BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy7075
(135 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9Z0R4|ITSN1_MOUSE Intersectin-1 OS=Mus musculus GN=Itsn1 PE=1 SV=2
Length = 1714
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 56/102 (54%), Positives = 76/102 (74%), Gaps = 1/102 (0%)
Query: 5 LCRQVFEKPLKESKILTREEHGQIFVNWKEIIVCNHMFLRALRVRRDMSS-KGDIRMIGD 63
L ++F+KPL ES++LT +E IFVNWKE+I+CN L+ALRVR+ MS K ++MIGD
Sbjct: 1251 LVTEIFQKPLTESELLTEKEVAMIFVNWKELIMCNIKLLKALRVRKKMSGEKMPVKMIGD 1310
Query: 64 ILCEHLPRMTAYVRFCSCQLSAAALLQKLTDQSPEFKTISKK 105
IL LP M Y+RFCSCQL+ AAL+Q+ TD++P+FK K+
Sbjct: 1311 ILSAQLPHMQPYIRFCSCQLNGAALIQQKTDEAPDFKEFVKR 1352
>sp|Q15811|ITSN1_HUMAN Intersectin-1 OS=Homo sapiens GN=ITSN1 PE=1 SV=3
Length = 1721
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 55/102 (53%), Positives = 75/102 (73%), Gaps = 1/102 (0%)
Query: 5 LCRQVFEKPLKESKILTREEHGQIFVNWKEIIVCNHMFLRALRVRRDMSS-KGDIRMIGD 63
L ++F+KPL ES++LT +E IFVNWKE+I+CN L+ALRVR+ MS K ++MIGD
Sbjct: 1258 LVTEIFQKPLMESELLTEKEVAMIFVNWKELIMCNIKLLKALRVRKKMSGEKMPVKMIGD 1317
Query: 64 ILCEHLPRMTAYVRFCSCQLSAAALLQKLTDQSPEFKTISKK 105
IL LP M Y+RFCS QL+ AAL+Q+ TD++P+FK K+
Sbjct: 1318 ILSAQLPHMQPYIRFCSRQLNGAALIQQKTDEAPDFKEFVKR 1359
>sp|Q9NZM3|ITSN2_HUMAN Intersectin-2 OS=Homo sapiens GN=ITSN2 PE=1 SV=3
Length = 1697
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 53/102 (51%), Positives = 67/102 (65%), Gaps = 1/102 (0%)
Query: 5 LCRQVFEKPLKESKILTREEHGQIFVNWKEIIVCNHMFLRALRVRRDMSS-KGDIRMIGD 63
L +VF+K + ES LT E IFVNWKE+I+ N L+ALRVR+ K ++MIGD
Sbjct: 1230 LVVEVFQKRMAESGFLTEGEMALIFVNWKELIMSNTKLLKALRVRKKTGGEKMPVQMIGD 1289
Query: 64 ILCEHLPRMTAYVRFCSCQLSAAALLQKLTDQSPEFKTISKK 105
IL L M AY+RFCSCQL+ AALLQ+ TD+ +FK KK
Sbjct: 1290 ILAAELSHMQAYIRFCSCQLNGAALLQQKTDEDTDFKEFLKK 1331
>sp|Q9Z0R6|ITSN2_MOUSE Intersectin-2 OS=Mus musculus GN=Itsn2 PE=1 SV=2
Length = 1659
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 50/99 (50%), Positives = 64/99 (64%), Gaps = 1/99 (1%)
Query: 8 QVFEKPLKESKILTREEHGQIFVNWKEIIVCNHMFLRALRVRRDMSS-KGDIRMIGDILC 66
+VF+K + E LT + IFVNWKE+I+ N LRALRVR+ K ++MIGDIL
Sbjct: 1195 EVFQKRMAEEGFLTEADMALIFVNWKELIMSNTKLLRALRVRKKTGGEKMPVQMIGDILA 1254
Query: 67 EHLPRMTAYVRFCSCQLSAAALLQKLTDQSPEFKTISKK 105
L M AY+RFCSCQL+ A LLQ+ TD+ +FK KK
Sbjct: 1255 AELSHMQAYIRFCSCQLNGATLLQQKTDEDTDFKEFLKK 1293
>sp|Q7Z628|ARHG8_HUMAN Neuroepithelial cell-transforming gene 1 protein OS=Homo sapiens
GN=NET1 PE=1 SV=1
Length = 596
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 49/102 (48%), Gaps = 3/102 (2%)
Query: 5 LCRQVFEKPLKESKILTREEHGQIFVNWKEIIVCNHMFLRALRVRRDMSSKGDIRMIGDI 64
L R+ + P+ + I++ EE IF + I + L R+ G + IG I
Sbjct: 195 LARKAYHDPMLKLSIMSEEELTHIFGDLDSYIPLHEDLL--TRIGEATKPDGTVEQIGHI 252
Query: 65 LCEHLPRMTAYVRFCSCQLSAAALLQKLTDQSPEFKTISKKC 106
L LPR+ AY +CS QL+A ALL + Q P + ++C
Sbjct: 253 LVSWLPRLNAYRGYCSNQLAAKALLDQ-KKQDPRVQDFLQRC 293
>sp|Q9Z206|ARHG8_MOUSE Neuroepithelial cell-transforming gene 1 protein OS=Mus musculus
