Query psy7083
Match_columns 95
No_of_seqs 134 out of 1176
Neff 9.5
Searched_HMMs 46136
Date Fri Aug 16 17:41:15 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7083.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/7083hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF14604 SH3_9: Variant SH3 do 99.7 3.6E-16 7.8E-21 77.9 5.7 48 14-61 1-49 (49)
2 PF07653 SH3_2: Variant SH3 do 99.6 1.5E-14 3.2E-19 73.6 5.9 52 11-62 1-54 (55)
3 PF00018 SH3_1: SH3 domain; I 99.4 3.5E-13 7.6E-18 66.7 5.1 45 13-57 1-48 (48)
4 KOG2070|consensus 99.4 1.1E-13 2.4E-18 95.1 2.6 54 11-64 19-73 (661)
5 smart00326 SH3 Src homology 3 99.3 8.6E-12 1.9E-16 63.1 6.6 53 10-62 3-57 (58)
6 KOG2199|consensus 99.3 2.3E-13 5E-18 91.4 0.9 56 8-63 214-270 (462)
7 KOG1029|consensus 99.3 8.3E-13 1.8E-17 94.7 2.8 55 10-64 1054-1109(1118)
8 cd00174 SH3 Src homology 3 dom 99.3 1.3E-11 2.9E-16 61.6 5.7 50 12-61 2-53 (54)
9 KOG1118|consensus 99.2 3.6E-12 7.8E-17 83.4 2.6 55 10-64 307-362 (366)
10 KOG4225|consensus 99.2 1.8E-11 3.9E-16 83.2 4.9 55 11-65 232-287 (489)
11 KOG4226|consensus 99.2 3E-11 6.6E-16 78.3 5.3 54 11-64 109-163 (379)
12 KOG0162|consensus 99.2 2.3E-11 5E-16 87.2 3.8 53 10-62 1052-1105(1106)
13 KOG4348|consensus 99.1 2.2E-11 4.7E-16 83.2 1.3 59 9-67 100-159 (627)
14 KOG2996|consensus 99.1 1.1E-10 2.3E-15 82.2 3.7 54 11-64 807-863 (865)
15 KOG4226|consensus 99.1 1.3E-10 2.8E-15 75.4 3.1 54 11-64 193-250 (379)
16 KOG2856|consensus 99.1 3.2E-11 7E-16 80.7 0.3 54 10-63 415-471 (472)
17 KOG4348|consensus 99.0 2.9E-10 6.3E-15 77.8 3.3 55 10-64 262-319 (627)
18 KOG4225|consensus 98.9 1.3E-09 2.9E-14 74.3 3.6 52 11-62 434-488 (489)
19 KOG4792|consensus 98.8 7.2E-10 1.6E-14 70.3 0.7 56 9-64 124-181 (293)
20 KOG1029|consensus 98.8 2.7E-09 6E-14 77.1 2.7 55 10-64 694-751 (1118)
21 KOG2546|consensus 98.8 2E-09 4.4E-14 73.2 1.9 54 11-64 425-479 (483)
22 KOG1264|consensus 98.8 2.9E-09 6.2E-14 77.5 2.3 57 9-65 774-832 (1267)
23 KOG0515|consensus 98.7 5.8E-09 1.3E-13 73.0 1.3 54 11-64 685-742 (752)
24 KOG1843|consensus 98.6 1.9E-08 4.1E-13 68.3 2.2 56 7-62 414-472 (473)
25 KOG3655|consensus 98.6 1.3E-08 2.9E-13 70.0 0.7 56 8-63 426-483 (484)
26 KOG1702|consensus 98.5 1.8E-07 3.9E-12 58.7 4.1 57 6-62 204-263 (264)
27 KOG3601|consensus 98.4 1.9E-07 4.1E-12 58.7 2.7 55 9-63 163-218 (222)
28 KOG3875|consensus 98.4 5.7E-08 1.2E-12 64.1 -0.1 56 10-65 269-332 (362)
29 KOG4278|consensus 98.2 1.7E-06 3.7E-11 62.7 4.6 63 9-74 90-155 (1157)
30 KOG3523|consensus 98.2 6.8E-08 1.5E-12 68.4 -2.7 56 11-66 610-668 (695)
31 KOG4773|consensus 98.2 3.1E-07 6.7E-12 61.4 -0.5 65 11-75 177-244 (386)
32 KOG3632|consensus 98.1 3.9E-06 8.4E-11 62.6 4.3 60 6-65 1135-1204(1335)
33 KOG3775|consensus 98.0 2.4E-06 5.3E-11 57.9 1.2 59 11-69 264-325 (482)
34 KOG3557|consensus 98.0 1.7E-06 3.6E-11 61.9 0.2 56 10-65 501-557 (721)
35 KOG2222|consensus 97.8 2.1E-06 4.5E-11 60.2 -1.1 55 10-64 549-604 (848)
36 KOG4792|consensus 97.8 6.7E-05 1.5E-09 48.1 5.0 55 10-64 228-285 (293)
37 KOG2528|consensus 97.8 8.7E-06 1.9E-10 56.2 0.8 54 11-64 4-60 (490)
38 KOG4575|consensus 97.7 0.0001 2.2E-09 53.3 5.3 57 8-64 7-66 (874)
39 KOG0197|consensus 97.4 5.6E-05 1.2E-09 53.0 1.3 55 9-63 11-69 (468)
40 KOG1451|consensus 97.3 0.00022 4.7E-09 51.3 3.3 53 10-62 757-811 (812)
41 KOG0609|consensus 97.3 7.2E-05 1.6E-09 52.8 0.1 53 10-62 215-280 (542)
42 KOG3771|consensus 97.2 0.00023 4.9E-09 49.6 1.9 52 10-61 401-454 (460)
43 KOG3725|consensus 97.0 8.3E-05 1.8E-09 48.6 -1.1 53 10-62 318-373 (375)
44 KOG4429|consensus 96.9 0.00018 4E-09 47.7 -0.4 52 11-62 365-417 (421)
45 KOG3601|consensus 96.6 0.00025 5.5E-09 44.9 -1.3 50 12-61 3-54 (222)
46 PF14603 hSH3: Helically-exten 96.5 0.0063 1.4E-07 33.4 3.7 43 22-64 29-73 (89)
47 KOG0199|consensus 96.1 0.0086 1.9E-07 44.6 4.0 51 12-62 377-431 (1039)
48 KOG3565|consensus 95.9 0.0014 3E-08 47.9 -0.7 56 9-64 578-637 (640)
49 PF08239 SH3_3: Bacterial SH3 95.8 0.056 1.2E-06 26.6 5.2 35 27-61 18-55 (55)
50 KOG3632|consensus 95.3 0.0091 2E-07 45.6 1.4 54 11-64 1246-1308(1335)
51 PF06347 SH3_4: Bacterial SH3 95.0 0.14 2.9E-06 25.4 4.9 35 26-60 19-53 (55)
52 smart00287 SH3b Bacterial SH3 94.3 0.19 4.1E-06 25.3 4.6 35 26-60 25-61 (63)
53 PRK10884 SH3 domain-containing 94.2 0.1 2.2E-06 33.3 3.9 38 26-63 48-88 (206)
54 KOG3812|consensus 93.7 0.032 6.9E-07 38.2 1.1 46 12-57 61-117 (475)
55 KOG3705|consensus 92.3 0.17 3.8E-06 35.5 3.1 53 10-62 510-565 (580)
56 KOG2996|consensus 91.1 0.16 3.4E-06 37.3 2.0 41 24-64 625-669 (865)
57 KOG0040|consensus 91.0 0.0025 5.5E-08 50.3 -7.3 58 12-69 971-1029(2399)
58 PRK13914 invasion associated s 86.3 1.9 4E-05 31.1 4.6 36 27-62 104-141 (481)
59 COG3103 SH3 domain protein [Si 80.4 6.2 0.00013 25.3 4.8 36 27-62 49-87 (205)
60 PF12913 SH3_6: SH3 domain of 79.5 6.2 0.00013 19.8 4.4 32 26-57 21-54 (54)
61 smart00743 Agenet Tudor-like d 76.8 4.9 0.00011 20.0 3.0 22 27-48 2-24 (61)
62 KOG4384|consensus 67.7 3.5 7.6E-05 28.5 1.4 46 19-64 148-194 (361)
63 KOG3580|consensus 55.0 28 0.0006 26.4 4.1 51 10-60 505-565 (1027)
64 PRK13545 tagH teichoic acids e 31.3 1E+02 0.0022 23.0 4.0 36 30-65 374-416 (549)
65 KOG1314|consensus 31.0 37 0.0008 23.9 1.7 39 22-60 330-379 (414)
66 PF11302 DUF3104: Protein of u 30.3 91 0.002 16.7 2.8 23 26-48 4-33 (75)
67 PF05641 Agenet: Agenet domain 28.7 87 0.0019 16.0 2.6 21 28-48 1-25 (68)
68 PF03894 XFP: D-xylulose 5-pho 27.0 3.9 8.5E-05 25.6 -3.2 35 23-57 52-89 (179)
No 1
>PF14604 SH3_9: Variant SH3 domain; PDB: 2CRE_A 2E5K_A 2CT3_A 2DE0_X 2D8H_A 2DA9_A 2X3X_E 2X3W_D 2KRN_A 2ED0_A ....
Probab=99.66 E-value=3.6e-16 Score=77.86 Aligned_cols=48 Identities=46% Similarity=0.994 Sum_probs=43.6
Q ss_pred EeccCCCCCCCCceecCCCEEEEEec-cCCEEEEEeCCeEEEEcCCCeE
Q psy7083 14 AAYPYDSTEPGDLTFNQDEVIYVTKK-ENDWWTGTIGDRTGLFPSNYVV 61 (95)
Q Consensus 14 al~~~~~~~~~~l~~~~g~~i~v~~~-~~~w~~~~~~g~~G~~P~~~v~ 61 (95)
|+|+|.++.+++|+|.+|++|.++.. +++||.++++|+.|+||++||+
T Consensus 1 Al~~y~~~~~dELs~~~Gd~i~v~~~~~~~W~~g~~~g~~G~~P~~yV~ 49 (49)
T PF14604_consen 1 ALYDYEAQDPDELSFKKGDVITVLEKSDDGWWYGRNTGRTGLFPANYVE 49 (49)
T ss_dssp ESSCBCSSSTTB-EB-TTEEEEEEEESSTSEEEEEETTEEEEEEGGGEE
T ss_pred CCccCCCCCcCEeeEcCCCEEEEEEeCCCCEEEEEECCEEEEECHHhCC
Confidence 68999999999999999999999988 8999999999999999999985
No 2
>PF07653 SH3_2: Variant SH3 domain; InterPro: IPR011511 SH3 (src Homology-3) domains are small protein modules containing approximately 50 amino acid residues [, ]. They are found in a great variety of intracellular or membrane-associated proteins [, , ] for example, in a variety of proteins with enzymatic activity, in adaptor proteins that lack catalytic sequences and in cytoskeletal proteins, such as fodrin and yeast actin binding protein ABP-1. The SH3 domain has a characteristic fold which consists of five or six beta-strands arranged as two tightly packed anti-parallel beta sheets. The linker regions may contain short helices []. The surface of the SH3-domain bears a flat, hydrophobic ligand-binding pocket which consists of three shallow grooves defined by conservative aromatic residues in which the ligand adopts an extended left-handed helical arrangement. The ligand binds with low affinity but this may be enhanced by multiple interactions. The region bound by the SH3 domain is in all cases proline-rich and contains PXXP as a core-conserved binding motif. The function of the SH3 domain is not well understood but they may mediate many diverse processes such as increasing local concentration of proteins, altering their subcellular location and mediating the assembly of large multiprotein complexes []. This entry represents a variant of the SH3 domain.; PDB: 1I1J_B 1K0X_A 1HJD_A 2KEA_A 1KJW_A 1JXM_A 1JXO_B 2EBP_A 2DL3_A 2EYX_A ....
