BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy7099
(75 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q299G2|CYFIP_DROPS Cytoplasmic FMR1-interacting protein OS=Drosophila pseudoobscura
pseudoobscura GN=Sra-1 PE=3 SV=1
Length = 1291
Score = 117 bits (292), Expect = 2e-26, Method: Composition-based stats.
Identities = 56/73 (76%), Positives = 62/73 (84%), Gaps = 1/73 (1%)
Query: 3 KFLGFVGAYHFRAMCRLLGYQGIAVVMEELLK-IVTSLIQGSLLQFTKTLMDAMPKQCKL 61
++ GFVG+ HF AMCRLLGYQGIAVVM+ +LK IV LIQGSLLQFTKTLM AMPK CKL
Sbjct: 925 QYTGFVGSPHFHAMCRLLGYQGIAVVMDIILKDIVKPLIQGSLLQFTKTLMIAMPKSCKL 984
Query: 62 PRYDYGSPGVLGY 74
PR +YGSPGVL Y
Sbjct: 985 PRCEYGSPGVLSY 997
>sp|Q9VF87|CYFIP_DROME Cytoplasmic FMR1-interacting protein OS=Drosophila melanogaster
GN=Sra-1 PE=1 SV=1
Length = 1291
Score = 117 bits (292), Expect = 2e-26, Method: Composition-based stats.
Identities = 56/73 (76%), Positives = 62/73 (84%), Gaps = 1/73 (1%)
Query: 3 KFLGFVGAYHFRAMCRLLGYQGIAVVMEELLK-IVTSLIQGSLLQFTKTLMDAMPKQCKL 61
++ GFVG+ HF AMCRLLGYQGIAVVM+ +LK IV LIQGSLLQFTKTLM AMPK CKL
Sbjct: 925 QYTGFVGSPHFHAMCRLLGYQGIAVVMDIILKDIVKPLIQGSLLQFTKTLMIAMPKSCKL 984
Query: 62 PRYDYGSPGVLGY 74
PR +YGSPGVL Y
Sbjct: 985 PRCEYGSPGVLSY 997
>sp|Q7TMB8|CYFP1_MOUSE Cytoplasmic FMR1-interacting protein 1 OS=Mus musculus GN=Cyfip1
PE=1 SV=1
Length = 1253
Score = 111 bits (277), Expect = 2e-24, Method: Composition-based stats.
Identities = 47/71 (66%), Positives = 61/71 (85%)
Query: 4 FLGFVGAYHFRAMCRLLGYQGIAVVMEELLKIVTSLIQGSLLQFTKTLMDAMPKQCKLPR 63
+ FVG HF+ +CRLLGYQGIAVVMEELLK+V SL+QG++LQ+ KTLM+ MPK C+LPR
Sbjct: 905 YRNFVGPPHFQVICRLLGYQGIAVVMEELLKVVKSLLQGTILQYVKTLMEVMPKICRLPR 964
Query: 64 YDYGSPGVLGY 74
++YGSPG+L +
Sbjct: 965 HEYGSPGILEF 975
>sp|Q7L576|CYFP1_HUMAN Cytoplasmic FMR1-interacting protein 1 OS=Homo sapiens GN=CYFIP1
PE=1 SV=1
Length = 1253
Score = 110 bits (276), Expect = 2e-24, Method: Composition-based stats.
Identities = 47/71 (66%), Positives = 61/71 (85%)
Query: 4 FLGFVGAYHFRAMCRLLGYQGIAVVMEELLKIVTSLIQGSLLQFTKTLMDAMPKQCKLPR 63
+ FVG HF+ +CRLLGYQGIAVVMEELLK+V SL+QG++LQ+ KTLM+ MPK C+LPR
Sbjct: 905 YRNFVGPPHFQVICRLLGYQGIAVVMEELLKVVKSLLQGTILQYVKTLMEVMPKICRLPR 964
Query: 64 YDYGSPGVLGY 74
++YGSPG+L +
Sbjct: 965 HEYGSPGILEF 975
>sp|Q90YM8|CYFP1_DANRE Cytoplasmic FMR1-interacting protein 1 homolog OS=Danio rerio
GN=cyfip1 PE=2 SV=1
Length = 1253
Score = 110 bits (276), Expect = 2e-24, Method: Composition-based stats.
