Query psy7084
Match_columns 326
No_of_seqs 186 out of 616
Neff 7.2
Searched_HMMs 46136
Date Fri Aug 16 17:42:16 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7084.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/7084hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1959|consensus 100.0 4.5E-66 9.7E-71 519.4 18.5 272 46-326 459-789 (996)
2 PLN02701 alpha-mannosidase 100.0 2.3E-51 5.1E-56 437.9 30.0 261 43-326 498-843 (1050)
3 KOG1958|consensus 100.0 2.9E-35 6.2E-40 298.3 14.7 238 68-326 644-948 (1129)
4 PF07748 Glyco_hydro_38C: Glyc 100.0 4.2E-30 9E-35 254.7 27.0 245 68-326 1-294 (457)
5 PRK09819 alpha-mannosidase; Pr 99.9 5.3E-20 1.1E-24 196.6 26.5 233 65-318 381-692 (875)
6 KOG4342|consensus 99.2 1.7E-10 3.7E-15 115.3 13.6 263 23-321 601-918 (1078)
7 COG0383 AMS1 Alpha-mannosidase 98.1 4.7E-05 1E-09 82.3 13.3 212 67-325 552-784 (943)
8 PF11432 DUF3197: Protein of u 73.8 0.67 1.5E-05 37.1 -1.1 27 1-27 1-27 (113)
9 PF02762 Cbl_N3: CBL proto-onc 17.8 1.2E+02 0.0026 23.1 2.4 30 184-214 23-56 (86)
10 PF06788 UPF0257: Uncharacteri 17.8 7.8E+02 0.017 22.7 9.4 33 185-217 33-68 (236)
No 1
>KOG1959|consensus
Probab=100.00 E-value=4.5e-66 Score=519.41 Aligned_cols=272 Identities=40% Similarity=0.678 Sum_probs=240.2
Q ss_pred cCcccccccccccccCCc-CCCeeEEEEEcCCCceEEEEEEEe----------------e-ee----------eccCCCC
Q psy7084 46 STVKTCLYLNISSCEPSE-TWDKFAINVYNALGRTVNRYVLQL----------------A-ER----------TSQNSSA 97 (326)
Q Consensus 46 ~~~~~c~~ln~s~C~~t~-~~~~~~vvVyNpL~~~r~~vV~v~----------------P-qi----------~~~~~~~ 97 (326)
.+|++|++||||+||.|+ .++.+.|+|||||+|+++++|||| | |+ ..+....
T Consensus 459 ~~f~~C~~lNiS~C~~t~~~~~~~~v~~YNpLa~~~t~~VRiPV~~~~~~V~D~~G~~v~Sqivp~~~~~~al~~~~~~~ 538 (996)
T KOG1959|consen 459 GEFQSCLLLNISECAFTKDGADNFIVTLYNPLAHTVTQYVRIPVKEENYRVTDEKGRTVPSQIVPVPWQVLALESRNNDT 538 (996)
T ss_pred ccchhhhhhccccCCCCcCCcCcEEEEEEcCCcceeeeEEEEeccCCCeEEECCCCCCcccceeccchhhhhhhccccCC
Confidence 489999999999999995 788999999999999999999999 1 22 2456778
Q ss_pred cEEEEEEEecCCCceEEEEEEeCCCCCC---------CCCCCCceeEeeceEEEEEcC-CCCEEEEEE--CCceeeeeEE
Q psy7084 98 KMELVFKATLPPMGYSSFFVSTGPGKTS---------EVSPSHDNFIGTSMFGLRLDK-DGLVSQLLK--NNHSLPMTQT 165 (326)
Q Consensus 98 ~~~L~F~a~vPpLG~~ty~v~~~~~~~~---------~~~~~~~~~IeN~~lkl~fd~-~G~L~sl~~--~~~~~~~~~~ 165 (326)
+++|+|.|.||||||++|+|++..+... ++.......|+|+++|+.||. +|+|+++.. +|.+.++.|+
T Consensus 539 ~~eLvf~asvpplg~aty~i~k~~~~~~~~~~~~~~i~~~~~n~~~V~n~~~kl~fd~~tG~l~~v~~n~t~~t~~V~Q~ 618 (996)
T KOG1959|consen 539 KHELVFKASVPPLGIATYFIKKVASTERGSASHVRNIKKRESNATEVGNSHLKLVFDNDTGLLKTVEMNQTGVTENVDQE 618 (996)
T ss_pred CceEEEEEEecCccceEEEEeecCcccccccccccccccccCcceEeccceEEEEEcCCCCceEEEEecccCcceeeeee
Confidence 9999999999999999999996544322 112333488999999999998 899999887 5999999999
Q ss_pred EEEEeccccCCCCCCCCCCCCceeEecCCCCceEee-ccc----c-cCccEEEEEEEecCcEEE--EEEecCCCCeEEE-
Q psy7084 166 FGYYVGHESDYGNNDNGEMSSGAYIFKPEVNKSVVS-KSE----V-NDSTVEDVVRLLSNGEVT--TTVYKGPGKTSEV- 236 (326)
Q Consensus 166 f~~Y~~~~~~~Gd~~~~~~~sGAYiF~P~~~~~~~~-~~~----v-~Gpl~~ev~~~~~~~~~s--vrLy~~~~~~vEV- 236 (326)
|.+|.+.. |++ +.|.||||+|||.. .+.++ +.. | .|+|+.||||.+ ++|++ +|||+|.+ ++|+
T Consensus 619 f~~Y~~~~---g~n--~~q~SgAYiFRp~~-~~~~~~~~~vel~vv~G~LV~EVhQ~f-~~wiSQviRvy~g~~-~~E~E 690 (996)
T KOG1959|consen 619 FGYYKGYR---GDN--DKQASGAYIFRPGQ-ADIPIVSDQVELTVVDGPLVKEVHQQF-NPWISQVIRVYEGKN-HVEFE 690 (996)
