = 0.006, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 280 SKLKYTQLFNTTDRTRSGFLSGPQARNIMVATG--LSQGILAQIWNLADMDSDGQLSCDE 337
S+ + + F D+ ++GF+S + R++M G L+ + ++ AD+D DGQ++ +E
Sbjct: 2 SEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEE 61
Query: 338 FVLAM 342
FV M
Sbjct: 62 FVKVM 66
>pdb|3PN7|C Chain C, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3PN7|F Chain F, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3TS5|C Chain C, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TS5|F Chain F, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TUY|C Chain C, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
pdb|3TUY|F Chain F, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
Length = 156
Score = 38.9 bits (89), Expect = 0.007, Method: Composition-based stats.
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
Query: 284 YTQLFNTTDRTRSGFLSGPQARNIMVATG--LSQGILAQIWNLADMDSD--GQLSCDEFV 339
Y + F T DR GF+SG + R+++ G LS + +I NL D+ D G + +EFV
Sbjct: 86 YMEAFKTFDREGQGFISGAELRHVLSGLGERLSDEEVDEIINLTDLQEDLEGNVKYEEFV 145
>pdb|2EC6|C Chain C, Placopecten Striated Muscle Myosin Ii
Length = 156
Score = 38.9 bits (89), Expect = 0.007, Method: Composition-based stats.
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
Query: 284 YTQLFNTTDRTRSGFLSGPQARNIMVATG--LSQGILAQIWNLADMDSD--GQLSCDEFV 339
Y + F T DR GF+SG + R+++ G LS + +I NL D+ D G + +EFV
Sbjct: 86 YMEAFKTFDREGQGFISGAELRHVLSGLGERLSDEEVDEIINLTDLQEDLEGNVKYEEFV 145
>pdb|2OS8|C Chain C, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
pdb|2OTG|C Chain C, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
Length = 157
Score = 38.9 bits (89), Expect = 0.007, Method: Composition-based stats.
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
Query: 284 YTQLFNTTDRTRSGFLSGPQARNIMVATG--LSQGILAQIWNLADMDSD--GQLSCDEFV 339
Y + F T DR GF+SG + R+++ G LS + +I NL D+ D G + +EFV
Sbjct: 87 YMEAFKTFDREGQGFISGAELRHVLSGLGERLSDEEVDEIINLTDLQEDLEGNVKYEEFV 146
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 9/79 (11%)
Query: 273 EWAVPHASKLKYT-------QLFNTTDRTRSGFLSGPQARNIMVATG--LSQGILAQIWN 323
E+ A K+K T + F D+ +G++S + R++M G L+ + ++
Sbjct: 334 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIR 393
Query: 324 LADMDSDGQLSCDEFVLAM 342
AD+D DGQ++ +EFV M
Sbjct: 394 EADIDGDGQVNYEEFVQMM 412
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 9/79 (11%)
Query: 273 EWAVPHASKLKYT-------QLFNTTDRTRSGFLSGPQARNIMVATG--LSQGILAQIWN 323
E+ A K+K T + F D+ +G++S + R++M G L+ + ++
Sbjct: 334 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIR 393
Query: 324 LADMDSDGQLSCDEFVLAM 342
AD+D DGQ++ +EFV M
Sbjct: 394 EADIDGDGQVNYEEFVQMM 412
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 9/79 (11%)
Query: 273 EWAVPHASKLKYT-------QLFNTTDRTRSGFLSGPQARNIMVATG--LSQGILAQIWN 323
E+ A K+K T + F D+ +G++S + R++M G L+ + ++
Sbjct: 367 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIR 426
Query: 324 LADMDSDGQLSCDEFVLAM 342
AD+D DGQ++ +EFV M
Sbjct: 427 EADIDGDGQVNYEEFVQMM 445
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 9/79 (11%)
Query: 273 EWAVPHASKLKYT-------QLFNTTDRTRSGFLSGPQARNIMVATG--LSQGILAQIWN 323
E+ A K+K T + F D+ +G++S + R++M G L+ + ++
Sbjct: 331 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIR 390
Query: 324 LADMDSDGQLSCDEFVLAM 342
AD+D DGQ++ +EFV M
Sbjct: 391 EADIDGDGQVNYEEFVQMM 409
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 9/79 (11%)
Query: 273 EWAVPHASKLKYT-------QLFNTTDRTRSGFLSGPQARNIMVATG--LSQGILAQIWN 323
E+ A K+K T + F D+ +G++S + R++M G L+ + ++
Sbjct: 368 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIR 427
Query: 324 LADMDSDGQLSCDEFVLAM 342
AD+D DGQ++ +EFV M
Sbjct: 428 EADIDGDGQVNYEEFVQMM 446
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 9/79 (11%)
Query: 273 EWAVPHASKLKYT-------QLFNTTDRTRSGFLSGPQARNIMVATG--LSQGILAQIWN 323
E+ A K+K T + F D+ +G++S + R++M G L+ + ++
Sbjct: 369 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIR 428
Query: 324 LADMDSDGQLSCDEFVLAM 342
AD+D DGQ++ +EFV M
Sbjct: 429 EADIDGDGQVNYEEFVQMM 447
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 9/79 (11%)
Query: 273 EWAVPHASKLKYT-------QLFNTTDRTRSGFLSGPQARNIMVATG--LSQGILAQIWN 323
E+ A K+K T + F D+ +G++S + R++M G L+ + ++
Sbjct: 368 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIR 427
Query: 324 LADMDSDGQLSCDEFVLAM 342
AD+D DGQ++ +EFV M
Sbjct: 428 EADIDGDGQVNYEEFVQMM 446
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 9/79 (11%)
Query: 273 EWAVPHASKLKYT-------QLFNTTDRTRSGFLSGPQARNIMVATG--LSQGILAQIWN 323
E+ A K+K T + F D+ +G++S + R++M G L+ + ++
Sbjct: 68 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIR 127
Query: 324 LADMDSDGQLSCDEFVLAM 342
AD+D DGQ++ +EFV M
Sbjct: 128 EADIDGDGQVNYEEFVQMM 146
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 37.4 bits (85), Expect = 0.018, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 280 SKLKYTQLFNTTDRTRSGFLSGPQARNIMVATG--LSQGILAQIWNLADMDSDGQLSCDE 337
S+ + + F D+ +GF+S + R++M G L+ + ++ AD+D DGQ++ +E
Sbjct: 78 SEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYEE 137
Query: 338 FVLAM 342
FV M
Sbjct: 138 FVQVM 142
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 37.4 bits (85), Expect = 0.018, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 280 SKLKYTQLFNTTDRTRSGFLSGPQARNIMVATG--LSQGILAQIWNLADMDSDGQLSCDE 337