GN=Net1 PE=1 SV=2
Length = 595
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 5 LCRQVFEKPLKESKILTREEHGQIFVNWKEIIVCNHMFLRALRVRRDMSSKGDIRMIGDI 64
L R+ + P+ + I++ EE IF + I + L R+ G + IG I
Sbjct: 195 LARKAYHDPMLKLSIMSEEELTHIFGDLDAYIPLHEDLL--ARIGEATKPDGTVEQIGHI 252
Query: 65 LCEHLPRMTAYVRFCSCQLSAAALLQKLTDQSPEFKTISKKC 106
L LP + AY +CS QL+A ALL + Q P + ++C
Sbjct: 253 LVNWLPGLNAYRGYCSNQLAAKALLDQ-KKQDPRVQDFLQRC 293
>sp|Q5ZLX4|ARHG3_CHICK Rho guanine nucleotide exchange factor 3 OS=Gallus gallus
GN=Arhgef3 PE=2 SV=1
Length = 524
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 5 LCRQVFEKPLKESKILTREEHGQIFVNWKEIIVCNHMFLRALRVRRDMSSKGDIRMIGDI 64
L ++ + P+ + I+T +E QIF +I + LR L+ R S G +G I
Sbjct: 143 LAKKAYHDPMLKLSIMTEQELNQIFGTLDSLIPLHEDLLRRLQEVR--KSDGSTEHVGHI 200
Query: 65 LCEHLPRMTAYVRFCSCQLSAAALL 89
L LP + +Y +CS Q++A ALL
Sbjct: 201 LVGWLPCLNSYDSYCSNQVAAKALL 225
>sp|Q91X46|ARHG3_MOUSE Rho guanine nucleotide exchange factor 3 OS=Mus musculus GN=Arhgef3
PE=1 SV=1
Length = 524
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
Query: 5 LCRQVFEKPLKESKILTREEHGQIFVNWKEIIVCNHMFLRALRVRRDMSSKGDIRMIGDI 64
L ++ + P+ + I+T +E QIF +I + L LR R G +G I
Sbjct: 142 LAKKAYHDPMLKLSIMTEQELNQIFGTLDSLIPLHEELLSQLRDVR--KPDGSTEHVGPI 199
Query: 65 LCEHLPRMTAYVRFCSCQLSAAALL 89
L LP +++Y +CS Q++A ALL
Sbjct: 200 LVGWLPCLSSYDSYCSNQVAAKALL 224
>sp|Q9N0A8|ARHG3_MACFA Rho guanine nucleotide exchange factor 3 OS=Macaca fascicularis
GN=ARHGEF3 PE=2 SV=1
Length = 526
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
Query: 5 LCRQVFEKPLKESKILTREEHGQIFVNWKEIIVCNHMFLRALRVRRDMSSKGDIRMIGDI 64
L ++ + P+ + I+T +E QIF +I + L LR R G +G I
Sbjct: 143 LAKKAYHDPMLKLSIMTEQELNQIFGTLDSLIPLHEELLSQLRDVR--KPDGSTEHVGPI 200
Query: 65 LCEHLPRMTAYVRFCSCQLSAAALL 89
L LP +++Y +CS Q++A ALL
Sbjct: 201 LVGWLPCLSSYDSYCSNQVAAKALL 225
>sp|Q9NR81|ARHG3_HUMAN Rho guanine nucleotide exchange factor 3 OS=Homo sapiens GN=ARHGEF3
PE=2 SV=1
Length = 526
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
Query: 5 LCRQVFEKPLKESKILTREEHGQIFVNWKEIIVCNHMFLRALRVRRDMSSKGDIRMIGDI 64
L ++ + P+ + I+T +E QIF +I + L LR R G +G I
Sbjct: 143 LAKKAYHDPMLKLSIMTEQELNQIFGTLDSLIPLHEELLSQLRDVR--KPDGSTEHVGPI 200
Query: 65 LCEHLPRMTAYVRFCSCQLSAAALL 89
L LP +++Y +CS Q++A ALL
Sbjct: 201 LVGWLPCLSSYDSYCSNQVAAKALL 225
>sp|Q5R6F2|ARHG3_PONAB Rho guanine nucleotide exchange factor 3 OS=Pongo abelii GN=ARHGEF3
PE=2 SV=1
Length = 526
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
Query: 5 LCRQVFEKPLKESKILTREEHGQIFVNWKEIIVCNHMFLRALRVRRDMSSKGDIRMIGDI 64
L ++ + P+ + I+T +E QIF +I + L LR R G +G I
Sbjct: 143 LAKKAYHDPMLKLSIMTEQELNQIFGTLDSLIPLHEELLSQLRDVR--KPDGSTEHVGPI 200
Query: 65 LCEHLPRMTAYVRFCSCQLSAAALL 89
L LP +++Y +CS Q++A ALL
Sbjct: 201 LVGWLPCLSSYDSYCSNQVAAKALL 225
>sp|O15013|ARHGA_HUMAN Rho guanine nucleotide exchange factor 10 OS=Homo sapiens
GN=ARHGEF10 PE=1 SV=4
Length = 1369
Score = 43.9 bits (102), Expect = 3e-04, Method: Composition-based stats.