T ss_pred eEEEEeec---CCc--CCccCcceEecCCC-CCccccccceEEEEecCchHHHHHHHH-HHHHhheeEecCCCc-ceEEE
Confidence 99999886 776 35999999999943 33343 322 3 999999999999 99999 99999999 8884
Q ss_pred -----EcCCCCcceE-EEEE----ecCCCeEEecCCCCeeEEeecccccCcccccccccccceEeeeeeEEEeeCceeEE
Q psy7084 237 -----SPSHDNFIGT-SIPS----FNSQNRFYTDSNGREMIERILNYRQTWELDNQEPISSNYYPVTSRIAVVDDVLQMS 306 (326)
Q Consensus 237 -----i~i~d~~~~k-vv~r----i~s~~~fyTDsNG~~~ikR~~~~r~~w~~~~~~pia~NyYP~~s~~~I~D~~~~lt 306 (326)
||++|+ +|| +++| |++++.|||||||+|||||.+++|++|.++.++|+|||||||+++|||+|++.||+
T Consensus 691 w~VGpIp~~d~-~gkEvVtr~~t~i~S~g~fYTDSNGRe~~kR~~d~r~~~~~~~~epiAGNYYPvt~~i~lqD~~~rl~ 769 (996)
T KOG1959|consen 691 WLVGPIPIDDG-IGKEVVTRFSTEISSNGVFYTDSNGREMIKRVRDKREDFVLDVNEPIAGNYYPVTSRIYLQDSKKRLS 769 (996)
T ss_pred EEecceecCCC-ccceEEEEeccccccCceEEecCcHHHHHHHHhcccCCCccccCccccccccccceeeEEecCCceEE
Confidence 999999 999 9999 89999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCCcceeeccCCCeeeeC
Q psy7084 307 VLTDRAQGGTSLKKGEIELM 326 (326)
Q Consensus 307 Vl~drs~G~sSl~~G~lElM 326 (326)
||+||||||||++||+||||
T Consensus 770 vL~DRAqGgsSl~dG~lElM 789 (996)
T KOG1959|consen 770 VLNDRAQGGSSLKDGQLELM 789 (996)
T ss_pred EEeecccCCccccCCeEEEE
Confidence 99999999999999999999
No 2
>PLN02701 alpha-mannosidase
Probab=100.00 E-value=2.3e-51 Score=437.85 Aligned_cols=261 Identities=23% Similarity=0.353 Sum_probs=210.9
Q ss_pred ccccCcccc-cccccccccCCc-----CCCeeEEEEEcCCCceEEEEEEEe---e--------------eeec-------
Q psy7084 43 PVVSTVKTC-LYLNISSCEPSE-----TWDKFAINVYNALGRTVNRYVLQL---A--------------ERTS------- 92 (326)
Q Consensus 43 ~~~~~~~~c-~~ln~s~C~~t~-----~~~~~~vvVyNpL~~~r~~vV~v~---P--------------qi~~------- 92 (326)
.+...|++| .++|++.||+++ .++.+.|||||||+|+|+++|+|+ + |+..
T Consensus 498 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvvfNpL~~~r~~vV~v~V~~~~~~V~d~~g~~v~~Qi~~~~~~~~~ 577 (1050)
T PLN02701 498 QTPSWFEPEQSRSKYDMLPVHKVINLREGKAHRVVFFNPLEQTREEVVMVVVDRPAVCVFDSNWTCVPSQISPEWQHDGE 577 (1050)
T ss_pred cccccccccccccccccccccccccccCCCceEEEEECCCCceeeEEEEEEecCCcEEEEcCCCCEEeEEEecccccccc
Confidence 334567788 568999999884 456688999999999999999998 1 3311
Q ss_pred cCCCCcEEEEEEEecCCCceEEEEEEeCCCCCC---C---------------------CCCCCceeEeeceEEEEEcC-C
Q psy7084 93 QNSSAKMELVFKATLPPMGYSSFFVSTGPGKTS---E---------------------VSPSHDNFIGTSMFGLRLDK-D 147 (326)
Q Consensus 93 ~~~~~~~~L~F~a~vPpLG~~ty~v~~~~~~~~---~---------------------~~~~~~~~IeN~~lkl~fd~-~ 147 (326)
......|+|+|.|+||||||++|+|+....... + ....+.++|||++++|+||+ +
T Consensus 578 ~~~~~~~~l~F~a~vPplG~~ty~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ieN~~lkl~Fd~~T 657 (1050)
T PLN02701 578 KLFTGRHRLYWKASVPALGLETYFIANGNVSCEKAVPAKLKVFNSDDKFPCPEPYSCSKLEGDTVEISNSHQTLGFDVKT 657 (1050)
T ss_pred ccccceEEEEEEEecCCceeEEEEEEEcCCCcccccccccccccccccccccccccccccCCCcEEEecCeEEEEEcCCC
Confidence 123458999999999999999999986432110 0 00123578999999999998 9
Q ss_pred CCEEEEEE--CCceeeeeEEEEEEeccccCCCCCCCCCCCCceeEecCCCCceEeecc----cc-cCccEEEEEEEec--
Q psy7084 148 GLVSQLLK--NNHSLPMTQTFGYYVGHESDYGNNDNGEMSSGAYIFKPEVNKSVVSKS----EV-NDSTVEDVVRLLS-- 218 (326)
Q Consensus 148 G~L~sl~~--~~~~~~~~~~f~~Y~~~~~~~Gd~~~~~~~sGAYiF~P~~~~~~~~~~----~v-~Gpl~~ev~~~~~-- 218 (326)
|+|+++++ +|++..+.++|.+|.+. .||||+|+|+++....... .+ +||++++|++.+.