S+ + + F D+ +GF+S + R++M G L+ + ++ AD+D DGQ++ +E
Sbjct: 81 SEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYEE 140
Query: 338 FVLAM 342
FV M
Sbjct: 141 FVQVM 145
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 37.4 bits (85), Expect = 0.018, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 280 SKLKYTQLFNTTDRTRSGFLSGPQARNIMVATG--LSQGILAQIWNLADMDSDGQLSCDE 337
S+ + + F D+ +GF+S + R++M G L+ + ++ AD+D DGQ++ +E
Sbjct: 81 SEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 140
Query: 338 FVLAM 342
FV M
Sbjct: 141 FVTMM 145
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 37.4 bits (85), Expect = 0.018, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 280 SKLKYTQLFNTTDRTRSGFLSGPQARNIMVATG--LSQGILAQIWNLADMDSDGQLSCDE 337
S+ + + F D+ +GF+S + R++M G L+ + ++ AD+D DGQ++ +E
Sbjct: 82 SEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 141
Query: 338 FVLAM 342
FV M
Sbjct: 142 FVTMM 146
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 37.4 bits (85), Expect = 0.018, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 280 SKLKYTQLFNTTDRTRSGFLSGPQARNIMVATG--LSQGILAQIWNLADMDSDGQLSCDE 337
S+ + + F D+ +GF+S + R++M G L+ + ++ AD+D DGQ++ +E
Sbjct: 79 SEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 138
Query: 338 FVLAM 342
FV M
Sbjct: 139 FVTMM 143
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 37.4 bits (85), Expect = 0.018, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 280 SKLKYTQLFNTTDRTRSGFLSGPQARNIMVATG--LSQGILAQIWNLADMDSDGQLSCDE 337
S+ + + F D+ +GF+S + R++M G L+ + ++ AD+D DGQ++ +E
Sbjct: 82 SEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 141
Query: 338 FVLAM 342
FV M
Sbjct: 142 FVTMM 146
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 37.4 bits (85), Expect = 0.018, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 280 SKLKYTQLFNTTDRTRSGFLSGPQARNIMVATG--LSQGILAQIWNLADMDSDGQLSCDE 337
S+ + + F D+ +GF+S + R++M G L+ + ++ AD+D DGQ++ +E
Sbjct: 81 SEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 140
Query: 338 FVLAM 342
FV M
Sbjct: 141 FVTMM 145
>pdb|1DFK|Z Chain Z, Nucleotide-Free Scallop Myosin S1-Near Rigor State
pdb|1DFL|Z Chain Z, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|1DFL|X Chain X, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
Length = 152
Score = 37.4 bits (85), Expect = 0.020, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
Query: 284 YTQLFNTTDRTRSGFLSGPQARNIMVATG--LSQGILAQIWNLADMDSD--GQLSCDEFV 339
Y + F T DR GF+SG + R+++ A G LS + +I L D+ D G + ++FV
Sbjct: 84 YMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDFV 143
>pdb|1SCM|C Chain C, Structure Of The Regulatory Domain Of Scallop Myosin At
2.8 Angstroms Resolution
Length = 149
Score = 37.4 bits (85), Expect = 0.020, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
Query: 284 YTQLFNTTDRTRSGFLSGPQARNIMVATG--LSQGILAQIWNLADMDSD--GQLSCDEFV 339
Y + F T DR GF+SG + R+++ A G LS + +I L D+ D G + ++FV
Sbjct: 83 YMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDFV 142
>pdb|2W4T|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 151
Score = 37.4 bits (85), Expect = 0.020, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
Query: 284 YTQLFNTTDRTRSGFLSGPQARNIMVATG--LSQGILAQIWNLADMDSD--GQLSCDEFV 339
Y + F T DR GF+SG + R+++ A G LS + +I L D+ D G + ++FV
Sbjct: 83 YMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDFV 142
>pdb|3JTD|C Chain C, Calcium-Free Scallop Myosin Regulatory Domain With
Elc-D19a Point Mutation
Length = 156
Score = 37.4 bits (85), Expect = 0.020, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
Query: 284 YTQLFNTTDRTRSGFLSGPQARNIMVATG--LSQGILAQIWNLADMDSD--GQLSCDEFV 339
Y + F T DR GF+SG + R+++ A G LS + +I L D+ D G + ++FV
Sbjct: 86 YMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDFV 145
>pdb|1KK8|C Chain C, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 154
Score = 37.4 bits (85), Expect = 0.020, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
Query: 284 YTQLFNTTDRTRSGFLSGPQARNIMVATG--LSQGILAQIWNLADMDSD--GQLSCDEFV 339
Y + F T DR GF+SG + R+++ A G LS + +I L D+ D G + ++FV
Sbjct: 86 YMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDFV 145
>pdb|1WDC|C Chain C, Scallop Myosin Regulatory Domain
pdb|1B7T|Z Chain Z, Myosin Digested By Papain
pdb|1KK7|Z Chain Z, Scallop Myosin In The Near Rigor Conformation
pdb|1L2O|C Chain C, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|C Chain C, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|C Chain C, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
pdb|1QVI|Z Chain Z, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|Z Chain Z, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|C Chain C, Structure Of Nucleotide-free Scallop Myosin S1
pdb|3JVT|C Chain C, Calcium-Bound Scallop Myosin Regulatory Domain (Lever Arm)
With Reconstituted Complete Light Chains
Length = 156
Score = 37.4 bits (85), Expect = 0.020, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
Query: 284 YTQLFNTTDRTRSGFLSGPQARNIMVATG--LSQGILAQIWNLADMDSD--GQLSCDEFV 339
Y + F T DR GF+SG + R+++ A G LS + +I L D+ D G + ++FV
Sbjct: 86 YMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDFV 145
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 37.4 bits (85), Expect = 0.020, Method: Composition-based stats.