Identities = 32/104 (30%), Positives = 52/104 (50%), Gaps = 9/104 (8%)
Query: 1 MKTILCRQVFEKPLKE--SKILTREEHGQIFVNWKEIIVCNHMFLRALRVRRDMSSKGDI 58
+K IL + +EKPL E K+L+ + +F KEI+ C+ +F AL R +S +
Sbjct: 440 LKRIL--EQYEKPLSEMEPKVLSERKLKTVFYRVKEILQCHSLFQIALASR--VSEWDSV 495
Query: 59 RMIGDILCEHLPR---MTAYVRFCSCQLSAAALLQKLTDQSPEF 99
MIGD+ + + AY + + +A A+L+K P F
Sbjct: 496 EMIGDVFVASFSKSMVLDAYSEYVNNFSTAVAVLKKTCATKPAF 539
>sp|Q3U5C8|ARHGG_MOUSE Rho guanine nucleotide exchange factor 16 OS=Mus musculus
GN=Arhgef16 PE=1 SV=3
Length = 713
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Query: 20 LTREEHGQIFVNWKEIIVCNHMFLRALRVRRDMSSKGDIRMIGDILCEHLPR-MTAYVRF 78
+T+ EH +F N +++ + F AL R ++ + I DIL +H Y+ +
Sbjct: 324 MTQTEHHHLFSNILDVMSASQKFFEALEQRH--KAQVCVEDISDILEDHAQHHFHPYIAY 381
Query: 79 CSCQLSAAALLQKLTDQSPEFKTISKK 105
CS ++ LQKL++ + F+ + K+
Sbjct: 382 CSNEVYQQRTLQKLSNSNAAFRDVLKE 408
>sp|Q9Y7U6|RGF1_SCHPO Rho1 guanine nucleotide exchange factor 1 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=rgf1 PE=1 SV=1
Length = 1334
Score = 37.7 bits (86), Expect = 0.020, Method: Composition-based stats.
Identities = 35/136 (25%), Positives = 55/136 (40%), Gaps = 9/136 (6%)
Query: 7 RQVFEKPLKESKILTREEHGQ----IFVNWKEIIVCNHMFLRALRVRRDMSSKGDIRMIG 62
R + KPL S + + + +F+N E+ N AL R++ K + I
Sbjct: 644 RDYWIKPLWASSCIPERKKEKFIRTVFLNALEVQAVNSKLAEALTKRQNY--KPIVDNIA 701
Query: 63 DILCEHLPRMTAYVRFCSCQLSAAALLQKLTDQSPEFKTISKKCRWI--SRIFLLETETI 120
DI EH+P+ ++R+ + QL +K +P F + SR L
Sbjct: 702 DIFLEHVPKFEPFIRYGAGQLYGKYEFEKEKSSNPAFAKFVSDVERLKESRKLELNGYLT 761
Query: 121 SPLLKLIS-PLLKEIV 135
P +L PLL E V
Sbjct: 762 KPTTRLARYPLLLEAV 777
>sp|Q60992|VAV2_MOUSE Guanine nucleotide exchange factor VAV2 OS=Mus musculus GN=Vav2
PE=1 SV=1
Length = 868
Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 58/121 (47%), Gaps = 8/121 (6%)
Query: 19 ILTREEHGQIFVNWKEIIVCNHMFLRALRVRRDMSSKGDIRMIGDILCEHLPRMTAYVRF 78
+L+ + +F+N +++I +H FLRA+ D+S + + E R+ Y +
Sbjct: 226 VLSPADMAAVFINLEDLIKVHHSFLRAI----DVSMMAGGSTLAKVFLEFKERLLIYGEY 281
Query: 79 CSCQLSAAALLQKLTDQSPEFKTISKKC--RWISRIFLLETETISPLLKLISP--LLKEI 134
CS A + L +L +F+ ++C R F L+ + P+ +++ LLKE+
Sbjct: 282 CSHMEHAQSTLNQLLASREDFRQKVEECTLRVQDGKFKLQDLLVVPMQRVLKYHLLLKEL 341
Query: 135 V 135
+
Sbjct: 342 L 342
>sp|P51862|ROM2_YEAST RHO1 GDP-GTP exchange protein 2 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=ROM2 PE=1 SV=1
Length = 1356
Score = 37.0 bits (84), Expect = 0.037, Method: Composition-based stats.
