Query psy7070
Match_columns 130
No_of_seqs 126 out of 1382
Neff 9.7
Searched_HMMs 29240
Date Fri Aug 16 17:21:01 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7070.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/7070hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4grv_A Neurotensin receptor ty 99.2 3.1E-11 1E-15 90.3 7.0 92 16-109 142-238 (510)
2 2z73_A Rhodopsin; visual pigme 99.1 1.3E-10 4.5E-15 85.1 5.6 93 17-109 141-233 (448)
3 3vw7_A Proteinase-activated re 99.1 3.1E-10 1.1E-14 83.5 7.5 94 16-109 125-221 (484)
4 3uon_A Human M2 muscarinic ace 99.1 3.4E-10 1.1E-14 82.9 7.6 91 16-110 128-220 (467)
5 3v2y_A Sphingosine 1-phosphate 99.1 4.6E-10 1.6E-14 84.1 8.4 84 17-107 167-250 (520)
6 3odu_A C-X-C chemokine recepto 99.1 1.1E-10 3.7E-15 86.3 4.6 93 16-110 151-243 (502)
7 4dkl_A MU-type opioid receptor 99.0 4E-10 1.4E-14 82.3 6.0 94 15-109 120-214 (464)
8 3eml_A Human adenosine A2A rec 99.0 6.3E-10 2.2E-14 81.7 5.4 96 16-111 124-227 (488)
9 4amj_A Beta-1 adrenergic recep 99.0 3.7E-10 1.3E-14 78.4 3.8 97 15-111 115-212 (315)
10 2rh1_A Beta-2-adrenergic recep 98.9 1.4E-09 4.6E-14 81.0 6.5 93 16-109 145-239 (500)
11 1u19_A Rhodopsin; G protein-co 98.9 2.7E-10 9.3E-15 80.4 1.5 87 23-109 149-237 (349)
12 3sn6_R Lysozyme, beta-2 adrene 98.9 3E-09 1E-13 79.4 6.8 94 15-109 286-381 (514)
13 3rze_A Histamine H1 receptor, 98.9 1.4E-09 4.9E-14 79.2 4.9 89 16-109 113-204 (452)
14 4ea3_A Fusion protein of nocic 98.9 4.8E-09 1.6E-13 76.7 6.6 92 16-108 229-321 (434)
15 3pbl_A D(3) dopamine receptor, 98.8 1.2E-08 4.2E-13 74.9 8.1 80 20-109 151-230 (481)
16 2ks9_A Substance-P receptor; w 98.8 2.4E-08 8.4E-13 70.9 7.5 85 23-108 142-228 (364)
17 4eiy_A Adenosine receptor A2A/ 98.7 2.6E-09 8.8E-14 77.7 1.6 95 16-110 134-236 (447)
18 2lnl_A C-X-C chemokine recepto 98.4 1.7E-07 5.7E-12 65.0 3.9 82 25-106 122-204 (296)
19 3dtp_E RLC, myosin regulatory 75.8 0.67 2.3E-05 29.7 0.4 13 1-13 1-13 (196)
20 2rdd_B UPF0092 membrane protei 66.8 7.6 0.00026 18.0 2.9 23 86-108 6-29 (37)
21 3arc_M Photosystem II reaction 61.6 11 0.00038 17.5 3.7 19 81-99 11-29 (36)
22 1jb0_I Photosystem 1 reaction 53.2 17 0.00059 17.1 3.4 23 77-99 12-34 (38)
23 1jzp_A Skeletal dihydropydrine 28.3 33 0.0011 14.7 1.4 8 4-11 7-14 (26)
No 1
>4grv_A Neurotensin receptor type 1, lysozyme chimera; G-protein coupled receptor, G-protein, signaling protein-agonist complex; HET: EPE; 2.80A {Rattus norvegicus}
Probab=99.20 E-value=3.1e-11 Score=90.29 Aligned_cols=92 Identities=15% Similarity=0.152 Sum_probs=69.0
Q ss_pred HHhhhhhcccchhHHHHHHHHHHHHHhhhhhhhhhcceeecC-----CcccccccccccccchHHHHHHHHHHHHHHHHH
Q psy7070 16 KKKKKKKKKKKKKNRVCIGAWLYVFCLTLPPLFGWSCYIPEG-----FMTSCSWDYMSRTMSNRAFYLYLLMFGFILPVA 90 (130)
Q Consensus 16 ~~~~~~~~t~~~~~~~i~~iWi~s~~~~~P~~~~~~~~~~~~-----~~~~C~~~~~~~~~~~~~~~~~~~~~~f~lPl~ 90 (130)
+.+|+..++++++.++++++|++++++++|+++++....... ....|.+.++. .....|..+.+++.|++|++
T Consensus 142 P~~~~~~~t~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~~~~~~~~~~~~~c~~~~~~--~~~~~~~~~~~~~~f~iP~~ 219 (510)
T 4grv_A 142 PFKAKTLMSRSRTKKFISAIWLASALLAIPMLFTMGLQNRSADGTHPGGLVCTPIVDT--ATVKVVIQVNTFMSFLFPML 219 (510)
T ss_dssp CCCCCCCCCCSCCHHHHHHHHHHHHHHHTTHHHHEEEEECSSSSCCGGGEEEEECSCH--HHHHHHHHHHHHHHTHHHHH
T ss_pred cccccccccccccceeehHHHHHHHHHHHHHHHhhcccccccCCCCCCcccccccccc--chhhhhhhhhhhHHHhhhHH
Confidence 345777889999999999999999999999988765433221 12246544432 22455677777788999999
Q ss_pred HHHHHHHHHHHHHHhcccc
Q psy7070 91 VITYCYVFILHVVLAHGKE 109 (130)
Q Consensus 91 ii~~~y~~I~~~l~~~~~~ 109 (130)
+|++||.+|++.++++.+.