Identities = 33/120 (27%), Positives = 59/120 (49%), Gaps = 10/120 (8%)
Query: 229 NGWLSTKEKDLEVNNSNLVDLKKTLANMMSDSEKLYNVLGGPPLEWAVPHASKLKYT--- 285
+G ++T+E + + + L +MMS+ ++ N P E+ A K+K T
Sbjct: 24 DGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGNGTVDFP-EFLGMMARKMKDTDNE 82
Query: 286 ----QLFNTTDRTRSGFLSGPQARNIMVATG--LSQGILAQIWNLADMDSDGQLSCDEFV 339
+ F D+ +GF+S + R++M G LS + ++ AD D DGQ++ +EFV
Sbjct: 83 EEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEEVDEMIRAADTDGDGQVNYEEFV 142
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 37.0 bits (84), Expect = 0.022, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 280 SKLKYTQLFNTTDRTRSGFLSGPQARNIMVATG--LSQGILAQIWNLADMDSDGQLSCDE 337
S+ + + F D+ +G++S + R++M G L+ + Q+ AD+D DGQ++ +E
Sbjct: 82 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDQMIREADIDGDGQVNYEE 141
Query: 338 FVLAM 342
FV M
Sbjct: 142 FVQMM 146
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 288 FNTTDRTRSGFLSGPQARNIMVATGLSQGILAQIWNLADMDSDGQLSCDEFVLAMH-LCD 346
FN D +SG ++ + N+ T +S+ + AD + D + DEFV MH +CD
Sbjct: 441 FNLFDTDKSGKITKEELANLFGLTSISEKTWNDVLGEADQNKDNMIDFDEFVSMMHKICD 500
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 36.6 bits (83), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 63/156 (40%), Gaps = 14/156 (8%)
Query: 318 LAQIWNLADMDSDGQLSCDEFVLAMHLCDLAKG--------GEKIPVPLPIDMIPPAFRR 369
L +I+ D ++DG L DE V H KG E + ID + P
Sbjct: 333 LTEIFRKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEGSTIEDQIDSLMPLLDM 392
Query: 370 QRQNSVTLAANVAMDPWNVSRHERTRFETHFQAM-KPVNGIVTGDQVKGFLMQ--SGLPV 426
S+ + +A R R E F+ K +G ++ ++ Q S + +
Sbjct: 393 DGSGSIEYSEFIASAIDRTILLSRERMERAFKMFDKDGSGKISTKELFKLFSQADSSIQM 452
Query: 427 ATLGQIWSLADTDQDGKMNINEFVIACKLISNKLRG 462
L I D ++DG+++ NEFV +++ N +R
Sbjct: 453 EELESIIEQVDNNKDGEVDFNEFV---EMLQNFVRN 485
>pdb|2KZ2|A Chain A, Calmodulin, C-Terminal Domain, F92e Mutant
Length = 94
Score = 36.2 bits (82), Expect = 0.041, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 280 SKLKYTQLFNTTDRTRSGFLSGPQARNIMVATG--LSQGILAQIWNLADMDSDGQLSCDE 337
S+ + + F D+ +G++S + R++M G L+ + ++ AD+D DGQ++ +E
Sbjct: 27 SEEEIREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 86
Query: 338 FVLAM 342
FV M
Sbjct: 87 FVQMM 91
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 149
Score = 36.2 bits (82), Expect = 0.041, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 280 SKLKYTQLFNTTDRTRSGFLSGPQARNIMVATG--LSQGILAQIWNLADMDSDGQLSCDE 337
S+ + + F D+ +GF+S + R++M G L+ + ++ +D+D DGQ++ +E
Sbjct: 82 SEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIRESDIDGDGQVNYEE 141
Query: 338 FVLAM 342
FV M
Sbjct: 142 FVTMM 146
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 35.8 bits (81), Expect = 0.059, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 280 SKLKYTQLFNTTDRTRSGFLSGPQARNIMVATG--LSQGILAQIWNLADMDSDGQLSCDE 337
S+ + + F D+ +G++S + R++M G L+ + ++ AD+D DGQ++ +E
Sbjct: 79 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 138
Query: 338 FVLAM 342
FV M
Sbjct: 139 FVQMM 143
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 35.8 bits (81), Expect = 0.059, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 280 SKLKYTQLFNTTDRTRSGFLSGPQARNIMVATG--LSQGILAQIWNLADMDSDGQLSCDE 337
S+ + + F D+ +G++S + R++M G L+ + ++ AD+D DGQ++ +E
Sbjct: 82 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDEMIREADIDGDGQVNYEE 141
Query: 338 FVLAM 342
FV M
Sbjct: 142 FVQMM 146
>pdb|2COL|B Chain B, Crystal Structure Analysis Of CyaaC-Cam With Pyrophosphate
Length = 67
Score = 35.8 bits (81), Expect = 0.059, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 280 SKLKYTQLFNTTDRTRSGFLSGPQARNIMVATG--LSQGILAQIWNLADMDSDGQLSCDE 337
S+ + + F D+ +G++S + R++M G L+ + ++ AD+D DGQ++ +E
Sbjct: 3 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 62
Query: 338 FVLAM 342
FV M
Sbjct: 63 FVQMM 67
>pdb|1YRU|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin And 1mm
Calcium Chloride
pdb|1YRT|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin
Length = 74
Score = 35.8 bits (81), Expect = 0.059, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 280 SKLKYTQLFNTTDRTRSGFLSGPQARNIMVATG--LSQGILAQIWNLADMDSDGQLSCDE 337
S+ + + F D+ +G++S + R++M G L+ + ++ AD+D DGQ++ +E
Sbjct: 7 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 66
Query: 338 FVLAM 342
FV M
Sbjct: 67 FVQMM 71
>pdb|1ZOT|B Chain B, Crystal Structure Analysis Of The CyaaC-Cam With Pmeapp
Length = 69
Score = 35.8 bits (81), Expect = 0.059, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 280 SKLKYTQLFNTTDRTRSGFLSGPQARNIMVATG--LSQGILAQIWNLADMDSDGQLSCDE 337
S+ + + F D+ +G++S + R++M G L+ + ++ AD+D DGQ++ +E
Sbjct: 3 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 62
Query: 338 FVLAM 342
FV M
Sbjct: 63 FVQMM 67
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 35.8 bits (81), Expect = 0.059, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 280 SKLKYTQLFNTTDRTRSGFLSGPQARNIMVATG--LSQGILAQIWNLADMDSDGQLSCDE 337
S+ + + F D+ +G++S + R++M G L+ + ++ AD+D DGQ++ +E
Sbjct: 79 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 138
Query: 338 FVLAM 342
FV M
Sbjct: 139 FVQMM 143
