Query psy710
Match_columns 591
No_of_seqs 935 out of 3928
Neff 11.4
Searched_HMMs 29240
Date Fri Aug 16 18:10:46 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy710.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/710hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ymu_A WD-40 repeat protein; u 100.0 2.2E-59 7.5E-64 488.5 58.7 511 3-586 12-546 (577)
2 2ymu_A WD-40 repeat protein; u 100.0 1.9E-56 6.6E-61 466.3 57.3 471 4-575 54-577 (577)
3 1nr0_A Actin interacting prote 100.0 5.9E-56 2E-60 463.3 55.3 498 4-577 15-610 (611)
4 1nr0_A Actin interacting prote 100.0 6.6E-52 2.3E-56 432.7 51.8 428 3-516 55-592 (611)
5 3sfz_A APAF-1, apoptotic pepti 100.0 2E-51 6.7E-56 466.1 52.1 479 4-582 612-1162(1249)
6 2oaj_A Protein SNI1; WD40 repe 100.0 1.7E-50 5.9E-55 436.5 52.0 518 2-587 12-792 (902)
7 3sfz_A APAF-1, apoptotic pepti 100.0 4.4E-49 1.5E-53 446.8 50.4 513 4-577 654-1248(1249)
8 1pgu_A Actin interacting prote 100.0 3.5E-48 1.2E-52 407.3 51.6 491 4-578 15-614 (615)
9 3ow8_A WD repeat-containing pr 100.0 3.1E-46 1.1E-50 357.1 37.9 291 40-377 24-320 (321)
10 1vyh_C Platelet-activating fac 100.0 8.6E-46 2.9E-50 367.1 36.0 285 3-336 104-410 (410)
11 1vyh_C Platelet-activating fac 100.0 1.1E-45 3.7E-50 366.3 36.1 290 39-377 99-410 (410)
12 3ow8_A WD repeat-containing pr 100.0 6.7E-45 2.3E-49 347.8 36.4 285 3-336 28-320 (321)
13 4g56_B MGC81050 protein; prote 100.0 7.6E-45 2.6E-49 353.0 34.7 328 11-384 9-349 (357)
14 3mkq_A Coatomer beta'-subunit; 100.0 2.2E-44 7.5E-49 391.0 42.2 307 3-369 9-323 (814)
15 1got_B GT-beta; complex (GTP-b 100.0 6.9E-44 2.4E-48 344.5 40.3 293 39-375 46-340 (340)
16 1pgu_A Actin interacting prote 100.0 2E-43 6.7E-48 371.2 47.0 397 4-426 60-604 (615)
17 1got_B GT-beta; complex (GTP-b 100.0 3.9E-44 1.3E-48 346.3 37.8 284 3-334 51-340 (340)
18 2ynn_A Coatomer subunit beta'; 100.0 5.6E-44 1.9E-48 339.3 36.9 284 4-337 10-302 (304)
19 1gxr_A ESG1, transducin-like e 100.0 1.4E-43 4.9E-48 342.8 39.4 323 5-377 7-336 (337)
20 3fm0_A Protein CIAO1; WDR39,SG 100.0 3E-43 1E-47 340.6 39.8 308 40-383 7-339 (345)
21 3fm0_A Protein CIAO1; WDR39,SG 100.0 1.4E-43 4.9E-48 342.9 37.4 307 4-343 12-341 (345)
22 3frx_A Guanine nucleotide-bind 100.0 4.1E-43 1.4E-47 335.7 40.2 288 41-377 10-316 (319)
23 1r5m_A SIR4-interacting protei 100.0 5.6E-44 1.9E-48 357.4 35.5 337 4-377 42-424 (425)
24 4gqb_B Methylosome protein 50; 100.0 1E-43 3.5E-48 341.9 33.8 287 4-340 27-334 (344)
25 2ynn_A Coatomer subunit beta'; 100.0 5.8E-43 2E-47 332.4 38.5 289 40-377 5-301 (304)
26 4g56_B MGC81050 protein; prote 100.0 8.9E-44 3.1E-48 345.5 32.0 287 4-338 39-344 (357)
27 2pbi_B Guanine nucleotide-bind 100.0 5.6E-43 1.9E-47 339.6 37.4 284 4-334 61-354 (354)
28 2pbi_B Guanine nucleotide-bind 100.0 9.3E-43 3.2E-47 338.1 38.6 296 39-375 55-354 (354)
29 3iz6_a 40S ribosomal protein R 100.0 1.2E-43 4.2E-48 348.2 31.4 313 31-377 48-374 (380)
30 4gqb_B Methylosome protein 50; 100.0 5.6E-43 1.9E-47 336.8 34.8 299 31-377 16-330 (344)
31 2oaj_A Protein SNI1; WD40 repe 100.0 2.4E-42 8.2E-47 373.1 41.8 462 43-586 12-672 (902)
32 2pm9_A Protein WEB1, protein t 100.0 1E-44 3.5E-49 361.8 21.5 336 5-377 10-413 (416)
33 3frx_A Guanine nucleotide-bind 100.0 3.9E-42 1.3E-46 328.9 38.1 292 3-338 13-318 (319)
34 2xzm_R RACK1; ribosome, transl 100.0 6.3E-42 2.2E-46 331.3 39.0 300 3-339 17-342 (343)
35 2hes_X YDR267CP; beta-propelle 100.0 7.5E-42 2.6E-46 328.6 39.2 306 39-377 5-327 (330)
36 2xzm_R RACK1; ribosome, transl 100.0 6.8E-42 2.3E-46 331.1 37.6 290 39-377 12-339 (343)
37 1erj_A Transcriptional repress 100.0 5.1E-42 1.7E-46 338.3 36.7 334 4-377 12-388 (393)
38 3iz6_a 40S ribosomal protein R 100.0 3E-43 1E-47 345.5 27.6 299 3-339 62-377 (380)
39 4ery_A WD repeat-containing pr 100.0 1.5E-41 5E-46 324.6 38.0 284 4-336 20-311 (312)
40 1erj_A Transcriptional repress 100.0 8.6E-42 2.9E-46 336.7 37.0 286 5-338 62-390 (393)
41 3vl1_A 26S proteasome regulato 100.0 3.7E-42 1.3E-46 343.7 30.3 320 8-377 57-418 (420)
42 2hes_X YDR267CP; beta-propelle 100.0 5.2E-41 1.8E-45 322.7 37.0 291 3-337 10-328 (330)
43 4ery_A WD repeat-containing pr 100.0 6.7E-41 2.3E-45 320.1 37.0 291 39-377 14-311 (312)
44 1r5m_A SIR4-interacting protei 100.0 1E-40 3.5E-45 333.7 36.2 332 29-426 25-415 (425)
45 2ovr_B FBW7, F-BOX/WD repeat p 100.0 8.8E-40 3E-44 328.7 41.9 317 3-378 114-442 (445)
46 4aow_A Guanine nucleotide-bind 100.0 8.6E-40 2.9E-44 316.7 40.1 290 41-380 31-338 (340)
47 2j04_B YDR362CP, TAU91; beta p 100.0 1.1E-41 3.9E-46 343.8 26.3 323 6-377 132-516 (524)
48 1gxr_A ESG1, transducin-like e 100.0 1.2E-39 4E-44 315.3 37.8 283 4-336 48-336 (337)
49 1k8k_C P40, ARP2/3 complex 41 100.0 9.5E-40 3.2E-44 320.6 36.0 305 3-339 4-363 (372)
50 3zwl_B Eukaryotic translation 100.0 1.3E-38 4.6E-43 312.0 42.0 297 3-377 28-345 (369)
51 4aow_A Guanine nucleotide-bind 100.0 5.7E-39 1.9E-43 310.9 38.8 296 3-339 34-339 (340)
52 2pm9_A Protein WEB1, protein t 100.0 1.9E-40 6.5E-45 330.9 27.8 328 49-427 13-405 (416)
53 3v7d_B Cell division control p 100.0 2.2E-38 7.4E-43 320.6 43.0 313 39-425 112-452 (464)
54 3mkq_A Coatomer beta'-subunit; 100.0 1.4E-38 5E-43 345.3 44.4 436 40-586 5-468 (814)
55 1sq9_A Antiviral protein SKI8; 100.0 3.1E-39 1.1E-43 319.9 35.3 294 3-339 12-397 (397)
56 3v7d_B Cell division control p 100.0 1.6E-38 5.6E-43 321.5 40.9 338 3-376 117-461 (464)
57 3dm0_A Maltose-binding peripla 100.0 9.8E-39 3.3E-43 339.0 40.9 287 42-377 376-692 (694)
58 3ei3_B DNA damage-binding prot 100.0 6.6E-39 2.3E-43 315.8 36.4 298 40-377 65-381 (383)
59 1k8k_C P40, ARP2/3 complex 41 100.0 1.4E-39 4.7E-44 319.5 30.0 291 44-378 4-361 (372)
60 3gre_A Serine/threonine-protei 100.0 1.2E-39 4.1E-44 327.2 29.4 327 14-375 34-437 (437)
61 1sq9_A Antiviral protein SKI8; 100.0 5.1E-39 1.8E-43 318.4 33.3 287 41-377 9-394 (397)
62 3vl1_A 26S proteasome regulato 100.0 2.5E-39 8.7E-44 323.1 29.8 314 50-424 58-408 (420)
63 3ei3_B DNA damage-binding prot 100.0 6.6E-39 2.3E-43 315.8 30.9 280 4-337 70-382 (383)
64 3odt_A Protein DOA1; ubiquitin 100.0 2.9E-38 9.8E-43 302.1 34.4 288 3-345 14-304 (313)
65 3dwl_C Actin-related protein 2 100.0 5.1E-40 1.7E-44 323.1 22.4 337 3-376 7-377 (377)
66 3dm0_A Maltose-binding peripla 100.0 3.7E-38 1.3E-42 334.6 38.2 297 3-336 378-692 (694)
67 3k26_A Polycomb protein EED; W 100.0 6.5E-39 2.2E-43 313.9 29.6 294 2-337 13-366 (366)
68 3i2n_A WD repeat-containing pr 100.0 3.6E-39 1.2E-43 314.5 27.6 307 3-340 14-356 (357)
69 4h5i_A Guanine nucleotide-exch 100.0 1.2E-38 4.3E-43 310.1 31.3 296 48-378 14-343 (365)
70 3odt_A Protein DOA1; ubiquitin 100.0 2.3E-37 8E-42 295.8 39.3 290 39-384 9-301 (313)
71 4e54_B DNA damage-binding prot 100.0 2.5E-39 8.4E-44 323.9 25.6 302 42-382 113-433 (435)
72 2j04_A TAU60, YPL007P, hypothe 100.0 3.4E-40 1.2E-44 323.1 16.0 323 4-425 12-350 (588)
73 3i2n_A WD repeat-containing pr 100.0 1.5E-37 5.3E-42 303.0 34.3 292 42-377 12-352 (357)
74 2ovr_B FBW7, F-BOX/WD repeat p 100.0 2.5E-36 8.7E-41 303.4 43.8 310 40-427 110-429 (445)
75 4h5i_A Guanine nucleotide-exch 100.0 7.8E-38 2.7E-42 304.4 30.9 283 7-337 14-343 (365)
76 4e54_B DNA damage-binding prot 100.0 7.7E-39 2.6E-43 320.3 24.0 290 4-341 116-434 (435)
77 3k26_A Polycomb protein EED; W 100.0 1.3E-37 4.5E-42 304.6 29.8 295 43-377 13-365 (366)
78 2pm7_B Protein transport prote 100.0 8.2E-37 2.8E-41 288.9 33.0 251 2-283 4-285 (297)
79 4a11_B DNA excision repair pro 100.0 5.6E-37 1.9E-41 304.8 32.6 317 28-387 22-373 (408)
80 4a11_B DNA excision repair pro 100.0 4.7E-37 1.6E-41 305.4 31.7 323 3-377 39-404 (408)
81 3gre_A Serine/threonine-protei 100.0 1.8E-37 6E-42 311.4 27.3 295 3-334 59-437 (437)
82 2pm7_B Protein transport prote 100.0 1.6E-36 5.4E-41 287.0 32.1 258 42-337 3-285 (297)
83 4aez_A CDC20, WD repeat-contai 100.0 1.3E-36 4.3E-41 301.1 32.3 288 5-344 89-387 (401)
84 4aez_A CDC20, WD repeat-contai 100.0 2.7E-36 9.3E-41 298.6 34.3 291 46-389 89-390 (401)
85 2j04_B YDR362CP, TAU91; beta p 100.0 9.2E-38 3.1E-42 315.3 22.9 328 47-426 132-507 (524)
86 3zwl_B Eukaryotic translation 100.0 1.4E-35 4.9E-40 290.4 37.9 283 83-426 23-336 (369)
87 3dw8_B Serine/threonine-protei 100.0 4.4E-36 1.5E-40 302.3 34.4 315 46-377 26-445 (447)
88 1yfq_A Cell cycle arrest prote 100.0 4.4E-36 1.5E-40 290.9 32.2 279 2-334 6-321 (342)
89 4gga_A P55CDC, cell division c 100.0 9.3E-36 3.2E-40 296.6 34.7 280 10-342 108-400 (420)
90 3bg1_A Protein SEC13 homolog; 100.0 9.8E-37 3.3E-41 291.0 26.2 251 2-282 8-292 (316)
91 1yfq_A Cell cycle arrest prote 100.0 1.5E-35 5.1E-40 287.1 34.0 284 42-376 5-322 (342)
92 3dw8_B Serine/threonine-protei 100.0 5E-36 1.7E-40 301.9 29.8 299 6-336 27-445 (447)
93 3f3f_A Nucleoporin SEH1; struc 100.0 1.1E-35 3.6E-40 288.9 31.1 308 2-343 6-343 (351)
94 4gga_A P55CDC, cell division c 100.0 2.3E-35 7.8E-40 293.8 33.6 289 50-389 107-405 (420)
95 3mmy_A MRNA export factor; mRN 100.0 2.4E-35 8E-40 288.8 33.2 295 38-377 29-345 (368)
96 3bg1_A Protein SEC13 homolog; 100.0 2.4E-36 8.3E-41 288.3 25.3 255 43-336 8-292 (316)
97 3jrp_A Fusion protein of prote 100.0 1.4E-34 4.7E-39 284.5 36.8 260 39-338 2-288 (379)
98 1p22_A F-BOX/WD-repeat protein 100.0 3.2E-35 1.1E-39 294.3 32.8 303 4-357 130-434 (435)
99 3f3f_A Nucleoporin SEH1; struc 100.0 3.7E-35 1.3E-39 285.1 31.7 307 42-385 5-343 (351)
100 4ggc_A P55CDC, cell division c 100.0 2.7E-34 9.1E-39 275.2 36.1 276 10-338 28-316 (318)
101 1p22_A F-BOX/WD-repeat protein 100.0 7.7E-35 2.6E-39 291.5 33.3 270 45-377 130-413 (435)
102 3mmy_A MRNA export factor; mRN 100.0 6.3E-35 2.1E-39 285.7 31.5 282 3-335 35-344 (368)
103 4ggc_A P55CDC, cell division c 100.0 8.8E-35 3E-39 278.6 31.0 278 50-377 27-314 (318)
104 3dwl_C Actin-related protein 2 100.0 2E-35 7E-40 290.3 25.9 255 87-377 6-280 (377)
105 3jrp_A Fusion protein of prote 100.0 1.5E-33 5E-38 277.2 33.0 254 84-378 3-287 (379)
106 2j04_A TAU60, YPL007P, hypothe 100.0 2.6E-36 9E-41 295.7 12.4 287 4-367 49-350 (588)
107 2aq5_A Coronin-1A; WD40 repeat 100.0 4.3E-34 1.5E-38 283.1 28.2 291 9-341 36-346 (402)
108 3bws_A Protein LP49; two-domai 100.0 1.3E-32 4.6E-37 275.5 36.8 319 7-377 60-431 (433)
109 2aq5_A Coronin-1A; WD40 repeat 100.0 1.4E-33 4.8E-38 279.4 26.0 288 50-377 36-341 (402)
110 1k32_A Tricorn protease; prote 100.0 7E-32 2.4E-36 298.8 41.1 341 4-411 49-481 (1045)
111 3vu4_A KMHSV2; beta-propeller 100.0 7.2E-33 2.5E-37 268.6 28.0 288 33-378 3-336 (355)
112 3vu4_A KMHSV2; beta-propeller 100.0 3.5E-32 1.2E-36 263.8 31.6 286 4-338 16-337 (355)
113 1l0q_A Surface layer protein; 100.0 4.3E-31 1.5E-35 260.8 39.4 308 19-381 2-344 (391)
114 2vdu_B TRNA (guanine-N(7)-)-me 100.0 6.1E-32 2.1E-36 271.7 33.6 295 49-379 5-392 (450)
115 3jro_A Fusion protein of prote 100.0 1.1E-33 3.8E-38 301.6 21.5 253 2-285 4-287 (753)
116 3jro_A Fusion protein of prote 100.0 5.2E-33 1.8E-37 296.4 25.9 258 42-339 3-287 (753)
117 2xyi_A Probable histone-bindin 100.0 5.2E-32 1.8E-36 270.2 30.7 304 7-338 45-411 (430)
118 2vdu_B TRNA (guanine-N(7)-)-me 100.0 8.8E-32 3E-36 270.5 32.3 285 7-336 4-390 (450)
119 2xyi_A Probable histone-bindin 100.0 1.6E-31 5.5E-36 266.6 32.8 295 49-377 46-409 (430)
120 1l0q_A Surface layer protein; 100.0 1.2E-30 4.2E-35 257.6 36.4 275 61-389 3-285 (391)
121 3lrv_A PRE-mRNA-splicing facto 100.0 3E-32 1E-36 263.5 24.1 278 55-377 43-332 (343)
122 3bws_A Protein LP49; two-domai 100.0 8E-31 2.7E-35 262.6 32.8 279 7-337 122-432 (433)
123 1k32_A Tricorn protease; prote 100.0 4.8E-30 1.6E-34 284.1 41.7 371 6-425 13-440 (1045)
124 2w18_A PALB2, fancn, partner a 100.0 1.3E-30 4.4E-35 239.7 30.4 283 11-377 43-356 (356)
125 1nir_A Nitrite reductase; hemo 100.0 2.3E-30 7.8E-35 263.7 32.0 334 14-389 144-524 (543)
126 2hqs_A Protein TOLB; TOLB, PAL 100.0 3.5E-30 1.2E-34 254.8 27.7 300 49-412 63-408 (415)
127 4gq1_A NUP37; propeller, trans 100.0 3.7E-31 1.3E-35 260.4 20.4 258 91-377 88-388 (393)
128 3lrv_A PRE-mRNA-splicing facto 100.0 1.7E-30 5.8E-35 251.2 24.7 269 14-337 43-333 (343)
129 4gq1_A NUP37; propeller, trans 100.0 1.5E-30 5.1E-35 256.1 24.3 280 8-336 16-388 (393)
130 2hqs_A Protein TOLB; TOLB, PAL 100.0 4.1E-30 1.4E-34 254.3 27.1 299 8-360 63-410 (415)
131 2ecf_A Dipeptidyl peptidase IV 100.0 7.9E-29 2.7E-33 265.6 31.1 336 7-377 36-458 (741)
132 1xfd_A DIP, dipeptidyl aminope 100.0 3.3E-28 1.1E-32 260.2 23.8 357 6-411 15-419 (723)
133 2w18_A PALB2, fancn, partner a 100.0 7.8E-27 2.7E-31 214.7 28.6 272 50-427 41-348 (356)
134 1nir_A Nitrite reductase; hemo 100.0 1.8E-26 6.3E-31 234.9 33.5 300 10-348 181-525 (543)
135 2z3z_A Dipeptidyl aminopeptida 100.0 1.3E-26 4.3E-31 247.1 29.5 328 9-381 27-437 (706)
136 2ecf_A Dipeptidyl peptidase IV 100.0 8E-27 2.7E-31 250.1 26.1 299 48-411 36-434 (741)
137 1ri6_A Putative isomerase YBHE 100.0 3.2E-25 1.1E-29 214.4 34.4 294 21-360 7-335 (343)
138 1ri6_A Putative isomerase YBHE 99.9 1.5E-24 5E-29 209.8 34.0 276 63-377 8-307 (343)
139 2z3z_A Dipeptidyl aminopeptida 99.9 4.5E-25 1.5E-29 235.1 29.6 316 8-377 82-475 (706)
140 1pby_B Quinohemoprotein amine 99.9 1.2E-24 4.1E-29 209.8 27.3 280 61-389 2-320 (337)
141 3u4y_A Uncharacterized protein 99.9 4.3E-24 1.5E-28 205.4 30.5 288 13-343 3-310 (331)
142 3u4y_A Uncharacterized protein 99.9 9.9E-24 3.4E-28 202.9 32.9 277 54-377 3-303 (331)
143 2ojh_A Uncharacterized protein 99.9 3.4E-24 1.2E-28 202.4 26.6 255 65-369 17-293 (297)
144 3vgz_A Uncharacterized protein 99.9 2.7E-23 9.3E-28 201.8 31.8 280 47-369 39-335 (353)
145 2ojh_A Uncharacterized protein 99.9 3.2E-24 1.1E-28 202.6 24.0 256 24-328 17-293 (297)
146 1pby_B Quinohemoprotein amine 99.9 3.5E-24 1.2E-28 206.5 24.0 272 20-345 2-318 (337)
147 3vgz_A Uncharacterized protein 99.9 6.2E-23 2.1E-27 199.2 30.5 269 7-328 40-335 (353)
148 1z68_A Fibroblast activation p 99.9 1.9E-24 6.4E-29 230.7 20.5 332 11-388 19-452 (719)
149 3hfq_A Uncharacterized protein 99.9 1.9E-21 6.5E-26 188.2 35.8 271 68-377 14-316 (347)
150 3o4h_A Acylamino-acid-releasin 99.9 4E-23 1.4E-27 214.6 25.6 268 48-377 21-314 (582)
151 3hfq_A Uncharacterized protein 99.9 4.6E-22 1.6E-26 192.5 30.9 288 20-342 3-324 (347)
152 3o4h_A Acylamino-acid-releasin 99.9 1.5E-23 5E-28 217.9 21.2 271 6-337 20-315 (582)
153 4a5s_A Dipeptidyl peptidase 4 99.9 2.7E-22 9.4E-27 213.8 31.3 337 5-386 14-456 (740)
154 3scy_A Hypothetical bacterial 99.9 1E-21 3.4E-26 191.2 32.2 312 13-356 7-360 (361)
155 1xfd_A DIP, dipeptidyl aminope 99.9 1.3E-22 4.3E-27 216.9 27.8 309 9-377 62-442 (723)
156 1z68_A Fibroblast activation p 99.9 7E-23 2.4E-27 218.6 23.2 297 53-411 20-419 (719)
157 1jmx_B Amine dehydrogenase; ox 99.9 9E-22 3.1E-26 190.6 27.7 283 11-345 3-333 (349)
158 3scy_A Hypothetical bacterial 99.9 3.4E-20 1.2E-24 180.3 37.7 298 61-410 14-360 (361)
159 1jmx_B Amine dehydrogenase; ox 99.9 3.2E-22 1.1E-26 193.8 23.1 289 53-388 4-334 (349)
160 2oit_A Nucleoporin 214KDA; NH2 99.9 1.9E-20 6.5E-25 185.5 30.2 242 7-282 36-332 (434)
161 3pe7_A Oligogalacturonate lyas 99.9 1.3E-21 4.4E-26 192.6 19.9 275 12-335 40-380 (388)
162 3pe7_A Oligogalacturonate lyas 99.9 7.1E-21 2.4E-25 187.3 25.0 292 38-377 20-381 (388)
163 1jof_A Carboxy-CIS,CIS-muconat 99.9 6.4E-20 2.2E-24 178.4 29.5 279 62-377 4-340 (365)
164 3c5m_A Oligogalacturonate lyas 99.9 4.8E-21 1.6E-25 189.0 20.4 296 8-377 36-381 (396)
165 2oiz_A Aromatic amine dehydrog 99.9 9.1E-20 3.1E-24 176.3 26.3 290 17-360 13-360 (361)
166 4a5s_A Dipeptidyl peptidase 4 99.9 5.1E-20 1.8E-24 196.3 26.7 319 49-424 17-436 (740)
167 1jof_A Carboxy-CIS,CIS-muconat 99.9 1.9E-19 6.4E-24 175.1 28.0 280 21-340 4-344 (365)
168 3azo_A Aminopeptidase; POP fam 99.8 1.2E-19 4.1E-24 191.7 24.7 321 4-377 20-410 (662)
169 2oit_A Nucleoporin 214KDA; NH2 99.8 6.7E-20 2.3E-24 181.6 19.2 197 168-378 37-278 (434)
170 2oiz_A Aromatic amine dehydrog 99.8 1.8E-18 6.3E-23 167.1 28.3 302 59-411 14-357 (361)
171 3azo_A Aminopeptidase; POP fam 99.8 9.4E-18 3.2E-22 177.2 30.8 295 42-382 17-372 (662)
172 1qks_A Cytochrome CD1 nitrite 99.8 1.4E-16 4.9E-21 161.4 37.5 337 16-388 164-547 (567)
173 2gop_A Trilobed protease; beta 99.8 4.1E-17 1.4E-21 157.6 29.7 266 49-389 15-339 (347)
174 2gop_A Trilobed protease; beta 99.8 2.5E-17 8.7E-22 159.1 27.3 265 9-347 16-340 (347)
175 3c5m_A Oligogalacturonate lyas 99.8 2.1E-18 7.1E-23 170.1 17.2 277 35-389 16-338 (396)
176 1q7f_A NHL, brain tumor CG1071 99.8 1.8E-16 6E-21 148.6 29.1 242 4-284 26-281 (286)
177 2dg1_A DRP35, lactonase; beta 99.8 7.4E-17 2.5E-21 154.8 26.2 277 8-328 6-301 (333)
178 1q7f_A NHL, brain tumor CG1071 99.8 6.3E-16 2.2E-20 144.8 31.1 243 91-377 28-279 (286)
179 2dg1_A DRP35, lactonase; beta 99.8 1.4E-16 4.9E-21 152.8 26.1 273 49-368 6-300 (333)
180 3fvz_A Peptidyl-glycine alpha- 99.8 1.6E-16 5.6E-21 151.8 26.2 248 8-283 24-322 (329)
181 3fvz_A Peptidyl-glycine alpha- 99.8 4.7E-16 1.6E-20 148.6 28.7 239 93-377 24-321 (329)
182 3dsm_A Uncharacterized protein 99.7 2.3E-15 7.9E-20 143.5 30.3 280 27-355 15-319 (328)
183 2xdw_A Prolyl endopeptidase; a 99.7 8.8E-16 3E-20 163.0 30.0 277 17-339 81-416 (710)
184 2z2n_A Virginiamycin B lyase; 99.7 1.9E-14 6.4E-19 135.6 34.8 281 6-339 13-297 (299)
185 3e5z_A Putative gluconolactona 99.7 1.7E-15 5.7E-20 142.6 26.4 253 38-341 17-290 (296)
186 2bkl_A Prolyl endopeptidase; m 99.7 1.9E-16 6.6E-21 167.5 21.8 285 15-345 75-405 (695)
187 2xdw_A Prolyl endopeptidase; a 99.7 1.2E-15 4.1E-20 161.9 27.0 245 5-285 122-416 (710)
188 1qks_A Cytochrome CD1 nitrite 99.7 3.3E-14 1.1E-18 144.1 35.9 300 9-346 198-547 (567)
189 2z2n_A Virginiamycin B lyase; 99.7 9.8E-14 3.4E-18 130.7 36.9 280 45-377 11-294 (299)
190 3sjl_D Methylamine dehydrogena 99.7 4.4E-15 1.5E-19 140.8 25.0 293 12-358 37-384 (386)
191 3e5z_A Putative gluconolactona 99.7 8.2E-15 2.8E-19 137.9 26.0 237 85-377 20-283 (296)
192 2bkl_A Prolyl endopeptidase; m 99.7 4.1E-16 1.4E-20 165.0 17.8 244 4-286 117-400 (695)
193 2mad_H Methylamine dehydrogena 99.7 2.8E-13 9.7E-18 130.6 35.1 292 55-386 27-357 (373)
194 3dsm_A Uncharacterized protein 99.7 6.5E-15 2.2E-19 140.4 23.2 263 68-388 15-310 (328)
195 1rwi_B Serine/threonine-protei 99.7 1.3E-14 4.5E-19 134.5 23.9 239 9-286 25-267 (270)
196 3sjl_D Methylamine dehydrogena 99.7 3E-14 1E-18 135.2 26.2 298 54-389 38-373 (386)
197 1rwi_B Serine/threonine-protei 99.7 1.3E-14 4.4E-19 134.5 23.4 236 94-377 25-263 (270)
198 2qc5_A Streptogramin B lactona 99.7 4.2E-13 1.4E-17 126.4 34.0 280 46-377 17-299 (300)
199 2mad_H Methylamine dehydrogena 99.7 6.2E-13 2.1E-17 128.3 35.3 274 14-343 27-356 (373)
200 1yr2_A Prolyl oligopeptidase; 99.6 1.4E-14 4.7E-19 154.4 24.3 278 16-341 115-445 (741)
201 2qc5_A Streptogramin B lactona 99.6 7E-13 2.4E-17 124.8 33.0 278 7-336 19-299 (300)
202 3no2_A Uncharacterized protein 99.6 6.9E-14 2.3E-18 129.1 25.0 218 18-271 4-231 (276)
203 3no2_A Uncharacterized protein 99.6 1.1E-13 3.8E-18 127.7 24.2 239 59-345 4-260 (276)
204 1pjx_A Dfpase, DIISOPROPYLFLUO 99.6 9.8E-13 3.3E-17 124.8 29.4 246 45-337 14-299 (314)
205 3c75_H MADH, methylamine dehyd 99.6 2.5E-13 8.5E-18 131.4 25.0 290 58-386 82-409 (426)
206 1yr2_A Prolyl oligopeptidase; 99.6 9.2E-14 3.1E-18 148.0 22.3 245 5-286 160-444 (741)
207 3c75_H MADH, methylamine dehyd 99.6 2.3E-13 7.8E-18 131.7 20.8 276 17-344 82-409 (426)
208 1pjx_A Dfpase, DIISOPROPYLFLUO 99.6 1.1E-12 3.7E-17 124.5 24.8 238 8-284 18-300 (314)
209 3hrp_A Uncharacterized protein 99.5 2.5E-12 8.6E-17 125.9 27.3 239 8-281 131-408 (409)
210 3g4e_A Regucalcin; six bladed 99.5 4.1E-11 1.4E-15 112.3 30.4 228 94-367 14-261 (297)
211 3hrp_A Uncharacterized protein 99.5 9.7E-12 3.3E-16 121.7 26.6 249 49-335 131-408 (409)
212 3dr2_A Exported gluconolactona 99.5 1.7E-11 5.8E-16 115.5 24.5 243 38-331 34-301 (305)
213 2qe8_A Uncharacterized protein 99.5 6.7E-12 2.3E-16 120.4 21.5 276 49-374 17-317 (343)
214 3g4e_A Regucalcin; six bladed 99.5 6.5E-11 2.2E-15 111.0 27.6 233 46-326 10-261 (297)
215 3iuj_A Prolyl endopeptidase; h 99.4 6.3E-12 2.2E-16 132.5 22.8 251 46-345 126-413 (693)
216 3dr2_A Exported gluconolactona 99.4 3.4E-11 1.2E-15 113.4 24.8 235 85-371 37-300 (305)
217 3iuj_A Prolyl endopeptidase; h 99.4 2.7E-12 9.1E-17 135.4 18.6 243 4-286 125-408 (693)
218 2ghs_A AGR_C_1268P; regucalcin 99.4 1.2E-10 4.2E-15 110.6 28.1 221 11-273 52-292 (326)
219 1xip_A Nucleoporin NUP159; bet 99.4 4E-12 1.4E-16 121.2 17.2 170 9-226 39-231 (388)
220 1xip_A Nucleoporin NUP159; bet 99.4 3.6E-12 1.2E-16 121.5 16.8 170 169-365 39-231 (388)
221 1mda_H Methylamine dehydrogena 99.4 8E-12 2.7E-16 119.0 18.7 266 30-357 47-366 (368)
222 1mda_H Methylamine dehydrogena 99.4 9.2E-12 3.1E-16 118.5 18.8 273 71-389 47-356 (368)
223 2ghs_A AGR_C_1268P; regucalcin 99.4 7.5E-10 2.6E-14 105.1 31.9 224 95-368 51-292 (326)
224 3q7m_A Lipoprotein YFGL, BAMB; 99.4 5.9E-10 2E-14 108.5 29.5 301 18-375 52-375 (376)
225 1kb0_A Quinohemoprotein alcoho 99.4 2.2E-10 7.7E-15 119.5 26.8 324 19-365 77-537 (677)
226 2qe8_A Uncharacterized protein 99.3 5.6E-11 1.9E-15 113.9 19.8 265 8-330 17-314 (343)
227 1yiq_A Quinohemoprotein alcoho 99.3 2.3E-10 8E-15 119.6 25.9 292 60-389 70-515 (689)
228 1yiq_A Quinohemoprotein alcoho 99.3 2.9E-10 9.8E-15 119.0 25.5 322 19-364 70-534 (689)
229 1kb0_A Quinohemoprotein alcoho 99.3 1.1E-10 3.8E-15 121.8 22.3 293 60-389 77-517 (677)
230 4a2l_A BT_4663, two-component 99.2 2.2E-07 7.4E-12 99.8 42.4 319 10-377 175-525 (795)
231 3q7m_A Lipoprotein YFGL, BAMB; 99.2 1.1E-08 3.8E-13 99.4 28.9 269 59-388 52-346 (376)
232 3hxj_A Pyrrolo-quinoline quino 99.2 2.4E-10 8.3E-15 109.0 16.8 299 12-377 24-323 (330)
233 4a2l_A BT_4663, two-component 99.2 8.4E-07 2.9E-11 95.2 45.7 320 7-377 214-570 (795)
234 2ece_A 462AA long hypothetical 99.2 2.3E-08 7.8E-13 95.4 28.9 235 102-366 93-399 (462)
235 1fwx_A Nitrous oxide reductase 99.1 2.1E-08 7.1E-13 99.3 26.6 243 102-381 99-433 (595)
236 2ece_A 462AA long hypothetical 99.1 9.3E-09 3.2E-13 98.1 22.9 238 55-325 88-399 (462)
237 1npe_A Nidogen, entactin; glyc 99.1 1.4E-07 4.7E-12 86.6 29.6 249 61-360 2-263 (267)
238 1fwx_A Nitrous oxide reductase 99.1 1.7E-09 5.7E-14 107.0 16.3 278 106-389 17-381 (595)
239 1npe_A Nidogen, entactin; glyc 99.0 6.6E-07 2.2E-11 82.1 30.3 216 169-411 37-260 (267)
240 2hz6_A Endoplasmic reticulum t 99.0 9.8E-11 3.4E-15 113.1 4.3 220 18-285 8-238 (369)
241 3v9f_A Two-component system se 99.0 4.7E-06 1.6E-10 89.3 40.7 328 8-377 163-523 (781)
242 3hxj_A Pyrrolo-quinoline quino 99.0 9E-09 3.1E-13 98.0 17.2 265 55-387 26-291 (330)
243 3v9f_A Two-component system se 99.0 3.9E-06 1.3E-10 89.9 39.3 322 7-377 257-610 (781)
244 2hz6_A Endoplasmic reticulum t 99.0 4.9E-11 1.7E-15 115.2 0.8 188 178-387 8-200 (369)
245 2fp8_A Strictosidine synthase; 99.0 1.7E-07 5.9E-12 88.7 24.7 245 49-338 19-314 (322)
246 1kv9_A Type II quinohemoprotei 99.0 1.6E-07 5.6E-12 97.8 26.5 324 19-366 66-520 (668)
247 2fp8_A Strictosidine synthase; 99.0 1.9E-07 6.7E-12 88.3 24.5 235 8-284 19-314 (322)
248 1kv9_A Type II quinohemoprotei 99.0 1.3E-07 4.5E-12 98.6 24.6 292 60-389 66-498 (668)
249 2ad6_A Methanol dehydrogenase 98.9 2.8E-07 9.7E-12 94.0 25.0 319 19-365 62-524 (571)
250 2ad6_A Methanol dehydrogenase 98.9 4E-07 1.4E-11 92.8 25.4 291 60-389 62-504 (571)
251 2iwa_A Glutamine cyclotransfer 98.9 3.1E-07 1.1E-11 82.3 21.6 193 50-284 22-238 (266)
252 2iwa_A Glutamine cyclotransfer 98.9 2.5E-07 8.7E-12 82.9 20.6 192 168-377 21-236 (266)
253 1w6s_A Methanol dehydrogenase 98.8 1.8E-06 6.2E-11 87.9 27.5 319 19-363 62-531 (599)
254 1w6s_A Methanol dehydrogenase 98.8 2.4E-06 8.4E-11 87.0 28.1 293 60-389 62-513 (599)
255 1k3i_A Galactose oxidase precu 98.8 2E-07 6.9E-12 97.5 20.8 272 53-367 190-530 (656)
256 2p4o_A Hypothetical protein; p 98.8 4.6E-06 1.6E-10 78.1 27.0 237 168-424 32-278 (306)
257 3nol_A Glutamine cyclotransfer 98.8 4.6E-07 1.6E-11 80.1 18.4 183 170-367 45-244 (262)
258 2p4o_A Hypothetical protein; p 98.8 6.2E-06 2.1E-10 77.2 27.4 229 49-327 32-278 (306)
259 1flg_A Protein (quinoprotein e 98.8 4.6E-06 1.6E-10 85.1 28.2 325 20-364 69-545 (582)
260 1flg_A Protein (quinoprotein e 98.7 8.7E-06 3E-10 83.1 28.7 294 61-389 69-526 (582)
261 3nol_A Glutamine cyclotransfer 98.7 2.5E-06 8.5E-11 75.4 20.3 182 49-273 43-245 (262)
262 3nok_A Glutaminyl cyclase; bet 98.7 1.4E-06 4.7E-11 77.0 18.6 180 49-272 55-254 (268)
263 3tc9_A Hypothetical hydrolase; 98.7 1.2E-05 4.3E-10 78.8 26.7 238 8-282 137-429 (430)
264 1k3i_A Galactose oxidase precu 98.6 8.4E-07 2.9E-11 92.7 18.4 276 11-326 189-530 (656)
265 3v64_C Agrin; beta propeller, 98.6 5E-05 1.7E-09 72.2 29.1 240 7-286 33-278 (349)
266 3nok_A Glutaminyl cyclase; bet 98.6 2.9E-06 9.9E-11 75.0 17.4 182 168-367 55-254 (268)
267 3s94_A LRP-6, low-density lipo 98.6 0.0004 1.4E-08 71.3 36.1 342 8-411 84-488 (619)
268 3qqz_A Putative uncharacterize 98.6 1.8E-05 6.1E-10 70.5 22.5 206 165-376 24-251 (255)
269 3mbr_X Glutamine cyclotransfer 98.6 9.7E-06 3.3E-10 71.1 20.1 185 166-367 19-223 (243)
270 3s94_A LRP-6, low-density lipo 98.6 0.00068 2.3E-08 69.6 37.1 320 9-377 41-422 (619)
271 3p5b_L Low density lipoprotein 98.6 0.00015 5.2E-09 70.3 30.8 231 21-286 85-323 (400)
272 3v65_B Low-density lipoprotein 98.6 5.9E-05 2E-09 72.9 27.3 238 9-286 78-321 (386)
273 1ijq_A LDL receptor, low-densi 98.5 0.00034 1.2E-08 65.5 31.3 203 168-386 30-245 (316)
274 3mbr_X Glutamine cyclotransfer 98.5 4.6E-05 1.6E-09 66.8 23.2 194 206-424 18-223 (243)
275 3v64_C Agrin; beta propeller, 98.5 0.00023 7.8E-09 67.7 30.3 203 169-387 74-283 (349)
276 1ijq_A LDL receptor, low-densi 98.5 0.00023 8E-09 66.6 29.5 230 21-286 3-241 (316)
277 3tc9_A Hypothetical hydrolase; 98.5 4.4E-05 1.5E-09 74.9 24.9 154 50-239 138-301 (430)
278 3qqz_A Putative uncharacterize 98.5 0.00013 4.3E-09 65.0 24.8 209 5-237 24-251 (255)
279 4a0p_A LRP6, LRP-6, low-densit 98.5 0.002 7E-08 66.2 43.8 359 8-387 123-557 (628)
280 3v65_B Low-density lipoprotein 98.5 0.00013 4.5E-09 70.4 27.2 204 168-387 116-326 (386)
281 4hw6_A Hypothetical protein, I 98.5 0.00011 3.7E-09 72.1 26.8 238 8-282 139-432 (433)
282 3p5b_L Low density lipoprotein 98.4 0.0006 2E-08 66.1 31.1 205 168-388 112-329 (400)
283 2xbg_A YCF48-like protein; pho 98.4 0.001 3.5E-08 62.5 31.9 276 48-376 35-320 (327)
284 2xe4_A Oligopeptidase B; hydro 98.4 2.1E-05 7.3E-10 83.3 21.8 155 94-283 175-354 (751)
285 2xe4_A Oligopeptidase B; hydro 98.4 2.9E-05 9.8E-10 82.3 21.9 198 169-376 175-398 (751)
286 4hw6_A Hypothetical protein, I 98.4 5.5E-05 1.9E-09 74.1 22.2 245 94-377 140-432 (433)
287 3ei3_A DNA damage-binding prot 98.4 0.0062 2.1E-07 67.1 44.2 344 7-410 553-978 (1158)
288 2xbg_A YCF48-like protein; pho 98.4 0.00097 3.3E-08 62.7 29.9 274 7-335 35-320 (327)
289 3ei3_A DNA damage-binding prot 98.4 0.0055 1.9E-07 67.5 39.3 324 9-384 515-918 (1158)
290 3sov_A LRP-6, low-density lipo 98.3 0.00046 1.6E-08 64.4 26.7 228 21-286 6-241 (318)
291 4a0p_A LRP6, LRP-6, low-densit 98.3 0.0044 1.5E-07 63.7 42.9 195 9-240 38-238 (628)
292 3amr_A 3-phytase; beta-propell 98.3 0.00051 1.7E-08 63.5 25.7 192 19-249 40-272 (355)
293 3sov_A LRP-6, low-density lipo 98.3 0.00044 1.5E-08 64.6 26.0 233 62-343 6-244 (318)
294 3m0c_C LDL receptor, low-densi 98.2 0.0014 4.8E-08 68.9 30.1 240 10-286 387-635 (791)
295 3amr_A 3-phytase; beta-propell 98.2 0.0007 2.4E-08 62.6 23.5 198 178-387 39-272 (355)
296 3kya_A Putative phosphatase; s 98.1 0.0024 8.3E-08 62.6 26.2 252 9-285 140-477 (496)
297 2ism_A Putative oxidoreductase 98.1 0.0018 6.1E-08 61.5 25.0 239 9-271 32-333 (352)
298 3m0c_C LDL receptor, low-densi 98.1 0.0035 1.2E-07 66.0 29.1 202 168-386 424-639 (791)
299 3kya_A Putative phosphatase; s 98.1 0.0011 3.7E-08 65.1 23.1 247 95-377 141-474 (496)
300 2ism_A Putative oxidoreductase 98.0 0.0018 6.1E-08 61.5 23.1 239 48-325 30-333 (352)
301 1n7d_A LDL receptor, low-densi 97.9 3.4E-05 1.2E-09 80.6 10.8 225 28-286 385-617 (699)
302 3a9g_A Putative uncharacterize 97.9 0.0061 2.1E-07 57.8 25.3 235 48-325 28-330 (354)
303 3a9g_A Putative uncharacterize 97.9 0.0067 2.3E-07 57.5 25.5 236 9-271 30-330 (354)
304 2p9w_A MAL S 1 allergenic prot 97.9 0.0025 8.5E-08 58.4 20.8 202 169-377 14-264 (334)
305 2xzh_A Clathrin heavy chain 1; 97.9 0.014 4.6E-07 53.0 29.9 263 68-377 47-331 (365)
306 2p9w_A MAL S 1 allergenic prot 97.7 0.0017 5.8E-08 59.5 17.0 167 208-377 12-214 (334)
307 1n7d_A LDL receptor, low-densi 97.7 0.0001 3.5E-09 77.0 9.8 203 168-386 406-621 (699)
308 2vpj_A Kelch-like protein 12; 97.7 0.006 2.1E-07 56.5 20.8 232 17-286 13-281 (301)
309 2g8s_A Glucose/sorbosone dehyd 97.7 0.02 6.8E-07 54.3 24.3 69 253-330 271-347 (353)
310 2g8s_A Glucose/sorbosone dehyd 97.6 0.013 4.5E-07 55.5 22.8 104 9-112 19-149 (353)
311 3sre_A PON1, serum paraoxonase 97.6 0.018 6.2E-07 54.0 23.1 191 50-273 51-287 (355)
312 1bpo_A Protein (clathrin); cla 97.6 0.047 1.6E-06 51.7 31.5 263 68-377 46-330 (494)
313 3das_A Putative oxidoreductase 97.5 0.058 2E-06 50.3 27.3 251 43-325 26-326 (347)
314 2xn4_A Kelch-like protein 2; s 97.5 0.012 4E-07 54.5 19.7 230 18-286 15-279 (302)
315 3ii7_A Kelch-like protein 7; p 97.5 0.012 3.9E-07 54.7 19.5 230 19-286 12-275 (306)
316 2vpj_A Kelch-like protein 12; 97.5 0.014 4.9E-07 53.9 20.1 150 178-342 112-283 (301)
317 1bpo_A Protein (clathrin); cla 97.4 0.091 3.1E-06 49.8 29.8 202 171-389 69-299 (494)
318 1cru_A Protein (soluble quinop 97.4 0.11 3.8E-06 50.9 26.1 64 48-111 26-98 (454)
319 3ii7_A Kelch-like protein 7; p 97.4 0.061 2.1E-06 49.7 23.5 233 61-343 13-278 (306)
320 3sre_A PON1, serum paraoxonase 97.4 0.063 2.1E-06 50.4 23.1 193 9-237 51-296 (355)
321 2xn4_A Kelch-like protein 2; s 97.4 0.028 9.6E-07 51.9 20.8 185 178-377 61-275 (302)
322 3ott_A Two-component system se 97.3 0.26 8.8E-06 52.3 44.4 324 8-377 146-501 (758)
323 3s25_A Hypothetical 7-bladed b 97.3 0.11 3.8E-06 47.6 28.2 175 172-377 108-292 (302)
324 2xzh_A Clathrin heavy chain 1; 97.3 0.11 3.7E-06 47.3 29.2 236 12-290 71-339 (365)
325 3ott_A Two-component system se 97.2 0.29 9.8E-06 51.9 36.5 314 7-377 21-351 (758)
326 1zgk_A Kelch-like ECH-associat 97.2 0.036 1.2E-06 51.4 20.1 151 178-343 121-293 (308)
327 3das_A Putative oxidoreductase 97.2 0.13 4.6E-06 47.9 25.4 249 9-271 33-326 (347)
328 4asc_A Kelch repeat and BTB do 97.2 0.025 8.6E-07 52.6 18.7 226 21-286 7-280 (315)
329 4asc_A Kelch repeat and BTB do 97.2 0.047 1.6E-06 50.8 20.5 107 178-286 98-224 (315)
330 1zgk_A Kelch-like ECH-associat 97.2 0.027 9.2E-07 52.2 18.7 233 15-286 21-290 (308)
331 3sbq_A Nitrous-oxide reductase 97.0 0.31 1.1E-05 47.8 24.4 130 253-386 323-484 (638)
332 3s25_A Hypothetical 7-bladed b 97.0 0.051 1.7E-06 49.9 17.7 181 176-387 22-223 (302)
333 2woz_A Kelch repeat and BTB do 96.9 0.14 4.7E-06 47.6 20.9 107 178-286 109-234 (318)
334 2woz_A Kelch repeat and BTB do 96.9 0.054 1.9E-06 50.4 18.0 227 20-286 17-290 (318)
335 3pbp_A Nucleoporin NUP82; beta 96.8 0.07 2.4E-06 50.5 16.8 151 218-373 30-207 (452)
336 3pbp_A Nucleoporin NUP82; beta 96.8 0.042 1.4E-06 52.0 15.3 109 169-279 67-208 (452)
337 1tl2_A L10, protein (tachylect 96.7 0.016 5.6E-07 49.3 10.7 104 8-117 41-157 (236)
338 2uvk_A YJHT; unknown function, 96.7 0.084 2.9E-06 50.1 17.4 108 178-287 200-346 (357)
339 2uvk_A YJHT; unknown function, 96.4 0.26 8.8E-06 46.6 19.3 193 178-384 65-347 (357)
340 1tl2_A L10, protein (tachylect 96.4 0.026 8.8E-07 48.1 10.0 150 168-330 41-203 (236)
341 1cru_A Protein (soluble quinop 96.2 0.27 9.1E-06 48.2 18.3 111 210-325 28-162 (454)
342 2be1_A Serine/threonine-protei 96.2 0.055 1.9E-06 50.2 12.5 198 104-342 10-236 (339)
343 2zwa_A Leucine carboxyl methyl 96.2 0.34 1.2E-05 50.5 19.8 196 58-286 396-638 (695)
344 1xi4_A Clathrin heavy chain; a 96.2 0.21 7E-06 55.0 17.8 202 171-389 69-299 (1630)
345 1xi4_A Clathrin heavy chain; a 96.1 0.33 1.1E-05 53.5 19.3 263 68-377 46-330 (1630)
346 3sbq_A Nitrous-oxide reductase 95.8 1.2 4.2E-05 43.7 19.6 261 106-377 72-407 (638)
347 2be1_A Serine/threonine-protei 94.9 0.28 9.6E-06 45.5 11.9 109 20-131 11-138 (339)
348 3b7f_A Glycosyl hydrolase, BNR 94.4 3.6 0.00012 39.3 26.9 178 169-356 178-391 (394)
349 2zwa_A Leucine carboxyl methyl 93.8 1.4 4.6E-05 46.0 15.9 193 177-377 396-634 (695)
350 2wg3_C Hedgehog-interacting pr 93.7 5.7 0.00019 38.8 27.2 106 9-114 15-160 (463)
351 3b7f_A Glycosyl hydrolase, BNR 92.8 6.8 0.00023 37.3 29.8 217 169-410 116-391 (394)
352 2wg3_C Hedgehog-interacting pr 89.6 12 0.00041 36.4 16.0 116 253-369 14-160 (463)
353 3qhy_B Beta-lactamase inhibito 89.0 12 0.00042 33.5 16.9 181 169-378 64-246 (282)
354 1suu_A DNA gyrase subunit A; t 87.2 17 0.00059 33.1 21.2 194 177-377 6-230 (312)
355 1zi0_A DNA gyrase subunit A; b 87.0 18 0.0006 33.0 21.1 194 177-377 1-225 (307)
356 3qhy_B Beta-lactamase inhibito 81.3 30 0.001 31.0 14.3 221 50-337 25-246 (282)
357 4hvt_A Ritya.17583.B, post-pro 80.4 58 0.002 33.7 21.7 104 228-342 318-434 (711)
358 3uc1_A DNA gyrase subunit A; D 80.3 35 0.0012 31.3 23.4 156 178-337 108-279 (327)
359 3kci_A Probable E3 ubiquitin-p 79.9 41 0.0014 31.7 31.3 206 170-382 107-349 (389)
360 4gq2_M Nucleoporin NUP120; bet 74.8 35 0.0012 36.9 13.6 71 306-377 236-316 (950)
361 3f7f_A Nucleoporin NUP120; nuc 73.3 7.7 0.00026 39.7 7.4 34 554-587 226-259 (729)
362 3zwu_A Alkaline phosphatase PH 72.1 67 0.0023 32.3 13.9 58 307-365 477-548 (592)
363 4hvt_A Ritya.17583.B, post-pro 71.7 98 0.0034 32.0 21.1 94 187-282 318-429 (711)
364 3q6k_A 43.2 kDa salivary prote 69.7 74 0.0025 29.8 20.0 124 208-337 151-306 (381)
365 4gq2_M Nucleoporin NUP120; bet 67.2 92 0.0031 33.6 14.7 38 94-131 237-274 (950)
366 1suu_A DNA gyrase subunit A; t 62.2 92 0.0031 28.2 27.1 194 16-238 5-230 (312)
367 4a9v_A PHOX; hydrolase, beta-p 60.2 1.4E+02 0.0048 29.7 13.9 59 306-365 476-548 (592)
368 1zi0_A DNA gyrase subunit A; b 57.7 1.1E+02 0.0037 27.6 28.3 238 17-283 1-277 (307)
369 1sqj_A OXG-RCBH, oligoxylogluc 56.0 2E+02 0.0069 30.2 25.2 60 7-66 14-82 (789)
370 3kci_A Probable E3 ubiquitin-p 53.8 1.4E+02 0.005 27.9 27.2 199 60-283 62-293 (389)
371 3q6k_A 43.2 kDa salivary prote 49.9 1.7E+02 0.0057 27.4 22.8 245 9-270 27-341 (381)
372 4fhn_B Nucleoporin NUP120; pro 49.0 65 0.0022 35.7 10.0 37 349-386 239-275 (1139)
373 1wp5_A Topoisomerase IV; broke 46.9 1.7E+02 0.0058 26.6 24.7 203 58-283 3-225 (323)
374 4fhn_B Nucleoporin NUP120; pro 46.4 48 0.0016 36.7 8.4 38 307-345 239-276 (1139)
375 3no0_A DNA gyrase subunit A; D 46.3 1.6E+02 0.0053 26.1 23.0 203 169-377 25-245 (276)
376 3no0_A DNA gyrase subunit A; D 44.3 1.7E+02 0.0058 25.9 26.0 205 48-284 23-247 (276)
377 4a9v_A PHOX; hydrolase, beta-p 43.8 93 0.0032 31.0 8.9 59 168-226 476-548 (592)
378 1wp5_A Topoisomerase IV; broke 43.6 1.9E+02 0.0065 26.3 25.7 239 17-283 3-277 (323)
379 1zvt_A Topoisomerase IV subuni 43.0 1.7E+02 0.0058 25.5 13.9 148 222-377 4-162 (256)
380 3l6v_A GYRA, DNA gyrase subuni 42.8 2.1E+02 0.0072 26.6 28.5 207 57-286 4-268 (370)
381 3l6v_A GYRA, DNA gyrase subuni 42.8 2.1E+02 0.0073 26.6 28.5 240 15-283 3-316 (370)
382 3f7f_A Nucleoporin NUP120; nuc 40.4 2E+02 0.0067 29.7 10.9 35 308-345 224-258 (729)
383 3uc1_A DNA gyrase subunit A; D 39.3 2.2E+02 0.0076 25.9 27.4 237 19-284 3-280 (327)
384 1sqj_A OXG-RCBH, oligoxylogluc 38.8 3.7E+02 0.012 28.2 24.3 156 167-330 14-194 (789)
385 3zwu_A Alkaline phosphatase PH 38.6 1.1E+02 0.0036 30.9 8.6 58 169-226 477-548 (592)
386 3mwp_A Nucleoprotein; structur 35.4 8.9 0.0003 35.6 0.3 18 564-581 162-179 (577)
No 1
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=2.2e-59 Score=488.54 Aligned_cols=511 Identities=14% Similarity=0.194 Sum_probs=398.5
Q ss_pred ccCCCCCCcEEEeCCCCcEEEEEeCCCcEEEEcCCCceeEeeccCCcceEEEEEeecCCEEEEecCCCeEEEEeecccCc
Q psy710 3 RHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGVDAHVRHETDAAVIQMQFLTNEGALITATADDSLHLWNFRQKRP 82 (591)
Q Consensus 3 ~~gh~~~v~~~~~spdg~~la~g~~dg~i~lw~~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~~~d~~i~vw~~~~~~~ 82 (591)
..||.+.|++++|||||++||+|+.|+.|+|||.+++.+..+.+|...|.+++|+||+++|++++.|++|++||.. +
T Consensus 12 L~GH~~~V~~~a~spdg~~las~~~d~~v~iWd~~~~~~~~l~gh~~~V~~l~fspdg~~las~~~d~~i~vWd~~-~-- 88 (577)
T 2ymu_A 12 LEAHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRN-G-- 88 (577)
T ss_dssp ECCCSSCEEEEEECTTSSCEEEEETTSEEEEECTTSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETT-S--
T ss_pred ECCCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCCCEEEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECC-C--
Confidence 3699999999999999999999999999999998898999999999999999999999999999999999999964 3
Q ss_pred eeeeEEEeeccceEEEEeeCCceEEEEEeCCCcEEEEEeeeeeeeceeccccccccc-CCCCCCCceecc--------CC
Q psy710 83 EIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDV-CMKTHPGPIIHL--------SD 153 (591)
Q Consensus 83 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--------~~ 153 (591)
+.+..+.+|...|.+++|+|++++|++++.|+.+++|+....... ....+...+.. .+.++....... ..
T Consensus 89 ~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (577)
T 2ymu_A 89 QLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQ-TLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWN 167 (577)
T ss_dssp CEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCCEEE-EECCCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred CEEEEEECCCCCEEEEEECCCCCEEEEEcCCCceeecccccceee-eccCCCCceeeeeeecCCccceecccccceeccc
Confidence 468889999999999999999999999999999999997654332 22222222211 123333322111 11
Q ss_pred CCcCcceeeeccCCCCceEEEECCCCCEEEEEeCCCcEEEeCCCCeEEEEeccCCCcEEEEEEEcCCceEEEEeCCCcEE
Q psy710 154 NPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGVDAHVRHETDAAVIQMQFLTNEGALITATADDSLH 233 (591)
Q Consensus 154 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~ 233 (591)
..... ......+...+.+++++|+++++++++.|+.|++||...........+...|.+++|+|++++|++++.|+.|+
T Consensus 168 ~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~w~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~i~ 246 (577)
T 2ymu_A 168 RNGQL-LQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVK 246 (577)
T ss_dssp TTSCE-EEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEE
T ss_pred cceee-eeeccCCCcceeeeeecCCCCEEEEEcCCCEEEEEeCCCcEEEEEecCCCCEEEEEECCCCCEEEEEeCCCEEE
Confidence 11111 22234678889999999999999999999999999987776666666778999999999999999999999999
Q ss_pred EEEccCCCcceEEeeeeccccEEEEEecCCCCEEEEEeCCccEEEEEccCccccceeeehhhhccccccCCCCCeEEEec
Q psy710 234 LWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSD 313 (591)
Q Consensus 234 ~wd~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 313 (591)
+||... +.+..+.+|...|.+++|+|+++.+++++.|+.|++|+...... ..+.+|...|.+++|
T Consensus 247 ~w~~~~---~~~~~~~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~~~~~------------~~~~~h~~~v~~~~~ 311 (577)
T 2ymu_A 247 LWNRNG---QLLQTLTGHSSSVNGVAFRPDGQTIASASDDKTVKLWNRNGQLL------------QTLTGHSSSVWGVAF 311 (577)
T ss_dssp EECTTS---CEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSCEE------------EEECCCSSCEEEEEE
T ss_pred EEeCCC---CEEEEEecCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeCCCcEE------------EEEecCCCCeEEEEE
Confidence 999654 57788899999999999999999999999999999999754322 256789999999999
Q ss_pred CCCCCCeEEEEEcCCEEEEEecccceEEEEeccCCCeeEEEEeecCCEEEEEecCCcEEEEecCCCCCceeeeccccccc
Q psy710 314 NPLDPSKLLLAYETGLVVHWDLKLKRAEFRWQCSEPIKSVCWHYEGKQFLCSHTDGTISTWAVRPLAKPVSVNQPHIKTN 393 (591)
Q Consensus 314 sp~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~g~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~ 393 (591)
+| ++++|++++.|+.|++||.....+.....|...|.+++|+|++++|++++.||.|++||.. ++.+..+..|
T Consensus 312 ~~-~~~~l~t~~~d~~i~~w~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~~--~~~~~~~~~~---- 384 (577)
T 2ymu_A 312 SP-DGQTIASASDDKTVKLWNRNGQHLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRN--GQLLQTLTGH---- 384 (577)
T ss_dssp CT-TSSEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETT--CCEEEEEECC----
T ss_pred CC-CCCEEEEEeCCCeEEEEeCCCCeeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcCC--CCEEEEecCC----
Confidence 99 9999999999999999999888877777799999999999999999999999999999965 7888889999
Q ss_pred CCCCCCCCCcceEEEEeecCCCCcEEEEECCccCCCCCCCCeEEEEe--cceEEEE-ecCcceeEEEEcCCCCCcCCCCC
Q psy710 394 KDGKLEQCKPIQKVEWKHSRSGEGFVIFSGGLTYDKAGRSPSISVMH--NKTTTVL-EMEHNVVDFVTLCESPYICEMQE 470 (591)
Q Consensus 394 ~~~~~~~~~~i~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 470 (591)
..+|.+++|+| ++.+|++++.+. .+.++. ++....+ .....+..+...|+
T Consensus 385 -------~~~v~~~~~s~----dg~~l~~~~~d~-------~v~~~~~~~~~~~~~~~~~~~v~~~~~s~d--------- 437 (577)
T 2ymu_A 385 -------SSSVRGVAFSP----DGQTIASASDDK-------TVKLWNRNGQLLQTLTGHSSSVWGVAFSPD--------- 437 (577)
T ss_dssp -------SSCEEEEEECT----TSSCEEEEETTS-------EEEEECTTCCEEEEEECCSSCEEEEEECTT---------
T ss_pred -------CCCeEEEEECC----CCCEEEEEeCCC-------EEEEEeCCCCEEEEecCCCCCeEEEEECCC---------
Confidence 88999999987 445677776443 344443 2222222 22345666655543
Q ss_pred ceEEEEEecCC-eEEEecCCCCCCcccCCceeeeecCCeeeeeecccCCCChhhhhhhccccccccccCCCCCcccc---
Q psy710 471 PYAIVVLLHND-LVVIDLLTPGFPCFENPYPMDIHESPVTCCVYLADCPSDLIPAFYSVGARGASKRTGFSEKEWPL--- 546 (591)
Q Consensus 471 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~--- 546 (591)
...++....++ +++|++.. .....+..|..+++++.|.+++. ++.+++ .+...+.|+.
T Consensus 438 ~~~l~~~~~d~~v~~w~~~~------~~~~~~~~~~~~v~~~~~spd~~------~las~~------~d~~i~iw~~~~~ 499 (577)
T 2ymu_A 438 DQTIASASDDKTVKLWNRNG------QLLQTLTGHSSSVRGVAFSPDGQ------TIASAS------DDKTVKLWNRNGQ 499 (577)
T ss_dssp SSEEEEEETTSEEEEEETTS------CEEEEEECCSSCEEEEEECTTSC------EEEEEE------TTSEEEEEETTSC
T ss_pred CCEEEEEcCCCEEEEEECCC------CEEEEEcCCCCCEEEEEEcCCCC------EEEEEe------CCCEEEEEcCCCC
Confidence 33455555666 99999754 22345567899999999977632 111211 1222333432
Q ss_pred --------CCCccCCCCCCcceEEEEEecCCcEEEEeCCCCceeEEEE
Q psy710 547 --------SGGEWSPTSCSYYEVILTGHADGSVKFWDASAGNLQVLYK 586 (591)
Q Consensus 547 --------~gg~~~~~~~~~~~~l~t~~~Dg~vr~Wd~~~~~l~~~~~ 586 (591)
.+.+..++|+||+++|+|++.||+||+||+.. ++...+.
T Consensus 500 ~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~~~-~~~~~~~ 546 (577)
T 2ymu_A 500 LLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNG-QLLQTLT 546 (577)
T ss_dssp EEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTS-CEEEEEE
T ss_pred EEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeCCC-CEEEEEc
Confidence 23345568899999999999999999999754 4433333
No 2
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=1.9e-56 Score=466.33 Aligned_cols=471 Identities=14% Similarity=0.224 Sum_probs=379.6
Q ss_pred cCCCCCCcEEEeCCCCcEEEEEeCCCcEEEEcCCCceeEeeccCCcceEEEEEeecCCEEEEecCCCeEEEEeecccCc-
Q psy710 4 HGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGVDAHVRHETDAAVIQMQFLTNEGALITATADDSLHLWNFRQKRP- 82 (591)
Q Consensus 4 ~gh~~~v~~~~~spdg~~la~g~~dg~i~lw~~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~~~d~~i~vw~~~~~~~- 82 (591)
.||.+.|++++|+|||++||+++.|++|+|||+++..+..+.+|...|.+++|+|++++|++++.|+.+++|+......
T Consensus 54 ~gh~~~V~~l~fspdg~~las~~~d~~i~vWd~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~~~~~~~~~~~~~ 133 (577)
T 2ymu_A 54 TGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQ 133 (577)
T ss_dssp ECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCCEEE
T ss_pred eCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCEEEEEECCCCCEEEEEECCCCCEEEEEcCCCceeecccccceee
Confidence 5899999999999999999999999999999999999999999999999999999999999999999999998643210
Q ss_pred -------------------------------------eeeeEEEeeccceEEEEeeCCceEEEEEeCCCcEEEEEeeeee
Q psy710 83 -------------------------------------EIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFT 125 (591)
Q Consensus 83 -------------------------------------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~ 125 (591)
........|...|.++.|+|+++.+++++.|+.|++||.. ++
T Consensus 134 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~w~~~-~~ 212 (577)
T 2ymu_A 134 TLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRN-GQ 212 (577)
T ss_dssp EECCCSSCEEEEEECTTSSCEEEEETTSEEEEECTTSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTT-SC
T ss_pred eccCCCCceeeeeeecCCccceecccccceeccccceeeeeeccCCCcceeeeeecCCCCEEEEEcCCCEEEEEeCC-Cc
Confidence 1122334566788999999999999999999999999854 33
Q ss_pred eeceecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCCCCEEEEEeCCCcEEEeCCCCeEEEEec
Q psy710 126 LSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGVDAHVRH 205 (591)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~ 205 (591)
....+ .+|...|.+++|+|++++|++++.|+.|++|+..........
T Consensus 213 ~~~~~---------------------------------~~~~~~v~~~~~s~dg~~l~~~~~d~~i~~w~~~~~~~~~~~ 259 (577)
T 2ymu_A 213 LLQTL---------------------------------TGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLT 259 (577)
T ss_dssp EEEEE---------------------------------ECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEEC
T ss_pred EEEEE---------------------------------ecCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCCCEEEEEe
Confidence 33322 256778999999999999999999999999998877666666
Q ss_pred cCCCcEEEEEEEcCCceEEEEeCCCcEEEEEccCCCcceEEeeeeccccEEEEEecCCCCEEEEEeCCccEEEEEccCcc
Q psy710 206 ETDAAVIQMQFLTNEGALITATADDSLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFT 285 (591)
Q Consensus 206 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~ 285 (591)
.+...|.+++|+|+++.|++++.|+.|++||... +.+..+.+|...|.+++|+|+++++++++.|+.|++||+....
T Consensus 260 ~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~~---~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~~ 336 (577)
T 2ymu_A 260 GHSSSVNGVAFRPDGQTIASASDDKTVKLWNRNG---QLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQH 336 (577)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTS---CEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSCE
T ss_pred cCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeCCC---cEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCe
Confidence 7788999999999999999999999999999754 4778889999999999999999999999999999999987654
Q ss_pred ccceeeehhhhccccccCCCCCeEEEecCCCCCCeEEEEEcCCEEEEEecccceEEEEeccCCCeeEEEEeecCCEEEEE
Q psy710 286 LSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKLLLAYETGLVVHWDLKLKRAEFRWQCSEPIKSVCWHYEGKQFLCS 365 (591)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~g~~l~s~ 365 (591)
.. .+.+|...+.+++|+| ++++|++++.|+.|++||...........|...|.+++|+|++++|+++
T Consensus 337 ~~------------~~~~~~~~v~~~~~s~-~g~~l~~~~~dg~v~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~ 403 (577)
T 2ymu_A 337 LQ------------TLTGHSSSVWGVAFSP-DGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASA 403 (577)
T ss_dssp EE------------EECCCSSCEEEEEECT-TSSEEEEEETTSEEEEEETTCCEEEEEECCSSCEEEEEECTTSSCEEEE
T ss_pred eE------------EEeCCCCCEEEEEECC-CCCEEEEEeCCCEEEEEcCCCCEEEEecCCCCCeEEEEECCCCCEEEEE
Confidence 42 5678999999999999 9999999999999999997655554555599999999999999999999
Q ss_pred ecCCcEEEEecCCCCCceeeecccccccCCCCCCCCCcceEEEEeecCCCCcEEEEECCccCCCCCCCCeEEEEe--cce
Q psy710 366 HTDGTISTWAVRPLAKPVSVNQPHIKTNKDGKLEQCKPIQKVEWKHSRSGEGFVIFSGGLTYDKAGRSPSISVMH--NKT 443 (591)
Q Consensus 366 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~--~~~ 443 (591)
+.|+.|++||.. ++.+..+..| ..+|.+++|+| ++.+|++++.+. .+.++. ++.
T Consensus 404 ~~d~~v~~~~~~--~~~~~~~~~~-----------~~~v~~~~~s~----d~~~l~~~~~d~-------~v~~w~~~~~~ 459 (577)
T 2ymu_A 404 SDDKTVKLWNRN--GQLLQTLTGH-----------SSSVWGVAFSP----DDQTIASASDDK-------TVKLWNRNGQL 459 (577)
T ss_dssp ETTSEEEEECTT--CCEEEEEECC-----------SSCEEEEEECT----TSSEEEEEETTS-------EEEEEETTSCE
T ss_pred eCCCEEEEEeCC--CCEEEEecCC-----------CCCeEEEEECC----CCCEEEEEcCCC-------EEEEEECCCCE
Confidence 999999999965 7888889999 88999999987 445677776543 344443 222
Q ss_pred EEEE-ecCcceeEEEEcCCCCCcCCCCCceEEEEEecCC-eEEEecCCCCCCcccCCceeeeecCCeeeeeecccCCCCh
Q psy710 444 TTVL-EMEHNVVDFVTLCESPYICEMQEPYAIVVLLHND-LVVIDLLTPGFPCFENPYPMDIHESPVTCCVYLADCPSDL 521 (591)
Q Consensus 444 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 521 (591)
...+ .....+..+...|+ ...++..+.++ +++|+... .....+..|..+|+++.|.+++.
T Consensus 460 ~~~~~~~~~~v~~~~~spd---------~~~las~~~d~~i~iw~~~~------~~~~~~~~h~~~v~~l~~s~dg~--- 521 (577)
T 2ymu_A 460 LQTLTGHSSSVRGVAFSPD---------GQTIASASDDKTVKLWNRNG------QLLQTLTGHSSSVRGVAFSPDGQ--- 521 (577)
T ss_dssp EEEEECCSSCEEEEEECTT---------SCEEEEEETTSEEEEEETTS------CEEEEEECCSSCEEEEEECTTSS---
T ss_pred EEEEcCCCCCEEEEEEcCC---------CCEEEEEeCCCEEEEEcCCC------CEEEEEeCCCCCEEEEEEcCCCC---
Confidence 2222 22346666666554 33455555666 99999643 23445668999999999987732
Q ss_pred hhhhhhccccccccccCCCCCcccc-----------CCCccCCCCCCcceEEEEEecCCcEEEEe
Q psy710 522 IPAFYSVGARGASKRTGFSEKEWPL-----------SGGEWSPTSCSYYEVILTGHADGSVKFWD 575 (591)
Q Consensus 522 ~~~~~~~~~~~~~~~~~~~~~~w~~-----------~gg~~~~~~~~~~~~l~t~~~Dg~vr~Wd 575 (591)
++.+++ .+...+.|++ .+.+..++|+||+++|+|++.||+||+||
T Consensus 522 ---~l~s~~------~dg~v~lwd~~~~~~~~~~~h~~~v~~~~fs~dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 522 ---TIASAS------DDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASSDKTVKLWN 577 (577)
T ss_dssp ---CEEEEE------TTSEEEEECTTSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred ---EEEEEE------CcCEEEEEeCCCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEeC
Confidence 112222 2333444443 23345568899999999999999999998
No 3
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=5.9e-56 Score=463.29 Aligned_cols=498 Identities=13% Similarity=0.143 Sum_probs=372.7
Q ss_pred cCCCCCCcEEEeCCCCcEEEEEeCCCcEEEEcCC-CceeEeeccCCcceEEEEEeecCCEEEEecCCCeEEEEeecccCc
Q psy710 4 HGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRP-GVDAHVRHETDAAVIQMQFLTNEGALITATADDSLHLWNFRQKRP 82 (591)
Q Consensus 4 ~gh~~~v~~~~~spdg~~la~g~~dg~i~lw~~~-~~~~~~~~~h~~~v~~l~~sp~~~~l~s~~~d~~i~vw~~~~~~~ 82 (591)
..+.+.+.+++|+|||++||+++ ++.|++|++. +.....+.+|...|++++|+|+|++||+++.|++|+|||+.+++.
T Consensus 15 ~~~~g~~~~~~~spdg~~l~~~~-~~~v~l~~~~~~~~~~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~ 93 (611)
T 1nr0_A 15 RTARGTAVVLGNTPAGDKIQYCN-GTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTH 93 (611)
T ss_dssp CCCTTCCCCCEECTTSSEEEEEE-TTEEEEEETTCSSCCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTC
T ss_pred CcccCceeEEeeCCCCCEEEeCC-CCEEEEecCCCcccCeEecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcc
Confidence 34677889999999999999987 5699999987 677888999999999999999999999999999999999976654
Q ss_pred eeeeEEEeeccceEEEEeeCCceEEEEEeCC----CcEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCc
Q psy710 83 EIVHSLKFQRERITYIHLPLQSKWLYVGTEK----GNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDP 158 (591)
Q Consensus 83 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (591)
.....+.+|.+.|.+++|+|+++.|++++.+ +.|++||. ++....+
T Consensus 94 ~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~--~~~~~~l---------------------------- 143 (611)
T 1nr0_A 94 ILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDT--GTSNGNL---------------------------- 143 (611)
T ss_dssp CEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTT--CCBCBCC----------------------------
T ss_pred eeeEeecccCCceEEEEECCCCCEEEEEECCCCceeEEEEeeC--CCCccee----------------------------
Confidence 5667888999999999999999999998865 47888874 3322222
Q ss_pred ceeeeccCCCCceEEEECCCCC-EEEEEeCCCcEEEeCCCCeEEEE-eccCCCcEEEEEEEcCCceEEEEeCCCcEEEEE
Q psy710 159 SKTFRHGFPYQPTAIAFDPIQK-LLAIGTKTGSLRLLGRPGVDAHV-RHETDAAVIQMQFLTNEGALITATADDSLHLWN 236 (591)
Q Consensus 159 ~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd 236 (591)
.+|...|.+++|+|++. .|++++.|+.|++||....++.. ...|...|.+++|+|++++|++++.|++|++||
T Consensus 144 -----~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd 218 (611)
T 1nr0_A 144 -----TGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYN 218 (611)
T ss_dssp -----CCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred -----cCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEE
Confidence 36788899999999986 69999999999999988776553 445677999999999999999999999999999
Q ss_pred ccCCCcceEEeee-------eccccEEEEEecCCCCEEEEEeCCccEEEEEccCccccceee------------------
Q psy710 237 FRQKRPEIVHSLK-------FQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYII------------------ 291 (591)
Q Consensus 237 ~~~~~~~~~~~~~-------~~~~~v~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~------------------ 291 (591)
+.++ +.+..+. +|.+.|.+++|+|++++|++++.|++|++||+.+++......
T Consensus 219 ~~~g--~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (611)
T 1nr0_A 219 GVDG--TKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQA 296 (611)
T ss_dssp TTTC--CEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSC
T ss_pred CCCC--cEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCE
Confidence 9887 5666664 799999999999999999999999999999998765432110
Q ss_pred -----------ehh---hhccccccCCCCCeEEEecCCCCCCeEEEEEcCCEEEEEecccceEEEEe--ccCCCeeEEEE
Q psy710 292 -----------NWN---KAIDVCMKTHPGPIIHLSDNPLDPSKLLLAYETGLVVHWDLKLKRAEFRW--QCSEPIKSVCW 355 (591)
Q Consensus 292 -----------~~~---~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~iwd~~~~~~~~~~--~~~~~v~~~~~ 355 (591)
.|+ ......+.+|...|.+++|+| ++++|++++.|+.|++||+.+++....+ .|...|.+++|
T Consensus 297 l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~sp-dg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~ 375 (611)
T 1nr0_A 297 LVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSA-DGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKT 375 (611)
T ss_dssp EEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEE
T ss_pred EEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeC-CCCEEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEE
Confidence 000 001234568999999999999 9999999999999999999999887765 38899999999
Q ss_pred eecCCEEEEEecCCcEEEEecCCCCCcee------eeccccc---ccCC-----------------C---CCCCCCcceE
Q psy710 356 HYEGKQFLCSHTDGTISTWAVRPLAKPVS------VNQPHIK---TNKD-----------------G---KLEQCKPIQK 406 (591)
Q Consensus 356 sp~g~~l~s~~~dg~i~vwd~~~~~~~~~------~~~~~~~---~~~~-----------------~---~~~~~~~i~~ 406 (591)
++++ .|++++.|+.+++|++.. +.... .+..+.. +... + .......+.+
T Consensus 376 s~~~-~l~s~s~d~~v~~w~~~~-~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~ 453 (611)
T 1nr0_A 376 TSKG-DLFTVSWDDHLKVVPAGG-SGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSC 453 (611)
T ss_dssp CTTS-CEEEEETTTEEEEECSSS-SSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEE
T ss_pred CCCC-cEEEEEcCCceEEeecCC-ccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeeecCCCceE
Confidence 9766 688999999999999873 22110 0000000 0000 0 0001356789
Q ss_pred EEEeecCCCCcEEEEECCccCCCCCCCCeEEEE--ecceE---EEEecCcceeEEEEcCCCCCcCCCCCceEEEEEecCC
Q psy710 407 VEWKHSRSGEGFVIFSGGLTYDKAGRSPSISVM--HNKTT---TVLEMEHNVVDFVTLCESPYICEMQEPYAIVVLLHND 481 (591)
Q Consensus 407 ~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~--~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 481 (591)
++|+| ++.+|++|+.+. .+.++ .+... ........|..+...|++ ..++....++
T Consensus 454 va~sp----dg~~lasgs~D~-------~v~lwd~~~~~~~~~~~~~h~~~v~~v~fspdg---------~~las~s~d~ 513 (611)
T 1nr0_A 454 VALSN----DKQFVAVGGQDS-------KVHVYKLSGASVSEVKTIVHPAEITSVAFSNNG---------AFLVATDQSR 513 (611)
T ss_dssp EEECT----TSCEEEEEETTS-------EEEEEEEETTEEEEEEEEECSSCEEEEEECTTS---------SEEEEEETTS
T ss_pred EEEeC----CCCEEEEeCCCC-------eEEEEEccCCceeeeeccCCCCceEEEEECCCC---------CEEEEEcCCC
Confidence 99987 567888888654 34443 22221 123345667777776643 3455555555
Q ss_pred -eEEEecCCCCCCcccCCceeeeecCCeeeeeecccCCCChhhhhhhccccccccccCCCCCccccC-------------
Q psy710 482 -LVVIDLLTPGFPCFENPYPMDIHESPVTCCVYLADCPSDLIPAFYSVGARGASKRTGFSEKEWPLS------------- 547 (591)
Q Consensus 482 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~------------- 547 (591)
+++|++.+.+-. ........|...|.++.|.+++. .+.+++ .+...+.|++.
T Consensus 514 ~v~~w~~~~~~~~--~~~~~~~~H~~~V~~v~fspdg~------~lasgs------~D~~v~lW~~~~~~~~~~~~~~~h 579 (611)
T 1nr0_A 514 KVIPYSVANNFEL--AHTNSWTFHTAKVACVSWSPDNV------RLATGS------LDNSVIVWNMNKPSDHPIIIKGAH 579 (611)
T ss_dssp CEEEEEGGGTTEE--SCCCCCCCCSSCEEEEEECTTSS------EEEEEE------TTSCEEEEETTCTTSCCEEETTSS
T ss_pred CEEEEEcCCCCce--eeeeeeeecccceeEEEECCCCC------EEEEEE------CCCcEEEEECCCcccccchhhccC
Confidence 999999762211 01112234999999999988732 122222 23333444332
Q ss_pred --CCccCCCCCCcceEEEEEecCCcEEEEeCC
Q psy710 548 --GGEWSPTSCSYYEVILTGHADGSVKFWDAS 577 (591)
Q Consensus 548 --gg~~~~~~~~~~~~l~t~~~Dg~vr~Wd~~ 577 (591)
+.+.+++|+|+++ |+||+.||+||+||+.
T Consensus 580 ~~~~v~~v~fs~d~~-l~s~~~D~~i~lW~~~ 610 (611)
T 1nr0_A 580 AMSSVNSVIWLNETT-IVSAGQDSNIKFWNVP 610 (611)
T ss_dssp TTSCEEEEEEEETTE-EEEEETTSCEEEEECC
T ss_pred cccCeeEEEEcCCCE-EEEecCCCCEEEEecc
Confidence 3344557899999 9999999999999984
No 4
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=6.6e-52 Score=432.71 Aligned_cols=428 Identities=12% Similarity=0.125 Sum_probs=337.4
Q ss_pred ccCCCCCCcEEEeCCCCcEEEEEeCCCcEEEEcCC---CceeEeeccCCcceEEEEEeecCCEEEEecCC----CeEEEE
Q psy710 3 RHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRP---GVDAHVRHETDAAVIQMQFLTNEGALITATAD----DSLHLW 75 (591)
Q Consensus 3 ~~gh~~~v~~~~~spdg~~la~g~~dg~i~lw~~~---~~~~~~~~~h~~~v~~l~~sp~~~~l~s~~~d----~~i~vw 75 (591)
..||...|++++|||||++||+|+.||+|+|||+. ......+.+|.++|.+++|+|++++|++++.+ +.|++|
T Consensus 55 ~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~w 134 (611)
T 1nr0_A 55 YTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLF 134 (611)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEET
T ss_pred ecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCCceeEEEEe
Confidence 35899999999999999999999999999999985 23345778999999999999999999988765 478888
Q ss_pred eecccCceeeeEEEeeccceEEEEeeCCce-EEEEEeCCCcEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCC
Q psy710 76 NFRQKRPEIVHSLKFQRERITYIHLPLQSK-WLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDN 154 (591)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (591)
|. + .....+.+|...|.+++|+|++. .|++++.|++|++||..++++...+.
T Consensus 135 d~--~--~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~----------------------- 187 (611)
T 1nr0_A 135 DT--G--TSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFG----------------------- 187 (611)
T ss_dssp TT--C--CBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEEC-----------------------
T ss_pred eC--C--CCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeec-----------------------
Confidence 84 3 24567889999999999999987 59999999999999988776655544
Q ss_pred CcCcceeeeccCCCCceEEEECCCCCEEEEEeCCCcEEEeCCCCeEEEEec--------cCCCcEEEEEEEcCCceEEEE
Q psy710 155 PLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGVDAHVRH--------ETDAAVIQMQFLTNEGALITA 226 (591)
Q Consensus 155 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~--------~~~~~v~~~~~~~~~~~l~~~ 226 (591)
+|...|.+++|+|++++|++++.|+.|++||..+++..... .|...|.+++|+|++++|+++
T Consensus 188 ----------~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~ 257 (611)
T 1nr0_A 188 ----------EHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASA 257 (611)
T ss_dssp ----------CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEE
T ss_pred ----------cccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEE
Confidence 67788999999999999999999999999998877665443 467899999999999999999
Q ss_pred eCCCcEEEEEccCCCc-----------------------------------------ceEEeeeeccccEEEEEecCCCC
Q psy710 227 TADDSLHLWNFRQKRP-----------------------------------------EIVHSLKFQRERITYIHLPLQSK 265 (591)
Q Consensus 227 ~~d~~i~~wd~~~~~~-----------------------------------------~~~~~~~~~~~~v~~~~~sp~~~ 265 (591)
+.|++|++||+++++. .....+.+|...|.+++|+|+++
T Consensus 258 s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~ 337 (611)
T 1nr0_A 258 SADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGK 337 (611)
T ss_dssp ETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSS
T ss_pred eCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCC
Confidence 9999999999986521 12234457888999999999999
Q ss_pred EEEEEeCCccEEEEEccCccccceeeehhhhccccccCCCCCeEEEecCCCCCCeEEEEEcCCEEEEEecccceE-----
Q psy710 266 WLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKLLLAYETGLVVHWDLKLKRA----- 340 (591)
Q Consensus 266 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~iwd~~~~~~----- 340 (591)
+|++++.|++|++||+.+++.. ......|...|.+++|++ ++ .+++++.|+.+++|++.++..
T Consensus 338 ~l~s~s~D~~v~~Wd~~~~~~~----------~~~~~~h~~~v~~~~~s~-~~-~l~s~s~d~~v~~w~~~~~~~~~~~~ 405 (611)
T 1nr0_A 338 TLFSADAEGHINSWDISTGISN----------RVFPDVHATMITGIKTTS-KG-DLFTVSWDDHLKVVPAGGSGVDSSKA 405 (611)
T ss_dssp EEEEEETTSCEEEEETTTCCEE----------ECSSCSCSSCEEEEEECT-TS-CEEEEETTTEEEEECSSSSSSCTTSC
T ss_pred EEEEEeCCCcEEEEECCCCcee----------eecccCCcceEEEEEECC-CC-cEEEEEcCCceEEeecCCccccccce
Confidence 9999999999999999987653 112367899999999998 64 788999999999999764211
Q ss_pred ------------------------------------EEEeccCCCeeEEEEeecCCEEEEEecCCcEEEEecCCCCCc--
Q psy710 341 ------------------------------------EFRWQCSEPIKSVCWHYEGKQFLCSHTDGTISTWAVRPLAKP-- 382 (591)
Q Consensus 341 ------------------------------------~~~~~~~~~v~~~~~sp~g~~l~s~~~dg~i~vwd~~~~~~~-- 382 (591)
...+.+...+.+++|+|||++||+++.|++|++||+. .++.
T Consensus 406 ~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~va~spdg~~lasgs~D~~v~lwd~~-~~~~~~ 484 (611)
T 1nr0_A 406 VANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLS-GASVSE 484 (611)
T ss_dssp CEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEEEE-TTEEEE
T ss_pred eeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeeecCCCceEEEEeCCCCEEEEeCCCCeEEEEEcc-CCceee
Confidence 1122355678999999999999999999999999998 4332
Q ss_pred eeeecccccccCCCCCCCCCcceEEEEeecCCCCcEEEEECCccCCCCCCCCeEEEEecce-EEE-----Ee-cCcceeE
Q psy710 383 VSVNQPHIKTNKDGKLEQCKPIQKVEWKHSRSGEGFVIFSGGLTYDKAGRSPSISVMHNKT-TTV-----LE-MEHNVVD 455 (591)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~-~~~-----~~-~~~~~~~ 455 (591)
+.. ..| ..+|.+++|+| ++.+|++++.+. .+.++.-.. ... +. ....|..
T Consensus 485 ~~~-~~h-----------~~~v~~v~fsp----dg~~las~s~d~-------~v~~w~~~~~~~~~~~~~~~~H~~~V~~ 541 (611)
T 1nr0_A 485 VKT-IVH-----------PAEITSVAFSN----NGAFLVATDQSR-------KVIPYSVANNFELAHTNSWTFHTAKVAC 541 (611)
T ss_dssp EEE-EEC-----------SSCEEEEEECT----TSSEEEEEETTS-------CEEEEEGGGTTEESCCCCCCCCSSCEEE
T ss_pred eec-cCC-----------CCceEEEEECC----CCCEEEEEcCCC-------CEEEEEcCCCCceeeeeeeeecccceeE
Confidence 233 567 78999999987 556888887554 344443221 111 11 2346666
Q ss_pred EEEcCCCCCcCCCCCceEEEEEecCC-eEEEecCCCCCCcccCC-ceeeee-cCCeeeeeeccc
Q psy710 456 FVTLCESPYICEMQEPYAIVVLLHND-LVVIDLLTPGFPCFENP-YPMDIH-ESPVTCCVYLAD 516 (591)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~ 516 (591)
+...|++ ..++..+.|+ +++|++..+.. .+ ..+..| ...|+++.|.++
T Consensus 542 v~fspdg---------~~lasgs~D~~v~lW~~~~~~~----~~~~~~~~h~~~~v~~v~fs~d 592 (611)
T 1nr0_A 542 VSWSPDN---------VRLATGSLDNSVIVWNMNKPSD----HPIIIKGAHAMSSVNSVIWLNE 592 (611)
T ss_dssp EEECTTS---------SEEEEEETTSCEEEEETTCTTS----CCEEETTSSTTSCEEEEEEEET
T ss_pred EEECCCC---------CEEEEEECCCcEEEEECCCccc----ccchhhccCcccCeeEEEEcCC
Confidence 6666543 3455555566 99999976421 12 334478 789999999876
No 5
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=2e-51 Score=466.08 Aligned_cols=479 Identities=16% Similarity=0.239 Sum_probs=385.8
Q ss_pred cCCCCCCcEEEeCCCCcEEEEEeCCCcEEEEcCC-CceeEeeccCCcceEEEEEeecCCEEEEecCCCeEEEEeecccCc
Q psy710 4 HGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRP-GVDAHVRHETDAAVIQMQFLTNEGALITATADDSLHLWNFRQKRP 82 (591)
Q Consensus 4 ~gh~~~v~~~~~spdg~~la~g~~dg~i~lw~~~-~~~~~~~~~h~~~v~~l~~sp~~~~l~s~~~d~~i~vw~~~~~~~ 82 (591)
.+|.+.|++++|+|+|++||+|+.||+|++||.. +..+..+.+|...|.+++|+|++++|++++.|++|++||+.+++
T Consensus 612 ~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~- 690 (1249)
T 3sfz_A 612 RPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGK- 690 (1249)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC-
T ss_pred ecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCc-
Confidence 5899999999999999999999999999999987 67788899999999999999999999999999999999999884
Q ss_pred eeeeEEEeeccceEEEEeeC--CceEEEEEeCCCcEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCcce
Q psy710 83 EIVHSLKFQRERITYIHLPL--QSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSK 160 (591)
Q Consensus 83 ~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (591)
.+..+.+|...|.+++|+| ++..+++++.|+.|++||+.+++....+.
T Consensus 691 -~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~----------------------------- 740 (1249)
T 3sfz_A 691 -LVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMF----------------------------- 740 (1249)
T ss_dssp -EEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEEC-----------------------------
T ss_pred -eEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheec-----------------------------
Confidence 7888999999999999999 55689999999999999999877655544
Q ss_pred eeeccCCCCceEEEECCCCCEEEEEeCCCcEEEeCCCCeEEEEecc--------------CCCcEEEEEEEcCCceEEEE
Q psy710 161 TFRHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGVDAHVRHE--------------TDAAVIQMQFLTNEGALITA 226 (591)
Q Consensus 161 ~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~--------------~~~~v~~~~~~~~~~~l~~~ 226 (591)
+|...|.+++|+|+++++++++.||.|++||+.......... ....+.+++|+|+++.++++
T Consensus 741 ----~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~ 816 (1249)
T 3sfz_A 741 ----GHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVA 816 (1249)
T ss_dssp ----CCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEE
T ss_pred ----CCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEE
Confidence 577889999999999999999999999999997765543221 13378899999999999988
Q ss_pred eCCCcEEEEEccCCCcceEEeee-eccccEEEEEecCCCCEEEEEeCCccEEEEEccCccccceeeehhhhccccccCCC
Q psy710 227 TADDSLHLWNFRQKRPEIVHSLK-FQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHP 305 (591)
Q Consensus 227 ~~d~~i~~wd~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (591)
+ ++.+.+||+.++ ..+..+. +|...+.+++|+|+++++++++.|+.|++||+.++.. ...+.+|.
T Consensus 817 ~-~~~v~~~d~~~~--~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~-----------~~~~~~h~ 882 (1249)
T 3sfz_A 817 A-KNKVLLFDIHTS--GLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLK-----------VADCRGHL 882 (1249)
T ss_dssp E-TTEEEEEETTTC--CEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEE-----------EEEECCCS
T ss_pred c-CCcEEEEEecCC--CceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCce-----------eeecCCCc
Confidence 7 589999999988 4555554 7889999999999999999999999999999998766 33678899
Q ss_pred CCeEEEecCCCCCCeEEEEEcCCEEEEEecccceE-----------------------------E---------EEeccC
Q psy710 306 GPIIHLSDNPLDPSKLLLAYETGLVVHWDLKLKRA-----------------------------E---------FRWQCS 347 (591)
Q Consensus 306 ~~v~~~~~sp~~~~~l~~~~~dg~i~iwd~~~~~~-----------------------------~---------~~~~~~ 347 (591)
..|.+++|+| ++++|++++.|+.|++||+.+... . ....+.
T Consensus 883 ~~v~~v~~sp-dg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 961 (1249)
T 3sfz_A 883 SWVHGVMFSP-DGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPE 961 (1249)
T ss_dssp SCEEEEEECT-TSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECC
T ss_pred cceEEEEECC-CCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEccc
Confidence 9999999999 999999999999999999764210 0 011135
Q ss_pred CCeeEEEEeecCCEEEEEecCCcEEEEecCCCCCceeeecccccccCCCCCCCCCcceEEEEeecCCCCcEEEEECCccC
Q psy710 348 EPIKSVCWHYEGKQFLCSHTDGTISTWAVRPLAKPVSVNQPHIKTNKDGKLEQCKPIQKVEWKHSRSGEGFVIFSGGLTY 427 (591)
Q Consensus 348 ~~v~~~~~sp~g~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~g~~~~ 427 (591)
..+.+++|+|+++++++++.||.|++||+. .++....+.+| ..+|.+++|+| ++.++++++.+.
T Consensus 962 ~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~-~~~~~~~~~~h-----------~~~v~~l~~s~----dg~~l~s~~~dg 1025 (1249)
T 3sfz_A 962 AQVSCCCLSPHLEYVAFGDEDGAIKIIELP-NNRVFSSGVGH-----------KKAVRHIQFTA----DGKTLISSSEDS 1025 (1249)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCCEEEETT-TTSCEEECCCC-----------SSCCCCEEECS----SSSCEEEECSSS
T ss_pred CcEEEEEEcCCCCEEEEEcCCCCEEEEEcC-CCceeeecccC-----------CCceEEEEECC----CCCEEEEEcCCC
Confidence 679999999999999999999999999999 78888889899 89999999987 455777777543
Q ss_pred CCCCCCCeEEEEecce---EEEEecCcceeEEEEcCCCCCcCCCCCceEEEEEecCC-eEEEecCCCCCCcccCCceeee
Q psy710 428 DKAGRSPSISVMHNKT---TTVLEMEHNVVDFVTLCESPYICEMQEPYAIVVLLHND-LVVIDLLTPGFPCFENPYPMDI 503 (591)
Q Consensus 428 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 503 (591)
.+.++.-.. .........+..+...++ ..+++.+.++ +.+||+.++ .....+..
T Consensus 1026 -------~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~----------~~l~~~~~dg~v~vwd~~~~-----~~~~~~~~ 1083 (1249)
T 3sfz_A 1026 -------VIQVWNWQTGDYVFLQAHQETVKDFRLLQD----------SRLLSWSFDGTVKVWNVITG-----RIERDFTC 1083 (1249)
T ss_dssp -------BEEEEETTTTEEECCBCCSSCEEEEEECSS----------SEEEEEESSSEEEEEETTTT-----CCCEEEEC
T ss_pred -------EEEEEECCCCceEEEecCCCcEEEEEEcCC----------CcEEEEECCCcEEEEECCCC-----ceeEEEcc
Confidence 445544222 111222345666555442 2355556666 999999874 23455667
Q ss_pred ecCCeeeeeecccCCCChhhhhhhccccccccccCCCCCccccC------------CCccCCCCCCcceEEEEEecCCcE
Q psy710 504 HESPVTCCVYLADCPSDLIPAFYSVGARGASKRTGFSEKEWPLS------------GGEWSPTSCSYYEVILTGHADGSV 571 (591)
Q Consensus 504 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~------------gg~~~~~~~~~~~~l~t~~~Dg~v 571 (591)
|...++++.+.+++.. ..+++ .+...+.|++. +.+.+.+|+|++++|+||+.||+|
T Consensus 1084 ~~~~v~~~~~s~d~~~------l~s~s------~d~~v~iwd~~~~~~~~~l~~h~~~v~~~~~s~dg~~lat~~~dg~i 1151 (1249)
T 3sfz_A 1084 HQGTVLSCAISSDATK------FSSTS------ADKTAKIWSFDLLSPLHELKGHNGCVRCSAFSLDGILLATGDDNGEI 1151 (1249)
T ss_dssp CSSCCCCEEECSSSSS------CEEEC------CSSCCCEECSSSSSCSBCCCCCSSCEEEEEECSSSSEEEEEETTSCC
T ss_pred cCCcEEEEEECCCCCE------EEEEc------CCCcEEEEECCCcceeeeeccCCCcEEEEEECCCCCEEEEEeCCCEE
Confidence 9999999999876321 11221 23334444432 234556889999999999999999
Q ss_pred EEEeCCCCcee
Q psy710 572 KFWDASAGNLQ 582 (591)
Q Consensus 572 r~Wd~~~~~l~ 582 (591)
++||+.++...
T Consensus 1152 ~vwd~~~~~~~ 1162 (1249)
T 3sfz_A 1152 RIWNVSDGQLL 1162 (1249)
T ss_dssp CEEESSSSCCC
T ss_pred EEEECCCCceE
Confidence 99999988654
No 6
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.7e-50 Score=436.55 Aligned_cols=518 Identities=15% Similarity=0.165 Sum_probs=347.7
Q ss_pred cccCCCCCCcEEEeCCCCcEEEEEeCCCcEEEEcCCCceeEeeccCCcceEEEEEeecCCEEEEecCCCeEEEEeecccC
Q psy710 2 FRHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGVDAHVRHETDAAVIQMQFLTNEGALITATADDSLHLWNFRQKR 81 (591)
Q Consensus 2 ~~~gh~~~v~~~~~spdg~~la~g~~dg~i~lw~~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~~~d~~i~vw~~~~~~ 81 (591)
.++||++.|++++|+|+|++||+|+.||.|+||+..+.+......|...|.+++|+| +++|++++.|++|++||+.+++
T Consensus 12 ~~~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~ 90 (902)
T 2oaj_A 12 NKYGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKLEDRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQK 90 (902)
T ss_dssp EEEECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEECSSCCCEEEEEEET-TTEEEEEETTCEEEEEETTTCS
T ss_pred cccCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEcCCCCCEEEEEEcC-CCEEEEEECcCeEEEEECCCCc
Confidence 468999999999999999999999999999999988666555556889999999999 8899999999999999999874
Q ss_pred ceeeeEEEeeccceEEEEeeCCceEEEEEeCCCcEEEEEeeeeeee-----------ceecccccccccC-CCCC-----
Q psy710 82 PEIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLS-----------GYIINWNKAIDVC-MKTH----- 144 (591)
Q Consensus 82 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~-----------~~~~~~~~~~~~~-~~~~----- 144 (591)
.+..+. |...|++++|+|++++|++|+.||.|++||+.++++. ..+.++...+... ++|+
T Consensus 91 --~~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l 167 (902)
T 2oaj_A 91 --VLTTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTV 167 (902)
T ss_dssp --EEEEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEE
T ss_pred --EEEEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEE
Confidence 566665 6688999999999999999999999999999887653 1122232222211 2221
Q ss_pred -----CCceeccCCCCcCcceeee-----------------ccCCCCceEEEECCCCCEEEEEeCCCcEEEeCCCCeEEE
Q psy710 145 -----PGPIIHLSDNPLDPSKTFR-----------------HGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGVDAH 202 (591)
Q Consensus 145 -----~~~~~~~~~~~~~~~~~~~-----------------~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~ 202 (591)
...+ .|.....+....+. ..|...|.+++|+|++++|++++.||.|++||..+++..
T Consensus 168 ~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~ 246 (902)
T 2oaj_A 168 LISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHMI 246 (902)
T ss_dssp EEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTCCEE
T ss_pred EEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEE
Confidence 2223 34333333333332 123577999999999999999999999999999877665
Q ss_pred Ee--------c-----------cCCCcEEEEEEEc----CC-ceEEEEeCC-----CcEEEEE-----------------
Q psy710 203 VR--------H-----------ETDAAVIQMQFLT----NE-GALITATAD-----DSLHLWN----------------- 236 (591)
Q Consensus 203 ~~--------~-----------~~~~~v~~~~~~~----~~-~~l~~~~~d-----~~i~~wd----------------- 236 (591)
.. + .+...|.+++|++ ++ ..|++++.+ ..+.+|+
T Consensus 247 ~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~ 326 (902)
T 2oaj_A 247 MARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDLGYTPRYSITSYEGMKN 326 (902)
T ss_dssp EEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEEECCCGGGCCHHHHHH
T ss_pred EEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEecCCCCCccccchhhhhh
Confidence 42 1 1234799999964 32 345555443 2455555
Q ss_pred ------------------------------------------------------ccCCCcceEEe-------eeeccccE
Q psy710 237 ------------------------------------------------------FRQKRPEIVHS-------LKFQRERI 255 (591)
Q Consensus 237 ------------------------------------------------------~~~~~~~~~~~-------~~~~~~~v 255 (591)
+.++. .... +..|...|
T Consensus 327 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~--~~~~~~~~~~~l~~~~~~v 404 (902)
T 2oaj_A 327 YYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGI--FTDKASLFPQNLSWLRPLA 404 (902)
T ss_dssp HHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCC--EECCGGGSCGGGTTBTTBE
T ss_pred hhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCC--cccccccCCCcccccCCCe
Confidence 22110 0000 01111233
Q ss_pred E----------------------------------EEEecCCCCEEEEEeCCccEEEEEccCccccce---eeehhhhcc
Q psy710 256 T----------------------------------YIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGY---IINWNKAID 298 (591)
Q Consensus 256 ~----------------------------------~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~---~~~~~~~~~ 298 (591)
+ .++|+|++++|++|+.|++|++||+.++..... .....+
T Consensus 405 ~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~--- 481 (902)
T 2oaj_A 405 TTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSR--- 481 (902)
T ss_dssp EEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHH---
T ss_pred eEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccCcEEEEecCCCcEEEEECCCccccCCceEEeechh---
Confidence 3 345578999999999999999999998754210 000000
Q ss_pred ccccCCCCCeEEEecCCCCCCeEEEEEcCCEEEEEecccce---------------------------------------
Q psy710 299 VCMKTHPGPIIHLSDNPLDPSKLLLAYETGLVVHWDLKLKR--------------------------------------- 339 (591)
Q Consensus 299 ~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~iwd~~~~~--------------------------------------- 339 (591)
....+|...|.+++|+| ++++||+|+.||+|+|||+.+++
T Consensus 482 ~~~~~h~~~V~svafsp-dg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 560 (902)
T 2oaj_A 482 TLNKAKELAVDKISFAA-ETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTG 560 (902)
T ss_dssp HTTCSSSCCEEEEEEET-TTTEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTT
T ss_pred hcCCCCCCceeEEEecC-CCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCC
Confidence 01137899999999999 99999999999999999998762
Q ss_pred ------EEEEec-cCCCeeEEEEeecCCEEEEEecCCcEEEEecCCCCCcee-----eec-ccccccCCCCCCCCCcceE
Q psy710 340 ------AEFRWQ-CSEPIKSVCWHYEGKQFLCSHTDGTISTWAVRPLAKPVS-----VNQ-PHIKTNKDGKLEQCKPIQK 406 (591)
Q Consensus 340 ------~~~~~~-~~~~v~~~~~sp~g~~l~s~~~dg~i~vwd~~~~~~~~~-----~~~-~~~~~~~~~~~~~~~~i~~ 406 (591)
++..+. |.+.|++++||||| +||+|+.|++|++||++ +...+. .+. +| ...|++
T Consensus 561 ~~~g~~~~~~l~~h~~~V~svafSpdG-~lAsgs~D~tv~lwd~~-~~~~~~~~~~~~~~~gh-----------~~~V~s 627 (902)
T 2oaj_A 561 VRQGFMPSTAVHANKGKTSAINNSNIG-FVGIAYAAGSLMLIDRR-GPAIIYMENIREISGAQ-----------SACVTC 627 (902)
T ss_dssp CSEEEEEEEEECCCSCSEEEEEECBTS-EEEEEETTSEEEEEETT-TTEEEEEEEGGGTCSSC-----------CCCEEE
T ss_pred CCCccceeEEEEcCCCcEEEEEecCCc-EEEEEeCCCcEEEEECC-CCeEEEEeehhHhcccc-----------ccceEE
Confidence 234444 89999999999999 99999999999999998 444432 232 66 789999
Q ss_pred EEEe-----ecCCC-CcEEEEECCccCCCCCCCCeEEEE---ecceEEEE----ec--CcceeEEEEcC-CCCC------
Q psy710 407 VEWK-----HSRSG-EGFVIFSGGLTYDKAGRSPSISVM---HNKTTTVL----EM--EHNVVDFVTLC-ESPY------ 464 (591)
Q Consensus 407 ~~~~-----~~~~~-~~~~l~~g~~~~~~~~~~~~~~~~---~~~~~~~~----~~--~~~~~~~~~~~-~~~~------ 464 (591)
|+|+ | ++ ++.+|++|+.|... ..+.+. .|+....+ .+ .++|+.+.++. +...
T Consensus 628 v~Fs~~~~~~--Dg~~~~~l~sgs~D~tv----~~wd~~p~~~g~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~~a~~ 701 (902)
T 2oaj_A 628 IEFVIMEYGD--DGYSSILMVCGTDMGEV----ITYKILPASGGKFDVQLMDITNVTSKGPIHKIDAFSKETKSSCLATI 701 (902)
T ss_dssp EEEEEEECTT--SSSEEEEEEEEETTSEE----EEEEEEECGGGCEEEEEEEEEECCSSCCCCEEEEEETTTCCBCBCBH
T ss_pred EEEEEEecCC--CCCcceEEEEEecCCcE----EEEEEecCCCCcEEEEecCceecCCCCceEEEEeEecCCCCcccCCH
Confidence 9999 5 21 35889999875411 222221 12222111 11 35666666443 1110
Q ss_pred ------cCCCCCceEEEEEecCCeEEEecCCCCCCcccCCceeeeecCCeeeeeecccCCCChhhhhhhccccccccccC
Q psy710 465 ------ICEMQEPYAIVVLLHNDLVVIDLLTPGFPCFENPYPMDIHESPVTCCVYLADCPSDLIPAFYSVGARGASKRTG 538 (591)
Q Consensus 465 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 538 (591)
..+...+..+++.+++++++|++.+... ....-.|...+..+.++.. -+
T Consensus 702 ~~~~~l~~~~~~~~~~l~~~~~~ir~~~~~~~k~-----~~k~~~~~~~~~~v~~~~~------------~~-------- 756 (902)
T 2oaj_A 702 PKMQNLSKGLCIPGIVLITGFDDIRLITLGKSKS-----THKGFKYPLAATGLSYIST------------VE-------- 756 (902)
T ss_dssp HHHHGGGGTCCCCEEEEEECSSEEEEECTTCCCE-----EEEECSSCEEEEEEEEEEE------------EC--------
T ss_pred HHHhccCCCCCCCeEEEEEeccceEEEeCccccc-----eeeEcccceeeeEEEEEEe------------cc--------
Confidence 0111223445555555599999977310 0111011101111100000 00
Q ss_pred CCCCccccCCCccCCCCCCcceEEEEEecCCcEEEEeCCCCceeEEEEe
Q psy710 539 FSEKEWPLSGGEWSPTSCSYYEVILTGHADGSVKFWDASAGNLQVLYKL 587 (591)
Q Consensus 539 ~~~~~w~~~gg~~~~~~~~~~~~l~t~~~Dg~vr~Wd~~~~~l~~~~~~ 587 (591)
...+++++..|++++.||+||+|++.+++.....++
T Consensus 757 -------------~~~~~~~~~~l~~~~~~g~i~~~s~p~l~~~~~~~~ 792 (902)
T 2oaj_A 757 -------------KNNDRKNLTVIITLEINGHLRVFTIPDFKEQMSEHI 792 (902)
T ss_dssp -------------SSSCEEEEEEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred -------------ccccccCceEEEEEeCCCcEEEEECcchHHHhhccC
Confidence 112468889999999999999999999876555554
No 7
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=4.4e-49 Score=446.85 Aligned_cols=513 Identities=13% Similarity=0.117 Sum_probs=392.8
Q ss_pred cCCCCCCcEEEeCCCCcEEEEEeCCCcEEEEcCC-CceeEeeccCCcceEEEEEeec--CCEEEEecCCCeEEEEeeccc
Q psy710 4 HGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRP-GVDAHVRHETDAAVIQMQFLTN--EGALITATADDSLHLWNFRQK 80 (591)
Q Consensus 4 ~gh~~~v~~~~~spdg~~la~g~~dg~i~lw~~~-~~~~~~~~~h~~~v~~l~~sp~--~~~l~s~~~d~~i~vw~~~~~ 80 (591)
.+|.+.|++++|+|+|++||+|+.||.|++||+. +..+..+.+|...|.+++|+|+ +.++++++.|+.|++||+.++
T Consensus 654 ~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~ 733 (1249)
T 3sfz_A 654 KAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQK 733 (1249)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSS
T ss_pred ccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCc
Confidence 4799999999999999999999999999999987 7778889999999999999994 568999999999999999988
Q ss_pred CceeeeEEEeeccceEEEEeeCCceEEEEEeCCCcEEEEEeeeeeeeceeccccc-------------cc-ccCCCCCCC
Q psy710 81 RPEIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNK-------------AI-DVCMKTHPG 146 (591)
Q Consensus 81 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~-------------~~-~~~~~~~~~ 146 (591)
+ ....+.+|...|.+++|+|+++.+++++.||.|++||+.+++....+..... .+ ...+++++.
T Consensus 734 ~--~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~ 811 (1249)
T 3sfz_A 734 E--CRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGD 811 (1249)
T ss_dssp S--EEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSS
T ss_pred c--hhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCC
Confidence 4 7888899999999999999999999999999999999998876655432211 01 111344444
Q ss_pred ce--------eccCCCCcCcceeeeccCCCCceEEEECCCCCEEEEEeCCCcEEEeCCCCeEEEE-eccCCCcEEEEEEE
Q psy710 147 PI--------IHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGVDAHV-RHETDAAVIQMQFL 217 (591)
Q Consensus 147 ~~--------~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~-~~~~~~~v~~~~~~ 217 (591)
.+ ..+..........+..+|...+.+++|+|+++++++++.+|.|++|+..+..... ...+...|.+++|+
T Consensus 812 ~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~s 891 (1249)
T 3sfz_A 812 KIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFS 891 (1249)
T ss_dssp EEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEEC
T ss_pred EEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecCCCccceEEEEEC
Confidence 33 2233344445555556889999999999999999999999999999998876654 44567799999999
Q ss_pred cCCceEEEEeCCCcEEEEEccCCCc---------------------------ceEEee--------eeccccEEEEEecC
Q psy710 218 TNEGALITATADDSLHLWNFRQKRP---------------------------EIVHSL--------KFQRERITYIHLPL 262 (591)
Q Consensus 218 ~~~~~l~~~~~d~~i~~wd~~~~~~---------------------------~~~~~~--------~~~~~~v~~~~~sp 262 (591)
|++++|++++.|+.|++||+..... ..+... ..+...+.+++++|
T Consensus 892 pdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp 971 (1249)
T 3sfz_A 892 PDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSP 971 (1249)
T ss_dssp TTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECT
T ss_pred CCCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcC
Confidence 9999999999999999999753100 000000 11245689999999
Q ss_pred CCCEEEEEeCCccEEEEEccCccccceeeehhhhccccccCCCCCeEEEecCCCCCCeEEEEEcCCEEEEEecccceEEE
Q psy710 263 QSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKLLLAYETGLVVHWDLKLKRAEF 342 (591)
Q Consensus 263 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~iwd~~~~~~~~ 342 (591)
+++++++|+.+|.|++||+.+++. ...+.+|...|.+++|+| ++++|++++.|+.|++||+.+++...
T Consensus 972 ~g~~l~~g~~~g~i~i~d~~~~~~-----------~~~~~~h~~~v~~l~~s~-dg~~l~s~~~dg~i~vwd~~~~~~~~ 1039 (1249)
T 3sfz_A 972 HLEYVAFGDEDGAIKIIELPNNRV-----------FSSGVGHKKAVRHIQFTA-DGKTLISSSEDSVIQVWNWQTGDYVF 1039 (1249)
T ss_dssp TSSEEEEEETTSCCEEEETTTTSC-----------EEECCCCSSCCCCEEECS-SSSCEEEECSSSBEEEEETTTTEEEC
T ss_pred CCCEEEEEcCCCCEEEEEcCCCce-----------eeecccCCCceEEEEECC-CCCEEEEEcCCCEEEEEECCCCceEE
Confidence 999999999999999999998766 336778999999999999 99999999999999999999999888
Q ss_pred EeccCCCeeEEEEeecCCEEEEEecCCcEEEEecCCCCCceeeecccccccCCCCCCCCCcceEEEEeecCCCCcEEEEE
Q psy710 343 RWQCSEPIKSVCWHYEGKQFLCSHTDGTISTWAVRPLAKPVSVNQPHIKTNKDGKLEQCKPIQKVEWKHSRSGEGFVIFS 422 (591)
Q Consensus 343 ~~~~~~~v~~~~~sp~g~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~ 422 (591)
...|...|.+++|+|++ .+++++.||.|++||+. ++++...+..| ..+|.+++|+| ++.++++
T Consensus 1040 ~~~~~~~v~~~~~~~~~-~l~~~~~dg~v~vwd~~-~~~~~~~~~~~-----------~~~v~~~~~s~----d~~~l~s 1102 (1249)
T 3sfz_A 1040 LQAHQETVKDFRLLQDS-RLLSWSFDGTVKVWNVI-TGRIERDFTCH-----------QGTVLSCAISS----DATKFSS 1102 (1249)
T ss_dssp CBCCSSCEEEEEECSSS-EEEEEESSSEEEEEETT-TTCCCEEEECC-----------SSCCCCEEECS----SSSSCEE
T ss_pred EecCCCcEEEEEEcCCC-cEEEEECCCcEEEEECC-CCceeEEEccc-----------CCcEEEEEECC----CCCEEEE
Confidence 78899999999999976 57888999999999999 78889999999 88999999987 4456777
Q ss_pred CCccCCCCCCCCeEEEEe---cceEEEEe-cCcceeEEEEcCCCCCcCCCCCceEEEEEecCC-eEEEecCCCCCCc-c-
Q psy710 423 GGLTYDKAGRSPSISVMH---NKTTTVLE-MEHNVVDFVTLCESPYICEMQEPYAIVVLLHND-LVVIDLLTPGFPC-F- 495 (591)
Q Consensus 423 g~~~~~~~~~~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~- 495 (591)
|+.+. .+.++. +.....+. ....+..+...|+ ...+++.+.++ +++|++.+..... +
T Consensus 1103 ~s~d~-------~v~iwd~~~~~~~~~l~~h~~~v~~~~~s~d---------g~~lat~~~dg~i~vwd~~~~~~~~~~~ 1166 (1249)
T 3sfz_A 1103 TSADK-------TAKIWSFDLLSPLHELKGHNGCVRCSAFSLD---------GILLATGDDNGEIRIWNVSDGQLLHSCA 1166 (1249)
T ss_dssp ECCSS-------CCCEECSSSSSCSBCCCCCSSCEEEEEECSS---------SSEEEEEETTSCCCEEESSSSCCCCCCC
T ss_pred EcCCC-------cEEEEECCCcceeeeeccCCCcEEEEEECCC---------CCEEEEEeCCCEEEEEECCCCceEEEec
Confidence 77543 122221 21111111 1234555555443 33455555666 9999998743211 0
Q ss_pred --cCCceeeeecCCeeeeeecccCCCChhhhhhhccccccccccCCCCCcccc------------CCCccCCCCCCcceE
Q psy710 496 --ENPYPMDIHESPVTCCVYLADCPSDLIPAFYSVGARGASKRTGFSEKEWPL------------SGGEWSPTSCSYYEV 561 (591)
Q Consensus 496 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~------------~gg~~~~~~~~~~~~ 561 (591)
........|...++.+.|.+++..-. +++ ...+.|++ .+.+...+|+||+++
T Consensus 1167 ~~~~~~~~~~~~~~v~~l~fs~dg~~l~------s~~--------g~v~vwd~~~g~~~~~~~~~~~~i~~~~~s~dg~~ 1232 (1249)
T 3sfz_A 1167 PISVEEGTATHGGWVTDVCFSPDSKTLV------SAG--------GYLKWWNVATGDSSQTFYTNGTNLKKIHVSPDFRT 1232 (1249)
T ss_dssp CCC-------CCSCCCEEEECTTSSCEE------EES--------SSEEEBCSSSCBCCCCCCCSSCCCCCCEECSSSCC
T ss_pred cccccccccccCceEEEEEECCCCCEEE------ECC--------CeEEEEECCCCceeeeeeccCCcccEEEECCCCCE
Confidence 01111246889999999988742111 110 12233332 223455688999999
Q ss_pred EEEEecCCcEEEEeCC
Q psy710 562 ILTGHADGSVKFWDAS 577 (591)
Q Consensus 562 l~t~~~Dg~vr~Wd~~ 577 (591)
|++++.||.|++|++.
T Consensus 1233 l~~~~~dg~v~vw~l~ 1248 (1249)
T 3sfz_A 1233 YVTVDNLGILYILQVL 1248 (1249)
T ss_dssp EEEECTTCCEEEECCC
T ss_pred EEEecCCcEEEEEeec
Confidence 9999999999999975
No 8
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=3.5e-48 Score=407.33 Aligned_cols=491 Identities=11% Similarity=0.122 Sum_probs=368.1
Q ss_pred cCCCCCCcEEEeCCCCcEEEEEeCCCcEEEEcCC-C----ceeEeeccCCcc-eEEEEEee--cCCEEEEecCCCeEEEE
Q psy710 4 HGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRP-G----VDAHVRHETDAA-VIQMQFLT--NEGALITATADDSLHLW 75 (591)
Q Consensus 4 ~gh~~~v~~~~~spdg~~la~g~~dg~i~lw~~~-~----~~~~~~~~h~~~-v~~l~~sp--~~~~l~s~~~d~~i~vw 75 (591)
..|.+.|++++|+|||++||+++ ++.|++|+++ + .....+.+|... |.+++|+| ++++|++++.|+.|++|
T Consensus 15 ~~~~~~v~~~~~spdg~~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw 93 (615)
T 1pgu_A 15 STQRNFTTHLSYDPTTNAIAYPC-GKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVW 93 (615)
T ss_dssp CCCTTCCCCCEEETTTTEEEEEE-TTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEE
T ss_pred CCccCceeEEEECCCCCEEEEec-CCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEE
Confidence 46899999999999999999998 7899999988 5 578889999999 99999999 99999999999999999
Q ss_pred eeccc------CceeeeEEEeeccceEEEEeeCCceEEEEEeCC----CcEEEEEeeeeeeeceecccccccccC-CCCC
Q psy710 76 NFRQK------RPEIVHSLKFQRERITYIHLPLQSKWLYVGTEK----GNIHVVNIESFTLSGYIINWNKAIDVC-MKTH 144 (591)
Q Consensus 76 ~~~~~------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----~~i~vwd~~~~~~~~~~~~~~~~~~~~-~~~~ 144 (591)
|+.++ +......+..|...|.+++|+|++++|++++.+ +.|++|| .++....+..+...+... +.++
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d--~~~~~~~~~~~~~~v~~~~~~~~ 171 (615)
T 1pgu_A 94 GWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD--SGNSLGEVSGHSQRINACHLKQS 171 (615)
T ss_dssp EEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETT--TCCEEEECCSCSSCEEEEEECSS
T ss_pred eCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEE--CCCcceeeecCCccEEEEEECCC
Confidence 99765 445777888899999999999999999999987 6888888 455556666555544332 3444
Q ss_pred CC----------ceeccCCCCcCcceeeeccCCC---CceEEEECCC-CCEEEEEeCCCcEEEeCCCCeEEEEec-----
Q psy710 145 PG----------PIIHLSDNPLDPSKTFRHGFPY---QPTAIAFDPI-QKLLAIGTKTGSLRLLGRPGVDAHVRH----- 205 (591)
Q Consensus 145 ~~----------~~~~~~~~~~~~~~~~~~~~~~---~v~~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~----- 205 (591)
+. .+..+.....+....+ .+|.. .|.+++|+|+ ++++++++.||.|++||+.+.+.....
T Consensus 172 ~~~~l~~~~~d~~v~vwd~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~ 250 (615)
T 1pgu_A 172 RPMRSMTVGDDGSVVFYQGPPFKFSASD-RTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQE 250 (615)
T ss_dssp SSCEEEEEETTTEEEEEETTTBEEEEEE-CSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTB
T ss_pred CCcEEEEEeCCCcEEEEeCCCcceeeee-cccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEeccccc
Confidence 43 2333444444444444 35777 8999999999 999999999999999999888777655
Q ss_pred cCCCcEEEEEEEcCCceEEEEeCCCcEEEEEccCCCcceEEeeeec----cccEEEEEecCCCCEEEEEeCCccEEEEEc
Q psy710 206 ETDAAVIQMQFLTNEGALITATADDSLHLWNFRQKRPEIVHSLKFQ----RERITYIHLPLQSKWLYVGTEKGNIHVVNI 281 (591)
Q Consensus 206 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~----~~~v~~~~~sp~~~~l~~~~~dg~i~i~d~ 281 (591)
.+...|.+++|+ ++++|++++.|+.|++||++++ +.+..+..+ ...+.++.++ +++++++++.|+.|++||+
T Consensus 251 ~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~--~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~g~i~~~d~ 326 (615)
T 1pgu_A 251 PVQGGIFALSWL-DSQKFATVGADATIRVWDVTTS--KCVQKWTLDKQQLGNQQVGVVAT-GNGRIISLSLDGTLNFYEL 326 (615)
T ss_dssp CCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTT--EEEEEEECCTTCGGGCEEEEEEE-ETTEEEEEETTSCEEEEET
T ss_pred ccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCC--cEEEEEcCCCCcccCceeEEEeC-CCCeEEEEECCCCEEEEEC
Confidence 678899999999 9999999999999999999987 677777765 4678888885 8999999999999999999
Q ss_pred cCcccccee------------------------eehhhhccccccCCCCCeEEEecCCCCCCeEEEEEcCCEEEEEeccc
Q psy710 282 ESFTLSGYI------------------------INWNKAIDVCMKTHPGPIIHLSDNPLDPSKLLLAYETGLVVHWDLKL 337 (591)
Q Consensus 282 ~~~~~~~~~------------------------~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~iwd~~~ 337 (591)
.+++..... ..|+.. ... ..|...|.+++| + +++.|++++.|+.|++||+.+
T Consensus 327 ~~~~~~~~~~~~~~~v~~~~~~~l~~~~~dg~i~~w~~~-~~~-~~~~~~v~~~~~-~-~~~~l~~~~~d~~i~~~~~~~ 402 (615)
T 1pgu_A 327 GHDEVLKTISGHNKGITALTVNPLISGSYDGRIMEWSSS-SMH-QDHSNLIVSLDN-S-KAQEYSSISWDDTLKVNGITK 402 (615)
T ss_dssp TEEEEEEEECCCSSCEEEEETTTTEEEETTSCEEETTTT-EEE-CCCCSCEEEEEC-C-STTCCEEEETTTEEEETTEEE
T ss_pred CCCcEEEEEeCCCCCEEEEEecCcEEECCCCeEEEEEch-hhc-CcccCceEEEEE-C-CCcEEEEEeCCCCEEEEEccc
Confidence 875542111 011111 001 457777788888 4 578889999999999888763
Q ss_pred ----------------------------------ceEEEEeccCCCeeEEEEeecCCEEEEEec-CCcEEEEecCCCCCc
Q psy710 338 ----------------------------------KRAEFRWQCSEPIKSVCWHYEGKQFLCSHT-DGTISTWAVRPLAKP 382 (591)
Q Consensus 338 ----------------------------------~~~~~~~~~~~~v~~~~~sp~g~~l~s~~~-dg~i~vwd~~~~~~~ 382 (591)
++....+.+...+.+++|+ +++|++++. |+.|++||+. .++.
T Consensus 403 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~d~~i~~~~~~-~~~~ 479 (615)
T 1pgu_A 403 HEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLS--QNYVAVGLEEGNTIQVFKLS-DLEV 479 (615)
T ss_dssp EECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEEC--SSEEEEEETTTSCEEEEETT-EEEE
T ss_pred CcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCceeeecccCCCceEEEEc--CCEEEEeecCCCeEEEEECC-Cccc
Confidence 4455556678899999998 889999999 9999999999 4444
Q ss_pred e-eeecccccccCCCCCCCCCcceEEEEeecCCCCcEEEEECCccCCCCCCCCeEEEEec---ceEEEEe--cCcceeEE
Q psy710 383 V-SVNQPHIKTNKDGKLEQCKPIQKVEWKHSRSGEGFVIFSGGLTYDKAGRSPSISVMHN---KTTTVLE--MEHNVVDF 456 (591)
Q Consensus 383 ~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~---~~~~~~~--~~~~~~~~ 456 (591)
. ..+..| ..+|.+++|+| ++.+|++|+.+. .+.++.- +....+. ....+..+
T Consensus 480 ~~~~~~~~-----------~~~v~~~~~s~----~g~~l~~~~~dg-------~i~iw~~~~~~~~~~~~~~h~~~v~~~ 537 (615)
T 1pgu_A 480 SFDLKTPL-----------RAKPSYISISP----SETYIAAGDVMG-------KILLYDLQSREVKTSRWAFRTSKINAI 537 (615)
T ss_dssp EEECSSCC-----------SSCEEEEEECT----TSSEEEEEETTS-------CEEEEETTTTEEEECCSCCCSSCEEEE
T ss_pred cccccCCc-----------cCceEEEEECC----CCCEEEEcCCCC-------eEEEeeCCCCcceeEeecCCCCceeEE
Confidence 3 566677 78999999987 556788887543 4455443 2222222 34567777
Q ss_pred EEcCCCC-CcCCCCCceEEEEEecCC-eEEEecCCCCCCcccCCceeeeecCCeeeeeecccCCCChhhhhhhccccccc
Q psy710 457 VTLCESP-YICEMQEPYAIVVLLHND-LVVIDLLTPGFPCFENPYPMDIHESPVTCCVYLADCPSDLIPAFYSVGARGAS 534 (591)
Q Consensus 457 ~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 (591)
...|... ......+...+++...++ +++|++.+..-+ ...+..|...|+++.|
T Consensus 538 ~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~----~~~~~~h~~~v~~l~~--------------------- 592 (615)
T 1pgu_A 538 SWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKI----IKALNAHKDGVNNLLW--------------------- 592 (615)
T ss_dssp EECCCC------CCSCCEEEEEETTSCEEEEESSCTTCC----EEETTSSTTCEEEEEE---------------------
T ss_pred EEcCccccccccccCCCEEEEEcCCCcEEEEECCCCcee----chhhhcCccceEEEEE---------------------
Confidence 6665110 000111234555556666 999999773211 1223345555555555
Q ss_pred cccCCCCCccccCCCccCCCCCCcceEEEEEecCCcEEEEeCCC
Q psy710 535 KRTGFSEKEWPLSGGEWSPTSCSYYEVILTGHADGSVKFWDASA 578 (591)
Q Consensus 535 ~~~~~~~~~w~~~gg~~~~~~~~~~~~l~t~~~Dg~vr~Wd~~~ 578 (591)
+|+++ |+|++.||+|++||+..
T Consensus 593 ---------------------s~~~~-l~s~~~d~~v~iw~~~~ 614 (615)
T 1pgu_A 593 ---------------------ETPST-LVSSGADACIKRWNVVL 614 (615)
T ss_dssp ---------------------EETTE-EEEEETTSCEEEEEEC-
T ss_pred ---------------------cCCCC-eEEecCCceEEEEeeec
Confidence 56678 99999999999999875
No 9
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=3.1e-46 Score=357.06 Aligned_cols=291 Identities=15% Similarity=0.276 Sum_probs=259.3
Q ss_pred eeEeeccCCcceEEEEEeec----CCEEEEecCCCeEEEEeecccCceeeeEEEeeccceEEEEeeCCceEEEEEeCCCc
Q psy710 40 DAHVRHETDAAVIQMQFLTN----EGALITATADDSLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEKGN 115 (591)
Q Consensus 40 ~~~~~~~h~~~v~~l~~sp~----~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~ 115 (591)
..+.+.+|.+.|++++|+|+ +++|++|+.|++|++|++..++......+.+|...|.+++|++++..+++++.|+.
T Consensus 24 ~~~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~ 103 (321)
T 3ow8_A 24 LFKQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAH 103 (321)
T ss_dssp EEEETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSE
T ss_pred eeeecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCc
Confidence 34566789999999999985 56899999999999999987754456678999999999999999999999999999
Q ss_pred EEEEEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCCCCEEEEEeCCCcEEEeC
Q psy710 116 IHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLG 195 (591)
Q Consensus 116 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d 195 (591)
|++||+.+++....+. .+...+.+++|+|++++|++++.+|.|++|+
T Consensus 104 i~lWd~~~~~~~~~~~---------------------------------~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~ 150 (321)
T 3ow8_A 104 IRLWDLENGKQIKSID---------------------------------AGPVDAWTLAFSPDSQYLATGTHVGKVNIFG 150 (321)
T ss_dssp EEEEETTTTEEEEEEE---------------------------------CCTTCCCCEEECTTSSEEEEECTTSEEEEEE
T ss_pred EEEEECCCCCEEEEEe---------------------------------CCCccEEEEEECCCCCEEEEEcCCCcEEEEE
Confidence 9999999887666554 3455678999999999999999999999999
Q ss_pred CCCeEEEE-eccCCCcEEEEEEEcCCceEEEEeCCCcEEEEEccCCCcceEEeeeeccccEEEEEecCCCCEEEEEeCCc
Q psy710 196 RPGVDAHV-RHETDAAVIQMQFLTNEGALITATADDSLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEKG 274 (591)
Q Consensus 196 ~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg 274 (591)
+...+... ...+...+.+++|+|++++|++++.|+.|++||++++ +.+..+.+|..+|.+++|+|++++|++++.|+
T Consensus 151 ~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~--~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg 228 (321)
T 3ow8_A 151 VESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATG--KLLHTLEGHAMPIRSLTFSPDSQLLVTASDDG 228 (321)
T ss_dssp TTTCSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT--EEEEEECCCSSCCCEEEECTTSCEEEEECTTS
T ss_pred cCCCceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCC--cEEEEEcccCCceeEEEEcCCCCEEEEEcCCC
Confidence 98766543 3344668999999999999999999999999999988 78889999999999999999999999999999
Q ss_pred cEEEEEccCccccceeeehhhhccccccCCCCCeEEEecCCCCCCeEEEEEcCCEEEEEecccceEEEEec-cCCCeeEE
Q psy710 275 NIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKLLLAYETGLVVHWDLKLKRAEFRWQ-CSEPIKSV 353 (591)
Q Consensus 275 ~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~ 353 (591)
.|++||+++.+. ...+.+|...|.+++|+| ++.+|++++.|+.|++||+.+++++..+. |...|.++
T Consensus 229 ~i~iwd~~~~~~-----------~~~~~~h~~~v~~~~~sp-~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v 296 (321)
T 3ow8_A 229 YIKIYDVQHANL-----------AGTLSGHASWVLNVAFCP-DDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGV 296 (321)
T ss_dssp CEEEEETTTCCE-----------EEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEE
T ss_pred eEEEEECCCcce-----------eEEEcCCCCceEEEEECC-CCCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEE
Confidence 999999998766 336788999999999999 99999999999999999999999887765 89999999
Q ss_pred EEeecCCEEEEEecCCcEEEEecC
Q psy710 354 CWHYEGKQFLCSHTDGTISTWAVR 377 (591)
Q Consensus 354 ~~sp~g~~l~s~~~dg~i~vwd~~ 377 (591)
+|+|++++|++++.||.|++||..