T Consensus 220 ii~~~Y~~I~~~l~~~~~~ 238 (510)
T 4grv_A 220 VISILNTVIANKLTVMVNI 238 (510)
T ss_dssp HHHHHHHHHHHHHHTSCTH
T ss_pred HHHHHHHHHHHHHHHHhhh
Confidence 9999999999999876443
No 2
>2z73_A Rhodopsin; visual pigment, GQ-type, G-protein coupled receptor, chromophore, glycoprotein, lipoprotein, membrane, palmitate phosphorylation; HET: BOG RET PLM TWT PC1; 2.50A {Todarodes pacificus} PDB: 3aym_A* 3ayn_A* 2ziy_A*
Probab=99.08 E-value=1.3e-10 Score=85.08 Aligned_cols=93 Identities=33% Similarity=0.710 Sum_probs=71.6
Q ss_pred HhhhhhcccchhHHHHHHHHHHHHHhhhhhhhhhcceeecCCcccccccccccccchHHHHHHHHHHHHHHHHHHHHHHH
Q psy7070 17 KKKKKKKKKKKKNRVCIGAWLYVFCLTLPPLFGWSCYIPEGFMTSCSWDYMSRTMSNRAFYLYLLMFGFILPVAVITYCY 96 (130)
Q Consensus 17 ~~~~~~~t~~~~~~~i~~iWi~s~~~~~P~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~f~lPl~ii~~~y 96 (130)
.+++..++.+++..+++++|++++++++|+++++.....+.....|...+.........|.+..+++.+++|++++++||
T Consensus 141 ~~~~~~~~~~~~~~~i~~~W~~s~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~lP~~ii~~~y 220 (448)
T 2z73_A 141 MAASKKMSHRRAFIMIIFVWLWSVLWAIGPIFGWGAYTLEGVLCNCSFDYISRDSTTRSNILCMFILGFFGPILIIFFCY 220 (448)
T ss_dssp TTTCCCCCHHHHHHHHHHHHHHHHHHHSGGGGTSSCEEECTTSSSEEECCSCCSHHHHHHHHHHHHHTTHHHHHHHHHHH
T ss_pred ccccceechhHHHHHHHHHHHHHHHHHHHHHhceeeeeecCCceeEecccccCCcchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 34566788999999999999999999999888776655444455786665443333455666777778999999999999
Q ss_pred HHHHHHHHhcccc
Q psy7070 97 VFILHVVLAHGKE 109 (130)
Q Consensus 97 ~~I~~~l~~~~~~ 109 (130)
..|++.++++.++
T Consensus 221 ~~I~~~l~~~~~~ 233 (448)
T 2z73_A 221 FNIVMSVSNHEKE 233 (448)
T ss_dssp HHHHTTHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999876544
No 3
>3vw7_A Proteinase-activated receptor 1, lysozyme; high resolution structure, protease-activated receptor 1, in conformation, antagonist vorapaxar; HET: VPX OLC; 2.20A {Homo sapiens}
Probab=99.08 E-value=3.1e-10 Score=83.49 Aligned_cols=94 Identities=14% Similarity=0.221 Sum_probs=67.9
Q ss_pred HHhhhhhcccchhHHHHHHHHHHHHHhhhhhhhhhcceee-cCCccccccccccccc--chHHHHHHHHHHHHHHHHHHH
Q psy7070 16 KKKKKKKKKKKKKNRVCIGAWLYVFCLTLPPLFGWSCYIP-EGFMTSCSWDYMSRTM--SNRAFYLYLLMFGFILPVAVI 92 (130)
Q Consensus 16 ~~~~~~~~t~~~~~~~i~~iWi~s~~~~~P~~~~~~~~~~-~~~~~~C~~~~~~~~~--~~~~~~~~~~~~~f~lPl~ii 92 (130)
+.+|+..++.+++..+++++|++++++++|+++++..... ..+...|...++.... ....|.+...++.|++|+++|
T Consensus 125 P~~~~~~~t~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~ii 204 (484)
T 3vw7_A 125 PMQSLSWRTLGRASFTCLAIWALAIAGVVPLLLKEQTIQVPGLGITTCHDVLSETLLEGYYAYYFSAFSAVFFFVPLIIS 204 (484)
T ss_dssp CC-----CCHHHHHHHHHHHHHHHHHHHHHHHTSCCEEEETTTTEEEESSSCSSCSSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccchhHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCceeeccCCccchhHHHHHHHHHHHHHHHhHHHHHH
Confidence 3456677899999999999999999999999887655432 2344578776654321 233366666778899999999
Q ss_pred HHHHHHHHHHHHhcccc
Q psy7070 93 TYCYVFILHVVLAHGKE 109 (130)
Q Consensus 93 ~~~y~~I~~~l~~~~~~ 109 (130)
++||..|++.++++.+.
T Consensus 205 ~~~Y~~I~~~l~~~~~~ 221 (484)
T 3vw7_A 205 TVCYVSIIRCLSSSANI 221 (484)
T ss_dssp HHHHHHHHHHTTSCCCH
T ss_pred HHHHHHHHHHHhHhhHH
Confidence 99999999999987653
No 4
>3uon_A Human M2 muscarinic acetylcholine, receptor T4 LY fusion protein; G protein-coupled receptor, GPCR, SI protein-antagonist complex; HET: QNB BGC; 3.00A {Homo sapiens} PDB: 4daj_A*
Probab=99.07 E-value=3.4e-10 Score=82.87 Aligned_cols=91 Identities=21% Similarity=0.289 Sum_probs=70.0
Q ss_pred HHhhhhhcccchhHHHHHHHHHHHHHhhhhhhhhhccee--ecCCcccccccccccccchHHHHHHHHHHHHHHHHHHHH
Q psy7070 16 KKKKKKKKKKKKKNRVCIGAWLYVFCLTLPPLFGWSCYI--PEGFMTSCSWDYMSRTMSNRAFYLYLLMFGFILPVAVIT 93 (130)
Q Consensus 16 ~~~~~~~~t~~~~~~~i~~iWi~s~~~~~P~~~~~~~~~--~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~f~lPl~ii~ 93 (130)
+.+|+..++.+++..+++++|++++++++|+++++.... ...+...|...+.. ...|.+...++.|++|+++++
T Consensus 128 P~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~----~~~~~~~~~~~~~~~p~~ii~ 203 (467)
T 3uon_A 128 PLTYPVKRTTKMAGMMIAAAWVLSFILWAPAILFWQFIVGVRTVEDGECYIQFFS----NAAVTFGTAIAAFYLPVIIMT 203 (467)
T ss_dssp TTTSGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCSSCCCCGGGG----SHHHHHHHHHHHTHHHHHHHH
T ss_pred ccccccccchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCcceeecCc----chHHHHHHHHHHHHHHHHHHH
Confidence 346677889999999999999999999999987665431 12233468665542 345777777788999999999
Q ss_pred HHHHHHHHHHHhccccc
Q psy7070 94 YCYVFILHVVLAHGKEM 110 (130)
Q Consensus 94 ~~y~~I~~~l~~~~~~~ 110 (130)
+||+.|++.++++.+..