Identities = 26/99 (26%), Positives = 46/99 (46%), Gaps = 6/99 (6%)
Query: 5 LCRQVFEKPLKESKILTREEHG----QIFVNWKEIIVCNHMFLRALRVRRDMSSKGDIRM 60
+ R F K L E+ I++ + +F + +I N FL+AL R+ S +R
Sbjct: 680 ITRDTFMKTLAETNIISADIRKNFIKHVFAHINDIYSVNRRFLKALTDRQRSSPV--VRG 737
Query: 61 IGDILCEHLPRMTAYVRFCSCQLSAAALLQKLTDQSPEF 99
IGDI+ +P +V + + + A L++ +P F
Sbjct: 738 IGDIVLRFIPFFEPFVSYVASRPYAKYLIETQRSVNPYF 776
>sp|P0C6P5|ARG28_RAT Rho guanine nucleotide exchange factor 28 OS=Rattus norvegicus
GN=Arhgef28 PE=1 SV=1
Length = 1700
Score = 36.2 bits (82), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 64/148 (43%), Gaps = 20/148 (13%)
Query: 4 ILCRQVFEKPLKESKILTREEHGQIFVNWKEIIVCNHMFLRALRVRRDMSSKGD-----I 58
++ +VF K +KE L +IF E++ + F +++ RR S G+ I
Sbjct: 868 LIMSEVFRKGMKEELQLDHSTVDRIFPCLDELLETHKHFFFSMKERRQESCTGNDRNFVI 927
Query: 59 RMIGDILCEHLPRMTA------YVRFCSCQLSAAALLQKLTDQSPEFKTISK-------- 104
IGDIL + A Y FCS A +L ++L Q+ +F+ K
Sbjct: 928 NQIGDILVQQFSEENASKMKRIYGDFCSHHKEAMSLFKELQ-QNKKFQNFIKIRNSNLLA 986
Query: 105 KCRWISRIFLLETETISPLLKLISPLLK 132
+ R I LL T+ I+ L+ +L+
Sbjct: 987 RRRGIPECILLVTQRITKYPVLVERILQ 1014
>sp|P97433|ARG28_MOUSE Rho guanine nucleotide exchange factor 28 OS=Mus musculus
GN=Arhgef28 PE=1 SV=1
Length = 1693
Score = 35.8 bits (81), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 49/112 (43%), Gaps = 12/112 (10%)
Query: 4 ILCRQVFEKPLKESKILTREEHGQIFVNWKEIIVCNHMFLRALRVRRDMSSKGD-----I 58
++ +VF K +KE L +IF E++ + F +++ RR S G I
Sbjct: 866 LIMSEVFRKGMKEELQLDHSTVDKIFPCLDELLETHRHFFFSMKERRQESCAGSDRNFVI 925
Query: 59 RMIGDILCEHLPRMTA------YVRFCSCQLSAAALLQKLTDQSPEFKTISK 104
IGDIL + A Y FCS A +L ++L Q+ +F+ K
Sbjct: 926 NQIGDILVQQFSEENASKMKRIYGEFCSHHKEAMSLFKEL-QQNKKFQNFIK 976
>sp|P53046|ROM1_YEAST RHO1 GDP-GTP exchange protein 1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=ROM1 PE=1 SV=2
Length = 1155
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 45/101 (44%), Gaps = 10/101 (9%)
Query: 5 LCRQVFEKPLKESKILTREEH----GQIFVNWKEIIVCNHMFLRALRVRRDMSS--KGDI 58
+ R F K L E+ I+ + +F + EI N FL+AL R+ +S G
Sbjct: 485 IIRDTFMKKLLETNIIPSDVRINFVKHVFAHINEIYSVNREFLKALAQRQSLSPICPG-- 542
Query: 59 RMIGDILCEHLPRMTAYVRFCSCQLSAAALLQKLTDQSPEF 99
I DI ++LP ++ + + + A L++ +P F
Sbjct: 543 --IADIFLQYLPFFDPFLSYIASRPYAKYLIETQRSVNPNF 581
>sp|B0WSB8|TRMB_CULQU tRNA (guanine-N(7)-)-methyltransferase OS=Culex quinquefasciatus
GN=CPIJ009694 PE=3 SV=1
Length = 239
Score = 33.5 bits (75), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 28/49 (57%)