T Consensus 297 ~~s~~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 297 KYNGNGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp EECTTSSEEEEEETTCCEEEEECC
T ss_pred EECCCCCEEEEEeCCCeEEEEeCC
Confidence 999999999999999999999974
No 10
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=8.6e-46 Score=367.07 Aligned_cols=285 Identities=11% Similarity=0.183 Sum_probs=259.3
Q ss_pred ccCCCCCCcEEEeCCCCcEEEEEeCCCcEEEEcCC-CceeEeeccCCcceEEEEEeecCCEEEEecCCCeEEEEeecccC
Q psy710 3 RHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRP-GVDAHVRHETDAAVIQMQFLTNEGALITATADDSLHLWNFRQKR 81 (591)
Q Consensus 3 ~~gh~~~v~~~~~spdg~~la~g~~dg~i~lw~~~-~~~~~~~~~h~~~v~~l~~sp~~~~l~s~~~d~~i~vw~~~~~~ 81 (591)
..||.+.|++++|+|++++||+|+.||+|++||+. +.....+.+|...|.+++|+|++++|++++.|++|++||+.++
T Consensus 104 l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~- 182 (410)
T 1vyh_C 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF- 182 (410)
T ss_dssp EECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSS-
T ss_pred ecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCC-
Confidence 45899999999999999999999999999999987 6677889999999999999999999999999999999999887
Q ss_pred ceeeeEEEeeccceEEEEeeCCceEEEEEeCCCcEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCccee
Q psy710 82 PEIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKT 161 (591)
Q Consensus 82 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (591)
+.+..+.+|...|.+++|+|++++|++++.|+.|++||+.++++...+.
T Consensus 183 -~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~------------------------------ 231 (410)
T 1vyh_C 183 -ECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFT------------------------------ 231 (410)
T ss_dssp -CEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEE------------------------------
T ss_pred -ceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEe------------------------------
Confidence 4788899999999999999999999999999999999999877665554
Q ss_pred eeccCCCCceEEEECCCCCEEEEEeCCCcEEEeCCCCeEEEE-eccCCCcEEEEEEEcC--------------------C
Q psy710 162 FRHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGVDAHV-RHETDAAVIQMQFLTN--------------------E 220 (591)
Q Consensus 162 ~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~-~~~~~~~v~~~~~~~~--------------------~ 220 (591)
+|...|.+++++|+++++++|+.|+.|++||+.+.+... ...+...|.+++|+|+ +
T Consensus 232 ---~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 308 (410)
T 1vyh_C 232 ---GHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPG 308 (410)
T ss_dssp ---CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------C
T ss_pred ---CCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCC
Confidence 567778999999999999999999999999998776653 3456779999999996 6
Q ss_pred ceEEEEeCCCcEEEEEccCCCcceEEeeeeccccEEEEEecCCCCEEEEEeCCccEEEEEccCccccceeeehhhhcccc
Q psy710 221 GALITATADDSLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVC 300 (591)
Q Consensus 221 ~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~ 300 (591)
.+|++++.|+.|++||++++ .++..+.+|...|.+++|+|++++|++|+.|+.|++||+.+++. ...
T Consensus 309 ~~l~sgs~D~~i~iwd~~~~--~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~-----------~~~ 375 (410)
T 1vyh_C 309 PFLLSGSRDKTIKMWDVSTG--MCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRC-----------MKT 375 (410)
T ss_dssp CEEEEEETTSEEEEEETTTT--EEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCC-----------CEE
T ss_pred CEEEEEeCCCeEEEEECCCC--ceEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCce-----------EEE
Confidence 68999999999999999988 78899999999999999999999999999999999999988766 336
Q ss_pred ccCCCCCeEEEecCCCCCCeEEEEEcCCEEEEEecc
Q psy710 301 MKTHPGPIIHLSDNPLDPSKLLLAYETGLVVHWDLK 336 (591)
Q Consensus 301 ~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~iwd~~ 336 (591)
+.+|...|++++|+| ++.+|++|+.|+.|++|+++
T Consensus 376 ~~~h~~~v~~l~~~~-~~~~l~sgs~D~~i~vW~~r 410 (410)
T 1vyh_C 376 LNAHEHFVTSLDFHK-TAPYVVTGSVDQTVKVWECR 410 (410)
T ss_dssp EECCSSCEEEEEECS-SSSCEEEEETTSEEEEEC--
T ss_pred EcCCCCcEEEEEEcC-CCCEEEEEeCCCcEEEEeCC
Confidence 778999999999999 99999999999999999863
No 11
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=1.1e-45 Score=366.34 Aligned_cols=290 Identities=13% Similarity=0.197 Sum_probs=261.5
Q ss_pred ceeEeeccCCcceEEEEEeecCCEEEEecCCCeEEEEeecccCceeeeEEEeeccceEEEEeeCCceEEEEEeCCCcEEE
Q psy710 39 VDAHVRHETDAAVIQMQFLTNEGALITATADDSLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHV 118 (591)
Q Consensus 39 ~~~~~~~~h~~~v~~l~~sp~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v 118 (591)
.....+.+|..+|++++|+|++++|++++.|++|++||+.+++ ....+.+|...|.+++|+|++++|++|+.|++|++
T Consensus 99 ~~~~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~--~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~i 176 (410)
T 1vyh_C 99 PEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGD--FERTLKGHTDSVQDISFDHSGKLLASCSADMTIKL 176 (410)
T ss_dssp SCSCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCC--CCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCE
T ss_pred CceEeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc--EEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEE
Confidence 3455678999999999999999999999999999999999884 67889999999999999999999999999999999
Q ss_pred EEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCCCCEEEEEeCCCcEEEeCCCC
Q psy710 119 VNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPG 198 (591)
Q Consensus 119 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~ 198 (591)
||+.++++...+. +|...|.+++|+|++++|++|+.|+.|++||+.+
T Consensus 177 wd~~~~~~~~~~~---------------------------------~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~ 223 (410)
T 1vyh_C 177 WDFQGFECIRTMH---------------------------------GHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQT 223 (410)
T ss_dssp EETTSSCEEECCC---------------------------------CCSSCEEEEEECSSSSEEEEEETTSEEEEEETTT
T ss_pred EeCCCCceeEEEc---------------------------------CCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCC
Confidence 9998876655443 5777899999999999999999999999999988
Q ss_pred eEEEE-eccCCCcEEEEEEEcCCceEEEEeCCCcEEEEEccCCCcceEEeeeeccccEEEEEecCC--------------
Q psy710 199 VDAHV-RHETDAAVIQMQFLTNEGALITATADDSLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQ-------------- 263 (591)
Q Consensus 199 ~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~sp~-------------- 263 (591)
..+.. ...+...|.++.|+|++++|++++.|+.|++||+++. .....+..|...|.+++|+|+
T Consensus 224 ~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~--~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~ 301 (410)
T 1vyh_C 224 GYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATK--ECKAELREHRHVVECISWAPESSYSSISEATGSET 301 (410)
T ss_dssp CCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTC--CEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-
T ss_pred CcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCC--ceeeEecCCCceEEEEEEcCcccccchhhhccccc
Confidence 76653 3455679999999999999999999999999999988 788889999999999999996
Q ss_pred ------CCEEEEEeCCccEEEEEccCccccceeeehhhhccccccCCCCCeEEEecCCCCCCeEEEEEcCCEEEEEeccc
Q psy710 264 ------SKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKLLLAYETGLVVHWDLKL 337 (591)
Q Consensus 264 ------~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~iwd~~~ 337 (591)
+.++++|+.|+.|++||+.+++. ...+.+|...|.+++|+| ++++|++++.|+.|++||+.+
T Consensus 302 ~~~~~~g~~l~sgs~D~~i~iwd~~~~~~-----------~~~~~~h~~~v~~v~~~~-~g~~l~s~s~D~~i~vwd~~~ 369 (410)
T 1vyh_C 302 KKSGKPGPFLLSGSRDKTIKMWDVSTGMC-----------LMTLVGHDNWVRGVLFHS-GGKFILSCADDKTLRVWDYKN 369 (410)
T ss_dssp ------CCEEEEEETTSEEEEEETTTTEE-----------EEEEECCSSCEEEEEECS-SSSCEEEEETTTEEEEECCTT
T ss_pred cccCCCCCEEEEEeCCCeEEEEECCCCce-----------EEEEECCCCcEEEEEEcC-CCCEEEEEeCCCeEEEEECCC
Confidence 67899999999999999998776 336778999999999999 999999999999999999999
Q ss_pred ceEEEEec-cCCCeeEEEEeecCCEEEEEecCCcEEEEecC
Q psy710 338 KRAEFRWQ-CSEPIKSVCWHYEGKQFLCSHTDGTISTWAVR 377 (591)
Q Consensus 338 ~~~~~~~~-~~~~v~~~~~sp~g~~l~s~~~dg~i~vwd~~ 377 (591)
++....+. |...|++++|+|++.+|++++.||+|++|+++
T Consensus 370 ~~~~~~~~~h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~~r 410 (410)
T 1vyh_C 370 KRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410 (410)
T ss_dssp SCCCEEEECCSSCEEEEEECSSSSCEEEEETTSEEEEEC--
T ss_pred CceEEEEcCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCC
Confidence 88776665 89999999999999999999999999999964
No 12
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=6.7e-45 Score=347.83 Aligned_cols=285 Identities=12% Similarity=0.162 Sum_probs=253.8
Q ss_pred ccCCCCCCcEEEeCCC----CcEEEEEeCCCcEEEEcCCCce---eEeeccCCcceEEEEEeecCCEEEEecCCCeEEEE
Q psy710 3 RHGFPYQPTAIAFDPI----QKLLAIGTKTGSLRLLGRPGVD---AHVRHETDAAVIQMQFLTNEGALITATADDSLHLW 75 (591)
Q Consensus 3 ~~gh~~~v~~~~~spd----g~~la~g~~dg~i~lw~~~~~~---~~~~~~h~~~v~~l~~sp~~~~l~s~~~d~~i~vw 75 (591)
..+|.+.|++++|+|+ +++||+|+.|++|+||++.... ...+.+|...|.+++|+|++.++++++.|++|++|
T Consensus 28 ~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lW 107 (321)
T 3ow8_A 28 EQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLW 107 (321)
T ss_dssp TTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEEEEE
T ss_pred cccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEE
Confidence 3589999999999985 6799999999999999986432 34688999999999999999999999999999999
Q ss_pred eecccCceeeeEEEeeccceEEEEeeCCceEEEEEeCCCcEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCCC
Q psy710 76 NFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNP 155 (591)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (591)
|+.++ +.+..+..|...+.+++|+|++++|++++.|+.|++|++++++....+.
T Consensus 108 d~~~~--~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~------------------------ 161 (321)
T 3ow8_A 108 DLENG--KQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLD------------------------ 161 (321)
T ss_dssp ETTTT--EEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEE------------------------
T ss_pred ECCCC--CEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEec------------------------
Confidence 99987 4678888898999999999999999999999999999998866544433
Q ss_pred cCcceeeeccCCCCceEEEECCCCCEEEEEeCCCcEEEeCCCCeEEEEe-ccCCCcEEEEEEEcCCceEEEEeCCCcEEE
Q psy710 156 LDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGVDAHVR-HETDAAVIQMQFLTNEGALITATADDSLHL 234 (591)
Q Consensus 156 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~ 234 (591)
.+...+.+++|+|++++|++|+.||.|++||+.+.+.... ..+..+|.+++|+|++++|++++.|+.|++
T Consensus 162 ---------~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~i 232 (321)
T 3ow8_A 162 ---------TRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKI 232 (321)
T ss_dssp ---------CSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEE
T ss_pred ---------CCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEE
Confidence 3456689999999999999999999999999988776644 345779999999999999999999999999
Q ss_pred EEccCCCcceEEeeeeccccEEEEEecCCCCEEEEEeCCccEEEEEccCccccceeeehhhhccccccCCCCCeEEEecC
Q psy710 235 WNFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDN 314 (591)
Q Consensus 235 wd~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s 314 (591)
||++.. .....+.+|...|.+++|+|++++|++++.|+.|++||+.+++. ...+.+|...|.+++|+
T Consensus 233 wd~~~~--~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~-----------~~~~~~h~~~v~~v~~s 299 (321)
T 3ow8_A 233 YDVQHA--NLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTC-----------VHTFFDHQDQVWGVKYN 299 (321)
T ss_dssp EETTTC--CEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE-----------EEEECCCSSCEEEEEEC
T ss_pred EECCCc--ceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEE-----------EEEEcCCCCcEEEEEEC
Confidence 999987 68888999999999999999999999999999999999998776 33677899999999999
Q ss_pred CCCCCeEEEEEcCCEEEEEecc
Q psy710 315 PLDPSKLLLAYETGLVVHWDLK 336 (591)
Q Consensus 315 p~~~~~l~~~~~dg~i~iwd~~ 336 (591)
| ++++|++++.|+.|++||..
T Consensus 300 ~-~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 300 G-NGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp T-TSSEEEEEETTCCEEEEECC
T ss_pred C-CCCEEEEEeCCCeEEEEeCC
Confidence 9 99999999999999999964
No 13
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=7.6e-45 Score=353.00 Aligned_cols=328 Identities=12% Similarity=0.109 Sum_probs=239.6
Q ss_pred cEEEeCCCCcEEEEEeCCCcEEEEcCCCceeEeeccCCcceEEEEEeecCCEEEEecC------CCeEEEEeecccCc--
Q psy710 11 TAIAFDPIQKLLAIGTKTGSLRLLGRPGVDAHVRHETDAAVIQMQFLTNEGALITATA------DDSLHLWNFRQKRP-- 82 (591)
Q Consensus 11 ~~~~~spdg~~la~g~~dg~i~lw~~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~~~------d~~i~vw~~~~~~~-- 82 (591)
..+.+.+++.++.+ +.+.....|+++.. ....|+..|.+++|+|||++|++++. |+.|++|+..++.+
T Consensus 9 sg~d~g~~~~~~~~-~g~~~~~~w~~p~~---~p~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~ 84 (357)
T 4g56_B 9 SGVDLGTENLYFQS-NGSSKGSAWGRPVT---APACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNE 84 (357)
T ss_dssp -----------------------------------CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CG
T ss_pred cCCCCCccceEEec-CCCccccccCCCCC---CcccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcce
Confidence 45566676656554 44567899987632 23579999999999999999999997 77899999876642
Q ss_pred eeeeEEEeeccceEEEEeeCCceEEEEEeCCCcEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCcceee
Q psy710 83 EIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTF 162 (591)
Q Consensus 83 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (591)
........|...|.+++|+|+++++ +++.||.|++||+.+++...... ..
T Consensus 85 ~~~~~~~~~~~~V~~~~~s~d~~~l-~~s~dg~v~lWd~~~~~~~~~~~-----------------------------~~ 134 (357)
T 4g56_B 85 SLCTAGVQTEAGVTDVAWVSEKGIL-VASDSGAVELWEILEKESLLVNK-----------------------------FA 134 (357)
T ss_dssp GGCSEEEECSSCEEEEEEETTTEEE-EEETTSCEEEC--------CCCC-----------------------------EE
T ss_pred eEecccCCCCCCEEEEEEcCCCCEE-EEECCCEEEEeeccccceeEEEe-----------------------------ec
Confidence 2234556788899999999998654 57789999999998865432211 11
Q ss_pred eccCCCCceEEEECCCCCEEEEEeCCCcEEEeCCCCeEEEEe-ccCCCcEEEEEEEcCCc-eEEEEeCCCcEEEEEccCC
Q psy710 163 RHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGVDAHVR-HETDAAVIQMQFLTNEG-ALITATADDSLHLWNFRQK 240 (591)
Q Consensus 163 ~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~-~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~~wd~~~~ 240 (591)
..+|...|.+++|+|++++|++|+.|+.|++||..+.+.... ..+...|.+++|++++. .+++++.|+.|++||++++
T Consensus 135 ~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~ 214 (357)
T 4g56_B 135 KYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKP 214 (357)
T ss_dssp ECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSS
T ss_pred cCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCC
Confidence 246888999999999999999999999999999998877654 44577999999999885 7899999999999999987
Q ss_pred CcceEEeeeeccccEEEEEecCCC-CEEEEEeCCccEEEEEccCccccceeeehhhhccccccCCCCCeEEEecCCCCC-
Q psy710 241 RPEIVHSLKFQRERITYIHLPLQS-KWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDP- 318 (591)
Q Consensus 241 ~~~~~~~~~~~~~~v~~~~~sp~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~- 318 (591)
+......+..+...+.+++|+|++ .+|++|+.|+.|++||+++++. ...+.+|...|++++|+| ++
T Consensus 215 ~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~-----------~~~~~~~~~~v~~l~~sp-~~~ 282 (357)
T 4g56_B 215 KPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDS-----------AQTSAVHSQNITGLAYSY-HSS 282 (357)
T ss_dssp SCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGG-----------CEEECCCSSCEEEEEECS-SSS
T ss_pred ceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcE-----------eEEEeccceeEEEEEEcC-CCC
Confidence 433333444566789999999974 6889999999999999998776 346788999999999999 76
Q ss_pred CeEEEEEcCCEEEEEecccceEEEEeccCCCeeEEEEee-cCCEEEEEecCCcEEEEecCCCCCcee
Q psy710 319 SKLLLAYETGLVVHWDLKLKRAEFRWQCSEPIKSVCWHY-EGKQFLCSHTDGTISTWAVRPLAKPVS 384 (591)
Q Consensus 319 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp-~g~~l~s~~~dg~i~vwd~~~~~~~~~ 384 (591)
++|++++.|++|+|||++++++...+.|...|++++|+| ++++|++++.||+|++|++...++...
T Consensus 283 ~~lasgs~D~~i~iwd~~~~~~~~~~~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~~~~~~ 349 (357)
T 4g56_B 283 PFLASISEDCTVAVLDADFSEVFRDLSHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSEGRTEN 349 (357)
T ss_dssp CCEEEEETTSCEEEECTTSCEEEEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC-------
T ss_pred CEEEEEeCCCEEEEEECCCCcEeEECCCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccc
Confidence 689999999999999999999999999999999999998 899999999999999999985444433
No 14
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=2.2e-44 Score=391.01 Aligned_cols=307 Identities=14% Similarity=0.223 Sum_probs=262.7
Q ss_pred ccCCCCCCcEEEeCCCCcEEEEEeCCCcEEEEcCC-CceeEeeccCCcceEEEEEeecCCEEEEecCCCeEEEEeecccC
Q psy710 3 RHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRP-GVDAHVRHETDAAVIQMQFLTNEGALITATADDSLHLWNFRQKR 81 (591)
Q Consensus 3 ~~gh~~~v~~~~~spdg~~la~g~~dg~i~lw~~~-~~~~~~~~~h~~~v~~l~~sp~~~~l~s~~~d~~i~vw~~~~~~ 81 (591)
..+|++.|++++|+|+|++||+|+.||.|+|||+. +.....+..|..+|.+++|+|++++|++++.|+.|++||+.+++
T Consensus 9 ~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~ 88 (814)
T 3mkq_A 9 FSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGE 88 (814)
T ss_dssp EEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCC
T ss_pred eecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCc
Confidence 35799999999999999999999999999999987 67778889999999999999999999999999999999999884
Q ss_pred ceeeeEEEeeccceEEEEeeCCceEEEEEeCCCcEEEEEeeee-eeeceecccccccccCCCCCCCceeccCCCCcCcce
Q psy710 82 PEIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESF-TLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSK 160 (591)
Q Consensus 82 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (591)
.+..+.+|...|.+++|+|+++.|++++.|+.|++||+.++ .....+
T Consensus 89 --~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~------------------------------ 136 (814)
T 3mkq_A 89 --KVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTF------------------------------ 136 (814)
T ss_dssp --EEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEE------------------------------
T ss_pred --EEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEE------------------------------
Confidence 67888999999999999999999999999999999999875 333332
Q ss_pred eeeccCCCCceEEEECC-CCCEEEEEeCCCcEEEeCCCCeEEE--EeccCCCcEEEEEEEc--CCceEEEEeCCCcEEEE
Q psy710 161 TFRHGFPYQPTAIAFDP-IQKLLAIGTKTGSLRLLGRPGVDAH--VRHETDAAVIQMQFLT--NEGALITATADDSLHLW 235 (591)
Q Consensus 161 ~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~--~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~~w 235 (591)
.+|...|.+++|+| +++.+++++.||.|++||+...... ....+...+..++|+| ++++|++++.|+.|++|
T Consensus 137 ---~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~ 213 (814)
T 3mkq_A 137 ---EGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIW 213 (814)
T ss_dssp ---ECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEE
T ss_pred ---cCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEE
Confidence 25677899999999 8899999999999999998654432 2223346899999999 99999999999999999
Q ss_pred EccCCCcceEEeeeeccccEEEEEecCCCCEEEEEeCCccEEEEEccCccccceeeehhhhccccccCCCCCeEEEecCC
Q psy710 236 NFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNP 315 (591)
Q Consensus 236 d~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp 315 (591)
|+.++ +.+..+.+|...|.+++|+|+++++++++.||.|++||+.+++.. ..+..|...+.+++|+|
T Consensus 214 d~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~-----------~~~~~~~~~v~~~~~~~ 280 (814)
T 3mkq_A 214 DYQTK--SCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVE-----------KTLNVGLERSWCIATHP 280 (814)
T ss_dssp ETTTT--EEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCSEE-----------EEECCSSSSEEEEEECT
T ss_pred ECCCC--cEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEE-----------EEeecCCCcEEEEEEcc
Confidence 99987 788889999999999999999999999999999999999987663 35677888999999999
Q ss_pred CCCCe-EEEEEcCCEEEEEecccceEEEEeccCCCeeEEEEeecCCEEEEEecCC
Q psy710 316 LDPSK-LLLAYETGLVVHWDLKLKRAEFRWQCSEPIKSVCWHYEGKQFLCSHTDG 369 (591)
Q Consensus 316 ~~~~~-l~~~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~g~~l~s~~~dg 369 (591)
++.. +++++.++.+.+|++... ...++++|+|+.+++++.+.
T Consensus 281 -~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~g~~~~~~~~~~ 323 (814)
T 3mkq_A 281 -TGRKNYIASGFDNGFTVLSLGND-----------EPTLSLDPVGKLVWSGGKNA 323 (814)
T ss_dssp -TCGGGEEEEEETTEEEEEECSCC-----------SCCEEECSSSEEEEECCTTS
T ss_pred -CCCceEEEEEeCCCEEEEEcCCC-----------CceeEECCCCCEEEECcccc
Confidence 8763 355555677888987543 23466777777777766554
No 15
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=6.9e-44 Score=344.51 Aligned_cols=293 Identities=12% Similarity=0.141 Sum_probs=254.9
Q ss_pred ceeEeeccCCcceEEEEEeecCCEEEEecCCCeEEEEeecccCceeeeEEEeeccceEEEEeeCCceEEEEEeCCCcEEE
Q psy710 39 VDAHVRHETDAAVIQMQFLTNEGALITATADDSLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHV 118 (591)
Q Consensus 39 ~~~~~~~~h~~~v~~l~~sp~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v 118 (591)
.....+.+|.+.|.+++|+|++++|++++.|++|++||+.+++ .+..+..|...|.+++|+|++++|++++.|+.|++
T Consensus 46 ~~~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~--~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~i 123 (340)
T 1got_B 46 RTRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTN--KVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSI 123 (340)
T ss_dssp CEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCC--EEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEE
T ss_pred hhheeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCC--cceEeecCCccEEEEEECCCCCEEEEEeCCCeEEE
Confidence 4556789999999999999999999999999999999998874 67888899999999999999999999999999999
Q ss_pred EEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCCCCEEEEEeCCCcEEEeCCCC
Q psy710 119 VNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPG 198 (591)
Q Consensus 119 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~ 198 (591)
|++.+.+... .....+ .+|...+.++.|++++. +++++.|+.|++||+.+
T Consensus 124 w~~~~~~~~~----------------------------~~~~~~-~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~ 173 (340)
T 1got_B 124 YNLKTREGNV----------------------------RVSREL-AGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIET 173 (340)
T ss_dssp EETTTCSBSC----------------------------EEEEEE-ECCSSCEEEEEEEETTE-EEEEETTSCEEEEETTT
T ss_pred EECccCCCcc----------------------------eeEEEe-cCCCccEEEEEECCCCc-EEEEECCCcEEEEECCC
Confidence 9987632100 011111 36788899999998875 88999999999999988
Q ss_pred eEEEEe-ccCCCcEEEEEEEcCCceEEEEeCCCcEEEEEccCCCcceEEeeeeccccEEEEEecCCCCEEEEEeCCccEE
Q psy710 199 VDAHVR-HETDAAVIQMQFLTNEGALITATADDSLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIH 277 (591)
Q Consensus 199 ~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~ 277 (591)
.+.... ..|...|.+++|+|++++|++++.|+.|++||++++ ..+..+.+|...|.+++|+|++++|++|+.|+.|+
T Consensus 174 ~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~--~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~ 251 (340)
T 1got_B 174 GQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREG--MCRQTFTGHESDINAICFFPNGNAFATGSDDATCR 251 (340)
T ss_dssp TEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTC--SEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred CcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCC--eeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEE
Confidence 776543 446779999999999999999999999999999988 78889999999999999999999999999999999
Q ss_pred EEEccCccccceeeehhhhccccccCCCCCeEEEecCCCCCCeEEEEEcCCEEEEEecccceEEEEec-cCCCeeEEEEe
Q psy710 278 VVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKLLLAYETGLVVHWDLKLKRAEFRWQ-CSEPIKSVCWH 356 (591)
Q Consensus 278 i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~s 356 (591)
+||+++.+... ......+...|.+++|+| ++++|++|+.|+.|++||+.+++....+. |...|.+++|+
T Consensus 252 iwd~~~~~~~~---------~~~~~~~~~~v~~~~~s~-~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s 321 (340)
T 1got_B 252 LFDLRADQELM---------TYSHDNIICGITSVSFSK-SGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVT 321 (340)
T ss_dssp EEETTTTEEEE---------EECCTTCCSCEEEEEECT-TSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEC
T ss_pred EEECCCCcEEE---------EEccCCcccceEEEEECC-CCCEEEEECCCCeEEEEEcccCcEeeEeecCCCcEEEEEEc
Confidence 99998865421 112233456799999999 99999999999999999999988776665 99999999999
Q ss_pred ecCCEEEEEecCCcEEEEe
Q psy710 357 YEGKQFLCSHTDGTISTWA 375 (591)
Q Consensus 357 p~g~~l~s~~~dg~i~vwd 375 (591)
|+|++|++++.||.|++||
T Consensus 322 ~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 322 DDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp TTSSCEEEEETTSCEEEEC
T ss_pred CCCCEEEEEcCCccEEecC
Confidence 9999999999999999997
No 16
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=2e-43 Score=371.21 Aligned_cols=397 Identities=12% Similarity=0.149 Sum_probs=319.3
Q ss_pred cCCCCC-CcEEEeCC--CCcEEEEEeCCCcEEEEcCC-C--------ceeEeeccCCcceEEEEEeecCCEEEEecCC--
Q psy710 4 HGFPYQ-PTAIAFDP--IQKLLAIGTKTGSLRLLGRP-G--------VDAHVRHETDAAVIQMQFLTNEGALITATAD-- 69 (591)
Q Consensus 4 ~gh~~~-v~~~~~sp--dg~~la~g~~dg~i~lw~~~-~--------~~~~~~~~h~~~v~~l~~sp~~~~l~s~~~d-- 69 (591)
.+|... |++++|+| ++++||+|+.||.|++||+. + .....+..|...|.+++|+|++++|++++.+
T Consensus 60 ~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~ 139 (615)
T 1pgu_A 60 TGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRD 139 (615)
T ss_dssp CTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSS
T ss_pred ecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCC
Confidence 579999 99999999 99999999999999999985 3 4566778899999999999999999999987
Q ss_pred --CeEEEEeecccCceeeeEEEeeccceEEEEeeCCce-EEEEEeCCCcEEEEEeeeeeeeceeccccc---ccccC-CC
Q psy710 70 --DSLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQSK-WLYVGTEKGNIHVVNIESFTLSGYIINWNK---AIDVC-MK 142 (591)
Q Consensus 70 --~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~---~~~~~-~~ 142 (591)
+.|.+|| .+ ..+..+.+|...|.+++|+|+++ .+++++.|+.|++||+.+++....+..+.. .+... ++
T Consensus 140 ~~~~v~~~d--~~--~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~ 215 (615)
T 1pgu_A 140 NFGVFISWD--SG--NSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFS 215 (615)
T ss_dssp CSEEEEETT--TC--CEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEEC
T ss_pred CccEEEEEE--CC--CcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEEC
Confidence 6899998 33 36788889999999999999998 899999999999999999998888887766 44322 45
Q ss_pred CC-CCce---------eccCCCCcCcceeeec---cCCCCceEEEECCCCCEEEEEeCCCcEEEeCCCCeEEEEeccC--
Q psy710 143 TH-PGPI---------IHLSDNPLDPSKTFRH---GFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGVDAHVRHET-- 207 (591)
Q Consensus 143 ~~-~~~~---------~~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-- 207 (591)
++ +..+ ..+.....+....+.. +|...|.+++|+ +++++++++.||.|++||+.+.+.......
T Consensus 216 ~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~ 294 (615)
T 1pgu_A 216 PDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKWTLDK 294 (615)
T ss_dssp STTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEEECCT
T ss_pred CCCCCEEEEEeCCCeEEEEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCC
Confidence 55 4433 2333344455555534 788999999999 999999999999999999987776644333
Q ss_pred ---CCcEEEEEEEcCCceEEEEeCCCcEEEEEccCCCcceEEeeeeccccEEEEEecCC---------------------
Q psy710 208 ---DAAVIQMQFLTNEGALITATADDSLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQ--------------------- 263 (591)
Q Consensus 208 ---~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~sp~--------------------- 263 (591)
...+.++.|. +++++++++.|+.|++||+.++ +.+..+.+|...|.+++| |+
T Consensus 295 ~~~~~~~~~~~~~-~~~~l~~~~~~g~i~~~d~~~~--~~~~~~~~~~~~v~~~~~-~~l~~~~~dg~i~~w~~~~~~~~ 370 (615)
T 1pgu_A 295 QQLGNQQVGVVAT-GNGRIISLSLDGTLNFYELGHD--EVLKTISGHNKGITALTV-NPLISGSYDGRIMEWSSSSMHQD 370 (615)
T ss_dssp TCGGGCEEEEEEE-ETTEEEEEETTSCEEEEETTEE--EEEEEECCCSSCEEEEET-TTTEEEETTSCEEETTTTEEECC
T ss_pred CcccCceeEEEeC-CCCeEEEEECCCCEEEEECCCC--cEEEEEeCCCCCEEEEEe-cCcEEECCCCeEEEEEchhhcCc
Confidence 3578888886 8899999999999999999876 666677666666655555 43
Q ss_pred ------------CCEEEEEeCCccEEEEEccCccc---------------------------------------------
Q psy710 264 ------------SKWLYVGTEKGNIHVVNIESFTL--------------------------------------------- 286 (591)
Q Consensus 264 ------------~~~l~~~~~dg~i~i~d~~~~~~--------------------------------------------- 286 (591)
++.+++++.|+.+++|++.+.+.
T Consensus 371 ~~~~v~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 450 (615)
T 1pgu_A 371 HSNLIVSLDNSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGS 450 (615)
T ss_dssp CCSCEEEEECCSTTCCEEEETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEE
T ss_pred ccCceEEEEECCCcEEEEEeCCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCceeeecccCCCce
Confidence 56666677777777776654221
Q ss_pred ---------------cceeeehhhh---cc-ccccCCCCCeEEEecCCCCCCeEEEEEcCCEEEEEecccceEEEEec--
Q psy710 287 ---------------SGYIINWNKA---ID-VCMKTHPGPIIHLSDNPLDPSKLLLAYETGLVVHWDLKLKRAEFRWQ-- 345 (591)
Q Consensus 287 ---------------~~~~~~~~~~---~~-~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-- 345 (591)
.+....|+.. .. ..+..|...|.+++|+| ++++|++++.|+.|++||+.+++.+..+.
T Consensus 451 ~~~~~~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~ 529 (615)
T 1pgu_A 451 AVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISP-SETYIAAGDVMGKILLYDLQSREVKTSRWAF 529 (615)
T ss_dssp EEEECSSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEECCSCC
T ss_pred EEEEcCCEEEEeecCCCeEEEEECCCccccccccCCccCceEEEEECC-CCCEEEEcCCCCeEEEeeCCCCcceeEeecC
Confidence 0000001100 00 45678999999999999 99999999999999999999999888776
Q ss_pred cCCCeeEEEEee----------cCCEEEEEecCCcEEEEecCCCCCceeeecccccccCCCCCCCCCcceEEEEeecCCC
Q psy710 346 CSEPIKSVCWHY----------EGKQFLCSHTDGTISTWAVRPLAKPVSVNQPHIKTNKDGKLEQCKPIQKVEWKHSRSG 415 (591)
Q Consensus 346 ~~~~v~~~~~sp----------~g~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 415 (591)
|...|++++|+| ++++|++++.||.|++||+....+++..+.+| ..+|.+++|+|
T Consensus 530 h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h-----------~~~v~~l~~s~---- 594 (615)
T 1pgu_A 530 RTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAH-----------KDGVNNLLWET---- 594 (615)
T ss_dssp CSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEETTSS-----------TTCEEEEEEEE----
T ss_pred CCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCCceechhhhcC-----------ccceEEEEEcC----
Confidence 899999999999 99999999999999999999544889999999 89999999998
Q ss_pred CcEEEEECCcc
Q psy710 416 EGFVIFSGGLT 426 (591)
Q Consensus 416 ~~~~l~~g~~~ 426 (591)
++. |++++.+
T Consensus 595 ~~~-l~s~~~d 604 (615)
T 1pgu_A 595 PST-LVSSGAD 604 (615)
T ss_dssp TTE-EEEEETT
T ss_pred CCC-eEEecCC
Confidence 445 7777654
No 17
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=3.9e-44 Score=346.26 Aligned_cols=284 Identities=13% Similarity=0.158 Sum_probs=251.5
Q ss_pred ccCCCCCCcEEEeCCCCcEEEEEeCCCcEEEEcCC-CceeEeeccCCcceEEEEEeecCCEEEEecCCCeEEEEeecccC
Q psy710 3 RHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRP-GVDAHVRHETDAAVIQMQFLTNEGALITATADDSLHLWNFRQKR 81 (591)
Q Consensus 3 ~~gh~~~v~~~~~spdg~~la~g~~dg~i~lw~~~-~~~~~~~~~h~~~v~~l~~sp~~~~l~s~~~d~~i~vw~~~~~~ 81 (591)
..||.+.|++++|+||+++|++|+.||+|++||.. +.....+..|...|.+++|+|++++|++++.|+.+++|++.+.+
T Consensus 51 l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~ 130 (340)
T 1got_B 51 LRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTRE 130 (340)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCS
T ss_pred ecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCC
Confidence 35899999999999999999999999999999977 67778889999999999999999999999999999999998653
Q ss_pred c--eeeeEEEeeccceEEEEeeCCceEEEEEeCCCcEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCcc
Q psy710 82 P--EIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPS 159 (591)
Q Consensus 82 ~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (591)
. .....+.+|.+.|.++.|++++. +++++.|+.|++||+.+++....+.
T Consensus 131 ~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~~~~~~~---------------------------- 181 (340)
T 1got_B 131 GNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFT---------------------------- 181 (340)
T ss_dssp BSCEEEEEEECCSSCEEEEEEEETTE-EEEEETTSCEEEEETTTTEEEEEEC----------------------------
T ss_pred CcceeEEEecCCCccEEEEEECCCCc-EEEEECCCcEEEEECCCCcEEEEEc----------------------------
Confidence 2 35667889999999999998876 8899999999999999877665554
Q ss_pred eeeeccCCCCceEEEECCCCCEEEEEeCCCcEEEeCCCCeEEEE-eccCCCcEEEEEEEcCCceEEEEeCCCcEEEEEcc
Q psy710 160 KTFRHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGVDAHV-RHETDAAVIQMQFLTNEGALITATADDSLHLWNFR 238 (591)
Q Consensus 160 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~ 238 (591)
+|...|.+++|+|+++++++|+.|+.|++||+....... ...+...|.+++|+|++++|++++.|+.|++||++
T Consensus 182 -----~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~ 256 (340)
T 1got_B 182 -----GHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLR 256 (340)
T ss_dssp -----CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred -----CCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECC
Confidence 567788999999999999999999999999998776554 34467799999999999999999999999999999
Q ss_pred CCCcceEEeeee--ccccEEEEEecCCCCEEEEEeCCccEEEEEccCccccceeeehhhhccccccCCCCCeEEEecCCC
Q psy710 239 QKRPEIVHSLKF--QRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPL 316 (591)
Q Consensus 239 ~~~~~~~~~~~~--~~~~v~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~ 316 (591)
.. +.+..+.. +...|.+++|+|++++|++|+.|+.|++||+.+.+. ...+.+|...|.+++|+|
T Consensus 257 ~~--~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~-----------~~~~~~h~~~v~~~~~s~- 322 (340)
T 1got_B 257 AD--QELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADR-----------AGVLAGHDNRVSCLGVTD- 322 (340)
T ss_dssp TT--EEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCE-----------EEEEECCSSCEEEEEECT-
T ss_pred CC--cEEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccCcE-----------eeEeecCCCcEEEEEEcC-
Confidence 87 55555543 234799999999999999999999999999988765 336789999999999999
Q ss_pred CCCeEEEEEcCCEEEEEe
Q psy710 317 DPSKLLLAYETGLVVHWD 334 (591)
Q Consensus 317 ~~~~l~~~~~dg~i~iwd 334 (591)
++.+|++|+.|+.|++||
T Consensus 323 dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 323 DGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp TSSCEEEEETTSCEEEEC
T ss_pred CCCEEEEEcCCccEEecC
Confidence 999999999999999997
No 18
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=5.6e-44 Score=339.32 Aligned_cols=284 Identities=14% Similarity=0.256 Sum_probs=247.7
Q ss_pred cCCCCCCcEEEeCCCCcEEEEEeCCCcEEEEcCC-CceeEeeccCCcceEEEEEeecCCEEEEecCCCeEEEEeecccCc
Q psy710 4 HGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRP-GVDAHVRHETDAAVIQMQFLTNEGALITATADDSLHLWNFRQKRP 82 (591)
Q Consensus 4 ~gh~~~v~~~~~spdg~~la~g~~dg~i~lw~~~-~~~~~~~~~h~~~v~~l~~sp~~~~l~s~~~d~~i~vw~~~~~~~ 82 (591)
.+|.+.|++++|+|+|++||+|+.||.|++||++ +..+..+..|..+|.+++|+|++++|++++.|++|++||+.+++
T Consensus 10 ~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~- 88 (304)
T 2ynn_A 10 SNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGE- 88 (304)
T ss_dssp EEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCC-
T ss_pred cCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCc-
Confidence 5799999999999999999999999999999988 66778899999999999999999999999999999999999884
Q ss_pred eeeeEEEeeccceEEEEeeCCceEEEEEeCCCcEEEEEeeeee-eeceecccccccccCCCCCCCceeccCCCCcCccee
Q psy710 83 EIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFT-LSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKT 161 (591)
Q Consensus 83 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (591)
.+..+.+|...|.+++|+|++++|++++.|++|++||++++. ....+
T Consensus 89 -~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~------------------------------- 136 (304)
T 2ynn_A 89 -KVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTF------------------------------- 136 (304)
T ss_dssp -EEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEE-------------------------------
T ss_pred -EEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhh-------------------------------
Confidence 688899999999999999999999999999999999998752 22222
Q ss_pred eeccCCCCceEEEECC-CCCEEEEEeCCCcEEEeCCCCeEE--EEeccCCCcEEEEEEEc--CCceEEEEeCCCcEEEEE
Q psy710 162 FRHGFPYQPTAIAFDP-IQKLLAIGTKTGSLRLLGRPGVDA--HVRHETDAAVIQMQFLT--NEGALITATADDSLHLWN 236 (591)
Q Consensus 162 ~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~--~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~~wd 236 (591)
.+|...|.+++|+| ++.+|++|+.|+.|++||+..... .....+...+..+.|+| ++++|++++.|+.|++||
T Consensus 137 --~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd 214 (304)
T 2ynn_A 137 --EGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWD 214 (304)
T ss_dssp --CCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEE
T ss_pred --cccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEe
Confidence 36788899999999 678999999999999999865432 22233446889999987 678999999999999999
Q ss_pred ccCCCcceEEeeeeccccEEEEEecCCCCEEEEEeCCccEEEEEccCccccceeeehhhhccccccCCCCCeEEEecCCC
Q psy710 237 FRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPL 316 (591)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~ 316 (591)
++++ +++..+.+|...|.+++|+|++++|++|+.||.|++||+.+++.. ..+..|...+.+++|+|
T Consensus 215 ~~~~--~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~-----------~~~~~~~~~~~~~~~~~- 280 (304)
T 2ynn_A 215 YQTK--SCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVE-----------KTLNVGLERSWCIATHP- 280 (304)
T ss_dssp TTTT--EEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEE-----------EEECCSSSSEEEEEECT-
T ss_pred CCCC--ccceeeCCCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCCcee-----------eeccCCCccEEEEEECC-
Confidence 9988 789999999999999999999999999999999999999988763 36678889999999999
Q ss_pred CCC--eEEEEEcCCEEEEEeccc
Q psy710 317 DPS--KLLLAYETGLVVHWDLKL 337 (591)
Q Consensus 317 ~~~--~l~~~~~dg~i~iwd~~~ 337 (591)
++. ++++|+.|| +.+|++..
T Consensus 281 ~~~~~~~asg~~~g-~~~~~~~~ 302 (304)
T 2ynn_A 281 TGRKNYIASGFDNG-FTVLSLGN 302 (304)
T ss_dssp TCGGGCEEEEETTE-EEEEECC-
T ss_pred CCCceEEEEecCCc-eEEEEecc
Confidence 664 477777666 55887764
No 19
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=1.4e-43 Score=342.77 Aligned_cols=323 Identities=13% Similarity=0.137 Sum_probs=279.0
Q ss_pred CCCCCCcEEEeCCCCcEEEEEeCCCcEEEEcCC-CceeEeeccCCcceEEEEEeecCCEEEEecCCCeEEEEeecccCc-
Q psy710 5 GFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRP-GVDAHVRHETDAAVIQMQFLTNEGALITATADDSLHLWNFRQKRP- 82 (591)
Q Consensus 5 gh~~~v~~~~~spdg~~la~g~~dg~i~lw~~~-~~~~~~~~~h~~~v~~l~~sp~~~~l~s~~~d~~i~vw~~~~~~~- 82 (591)
-|.+.|.+++|+|||++++++..++.+.+|... ........+|...|.+++|+|++++|++++ |+.|++|++.+++.
T Consensus 7 ~~~~~v~~~~~s~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~ 85 (337)
T 1gxr_A 7 MGSKPAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQINTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNK 85 (337)
T ss_dssp EEEEECCEEEECSSSCEEECCCCTTSSSSTTCCSEEEEEEEECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCC
T ss_pred ccCCceeEEEECCCCCEEEeecCCCcEeccccCCccccceeccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCce
Confidence 466789999999999999998888877777765 334444558999999999999999999998 99999999987642
Q ss_pred eeeeEEE--eeccceEEEEeeCCceEEEEEeCCCcEEEEEeeeeee--eceecccccccccCCCCCCCceeccCCCCcCc
Q psy710 83 EIVHSLK--FQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTL--SGYIINWNKAIDVCMKTHPGPIIHLSDNPLDP 158 (591)
Q Consensus 83 ~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (591)
.....+. .|...|.+++|+|++++|++++.|+.|++||+.+++. ...+
T Consensus 86 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~---------------------------- 137 (337)
T 1gxr_A 86 SPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAEL---------------------------- 137 (337)
T ss_dssp SCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEE----------------------------
T ss_pred eeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeec----------------------------
Confidence 1233333 6889999999999999999999999999999987652 1111
Q ss_pred ceeeeccCCCCceEEEECCCCCEEEEEeCCCcEEEeCCCCeEEEEe-ccCCCcEEEEEEEcCCceEEEEeCCCcEEEEEc
Q psy710 159 SKTFRHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGVDAHVR-HETDAAVIQMQFLTNEGALITATADDSLHLWNF 237 (591)
Q Consensus 159 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~ 237 (591)
.++...+.+++|+|+++++++++.+|.|++||+.+.+.... ..+...+.+++|+|++++|++++.|+.|++||+
T Consensus 138 -----~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~ 212 (337)
T 1gxr_A 138 -----TSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDL 212 (337)
T ss_dssp -----ECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred -----ccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEEC
Confidence 24667789999999999999999999999999988776544 345779999999999999999999999999999
Q ss_pred cCCCcceEEeeeeccccEEEEEecCCCCEEEEEeCCccEEEEEccCccccceeeehhhhccccccCCCCCeEEEecCCCC
Q psy710 238 RQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLD 317 (591)
Q Consensus 238 ~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~ 317 (591)
+++ +.+..+. +...+.+++|+|+++++++++.++.|++||+.+.+.. .+..|...|.+++|+| +
T Consensus 213 ~~~--~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~------------~~~~~~~~v~~~~~~~-~ 276 (337)
T 1gxr_A 213 REG--RQLQQHD-FTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKY------------QLHLHESCVLSLKFAY-C 276 (337)
T ss_dssp TTT--EEEEEEE-CSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEE------------EECCCSSCEEEEEECT-T
T ss_pred CCC--ceEeeec-CCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeE------------EEcCCccceeEEEECC-C
Confidence 987 5665554 5688999999999999999999999999999987642 4567899999999999 9
Q ss_pred CCeEEEEEcCCEEEEEecccceEEEEeccCCCeeEEEEeecCCEEEEEecCCcEEEEecC
Q psy710 318 PSKLLLAYETGLVVHWDLKLKRAEFRWQCSEPIKSVCWHYEGKQFLCSHTDGTISTWAVR 377 (591)
Q Consensus 318 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~g~~l~s~~~dg~i~vwd~~ 377 (591)
+++|++++.||.|++||+.+++......|...|.+++|+|++++|++++.||.|++|++.
T Consensus 277 ~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 336 (337)
T 1gxr_A 277 GKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISVDDKYIVTGSGDKKATVYEVI 336 (337)
T ss_dssp SSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECTTSCEEEEEETTSCEEEEEEE
T ss_pred CCEEEEecCCCcEEEEECCCCeEEEEecCCCcEEEEEECCCCCEEEEecCCCeEEEEEEe
Confidence 999999999999999999999998888899999999999999999999999999999974
No 20
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=3e-43 Score=340.59 Aligned_cols=308 Identities=11% Similarity=0.106 Sum_probs=247.2
Q ss_pred eeEeeccCCc-ceEEEEEeecCCEEEEecCCCeEEEEeecccCceeee-EEEeeccceEEEEeeCCceEEEEEeCCCcEE
Q psy710 40 DAHVRHETDA-AVIQMQFLTNEGALITATADDSLHLWNFRQKRPEIVH-SLKFQRERITYIHLPLQSKWLYVGTEKGNIH 117 (591)
Q Consensus 40 ~~~~~~~h~~-~v~~l~~sp~~~~l~s~~~d~~i~vw~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~ 117 (591)
.+..+.+|.. .|++++|+|++++|++++.|++|++||+.++...... ...+|...|.+++|+|++++|++++.|+.++
T Consensus 7 ~~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~ 86 (345)
T 3fm0_A 7 LLGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTC 86 (345)
T ss_dssp EEEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred EeeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEE
Confidence 4567788987 9999999999999999999999999999876422222 2357999999999999999999999999999
Q ss_pred EEEeeeeee--eceecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCCCCEEEEEeCCCcEEEeC
Q psy710 118 VVNIESFTL--SGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLG 195 (591)
Q Consensus 118 vwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d 195 (591)
+|++..+.. ...+ .+|...|.+++|+|++++|++++.|+.|++||
T Consensus 87 iw~~~~~~~~~~~~~---------------------------------~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd 133 (345)
T 3fm0_A 87 IWKKNQDDFECVTTL---------------------------------EGHENEVKSVAWAPSGNLLATCSRDKSVWVWE 133 (345)
T ss_dssp EEEECCC-EEEEEEE---------------------------------CCCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred EEEccCCCeEEEEEc---------------------------------cCCCCCceEEEEeCCCCEEEEEECCCeEEEEE
Confidence 999876532 2222 36788899999999999999999999999999
Q ss_pred CCCe---EE-EEeccCCCcEEEEEEEcCCceEEEEeCCCcEEEEEccCCCcceEEeeeeccccEEEEEecCCCCEEEEEe
Q psy710 196 RPGV---DA-HVRHETDAAVIQMQFLTNEGALITATADDSLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGT 271 (591)
Q Consensus 196 ~~~~---~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~ 271 (591)
+... .. .....+...|.+++|+|++++|++++.|+.|++||.+.....+...+.+|...|.+++|+|++++|++++
T Consensus 134 ~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s 213 (345)
T 3fm0_A 134 VDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCS 213 (345)
T ss_dssp ECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred CCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEe
Confidence 8654 22 2344567799999999999999999999999999998874446678889999999999999999999999
Q ss_pred CCccEEEEEccCccccceee------ehhhhccccccCCCCCeEEEecCCCCCCeEEEEEcCCEEEEEecccce------
Q psy710 272 EKGNIHVVNIESFTLSGYII------NWNKAIDVCMKTHPGPIIHLSDNPLDPSKLLLAYETGLVVHWDLKLKR------ 339 (591)
Q Consensus 272 ~dg~i~i~d~~~~~~~~~~~------~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~iwd~~~~~------ 339 (591)
.|++|++|+........... .+ ..+......|...|.+++|+| ++..|++++.|+.|++|+...+.
T Consensus 214 ~D~~v~iW~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~h~~~v~~v~~~~-~~~~l~s~~~d~~i~vw~~~~~~~~~~~~ 291 (345)
T 3fm0_A 214 DDRTVRIWRQYLPGNEQGVACSGSDPSW-KCICTLSGFHSRTIYDIAWCQ-LTGALATACGDDAIRVFQEDPNSDPQQPT 291 (345)
T ss_dssp TTSCEEEEEEECTTCTTCCCCC---CEE-EEEEEECSSCSSCEEEEEECT-TTCCEEEEETTSCEEEEEECTTSCTTSCC
T ss_pred CCCeEEEeccccCCCCccceeeccCCcc-ceeEEecCCCCCcEEEEEEec-CCCEEEEEeCCCeEEEEEeCCCCCcceee
Confidence 99999999975432210000 00 001111223888999999999 99999999999999999987542
Q ss_pred --EEE-E-eccCCCeeEEEEeecC-CEEEEEecCCcEEEEecCCCCCce
Q psy710 340 --AEF-R-WQCSEPIKSVCWHYEG-KQFLCSHTDGTISTWAVRPLAKPV 383 (591)
Q Consensus 340 --~~~-~-~~~~~~v~~~~~sp~g-~~l~s~~~dg~i~vwd~~~~~~~~ 383 (591)
... . ..|...|++++|+|++ .+||+++.||+|++|++. .++.+
T Consensus 292 ~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~-~~~~~ 339 (345)
T 3fm0_A 292 FSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQ-RPEGL 339 (345)
T ss_dssp EEEEEEETTSSSSCEEEEEECSSSTTEEEEEETTSCEEEEEEC-C----
T ss_pred EEEEeeecccccCcEeEeEEeCCCceEEEEcCCCCcEEEEEec-CCCCc
Confidence 111 2 2488999999999998 599999999999999999 44433
No 21
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.4e-43 Score=342.87 Aligned_cols=307 Identities=15% Similarity=0.175 Sum_probs=246.7
Q ss_pred cCCCC-CCcEEEeCCCCcEEEEEeCCCcEEEEcCCCce----eEeeccCCcceEEEEEeecCCEEEEecCCCeEEEEeec
Q psy710 4 HGFPY-QPTAIAFDPIQKLLAIGTKTGSLRLLGRPGVD----AHVRHETDAAVIQMQFLTNEGALITATADDSLHLWNFR 78 (591)
Q Consensus 4 ~gh~~-~v~~~~~spdg~~la~g~~dg~i~lw~~~~~~----~~~~~~h~~~v~~l~~sp~~~~l~s~~~d~~i~vw~~~ 78 (591)
.+|+. .|.+++|+|+|++||+|+.|++|+|||+++.. .....+|...|.+++|+|++++|++++.|+++++|++.
T Consensus 12 ~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~ 91 (345)
T 3fm0_A 12 PAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKN 91 (345)
T ss_dssp CCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEEC
T ss_pred cCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEEcc
Confidence 47887 99999999999999999999999999987442 22346899999999999999999999999999999998
Q ss_pred ccCceeeeEEEeeccceEEEEeeCCceEEEEEeCCCcEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCc
Q psy710 79 QKRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDP 158 (591)
Q Consensus 79 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (591)
.+..+.+..+.+|...|.+++|+|++++|++++.|+.|++||+.++.....+
T Consensus 92 ~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~---------------------------- 143 (345)
T 3fm0_A 92 QDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECV---------------------------- 143 (345)
T ss_dssp CC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEE----------------------------
T ss_pred CCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEE----------------------------
Confidence 8765677889999999999999999999999999999999999764211110
Q ss_pred ceeeeccCCCCceEEEECCCCCEEEEEeCCCcEEEeCCCCeEE---EEeccCCCcEEEEEEEcCCceEEEEeCCCcEEEE
Q psy710 159 SKTFRHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGVDA---HVRHETDAAVIQMQFLTNEGALITATADDSLHLW 235 (591)
Q Consensus 159 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~---~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~w 235 (591)
.. ..+|...|.+++|+|++++|++++.|+.|++|+...... .....|...|.+++|+|++++|++++.|++|++|
T Consensus 144 -~~-~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW 221 (345)
T 3fm0_A 144 -SV-LNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIW 221 (345)
T ss_dssp -EE-ECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred -EE-ecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEe
Confidence 11 135778899999999999999999999999999876542 2345567799999999999999999999999999
Q ss_pred EccCCC-------------cceEEeeee-ccccEEEEEecCCCCEEEEEeCCccEEEEEccCccccceeeehhhhccccc
Q psy710 236 NFRQKR-------------PEIVHSLKF-QRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCM 301 (591)
Q Consensus 236 d~~~~~-------------~~~~~~~~~-~~~~v~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~ 301 (591)
|..... ..++..+.+ |...|.+++|+|++..|++++.|+.|++|+........... + .......
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~-~-~~~~~~~ 299 (345)
T 3fm0_A 222 RQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPT-F-SLTAHLH 299 (345)
T ss_dssp EEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCC-E-EEEEEET
T ss_pred ccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceee-E-EEEeeec
Confidence 974321 123344444 77899999999999999999999999999987653211000 0 0001234
Q ss_pred cCCCCCeEEEecCCCCC-CeEEEEEcCCEEEEEecccceEEEE
Q psy710 302 KTHPGPIIHLSDNPLDP-SKLLLAYETGLVVHWDLKLKRAEFR 343 (591)
Q Consensus 302 ~~~~~~v~~~~~sp~~~-~~l~~~~~dg~i~iwd~~~~~~~~~ 343 (591)
.+|...|++++|+| ++ .+|++++.||.|++|++.+++....
T Consensus 300 ~~h~~~V~~v~~~p-~~~~~laS~s~Dg~v~~W~~~~~~~~~~ 341 (345)
T 3fm0_A 300 QAHSQDVNCVAWNP-KEPGLLASCSDDGEVAFWKYQRPEGLHH 341 (345)
T ss_dssp TSSSSCEEEEEECS-SSTTEEEEEETTSCEEEEEECC------
T ss_pred ccccCcEeEeEEeC-CCceEEEEcCCCCcEEEEEecCCCCccc
Confidence 68999999999999 76 5999999999999999998776543
No 22
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=4.1e-43 Score=335.70 Aligned_cols=288 Identities=15% Similarity=0.209 Sum_probs=253.1
Q ss_pred eEeeccCCcceEEEEEeecC-CEEEEecCCCeEEEEeecccCc---eeeeEEEeeccceEEEEeeCCceEEEEEeCCCcE
Q psy710 41 AHVRHETDAAVIQMQFLTNE-GALITATADDSLHLWNFRQKRP---EIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNI 116 (591)
Q Consensus 41 ~~~~~~h~~~v~~l~~sp~~-~~l~s~~~d~~i~vw~~~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i 116 (591)
...+.+|.+.|.+++|+|++ ++|++++.|++|++|++..... ..+..+.+|...|.+++|+|++++|++++.|++|
T Consensus 10 ~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v 89 (319)
T 3frx_A 10 RGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTL 89 (319)
T ss_dssp EEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred EEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEE
Confidence 34688999999999999975 8999999999999999975432 3467889999999999999999999999999999
Q ss_pred EEEEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCCCCEEEEEeCCCcEEEeCC
Q psy710 117 HVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGR 196 (591)
Q Consensus 117 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~ 196 (591)
++||+.+++....+. +|...|.+++|+|+++++++|+.|+.|++||+
T Consensus 90 ~~wd~~~~~~~~~~~---------------------------------~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~ 136 (319)
T 3frx_A 90 RLWDVATGETYQRFV---------------------------------GHKSDVMSVDIDKKASMIISGSRDKTIKVWTI 136 (319)
T ss_dssp EEEETTTTEEEEEEE---------------------------------CCSSCEEEEEECTTSCEEEEEETTSCEEEEET
T ss_pred EEEECCCCCeeEEEc---------------------------------cCCCcEEEEEEcCCCCEEEEEeCCCeEEEEEC
Confidence 999999887666554 67788999999999999999999999999999
Q ss_pred CCeEEEEeccCCCcEEEEEEEcCC------ceEEEEeCCCcEEEEEccCCCcceEEeeeeccccEEEEEecCCCCEEEEE
Q psy710 197 PGVDAHVRHETDAAVIQMQFLTNE------GALITATADDSLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVG 270 (591)
Q Consensus 197 ~~~~~~~~~~~~~~v~~~~~~~~~------~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~ 270 (591)
..........+...+.++.|+|.+ ..|++++.|+.|++||+++. +....+.+|...|.+++|+|++++|+++
T Consensus 137 ~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~--~~~~~~~~h~~~v~~~~~sp~g~~l~s~ 214 (319)
T 3frx_A 137 KGQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQF--QIEADFIGHNSNINTLTASPDGTLIASA 214 (319)
T ss_dssp TSCEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTT--EEEEEECCCCSCEEEEEECTTSSEEEEE
T ss_pred CCCeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcc--hhheeecCCCCcEEEEEEcCCCCEEEEE
Confidence 887777777778899999999854 48999999999999999987 7788889999999999999999999999
Q ss_pred eCCccEEEEEccCccccceeeehhhhccccccCCCCCeEEEecCCCCCCeEEEEEcCCEEEEEecccceEEEEec-----
Q psy710 271 TEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKLLLAYETGLVVHWDLKLKRAEFRWQ----- 345 (591)
Q Consensus 271 ~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~----- 345 (591)
+.||.|++||+.+.+.. ..+. +...|.+++|+| ++.+|++++.+ .+++|++..+.....+.
T Consensus 215 ~~dg~i~iwd~~~~~~~-----------~~~~-~~~~v~~~~~sp-~~~~la~~~~~-~i~v~~~~~~~~~~~~~~~~~~ 280 (319)
T 3frx_A 215 GKDGEIMLWNLAAKKAM-----------YTLS-AQDEVFSLAFSP-NRYWLAAATAT-GIKVFSLDPQYLVDDLRPEFAG 280 (319)
T ss_dssp ETTCEEEEEETTTTEEE-----------EEEE-CCSCEEEEEECS-SSSEEEEEETT-EEEEEEETTEEEEEEECCCCTT
T ss_pred eCCCeEEEEECCCCcEE-----------EEec-CCCcEEEEEEcC-CCCEEEEEcCC-CcEEEEeCcCeeeeccCccccc
Confidence 99999999999987653 1333 346899999999 99999888765 59999999887766553
Q ss_pred ----cCCCeeEEEEeecCCEEEEEecCCcEEEEecC
Q psy710 346 ----CSEPIKSVCWHYEGKQFLCSHTDGTISTWAVR 377 (591)
Q Consensus 346 ----~~~~v~~~~~sp~g~~l~s~~~dg~i~vwd~~ 377 (591)
+...+.+++|+|||++|++++.||.|++||+.
T Consensus 281 ~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd~~ 316 (319)
T 3frx_A 281 YSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQVM 316 (319)
T ss_dssp CCGGGCCCEEEEEECTTSSEEEEEETTSCEEEEEEE
T ss_pred cccCcCcceeEEEECCCCCEEEEeecCceEEEEEEe
Confidence 45679999999999999999999999999997
No 23
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.6e-44 Score=357.40 Aligned_cols=337 Identities=15% Similarity=0.153 Sum_probs=279.3
Q ss_pred cCCCCCCcEEEeCCCCc-EEEEEeCCCcEEEEcC----C-Cc------eeEeecc----------CCcceEEEEEeecCC
Q psy710 4 HGFPYQPTAIAFDPIQK-LLAIGTKTGSLRLLGR----P-GV------DAHVRHE----------TDAAVIQMQFLTNEG 61 (591)
Q Consensus 4 ~gh~~~v~~~~~spdg~-~la~g~~dg~i~lw~~----~-~~------~~~~~~~----------h~~~v~~l~~sp~~~ 61 (591)
+.|.+.|++++|+|+|+ +||+|+.||.|++|++ . +. ....+.. |.+.|.+++|+|+++
T Consensus 42 ~~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 121 (425)
T 1r5m_A 42 IVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGN 121 (425)
T ss_dssp EEECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSS
T ss_pred eeccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCC
Confidence 45779999999999999 9999999999999999 6 33 2334433 688999999999999
Q ss_pred EEEEecCCCeEEEEeecccCceeeeEEEeeccceEEEEeeCCceEEEEEeCCCcEEEEEeeeeeeeceecccccccccCC
Q psy710 62 ALITATADDSLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCM 141 (591)
Q Consensus 62 ~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~ 141 (591)
+|++++.|+.|++|| .++ ..+..+..|...|.+++|+|++++|++++.|+.|++||+.+++....+..........
T Consensus 122 ~l~~~~~dg~i~i~~-~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~- 197 (425)
T 1r5m_A 122 SIVTGVENGELRLWN-KTG--ALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSI- 197 (425)
T ss_dssp EEEEEETTSCEEEEE-TTS--CEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC--------
T ss_pred EEEEEeCCCeEEEEe-CCC--CeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccce-
Confidence 999999999999999 333 4678888999999999999999999999999999999999888776665332211000
Q ss_pred CCCCCceeccCCCCcCcceeeeccCCCCceEEEECCCCCEEEEEeCCCcEEEeCCCCeEEE-EeccCCCcEEEEEEEcCC
Q psy710 142 KTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGVDAH-VRHETDAAVIQMQFLTNE 220 (591)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~v~~~~~~~~~ 220 (591)
......+....+.+++|+|++ .+++++.+|.|++||+...+.. ....+...|.+++|+|++
T Consensus 198 -----------------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~ 259 (425)
T 1r5m_A 198 -----------------NAENHSGDGSLGVDVEWVDDD-KFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTN 259 (425)
T ss_dssp -------------------------CCCBSCCEEEETT-EEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTT
T ss_pred -----------------eeccccCCcceeeEEEEcCCC-EEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCC
Confidence 000001122337889999885 5888999999999999876544 333456799999999999
Q ss_pred ceEEEEeCCCcEEEEEccCCCcceEEeeeeccccEEEEEecCCCCEEEEEeCCccEEEEEccCccccceeeehhhhcccc
Q psy710 221 GALITATADDSLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVC 300 (591)
Q Consensus 221 ~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~ 300 (591)
++|++++.|+.|++||+++. +.+..+..|...|.+++|+|++ ++++++.|+.|++||+.+++.. ..
T Consensus 260 ~~l~~~~~d~~i~i~d~~~~--~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~-----------~~ 325 (425)
T 1r5m_A 260 KLLLSASDDGTLRIWHGGNG--NSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLL-----------AL 325 (425)
T ss_dssp TEEEEEETTSCEEEECSSSB--SCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEE-----------EE
T ss_pred CEEEEEcCCCEEEEEECCCC--ccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEe-----------Ee
Confidence 99999999999999999987 6677788888999999999999 9999999999999999987663 35
Q ss_pred ccCCCCCeEEEecCCCCCCeEEEEEcCCEEEEEecccce--------------------EEEEec-cCC--CeeEEEEee
Q psy710 301 MKTHPGPIIHLSDNPLDPSKLLLAYETGLVVHWDLKLKR--------------------AEFRWQ-CSE--PIKSVCWHY 357 (591)
Q Consensus 301 ~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~iwd~~~~~--------------------~~~~~~-~~~--~v~~~~~sp 357 (591)
+..|...|.+++|+| ++++|++++.||.|++||+.+++ .+..+. |.. .|.+++|+|
T Consensus 326 ~~~~~~~i~~~~~s~-~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~ 404 (425)
T 1r5m_A 326 SIVDGVPIFAGRISQ-DGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNC 404 (425)
T ss_dssp EECTTCCEEEEEECT-TSSEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECT
T ss_pred cccCCccEEEEEEcC-CCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccC
Confidence 667889999999999 99999999999999999999887 666666 544 999999999
Q ss_pred cCCEEEEEecCCcEEEEecC
Q psy710 358 EGKQFLCSHTDGTISTWAVR 377 (591)
Q Consensus 358 ~g~~l~s~~~dg~i~vwd~~ 377 (591)
++++|++++.||.|++||++
T Consensus 405 ~~~~l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 405 AGNKISVAYSLQEGSVVAIP 424 (425)
T ss_dssp TSSEEEEEESSSCCEEEECC
T ss_pred CCceEEEEecCceEEEEeec
Confidence 99999999999999999986
No 24
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=1e-43 Score=341.95 Aligned_cols=287 Identities=13% Similarity=0.100 Sum_probs=236.8
Q ss_pred cCCCCCCcEEEeCCCCcEEEEEeCCCcEEEEcCC------------CceeEeeccCCcceEEEEEeecCCEEEEecCCCe
Q psy710 4 HGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRP------------GVDAHVRHETDAAVIQMQFLTNEGALITATADDS 71 (591)
Q Consensus 4 ~gh~~~v~~~~~spdg~~la~g~~dg~i~lw~~~------------~~~~~~~~~h~~~v~~l~~sp~~~~l~s~~~d~~ 71 (591)
..|...|.+++|+|||++|++++ |+++++||.. .........|...|.+++|+|++ .|++++.||+
T Consensus 27 ~~~~~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~-~l~~~s~dg~ 104 (344)
T 4gqb_B 27 ACMERQLEAARYRSDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGER-GILVASDSGA 104 (344)
T ss_dssp SSCCSEEEEEEECTTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTT-EEEEEETTSE
T ss_pred ccccCCEEEEEECCCCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCC-eEEEEECCCE
Confidence 35778899999999999999887 6778888632 11122334567789999999984 7889999999
Q ss_pred EEEEeecccCceee--eEEEeeccceEEEEeeCCceEEEEEeCCCcEEEEEeeeeeeeceecccccccccCCCCCCCcee
Q psy710 72 LHLWNFRQKRPEIV--HSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPII 149 (591)
Q Consensus 72 i~vw~~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (591)
|+|||+++++.... ..+.+|.+.|++++|+|++++|++|+.|+.|++||+.+++++..+.
T Consensus 105 v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~------------------ 166 (344)
T 4gqb_B 105 VELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYR------------------ 166 (344)
T ss_dssp EEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC------------------
T ss_pred EEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEc------------------
Confidence 99999998763322 3455899999999999999999999999999999999988776654
Q ss_pred ccCCCCcCcceeeeccCCCCceEEEECCCC-CEEEEEeCCCcEEEeCCCCeEEEEec---cCCCcEEEEEEEcC-CceEE
Q psy710 150 HLSDNPLDPSKTFRHGFPYQPTAIAFDPIQ-KLLAIGTKTGSLRLLGRPGVDAHVRH---ETDAAVIQMQFLTN-EGALI 224 (591)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~---~~~~~v~~~~~~~~-~~~l~ 224 (591)
+|...|.+++|+|++ .++++++.|+.|++||+.+.+..... .+...+.+++|+|+ +++|+
T Consensus 167 ---------------~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~ 231 (344)
T 4gqb_B 167 ---------------AHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFV 231 (344)
T ss_dssp ---------------CCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEE
T ss_pred ---------------CcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceE
Confidence 677889999999987 57899999999999999877655432 23457999999995 56788
Q ss_pred EEeCCCcEEEEEccCCCcceEEeeeeccccEEEEEecCCC-CEEEEEeCCccEEEEEccCccccceeeehhhhccccccC
Q psy710 225 TATADDSLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQS-KWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKT 303 (591)
Q Consensus 225 ~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~sp~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~ 303 (591)
+++.|+.|++||++++ +++..+.+|...|++++|+|++ ++|++|+.|++|++||+.++++. .+.+
T Consensus 232 sg~~dg~v~~wd~~~~--~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~------------~~~~ 297 (344)
T 4gqb_B 232 FGDENGTVSLVDTKST--SCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELF------------RSQA 297 (344)
T ss_dssp EEETTSEEEEEESCC----CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEE------------EECC
T ss_pred EeccCCcEEEEECCCC--cEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEE------------EEcC
Confidence 9999999999999988 7788999999999999999998 57999999999999999987653 4678
Q ss_pred CCCCeEEEecCCCCCC-eEEEEEcCCEEEEEecccceE
Q psy710 304 HPGPIIHLSDNPLDPS-KLLLAYETGLVVHWDLKLKRA 340 (591)
Q Consensus 304 ~~~~v~~~~~sp~~~~-~l~~~~~dg~i~iwd~~~~~~ 340 (591)
|.+.|++++|+| +++ +|++++.|++|++|++.+..+
T Consensus 298 H~~~V~~v~~sp-~~~~llas~s~D~~v~~w~v~~~~~ 334 (344)
T 4gqb_B 298 HRDFVRDATWSP-LNHSLLTTVGWDHQVVHHVVPTEPL 334 (344)
T ss_dssp CSSCEEEEEECS-SSTTEEEEEETTSCEEEEECCC---
T ss_pred CCCCEEEEEEeC-CCCeEEEEEcCCCeEEEEECCCCCC
Confidence 999999999999 776 567899999999999987544
No 25
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=5.8e-43 Score=332.37 Aligned_cols=289 Identities=14% Similarity=0.221 Sum_probs=251.2
Q ss_pred eeEeeccCCcceEEEEEeecCCEEEEecCCCeEEEEeecccCceeeeEEEeeccceEEEEeeCCceEEEEEeCCCcEEEE
Q psy710 40 DAHVRHETDAAVIQMQFLTNEGALITATADDSLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVV 119 (591)
Q Consensus 40 ~~~~~~~h~~~v~~l~~sp~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw 119 (591)
..+.+.+|.+.|.+++|+|++++|++++.|++|++||+.++ ..+..+..|...|.+++|+|++++|++|+.|+.|++|
T Consensus 5 ~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vw 82 (304)
T 2ynn_A 5 IKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQ--VEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVF 82 (304)
T ss_dssp CEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTT--EEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEE
T ss_pred eEEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCC--ceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEE
Confidence 45678899999999999999999999999999999999987 4788899999999999999999999999999999999
Q ss_pred EeeeeeeeceecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCCCCEEEEEeCCCcEEEeCCCCe
Q psy710 120 NIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGV 199 (591)
Q Consensus 120 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~ 199 (591)
|+.+++....+. +|...|.+++|+|++++|++|+.|+.|++||+.+.
T Consensus 83 d~~~~~~~~~~~---------------------------------~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~ 129 (304)
T 2ynn_A 83 NYNTGEKVVDFE---------------------------------AHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENN 129 (304)
T ss_dssp ETTTCCEEEEEE---------------------------------CCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGT
T ss_pred ECCCCcEEEEEe---------------------------------CCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCC
Confidence 999877665554 57788999999999999999999999999998765
Q ss_pred -EE-EEeccCCCcEEEEEEEc-CCceEEEEeCCCcEEEEEccCCCcceEEeeeeccccEEEEEecC--CCCEEEEEeCCc
Q psy710 200 -DA-HVRHETDAAVIQMQFLT-NEGALITATADDSLHLWNFRQKRPEIVHSLKFQRERITYIHLPL--QSKWLYVGTEKG 274 (591)
Q Consensus 200 -~~-~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~sp--~~~~l~~~~~dg 274 (591)
.. .....|...|.+++|+| ++..|++++.|+.|++||++.... .......+...+..+.|+| ++++|++|+.|+
T Consensus 130 ~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~ 208 (304)
T 2ynn_A 130 WALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTP-NFTLTTGQERGVNYVDYYPLPDKPYMITASDDL 208 (304)
T ss_dssp TEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSC-SEEEECCCTTCEEEEEECCSTTCCEEEEEETTS
T ss_pred cchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCc-cceeccCCcCcEEEEEEEEcCCCCEEEEEcCCC
Confidence 33 23445677999999999 678999999999999999987632 2223345567899999876 778999999999
Q ss_pred cEEEEEccCccccceeeehhhhccccccCCCCCeEEEecCCCCCCeEEEEEcCCEEEEEecccceEEEEec-cCCCeeEE
Q psy710 275 NIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKLLLAYETGLVVHWDLKLKRAEFRWQ-CSEPIKSV 353 (591)
Q Consensus 275 ~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~ 353 (591)
.|++||+++++. ...+.+|...|.+++|+| ++++|++++.||.|++||+.++++...+. |...+.++
T Consensus 209 ~i~iWd~~~~~~-----------~~~~~~h~~~v~~~~~~p-~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~ 276 (304)
T 2ynn_A 209 TIKIWDYQTKSC-----------VATLEGHMSNVSFAVFHP-TLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCI 276 (304)
T ss_dssp EEEEEETTTTEE-----------EEEEECCSSCEEEEEECS-SSSEEEEEETTSCEEEEETTTCCEEEEECCSSSSEEEE
T ss_pred eEEEEeCCCCcc-----------ceeeCCCCCCEEEEEECC-CCCEEEEEcCCCeEEEEECCCCceeeeccCCCccEEEE
Confidence 999999998776 336789999999999999 99999999999999999999999988876 77899999
Q ss_pred EEeecCC--EEEEEecCCcEEEEecC
Q psy710 354 CWHYEGK--QFLCSHTDGTISTWAVR 377 (591)
Q Consensus 354 ~~sp~g~--~l~s~~~dg~i~vwd~~ 377 (591)
+|+|++. ++++++.|| +.+|++.
T Consensus 277 ~~~~~~~~~~~asg~~~g-~~~~~~~ 301 (304)
T 2ynn_A 277 ATHPTGRKNYIASGFDNG-FTVLSLG 301 (304)
T ss_dssp EECTTCGGGCEEEEETTE-EEEEECC
T ss_pred EECCCCCceEEEEecCCc-eEEEEec
Confidence 9999885 577776655 7788876
No 26
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=8.9e-44 Score=345.46 Aligned_cols=287 Identities=14% Similarity=0.185 Sum_probs=236.0
Q ss_pred cCCCCCCcEEEeCCCCcEEEEEeC------CCcEEEEcCC-Cc----eeEeeccCCcceEEEEEeecCCEEEEecCCCeE
Q psy710 4 HGFPYQPTAIAFDPIQKLLAIGTK------TGSLRLLGRP-GV----DAHVRHETDAAVIQMQFLTNEGALITATADDSL 72 (591)
Q Consensus 4 ~gh~~~v~~~~~spdg~~la~g~~------dg~i~lw~~~-~~----~~~~~~~h~~~v~~l~~sp~~~~l~s~~~d~~i 72 (591)
.+|...|++++|||||++||+|+. |+.|++|+.. +. ......+|...|.+++|+|+++ +++++.|++|
T Consensus 39 ~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~-~l~~s~dg~v 117 (357)
T 4g56_B 39 ACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKG-ILVASDSGAV 117 (357)
T ss_dssp -CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTE-EEEEETTSCE
T ss_pred ccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCC-EEEEECCCEE
Confidence 469999999999999999999997 7789999865 22 2334567899999999999975 5567789999
Q ss_pred EEEeecccCceee--eEEEeeccceEEEEeeCCceEEEEEeCCCcEEEEEeeeeeeeceecccccccccCCCCCCCceec
Q psy710 73 HLWNFRQKRPEIV--HSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIH 150 (591)
Q Consensus 73 ~vw~~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (591)
++||+.+++.... ....+|...|.+++|+|++++|++++.|+.|++||+.+++.+..+.
T Consensus 118 ~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~------------------- 178 (357)
T 4g56_B 118 ELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYN------------------- 178 (357)
T ss_dssp EEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEEC-------------------
T ss_pred EEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEc-------------------
Confidence 9999988753322 2344788999999999999999999999999999999887766654
Q ss_pred cCCCCcCcceeeeccCCCCceEEEECCCCC-EEEEEeCCCcEEEeCCCCeEEEE---eccCCCcEEEEEEEcCC-ceEEE
Q psy710 151 LSDNPLDPSKTFRHGFPYQPTAIAFDPIQK-LLAIGTKTGSLRLLGRPGVDAHV---RHETDAAVIQMQFLTNE-GALIT 225 (591)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~---~~~~~~~v~~~~~~~~~-~~l~~ 225 (591)
+|...|.+++|+|++. ++++++.||.|++||+.+.+... ...+...+.+++|+|++ .+|++
T Consensus 179 --------------~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~ 244 (357)
T 4g56_B 179 --------------AHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFAC 244 (357)
T ss_dssp --------------CCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEE
T ss_pred --------------CCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEE
Confidence 5677889999999874 78999999999999998765543 23346689999999975 57889
Q ss_pred EeCCCcEEEEEccCCCcceEEeeeeccccEEEEEecCCC-CEEEEEeCCccEEEEEccCccccceeeehhhhccccccCC
Q psy710 226 ATADDSLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQS-KWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTH 304 (591)
Q Consensus 226 ~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~sp~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~ 304 (591)
++.|+.|++||++++ +.+..+.+|...|++++|+|++ ++|++|+.|++|++||+++++.. ...+|
T Consensus 245 g~~d~~i~~wd~~~~--~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~------------~~~~H 310 (357)
T 4g56_B 245 GDETGNVSLVNIKNP--DSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVF------------RDLSH 310 (357)
T ss_dssp EESSSCEEEEESSCG--GGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEE------------EECCC
T ss_pred eecccceeEEECCCC--cEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEe------------EECCC
Confidence 999999999999987 6788899999999999999987 57899999999999999987663 33579
Q ss_pred CCCeEEEecCCCCCCeEEEEEcCCEEEEEecccc
Q psy710 305 PGPIIHLSDNPLDPSKLLLAYETGLVVHWDLKLK 338 (591)
Q Consensus 305 ~~~v~~~~~sp~~~~~l~~~~~dg~i~iwd~~~~ 338 (591)
.+.|++++|+|.++.+|++++.|++|++|++...
T Consensus 311 ~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~ 344 (357)
T 4g56_B 311 RDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSE 344 (357)
T ss_dssp SSCEEEEEECSSSTTEEEEEETTSCEEEEECC--
T ss_pred CCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCC
Confidence 9999999999867889999999999999999763
No 27
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=5.6e-43 Score=339.63 Aligned_cols=284 Identities=11% Similarity=0.133 Sum_probs=250.2
Q ss_pred cCCCCCCcEEEeCCCCcEEEEEeCCCcEEEEcCC-CceeEeeccCCcceEEEEEeecCCEEEEecCCCeEEEEeecccC-
Q psy710 4 HGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRP-GVDAHVRHETDAAVIQMQFLTNEGALITATADDSLHLWNFRQKR- 81 (591)
Q Consensus 4 ~gh~~~v~~~~~spdg~~la~g~~dg~i~lw~~~-~~~~~~~~~h~~~v~~l~~sp~~~~l~s~~~d~~i~vw~~~~~~- 81 (591)
.||.+.|++++|+|++++||+|+.||+|++||.. +.....+..|...|.+++|+|++++|++++.|+.+++|++....
T Consensus 61 ~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~ 140 (354)
T 2pbi_B 61 KGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKN 140 (354)
T ss_dssp ECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCTT
T ss_pred cCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEecccc
Confidence 5899999999999999999999999999999976 66777888899999999999999999999999999999986432
Q ss_pred ---ceeeeEEEeeccceEEEEeeCCceEEEEEeCCCcEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCc
Q psy710 82 ---PEIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDP 158 (591)
Q Consensus 82 ---~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (591)
......+..|...|.+++|+|+++.|++++.|++|++||+++++....+.
T Consensus 141 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~--------------------------- 193 (354)
T 2pbi_B 141 ENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFH--------------------------- 193 (354)
T ss_dssp CCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEE---------------------------
T ss_pred ccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEc---------------------------
Confidence 13456778899999999999999999999999999999999887666554
Q ss_pred ceeeeccCCCCceEEEECC--CCCEEEEEeCCCcEEEeCCCCeEEEEe-ccCCCcEEEEEEEcCCceEEEEeCCCcEEEE
Q psy710 159 SKTFRHGFPYQPTAIAFDP--IQKLLAIGTKTGSLRLLGRPGVDAHVR-HETDAAVIQMQFLTNEGALITATADDSLHLW 235 (591)
Q Consensus 159 ~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~w 235 (591)
+|...|.+++|+| ++++|++|+.||.|++||+.+.++... ..+...|.+++|+|++++|++++.|++|++|
T Consensus 194 ------~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lw 267 (354)
T 2pbi_B 194 ------GHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLY 267 (354)
T ss_dssp ------CCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred ------CCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEE
Confidence 5677789999987 568999999999999999988776543 4457799999999999999999999999999
Q ss_pred EccCCCcceEEeeeec--cccEEEEEecCCCCEEEEEeCCccEEEEEccCccccceeeehhhhccccccCCCCCeEEEec
Q psy710 236 NFRQKRPEIVHSLKFQ--RERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSD 313 (591)
Q Consensus 236 d~~~~~~~~~~~~~~~--~~~v~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 313 (591)
|++.. ..+..+..+ ...+.+++|+|++++|++|+.|+.|++||+.+++. ...+.+|...|.+++|
T Consensus 268 d~~~~--~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~-----------~~~l~~h~~~v~~l~~ 334 (354)
T 2pbi_B 268 DLRAD--REVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSR-----------VSILFGHENRVSTLRV 334 (354)
T ss_dssp ETTTT--EEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSE-----------EEEECCCSSCEEEEEE
T ss_pred ECCCC--cEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCce-----------EEEEECCCCcEEEEEE
Confidence 99987 455555433 34689999999999999999999999999988765 2366789999999999
Q ss_pred CCCCCCeEEEEEcCCEEEEEe
Q psy710 314 NPLDPSKLLLAYETGLVVHWD 334 (591)
Q Consensus 314 sp~~~~~l~~~~~dg~i~iwd 334 (591)
+| ++++|++++.|+.|++|+
T Consensus 335 sp-dg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 335 SP-DGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp CT-TSSCEEEEETTSEEEEEC
T ss_pred CC-CCCEEEEEcCCCCEEecC
Confidence 99 999999999999999996
No 28
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=9.3e-43 Score=338.08 Aligned_cols=296 Identities=10% Similarity=0.124 Sum_probs=253.8
Q ss_pred ceeEeeccCCcceEEEEEeecCCEEEEecCCCeEEEEeecccCceeeeEEEeeccceEEEEeeCCceEEEEEeCCCcEEE
Q psy710 39 VDAHVRHETDAAVIQMQFLTNEGALITATADDSLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHV 118 (591)
Q Consensus 39 ~~~~~~~~h~~~v~~l~~sp~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v 118 (591)
.....+.+|.+.|++++|+|++++|++++.|++|++||..+++ ....+..|...|.+++|+|+++.+++++.|+.+++
T Consensus 55 ~~~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~--~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v 132 (354)
T 2pbi_B 55 KTRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTN--KEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSV 132 (354)
T ss_dssp CEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC--EEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEE
T ss_pred EEEEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCC--cceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEE
Confidence 4566789999999999999999999999999999999998874 56778888899999999999999999999999999
Q ss_pred EEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCCCCEEEEEeCCCcEEEeCCCC
Q psy710 119 VNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPG 198 (591)
Q Consensus 119 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~ 198 (591)
|++....... .......+ .+|...|.+++|+|+++.|++++.|+.|++||+.+
T Consensus 133 ~~~~~~~~~~--------------------------~~~~~~~~-~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~ 185 (354)
T 2pbi_B 133 YPLTFDKNEN--------------------------MAAKKKSV-AMHTNYLSACSFTNSDMQILTASGDGTCALWDVES 185 (354)
T ss_dssp EECCCCTTCC--------------------------SGGGCEEE-EECSSCEEEEEECSSSSEEEEEETTSEEEEEETTT
T ss_pred EEEecccccc--------------------------ccccceee-eccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCC
Confidence 9986522100 00111112 36888899999999999999999999999999988
Q ss_pred eEEEE-eccCCCcEEEEEEEc--CCceEEEEeCCCcEEEEEccCCCcceEEeeeeccccEEEEEecCCCCEEEEEeCCcc
Q psy710 199 VDAHV-RHETDAAVIQMQFLT--NEGALITATADDSLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEKGN 275 (591)
Q Consensus 199 ~~~~~-~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~ 275 (591)
.+... ...|...|.+++|+| ++++|++++.|+.|++||++++ +++..+..|...|.+++|+|++++|++++.|++
T Consensus 186 ~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~--~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~ 263 (354)
T 2pbi_B 186 GQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSG--QCVQAFETHESDVNSVRYYPSGDAFASGSDDAT 263 (354)
T ss_dssp CCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTC--CEEEEECCCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred CeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCC--cEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCe
Confidence 77654 345677999999987 4689999999999999999988 788899999999999999999999999999999
Q ss_pred EEEEEccCccccceeeehhhhccccccCCCCCeEEEecCCCCCCeEEEEEcCCEEEEEecccceEEEEec-cCCCeeEEE
Q psy710 276 IHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKLLLAYETGLVVHWDLKLKRAEFRWQ-CSEPIKSVC 354 (591)
Q Consensus 276 i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~ 354 (591)
|++||++..+... ......+...+.+++|+| ++++|++++.|+.|++||+.+++.+..+. |...|++++
T Consensus 264 v~lwd~~~~~~~~---------~~~~~~~~~~~~~~~~s~-~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~ 333 (354)
T 2pbi_B 264 CRLYDLRADREVA---------IYSKESIIFGASSVDFSL-SGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLR 333 (354)
T ss_dssp EEEEETTTTEEEE---------EECCTTCCSCEEEEEECT-TSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEE
T ss_pred EEEEECCCCcEEE---------EEcCCCcccceeEEEEeC-CCCEEEEEECCCcEEEEECCCCceEEEEECCCCcEEEEE
Confidence 9999998765421 112223445789999999 99999999999999999999888776654 999999999
Q ss_pred EeecCCEEEEEecCCcEEEEe
Q psy710 355 WHYEGKQFLCSHTDGTISTWA 375 (591)
Q Consensus 355 ~sp~g~~l~s~~~dg~i~vwd 375 (591)
|+|+|++|++++.||+|++|+
T Consensus 334 ~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 334 VSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp ECTTSSCEEEEETTSEEEEEC
T ss_pred ECCCCCEEEEEcCCCCEEecC
Confidence 999999999999999999996
No 29
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=1.2e-43 Score=348.22 Aligned_cols=313 Identities=13% Similarity=0.178 Sum_probs=259.1
Q ss_pred EEEEcCC-CceeEeeccCCcceEEEEEeecCCEEEEecCCCeEEEEeecccCceeeeEEEeeccceEEEEeeCCceEEEE
Q psy710 31 LRLLGRP-GVDAHVRHETDAAVIQMQFLTNEGALITATADDSLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYV 109 (591)
Q Consensus 31 i~lw~~~-~~~~~~~~~h~~~v~~l~~sp~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 109 (591)
+..|+.. ......+.+|.+.|++++|+|++++|++|+.|++|++||+.++ +....+..|...|.+++|+|++++|++
T Consensus 48 ~~~~~~~~~~~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~--~~~~~~~~h~~~v~~~~~s~~g~~las 125 (380)
T 3iz6_a 48 AVSFNPTDLVCCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTS--QKTHAIKLHCPWVMECAFAPNGQSVAC 125 (380)
T ss_dssp CCCCCCCCCEEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTT--EEEEEEECCCTTCCCCEECTTSSEEEE
T ss_pred ccccccceeEEeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCC--ccceEEecCCCCEEEEEECCCCCEEEE
Confidence 4456544 4556789999999999999999999999999999999999887 478889999999999999999999999
Q ss_pred EeCCCcEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCC-CCEEEEEeCC
Q psy710 110 GTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPI-QKLLAIGTKT 188 (591)
Q Consensus 110 ~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d 188 (591)
++.|+.+++|++.+..... ........ ..+|...+.+++|.|+ +..|++|+.|
T Consensus 126 ~~~d~~v~iw~~~~~~~~~-------------------------~~~~~~~~-~~gh~~~v~~~~~~~~~~~~l~s~s~D 179 (380)
T 3iz6_a 126 GGLDSACSIFNLSSQADRD-------------------------GNMPVSRV-LTGHKGYASSCQYVPDQETRLITGSGD 179 (380)
T ss_dssp CCSSSCCEEEECCCCSSCC-------------------------CSSTTCCB-CCCCSSCCCCCBCCSSSSSCEEEECTT
T ss_pred eeCCCcEEEEECCCCcccc-------------------------CCccceee-ccCCCcceEEEEEecCCCCEEEEECCC
Confidence 9999999999987632100 00011111 2478888999999996 4579999999
Q ss_pred CcEEEeCCCCeEEEEe------ccCCCcEEEEEEEc-CCceEEEEeCCCcEEEEEccCCCcceEEeeeeccccEEEEEec
Q psy710 189 GSLRLLGRPGVDAHVR------HETDAAVIQMQFLT-NEGALITATADDSLHLWNFRQKRPEIVHSLKFQRERITYIHLP 261 (591)
Q Consensus 189 g~i~i~d~~~~~~~~~------~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~s 261 (591)
+.|++||+.+.+.... ..+...|.++.|++ ++++|++++.|+.|++||++... ..+..+.+|...|.+++|+
T Consensus 180 ~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~-~~~~~~~~h~~~v~~v~~~ 258 (380)
T 3iz6_a 180 QTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITS-RAVRTYHGHEGDINSVKFF 258 (380)
T ss_dssp SCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTC-CCCEEECCCSSCCCEEEEC
T ss_pred CcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCC-cceEEECCcCCCeEEEEEe
Confidence 9999999988776643 23567899999987 78899999999999999998432 5677888999999999999
Q ss_pred CCCCEEEEEeCCccEEEEEccCccccceeeehhhhccccccCCCCCeEEEecCCCCCCeEEEEEcCCEEEEEecccceEE
Q psy710 262 LQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKLLLAYETGLVVHWDLKLKRAE 341 (591)
Q Consensus 262 p~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~iwd~~~~~~~ 341 (591)
|++++|++|+.|++|++||+++++........ ......+...|.+++|+| ++++|++|+.||.|++||+..++..
T Consensus 259 p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~----~~~~~~~~~~v~~~~~s~-~g~~l~~g~~dg~i~vwd~~~~~~~ 333 (380)
T 3iz6_a 259 PDGQRFGTGSDDGTCRLFDMRTGHQLQVYNRE----PDRNDNELPIVTSVAFSI-SGRLLFAGYSNGDCYVWDTLLAEMV 333 (380)
T ss_dssp TTSSEEEEECSSSCEEEEETTTTEEEEEECCC----CSSSCCSSCSCSEEEECS-SSSEEEEECTTSCEEEEETTTCCEE
T ss_pred cCCCeEEEEcCCCeEEEEECCCCcEEEEeccc----ccccccccCceEEEEECC-CCCEEEEEECCCCEEEEECCCCceE
Confidence 99999999999999999999987653210000 001122334589999999 9999999999999999999998887
Q ss_pred EEe-----ccCCCeeEEEEeecCCEEEEEecCCcEEEEecC
Q psy710 342 FRW-----QCSEPIKSVCWHYEGKQFLCSHTDGTISTWAVR 377 (591)
Q Consensus 342 ~~~-----~~~~~v~~~~~sp~g~~l~s~~~dg~i~vwd~~ 377 (591)
..+ .|...|++++|+|+|++|++|+.||+|++|++.
T Consensus 334 ~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~ 374 (380)
T 3iz6_a 334 LNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFS 374 (380)
T ss_dssp EEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECC
T ss_pred EEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecC
Confidence 665 388999999999999999999999999999998
No 30
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=5.6e-43 Score=336.82 Aligned_cols=299 Identities=11% Similarity=0.073 Sum_probs=237.5
Q ss_pred EEEEcCCCceeEeeccCCcceEEEEEeecCCEEEEecCCCeEEEEeeccc-------C--ceeeeEEEeeccceEEEEee
Q psy710 31 LRLLGRPGVDAHVRHETDAAVIQMQFLTNEGALITATADDSLHLWNFRQK-------R--PEIVHSLKFQRERITYIHLP 101 (591)
Q Consensus 31 i~lw~~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~~~d~~i~vw~~~~~-------~--~~~~~~~~~~~~~v~~~~~~ 101 (591)
.+.|+++... ...|...|.+++|+|||++|++++ |+++++||.... . .........+...|.+++|+
T Consensus 16 ~r~w~~~~~~---~~~~~~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s 91 (344)
T 4gqb_B 16 AREWNLPPNA---PACMERQLEAARYRSDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWV 91 (344)
T ss_dssp -------CCS---CSSCCSEEEEEEECTTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEE
T ss_pred ccccCCCCCC---cccccCCEEEEEECCCCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEe
Confidence 4567765322 235677899999999999999887 678888874311 0 01122334466789999999
Q ss_pred CCceEEEEEeCCCcEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCCCCE
Q psy710 102 LQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKL 181 (591)
Q Consensus 102 ~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 181 (591)
|++ .|++++.||.|++||+.+++...... ....+|...|++++|+|++++
T Consensus 92 ~d~-~l~~~s~dg~v~lWd~~~~~~~~~~~-----------------------------~~~~~H~~~V~~v~~spdg~~ 141 (344)
T 4gqb_B 92 GER-GILVASDSGAVELWELDENETLIVSK-----------------------------FCKYEHDDIVSTVSVLSSGTQ 141 (344)
T ss_dssp TTT-EEEEEETTSEEEEEEECTTSSCEEEE-----------------------------EEEECCSSCEEEEEECTTSSE
T ss_pred CCC-eEEEEECCCEEEEEeccCCCceeEee-----------------------------ccccCCCCCEEEEEECCCCCE
Confidence 986 57799999999999998865433221 112478899999999999999
Q ss_pred EEEEeCCCcEEEeCCCCeEEEEe-ccCCCcEEEEEEEcCCc-eEEEEeCCCcEEEEEccCCCcceEEee--eeccccEEE
Q psy710 182 LAIGTKTGSLRLLGRPGVDAHVR-HETDAAVIQMQFLTNEG-ALITATADDSLHLWNFRQKRPEIVHSL--KFQRERITY 257 (591)
Q Consensus 182 l~~~~~dg~i~i~d~~~~~~~~~-~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~~wd~~~~~~~~~~~~--~~~~~~v~~ 257 (591)
|++|+.|+.|++||+.+++.... ..|...|.+++|+|++. .|++++.|++|++||++++ +....+ ..+...+.+
T Consensus 142 l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~--~~~~~~~~~~~~~~~~~ 219 (344)
T 4gqb_B 142 AVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCP--KPASQIGCSAPGYLPTS 219 (344)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSS--SCEEECC----CCCEEE
T ss_pred EEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCceeeecccccccccccccc--ceeeeeecceeecccee
Confidence 99999999999999998877654 44678999999999885 6889999999999999988 455554 345567999
Q ss_pred EEecCC-CCEEEEEeCCccEEEEEccCccccceeeehhhhccccccCCCCCeEEEecCCCCC-CeEEEEEcCCEEEEEec
Q psy710 258 IHLPLQ-SKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDP-SKLLLAYETGLVVHWDL 335 (591)
Q Consensus 258 ~~~sp~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~-~~l~~~~~dg~i~iwd~ 335 (591)
++|+|+ ++++++|+.||.|++||+++++. ...+.+|...|++++|+| ++ ++|++++.|++|+|||+
T Consensus 220 ~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~-----------~~~~~~h~~~v~~v~fsp-~g~~~lasgs~D~~i~vwd~ 287 (344)
T 4gqb_B 220 LAWHPQQSEVFVFGDENGTVSLVDTKSTSC-----------VLSSAVHSQCVTGLVFSP-HSVPFLASLSEDCSLAVLDS 287 (344)
T ss_dssp EEECSSCTTEEEEEETTSEEEEEESCC--C-----------CEEEECCSSCEEEEEECS-SSSCCEEEEETTSCEEEECT
T ss_pred eeecCCCCcceEEeccCCcEEEEECCCCcE-----------EEEEcCCCCCEEEEEEcc-CCCeEEEEEeCCCeEEEEEC
Confidence 999995 56889999999999999998876 346789999999999999 87 57999999999999999
Q ss_pred ccceEEEEeccCCCeeEEEEeecCC-EEEEEecCCcEEEEecC
Q psy710 336 KLKRAEFRWQCSEPIKSVCWHYEGK-QFLCSHTDGTISTWAVR 377 (591)
Q Consensus 336 ~~~~~~~~~~~~~~v~~~~~sp~g~-~l~s~~~dg~i~vwd~~ 377 (591)
.++++.....|...|++++|+|+++ +|++++.||+|++|++.
T Consensus 288 ~~~~~~~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~ 330 (344)
T 4gqb_B 288 SLSELFRSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVP 330 (344)
T ss_dssp TCCEEEEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC
T ss_pred CCCcEEEEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECC
Confidence 9999988888999999999999986 67799999999999998
No 31
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.4e-42 Score=373.10 Aligned_cols=462 Identities=14% Similarity=0.089 Sum_probs=318.9
Q ss_pred eeccCCcceEEEEEeecCCEEEEecCCCeEEEEeecccCceeeeEEEeeccceEEEEeeCCceEEEEEeCCCcEEEEEee
Q psy710 43 VRHETDAAVIQMQFLTNEGALITATADDSLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIE 122 (591)
Q Consensus 43 ~~~~h~~~v~~l~~sp~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~ 122 (591)
...+|...|++++|+|++++||+|+.|++|++|+....+ ....+ .|...|.+++|+| +++|++++.|+.|++||+.
T Consensus 12 ~~~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~--~~~~~-~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~ 87 (902)
T 2oaj_A 12 NKYGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVE--VVIKL-EDRSAIKEMRFVK-GIYLVVINAKDTVYVLSLY 87 (902)
T ss_dssp EEEECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCE--EEEEC-SSCCCEEEEEEET-TTEEEEEETTCEEEEEETT
T ss_pred cccCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcE--EEEEc-CCCCCEEEEEEcC-CCEEEEEECcCeEEEEECC
Confidence 345899999999999999999999999999999987653 33333 4778999999999 8899999999999999998
Q ss_pred eeeeeceecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCCCCEEEEEeCCCcEEEeCCCCeEEE
Q psy710 123 SFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGVDAH 202 (591)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~ 202 (591)
+++....+. +...|++++|+|+++++++|+.||.|++||+.+.+..
T Consensus 88 ~~~~~~~~~----------------------------------~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~ 133 (902)
T 2oaj_A 88 SQKVLTTVF----------------------------------VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLS 133 (902)
T ss_dssp TCSEEEEEE----------------------------------CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEE
T ss_pred CCcEEEEEc----------------------------------CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccc
Confidence 876554432 3467899999999999999999999999999887653
Q ss_pred E------------eccCCCcEEEEEEEcC-CceEEEEeCCCcEEEEEccCCCcceEEeeeec------------------
Q psy710 203 V------------RHETDAAVIQMQFLTN-EGALITATADDSLHLWNFRQKRPEIVHSLKFQ------------------ 251 (591)
Q Consensus 203 ~------------~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~------------------ 251 (591)
. ...+...|.+++|+|+ +..|++++.|+.| +||++++ +.+..+..|
T Consensus 134 ~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~h 210 (902)
T 2oaj_A 134 SFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVEN--EIKQSFIYELPPFAPGGDFSEKTNEKR 210 (902)
T ss_dssp EEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTT--EEEEEECCCBCTTCCCSTTCCCTTSCB
T ss_pred cceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCC--ceEEEEecccCCcCCCccccccccccc
Confidence 1 1234679999999996 4789999999999 9999987 667776654
Q ss_pred cccEEEEEecCCCCEEEEEeCCccEEEEEccCccccceeeehhhhccc----ccc---CCCCCeEEEecCCC---CC-Ce
Q psy710 252 RERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDV----CMK---THPGPIIHLSDNPL---DP-SK 320 (591)
Q Consensus 252 ~~~v~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~----~~~---~~~~~v~~~~~sp~---~~-~~ 320 (591)
...|.+++|+|+|++|++++.||.|++||+++++.............. ... .|...|.+++|++. ++ .+
T Consensus 211 ~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~l 290 (902)
T 2oaj_A 211 TPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSL 290 (902)
T ss_dssp CCCEEEEEECTTSSEEEEEETTCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEE
T ss_pred CCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEE
Confidence 467999999999999999999999999999887653110000000000 000 24567999999541 43 46
Q ss_pred EEEEEcC-----CEEEEEecc------------------cceEEEEe--ccCCCeeEEEEee----------cCCEEEEE
Q psy710 321 LLLAYET-----GLVVHWDLK------------------LKRAEFRW--QCSEPIKSVCWHY----------EGKQFLCS 365 (591)
Q Consensus 321 l~~~~~d-----g~i~iwd~~------------------~~~~~~~~--~~~~~v~~~~~sp----------~g~~l~s~ 365 (591)
|++|+.| ..+++|++. +.+....+ .+...|.++++.+ +...++++
T Consensus 291 l~sg~~~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~ 370 (902)
T 2oaj_A 291 LISHKSISRGDNQSLTMIDLGYTPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLI 370 (902)
T ss_dssp EEEEECSTTSSCCCEEEEEEEECCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEE
T ss_pred EEeCCCCCCCCCceEEEEecCCCCCccccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEE
Confidence 6777665 378899853 22333333 3678899998865 34478999
Q ss_pred ecCCcEEEEecCCCCCceee-------ecccccccCCCCCCCCCcceEEEEeecC-------------------------
Q psy710 366 HTDGTISTWAVRPLAKPVSV-------NQPHIKTNKDGKLEQCKPIQKVEWKHSR------------------------- 413 (591)
Q Consensus 366 ~~dg~i~vwd~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~i~~~~~~~~~------------------------- 413 (591)
+.||.|++||+. ++.+... +..| ..+|+++++++..
T Consensus 371 s~dg~l~~~~~~-~g~~~~~~~~~~~~l~~~-----------~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v 438 (902)
T 2oaj_A 371 LGNGEIETMLYP-SGIFTDKASLFPQNLSWL-----------RPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTK 438 (902)
T ss_dssp ETTSCEEEEETT-TCCEECCGGGSCGGGTTB-----------TTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCC
T ss_pred cCCCcEEEEECC-CCCcccccccCCCccccc-----------CCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCC
Confidence 999999999997 4543221 2223 3455555553210
Q ss_pred -----CCCcEEEEECCccCCCCCCCCeEEEEecceE-------EEE--------ecCcceeEEEEcCCCCCcCCCCCceE
Q psy710 414 -----SGEGFVIFSGGLTYDKAGRSPSISVMHNKTT-------TVL--------EMEHNVVDFVTLCESPYICEMQEPYA 473 (591)
Q Consensus 414 -----~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~-------~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~ 473 (591)
.+++.+|++|+.|. .+.++.-... ... .....|..+...|++ ..
T Consensus 439 ~sv~~spdg~~laSgs~Dg-------tVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg---------~~ 502 (902)
T 2oaj_A 439 RQKLPAEYGTAFITGHSNG-------SVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAET---------LE 502 (902)
T ss_dssp CCCCCCSEEEEEEEEETTS-------EEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTT---------TE
T ss_pred CcccccccCcEEEEecCCC-------cEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCC---------Ce
Confidence 12567888887654 4444432110 001 112345555555543 34
Q ss_pred EEEEecCC-eEEEecCCCCCC-------------------c---------------------ccCCceeeeecCCeeeee
Q psy710 474 IVVLLHND-LVVIDLLTPGFP-------------------C---------------------FENPYPMDIHESPVTCCV 512 (591)
Q Consensus 474 ~~~~~~~~-~~~~~~~~~~~~-------------------~---------------------~~~~~~~~~~~~~~~~~~ 512 (591)
+++...++ +++|++.+..+. . +.....+..|..+|++++
T Consensus 503 LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~sva 582 (902)
T 2oaj_A 503 LAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAIN 582 (902)
T ss_dssp EEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEE
T ss_pred EEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEE
Confidence 55555666 999999764210 0 001233456999999999
Q ss_pred ecccCCCChhhhhhhccccccccccCCCCCccccCC---------------C---ccCCCCC-----Ccc---eEEEEEe
Q psy710 513 YLADCPSDLIPAFYSVGARGASKRTGFSEKEWPLSG---------------G---EWSPTSC-----SYY---EVILTGH 566 (591)
Q Consensus 513 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~g---------------g---~~~~~~~-----~~~---~~l~t~~ 566 (591)
|++++ +.+.|+ .+...+.|++.+ + +.+++|+ ||+ ++|++|+
T Consensus 583 fSpdG-------~lAsgs------~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs 649 (902)
T 2oaj_A 583 NSNIG-------FVGIAY------AAGSLMLIDRRGPAIIYMENIREISGAQSACVTCIEFVIMEYGDDGYSSILMVCGT 649 (902)
T ss_dssp ECBTS-------EEEEEE------TTSEEEEEETTTTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEE
T ss_pred ecCCc-------EEEEEe------CCCcEEEEECCCCeEEEEeehhHhccccccceEEEEEEEEecCCCCCcceEEEEEe
Confidence 98873 222232 233333443322 2 5566888 774 9999999
Q ss_pred cCCcEEEEeC---CCCceeEEEE
Q psy710 567 ADGSVKFWDA---SAGNLQVLYK 586 (591)
Q Consensus 567 ~Dg~vr~Wd~---~~~~l~~~~~ 586 (591)
.||+||+||+ .+|.....+.
T Consensus 650 ~D~tv~~wd~~p~~~g~~~~~~~ 672 (902)
T 2oaj_A 650 DMGEVITYKILPASGGKFDVQLM 672 (902)
T ss_dssp TTSEEEEEEEEECGGGCEEEEEE
T ss_pred cCCcEEEEEEecCCCCcEEEEec
Confidence 9999999999 6776544443
No 32
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1e-44 Score=361.75 Aligned_cols=336 Identities=13% Similarity=0.156 Sum_probs=277.1
Q ss_pred CCCCCCcEEEeCCCCc-EEEEE----------eCCCcEEEEcCCCce---eEeeccCCcceEEEEEeecCCEEEEecCCC
Q psy710 5 GFPYQPTAIAFDPIQK-LLAIG----------TKTGSLRLLGRPGVD---AHVRHETDAAVIQMQFLTNEGALITATADD 70 (591)
Q Consensus 5 gh~~~v~~~~~spdg~-~la~g----------~~dg~i~lw~~~~~~---~~~~~~h~~~v~~l~~sp~~~~l~s~~~d~ 70 (591)
.+...|.+++|+|+|+ +||+| +.|+.|++||+.... ......|...|.+++|+|++++|++++.|+
T Consensus 10 ~~~~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg 89 (416)
T 2pm9_A 10 AEFSRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASLQVDSKFNDLDWSHNNKIIAGALDNG 89 (416)
T ss_dssp CEEEESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCCCCSSCEEEEEECSSSSCEEEEESSS
T ss_pred hhhhhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEEecCCceEEEEECCCCCeEEEEccCC
Confidence 3556799999999997 99999 889999999987432 233346889999999999999999999999
Q ss_pred eEEEEeeccc--CceeeeEEEeeccceEEEEeeCC-ceEEEEEeCCCcEEEEEeeeeeeeceecccccccccCCCCCCCc
Q psy710 71 SLHLWNFRQK--RPEIVHSLKFQRERITYIHLPLQ-SKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGP 147 (591)
Q Consensus 71 ~i~vw~~~~~--~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (591)
.|++|++... ....+..+.+|...|.+++|+|+ +++|++++.|+.|++||+.+++......
T Consensus 90 ~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~---------------- 153 (416)
T 2pm9_A 90 SLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNY---------------- 153 (416)
T ss_dssp CEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTC----------------
T ss_pred eEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccc----------------
Confidence 9999999872 11367888899999999999998 8999999999999999998754100000
Q ss_pred eeccCCCCcCcceeeeccCCCCceEEEECCC-CCEEEEEeCCCcEEEeCCCCeEEEEeccC-------CCcEEEEEEEcC
Q psy710 148 IIHLSDNPLDPSKTFRHGFPYQPTAIAFDPI-QKLLAIGTKTGSLRLLGRPGVDAHVRHET-------DAAVIQMQFLTN 219 (591)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-------~~~v~~~~~~~~ 219 (591)
. ........+|...|.+++|+|+ +.++++++.||.|++||+...+....... ...+.+++|+|+
T Consensus 154 ------~--~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 225 (416)
T 2pm9_A 154 ------T--PLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPK 225 (416)
T ss_dssp ------C--CBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSS
T ss_pred ------c--ccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCC
Confidence 0 0000001357788999999999 78999999999999999988776644332 578999999999
Q ss_pred C-ceEEEEeCCC---cEEEEEccCCCcceEEeee-eccccEEEEEecC-CCCEEEEEeCCccEEEEEccCccccceeeeh
Q psy710 220 E-GALITATADD---SLHLWNFRQKRPEIVHSLK-FQRERITYIHLPL-QSKWLYVGTEKGNIHVVNIESFTLSGYIINW 293 (591)
Q Consensus 220 ~-~~l~~~~~d~---~i~~wd~~~~~~~~~~~~~-~~~~~v~~~~~sp-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~ 293 (591)
+ .+|++++.|+ .|++||+++.. ..+..+. +|...|.+++|+| ++++|++++.|+.|++||+.+++.
T Consensus 226 ~~~~l~~~~~d~~~~~i~~~d~~~~~-~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~------- 297 (416)
T 2pm9_A 226 NSTRVATATGSDNDPSILIWDLRNAN-TPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQ------- 297 (416)
T ss_dssp CTTEEEEEECCSSSCCCCEEETTSTT-SCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCE-------
T ss_pred CCCEEEEEECCCCCceEEEEeCCCCC-CCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCcc-------
Confidence 7 5899999998 99999999753 4556677 8889999999999 999999999999999999998766
Q ss_pred hhhccccccCCCCCeEEEecCCCCC-CeEEEEEcCCEEEEEecccceEEEE---------------ec------------
Q psy710 294 NKAIDVCMKTHPGPIIHLSDNPLDP-SKLLLAYETGLVVHWDLKLKRAEFR---------------WQ------------ 345 (591)
Q Consensus 294 ~~~~~~~~~~~~~~v~~~~~sp~~~-~~l~~~~~dg~i~iwd~~~~~~~~~---------------~~------------ 345 (591)
...+..|...|.+++|+| ++ .+|++++.|+.|++||+.+...... +.
T Consensus 298 ----~~~~~~~~~~v~~~~~s~-~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (416)
T 2pm9_A 298 ----LSQFPARGNWCFKTKFAP-EAPDLFACASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPS 372 (416)
T ss_dssp ----EEEEECSSSCCCCEEECT-TCTTEEEECCSSSEEEEEESCCCCCSSCC----------------------CCSCCC
T ss_pred ----ceeecCCCCceEEEEECC-CCCCEEEEEecCCcEEEEEccCCCCCcccccccccccCCcccccccccccccccccc
Confidence 336678999999999999 88 8999999999999999987542211 00
Q ss_pred ---------cCCCeeEEEEeecCCEEEEEecCCcEEEEecC
Q psy710 346 ---------CSEPIKSVCWHYEGKQFLCSHTDGTISTWAVR 377 (591)
Q Consensus 346 ---------~~~~v~~~~~sp~g~~l~s~~~dg~i~vwd~~ 377 (591)
+..++.+++|+|+|++|++++.|+.|+||++.
T Consensus 373 ~~~~~~~~~~~~~~~~~~~s~dg~~la~~~~d~~v~~w~~~ 413 (416)
T 2pm9_A 373 VFHLQAPTWYGEPSPAAHWAFGGKLVQITPDGKGVSITNPK 413 (416)
T ss_dssp SSCCCCCSTTCCCSCCCEEETTTEEECBCTTSSCBCCBCCC
T ss_pred cccccCCccccCCccceEEeeCCeEEEEeCCCCeEEEEEec
Confidence 45678899999999999999999999999998
No 33
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=3.9e-42 Score=328.92 Aligned_cols=292 Identities=14% Similarity=0.195 Sum_probs=246.7
Q ss_pred ccCCCCCCcEEEeCCCC-cEEEEEeCCCcEEEEcCC------CceeEeeccCCcceEEEEEeecCCEEEEecCCCeEEEE
Q psy710 3 RHGFPYQPTAIAFDPIQ-KLLAIGTKTGSLRLLGRP------GVDAHVRHETDAAVIQMQFLTNEGALITATADDSLHLW 75 (591)
Q Consensus 3 ~~gh~~~v~~~~~spdg-~~la~g~~dg~i~lw~~~------~~~~~~~~~h~~~v~~l~~sp~~~~l~s~~~d~~i~vw 75 (591)
..||.+.|++++|+|++ ++|++|+.|++|++|++. +..+..+.+|...|.+++|+|++++|++++.|++|++|
T Consensus 13 l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~w 92 (319)
T 3frx_A 13 LEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLW 92 (319)
T ss_dssp ECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred EccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEE
Confidence 36899999999999965 899999999999999975 23456789999999999999999999999999999999
Q ss_pred eecccCceeeeEEEeeccceEEEEeeCCceEEEEEeCCCcEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCCC
Q psy710 76 NFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNP 155 (591)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (591)
|+.++ +.+..+.+|...|.+++|+|++++|++++.|+.|++||++... ...+
T Consensus 93 d~~~~--~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~~-~~~~------------------------- 144 (319)
T 3frx_A 93 DVATG--ETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQC-LATL------------------------- 144 (319)
T ss_dssp ETTTT--EEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTSCE-EEEE-------------------------
T ss_pred ECCCC--CeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCe-EEEE-------------------------
Confidence 99988 4788899999999999999999999999999999999986422 2222
Q ss_pred cCcceeeeccCCCCceEEEECCC------CCEEEEEeCCCcEEEeCCCCeEEEE-eccCCCcEEEEEEEcCCceEEEEeC
Q psy710 156 LDPSKTFRHGFPYQPTAIAFDPI------QKLLAIGTKTGSLRLLGRPGVDAHV-RHETDAAVIQMQFLTNEGALITATA 228 (591)
Q Consensus 156 ~~~~~~~~~~~~~~v~~~~~~~~------~~~l~~~~~dg~i~i~d~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~ 228 (591)
.+|...+.+++|.|. +..+++++.|+.|++||+...+... ...|...|.+++|+|++++|++++.
T Consensus 145 --------~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~ 216 (319)
T 3frx_A 145 --------LGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGK 216 (319)
T ss_dssp --------CCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEET
T ss_pred --------eccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeC
Confidence 257778899999985 4489999999999999998876654 3456779999999999999999999
Q ss_pred CCcEEEEEccCCCcceEEeeeeccccEEEEEecCCCCEEEEEeCCccEEEEEccCccccceeeehhhhccccccCCCCCe
Q psy710 229 DDSLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPI 308 (591)
Q Consensus 229 d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v 308 (591)
|+.|++||+.++ +.+..+..+ ..|.+++|+|++.++++++.+ .+++|++.......... .........|...+
T Consensus 217 dg~i~iwd~~~~--~~~~~~~~~-~~v~~~~~sp~~~~la~~~~~-~i~v~~~~~~~~~~~~~---~~~~~~~~~~~~~v 289 (319)
T 3frx_A 217 DGEIMLWNLAAK--KAMYTLSAQ-DEVFSLAFSPNRYWLAAATAT-GIKVFSLDPQYLVDDLR---PEFAGYSKAAEPHA 289 (319)
T ss_dssp TCEEEEEETTTT--EEEEEEECC-SCEEEEEECSSSSEEEEEETT-EEEEEEETTEEEEEEEC---CCCTTCCGGGCCCE
T ss_pred CCeEEEEECCCC--cEEEEecCC-CcEEEEEEcCCCCEEEEEcCC-CcEEEEeCcCeeeeccC---ccccccccCcCcce
Confidence 999999999988 677777765 789999999999999988765 59999998765421100 00111223466789
Q ss_pred EEEecCCCCCCeEEEEEcCCEEEEEecccc
Q psy710 309 IHLSDNPLDPSKLLLAYETGLVVHWDLKLK 338 (591)
Q Consensus 309 ~~~~~sp~~~~~l~~~~~dg~i~iwd~~~~ 338 (591)
.+++|+| ++++|++|+.|+.|++||+.++
T Consensus 290 ~~~~~sp-dg~~l~sg~~Dg~i~vWd~~t~ 318 (319)
T 3frx_A 290 VSLAWSA-DGQTLFAGYTDNVIRVWQVMTA 318 (319)
T ss_dssp EEEEECT-TSSEEEEEETTSCEEEEEEEEC
T ss_pred eEEEECC-CCCEEEEeecCceEEEEEEeec
Confidence 9999999 9999999999999999998764
No 34
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=6.3e-42 Score=331.34 Aligned_cols=300 Identities=13% Similarity=0.158 Sum_probs=243.8
Q ss_pred ccCCCCCCcEEEe-----CC-CCcEEEEEeCCCcEEEEcCCC--------ceeEeeccCCcceEEEEEeecCCEEEEecC
Q psy710 3 RHGFPYQPTAIAF-----DP-IQKLLAIGTKTGSLRLLGRPG--------VDAHVRHETDAAVIQMQFLTNEGALITATA 68 (591)
Q Consensus 3 ~~gh~~~v~~~~~-----sp-dg~~la~g~~dg~i~lw~~~~--------~~~~~~~~h~~~v~~l~~sp~~~~l~s~~~ 68 (591)
..||.+.|++++| ++ |+++||+|+.|++|++||+.. .....+.+|...|.+++|+|++.+|++++.
T Consensus 17 l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~ 96 (343)
T 2xzm_R 17 LEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSW 96 (343)
T ss_dssp EECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEET
T ss_pred eccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEcC
Confidence 4689999999999 77 999999999999999999752 245678899999999999999999999999
Q ss_pred CCeEEEEeecccCceeeeEEEeeccceEEEEeeCCceEEEEEeCCCcEEEEEeeeeeeeceecccccccccCCCCCCCce
Q psy710 69 DDSLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPI 148 (591)
Q Consensus 69 d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (591)
|++|++||+.+++ .+..+.+|...|.+++|+|++++|++++.|+.|++||+..........
T Consensus 97 D~~v~lwd~~~~~--~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~----------------- 157 (343)
T 2xzm_R 97 DKTLRLWDLRTGT--TYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAE----------------- 157 (343)
T ss_dssp TSEEEEEETTSSC--EEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCT-----------------
T ss_pred CCcEEEEECCCCc--EEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeec-----------------
Confidence 9999999999884 678899999999999999999999999999999999987422111100
Q ss_pred eccCCCCcCcceeeeccCCCCceEEEECCCC----------CEEEEEeCCCcEEEeCCCCeEEEEeccCCCcEEEEEEEc
Q psy710 149 IHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQ----------KLLAIGTKTGSLRLLGRPGVDAHVRHETDAAVIQMQFLT 218 (591)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~----------~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~v~~~~~~~ 218 (591)
..+|...+.+++|+|++ .++++++.||.|++||...........+...|.+++|+|
T Consensus 158 --------------~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~h~~~v~~~~~s~ 223 (343)
T 2xzm_R 158 --------------KENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNFQIRYTFKAHESNVNHLSISP 223 (343)
T ss_dssp --------------TTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETTTEEEEEEECCSSCEEEEEECT
T ss_pred --------------ccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCCCceeEEEcCccccceEEEECC
Confidence 02467778999999986 789999999999999976665555666777999999999
Q ss_pred CCceEEEEeCCCcEEEEEccCCCcceEEeeeeccccEEEEEecCCCCEEEEEeCCccEEEEEccCccccce-eeeh-hhh
Q psy710 219 NEGALITATADDSLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGY-IINW-NKA 296 (591)
Q Consensus 219 ~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~-~~~~-~~~ 296 (591)
++++|++++.|+.|++||+.... .....+. +...|.+++|+|++++++++ .|+.|++|++.+.+.... .+.. ...
T Consensus 224 ~g~~l~sgs~dg~v~iwd~~~~~-~~~~~~~-~~~~v~~v~~sp~~~~la~~-~d~~v~iw~~~~~~~~~~~~~~~~~~~ 300 (343)
T 2xzm_R 224 NGKYIATGGKDKKLLIWDILNLT-YPQREFD-AGSTINQIAFNPKLQWVAVG-TDQGVKIFNLMTQSKAPVCTIEAEPIT 300 (343)
T ss_dssp TSSEEEEEETTCEEEEEESSCCS-SCSEEEE-CSSCEEEEEECSSSCEEEEE-ESSCEEEEESSSCCSCSEEECCCCSGG
T ss_pred CCCEEEEEcCCCeEEEEECCCCc-ccceeec-CCCcEEEEEECCCCCEEEEE-CCCCEEEEEeCCCCCCceEEeecCcch
Confidence 99999999999999999995432 2333332 34679999999999988755 577899999987654321 0000 000
Q ss_pred ccccccCCCCCeEEEecCCCCCCeEEEEEcCCEEEEEecccce
Q psy710 297 IDVCMKTHPGPIIHLSDNPLDPSKLLLAYETGLVVHWDLKLKR 339 (591)
Q Consensus 297 ~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~iwd~~~~~ 339 (591)
......+|...|.+++|+| ++++|++|+.||.|++|++.++.
T Consensus 301 ~~~~~~~~~~~v~~~~~sp-~g~~l~sg~~Dg~v~~w~~~~g~ 342 (343)
T 2xzm_R 301 KAEGQKGKNPQCTSLAWNA-LGKKLFAGFTDGVIRTFSFETSA 342 (343)
T ss_dssp GBTTBCCSCCCEEEEEECS-SSCCEEEEETTSEEEEEEEEEEE
T ss_pred hhhhhcCCCCceEEEEECC-CCCeEEEecCCceEEEEEEEccC
Confidence 0112347888999999999 99999999999999999987653
No 35
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.5e-42 Score=328.61 Aligned_cols=306 Identities=13% Similarity=0.149 Sum_probs=237.0
Q ss_pred ceeEeeccCCcceEEEEEeecCCEEEEecCCCeEEEEeecccCceeeeEE-Ee-eccceEEEEeeCCceEEEEEeCCCcE
Q psy710 39 VDAHVRHETDAAVIQMQFLTNEGALITATADDSLHLWNFRQKRPEIVHSL-KF-QRERITYIHLPLQSKWLYVGTEKGNI 116 (591)
Q Consensus 39 ~~~~~~~~h~~~v~~l~~sp~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~-~~-~~~~v~~~~~~~~~~~l~~~~~d~~i 116 (591)
..+..+.+|.++|++++|+|+ +|++++.|++|++||+..+.......+ .. |...|.+++|+|++++|++++.|+.|
T Consensus 5 ~~~~~~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v 82 (330)
T 2hes_X 5 NLIKSLKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTV 82 (330)
T ss_dssp EEEEEEECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCE
T ss_pred ccceeeccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcE
Confidence 346678899999999999987 999999999999999987643455555 34 88999999999999999999999999
Q ss_pred EEEEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCCCCEEEEEeCCCcEEEeCC
Q psy710 117 HVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGR 196 (591)
Q Consensus 117 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~ 196 (591)
++||+....... ...+....+ .+|...|.+++|+|++++|++|+.|+.|++||+
T Consensus 83 ~iw~~~~~~~~~-------------------------~~~~~~~~~-~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~ 136 (330)
T 2hes_X 83 SIWAKEESADRT-------------------------FEMDLLAII-EGHENEVKGVAWSNDGYYLATCSRDKSVWIWET 136 (330)
T ss_dssp EEEEC--------------------------------CCCEEEEEE-C----CEEEEEECTTSCEEEEEETTSCEEEEEC
T ss_pred EEEEcccCcCcc-------------------------ccceeEEEE-cCCCCcEEEEEECCCCCEEEEEeCCCEEEEEec
Confidence 999986421000 000111112 478889999999999999999999999999998
Q ss_pred CC----eEE-EEeccCCCcEEEEEEEcCCceEEEEeCCCcEEEEEccCCCcceEEeeeeccccEEEEEecCC--CCEEEE
Q psy710 197 PG----VDA-HVRHETDAAVIQMQFLTNEGALITATADDSLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQ--SKWLYV 269 (591)
Q Consensus 197 ~~----~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~sp~--~~~l~~ 269 (591)
.. .+. .....|...|.+++|+|++++|++++.|++|++||......+++..+.+|...|.+++|+|+ +.+|++
T Consensus 137 ~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s 216 (330)
T 2hes_X 137 DESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCS 216 (330)
T ss_dssp CTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEE
T ss_pred cCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEE
Confidence 42 123 23445677999999999999999999999999999987644578889999999999999998 678999
Q ss_pred EeCCccEEEEEccCccccceeeehhhhcccccc-CCCCCeEEEecCCCCCCeEEEEEcCCEEEEEecccceE--EEEe--
Q psy710 270 GTEKGNIHVVNIESFTLSGYIINWNKAIDVCMK-THPGPIIHLSDNPLDPSKLLLAYETGLVVHWDLKLKRA--EFRW-- 344 (591)
Q Consensus 270 ~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~~l~~~~~dg~i~iwd~~~~~~--~~~~-- 344 (591)
++.|++|++||+......... .+ .....+. .|...|.+++|++ ++ +|++++.||.|++||..+++. ....
T Consensus 217 ~s~D~~v~iw~~~~~~~~~~~-~~--~~~~~~~~~h~~~v~~v~~s~-~~-~l~s~~~dg~v~iw~~~~~~~~~~~~~~~ 291 (330)
T 2hes_X 217 GSDDSTVRVWKYMGDDEDDQQ-EW--VCEAILPDVHKRQVYNVAWGF-NG-LIASVGADGVLAVYEEVDGEWKVFAKRAL 291 (330)
T ss_dssp EETTSCEEEEEEEEECTTSCE-EE--EEEEECCSCCSSCEEEEEECT-TS-CEEEEETTSCEEEEEEETTEEEEEEEESC
T ss_pred EeCCCeEEEEEecCCCccccc-ee--EEeeecccccccceEEEEEcC-CC-EEEEEeCCCEEEEEEcCCCceEEEecccc
Confidence 999999999999765321100 00 0011333 4899999999998 54 899999999999999988742 3222
Q ss_pred ccCC-CeeEEEEee--cCCEEEEEecCCcEEEEecC
Q psy710 345 QCSE-PIKSVCWHY--EGKQFLCSHTDGTISTWAVR 377 (591)
Q Consensus 345 ~~~~-~v~~~~~sp--~g~~l~s~~~dg~i~vwd~~ 377 (591)
.|.. .|.+++|+| ++++|++++.||+|++||++
T Consensus 292 ~h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~~ 327 (330)
T 2hes_X 292 CHGVYEINVVKWLELNGKTILATGGDDGIVNFWSLE 327 (330)
T ss_dssp TTTTSCEEEEEEC-----CCEEEEETTSEEEEEEC-
T ss_pred ccccceEEEEEEecCCCceEEEEecCCCcEEEEEec
Confidence 3666 899999999 78999999999999999987
No 36
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=6.8e-42 Score=331.14 Aligned_cols=290 Identities=14% Similarity=0.194 Sum_probs=244.0
Q ss_pred ceeEeeccCCcceEEEEE-----ee-cCCEEEEecCCCeEEEEeecccC-----ceeeeEEEeeccceEEEEeeCCceEE
Q psy710 39 VDAHVRHETDAAVIQMQF-----LT-NEGALITATADDSLHLWNFRQKR-----PEIVHSLKFQRERITYIHLPLQSKWL 107 (591)
Q Consensus 39 ~~~~~~~~h~~~v~~l~~-----sp-~~~~l~s~~~d~~i~vw~~~~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~l 107 (591)
.....+.+|.+.|++++| ++ ++++|++++.|++|++||+...+ ......+.+|...|.+++|+|++.++
T Consensus 12 ~~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l 91 (343)
T 2xzm_R 12 VKRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFA 91 (343)
T ss_dssp EEEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEE
T ss_pred eeeeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEE
Confidence 345678899999999999 76 89999999999999999997543 23566788999999999999999999
Q ss_pred EEEeCCCcEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCCCCEEEEEeC
Q psy710 108 YVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTK 187 (591)
Q Consensus 108 ~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 187 (591)
++++.|++|++||+.+++....+. +|...|.+++|+|++++|++++.
T Consensus 92 ~s~s~D~~v~lwd~~~~~~~~~~~---------------------------------~h~~~v~~v~~sp~~~~l~s~~~ 138 (343)
T 2xzm_R 92 ISSSWDKTLRLWDLRTGTTYKRFV---------------------------------GHQSEVYSVAFSPDNRQILSAGA 138 (343)
T ss_dssp EEEETTSEEEEEETTSSCEEEEEE---------------------------------CCCSCEEEEEECSSTTEEEEEET
T ss_pred EEEcCCCcEEEEECCCCcEEEEEc---------------------------------CCCCcEEEEEECCCCCEEEEEcC
Confidence 999999999999999877655544 67788999999999999999999
Q ss_pred CCcEEEeCCCCeEEEEec---cCCCcEEEEEEEcCC----------ceEEEEeCCCcEEEEEccCCCcceEEeeeecccc
Q psy710 188 TGSLRLLGRPGVDAHVRH---ETDAAVIQMQFLTNE----------GALITATADDSLHLWNFRQKRPEIVHSLKFQRER 254 (591)
Q Consensus 188 dg~i~i~d~~~~~~~~~~---~~~~~v~~~~~~~~~----------~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~ 254 (591)
|+.|++||+......... .+...|.+++|+|++ .+|++++.|+.|++||.. . .....+.+|...
