BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy7088
         (873 letters)

Database: pdbaa 
           62,578 sequences; 14,973,337 total letters

Searching..................................................done



>pdb|3P8C|A Chain A, Structure And Control Of The Actin Regulatory Wave Complex
          Length = 1253

 Score =  927 bits (2396), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 441/692 (63%), Positives = 528/692 (76%), Gaps = 50/692 (7%)

Query: 164  DSLQQCCDLSQLWYREFYLEMTMGRRIQKCVVRHQHNEECSDLITMEKRIQFPIEMSMPW 223
            ++LQQCCDLSQLW+REF+LE+TMGRRIQ                       FPIEMSMPW
Sbjct: 610  ETLQQCCDLSQLWFREFFLELTMGRRIQ-----------------------FPIEMSMPW 646

Query: 224  ILTDHILKTKEPSMMEYVLYPLDLYNDSAHYALTVFRKQFLYDEVEAEVNLCFDQFVYKL 283
            ILTDHIL+TKE SMMEYVLY LDLYNDSAHYALT F KQFLYDE+EAEVNLCFDQFVYKL
Sbjct: 647  ILTDHILETKEASMMEYVLYSLDLYNDSAHYALTRFNKQFLYDEIEAEVNLCFDQFVYKL 706

Query: 284  SEQIFAHYKQLAASMLLDKRFRVECMAMGTYLLAYPRANRYETLLRQRHVQLLGRSIDLN 343
            ++QIFA+YK +A S+LLDKR R EC   G   +  P +NRYETLL+QRHVQLLGRSIDLN
Sbjct: 707  ADQIFAYYKVMAGSLLLDKRLRSECKNQGA-TIHLPPSNRYETLLKQRHVQLLGRSIDLN 765

Query: 344  KLITQRINADMHKSLDLAISKFEHGDITGVVELEGLLAVNRXXXXXXXXXXXXDDYDAML 403
            +LITQR++A M+KSL+LAI +FE  D+T +VEL+GLL +NR            D +DAM 
Sbjct: 766  RLITQRVSAAMYKSLELAIGRFESEDLTSIVELDGLLEINRMTHKLLSRYLTLDGFDAMF 825

Query: 404  HEANHNVLAPYGRITLHIFWELNYDFLPNYCYNGATNRITLHIFWELNYDFLPNYCYNGA 463
             EANHNV APYGRITL                         H+FWELNYDFLPNYCYNG+
Sbjct: 826  REANHNVSAPYGRITL-------------------------HVFWELNYDFLPNYCYNGS 860

Query: 464  TNRFIKCRGIMFTQQIHREKLPPMTHTYSWGSKQLNMAYYSIYGQYTGFVGAYHFRAMCR 523
            TNRF++   + F+Q+  R+K P     Y  GSK LN+AY SIYG Y  FVG  HF+ +CR
Sbjct: 861  TNRFVRT-VLPFSQEFQRDKQPNAQPQYLHGSKALNLAYSSIYGSYRNFVGPPHFQVICR 919

Query: 524  LLGYQGIAVVMEELLKIVTSLIQGSLLQFTKTLMDAMPKQCKLPRYDYGSPGVLGYYHAQ 583
            LLGYQGIAVVMEELLK+V SL+QG++LQ+ KTLM+ MPK C+LPR++YGSPG+L ++H Q
Sbjct: 920  LLGYQGIAVVMEELLKVVKSLLQGTILQYVKTLMEVMPKICRLPRHEYGSPGILEFFHHQ 979

Query: 584  LNDIVQYPDAKTELFHNFRELGNTILFCLLMEQALSQEEVCDLLHAAPFQNILPRPYCKE 643
            L DIV+Y + KT  F N RE+GN ILFCLL+EQ+LS EEVCDLLHAAPFQNILPR + KE
Sbjct: 980  LKDIVEYAELKTVCFQNLREVGNAILFCLLIEQSLSLEEVCDLLHAAPFQNILPRVHVKE 1039

Query: 644  GEKPETKQKRLEQKYASLQIVSNIDRLGTAKQAMIAREGDLLTRERLCCGLSIFEVVLNR 703
            GE+ + K KRLE KYA L +V  I+RLGT +Q  IAREGDLLT+ERLCCGLS+FEV+L R
Sbjct: 1040 GERLDAKMKRLESKYAPLHLVPLIERLGTPQQIAIAREGDLLTKERLCCGLSMFEVILTR 1099

Query: 704  LRGFLDDPIWVGPPPTNGVINIDECTEFHRLWSALQFVYCIPVGDTEFTVEELFGEGLNW 763
            +R FLDDPIW GP P+NGV+++DEC EFHRLWSA+QFVYCIPVG  EFTVE+ FG+GL+W
Sbjct: 1100 IRSFLDDPIWRGPLPSNGVMHVDECVEFHRLWSAMQFVYCIPVGTHEFTVEQCFGDGLHW 1159

Query: 764  AGCTMIVLLGQQRRFEALDFCYHILRVQRVDGRDENVKGIHLKRMVDRIRRFQVVNSQIF 823
            AGC +IVLLGQQRRF  LDFCYH+L+VQ+ DG+DE +K + LK+MV+RIR+FQ++N +I 
Sbjct: 1160 AGCMIIVLLGQQRRFAVLDFCYHLLKVQKHDGKDEIIKNVPLKKMVERIRKFQILNDEII 1219

Query: 824  ATLNKYLGSSDADAASVEHVRCFPPPIHPSLA 855
              L+KYL S D +   VEHVRCF PPIH SLA
Sbjct: 1220 TILDKYLKSGDGEGTPVEHVRCFQPPIHQSLA 1251