Query: 57 DIRMIGDILCEHLPRMTAYVRFCSCQLSAAALLQKLTDQSPEFKTISKK 105
D+R + + +C+H+ + A+ R ++ A L +KL D S E K +++
Sbjct: 179 DVRDLHEWMCKHIEQHPAFERLSEAEVEADILSEKLLDSSEEGKKVTRN 227
>sp|P52735|VAV2_HUMAN Guanine nucleotide exchange factor VAV2 OS=Homo sapiens GN=VAV2
PE=1 SV=2
Length = 878
Score = 33.1 bits (74), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 41/88 (46%), Gaps = 4/88 (4%)
Query: 19 ILTREEHGQIFVNWKEIIVCNHMFLRALRVRRDMSSKGDIRMIGDILCEHLPRMTAYVRF 78
+L+ + +F+N +++I +H FLRA+ D+S + + + R+ Y +
Sbjct: 231 VLSPADMAAVFINLEDLIKVHHSFLRAI----DVSVMVGGSTLAKVFLDFKERLLIYGEY 286
Query: 79 CSCQLSAAALLQKLTDQSPEFKTISKKC 106
CS A L +L +F+ ++C
Sbjct: 287 CSHMEHAQNTLNQLLASREDFRQKVEEC 314
>sp|Q96DR7|ARHGQ_HUMAN Rho guanine nucleotide exchange factor 26 OS=Homo sapiens
GN=ARHGEF26 PE=1 SV=4
Length = 871
Score = 33.1 bits (74), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 39/87 (44%), Gaps = 3/87 (3%)
Query: 17 SKILTREEHGQIFVNWKEIIVCNHMFLRALRVRRDMSSKGDIRMIGDILCEHLPR-MTAY 75
S +T+ E +F N ++ + F L R + I I DI+ +H Y
Sbjct: 472 SDTMTKTERHHLFSNITDVCEASKKFFIELEARHQNNIF--IDDISDIVEKHTASTFDPY 529
Query: 76 VRFCSCQLSAAALLQKLTDQSPEFKTI 102
V++C+ ++ LQKL +P FK +
Sbjct: 530 VKYCTNEVYQQRTLQKLLATNPSFKEV 556
>sp|Q5VV41|ARHGG_HUMAN Rho guanine nucleotide exchange factor 16 OS=Homo sapiens
GN=ARHGEF16 PE=1 SV=1
Length = 709
Score = 32.7 bits (73), Expect = 0.62, Method: Composition-based stats.
Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Query: 20 LTREEHGQIFVNWKEIIVCNHMFLRALRVRRDMSSKGDIRMIGDILCEHLPR-MTAYVRF 78
+T+ EH +F N +++ + F L R ++ + I DIL EH + Y+ +
Sbjct: 320 VTQMEHHHLFSNILDVLGASQRFFEDLEQRH--KAQVLVEDISDILEEHAEKHFHPYIAY 377
Query: 79 CSCQLSAAALLQKLTDQSPEFK 100
CS ++ LQKL + F+
Sbjct: 378 CSNEVYQQRTLQKLISSNAAFR 399
>sp|P54100|VAV_RAT Proto-oncogene vav OS=Rattus norvegicus GN=Vav1 PE=2 SV=1
Length = 843
Score = 32.7 bits (73), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 5/87 (5%)
Query: 7 RQVFEKPLKESKILTREEHGQIFVNWKEIIVCNHMFLRALRVRRDMSSKGDIRMIGDILC 66
+Q F KPL+ + L ++ IFVN +E++ + FL+ L+ D S M+ +
Sbjct: 217 QQHFMKPLQ--RFLKPQDMETIFVNIEELLSVHTHFLKELK---DALSGPGATMLYQVFI 271
Query: 67 EHLPRMTAYVRFCSCQLSAAALLQKLT 93
++ R Y R+CS SA L ++
Sbjct: 272 KYKERFLVYGRYCSQVESAIKHLDQVA 298
>sp|Q9TW28|MYOM_DICDI Myosin-M heavy chain OS=Dictyostelium discoideum GN=myoM PE=1 SV=1
Length = 1737
Score = 32.3 bits (72), Expect = 0.95, Method: Composition-based stats.