T Consensus 139 d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~-~--~~~~~~~~h~~~ 215 (343)
T 2xzm_R 139 EREIKLWNILGECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTN-F--QIRYTFKAHESN 215 (343)
T ss_dssp TSCEEEEESSSCEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETT-T--EEEEEEECCSSC
T ss_pred CCEEEEEeccCCceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCC-C--ceeEEEcCcccc
Confidence 999999999865544433 456789999999987 789999999999999943 3 567788899999
Q ss_pred EEEEEecCCCCEEEEEeCCccEEEEEccCccccceeeehhhhccccccCCCCCeEEEecCCCCCCeEEEEEcCCEEEEEe
Q psy710 255 ITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKLLLAYETGLVVHWD 334 (591)
Q Consensus 255 v~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~iwd 334 (591)
|.+++|+|++++|++|+.|+.|++||+...... . ....+...|.+++|+| ++.+++++ .|+.|++||
T Consensus 216 v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~----------~-~~~~~~~~v~~v~~sp-~~~~la~~-~d~~v~iw~ 282 (343)
T 2xzm_R 216 VNHLSISPNGKYIATGGKDKKLLIWDILNLTYP----------Q-REFDAGSTINQIAFNP-KLQWVAVG-TDQGVKIFN 282 (343)
T ss_dssp EEEEEECTTSSEEEEEETTCEEEEEESSCCSSC----------S-EEEECSSCEEEEEECS-SSCEEEEE-ESSCEEEEE
T ss_pred ceEEEECCCCCEEEEEcCCCeEEEEECCCCccc----------c-eeecCCCcEEEEEECC-CCCEEEEE-CCCCEEEEE
Confidence 999999999999999999999999999543321 1 1123456799999999 88777654 578899999
Q ss_pred cccceEEE--Ee------------ccCCCeeEEEEeecCCEEEEEecCCcEEEEecC
Q psy710 335 LKLKRAEF--RW------------QCSEPIKSVCWHYEGKQFLCSHTDGTISTWAVR 377 (591)
Q Consensus 335 ~~~~~~~~--~~------------~~~~~v~~~~~sp~g~~l~s~~~dg~i~vwd~~ 377 (591)
+.+++... .+ .|...|.+++|+|+|++|++|+.||.|++|++.
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~~Dg~v~~w~~~ 339 (343)
T 2xzm_R 283 LMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKKLFAGFTDGVIRTFSFE 339 (343)
T ss_dssp SSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCCEEEEETTSEEEEEEEE
T ss_pred eCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCCeEEEecCCceEEEEEEE
Confidence 98765432 22 366789999999999999999999999999987
No 37
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=5.1e-42 Score=338.31 Aligned_cols=334 Identities=13% Similarity=0.170 Sum_probs=262.1
Q ss_pred cCCCCCCcEEEeCCCCcE----EEEEeCCCcEEEEcCCCc-----eeEeeccCCcceEEEEEeecCCEEEEecCCCeEEE
Q psy710 4 HGFPYQPTAIAFDPIQKL----LAIGTKTGSLRLLGRPGV-----DAHVRHETDAAVIQMQFLTNEGALITATADDSLHL 74 (591)
Q Consensus 4 ~gh~~~v~~~~~spdg~~----la~g~~dg~i~lw~~~~~-----~~~~~~~h~~~v~~l~~sp~~~~l~s~~~d~~i~v 74 (591)
.+|..++..+.+..+.+. +.-...+ ...+|+.... .+.....|...|.+++|+|+|++|++++ ++++++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fspdg~~la~g~-~~~v~i 89 (393)
T 1erj_A 12 ANHSKPIPPFLLDLDSQSVPDALKKQTND-YYILYNPALPREIDVELHKSLDHTSVVCCVKFSNDGEYLATGC-NKTTQV 89 (393)
T ss_dssp SCTTCCCCHHHHCCCSSSSCTTSEEECSS-CEEEECTTSCCCEEEEEEEEEECSSCCCEEEECTTSSEEEEEC-BSCEEE
T ss_pred ccccccCCCccccCChhHCcHhHhccCCc-eEEEECCCCCcccCceeEEecCCCCEEEEEEECCCCCEEEEEc-CCcEEE
Confidence 345555554433333322 2223333 3557764421 1222336999999999999999999986 689999
Q ss_pred EeecccCceeeeEEEeec------------------cceEEEEeeCCceEEEEEeCCCcEEEEEeeeeeeeceecccccc
Q psy710 75 WNFRQKRPEIVHSLKFQR------------------ERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKA 136 (591)
Q Consensus 75 w~~~~~~~~~~~~~~~~~------------------~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~ 136 (591)
|++.+++ .+..+..+. ..|.+++|+|++++|++++.|+.|++||+.+++....+.
T Consensus 90 ~~~~~g~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~----- 162 (393)
T 1erj_A 90 YRVSDGS--LVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQ----- 162 (393)
T ss_dssp EETTTCC--EEEEECC-----------------CCCCBEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC-----
T ss_pred EEecCCC--EEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEc-----
Confidence 9998875 455554432 248999999999999999999999999999877655544
Q ss_pred cccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCCCCEEEEEeCCCcEEEeCCCCeEEEEeccCCCcEEEEEE
Q psy710 137 IDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGVDAHVRHETDAAVIQMQF 216 (591)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~v~~~~~ 216 (591)
+|...|.+++|+|++++|++++.|+.|++||+.+.+......+...+.+++|
T Consensus 163 ----------------------------~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~ 214 (393)
T 1erj_A 163 ----------------------------GHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAV 214 (393)
T ss_dssp ----------------------------CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEE
T ss_pred ----------------------------cCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEEcCCCcEEEEE
Confidence 6778899999999999999999999999999998887766666678999999
Q ss_pred Ec-CCceEEEEeCCCcEEEEEccCCCcceEEee-------eeccccEEEEEecCCCCEEEEEeCCccEEEEEccCccccc
Q psy710 217 LT-NEGALITATADDSLHLWNFRQKRPEIVHSL-------KFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSG 288 (591)
Q Consensus 217 ~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~-------~~~~~~v~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~ 288 (591)
+| ++++|++++.|+.|++||++++ ..+..+ .+|...|.+++|+|++++|++|+.|+.|++||+.+.....
T Consensus 215 ~~~~~~~l~~~s~d~~v~iwd~~~~--~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~ 292 (393)
T 1erj_A 215 SPGDGKYIAAGSLDRAVRVWDSETG--FLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKS 292 (393)
T ss_dssp CSTTCCEEEEEETTSCEEEEETTTC--CEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC-------
T ss_pred ECCCCCEEEEEcCCCcEEEEECCCC--cEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcc
Confidence 99 8999999999999999999987 555555 5688899999999999999999999999999998754321
Q ss_pred eee-ehhhhccccccCCCCCeEEEecCCCCCCeEEEEEcCCEEEEEecccceEEEEec-cCCCeeEEEEee------cCC
Q psy710 289 YII-NWNKAIDVCMKTHPGPIIHLSDNPLDPSKLLLAYETGLVVHWDLKLKRAEFRWQ-CSEPIKSVCWHY------EGK 360 (591)
Q Consensus 289 ~~~-~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp------~g~ 360 (591)
... .........+.+|...|.+++|+| ++.+|++++.|+.|++||+.+++.+..+. |...|.+++|++ +++
T Consensus 293 ~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~~v~~~~~~~~~p~~~ 371 (393)
T 1erj_A 293 DSKTPNSGTCEVTYIGHKDFVLSVATTQ-NDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYN 371 (393)
T ss_dssp --------CEEEEEECCSSCEEEEEECG-GGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTTCE
T ss_pred cccCCCCCcceEEEecccCcEEEEEECC-CCCEEEEEeCCCeEEEEECCCCeEEEEECCCCCCEEEEEecCCcCcCCCCC
Confidence 000 000111235678999999999999 99999999999999999999998887765 999999999986 688
Q ss_pred EEEEEecCCcEEEEecC
Q psy710 361 QFLCSHTDGTISTWAVR 377 (591)
Q Consensus 361 ~l~s~~~dg~i~vwd~~ 377 (591)
+|++++.||+|++|++.
T Consensus 372 ~l~sgs~Dg~i~iW~~~ 388 (393)
T 1erj_A 372 VFATGSGDCKARIWKYK 388 (393)
T ss_dssp EEEEEETTSEEEEEEEE
T ss_pred EEEEECCCCcEEECccc
Confidence 99999999999999987
No 38
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=3e-43 Score=345.49 Aligned_cols=299 Identities=13% Similarity=0.174 Sum_probs=252.4
Q ss_pred ccCCCCCCcEEEeCCCCcEEEEEeCCCcEEEEcCC-CceeEeeccCCcceEEEEEeecCCEEEEecCCCeEEEEeecccC
Q psy710 3 RHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRP-GVDAHVRHETDAAVIQMQFLTNEGALITATADDSLHLWNFRQKR 81 (591)
Q Consensus 3 ~~gh~~~v~~~~~spdg~~la~g~~dg~i~lw~~~-~~~~~~~~~h~~~v~~l~~sp~~~~l~s~~~d~~i~vw~~~~~~ 81 (591)
..||.+.|++++|+|+|++||+|+.||+|+|||.. +.....+..|...|.+++|+|++++|++++.|+.+++|++.+..
T Consensus 62 l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~ 141 (380)
T 3iz6_a 62 LQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQA 141 (380)
T ss_dssp ECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCCS
T ss_pred ccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCc
Confidence 46899999999999999999999999999999987 67778899999999999999999999999999999999997532
Q ss_pred -----ceeeeEEEeeccceEEEEeeCCc-eEEEEEeCCCcEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCCC
Q psy710 82 -----PEIVHSLKFQRERITYIHLPLQS-KWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNP 155 (591)
Q Consensus 82 -----~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (591)
......+.+|.+.|.++.|.|++ ..|++++.|++|++||+.+++....+...
T Consensus 142 ~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~---------------------- 199 (380)
T 3iz6_a 142 DRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSE---------------------- 199 (380)
T ss_dssp SCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCC----------------------
T ss_pred cccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecc----------------------
Confidence 12345678999999999999974 57999999999999999987765544211
Q ss_pred cCcceeeeccCCCCceEEEECC-CCCEEEEEeCCCcEEEeCCCC--eEEEEeccCCCcEEEEEEEcCCceEEEEeCCCcE
Q psy710 156 LDPSKTFRHGFPYQPTAIAFDP-IQKLLAIGTKTGSLRLLGRPG--VDAHVRHETDAAVIQMQFLTNEGALITATADDSL 232 (591)
Q Consensus 156 ~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~i~d~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i 232 (591)
+..+|...|.+++|++ +++++++|+.|+.|++||+.. ........|...|.+++|+|++++|++++.|++|
T Consensus 200 ------~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i 273 (380)
T 3iz6_a 200 ------FPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTC 273 (380)
T ss_dssp ------SSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCE
T ss_pred ------cCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeE
Confidence 1135778899999987 889999999999999999863 2333455567799999999999999999999999
Q ss_pred EEEEccCCCcceEEeeeecc-------ccEEEEEecCCCCEEEEEeCCccEEEEEccCccccceeeehhhhccccccCCC
Q psy710 233 HLWNFRQKRPEIVHSLKFQR-------ERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHP 305 (591)
Q Consensus 233 ~~wd~~~~~~~~~~~~~~~~-------~~v~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (591)
++||++++ ..+..+..+. ..|++++|+|+|++|++|+.||.|++||+..++.... ......+|.
T Consensus 274 ~lwd~~~~--~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~-------~~~~~~~h~ 344 (380)
T 3iz6_a 274 RLFDMRTG--HQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLN-------LGTLQNSHE 344 (380)
T ss_dssp EEEETTTT--EEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEE-------ECCSCSSCC
T ss_pred EEEECCCC--cEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEE-------EecccCCCC
Confidence 99999988 6666665432 2488999999999999999999999999987665310 011236899
Q ss_pred CCeEEEecCCCCCCeEEEEEcCCEEEEEecccce
Q psy710 306 GPIIHLSDNPLDPSKLLLAYETGLVVHWDLKLKR 339 (591)
Q Consensus 306 ~~v~~~~~sp~~~~~l~~~~~dg~i~iwd~~~~~ 339 (591)
+.|.+++|+| ++++|++|+.|+.|++|++...+
T Consensus 345 ~~v~~l~~s~-dg~~l~sgs~D~~i~iW~~~~~~ 377 (380)
T 3iz6_a 345 GRISCLGLSS-DGSALCTGSWDKNLKIWAFSGHR 377 (380)
T ss_dssp CCCCEEEECS-SSSEEEEECTTSCEEEEECCSSS
T ss_pred CceEEEEECC-CCCEEEEeeCCCCEEEEecCCCc
Confidence 9999999999 99999999999999999998653
No 39
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=1.5e-41 Score=324.64 Aligned_cols=284 Identities=14% Similarity=0.261 Sum_probs=250.6
Q ss_pred cCCCCCCcEEEeCCCCcEEEEEeCCCcEEEEcCC-CceeEeeccCCcceEEEEEeecCCEEEEecCCCeEEEEeecccCc
Q psy710 4 HGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRP-GVDAHVRHETDAAVIQMQFLTNEGALITATADDSLHLWNFRQKRP 82 (591)
Q Consensus 4 ~gh~~~v~~~~~spdg~~la~g~~dg~i~lw~~~-~~~~~~~~~h~~~v~~l~~sp~~~~l~s~~~d~~i~vw~~~~~~~ 82 (591)
.||.+.|++++|+|+|++||+|+.||.|++|+.. +.....+.+|...|.+++|+|++++|++++.|+.|++||+.+++
T Consensus 20 ~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~- 98 (312)
T 4ery_A 20 AGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGK- 98 (312)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC-
T ss_pred cccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCc-
Confidence 5899999999999999999999999999999986 66777889999999999999999999999999999999999874
Q ss_pred eeeeEEEeeccceEEEEeeCCceEEEEEeCCCcEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCcceee
Q psy710 83 EIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTF 162 (591)
Q Consensus 83 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (591)
.+..+.+|...|.+++|+|++++|++++.|+.|++||+.+++....+.
T Consensus 99 -~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~------------------------------- 146 (312)
T 4ery_A 99 -CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLP------------------------------- 146 (312)
T ss_dssp -EEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEEC-------------------------------
T ss_pred -EEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEec-------------------------------
Confidence 688899999999999999999999999999999999998876655543
Q ss_pred eccCCCCceEEEECCCCCEEEEEeCCCcEEEeCCCCeEEEEec--cCCCcEEEEEEEcCCceEEEEeCCCcEEEEEccCC
Q psy710 163 RHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGVDAHVRH--ETDAAVIQMQFLTNEGALITATADDSLHLWNFRQK 240 (591)
Q Consensus 163 ~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~ 240 (591)
.|...|.+++|+|+++++++++.||.|++||+.+.+..... .+...+..++|+|++++|++++.|+.|++||++++
T Consensus 147 --~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~ 224 (312)
T 4ery_A 147 --AHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKG 224 (312)
T ss_dssp --CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTT
T ss_pred --CCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCC
Confidence 45677899999999999999999999999999887665432 34568999999999999999999999999999988
Q ss_pred CcceEEeeeeccccE---EEEEecCCCCEEEEEeCCccEEEEEccCccccceeeehhhhccccccCCCCCeEEEecCCCC
Q psy710 241 RPEIVHSLKFQRERI---TYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLD 317 (591)
Q Consensus 241 ~~~~~~~~~~~~~~v---~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~ 317 (591)
+.+..+.+|.... ......++++++++|+.||.|++||+.+.+. ...+.+|...|.+++|+| +
T Consensus 225 --~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~-----------~~~~~~h~~~v~~~~~~p-~ 290 (312)
T 4ery_A 225 --KCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEI-----------VQKLQGHTDVVISTACHP-T 290 (312)
T ss_dssp --EEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCCE-----------EEEECCCSSCEEEEEECS-S
T ss_pred --cEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCchh-----------hhhhhccCCcEEEEeecC-c
Confidence 7788887775543 2233446789999999999999999998776 336789999999999999 9
Q ss_pred CCeEEEEE--cCCEEEEEecc
Q psy710 318 PSKLLLAY--ETGLVVHWDLK 336 (591)
Q Consensus 318 ~~~l~~~~--~dg~i~iwd~~ 336 (591)
++++++++ .|+.|++|+..
T Consensus 291 ~~~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 291 ENIIASAALENDKTIKLWKSD 311 (312)
T ss_dssp SSEEEEEECTTTCCEEEEECC
T ss_pred CCceEEEEccCCccEEEecCC
Confidence 99999987 69999999864
No 40
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=8.6e-42 Score=336.69 Aligned_cols=286 Identities=13% Similarity=0.171 Sum_probs=244.0
Q ss_pred CCCCCCcEEEeCCCCcEEEEEeCCCcEEEEcCC-CceeEeeccCC------------------cceEEEEEeecCCEEEE
Q psy710 5 GFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRP-GVDAHVRHETD------------------AAVIQMQFLTNEGALIT 65 (591)
Q Consensus 5 gh~~~v~~~~~spdg~~la~g~~dg~i~lw~~~-~~~~~~~~~h~------------------~~v~~l~~sp~~~~l~s 65 (591)
+|.+.|++++|||||++||+|+ ++.+++|++. +..+..+..|. ..|.+++|+|++++|++
T Consensus 62 ~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s 140 (393)
T 1erj_A 62 DHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLAT 140 (393)
T ss_dssp ECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEE
T ss_pred CCCCEEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEE
Confidence 6999999999999999999986 6799999987 55555555443 24999999999999999
Q ss_pred ecCCCeEEEEeecccCceeeeEEEeeccceEEEEeeCCceEEEEEeCCCcEEEEEeeeeeeeceecccccccccCCCCCC
Q psy710 66 ATADDSLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHP 145 (591)
Q Consensus 66 ~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (591)
++.|++|++||+.++ +.+..+.+|...|.+++|+|+++.|++++.|+.|++||+.+++....+.
T Consensus 141 ~~~d~~i~iwd~~~~--~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~-------------- 204 (393)
T 1erj_A 141 GAEDRLIRIWDIENR--KIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLS-------------- 204 (393)
T ss_dssp EETTSCEEEEETTTT--EEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE--------------
T ss_pred EcCCCeEEEEECCCC--cEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEE--------------
Confidence 999999999999987 4778899999999999999999999999999999999999877554433
Q ss_pred CceeccCCCCcCcceeeeccCCCCceEEEECC-CCCEEEEEeCCCcEEEeCCCCeEEEEe--------ccCCCcEEEEEE
Q psy710 146 GPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDP-IQKLLAIGTKTGSLRLLGRPGVDAHVR--------HETDAAVIQMQF 216 (591)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~--------~~~~~~v~~~~~ 216 (591)
+...+.+++|+| +++++++|+.||.|++||..+...... ..|...|.+++|
T Consensus 205 --------------------~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~ 264 (393)
T 1erj_A 205 --------------------IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVF 264 (393)
T ss_dssp --------------------CSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEE
T ss_pred --------------------cCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEE
Confidence 345689999999 899999999999999999987765432 245679999999
Q ss_pred EcCCceEEEEeCCCcEEEEEccCCC----------cceEEeeeeccccEEEEEecCCCCEEEEEeCCccEEEEEccCccc
Q psy710 217 LTNEGALITATADDSLHLWNFRQKR----------PEIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTL 286 (591)
Q Consensus 217 ~~~~~~l~~~~~d~~i~~wd~~~~~----------~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~ 286 (591)
+|++++|++++.|+.|++||++... ..+...+.+|...|.+++|+|++++|++|+.|+.|++||+.+++.
T Consensus 265 ~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~ 344 (393)
T 1erj_A 265 TRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNP 344 (393)
T ss_dssp CTTSSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCE
T ss_pred CCCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeE
Confidence 9999999999999999999997531 235567788999999999999999999999999999999998776
Q ss_pred cceeeehhhhccccccCCCCCeEEEecCCC-----CCCeEEEEEcCCEEEEEecccc
Q psy710 287 SGYIINWNKAIDVCMKTHPGPIIHLSDNPL-----DPSKLLLAYETGLVVHWDLKLK 338 (591)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~-----~~~~l~~~~~dg~i~iwd~~~~ 338 (591)
...+.+|...|.+++|++. ++++|++|+.|+.|++|++...
T Consensus 345 -----------~~~l~~h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~~~ 390 (393)
T 1erj_A 345 -----------LLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYKKI 390 (393)
T ss_dssp -----------EEEEECCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEEEC
T ss_pred -----------EEEECCCCCCEEEEEecCCcCcCCCCCEEEEECCCCcEEECccccc
Confidence 3367889999999998751 5789999999999999998653
No 41
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=3.7e-42 Score=343.71 Aligned_cols=320 Identities=11% Similarity=0.050 Sum_probs=264.0
Q ss_pred CCCcEEEeCCCCcEEEEEeCCCcEEEEcCCCc-eeEeeccCCcceEEEEEeecCCEEEEecCCCeEEEEeecccCceeee
Q psy710 8 YQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGV-DAHVRHETDAAVIQMQFLTNEGALITATADDSLHLWNFRQKRPEIVH 86 (591)
Q Consensus 8 ~~v~~~~~spdg~~la~g~~dg~i~lw~~~~~-~~~~~~~h~~~v~~l~~sp~~~~l~s~~~d~~i~vw~~~~~~~~~~~ 86 (591)
..+++++|+|+|++|++|+.||.|++||+... ....+..| ..+....|+|++++|++++.|+.|++||+.++ ....
T Consensus 57 ~~~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~--~~~~ 133 (420)
T 3vl1_A 57 DAGKGNTFEKVGSHLYKARLDGHDFLFNTIIRDGSKMLKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFN--LQRE 133 (420)
T ss_dssp BCCTTCEEEEEETTEEEEEETTEEEEEECCSEETTTTSCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSC--EEEE
T ss_pred ccccceeeeecCCeEEEEEcCCcEEEEEecccceeeEEecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCc--ceee
Confidence 44668999999999999999999999998743 33344445 55566678999999999999999999999876 4566
Q ss_pred EEEeeccceEEEEeeCCceEEEEEeCCCcEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCcceeeeccC
Q psy710 87 SLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGF 166 (591)
Q Consensus 87 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (591)
.+.+|...|.+++|+|++++|++++.|+.|++||+.+++....+. +|
T Consensus 134 ~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~---------------------------------~h 180 (420)
T 3vl1_A 134 IDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLI---------------------------------GH 180 (420)
T ss_dssp ETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEE---------------------------------CC
T ss_pred ecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEc---------------------------------CC
Confidence 777899999999999999999999999999999998866544443 57
Q ss_pred CCCceEEEECCCCCEEEEEeCCCcEEEeCCCCeEEEEecc----CCCcEEE---------------------EEEEcCCc
Q psy710 167 PYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGVDAHVRHE----TDAAVIQ---------------------MQFLTNEG 221 (591)
Q Consensus 167 ~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~----~~~~v~~---------------------~~~~~~~~ 221 (591)
...|.+++|+|++++|++++.||.|++||+.+.+...... +...+.+ ++|+|+++
T Consensus 181 ~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 260 (420)
T 3vl1_A 181 RATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGK 260 (420)
T ss_dssp SSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTE
T ss_pred CCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCC
Confidence 7889999999999999999999999999998877664432 2334444 44578899
Q ss_pred eEEEEeCCCcEEEEEccCCCcceEEee-eeccccEEEEEecCCCC-EEEEEeCCccEEEEEccCccccceeeehhhhccc
Q psy710 222 ALITATADDSLHLWNFRQKRPEIVHSL-KFQRERITYIHLPLQSK-WLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDV 299 (591)
Q Consensus 222 ~l~~~~~d~~i~~wd~~~~~~~~~~~~-~~~~~~v~~~~~sp~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~ 299 (591)
+|++++.||.|++||++++ +.+..+ ..|...|.+++|+|+++ +|++|+.||.|++||+++++.. ..
T Consensus 261 ~l~~~~~dg~i~i~d~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~----------~~ 328 (420)
T 3vl1_A 261 YVIAGHVSGVITVHNVFSK--EQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECP----------VG 328 (420)
T ss_dssp EEEEEETTSCEEEEETTTC--CEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSC----------SE
T ss_pred EEEEEcCCCeEEEEECCCC--ceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCc----------hh
Confidence 9999999999999999987 444444 45778999999999998 9999999999999999987542 12
Q ss_pred cccC-CCCCeEEEecCCCCCCeEEEEEcCCEEEEEecccc----------eEEEEeccCCCeeEEEEeecCC---EEEEE
Q psy710 300 CMKT-HPGPIIHLSDNPLDPSKLLLAYETGLVVHWDLKLK----------RAEFRWQCSEPIKSVCWHYEGK---QFLCS 365 (591)
Q Consensus 300 ~~~~-~~~~v~~~~~sp~~~~~l~~~~~dg~i~iwd~~~~----------~~~~~~~~~~~v~~~~~sp~g~---~l~s~ 365 (591)
.+.. |...+.++.+ + ++++|++++.|+.|++||+... .......+...|.+++|+|+++ .|+++
T Consensus 329 ~~~~~~~~~v~~~~~-~-~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~g~l~a~ 406 (420)
T 3vl1_A 329 EFLINEGTPINNVYF-A-AGALFVSSGFDTSIKLDIISDPESERPAIEFETPTFLVSNDDAVSQFCYVSDDESNGEVLEV 406 (420)
T ss_dssp EEEESTTSCEEEEEE-E-TTEEEEEETTTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEEEECCSSSSCEEEEE
T ss_pred hhhccCCCCceEEEe-C-CCCEEEEecCCccEEEEeccCCCCCccceeccCccEEccCCcceEEEEEccCCCCcceEEEE
Confidence 3333 6777888855 5 6789999999999999998862 2334455889999999999999 78888
Q ss_pred ecCCcEEEEecC
Q psy710 366 HTDGTISTWAVR 377 (591)
Q Consensus 366 ~~dg~i~vwd~~ 377 (591)
+.+|.+.+|++.
T Consensus 407 g~~g~~~~~~~~ 418 (420)
T 3vl1_A 407 GKNNFCALYNLS 418 (420)
T ss_dssp ETTTEEEEEESC
T ss_pred cCCceEEEEecc
Confidence 899999999987
No 42
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.2e-41 Score=322.75 Aligned_cols=291 Identities=11% Similarity=0.149 Sum_probs=228.8
Q ss_pred ccCCCCCCcEEEeCCCCcEEEEEeCCCcEEEEcCCC---ceeEee-cc-CCcceEEEEEeecCCEEEEecCCCeEEEEee
Q psy710 3 RHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPG---VDAHVR-HE-TDAAVIQMQFLTNEGALITATADDSLHLWNF 77 (591)
Q Consensus 3 ~~gh~~~v~~~~~spdg~~la~g~~dg~i~lw~~~~---~~~~~~-~~-h~~~v~~l~~sp~~~~l~s~~~d~~i~vw~~ 77 (591)
..+|.+.|++++|+|+ +||+|+.|++|++|++.. .....+ .. |...|.+++|+|++++|++++.|++|++|++
T Consensus 10 ~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~ 87 (330)
T 2hes_X 10 LKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAK 87 (330)
T ss_dssp EECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC
T ss_pred eccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEc
Confidence 3589999999999998 999999999999999874 233444 34 9999999999999999999999999999998
Q ss_pred ccc-----CceeeeEEEeeccceEEEEeeCCceEEEEEeCCCcEEEEEeeee----eeeceecccccccccCCCCCCCce
Q psy710 78 RQK-----RPEIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESF----TLSGYIINWNKAIDVCMKTHPGPI 148 (591)
Q Consensus 78 ~~~-----~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 148 (591)
... .......+.+|...|.+++|+|++++|++++.|+.|++||+... +++..+
T Consensus 88 ~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~------------------ 149 (330)
T 2hes_X 88 EESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVL------------------ 149 (330)
T ss_dssp -------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEE------------------
T ss_pred ccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEe------------------
Confidence 642 22456788899999999999999999999999999999999531 111111
Q ss_pred eccCCCCcCcceeeeccCCCCceEEEECCCCCEEEEEeCCCcEEEeCCCCe--EE-EEeccCCCcEEEEEEEcC--CceE
Q psy710 149 IHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGV--DA-HVRHETDAAVIQMQFLTN--EGAL 223 (591)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~--~~-~~~~~~~~~v~~~~~~~~--~~~l 223 (591)
.+|...|.+++|+|++++|++++.|+.|++||.... ++ .....|...|.+++|+|+ +..|
T Consensus 150 ---------------~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l 214 (330)
T 2hes_X 150 ---------------QEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRL 214 (330)
T ss_dssp ---------------CCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEE
T ss_pred ---------------ccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEE
Confidence 367788999999999999999999999999997654 23 344456779999999998 6789
Q ss_pred EEEeCCCcEEEEEccCCCc------ceEEeeee-ccccEEEEEecCCCCEEEEEeCCccEEEEEccCccccceeeehhhh
Q psy710 224 ITATADDSLHLWNFRQKRP------EIVHSLKF-QRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKA 296 (591)
Q Consensus 224 ~~~~~d~~i~~wd~~~~~~------~~~~~~~~-~~~~v~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~ 296 (591)
++++.|++|++||++.... .....+.. |...|.+++|++++ +|++++.||.|++|+..+++...
T Consensus 215 ~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~~~~~-------- 285 (330)
T 2hes_X 215 CSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDGEWKV-------- 285 (330)
T ss_dssp EEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEETTEEEE--------
T ss_pred EEEeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCCCceEE--------
Confidence 9999999999999975421 23444444 88899999999765 78999999999999988763210
Q ss_pred ccccccCCCC-CeEEEecCCC-CCCeEEEEEcCCEEEEEeccc
Q psy710 297 IDVCMKTHPG-PIIHLSDNPL-DPSKLLLAYETGLVVHWDLKL 337 (591)
Q Consensus 297 ~~~~~~~~~~-~v~~~~~sp~-~~~~l~~~~~dg~i~iwd~~~ 337 (591)
......+|.. .|.+++|+|. ++++|++++.||.|++||++.
T Consensus 286 ~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 286 FAKRALCHGVYEINVVKWLELNGKTILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp EEEESCTTTTSCEEEEEEC-----CCEEEEETTSEEEEEEC--
T ss_pred EeccccccccceEEEEEEecCCCceEEEEecCCCcEEEEEecc
Confidence 0123456776 8999999994 478999999999999999864
No 43
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=6.7e-41 Score=320.07 Aligned_cols=291 Identities=14% Similarity=0.202 Sum_probs=250.3
Q ss_pred ceeEeeccCCcceEEEEEeecCCEEEEecCCCeEEEEeecccCceeeeEEEeeccceEEEEeeCCceEEEEEeCCCcEEE
Q psy710 39 VDAHVRHETDAAVIQMQFLTNEGALITATADDSLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHV 118 (591)
Q Consensus 39 ~~~~~~~~h~~~v~~l~~sp~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v 118 (591)
.....+.+|...|.+++|+|++++|++++.|+.|++|++.+++ ....+.+|...|.+++|+|++++|++++.|+.|++
T Consensus 14 ~~~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~--~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~v 91 (312)
T 4ery_A 14 ALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK--FEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKI 91 (312)
T ss_dssp EEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCC--EEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred eeEEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcc--cchhhccCCCceEEEEEcCCCCEEEEECCCCEEEE
Confidence 3445778999999999999999999999999999999998874 67788899999999999999999999999999999
Q ss_pred EEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCCCCEEEEEeCCCcEEEeCCCC
Q psy710 119 VNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPG 198 (591)
Q Consensus 119 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~ 198 (591)
||+.+++....+. +|...|.+++|+|+++++++++.|+.|++||+.+
T Consensus 92 wd~~~~~~~~~~~---------------------------------~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~ 138 (312)
T 4ery_A 92 WDVSSGKCLKTLK---------------------------------GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKT 138 (312)
T ss_dssp EETTTCCEEEEEE---------------------------------CCSSCEEEEEECSSSSEEEEEETTSCEEEEETTT
T ss_pred EECCCCcEEEEEc---------------------------------CCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCC
Confidence 9999877655544 5677789999999999999999999999999987
Q ss_pred eEEEE-eccCCCcEEEEEEEcCCceEEEEeCCCcEEEEEccCCCcceEEee-eeccccEEEEEecCCCCEEEEEeCCccE
Q psy710 199 VDAHV-RHETDAAVIQMQFLTNEGALITATADDSLHLWNFRQKRPEIVHSL-KFQRERITYIHLPLQSKWLYVGTEKGNI 276 (591)
Q Consensus 199 ~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~-~~~~~~v~~~~~sp~~~~l~~~~~dg~i 276 (591)
.+... ...+..+|.+++|+|++++|++++.|+.|++||++++ +.+..+ ..+...+..++|+|+++++++++.|+.|
T Consensus 139 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i 216 (312)
T 4ery_A 139 GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG--QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTL 216 (312)
T ss_dssp CCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTC--CEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEE
T ss_pred CEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCC--ceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeE
Confidence 76554 3445679999999999999999999999999999987 555554 3455789999999999999999999999
Q ss_pred EEEEccCccccceeeehhhhccccccCCCCCeE--EEecCCCCCCeEEEEEcCCEEEEEecccceEEEEec-cCCCeeEE
Q psy710 277 HVVNIESFTLSGYIINWNKAIDVCMKTHPGPII--HLSDNPLDPSKLLLAYETGLVVHWDLKLKRAEFRWQ-CSEPIKSV 353 (591)
Q Consensus 277 ~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~--~~~~sp~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~ 353 (591)
++||+.+++.. ..+.+|..... ...+++.++.+|++++.||.|++||+.+++++..+. |...|.++
T Consensus 217 ~iwd~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~ 285 (312)
T 4ery_A 217 KLWDYSKGKCL-----------KTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVIST 285 (312)
T ss_dssp EEEETTTTEEE-----------EEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCCEEEEECCCSSCEEEE
T ss_pred EEEECCCCcEE-----------EEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCchhhhhhhccCCcEEEE
Confidence 99999987653 24455554322 233443278899999999999999999999887776 89999999
Q ss_pred EEeecCCEEEEEe--cCCcEEEEecC
Q psy710 354 CWHYEGKQFLCSH--TDGTISTWAVR 377 (591)
Q Consensus 354 ~~sp~g~~l~s~~--~dg~i~vwd~~ 377 (591)
+|+|++++|++++ .|+.|++|+.+
T Consensus 286 ~~~p~~~~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 286 ACHPTENIIASAALENDKTIKLWKSD 311 (312)
T ss_dssp EECSSSSEEEEEECTTTCCEEEEECC
T ss_pred eecCcCCceEEEEccCCccEEEecCC
Confidence 9999999999997 69999999975
No 44
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1e-40 Score=333.72 Aligned_cols=332 Identities=12% Similarity=0.139 Sum_probs=265.8
Q ss_pred CcEEEEcCCC-ceeEeeccCCcceEEEEEeecCC-EEEEecCCCeEEEEee----cccCc----eeeeEEEe--------
Q psy710 29 GSLRLLGRPG-VDAHVRHETDAAVIQMQFLTNEG-ALITATADDSLHLWNF----RQKRP----EIVHSLKF-------- 90 (591)
Q Consensus 29 g~i~lw~~~~-~~~~~~~~h~~~v~~l~~sp~~~-~l~s~~~d~~i~vw~~----~~~~~----~~~~~~~~-------- 90 (591)
..+.+|+.+. ........|.+.|.+++|+|+++ +|++++.|+.|++|++ .+++. .....+..
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (425)
T 1r5m_A 25 SIDSSDDLDGFVKILKEIVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASS 104 (425)
T ss_dssp ---------CCCEECEEEEECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC---
T ss_pred cccccccchhhhhheeeeeccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccc
Confidence 3456777653 33334456679999999999999 9999999999999999 76641 02333333
Q ss_pred --eccceEEEEeeCCceEEEEEeCCCcEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCcceeeeccCCC
Q psy710 91 --QRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPY 168 (591)
Q Consensus 91 --~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (591)
|...|.+++|+|++++|++++.|+.|++|| .+++....+. +|..
T Consensus 105 ~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~-~~~~~~~~~~---------------------------------~~~~ 150 (425)
T 1r5m_A 105 GKTTNQVTCLAWSHDGNSIVTGVENGELRLWN-KTGALLNVLN---------------------------------FHRA 150 (425)
T ss_dssp ---CBCEEEEEECTTSSEEEEEETTSCEEEEE-TTSCEEEEEC---------------------------------CCCS
T ss_pred cCCCCceEEEEEcCCCCEEEEEeCCCeEEEEe-CCCCeeeecc---------------------------------CCCc
Confidence 677999999999999999999999999999 4444333332 5678
Q ss_pred CceEEEECCCCCEEEEEeCCCcEEEeCCCCeEEEEeccC-CCc---------------EEEEEEEcCCceEEEEeCCCcE
Q psy710 169 QPTAIAFDPIQKLLAIGTKTGSLRLLGRPGVDAHVRHET-DAA---------------VIQMQFLTNEGALITATADDSL 232 (591)
Q Consensus 169 ~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-~~~---------------v~~~~~~~~~~~l~~~~~d~~i 232 (591)
.|.+++|+|++++|++++.||.|++||+.+.+....... ... +.++.|++++ .+++++.++.|
T Consensus 151 ~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~i 229 (425)
T 1r5m_A 151 PIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDD-KFVIPGPKGAI 229 (425)
T ss_dssp CEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEETT-EEEEECGGGCE
T ss_pred cEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCC-EEEEEcCCCeE
Confidence 899999999999999999999999999988776644332 223 8999999885 58889999999
Q ss_pred EEEEccCCCcceEEeeeeccccEEEEEecCCCCEEEEEeCCccEEEEEccCccccceeeehhhhccccccCCCCCeEEEe
Q psy710 233 HLWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLS 312 (591)
Q Consensus 233 ~~wd~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 312 (591)
++||+++. +.+..+..|...|.+++|+|++++|++++.|+.|++||+.+.+. ...+..|...|.+++
T Consensus 230 ~~~d~~~~--~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~-----------~~~~~~~~~~i~~~~ 296 (425)
T 1r5m_A 230 FVYQITEK--TPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNS-----------QNCFYGHSQSIVSAS 296 (425)
T ss_dssp EEEETTCS--SCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSC-----------SEEECCCSSCEEEEE
T ss_pred EEEEcCCC--ceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCcc-----------ceEecCCCccEEEEE
Confidence 99999987 66777888999999999999999999999999999999998765 335677999999999
Q ss_pred cCCCCCCeEEEEEcCCEEEEEecccceEEEEec-cCCCeeEEEEeecCCEEEEEecCCcEEEEecCCCCC----------
Q psy710 313 DNPLDPSKLLLAYETGLVVHWDLKLKRAEFRWQ-CSEPIKSVCWHYEGKQFLCSHTDGTISTWAVRPLAK---------- 381 (591)
Q Consensus 313 ~sp~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp~g~~l~s~~~dg~i~vwd~~~~~~---------- 381 (591)
|+| ++ ++++++.|+.|++||+.+++....+. |...|.+++|+|++++|++++.||.|++||+. .++
T Consensus 297 ~~~-~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~-~~~~~~~~~~~~~ 373 (425)
T 1r5m_A 297 WVG-DD-KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAFMDGQVNVYDLK-KLNSKSRSLYGNR 373 (425)
T ss_dssp EET-TT-EEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEETTSCEEEEECH-HHHC---------
T ss_pred ECC-CC-EEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEECCCeEEEEECC-CCccceeeeeccc
Confidence 999 88 99999999999999999998887776 78899999999999999999999999999998 555
Q ss_pred ----------ceeeecccccccCCCCCCCCC--cceEEEEeecCCCCcEEEEECCcc
Q psy710 382 ----------PVSVNQPHIKTNKDGKLEQCK--PIQKVEWKHSRSGEGFVIFSGGLT 426 (591)
Q Consensus 382 ----------~~~~~~~~~~~~~~~~~~~~~--~i~~~~~~~~~~~~~~~l~~g~~~ 426 (591)
++..+..| .. +|.+++|+| ++.+|++++.+
T Consensus 374 ~~~~~~~~~~~~~~~~~~-----------~~~~~v~~~~~s~----~~~~l~~~~~d 415 (425)
T 1r5m_A 374 DGILNPLPIPLYASYQSS-----------QDNDYIFDLSWNC----AGNKISVAYSL 415 (425)
T ss_dssp -----CEECCEEEEECCT-----------TCCCCEEEEEECT----TSSEEEEEESS
T ss_pred ccccCcccchhhhhhcCc-----------ccCCceEEEEccC----CCceEEEEecC
Confidence 66777777 45 999999987 44567777644
No 45
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=8.8e-40 Score=328.68 Aligned_cols=317 Identities=15% Similarity=0.201 Sum_probs=273.7
Q ss_pred ccCCCCCCcEEEeCCCCcEEEEEeCCCcEEEEcCC-CceeEeeccCCcceEEEEEeecCCEEEEecCCCeEEEEeecccC
Q psy710 3 RHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRP-GVDAHVRHETDAAVIQMQFLTNEGALITATADDSLHLWNFRQKR 81 (591)
Q Consensus 3 ~~gh~~~v~~~~~spdg~~la~g~~dg~i~lw~~~-~~~~~~~~~h~~~v~~l~~sp~~~~l~s~~~d~~i~vw~~~~~~ 81 (591)
..||.+.|.. +++++|++|++|+.||.|++||+. +.....+.+|...|.+++|+ +++|++++.|++|++||+.++
T Consensus 114 l~~h~~~v~~-~~~~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~- 189 (445)
T 2ovr_B 114 LKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETG- 189 (445)
T ss_dssp EECSTTSCEE-EEEEETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTT-
T ss_pred ecccCCCcEE-EEEEcCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcC-
Confidence 3589887643 355678999999999999999987 77788899999999999998 569999999999999999987
Q ss_pred ceeeeEEEeeccceEEEEeeCCceEEEEEeCCCcEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCccee
Q psy710 82 PEIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKT 161 (591)
Q Consensus 82 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (591)
+.+..+.+|...|.+++|+ ++.+++++.|+.|++||+.+++....+.
T Consensus 190 -~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~~~~------------------------------ 236 (445)
T 2ovr_B 190 -ECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLM------------------------------ 236 (445)
T ss_dssp -EEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCEEEEEE------------------------------
T ss_pred -cEEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCcEEEEEc------------------------------
Confidence 4788899999999999995 5679999999999999999877665544
Q ss_pred eeccCCCCceEEEECCCCCEEEEEeCCCcEEEeCCCCeEEEEec-cCCCcEEEEEEEcCCceEEEEeCCCcEEEEEccCC
Q psy710 162 FRHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGVDAHVRH-ETDAAVIQMQFLTNEGALITATADDSLHLWNFRQK 240 (591)
Q Consensus 162 ~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~ 240 (591)
+|...+.++++ +++++++++.||.|++||..+.+..... .+...+.++.| +++++++++.|+.|++||++++
T Consensus 237 ---~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~ 309 (445)
T 2ovr_B 237 ---GHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETG 309 (445)
T ss_dssp ---CCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTC
T ss_pred ---CCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCC
Confidence 56677899999 6788999999999999999877766443 45678999999 8889999999999999999988
Q ss_pred CcceEEeeeeccccEEEEEecCCCCEEEEEeCCccEEEEEccCccccceeeehhhhccccccCCCCCeEEEecCCCCCCe
Q psy710 241 RPEIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSK 320 (591)
Q Consensus 241 ~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~ 320 (591)
+.+..+.+|...+.++.+ +++++++++.||.|++||+.+++.... ......|...|.+++|++ ++
T Consensus 310 --~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~--------~~~~~~~~~~v~~~~~~~---~~ 374 (445)
T 2ovr_B 310 --NCIHTLTGHQSLTSGMEL--KDNILVSGNADSTVKIWDIKTGQCLQT--------LQGPNKHQSAVTCLQFNK---NF 374 (445)
T ss_dssp --CEEEEECCCCSCEEEEEE--ETTEEEEEETTSCEEEEETTTCCEEEE--------ECSTTSCSSCEEEEEECS---SE
T ss_pred --CEEEEEcCCcccEEEEEE--eCCEEEEEeCCCeEEEEECCCCcEEEE--------EccCCCCCCCEEEEEECC---CE
Confidence 788889999899998887 567999999999999999988765310 111234889999999966 89
Q ss_pred EEEEEcCCEEEEEecccceEEEEe------ccCCCeeEEEEeecCCEEEEEecCCc----EEEEecCC
Q psy710 321 LLLAYETGLVVHWDLKLKRAEFRW------QCSEPIKSVCWHYEGKQFLCSHTDGT----ISTWAVRP 378 (591)
Q Consensus 321 l~~~~~dg~i~iwd~~~~~~~~~~------~~~~~v~~~~~sp~g~~l~s~~~dg~----i~vwd~~~ 378 (591)
|++++.||.|++||+.+++.+..+ .+...|.+++|+|++.+|++++.||+ |.+||++.
T Consensus 375 l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df~~ 442 (445)
T 2ovr_B 375 VITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDV 442 (445)
T ss_dssp EEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCC
T ss_pred EEEEeCCCeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCCCCccEEEEEECCC
Confidence 999999999999999999988777 47889999999999999999999998 99999983
No 46
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=8.6e-40 Score=316.69 Aligned_cols=290 Identities=14% Similarity=0.234 Sum_probs=246.5
Q ss_pred eEeeccCCcceEEEEEeec-CCEEEEecCCCeEEEEeecccCc---eeeeEEEeeccceEEEEeeCCceEEEEEeCCCcE
Q psy710 41 AHVRHETDAAVIQMQFLTN-EGALITATADDSLHLWNFRQKRP---EIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNI 116 (591)
Q Consensus 41 ~~~~~~h~~~v~~l~~sp~-~~~l~s~~~d~~i~vw~~~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i 116 (591)
..++++|.+.|++++|+|+ +++|+||+.|++|++||+...+. .....+.+|...|.+++|+|++++|++++.|+.|
T Consensus 31 ~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i 110 (340)
T 4aow_A 31 RGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTL 110 (340)
T ss_dssp EEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred EEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccc
Confidence 3478999999999999998 58999999999999999986542 3566788999999999999999999999999999
Q ss_pred EEEEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCCCCEEEEEeCCCcEEEeCC
Q psy710 117 HVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGR 196 (591)
Q Consensus 117 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~ 196 (591)
++|+........... .+...+....++++++++++++.|+.+++||.
T Consensus 111 ~~~~~~~~~~~~~~~---------------------------------~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~ 157 (340)
T 4aow_A 111 RLWDLTTGTTTRRFV---------------------------------GHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNT 157 (340)
T ss_dssp EEEETTTTEEEEEEE---------------------------------CCSSCEEEEEECTTSSCEEEEETTSCEEEECT
T ss_pred eEEeecccceeeeec---------------------------------CCCCceeEEEEeecCccceeecCCCeEEEEEe
Confidence 999998765444333 34455688899999999999999999999998
Q ss_pred CCeEEEE--eccCCCcEEEEEEEcCC--ceEEEEeCCCcEEEEEccCCCcceEEeeeeccccEEEEEecCCCCEEEEEeC
Q psy710 197 PGVDAHV--RHETDAAVIQMQFLTNE--GALITATADDSLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGTE 272 (591)
Q Consensus 197 ~~~~~~~--~~~~~~~v~~~~~~~~~--~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~ 272 (591)
....... ...+...+..++|++++ .++++++.|+.|++||+++. +.+..+.+|...|++++|+|++++|++|+.
T Consensus 158 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~--~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~ 235 (340)
T 4aow_A 158 LGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANC--KLKTNHIGHTGYLNTVTVSPDGSLCASGGK 235 (340)
T ss_dssp TSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTT--EEEEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred CCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCC--ceeeEecCCCCcEEEEEECCCCCEEEEEeC
Confidence 7765543 33446789999998865 46789999999999999988 788889999999999999999999999999
Q ss_pred CccEEEEEccCccccceeeehhhhccccccCCCCCeEEEecCCCCCCeEEEEEcCCEEEEEecccceEEEEec-------
Q psy710 273 KGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKLLLAYETGLVVHWDLKLKRAEFRWQ------- 345 (591)
Q Consensus 273 dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~------- 345 (591)
|+.|++||+.+.+.. ..+ .+...+.++.|+| ++ .+++++.|+.|++||++++.....+.
T Consensus 236 Dg~i~iwd~~~~~~~-----------~~~-~~~~~v~~~~~~~-~~-~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~ 301 (340)
T 4aow_A 236 DGQAMLWDLNEGKHL-----------YTL-DGGDIINALCFSP-NR-YWLCAATGPSIKIWDLEGKIIVDELKQEVISTS 301 (340)
T ss_dssp TCEEEEEETTTTEEE-----------EEE-ECSSCEEEEEECS-SS-SEEEEEETTEEEEEETTTTEEEEEECCC-----
T ss_pred CCeEEEEEeccCcee-----------eee-cCCceEEeeecCC-CC-ceeeccCCCEEEEEECCCCeEEEeccccceeee
Confidence 999999999987663 122 3456899999999 65 55667789999999999887765543
Q ss_pred ---cCCCeeEEEEeecCCEEEEEecCCcEEEEecCCCC
Q psy710 346 ---CSEPIKSVCWHYEGKQFLCSHTDGTISTWAVRPLA 380 (591)
Q Consensus 346 ---~~~~v~~~~~sp~g~~l~s~~~dg~i~vwd~~~~~ 380 (591)
|...|++++|+|+|++|++|+.||.|+|||++ +|
T Consensus 302 ~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~-tG 338 (340)
T 4aow_A 302 SKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVT-IG 338 (340)
T ss_dssp --CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEE-C-
T ss_pred ccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCC-Cc
Confidence 67899999999999999999999999999998 44
No 47
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-41 Score=343.79 Aligned_cols=323 Identities=12% Similarity=0.113 Sum_probs=242.0
Q ss_pred CCCCCcEEEeCCCC---------cEEEEE-------------------eCCCcEEEEcCCCcee-----EeeccCCcceE
Q psy710 6 FPYQPTAIAFDPIQ---------KLLAIG-------------------TKTGSLRLLGRPGVDA-----HVRHETDAAVI 52 (591)
Q Consensus 6 h~~~v~~~~~spdg---------~~la~g-------------------~~dg~i~lw~~~~~~~-----~~~~~h~~~v~ 52 (591)
+.+.|.+|+|+|++ ++||+| +.|++|+||+++.... ..+..|.+.|.
T Consensus 132 ~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~ 211 (524)
T 2j04_B 132 VGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVW 211 (524)
T ss_dssp CCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCEEEEEEEEECCCSEE
T ss_pred CCCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCceEEEEEEecCCcEE
Confidence 56788999999886 677764 4678999999864322 34667889999
Q ss_pred EEEEeec------CCEEEEecCCCeEEEEeecccCce---------eeeEEEeeccceEEEEeeCCceEEEEEeCCCcEE
Q psy710 53 QMQFLTN------EGALITATADDSLHLWNFRQKRPE---------IVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIH 117 (591)
Q Consensus 53 ~l~~sp~------~~~l~s~~~d~~i~vw~~~~~~~~---------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~ 117 (591)
+++|+|+ +.+||+++.|++|++||+..++.. ....+.+|...|.+++|++++ .|++|+.||+|+
T Consensus 212 ~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~-~lasgs~DgtV~ 290 (524)
T 2j04_B 212 DLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPT-TVVCGFKNGFVA 290 (524)
T ss_dssp EEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSS-EEEEEETTSEEE
T ss_pred EEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCC-eEEEEeCCCEEE
Confidence 9999997 579999999999999999865311 234677899999999999864 799999999999
Q ss_pred EEEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEE--EECCCC-CEEEEEeCCCcEEEe
Q psy710 118 VVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAI--AFDPIQ-KLLAIGTKTGSLRLL 194 (591)
Q Consensus 118 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~-~~l~~~~~dg~i~i~ 194 (591)
+||+++++... .. ..+|...|.++ +|+|++ ++||+++.|++|++|
T Consensus 291 lWD~~~~~~~~-------------------------------~~-~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklW 338 (524)
T 2j04_B 291 EFDLTDPEVPS-------------------------------FY-DQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIF 338 (524)
T ss_dssp EEETTBCSSCS-------------------------------EE-EECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEE
T ss_pred EEECCCCCCce-------------------------------EE-eecccccEEEEEEEcCCCCCeEEEEeccCCeEEEE
Confidence 99998643111 11 13678889999 578887 899999999999999
Q ss_pred CCCCeEE---EEeccCCCcEEEEEEEcCCceEEEEeCCCcEEEEEccCCCcceEEeeeeccccEEEEEecCCCCEEEEEe
Q psy710 195 GRPGVDA---HVRHETDAAVIQMQFLTNEGALITATADDSLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGT 271 (591)
Q Consensus 195 d~~~~~~---~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~ 271 (591)
|+.+.+. ...+.....|.+++|+|+++.|++++.|++|++||+++. .++..+.+|.+.|++++|+|++++|++|+
T Consensus 339 D~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~--~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs 416 (524)
T 2j04_B 339 NPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAA--FAVHPLVSRETTITAIGVSRLHPMVLAGS 416 (524)
T ss_dssp CGGGHHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCT--TCCEEEEECSSCEEEEECCSSCCBCEEEE
T ss_pred ECCCCCcccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECccc--ccceeeecCCCceEEEEeCCCCCeEEEEE
Confidence 9976543 222322235889999999999999999999999999987 66677889999999999999999999999
Q ss_pred CCccEEEEEccCccccceeeehhhhcccccc-----CCCCCeEEEecCCCCCCeEEEEEcCCEEEEEecccceEEEEecc
Q psy710 272 EKGNIHVVNIESFTLSGYIINWNKAIDVCMK-----THPGPIIHLSDNPLDPSKLLLAYETGLVVHWDLKLKRAEFRWQC 346 (591)
Q Consensus 272 ~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~-----~~~~~v~~~~~sp~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 346 (591)
.|++|++||+...... ... .+...+.+++|+| +++.+. ...+..+..|+.....+.....|
T Consensus 417 ~Dgtv~lwd~~~~~~~------------~~~~~~~~~~~~~v~~v~~sp-~g~~~~-~~~~~~~~~~~~~g~~~~~l~gh 482 (524)
T 2j04_B 417 ADGSLIITNAARRLLH------------GIKNSSATQKSLRLWKWDYSI-KDDKYR-IDSSYEVYPLTVNDVSKAKIDAH 482 (524)
T ss_dssp TTTEEECCBSCSSTTT------------CC------CCCCEEEECBCCS-SSCEEE-ECCCCCCCC-------------C
T ss_pred CCCEEEEEechHhhcc------------ccccCccceeeeEEEEeccCC-CCCeEE-ccCCceecccccCCcceeeecCC
Confidence 9999999998654221 111 1122578999999 888542 22222222233223334445559
Q ss_pred CCCeeEEEEeecCC---EEEEEecCCcEEEEecC
Q psy710 347 SEPIKSVCWHYEGK---QFLCSHTDGTISTWAVR 377 (591)
Q Consensus 347 ~~~v~~~~~sp~g~---~l~s~~~dg~i~vwd~~ 377 (591)
...|.+++|+|+++ .+|+|+.||.|+||++.
T Consensus 483 ~~~V~~Vafsp~~~~~~~lAsg~~~g~vrlw~l~ 516 (524)
T 2j04_B 483 GINITCTKWNETSAGGKCYAFSNSAGLLTLEYLS 516 (524)
T ss_dssp CCSCCCEEECCSTTTTTEEEEECTTSEEEEEECS
T ss_pred CceEEEEECCCCCCccHHHHhhccCceEEEEEcc
Confidence 99999999999964 99999999999999998
No 48
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=1.2e-39 Score=315.28 Aligned_cols=283 Identities=11% Similarity=0.144 Sum_probs=250.5
Q ss_pred cCCCCCCcEEEeCCCCcEEEEEeCCCcEEEEcCCCc----eeEeec--cCCcceEEEEEeecCCEEEEecCCCeEEEEee
Q psy710 4 HGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGV----DAHVRH--ETDAAVIQMQFLTNEGALITATADDSLHLWNF 77 (591)
Q Consensus 4 ~gh~~~v~~~~~spdg~~la~g~~dg~i~lw~~~~~----~~~~~~--~h~~~v~~l~~sp~~~~l~s~~~d~~i~vw~~ 77 (591)
.+|...|++++|+|++++|++++ ||.|++|++... ....+. .|...|.+++|+|++++|++++.|+.|++||+
T Consensus 48 ~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~ 126 (337)
T 1gxr_A 48 LNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDL 126 (337)
T ss_dssp ECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEEC
T ss_pred ccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEEC
Confidence 47999999999999999999998 999999998732 233333 78999999999999999999999999999999
Q ss_pred cccCceeeeEEEeeccceEEEEeeCCceEEEEEeCCCcEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCCCcC
Q psy710 78 RQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLD 157 (591)
Q Consensus 78 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (591)
.+++......+..|...|.+++|+|+++.+++++.|+.|++||+.+++....+.
T Consensus 127 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~-------------------------- 180 (337)
T 1gxr_A 127 AAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQ-------------------------- 180 (337)
T ss_dssp CCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC--------------------------
T ss_pred CCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeee--------------------------
Confidence 988655677888899999999999999999999999999999999877655543
Q ss_pred cceeeeccCCCCceEEEECCCCCEEEEEeCCCcEEEeCCCCeEEEEeccCCCcEEEEEEEcCCceEEEEeCCCcEEEEEc
Q psy710 158 PSKTFRHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGVDAHVRHETDAAVIQMQFLTNEGALITATADDSLHLWNF 237 (591)
Q Consensus 158 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~ 237 (591)
+|...+.+++|+|+++++++++.||.|++||+.+.+......+...+.+++|+|++++|++++.++.|++||+
T Consensus 181 -------~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~ 253 (337)
T 1gxr_A 181 -------GHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHV 253 (337)
T ss_dssp -------CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred -------cccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeecCCCceEEEEECCCCCEEEEEcCCCcEEEEEC
Confidence 4667789999999999999999999999999998888777777789999999999999999999999999999
Q ss_pred cCCCcceEEeeeeccccEEEEEecCCCCEEEEEeCCccEEEEEccCccccceeeehhhhccccccCCCCCeEEEecCCCC
Q psy710 238 RQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLD 317 (591)
Q Consensus 238 ~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~ 317 (591)
++. + ...+..|...+.+++|+|+++++++++.||.|++||+.+++.. ....|...+.+++|+| +
T Consensus 254 ~~~--~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~------------~~~~~~~~v~~~~~s~-~ 317 (337)
T 1gxr_A 254 NKP--D-KYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASI------------FQSKESSSVLSCDISV-D 317 (337)
T ss_dssp TSS--C-EEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEE------------EEEECSSCEEEEEECT-T
T ss_pred CCC--C-eEEEcCCccceeEEEECCCCCEEEEecCCCcEEEEECCCCeEE------------EEecCCCcEEEEEECC-C
Confidence 987 3 3456778899999999999999999999999999999987653 2345788999999999 9
Q ss_pred CCeEEEEEcCCEEEEEecc
Q psy710 318 PSKLLLAYETGLVVHWDLK 336 (591)
Q Consensus 318 ~~~l~~~~~dg~i~iwd~~ 336 (591)
+++|++++.||.|++||+.
T Consensus 318 ~~~l~~~~~dg~i~iw~~~ 336 (337)
T 1gxr_A 318 DKYIVTGSGDKKATVYEVI 336 (337)
T ss_dssp SCEEEEEETTSCEEEEEEE
T ss_pred CCEEEEecCCCeEEEEEEe
Confidence 9999999999999999973
No 49
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=9.5e-40 Score=320.64 Aligned_cols=305 Identities=14% Similarity=0.122 Sum_probs=250.8
Q ss_pred ccCCCCCCcEEEeCCCCcEEEEEeCCCcEEEEcCCCc---eeEeeccCCcceEEEEEeecCCEEEEecCCCeEEEEeecc
Q psy710 3 RHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGV---DAHVRHETDAAVIQMQFLTNEGALITATADDSLHLWNFRQ 79 (591)
Q Consensus 3 ~~gh~~~v~~~~~spdg~~la~g~~dg~i~lw~~~~~---~~~~~~~h~~~v~~l~~sp~~~~l~s~~~d~~i~vw~~~~ 79 (591)
...|.++|++++|+|+|++||+|+.|+.|++||+... ....+.+|...|.+++|+|++++|++++.|+.|++||+.+
T Consensus 4 ~~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~ 83 (372)
T 1k8k_C 4 HSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKG 83 (372)
T ss_dssp EESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEET
T ss_pred ecccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCC
Confidence 4569999999999999999999999999999998854 6778889999999999999999999999999999999988
Q ss_pred cCceeeeEEEeeccceEEEEeeCCceEEEEEeCCCcEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCcc
Q psy710 80 KRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPS 159 (591)
Q Consensus 80 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (591)
++......+..|...|.+++|+|++++|++++.|+.|++||+..++... ..
T Consensus 84 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~-----------------------------~~ 134 (372)
T 1k8k_C 84 RTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWW-----------------------------VC 134 (372)
T ss_dssp TEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEE-----------------------------EE
T ss_pred CeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcce-----------------------------ee
Confidence 7533344556788999999999999999999999999999998744111 11
Q ss_pred eeeeccCCCCceEEEECCCCCEEEEEeCCCcEEEeCCC------------------CeEEE-EeccCCCcEEEEEEEcCC
Q psy710 160 KTFRHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRP------------------GVDAH-VRHETDAAVIQMQFLTNE 220 (591)
Q Consensus 160 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~------------------~~~~~-~~~~~~~~v~~~~~~~~~ 220 (591)
..+..+|...|.+++|+|+++++++++.||.|++||+. ..+.. ....+...+.+++|+|++
T Consensus 135 ~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 214 (372)
T 1k8k_C 135 KHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANG 214 (372)
T ss_dssp EEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSS
T ss_pred eeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCC
Confidence 11223567889999999999999999999999999953 33444 333567799999999999
Q ss_pred ceEEEEeCCCcEEEEEccCCCcceEEeeeeccccEEEEEecCCCCEEEEEeCCccEEEEEccC--cccc--cee------
Q psy710 221 GALITATADDSLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIES--FTLS--GYI------ 290 (591)
Q Consensus 221 ~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~i~d~~~--~~~~--~~~------ 290 (591)
++|++++.|+.|++||++++ +.+..+..|...|.+++|+|++++++++ .|+.|++|++.+ ++.. ...
T Consensus 215 ~~l~~~~~d~~i~i~d~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~ 291 (372)
T 1k8k_C 215 SRVAWVSHDSTVCLADADKK--MAVATLASETLPLLAVTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQS 291 (372)
T ss_dssp SEEEEEETTTEEEEEEGGGT--TEEEEEECSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC---
T ss_pred CEEEEEeCCCEEEEEECCCC--ceeEEEccCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccCcCceEEEeeccCccccc
Confidence 99999999999999999988 7888899998999999999999988887 899999999988 4210 000
Q ss_pred --------eeh-----hhhc-------cccccCCCCCeEEEecCCCCC---CeEEEEEcCCEEEEEecccce
Q psy710 291 --------INW-----NKAI-------DVCMKTHPGPIIHLSDNPLDP---SKLLLAYETGLVVHWDLKLKR 339 (591)
Q Consensus 291 --------~~~-----~~~~-------~~~~~~~~~~v~~~~~sp~~~---~~l~~~~~dg~i~iwd~~~~~ 339 (591)
..| .... .....+|...|++++|++.++ ++|++++.||.|++||+.+++
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~~~~ 363 (372)
T 1k8k_C 292 SQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSLE 363 (372)
T ss_dssp -----CHHHHHHHCCCCC---------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHHHH
T ss_pred hhhhcchhhhhhhcccccccccCccccccccccccCCcceeEEecCCCcceeeEEEecCCCceEEEEecChh
Confidence 000 0000 112258999999999775376 899999999999999997643
No 50
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-38 Score=311.96 Aligned_cols=297 Identities=14% Similarity=0.184 Sum_probs=255.0
Q ss_pred ccCCCCCCcEEEeCCCCcEEEEEeCCCcEEEEcCC-CceeEeeccCCcceEEEEEeecCCEEEEecCCCeEEEEeecccC
Q psy710 3 RHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRP-GVDAHVRHETDAAVIQMQFLTNEGALITATADDSLHLWNFRQKR 81 (591)
Q Consensus 3 ~~gh~~~v~~~~~spdg~~la~g~~dg~i~lw~~~-~~~~~~~~~h~~~v~~l~~sp~~~~l~s~~~d~~i~vw~~~~~~ 81 (591)
..||.+.|++++|+|+|++||+|+.||.|++||+. +.....+.+|...|.+++|+|++++|++++.|+.|++||+.+++
T Consensus 28 l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~ 107 (369)
T 3zwl_B 28 LTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQ 107 (369)
T ss_dssp EECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCC
T ss_pred EEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc
Confidence 36899999999999999999999999999999987 67788899999999999999999999999999999999999885
Q ss_pred ceeeeEEEeeccceEEEEeeCCceEEEEEeCC-----CcEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCCCc
Q psy710 82 PEIVHSLKFQRERITYIHLPLQSKWLYVGTEK-----GNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPL 156 (591)
Q Consensus 82 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (591)
.+..+. +...+.+++|+|+++.+++++.+ +.|++||+........+.
T Consensus 108 --~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~------------------------- 159 (369)
T 3zwl_B 108 --CVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELT------------------------- 159 (369)
T ss_dssp --EEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEE-------------------------
T ss_pred --EEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeec-------------------------
Confidence 566666 88899999999999999999998 999999998743111100
Q ss_pred CcceeeeccCCCCceEEEECCCCCEEEEEeCCCcEEEeCCCCeEEEEeccCCCcEEEEEEEcCCceEEEEeCCCcEEEEE
Q psy710 157 DPSKTFRHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGVDAHVRHETDAAVIQMQFLTNEGALITATADDSLHLWN 236 (591)
Q Consensus 157 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd 236 (591)
............+.....+.+++|+|++++|++++.|+.|++||
T Consensus 160 ------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d 203 (369)
T 3zwl_B 160 ------------------------------------KVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYD 203 (369)
T ss_dssp ------------------------------------EECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEE
T ss_pred ------------------------------------ccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEE
Confidence 00001111122222234899999999999999999999999999
Q ss_pred ccCCCcceEEeeeeccccEEEEEecCCCCEEEEEeCCccEEEEEccCccccceeeehhhhccccccCCCCCeEEEecCCC
Q psy710 237 FRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPL 316 (591)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~ 316 (591)
+++.. ..+..+..|...|.+++|+|++++|++++.|+.|++||+.+++... .+ .+...+..++|+|
T Consensus 204 ~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~-----------~~-~~~~~~~~~~~~~- 269 (369)
T 3zwl_B 204 VSNNY-EYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLK-----------KY-ETDCPLNTAVITP- 269 (369)
T ss_dssp TTTTT-EEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEE-----------EE-ECSSCEEEEEECS-
T ss_pred CCCCc-EeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceee-----------ee-cCCCCceeEEecC-
Confidence 99832 6788888899999999999999999999999999999999876631 22 2678899999999
Q ss_pred CCCeEEEEEcCC--------------EEEEEecccceEEEEec-cCCCeeEEEEeecCCEEEEEecCCcEEEEecC
Q psy710 317 DPSKLLLAYETG--------------LVVHWDLKLKRAEFRWQ-CSEPIKSVCWHYEGKQFLCSHTDGTISTWAVR 377 (591)
Q Consensus 317 ~~~~l~~~~~dg--------------~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp~g~~l~s~~~dg~i~vwd~~ 377 (591)
+++++++++.++ .+++||..+++....+. |...|++++|+|++++|++++.||.|++|+++
T Consensus 270 ~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~ 345 (369)
T 3zwl_B 270 LKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQGTSYASGGEDGFIRLHHFE 345 (369)
T ss_dssp SSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEEEC
T ss_pred CCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEECCCCCEEEEEcCCCeEEEEECc
Confidence 999999999988 89999999998887776 89999999999999999999999999999998
No 51
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=5.7e-39 Score=310.92 Aligned_cols=296 Identities=11% Similarity=0.179 Sum_probs=243.6
Q ss_pred ccCCCCCCcEEEeCCC-CcEEEEEeCCCcEEEEcCCC------ceeEeeccCCcceEEEEEeecCCEEEEecCCCeEEEE
Q psy710 3 RHGFPYQPTAIAFDPI-QKLLAIGTKTGSLRLLGRPG------VDAHVRHETDAAVIQMQFLTNEGALITATADDSLHLW 75 (591)
Q Consensus 3 ~~gh~~~v~~~~~spd-g~~la~g~~dg~i~lw~~~~------~~~~~~~~h~~~v~~l~~sp~~~~l~s~~~d~~i~vw 75 (591)
..||.+.|++|+|+|+ +++||+|+.||+|+|||+.. .....+.+|...|.+++|+|++++|++++.|+.|++|
T Consensus 34 L~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~ 113 (340)
T 4aow_A 34 LKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLW 113 (340)
T ss_dssp ECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred ECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccceEE
Confidence 3589999999999998 68999999999999999762 2456788999999999999999999999999999999
Q ss_pred eecccCceeeeEEEeeccceEEEEeeCCceEEEEEeCCCcEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCCC
Q psy710 76 NFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNP 155 (591)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (591)
+.... ........+...+..+.++++++.|++++.|+.+++||...........
T Consensus 114 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~------------------------ 167 (340)
T 4aow_A 114 DLTTG--TTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQD------------------------ 167 (340)
T ss_dssp ETTTT--EEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECS------------------------
T ss_pred eeccc--ceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEe------------------------
Confidence 99877 4566677788889999999999999999999999999987643222111
Q ss_pred cCcceeeeccCCCCceEEEECCCC--CEEEEEeCCCcEEEeCCCCeEEEEe-ccCCCcEEEEEEEcCCceEEEEeCCCcE
Q psy710 156 LDPSKTFRHGFPYQPTAIAFDPIQ--KLLAIGTKTGSLRLLGRPGVDAHVR-HETDAAVIQMQFLTNEGALITATADDSL 232 (591)
Q Consensus 156 ~~~~~~~~~~~~~~v~~~~~~~~~--~~l~~~~~dg~i~i~d~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i 232 (591)
.+|...+..++|++++ .++++++.|+.|++||....+.... ..+...|.+++|+|++++|++++.|+.|
T Consensus 168 --------~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i 239 (340)
T 4aow_A 168 --------ESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQA 239 (340)
T ss_dssp --------SSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEE
T ss_pred --------ccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeE
Confidence 3567788999998864 5788999999999999998776644 4457799999999999999999999999
Q ss_pred EEEEccCCCcceEEeeeeccccEEEEEecCCCCEEEEEeCCccEEEEEccCccccceeeehhhhccccccCCCCCeEEEe
Q psy710 233 HLWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLS 312 (591)
Q Consensus 233 ~~wd~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 312 (591)
++||+++. +.+..+..+ ..+.++.|+|++.++ +++.|+.|++||+++......... .........|...|++++
T Consensus 240 ~iwd~~~~--~~~~~~~~~-~~v~~~~~~~~~~~~-~~~~d~~i~iwd~~~~~~~~~~~~--~~~~~~~~~h~~~v~~l~ 313 (340)
T 4aow_A 240 MLWDLNEG--KHLYTLDGG-DIINALCFSPNRYWL-CAATGPSIKIWDLEGKIIVDELKQ--EVISTSSKAEPPQCTSLA 313 (340)
T ss_dssp EEEETTTT--EEEEEEECS-SCEEEEEECSSSSEE-EEEETTEEEEEETTTTEEEEEECC--C-------CCCCCEEEEE
T ss_pred EEEEeccC--ceeeeecCC-ceEEeeecCCCCcee-eccCCCEEEEEECCCCeEEEeccc--cceeeeccCCCCCEEEEE
Confidence 99999988 677777765 789999999988755 456799999999987655321110 111224567899999999
Q ss_pred cCCCCCCeEEEEEcCCEEEEEecccce
Q psy710 313 DNPLDPSKLLLAYETGLVVHWDLKLKR 339 (591)
Q Consensus 313 ~sp~~~~~l~~~~~dg~i~iwd~~~~~ 339 (591)
|+| ++++|++|+.||.|+|||+++|.
T Consensus 314 ~s~-dg~~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 314 WSA-DGQTLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp ECT-TSSEEEEEETTSCEEEEEEEC--
T ss_pred ECC-CCCEEEEEeCCCEEEEEeCCCcC
Confidence 999 99999999999999999999875
No 52
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.9e-40 Score=330.87 Aligned_cols=328 Identities=13% Similarity=0.202 Sum_probs=263.5
Q ss_pred cceEEEEEeecCC-EEEEe----------cCCCeEEEEeecccCce-eeeEEEeeccceEEEEeeCCceEEEEEeCCCcE
Q psy710 49 AAVIQMQFLTNEG-ALITA----------TADDSLHLWNFRQKRPE-IVHSLKFQRERITYIHLPLQSKWLYVGTEKGNI 116 (591)
Q Consensus 49 ~~v~~l~~sp~~~-~l~s~----------~~d~~i~vw~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i 116 (591)
..|.+++|+|+++ +|+++ +.|+.|++||+.+++.. .+..+ .|...|.+++|+|++++|++++.|+.|
T Consensus 13 ~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~dg~v 91 (416)
T 2pm9_A 13 SRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASL-QVDSKFNDLDWSHNNKIIAGALDNGSL 91 (416)
T ss_dssp EESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCC-CCSSCEEEEEECSSSSCEEEEESSSCE
T ss_pred hhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEE-ecCCceEEEEECCCCCeEEEEccCCeE
Confidence 4688899999987 89999 88999999999876421 23333 578899999999999999999999999
Q ss_pred EEEEeeee----eeeceecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCC-CCEEEEEeCCCcE
Q psy710 117 HVVNIESF----TLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPI-QKLLAIGTKTGSL 191 (591)
Q Consensus 117 ~vwd~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i 191 (591)
++||+.+. +....+ .+|...|.+++|+|+ +++|++++.||.|
T Consensus 92 ~vw~~~~~~~~~~~~~~~---------------------------------~~h~~~v~~~~~~~~~~~~l~s~~~dg~v 138 (416)
T 2pm9_A 92 ELYSTNEANNAINSMARF---------------------------------SNHSSSVKTVKFNAKQDNVLASGGNNGEI 138 (416)
T ss_dssp EEECCSSTTSCCCEEEEC---------------------------------CCSSSCCCEEEECSSSTTBEEEECSSSCE
T ss_pred EEeecccccccccchhhc---------------------------------cCCccceEEEEEcCCCCCEEEEEcCCCeE
Confidence 99999861 122221 367888999999998 8999999999999
Q ss_pred EEeCCCCeE------EEE----eccCCCcEEEEEEEcC-CceEEEEeCCCcEEEEEccCCCcceEEeeeec------ccc
Q psy710 192 RLLGRPGVD------AHV----RHETDAAVIQMQFLTN-EGALITATADDSLHLWNFRQKRPEIVHSLKFQ------RER 254 (591)
Q Consensus 192 ~i~d~~~~~------~~~----~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~------~~~ 254 (591)
++||+...+ ... ...+...|.+++|+|+ +.+|++++.|+.|++||++++ +.+..+..+ ...
T Consensus 139 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~--~~~~~~~~~~~~~~~~~~ 216 (416)
T 2pm9_A 139 FIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAK--KEVIHLSYTSPNSGIKQQ 216 (416)
T ss_dssp EBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTT--EEEEEECCCCCSSCCCCC
T ss_pred EEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCC--CcceEEeccccccccCCc
Confidence 999998765 221 1345679999999999 789999999999999999987 677777765 688
Q ss_pred EEEEEecCCC-CEEEEEeCCc---cEEEEEccCccccceeeehhhhcccccc-CCCCCeEEEecCCCCCCeEEEEEcCCE
Q psy710 255 ITYIHLPLQS-KWLYVGTEKG---NIHVVNIESFTLSGYIINWNKAIDVCMK-THPGPIIHLSDNPLDPSKLLLAYETGL 329 (591)
Q Consensus 255 v~~~~~sp~~-~~l~~~~~dg---~i~i~d~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~~l~~~~~dg~ 329 (591)
+.+++|+|++ .++++++.|+ .|++||+++.... ...+. +|...|.+++|+|.++++|++++.|+.
T Consensus 217 v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~----------~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~ 286 (416)
T 2pm9_A 217 LSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTP----------LQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNT 286 (416)
T ss_dssp EEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSC----------SBCCCSCCSSCEEEEEECSSCSSCEEEEESSSE
T ss_pred eEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCC----------cEEeecCccCceeEEEeCCCCCCeEEEEeCCCC
Confidence 9999999997 6899999998 9999999986331 33566 899999999999867889999999999
Q ss_pred EEEEecccceEEEEec-cCCCeeEEEEeecC-CEEEEEecCCcEEEEecCCCCCceeeec--------------cccc--
Q psy710 330 VVHWDLKLKRAEFRWQ-CSEPIKSVCWHYEG-KQFLCSHTDGTISTWAVRPLAKPVSVNQ--------------PHIK-- 391 (591)
Q Consensus 330 i~iwd~~~~~~~~~~~-~~~~v~~~~~sp~g-~~l~s~~~dg~i~vwd~~~~~~~~~~~~--------------~~~~-- 391 (591)
|++||+.+++.+..+. |...|.+++|+|++ .+|++++.||.|++||+... ....... .+..
T Consensus 287 v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (416)
T 2pm9_A 287 VLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNL-TNTLDEQETETKQQESETDFWNNVSRE 365 (416)
T ss_dssp EEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCC-CCSSCC---------------------
T ss_pred EEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCC-CCCcccccccccccCCccccccccccc
Confidence 9999999998887775 88999999999999 89999999999999999843 3222111 1100
Q ss_pred --------ccCCCCCCCCCcceEEEEeecCCCCcEEEEECCccC
Q psy710 392 --------TNKDGKLEQCKPIQKVEWKHSRSGEGFVIFSGGLTY 427 (591)
Q Consensus 392 --------~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~g~~~~ 427 (591)
+..+.+.....++..++|+| ++.+|++|+.+.
T Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~----dg~~la~~~~d~ 405 (416)
T 2pm9_A 366 ESKEKPSVFHLQAPTWYGEPSPAAHWAF----GGKLVQITPDGK 405 (416)
T ss_dssp -CCSCCCSSCCCCCSTTCCCSCCCEEET----TTEEECBCTTSS
T ss_pred ccccccccccccCCccccCCccceEEee----CCeEEEEeCCCC
Confidence 01111122367888999997 678999998553
No 53
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=2.2e-38 Score=320.60 Aligned_cols=313 Identities=14% Similarity=0.171 Sum_probs=268.9
Q ss_pred ceeEeeccCCcce-EEEEEeecCCEEEEecCCCeEEEEeecccCceeeeEEEeeccceEEEEeeCCceEEEEEeCCCcEE
Q psy710 39 VDAHVRHETDAAV-IQMQFLTNEGALITATADDSLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIH 117 (591)
Q Consensus 39 ~~~~~~~~h~~~v-~~l~~sp~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~ 117 (591)
.....+.+|...| .++.| ++++|++++.|++|++||+.++ +.+..+.+|.+.|.+++|++++ .+++++.||.|+
T Consensus 112 ~~~~~l~~h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~~~--~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~ 186 (464)
T 3v7d_B 112 PQRTTLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSINK--KFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVR 186 (464)
T ss_dssp CEEEEEECCSSSCEEEEEE--ETTEEEEEETTSCEEEEETTTT--EEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEE
T ss_pred cceEEEcCCCCCcEEEEEE--CCCEEEEEcCCCcEEEEECCCC--cEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEE
Confidence 3456788998885 55554 6789999999999999999987 4788899999999999999988 899999999999
Q ss_pred EEEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEEC--CCCCEEEEEeCCCcEEEeC
Q psy710 118 VVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFD--PIQKLLAIGTKTGSLRLLG 195 (591)
Q Consensus 118 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~l~~~~~dg~i~i~d 195 (591)
+||+.+++....+. +|...|.+++|+ ++++++++++.||.|++||
T Consensus 187 vwd~~~~~~~~~~~---------------------------------~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd 233 (464)
T 3v7d_B 187 VWDIKKGCCTHVFE---------------------------------GHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWK 233 (464)
T ss_dssp EEETTTTEEEEEEC---------------------------------CCSSCEEEEEEEESSSCEEEEEEETTSCEEEEE
T ss_pred EEECCCCcEEEEEC---------------------------------CCCCccEEEEEecCCCCCEEEEEcCCCcEEEee
Confidence 99999887665554 567788999998 5789999999999999999
Q ss_pred CCCeE------------------------EEEeccCCCcEEEEEEEcCCceEEEEeCCCcEEEEEccCCCcceEEeeeec
Q psy710 196 RPGVD------------------------AHVRHETDAAVIQMQFLTNEGALITATADDSLHLWNFRQKRPEIVHSLKFQ 251 (591)
Q Consensus 196 ~~~~~------------------------~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~ 251 (591)
+.... ......+...+.++ +++++++++++.|+.|++||+++. +.+..+.+|
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~--~~~~~~~~~ 309 (464)
T 3v7d_B 234 LPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQM--KCLYILSGH 309 (464)
T ss_dssp CCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEETTEEEEEETTSCEEEEETTTT--EEEEEECCC
T ss_pred CCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--cCCCCEEEEEeCCCeEEEEECCCC--cEEEEecCC
Confidence 87654 22333445566665 678899999999999999999987 788899999
Q ss_pred cccEEEEEecCCCCEEEEEeCCccEEEEEccCccccceeeehhhhccccccCCCCCeEEEecCCCCCCeEEEEEcCCEEE
Q psy710 252 RERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKLLLAYETGLVV 331 (591)
Q Consensus 252 ~~~v~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~ 331 (591)
...|.+++|+|+++++++|+.||.|++||+.+++. ...+.+|...|.+++|++ ++|++++.||.|+
T Consensus 310 ~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~-----------~~~~~~h~~~v~~~~~~~---~~l~s~s~dg~v~ 375 (464)
T 3v7d_B 310 TDRIYSTIYDHERKRCISASMDTTIRIWDLENGEL-----------MYTLQGHTALVGLLRLSD---KFLVSAAADGSIR 375 (464)
T ss_dssp SSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEE-----------EEEECCCSSCEEEEEECS---SEEEEEETTSEEE
T ss_pred CCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcE-----------EEEEeCCCCcEEEEEEcC---CEEEEEeCCCcEE
Confidence 99999999999999999999999999999998876 336788999999999976 8999999999999
Q ss_pred EEecccceEEEEeccCCCeeEEEEeecCCEEEEEecCCcEEEEecCCCCCceee-ecccccccCCCCCCCCCcceEEEEe
Q psy710 332 HWDLKLKRAEFRWQCSEPIKSVCWHYEGKQFLCSHTDGTISTWAVRPLAKPVSV-NQPHIKTNKDGKLEQCKPIQKVEWK 410 (591)
Q Consensus 332 iwd~~~~~~~~~~~~~~~v~~~~~sp~g~~l~s~~~dg~i~vwd~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~~ 410 (591)
+||+.+++......+...+..++|+|++++|++++ ||.|++||+. +++++.. +.+| ..+|.+++|+
T Consensus 376 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~-~g~~~~~~~~~~-----------~~~v~~v~~~ 442 (464)
T 3v7d_B 376 GWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGS-ENQFNIYNLR-SGKLVHANILKD-----------ADQIWSVNFK 442 (464)
T ss_dssp EEETTTCCEEEEEECTTCCCEEEEEECSSEEEEEE-TTEEEEEETT-TCCEEESCTTTT-----------CSEEEEEEEE
T ss_pred EEECCCCceeeeecCCCCccEEEEEeCCCEEEEec-CCeEEEEECC-CCcEEehhhccC-----------CCcEEEEEec
Confidence 99999998888888888999999999999999998 8999999999 7777765 5666 7899999996
Q ss_pred ecCCCCcEEEEECCc
Q psy710 411 HSRSGEGFVIFSGGL 425 (591)
Q Consensus 411 ~~~~~~~~~l~~g~~ 425 (591)
+..++++++.
T Consensus 443 -----~~~l~~~~~~ 452 (464)
T 3v7d_B 443 -----GKTLVAAVEK 452 (464)
T ss_dssp -----TTEEEEEEEE
T ss_pred -----CCEEEEEEEe
Confidence 3456666653
No 54
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=1.4e-38 Score=345.31 Aligned_cols=436 Identities=14% Similarity=0.186 Sum_probs=321.4
Q ss_pred eeEeeccCCcceEEEEEeecCCEEEEecCCCeEEEEeecccCceeeeEEEeeccceEEEEeeCCceEEEEEeCCCcEEEE
Q psy710 40 DAHVRHETDAAVIQMQFLTNEGALITATADDSLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVV 119 (591)
Q Consensus 40 ~~~~~~~h~~~v~~l~~sp~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw 119 (591)
..+.+.+|.+.|.+++|+|++++|++++.||.|++||+.++ ..+..+..|...|.+++|+|++++|++++.||.|++|
T Consensus 5 ~~~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~--~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw 82 (814)
T 3mkq_A 5 IKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQ--VEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVF 82 (814)
T ss_dssp CEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTT--EEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEE
T ss_pred cceeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCC--ceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEE
Confidence 45678899999999999999999999999999999999887 4788899999999999999999999999999999999
Q ss_pred EeeeeeeeceecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCCCCEEEEEeCCCcEEEeCCCCe
Q psy710 120 NIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGV 199 (591)
Q Consensus 120 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~ 199 (591)
|+.+++....+. +|...|.+++|+|++++|++++.||.|++|++.+.
T Consensus 83 ~~~~~~~~~~~~---------------------------------~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~ 129 (814)
T 3mkq_A 83 NYNTGEKVVDFE---------------------------------AHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENN 129 (814)
T ss_dssp ETTTCCEEEEEE---------------------------------CCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGT
T ss_pred ECCCCcEEEEEe---------------------------------cCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCC
Confidence 999877665554 56778999999999999999999999999998765
Q ss_pred -EE-EEeccCCCcEEEEEEEc-CCceEEEEeCCCcEEEEEccCCCcceEEeeeec-cccEEEEEecC--CCCEEEEEeCC
Q psy710 200 -DA-HVRHETDAAVIQMQFLT-NEGALITATADDSLHLWNFRQKRPEIVHSLKFQ-RERITYIHLPL--QSKWLYVGTEK 273 (591)
Q Consensus 200 -~~-~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~-~~~v~~~~~sp--~~~~l~~~~~d 273 (591)
.. .....+...|.+++|+| +++.|++++.|+.|++||+.+. .....+..+ ...+.+++|+| ++.++++++.|
T Consensus 130 ~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d 207 (814)
T 3mkq_A 130 WALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQS--TPNFTLTTGQERGVNYVDYYPLPDKPYMITASDD 207 (814)
T ss_dssp SEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCS--SCSEEEECCCTTCCCEEEECCSTTCCEEEEECTT
T ss_pred ceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCC--cceeEEecCCCCCEEEEEEEECCCCCEEEEEeCC
Confidence 33 33445567999999999 8899999999999999999877 344444443 48899999999 99999999999
Q ss_pred ccEEEEEccCccccceeeehhhhccccccCCCCCeEEEecCCCCCCeEEEEEcCCEEEEEecccceEEEEec-cCCCeeE
Q psy710 274 GNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKLLLAYETGLVVHWDLKLKRAEFRWQ-CSEPIKS 352 (591)
Q Consensus 274 g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~ 352 (591)
|.|++||+.+++. ...+.+|...|.+++|+| ++++|++++.||.|++||+.+++....+. +...+.+
T Consensus 208 g~i~~~d~~~~~~-----------~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~ 275 (814)
T 3mkq_A 208 LTIKIWDYQTKSC-----------VATLEGHMSNVSFAVFHP-TLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWC 275 (814)
T ss_dssp SEEEEEETTTTEE-----------EEEEECCSSCEEEEEECS-SSSEEEEEETTSCEEEEETTTCSEEEEECCSSSSEEE
T ss_pred CEEEEEECCCCcE-----------EEEEcCCCCCEEEEEEcC-CCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCcEEE
Confidence 9999999988765 335678999999999999 99999999999999999999988887776 7789999
Q ss_pred EEEeecCCE-EEEEecCCcEEEEecCCCCCceeeecccccccCCCCCCCCCcceEEEEeecCCCCcEEEEECCccCCCCC
Q psy710 353 VCWHYEGKQ-FLCSHTDGTISTWAVRPLAKPVSVNQPHIKTNKDGKLEQCKPIQKVEWKHSRSGEGFVIFSGGLTYDKAG 431 (591)
Q Consensus 353 ~~~sp~g~~-l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~g~~~~~~~~ 431 (591)
++|+|+++. +++++.|+.+.+|++. ...+ .+.++| ++.++++++.+...
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-----------------------~~~~~~----~g~~~~~~~~~~~~-- 325 (814)
T 3mkq_A 276 IATHPTGRKNYIASGFDNGFTVLSLG-NDEP-----------------------TLSLDP----VGKLVWSGGKNAAA-- 325 (814)
T ss_dssp EEECTTCGGGEEEEEETTEEEEEECS-CCSC-----------------------CEEECS----SSEEEEECCTTSCT--
T ss_pred EEEccCCCceEEEEEeCCCEEEEEcC-CCCc-----------------------eeEECC----CCCEEEECcccccc--
Confidence 999999973 2444556778999987 3222 223333 33455555432211
Q ss_pred CCCeEEE-Ee-------cc-----eEEEEecCcceeEEEEcCCCCCcCCCCCceEEEEEecCCeEEEecCCCCCCcccCC
Q psy710 432 RSPSISV-MH-------NK-----TTTVLEMEHNVVDFVTLCESPYICEMQEPYAIVVLLHNDLVVIDLLTPGFPCFENP 498 (591)
Q Consensus 432 ~~~~~~~-~~-------~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 498 (591)
...... +. +. ..........+..+...|+ ...+++..++.+.+|++...
T Consensus 326 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spd---------g~~la~~~~~~~~i~~~~~~-------- 387 (814)
T 3mkq_A 326 -SDIFTAVIRGNEEVEQDEPLSLQTKELGSVDVFPQSLAHSPN---------GRFVTVVGDGEYVIYTALAW-------- 387 (814)
T ss_dssp -TCEEEEECCSCCCCCSSSCBCCCCEEECCCSSCCSEEEECTT---------SSEEEEEETTEEEEEETTTT--------
T ss_pred -eeeeeeecccccccccCccceeeeecCCCCccCCceeEECCC---------CCEEEEecCCEEEEEECccc--------
Confidence 001110 00 00 0000111122333333332 33444444333899997431
Q ss_pred ceeeeecCCeeeeeecccCCCChhhhhhhccccccccccCCCCCcccc----CCCccCCCCCCcc---eEEEEEecCCcE
Q psy710 499 YPMDIHESPVTCCVYLADCPSDLIPAFYSVGARGASKRTGFSEKEWPL----SGGEWSPTSCSYY---EVILTGHADGSV 571 (591)
Q Consensus 499 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~----~gg~~~~~~~~~~---~~l~t~~~Dg~v 571 (591)
...+...++++.|.+++. .+..+. .....+.|.. .+.+...+++|++ +.|++++.||+|
T Consensus 388 --~~~~~~~i~~~~~spdg~------~la~~~------~~g~v~l~~~~~~~~~~v~~~~~s~dg~~~~~l~~~~~d~~v 453 (814)
T 3mkq_A 388 --RNKAFGKCQDFVWGPDSN------SYALID------ETGQIKYYKNFKEVTSWSVPMHSAIDRLFSGALLGVKSDGFV 453 (814)
T ss_dssp --EEEEEEECSEEEECTTSS------CEEEEC------TTCCEEEEETTEECTTCCCCCSSCCCEEECSSSEEEEETTEE
T ss_pred --cccCCCceEEEEEeCCCC------eEEEEe------CCCcEEEEECCCCccceEEcCCcCccceecceEEEEecCCEE
Confidence 113455677777766521 111111 1222333421 2344667889999 699999999999
Q ss_pred EEEeCCCCceeEEEE
Q psy710 572 KFWDASAGNLQVLYK 586 (591)
Q Consensus 572 r~Wd~~~~~l~~~~~ 586 (591)
++||+.++.+...+.
T Consensus 454 ~~~d~~~~~~~~~~~ 468 (814)
T 3mkq_A 454 YFFDWDNGTLVRRID 468 (814)
T ss_dssp EEECTTTCCEEEEES
T ss_pred EEEECCcCcEEEEEe
Confidence 999999987665543
No 55
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=3.1e-39 Score=319.92 Aligned_cols=294 Identities=9% Similarity=0.060 Sum_probs=247.3
Q ss_pred ccCCCCCCcEEEeCCCCcEEEEEeCCCcEEEEcCCCc-------eeEeeccCCcceEEEEEeec----C---CEEEEecC
Q psy710 3 RHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGV-------DAHVRHETDAAVIQMQFLTN----E---GALITATA 68 (591)
Q Consensus 3 ~~gh~~~v~~~~~spdg~~la~g~~dg~i~lw~~~~~-------~~~~~~~h~~~v~~l~~sp~----~---~~l~s~~~ 68 (591)
..+|.+.|++++|+| ++||+|+.||.|++|++... ....+.+|...|.+++|+|+ + ++|++++.
T Consensus 12 ~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~ 89 (397)
T 1sq9_A 12 GKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSF 89 (397)
T ss_dssp SSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEET
T ss_pred hhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEEEcC
Confidence 468999999999999 89999999999999998843 47788899999999999999 9 99999999
Q ss_pred CCeEEEEeecccCc---eeeeEEEee-----ccceEEEEee----CCceE-EEEEeCCCcEEEEEeee------eeeec-
Q psy710 69 DDSLHLWNFRQKRP---EIVHSLKFQ-----RERITYIHLP----LQSKW-LYVGTEKGNIHVVNIES------FTLSG- 128 (591)
Q Consensus 69 d~~i~vw~~~~~~~---~~~~~~~~~-----~~~v~~~~~~----~~~~~-l~~~~~d~~i~vwd~~~------~~~~~- 128 (591)
|+.|++|++.+++. .....+..| ...|.+++|+ |+++. |++++.|+.|++||+.+ ++...
T Consensus 90 dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~ 169 (397)
T 1sq9_A 90 SGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNW 169 (397)
T ss_dssp TSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCC
T ss_pred CCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccceeec
Confidence 99999999998751 116777778 5899999999 99999 99999999999999987 44322
Q ss_pred ----eecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCCCCEEEEEeCCCcEEEeCCCCeEEEEe
Q psy710 129 ----YIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGVDAHVR 204 (591)
Q Consensus 129 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~ 204 (591)
.+... ......|...+.+++|+|++ ++++++.+|.|++||+...+....
T Consensus 170 ~~~~~~~~~--------------------------~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~ 222 (397)
T 1sq9_A 170 SPTLELQGT--------------------------VESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYN 222 (397)
T ss_dssp CCEEEEEEE--------------------------ECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEE
T ss_pred cCcceeeee--------------------------eccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEE
Confidence 11100 00002467889999999999 999999999999999987766644
Q ss_pred cc----C---CCcEEEEEEEcCCceEEEEeCC---CcEEEEEccCCCcceEEeeee-------------ccccEEEEEec
Q psy710 205 HE----T---DAAVIQMQFLTNEGALITATAD---DSLHLWNFRQKRPEIVHSLKF-------------QRERITYIHLP 261 (591)
Q Consensus 205 ~~----~---~~~v~~~~~~~~~~~l~~~~~d---~~i~~wd~~~~~~~~~~~~~~-------------~~~~v~~~~~s 261 (591)
.. + ...+.+++|+|++++|++++.| +.|++||+++. +.+..+.. |...|.+++|+
T Consensus 223 ~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 300 (397)
T 1sq9_A 223 FESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFG--ERIGSLSVPTHSSQASLGEFAHSSWVMSLSFN 300 (397)
T ss_dssp EECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTC--CEEEEECBC--------CCBSBSSCEEEEEEC
T ss_pred EeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCC--cccceeccCcccccccccccccCCcEEEEEEC
Confidence 33 4 7799999999999999999999 99999999988 78888888 89999999999
Q ss_pred CCCCEEEEEeCCccEEEEEccCccccceeeehhhhcccccc------CC---------------CCCeEEEecCCCCC--
Q psy710 262 LQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMK------TH---------------PGPIIHLSDNPLDP-- 318 (591)
Q Consensus 262 p~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~------~~---------------~~~v~~~~~sp~~~-- 318 (591)
|++++|++++.||.|++||+.+++... .+. .| ...|.+++|+| ++
T Consensus 301 ~~~~~l~~~~~dg~i~iwd~~~~~~~~-----------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~-~g~~ 368 (397)
T 1sq9_A 301 DSGETLCSAGWDGKLRFWDVKTKERIT-----------TLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLK-KGWR 368 (397)
T ss_dssp SSSSEEEEEETTSEEEEEETTTTEEEE-----------EEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEEC-TTTS
T ss_pred CCCCEEEEEeCCCeEEEEEcCCCceeE-----------EEecccCcccchhhhhccccccccccCCceeEEEecc-cccc
Confidence 999999999999999999999876632 223 44 89999999999 87
Q ss_pred --------CeEEEEEcCCEEEEEecccce
Q psy710 319 --------SKLLLAYETGLVVHWDLKLKR 339 (591)
Q Consensus 319 --------~~l~~~~~dg~i~iwd~~~~~ 339 (591)
++|++++.||.|++||+.+++
T Consensus 369 ~~~~~~~~~~l~s~~~dg~i~iw~~~~g~ 397 (397)
T 1sq9_A 369 SGMGADLNESLCCVCLDRSIRWFREAGGK 397 (397)
T ss_dssp BSTTCTTSCEEEEEETTTEEEEEEEEC--
T ss_pred ccccccccceEEEecCCCcEEEEEcCCCC
Confidence 799999999999999998763
No 56
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=1.6e-38 Score=321.50 Aligned_cols=338 Identities=11% Similarity=0.160 Sum_probs=268.5
Q ss_pred ccCCCCCC-cEEEeCCCCcEEEEEeCCCcEEEEcCC-CceeEeeccCCcceEEEEEeecCCEEEEecCCCeEEEEeeccc
Q psy710 3 RHGFPYQP-TAIAFDPIQKLLAIGTKTGSLRLLGRP-GVDAHVRHETDAAVIQMQFLTNEGALITATADDSLHLWNFRQK 80 (591)
Q Consensus 3 ~~gh~~~v-~~~~~spdg~~la~g~~dg~i~lw~~~-~~~~~~~~~h~~~v~~l~~sp~~~~l~s~~~d~~i~vw~~~~~ 80 (591)
..||...| +++++ ++++|++|+.||.|++||+. +..+..+.+|.+.|.+++|+|++ +|++++.|++|++||++++
T Consensus 117 l~~h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~ 193 (464)
T 3v7d_B 117 LRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKG 193 (464)
T ss_dssp EECCSSSCEEEEEE--ETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTTT
T ss_pred EcCCCCCcEEEEEE--CCCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCC
Confidence 35788886 55555 56899999999999999987 67778889999999999999987 9999999999999999987
Q ss_pred CceeeeEEEeeccceEEEEee--CCceEEEEEeCCCcEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCc
Q psy710 81 RPEIVHSLKFQRERITYIHLP--LQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDP 158 (591)
Q Consensus 81 ~~~~~~~~~~~~~~v~~~~~~--~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (591)
+.+..+.+|...|.+++|+ ++++++++++.|+.|++||+.+++........... ............
T Consensus 194 --~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~ 261 (464)
T 3v7d_B 194 --CCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDY----------PLVFHTPEENPY 261 (464)
T ss_dssp --EEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCS----------SEEESCGGGCTT
T ss_pred --cEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCc----------ceEeeccCCCeE
Confidence 4788899999999999998 57899999999999999999886543322111000 000000000111
Q ss_pred ceeeeccCCCCceEEEECCCCCEEEEEeCCCcEEEeCCCCeEEEEe-ccCCCcEEEEEEEcCCceEEEEeCCCcEEEEEc
Q psy710 159 SKTFRHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGVDAHVR-HETDAAVIQMQFLTNEGALITATADDSLHLWNF 237 (591)
Q Consensus 159 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~ 237 (591)
......+|...+.++ +++++++++++.||.|++||+.+.+.... ..+...|.+++|+|++++|++++.|+.|++||+
T Consensus 262 ~~~~~~~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~ 339 (464)
T 3v7d_B 262 FVGVLRGHMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDL 339 (464)
T ss_dssp EEEEECCCSSCEEEE--EEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEET
T ss_pred EEEEccCccceEEEE--cCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEC
Confidence 122224666666666 67889999999999999999988776644 345779999999999999999999999999999
Q ss_pred cCCCcceEEeeeeccccEEEEEecCCCCEEEEEeCCccEEEEEccCccccceeeehhhhccccccCCCCCeEEEecCCCC
Q psy710 238 RQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLD 317 (591)
Q Consensus 238 ~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~ 317 (591)
+++ +.+..+.+|...|.+++++ ++++++++.||.|++||+.+.... ....|...+..++|+| +
T Consensus 340 ~~~--~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~~------------~~~~~~~~~~~~~~~~-~ 402 (464)
T 3v7d_B 340 ENG--ELMYTLQGHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSRK------------FSYHHTNLSAITTFYV-S 402 (464)
T ss_dssp TTT--EEEEEECCCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEE------------EEEECTTCCCEEEEEE-C
T ss_pred CCC--cEEEEEeCCCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCcee------------eeecCCCCccEEEEEe-C
Confidence 988 7899999999999999996 589999999999999999986542 1223566778889999 9
Q ss_pred CCeEEEEEcCCEEEEEecccceEEEE--eccCCCeeEEEEeecCCEEEEEecCCcEEEEec
Q psy710 318 PSKLLLAYETGLVVHWDLKLKRAEFR--WQCSEPIKSVCWHYEGKQFLCSHTDGTISTWAV 376 (591)
Q Consensus 318 ~~~l~~~~~dg~i~iwd~~~~~~~~~--~~~~~~v~~~~~sp~g~~l~s~~~dg~i~vwd~ 376 (591)
++++++++ |+.|++||+.+++++.. ..|...|.+++|+ +..++++++.||.+.+|-+
T Consensus 403 ~~~l~~~~-dg~i~iwd~~~g~~~~~~~~~~~~~v~~v~~~-~~~l~~~~~~~g~~~i~~l 461 (464)
T 3v7d_B 403 DNILVSGS-ENQFNIYNLRSGKLVHANILKDADQIWSVNFK-GKTLVAAVEKDGQSFLEIL 461 (464)
T ss_dssp SSEEEEEE-TTEEEEEETTTCCEEESCTTTTCSEEEEEEEE-TTEEEEEEEETTEEEEEEE
T ss_pred CCEEEEec-CCeEEEEECCCCcEEehhhccCCCcEEEEEec-CCEEEEEEEeCCeEEEEEe
Confidence 99999988 89999999999999875 3488999999997 4455556667776555543
No 57
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=9.8e-39 Score=339.03 Aligned_cols=287 Identities=15% Similarity=0.232 Sum_probs=246.0
Q ss_pred EeeccCCcceEEEEEeecC-CEEEEecCCCeEEEEeecccCc---eeeeEEEeeccceEEEEeeCCceEEEEEeCCCcEE
Q psy710 42 HVRHETDAAVIQMQFLTNE-GALITATADDSLHLWNFRQKRP---EIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIH 117 (591)
Q Consensus 42 ~~~~~h~~~v~~l~~sp~~-~~l~s~~~d~~i~vw~~~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~ 117 (591)
..+.+|.+.|++++|+|++ ++|++++.|++|++|++..... .....+.+|...|.+++|+|++++|++|+.|+.|+
T Consensus 376 ~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~ 455 (694)
T 3dm0_A 376 GTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELR 455 (694)
T ss_dssp EEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred hhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEE
Confidence 4678999999999999875 7899999999999999976431 34567889999999999999999999999999999
Q ss_pred EEEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCCCCEEEEEeCCCcEEEeCCC
Q psy710 118 VVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRP 197 (591)
Q Consensus 118 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~ 197 (591)
+||+.+++....+. +|...|.+++|+|++++|++++.|+.|++||..
T Consensus 456 vwd~~~~~~~~~~~---------------------------------~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~ 502 (694)
T 3dm0_A 456 LWDLAAGVSTRRFV---------------------------------GHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTL 502 (694)
T ss_dssp EEETTTTEEEEEEE---------------------------------CCSSCEEEEEECTTSSCEEEEETTSCEEEECTT
T ss_pred EEECCCCcceeEEe---------------------------------CCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECC
Confidence 99999877665544 677889999999999999999999999999987
Q ss_pred CeEEEEe----ccCCCcEEEEEEEcCC--ceEEEEeCCCcEEEEEccCCCcceEEeeeeccccEEEEEecCCCCEEEEEe
Q psy710 198 GVDAHVR----HETDAAVIQMQFLTNE--GALITATADDSLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGT 271 (591)
Q Consensus 198 ~~~~~~~----~~~~~~v~~~~~~~~~--~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~ 271 (591)
....... ..|...|.+++|+|++ ..|++++.|+.|++||+++. +....+.+|.+.|.+++|+|++++|++++
T Consensus 503 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~--~~~~~~~~h~~~v~~v~~spdg~~l~sg~ 580 (694)
T 3dm0_A 503 GECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNC--KLRSTLAGHTGYVSTVAVSPDGSLCASGG 580 (694)
T ss_dssp SCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTC--CEEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred CCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCC--cEEEEEcCCCCCEEEEEEeCCCCEEEEEe
Confidence 6654433 2356689999999987 57999999999999999987 78888999999999999999999999999
Q ss_pred CCccEEEEEccCccccceeeehhhhccccccCCCCCeEEEecCCCCCCeEEEEEcCCEEEEEecccceEEEEecc-----
Q psy710 272 EKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKLLLAYETGLVVHWDLKLKRAEFRWQC----- 346 (591)
Q Consensus 272 ~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~----- 346 (591)
.||.|++||+.+++.. ..+ .+...|.+++|+| ++.+|++++ ++.|++||+++++++..+..
T Consensus 581 ~Dg~i~iwd~~~~~~~-----------~~~-~~~~~v~~~~~sp-~~~~l~~~~-~~~i~iwd~~~~~~~~~~~~~~~~~ 646 (694)
T 3dm0_A 581 KDGVVLLWDLAEGKKL-----------YSL-EANSVIHALCFSP-NRYWLCAAT-EHGIKIWDLESKSIVEDLKVDLKAE 646 (694)
T ss_dssp TTSBCEEEETTTTEEE-----------ECC-BCSSCEEEEEECS-SSSEEEEEE-TTEEEEEETTTTEEEEEECCCCC--
T ss_pred CCCeEEEEECCCCceE-----------EEe-cCCCcEEEEEEcC-CCcEEEEEc-CCCEEEEECCCCCChhhhccccccc
Confidence 9999999999987653 122 3456799999999 887777665 56799999999988766541
Q ss_pred ---------------CCCeeEEEEeecCCEEEEEecCCcEEEEecC
Q psy710 347 ---------------SEPIKSVCWHYEGKQFLCSHTDGTISTWAVR 377 (591)
Q Consensus 347 ---------------~~~v~~~~~sp~g~~l~s~~~dg~i~vwd~~ 377 (591)
...+++++|+|+|++|++|+.||.|++|++.
T Consensus 647 ~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 647 AEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGIG 692 (694)
T ss_dssp --------------CCCCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred cccccccccccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEEEecc
Confidence 1137899999999999999999999999986
No 58
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=6.6e-39 Score=315.79 Aligned_cols=298 Identities=15% Similarity=0.203 Sum_probs=243.7
Q ss_pred eeEeeccCCcceEEEEEeecC-CEEEEecCCCeEEEEeecccCceeeeEEEeeccceEEEEeeC-CceEEEEEeCCCcEE
Q psy710 40 DAHVRHETDAAVIQMQFLTNE-GALITATADDSLHLWNFRQKRPEIVHSLKFQRERITYIHLPL-QSKWLYVGTEKGNIH 117 (591)
Q Consensus 40 ~~~~~~~h~~~v~~l~~sp~~-~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~ 117 (591)
....+.+|...|.+++|+|++ ++|++++.|+.|++||+.+++........+|...|.+++|+| +++.|++++.|+.|+
T Consensus 65 ~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~ 144 (383)
T 3ei3_B 65 LHRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATT 144 (383)
T ss_dssp EEEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEE
T ss_pred eEEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEE
Confidence 355778999999999999999 999999999999999999876433334447999999999999 789999999999999
Q ss_pred EEEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCCCCEEEEEeCCCcEEEeCCC
Q psy710 118 VVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRP 197 (591)
Q Consensus 118 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~ 197 (591)
+||+.+... ..+..+ .++...|.+++|+|++++|++++.|+.|++||+.
T Consensus 145 iwd~~~~~~-~~~~~~------------------------------~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~ 193 (383)
T 3ei3_B 145 LRDFSGSVI-QVFAKT------------------------------DSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLD 193 (383)
T ss_dssp EEETTSCEE-EEEECC------------------------------CCSSCCEEEEEEETTTTEEEEEETTSEEEEEETT
T ss_pred EEECCCCce-EEEecc------------------------------CCCCCCeEEEEECCCCCEEEEECCCCCEEEEECC
Confidence 999986332 222211 2345778999999999999999999999999997
Q ss_pred CeEEEEeccCCCcEEEEEEEcCCc-eEEEEeCCCcEEEEEccCCC--cceEEeeeeccccEEEEEecC-CCCEEEEEeCC
Q psy710 198 GVDAHVRHETDAAVIQMQFLTNEG-ALITATADDSLHLWNFRQKR--PEIVHSLKFQRERITYIHLPL-QSKWLYVGTEK 273 (591)
Q Consensus 198 ~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~~wd~~~~~--~~~~~~~~~~~~~v~~~~~sp-~~~~l~~~~~d 273 (591)
.........+...|.+++|+|+++ +|++++.|+.|++||+++.+ ...+..+ .|...|.+++|+| ++++|++++.|
T Consensus 194 ~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d 272 (383)
T 3ei3_B 194 GHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQR 272 (383)
T ss_dssp SCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEESS
T ss_pred CCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcCC
Confidence 776666666778999999999999 89999999999999999732 2455555 6889999999999 99999999999
Q ss_pred ccEEEEEccCccccceeeehhhhccccccCC----------CCCeEEEecCCCCCCeEEEEEcCCEEEEEecccceEEEE
Q psy710 274 GNIHVVNIESFTLSGYIINWNKAIDVCMKTH----------PGPIIHLSDNPLDPSKLLLAYETGLVVHWDLKLKRAEFR 343 (591)
Q Consensus 274 g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~----------~~~v~~~~~sp~~~~~l~~~~~dg~i~iwd~~~~~~~~~ 343 (591)
+.|++||+++++.......... ....| .+.+..++|+| ++++ +++.|+.|++||+.+++.+..
T Consensus 273 ~~i~iwd~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~p~~~~~~~~~s~-dg~~--s~s~d~~i~iwd~~~~~~~~~ 345 (383)
T 3ei3_B 273 NEIRVYSSYDWSKPDQIIIHPH----RQFQHLTPIKATWHPMYDLIVAGRYP-DDQL--LLNDKRTIDIYDANSGGLVHQ 345 (383)
T ss_dssp SEEEEEETTBTTSCSEEEECCB----CCCTTSCCCCCEECSSSSEEEEECBC-CTTT--CTTCCCCEEEEETTTCCEEEE
T ss_pred CcEEEEECCCCccccccccccc----cccccccceEEeccCCCCceEEEecC-Cccc--ccCCCCeEEEEecCCCceeee
Confidence 9999999998766432211100 01112 24455677777 7766 778899999999999998888
Q ss_pred ec---cCCCeeEEEEeecCCEEEEEecCCcEEEEecC
Q psy710 344 WQ---CSEPIKSVCWHYEGKQFLCSHTDGTISTWAVR 377 (591)
Q Consensus 344 ~~---~~~~v~~~~~sp~g~~l~s~~~dg~i~vwd~~ 377 (591)
+. +...+..++|+|++++|++++ ||.|++||++
T Consensus 346 l~~~~~~~~~~~~~~s~~g~~l~s~s-d~~i~iw~~~ 381 (383)
T 3ei3_B 346 LRDPNAAGIISLNKFSPTGDVLASGM-GFNILIWNRE 381 (383)
T ss_dssp ECBTTBCSCCCEEEECTTSSEEEEEE-TTEEEEEECC
T ss_pred ecCCCCCceEEEEEEecCccEEEEec-CCcEEEEecC
Confidence 76 467788889999999999997 9999999997
No 59
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=1.4e-39 Score=319.46 Aligned_cols=291 Identities=11% Similarity=0.124 Sum_probs=248.3
Q ss_pred eccCCcceEEEEEeecCCEEEEecCCCeEEEEeecccCceeeeEEEeeccceEEEEeeCCceEEEEEeCCCcEEEEEeee
Q psy710 44 RHETDAAVIQMQFLTNEGALITATADDSLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIES 123 (591)
Q Consensus 44 ~~~h~~~v~~l~~sp~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~ 123 (591)
+..|..+|.+++|+|++++|++++.|+.|++||+.+++...+..+.+|...|.+++|+|++++|++++.|+.|++||+.+
T Consensus 4 ~~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~ 83 (372)
T 1k8k_C 4 HSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKG 83 (372)
T ss_dssp EESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEET
T ss_pred ecccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCC
Confidence 45689999999999999999999999999999999874347888999999999999999999999999999999999988
Q ss_pred eeeeceecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCCCCEEEEEeCCCcEEEeCCCCeE---
Q psy710 124 FTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGVD--- 200 (591)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~--- 200 (591)
++...... ..+|...|.+++|+|++++|++++.+|.|++||+....
T Consensus 84 ~~~~~~~~-------------------------------~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~ 132 (372)
T 1k8k_C 84 RTWKPTLV-------------------------------ILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWW 132 (372)
T ss_dssp TEEEEEEE-------------------------------CCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEE
T ss_pred CeeeeeEE-------------------------------eecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcce
Confidence 66433321 02466789999999999999999999999999987653
Q ss_pred --EEEeccCCCcEEEEEEEcCCceEEEEeCCCcEEEEEccC----------------CCcceEEeeeeccccEEEEEecC
Q psy710 201 --AHVRHETDAAVIQMQFLTNEGALITATADDSLHLWNFRQ----------------KRPEIVHSLKFQRERITYIHLPL 262 (591)
Q Consensus 201 --~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~----------------~~~~~~~~~~~~~~~v~~~~~sp 262 (591)
......+...|.+++|+|++++|++++.|+.|++||++. ...+.+..+..|...|.+++|+|
T Consensus 133 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 212 (372)
T 1k8k_C 133 VCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSA 212 (372)
T ss_dssp EEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECS
T ss_pred eeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECC
Confidence 222344577999999999999999999999999999641 12267888888999999999999
Q ss_pred CCCEEEEEeCCccEEEEEccCccccceeeehhhhccccccCCCCCeEEEecCCCCCCeEEEEEcCCEEEEEeccc--ceE
Q psy710 263 QSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKLLLAYETGLVVHWDLKL--KRA 340 (591)
Q Consensus 263 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~iwd~~~--~~~ 340 (591)
++++|++++.|+.|++||+++++. ...+..|...|.+++|+| ++.+|+++ .|+.|++|++.. ++.
T Consensus 213 ~~~~l~~~~~d~~i~i~d~~~~~~-----------~~~~~~~~~~v~~~~~~~-~~~~l~~~-~d~~i~i~~~~~~~~~~ 279 (372)
T 1k8k_C 213 NGSRVAWVSHDSTVCLADADKKMA-----------VATLASETLPLLAVTFIT-ESSLVAAG-HDCFPVLFTYDSAAGKL 279 (372)
T ss_dssp SSSEEEEEETTTEEEEEEGGGTTE-----------EEEEECSSCCEEEEEEEE-TTEEEEEE-TTSSCEEEEEETTTTEE
T ss_pred CCCEEEEEeCCCEEEEEECCCCce-----------eEEEccCCCCeEEEEEec-CCCEEEEE-eCCeEEEEEccCcCceE
Confidence 999999999999999999998776 335678888999999999 88888877 999999999988 431
Q ss_pred ---------------------------------------EEEe-ccCCCeeEEEEe-ecC---CEEEEEecCCcEEEEec
Q psy710 341 ---------------------------------------EFRW-QCSEPIKSVCWH-YEG---KQFLCSHTDGTISTWAV 376 (591)
Q Consensus 341 ---------------------------------------~~~~-~~~~~v~~~~~s-p~g---~~l~s~~~dg~i~vwd~ 376 (591)
.... .|...|++++|+ ++| ++|++++.||.|++||+
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~ 359 (372)
T 1k8k_C 280 SFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDV 359 (372)
T ss_dssp EECCCCCCC--------CHHHHHHHCCCCC---------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEH
T ss_pred EEeeccCccccchhhhcchhhhhhhcccccccccCccccccccccccCCcceeEEecCCCcceeeEEEecCCCceEEEEe
Confidence 1112 588999999977 566 99999999999999999
Q ss_pred CC
Q psy710 377 RP 378 (591)
Q Consensus 377 ~~ 378 (591)
+.
T Consensus 360 ~~ 361 (372)
T 1k8k_C 360 RS 361 (372)
T ss_dssp HH
T ss_pred cC
Confidence 83
No 60
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-39 Score=327.17 Aligned_cols=327 Identities=14% Similarity=0.131 Sum_probs=256.1
Q ss_pred EeCCCCcEEEEEeCCCcEEEEcCCCceeEee-ccCCcceEEEEEee-cCCEEEEecCCCeEEEEeecc---cCc-eeeeE
Q psy710 14 AFDPIQKLLAIGTKTGSLRLLGRPGVDAHVR-HETDAAVIQMQFLT-NEGALITATADDSLHLWNFRQ---KRP-EIVHS 87 (591)
Q Consensus 14 ~~spdg~~la~g~~dg~i~lw~~~~~~~~~~-~~h~~~v~~l~~sp-~~~~l~s~~~d~~i~vw~~~~---~~~-~~~~~ 87 (591)
.|+|+++.+++++ .|+.++..+..+ .+|.+.|++++|+| ++++|++++.|++|++||+.+ +.. .....
T Consensus 34 ~f~~~~~~~~~~~------~w~~~g~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~ 107 (437)
T 3gre_A 34 EFGPIQEIVRSPN------MGNLRGKLIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLT 107 (437)
T ss_dssp GGCCCCCCCCCCC------GGGCCCCEEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEE
T ss_pred hcCCccccccccc------cccccceEEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeee
Confidence 4677888777665 499888888888 89999999999999 999999999999999999987 421 11223
Q ss_pred EEeeccceEEEEeeCCceEEEEEeCCCcEEEEEee---eeeeeceecccccccccCCCCCCCceeccCCCCcCcceeee-
Q psy710 88 LKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIE---SFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFR- 163 (591)
Q Consensus 88 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 163 (591)
+ .|...|.+++|+|+++.|++++.|+.|++||+. +++.......+. ...+.
T Consensus 108 ~-~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~------------------------i~~~~~ 162 (437)
T 3gre_A 108 Y-DCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCEC------------------------IRKINL 162 (437)
T ss_dssp E-ECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEE------------------------EEEEEG
T ss_pred c-cCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccce------------------------eEEEEc
Confidence 3 589999999999999999999999999999996 443333322110 00000
Q ss_pred --ccCCCCceEEE--ECCCCCEEEEEeCCCcEEEeCCCCeEEEEecc---CCCcEEEEEEEcCCceEEEEeCCCcEEEEE
Q psy710 164 --HGFPYQPTAIA--FDPIQKLLAIGTKTGSLRLLGRPGVDAHVRHE---TDAAVIQMQFLTNEGALITATADDSLHLWN 236 (591)
Q Consensus 164 --~~~~~~v~~~~--~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd 236 (591)
.++...+.++. ++++++++++++.||.|++||+.+.+...... +...|.+++|+|++++|++++.||.|++||
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd 242 (437)
T 3gre_A 163 KNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWD 242 (437)
T ss_dssp GGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEE
T ss_pred cCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEE
Confidence 01455677777 67899999999999999999998876654332 467999999999999999999999999999
Q ss_pred ccCCCcceEEeee-eccccEEEEEec----CCCCEEEEEeCCccEEEEEccCccccceeeehhhh---cc----------
Q psy710 237 FRQKRPEIVHSLK-FQRERITYIHLP----LQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKA---ID---------- 298 (591)
Q Consensus 237 ~~~~~~~~~~~~~-~~~~~v~~~~~s----p~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~---~~---------- 298 (591)
++.+ +.+..+. .|...|.+++++ |++.+|++++.||.|++||+.+++........... ..
T Consensus 243 ~~~~--~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 320 (437)
T 3gre_A 243 IRFN--VLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEE 320 (437)
T ss_dssp TTTT--EEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGG
T ss_pred cCCc--cEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceeccccccccc
Confidence 9987 7777775 677899999554 57889999999999999999987653222111000 00
Q ss_pred ccccC--CCCCeEEEecCCCCCCeEEEEEcCCEEEEEecccceEEEEec-------------------------------
Q psy710 299 VCMKT--HPGPIIHLSDNPLDPSKLLLAYETGLVVHWDLKLKRAEFRWQ------------------------------- 345 (591)
Q Consensus 299 ~~~~~--~~~~v~~~~~sp~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~------------------------------- 345 (591)
..+.+ |...|.+++|++ +++|++++.|+.|++||+.+++....+.
T Consensus 321 ~~~~~~~~~~~v~~l~~~~--~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (437)
T 3gre_A 321 LNFCGIRSLNALSTISVSN--DKILLTDEATSSIVMFSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTH 398 (437)
T ss_dssp CCCCCCCSGGGGCCEEEET--TEEEEEEGGGTEEEEEETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEECC-----
T ss_pred ceecccccCCceEEEEECC--ceEEEecCCCCeEEEEECCCcccceEEecccccCceEEEEEeecceEEEEEeccccccc
Confidence 01233 778899999985 5899999999999999999876544332
Q ss_pred -------cCCCeeEEEEeec--CCEEEEEecCCcEEEEe
Q psy710 346 -------CSEPIKSVCWHYE--GKQFLCSHTDGTISTWA 375 (591)
Q Consensus 346 -------~~~~v~~~~~sp~--g~~l~s~~~dg~i~vwd 375 (591)
|...|++++|+++ +.+|++++.||.|+||+
T Consensus 399 ~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 399 SVDDSLYHHDIINSISTCEVDETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp --------CCCEEEEEEEESSSSEEEEEEETTSCEEEEC
T ss_pred ccCcccccccceeeEeeeccCCceEEEEEcCCceEEEeC
Confidence 7889999999998 78999999999999995
No 61
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=5.1e-39 Score=318.38 Aligned_cols=287 Identities=12% Similarity=0.104 Sum_probs=248.1
Q ss_pred eEeeccCCcceEEEEEeecCCEEEEecCCCeEEEEeecccC----ceeeeEEEeeccceEEEEeeCC----c---eEEEE
Q psy710 41 AHVRHETDAAVIQMQFLTNEGALITATADDSLHLWNFRQKR----PEIVHSLKFQRERITYIHLPLQ----S---KWLYV 109 (591)
Q Consensus 41 ~~~~~~h~~~v~~l~~sp~~~~l~s~~~d~~i~vw~~~~~~----~~~~~~~~~~~~~v~~~~~~~~----~---~~l~~ 109 (591)
...+.+|.+.|.+++|+| ++|++++.|+.|++|++.+++ ...+..+..|...|.+++|+|+ + ++|++
T Consensus 9 ~~~~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s 86 (397)
T 1sq9_A 9 ANAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVAT 86 (397)
T ss_dssp EEESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEE
T ss_pred hhhhhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEE
Confidence 456789999999999999 799999999999999999875 2357788899999999999999 9 99999
Q ss_pred EeCCCcEEEEEeeeeee-----eceecccccccccCCCCCCCceeccCCCCcCcceeeeccC-----CCCceEEEEC---
Q psy710 110 GTEKGNIHVVNIESFTL-----SGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGF-----PYQPTAIAFD--- 176 (591)
Q Consensus 110 ~~~d~~i~vwd~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~v~~~~~~--- 176 (591)
++.|+.|++||+.+++. ...+. +| ...|.+++|+
T Consensus 87 ~~~dg~i~iw~~~~~~~~~~~~~~~~~---------------------------------~~~~~~~~~~v~~~~~~~~~ 133 (397)
T 1sq9_A 87 TSFSGDLLFYRITREDETKKVIFEKLD---------------------------------LLDSDMKKHSFWALKWGASN 133 (397)
T ss_dssp EETTSCEEEEEEEECTTTCCEEEEEEC---------------------------------CSCTTGGGSCEEEEEEECCC
T ss_pred EcCCCCEEEEEccCCcccccccceeec---------------------------------ccccccCCCcEEEEEEeecc
Confidence 99999999999998653 22222 33 4779999999
Q ss_pred -CCCCE-EEEEeCCCcEEEeCCCC------eEE--------EEe-----ccCCCcEEEEEEEcCCceEEEEeCCCcEEEE
Q psy710 177 -PIQKL-LAIGTKTGSLRLLGRPG------VDA--------HVR-----HETDAAVIQMQFLTNEGALITATADDSLHLW 235 (591)
Q Consensus 177 -~~~~~-l~~~~~dg~i~i~d~~~------~~~--------~~~-----~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~w 235 (591)
|++++ |++++.||.|++||+.. .+. ... ..+...+.+++|+|++ +|++++.|+.|++|
T Consensus 134 ~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~ 212 (397)
T 1sq9_A 134 DRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQIS 212 (397)
T ss_dssp ----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEE
T ss_pred CCCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEE
Confidence 99999 99999999999999876 322 111 3356789999999999 99999999999999
Q ss_pred EccCCCcceEEeeee---c---cccEEEEEecCCCCEEEEEeCC---ccEEEEEccCccccceeeehhhhccccccC---
Q psy710 236 NFRQKRPEIVHSLKF---Q---RERITYIHLPLQSKWLYVGTEK---GNIHVVNIESFTLSGYIINWNKAIDVCMKT--- 303 (591)
Q Consensus 236 d~~~~~~~~~~~~~~---~---~~~v~~~~~sp~~~~l~~~~~d---g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~--- 303 (591)
|+++. +.+..+.. | ...|.+++|+|++++|++++.| +.|++||+.+++.. ..+..
T Consensus 213 d~~~~--~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~-----------~~~~~~~~ 279 (397)
T 1sq9_A 213 ELSTL--RPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERI-----------GSLSVPTH 279 (397)
T ss_dssp ETTTT--EEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEE-----------EEECBC--
T ss_pred ECCCC--ceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCccc-----------ceeccCcc
Confidence 99987 78888888 8 8999999999999999999999 99999999987653 24444
Q ss_pred ----------CCCCeEEEecCCCCCCeEEEEEcCCEEEEEecccceEEEEec-------c---------------CCCee
Q psy710 304 ----------HPGPIIHLSDNPLDPSKLLLAYETGLVVHWDLKLKRAEFRWQ-------C---------------SEPIK 351 (591)
Q Consensus 304 ----------~~~~v~~~~~sp~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-------~---------------~~~v~ 351 (591)
|...|.+++|+| ++++|++++.|+.|++||+.+++.+..+. | ...|.
T Consensus 280 ~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~ 358 (397)
T 1sq9_A 280 SSQASLGEFAHSSWVMSLSFND-SGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVF 358 (397)
T ss_dssp ------CCBSBSSCEEEEEECS-SSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEE
T ss_pred cccccccccccCCcEEEEEECC-CCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCcee
Confidence 899999999999 99999999999999999999998887776 5 88999
Q ss_pred EEEEeecC----------CEEEEEecCCcEEEEecC
Q psy710 352 SVCWHYEG----------KQFLCSHTDGTISTWAVR 377 (591)
Q Consensus 352 ~~~~sp~g----------~~l~s~~~dg~i~vwd~~ 377 (591)
+++|+|++ ++|++++.||.|++|++.
T Consensus 359 ~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~ 394 (397)
T 1sq9_A 359 DVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREA 394 (397)
T ss_dssp EEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEE
T ss_pred EEEeccccccccccccccceEEEecCCCcEEEEEcC
Confidence 99999998 799999999999999998
No 62
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=2.5e-39 Score=323.11 Aligned_cols=314 Identities=17% Similarity=0.194 Sum_probs=252.7
Q ss_pred ceEEEEEeecCCEEEEecCCCeEEEEeecccCceeeeEEEeeccceEEEEeeCCceEEEEEeCCCcEEEEEeeeeeeece
Q psy710 50 AVIQMQFLTNEGALITATADDSLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGY 129 (591)
Q Consensus 50 ~v~~l~~sp~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~ 129 (591)
.+++++|+|++++|++++.|+.+++||+.+++ ....+..| ..+....|++++++|++++.|+.|++||+.+++....
T Consensus 58 ~~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~--~~~~~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~ 134 (420)
T 3vl1_A 58 AGKGNTFEKVGSHLYKARLDGHDFLFNTIIRD--GSKMLKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREI 134 (420)
T ss_dssp CCTTCEEEEEETTEEEEEETTEEEEEECCSEE--TTTTSCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEE
T ss_pred cccceeeeecCCeEEEEEcCCcEEEEEecccc--eeeEEecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeee
Confidence 34578999999999999999999999998763 34444444 4455567899999999999999999999988765544
Q ss_pred ecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCCCCEEEEEeCCCcEEEeCCCCeEEE-EeccCC
Q psy710 130 IINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGVDAH-VRHETD 208 (591)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~ 208 (591)
+. +|...|.+++|+|++++|++++.|+.|++||+.+.+.. ....+.
T Consensus 135 ~~---------------------------------~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~ 181 (420)
T 3vl1_A 135 DQ---------------------------------AHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHR 181 (420)
T ss_dssp TT---------------------------------SSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCS
T ss_pred cc---------------------------------cccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCC
Confidence 33 57788999999999999999999999999999876544 334467
Q ss_pred CcEEEEEEEcCCceEEEEeCCCcEEEEEccCCCcceEEeeee---cccc---------------------EEEEEecCCC
Q psy710 209 AAVIQMQFLTNEGALITATADDSLHLWNFRQKRPEIVHSLKF---QRER---------------------ITYIHLPLQS 264 (591)
Q Consensus 209 ~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~---~~~~---------------------v~~~~~sp~~ 264 (591)
..|.+++|+|++++|++++.|+.|++||++++ +.+..+.. +... +.+++|+|++
T Consensus 182 ~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~ 259 (420)
T 3vl1_A 182 ATVTDIAIIDRGRNVLSASLDGTIRLWECGTG--TTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYG 259 (420)
T ss_dssp SCEEEEEEETTTTEEEEEETTSCEEEEETTTT--EEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTT
T ss_pred CcEEEEEEcCCCCEEEEEcCCCcEEEeECCCC--ceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCC
Confidence 79999999999999999999999999999988 67777764 2333 4445568999
Q ss_pred CEEEEEeCCccEEEEEccCccccceeeehhhhccccccCCCCCeEEEecCCCCCC-eEEEEEcCCEEEEEecccceE-EE
Q psy710 265 KWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPS-KLLLAYETGLVVHWDLKLKRA-EF 342 (591)
Q Consensus 265 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~-~l~~~~~dg~i~iwd~~~~~~-~~ 342 (591)
++|++++.||.|++||+++++.. ......|...|.+++|+| +++ +|++++.||.|++||+++++. ..
