Query psy7099
Match_columns 75
No_of_seqs 47 out of 49
Neff 4.3
Searched_HMMs 13730
Date Fri Aug 16 18:07:55 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7099.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/7099hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1dlca3 f.1.3.1 (A:61-289) del 72.1 1.2 8.9E-05 29.4 2.7 45 6-52 18-69 (229)
2 d1veha_ d.52.8.1 (A:) HIRA-int 52.9 4 0.00029 23.9 2.2 21 30-50 12-32 (92)
3 d2a0ba_ a.24.10.1 (A:) Aerobic 48.6 14 0.001 20.7 4.2 43 6-49 66-115 (118)
4 d1i5pa3 f.1.3.1 (A:1-263) delt 33.1 13 0.00097 24.8 2.6 41 12-52 73-113 (263)
5 d1jjcb2 a.6.1.1 (B:400-474) Do 31.8 3.6 0.00027 22.8 -0.5 14 14-27 62-75 (75)
6 d2j8xa1 c.18.1.1 (A:26-255) Ur 27.9 12 0.00089 25.0 1.7 23 2-24 200-222 (230)
7 d2hxma1 c.18.1.1 (A:82-304) Ur 27.1 12 0.00085 25.0 1.4 23 2-24 192-214 (223)
8 d3euga_ c.18.1.1 (A:) Uracil-D 21.5 17 0.0013 24.1 1.4 23 2-24 188-210 (225)
9 d1xhja_ d.52.8.1 (A:) Nitrogen 19.3 34 0.0025 19.4 2.3 19 31-50 7-25 (88)
10 d2gm8a1 a.132.1.3 (A:2-212) Te 19.2 44 0.0032 20.0 2.9 27 28-54 1-28 (211)
No 1
>d1dlca3 f.1.3.1 (A:61-289) delta-Endotoxin (insectocide), N-terminal domain {Bacillus thuringiensis tenebrionis, CRYIIIA (BT13) [TaxId: 1444]}
Probab=72.14 E-value=1.2 Score=29.36 Aligned_cols=45 Identities=16% Similarity=0.179 Sum_probs=30.3
Q ss_pred CCcchhHHHHHH-------HHhccccHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Q psy7099 6 GFVGAYHFRAMC-------RLLGYQGIAVVMEELLKIVTSLIQGSLLQFTKTLM 52 (75)
Q Consensus 6 gFvG~pH~~aiv-------RLLGy~gia~vi~elLk~v~~~i~~~l~~yv~~l~ 52 (75)
|++|.|...+++ .+|--.. =+-+|+++.+|++|+..+.+++.+..
T Consensus 18 ~~~~~P~~g~~~~~~~~i~~~lwP~~--~~w~~~~~~ve~lId~~i~~~~~~~~ 69 (229)
T d1dlca3 18 GVVGFPFGGALVSFYTNFLNTIWPSE--DPWKAFMEQVEALMDQKIADYAKNKA 69 (229)
T ss_dssp TSCBSCCHHHHHHHHHHHHHHTSSSH--HHHHHHHHHHHHHHTCCCCHHHHHHH
T ss_pred HhcCCCcHHHHHHHHHHHHHHhCCCC--cHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 566777655544 4442221 13789999999999888888876654
No 2
>d1veha_ d.52.8.1 (A:) HIRA-interacting protein 5, HIRIP5 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=52.95 E-value=4 Score=23.91 Aligned_cols=21 Identities=10% Similarity=0.341 Sum_probs=17.1
Q ss_pred HHHHHHHHHHHHhhHHHHHHH
Q psy7099 30 EELLKIVTSLIQGSLLQFTKT 50 (75)
Q Consensus 30 ~elLk~v~~~i~~~l~~yv~~ 50 (75)
+|+++.++..|...++|++.+
T Consensus 12 ~e~~~~I~~vL~~~IrP~l~~ 32 (92)
T d1veha_ 12 DEVVAMIKELLDTRIRPTVQE 32 (92)
T ss_dssp CHHHHHHHHHHHHTTHHHHHH
T ss_pred HHHHHHHHHHHHHhcChHHHH
Confidence 477888888998889999863
No 3
>d2a0ba_ a.24.10.1 (A:) Aerobic respiration control sensor protein, ArcB {Escherichia coli [TaxId: 562]}
Probab=48.60 E-value=14 Score=20.73 Aligned_cols=43 Identities=16% Similarity=0.222 Sum_probs=25.3
Q ss_pred CCcchhHHHHHHHHhccc---c----HHHHHHHHHHHHHHHHHhhHHHHHH
Q psy7099 6 GFVGAYHFRAMCRLLGYQ---G----IAVVMEELLKIVTSLIQGSLLQFTK 49 (75)
Q Consensus 6 gFvG~pH~~aivRLLGy~---g----ia~vi~elLk~v~~~i~~~l~~yv~ 49 (75)
+.+|++++..+++-+-.. + +.-.+++|-+.++..++. ++.|+.