T Consensus 204 ~~y~~I~~~l~~~~~~~ 220 (467)
T 3uon_A 204 VLYWHISRASKSRINIF 220 (467)
T ss_dssp HHHHHHHHHHTTCCCHH
T ss_pred HHHHHHHHHHHHhhhHH
Confidence 99999999999876543
No 5
>3v2y_A Sphingosine 1-phosphate receptor 1, lysozyme CHIM; EDG receptor, lipid receptor, multiple sclerosi autoimmunity, structural genomics, PSI-biology; HET: ML5 NAG; 2.80A {Homo sapiens} PDB: 3v2w_A*
Probab=99.07 E-value=4.6e-10 Score=84.07 Aligned_cols=84 Identities=20% Similarity=0.345 Sum_probs=60.9
Q ss_pred HhhhhhcccchhHHHHHHHHHHHHHhhhhhhhhhcceeecCCcccccccccccccchHHHHHHHHHHHHHHHHHHHHHHH
Q psy7070 17 KKKKKKKKKKKKNRVCIGAWLYVFCLTLPPLFGWSCYIPEGFMTSCSWDYMSRTMSNRAFYLYLLMFGFILPVAVITYCY 96 (130)
Q Consensus 17 ~~~~~~~t~~~~~~~i~~iWi~s~~~~~P~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~f~lPl~ii~~~y 96 (130)
-+|+..++.+++..+++++|++++++++|+++++... .+...|...++. ....|.+.. ++.|++|+++|++||
T Consensus 167 ~~~~~~~t~~~~~~~i~~~W~~s~~~~~~~~~~~~~~---~~~~~C~~~~~~---~~~~~~~~~-~~~~~lPl~ii~~~Y 239 (520)
T 3v2y_A 167 MKLHNGSNNFRLFLLISACWVISLILGGLPIMGWNCI---SALSSCSTVLPL---YHKHYILFC-TTVFTLLLLSIVILY 239 (520)
T ss_dssp -------CCHHHHHHHHHHHHHHHHHHHTTTTTCBCT---TCGGGBCSSSTT---BBHHHHHHH-HHHHHHHHHHHHHHH
T ss_pred cccccccchhHHHHHHHHHHHHHHHHHHHHHHeeccc---cCCCcccccCCc---cchHHHHHH-HHHHHHHHHHHHHHH
Confidence 3566778999999999999999999999998887654 344589776643 133444443 456999999999999
Q ss_pred HHHHHHHHhcc
Q psy7070 97 VFILHVVLAHG 107 (130)
Q Consensus 97 ~~I~~~l~~~~ 107 (130)
.+|++.++++.
T Consensus 240 ~~I~~~l~~~~ 250 (520)
T 3v2y_A 240 CRIYSLVRTRN 250 (520)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHhhh
Confidence 99999998764
No 6
>3odu_A C-X-C chemokine receptor type 4, lysozyme chimera; structural genomics, PSI-2, protein structure initiative; HET: ITD OLC OLA; 2.50A {Homo sapiens} PDB: 3oe8_A* 3oe6_A* 3oe0_A* 3oe9_A* 2k03_B* 2k04_B 2k05_B*
Probab=99.06 E-value=1.1e-10 Score=86.25 Aligned_cols=93 Identities=23% Similarity=0.390 Sum_probs=71.2
Q ss_pred HHhhhhhcccchhHHHHHHHHHHHHHhhhhhhhhhcceeecCCcccccccccccccchHHHHHHHHHHHHHHHHHHHHHH
Q psy7070 16 KKKKKKKKKKKKKNRVCIGAWLYVFCLTLPPLFGWSCYIPEGFMTSCSWDYMSRTMSNRAFYLYLLMFGFILPVAVITYC 95 (130)
Q Consensus 16 ~~~~~~~~t~~~~~~~i~~iWi~s~~~~~P~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~f~lPl~ii~~~ 95 (130)
+.+|+..++.+++.++++++|++++++++|+++.+.. ....+...|...++.. .+...|.+...++.|++|++++++|
T Consensus 151 P~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~-~~~~~~~~C~~~~~~~-~~~~~~~~~~~~~~~~~p~~ii~~~ 228 (502)
T 3odu_A 151 ATNSQRPRKLLAEKVVYVGVWIPALLLTIPDFIFANV-SEADDRYICDRFYPND-LWVVVFQFQHIMVGLILPGIVILSC 228 (502)
T ss_dssp TTSCHHHHHHHHHTHHHHHTHHHHHHTTHHHHHHEEE-EECSSSEEEEECCSSH-HHHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred ccccccccchhHHHHhhhHHHHHHHHHHHHHHHheee-eccCCceEEeecCCch-hHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456777888899999999999999999998775543 2334455787666542 2345577777778899999999999
Q ss_pred HHHHHHHHHhccccc
Q psy7070 96 YVFILHVVLAHGKEM 110 (130)
Q Consensus 96 y~~I~~~l~~~~~~~ 110 (130)
|..|++.++++.+..
T Consensus 229 y~~I~~~l~~~~~~~ 243 (502)
T 3odu_A 229 YCIIISKLSHSGSNI 243 (502)
T ss_dssp HHHHHHHGGGCSCCH
T ss_pred HHHHHHHHhhcccch
Confidence 999999999876554
No 7
>4dkl_A MU-type opioid receptor, lysozyme chimera; G-protein coupled receptor, 7 transmembrane receptor, signal protein-antagonist complex; HET: BF0 CLR MPG 1PE; 2.80A {Mus musculus} PDB: 4ej4_A* 4djh_A*
Probab=99.01 E-value=4e-10 Score=82.31 Aligned_cols=94 Identities=18% Similarity=0.339 Sum_probs=71.1
Q ss_pred hHHhhhhhcccchhHHHHHHHHHHHHHhhhhhhhhhcceeecCCccccccccccccc-chHHHHHHHHHHHHHHHHHHHH
Q psy7070 15 KKKKKKKKKKKKKKNRVCIGAWLYVFCLTLPPLFGWSCYIPEGFMTSCSWDYMSRTM-SNRAFYLYLLMFGFILPVAVIT 93 (130)
Q Consensus 15 ~~~~~~~~~t~~~~~~~i~~iWi~s~~~~~P~~~~~~~~~~~~~~~~C~~~~~~~~~-~~~~~~~~~~~~~f~lPl~ii~ 93 (130)
.+.+|+..++.+++..+++++|++++++++|+++.... ....+...|...+..... +...|.+..+++.|++|+++++
T Consensus 120 ~P~~~~~~~~~~~~~~~~~~~W~~~~~~~~p~~~~~~~-~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ii~ 198 (464)
T 4dkl_A 120 HPVKALDFRTPRNAKIVNVCNWILSSAIGLPVMFMATT-KYRQGSIDCTLTFSHPTWYWENLLKICVFIFAFIMPVLIIT 198 (464)
T ss_dssp CHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHSBCC-EEETTEEECCBCCSSSHHHHHHHHHHHHHHHTTHHHHHHHH
T ss_pred ccccccccccccHhHHhHHHHHHHHHHHHHHHHHheee-cccCCCceEEeecCCcchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34567778899999999999999999999998774433 333445578766654322 2345667777778999999999
Q ss_pred HHHHHHHHHHHhcccc
Q psy7070 94 YCYVFILHVVLAHGKE 109 (130)
Q Consensus 94 ~~y~~I~~~l~~~~~~ 109 (130)
+||..|++.++++.+.