T Consensus 260 ~~l~~~~~dg~i~i~d~~~~~~~----------~~~~~~~~~~v~~~~~~~-~~~~~l~~g~~dg~i~vwd~~~~~~~~~ 328 (420)
T 3vl1_A 260 KYVIAGHVSGVITVHNVFSKEQT----------IQLPSKFTCSCNSLTVDG-NNANYIYAGYENGMLAQWDLRSPECPVG 328 (420)
T ss_dssp EEEEEEETTSCEEEEETTTCCEE----------EEECCTTSSCEEEEEECS-SCTTEEEEEETTSEEEEEETTCTTSCSE
T ss_pred CEEEEEcCCCeEEEEECCCCcee----------EEcccccCCCceeEEEeC-CCCCEEEEEeCCCeEEEEEcCCCcCchh
Confidence 99999999999999999987653 223456889999999999 888 999999999999999998643 33
Q ss_pred Eec--cCCCeeEEEEeecCCEEEEEecCCcEEEEecCCCCCc--------eeeecccccccCCCCCCCCCcceEEEEeec
Q psy710 343 RWQ--CSEPIKSVCWHYEGKQFLCSHTDGTISTWAVRPLAKP--------VSVNQPHIKTNKDGKLEQCKPIQKVEWKHS 412 (591)
Q Consensus 343 ~~~--~~~~v~~~~~sp~g~~l~s~~~dg~i~vwd~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 412 (591)
.+. |...|.++ +.+++++|++++.||.|++|++....++ ...+..| ...|.+++|+|.
T Consensus 329 ~~~~~~~~~v~~~-~~~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~-----------~~~v~~~~~s~~ 396 (420)
T 3vl1_A 329 EFLINEGTPINNV-YFAAGALFVSSGFDTSIKLDIISDPESERPAIEFETPTFLVSN-----------DDAVSQFCYVSD 396 (420)
T ss_dssp EEEESTTSCEEEE-EEETTEEEEEETTTEEEEEEEECCTTCCSCEECTTSCEEECCS-----------SCCCCEEEEECC
T ss_pred hhhccCCCCceEE-EeCCCCEEEEecCCccEEEEeccCCCCCccceeccCccEEccC-----------CcceEEEEEccC
Confidence 333 66777777 4568899999999999999999853322 1223344 789999999985
Q ss_pred CCCCcEEEEECC
Q psy710 413 RSGEGFVIFSGG 424 (591)
Q Consensus 413 ~~~~~~~l~~g~ 424 (591)
...++.++++|.
T Consensus 397 ~~~~g~l~a~g~ 408 (420)
T 3vl1_A 397 DESNGEVLEVGK 408 (420)
T ss_dssp SSSSCEEEEEET
T ss_pred CCCcceEEEEcC
Confidence 554567888776
No 63
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=6.6e-39 Score=315.79 Aligned_cols=280 Identities=13% Similarity=0.153 Sum_probs=231.1
Q ss_pred cCCCCCCcEEEeCCCC-cEEEEEeCCCcEEEEcCC-CceeEee--ccCCcceEEEEEee-cCCEEEEecCCCeEEEEeec
Q psy710 4 HGFPYQPTAIAFDPIQ-KLLAIGTKTGSLRLLGRP-GVDAHVR--HETDAAVIQMQFLT-NEGALITATADDSLHLWNFR 78 (591)
Q Consensus 4 ~gh~~~v~~~~~spdg-~~la~g~~dg~i~lw~~~-~~~~~~~--~~h~~~v~~l~~sp-~~~~l~s~~~d~~i~vw~~~ 78 (591)
.+|.+.|++++|+|++ ++||+|+.||.|++||+. +.....+ .+|...|.+++|+| ++++|++++.|+.|++||+.
T Consensus 70 ~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~ 149 (383)
T 3ei3_B 70 SPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFS 149 (383)
T ss_dssp CCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETT
T ss_pred cCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECC
Confidence 5899999999999999 999999999999999988 3444444 36999999999999 77999999999999999998
Q ss_pred ccCceeeeEEEee---ccceEEEEeeCCceEEEEEeCCCcEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCCC
Q psy710 79 QKRPEIVHSLKFQ---RERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNP 155 (591)
Q Consensus 79 ~~~~~~~~~~~~~---~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (591)
+. ....+..+ ...|.+++|+|+++.|++++.|+.|++||+. ++....+.
T Consensus 150 ~~---~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~-~~~~~~~~------------------------ 201 (383)
T 3ei3_B 150 GS---VIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLD-GHEIFKEK------------------------ 201 (383)
T ss_dssp SC---EEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETT-SCEEEEEE------------------------
T ss_pred CC---ceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECC-CCEEEEec------------------------
Confidence 64 34445444 4789999999999999999999999999984 33333332
Q ss_pred cCcceeeeccCCCCceEEEECCCCC-EEEEEeCCCcEEEeCCCC----eEEEEeccCCCcEEEEEEEc-CCceEEEEeCC
Q psy710 156 LDPSKTFRHGFPYQPTAIAFDPIQK-LLAIGTKTGSLRLLGRPG----VDAHVRHETDAAVIQMQFLT-NEGALITATAD 229 (591)
Q Consensus 156 ~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~i~d~~~----~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d 229 (591)
+|...|.+++|+|+++ ++++++.|+.|++||+.. ........+...|.+++|+| ++++|++++.|
T Consensus 202 ---------~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d 272 (383)
T 3ei3_B 202 ---------LHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQR 272 (383)
T ss_dssp ---------CSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEEESS
T ss_pred ---------cCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCCEEEEEcCC
Confidence 5778899999999998 999999999999999876 55555556778999999999 99999999999
Q ss_pred CcEEEEEccCCCcceEEeeeecc-----------------ccEEEEEecCCCCEEEEEeCCccEEEEEccCccccceeee
Q psy710 230 DSLHLWNFRQKRPEIVHSLKFQR-----------------ERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIIN 292 (591)
Q Consensus 230 ~~i~~wd~~~~~~~~~~~~~~~~-----------------~~v~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 292 (591)
+.|++||+++.+ ....+..|. ..+..++++|++++ +++.|+.|++||+.+++..
T Consensus 273 ~~i~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~----- 343 (383)
T 3ei3_B 273 NEIRVYSSYDWS--KPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLV----- 343 (383)
T ss_dssp SEEEEEETTBTT--SCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEE-----
T ss_pred CcEEEEECCCCc--cccccccccccccccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCcee-----
Confidence 999999998873 333343332 34556777888877 7889999999999988763
Q ss_pred hhhhccccccC--CCCCeEEEecCCCCCCeEEEEEcCCEEEEEeccc
Q psy710 293 WNKAIDVCMKT--HPGPIIHLSDNPLDPSKLLLAYETGLVVHWDLKL 337 (591)
Q Consensus 293 ~~~~~~~~~~~--~~~~v~~~~~sp~~~~~l~~~~~dg~i~iwd~~~ 337 (591)
..+.+ |...+..++|+| ++++|++++ |+.|++||+++
T Consensus 344 ------~~l~~~~~~~~~~~~~~s~-~g~~l~s~s-d~~i~iw~~~~ 382 (383)
T 3ei3_B 344 ------HQLRDPNAAGIISLNKFSP-TGDVLASGM-GFNILIWNRED 382 (383)
T ss_dssp ------EEECBTTBCSCCCEEEECT-TSSEEEEEE-TTEEEEEECC-
T ss_pred ------eeecCCCCCceEEEEEEec-CccEEEEec-CCcEEEEecCC
Confidence 23443 567788889999 999999997 99999999875
No 64
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.9e-38 Score=302.15 Aligned_cols=288 Identities=10% Similarity=0.061 Sum_probs=246.5
Q ss_pred ccCCCCCCcEEEeCCCCcEEEEEeCCCcEEEEcCC-CceeEeeccCCcceEEEEEeecCCEEEEecCCCeEEEEeecccC
Q psy710 3 RHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRP-GVDAHVRHETDAAVIQMQFLTNEGALITATADDSLHLWNFRQKR 81 (591)
Q Consensus 3 ~~gh~~~v~~~~~spdg~~la~g~~dg~i~lw~~~-~~~~~~~~~h~~~v~~l~~sp~~~~l~s~~~d~~i~vw~~~~~~ 81 (591)
..+|.+.|++++| |++++||+|+.||.|++||+. +.....+..|...|.+++|+|++++|++++.|+.+++|++....
T Consensus 14 l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~ 92 (313)
T 3odt_A 14 LKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATS 92 (313)
T ss_dssp ECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCT
T ss_pred hhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEEeeecC
Confidence 4689999999999 999999999999999999987 55667888999999999999999999999999999999987643
Q ss_pred -ceeeeEEEeeccceEEEEeeCCceEEEEEeCCCcEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCcce
Q psy710 82 -PEIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSK 160 (591)
Q Consensus 82 -~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (591)
......+..|...|.+++| +++.+++++.|+.|++|| .++....+.
T Consensus 93 ~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~~~----------------------------- 139 (313)
T 3odt_A 93 GEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EGSLVYNLQ----------------------------- 139 (313)
T ss_dssp TSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TTEEEEEEE-----------------------------
T ss_pred CCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEEecc-----------------------------
Confidence 2456778889999999999 577999999999999999 333333222
Q ss_pred eeeccCCCCceEEEECC-CCCEEEEEeCCCcEEEeCCCCeEEEEeccCCCcEEEEEEEcCCceEEEEeCCCcEEEEEccC
Q psy710 161 TFRHGFPYQPTAIAFDP-IQKLLAIGTKTGSLRLLGRPGVDAHVRHETDAAVIQMQFLTNEGALITATADDSLHLWNFRQ 239 (591)
Q Consensus 161 ~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~ 239 (591)
.|...+.+++|.| +++++++++.||.|++||...........+...+.+++|+|++. +++++.|+.|++||+++
T Consensus 140 ----~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~ 214 (313)
T 3odt_A 140 ----AHNASVWDAKVVSFSENKFLTASADKTIKLWQNDKVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHT 214 (313)
T ss_dssp ----CCSSCEEEEEEEETTTTEEEEEETTSCEEEEETTEEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTT
T ss_pred ----cCCCceeEEEEccCCCCEEEEEECCCCEEEEecCceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCc
Confidence 4677789999988 89999999999999999955544444444678999999999998 99999999999999998
Q ss_pred CCcceEEeeeeccccEEEEEecCCCCEEEEEeCCccEEEEEccCccccceeeehhhhccccccCCCCCeEEEecCCCCCC
Q psy710 240 KRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPS 319 (591)
Q Consensus 240 ~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~ 319 (591)
+ +.+..+..|...|.+++|+|++ .+++++.||.|++||+.+++.. ..+..|...|.+++|+| +++
T Consensus 215 ~--~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~-----------~~~~~~~~~i~~~~~~~-~~~ 279 (313)
T 3odt_A 215 G--DVLRTYEGHESFVYCIKLLPNG-DIVSCGEDRTVRIWSKENGSLK-----------QVITLPAISIWSVDCMS-NGD 279 (313)
T ss_dssp C--CEEEEEECCSSCEEEEEECTTS-CEEEEETTSEEEEECTTTCCEE-----------EEEECSSSCEEEEEECT-TSC
T ss_pred h--hhhhhhhcCCceEEEEEEecCC-CEEEEecCCEEEEEECCCCcee-----------EEEeccCceEEEEEEcc-CCC
Confidence 8 7888999999999999999999 5889999999999999988763 36677888999999999 887
Q ss_pred eEEEEEcCCEEEEEecccceEEEEec
Q psy710 320 KLLLAYETGLVVHWDLKLKRAEFRWQ 345 (591)
Q Consensus 320 ~l~~~~~dg~i~iwd~~~~~~~~~~~ 345 (591)
+++++.||.|++||+++++......
T Consensus 280 -~~~~~~dg~i~iw~~~~~~~~~~~~ 304 (313)
T 3odt_A 280 -IIVGSSDNLVRIFSQEKSRWASEDE 304 (313)
T ss_dssp -EEEEETTSCEEEEESCGGGCCC---
T ss_pred -EEEEeCCCcEEEEeCCCCceeehhh
Confidence 6679999999999999887665444
No 65
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=5.1e-40 Score=323.12 Aligned_cols=337 Identities=15% Similarity=0.086 Sum_probs=232.7
Q ss_pred ccCCCCCCcEEEeCCCCcEEEEEeCCCcEEEEcCCC---ceeEeeccCCcceEEEEEeecCCEEEEecCCCeEEEEeecc
Q psy710 3 RHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPG---VDAHVRHETDAAVIQMQFLTNEGALITATADDSLHLWNFRQ 79 (591)
Q Consensus 3 ~~gh~~~v~~~~~spdg~~la~g~~dg~i~lw~~~~---~~~~~~~~h~~~v~~l~~sp~~~~l~s~~~d~~i~vw~~~~ 79 (591)
...|.+.|++++|+|+|++||+|+.||.|++||+.. .....+.+|...|.+++|+|++++|++++.|++|++||+.+
T Consensus 7 ~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~ 86 (377)
T 3dwl_C 7 LHILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRP 86 (377)
T ss_dssp EEECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC----
T ss_pred EecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCC
Confidence 345778999999999999999999999999999874 56678889999999999999999999999999999999998
Q ss_pred cC-ceeeeEEEeeccceEEEEeeCCceEEEEEeCCCcEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCc
Q psy710 80 KR-PEIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDP 158 (591)
Q Consensus 80 ~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (591)
++ ......+..|...|.+++|+|+++.|++++.|+.|++||+++++.. ..
T Consensus 87 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~-----------------------------~~ 137 (377)
T 3dwl_C 87 DGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDW-----------------------------WV 137 (377)
T ss_dssp --CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----C-----------------------------CC
T ss_pred CCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccc-----------------------------ee
Confidence 74 3356677789999999999999999999999999999999886521 11
Q ss_pred ceeeeccCCCCceEEEECCCCCEEEEEeCCCcEEEeCCC------------------CeEEEEeccCCCcEEEEEEEcCC
Q psy710 159 SKTFRHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRP------------------GVDAHVRHETDAAVIQMQFLTNE 220 (591)
Q Consensus 159 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~------------------~~~~~~~~~~~~~v~~~~~~~~~ 220 (591)
...+...|...|.+++|+|++++|++++.|+.|++||+. ..+......+...|.+++|+|++
T Consensus 138 ~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~ 217 (377)
T 3dwl_C 138 SKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSG 217 (377)
T ss_dssp CEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTS
T ss_pred eeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcccCCceEEEEEECCCC
Confidence 122222378889999999999999999999999999984 24444444667899999999999
Q ss_pred ceEEEEeCCCcEEEEEccCCCc--ceEEeeeeccccEEEEEecCCCCEEEEEeCCccEEEEEccCcccc-ceeeehhhhc
Q psy710 221 GALITATADDSLHLWNFRQKRP--EIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLS-GYIINWNKAI 297 (591)
Q Consensus 221 ~~l~~~~~d~~i~~wd~~~~~~--~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~~~ 297 (591)
++|++++.|+.|++||++++.. ..+..+..|...|.+++|+|++++|++++.++.+ +|+....... ...+......
T Consensus 218 ~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 296 (377)
T 3dwl_C 218 NALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGYNYSPI-LLQGNESGWAHTRDLDAGTSK 296 (377)
T ss_dssp SCEEEEETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEESSSSEE-EECCCC---CCSBCCCSCCCC
T ss_pred CEEEEEeCCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEcCCcEE-EEEeCCCceEEEeeecccccc
Confidence 9999999999999999998842 1267788899999999999999999998866555 7776533211 0000000000
Q ss_pred cc-----cccCCCCCeEEEecCCCCCCeEEEEEcCCEEEEEecccceEEEEeccCCCeeEEEEeecC-C---EEEEEecC
Q psy710 298 DV-----CMKTHPGPIIHLSDNPLDPSKLLLAYETGLVVHWDLKLKRAEFRWQCSEPIKSVCWHYEG-K---QFLCSHTD 368 (591)
Q Consensus 298 ~~-----~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~g-~---~l~s~~~d 368 (591)
.. ...........+.|++ ....+......+... ........|...|+++++.+.. . .|++++.|
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~------~~~~~~~~H~~~i~~~~~~~~~~~~~~~~~s~g~D 369 (377)
T 3dwl_C 297 TSFTHTGNTGEGREEEGPVSFTA-LRSTFRNMDLKGSSQ------SISSLPTVHQNMIATLRPYAGTPGNITAFTSSGTD 369 (377)
T ss_dssp CCBSSSSSBCCCCCC--------------------------------CCCSSSCSSCEEEEEEEEEETTEEEEEEEEETT
T ss_pred ccccccccccccccccccccccc-ccccccchhhccccc------cccccCccccceeEEEeccCCCCCceEEEEeecCC
Confidence 00 0000001133344443 222222111111110 0001112389999999976644 3 69999999
Q ss_pred CcEEEEec
Q psy710 369 GTISTWAV 376 (591)
Q Consensus 369 g~i~vwd~ 376 (591)
|.|++||+
T Consensus 370 g~i~iWdl 377 (377)
T 3dwl_C 370 GRVVLWTL 377 (377)
T ss_dssp SEEEEECC
T ss_pred CcEEEecC
Confidence 99999985
No 66
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=3.7e-38 Score=334.56 Aligned_cols=297 Identities=14% Similarity=0.142 Sum_probs=241.5
Q ss_pred ccCCCCCCcEEEeCCCC-cEEEEEeCCCcEEEEcCCC------ceeEeeccCCcceEEEEEeecCCEEEEecCCCeEEEE
Q psy710 3 RHGFPYQPTAIAFDPIQ-KLLAIGTKTGSLRLLGRPG------VDAHVRHETDAAVIQMQFLTNEGALITATADDSLHLW 75 (591)
Q Consensus 3 ~~gh~~~v~~~~~spdg-~~la~g~~dg~i~lw~~~~------~~~~~~~~h~~~v~~l~~sp~~~~l~s~~~d~~i~vw 75 (591)
..+|.+.|++++|+|++ ++|++|+.|++|++|++.. .....+.+|...|.+++|+|++++|++++.|++|++|
T Consensus 378 l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vw 457 (694)
T 3dm0_A 378 MRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLW 457 (694)
T ss_dssp EECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred cccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEE
Confidence 35899999999999975 7999999999999999762 2346788999999999999999999999999999999
Q ss_pred eecccCceeeeEEEeeccceEEEEeeCCceEEEEEeCCCcEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCCC
Q psy710 76 NFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNP 155 (591)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (591)
|+.++ .....+.+|...|.+++|+|+++.|++++.|++|++||...........
T Consensus 458 d~~~~--~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~------------------------ 511 (694)
T 3dm0_A 458 DLAAG--VSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISE------------------------ 511 (694)
T ss_dssp ETTTT--EEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECS------------------------
T ss_pred ECCCC--cceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeecc------------------------
Confidence 99987 4778899999999999999999999999999999999975432211110
Q ss_pred cCcceeeeccCCCCceEEEECCCC--CEEEEEeCCCcEEEeCCCCeEEEE-eccCCCcEEEEEEEcCCceEEEEeCCCcE
Q psy710 156 LDPSKTFRHGFPYQPTAIAFDPIQ--KLLAIGTKTGSLRLLGRPGVDAHV-RHETDAAVIQMQFLTNEGALITATADDSL 232 (591)
Q Consensus 156 ~~~~~~~~~~~~~~v~~~~~~~~~--~~l~~~~~dg~i~i~d~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~d~~i 232 (591)
...+|...|.+++|+|++ ..+++++.|+.|++||+.+.+... ...|...|.+++|+|++++|++++.|+.|
T Consensus 512 ------~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i 585 (694)
T 3dm0_A 512 ------GGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVV 585 (694)
T ss_dssp ------STTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBC
T ss_pred ------CCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeE
Confidence 003577889999999986 689999999999999998876654 44567799999999999999999999999
Q ss_pred EEEEccCCCcceEEeeeeccccEEEEEecCCCCEEEEEeCCccEEEEEccCccccceeeehhhh--------ccccccCC
Q psy710 233 HLWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKA--------IDVCMKTH 304 (591)
Q Consensus 233 ~~wd~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~--------~~~~~~~~ 304 (591)
++||++++ +.+..+..+ ..+.+++|+|++.++++++ ++.|++||+++++........... .......+
T Consensus 586 ~iwd~~~~--~~~~~~~~~-~~v~~~~~sp~~~~l~~~~-~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 661 (694)
T 3dm0_A 586 LLWDLAEG--KKLYSLEAN-SVIHALCFSPNRYWLCAAT-EHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRK 661 (694)
T ss_dssp EEEETTTT--EEEECCBCS-SCEEEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEECCCCC----------------C
T ss_pred EEEECCCC--ceEEEecCC-CcEEEEEEcCCCcEEEEEc-CCCEEEEECCCCCChhhhccccccccccccccccccCCce
Confidence 99999988 677777654 7899999999999888776 556999999987654211100000 00001122
Q ss_pred CCCeEEEecCCCCCCeEEEEEcCCEEEEEecc
Q psy710 305 PGPIIHLSDNPLDPSKLLLAYETGLVVHWDLK 336 (591)
Q Consensus 305 ~~~v~~~~~sp~~~~~l~~~~~dg~i~iwd~~ 336 (591)
...+++++|+| ++++|++|+.||.|++||+.
T Consensus 662 ~~~~~~l~~sp-dg~~l~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 662 VIYCTSLNWSA-DGSTLFSGYTDGVIRVWGIG 692 (694)
T ss_dssp CCCEEEEEECT-TSSEEEEEETTSEEEEEEC-
T ss_pred eEEeeeEEEcC-CCCEEEEEcCCCeEEEEecc
Confidence 23578999999 99999999999999999985
No 67
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=6.5e-39 Score=313.88 Aligned_cols=294 Identities=13% Similarity=0.157 Sum_probs=244.4
Q ss_pred cccCCCCCCcEEEeCCC----CcEEEEEeCCCcEEEEcCC-CceeEeecc-----CCcceEEEEEeec----CCEEEEec
Q psy710 2 FRHGFPYQPTAIAFDPI----QKLLAIGTKTGSLRLLGRP-GVDAHVRHE-----TDAAVIQMQFLTN----EGALITAT 67 (591)
Q Consensus 2 ~~~gh~~~v~~~~~spd----g~~la~g~~dg~i~lw~~~-~~~~~~~~~-----h~~~v~~l~~sp~----~~~l~s~~ 67 (591)
+..+|.+.|++++|+|+ ...+++++.++.|++|++. +..+..+.. |...|.+++|+|+ +++|++++
T Consensus 13 ~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~ 92 (366)
T 3k26_A 13 LKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAG 92 (366)
T ss_dssp EECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEE
T ss_pred eecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEec
Confidence 35689999999999984 4556666677799999988 555554443 6688999999999 67999999
Q ss_pred CCCeEEEEeecccCceeeeEEEeeccceEEEEeeC-CceEEEEEeCCCcEEEEEeeeeeeeceecccccccccCCCCCCC
Q psy710 68 ADDSLHLWNFRQKRPEIVHSLKFQRERITYIHLPL-QSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPG 146 (591)
Q Consensus 68 ~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (591)
.|+.|++||+.+++ .+..+.+|...|.+++|+| ++++|++++.|+.|++||+.+++....+...
T Consensus 93 ~dg~i~v~d~~~~~--~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~------------- 157 (366)
T 3k26_A 93 SRGIIRIINPITMQ--CIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGV------------- 157 (366)
T ss_dssp TTCEEEEECTTTCC--EEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECST-------------
T ss_pred CCCEEEEEEchhce--EeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEeccc-------------
Confidence 99999999999874 6788889999999999999 9999999999999999999987765554210
Q ss_pred ceeccCCCCcCcceeeeccCCCCceEEEECCCCCEEEEEeCCCcEEEeCCCCeEEEE-----------------------
Q psy710 147 PIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGVDAHV----------------------- 203 (591)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~----------------------- 203 (591)
.+|...|.+++|+|++++|++++.||.|++||+...+...
T Consensus 158 -----------------~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (366)
T 3k26_A 158 -----------------EGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIH 220 (366)
T ss_dssp -----------------TSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEEC
T ss_pred -----------------ccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeec
Confidence 2467889999999999999999999999999987654321
Q ss_pred ------eccCCCcEEEEEEEcCCceEEEEeCCCcEEEEEccCCCc------------ceEEeeeeccccEEEEEecCC--
Q psy710 204 ------RHETDAAVIQMQFLTNEGALITATADDSLHLWNFRQKRP------------EIVHSLKFQRERITYIHLPLQ-- 263 (591)
Q Consensus 204 ------~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~------------~~~~~~~~~~~~v~~~~~sp~-- 263 (591)
...+...|.+++|+ +++|++++.|+.|++||+++... ..+..+..|...|.+++|+|+
T Consensus 221 ~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 298 (366)
T 3k26_A 221 FPDFSTRDIHRNYVDCVRWL--GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFW 298 (366)
T ss_dssp CCSEEECSSCSSCCCEEEEE--TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTT
T ss_pred cCccccccCCcceEEEEEEc--CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCC
Confidence 11256799999998 77999999999999999987632 347788888899999999999
Q ss_pred CCEEEEEeCCccEEEEEccCccccceeeehhhhccccccCC--CCCeEEEecCCCCCCeEEEEEcCCEEEEEeccc
Q psy710 264 SKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTH--PGPIIHLSDNPLDPSKLLLAYETGLVVHWDLKL 337 (591)
Q Consensus 264 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~sp~~~~~l~~~~~dg~i~iwd~~~ 337 (591)
+++|++++.||.|++||+.+++.... ....+..| ...|.+++|+| ++++|++++.||.|++||+.+
T Consensus 299 ~~~l~~~~~dg~i~vwd~~~~~~~~~-------~~~~~~~~~~~~~v~~~~~s~-~~~~l~s~~~dg~i~iwd~~~ 366 (366)
T 3k26_A 299 QKMLALGNQVGKLYVWDLEVEDPHKA-------KCTTLTHHKCGAAIRQTSFSR-DSSILIAVCDDASIWRWDRLR 366 (366)
T ss_dssp SSEEEEECTTSCEEEEECCSSSGGGC-------EEEEECCTTCCSCEEEEEECT-TSSEEEEEETTSEEEEEEC--
T ss_pred CcEEEEEecCCcEEEEECCCCCCccc-------cceEEcccccCCceEEEEeCC-CCCeEEEEeCCCEEEEEEecC
Confidence 99999999999999999998765321 11244555 78999999999 999999999999999999853
No 68
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=3.6e-39 Score=314.54 Aligned_cols=307 Identities=16% Similarity=0.191 Sum_probs=243.3
Q ss_pred ccCCCCCCcEEEeCCCCc-EEEEEeC---CCcEEEEcCCCcee--EeeccCCcceEEEEEeec---CCEEEEecCCCeEE
Q psy710 3 RHGFPYQPTAIAFDPIQK-LLAIGTK---TGSLRLLGRPGVDA--HVRHETDAAVIQMQFLTN---EGALITATADDSLH 73 (591)
Q Consensus 3 ~~gh~~~v~~~~~spdg~-~la~g~~---dg~i~lw~~~~~~~--~~~~~h~~~v~~l~~sp~---~~~l~s~~~d~~i~ 73 (591)
..+|...|++++|+|++. ++++|+. ||.|++||+..... ....+|...|.+++|+|+ +++|++++.|+.|+
T Consensus 14 ~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~ 93 (357)
T 3i2n_A 14 QKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGNLH 93 (357)
T ss_dssp EEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSCEE
T ss_pred ccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCeEE
Confidence 457999999999999995 5556665 89999999884433 233478999999999999 69999999999999
Q ss_pred EEeecccCceeeeEEEeeccceEEEE------eeCCceEEEEEeCCCcEEEEEeeeee-eeceecccccccccCCCCCCC
Q psy710 74 LWNFRQKRPEIVHSLKFQRERITYIH------LPLQSKWLYVGTEKGNIHVVNIESFT-LSGYIINWNKAIDVCMKTHPG 146 (591)
Q Consensus 74 vw~~~~~~~~~~~~~~~~~~~v~~~~------~~~~~~~l~~~~~d~~i~vwd~~~~~-~~~~~~~~~~~~~~~~~~~~~ 146 (591)
+||+.+++ ..+..+.+|...|.++. |+|+++.|++++.|+.|++||+.+++ ....+..+..
T Consensus 94 iwd~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~----------- 161 (357)
T 3i2n_A 94 IWNLEAPE-MPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQG----------- 161 (357)
T ss_dssp EECTTSCS-SCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTT-----------
T ss_pred EEeCCCCC-ccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCC-----------
Confidence 99999875 36778889999999995 57899999999999999999998865 3333321111
Q ss_pred ceeccCCCCcCcceeeeccCCCCceEEE----ECCCCCEEEEEeCCCcEEEeCCCCeEEEEeccCCCcEEEEEEEc---C
Q psy710 147 PIIHLSDNPLDPSKTFRHGFPYQPTAIA----FDPIQKLLAIGTKTGSLRLLGRPGVDAHVRHETDAAVIQMQFLT---N 219 (591)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~----~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~v~~~~~~~---~ 219 (591)
.....+.+++ |+|+++++++++.+|.|++||+.+.+......+...+.+++|+| +
T Consensus 162 ------------------~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~ 223 (357)
T 3i2n_A 162 ------------------ENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWETNIKNGVCSLEFDRKDIS 223 (357)
T ss_dssp ------------------SCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEESCSSSS
T ss_pred ------------------CCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeeecCCCCceEEEEcCCCCCC
Confidence 1134678888 78899999999999999999999988877777778999999999 9
Q ss_pred CceEEEEeCCCcEEEEEccCCCcce---EEeeeeccccEEEEEecCCCC-EEEEEeCCccEEEEEccCccccceeee---
Q psy710 220 EGALITATADDSLHLWNFRQKRPEI---VHSLKFQRERITYIHLPLQSK-WLYVGTEKGNIHVVNIESFTLSGYIIN--- 292 (591)
Q Consensus 220 ~~~l~~~~~d~~i~~wd~~~~~~~~---~~~~~~~~~~v~~~~~sp~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~--- 292 (591)
+++|++++.|+.|++||+++..... ...+..|...|.+++|+|+++ ++++++.||.|++||+...........
T Consensus 224 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~ 303 (357)
T 3i2n_A 224 MNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGI 303 (357)
T ss_dssp CCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSC
T ss_pred CCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCC
Confidence 9999999999999999998763221 123448889999999999998 899999999999999986543210000
Q ss_pred -----hhhhccccccCCCCCeEEEecCCCCCCeEE-EEEcCCEEEEEecccceE
Q psy710 293 -----WNKAIDVCMKTHPGPIIHLSDNPLDPSKLL-LAYETGLVVHWDLKLKRA 340 (591)
Q Consensus 293 -----~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~-~~~~dg~i~iwd~~~~~~ 340 (591)
-.......+..|...|.+++|+| ++++|+ +++.|+.|++||+.+.+.
T Consensus 304 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~s~~~d~~i~iw~~~~~~~ 356 (357)
T 3i2n_A 304 EMGVAGSVSLLQNVTLSTQPISSLDWSP-DKRGLCVCSSFDQTVRVLIVTKLNK 356 (357)
T ss_dssp CCCCCCEEEEEEEEECCSSCEEEEEECS-SSTTEEEEEETTSEEEEEEECC---
T ss_pred ccccccccceeeccccCCCCeeEEEEcC-CCCeEEEEecCCCcEEEEECCCccc
Confidence 00011335678999999999999 999998 799999999999987543
No 69
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=1.2e-38 Score=310.05 Aligned_cols=296 Identities=13% Similarity=0.057 Sum_probs=226.9
Q ss_pred CcceEEEEEeecCCEEEEecCC-------CeEEEEeecccCce--------eeeEEEeeccceEEEEeeCCceEEEEE--
Q psy710 48 DAAVIQMQFLTNEGALITATAD-------DSLHLWNFRQKRPE--------IVHSLKFQRERITYIHLPLQSKWLYVG-- 110 (591)
Q Consensus 48 ~~~v~~l~~sp~~~~l~s~~~d-------~~i~vw~~~~~~~~--------~~~~~~~~~~~v~~~~~~~~~~~l~~~-- 110 (591)
..||++++|+||+++|++|+.| +.|++|++...... ....+..|...|.+++++ ++.++++
T Consensus 14 g~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~--~~~~~~g~~ 91 (365)
T 4h5i_A 14 GYPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDAS--KGIILVGCN 91 (365)
T ss_dssp SSCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEE--TTEEEEECC
T ss_pred CCCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeC--CCEEEEEEC
Confidence 4689999999999999998753 36999999765421 112345666778777664 4555554
Q ss_pred ---------eCCCcEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCCCCE
Q psy710 111 ---------TEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKL 181 (591)
Q Consensus 111 ---------~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 181 (591)
+.|+.+++|++.............. .. ....+...+.+++|+|||++
T Consensus 92 ~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~----------------------~~--~~~~~~~~~~~v~fSpDg~~ 147 (365)
T 4h5i_A 92 ENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVD----------------------FD--ASTNADDYTKLVYISREGTV 147 (365)
T ss_dssp CCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEEC----------------------SS--CCCCTTCCEEEEEECTTSSC
T ss_pred CCccEEEEecCCCcEEEEEecCCCceEEEeeeec----------------------ee--ecCCcccCEEEEEEcCCCCE
Confidence 4577899998876321111000000 00 00123445789999999999
Q ss_pred EEEEe--CCCcEEEeCCCCeEEEEeccCCCcEEEEEEEcCCceEEEEeCCCcEEEEEccCCCcceEEeeeeccccEEEEE
Q psy710 182 LAIGT--KTGSLRLLGRPGVDAHVRHETDAAVIQMQFLTNEGALITATADDSLHLWNFRQKRPEIVHSLKFQRERITYIH 259 (591)
Q Consensus 182 l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~ 259 (591)
+++++ .|+.|++||.++.+......+...|.+++|+|+|++|++++. +.+.+|+..++..........|...|.+++
T Consensus 148 la~as~~~d~~i~iwd~~~~~~~~~~~~~~~V~~v~fspdg~~l~s~s~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~ 226 (365)
T 4h5i_A 148 AAIASSKVPAIMRIIDPSDLTEKFEIETRGEVKDLHFSTDGKVVAYITG-SSLEVISTVTGSCIARKTDFDKNWSLSKIN 226 (365)
T ss_dssp EEEEESCSSCEEEEEETTTTEEEEEEECSSCCCEEEECTTSSEEEEECS-SCEEEEETTTCCEEEEECCCCTTEEEEEEE
T ss_pred EEEEECCCCCEEEEeECCCCcEEEEeCCCCceEEEEEccCCceEEeccc-eeEEEEEeccCcceeeeecCCCCCCEEEEE
Confidence 87655 689999999999888877777779999999999999999885 557778877764333345567888999999
Q ss_pred ecCCCCEEEEEeCCc----cEEEEEccCccccceeeehhhhccccccCCCCCeEEEecCCCCCCeEEEEEcCCEEEEEec
Q psy710 260 LPLQSKWLYVGTEKG----NIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKLLLAYETGLVVHWDL 335 (591)
Q Consensus 260 ~sp~~~~l~~~~~dg----~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~iwd~ 335 (591)
|+|+++++++++.|+ .+++|++........ ....+.+|...|++++|+| ++++||+|+.|+.|+|||+
T Consensus 227 fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~-------~~~~~~~~~~~V~~~~~Sp-dg~~lasgs~D~~V~iwd~ 298 (365)
T 4h5i_A 227 FIADDTVLIAASLKKGKGIVLTKISIKSGNTSVL-------RSKQVTNRFKGITSMDVDM-KGELAVLASNDNSIALVKL 298 (365)
T ss_dssp EEETTEEEEEEEESSSCCEEEEEEEEETTEEEEE-------EEEEEESSCSCEEEEEECT-TSCEEEEEETTSCEEEEET
T ss_pred EcCCCCEEEEEecCCcceeEEeecccccceecce-------eeeeecCCCCCeEeEEECC-CCCceEEEcCCCEEEEEEC
Confidence 999999999999887 578888876543210 0235678899999999999 9999999999999999999
Q ss_pred ccceEEEEe--ccCCCeeEEEEeecCCEEEEEecCCcEEEEecCC
Q psy710 336 KLKRAEFRW--QCSEPIKSVCWHYEGKQFLCSHTDGTISTWAVRP 378 (591)
Q Consensus 336 ~~~~~~~~~--~~~~~v~~~~~sp~g~~l~s~~~dg~i~vwd~~~ 378 (591)
++++++..+ .|...|++++|+|||++||+++.|++|+|||+..
T Consensus 299 ~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 299 KDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLPL 343 (365)
T ss_dssp TTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCT
T ss_pred CCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCC
Confidence 999988775 3999999999999999999999999999999973
No 70
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.3e-37 Score=295.81 Aligned_cols=290 Identities=13% Similarity=0.182 Sum_probs=247.7
Q ss_pred ceeEeeccCCcceEEEEEeecCCEEEEecCCCeEEEEeecccCceeeeEEEeeccceEEEEeeCCceEEEEEeCCCcEEE
Q psy710 39 VDAHVRHETDAAVIQMQFLTNEGALITATADDSLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHV 118 (591)
Q Consensus 39 ~~~~~~~~h~~~v~~l~~sp~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v 118 (591)
.....+.+|.+.|.+++| |++++|++++.||.|++||+.++ .....+..|...|.+++|+|+++.|++++.|+.|++
T Consensus 9 ~~~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~ 85 (313)
T 3odt_A 9 QLSATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQ--WLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMING 85 (313)
T ss_dssp EEEEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSS--EEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEE
T ss_pred HHHHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCC--EEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEE
Confidence 456788999999999999 99999999999999999999876 467888899999999999999999999999999999
Q ss_pred EEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCCCCEEEEEeCCCcEEEeCCCC
Q psy710 119 VNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPG 198 (591)
Q Consensus 119 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~ 198 (591)
|++...... +....+ .+|...|.+++| +++++++++.||.|++|| ..
T Consensus 86 ~~~~~~~~~-----------------------------~~~~~~-~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d-~~ 132 (313)
T 3odt_A 86 VPLFATSGE-----------------------------DPLYTL-IGHQGNVCSLSF--QDGVVISGSWDKTAKVWK-EG 132 (313)
T ss_dssp EETTCCTTS-----------------------------CC-CEE-CCCSSCEEEEEE--ETTEEEEEETTSEEEEEE-TT
T ss_pred EEeeecCCC-----------------------------Ccccch-hhcccCEEEEEe--cCCEEEEEeCCCCEEEEc-CC
Confidence 998763211 111111 357788999999 577999999999999999 44
Q ss_pred eEEEEeccCCCcEEEEEEEc-CCceEEEEeCCCcEEEEEccCCCcceEEeeee-ccccEEEEEecCCCCEEEEEeCCccE
Q psy710 199 VDAHVRHETDAAVIQMQFLT-NEGALITATADDSLHLWNFRQKRPEIVHSLKF-QRERITYIHLPLQSKWLYVGTEKGNI 276 (591)
Q Consensus 199 ~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~-~~~~v~~~~~sp~~~~l~~~~~dg~i 276 (591)
........+...+.++.|.| +++.+++++.|+.|++||.. .....+.. |...+.+++|+|++. +++++.|+.|
T Consensus 133 ~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~----~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i 207 (313)
T 3odt_A 133 SLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQND----KVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLI 207 (313)
T ss_dssp EEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEETT----EEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEE
T ss_pred cEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEecC----ceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeE
Confidence 44445555677999999998 89999999999999999933 56666766 889999999999998 8899999999
Q ss_pred EEEEccCccccceeeehhhhccccccCCCCCeEEEecCCCCCCeEEEEEcCCEEEEEecccceEEEEec-cCCCeeEEEE
Q psy710 277 HVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKLLLAYETGLVVHWDLKLKRAEFRWQ-CSEPIKSVCW 355 (591)
Q Consensus 277 ~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~ 355 (591)
++||+++++. ...+..|...|.+++|+| ++ .|++++.|+.|++||+.+++....+. |...|.+++|
T Consensus 208 ~i~d~~~~~~-----------~~~~~~~~~~i~~~~~~~-~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~ 274 (313)
T 3odt_A 208 KLVDMHTGDV-----------LRTYEGHESFVYCIKLLP-NG-DIVSCGEDRTVRIWSKENGSLKQVITLPAISIWSVDC 274 (313)
T ss_dssp EEEETTTCCE-----------EEEEECCSSCEEEEEECT-TS-CEEEEETTSEEEEECTTTCCEEEEEECSSSCEEEEEE
T ss_pred EEEECCchhh-----------hhhhhcCCceEEEEEEec-CC-CEEEEecCCEEEEEECCCCceeEEEeccCceEEEEEE
Confidence 9999998766 336678999999999999 87 69999999999999999999887776 7789999999
Q ss_pred eecCCEEEEEecCCcEEEEecCCCCCcee
Q psy710 356 HYEGKQFLCSHTDGTISTWAVRPLAKPVS 384 (591)
Q Consensus 356 sp~g~~l~s~~~dg~i~vwd~~~~~~~~~ 384 (591)
+|+++ +++++.||.|++||++ .++...
T Consensus 275 ~~~~~-~~~~~~dg~i~iw~~~-~~~~~~ 301 (313)
T 3odt_A 275 MSNGD-IIVGSSDNLVRIFSQE-KSRWAS 301 (313)
T ss_dssp CTTSC-EEEEETTSCEEEEESC-GGGCCC
T ss_pred ccCCC-EEEEeCCCcEEEEeCC-CCceee
Confidence 99998 6678999999999999 554443
No 71
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=2.5e-39 Score=323.88 Aligned_cols=302 Identities=14% Similarity=0.162 Sum_probs=233.0
Q ss_pred EeeccCCcceEEEEEeec-CCEEEEecCCCeEEEEeecccCceeeeEEEeeccceEEEEeeC-CceEEEEEeCCCcEEEE
Q psy710 42 HVRHETDAAVIQMQFLTN-EGALITATADDSLHLWNFRQKRPEIVHSLKFQRERITYIHLPL-QSKWLYVGTEKGNIHVV 119 (591)
Q Consensus 42 ~~~~~h~~~v~~l~~sp~-~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~vw 119 (591)
.....|...|++|+|+|. +++||+|+.||+|+|||+.+++......+.+|.+.|++++|+| ++++|++++.|++|++|
T Consensus 113 ~~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iw 192 (435)
T 4e54_B 113 QKAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQ 192 (435)
T ss_dssp CEEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEE
T ss_pred ccCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEe
Confidence 345678899999999994 5789999999999999998876556667778999999999998 68899999999999999
Q ss_pred EeeeeeeeceecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCCCCEEEEEeCCCcEEEeCCCCe
Q psy710 120 NIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGV 199 (591)
Q Consensus 120 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~ 199 (591)
|++++........ ..+...+.+++|+|++++|++|+.||.|++||+.+.
T Consensus 193 d~~~~~~~~~~~~-------------------------------~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~ 241 (435)
T 4e54_B 193 DFKGNILRVFASS-------------------------------DTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGK 241 (435)
T ss_dssp ETTSCEEEEEECC-------------------------------SSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSC
T ss_pred eccCCceeEEecc-------------------------------CCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcc
Confidence 9987543322211 123445789999999999999999999999999877
Q ss_pred EEEEeccCCCcEEEEEEEcCCc-eEEEEeCCCcEEEEEccCCCcc-eEEeeeeccccEEEEEecCCCCEEEEEeCCccEE
Q psy710 200 DAHVRHETDAAVIQMQFLTNEG-ALITATADDSLHLWNFRQKRPE-IVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIH 277 (591)
Q Consensus 200 ~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~~wd~~~~~~~-~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~ 277 (591)
.......|...|.+++|+|+++ +|++++.|+.|++||++..+.. .+....+|...|++++|+|++++|++++.||.|+
T Consensus 242 ~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~ 321 (435)
T 4e54_B 242 ELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIR 321 (435)
T ss_dssp BCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEE
T ss_pred eeEEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEE
Confidence 6666666778999999999886 6788999999999999876322 2333457889999999999999999999999999
Q ss_pred EEEccCccccceeeehhhhccccccCCCCCeEEEecCCCCCCeEEEEE------------cCCEEEEEecccceEEEEec
Q psy710 278 VVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKLLLAY------------ETGLVVHWDLKLKRAEFRWQ 345 (591)
Q Consensus 278 i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~------------~dg~i~iwd~~~~~~~~~~~ 345 (591)
+||+.++........... .......+....|+| ++..+++++ .++.|++||..+++++..+.
T Consensus 322 iwd~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~ 395 (435)
T 4e54_B 322 VYSASQWDCPLGLIPHPH-----RHFQHLTPIKAAWHP-RYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLY 395 (435)
T ss_dssp EEESSSSSSEEEECCCCC-----CCCSSSCCCBCEECS-SSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEEC
T ss_pred EEECCCCccceEEecccc-----cccccceeEEEEEcC-CCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEe
Confidence 999998765321111000 000011223345566 555555543 34689999999999887753
Q ss_pred --cCCCeeEE-EEeecCCEEEEEecCCcEEEEecCCCCCc
Q psy710 346 --CSEPIKSV-CWHYEGKQFLCSHTDGTISTWAVRPLAKP 382 (591)
Q Consensus 346 --~~~~v~~~-~~sp~g~~l~s~~~dg~i~vwd~~~~~~~ 382 (591)
|...|.++ +|+|+|++|++|+ |+.|+||+++ .+++
T Consensus 396 ~~~~~~v~s~~~fspdg~~lasg~-d~~i~iW~~~-~gk~ 433 (435)
T 4e54_B 396 DPESSGISSLNEFNPMGDTLASAM-GYHILIWSQQ-EART 433 (435)
T ss_dssp CSSCCCCCCEEEECTTSSCEEEEC-SSEEEECCCC-----
T ss_pred CCCCCcEEEEEEECCCCCEEEEEc-CCcEEEEECC-cCee
Confidence 77888887 6999999999876 8899999998 5543
No 72
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.4e-40 Score=323.07 Aligned_cols=323 Identities=11% Similarity=0.104 Sum_probs=253.5
Q ss_pred cCCCCCCcEEEeCCCCcEEEEEeCCCcEEEEcCCCceeEeeccCCcceEEEEEeecCCEEEEecCCCeEEEEeecccCce
Q psy710 4 HGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGVDAHVRHETDAAVIQMQFLTNEGALITATADDSLHLWNFRQKRPE 83 (591)
Q Consensus 4 ~gh~~~v~~~~~spdg~~la~g~~dg~i~lw~~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~~~d~~i~vw~~~~~~~~ 83 (591)
......|.+++|||||+++|+++.|++|+ | +...+.+.+|...|++++|+|+| .++.+.+|+.+..
T Consensus 12 ~~~~~~v~sv~~SpDG~~iASas~D~TV~--d--~~~~~~l~gh~~~v~~V~FsPdg-------~~~~~~~~~~~~~--- 77 (588)
T 2j04_A 12 KEFEDWKNNLTWARDGTLYLTTFPDISIG--Q--PKYAKDINCNSKNLFHVKEFPLE-------FENKLDFELAQQN--- 77 (588)
T ss_dssp CCCSSSSCCEEECTTSCEEEECSSSEEEE--E--ECCCSCCSSBGGGTEEEEEECCC-------CCCTTTTSCCCSS---
T ss_pred hHhhccEEEEEECCCCCEEEEEcCCceee--c--ccccceecCCCccEEEEEECCCC-------CcceEEEEeCCCc---
Confidence 45678999999999999999999999999 6 33334557999999999999998 4666666654432
Q ss_pred eeeEEEeeccceEEEEeeCCceEEEEEeCCCcEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCcceeee
Q psy710 84 IVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFR 163 (591)
Q Consensus 84 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (591)
....+ .|...|.+++|+|+|+.|++++.||.|++||.+. +...+. +...+
T Consensus 78 ~~~~~-~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~-------------------------- 127 (588)
T 2j04_A 78 GLLNS-QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNL-------------------------- 127 (588)
T ss_dssp CSSTT-SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCS--------------------------
T ss_pred eEeec-CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCcc--------------------------
Confidence 23333 3478899999999999999999999999999544 222222 11110
Q ss_pred ccCCCCceEEEECCCCCEEEEEeCCCcEEEeCCCCeEE--------EEe----ccCCCcEEEEEEEcCCceEEEEeCCCc
Q psy710 164 HGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGVDA--------HVR----HETDAAVIQMQFLTNEGALITATADDS 231 (591)
Q Consensus 164 ~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~--------~~~----~~~~~~v~~~~~~~~~~~l~~~~~d~~ 231 (591)
....+.+++|+|||++||+|+.||+|++||+.++.. ... ..|...|.+++|+|+| +++++.|++
T Consensus 128 --~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~t 203 (588)
T 2j04_A 128 --SSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNS 203 (588)
T ss_dssp --TTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCC
T ss_pred --ccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCe
Confidence 123589999999999999999999999999987631 222 3345799999999999 888999999
Q ss_pred EEEEEccCCCcc-eEEee-eeccccEEEEEecCCCCEEEEEeCCccEEEEEccCccccceeeehhhhccccccCCCCCeE
Q psy710 232 LHLWNFRQKRPE-IVHSL-KFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPII 309 (591)
Q Consensus 232 i~~wd~~~~~~~-~~~~~-~~~~~~v~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 309 (591)
+++||+..+... ..+.+ .+|...|.+++|+ ++.|++++ +++|++||+.+.+.. ....+|...+.
T Consensus 204 VrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs--g~~LASa~-~~tIkLWd~~~~~~~-----------~~~~gh~~~V~ 269 (588)
T 2j04_A 204 VFSMTVSASSHQPVSRMIQNASRRKITDLKIV--DYKVVLTC-PGYVHKIDLKNYSIS-----------SLKTGSLENFH 269 (588)
T ss_dssp EEEECCCSSSSCCCEEEEECCCSSCCCCEEEE--TTEEEEEC-SSEEEEEETTTTEEE-----------EEECSCCSCCC
T ss_pred EEEEECCCCccccceeeecccccCcEEEEEEE--CCEEEEEe-CCeEEEEECCCCeEE-----------EEEcCCCceEE
Confidence 999999887422 34566 3787899999998 68899887 699999999987662 12337999999
Q ss_pred EEec--CCCCCCeEEEEEcCCEEEEEecccceEEEEeccCCCeeEEEEeecCCEEEEEecCCcEEEEecCCCCCceeeec
Q psy710 310 HLSD--NPLDPSKLLLAYETGLVVHWDLKLKRAEFRWQCSEPIKSVCWHYEGKQFLCSHTDGTISTWAVRPLAKPVSVNQ 387 (591)
Q Consensus 310 ~~~~--sp~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~g~~l~s~~~dg~i~vwd~~~~~~~~~~~~ 387 (591)
.++| +| ++..|+++++||+ ++|... .++++||+..+++. |+++++|+.. ++.+..+.
T Consensus 270 ~va~~~s~-d~~~La~a~edG~-klw~~d---------------~~~~spd~~l~a~~--d~~v~lW~~~--g~~l~~~~ 328 (588)
T 2j04_A 270 IIPLNHEK-ESTILLMSNKTSY-KVLLED---------------ELHVTADNIIAPYL--EKKFKKWSTI--WNEFNNYE 328 (588)
T ss_dssp EEEETTCS-SCEEEEECSSCEE-EEEESS---------------SEEEECCCSSHHHH--HHHHHHTTTT--TTSSSSSC
T ss_pred EEEeeeCC-CCCEEEEEcCCCC-EEEeec---------------cEEECCCceEEEEc--CCEEEEEECC--CCceeeec
Confidence 9999 99 9999999999999 999987 26699999888775 9999999986 34444332
Q ss_pred ccccccCCCCCCCCCcceEEEEeecCCCCcEEEEECCc
Q psy710 388 PHIKTNKDGKLEQCKPIQKVEWKHSRSGEGFVIFSGGL 425 (591)
Q Consensus 388 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~g~~ 425 (591)
+ ...|.+++|+| ++.++|+++.
T Consensus 329 -~-----------~~~I~~va~SP----dG~~lA~~~~ 350 (588)
T 2j04_A 329 -T-----------TLVIHGISLSP----DGYSIAIVYD 350 (588)
T ss_dssp -C-----------EEEEEEEEECT----TSSEEEEEEE
T ss_pred -c-----------ceEEEEEEECC----CCCEEEEEEe
Confidence 2 46799999987 6667777664
No 73
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=1.5e-37 Score=303.02 Aligned_cols=292 Identities=14% Similarity=0.215 Sum_probs=235.0
Q ss_pred EeeccCCcceEEEEEeecCCEE-EEecC---CCeEEEEeecccCceeeeEEEeeccceEEEEeeCC---ceEEEEEeCCC
Q psy710 42 HVRHETDAAVIQMQFLTNEGAL-ITATA---DDSLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQ---SKWLYVGTEKG 114 (591)
Q Consensus 42 ~~~~~h~~~v~~l~~sp~~~~l-~s~~~---d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~d~ 114 (591)
..+.+|...|.+++|+|+++.+ ++++. |+.|++||+.+++. .......|...|.+++|+|+ +++|++++.|+
T Consensus 12 ~~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg 90 (357)
T 3i2n_A 12 HIQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDL-KLLREIEKAKPIKCGTFGATSLQQRYLATGDFGG 90 (357)
T ss_dssp EEEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSE-EEEEEEEESSCEEEEECTTCCTTTCCEEEEETTS
T ss_pred hhccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcc-cceeeecccCcEEEEEEcCCCCCCceEEEecCCC
Confidence 4557899999999999999655 56665 89999999998863 22333478899999999998 69999999999
Q ss_pred cEEEEEeeeee-eeceecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEE------ECCCCCEEEEEeC
Q psy710 115 NIHVVNIESFT-LSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIA------FDPIQKLLAIGTK 187 (591)
Q Consensus 115 ~i~vwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~------~~~~~~~l~~~~~ 187 (591)
.|++||+.+++ ....+ .+|...|.+++ |+|++++|++++.
T Consensus 91 ~i~iwd~~~~~~~~~~~---------------------------------~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~ 137 (357)
T 3i2n_A 91 NLHIWNLEAPEMPVYSV---------------------------------KGHKEIINAIDGIGGLGIGEGAPEIVTGSR 137 (357)
T ss_dssp CEEEECTTSCSSCSEEE---------------------------------CCCSSCEEEEEEESGGGCC-CCCEEEEEET
T ss_pred eEEEEeCCCCCccEEEE---------------------------------EecccceEEEeeccccccCCCccEEEEEeC
Confidence 99999998755 33332 25777889995 5789999999999
Q ss_pred CCcEEEeCCCCeE-EE-EeccC----CCcEEEEE----EEcCCceEEEEeCCCcEEEEEccCCCcceEEeeeeccccEEE
Q psy710 188 TGSLRLLGRPGVD-AH-VRHET----DAAVIQMQ----FLTNEGALITATADDSLHLWNFRQKRPEIVHSLKFQRERITY 257 (591)
Q Consensus 188 dg~i~i~d~~~~~-~~-~~~~~----~~~v~~~~----~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~ 257 (591)
||.|++||+...+ .. ....+ ...+.+++ |+|++++|++++.|+.|++||+++. +. .....|...|.+
T Consensus 138 d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~--~~-~~~~~~~~~v~~ 214 (357)
T 3i2n_A 138 DGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNM--AL-RWETNIKNGVCS 214 (357)
T ss_dssp TSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTT--EE-EEEEECSSCEEE
T ss_pred CCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccC--ce-eeecCCCCceEE
Confidence 9999999998754 22 22222 34788888 6789999999999999999999987 44 334567789999
Q ss_pred EEecC---CCCEEEEEeCCccEEEEEccCccccceeeehhhhccccccCCCCCeEEEecCCCCCC-eEEEEEcCCEEEEE
Q psy710 258 IHLPL---QSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPS-KLLLAYETGLVVHW 333 (591)
Q Consensus 258 ~~~sp---~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~-~l~~~~~dg~i~iw 333 (591)
++|+| +++++++++.||.|++||+++.+...... .....+|...|.+++|+| +++ +|++++.||.|++|
T Consensus 215 ~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~------~~~~~~~~~~v~~~~~~~-~~~~~l~~~~~dg~i~iw 287 (357)
T 3i2n_A 215 LEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFA------SVSEKAHKSTVWQVRHLP-QNRELFLTAGGAGGLHLW 287 (357)
T ss_dssp EEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEE------EEEEECCSSCEEEEEEET-TEEEEEEEEETTSEEEEE
T ss_pred EEcCCCCCCCCEEEEECCCCeEEEEeCcCCCccccee------eeccCCCcCCEEEEEECC-CCCcEEEEEeCCCcEEEe
Confidence 99999 99999999999999999999876532100 012348999999999999 888 89999999999999
Q ss_pred ecccc-------------------eEEEEe-ccCCCeeEEEEeecCCEEE-EEecCCcEEEEecC
Q psy710 334 DLKLK-------------------RAEFRW-QCSEPIKSVCWHYEGKQFL-CSHTDGTISTWAVR 377 (591)
Q Consensus 334 d~~~~-------------------~~~~~~-~~~~~v~~~~~sp~g~~l~-s~~~dg~i~vwd~~ 377 (591)
|++.+ +.+..+ .|...|++++|+|++++|+ +++.||.|++||+.
T Consensus 288 d~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~ 352 (357)
T 3i2n_A 288 KYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVT 352 (357)
T ss_dssp EEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEEC
T ss_pred ecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECC
Confidence 99853 233333 4889999999999999998 89999999999998
No 74
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=2.5e-36 Score=303.44 Aligned_cols=310 Identities=14% Similarity=0.202 Sum_probs=267.3
Q ss_pred eeEeeccCCcceEEEEEeecCCEEEEecCCCeEEEEeecccCceeeeEEEeeccceEEEEeeCCceEEEEEeCCCcEEEE
Q psy710 40 DAHVRHETDAAVIQMQFLTNEGALITATADDSLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVV 119 (591)
Q Consensus 40 ~~~~~~~h~~~v~~l~~sp~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw 119 (591)
....+.+|.+.|.. ++++++++|++++.|++|++||+.+++ .+..+.+|...|.+++|+ ++.+++++.|+.|++|
T Consensus 110 ~~~~l~~h~~~v~~-~~~~~g~~l~sg~~dg~i~vwd~~~~~--~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vw 184 (445)
T 2ovr_B 110 SPKVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGK--CLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVW 184 (445)
T ss_dssp CCEEEECSTTSCEE-EEEEETTEEEEEETTSCEEEEETTTCC--EEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEE
T ss_pred eeEEecccCCCcEE-EEEEcCCEEEEEECCCcEEEEECCCCc--EEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEE
Confidence 45678899987643 366678999999999999999999884 788899999999999997 5699999999999999
Q ss_pred EeeeeeeeceecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCCCCEEEEEeCCCcEEEeCCCCe
Q psy710 120 NIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGV 199 (591)
Q Consensus 120 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~ 199 (591)
|+.+++....+. +|...|.+++|+ ++.+++|+.||.|++||+.+.
T Consensus 185 d~~~~~~~~~~~---------------------------------~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~ 229 (445)
T 2ovr_B 185 NAETGECIHTLY---------------------------------GHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETG 229 (445)
T ss_dssp ETTTTEEEEEEC---------------------------------CCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSC
T ss_pred ECCcCcEEEEEC---------------------------------CCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCC
Confidence 999887665554 567778999995 567999999999999999877
Q ss_pred EEEE-eccCCCcEEEEEEEcCCceEEEEeCCCcEEEEEccCCCcceEEeeeeccccEEEEEecCCCCEEEEEeCCccEEE
Q psy710 200 DAHV-RHETDAAVIQMQFLTNEGALITATADDSLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHV 278 (591)
Q Consensus 200 ~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~i 278 (591)
+... ...+...+.++.| +++++++++.|+.|++||++++ +.+..+.+|...|.++.| +++++++++.|+.|++
T Consensus 230 ~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~--~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i 303 (445)
T 2ovr_B 230 QCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETE--TCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRV 303 (445)
T ss_dssp CEEEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGT--EEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEE
T ss_pred cEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCC--cEeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEE
Confidence 6553 3455779999998 7889999999999999999988 788899999999999999 8899999999999999
Q ss_pred EEccCccccceeeehhhhccccccCCCCCeEEEecCCCCCCeEEEEEcCCEEEEEecccceEEEEec----cCCCeeEEE
Q psy710 279 VNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKLLLAYETGLVVHWDLKLKRAEFRWQ----CSEPIKSVC 354 (591)
Q Consensus 279 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~----~~~~v~~~~ 354 (591)
||+.+++. ...+.+|...+.++.+++ +++++++.||.|++||+.+++....+. |...|.+++
T Consensus 304 ~d~~~~~~-----------~~~~~~~~~~v~~~~~~~---~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~ 369 (445)
T 2ovr_B 304 WDVETGNC-----------IHTLTGHQSLTSGMELKD---NILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQ 369 (445)
T ss_dssp EETTTCCE-----------EEEECCCCSCEEEEEEET---TEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEE
T ss_pred EECCCCCE-----------EEEEcCCcccEEEEEEeC---CEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEE
Confidence 99998876 336678899999888755 799999999999999999999888776 778899999
Q ss_pred EeecCCEEEEEecCCcEEEEecCCCCCceeee-----cccccccCCCCCCCCCcceEEEEeecCCCCcEEEEECCccC
Q psy710 355 WHYEGKQFLCSHTDGTISTWAVRPLAKPVSVN-----QPHIKTNKDGKLEQCKPIQKVEWKHSRSGEGFVIFSGGLTY 427 (591)
Q Consensus 355 ~sp~g~~l~s~~~dg~i~vwd~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~g~~~~ 427 (591)
|+ +++|++++.||.|++||+. +++.+..+ .+| ..+|++++|+| ++.++++|+.+.
T Consensus 370 ~~--~~~l~s~~~dg~v~iwd~~-~~~~~~~~~~~~~~~~-----------~~~v~~~~~s~----~~~~la~~~~dg 429 (445)
T 2ovr_B 370 FN--KNFVITSSDDGTVKLWDLK-TGEFIRNLVTLESGGS-----------GGVVWRIRASN----TKLVCAVGSRNG 429 (445)
T ss_dssp EC--SSEEEEEETTSEEEEEETT-TCCEEEEEEECTTGGG-----------TCEEEEEEECS----SEEEEEEECSSS
T ss_pred EC--CCEEEEEeCCCeEEEEECC-CCceeeeeeccccCCC-----------CceEEEEEecC----CEEEEEEcccCC
Confidence 94 6899999999999999999 77777776 344 78999999986 678899988665
No 75
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=7.8e-38 Score=304.44 Aligned_cols=283 Identities=12% Similarity=0.166 Sum_probs=221.1
Q ss_pred CCCCcEEEeCCCCcEEEEEeCCC-------cEEEEcCCCce-----------eEeeccCCcceEEEEEeecCCEEEEe--
Q psy710 7 PYQPTAIAFDPIQKLLAIGTKTG-------SLRLLGRPGVD-----------AHVRHETDAAVIQMQFLTNEGALITA-- 66 (591)
Q Consensus 7 ~~~v~~~~~spdg~~la~g~~dg-------~i~lw~~~~~~-----------~~~~~~h~~~v~~l~~sp~~~~l~s~-- 66 (591)
..+|++++|+|||++||+|+.+. .|++|+++... ...+..|...|.+++++ ++.++++
T Consensus 14 g~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~--~~~~~~g~~ 91 (365)
T 4h5i_A 14 GYPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDAS--KGIILVGCN 91 (365)
T ss_dssp SSCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEE--TTEEEEECC
T ss_pred CCCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeC--CCEEEEEEC
Confidence 45799999999999999997533 59999976211 12466788888887664 4566654
Q ss_pred ---------cCCCeEEEEeecccCceeeeEEE--------eeccceEEEEeeCCceEEEEEe--CCCcEEEEEeeeeeee
Q psy710 67 ---------TADDSLHLWNFRQKRPEIVHSLK--------FQRERITYIHLPLQSKWLYVGT--EKGNIHVVNIESFTLS 127 (591)
Q Consensus 67 ---------~~d~~i~vw~~~~~~~~~~~~~~--------~~~~~v~~~~~~~~~~~l~~~~--~d~~i~vwd~~~~~~~ 127 (591)
+.|+.+++|++..... .+.... .+...+.+++|+|||+++++++ .|++|++||+.+++.+
T Consensus 92 ~~~~~l~s~~~d~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~ 170 (365)
T 4h5i_A 92 ENSTKITQGKGNKHLRKFKYDKVND-QLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEK 170 (365)
T ss_dssp CCHHHHHHTSCCCCEEEEEEETTTT-EEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEE
T ss_pred CCccEEEEecCCCcEEEEEecCCCc-eEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEE
Confidence 4578899999987642 222111 2334588999999999987654 6899999999987765
Q ss_pred ceecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCCCCEEEEEeCCCcEEEeCCCCeEEEE--ec
Q psy710 128 GYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGVDAHV--RH 205 (591)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~--~~ 205 (591)
..+. |...|.+++|+|+++++++++.++.+.+|......... ..
T Consensus 171 ~~~~----------------------------------~~~~V~~v~fspdg~~l~s~s~~~~~~~~~~~~~~~~~~~~~ 216 (365)
T 4h5i_A 171 FEIE----------------------------------TRGEVKDLHFSTDGKVVAYITGSSLEVISTVTGSCIARKTDF 216 (365)
T ss_dssp EEEE----------------------------------CSSCCCEEEECTTSSEEEEECSSCEEEEETTTCCEEEEECCC
T ss_pred EEeC----------------------------------CCCceEEEEEccCCceEEeccceeEEEEEeccCcceeeeecC
Confidence 5543 45678999999999999999877655555555444332 23
Q ss_pred cCCCcEEEEEEEcCCceEEEEeCCC----cEEEEEccCCCcc--eEEeeeeccccEEEEEecCCCCEEEEEeCCccEEEE
Q psy710 206 ETDAAVIQMQFLTNEGALITATADD----SLHLWNFRQKRPE--IVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVV 279 (591)
Q Consensus 206 ~~~~~v~~~~~~~~~~~l~~~~~d~----~i~~wd~~~~~~~--~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~i~ 279 (591)
.+...+.+++|+|+++++++++.|+ .+++|++...... ....+.+|...|++++|+|||++||+|+.|+.|+||
T Consensus 217 ~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iw 296 (365)
T 4h5i_A 217 DKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALV 296 (365)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEE
T ss_pred CCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEE
Confidence 4567899999999999999998887 5888998766322 235567788999999999999999999999999999
Q ss_pred EccCccccceeeehhhhccccccCCCCCeEEEecCCCCCCeEEEEEcCCEEEEEeccc
Q psy710 280 NIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKLLLAYETGLVVHWDLKL 337 (591)
Q Consensus 280 d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~iwd~~~ 337 (591)
|+++++.. ...+.+|...|++++|+| |+++|++++.|++|+|||+..
T Consensus 297 d~~~~~~~----------~~~~~gH~~~V~~v~fSp-dg~~laS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 297 KLKDLSMS----------KIFKQAHSFAITEVTISP-DSTYVASVSAANTIHIIKLPL 343 (365)
T ss_dssp ETTTTEEE----------EEETTSSSSCEEEEEECT-TSCEEEEEETTSEEEEEECCT
T ss_pred ECCCCcEE----------EEecCcccCCEEEEEECC-CCCEEEEEeCCCeEEEEEcCC
Confidence 99998763 224578999999999999 999999999999999999965
No 76
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=7.7e-39 Score=320.27 Aligned_cols=290 Identities=16% Similarity=0.172 Sum_probs=222.5
Q ss_pred cCCCCCCcEEEeCC-CCcEEEEEeCCCcEEEEcCCC-c--eeEeeccCCcceEEEEEee-cCCEEEEecCCCeEEEEeec
Q psy710 4 HGFPYQPTAIAFDP-IQKLLAIGTKTGSLRLLGRPG-V--DAHVRHETDAAVIQMQFLT-NEGALITATADDSLHLWNFR 78 (591)
Q Consensus 4 ~gh~~~v~~~~~sp-dg~~la~g~~dg~i~lw~~~~-~--~~~~~~~h~~~v~~l~~sp-~~~~l~s~~~d~~i~vw~~~ 78 (591)
.+|...|+||+|+| ++++||+|+.||.|+|||+.. . ....+.+|.+.|++++|+| ++++|++++.|++|++||++
T Consensus 116 ~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~ 195 (435)
T 4e54_B 116 APFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFK 195 (435)
T ss_dssp EECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETT
T ss_pred CCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeecc
Confidence 36888999999999 568999999999999999872 2 3345678999999999998 67899999999999999998
Q ss_pred ccCceeeeEEEeeccceEEEEeeCCceEEEEEeCCCcEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCc
Q psy710 79 QKRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDP 158 (591)
Q Consensus 79 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (591)
++..........+...+.+++|+|++++|++|+.||.|++||++... +..+
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~~-~~~~---------------------------- 246 (435)
T 4e54_B 196 GNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGKE-LWNL---------------------------- 246 (435)
T ss_dssp SCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSCB-CCCS----------------------------
T ss_pred CCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcce-eEEE----------------------------
Confidence 65321222222233457899999999999999999999999986522 1111
Q ss_pred ceeeeccCCCCceEEEECCCCC-EEEEEeCCCcEEEeCCCCeEEE----EeccCCCcEEEEEEEcCCceEEEEeCCCcEE
Q psy710 159 SKTFRHGFPYQPTAIAFDPIQK-LLAIGTKTGSLRLLGRPGVDAH----VRHETDAAVIQMQFLTNEGALITATADDSLH 233 (591)
Q Consensus 159 ~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~----~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~ 233 (591)
.+|...|.+++|+|+++ ++++++.|+.|++||+...+.. ....|...|++++|+|++++|++++.|+.|+
T Consensus 247 -----~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~ 321 (435)
T 4e54_B 247 -----RMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIR 321 (435)
T ss_dssp -----BCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEE
T ss_pred -----ecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEE
Confidence 36778899999999875 7889999999999998765422 2334567999999999999999999999999
Q ss_pred EEEccCCCcceEEeeeeccc------cEEEEEecCCCCEEEEEe------------CCccEEEEEccCccccceeeehhh
Q psy710 234 LWNFRQKRPEIVHSLKFQRE------RITYIHLPLQSKWLYVGT------------EKGNIHVVNIESFTLSGYIINWNK 295 (591)
Q Consensus 234 ~wd~~~~~~~~~~~~~~~~~------~v~~~~~sp~~~~l~~~~------------~dg~i~i~d~~~~~~~~~~~~~~~ 295 (591)
+||+.+. .....+..|.. .+....|+|++.+++++. .++.|++||..+++..
T Consensus 322 iwd~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~-------- 391 (435)
T 4e54_B 322 VYSASQW--DCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMM-------- 391 (435)
T ss_dssp EEESSSS--SSEEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEE--------
T ss_pred EEECCCC--ccceEEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEE--------
Confidence 9999987 44444444322 123445667766666654 2357999999988763
Q ss_pred hccccccCCCCCeEEE-ecCCCCCCeEEEEEcCCEEEEEecccceEE
Q psy710 296 AIDVCMKTHPGPIIHL-SDNPLDPSKLLLAYETGLVVHWDLKLKRAE 341 (591)
Q Consensus 296 ~~~~~~~~~~~~v~~~-~~sp~~~~~l~~~~~dg~i~iwd~~~~~~~ 341 (591)
.....+|...|.++ +|+| ++++|++|+ |+.|+|||+++++..
T Consensus 392 --~~l~~~~~~~v~s~~~fsp-dg~~lasg~-d~~i~iW~~~~gk~r 434 (435)
T 4e54_B 392 --CQLYDPESSGISSLNEFNP-MGDTLASAM-GYHILIWSQQEARTR 434 (435)
T ss_dssp --EEECCSSCCCCCCEEEECT-TSSCEEEEC-SSEEEECCCC-----
T ss_pred --EEEeCCCCCcEEEEEEECC-CCCEEEEEc-CCcEEEEECCcCeee
Confidence 22345788888887 6999 999999876 789999999987654
No 77
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=1.3e-37 Score=304.58 Aligned_cols=295 Identities=15% Similarity=0.194 Sum_probs=240.9
Q ss_pred eeccCCcceEEEEEeec----CCEEEEecCCCeEEEEeecccCceeeeEEEe-----eccceEEEEeeCC----ceEEEE
Q psy710 43 VRHETDAAVIQMQFLTN----EGALITATADDSLHLWNFRQKRPEIVHSLKF-----QRERITYIHLPLQ----SKWLYV 109 (591)
Q Consensus 43 ~~~~h~~~v~~l~~sp~----~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~-----~~~~v~~~~~~~~----~~~l~~ 109 (591)
...+|..+|.+++|+|+ ...+++++.++.|++||+.+++ .+..+.. |...|.+++|+|+ +++|++
T Consensus 13 ~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~ 90 (366)
T 3k26_A 13 LKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQG--EIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAV 90 (366)
T ss_dssp EECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGG--CEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEE
T ss_pred eecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCc--EEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEE
Confidence 45689999999999984 4566777777899999999774 3455554 4467999999999 779999
Q ss_pred EeCCCcEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECC-CCCEEEEEeCC
Q psy710 110 GTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDP-IQKLLAIGTKT 188 (591)
Q Consensus 110 ~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d 188 (591)
++.|+.|++||+.+++....+. +|...|.+++|+| ++++|++++.|
T Consensus 91 ~~~dg~i~v~d~~~~~~~~~~~---------------------------------~~~~~i~~~~~~~~~~~~l~s~~~d 137 (366)
T 3k26_A 91 AGSRGIIRIINPITMQCIKHYV---------------------------------GHGNAINELKFHPRDPNLLLSVSKD 137 (366)
T ss_dssp EETTCEEEEECTTTCCEEEEEE---------------------------------SCCSCEEEEEECSSCTTEEEEEETT
T ss_pred ecCCCEEEEEEchhceEeeeec---------------------------------CCCCcEEEEEECCCCCCEEEEEeCC
Confidence 9999999999998876655543 5778899999999 89999999999
Q ss_pred CcEEEeCCCCeEEEEec----cCCCcEEEEEEEcCCceEEEEeCCCcEEEEEccCCCcceE-------------------
Q psy710 189 GSLRLLGRPGVDAHVRH----ETDAAVIQMQFLTNEGALITATADDSLHLWNFRQKRPEIV------------------- 245 (591)
Q Consensus 189 g~i~i~d~~~~~~~~~~----~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~------------------- 245 (591)
|.|++||+...+..... .+...|.+++|+|++++|++++.|+.|++||++++ +..
T Consensus 138 g~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~--~~~~~~~~~~~~~~~~~~~~~~ 215 (366)
T 3k26_A 138 HALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSK--RMMNAIKESYDYNPNKTNRPFI 215 (366)
T ss_dssp SCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSH--HHHHHHHHHHTCCGGGCSSCCC
T ss_pred CeEEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCC--ccccccceeEEecCCCCccccc
Confidence 99999999987776553 56789999999999999999999999999999865 222
Q ss_pred ---------EeeeeccccEEEEEecCCCCEEEEEeCCccEEEEEccCccccceeeeh---hhhccccccCCCCCeEEEec
Q psy710 246 ---------HSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINW---NKAIDVCMKTHPGPIIHLSD 313 (591)
Q Consensus 246 ---------~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~---~~~~~~~~~~~~~~v~~~~~ 313 (591)
.....|...|.+++|+ ++++++++.|+.|++||+.+.......... .......+..|...|.+++|
T Consensus 216 ~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 293 (366)
T 3k26_A 216 SQKIHFPDFSTRDIHRNYVDCVRWL--GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRF 293 (366)
T ss_dssp CEEECCCSEEECSSCSSCCCEEEEE--TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCC
T ss_pred ceeeccCccccccCCcceEEEEEEc--CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEE
Confidence 2233488899999998 779999999999999999876542110000 00113356678889999999
Q ss_pred CCCC--CCeEEEEEcCCEEEEEecccce----EEEEec-c--CCCeeEEEEeecCCEEEEEecCCcEEEEecC
Q psy710 314 NPLD--PSKLLLAYETGLVVHWDLKLKR----AEFRWQ-C--SEPIKSVCWHYEGKQFLCSHTDGTISTWAVR 377 (591)
Q Consensus 314 sp~~--~~~l~~~~~dg~i~iwd~~~~~----~~~~~~-~--~~~v~~~~~sp~g~~l~s~~~dg~i~vwd~~ 377 (591)
+| + +++|++++.||.|++||+.+++ ....+. | ...|++++|+|++++|++++.||.|++||+.
T Consensus 294 s~-~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 294 SM-DFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRL 365 (366)
T ss_dssp EE-CTTSSEEEEECTTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred cC-CCCCcEEEEEecCCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEec
Confidence 99 8 9999999999999999999864 333443 4 6899999999999999999999999999986
No 78
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=8.2e-37 Score=288.91 Aligned_cols=251 Identities=9% Similarity=0.119 Sum_probs=210.1
Q ss_pred cccCCCCCCcEEEeCCCCcEEEEEeCCCcEEEEcCCC---ceeEeeccCCcceEEEEEeec--CCEEEEecCCCeEEEEe
Q psy710 2 FRHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPG---VDAHVRHETDAAVIQMQFLTN--EGALITATADDSLHLWN 76 (591)
Q Consensus 2 ~~~gh~~~v~~~~~spdg~~la~g~~dg~i~lw~~~~---~~~~~~~~h~~~v~~l~~sp~--~~~l~s~~~d~~i~vw~ 76 (591)
+..||.+.|++++|+|+|++||+|+.|++|+||++++ ..+..+.+|.++|.+++|+|+ +++|++++.|++|++||
T Consensus 4 ~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd 83 (297)
T 2pm7_B 4 IANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWK 83 (297)
T ss_dssp ECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEE
T ss_pred eccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEE
Confidence 4579999999999999999999999999999999863 456789999999999999864 89999999999999999
Q ss_pred ecccCceeeeEEEeeccceEEEEeeCC--ceEEEEEeCCCcEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCC
Q psy710 77 FRQKRPEIVHSLKFQRERITYIHLPLQ--SKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDN 154 (591)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (591)
+++++...+..+.+|...|.+++|+|+ +++|++++.|+.|++||+.++....
T Consensus 84 ~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~-------------------------- 137 (297)
T 2pm7_B 84 EENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTS-------------------------- 137 (297)
T ss_dssp BSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBC--------------------------
T ss_pred cCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCcee--------------------------
Confidence 998754456777889999999999997 7899999999999999997642110
Q ss_pred CcCcceeeeccCCCCceEEEECCC-------------CCEEEEEeCCCcEEEeCCCCeE----E-EEeccCCCcEEEEEE
Q psy710 155 PLDPSKTFRHGFPYQPTAIAFDPI-------------QKLLAIGTKTGSLRLLGRPGVD----A-HVRHETDAAVIQMQF 216 (591)
Q Consensus 155 ~~~~~~~~~~~~~~~v~~~~~~~~-------------~~~l~~~~~dg~i~i~d~~~~~----~-~~~~~~~~~v~~~~~ 216 (591)
.....+|...|.+++|+|+ +++|++|+.|+.|++||+.... . .....|...|.+++|
T Consensus 138 -----~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~ 212 (297)
T 2pm7_B 138 -----PIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAW 212 (297)
T ss_dssp -----CEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEE
T ss_pred -----eeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEE
Confidence 0111367788999999997 5799999999999999976532 2 234456779999999
Q ss_pred EcCC---ceEEEEeCCCcEEEEEccCCCcc-eEEee--eeccccEEEEEecCCCCEEEEEeCCccEEEEEccC
Q psy710 217 LTNE---GALITATADDSLHLWNFRQKRPE-IVHSL--KFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIES 283 (591)
Q Consensus 217 ~~~~---~~l~~~~~d~~i~~wd~~~~~~~-~~~~~--~~~~~~v~~~~~sp~~~~l~~~~~dg~i~i~d~~~ 283 (591)
+|++ ++|++++.|++|++||++..... ....+ ..|...|.+++|+|++++|++++.|+.|++|+...
T Consensus 213 sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~~ 285 (297)
T 2pm7_B 213 SPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 285 (297)
T ss_dssp CCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEECT
T ss_pred CCCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEECC
Confidence 9985 89999999999999999875322 22233 45678899999999999999999999999999763
No 79
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=5.6e-37 Score=304.85 Aligned_cols=317 Identities=11% Similarity=0.151 Sum_probs=246.6
Q ss_pred CCcEEEEcCC-CceeEeeccCCcceEEEEEee-cCCEEEEecCCCeEEEEeecccCceeeeEE-----------Eeeccc
Q psy710 28 TGSLRLLGRP-GVDAHVRHETDAAVIQMQFLT-NEGALITATADDSLHLWNFRQKRPEIVHSL-----------KFQRER 94 (591)
Q Consensus 28 dg~i~lw~~~-~~~~~~~~~h~~~v~~l~~sp-~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~-----------~~~~~~ 94 (591)
++.+++|+++ +.....+.+|.+.|.+++|+| ++++|++++.||.|++||+.+++....... .+|...
T Consensus 22 ~~~~~v~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (408)
T 4a11_B 22 ESTRRVLGLELNKDRDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYS 101 (408)
T ss_dssp HHHHHHHTEEECTTEEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSC
T ss_pred cCcceeeccccCcceeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCc
Confidence 4567888877 566777889999999999999 999999999999999999998753222111 248899
Q ss_pred eEEEEeeC-CceEEEEEeCCCcEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEE
Q psy710 95 ITYIHLPL-QSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAI 173 (591)
Q Consensus 95 v~~~~~~~-~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 173 (591)
|.+++|+| ++++|++++.|+.|++||+.+++....+. +...+.++
T Consensus 102 v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~----------------------------------~~~~~~~~ 147 (408)
T 4a11_B 102 VETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFN----------------------------------FEETVYSH 147 (408)
T ss_dssp EEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEE----------------------------------CSSCEEEE
T ss_pred EEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceecc----------------------------------CCCceeee
Confidence 99999999 77899999999999999999877655443 45567899
Q ss_pred EECCC---CCEEEEEeCCCcEEEeCCCCeEEEE-eccCCCcEEEEEEEcCCce-EEEEeCCCcEEEEEccCCCcceEEee
Q psy710 174 AFDPI---QKLLAIGTKTGSLRLLGRPGVDAHV-RHETDAAVIQMQFLTNEGA-LITATADDSLHLWNFRQKRPEIVHSL 248 (591)
Q Consensus 174 ~~~~~---~~~l~~~~~dg~i~i~d~~~~~~~~-~~~~~~~v~~~~~~~~~~~-l~~~~~d~~i~~wd~~~~~~~~~~~~ 248 (591)
+++|. +.++++++.+|.|++||+...+... ...+...|.+++|+|+++. |++++.||.|++||++... ..+..+
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~-~~~~~~ 226 (408)
T 4a11_B 148 HMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRAS-GCLITL 226 (408)
T ss_dssp EECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSS-CCSEEC
T ss_pred EeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCC-cccccc
Confidence 99884 4599999999999999998765443 3346779999999999984 8899999999999998763 133333
Q ss_pred ---------------eeccccEEEEEecCCCCEEEEEeCCccEEEEEccCccccceeeehhhhccccccCCCCCeEEEec
Q psy710 249 ---------------KFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSD 313 (591)
Q Consensus 249 ---------------~~~~~~v~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 313 (591)
..|...|.+++|+|++++|++++.||.|++||+.+++...... ..........+.....
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~------~~~~~~~~~~~~~~~~ 300 (408)
T 4a11_B 227 DQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNY------GKVCNNSKKGLKFTVS 300 (408)
T ss_dssp CTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBCCCCC------CCCCCCCSSCCCCEEC
T ss_pred cccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCccceecc------ccccccccccceeEEe
Confidence 5678899999999999999999999999999999876531000 0000111112222222
Q ss_pred CCCCCCeEEEEEcCCEEEEEecccceEEEEec-cCCCeeEEEEeecCCEEEEEecCCcEEEEecCCCCCceeeec
Q psy710 314 NPLDPSKLLLAYETGLVVHWDLKLKRAEFRWQ-CSEPIKSVCWHYEGKQFLCSHTDGTISTWAVRPLAKPVSVNQ 387 (591)
Q Consensus 314 sp~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp~g~~l~s~~~dg~i~vwd~~~~~~~~~~~~ 387 (591)
.. ....+++++.++.|++||+.+++.+..+. |...|++++|+|++++|++++.||.|++||+. .++++....
T Consensus 301 ~~-~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~-~~~~~~~~~ 373 (408)
T 4a11_B 301 CG-CSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQELYSGSRDCNILAWVPS-LYEPVPDDD 373 (408)
T ss_dssp CS-SSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEEEC-C--------
T ss_pred cC-CCceEEEEecCCEEEEEECcCCcceeeeccCCCeEEEEEEcCCCCEEEEECCCCeEEEEeCC-CCCccCCCC
Confidence 23 45677888889999999999999988877 89999999999999999999999999999999 666554433
No 80
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=4.7e-37 Score=305.44 Aligned_cols=323 Identities=14% Similarity=0.138 Sum_probs=229.9
Q ss_pred ccCCCCCCcEEEeCC-CCcEEEEEeCCCcEEEEcCCC-ceeEee-------------ccCCcceEEEEEee-cCCEEEEe
Q psy710 3 RHGFPYQPTAIAFDP-IQKLLAIGTKTGSLRLLGRPG-VDAHVR-------------HETDAAVIQMQFLT-NEGALITA 66 (591)
Q Consensus 3 ~~gh~~~v~~~~~sp-dg~~la~g~~dg~i~lw~~~~-~~~~~~-------------~~h~~~v~~l~~sp-~~~~l~s~ 66 (591)
..+|.+.|++++|+| ++++||+|+.||.|++||+.. .....+ .+|...|.+++|+| ++++|+++
T Consensus 39 ~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~ 118 (408)
T 4a11_B 39 ERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSS 118 (408)
T ss_dssp CCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEE
T ss_pred eeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEE
Confidence 467999999999999 999999999999999999873 222222 25999999999999 67899999
Q ss_pred cCCCeEEEEeecccCceeeeEEEeeccceEEEEeeCC---ceEEEEEeCCCcEEEEEeeeeeeeceecccccccccCCCC
Q psy710 67 TADDSLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQ---SKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKT 143 (591)
Q Consensus 67 ~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~ 143 (591)
+.|+.|++||+.+++ ....+. +...+.++.|++. +..+++++.|+.|++||+.+++....+.
T Consensus 119 ~~d~~i~iwd~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~------------ 183 (408)
T 4a11_B 119 SFDKTLKVWDTNTLQ--TADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQ------------ 183 (408)
T ss_dssp ETTSEEEEEETTTTE--EEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEEC------------
T ss_pred eCCCeEEEeeCCCCc--cceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeec------------
Confidence 999999999999874 455554 6788999999884 4599999999999999998866544433
Q ss_pred CCCceeccCCCCcCcceeeeccCCCCceEEEECCCCC-EEEEEeCCCcEEEeCCCCeEE-E-Ee---------------c
Q psy710 144 HPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQK-LLAIGTKTGSLRLLGRPGVDA-H-VR---------------H 205 (591)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~-~-~~---------------~ 205 (591)
+|...|.+++|+|+++ ++++++.||.|++||+..... . .. .
T Consensus 184 ---------------------~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (408)
T 4a11_B 184 ---------------------GHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANT 242 (408)
T ss_dssp ---------------------CCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSC
T ss_pred ---------------------CCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccc
Confidence 5677899999999998 689999999999999865431 1 11 2
Q ss_pred cCCCcEEEEEEEcCCceEEEEeCCCcEEEEEccCCCcceEEeeeec-----cccEEEEEecCCCCEEEEEeCCccEEEEE
Q psy710 206 ETDAAVIQMQFLTNEGALITATADDSLHLWNFRQKRPEIVHSLKFQ-----RERITYIHLPLQSKWLYVGTEKGNIHVVN 280 (591)
Q Consensus 206 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~-----~~~v~~~~~sp~~~~l~~~~~dg~i~i~d 280 (591)
.+...|.+++|+|++++|++++.|+.|++||+++++ ....+..+ ...+........+..+++++.++.|++||
T Consensus 243 ~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d 320 (408)
T 4a11_B 243 AHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGE--NTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYT 320 (408)
T ss_dssp SCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCC--BCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEE
T ss_pred cccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCc--cceeccccccccccccceeEEecCCCceEEEEecCCEEEEEE
Confidence 456789999999999999999999999999999873 22222211 11222222333455677778899999999
Q ss_pred ccCccccceeeehhhhccccccCCCCCeEEEecCCCCCCeEEEEEcCCEEEEEecccceEEEEeccCCCeeEEEEee-cC
Q psy710 281 IESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKLLLAYETGLVVHWDLKLKRAEFRWQCSEPIKSVCWHY-EG 359 (591)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp-~g 359 (591)
+.+++. ...+.+|...|.+++|+| ++++|++++.||.|++||+.+++.+......... ..+.+ +.
T Consensus 321 ~~~~~~-----------~~~~~~~~~~v~~~~~s~-~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~--~~~~~~~~ 386 (408)
T 4a11_B 321 VYSGEQ-----------ITMLKGHYKTVDCCVFQS-NFQELYSGSRDCNILAWVPSLYEPVPDDDETTTK--SQLNPAFE 386 (408)
T ss_dssp TTTCCE-----------EEEECCCSSCEEEEEEET-TTTEEEEEETTSCEEEEEECC-----------------------
T ss_pred CcCCcc-----------eeeeccCCCeEEEEEEcC-CCCEEEEECCCCeEEEEeCCCCCccCCCCceEec--cccccccc
Confidence 998876 336788999999999999 9999999999999999999998877655432222 22333 33
Q ss_pred CEEEEEecCCcEEEEecC
Q psy710 360 KQFLCSHTDGTISTWAVR 377 (591)
Q Consensus 360 ~~l~s~~~dg~i~vwd~~ 377 (591)
..+.+.+.|+.+++|+..
T Consensus 387 ~~~~~~~~~~~~~~W~~~ 404 (408)
T 4a11_B 387 DAWSSSDEEGGTSAWSHP 404 (408)
T ss_dssp ------------------
T ss_pred eeecccCccCceeecCCc
Confidence 455667789999999876
No 81
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.8e-37 Score=311.36 Aligned_cols=295 Identities=15% Similarity=0.168 Sum_probs=230.6
Q ss_pred ccCCCCCCcEEEeCC-CCcEEEEEeCCCcEEEEcCCC---ce---eEeeccCCcceEEEEEeecCCEEEEecCCCeEEEE
Q psy710 3 RHGFPYQPTAIAFDP-IQKLLAIGTKTGSLRLLGRPG---VD---AHVRHETDAAVIQMQFLTNEGALITATADDSLHLW 75 (591)
Q Consensus 3 ~~gh~~~v~~~~~sp-dg~~la~g~~dg~i~lw~~~~---~~---~~~~~~h~~~v~~l~~sp~~~~l~s~~~d~~i~vw 75 (591)
..+|.+.|++++|+| ++++||+|+.||.|++||+.. .. ......|...|.+++|+|++++|++++.|++|++|
T Consensus 59 ~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vw 138 (437)
T 3gre_A 59 MENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFAVSSKDGQIIVL 138 (437)
T ss_dssp CTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred ccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCEEEEEeCCCEEEEE
Confidence 368999999999999 999999999999999999753 21 12222699999999999999999999999999999
Q ss_pred eec---ccCceeeeEEEe------------eccceEEEE--eeCCceEEEEEeCCCcEEEEEeeeeeeeceecccccccc
Q psy710 76 NFR---QKRPEIVHSLKF------------QRERITYIH--LPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAID 138 (591)
Q Consensus 76 ~~~---~~~~~~~~~~~~------------~~~~v~~~~--~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~ 138 (591)
|++ .++ ....+.. +...+.++. ++++++.|++++.|+.|++||+.+++....+..
T Consensus 139 d~~~~~~~~--~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~------ 210 (437)
T 3gre_A 139 KVNHYQQES--EVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIEN------ 210 (437)
T ss_dssp EEEEEEETT--EEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEEC------
T ss_pred EeccccCCc--eeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEcc------
Confidence 995 442 3333332 234455555 457899999999999999999998776665542
Q ss_pred cCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCCCCEEEEEeCCCcEEEeCCCCeEEEEec--cCCCcEEEEEE
Q psy710 139 VCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGVDAHVRH--ETDAAVIQMQF 216 (591)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~--~~~~~v~~~~~ 216 (591)
..|...|.+++|+|++++|++|+.||.|++||+...+..... .+...|.+++|
T Consensus 211 -------------------------~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~ 265 (437)
T 3gre_A 211 -------------------------SPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEV 265 (437)
T ss_dssp -------------------------CGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEE
T ss_pred -------------------------CCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEe
Confidence 115677899999999999999999999999999988776543 55678999966
Q ss_pred Ec----CCceEEEEeCCCcEEEEEccCCCcceEEeeee--------------------------ccccEEEEEecCCCCE
Q psy710 217 LT----NEGALITATADDSLHLWNFRQKRPEIVHSLKF--------------------------QRERITYIHLPLQSKW 266 (591)
Q Consensus 217 ~~----~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~--------------------------~~~~v~~~~~sp~~~~ 266 (591)
+| ++.+|++++.|+.|++||++++ +.+..+.+ |...|.+++|+ ++++
T Consensus 266 ~~~~s~~~~~l~s~~~dg~i~iwd~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~ 342 (437)
T 3gre_A 266 CQFYGKNSVIVVGGSSKTFLTIWNFVKG--HCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKI 342 (437)
T ss_dssp CTTTCTTEEEEEEESTTEEEEEEETTTT--EEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEE
T ss_pred ccccCCCccEEEEEcCCCcEEEEEcCCC--cEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceE
Confidence 54 6779999999999999999987 56655553 45568888998 7799
Q ss_pred EEEEeCCccEEEEEccCccccceeeeh--------------------------hhhccccccCCCCCeEEEecCCCC--C
Q psy710 267 LYVGTEKGNIHVVNIESFTLSGYIINW--------------------------NKAIDVCMKTHPGPIIHLSDNPLD--P 318 (591)
Q Consensus 267 l~~~~~dg~i~i~d~~~~~~~~~~~~~--------------------------~~~~~~~~~~~~~~v~~~~~sp~~--~ 318 (591)
|++|+.|+.|++||+.+++........ ..........|...|++++|++ + +
T Consensus 343 l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~-~~~~ 421 (437)
T 3gre_A 343 LLTDEATSSIVMFSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCE-VDET 421 (437)
T ss_dssp EEEEGGGTEEEEEETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEE-SSSS
T ss_pred EEecCCCCeEEEEECCCcccceEEecccccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeec-cCCc
Confidence 999999999999999987754211110 0000112334899999999999 6 6
Q ss_pred CeEEEEEcCCEEEEEe
Q psy710 319 SKLLLAYETGLVVHWD 334 (591)
Q Consensus 319 ~~l~~~~~dg~i~iwd 334 (591)
.+|++++.||.|+||+
T Consensus 422 ~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 422 PLLVACDNSGLIGIFQ 437 (437)
T ss_dssp EEEEEEETTSCEEEEC
T ss_pred eEEEEEcCCceEEEeC
Confidence 7999999999999995
No 82
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=1.6e-36 Score=286.97 Aligned_cols=258 Identities=9% Similarity=0.116 Sum_probs=212.6
Q ss_pred EeeccCCcceEEEEEeecCCEEEEecCCCeEEEEeecccCceeeeEEEeeccceEEEEeeCC--ceEEEEEeCCCcEEEE
Q psy710 42 HVRHETDAAVIQMQFLTNEGALITATADDSLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQ--SKWLYVGTEKGNIHVV 119 (591)
Q Consensus 42 ~~~~~h~~~v~~l~~sp~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~vw 119 (591)
..+.+|.+.|++++|+|+|++|++++.|++|++||+.....+.+..+.+|.+.|.+++|+++ +++|++++.|++|++|
T Consensus 3 ~~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iW 82 (297)
T 2pm7_B 3 VIANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIW 82 (297)
T ss_dssp EECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEE
T ss_pred eeccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEE
Confidence 45789999999999999999999999999999999986544567889999999999999864 8899999999999999
Q ss_pred EeeeeeeeceecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCC--CCEEEEEeCCCcEEEeCCC
Q psy710 120 NIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPI--QKLLAIGTKTGSLRLLGRP 197 (591)
Q Consensus 120 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~i~d~~ 197 (591)
|+.+++.... ..+ .+|...|.+++|+|+ +.+|++++.|+.|++||+.
T Consensus 83 d~~~~~~~~~------------------------------~~~-~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~ 131 (297)
T 2pm7_B 83 KEENGRWSQI------------------------------AVH-AVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFK 131 (297)
T ss_dssp EBSSSCBCCC------------------------------EEE-CCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBC
T ss_pred EcCCCceEEE------------------------------EEe-ecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEec
Confidence 9987532111 011 357788999999997 8899999999999999987
Q ss_pred CeE---EEEeccCCCcEEEEEEEcC-------------CceEEEEeCCCcEEEEEccCCCc--ceEEeeeeccccEEEEE
Q psy710 198 GVD---AHVRHETDAAVIQMQFLTN-------------EGALITATADDSLHLWNFRQKRP--EIVHSLKFQRERITYIH 259 (591)
Q Consensus 198 ~~~---~~~~~~~~~~v~~~~~~~~-------------~~~l~~~~~d~~i~~wd~~~~~~--~~~~~~~~~~~~v~~~~ 259 (591)
... ......+...|.+++|+|+ +++|++++.|+.|++||+++... .....+.+|...|.+++
T Consensus 132 ~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~ 211 (297)
T 2pm7_B 132 ENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVA 211 (297)
T ss_dssp SSSCBCCEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEE
T ss_pred CCCceeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEE
Confidence 542 2334456679999999997 56899999999999999987631 25667889999999999
Q ss_pred ecCCC---CEEEEEeCCccEEEEEccCccccceeeehhhhccccccCCCCCeEEEecCCCCCCeEEEEEcCCEEEEEecc
Q psy710 260 LPLQS---KWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKLLLAYETGLVVHWDLK 336 (591)
Q Consensus 260 ~sp~~---~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~iwd~~ 336 (591)
|+|++ ++|++++.|++|++||+++....... .......|...|.+++|+| ++++|++++.|+.|++|+..
T Consensus 212 ~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~------~~~~~~~~~~~v~~~~~s~-~g~~las~~~D~~v~lw~~~ 284 (297)
T 2pm7_B 212 WSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKK------TLLKEEKFPDVLWRASWSL-SGNVLALSGGDNKVTLWKEN 284 (297)
T ss_dssp ECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEE------EESSSSCCSSCEEEEEECS-SSCCEEEEETTSCEEEEEEC
T ss_pred ECCCCCCceEEEEEECCCcEEEEEeCCCCCccce------eeeecccCCCcEEEEEECC-CCCEEEEEcCCCcEEEEEEC
Confidence 99984 89999999999999999874321000 0112256788999999999 99999999999999999986
Q ss_pred c
Q psy710 337 L 337 (591)
Q Consensus 337 ~ 337 (591)
.
T Consensus 285 ~ 285 (297)
T 2pm7_B 285 L 285 (297)
T ss_dssp T
T ss_pred C
Confidence 3
No 83
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.3e-36 Score=301.06 Aligned_cols=288 Identities=14% Similarity=0.190 Sum_probs=233.1
Q ss_pred CCCCCC--cEEEeCCCCcEEEEEeCCCcEEEEcCC-CceeEeecc-CCcceEEEEEeecCCEEEEecCCCeEEEEeeccc
Q psy710 5 GFPYQP--TAIAFDPIQKLLAIGTKTGSLRLLGRP-GVDAHVRHE-TDAAVIQMQFLTNEGALITATADDSLHLWNFRQK 80 (591)
Q Consensus 5 gh~~~v--~~~~~spdg~~la~g~~dg~i~lw~~~-~~~~~~~~~-h~~~v~~l~~sp~~~~l~s~~~d~~i~vw~~~~~ 80 (591)
+|...+ .+++|++ ..+++++.||.|++|++. +.....+.. |...|.+++|+|++++|++++.||.|++||+.++
T Consensus 89 ~~~~~~~~~~~~~s~--~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~ 166 (401)
T 4aez_A 89 GIIDDYYLNLLDWSN--LNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQ 166 (401)
T ss_dssp TCCCCTTCBCEEECT--TSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTC
T ss_pred CCcCCceEEEEeecC--CCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCC
Confidence 555554 4455554 557788899999999988 444444443 8899999999999999999999999999999987
Q ss_pred CceeeeEEEeeccceEEEEeeCCceEEEEEeCCCcEEEEEeee-eeeeceecccccccccCCCCCCCceeccCCCCcCcc
Q psy710 81 RPEIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIES-FTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPS 159 (591)
Q Consensus 81 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (591)
+ .+..+.+|...|.+++| +++.+++++.|+.|++||+.. ......+
T Consensus 167 ~--~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~----------------------------- 213 (401)
T 4aez_A 167 T--KLRTMAGHQARVGCLSW--NRHVLSSGSRSGAIHHHDVRIANHQIGTL----------------------------- 213 (401)
T ss_dssp C--EEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEE-----------------------------
T ss_pred e--EEEEecCCCCceEEEEE--CCCEEEEEcCCCCEEEEecccCcceeeEE-----------------------------
Confidence 4 67888899999999999 467999999999999999984 2222222
Q ss_pred eeeeccCCCCceEEEECCCCCEEEEEeCCCcEEEeCCCCeEEEE-eccCCCcEEEEEEEcCCce-EEEEe--CCCcEEEE
Q psy710 160 KTFRHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGVDAHV-RHETDAAVIQMQFLTNEGA-LITAT--ADDSLHLW 235 (591)
Q Consensus 160 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~-~~~~~~~v~~~~~~~~~~~-l~~~~--~d~~i~~w 235 (591)
.+|...|.+++|+|++++|++++.||.|++||+...+... ...+...|.+++|+|++.. +++++ .|+.|++|
T Consensus 214 ----~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~ 289 (401)
T 4aez_A 214 ----QGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFW 289 (401)
T ss_dssp ----ECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEE
T ss_pred ----cCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEE
Confidence 3577889999999999999999999999999998776554 3456779999999998764 45544 69999999
Q ss_pred EccCCCcceEEeeeeccccEEEEEecCCCCEEEE--EeCCccEEEEEccCccccceeeehhhhccccccCCCCCeEEEec
Q psy710 236 NFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYV--GTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSD 313 (591)
Q Consensus 236 d~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~--~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 313 (591)
|++++ +.+..+. +...+.+++|+|+++++++ |+.||.|++||+.+.+... ...+.+|...|.+++|
T Consensus 290 d~~~~--~~~~~~~-~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~---------~~~~~~h~~~v~~~~~ 357 (401)
T 4aez_A 290 NAATG--ARVNTVD-AGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTK---------QVDIPAHDTRVLYSAL 357 (401)
T ss_dssp ETTTC--CEEEEEE-CSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEE---------EEEEECCSSCCCEEEE
T ss_pred ECCCC--CEEEEEe-CCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCcccee---------EEEecCCCCCEEEEEE
Confidence 99988 6777775 4478999999999999998 4489999999999865431 2245789999999999
Q ss_pred CCCCCCeEEEEEcCCEEEEEecccceEEEEe
Q psy710 314 NPLDPSKLLLAYETGLVVHWDLKLKRAEFRW 344 (591)
Q Consensus 314 sp~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 344 (591)
+| ++.+|++++.||.|++||+.+++.....
T Consensus 358 s~-dg~~l~s~~~dg~i~iw~~~~~~~~~~~ 387 (401)
T 4aez_A 358 SP-DGRILSTAASDENLKFWRVYDGDHVKRP 387 (401)
T ss_dssp CT-TSSEEEEECTTSEEEEEECCC-------
T ss_pred CC-CCCEEEEEeCCCcEEEEECCCCcccccc
Confidence 99 9999999999999999999998776543
No 84
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.7e-36 Score=298.64 Aligned_cols=291 Identities=11% Similarity=0.146 Sum_probs=233.0
Q ss_pred cCCcceEEEEEeecCCEEEEecCCCeEEEEeecccCceeeeEEEe-eccceEEEEeeCCceEEEEEeCCCcEEEEEeeee
Q psy710 46 ETDAAVIQMQFLTNEGALITATADDSLHLWNFRQKRPEIVHSLKF-QRERITYIHLPLQSKWLYVGTEKGNIHVVNIESF 124 (591)
Q Consensus 46 ~h~~~v~~l~~sp~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~ 124 (591)
+|...+....+++++..+++++.|+.|++||+.+++ ....+.. |...|.+++|+|++++|++++.||.|++||+.++
T Consensus 89 ~~~~~~~~~~~~~s~~~l~~~~~d~~v~lw~~~~~~--~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~ 166 (401)
T 4aez_A 89 GIIDDYYLNLLDWSNLNVVAVALERNVYVWNADSGS--VSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQ 166 (401)
T ss_dssp TCCCCTTCBCEEECTTSEEEEEETTEEEEEETTTCC--EEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTC
T ss_pred CCcCCceEEEEeecCCCEEEEECCCeEEEeeCCCCc--EeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCC
Confidence 455443333334444668888899999999999885 3444444 7889999999999999999999999999999887
Q ss_pred eeeceecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCCCCEEEEEeCCCcEEEeCCCC--eEEE
Q psy710 125 TLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPG--VDAH 202 (591)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~--~~~~ 202 (591)
+....+. +|...|.+++| +++++++++.||.|++||+.. ....
T Consensus 167 ~~~~~~~---------------------------------~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~ 211 (401)
T 4aez_A 167 TKLRTMA---------------------------------GHQARVGCLSW--NRHVLSSGSRSGAIHHHDVRIANHQIG 211 (401)
T ss_dssp CEEEEEC---------------------------------CCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEE
T ss_pred eEEEEec---------------------------------CCCCceEEEEE--CCCEEEEEcCCCCEEEEecccCcceee
Confidence 6655543 56778899999 467899999999999999873 3334
Q ss_pred EeccCCCcEEEEEEEcCCceEEEEeCCCcEEEEEccCCCcceEEeeeeccccEEEEEecCCCC-EEEEEe--CCccEEEE
Q psy710 203 VRHETDAAVIQMQFLTNEGALITATADDSLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQSK-WLYVGT--EKGNIHVV 279 (591)
Q Consensus 203 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~sp~~~-~l~~~~--~dg~i~i~ 279 (591)
....+...|.+++|+|++++|++++.|+.|++||+++. ..+..+..|...|.+++|+|++. ++++++ .|+.|++|
T Consensus 212 ~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~--~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~ 289 (401)
T 4aez_A 212 TLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSS--IPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFW 289 (401)
T ss_dssp EEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCS--SEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEE
T ss_pred EEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCC--CccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEE
Confidence 45556779999999999999999999999999999987 78888888999999999999775 555554 79999999
Q ss_pred EccCccccceeeehhhhccccccCCCCCeEEEecCCCCCCeEEEEE--cCCEEEEEecccceEEEEe---ccCCCeeEEE
Q psy710 280 NIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKLLLAY--ETGLVVHWDLKLKRAEFRW---QCSEPIKSVC 354 (591)
Q Consensus 280 d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~--~dg~i~iwd~~~~~~~~~~---~~~~~v~~~~ 354 (591)
|+.+++... .+ .+...|.+++|+| +++++++++ .||.|++||+.+++..... .|...|.+++
T Consensus 290 d~~~~~~~~-----------~~-~~~~~v~~~~~s~-~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~ 356 (401)
T 4aez_A 290 NAATGARVN-----------TV-DAGSQVTSLIWSP-HSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSA 356 (401)
T ss_dssp ETTTCCEEE-----------EE-ECSSCEEEEEECS-SSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEE
T ss_pred ECCCCCEEE-----------EE-eCCCcEEEEEECC-CCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEE
Confidence 999876631 22 3567899999999 999999954 8999999999997665543 4889999999
Q ss_pred EeecCCEEEEEecCCcEEEEecCCCCCceeeeccc
Q psy710 355 WHYEGKQFLCSHTDGTISTWAVRPLAKPVSVNQPH 389 (591)
Q Consensus 355 ~sp~g~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~ 389 (591)
|+|++++|++++.||.|++|++. .++.+.....+
T Consensus 357 ~s~dg~~l~s~~~dg~i~iw~~~-~~~~~~~~~~~ 390 (401)
T 4aez_A 357 LSPDGRILSTAASDENLKFWRVY-DGDHVKRPIPI 390 (401)
T ss_dssp ECTTSSEEEEECTTSEEEEEECC-C----------
T ss_pred ECCCCCEEEEEeCCCcEEEEECC-CCccccccccc
Confidence 99999999999999999999999 66665544333
No 85
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.2e-38 Score=315.32 Aligned_cols=328 Identities=10% Similarity=0.058 Sum_probs=232.5
Q ss_pred CCcceEEEEEeecC---------CEEEE-------------------ecCCCeEEEEeecccCcee--eeEEEeeccceE
Q psy710 47 TDAAVIQMQFLTNE---------GALIT-------------------ATADDSLHLWNFRQKRPEI--VHSLKFQRERIT 96 (591)
Q Consensus 47 h~~~v~~l~~sp~~---------~~l~s-------------------~~~d~~i~vw~~~~~~~~~--~~~~~~~~~~v~ 96 (591)
+.+.|.+++|+|++ ++||+ ++.|++|+||++.+++... ...+..|.+.|.
T Consensus 132 ~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~ 211 (524)
T 2j04_B 132 VGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVW 211 (524)
T ss_dssp CCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCEEEEEEEEECCCSEE
T ss_pred CCCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCceEEEEEEecCCcEE
Confidence 56788888888876 56655 5578999999998775221 245677788999
Q ss_pred EEEeeCC------ceEEEEEeCCCcEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCc
Q psy710 97 YIHLPLQ------SKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQP 170 (591)
Q Consensus 97 ~~~~~~~------~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 170 (591)
+++|+|+ +.+|++++.||+|++||+.++........ ....+...+ .+|...|
T Consensus 212 ~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~---------------------~~~~p~~~l-~~h~~~v 269 (524)
T 2j04_B 212 DLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFK---------------------MCEKPSLTL-SLADSLI 269 (524)
T ss_dssp EEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEE---------------------CCCSCSEEE-CCTTTCE
T ss_pred EEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccce---------------------eecCceEEE-EcCCCCE
Confidence 9999996 57999999999999999986532100000 000111122 3678889
Q ss_pred eEEEECCCCCEEEEEeCCCcEEEeCCCCeE--EEEeccCCCcEEEE--EEEcCC-ceEEEEeCCCcEEEEEccCCCcceE
Q psy710 171 TAIAFDPIQKLLAIGTKTGSLRLLGRPGVD--AHVRHETDAAVIQM--QFLTNE-GALITATADDSLHLWNFRQKRPEIV 245 (591)
Q Consensus 171 ~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~--~~~~~~~~~~v~~~--~~~~~~-~~l~~~~~d~~i~~wd~~~~~~~~~ 245 (591)
.+++|++++ .|++|+.||+|++||+.+.. ......|...|.++ .|+|++ ++|++++.|++|++||+++. ++.
T Consensus 270 ~sv~~s~~~-~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~--~~~ 346 (524)
T 2j04_B 270 TTFDFLSPT-TVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDI--ATT 346 (524)
T ss_dssp EEEEESSSS-EEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGH--HHH
T ss_pred EEEEecCCC-eEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCC--Ccc
Confidence 999999864 79999999999999998542 22344566799999 578887 89999999999999999876 455
Q ss_pred Eeeeeccc--cEEEEEecCCCCEEEEEeCCccEEEEEccCccccceeeehhhhccccccCCCCCeEEEecCCCCCCeEEE
Q psy710 246 HSLKFQRE--RITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKLLL 323 (591)
Q Consensus 246 ~~~~~~~~--~v~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~ 323 (591)
..+.+|.. .|.+++|+|+++.+++++.|++|++||++++... ..+.+|.+.|++++|+| ++++|++
T Consensus 347 ~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~-----------~~l~gH~~~V~sva~Sp-~g~~l~S 414 (524)
T 2j04_B 347 KTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAV-----------HPLVSRETTITAIGVSR-LHPMVLA 414 (524)
T ss_dssp CEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCC-----------EEEEECSSCEEEEECCS-SCCBCEE
T ss_pred cccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccc-----------eeeecCCCceEEEEeCC-CCCeEEE
Confidence 55556543 4789999999999999999999999999987652 25678999999999999 9999999
Q ss_pred EEcCCEEEEEecccceEEEE-----eccCCCeeEEEEeecCCEEEEEecCCcEEEEecCCCCCceeeecccccccCCCCC
Q psy710 324 AYETGLVVHWDLKLKRAEFR-----WQCSEPIKSVCWHYEGKQFLCSHTDGTISTWAVRPLAKPVSVNQPHIKTNKDGKL 398 (591)
Q Consensus 324 ~~~dg~i~iwd~~~~~~~~~-----~~~~~~v~~~~~sp~g~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~ 398 (591)
|+.|++|++||+..+..... ..+...+.+++|+|+++.+. ... .+++|+...++.++..+.+|
T Consensus 415 gs~Dgtv~lwd~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~~~-~~~--~~~~~~~~~~g~~~~~l~gh--------- 482 (524)
T 2j04_B 415 GSADGSLIITNAARRLLHGIKNSSATQKSLRLWKWDYSIKDDKYR-IDS--SYEVYPLTVNDVSKAKIDAH--------- 482 (524)
T ss_dssp EETTTEEECCBSCSSTTTCC------CCCCEEEECBCCSSSCEEE-ECC--CCCCCC-------------C---------
T ss_pred EECCCEEEEEechHhhccccccCccceeeeEEEEeccCCCCCeEE-ccC--CceecccccCCcceeeecCC---------
Confidence 99999999999876422110 01122477999999998553 222 34455443346788889999
Q ss_pred CCCCcceEEEEeecCCCCcEEEEECCcc
Q psy710 399 EQCKPIQKVEWKHSRSGEGFVIFSGGLT 426 (591)
Q Consensus 399 ~~~~~i~~~~~~~~~~~~~~~l~~g~~~ 426 (591)
..+|.+|+|+|..+ .+.++++|+.+
T Consensus 483 --~~~V~~Vafsp~~~-~~~~lAsg~~~ 507 (524)
T 2j04_B 483 --GINITCTKWNETSA-GGKCYAFSNSA 507 (524)
T ss_dssp --CCSCCCEEECCSTT-TTTEEEEECTT
T ss_pred --CceEEEEECCCCCC-ccHHHHhhccC
Confidence 89999999998332 25688888754
No 86
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-35 Score=290.42 Aligned_cols=283 Identities=13% Similarity=0.158 Sum_probs=249.4
Q ss_pred eeeeEEEeeccceEEEEeeCCceEEEEEeCCCcEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCcceee
Q psy710 83 EIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTF 162 (591)
Q Consensus 83 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (591)
.....+.+|...|++++|+|++++|++++.|+.|++||+.+++....+.
T Consensus 23 ~~~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~------------------------------- 71 (369)
T 3zwl_B 23 MKAIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLD------------------------------- 71 (369)
T ss_dssp EEEEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEEC-------------------------------
T ss_pred cccEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhh-------------------------------
Confidence 4556788999999999999999999999999999999998877665554
Q ss_pred eccCCCCceEEEECCCCCEEEEEeCCCcEEEeCCCCeEEEEeccCCCcEEEEEEEcCCceEEEEeCC-----CcEEEEEc
Q psy710 163 RHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGVDAHVRHETDAAVIQMQFLTNEGALITATAD-----DSLHLWNF 237 (591)
Q Consensus 163 ~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~~wd~ 237 (591)
+|...|.+++|+|++++|++++.||.|++||+.+.+......+...+.+++|+|++++|++++.+ +.|++||+
T Consensus 72 --~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~ 149 (369)
T 3zwl_B 72 --GHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATWKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEI 149 (369)
T ss_dssp --CCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEE
T ss_pred --hcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEe
Confidence 56778999999999999999999999999999988877766677899999999999999999998 99999999
Q ss_pred cCCCc---------ceEEeeeeccc--cEEEEEecCCCCEEEEEeCCccEEEEEccC-ccccceeeehhhhccccccCCC
Q psy710 238 RQKRP---------EIVHSLKFQRE--RITYIHLPLQSKWLYVGTEKGNIHVVNIES-FTLSGYIINWNKAIDVCMKTHP 305 (591)
Q Consensus 238 ~~~~~---------~~~~~~~~~~~--~v~~~~~sp~~~~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~~~~~~~~~~~ 305 (591)
..... .....+..+.. .+.+++|+|+++++++++.||.|++||+.+ .+. ...+..|.
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-----------~~~~~~~~ 218 (369)
T 3zwl_B 150 ERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEY-----------VDSIDLHE 218 (369)
T ss_dssp EECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEE-----------EEEEECCS
T ss_pred cCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEe-----------EEEEecCC
Confidence 86531 12334445545 899999999999999999999999999988 343 33667789
Q ss_pred CCeEEEecCCCCCCeEEEEEcCCEEEEEecccceEEEEeccCCCeeEEEEeecCCEEEEEecCC--------------cE
Q psy710 306 GPIIHLSDNPLDPSKLLLAYETGLVVHWDLKLKRAEFRWQCSEPIKSVCWHYEGKQFLCSHTDG--------------TI 371 (591)
Q Consensus 306 ~~v~~~~~sp~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~g~~l~s~~~dg--------------~i 371 (591)
..|.+++|+| ++++|++++.|+.|++||+.+++....+.+...+.+++|+|+++++++++.++ .+
T Consensus 219 ~~v~~~~~~~-~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i 297 (369)
T 3zwl_B 219 KSISDMQFSP-DLTYFITSSRDTNSFLVDVSTLQVLKKYETDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEA 297 (369)
T ss_dssp SCEEEEEECT-TSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECCC-------------CEE
T ss_pred CceeEEEECC-CCCEEEEecCCceEEEEECCCCceeeeecCCCCceeEEecCCCceEEEeecCCCceEEEEecCCCccee
Confidence 9999999999 99999999999999999999999999999999999999999999999999988 89
Q ss_pred EEEecCCCCCceeeecccccccCCCCCCCCCcceEEEEeecCCCCcEEEEECCcc
Q psy710 372 STWAVRPLAKPVSVNQPHIKTNKDGKLEQCKPIQKVEWKHSRSGEGFVIFSGGLT 426 (591)
Q Consensus 372 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~g~~~ 426 (591)
++||+. .++++..+.+| ..+|.+++|+| ++.+|++|+.+
T Consensus 298 ~~~d~~-~~~~~~~~~~~-----------~~~v~~~~~s~----~~~~l~s~~~d 336 (369)
T 3zwl_B 298 RFYHKI-FEEEIGRVQGH-----------FGPLNTVAISP----QGTSYASGGED 336 (369)
T ss_dssp EEEETT-TCCEEEEEECC-----------SSCEEEEEECT----TSSEEEEEETT
T ss_pred EEEecC-CCcchhheecc-----------cCcEEEEEECC----CCCEEEEEcCC
Confidence 999999 78899999999 89999999987 45577777754
No 87
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=4.4e-36 Score=302.32 Aligned_cols=315 Identities=11% Similarity=0.133 Sum_probs=236.8
Q ss_pred cCCcceEEEEEeecCCEEEEecCCCeEEEEeecccCc---------eeeeEEEeec------------cceEEEEeeCCc
Q psy710 46 ETDAAVIQMQFLTNEGALITATADDSLHLWNFRQKRP---------EIVHSLKFQR------------ERITYIHLPLQS 104 (591)
Q Consensus 46 ~h~~~v~~l~~sp~~~~l~s~~~d~~i~vw~~~~~~~---------~~~~~~~~~~------------~~v~~~~~~~~~ 104 (591)
.|.+.|.+++|+|++++|++|+.||.|++|++.+++. .....+.+|. ..|.+++|+|++
T Consensus 26 ~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~ 105 (447)
T 3dw8_B 26 AEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQK 105 (447)
T ss_dssp CGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCC
T ss_pred cccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCC
Confidence 4678999999999999999999999999999987641 1467888898 889999999998
Q ss_pred --eEEEEEeCCCcEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCCC---------cCcceeeeccCCCCceEE
Q psy710 105 --KWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNP---------LDPSKTFRHGFPYQPTAI 173 (591)
Q Consensus 105 --~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~v~~~ 173 (591)
..|++++.|+.|++||+.+++................ .......+.... ..+.+.+..+|...|.++
T Consensus 106 ~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~ 183 (447)
T 3dw8_B 106 NAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYR--DPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSI 183 (447)
T ss_dssp SSSEEEEEECSSCEEEEEEEEEEEEEECCSCC----------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEE
T ss_pred CcceEEEeCCCCeEEEEecccccCCcceecccCcccccc--CcccccceEeccccchheeeeccceEEeccCCCcceEEE
Confidence 7899999999999999998765422111110000000 000000000000 011223345789999999
Q ss_pred EECCCCCEEEEEeCCCcEEEeCCCC-eEEEE--------eccCCCcEEEEEEEcCC-ceEEEEeCCCcEEEEEccCCCc-
Q psy710 174 AFDPIQKLLAIGTKTGSLRLLGRPG-VDAHV--------RHETDAAVIQMQFLTNE-GALITATADDSLHLWNFRQKRP- 242 (591)
Q Consensus 174 ~~~~~~~~l~~~~~dg~i~i~d~~~-~~~~~--------~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~~wd~~~~~~- 242 (591)
+|+|++++|++| .|+.|++||+.. ..... ...+...|.+++|+|++ ++|++++.|+.|++||++++..
T Consensus 184 ~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~ 262 (447)
T 3dw8_B 184 SINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALC 262 (447)
T ss_dssp EECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSS
T ss_pred EEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccc
Confidence 999999999998 799999999984 33333 23557789999999998 8999999999999999998731
Q ss_pred -ceEEeeeeccc------------cEEEEEecCCCCEEEEEeCCccEEEEEccC-ccccceeeehhhhccccccCCCC--
Q psy710 243 -EIVHSLKFQRE------------RITYIHLPLQSKWLYVGTEKGNIHVVNIES-FTLSGYIINWNKAIDVCMKTHPG-- 306 (591)
Q Consensus 243 -~~~~~~~~~~~------------~v~~~~~sp~~~~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~~~~~~~~~~~~-- 306 (591)
..+..+..|.. .|.+++|+|++++|++++. +.|++||+++ ++.. ..+..|..
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~-----------~~~~~~~~~~ 330 (447)
T 3dw8_B 263 DRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPV-----------ETYQVHEYLR 330 (447)
T ss_dssp CTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCS-----------CCEESCGGGT
T ss_pred cceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCcccc-----------ceeecccccc
Confidence 01567777765 8999999999999999998 9999999987 5442 23444432
Q ss_pred -------------CeEEEecCCCCCCeEEEEEcCCEEEEEecccceEEEEec----------------------------
Q psy710 307 -------------PIIHLSDNPLDPSKLLLAYETGLVVHWDLKLKRAEFRWQ---------------------------- 345 (591)
Q Consensus 307 -------------~v~~~~~sp~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~---------------------------- 345 (591)
.+..++|+| ++++|++++.||.|++||+.+++......
T Consensus 331 ~~l~~~~~~~~i~~~~~~~~s~-~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (447)
T 3dw8_B 331 SKLCSLYENDCIFDKFECCWNG-SDSVVMTGSYNNFFRMFDRNTKRDITLEASRENNKPRTVLKPRKVCASGKRKKDEIS 409 (447)
T ss_dssp TTHHHHHHTSGGGCCCCEEECT-TSSEEEEECSTTEEEEEETTTCCEEEEECCSTTCCTTCBCCCCCEECSSCCCTTCEE
T ss_pred ccccccccccccccceEEEECC-CCCEEEEeccCCEEEEEEcCCCcceeeeecccccccccccCCccccccCCccccccc
Confidence 133599999 99999999999999999999988765332
Q ss_pred -----cCCCeeEEEEeecCCEEEEEecCCcEEEEecC
Q psy710 346 -----CSEPIKSVCWHYEGKQFLCSHTDGTISTWAVR 377 (591)
Q Consensus 346 -----~~~~v~~~~~sp~g~~l~s~~~dg~i~vwd~~ 377 (591)
....|.+++|+|++++||+++.++ +++|.-+
T Consensus 410 ~~~~~~~~~i~~~~~~p~~~~la~~~~~~-~~~~~~~ 445 (447)
T 3dw8_B 410 VDSLDFNKKILHTAWHPKENIIAVATTNN-LYIFQDK 445 (447)
T ss_dssp GGGCCTTSCCCEEEECSSSSEEEEECSSC-EEEEECC
T ss_pred ccccccCCceeEEEECCCCCEEEEEecce-eeeeccc
Confidence 245688999999999999998876 8888754
No 88
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=4.4e-36 Score=290.87 Aligned_cols=279 Identities=13% Similarity=0.123 Sum_probs=238.5
Q ss_pred cccCCCCCCcEEEeCCCCcEEEEEeCCCcEEEEcCCCce----eEeeccCCcceEEEEEeecCC-EEEEecCCCeEEEEe
Q psy710 2 FRHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGVD----AHVRHETDAAVIQMQFLTNEG-ALITATADDSLHLWN 76 (591)
Q Consensus 2 ~~~gh~~~v~~~~~spdg~~la~g~~dg~i~lw~~~~~~----~~~~~~h~~~v~~l~~sp~~~-~l~s~~~d~~i~vw~ 76 (591)
+..+|.+.|++++|+|++++|++++.||.|++|++.... ...+..|...|.+++|+|+++ +|++++.|+.|++||
T Consensus 6 ~~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd 85 (342)
T 1yfq_A 6 IEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVD 85 (342)
T ss_dssp CSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEEC
T ss_pred cccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEE
Confidence 356899999999999999999999999999999987443 666779999999999999999 999999999999999
Q ss_pred e-cccCceeeeEEEe--eccceEEEEeeCCceEEEEEeCCCcEEEEEeee---------eeeeceecccccccccCCCCC
Q psy710 77 F-RQKRPEIVHSLKF--QRERITYIHLPLQSKWLYVGTEKGNIHVVNIES---------FTLSGYIINWNKAIDVCMKTH 144 (591)
Q Consensus 77 ~-~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~---------~~~~~~~~~~~~~~~~~~~~~ 144 (591)
+ .+++ ...+.. |...|.+++|+| ++.+++++.|+.|++||+.+ ++....+
T Consensus 86 ~~~~~~---~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-------------- 147 (342)
T 1yfq_A 86 LIGSPS---FQALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNT-------------- 147 (342)
T ss_dssp SSSSSS---EEECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSS--------------
T ss_pred eccCCc---eEeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEE--------------
Confidence 9 8774 467778 999999999999 99999999999999999986 4322221
Q ss_pred CCceeccCCCCcCcceeeeccCCCCceEEEECCCCCEEEEEeCCCcEEEeCCCC-eE---EEEeccCCCcEEEEEEEc-C
Q psy710 145 PGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPG-VD---AHVRHETDAAVIQMQFLT-N 219 (591)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~-~~---~~~~~~~~~~v~~~~~~~-~ 219 (591)
.+...+.+++|+|++ +++++.++.|++||+.. .. ......+...+.+++|+| +
T Consensus 148 --------------------~~~~~v~~~~~~~~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~ 205 (342)
T 1yfq_A 148 --------------------KVKNKIFTMDTNSSR--LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKE 205 (342)
T ss_dssp --------------------SSCCCEEEEEECSSE--EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGG
T ss_pred --------------------eeCCceEEEEecCCc--EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCC
Confidence 256778999999987 99999999999999887 32 223445567999999999 9
Q ss_pred CceEEEEeCCCcEEEEEccCC--C--cceEEeeeeccc---------cEEEEEecCCCCEEEEEeCCccEEEEEccCccc
Q psy710 220 EGALITATADDSLHLWNFRQK--R--PEIVHSLKFQRE---------RITYIHLPLQSKWLYVGTEKGNIHVVNIESFTL 286 (591)
Q Consensus 220 ~~~l~~~~~d~~i~~wd~~~~--~--~~~~~~~~~~~~---------~v~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~ 286 (591)
++++++++.||.|++|+++.. . .+....+..|.. .|.+++|+|++++|++++.||.|++||+.+++.
T Consensus 206 ~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~ 285 (342)
T 1yfq_A 206 QEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKK 285 (342)
T ss_dssp GCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEE
T ss_pred CCEEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhH
Confidence 999999999999999999765 1 145566776654 999999999999999999999999999998876
Q ss_pred cceeeehhhhccccccCC-CCCeEEEecCCCCCCeEEEEEcCCE-EEEEe
Q psy710 287 SGYIINWNKAIDVCMKTH-PGPIIHLSDNPLDPSKLLLAYETGL-VVHWD 334 (591)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~-~~~v~~~~~sp~~~~~l~~~~~dg~-i~iwd 334 (591)
. ..+..| ...|.+++ | ++++|++++.||. .+.|.
T Consensus 286 ~-----------~~~~~~h~~~v~~~~--~-~~~~l~s~s~Dg~~~~~~~ 321 (342)
T 1yfq_A 286 I-----------KNFAKFNEDSVVKIA--C-SDNILCLATSDDTFKTNAA 321 (342)
T ss_dssp E-----------EECCCCSSSEEEEEE--E-CSSEEEEEEECTHHHHCSS
T ss_pred h-----------hhhhcccCCCceEec--C-CCCeEEEEecCCccccccc
Confidence 3 367777 99999999 8 9999999999998 55544
No 89
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=9.3e-36 Score=296.63 Aligned_cols=280 Identities=15% Similarity=0.235 Sum_probs=232.5
Q ss_pred CcEEEeCCCCcEEEEEeCCCcEEEEcCC-CceeEe--eccCCcceEEEEEeecCCEEEEecCCCeEEEEeecccCceeee
Q psy710 10 PTAIAFDPIQKLLAIGTKTGSLRLLGRP-GVDAHV--RHETDAAVIQMQFLTNEGALITATADDSLHLWNFRQKRPEIVH 86 (591)
Q Consensus 10 v~~~~~spdg~~la~g~~dg~i~lw~~~-~~~~~~--~~~h~~~v~~l~~sp~~~~l~s~~~d~~i~vw~~~~~~~~~~~ 86 (591)
.+.|+||++ ++||+|. |++|+|||.. +..... +.+|...|++++|+|+|++|++|+.|++|++||++++ +.+.