>pdb|2W0U|A Chain A, Crystal Structure Of Human Glycolate Oxidase In Complex
           With The Inhibitor 5-[(4-Chlorophenyl)sulfanyl]-
           1,2,3-Thiadiazole-4-Carboxylate.
 pdb|2W0U|B Chain B, Crystal Structure Of Human Glycolate Oxidase In Complex
           With The Inhibitor 5-[(4-Chlorophenyl)sulfanyl]-
           1,2,3-Thiadiazole-4-Carboxylate.
 pdb|2W0U|C Chain C, Crystal Structure Of Human Glycolate Oxidase In Complex
           With The Inhibitor 5-[(4-Chlorophenyl)sulfanyl]-
           1,2,3-Thiadiazole-4-Carboxylate.
 pdb|2W0U|D Chain D, Crystal Structure Of Human Glycolate Oxidase In Complex
           With The Inhibitor 5-[(4-Chlorophenyl)sulfanyl]-
           1,2,3-Thiadiazole-4-Carboxylate
          Length = 370

 Score =  132 bits (332), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 73/187 (39%), Positives = 106/187 (56%), Gaps = 20/187 (10%)

Query: 1   MRNVCDRDSGLTVLGTRYRCPVGIAPSAMQKLAHADGEVATARAAGMMDAIMILSLMSTT 60
           +RNV + D   +VLG R   P+ +  +AMQ++AH DGE+AT RA   +   M+LS  +T+
Sbjct: 54  LRNVAETDLSTSVLGQRVSMPICVGATAMQRMAHVDGELATVRACQSLGTGMMLSSWATS 113

Query: 61  SLEEVRAQNPSTTLWLQMYIFKDRALSLQMVQRAERSGYSAIVITMDTAVLGSRYHISKF 120
           S+EEV    P    WLQ+YI+KDR ++ ++V++AE+ GY AI +T+DT  LG+R    + 
Sbjct: 114 SIEEVAEAGPEALRWLQLYIYKDREVTKKLVRQAEKMGYKAIFVTVDTPYLGNRLDDVRN 173

Query: 121 R-----------------DISAEEC---SSGLTDYVANQFDDSVDWDDVRSLVQATKLPI 160
           R                   S EE     SGL  YVA   D S+ W+D++ L + T LPI
Sbjct: 174 RFKLPPQLRMKNFETSTLSFSPEENFGDDSGLAAYVAKAIDPSISWEDIKWLRRLTSLPI 233

Query: 161 VCKDSLQ 167
           V K  L+
Sbjct: 234 VAKGILR 240


>pdb|2NZL|A Chain A, Crystal Structure Of Human Hydroxyacid Oxidase 1
          Length = 392

 Score =  132 bits (331), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 73/187 (39%), Positives = 106/187 (56%), Gaps = 20/187 (10%)

Query: 1   MRNVCDRDSGLTVLGTRYRCPVGIAPSAMQKLAHADGEVATARAAGMMDAIMILSLMSTT 60
           +RNV + D   +VLG R   P+ +  +AMQ++AH DGE+AT RA   +   M+LS  +T+
Sbjct: 76  LRNVAETDLSTSVLGQRVSMPICVGATAMQRMAHVDGELATVRACQSLGTGMMLSSWATS 135

Query: 61  SLEEVRAQNPSTTLWLQMYIFKDRALSLQMVQRAERSGYSAIVITMDTAVLGSRYHISKF 120
           S+EEV    P    WLQ+YI+KDR ++ ++V++AE+ GY AI +T+DT  LG+R    + 
Sbjct: 136 SIEEVAEAGPEALRWLQLYIYKDREVTKKLVRQAEKMGYKAIFVTVDTPYLGNRLDDVRN 195

Query: 121 R-----------------DISAEEC---SSGLTDYVANQFDDSVDWDDVRSLVQATKLPI 160
           R                   S EE     SGL  YVA   D S+ W+D++ L + T LPI
Sbjct: 196 RFKLPPQLRMKNFETSTLSFSPEENFGDDSGLAAYVAKAIDPSISWEDIKWLRRLTSLPI 255

Query: 161 VCKDSLQ 167
           V K  L+
Sbjct: 256 VAKGILR 262


>pdb|2RDT|A Chain A, Crystal Structure Of Human Glycolate Oxidase (Go) In
           Complex With Cdst
 pdb|2RDU|A Chain A, Crystal Structure Of Human Glycolate Oxidase In Complex
           With Glyoxylate
 pdb|2RDW|A Chain A, Crystal Structure Of Human Glycolate Oxidase In Complex
           With Sulfate
          Length = 387

 Score =  132 bits (331), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 73/187 (39%), Positives = 106/187 (56%), Gaps = 20/187 (10%)

Query: 1   MRNVCDRDSGLTVLGTRYRCPVGIAPSAMQKLAHADGEVATARAAGMMDAIMILSLMSTT 60
           +RNV + D   +VLG R   P+ +  +AMQ++AH DGE+AT RA   +   M+LS  +T+
Sbjct: 71  LRNVAETDLSTSVLGQRVSMPICVGATAMQRMAHVDGELATVRACQSLGTGMMLSSWATS 130

Query: 61  SLEEVRAQNPSTTLWLQMYIFKDRALSLQMVQRAERSGYSAIVITMDTAVLGSRYHISKF 120
           S+EEV    P    WLQ+YI+KDR ++ ++V++AE+ GY AI +T+DT  LG+R    + 
Sbjct: 131 SIEEVAEAGPEALRWLQLYIYKDREVTKKLVRQAEKMGYKAIFVTVDTPYLGNRLDDVRN 190

Query: 121 R-----------------DISAEEC---SSGLTDYVANQFDDSVDWDDVRSLVQATKLPI 160
           R                   S EE     SGL  YVA   D S+ W+D++ L + T LPI
Sbjct: 191 RFKLPPQLRMKNFETSTLSFSPEENFGDDSGLAAYVAKAIDPSISWEDIKWLRRLTSLPI 250

Query: 161 VCKDSLQ 167
           V K  L+
Sbjct: 251 VAKGILR 257


>pdb|1AL7|A Chain A, Three-Dimensional Structures Of Glycolate Oxidase With
           Bound Active- Site Inhibitors
 pdb|1AL8|A Chain A, Three-Dimensional Structure Of Glycolate Oxidase With
           Bound Active- Site Inhibitors
          Length = 359

 Score =  113 bits (283), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 73/178 (41%), Positives = 101/178 (56%), Gaps = 18/178 (10%)