T Consensus 199 ~~y~~i~~~l~~~~~~ 214 (464)
T 4dkl_A 199 VCYGLMILRLKSVRNI 214 (464)
T ss_dssp HHHHHHHHHCCCCCSH
T ss_pred HHHHHHHHHHHHhcch
Confidence 9999999999876553
No 8
>3eml_A Human adenosine A2A receptor/T4 lysozyme chimera; caffeine, GPCR, membrane protein, LCP, mesophase, structural genomics, PSI-2; HET: ZMA STE; 2.60A {Homo sapiens} PDB: 3qak_A*
Probab=98.97 E-value=6.3e-10 Score=81.73 Aligned_cols=96 Identities=10% Similarity=0.249 Sum_probs=68.2
Q ss_pred HHhhhhhcccchhHHHHHHHHHHHHHhhhhhhhhhcceeec----CCcccccccccc----cccchHHHHHHHHHHHHHH
Q psy7070 16 KKKKKKKKKKKKKNRVCIGAWLYVFCLTLPPLFGWSCYIPE----GFMTSCSWDYMS----RTMSNRAFYLYLLMFGFIL 87 (130)
Q Consensus 16 ~~~~~~~~t~~~~~~~i~~iWi~s~~~~~P~~~~~~~~~~~----~~~~~C~~~~~~----~~~~~~~~~~~~~~~~f~l 87 (130)
+.+|+..++++++..+++++|++++++++|+++++...... .....|...+.. .......|....+++.|++
T Consensus 124 P~~~~~~~~~~~~~~~i~~~W~~s~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (488)
T 3eml_A 124 PLRYNGLVTGTRAKGIIAICWVLSFAIGLTPMLGWNNCGQPKEGKNHSQGCGEGQVACLFEDVVPMNYMVYFNFFACVLV 203 (488)
T ss_dssp GGGSTTTSCHHHHHHHHHHHHHHHHHHHTTGGGTCCSSCC-------CCSSCTTCEECCHHHHSCHHHHHTTTHHHHTHH
T ss_pred ccccccccCHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccccccceeeccccccchhHHHhHHHHHHHH
Confidence 44677788999999999999999999999998877643221 122356544321 1112333555556778999
Q ss_pred HHHHHHHHHHHHHHHHHhcccccc
Q psy7070 88 PVAVITYCYVFILHVVLAHGKEMS 111 (130)
Q Consensus 88 Pl~ii~~~y~~I~~~l~~~~~~~~ 111 (130)
|++++++||..|++.++++.+...
T Consensus 204 P~~ii~~~y~~I~~~l~~~~~~~~ 227 (488)
T 3eml_A 204 PLLLMLGVYLRIFLAARRQLNIFE 227 (488)
T ss_dssp HHHHHHHHHHHHHHHHTCCCCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHH
Confidence 999999999999999998765543
No 9
>4amj_A Beta-1 adrenergic receptor; membrane protein, 7TMR BETA1-adrenoceptor, stabilising mutat biased agonist; HET: CVD 2CV; 2.30A {Meleagris gallopavo} PDB: 2y01_A* 2y02_A* 2y03_A* 2y04_A* 4ami_A* 2y00_A* 2vt4_A* 2ycw_A* 2ycx_A* 2ycy_A* 2ycz_A*
Probab=98.96 E-value=3.7e-10 Score=78.43 Aligned_cols=97 Identities=9% Similarity=0.166 Sum_probs=67.3
Q ss_pred hHHhhhhhcccchhHHHHHHHHHHHHHhhhhhhhhhcceeecCCccccccccccc-ccchHHHHHHHHHHHHHHHHHHHH
Q psy7070 15 KKKKKKKKKKKKKKNRVCIGAWLYVFCLTLPPLFGWSCYIPEGFMTSCSWDYMSR-TMSNRAFYLYLLMFGFILPVAVIT 93 (130)
Q Consensus 15 ~~~~~~~~~t~~~~~~~i~~iWi~s~~~~~P~~~~~~~~~~~~~~~~C~~~~~~~-~~~~~~~~~~~~~~~f~lPl~ii~ 93 (130)
++.+|+...+++++..+++++|++++++++|+.+.........+...|..++... ......|.....++.+++|+++++
T Consensus 115 ~P~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~ip~~ii~ 194 (315)
T 4amj_A 115 SPFRYQSLMTRARAKVIICTVWAISALVSFLPIMMHWWRDEDPQALKCYQDPGCCDFVTNRAYAIASSIISFYIPLLIMI 194 (315)
T ss_dssp CHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCCSHHHHHHHHCTTCCCCCCCHHHHHHHHCCCCCHHHHHHH
T ss_pred cccccccccchhhHHHhhhHHHHHHHHHHHHHHHHHhccccCCCccccccccccchhhcchHHHHHHHHHHHHHHHHHHH
Confidence 3456777889999999999999999999988765433222222334665554322 223456777777778999999999
Q ss_pred HHHHHHHHHHHhcccccc
Q psy7070 94 YCYVFILHVVLAHGKEMS 111 (130)
Q Consensus 94 ~~y~~I~~~l~~~~~~~~ 111 (130)
++|..|++.++++.++..