T Consensus 108 ~~~l~wS~~-n~lAvgl-d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~--~~~~ 183 (420)
T 4gga_A 108 LNLVDWSSG-NVLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQ--KRLR 183 (420)
T ss_dssp CBCEEECTT-SEEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTT--EEEE
T ss_pred ceeEEECCC-CEEEEEe-CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCC--cEEE
Confidence 567999986 5888875 8999999988 444444 4577889999999999999999999999999999987 5788
Q ss_pred EEEeeccceEEEEeeCCceEEEEEeCCCcEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCcceeeeccC
Q psy710 87 SLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGF 166 (591)
Q Consensus 87 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (591)
.+.+|...+.+++++ +..+++|+.|+.+++||....... ...+ .+|
T Consensus 184 ~~~~h~~~v~~~s~~--~~~l~sgs~d~~i~~~d~~~~~~~-------------------------------~~~~-~~h 229 (420)
T 4gga_A 184 NMTSHSARVGSLSWN--SYILSSGSRSGHIHHHDVRVAEHH-------------------------------VATL-SGH 229 (420)
T ss_dssp EECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCE-------------------------------EEEE-ECC
T ss_pred EEeCCCCceEEEeeC--CCEEEEEeCCCceeEeeeccccee-------------------------------eEEe-ccc
Confidence 999999999988774 679999999999999998763211 1111 367
Q ss_pred CCCceEEEECCCCCEEEEEeCCCcEEEeCCCCeE-----EEEeccCCCcEEEEEEEcCCce-EEE--EeCCCcEEEEEcc
Q psy710 167 PYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGVD-----AHVRHETDAAVIQMQFLTNEGA-LIT--ATADDSLHLWNFR 238 (591)
Q Consensus 167 ~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~-----~~~~~~~~~~v~~~~~~~~~~~-l~~--~~~d~~i~~wd~~ 238 (591)
...+..+.++|+++++++++.|+.+++|+....+ ......+...|.+++|+|.+.. +++ |+.|+.|++||+.
T Consensus 230 ~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~ 309 (420)
T 4gga_A 230 SQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVC 309 (420)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETT
T ss_pred ccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCC
Confidence 7889999999999999999999999999986543 2344555779999999997764 444 3579999999999
Q ss_pred CCCcceEEeeeeccccEEEEEecCCCCEEEEEe--CCccEEEEEccCccccceeeehhhhccccccCCCCCeEEEecCCC
Q psy710 239 QKRPEIVHSLKFQRERITYIHLPLQSKWLYVGT--EKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPL 316 (591)
Q Consensus 239 ~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~ 316 (591)
++ .+...+..+ ..+.++.|+|+++.+++++ .|+.|++||+.+++. ...+.+|.+.|++++|+|
T Consensus 310 t~--~~~~~~~~~-~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~-----------v~~l~gH~~~V~~l~~sp- 374 (420)
T 4gga_A 310 SG--ACLSAVDAH-SQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAK-----------VAELKGHTSRVLSLTMSP- 374 (420)
T ss_dssp TT--EEEEEEECS-SCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCE-----------EEEECCCSSCEEEEEECT-
T ss_pred cc--ccceeeccc-cceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcE-----------EEEEcCCCCCEEEEEEcC-
Confidence 88 677777766 7789999999999888765 789999999998876 347789999999999999
Q ss_pred CCCeEEEEEcCCEEEEEecccceEEE
Q psy710 317 DPSKLLLAYETGLVVHWDLKLKRAEF 342 (591)
Q Consensus 317 ~~~~l~~~~~dg~i~iwd~~~~~~~~ 342 (591)
++++|++|+.|++|++||+.......
T Consensus 375 dg~~l~S~s~D~tvriWdv~~~~~~~ 400 (420)
T 4gga_A 375 DGATVASAAADETLRLWRCFELDPAR 400 (420)
T ss_dssp TSSCEEEEETTTEEEEECCSCSSCC-
T ss_pred CCCEEEEEecCCeEEEEECCCCCccc
Confidence 99999999999999999998754443
No 90
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=9.8e-37 Score=291.04 Aligned_cols=251 Identities=11% Similarity=0.100 Sum_probs=202.7
Q ss_pred cccCCCCCCcEEEeCCCCcEEEEEeCCCcEEEEcCCCc---eeEeeccCCcceEEEEEee--cCCEEEEecCCCeEEEEe
Q psy710 2 FRHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGV---DAHVRHETDAAVIQMQFLT--NEGALITATADDSLHLWN 76 (591)
Q Consensus 2 ~~~gh~~~v~~~~~spdg~~la~g~~dg~i~lw~~~~~---~~~~~~~h~~~v~~l~~sp--~~~~l~s~~~d~~i~vw~ 76 (591)
+..||.+.|++++|+|+|++||+|+.|++|+|||+... .+..+.+|.+.|.+++|+| ++++|++++.|++|++||
T Consensus 8 ~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd 87 (316)
T 3bg1_A 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWR 87 (316)
T ss_dssp ------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEEC
T ss_pred ecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEE
Confidence 45699999999999999999999999999999998732 3567899999999999986 489999999999999999
Q ss_pred ecccCceeeeEEEeeccceEEEEeeCC--ceEEEEEeCCCcEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCC
Q psy710 77 FRQKRPEIVHSLKFQRERITYIHLPLQ--SKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDN 154 (591)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (591)
+++++......+.+|...|.+++|+|+ +.+|++++.|+.|++||+..+......
T Consensus 88 ~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~------------------------ 143 (316)
T 3bg1_A 88 EENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVK------------------------ 143 (316)
T ss_dssp CSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEEC------------------------
T ss_pred CCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCccee------------------------
Confidence 998754466778889999999999998 789999999999999999864211000
Q ss_pred CcCcceeeeccCCCCceEEEECCC-----------------CCEEEEEeCCCcEEEeCCCCe---EE-EEeccCCCcEEE
Q psy710 155 PLDPSKTFRHGFPYQPTAIAFDPI-----------------QKLLAIGTKTGSLRLLGRPGV---DA-HVRHETDAAVIQ 213 (591)
Q Consensus 155 ~~~~~~~~~~~~~~~v~~~~~~~~-----------------~~~l~~~~~dg~i~i~d~~~~---~~-~~~~~~~~~v~~ 213 (591)
....+|...+.+++|+|+ +++|++|+.|+.|++||.... +. .....|...|.+
T Consensus 144 ------~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~ 217 (316)
T 3bg1_A 144 ------KINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRD 217 (316)
T ss_dssp ------CBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEE
T ss_pred ------eeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEE
Confidence 001256667788888886 468999999999999998643 22 234456779999
Q ss_pred EEEEcCC----ceEEEEeCCCcEEEEEccCCCc--ceEEeeeeccccEEEEEecCCCCEEEEEeCCccEEEEEcc
Q psy710 214 MQFLTNE----GALITATADDSLHLWNFRQKRP--EIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIE 282 (591)
Q Consensus 214 ~~~~~~~----~~l~~~~~d~~i~~wd~~~~~~--~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~i~d~~ 282 (591)
++|+|++ ++|++++.|++|++|+++.... .....+..|...|.+++|+|++++|++++.|+.|++|+..
T Consensus 218 v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 218 VAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKES 292 (316)
T ss_dssp EECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEEC
T ss_pred EEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEEC
Confidence 9999986 7899999999999999976310 1223455678899999999999999999999999999975
No 91
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=1.5e-35 Score=287.13 Aligned_cols=284 Identities=12% Similarity=0.173 Sum_probs=239.9
Q ss_pred EeeccCCcceEEEEEeecCCEEEEecCCCeEEEEeecccCc-eeeeEEEeeccceEEEEeeCCce-EEEEEeCCCcEEEE
Q psy710 42 HVRHETDAAVIQMQFLTNEGALITATADDSLHLWNFRQKRP-EIVHSLKFQRERITYIHLPLQSK-WLYVGTEKGNIHVV 119 (591)
Q Consensus 42 ~~~~~h~~~v~~l~~sp~~~~l~s~~~d~~i~vw~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~vw 119 (591)
....+|.+.|.+++|+|++++|++++.|+.|++|++.+++. .....+..|...|.+++|+|+++ +|++++.|+.|++|
T Consensus 5 ~~~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~w 84 (342)
T 1yfq_A 5 QIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKV 84 (342)
T ss_dssp ECSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEE
T ss_pred ecccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEE
Confidence 34568999999999999999999999999999999987751 23455668999999999999999 99999999999999
Q ss_pred Ee-eeeeeeceecccccccccCCCCCCCceeccCCCCcCcceeeecc--CCCCceEEEECCCCCEEEEEeCCCcEEEeCC
Q psy710 120 NI-ESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHG--FPYQPTAIAFDPIQKLLAIGTKTGSLRLLGR 196 (591)
Q Consensus 120 d~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~ 196 (591)
|+ .+++.. .+ .+ |...|.+++|+| ++++++++.|+.|++||+
T Consensus 85 d~~~~~~~~-~~---------------------------------~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~ 129 (342)
T 1yfq_A 85 DLIGSPSFQ-AL---------------------------------TNNEANLGICRICKYG-DDKLIAASWDGLIEVIDP 129 (342)
T ss_dssp CSSSSSSEE-EC---------------------------------BSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECH
T ss_pred EeccCCceE-ec---------------------------------cccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcc
Confidence 99 775431 11 24 778899999999 999999999999999998
Q ss_pred CC---------eEEEEeccCCCcEEEEEEEcCCceEEEEeCCCcEEEEEccC-CCcceEEeeeeccccEEEEEecC-CCC
Q psy710 197 PG---------VDAHVRHETDAAVIQMQFLTNEGALITATADDSLHLWNFRQ-KRPEIVHSLKFQRERITYIHLPL-QSK 265 (591)
Q Consensus 197 ~~---------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~-~~~~~~~~~~~~~~~v~~~~~sp-~~~ 265 (591)
.. .+......+...+.+++|+|++ +++++.|+.|++||++. ...........+...+.+++|+| +++
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~ 207 (342)
T 1yfq_A 130 RNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSR--LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQE 207 (342)
T ss_dssp HHHTTBCEEEEESCSSSSSSCCCEEEEEECSSE--EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGC
T ss_pred cccccccccccCCeeeEEeeCCceEEEEecCCc--EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCC
Confidence 76 5544444567799999999887 99999999999999998 53234445556778999999999 999
Q ss_pred EEEEEeCCccEEEEEccCc------cccceeeehhhhccccccCC---------CCCeEEEecCCCCCCeEEEEEcCCEE
Q psy710 266 WLYVGTEKGNIHVVNIESF------TLSGYIINWNKAIDVCMKTH---------PGPIIHLSDNPLDPSKLLLAYETGLV 330 (591)
Q Consensus 266 ~l~~~~~dg~i~i~d~~~~------~~~~~~~~~~~~~~~~~~~~---------~~~v~~~~~sp~~~~~l~~~~~dg~i 330 (591)
++++++.||.|++|+++.. +. ...+..| ...|.+++|+| ++++|++++.||.|
T Consensus 208 ~l~~~~~dg~i~i~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~~~~~dg~i 275 (342)
T 1yfq_A 208 GYACSSIDGRVAVEFFDDQGDDYNSSK-----------RFAFRCHRLNLKDTNLAYPVNSIEFSP-RHKFLYTAGSDGII 275 (342)
T ss_dssp EEEEEETTSEEEEEECCTTCCSTTCTT-----------CEEEECCCCCTTCCSSCCCEEEEEECT-TTCCEEEEETTSCE
T ss_pred EEEEEecCCcEEEEEEcCCCccccccc-----------ceeeecccccccccccceeEEEEEEcC-CCCEEEEecCCceE
Confidence 9999999999999999876 22 2233444 45999999999 99999999999999
Q ss_pred EEEecccceEEEEec-c-CCCeeEEEEeecCCEEEEEecCCc-EEEEec
Q psy710 331 VHWDLKLKRAEFRWQ-C-SEPIKSVCWHYEGKQFLCSHTDGT-ISTWAV 376 (591)
Q Consensus 331 ~iwd~~~~~~~~~~~-~-~~~v~~~~~sp~g~~l~s~~~dg~-i~vwd~ 376 (591)
++||+.+++.+..+. | ...|.+++ |++++|++++.||. .+.|..
T Consensus 276 ~vwd~~~~~~~~~~~~~h~~~v~~~~--~~~~~l~s~s~Dg~~~~~~~~ 322 (342)
T 1yfq_A 276 SCWNLQTRKKIKNFAKFNEDSVVKIA--CSDNILCLATSDDTFKTNAAI 322 (342)
T ss_dssp EEEETTTTEEEEECCCCSSSEEEEEE--ECSSEEEEEEECTHHHHCSSS
T ss_pred EEEcCccHhHhhhhhcccCCCceEec--CCCCeEEEEecCCcccccccc
Confidence 999999999888776 5 88999999 99999999999998 655554
No 92
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=5e-36 Score=301.90 Aligned_cols=299 Identities=12% Similarity=0.144 Sum_probs=231.3
Q ss_pred CCCCCcEEEeCCCCcEEEEEeCCCcEEEEcCCCc------------eeEeeccCC------------cceEEEEEeecC-
Q psy710 6 FPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGV------------DAHVRHETD------------AAVIQMQFLTNE- 60 (591)
Q Consensus 6 h~~~v~~~~~spdg~~la~g~~dg~i~lw~~~~~------------~~~~~~~h~------------~~v~~l~~sp~~- 60 (591)
|.+.|++++|+|+|++||+|+.||.|+||++... ....+.+|. ..|.+++|+|++
T Consensus 27 ~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~ 106 (447)
T 3dw8_B 27 EADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKN 106 (447)
T ss_dssp GGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCS
T ss_pred ccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCC
Confidence 5789999999999999999999999999998733 366788998 889999999998
Q ss_pred -CEEEEecCCCeEEEEeecccCce-------------------------------------eeeE-EEeeccceEEEEee
Q psy710 61 -GALITATADDSLHLWNFRQKRPE-------------------------------------IVHS-LKFQRERITYIHLP 101 (591)
Q Consensus 61 -~~l~s~~~d~~i~vw~~~~~~~~-------------------------------------~~~~-~~~~~~~v~~~~~~ 101 (591)
.+|++++.|++|++||+.+++.. .... ..+|...|.+++|+
T Consensus 107 ~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 186 (447)
T 3dw8_B 107 AAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISIN 186 (447)
T ss_dssp SSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEEC
T ss_pred cceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEc
Confidence 79999999999999999864310 0112 35789999999999
Q ss_pred CCceEEEEEeCCCcEEEEEeee-eeeeceecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCCC-
Q psy710 102 LQSKWLYVGTEKGNIHVVNIES-FTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQ- 179 (591)
Q Consensus 102 ~~~~~l~~~~~d~~i~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~- 179 (591)
|++++|+++ .|+.|++||+.+ ++....+..... ...+|...|.+++|+|++
T Consensus 187 ~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~--------------------------~~~~~~~~v~~~~~~p~~~ 239 (447)
T 3dw8_B 187 SDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPA--------------------------NMEELTEVITAAEFHPNSC 239 (447)
T ss_dssp TTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCS--------------------------SGGGCCCCEEEEEECSSCT
T ss_pred CCCCEEEEe-CCCeEEEEECCCCCceeeeeecccc--------------------------cccccCcceEEEEECCCCC
Confidence 999999998 799999999984 333332210000 013678889999999998
Q ss_pred CEEEEEeCCCcEEEeCCCCeEE-----EEeccCCC------------cEEEEEEEcCCceEEEEeCCCcEEEEEccC-CC
Q psy710 180 KLLAIGTKTGSLRLLGRPGVDA-----HVRHETDA------------AVIQMQFLTNEGALITATADDSLHLWNFRQ-KR 241 (591)
Q Consensus 180 ~~l~~~~~dg~i~i~d~~~~~~-----~~~~~~~~------------~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~-~~ 241 (591)
++|++|+.||.|++||+...+. .....+.. .|.+++|+|++++|++++. +.|++||++. +
T Consensus 240 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~- 317 (447)
T 3dw8_B 240 NTFVYSSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMEN- 317 (447)
T ss_dssp TEEEEEETTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCS-
T ss_pred cEEEEEeCCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCc-
Confidence 9999999999999999987664 33333333 8999999999999999999 9999999987 5
Q ss_pred cceEEeeeecccc---------------EEEEEecCCCCEEEEEeCCccEEEEEccCccccceeeehh------------
Q psy710 242 PEIVHSLKFQRER---------------ITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWN------------ 294 (591)
Q Consensus 242 ~~~~~~~~~~~~~---------------v~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~------------ 294 (591)
+.+..+..|... +..++|+|++++|++|+.||.|++||+.+++.........
T Consensus 318 -~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (447)
T 3dw8_B 318 -RPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDITLEASRENNKPRTVLKPRK 396 (447)
T ss_dssp -SCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEEEECCSTTCCTTCBCCCCC
T ss_pred -cccceeeccccccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCcceeeeecccccccccccCCcc
Confidence 566777777432 3348999999999999999999999999876531100000
Q ss_pred ---------hhccccccCCCCCeEEEecCCCCCCeEEEEEcCCEEEEEecc
Q psy710 295 ---------KAIDVCMKTHPGPIIHLSDNPLDPSKLLLAYETGLVVHWDLK 336 (591)
Q Consensus 295 ---------~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~iwd~~ 336 (591)
.........+...|..++|+| ++++||+++.++ +++|..+
T Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p-~~~~la~~~~~~-~~~~~~~ 445 (447)
T 3dw8_B 397 VCASGKRKKDEISVDSLDFNKKILHTAWHP-KENIIAVATTNN-LYIFQDK 445 (447)
T ss_dssp EECSSCCCTTCEEGGGCCTTSCCCEEEECS-SSSEEEEECSSC-EEEEECC
T ss_pred ccccCCcccccccccccccCCceeEEEECC-CCCEEEEEecce-eeeeccc
Confidence 000001123456789999999 999999998876 6677643
No 93
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=1.1e-35 Score=288.92 Aligned_cols=308 Identities=9% Similarity=0.061 Sum_probs=223.8
Q ss_pred cccCCCCCCcEEEeCCCCcEEEEEeCCCcEEEEcCCC-----ceeEeeccCCcceEEEEEee--cCCEEEEecCCCeEEE
Q psy710 2 FRHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPG-----VDAHVRHETDAAVIQMQFLT--NEGALITATADDSLHL 74 (591)
Q Consensus 2 ~~~gh~~~v~~~~~spdg~~la~g~~dg~i~lw~~~~-----~~~~~~~~h~~~v~~l~~sp--~~~~l~s~~~d~~i~v 74 (591)
+..||.+.|++++|+|++++||+|+.||.|++||+.. .....+.+|...|.+++|+| ++++|++++.|+.|++
T Consensus 6 ~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~v 85 (351)
T 3f3f_A 6 FDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKL 85 (351)
T ss_dssp EECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEE
T ss_pred cCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEE
Confidence 5679999999999999999999999999999999873 24567789999999999999 6899999999999999
Q ss_pred EeecccCc-------eeeeEEEeeccceEEEEeeCC--ceEEEEEeCCCcEEEEEeeeeeeeceecccccccccCCCCCC
Q psy710 75 WNFRQKRP-------EIVHSLKFQRERITYIHLPLQ--SKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHP 145 (591)
Q Consensus 75 w~~~~~~~-------~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (591)
||+.+++. ..+..+..|...|.+++|+|+ +++|++++.|+.|++||+.+++....+......
T Consensus 86 wd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~--------- 156 (351)
T 3f3f_A 86 WEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEM--------- 156 (351)
T ss_dssp EEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEE---------
T ss_pred EecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccc---------
Confidence 99987642 357778889999999999999 999999999999999999886654433211100
Q ss_pred CceeccCCCCcCcceeeeccCCCCceEEEECCC---CCEEEEEeCCCcEEEeCCCCeEE---EEeccCCCcEEEEEEEcC
Q psy710 146 GPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPI---QKLLAIGTKTGSLRLLGRPGVDA---HVRHETDAAVIQMQFLTN 219 (591)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~dg~i~i~d~~~~~~---~~~~~~~~~v~~~~~~~~ 219 (591)
........++...+.+++|+|+ +.++++++.++.+.+|+....+. .....+...|.+++|+|+
T Consensus 157 -----------~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~ 225 (351)
T 3f3f_A 157 -----------KVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPS 225 (351)
T ss_dssp -----------ESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCC
T ss_pred -----------cccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCC
Confidence 0001111356778999999997 89999999999998887766553 233446779999999999
Q ss_pred C----ceEEEEeCCCcEEEEEccCCCcceEEeeeeccccEEEEEecCCCCEEEEEeC----CccEEEEEccCccccceee
Q psy710 220 E----GALITATADDSLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGTE----KGNIHVVNIESFTLSGYII 291 (591)
Q Consensus 220 ~----~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~----dg~i~i~d~~~~~~~~~~~ 291 (591)
+ ++|++++.||.|++||++... .......+.........++....+..+.. ...+.+|+....+.
T Consensus 226 ~~~~~~~l~s~~~dg~i~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 298 (351)
T 3f3f_A 226 IGRWYQLIATGCKDGRIRIFKITEKL--SPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVEL----- 298 (351)
T ss_dssp SSCSSEEEEEEETTSCEEEEEEEECC-----------------------------------------CCSEEEEE-----
T ss_pred CCCcceEEEEEcCCCeEEEEeCCCCc--CccccCCcccceeccCCCcccccccccccccccceeeeecccccccE-----
Confidence 8 899999999999999998762 32223323233444444444444443332 23444444444333
Q ss_pred ehhhhccccccCCCCCeEEEecCCCCCCeEEEEEcCCEEEEEecccceEEEE
Q psy710 292 NWNKAIDVCMKTHPGPIIHLSDNPLDPSKLLLAYETGLVVHWDLKLKRAEFR 343 (591)
Q Consensus 292 ~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~iwd~~~~~~~~~ 343 (591)
...+.+|...|++++|+| ++++|++++.||.|++||+.+++....
T Consensus 299 ------~~~~~~h~~~v~~~~~s~-~~~~l~s~~~dg~v~iw~~~~~~~~~~ 343 (351)
T 3f3f_A 299 ------LSEHDDHNGEVWSVSWNL-TGTILSSAGDDGKVRLWKATYSNEFKC 343 (351)
T ss_dssp ------EEEECTTSSCEEEEEECS-SSCCEEEEETTSCEEEEEECTTSCEEE
T ss_pred ------EEEEecccccEEEEEEcC-CCCEEEEecCCCcEEEEecCcCcchhh
Confidence 336778999999999999 999999999999999999998765443
No 94
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=2.3e-35 Score=293.82 Aligned_cols=289 Identities=12% Similarity=0.179 Sum_probs=232.7
Q ss_pred ceEEEEEeecCCEEEEecCCCeEEEEeecccCceeeeEEEeeccceEEEEeeCCceEEEEEeCCCcEEEEEeeeeeeece
Q psy710 50 AVIQMQFLTNEGALITATADDSLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGY 129 (591)
Q Consensus 50 ~v~~l~~sp~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~ 129 (591)
.++.|+||++ +.|++| .|++|+|||..+++......+..|...|++++|+|++++|++|+.|+.|++||+.+++.+..
T Consensus 107 y~~~l~wS~~-n~lAvg-ld~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~ 184 (420)
T 4gga_A 107 YLNLVDWSSG-NVLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRN 184 (420)
T ss_dssp TCBCEEECTT-SEEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEE
T ss_pred cceeEEECCC-CEEEEE-eCCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEE
Confidence 4667999976 577766 58999999999986433344556778899999999999999999999999999999887666
Q ss_pred ecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCCCCEEEEEeCCCcEEEeCCCCeE--EEEeccC
Q psy710 130 IINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGVD--AHVRHET 207 (591)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~--~~~~~~~ 207 (591)
+. +|...+.++++ ++.++++|+.|+.+++||..... ......+
T Consensus 185 ~~---------------------------------~h~~~v~~~s~--~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h 229 (420)
T 4gga_A 185 MT---------------------------------SHSARVGSLSW--NSYILSSGSRSGHIHHHDVRVAEHHVATLSGH 229 (420)
T ss_dssp EC---------------------------------CCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECC
T ss_pred Ee---------------------------------CCCCceEEEee--CCCEEEEEeCCCceeEeeecccceeeEEeccc
Confidence 54 46666777766 56789999999999999976532 3344556
Q ss_pred CCcEEEEEEEcCCceEEEEeCCCcEEEEEccCCCc--ceEEeeeeccccEEEEEecCCCC-EEEE--EeCCccEEEEEcc
Q psy710 208 DAAVIQMQFLTNEGALITATADDSLHLWNFRQKRP--EIVHSLKFQRERITYIHLPLQSK-WLYV--GTEKGNIHVVNIE 282 (591)
Q Consensus 208 ~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~--~~~~~~~~~~~~v~~~~~sp~~~-~l~~--~~~dg~i~i~d~~ 282 (591)
...+..+.|+|+++++++++.|+.+++|+...++. ..+.....|...|.+++|+|++. ++++ |+.|+.|++||+.
T Consensus 230 ~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~ 309 (420)
T 4gga_A 230 SQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVC 309 (420)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETT
T ss_pred ccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCC
Confidence 77999999999999999999999999999987632 24556677889999999999765 4444 4579999999999
Q ss_pred CccccceeeehhhhccccccCCCCCeEEEecCCCCCCeEEEEE--cCCEEEEEecccceEEEEec-cCCCeeEEEEeecC
Q psy710 283 SFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKLLLAY--ETGLVVHWDLKLKRAEFRWQ-CSEPIKSVCWHYEG 359 (591)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~--~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp~g 359 (591)
+++... .+ .+...+.++.|+| +++.+++++ .|+.|+|||+.+++.+..+. |...|++++|+|||
T Consensus 310 t~~~~~-----------~~-~~~~~v~~~~~~~-~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg 376 (420)
T 4gga_A 310 SGACLS-----------AV-DAHSQVCSILWSP-HYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDG 376 (420)
T ss_dssp TTEEEE-----------EE-ECSSCEEEEEEET-TTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTS
T ss_pred ccccce-----------ee-ccccceeeeeecC-CCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCC
Confidence 987632 22 3446789999999 889888865 68999999999999888876 99999999999999
Q ss_pred CEEEEEecCCcEEEEecCCCCCceeeeccc
Q psy710 360 KQFLCSHTDGTISTWAVRPLAKPVSVNQPH 389 (591)
Q Consensus 360 ~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~ 389 (591)
++|++|+.|++|+|||+. ...+.+....+
T Consensus 377 ~~l~S~s~D~tvriWdv~-~~~~~~~~~~~ 405 (420)
T 4gga_A 377 ATVASAAADETLRLWRCF-ELDPARRRERE 405 (420)
T ss_dssp SCEEEEETTTEEEEECCS-CSSCC------
T ss_pred CEEEEEecCCeEEEEECC-CCCccchhhhc
Confidence 999999999999999998 44555444444
No 95
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=2.4e-35 Score=288.76 Aligned_cols=295 Identities=11% Similarity=0.154 Sum_probs=239.4
Q ss_pred CceeEeeccCCcceEEEEEeec---CCEEEEecCCCeEEEEeecccCceeeeEEEeeccceEEEEeeCCceEEEEEeCCC
Q psy710 38 GVDAHVRHETDAAVIQMQFLTN---EGALITATADDSLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEKG 114 (591)
Q Consensus 38 ~~~~~~~~~h~~~v~~l~~sp~---~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~ 114 (591)
...+..+.+|.+.|.+++|+|+ |++|++++.|+.|++||+.+........+.+|...|.+++|+|++++|++++.|+
T Consensus 29 ~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg 108 (368)
T 3mmy_A 29 MKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDK 108 (368)
T ss_dssp TCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTS
T ss_pred cceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCC
Confidence 5567788999999999999999 5999999999999999999843345578899999999999999999999999999
Q ss_pred cEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEE--CCCCCEEEEEeCCCcEE
Q psy710 115 NIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAF--DPIQKLLAIGTKTGSLR 192 (591)
Q Consensus 115 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~l~~~~~dg~i~ 192 (591)
.|++||+.+++.... .+|...|.+++| +|++++|++++.||.|+
T Consensus 109 ~v~iwd~~~~~~~~~----------------------------------~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~ 154 (368)
T 3mmy_A 109 TAKMWDLSSNQAIQI----------------------------------AQHDAPVKTIHWIKAPNYSCVMTGSWDKTLK 154 (368)
T ss_dssp EEEEEETTTTEEEEE----------------------------------EECSSCEEEEEEEECSSCEEEEEEETTSEEE
T ss_pred cEEEEEcCCCCceee----------------------------------ccccCceEEEEEEeCCCCCEEEEccCCCcEE
Confidence 999999998765442 246788999999 99999999999999999
Q ss_pred EeCCCCeEEEEeccCCCcEEEEEEEcCCceEEEEeCCCcEEEEEccCCCcceEEeeeeccccEEEEEecCCCCE----EE
Q psy710 193 LLGRPGVDAHVRHETDAAVIQMQFLTNEGALITATADDSLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQSKW----LY 268 (591)
Q Consensus 193 i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~----l~ 268 (591)
+||+...+..........+.++.+.+ ..+++++.++.+.+|+++............+...+.++.+.++... ++
T Consensus 155 vwd~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (368)
T 3mmy_A 155 FWDTRSSNPMMVLQLPERCYCADVIY--PMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFA 232 (368)
T ss_dssp EECSSCSSCSEEEECSSCEEEEEEET--TEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEE
T ss_pred EEECCCCcEEEEEecCCCceEEEecC--CeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEE
Confidence 99998776655555545677776664 4788889999999999987642222222233345566666555444 99
Q ss_pred EEeCCccEEEEEccCccccceeeehhhhccccccCCCC------------CeEEEecCCCCCCeEEEEEcCCEEEEEecc
Q psy710 269 VGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPG------------PIIHLSDNPLDPSKLLLAYETGLVVHWDLK 336 (591)
Q Consensus 269 ~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~------------~v~~~~~sp~~~~~l~~~~~dg~i~iwd~~ 336 (591)
+++.||.|++|++....... ....+..|.. .|.+++|+| ++++|++++.||.|++||+.
T Consensus 233 ~~~~dg~i~i~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp-~~~~l~s~~~dg~i~iwd~~ 303 (368)
T 3mmy_A 233 LGSIEGRVAIHYINPPNPAK--------DNFTFKCHRSNGTNTSAPQDIYAVNGIAFHP-VHGTLATVGSDGRFSFWDKD 303 (368)
T ss_dssp EEETTSEEEEEESSCSCHHH--------HSEEEECSEEC----CCCEEECCEEEEEECT-TTCCEEEEETTSCEEEEETT
T ss_pred EecCCCcEEEEecCCCCccc--------cceeeeeeecccccccccccccceEEEEEec-CCCEEEEEccCCeEEEEECC
Confidence 99999999999998864310 0223344443 799999999 99999999999999999999
Q ss_pred cceEEEEec-cCCCeeEEEEeecCCEEEEEecCCcEEEEecC
Q psy710 337 LKRAEFRWQ-CSEPIKSVCWHYEGKQFLCSHTDGTISTWAVR 377 (591)
Q Consensus 337 ~~~~~~~~~-~~~~v~~~~~sp~g~~l~s~~~dg~i~vwd~~ 377 (591)
+++.+..+. |...|.+++|+|+|++|++++.|+..+.|++-
T Consensus 304 ~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~s~d~~~~~~~~~ 345 (368)
T 3mmy_A 304 ARTKLKTSEQLDQPISACCFNHNGNIFAYASSYDWSKGHEFY 345 (368)
T ss_dssp TTEEEEECCCCSSCEEEEEECTTSSCEEEEECCCSTTCGGGC
T ss_pred CCcEEEEecCCCCCceEEEECCCCCeEEEEeccccccccccc
Confidence 999888776 78999999999999999999999876666655
No 96
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=2.4e-36 Score=288.30 Aligned_cols=255 Identities=12% Similarity=0.147 Sum_probs=205.7
Q ss_pred eeccCCcceEEEEEeecCCEEEEecCCCeEEEEeecccCceeeeEEEeeccceEEEEeeC--CceEEEEEeCCCcEEEEE
Q psy710 43 VRHETDAAVIQMQFLTNEGALITATADDSLHLWNFRQKRPEIVHSLKFQRERITYIHLPL--QSKWLYVGTEKGNIHVVN 120 (591)
Q Consensus 43 ~~~~h~~~v~~l~~sp~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~vwd 120 (591)
.+.+|.+.|++++|+|+|++|++++.|++|++||+.+++...+..+.+|...|.+++|++ ++++|++++.|++|++||
T Consensus 8 ~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd 87 (316)
T 3bg1_A 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWR 87 (316)
T ss_dssp ------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEEC
T ss_pred ecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEE
Confidence 457899999999999999999999999999999998775346778999999999999986 489999999999999999
Q ss_pred eeeeeeeceecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCC--CCEEEEEeCCCcEEEeCCCC
Q psy710 121 IESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPI--QKLLAIGTKTGSLRLLGRPG 198 (591)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~i~d~~~ 198 (591)
+++++.... ..+ .+|...|.+++|+|+ +.+|++|+.|+.|++|+...
T Consensus 88 ~~~~~~~~~------------------------------~~~-~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~ 136 (316)
T 3bg1_A 88 EENGTWEKS------------------------------HEH-AGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTG 136 (316)
T ss_dssp CSSSCCCEE------------------------------EEE-CCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECS
T ss_pred CCCCcceEE------------------------------EEc-cCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCC
Confidence 987532111 011 367788999999997 78999999999999999876
Q ss_pred eE-E---EEeccCCCcEEEEEEEcC-----------------CceEEEEeCCCcEEEEEccCCC-cceEEeeeeccccEE
Q psy710 199 VD-A---HVRHETDAAVIQMQFLTN-----------------EGALITATADDSLHLWNFRQKR-PEIVHSLKFQRERIT 256 (591)
Q Consensus 199 ~~-~---~~~~~~~~~v~~~~~~~~-----------------~~~l~~~~~d~~i~~wd~~~~~-~~~~~~~~~~~~~v~ 256 (591)
.. . .....+...+.+++|+|+ +++|++++.|+.|++||++... ...+..+.+|...|.
T Consensus 137 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~ 216 (316)
T 3bg1_A 137 EGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVR 216 (316)
T ss_dssp SSCEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEE
T ss_pred CCCcceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceE
Confidence 42 1 122345668999999997 4689999999999999997542 246778889999999
Q ss_pred EEEecCCC----CEEEEEeCCccEEEEEccCccccceeeehhhhccccccCCCCCeEEEecCCCCCCeEEEEEcCCEEEE
Q psy710 257 YIHLPLQS----KWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKLLLAYETGLVVH 332 (591)
Q Consensus 257 ~~~~sp~~----~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~i 332 (591)
+++|+|++ ++|++++.|++|++|++.+..... .....+..|...|.+++|+| ++++|++++.|+.|++
T Consensus 217 ~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~-------~~~~~~~~~~~~v~~v~~sp-~g~~las~~~D~~v~l 288 (316)
T 3bg1_A 217 DVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNT-------WSPKLLHKFNDVVWHVSWSI-TANILAVSGGDNKVTL 288 (316)
T ss_dssp EEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCC-------CBCCEEEECSSCEEEEEECT-TTCCEEEEESSSCEEE
T ss_pred EEEecCCCCCCCceEEEEcCCCeEEEEEccCccccc-------hhhhhhhcCCCcEEEEEEcC-CCCEEEEEcCCCeEEE
Confidence 99999987 889999999999999998632100 00113456889999999999 9999999999999999
Q ss_pred Eecc
Q psy710 333 WDLK 336 (591)
Q Consensus 333 wd~~ 336 (591)
|+..
T Consensus 289 w~~~ 292 (316)
T 3bg1_A 289 WKES 292 (316)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 9976
No 97
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-34 Score=284.55 Aligned_cols=260 Identities=10% Similarity=0.112 Sum_probs=219.0
Q ss_pred ceeEeeccCCcceEEEEEeecCCEEEEecCCCeEEEEeecccCceeeeEEEeeccceEEEEeeCC--ceEEEEEeCCCcE
Q psy710 39 VDAHVRHETDAAVIQMQFLTNEGALITATADDSLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQ--SKWLYVGTEKGNI 116 (591)
Q Consensus 39 ~~~~~~~~h~~~v~~l~~sp~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i 116 (591)
.....+.+|...|.+++|+|++++|++++.|+.|++|++.......+..+.+|...|.+++|+++ +++|++++.|+.|
T Consensus 2 ~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v 81 (379)
T 3jrp_A 2 SMVVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKV 81 (379)
T ss_dssp ---CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCE
T ss_pred CccEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEE
Confidence 34567889999999999999999999999999999999985544677889999999999999977 8999999999999
Q ss_pred EEEEeeeee--eeceecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCC--CCEEEEEeCCCcEE
Q psy710 117 HVVNIESFT--LSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPI--QKLLAIGTKTGSLR 192 (591)
Q Consensus 117 ~vwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~ 192 (591)
++||+.+++ ....+ .+|...|.+++|+|+ ++++++++.||.|+
T Consensus 82 ~iwd~~~~~~~~~~~~---------------------------------~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~ 128 (379)
T 3jrp_A 82 LIWKEENGRWSQIAVH---------------------------------AVHSASVNSVQWAPHEYGPLLLVASSDGKVS 128 (379)
T ss_dssp EEEEEETTEEEEEEEE---------------------------------CCCSSCEEEEEECCGGGCSEEEEEETTSEEE
T ss_pred EEEEcCCCceeEeeee---------------------------------cCCCcceEEEEeCCCCCCCEEEEecCCCcEE
Confidence 999999865 22222 246778999999999 99999999999999
Q ss_pred EeCCCCe---EEEEeccCCCcEEEEEEEc-------------CCceEEEEeCCCcEEEEEccCCCc--ceEEeeeecccc
Q psy710 193 LLGRPGV---DAHVRHETDAAVIQMQFLT-------------NEGALITATADDSLHLWNFRQKRP--EIVHSLKFQRER 254 (591)
Q Consensus 193 i~d~~~~---~~~~~~~~~~~v~~~~~~~-------------~~~~l~~~~~d~~i~~wd~~~~~~--~~~~~~~~~~~~ 254 (591)
+||+... .......+...|.+++|+| ++++|++++.|+.|++||++.... .....+.+|...
T Consensus 129 v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~ 208 (379)
T 3jrp_A 129 VVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDW 208 (379)
T ss_dssp EEECCTTSCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSC
T ss_pred EEecCCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCc
Confidence 9998765 3334455677999999999 699999999999999999987642 255677889999
Q ss_pred EEEEEecCC---CCEEEEEeCCccEEEEEccCccccceeeehhhhccccccCCCCCeEEEecCCCCCCeEEEEEcCCEEE
Q psy710 255 ITYIHLPLQ---SKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKLLLAYETGLVV 331 (591)
Q Consensus 255 v~~~~~sp~---~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~ 331 (591)
|.+++|+|+ +++|++++.||.|++||+.+....... .......|...|.+++|+| ++++|++++.||.|+
T Consensus 209 v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~------~~~~~~~~~~~v~~~~~s~-~g~~l~~~~~dg~i~ 281 (379)
T 3jrp_A 209 VRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKK------TLLKEEKFPDVLWRASWSL-SGNVLALSGGDNKVT 281 (379)
T ss_dssp EEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEE------EESSSSCCSSCEEEEEECS-SSCCEEEEESSSSEE
T ss_pred EeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCcccee------eeeccccCCCcEEEEEEcC-CCCEEEEecCCCcEE
Confidence 999999999 899999999999999999986421100 0223455889999999999 999999999999999
Q ss_pred EEecccc
Q psy710 332 HWDLKLK 338 (591)
Q Consensus 332 iwd~~~~ 338 (591)
+|++..+
T Consensus 282 iw~~~~~ 288 (379)
T 3jrp_A 282 LWKENLE 288 (379)
T ss_dssp EEEEEET
T ss_pred EEeCCCC
Confidence 9999853
No 98
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=3.2e-35 Score=294.26 Aligned_cols=303 Identities=12% Similarity=0.215 Sum_probs=234.3
Q ss_pred cCCCCCCcEEEeCCCCcEEEEEeCCCcEEEEcCC-CceeEeeccCCcceEEEEEeecCCEEEEecCCCeEEEEeecccCc
Q psy710 4 HGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRP-GVDAHVRHETDAAVIQMQFLTNEGALITATADDSLHLWNFRQKRP 82 (591)
Q Consensus 4 ~gh~~~v~~~~~spdg~~la~g~~dg~i~lw~~~-~~~~~~~~~h~~~v~~l~~sp~~~~l~s~~~d~~i~vw~~~~~~~ 82 (591)
.+|...|++++| ++++|++|+.||.|++||+. +.....+.+|...|.+++| ++++|++|+.||+|++||+.+++
T Consensus 130 ~~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~- 204 (435)
T 1p22_A 130 SETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGE- 204 (435)
T ss_dssp CSSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCC-
T ss_pred cCCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCc-
Confidence 357778888887 78999999999999999987 6677888999999999999 78899999999999999999884
Q ss_pred eeeeEEEeeccceEEEEeeCCceEEEEEeCCCcEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCcceee
Q psy710 83 EIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTF 162 (591)
Q Consensus 83 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (591)
.+..+.+|...|.+++|++ +.+++++.|+.|++||+.+++..... ..
T Consensus 205 -~~~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~------------------------------~~ 251 (435)
T 1p22_A 205 -MLNTLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLR------------------------------RV 251 (435)
T ss_dssp -EEEEECCCCSCEEEEECCT--TEEEEEETTSCEEEEECSSSSCCEEE------------------------------EE
T ss_pred -EEEEEcCCCCcEEEEEEcC--CEEEEeeCCCcEEEEeCCCCCCceee------------------------------eE
Confidence 6888899999999999974 58999999999999999875432110 11
Q ss_pred eccCCCCceEEEECCCCCEEEEEeCCCcEEEeCCCCeEEEEe-ccCCCcEEEEEEEcCCceEEEEeCCCcEEEEEccCCC
Q psy710 163 RHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGVDAHVR-HETDAAVIQMQFLTNEGALITATADDSLHLWNFRQKR 241 (591)
Q Consensus 163 ~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~ 241 (591)
..+|...|.+++| +++++++|+.||.|++||+.+.+.... ..+...+.++.|+ ++++++++.||.|++||++++
T Consensus 252 ~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~g~~dg~i~iwd~~~~- 326 (435)
T 1p22_A 252 LVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECG- 326 (435)
T ss_dssp ECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTC-
T ss_pred ecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEeC--CCEEEEEeCCCeEEEEECCCC-
Confidence 1367788899999 788999999999999999988766543 3456789999984 679999999999999999988
Q ss_pred cceEEeeeeccccEEEEEecCCCCEEEEEeCCccEEEEEccCccccceeeehhhhccccccCCCCCeEEEecCCCCCCeE
Q psy710 242 PEIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKL 321 (591)
Q Consensus 242 ~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l 321 (591)
+.+..+.+|...|.+++| +++++++|+.||.|++||+.+....... ........+.+|.+.|.+++| ++++|
T Consensus 327 -~~~~~~~~h~~~v~~~~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~--~~~~~~~~~~~h~~~v~~l~~---~~~~l 398 (435)
T 1p22_A 327 -ACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLVAALDPRAP--AGTLCLRTLVEHSGRVFRLQF---DEFQI 398 (435)
T ss_dssp -CEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEEHHHHTSTTSC--TTTTEEEEECCCSSCCCCEEE---CSSCE
T ss_pred -CEEEEEeCCcCcEEEEEe--cCCEEEEEeCCCcEEEEECCCCCCcccc--ccchheeeccCCCCCeEEEEe---CCCEE
Confidence 788999999999999999 7899999999999999999876521000 000013356789999999999 45889
Q ss_pred EEEEcCCEEEEEecccceEEEEeccCCCeeEEEEee
Q psy710 322 LLAYETGLVVHWDLKLKRAEFRWQCSEPIKSVCWHY 357 (591)
Q Consensus 322 ~~~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp 357 (591)
++++.||.|++||+.+...........+..++.|.+
T Consensus 399 ~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 434 (435)
T 1p22_A 399 VSSSHDDTILIWDFLNDPAAQAEPPRSPSRTYTYIS 434 (435)
T ss_dssp EECCSSSEEEEEC-----------------------
T ss_pred EEEeCCCEEEEEECCCCCCcccCCCCCCccceeeec
Confidence 999999999999999877665555555666666543
No 99
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=3.7e-35 Score=285.11 Aligned_cols=307 Identities=11% Similarity=0.083 Sum_probs=224.9
Q ss_pred EeeccCCcceEEEEEeecCCEEEEecCCCeEEEEeecccCc--eeeeEEEeeccceEEEEeeC--CceEEEEEeCCCcEE
Q psy710 42 HVRHETDAAVIQMQFLTNEGALITATADDSLHLWNFRQKRP--EIVHSLKFQRERITYIHLPL--QSKWLYVGTEKGNIH 117 (591)
Q Consensus 42 ~~~~~h~~~v~~l~~sp~~~~l~s~~~d~~i~vw~~~~~~~--~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~ 117 (591)
..+.+|.+.|++++|+|++++|++++.|+.|++||+.++.. .....+.+|...|.+++|+| ++++|++++.|+.|+
T Consensus 5 ~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~ 84 (351)
T 3f3f_A 5 PFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVK 84 (351)
T ss_dssp CEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEE
T ss_pred ccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEE
Confidence 45689999999999999999999999999999999986532 35677889999999999999 699999999999999
Q ss_pred EEEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCC--CCEEEEEeCCCcEEEeC
Q psy710 118 VVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPI--QKLLAIGTKTGSLRLLG 195 (591)
Q Consensus 118 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~i~d 195 (591)
+||+.+++..... ...+....+ .+|...|.+++|+|+ ++++++++.||.|++||
T Consensus 85 vwd~~~~~~~~~~-----------------------~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd 140 (351)
T 3f3f_A 85 LWEEDPDQEECSG-----------------------RRWNKLCTL-NDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYD 140 (351)
T ss_dssp EEEECTTSCTTSS-----------------------CSEEEEEEE-CCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEE
T ss_pred EEecCCCcccccc-----------------------cCcceeeee-cccCCceeEEEEcCCCCCcEEEEecCCCcEEEec
Confidence 9999875321100 000111111 367788999999999 99999999999999999
Q ss_pred CCCeEEEE--------------eccCCCcEEEEEEEcC---CceEEEEeCCCcEEEEEccCCCcceEEeeeeccccEEEE
Q psy710 196 RPGVDAHV--------------RHETDAAVIQMQFLTN---EGALITATADDSLHLWNFRQKRPEIVHSLKFQRERITYI 258 (591)
Q Consensus 196 ~~~~~~~~--------------~~~~~~~v~~~~~~~~---~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~ 258 (591)
+...+... ...+...+.+++|+|+ +..+++++.++.+.+|+...+....+..+.+|...|.++
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~ 220 (351)
T 3f3f_A 141 ALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSI 220 (351)
T ss_dssp CSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEE
T ss_pred CCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEE
Confidence 86543211 1134568999999997 899999999999988888877555688888999999999
Q ss_pred EecCCC----CEEEEEeCCccEEEEEccCccccceeeehhhhccccccCCCCCeEEEecCCCCCCeEEEE----EcCCEE
Q psy710 259 HLPLQS----KWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKLLLA----YETGLV 330 (591)
Q Consensus 259 ~~sp~~----~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~----~~dg~i 330 (591)
+|+|++ ++|++++.||.|++||+....... ....+.........++ ....+..+ .....+
T Consensus 221 ~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~-----------~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 288 (351)
T 3f3f_A 221 SWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPL-----------ASEESLTNSNMFDNSA-DVDMDAQGRSDSNTEEKA 288 (351)
T ss_dssp EECCCSSCSSEEEEEEETTSCEEEEEEEECC-------------------------------------------------
T ss_pred EECCCCCCcceEEEEEcCCCeEEEEeCCCCcCcc-----------ccCCcccceeccCCCc-ccccccccccccccceee
Confidence 999998 899999999999999998764421 1222222333333333 33333333 334566
Q ss_pred EEEecccceEEEEec-cCCCeeEEEEeecCCEEEEEecCCcEEEEecCCCCCceee
Q psy710 331 VHWDLKLKRAEFRWQ-CSEPIKSVCWHYEGKQFLCSHTDGTISTWAVRPLAKPVSV 385 (591)
Q Consensus 331 ~iwd~~~~~~~~~~~-~~~~v~~~~~sp~g~~l~s~~~dg~i~vwd~~~~~~~~~~ 385 (591)
.+|+....+.+..+. |...|++++|+|++++|++++.||.|++||+. .++.++.
T Consensus 289 ~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~-~~~~~~~ 343 (351)
T 3f3f_A 289 ELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSSAGDDGKVRLWKAT-YSNEFKC 343 (351)
T ss_dssp --CCSEEEEEEEEECTTSSCEEEEEECSSSCCEEEEETTSCEEEEEEC-TTSCEEE
T ss_pred eecccccccEEEEEecccccEEEEEEcCCCCEEEEecCCCcEEEEecC-cCcchhh
Confidence 677777777776665 88999999999999999999999999999999 5554443
No 100
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=2.7e-34 Score=275.24 Aligned_cols=276 Identities=14% Similarity=0.210 Sum_probs=227.0
Q ss_pred CcEEEeCCCCcEEEEEeCCCcEEEEcCC-CceeEee--ccCCcceEEEEEeecCCEEEEecCCCeEEEEeecccCceeee
Q psy710 10 PTAIAFDPIQKLLAIGTKTGSLRLLGRP-GVDAHVR--HETDAAVIQMQFLTNEGALITATADDSLHLWNFRQKRPEIVH 86 (591)
Q Consensus 10 v~~~~~spdg~~la~g~~dg~i~lw~~~-~~~~~~~--~~h~~~v~~l~~sp~~~~l~s~~~d~~i~vw~~~~~~~~~~~ 86 (591)
.++|+||+++ +||+|. |++|+|||++ ++.+..+ .+|...|.+++|+|++++|++|+.|++|++|+++++ +.+.
T Consensus 28 ~~~l~WS~~~-~lAvg~-D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~--~~~~ 103 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQ--KRLR 103 (318)
T ss_dssp CBCEEECTTS-EEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTT--EEEE
T ss_pred ceEEEECCCC-EEEEEe-CCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCc--eeEE
Confidence 4689999986 788775 8999999987 5555544 577889999999999999999999999999999988 4788
Q ss_pred EEEeeccceEEEEeeCCceEEEEEeCCCcEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCcceeeeccC
Q psy710 87 SLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGF 166 (591)
Q Consensus 87 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (591)
.+.+|...+.++.+ ++..+++++.++.+++|+......... ...+|
T Consensus 104 ~~~~h~~~~~~~~~--~~~~l~s~~~~~~~~~~~~~~~~~~~~--------------------------------~~~~~ 149 (318)
T 4ggc_A 104 NMTSHSARVGSLSW--NSYILSSGSRSGHIHHHDVRVAEHHVA--------------------------------TLSGH 149 (318)
T ss_dssp EEECCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEE--------------------------------EEECC
T ss_pred EecCccceEEEeec--CCCEEEEEecCCceEeeecCCCceeEE--------------------------------EEcCc
Confidence 89999888876654 567899999999999998876332111 11367
Q ss_pred CCCceEEEECCCCCEEEEEeCCCcEEEeCCCCeEE-----EEeccCCCcEEEEEEEcCCceE---EEEeCCCcEEEEEcc
Q psy710 167 PYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGVDA-----HVRHETDAAVIQMQFLTNEGAL---ITATADDSLHLWNFR 238 (591)
Q Consensus 167 ~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~-----~~~~~~~~~v~~~~~~~~~~~l---~~~~~d~~i~~wd~~ 238 (591)
...+..++++++++++++++.||.|++||+.+.+. .....+...|..+.++|++..+ ++++.++.|++||.+
T Consensus 150 ~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~ 229 (318)
T 4ggc_A 150 SQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVC 229 (318)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETT
T ss_pred cCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecc
Confidence 78889999999999999999999999999876432 2334446689999999987644 356778999999998
Q ss_pred CCCcceEEeeeeccccEEEEEecCCCCEEEEEe--CCccEEEEEccCccccceeeehhhhccccccCCCCCeEEEecCCC
Q psy710 239 QKRPEIVHSLKFQRERITYIHLPLQSKWLYVGT--EKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPL 316 (591)
Q Consensus 239 ~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~ 316 (591)
.. ..... ..+...+..+.|+|+++.+++++ .|+.|++||+++++. ...+.+|.+.|++++|+|
T Consensus 230 ~~--~~~~~-~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~-----------~~~l~gH~~~V~~l~~sp- 294 (318)
T 4ggc_A 230 SG--ACLSA-VDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAK-----------VAELKGHTSRVLSLTMSP- 294 (318)
T ss_dssp TC--CEEEE-EECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCE-----------EEEECCCSSCEEEEEECT-
T ss_pred cc--ccccc-ccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcE-----------EEEEcCCCCCEEEEEEcC-
Confidence 87 44443 34558899999999999887655 799999999998876 347789999999999999
Q ss_pred CCCeEEEEEcCCEEEEEecccc
Q psy710 317 DPSKLLLAYETGLVVHWDLKLK 338 (591)
Q Consensus 317 ~~~~l~~~~~dg~i~iwd~~~~ 338 (591)
++++|++++.|++|+|||+.+.
T Consensus 295 dg~~l~S~s~D~~v~iWd~~~~ 316 (318)
T 4ggc_A 295 DGATVASAAADETLRLWRCFEL 316 (318)
T ss_dssp TSSCEEEEETTTEEEEECCSCC
T ss_pred CCCEEEEEecCCeEEEEECCCC
Confidence 9999999999999999998754
No 101
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=7.7e-35 Score=291.54 Aligned_cols=270 Identities=16% Similarity=0.278 Sum_probs=233.1
Q ss_pred ccCCcceEEEEEeecCCEEEEecCCCeEEEEeecccCceeeeEEEeeccceEEEEeeCCceEEEEEeCCCcEEEEEeeee
Q psy710 45 HETDAAVIQMQFLTNEGALITATADDSLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESF 124 (591)
Q Consensus 45 ~~h~~~v~~l~~sp~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~ 124 (591)
.+|...|.+++| ++++|++|+.|+.|++||+.+++ ....+.+|...|.+++| +++.|++|+.||.|++||+.++
T Consensus 130 ~~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~--~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~ 203 (435)
T 1p22_A 130 SETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLE--CKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTG 203 (435)
T ss_dssp CSSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCC--EEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSC
T ss_pred cCCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCe--EEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCC
Confidence 456678998877 78999999999999999999874 67889999999999999 7889999999999999999988
Q ss_pred eeeceecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCCCCEEEEEeCCCcEEEeCCCCeEE---
Q psy710 125 TLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGVDA--- 201 (591)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~--- 201 (591)
+....+. +|...|.+++|++ +.+++|+.||.|++||+.....
T Consensus 204 ~~~~~~~---------------------------------~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~ 248 (435)
T 1p22_A 204 EMLNTLI---------------------------------HHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITL 248 (435)
T ss_dssp CEEEEEC---------------------------------CCCSCEEEEECCT--TEEEEEETTSCEEEEECSSSSCCEE
T ss_pred cEEEEEc---------------------------------CCCCcEEEEEEcC--CEEEEeeCCCcEEEEeCCCCCCcee
Confidence 7665554 4667789999974 5899999999999999876543
Q ss_pred -EEeccCCCcEEEEEEEcCCceEEEEeCCCcEEEEEccCCCcceEEeeeeccccEEEEEecCCCCEEEEEeCCccEEEEE
Q psy710 202 -HVRHETDAAVIQMQFLTNEGALITATADDSLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVN 280 (591)
Q Consensus 202 -~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~i~d 280 (591)
.....+...|.+++| ++++|++++.|+.|++||++++ +.+..+.+|...|.++.+ +++++++|+.||.|++||
T Consensus 249 ~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~--~~~~~~~~~~~~v~~~~~--~~~~l~~g~~dg~i~iwd 322 (435)
T 1p22_A 249 RRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTC--EFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWD 322 (435)
T ss_dssp EEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTC--CEEEEEECCSSCEEEEEE--ETTEEEEEETTSCEEEEE
T ss_pred eeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcC--cEEEEEcCCCCcEEEEEe--CCCEEEEEeCCCeEEEEE
Confidence 234456779999999 7789999999999999999988 788899999999999999 578999999999999999
Q ss_pred ccCccccceeeehhhhccccccCCCCCeEEEecCCCCCCeEEEEEcCCEEEEEecccce---------EEEEe-ccCCCe
Q psy710 281 IESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKLLLAYETGLVVHWDLKLKR---------AEFRW-QCSEPI 350 (591)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~iwd~~~~~---------~~~~~-~~~~~v 350 (591)
+++++. ...+.+|...|.+++| ++++|++|+.||.|++||+.+++ ....+ .|...|
T Consensus 323 ~~~~~~-----------~~~~~~h~~~v~~~~~---~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v 388 (435)
T 1p22_A 323 IECGAC-----------LRVLEGHEELVRCIRF---DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRV 388 (435)
T ss_dssp TTTCCE-----------EEEECCCSSCEEEEEC---CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCC
T ss_pred CCCCCE-----------EEEEeCCcCcEEEEEe---cCCEEEEEeCCCcEEEEECCCCCCccccccchheeeccCCCCCe
Confidence 998776 3367789999999999 45899999999999999998765 55544 489999
Q ss_pred eEEEEeecCCEEEEEecCCcEEEEecC
Q psy710 351 KSVCWHYEGKQFLCSHTDGTISTWAVR 377 (591)
Q Consensus 351 ~~~~~sp~g~~l~s~~~dg~i~vwd~~ 377 (591)
.+++| ++++|++++.||.|++||+.
T Consensus 389 ~~l~~--~~~~l~s~s~Dg~i~iwd~~ 413 (435)
T 1p22_A 389 FRLQF--DEFQIVSSSHDDTILIWDFL 413 (435)
T ss_dssp CCEEE--CSSCEEECCSSSEEEEEC--
T ss_pred EEEEe--CCCEEEEEeCCCEEEEEECC
Confidence 99999 78899999999999999998
No 102
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=6.3e-35 Score=285.72 Aligned_cols=282 Identities=11% Similarity=0.116 Sum_probs=233.0
Q ss_pred ccCCCCCCcEEEeCCC---CcEEEEEeCCCcEEEEcCC--Ccee-EeeccCCcceEEEEEeecCCEEEEecCCCeEEEEe
Q psy710 3 RHGFPYQPTAIAFDPI---QKLLAIGTKTGSLRLLGRP--GVDA-HVRHETDAAVIQMQFLTNEGALITATADDSLHLWN 76 (591)
Q Consensus 3 ~~gh~~~v~~~~~spd---g~~la~g~~dg~i~lw~~~--~~~~-~~~~~h~~~v~~l~~sp~~~~l~s~~~d~~i~vw~ 76 (591)
..+|.+.|++++|+|+ |++||+|+.||.|++||+. +... ..+.+|...|.+++|+|++++|++++.|+.|++||
T Consensus 35 ~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd 114 (368)
T 3mmy_A 35 TSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWD 114 (368)
T ss_dssp SSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred ccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEE
Confidence 4689999999999999 6999999999999999987 3444 67889999999999999999999999999999999
Q ss_pred ecccCceeeeEEEeeccceEEEEe--eCCceEEEEEeCCCcEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCC
Q psy710 77 FRQKRPEIVHSLKFQRERITYIHL--PLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDN 154 (591)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (591)
+.+++ ...+..|...|.+++| ++++++|++++.|+.|++||+.+++....+.
T Consensus 115 ~~~~~---~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~----------------------- 168 (368)
T 3mmy_A 115 LSSNQ---AIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQ----------------------- 168 (368)
T ss_dssp TTTTE---EEEEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEE-----------------------
T ss_pred cCCCC---ceeeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEe-----------------------
Confidence 99874 3346779999999999 8999999999999999999999876554443
Q ss_pred CcCcceeeeccCCCCceEEEECCCCCEEEEEeCCCcEEEeCCCCeEEEEe---ccCCCcEEEEEEEcCCce----EEEEe
Q psy710 155 PLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGVDAHVR---HETDAAVIQMQFLTNEGA----LITAT 227 (591)
Q Consensus 155 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~---~~~~~~v~~~~~~~~~~~----l~~~~ 227 (591)
....+.++.+. ...+++++.++.+++|+......... ......+..+.+.++... +++++
T Consensus 169 -----------~~~~~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (368)
T 3mmy_A 169 -----------LPERCYCADVI--YPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGS 235 (368)
T ss_dssp -----------CSSCEEEEEEE--TTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEE
T ss_pred -----------cCCCceEEEec--CCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEec
Confidence 12234555554 45788999999999999976544322 122456777777776655 99999
Q ss_pred CCCcEEEEEccCCCc-ceEEeeeeccc------------cEEEEEecCCCCEEEEEeCCccEEEEEccCccccceeeehh
Q psy710 228 ADDSLHLWNFRQKRP-EIVHSLKFQRE------------RITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWN 294 (591)
Q Consensus 228 ~d~~i~~wd~~~~~~-~~~~~~~~~~~------------~v~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~ 294 (591)
.|+.|++||++.... ..+..+..|.. .|.+++|+|++++|++++.||.|++||+.+++.
T Consensus 236 ~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~-------- 307 (368)
T 3mmy_A 236 IEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTK-------- 307 (368)
T ss_dssp TTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEE--------
T ss_pred CCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcE--------
Confidence 999999999987643 45566666655 699999999999999999999999999998776
Q ss_pred hhccccccCCCCCeEEEecCCCCCCeEEEEEcCCEEEEEec
Q psy710 295 KAIDVCMKTHPGPIIHLSDNPLDPSKLLLAYETGLVVHWDL 335 (591)
Q Consensus 295 ~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~iwd~ 335 (591)
...+..|...|.+++|+| ++++|++++.|+..+.|++
T Consensus 308 ---~~~~~~~~~~v~~~~~s~-~g~~l~~~s~d~~~~~~~~ 344 (368)
T 3mmy_A 308 ---LKTSEQLDQPISACCFNH-NGNIFAYASSYDWSKGHEF 344 (368)
T ss_dssp ---EEECCCCSSCEEEEEECT-TSSCEEEEECCCSTTCGGG
T ss_pred ---EEEecCCCCCceEEEECC-CCCeEEEEecccccccccc
Confidence 336778999999999999 9999999999875555443
No 103
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=8.8e-35 Score=278.58 Aligned_cols=278 Identities=12% Similarity=0.152 Sum_probs=227.0
Q ss_pred ceEEEEEeecCCEEEEecCCCeEEEEeecccCceeeeEEEeeccceEEEEeeCCceEEEEEeCCCcEEEEEeeeeeeece
Q psy710 50 AVIQMQFLTNEGALITATADDSLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGY 129 (591)
Q Consensus 50 ~v~~l~~sp~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~ 129 (591)
..++|+||+++ +|++| .|++|+|||+++++......+..|...|.+++|+|++++|++|+.|+.|++||+++++.+..
T Consensus 27 y~~~l~WS~~~-~lAvg-~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~ 104 (318)
T 4ggc_A 27 YLNLVDWSSGN-VLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRN 104 (318)
T ss_dssp TCBCEEECTTS-EEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEE
T ss_pred cceEEEECCCC-EEEEE-eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEE
Confidence 35679999885 66665 59999999999986333334456777899999999999999999999999999999887766
Q ss_pred ecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCCCCEEEEEeCCCcEEEeCCCCe--EEEEeccC
Q psy710 130 IINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGV--DAHVRHET 207 (591)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~--~~~~~~~~ 207 (591)
+. +|...+.+ +++++..+++++.++.+++|+.... .......+
T Consensus 105 ~~---------------------------------~h~~~~~~--~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (318)
T 4ggc_A 105 MT---------------------------------SHSARVGS--LSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGH 149 (318)
T ss_dssp EE---------------------------------CCSSCEEE--EEEETTEEEEEETTSEEEEEETTSSSCEEEEEECC
T ss_pred ec---------------------------------CccceEEE--eecCCCEEEEEecCCceEeeecCCCceeEEEEcCc
Confidence 55 34444444 4556788999999999999987654 33344556
Q ss_pred CCcEEEEEEEcCCceEEEEeCCCcEEEEEccCCCc--ceEEeeeeccccEEEEEecCCCCEE---EEEeCCccEEEEEcc
Q psy710 208 DAAVIQMQFLTNEGALITATADDSLHLWNFRQKRP--EIVHSLKFQRERITYIHLPLQSKWL---YVGTEKGNIHVVNIE 282 (591)
Q Consensus 208 ~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~--~~~~~~~~~~~~v~~~~~sp~~~~l---~~~~~dg~i~i~d~~ 282 (591)
...+..+.+.+++++|++++.|+.|++||+++++. ........+.+.|.++.++|++..+ ++++.++.|++||..
T Consensus 150 ~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~ 229 (318)
T 4ggc_A 150 SQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVC 229 (318)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETT
T ss_pred cCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecc
Confidence 77999999999999999999999999999987632 2334455677889999999977533 466788999999998
Q ss_pred CccccceeeehhhhccccccCCCCCeEEEecCCCCCCeEEEEE--cCCEEEEEecccceEEEEec-cCCCeeEEEEeecC
Q psy710 283 SFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKLLLAY--ETGLVVHWDLKLKRAEFRWQ-CSEPIKSVCWHYEG 359 (591)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~--~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp~g 359 (591)
..... ....+...+..+.|+| +++.+++++ .|+.|++||+.+++.+..+. |...|++++|+|+|
T Consensus 230 ~~~~~------------~~~~~~~~v~~~~~~~-~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg 296 (318)
T 4ggc_A 230 SGACL------------SAVDAHSQVCSILWSP-HYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDG 296 (318)
T ss_dssp TCCEE------------EEEECSSCEEEEEEET-TTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTS
T ss_pred ccccc------------ccccceeeeeeeeecc-cccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCC
Confidence 87653 3345677899999999 888887765 69999999999999988876 99999999999999
Q ss_pred CEEEEEecCCcEEEEecC
Q psy710 360 KQFLCSHTDGTISTWAVR 377 (591)
Q Consensus 360 ~~l~s~~~dg~i~vwd~~ 377 (591)
++|++++.||+|+|||+.
T Consensus 297 ~~l~S~s~D~~v~iWd~~ 314 (318)
T 4ggc_A 297 ATVASAAADETLRLWRCF 314 (318)
T ss_dssp SCEEEEETTTEEEEECCS
T ss_pred CEEEEEecCCeEEEEECC
Confidence 999999999999999997
No 104
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2e-35 Score=290.26 Aligned_cols=255 Identities=11% Similarity=0.055 Sum_probs=200.3
Q ss_pred EEEeeccceEEEEeeCCceEEEEEeCCCcEEEEEeeee--eeeceecccccccccCCCCCCCceeccCCCCcCcceeeec
Q psy710 87 SLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESF--TLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRH 164 (591)
Q Consensus 87 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (591)
.+..+.++|++++|+|++++|++++.|+.|++||+.++ +....+.
T Consensus 6 ~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~--------------------------------- 52 (377)
T 3dwl_C 6 VLHILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFS--------------------------------- 52 (377)
T ss_dssp EEEECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBC---------------------------------
T ss_pred eEecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEe---------------------------------
Confidence 34456788999999999999999999999999999976 4333332
Q ss_pred cCCCCceEEEECCCCCEEEEEeCCCcEEEeCCCCeE----EEEeccCCCcEEEEEEEcCCceEEEEeCCCcEEEEEccCC
Q psy710 165 GFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGVD----AHVRHETDAAVIQMQFLTNEGALITATADDSLHLWNFRQK 240 (591)
Q Consensus 165 ~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~----~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~ 240 (591)
+|...|.+++|+|++++|++++.|+.|++||+.+.+ ......+...|.+++|+|++++|++++.|+.|++||++..
T Consensus 53 ~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~ 132 (377)
T 3dwl_C 53 DHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQE 132 (377)
T ss_dssp CCSSCEEEEEECTTTCCEEEEETTSSEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC---
T ss_pred cCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCc
Confidence 577889999999999999999999999999998776 4455667789999999999999999999999999999877
Q ss_pred C-cceEEeeee-ccccEEEEEecCCCCEEEEEeCCccEEEEEccCccccceee--eh-----hhhccccccCCCCCeEEE
Q psy710 241 R-PEIVHSLKF-QRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYII--NW-----NKAIDVCMKTHPGPIIHL 311 (591)
Q Consensus 241 ~-~~~~~~~~~-~~~~v~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~--~~-----~~~~~~~~~~~~~~v~~~ 311 (591)
. ......+.. |...|.+++|+|++++|++++.|+.|++||+.......... .+ .......+ .|...|.++
T Consensus 133 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~ 211 (377)
T 3dwl_C 133 NDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAV 211 (377)
T ss_dssp --CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEE
T ss_pred ccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEE
Confidence 3 114566777 88999999999999999999999999999996443211000 00 00112244 899999999
Q ss_pred ecCCCCCCeEEEEEcCCEEEEEecccceE----EEE-eccCCCeeEEEEeecCCEEEEEecCCcEEEEecC
Q psy710 312 SDNPLDPSKLLLAYETGLVVHWDLKLKRA----EFR-WQCSEPIKSVCWHYEGKQFLCSHTDGTISTWAVR 377 (591)
Q Consensus 312 ~~sp~~~~~l~~~~~dg~i~iwd~~~~~~----~~~-~~~~~~v~~~~~sp~g~~l~s~~~dg~i~vwd~~ 377 (591)
+|+| ++++|++++.|+.|++||+.+++. +.. ..|...|.+++|+|++++|++++.|+.+ +|+..
T Consensus 212 ~~sp-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~ 280 (377)
T 3dwl_C 212 GFSP-SGNALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGYNYSPI-LLQGN 280 (377)
T ss_dssp EECT-TSSCEEEEETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEESSSSEE-EECCC
T ss_pred EECC-CCCEEEEEeCCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEcCCcEE-EEEeC
Confidence 9999 999999999999999999998875 333 3488899999999999999998766655 77765
No 105
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.5e-33 Score=277.22 Aligned_cols=254 Identities=13% Similarity=0.166 Sum_probs=216.5
Q ss_pred eeeEEEeeccceEEEEeeCCceEEEEEeCCCcEEEEEee--eeeeeceecccccccccCCCCCCCceeccCCCCcCccee
Q psy710 84 IVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIE--SFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKT 161 (591)
Q Consensus 84 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (591)
.+..+.+|...|.+++|+|++++|++++.|+.|++||+. +++....+.
T Consensus 3 ~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~------------------------------ 52 (379)
T 3jrp_A 3 MVVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLT------------------------------ 52 (379)
T ss_dssp --CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEEC------------------------------
T ss_pred ccEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEec------------------------------
Confidence 567889999999999999999999999999999999998 544444433
Q ss_pred eeccCCCCceEEEECCC--CCEEEEEeCCCcEEEeCCCCeE---EEEeccCCCcEEEEEEEcC--CceEEEEeCCCcEEE
Q psy710 162 FRHGFPYQPTAIAFDPI--QKLLAIGTKTGSLRLLGRPGVD---AHVRHETDAAVIQMQFLTN--EGALITATADDSLHL 234 (591)
Q Consensus 162 ~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~i~d~~~~~---~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~~ 234 (591)
+|...|.+++|+++ +++|++++.||.|++||+.+.+ ......+...|.+++|+|+ +++|++++.|+.|++
T Consensus 53 ---~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v 129 (379)
T 3jrp_A 53 ---GHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSV 129 (379)
T ss_dssp ---CCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEE
T ss_pred ---CCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEE
Confidence 57788999999987 8999999999999999998774 3344446779999999999 999999999999999
Q ss_pred EEccCCCcceEEeeeeccccEEEEEecC-------------CCCEEEEEeCCccEEEEEccCccccceeeehhhhccccc
Q psy710 235 WNFRQKRPEIVHSLKFQRERITYIHLPL-------------QSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCM 301 (591)
Q Consensus 235 wd~~~~~~~~~~~~~~~~~~v~~~~~sp-------------~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~ 301 (591)
||++.........+..|...|.+++|+| +++++++++.|+.|++||+++...... ....+
T Consensus 130 ~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~-------~~~~~ 202 (379)
T 3jrp_A 130 VEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYV-------LESTL 202 (379)
T ss_dssp EECCTTSCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEE-------EEEEE
T ss_pred EecCCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCccee-------eEEEE
Confidence 9999875456667788889999999999 699999999999999999987654210 12356
Q ss_pred cCCCCCeEEEecCCCC---CCeEEEEEcCCEEEEEecccce---EEEEec---cCCCeeEEEEeecCCEEEEEecCCcEE
Q psy710 302 KTHPGPIIHLSDNPLD---PSKLLLAYETGLVVHWDLKLKR---AEFRWQ---CSEPIKSVCWHYEGKQFLCSHTDGTIS 372 (591)
Q Consensus 302 ~~~~~~v~~~~~sp~~---~~~l~~~~~dg~i~iwd~~~~~---~~~~~~---~~~~v~~~~~sp~g~~l~s~~~dg~i~ 372 (591)
.+|...|.+++|+| + +++|++++.||.|++||+.++. ...... |...|.+++|+|++++|++++.||.|+
T Consensus 203 ~~h~~~v~~~~~sp-~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~ 281 (379)
T 3jrp_A 203 EGHSDWVRDVAWSP-TVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVT 281 (379)
T ss_dssp CCCSSCEEEEEECC-CCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEE
T ss_pred ecccCcEeEEEECC-CCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEE
Confidence 78999999999999 8 8999999999999999999863 222222 788999999999999999999999999
Q ss_pred EEecCC
Q psy710 373 TWAVRP 378 (591)
Q Consensus 373 vwd~~~ 378 (591)
+|++..
T Consensus 282 iw~~~~ 287 (379)
T 3jrp_A 282 LWKENL 287 (379)
T ss_dssp EEEEEE
T ss_pred EEeCCC
Confidence 999983
No 106
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.6e-36 Score=295.69 Aligned_cols=287 Identities=9% Similarity=0.060 Sum_probs=227.6
Q ss_pred cCCCCCCcEEEeCCCCcEEEEEeCCCcEEEEcCCCceeEeeccCCcceEEEEEeecCCEEEEecCCCeEEEEeecccCce
Q psy710 4 HGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGVDAHVRHETDAAVIQMQFLTNEGALITATADDSLHLWNFRQKRPE 83 (591)
Q Consensus 4 ~gh~~~v~~~~~spdg~~la~g~~dg~i~lw~~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~~~d~~i~vw~~~~~~~~ 83 (591)
.||+..|.+++|+|+| .++.+.+|+.++.....+ .|...|.+++|||+|++||+++.||.|++||.+.
T Consensus 49 ~gh~~~v~~V~FsPdg-------~~~~~~~~~~~~~~~~~~-~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~---- 116 (588)
T 2j04_A 49 NCNSKNLFHVKEFPLE-------FENKLDFELAQQNGLLNS-QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK---- 116 (588)
T ss_dssp SSBGGGTEEEEEECCC-------CCCTTTTSCCCSSCSSTT-SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE----
T ss_pred cCCCccEEEEEECCCC-------CcceEEEEeCCCceEeec-CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc----
Confidence 4899999999999999 567777777655444433 4588999999999999999999999999999543
Q ss_pred eeeEEEeecc-----ceEEEEeeCCceEEEEEeCCCcEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCc
Q psy710 84 IVHSLKFQRE-----RITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDP 158 (591)
Q Consensus 84 ~~~~~~~~~~-----~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (591)
.+..+. |.. .|.+++|+|||++|++|+.||+|++||+.++..... .+-.
T Consensus 117 ~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~-------------------------~~i~ 170 (588)
T 2j04_A 117 MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTP-------------------------EFYF 170 (588)
T ss_dssp EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCC-------------------------CCEE
T ss_pred eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccc-------------------------ccee
Confidence 556666 655 499999999999999999999999999988542000 0000
Q ss_pred ceee---eccCCCCceEEEECCCCCEEEEEeCCCcEEEeCCCCeEEE-----EeccCCCcEEEEEEEcCCceEEEEeCCC
Q psy710 159 SKTF---RHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGVDAH-----VRHETDAAVIQMQFLTNEGALITATADD 230 (591)
Q Consensus 159 ~~~~---~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-----~~~~~~~~v~~~~~~~~~~~l~~~~~d~ 230 (591)
..++ ..+|...|.+++|+|+| +++++.|+.|++|++.+.... ....+...|.+++|+ ++.|++++ ++
T Consensus 171 l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs--g~~LASa~-~~ 245 (588)
T 2j04_A 171 ESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV--DYKVVLTC-PG 245 (588)
T ss_dssp EEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE--TTEEEEEC-SS
T ss_pred eeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE--CCEEEEEe-CC
Confidence 1111 14677899999999999 888999999999999876631 222455789999999 68888887 69
Q ss_pred cEEEEEccCCCcceEEeeeeccccEEEEEe--cCCCCEEEEEeCCccEEEEEccCccccceeeehhhhccccccCCCCCe
Q psy710 231 SLHLWNFRQKRPEIVHSLKFQRERITYIHL--PLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPI 308 (591)
Q Consensus 231 ~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~--sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v 308 (591)
+|++||+.++ +......+|...+..++| +|++..++++++||+ ++|...
T Consensus 246 tIkLWd~~~~--~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~d-------------------------- 296 (588)
T 2j04_A 246 YVHKIDLKNY--SISSLKTGSLENFHIIPLNHEKESTILLMSNKTSY-KVLLED-------------------------- 296 (588)
T ss_dssp EEEEEETTTT--EEEEEECSCCSCCCEEEETTCSSCEEEEECSSCEE-EEEESS--------------------------
T ss_pred eEEEEECCCC--eEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeec--------------------------
Confidence 9999999987 442333379999999999 999999999999999 999854
Q ss_pred EEEecCCCCCCeEEEEEcCCEEEEEecccceEEEEeccCCCeeEEEEeecCCEEEEEec
Q psy710 309 IHLSDNPLDPSKLLLAYETGLVVHWDLKLKRAEFRWQCSEPIKSVCWHYEGKQFLCSHT 367 (591)
Q Consensus 309 ~~~~~sp~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~g~~l~s~~~ 367 (591)
.++++| ++..+++. |+++++|+...+... .+.+...|.+++|||||+.+|+++.
T Consensus 297 -~~~~sp-d~~l~a~~--d~~v~lW~~~g~~l~-~~~~~~~I~~va~SPdG~~lA~~~~ 350 (588)
T 2j04_A 297 -ELHVTA-DNIIAPYL--EKKFKKWSTIWNEFN-NYETTLVIHGISLSPDGYSIAIVYD 350 (588)
T ss_dssp -SEEEEC-CCSSHHHH--HHHHHHTTTTTTSSS-SSCCEEEEEEEEECTTSSEEEEEEE
T ss_pred -cEEECC-CceEEEEc--CCEEEEEECCCCcee-eeccceEEEEEEECCCCCEEEEEEe
Confidence 155888 88887775 899999998766533 4445566999999999999999874
No 107
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=4.3e-34 Score=283.14 Aligned_cols=291 Identities=12% Similarity=0.130 Sum_probs=233.0
Q ss_pred CCcEEEeCCCCcEE-EEEeCCCcEEEEcCCC-----ceeEeeccCCcceEEEEEee-cCCEEEEecCCCeEEEEeecccC
Q psy710 9 QPTAIAFDPIQKLL-AIGTKTGSLRLLGRPG-----VDAHVRHETDAAVIQMQFLT-NEGALITATADDSLHLWNFRQKR 81 (591)
Q Consensus 9 ~v~~~~~spdg~~l-a~g~~dg~i~lw~~~~-----~~~~~~~~h~~~v~~l~~sp-~~~~l~s~~~d~~i~vw~~~~~~ 81 (591)
....++++|+...+ ++++.||.|+||++.. .....+.+|.+.|.+++|+| ++++|++++.|++|++||+.++.
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~ 115 (402)
T 2aq5_A 36 DSGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGG 115 (402)
T ss_dssp SSCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTC
T ss_pred CCCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCC
Confidence 34568899987544 4578899999999863 24556789999999999999 89999999999999999998873
Q ss_pred c-----eeeeEEEeeccceEEEEeeCCc-eEEEEEeCCCcEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCCC
Q psy710 82 P-----EIVHSLKFQRERITYIHLPLQS-KWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNP 155 (591)
Q Consensus 82 ~-----~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (591)
. ..+..+.+|...|.+++|+|++ +.|++++.|+.|++||+.+++....+..
T Consensus 116 ~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~----------------------- 172 (402)
T 2aq5_A 116 LVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGP----------------------- 172 (402)
T ss_dssp CSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECT-----------------------
T ss_pred CccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEec-----------------------
Confidence 2 3567888999999999999998 6999999999999999998776555410
Q ss_pred cCcceeeeccCCCCceEEEECCCCCEEEEEeCCCcEEEeCCCCeEEEEec--cCCC-cEEEEEEEcCCceEEEE---eCC
Q psy710 156 LDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGVDAHVRH--ETDA-AVIQMQFLTNEGALITA---TAD 229 (591)
Q Consensus 156 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~--~~~~-~v~~~~~~~~~~~l~~~---~~d 229 (591)
.+|...|.+++|+|++++|++++.||.|++||+.+.+..... .+.. .+.++.|+|++++|+++ +.|
T Consensus 173 --------~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d 244 (402)
T 2aq5_A 173 --------DVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSE 244 (402)
T ss_dssp --------TTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCC
T ss_pred --------CCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCC
Confidence 246778999999999999999999999999999887766543 3433 48999999999999999 789
Q ss_pred CcEEEEEccCCCcceEEeeeeccccEEEEEecCCCCEEE-EEeCCccEEEEEccCccccceeeehhhhccccccCCCCCe
Q psy710 230 DSLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWLY-VGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPI 308 (591)
Q Consensus 230 ~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~-~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v 308 (591)
+.|++||+++...........+...+.+++|+|++++++ +++.|+.|++||+.+++..-.. . ....|...|
T Consensus 245 ~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~-------l-~~~~~~~~v 316 (402)
T 2aq5_A 245 RQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHY-------L-SMFSSKESQ 316 (402)
T ss_dssp EEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEE-------E-EEECCSSCC
T ss_pred ceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEe-------e-cccccCCcc
Confidence 999999998864212122224557899999999999986 4557999999999987631000 1 111266899
Q ss_pred EEEecCCCCCCeEEEEEcCCEEEEEecccceEE
Q psy710 309 IHLSDNPLDPSKLLLAYETGLVVHWDLKLKRAE 341 (591)
Q Consensus 309 ~~~~~sp~~~~~l~~~~~dg~i~iwd~~~~~~~ 341 (591)
.+++|+| ++.++++ .++.+++|++.++++.
T Consensus 317 ~~~~~sp-~~~~~~s--~~~~~~~~~l~~~~~~ 346 (402)
T 2aq5_A 317 RGMGYMP-KRGLEVN--KCEIARFYKLHERKCE 346 (402)
T ss_dssp SEEEECC-GGGSCGG--GTEEEEEEEEETTEEE
T ss_pred cceEEec-cccccee--cceeEEEEEcCCCcEE
Confidence 9999999 8888765 5679999999886643
No 108
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=100.00 E-value=1.3e-32 Score=275.53 Aligned_cols=319 Identities=11% Similarity=0.116 Sum_probs=253.9
Q ss_pred CCCCcEEE---eCCCCcEEEEEe--------------CCC--cEEEEcCCC---ceeEeeccCCcceEEEEEeecCCEEE
Q psy710 7 PYQPTAIA---FDPIQKLLAIGT--------------KTG--SLRLLGRPG---VDAHVRHETDAAVIQMQFLTNEGALI 64 (591)
Q Consensus 7 ~~~v~~~~---~spdg~~la~g~--------------~dg--~i~lw~~~~---~~~~~~~~h~~~v~~l~~sp~~~~l~ 64 (591)
...+..++ |+|+++.+++.+ .++ .|..+|..+ .....+..+ ..+.+++|+|++.+++
T Consensus 60 ~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~ 138 (433)
T 3bws_A 60 NIALVEMAIPVYKDEKEIELKLSSPGFQNSSYRIRKPEELNEKLIALDKEGITHRFISRFKTG-FQPKSVRFIDNTRLAI 138 (433)
T ss_dssp TEEEEEEEEECCCTTCCEEEEEECTTBCCEEEEESSGGGGTTCEEECCBTTCSEEEEEEEECS-SCBCCCEESSSSEEEE
T ss_pred CCccEEEEEeeccCCCcEEEEEEccccCcceeeecccCCCceEEEEECCCCCcceEEEEEcCC-CCceEEEEeCCCeEEE
Confidence 34567788 899887666443 223 444444433 233344444 4566999999777888
Q ss_pred EecCCCeEEEEeecccCceeee-----EEEeeccceEEEEeeCCceEEEEEeCCCcEEEEEeeeeeeeceeccccccccc
Q psy710 65 TATADDSLHLWNFRQKRPEIVH-----SLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDV 139 (591)
Q Consensus 65 s~~~d~~i~vw~~~~~~~~~~~-----~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~ 139 (591)
+++.|+.|++||+.+++ ... .+.+|...|.+++|+++++.+++++.|+.|++||+.+++....+.
T Consensus 139 ~~~~~~~i~~~d~~~g~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~-------- 208 (433)
T 3bws_A 139 PLLEDEGMDVLDINSGQ--TVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVD-------- 208 (433)
T ss_dssp EBTTSSSEEEEETTTCC--EEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEE--------
T ss_pred EeCCCCeEEEEECCCCe--EeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEc--------
Confidence 88889999999999875 333 344677899999999999999999999999999998876655443
Q ss_pred CCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCCCCEEEEE-eCCCcEEEeCCCCeEEEEeccCCCcEEEEEEEc
Q psy710 140 CMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIG-TKTGSLRLLGRPGVDAHVRHETDAAVIQMQFLT 218 (591)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~~~~~v~~~~~~~ 218 (591)
.+...+.+++|+|+++.++++ +.++.|++||+.+.+..........+.+++|+|
T Consensus 209 -------------------------~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~ 263 (433)
T 3bws_A 209 -------------------------LTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKIGLPRGLLLSK 263 (433)
T ss_dssp -------------------------CSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCCSEEEEEEECT
T ss_pred -------------------------CCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCCCCceEEEEcC
Confidence 345668999999999888554 479999999999888777666667899999999
Q ss_pred CCceEEEEe--------CCCcEEEEEccCCCcceEEeeeeccccEEEEEecCCCCEE-EEEeCCccEEEEEccCccccce
Q psy710 219 NEGALITAT--------ADDSLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWL-YVGTEKGNIHVVNIESFTLSGY 289 (591)
Q Consensus 219 ~~~~l~~~~--------~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l-~~~~~dg~i~i~d~~~~~~~~~ 289 (591)
+++++++++ .|+.|++||+.++ +.+..+ .+...+.+++|+|+++.+ ++++.++.|++||+.+++...
T Consensus 264 ~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~--~~~~~~-~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~- 339 (433)
T 3bws_A 264 DGKELYIAQFSASNQESGGGRLGIYSMDKE--KLIDTI-GPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQK- 339 (433)
T ss_dssp TSSEEEEEEEESCTTCSCCEEEEEEETTTT--EEEEEE-EEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEE-
T ss_pred CCCEEEEEECCCCccccCCCeEEEEECCCC--cEEeec-cCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEE-
Confidence 999999887 4889999999987 555544 445688999999999755 566899999999999876531
Q ss_pred eeehhhhccccccCCCCCeEEEecCCCCCCeEEEEEc---------------CCEEEEEecccceEEEEeccCCCeeEEE
Q psy710 290 IINWNKAIDVCMKTHPGPIIHLSDNPLDPSKLLLAYE---------------TGLVVHWDLKLKRAEFRWQCSEPIKSVC 354 (591)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~---------------dg~i~iwd~~~~~~~~~~~~~~~v~~~~ 354 (591)
.+ .+...+.+++|+| ++++|++++. ||.|++||+.+++....+.....+.+++
T Consensus 340 ----------~~-~~~~~~~~~~~s~-dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~~~~~~~~~ 407 (433)
T 3bws_A 340 ----------SI-PVFDKPNTIALSP-DGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEAGNQPTGLD 407 (433)
T ss_dssp ----------EE-ECSSSEEEEEECT-TSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEECSSSEEEEE
T ss_pred ----------Ee-cCCCCCCeEEEcC-CCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecCCCCCceEE
Confidence 22 3567799999999 9999988876 5799999999999998888888899999
Q ss_pred EeecCCEEEEEec-CCcEEEEecC
Q psy710 355 WHYEGKQFLCSHT-DGTISTWAVR 377 (591)
Q Consensus 355 ~sp~g~~l~s~~~-dg~i~vwd~~ 377 (591)
|+|+|++|++++. |+.|++|+++
T Consensus 408 ~s~dg~~l~~~~~~d~~i~v~~~~ 431 (433)
T 3bws_A 408 VSPDNRYLVISDFLDHQIRVYRRD 431 (433)
T ss_dssp ECTTSCEEEEEETTTTEEEEEEET
T ss_pred EcCCCCEEEEEECCCCeEEEEEec
Confidence 9999999998875 9999999987
No 109
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=1.4e-33 Score=279.44 Aligned_cols=288 Identities=10% Similarity=0.053 Sum_probs=231.7
Q ss_pred ceEEEEEeecCCEEE-EecCCCeEEEEeecccCc--eeeeEEEeeccceEEEEeeC-CceEEEEEeCCCcEEEEEeeeee
Q psy710 50 AVIQMQFLTNEGALI-TATADDSLHLWNFRQKRP--EIVHSLKFQRERITYIHLPL-QSKWLYVGTEKGNIHVVNIESFT 125 (591)
Q Consensus 50 ~v~~l~~sp~~~~l~-s~~~d~~i~vw~~~~~~~--~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~vwd~~~~~ 125 (591)
....++++|+...++ +++.||.|++|++..... .....+.+|...|.+++|+| ++++|++++.|+.|++||+.++.
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~ 115 (402)
T 2aq5_A 36 DSGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGG 115 (402)
T ss_dssp SSCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTC
T ss_pred CCCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCC
Confidence 344578888765444 578899999999865321 23456788999999999999 99999999999999999998754
Q ss_pred eeceecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCCC-CEEEEEeCCCcEEEeCCCCeEEEEe
Q psy710 126 LSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQ-KLLAIGTKTGSLRLLGRPGVDAHVR 204 (591)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~ 204 (591)
...... +....+ .+|...|.+++|+|++ ++|++++.||.|++||+.+.+....
T Consensus 116 ~~~~~~-------------------------~~~~~~-~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 169 (402)
T 2aq5_A 116 LVLPLR-------------------------EPVITL-EGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLT 169 (402)
T ss_dssp CSSCBC-------------------------SCSEEE-ECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEE
T ss_pred CccccC-------------------------CceEEe-cCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEE
Confidence 221110 112222 3688899999999998 6999999999999999988877654
Q ss_pred c---cCCCcEEEEEEEcCCceEEEEeCCCcEEEEEccCCCcceEEee-eecccc-EEEEEecCCCCEEEEE---eCCccE
Q psy710 205 H---ETDAAVIQMQFLTNEGALITATADDSLHLWNFRQKRPEIVHSL-KFQRER-ITYIHLPLQSKWLYVG---TEKGNI 276 (591)
Q Consensus 205 ~---~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~-~~~~~~-v~~~~~sp~~~~l~~~---~~dg~i 276 (591)
. .+...|.+++|+|++++|++++.|+.|++||++++ +.+..+ ..|.+. +.++.|+|+++++++| +.|+.|
T Consensus 170 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i 247 (402)
T 2aq5_A 170 LGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKG--TVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQV 247 (402)
T ss_dssp ECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTT--EEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEE
T ss_pred EecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCC--ceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceE
Confidence 3 46789999999999999999999999999999987 677777 677665 8999999999999999 799999
Q ss_pred EEEEccCccccceeeehhhhccccccCCCCCeEEEecCCCCCCeEEE-EEcCCEEEEEecccce--E--EEEeccCCCee
Q psy710 277 HVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKLLL-AYETGLVVHWDLKLKR--A--EFRWQCSEPIK 351 (591)
Q Consensus 277 ~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~-~~~dg~i~iwd~~~~~--~--~~~~~~~~~v~ 351 (591)
++||+.+.+... ......|...+.+++|+| ++++|++ ++.|+.|++||+.+++ . +..+.+...|.
T Consensus 248 ~iwd~~~~~~~~---------~~~~~~~~~~v~~~~~s~-~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~ 317 (402)
T 2aq5_A 248 ALWDTKHLEEPL---------SLQELDTSSGVLLPFFDP-DTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQR 317 (402)
T ss_dssp EEEETTBCSSCS---------EEEECCCCSSCEEEEEET-TTTEEEEEETTCSCEEEEEECSSTTCEEEEEEECCSSCCS
T ss_pred EEEcCccccCCc---------eEEeccCCCceeEEEEcC-CCCEEEEEEcCCCeEEEEEecCCCcceEeecccccCCccc
Confidence 999998865421 112235677899999999 9998876 4479999999999877 2 23334679999
Q ss_pred EEEEeecCCEEEEEecCCcEEEEecC
Q psy710 352 SVCWHYEGKQFLCSHTDGTISTWAVR 377 (591)
Q Consensus 352 ~~~~sp~g~~l~s~~~dg~i~vwd~~ 377 (591)
+++|+|++.++++ .++.+++|++.
T Consensus 318 ~~~~sp~~~~~~s--~~~~~~~~~l~ 341 (402)
T 2aq5_A 318 GMGYMPKRGLEVN--KCEIARFYKLH 341 (402)
T ss_dssp EEEECCGGGSCGG--GTEEEEEEEEE
T ss_pred ceEEeccccccee--cceeEEEEEcC
Confidence 9999999998775 56799999998
No 110
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=100.00 E-value=7e-32 Score=298.78 Aligned_cols=341 Identities=7% Similarity=-0.016 Sum_probs=259.0
Q ss_pred cCCCCCCcEEEeCCCCcEEEEEeCC------CcEEEEcCCCceeEeeccCCcce-------EEEEEeecCCEEEEecCC-
Q psy710 4 HGFPYQPTAIAFDPIQKLLAIGTKT------GSLRLLGRPGVDAHVRHETDAAV-------IQMQFLTNEGALITATAD- 69 (591)
Q Consensus 4 ~gh~~~v~~~~~spdg~~la~g~~d------g~i~lw~~~~~~~~~~~~h~~~v-------~~l~~sp~~~~l~s~~~d- 69 (591)
.+|...+.+++|||||++||+++.+ ..|++|++.+.....+..|...+ ..++|+|||+.+++++.+
T Consensus 49 t~~~~~v~~~~~SPDG~~la~~s~~~~~~~~~~i~~~d~~~g~~~~lt~~~~~~~~~~~~~~~~~~SpDg~ll~~~~~~~ 128 (1045)
T 1k32_A 49 VSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGEIKRITYFSGKSTGRRMFTDVAGFDPDGNLIISTDAMQ 128 (1045)
T ss_dssp ECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTEEEECCCCCEEEETTEECSEEEEECTTCCEEEEECTTS
T ss_pred eeCCCcccCeEECCCCCEEEEEEeeccCCCCCeEEEEECCCCCeEEcccCCCcccccccccccccCCCCCEEEEEECCcC
Confidence 4688899999999999999988643 37999999887788899999888 999999999977777654
Q ss_pred -----CeEEEEeecccCcee-----------------------------------------------eeEEEeeccceEE
Q psy710 70 -----DSLHLWNFRQKRPEI-----------------------------------------------VHSLKFQRERITY 97 (591)
Q Consensus 70 -----~~i~vw~~~~~~~~~-----------------------------------------------~~~~~~~~~~v~~ 97 (591)
..|.+|++.+++... ...+..|...+.+
T Consensus 129 ~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~spG~l~~~~~~~~~~~~~~~~g~~~~~lw~~~~~~~~~~l~~~~~~v~~ 208 (1045)
T 1k32_A 129 PFSSMTCLYRVENDGINFVPLNLGPATHILFADGRRVIGRNTFELPHWKGYRGGTRGKIWIEVNSGAFKKIVDMSTHVSS 208 (1045)
T ss_dssp SSTTCCEEEEEEGGGTEEEECCSCSCSEEEEETTEEEEEESCSCCTTSTTCCSTTCCEEEEEEETTEEEEEECCSSCCEE
T ss_pred CCcccceEEEEECCCCCeEEecCCCcceeeeCCCEEEEeccCCCccccccccCCCcCCEEEECCCCCeEECcCCCCcccc
Confidence 357777776553111 0122334455566
Q ss_pred EEeeCCceEEEEEeCCCcEEEEEeee-eeeeceecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEEC
Q psy710 98 IHLPLQSKWLYVGTEKGNIHVVNIES-FTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFD 176 (591)
Q Consensus 98 ~~~~~~~~~l~~~~~d~~i~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 176 (591)
+.|+++ ..+++++.++.+.+|.+.. +... ..+ ..+ ..+...+|+
T Consensus 209 ~~~s~d-~l~~~~~~dg~~~l~~~~~~g~~~--------------------------------~~l-~~~-~~~~~~~~S 253 (1045)
T 1k32_A 209 PVIVGH-RIYFITDIDGFGQIYSTDLDGKDL--------------------------------RKH-TSF-TDYYPRHLN 253 (1045)
T ss_dssp EEEETT-EEEEEECTTSSCEEEEEETTSCSC--------------------------------EEC-CCC-CSSCEEEEE
T ss_pred eEEeCC-EEEEEEeccCceEEEEEeCCCCcc--------------------------------eEe-cCC-CCcceeeEc
Confidence 666665 4555555566666666542 1111 111 112 235678999
Q ss_pred CCCCEEEEEeCCCcEEEeCCCCeEEEEecc-----------CCCcEEEEEEE-cCCceEEEEeCCCcEEEEEccCCCcce
Q psy710 177 PIQKLLAIGTKTGSLRLLGRPGVDAHVRHE-----------TDAAVIQMQFL-TNEGALITATADDSLHLWNFRQKRPEI 244 (591)
Q Consensus 177 ~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-----------~~~~v~~~~~~-~~~~~l~~~~~d~~i~~wd~~~~~~~~ 244 (591)
|+|+.++.+. ++.|++|+........... +...+..++|+ |+|++|++++ ++.+.+|+...+ ..
T Consensus 254 pDG~~la~~~-~~~i~~~d~~~~~l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~--~~ 329 (1045)
T 1k32_A 254 TDGRRILFSK-GGSIYIFNPDTEKIEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGT--YV 329 (1045)
T ss_dssp ESSSCEEEEE-TTEEEEECTTTCCEEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSS--BE
T ss_pred CCCCEEEEEe-CCEEEEecCCceEeeeeccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCCCC--ce
Confidence 9999888874 8999999986555442222 12268999999 9999999888 789999999876 33
Q ss_pred EEeeeeccc-cEEEEEecCCCCEEEEEeCCccEE-EEEccCccccceeeehhhhccccccCCCCCeEEEecCCCCCCeEE
Q psy710 245 VHSLKFQRE-RITYIHLPLQSKWLYVGTEKGNIH-VVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKLL 322 (591)
Q Consensus 245 ~~~~~~~~~-~v~~~~~sp~~~~l~~~~~dg~i~-i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~ 322 (591)
..+..+.. .+..++|+ ||+.+++++.++.+. +|++.+++.. .+..|...+..++|+| |+++|+
T Consensus 330 -~~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~------------~l~~~~~~~~~~~~Sp-DG~~la 394 (1045)
T 1k32_A 330 -LKVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAE------------KFEENLGNVFAMGVDR-NGKFAV 394 (1045)
T ss_dssp -EECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEE------------ECCCCCCSEEEEEECT-TSSEEE
T ss_pred -EEccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCce------------EecCCccceeeeEECC-CCCEEE
Confidence 34556666 89999999 999999999888888 9998876542 2337778899999999 999999
Q ss_pred EEEcCCEEEEEecccceEEEEe-ccCCCeeEEEEeecCCEEEEEecCC----------cEEEEecCCCCCceeeeccccc
Q psy710 323 LAYETGLVVHWDLKLKRAEFRW-QCSEPIKSVCWHYEGKQFLCSHTDG----------TISTWAVRPLAKPVSVNQPHIK 391 (591)
Q Consensus 323 ~~~~dg~i~iwd~~~~~~~~~~-~~~~~v~~~~~sp~g~~l~s~~~dg----------~i~vwd~~~~~~~~~~~~~~~~ 391 (591)
+++.++.|++||+.+++..... .|...+.+++|+|||++|++++.++ .|++||+. +++ ...+..|
T Consensus 395 ~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~-~g~-~~~l~~~-- 470 (1045)
T 1k32_A 395 VANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDME-GRK-IFAATTE-- 470 (1045)
T ss_dssp EEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETT-TTE-EEECSCS--
T ss_pred EECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECC-CCc-EEEeeCC--
Confidence 9999999999999999988777 5888899999999999999887654 89999998 555 6667777
Q ss_pred ccCCCCCCCCCcceEEEEee
Q psy710 392 TNKDGKLEQCKPIQKVEWKH 411 (591)
Q Consensus 392 ~~~~~~~~~~~~i~~~~~~~ 411 (591)
...+..++|+|
T Consensus 471 ---------~~~~~~~~~sp 481 (1045)
T 1k32_A 471 ---------NSHDYAPAFDA 481 (1045)
T ss_dssp ---------SSBEEEEEECT
T ss_pred ---------CcccCCceEcC
Confidence 67788899987
No 111
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=7.2e-33 Score=268.61 Aligned_cols=288 Identities=12% Similarity=0.098 Sum_probs=210.7
Q ss_pred EEcCC-CceeEeeccCCcceEEEEEeecCCEEEEecCCCeEEEEeecccCceeeeEEEeeccceEEEEeeCCceEE-EEE
Q psy710 33 LLGRP-GVDAHVRHETDAAVIQMQFLTNEGALITATADDSLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWL-YVG 110 (591)
Q Consensus 33 lw~~~-~~~~~~~~~h~~~v~~l~~sp~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~ 110 (591)
||++. ...+.....|...|.+++|+|||++|++|+.++ +++|+++.++ ..... +...+..+++.++++.+ +++
T Consensus 3 i~s~~~~~~~~~~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~--~~~~~--~~~~~~~~~~~~~~~~~~~~~ 77 (355)
T 3vu4_A 3 LGSMITRNPIVPENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVA--HIMSQ--EMRHLSKVRMLHRTNYVAFVT 77 (355)
T ss_dssp ----------------CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEE--EEEEE--ECSCCCEEEECTTSSEEEEEC
T ss_pred cccccccCCccccccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcc--eeeee--ecCCeEEEEEcCCCCEEEEEE
Confidence 34444 344556788999999999999999999998765 7899998763 23222 22357778888888877 556
Q ss_pred eCCCcEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCCCCEEEEEeCCCc
Q psy710 111 TEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTKTGS 190 (591)
Q Consensus 111 ~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~ 190 (591)
+.|+.|++||..+++.+..+. +...|.+++++++. ++++ .++.
T Consensus 78 ~~d~~v~iWd~~~~~~~~~~~----------------------------------~~~~v~~v~~~~~~--~~~~-~~~~ 120 (355)
T 3vu4_A 78 GVKEVVHIWDDVKKQDVSRIK----------------------------------VDAPVKDLFLSREF--IVVS-YGDV 120 (355)
T ss_dssp SSTTEEEEEETTTTEEEEEEE----------------------------------CSSCEEEEEECSSE--EEEE-ETTE
T ss_pred CCccEEEEEECCCCcEEEEEE----------------------------------CCCceEEEEEcCCE--EEEE-EcCE
Confidence 778999999999887665543 34568999999875 4444 3789
Q ss_pred EEEeCCCCe-EEEEeccCCCcEEEEEEEcCCceEEE--EeCCCcEEEEEccCCCc-------------ce-EEeeeeccc
Q psy710 191 LRLLGRPGV-DAHVRHETDAAVIQMQFLTNEGALIT--ATADDSLHLWNFRQKRP-------------EI-VHSLKFQRE 253 (591)
Q Consensus 191 i~i~d~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~--~~~d~~i~~wd~~~~~~-------------~~-~~~~~~~~~ 253 (591)
|++||+.+. +....... +...+++++ .++++ ++.||.|++||++++.. .+ +..+.+|..
T Consensus 121 i~i~d~~~~~~~~~~~~~--~~~~~~~s~--~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~ 196 (355)
T 3vu4_A 121 ISVFKFGNPWKRITDDIR--FGGVCEFSN--GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTN 196 (355)
T ss_dssp EEEEESSTTCCBSSCCEE--EEEEEEEET--TEEEEEESSCTTCEEEEECCC------------------CCEEECCCSS
T ss_pred EEEEECCCCceeeEEecc--CCceEEEEc--cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCC
Confidence 999999876 33222221 445566776 56665 58899999999987520 01 677889999
Q ss_pred cEEEEEecCCCCEEEEEeCCcc-EEEEEccCccccceeeehhhhcccccc-C-CCCCeEEEecCCCCCCeEEEEEcCCEE
Q psy710 254 RITYIHLPLQSKWLYVGTEKGN-IHVVNIESFTLSGYIINWNKAIDVCMK-T-HPGPIIHLSDNPLDPSKLLLAYETGLV 330 (591)
Q Consensus 254 ~v~~~~~sp~~~~l~~~~~dg~-i~i~d~~~~~~~~~~~~~~~~~~~~~~-~-~~~~v~~~~~sp~~~~~l~~~~~dg~i 330 (591)
.|.+++|+|++++|++|+.|++ |++||+++++.. ..+. + |...|.+++|+| ++++|++++.|+.|
T Consensus 197 ~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~-----------~~~~~g~h~~~v~~~~~s~-~~~~l~s~s~d~~v 264 (355)
T 3vu4_A 197 PIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLV-----------REFRRGLDRADVVDMKWST-DGSKLAVVSDKWTL 264 (355)
T ss_dssp CEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEE-----------EEEECTTCCSCEEEEEECT-TSCEEEEEETTCEE
T ss_pred ceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEE-----------EEEEcCCCCCcEEEEEECC-CCCEEEEEECCCEE
Confidence 9999999999999999999998 999999988763 2444 4 999999999999 99999999999999
Q ss_pred EEEecccceEE--EE--------------------ec--cCCCeeEEEEeecCCEEEEEecCCcEEEEecCC
Q psy710 331 VHWDLKLKRAE--FR--------------------WQ--CSEPIKSVCWHYEGKQFLCSHTDGTISTWAVRP 378 (591)
Q Consensus 331 ~iwd~~~~~~~--~~--------------------~~--~~~~v~~~~~sp~g~~l~s~~~dg~i~vwd~~~ 378 (591)
++||+..+... .. +. .......++|++++++|++++.||.+++|++..
T Consensus 265 ~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~~~~ 336 (355)
T 3vu4_A 265 HVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVVVWPHTRMIETFKVVF 336 (355)
T ss_dssp EEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEEEETTTTEEEEEEEEE
T ss_pred EEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCCCCEEEEEeCCCeEEEEEEEc
Confidence 99999764311 00 11 122347799999999999999999999999983
No 112
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=3.5e-32 Score=263.79 Aligned_cols=286 Identities=12% Similarity=0.125 Sum_probs=213.6
Q ss_pred cCCCCCCcEEEeCCCCcEEEEEeCCCcEEEEcCCCceeEeeccCCcceEEEEEeecCCEE-EEecCCCeEEEEeecccCc
Q psy710 4 HGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGVDAHVRHETDAAVIQMQFLTNEGAL-ITATADDSLHLWNFRQKRP 82 (591)
Q Consensus 4 ~gh~~~v~~~~~spdg~~la~g~~dg~i~lw~~~~~~~~~~~~h~~~v~~l~~sp~~~~l-~s~~~d~~i~vw~~~~~~~ 82 (591)
.+|.+.|++++|+|||++||+|+.++ +++|+.+.........+ ..+..+++.++++.+ ++++.|++|++||..+++
T Consensus 16 ~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~- 92 (355)
T 3vu4_A 16 NHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQEM-RHLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQ- 92 (355)
T ss_dssp ---CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEEEEC-SCCCEEEECTTSSEEEEECSSTTEEEEEETTTTE-
T ss_pred ccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeeeeec-CCeEEEEEcCCCCEEEEEECCccEEEEEECCCCc-
Confidence 57999999999999999999998775 78999874433322222 357888999988887 467788999999999874
Q ss_pred eeeeEEEeeccceEEEEeeCCceEEEEEeCCCcEEEEEeeee-eeeceecccccccccCCCCCCCceeccCCCCcCccee
Q psy710 83 EIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESF-TLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKT 161 (591)
Q Consensus 83 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (591)
.+..+. +...|.+++|+++. ++++ .++.|++||+.++ +.+..+..
T Consensus 93 -~~~~~~-~~~~v~~v~~~~~~--~~~~-~~~~i~i~d~~~~~~~~~~~~~----------------------------- 138 (355)
T 3vu4_A 93 -DVSRIK-VDAPVKDLFLSREF--IVVS-YGDVISVFKFGNPWKRITDDIR----------------------------- 138 (355)
T ss_dssp -EEEEEE-CSSCEEEEEECSSE--EEEE-ETTEEEEEESSTTCCBSSCCEE-----------------------------
T ss_pred -EEEEEE-CCCceEEEEEcCCE--EEEE-EcCEEEEEECCCCceeeEEecc-----------------------------
Confidence 566666 66789999998865 3333 4689999999875 43332221
Q ss_pred eeccCCCCceEEEECCCCCEEEE--EeCCCcEEEeCCCCeE-----------------EEEeccCCCcEEEEEEEcCCce
Q psy710 162 FRHGFPYQPTAIAFDPIQKLLAI--GTKTGSLRLLGRPGVD-----------------AHVRHETDAAVIQMQFLTNEGA 222 (591)
Q Consensus 162 ~~~~~~~~v~~~~~~~~~~~l~~--~~~dg~i~i~d~~~~~-----------------~~~~~~~~~~v~~~~~~~~~~~ 222 (591)
....+++++ +++++ |+.+|.|++||+.+.. ......|...|.+++|+|++++
T Consensus 139 -------~~~~~~~s~--~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~ 209 (355)
T 3vu4_A 139 -------FGGVCEFSN--GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDM 209 (355)
T ss_dssp -------EEEEEEEET--TEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSE
T ss_pred -------CCceEEEEc--cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCE
Confidence 224556666 56666 5889999999998754 3445567789999999999999
Q ss_pred EEEEeCCCc-EEEEEccCCCcceEEeee-e-ccccEEEEEecCCCCEEEEEeCCccEEEEEccCccccceeee-------
Q psy710 223 LITATADDS-LHLWNFRQKRPEIVHSLK-F-QRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIIN------- 292 (591)
Q Consensus 223 l~~~~~d~~-i~~wd~~~~~~~~~~~~~-~-~~~~v~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~------- 292 (591)
|++++.|++ |++||++++ +++..+. + |...|.+++|+|++++|++++.|+.|++||+...........
T Consensus 210 l~s~s~d~~~v~iwd~~~~--~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~ 287 (355)
T 3vu4_A 210 VATCSQDGTIIRVFKTEDG--VLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMK 287 (355)
T ss_dssp EEEEETTCSEEEEEETTTC--CEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECC
T ss_pred EEEEeCCCCEEEEEECCCC--cEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeecc
Confidence 999999998 999999988 7888887 5 889999999999999999999999999999987543211000
Q ss_pred -----hhhhccccccCCCCCeEEEecCCCCCCeEEEEEcCCEEEEEecccc
Q psy710 293 -----WNKAIDVCMKTHPGPIIHLSDNPLDPSKLLLAYETGLVVHWDLKLK 338 (591)
Q Consensus 293 -----~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~iwd~~~~ 338 (591)
|..........+......++|++ ++++|++++.||.+++|++..+
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~-d~~~l~~~~~dg~~~~~~~~~~ 337 (355)
T 3vu4_A 288 YFQSEWSLCNFKLSVDKHVRGCKIAWIS-ESSLVVVWPHTRMIETFKVVFD 337 (355)
T ss_dssp CCCCSSCSEEEECCCCTTCCCCEEEESS-SSEEEEEETTTTEEEEEEEEEE
T ss_pred ccccccceeEEEeccCCCCCceEEEEeC-CCCEEEEEeCCCeEEEEEEEcC
Confidence 00000001111223346799999 9999999999999999998653
No 113
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=100.00 E-value=4.3e-31 Score=260.77 Aligned_cols=308 Identities=9% Similarity=0.093 Sum_probs=239.5
Q ss_pred CcEEEEEeCCCcEEEEcCC-CceeEeeccCCcceEEEEEeecCCEE-EEecCCCeEEEEeecccCceeeeEEEeeccceE
Q psy710 19 QKLLAIGTKTGSLRLLGRP-GVDAHVRHETDAAVIQMQFLTNEGAL-ITATADDSLHLWNFRQKRPEIVHSLKFQRERIT 96 (591)
Q Consensus 19 g~~la~g~~dg~i~lw~~~-~~~~~~~~~h~~~v~~l~~sp~~~~l-~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~ 96 (591)
+.++++++.|+.|++||+. +.....+..|. .+.+++|+|++++| ++++.|+.|++||+.+++ .+..+..+. .+.
T Consensus 2 ~~l~vs~~~d~~v~v~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~--~~~~~~~~~-~v~ 77 (391)
T 1l0q_A 2 TFAYIANSESDNISVIDVTSNKVTATIPVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTATNN--VIATVPAGS-SPQ 77 (391)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTE--EEEEEECSS-SEE
T ss_pred CEEEEEcCCCCEEEEEECCCCeEEEEeecCC-CcceEEECCCCCEEEEECCCCCeEEEEECCCCe--EEEEEECCC-Ccc
Confidence 3567888999999999988 55555666654 58999999999977 677789999999998873 566666554 899
Q ss_pred EEEeeCCceEEEEEe-CCCcEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEE
Q psy710 97 YIHLPLQSKWLYVGT-EKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAF 175 (591)
Q Consensus 97 ~~~~~~~~~~l~~~~-~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 175 (591)
+++|+|+++.|++++ .++.|++||+.+++....+. +...+.+++|
T Consensus 78 ~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~----------------------------------~~~~~~~~~~ 123 (391)
T 1l0q_A 78 GVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVK----------------------------------TGKSPLGLAL 123 (391)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE----------------------------------CSSSEEEEEE
T ss_pred ceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEe----------------------------------CCCCcceEEE
Confidence 999999999886555 57999999999877655443 2345789999
Q ss_pred CCCCCEE-EEEeCCCcEEEeCCCCeEEEEeccCCCcEEEEEEEcCCceE-EEEeCCCcEEEEEccCCCcceEEeeeeccc
Q psy710 176 DPIQKLL-AIGTKTGSLRLLGRPGVDAHVRHETDAAVIQMQFLTNEGAL-ITATADDSLHLWNFRQKRPEIVHSLKFQRE 253 (591)
Q Consensus 176 ~~~~~~l-~~~~~dg~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~ 253 (591)
+|+++.+ ++++.++.|++||+.+.+..........+..++|+|++++| ++++.++.|++||++++ +.+..+.. ..
T Consensus 124 s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~--~~~~~~~~-~~ 200 (391)
T 1l0q_A 124 SPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTN--SVIDTVKV-EA 200 (391)
T ss_dssp CTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTT--EEEEEEEC-SS
T ss_pred CCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCC--eEEEEEec-CC
Confidence 9999977 67788999999999888777665555678999999999987 56778899999999987 56666654 46
Q ss_pred cEEEEEecCCCCEEEEEe---CCccEEEEEccCccccceeeehhhhccccccCCCCCeEEEecCCCCCCeE-EEEEcCCE
Q psy710 254 RITYIHLPLQSKWLYVGT---EKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKL-LLAYETGL 329 (591)
Q Consensus 254 ~v~~~~~sp~~~~l~~~~---~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l-~~~~~dg~ 329 (591)
.+.+++|+|+++++++++ .++.|++||+.+++.. ..+..| ..+.+++|+| ++++| ++++.|+.
T Consensus 201 ~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~-----------~~~~~~-~~~~~~~~s~-dg~~l~~s~~~d~~ 267 (391)
T 1l0q_A 201 APSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKIT-----------ARIPVG-PDPAGIAVTP-DGKKVYVALSFXNT 267 (391)
T ss_dssp EEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEE-----------EEEECC-SSEEEEEECT-TSSEEEEEETTTTE
T ss_pred CccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEE-----------EEEecC-CCccEEEEcc-CCCEEEEEcCCCCE
Confidence 889999999999999888 6899999999987653 133333 3578999999 99877 56678999
Q ss_pred EEEEecccceEEEEec-cCCCe---------------eEEEEeecC----------CEEEEEecCCcEEEEecCCCCC
Q psy710 330 VVHWDLKLKRAEFRWQ-CSEPI---------------KSVCWHYEG----------KQFLCSHTDGTISTWAVRPLAK 381 (591)
Q Consensus 330 i~iwd~~~~~~~~~~~-~~~~v---------------~~~~~sp~g----------~~l~s~~~dg~i~vwd~~~~~~ 381 (591)
|++||+.++++...+. +..+. ....|+.+. ..+...+.|..+++||+. .+.
T Consensus 268 v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~-~g~ 344 (391)
T 1l0q_A 268 VSVIDTATNTITATMAVGKNPYASGQFIGSIPVQPVYPSADFKSNITSGYIFLSEPVQFTDLSKDATEWKWDFG-DGS 344 (391)
T ss_dssp EEEEETTTTEEEEEEECSSSEECCSSCEEECSSCCCCCBCCEEESCCSSEEETTCCEEEEECCBSCSEEEEECS-SSC
T ss_pred EEEEECCCCcEEEEEECCcCCCccceeeecccccccccccccccccccccccccceEEEEeCCCCceEEEEECC-CCc
Confidence 9999999998887765 22111 112233222 345666778899999997 443
No 114
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.1e-32 Score=271.66 Aligned_cols=295 Identities=9% Similarity=0.045 Sum_probs=225.8
Q ss_pred cceEEEEEeecCCEEEEecCCCeEEEEeecccCce-eeeEEE--------------------------------------
Q psy710 49 AAVIQMQFLTNEGALITATADDSLHLWNFRQKRPE-IVHSLK-------------------------------------- 89 (591)
Q Consensus 49 ~~v~~l~~sp~~~~l~s~~~d~~i~vw~~~~~~~~-~~~~~~-------------------------------------- 89 (591)
.++.+++|+|+|++|+++ .++.|++||+.+++.. .+..+.
T Consensus 5 ~p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (450)
T 2vdu_B 5 HPLQNLLTSRDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDS 83 (450)
T ss_dssp CCCCEEEECSSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC-----------------------------------
T ss_pred ccEEEEEecCCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCcc
Confidence 578999999999966665 5789999999887510 222222
Q ss_pred ----------------eeccceEEEEeeCCceEE-EEEeCCCcEEEEEee--eeeeeceecccccccccCCCCCCCceec
Q psy710 90 ----------------FQRERITYIHLPLQSKWL-YVGTEKGNIHVVNIE--SFTLSGYIINWNKAIDVCMKTHPGPIIH 150 (591)
Q Consensus 90 ----------------~~~~~v~~~~~~~~~~~l-~~~~~d~~i~vwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (591)
.|...|.+++|+|++++| ++++.|+.|++||+. +++....+..
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~------------------ 145 (450)
T 2vdu_B 84 IKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKR------------------ 145 (450)
T ss_dssp ----------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEE------------------
T ss_pred ccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeec------------------
Confidence 233369999999999996 888899999999998 6654444331
Q ss_pred cCCCCcCcceeeeccCCCCceEEEECCCCCEEEEEeCCCcEEEeCCCCeEEE-----EeccCCCcEEEEEEEcC---Cce
Q psy710 151 LSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGVDAH-----VRHETDAAVIQMQFLTN---EGA 222 (591)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-----~~~~~~~~v~~~~~~~~---~~~ 222 (591)
..+...|.+++|+|++++|++++.+|.+++|++...... ....+...|.+++|+|+ +++
T Consensus 146 -------------~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~ 212 (450)
T 2vdu_B 146 -------------FCFSKRPNAISIAEDDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQF 212 (450)
T ss_dssp -------------EECSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEE
T ss_pred -------------ccCCCCceEEEEcCCCCEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcE
Confidence 245677899999999999999999999999998765432 22345669999999999 999
Q ss_pred EEEEeCCCcEEEEEccCCCcceEEe-eeeccccEEEEEecCCCCEEEEEeCCccEEEEEccCccccceeeehhhhccccc
Q psy710 223 LITATADDSLHLWNFRQKRPEIVHS-LKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCM 301 (591)
Q Consensus 223 l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~ 301 (591)
|++++.|+.|++||++++ ..+.. +.+|...|.+++|+ ++++|++++.|+.|++||+.+++................
T Consensus 213 l~s~~~d~~i~vwd~~~~--~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~ 289 (450)
T 2vdu_B 213 IITSDRDEHIKISHYPQC--FIVDKWLFGHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLN 289 (450)
T ss_dssp EEEEETTSCEEEEEESCT--TCEEEECCCCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCC
T ss_pred EEEEcCCCcEEEEECCCC--ceeeeeecCCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhh
Confidence 999999999999999987 55655 66899999999999 999999999999999999998875422111000000000
Q ss_pred --------------cCCCCCeEEEecCCCCCCeEEEEE-cCCEEEEEec--ccc---eEEEEeccCCCeeEEEEeecCCE
Q psy710 302 --------------KTHPGPIIHLSDNPLDPSKLLLAY-ETGLVVHWDL--KLK---RAEFRWQCSEPIKSVCWHYEGKQ 361 (591)
Q Consensus 302 --------------~~~~~~v~~~~~sp~~~~~l~~~~-~dg~i~iwd~--~~~---~~~~~~~~~~~v~~~~~sp~g~~ 361 (591)
......|.+++|+| ++++|++++ .|+.|++|++ ..+ +....+.....|.+++|+|++.+
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~v~~i~~~~-~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~ 368 (450)
T 2vdu_B 290 DQHLAPPRFQNENNDIIEFAVSKIIKSK-NLPFVAFFVEATKCIIILEMSEKQKGDLALKQIITFPYNVISLSAHNDEFQ 368 (450)
T ss_dssp TTSBC----------CBCCCEEEEEECS-SSSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECSSCEEEEEEETTEEE
T ss_pred hcccccccccccccccceEEEEEEEEeC-CCCEEEEEECCCCeEEEEEeccCCCCceeeccEeccCCceEEEEecCCcEE
Confidence 12345799999999 999999998 8999999999 555 55566654589999999996543
Q ss_pred EEEEec------CCcEEEEecCCC
Q psy710 362 FLCSHT------DGTISTWAVRPL 379 (591)
Q Consensus 362 l~s~~~------dg~i~vwd~~~~ 379 (591)
+++++. +..|.+|.+...
T Consensus 369 v~~~~~~~~~~~~~~i~v~~~~~~ 392 (450)
T 2vdu_B 369 VTLDNKESSGVQKNFAKFIEYNLN 392 (450)
T ss_dssp EEECCTTCCSSCCCSEEEEEEETT
T ss_pred EEEecccCCCCCCcceEEEEEEcC
Confidence 333333 556899988743
No 115
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-33 Score=301.62 Aligned_cols=253 Identities=9% Similarity=0.103 Sum_probs=212.9
Q ss_pred cccCCCCCCcEEEeCCCCcEEEEEeCCCcEEEEcCC---CceeEeeccCCcceEEEEEeec--CCEEEEecCCCeEEEEe
Q psy710 2 FRHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRP---GVDAHVRHETDAAVIQMQFLTN--EGALITATADDSLHLWN 76 (591)
Q Consensus 2 ~~~gh~~~v~~~~~spdg~~la~g~~dg~i~lw~~~---~~~~~~~~~h~~~v~~l~~sp~--~~~l~s~~~d~~i~vw~ 76 (591)
+..||.+.|++++|+|+|++||+|+.||.|++||+. ......+.+|.++|.+++|+|+ +++|++++.||.|++||
T Consensus 4 ~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd 83 (753)
T 3jro_A 4 IANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWK 83 (753)
T ss_dssp ----CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEE
T ss_pred ecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEE
Confidence 467999999999999999999999999999999985 3456678899999999999998 89999999999999999
Q ss_pred ecccCceeeeEEEeeccceEEEEeeCC--ceEEEEEeCCCcEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCC
Q psy710 77 FRQKRPEIVHSLKFQRERITYIHLPLQ--SKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDN 154 (591)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (591)
+.+++...+..+..|...|.+++|+|+ ++.+++++.||.|++||+.++......
T Consensus 84 ~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~------------------------ 139 (753)
T 3jro_A 84 EENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPI------------------------ 139 (753)
T ss_dssp EETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCE------------------------
T ss_pred CCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCccee------------------------
Confidence 998754577888889999999999999 999999999999999999875321111
Q ss_pred CcCcceeeeccCCCCceEEEECC-------------CCCEEEEEeCCCcEEEeCCCCe----EEE-EeccCCCcEEEEEE
Q psy710 155 PLDPSKTFRHGFPYQPTAIAFDP-------------IQKLLAIGTKTGSLRLLGRPGV----DAH-VRHETDAAVIQMQF 216 (591)
Q Consensus 155 ~~~~~~~~~~~~~~~v~~~~~~~-------------~~~~l~~~~~dg~i~i~d~~~~----~~~-~~~~~~~~v~~~~~ 216 (591)
...+|...|.+++|+| +++++++|+.||.|++||+... ... ....|...|.+++|
T Consensus 140 -------~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~ 212 (753)
T 3jro_A 140 -------IIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAW 212 (753)
T ss_dssp -------EEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEE
T ss_pred -------EeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEe
Confidence 1136778899999999 5899999999999999997654 222 33456779999999
Q ss_pred EcC---CceEEEEeCCCcEEEEEccCCCcc---eEEeeeeccccEEEEEecCCCCEEEEEeCCccEEEEEccCcc
Q psy710 217 LTN---EGALITATADDSLHLWNFRQKRPE---IVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFT 285 (591)
Q Consensus 217 ~~~---~~~l~~~~~d~~i~~wd~~~~~~~---~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~ 285 (591)
+|+ +++|++++.||.|++||++++... .......|...|.+++|+|+++++++++.||.|++|++....
T Consensus 213 sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~~~ 287 (753)
T 3jro_A 213 SPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEG 287 (753)
T ss_dssp CCCCSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCSSS
T ss_pred ccCCCCCCEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCCCC
Confidence 999 899999999999999999876322 223334577889999999999999999999999999998643
No 116
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.2e-33 Score=296.43 Aligned_cols=258 Identities=10% Similarity=0.126 Sum_probs=216.5
Q ss_pred EeeccCCcceEEEEEeecCCEEEEecCCCeEEEEeecccCceeeeEEEeeccceEEEEeeCC--ceEEEEEeCCCcEEEE
Q psy710 42 HVRHETDAAVIQMQFLTNEGALITATADDSLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQ--SKWLYVGTEKGNIHVV 119 (591)
Q Consensus 42 ~~~~~h~~~v~~l~~sp~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~vw 119 (591)
..+.+|.+.|++++|+|++++|++++.||+|++||+..+.......+.+|.+.|.+++|+|+ ++.|++++.||.|++|
T Consensus 3 ~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vw 82 (753)
T 3jro_A 3 VIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIW 82 (753)
T ss_dssp -----CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEE
T ss_pred eecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEE
Confidence 46789999999999999999999999999999999986554678889999999999999988 9999999999999999
Q ss_pred Eeeeeee--eceecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCC--CCEEEEEeCCCcEEEeC
Q psy710 120 NIESFTL--SGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPI--QKLLAIGTKTGSLRLLG 195 (591)
Q Consensus 120 d~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~i~d 195 (591)
|+.+++. ...+ .+|...|.+++|+|+ ++.+++|+.||.|++||
T Consensus 83 d~~~~~~~~~~~~---------------------------------~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwd 129 (753)
T 3jro_A 83 KEENGRWSQIAVH---------------------------------AVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVE 129 (753)
T ss_dssp EEETTEEEEEEEE---------------------------------CCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEE
T ss_pred ECCCCcccccccc---------------------------------cCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEE
Confidence 9998652 2222 357788999999999 99999999999999999
Q ss_pred CCCe---EEEEeccCCCcEEEEEEEc-------------CCceEEEEeCCCcEEEEEccCCCc--ceEEeeeeccccEEE
Q psy710 196 RPGV---DAHVRHETDAAVIQMQFLT-------------NEGALITATADDSLHLWNFRQKRP--EIVHSLKFQRERITY 257 (591)
Q Consensus 196 ~~~~---~~~~~~~~~~~v~~~~~~~-------------~~~~l~~~~~d~~i~~wd~~~~~~--~~~~~~~~~~~~v~~ 257 (591)
+... .......+...|.+++|+| +++.|++++.||.|++||+++... .....+.+|...|.+
T Consensus 130 l~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~ 209 (753)
T 3jro_A 130 FKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRD 209 (753)
T ss_dssp CCSSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEE
T ss_pred eecCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEE
Confidence 8765 2334455677999999999 589999999999999999987642 355677889999999
Q ss_pred EEecCC---CCEEEEEeCCccEEEEEccCccccceeeehhhhccccccCCCCCeEEEecCCCCCCeEEEEEcCCEEEEEe
Q psy710 258 IHLPLQ---SKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKLLLAYETGLVVHWD 334 (591)
Q Consensus 258 ~~~sp~---~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~iwd 334 (591)
++|+|+ ++++++++.||.|++||+.+++... .........|...|++++|+| ++++|++++.||.|++||
T Consensus 210 l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~------~~~~~~~~~~~~~v~~l~~sp-dg~~l~s~s~Dg~I~vwd 282 (753)
T 3jro_A 210 VAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPW------KKTLLKEEKFPDVLWRASWSL-SGNVLALSGGDNKVTLWK 282 (753)
T ss_dssp EEECCCCSSSEEEEEEESSSCEEEEEESSSSSCC------BCCBSSSSCCSSCCCCEEECT-TTCCEEEECSSSCEECCB
T ss_pred EEeccCCCCCCEEEEEecCCEEEEecCCCCCCcc------eeEEeccCCCCCceEEEEEcC-CCCEEEEEcCCCEEEEEe
Confidence 999999 9999999999999999998864210 001224456889999999999 999999999999999999
Q ss_pred cccce
Q psy710 335 LKLKR 339 (591)
Q Consensus 335 ~~~~~ 339 (591)
+..+.
T Consensus 283 ~~~~~ 287 (753)
T 3jro_A 283 ENLEG 287 (753)
T ss_dssp CCSSS
T ss_pred cCCCC
Confidence 98643
No 117
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=5.2e-32 Score=270.17 Aligned_cols=304 Identities=14% Similarity=0.217 Sum_probs=235.6
Q ss_pred CCCCcEEEeCCCC----------cEEEEEeC----CCcEEEEcCC----------------------------CceeEee
Q psy710 7 PYQPTAIAFDPIQ----------KLLAIGTK----TGSLRLLGRP----------------------------GVDAHVR 44 (591)
Q Consensus 7 ~~~v~~~~~spdg----------~~la~g~~----dg~i~lw~~~----------------------------~~~~~~~ 44 (591)
.-+..++.|.|+. .++++|+. ...|.++++. .......
