RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy7083
(95 letters)
>d1uhfa_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo
sapiens) [TaxId: 9606]}
Length = 69
Score = 77.5 bits (191), Expect = 2e-21
Identities = 36/56 (64%), Positives = 45/56 (80%)
Query: 10 EYYIAAYPYDSTEPGDLTFNQDEVIYVTKKENDWWTGTIGDRTGLFPSNYVVPYEA 65
E YIA YPY S EPGDLTF + E I VT+K+ +WWTG+IGDR+G+FPSNYV P ++
Sbjct: 9 EEYIALYPYSSVEPGDLTFTEGEEILVTQKDGEWWTGSIGDRSGIFPSNYVKPKDS 64
>d1sema_ b.34.2.1 (A:) Growth factor receptor-bound protein 2
(GRB2), N- and C-terminal domains {Caenorhabditis
elegans, SEM-5 [TaxId: 6239]}
Length = 58
Score = 67.4 bits (165), Expect = 2e-17
Identities = 21/54 (38%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 11 YYIAAYPYDSTEPGDLTFNQDEVIYVTKKEND-WWTGTIGDRTGLFPSNYVVPY 63
+ A + ++ E G+L F + +VI + K++ WW G + +R G+FPSNYV PY
Sbjct: 4 FVQALFDFNPQESGELAFKRGDVITLINKDDPNWWEGQLNNRRGIFPSNYVCPY 57
>d1ng2a2 b.34.2.1 (A:215-332) p47pox (neutrophil cytosolic factor
1) {Human (Homo sapiens) [TaxId: 9606]}
Length = 118
Score = 67.4 bits (164), Expect = 8e-17
Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Query: 8 SQEYYIAAYPYDSTEPGDLTFNQDEVIYVTKKEND-WWTGTIGDRTGLFPSNYVVPYEAQ 66
+ E Y+A Y + E +++ + E + V K D WW D TG FPS Y+
Sbjct: 13 AGEPYVAIKAYTAVEGDEVSLLEGEAVEVIHKLLDGWWVIRKDDVTGYFPSMYLQKSGQD 72
Query: 67 VDQQADLIR 75
V Q I+
Sbjct: 73 VSQAQRQIK 81
>d1ujya_ b.34.2.1 (A:) Rac/CDC42 GEF 6 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 76
Score = 66.0 bits (161), Expect = 1e-16
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 8 SQEYYIAAYPYDSTEPGDLTFNQDEVIYVTKK-ENDWWTGTIGDRTGLFPSNYVVPYEAQ 66
Q A + + T +L+ + ++IYVT+ E WW GT+ RTG FPSNYV ++
Sbjct: 9 HQLIVKARFNFKQTNEDELSVCKGDIIYVTRVEEGGWWEGTLNGRTGWFPSNYVREIKSS 68
>d1gcqa_ b.34.2.1 (A:) Growth factor receptor-bound protein 2
(GRB2), N- and C-terminal domains {Human (Homo sapiens)
[TaxId: 9606]}
Length = 56
Score = 65.5 bits (160), Expect = 1e-16
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 11 YYIAAYPYDSTEPGDLTFNQDEVIYVTKKEND-WWTGTIGDRTGLFPSNYVVP 62
Y A + +D E G+L F + + I+V + WW G +TG+FP NYV P
Sbjct: 3 YVQALFDFDPQEDGELGFRRGDFIHVMDNSDPNWWKGACHGQTGMFPRNYVTP 55
>d1j3ta_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo
sapiens) [TaxId: 9606]}
Length = 74
Score = 66.0 bits (161), Expect = 1e-16
Identities = 13/50 (26%), Positives = 26/50 (52%)
Query: 11 YYIAAYPYDSTEPGDLTFNQDEVIYVTKKENDWWTGTIGDRTGLFPSNYV 60
A + + + L F++ ++I V +++ +WW G + G FP +YV
Sbjct: 12 KAQALCSWTAKKDNHLNFSKHDIITVLEQQENWWFGEVHGGRGWFPKSYV 61
>d1u06a1 b.34.2.1 (A:7-61) alpha-Spectrin, SH3 domain {Chicken
(Gallus gallus) [TaxId: 9031]}
Length = 55
Score = 64.0 bits (156), Expect = 4e-16
Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Query: 10 EYYIAAYPYDSTEPGDLTFNQDEVIYVTKKEND-WWTGTIGDRTGLFPSNYV 60