T Consensus 66 ~~~G~~~l~~~~~~lE~~~~~~~~~~~~~~l~~l~~~~~~~~~~-L~~~l~ 115 (118)
T d2a0ba_ 66 GSVGLRHLQQLGQQIQSPDLPAWEDNVGEWIEEMKEEWRHDVEV-LKAWVA 115 (118)
T ss_dssp HHTTCHHHHHHHHHHTCTTSTTHHHHHHHHHHHHHHHHHHHHHH-HHHHHH
T ss_pred HHcCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHH-HHHHHh
Confidence 568999999999998642 1 222334444444444422 555553
No 4
>d1i5pa3 f.1.3.1 (A:1-263) delta-Endotoxin (insectocide), N-terminal domain {Bacillus thuringiensis subsp. kurstaki, CRY2AA [TaxId: 29339]}
Probab=33.07 E-value=13 Score=24.82 Aligned_cols=41 Identities=12% Similarity=0.162 Sum_probs=28.0
Q ss_pred HHHHHHHHhccccHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Q psy7099 12 HFRAMCRLLGYQGIAVVMEELLKIVTSLIQGSLLQFTKTLM 52 (75)
Q Consensus 12 H~~aivRLLGy~gia~vi~elLk~v~~~i~~~l~~yv~~l~ 52 (75)
=+..++.+|--.+=.=+-+++++.+|++|+..|..++++..
T Consensus 73 ils~l~~~lwP~~~~~~w~~~~~~vE~LIdqki~~~~~~~a 113 (263)
T d1i5pa3 73 ILSELWGIIFPSGSTNLMQDILRETEQFLNQRLNTDTLARV 113 (263)
T ss_dssp CHHHHHHHHSGGGCCHHHHHHHHHHHHHHTCCCCHHHHHHH
T ss_pred HHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35666666644333336789999999999888777766544
No 5
>d1jjcb2 a.6.1.1 (B:400-474) Domains B1 and B5 of PheRS-beta, PheT {Thermus thermophilus [TaxId: 274]}
Probab=31.80 E-value=3.6 Score=22.78 Aligned_cols=14 Identities=29% Similarity=0.703 Sum_probs=11.1
Q ss_pred HHHHHHhccccHHH
Q psy7099 14 RAMCRLLGYQGIAV 27 (75)
Q Consensus 14 ~aivRLLGy~gia~ 27 (75)
.-++|+-||.+||+
T Consensus 62 EEi~R~~Gyd~IP~ 75 (75)
T d1jjcb2 62 EEVARIQGYETIPL 75 (75)
T ss_dssp HHHHHHHCGGGSCC
T ss_pred HHHHHHhCccCCCC
Confidence 45789999998864
No 6
>d2j8xa1 c.18.1.1 (A:26-255) Uracil-DNA glycosylase {Epstein-Barr virus [TaxId: 10376]}
Probab=27.91 E-value=12 Score=24.99 Aligned_cols=23 Identities=26% Similarity=0.364 Sum_probs=18.5
Q ss_pred ccccCCcchhHHHHHHHHhcccc
Q psy7099 2 VKFLGFVGAYHFRAMCRLLGYQG 24 (75)
Q Consensus 2 ~ly~gFvG~pH~~aivRLLGy~g 24 (75)
+.|+||+|.-||.-+=..|-.+|
T Consensus 200 sa~~gF~g~~~F~k~N~~L~~~~ 222 (230)
T d2j8xa1 200 SAQQKFLGNNHFVLANNFLREKG 222 (230)
T ss_dssp CSSCCSTTCCHHHHHHHHHHHTT
T ss_pred cccCCCCCCChHHHHHHHHHHCC
Confidence 35889999999998877776655
No 7