T Consensus 45 ~wp~l~~~~~p~~~~~~~~~~~~~~~~~GT~t~~~~n~i~i~~~~lp~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 124 (430)
T 2xyi_A 45 EWPSLTAQWLPDVTKQDGKDYSVHRLILGTHTSDEQNHLLIASVQLPSEDAQFDGSHYDNEKGEFGGFGSVCGKIEIEIK 124 (430)
T ss_dssp SSCCSCEEECSCCEECTTCSCEEEEEEEECCCSSSCEEEEEEEEEEC--------------------------CEEEEEE
T ss_pred CCCceEEEECcccccccCCCcceEEEEEEEcCCCCCCEEEEEEEECCCCccccccccccccccccccccCCCCceEEEEE
Confidence 3467889999975 56888865 3457776432 0112445
Q ss_pred ccCCcceEEEEEeec-CCEEEEecCCCeEEEEeecc--------cCceeeeEEEeeccceEEEEeeCCce-EEEEEeCCC
Q psy710 45 HETDAAVIQMQFLTN-EGALITATADDSLHLWNFRQ--------KRPEIVHSLKFQRERITYIHLPLQSK-WLYVGTEKG 114 (591)
Q Consensus 45 ~~h~~~v~~l~~sp~-~~~l~s~~~d~~i~vw~~~~--------~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~ 114 (591)
..|.+.|++++|+|+ +++|++++.||.|++|++.. +.......+.+|...|.+++|+|+++ +|++++.||
T Consensus 125 ~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg 204 (430)
T 2xyi_A 125 INHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDH 204 (430)
T ss_dssp EEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTTS
T ss_pred EcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCC
Confidence 689999999999997 67899999999999999986 22346778889999999999999998 999999999
Q ss_pred cEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECC-CCCEEEEEeCCCcEEE
Q psy710 115 NIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDP-IQKLLAIGTKTGSLRL 193 (591)
Q Consensus 115 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~i 193 (591)
.|++|++.++....... .....+ .+|...|.+++|+| ++.+|++++.+|.|++
T Consensus 205 ~i~vwd~~~~~~~~~~~-------------------------~~~~~~-~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i 258 (430)
T 2xyi_A 205 TICLWDINATPKEHRVI-------------------------DAKNIF-TGHTAVVEDVAWHLLHESLFGSVADDQKLMI 258 (430)
T ss_dssp CEEEEETTSCCBGGGEE-------------------------ECSEEE-CCCSSCEEEEEECSSCTTEEEEEETTSEEEE
T ss_pred eEEEEeCCCCCCCCcee-------------------------ccceee-cCCCCCEeeeEEeCCCCCEEEEEeCCCeEEE
Confidence 99999998743211100 001111 36778899999999 6789999999999999
Q ss_pred eCCCCe----EEEEeccCCCcEEEEEEEcCCc-eEEEEeCCCcEEEEEccCCCcceEEeeeeccccEEEEEecCCCC-EE
Q psy710 194 LGRPGV----DAHVRHETDAAVIQMQFLTNEG-ALITATADDSLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQSK-WL 267 (591)
Q Consensus 194 ~d~~~~----~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~sp~~~-~l 267 (591)
||+... .......+...|++++|+|+++ .|++++.||.|++||++... ..+..+..|...|.+++|+|+++ ++
T Consensus 259 ~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~-~~~~~~~~h~~~v~~i~~sp~~~~~l 337 (430)
T 2xyi_A 259 WDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLK-LKLHSFESHKDEIFQVQWSPHNETIL 337 (430)
T ss_dssp EETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTT-SCSEEEECCSSCEEEEEECSSCTTEE
T ss_pred EECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCC-CCeEEeecCCCCEEEEEECCCCCCEE
Confidence 999765 2233345667999999999997 68899999999999999743 56778888999999999999985 68
Q ss_pred EEEeCCccEEEEEccCccccceee---ehhhhccccccCCCCCeEEEecCCCCCC-eEEEEEcCCEEEEEecccc
Q psy710 268 YVGTEKGNIHVVNIESFTLSGYII---NWNKAIDVCMKTHPGPIIHLSDNPLDPS-KLLLAYETGLVVHWDLKLK 338 (591)
Q Consensus 268 ~~~~~dg~i~i~d~~~~~~~~~~~---~~~~~~~~~~~~~~~~v~~~~~sp~~~~-~l~~~~~dg~i~iwd~~~~ 338 (591)
++++.|+.|++||+.......... ...........+|...|.+++|+| ++. +|++++.|+.|++|++...
T Consensus 338 ~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p-~~~~~l~s~s~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 338 ASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNP-NEPWIICSVSEDNIMQVWQMAEN 411 (430)
T ss_dssp EEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECS-SSTTEEEEEETTSEEEEEEECHH
T ss_pred EEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECC-CCCCEEEEEECCCCEEEeEcccc
Confidence 999999999999998732210000 000012346678999999999999 888 8999999999999999764
No 118
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.8e-32 Score=270.48 Aligned_cols=285 Identities=11% Similarity=0.110 Sum_probs=220.6
Q ss_pred CCCCcEEEeCCCCcEEEEEeCCCcEEEEcCC-Cc---eeEeec-------------------------------------
Q psy710 7 PYQPTAIAFDPIQKLLAIGTKTGSLRLLGRP-GV---DAHVRH------------------------------------- 45 (591)
Q Consensus 7 ~~~v~~~~~spdg~~la~g~~dg~i~lw~~~-~~---~~~~~~------------------------------------- 45 (591)
..++.+++|+|||++|+++ .++.|++||+. +. .+..+.
T Consensus 4 ~~p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (450)
T 2vdu_B 4 IHPLQNLLTSRDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGD 82 (450)
T ss_dssp ECCCCEEEECSSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC----------------------------------
T ss_pred cccEEEEEecCCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCc
Confidence 4578999999999977665 57899999976 44 333333
Q ss_pred -----------------cCCcceEEEEEeecCCEE-EEecCCCeEEEEeec--ccCceeeeEEE--eeccceEEEEeeCC
Q psy710 46 -----------------ETDAAVIQMQFLTNEGAL-ITATADDSLHLWNFR--QKRPEIVHSLK--FQRERITYIHLPLQ 103 (591)
Q Consensus 46 -----------------~h~~~v~~l~~sp~~~~l-~s~~~d~~i~vw~~~--~~~~~~~~~~~--~~~~~v~~~~~~~~ 103 (591)
.|.+.|.+++|+|++++| ++++.|+.|++||+. +++ .+..+. .|...|.+++|+|+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~--~~~~~~~~~~~~~v~~~~~sp~ 160 (450)
T 2vdu_B 83 SIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKN--VLKLRKRFCFSKRPNAISIAED 160 (450)
T ss_dssp -----------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSS--CEEEEEEEECSSCEEEEEECTT
T ss_pred cccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCc--eeeeeecccCCCCceEEEEcCC
Confidence 234479999999999996 899999999999999 664 455555 56688999999999
Q ss_pred ceEEEEEeCCCcEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCC---CC
Q psy710 104 SKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPI---QK 180 (591)
Q Consensus 104 ~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~ 180 (591)
+++|++++.++.|++|++.+++.... ....+ .+|...|.+++|+|+ ++
T Consensus 161 ~~~l~~~~~~g~v~~~~~~~~~~~~~----------------------------~~~~~-~~h~~~v~~~~~sp~~~~~~ 211 (450)
T 2vdu_B 161 DTTVIIADKFGDVYSIDINSIPEEKF----------------------------TQEPI-LGHVSMLTDVHLIKDSDGHQ 211 (450)
T ss_dssp SSEEEEEETTSEEEEEETTSCCCSSC----------------------------CCCCS-EECSSCEEEEEEEECTTSCE
T ss_pred CCEEEEEeCCCcEEEEecCCcccccc----------------------------cceee-ecccCceEEEEEcCCCCCCc
Confidence 99999999999999999987553220 00011 357788999999999 99
Q ss_pred EEEEEeCCCcEEEeCCCCeEEEE--eccCCCcEEEEEEEcCCceEEEEeCCCcEEEEEccCCCcceEEeeeec-------
Q psy710 181 LLAIGTKTGSLRLLGRPGVDAHV--RHETDAAVIQMQFLTNEGALITATADDSLHLWNFRQKRPEIVHSLKFQ------- 251 (591)
Q Consensus 181 ~l~~~~~dg~i~i~d~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~------- 251 (591)
+|++++.|+.|++||+...+... ...+...|.+++|+ ++++|++++.|+.|++||++++ +.+..+..+
T Consensus 212 ~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~--~~~~~~~~~~~~~~~~ 288 (450)
T 2vdu_B 212 FIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTG--KNLSTFDYNSLIKPYL 288 (450)
T ss_dssp EEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTC--CEEEEEECHHHHGGGC
T ss_pred EEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCC--cEeeeecchhhhhhhh
Confidence 99999999999999988765443 33567799999999 9999999999999999999988 566666532
Q ss_pred ------------------cccEEEEEecCCCCEEEEEe-CCccEEEEEc--cCccccceeeehhhhccccccCCCCCeEE
Q psy710 252 ------------------RERITYIHLPLQSKWLYVGT-EKGNIHVVNI--ESFTLSGYIINWNKAIDVCMKTHPGPIIH 310 (591)
Q Consensus 252 ------------------~~~v~~~~~sp~~~~l~~~~-~dg~i~i~d~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 310 (591)
...+..++|+|+++++++++ .++.|++|++ ....... ....+..| ..|.+
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~~~l~--------~~~~~~~~-~~v~~ 359 (450)
T 2vdu_B 289 NDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQKGDLA--------LKQIITFP-YNVIS 359 (450)
T ss_dssp CTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEECSSSTTCEE--------EEEEEECS-SCEEE
T ss_pred hhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccCCCCcee--------eccEeccC-CceEE
Confidence 34689999999999999998 8999999999 4431110 02244556 78999
Q ss_pred EecCCCCCCeEEEEEc------CCEEEEEecc
Q psy710 311 LSDNPLDPSKLLLAYE------TGLVVHWDLK 336 (591)
Q Consensus 311 ~~~sp~~~~~l~~~~~------dg~i~iwd~~ 336 (591)
++|+| ++.++++++. +..|.+|.+.
T Consensus 360 ~~~~~-~~~~v~~~~~~~~~~~~~~i~v~~~~ 390 (450)
T 2vdu_B 360 LSAHN-DEFQVTLDNKESSGVQKNFAKFIEYN 390 (450)
T ss_dssp EEEET-TEEEEEECCTTCCSSCCCSEEEEEEE
T ss_pred EEecC-CcEEEEEecccCCCCCCcceEEEEEE
Confidence 99999 6433333332 4457787664
No 119
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=1.6e-31 Score=266.63 Aligned_cols=295 Identities=13% Similarity=0.192 Sum_probs=227.9
Q ss_pred cceEEEEEeecC----------CEEEEecC----CCeEEEEeecc------------------------cCc-eeeeEEE
Q psy710 49 AAVIQMQFLTNE----------GALITATA----DDSLHLWNFRQ------------------------KRP-EIVHSLK 89 (591)
Q Consensus 49 ~~v~~l~~sp~~----------~~l~s~~~----d~~i~vw~~~~------------------------~~~-~~~~~~~ 89 (591)
-+..++.|.|+. .+++.|+. .+.|.+.++.- ..+ .......
T Consensus 46 wp~l~~~~~p~~~~~~~~~~~~~~~~~GT~t~~~~n~i~i~~~~lp~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 125 (430)
T 2xyi_A 46 WPSLTAQWLPDVTKQDGKDYSVHRLILGTHTSDEQNHLLIASVQLPSEDAQFDGSHYDNEKGEFGGFGSVCGKIEIEIKI 125 (430)
T ss_dssp SCCSCEEECSCCEECTTCSCEEEEEEEECCCSSSCEEEEEEEEEEC--------------------------CEEEEEEE
T ss_pred CCceEEEECcccccccCCCcceEEEEEEEcCCCCCCEEEEEEEECCCCccccccccccccccccccccCCCCceEEEEEE
Confidence 466778888764 35666553 45677776540 001 1234556
Q ss_pred eeccceEEEEeeCC-ceEEEEEeCCCcEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCcceeeeccCCC
Q psy710 90 FQRERITYIHLPLQ-SKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPY 168 (591)
Q Consensus 90 ~~~~~v~~~~~~~~-~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (591)
.|.+.|++++|+|+ +++|++++.+|.|++|++.+...... ..........+ .+|..
T Consensus 126 ~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~----------------------~~~~~~~~~~~-~~h~~ 182 (430)
T 2xyi_A 126 NHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPE----------------------PSGECQPDLRL-RGHQK 182 (430)
T ss_dssp EESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCC----------------------TTCCCCCSEEE-ECCSS
T ss_pred cCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccC----------------------ccccCCCcEEe-cCCCC
Confidence 79999999999997 78999999999999999976211000 00011222223 36788
Q ss_pred CceEEEECCCCC-EEEEEeCCCcEEEeCCCCeE--------EEEeccCCCcEEEEEEEc-CCceEEEEeCCCcEEEEEcc
Q psy710 169 QPTAIAFDPIQK-LLAIGTKTGSLRLLGRPGVD--------AHVRHETDAAVIQMQFLT-NEGALITATADDSLHLWNFR 238 (591)
Q Consensus 169 ~v~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~--------~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~wd~~ 238 (591)
.+.+++|+|++. +|++|+.||.|++|++.... ......+...|.+++|+| ++..|++++.|+.|++||++
T Consensus 183 ~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~ 262 (430)
T 2xyi_A 183 EGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTR 262 (430)
T ss_dssp CCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETT
T ss_pred CeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECC
Confidence 899999999988 99999999999999997621 123335667999999999 67789999999999999998
Q ss_pred CCC-cceEEeeeeccccEEEEEecCCCC-EEEEEeCCccEEEEEccCccccceeeehhhhccccccCCCCCeEEEecCCC
Q psy710 239 QKR-PEIVHSLKFQRERITYIHLPLQSK-WLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPL 316 (591)
Q Consensus 239 ~~~-~~~~~~~~~~~~~v~~~~~sp~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~ 316 (591)
+.. ...+..+..|...|++++|+|+++ ++++|+.||.|++||+++.... ...+..|...|.+++|+|
T Consensus 263 ~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~----------~~~~~~h~~~v~~i~~sp- 331 (430)
T 2xyi_A 263 NNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK----------LHSFESHKDEIFQVQWSP- 331 (430)
T ss_dssp CSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSC----------SEEEECCSSCEEEEEECS-
T ss_pred CCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCC----------eEEeecCCCCEEEEEECC-
Confidence 752 245666778889999999999987 6889999999999999874331 335678999999999999
Q ss_pred CCC-eEEEEEcCCEEEEEeccc--------------ceEEEEe-ccCCCeeEEEEeecCC-EEEEEecCCcEEEEecC
Q psy710 317 DPS-KLLLAYETGLVVHWDLKL--------------KRAEFRW-QCSEPIKSVCWHYEGK-QFLCSHTDGTISTWAVR 377 (591)
Q Consensus 317 ~~~-~l~~~~~dg~i~iwd~~~--------------~~~~~~~-~~~~~v~~~~~sp~g~-~l~s~~~dg~i~vwd~~ 377 (591)
+++ +|++++.|+.|++||+.. .+++... .|...|.+++|+|+++ +|++++.||.|++|++.
T Consensus 332 ~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~ 409 (430)
T 2xyi_A 332 HNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMA 409 (430)
T ss_dssp SCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEEC
T ss_pred CCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEcc
Confidence 775 689999999999999987 2444444 3788999999999999 99999999999999998
No 120
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=100.00 E-value=1.2e-30 Score=257.55 Aligned_cols=275 Identities=10% Similarity=0.112 Sum_probs=228.7
Q ss_pred CEEEEecCCCeEEEEeecccCceeeeEEEeeccceEEEEeeCCceEE-EEEeCCCcEEEEEeeeeeeeceeccccccccc
Q psy710 61 GALITATADDSLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWL-YVGTEKGNIHVVNIESFTLSGYIINWNKAIDV 139 (591)
Q Consensus 61 ~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~ 139 (591)
..+++++.|+.|++||+.++ +.+..+..| ..+.+++|+|+++.+ ++++.|+.|++||+.+++....+.
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~--~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~-------- 71 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSN--KVTATIPVG-SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVP-------- 71 (391)
T ss_dssp EEEEEETTTTEEEEEETTTT--EEEEEEECS-SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEE--------
T ss_pred EEEEEcCCCCEEEEEECCCC--eEEEEeecC-CCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEE--------
Confidence 35778899999999999987 466777766 458999999999977 566689999999999887665544
Q ss_pred CCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCCCCEEEEEe-CCCcEEEeCCCCeEEEEeccCCCcEEEEEEEc
Q psy710 140 CMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGT-KTGSLRLLGRPGVDAHVRHETDAAVIQMQFLT 218 (591)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~v~~~~~~~ 218 (591)
+...+.+++|+|+++.+++++ .++.|++||+.+.+..........+.+++|+|
T Consensus 72 --------------------------~~~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~ 125 (391)
T 1l0q_A 72 --------------------------AGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLALSP 125 (391)
T ss_dssp --------------------------CSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECT
T ss_pred --------------------------CCCCccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCCCCcceEEECC
Confidence 223689999999999876554 67999999999888776666666899999999
Q ss_pred CCceE-EEEeCCCcEEEEEccCCCcceEEeeeeccccEEEEEecCCCCEE-EEEeCCccEEEEEccCccccceeeehhhh
Q psy710 219 NEGAL-ITATADDSLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWL-YVGTEKGNIHVVNIESFTLSGYIINWNKA 296 (591)
Q Consensus 219 ~~~~l-~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l-~~~~~dg~i~i~d~~~~~~~~~~~~~~~~ 296 (591)
+++.| ++++.++.|++||+.++ +.+..+..+ ..+..++|+|+++++ ++++.++.|++||+.+++..
T Consensus 126 dg~~l~~~~~~~~~v~~~d~~~~--~~~~~~~~~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~--------- 193 (391)
T 1l0q_A 126 DGKKLYVTNNGDKTVSVINTVTK--AVINTVSVG-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVI--------- 193 (391)
T ss_dssp TSSEEEEEETTTTEEEEEETTTT--EEEEEEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEE---------
T ss_pred CCCEEEEEeCCCCEEEEEECCCC--cEEEEEecC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEE---------
Confidence 99977 67788999999999987 677777665 567999999999987 56778899999999987653
Q ss_pred ccccccCCCCCeEEEecCCCCCCeEEEEE---cCCEEEEEecccceEEEEeccCCCeeEEEEeecCCEE-EEEecCCcEE
Q psy710 297 IDVCMKTHPGPIIHLSDNPLDPSKLLLAY---ETGLVVHWDLKLKRAEFRWQCSEPIKSVCWHYEGKQF-LCSHTDGTIS 372 (591)
Q Consensus 297 ~~~~~~~~~~~v~~~~~sp~~~~~l~~~~---~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~g~~l-~s~~~dg~i~ 372 (591)
....+...+.+++|+| ++++|++++ .++.|++||+.+++....+.....+.+++|+|++++| ++++.|+.|+
T Consensus 194 ---~~~~~~~~~~~~~~~~-~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~s~~~d~~v~ 269 (391)
T 1l0q_A 194 ---DTVKVEAAPSGIAVNP-EGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGPDPAGIAVTPDGKKVYVALSFXNTVS 269 (391)
T ss_dssp ---EEEECSSEEEEEEECT-TSSEEEEEEECSSCCEEEEEETTTTEEEEEEECCSSEEEEEECTTSSEEEEEETTTTEEE
T ss_pred ---EEEecCCCccceEECC-CCCEEEEEecCcCCCcEEEEECCCCeEEEEEecCCCccEEEEccCCCEEEEEcCCCCEEE
Confidence 1223456789999999 999999887 6899999999999988888867778999999999987 5668899999
Q ss_pred EEecCCCCCceeeeccc
Q psy710 373 TWAVRPLAKPVSVNQPH 389 (591)
Q Consensus 373 vwd~~~~~~~~~~~~~~ 389 (591)
+||+. +++.+..+..+
T Consensus 270 v~d~~-~~~~~~~~~~~ 285 (391)
T 1l0q_A 270 VIDTA-TNTITATMAVG 285 (391)
T ss_dssp EEETT-TTEEEEEEECS
T ss_pred EEECC-CCcEEEEEECC
Confidence 99999 78888877776
No 121
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3e-32 Score=263.51 Aligned_cols=278 Identities=6% Similarity=0.050 Sum_probs=213.2
Q ss_pred EEeecCCEEEEecCCCeEEEEeecccCceeeeEEEeeccceEEEEeeCCceEEEEEeCCCcEEEEEeeeeeeeceecccc
Q psy710 55 QFLTNEGALITATADDSLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWN 134 (591)
Q Consensus 55 ~~sp~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~ 134 (591)
.+.+++++|++|+.|++|++||+.+++ .+..+. ...|.++.|+|+ +++++.|+.|++|+.........
T Consensus 43 ~~~~d~~~l~sg~~Dg~v~iwd~~~~~--~~~~~~--~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~----- 110 (343)
T 3lrv_A 43 SMYYDKWVCMCRCEDGALHFTQLKDSK--TITTIT--TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILD----- 110 (343)
T ss_dssp SSSEEEEEEEEEEETTEEEEEEESSSS--CEEEEE--EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEE-----
T ss_pred hhcCCCCEEEEECCCCcEEEEECCCCc--EEEEEe--cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEee-----
Confidence 445678899999999999999999885 455554 466888889988 99999999999998875321111
Q ss_pred cccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECC--CCCEEEEEeCCCcEEEeCCCCeEEEEec--cCCCc
Q psy710 135 KAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDP--IQKLLAIGTKTGSLRLLGRPGVDAHVRH--ETDAA 210 (591)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~--~~~~~ 210 (591)
....+.......+|...|.+++|+| +++++++++.||.|++||+.+.+..... .+...
T Consensus 111 ------------------~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~ 172 (343)
T 3lrv_A 111 ------------------SKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVE 172 (343)
T ss_dssp ------------------TTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCC
T ss_pred ------------------cCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCc
Confidence 1111223333346678899999999 9999999999999999999888775433 33457
Q ss_pred EEEEEEEcCCceEEEEeCCCcEEEEEccCCCcceE-Eeeee-ccccEEEEEecCCCCEEEEEeCCccEEEEEccCccccc
Q psy710 211 VIQMQFLTNEGALITATADDSLHLWNFRQKRPEIV-HSLKF-QRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSG 288 (591)
Q Consensus 211 v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~-~~~~~-~~~~v~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~ 288 (591)
+.+++|+|++++|++|+.|+.|++||++++ +.+ ..+.. |..+|.+++|+|++.+|++++. +.|++||+++.+...
T Consensus 173 i~~~~~~pdg~~lasg~~dg~i~iwd~~~~--~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~~-~~v~iwd~~~~~~~~ 249 (343)
T 3lrv_A 173 YSSGVLHKDSLLLALYSPDGILDVYNLSSP--DQASSRFPVDEEAKIKEVKFADNGYWMVVECD-QTVVCFDLRKDVGTL 249 (343)
T ss_dssp CCEEEECTTSCEEEEECTTSCEEEEESSCT--TSCCEECCCCTTSCEEEEEECTTSSEEEEEES-SBEEEEETTSSTTCB
T ss_pred eEEEEECCCCCEEEEEcCCCEEEEEECCCC--CCCccEEeccCCCCEEEEEEeCCCCEEEEEeC-CeEEEEEcCCCCcce
Confidence 999999999999999999999999999988 444 66777 8999999999999999999994 599999999876521
Q ss_pred eeeehhhhccccccCCCCCe--EEEecCCCCCCeEEEEEc-CCEEEEEecccceEEEEeccCCCeeEEEEee---cCCEE
Q psy710 289 YIINWNKAIDVCMKTHPGPI--IHLSDNPLDPSKLLLAYE-TGLVVHWDLKLKRAEFRWQCSEPIKSVCWHY---EGKQF 362 (591)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~v--~~~~~sp~~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp---~g~~l 362 (591)
. ...+..|...+ .+++|+| ++++|++++. |+.|++|++......... .++..++|++ +.+.+
T Consensus 250 ~--------~~~~~~~~~~~~~~~~~~~~-~g~~l~~~s~~d~~i~v~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l 317 (343)
T 3lrv_A 250 A--------YPTYTIPEFKTGTVTYDIDD-SGKNMIAYSNESNSLTIYKFDKKTKNWTK---DEESALCLQSDTADFTDM 317 (343)
T ss_dssp S--------SCCCBC-----CCEEEEECT-TSSEEEEEETTTTEEEEEEECTTTCSEEE---EEEEECCC----CCCCEE
T ss_pred e--------ecccccccccccceEEEECC-CCCEEEEecCCCCcEEEEEEcccccceEe---cCceeEecCcccccccee
Confidence 0 01112233333 4699999 9999999998 999999999654322221 5677888988 88999
Q ss_pred EEEecCCcEEEEecC
Q psy710 363 LCSHTDGTISTWAVR 377 (591)
Q Consensus 363 ~s~~~dg~i~vwd~~ 377 (591)
++++.||.+.++-..
T Consensus 318 ~~~~~d~~~~~~~~~ 332 (343)
T 3lrv_A 318 DVVCGDGGIAAILKT 332 (343)
T ss_dssp EEEEETTEEEEEEEC
T ss_pred EEEecCCceEEEEec
Confidence 999999999988765
No 122
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=100.00 E-value=8e-31 Score=262.65 Aligned_cols=279 Identities=12% Similarity=0.136 Sum_probs=230.3
Q ss_pred CCCCcEEEeCCCCcEEEEEeCCCcEEEEcCC-CceeE-----eeccCCcceEEEEEeecCCEEEEecCCCeEEEEeeccc
Q psy710 7 PYQPTAIAFDPIQKLLAIGTKTGSLRLLGRP-GVDAH-----VRHETDAAVIQMQFLTNEGALITATADDSLHLWNFRQK 80 (591)
Q Consensus 7 ~~~v~~~~~spdg~~la~g~~dg~i~lw~~~-~~~~~-----~~~~h~~~v~~l~~sp~~~~l~s~~~d~~i~vw~~~~~ 80 (591)
...+.+++|+|+++++++++.++.|++||+. +.... .+.+|...|.+++|+|+++++++++.|+.|++||++++
T Consensus 122 ~~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~ 201 (433)
T 3bws_A 122 GFQPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTL 201 (433)
T ss_dssp SSCBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTC
T ss_pred CCCceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCc
Confidence 3456799999988888888889999999988 44444 34588899999999999999999999999999999887
Q ss_pred CceeeeEEEeeccceEEEEeeCCceEEEEEe-CCCcEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCcc
Q psy710 81 RPEIVHSLKFQRERITYIHLPLQSKWLYVGT-EKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPS 159 (591)
Q Consensus 81 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (591)
+ .+..+..|...+.+++|+|+++.+++++ .++.|++||+.+++....+.
T Consensus 202 ~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~---------------------------- 251 (433)
T 3bws_A 202 A--YKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTD---------------------------- 251 (433)
T ss_dssp C--EEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECC----------------------------
T ss_pred e--EEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEec----------------------------
Confidence 4 6777888888999999999999886555 78999999998877655443
Q ss_pred eeeeccCCCCceEEEECCCCCEEEEEe--------CCCcEEEeCCCCeEEEEeccCCCcEEEEEEEcCCceE-EEEeCCC
Q psy710 160 KTFRHGFPYQPTAIAFDPIQKLLAIGT--------KTGSLRLLGRPGVDAHVRHETDAAVIQMQFLTNEGAL-ITATADD 230 (591)
Q Consensus 160 ~~~~~~~~~~v~~~~~~~~~~~l~~~~--------~dg~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~ 230 (591)
....+.+++|+|+++.+++++ .||.|++||+.+.+......+...+..++|+|+++.+ ++++.++
T Consensus 252 ------~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~ 325 (433)
T 3bws_A 252 ------KIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPGNKRHIVSGNTENKIYVSDMCCS 325 (433)
T ss_dssp ------CCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEECEEEEEECSSTTEEEEEETTTT
T ss_pred ------CCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCCCcceEEECCCCCEEEEEecCCC
Confidence 123478999999999999888 5889999999888776655555588999999999755 5668899
Q ss_pred cEEEEEccCCCcceEEeeeeccccEEEEEecCCCCEEEEEeC---------------CccEEEEEccCccccceeeehhh
Q psy710 231 SLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGTE---------------KGNIHVVNIESFTLSGYIINWNK 295 (591)
Q Consensus 231 ~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~---------------dg~i~i~d~~~~~~~~~~~~~~~ 295 (591)
.|++||+.++ +.+..+. +...+.+++|+|+++++++++. ||.|++||+.+++...
T Consensus 326 ~v~v~d~~~~--~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~------- 395 (433)
T 3bws_A 326 KIEVYDLKEK--KVQKSIP-VFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKE------- 395 (433)
T ss_dssp EEEEEETTTT--EEEEEEE-CSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEE-------
T ss_pred EEEEEECCCC--cEEEEec-CCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEE-------
Confidence 9999999977 5666665 5578999999999999988876 5799999998877632
Q ss_pred hccccccCCCCCeEEEecCCCCCCeEEEEEc-CCEEEEEeccc
Q psy710 296 AIDVCMKTHPGPIIHLSDNPLDPSKLLLAYE-TGLVVHWDLKL 337 (591)
Q Consensus 296 ~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~-dg~i~iwd~~~ 337 (591)
.+.. ...+.+++|+| ++++|++++. |+.|++|+++.
T Consensus 396 ----~~~~-~~~~~~~~~s~-dg~~l~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 396 ----FWEA-GNQPTGLDVSP-DNRYLVISDFLDHQIRVYRRDG 432 (433)
T ss_dssp ----EEEC-SSSEEEEEECT-TSCEEEEEETTTTEEEEEEETT
T ss_pred ----EecC-CCCCceEEEcC-CCCEEEEEECCCCeEEEEEecC
Confidence 2222 45789999999 9999998875 99999999863
No 123
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=100.00 E-value=4.8e-30 Score=284.09 Aligned_cols=371 Identities=8% Similarity=0.045 Sum_probs=277.1
Q ss_pred CCCCCcEEEeCCCCcEEEEEeCCCcEEEEcCCCceeEeeccCCcceEEEEEeecCCEEEEecCC------CeEEEEeecc
Q psy710 6 FPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGVDAHVRHETDAAVIQMQFLTNEGALITATAD------DSLHLWNFRQ 79 (591)
Q Consensus 6 h~~~v~~~~~spdg~~la~g~~dg~i~lw~~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~~~d------~~i~vw~~~~ 79 (591)
+...+...+||| +.||.++. +.|++|++.+.....+..|...+.+++|||||++|++++.+ ..|.+|++.+
T Consensus 13 ~~~~~~~~~~S~--~~iaf~~~-~~l~~~~~~gg~~~~lt~~~~~v~~~~~SPDG~~la~~s~~~~~~~~~~i~~~d~~~ 89 (1045)
T 1k32_A 13 MPNLLLNPDIHG--DRIIFVCC-DDLWEHDLKSGSTRKIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGEN 89 (1045)
T ss_dssp CCCCCEEEEEET--TEEEEEET-TEEEEEETTTCCEEEEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTT
T ss_pred ccceEeCcEEeC--CEEEEEEC-CcEEEEECCCCcEEEeeeCCCcccCeEECCCCCEEEEEEeeccCCCCCeEEEEECCC
Confidence 556789999996 57777765 68999999988888899999999999999999999987643 4789999887
Q ss_pred cCceeeeEEEeeccce-------EEEEeeCCceEEEEEeCC------CcEEEEEeeeeeeeceecccccccccCCCCCCC
Q psy710 80 KRPEIVHSLKFQRERI-------TYIHLPLQSKWLYVGTEK------GNIHVVNIESFTLSGYIINWNKAIDVCMKTHPG 146 (591)
Q Consensus 80 ~~~~~~~~~~~~~~~v-------~~~~~~~~~~~l~~~~~d------~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (591)
++ ...+..|...+ ..++|+|||+.+++++.+ ..|+.|++.+++........... ..+++ +
T Consensus 90 g~---~~~lt~~~~~~~~~~~~~~~~~~SpDg~ll~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~--~~~sp-G- 162 (1045)
T 1k32_A 90 GE---IKRITYFSGKSTGRRMFTDVAGFDPDGNLIISTDAMQPFSSMTCLYRVENDGINFVPLNLGPATH--ILFAD-G- 162 (1045)
T ss_dssp TE---EEECCCCCEEEETTEECSEEEEECTTCCEEEEECTTSSSTTCCEEEEEEGGGTEEEECCSCSCSE--EEEET-T-
T ss_pred CC---eEEcccCCCcccccccccccccCCCCCEEEEEECCcCCCcccceEEEEECCCCCeEEecCCCcce--eeeCC-C-
Confidence 63 56777888888 999999999977777644 35888888777654333221110 01122 1
Q ss_pred ceec---------------------c-CCCCcCcceeeeccCCCCceEEEECCCCCEEEEEeCCCcEEEeCCC--CeEEE
Q psy710 147 PIIH---------------------L-SDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRP--GVDAH 202 (591)
Q Consensus 147 ~~~~---------------------~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~--~~~~~ 202 (591)
.+.. + .... .....+ .+|...+.+++|+++ .+++++..++.+.+|... +....
T Consensus 163 ~l~~~~~~~~~~~~~~~~g~~~~~lw~~~~~-~~~~~l-~~~~~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~g~~~~ 239 (1045)
T 1k32_A 163 RRVIGRNTFELPHWKGYRGGTRGKIWIEVNS-GAFKKI-VDMSTHVSSPVIVGH-RIYFITDIDGFGQIYSTDLDGKDLR 239 (1045)
T ss_dssp EEEEEESCSCCTTSTTCCSTTCCEEEEEEET-TEEEEE-ECCSSCCEEEEEETT-EEEEEECTTSSCEEEEEETTSCSCE
T ss_pred EEEEeccCCCccccccccCCCcCCEEEECCC-CCeEEC-cCCCCcccceEEeCC-EEEEEEeccCceEEEEEeCCCCcce
Confidence 1110 0 0001 112233 578889999999998 677788888988888643 33333
Q ss_pred EeccCCCcEEEEEEEcCCceEEEEeCCCcEEEEEccCCCcceEEeeee-----------ccccEEEEEec-CCCCEEEEE
Q psy710 203 VRHETDAAVIQMQFLTNEGALITATADDSLHLWNFRQKRPEIVHSLKF-----------QRERITYIHLP-LQSKWLYVG 270 (591)
Q Consensus 203 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~-----------~~~~v~~~~~s-p~~~~l~~~ 270 (591)
....+ ..+...+|+|+|++|+.+. ++.|.+||+... .+..+.. +...+..++|+ |||++|+++
T Consensus 240 ~l~~~-~~~~~~~~SpDG~~la~~~-~~~i~~~d~~~~---~l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~ 314 (1045)
T 1k32_A 240 KHTSF-TDYYPRHLNTDGRRILFSK-GGSIYIFNPDTE---KIEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFV 314 (1045)
T ss_dssp ECCCC-CSSCEEEEEESSSCEEEEE-TTEEEEECTTTC---CEEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEE
T ss_pred EecCC-CCcceeeEcCCCCEEEEEe-CCEEEEecCCce---EeeeeccCcccccccccccccccceeeecCCCCCEEEEE
Confidence 33222 2456779999999998874 799999999443 3334444 33468899999 999999988
Q ss_pred eCCccEEEEEccCccccceeeehhhhccccccCCCC-CeEEEecCCCCCCeEEEEEcCCEEE-EEecccceEEEEeccCC
Q psy710 271 TEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPG-PIIHLSDNPLDPSKLLLAYETGLVV-HWDLKLKRAEFRWQCSE 348 (591)
Q Consensus 271 ~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~sp~~~~~l~~~~~dg~i~-iwd~~~~~~~~~~~~~~ 348 (591)
+ ++.+++|++..++.. .+..|.. .+..++|+ |++.|++++.+..++ +||+.+++......+..
T Consensus 315 ~-~~~i~~~~~~~~~~~------------~~~~~~~~~~~~~~~s--dg~~l~~~s~~~~l~~~~d~~~~~~~~l~~~~~ 379 (1045)
T 1k32_A 315 S-RGQAFIQDVSGTYVL------------KVPEPLRIRYVRRGGD--TKVAFIHGTREGDFLGIYDYRTGKAEKFEENLG 379 (1045)
T ss_dssp E-TTEEEEECTTSSBEE------------ECSCCSCEEEEEECSS--SEEEEEEEETTEEEEEEEETTTCCEEECCCCCC
T ss_pred E-cCEEEEEcCCCCceE------------EccCCCcceEEeeeEc--CCCeEEEEECCCceEEEEECCCCCceEecCCcc
Confidence 7 789999999876542 3455666 89999999 788999988888999 99999888766666778
Q ss_pred CeeEEEEeecCCEEEEEecCCcEEEEecCCCCCceeeecccccccCCCCCCCCCcceEEEEeecCCCCcEEEEECCc
Q psy710 349 PIKSVCWHYEGKQFLCSHTDGTISTWAVRPLAKPVSVNQPHIKTNKDGKLEQCKPIQKVEWKHSRSGEGFVIFSGGL 425 (591)
Q Consensus 349 ~v~~~~~sp~g~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~g~~ 425 (591)
.+..++|+|||++|++++.++.|++||+. +++....+..| ..++..++|+| ++..|++++.
T Consensus 380 ~~~~~~~SpDG~~la~~~~~~~v~~~d~~-tg~~~~~~~~~-----------~~~v~~~~~Sp----DG~~la~~~~ 440 (1045)
T 1k32_A 380 NVFAMGVDRNGKFAVVANDRFEIMTVDLE-TGKPTVIERSR-----------EAMITDFTISD----NSRFIAYGFP 440 (1045)
T ss_dssp SEEEEEECTTSSEEEEEETTSEEEEEETT-TCCEEEEEECS-----------SSCCCCEEECT----TSCEEEEEEE
T ss_pred ceeeeEECCCCCEEEEECCCCeEEEEECC-CCceEEeccCC-----------CCCccceEECC----CCCeEEEEec
Confidence 89999999999999999999999999998 77777777677 78899999987 4455555543
No 124
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=100.00 E-value=1.3e-30 Score=239.72 Aligned_cols=283 Identities=12% Similarity=0.119 Sum_probs=197.6
Q ss_pred cEEEeCCCCc---EEEEEeCCCcEEEEcCC-C---ceeEeeccCCcceEEEEEeecCCEEEEecCCCeEEEEeecccCce
Q psy710 11 TAIAFDPIQK---LLAIGTKTGSLRLLGRP-G---VDAHVRHETDAAVIQMQFLTNEGALITATADDSLHLWNFRQKRPE 83 (591)
Q Consensus 11 ~~~~~spdg~---~la~g~~dg~i~lw~~~-~---~~~~~~~~h~~~v~~l~~sp~~~~l~s~~~d~~i~vw~~~~~~~~ 83 (591)
.++-|-..|- .++++++ ..|++|+.. + +.+++.+.|+.+|..+.|+||..-|++..- |+
T Consensus 43 ~~~~~~~~~~~~~~~~~~~~-~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-----------~~-- 108 (356)
T 2w18_A 43 SAMFWERAGCKEPCIITACE-DVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVAL-----------GN-- 108 (356)
T ss_dssp EEEEEC----CEEEEEEEES-SEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEEEEE-----------CS--
T ss_pred eeeeeccCCCCccEEEEecc-ceEEEcccCCCccceeeEEEeccCceeEEEEEcCcccceeeeee-----------cc--
Confidence 3444544332 5566665 589999966 5 678899999999999999998755544321 11
Q ss_pred eeeEEEeeccceEEEEeeCC----ceEEEEEeCCCcEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCcc
Q psy710 84 IVHSLKFQRERITYIHLPLQ----SKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPS 159 (591)
Q Consensus 84 ~~~~~~~~~~~v~~~~~~~~----~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (591)
-+...|++++|+|+ ++.+++++.+ +.+|++.+++++....
T Consensus 109 ------~~~~~v~sla~spd~~~~~~~l~s~g~~--~~v~~l~~g~lv~ss~---------------------------- 152 (356)
T 2w18_A 109 ------LEIREIRALFCSSDDESEKQVLLKSGNI--KAVLGLTKRRLVSSSG---------------------------- 152 (356)
T ss_dssp ------SSEEEEEEECC------CCEEEEEEEEE--EEEEEETTTEEEEEES----------------------------
T ss_pred ------ccccceEEEEECCCccccccEEEeCCCe--EEEEecCCCcEEEecc----------------------------
Confidence 13356889999999 9999998754 7788776544333211
Q ss_pred eeeeccCCCCceEEEECCCCCEEEEEeCCCcEEEeCCCCeEEEEeccCCCcEEEEEEEc---CCceEEEEeCCCcEEEEE
Q psy710 160 KTFRHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGVDAHVRHETDAAVIQMQFLT---NEGALITATADDSLHLWN 236 (591)
Q Consensus 160 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~v~~~~~~~---~~~~l~~~~~d~~i~~wd 236 (591)
.+|...|..++++|+|+.++. ...+ ...++.++|++ ++..|++++.|++|++||
T Consensus 153 ----~g~d~~V~~~~~s~dG~~~~s-----------------~~~~--~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWD 209 (356)
T 2w18_A 153 ----TLSDQQVEVMTFAEDGGGKEN-----------------QFLM--PPEETILTFAEVQGMQEALLGTTIMNNIVIWN 209 (356)
T ss_dssp ----SSTTCEEEEEEECTTSCEEEE-----------------EEEC--CCSSCEEEEEEEETSTTEEEEEETTSEEEEEE
T ss_pred ----cCCCCcEEEEEECCCCceeee-----------------eccC--CCceeeEEeeccCCCCceEEEecCCCcEEEEE
Confidence 134455555555555554431 1233 34778888888 779999999999999999
Q ss_pred ccCCCcceEEeeeecc---ccEEEEEecCCCCEE------------EEEeCCccEEEEEccCccccceeeehhhhccccc
Q psy710 237 FRQKRPEIVHSLKFQR---ERITYIHLPLQSKWL------------YVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCM 301 (591)
Q Consensus 237 ~~~~~~~~~~~~~~~~---~~v~~~~~sp~~~~l------------~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~ 301 (591)
++++ ++++++.+|. ..+.+++|+|+|+++ ++|+.|++|++||..+++...... ....
T Consensus 210 l~TG--k~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~------~~~p 281 (356)
T 2w18_A 210 LKTG--QLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVML------YCLP 281 (356)
T ss_dssp TTTC--CEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEE------ECCC
T ss_pred CCCC--cEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEE------eecc
Confidence 9998 7888888653 356778999999876 567889999999999887632000 0012
Q ss_pred cCCCCCeEEEecCCCCCCeEEEEEcCCEEEEEecccceEEEEec-cCCCee-EEEEeecCCEEEEEecCCcEEEEecC
Q psy710 302 KTHPGPIIHLSDNPLDPSKLLLAYETGLVVHWDLKLKRAEFRWQ-CSEPIK-SVCWHYEGKQFLCSHTDGTISTWAVR 377 (591)
Q Consensus 302 ~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~~~v~-~~~~sp~g~~l~s~~~dg~i~vwd~~ 377 (591)
.+|...+.+..+ ++.++++++.|++|+|||+.+++++..+. |...+. .++|+|||++|++|+.|++|+|||+.
T Consensus 282 ~Gh~~~~lsg~~---sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd~~ 356 (356)
T 2w18_A 282 PGQAGRFLEGDV---KDHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHYS 356 (356)
T ss_dssp TTCCCCEEEEEE---ETTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEECTTSCEEEEEEC
T ss_pred CCCcceeEcccc---CCCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEECCCcEEEecCC
Confidence 466665554444 45789999999999999999999999886 666555 68999999999999999999999963
No 125
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.98 E-value=2.3e-30 Score=263.70 Aligned_cols=334 Identities=11% Similarity=0.116 Sum_probs=256.1
Q ss_pred EeCCCCcEEEEEeCCCcEEEEcCC-CceeEeeccCCcceEEEEEeecCCEEEEecCCCeEEEEee--cccCceeeeEEEe
Q psy710 14 AFDPIQKLLAIGTKTGSLRLLGRP-GVDAHVRHETDAAVIQMQFLTNEGALITATADDSLHLWNF--RQKRPEIVHSLKF 90 (591)
Q Consensus 14 ~~spdg~~la~g~~dg~i~lw~~~-~~~~~~~~~h~~~v~~l~~sp~~~~l~s~~~d~~i~vw~~--~~~~~~~~~~~~~ 90 (591)
+|+|++.++++++.+++|.+||.. ++.+..+..+.. +..++|+|||++|++++.|++|++||+ .++ +.+..+..
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~--~~~~~i~~ 220 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEP--TKVAEIKI 220 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTTCCEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSC--EEEEEEEC
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCCceEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCC--cEEEEEec
Confidence 489999999999999999999987 566667763333 899999999999999999999999999 555 46777764
Q ss_pred eccceEEEEeeC----CceEEEEEeC-CCcEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCcceeeecc
Q psy710 91 QRERITYIHLPL----QSKWLYVGTE-KGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHG 165 (591)
Q Consensus 91 ~~~~v~~~~~~~----~~~~l~~~~~-d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (591)
...+..++|+| +++++++++. +++|.+||..++++++.+......... .. ..
T Consensus 221 -g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~--------------------~~--~~ 277 (543)
T 1nir_A 221 -GIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDT--------------------QT--YH 277 (543)
T ss_dssp -CSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSS--------------------CC--EE
T ss_pred -CCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCc--------------------cc--cc
Confidence 45679999999 9999999985 899999999998877766532111000 00 00
Q ss_pred CCCCceEEEECCCCCE-EEEEeCCCcEEEeCCCCeEEE--EeccCCCcEEEEEEEcCCceEEEE-eCCCcEEEEEccCCC
Q psy710 166 FPYQPTAIAFDPIQKL-LAIGTKTGSLRLLGRPGVDAH--VRHETDAAVIQMQFLTNEGALITA-TADDSLHLWNFRQKR 241 (591)
Q Consensus 166 ~~~~v~~~~~~~~~~~-l~~~~~dg~i~i~d~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~~wd~~~~~ 241 (591)
....+..+.++|+++. +++...++.|.+||....+.. ........+..+.|+|++++|+++ ..+++|.+||..++
T Consensus 278 ~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg- 356 (543)
T 1nir_A 278 PEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDR- 356 (543)
T ss_dssp SCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTT-
T ss_pred cCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECCCC-
Confidence 1236789999997654 556677899999998764321 122334578889999999987665 45889999999988
Q ss_pred cceEEeeee----ccccEEEEEecCC-CCEEEEEe-CCccEEEEEccC-------ccccceeeehhhhccccccCCCCCe
Q psy710 242 PEIVHSLKF----QRERITYIHLPLQ-SKWLYVGT-EKGNIHVVNIES-------FTLSGYIINWNKAIDVCMKTHPGPI 308 (591)
Q Consensus 242 ~~~~~~~~~----~~~~v~~~~~sp~-~~~l~~~~-~dg~i~i~d~~~-------~~~~~~~~~~~~~~~~~~~~~~~~v 308 (591)
+++..+.. |.+....+ ++|+ +..++++. .|++|.+||+.+ .+. ...+..|...+
T Consensus 357 -~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~-----------v~~l~~~g~~~ 423 (543)
T 1nir_A 357 -RLSALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKK-----------VAELQGQGGGS 423 (543)
T ss_dssp -EEEEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSE-----------EEEEECSCSCC
T ss_pred -eEEEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeE-----------EEEEEcCCCCc
Confidence 67777664 44333333 4677 56666665 579999999988 333 34667788888
Q ss_pred EEEecCCCCCCeEEEEE-------cCCEEEEEecccceEE-EEe---------ccCCCeeEEEEeecCCEEEEEe-----
Q psy710 309 IHLSDNPLDPSKLLLAY-------ETGLVVHWDLKLKRAE-FRW---------QCSEPIKSVCWHYEGKQFLCSH----- 366 (591)
Q Consensus 309 ~~~~~sp~~~~~l~~~~-------~dg~i~iwd~~~~~~~-~~~---------~~~~~v~~~~~sp~g~~l~s~~----- 366 (591)
..++++| ++++|++++ .+++|.+||+.+++.. ..+ .+...+..++|+|+|+.|+++.
T Consensus 424 ~~v~~~p-dg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~ 502 (543)
T 1nir_A 424 LFIKTHP-KSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKN 502 (543)
T ss_dssp CCEECCT-TCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSSSSEEEEEEECCTT
T ss_pred eEEEcCC-CCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCceEeccCCCCCCEEEEEeecCCC
Confidence 8999999 999999987 2679999999998766 443 3567899999999999988763
Q ss_pred cCCcEEEEecCCCCCceeeeccc
Q psy710 367 TDGTISTWAVRPLAKPVSVNQPH 389 (591)
Q Consensus 367 ~dg~i~vwd~~~~~~~~~~~~~~ 389 (591)
.|+.|.|||.. +++++++++..
T Consensus 503 ~~~~i~v~D~~-t~~~~~~i~~~ 524 (543)
T 1nir_A 503 DSSALVVVDDK-TLKLKAVVKDP 524 (543)
T ss_dssp SCCEEEEEETT-TTEEEEEECCT
T ss_pred CCCeEEEEECC-CceEEEeecCC
Confidence 47999999999 88888888754
No 126
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.97 E-value=3.5e-30 Score=254.82 Aligned_cols=300 Identities=12% Similarity=0.056 Sum_probs=235.6
Q ss_pred cceEEEEEeecCC-EEEEec----CCC----eEEEEee--cccCceeeeEEEeeccceEEEEeeC--------------C
Q psy710 49 AAVIQMQFLTNEG-ALITAT----ADD----SLHLWNF--RQKRPEIVHSLKFQRERITYIHLPL--------------Q 103 (591)
Q Consensus 49 ~~v~~l~~sp~~~-~l~s~~----~d~----~i~vw~~--~~~~~~~~~~~~~~~~~v~~~~~~~--------------~ 103 (591)
..+....|.+.+. ++++|+ .|| ++++||+ .+++......+.+|...+..+++++ .
T Consensus 63 ~~~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~ 142 (415)
T 2hqs_A 63 QEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAF 142 (415)
T ss_dssp GGCCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCCCT
T ss_pred cCcCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCCcC
Confidence 4677788888874 565775 467 8999999 8876322356888988888777764 1
Q ss_pred ceEEEEEeCC------CcEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECC
Q psy710 104 SKWLYVGTEK------GNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDP 177 (591)
Q Consensus 104 ~~~l~~~~~d------~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 177 (591)
+..++.++.+ +.|++||+.... ...+ .+|...+.+++|+|
T Consensus 143 ~~~l~~~s~~~~~~~~~~i~i~d~~g~~-~~~l---------------------------------~~~~~~v~~~~~Sp 188 (415)
T 2hqs_A 143 RTRIAYVVQTNGGQFPYELRVSDYDGYN-QFVV---------------------------------HRSPQPLMSPAWSP 188 (415)
T ss_dssp TCEEEEEEECSSSSCCEEEEEEETTSCS-CEEE---------------------------------EEESSCEEEEEECT
T ss_pred CCEEEEEEecCCCCccceEEEEcCCCCC-CEEE---------------------------------eCCCCcceeeEEcC
Confidence 5556655553 799999987532 2222 13566789999999
Q ss_pred CCCEEEEEeCCC---cEEEeCCCCeEEEEeccCCCcEEEEEEEcCCceEE-EEeCCCc--EEEEEccCCCcceEEeeeec
Q psy710 178 IQKLLAIGTKTG---SLRLLGRPGVDAHVRHETDAAVIQMQFLTNEGALI-TATADDS--LHLWNFRQKRPEIVHSLKFQ 251 (591)
Q Consensus 178 ~~~~l~~~~~dg---~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~--i~~wd~~~~~~~~~~~~~~~ 251 (591)
+++.|++++.++ .|++||+.+++......+...+.+++|+|+|+.|+ +++.++. |++||+.++ +. ..+..|
T Consensus 189 dg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~--~~-~~l~~~ 265 (415)
T 2hqs_A 189 DGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASG--QI-RQVTDG 265 (415)
T ss_dssp TSSEEEEEECTTSSCEEEEEETTTCCEEEEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTC--CE-EECCCC
T ss_pred CCCEEEEEEecCCCcEEEEEECCCCcEEEeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCC--CE-EeCcCC
Confidence 999999999875 99999999887776666667899999999999887 5665554 999999887 33 566777
Q ss_pred cccEEEEEecCCCCEEEEEeC-Cc--cEEEEEccCccccceeeehhhhccccccCCCCCeEEEecCCCCCCeEEEEEcC-
Q psy710 252 RERITYIHLPLQSKWLYVGTE-KG--NIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKLLLAYET- 327 (591)
Q Consensus 252 ~~~v~~~~~sp~~~~l~~~~~-dg--~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~d- 327 (591)
...+.+++|+|||++|++++. ++ .|++||+.+++.. .+..+...+.+++|+| ++++|++++.+
T Consensus 266 ~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~------------~l~~~~~~~~~~~~sp-dG~~l~~~~~~~ 332 (415)
T 2hqs_A 266 RSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQ------------RITWEGSQNQDADVSS-DGKFMVMVSSNG 332 (415)
T ss_dssp SSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCE------------ECCCSSSEEEEEEECT-TSSEEEEEEECS
T ss_pred CCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEE------------EEecCCCcccCeEECC-CCCEEEEEECcC
Confidence 788999999999999988876 44 6777888876542 3345667889999999 99999988764
Q ss_pred --CEEEEEecccceEEEEeccCCCeeEEEEeecCCEEEEEecCC---cEEEEecCCCCCceeeecccccccCCCCCCCCC
Q psy710 328 --GLVVHWDLKLKRAEFRWQCSEPIKSVCWHYEGKQFLCSHTDG---TISTWAVRPLAKPVSVNQPHIKTNKDGKLEQCK 402 (591)
Q Consensus 328 --g~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~g~~l~s~~~dg---~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (591)
..|++||+.+++......+. .+.+++|+|||++|++++.|+ .|++||+. ++....+..| ..
T Consensus 333 g~~~i~~~d~~~~~~~~l~~~~-~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~--g~~~~~l~~~-----------~~ 398 (415)
T 2hqs_A 333 GQQHIAKQDLATGGVQVLSSTF-LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTD--GRFKARLPAT-----------DG 398 (415)
T ss_dssp SCEEEEEEETTTCCEEECCCSS-SCEEEEECTTSSEEEEEEEETTEEEEEEEETT--SCCEEECCCS-----------SS
T ss_pred CceEEEEEECCCCCEEEecCCC-CcCCeEEcCCCCEEEEEEcCCCccEEEEEECC--CCcEEEeeCC-----------CC
Confidence 68999999998886544454 899999999999999988877 79999987 6677788888 78
Q ss_pred cceEEEEeec
Q psy710 403 PIQKVEWKHS 412 (591)
Q Consensus 403 ~i~~~~~~~~ 412 (591)
.|.+++|+|.
T Consensus 399 ~v~~~~~~~~ 408 (415)
T 2hqs_A 399 QVKFPAWSPY 408 (415)
T ss_dssp EEEEEEECCC
T ss_pred CCcCCccccc
Confidence 9999999984
No 127
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.97 E-value=3.7e-31 Score=260.41 Aligned_cols=258 Identities=10% Similarity=0.055 Sum_probs=174.0
Q ss_pred eccceEEEEeeCCceEEEEEeCCCcEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCc
Q psy710 91 QRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQP 170 (591)
Q Consensus 91 ~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 170 (591)
|........+++++..|++++.|++|++||..+++....... .. ..+|.+.|
T Consensus 88 ~~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~---------------------------~~-~~gH~~~v 139 (393)
T 4gq1_A 88 HDGDGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVL---------------------------GG-KSGHHNFV 139 (393)
T ss_dssp ---------CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEE---------------------------CT-TTSCSSCE
T ss_pred cCCCcceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeee---------------------------cc-cCCCCCce
Confidence 444455566777889999999999999999988664332110 00 14789999
Q ss_pred eEEEECC--------CCCEEEEEeCCCcEEEeCCCCe-EEEEeccCCCcEEEEEEEcCCc-eEEEEeCCCcEEEEEccCC
Q psy710 171 TAIAFDP--------IQKLLAIGTKTGSLRLLGRPGV-DAHVRHETDAAVIQMQFLTNEG-ALITATADDSLHLWNFRQK 240 (591)
Q Consensus 171 ~~~~~~~--------~~~~l~~~~~dg~i~i~d~~~~-~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~~wd~~~~ 240 (591)
++++|+| |+++||+++.|++|++||+... .......+...+.+++|+|++. +|++++.|++|++||++++
T Consensus 140 ~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~ 219 (393)
T 4gq1_A 140 NDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLN 219 (393)
T ss_dssp EEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCC
T ss_pred EEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCC
Confidence 9999998 7899999999999999998654 4445566677999999999875 7999999999999999876
Q ss_pred Ccce-----------------------EEeeeeccccEEEEEec-CCCCEEEEEeCCccEEEEEccCccccceeeehhhh
Q psy710 241 RPEI-----------------------VHSLKFQRERITYIHLP-LQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKA 296 (591)
Q Consensus 241 ~~~~-----------------------~~~~~~~~~~v~~~~~s-p~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~ 296 (591)
+... .....+|...+.++.|+ |+++.+++++.|+++++||+...+...........
T Consensus 220 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~ 299 (393)
T 4gq1_A 220 LSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMK 299 (393)
T ss_dssp C----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC---------------
T ss_pred cccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCc
Confidence 3111 01123456678888876 79999999999999999999876543211000000
Q ss_pred --------ccccccCCCCCeEEEecCCCCCCeEEEEEcCCEEEEEecccceEEEE-eccCCCeeEEEEeecCCEEEEEec
Q psy710 297 --------IDVCMKTHPGPIIHLSDNPLDPSKLLLAYETGLVVHWDLKLKRAEFR-WQCSEPIKSVCWHYEGKQFLCSHT 367 (591)
Q Consensus 297 --------~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~iwd~~~~~~~~~-~~~~~~v~~~~~sp~g~~l~s~~~ 367 (591)
.......+...+..+.+.+.++.++++|+.||.|++||+.+++.... ..|..+|.+++|+|||++||+++.
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA~as~ 379 (393)
T 4gq1_A 300 LGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIATE 379 (393)
T ss_dssp ----CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEEECSSCEEEEEECTTSSEEEEEES
T ss_pred cccEEEccccccccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEecCCCCcEEEEEEcCCCCEEEEEeC
Confidence 00011111222222333331333566788899999999998876544 458899999999999999999987
Q ss_pred CCcEEEEecC
Q psy710 368 DGTISTWAVR 377 (591)
Q Consensus 368 dg~i~vwd~~ 377 (591)
|| +.+|.+.
T Consensus 380 ~G-v~lvrL~ 388 (393)
T 4gq1_A 380 GS-VLLTRLM 388 (393)
T ss_dssp SE-EEEEEEG
T ss_pred CC-eEEEEEe
Confidence 76 6666654
No 128
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.7e-30 Score=251.21 Aligned_cols=269 Identities=9% Similarity=0.027 Sum_probs=202.7
Q ss_pred EeCCCCcEEEEEeCCCcEEEEcCC-CceeEeeccCCcceEEEEEeecCCEEEEecCCCeEEEEeeccc-------Cceee
Q psy710 14 AFDPIQKLLAIGTKTGSLRLLGRP-GVDAHVRHETDAAVIQMQFLTNEGALITATADDSLHLWNFRQK-------RPEIV 85 (591)
Q Consensus 14 ~~spdg~~la~g~~dg~i~lw~~~-~~~~~~~~~h~~~v~~l~~sp~~~~l~s~~~d~~i~vw~~~~~-------~~~~~ 85 (591)
.+.+++++||+|+.||.|++||+. +..+..+. ...|.++.|+|+ +++++.|++|++|+.... ....+
T Consensus 43 ~~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~--~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~ 117 (343)
T 3lrv_A 43 SMYYDKWVCMCRCEDGALHFTQLKDSKTITTIT--TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVL 117 (343)
T ss_dssp SSSEEEEEEEEEEETTEEEEEEESSSSCEEEEE--EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEE
T ss_pred hhcCCCCEEEEECCCCcEEEEECCCCcEEEEEe--cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCccee
Confidence 345678999999999999999987 55555554 467888889988 999999999999976532 11223
Q ss_pred eEEE-eeccceEEEEeeC--CceEEEEEeCCCcEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCcceee
Q psy710 86 HSLK-FQRERITYIHLPL--QSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTF 162 (591)
Q Consensus 86 ~~~~-~~~~~v~~~~~~~--~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (591)
..+. .|...|.+++|+| +++++++++.|+.|++||+++++......
T Consensus 118 ~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~------------------------------- 166 (343)
T 3lrv_A 118 REIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHS------------------------------- 166 (343)
T ss_dssp EEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEEC-------------------------------
T ss_pred EEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEe-------------------------------
Confidence 3333 5668899999999 99999999999999999999876543332
Q ss_pred eccCCCCceEEEECCCCCEEEEEeCCCcEEEeCCCCeEEE--Eecc-CCCcEEEEEEEcCCceEEEEeCCCcEEEEEccC
Q psy710 163 RHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGVDAH--VRHE-TDAAVIQMQFLTNEGALITATADDSLHLWNFRQ 239 (591)
Q Consensus 163 ~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~--~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~ 239 (591)
..+...+.+++|+|++++|++|+.||.|++||+.+.+.. .... |..+|.+++|+|++.+|++++. +.|++||+++
T Consensus 167 -~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~~-~~v~iwd~~~ 244 (343)
T 3lrv_A 167 -AKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVECD-QTVVCFDLRK 244 (343)
T ss_dssp -CCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEES-SBEEEEETTS
T ss_pred -cCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEeC-CeEEEEEcCC
Confidence 134456899999999999999999999999999876644 3333 6789999999999999999994 5999999998
Q ss_pred CCcceEEeee---eccccE--EEEEecCCCCEEEEEeC-CccEEEEEccCccccceeeehhhhccccccCCCCCeEEEec
Q psy710 240 KRPEIVHSLK---FQRERI--TYIHLPLQSKWLYVGTE-KGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSD 313 (591)
Q Consensus 240 ~~~~~~~~~~---~~~~~v--~~~~~sp~~~~l~~~~~-dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 313 (591)
. +.+..+. .|...+ .+++|+|++++|++++. |+.+++|++...... ... .++..++|
T Consensus 245 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~~~~-------------~~~--~~~~~~~~ 307 (343)
T 3lrv_A 245 D--VGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDKKTKN-------------WTK--DEESALCL 307 (343)
T ss_dssp S--TTCBSSCCCBC-----CCEEEEECTTSSEEEEEETTTTEEEEEEECTTTCS-------------EEE--EEEEECCC
T ss_pred C--CcceeecccccccccccceEEEECCCCCEEEEecCCCCcEEEEEEcccccc-------------eEe--cCceeEec
Confidence 7 3333332 233333 36999999999999988 999999999765431 111 45667777
Q ss_pred CC--CCCCeEEEEEcCCEEEEEeccc
Q psy710 314 NP--LDPSKLLLAYETGLVVHWDLKL 337 (591)
Q Consensus 314 sp--~~~~~l~~~~~dg~i~iwd~~~ 337 (591)
++ .+...+++++.|+.++++-...
T Consensus 308 ~~~~~~~~~l~~~~~d~~~~~~~~~~ 333 (343)
T 3lrv_A 308 QSDTADFTDMDVVCGDGGIAAILKTN 333 (343)
T ss_dssp ----CCCCEEEEEEETTEEEEEEECS
T ss_pred CccccccceeEEEecCCceEEEEecC
Confidence 75 2456888899999988775443
No 129
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.97 E-value=1.5e-30 Score=256.07 Aligned_cols=280 Identities=12% Similarity=0.134 Sum_probs=193.0
Q ss_pred CCCcEEEeC---CCC-cEEEEEeCCCcEEEEcCCC--------ceeE--eeccCCcceEEEE------------------
Q psy710 8 YQPTAIAFD---PIQ-KLLAIGTKTGSLRLLGRPG--------VDAH--VRHETDAAVIQMQ------------------ 55 (591)
Q Consensus 8 ~~v~~~~~s---pdg-~~la~g~~dg~i~lw~~~~--------~~~~--~~~~h~~~v~~l~------------------ 55 (591)
....++.|. |++ +++++| .++.|.+|+... .... ....+..++..+.
T Consensus 16 ~~p~~~~w~~~~~~~~~l~a~g-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (393)
T 4gq1_A 16 VRPYTTTWCSQSPSCSNLLAIG-HDTGITIYCASEEQTPGSTGLTLQELFTIQTGLPTLHLSFSSSCSYSENLHDGDGNV 94 (393)
T ss_dssp CCEEEEEECTTSGGGTTEEEEE-ESSEEEEEEEEECCSSSCCSEEEEEEEEEECSSCEEEEEECTTCEEECC--------
T ss_pred CCCeEEEEeCCCCCCCCEEEEE-CCCCEEEEECCCCCcccccccceeeeEEEecCCCeeeEeecCCccccccccCCCcce
Confidence 445667774 444 455555 577899997421 1111 1112333444444
Q ss_pred --EeecCCEEEEecCCCeEEEEeecccCce---eeeEEEeeccceEEEEeeC--------CceEEEEEeCCCcEEEEEee
Q psy710 56 --FLTNEGALITATADDSLHLWNFRQKRPE---IVHSLKFQRERITYIHLPL--------QSKWLYVGTEKGNIHVVNIE 122 (591)
Q Consensus 56 --~sp~~~~l~s~~~d~~i~vw~~~~~~~~---~~~~~~~~~~~v~~~~~~~--------~~~~l~~~~~d~~i~vwd~~ 122 (591)
+++++.+|++++.|++|++||.++++.. .+..+.+|.+.|++++|+| |+++|++++.|++|++||+.
T Consensus 95 ~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~ 174 (393)
T 4gq1_A 95 NSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLT 174 (393)
T ss_dssp --CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEE
T ss_pred eecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECC
Confidence 4455678999999999999999887421 2334678999999999998 89999999999999999998
Q ss_pred eeeeeceecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCCC-CEEEEEeCCCcEEEeCCCCeEE
Q psy710 123 SFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQ-KLLAIGTKTGSLRLLGRPGVDA 201 (591)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~ 201 (591)
++.....+. +|...+.+++|+|++ ++|++++.||.|++||+.+.+.
T Consensus 175 ~~~~~~~~~---------------------------------~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~ 221 (393)
T 4gq1_A 175 DEGPILAGY---------------------------------PLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLS 221 (393)
T ss_dssp TTEEEEEEE---------------------------------ECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC-
T ss_pred CCceeeeec---------------------------------CCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcc
Confidence 765443332 466778999999987 5899999999999999876543
Q ss_pred EEe--------------------------ccCCCcEEEEEEE-cCCceEEEEeCCCcEEEEEccCCCcceEEeeeecccc
Q psy710 202 HVR--------------------------HETDAAVIQMQFL-TNEGALITATADDSLHLWNFRQKRPEIVHSLKFQRER 254 (591)
Q Consensus 202 ~~~--------------------------~~~~~~v~~~~~~-~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~ 254 (591)
... ..+...+.++.|+ ++++.|++++.|+.+++||+... .....+..+...
T Consensus 222 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~--~~~~~l~~~~~~ 299 (393)
T 4gq1_A 222 AEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFAN--NDYNEISDSTMK 299 (393)
T ss_dssp ---------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-----------------
T ss_pred cccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccC--CCCceEeeecCc
Confidence 211 1234578889987 79999999999999999999876 344444444444
Q ss_pred EEEEEecC--------------------CCCEEEEEeCCccEEEEEccCccccceeeehhhhccccccCCCCCeEEEecC
Q psy710 255 ITYIHLPL--------------------QSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDN 314 (591)
Q Consensus 255 v~~~~~sp--------------------~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s 314 (591)
+..+.+.| ++.++++|+.||.|++||+.+++.. ..+..|..+|.+++|+
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~-----------~~~~~~~~~V~svafs 368 (393)
T 4gq1_A 300 LGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSN-----------SIPIQLGMPIVDFCWH 368 (393)
T ss_dssp ----CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCC-----------EEEEECSSCEEEEEEC
T ss_pred cccEEEccccccccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEE-----------EEecCCCCcEEEEEEc
Confidence 43333332 3446778899999999999987663 2556788899999999
Q ss_pred CCCCCeEEEEEcCCEEEEEecc
Q psy710 315 PLDPSKLLLAYETGLVVHWDLK 336 (591)
Q Consensus 315 p~~~~~l~~~~~dg~i~iwd~~ 336 (591)
| |+++||+++.+| +.+|.+.
T Consensus 369 p-dG~~LA~as~~G-v~lvrL~ 388 (393)
T 4gq1_A 369 Q-DGSHLAIATEGS-VLLTRLM 388 (393)
T ss_dssp T-TSSEEEEEESSE-EEEEEEG
T ss_pred C-CCCEEEEEeCCC-eEEEEEe
Confidence 9 999999998876 4466553
No 130
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.97 E-value=4.1e-30 Score=254.28 Aligned_cols=299 Identities=10% Similarity=0.073 Sum_probs=235.9
Q ss_pred CCCcEEEeCCCC-cEEEEEe----CCC----cEEEEcC--C-Ccee--EeeccCCcceEEEEEeec--------------
Q psy710 8 YQPTAIAFDPIQ-KLLAIGT----KTG----SLRLLGR--P-GVDA--HVRHETDAAVIQMQFLTN-------------- 59 (591)
Q Consensus 8 ~~v~~~~~spdg-~~la~g~----~dg----~i~lw~~--~-~~~~--~~~~~h~~~v~~l~~sp~-------------- 59 (591)
..+...+|++.| +++++|+ .+| .++|||+ . ++.+ ..+.+|...+..+++++.
T Consensus 63 ~~~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~ 142 (415)
T 2hqs_A 63 QEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAF 142 (415)
T ss_dssp GGCCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCCCT
T ss_pred cCcCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCCcC
Confidence 466777888887 4666776 467 8999999 5 5555 457889888888887752
Q ss_pred CCEEEEecCC------CeEEEEeecccCceeeeEEEeeccceEEEEeeCCceEEEEEeCCC---cEEEEEeeeeeeecee
Q psy710 60 EGALITATAD------DSLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEKG---NIHVVNIESFTLSGYI 130 (591)
Q Consensus 60 ~~~l~s~~~d------~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~---~i~vwd~~~~~~~~~~ 130 (591)
+..++.++.+ +.|++||++.+ ....+..|...+.+++|+|+++.|++++.++ .|++||+.+++....
T Consensus 143 ~~~l~~~s~~~~~~~~~~i~i~d~~g~---~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l- 218 (415)
T 2hqs_A 143 RTRIAYVVQTNGGQFPYELRVSDYDGY---NQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQV- 218 (415)
T ss_dssp TCEEEEEEECSSSSCCEEEEEEETTSC---SCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEE-
T ss_pred CCEEEEEEecCCCCccceEEEEcCCCC---CCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEe-
Confidence 5666666554 79999999854 3577788999999999999999999999875 999999988765422
Q ss_pred cccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCCCCEEE-EEeCCCc--EEEeCCCCeEEEEeccC
Q psy710 131 INWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLA-IGTKTGS--LRLLGRPGVDAHVRHET 207 (591)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~--i~i~d~~~~~~~~~~~~ 207 (591)
..+...+.+++|+|||+.|+ +++.++. |++||+.+.+......+
T Consensus 219 ---------------------------------~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~~l~~~ 265 (415)
T 2hqs_A 219 ---------------------------------ASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDG 265 (415)
T ss_dssp ---------------------------------ECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEECCCC
T ss_pred ---------------------------------ecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEEeCcCC
Confidence 13455689999999999888 5665554 99999988877776667
Q ss_pred CCcEEEEEEEcCCceEEEEeC-CC--cEEEEEccCCCcceEEeeeeccccEEEEEecCCCCEEEEEeCC---ccEEEEEc
Q psy710 208 DAAVIQMQFLTNEGALITATA-DD--SLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEK---GNIHVVNI 281 (591)
Q Consensus 208 ~~~v~~~~~~~~~~~l~~~~~-d~--~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d---g~i~i~d~ 281 (591)
...+.+++|+|+|++|++++. ++ .|.+||+.+++ ...+..+...+..++|+|+|++|++++.+ ..|++||+
T Consensus 266 ~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~---~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~ 342 (415)
T 2hqs_A 266 RSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGA---PQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDL 342 (415)
T ss_dssp SSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSC---CEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEET
T ss_pred CCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCC---EEEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEEC
Confidence 778999999999999988876 44 57777887763 23455566788999999999999988764 58999999
Q ss_pred cCccccceeeehhhhccccccCCCCCeEEEecCCCCCCeEEEEEcCC---EEEEEecccceEEEEeccCCCeeEEEEeec
Q psy710 282 ESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKLLLAYETG---LVVHWDLKLKRAEFRWQCSEPIKSVCWHYE 358 (591)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg---~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~ 358 (591)
.+++.. .+..+. .+.+++|+| ++++|++++.++ .|++||+.++.......+...|.+++|+|.
T Consensus 343 ~~~~~~------------~l~~~~-~~~~~~~sp-dg~~l~~~s~~~~~~~l~~~d~~g~~~~~l~~~~~~v~~~~~~~~ 408 (415)
T 2hqs_A 343 ATGGVQ------------VLSSTF-LDETPSLAP-NGTMVIYSSSQGMGSVLNLVSTDGRFKARLPATDGQVKFPAWSPY 408 (415)
T ss_dssp TTCCEE------------ECCCSS-SCEEEEECT-TSSEEEEEEEETTEEEEEEEETTSCCEEECCCSSSEEEEEEECCC
T ss_pred CCCCEE------------EecCCC-CcCCeEEcC-CCCEEEEEEcCCCccEEEEEECCCCcEEEeeCCCCCCcCCccccc
Confidence 987652 233443 899999999 999999988776 899999987777666668899999999996
Q ss_pred CC
Q psy710 359 GK 360 (591)
Q Consensus 359 g~ 360 (591)
..
T Consensus 409 ~~ 410 (415)
T 2hqs_A 409 LH 410 (415)
T ss_dssp CC
T ss_pred cc
Confidence 53
No 131
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.97 E-value=7.9e-29 Score=265.64 Aligned_cols=336 Identities=10% Similarity=0.046 Sum_probs=242.9
Q ss_pred CCCCcEEEeCCCCcEEEEEeC-CC-----cEEEEcCCCc-eeEeeccCC------------------------cceEEEE
Q psy710 7 PYQPTAIAFDPIQKLLAIGTK-TG-----SLRLLGRPGV-DAHVRHETD------------------------AAVIQMQ 55 (591)
Q Consensus 7 ~~~v~~~~~spdg~~la~g~~-dg-----~i~lw~~~~~-~~~~~~~h~------------------------~~v~~l~ 55 (591)
...|.+++|||||++||+++. |+ .|++||+.+. ....+..+. ..|.+++
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ 115 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence 456899999999999999988 88 8999998844 334443332 2388999
Q ss_pred EeecCCEEEEecCCCeEEEEeecccCceeeeEEEeeccceEEEEeeCCceEEEEEeCCCcEEEEEeeeeeeeceeccccc
Q psy710 56 FLTNEGALITATADDSLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNK 135 (591)
Q Consensus 56 ~sp~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~ 135 (591)
|||||++|++++. +.|.+||+.++.......+..+...+..++|+|||++|++++. +.|++||+.+++..........
T Consensus 116 ~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~-~~i~~~d~~~g~~~~~~~~~~~ 193 (741)
T 2ecf_A 116 WSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRG-RNLWVIDLASGRQMQLTADGST 193 (741)
T ss_dssp ECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEET-TEEEEEETTTTEEEECCCCCCS
T ss_pred ECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeC-CcEEEEecCCCCEEEeccCCcc
Confidence 9999999999876 9999999988710024456667788999999999999999875 6899999988765543321110
Q ss_pred ccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCCCCEEEEEeCCC--------------------------
Q psy710 136 AIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTKTG-------------------------- 189 (591)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-------------------------- 189 (591)
.+ .... ... ........+..++|+|||+.|++++.++
T Consensus 194 ~~----------~~g~----~~~---v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~ 256 (741)
T 2ecf_A 194 TI----------GNGI----AEF---VADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAA 256 (741)
T ss_dssp SE----------EESC----CCH---HHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBT
T ss_pred ce----------eccc----cce---eeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCC
Confidence 00 0000 000 0000012257899999999999887765
Q ss_pred -------cEEEeCCCC-eEEEEec---cCCCcEEEEEEEcCCceEEEEeC-----CCcEEEEEccCCCcceEEeeeeccc
Q psy710 190 -------SLRLLGRPG-VDAHVRH---ETDAAVIQMQFLTNEGALITATA-----DDSLHLWNFRQKRPEIVHSLKFQRE 253 (591)
Q Consensus 190 -------~i~i~d~~~-~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~-----d~~i~~wd~~~~~~~~~~~~~~~~~ 253 (591)
.|++||+.+ .+..... .+...+..++| |||++|++++. +..|++||+.++ +....+..+..
T Consensus 257 g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g--~~~~~~~~~~~ 333 (741)
T 2ecf_A 257 GDANVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASN--QQRVLAHETSP 333 (741)
T ss_dssp TSCCCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTC--CEEEEEEEECS
T ss_pred CCCCCeeEEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCC--ceEEEEEcCCC
Confidence 788999887 6654433 34568999999 99999987754 567999999988 45555554432
Q ss_pred ----cEEEEEecCCCCEEEEEeCCccEEEEEccC-ccccceeeehhhhccccccCCCCCeEEE-ecCCCCCCeEEEEE-c
Q psy710 254 ----RITYIHLPLQSKWLYVGTEKGNIHVVNIES-FTLSGYIINWNKAIDVCMKTHPGPIIHL-SDNPLDPSKLLLAY-E 326 (591)
Q Consensus 254 ----~v~~~~~sp~~~~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~sp~~~~~l~~~~-~ 326 (591)
.+..++|+|||+++++++.||.+++|.+.. ++. ..+..|...+..+ .|+| +++.|+..+ .
T Consensus 334 ~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~~~~~~~------------~~l~~~~~~v~~~~~~s~-dg~~l~~~~~~ 400 (741)
T 2ecf_A 334 TWVPLHNSLRFLDDGSILWSSERTGFQHLYRIDSKGKA------------AALTHGNWSVDELLAVDE-KAGLAYFRAGI 400 (741)
T ss_dssp SCCCCCSCCEECTTSCEEEEECTTSSCEEEEECSSSCE------------EESCCSSSCEEEEEEEET-TTTEEEEEECS
T ss_pred CcCCcCCceEECCCCeEEEEecCCCccEEEEEcCCCCe------------eeeeecceEEEeEeEEeC-CCCEEEEEEeC
Confidence 346889999999999999999888887652 221 1455667778887 5999 998776644 4
Q ss_pred CC--EEEEEeccc-ceEEEEeccCCCeeEEEEeecCCEEEEEecC----CcEEEEecC
Q psy710 327 TG--LVVHWDLKL-KRAEFRWQCSEPIKSVCWHYEGKQFLCSHTD----GTISTWAVR 377 (591)
Q Consensus 327 dg--~i~iwd~~~-~~~~~~~~~~~~v~~~~~sp~g~~l~s~~~d----g~i~vwd~~ 377 (591)
++ .++||++.. +.....+.....+.+++|+|||++|+....+ ..+.+|+..
T Consensus 401 ~~~~~~~l~~~~~~g~~~~~l~~~~~~~~~~~spdg~~l~~~~~~~~~p~~~~l~~~~ 458 (741)
T 2ecf_A 401 ESARESQIYAVPLQGGQPQRLSKAPGMHSASFARNASVYVDSWSNNSTPPQIELFRAN 458 (741)
T ss_dssp SCTTCBEEEEEETTCCCCEECCCSCSEEEEEECTTSSEEEEEEEETTEEEEEEEEETT
T ss_pred CCCceEEEEEEEcCCCCeeecccCCCceEEEECCCCCEEEEEecCCCCCCeEEEEEcC
Confidence 54 899999874 5545555557778999999999998876544 468899876
No 132
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.96 E-value=3.3e-28 Score=260.16 Aligned_cols=357 Identities=9% Similarity=0.036 Sum_probs=237.9
Q ss_pred CCCCCcEEEeCCCCcEEEEEeCCCcEEEEcCC-CceeEeeccCCc---ceEEEEEeecCCEEEEecCC---------CeE
Q psy710 6 FPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRP-GVDAHVRHETDA---AVIQMQFLTNEGALITATAD---------DSL 72 (591)
Q Consensus 6 h~~~v~~~~~spdg~~la~g~~dg~i~lw~~~-~~~~~~~~~h~~---~v~~l~~sp~~~~l~s~~~d---------~~i 72 (591)
....+.+++|+|||+++++ +.||+|++||+. +.....+..|.. .|.+++|||||++|++++.+ +.+
T Consensus 15 ~~~~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i 93 (723)
T 1xfd_A 15 FKIHDPEAKWISDTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYY 93 (723)
T ss_dssp TCCCCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEE
T ss_pred CcccccccEEcCCCcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeE
Confidence 3345788999999998876 789999999988 445555666654 49999999999999998764 788
Q ss_pred EEEeecccCceeeeEEEeeccceEEEEeeCCceEEEEEeCCCcEEEEEeeeeeeeceecccccccccCCCCCCCceeccC
Q psy710 73 HLWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLS 152 (591)
Q Consensus 73 ~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (591)
.+||+.+++...+.....|...+..++|+|||+.|+.++. +.|++||+.+++...........+ ......
T Consensus 94 ~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~---------~~~g~~ 163 (723)
T 1xfd_A 94 VLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGV---------IYNGLS 163 (723)
T ss_dssp EEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTT---------EEEEEC
T ss_pred EEEECCCCceEeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCc---------eECccc
Confidence 8999998863333333344455889999999999999886 799999998876554433111000 000000
Q ss_pred CCCcCcceeeeccCCCCceEEEECCCCCEEEEEeCC-CcEEEeCCCCeEEEEeccCCCcEEEEEEEcCCceEEEEeCCCc
Q psy710 153 DNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTKT-GSLRLLGRPGVDAHVRHETDAAVIQMQFLTNEGALITATADDS 231 (591)
Q Consensus 153 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-g~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~ 231 (591)
.. .........+.+++|+|||+.|++++.+ +.+.+|++.... ......+..+.|.++|.. ..+..
T Consensus 164 ----~~--v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~G~~----~~~~~ 229 (723)
T 1xfd_A 164 ----DW--LYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYT----GSIYPTVKPYHYPKAGSE----NPSIS 229 (723)
T ss_dssp ----CH--HHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCS----SSSSCCCEEEECCBTTSC----CCEEE
T ss_pred ----ce--eEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccC----CcCCCcceeccCCCCCCC----CCeeE
Confidence 00 0000001234799999999999887754 456666543211 011235788888887753 33458
Q ss_pred EEEEEccCCCcceEEeeeec------cccEEEEEecCCCCEEEEEeC----CccEEEEEccCccccceeeehhhhccccc
Q psy710 232 LHLWNFRQKRPEIVHSLKFQ------RERITYIHLPLQSKWLYVGTE----KGNIHVVNIESFTLSGYIINWNKAIDVCM 301 (591)
Q Consensus 232 i~~wd~~~~~~~~~~~~~~~------~~~v~~~~~sp~~~~l~~~~~----dg~i~i~d~~~~~~~~~~~~~~~~~~~~~ 301 (591)
|++||+.++ +....+..+ ...+..++|+|||+++++.+. +..|++||+.+++... ...
T Consensus 230 l~~~d~~~~--~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~----------~~~ 297 (723)
T 1xfd_A 230 LHVIGLNGP--THDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTK----------KHE 297 (723)
T ss_dssp EEEEESSSS--CCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEE----------EEE
T ss_pred EEEEECCCC--ceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceE----------EEE
Confidence 999999887 333444433 567899999999998876643 3579999998876531 011
Q ss_pred cCCCCCe----EEEecCCCCCCeEEEE--EcCC------EEEEEe-cccce---EEEEeccCCCeeE-EEEeecCCEEEE
Q psy710 302 KTHPGPI----IHLSDNPLDPSKLLLA--YETG------LVVHWD-LKLKR---AEFRWQCSEPIKS-VCWHYEGKQFLC 364 (591)
Q Consensus 302 ~~~~~~v----~~~~~sp~~~~~l~~~--~~dg------~i~iwd-~~~~~---~~~~~~~~~~v~~-~~~sp~g~~l~s 364 (591)
..+...+ ..++|+| |++.|+.. ..++ .|++|| ..+++ ......+...+.. ++|+|||+.|+.
T Consensus 298 ~~~~~~~~~~~~~~~~sp-dg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~ 376 (723)
T 1xfd_A 298 DESEAWLHRQNEEPVFSK-DGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYF 376 (723)
T ss_dssp EECSSCCCCCCCCCEECT-TSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEE
T ss_pred eccCCEEeccCCCceEcC-CCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcCCCCEEEE
Confidence 1223333 3789999 99987764 4566 577777 45554 3333233445554 699999999987
Q ss_pred EecC---CcEEEEecCCCCC-ceeeecc---cccccCCCCCCCCCcceEEEEee
Q psy710 365 SHTD---GTISTWAVRPLAK-PVSVNQP---HIKTNKDGKLEQCKPIQKVEWKH 411 (591)
Q Consensus 365 ~~~d---g~i~vwd~~~~~~-~~~~~~~---~~~~~~~~~~~~~~~i~~~~~~~ 411 (591)
.+.+ +.+++|++...+. ....+.. | ...+..++|+|
T Consensus 377 ~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~-----------~~~~~~~~~sp 419 (723)
T 1xfd_A 377 LSTEDLPRRRQLYSANTVGNFNRQCLSCDLVE-----------NCTYFSASFSH 419 (723)
T ss_dssp EESSSCTTCCEEEEECSSTTCCCBCSSTTSSS-----------SCCCCEEEECT
T ss_pred EEcCCCCcceEEEEEeCCCCCCcceecccccC-----------CCCeEEEEECC
Confidence 6655 7899999984443 3333432 3 46688999987
No 133
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.96 E-value=7.8e-27 Score=214.70 Aligned_cols=272 Identities=15% Similarity=0.090 Sum_probs=199.2
Q ss_pred ceEEEEEeecCC---EEEEecCCCeEEEEeecccC-ceeeeEEEeeccceEEEEeeCCceEEEEEeCCCcEEEEEeeeee
Q psy710 50 AVIQMQFLTNEG---ALITATADDSLHLWNFRQKR-PEIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFT 125 (591)
Q Consensus 50 ~v~~l~~sp~~~---~l~s~~~d~~i~vw~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~ 125 (591)
.+.++.|-..+- .++++++ ..|++|+..++. .+.+++..+|+.+|..+.+.||..-|++..- |. +
T Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~-~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-~~-----~---- 109 (356)
T 2w18_A 41 DVSAMFWERAGCKEPCIITACE-DVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVAL-GN-----L---- 109 (356)
T ss_dssp EEEEEEEC----CEEEEEEEES-SEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEEEEE-CS-----S----
T ss_pred EEeeeeeccCCCCccEEEEecc-ceEEEcccCCCccceeeEEEeccCceeEEEEEcCcccceeeeee-cc-----c----
Confidence 345566654442 5677765 899999998862 2578899999999999999998765554332 11 1
Q ss_pred eeceecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCC----CCEEEEEeCCCcEEEeCCCCeEE
Q psy710 126 LSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPI----QKLLAIGTKTGSLRLLGRPGVDA 201 (591)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~----~~~l~~~~~dg~i~i~d~~~~~~ 201 (591)
+...|..++++|+ ++.++.++.+ +.+|++
T Consensus 110 ----------------------------------------~~~~v~sla~spd~~~~~~~l~s~g~~--~~v~~l----- 142 (356)
T 2w18_A 110 ----------------------------------------EIREIRALFCSSDDESEKQVLLKSGNI--KAVLGL----- 142 (356)
T ss_dssp ----------------------------------------SEEEEEEECC------CCEEEEEEEEE--EEEEEE-----
T ss_pred ----------------------------------------cccceEEEEECCCccccccEEEeCCCe--EEEEec-----
Confidence 2244789999999 8899987744 555632
Q ss_pred EEeccCCCcEEEEEEEcCCceEEEEe--CCCcEEEEEccC-CCcceEEeeeeccccEEEEEecC---CCCEEEEEeCCcc
Q psy710 202 HVRHETDAAVIQMQFLTNEGALITAT--ADDSLHLWNFRQ-KRPEIVHSLKFQRERITYIHLPL---QSKWLYVGTEKGN 275 (591)
Q Consensus 202 ~~~~~~~~~v~~~~~~~~~~~l~~~~--~d~~i~~wd~~~-~~~~~~~~~~~~~~~v~~~~~sp---~~~~l~~~~~dg~ 275 (591)
++++.+.++. .|+.|++|++.. + +.+..+.+|...+..++|+| ++.+|++++.|++
T Consensus 143 ----------------~~g~lv~ss~~g~d~~V~~~~~s~dG--~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~T 204 (356)
T 2w18_A 143 ----------------TKRRLVSSSGTLSDQQVEVMTFAEDG--GGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNN 204 (356)
T ss_dssp ----------------TTTEEEEEESSSTTCEEEEEEECTTS--CEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSE
T ss_pred ----------------CCCcEEEecccCCCCcEEEEEECCCC--ceeeeeccCCCceeeEEeeccCCCCceEEEecCCCc
Confidence 3555555543 589999999954 4 67788889989999999999 7899999999999
Q ss_pred EEEEEccCccccceeeehhhhccccccCCC---CCeEEEecCCCCCCeE------------EEEEcCCEEEEEecccceE
Q psy710 276 IHVVNIESFTLSGYIINWNKAIDVCMKTHP---GPIIHLSDNPLDPSKL------------LLAYETGLVVHWDLKLKRA 340 (591)
Q Consensus 276 i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~---~~v~~~~~sp~~~~~l------------~~~~~dg~i~iwd~~~~~~ 340 (591)
|++||+++++.. ..+.+|. ..+.+++|+| ++.++ ++|+.|++|++||..+++.
T Consensus 205 IkIWDl~TGk~l-----------~tL~g~~~~v~~v~~vafSp-dG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~ 272 (356)
T 2w18_A 205 IVIWNLKTGQLL-----------KKMHIDDSYQASVCHKAYSE-MGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLS 272 (356)
T ss_dssp EEEEETTTCCEE-----------EEEECCC---CCCEEEEEEE-TTEEEEEEC------------CCEEEEEEETTTTEE
T ss_pred EEEEECCCCcEE-----------EEEcCCCcceeeeEEEEECC-CCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEE
Confidence 999999998873 2444433 4677889999 98876 5678899999999999988
Q ss_pred EEEe------ccCCCeeEEEEeecCCEEEEEecCCcEEEEecCCCCCceeeecccccccCCCCCCCCCcc-eEEEEeecC
Q psy710 341 EFRW------QCSEPIKSVCWHYEGKQFLCSHTDGTISTWAVRPLAKPVSVNQPHIKTNKDGKLEQCKPI-QKVEWKHSR 413 (591)
Q Consensus 341 ~~~~------~~~~~v~~~~~sp~g~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~~~~ 413 (591)
+..+ .|...+.+. +.++.++|+++.|++|+|||+. ++++++++.+| ...+ ..++|+|
T Consensus 273 l~v~~~~~p~Gh~~~~lsg--~~sg~~lASgS~DgTIkIWDl~-tGk~l~tL~gH-----------~~~vvs~vafSP-- 336 (356)
T 2w18_A 273 VGVMLYCLPPGQAGRFLEG--DVKDHCAAAILTSGTIAIWDLL-LGQCTALLPPV-----------SDQHWSFVKWSG-- 336 (356)
T ss_dssp EEEEEECCCTTCCCCEEEE--EEETTEEEEEETTSCEEEEETT-TCSEEEEECCC-------------CCCCEEEECS--
T ss_pred EEEEEeeccCCCcceeEcc--ccCCCEEEEEcCCCcEEEEECC-CCcEEEEecCC-----------CCCeEEEEEECC--
Confidence 7665 244444433 4458899999999999999999 89999999998 5554 4689998
Q ss_pred CCCcEEEEECCccC
Q psy710 414 SGEGFVIFSGGLTY 427 (591)
Q Consensus 414 ~~~~~~l~~g~~~~ 427 (591)
++.+|++|+.|.
T Consensus 337 --DG~~LaSGS~D~ 348 (356)
T 2w18_A 337 --TDSHLLAGQKDG 348 (356)
T ss_dssp --SSSEEEEECTTS
T ss_pred --CCCEEEEEECCC
Confidence 667899998764
No 134
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.96 E-value=1.8e-26 Score=234.94 Aligned_cols=300 Identities=10% Similarity=0.058 Sum_probs=224.8
Q ss_pred CcEEEeCCCCcEEEEEeCCCcEEEEcC--C-CceeEeeccCCcceEEEEEee----cCCEEEEecC-CCeEEEEeecccC
Q psy710 10 PTAIAFDPIQKLLAIGTKTGSLRLLGR--P-GVDAHVRHETDAAVIQMQFLT----NEGALITATA-DDSLHLWNFRQKR 81 (591)
Q Consensus 10 v~~~~~spdg~~la~g~~dg~i~lw~~--~-~~~~~~~~~h~~~v~~l~~sp----~~~~l~s~~~-d~~i~vw~~~~~~ 81 (591)
+..++|+|||++|++++.|+.|.+||+ . +..+..+. +...+..++|+| ||++|++++. +++|.+||..+++
T Consensus 181 ~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~-~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~ 259 (543)
T 1nir_A 181 VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIK-IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLE 259 (543)
T ss_dssp EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEE-CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCC
T ss_pred cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEe-cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccc
Confidence 789999999999999999999999999 5 45555665 455689999999 9999998885 8999999998875
Q ss_pred ceeeeEEEe----------ecc-ceEEEEeeCCceE-EEEEeCCCcEEEEEeeeeeeeceecccccccccCCCCCCCcee
Q psy710 82 PEIVHSLKF----------QRE-RITYIHLPLQSKW-LYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPII 149 (591)
Q Consensus 82 ~~~~~~~~~----------~~~-~v~~~~~~~~~~~-l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (591)
++..+.. |.+ .+.++.++|+++. +++...++.|.+||..+.+.....
T Consensus 260 --~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~------------------- 318 (543)
T 1nir_A 260 --PKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVT------------------- 318 (543)
T ss_dssp --EEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEE-------------------
T ss_pred --cceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeE-------------------
Confidence 5555543 333 7899999997655 555566899999999874422210
Q ss_pred ccCCCCcCcceeeeccCCCCceEEEECCCCCEEEEEe-CCCcEEEeCCCCeEEEEecc-----CCCcEEEEEEEcC-Cce
Q psy710 150 HLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGT-KTGSLRLLGRPGVDAHVRHE-----TDAAVIQMQFLTN-EGA 222 (591)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~-----~~~~v~~~~~~~~-~~~ 222 (591)
. ..+...+..++|+|++++++++. .+++|.+||..++++..... |......+ ++|+ +..
T Consensus 319 -----------~--i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~-~~p~~g~~ 384 (543)
T 1nir_A 319 -----------S--IGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF-VHPKYGPV 384 (543)
T ss_dssp -----------E--EECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEE-EETTTEEE
T ss_pred -----------E--eccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCccc-CCCCCccE
Confidence 0 11234567899999999876655 58999999999887765433 22222233 4777 555
Q ss_pred EEEEe-CCCcEEEEEccCCC-----cceEEeeeeccccEEEEEecCCCCEEEEEe-------CCccEEEEEccCccccce
Q psy710 223 LITAT-ADDSLHLWNFRQKR-----PEIVHSLKFQRERITYIHLPLQSKWLYVGT-------EKGNIHVVNIESFTLSGY 289 (591)
Q Consensus 223 l~~~~-~d~~i~~wd~~~~~-----~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~-------~dg~i~i~d~~~~~~~~~ 289 (591)
++++. .|++|.+||+.+.. .+.++.+..|...+..++++|++++|++++ .+++|.+||+.+.+....
T Consensus 385 ~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~ 464 (543)
T 1nir_A 385 WSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQ 464 (543)
T ss_dssp EEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCE
T ss_pred EEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeE
Confidence 56654 57999999998721 378999999888888999999999999987 267999999998876311
Q ss_pred eeehhhhccccccCCCCCeEEEecCCCCCCeEEEEE-----cCCEEEEEecccceEEEEeccCC
Q psy710 290 IINWNKAIDVCMKTHPGPIIHLSDNPLDPSKLLLAY-----ETGLVVHWDLKLKRAEFRWQCSE 348 (591)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~-----~dg~i~iwd~~~~~~~~~~~~~~ 348 (591)
.+.... ..-+..+...+..++|+| +|+.++++. .|+.|.|||..++++...+....
T Consensus 465 ~~~v~~--~~~~~~~~~~~~~~~~~~-~g~~~~~s~~~~~~~~~~i~v~D~~t~~~~~~i~~~~ 525 (543)
T 1nir_A 465 VLPIAE--WADLGEGAKRVVQPEYNK-RGDEVWFSVWNGKNDSSALVVVDDKTLKLKAVVKDPR 525 (543)
T ss_dssp EECHHH--HHCCCSSCCEEEEEEECS-SSSEEEEEEECCTTSCCEEEEEETTTTEEEEEECCTT
T ss_pred Eeechh--hcccCCCCCceEeccCCC-CCCEEEEEeecCCCCCCeEEEEECCCceEEEeecCCC
Confidence 111000 001345678899999999 999988763 47999999999999998887433
No 135
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.95 E-value=1.3e-26 Score=247.07 Aligned_cols=328 Identities=8% Similarity=0.056 Sum_probs=231.4
Q ss_pred CCcEEEeCCCCcEEEEEeCCCcEEEEcCCCcee--EeeccCC-----------------cceEEEEEeecCCEEEEecCC
Q psy710 9 QPTAIAFDPIQKLLAIGTKTGSLRLLGRPGVDA--HVRHETD-----------------AAVIQMQFLTNEGALITATAD 69 (591)
Q Consensus 9 ~v~~~~~spdg~~la~g~~dg~i~lw~~~~~~~--~~~~~h~-----------------~~v~~l~~sp~~~~l~s~~~d 69 (591)
.+..+.|+ |+.+++++.++ | +||+...+. ..+..|. ..|.+++|+|| +.++.+ .+
T Consensus 27 ~~~~~~w~--g~~~~~~~~~~-i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~~~~~~-~~ 100 (706)
T 2z3z_A 27 YVVGLQWM--GDNYVFIEGDD-L-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGR-GLVVLF-TQ 100 (706)
T ss_dssp -CTTCEEE--TTEEEEEETTE-E-EEEC-------CEEEEHHHHHTTC-----------CCCEEEEETTT-TEEEEE-ET
T ss_pred cCCCCcCc--CCeEEEEeCCc-E-EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeEEECCC-CeEEEE-EC
Confidence 45667888 56677777787 8 999874333 4444433 46999999999 666655 35
Q ss_pred CeEEEEeecccCceeeeEEEeeccceEEEEeeCCceEEEEEeCCCcEEEEEeee-----eeeeceecccccccccCCCCC
Q psy710 70 DSLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIES-----FTLSGYIINWNKAIDVCMKTH 144 (591)
Q Consensus 70 ~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~-----~~~~~~~~~~~~~~~~~~~~~ 144 (591)
+.|++||+.+++ ...+..+...+.+++|+|||+.|+++ .++.|++|++.+ ++...........+
T Consensus 101 ~~i~~~d~~~~~---~~~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~------- 169 (706)
T 2z3z_A 101 GGLVGFDMLARK---VTYLFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETL------- 169 (706)
T ss_dssp TEEEEEETTTTE---EEEEECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTE-------
T ss_pred CEEEEEECCCCc---eEEccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCe-------
Confidence 999999998773 34455566778899999999999985 679999999988 66543322111100
Q ss_pred CCceeccCCCCcCcceeeeccCCCCceEEEECCCCCEEEEEe---------------------------------CCCcE
Q psy710 145 PGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGT---------------------------------KTGSL 191 (591)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---------------------------------~dg~i 191 (591)
..... .. ..+...+.+++|+|||++|++++ .+..|
T Consensus 170 ---~~g~~--------~~-~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l 237 (706)
T 2z3z_A 170 ---VYGQA--------VH-QREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTV 237 (706)
T ss_dssp ---EESSC--------CG-GGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEE
T ss_pred ---Ecccc--------hh-hhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEE
Confidence 00000 00 11123468999999999999987 44679
Q ss_pred EEeCCCCeEEEEec---cCCCcEEEEEEEcCCceEEEEeCCC-----cEEEEEccCCCcceEEeee--eccc---cEEEE
Q psy710 192 RLLGRPGVDAHVRH---ETDAAVIQMQFLTNEGALITATADD-----SLHLWNFRQKRPEIVHSLK--FQRE---RITYI 258 (591)
Q Consensus 192 ~i~d~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~d~-----~i~~wd~~~~~~~~~~~~~--~~~~---~v~~~ 258 (591)
++||+.+.+..... .+...+..++|+|||++|++++.++ .|++||+.++ +....+. .+.. .+..+
T Consensus 238 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g--~~~~~~~~~~~~~~~~~~~~~ 315 (706)
T 2z3z_A 238 GIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETG--RFVRTLFVETDKHYVEPLHPL 315 (706)
T ss_dssp EEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTC--CEEEEEEEEECSSCCCCCSCC
T ss_pred EEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCC--ceeeEEEEccCCCeECccCCc
Confidence 99999888765443 3346799999999999999887765 8999999887 2333222 1222 23578
Q ss_pred EecC--CCCEEEEEeCCccEEEEEcc-CccccceeeehhhhccccccCCCCCeEE-EecCCCCCCeEEEEEc-CC----E
Q psy710 259 HLPL--QSKWLYVGTEKGNIHVVNIE-SFTLSGYIINWNKAIDVCMKTHPGPIIH-LSDNPLDPSKLLLAYE-TG----L 329 (591)
Q Consensus 259 ~~sp--~~~~l~~~~~dg~i~i~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~sp~~~~~l~~~~~-dg----~ 329 (591)
+|+| ||+++++++.|+.+++|.+. ++.. ...+..+...+.. ++|+| +++.|+.++. ++ .
T Consensus 316 ~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~-----------~~~l~~~~~~v~~~~~~sp-dg~~l~~~~~~~~~~~~~ 383 (706)
T 2z3z_A 316 TFLPGSNNQFIWQSRRDGWNHLYLYDTTGRL-----------IRQVTKGEWEVTNFAGFDP-KGTRLYFESTEASPLERH 383 (706)
T ss_dssp EECTTCSSEEEEEECTTSSCEEEEEETTSCE-----------EEECCCSSSCEEEEEEECT-TSSEEEEEESSSCTTCBE
T ss_pred eeecCCCCEEEEEEccCCccEEEEEECCCCE-----------EEecCCCCeEEEeeeEEcC-CCCEEEEEecCCCCceEE
Confidence 9999 99999999999999999876 3332 2245566777876 79999 9998877655 43 6
Q ss_pred EEEEecccceEEEEeccCCCeeEEEEeecCCEEEEEecC----CcEEEEecCCCCC
Q psy710 330 VVHWDLKLKRAEFRWQCSEPIKSVCWHYEGKQFLCSHTD----GTISTWAVRPLAK 381 (591)
Q Consensus 330 i~iwd~~~~~~~~~~~~~~~v~~~~~sp~g~~l~s~~~d----g~i~vwd~~~~~~ 381 (591)
|+.||+.+++ ...+.+...+.+++|+|||++|+....+ +.|++||+. +++
T Consensus 384 l~~~d~~~~~-~~~l~~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~-~~~ 437 (706)
T 2z3z_A 384 FYCIDIKGGK-TKDLTPESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIG-KGS 437 (706)
T ss_dssp EEEEETTCCC-CEESCCSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESS-SCE
T ss_pred EEEEEcCCCC-ceeccCCCceEEEEECCCCCEEEEEecCCCCCcEEEEEECC-CCe
Confidence 7777887776 3445577789999999999998877544 459999998 454
No 136
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.95 E-value=8e-27 Score=250.08 Aligned_cols=299 Identities=9% Similarity=0.018 Sum_probs=221.0
Q ss_pred CcceEEEEEeecCCEEEEecC-CC-----eEEEEeecccCceeeeEEEeec------------------------cceEE
Q psy710 48 DAAVIQMQFLTNEGALITATA-DD-----SLHLWNFRQKRPEIVHSLKFQR------------------------ERITY 97 (591)
Q Consensus 48 ~~~v~~l~~sp~~~~l~s~~~-d~-----~i~vw~~~~~~~~~~~~~~~~~------------------------~~v~~ 97 (591)
...+.+++|||||++|++++. |+ .|++||+.+++ ....+..+. ..+.+
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 113 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQ--TRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVD 113 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCC--EEEEECGGGTC--------------------CCEESCC
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCc--eeEccchhhcccccccccchhhhhhhhhhhccccCcce
Confidence 457999999999999999988 88 99999999885 333333332 23788
Q ss_pred EEeeCCceEEEEEeCCCcEEEEEeeee---eeeceecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEE
Q psy710 98 IHLPLQSKWLYVGTEKGNIHVVNIESF---TLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIA 174 (591)
Q Consensus 98 ~~~~~~~~~l~~~~~d~~i~vwd~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 174 (591)
++|+|||++|++++. +.|++||+.++ +... + ..+...+..++
T Consensus 114 ~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~-l---------------------------------~~~~~~~~~~~ 158 (741)
T 2ecf_A 114 YQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQ-L---------------------------------THGEGFATDAK 158 (741)
T ss_dssp CEECTTSSEEEEEET-TEEEEEESSSCSTTSCCB-C---------------------------------CCSSSCEEEEE
T ss_pred eEECCCCCEEEEEeC-CcEEEEECCCCCcceEEE-c---------------------------------ccCCccccccc
Confidence 999999999999887 99999999876 3221 1 12445689999
Q ss_pred ECCCCCEEEEEeCCCcEEEeCCCCeEEEEeccCCCc-----------------EEEEEEEcCCceEEEEeCCC-------
Q psy710 175 FDPIQKLLAIGTKTGSLRLLGRPGVDAHVRHETDAA-----------------VIQMQFLTNEGALITATADD------- 230 (591)
Q Consensus 175 ~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~-----------------v~~~~~~~~~~~l~~~~~d~------- 230 (591)
|+|||++|+.++ ++.|++||+.+++.......... +..+.|+|||++|++++.|+
T Consensus 159 ~SPDG~~la~~~-~~~i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~ 237 (741)
T 2ecf_A 159 LSPKGGFVSFIR-GRNLWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQK 237 (741)
T ss_dssp ECTTSSEEEEEE-TTEEEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEE
T ss_pred CCCCCCEEEEEe-CCcEEEEecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEe
Confidence 999999999887 46899999988776654332111 47899999999999987665
Q ss_pred --------------------------cEEEEEccC-CCcceEEeee--eccccEEEEEecCCCCEEEEEeC-----CccE
Q psy710 231 --------------------------SLHLWNFRQ-KRPEIVHSLK--FQRERITYIHLPLQSKWLYVGTE-----KGNI 276 (591)
Q Consensus 231 --------------------------~i~~wd~~~-~~~~~~~~~~--~~~~~v~~~~~sp~~~~l~~~~~-----dg~i 276 (591)
.|.+||+.+ ++ ...... .+...+..++| |||++|++++. +..|
T Consensus 238 ~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~--~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i 314 (741)
T 2ecf_A 238 RYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQ--TQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDL 314 (741)
T ss_dssp EEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCC--CEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEE
T ss_pred cCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCc--eEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEE
Confidence 788899987 74 332222 46678999999 99999987654 5689
Q ss_pred EEEEccCccccceeeehhhhccccccCCCC----CeEEEecCCCCCCeEEEEEcCCEEEEEecc-cceEEEEeccCCCee
Q psy710 277 HVVNIESFTLSGYIINWNKAIDVCMKTHPG----PIIHLSDNPLDPSKLLLAYETGLVVHWDLK-LKRAEFRWQCSEPIK 351 (591)
Q Consensus 277 ~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~----~v~~~~~sp~~~~~l~~~~~dg~i~iwd~~-~~~~~~~~~~~~~v~ 351 (591)
++||+.+++... ....+.. .+..++|+| |++++++++.|+.++||.+. .+.......+...+.
T Consensus 315 ~~~d~~~g~~~~-----------~~~~~~~~~~~~~~~~~~sp-dg~~~~~~~~~g~~~l~~~~~~~~~~~l~~~~~~v~ 382 (741)
T 2ecf_A 315 VEVTLASNQQRV-----------LAHETSPTWVPLHNSLRFLD-DGSILWSSERTGFQHLYRIDSKGKAAALTHGNWSVD 382 (741)
T ss_dssp EEEETTTCCEEE-----------EEEEECSSCCCCCSCCEECT-TSCEEEEECTTSSCEEEEECSSSCEEESCCSSSCEE
T ss_pred EEEECCCCceEE-----------EEEcCCCCcCCcCCceEECC-CCeEEEEecCCCccEEEEEcCCCCeeeeeecceEEE
Confidence 999999876531 2222221 345789999 99988888889977777665 333333334677788
Q ss_pred EE-EEeecCCEEEE-EecCC--cEEEEecCCCCCceeeecccccccCCCCCCCCCcceEEEEee
Q psy710 352 SV-CWHYEGKQFLC-SHTDG--TISTWAVRPLAKPVSVNQPHIKTNKDGKLEQCKPIQKVEWKH 411 (591)
Q Consensus 352 ~~-~~sp~g~~l~s-~~~dg--~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 411 (591)
.+ +|+|+|+.|+. ++.++ .++||++...+.....+... ..+..++|+|
T Consensus 383 ~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~g~~~~~l~~~------------~~~~~~~~sp 434 (741)
T 2ecf_A 383 ELLAVDEKAGLAYFRAGIESARESQIYAVPLQGGQPQRLSKA------------PGMHSASFAR 434 (741)
T ss_dssp EEEEEETTTTEEEEEECSSCTTCBEEEEEETTCCCCEECCCS------------CSEEEEEECT
T ss_pred eEeEEeCCCCEEEEEEeCCCCceEEEEEEEcCCCCeeecccC------------CCceEEEECC
Confidence 87 59999997765 44555 89999997546555555432 4578999987
No 137
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.95 E-value=3.2e-25 Score=214.44 Aligned_cols=294 Identities=14% Similarity=0.136 Sum_probs=206.8
Q ss_pred EEEEEeCCCcEEEEcCC--Cc-eeEeeccCCcceEEEEEeecCCEEEEecCC-CeEEEEeec--ccCceeeeEEEeeccc
Q psy710 21 LLAIGTKTGSLRLLGRP--GV-DAHVRHETDAAVIQMQFLTNEGALITATAD-DSLHLWNFR--QKRPEIVHSLKFQRER 94 (591)
Q Consensus 21 ~la~g~~dg~i~lw~~~--~~-~~~~~~~h~~~v~~l~~sp~~~~l~s~~~d-~~i~vw~~~--~~~~~~~~~~~~~~~~ 94 (591)
++++++.++.|++|++. +. .......|...+.+++|+|++++|++++.+ +.|.+|+++ +++...+..+..+. .
T Consensus 7 l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~ 85 (343)
T 1ri6_A 7 VYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-S 85 (343)
T ss_dssp EEEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-C
T ss_pred EEEeCCCCCeEEEEEECCCCcEEEeeeEecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-C
Confidence 44444779999999985 22 223334577889999999999998888876 999999998 55434455555443 7
Q ss_pred eEEEEeeCCceEEEEEeC-CCcEEEEEe---eeeeeeceecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCc
Q psy710 95 ITYIHLPLQSKWLYVGTE-KGNIHVVNI---ESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQP 170 (591)
Q Consensus 95 v~~~~~~~~~~~l~~~~~-d~~i~vwd~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 170 (591)
+..++|+|+++.+++++. ++.|.+||+ ...+....+. ....+
T Consensus 86 ~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~----------------------------------~~~~~ 131 (343)
T 1ri6_A 86 LTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVE----------------------------------GLDGC 131 (343)
T ss_dssp CSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEEC----------------------------------CCTTB
T ss_pred CcEEEEcCCCCEEEEEecCCCeEEEEECCCCcccccccccc----------------------------------CCCCc
Confidence 889999999998877765 788999999 4333333222 12347
Q ss_pred eEEEECCCCCEEEEEe-CCCcEEEeCCCC-eEEE------EeccCCCcEEEEEEEcCCceEEEEe-CCCcEEEEEccC--
Q psy710 171 TAIAFDPIQKLLAIGT-KTGSLRLLGRPG-VDAH------VRHETDAAVIQMQFLTNEGALITAT-ADDSLHLWNFRQ-- 239 (591)
Q Consensus 171 ~~~~~~~~~~~l~~~~-~dg~i~i~d~~~-~~~~------~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~~wd~~~-- 239 (591)
.+++|+|+++.+++++ .++.|++||+.. .+.. ........+..++|+|+++++++++ .++.|.+|++..
T Consensus 132 ~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~ 211 (343)
T 1ri6_A 132 HSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPH 211 (343)
T ss_dssp CCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTT
T ss_pred eEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCC
Confidence 8899999999888877 899999999876 4332 1222345788999999999776554 789999999964
Q ss_pred CCcceEEeeee---c---cccEEEEEecCCCCEEEEE-eCCccEEEEEccC--ccccceeeehhhhccccccCCCCCeEE
Q psy710 240 KRPEIVHSLKF---Q---RERITYIHLPLQSKWLYVG-TEKGNIHVVNIES--FTLSGYIINWNKAIDVCMKTHPGPIIH 310 (591)
Q Consensus 240 ~~~~~~~~~~~---~---~~~v~~~~~sp~~~~l~~~-~~dg~i~i~d~~~--~~~~~~~~~~~~~~~~~~~~~~~~v~~ 310 (591)
+.......+.. . ...+..++|+|++++|+++ ..++.|.+||+.. ++... ...+..+. .+..
T Consensus 212 g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~---------~~~~~~~~-~~~~ 281 (343)
T 1ri6_A 212 GNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSK---------EGFQPTET-QPRG 281 (343)
T ss_dssp SCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEE---------EEEEECSS-SCCC
T ss_pred CcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEE---------eeeecCCC-ccce
Confidence 32222333321 1 2356789999999988754 4789999999983 22210 11222233 3788
Q ss_pred EecCCCCCCeEEEEE-cCCEEEEEecc--cceEE--EEeccCCCeeEEEEeecCC
Q psy710 311 LSDNPLDPSKLLLAY-ETGLVVHWDLK--LKRAE--FRWQCSEPIKSVCWHYEGK 360 (591)
Q Consensus 311 ~~~sp~~~~~l~~~~-~dg~i~iwd~~--~~~~~--~~~~~~~~v~~~~~sp~g~ 360 (591)
++|+| ++++|++++ .++.|.+|++. +++.. ..+.......+++|.|+.+
T Consensus 282 ~~~s~-dg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~g~~p~~i~~~~~~~ 335 (343)
T 1ri6_A 282 FNVDH-SGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRYAVGQGPMWVVVNAHEG 335 (343)
T ss_dssp EEECT-TSSEEEEECTTTCEEEEEEEETTTTEEEEEEEEECSSSCCEEEEEEEC-
T ss_pred EEECC-CCCEEEEecCCCCeEEEEEEcCCCceeeEccccccCCCCeeEEEEcccC
Confidence 99999 999888887 58999999554 55443 3344446678888887654
No 138
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.95 E-value=1.5e-24 Score=209.76 Aligned_cols=276 Identities=12% Similarity=0.137 Sum_probs=194.3
Q ss_pred EEEecCCCeEEEEeecc-cCceeeeEEEeeccceEEEEeeCCceEEEEEeCC-CcEEEEEee--eeeeeceecccccccc
Q psy710 63 LITATADDSLHLWNFRQ-KRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEK-GNIHVVNIE--SFTLSGYIINWNKAID 138 (591)
Q Consensus 63 l~s~~~d~~i~vw~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-~~i~vwd~~--~~~~~~~~~~~~~~~~ 138 (591)
+++++.|+.|++|+++. ++...+.. ..+...+.+++|+|++++|++++.+ +.|.+|++. +++.....
T Consensus 8 ~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~-------- 78 (343)
T 1ri6_A 8 YIASPESQQIHVWNLNHEGALTLTQV-VDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAA-------- 78 (343)
T ss_dssp EEEEGGGTEEEEEEECTTSCEEEEEE-EECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEE--------
T ss_pred EEeCCCCCeEEEEEECCCCcEEEeee-EecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeecc--------
Confidence 44447899999999963 33223333 3466788999999999999988886 899999997 43322110
Q ss_pred cCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCCCCEEEEEeC-CCcEEEeCC---CCeEEEEeccCCCcEEEE
Q psy710 139 VCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTK-TGSLRLLGR---PGVDAHVRHETDAAVIQM 214 (591)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~i~d~---~~~~~~~~~~~~~~v~~~ 214 (591)
.+ .....+..++|+|+++++++++. ++.|.+||+ ...+..........+.++
T Consensus 79 ----------------------~~--~~~~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~ 134 (343)
T 1ri6_A 79 ----------------------ES--ALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSA 134 (343)
T ss_dssp ----------------------EE--ECSSCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCC
T ss_pred ----------------------cc--ccCCCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCCCCceEE
Confidence 01 11235789999999998877665 888999998 444444444445578999
Q ss_pred EEEcCCceEEEEe-CCCcEEEEEccC-CCcceEE--eeee-ccccEEEEEecCCCCEEEEEe-CCccEEEEEccC--ccc
Q psy710 215 QFLTNEGALITAT-ADDSLHLWNFRQ-KRPEIVH--SLKF-QRERITYIHLPLQSKWLYVGT-EKGNIHVVNIES--FTL 286 (591)
Q Consensus 215 ~~~~~~~~l~~~~-~d~~i~~wd~~~-~~~~~~~--~~~~-~~~~v~~~~~sp~~~~l~~~~-~dg~i~i~d~~~--~~~ 286 (591)
+|+|+++++++++ .++.|.+||+.+ ++..... .+.. ....+..++|+|+++++++++ .++.|.+|++.. ++.
T Consensus 135 ~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~ 214 (343)
T 1ri6_A 135 NISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNI 214 (343)
T ss_dssp EECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCC
T ss_pred EECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcE
Confidence 9999999888877 889999999987 5322222 2222 234688899999999776554 788999999954 322
Q ss_pred cceeeehhhhccccccC--CCCCeEEEecCCCCCCeEEEEE-cCCEEEEEecc--c--ceEEEEeccCCCeeEEEEeecC
Q psy710 287 SGYIINWNKAIDVCMKT--HPGPIIHLSDNPLDPSKLLLAY-ETGLVVHWDLK--L--KRAEFRWQCSEPIKSVCWHYEG 359 (591)
Q Consensus 287 ~~~~~~~~~~~~~~~~~--~~~~v~~~~~sp~~~~~l~~~~-~dg~i~iwd~~--~--~~~~~~~~~~~~v~~~~~sp~g 359 (591)
..... ......+ ....+..++|+| ++++|+++. .++.|++||+. + .+....+.....+..++|+|+|
T Consensus 215 ~~~~~-----~~~~~~~~~~~~~~~~i~~s~-dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~s~dg 288 (343)
T 1ri6_A 215 ECVQT-----LDMMPENFSDTRWAADIHITP-DGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSG 288 (343)
T ss_dssp EEEEE-----EECSCTTCCSCCCEEEEEECT-TSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSSCCCEEECTTS
T ss_pred EEEee-----ccccCccccccCCccceEECC-CCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCccceEEECCCC
Confidence 10000 0001111 134677899999 998887554 78999999998 3 3444445444458999999999
Q ss_pred CEEEEEe-cCCcEEEEecC
Q psy710 360 KQFLCSH-TDGTISTWAVR 377 (591)
Q Consensus 360 ~~l~s~~-~dg~i~vwd~~ 377 (591)
++|++++ .++.|.+|+++
T Consensus 289 ~~l~~~~~~~~~v~v~~~d 307 (343)
T 1ri6_A 289 KYLIAAGQKSHHISVYEIV 307 (343)
T ss_dssp SEEEEECTTTCEEEEEEEE
T ss_pred CEEEEecCCCCeEEEEEEc
Confidence 9888887 68999999776
No 139
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.94 E-value=4.5e-25 Score=235.10 Aligned_cols=316 Identities=9% Similarity=0.039 Sum_probs=222.7
Q ss_pred CCCcEEEeCCCCcEEEEEeCCCcEEEEcCCCceeEeeccCCcceEEEEEeecCCEEEEecCCCeEEEEeecc-----cCc
Q psy710 8 YQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGVDAHVRHETDAAVIQMQFLTNEGALITATADDSLHLWNFRQ-----KRP 82 (591)
Q Consensus 8 ~~v~~~~~spdg~~la~g~~dg~i~lw~~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~~~d~~i~vw~~~~-----~~~ 82 (591)
..|.+++|||| +.++.+ .++.|++||+.+.....+..+...+.+++|||||++|+++ .|+.|++|++.+ ++.
T Consensus 82 ~~v~~~~~spd-~~~~~~-~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~ 158 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLF-TQGGLVGFDMLARKVTYLFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRA 158 (706)
T ss_dssp CCCEEEEETTT-TEEEEE-ETTEEEEEETTTTEEEEEECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCC
T ss_pred cCceeEEECCC-CeEEEE-ECCEEEEEECCCCceEEccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCc
Confidence 57999999999 655555 3599999999877777777788889999999999999985 679999999998 652
Q ss_pred eeeeEEEeeccc--------------eEEEEeeCCceEEEEEe---------------------------------CCCc
Q psy710 83 EIVHSLKFQRER--------------ITYIHLPLQSKWLYVGT---------------------------------EKGN 115 (591)
Q Consensus 83 ~~~~~~~~~~~~--------------v~~~~~~~~~~~l~~~~---------------------------------~d~~ 115 (591)
......+... +.++.|+|||++|++++ .+..
T Consensus 159 --~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~ 236 (706)
T 2z3z_A 159 --IAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVT 236 (706)
T ss_dssp --EESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEE
T ss_pred --EEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeE
Confidence 2222222222 47899999999999987 3456
Q ss_pred EEEEEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCCCCEEEEEeCCC-----c
Q psy710 116 IHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTKTG-----S 190 (591)
Q Consensus 116 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-----~ 190 (591)
|++||+.+++....... ..+...+..++|+||++.|++++.++ .
T Consensus 237 l~~~d~~~~~~~~~~~~-------------------------------~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~ 285 (706)
T 2z3z_A 237 VGIYHLATGKTVYLQTG-------------------------------EPKEKFLTNLSWSPDENILYVAEVNRAQNECK 285 (706)
T ss_dssp EEEEETTTTEEEECCCC-------------------------------SCTTCEEEEEEECTTSSEEEEEEECTTSCEEE
T ss_pred EEEEECCCCceEeeccC-------------------------------CCCceeEeeEEEECCCCEEEEEEeCCCCCeeE
Confidence 88888776554322110 12445678999999999999887765 8
Q ss_pred EEEeCCCCe-EEEEec--cCC---CcEEEEEEEc--CCceEEEEeCCCcEEEEEcc-CCCcceEEeeeeccccEEE-EEe
Q psy710 191 LRLLGRPGV-DAHVRH--ETD---AAVIQMQFLT--NEGALITATADDSLHLWNFR-QKRPEIVHSLKFQRERITY-IHL 260 (591)
Q Consensus 191 i~i~d~~~~-~~~~~~--~~~---~~v~~~~~~~--~~~~l~~~~~d~~i~~wd~~-~~~~~~~~~~~~~~~~v~~-~~~ 260 (591)
|++||..++ ...... ... ..+..++|+| +|++++++..|+.+++|++. .+ ..+..+..+...+.. ++|
T Consensus 286 v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~--~~~~~l~~~~~~v~~~~~~ 363 (706)
T 2z3z_A 286 VNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTG--RLIRQVTKGEWEVTNFAGF 363 (706)
T ss_dssp EEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTS--CEEEECCCSSSCEEEEEEE
T ss_pred EEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCC--CEEEecCCCCeEEEeeeEE
Confidence 999999887 433222 121 1346789999 99999999999999999887 33 566777777677876 799
Q ss_pred cCCCCEEEEEeCC-c----cEEEEEccCccccceeeehhhhccccccCCCCCeEEEecCCCCCCeEEEEEcC----CEEE
Q psy710 261 PLQSKWLYVGTEK-G----NIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKLLLAYET----GLVV 331 (591)
Q Consensus 261 sp~~~~l~~~~~d-g----~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~d----g~i~ 331 (591)
+|+++.|+.++.+ + .|+.||+.+++.. . ..|...+.+++|+| |+++++..+.+ +.|+
T Consensus 364 spdg~~l~~~~~~~~~~~~~l~~~d~~~~~~~------------~-l~~~~~~~~~~~sp-dg~~l~~~~~~~~~p~~i~ 429 (706)
T 2z3z_A 364 DPKGTRLYFESTEASPLERHFYCIDIKGGKTK------------D-LTPESGMHRTQLSP-DGSAIIDIFQSPTVPRKVT 429 (706)
T ss_dssp CTTSSEEEEEESSSCTTCBEEEEEETTCCCCE------------E-SCCSSSEEEEEECT-TSSEEEEEEECSSCSCEEE
T ss_pred cCCCCEEEEEecCCCCceEEEEEEEcCCCCce------------e-ccCCCceEEEEECC-CCCEEEEEecCCCCCcEEE
Confidence 9999988765544 3 5666676665431 1 23566799999999 99988876543 5799
Q ss_pred EEecccceEEEEeccCCCeeEEEEeecCCEEEEEecCC--cEEEEecC
Q psy710 332 HWDLKLKRAEFRWQCSEPIKSVCWHYEGKQFLCSHTDG--TISTWAVR 377 (591)
Q Consensus 332 iwd~~~~~~~~~~~~~~~v~~~~~sp~g~~l~s~~~dg--~i~vwd~~ 377 (591)
+||+.+++ ...+.+...+....|.+.. .+-.-..|| .+..|-..
T Consensus 430 l~d~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~ 475 (706)
T 2z3z_A 430 VTNIGKGS-HTLLEAKNPDTGYAMPEIR-TGTIMAADGQTPLYYKLTM 475 (706)
T ss_dssp EEESSSCE-EEEEECC------CCCCEE-EEEEECTTSSSEEEEEEEC
T ss_pred EEECCCCe-EeeccccchhhhcCCCCcE-EEEEEcCCCCEEEEEEEEe
Confidence 99999887 5555555555544443332 233334455 45555543
No 140
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.94 E-value=1.2e-24 Score=209.84 Aligned_cols=280 Identities=11% Similarity=0.061 Sum_probs=212.6
Q ss_pred CEEEEecCCCeEEEEeecccCceeeeEEEeecc--ceEEEEeeCCceEEEE-EeCCCcEEEEEeeeeeeeceeccccccc
Q psy710 61 GALITATADDSLHLWNFRQKRPEIVHSLKFQRE--RITYIHLPLQSKWLYV-GTEKGNIHVVNIESFTLSGYIINWNKAI 137 (591)
Q Consensus 61 ~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~~-~~~d~~i~vwd~~~~~~~~~~~~~~~~~ 137 (591)
++|++++.++.|.+||+.+++ .+..+..... .+..++|+|+++.+++ +..++.|.+||+.+++....+.....
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~--~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~-- 77 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMA--VDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTP-- 77 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTE--EEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBT--
T ss_pred cEEEEcCCCCeEEEEECCCCc--EEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCc--
Confidence 478899999999999998873 5555553322 5788999999976654 45578999999988776554431000
Q ss_pred ccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCCCCEEEEEe------------CCCcEEEeCCCCeEEEEec
Q psy710 138 DVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGT------------KTGSLRLLGRPGVDAHVRH 205 (591)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~------------~dg~i~i~d~~~~~~~~~~ 205 (591)
..+...+..++|+|+++.++++. .++.|.+||..+.+.....
T Consensus 78 --------------------------~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~ 131 (337)
T 1pby_B 78 --------------------------EERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAF 131 (337)
T ss_dssp --------------------------TEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEE
T ss_pred --------------------------ccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEE
Confidence 00112467899999999988886 5799999999887776555
Q ss_pred cCCCcEEEEEEEcCCceEEEEeCCCcEEEEEccCCCcceEEeeeeccccEEEEEecCCCCEEEEEeCCc-----------
Q psy710 206 ETDAAVIQMQFLTNEGALITATADDSLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEKG----------- 274 (591)
Q Consensus 206 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg----------- 274 (591)
.....+..++|+|++++|+++ ++.|.+||+.++ +.+..+..+.. ...+.|+|+++.+++...++
T Consensus 132 ~~~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~--~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~ 206 (337)
T 1pby_B 132 EAPRQITMLAWARDGSKLYGL--GRDLHVMDPEAG--TLVEDKPIQSW-EAETYAQPDVLAVWNQHESSGVMATPFYTAR 206 (337)
T ss_dssp ECCSSCCCEEECTTSSCEEEE--SSSEEEEETTTT--EEEEEECSTTT-TTTTBCCCBCCCCCCCCTTTTEEEEEEEEEB
T ss_pred eCCCCcceeEECCCCCEEEEe--CCeEEEEECCCC--cEeeeeecccc-CCCceeCCCccEEeeeccCCCceeeeeeccc
Confidence 445578889999999988888 688999999987 56655554320 11337899998776554433
Q ss_pred -------------cEEEEEccCccccceeeehhhhccccccCCCCCeEEEecCCCCCCeEEEEEcCCEEEEEecccceEE
Q psy710 275 -------------NIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKLLLAYETGLVVHWDLKLKRAE 341 (591)
Q Consensus 275 -------------~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~iwd~~~~~~~ 341 (591)
.|.+||+.+++.. ...+..+...+.+++|+| ++++++++ ++.|++||+.+++..
T Consensus 207 ~~~~~~~~~~~~~~v~~~d~~~~~~~----------~~~~~~~~~~~~~~~~s~-dg~~l~~~--~~~v~~~d~~~~~~~ 273 (337)
T 1pby_B 207 KDIDPADPTAYRTGLLTMDLETGEMA----------MREVRIMDVFYFSTAVNP-AKTRAFGA--YNVLESFDLEKNASI 273 (337)
T ss_dssp TTSCTTSGGGEEEEEEEEETTTCCEE----------EEEEEECSSCEEEEEECT-TSSEEEEE--ESEEEEEETTTTEEE
T ss_pred cccccccccccccceEEEeCCCCCce----------EeecCCCCCceeeEEECC-CCCEEEEe--CCeEEEEECCCCcCc
Confidence 4688998887653 112344566788999999 99999888 699999999999988
Q ss_pred EEeccCCCeeEEEEeecCCEEEEEecCCcEEEEecCCCCCceeeeccc
Q psy710 342 FRWQCSEPIKSVCWHYEGKQFLCSHTDGTISTWAVRPLAKPVSVNQPH 389 (591)
Q Consensus 342 ~~~~~~~~v~~~~~sp~g~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~ 389 (591)
..+.....+.+++|+|+|++|++++.++.|++||+. +++.+..+..+
T Consensus 274 ~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~-~~~~~~~~~~~ 320 (337)
T 1pby_B 274 KRVPLPHSYYSVNVSTDGSTVWLGGALGDLAAYDAE-TLEKKGQVDLP 320 (337)
T ss_dssp EEEECSSCCCEEEECTTSCEEEEESBSSEEEEEETT-TCCEEEEEECG
T ss_pred ceecCCCceeeEEECCCCCEEEEEcCCCcEEEEECc-CCcEEEEEEcC
Confidence 888777788999999999999999999999999999 77777766554
No 141
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.94 E-value=4.3e-24 Score=205.42 Aligned_cols=288 Identities=11% Similarity=0.093 Sum_probs=201.3
Q ss_pred EEeCCCCc-EEEEEeCCCcEEEEcCC-CceeEeeccCCcceEEEEEeecCCEEEEecC-CCeEEEEeecccCceeeeEEE
Q psy710 13 IAFDPIQK-LLAIGTKTGSLRLLGRP-GVDAHVRHETDAAVIQMQFLTNEGALITATA-DDSLHLWNFRQKRPEIVHSLK 89 (591)
Q Consensus 13 ~~~spdg~-~la~g~~dg~i~lw~~~-~~~~~~~~~h~~~v~~l~~sp~~~~l~s~~~-d~~i~vw~~~~~~~~~~~~~~ 89 (591)
..|.++++ .+++++.++.|.+||.. ++....+..+...+ .++|+|+++++++++. ++.|.+||+.+++. ....+.