E +A Y Y P ++T + +++ + N WW + DR G P+ YV
Sbjct: 1 ELVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYV 52
>d1uhca_ b.34.2.1 (A:) Hypothetical protein Baa76854.1 (KIAA1010)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 79
Score = 64.5 bits (157), Expect = 4e-16
Identities = 13/66 (19%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
Query: 5 QELSQEYYIAAYPYDSTEPGDLTFNQDEVIYVTKK-----ENDWWTGTIGDRTGLFPSNY 59
+ + Y A Y + + P +L+ + ++ + + + +WW + + G PSNY
Sbjct: 9 EAEGNQVYFAVYTFKARNPNELSVSANQKLKILEFKDVTGNTEWWLAEVNGKKGYVPSNY 68
Query: 60 VVPYEA 65
+ E+
Sbjct: 69 IRKTES 74
>d1k4us_ b.34.2.1 (S:) p67phox {Human (Homo sapiens) [TaxId:
9606]}
Length = 62
Score = 63.6 bits (155), Expect = 7e-16
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 10 EYYIAAYPYDSTEPGDLTFNQDEVIYVTKKEND-WWTGTIGDRTGLFPSNYVVP 62
A + Y++T+P DL F + ++I V K N+ W G + G+FP +V
Sbjct: 6 SQVEALFSYEATQPEDLEFQEGDIILVLSKVNEEWLEGESKGKVGIFPKVFVED 59
>d1ckaa_ b.34.2.1 (A:) C-Crk, N-terminal SH3 domain {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 57
Score = 62.8 bits (153), Expect = 1e-15
Identities = 14/56 (25%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Query: 10 EYYIAAYPYDSTEPGDLTFNQDEVIYVTKKEND-WWTGTIGD-RTGLFPSNYVVPY 63
EY A + ++ + DL F + +++ + K + WW + + G+ P YV Y
Sbjct: 2 EYVRALFDFNGNDEEDLPFKKGDILRIRDKPEEQWWNAEDSEGKRGMIPVPYVEKY 57
>d1utia_ b.34.2.1 (A:) Grb2-related adaptor protein 2 (Mona/Gads)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 57
Score = 62.4 bits (152), Expect = 1e-15
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 11 YYIAAYPYDSTEPGDLTFNQDEVIYVTKK-ENDWWTGTIGDRTGLFPSNYVVP 62
+ A Y +++ E +L F EV+ V WWTG + ++ GLFP+NYV P
Sbjct: 3 WARALYDFEALEEDELGFRSGEVVEVLDSSNPSWWTGRLHNKLGLFPANYVAP 55
>d1udla_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo
sapiens) [TaxId: 9606]}
Length = 98
Score = 63.4 bits (154), Expect = 2e-15
Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 8 SQEYYIAAYPYDSTEPGDLTFNQDEVIYVTKKEND-WWTGTIGDRTGLFPSNYV 60
IA Y Y + +L+F++ ++I V K++ WW G I TGLFPSNYV
Sbjct: 33 PVCQVIAMYDYAANNEDELSFSKGQLINVMNKDDPDWWQGEINGVTGLFPSNYV 86
Score = 27.6 bits (61), Expect = 0.13
Identities = 7/34 (20%), Positives = 15/34 (44%)
Query: 51 RTGLFPSNYVVPYEAQVDQQADLIRCTCQVYLIF 84
+ G FP+++V ++ CQV ++
Sbjct: 8 QKGWFPASHVKLLGPSSERATPAFHPVCQVIAMY 41
>d1opka1 b.34.2.1 (A:83-139) Abl tyrosine kinase, SH3 domain
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 57
Score = 62.5 bits (152), Expect = 2e-15
Identities = 12/54 (22%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Query: 11 YYIAAYPYDSTEPGDLTFNQDEVIYVTKKEN--DWWTGTIGDRTGLFPSNYVVP 62
++A Y + ++ L+ + E + V + +W + G PSNY+ P
Sbjct: 2 LFVALYDFVASGDNTLSITKGEKLRVLGYNHNGEWCEAQTKNGQGWVPSNYITP 55
>d1uffa_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo