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 35.8 bits (81), Expect = 0.059, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 280 SKLKYTQLFNTTDRTRSGFLSGPQARNIMVATG--LSQGILAQIWNLADMDSDGQLSCDE 337
S+ + + F D+ +G++S + R++M G L+ + ++ AD+D DGQ++ +E
Sbjct: 81 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDEMIREADIDGDGQVNYEE 140
Query: 338 FVLAM 342
FV M
Sbjct: 141 FVQMM 145
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 35.8 bits (81), Expect = 0.059, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 280 SKLKYTQLFNTTDRTRSGFLSGPQARNIMVATG--LSQGILAQIWNLADMDSDGQLSCDE 337
S+ + + F D+ +G++S + R++M G L+ + ++ AD+D DGQ++ +E
Sbjct: 82 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 141
Query: 338 FVLAM 342
FV M
Sbjct: 142 FVQMM 146
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 35.8 bits (81), Expect = 0.059, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 280 SKLKYTQLFNTTDRTRSGFLSGPQARNIMVATG--LSQGILAQIWNLADMDSDGQLSCDE 337
S+ + + F D+ +G++S + R++M G L+ + ++ AD+D DGQ++ +E
Sbjct: 82 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 141
Query: 338 FVLAM 342
FV M
Sbjct: 142 FVQMM 146
>pdb|1CMF|A Chain A, Nmr Solution Structure Of Apo Calmodulin Carboxy-Terminal
Domain
pdb|1CMG|A Chain A, Nmr Solution Structure Of Calcium-Loaded Calmodulin
Carboxy- Terminal Domain
Length = 73
Score = 35.8 bits (81), Expect = 0.059, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 280 SKLKYTQLFNTTDRTRSGFLSGPQARNIMVATG--LSQGILAQIWNLADMDSDGQLSCDE 337
S+ + + F D+ +G++S + R++M G L+ + ++ AD+D DGQ++ +E
Sbjct: 6 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 65
Query: 338 FVLAM 342
FV M
Sbjct: 66 FVQMM 70
>pdb|1FW4|A Chain A, Crystal Structure Of E. Coli Fragment Tr2c From Calmodulin
To 1.7 A Resolution
pdb|2LQP|A Chain A, Nmr Solution Structure Of The Ca2+-Calmodulin C-Terminal
Domain In A Complex With A Peptide (Nscate) From The
L-Type Voltage-Gated Calcium Channel Alpha1c Subunit
Length = 71
Score = 35.8 bits (81), Expect = 0.059, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 280 SKLKYTQLFNTTDRTRSGFLSGPQARNIMVATG--LSQGILAQIWNLADMDSDGQLSCDE 337
S+ + + F D+ +G++S + R++M G L+ + ++ AD+D DGQ++ +E
Sbjct: 4 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 63
Query: 338 FVLAM 342
FV M
Sbjct: 64 FVQMM 68
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 35.8 bits (81), Expect = 0.059, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 280 SKLKYTQLFNTTDRTRSGFLSGPQARNIMVATG--LSQGILAQIWNLADMDSDGQLSCDE 337
S+ + + F D+ +G++S + R++M G L+ + ++ AD+D DGQ++ +E
Sbjct: 78 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 137
Query: 338 FVLAM 342
FV M
Sbjct: 138 FVQMM 142
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 35.8 bits (81), Expect = 0.059, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 280 SKLKYTQLFNTTDRTRSGFLSGPQARNIMVATG--LSQGILAQIWNLADMDSDGQLSCDE 337
S+ + + F D+ +G++S + R++M G L+ + ++ AD+D DGQ++ +E
Sbjct: 81 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 140
Query: 338 FVLAM 342
FV M
Sbjct: 141 FVQMM 145
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 35.8 bits (81), Expect = 0.059, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 280 SKLKYTQLFNTTDRTRSGFLSGPQARNIMVATG--LSQGILAQIWNLADMDSDGQLSCDE 337
S+ + + F D+ +G++S + R++M G L+ + ++ AD+D DGQ++ +E
Sbjct: 77 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 136
Query: 338 FVLAM 342
FV M
Sbjct: 137 FVQMM 141
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 35.8 bits (81), Expect = 0.059, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 280 SKLKYTQLFNTTDRTRSGFLSGPQARNIMVATG--LSQGILAQIWNLADMDSDGQLSCDE 337
S+ + + F D+ +G++S + R++M G L+ + ++ AD+D DGQ++ +E
Sbjct: 85 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 144
Query: 338 FVLAM 342
FV M
Sbjct: 145 FVQMM 149
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 35.8 bits (81), Expect = 0.059, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 280 SKLKYTQLFNTTDRTRSGFLSGPQARNIMVATG--LSQGILAQIWNLADMDSDGQLSCDE 337
S+ + + F D+ +G++S + R++M G L+ + ++ AD+D DGQ++ +E
Sbjct: 82 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 141
Query: 338 FVLAM 342
FV M
Sbjct: 142 FVQMM 146
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 35.8 bits (81), Expect = 0.059, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 280 SKLKYTQLFNTTDRTRSGFLSGPQARNIMVATG--LSQGILAQIWNLADMDSDGQLSCDE 337
S+ + + F D+ +G++S + R++M G L+ + ++ AD+D DGQ++ +E
Sbjct: 87 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 146
Query: 338 FVLAM 342
FV M
Sbjct: 147 FVQMM 151
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 35.8 bits (81), Expect = 0.059, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 280 SKLKYTQLFNTTDRTRSGFLSGPQARNIMVATG--LSQGILAQIWNLADMDSDGQLSCDE 337
S+ + + F D+ +G++S + R++M G L+ + ++ AD+D DGQ++ +E
Sbjct: 83 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 142
Query: 338 FVLAM 342
FV M
Sbjct: 143 FVQMM 147
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 35.8 bits (81), Expect = 0.059, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 280 SKLKYTQLFNTTDRTRSGFLSGPQARNIMVATG--LSQGILAQIWNLADMDSDGQLSCDE 337
S+ + + F D+ +G++S + R++M G L+ + ++ AD+D DGQ++ +E