T Consensus 658 G~L~si~~~~~g~~~~v~q~f~~Y~s~------------~SGAYiFrP~~~~~p~~~~~~~~~v~~Gplv~eV~~~~~~~ 725 (1050)
T PLN02701 658 GLLRKIKIHKNGSETVVGEEIGMYSSQ------------GSGAYLFKPDGEAQPIVQAGGLVVVSEGPLVQEVHSVPKTK 725 (1050)
T ss_pred CceeEEEecccCceecceeeeeeecCC------------CCcceEEcCCCCCcccCCCCceEEEEeCCEEEEEEEEeecc
Confidence 99999987 78888999999999753 5899999998654322222 13 8999999998752
Q ss_pred --CcEEE--EEEecC-----CCCeEEE------EcCCCCcceE-EEEE----ecCCCeEEecCCCCeeEEeecccccCcc
Q psy7084 219 --NGEVT--TTVYKG-----PGKTSEV------SPSHDNFIGT-SIPS----FNSQNRFYTDSNGREMIERILNYRQTWE 278 (326)
Q Consensus 219 --~~~~s--vrLy~~-----~~~~vEV------i~i~d~~~~k-vv~r----i~s~~~fyTDsNG~~~ikR~~~~r~~w~ 278 (326)
++|++ +|||++ .. ++|+ ||. |. .|| ++|| |+|+++||||+|||||+||+ +|+
T Consensus 726 ~~~s~isQ~iRLY~~~~~~~~~-~vE~e~~V~~ip~-d~-~~kEii~R~~T~i~s~~~FYTDsNG~qm~kR~-----~~~ 797 (1050)
T PLN02701 726 WEKSPLSRSTRLYHGGKSVQDL-SVEKEYHVELLGH-DF-NDKELIVRFKTDIDNKRVFYSDLNGFQMSRRE-----TYD 797 (1050)
T ss_pred cCCcceEEEEEEecCCCccccc-eEEEEEEecCccc-CC-CCcEEEEEEeecccCCCeEEEcCccceeeeec-----ccc
Confidence 46777 999998 45 7885 555 55 699 9999 89999999999999999997 465
Q ss_pred cccccccccceEeeeeeEEEee-CceeEEEEeCCcceeeccCCCeeeeC
Q psy7084 279 LDNQEPISSNYYPVTSRIAVVD-DVLQMSVLTDRAQGGTSLKKGEIELM 326 (326)
Q Consensus 279 ~~~~~pia~NyYP~~s~~~I~D-~~~~ltVl~drs~G~sSl~~G~lElM 326 (326)
++|+|||||||+++|||+| ++.||||+|||||||||+++|+||||
T Consensus 798 ---~~Pv~gNYYPv~s~a~IqD~~~~rltvltdrs~G~sSl~~GqLEiM 843 (1050)
T PLN02701 798 ---KIPLQGNYYPMPSLAFLQGSNGQRFSVHSRQSLGVASLKNGWLEIM 843 (1050)
T ss_pred ---cCccccccccccceEEEEcCCCCeEEEEeccCcccccCCCcEEEEE
Confidence 5999999999999999999 67999999999999999999999999
No 3
>KOG1958|consensus
Probab=100.00 E-value=2.9e-35 Score=298.28 Aligned_cols=238 Identities=25% Similarity=0.404 Sum_probs=188.9
Q ss_pred eEEEEEcCCCceEEEEEEEe---e--------------eeec--------cCCCCcEEEEEEEecCCCceEEEEEEeCCC
Q psy7084 68 FAINVYNALGRTVNRYVLQL---A--------------ERTS--------QNSSAKMELVFKATLPPMGYSSFFVSTGPG 122 (326)
Q Consensus 68 ~~vvVyNpL~~~r~~vV~v~---P--------------qi~~--------~~~~~~~~L~F~a~vPpLG~~ty~v~~~~~ 122 (326)
..||+||||.++|.++|+|. | |+.. ......|+|+|.|+|||||..+|++.....
T Consensus 644 ~~vvlfN~l~q~R~evv~i~V~sp~V~V~~d~g~pv~~Qispvw~~~~tk~~~~~~~~l~f~a~vpplgl~v~~~~~~~~ 723 (1129)
T KOG1958|consen 644 RSVVLFNPLEQEREEVVTIRVNSPEVSVLDDGGVPVEAQISPVWQDTKTKTIKPGSYRLSFKATVPPLGLMVLRIDSGGL 723 (1129)
T ss_pred ceEEEeccchhhhhccEEEEecCCeeEEEcCCCceeeEeeccceeccccceeecceeEEEEEEecccceeeEEEeeccCc
Confidence 56999999999999999887 2 3321 112348999999999999999999987632
Q ss_pred CCC---C-------C----C------CCCceeEeeceEEEEEcC-CCCEEEEEE--CCceeeeeEEEEEEeccccCCCCC
Q psy7084 123 KTS---E-------V----S------PSHDNFIGTSMFGLRLDK-DGLVSQLLK--NNHSLPMTQTFGYYVGHESDYGNN 179 (326)
Q Consensus 123 ~~~---~-------~----~------~~~~~~IeN~~lkl~fd~-~G~L~sl~~--~~~~~~~~~~f~~Y~~~~~~~Gd~ 179 (326)
.+. + . + ..+-.+++|++.+|.||+ +|+|+++.. +++...+...|..|....
T Consensus 724 ~~~~~l~s~~~~~~~~~~~s~~~~~~~~~~s~~~~~~~~l~fd~~~G~i~~~~~~~D~~~~~~q~~f~~y~~~~------ 797 (1129)
T KOG1958|consen 724 TEHAKLPSKDTSFPAWDLGSSSTIGDSRELSTLRNEYFELRFDPETGTIKSINSLSDNKHFESQVSFSNYGERI------ 797 (1129)
T ss_pred ccccccccCCCCcccCCCccceeecCccccceeeccceeEEeccccchhhhhhhcccCCCcccceeeccccccc------
Confidence 211 0 0 0 112347999999999997 999998876 677777888999997653
Q ss_pred CCCCCCCceeEecCCCCceEe-ecc---cc--cCccEEEEEEEecCcEE----E-EEEecCCCCeEEE---EcCCCCcce