sapiens) [TaxId: 9606]}
Length = 93
Score = 62.8 bits (152), Expect = 3e-15
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Query: 10 EYYIAAYPYDSTEPGDLTFNQDEVIYVTKKEND---WWTGTIGDRTGLFPSNYVVPYEAQ 66
Y A YP+++ +++FN ++I V +K W G+ G FP NYV +
Sbjct: 6 SGYRALYPFEARNHDEMSFNSGDIIQVDEKTVGEPGWLYGSFQGNFGWFPCNYVEKMPSS 65
Query: 67 VDQQA 71
+++A
Sbjct: 66 ENEKA 70
>d2iima1 b.34.2.1 (A:58-119) p56-lck tyrosine kinase, SH3 domain
{Human (Homo sapiens) [TaxId: 9606]}
Length = 62
Score = 61.4 bits (149), Expect = 4e-15
Identities = 15/58 (25%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Query: 7 LSQEYYIAAYPYDSTEPGDLTFNQDEVIYVTKKENDWW--TGTIGDRTGLFPSNYVVP 62
L IA + Y+ + GDL F + E + + ++ +WW + G P N+V
Sbjct: 4 LQDNLVIALHSYEPSHDGDLGFEKGEQLRILEQSGEWWKAQSLTTGQEGFIPFNFVAK 61
>d1ycsb2 b.34.2.1 (B:457-519) 53BP2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 63
Score = 61.3 bits (149), Expect = 5e-15
Identities = 11/61 (18%), Positives = 27/61 (44%), Gaps = 4/61 (6%)
Query: 7 LSQEYYIAAYPYDSTEPGDLTFNQDEVIYVTKKEND----WWTGTIGDRTGLFPSNYVVP 62
+++ A + Y+ +L + + + + +E++ WW + D+ G P N +
Sbjct: 2 MNKGVIYALWDYEPQNDDELPMKEGDCMTIIHREDEDEIEWWWARLNDKEGYVPRNLLGL 61
Query: 63 Y 63
Y
Sbjct: 62 Y 62
>d1awwa_ b.34.2.1 (A:) Bruton's tyrosine kinase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 67
Score = 61.3 bits (149), Expect = 7e-15
Identities = 15/57 (26%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
Query: 10 EYYIAAYPYDSTEPGDLTFNQDEVIYVTKKEN-DWWTGTIGD-RTGLFPSNYVVPYE 64
+ +A Y Y DL + + ++ ++ N WW + + G PSNYV E
Sbjct: 9 KKVVALYDYMPMNANDLQLRKGDEYFILEESNLPWWRARDKNGQEGYIPSNYVTEAE 65
>d1uj0a_ b.34.2.1 (A:) Signal transducing adaptor molecule Stam2
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 58
Score = 60.8 bits (148), Expect = 7e-15
Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 13 IAAYPYDSTEPGDLTFNQDEVIYVTKKEND-WWTGTIGDRTGLFPSNYV 60
A Y +++ E +LTF E+I V + WW G TGLFPSN+V
Sbjct: 6 RALYDFEAVEDNELTFKHGELITVLDDSDANWWQGENHRGTGLFPSNFV 54
>d1qcfa1 b.34.2.1 (A:80-145) Hemapoetic cell kinase Hck {Human
(Homo sapiens) [TaxId: 9606]}
Length = 65
Score = 61.0 bits (148), Expect = 8e-15
Identities = 15/58 (25%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Query: 9 QEYYIAAYPYDSTEPGDLTFNQDEVIYVTKKENDWWTG--TIGDRTGLFPSNYVVPYE 64
+ +A Y Y++ DL+F + + + V ++ +WW + G PSNYV +
Sbjct: 4 RIIVVALYDYEAIHHEDLSFQKGDQMVVLEESGEWWKARSLATRKEGYIPSNYVARVD 61
>d1gl5a_ b.34.2.1 (A:) tyrosine kinase tec {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 67
Score = 60.6 bits (147), Expect = 1e-14
Identities = 16/58 (27%), Positives = 25/58 (43%), Gaps = 2/58 (3%)
Query: 9 QEYYIAAYPYDSTEPGDLTFNQDEVIYVTKKEN-DWWTGTIGD-RTGLFPSNYVVPYE 64
E +A Y + +TE DL + + + +K + WW G PSNYV +
Sbjct: 2 SEIVVAMYDFQATEAHDLRLERGQEYIILEKNDLHWWRARDKYGSEGYIPSNYVTGKK 59