Sbjct: 81 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 140
Query: 338 FVLAM 342
FV M
Sbjct: 141 FVQMM 145
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 35.8 bits (81), Expect = 0.059, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 280 SKLKYTQLFNTTDRTRSGFLSGPQARNIMVATG--LSQGILAQIWNLADMDSDGQLSCDE 337
S+ + + F D+ +G++S + R++M G L+ + ++ AD+D DGQ++ +E
Sbjct: 79 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 138
Query: 338 FVLAM 342
FV M
Sbjct: 139 FVQMM 143
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 35.8 bits (81), Expect = 0.059, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 280 SKLKYTQLFNTTDRTRSGFLSGPQARNIMVATG--LSQGILAQIWNLADMDSDGQLSCDE 337
S+ + + F D+ +G++S + R++M G L+ + ++ AD+D DGQ++ +E
Sbjct: 80 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 139
Query: 338 FVLAM 342
FV M
Sbjct: 140 FVQMM 144
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 35.8 bits (81), Expect = 0.059, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 280 SKLKYTQLFNTTDRTRSGFLSGPQARNIMVATG--LSQGILAQIWNLADMDSDGQLSCDE 337
S+ + + F D+ +G++S + R++M G L+ + ++ AD+D DGQ++ +E
Sbjct: 81 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 140
Query: 338 FVLAM 342
FV M
Sbjct: 141 FVQMM 145
>pdb|1F71|A Chain A, Refined Solution Structure Of Calmodulin C-Terminal Domain
pdb|1J7P|A Chain A, Solution Structure Of Calcium Calmodulin C-Terminal Domain
pdb|2K3S|B Chain B, Haddock-Derived Structure Of The Ch-Domain Of The
Smoothelin-Like 1 Complexed With The C-Domain Of
Apocalmodulin
pdb|2KUH|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam C-Terminal Domain
pdb|2LLQ|A Chain A, Solution Nmr-Derived Structure Of Calmodulin C-Lobe Bound
With Er Alpha Peptide
Length = 67
Score = 35.8 bits (81), Expect = 0.062, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 286 QLFNTTDRTRSGFLSGPQARNIMVATG--LSQGILAQIWNLADMDSDGQLSCDEFVLAM 342
+ F D+ +G++S + R++M G L+ + ++ AD+D DGQ++ +EFV M
Sbjct: 6 EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 64
>pdb|2KXW|A Chain A, Structure Of The C-Domain Fragment Of Apo Calmodulin Bound
To The Iq Motif Of Nav1.2
Length = 73
Score = 35.0 bits (79), Expect = 0.094, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 280 SKLKYTQLFNTTDRTRSGFLSGPQARNIMVATG--LSQGILAQIWNLADMDSDGQLSCDE 337
S+ + + F DR +G +S + R++M G L+ + ++ AD+D DG ++ +E
Sbjct: 6 SEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEE 65
Query: 338 FVLAM 342
FV M
Sbjct: 66 FVRMM 70
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 35.0 bits (79), Expect = 0.094, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 280 SKLKYTQLFNTTDRTRSGFLSGPQARNIMVATG--LSQGILAQIWNLADMDSDGQLSCDE 337
S+ + + F DR +G +S + R++M G L+ + ++ AD+D DG ++ +E
Sbjct: 81 SEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEE 140
Query: 338 FVLAM 342
FV M
Sbjct: 141 FVRMM 145
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 35.0 bits (79), Expect = 0.094, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 280 SKLKYTQLFNTTDRTRSGFLSGPQARNIMVATG--LSQGILAQIWNLADMDSDGQLSCDE 337
S+ + + F DR +G +S + R++M G L+ + ++ AD+D DG ++ +E
Sbjct: 81 SEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEE 140
Query: 338 FVLAM 342
FV M
Sbjct: 141 FVRMM 145
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The
Crystal Structure
Length = 142
Score = 33.9 bits (76), Expect = 0.21, Method: Composition-based stats.
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 8/78 (10%)
Query: 273 EWAVPHASKLKYT------QLFNTTDRTRSGFLSGPQARNIMVATG--LSQGILAQIWNL 324
E+ A K+K T + F D+ +G++S + R++M G L+ + ++
Sbjct: 63 EFLTMMARKMKDTDSEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIRE 122
Query: 325 ADMDSDGQLSCDEFVLAM 342
A++D DGQ++ +EFV M
Sbjct: 123 ANIDGDGQVNYEEFVQMM 140
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 33.9 bits (76), Expect = 0.22, Method: Composition-based stats.
Identities = 18/65 (27%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 280 SKLKYTQLFNTTDRTRSGFLSGPQARNIMVATG--LSQGILAQIWNLADMDSDGQLSCDE 337
S+ + + F D+ +G++S + R++M G L+ + ++ A++D DGQ++ +E
Sbjct: 81 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREANIDGDGQVNYEE 140
Query: 338 FVLAM 342
FV M
Sbjct: 141 FVQMM 145
>pdb|3L19|A Chain A, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
pdb|3L19|B Chain B, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
Length = 214
Score = 33.5 bits (75), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 62/148 (41%), Gaps = 18/148 (12%)
Query: 318 LAQIWNLADMDSDGQLSCDEFVLAMHLCDLAKGGEKIPV-PLP-----IDMIPPA--FRR 369
L I+ D + DGQL E + GE++ V LP +D I A F R
Sbjct: 65 LTDIFRHIDKNGDGQLDRQELIDGYSKL----SGEEVAVFDLPQIESEVDAILGAADFDR 120
Query: 370 QRQNSVTLAANVAMDPWNVSRHERTRFETHFQAM-KPVNGIVTGDQVKGFLMQSGLPVAT 428
+ VAMD S + + E+ FQ + NG ++ D++ L T
Sbjct: 121 NGYIDYSEFVTVAMDRK--SLLSKDKLESAFQKFDQDGNGKISVDELASVFGLDHLESKT 178
Query: 429 LGQIWSLADTDQDGKMNINEFVIACKLI 456
++ S D++ DG ++ EF CK+I
Sbjct: 179 WKEMISGIDSNNDGDVDFEEF---CKMI 203
>pdb|2RRT|A Chain A, Solution Structure Of Magnesium-Bound Form Of Calmodulin
C-Domain E104dE140D MUTANT
Length = 72
Score = 33.5 bits (75), Expect = 0.30, Method: Composition-based stats.
