RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy7099
         (75 letters)



>d1zlba1 a.133.1.2 (A:1-122) Snake phospholipase A2 {Jararacussu
          (Bothrops jararacussu) [TaxId: 8726]}
          Length = 122

 Score = 25.7 bits (56), Expect = 0.37
 Identities = 9/25 (36%), Positives = 11/25 (44%)

Query: 43 SLLQFTKTLMDAMPKQCKLPRYDYG 67
          SL QF K +   M +   L    YG
Sbjct: 1  SLWQFGKMINYVMGESGVLQYLSYG 25


>d3buxb3 d.93.1.1 (B:264-351) Cbl {Human (Homo sapiens) [TaxId:
          9606]}
          Length = 88

 Score = 23.3 bits (50), Expect = 2.4
 Identities = 14/44 (31%), Positives = 18/44 (40%)

Query: 3  KFLGFVGAYHFRAMCRLLGYQGIAVVMEELLKIVTSLIQGSLLQ 46
          KF+   G+Y FR  C  LG   I  V  +   + T      L Q
Sbjct: 20 KFIHKPGSYIFRLSCTRLGQWAIGYVTADGNILQTIPHNKPLFQ 63


>d1g4ia_ a.133.1.2 (A:) Phospholipase A2 {Cow (Bos taurus),
          pancreas [TaxId: 9913]}
          Length = 123

 Score = 23.4 bits (50), Expect = 3.2
 Identities = 7/26 (26%), Positives = 12/26 (46%), Gaps = 1/26 (3%)

Query: 43 SLLQFTKTLMDAMPKQCKLPRY-DYG 67
          +L QF   +   +P    L  + +YG
Sbjct: 1  ALWQFNGMIKCKIPSSEPLLDFNNYG 26


>d1ppaa_ a.133.1.2 (A:) Snake phospholipase A2 {Eastern
          cottonmouth snake (Agkistrodon piscivorus piscivorus)
          [TaxId: 8716]}
          Length = 121

 Score = 23.0 bits (49), Expect = 3.8
 Identities = 7/28 (25%), Positives = 12/28 (42%), Gaps = 2/28 (7%)

Query: 43 SLLQFTKTLMDAMPKQCKLPRY-DYGSP 69
          S+L+  K ++    K   +  Y  YG  
Sbjct: 1  SVLELGKMILQETGKNA-ITSYGSYGCN 27


>d1rw5a1 a.26.1.1 (A:1-199) Prolactin (placental lactogen) {Human
           (Homo sapiens) [TaxId: 9606]}
          Length = 199

 Score = 22.9 bits (49), Expect = 4.3
 Identities = 5/30 (16%), Positives = 13/30 (43%), Gaps = 2/30 (6%)

Query: 29  MEELLKIVTSLIQGSL--LQFTKTLMDAMP 56
            ++ L ++ S+++     L    T +  M 
Sbjct: 77  QKDFLSLIVSILRSWNEPLYHLVTEVRGMQ 106


>d1txka2 b.30.5.9 (A:23-396) Glucans biosynthesis protein G (MdoG,
           OpgG), N-terminal domain {Escherichia coli [TaxId: 562]}
          Length = 374

 Score = 22.7 bits (49), Expect = 5.8
 Identities = 7/28 (25%), Positives = 14/28 (50%), Gaps = 4/28 (14%)

Query: 4   FLGFVGAYHFRAMCRLLGY----QGIAV 27
            +  +GA +FR +     Y    +G+A+
Sbjct: 126 IVSMLGASYFRVIGAGQVYGLSARGLAI 153


>d1f6fa_ a.26.1.1 (A:) Prolactin (placental lactogen) {Sheep (Ovis
           aries) [TaxId: 9940]}
          Length = 197

 Score = 22.2 bits (47), Expect = 8.3
 Identities = 8/36 (22%), Positives = 13/36 (36%), Gaps = 2/36 (5%)

Query: 23  QGIAVVMEELLKIVTSLIQGSL--LQFTKTLMDAMP 56
           + I    + L K+V SL+      L    T +    
Sbjct: 73  EAINTEDKILFKLVISLLHSWDEPLHHAVTELANSK 108


>d1m8ta_ a.133.1.2 (A:) Snake phospholipase A2 {King cobra
          (Ophiophagus hannah), an acidic isoform [TaxId: 8665]}
          Length = 119

 Score = 22.2 bits (47), Expect = 8.4
 Identities = 8/25 (32%), Positives = 11/25 (44%), Gaps = 1/25 (4%)

Query: 44 LLQFTKTLMDAMPKQCKLPRY-DYG 67
          L+QF   +   +P       Y DYG
Sbjct: 2  LVQFNGMIRCTIPGSIPWWDYSDYG 26


>d1p7oa_ a.133.1.2 (A:) Snake phospholipase A2 {Small-eye snake
          (Micropechis ikaheka), different isoforms [TaxId:
          66188]}
          Length = 124

 Score = 21.8 bits (46), Expect = 9.5
 Identities = 8/25 (32%), Positives = 13/25 (52%), Gaps = 1/25 (4%)

Query: 44 LLQFTKTLMDAMPKQCKLPRY-DYG 67
          LLQF   +   +P +  L  + +YG
Sbjct: 2  LLQFRNMIKCTIPGREPLLAFSNYG 26


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.330    0.145    0.441 

Gapped
Lambda     K      H
   0.267   0.0600    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 283,681
Number of extensions: 9737
Number of successful extensions: 30
Number of sequences better than 10.0: 1
Number of HSP's gapped: 30
Number of HSP's successfully gapped: 12
Length of query: 75
Length of database: 2,407,596
Length adjustment: 42
Effective length of query: 33
Effective length of database: 1,830,936
Effective search space: 60420888
Effective search space used: 60420888
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 47 (22.2 bits)