>d1efna_ b.34.2.1 (A:) Fyn proto-oncogene tyrosine kinase, SH3
domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 57
Score = 59.7 bits (145), Expect = 2e-14
Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 3/54 (5%)
Query: 12 YIAAYPYDSTEPGDLTFNQDEVIYVTKKENDWW---TGTIGDRTGLFPSNYVVP 62
++A Y Y++ DL+F++ E + W TG PSNYV P
Sbjct: 3 FVALYDYEAITEDDLSFHKGEKFQILNSSEGDWWEARSLTTGETGYIPSNYVAP 56
>d1fmka1 b.34.2.1 (A:82-145) c-src protein tyrosine kinase {Human
(Homo sapiens) [TaxId: 9606]}
Length = 64
Score = 59.8 bits (145), Expect = 2e-14
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
Query: 12 YIAAYPYDSTEPGDLTFNQDEVIYVTKKEND-WWTGTIGD--RTGLFPSNYVVPYE 64
++A Y Y+S DL+F + E + + WW +TG PSNYV P +
Sbjct: 5 FVALYDYESRTETDLSFKKGERLQIVNNTEGDWWLAHSLSTGQTGYIPSNYVAPSD 60
>d1gria1 b.34.2.1 (A:1-56) Growth factor receptor-bound protein 2
(GRB2), N- and C-terminal domains {Human (Homo sapiens)
[TaxId: 9606]}
Length = 56
Score = 59.3 bits (144), Expect = 3e-14
Identities = 14/50 (28%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Query: 13 IAAYPYDSTEPGDLTFNQDEVIYVTKKEND--WWTGTIGDRTGLFPSNYV 60
IA Y + +T +L+F + +++ V +E D W+ + + G P NY+
Sbjct: 4 IAKYDFKATADDELSFKRGDILKVLNEECDQNWYKAELNGKDGFIPKNYI 53
>d2hspa_ b.34.2.1 (A:) Phospholipase C, SH3 domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 71
Score = 59.4 bits (144), Expect = 4e-14
Identities = 18/66 (27%), Positives = 27/66 (40%), Gaps = 2/66 (3%)
Query: 9 QEYYIAAYPYDSTEPGDLTFNQDEVIYVTKKEND-WWTGTIGDRT-GLFPSNYVVPYEAQ 66
+ A + Y + +LTF + +I +K+ WW G G + FPSNYV
Sbjct: 6 KCAVKALFDYKAQREDELTFIKSAIIQNVEKQEGGWWRGDYGGKKQLWFPSNYVEEMVNP 65
Query: 67 VDQQAD 72
D
Sbjct: 66 EGIHRD 71
>d1oota_ b.34.2.1 (A:) Hypothetical protein YFR024c {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 58
Score = 59.0 bits (143), Expect = 4e-14
Identities = 22/53 (41%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
Query: 11 YYIAAYPYDSTEPGDLTFNQDEVIYVTKKEND---WWTGTIGDRTGLFPSNYV 60
+A Y + E GDL F + +VI + KK + WWTG + R G+FP+NYV
Sbjct: 3 KAVALYSFAGEESGDLPFRKGDVITILKKSDSQNDWWTGRVNGREGIFPANYV 55
>d1ue9a_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo
sapiens) [TaxId: 9606]}
Length = 80
Score = 59.2 bits (143), Expect = 5e-14
Identities = 15/70 (21%), Positives = 28/70 (40%), Gaps = 6/70 (8%)
Query: 8 SQEYYIAAYPYDSTEPGDLTFNQDEVIYVTKKEND-WWTGTIGDR-----TGLFPSNYVV 61
S E Y ++ L+ ++I + KK WW G + R G FP+++V
Sbjct: 6 SGEIAQVTSAYVASGSEQLSLAPGQLILILKKNTSGWWQGELQARGKKRQKGWFPASHVK 65
Query: 62 PYEAQVDQQA 71
++ +
Sbjct: 66 LLGPSSERAS 75
>d1gcqc_ b.34.2.1 (C:) Vav N-terminal SH3 domain {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 69
Score = 58.7 bits (142), Expect = 7e-14
Identities = 17/56 (30%), Positives = 23/56 (41%), Gaps = 4/56 (7%)
Query: 12 YIAAYPYDSTEPGDLTFNQDEVIYVTKKE--NDWWTGTIGD--RTGLFPSNYVVPY 63