Query: 3   NVCDRDSGLTVLGTRYRCPVGIAPSAMQKLAHADGEVATARAAGMMDAIMILSLMSTTSL 62
           +V + D   T+LG +   P+ IAP+AMQK+AH +GE ATARAA     IM LS  +T+S+
Sbjct: 54  DVTNIDMTTTILGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWATSSV 113

Query: 63  EEVRAQNPSTTLWLQMYIFKDRALSLQMVQRAERSGYSAIVITMDTAVLGSR-------- 114
           EEV +  P    + Q+Y++KDR +  Q+V+RAER+G+ AI +T+DT  LG R        
Sbjct: 114 EEVASTGPGIR-FFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRF 172

Query: 115 -----YHISKFRDISAEEC----SSGLTDYVANQFDDSVDWDDVRSLVQATKLPIVCK 163
                  +  F  I   +      SGL+ YVA Q D S+ W DV  L   T LPI+ K
Sbjct: 173 VLPPFLTLKNFEGIDLGKMDKANDSGLSSYVAGQIDRSLSWKDVAWLQTITSLPILVK 230


>pdb|1GYL|A Chain A, Involvement Of Tyr24 And Trp108 In Substrate Binding And
           Substrate Specificity Of Glycolate Oxidase
 pdb|1GYL|B Chain B, Involvement Of Tyr24 And Trp108 In Substrate Binding And
           Substrate Specificity Of Glycolate Oxidase
          Length = 369

 Score =  113 bits (283), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 73/178 (41%), Positives = 101/178 (56%), Gaps = 18/178 (10%)

Query: 3   NVCDRDSGLTVLGTRYRCPVGIAPSAMQKLAHADGEVATARAAGMMDAIMILSLMSTTSL 62
           +V + D   T+LG +   P+ IAP+AMQK+AH +GE ATARAA     IM LS  +T+S+
Sbjct: 54  DVTNIDMTTTILGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWATSSV 113

Query: 63  EEVRAQNPSTTLWLQMYIFKDRALSLQMVQRAERSGYSAIVITMDTAVLGSR-------- 114
           EEV +  P    + Q+Y++KDR +  Q+V+RAER+G+ AI +T+DT  LG R        
Sbjct: 114 EEVASTGPGIR-FFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRF 172

Query: 115 -----YHISKFRDISAEEC----SSGLTDYVANQFDDSVDWDDVRSLVQATKLPIVCK 163
                  +  F  I   +      SGL+ YVA Q D S+ W DV  L   T LPI+ K
Sbjct: 173 VLPPFLTLKNFEGIDLGKMDKANDSGLSSYVAGQIDRSLSWKDVAWLQTITSLPILVK 230


>pdb|1GOX|A Chain A, Refined Structure Of Spinach Glycolate Oxidase At 2
           Angstroms Resolution
          Length = 370

 Score =  113 bits (282), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 73/178 (41%), Positives = 101/178 (56%), Gaps = 18/178 (10%)

Query: 3   NVCDRDSGLTVLGTRYRCPVGIAPSAMQKLAHADGEVATARAAGMMDAIMILSLMSTTSL 62
           +V + D   T+LG +   P+ IAP+AMQK+AH +GE ATARAA     IM LS  +T+S+
Sbjct: 55  DVTNIDMTTTILGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWATSSV 114

Query: 63  EEVRAQNPSTTLWLQMYIFKDRALSLQMVQRAERSGYSAIVITMDTAVLGSR-------- 114
           EEV +  P    + Q+Y++KDR +  Q+V+RAER+G+ AI +T+DT  LG R        
Sbjct: 115 EEVASTGPGIR-FFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRF 173

Query: 115 -----YHISKFRDISAEEC----SSGLTDYVANQFDDSVDWDDVRSLVQATKLPIVCK 163
                  +  F  I   +      SGL+ YVA Q D S+ W DV  L   T LPI+ K
Sbjct: 174 VLPPFLTLKNFEGIDLGKMDKANDSGLSSYVAGQIDRSLSWKDVAWLQTITSLPILVK 231


>pdb|1TB3|A Chain A, Crystal Structure Analysis Of Recombinant Rat Kidney Long-
           Chain Hydroxy Acid Oxidase
 pdb|1TB3|B Chain B, Crystal Structure Analysis Of Recombinant Rat Kidney Long-
           Chain Hydroxy Acid Oxidase
 pdb|1TB3|C Chain C, Crystal Structure Analysis Of Recombinant Rat Kidney Long-
           Chain Hydroxy Acid Oxidase
 pdb|1TB3|D Chain D, Crystal Structure Analysis Of Recombinant Rat Kidney Long-
           Chain Hydroxy Acid Oxidase
 pdb|1TB3|E Chain E, Crystal Structure Analysis Of Recombinant Rat Kidney Long-
           Chain Hydroxy Acid Oxidase
 pdb|1TB3|F Chain F, Crystal Structure Analysis Of Recombinant Rat Kidney Long-
           Chain Hydroxy Acid Oxidase
 pdb|1TB3|G Chain G, Crystal Structure Analysis Of Recombinant Rat Kidney Long-
           Chain Hydroxy Acid Oxidase
 pdb|1TB3|H Chain H, Crystal Structure Analysis Of Recombinant Rat Kidney Long-
           Chain Hydroxy Acid Oxidase
          Length = 352

 Score = 91.7 bits (226), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 57/178 (32%), Positives = 91/178 (51%), Gaps = 10/178 (5%)

Query: 1   MRNVCDRDSGLTVLGTRYRCPVGIAPSAMQKLAHADGEVATARAAGMMDAIMILSLMSTT 60
           +R++   D+  T+ G     P+ I+P+A   +A  DGE +TARAA   +   ++S  ++ 
Sbjct: 51  LRDMSKVDTRTTIQGQEISAPICISPTAFHSIAWPDGEKSTARAAQEANICYVISSYASY 110

Query: 61  SLEEVRAQNPSTTLWLQMYIFKDRALSLQMVQRAERSGYSAIVITMDTAVLGSRYHISK- 119
           SLE++ A  P    W Q+Y+  D   + QMVQRAE  G+ A+VIT+DT VLG+R    + 
Sbjct: 111 SLEDIVAAAPEGFRWFQLYMKSDWDFNKQMVQRAEALGFKALVITIDTPVLGNRRRDKRN 170