Probab=99.56 E-value=1.5e-14 Score=73.60 Aligned_cols=52 Identities=40% Similarity=0.898 Sum_probs=46.1
Q ss_pred EEEEeccCCCCCCCCceecCCCEEEEE-ec-cCCEEEEEeCCeEEEEcCCCeEE
Q psy7083 11 YYIAAYPYDSTEPGDLTFNQDEVIYVT-KK-ENDWWTGTIGDRTGLFPSNYVVP 62 (95)
Q Consensus 11 ~~~al~~~~~~~~~~l~~~~g~~i~v~-~~-~~~w~~~~~~g~~G~~P~~~v~~ 62 (95)
+++|++||.+..+++|+|.+||++.++ .. +.+||.++.+|+.|+||.+|+++
T Consensus 1 ~~~a~~d~~~~~~~~Ls~~~Gd~i~v~~~~~~~~ww~~~~~g~~G~~P~~~v~~ 54 (55)
T PF07653_consen 1 YYRAIFDYVAEDPDELSFKKGDVIEVLGEKDDDGWWLGENNGRRGWFPSSYVEE 54 (55)
T ss_dssp EEEESSSBESSSTTB-EB-TTEEEEEEEEECSTSEEEEEETTEEEEEEGGGEEE
T ss_pred CEEEeEEECCCCCCceEEecCCEEEEEEeecCCCEEEEEECCcEEEEcHHHEEE
Confidence 478999999999999999999999999 55 68999999999999999999976
No 3
>PF00018 SH3_1: SH3 domain; InterPro: IPR001452 SH3 (src Homology-3) domains are small protein modules containing approximately 50 amino acid residues [, ]. They are found in a great variety of intracellular or membrane-associated proteins [, , ] for example, in a variety of proteins with enzymatic activity, in adaptor proteins that lack catalytic sequences and in cytoskeletal proteins, such as fodrin and yeast actin binding protein ABP-1. The SH3 domain has a characteristic fold which consists of five or six beta-strands arranged as two tightly packed anti-parallel beta sheets. The linker regions may contain short helices []. The surface of the SH3-domain bears a flat, hydrophobic ligand-binding pocket which consists of three shallow grooves defined by conservative aromatic residues in which the ligand adopts an extended left-handed helical arrangement. The ligand binds with low affinity but this may be enhanced by multiple interactions. The region bound by the SH3 domain is in all cases proline-rich and contains PXXP as a core-conserved binding motif. The function of the SH3 domain is not well understood but they may mediate many diverse processes such as increasing local concentration of proteins, altering their subcellular location and mediating the assembly of large multiprotein complexes []. The crystal structure of the SH3 domain of the cytoskeletal protein spectrin, and the solution structures of SH3 domains of phospholipase C (PLC-y) and phosphatidylinositol 3-kinase p85 alpha-subunit, have been determined [, , ]. In spite of relatively limited sequence similarity, their overall structures are similar. The domains belong to the alpha+beta structural class, with 5 to 8 beta-strands forming 2 tightly-packed, anti-parallel beta-sheets arranged in a barrel-like structure, and intervening loops sometimes forming helices. Conserved aliphatic and aromatic residues form a hydrophobic core (A11, L23, A29, V34, W42, L52 and V59 in PLC-y []) and a hydrophobic pocket on the molecular surface (L12, F13, W53 and P55 in PLC-y). The conserved core is believed to stabilise the fold, while the pocket is thought to serve as a binding site for target proteins. Conserved carboxylic amino acids located in the loops, on the periphery of the pocket (D14 and E22), may be involved in protein-protein interactions via proline-rich regions. The N- and C-termini are packed in close proximity, indicating that they are independent structural modules.; GO: 0005515 protein binding; PDB: 1UHF_A 1W1F_A 1WA7_A 1SEM_A 1KFZ_A 2SEM_B 1K76_A 3SEM_B 1X2Q_A 2J06_B ....
Probab=99.44 E-value=3.5e-13 Score=66.70 Aligned_cols=45 Identities=31% Similarity=0.762 Sum_probs=40.5
Q ss_pred EEeccCCCCCCCCceecCCCEEEEEec-cCCEEEEEe--CCeEEEEcC
Q psy7083 13 IAAYPYDSTEPGDLTFNQDEVIYVTKK-ENDWWTGTI--GDRTGLFPS 57 (95)
Q Consensus 13 ~al~~~~~~~~~~l~~~~g~~i~v~~~-~~~w~~~~~--~g~~G~~P~ 57 (95)
+|+|+|.++.+++|+|.+||.+.|+.. +.+||.++. +++.|+||+
T Consensus 1 ~Alydf~~~~~~eLs~~~Gd~i~v~~~~~~~Ww~~~~~~~~~~G~vP~ 48 (48)
T PF00018_consen 1 RALYDFDAEDPDELSFKKGDIIEVLEKSDDGWWKVRNESTGKEGWVPS 48 (48)
T ss_dssp EESSCBETSSTTBSEB-TTEEEEEEEESSSSEEEEEETTTTEEEEEEG
T ss_pred CCCeeeCCCCCCEEeEECCCEEEEEEecCCCEEEEEECCCCcEEEeeC
Confidence 589999999999999999999999998 789999997 479999995
No 4
>KOG2070|consensus
Probab=99.40 E-value=1.1e-13 Score=95.15 Aligned_cols=54 Identities=39% Similarity=0.796 Sum_probs=51.4
Q ss_pred EEEEeccCCCCCCCCceecCCCEEEEEec-cCCEEEEEeCCeEEEEcCCCeEEcc
Q psy7083 11 YYIAAYPYDSTEPGDLTFNQDEVIYVTKK-ENDWWTGTIGDRTGLFPSNYVVPYE 64 (95)
Q Consensus 11 ~~~al~~~~~~~~~~l~~~~g~~i~v~~~-~~~w~~~~~~g~~G~~P~~~v~~~~ 64 (95)
.++|.|.|.+.+.++|+|.+||+|.|.+. +.|||.|..+|+.||||++||.++.
T Consensus 19 vvrAkf~F~gsNnDELsf~KgDvItVTq~eeGGWWEGTlng~TGWFPsnYV~eik 73 (661)
T KOG2070|consen 19 VVRAKFNFQGSNNDELSFSKGDVITVTQVEEGGWWEGTLNGRTGWFPSNYVREIK 73 (661)
T ss_pred EEEEEeecccCCCceeccccCCEEEEEEeccCcceeccccCccCccchHHHHHHh
Confidence 58899999999999999999999999998 8999999999999999999999875
No 5
>smart00326 SH3 Src homology 3 domains. Src homology 3 (SH3) domains bind to target proteins through sequences containing proline and hydrophobic amino acids. Pro-containing polypeptides may bind to SH3 domains in 2 different binding orientations.
Probab=99.34 E-value=8.6e-12 Score=63.06 Aligned_cols=53 Identities=40% Similarity=0.917 Sum_probs=48.6
Q ss_pred cEEEEeccCCCCCCCCceecCCCEEEEEec-cCCEEEEEeC-CeEEEEcCCCeEE
Q psy7083 10 EYYIAAYPYDSTEPGDLTFNQDEVIYVTKK-ENDWWTGTIG-DRTGLFPSNYVVP 62 (95)
Q Consensus 10 ~~~~al~~~~~~~~~~l~~~~g~~i~v~~~-~~~w~~~~~~-g~~G~~P~~~v~~ 62 (95)
..++++++|.+..+++|++.+||.+.++.. +.+||.+++. ++.|+||.+|+..
T Consensus 3 ~~~~a~~~~~~~~~~~l~~~~Gd~v~v~~~~~~~w~~~~~~~~~~G~vP~~~v~~ 57 (58)
T smart00326 3 PQVRALYDYTAQDPDELSFKKGDIITVLEKSDDGWWKGRLGRGKEGLFPSNYVEE 57 (58)
T ss_pred cEEEEeeeeCCCCCCCCCCCCCCEEEEEEcCCCCeEEEEeCCCCEEEEchHHEEE
Confidence 467899999999999999999999999998 8999999975 9999999999875
No 6
>KOG2199|consensus
Probab=99.34 E-value=2.3e-13 Score=91.40 Aligned_cols=56 Identities=30% Similarity=0.657 Sum_probs=51.6
Q ss_pred CccEEEEeccCCCCCCCCceecCCCEEEEEec-cCCEEEEEeCCeEEEEcCCCeEEc
Q psy7083 8 SQEYYIAAYPYDSTEPGDLTFNQDEVIYVTKK-ENDWWTGTIGDRTGLFPSNYVVPY 63 (95)
Q Consensus 8 ~~~~~~al~~~~~~~~~~l~~~~g~~i~v~~~-~~~w~~~~~~g~~G~~P~~~v~~~ 63 (95)
....++|||||++.+.+||+|++||+|.|++. +..||+|.+.+..|+||++||...
T Consensus 214 ~~rkVRALYDFeAaE~nELsFkaGdIItVLd~s~~~WWKG~~~~~~GlFPsnfVT~~ 270 (462)
T KOG2199|consen 214 VVRKVRALYDFEAAEDNELSFKAGDIITVLDDSDPNWWKGENHRGIGLFPSNFVTAD 270 (462)
T ss_pred cchhhhhhhcccccCCCccceecCcEEEEcccCCcchhccccCCcccccchhhhhhh
Confidence 34578999999999999999999999999998 899999999999999999999763
No 7
>KOG1029|consensus
Probab=99.32 E-value=8.3e-13 Score=94.72 Aligned_cols=55 Identities=38% Similarity=0.809 Sum_probs=51.1
Q ss_pred cEEEEeccCCCCCCCCceecCCCEEEEEec-cCCEEEEEeCCeEEEEcCCCeEEcc
Q psy7083 10 EYYIAAYPYDSTEPGDLTFNQDEVIYVTKK-ENDWWTGTIGDRTGLFPSNYVVPYE 64 (95)
Q Consensus 10 ~~~~al~~~~~~~~~~l~~~~g~~i~v~~~-~~~w~~~~~~g~~G~~P~~~v~~~~ 64 (95)
.++.++|||.++++++|+|.+|++|.|+.+ ++.||.|..+|..|+||++||....
T Consensus 1054 ~qviamYdY~AqndDELsF~kgdiI~VlnkdepeWW~Ge~ng~sGLFPSNYV~k~t 1109 (1118)
T KOG1029|consen 1054 CQVIAMYDYEAQNDDELSFKKGDIINVLNKDEPEWWSGERNGKSGLFPSNYVQKQT 1109 (1118)
T ss_pred ceeEEeeccccCCcccccccCCCEEEecCCCChhhhcccccCccccCccccccccc
Confidence 467899999999999999999999999999 7899999999999999999996654
No 8
>cd00174 SH3 Src homology 3 domains; SH3 domains bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs; they play a role in the regulation of enzymes by intramolecular interactions, changing the subcellular localization of signal pathway components and mediate multiprotein complex assemblies.
Probab=99.29 E-value=1.3e-11 Score=61.61 Aligned_cols=50 Identities=42% Similarity=0.939 Sum_probs=45.7
Q ss_pred EEEeccCCCCCCCCceecCCCEEEEEec-cCCEEEEEeCC-eEEEEcCCCeE
Q psy7083 12 YIAAYPYDSTEPGDLTFNQDEVIYVTKK-ENDWWTGTIGD-RTGLFPSNYVV 61 (95)
Q Consensus 12 ~~al~~~~~~~~~~l~~~~g~~i~v~~~-~~~w~~~~~~g-~~G~~P~~~v~ 61 (95)
++++++|.+..+++|++.+||.+.++.. +.+||.+++.+ +.|+||.+|++
T Consensus 2 ~~a~~~~~~~~~~~l~~~~Gd~v~v~~~~~~~w~~~~~~~~~~G~vP~~~v~ 53 (54)
T cd00174 2 VRALYDYDARDPDELSFKKGDIIEVLEKSDDGWWEGRLLGGKRGLFPSNYVE 53 (54)
T ss_pred EEEEEeeCCCCCCCCCCCCCCEEEEEEcCCCCeEEEEECCCCEEEEccccCc
Confidence 6789999999999999999999999998 79999999855 99999999875
No 9
>KOG1118|consensus
Probab=99.25 E-value=3.6e-12 Score=83.42 Aligned_cols=55 Identities=27% Similarity=0.669 Sum_probs=51.9
Q ss_pred cEEEEeccCCCCCCCCceecCCCEEEEEec-cCCEEEEEeCCeEEEEcCCCeEEcc
Q psy7083 10 EYYIAAYPYDSTEPGDLTFNQDEVIYVTKK-ENDWWTGTIGDRTGLFPSNYVVPYE 64 (95)
Q Consensus 10 ~~~~al~~~~~~~~~~l~~~~g~~i~v~~~-~~~w~~~~~~g~~G~~P~~~v~~~~ 64 (95)
..|+++|||++.+.++|.|+.||+|.+... +++||.|...|..|+||.+||..+.
T Consensus 307 p~cralYdFepenEgEL~fkeGDlI~l~~QIdenWyeG~~~g~sG~FPvnYv~vlv 362 (366)
T KOG1118|consen 307 PCCRALYDFEPENEGELDFKEGDLITLTNQIDENWYEGEKHGESGMFPVNYVEVLV 362 (366)
T ss_pred hhheeeeccCCCCCCccCcccCceeeehhhcCcchhhheecCccCccccceeEEec
Confidence 469999999999999999999999999998 9999999999999999999999865
No 10
>KOG4225|consensus
Probab=99.22 E-value=1.8e-11 Score=83.21 Aligned_cols=55 Identities=27% Similarity=0.740 Sum_probs=52.2
Q ss_pred EEEEeccCCCCCCCCceecCCCEEEEEec-cCCEEEEEeCCeEEEEcCCCeEEccC
Q psy7083 11 YYIAAYPYDSTEPGDLTFNQDEVIYVTKK-ENDWWTGTIGDRTGLFPSNYVVPYEA 65 (95)
Q Consensus 11 ~~~al~~~~~~~~~~l~~~~g~~i~v~~~-~~~w~~~~~~g~~G~~P~~~v~~~~~ 65 (95)
.++|+|+|.++...||.|.+||+|.|+.+ |..|..|..+|+.|+||++||+.+..