Identities = 47/71 (66%), Positives = 61/71 (85%)
Query: 4 FLGFVGAYHFRAMCRLLGYQGIAVVMEELLKIVTSLIQGSLLQFTKTLMDAMPKQCKLPR 63
+ FVG H +A+CRLLGYQGIAVVMEELLK+V SL+QG++LQ+ KTLM+ MPK C+LPR
Sbjct: 905 YRNFVGPPHIKAICRLLGYQGIAVVMEELLKVVKSLLQGTILQYVKTLMEVMPKICRLPR 964
Query: 64 YDYGSPGVLGY 74
++YGSPG+L +
Sbjct: 965 HEYGSPGILEF 975
>sp|Q5SQX6|CYFP2_MOUSE Cytoplasmic FMR1-interacting protein 2 OS=Mus musculus GN=Cyfip2
PE=1 SV=2
Length = 1253
Score = 110 bits (275), Expect = 2e-24, Method: Composition-based stats.
Identities = 47/71 (66%), Positives = 61/71 (85%)
Query: 4 FLGFVGAYHFRAMCRLLGYQGIAVVMEELLKIVTSLIQGSLLQFTKTLMDAMPKQCKLPR 63
+ FVG HF+ +CRLLGYQGIAVVMEELLKIV SL+QG++LQ+ KTL++ MPK C+LPR
Sbjct: 904 YRNFVGPPHFKTICRLLGYQGIAVVMEELLKIVKSLLQGTILQYVKTLIEVMPKICRLPR 963
Query: 64 YDYGSPGVLGY 74
++YGSPG+L +
Sbjct: 964 HEYGSPGILEF 974
>sp|Q5R414|CYFP2_PONAB Cytoplasmic FMR1-interacting protein 2 OS=Pongo abelii GN=CYFIP2
PE=2 SV=1
Length = 1253
Score = 110 bits (275), Expect = 2e-24, Method: Composition-based stats.
Identities = 47/71 (66%), Positives = 61/71 (85%)
Query: 4 FLGFVGAYHFRAMCRLLGYQGIAVVMEELLKIVTSLIQGSLLQFTKTLMDAMPKQCKLPR 63
+ FVG HF+ +CRLLGYQGIAVVMEELLKIV SL+QG++LQ+ KTL++ MPK C+LPR
Sbjct: 904 YRNFVGPPHFKTICRLLGYQGIAVVMEELLKIVESLLQGTILQYVKTLIEVMPKICRLPR 963
Query: 64 YDYGSPGVLGY 74
++YGSPG+L +
Sbjct: 964 HEYGSPGILEF 974
>sp|Q96F07|CYFP2_HUMAN Cytoplasmic FMR1-interacting protein 2 OS=Homo sapiens GN=CYFIP2
PE=1 SV=2
Length = 1278
Score = 110 bits (275), Expect = 3e-24, Method: Composition-based stats.
Identities = 47/71 (66%), Positives = 61/71 (85%)
Query: 4 FLGFVGAYHFRAMCRLLGYQGIAVVMEELLKIVTSLIQGSLLQFTKTLMDAMPKQCKLPR 63
+ FVG HF+ +CRLLGYQGIAVVMEELLKIV SL+QG++LQ+ KTL++ MPK C+LPR
Sbjct: 929 YRNFVGPPHFKTICRLLGYQGIAVVMEELLKIVKSLLQGTILQYVKTLIEVMPKICRLPR 988
Query: 64 YDYGSPGVLGY 74
++YGSPG+L +
Sbjct: 989 HEYGSPGILEF 999
>sp|Q6GQD1|CYFP2_XENLA Cytoplasmic FMR1-interacting protein 2 OS=Xenopus laevis GN=cyfip2
PE=2 SV=1
Length = 1253
Score = 110 bits (275), Expect = 3e-24, Method: Composition-based stats.