Query: 120 ---------FRDISAEECSSGLTDYVANQFDDSVDWDDVRSLVQATKLPIVCKDSLQQ 168
                     +D+ A +          +    S  W+D+  L   T+LPI+ K  L +
Sbjct: 171 QLNLEANILLKDLRALKEEKPTQSVPVSFPKASFCWNDLSLLQSITRLPIILKGILTK 228


>pdb|3SGZ|A Chain A, High Resolution Crystal Structure Of Rat Long Chain
           Hydroxy Acid Oxidase In Complex With The Inhibitor
           4-Carboxy-5-[(4-Chiorophenyl) Sulfanyl]-1, 2,
           3-Thiadiazole.
 pdb|3SGZ|B Chain B, High Resolution Crystal Structure Of Rat Long Chain
           Hydroxy Acid Oxidase In Complex With The Inhibitor
           4-Carboxy-5-[(4-Chiorophenyl) Sulfanyl]-1, 2,
           3-Thiadiazole.
 pdb|3SGZ|C Chain C, High Resolution Crystal Structure Of Rat Long Chain
           Hydroxy Acid Oxidase In Complex With The Inhibitor
           4-Carboxy-5-[(4-Chiorophenyl) Sulfanyl]-1, 2,
           3-Thiadiazole
          Length = 352

 Score = 91.7 bits (226), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 58/178 (32%), Positives = 93/178 (52%), Gaps = 10/178 (5%)

Query: 1   MRNVCDRDSGLTVLGTRYRCPVGIAPSAMQKLAHADGEVATARAAGMMDAIMILSLMSTT 60
           +R++   D+  T+ G     P+ I+P+A   +A  DGE +TARAA   +   ++S  ++ 
Sbjct: 51  LRDMSKVDTRTTIQGQEISAPICISPTAFHSIAWPDGEKSTARAAQEANICYVISSYASY 110

Query: 61  SLEEVRAQNPSTTLWLQMYIFKDRALSLQMVQRAERSGYSAIVITMDTAVLGSRYHISKF 120
           SLE++ A  P    W Q+Y+  D   + QMVQRAE  G+ A+VIT+DT VLG+R    + 
Sbjct: 111 SLEDIVAAAPEGFRWFQLYMKSDWDFNKQMVQRAEALGFKALVITIDTPVLGNRRRDKRN 170

Query: 121 R-DISAEECSSGLTDYVANQFDDSVD---------WDDVRSLVQATKLPIVCKDSLQQ 168
           + ++ A    + L      +   SV          W+D+  L   T+LPI+ K  L +
Sbjct: 171 QLNLEANILKAALRALKEEKPTQSVPVLFPKASFCWNDLSLLQSITRLPIILKGILTK 228


>pdb|2CDH|0 Chain 0, Architecture Of The Thermomyces Lanuginosus Fungal Fatty
           Acid Synthase At 5 Angstrom Resolution.
 pdb|2CDH|1 Chain 1, Architecture Of The Thermomyces Lanuginosus Fungal Fatty
           Acid Synthase At 5 Angstrom Resolution.
 pdb|2CDH|2 Chain 2, Architecture Of The Thermomyces Lanuginosus Fungal Fatty
           Acid Synthase At 5 Angstrom Resolution.
 pdb|2CDH|3 Chain 3, Architecture Of The Thermomyces Lanuginosus Fungal Fatty
           Acid Synthase At 5 Angstrom Resolution.
 pdb|2CDH|Y Chain Y, Architecture Of The Thermomyces Lanuginosus Fungal Fatty
           Acid Synthase At 5 Angstrom Resolution.
 pdb|2CDH|Z Chain Z, Architecture Of The Thermomyces Lanuginosus Fungal Fatty
           Acid Synthase At 5 Angstrom Resolution
          Length = 226

 Score = 85.5 bits (210), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 46/95 (48%), Positives = 67/95 (70%), Gaps = 1/95 (1%)

Query: 12  TVLGTRYRCPVGIAPSAMQKLAHADGEVATARAAGMMDAIMILSLMSTTSLEEVRAQNPS 71
           T+LG +   P+ IAP+AMQK+AH +GE ATARAA     IM LS  +T+S+EEV +  P 
Sbjct: 3   TILGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWATSSVEEVASTGPG 62

Query: 72  TTLWLQMYIFKDRALSLQMVQRAERSGYSAIVITM 106
              + Q+Y++KDR +  Q+V+RAER+G+ AI +T+
Sbjct: 63  IR-FFQLYVYKDRNVVAQLVRRAERAGFKAIALTV 96


>pdb|1LDC|A Chain A, X-Ray Structure Of Two Complexes Of The Y143f
           Flavocytochrome B2 Mutant Crystallized In The Presence
           Of Lactate Or Phenyl-Lactate
 pdb|1LDC|B Chain B, X-Ray Structure Of Two Complexes Of The Y143f
           Flavocytochrome B2 Mutant Crystallized In The Presence
           Of Lactate Or Phenyl-Lactate
 pdb|1LCO|A Chain A, X-Ray Structure Of Two Complexes Of The Y143f
           Flavocytochrome B2 Mutant Crystallized In The Presence
           Of Lactate Or Phenyl-Lactate
 pdb|1LCO|B Chain B, X-Ray Structure Of Two Complexes Of The Y143f
           Flavocytochrome B2 Mutant Crystallized In The Presence
           Of Lactate Or Phenyl-Lactate
          Length = 511

 Score = 69.7 bits (169), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 48/172 (27%), Positives = 82/172 (47%), Gaps = 16/172 (9%)

Query: 8   DSGLTVLGTRYRCPVGIAPSAMQKLAHA-DGEVATARA--AGMMDAIMILSLMSTTSLEE 64
           D    +LG+    P  ++ +A+ KL +  +GE   AR    G+     ++S +++ S EE
Sbjct: 178 DISTDMLGSHVDVPFYVSATALCKLGNPLEGEKDVARGCGQGVTKVPQMISTLASCSPEE 237