T Consensus 195 ~~y~~i~~~~~~~~~~~~ 212 (315)
T 4amj_A 195 FVALRVYREAKEQIRKID 212 (315)
T ss_dssp HHHHHHHHHHHTC-----
T ss_pred HHHHHHHHHHHHHHhccC
Confidence 999999999988755443
No 10
>2rh1_A Beta-2-adrenergic receptor/T4-lysozyme chimera; GPCR, 7TM, fusion, lipidic cubic phase, lipidic, mesophase, cholesterol, membrane protein; HET: MAL CAU CLR PLM 12P; 2.40A {Homo sapiens} PDB: 3p0g_A* 3d4s_A* 3ny8_A* 3ny9_A* 3nya_A* 3pds_A*
Probab=98.94 E-value=1.4e-09 Score=81.05 Aligned_cols=93 Identities=13% Similarity=0.221 Sum_probs=66.7
Q ss_pred HHhhhhhcccchhHHHHHHHHHHHHHhhh-hhhhhhcceeecCCccccccccccc-ccchHHHHHHHHHHHHHHHHHHHH
Q psy7070 16 KKKKKKKKKKKKKNRVCIGAWLYVFCLTL-PPLFGWSCYIPEGFMTSCSWDYMSR-TMSNRAFYLYLLMFGFILPVAVIT 93 (130)
Q Consensus 16 ~~~~~~~~t~~~~~~~i~~iWi~s~~~~~-P~~~~~~~~~~~~~~~~C~~~~~~~-~~~~~~~~~~~~~~~f~lPl~ii~ 93 (130)
+.+|+..++++++..+++++|++++++++ |.+++|... ...+...|...+.+. ......|.+..+++.|++|+++|+
T Consensus 145 Pl~~~~~~t~~~~~~~i~~~W~~s~~~~~~p~~~~~~~~-~~~~~~~c~~~~~~~~~~~~~~y~~~~~~~~~~iPl~ii~ 223 (500)
T 2rh1_A 145 PFKYQSLLTKNKARVIILMVWIVSGLTSFLPIQMHWYRA-THQEAINCYAEETCCDFFTNQAYAIASSIVSFYVPLVIMV 223 (500)
T ss_dssp SSTTSCSSCHHHHHHHHHHHHHHHHHHHHHHHHTTTTCC-CSHHHHHHHHCTTCCCCCCCHHHHHHHHHHHTHHHHHHHH
T ss_pred cCcCCeeecccceeehhhHHHHHHHHHHhcchheeeecc-cccCcceecccccccccchhHHHHHHHHHHHHHHHHHHHH
Confidence 34566778999999999999999999985 544444332 112233575544321 223456777777888999999999
Q ss_pred HHHHHHHHHHHhcccc
Q psy7070 94 YCYVFILHVVLAHGKE 109 (130)
Q Consensus 94 ~~y~~I~~~l~~~~~~ 109 (130)
+||..|++.++++.+.
T Consensus 224 ~~Y~~I~~~l~~~~~~ 239 (500)
T 2rh1_A 224 FVYSRVFQEAKRQLNI 239 (500)
T ss_dssp HHHHHHHHHHHHHCSH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999887554
No 11
>1u19_A Rhodopsin; G protein-coupled receptor, membrane protein, retinal protei photoreceptor, signaling protein; HET: MAN NAG BMA RET PLM HTO HTG; 2.20A {Bos taurus} SCOP: f.13.1.2 PDB: 1hzx_A* 1gzm_A* 1l9h_A* 2g87_A* 2hpy_A* 2i35_A* 2i36_A* 2i37_A* 2ped_A* 3oax_A* 3c9l_A* 1jfp_A* 1ln6_A* 1f88_A* 3cap_A* 3dqb_A* 3pqr_A* 3pxo_A* 3c9m_A* 2x72_A* ...
Probab=98.91 E-value=2.7e-10 Score=80.36 Aligned_cols=87 Identities=31% Similarity=0.674 Sum_probs=66.8
Q ss_pred cccchhHHHHHHHHHHHHHhhhhhhhhhcceeecCCccccccccccc--ccchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy7070 23 KKKKKKNRVCIGAWLYVFCLTLPPLFGWSCYIPEGFMTSCSWDYMSR--TMSNRAFYLYLLMFGFILPVAVITYCYVFIL 100 (130)
Q Consensus 23 ~t~~~~~~~i~~iWi~s~~~~~P~~~~~~~~~~~~~~~~C~~~~~~~--~~~~~~~~~~~~~~~f~lPl~ii~~~y~~I~ 100 (130)
.+.+++..+++++|++++++++|+++++.....+.....|...+... ......|.....++.+++|++++++||..|+
T Consensus 149 ~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~ii~~~y~~i~ 228 (349)
T 1u19_A 149 FGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLV 228 (349)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHSGGGTTSSCCEEETTTTEEECCCSCCCGGGTHHHHHHHHHHHTTHHHHHHHHHHHTTTT
T ss_pred eccchhHHHHHHHHHHHHHHHHHHHHheeeeeccCCceeecccccCccccccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 67888889999999999999999988776544444455787665432 1234567777777789999999999999999
Q ss_pred HHHHhcccc
Q psy7070 101 HVVLAHGKE 109 (130)
Q Consensus 101 ~~l~~~~~~ 109 (130)
+.++++.++
T Consensus 229 ~~l~~~~~~ 237 (349)
T 1u19_A 229 FTVKEAAAQ 237 (349)
T ss_dssp TSSCSCCCS
T ss_pred HHHHHhhhh
Confidence 998876543
No 12
>3sn6_R Lysozyme, beta-2 adrenergic receptor; seven transmembrane receptor, nanobody, G protein-coupled RE GPCR, signal transduction, G protein signaling; HET: P0G; 3.20A {Enterobacteria phage T4} PDB: 3kj6_A 2r4s_A 2r4r_A 4gbr_A*
Probab=98.89 E-value=3e-09 Score=79.35 Aligned_cols=94 Identities=13% Similarity=0.252 Sum_probs=66.5
Q ss_pred hHHhhhhhcccchhHHHHHHHHHHHHHhhhhhh-hhhcceeecCCccccccccccc-ccchHHHHHHHHHHHHHHHHHHH
Q psy7070 15 KKKKKKKKKKKKKKNRVCIGAWLYVFCLTLPPL-FGWSCYIPEGFMTSCSWDYMSR-TMSNRAFYLYLLMFGFILPVAVI 92 (130)