Identities = 18/65 (27%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 280 SKLKYTQLFNTTDRTRSGFLSGPQARNIMVATG--LSQGILAQIWNLADMDSDGQLSCDE 337
S+ + + F D+ +G++S R++M G L+ + ++ AD+D DGQ++ ++
Sbjct: 5 SEEEIREAFRVFDKDGNGYISAADLRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYED 64
Query: 338 FVLAM 342
FV M
Sbjct: 65 FVQMM 69
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 62/148 (41%), Gaps = 18/148 (12%)
Query: 318 LAQIWNLADMDSDGQLSCDEFVLAMHLCDLAKGGEKIPV-PLP-----IDMIPPA--FRR 369
L I+ D + DGQL E + GE++ V LP +D I A F R
Sbjct: 348 LTDIFRHIDKNGDGQLDRQELIDGYSKL----SGEEVAVFDLPQIESEVDAILGAADFDR 403
Query: 370 QRQNSVTLAANVAMDPWNVSRHERTRFETHFQAM-KPVNGIVTGDQVKGFLMQSGLPVAT 428
+ VAMD S + + E+ FQ + NG ++ D++ L T
Sbjct: 404 NGYIDYSEFVTVAMD--RKSLLSKDKLESAFQKFDQDGNGKISVDELASVFGLDHLESKT 461
Query: 429 LGQIWSLADTDQDGKMNINEFVIACKLI 456
++ S D++ DG ++ EF CK+I
Sbjct: 462 WKEMISGIDSNNDGDVDFEEF---CKMI 486
>pdb|2AAO|A Chain A, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
pdb|2AAO|B Chain B, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
Length = 166
Score = 33.1 bits (74), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 67/152 (44%), Gaps = 20/152 (13%)
Query: 308 MVATGLSQGILA---QIWNLADMDSDGQLSCDEFVLAMHLCDLAKGGEKIPVPLPIDMIP 364
++A LS+ +A + +N D D GQ++ +E L + G + +D+
Sbjct: 16 VIAESLSEEEIAGLKEXFNXIDADKSGQITFEELKAG-----LKRVGANLKESEILDLXQ 70
Query: 365 PAFRRQRQNSVTL------AANVAMDPWNVSRHERTRFETHFQAMKPVNGIVTGDQVKGF 418
A NS T+ AA + ++ H F T+F K +G +T D+++
Sbjct: 71 AA---DVDNSGTIDYKEFIAATLHLNKIEREDHLFAAF-TYFD--KDGSGYITPDELQQA 124
Query: 419 LMQSGLPVATLGQIWSLADTDQDGKMNINEFV 450
+ G+ + ++ D D DG+++ NEFV
Sbjct: 125 CEEFGVEDVRIEELXRDVDQDNDGRIDYNEFV 156
>pdb|1EJ6|A Chain A, Reovirus Core
pdb|2CSE|U Chain U, Features Of Reovirus Outer-Capsid Protein Mu1 Revealed By
Electron And Image Reconstruction Of The Virion At 7.0-A
Resolution
Length = 1289
Score = 32.7 bits (73), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 5/55 (9%)
Query: 369 RQRQNSV-----TLAANVAMDPWNVSRHERTRFETHFQAMKPVNGIVTGDQVKGF 418
R RQ ++ L AN +PW R++RT Q +P+ G+V Q+ GF
Sbjct: 21 RTRQYTLHDLCSDLDANPGREPWKPLRNQRTNNIVAVQLFRPLQGLVLDTQLYGF 75
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 32.3 bits (72), Expect = 0.62, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 280 SKLKYTQLFNTTDRTRSGFLSGPQARNIMVATG--LSQGILAQIWNLADMDSDGQLSCDE 337
S+ + + F D+ +G++S + R++ G L+ + Q AD+D DGQ++ +E
Sbjct: 82 SEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDQXIREADIDGDGQVNYEE 141
Query: 338 FV 339
FV
Sbjct: 142 FV 143
>pdb|2HQ8|A Chain A, Crystal Structure Of Coelenterazine-binding Protein From
Renilla Muelleri In The Ca Loaded Apo Form
pdb|2HQ8|B Chain B, Crystal Structure Of Coelenterazine-binding Protein From
Renilla Muelleri In The Ca Loaded Apo Form
Length = 186
Score = 32.0 bits (71), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 15/59 (25%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 287 LFNTTDRTRSGFLSGPQARNIMVATG--LSQGILAQIWNLADMDSDGQLSCDEFVLAMH 343
+++ D + G++S P+ + + A G L+ +N D + +GQ+S DEF++ ++
Sbjct: 107 MYDCIDTDKDGYVSLPEFKAFLQAVGPDLTDDKAITCFNTLDFNKNGQISRDEFLVTVN 165
>pdb|2LMT|A Chain A, Nmr Structure Of Androcam
pdb|2LMU|A Chain A, Androcam At High Calcium
pdb|2LMV|A Chain A, Androcam At High Calcium With Three Explicit Ca2+
Length = 148
Score = 32.0 bits (71), Expect = 0.82, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 286 QLFNTTDRTRSGFLSGPQARNIMVATG--LSQGILAQIWNLADMDSDGQLSCDEFV 339
+ F DR GF+S + R +M+ G ++ + ++ AD D DG ++ +EFV
Sbjct: 87 EAFKIFDRDGDGFISPAELRFVMINLGEKVTDEEIDEMIREADFDGDGMINYEEFV 142
>pdb|1OMD|A Chain A, Structure Of Oncomodulin Refined At 1.85 Angstroms
Resolution. An Example Of Extensive Molecular
Aggregation Via Ca2+
pdb|1RRO|A Chain A, Refinement Of Recombinant Oncomodulin At 1.30 Angstroms
Resolution
pdb|2NLN|A Chain A, Solution Structure Of Calcium-Free Rat Beta-Parvalbumin
Length = 108
Score = 31.6 bits (70), Expect = 0.92, Method: Composition-based stats.
Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 8/72 (11%)
Query: 280 SKLKYTQ---LFNTTDRTRSGFLSGPQARNIMV-----ATGLSQGILAQIWNLADMDSDG 331
SK+ +Q +F D +SG+L G + + + A L++ + + AD D DG
Sbjct: 36 SKMSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELTESETKSLMDAADNDGDG 95
Query: 332 QLSCDEFVLAMH 343
++ DEF +H
Sbjct: 96 KIGADEFQEMVH 107
>pdb|2HPS|A Chain A, Crystal Structure Of Coelenterazine-binding Protein From
Renilla Muelleri
Length = 186
Score = 31.6 bits (70), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Query: 288 FNTTDRTRSGFLSGPQARNIMVATG--LSQGILAQIWNLADMDSDGQLSCDEFVLAMH 343
++ D + G++S P+ + + A G L+ +N D + +GQ+S DEF++ ++
Sbjct: 108 YDCIDTDKDGYVSLPEFKAFLQAVGPDLTDDKAITCFNTLDFNKNGQISRDEFLVTVN 165
>pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant)
Length = 449
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 280 SKLKYTQLFNTTDRTRSGFLSGPQARNIMVATG--LSQGILAQIWNLADMDSDGQLSCDE 337
S+ + + F + +G++S Q R++M G L+ + ++ A +D DGQ++ ++
Sbjct: 382 SEEEIREAFRVFGKDGNGYISAAQLRHVMTNLGEKLTDEEVDEMIREAGIDGDGQVNYEQ 441
Query: 338 FVLAM 342
FV M
Sbjct: 442 FVQMM 446
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 30.8 bits (68), Expect = 1.7, Method: Composition-based stats.