Q psy7084 180 DNGEMSSGAYIFKPEVNKSVV-SKS---EV--NDSTVEDVVRLLSNGEV----T-TTVYKGPGKTSEV---SPSHDNFIG 245 (326)
Q Consensus 180 ~~~~~~sGAYiF~P~~~~~~~-~~~---~v--~Gpl~~ev~~~~~~~~~----s-vrLy~~~~~~vEV---i~i~d~~~~ 245 (326)
.++.||||+|+|++. |.+ +.. .| +|+|+++|.+.. .+.+ . +|+|.|. .+|+ +++.+. .+
T Consensus 798 --~~~~sgaylf~p~G~-a~~~i~~~~p~v~v~g~L~qev~~~~-~~v~~~~~~~~~~~~G~--~vei~~~vdi~~~-~n 870 (1129)
T KOG1958|consen 798 --SGDESGAYLFLPDGN-AKPIIELQWPHVRVKGPLVQEVSQFL-KNVLHRLSQNVRGYSGE--EVEISNSVDIRKE-DN 870 (1129)
T ss_pred --cCCCCceEEEccCCC-CCCceecCCCeEEeecceeeeecccc-chHHHhchhheeccCCc--ceeeeceeecccc-cc
Confidence 245699999999964 444 221 23 899999999887 3322 2 8898886 4776 777755 56
Q ss_pred E-EEEE----ecCCCeEEecCCCCeeEEeecccccCcccccccccccceEeeeeeEEEeeCceeEEEEeCCcceeeccCC
Q psy7084 246 T-SIPS----FNSQNRFYTDSNGREMIERILNYRQTWELDNQEPISSNYYPVTSRIAVVDDVLQMSVLTDRAQGGTSLKK 320 (326)
Q Consensus 246 k-vv~r----i~s~~~fyTDsNG~~~ikR~~~~r~~w~~~~~~pia~NyYP~~s~~~I~D~~~~ltVl~drs~G~sSl~~ 320 (326)
. +++| +++++.||||+||+||+||.+- .+.|+++|||||++++||+|.+.||++++.|++|++||.+
T Consensus 871 ~Ela~R~st~vds~~~FyTDlnG~Q~~kR~~~--------~KlPlQaNyYPmpt~a~Iq~~~~RlsihS~q~lGvssL~s 942 (1129)
T KOG1958|consen 871 TELAMRFSTDVDSGDLFYTDLNGMQMIKRRRL--------DKLPLQANYYPMPTAAFIQDAKQRLSIHSAQSLGVSSLES 942 (1129)
T ss_pred hhhhhhhhhcccCCceeeeccchhhhhhhhhc--------ccCcccceeecccceeeeecCCceEEEEeecccCcccccc
Confidence 6 8888 7888899999999999999863 3699999999999999999999999999999999999999
Q ss_pred CeeeeC
Q psy7084 321 GEIELM 326 (326)
Q Consensus 321 G~lElM 326 (326)
|+||||
T Consensus 943 G~iEIm 948 (1129)
T KOG1958|consen 943 GQIEIM 948 (1129)
T ss_pred ceEEEE
Confidence 999998
No 4
>PF07748 Glyco_hydro_38C: Glycosyl hydrolases family 38 C-terminal domain; InterPro: IPR011682 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 38 GH38 from CAZY comprises enzymes with only one known activity; alpha-mannosidase (3.2.1.24 from EC) (3.2.1.114 from EC). This domain is found at the C terminus of glycosyl hydrolases from family 38.; GO: 0015923 mannosidase activity, 0006013 mannose metabolic process; PDB: 2WYI_A 2WYH_A 3LVT_A 3CZN_A 2FYV_A 3D50_A 3EJU_A 3EJS_A 3DX3_A 3BVX_A ....
Probab=99.97 E-value=4.2e-30 Score=254.75 Aligned_cols=245 Identities=24% Similarity=0.348 Sum_probs=169.4
Q ss_pred eEEEEEcCCCceEEEEEEEe---e--------------ee-eccCCCCcEEEEEEEecCCCceEEEEEEeCCCCCCCCCC
Q psy7084 68 FAINVYNALGRTVNRYVLQL---A--------------ER-TSQNSSAKMELVFKATLPPMGYSSFFVSTGPGKTSEVSP 129 (326)
Q Consensus 68 ~~vvVyNpL~~~r~~vV~v~---P--------------qi-~~~~~~~~~~L~F~a~vPpLG~~ty~v~~~~~~~~~~~~ 129 (326)
|+|+|||||+|+|+++|+|+ | |+ +......+++|+|.++||||||++|++............
T Consensus 1 ~~vvvfN~l~~~r~~vv~i~v~~~~~~~~~~~g~~v~~qi~~~~~~~~~~~l~f~~~vPalGy~~~~i~~~~~~~~~~~~ 80 (457)
T PF07748_consen 1 FPVVVFNPLPWPRSEVVEIPVNTPNVSVYDADGKPVPSQIIPEPYSTGRYELLFVVDVPALGYKTYRIVEGESSEPSNEA 80 (457)
T ss_dssp EEEEEEE-SSS-EEEEEEEEEEECEEEEECSTSHEEHCEEEEEEEEEEEEEEEEEEEE-TTEEEEEEEEECSS--TTC--
T ss_pred CEEEEEECCCCcEEEEEEEEeccCceEEEecCCcEeeEEEEeccCCCCceEEEEEeccCCceeEEEEeeccccccccccc
Confidence 67999999999999999998 1 11 112234578999999999999999999987655443211
Q ss_pred -----CCceeEeeceEEEEEcC-CCCEEEEEE--CCceee--eeEEEEEEeccccCCCCCC---CCCCCCceeEecCCCC
Q psy7084 130 -----SHDNFIGTSMFGLRLDK-DGLVSQLLK--NNHSLP--MTQTFGYYVGHESDYGNND---NGEMSSGAYIFKPEVN 196 (326)
Q Consensus 130 -----~~~~~IeN~~lkl~fd~-~G~L~sl~~--~~~~~~--~~~~f~~Y~~~~~~~Gd~~---~~~~~sGAYiF~P~~~ 196 (326)
.++..|||++++++||+ +|.|.++++ +|++.. ...+|..|.+.. ++.. ...+.+|+|.|+|++.