Y P L N +++ +TK E ++WW G G FP N V PY
Sbjct: 13 YYGIPPPPGAFGPFLRLNPGDIVELTKAEAEHNWWEGRNTATNEVGWFPCNRVHPY 68
>d1k9aa1 b.34.2.1 (A:6-76) Carboxyl-terminal src kinase (csk)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 71
Score = 57.9 bits (140), Expect = 1e-13
Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 3/61 (4%)
Query: 8 SQEYYIAAYPYDSTEPGDLTFNQDEVIYVTKKEND--WWTGTIGD-RTGLFPSNYVVPYE 64
S IA Y + T DL F + +V+ + D W+ R G+ P+NYV E
Sbjct: 5 SGTECIAKYNFHGTAEQDLPFCKGDVLTIVAVTKDPNWYKAKNKVGREGIIPANYVQKRE 64
Query: 65 A 65
Sbjct: 65 G 65
>d1arka_ b.34.2.1 (A:) SH3 domain from nebulin {Human (Homo
sapiens) [TaxId: 9606]}
Length = 60
Score = 57.1 bits (138), Expect = 2e-13
Identities = 15/56 (26%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Query: 8 SQEYYIAAYPYDSTEPGDLTFNQDEVIYVTKKEND-WWTGTIGD--RTGLFPSNYV 60
+ + + A Y Y + + +++F + I + ++ W GT+ RTG+ P+NYV
Sbjct: 2 AGKIFRAMYDYMAADADEVSFKDGDAIINVQAIDEGWMYGTVQRTGRTGMLPANYV 57
>d1jo8a_ b.34.2.1 (A:) Actin binding protein ABP1 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 58
Score = 56.7 bits (137), Expect = 3e-13
Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Query: 11 YYIAAYPYDSTEPGDLTFNQDEVIYVTKKEND-WWTGTIGD--RTGLFPSNYV 60
+ A Y YD+ E +LTF +++ I + +D WW G + GLFPSNYV
Sbjct: 2 WATAEYDYDAAEDNELTFVENDKIINIEFVDDDWWLGELEKDGSKGLFPSNYV 54
>d1u5sa1 b.34.2.1 (A:1-71) Nck-2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 71
Score = 57.2 bits (138), Expect = 3e-13
Identities = 17/59 (28%), Positives = 24/59 (40%), Gaps = 4/59 (6%)
Query: 10 EYYIAAYPYDSTEPGDLTFNQDEVIYVTKKEND---WWTGTIGD-RTGLFPSNYVVPYE 64
YP+ S +L F + E + V +K + WW + GL P NYVV
Sbjct: 7 HVVQTLYPFSSVTEEELNFEKGETMEVIEKPENDPEWWKCKNARGQVGLVPKNYVVVLS 65
>d1ugva_ b.34.2.1 (A:) Olygophrenin-1 like protein (KIAA0621)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 72
Score = 56.8 bits (137), Expect = 3e-13
Identities = 15/53 (28%), Positives = 20/53 (37%), Gaps = 2/53 (3%)
Query: 10 EYYIAAYPYDSTEPGDLTFNQDEVIYVTKKEN--DWWTGTIGDRTGLFPSNYV 60
A Y + +L+F V W GT+ +TGL P NYV
Sbjct: 11 RKAKALYACKAEHDSELSFTAGTVFDNVHPSQEPGWLEGTLNGKTGLIPENYV 63
>d1wlpb1 b.34.2.1 (B:229-281) p47pox (neutrophil cytosolic factor
1) {Human (Homo sapiens) [TaxId: 9606]}
Length = 53
Score = 55.3 bits (133), Expect = 1e-12
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Query: 10 EYYIAAYPYDSTEPGDLTFNQDEVIYVTKKEND-WWTGTIGDRTGLFPSNYV 60
E Y+A Y + E +++ + E + V K D WW D TG FPS Y+
Sbjct: 1 EPYVAIKAYTAVEGDEVSLLEGEAVEVIHKLLDGWWVIRKDDVTGYFPSMYL 52
>d1i07a_ b.34.2.1 (A:) EPS8 SH3 domain {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 59
Score = 53.8 bits (129), Expect = 5e-12
Identities = 10/57 (17%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Query: 9 QEYYIAAYPYDSTEPGDLTFNQDEVIYVTKKENDWWTGTIGD-RTGLFPSNYVVPYE 64