T Consensus 232 ~aralf~F~~qt~kEL~~~kGDIVyI~rkvD~nWyeGEhhGr~GifP~sYvE~~~~ 287 (489)
T KOG4225|consen 232 AARALFDFEAQTPKELPFNKGDIVYILRKVDQNWYEGEHHGRVGIFPASYVEILTP 287 (489)
T ss_pred hhhheeccccCCccccccCCCCEEEEEeeccCceeeeeecceecceechheeecCc
Confidence 37899999999999999999999999999 99999999999999999999999875
No 11
>KOG4226|consensus
Probab=99.21 E-value=3e-11 Score=78.30 Aligned_cols=54 Identities=26% Similarity=0.611 Sum_probs=50.0
Q ss_pred EEEEeccCCCCCCCCceecCCCEEEEEec-cCCEEEEEeCCeEEEEcCCCeEEcc
Q psy7083 11 YYIAAYPYDSTEPGDLTFNQDEVIYVTKK-ENDWWTGTIGDRTGLFPSNYVVPYE 64 (95)
Q Consensus 11 ~~~al~~~~~~~~~~l~~~~g~~i~v~~~-~~~w~~~~~~g~~G~~P~~~v~~~~ 64 (95)
.+.+.|.|.++..++|++.+|..+.|+++ .+|||+|..+|+.||||++|+.+..
T Consensus 109 ~AvVKf~Y~a~~eDELsLtKGtrv~vmEKssDGWWrG~~ng~VGWFPSNYv~E~~ 163 (379)
T KOG4226|consen 109 PAVVKFNYVAEREDELSLTKGTRVTVMEKSSDGWWRGSYNGQVGWFPSNYVTEEV 163 (379)
T ss_pred ceEEEEeeccccccccccccCcEEEEEEeccCcceecccCCeeccccccceehhc
Confidence 36778999999999999999999999999 8999999999999999999998754
No 12
>KOG0162|consensus
Probab=99.17 E-value=2.3e-11 Score=87.24 Aligned_cols=53 Identities=30% Similarity=0.776 Sum_probs=49.9
Q ss_pred cEEEEeccCCCCCCCCceecCCCEEEEEec-cCCEEEEEeCCeEEEEcCCCeEE
Q psy7083 10 EYYIAAYPYDSTEPGDLTFNQDEVIYVTKK-ENDWWTGTIGDRTGLFPSNYVVP 62 (95)
Q Consensus 10 ~~~~al~~~~~~~~~~l~~~~g~~i~v~~~-~~~w~~~~~~g~~G~~P~~~v~~ 62 (95)
..|.|+|+|.+++.+||+|++|++|.++.+ ..|||.|+.+|++||||.+||.+
T Consensus 1052 p~~~A~Y~y~gq~~dEls~~~~diIei~~edpSGWw~gk~~~keG~~P~~Yv~~ 1105 (1106)
T KOG0162|consen 1052 PVCEALYDYPGQDVDELSFKKGDIIEIMREDPSGWWLGKLNGKEGLFPGNYVTE 1105 (1106)
T ss_pred cceeeeccCCCCCcccccccCCCEEEEeccCCCcchhhccCCcccccccccccc
Confidence 469999999999999999999999999998 68999999999999999999965
No 13
>KOG4348|consensus
Probab=99.11 E-value=2.2e-11 Score=83.17 Aligned_cols=59 Identities=22% Similarity=0.655 Sum_probs=53.8
Q ss_pred ccEEEEeccCCCCCCCCceecCCCEEEEEec-cCCEEEEEeCCeEEEEcCCCeEEccCCc
Q psy7083 9 QEYYIAAYPYDSTEPGDLTFNQDEVIYVTKK-ENDWWTGTIGDRTGLFPSNYVVPYEAQV 67 (95)
Q Consensus 9 ~~~~~al~~~~~~~~~~l~~~~g~~i~v~~~-~~~w~~~~~~g~~G~~P~~~v~~~~~~~ 67 (95)
...|++.|.|.+++.++|.|+.||+|.++.. .+|||.|..+|..|+||+++|.++..++
T Consensus 100 ~r~c~v~f~Y~pqndDELelkVGDiIeli~eVEeGWw~G~Lngk~GmFPsNFVkel~~~s 159 (627)
T KOG4348|consen 100 ARICVVTFAYSPQNDDELELKVGDIIELISEVEEGWWKGKLNGKVGMFPSNFVKELPTPS 159 (627)
T ss_pred ceeEEEEEeecCCCCceeeeeeccHHHhhhHhhhhhhhceecCcccccchhhceecCCCC
Confidence 3479999999999999999999999999998 8999999999999999999999876443
No 14
>KOG2996|consensus
Probab=99.08 E-value=1.1e-10 Score=82.25 Aligned_cols=54 Identities=28% Similarity=0.701 Sum_probs=47.8
Q ss_pred EEEEeccCCCCCCCCceecCCCEEEEEec---cCCEEEEEeCCeEEEEcCCCeEEcc
Q psy7083 11 YYIAAYPYDSTEPGDLTFNQDEVIYVTKK---ENDWWTGTIGDRTGLFPSNYVVPYE 64 (95)
Q Consensus 11 ~~~al~~~~~~~~~~l~~~~g~~i~v~~~---~~~w~~~~~~g~~G~~P~~~v~~~~ 64 (95)
.++|-|||.+.+..+|+++.||++.+..+ +.|||+|+.+|+.||||++||++..
T Consensus 807 ~AvarYdf~ard~~eLSlk~GDvV~i~~k~g~d~GWWkGevngrvGwFPstYVee~~ 863 (865)
T KOG2996|consen 807 TAVARYDFCARDMRELSLKEGDVVKIYDKVGEDQGWWKGEVNGRVGWFPSTYVEEDD 863 (865)
T ss_pred eeeeccccCCCchhhcccccCCEEEEehhccccCceecceecCcccccccccccccC
Confidence 46677888888889999999999999886 5899999999999999999998643
No 15
>KOG4226|consensus
Probab=99.05 E-value=1.3e-10 Score=75.42 Aligned_cols=54 Identities=31% Similarity=0.699 Sum_probs=50.1
Q ss_pred EEEEeccCCCCCCCCceecCCCEEEEEec---cCCEEEEEe-CCeEEEEcCCCeEEcc
Q psy7083 11 YYIAAYPYDSTEPGDLTFNQDEVIYVTKK---ENDWWTGTI-GDRTGLFPSNYVVPYE 64 (95)
Q Consensus 11 ~~~al~~~~~~~~~~l~~~~g~~i~v~~~---~~~w~~~~~-~g~~G~~P~~~v~~~~ 64 (95)
.+.|||+|......+|+|++|+.+.|+.+ |++||.+++ .|+.|++|.+|+..+.
T Consensus 193 vVvaLYsFsssndeELsFeKGerleivd~Pe~DPdWwkarn~~G~vGLVPrNYv~vl~ 250 (379)
T KOG4226|consen 193 VVVALYSFSSSNDEELSFEKGERLEIVDKPENDPDWWKARNARGQVGLVPRNYVVVLS 250 (379)
T ss_pred EEEEEecccCCChhhcccccCceeEeccCCCCCchHHhhcccCCccceeecceEEEec
Confidence 47899999999999999999999999987 688999996 9999999999999875
No 16
>KOG2856|consensus
Probab=99.05 E-value=3.2e-11 Score=80.69 Aligned_cols=54 Identities=28% Similarity=0.570 Sum_probs=48.9
Q ss_pred cEEEEeccCCCCCCCCceecCCCEEEEEec-c-CCEEEEEe-CCeEEEEcCCCeEEc
Q psy7083 10 EYYIAAYPYDSTEPGDLTFNQDEVIYVTKK-E-NDWWTGTI-GDRTGLFPSNYVVPY 63 (95)
Q Consensus 10 ~~~~al~~~~~~~~~~l~~~~g~~i~v~~~-~-~~w~~~~~-~g~~G~~P~~~v~~~ 63 (95)
..++|||||.+++.++|+|+.|+.+..+.. | .||+.|+. .|+.|++|++||+.+
T Consensus 415 v~vraLYDY~gqE~DElsfkaGd~l~kl~eeDeqGWC~Grl~~G~vGLyPAnYVe~~ 471 (472)
T KOG2856|consen 415 VRVRALYDYAGQEGDELSFKAGDELEKLEEEDEQGWCKGRLDSGRVGLYPANYVECI 471 (472)
T ss_pred eeEEeeeccCcccccchhhccccHhhhcCCccccccccccccCCcccccchhhhhcc
Confidence 468999999999999999999999988877 4 89999997 599999999999764
No 17
>KOG4348|consensus
Probab=99.00 E-value=2.9e-10 Score=77.78 Aligned_cols=55 Identities=25% Similarity=0.755 Sum_probs=50.5
Q ss_pred cEEEEeccCCCCCCCCceecCCCEEEEEec---cCCEEEEEeCCeEEEEcCCCeEEcc
Q psy7083 10 EYYIAAYPYDSTEPGDLTFNQDEVIYVTKK---ENDWWTGTIGDRTGLFPSNYVVPYE 64 (95)
Q Consensus 10 ~~~~al~~~~~~~~~~l~~~~g~~i~v~~~---~~~w~~~~~~g~~G~~P~~~v~~~~ 64 (95)
.+|+++|.|++++.++|.++.||++.++.+ +-|||.|..+|+.|.||-+++..+.
T Consensus 262 eycrv~F~Ye~qndDELt~KEgdil~lItK~cgdaGWweGELnGk~GvFPDNFv~lv~ 319 (627)
T KOG4348|consen 262 EYCRVKFVYEPQNDDELTLKEGDILILITKNCGDAGWWEGELNGKKGVFPDNFVELVQ 319 (627)
T ss_pred hheeeeeeecCCCccceeeccccEEEEecccccccceeeeeecCccccCCchhhhhcC
Confidence 479999999999999999999999988776 5799999999999999999998765
No 18
>KOG4225|consensus
Probab=98.90 E-value=1.3e-09 Score=74.31 Aligned_cols=52 Identities=31% Similarity=0.673 Sum_probs=48.5
Q ss_pred EEEEeccCCCCCCCCceecCCCEEEEEec-cCCEEEE--EeCCeEEEEcCCCeEE
Q psy7083 11 YYIAAYPYDSTEPGDLTFNQDEVIYVTKK-ENDWWTG--TIGDRTGLFPSNYVVP 62 (95)
Q Consensus 11 ~~~al~~~~~~~~~~l~~~~g~~i~v~~~-~~~w~~~--~~~g~~G~~P~~~v~~ 62 (95)
.+.|+|.|.++..++|.|..||+|.|+++ |+||..| ++.|.-|.||.+||+.
T Consensus 434 ~yrAly~Y~pqnedeLEl~egDii~VmeKcddgWfvGts~rtg~fGtFPgnyV~~ 488 (489)
T KOG4225|consen 434 KYRALYSYRPQNEDELELREGDIIDVMEKCDDGWFVGTSRRTGKFGTFPGNYVKR 488 (489)
T ss_pred cceeccccCCCCchhheeccCCEEeeeecccCcceeccceecccccccCcccccc
Confidence 47999999999999999999999999999 9999999 5699999999999964
No 19
>KOG4792|consensus
Probab=98.84 E-value=7.2e-10 Score=70.26 Aligned_cols=56 Identities=29% Similarity=0.726 Sum_probs=50.5
Q ss_pred ccEEEEeccCCCCCCCCceecCCCEEEEEec-cCCEEEEEe-CCeEEEEcCCCeEEcc
Q psy7083 9 QEYYIAAYPYDSTEPGDLTFNQDEVIYVTKK-ENDWWTGTI-GDRTGLFPSNYVVPYE 64 (95)
Q Consensus 9 ~~~~~al~~~~~~~~~~l~~~~g~~i~v~~~-~~~w~~~~~-~g~~G~~P~~~v~~~~ 64 (95)
..++.++|||.+...++|.|++|+++.|+.+ ...||..++ .|+.|.+|.+||+...
T Consensus 124 ~~~vr~~fdF~G~deeDLPFkkGeiL~I~~K~eeqWW~Arns~Gk~GmIPvpYVe~~~ 181 (293)
T KOG4792|consen 124 AEYVRALFDFNGNDEEDLPFKKGEILRIRDKPEEQWWNARNSEGKRGMIPVPYVEKYR 181 (293)
T ss_pred hhheeeeeccCCCccccCCcccCcEEEEecCcHHHhhhhhccCCcccceechHHHhhh
Confidence 4567889999999999999999999999999 788999996 9999999999998653
No 20
>KOG1029|consensus
Probab=98.81 E-value=2.7e-09 Score=77.14 Aligned_cols=55 Identities=31% Similarity=0.696 Sum_probs=50.3
Q ss_pred cEEEEeccCCCCCCCCceecCCCEEEEEec---cCCEEEEEeCCeEEEEcCCCeEEcc
Q psy7083 10 EYYIAAYPYDSTEPGDLTFNQDEVIYVTKK---ENDWWTGTIGDRTGLFPSNYVVPYE 64 (95)
Q Consensus 10 ~~~~al~~~~~~~~~~l~~~~g~~i~v~~~---~~~w~~~~~~g~~G~~P~~~v~~~~ 64 (95)
.+|+|+|.|++.+.++++|..||+|.|-.. .+||.-|...|..||||.+||+.+.