Query: 65  VRAQNPSTTL--WLQMYIFKDRALSLQMVQRAERSGYSAIVITMDTAVLGSRYHISKFRD 122
           +    PS     W Q+Y+  DR ++  +V+  E+ G  A+ +T+D   LG R    K + 
Sbjct: 238 IIEAAPSDKQIQWYQLYVNSDRKITDDLVKNVEKLGVKALFVTVDAPSLGQREKDMKLKF 297

Query: 123 ISAE-----------ECSSGLTDYVANQFDDSVDWDDVRSLVQATKLPIVCK 163
            + +           E S G +  ++   D S+ W D+  L + TKLPIV K
Sbjct: 298 SNTKAGPKAMKKTNVEESQGASRALSKFIDPSLTWKDIEELKKKTKLPIVIK 349


>pdb|1FCB|A Chain A, Molecular Structure Of Flavocytochrome B2 At 2.4 Angstroms
           Resolution
 pdb|1FCB|B Chain B, Molecular Structure Of Flavocytochrome B2 At 2.4 Angstroms
           Resolution
 pdb|1KBI|A Chain A, Crystallographic Study Of The Recombinant Flavin-Binding
           Domain Of Baker's Yeast Flavocytochrome B2: Comparison
           With The Intact Wild- Type Enzyme
 pdb|1KBI|B Chain B, Crystallographic Study Of The Recombinant Flavin-Binding
           Domain Of Baker's Yeast Flavocytochrome B2: Comparison
           With The Intact Wild- Type Enzyme
          Length = 511

 Score = 69.7 bits (169), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 50/172 (29%), Positives = 82/172 (47%), Gaps = 16/172 (9%)

Query: 8   DSGLTVLGTRYRCPVGIAPSAMQKLAHA-DGEVATARA--AGMMDAIMILSLMSTTSLEE 64
           D    +LG+    P  ++ +A+ KL +  +GE   AR    G+     ++S +++ S EE
Sbjct: 178 DISTDMLGSHVDVPFYVSATALCKLGNPLEGEKDVARGCGQGVTKVPQMISTLASCSPEE 237

Query: 65  VRAQNPSTTL--WLQMYIFKDRALSLQMVQRAERSGYSAIVITMDTAVLGSRYHIS--KF 120
           +    PS     W Q+Y+  DR ++  +V+  E+ G  A+ +T+D   LG R      KF
Sbjct: 238 IIEAAPSDKQIQWYQLYVNSDRKITDDLVKNVEKLGVKALFVTVDAPSLGQREKDMKLKF 297

Query: 121 RDISAE---------ECSSGLTDYVANQFDDSVDWDDVRSLVQATKLPIVCK 163
            +  A          E S G +  ++   D S+ W D+  L + TKLPIV K
Sbjct: 298 SNTKAGPKAMKKTNVEESQGASRALSKFIDPSLTWKDIEELKKKTKLPIVIK 349


>pdb|2OZ0|A Chain A, Mechanistic And Structural Studies Of H373q
           Flavocytochrome B2: Effects Of Mutating The Active Site
           Base
 pdb|2OZ0|B Chain B, Mechanistic And Structural Studies Of H373q
           Flavocytochrome B2: Effects Of Mutating The Active Site
           Base
          Length = 511

 Score = 69.7 bits (169), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 48/172 (27%), Positives = 82/172 (47%), Gaps = 16/172 (9%)

Query: 8   DSGLTVLGTRYRCPVGIAPSAMQKLAHA-DGEVATARA--AGMMDAIMILSLMSTTSLEE 64
           D    +LG+    P  ++ +A+ KL +  +GE   AR    G+     ++S +++ S EE
Sbjct: 178 DISTDMLGSHVDVPFYVSATALCKLGNPLEGEKDVARGCGQGVTKVPQMISTLASCSPEE 237

Query: 65  VRAQNPSTTL--WLQMYIFKDRALSLQMVQRAERSGYSAIVITMDTAVLGSRYHISKFRD 122
           +    PS     W Q+Y+  DR ++  +V+  E+ G  A+ +T+D   LG R    K + 
Sbjct: 238 IIEAAPSDKQIQWYQLYVNSDRKITDDLVKNVEKLGVKALFVTVDAPSLGQREKDMKLKF 297

Query: 123 ISAE-----------ECSSGLTDYVANQFDDSVDWDDVRSLVQATKLPIVCK 163
            + +           E S G +  ++   D S+ W D+  L + TKLPIV K
Sbjct: 298 SNTKAGPKAMKKTNVEESQGASRALSKFIDPSLTWKDIEELKKKTKLPIVIK 349


>pdb|1LTD|A Chain A, The 2.6 Angstroms Refined Structure Of The Escherichia
           Coli Recombinant Saccharomyces Cerevisiae
           Flavocytochrome B2-Sulphite Complex
 pdb|1LTD|B Chain B, The 2.6 Angstroms Refined Structure Of The Escherichia
           Coli Recombinant Saccharomyces Cerevisiae
           Flavocytochrome B2-Sulphite Complex
          Length = 506

 Score = 69.3 bits (168), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 48/172 (27%), Positives = 82/172 (47%), Gaps = 16/172 (9%)

Query: 8   DSGLTVLGTRYRCPVGIAPSAMQKLAHA-DGEVATARA--AGMMDAIMILSLMSTTSLEE 64
           D    +LG+    P  ++ +A+ KL +  +GE   AR    G+     ++S +++ S EE
Sbjct: 173 DISTDMLGSHVDVPFYVSATALCKLGNPLEGEKDVARGCGQGVTKVPQMISTLASCSPEE 232

Query: 65  VRAQNPSTTL--WLQMYIFKDRALSLQMVQRAERSGYSAIVITMDTAVLGSRYHISKFRD 122
           +    PS     W Q+Y+  DR ++  +V+  E+ G  A+ +T+D   LG R    K + 
Sbjct: 233 IIEAAPSDKQIQWYQLYVNSDRKITDDLVKNVEKLGVKALFVTVDAPSLGQREKDMKLKF 292

Query: 123 ISAE-----------ECSSGLTDYVANQFDDSVDWDDVRSLVQATKLPIVCK 163
            + +           E S G +  ++   D S+ W D+  L + TKLPIV K
Sbjct: 293 SNTKAGPKAMKKTNVEESQGASRALSKFIDPSLTWKDIEELKKKTKLPIVIK 344