++Y + Y + + +L+ +D+V+ + WW +G P+N +
Sbjct: 1 KKYAKSKYDFVARNSSELSVMKDDVLEILDDRRQWWKVRNASGDSGFVPNNILDIMR 57
>d1ng2a1 b.34.2.1 (A:157-214) p47pox (neutrophil cytosolic factor
1) {Human (Homo sapiens) [TaxId: 9606]}
Length = 58
Score = 52.2 bits (125), Expect = 2e-11
Identities = 12/56 (21%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 10 EYYIAAYPYDSTEPGDLTFNQDEVIYVTKKEND-WWTGTIGDRTGLFPSNYVVPYE 64
+ Y A Y+ T ++ + +V+ V +K WW + + G P++++ P +
Sbjct: 3 QTYRAIADYEKTSGSEMALSTGDVVEVVEKSESGWWFCQMKAKRGWIPASFLEPLD 58
>d2v1ra1 b.34.2.1 (A:10-76) Peroxisomal membrane protein Pex13p
{Baker's yeast (Saccharomyces cerevisiae) [TaxId:
4932]}
Length = 67
Score = 51.8 bits (124), Expect = 3e-11
Identities = 12/59 (20%), Positives = 25/59 (42%), Gaps = 8/59 (13%)
Query: 10 EYYIAAYPYDSTEP-GDLTFNQDEVIYVTKKEN------DWWTGTIGD-RTGLFPSNYV 60
E+ A Y + P ++ + +++ + K++ DWW + G P NY+
Sbjct: 6 EFARALYDFVPENPEMEVALKKGDLMAILSKKDPLGRDSDWWKVRTKNGNIGYIPYNYI 64
>d1spka_ b.34.2.1 (A:) BAI1-associated protein 2-like 1 (RIKEN
cDNA 1300006m19) {Mouse (Mus musculus) [TaxId: 10090]}
Length = 72
Score = 51.8 bits (124), Expect = 3e-11
Identities = 14/58 (24%), Positives = 23/58 (39%), Gaps = 5/58 (8%)
Query: 8 SQEYYIAAYPYDSTE-PGDLTFNQDEVIYVTKKEND--WWTGTIG--DRTGLFPSNYV 60
S + +P+ + L+F Q +V+ + E W G G FPS+Y
Sbjct: 6 SGQKVKTIFPHTAGNNKTLLSFAQGDVLTLLIPEEKDGWLYGEHDTTKARGWFPSSYT 63
>d1bb9a_ b.34.2.1 (A:) Amphiphysin 2 {Rat (Rattus norvegicus)
[TaxId: 10116]}
Length = 83
Score = 51.9 bits (124), Expect = 4e-11
Identities = 13/71 (18%), Positives = 23/71 (32%), Gaps = 16/71 (22%)
Query: 10 EYYIAAYPYDSTEPGDLTFNQDEVIYVTKKEN------DWWTGTIGD----------RTG 53
A + Y +T+ +L +V+ V +N W G G
Sbjct: 13 FKVQAQHDYTATDTDELQLKAGDVVLVIPFQNPEEQDEGWLMGVKESDWNQHKELEKCRG 72
Query: 54 LFPSNYVVPYE 64
+FP N+ +
Sbjct: 73 VFPENFTERVQ 83
>d1ug1a_ b.34.2.1 (A:) Hypothetical protein Baa76854.1 (KIAA1010)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 92
Score = 51.7 bits (123), Expect = 7e-11
Identities = 11/69 (15%), Positives = 30/69 (43%), Gaps = 5/69 (7%)
Query: 8 SQEYYIAAYPYDSTEPGDLTFNQDEVIYVTKKE-----NDWWTGTIGDRTGLFPSNYVVP 62
++ + A +++ + D++ + +++ V KK+ + W G G S+++ P
Sbjct: 16 PEKLFQAERNFNAAQDLDVSLLEGDLVGVIKKKDPMGSQNRWLIDNGVTKGFVYSSFLKP 75
Query: 63 YEAQVDQQA 71
Y +
Sbjct: 76 YNPRRSHSD 84
>d2rn8a1 b.34.2.1 (A:176-228) Bruton's tyrosine kinase {Mus
musculus [TaxId: 10090]}
Length = 53
Score = 48.4 bits (115), Expect = 5e-10
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Query: 13 IAAYPYDSTEPGDLTFNQDEVIY-VTKKENDWWTGTIGD-RTGLFPSNYVV 61
IA Y Y + +P +L DE Y + E WW + G PS+Y+V
Sbjct: 2 IALYDYQTNDPQELALRCDEEYYLLDSSEIHWWRVQDKNGHEGYAPSSYLV 52
>d1zuua1 b.34.2.1 (A:2-57) BZZ1 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 56
Score = 48.0 bits (114), Expect = 9e-10