Identities = 47/71 (66%), Positives = 61/71 (85%)
Query: 4 FLGFVGAYHFRAMCRLLGYQGIAVVMEELLKIVTSLIQGSLLQFTKTLMDAMPKQCKLPR 63
+ FVG HF+ +CRLLGYQGIAVVMEELLKIV SL+QG++LQ+ KTL++ MPK C+LPR
Sbjct: 904 YRNFVGPPHFKTICRLLGYQGIAVVMEELLKIVKSLLQGTVLQYVKTLIEVMPKICRLPR 963
Query: 64 YDYGSPGVLGY 74
++YGSPG+L +
Sbjct: 964 HEYGSPGILEF 974
>sp|O44518|CYFIP_CAEEL Cytoplasmic FMR1-interacting protein homolog OS=Caenorhabditis
elegans GN=gex-2 PE=1 SV=4
Length = 1262
Score = 73.2 bits (178), Expect = 5e-13, Method: Composition-based stats.
Identities = 31/67 (46%), Positives = 45/67 (67%)
Query: 8 VGAYHFRAMCRLLGYQGIAVVMEELLKIVTSLIQGSLLQFTKTLMDAMPKQCKLPRYDYG 67
+G H +A+ RLL YQGIAV+++ELLK+ L+ + + + + + MPK CKLPR DYG
Sbjct: 912 IGTQHLKAITRLLHYQGIAVILDELLKMTNRLLNDKIRRHVRNVFNMMPKVCKLPRSDYG 971
Query: 68 SPGVLGY 74
S +L Y
Sbjct: 972 SNALLQY 978
>sp|Q6UK63|PIRA_DICDI Protein pirA OS=Dictyostelium discoideum GN=pirA PE=1 SV=1
Length = 1336
Score = 52.0 bits (123), Expect = 1e-06, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 40/71 (56%)
Query: 4 FLGFVGAYHFRAMCRLLGYQGIAVVMEELLKIVTSLIQGSLLQFTKTLMDAMPKQCKLPR 63
+ F+G H +++ R++G + + +++ E+L+ + I L + L+ MP KLP
Sbjct: 899 YKNFIGVPHIQSILRIVGKKNLPLIVAEVLRNIEIKITNVLSPYVSELLQGMPASTKLPI 958
Query: 64 YDYGSPGVLGY 74
YDYG+ G GY
Sbjct: 959 YDYGTEGGYGY 969
>sp|Q5S2C3|PIR_ARATH Protein PIR OS=Arabidopsis thaliana GN=PIR PE=1 SV=2
Length = 1282
Score = 31.6 bits (70), Expect = 1.6, Method: Composition-based stats.
Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 6 GFVGAYHFRAMCRLLGYQGIAVVMEELLKIVTSLIQGSLLQFTKTLMDAMPKQCKLPRYD 65
GF G H ++ +LLG + + ++ LL +++ I +L L +A+PK L +D
Sbjct: 916 GFFGIPHLFSIVKLLGSRSLPWLIRALLDHISNKIT-TLEPMISGLQEALPKSIGLLSFD 974
Query: 66 YGSPGVL 72
G G +
Sbjct: 975 GGVTGCM 981
>sp|Q9JUF4|HSCA_NEIMA Chaperone protein HscA homolog OS=Neisseria meningitidis serogroup
A / serotype 4A (strain Z2491) GN=hscA PE=3 SV=1
Length = 620
Score = 30.0 bits (66), Expect = 4.5, Method: Composition-based stats.
Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 8/64 (12%)
Query: 11 YHFRAMCRLLGYQGIAVVMEELLKIVTSLIQGSLLQFTK--------TLMDAMPKQCKLP 62
+ R CRLL G++ + E+ +++ SL++ + Q T TL D MP +
Sbjct: 241 FDHRLFCRLLEQNGLSQLNEQDSQLLLSLVRAAKEQLTTQTEARIQATLSDGMPIDTSIS 300
Query: 63 RYDY 66
R ++
Sbjct: 301 RAEF 304
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.330 0.145 0.441
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,974,019
Number of Sequences: 539616
Number of extensions: 778740
Number of successful extensions: 2057
Number of sequences better than 100.0: 13
Number of HSP's better than 100.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 2044
Number of HSP's gapped (non-prelim): 13
length of query: 75
length of database: 191,569,459
effective HSP length: 46
effective length of query: 29
effective length of database: 166,747,123
effective search space: 4835666567
effective search space used: 4835666567
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 55 (25.8 bits)