T Consensus 694 vkyrAly~FeaRs~dEisf~pGDII~V~esq~aEPGWlaGel~gktGWFPenyvEki~ 751 (1118)
T KOG1029|consen 694 VKYRALYPFEARSHDEISFEPGDIIIVFESQAAEPGWLAGELRGKTGWFPENYVEKIP 751 (1118)
T ss_pred EEEeeecccccCCcccccccCCCEEEEehhccCCcccccceeccccCcCcHHHHhhcc
Confidence 478999999999999999999999988765 5899999999999999999999764
No 21
>KOG2546|consensus
Probab=98.80 E-value=2e-09 Score=73.22 Aligned_cols=54 Identities=37% Similarity=0.821 Sum_probs=50.3
Q ss_pred EEEEeccCCCCCCCCceecCCCEEEEEec-cCCEEEEEeCCeEEEEcCCCeEEcc
Q psy7083 11 YYIAAYPYDSTEPGDLTFNQDEVIYVTKK-ENDWWTGTIGDRTGLFPSNYVVPYE 64 (95)
Q Consensus 11 ~~~al~~~~~~~~~~l~~~~g~~i~v~~~-~~~w~~~~~~g~~G~~P~~~v~~~~ 64 (95)
.++++|||.+...++|+|..|-+|.++++ +++||.|..+|..|+||.+||+.+.
T Consensus 425 kVv~iydy~~~KddeLsf~E~ailyv~kknddgw~EgV~~~VTglFpgnyve~~~ 479 (483)
T KOG2546|consen 425 KVVAIYDYTADKDDELSFAEGAILYVLKKNDDGWYEGVQDGVTGLFPGNYVEPLK 479 (483)
T ss_pred HHHhhcccccccccccccccccEEEEEEecCCcchhheecCcceeccCccccccc
Confidence 47889999999999999999999999999 8999999999999999999998654
No 22
>KOG1264|consensus
Probab=98.78 E-value=2.9e-09 Score=77.53 Aligned_cols=57 Identities=33% Similarity=0.626 Sum_probs=50.8
Q ss_pred ccEEEEeccCCCCCCCCceecCCCEEEEEec-cCCEEEEEeCC-eEEEEcCCCeEEccC
Q psy7083 9 QEYYIAAYPYDSTEPGDLTFNQDEVIYVTKK-ENDWWTGTIGD-RTGLFPSNYVVPYEA 65 (95)
Q Consensus 9 ~~~~~al~~~~~~~~~~l~~~~g~~i~v~~~-~~~w~~~~~~g-~~G~~P~~~v~~~~~ 65 (95)
...++|+|+|.+..+++|+|.++-+|..+.+ ..+||+|..+| ..+|||++||+++..
T Consensus 774 ~vt~kAL~~Yka~r~DELSFpk~aiItnv~keeg~wWrGdYGg~iq~wfPsnyVeei~~ 832 (1267)
T KOG1264|consen 774 QVTVKALYDYKAKRSDELSFPKGAIITNVSKEEGGWWRGDYGGRIQQWFPSNYVEEIST 832 (1267)
T ss_pred chhhhhhhccccCCcccccccccceeEeeeccCCceeecccccceeeeccHHHhhhhcc
Confidence 3578999999999999999999999999988 67799999865 569999999998764
No 23
>KOG0515|consensus
Probab=98.68 E-value=5.8e-09 Score=73.04 Aligned_cols=54 Identities=22% Similarity=0.630 Sum_probs=48.8
Q ss_pred EEEEeccCCCCCCCCceecCCCEEEEEec-c---CCEEEEEeCCeEEEEcCCCeEEcc
Q psy7083 11 YYIAAYPYDSTEPGDLTFNQDEVIYVTKK-E---NDWWTGTIGDRTGLFPSNYVVPYE 64 (95)
Q Consensus 11 ~~~al~~~~~~~~~~l~~~~g~~i~v~~~-~---~~w~~~~~~g~~G~~P~~~v~~~~ 64 (95)
.+.|+|||+++..++|+|..||.+.|+++ + ..||+++++|++|++|.+|+..+.
T Consensus 685 ~vYAlwdYeaqf~DELsf~eGd~lTvirr~d~~eteWWwa~lng~eGyVPRnylgLyP 742 (752)
T KOG0515|consen 685 VVYALWDYEAQFEDELSFDEGDELTVIRRDDEVETEWWWARLNGEEGYVPRNYLGLYP 742 (752)
T ss_pred eeEEeecccccccccccccCCceeEEEecCCcchhhhhhHhhcCcccccchhhhhcCc
Confidence 57899999999999999999999999987 3 579999999999999999987653
No 24
>KOG1843|consensus
Probab=98.62 E-value=1.9e-08 Score=68.33 Aligned_cols=56 Identities=41% Similarity=0.873 Sum_probs=50.4
Q ss_pred CCccEEEEeccCCCCCCCCceecCCCEEEEEec-c--CCEEEEEeCCeEEEEcCCCeEE
Q psy7083 7 LSQEYYIAAYPYDSTEPGDLTFNQDEVIYVTKK-E--NDWWTGTIGDRTGLFPSNYVVP 62 (95)
Q Consensus 7 ~~~~~~~al~~~~~~~~~~l~~~~g~~i~v~~~-~--~~w~~~~~~g~~G~~P~~~v~~ 62 (95)
..++.+.++|+|.+..+.++.|++||+|.++.+ + ..||+++.++.+|+||++||+.
T Consensus 414 l~~n~a~a~ysfage~~GDl~f~kgDii~il~ks~s~~dwwtgr~~~~egifPanyv~~ 472 (473)
T KOG1843|consen 414 LEPNIATALYSFAGEQPGDLSFQKGDIITILKKSDSANDWWTGRGNGYEGIFPANYVSL 472 (473)
T ss_pred cCcceeeeeehhccCCCCCcccccCceEEEecCCcchhhHHHhhccccccccccceecc
Confidence 345679999999999999999999999998887 3 7899999999999999999963
No 25
>KOG3655|consensus
Probab=98.58 E-value=1.3e-08 Score=70.02 Aligned_cols=56 Identities=29% Similarity=0.666 Sum_probs=50.5
Q ss_pred CccEEEEeccCCCCCCCCceecCCCEEEEEec-cCCEEEEEe-CCeEEEEcCCCeEEc
Q psy7083 8 SQEYYIAAYPYDSTEPGDLTFNQDEVIYVTKK-ENDWWTGTI-GDRTGLFPSNYVVPY 63 (95)
Q Consensus 8 ~~~~~~al~~~~~~~~~~l~~~~g~~i~v~~~-~~~w~~~~~-~g~~G~~P~~~v~~~ 63 (95)
.+..+.|+|||++.++.+++|..++.|..+.. +.|||.|.. .|..|+||++||+.+
T Consensus 426 ~~q~A~A~~dyqAAddtEisf~p~d~it~Id~vdegww~g~~pdG~~glfPaNyV~li 483 (484)
T KOG3655|consen 426 EPQTARALYDYQAADDTEISFDPPDAITLIDQVDEGWWTGQGPDGEVGLFPANYVELI 483 (484)
T ss_pred cCCCccccccccccCCcccccCCccccccccccCCccccccCCCCCcCcccccccccC
Confidence 34568999999999999999999999998888 999999995 899999999999754
No 26
>KOG1702|consensus
Probab=98.50 E-value=1.8e-07 Score=58.68 Aligned_cols=57 Identities=25% Similarity=0.562 Sum_probs=49.5
Q ss_pred cCCccEEEEeccCCCCCCCCceecCCCEEEEEec-cCCEEEEEe--CCeEEEEcCCCeEE
Q psy7083 6 ELSQEYYIAAYPYDSTEPGDLTFNQDEVIYVTKK-ENDWWTGTI--GDRTGLFPSNYVVP 62 (95)
Q Consensus 6 ~~~~~~~~al~~~~~~~~~~l~~~~g~~i~v~~~-~~~w~~~~~--~g~~G~~P~~~v~~ 62 (95)
...+..+.|.|||.++..++++|.-||-|.-... ++||..|.. +|..|..|++|++.
T Consensus 204 ~~~gktyra~ydysaqdedevsF~dgd~ivnvq~iddGWmygtv~rtg~tGmlpaNyie~ 263 (264)
T KOG1702|consen 204 SCTGKTYRAFYDYSAQDEDEVSFVDGDYIVNVQSIDDGWMYGTVVRTGWTGMLPANYIEF 263 (264)
T ss_pred CCCCccchhhccCcccCcceeEEecCCeEEEEEeccCCceeeEEEeccccCCCchhheee
Confidence 3445678999999999999999999999876666 899988874 89999999999874
No 27
>KOG3601|consensus
Probab=98.41 E-value=1.9e-07 Score=58.67 Aligned_cols=55 Identities=35% Similarity=0.732 Sum_probs=49.8
Q ss_pred ccEEEEeccCCCCCCCCceecCCCEEEEEec-cCCEEEEEeCCeEEEEcCCCeEEc
Q psy7083 9 QEYYIAAYPYDSTEPGDLTFNQDEVIYVTKK-ENDWWTGTIGDRTGLFPSNYVVPY 63 (95)
Q Consensus 9 ~~~~~al~~~~~~~~~~l~~~~g~~i~v~~~-~~~w~~~~~~g~~G~~P~~~v~~~ 63 (95)
..+..++|||.++.+.++.+.+|+.+.++.. +..||.|+..|+.|+||++|+...
T Consensus 163 ~~yqQa~~df~~~pp~ql~f~~gq~~~v~~~ss~~ww~Gs~lg~agiFpagyv~p~ 218 (222)
T KOG3601|consen 163 NYYQQALYDFQPQPPGQLAFRRGQQIQVLDSSSPFWWFGSKLGRAGIFPAGYVAPS 218 (222)
T ss_pred chhhhhcCCCCCCCchhhccccCCcceeecCCCcchhhccccCceeeecCcccccc
Confidence 3467889999999999999999999999998 889999999999999999998643
No 28
>KOG3875|consensus
Probab=98.39 E-value=5.7e-08 Score=64.11 Aligned_cols=56 Identities=27% Similarity=0.526 Sum_probs=47.6
Q ss_pred cEEEEeccCCCCCCCCceecCCCEEEEEec-c-----CCEEEEEe--CCeEEEEcCCCeEEccC
Q psy7083 10 EYYIAAYPYDSTEPGDLTFNQDEVIYVTKK-E-----NDWWTGTI--GDRTGLFPSNYVVPYEA 65 (95)
Q Consensus 10 ~~~~al~~~~~~~~~~l~~~~g~~i~v~~~-~-----~~w~~~~~--~g~~G~~P~~~v~~~~~ 65 (95)
..++|+|||.+.++.|++|++||.+.|..+ + ..||..+. .+..|++|.+||+.+..