Identities = 17/62 (27%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 280 SKLKYTQLFNTTDRTRSGFLSGPQARNIMVATG--LSQGILAQIWNLADMDSDGQLSCDE 337
S+ + + F D+ +G++S + R++ G L+ + + AD+D DGQ++ +E
Sbjct: 81 SEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDEXIREADIDGDGQVNYEE 140
Query: 338 FV 339
FV
Sbjct: 141 FV 142
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 30.8 bits (68), Expect = 1.7, Method: Composition-based stats.
Identities = 17/62 (27%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 280 SKLKYTQLFNTTDRTRSGFLSGPQARNIMVATG--LSQGILAQIWNLADMDSDGQLSCDE 337
S+ + + F D+ +G++S + R++ G L+ + + AD+D DGQ++ +E
Sbjct: 81 SEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDEXIREADIDGDGQVNYEE 140
Query: 338 FV 339
FV
Sbjct: 141 FV 142
>pdb|1TCO|B Chain B, Ternary Complex Of A Calcineurin A Fragment, Calcineurin
B, Fkbp12 And The Immunosuppressant Drug Fk506
(tacrolimus)
pdb|1AUI|B Chain B, Human Calcineurin Heterodimer
pdb|1M63|B Chain B, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
pdb|1M63|F Chain F, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
Length = 169
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 7/84 (8%)
Query: 273 EWAVPHASKLKYTQLFNTTDRTRSGFLSGP---QARNIMVATGLSQGILAQIWNL----A 325
+++V + K F D + G++S Q +MV L L QI + A
Sbjct: 80 QFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINA 139
Query: 326 DMDSDGQLSCDEFVLAMHLCDLAK 349
D D DG++S +EF + D+ K
Sbjct: 140 DKDGDGRISFEEFCAVVGGLDIHK 163
>pdb|1MF8|B Chain B, Crystal Structure Of Human Calcineurin Complexed With
Cyclosporin A And Human Cyclophilin
Length = 170
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 7/84 (8%)
Query: 273 EWAVPHASKLKYTQLFNTTDRTRSGFLSGP---QARNIMVATGLSQGILAQIWNL----A 325
+++V + K F D + G++S Q +MV L L QI + A
Sbjct: 81 QFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINA 140
Query: 326 DMDSDGQLSCDEFVLAMHLCDLAK 349
D D DG++S +EF + D+ K
Sbjct: 141 DKDGDGRISFEEFCAVVGGLDIHK 164
>pdb|1UHH|A Chain A, Crystal Structure Of Cp-Aequorin
pdb|1UHH|B Chain B, Crystal Structure Of Cp-Aequorin
pdb|1UHJ|A Chain A, Crystal Structure Of Br-Aequorin
pdb|1UHJ|B Chain B, Crystal Structure Of Br-Aequorin
Length = 191
Score = 30.4 bits (67), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 27/120 (22%), Positives = 46/120 (38%), Gaps = 32/120 (26%)
Query: 220 VESPWGAFINGWLSTKEKDLEVNNSNLVDLKKTLANMMSDSEKLYNVLGGPPLEWAVPHA 279
VE+ W A+I GW +LE N + TL + D+
Sbjct: 77 VETDWPAYIEGWKKLATDELEKYAKN----EPTLIRIWGDA------------------- 113
Query: 280 SKLKYTQLFNTTDRTRSGFLSGPQARNIMVATGLSQG--ILAQIWNLADMDSDGQLSCDE 337
LF+ D+ ++G ++ + + A G+ Q + + + D+D GQL DE
Sbjct: 114 -------LFDIVDKDQNGAITLDEWKAYTKAAGIIQSSEDCEETFRVCDIDESGQLDVDE 166
>pdb|2LV7|A Chain A, Solution Structure Of Ca2+-Bound Cabp7 N-Terminal Doman
Length = 100
Score = 30.0 bits (66), Expect = 2.7, Method: Composition-based stats.
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Query: 276 VPHASKLKYTQLFNTTDRTRSGFLSGPQARNIMVATGL--SQGILAQIWNLADMDSDGQL 333
+P + + F DR +GF+S + M + G ++ L I DMD DGQ+
Sbjct: 30 IPEDELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQV 89
Query: 334 SCDEFV 339
+EFV
Sbjct: 90 DFEEFV 95
>pdb|1EJ3|A Chain A, Crystal Structure Of Aequorin
pdb|1EJ3|B Chain B, Crystal Structure Of Aequorin
pdb|1UHI|A Chain A, Crystal Structure Of I-aequorin
pdb|1UHI|B Chain B, Crystal Structure Of I-aequorin
pdb|1UHK|A Chain A, Crystal Structure Of N-Aequorin
pdb|1UHK|B Chain B, Crystal Structure Of N-Aequorin
Length = 191
Score = 30.0 bits (66), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 27/120 (22%), Positives = 46/120 (38%), Gaps = 32/120 (26%)
Query: 220 VESPWGAFINGWLSTKEKDLEVNNSNLVDLKKTLANMMSDSEKLYNVLGGPPLEWAVPHA 279
VE+ W A+I GW +LE N + TL + D+
Sbjct: 77 VETDWPAYIEGWKKLATDELEKYAKN----EPTLIRIWGDA------------------- 113
Query: 280 SKLKYTQLFNTTDRTRSGFLSGPQARNIMVATGLSQG--ILAQIWNLADMDSDGQLSCDE 337
LF+ D+ ++G ++ + + A G+ Q + + + D+D GQL DE
Sbjct: 114 -------LFDIVDKDQNGAITLDEWKAYTKAAGIIQSSEDCEETFRVCDIDESGQLDVDE 166
>pdb|1SL8|A Chain A, Calcium-Loaded Apo-Aequorin From Aequorea Victoria
Length = 191
Score = 29.6 bits (65), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 25/120 (20%), Positives = 47/120 (39%), Gaps = 32/120 (26%)
Query: 220 VESPWGAFINGWLSTKEKDLEVNNSNLVDLKKTLANMMSDSEKLYNVLGGPPLEWAVPHA 279
VE+ W +I GW ++L+ + N + TL + D+
Sbjct: 77 VETEWPEYIEGWKRLASEELKRYSKNQI----TLIRLWGDA------------------- 113
Query: 280 SKLKYTQLFNTTDRTRSGFLSGPQARNIMVATGLSQGI--LAQIWNLADMDSDGQLSCDE 337
LF+ D+ ++G +S + + + G+ Q + + + D+D GQL DE
Sbjct: 114 -------LFDIIDKDQNGAISLDEWKAYTKSAGIIQSSEDCEETFRVCDIDESGQLDVDE 166
>pdb|2H2Y|A Chain A, Crystal Structure Of Ubiquitin Conjugating Enzyme E2 From
Plasmodium Falciparum
pdb|2H2Y|B Chain B, Crystal Structure Of Ubiquitin Conjugating Enzyme E2 From
Plasmodium Falciparum
pdb|2H2Y|C Chain C, Crystal Structure Of Ubiquitin Conjugating Enzyme E2 From
Plasmodium Falciparum
pdb|2H2Y|D Chain D, Crystal Structure Of Ubiquitin Conjugating Enzyme E2 From
Plasmodium Falciparum
Length = 136
Score = 29.3 bits (64), Expect = 5.1, Method: Composition-based stats.