>d2hxma1 c.18.1.1 (A:82-304) Uracil-DNA glycosylase {Human (Homo sapiens) [TaxId: 9606]}
Probab=27.15 E-value=12 Score=24.97 Aligned_cols=23 Identities=35% Similarity=0.599 Sum_probs=18.2
Q ss_pred ccccCCcchhHHHHHHHHhcccc
Q psy7099 2 VKFLGFVGAYHFRAMCRLLGYQG 24 (75)
Q Consensus 2 ~ly~gFvG~pH~~aivRLLGy~g 24 (75)
+.|+||+|.-||.-+=..|-.+|
T Consensus 192 s~~~gF~~s~~F~k~N~~L~~~~ 214 (223)
T d2hxma1 192 SVYRGFFGCRHFSKTNELLQKSG 214 (223)
T ss_dssp TGGGTTTTCCHHHHHHHHHHHTT
T ss_pred ccCCCCCCCCHHHHHHHHHHHcC
Confidence 45899999999998877665554
No 8
>d3euga_ c.18.1.1 (A:) Uracil-DNA glycosylase {Escherichia coli [TaxId: 562]}
Probab=21.52 E-value=17 Score=24.13 Aligned_cols=23 Identities=30% Similarity=0.481 Sum_probs=17.2
Q ss_pred ccccCCcchhHHHHHHHHhcccc
Q psy7099 2 VKFLGFVGAYHFRAMCRLLGYQG 24 (75)
Q Consensus 2 ~ly~gFvG~pH~~aivRLLGy~g 24 (75)
+.|+||+|..||.-+=..|-.+|
T Consensus 188 sa~rgF~g~~~F~k~N~~L~~~~ 210 (225)
T d3euga_ 188 SAHRGFFGCNHFVLANQWLEQHG 210 (225)
T ss_dssp TGGGTTTTCCHHHHHHHHHHHTT
T ss_pred hcCCCCCCCCHHHHHHHHHHHcC
Confidence 35899999999987766555444
No 9
>d1xhja_ d.52.8.1 (A:) Nitrogen fixation protein NifU homolog SE0630 {Staphylococcus epidermidis [TaxId: 1282]}
Probab=19.30 E-value=34 Score=19.39 Aligned_cols=19 Identities=21% Similarity=0.349 Sum_probs=13.2
Q ss_pred HHHHHHHHHHHhhHHHHHHH
Q psy7099 31 ELLKIVTSLIQGSLLQFTKT 50 (75)
Q Consensus 31 elLk~v~~~i~~~l~~yv~~ 50 (75)
++++.|+..|. .++|+++.
T Consensus 7 ~l~~~I~~vLe-~IRP~l~~ 25 (88)
T d1xhja_ 7 TMFDQVAEVIE-RLRPFLLR 25 (88)
T ss_dssp CHHHHHHHHHH-HHHHHHHH
T ss_pred HHHHHHHHHHH-HhhHHHHh
Confidence 46677777774 58888754
No 10
>d2gm8a1 a.132.1.3 (A:2-212) TenA homolog PAE0170 {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}
Probab=19.17 E-value=44 Score=19.95 Aligned_cols=27 Identities=26% Similarity=0.267 Sum_probs=19.9
Q ss_pred HHHHHHHHHHHHHHhhH-HHHHHHHHHh
Q psy7099 28 VMEELLKIVTSLIQGSL-LQFTKTLMDA 54 (75)
Q Consensus 28 vi~elLk~v~~~i~~~l-~~yv~~l~~~ 54 (75)
|.+||.+..+.+.+..+ .|+|+++.+|
T Consensus 1 ~t~~L~~~~~~~w~~~~~HPFv~~l~~G 28 (211)
T d2gm8a1 1 VTGELRRRADGIWQRILAHPFVAELYAG 28 (211)
T ss_dssp HHHHHHHHTHHHHHHHHTCHHHHHHHHT
T ss_pred ChHHHHHhhHHHHHHHHCCHHHHHHHcC
Confidence 35678888887776655 5899988864
Done!