T Consensus 269 ~~arA~YdF~a~np~ElSlk~Gdml~ia~K~dq~~~~~~gW~lat~dg~~tG~iP~NYvkIi~r 332 (362)
T KOG3875|consen 269 EFARALYDFVARNPVELSLKKGDMLAIASKEDQQGVRCEGWLLATRDGGTTGLIPINYVKIIGR 332 (362)
T ss_pred HHHHHHhhhhcCCHHHhhhhcCchhhcccccccCCCCCcceeeeeccCCeeeeeehhhhhhhhc
Confidence 568999999999999999999999998775 2 45888774 66789999999998864
No 29
>KOG4278|consensus
Probab=98.24 E-value=1.7e-06 Score=62.66 Aligned_cols=63 Identities=19% Similarity=0.448 Sum_probs=51.6
Q ss_pred ccEEEEeccCCCCCCCCceecCCCEEEEEec--cCCEEEEEe-CCeEEEEcCCCeEEccCCccccccce
Q psy7083 9 QEYYIAAYPYDSTEPGDLTFNQDEVIYVTKK--ENDWWTGTI-GDRTGLFPSNYVVPYEAQVDQQADLI 74 (95)
Q Consensus 9 ~~~~~al~~~~~~~~~~l~~~~g~~i~v~~~--~~~w~~~~~-~g~~G~~P~~~v~~~~~~~~~~~~~~ 74 (95)
.+.++|||||.+..++.|++.+|+.+.|+.- +..|...+. +|+ ||+|++|+.++. +.+.++|-
T Consensus 90 pNLFVALYDFvasGdntLSitKGeklRvLGYN~NgEWcEartKNGq-GWVPSNyItPvN--SLeKhsWY 155 (1157)
T KOG4278|consen 90 PNLFVALYDFVASGDNTLSITKGEKLRVLGYNKNGEWCEARTKNGQ-GWVPSNYITPVN--SLEKHSWY 155 (1157)
T ss_pred CceeEeeeeeeccccceeeeecCceEEEeeecCCCcceeecccCCC-cccccccccccc--chhhcccc
Confidence 4578999999999999999999999999987 577999986 555 999999998763 33345553
No 30
>KOG3523|consensus
Probab=98.22 E-value=6.8e-08 Score=68.42 Aligned_cols=56 Identities=27% Similarity=0.528 Sum_probs=50.1
Q ss_pred EEEEeccCCCCCCCCceecCCCEEEEEec-cCCEEEEEe--CCeEEEEcCCCeEEccCC
Q psy7083 11 YYIAAYPYDSTEPGDLTFNQDEVIYVTKK-ENDWWTGTI--GDRTGLFPSNYVVPYEAQ 66 (95)
Q Consensus 11 ~~~al~~~~~~~~~~l~~~~g~~i~v~~~-~~~w~~~~~--~g~~G~~P~~~v~~~~~~ 66 (95)
++.++..|.+..+++|++..+|++.|+++ .+||..|.. +|..||||..|++++.++
T Consensus 610 Qv~~~~sy~a~q~Del~Le~~Dvv~v~~k~~DGWl~GeRl~Dge~GWFP~~~veeI~~~ 668 (695)
T KOG3523|consen 610 QVQCVHSYKAKQPDELTLELADVVNVLQKTPDGWLEGERLRDGERGWFPSSYVEEITNP 668 (695)
T ss_pred hhheeeccccCCCceeeeehhhhhhhhhcCCCccccccccccCccCcchHHHHHHhcCH
Confidence 46677889999999999999999999999 899999995 899999999999987643
No 31
>KOG4773|consensus
Probab=98.16 E-value=3.1e-07 Score=61.45 Aligned_cols=65 Identities=18% Similarity=0.445 Sum_probs=56.1
Q ss_pred EEEEeccCCCCCCCCceecCCCEEEEEec-cCCEEEEEeCCeEEEEcCCCeEEcc--CCcccccccee
Q psy7083 11 YYIAAYPYDSTEPGDLTFNQDEVIYVTKK-ENDWWTGTIGDRTGLFPSNYVVPYE--AQVDQQADLIR 75 (95)
Q Consensus 11 ~~~al~~~~~~~~~~l~~~~g~~i~v~~~-~~~w~~~~~~g~~G~~P~~~v~~~~--~~~~~~~~~~~ 75 (95)
...+++||.+....+|.+..|+++.++.+ +.+||.|+..+.+||+|.+++..+. ++.+...+|.+
T Consensus 177 ~~~a~~df~gns~~EL~l~agdV~~~~~r~ek~W~~gk~R~~~g~yp~sF~~~ld~fpeeD~~~nw~r 244 (386)
T KOG4773|consen 177 RAEASFDFPGNSKLELNLVAGDVEFLLSRDEKYWLLGKVRGLTGYYPDSFVKQLDDFPEEDAGTNWLR 244 (386)
T ss_pred HHHhhccCCCCccceeeeehhhHHHHHhhcccceeeeeeccccccccHHhhhhhccCccccCCCCccc
Confidence 46778999999999999999999998887 7899999999999999999998865 23456678876
No 32
>KOG3632|consensus
Probab=98.12 E-value=3.9e-06 Score=62.65 Aligned_cols=60 Identities=25% Similarity=0.569 Sum_probs=51.1
Q ss_pred cCCccEEEEeccCCCC--------CCCCceecCCCEEEEEec-c-CCEEEEEeCCeEEEEcCCCeEEccC
Q psy7083 6 ELSQEYYIAAYPYDST--------EPGDLTFNQDEVIYVTKK-E-NDWWTGTIGDRTGLFPSNYVVPYEA 65 (95)
Q Consensus 6 ~~~~~~~~al~~~~~~--------~~~~l~~~~g~~i~v~~~-~-~~w~~~~~~g~~G~~P~~~v~~~~~ 65 (95)
.++...++|+|||++- ...||.|++|++|.|+.. | +|++.|+.+|+.|++|+++|.++..
T Consensus 1135 ~lparifVAlfDYDpl~MSpNpDAaEeELpFregqIikV~GDkDadgFY~GE~ngr~GlIPcNmvae~~v 1204 (1335)
T KOG3632|consen 1135 ALPARIFVALFDYDPLQMSPNPDAAEEELPFREGQIIKVLGDKDADGFYMGELNGRRGLIPCNMVAEQPV 1204 (1335)
T ss_pred cCcceeeEeeeccCccccCCCCChhhhccccccCcEEEEeccccccceeecccccccccccccccccccC
Confidence 3455679999999863 346799999999999987 5 8999999999999999999998753
No 33
>KOG3775|consensus
Probab=97.99 E-value=2.4e-06 Score=57.90 Aligned_cols=59 Identities=17% Similarity=0.443 Sum_probs=51.1
Q ss_pred EEEEeccCCCCCCCCceecCCCEEEEEec-cCCEEEEEe--CCeEEEEcCCCeEEccCCccc
Q psy7083 11 YYIAAYPYDSTEPGDLTFNQDEVIYVTKK-ENDWWTGTI--GDRTGLFPSNYVVPYEAQVDQ 69 (95)
Q Consensus 11 ~~~al~~~~~~~~~~l~~~~g~~i~v~~~-~~~w~~~~~--~g~~G~~P~~~v~~~~~~~~~ 69 (95)
..++++.|.+..++||.+.+||.+.|... ++-|..|.+ .|+.|+||+.|+.++......
T Consensus 264 THR~~~rFvPRHpDELeLEIgDav~Ve~eadD~W~~G~NlRTG~~GIFPA~ya~evd~~eed 325 (482)
T KOG3775|consen 264 THRAVFRFVPRHPDELELEIGDAVLVEAEADDFWFEGFNLRTGERGIFPAFYAHEVDGPEED 325 (482)
T ss_pred hhhhhhhccCCCcceeeeecCCeeEeeecccchhhccccccccccccccceeEEecCCchhh
Confidence 46788899999999999999999999888 888999985 999999999999987644333
No 34
>KOG3557|consensus
Probab=97.97 E-value=1.7e-06 Score=61.93 Aligned_cols=56 Identities=23% Similarity=0.596 Sum_probs=50.5
Q ss_pred cEEEEeccCCCCCCCCceecCCCEEEEEeccCCEEEEEe-CCeEEEEcCCCeEEccC
Q psy7083 10 EYYIAAYPYDSTEPGDLTFNQDEVIYVTKKENDWWTGTI-GDRTGLFPSNYVVPYEA 65 (95)
Q Consensus 10 ~~~~al~~~~~~~~~~l~~~~g~~i~v~~~~~~w~~~~~-~g~~G~~P~~~v~~~~~ 65 (95)
.++..+|||.+.+..+|++.+||++.|+.....||.+++ .|+.|++|++.+..+..
T Consensus 501 k~~~~~Ydf~arNs~ELsV~k~E~LEvl~d~R~WW~~kn~~G~~GyvP~nIL~~~~~ 557 (721)
T KOG3557|consen 501 KWVLVLYDFQARNSSELSVKKGEVLEVLDDGRKWWKVKNGHGRAGYVPSNILAPLQP 557 (721)
T ss_pred eeeeeehhhhcccchhhhhhhhhhhhhhhccccceeccCccCCCCCcchhhhccCCC
Confidence 378889999999999999999999999988788999997 88999999999887653
No 35
>KOG2222|consensus
Probab=97.85 E-value=2.1e-06 Score=60.22 Aligned_cols=55 Identities=18% Similarity=0.500 Sum_probs=49.4
Q ss_pred cEEEEeccCCCCCCCCceecCCCEEEEEec-cCCEEEEEeCCeEEEEcCCCeEEcc
Q psy7083 10 EYYIAAYPYDSTEPGDLTFNQDEVIYVTKK-ENDWWTGTIGDRTGLFPSNYVVPYE 64 (95)
Q Consensus 10 ~~~~al~~~~~~~~~~l~~~~g~~i~v~~~-~~~w~~~~~~g~~G~~P~~~v~~~~ 64 (95)
..++|+.||...+.++|.|.++|++.++.. +.-.|.|+.+|-.||||+.+|+.+.
T Consensus 549 krakal~df~r~dddelgfrkndiitiisekdehcwvgelnglrgwfpakfvelld 604 (848)
T KOG2222|consen 549 KRAKALHDFAREDDDELGFRKNDIITIISEKDEHCWVGELNGLRGWFPAKFVELLD 604 (848)
T ss_pred HHHHHHhhhhhccccccccccccEEEEeecCCcceeeeccccccccchHHHHHHHH
Confidence 357789999999999999999999999988 8889999999999999999887654
No 36
>KOG4792|consensus
Probab=97.78 E-value=6.7e-05 Score=48.08 Aligned_cols=55 Identities=24% Similarity=0.350 Sum_probs=46.5
Q ss_pred cEEEEeccCCC--CCCCCceecCCCEEEEEec-cCCEEEEEeCCeEEEEcCCCeEEcc
Q psy7083 10 EYYIAAYPYDS--TEPGDLTFNQDEVIYVTKK-ENDWWTGTIGDRTGLFPSNYVVPYE 64 (95)
Q Consensus 10 ~~~~al~~~~~--~~~~~l~~~~g~~i~v~~~-~~~w~~~~~~g~~G~~P~~~v~~~~ 64 (95)
.+++++++-.+ -.+..|.+++|+++.|.+. ..|-|.|+++|+.|.||..||+...
T Consensus 228 a~Arv~q~RVPnAYDkTaL~levGdiVkVTk~ninGqwegElnGk~G~fPfThvrf~d 285 (293)
T KOG4792|consen 228 AYARVIQKRVPNAYDKTALALEVGDIVKVTKKNINGQWEGELNGKIGHFPFTHVRFTD 285 (293)
T ss_pred hheeeehhcCCCccChhhhhhhcCcEEEEEeeccCceeeeeecCccccccceeEEeec
Confidence 45677776554 4567799999999999998 7899999999999999999998765
No 37
>KOG2528|consensus
Probab=97.75 E-value=8.7e-06 Score=56.22 Aligned_cols=54 Identities=28% Similarity=0.497 Sum_probs=48.9
Q ss_pred EEEEeccCCCCCCCCceecCCCEEEEEec--cCCEEEEEe-CCeEEEEcCCCeEEcc
Q psy7083 11 YYIAAYPYDSTEPGDLTFNQDEVIYVTKK--ENDWWTGTI-GDRTGLFPSNYVVPYE 64 (95)
Q Consensus 11 ~~~al~~~~~~~~~~l~~~~g~~i~v~~~--~~~w~~~~~-~g~~G~~P~~~v~~~~ 64 (95)
..+++|||.....+++++..++++.+... ..|||.|.+ .|..|.||+.|++...
T Consensus 4 k~RamyDf~~E~~sElsi~~~evl~i~~e~~~~GwLeg~Nsrge~GlfPa~yVeV~~ 60 (490)
T KOG2528|consen 4 KARAMYDFQSEGHSELSIWEGEVLSITSEDVIEGWLEGSNSRGERGLFPASYVEVTR 60 (490)
T ss_pred chhhhcchhhcccccccccccceeeecCcccccccccCCCccCccCCCcccceeeec
Confidence 46889999999999999999999999887 489999997 8899999999999865
No 38
>KOG4575|consensus
Probab=97.69 E-value=0.0001 Score=53.26 Aligned_cols=57 Identities=32% Similarity=0.483 Sum_probs=46.9
Q ss_pred CccEEEEeccCCCCCCCCceecCCCEEEEEeccCCEEEEE-e--CCeEEEEcCCCeEEcc
Q psy7083 8 SQEYYIAAYPYDSTEPGDLTFNQDEVIYVTKKENDWWTGT-I--GDRTGLFPSNYVVPYE 64 (95)
Q Consensus 8 ~~~~~~al~~~~~~~~~~l~~~~g~~i~v~~~~~~w~~~~-~--~g~~G~~P~~~v~~~~ 64 (95)
.+..++|+|.+.++..++|.|..||++..+...+|||.+. . ....|+||+++|..++
T Consensus 7 ~p~~vrA~y~w~ge~eGdl~f~egDlie~trI~dgkwwi~lhrNk~~~g~fpsNFvhcLd 66 (874)
T KOG4575|consen 7 LPCMVRALYAWPGEREGDLKFTEGDLIEQTRIEDGKWWILLHRNKDEDGLFPSNFVHCLD 66 (874)
T ss_pred CCceEEeeccCCCCcccccceecccceeEEeeccceeeeeeeecccccccCcccceeecc
Confidence 4467899999999999999999999999988855555554 3 5667999999998765
No 39
>KOG0197|consensus
Probab=97.43 E-value=5.6e-05 Score=52.96 Aligned_cols=55 Identities=33% Similarity=0.706 Sum_probs=47.7
Q ss_pred ccEEEEeccCCCCCCCCceecCCCE-EEEEec-cCCEEEEEe--CCeEEEEcCCCeEEc
Q psy7083 9 QEYYIAAYPYDSTEPGDLTFNQDEV-IYVTKK-ENDWWTGTI--GDRTGLFPSNYVVPY 63 (95)
Q Consensus 9 ~~~~~al~~~~~~~~~~l~~~~g~~-i~v~~~-~~~w~~~~~--~g~~G~~P~~~v~~~ 63 (95)
...+.++|+|.+..+.+|+|.+|++ ..++.. +..||..+. .+..|++|.|||...