T Consensus 81 ~~~~~~~~~~leN~~~~v~~~~~tG~i~sl~dk~~g~~~~~~~~~~~~~y~~~~---~~~~~~~~~~~~~~~~~~~~~g~ 157 (457)
T PF07748_consen 81 SIAKDSGDNVLENEFYKVTFDPNTGGIKSLYDKKTGREYVDQDGNDFYIYEDID---GDYDISPLELQRSGAYLFVEDGP 157 (457)
T ss_dssp CEEETT-TTEEETSSEEEEE-TTTSSEEEEEETTTS-EEEEEECEEEEEEEBTT---SCTTE-SCCCGSEECCEEEEESS
T ss_pred eeecceeeEEEEccEEEEEEeCCCCeEEEEEEccCCeEEEeecCCceeEecccc---ccccccccccccCceEEEEecCC
Confidence 13479999999999999 599999988 788877 889999998753 2211 1234689999998754
Q ss_pred ceEee--cccc--cC--ccEEEEEEEecCcEEE--EEEecCCCCeEEE---Ec-CCCCcceE-EEEE----ecCCCeEEe
Q psy7084 197 KSVVS--KSEV--ND--STVEDVVRLLSNGEVT--TTVYKGPGKTSEV---SP-SHDNFIGT-SIPS----FNSQNRFYT 259 (326)
Q Consensus 197 ~~~~~--~~~v--~G--pl~~ev~~~~~~~~~s--vrLy~~~~~~vEV---i~-i~d~~~~k-vv~r----i~s~~~fyT 259 (326)
....+ .... .+ .++.++.... ...++ ++||++++ .||| |+ |... ..+ ++++ ++++..||+
T Consensus 158 ~~~~i~~~~~~~~p~~~~~~~~~~~~~-~~~i~~~i~L~~~~~-~ie~~~~vdn~~~~-~~~~l~~~f~t~i~~~~~~~~ 234 (457)
T PF07748_consen 158 LRSSIRVEYKFELPKNLSLVKRSEQTG-SSRITQTIRLYKGSP-RIEFETEVDNWAED-HRKELRVRFPTNIDSDEAFYD 234 (457)
T ss_dssp SEEEEEEEEEEEEESCBECEEEESCEE-EEEEEEEEEEETTES-SEEEEEEEEE-TTS-CEEEEEEEEEES-S-TCEEEE
T ss_pred ceEEEEEEEEEeccCCcEEEEEEEecc-ceEEEEEEEEecCce-EEEEEEEecccccC-CceeEEEEeecCCCCCCEEEE
Confidence 32221 1111 11 1223332223 23444 99999999 9997 66 6655 333 6666 788899999
Q ss_pred cCCCCeeEEeecccccCcccccccccccceEeeeeeEEEeeCceeEEEEeCCcceeeccC-CCeeeeC
Q psy7084 260 DSNGREMIERILNYRQTWELDNQEPISSNYYPVTSRIAVVDDVLQMSVLTDRAQGGTSLK-KGEIELM 326 (326)
Q Consensus 260 DsNG~~~ikR~~~~r~~w~~~~~~pia~NyYP~~s~~~I~D~~~~ltVl~drs~G~sSl~-~G~lElM 326 (326)
|++|+.+.+|+.+. +.|+++|||||.+.++|.|++.+|+|++|+++|.+++. +|+||||
T Consensus 235 ~~fG~~~r~~~~~~--------~~~~~~~~~p~~~~~~v~~~~~~l~i~~d~~~g~~~~~~~g~l~lt 294 (457)
T PF07748_consen 235 DQFGFIERKRPTHP--------NTPWEANYYPVPSHAFVDDSDSRLAILNDGKYGYESLDQDGELELT 294 (457)
T ss_dssp ESTTEEEEECESST--------TTTCGGG-EEECSCCEEEECSECEEEEESS-EEEEECTTTTEEEEE
T ss_pred CCCCeEEecCCccc--------cCCcccccCCCcceEEEEcCCCCEEEEcCCCcceEeccCCCeEEEE
Confidence 98886654435322 37889999999999999999988999999999998887 9999997
No 5
>PRK09819 alpha-mannosidase; Provisional
Probab=99.86 E-value=5.3e-20 Score=196.57 Aligned_cols=233 Identities=16% Similarity=0.253 Sum_probs=162.9
Q ss_pred CCeeEEEEEcCCCceEEEEEEEe---e----------------eeecc---------------CC---CCcEEEEEEE-e
Q psy7084 65 WDKFAINVYNALGRTVNRYVLQL---A----------------ERTSQ---------------NS---SAKMELVFKA-T 106 (326)
Q Consensus 65 ~~~~~vvVyNpL~~~r~~vV~v~---P----------------qi~~~---------------~~---~~~~~L~F~a-~ 106 (326)
++...++|||||+|+|+++|+++ | ++... .. ..++.+.|.+ +
T Consensus 381 ~~~~~~~vfN~l~~~r~~~v~i~~~~~~~~~~~~d~~g~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~f~~~~ 460 (875)
T PRK09819 381 SDADKLTVFNLLPYEREEVINTTVYLPASQFTLRDDRGNPLPYTIREKRDIDPGLLDRQIVHYGNYDPFMEFDIQINVQI 460 (875)
T ss_pred CCCCEEEEEcCCCccceeEEEEEEEeccCCEEEECCCCCEeeEEEeeccccccchhhcceeccCCCCceEEEEEEEEECC
Confidence 34577999999999999999885 1 11100 00 1156788985 8
Q ss_pred cCCCceEEEEEEeCCCCCC-CCCCCCceeEeeceEEEEEcCCCCEEEEEE--CCceeeeeEEEEEEeccccCCCCCCCCC
Q psy7084 107 LPPMGYSSFFVSTGPGKTS-EVSPSHDNFIGTSMFGLRLDKDGLVSQLLK--NNHSLPMTQTFGYYVGHESDYGNNDNGE 183 (326)
Q Consensus 107 vPpLG~~ty~v~~~~~~~~-~~~~~~~~~IeN~~lkl~fd~~G~L~sl~~--~~~~~~~~~~f~~Y~~~~~~~Gd~~~~~ 183 (326)
||||||++|.+........ .........|||++++|+||++|.| +|++ +|++ + .++..|++. ||
T Consensus 461 vP~lG~~~~~i~~~~~~~~~~~~~~~~~~ieN~~~~v~i~~~G~l-~l~dk~~gr~--~-~~~~~~~d~----~d----- 527 (875)
T PRK09819 461 LPAMGYRTLYIELNEEGNVIEPKSSAEGIIENEFYQITLNENGTL-TIVDKKSGKT--Y-DRQLIIEEN----GD----- 527 (875)
T ss_pred CCCcccEEEEEEeCCccccccccccccceEecCcEEEEEecCCcE-EEEECCCCcE--E-eceEEEEec----Cc-----
Confidence 9999999999876433211 1123346789999999999999999 6887 5666 2 456677764 44