Identities = 28/127 (22%), Positives = 59/127 (46%), Gaps = 5/127 (3%)
Query: 8 QVFEKPLKESKILTREEHGQIFVNWKEIIVCNHMFLRALRVRRDMSSKGDIRMIGDILCE 67
+VF P++E ++L+ ++ +F N + + N L+AL +D + +G +
Sbjct: 1413 EVFLNPIREKQLLSAKDINSLFSNIEILFSINMNVLKAL--EKDKDPLCENISVGQTFLD 1470
Query: 68 HLPRMTAYVRFCSCQLSAAALLQKLTDQSPEFKTISKKCR--WISRIFLLETETISPLLK 125
+ Y +CS Q +A +L++ ++ F+ + C + R L + I P+ +
Sbjct: 1471 MSHYLKMYTTYCSNQQNALKILEEEKIKNQPFREYLEFCMNDSVCRGLPLNSFIIKPVQR 1530
Query: 126 LIS-PLL 131
+ PLL
Sbjct: 1531 ICKYPLL 1537
>sp|Q9Z1I6|ARHG1_RAT Rho guanine nucleotide exchange factor 1 OS=Rattus norvegicus
GN=Arhgef1 PE=1 SV=1
Length = 919
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 39/97 (40%), Gaps = 7/97 (7%)
Query: 9 VFEKPLKESKILTREEHGQIFVNWKEIIVCNHMFLRALRVRRDMSSKGDIRMIGDILCEH 68
+F +P+ E EE IF + E+I + +FL L RR S I IGD+L
Sbjct: 439 LFYQPMAEGGFFPLEELQNIFPSLDELIEVHSLFLDRLMKRRQESGYL-IEEIGDVLLAR 497
Query: 69 LPRMTA------YVRFCSCQLSAAALLQKLTDQSPEF 99
RFCS Q A L+ + P F
Sbjct: 498 FDGAEGSWFQKISSRFCSRQSFALEQLKAKQRKEPRF 534
>sp|Q9NR80|ARHG4_HUMAN Rho guanine nucleotide exchange factor 4 OS=Homo sapiens GN=ARHGEF4
PE=1 SV=3
Length = 690
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 39/89 (43%), Gaps = 1/89 (1%)
Query: 5 LCRQVFEKPLKESKILTREEHGQIFVNWKEIIVCNHMFLRALRVRRDMSSKGDIRMIGDI 64
+C + K + + + E+ IF N ++I C F++AL R + + + +G
Sbjct: 306 ICEGYVRQCRKRADMFSEEQLRTIFGNIEDIYRCQKAFVKALEQRFNRE-RPHLSELGAC 364
Query: 65 LCEHLPRMTAYVRFCSCQLSAAALLQKLT 93
EH Y +C+ +A L +LT
Sbjct: 365 FLEHQADFQIYSEYCNNHPNACVELSRLT 393
>sp|Q7TNR9|ARHG4_MOUSE Rho guanine nucleotide exchange factor 4 OS=Mus musculus GN=Arhgef4
PE=2 SV=2
Length = 484
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/128 (21%), Positives = 56/128 (43%), Gaps = 7/128 (5%)
Query: 5 LCRQVFEKPLKESKILTREEHGQIFVNWKEIIVCNHMFLRALRVRRDMSSKGDIRMIGDI 64
+C + K + + E+ IF N ++I C F++AL + + + + + +G
Sbjct: 100 ICEGYVRQCRKREDMFSEEQLRTIFGNIEDIYRCQKAFVKALEQKFN-TERPHLSELGAC 158
Query: 65 LCEHLPRMTAYVRFCSCQLSAAALLQKLTDQSPEFKTISKKCRWISRIFLLETETISPLL 124
EH Y +C+ +A L +LT S ++ + CR + R+ + +
Sbjct: 159 FLEHQADFQIYSEYCNNHPNACVELSRLTKLS-KYVYFFEACRLLQRMIDISLDGF---- 213
Query: 125 KLISPLLK 132
L++P+ K
Sbjct: 214 -LLTPVQK 220
>sp|Q8N1W1|ARG28_HUMAN Rho guanine nucleotide exchange factor 28 OS=Homo sapiens GN=ARHGEF28
PE=1 SV=3
Length = 1705
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 58/144 (40%), Gaps = 20/144 (13%)
Query: 8 QVFEKPLKESKILTREEHGQIFVNWKEIIVCNHMFLRALRVRRDMSSKGDIRM-----IG 62
++F K +KE L +IF E++ + F +++ RR S G R IG
Sbjct: 873 EIFRKGMKEELQLDHSTVDKIFPCLDELLEIHRHFFYSMKERRQESCAGSDRNFVIDRIG 932
Query: 63 DILCEHLPRMTA------YVRFCSCQLSAAALLQKLTDQSPEFKTISK--------KCRW 108
DIL + A Y FC C A L K Q+ +F+ K + R
Sbjct: 933 DILVQQFSEENASKMKKIYGEFC-CHHKEAVNLFKELQQNKKFQNFIKLRNSNLLARRRG 991
Query: 109 ISRIFLLETETISPLLKLISPLLK 132
I LL T+ I+ L+ +L+
Sbjct: 992 IPECILLVTQRITKYPVLVERILQ 1015
>sp|Q0IEN3|TRMB_AEDAE tRNA (guanine-N(7)-)-methyltransferase OS=Aedes aegypti
GN=AAEL009156 PE=3 SV=1
Length = 245
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 13/49 (26%), Positives = 28/49 (57%)
Query: 57 DIRMIGDILCEHLPRMTAYVRFCSCQLSAAALLQKLTDQSPEFKTISKK 105
D++ + + +C+H+ + A+ R ++ A L +KL D S E K +++
Sbjct: 185 DVKDLHEWMCKHIEQHPAFERLTDDEVKADVLSEKLLDSSEEGKKVTRN 233
>sp|O15085|ARHGB_HUMAN Rho guanine nucleotide exchange factor 11 OS=Homo sapiens
GN=ARHGEF11 PE=1 SV=1
Length = 1522
Score = 30.8 bits (68), Expect = 2.6, Method: Composition-based stats.