>pdb|1SZE|A Chain A, L230a Mutant Flavocytochrome B2 With Benzoylformate
 pdb|1SZE|B Chain B, L230a Mutant Flavocytochrome B2 With Benzoylformate
          Length = 511

 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 48/172 (27%), Positives = 81/172 (47%), Gaps = 16/172 (9%)

Query: 8   DSGLTVLGTRYRCPVGIAPSAMQKLAHA-DGEVATARA--AGMMDAIMILSLMSTTSLEE 64
           D    +LG+    P  ++ +A+ KL +  +GE   AR    G+     ++S  ++ S EE
Sbjct: 178 DISTDMLGSHVDVPFYVSATALCKLGNPLEGEKDVARGCGQGVTKVPQMISTAASCSPEE 237

Query: 65  VRAQNPSTTL--WLQMYIFKDRALSLQMVQRAERSGYSAIVITMDTAVLGSRYHISKFRD 122
           +    PS     W Q+Y+  DR ++  +V+  E+ G  A+ +T+D   LG R    K + 
Sbjct: 238 IIEAAPSDKQIQWYQLYVNSDRKITDDLVKNVEKLGVKALFVTVDAPSLGQREKDMKLKF 297

Query: 123 ISAE-----------ECSSGLTDYVANQFDDSVDWDDVRSLVQATKLPIVCK 163
            + +           E S G +  ++   D S+ W D+  L + TKLPIV K
Sbjct: 298 SNTKAGPKAMKKTNVEESQGASRALSKFIDPSLTWKDIEELKKKTKLPIVIK 349


>pdb|1KBJ|A Chain A, Crystallographic Study Of The Recombinant Flavin-Binding
           Domain Of Baker's Yeast Flavocytochrome B2: Comparison
           With The Intact Wild- Type Enzyme
 pdb|1KBJ|B Chain B, Crystallographic Study Of The Recombinant Flavin-Binding
           Domain Of Baker's Yeast Flavocytochrome B2: Comparison
           With The Intact Wild- Type Enzyme
          Length = 412

 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 50/172 (29%), Positives = 82/172 (47%), Gaps = 16/172 (9%)

Query: 8   DSGLTVLGTRYRCPVGIAPSAMQKLAHA-DGEVATARA--AGMMDAIMILSLMSTTSLEE 64
           D    +LG+    P  ++ +A+ KL +  +GE   AR    G+     ++S +++ S EE
Sbjct: 79  DISTDMLGSHVDVPFYVSATALCKLGNPLEGEKDVARGCGQGVTKVPQMISTLASCSPEE 138

Query: 65  VRAQNPSTTL--WLQMYIFKDRALSLQMVQRAERSGYSAIVITMDTAVLGSRYHIS--KF 120
           +    PS     W Q+Y+  DR ++  +V+  E+ G  A+ +T+D   LG R      KF
Sbjct: 139 IIEAAPSDKQIQWYQLYVNSDRKITDDLVKNVEKLGVKALFVTVDAPSLGQREKDMKLKF 198

Query: 121 RDISAE---------ECSSGLTDYVANQFDDSVDWDDVRSLVQATKLPIVCK 163
            +  A          E S G +  ++   D S+ W D+  L + TKLPIV K
Sbjct: 199 SNTKAGPKAMKKTNVEESQGASRALSKFIDPSLTWKDIEELKKKTKLPIVIK 250


>pdb|2J6X|A Chain A, The Crystal Structure Of Lactate Oxidase
 pdb|2J6X|B Chain B, The Crystal Structure Of Lactate Oxidase
 pdb|2J6X|C Chain C, The Crystal Structure Of Lactate Oxidase
 pdb|2J6X|D Chain D, The Crystal Structure Of Lactate Oxidase
 pdb|2J6X|E Chain E, The Crystal Structure Of Lactate Oxidase
 pdb|2J6X|F Chain F, The Crystal Structure Of Lactate Oxidase
 pdb|2J6X|G Chain G, The Crystal Structure Of Lactate Oxidase
 pdb|2J6X|H Chain H, The Crystal Structure Of Lactate Oxidase
          Length = 374

 Score = 67.8 bits (164), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 57/113 (50%)

Query: 2   RNVCDRDSGLTVLGTRYRCPVGIAPSAMQKLAHADGEVATARAAGMMDAIMILSLMSTTS 61
           ++V   D+   +LG + + P  +AP A   LAH   E  TARA      IM +S  S  +
Sbjct: 69  QDVEAPDTSTEILGHKIKAPFIMAPIAAHGLAHTTKEAGTARAVSEFGTIMSISAYSGAT 128

Query: 62  LEEVRAQNPSTTLWLQMYIFKDRALSLQMVQRAERSGYSAIVITMDTAVLGSR 114
            EE+         W Q+Y+ KD   +  ++  A+  G +AI++T D+ V G+R
Sbjct: 129 FEEISEGLNGGPRWFQIYMAKDDQQNRDILDEAKSDGATAIILTADSTVSGNR 181


>pdb|2DU2|A Chain A, Crystal Structure Analysis Of The L-Lactate Oxidase
 pdb|2DU2|B Chain B, Crystal Structure Analysis Of The L-Lactate Oxidase
 pdb|2DU2|C Chain C, Crystal Structure Analysis Of The L-Lactate Oxidase
 pdb|2DU2|D Chain D, Crystal Structure Analysis Of The L-Lactate Oxidase
 pdb|2E77|A Chain A, Crystal Structure Of L-Lactate Oxidase With Pyruvate
           Complex
 pdb|2E77|B Chain B, Crystal Structure Of L-Lactate Oxidase With Pyruvate
           Complex
 pdb|2E77|C Chain C, Crystal Structure Of L-Lactate Oxidase With Pyruvate
           Complex
 pdb|2E77|D Chain D, Crystal Structure Of L-Lactate Oxidase With Pyruvate
           Complex
 pdb|2ZFA|A Chain A, Structure Of Lactate Oxidase At Ph4.5 From Aerococcus
           Viridans
 pdb|2ZFA|B Chain B, Structure Of Lactate Oxidase At Ph4.5 From Aerococcus
           Viridans
          Length = 374