Q Consensus 15 ~~~~~~~~~t~~~~~~~i~~iWi~s~~~~~P~~-~~~~~~~~~~~~~~C~~~~~~~-~~~~~~~~~~~~~~~f~lPl~ii 92 (130)
++.+|+..++++++..+++++|++++++++|+. +.+... ...+...|.....+. ......|.+...++.|++|++++
T Consensus 286 ~Pl~~~~~~t~~~~~~~i~~~Wi~s~l~~~~p~~~~~~~~-~~~~~~~c~~~~~~~~~~~~~~y~~~~~~~~~~lP~~ii 364 (514)
T 3sn6_R 286 SPFKYQSLLTKNKARVIILMVWIVSGLTSFLPIQMHWYRA-THQEAINCYAEETCCDFFTNQAYAIASSIVSFYVPLVIM 364 (514)
T ss_dssp SHHHHHHHCCHHHHHHHHHHHHHHHHHTTHHHHHTTTTC----CHHHHHHHSSSCCCCCCCHHHHHHHHHHHTHHHHHHH
T ss_pred CccccchhccchHHHHHHHHHHHHHHHHHhhhhhccceec-ccCcccceeecccccccccccHHHHHHHHHHHHHHHHHH
Confidence 345677788999999999999999999987664 444332 122233554443221 22345677788888899999999
Q ss_pred HHHHHHHHHHHHhcccc
Q psy7070 93 TYCYVFILHVVLAHGKE 109 (130)
Q Consensus 93 ~~~y~~I~~~l~~~~~~ 109 (130)
++||..|++.++++.++
T Consensus 365 ~~~y~~I~~~l~~~~~~ 381 (514)
T 3sn6_R 365 VFVYSRVFQEAKRQLQK 381 (514)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhc
Confidence 99999999999876443
No 13
>3rze_A Histamine H1 receptor, lysozyme chimera; structural genomics, PSI-biology, membrane protein, GPCR NET GPCR, hydrolase; HET: 5EH D7V OLC; 3.10A {Homo sapiens}
Probab=98.89 E-value=1.4e-09 Score=79.19 Aligned_cols=89 Identities=21% Similarity=0.433 Sum_probs=64.9
Q ss_pred HHhhhhhcccchhHHHHHHHHHHHHHhhhhhhhhhcceeec---CCcccccccccccccchHHHHHHHHHHHHHHHHHHH
Q psy7070 16 KKKKKKKKKKKKKNRVCIGAWLYVFCLTLPPLFGWSCYIPE---GFMTSCSWDYMSRTMSNRAFYLYLLMFGFILPVAVI 92 (130)
Q Consensus 16 ~~~~~~~~t~~~~~~~i~~iWi~s~~~~~P~~~~~~~~~~~---~~~~~C~~~~~~~~~~~~~~~~~~~~~~f~lPl~ii 92 (130)
+.+|+..++.+++..+++++|++++++++|.+. +...... .....|..++.. ...|.++..++.|++|++++
T Consensus 113 P~~~~~~~~~~~~~~~i~~~W~~~~~~~~p~~~-~~~~~~~~~~~~~~~C~~~~~~----~~~~~~~~~~~~~~~p~~ii 187 (452)
T 3rze_A 113 PLRYLKYRTKTRASATILGAWFLSFLWVIPILG-WNHFMQQTSVRREDKCETDFYD----VTWFKVMTAIINFYLPTLLM 187 (452)
T ss_dssp SCCTTTTSSHHHHHHHHHHHHHHHGGGHHHHHC-CCC-------CCSSSSCCSCTT----CHHHHHHHHHHHTHHHHHHH
T ss_pred ccccccccchhHHHHHHHHHHHHHHHHHHHHHH-HHhcccccccCCCCeecCCCcc----cHHHHHHHHHHHHHHHHHHH
Confidence 345677889999999999999999999888543 3332211 234467655533 33466777778899999999
Q ss_pred HHHHHHHHHHHHhcccc
Q psy7070 93 TYCYVFILHVVLAHGKE 109 (130)
Q Consensus 93 ~~~y~~I~~~l~~~~~~ 109 (130)
++||..|++.++++.+.
T Consensus 188 ~~~y~~I~~~l~~~~~~ 204 (452)
T 3rze_A 188 LWFYAKIYKAVRQHCNI 204 (452)
T ss_dssp HHHHHHHHHHSCCCCCH
T ss_pred HHHHHHHHHHHHHhccH
Confidence 99999999999876554
No 14
>4ea3_A Fusion protein of nociceptin receptor and cytochr; PSI-biology GPCR network, structural genomics, GPCR membrane 7TM NOP ORL1 cytochrome B562; HET: 0NN OLB OLA OLC; 3.01A {Homo sapiens}
Probab=98.85 E-value=4.8e-09 Score=76.69 Aligned_cols=92 Identities=18% Similarity=0.313 Sum_probs=63.6
Q ss_pred HHhhhhhcccchhHHHHHHHHHHHHHhhhhhhhhhcceeecCCccccccccccccc-chHHHHHHHHHHHHHHHHHHHHH
Q psy7070 16 KKKKKKKKKKKKKNRVCIGAWLYVFCLTLPPLFGWSCYIPEGFMTSCSWDYMSRTM-SNRAFYLYLLMFGFILPVAVITY 94 (130)
Q Consensus 16 ~~~~~~~~t~~~~~~~i~~iWi~s~~~~~P~~~~~~~~~~~~~~~~C~~~~~~~~~-~~~~~~~~~~~~~f~lPl~ii~~ 94 (130)
+.+|+..++++++..+++++|++++++++|..+.... ........|...++.... ....|.+...++.+++|++++++
T Consensus 229 Pl~~~~~~t~~~~~~~i~~~W~~s~~~~~p~~~~~~~-~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~ip~~ii~~ 307 (434)
T 4ea3_A 229 PIRALDVRTSSKAQAVNVAIWALASVVGVPVAIMGSA-QVEDEEIECLVEIPTPQDYWGPVFAICIFLFSFIVPVLVISV 307 (434)
T ss_dssp C-------CHHHHHHHHHHHHHHHHHHHHHHHHHEEE-CCCSSCCCEEECCCSSHHHHHHHHHHHHHHHHTHHHHHHHHH
T ss_pred ccccccccchhhhHHhhhhhhhHHHHHHhhHheeeee-EeecCceeEEEecCChHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3467778899999999999999999999988664322 223344578766654322 23456777777889999999999
Q ss_pred HHHHHHHHHHhccc
Q psy7070 95 CYVFILHVVLAHGK 108 (130)
Q Consensus 95 ~y~~I~~~l~~~~~ 108 (130)
||..|++.++++..