Identities = 34/142 (23%), Positives = 65/142 (45%), Gaps = 23/142 (16%)
Query: 9 VFEKPLKESKILTREEHGQIFVNWKEIIVCNHMFLRALRVRRDMSSKGDIRMIGDILC-- 66
+F + +K+ ++ REE ++F N E+I ++ + A++ R+ I+ I D++
Sbjct: 759 IFYQRMKKENLMPREELARLFPNLPELIEIHNSWCEAMKKLREEGPI--IKEISDLMLAR 816
Query: 67 ------EHLPRMTAYVRFCSCQLSAAALLQKLTDQSPEFKTISK------KCRWISRIFL 114
E L ++ A +FCS Q A L++ + F+ + +CR +
Sbjct: 817 FDGPAREELQQVAA--QFCSYQSIALELIKTKQRKESRFQLFMQEAESHPQCRRLQ---- 870
Query: 115 LETETISPLLKLIS-PLLKEIV 135
L IS + +L PLL E +
Sbjct: 871 LRDLIISEMQRLTKYPLLLESI 892
>sp|Q008S8|ECT2L_HUMAN Epithelial cell-transforming sequence 2 oncogene-like OS=Homo
sapiens GN=ECT2L PE=2 SV=2
Length = 904
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 46/106 (43%), Gaps = 7/106 (6%)
Query: 5 LCRQVFEKPLKES-----KILTREEHGQIFVNWKEIIVCNHMFLRALRVRRDMSSKGDIR 59
+ R V+ PLK + IL+ IF + +I+ N FL LR R + G
Sbjct: 587 IVRDVYVAPLKAALSSNRAILSAANIQIIFCDILQILSLNRQFLDNLRDR--LQEWGPAH 644
Query: 60 MIGDILCEHLPRMTAYVRFCSCQLSAAALLQKLTDQSPEFKTISKK 105
+G+I+ + ++ Y F + ++K + P F+T K+
Sbjct: 645 CVGEIVTKFGSQLNTYTNFFNNYPVILKTIEKCREMIPAFRTFLKR 690
>sp|Q4IAS1|DBP4_GIBZE ATP-dependent RNA helicase DBP4 OS=Gibberella zeae (strain PH-1 /
ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=DBP4 PE=3
SV=1
Length = 793
Score = 30.8 bits (68), Expect = 2.8, Method: Composition-based stats.
Identities = 17/68 (25%), Positives = 33/68 (48%)
Query: 63 DILCEHLPRMTAYVRFCSCQLSAAALLQKLTDQSPEFKTISKKCRWISRIFLLETETISP 122
D L EHLPR + F + Q + L +L+ + PE+ ++ + + L + ++P
Sbjct: 219 DALIEHLPRERQTLMFSATQSKKVSDLARLSLKDPEYVSVHEAAVSATPTNLQQHYIVTP 278
Query: 123 LLKLISPL 130
L + + L
Sbjct: 279 LTEKLDTL 286
>sp|Q7RZ35|DBP4_NEUCR ATP-dependent RNA helicase dbp-4 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=dbp-4 PE=3 SV=1
Length = 823
Score = 30.0 bits (66), Expect = 4.4, Method: Composition-based stats.
Identities = 15/61 (24%), Positives = 31/61 (50%)
Query: 63 DILCEHLPRMTAYVRFCSCQLSAAALLQKLTDQSPEFKTISKKCRWISRIFLLETETISP 122
D L EHLP+ + F + Q + L +L+ + PE+ ++ + + + L + ++P
Sbjct: 225 DALVEHLPKSRQTLLFSATQSKRVSDLARLSLKDPEYVSVHEAAASATPVGLQQHYIVTP 284
Query: 123 L 123
L
Sbjct: 285 L 285
>sp|O88387|FGD4_RAT FYVE, RhoGEF and PH domain-containing protein 4 OS=Rattus
norvegicus GN=Fgd4 PE=1 SV=1
Length = 766
Score = 29.6 bits (65), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 28/45 (62%)
Query: 61 IGDILCEHLPRMTAYVRFCSCQLSAAALLQKLTDQSPEFKTISKK 105
IGDIL + P + Y + +A L++ +T++ P+FK+++++
Sbjct: 285 IGDILQKLAPFLKMYGEYVKGFDNAVELVKNMTERVPQFKSVTEE 329
>sp|Q61210|ARHG1_MOUSE Rho guanine nucleotide exchange factor 1 OS=Mus musculus GN=Arhgef1
PE=1 SV=2
Length = 920
Score = 29.6 bits (65), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 39/97 (40%), Gaps = 7/97 (7%)
Query: 9 VFEKPLKESKILTREEHGQIFVNWKEIIVCNHMFLRALRVRRDMSSKGDIRMIGDILCEH 68
+F +P+ + +E IF + E+I + +FL L RR S I IGD+L
Sbjct: 440 LFYQPMADGGFFPLDELQNIFPSLDELIEVHSLFLDRLMKRRQESGY-LIEEIGDVLLAR 498
Query: 69 LPRMTA------YVRFCSCQLSAAALLQKLTDQSPEF 99