T Consensus 11 ~~~~valyd~~s~~~~dLsf~~Gd~~~~~~~~~~~~Ww~ar~~~~~~~g~ip~N~v~~~ 69 (468)
T KOG0197|consen 11 ETIVVALYDYASRTPEDLSFRKGDVVLILLETTNGDWWRARSLQLGQEGYIPSNYVARN 69 (468)
T ss_pred cceEEEeccccCCCccccccccCceEEEeeccCChhHHHHHHhhcCCCCcCcCceeecc
Confidence 4578999999999999999999999 666666 688999884 788899999999864
No 40
>KOG1451|consensus
Probab=97.34 E-value=0.00022 Score=51.27 Aligned_cols=53 Identities=30% Similarity=0.606 Sum_probs=45.6
Q ss_pred cEEEEeccCCCCCCCCceecCCCEEEEEe-c-cCCEEEEEeCCeEEEEcCCCeEE
Q psy7083 10 EYYIAAYPYDSTEPGDLTFNQDEVIYVTK-K-ENDWWTGTIGDRTGLFPSNYVVP 62 (95)
Q Consensus 10 ~~~~al~~~~~~~~~~l~~~~g~~i~v~~-~-~~~w~~~~~~g~~G~~P~~~v~~ 62 (95)
..+.+++...+..+.++++..|.++.-.. . .+||..|+.+|..|++|++||+.
T Consensus 757 rk~k~lyAc~a~h~selsf~~gt~f~nv~~S~e~Gwl~GtLnGktglip~nyve~ 811 (812)
T KOG1451|consen 757 RRVKTLYACTADHHSELSFEPGTIFTNVYESNEDGWLVGTLNGKTGLIPSNYVEP 811 (812)
T ss_pred ccccceeccCCCCcccccccCcceeeeecccCCCCceeeecCCCcccCcccccCc
Confidence 35677888888899999999999987555 4 68999999999999999999975
No 41
>KOG0609|consensus
Probab=97.25 E-value=7.2e-05 Score=52.85 Aligned_cols=53 Identities=23% Similarity=0.577 Sum_probs=43.0
Q ss_pred cEEEEeccCCCCCC-------CCceecCCCEEEEEec-cCCEEEEEeC-----CeEEEEcCCCeEE
Q psy7083 10 EYYIAAYPYDSTEP-------GDLTFNQDEVIYVTKK-ENDWWTGTIG-----DRTGLFPSNYVVP 62 (95)
Q Consensus 10 ~~~~al~~~~~~~~-------~~l~~~~g~~i~v~~~-~~~w~~~~~~-----g~~G~~P~~~v~~ 62 (95)
.+++|+|||++..+ ..+.|.+||++.|+.. |..||.++.. +..|.+|+....+
T Consensus 215 ~~vra~FdYdP~~D~~IPCkEagl~F~~GDILqIv~qdD~nWWQA~~~~~~~~~~AGLiPS~~~qe 280 (542)
T KOG0609|consen 215 VFVRALFDYDPKEDDLIPCKEAGLPFQRGDILQIVSQDDPNWWQARRVGDPFGGLAGLIPSKELQE 280 (542)
T ss_pred eeehhhcCcCcccCCcccchhcCCcccccceeeeccCCCcchhhhhcccCccccccccccCHHHHH
Confidence 57899999987654 4589999999999998 8899999863 4568999876654
No 42
>KOG3771|consensus
Probab=97.17 E-value=0.00023 Score=49.62 Aligned_cols=52 Identities=15% Similarity=0.086 Sum_probs=44.0
Q ss_pred cEEEEeccCCCCCCCCceecCCCEEEEEec--cCCEEEEEeCCeEEEEcCCCeE
Q psy7083 10 EYYIAAYPYDSTEPGDLTFNQDEVIYVTKK--ENDWWTGTIGDRTGLFPSNYVV 61 (95)
Q Consensus 10 ~~~~al~~~~~~~~~~l~~~~g~~i~v~~~--~~~w~~~~~~g~~G~~P~~~v~ 61 (95)
..+++++||.+...++|+|..|+.|.|+.. ...||.|+..|..+-++.+|+.
T Consensus 401 ~~v~a~~dy~a~~~deLsf~~gd~i~vi~s~~~~e~~eg~~mg~ke~~~~~~~~ 454 (460)
T KOG3771|consen 401 YKVKALHDYAAQDTDELSFEAGDVILVIPSDNPEEQDEGWLMGVKESDWNGLFP 454 (460)
T ss_pred cceeccccccccccccccccCCCEEEEecCCCccchhhHHHhhhccccccccee
Confidence 368999999999999999999999999887 4779999987777666666664
No 43
>KOG3725|consensus
Probab=97.05 E-value=8.3e-05 Score=48.56 Aligned_cols=53 Identities=28% Similarity=0.525 Sum_probs=47.0
Q ss_pred cEEEEeccCCCCCCCCceecCCCEEEEEec---cCCEEEEEeCCeEEEEcCCCeEE
Q psy7083 10 EYYIAAYPYDSTEPGDLTFNQDEVIYVTKK---ENDWWTGTIGDRTGLFPSNYVVP 62 (95)
Q Consensus 10 ~~~~al~~~~~~~~~~l~~~~g~~i~v~~~---~~~w~~~~~~g~~G~~P~~~v~~ 62 (95)
..++++|||++..+.++++-.+++|.|..- |.+|.-|+.+++.|-+|-.|++.
T Consensus 318 rkArVlyDYdAa~s~ElslladeiitVyslpGMD~dwlmgErGnkkGKvPvtYlEL 373 (375)
T KOG3725|consen 318 RKARVLYDYDAALSQELSLLADEIITVYSLPGMDADWLMGERGNKKGKVPVTYLEL 373 (375)
T ss_pred cceeeeecccccchhhhhhhhcceEEEEecCCCChHHhhhhhcCCCCCcchhHHHh
Confidence 468999999999999999999999987764 78899999999999999988754
No 44
>KOG4429|consensus
Probab=96.91 E-value=0.00018 Score=47.73 Aligned_cols=52 Identities=12% Similarity=0.068 Sum_probs=45.9
Q ss_pred EEEEeccCCCCCCCCceecCCCEEEEEec-cCCEEEEEeCCeEEEEcCCCeEE
Q psy7083 11 YYIAAYPYDSTEPGDLTFNQDEVIYVTKK-ENDWWTGTIGDRTGLFPSNYVVP 62 (95)
Q Consensus 11 ~~~al~~~~~~~~~~l~~~~g~~i~v~~~-~~~w~~~~~~g~~G~~P~~~v~~ 62 (95)
.|.++|+|.+...++|...+|++..+-.. ..|||.|+..|..|-||+.++++
T Consensus 365 lcdafYSfqarqddel~~e~gditif~Ekkeeg~~f~rl~gd~~hf~Aa~iEe 417 (421)
T KOG4429|consen 365 LCDAFYSFQARQDDELGGEIGDITIFDEKKEEGPTFCRLLGDFEHFHAAEIEE 417 (421)
T ss_pred HhhhhhccccccccccCCcccceeeecCcccCCCceeeeccccCCCcHHHHHH
Confidence 47889999999999999999999877666 79999999999999999888764
No 45
>KOG3601|consensus
Probab=96.62 E-value=0.00025 Score=44.86 Aligned_cols=50 Identities=14% Similarity=0.385 Sum_probs=43.7
Q ss_pred EEEeccCCCCCCCCceecCCCEEEEEec--cCCEEEEEeCCeEEEEcCCCeE
Q psy7083 12 YIAAYPYDSTEPGDLTFNQDEVIYVTKK--ENDWWTGTIGDRTGLFPSNYVV 61 (95)
Q Consensus 12 ~~al~~~~~~~~~~l~~~~g~~i~v~~~--~~~w~~~~~~g~~G~~P~~~v~ 61 (95)
+.++++|.+...+||+|.+|+.+.++.. +..|......|..|++|.++..
T Consensus 3 a~a~n~f~a~i~dELsFlkg~~lk~l~~~d~~nw~~ael~g~~g~~P~Nai~ 54 (222)
T KOG3601|consen 3 AVAKNDFLAGIRDELSFLKGDNLKILNMEDDINWYKAELDGPEGFIPKNAIR 54 (222)
T ss_pred hhhhhhhhhcCcccceeecCCceEecchHHhhhhhhHhhcCccccCcccccc
Confidence 4678899999999999999999998887 3568888899999999998874
No 46
>PF14603 hSH3: Helically-extended SH3 domain; PDB: 1RI9_A.
Probab=96.47 E-value=0.0063 Score=33.44 Aligned_cols=43 Identities=14% Similarity=0.207 Sum_probs=28.5
Q ss_pred CCCCceecCCCEEEEEec-cCCEEEEEe-CCeEEEEcCCCeEEcc
Q psy7083 22 EPGDLTFNQDEVIYVTKK-ENDWWTGTI-GDRTGLFPSNYVVPYE 64 (95)
Q Consensus 22 ~~~~l~~~~g~~i~v~~~-~~~w~~~~~-~g~~G~~P~~~v~~~~ 64 (95)
+.-+|.+.+|+.+.|++. +..-|.+++ .|+-|++|.+++...+
T Consensus 29 G~kDLpi~~GE~LeVI~~t~~~kvlCRN~~GKYGYV~~~~L~~~d 73 (89)
T PF14603_consen 29 GGKDLPIKPGEILEVIQFTDDNKVLCRNSEGKYGYVLRSHLLPLD 73 (89)
T ss_dssp -TTB----TT-B-EEEEESSSSEEEEEETTTEEEEEEGGGS----
T ss_pred CcccCCcCCCCEEEEEEeCCCCeEEEeCCCCceeEEEHHHccCCC
Confidence 456799999999999998 778888997 9999999998886543
No 47
>KOG0199|consensus
Probab=96.14 E-value=0.0086 Score=44.62 Aligned_cols=51 Identities=31% Similarity=0.533 Sum_probs=42.0
Q ss_pred EEEeccCCCCCCCCceecCCCEEEEEec--cCCEEEEEe--CCeEEEEcCCCeEE
Q psy7083 12 YIAAYPYDSTEPGDLTFNQDEVIYVTKK--ENDWWTGTI--GDRTGLFPSNYVVP 62 (95)
Q Consensus 12 ~~al~~~~~~~~~~l~~~~g~~i~v~~~--~~~w~~~~~--~g~~G~~P~~~v~~ 62 (95)
..+..+|+...++.|-+++||.|.|++. ...||.|.+ +++.|.||.+-|..
T Consensus 377 ~~a~~~~d~~ep~aLh~~kgD~IvVIegs~a~y~WfgQn~Rn~kvG~Fprsvvt~ 431 (1039)
T KOG0199|consen 377 AVARETYDSIEPGALHLTKGDEIVVIEGSGAGYDWFGQNKRNQKVGTFPRSVVTA 431 (1039)
T ss_pred ceeeeeccccCCCceeeccCCeEEEEecCCccceeeccccccceecccCcceeee
Confidence 4455567778899999999999999887 357999974 88899999988873
No 48
>KOG3565|consensus
Probab=95.95 E-value=0.0014 Score=47.92 Aligned_cols=56 Identities=20% Similarity=0.459 Sum_probs=48.9
Q ss_pred ccEEEEeccCCCCCCCCceecCCCEEEEEec--cCCEEEEE--eCCeEEEEcCCCeEEcc
Q psy7083 9 QEYYIAAYPYDSTEPGDLTFNQDEVIYVTKK--ENDWWTGT--IGDRTGLFPSNYVVPYE 64 (95)
Q Consensus 9 ~~~~~al~~~~~~~~~~l~~~~g~~i~v~~~--~~~w~~~~--~~g~~G~~P~~~v~~~~ 64 (95)
...+.++|.|+++.++.+.+..|+++.++.. .+||-+++ .++..|++|.+|+....
T Consensus 578 ~~~~~a~~~~~~~s~~~~si~~~~il~~ie~~~g~gwt~~r~~~~~~~g~~Ptsyl~~~~ 637 (640)
T KOG3565|consen 578 IRTSKALYAFEGQSEGTISIDPGEILQVIEEDKGDGWTRGRLEPNGEKGYVPTSYLDVTE 637 (640)
T ss_pred ccceecccCcCCCCCCccccCcchhHHHHhhcccCCCCCCCCCCCCcCCCCCcccccccc
Confidence 4478999999999999999999999998887 58899998 58899999999987543
No 49
>PF08239 SH3_3: Bacterial SH3 domain; InterPro: IPR013247 SH3 (src Homology-3) domains are small protein modules containing approximately 50 amino acid residues [, ]. They are found in a great variety of intracellular or membrane-associated proteins [, , ] for example, in a variety of proteins with enzymatic activity, in adaptor proteins that lack catalytic sequences and in cytoskeletal proteins, such as fodrin and yeast actin binding protein ABP-1. The SH3 domain has a characteristic fold which consists of five or six beta-strands arranged as two tightly packed anti-parallel beta sheets. The linker regions may contain short helices []. The surface of the SH3-domain bears a flat, hydrophobic ligand-binding pocket which consists of three shallow grooves defined by conservative aromatic residues in which the ligand adopts an extended left-handed helical arrangement. The ligand binds with low affinity but this may be enhanced by multiple interactions. The region bound by the SH3 domain is in all cases proline-rich and contains PXXP as a core-conserved binding motif. The function of the SH3 domain is not well understood but they may mediate many diverse processes such as increasing local concentration of proteins, altering their subcellular location and mediating the assembly of large multiprotein complexes []. A homologue of the SH3 domain has been found in a number of different bacterial proteins including glycyl-glycine endopeptidase, bacteriocin and some hypothetical proteins.; PDB: 3PVQ_B 3NPF_B 3H41_A 2KQ8_A 2KRS_A 2KYB_A 2KT8_A.