Identities = 9/51 (17%), Positives = 18/51 (35%), Gaps = 4/51 (7%)
Query: 14 AAYPYDSTEPGDLTFNQDEVIYVTKKEND----WWTGTIGDRTGLFPSNYV 60
Y Y + ++T + I + ++ TGL P+ Y+
Sbjct: 4 VLYAYVQKDDDEITITPGDKISLVARDTGSGWTKINNDTTGETGLVPTTYI 54
>d1wfwa_ b.34.2.1 (A:) Kalirin-9a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 74
Score = 46.3 bits (109), Expect = 5e-09
Identities = 9/63 (14%), Positives = 21/63 (33%), Gaps = 7/63 (11%)
Query: 8 SQEYYIAAYPYDSTEPGDLTFNQDEVIYVTKK-ENDWW------TGTIGDRTGLFPSNYV 60
S Y + + ++ +Q EV+ V + + + G P + +
Sbjct: 6 SGSTMTVIKDYYALKENEICVSQGEVVQVLAVNQQNMCLVYQPASDHSPAAEGWVPGSIL 65
Query: 61 VPY 63
P+
Sbjct: 66 APF 68
>d1wiea_ b.34.2.1 (A:) RIM binding protein 2, RIMBP2 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 96
Score = 46.7 bits (110), Expect = 6e-09
Identities = 15/72 (20%), Positives = 30/72 (41%), Gaps = 9/72 (12%)
Query: 10 EYYIAAYPYDSTEP------GDLTFNQDEVIYVTKKEND--WWTGTIGD-RTGLFPSNYV 60
+A Y Y+ + +L + +YV ++ ++ G + D + GL PSN+V
Sbjct: 18 HLCVARYSYNPFDGPNENPEAELPLTAGKYLYVYGDMDEDGFYEGELLDGQRGLVPSNFV 77
Query: 61 VPYEAQVDQQAD 72
+ + A
Sbjct: 78 DFVQDNESRLAS 89
>d1phta_ b.34.2.1 (A:) Phosphatidylinositol 3-kinase (p85-alpha
subunit, pi3k), SH3 domain {Human (Homo sapiens)
[TaxId: 9606]}
Length = 83
Score = 45.9 bits (108), Expect = 9e-09
Identities = 15/67 (22%), Positives = 20/67 (29%), Gaps = 18/67 (26%)
Query: 12 YIAAYPYDSTEPGDLTFNQDEVIYVTKK----------------ENDWWTGTI--GDRTG 53
Y A Y Y D+ + +++ V K E W G G
Sbjct: 6 YRALYDYKKEREEDIDLHLGDILTVNKGSLVALGFSDGQEARPEEIGWLNGYNETTGERG 65
Query: 54 LFPSNYV 60
FP YV
Sbjct: 66 DFPGTYV 72
>d1t0ha_ b.34.2.1 (A:) SH3-like domain of the L-type calcium
channel {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
Length = 96
Score = 46.1 bits (109), Expect = 1e-08
Identities = 17/73 (23%), Positives = 29/73 (39%), Gaps = 12/73 (16%)
Query: 11 YYIAAYPYDSTEPGD-------LTFNQDEVIYVTKKEN-DWWTGTI---GDRTGLFPSNY 59
Y + + D ++F + ++V +K N DWW G + G G PS
Sbjct: 23 AVRTNVRYSAAQEDDVPVPGMAISFEAKDFLHVKEKFNNDWWIGRLVKEGCEIGFIPSPV 82
Query: 60 VVPY-EAQVDQQA 71
+ Q +Q+A
Sbjct: 83 KLENMRLQHEQRA 95
>d1kjwa1 b.34.2.1 (A:430-525) Psd-95 {Rat (Rattus norvegicus)
[TaxId: 10116]}
Length = 96
Score = 44.3 bits (104), Expect = 6e-08
Identities = 16/73 (21%), Positives = 25/73 (34%), Gaps = 12/73 (16%)
Query: 11 YYIAAYPYDSTE-----PGDLTFNQDEVIYVTKKEND-WWTGTIGD------RTGLFPSN 58
Y A + YD T+ L+F +V++V ++ WW G PS
Sbjct: 3 YIRALFDYDKTKDCGFLSQALSFRFGDVLHVIDAGDEEWWQARRVHSDSETDDIGFIPSK 62
Query: 59 YVVPYEAQVDQQA 71
V +A
Sbjct: 63 RRVERREWSRLKA 75
>d1i1ja_ b.34.2.1 (A:) Melanoma inhibitory activity protein {Human
(Homo sapiens) [TaxId: 9606]}
Length = 106
Score = 43.9 bits (103), Expect = 9e-08
Identities = 17/76 (22%), Positives = 31/76 (40%), Gaps = 12/76 (15%)