RFCS Q A L+ + P F
Sbjct: 499 FDGAEGSWFQKISSRFCSRQSFALEQLKAKQRKEPRF 535
>sp|Q91ZT5|FGD4_MOUSE FYVE, RhoGEF and PH domain-containing protein 4 OS=Mus musculus
GN=Fgd4 PE=1 SV=1
Length = 766
Score = 29.3 bits (64), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 28/45 (62%)
Query: 61 IGDILCEHLPRMTAYVRFCSCQLSAAALLQKLTDQSPEFKTISKK 105
IGDIL + P + Y + +A L++ +T++ P+FK+++++
Sbjct: 285 IGDILQKLAPFLKMYGEYVKGFDNAVELVKTMTERVPQFKSVTEE 329
>sp|Q9ES67|ARHGB_RAT Rho guanine nucleotide exchange factor 11 OS=Rattus norvegicus
GN=Arhgef11 PE=1 SV=1
Length = 1527
Score = 29.3 bits (64), Expect = 8.0, Method: Composition-based stats.
Identities = 24/99 (24%), Positives = 48/99 (48%), Gaps = 10/99 (10%)
Query: 9 VFEKPLKESKILTREEHGQIFVNWKEIIVCNHMFLRALR-------VRRDMSSKGDIRMI 61
+F + +++ ++ REE ++F N E+I ++ + A++ + RD+S R
Sbjct: 767 IFYQRMRKENLMPREELARLFPNLPELIEIHNSWCEAMKKLREEGPIIRDISDPMLARFD 826
Query: 62 GDILCEHLPRMTAYVRFCSCQLSAAALLQKLTDQSPEFK 100
G E L ++ A +FCS Q A L++ + F+
Sbjct: 827 GPAR-EELQQVAA--QFCSYQSVALELIRTKQRKESRFQ 862
>sp|P52734|FGD1_MOUSE FYVE, RhoGEF and PH domain-containing protein 1 OS=Mus musculus
GN=Fgd1 PE=1 SV=2
Length = 960
Score = 28.9 bits (63), Expect = 8.8, Method: Composition-based stats.
Identities = 26/102 (25%), Positives = 41/102 (40%), Gaps = 2/102 (1%)
Query: 1 MKTILCRQVFEKPLKESKILTREEHGQIFVNWKEIIVCNHMFLRALRVRRDMSSKGDIRM 60
+ + C ++ E+ S HG IF N I + FL + + M
Sbjct: 394 LDQVFCARLLEEARNRSSFPADVVHG-IFSNICSIYCFHQQFLLP-ELEKRMEEWDRYPR 451
Query: 61 IGDILCEHLPRMTAYVRFCSCQLSAAALLQKLTDQSPEFKTI 102
IGDIL + P + Y + A L+ T++S +FK I
Sbjct: 452 IGDILQKLAPFLKMYGEYVKNFDRAVELVNTWTERSTQFKVI 493
>sp|Q5PQQ9|CEP70_RAT Centrosomal protein of 70 kDa OS=Rattus norvegicus GN=Cep70 PE=2
SV=1
Length = 598
Score = 28.9 bits (63), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 48/108 (44%), Gaps = 14/108 (12%)
Query: 33 KEIIVCNHMFLRALRVRRDMSSK-----GDIRMIGDILCEHLPRMT--AYVRFCSCQLSA 85
+E+I NH L++ ++ ++ D++ I D + + + + R C Q
Sbjct: 106 QELIETNHQLKSELQLEQNRAAHQEQRANDLQQIMDSVKSKIGELEDESLNRVCQEQ--- 162
Query: 86 AALLQKLTDQSPEFKTISKKCRWISRIFLLETETISPLLKLISPLLKE 133
++ D E+KT+ KC+ + + + ETI+ L K I KE
Sbjct: 163 ----NRIKDLQKEYKTLQMKCQHYKKKQMEQEETIASLQKEIRRFAKE 206
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.328 0.139 0.420
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,269,952
Number of Sequences: 539616
Number of extensions: 1438370
Number of successful extensions: 3954
Number of sequences better than 100.0: 44
Number of HSP's better than 100.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 28
Number of HSP's that attempted gapping in prelim test: 3927
Number of HSP's gapped (non-prelim): 46
length of query: 135
length of database: 191,569,459
effective HSP length: 100
effective length of query: 35
effective length of database: 137,607,859
effective search space: 4816275065
effective search space used: 4816275065
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 55 (25.8 bits)