 Score = 67.8 bits (164), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 57/113 (50%)

Query: 2   RNVCDRDSGLTVLGTRYRCPVGIAPSAMQKLAHADGEVATARAAGMMDAIMILSLMSTTS 61
           ++V   D+   +LG + + P  +AP A   LAH   E  TARA      IM +S  S  +
Sbjct: 69  QDVEAPDTSTEILGHKIKAPFIMAPIAAHGLAHTTKEAGTARAVSEFGTIMSISAYSGAT 128

Query: 62  LEEVRAQNPSTTLWLQMYIFKDRALSLQMVQRAERSGYSAIVITMDTAVLGSR 114
            EE+         W Q+Y+ KD   +  ++  A+  G +AI++T D+ V G+R
Sbjct: 129 FEEISEGLNGGPRWFQIYMAKDDQQNRDILDEAKSDGATAIILTADSTVSGNR 181


>pdb|2NLI|A Chain A, Crystal Structure Of The Complex Between L-Lactate Oxidase
           And A Substrate Analogue At 1.59 Angstrom Resolution
 pdb|2NLI|B Chain B, Crystal Structure Of The Complex Between L-Lactate Oxidase
           And A Substrate Analogue At 1.59 Angstrom Resolution
          Length = 368

 Score = 67.8 bits (164), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 57/113 (50%)

Query: 2   RNVCDRDSGLTVLGTRYRCPVGIAPSAMQKLAHADGEVATARAAGMMDAIMILSLMSTTS 61
           ++V   D+   +LG + + P  +AP A   LAH   E  TARA      IM +S  S  +
Sbjct: 63  QDVEAPDTSTEILGHKIKAPFIMAPIAAHGLAHTTKEAGTARAVSEFGTIMSISAYSGAT 122

Query: 62  LEEVRAQNPSTTLWLQMYIFKDRALSLQMVQRAERSGYSAIVITMDTAVLGSR 114
            EE+         W Q+Y+ KD   +  ++  A+  G +AI++T D+ V G+R
Sbjct: 123 FEEISEGLNGGPRWFQIYMAKDDQQNRDILDEAKSDGATAIILTADSTVSGNR 175


>pdb|1QCW|A Chain A, Flavocytochrome B2, Arg289lys Mutant
 pdb|1QCW|B Chain B, Flavocytochrome B2, Arg289lys Mutant
          Length = 410

 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 49/172 (28%), Positives = 82/172 (47%), Gaps = 16/172 (9%)

Query: 8   DSGLTVLGTRYRCPVGIAPSAMQKLAHA-DGEVATARA--AGMMDAIMILSLMSTTSLEE 64
           D    +LG+    P  ++ +A+ KL +  +GE   AR    G+     ++S +++ S EE
Sbjct: 77  DISTDMLGSHVDVPFYVSATALCKLGNPLEGEKDVARGCGQGVTKVPQMISTLASCSPEE 136

Query: 65  VRAQNPSTTL--WLQMYIFKDRALSLQMVQRAERSGYSAIVITMDTAVLGSRYHIS--KF 120
           +    PS     W Q+Y+  DR ++  +V+  E+ G  A+ +T+D   LG +      KF
Sbjct: 137 IIEAAPSDKQIQWYQLYVNSDRKITDDLVKNVEKLGVKALFVTVDAPSLGQKEKDMKLKF 196

Query: 121 RDISAE---------ECSSGLTDYVANQFDDSVDWDDVRSLVQATKLPIVCK 163
            +  A          E S G +  ++   D S+ W D+  L + TKLPIV K
Sbjct: 197 SNTKAGFKAMKKTNVEESQGASRALSKFIDPSLTWKDIEELKKKTKLPIVIK 248


>pdb|1SZF|A Chain A, A198g:l230a Mutant Flavocytochrome B2 With Pyruvate Bound
 pdb|1SZF|B Chain B, A198g:l230a Mutant Flavocytochrome B2 With Pyruvate Bound
 pdb|1SZG|A Chain A, A198g:l230a Flavocytochrome B2 With Sulfite Bound
 pdb|1SZG|B Chain B, A198g:l230a Flavocytochrome B2 With Sulfite Bound
          Length = 511

 Score = 67.0 bits (162), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 47/172 (27%), Positives = 80/172 (46%), Gaps = 16/172 (9%)

Query: 8   DSGLTVLGTRYRCPVGIAPSAMQKLAHA-DGEVATARA--AGMMDAIMILSLMSTTSLEE 64
           D    +LG+    P  ++ + + KL +  +GE   AR    G+     ++S  ++ S EE
Sbjct: 178 DISTDMLGSHVDVPFYVSATGLCKLGNPLEGEKDVARGCGQGVTKVPQMISTAASCSPEE 237

Query: 65  VRAQNPSTTL--WLQMYIFKDRALSLQMVQRAERSGYSAIVITMDTAVLGSRYHISKFRD 122
           +    PS     W Q+Y+  DR ++  +V+  E+ G  A+ +T+D   LG R    K + 
Sbjct: 238 IIEAAPSDKQIQWYQLYVNSDRKITDDLVKNVEKLGVKALFVTVDAPSLGQREKDMKLKF 297

Query: 123 ISAE-----------ECSSGLTDYVANQFDDSVDWDDVRSLVQATKLPIVCK 163
            + +           E S G +  ++   D S+ W D+  L + TKLPIV K
Sbjct: 298 SNTKAGPKAMKKTNVEESQGASRALSKFIDPSLTWKDIEELKKKTKLPIVIK 349


>pdb|2A7N|A Chain A, Crystal Structure Of The G81a Mutant Of The Active Chimera
           Of (S)- Mandelate Dehydrogenase
 pdb|2A7P|A Chain A, Crystal Structure Of The G81a Mutant Of The Active Chimera
           Of (S)- Mandelate Dehydrogenase In Complex With Its
           Substrate 3-Indolelactate
 pdb|2A85|A Chain A, Crystal Structure Of The G81a Mutant Of The Active Chimera
           Of (S)- Mandelate Dehydrogenase In Complex With Its
           Substrate 2- Hydroxyoctanoate
 pdb|3GIY|A Chain A, Crystal Structures Of The G81a Mutant Of The Active
           Chimera Of (S)-Mandelate Dehydrogenase And Its Complex
           With Two Of Its Substrates
          Length = 380