Probab=95.85 E-value=0.056 Score=26.64 Aligned_cols=35 Identities=20% Similarity=0.451 Sum_probs=28.0
Q ss_pred eecCCCEEEEEec-cCC-EEEEE-eCCeEEEEcCCCeE
Q psy7083 27 TFNQDEVIYVTKK-END-WWTGT-IGDRTGLFPSNYVV 61 (95)
Q Consensus 27 ~~~~g~~i~v~~~-~~~-w~~~~-~~g~~G~~P~~~v~ 61 (95)
.+..|+.+.++.. ..+ |.+.+ .++..||++..|++
T Consensus 18 ~l~~g~~v~v~~~~~~~~W~~V~~~~g~~GwV~~~~l~ 55 (55)
T PF08239_consen 18 QLPKGEKVTVLGESGDGNWYKVRTYDGKTGWVSSSYLS 55 (55)
T ss_dssp EEETTSEEEEEEEETT--EEEEEEETTEEEEEEGGCEE
T ss_pred EEeCCCEEEEEEEcCCcEEEEEECcCCcEEEEEccccC
Confidence 5788999999888 333 99995 59999999998874
No 50
>KOG3632|consensus
Probab=95.28 E-value=0.0091 Score=45.55 Aligned_cols=54 Identities=30% Similarity=0.588 Sum_probs=45.7
Q ss_pred EEEEeccCCCCC-------CCCceecCCCEEEEEec--cCCEEEEEeCCeEEEEcCCCeEEcc
Q psy7083 11 YYIAAYPYDSTE-------PGDLTFNQDEVIYVTKK--ENDWWTGTIGDRTGLFPSNYVVPYE 64 (95)
Q Consensus 11 ~~~al~~~~~~~-------~~~l~~~~g~~i~v~~~--~~~w~~~~~~g~~G~~P~~~v~~~~ 64 (95)
..++.+||.+++ ..+|.|..||+|.|... ++|+..|..+|+.|.+|+++++...
T Consensus 1246 ~mvaa~dydpqeSSpg~dgeAelafraGdIitVfg~mdddgfyyGelngqkglvpsnfle~p~ 1308 (1335)
T KOG3632|consen 1246 QMVAASDYDPQESSPGLDGEAELAFRAGDIITVFGKMDDDGFYYGELNGQKGLVPSNFLEAPN 1308 (1335)
T ss_pred hhhhhhcCCcccCCCCcccceeeccccCCeEEeeccccCCcccccccCCccCccccccccCCC
Confidence 467788988764 46799999999999987 5889999999999999999987653
No 51
>PF06347 SH3_4: Bacterial SH3 domain; InterPro: IPR010466 SH3 (src Homology-3) domains are small protein modules containing approximately 50 amino acid residues [, ]. They are found in a great variety of intracellular or membrane-associated proteins [, , ] for example, in a variety of proteins with enzymatic activity, in adaptor proteins that lack catalytic sequences and in cytoskeletal proteins, such as fodrin and yeast actin binding protein ABP-1. The SH3 domain has a characteristic fold which consists of five or six beta-strands arranged as two tightly packed anti-parallel beta sheets. The linker regions may contain short helices []. The surface of the SH3-domain bears a flat, hydrophobic ligand-binding pocket which consists of three shallow grooves defined by conservative aromatic residues in which the ligand adopts an extended left-handed helical arrangement. The ligand binds with low affinity but this may be enhanced by multiple interactions. The region bound by the SH3 domain is in all cases proline-rich and contains PXXP as a core-conserved binding motif. The function of the SH3 domain is not well understood but they may mediate many diverse processes such as increasing local concentration of proteins, altering their subcellular location and mediating the assembly of large multiprotein complexes []. This family consists of several hypothetical bacterial proteins of unknown function, but that contain an SH-3 region.
Probab=94.98 E-value=0.14 Score=25.41 Aligned_cols=35 Identities=14% Similarity=0.242 Sum_probs=29.0
Q ss_pred ceecCCCEEEEEeccCCEEEEEeCCeEEEEcCCCe
Q psy7083 26 LTFNQDEVIYVTKKENDWWTGTIGDRTGLFPSNYV 60 (95)
Q Consensus 26 l~~~~g~~i~v~~~~~~w~~~~~~g~~G~~P~~~v 60 (95)
..+..|..+.+.....+|.+.+.+|..||++...+
T Consensus 19 ~~l~~g~~v~v~~~~~~W~~V~~~g~~GWv~~~~l 53 (55)
T PF06347_consen 19 ARLEPGVPVRVIECRGGWCKVRADGRTGWVHKSLL 53 (55)
T ss_pred EEECCCCEEEEEEccCCeEEEEECCeEEeEEeeec
Confidence 46778888888866789999999999999987654
No 52
>smart00287 SH3b Bacterial SH3 domain homologues.
Probab=94.35 E-value=0.19 Score=25.28 Aligned_cols=35 Identities=23% Similarity=0.354 Sum_probs=27.8
Q ss_pred ceecCCCEEEEEeccC-CEEEEEe-CCeEEEEcCCCe
Q psy7083 26 LTFNQDEVIYVTKKEN-DWWTGTI-GDRTGLFPSNYV 60 (95)
Q Consensus 26 l~~~~g~~i~v~~~~~-~w~~~~~-~g~~G~~P~~~v 60 (95)
-.+..|+.+.++.... +|.+.+. .|..||++..++
T Consensus 25 ~~l~~g~~v~i~~~~~~~W~~v~~~~g~~Gwi~~~~~ 61 (63)
T smart00287 25 GTLKKGDKVKVLGVDGQDWAKITYGSGQRGYVPGYVV 61 (63)
T ss_pred EEecCCCEEEEEEccCCceEEEEcCCCCEEEEEeeee
Confidence 3577899999988744 8999997 599999976554
No 53
>PRK10884 SH3 domain-containing protein; Provisional
Probab=94.16 E-value=0.1 Score=33.29 Aligned_cols=38 Identities=16% Similarity=0.110 Sum_probs=31.4
Q ss_pred ceecCCCEEEEEec-c-CCEEEEEe-CCeEEEEcCCCeEEc
Q psy7083 26 LTFNQDEVIYVTKK-E-NDWWTGTI-GDRTGLFPSNYVVPY 63 (95)
Q Consensus 26 l~~~~g~~i~v~~~-~-~~w~~~~~-~g~~G~~P~~~v~~~ 63 (95)
-.+..|+.+.++.. + .+|.+.+. +|+.||++..|+...
T Consensus 48 ~~l~~G~~v~vl~~~~~~~w~~Vr~~~G~~GWV~~~~Ls~~ 88 (206)
T PRK10884 48 GTLNAGEEVTLLQVNANTNYAQIRDSKGRTAWIPLKQLSTT 88 (206)
T ss_pred EEEcCCCEEEEEEEcCCCCEEEEEeCCCCEEeEEHHHhcCC
Confidence 36789999999887 3 68999985 889999999988653
No 54
>KOG3812|consensus
Probab=93.68 E-value=0.032 Score=38.18 Aligned_cols=46 Identities=28% Similarity=0.713 Sum_probs=33.9
Q ss_pred EEEeccCCCCCCC-------CceecCCCEEEEEec-cCCEEEEEe---CCeEEEEcC
Q psy7083 12 YIAAYPYDSTEPG-------DLTFNQDEVIYVTKK-ENDWWTGTI---GDRTGLFPS 57 (95)
Q Consensus 12 ~~al~~~~~~~~~-------~l~~~~g~~i~v~~~-~~~w~~~~~---~g~~G~~P~ 57 (95)
+.+..+|.+.-.+ .++|...|.+.|-.+ +.+||.|+. .+.-||+|+
T Consensus 61 V~tnv~Y~gslde~~Pv~g~aisF~~kDFlHIkeKynnDWWIGRlVkeg~e~gFiPs 117 (475)
T KOG3812|consen 61 VRTNVSYDGSLDEDSPVQGHAISFEAKDFLHIKEKYNNDWWIGRLVKEGCEIGFIPS 117 (475)
T ss_pred EEeccccCCccCCCCCCCCceeeeccccceeehhhcccchhHHHHhhcCCccccccc
Confidence 3445677765433 468888888888888 899999994 445699996
No 55
>KOG3705|consensus
Probab=92.29 E-value=0.17 Score=35.49 Aligned_cols=53 Identities=19% Similarity=0.193 Sum_probs=42.0
Q ss_pred cEEEEeccCCCCCCCCceecCCCEEEEEec-cCCEEEEEe--CCeEEEEcCCCeEE
Q psy7083 10 EYYIAAYPYDSTEPGDLTFNQDEVIYVTKK-ENDWWTGTI--GDRTGLFPSNYVVP 62 (95)
Q Consensus 10 ~~~~al~~~~~~~~~~l~~~~g~~i~v~~~-~~~w~~~~~--~g~~G~~P~~~v~~ 62 (95)
....++++..+...+++.++.||.+.|... =+|.-+|.+ .++.|.||+--+++
T Consensus 510 Hn~ivi~aH~prt~~ei~l~vGD~vgvAGNHWdGySKG~Nr~t~~~GlfPSyKvre 565 (580)
T KOG3705|consen 510 HNVIVIEAHIPRTNKEIDLKVGDKVGVAGNHWDGYSKGTNRQTYKEGLFPSYKVRE 565 (580)
T ss_pred cceEEEEecCCCcccccCcccCCeeeecccccccccccccccccccCCCccceeee
Confidence 356788899999999999999999988875 245556664 77889999876664
No 56
>KOG2996|consensus
Probab=91.13 E-value=0.16 Score=37.26 Aligned_cols=41 Identities=32% Similarity=0.667 Sum_probs=33.2
Q ss_pred CCceecCCCEEEEEec--cCCEEEEEe--CCeEEEEcCCCeEEcc
Q psy7083 24 GDLTFNQDEVIYVTKK--ENDWWTGTI--GDRTGLFPSNYVVPYE 64 (95)
Q Consensus 24 ~~l~~~~g~~i~v~~~--~~~w~~~~~--~g~~G~~P~~~v~~~~ 64 (95)
..|.+..|+++.++.. ...||.|++ .+..|+||++-|.+..
T Consensus 625 P~l~~~~gdvlel~~~d~~s~~w~gr~~~sr~sg~fpss~vkp~~ 669 (865)
T KOG2996|consen 625 PRLVLQEGDVLELLKGDAESSWWEGRNHGSRESGNFPSSTVKPCP 669 (865)
T ss_pred CceEecCCceeehhcCCCCCcccccCCccCCccCCCCccccCcCC
Confidence 4578999999988776 477999996 5677999999888654
No 57
>KOG0040|consensus
Probab=90.99 E-value=0.0025 Score=50.32 Aligned_cols=58 Identities=26% Similarity=0.668 Sum_probs=49.5
Q ss_pred EEEeccCCCCCCCCceecCCCEEEEEec-cCCEEEEEeCCeEEEEcCCCeEEccCCccc
Q psy7083 12 YIAAYPYDSTEPGDLTFNQDEVIYVTKK-ENDWWTGTIGDRTGLFPSNYVVPYEAQVDQ 69 (95)
Q Consensus 12 ~~al~~~~~~~~~~l~~~~g~~i~v~~~-~~~w~~~~~~g~~G~~P~~~v~~~~~~~~~ 69 (95)
+.++|+|...++-+.+.++||++.++.. ...||.+++..+.|++|..|+..+.....+
T Consensus 971 v~alyd~q~kSprev~mKkgDvltll~s~nkdwwkve~~d~qg~vpa~yvk~~~~~~~~ 1029 (2399)
T KOG0040|consen 971 VLALYDYQEKSPREVTMKKGDVLTLLNSINKDWWKVEVNDRQGFVPAAYVKRLDPGSAS 1029 (2399)
T ss_pred HHHHHHHHhcCHHHHHHhhhhHHHHHhhcccccccchhhhhcCcchHHHHHHhccCCcc
Confidence 4678999999999999999999887776 788999999999999999999887644333
No 58
>PRK13914 invasion associated secreted endopeptidase; Provisional
Probab=86.32 E-value=1.9 Score=31.07 Aligned_cols=36 Identities=19% Similarity=0.404 Sum_probs=30.8
Q ss_pred eecCCCEEEEEec-cCCEEEEEe-CCeEEEEcCCCeEE
Q psy7083 27 TFNQDEVIYVTKK-ENDWWTGTI-GDRTGLFPSNYVVP 62 (95)
Q Consensus 27 ~~~~g~~i~v~~~-~~~w~~~~~-~g~~G~~P~~~v~~ 62 (95)
.+..|+.+.++.. +.+|++.+. +|+.||+-..|+..