T Consensus 308 ~y~~I~~~l~~~~~ 321 (434)
T 4ea3_A 308 CYSLMIRRLRGVRL 321 (434)
T ss_dssp HHHHHHHHHTTCSS
T ss_pred HHHHHHHHHhhccc
Confidence 99999999987543
No 15
>3pbl_A D(3) dopamine receptor, lysozyme chimera; structural genomics, PSI-2, PSI-biology, protein structure initiative; HET: ETQ MAL; 2.89A {Homo sapiens}
Probab=98.83 E-value=1.2e-08 Score=74.87 Aligned_cols=80 Identities=24% Similarity=0.458 Sum_probs=62.6
Q ss_pred hhhcccchhHHHHHHHHHHHHHhhhhhhhhhcceeecCCcccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy7070 20 KKKKKKKKKNRVCIGAWLYVFCLTLPPLFGWSCYIPEGFMTSCSWDYMSRTMSNRAFYLYLLMFGFILPVAVITYCYVFI 99 (130)
Q Consensus 20 ~~~~t~~~~~~~i~~iWi~s~~~~~P~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~f~lPl~ii~~~y~~I 99 (130)
....+.+++..+++++|++++++++|+++++... .+...|...+ ..|..+..++.|++|++++++||..|
T Consensus 151 ~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~---~~~~~C~~~~-------~~~~~~~~~~~~~ip~~ii~~~y~~i 220 (481)
T 3pbl_A 151 TGQSSCRRVALMITAVWVLAFAVSCPLLFGFNTT---GDPTVCSISN-------PDFVIYSSVVSFYLPFGVTVLVYARI 220 (481)
T ss_dssp TSSSCHHHHHHHHHHHHHHHHHHHHHHHTTTCCC---SSTTCCSCCC-------HHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred cccccHHHHHHHHHHHHHHHHHHHHHHHheeccc---CCCCcccccC-------ccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567888999999999999999999998876542 2334675432 23666677788999999999999999
Q ss_pred HHHHHhcccc
Q psy7070 100 LHVVLAHGKE 109 (130)
Q Consensus 100 ~~~l~~~~~~ 109 (130)
++.++++.+.
T Consensus 221 ~~~l~~~~~~ 230 (481)
T 3pbl_A 221 YVVLKQRRRK 230 (481)
T ss_dssp HHHHHCCCCC
T ss_pred HHHHHHhhhh
Confidence 9999886544
No 16
>2ks9_A Substance-P receptor; water, autodock, NK1, neuropeptide receptor-NEU complex; NMR {Homo sapiens} PDB: 2ksa_A 2ksb_A
Probab=98.76 E-value=2.4e-08 Score=70.89 Aligned_cols=85 Identities=15% Similarity=0.304 Sum_probs=63.3
Q ss_pred cccchhHHHHHHHHHHHHHhhhhhhhhhcceeecCCcccccccccccc--cchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy7070 23 KKKKKKNRVCIGAWLYVFCLTLPPLFGWSCYIPEGFMTSCSWDYMSRT--MSNRAFYLYLLMFGFILPVAVITYCYVFIL 100 (130)
Q Consensus 23 ~t~~~~~~~i~~iWi~s~~~~~P~~~~~~~~~~~~~~~~C~~~~~~~~--~~~~~~~~~~~~~~f~lPl~ii~~~y~~I~ 100 (130)
.+.+++..+++++|++++++++|.++ +.......+...|...++... .....|.+...++.+++|++++++||..|.
T Consensus 142 ~~~~~~~~~i~~~W~~s~~~~~p~~~-~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~ii~~~y~~i~ 220 (364)
T 2ks9_A 142 LSATATKVVICVIWVLALLLAFPQGY-YSTTETMPSRVVCMIEWPEHPNKIYEKVYHICVTVLIYFLPLLVIGYAYTVVG 220 (364)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHTTTTT-TSCCCBCTTCSSBCCCCSCCCTTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred cccchHHHHHHHHHHHHHHHHhHHHH-HhhheecCCCCEEeecCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 57788888999999999999998765 333333344557977765432 233567777777889999999999999999
Q ss_pred HHHHhccc
Q psy7070 101 HVVLAHGK 108 (130)
Q Consensus 101 ~~l~~~~~ 108 (130)
+.++++..
T Consensus 221 ~~l~~~~~ 228 (364)
T 2ks9_A 221 ITLWASEI 228 (364)
T ss_dssp HSSCSCCC
T ss_pred HHHHhcCC
Confidence 99876543
No 17
>4eiy_A Adenosine receptor A2A/soluble cytochrome B562 CH; novel protein engineering, GPCR network, PSI-biology, struct genomics, membrane protein, GPCR; HET: ZMA CLR OLA OLC OLB; 1.80A {Homo sapiens} PDB: 3vg9_A* 3vga_A* 2ydv_A* 2ydo_A* 3uza_A* 3rey_A* 3rfm_A* 3pwh_A* 3uzc_A* 4er9_A
Probab=98.73 E-value=2.6e-09 Score=77.74 Aligned_cols=95 Identities=11% Similarity=0.264 Sum_probs=64.8
Q ss_pred HHhhhhhcccchhHHHHHHHHHHHHHhhhhhhhhhcceeecC----Ccccccccccc----cccchHHHHHHHHHHHHHH
Q psy7070 16 KKKKKKKKKKKKKNRVCIGAWLYVFCLTLPPLFGWSCYIPEG----FMTSCSWDYMS----RTMSNRAFYLYLLMFGFIL 87 (130)
Q Consensus 16 ~~~~~~~~t~~~~~~~i~~iWi~s~~~~~P~~~~~~~~~~~~----~~~~C~~~~~~----~~~~~~~~~~~~~~~~f~l 87 (130)
+.+|+..++.+++..+++++|++++++++|+++++....... ....|...+.. .......+....+++.|++
T Consensus 134 P~~~~~~~~~~~~~~~i~~~Wi~s~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 213 (447)
T 4eiy_A 134 PLRYNGLVTGTRAKGIIAICWVLSFAIGLTPMLGWNNCGQPKEGKNHSQGCGEGQVACLFEDVVPMNYMVYFNFFACVLV 213 (447)
T ss_dssp HHHHHHHSCHHHHHHHHHHHHHHHHHHHTGGGGTCSSTTSCCHHHHHHTTCCTTEEECCHHHHSCHHHHHHCCCCCCCHH
T ss_pred ccccchhhhHHHHHHHHhHHHHHHHHHHHhhhheeccccccCccccccccccccchhhccccccchHHHHHHHHHHHHHH
Confidence 456778889999999999999999999999988765432211 11245443211 1111222333334456899
Q ss_pred HHHHHHHHHHHHHHHHHhccccc
Q psy7070 88 PVAVITYCYVFILHVVLAHGKEM 110 (130)
Q Consensus 88 Pl~ii~~~y~~I~~~l~~~~~~~ 110 (130)
|++++++||..|++.++++.++.