Q ss_pred CCCceeEecCCCCceEeec-c---c--c-cCccEEEEEEEec-----------------CcEEE--EEEecCCCCeEEE-
Q psy7084 184 MSSGAYIFKPEVNKSVVSK-S---E--V-NDSTVEDVVRLLS-----------------NGEVT--TTVYKGPGKTSEV- 236 (326)
Q Consensus 184 ~~sGAYiF~P~~~~~~~~~-~---~--v-~Gpl~~ev~~~~~-----------------~~~~s--vrLy~~~~~~vEV- 236 (326)
.++||.|.|..++..... . . + +|++..++++++. ...++ ++|+++++ .|||
T Consensus 528 -~gD~yd~~p~~~d~~~~~~~~~~~~~v~~~~~~~~~~i~~~~~~p~~~~~r~~~~~~~~~~i~~~i~L~~~s~-~i~~~ 605 (875)
T PRK09819 528 -DGDEYDYSPPREDWVITSAEAVPSVEISHSAWQSRAVIRYRLAVPKNLEERAAGQKTGRMPVKLVVTLSKNSR-RIDFD 605 (875)
T ss_pred -CCCCcccCCCCCCCEEeccCCcceEEEEEcCCeEEEEEEEEEeCCcChhhHhhccccceEEEEEEEEEecCCC-EEEEE
Confidence 589999999765533221 1 1 2 7888888776642 11222 89999999 9998
Q ss_pred --EcCCCCcceE-EEEE----ecCCCeEEecCCCCeeEEeeccc--ccCcccccc--cccccceEeeeeeEEEeeCceeE
Q psy7084 237 --SPSHDNFIGT-SIPS----FNSQNRFYTDSNGREMIERILNY--RQTWELDNQ--EPISSNYYPVTSRIAVVDDVLQM 305 (326)
Q Consensus 237 --i~i~d~~~~k-vv~r----i~s~~~fyTDsNG~~~ikR~~~~--r~~w~~~~~--~pia~NyYP~~s~~~I~D~~~~l 305 (326)
|+|+.. .+ +++. +.++. .+.| -+|++++|+.+. ..+|+.... .|+. .||+.++++|+|++.++
T Consensus 606 ~~vdw~~~--~~~Lrv~fp~~i~~~~-~~~d-~~fG~i~Rp~~~~~~~~W~~~~~~e~p~~--~~~~~~~v~ls~~~~Gv 679 (875)
T PRK09819 606 VNLDNQAD--DHRLRVLFPTEIASKF-SLAD-QQFGSITRPVNDPAMDVWEQEGWQEAPIS--IEPMQSFVALHDERHGV 679 (875)
T ss_pred EEEecccc--ceEEEEEccCCCCCCc-eEcC-CCceEEECCCcCccccccccccceeCCCC--ChhhhceEEEecCCceE
Confidence 555443 22 3333 55544 5566 779999999754 357876543 3444 89999999999999999
Q ss_pred EEEeCCcceeecc
Q psy7084 306 SVLTDRAQGGTSL 318 (326)
Q Consensus 306 tVl~drs~G~sSl 318 (326)
+|++|+.+|-.-.
T Consensus 680 all~dg~~ey~v~ 692 (875)
T PRK09819 680 AVFTEGVREYEII 692 (875)
T ss_pred EEECCCcceEEEe
Confidence 9999999997443
No 6
>KOG4342|consensus
Probab=99.21 E-value=1.7e-10 Score=115.28 Aligned_cols=263 Identities=16% Similarity=0.136 Sum_probs=157.7
Q ss_pred hhhhhhhheeccCCC--C-CCccccccCcccccccc-------------cccccCCcCCCeeEEEEEcCCCceEEEEEEE
Q psy7084 23 DWQHVKRNLMRPSGS--S-HGSHPVVSTVKTCLYLN-------------ISSCEPSETWDKFAINVYNALGRTVNRYVLQ 86 (326)
Q Consensus 23 ~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~c~~ln-------------~s~C~~t~~~~~~~vvVyNpL~~~r~~vV~v 86 (326)
.-||+-|.+|+-+=+ . .+|..-.-+-..|.+-+ ...| .++.++ -.+++.|+|+|+|.+++.+
T Consensus 601 qlq~LWr~~LLcQFHDVlpGSCIeMVykeA~p~~~~v~k~~~tLl~~a~~~L~-as~s~k-e~L~~~nTLpW~~~~v~~~ 678 (1078)
T KOG4342|consen 601 QLQHLWRLLLLCQFHDVLPGSCIEMVYKEAMPHYEDVRKHGNTLLSAAAAALC-ASESGK-EGLLIVNTLPWKRIEVMAL 678 (1078)
T ss_pred HHHHHHHHHHHHHhcccCCcHHHHHHHHhhhhHHHHHHHhhHHHHHHHHHHHh-cCCCCc-cceEEEeccccceeeeecc
Confidence 358888888887544 1 22443322222343322 2245 233443 3488999999999999998
Q ss_pred eeeeeccCCCCcEEEEE-EEecCCCceEEEEEEeCCCCCCCC---CCCCceeEeeceEEEEEcCCCCEEEEEE--CCcee
Q psy7084 87 LAERTSQNSSAKMELVF-KATLPPMGYSSFFVSTGPGKTSEV---SPSHDNFIGTSMFGLRLDKDGLVSQLLK--NNHSL 160 (326)
Q Consensus 87 ~Pqi~~~~~~~~~~L~F-~a~vPpLG~~ty~v~~~~~~~~~~---~~~~~~~IeN~~lkl~fd~~G~L~sl~~--~~~~~ 160 (326)
|. ..+- .++ ..++|.+|++... +...|. ..++.++|.|+.+++.++++|.|+++.+ .|++.
T Consensus 679 ~k-------p~k~-~~~e~c~~~g~~ta~vt-----~~~~p~~~yq~Dd~~~L~Ng~lrV~i~p~G~itSl~d~~~grE~ 745 (1078)
T KOG4342|consen 679 PK-------PGKA-HSLELCTVPGMGTAPVT-----PPTSPVFVYQTDDSVTLDNGILRVKIDPTGRITSLVDVASGREA 745 (1078)
T ss_pred cC-------CCCc-eeEEEeccCCccccCCC-----CCCCceeEEecCCeEEEECCEEEEEECCCCceeeeeehhcccch
Confidence 61 1111 122 3467777765321 111111 1346789999999999999999999998 45441
Q ss_pred e--------e-eEEEEEEeccccCCCCCCCCCCCCceeEecCCCCceEeecc---c--c--cCccEEEEEEEec-Cc--E
Q psy7084 161 P--------M-TQTFGYYVGHESDYGNNDNGEMSSGAYIFKPEVNKSVVSKS---E--V--NDSTVEDVVRLLS-NG--E 221 (326)
Q Consensus 161 ~--------~-~~~f~~Y~~~~~~~Gd~~~~~~~sGAYiF~P~~~~~~~~~~---~--v--~Gpl~~ev~~~~~-~~--~ 221 (326)
. + ..+|..|++.- = .=|+=+.=+|.-. ..++.. + | +|+++..|.+.+. ++ .