Query: 10 EYYIAAYPYDSTEPGDLTFNQDEVIYVTKKEN----DWWTGTIGD--------RTGLFPS 57
+A Y + + LT ++ +V+YV K +W G++ R G FPS
Sbjct: 22 SMAVALQDYMAPDCRFLTIHRGQVVYVFSKLKGRGRLFWGGSVQGDYYGDLAARLGYFPS 81
Query: 58 NYVVPYEAQVDQQADL 73
+ V + + D+
Sbjct: 82 SIVREDQTLKPGKVDV 97
>d1vyva1 b.34.2.1 (A:71-215) SH3-like domain of the L-type calcium
channel {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 145
Score = 39.7 bits (92), Expect = 6e-06
Identities = 12/68 (17%), Positives = 24/68 (35%), Gaps = 11/68 (16%)
Query: 14 AAYPYDSTEPG-------DLTFNQDEVIYVTKKEND-WWTGTI---GDRTGLFPSNYVVP 62
Y ++F+ + +++ +K N+ WW G + G G PS +
Sbjct: 28 TNVSYCGALDEDVPVPSSAVSFDAKDFLHIKEKYNNDWWIGRLVKEGCEIGFIPSPLRLE 87
Query: 63 YEAQVDQQ 70
+Q
Sbjct: 88 NIRIQQEQ 95
>d1ofda3 d.153.1.1 (A:1-430) Alpha subunit of glutamate synthase,
N-terminal domain {Synechocystis sp. [TaxId: 1143]}
Length = 430
Score = 25.8 bits (56), Expect = 0.80
Identities = 7/21 (33%), Positives = 10/21 (47%)
Query: 41 NDWWTGTIGDRTGLFPSNYVV 61
+ G DR GL P+ Y +
Sbjct: 336 DGKIVGAGLDRNGLRPARYCI 356
>d1ea0a3 d.153.1.1 (A:1-422) Alpha subunit of glutamate synthase,
N-terminal domain {Azospirillum brasilense [TaxId: 192]}
Length = 422
Score = 24.6 bits (53), Expect = 2.2
Identities = 7/21 (33%), Positives = 9/21 (42%)
Query: 41 NDWWTGTIGDRTGLFPSNYVV 61
+ W DR GL P Y +
Sbjct: 337 DGRWVVGGMDRNGLRPMRYTI 357
>d1qvwa_ c.23.16.2 (A:) Hypothetical protein Ydr533Cp {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 236
Score = 24.0 bits (51), Expect = 4.3
Identities = 5/22 (22%), Positives = 10/22 (45%)
Query: 44 WTGTIGDRTGLFPSNYVVPYEA 65
+ G +TG+F + P+
Sbjct: 15 VFYSDGMKTGVFVVEALHPFNT 36
>d1n7va_ b.126.1.1 (A:) Adsorption protein p2 {Bacteriophage prd1
[TaxId: 10658]}
Length = 555
Score = 23.1 bits (49), Expect = 7.3
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 29 NQDEVIYVTKKENDWWTGTIGD 50
N DE+I++ + W+ IGD
Sbjct: 486 NPDEIIFILRNGAGWYACEIGD 507
>d2hv2a1 d.106.1.4 (A:287-397) Hypothetical protein EF1021
{Enterococcus faecalis [TaxId: 1351]}
Length = 111
Score = 22.5 bits (48), Expect = 7.7
Identities = 4/16 (25%), Positives = 7/16 (43%)
Query: 13 IAAYPYDSTEPGDLTF 28
+ YP+ S E +
Sbjct: 6 LEKYPFQSGEKETYSL 21
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.321 0.137 0.422
Gapped
Lambda K H
0.267 0.0623 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 363,634
Number of extensions: 13747
Number of successful extensions: 133
Number of sequences better than 10.0: 1
Number of HSP's gapped: 78
Number of HSP's successfully gapped: 55
Length of query: 95
Length of database: 2,407,596
Length adjustment: 58
Effective length of query: 37
Effective length of database: 1,611,256
Effective search space: 59616472
Effective search space used: 59616472
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 47 (22.1 bits)