T Consensus 214 P~~ii~~~y~~I~~~l~~~~~~~ 236 (447)
T 4eiy_A 214 PLLLMLGVYLRIFLAARRQLADL 236 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhhh
Confidence 99999999999999998875543
No 18
>2lnl_A C-X-C chemokine receptor type 1; G protein coupled receptor, GPCR, membrane protei transmembrane, 7TM, phospholipid, signaling, signaling PROT; NMR {Homo sapiens}
Probab=98.42 E-value=1.7e-07 Score=64.96 Aligned_cols=82 Identities=24% Similarity=0.474 Sum_probs=56.5
Q ss_pred cchhHHHHHHHHHHHHHhhhhhhhhhcceeecCCcccccccccc-cccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy7070 25 KKKKNRVCIGAWLYVFCLTLPPLFGWSCYIPEGFMTSCSWDYMS-RTMSNRAFYLYLLMFGFILPVAVITYCYVFILHVV 103 (130)
Q Consensus 25 ~~~~~~~i~~iWi~s~~~~~P~~~~~~~~~~~~~~~~C~~~~~~-~~~~~~~~~~~~~~~~f~lPl~ii~~~y~~I~~~l 103 (130)
.+++..+++++|++++++++|+.+++.....+.....|...+.. .......|.+......+++|+.++.++|..+.+.+
T Consensus 122 ~~~~~~~~~~~W~~s~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~i~~~~y~~i~~~~ 201 (296)
T 2lnl_A 122 RHLVKFVCLGCWGLSMNLSLPFFLFRQAYHPNNSSPVCYEVLGNDTAKWRMVLRILPHTFGFIVPLFVMLFCYGFTLRTL 201 (296)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTSSCCCCCTTSCCCCSCCSCCTTTTTTHHHHTTTHHHHHHHHHHHHHHHHHHTTTS
T ss_pred hhhhHheehHHHHHHHHHhcchhhcceeecCCCCCceeeeeccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34566777889999999999998776654333333333333222 22234567777777889999999999999998877
Q ss_pred Hhc
Q psy7070 104 LAH 106 (130)
Q Consensus 104 ~~~ 106 (130)
+++
T Consensus 202 ~~~ 204 (296)
T 2lnl_A 202 FKA 204 (296)
T ss_dssp SSC
T ss_pred HHH
Confidence 654
No 19
>3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain; 20.00A {Avicularia avicularia}
Probab=75.77 E-value=0.67 Score=29.66 Aligned_cols=13 Identities=62% Similarity=0.846 Sum_probs=6.3
Q ss_pred CchHHHHHHHHhH
Q psy7070 1 MEEDEEKKKKKKK 13 (130)
Q Consensus 1 ~~~~~~~~~~~~~ 13 (130)
|-|||.|.+|+|+
T Consensus 1 ~~~~~~~~~~~k~ 13 (196)
T 3dtp_E 1 MGDDEKKEKKKKS 13 (196)
T ss_dssp CCCHHHHHTTSHH
T ss_pred CCccccccccccc
Confidence 5566544444443
No 20
>2rdd_B UPF0092 membrane protein YAJC; drug resistance, multidrug efflux, transporter, antiporter, novel transmembrane helix, ACRB, inner membrane; HET: AIC; 3.50A {Escherichia coli}
Probab=66.81 E-value=7.6 Score=18.04 Aligned_cols=23 Identities=30% Similarity=0.358 Sum_probs=13.1
Q ss_pred HHHHHHH-HHHHHHHHHHHHhccc
Q psy7070 86 ILPVAVI-TYCYVFILHVVLAHGK 108 (130)
Q Consensus 86 ~lPl~ii-~~~y~~I~~~l~~~~~ 108 (130)
++|++++ ++.|..+.+--+++.+
T Consensus 6 ~l~~v~~~~ifYFl~iRPQ~Kr~K 29 (37)
T 2rdd_B 6 ILMLVVFGLIFYFMILRPQQKRTK 29 (37)
T ss_dssp HHHHHHHHHHHHHHTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHH
Confidence 3444433 5677777776655433
No 21
>3arc_M Photosystem II reaction center protein M; PSII, membrane-protein complex, transmembrane alpha-helix, E transport, photosynthesis; HET: OEX CLA PHO BCR PL9 SQD LMG UNL LMT HTG DGD LHG HEM; 1.90A {Thermosynechococcus vulcanus} PDB: 1s5l_M* 2axt_M* 3bz1_M* 3bz2_M* 3kzi_M* 3prq_M* 3prr_M* 3a0b_M* 3a0h_M*
Probab=61.63 E-value=11 Score=17.49 Aligned_cols=19 Identities=16% Similarity=0.252 Sum_probs=14.3
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q psy7070 81 LMFGFILPVAVITYCYVFI 99 (130)
Q Consensus 81 ~~~~f~lPl~ii~~~y~~I 99 (130)
...+.++|.+.+++.|.+.
T Consensus 11 t~Lfi~iPt~FLlilYvqT 29 (36)
T 3arc_M 11 TALFVLVPSVFLIILYVQT 29 (36)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhee
Confidence 3456788999999888854
No 22
>1jb0_I Photosystem 1 reaction centre subunit VIII; membrane protein, multiprotein-pigment complex, photosynthes; HET: CL1 PQN BCR LHG LMG; 2.50A {Synechococcus elongatus} SCOP: f.23.17.1 PDB: 3pcq_I*
Probab=53.18 E-value=17 Score=17.08 Aligned_cols=23 Identities=13% Similarity=0.701 Sum_probs=16.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q psy7070 77 YLYLLMFGFILPVAVITYCYVFI 99 (130)
Q Consensus 77 ~~~~~~~~f~lPl~ii~~~y~~I 99 (130)
.+...+++.+.|.+.|...+..|
T Consensus 12 sI~VPlVglvfPai~Mallf~yI 34 (38)
T 1jb0_I 12 WIFIPVVCWLMPTVVMGLLFLYI 34 (38)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHHH
T ss_pred hhhHhHHHHHHHHHHHHHHHHhh
Confidence 45566678888988888776644
No 23
>1jzp_A Skeletal dihydropydrine receptor; alpha helical peptide, DHPR, D-isomer, signaling protein; NMR {Synthetic} SCOP: j.68.1.1
Probab=28.26 E-value=33 Score=14.66 Aligned_cols=8 Identities=25% Similarity=0.692 Sum_probs=3.1
Q ss_pred HHHHHHHH
Q psy7070 4 DEEKKKKK 11 (130)
Q Consensus 4 ~~~~~~~~ 11 (130)
+||.++.+
T Consensus 7 keEe~kr~ 14 (26)
T 1jzp_A 7 KAEERKRR 14 (26)
T ss_pred HHHHHHHH
Confidence 34443333
Done!