T Consensus 746 ld~~~Grn~~GaNQfVlfdD~P---L----~WqAWDte~ysle---~y~vl~k~k~v~v~~~g~lr~sv~v~~qISe~s~ 815 (1078)
T KOG4342|consen 746 LDTAEGRNAVGANQFVLFDDVP---L----YWQAWDTEDYSLE---RYPVLGKAKTVAVGTEGGLRGSVWVLLQISENSR 815 (1078)
T ss_pred hcccccccccCcccEEEecCCc---c----chhhhhhhhhcee---cceecCCCceEEeecCCCcceEEEEEEEcCcccc
Confidence 1 1 14566665420 0 0011111112111 111111 1 2 7888877754431 22 3
Q ss_pred EE--EEEecCCC----CeEEE---EcCCCCcceE-EEEE----ecCCCeEEecCCCCeeEEeecccccCccccccccccc
Q psy7084 222 VT--TTVYKGPG----KTSEV---SPSHDNFIGT-SIPS----FNSQNRFYTDSNGREMIERILNYRQTWELDNQEPISS 287 (326)
Q Consensus 222 ~s--vrLy~~~~----~~vEV---i~i~d~~~~k-vv~r----i~s~~~fyTDsNG~~~ikR~~~~r~~w~~~~~~pia~ 287 (326)
+. |.|-.+-. ..|.+ +.|++. .| +.+. |.+. |=+-.-.|++.||+.+|+++|+....+.+..
T Consensus 816 ~k~~isL~~~~~~ak~~~V~f~teV~Whe~--~KFLKVEFPv~irs~--fAsYEtQFGitkRPTHYNTSWDvAkFEVchh 891 (1078)
T KOG4342|consen 816 LKQEISLDVGCTDAKLPYVRFHTEVHWHEA--HKFLKVEFPVRIRSS--FASYETQFGITKRPTHYNTSWDVAKFEVCHH 891 (1078)
T ss_pred cceEEEEecccccccCCceeeEEEEeehhc--CceEEeecccccccc--chhhhhhcccccCCccccccchhhHhHHHHh
Confidence 32 55543331 14444 778765 67 7666 5553 4333467999999999999999999999998
Q ss_pred ceEeeeeeEEEeeCceeEEEEeCCcceeeccCCC
Q psy7084 288 NYYPVTSRIAVVDDVLQMSVLTDRAQGGTSLKKG 321 (326)
Q Consensus 288 NyYP~~s~~~I~D~~~~ltVl~drs~G~sSl~~G 321 (326)
.| ++.+|-..+++||||+++|. |.+..
T Consensus 892 kf------aDySe~~~Gvs~LNDCKYGf-SthGn 918 (1078)
T KOG4342|consen 892 KF------ADYSEHGFGVSLLNDCKYGF-STHGN 918 (1078)
T ss_pred hh------hhhhhcccceeeeccccccc-ccccc
Confidence 77 99999999999999999997 54443
No 7
>COG0383 AMS1 Alpha-mannosidase [Carbohydrate transport and metabolism]
Probab=98.06 E-value=4.7e-05 Score=82.34 Aligned_cols=212 Identities=16% Similarity=0.146 Sum_probs=124.6
Q ss_pred eeEEEEEcCCCceEE-EEEEEeeeeeccCCCCcE--EEEEEEecCCCceEEEEEEeCCCCCCCCCCCCceeEeeceEEEE
Q psy7084 67 KFAINVYNALGRTVN-RYVLQLAERTSQNSSAKM--ELVFKATLPPMGYSSFFVSTGPGKTSEVSPSHDNFIGTSMFGLR 143 (326)
Q Consensus 67 ~~~vvVyNpL~~~r~-~vV~v~Pqi~~~~~~~~~--~L~F~a~vPpLG~~ty~v~~~~~~~~~~~~~~~~~IeN~~lkl~ 143 (326)
.-.+.++|++.|.+. ..|.-. .....+ .+...-++|++|.+.++++..... + .....+++..+..
T Consensus 552 ~e~~~~~~~~~~~~~~~~v~d~------~~~~~~~~~~~~~ed~~~~g~~~i~~~~~~~~--~----~~~~~~~~~~~~~ 619 (943)
T COG0383 552 LENLFVKNTLSWNGISLQVLDK------TSGGIYTSQLTALEDVGDIGNEYIYSQPTKTE--P----ETVIEEKEWKRLI 619 (943)
T ss_pred ccceEEEeeccCCcceEEEEEc------CCCceehhhhhhhhhcCCcccceeEecccccc--c----cccccccchheee
Confidence 346899999999982 222111 011111 011123699999999988332211 1 2233445555666
Q ss_pred EcCCC-CEEEEEECCceeeeeEEEEEEeccccCCCCCCCCCCCCceeEecCCCC-ceEeecccc-cCccEEEEEEEecCc
Q psy7084 144 LDKDG-LVSQLLKNNHSLPMTQTFGYYVGHESDYGNNDNGEMSSGAYIFKPEVN-KSVVSKSEV-NDSTVEDVVRLLSNG 220 (326)
Q Consensus 144 fd~~G-~L~sl~~~~~~~~~~~~f~~Y~~~~~~~Gd~~~~~~~sGAYiF~P~~~-~~~~~~~~v-~Gpl~~ev~~~~~~~ 220 (326)
++.+| .+..+.+ ...++. .+.-.++....... ...+ ...+ +||+..+++......