Identities = 11/33 (33%), Positives = 19/33 (57%)
Query: 96 PCHPSLTSPTHWYLQGKKYHTHVFTAGQFCMTI 128
P + L P ++LQ HTHV++ G C+++
Sbjct: 76 PDNYPLKPPIVYFLQKPPKHTHVYSNGDICLSV 108
>pdb|1TIZ|A Chain A, Solution Structure Of A Calmodulin-Like Calcium-Binding
Domain From Arabidopsis Thaliana
Length = 67
Score = 29.3 bits (64), Expect = 5.2, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Query: 286 QLFNTTDRTRSGFLSGPQARNIMVATG--LSQGILAQIWNLADMDSDGQLSCDEF 338
++F D+ + G LS + R + +A +Q + + + D+D +G+L+ DEF
Sbjct: 5 RVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEF 59
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 28.9 bits (63), Expect = 6.0, Method: Composition-based stats.
Identities = 16/65 (24%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Query: 280 SKLKYTQLFNTTDRTRSGFLSGPQARNIMVATG--LSQGILAQIWNLADMDSDGQLSCDE 337
S+ + +LF DR G++ + I A+G ++ + + D ++DG++ DE
Sbjct: 91 SEEELAELFRIFDRNADGYIDAEELAEIFRASGEHVTDEEIESLMKDGDKNNDGRIDFDE 150
Query: 338 FVLAM 342
F+ M
Sbjct: 151 FLKMM 155
>pdb|3LL8|B Chain B, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
pdb|3LL8|D Chain D, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
Length = 155
Score = 28.9 bits (63), Expect = 6.4, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 9/76 (11%)
Query: 281 KLKYTQLFNTTDRTRSGFLSGP---QARNIMVATGLSQGILAQIWNL----ADMDSDGQL 333
KL++ F D + G++S Q +MV L L QI + AD D DG++
Sbjct: 76 KLRFA--FRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRI 133
Query: 334 SCDEFVLAMHLCDLAK 349
S +EF + D+ K
Sbjct: 134 SFEEFCAVVGGLDIHK 149
>pdb|2P6B|B Chain B, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
pdb|2P6B|D Chain D, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
Length = 156
Score = 28.9 bits (63), Expect = 6.4, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 9/76 (11%)
Query: 281 KLKYTQLFNTTDRTRSGFLSGP---QARNIMVATGLSQGILAQIWNL----ADMDSDGQL 333
KL++ F D + G++S Q +MV L L QI + AD D DG++
Sbjct: 77 KLRFA--FRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRI 134
Query: 334 SCDEFVLAMHLCDLAK 349
S +EF + D+ K
Sbjct: 135 SFEEFCAVVGGLDIHK 150
>pdb|1OMR|A Chain A, Non-Myristoylated Wild-Type Bovine Recoverin With Calcium
Bound To Ef- Hand 3
pdb|1REC|A Chain A, Three-Dimensional Structure Of Recoverin, A Calcium Sensor
In Vision
pdb|1IKU|A Chain A, Myristoylated Recoverin In The Calcium-Free State, Nmr, 22
Structures
Length = 201
Score = 28.9 bits (63), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 20/34 (58%)
Query: 321 IWNLADMDSDGQLSCDEFVLAMHLCDLAKGGEKI 354
++ D +SDG L E+V+A+H+ K +K+
Sbjct: 68 VFRSFDANSDGTLDFKEYVIALHMTSAGKTNQKL 101
>pdb|1JSA|A Chain A, Myristoylated Recoverin With Two Calciums Bound, Nmr, 24
Structures
Length = 201
Score = 28.9 bits (63), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 18/29 (62%)
Query: 326 DMDSDGQLSCDEFVLAMHLCDLAKGGEKI 354
D +SDG L E+V+A+H+ K +K+
Sbjct: 73 DANSDGTLDFKEYVIALHMTSAGKTNQKL 101
>pdb|2I94|A Chain A, Nmr Structure Of Recoverin Bound To Rhodopsin Kinase
Length = 202
Score = 28.9 bits (63), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 20/34 (58%)
Query: 321 IWNLADMDSDGQLSCDEFVLAMHLCDLAKGGEKI 354
++ D +SDG L E+V+A+H+ K +K+
Sbjct: 69 VFRSFDANSDGTLDFKEYVIALHMTSAGKTNQKL 102
>pdb|2HET|A Chain A, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|B Chain B, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|C Chain C, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|D Chain D, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
Length = 189
Score = 28.9 bits (63), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 20/34 (58%)
Query: 321 IWNLADMDSDGQLSCDEFVLAMHLCDLAKGGEKI 354
++ D +SDG L E+V+A+H+ K +K+
Sbjct: 68 VFRSFDANSDGTLDFKEYVIALHMTSAGKTNQKL 101
>pdb|1NYA|A Chain A, Nmr Solution Structure Of Calerythrin, An Ef-hand Calcium-
Binding Protein
Length = 176
Score = 28.5 bits (62), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 14/52 (26%), Positives = 28/52 (53%)
Query: 292 DRTRSGFLSGPQARNIMVATGLSQGILAQIWNLADMDSDGQLSCDEFVLAMH 343
D+ G ++ + + A G+S+ A+ +N D + +G+LS DE + A+
Sbjct: 112 DKNADGQINADEFAAWLTALGMSKAEAAEAFNQVDTNGNGELSLDELLTAVR 163
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.315 0.131 0.401
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,482,419
Number of Sequences: 62578
Number of extensions: 568608
Number of successful extensions: 1479
Number of sequences better than 100.0: 121
Number of HSP's better than 100.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 89
Number of HSP's that attempted gapping in prelim test: 1341
Number of HSP's gapped (non-prelim): 223
length of query: 487
length of database: 14,973,337
effective HSP length: 103
effective length of query: 384
effective length of database: 8,527,803
effective search space: 3274676352
effective search space used: 3274676352
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 53 (25.0 bits)