T Consensus 3 ~~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~-~~~~~~ 80 (331)
T 3u4y_A 3 AMFQTTSNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPP-KVVAIQ 80 (331)
T ss_dssp ----CCCCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSC-EEEEEE
T ss_pred eeEcCCCCEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCce-eEEecc
Confidence 34666554 46777889999999987 55555666666667 9999999997776655 88999999998852 255666
Q ss_pred eeccceEEEEeeCCceEEEEEeCCC---cEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCcceeeeccC
Q psy710 90 FQRERITYIHLPLQSKWLYVGTEKG---NIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGF 166 (591)
Q Consensus 90 ~~~~~v~~~~~~~~~~~l~~~~~d~---~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (591)
.+..+..+++|+|++++++++..++ .|.+||+.+++.+..+. .
T Consensus 81 ~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~----------------------------------~ 126 (331)
T 3u4y_A 81 EGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIP----------------------------------I 126 (331)
T ss_dssp ECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEE----------------------------------C
T ss_pred cCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEE----------------------------------C
Confidence 6666555599999999999655553 89999998877655443 1
Q ss_pred CCCceEEEECCCCCEEEE-EeCCCc-EEEeCCCCeEE-----EEeccCCCcEEEEEEEcCCceEEEE-eCCCcEEEEEcc
Q psy710 167 PYQPTAIAFDPIQKLLAI-GTKTGS-LRLLGRPGVDA-----HVRHETDAAVIQMQFLTNEGALITA-TADDSLHLWNFR 238 (591)
Q Consensus 167 ~~~v~~~~~~~~~~~l~~-~~~dg~-i~i~d~~~~~~-----~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~~wd~~ 238 (591)
...+.+++|+|+++++++ ...++. |.+|++..... ............++|+|+|++++++ ..++.|.+||+.
T Consensus 127 ~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~ 206 (331)
T 3u4y_A 127 PYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQ 206 (331)
T ss_dssp CTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECS
T ss_pred CCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECC
Confidence 234589999999985554 455688 99998764211 1222334568999999999966555 468899999998
Q ss_pred CCCc-ceEEeeeeccccEEEEEecCCCCEEEEEe-CCccEEEEEccCccccceeeehhhhccccccCCC---CCeEEEec
Q psy710 239 QKRP-EIVHSLKFQRERITYIHLPLQSKWLYVGT-EKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHP---GPIIHLSD 313 (591)
Q Consensus 239 ~~~~-~~~~~~~~~~~~v~~~~~sp~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~---~~v~~~~~ 313 (591)
+++. +.+..+..+ ..+..++|+|+|++++++. .++.|.+||+.+++..... .. ...+..+. .....++|
T Consensus 207 ~~~~~~~~~~~~~~-~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~-~~----~~~~~~~~~~~~~~~~~~~ 280 (331)
T 3u4y_A 207 NPENITLLNAVGTN-NLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTLSFVK-SF----GHGLLIDPRPLFGANQMAL 280 (331)
T ss_dssp STTSCEEEEEEECS-SCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEEEEEE-EE----ECCCCCCCGGGTTCCCEEE
T ss_pred CCcccceeeeccCC-CCCceEEECCCCCEEEEEEcCCCEEEEEECCCCceeeec-cc----ccccccCCCCcccccceEE
Confidence 8732 116666544 6678899999999887665 4678999999987662100 00 00101111 12256899
Q ss_pred CCCCCCeEEEEEc-CCEEEEEecccceEEEE
Q psy710 314 NPLDPSKLLLAYE-TGLVVHWDLKLKRAEFR 343 (591)
Q Consensus 314 sp~~~~~l~~~~~-dg~i~iwd~~~~~~~~~ 343 (591)
+| ++++|++++. ++.|.+||+........
T Consensus 281 sp-dg~~l~v~~~~~~~v~v~d~~~~~~~~~ 310 (331)
T 3u4y_A 281 NK-TETKLFISANISRELKVFTISGKVVGYV 310 (331)
T ss_dssp CT-TSSEEEEEETTTTEEEEEETTSCEEEEC
T ss_pred CC-CCCEEEEecCCCCcEEEEEecCCcccce
Confidence 99 9998877655 67999999988765543
No 142
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.94 E-value=9.9e-24 Score=202.85 Aligned_cols=277 Identities=7% Similarity=0.023 Sum_probs=196.5
Q ss_pred EEEeecCCE-EEEecCCCeEEEEeecccCceeeeEEEeeccceEEEEeeCCceEEEEEeC-CCcEEEEEeeeeee-ecee
Q psy710 54 MQFLTNEGA-LITATADDSLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGTE-KGNIHVVNIESFTL-SGYI 130 (591)
Q Consensus 54 l~~sp~~~~-l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~vwd~~~~~~-~~~~ 130 (591)
..|.+++++ +++.+.++.|.+||..+++ ....+..+...+ .++|+|+++.+++++. ++.|.+||+.+++. ...+
T Consensus 3 ~~~~~~~~~~~v~~~~~~~v~~~d~~~~~--~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~ 79 (331)
T 3u4y_A 3 AMFQTTSNFGIVVEQHLRRISFFSTDTLE--ILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAI 79 (331)
T ss_dssp ----CCCCEEEEEEGGGTEEEEEETTTCC--EEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEE
T ss_pred eeEcCCCCEEEEEecCCCeEEEEeCcccc--eeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEec
Confidence 346666655 6677889999999999885 455555555666 9999999997777666 88999999988664 3322
Q ss_pred cccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCCCCEEEEEeCCC---cEEEeCCCCeEEEEeccC
Q psy710 131 INWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTKTG---SLRLLGRPGVDAHVRHET 207 (591)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg---~i~i~d~~~~~~~~~~~~ 207 (591)
. .+.....+++|+|++++++++..++ .|.+||..+.+.......
T Consensus 80 ~---------------------------------~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~ 126 (331)
T 3u4y_A 80 Q---------------------------------EGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPI 126 (331)
T ss_dssp E---------------------------------ECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEEC
T ss_pred c---------------------------------cCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEEC
Confidence 2 1222333499999999998655553 899999998887766555
Q ss_pred CCcEEEEEEEcCCceEEEE-eCCCc-EEEEEccCCCcceE---EeeeeccccEEEEEecCCCCEEEEEe-CCccEEEEEc
Q psy710 208 DAAVIQMQFLTNEGALITA-TADDS-LHLWNFRQKRPEIV---HSLKFQRERITYIHLPLQSKWLYVGT-EKGNIHVVNI 281 (591)
Q Consensus 208 ~~~v~~~~~~~~~~~l~~~-~~d~~-i~~wd~~~~~~~~~---~~~~~~~~~v~~~~~sp~~~~l~~~~-~dg~i~i~d~ 281 (591)
......++|+|+|++++++ ..++. |.+|++.... ... .........+..++|+|+|+++++++ .++.|++||+
T Consensus 127 ~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~ 205 (331)
T 3u4y_A 127 PYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADG-VLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILET 205 (331)
T ss_dssp CTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTC-CEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEEC
T ss_pred CCCccceEECCCCCEEEEEecCCCceEEEEEECCCC-cEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEEC
Confidence 5678999999999866655 55588 9999998542 111 11112335688999999999765554 6889999999
Q ss_pred cCccccceeeehhhhccccccCCCCCeEEEecCCCCCCeEEEEE-cCCEEEEEecccceE--EEEecc-----C---CCe
Q psy710 282 ESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKLLLAY-ETGLVVHWDLKLKRA--EFRWQC-----S---EPI 350 (591)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~-~dg~i~iwd~~~~~~--~~~~~~-----~---~~v 350 (591)
.+++.... ...+. ....+..++|+| ++++++++. .++.|.+||+.++++ +..+.. . ...
T Consensus 206 ~~~~~~~~--------~~~~~-~~~~~~~~~~sp-dg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (331)
T 3u4y_A 206 QNPENITL--------LNAVG-TNNLPGTIVVSR-DGSTVYVLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGA 275 (331)
T ss_dssp SSTTSCEE--------EEEEE-CSSCCCCEEECT-TSSEEEEECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTC
T ss_pred CCCcccce--------eeecc-CCCCCceEEECC-CCCEEEEEEcCCCEEEEEECCCCceeeecccccccccCCCCcccc
Confidence 88765110 00122 235677899999 999777655 478899999999887 333221 1 123
Q ss_pred eEEEEeecCCEEEEEec-CCcEEEEecC
Q psy710 351 KSVCWHYEGKQFLCSHT-DGTISTWAVR 377 (591)
Q Consensus 351 ~~~~~sp~g~~l~s~~~-dg~i~vwd~~ 377 (591)
..++|+|||++|++++. ++.|.+||+.
T Consensus 276 ~~~~~spdg~~l~v~~~~~~~v~v~d~~ 303 (331)
T 3u4y_A 276 NQMALNKTETKLFISANISRELKVFTIS 303 (331)
T ss_dssp CCEEECTTSSEEEEEETTTTEEEEEETT
T ss_pred cceEECCCCCEEEEecCCCCcEEEEEec
Confidence 56899999998876654 5689999998
No 143
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.93 E-value=3.4e-24 Score=202.43 Aligned_cols=255 Identities=12% Similarity=0.143 Sum_probs=193.9
Q ss_pred EecCCCeEEEEeecccCceeeeEEEeeccceEEEEeeCCceEEEEEeCCCcEEEEEeee-eeeeceecccccccccCCCC
Q psy710 65 TATADDSLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIES-FTLSGYIINWNKAIDVCMKT 143 (591)
Q Consensus 65 s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~-~~~~~~~~~~~~~~~~~~~~ 143 (591)
..+.|++|++||+.+++ ...+..|...|.+++|+|++++|++++ ++.|++||+.+ ++......
T Consensus 17 ~~~~~~~i~~~d~~~~~---~~~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~------------ 80 (297)
T 2ojh_A 17 GGSMRSSIEIFNIRTRK---MRVVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDT------------ 80 (297)
T ss_dssp -CCCCEEEEEEETTTTE---EEEEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCC------------
T ss_pred CCCcceeEEEEeCCCCc---eeeeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEecc------------
Confidence 34678999999998874 345666889999999999999999986 78999999987 65443322
Q ss_pred CCCceeccCCCCcCcceeeeccCCCCceEEEECCCCCEEEEEeC--C--CcEEEeCCCCeEEEEeccCCCcEEEEEEEcC
Q psy710 144 HPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTK--T--GSLRLLGRPGVDAHVRHETDAAVIQMQFLTN 219 (591)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--d--g~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~ 219 (591)
......+.+++|+|++++|++++. + ..|..++..+........ ...+..++|+|+
T Consensus 81 --------------------~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~spd 139 (297)
T 2ojh_A 81 --------------------GFATICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGTPRLMTK-NLPSYWHGWSPD 139 (297)
T ss_dssp --------------------TTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCCCEECCS-SSSEEEEEECTT
T ss_pred --------------------ccccccccceEECCCCCEEEEEEeCCCCcceEEEEECCCCceEEeec-CCCccceEECCC
Confidence 112355788999999999999983 3 455555655555433333 235889999999
Q ss_pred CceEE-EEeCCCcEEEEEccCCCcceEEeeeeccccEEEEEecCCCCEEEEEe-CCccEEEEEccC-ccccceeeehhhh
Q psy710 220 EGALI-TATADDSLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGT-EKGNIHVVNIES-FTLSGYIINWNKA 296 (591)
Q Consensus 220 ~~~l~-~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~-~dg~i~i~d~~~-~~~~~~~~~~~~~ 296 (591)
+++|+ ++..++.+++|++.... .....+..+...+.+++|+|+++++++++ .++.+++|++.. ...
T Consensus 140 g~~l~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~---------- 208 (297)
T 2ojh_A 140 GKSFTYCGIRDQVFDIYSMDIDS-GVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSS---------- 208 (297)
T ss_dssp SSEEEEEEEETTEEEEEEEETTT-CCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSC----------
T ss_pred CCEEEEEECCCCceEEEEEECCC-CcceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCC----------
Confidence 99887 67788999999975432 23455666778899999999999888766 588999998863 222
Q ss_pred ccccccCCCCCeEEEecCCCCCCeEEEEEcC-----------CEEEEEecccceEEEEe---ccCCCeeEEEEeecCCEE
Q psy710 297 IDVCMKTHPGPIIHLSDNPLDPSKLLLAYET-----------GLVVHWDLKLKRAEFRW---QCSEPIKSVCWHYEGKQF 362 (591)
Q Consensus 297 ~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~d-----------g~i~iwd~~~~~~~~~~---~~~~~v~~~~~sp~g~~l 362 (591)
...+..|...+..++|+| ++++|++++.+ +.|++||+.+++..... .|...+.+++|+|++++|
T Consensus 209 -~~~~~~~~~~~~~~~~s~-dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l 286 (297)
T 2ojh_A 209 -VERITDSAYGDWFPHPSP-SGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEF 286 (297)
T ss_dssp -EEECCCCSEEEEEEEECT-TSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEE
T ss_pred -cEEEecCCcccCCeEECC-CCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeeeccCCCCcccccceECCCCCEE
Confidence 224566777899999999 99999988765 57999999987654433 477889999999999999
Q ss_pred EEEecCC
Q psy710 363 LCSHTDG 369 (591)
Q Consensus 363 ~s~~~dg 369 (591)
++++.|.
T Consensus 287 ~~~~~~~ 293 (297)
T 2ojh_A 287 AYVRYFP 293 (297)
T ss_dssp EEEEECC
T ss_pred EEEEecc
Confidence 9887654
No 144
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.93 E-value=2.7e-23 Score=201.75 Aligned_cols=280 Identities=14% Similarity=0.153 Sum_probs=213.6
Q ss_pred CCcceEEEEEeecCCEEEEecC-------CCeEEEEeecccCceeeeEEEeeccceEEEEeeCCceEEEEEe-CCCcEEE
Q psy710 47 TDAAVIQMQFLTNEGALITATA-------DDSLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGT-EKGNIHV 118 (591)
Q Consensus 47 h~~~v~~l~~sp~~~~l~s~~~-------d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~v 118 (591)
....+..++|+|+++++++++. ++.|.+||..+++ .+..+.. ...+..++|+|+++.+++++ .++.|.+
T Consensus 39 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~--~~~~~~~-~~~~~~~~~s~dg~~l~v~~~~~~~v~~ 115 (353)
T 3vgz_A 39 VGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLE--VTQAIHN-DLKPFGATINNTTQTLWFGNTVNSAVTA 115 (353)
T ss_dssp EESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCC--EEEEEEE-SSCCCSEEEETTTTEEEEEETTTTEEEE
T ss_pred hccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCe--EEEEEec-CCCcceEEECCCCCEEEEEecCCCEEEE
Confidence 3456889999999998887763 5689999999875 4555554 34578899999999666554 4799999
Q ss_pred EEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCCCCEEEEEe--CCCcEEEeCC
Q psy710 119 VNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGT--KTGSLRLLGR 196 (591)
Q Consensus 119 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~dg~i~i~d~ 196 (591)
||..+++....+....... .....+..+.+++|+|+++.++++. .++.|.+||.
T Consensus 116 ~d~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~ 171 (353)
T 3vgz_A 116 IDAKTGEVKGRLVLDDRKR------------------------TEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDG 171 (353)
T ss_dssp EETTTCCEEEEEESCCCCC------------------------CSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEET
T ss_pred EeCCCCeeEEEEecCCCcc------------------------ccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcC
Confidence 9999887766554211100 0001122368899999999887776 4788999999
Q ss_pred CCeEEEEecc-CCCcEEEEEEEcCCceEEEEeCCCcEEEEEccCCCcceEEeeee----ccccEEEEEecCCCCEEEEEe
Q psy710 197 PGVDAHVRHE-TDAAVIQMQFLTNEGALITATADDSLHLWNFRQKRPEIVHSLKF----QRERITYIHLPLQSKWLYVGT 271 (591)
Q Consensus 197 ~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~----~~~~v~~~~~sp~~~~l~~~~ 271 (591)
.+.+...... ....+..++|+|+++++++++.++.|.+||..++ +.+..+.. +...+..++|+|+++++++++
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~--~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~ 249 (353)
T 3vgz_A 172 GNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADN--KILSRKKLLDDGKEHFFINISLDTARQRAFITD 249 (353)
T ss_dssp TTTEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTT--EEEEEEECCCSSSCCCEEEEEEETTTTEEEEEE
T ss_pred CCCceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCC--eEEEEEEcCCCCCCcccceEEECCCCCEEEEEe
Confidence 9888776555 4456889999999999999999999999999987 56655553 445688899999999887776
Q ss_pred CC-ccEEEEEccCccccceeeehhhhccccccCCCCCeEEEecCCCCCCeEEEEE-cCCEEEEEecccceEEEEeccCCC
Q psy710 272 EK-GNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKLLLAY-ETGLVVHWDLKLKRAEFRWQCSEP 349 (591)
Q Consensus 272 ~d-g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~ 349 (591)
.+ +.|.+||+.+++... .+.... ...++|+| ++++++++. .++.|.+||..+++....+.....
T Consensus 250 ~~~~~v~~~d~~~~~~~~-----------~~~~~~--~~~~~~s~-dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~ 315 (353)
T 3vgz_A 250 SKAAEVLVVDTRNGNILA-----------KVAAPE--SLAVLFNP-ARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTPTH 315 (353)
T ss_dssp SSSSEEEEEETTTCCEEE-----------EEECSS--CCCEEEET-TTTEEEEEETTTTEEEEEETTTTEEEEEEECCSE
T ss_pred CCCCEEEEEECCCCcEEE-----------EEEcCC--CceEEECC-CCCEEEEEECCCCeEEEEECCCCeEEEEEecCCC
Confidence 54 899999998877632 111111 24689999 999776665 689999999999999988887778
Q ss_pred eeEEEEeecCCEEEEEecCC
Q psy710 350 IKSVCWHYEGKQFLCSHTDG 369 (591)
Q Consensus 350 v~~~~~sp~g~~l~s~~~dg 369 (591)
+.+++|+|+|++|+.+..++
T Consensus 316 ~~~~~~s~dg~~l~v~~~~~ 335 (353)
T 3vgz_A 316 PNSLALSADGKTLYVSVKQK 335 (353)
T ss_dssp EEEEEECTTSCEEEEEEECC
T ss_pred CCeEEEcCCCCEEEEEEccc
Confidence 99999999999887776654
No 145
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.93 E-value=3.2e-24 Score=202.64 Aligned_cols=256 Identities=8% Similarity=-0.004 Sum_probs=195.8
Q ss_pred EEeCCCcEEEEcCCCceeEeeccCCcceEEEEEeecCCEEEEecCCCeEEEEeecc-cCceeeeEEEee-ccceEEEEee
Q psy710 24 IGTKTGSLRLLGRPGVDAHVRHETDAAVIQMQFLTNEGALITATADDSLHLWNFRQ-KRPEIVHSLKFQ-RERITYIHLP 101 (591)
Q Consensus 24 ~g~~dg~i~lw~~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~~~d~~i~vw~~~~-~~~~~~~~~~~~-~~~v~~~~~~ 101 (591)
.++.++.|++||+.......+..|...|.+++|+|++++|++++ ++.|.+||+.+ ++ .......+ ...+.+++|+
T Consensus 17 ~~~~~~~i~~~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~--~~~~~~~~~~~~~~~~~~s 93 (297)
T 2ojh_A 17 GGSMRSSIEIFNIRTRKMRVVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPS--PEKVDTGFATICNNDHGIS 93 (297)
T ss_dssp -CCCCEEEEEEETTTTEEEEEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCS--CEECCCTTCCCBCSCCEEC
T ss_pred CCCcceeEEEEeCCCCceeeeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCC--ceEeccccccccccceEEC
Confidence 34578999999998777777888999999999999999999986 78999999998 65 33333344 3678899999
Q ss_pred CCceEEEEEe--CCCcEEEEEeee--eeeeceecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECC
Q psy710 102 LQSKWLYVGT--EKGNIHVVNIES--FTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDP 177 (591)
Q Consensus 102 ~~~~~l~~~~--~d~~i~vwd~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 177 (591)
|+++.|++++ .++...+|.+.. ++.. .+ .....+..++|+|
T Consensus 94 pdg~~l~~~~~~~~~~~~l~~~~~~~~~~~-~~----------------------------------~~~~~~~~~~~sp 138 (297)
T 2ojh_A 94 PDGALYAISDKVEFGKSAIYLLPSTGGTPR-LM----------------------------------TKNLPSYWHGWSP 138 (297)
T ss_dssp TTSSEEEEEECTTTSSCEEEEEETTCCCCE-EC----------------------------------CSSSSEEEEEECT
T ss_pred CCCCEEEEEEeCCCCcceEEEEECCCCceE-Ee----------------------------------ecCCCccceEECC
Confidence 9999999998 345666666543 2211 10 1122378899999
Q ss_pred CCCEEE-EEeCCCcEEEeC--CCCeEEEEeccCCCcEEEEEEEcCCceEEEEe-CCCcEEEEEccCCCcceEEeeeeccc
Q psy710 178 IQKLLA-IGTKTGSLRLLG--RPGVDAHVRHETDAAVIQMQFLTNEGALITAT-ADDSLHLWNFRQKRPEIVHSLKFQRE 253 (591)
Q Consensus 178 ~~~~l~-~~~~dg~i~i~d--~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~~wd~~~~~~~~~~~~~~~~~ 253 (591)
+++.++ ++..++.+++|+ ..+.+......+...+.+++|+|++++|++++ .++.+++|++.... .....+..+..
T Consensus 139 dg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~ 217 (297)
T 2ojh_A 139 DGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDG-SSVERITDSAY 217 (297)
T ss_dssp TSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTS-SCEEECCCCSE
T ss_pred CCCEEEEEECCCCceEEEEEECCCCcceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCC-CCcEEEecCCc
Confidence 999877 777889888887 45556655556667899999999999887766 58999999987332 45667777778
Q ss_pred cEEEEEecCCCCEEEEEeCC-----------ccEEEEEccCccccceeeehhhhccccccCCCCCeEEEecCCCCCCeEE
Q psy710 254 RITYIHLPLQSKWLYVGTEK-----------GNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKLL 322 (591)
Q Consensus 254 ~v~~~~~sp~~~~l~~~~~d-----------g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~ 322 (591)
.+..++|+|++++|++++.+ +.|++||+.+++... ......|...+..++|+| ++++|+
T Consensus 218 ~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~---------~~~~~~~~~~~~~~~~sp-dg~~l~ 287 (297)
T 2ojh_A 218 GDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVET---------LFDLFGGQGTMNSPNWSP-DGDEFA 287 (297)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEE---------EEEEEESTTTSCSCCBCT-TSSEEE
T ss_pred ccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCcee---------eeccCCCCcccccceECC-CCCEEE
Confidence 89999999999999888765 569999998876521 113346778899999999 999998
Q ss_pred EEEcCC
Q psy710 323 LAYETG 328 (591)
Q Consensus 323 ~~~~dg 328 (591)
+++.+.
T Consensus 288 ~~~~~~ 293 (297)
T 2ojh_A 288 YVRYFP 293 (297)
T ss_dssp EEEECC
T ss_pred EEEecc
Confidence 877653
No 146
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.93 E-value=3.5e-24 Score=206.54 Aligned_cols=272 Identities=9% Similarity=0.018 Sum_probs=201.9
Q ss_pred cEEEEEeCCCcEEEEcCCC-ceeEeeccCC-c-ceEEEEEeecCCEEE-EecCCCeEEEEeecccCceeeeEEEee----
Q psy710 20 KLLAIGTKTGSLRLLGRPG-VDAHVRHETD-A-AVIQMQFLTNEGALI-TATADDSLHLWNFRQKRPEIVHSLKFQ---- 91 (591)
Q Consensus 20 ~~la~g~~dg~i~lw~~~~-~~~~~~~~h~-~-~v~~l~~sp~~~~l~-s~~~d~~i~vw~~~~~~~~~~~~~~~~---- 91 (591)
++|++++.++.|.+||... .....+.... . .+..++|+|++++++ ++..++.|.+||+.+++ .+..+...
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~--~~~~~~~~~~~~ 79 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGE--TLGRIDLSTPEE 79 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCC--EEEEEECCBTTE
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCC--eEeeEEcCCccc
Confidence 5789999999999999874 4444444222 2 588999999997764 55668999999998875 44444421
Q ss_pred -ccceEEEEeeCCceEEEEEe------------CCCcEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCc
Q psy710 92 -RERITYIHLPLQSKWLYVGT------------EKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDP 158 (591)
Q Consensus 92 -~~~v~~~~~~~~~~~l~~~~------------~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (591)
...+..++|+|+++.++++. .++.|.+||+.+++....+.
T Consensus 80 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~--------------------------- 132 (337)
T 1pby_B 80 RVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFE--------------------------- 132 (337)
T ss_dssp EEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEE---------------------------
T ss_pred ccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEe---------------------------
Confidence 22577899999999998886 57999999998876554443
Q ss_pred ceeeeccCCCCceEEEECCCCCEEEEEeCCCcEEEeCCCCeEEEEeccCCCcEEEEEEEcCCceEEEEeCCC--------
Q psy710 159 SKTFRHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGVDAHVRHETDAAVIQMQFLTNEGALITATADD-------- 230 (591)
Q Consensus 159 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-------- 230 (591)
....+.+++|+|++++++++ ++.|++||..+.+.............+.|+|+++.++..+.++
T Consensus 133 -------~~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~ 203 (337)
T 1pby_B 133 -------APRQITMLAWARDGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFY 203 (337)
T ss_dssp -------CCSSCCCEEECTTSSCEEEE--SSSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEE
T ss_pred -------CCCCcceeEECCCCCEEEEe--CCeEEEEECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeee
Confidence 12346789999999988887 6899999998887664433211112337889988776554332
Q ss_pred ----------------cEEEEEccCCCcceEEeeeeccccEEEEEecCCCCEEEEEeCCccEEEEEccCccccceeeehh
Q psy710 231 ----------------SLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWN 294 (591)
Q Consensus 231 ----------------~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~ 294 (591)
.|.+||+.+++.. ...+..+...+..++|+|++++++++ ++.|++||+.+++...
T Consensus 204 ~~~~~~~~~~~~~~~~~v~~~d~~~~~~~-~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~------ 274 (337)
T 1pby_B 204 TARKDIDPADPTAYRTGLLTMDLETGEMA-MREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIK------ 274 (337)
T ss_dssp EEBTTSCTTSGGGEEEEEEEEETTTCCEE-EEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEE------
T ss_pred ccccccccccccccccceEEEeCCCCCce-EeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcc------
Confidence 4689999887432 33444555678899999999999988 6899999998876531
Q ss_pred hhccccccCCCCCeEEEecCCCCCCeEEEEEcCCEEEEEecccceEEEEec
Q psy710 295 KAIDVCMKTHPGPIIHLSDNPLDPSKLLLAYETGLVVHWDLKLKRAEFRWQ 345 (591)
Q Consensus 295 ~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 345 (591)
.+. ....+.+++|+| ++++|++++.++.|++||+.+++.+..+.
T Consensus 275 -----~~~-~~~~~~~~~~s~-dg~~l~~~~~~~~i~v~d~~~~~~~~~~~ 318 (337)
T 1pby_B 275 -----RVP-LPHSYYSVNVST-DGSTVWLGGALGDLAAYDAETLEKKGQVD 318 (337)
T ss_dssp -----EEE-CSSCCCEEEECT-TSCEEEEESBSSEEEEEETTTCCEEEEEE
T ss_pred -----eec-CCCceeeEEECC-CCCEEEEEcCCCcEEEEECcCCcEEEEEE
Confidence 111 224578899999 99999999889999999999998887765
No 147
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.92 E-value=6.2e-23 Score=199.21 Aligned_cols=269 Identities=14% Similarity=0.138 Sum_probs=203.0
Q ss_pred CCCCcEEEeCCCCcEEEEEeC-------CCcEEEEcCC-CceeEeeccCCcceEEEEEeecCCEEE-EecCCCeEEEEee
Q psy710 7 PYQPTAIAFDPIQKLLAIGTK-------TGSLRLLGRP-GVDAHVRHETDAAVIQMQFLTNEGALI-TATADDSLHLWNF 77 (591)
Q Consensus 7 ~~~v~~~~~spdg~~la~g~~-------dg~i~lw~~~-~~~~~~~~~h~~~v~~l~~sp~~~~l~-s~~~d~~i~vw~~ 77 (591)
...+..++|+|+|+++++++. ++.|.+||.. ++....+.. ...+..++|+|++++++ +...++.|.+||.
T Consensus 40 ~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~ 118 (353)
T 3vgz_A 40 GKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHN-DLKPFGATINNTTQTLWFGNTVNSAVTAIDA 118 (353)
T ss_dssp ESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEE-SSCCCSEEEETTTTEEEEEETTTTEEEEEET
T ss_pred ccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEec-CCCcceEEECCCCCEEEEEecCCCEEEEEeC
Confidence 356788999999998888774 5689999987 444444443 34578899999998655 5555899999999
Q ss_pred cccCceeeeEEEeecc---------ceEEEEeeCCceEEEEEe--CCCcEEEEEeeeeeeeceecccccccccCCCCCCC
Q psy710 78 RQKRPEIVHSLKFQRE---------RITYIHLPLQSKWLYVGT--EKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPG 146 (591)
Q Consensus 78 ~~~~~~~~~~~~~~~~---------~v~~~~~~~~~~~l~~~~--~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (591)
.+++ .+..+..+.. .+.+++|+|+++.+++++ .++.|.+||..+++....+.
T Consensus 119 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~--------------- 181 (353)
T 3vgz_A 119 KTGE--VKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQ--------------- 181 (353)
T ss_dssp TTCC--EEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEEC---------------
T ss_pred CCCe--eEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEec---------------
Confidence 9885 4555554432 278899999999888776 47889999999877665543
Q ss_pred ceeccCCCCcCcceeeeccCCCCceEEEECCCCCEEEEEeCCCcEEEeCCCCeEEEEecc-----CCCcEEEEEEEcCCc
Q psy710 147 PIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGVDAHVRHE-----TDAAVIQMQFLTNEG 221 (591)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-----~~~~v~~~~~~~~~~ 221 (591)
.+...+..++|+|+++.++++..++.|.+||..+.+...... +...+..++|+|+++
T Consensus 182 ------------------~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~ 243 (353)
T 3vgz_A 182 ------------------NTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQ 243 (353)
T ss_dssp ------------------CCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTT
T ss_pred ------------------CCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCC
Confidence 122336789999999999999999999999998887664332 234678899999999
Q ss_pred eEEEEeC-CCcEEEEEccCCCcceEEeeeeccccEEEEEecCCCCEEEEEe-CCccEEEEEccCccccceeeehhhhccc
Q psy710 222 ALITATA-DDSLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGT-EKGNIHVVNIESFTLSGYIINWNKAIDV 299 (591)
Q Consensus 222 ~l~~~~~-d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~~~~ 299 (591)
++++++. ++.|.+||..++ +.+..+.... ...++|+|++++++++. .++.|.+||..+++...
T Consensus 244 ~l~~~~~~~~~v~~~d~~~~--~~~~~~~~~~--~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~----------- 308 (353)
T 3vgz_A 244 RAFITDSKAAEVLVVDTRNG--NILAKVAAPE--SLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVK----------- 308 (353)
T ss_dssp EEEEEESSSSEEEEEETTTC--CEEEEEECSS--CCCEEEETTTTEEEEEETTTTEEEEEETTTTEEEE-----------
T ss_pred EEEEEeCCCCEEEEEECCCC--cEEEEEEcCC--CceEEECCCCCEEEEEECCCCeEEEEECCCCeEEE-----------
Confidence 8777655 489999999887 5666665432 25689999999776665 68999999999877632
Q ss_pred cccCCCCCeEEEecCCCCCCeEEEEEcCC
Q psy710 300 CMKTHPGPIIHLSDNPLDPSKLLLAYETG 328 (591)
Q Consensus 300 ~~~~~~~~v~~~~~sp~~~~~l~~~~~dg 328 (591)
.+. ....+.+++|+| ++++|+++..++
T Consensus 309 ~~~-~~~~~~~~~~s~-dg~~l~v~~~~~ 335 (353)
T 3vgz_A 309 TFD-TPTHPNSLALSA-DGKTLYVSVKQK 335 (353)
T ss_dssp EEE-CCSEEEEEEECT-TSCEEEEEEECC
T ss_pred EEe-cCCCCCeEEEcC-CCCEEEEEEccc
Confidence 222 234678999999 999887766653
No 148
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.92 E-value=1.9e-24 Score=230.72 Aligned_cols=332 Identities=9% Similarity=0.028 Sum_probs=221.0
Q ss_pred cEEEeCCCCcEEEEEeCCCcEEEEcCCCceeE-eeccCCc---ceEEEEEeecCCEEEEecC---------CCeEEEEee
Q psy710 11 TAIAFDPIQKLLAIGTKTGSLRLLGRPGVDAH-VRHETDA---AVIQMQFLTNEGALITATA---------DDSLHLWNF 77 (591)
Q Consensus 11 ~~~~~spdg~~la~g~~dg~i~lw~~~~~~~~-~~~~h~~---~v~~l~~sp~~~~l~s~~~---------d~~i~vw~~ 77 (591)
..++|+|||++++++ .|+.|++||+.+.... .+..|.. .+.+++|||||++|++++. ++.|++||+
T Consensus 19 ~~~~~s~dg~~~~~~-~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~ 97 (719)
T 1z68_A 19 FFPNWISGQEYLHQS-ADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDL 97 (719)
T ss_dssp CCCEESSSSEEEEEC-TTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEET
T ss_pred CccEECCCCeEEEEc-CCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEEC
Confidence 478999999766654 6999999999854444 4444433 3899999999999998876 789999999
Q ss_pred cccCceeeeEEEeeccceEEEEeeCCceEEEEEeCCCcEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCCCcC
Q psy710 78 RQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLD 157 (591)
Q Consensus 78 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (591)
.+++......+ ...+..++|+|||+.|+.+. ++.|++|++.+++..........
T Consensus 98 ~~g~~~~~~~l---~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~---------------------- 151 (719)
T 1z68_A 98 SNGEFVRGNEL---PRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRE---------------------- 151 (719)
T ss_dssp TTTEECCSSCC---CSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBT----------------------
T ss_pred CCCccccceec---CcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCc----------------------
Confidence 98742000222 24688899999999999986 68999999988765432210000
Q ss_pred cceeeeccCC---------CCceEEEECCCCCEEEEEeCCC----------------------------------cEEEe
Q psy710 158 PSKTFRHGFP---------YQPTAIAFDPIQKLLAIGTKTG----------------------------------SLRLL 194 (591)
Q Consensus 158 ~~~~~~~~~~---------~~v~~~~~~~~~~~l~~~~~dg----------------------------------~i~i~ 194 (591)
..+..|+. ....+++|+|||+.|++++.+. .|++|
T Consensus 152 --~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~ 229 (719)
T 1z68_A 152 --NKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFII 229 (719)
T ss_dssp --TTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEE
T ss_pred --CCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEE
Confidence 00001222 2235899999999999887652 78899
Q ss_pred CCCCeEEE---Ee------ccCCCcEEEEEEEcCCceEEEEeCC----CcEEEEE----ccCCCcceEEee----eeccc
Q psy710 195 GRPGVDAH---VR------HETDAAVIQMQFLTNEGALITATAD----DSLHLWN----FRQKRPEIVHSL----KFQRE 253 (591)
Q Consensus 195 d~~~~~~~---~~------~~~~~~v~~~~~~~~~~~l~~~~~d----~~i~~wd----~~~~~~~~~~~~----~~~~~ 253 (591)
|+.+.+.. .. ..+...+..++|+||++.+++.... ..|.+|| ..++ +....+ ..+..
T Consensus 230 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g--~~~~~~~~~~~~~~~ 307 (719)
T 1z68_A 230 DTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTW--DCPKTQEHIEESRTG 307 (719)
T ss_dssp ESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSE--ECCGGGEEEEECSSS
T ss_pred ECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCC--ceEEEEecccccCCc
Confidence 98876531 11 1245578999999998777664332 2488888 6655 333333 34555
Q ss_pred cEE-----EEEecCCCCEEEE--EeCCc--cEEEEEccCccccceeeehhhhccccccCCCCCeEEEecCCCCCCeEEEE
Q psy710 254 RIT-----YIHLPLQSKWLYV--GTEKG--NIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKLLLA 324 (591)
Q Consensus 254 ~v~-----~~~~sp~~~~l~~--~~~dg--~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~ 324 (591)
.+. .+.|+|||+.++. ...+| .|.+||+.+++.. .+..+...+..+.++ +++.|+..
T Consensus 308 ~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~~~------------~lt~~~~~v~~~~~~--d~~~i~~~ 373 (719)
T 1z68_A 308 WAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVENAI------------QITSGKWEAINIFRV--TQDSLFYS 373 (719)
T ss_dssp CSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTTCE------------ECSCSSSCEEEEEEE--CSSEEEEE
T ss_pred eEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCceE------------ecccCceEEEEEEEE--eCCEEEEE
Confidence 565 7899999996654 44555 5667777665431 334455567776666 45666665
Q ss_pred EcC-----CEEEEEeccc--ce-EEEEec-----cCCCeeEEEEeecCCEEEEE-ecC--CcEEEEecCCCCCceeeecc
Q psy710 325 YET-----GLVVHWDLKL--KR-AEFRWQ-----CSEPIKSVCWHYEGKQFLCS-HTD--GTISTWAVRPLAKPVSVNQP 388 (591)
Q Consensus 325 ~~d-----g~i~iwd~~~--~~-~~~~~~-----~~~~v~~~~~sp~g~~l~s~-~~d--g~i~vwd~~~~~~~~~~~~~ 388 (591)
+.+ +..++|.+.. +. ....+. +...+..+.|+|++++++.. +.+ ..+.+||+. +++....+..
T Consensus 374 ~~~~~~~~~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~s~dg~~l~~~~s~~~~p~~~l~d~~-~g~~~~~~~~ 452 (719)
T 1z68_A 374 SNEFEEYPGRRNIYRISIGSYPPSKKCVTCHLRKERCQYYTASFSDYAKYYALVCYGPGIPISTLHDGR-TDQEIKILEE 452 (719)
T ss_dssp ESCGGGCTTCBEEEEEECSSSSCCEEESSTTTTTTTBCBEEEEECGGGSSEEEEECCBSSCEEEEECSS-SCCEEEEEEC
T ss_pred EecCCCCCceEEEEEEeCCCCCCCceeccCccCCCCCceEEEEECCCCCEEEEEcCCCCCCeEEEEECC-CCCEEEEeec
Confidence 544 7888888764 32 122332 44578899999999877754 333 468899987 5665554443
No 149
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.91 E-value=1.9e-21 Score=188.18 Aligned_cols=271 Identities=9% Similarity=0.076 Sum_probs=182.8
Q ss_pred CCCeEEEEeecccCceeee-EEEeeccceEEEEeeCCceEEEEEeC---CCcEEEEEeeeeeeeceecccccccccCCCC
Q psy710 68 ADDSLHLWNFRQKRPEIVH-SLKFQRERITYIHLPLQSKWLYVGTE---KGNIHVVNIESFTLSGYIINWNKAIDVCMKT 143 (591)
Q Consensus 68 ~d~~i~vw~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~---d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~ 143 (591)
.++.|.+|+++....+... ....+...+..++|+|+++ |++++. ++.|++|++.+++......
T Consensus 14 ~~~~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~------------ 80 (347)
T 3hfq_A 14 TSQGIYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNT------------ 80 (347)
T ss_dssp SCCEEEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEE------------
T ss_pred CCCCEEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeee------------
Confidence 4667889888754322222 3344556788899999999 665554 6899999997655322110
Q ss_pred CCCceeccCCCCcCcceeeeccCCCCceEEEECCCCCEEEEEe-CCCcEEEeCCC---CeEEEEeccC----------CC
Q psy710 144 HPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGT-KTGSLRLLGRP---GVDAHVRHET----------DA 209 (591)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~i~d~~---~~~~~~~~~~----------~~ 209 (591)
+ ..+...+..++|+|++++|++++ .++.+.+|++. .......... ..
T Consensus 81 ------------------~-~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~ 141 (347)
T 3hfq_A 81 ------------------V-VAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGS 141 (347)
T ss_dssp ------------------E-EEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSC
T ss_pred ------------------e-ecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCC
Confidence 0 12345578999999999888887 68999999985 2222222111 12
Q ss_pred cEEEEEEEcCCceEEEEeCCCcEEEEEcc-CCCcceEEeeeec-cccEEEEEecCCCCEEEE-EeCCccEEEEEccC--c
Q psy710 210 AVIQMQFLTNEGALITATADDSLHLWNFR-QKRPEIVHSLKFQ-RERITYIHLPLQSKWLYV-GTEKGNIHVVNIES--F 284 (591)
Q Consensus 210 ~v~~~~~~~~~~~l~~~~~d~~i~~wd~~-~~~~~~~~~~~~~-~~~v~~~~~sp~~~~l~~-~~~dg~i~i~d~~~--~ 284 (591)
.+.+++|+|+|+.+++...++.|.+|++. ++.......+..+ ...+..++|+|||+++++ ...++.|.+|++.. +
T Consensus 142 ~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g 221 (347)
T 3hfq_A 142 HIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTG 221 (347)
T ss_dssp CEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTT
T ss_pred CceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCC
Confidence 48889999999966666678899999998 4422222223322 236788999999997666 45678999999875 3
Q ss_pred cccceeeehhhhcccccc---CCCCCeEEEecCCCCCCeEEE-EEcCCEEEEEeccc-c--eEEEEec-cCCCeeEEEEe
Q psy710 285 TLSGYIINWNKAIDVCMK---THPGPIIHLSDNPLDPSKLLL-AYETGLVVHWDLKL-K--RAEFRWQ-CSEPIKSVCWH 356 (591)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~---~~~~~v~~~~~sp~~~~~l~~-~~~dg~i~iwd~~~-~--~~~~~~~-~~~~v~~~~~s 356 (591)
+.... .. ..... .....+..++|+| |+++|++ ...++.|.+|++.. + +.+..+. +...+..++|+
T Consensus 222 ~~~~~-~~-----~~~~~~~~~~~~~~~~i~~sp-dG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~s 294 (347)
T 3hfq_A 222 AFTQL-GI-----VKTIPADYTAHNGAAAIRLSH-DGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLD 294 (347)
T ss_dssp EEEEE-EE-----EESSCTTCCSCCEEEEEEECT-TSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEEC
T ss_pred ceEEe-ee-----eeecCCCCCCCCcceeEEECC-CCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEEC
Confidence 32110 00 00111 1124588999999 9998754 55689999999973 2 3333333 45678999999
Q ss_pred ecCCEEEEEecC-CcEEEEecC
Q psy710 357 YEGKQFLCSHTD-GTISTWAVR 377 (591)
Q Consensus 357 p~g~~l~s~~~d-g~i~vwd~~ 377 (591)
|||++|++++.+ +.|.+|+++
T Consensus 295 pdg~~l~v~~~~~~~v~v~~~d 316 (347)
T 3hfq_A 295 PTEAFVVVVNQNTDNATLYARD 316 (347)
T ss_dssp TTSSEEEEEETTTTEEEEEEEC
T ss_pred CCCCEEEEEEcCCCcEEEEEEe
Confidence 999999888765 889999776
No 150
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.91 E-value=4e-23 Score=214.58 Aligned_cols=268 Identities=9% Similarity=-0.027 Sum_probs=199.8
Q ss_pred CcceEEEEEeecCCEEEEecC-CCeEEEEeecccCceeeeEEEeec-cceEEEEeeCCceEEEEEeC---CCcEEEEEee
Q psy710 48 DAAVIQMQFLTNEGALITATA-DDSLHLWNFRQKRPEIVHSLKFQR-ERITYIHLPLQSKWLYVGTE---KGNIHVVNIE 122 (591)
Q Consensus 48 ~~~v~~l~~sp~~~~l~s~~~-d~~i~vw~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~---d~~i~vwd~~ 122 (591)
..+|++++|+|||++||+++. |++++||++++++ ...+..+. ..+..++|+|| +.+++++. +....+|.+.
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~---~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~ 96 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGE---TVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVN 96 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTE---EEECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEE
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEEcCCC---cEeeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEe
Confidence 568999999999999999887 9999999996653 34455555 58999999999 77777765 4556676654
Q ss_pred e---eeeeceecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCCCCE-EEEEeCCCcEEEeCCCC
Q psy710 123 S---FTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKL-LAIGTKTGSLRLLGRPG 198 (591)
Q Consensus 123 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~dg~i~i~d~~~ 198 (591)
. +... .+. ....+...+|+|+++. +++...++.+.+||+.+
T Consensus 97 ~~~~g~~~-~l~----------------------------------~~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~ 141 (582)
T 3o4h_A 97 TSRPGEEQ-RLE----------------------------------AVKPMRILSGVDTGEAVVFTGATEDRVALYALDG 141 (582)
T ss_dssp TTSTTCCE-ECT----------------------------------TSCSBEEEEEEECSSCEEEEEECSSCEEEEEEET
T ss_pred ccCCCccc-ccc----------------------------------CCCCceeeeeCCCCCeEEEEecCCCCceEEEccC
Confidence 3 1110 110 1122346678887753 33444455566999988
Q ss_pred eEEEEeccCCCcEEEEEEEcCCceEEEEeCC----CcEEEEEccCCCcceEEeeeeccccEEEEEecCCCCEEEEEeCCc
Q psy710 199 VDAHVRHETDAAVIQMQFLTNEGALITATAD----DSLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEKG 274 (591)
Q Consensus 199 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg 274 (591)
++......+.. .+++|+|||++|++++.+ +.|++||+.+++ . ..+..+...+..++|+|||+.|+++..++
T Consensus 142 g~~~~l~~~~~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~--~-~~l~~~~~~~~~~~~SpDG~~l~~~~~~~ 216 (582)
T 3o4h_A 142 GGLRELARLPG--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGG--L-RVFDSGEGSFSSASISPGMKVTAGLETAR 216 (582)
T ss_dssp TEEEEEEEESS--CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCC--C-EEECCSSCEEEEEEECTTSCEEEEEECSS
T ss_pred CcEEEeecCCC--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCC--c-eEeecCCCccccceECCCCCEEEEccCCC
Confidence 77665544422 889999999999988776 779999998873 2 35667778899999999999999888888
Q ss_pred --cEEEEEccCccccceeeehhhhccccccCCCCCeEEEe--------cCCCCCCeEEEEEcCCEEEEEecccceEEEEe
Q psy710 275 --NIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLS--------DNPLDPSKLLLAYETGLVVHWDLKLKRAEFRW 344 (591)
Q Consensus 275 --~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--------~sp~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 344 (591)
.|++||+.+++.. .+..|...+..++ |+| |+.++++++.|+.+++|++ ++...
T Consensus 217 ~~~i~~~d~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~sp-dg~~~~~~~~~g~~~l~~~--g~~~~-- 279 (582)
T 3o4h_A 217 EARLVTVDPRDGSVE------------DLELPSKDFSSYRPTAITWLGYLP-DGRLAVVARREGRSAVFID--GERVE-- 279 (582)
T ss_dssp CEEEEEECTTTCCEE------------ECCCSCSHHHHHCCSEEEEEEECT-TSCEEEEEEETTEEEEEET--TEEEC--
T ss_pred eeEEEEEcCCCCcEE------------EccCCCcChhhhhhccccceeEcC-CCcEEEEEEcCCcEEEEEE--CCeec--
Confidence 8999999887652 3455666666666 999 9988888999999999999 65544
Q ss_pred ccCCCeeEEEEeecCCEEEEEecCCc---EEEEecC
Q psy710 345 QCSEPIKSVCWHYEGKQFLCSHTDGT---ISTWAVR 377 (591)
Q Consensus 345 ~~~~~v~~~~~sp~g~~l~s~~~dg~---i~vwd~~ 377 (591)
.....+.+++|+ +++++++++.+.. +++||..
T Consensus 280 ~~~~~v~~~~~s-dg~~l~~~s~~~~p~~l~~~d~~ 314 (582)
T 3o4h_A 280 APQGNHGRVVLW-RGKLVTSHTSLSTPPRIVSLPSG 314 (582)
T ss_dssp CCSSEEEEEEEE-TTEEEEEEEETTEEEEEEEETTC
T ss_pred cCCCceEEEEec-CCEEEEEEcCCCCCCeEEEEcCC
Confidence 344678899999 9999999887754 6666665
No 151
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.91 E-value=4.6e-22 Score=192.47 Aligned_cols=288 Identities=10% Similarity=0.109 Sum_probs=193.9
Q ss_pred cEEEEEeC----CCcEEEEcCC--CceeE--eeccCCcceEEEEEeecCCEEEEecC---CCeEEEEeecccCceeeeEE
Q psy710 20 KLLAIGTK----TGSLRLLGRP--GVDAH--VRHETDAAVIQMQFLTNEGALITATA---DDSLHLWNFRQKRPEIVHSL 88 (591)
Q Consensus 20 ~~la~g~~----dg~i~lw~~~--~~~~~--~~~~h~~~v~~l~~sp~~~~l~s~~~---d~~i~vw~~~~~~~~~~~~~ 88 (591)
+.+++|+. ++.|.+|+++ ...+. ....+...+..++|+|||+ |++++. ++.|.+|++.+++.+.+..+
T Consensus 3 ~~~~vg~y~~~~~~~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~ 81 (347)
T 3hfq_A 3 ERILFGTYTKKTSQGIYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTV 81 (347)
T ss_dssp EEEEEEECCSSSCCEEEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEE
T ss_pred cEEEEEeccCCCCCCEEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeee
Confidence 35566643 4568888764 23332 2334556778899999999 665544 68999999987754455666
Q ss_pred EeeccceEEEEeeCCceEEEEEe-CCCcEEEEEeee-ee--eeceecccccccccCCCCCCCceeccCCCCcCcceeeec
Q psy710 89 KFQRERITYIHLPLQSKWLYVGT-EKGNIHVVNIES-FT--LSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRH 164 (591)
Q Consensus 89 ~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~vwd~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (591)
..+...+..++|+|++++|++++ .++.|.+|++.. +. ....+..... .+. ..
T Consensus 82 ~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~---------------------~p~---~~ 137 (347)
T 3hfq_A 82 VAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGH---------------------GPR---PE 137 (347)
T ss_dssp EEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCC---------------------CSS---TT
T ss_pred ecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCC---------------------CCC---cc
Confidence 66778889999999999998888 678999999963 22 2111110000 000 00
Q ss_pred cCCCCceEEEECCCCCEEEEEeCCCcEEEeCCC-CeEEEE----eccCCCcEEEEEEEcCCceEEE-EeCCCcEEEEEcc
Q psy710 165 GFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRP-GVDAHV----RHETDAAVIQMQFLTNEGALIT-ATADDSLHLWNFR 238 (591)
Q Consensus 165 ~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~-~~~~~~----~~~~~~~v~~~~~~~~~~~l~~-~~~d~~i~~wd~~ 238 (591)
.....+.+++|+|+++++++...++.|++|++. .++... .......+..++|+|+|+++++ ...++.+.+|++.
T Consensus 138 ~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~ 217 (347)
T 3hfq_A 138 QDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYD 217 (347)
T ss_dssp CSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred ccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEec
Confidence 123457899999999966666678899999987 443321 1222346788999999997666 4667899999998
Q ss_pred C--CCcceEEeeeecc------ccEEEEEecCCCCEEEE-EeCCccEEEEEccCc-cccceeeehhhhccccccCCCCCe
Q psy710 239 Q--KRPEIVHSLKFQR------ERITYIHLPLQSKWLYV-GTEKGNIHVVNIESF-TLSGYIINWNKAIDVCMKTHPGPI 308 (591)
Q Consensus 239 ~--~~~~~~~~~~~~~------~~v~~~~~sp~~~~l~~-~~~dg~i~i~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~v 308 (591)
. ++...+..+.... ..+..++|+|||++|++ ...++.|.+|++... .... ...+..+...+
T Consensus 218 ~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~---------~~~~~~~~~~~ 288 (347)
T 3hfq_A 218 TQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTL---------IQQISTEGDFP 288 (347)
T ss_dssp TTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEE---------EEEEECSSSCC
T ss_pred CCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEE---------eEEEecCCCCc
Confidence 5 3212233333222 35889999999998854 556889999999732 2110 11334455667
Q ss_pred EEEecCCCCCCeEEEEEc-CCEEEEE--ecccceEEE
Q psy710 309 IHLSDNPLDPSKLLLAYE-TGLVVHW--DLKLKRAEF 342 (591)
Q Consensus 309 ~~~~~sp~~~~~l~~~~~-dg~i~iw--d~~~~~~~~ 342 (591)
..++|+| |+++|++++. ++.|.+| |..++++..
T Consensus 289 ~~~~~sp-dg~~l~v~~~~~~~v~v~~~d~~tg~l~~ 324 (347)
T 3hfq_A 289 RDFDLDP-TEAFVVVVNQNTDNATLYARDLTSGKLSL 324 (347)
T ss_dssp CEEEECT-TSSEEEEEETTTTEEEEEEECTTTCCEEE
T ss_pred CeEEECC-CCCEEEEEEcCCCcEEEEEEeCCCCeEEe
Confidence 8999999 9999988876 4899999 555666654
No 152
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.91 E-value=1.5e-23 Score=217.86 Aligned_cols=271 Identities=9% Similarity=-0.020 Sum_probs=202.7
Q ss_pred CCCCCcEEEeCCCCcEEEEEeC-CCcEEEEcCCCceeEeeccCC-cceEEEEEeecCCEEEEecC---CCeEEEEeecc-
Q psy710 6 FPYQPTAIAFDPIQKLLAIGTK-TGSLRLLGRPGVDAHVRHETD-AAVIQMQFLTNEGALITATA---DDSLHLWNFRQ- 79 (591)
Q Consensus 6 h~~~v~~~~~spdg~~la~g~~-dg~i~lw~~~~~~~~~~~~h~-~~v~~l~~sp~~~~l~s~~~---d~~i~vw~~~~- 79 (591)
+..+|++++|+|||++||+++. ||+++||++++.....+..|. ..+..++|+|| +.+++++. +...++|.+..
T Consensus 20 ~~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~ 98 (582)
T 3o4h_A 20 IAVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTS 98 (582)
T ss_dssp HHSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETT
T ss_pred hccchheeecCCCCCeEEEEEccCCceeEEEEcCCCcEeeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEecc
Confidence 3567999999999999998876 999999999877777777776 68999999999 77777664 56677777654
Q ss_pred -cCceeeeEEEeeccceEEEEeeCCceE-EEEEeCCCcEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCCCcC
Q psy710 80 -KRPEIVHSLKFQRERITYIHLPLQSKW-LYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLD 157 (591)
Q Consensus 80 -~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (591)
.. ... .+... ..+...+|+|+++. +++.+.++.+.+||+.+++......
T Consensus 99 ~~g-~~~-~l~~~-~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~-------------------------- 149 (582)
T 3o4h_A 99 RPG-EEQ-RLEAV-KPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELAR-------------------------- 149 (582)
T ss_dssp STT-CCE-ECTTS-CSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEE--------------------------
T ss_pred CCC-ccc-cccCC-CCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeec--------------------------
Confidence 22 111 22222 23445688888864 3333444556699998876544322
Q ss_pred cceeeeccCCCCceEEEECCCCCEEEEEeCC----CcEEEeCCCCeEEEEeccCCCcEEEEEEEcCCceEEEEeCCC--c
Q psy710 158 PSKTFRHGFPYQPTAIAFDPIQKLLAIGTKT----GSLRLLGRPGVDAHVRHETDAAVIQMQFLTNEGALITATADD--S 231 (591)
Q Consensus 158 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----g~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--~ 231 (591)
+.. .+++|+|||++++.++.+ +.|++||+.+++......+...+..++|+|||++|+++..++ .
T Consensus 150 --------~~~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~ 219 (582)
T 3o4h_A 150 --------LPG--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRVFDSGEGSFSSASISPGMKVTAGLETAREAR 219 (582)
T ss_dssp --------ESS--CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCEEECCSSCEEEEEEECTTSCEEEEEECSSCEE
T ss_pred --------CCC--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCceEeecCCCccccceECCCCCEEEEccCCCeeE
Confidence 111 789999999999988776 789999998887776666677899999999999999888888 8
Q ss_pred EEEEEccCCCcceEEeeeeccccEEEEE--------ecCCCCEEEEEeCCccEEEEEccCccccceeeehhhhccccccC
Q psy710 232 LHLWNFRQKRPEIVHSLKFQRERITYIH--------LPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKT 303 (591)
Q Consensus 232 i~~wd~~~~~~~~~~~~~~~~~~v~~~~--------~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~ 303 (591)
|++||+.++ +.. .+..+...+..++ |+|||.++++++.++.+++|++ ++.. . .
T Consensus 220 i~~~d~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~--g~~~------------~--~ 280 (582)
T 3o4h_A 220 LVTVDPRDG--SVE-DLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID--GERV------------E--A 280 (582)
T ss_dssp EEEECTTTC--CEE-ECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET--TEEE------------C--C
T ss_pred EEEEcCCCC--cEE-EccCCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE--CCee------------c--c
Confidence 999999887 444 6666666666666 9999998899999999999999 4431 1 2
Q ss_pred CCCCeEEEecCCCCCCeEEEEEcCC---EEEEEeccc
Q psy710 304 HPGPIIHLSDNPLDPSKLLLAYETG---LVVHWDLKL 337 (591)
Q Consensus 304 ~~~~v~~~~~sp~~~~~l~~~~~dg---~i~iwd~~~ 337 (591)
..+.+.+++|+ +++++++++.+. .+++||..+
T Consensus 281 ~~~~v~~~~~s--dg~~l~~~s~~~~p~~l~~~d~~~ 315 (582)
T 3o4h_A 281 PQGNHGRVVLW--RGKLVTSHTSLSTPPRIVSLPSGE 315 (582)
T ss_dssp CSSEEEEEEEE--TTEEEEEEEETTEEEEEEEETTCC
T ss_pred CCCceEEEEec--CCEEEEEEcCCCCCCeEEEEcCCC
Confidence 34678899998 678888877764 466777654
No 153
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.91 E-value=2.7e-22 Score=213.84 Aligned_cols=337 Identities=9% Similarity=0.068 Sum_probs=223.0
Q ss_pred CCCCCCcEEEeCCCCcEEEEEeCCCcEEEEcCC-CceeEeeccCCcc-----eEEEEEeecCCEEEEecCC---------
Q psy710 5 GFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRP-GVDAHVRHETDAA-----VIQMQFLTNEGALITATAD--------- 69 (591)
Q Consensus 5 gh~~~v~~~~~spdg~~la~g~~dg~i~lw~~~-~~~~~~~~~h~~~-----v~~l~~sp~~~~l~s~~~d--------- 69 (591)
++.....+++|+|||++++++ ||.|++||+. +.....+..|... ...++|||||++|+.++.+
T Consensus 14 ~~~~~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~ 91 (740)
T 4a5s_A 14 TYRLKLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYT 91 (740)
T ss_dssp CSCCCCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEE
T ss_pred cccccccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccc
Confidence 445567899999999999986 8999999987 5555566666532 2447899999999988876
Q ss_pred CeEEEEeecccCceeeeEEEeeccceEEEEeeCCceEEEEEeCCCcEEEEEeeeeeeeceecccccccccCCCCCCCcee
Q psy710 70 DSLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPII 149 (591)
Q Consensus 70 ~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (591)
+.+.+||+.+++ ...+..+...+...+|||||+.|+.+. ++.|++|++.+++..+........
T Consensus 92 ~~~~~~d~~~~~---~~~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~------------- 154 (740)
T 4a5s_A 92 ASYDIYDLNKRQ---LITEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKED------------- 154 (740)
T ss_dssp EEEEEEETTTTE---ECCSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSCCBTT-------------
T ss_pred eEEEEEECCCCc---EEEcccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcCCCCcc-------------
Confidence 566799999884 345666778899999999999999885 689999999886644322100000
Q ss_pred ccCCCCcCcceeeeccCC---------CCceEEEECCCCCEEEEEeCCC-------------------------------
Q psy710 150 HLSDNPLDPSKTFRHGFP---------YQPTAIAFDPIQKLLAIGTKTG------------------------------- 189 (591)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~---------~~v~~~~~~~~~~~l~~~~~dg------------------------------- 189 (591)
..+ .++. +....++|+|||+.||.+..|.
T Consensus 155 ----------~~~-~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~ 223 (740)
T 4a5s_A 155 ----------IIY-NGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGA 223 (740)
T ss_dssp ----------TEE-ESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTS
T ss_pred ----------cee-cCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcC
Confidence 000 1111 2235688999999888765321
Q ss_pred -----cEEEeCCCC---e---EEEEecc------CCCcEEEEEEEcCCceEEEEeC----CCcEEEEEccCCCc----ce
Q psy710 190 -----SLRLLGRPG---V---DAHVRHE------TDAAVIQMQFLTNEGALITATA----DDSLHLWNFRQKRP----EI 244 (591)
Q Consensus 190 -----~i~i~d~~~---~---~~~~~~~------~~~~v~~~~~~~~~~~l~~~~~----d~~i~~wd~~~~~~----~~ 244 (591)
.|++||+.+ + +...... +...+..++|+|||+.++.... +..|.+||+.+++. ..
T Consensus 224 ~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~ 303 (740)
T 4a5s_A 224 VNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLV 303 (740)
T ss_dssp CCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECG
T ss_pred cCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeE
Confidence 478889887 5 4433322 4557899999999997665532 23699999988741 11
Q ss_pred EEee--eeccccEE-----EEEecCCCCEEE-EEeC-Cc--cEEEEEccCccccceeeehhhhccccccCCCCCeEEEec
Q psy710 245 VHSL--KFQRERIT-----YIHLPLQSKWLY-VGTE-KG--NIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSD 313 (591)
Q Consensus 245 ~~~~--~~~~~~v~-----~~~~sp~~~~l~-~~~~-dg--~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 313 (591)
+..+ ..+...+. ...|+|||+.++ ..+. +| .|++||+.+++.. .+......+..+..
T Consensus 304 ~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~~------------~lT~g~~~v~~~~~ 371 (740)
T 4a5s_A 304 ARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCT------------FITKGTWEVIGIEA 371 (740)
T ss_dssp GGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSSCE------------ESCCSSSCEEEEEE
T ss_pred EEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCceE------------ecccCCEEEEEEEE
Confidence 1111 33444443 678999999877 6653 33 6888888876542 23333455655543
Q ss_pred CCCCCCeEEEEEcC-----C--EEEEEecccceEEEEec-----cCCCeeEEEEeecCCEEEEEecC---CcEEEEecCC
Q psy710 314 NPLDPSKLLLAYET-----G--LVVHWDLKLKRAEFRWQ-----CSEPIKSVCWHYEGKQFLCSHTD---GTISTWAVRP 378 (591)
Q Consensus 314 sp~~~~~l~~~~~d-----g--~i~iwd~~~~~~~~~~~-----~~~~v~~~~~sp~g~~l~s~~~d---g~i~vwd~~~ 378 (591)
+ |++.|+..+.. + .|+..++.++.....+. .......+.|+|++++++..... ..+.+++..
T Consensus 372 -~-d~~~i~f~~~~~~~~~~~~~ly~v~~~g~~~~~~lt~~~~~~~~~~~~~~~S~dg~~~~~~~s~~~~p~~~l~~~~- 448 (740)
T 4a5s_A 372 -L-TSDYLYYISNEYKGMPGGRNLYKIQLIDYTKVTCLSCELNPERCQYYSVSFSKEAKYYQLRCSGPGLPLYTLHSSV- 448 (740)
T ss_dssp -E-CSSEEEEEESCGGGCTTCBEEEEEETTEEEEEEESSTTTSTTTBCBEEEEECTTSSEEEEEECSBSSCEEEEEETT-
T ss_pred -E-eCCEEEEEEecCCCCCceeEEEEEECCCCCcceeeccccCCCCCceEEEEECCCCCEEEEEeCCCCCCEEEEEECC-
Confidence 5 56666665443 3 45555555555443343 23578899999999988766543 357888877
Q ss_pred CCCceeee
Q psy710 379 LAKPVSVN 386 (591)
Q Consensus 379 ~~~~~~~~ 386 (591)
.++.+..+
T Consensus 449 ~~~~~~~l 456 (740)
T 4a5s_A 449 NDKGLRVL 456 (740)
T ss_dssp TTEEEEEE
T ss_pred CCcEEEEe
Confidence 55544444
No 154
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.91 E-value=1e-21 Score=191.23 Aligned_cols=312 Identities=10% Similarity=0.042 Sum_probs=204.1
Q ss_pred EEeCCCCcEEEEEeC----CCcEEEEcCC--CceeEee-ccCCcceEEEEEeecCCEEEEecCC----CeEEEEeecc--
Q psy710 13 IAFDPIQKLLAIGTK----TGSLRLLGRP--GVDAHVR-HETDAAVIQMQFLTNEGALITATAD----DSLHLWNFRQ-- 79 (591)
Q Consensus 13 ~~~spdg~~la~g~~----dg~i~lw~~~--~~~~~~~-~~h~~~v~~l~~sp~~~~l~s~~~d----~~i~vw~~~~-- 79 (591)
.+..+...++++|+. ++.|.+|+++ ...+..+ ..+...+..++|+||+++|++++.+ +.|.+|+++.
T Consensus 7 ~~~~~~~~~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~~~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~ 86 (361)
T 3scy_A 7 PSTTDSELTMLVGTYTSGNSKGIYTFRFNEETGESLPLSDAEVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEK 86 (361)
T ss_dssp CCGGGGEEEEEEEECCSSSCCEEEEEEEETTTCCEEEEEEEECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTT
T ss_pred hhhCCCceEEEEEeccCCCCCCEEEEEEeCCCCCEEEeecccCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCC
Confidence 344555667777854 5689999764 2222211 1166778889999999999998875 7999999976
Q ss_pred cCceeeeEEEeeccceEEEEeeCCceEEEEEe-CCCcEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCc
Q psy710 80 KRPEIVHSLKFQRERITYIHLPLQSKWLYVGT-EKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDP 158 (591)
Q Consensus 80 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (591)
++.+.+.....+......+++ ++++|++++ .++.|.+|++........+....... ......
T Consensus 87 g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~---------------g~~~~~ 149 (361)
T 3scy_A 87 GTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFK---------------GSGPDK 149 (361)
T ss_dssp TEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECC---------------CCCSCT
T ss_pred CcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEcc---------------CCCCCc
Confidence 332334444445556777877 788777776 47899999997532221111000000 000000
Q ss_pred ceeeeccCCCCceEEEECCCCCEEEEEe-CCCcEEEeCCCCeE--------------EEEeccCCCcEEEEEEEcCCceE
Q psy710 159 SKTFRHGFPYQPTAIAFDPIQKLLAIGT-KTGSLRLLGRPGVD--------------AHVRHETDAAVIQMQFLTNEGAL 223 (591)
Q Consensus 159 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~--------------~~~~~~~~~~v~~~~~~~~~~~l 223 (591)
...+...+.+++|+|++++++++. .++.|.+|++.... .............++|+|+|+++
T Consensus 150 ----~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l 225 (361)
T 3scy_A 150 ----ERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFA 225 (361)
T ss_dssp ----TTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEE
T ss_pred ----cccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEE
Confidence 001233468899999999766655 47899999765321 12223334578899999999988
Q ss_pred EEEe-CCCcEEEEEccCCCcceEEeeee---ccccEEEEEecCCCCEEEEEeCC--ccEEEEEcc--Cccccceeeehhh
Q psy710 224 ITAT-ADDSLHLWNFRQKRPEIVHSLKF---QRERITYIHLPLQSKWLYVGTEK--GNIHVVNIE--SFTLSGYIINWNK 295 (591)
Q Consensus 224 ~~~~-~d~~i~~wd~~~~~~~~~~~~~~---~~~~v~~~~~sp~~~~l~~~~~d--g~i~i~d~~--~~~~~~~~~~~~~ 295 (591)
++++ .++.|.+|++.++....+..+.. +......++|+|||++|+++..+ +.|.+|++. +++...
T Consensus 226 ~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~------- 298 (361)
T 3scy_A 226 YLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTK------- 298 (361)
T ss_dssp EEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEE-------
T ss_pred EEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEE-------
Confidence 7776 68999999998663333333322 23446899999999999777665 789999996 333210
Q ss_pred hccccccCCCCCeEEEecCCCCCCeEEEEE-cCCEEEEE--ecccceEEEEec--cCCCeeEEEEe
Q psy710 296 AIDVCMKTHPGPIIHLSDNPLDPSKLLLAY-ETGLVVHW--DLKLKRAEFRWQ--CSEPIKSVCWH 356 (591)
Q Consensus 296 ~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~-~dg~i~iw--d~~~~~~~~~~~--~~~~v~~~~~s 356 (591)
...... ...+..++|+| ++++|++++ .++.|.+| |..++++..... +...+.|++|.
T Consensus 299 --~~~~~~-g~~~~~~~~sp-dg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~~~~p~~v~~~ 360 (361)
T 3scy_A 299 --VGYQLT-GIHPRNFIITP-NGKYLLVACRDTNVIQIFERDQATGLLTDIKKDIKVDKPVCLKFV 360 (361)
T ss_dssp --EEEEEC-SSCCCEEEECT-TSCEEEEEETTTTEEEEEEECTTTCCEEECSCCEECSSEEEEEEE
T ss_pred --eeEecC-CCCCceEEECC-CCCEEEEEECCCCCEEEEEEECCCCcEeecceeeeCCCCeEEEEc
Confidence 111222 45677899999 999998887 57899996 555777665542 45678888886
No 155
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.91 E-value=1.3e-22 Score=216.92 Aligned_cols=309 Identities=9% Similarity=0.057 Sum_probs=211.6
Q ss_pred CCcEEEeCCCCcEEEEEeCC---------CcEEEEcCCCceeEeec---cCCcceEEEEEeecCCEEEEecCCCeEEEEe
Q psy710 9 QPTAIAFDPIQKLLAIGTKT---------GSLRLLGRPGVDAHVRH---ETDAAVIQMQFLTNEGALITATADDSLHLWN 76 (591)
Q Consensus 9 ~v~~~~~spdg~~la~g~~d---------g~i~lw~~~~~~~~~~~---~h~~~v~~l~~sp~~~~l~s~~~d~~i~vw~ 76 (591)
.|.+++|||||++||+++.+ +.+.+||+.+.....+. .|...+..++|||||++|++++. +.|++|+
T Consensus 62 ~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~ 140 (723)
T 1xfd_A 62 RAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCA 140 (723)
T ss_dssp TCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEES
T ss_pred ccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCccccccccccEECCCCCEEEEEEC-CeEEEEE
Confidence 49999999999999999764 78889999855544443 44556889999999999999876 8999999
Q ss_pred ecccCceeeeEEEeeccc------------------eEEEEeeCCceEEEEEeCC-CcEEEEEeeeeeeeceeccccccc
Q psy710 77 FRQKRPEIVHSLKFQRER------------------ITYIHLPLQSKWLYVGTEK-GNIHVVNIESFTLSGYIINWNKAI 137 (591)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~------------------v~~~~~~~~~~~l~~~~~d-~~i~vwd~~~~~~~~~~~~~~~~~ 137 (591)
+.+++. ......+... +.+++|+|||+.|++++.+ +.+.+|++.....
T Consensus 141 ~~~g~~--~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~----------- 207 (723)
T 1xfd_A 141 HVGKQA--IRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTG----------- 207 (723)
T ss_dssp SSSSCC--EEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSS-----------
T ss_pred CCCCce--EEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCC-----------
Confidence 998753 3323332222 3789999999999988764 4677777643110
Q ss_pred ccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCCCCEEEEEeCCCcEEEeCCCCeEE-EEeccC------CCc
Q psy710 138 DVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGVDA-HVRHET------DAA 210 (591)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~-~~~~~~------~~~ 210 (591)
.....+..+.|.++|.. ..+..|++||+.+.+. .....+ ...
T Consensus 208 ---------------------------~~~~~~~~~~~~~~G~~----~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~ 256 (723)
T 1xfd_A 208 ---------------------------SIYPTVKPYHYPKAGSE----NPSISLHVIGLNGPTHDLEMMPPDDPRMREYY 256 (723)
T ss_dssp ---------------------------SSSCCCEEEECCBTTSC----CCEEEEEEEESSSSCCCEECCCCCCGGGSSEE
T ss_pred ---------------------------cCCCcceeccCCCCCCC----CCeeEEEEEECCCCceeEEeeCCccCCCccce
Confidence 01123678888887752 3345799999987764 222221 457
Q ss_pred EEEEEEEcCCceEEEEeC----CCcEEEEEccCCCcceEEeeee-ccccE----EEEEecCCCCEEEE--EeCCc-----
Q psy710 211 VIQMQFLTNEGALITATA----DDSLHLWNFRQKRPEIVHSLKF-QRERI----TYIHLPLQSKWLYV--GTEKG----- 274 (591)
Q Consensus 211 v~~~~~~~~~~~l~~~~~----d~~i~~wd~~~~~~~~~~~~~~-~~~~v----~~~~~sp~~~~l~~--~~~dg----- 274 (591)
+..++|+|||+++++... +..|++||+.++ +....+.. +...+ ..++|+|||+.|+. +..++
T Consensus 257 ~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g--~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~ 334 (723)
T 1xfd_A 257 ITMVKWATSTKVAVTWLNRAQNVSILTLCDATTG--VCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKF 334 (723)
T ss_dssp EEEEEESSSSEEEEEEEETTSCEEEEEEEETTTC--CEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCE
T ss_pred eEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCC--cceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcce
Confidence 899999999998876643 357999999887 44444433 22333 37899999997775 44566
Q ss_pred -cEEEEE-ccCcc---ccceeeehhhhccccccCCCCCeEE-EecCCCCCCeEEEEEcC---CEEEEEecccce--EEEE
Q psy710 275 -NIHVVN-IESFT---LSGYIINWNKAIDVCMKTHPGPIIH-LSDNPLDPSKLLLAYET---GLVVHWDLKLKR--AEFR 343 (591)
Q Consensus 275 -~i~i~d-~~~~~---~~~~~~~~~~~~~~~~~~~~~~v~~-~~~sp~~~~~l~~~~~d---g~i~iwd~~~~~--~~~~ 343 (591)
.|++|| ..++. .. .+..+...+.. ++|+| |++.|+..+.+ +.+++|++.... ....
T Consensus 335 ~~l~~~d~~~~~~~~~~~------------~l~~~~~~~~~~~~~sp-dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~ 401 (723)
T 1xfd_A 335 YHITVSSSQPNSSNDNIQ------------SITSGDWDVTKILAYDE-KGNKIYFLSTEDLPRRRQLYSANTVGNFNRQC 401 (723)
T ss_dssp EEEEEECSSCCSSSCCCC------------BSCCSSSCEEEEEEEET-TTTEEEEEESSSCTTCCEEEEECSSTTCCCBC
T ss_pred eEEEEEeccCCCCcccee------------EeecCCeEEEeeeEEcC-CCCEEEEEEcCCCCcceEEEEEeCCCCCCcce
Confidence 566677 34433 21 23333344554 69999 99999876665 789999986432 2222
Q ss_pred ec----cCCCeeEEEEeecCCEEEEEecC-C--cEEEEecC
Q psy710 344 WQ----CSEPIKSVCWHYEGKQFLCSHTD-G--TISTWAVR 377 (591)
Q Consensus 344 ~~----~~~~v~~~~~sp~g~~l~s~~~d-g--~i~vwd~~ 377 (591)
+. +...+..++|+|||++|+..... + ...+++..
T Consensus 402 l~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~p~~~~~~~~ 442 (723)
T 1xfd_A 402 LSCDLVENCTYFSASFSHSMDFFLLKCEGPGVPMVTVHNTT 442 (723)
T ss_dssp SSTTSSSSCCCCEEEECTTSSEEEEECCSSSSCCEEEEETT
T ss_pred ecccccCCCCeEEEEECCCCCEEEEEccCCCCCeEEEEECC
Confidence 32 46678999999999988876432 2 24455654
No 156
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.90 E-value=7e-23 Score=218.57 Aligned_cols=297 Identities=9% Similarity=0.060 Sum_probs=208.0
Q ss_pred EEEEeecCCEEEEecCCCeEEEEeecccCceeeeEEEeecc---ceEEEEeeCCceEEEEEeC---------CCcEEEEE
Q psy710 53 QMQFLTNEGALITATADDSLHLWNFRQKRPEIVHSLKFQRE---RITYIHLPLQSKWLYVGTE---------KGNIHVVN 120 (591)
Q Consensus 53 ~l~~sp~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~~~~~---------d~~i~vwd 120 (591)
+++|+|++++++++ .|++|++||+.+++ ....+..+.. .+.+++|||||++|++++. ++.|++||
T Consensus 20 ~~~~s~dg~~~~~~-~d~~i~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d 96 (719)
T 1z68_A 20 FPNWISGQEYLHQS-ADNNIVLYNIETGQ--SYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYD 96 (719)
T ss_dssp CCEESSSSEEEEEC-TTSCEEEEESSSCC--EEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEE
T ss_pred ccEECCCCeEEEEc-CCCCEEEEEcCCCc--EEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEE
Confidence 67999999655554 69999999999885 3444444433 3899999999999998876 68999999
Q ss_pred eeeeeeeceecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCCCCEEEEEeCCCcEEEeCCCCeE
Q psy710 121 IESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGVD 200 (591)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~ 200 (591)
+.+++...... ....+..++|+|||+.||.+. ++.|++|++.+++
T Consensus 97 ~~~g~~~~~~~----------------------------------l~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~ 141 (719)
T 1z68_A 97 LSNGEFVRGNE----------------------------------LPRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDP 141 (719)
T ss_dssp TTTTEECCSSC----------------------------------CCSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSC
T ss_pred CCCCcccccee----------------------------------cCcccccceECCCCCEEEEEE-CCeEEEEeCCCCC
Confidence 98876421000 113467899999999999886 7899999998776
Q ss_pred EEEeccC--CCcE-----------------EEEEEEcCCceEEEEeCCC-------------------------------
Q psy710 201 AHVRHET--DAAV-----------------IQMQFLTNEGALITATADD------------------------------- 230 (591)
Q Consensus 201 ~~~~~~~--~~~v-----------------~~~~~~~~~~~l~~~~~d~------------------------------- 230 (591)
....... ...+ .+++|+|||++|++++.|.
T Consensus 142 ~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~ 221 (719)
T 1z68_A 142 PFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKN 221 (719)
T ss_dssp CEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCC
T ss_pred cEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCC
Confidence 5543211 1112 4899999999999887552
Q ss_pred ---cEEEEEccCCCcc---eE---EeeeeccccEEEEEecCCCCEEEEEeCC----ccEEEEE----ccCccccceeeeh
Q psy710 231 ---SLHLWNFRQKRPE---IV---HSLKFQRERITYIHLPLQSKWLYVGTEK----GNIHVVN----IESFTLSGYIINW 293 (591)
Q Consensus 231 ---~i~~wd~~~~~~~---~~---~~~~~~~~~v~~~~~sp~~~~l~~~~~d----g~i~i~d----~~~~~~~~~~~~~ 293 (591)
.|++||+.+++.. .+ ..+..|...+..++|+||++++++.... ..|.+|| +.+++..
T Consensus 222 ~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~------ 295 (719)
T 1z68_A 222 PVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCP------ 295 (719)
T ss_dssp CEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECC------
T ss_pred CeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceE------
Confidence 7889999876211 11 1133567789999999998877764432 2488899 7766553
Q ss_pred hhhccccc----cCCCCCeE-----EEecCCCCCCeEEE--EEcCC--EEEEEecccceEEEEeccCCCeeEEEEeecCC
Q psy710 294 NKAIDVCM----KTHPGPII-----HLSDNPLDPSKLLL--AYETG--LVVHWDLKLKRAEFRWQCSEPIKSVCWHYEGK 360 (591)
Q Consensus 294 ~~~~~~~~----~~~~~~v~-----~~~~sp~~~~~l~~--~~~dg--~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~g~ 360 (591)
... ..|...+. .+.|+| |++.|+. +..++ .|++||+.+++......+...+..+.++ +++
T Consensus 296 -----~~~~~~~~~~~~~~~~~~~~~~~~sp-dg~~l~~~~~~~~g~~~l~~~~~~~~~~~~lt~~~~~v~~~~~~-d~~ 368 (719)
T 1z68_A 296 -----KTQEHIEESRTGWAGGFFVSTPVFSY-DAISYYKIFSDKDGYKHIHYIKDTVENAIQITSGKWEAINIFRV-TQD 368 (719)
T ss_dssp -----GGGEEEEECSSSCSSSSSCCCCEECT-TSSCEEEEEECTTSCEEEEEESSCSTTCEECSCSSSCEEEEEEE-CSS
T ss_pred -----EEEecccccCCceEccccCCccEECC-CCCeEEEEEEccCCceEEEEEECCCCceEecccCceEEEEEEEE-eCC
Confidence 122 35666665 789999 9997665 33444 6788888887755444456668888888 888
Q ss_pred EEEEEecC-----CcEEEEecCCC-CC-ceeeecc----cccccCCCCCCCCCcceEEEEee
Q psy710 361 QFLCSHTD-----GTISTWAVRPL-AK-PVSVNQP----HIKTNKDGKLEQCKPIQKVEWKH 411 (591)
Q Consensus 361 ~l~s~~~d-----g~i~vwd~~~~-~~-~~~~~~~----~~~~~~~~~~~~~~~i~~~~~~~ 411 (591)
.|+..+.+ +..++|.+... +. ....+.. + ...+..+.|+|
T Consensus 369 ~i~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~l~~~~~~~-----------~~~~~~~~~s~ 419 (719)
T 1z68_A 369 SLFYSSNEFEEYPGRRNIYRISIGSYPPSKKCVTCHLRKE-----------RCQYYTASFSD 419 (719)
T ss_dssp EEEEEESCGGGCTTCBEEEEEECSSSSCCEEESSTTTTTT-----------TBCBEEEEECG
T ss_pred EEEEEEecCCCCCceEEEEEEeCCCCCCCceeccCccCCC-----------CCceEEEEECC
Confidence 87777665 88999998742 32 1233322 3 45677888987
No 157
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.90 E-value=9e-22 Score=190.63 Aligned_cols=283 Identities=7% Similarity=-0.036 Sum_probs=191.8
Q ss_pred cEEEeCCCCcEEEEEeCCCcEEEEcCC-CceeEeeccCC-cceEEEEEeecCCEEE-EecCCCeEEEEeecccCceeeeE
Q psy710 11 TAIAFDPIQKLLAIGTKTGSLRLLGRP-GVDAHVRHETD-AAVIQMQFLTNEGALI-TATADDSLHLWNFRQKRPEIVHS 87 (591)
Q Consensus 11 ~~~~~spdg~~la~g~~dg~i~lw~~~-~~~~~~~~~h~-~~v~~l~~sp~~~~l~-s~~~d~~i~vw~~~~~~~~~~~~ 87 (591)
+.++++++++++++++.++.|++||.. +.....+..+. ..+..++|+|++++++ +...++.|.+||+.+++ ....
T Consensus 3 ~g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~--~~~~ 80 (349)
T 1jmx_B 3 TGPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCK--NTFH 80 (349)
T ss_dssp -CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTE--EEEE
T ss_pred ccccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCc--EEEE
Confidence 356789999999999999999999987 44445554433 2578899999998665 55578999999998874 4444
Q ss_pred EEee------ccceEEEEeeCCceEEEEEeCC------------CcEEEEEeeeeeeeceecccccccccCCCCCCCcee
Q psy710 88 LKFQ------RERITYIHLPLQSKWLYVGTEK------------GNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPII 149 (591)
Q Consensus 88 ~~~~------~~~v~~~~~~~~~~~l~~~~~d------------~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (591)
+..+ ...+..++|+|+++++++++.+ +.|.+||+.+++....+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~------------------ 142 (349)
T 1jmx_B 81 ANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVR------------------ 142 (349)
T ss_dssp EESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSE------------------
T ss_pred EEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceee------------------
Confidence 4432 2237889999999999998865 899999998754322111
Q ss_pred ccCCCCcCcceeeeccCCCCceEEEECCCCCEEEEEeCCCcEEEeCCCCeEEEEeccCCC--------------------
Q psy710 150 HLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGVDAHVRHETDA-------------------- 209 (591)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-------------------- 209 (591)
.. .++..+.+++|+|+++ +++++ +.|++||..+.+.........
T Consensus 143 -----------~~--~~~~~~~~~~~s~dg~-l~~~~--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (349)
T 1jmx_B 143 -----------TF--PMPRQVYLMRAADDGS-LYVAG--PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSP 206 (349)
T ss_dssp -----------EE--ECCSSCCCEEECTTSC-EEEES--SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCT
T ss_pred -----------ec--cCCCcccceeECCCCc-EEEcc--CcEEEEeCCCCceeccccccccCCccccCccceeeecCCCc
Confidence 11 1234578999999999 55554 449999998876654332211
Q ss_pred -----cEEEEEEEcCCceEEEEe-CCCcEEEEEccCCCcceEEeeeeccccEEEEEecC-CCCEEEEEeCCccEEEEEcc
Q psy710 210 -----AVIQMQFLTNEGALITAT-ADDSLHLWNFRQKRPEIVHSLKFQRERITYIHLPL-QSKWLYVGTEKGNIHVVNIE 282 (591)
Q Consensus 210 -----~v~~~~~~~~~~~l~~~~-~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~sp-~~~~l~~~~~dg~i~i~d~~ 282 (591)
....+++++++....... ....+..++..+++. ....+..+...+..++++| ++++++++ ++.|.+||+.
T Consensus 207 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~ 283 (349)
T 1jmx_B 207 RHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKT-HTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLK 283 (349)
T ss_dssp TCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCE-EEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETT
T ss_pred ceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcE-EecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECc
Confidence 234455555442111000 001122245554432 1222233456788999999 99999988 7899999999
Q ss_pred CccccceeeehhhhccccccCCCCCeEEEecCCCCCCeEEEEEcCCEEEEEecccceEEEEec
Q psy710 283 SFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKLLLAYETGLVVHWDLKLKRAEFRWQ 345 (591)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 345 (591)
+++... .+. ....+.+++|+| ++++|++++.++.|++||+.+++.+..+.
T Consensus 284 ~~~~~~-----------~~~-~~~~~~~~~~s~-dg~~l~~~~~~~~v~v~d~~~~~~~~~~~ 333 (349)
T 1jmx_B 284 QRKLIK-----------AAN-LDHTYYCVAFDK-KGDKLYLGGTFNDLAVFNPDTLEKVKNIK 333 (349)
T ss_dssp TTEEEE-----------EEE-CSSCCCEEEECS-SSSCEEEESBSSEEEEEETTTTEEEEEEE
T ss_pred cCeEEE-----------EEc-CCCCccceEECC-CCCEEEEecCCCeEEEEeccccceeeeee
Confidence 876531 111 223467899999 99999988889999999999998887765
No 158
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.90 E-value=3.4e-20 Score=180.34 Aligned_cols=298 Identities=10% Similarity=0.056 Sum_probs=197.0
Q ss_pred CEEEEe----cCCCeEEEEeecc--cCceeeeEEEeeccceEEEEeeCCceEEEEEeCC----CcEEEEEeee--eeeec
Q psy710 61 GALITA----TADDSLHLWNFRQ--KRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEK----GNIHVVNIES--FTLSG 128 (591)
Q Consensus 61 ~~l~s~----~~d~~i~vw~~~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----~~i~vwd~~~--~~~~~ 128 (591)
.+++.| +.++.|.+|+++. ++...+... +...+..++|+|++++|++++.+ +.|.+|++.. ++...
T Consensus 14 ~~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~~--~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~ 91 (361)
T 3scy_A 14 LTMLVGTYTSGNSKGIYTFRFNEETGESLPLSDA--EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHL 91 (361)
T ss_dssp EEEEEEECCSSSCCEEEEEEEETTTCCEEEEEEE--ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEE
T ss_pred eEEEEEeccCCCCCCEEEEEEeCCCCCEEEeecc--cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEE
Confidence 455555 3467899998864 432233333 66778889999999999999885 7999999876 33221
Q ss_pred eecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCCCCEEEEEe-CCCcEEEeCCCCeEEE-----
Q psy710 129 YIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGT-KTGSLRLLGRPGVDAH----- 202 (591)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~----- 202 (591)
... . ..+...+..+++ ++++++++. .++.|.+|++......
T Consensus 92 ~~~------------------------------~-~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~ 138 (361)
T 3scy_A 92 LNT------------------------------Q-KTMGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASD 138 (361)
T ss_dssp EEE------------------------------E-ECSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSE
T ss_pred eeE------------------------------e-ccCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccce
Confidence 111 0 012334567777 777777666 5789999997532211
Q ss_pred -EeccC---------CCcEEEEEEEcCCceEEEEe-CCCcEEEEEccCCCc----c-e------EEeeeeccccEEEEEe
Q psy710 203 -VRHET---------DAAVIQMQFLTNEGALITAT-ADDSLHLWNFRQKRP----E-I------VHSLKFQRERITYIHL 260 (591)
Q Consensus 203 -~~~~~---------~~~v~~~~~~~~~~~l~~~~-~d~~i~~wd~~~~~~----~-~------~~~~~~~~~~v~~~~~ 260 (591)
..+.. ...+.+++|+|+|+++++++ .++.|.+|++..... + . ..........+..++|
T Consensus 139 ~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 218 (361)
T 3scy_A 139 VIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIF 218 (361)
T ss_dssp EEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEE
T ss_pred eEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEE
Confidence 11111 22457899999999776655 478999999986532 1 1 1111223356789999
Q ss_pred cCCCCEEEEEe-CCccEEEEEccCccccceeeehhhhccccccCCCCCeEEEecCCCCCCeEEEEEcC--CEEEEEecc-
Q psy710 261 PLQSKWLYVGT-EKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKLLLAYET--GLVVHWDLK- 336 (591)
Q Consensus 261 sp~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~d--g~i~iwd~~- 336 (591)
+|||+++++++ .++.|.+|++.+++...... ......+......++|+| |+++|+++..+ +.|.+|++.
T Consensus 219 spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~------~~~~~~~~~~~~~i~~sp-dg~~l~v~~~~~~~~i~v~~~~~ 291 (361)
T 3scy_A 219 NSDGKFAYLINEIGGTVIAFRYADGMLDEIQT------VAADTVNAQGSGDIHLSP-DGKYLYASNRLKADGVAIFKVDE 291 (361)
T ss_dssp CTTSSEEEEEETTTCEEEEEEEETTEEEEEEE------EESCSSCCCCEEEEEECT-TSSEEEEEECSSSCEEEEEEECT
T ss_pred cCCCCEEEEEcCCCCeEEEEEecCCceEEeEE------EecCCCCCCCcccEEECC-CCCEEEEECCCCCCEEEEEEEcC
Confidence 99999888777 58899999998765421000 112334445678999999 99998776654 899999996
Q ss_pred -cceE--EEEeccCCCeeEEEEeecCCEEEEEe-cCCcEEEEecCC-CCCceeeecccccccCCCCCCCCCcceEEEEe
Q psy710 337 -LKRA--EFRWQCSEPIKSVCWHYEGKQFLCSH-TDGTISTWAVRP-LAKPVSVNQPHIKTNKDGKLEQCKPIQKVEWK 410 (591)
Q Consensus 337 -~~~~--~~~~~~~~~v~~~~~sp~g~~l~s~~-~dg~i~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 410 (591)
+++. +..+.....+.+++|+|||++|++++ .++.|.+|+++. +++........ ....+.+|.|.
T Consensus 292 ~~g~~~~~~~~~~g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~----------~~~~p~~v~~~ 360 (361)
T 3scy_A 292 TNGTLTKVGYQLTGIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLTDIKKDI----------KVDKPVCLKFV 360 (361)
T ss_dssp TTCCEEEEEEEECSSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEEECSCCE----------ECSSEEEEEEE
T ss_pred CCCcEEEeeEecCCCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEeecceee----------eCCCCeEEEEc
Confidence 4443 33333456788999999999998887 678999987763 34433322111 03457788875
No 159
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.90 E-value=3.2e-22 Score=193.82 Aligned_cols=289 Identities=10% Similarity=0.030 Sum_probs=195.8
Q ss_pred EEEEeecCCEEEEecCCCeEEEEeecccCceeeeEEEeec-cceEEEEeeCCceEEEEE-eCCCcEEEEEeeeeeeecee
Q psy710 53 QMQFLTNEGALITATADDSLHLWNFRQKRPEIVHSLKFQR-ERITYIHLPLQSKWLYVG-TEKGNIHVVNIESFTLSGYI 130 (591)
Q Consensus 53 ~l~~sp~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~-~~d~~i~vwd~~~~~~~~~~ 130 (591)
.++++++++++++++.+++|.+||..+++ .+..+..+. ..+..++|+|+++.++++ ..++.|.+||+.+++....+
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~--~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~ 81 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDT--VYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHA 81 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTE--EEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCc--EEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEE
Confidence 35678888899999999999999998873 555665443 157889999999866544 46899999999887765544
Q ss_pred cccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCCCCEEEEEeCC------------CcEEEeCCCC
Q psy710 131 INWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTKT------------GSLRLLGRPG 198 (591)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d------------g~i~i~d~~~ 198 (591)
....... .....+..++|+|+++++++++.+ +.|.+||+.+
T Consensus 82 ~~~~~~~---------------------------~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~ 134 (349)
T 1jmx_B 82 NLSSVPG---------------------------EVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTAD 134 (349)
T ss_dssp ESCCSTT---------------------------EEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGG
T ss_pred Ecccccc---------------------------cccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCC
Confidence 3100000 001236789999999999988865 8999999876
Q ss_pred eE---EEEeccCCCcEEEEEEEcCCceEEEEeCCCcEEEEEccCCCcceEEeeeecc-----------------------
Q psy710 199 VD---AHVRHETDAAVIQMQFLTNEGALITATADDSLHLWNFRQKRPEIVHSLKFQR----------------------- 252 (591)
Q Consensus 199 ~~---~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~----------------------- 252 (591)
.+ ..........+.+++|+|+++ +++++ +.|.+||..++ +.+..+..+.
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~s~dg~-l~~~~--~~i~~~d~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (349)
T 1jmx_B 135 GLEAKPVRTFPMPRQVYLMRAADDGS-LYVAG--PDIYKMDVKTG--KYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHE 209 (349)
T ss_dssp GGGBCCSEEEECCSSCCCEEECTTSC-EEEES--SSEEEECTTTC--CEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCE
T ss_pred ccccceeeeccCCCcccceeECCCCc-EEEcc--CcEEEEeCCCC--ceeccccccccCCccccCccceeeecCCCccee
Confidence 32 222222334688899999999 66654 44999999887 4555544321
Q ss_pred -ccEEEEEecCCCCEEEEEeCCc-cEEEEEccCccccceeeehhhhccccccCCCCCeEEEecCCCCCCeEEEEEcCCEE
Q psy710 253 -ERITYIHLPLQSKWLYVGTEKG-NIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKLLLAYETGLV 330 (591)
Q Consensus 253 -~~v~~~~~sp~~~~l~~~~~dg-~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i 330 (591)
.....+++++++.......... .+..++..+++... .....+...+..++|+|.++++++++ ++.|
T Consensus 210 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v 277 (349)
T 1jmx_B 210 FSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHT----------QEFADLTELYFTGLRSPKDPNQIYGV--LNRL 277 (349)
T ss_dssp EEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEE----------EEEEECSSCEEEEEECSSCTTEEEEE--ESEE
T ss_pred EEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEe----------cccccCCCcceeeEecCCCCCEEEEE--cCeE
Confidence 0344566665542211100011 12224444443311 11122455688999998567778777 8899
Q ss_pred EEEecccceEEEEeccCCCeeEEEEeecCCEEEEEecCCcEEEEecCCCCCceeeecc
Q psy710 331 VHWDLKLKRAEFRWQCSEPIKSVCWHYEGKQFLCSHTDGTISTWAVRPLAKPVSVNQP 388 (591)
Q Consensus 331 ~iwd~~~~~~~~~~~~~~~v~~~~~sp~g~~l~s~~~dg~i~vwd~~~~~~~~~~~~~ 388 (591)
++||+.+++....+.....+.+++|+|+|++|++++.++.|++||+. +++.+..+..
T Consensus 278 ~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~v~v~d~~-~~~~~~~~~~ 334 (349)
T 1jmx_B 278 AKYDLKQRKLIKAANLDHTYYCVAFDKKGDKLYLGGTFNDLAVFNPD-TLEKVKNIKL 334 (349)
T ss_dssp EEEETTTTEEEEEEECSSCCCEEEECSSSSCEEEESBSSEEEEEETT-TTEEEEEEEC
T ss_pred EEEECccCeEEEEEcCCCCccceEECCCCCEEEEecCCCeEEEEecc-ccceeeeeec
Confidence 99999999998888766778999999999999888889999999998 6666665543
No 160
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.88 E-value=1.9e-20 Score=185.48 Aligned_cols=242 Identities=12% Similarity=0.129 Sum_probs=170.8
Q ss_pred CCCCcEEEeCCCCcEEEEEeCCCcEEEEcCCC-----------ceeE-----eeccCCcceEEEEEeecCCEEE----Ee
Q psy710 7 PYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPG-----------VDAH-----VRHETDAAVIQMQFLTNEGALI----TA 66 (591)
Q Consensus 7 ~~~v~~~~~spdg~~la~g~~dg~i~lw~~~~-----------~~~~-----~~~~h~~~v~~l~~sp~~~~l~----s~ 66 (591)
...++.+++++++.++++++.++ +++|+... .... ....|...|.+++|+|++++|+ ++
T Consensus 36 ~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~sg 114 (434)
T 2oit_A 36 KERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSS 114 (434)
T ss_dssp CSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEET
T ss_pred CCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEecc
Confidence 44689999999999999999888 88876321 0111 1123567899999999999999 78
Q ss_pred cCCCeEEEEeeccc-----Cc----eeeeEEEeeccceEEEEeeCC-ceEEEEEeCCCcEEEEEeeeeeeeceecccccc
Q psy710 67 TADDSLHLWNFRQK-----RP----EIVHSLKFQRERITYIHLPLQ-SKWLYVGTEKGNIHVVNIESFTLSGYIINWNKA 136 (591)
Q Consensus 67 ~~d~~i~vw~~~~~-----~~----~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~ 136 (591)
+.|++|++||+.++ +. .....+.+|...|.+++|+|+ +++|++++.||+|++||++++......
T Consensus 115 s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~------ 188 (434)
T 2oit_A 115 EYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCAT------ 188 (434)
T ss_dssp TTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEE------
T ss_pred CCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeec------
Confidence 89999999999765 11 124556679999999999998 789999999999999999886433222
Q ss_pred cccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCCCCEEEEEeCCCcEEEeCCCCeEEEEecc-------CCC
Q psy710 137 IDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGVDAHVRHE-------TDA 209 (591)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-------~~~ 209 (591)
.+|...|.+++|+|++++|++|+.||.|++||.+......... +..
T Consensus 189 ---------------------------~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~ 241 (434)
T 2oit_A 189 ---------------------------LPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPTLQEKKVIPCPPFYESDHPV 241 (434)
T ss_dssp ---------------------------ECGGGCEEEEEECTTSSCEEEEETTSCEEEECTTCCEEEEECCCTTCCTTSCE
T ss_pred ---------------------------cCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccCCcccccccCCcccCCCCce
Confidence 2356678999999999999999999999999998433322211 123
Q ss_pred cEEEEEEEcCCceEEEE-eCCC------cEEEEEccCCCc---ceEEeee-------eccccEEEEEecCCCCEEEEEeC
Q psy710 210 AVIQMQFLTNEGALITA-TADD------SLHLWNFRQKRP---EIVHSLK-------FQRERITYIHLPLQSKWLYVGTE 272 (591)
Q Consensus 210 ~v~~~~~~~~~~~l~~~-~~d~------~i~~wd~~~~~~---~~~~~~~-------~~~~~v~~~~~sp~~~~l~~~~~ 272 (591)
.+.+++|++++.++++. ..+| .+++|+++..+. .....+. +...+...+..-++.+++++++.
T Consensus 242 ~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~dw~l~~v~s~ 321 (434)
T 2oit_A 242 RVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKKEEKHPEIFVNFMEPCYGSCTERQHHYYLSYIEEWDLVLAASA 321 (434)
T ss_dssp EEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCTTTCCCCEEEECCCSSCCCCSSSCCCEEEEEEGGGTEEEEEET
T ss_pred eEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccCCCCCCcceEecccCCCCCCCCcCcceeeehhccCCEEEEecC
Confidence 89999999998877554 3343 389999986531 1222221 11122223333366676666554
Q ss_pred -CccEEEEEcc
Q psy710 273 -KGNIHVVNIE 282 (591)
Q Consensus 273 -dg~i~i~d~~ 282 (591)
.+.|.++...
T Consensus 322 ~s~dv~vl~~~ 332 (434)
T 2oit_A 322 ASTEVSILARQ 332 (434)
T ss_dssp TCSBCEEEEEC
T ss_pred CCCceeEEEec
Confidence 3456666643
No 161
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.88 E-value=1.3e-21 Score=192.59 Aligned_cols=275 Identities=12% Similarity=0.024 Sum_probs=187.1
Q ss_pred EEEeCCCCcEEEEEeC-CCc--EEEEcCCCceeEee-ccCCcceEEEEEeecCCEEEEecCCCeEEEEeecccCceeeeE
Q psy710 12 AIAFDPIQKLLAIGTK-TGS--LRLLGRPGVDAHVR-HETDAAVIQMQFLTNEGALITATADDSLHLWNFRQKRPEIVHS 87 (591)
Q Consensus 12 ~~~~spdg~~la~g~~-dg~--i~lw~~~~~~~~~~-~~h~~~v~~l~~sp~~~~l~s~~~d~~i~vw~~~~~~~~~~~~ 87 (591)
..+|||||++||.++. +|. |.+||+.+.....+ ..+...+..++|+|||+.|+.++.++.|.+||+.+++. ...
T Consensus 40 ~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~--~~~ 117 (388)
T 3pe7_A 40 QKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEE--NVV 117 (388)
T ss_dssp SCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCE--EEE
T ss_pred CccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcc--eee
Confidence 3789999999998887 664 78888885555444 45555555788999999999999999999999998863 333
Q ss_pred EEeeccceEEEE--eeCCceEEEEEe----------------------CCCcEEEEEeeeeeeeceecccccccccCCCC
Q psy710 88 LKFQRERITYIH--LPLQSKWLYVGT----------------------EKGNIHVVNIESFTLSGYIINWNKAIDVCMKT 143 (591)
Q Consensus 88 ~~~~~~~v~~~~--~~~~~~~l~~~~----------------------~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~ 143 (591)
...+...+.... ++++++.++... .+..|++||+.+++......
T Consensus 118 ~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~------------ 185 (388)
T 3pe7_A 118 YQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQ------------ 185 (388)
T ss_dssp EECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEE------------
T ss_pred eechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeec------------
Confidence 444444444333 489998887432 34678888887765433221
Q ss_pred CCCceeccCCCCcCcceeeeccCCCCceEEEECC-CCCEEEEEeCC------CcEEEeCCCCeEEEEeccCC--CcEEEE
Q psy710 144 HPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDP-IQKLLAIGTKT------GSLRLLGRPGVDAHVRHETD--AAVIQM 214 (591)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d------g~i~i~d~~~~~~~~~~~~~--~~v~~~ 214 (591)
+...+..++|+| +++.|+....+ ..|.+++..+........+. ..+..+
T Consensus 186 ----------------------~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~ 243 (388)
T 3pe7_A 186 ----------------------ENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGESCTHE 243 (388)
T ss_dssp ----------------------ESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTTEEEEEE
T ss_pred ----------------------CCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCCcccccc
Confidence 234568999999 99988877753 37888888776555444443 357889
Q ss_pred EEEcCCceEEEEeC-CC----cEEEEEccCCCcceEEeeeecccc---EEEEEecCCCCEEEEE---------eCCccEE
Q psy710 215 QFLTNEGALITATA-DD----SLHLWNFRQKRPEIVHSLKFQRER---ITYIHLPLQSKWLYVG---------TEKGNIH 277 (591)
Q Consensus 215 ~~~~~~~~l~~~~~-d~----~i~~wd~~~~~~~~~~~~~~~~~~---v~~~~~sp~~~~l~~~---------~~dg~i~ 277 (591)
.|+|||+.|+..+. ++ .|++||+.+++.+.+..+.++... .....|+|||+.|+.. ..+..|+
T Consensus 244 ~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~ 323 (388)
T 3pe7_A 244 FWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLY 323 (388)
T ss_dssp EECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEE
T ss_pred eECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEE
Confidence 99999998866443 22 399999998854444444331111 1113689999988754 4456899
Q ss_pred EEEccCccccceeeehhhhccccccCCCC-----------CeEEEecCCCCCCeEEEEEc-CCEEEEEec
Q psy710 278 VVNIESFTLSGYIINWNKAIDVCMKTHPG-----------PIIHLSDNPLDPSKLLLAYE-TGLVVHWDL 335 (591)
Q Consensus 278 i~d~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~v~~~~~sp~~~~~l~~~~~-dg~i~iwd~ 335 (591)
+||+.+++.. .+..+.. .+..++|+| |++.|+..+. ++...||.+
T Consensus 324 ~~d~~~~~~~------------~l~~~~~~~~~~~~~~~~~~~~~~~sp-Dg~~l~~~s~~~g~~~l~~~ 380 (388)
T 3pe7_A 324 VFNMKNGTQH------------RVARHDTSWKVFEGDRQVTHPHPSFTP-DDKQILFTSDVHGKPALYLA 380 (388)
T ss_dssp EEETTTTEEE------------EEEECCCCCCCBTTBSSTTCCCCEECT-TSSEEEEEECTTSSCEEEEE
T ss_pred EEeccCCceE------------EeccccCcccccccccccCCCCccCCC-CCCEEEEEecCCCceeEEEE
Confidence 9999987652 2222333 477889999 9998887664 666666644
No 162
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.88 E-value=7.1e-21 Score=187.28 Aligned_cols=292 Identities=11% Similarity=0.000 Sum_probs=201.9
Q ss_pred CceeEeeccCCcceEE-----EEEeecCCEEEEecC-CCe--EEEEeecccCceeeeEEEeeccceEEEEeeCCceEEEE
Q psy710 38 GVDAHVRHETDAAVIQ-----MQFLTNEGALITATA-DDS--LHLWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYV 109 (591)
Q Consensus 38 ~~~~~~~~~h~~~v~~-----l~~sp~~~~l~s~~~-d~~--i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 109 (591)
+.....+..|...... .+|+|||++|+.++. ++. |.+||+.+++ ......++...+..+.|+||++.|+.
T Consensus 20 g~~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~--~~~lt~~~~~~~~~~~~spdg~~l~~ 97 (388)
T 3pe7_A 20 GAQVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQV--ATQLTEGRGDNTFGGFLSPDDDALFY 97 (388)
T ss_dssp CCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCE--EEECCCSSCBCSSSCEECTTSSEEEE
T ss_pred CcceEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCc--eEEeeeCCCCCccceEEcCCCCEEEE
Confidence 6777888888776666 899999999998877 674 7777877763 34444445445556789999999999
Q ss_pred EeCCCcEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCce--EEEECCCCCEEEEEe-
Q psy710 110 GTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPT--AIAFDPIQKLLAIGT- 186 (591)
Q Consensus 110 ~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~--~~~~~~~~~~l~~~~- 186 (591)
++.++.|++||+.+++....... +...+. ...++|++++++...
T Consensus 98 ~~~~~~l~~~d~~~g~~~~~~~~---------------------------------~~~~~~~~~~~~~~dg~~l~~~~~ 144 (388)
T 3pe7_A 98 VKDGRNLMRVDLATLEENVVYQV---------------------------------PAEWVGYGTWVANSDCTKLVGIEI 144 (388)
T ss_dssp EETTTEEEEEETTTCCEEEEEEC---------------------------------CTTEEEEEEEEECTTSSEEEEEEE
T ss_pred EeCCCeEEEEECCCCcceeeeec---------------------------------hhhcccccceeECCCCCeeccccc
Confidence 99999999999998765443321 111122 233488888876432
Q ss_pred ---------------------CCCcEEEeCCCCeEEEEeccCCCcEEEEEEEc-CCceEEEEeCC------CcEEEEEcc
Q psy710 187 ---------------------KTGSLRLLGRPGVDAHVRHETDAAVIQMQFLT-NEGALITATAD------DSLHLWNFR 238 (591)
Q Consensus 187 ---------------------~dg~i~i~d~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d------~~i~~wd~~ 238 (591)
.+..|++||+.+++......+...+..+.|+| +|+.|+....+ ..|.++|..
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~ 224 (388)
T 3pe7_A 145 RREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINED 224 (388)
T ss_dssp EGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETT
T ss_pred cCcccccccccchhhhhhccCCcceEEEEECCCCceEEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCC
Confidence 34679999998877666555556789999999 99988877653 368888877
Q ss_pred CCCcceEEeeeecc--ccEEEEEecCCCCEEEEEeC-Cc----cEEEEEccCccccceeeehhhhccccccCCCCC---e
Q psy710 239 QKRPEIVHSLKFQR--ERITYIHLPLQSKWLYVGTE-KG----NIHVVNIESFTLSGYIINWNKAIDVCMKTHPGP---I 308 (591)
Q Consensus 239 ~~~~~~~~~~~~~~--~~v~~~~~sp~~~~l~~~~~-dg----~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~---v 308 (591)
... . ..+..+. ..+..+.|+|||+.|+..+. ++ .|++||+.+++... ......+... .
T Consensus 225 ~~~--~-~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~---------l~~~~~~~~~~~~~ 292 (388)
T 3pe7_A 225 GTN--M-RKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQ---------LTSMPACSHLMSNY 292 (388)
T ss_dssp SCC--C-EESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEE---------EEEECCEEEEEECT
T ss_pred CCc--e-EEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEE---------EEcCCCceeeeecC
Confidence 652 2 3333333 35778899999997765443 22 39999999876521 0011110000 1
Q ss_pred EEEecCCCCCCeEEEE---------EcCCEEEEEecccceEEEEeccCC-----------CeeEEEEeecCCEEEEEe-c
Q psy710 309 IHLSDNPLDPSKLLLA---------YETGLVVHWDLKLKRAEFRWQCSE-----------PIKSVCWHYEGKQFLCSH-T 367 (591)
Q Consensus 309 ~~~~~sp~~~~~l~~~---------~~dg~i~iwd~~~~~~~~~~~~~~-----------~v~~~~~sp~g~~l~s~~-~ 367 (591)
..+.|+| |++.|+.. ..+..|++||+.+++......+.. .+.+++|+|||+.|+.++ .
T Consensus 293 ~~~~~sp-dg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~ 371 (388)
T 3pe7_A 293 DGSLMVG-DGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQHRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDV 371 (388)
T ss_dssp TSSEEEE-EECCC------------CCCCEEEEEETTTTEEEEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECT
T ss_pred CCCeEcc-CCCcceeEeeeccccccCCCCEEEEEeccCCceEEeccccCcccccccccccCCCCccCCCCCCEEEEEecC
Confidence 1136899 99988764 446799999999988876666655 588899999999888665 5
Q ss_pred CCcEEEEecC
Q psy710 368 DGTISTWAVR 377 (591)
Q Consensus 368 dg~i~vwd~~ 377 (591)
+|...||.++
T Consensus 372 ~g~~~l~~~~ 381 (388)
T 3pe7_A 372 HGKPALYLAT 381 (388)
T ss_dssp TSSCEEEEEE
T ss_pred CCceeEEEEE
Confidence 7777777665
No 163
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.87 E-value=6.4e-20 Score=178.38 Aligned_cols=279 Identities=12% Similarity=0.076 Sum_probs=185.2
Q ss_pred EEEEecC--CCeEEEEeecc--cCceeeeEEE-eeccceEEEEeeCCceEEEEEeCCCcEEEEEee-eeeeeceeccccc
Q psy710 62 ALITATA--DDSLHLWNFRQ--KRPEIVHSLK-FQRERITYIHLPLQSKWLYVGTEKGNIHVVNIE-SFTLSGYIINWNK 135 (591)
Q Consensus 62 ~l~s~~~--d~~i~vw~~~~--~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~-~~~~~~~~~~~~~ 135 (591)
+++.|+. ++.|.+|+++. ++...+.... .....+..++|+|++++|++++.+ .|.+|++. +++.......
T Consensus 4 ~~~vg~~~~~~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~--- 79 (365)
T 1jof_A 4 HLMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASH--- 79 (365)
T ss_dssp EEEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEE---
T ss_pred EEEEEEccCCCcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEe---
Confidence 3555554 25688887753 3211222221 122467889999999999998887 99999997 6654322110
Q ss_pred ccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCCCCE--EEEEe-------------CCCcEEEeCCC-Ce
Q psy710 136 AIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKL--LAIGT-------------KTGSLRLLGRP-GV 199 (591)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~--l~~~~-------------~dg~i~i~d~~-~~ 199 (591)
...+.+..++|+|+++. ++++. .+|.+.+|++. .+
T Consensus 80 -----------------------------~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g 130 (365)
T 1jof_A 80 -----------------------------PIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETG 130 (365)
T ss_dssp -----------------------------ECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTC
T ss_pred -----------------------------ecCCCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCC
Confidence 00112456889999984 44542 68999999886 33
Q ss_pred EEE---Ee--ccCCCcEEEEEEEcCCceEEEEeC-CCcEEEEEcc-CCCcceEEeeee--ccccEEEEEecCCCCEEEEE
Q psy710 200 DAH---VR--HETDAAVIQMQFLTNEGALITATA-DDSLHLWNFR-QKRPEIVHSLKF--QRERITYIHLPLQSKWLYVG 270 (591)
Q Consensus 200 ~~~---~~--~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~~wd~~-~~~~~~~~~~~~--~~~~v~~~~~sp~~~~l~~~ 270 (591)
+.. .. +.....+.+++|+|+|++|+++.. ++.|++|++. +++...+..+.. +...+..++|+|||++++++
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~ 210 (365)
T 1jof_A 131 KLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYAL 210 (365)
T ss_dssp CEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEE
T ss_pred cCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEE
Confidence 332 11 123457999999999998887754 6799999998 563333334432 34668999999999999887
Q ss_pred eC-CccEEEEEcc--Cccccc--eeeehhhhccccccCCCC------CeEEEe-cCCCCCCeEEEEEcC-C-----EEEE
Q psy710 271 TE-KGNIHVVNIE--SFTLSG--YIINWNKAIDVCMKTHPG------PIIHLS-DNPLDPSKLLLAYET-G-----LVVH 332 (591)
Q Consensus 271 ~~-dg~i~i~d~~--~~~~~~--~~~~~~~~~~~~~~~~~~------~v~~~~-~sp~~~~~l~~~~~d-g-----~i~i 332 (591)
+. ++.|.+|++. +++... ..+. .+.....+|.. .+..++ |+| |+++|+++..+ . .|.+
T Consensus 211 ~~~~~~v~v~~~~~~~g~~~~~~~~~~---~~~~~~~g~~~~~~~~~~~~~i~~~sp-dG~~l~v~~~~~~~~~~~~i~v 286 (365)
T 1jof_A 211 MEAGNRICEYVIDPATHMPVYTHHSFP---LIPPGIPDRDPETGKGLYRADVCALTF-SGKYMFASSRANKFELQGYIAG 286 (365)
T ss_dssp ETTTTEEEEEEECTTTCCEEEEEEEEE---SSCTTCCCBCTTTSSBSEEEEEEEECT-TSSEEEEEEEESSTTSCCEEEE
T ss_pred ECCCCeEEEEEEeCCCCcEEEccceEE---cCCCCcCCcccccccccccccEEEECC-CCCEEEEECCCCCCCCCCeEEE
Confidence 75 6799999875 343310 0000 00000112232 588999 999 99988876543 2 8999
Q ss_pred Eecc-cceEEEE---ec-cCCCeeEEEEee---cCCEEEEEecC-CcEEEEecC
Q psy710 333 WDLK-LKRAEFR---WQ-CSEPIKSVCWHY---EGKQFLCSHTD-GTISTWAVR 377 (591)
Q Consensus 333 wd~~-~~~~~~~---~~-~~~~v~~~~~sp---~g~~l~s~~~d-g~i~vwd~~ 377 (591)
|++. ++++... .. +...+..++|+| ||++|++++.+ +.|.+|+++
T Consensus 287 ~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~ 340 (365)
T 1jof_A 287 FKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWK 340 (365)
T ss_dssp EEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEE
T ss_pred EEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEc
Confidence 9996 5665542 32 455678899999 89999999865 899999998
No 164
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.87 E-value=4.8e-21 Score=189.05 Aligned_cols=296 Identities=12% Similarity=0.004 Sum_probs=200.5
Q ss_pred CCCcEEEeCCCCcEEEEEeCC---CcEEEEcCCCceeEeeccCCcceE-EEEEeecCCEEEEecCCCeEEEEeecccCce
Q psy710 8 YQPTAIAFDPIQKLLAIGTKT---GSLRLLGRPGVDAHVRHETDAAVI-QMQFLTNEGALITATADDSLHLWNFRQKRPE 83 (591)
Q Consensus 8 ~~v~~~~~spdg~~la~g~~d---g~i~lw~~~~~~~~~~~~h~~~v~-~l~~sp~~~~l~s~~~d~~i~vw~~~~~~~~ 83 (591)
..+..++|||||++||..... ..|.+|++.+.+...+..+...+. .+.|+|||++|+.++.++.|.+|++.+++.
T Consensus 36 ~~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~- 114 (396)
T 3c5m_A 36 NYFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLEE- 114 (396)
T ss_dssp CCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCCE-
T ss_pred eeeecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCCc-
Confidence 347889999999998877543 368888988666666655544433 378999999999999989999999988752
Q ss_pred eeeEEEeeccceEEEEeeCCceEEEEEeCCCcEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCcceeee
Q psy710 84 IVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFR 163 (591)
Q Consensus 84 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (591)
......+.. |+++++.|+....+....+|..
T Consensus 115 -~~~~~~~~~------~~~~g~~l~~~~~~~~~~~~~~------------------------------------------ 145 (396)
T 3c5m_A 115 -QVIYTVDEE------WKGYGTWVANSDCTKLVGIEIL------------------------------------------ 145 (396)
T ss_dssp -EEEEECCTT------EEEEEEEEECTTSSEEEEEEEE------------------------------------------
T ss_pred -EEEEecccc------cCCCCCEEEeccCCcccccccc------------------------------------------
Confidence 222222322 6778888887766655444421
Q ss_pred ccCCCCceEEEECCCCCEEEEE-----eCCCcEEEeCCCCeEEEEeccCCCcEEEEEEEc-CCceEEEEeCC------Cc
Q psy710 164 HGFPYQPTAIAFDPIQKLLAIG-----TKTGSLRLLGRPGVDAHVRHETDAAVIQMQFLT-NEGALITATAD------DS 231 (591)
Q Consensus 164 ~~~~~~v~~~~~~~~~~~l~~~-----~~dg~i~i~d~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d------~~ 231 (591)
...++|+++.++.. ..+..|++||+.+++......+...+..+.|+| +++.|+..+.+ ..
T Consensus 146 --------~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~ 217 (396)
T 3c5m_A 146 --------KRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDAR 217 (396)
T ss_dssp --------GGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCC
T ss_pred --------ccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeeccCCcccccceECCCCCCEEEEEecCCCCCCCce
Confidence 12345677665543 346678999988776655444556889999999 78877766543 35
Q ss_pred EEEEEccCCCcceEEeeeec-cccEEEEEecCCCCEEEEEeCC-----ccEEEEEccCccccceeeehhhhccccccCCC
Q psy710 232 LHLWNFRQKRPEIVHSLKFQ-RERITYIHLPLQSKWLYVGTEK-----GNIHVVNIESFTLSGYIINWNKAIDVCMKTHP 305 (591)
Q Consensus 232 i~~wd~~~~~~~~~~~~~~~-~~~v~~~~~sp~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (591)
|.+||+..+. ........ ...+..++|+|||++|+.++.+ +.|++||+.+++... .....
T Consensus 218 l~~~d~~~~~--~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~---------l~~~~--- 283 (396)
T 3c5m_A 218 MWLVNEDGSN--VRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEE---------VMVMP--- 283 (396)
T ss_dssp CEEEETTSCC--CEESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEE---------EEECC---
T ss_pred EEEEECCCCc--eeEeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEE---------eeeCC---
Confidence 8888887652 22222211 2358889999999988776544 449999998775421 00111
Q ss_pred CCeEEEecCCCCCCeEEEEE----------------cCCEEEEEecccceEEEEeccCC-----------CeeEEEEeec
Q psy710 306 GPIIHLSDNPLDPSKLLLAY----------------ETGLVVHWDLKLKRAEFRWQCSE-----------PIKSVCWHYE 358 (591)
Q Consensus 306 ~~v~~~~~sp~~~~~l~~~~----------------~dg~i~iwd~~~~~~~~~~~~~~-----------~v~~~~~sp~ 358 (591)
. .. +.|+|.+++++++++ .+..|++||+.+++......+.. .+..++|+||
T Consensus 284 ~-~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~d 361 (396)
T 3c5m_A 284 P-CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQKLCKHSTSWDVLDGDRQITHPHPSFTPN 361 (396)
T ss_dssp S-EE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCCEEEECCCCCCCBTTBSSTTCCCCEECTT
T ss_pred C-CC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceEEccCCCCccccccccccCCCCCceEccC
Confidence 1 22 788875677777754 34789999999887655555444 2667899999
Q ss_pred CCEEEEEec-CCcEEEEecC
Q psy710 359 GKQFLCSHT-DGTISTWAVR 377 (591)
Q Consensus 359 g~~l~s~~~-dg~i~vwd~~ 377 (591)
|+.|+.++. ++...+|.+.
T Consensus 362 g~~l~~~s~~~~~~~l~~~~ 381 (396)
T 3c5m_A 362 DDGVLFTSDFEGVPAIYIAD 381 (396)
T ss_dssp SSEEEEEECTTSSCEEEEEE
T ss_pred CCeEEEEecCCCCceEEEEE
Confidence 998887764 5555555554
No 165
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.86 E-value=9.1e-20 Score=176.26 Aligned_cols=290 Identities=10% Similarity=0.074 Sum_probs=203.1
Q ss_pred CCCcEEEEEe------CCCcEEEEcCC-CceeEeeccCCcceEEEEEeecCCEEEEec----------CCCeEEEEeecc
Q psy710 17 PIQKLLAIGT------KTGSLRLLGRP-GVDAHVRHETDAAVIQMQFLTNEGALITAT----------ADDSLHLWNFRQ 79 (591)
Q Consensus 17 pdg~~la~g~------~dg~i~lw~~~-~~~~~~~~~h~~~v~~l~~sp~~~~l~s~~----------~d~~i~vw~~~~ 79 (591)
++++++.+.. .|+.|.+||.. ++....+..+..+ .++|+||+++|+++. .+++|.+||..+
T Consensus 13 ~~~~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t 90 (361)
T 2oiz_A 13 PQENRIYVMDSVFMHLTESRVHVYDYTNGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADK 90 (361)
T ss_dssp CGGGEEEEEECCGGGGGGCEEEEEETTTCCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTT
T ss_pred CCCCEEEEECCCCCccccCeEEEEECCCCeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcC
Confidence 4677777654 36799999976 5556666666665 899999999999876 367899999987
Q ss_pred cCceeeeEEEee------ccceEEEEeeCCceEEEEEeC--CCcEEEEEeeeeeeece-ecccccccccCCCCCCCceec
Q psy710 80 KRPEIVHSLKFQ------RERITYIHLPLQSKWLYVGTE--KGNIHVVNIESFTLSGY-IINWNKAIDVCMKTHPGPIIH 150 (591)
Q Consensus 80 ~~~~~~~~~~~~------~~~v~~~~~~~~~~~l~~~~~--d~~i~vwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 150 (591)
.+ .+..+... ......++|+||+++|+++.. ++.|.+||+.+++.+.. +..
T Consensus 91 ~~--~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~------------------ 150 (361)
T 2oiz_A 91 LT--FEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAA------------------ 150 (361)
T ss_dssp CC--EEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGG------------------
T ss_pred Cc--EEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecC------------------
Confidence 74 55665543 234567999999999999874 58999999998876554 331
Q ss_pred cCCCCcCcceeeeccCCCCceEEEECCCC-CEEEEEeCCCcEEEeCCCC-eEEE-Eec-----cCCCcEEEEEEEcCCce
Q psy710 151 LSDNPLDPSKTFRHGFPYQPTAIAFDPIQ-KLLAIGTKTGSLRLLGRPG-VDAH-VRH-----ETDAAVIQMQFLTNEGA 222 (591)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~i~d~~~-~~~~-~~~-----~~~~~v~~~~~~~~~~~ 222 (591)
.. ...+.+.|++ ..+++.+.||.+.+|+... ++.. ... ........+.+++++..
T Consensus 151 ----------------~~-~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 213 (361)
T 2oiz_A 151 ----------------AG-CWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPIFIAPALDKDK 213 (361)
T ss_dssp ----------------TT-EEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCBCSCCEECSSE
T ss_pred ----------------CC-cceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCceEEEecccCCE
Confidence 00 1224556654 5666777788877776543 2222 111 11111123344677877
Q ss_pred EEEEeCCCcEEEEEccCCCcceEEeeeecc----------ccEEEEEecCCCCEEEEEeC-----------CccEEEEEc
Q psy710 223 LITATADDSLHLWNFRQKRPEIVHSLKFQR----------ERITYIHLPLQSKWLYVGTE-----------KGNIHVVNI 281 (591)
Q Consensus 223 l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~----------~~v~~~~~sp~~~~l~~~~~-----------dg~i~i~d~ 281 (591)
++..+.++.+.++|+..........+.... .....++++|+++.++++.. .+.|.+||+
T Consensus 214 ~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~ 293 (361)
T 2oiz_A 214 AHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDT 293 (361)
T ss_dssp EEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEET
T ss_pred EEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEEC
Confidence 887888899999999765433333322110 11112689999988887653 347999999
Q ss_pred cCccccceeeehhhhccccccCCCCCeEEEecCCCCCCeEEEEEcCCEEEEEecccc--eEEEEe-ccCCCeeEEEEeec
Q psy710 282 ESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKLLLAYETGLVVHWDLKLK--RAEFRW-QCSEPIKSVCWHYE 358 (591)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~iwd~~~~--~~~~~~-~~~~~v~~~~~sp~ 358 (591)
.+.+.. ..+..+. +.+++|+| |+++|++++. +.|.+||..++ +++..+ ........++++|+
T Consensus 294 ~t~~~v-----------~~i~~~~--p~~ia~sp-dg~~l~v~n~-~~v~v~D~~t~~l~~~~~i~~~G~~P~~~~~~p~ 358 (361)
T 2oiz_A 294 KTKQRV-----------ARIPGRD--ALSMTIDQ-QRNLMLTLDG-GNVNVYDISQPEPKLLRTIEGAAEASLQVQFHPV 358 (361)
T ss_dssp TTTEEE-----------EEEECTT--CCEEEEET-TTTEEEEECS-SCEEEEECSSSSCEEEEEETTSCSSEEEEEECCC
T ss_pred CCCcEE-----------EEEecCC--eeEEEECC-CCCEEEEeCC-CeEEEEECCCCcceeeEEeccCCCCcEEEEecCC
Confidence 998763 2444444 89999999 9999998887 99999999999 988886 57788899999999
Q ss_pred CC
Q psy710 359 GK 360 (591)
Q Consensus 359 g~ 360 (591)
|+
T Consensus 359 G~ 360 (361)
T 2oiz_A 359 GG 360 (361)
T ss_dssp SC
T ss_pred CC
Confidence 86
No 166
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.86 E-value=5.1e-20 Score=196.32 Aligned_cols=319 Identities=8% Similarity=0.069 Sum_probs=208.2
Q ss_pred cceEEEEEeecCCEEEEecCCCeEEEEeecccCceeeeEEEeeccc-----eEEEEeeCCceEEEEEeCC---------C
Q psy710 49 AAVIQMQFLTNEGALITATADDSLHLWNFRQKRPEIVHSLKFQRER-----ITYIHLPLQSKWLYVGTEK---------G 114 (591)
Q Consensus 49 ~~v~~l~~sp~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~-----v~~~~~~~~~~~l~~~~~d---------~ 114 (591)
....+++|+||+++++++ |++|++||+.+++ ....+..|... ...++|||||+.|+.++.+ +
T Consensus 17 ~~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~ 92 (740)
T 4a5s_A 17 LKLYSLRWISDHEYLYKQ--ENNILVFNAEYGN--SSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTA 92 (740)
T ss_dssp CCCCCEEECSSSEEEEEE--TTEEEEEETTTCC--EEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEE
T ss_pred ccccccEECCCCcEEEEc--CCcEEEEECCCCc--eEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccce
Confidence 346688999999988886 8999999999885 34445555432 2347889999999998876 5
Q ss_pred cEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCCCCEEEEEeCCCcEEEe
Q psy710 115 NIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLL 194 (591)
Q Consensus 115 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~ 194 (591)
.+.+||+.+++.... ..+...+...+|||||+.||.+. ++.|++|
T Consensus 93 ~~~~~d~~~~~~~~l----------------------------------~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~ 137 (740)
T 4a5s_A 93 SYDIYDLNKRQLITE----------------------------------ERIPNNTQWVTWSPVGHKLAYVW-NNDIYVK 137 (740)
T ss_dssp EEEEEETTTTEECCS----------------------------------SCCCTTEEEEEECSSTTCEEEEE-TTEEEEE
T ss_pred EEEEEECCCCcEEEc----------------------------------ccCCCcceeeEECCCCCEEEEEE-CCeEEEE
Confidence 667999998775432 12445678999999999999885 6899999
Q ss_pred CCCCeEEEEeccC--CCcE-----------------EEEEEEcCCceEEEEeCCC-------------------------
Q psy710 195 GRPGVDAHVRHET--DAAV-----------------IQMQFLTNEGALITATADD------------------------- 230 (591)
Q Consensus 195 d~~~~~~~~~~~~--~~~v-----------------~~~~~~~~~~~l~~~~~d~------------------------- 230 (591)
+..+++....... ...+ ..+.|+|||++|+.++.|.