T Consensus 620 ~~~~gn~~~~~~~---------~~~~~~------------~w~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 677 (943)
T COG0383 620 INDTGNQLALIED---------EPAYWD------------AWNIDKFLEEELLALTALP-EEAIENGPLVRTVRVSKELT 677 (943)
T ss_pred ccCCCcceeeeec---------ccceec------------hhcchhhhhhhhhhhhccc-cchhccccceeeeeeeeecc
Confidence 66677 4432221 111111 11223333322211 1111 1123 999999998665222
Q ss_pred ---EEE-EEEecCCCCeEEE---EcCCCCcceEEEEE------ecCCCeEEecCCCCeeEEeecccccCccccccccccc
Q psy7084 221 ---EVT-TTVYKGPGKTSEV---SPSHDNFIGTSIPS------FNSQNRFYTDSNGREMIERILNYRQTWELDNQEPISS 287 (326)
Q Consensus 221 ---~~s-vrLy~~~~~~vEV---i~i~d~~~~kvv~r------i~s~~~fyTDsNG~~~ikR~~~~r~~w~~~~~~pia~ 287 (326)
.++ +++|++++ .++| +++..+ . +.+| +++ .|.+..-.|+.++|+.+..+.|+....+
T Consensus 678 ~~~i~~~i~l~~~s~-~l~~~t~vd~q~~--~-~~lrv~fp~~~~s--~~a~~d~~fg~v~Rp~~~~~~W~~a~~e---- 747 (943)
T COG0383 678 ESTITQKVTLYKGSP-RLDFKTEVDNQVR--D-HRLRVLFPTDIAS--DFATADIPFGVVERPTHPNTSWENARFE---- 747 (943)
T ss_pred ceEEEEEEEEecCCc-eeEEEEEEEcccc--c-eEEEEEecccccc--cceeccccceeeccCCCCchhhhcccCc----
Confidence 223 99999999 9887 555433 2 4444 444 3334457899999999999999977666
Q ss_pred ceEeeeeeEEEeeCcee--EEEEeCCcceeeccCCCeeee
Q psy7084 288 NYYPVTSRIAVVDDVLQ--MSVLTDRAQGGTSLKKGEIEL 325 (326)
Q Consensus 288 NyYP~~s~~~I~D~~~~--ltVl~drs~G~sSl~~G~lEl 325 (326)
-|+..++.+.|...+ +++++|+.+|++. +++.|.|
T Consensus 748 --~p~~~~vdls~~~~g~~vs~ln~~kYg~~~-~~~~l~l 784 (943)
T COG0383 748 --VPLQKFVDLSDGEYGVTVSLLGDCKYGIST-HGNLLAL 784 (943)
T ss_pred --chhhccccccCCccceeEeccCCcceeEec-cCCEEEE
Confidence 346677999999988 9999999999854 7776654
No 8
>PF11432 DUF3197: Protein of unknown function (DUF3197); InterPro: IPR024443 This domain, whose function is unknown, is found in bacterial proteins.; PDB: 1WN9_A 1WNA_A.
Probab=73.77 E-value=0.67 Score=37.06 Aligned_cols=27 Identities=33% Similarity=0.508 Sum_probs=17.0
Q ss_pred ChhhhhhhcccEEEEEeecccchhhhh
Q psy7084 1 MMALQEQLSNIRVTIMLNSFITDWQHV 27 (326)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 27 (326)
|.||++.|.+++..=..--+|||||.-
T Consensus 1 l~al~~aLk~~~~p~~~v~liTDwQd~ 27 (113)
T PF11432_consen 1 LQALKAALKGLRFPEAKVYLITDWQDQ 27 (113)
T ss_dssp HHHHHHHHTT---TT-EEEEEEE--SS
T ss_pred ChhHHHHHhcCCCCCceEEEEeccccc
Confidence 458999999988776667789999974
No 9
>PF02762 Cbl_N3: CBL proto-oncogene N-terminus, SH2-like domain; InterPro: IPR014742 Cbl (Casitas B-lineage lymphoma) is an adaptor protein that functions as a negative regulator of many signalling pathways that start from receptors at the cell surface. The N-terminal region of Cbl contains a Cbl-type phosphotyrosine-binding (Cbl-PTB) domain, which is composed of three evolutionarily conserved domains: an N-terminal four-helix bundle (4H) domain, an EF hand-like calcium-binding domain, and a divergent SH2-like domain. The calcium-bound EF-hand wedges between the 4H and SH2 domains, and roughly determines their relative orientation. The Cbl-PTB domain has also been named Cbl N-terminal (Cbl-N) or tyrosine kinase binding (TKB) domain [, ]. The N-terminal 4H domain contains four long alpha-helices. The C and D helices in this domain pack against the adjacent EF-hand-like domain, and a highly conserved loop connecting the A and B helices contacts the SH2-like domain. The EF-hand motif is similar to classical EF-hand proteins. The SH2-like domain retains the general helix-sheet-helix architecture of the SH2 fold, but lacks the secondary beta-sheet, comprising beta-strands D', E and F, and also a prominent BG loop []. This entry represents the SH2-like domain.; PDB: 3PFV_A 3VGO_A 3PLF_B 2Y1M_A 2CBL_A 3BUX_B 3BUN_B 3BUM_B 3OB1_B 3BUW_B ....
Probab=17.83 E-value=1.2e+02 Score=23.13 Aligned_cols=30 Identities=17% Similarity=0.334 Sum_probs=16.7
Q ss_pred CCCceeEecCCCCc--eEeecccc--cCccEEEEE
Q psy7084 184 MSSGAYIFKPEVNK--SVVSKSEV--NDSTVEDVV 214 (326)
Q Consensus 184 ~~sGAYiF~P~~~~--~~~~~~~v--~Gpl~~ev~ 214 (326)
.+.|+|+||..... .+.+. .| .|.+++.|-
T Consensus 23 ~kpGsYiFRlSCTrLGQWAIG-yV~~dg~I~QTIP 56 (86)
T PF02762_consen 23 DKPGSYIFRLSCTRLGQWAIG-YVTQDGKILQTIP 56 (86)
T ss_dssp TSTTEEEEEEESSSTTSEEEE-EEETTSEEEEE--
T ss_pred CCcccEEEeeccccccceeEE-EEcCCCcEEEecC
Confidence 45799999997643 12111 12 677766654
No 10
>PF06788 UPF0257: Uncharacterised protein family (UPF0257); InterPro: IPR010646 This is a group of proteins of unknown function.; GO: 0005886 plasma membrane
Probab=17.75 E-value=7.8e+02 Score=22.68 Aligned_cols=33 Identities=15% Similarity=0.124 Sum_probs=26.0
Q ss_pred CCceeEecCCCCceEeecccc---cCccEEEEEEEe
Q psy7084 185 SSGAYIFKPEVNKSVVSKSEV---NDSTVEDVVRLL 217 (326)
Q Consensus 185 ~sGAYiF~P~~~~~~~~~~~v---~Gpl~~ev~~~~ 217 (326)
-|..|.|.|-.|.-..++.++ .|.+..+|+.++
T Consensus 33 fSn~FdFDPlrGpVK~~tQt~~de~g~v~~~v~~~l 68 (236)
T PF06788_consen 33 FSNEFDFDPLRGPVKEFTQTLYDEDGEVTKRVSLTL 68 (236)
T ss_pred hhhhccCCcccCCceeeeEEEEcCCCcEEEEEEEEE
Confidence 367899999877655566555 899999999998
Done!