T Consensus 104 sl~~G~~V~Vl~~~~ngW~kI~~~~GktGwV~~~YLs~ 141 (481)
T PRK13914 104 SIKGGTKVTVETTESNGWHKITYNDGKTGFVNGKYLTD 141 (481)
T ss_pred eecCCCEEEEeecccCCeEEEEcCCCCEEEEecccccC
Confidence 6789999999864 788999997 69999998888875
No 59
>COG3103 SH3 domain protein [Signal transduction mechanisms]
Probab=80.43 E-value=6.2 Score=25.29 Aligned_cols=36 Identities=17% Similarity=0.247 Sum_probs=29.8
Q ss_pred eecCCCEEEEEecc--CCEEEEEe-CCeEEEEcCCCeEE
Q psy7083 27 TFNQDEVIYVTKKE--NDWWTGTI-GDRTGLFPSNYVVP 62 (95)
Q Consensus 27 ~~~~g~~i~v~~~~--~~w~~~~~-~g~~G~~P~~~v~~ 62 (95)
+++.|+.+.|+..+ .+|...+. .|..||++...+..
T Consensus 49 ~i~~Ge~vtvl~~~~~~~~~qI~~~~g~t~wi~~~~lt~ 87 (205)
T COG3103 49 SIKAGEKVTVLGTDGNTGYYQIRDSSGRTGWILSKNLTS 87 (205)
T ss_pred EecCCcEEEEEEEcCcccEEEEEecCCceEEEechhhcc
Confidence 78899999999883 46988886 88999999877664
No 60
>PF12913 SH3_6: SH3 domain of the SH3b1 type; PDB: 3M1U_B.
Probab=79.50 E-value=6.2 Score=19.76 Aligned_cols=32 Identities=13% Similarity=0.227 Sum_probs=22.3
Q ss_pred ceecCCCEEEEEec--cCCEEEEEeCCeEEEEcC
Q psy7083 26 LTFNQDEVIYVTKK--ENDWWTGTIGDRTGLFPS 57 (95)
Q Consensus 26 l~~~~g~~i~v~~~--~~~w~~~~~~g~~G~~P~ 57 (95)
-.+..|+-+.|+.. |..|..++...-.||+++
T Consensus 21 s~l~~gtPv~i~H~S~D~~W~fV~t~~~~GWV~s 54 (54)
T PF12913_consen 21 SALHPGTPVYILHTSRDGAWAFVQTPFYSGWVKS 54 (54)
T ss_dssp EEE-TT-EEEEEEE-TTSSEEEEE-SS-EEEEEG
T ss_pred cccCCCCCEEEEEECCCCCEEEEecCCeeEeeeC
Confidence 35678889988887 677999998888899863
No 61
>smart00743 Agenet Tudor-like domain present in plant sequences. Domain in plant sequences with possible chromatin-associated functions.
Probab=76.83 E-value=4.9 Score=20.03 Aligned_cols=22 Identities=27% Similarity=0.806 Sum_probs=18.0
Q ss_pred eecCCCEEEEEec-cCCEEEEEe
Q psy7083 27 TFNQDEVIYVTKK-ENDWWTGTI 48 (95)
Q Consensus 27 ~~~~g~~i~v~~~-~~~w~~~~~ 48 (95)
.+++|+.+.+... +..||.+..
T Consensus 2 ~~~~G~~Ve~~~~~~~~W~~a~V 24 (61)
T smart00743 2 DFKKGDRVEVFSKEEDSWWEAVV 24 (61)
T ss_pred CcCCCCEEEEEECCCCEEEEEEE
Confidence 4688999988876 788999974
No 62
>KOG4384|consensus
Probab=67.66 E-value=3.5 Score=28.48 Aligned_cols=46 Identities=20% Similarity=0.402 Sum_probs=39.3
Q ss_pred CCCCCCCceecCCCEEEEEec-cCCEEEEEeCCeEEEEcCCCeEEcc
Q psy7083 19 DSTEPGDLTFNQDEVIYVTKK-ENDWWTGTIGDRTGLFPSNYVVPYE 64 (95)
Q Consensus 19 ~~~~~~~l~~~~g~~i~v~~~-~~~w~~~~~~g~~G~~P~~~v~~~~ 64 (95)
.+.+.+++.+.+|+++.++.. ..+-|.+-.+++.|-|+..|+..+.
T Consensus 148 ~p~~~d~lk~~~~~~i~~~~~~~~~~~~g~~~~kv~~f~~~~v~~~s 194 (361)
T KOG4384|consen 148 SPYDTDSLKIKKGDIIDIIEKPPMGTWLGLLNNKVGSFKFIYVDVIS 194 (361)
T ss_pred CcccccchhhcccchhhccccCccccccccccCcccccccceecccc
Confidence 456788899999999998888 6778888899999999999998765
No 63
>KOG3580|consensus
Probab=54.96 E-value=28 Score=26.43 Aligned_cols=51 Identities=22% Similarity=0.416 Sum_probs=37.3
Q ss_pred cEEEEeccCCCCCCCCceecCCCEEEEEec--c--CC-EEEEEe-----CCeEEEEcCCCe
Q psy7083 10 EYYIAAYPYDSTEPGDLTFNQDEVIYVTKK--E--ND-WWTGTI-----GDRTGLFPSNYV 60 (95)
Q Consensus 10 ~~~~al~~~~~~~~~~l~~~~g~~i~v~~~--~--~~-w~~~~~-----~g~~G~~P~~~v 60 (95)
.+.+.-|.++...+..|.|.+|+++.++.. + .| |.-.+. .-..|++|....
T Consensus 505 FyIRtHFE~Eke~P~gL~FtrGeVFrvvDTLy~GklG~WLAvRiG~dlrE~ErGiIPNksR 565 (1027)
T KOG3580|consen 505 FYIRTHFECEKETPQGLAFTRGEVFRVVDTLYDGKLGNWLAVRIGNDLRELERGIIPNKSR 565 (1027)
T ss_pred eEEeeeeeecCCCCccccccccceeeeeecccCCCCcceEEEeecccHHHHhcccCCCccH
Confidence 356777889999999999999999998875 2 34 555553 224688887543
No 64
>PRK13545 tagH teichoic acids export protein ATP-binding subunit; Provisional
Probab=31.28 E-value=1e+02 Score=23.01 Aligned_cols=36 Identities=11% Similarity=0.512 Sum_probs=27.5
Q ss_pred CCCEEEEEec------cCCEEEEEe-CCeEEEEcCCCeEEccC
Q psy7083 30 QDEVIYVTKK------ENDWWTGTI-GDRTGLFPSNYVVPYEA 65 (95)
Q Consensus 30 ~g~~i~v~~~------~~~w~~~~~-~g~~G~~P~~~v~~~~~ 65 (95)
=|+.+.|... +..|..... +|..||+...++.++..
T Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (549)
T PRK13545 374 FGDIFTISDSNKNEKKDVEWIQITLSNGEIGWISTKFIEPFKS 416 (549)
T ss_pred cCceEEEcccccccccCcceEEEEecCCccceeeeeeeeeccc
Confidence 4777766553 347988886 99999999999988653
No 65
>KOG1314|consensus
Probab=30.99 E-value=37 Score=23.89 Aligned_cols=39 Identities=23% Similarity=0.406 Sum_probs=28.3
Q ss_pred CCCCceecCCCEEEEEeccCCEEEEE-------eCC----eEEEEcCCCe
Q psy7083 22 EPGDLTFNQDEVIYVTKKENDWWTGT-------IGD----RTGLFPSNYV 60 (95)
Q Consensus 22 ~~~~l~~~~g~~i~v~~~~~~w~~~~-------~~g----~~G~~P~~~v 60 (95)
+...+++++||.+.+......|..|. +++ -.||||.++.
T Consensus 330 ddprisL~p~d~i~~tr~~~~wlyg~~~l~e~~~E~~~rkiRgwfP~~~a 379 (414)
T KOG1314|consen 330 DDPRISLPPGDGIKATRGFNHWLYGEEILSEMFNESRERKIRGWFPRNCA 379 (414)
T ss_pred CCcccccCCCcceeeeeeeecccchhhhhhHHHhhcchhhhccccccccc
Confidence 34558899999998777667788873 222 4699999883
No 66
>PF11302 DUF3104: Protein of unknown function (DUF3104); InterPro: IPR021453 This family of proteins with unknown function appears to be restricted to Cyanobacteria.
Probab=30.33 E-value=91 Score=16.75 Aligned_cols=23 Identities=26% Similarity=0.901 Sum_probs=14.9
Q ss_pred ceecCCCEEEEEec-------cCCEEEEEe
Q psy7083 26 LTFNQDEVIYVTKK-------ENDWWTGTI 48 (95)
Q Consensus 26 l~~~~g~~i~v~~~-------~~~w~~~~~ 48 (95)
|.++.|+.+.+... +..||-|..
T Consensus 4 L~Vk~Gd~ViV~~~~~~~~~~~~dWWmg~V 33 (75)
T PF11302_consen 4 LSVKPGDTVIVQDEQEVGQKQDKDWWMGQV 33 (75)
T ss_pred cccCCCCEEEEecCccccccCCCCcEEEEE
Confidence 45677777654432 368999874
No 67
>PF05641 Agenet: Agenet domain; InterPro: IPR008395 This domain is related to the TUDOR domain IPR008191 from INTERPRO []. The function of the agenet domain is unknown. This signature matches one of the two Agenet domains in the FMR proteins [].; GO: 0003723 RNA binding; PDB: 2BKD_N 3O8V_A 3KUF_A 3H8Z_A.
Probab=28.73 E-value=87 Score=15.96 Aligned_cols=21 Identities=19% Similarity=0.681 Sum_probs=11.8
Q ss_pred ecCCCEEEEEec-c---CCEEEEEe
Q psy7083 28 FNQDEVIYVTKK-E---NDWWTGTI 48 (95)
Q Consensus 28 ~~~g~~i~v~~~-~---~~w~~~~~ 48 (95)
|++|+.+.|... + ..|+.+..
T Consensus 1 F~~G~~VEV~s~e~g~~gaWf~a~V 25 (68)
T PF05641_consen 1 FKKGDEVEVSSDEDGFRGAWFPATV 25 (68)
T ss_dssp --TT-EEEEEE-SBTT--EEEEEEE
T ss_pred CCCCCEEEEEEcCCCCCcEEEEEEE
Confidence 578999998876 2 34777764
No 68
>PF03894 XFP: D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase; InterPro: IPR005593 Phosphoketolases (PK) are key enzymes of the pentose phosphate pathway of heterofermentative and facultative homofermentative lactic acid bacteria and of the D-fructose 6-phosphate shunt of bifidobacteria. PK activity has been sporadically reported in other microorganisms including eukaryotic yeasts. Xylulose-5-phosphate/fructose-6-phosphate phosphoketolase is a thiamine diphosphate (ThdP)-dependent enzyme found in bacteria such as Bifidobacterium sp [, ]. This enzyme has dual-specificity with the following catalytic activities: 4.1.2.9 from EC: xylose 5-P + Pi = acetyl-P + glyeraldehyde-3-P 4.1.2.22 from EC: fructose-6-P + Pi = acetyl-P + erythrose-4-P Phosphoketolases are distantly related to transketolases, e.g. IPR005475 from INTERPRO.; GO: 0016832 aldehyde-lyase activity, 0005975 carbohydrate metabolic process; PDB: 3AI7_B 3AHC_A 3AHJ_A 3AHG_A 3AHE_A 3AHI_A 3AHD_A 3AHF_A 3AHH_A.
Probab=27.01 E-value=3.9 Score=25.60 Aligned_cols=35 Identities=26% Similarity=0.420 Sum_probs=23.4
Q ss_pred CCCceecCCCEEEEEec--cCCEEEEE-eCCeEEEEcC
Q psy7083 23 PGDLTFNQDEVIYVTKK--ENDWWTGT-IGDRTGLFPS 57 (95)
Q Consensus 23 ~~~l~~~~g~~i~v~~~--~~~w~~~~-~~g~~G~~P~ 57 (95)
++...-..|.++.++.+ ..||..|- ..|+.|+|++
T Consensus 52 ~~~~~~~~G~V~e~LSEh~c~G~leGY~LtGrhglf~s 89 (179)
T PF03894_consen 52 DDEHLAPGGRVMEVLSEHQCQGWLEGYLLTGRHGLFAS 89 (179)
T ss_dssp T-TTEESS-SEEE-S-HHHHHHHHHHHHHTT-EEEEEE
T ss_pred chhhcccCCeeeeecCHHHHHHHHHHHHhcCCcccccc
Confidence 44566677999988887 47888887 4999999974
Done!