 Score = 61.6 bits (148), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 78/167 (46%), Gaps = 19/167 (11%)

Query: 3   NVCDRDSGLTVLGTRYRCPVGIAPSAMQKLAHADGEVATARAAGMMDAIMILSLMSTTSL 62
           +V  R     VLG R   P+ I P+A+       G++A ARAA       +LS  S  S+
Sbjct: 56  DVSRRSLQAEVLGKRQSMPLLIGPTALNGALWPKGDLALARAATKAGIPFVLSTASNMSI 115

Query: 63  EEVRAQNPSTTLWLQMYIFKDRALSLQMVQRAERSGYSAIVITMDTAVLG-------SRY 115
           E++ A+     LW Q+Y+   R ++  MV +A  +GY+ +V+T D AV G       +R+
Sbjct: 116 EDL-ARQCDGDLWFQLYVIH-REIAQGMVLKALHTGYTTLVLTTDVAVNGYRERDLHNRF 173

Query: 116 HISKFRDISA-EECSSGLTD---------YVANQFDDSVDWDDVRSL 152
            I  F  +   E    G  D          ++ Q D S +W+ +R L
Sbjct: 174 KIPPFLTLKNFEGIDLGKMDKANLEMQAALMSRQMDASFNWEALRWL 220


>pdb|1HUV|A Chain A, Crystal Structure Of A Soluble Mutant Of The
           Membrane-Associated (S)- Mandelate Dehydrogenase From
           Pseudomonas Putida At 2.15a Resolution
 pdb|1P4C|A Chain A, High Resolution Structure Of Oxidized Active Mutant Of
           (S)- Mandelate Dehydrogenase
 pdb|1P5B|A Chain A, High Resolution Structure Of Reduced Active Mutant Of
           (S)-Mandelate Dehydrogenase
          Length = 380

 Score = 60.5 bits (145), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 77/167 (46%), Gaps = 19/167 (11%)

Query: 3   NVCDRDSGLTVLGTRYRCPVGIAPSAMQKLAHADGEVATARAAGMMDAIMILSLMSTTSL 62
           +V  R     VLG R   P+ I P+ +       G++A ARAA       +LS  S  S+
Sbjct: 56  DVSRRSLQAEVLGKRQSMPLLIGPTGLNGALWPKGDLALARAATKAGIPFVLSTASNMSI 115

Query: 63  EEVRAQNPSTTLWLQMYIFKDRALSLQMVQRAERSGYSAIVITMDTAVLG-------SRY 115
           E++ A+     LW Q+Y+   R ++  MV +A  +GY+ +V+T D AV G       +R+
Sbjct: 116 EDL-ARQCDGDLWFQLYVIH-REIAQGMVLKALHTGYTTLVLTTDVAVNGYRERDLHNRF 173

Query: 116 HISKFRDISA-EECSSGLTD---------YVANQFDDSVDWDDVRSL 152
            I  F  +   E    G  D          ++ Q D S +W+ +R L
Sbjct: 174 KIPPFLTLKNFEGIDLGKMDKANLEMQAALMSRQMDASFNWEALRWL 220


>pdb|2FUK|A Chain A, Crystal Structure Of Xc6422 From Xanthomonas Campestris: A
           Member Of AB SERINE HYDROLASE WITHOUT LID AT 1.6
           Resolution
          Length = 220

 Score = 32.0 bits (71), Expect = 1.6,   Method: Composition-based stats.
 Identities = 24/75 (32%), Positives = 32/75 (42%), Gaps = 20/75 (26%)

Query: 7   RDSGLTVLGTRYRCPVGIAPSAMQKLAHADGEVATARAAGMMDAIMILSLMSTTSLEEVR 66
           R+ G+TV+   +R  VG +  +     H DGE    RA                  E VR
Sbjct: 66  RELGITVVRFNFR-SVGTSAGSFD---HGDGEQDDLRAVA----------------EWVR 105

Query: 67  AQNPSTTLWLQMYIF 81
           AQ P+ TLWL  + F
Sbjct: 106 AQRPTDTLWLAGFSF 120


>pdb|1YVF|A Chain A, Hepatitis C Virus Ns5b Rna-Dependent Rna Polymerase
           Complex With Inhibitor Pha-00729145
 pdb|1Z4U|A Chain A, Hepatitis C Virus Ns5b Rna-Dependent Rna Polymerase
           Complex With Inhibitor Pha-00799585
          Length = 577

 Score = 29.6 bits (65), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 21/92 (22%)

Query: 91  VQRAERSGYSAIVITMDTAVLGSRY---HISKFR------DISAEECSSGLTDYVANQFD 141
           V+  E+     +V T+  AV+GS Y   +  K R         A++C  G + Y    FD
Sbjct: 168 VRVCEKMALYDVVSTLPQAVMGSSYGFQYSPKQRVEFLVNTWKAKKCPMGFS-YDTRCFD 226

Query: 142 DSVDWDDVRSLVQATKLPIVCKDSLQQCCDLS 173
            +V  +D+R            ++S+ QCCDL+
Sbjct: 227 STVTENDIR-----------VEESIYQCCDLA 247


  Database: pdbaa
    Posted date:  Mar 3, 2013 10:34 PM
  Number of letters in database: 14,973,337
  Number of sequences in database:  62,578
  
Lambda     K      H
   0.325    0.138    0.426 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,075,593
Number of Sequences: 62578
Number of extensions: 1008951
Number of successful extensions: 2722
Number of sequences better than 100.0: 29
Number of HSP's better than 100.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 2672
Number of HSP's gapped (non-prelim): 30
length of query: 873
length of database: 14,973,337
effective HSP length: 107
effective length of query: 766
effective length of database: 8,277,491
effective search space: 6340558106
effective search space used: 6340558106
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 56 (26.2 bits)