T Consensus 138 ~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~ 217 (740)
T 4a5s_A 138 IEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVP 217 (740)
T ss_dssp SSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEE
T ss_pred ECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeec
Confidence 9987765543221 1112 3589999999998875322
Q ss_pred -----------cEEEEEccC---CCcceEEeee------eccccEEEEEecCCCCEEEEEeC----CccEEEEEccCcc-
Q psy710 231 -----------SLHLWNFRQ---KRPEIVHSLK------FQRERITYIHLPLQSKWLYVGTE----KGNIHVVNIESFT- 285 (591)
Q Consensus 231 -----------~i~~wd~~~---~~~~~~~~~~------~~~~~v~~~~~sp~~~~l~~~~~----dg~i~i~d~~~~~- 285 (591)
.|++||+.+ ++......+. ++...+..++|+|||+.++.... +..|++||+.+++
T Consensus 218 yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~ 297 (740)
T 4a5s_A 218 YPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSG 297 (740)
T ss_dssp CCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTT
T ss_pred CCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCcc
Confidence 477888887 5211223333 26677999999999997665432 3379999999876
Q ss_pred ---ccceeeehhhhccccccCCCCCeE-----EEecCCCCCCeEE-EEEc-C--CEEEEEecccceEEEEeccCCCeeEE
Q psy710 286 ---LSGYIINWNKAIDVCMKTHPGPII-----HLSDNPLDPSKLL-LAYE-T--GLVVHWDLKLKRAEFRWQCSEPIKSV 353 (591)
Q Consensus 286 ---~~~~~~~~~~~~~~~~~~~~~~v~-----~~~~sp~~~~~l~-~~~~-d--g~i~iwd~~~~~~~~~~~~~~~v~~~ 353 (591)
+.. ........|...+. .++|+| |++.|+ ..+. + ..|++||+.+++..........+..+
T Consensus 298 ~~~~~~-------~~~l~~~~~~~~v~~~~~~~p~fsp-DG~~l~~~~s~~~G~~~l~~~~~~~~~~~~lT~g~~~v~~~ 369 (740)
T 4a5s_A 298 RWNCLV-------ARQHIEMSTTGWVGRFRPSEPHFTL-DGNSFYKIISNEEGYRHICYFQIDKKDCTFITKGTWEVIGI 369 (740)
T ss_dssp EEEECG-------GGCEEEECSSSCSSSSSCCCCEECT-TSSEEEEEEECTTSCEEEEEEETTCSSCEESCCSSSCEEEE
T ss_pred ccceeE-------EEEeeeccCCceEccCcCCCceEcC-CCCEEEEEEEcCCCceEEEEEECCCCceEecccCCEEEEEE
Confidence 210 00001133444443 688999 999887 6654 3 47888999988877666666666665
Q ss_pred EEeecCCEEEEEecC-----CcEEEEecCCCCCce-eeecccccccCCCCCCCCCcceEEEEeecCCCCcEEEEECC
Q psy710 354 CWHYEGKQFLCSHTD-----GTISTWAVRPLAKPV-SVNQPHIKTNKDGKLEQCKPIQKVEWKHSRSGEGFVIFSGG 424 (591)
Q Consensus 354 ~~sp~g~~l~s~~~d-----g~i~vwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~g~ 424 (591)
.+ +|++.|+..+.. +...||.++..+... ..+.... ......+....|+| ++..+++.+.+
T Consensus 370 ~~-~d~~~i~f~~~~~~~~~~~~~ly~v~~~g~~~~~~lt~~~-------~~~~~~~~~~~~S~--dg~~~~~~~s~ 436 (740)
T 4a5s_A 370 EA-LTSDYLYYISNEYKGMPGGRNLYKIQLIDYTKVTCLSCEL-------NPERCQYYSVSFSK--EAKYYQLRCSG 436 (740)
T ss_dssp EE-ECSSEEEEEESCGGGCTTCBEEEEEETTEEEEEEESSTTT-------STTTBCBEEEEECT--TSSEEEEEECS
T ss_pred EE-EeCCEEEEEEecCCCCCceeEEEEEECCCCCcceeecccc-------CCCCCceEEEEECC--CCCEEEEEeCC
Confidence 43 557666554433 345555554223222 1232110 00135678889986 44444444444
No 167
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.86 E-value=1.9e-19 Score=175.12 Aligned_cols=280 Identities=12% Similarity=0.094 Sum_probs=184.1
Q ss_pred EEEEEeCC--CcEEEEcCC--CceeEeec----cCCcceEEEEEeecCCEEEEecCCCeEEEEeec-ccCceeeeEEEee
Q psy710 21 LLAIGTKT--GSLRLLGRP--GVDAHVRH----ETDAAVIQMQFLTNEGALITATADDSLHLWNFR-QKRPEIVHSLKFQ 91 (591)
Q Consensus 21 ~la~g~~d--g~i~lw~~~--~~~~~~~~----~h~~~v~~l~~sp~~~~l~s~~~d~~i~vw~~~-~~~~~~~~~~~~~ 91 (591)
+|++|+.. +.|.+|+++ ...+..+. .+...+..++|+|++++|++++.+ .|.+|++. +++ ........
T Consensus 4 ~~~vg~~~~~~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~--~~~~~~~~ 80 (365)
T 1jof_A 4 HLMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTE--IVHEASHP 80 (365)
T ss_dssp EEEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTE--EEEEEEEE
T ss_pred EEEEEEccCCCcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCC--EEEeeEee
Confidence 46667653 568887653 33333322 233468889999999999998887 99999997 553 32222211
Q ss_pred -ccceEEEEeeCCceE--EEEEe-------------CCCcEEEEEee-eeeeeceecccccccccCCCCCCCceeccCCC
Q psy710 92 -RERITYIHLPLQSKW--LYVGT-------------EKGNIHVVNIE-SFTLSGYIINWNKAIDVCMKTHPGPIIHLSDN 154 (591)
Q Consensus 92 -~~~v~~~~~~~~~~~--l~~~~-------------~d~~i~vwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (591)
.+.+.+++|+|+++. ++++. .++.+.+|++. +++....+..
T Consensus 81 ~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~---------------------- 138 (365)
T 1jof_A 81 IGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQN---------------------- 138 (365)
T ss_dssp CCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEE----------------------
T ss_pred cCCCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEee----------------------
Confidence 123556899999995 44553 68899999997 3443322210
Q ss_pred CcCcceeeeccCCCCceEEEECCCCCEEEEEeC-CCcEEEeCCC-CeEEEE--ec---cCCCcEEEEEEEcCCceEEEEe
Q psy710 155 PLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTK-TGSLRLLGRP-GVDAHV--RH---ETDAAVIQMQFLTNEGALITAT 227 (591)
Q Consensus 155 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~i~d~~-~~~~~~--~~---~~~~~v~~~~~~~~~~~l~~~~ 227 (591)
+...+...+.+++|+|+|++++++.. ++.|++|++. +++... .. .+...+..++|+|+|+++++++
T Consensus 139 -------~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~ 211 (365)
T 1jof_A 139 -------YEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALM 211 (365)
T ss_dssp -------EECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEE
T ss_pred -------EEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEE
Confidence 00123455789999999998887764 6799999987 554321 11 1245789999999999988876
Q ss_pred C-CCcEEEEEccCCCcceE---Eeee-------eccc------cEEEEE-ecCCCCEEEEEeCCc------cEEEEEcc-
Q psy710 228 A-DDSLHLWNFRQKRPEIV---HSLK-------FQRE------RITYIH-LPLQSKWLYVGTEKG------NIHVVNIE- 282 (591)
Q Consensus 228 ~-d~~i~~wd~~~~~~~~~---~~~~-------~~~~------~v~~~~-~sp~~~~l~~~~~dg------~i~i~d~~- 282 (591)
. ++.|.+|++.....+.. ..+. ++.. .+..++ |+|||++|+++..+. .|.+|++.
T Consensus 212 ~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~ 291 (365)
T 1jof_A 212 EAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRD 291 (365)
T ss_dssp TTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECT
T ss_pred CCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECC
Confidence 5 68999998764221321 1221 1121 588999 999999988776433 79999996
Q ss_pred CccccceeeehhhhccccccCCCCCeEEEecCCC--CCCeEEEEEc-CCEEEEEecccceE
Q psy710 283 SFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPL--DPSKLLLAYE-TGLVVHWDLKLKRA 340 (591)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~--~~~~l~~~~~-dg~i~iwd~~~~~~ 340 (591)
++++.. . ......+...+..++|+|. |+++|++++. ++.|++|++....+
T Consensus 292 ~g~~~~-~-------~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~~l 344 (365)
T 1jof_A 292 CGSIEK-Q-------LFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDEFL 344 (365)
T ss_dssp TSCEEE-E-------EEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETTEE
T ss_pred CCCEEE-e-------eeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchhhC
Confidence 444321 0 0011223344567889994 5889999876 48999999987643
No 168
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.84 E-value=1.2e-19 Score=191.66 Aligned_cols=321 Identities=11% Similarity=0.006 Sum_probs=208.0
Q ss_pred cCCCCCCcEEEeCCCCcEEEEE--eCCCcEEEEcC-CCceeEeeccCCcceE---------EEEEe--ecCCE-EEEecC
Q psy710 4 HGFPYQPTAIAFDPIQKLLAIG--TKTGSLRLLGR-PGVDAHVRHETDAAVI---------QMQFL--TNEGA-LITATA 68 (591)
Q Consensus 4 ~gh~~~v~~~~~spdg~~la~g--~~dg~i~lw~~-~~~~~~~~~~h~~~v~---------~l~~s--p~~~~-l~s~~~ 68 (591)
.+|...+..++|++++-+++.. +.++...||.. .+.....+..|...+. ...|+ |||+. |+.++.
T Consensus 20 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~ 99 (662)
T 3azo_A 20 ASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHF 99 (662)
T ss_dssp HHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBT
T ss_pred hhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeecCCCeEEEEEEC
Confidence 3588899999999987777777 55888999984 4666777777776666 66676 99998 776654
Q ss_pred -CCeEEEEeec--c-cCceeeeEEEe-----eccceEEEEeeCCceEEEEEeCC----------CcEEEEEeee------
Q psy710 69 -DDSLHLWNFR--Q-KRPEIVHSLKF-----QRERITYIHLPLQSKWLYVGTEK----------GNIHVVNIES------ 123 (591)
Q Consensus 69 -d~~i~vw~~~--~-~~~~~~~~~~~-----~~~~v~~~~~~~~~~~l~~~~~d----------~~i~vwd~~~------ 123 (591)
+..|.++++. + ++ ...+.. |...+..++|+|||+.|++++.+ ..|++||+.+
T Consensus 100 ~~~~l~~~~~~~~g~~~---~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 176 (662)
T 3azo_A 100 GDQRLYAFEPDAPGGAV---PRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADR 176 (662)
T ss_dssp TTCCEEEECTTSTTCCC---CEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCG
T ss_pred CCCeEEEEcCCCCCCCC---CEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccC
Confidence 4566666655 2 43 334444 56678899999999999998876 5789999876
Q ss_pred eeeeceecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCCCCEEEEEeCC--------CcEEEeC
Q psy710 124 FTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTKT--------GSLRLLG 195 (591)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--------g~i~i~d 195 (591)
++...... .+...+..++|+|||+.|+.++.+ ..|++||
T Consensus 177 ~~~~~l~~---------------------------------~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d 223 (662)
T 3azo_A 177 SAVRELSD---------------------------------DAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTAR 223 (662)
T ss_dssp GGSEESSC---------------------------------SCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEE
T ss_pred CceeEEEe---------------------------------cCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEE
Confidence 43221110 122345678999999999887754 3799999
Q ss_pred CC-Ce---EEEEecc-CCCcEEEEEEEcCCceEEEEeCCC--cEEEEEccCCCcceEEeeeecccc--------EEEEEe
Q psy710 196 RP-GV---DAHVRHE-TDAAVIQMQFLTNEGALITATADD--SLHLWNFRQKRPEIVHSLKFQRER--------ITYIHL 260 (591)
Q Consensus 196 ~~-~~---~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~--~i~~wd~~~~~~~~~~~~~~~~~~--------v~~~~~ 260 (591)
+. ++ +...... +...+..+.|+|||++++++..++ .|.+||..++ +.......+... +..++|
T Consensus 224 ~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~--~~~~l~~~~~~~~~p~w~~~~~~~~~ 301 (662)
T 3azo_A 224 VTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATG--AATQLCRREEEFAGPLWTPGMRWFAP 301 (662)
T ss_dssp ECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTC--CEEESSCCSSBSSCCCCSTTCCSEEE
T ss_pred ECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCC--ceeecccccccccCccccccCceEeE
Confidence 88 44 3333322 246899999999999778888888 4555555455 333333333222 457889
Q ss_pred cCCCCEEEEEeCCccEEEE--EccCccccceeeehhhhccccccCCCCCeEEEecCCCCCCeE--EEEEcCC--EEEEEe
Q psy710 261 PLQSKWLYVGTEKGNIHVV--NIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKL--LLAYETG--LVVHWD 334 (591)
Q Consensus 261 sp~~~~l~~~~~dg~i~i~--d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l--~~~~~dg--~i~iwd 334 (591)
+|+++++++++. +.+++| |+.+++.. .+..|...+..+. ++ +++.+ ++++.+. .|+++|
T Consensus 302 ~~~~~~~~~~~~-~~~~l~~~d~~~~~~~------------~l~~~~~~~~~~~-s~-~~~~~~~~~~~~~~~~~i~~~d 366 (662)
T 3azo_A 302 LANGLIAVVHGK-GAAVLGILDPESGELV------------DAAGPWTEWAATL-TV-SGTRAVGVAASPRTAYEVVELD 366 (662)
T ss_dssp CTTSCEEEEEBS-SSCEEEEEETTTTEEE------------ECCSSCCEEEEEE-EE-ETTEEEEEEEETTEEEEEEEEE
T ss_pred eCCCEEEEEEEc-CccEEEEEECCCCcEE------------EecCCCCeEEEEE-ec-CCCEEEEEEcCCCCCCEEEEEE
Confidence 999999999998 999999 44444431 4455666677661 34 44433 3344444 566667
Q ss_pred cccceEEEEec-cCCCeeEEEEeecCCEEEEEecCCcEEEEecC
Q psy710 335 LKLKRAEFRWQ-CSEPIKSVCWHYEGKQFLCSHTDGTISTWAVR 377 (591)
Q Consensus 335 ~~~~~~~~~~~-~~~~v~~~~~sp~g~~l~s~~~dg~i~vwd~~ 377 (591)
+.+++...... +...+....+.+.....+.+..+..|..|-..
T Consensus 367 ~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~dg~~i~~~~~~ 410 (662)
T 3azo_A 367 TVTGRARTIGARHTDPVDPAYYPEPQIRTFTAPDGREIHAHIYP 410 (662)
T ss_dssp TTTCCEEEEESCCCCSSCGGGSCCCEEEEEECTTSCEEEEEEEC
T ss_pred CCCCceEEeecCCcccCCccccCcceEEEEEcCCCCEEEEEEEC
Confidence 77887766544 32333333333333333333233356666554
No 169
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.84 E-value=6.7e-20 Score=181.57 Aligned_cols=197 Identities=12% Similarity=0.108 Sum_probs=152.8
Q ss_pred CCceEEEECCCCCEEEEEeCCCcEEEeCCCCe-----------EEE-----EeccCCCcEEEEEEEcCCceEE----EEe
Q psy710 168 YQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGV-----------DAH-----VRHETDAAVIQMQFLTNEGALI----TAT 227 (591)
Q Consensus 168 ~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~-----------~~~-----~~~~~~~~v~~~~~~~~~~~l~----~~~ 227 (591)
..++.+++++++.++++++.++ +++|+.... ... ....+...|.+++|+|++++|+ +++
T Consensus 37 ~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~sgs 115 (434)
T 2oit_A 37 ERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSSE 115 (434)
T ss_dssp SCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEETT
T ss_pred CCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEeccC
Confidence 3468999999999999999888 888653210 111 1122345799999999999999 778
Q ss_pred CCCcEEEEEccCC-----Cc----ceEEeeeeccccEEEEEecCC-CCEEEEEeCCccEEEEEccCccccceeeehhhhc
Q psy710 228 ADDSLHLWNFRQK-----RP----EIVHSLKFQRERITYIHLPLQ-SKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAI 297 (591)
Q Consensus 228 ~d~~i~~wd~~~~-----~~----~~~~~~~~~~~~v~~~~~sp~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~ 297 (591)
.|+.|++||+++. +. ..+..+.+|...|.+++|+|+ +++|++++.||+|++||++++...
T Consensus 116 ~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~---------- 185 (434)
T 2oit_A 116 YGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKV---------- 185 (434)
T ss_dssp TEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEE----------
T ss_pred CCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcce----------
Confidence 8999999998653 11 135667778999999999998 889999999999999999987441
Q ss_pred cccccCCCCCeEEEecCCCCCCeEEEEEcCCEEEEEecccceEEEEec-c-------CCCeeEEEEeecCCEEEEEe-cC
Q psy710 298 DVCMKTHPGPIIHLSDNPLDPSKLLLAYETGLVVHWDLKLKRAEFRWQ-C-------SEPIKSVCWHYEGKQFLCSH-TD 368 (591)
Q Consensus 298 ~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~-------~~~v~~~~~sp~g~~l~s~~-~d 368 (591)
....+|...|.+++|+| ++++|++|+.||.|++||++ ++....+. + ...|.+++|++++.++++.+ .|
T Consensus 186 -~~~~~~~~~v~~v~wsp-dg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~d 262 (434)
T 2oit_A 186 -CATLPSTVAVTSVCWSP-KGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAAD 262 (434)
T ss_dssp -EEEECGGGCEEEEEECT-TSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETT
T ss_pred -eeccCCCCceeEEEEcC-CCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCC
Confidence 23445788999999999 99999999999999999998 44444432 2 23789999999988876543 44
Q ss_pred Cc------EEEEecCC
Q psy710 369 GT------ISTWAVRP 378 (591)
Q Consensus 369 g~------i~vwd~~~ 378 (591)
|. +++|++..
T Consensus 263 g~~~~~~~v~i~~l~~ 278 (434)
T 2oit_A 263 GTLETSPDVVMALLPK 278 (434)
T ss_dssp CCSSSCCEEEEEECCC
T ss_pred CccCCCCceEEEEecc
Confidence 33 89999983
No 170
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.84 E-value=1.8e-18 Score=167.09 Aligned_cols=302 Identities=11% Similarity=0.091 Sum_probs=205.3
Q ss_pred cCCEEEEec------CCCeEEEEeecccCceeeeEEEeeccceEEEEeeCCceEEEEEeC----------CCcEEEEEee
Q psy710 59 NEGALITAT------ADDSLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGTE----------KGNIHVVNIE 122 (591)
Q Consensus 59 ~~~~l~s~~------~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----------d~~i~vwd~~ 122 (591)
++++++... .|+.|.+||..+++ .+..+..+..+ .++|+||+++++++.. ++.|.+||..
T Consensus 14 ~~~~~yv~~~~~~~~~d~~v~v~D~~t~~--~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~ 89 (361)
T 2oiz_A 14 QENRIYVMDSVFMHLTESRVHVYDYTNGK--FLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDAD 89 (361)
T ss_dssp GGGEEEEEECCGGGGGGCEEEEEETTTCC--EEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETT
T ss_pred CCCEEEEECCCCCccccCeEEEEECCCCe--EEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECc
Confidence 455555442 47899999998875 56666665554 8999999999999863 6789999998
Q ss_pred eeeeeceecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCCCCEEEEEeC--CCcEEEeCCCCeE
Q psy710 123 SFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTK--TGSLRLLGRPGVD 200 (591)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~i~d~~~~~ 200 (591)
+++....+...... ..+...+..++++|+|++|+++.. ++.|.+||..+.+
T Consensus 90 t~~~~~~i~~~~~~---------------------------~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~ 142 (361)
T 2oiz_A 90 KLTFEKEISLPPKR---------------------------VQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGD 142 (361)
T ss_dssp TCCEEEEEEECTTB---------------------------CCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTE
T ss_pred CCcEEEEEEcCccc---------------------------cccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCc
Confidence 87766655421100 001234678999999999998874 5889999999887
Q ss_pred EEEe-ccCCCcEEEEEEEcCC-ceEEEEeCCCcEEEEEccCCCcceEEe------eeeccccEEEEEecCCCCEEEEEeC
Q psy710 201 AHVR-HETDAAVIQMQFLTNE-GALITATADDSLHLWNFRQKRPEIVHS------LKFQRERITYIHLPLQSKWLYVGTE 272 (591)
Q Consensus 201 ~~~~-~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~~wd~~~~~~~~~~~------~~~~~~~v~~~~~sp~~~~l~~~~~ 272 (591)
.... .... ....+.+.|++ ..+++.+.||.+.+|+..... +.... +.....+ ..+.+++++..++..+.
T Consensus 143 ~~~~~i~~~-~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g-~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~ 219 (361)
T 2oiz_A 143 YVEDVTAAA-GCWSVIPQPNRPRSFMTICGDGGLLTINLGEDG-KVASQSRSKQMFSVKDDP-IFIAPALDKDKAHFVSY 219 (361)
T ss_dssp EEEEEGGGT-TEEEEEECTTSSSEEEEEETTSSEEEEEECTTS-SEEEEEECCCCSCTTTSC-BCSCCEECSSEEEEEBT
T ss_pred EEEEEecCC-CcceeEEcCCCCeeEEEECCCCcEEEEEECCCC-cEeeeccccceEcCCCCc-eEEEecccCCEEEEEeC
Confidence 7655 4432 22335667766 567888899999999986521 33211 1111122 12334567777777888
Q ss_pred CccEEEEEccCcccccee-eehhh--hccccccCCCCCeEEEecCCCCCCeEEEEEc-----------CCEEEEEecccc
Q psy710 273 KGNIHVVNIESFTLSGYI-INWNK--AIDVCMKTHPGPIIHLSDNPLDPSKLLLAYE-----------TGLVVHWDLKLK 338 (591)
Q Consensus 273 dg~i~i~d~~~~~~~~~~-~~~~~--~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~-----------dg~i~iwd~~~~ 338 (591)
++.+.++|+......... +.... ....... ......++|+| +++.++++.. .+.|.+||+.++
T Consensus 220 ~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~--p~g~~~~a~~~-dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~ 296 (361)
T 2oiz_A 220 YGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWV--PGGYNLVGLHR-ASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTK 296 (361)
T ss_dssp TSEEEEEECSSSSCEEEEEEESCCHHHHHTTCE--ECCSSCEEEET-TTTEEEEEEESSCCTTCTTCCCSEEEEEETTTT
T ss_pred CCeEEEEEecCCCceecccccccCccccccccc--cCCeeEEEEec-CCCeEEEEEccCCCcccccCCCceEEEEECCCC
Confidence 899999998755431100 00000 0000000 01112368899 8888877653 358999999999
Q ss_pred eEEEEeccCCCeeEEEEeecCCEEEEEecCCcEEEEecCCCC--CceeeecccccccCCCCCCCCCcceEEEEee
Q psy710 339 RAEFRWQCSEPIKSVCWHYEGKQFLCSHTDGTISTWAVRPLA--KPVSVNQPHIKTNKDGKLEQCKPIQKVEWKH 411 (591)
Q Consensus 339 ~~~~~~~~~~~v~~~~~sp~g~~l~s~~~dg~i~vwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 411 (591)
+.+..+.... +.+++|+|||++|++++. +.|.+||.. ++ +.++.+... ...-..++++|
T Consensus 297 ~~v~~i~~~~-p~~ia~spdg~~l~v~n~-~~v~v~D~~-t~~l~~~~~i~~~-----------G~~P~~~~~~p 357 (361)
T 2oiz_A 297 QRVARIPGRD-ALSMTIDQQRNLMLTLDG-GNVNVYDIS-QPEPKLLRTIEGA-----------AEASLQVQFHP 357 (361)
T ss_dssp EEEEEEECTT-CCEEEEETTTTEEEEECS-SCEEEEECS-SSSCEEEEEETTS-----------CSSEEEEEECC
T ss_pred cEEEEEecCC-eeEEEECCCCCEEEEeCC-CeEEEEECC-CCcceeeEEeccC-----------CCCcEEEEecC
Confidence 9998888555 999999999999998887 999999999 77 777777665 45567788876
No 171
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.82 E-value=9.4e-18 Score=177.18 Aligned_cols=295 Identities=8% Similarity=-0.064 Sum_probs=194.1
Q ss_pred EeeccCCcceEEEEEeecCCEEEEe--cCCCeEEEEeecccCceeeeEEEeeccceE---------EEEee--CCceE-E
Q psy710 42 HVRHETDAAVIQMQFLTNEGALITA--TADDSLHLWNFRQKRPEIVHSLKFQRERIT---------YIHLP--LQSKW-L 107 (591)
Q Consensus 42 ~~~~~h~~~v~~l~~sp~~~~l~s~--~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~---------~~~~~--~~~~~-l 107 (591)
..+.+|...+..++|+++.-++++. +.++...||....+. ....+..+...+. ...|+ ||++. |
T Consensus 17 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~l 94 (662)
T 3azo_A 17 ALVASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADG--AEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLL 94 (662)
T ss_dssp HHHHHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTS--CEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEE
T ss_pred HHHhhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCC--CcceeCCCCccccccccccCCccceeeeecCCCeEE
Confidence 3466788999999999886666666 568899999974432 3455555655555 55565 99998 7
Q ss_pred EEEeC-CCcEEEEEee--e-eeeeceecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCCCCEEE
Q psy710 108 YVGTE-KGNIHVVNIE--S-FTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLA 183 (591)
Q Consensus 108 ~~~~~-d~~i~vwd~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 183 (591)
+.++. +..|+++++. . ++. ..+.... ...+...+..++|+|||+.|+
T Consensus 95 a~~~~~~~~l~~~~~~~~g~~~~-~~l~~~~----------------------------~~~~~~~~~~~~~spDg~~l~ 145 (662)
T 3azo_A 95 VFTHFGDQRLYAFEPDAPGGAVP-RPLTPVS----------------------------AVGGGLRWADPVLLPERGEVW 145 (662)
T ss_dssp EEEBTTTCCEEEECTTSTTCCCC-EECSCCC----------------------------CSTTCEEEEEEEEETTTTEEE
T ss_pred EEEECCCCeEEEEcCCCCCCCCC-EeccCCc----------------------------cCCCCccccCcEECCCCCEEE
Confidence 76654 4556666654 1 221 1111000 001344568999999999999
Q ss_pred EEeCC----------CcEEEeCCCC------eEEEEec-cCCCcEEEEEEEcCCceEEEEeCC--------CcEEEEEcc
Q psy710 184 IGTKT----------GSLRLLGRPG------VDAHVRH-ETDAAVIQMQFLTNEGALITATAD--------DSLHLWNFR 238 (591)
Q Consensus 184 ~~~~d----------g~i~i~d~~~------~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d--------~~i~~wd~~ 238 (591)
+++.+ ..|++||+.+ .+..... .+...+..++|+|||++|+.++.+ ..|++||+.
T Consensus 146 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~ 225 (662)
T 3azo_A 146 CMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVT 225 (662)
T ss_dssp EEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEEC
T ss_pred EEEecccCCCCCCceeEEEEEECCCCccccCCceeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEEC
Confidence 88876 5899999988 6665555 555678889999999999887754 379999998
Q ss_pred -CCCcceEEee-eeccccEEEEEecCCCCEEEEEeCCc--cEEEEEccCccccceeeehhhhccccccCCCCC-------
Q psy710 239 -QKRPEIVHSL-KFQRERITYIHLPLQSKWLYVGTEKG--NIHVVNIESFTLSGYIINWNKAIDVCMKTHPGP------- 307 (591)
Q Consensus 239 -~~~~~~~~~~-~~~~~~v~~~~~sp~~~~l~~~~~dg--~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 307 (591)
++.......+ ..+...+..+.|+|||+++++++.++ .|++||+.+++... ....+...
T Consensus 226 ~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~-----------l~~~~~~~~~p~w~~ 294 (662)
T 3azo_A 226 EDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQ-----------LCRREEEFAGPLWTP 294 (662)
T ss_dssp TTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEE-----------SSCCSSBSSCCCCST
T ss_pred CCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceee-----------cccccccccCccccc
Confidence 4421123333 34467899999999999888888888 56666665554321 11111111
Q ss_pred -eEEEecCCCCCCeEEEEEcCCEEEEE--ecccceEEEEeccCCCeeEEEEeecCCEE--EEEecCCc--EEEEecCCCC
Q psy710 308 -IIHLSDNPLDPSKLLLAYETGLVVHW--DLKLKRAEFRWQCSEPIKSVCWHYEGKQF--LCSHTDGT--ISTWAVRPLA 380 (591)
Q Consensus 308 -v~~~~~sp~~~~~l~~~~~dg~i~iw--d~~~~~~~~~~~~~~~v~~~~~sp~g~~l--~s~~~dg~--i~vwd~~~~~ 380 (591)
+..++|+| ++.++++++. +.++|| |+.+++......+...+..+ |+++++.+ ++++.+.. |.+||+. ++
T Consensus 295 ~~~~~~~~~-~~~~~~~~~~-~~~~l~~~d~~~~~~~~l~~~~~~~~~~-~s~~~~~~~~~~~~~~~~~~i~~~d~~-~g 370 (662)
T 3azo_A 295 GMRWFAPLA-NGLIAVVHGK-GAAVLGILDPESGELVDAAGPWTEWAAT-LTVSGTRAVGVAASPRTAYEVVELDTV-TG 370 (662)
T ss_dssp TCCSEEECT-TSCEEEEEBS-SSCEEEEEETTTTEEEECCSSCCEEEEE-EEEETTEEEEEEEETTEEEEEEEEETT-TC
T ss_pred cCceEeEeC-CCEEEEEEEc-CccEEEEEECCCCcEEEecCCCCeEEEE-EecCCCEEEEEEcCCCCCCEEEEEECC-CC
Confidence 45688999 8999999888 999999 66666654444465666665 25555543 34455544 5555655 44
Q ss_pred Cc
Q psy710 381 KP 382 (591)
Q Consensus 381 ~~ 382 (591)
+.
T Consensus 371 ~~ 372 (662)
T 3azo_A 371 RA 372 (662)
T ss_dssp CE
T ss_pred ce
Confidence 43
No 172
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.81 E-value=1.4e-16 Score=161.43 Aligned_cols=337 Identities=12% Similarity=0.102 Sum_probs=225.3
Q ss_pred CCCCcEEEEEeCCCcEEEEcCCC-ceeEeeccCCcceEEEEEeecCCEEEEecCCCeEEEEeec--ccCceeeeEEEeec
Q psy710 16 DPIQKLLAIGTKTGSLRLLGRPG-VDAHVRHETDAAVIQMQFLTNEGALITATADDSLHLWNFR--QKRPEIVHSLKFQR 92 (591)
Q Consensus 16 spdg~~la~g~~dg~i~lw~~~~-~~~~~~~~h~~~v~~l~~sp~~~~l~s~~~d~~i~vw~~~--~~~~~~~~~~~~~~ 92 (591)
+|.+.++++...++.|.++|... +.+..+.. ...+..+.|+|||+++++++.|+.|.+||+. +. +.+..+...
T Consensus 164 d~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~-g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~--~~v~~i~~G- 239 (567)
T 1qks_A 164 DLENLFSVTLRDAGQIALIDGSTYEIKTVLDT-GYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEP--TTVAEIKIG- 239 (567)
T ss_dssp CGGGEEEEEETTTTEEEEEETTTCCEEEEEEC-SSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSC--CEEEEEECC-
T ss_pred CCCceEEEEeCCCCeEEEEECCCCeEEEEEeC-CCCccceEECCCCCEEEEEcCCCeEEEEECCCCCC--cEeEEEecC-
Confidence 34455667777899999999884 44545543 3456799999999999999999999999996 44 456666653
Q ss_pred cceEEEEee----CCceEEEEEeC-CCcEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCcceeeeccCC
Q psy710 93 ERITYIHLP----LQSKWLYVGTE-KGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFP 167 (591)
Q Consensus 93 ~~v~~~~~~----~~~~~l~~~~~-d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (591)
.....++|+ |||+++++++. ++.+.++|..+.+.++.+......... . ..|+
T Consensus 240 ~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~----------------------~-~~~p 296 (567)
T 1qks_A 240 SEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDE----------------------Q-EYHP 296 (567)
T ss_dssp SEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTT----------------------C-CEES
T ss_pred CCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEecccccccc----------------------c-cccC
Confidence 346789999 69999988876 589999999888777665421110000 0 0011
Q ss_pred -CCceEEEECCCCCEEE-EEeCCCcEEEeCCCCeEE--EEeccCCCcEEEEEEEcCCceEEEEe-CCCcEEEEEccCCCc
Q psy710 168 -YQPTAIAFDPIQKLLA-IGTKTGSLRLLGRPGVDA--HVRHETDAAVIQMQFLTNEGALITAT-ADDSLHLWNFRQKRP 242 (591)
Q Consensus 168 -~~v~~~~~~~~~~~l~-~~~~dg~i~i~d~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~~wd~~~~~~ 242 (591)
..+..+..++++..++ ....+|.|.++|...... ............+.|+|++++++++. .++.|.++|+.++
T Consensus 297 ~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~-- 374 (567)
T 1qks_A 297 EPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEG-- 374 (567)
T ss_dssp CCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTT--
T ss_pred CCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCC--
Confidence 2467788888765544 445579999999865422 22222334677899999999887664 5788999999988
Q ss_pred ceEEeeee-----ccccEEEEEecCCCCEEE-EEe-CCccEEEEEccCccccceeeehhhhccccccCCCCCeEEEecCC
Q psy710 243 EIVHSLKF-----QRERITYIHLPLQSKWLY-VGT-EKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNP 315 (591)
Q Consensus 243 ~~~~~~~~-----~~~~v~~~~~sp~~~~l~-~~~-~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp 315 (591)
+.+..+.. |.+.-..+ ++|++..++ ++. .++.|.++|..+.+...+. |. ....+......-..+..+|
T Consensus 375 kl~~~i~vgg~~Phpg~g~~~-~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~--~k--vv~~i~~~g~g~~~i~~~p 449 (567)
T 1qks_A 375 KLVAIEDTGGQTPHPGRGANF-VHPTFGPVWATSHMGDDSVALIGTDPEGHPDNA--WK--ILDSFPALGGGSLFIKTHP 449 (567)
T ss_dssp EEEEEEECSSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTB--TS--EEEEEECSCSCCCCEECCT
T ss_pred cEEEEEeccCcCCCCccceee-ECCCCCcEEEeCCCCCCeEEEecCCCCCCcccc--CE--EEEEEecCCCCCEEEEeCC
Confidence 55554443 32212222 678755554 443 4689999999873211000 00 0112222223334577899
Q ss_pred CCCCeEEEEEc-------CCEEEEEecccc-----e-EEEEec---------cCCCeeEEEEeecCCEEEEEe-----cC
Q psy710 316 LDPSKLLLAYE-------TGLVVHWDLKLK-----R-AEFRWQ---------CSEPIKSVCWHYEGKQFLCSH-----TD 368 (591)
Q Consensus 316 ~~~~~l~~~~~-------dg~i~iwd~~~~-----~-~~~~~~---------~~~~v~~~~~sp~g~~l~s~~-----~d 368 (591)
+++++.+... ...|.++|+.+. . ....+. ....+..+.|+|+|+++..+. .+
T Consensus 450 -~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~s~~~~~~~~ 528 (567)
T 1qks_A 450 -NSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQGEFNKDGTEVWFSVWNGKDQE 528 (567)
T ss_dssp -TCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEEEEEECTTSSEEEEEEECCTTSC
T ss_pred -CCCeEEEecCCCCCcccCceEEEEECCcccccccCCCcEEeccccccccCCCCcceEeeeECCCCCEEEEEeecCCCCC
Confidence 9999888663 358999999876 2 112221 245789999999999887663 37
Q ss_pred CcEEEEecCCCCCceeeecc
Q psy710 369 GTISTWAVRPLAKPVSVNQP 388 (591)
Q Consensus 369 g~i~vwd~~~~~~~~~~~~~ 388 (591)
+.|.|+|.. +.++..++..
T Consensus 529 ~~i~v~D~~-t~~~~~~i~~ 547 (567)
T 1qks_A 529 SALVVVDDK-TLELKHVIKD 547 (567)
T ss_dssp CEEEEEETT-TTEEEEEECC
T ss_pred CcEEEEECC-CceEEEEeCC
Confidence 899999998 7777777664
No 173
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.80 E-value=4.1e-17 Score=157.64 Aligned_cols=266 Identities=6% Similarity=0.002 Sum_probs=184.6
Q ss_pred cceEEEEEeecCCEEEEec---------CCCeEEEEeecccCceeeeEEEeeccceEEEEeeCCceEEEEEeCC---C--
Q psy710 49 AAVIQMQFLTNEGALITAT---------ADDSLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEK---G-- 114 (591)
Q Consensus 49 ~~v~~l~~sp~~~~l~s~~---------~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---~-- 114 (591)
..+..+++ ||++++... .++.|.+|++.+++. ..+ ..+..++|+|||+.|+..+.+ +
T Consensus 15 ~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~---~~l----~~~~~~~~SpDg~~la~~~~~~~~~~~ 85 (347)
T 2gop_A 15 AYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNAR---RFI----ENATMPRISPDGKKIAFMRANEEKKVS 85 (347)
T ss_dssp CEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCE---EEE----ESCEEEEECTTSSEEEEEEEETTTTEE
T ss_pred EEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCce---EEc----ccCCCeEECCCCCEEEEEEeccCCCcc
Confidence 45667777 888887542 256789999988752 223 567889999999999987753 2
Q ss_pred cEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCCCCEEEEEeCC------
Q psy710 115 NIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTKT------ 188 (591)
Q Consensus 115 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d------ 188 (591)
.|++|++.+++...... ... +..++|+||++.|+.++.+
T Consensus 86 ~l~~~~~~~g~~~~l~~----------------------------------~~~-~~~~~wspdg~~l~~~~~~~~~~~~ 130 (347)
T 2gop_A 86 EIWVADLETLSSKKILE----------------------------------AKN-IRSLEWNEDSRKLLIVGFKRREDED 130 (347)
T ss_dssp EEEEEETTTTEEEEEEE----------------------------------ESE-EEEEEECTTSSEEEEEEECCCC---
T ss_pred eEEEEECCCCceEEEEc----------------------------------CCC-ccceeECCCCCEEEEEEccCCCcCC
Confidence 37777777655433222 122 6899999999988887632
Q ss_pred ---------------------CcEEEeCCCCeEE-EEeccCCCcEEEEEEEcCCceEEEEeCCC-------cEEEEEccC
Q psy710 189 ---------------------GSLRLLGRPGVDA-HVRHETDAAVIQMQFLTNEGALITATADD-------SLHLWNFRQ 239 (591)
Q Consensus 189 ---------------------g~i~i~d~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-------~i~~wd~~~ 239 (591)
..|++||+.+++. ..... . .+..+.|+|+| .++++..++ ...+|.+.+
T Consensus 131 ~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~ 207 (347)
T 2gop_A 131 FIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWED 207 (347)
T ss_dssp ------CCCC---------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEET
T ss_pred cEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCCCe-EEEEEecccccccccccccEEEeCC
Confidence 5688999987766 33333 3 78899999999 777775542 445555553
Q ss_pred CCcceEEeeeeccccEEEEEecCCCCEEEEEeCC--------ccEEEEEccCccccceeeehhhhccccccCCCCCeEE-
Q psy710 240 KRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEK--------GNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIH- 310 (591)
Q Consensus 240 ~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d--------g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~- 310 (591)
+ ....+..+ ..+..+ +|||++|+.++.+ ..|.+|| +++. ......+...+..
T Consensus 208 ~---~~~~l~~~-~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~-----------~~l~~~~~~~~~~~ 268 (347)
T 2gop_A 208 G---KEEKMFEK-VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--GKEV-----------MGILDEVDRGVGQA 268 (347)
T ss_dssp T---EEEEEEEE-ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--SSCE-----------EESSTTCCSEEEEE
T ss_pred C---ceEEeccC-cceeeE--CCCCCEEEEEEccccCCccccceEEEEC--CCce-----------EeccccCCcccCCc
Confidence 3 33344444 455544 8999988877754 3677777 4333 1234456677876
Q ss_pred EecCCCCCCeEEEEEcCCEEEEEecccceEEEEeccCCCeeEEEEeecCCEEEEEecCCcE-EEEecCCCCCceeeeccc
Q psy710 311 LSDNPLDPSKLLLAYETGLVVHWDLKLKRAEFRWQCSEPIKSVCWHYEGKQFLCSHTDGTI-STWAVRPLAKPVSVNQPH 389 (591)
Q Consensus 311 ~~~sp~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~g~~l~s~~~dg~i-~vwd~~~~~~~~~~~~~~ 389 (591)
+.|+ ++ ++++++.++.++|| +.+++......+...|.+++|+| .++++++.++.. .+|.++ ++ ...+..+
T Consensus 269 ~~~s--dg-~~~~~~~~~~~~l~-~~~g~~~~~~~~~~~v~~~~~s~--~~~~~~~~~~~~~~l~~~~--g~-~~~lt~~ 339 (347)
T 2gop_A 269 KIKD--GK-VYFTLFEEGSVNLY-IWDGEIKPIAKGRHWIMGFDVDE--IVVYLKETATRLRELFTWD--GE-EKQLTDY 339 (347)
T ss_dssp EEET--TE-EEEEEEETTEEEEE-EESSSEEEEECSSSEEEEEEESS--SEEEEEECSSSCCEEEEES--SS-EEECCCT
T ss_pred cEEc--Cc-EEEEEecCCcEEEE-EcCCceEEEecCCCeEEeeeeeC--cEEEEEcCCCChHHheEeC--Cc-EEEeccc
Confidence 8897 56 88889999999999 88777766666778899999999 677777777765 788776 33 4445555
No 174
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.80 E-value=2.5e-17 Score=159.11 Aligned_cols=265 Identities=8% Similarity=0.010 Sum_probs=177.5
Q ss_pred CCcEEEeCCCCcEEEEEe---------CCCcEEEEcCCCceeEeeccCCcceEEEEEeecCCEEEEecCC---Ce--EEE
Q psy710 9 QPTAIAFDPIQKLLAIGT---------KTGSLRLLGRPGVDAHVRHETDAAVIQMQFLTNEGALITATAD---DS--LHL 74 (591)
Q Consensus 9 ~v~~~~~spdg~~la~g~---------~dg~i~lw~~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~~~d---~~--i~v 74 (591)
.+...++ ||+++|... .++.|.+|++.+.....+ ..+..++|||||++|+.++.+ +. |.+
T Consensus 16 ~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l----~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~ 89 (347)
T 2gop_A 16 YLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARRFI----ENATMPRISPDGKKIAFMRANEEKKVSEIWV 89 (347)
T ss_dssp EEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEEE----ESCEEEEECTTSSEEEEEEEETTTTEEEEEE
T ss_pred EcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceEEc----ccCCCeEECCCCCEEEEEEeccCCCcceEEE
Confidence 4567778 898888652 256799999886555555 568899999999999987653 34 666
Q ss_pred EeecccCceeeeEEEeeccceEEEEeeCCceEEEEEeCC---------------------------CcEEEEEeeeeeee
Q psy710 75 WNFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEK---------------------------GNIHVVNIESFTLS 127 (591)
Q Consensus 75 w~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---------------------------~~i~vwd~~~~~~~ 127 (591)
|++.+++ . ..+..+.. +..++|+||++.|+.++.+ ..|++||+.+++..
T Consensus 90 ~~~~~g~--~-~~l~~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~ 165 (347)
T 2gop_A 90 ADLETLS--S-KKILEAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVI 165 (347)
T ss_dssp EETTTTE--E-EEEEEESE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEE
T ss_pred EECCCCc--e-EEEEcCCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEE
Confidence 6776653 2 33333344 8999999999999887642 46777887765542
Q ss_pred ceecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCCCCEEEEEeCCC---------cEEEeCCCC
Q psy710 128 GYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTKTG---------SLRLLGRPG 198 (591)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg---------~i~i~d~~~ 198 (591)
..+. . . .+..++|+|++ +++++..++ .|+++| +
T Consensus 166 ~~l~--------------------------------~--~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d--~ 207 (347)
T 2gop_A 166 EEFE--------------------------------K--P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWE--D 207 (347)
T ss_dssp EEEE--------------------------------E--E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEE--T
T ss_pred eeec--------------------------------C--C-CcccccCCCCe-EEEEEecccccccccccccEEEeC--C
Confidence 2222 1 1 46789999999 777776542 455566 4
Q ss_pred eEEEEeccCCCcEEEEEEEcCCceEEEEeCC--------CcEEEEEccCCCcceEEeeeeccccEEE-EEecCCCCEEEE
Q psy710 199 VDAHVRHETDAAVIQMQFLTNEGALITATAD--------DSLHLWNFRQKRPEIVHSLKFQRERITY-IHLPLQSKWLYV 269 (591)
Q Consensus 199 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--------~~i~~wd~~~~~~~~~~~~~~~~~~v~~-~~~sp~~~~l~~ 269 (591)
++......+ ..+..+ +|+|++|+.++.+ ..|.+|| ++ +.......+...+.. +.|+ ++ ++++
T Consensus 208 ~~~~~l~~~-~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~--~~~~l~~~~~~~~~~~~~~s-dg-~~~~ 278 (347)
T 2gop_A 208 GKEEKMFEK-VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--GK--EVMGILDEVDRGVGQAKIKD-GK-VYFT 278 (347)
T ss_dssp TEEEEEEEE-ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--SS--CEEESSTTCCSEEEEEEEET-TE-EEEE
T ss_pred CceEEeccC-cceeeE--CCCCCEEEEEEccccCCccccceEEEEC--CC--ceEeccccCCcccCCccEEc-Cc-EEEE
Confidence 443333222 344444 9999998887654 3577777 44 344444455667876 8999 88 8889
Q ss_pred EeCCccEEEEEccCccccceeeehhhhccccccCCCCCeEEEecCCCCCCeEEEEEcCCEE-EEEecccceEEEEeccC
Q psy710 270 GTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKLLLAYETGLV-VHWDLKLKRAEFRWQCS 347 (591)
Q Consensus 270 ~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i-~iwd~~~~~~~~~~~~~ 347 (591)
++.++.+++| +.+++.. .+..+...|.+++|+| ..+++++.++.. .+|.+. ++..+...+.
T Consensus 279 ~~~~~~~~l~-~~~g~~~------------~~~~~~~~v~~~~~s~---~~~~~~~~~~~~~~l~~~~-g~~~~lt~~n 340 (347)
T 2gop_A 279 LFEEGSVNLY-IWDGEIK------------PIAKGRHWIMGFDVDE---IVVYLKETATRLRELFTWD-GEEKQLTDYN 340 (347)
T ss_dssp EEETTEEEEE-EESSSEE------------EEECSSSEEEEEEESS---SEEEEEECSSSCCEEEEES-SSEEECCCTT
T ss_pred EecCCcEEEE-EcCCceE------------EEecCCCeEEeeeeeC---cEEEEEcCCCChHHheEeC-CcEEEecccc
Confidence 9999999999 8744331 2233467889999998 677777776654 667665 5544433333
No 175
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.78 E-value=2.1e-18 Score=170.09 Aligned_cols=277 Identities=11% Similarity=-0.004 Sum_probs=181.7
Q ss_pred cCC-CceeEeeccCCcc-----eEEEEEeecCCEEEEecCC---CeEEEEeecccCceeeeEEEeeccceE-EEEeeCCc
Q psy710 35 GRP-GVDAHVRHETDAA-----VIQMQFLTNEGALITATAD---DSLHLWNFRQKRPEIVHSLKFQRERIT-YIHLPLQS 104 (591)
Q Consensus 35 ~~~-~~~~~~~~~h~~~-----v~~l~~sp~~~~l~s~~~d---~~i~vw~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~ 104 (591)
|.. +..+..+..+... +..++|+|||++|+....+ ..|.+||+.+++ ...+..+...+. .+.|+||+
T Consensus 16 d~~~g~~~~~l~~~~~~~~~~~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~---~~~l~~~~~~~~~~~~~spdg 92 (396)
T 3c5m_A 16 DSDTQVKVTRLTPTDIICHRNYFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQ---AVQLTEGKGDNTFGGFISTDE 92 (396)
T ss_dssp CTTTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTE---EEECCCSSCBCTTTCEECTTS
T ss_pred cCCCCcceEEEecCCCCccceeeecCcCCCCCCEEEEEEecCCCceEEEEECCCCc---EEEeecCCCCccccceECCCC
Confidence 444 5556666555433 7788999999998876542 467788887763 233333333333 37899999
Q ss_pred eEEEEEeCCCcEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCCCCEEEE
Q psy710 105 KWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAI 184 (591)
Q Consensus 105 ~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 184 (591)
+.|+..+.++.|++||+.+++...... .+.. |+++++.|+.
T Consensus 93 ~~l~~~~~~~~l~~~d~~~~~~~~~~~---------------------------------~~~~------~~~~g~~l~~ 133 (396)
T 3c5m_A 93 RAFFYVKNELNLMKVDLETLEEQVIYT---------------------------------VDEE------WKGYGTWVAN 133 (396)
T ss_dssp SEEEEEETTTEEEEEETTTCCEEEEEE---------------------------------CCTT------EEEEEEEEEC
T ss_pred CEEEEEEcCCcEEEEECCCCCcEEEEe---------------------------------cccc------cCCCCCEEEe
Confidence 999999998899999988765433221 0111 5556666665
Q ss_pred EeCCCcEEEeCCCCeEEEEeccCCCcEEEEEEEcCCceEEEE-----eCCCcEEEEEccCCCcceEEeeeeccccEEEEE
Q psy710 185 GTKTGSLRLLGRPGVDAHVRHETDAAVIQMQFLTNEGALITA-----TADDSLHLWNFRQKRPEIVHSLKFQRERITYIH 259 (591)
Q Consensus 185 ~~~dg~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-----~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~ 259 (591)
...+....+|. ..+.|+|+++.++.. ..+..|.+||+.+++ ... +..+...+..+.
T Consensus 134 ~~~~~~~~~~~----------------~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~--~~~-~~~~~~~~~~~~ 194 (396)
T 3c5m_A 134 SDCTKLVGIEI----------------LKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGE--LEV-IHQDTAWLGHPI 194 (396)
T ss_dssp TTSSEEEEEEE----------------EGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCC--EEE-EEEESSCEEEEE
T ss_pred ccCCccccccc----------------cccccCCCCcceeeeeeccCCCcceEEEEECCCCc--EEe-eccCCcccccce
Confidence 54444333321 124577888877654 356689999998873 332 234557789999
Q ss_pred ecC-CCCEEEEEeCC------ccEEEEEccCccccceeeehhhhccccccCC--CCCeEEEecCCCCCCeEEEEEcC---
Q psy710 260 LPL-QSKWLYVGTEK------GNIHVVNIESFTLSGYIINWNKAIDVCMKTH--PGPIIHLSDNPLDPSKLLLAYET--- 327 (591)
Q Consensus 260 ~sp-~~~~l~~~~~d------g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~sp~~~~~l~~~~~d--- 327 (591)
|+| +++.|+..+.+ ..|.+||+...+.. .+..+ ...+..++|+| ++++|+.++.+
T Consensus 195 ~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~------------~l~~~~~~~~~~~~~~sp-dg~~l~~~~~~~~~ 261 (396)
T 3c5m_A 195 YRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVR------------KIKEHAEGESCTHEFWIP-DGSAMAYVSYFKGQ 261 (396)
T ss_dssp EETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCE------------ESSCCCTTEEEEEEEECT-TSSCEEEEEEETTT
T ss_pred ECCCCCCEEEEEecCCCCCCCceEEEEECCCCcee------------EeeccCCCccccceEECC-CCCEEEEEecCCCC
Confidence 999 78877766543 36888888765432 11222 23578899999 99988877654
Q ss_pred --CEEEEEecccceEEEEeccCCCeeEEEEee-cCCEEEEEe----------------cCCcEEEEecCCCCCceeeecc
Q psy710 328 --GLVVHWDLKLKRAEFRWQCSEPIKSVCWHY-EGKQFLCSH----------------TDGTISTWAVRPLAKPVSVNQP 388 (591)
Q Consensus 328 --g~i~iwd~~~~~~~~~~~~~~~v~~~~~sp-~g~~l~s~~----------------~dg~i~vwd~~~~~~~~~~~~~ 388 (591)
+.|++||+.+++......... .. ++|+| ||+++++++ .++.|++||+. +++. ..+..
T Consensus 262 ~~~~l~~~d~~~g~~~~l~~~~~-~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~-~~~~-~~l~~ 337 (396)
T 3c5m_A 262 TDRVIYKANPETLENEEVMVMPP-CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTK-AKSA-QKLCK 337 (396)
T ss_dssp CCEEEEEECTTTCCEEEEEECCS-EE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETT-TTBC-CEEEE
T ss_pred ccceEEEEECCCCCeEEeeeCCC-CC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecc-cCce-EEccC
Confidence 559999999887665443222 33 89999 999888765 34679999998 4543 34444
Q ss_pred c
Q psy710 389 H 389 (591)
Q Consensus 389 ~ 389 (591)
+
T Consensus 338 ~ 338 (396)
T 3c5m_A 338 H 338 (396)
T ss_dssp C
T ss_pred C
Confidence 4
No 176
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.78 E-value=1.8e-16 Score=148.56 Aligned_cols=242 Identities=8% Similarity=0.119 Sum_probs=176.1
Q ss_pred cCCCCCCcEEEeCCCCcEEEEEeCCCcEEEEcCCCceeEeec------cCCcceEEEEEe-ecCCEEEEecC-CCeEEEE
Q psy710 4 HGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGVDAHVRH------ETDAAVIQMQFL-TNEGALITATA-DDSLHLW 75 (591)
Q Consensus 4 ~gh~~~v~~~~~spdg~~la~g~~dg~i~lw~~~~~~~~~~~------~h~~~v~~l~~s-p~~~~l~s~~~-d~~i~vw 75 (591)
.|+-..+.+++++++|+++++...++.|.+||.++.....+. .|...+..+++. ++++++++... ++.|.+|
T Consensus 26 ~g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~ 105 (286)
T 1q7f_A 26 EGQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIY 105 (286)
T ss_dssp TTCBSCEEEEEECTTCCEEEEEGGGTEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEE
T ss_pred CCccCCCceEEECCCCCEEEEECCCCEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEE
Confidence 355677899999999998888888999999998876665553 244678999995 66666666533 7899999
Q ss_pred eecccCceeeeEEEe-eccceEEEEeeCCceEEEEEeCCCcEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCC
Q psy710 76 NFRQKRPEIVHSLKF-QRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDN 154 (591)
Q Consensus 76 ~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (591)
+ .+++ .+..+.. +...+..++++++++.+++...++.|.+|+... +....+..
T Consensus 106 d-~~g~--~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g-~~~~~~~~---------------------- 159 (286)
T 1q7f_A 106 N-QYGQ--FVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNG-NVLHKFGC---------------------- 159 (286)
T ss_dssp C-TTSC--EEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTS-CEEEEEEC----------------------
T ss_pred C-CCCc--EEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCCC-CEEEEeCC----------------------
Confidence 9 4443 3444432 335688999999999777777788999998643 32222210
Q ss_pred CcCcceeeeccCCCCceEEEECCCCCEEEEEeCCCcEEEeCCCCeEEEEeccC--CCcEEEEEEEcCCceEEEEeCCC-c
Q psy710 155 PLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGVDAHVRHET--DAAVIQMQFLTNEGALITATADD-S 231 (591)
Q Consensus 155 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~~~d~-~ 231 (591)
.+....+..++++++++++++...++.|++|+............ ...+..++++++|+++++...++ .
T Consensus 160 ---------~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~ 230 (286)
T 1q7f_A 160 ---------SKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFN 230 (286)
T ss_dssp ---------TTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETTCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCE
T ss_pred ---------CCccCCcEEEEECCCCCEEEEECCCCEEEEEcCCCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEE
Confidence 01234578999999999877777899999999866544333222 25789999999998888887775 9
Q ss_pred EEEEEccCCCcceEEeeeecc--ccEEEEEecCCCCEEEEEeCCccEEEEEccCc
Q psy710 232 LHLWNFRQKRPEIVHSLKFQR--ERITYIHLPLQSKWLYVGTEKGNIHVVNIESF 284 (591)
Q Consensus 232 i~~wd~~~~~~~~~~~~~~~~--~~v~~~~~sp~~~~l~~~~~dg~i~i~d~~~~ 284 (591)
|.+||... +.+..+..+. ..+..++++|+|+++++ +.++.|++|++...
T Consensus 231 i~~~~~~g---~~~~~~~~~~~~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~~~~ 281 (286)
T 1q7f_A 231 LTIFTQDG---QLISALESKVKHAQCFDVALMDDGSVVLA-SKDYRLYIYRYVQL 281 (286)
T ss_dssp EEEECTTS---CEEEEEEESSCCSCEEEEEEETTTEEEEE-ETTTEEEEEECSCC
T ss_pred EEEECCCC---CEEEEEcccCCCCcceeEEECCCCcEEEE-CCCCeEEEEEcccc
Confidence 99999643 4555555442 24789999999986666 67899999997653
No 177
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.78 E-value=7.4e-17 Score=154.84 Aligned_cols=277 Identities=10% Similarity=0.055 Sum_probs=191.2
Q ss_pred CCCcEEEeCCCCcEEEEEeCCCcEEEEcCCCceeEeeccCCcceEEEEEeecCCEEEEecCCCeEEEEeecccCceeeeE
Q psy710 8 YQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGVDAHVRHETDAAVIQMQFLTNEGALITATADDSLHLWNFRQKRPEIVHS 87 (591)
Q Consensus 8 ~~v~~~~~spdg~~la~g~~dg~i~lw~~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~~~d~~i~vw~~~~~~~~~~~~ 87 (591)
..|.+++|++++..++..+.++.++.| .+.....+..+...+.+++|+|++++++++..++.|.+||.++++ ....
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~--~~~~ 81 (333)
T 2dg1_A 6 QDLPTLFYSGKSNSAVPIISESELQTI--TAEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKE--IKRP 81 (333)
T ss_dssp CCCCBCCSCGGGGCSSCCCCGGGSCEE--ECEEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCC--EEEE
T ss_pred cccceeeecCCccceeEEeecccCccc--ccceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCc--EEEE
Confidence 458899999999888877788899999 455566677777788999999999987788889999999998775 2222
Q ss_pred EEeeccceEEEEeeCCceEEEEEeCC----CcEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCcceeee
Q psy710 88 LKFQRERITYIHLPLQSKWLYVGTEK----GNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFR 163 (591)
Q Consensus 88 ~~~~~~~v~~~~~~~~~~~l~~~~~d----~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (591)
...+...+.+++++++++++++...+ +.|.+||..++.....+..
T Consensus 82 ~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~------------------------------- 130 (333)
T 2dg1_A 82 FVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIED------------------------------- 130 (333)
T ss_dssp EECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECS-------------------------------
T ss_pred eeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEcc-------------------------------
Confidence 22456779999999999887777665 6899999877543322110
Q ss_pred ccCCCCceEEEECCCCCEEEEEeC------CCcEEEeCCCCeEEEEeccCCCcEEEEEEEcCCceEEEE-eCCCcEEEEE
Q psy710 164 HGFPYQPTAIAFDPIQKLLAIGTK------TGSLRLLGRPGVDAHVRHETDAAVIQMQFLTNEGALITA-TADDSLHLWN 236 (591)
Q Consensus 164 ~~~~~~v~~~~~~~~~~~l~~~~~------dg~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~~wd 236 (591)
......+..++++|+++++++... .+.|..++..+.+..........+..++|+|+++.|+.+ ..++.|.+||
T Consensus 131 ~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d 210 (333)
T 2dg1_A 131 LSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIA 210 (333)
T ss_dssp SSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEE
T ss_pred CccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecCCCcccceEECCCCCEEEEEeCCCCeEEEEE
Confidence 012345789999999987776553 367888887765443332223367899999999866544 5678999999
Q ss_pred ccCCCcceEE--------eeeeccccEEEEEecCCCCEEEEEeCCccEEEEEccCccccceeeehhhhccccccCCCCCe
Q psy710 237 FRQKRPEIVH--------SLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPI 308 (591)
Q Consensus 237 ~~~~~~~~~~--------~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v 308 (591)
+.+.. ..+. .+..+ ..+..++++++|++.++...++.|.+||........ +.. .....+|...+
T Consensus 211 ~~~~g-~~~~~~~~~~~~~~~~~-~~~~~i~~d~~G~l~v~~~~~~~v~~~d~~g~~~~~--~~~----~~~~~g~~~~~ 282 (333)
T 2dg1_A 211 LEDDG-VTIQPFGATIPYYFTGH-EGPDSCCIDSDDNLYVAMYGQGRVLVFNKRGYPIGQ--ILI----PGRDEGHMLRS 282 (333)
T ss_dssp ECTTS-SSEEEEEEEEEEECCSS-SEEEEEEEBTTCCEEEEEETTTEEEEECTTSCEEEE--EEC----TTGGGTCSCBC
T ss_pred ecCCC-cCcccccceEEEecCCC-CCCCceEECCCCCEEEEEcCCCEEEEECCCCCEEEE--EEc----CCCccccccCc
Confidence 96421 1111 11112 467889999999977777778899999985332210 000 00001223368
Q ss_pred EEEecCCCCCCeEEEEEcCC
Q psy710 309 IHLSDNPLDPSKLLLAYETG 328 (591)
Q Consensus 309 ~~~~~sp~~~~~l~~~~~dg 328 (591)
.+++|+| +++.|++++.++
T Consensus 283 ~~~~~~~-dg~~L~v~~~~g 301 (333)
T 2dg1_A 283 THPQFIP-GTNQLIICSNDI 301 (333)
T ss_dssp CEEEECT-TSCEEEEEEECG
T ss_pred ceEEECC-CCCEEEEEeCcc
Confidence 8999999 887777666553
No 178
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.77 E-value=6.3e-16 Score=144.77 Aligned_cols=243 Identities=10% Similarity=0.033 Sum_probs=171.3
Q ss_pred eccceEEEEeeCCceEEEEEeCCCcEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCc
Q psy710 91 QRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQP 170 (591)
Q Consensus 91 ~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 170 (591)
+-..+.+++++++++++++...++.|.+||.. ++....+..... ..++...+
T Consensus 28 ~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~---------------------------~~~~~~~p 79 (286)
T 1q7f_A 28 QFTEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGK---------------------------RDSQLLYP 79 (286)
T ss_dssp CBSCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSS---------------------------STTCBSSE
T ss_pred ccCCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCC---------------------------CcccccCc
Confidence 34568889999999988887888999999976 433333221000 01223457
Q ss_pred eEEEE-CCCCCEEEEEeC-CCcEEEeCCCCeEEEEec-cCCCcEEEEEEEcCCceEEEEeCCCcEEEEEccCCCcceEEe
Q psy710 171 TAIAF-DPIQKLLAIGTK-TGSLRLLGRPGVDAHVRH-ETDAAVIQMQFLTNEGALITATADDSLHLWNFRQKRPEIVHS 247 (591)
Q Consensus 171 ~~~~~-~~~~~~l~~~~~-dg~i~i~d~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~ 247 (591)
..+++ .++++++++... ++.|.+|+.......... .....+..++++++++.+++...++.|.+||... +.+..
T Consensus 80 ~~i~~~~~~g~l~v~~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g---~~~~~ 156 (286)
T 1q7f_A 80 NRVAVVRNSGDIIVTERSPTHQIQIYNQYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNG---NVLHK 156 (286)
T ss_dssp EEEEEETTTTEEEEEECGGGCEEEEECTTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTS---CEEEE
T ss_pred eEEEEEcCCCeEEEEcCCCCCEEEEECCCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCCC---CEEEE
Confidence 89999 577776666543 889999996554433222 2235789999999998777777788999999653 34444
Q ss_pred ee--eccccEEEEEecCCCCEEEEEeCCccEEEEEccCccccceeeehhhhccccccCCCCCeEEEecCCCCCCeEEEEE
Q psy710 248 LK--FQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKLLLAY 325 (591)
Q Consensus 248 ~~--~~~~~v~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~ 325 (591)
+. .+...+..++++|+|+++++...++.|++||....... .....++...+..+++++ +++++++..
T Consensus 157 ~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~----------~~~~~g~~~~p~~i~~d~-~G~l~v~~~ 225 (286)
T 1q7f_A 157 FGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQYLR----------QIGGEGITNYPIGVGINS-NGEILIADN 225 (286)
T ss_dssp EECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETTCCEEE----------EESCTTTSCSEEEEEECT-TCCEEEEEC
T ss_pred eCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCCCCEEE----------EEccCCccCCCcEEEECC-CCCEEEEeC
Confidence 43 23356899999999997777777899999997543221 011123346789999999 998888877
Q ss_pred cCC-EEEEEecccceEEEEec-c--CCCeeEEEEeecCCEEEEEecCCcEEEEecC
Q psy710 326 ETG-LVVHWDLKLKRAEFRWQ-C--SEPIKSVCWHYEGKQFLCSHTDGTISTWAVR 377 (591)
Q Consensus 326 ~dg-~i~iwd~~~~~~~~~~~-~--~~~v~~~~~sp~g~~l~s~~~dg~i~vwd~~ 377 (591)
.++ .|++||.. ++.+..+. + ...+.+++++|+|+++++ +.|+.|++|++.
T Consensus 226 ~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~~ 279 (286)
T 1q7f_A 226 HNNFNLTIFTQD-GQLISALESKVKHAQCFDVALMDDGSVVLA-SKDYRLYIYRYV 279 (286)
T ss_dssp SSSCEEEEECTT-SCEEEEEEESSCCSCEEEEEEETTTEEEEE-ETTTEEEEEECS
T ss_pred CCCEEEEEECCC-CCEEEEEcccCCCCcceeEEECCCCcEEEE-CCCCeEEEEEcc
Confidence 776 99999965 44444443 2 234779999999987777 679999999987
No 179
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.77 E-value=1.4e-16 Score=152.85 Aligned_cols=273 Identities=13% Similarity=0.096 Sum_probs=188.0
Q ss_pred cceEEEEEeecCCEEEEecCCCeEEEEeecccCceeeeEEEeeccceEEEEeeCCceEEEEEeCCCcEEEEEeeeeeeec
Q psy710 49 AAVIQMQFLTNEGALITATADDSLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSG 128 (591)
Q Consensus 49 ~~v~~l~~sp~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~ 128 (591)
..|.+++|++++..++..+.++.++.|. + .....+..+...+.+++|++++++++++..++.|.+||..+++...
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~ 80 (333)
T 2dg1_A 6 QDLPTLFYSGKSNSAVPIISESELQTIT---A--EPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKR 80 (333)
T ss_dssp CCCCBCCSCGGGGCSSCCCCGGGSCEEE---C--EEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEE
T ss_pred cccceeeecCCccceeEEeecccCcccc---c--ceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEE
Confidence 4577888999988887777888999992 2 3455666666778999999999987788888999999988765433
Q ss_pred eecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCCCCEEEEEeCC----CcEEEeCCCCeEEEEe
Q psy710 129 YIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTKT----GSLRLLGRPGVDAHVR 204 (591)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----g~i~i~d~~~~~~~~~ 204 (591)
... .+...+.+++++|+++++++...+ +.|.+||..+......
T Consensus 81 ~~~---------------------------------~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~ 127 (333)
T 2dg1_A 81 PFV---------------------------------SHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDI 127 (333)
T ss_dssp EEE---------------------------------CSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEE
T ss_pred Eee---------------------------------CCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEE
Confidence 221 123557999999999987777666 6899999887654422
Q ss_pred ---ccCCCcEEEEEEEcCCceEEEEeC------CCcEEEEEccCCCcceEEeeeeccccEEEEEecCCCCEEEEE-eCCc
Q psy710 205 ---HETDAAVIQMQFLTNEGALITATA------DDSLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVG-TEKG 274 (591)
Q Consensus 205 ---~~~~~~v~~~~~~~~~~~l~~~~~------d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~-~~dg 274 (591)
......+..++++|+|+.+++... .+.|..+|..++ +.. .+......+..++|+|+++.++++ +.++
T Consensus 128 ~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~--~~~-~~~~~~~~~~~i~~~~dg~~l~v~~~~~~ 204 (333)
T 2dg1_A 128 IEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFR--TVT-PIIQNISVANGIALSTDEKVLWVTETTAN 204 (333)
T ss_dssp ECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSC--CEE-EEEEEESSEEEEEECTTSSEEEEEEGGGT
T ss_pred EccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCC--EEE-EeecCCCcccceEECCCCCEEEEEeCCCC
Confidence 123457899999999987776653 244555555544 222 222333457889999999866554 5578
Q ss_pred cEEEEEccC-ccccceeeehhhhccccccCCCCCeEEEecCCCCCCeEEEEEcCCEEEEEecccceEEEEec-cCC----
Q psy710 275 NIHVVNIES-FTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKLLLAYETGLVVHWDLKLKRAEFRWQ-CSE---- 348 (591)
Q Consensus 275 ~i~i~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~~---- 348 (591)
.|.+|++.+ +..... . .......+.++ ..+..+++++ +++++++...++.|.+||.. ++....+. +..
T Consensus 205 ~i~~~d~~~~g~~~~~-~--~~~~~~~~~~~-~~~~~i~~d~-~G~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~g~ 278 (333)
T 2dg1_A 205 RLHRIALEDDGVTIQP-F--GATIPYYFTGH-EGPDSCCIDS-DDNLYVAMYGQGRVLVFNKR-GYPIGQILIPGRDEGH 278 (333)
T ss_dssp EEEEEEECTTSSSEEE-E--EEEEEEECCSS-SEEEEEEEBT-TCCEEEEEETTTEEEEECTT-SCEEEEEECTTGGGTC
T ss_pred eEEEEEecCCCcCccc-c--cceEEEecCCC-CCCCceEECC-CCCEEEEEcCCCEEEEECCC-CCEEEEEEcCCCcccc
Confidence 999999864 221100 0 00000112222 4678899999 99888877788999999985 55555554 222
Q ss_pred --CeeEEEEeecCCEEEEEecC
Q psy710 349 --PIKSVCWHYEGKQFLCSHTD 368 (591)
Q Consensus 349 --~v~~~~~sp~g~~l~s~~~d 368 (591)
.+.+++|+||++.|+.++.+
T Consensus 279 ~~~~~~~~~~~dg~~L~v~~~~ 300 (333)
T 2dg1_A 279 MLRSTHPQFIPGTNQLIICSND 300 (333)
T ss_dssp SCBCCEEEECTTSCEEEEEEEC
T ss_pred ccCcceEEECCCCCEEEEEeCc
Confidence 58999999998777766655
No 180
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.77 E-value=1.6e-16 Score=151.76 Aligned_cols=248 Identities=10% Similarity=0.021 Sum_probs=177.6
Q ss_pred CCCcEEEeCCCCcEEEEEeCC------------------------CcEEEEcCC-CceeEeec-cCCcceEEEEEeecCC
Q psy710 8 YQPTAIAFDPIQKLLAIGTKT------------------------GSLRLLGRP-GVDAHVRH-ETDAAVIQMQFLTNEG 61 (591)
Q Consensus 8 ~~v~~~~~spdg~~la~g~~d------------------------g~i~lw~~~-~~~~~~~~-~h~~~v~~l~~sp~~~ 61 (591)
+.+.+++++|+|+++++...+ +.|.+||.. +.....+. .+-.....++++|+|+
T Consensus 24 ~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~ 103 (329)
T 3fvz_A 24 GQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGN 103 (329)
T ss_dssp SCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTSC
T ss_pred CCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCCC
Confidence 568999999999999888776 479999987 55444443 4446789999999999
Q ss_pred EEEEecCCCeEEEEeecccCceeeeEE---------EeeccceEEEEeeC-CceEEEEEe-CCCcEEEEEeeeeeeecee
Q psy710 62 ALITATADDSLHLWNFRQKRPEIVHSL---------KFQRERITYIHLPL-QSKWLYVGT-EKGNIHVVNIESFTLSGYI 130 (591)
Q Consensus 62 ~l~s~~~d~~i~vw~~~~~~~~~~~~~---------~~~~~~v~~~~~~~-~~~~l~~~~-~d~~i~vwd~~~~~~~~~~ 130 (591)
++++...++.|++|+.+... ..+..+ ..+......++++| +++.+++.+ .++.|++|+ .+++....+
T Consensus 104 l~v~d~~~~~v~~~~~~g~~-~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~~ 181 (329)
T 3fvz_A 104 YWVTDVALHQVFKLDPHSKE-GPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQW 181 (329)
T ss_dssp EEEEETTTTEEEEECTTCSS-CCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSCEEEEE
T ss_pred EEEEECCCCEEEEEeCCCCe-EEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEEEe
Confidence 88888889999999986542 133433 22334688999999 777777775 589999999 445544443
Q ss_pred cccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCC-CCEEEEEeCCCcEEEeCCCCeEEEEec---c
Q psy710 131 INWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPI-QKLLAIGTKTGSLRLLGRPGVDAHVRH---E 206 (591)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~---~ 206 (591)
........ ...+.-..+..++++|+ ++++++...++.|++|+..+++..... .
T Consensus 182 ~~~g~~~~-----------------------~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~ 238 (329)
T 3fvz_A 182 GEESSGSS-----------------------PRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHAS 238 (329)
T ss_dssp CEECCSSS-----------------------CCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTT
T ss_pred ccCCCCCC-----------------------CCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccc
Confidence 21110000 00011234689999998 777777778999999999855554433 2
Q ss_pred CCCcEEEEEEEcCCceEEE-------EeCCCcEEEEEccCCCcceEEeee---eccccEEEEEecCCCCEEEEEeCCccE
Q psy710 207 TDAAVIQMQFLTNEGALIT-------ATADDSLHLWNFRQKRPEIVHSLK---FQRERITYIHLPLQSKWLYVGTEKGNI 276 (591)
Q Consensus 207 ~~~~v~~~~~~~~~~~l~~-------~~~d~~i~~wd~~~~~~~~~~~~~---~~~~~v~~~~~sp~~~~l~~~~~dg~i 276 (591)
....+..++|+| +..+.+ ...+..|++||..++ +.+..+. .+...+..++++|+|.++++...++.|
T Consensus 239 ~~~~~~~~~~~p-g~~~~~~g~~~v~~~~~~~v~~~~~~~g--~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I 315 (329)
T 3fvz_A 239 FGRNVFAISYIP-GFLFAVNGKPYFGDQEPVQGFVMNFSSG--EIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTV 315 (329)
T ss_dssp TTTCEEEEEEET-TEEEEEECCCCTTCSCCCCEEEEETTTC--CEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCE
T ss_pred cCCCcceeeecC-CEEEEeCCCEEeccCCCcEEEEEEcCCC--eEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEE
Confidence 345788999999 433333 234458999999887 6676663 455678999999999888888889999
Q ss_pred EEEEccC
Q psy710 277 HVVNIES 283 (591)
Q Consensus 277 ~i~d~~~ 283 (591)
++|++..
T Consensus 316 ~~~~~~~ 322 (329)
T 3fvz_A 316 WKFTLTE 322 (329)
T ss_dssp EEEEEEE
T ss_pred EEEeCCc
Confidence 9999875
No 181
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.76 E-value=4.7e-16 Score=148.57 Aligned_cols=239 Identities=7% Similarity=0.049 Sum_probs=174.5
Q ss_pred cceEEEEeeCCceEEEEEeCCC------------------------cEEEEEeeeeeeeceecccccccccCCCCCCCce
Q psy710 93 ERITYIHLPLQSKWLYVGTEKG------------------------NIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPI 148 (591)
Q Consensus 93 ~~v~~~~~~~~~~~l~~~~~d~------------------------~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (591)
+.+.+++++|+|+++++...++ .|.+||..++++.....
T Consensus 24 ~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~----------------- 86 (329)
T 3fvz_A 24 GQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSG----------------- 86 (329)
T ss_dssp SCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEEC-----------------
T ss_pred CCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccC-----------------
Confidence 5689999999999888877763 56777766555433221
Q ss_pred eccCCCCcCcceeeeccCCCCceEEEECCCCCEEEEEeCCCcEEEeCCCCe--EEEEe---------ccCCCcEEEEEEE
Q psy710 149 IHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGV--DAHVR---------HETDAAVIQMQFL 217 (591)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~--~~~~~---------~~~~~~v~~~~~~ 217 (591)
.++-..+..++++|+++++++...++.|++|+..+. ..... ..+......++++
T Consensus 87 ---------------~~~~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~ 151 (329)
T 3fvz_A 87 ---------------KNLFYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVE 151 (329)
T ss_dssp ---------------TTTCSSEEEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEEC
T ss_pred ---------------CCccCCceEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEe
Confidence 233346789999999998888888999999998765 22222 1223368899999
Q ss_pred c-CCceEEEEe-CCCcEEEEEccCCCcceEEeeeec----------cccEEEEEecCC-CCEEEEEeCCccEEEEEccCc
Q psy710 218 T-NEGALITAT-ADDSLHLWNFRQKRPEIVHSLKFQ----------RERITYIHLPLQ-SKWLYVGTEKGNIHVVNIESF 284 (591)
Q Consensus 218 ~-~~~~l~~~~-~d~~i~~wd~~~~~~~~~~~~~~~----------~~~v~~~~~sp~-~~~l~~~~~dg~i~i~d~~~~ 284 (591)
| ++..+++.+ .++.|++|+.. + ..+..+... -.....++++|+ ++++++...++.|++|+..++
T Consensus 152 ~~~g~lyv~d~~~~~~I~~~~~~-g--~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G 228 (329)
T 3fvz_A 152 PSTGAVFVSDGYCNSRIVQFSPS-G--KFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTK 228 (329)
T ss_dssp TTTCCEEEEECSSCCEEEEECTT-S--CEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTC
T ss_pred CCCCeEEEEeCCCCCeEEEEcCC-C--CEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCC
Confidence 9 777777775 68999999943 3 455555322 133889999998 777777778889999999866
Q ss_pred cccceeeehhhhccccccCCCCCeEEEecCCCCCCeEEEE-------EcCCEEEEEecccceEEEEec----cCCCeeEE
Q psy710 285 TLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKLLLA-------YETGLVVHWDLKLKRAEFRWQ----CSEPIKSV 353 (591)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~-------~~dg~i~iwd~~~~~~~~~~~----~~~~v~~~ 353 (591)
+... ......+...+..++++| +..+++. ..+..|++||..+++++..+. +...+..+
T Consensus 229 ~~~~---------~~~~~~~~~~~~~~~~~p--g~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~i 297 (329)
T 3fvz_A 229 EFVR---------EIKHASFGRNVFAISYIP--GFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDI 297 (329)
T ss_dssp CEEE---------EECCTTTTTCEEEEEEET--TEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEE
T ss_pred cEEE---------EEeccccCCCcceeeecC--CEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEE
Confidence 6532 112234566788899988 2222222 234589999999999998873 56678999
Q ss_pred EEeecCCEEEEEecCCcEEEEecC
Q psy710 354 CWHYEGKQFLCSHTDGTISTWAVR 377 (591)
Q Consensus 354 ~~sp~g~~l~s~~~dg~i~vwd~~ 377 (591)
+++|+|.++++...++.|++|++.
T Consensus 298 a~~~dG~lyvad~~~~~I~~~~~~ 321 (329)
T 3fvz_A 298 VASEDGTVYIGDAHTNTVWKFTLT 321 (329)
T ss_dssp EECTTSEEEEEESSSCCEEEEEEE
T ss_pred EECCCCCEEEEECCCCEEEEEeCC
Confidence 999999888888899999999997
No 182
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.74 E-value=2.3e-15 Score=143.48 Aligned_cols=280 Identities=11% Similarity=0.101 Sum_probs=192.1
Q ss_pred CCCcEEEEcCCCceeE-eec------cCCcceEEEEEeecCCEEEEecCCCeEEEEeecccCceeeeEEEeeccceEEEE
Q psy710 27 KTGSLRLLGRPGVDAH-VRH------ETDAAVIQMQFLTNEGALITATADDSLHLWNFRQKRPEIVHSLKFQRERITYIH 99 (591)
Q Consensus 27 ~dg~i~lw~~~~~~~~-~~~------~h~~~v~~l~~sp~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~ 99 (591)
.++.|.++|.+..++. .+. ........+.+. +++..++...++.|.+||..+++ .+..+. .......++
T Consensus 15 ~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~--~~~~i~-~~~~p~~i~ 90 (328)
T 3dsm_A 15 SNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFK--EVGRIT-GFTSPRYIH 90 (328)
T ss_dssp CCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCC--EEEEEE-CCSSEEEEE
T ss_pred CCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEE-CCEEEEEEcCCCEEEEEECcccE--EEEEcC-CCCCCcEEE
Confidence 3789999998744433 221 122446777774 34555666668999999999885 556664 346688999
Q ss_pred eeCCceEEEEEeCCCcEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCCC
Q psy710 100 LPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQ 179 (591)
Q Consensus 100 ~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 179 (591)
++++++..++...++.|.+||..+++....+..... .+....+..+++ ++
T Consensus 91 ~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~----------------------------~~~~~~p~~i~~--~~ 140 (328)
T 3dsm_A 91 FLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDM----------------------------DMESGSTEQMVQ--YG 140 (328)
T ss_dssp EEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTC----------------------------CTTTCBCCCEEE--ET
T ss_pred EeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCc----------------------------cccCCCcceEEE--EC
Confidence 999985544444789999999998876655441110 011123456777 34
Q ss_pred CEEEEEe--CCCcEEEeCCCCeEEEEeccCCCcEEEEEEEcCCceEEEEeCC----------CcEEEEEccCCCcceEEe
Q psy710 180 KLLAIGT--KTGSLRLLGRPGVDAHVRHETDAAVIQMQFLTNEGALITATAD----------DSLHLWNFRQKRPEIVHS 247 (591)
Q Consensus 180 ~~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----------~~i~~wd~~~~~~~~~~~ 247 (591)
+.+.++. .++.|.++|..+.+.............+.++|+|++++++..+ +.|.++|..+. +....
T Consensus 141 ~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~--~v~~~ 218 (328)
T 3dsm_A 141 KYVYVNCWSYQNRILKIDTETDKVVDELTIGIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETF--TVEKQ 218 (328)
T ss_dssp TEEEEEECTTCCEEEEEETTTTEEEEEEECSSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTT--EEEEE
T ss_pred CEEEEEcCCCCCEEEEEECCCCeEEEEEEcCCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCC--eEEEE
Confidence 4455554 4889999999988776554444466789999999877766554 78999999887 55555
Q ss_pred eeec-cccEEEEEecCCCCEEEEEeCCccEEEEEccCccccceeeehhhhccccccCCCCCeEEEecCCCCCCeEEEE--
Q psy710 248 LKFQ-RERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKLLLA-- 324 (591)
Q Consensus 248 ~~~~-~~~v~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~-- 324 (591)
+... ......++++|+++.++++.. .|.+||..+++... .............++++| ++..|+++
T Consensus 219 ~~~~~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~~---------~~~~~~~~~~p~gi~vdp-~~g~lyva~~ 286 (328)
T 3dsm_A 219 FKFKLGDWPSEVQLNGTRDTLYWINN--DIWRMPVEADRVPV---------RPFLEFRDTKYYGLTVNP-NNGEVYVADA 286 (328)
T ss_dssp EECCTTCCCEEEEECTTSCEEEEESS--SEEEEETTCSSCCS---------SCSBCCCSSCEEEEEECT-TTCCEEEEEC
T ss_pred EecCCCCCceeEEEecCCCEEEEEcc--EEEEEECCCCceee---------eeeecCCCCceEEEEEcC-CCCeEEEEcc
Confidence 5432 236889999999999998765 89999998876521 001122246788999999 65555554
Q ss_pred ---EcCCEEEEEecccceEEEEeccCCCeeEEEE
Q psy710 325 ---YETGLVVHWDLKLKRAEFRWQCSEPIKSVCW 355 (591)
Q Consensus 325 ---~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~ 355 (591)
..++.|.+||.. ++.+..+.-......++|
T Consensus 287 ~~y~~~~~V~v~d~~-g~~~~~i~~G~~P~~~~~ 319 (328)
T 3dsm_A 287 IDYQQQGIVYRYSPQ-GKLIDEFYVGIIPGAFCW 319 (328)
T ss_dssp TTSSSEEEEEEECTT-CCEEEEEEEEESEEEEEE
T ss_pred cccccCCEEEEECCC-CCEEEEEEeccCcceEEE
Confidence 468899999998 888877765555566665
No 183
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.74 E-value=8.8e-16 Score=162.96 Aligned_cols=277 Identities=9% Similarity=0.058 Sum_probs=182.7
Q ss_pred CCCcEEEEEeCCC-----cEEEEcCCCceeEee-------ccCCcceEEEEEeecCCEEEEecCCC-----eEEEEeecc
Q psy710 17 PIQKLLAIGTKTG-----SLRLLGRPGVDAHVR-------HETDAAVIQMQFLTNEGALITATADD-----SLHLWNFRQ 79 (591)
Q Consensus 17 pdg~~la~g~~dg-----~i~lw~~~~~~~~~~-------~~h~~~v~~l~~sp~~~~l~s~~~d~-----~i~vw~~~~ 79 (591)
|||++++....++ .+.+.+..+.....+ .+|...+..++|||||++|+.++.++ .|++||+.+
T Consensus 81 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~t 160 (710)
T 2xdw_A 81 KKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDG 160 (710)
T ss_dssp EETTEEEEEEECSSCSSCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTT
T ss_pred EECCEEEEEEEcCCceEEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCC
Confidence 8999888654322 344444433322222 23445789999999999998765433 899999998
Q ss_pred cCceeeeEEEeeccceEEEEeeCCceEEEEEeCCCc----------------EEEEEeeeeeeeceecccccccccCCCC
Q psy710 80 KRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEKGN----------------IHVVNIESFTLSGYIINWNKAIDVCMKT 143 (591)
Q Consensus 80 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~----------------i~vwd~~~~~~~~~~~~~~~~~~~~~~~ 143 (591)
++ ..... .....+..++|+||++.|+.++.++. |++|++.+++....+.
T Consensus 161 g~--~~~~~-~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v------------ 225 (710)
T 2xdw_A 161 AK--ELPDV-LERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILC------------ 225 (710)
T ss_dssp TE--EEEEE-EEEECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEE------------
T ss_pred CC--CCccc-ccCcccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEE------------
Confidence 85 23221 12223677999999999999887765 8899887654211110
Q ss_pred CCCceeccCCCCcCcceeee-ccCCCCceEEEECCCCCEEEEEeC-----CCcEEEeCCCC------e--EEEEeccCCC
Q psy710 144 HPGPIIHLSDNPLDPSKTFR-HGFPYQPTAIAFDPIQKLLAIGTK-----TGSLRLLGRPG------V--DAHVRHETDA 209 (591)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~-----dg~i~i~d~~~------~--~~~~~~~~~~ 209 (591)
+. ..+...+..++|+|||++|+..+. +..|++||+.+ . .......+..
T Consensus 226 ------------------~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~ 287 (710)
T 2xdw_A 226 ------------------AEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFE 287 (710)
T ss_dssp ------------------ECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSS
T ss_pred ------------------eccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCC
Confidence 00 112344678999999999888765 56899999865 3 2333333333
Q ss_pred cEEEEEEEcCCceEEEEeCC----CcEEEEEccCCCcceEEeeeeccc--cEEEEEecCCCCEEEEEeCCcc--EEEEEc
Q psy710 210 AVIQMQFLTNEGALITATAD----DSLHLWNFRQKRPEIVHSLKFQRE--RITYIHLPLQSKWLYVGTEKGN--IHVVNI 281 (591)
Q Consensus 210 ~v~~~~~~~~~~~l~~~~~d----~~i~~wd~~~~~~~~~~~~~~~~~--~v~~~~~sp~~~~l~~~~~dg~--i~i~d~ 281 (591)
.+.. .|+|+|+.|+..+.. ..|.+||+.++.......+..+.. .+..++|++++.++++...++. |++|++
T Consensus 288 ~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~ 366 (710)
T 2xdw_A 288 GEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDL 366 (710)
T ss_dssp SCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEET
T ss_pred cEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEEC
Confidence 4443 588899888776553 359999998763222344444433 6888899888888888888884 566676
Q ss_pred cCccccceeeehhhhccccccCCCCCeEEEecCCCCCCeEEEEEc----CCEEEEEecccce
Q psy710 282 ESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKLLLAYE----TGLVVHWDLKLKR 339 (591)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~----dg~i~iwd~~~~~ 339 (591)
.+++.. ..+..+.+.+..+.++| +++.++.... .+.|++||+.+++
T Consensus 367 ~~g~~~-----------~~l~~~~~~v~~~~~s~-d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 367 ATGALL-----------KIFPLEVGSVVGYSGQK-KDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp TTCCEE-----------EEECCCSSEEEEEECCT-TCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred CCCCEE-----------EecCCCCceEEEEecCC-CCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 555431 13344577789999999 8876665432 5799999998877
No 184
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.73 E-value=1.9e-14 Score=135.60 Aligned_cols=281 Identities=7% Similarity=-0.018 Sum_probs=193.6
Q ss_pred CCCCCcEEEeCCCCcEEEEEeCCCcEEEEcCCCceeEee--ccCCcceEEEEEeecCCEEEEecCCCeEEEEeecccCce
Q psy710 6 FPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGVDAHVR--HETDAAVIQMQFLTNEGALITATADDSLHLWNFRQKRPE 83 (591)
Q Consensus 6 h~~~v~~~~~spdg~~la~g~~dg~i~lw~~~~~~~~~~--~~h~~~v~~l~~sp~~~~l~s~~~d~~i~vw~~~~~~~~ 83 (591)
+...+.+++++++|+++++...++.|.+||.. .....+ ..+...+.++++.++++.+++...++.|..|+.+ ++ .
T Consensus 13 ~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~-~ 89 (299)
T 2z2n_A 13 QDTGPYGITVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK-GI-I 89 (299)
T ss_dssp SSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SC-E
T ss_pred cCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC-Cc-E
Confidence 44678999999999987776667899999988 334333 2345789999999999888887778899999876 32 1
Q ss_pred eeeEEEeeccceEEEEeeCCceEEEEEeCCCcEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCcceeee
Q psy710 84 IVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFR 163 (591)
Q Consensus 84 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (591)
....+......+..+++.++++.+++...++.|..||. +++......
T Consensus 90 ~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~-------------------------------- 136 (299)
T 2z2n_A 90 KEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYEL-------------------------------- 136 (299)
T ss_dssp EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEEC--------------------------------
T ss_pred EEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecC--------------------------------
Confidence 11112223456889999999988777767788999987 443321110
Q ss_pred ccCCCCceEEEECCCCCEEEEEeCCCcEEEeCCCCeEEEEe--ccCCCcEEEEEEEcCCceEEEEeCCCcEEEEEccCCC
Q psy710 164 HGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGVDAHVR--HETDAAVIQMQFLTNEGALITATADDSLHLWNFRQKR 241 (591)
Q Consensus 164 ~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~ 241 (591)
......+..+++++++++.++...++.|..||. +.+.... ......+..+++.++++.+++...++.|.+||. ++.
T Consensus 137 ~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~ 214 (299)
T 2z2n_A 137 PNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGE 214 (299)
T ss_dssp SSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCC
T ss_pred CCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCc
Confidence 012245689999999987777767789999998 4444332 223456889999999987776666788999998 552
Q ss_pred cceEEeeeeccccEEEEEecCCCCEEEEEeCCccEEEEEccCccccceeeehhhhccccccCCCCCeEEEecCCCCCCeE
Q psy710 242 PEIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKL 321 (591)
Q Consensus 242 ~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l 321 (591)
. ....+..+...+.+++++++|++.++...++.|..||.. ++.. ......+...+.++++ + ++++.
T Consensus 215 ~-~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~-g~~~----------~~~~~~~~~~~~~i~~-~-~g~l~ 280 (299)
T 2z2n_A 215 I-TEFKIPTPNARPHAITAGAGIDLWFTEWGANKIGRLTSN-NIIE----------EYPIQIKSAEPHGICF-D-GETIW 280 (299)
T ss_dssp E-EEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEEETT-TEEE----------EEECSSSSCCEEEEEE-C-SSCEE
T ss_pred E-EEEECCCCCCCceeEEECCCCCEEEeccCCceEEEECCC-CceE----------EEeCCCCCCccceEEe-c-CCCEE
Confidence 1 112233344678999999999866655577899999983 4332 1122344567899999 8 87766
Q ss_pred EEEEcCCEEEEEecccce
Q psy710 322 LLAYETGLVVHWDLKLKR 339 (591)
Q Consensus 322 ~~~~~dg~i~iwd~~~~~ 339 (591)
++.+ .+.+..++..+++
T Consensus 281 v~~~-~~~l~~~~~~~~~ 297 (299)
T 2z2n_A 281 FAME-CDKIGKLTLIKDN 297 (299)
T ss_dssp EEET-TTEEEEEEEC---
T ss_pred EEec-CCcEEEEEcCccc
Confidence 6554 5667777776654
No 185
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.73 E-value=1.7e-15 Score=142.60 Aligned_cols=253 Identities=9% Similarity=0.055 Sum_probs=177.8
Q ss_pred CceeEeeccCCcceEEEEEeecCC-EEEEecCCCeEEEEeecccCceeeeEEEeeccceEEEEeeCCceEEEEEeCCCcE
Q psy710 38 GVDAHVRHETDAAVIQMQFLTNEG-ALITATADDSLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNI 116 (591)
Q Consensus 38 ~~~~~~~~~h~~~v~~l~~sp~~~-~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i 116 (591)
+..+..+..+.....+++|+|+++ +++++..++.|..|+..++ ...+..+...+.+++++++++++++...++.|
T Consensus 17 ~~~~~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~----~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i 92 (296)
T 3e5z_A 17 GAEARRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ----LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRL 92 (296)
T ss_dssp TCCCEEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC----EEEEESSCSSEEEEEECTTCCEEEEETTTTEE
T ss_pred CCcEEEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC----eEEEECCCCCcceeeECCCCcEEEEecCCCeE
Confidence 445566666777889999999998 6778888999999998865 34455566789999999999987777667899
Q ss_pred EEEEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCCCCEEEE----Ee------
Q psy710 117 HVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAI----GT------ 186 (591)
Q Consensus 117 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~----~~------ 186 (591)
.+||..+++.......... .....+..++++|+|+++++ |+
T Consensus 93 ~~~d~~~g~~~~~~~~~~~-----------------------------~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~ 143 (296)
T 3e5z_A 93 ERQREPGGEWESIADSFEG-----------------------------KKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEG 143 (296)
T ss_dssp EEECSTTCCEEEEECEETT-----------------------------EECCCCCCEEECTTSCEEEEECSHHHHCGGGS
T ss_pred EEEcCCCCcEEEEeeccCC-----------------------------CCCCCCCCEEECCCCCEEEECCcccccccccc
Confidence 9999977665433221000 01234678999999998876 33
Q ss_pred -------CCCcEEEeCCCCeEEEEeccCCCcEEEEEEEcCCceEEEEeCCCcEEEEEcc-CCCc-ceEEeeeeccccEEE
Q psy710 187 -------KTGSLRLLGRPGVDAHVRHETDAAVIQMQFLTNEGALITATADDSLHLWNFR-QKRP-EIVHSLKFQRERITY 257 (591)
Q Consensus 187 -------~dg~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~-~~~~-~~~~~~~~~~~~v~~ 257 (591)
..+.|..++.. ++.............++|+|+++.+++.+.++.|.+|++. .+.. .....+..+...+..
T Consensus 144 ~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~ 222 (296)
T 3e5z_A 144 YGGEMELPGRWVFRLAPD-GTLSAPIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDG 222 (296)
T ss_dssp SCCCCCSSSCEEEEECTT-SCEEEEECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCS
T ss_pred ccccccCCCcEEEEECCC-CCEEEeecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCe
Confidence 13578888876 4444334444577899999999988777778999999997 3321 112233334455678
Q ss_pred EEecCCCCEEEEEeCCccEEEEEccCccccceeeehhhhccccccCCCCCeEEEec-CCCCCCeEEEEEcCCEEEEEecc
Q psy710 258 IHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSD-NPLDPSKLLLAYETGLVVHWDLK 336 (591)
Q Consensus 258 ~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-sp~~~~~l~~~~~dg~i~iwd~~ 336 (591)
++++++|++.++. ++.|.+|+... +.. ..+..+.. +.+++| +| +++.|++++.++ +.-++..
T Consensus 223 i~~d~~G~l~v~~--~~~v~~~~~~g-~~~-----------~~~~~~~~-~~~~~f~~~-d~~~L~v~t~~~-l~~~~~~ 285 (296)
T 3e5z_A 223 LRVDAGGLIWASA--GDGVHVLTPDG-DEL-----------GRVLTPQT-TSNLCFGGP-EGRTLYMTVSTE-FWSIETN 285 (296)
T ss_dssp EEEBTTSCEEEEE--TTEEEEECTTS-CEE-----------EEEECSSC-CCEEEEEST-TSCEEEEEETTE-EEEEECS
T ss_pred EEECCCCCEEEEc--CCeEEEECCCC-CEE-----------EEEECCCC-ceeEEEECC-CCCEEEEEcCCe-EEEEEcc
Confidence 9999999865554 78899999873 331 13344445 888999 68 888899888764 5455666
Q ss_pred cceEE
Q psy710 337 LKRAE 341 (591)
Q Consensus 337 ~~~~~ 341 (591)
++++.
T Consensus 286 ~~~~~ 290 (296)
T 3e5z_A 286 VRGLE 290 (296)
T ss_dssp CCBCC
T ss_pred ccccc
Confidence 65543
No 186
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.73 E-value=1.9e-16 Score=167.47 Aligned_cols=285 Identities=8% Similarity=-0.032 Sum_probs=183.9
Q ss_pred eCCCCcEEEEEeCCC---cEEEEc--CCCceeEeec-------cCCcceEEEEEeecCCEEE-----EecCCCeEEEEee
Q psy710 15 FDPIQKLLAIGTKTG---SLRLLG--RPGVDAHVRH-------ETDAAVIQMQFLTNEGALI-----TATADDSLHLWNF 77 (591)
Q Consensus 15 ~spdg~~la~g~~dg---~i~lw~--~~~~~~~~~~-------~h~~~v~~l~~sp~~~~l~-----s~~~d~~i~vw~~ 77 (591)
.+|+|++++....++ .-.||. ..+.....+. +|...+..++|||||++|+ .|+.+.+|++||+
T Consensus 75 p~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl 154 (695)
T 2bkl_A 75 PSRRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDV 154 (695)
T ss_dssp CEEETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEET
T ss_pred CEEECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEEC
Confidence 348999888776543 344554 4333333332 4556799999999999998 4445678999999
Q ss_pred cccCceeeeEEEeeccceEEEEeeCCceEEEEEeCCCc-------------EEEEEeeeeeeeceecccccccccCCCCC
Q psy710 78 RQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEKGN-------------IHVVNIESFTLSGYIINWNKAIDVCMKTH 144 (591)
Q Consensus 78 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~-------------i~vwd~~~~~~~~~~~~~~~~~~~~~~~~ 144 (591)
.+++......+.. .....++|+|||+.|+.++.|.. |++|++.+++....+..
T Consensus 155 ~tg~~~~~~~~~~--~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~------------ 220 (695)
T 2bkl_A 155 DSGEWSKVDVIEG--GKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVH------------ 220 (695)
T ss_dssp TTCCBCSSCCBSC--CTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEE------------
T ss_pred CCCCCcCCcccCc--ccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEE------------
Confidence 9886210111111 11267899999999999988765 99999887542111100
Q ss_pred CCceeccCCCCcCcceeeeccCCCCceEEEECCCCCEEEEEeCCC----cEEEeCCCCeEEEEeccCCCcEEEEEEEcCC
Q psy710 145 PGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTKTG----SLRLLGRPGVDAHVRHETDAAVIQMQFLTNE 220 (591)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg----~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~ 220 (591)
-...+...+..+.|+|||++|+..+.++ .|++++..+.+......+...+....+ +++
T Consensus 221 -----------------~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~-~~g 282 (695)
T 2bkl_A 221 -----------------ERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVGAKYEVHA-WKD 282 (695)
T ss_dssp -----------------CCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSSCCEEEEE-ETT
T ss_pred -----------------ecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCCceEEEEe-cCC
Confidence 0012334578999999999998877666 788888765544444334345566666 577
Q ss_pred ceEEEEeC----CCcEEEEEccCCCcceEEeee-ec-cccEEEEEecCCCCEEEEEeCCccEEEEEcc-Cccccceeeeh
Q psy710 221 GALITATA----DDSLHLWNFRQKRPEIVHSLK-FQ-RERITYIHLPLQSKWLYVGTEKGNIHVVNIE-SFTLSGYIINW 293 (591)
Q Consensus 221 ~~l~~~~~----d~~i~~wd~~~~~~~~~~~~~-~~-~~~v~~~~~sp~~~~l~~~~~dg~i~i~d~~-~~~~~~~~~~~ 293 (591)
+ ++..+. ++.|.+||+.++.......+. .+ ...+..++++ ++.++++...|+..++|.+. +++..
T Consensus 283 ~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~------ 354 (695)
T 2bkl_A 283 R-FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVATLKGKPV------ 354 (695)
T ss_dssp E-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEETTCCEE------
T ss_pred c-EEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCee------
Confidence 7 554443 578999999776321122332 22 3467888887 77888888999988887665 22221
Q ss_pred hhhccccccCC-CCCeEEEecCCCCCCeEEEEEc----CCEEEEEecccceEEEEec
Q psy710 294 NKAIDVCMKTH-PGPIIHLSDNPLDPSKLLLAYE----TGLVVHWDLKLKRAEFRWQ 345 (591)
Q Consensus 294 ~~~~~~~~~~~-~~~v~~~~~sp~~~~~l~~~~~----dg~i~iwd~~~~~~~~~~~ 345 (591)
..+..+ .+.+..++++| +++.++.... .++|++||+.+++......
T Consensus 355 -----~~l~~~~~~~v~~~~~s~-d~~~l~~~~ss~~~P~~v~~~d~~~g~~~~l~~ 405 (695)
T 2bkl_A 355 -----RTVQLPGVGAASNLMGLE-DLDDAYYVFTSFTTPRQIYKTSVSTGKSELWAK 405 (695)
T ss_dssp -----EECCCSSSSEECCCBSCT-TCSEEEEEEEETTEEEEEEEEETTTCCEEEEEE
T ss_pred -----EEecCCCCeEEEEeecCC-CCCEEEEEEcCCCCCCEEEEEECCCCcEEEEec
Confidence 123333 56678889999 8887775332 4789999999887544433
No 187
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.72 E-value=1.2e-15 Score=161.90 Aligned_cols=245 Identities=7% Similarity=0.023 Sum_probs=169.2
Q ss_pred CCCCCCcEEEeCCCCcEEEEEeCCC-----cEEEEcCCCceeEeeccCCcceEEEEEeecCCEEEEecCCCe--------
Q psy710 5 GFPYQPTAIAFDPIQKLLAIGTKTG-----SLRLLGRPGVDAHVRHETDAAVIQMQFLTNEGALITATADDS-------- 71 (591)
Q Consensus 5 gh~~~v~~~~~spdg~~la~g~~dg-----~i~lw~~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~~~d~~-------- 71 (591)
+|...+..++|||||++||.+..++ .|++||+.+.+..........+..++|+|||+.|+.++.++.
T Consensus 122 ~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~ 201 (710)
T 2xdw_A 122 DGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTE 201 (710)
T ss_dssp TSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEECSCCEEECTTSSEEEEEECCCCSSCCSSSC
T ss_pred CCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccCcccceEEEEeCCCEEEEEEECCccccccccc
Confidence 4555678999999999999776533 899999985554433222234678999999999998887765
Q ss_pred --------EEEEeecccCceeeeEEE--eeccceEEEEeeCCceEEEEEeC-----CCcEEEEEeee------ee-eece
Q psy710 72 --------LHLWNFRQKRPEIVHSLK--FQRERITYIHLPLQSKWLYVGTE-----KGNIHVVNIES------FT-LSGY 129 (591)
Q Consensus 72 --------i~vw~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~-----d~~i~vwd~~~------~~-~~~~ 129 (591)
|.+|++.+++.+....+. .+...+..+.|+|||++|+..+. +..|++||+.+ +. ....
T Consensus 202 ~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~ 281 (710)
T 2xdw_A 202 TSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVK 281 (710)
T ss_dssp CCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEE
T ss_pred cccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEE
Confidence 999999876422122222 24455788999999999988765 56899999876 32 1111
Q ss_pred ecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCCCCEEEEEeCC----CcEEEeCCCCeE-----
Q psy710 130 IINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTKT----GSLRLLGRPGVD----- 200 (591)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----g~i~i~d~~~~~----- 200 (591)
+. .+...+.. .|+|+|+.|+..+.. +.|.+|++.+..
T Consensus 282 l~---------------------------------~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~ 327 (710)
T 2xdw_A 282 LI---------------------------------DNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWK 327 (710)
T ss_dssp EE---------------------------------CSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCE
T ss_pred ee---------------------------------CCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccce
Confidence 11 11222333 578899888776653 359999987652
Q ss_pred EEEeccCCCcEEEEEEEcCCceEEEEeCCCc--EEEEEccCCCcceEEeeeeccccEEEEEecCCCCEEEEEe----CCc
Q psy710 201 AHVRHETDAAVIQMQFLTNEGALITATADDS--LHLWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGT----EKG 274 (591)
Q Consensus 201 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~--i~~wd~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~----~dg 274 (591)
.+..+.....+..+.|++++.++++...++. |.+|++.++ +.+..+..+.+.+..+.++|+++.++... ..+
T Consensus 328 ~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g--~~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~ 405 (710)
T 2xdw_A 328 VLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATG--ALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPG 405 (710)
T ss_dssp EEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTC--CEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCC
T ss_pred eccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCC--CEEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCC
Confidence 2222222236888999977778888888885 555666555 56677777777899999999997666442 246
Q ss_pred cEEEEEccCcc
Q psy710 275 NIHVVNIESFT 285 (591)
Q Consensus 275 ~i~i~d~~~~~ 285 (591)
+++.||+.+++
T Consensus 406 ~i~~~d~~tg~ 416 (710)
T 2xdw_A 406 IIYHCDLTKEE 416 (710)
T ss_dssp EEEEEETTSSS
T ss_pred EEEEEECCCCc
Confidence 89999998876
No 188
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.72 E-value=3.3e-14 Score=144.14 Aligned_cols=300 Identities=12% Similarity=0.064 Sum_probs=203.1
Q ss_pred CCcEEEeCCCCcEEEEEeCCCcEEEEcC---CCceeEeeccCCcceEEEEEe----ecCCEEEEecC-CCeEEEEeeccc
Q psy710 9 QPTAIAFDPIQKLLAIGTKTGSLRLLGR---PGVDAHVRHETDAAVIQMQFL----TNEGALITATA-DDSLHLWNFRQK 80 (591)
Q Consensus 9 ~v~~~~~spdg~~la~g~~dg~i~lw~~---~~~~~~~~~~h~~~v~~l~~s----p~~~~l~s~~~-d~~i~vw~~~~~ 80 (591)
.+..++|||||++|++++.++.|.+||+ ....+..+.... ....++|+ |||++++++.. ++++.++|..+.
T Consensus 198 ~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~-~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~ 276 (567)
T 1qks_A 198 AVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGS-EARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETL 276 (567)
T ss_dssp CEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCS-EEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTC
T ss_pred CccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCC-CCceeEEccccCCCCCEEEEEEccCCeEEEEECCCC
Confidence 4568999999999999999999999998 344555555433 46799999 69999887765 699999998877
Q ss_pred CceeeeEEEe----------ecc-ceEEEEeeCCceEEEE-EeCCCcEEEEEeeeeeeeceecccccccccCCCCCCCce
Q psy710 81 RPEIVHSLKF----------QRE-RITYIHLPLQSKWLYV-GTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPI 148 (591)
Q Consensus 81 ~~~~~~~~~~----------~~~-~v~~~~~~~~~~~l~~-~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (591)
+ .+..+.. |.. .+..+..++++..++. ...+|.|.++|..+.+......
T Consensus 277 ~--~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~----------------- 337 (567)
T 1qks_A 277 E--PKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTE----------------- 337 (567)
T ss_dssp C--EEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEE-----------------
T ss_pred c--EEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeee-----------------
Confidence 5 4444432 222 5778888887655444 4457899999876532111100
Q ss_pred eccCCCCcCcceeeeccCCCCceEEEECCCCCEEEEEe-CCCcEEEeCCCCeEEEEeccC----CCcEEEEE-EEcCCce
Q psy710 149 IHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGT-KTGSLRLLGRPGVDAHVRHET----DAAVIQMQ-FLTNEGA 222 (591)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~----~~~v~~~~-~~~~~~~ 222 (591)
.........+.|+|++++++++. .++.|.++|..+.+......- ..+-.... ++|++..
T Consensus 338 ---------------i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~~~p~~g~ 402 (567)
T 1qks_A 338 ---------------ISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGP 402 (567)
T ss_dssp ---------------EECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEETTTEE
T ss_pred ---------------eeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceeeECCCCCc
Confidence 01123356889999999887766 578999999998876533221 11111222 5787555
Q ss_pred EE-EEe-CCCcEEEEEccCCC-----cceEEeeeeccccEEEEEecCCCCEEEEEeC-------CccEEEEEccCccc--
Q psy710 223 LI-TAT-ADDSLHLWNFRQKR-----PEIVHSLKFQRERITYIHLPLQSKWLYVGTE-------KGNIHVVNIESFTL-- 286 (591)
Q Consensus 223 l~-~~~-~d~~i~~wd~~~~~-----~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~-------dg~i~i~d~~~~~~-- 286 (591)
+. +.. .++.|.++|..+.. .+.++.+......-..+..+|+++++++... .+.|.++|+.+.+.
T Consensus 403 v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g 482 (567)
T 1qks_A 403 VWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDG 482 (567)
T ss_dssp EEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSS
T ss_pred EEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecCCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcccccc
Confidence 54 443 46899999998732 3567777765333345778999999998773 35999999988722
Q ss_pred --cce-eeehhhhccccccCCCCCeEEEecCCCCCCeEEEEE-----cCCEEEEEecccceEEEEecc
Q psy710 287 --SGY-IINWNKAIDVCMKTHPGPIIHLSDNPLDPSKLLLAY-----ETGLVVHWDLKLKRAEFRWQC 346 (591)
Q Consensus 287 --~~~-~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~-----~dg~i~iwd~~~~~~~~~~~~ 346 (591)
..+ .+...+ -..+......+..+.|+| +|+.+..+. .++.|.++|..+.++...+..
T Consensus 483 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~G~~~~~s~~~~~~~~~~i~v~D~~t~~~~~~i~~ 547 (567)
T 1qks_A 483 SDPEFKTLPIAE--WAGITEGQPRVVQGEFNK-DGTEVWFSVWNGKDQESALVVVDDKTLELKHVIKD 547 (567)
T ss_dssp SCCCEEEECHHH--HHTCCSSCCEEEEEEECT-TSSEEEEEEECCTTSCCEEEEEETTTTEEEEEECC
T ss_pred cCCCcEEecccc--ccccCCCCcceEeeeECC-CCCEEEEEeecCCCCCCcEEEEECCCceEEEEeCC
Confidence 110 110000 001122245789999999 999887763 379999999999999887763
No 189
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.72 E-value=9.8e-14 Score=130.65 Aligned_cols=280 Identities=8% Similarity=0.023 Sum_probs=194.9
Q ss_pred ccCCcceEEEEEeecCCEEEEecCCCeEEEEeecccCceeeeEEEeeccceEEEEeeCCceEEEEEeCCCcEEEEEeeee
Q psy710 45 HETDAAVIQMQFLTNEGALITATADDSLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESF 124 (591)
Q Consensus 45 ~~h~~~v~~l~~sp~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~ 124 (591)
..+...+.++++.++|+.+++...++.|.+||.. ++. .......+...+.++++.++++.+++...++.|..|+.. +
T Consensus 11 ~~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~-~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g 87 (299)
T 2z2n_A 11 TNQDTGPYGITVSDKGKVWITQHKANMISCINLD-GKI-TEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK-G 87 (299)
T ss_dssp CSSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCE-EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-S
T ss_pred CCcCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCe-EEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC-C
Confidence 3445689999999999987777668899999988 531 111222234678999999999887777667889999865 2
Q ss_pred eeeceecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCCCCEEEEEeCCCcEEEeCCCCeEEEEe
Q psy710 125 TLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGVDAHVR 204 (591)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~ 204 (591)
+.. .+.. ......+..++++++++++++...++.|..||.........
T Consensus 88 ~~~-~~~~-------------------------------~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~g~~~~~~ 135 (299)
T 2z2n_A 88 IIK-EYTL-------------------------------PNPDSAPYGITEGPNGDIWFTEMNGNRIGRITDDGKIREYE 135 (299)
T ss_dssp CEE-EEEC-------------------------------SSTTCCEEEEEECTTSCEEEEETTTTEEEEECTTCCEEEEE
T ss_pred cEE-EEeC-------------------------------CCcCCCceeeEECCCCCEEEEecCCceEEEECCCCCEEEec
Confidence 211 1110 01234578999999998877777788999999843322222
Q ss_pred -ccCCCcEEEEEEEcCCceEEEEeCCCcEEEEEccCCCcceEE-eeeeccccEEEEEecCCCCEEEEEeCCccEEEEEcc
Q psy710 205 -HETDAAVIQMQFLTNEGALITATADDSLHLWNFRQKRPEIVH-SLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIE 282 (591)
Q Consensus 205 -~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~-~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~i~d~~ 282 (591)
......+..+++.++++.+++...++.|..||. ++ +... .+......+..+++++++++.++...++.|.+||.
T Consensus 136 ~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g--~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~- 211 (299)
T 2z2n_A 136 LPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SG--DITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT- 211 (299)
T ss_dssp CSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TC--CEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-
T ss_pred CCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CC--cEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-
Confidence 223457899999999987777766788999998 54 2222 23333456889999999997666666789999998
Q ss_pred CccccceeeehhhhccccccCCCCCeEEEecCCCCCCeEEEEEcCCEEEEEecccceEEEE-e-ccCCCeeEEEEeecCC
Q psy710 283 SFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKLLLAYETGLVVHWDLKLKRAEFR-W-QCSEPIKSVCWHYEGK 360 (591)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~iwd~~~~~~~~~-~-~~~~~v~~~~~sp~g~ 360 (591)
+++... .....+...+.++++++ +++..++...++.|..||. .++.... . .+...+.++++ ++|+
T Consensus 212 ~g~~~~----------~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~-~~g~ 278 (299)
T 2z2n_A 212 SGEITE----------FKIPTPNARPHAITAGA-GIDLWFTEWGANKIGRLTS-NNIIEEYPIQIKSAEPHGICF-DGET 278 (299)
T ss_dssp TCCEEE----------EECSSTTCCEEEEEECS-TTCEEEEETTTTEEEEEET-TTEEEEEECSSSSCCEEEEEE-CSSC
T ss_pred CCcEEE----------EECCCCCCCceeEEECC-CCCEEEeccCCceEEEECC-CCceEEEeCCCCCCccceEEe-cCCC
Confidence 554421 12233456789999999 8886665557889999998 4554333 2 24467899999 8888
Q ss_pred EEEEEecCCcEEEEecC
Q psy710 361 QFLCSHTDGTISTWAVR 377 (591)
Q Consensus 361 ~l~s~~~dg~i~vwd~~ 377 (591)
+.++.. .+.+..++..
T Consensus 279 l~v~~~-~~~l~~~~~~ 294 (299)
T 2z2n_A 279 IWFAME-CDKIGKLTLI 294 (299)
T ss_dssp EEEEET-TTEEEEEEEC
T ss_pred EEEEec-CCcEEEEEcC
Confidence 777655 5667777776
No 190
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.70 E-value=4.4e-15 Score=140.80 Aligned_cols=293 Identities=9% Similarity=-0.021 Sum_probs=195.9
Q ss_pred EEEeCCCCcEEEEEeC-----CCcEEEEcCC-CceeEeeccCCcceEEEEEeecCCEEEEec----------CCCeEEEE
Q psy710 12 AIAFDPIQKLLAIGTK-----TGSLRLLGRP-GVDAHVRHETDAAVIQMQFLTNEGALITAT----------ADDSLHLW 75 (591)
Q Consensus 12 ~~~~spdg~~la~g~~-----dg~i~lw~~~-~~~~~~~~~h~~~v~~l~~sp~~~~l~s~~----------~d~~i~vw 75 (591)
.....|+++.+.+... ++.|.+.|.. .+.+..+.....+ . ++++|||++++.+. .++.|.+|
T Consensus 37 ~~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~Vsvi 114 (386)
T 3sjl_D 37 LEAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVF 114 (386)
T ss_dssp CCCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEE
T ss_pred eeccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEE
Confidence 3456789988888765 6789999987 5555666655555 4 99999999888765 36789999
Q ss_pred eecccCceeeeEEEeec-------cceEEEEeeCCceEEEEEeC--CCcEEEEEeeeeeeeceecccccccccCCCCCCC
Q psy710 76 NFRQKRPEIVHSLKFQR-------ERITYIHLPLQSKWLYVGTE--KGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPG 146 (591)
Q Consensus 76 ~~~~~~~~~~~~~~~~~-------~~v~~~~~~~~~~~l~~~~~--d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (591)
|..+.+ .+..+.... .....++|+|||++++++.. ++.|.++|+.+++.+..+...
T Consensus 115 D~~t~~--v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~------------- 179 (386)
T 3sjl_D 115 DPVTLL--PTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVP------------- 179 (386)
T ss_dssp CTTTCC--EEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECC-------------
T ss_pred ECCCCe--EEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECC-------------
Confidence 999885 556554321 23556899999999998874 689999999998887776410
Q ss_pred ceeccCCCCcCcceeeeccCCCCceEEEECCCCCEEEEEeCCCcEEEeCCCC-eEEEEe---c--cCCCcE-EEEEEE-c
Q psy710 147 PIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPG-VDAHVR---H--ETDAAV-IQMQFL-T 218 (591)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~-~~~~~~---~--~~~~~v-~~~~~~-~ 218 (591)
+ ....+....+.+++.+.||.+.+.++.. ++.... . ....++ ....|. +
T Consensus 180 ---------------------g--~~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~ 236 (386)
T 3sjl_D 180 ---------------------D--CYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQK 236 (386)
T ss_dssp ---------------------S--EEEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETT
T ss_pred ---------------------C--cceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcC
Confidence 0 0111211223444555555555555443 221110 0 011122 224665 5
Q ss_pred CCceEEEEeCCCcEEEEEccCCCcceEEeee----------eccccEEEEEecCCCCEEEEEeC----------CccEEE
Q psy710 219 NEGALITATADDSLHLWNFRQKRPEIVHSLK----------FQRERITYIHLPLQSKWLYVGTE----------KGNIHV 278 (591)
Q Consensus 219 ~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~----------~~~~~v~~~~~sp~~~~l~~~~~----------dg~i~i 278 (591)
+|++++ .+.+|.+++.|+.+...+.+..+. ...+....++++++++.+++... .+.|.+
T Consensus 237 dG~~~~-vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~v 315 (386)
T 3sjl_D 237 AGRLVW-PTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVV 315 (386)
T ss_dssp TTEEEE-EBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEE
T ss_pred CCcEEE-EeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEE
Confidence 665444 566799999999776433333332 01123345777999998888753 257999
Q ss_pred EEccCccccceeeehhhhccccccCCCCCeEEEecCCCCCC-eEEEEE-cCCEEEEEecccceEEEEeccCCCeeEEEEe
Q psy710 279 VNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPS-KLLLAY-ETGLVVHWDLKLKRAEFRWQCSEPIKSVCWH 356 (591)
Q Consensus 279 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~-~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~s 356 (591)
+|+.+.+...+ ...+ ..+.++++++ |++ +|++.. .++.|.++|..+++.+..+.....-+.|.++
T Consensus 316 iD~~t~kv~~~----------i~vg--~~~~~lavs~-D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~~~~~p~~l~~s 382 (386)
T 3sjl_D 316 LDAKTGERLAK----------FEMG--HEIDSINVSQ-DEKPLLYALSTGDKTLYIHDAESGEELRSVNQLGHGPQVITT 382 (386)
T ss_dssp EETTTCCEEEE----------EEEE--EEECEEEECS-SSSCEEEEEETTTTEEEEEETTTCCEEEEECCCCSSCCEEEE
T ss_pred EECCCCeEEEE----------EECC--CCcceEEECC-CCCeEEEEEcCCCCeEEEEECCCCcEEEEecCCCCCceeEEC
Confidence 99999887521 1111 3678999999 886 666654 4899999999999999999977888888888
Q ss_pred ec
Q psy710 357 YE 358 (591)
Q Consensus 357 p~ 358 (591)
+|
T Consensus 383 ~d 384 (386)
T 3sjl_D 383 AD 384 (386)
T ss_dssp CC
T ss_pred Cc
Confidence 77
No 191
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.69 E-value=8.2e-15 Score=137.86 Aligned_cols=237 Identities=8% Similarity=-0.009 Sum_probs=164.5
Q ss_pred eeEEEeeccceEEEEeeCCce-EEEEEeCCCcEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCcceeee
Q psy710 85 VHSLKFQRERITYIHLPLQSK-WLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFR 163 (591)
Q Consensus 85 ~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (591)
+..+..+.....+++|+|+++ .++++..++.|..|+..++ ...+.
T Consensus 20 ~~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~-------------------------------- 65 (296)
T 3e5z_A 20 ARRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEM-------------------------------- 65 (296)
T ss_dssp CEEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEE--------------------------------
T ss_pred EEEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEE--------------------------------
Confidence 344555556678999999998 7777778899999998875 22221
Q ss_pred ccCCCCceEEEECCCCCEEEEEeCCCcEEEeCCCCeEEEEeccC-----CCcEEEEEEEcCCceEEEEeC----------
Q psy710 164 HGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGVDAHVRHET-----DAAVIQMQFLTNEGALITATA---------- 228 (591)
Q Consensus 164 ~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-----~~~v~~~~~~~~~~~l~~~~~---------- 228 (591)
.....+.+++++++++++++...++.|.+||..+++....... ...+..++++|+|+++++...
T Consensus 66 -~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~ 144 (296)
T 3e5z_A 66 -HPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGY 144 (296)
T ss_dssp -SSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSS
T ss_pred -CCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccc
Confidence 1234578999999999877776678999999866654432211 235678999999998776321
Q ss_pred -------CCcEEEEEccCCCcceEEeeeeccccEEEEEecCCCCEEEEEeCCccEEEEEcc-Cccc-cceeeehhhhccc
Q psy710 229 -------DDSLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIE-SFTL-SGYIINWNKAIDV 299 (591)
Q Consensus 229 -------d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~i~d~~-~~~~-~~~~~~~~~~~~~ 299 (591)
.+.|..++.. + .+..+..+......++|+|+++.+++.+.++.|++|++. +++. ....
T Consensus 145 ~~~~~~~~~~l~~~~~~-g---~~~~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~--------- 211 (296)
T 3e5z_A 145 GGEMELPGRWVFRLAPD-G---TLSAPIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGV--------- 211 (296)
T ss_dssp CCCCCSSSCEEEEECTT-S---CEEEEECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEE---------
T ss_pred cccccCCCcEEEEECCC-C---CEEEeecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCe---------
Confidence 2345444444 3 233344455678899999999988777778899999987 4433 1100
Q ss_pred cccCCCCCeEEEecCCCCCCeEEEEEcCCEEEEEecccceEEEEec-cCCCeeEEEE-eecCCEEEEEecCCcEEEEecC
Q psy710 300 CMKTHPGPIIHLSDNPLDPSKLLLAYETGLVVHWDLKLKRAEFRWQ-CSEPIKSVCW-HYEGKQFLCSHTDGTISTWAVR 377 (591)
Q Consensus 300 ~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~-sp~g~~l~s~~~dg~i~vwd~~ 377 (591)
.+..+...+.++++++ ++++.++. ++.|.+||.. ++....+. +.. +.+++| +|+++.|++++.++ +|.++
T Consensus 212 ~~~~~~~~p~~i~~d~-~G~l~v~~--~~~v~~~~~~-g~~~~~~~~~~~-~~~~~f~~~d~~~L~v~t~~~---l~~~~ 283 (296)
T 3e5z_A 212 HFTVEPGKTDGLRVDA-GGLIWASA--GDGVHVLTPD-GDELGRVLTPQT-TSNLCFGGPEGRTLYMTVSTE---FWSIE 283 (296)
T ss_dssp EECCSSSCCCSEEEBT-TSCEEEEE--TTEEEEECTT-SCEEEEEECSSC-CCEEEEESTTSCEEEEEETTE---EEEEE
T ss_pred EeeCCCCCCCeEEECC-CCCEEEEc--CCeEEEECCC-CCEEEEEECCCC-ceeEEEECCCCCEEEEEcCCe---EEEEE
Confidence 1122445567899999 98866655 7899999987 55555555 444 999999 58999999888764 44444
No 192
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.69 E-value=4.1e-16 Score=164.99 Aligned_cols=244 Identities=8% Similarity=-0.018 Sum_probs=164.8
Q ss_pred cCCCCCCcEEEeCCCCcEEEEE-----eCCCcEEEEcCCCceeEeeccCCcce--EEEEEeecCCEEEEecCCCe-----
Q psy710 4 HGFPYQPTAIAFDPIQKLLAIG-----TKTGSLRLLGRPGVDAHVRHETDAAV--IQMQFLTNEGALITATADDS----- 71 (591)
Q Consensus 4 ~gh~~~v~~~~~spdg~~la~g-----~~dg~i~lw~~~~~~~~~~~~h~~~v--~~l~~sp~~~~l~s~~~d~~----- 71 (591)
.+|...+..++|||||++||.+ +.+..|++||+.+.+... ..+...+ ..++|+|||+.|+.++.|..
T Consensus 117 ~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~-~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~ 195 (695)
T 2bkl_A 117 KDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSK-VDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKV 195 (695)
T ss_dssp SSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCS-SCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCG
T ss_pred cCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcC-CcccCcccccceEEecCCCEEEEEEecCCCCCcc
Confidence 3566678999999999999944 345689999998544330 1122222 67899999999999888766
Q ss_pred --------EEEEeecccCce--eeeEEEeeccceEEEEeeCCceEEEEEeCCC----cEEEEEeeeeeeeceeccccccc
Q psy710 72 --------LHLWNFRQKRPE--IVHSLKFQRERITYIHLPLQSKWLYVGTEKG----NIHVVNIESFTLSGYIINWNKAI 137 (591)
Q Consensus 72 --------i~vw~~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~----~i~vwd~~~~~~~~~~~~~~~~~ 137 (591)
|++|++.++..+ .+.....+...+..+.|+|||++|+..+.++ .|++|+..+++.....
T Consensus 196 ~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~------- 268 (695)
T 2bkl_A 196 DERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLV------- 268 (695)
T ss_dssp GGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEE-------
T ss_pred ccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEee-------
Confidence 999999877522 3333344556788999999999998887655 5666654333221111
Q ss_pred ccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCCCCEEEEEeC----CCcEEEeCCCCeE-----EEEeccCC
Q psy710 138 DVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTK----TGSLRLLGRPGVD-----AHVRHETD 208 (591)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----dg~i~i~d~~~~~-----~~~~~~~~ 208 (591)
.+...+....+ ++++ ++..+. ++.|.+||+.+.. .+..+...
T Consensus 269 ---------------------------~~~~~~~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~ 319 (695)
T 2bkl_A 269 ---------------------------KGVGAKYEVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSS 319 (695)
T ss_dssp ---------------------------ECSSCCEEEEE-ETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSS
T ss_pred ---------------------------cCCCceEEEEe-cCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCC
Confidence 11223345555 5666 554443 5789999987653 22222224
Q ss_pred CcEEEEEEEcCCceEEEEeCCCcEEEEEccCCCcceEEeeeec-cccEEEEEecCCCCEEEEEe----CCccEEEEEccC
Q psy710 209 AAVIQMQFLTNEGALITATADDSLHLWNFRQKRPEIVHSLKFQ-RERITYIHLPLQSKWLYVGT----EKGNIHVVNIES 283 (591)
Q Consensus 209 ~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~-~~~v~~~~~sp~~~~l~~~~----~dg~i~i~d~~~ 283 (591)
..+..++|+ ++.++++...|+..++|.+... ......+..+ ...+..+.++|+++.++... ..++|++||+.+
T Consensus 320 ~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~-g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~ 397 (695)
T 2bkl_A 320 ASLLSVSIV-GGHLSLEYLKDATSEVRVATLK-GKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVST 397 (695)
T ss_dssp CEEEEEEEE-TTEEEEEEEETTEEEEEEEETT-CCEEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTT
T ss_pred CeEEEEEEE-CCEEEEEEEECCEEEEEEEeCC-CCeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCC
Confidence 568888998 7778888888998888876522 1455556554 56788889999998777333 346899999988
Q ss_pred ccc
Q psy710 284 FTL 286 (591)
Q Consensus 284 ~~~ 286 (591)
++.
T Consensus 398 g~~ 400 (695)
T 2bkl_A 398 GKS 400 (695)
T ss_dssp CCE
T ss_pred CcE
Confidence 764
No 193
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.68 E-value=2.8e-13 Score=130.65 Aligned_cols=292 Identities=7% Similarity=-0.058 Sum_probs=192.7
Q ss_pred EEeecCCEEEEecC--CC---eEEEEeecccCceeeeEEEeeccceEEEEeeCCceEEEEEe----------CCCcEEEE
Q psy710 55 QFLTNEGALITATA--DD---SLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGT----------EKGNIHVV 119 (591)
Q Consensus 55 ~~sp~~~~l~s~~~--d~---~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~d~~i~vw 119 (591)
...|++++++.... .. +|.++|..+++ .+..+.....+ .++++||++.++++. .++.|.+|
T Consensus 27 ~~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~--~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~vi 102 (373)
T 2mad_H 27 APGADGRRSYINLPAHHSAIIQQWVLDAGSGS--ILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVF 102 (373)
T ss_pred cCCCCCCEEEEeCCcccCCccEEEEEECCCCe--EEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEE
Confidence 34477777776653 22 88999998874 55666544333 899999999999986 36789999
Q ss_pred EeeeeeeeceecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCCCCEEEEEeC--CCcEEEeCCC
Q psy710 120 NIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTK--TGSLRLLGRP 197 (591)
Q Consensus 120 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~i~d~~ 197 (591)
|..+++.+..+..... .. .........++++|||++|+++.. ++.|.++| .
T Consensus 103 D~~t~~~~~~i~~~~~------------------------~~--~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~ 155 (373)
T 2mad_H 103 DPVTFLPIADIELPDA------------------------PR--FDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-Q 155 (373)
T ss_pred ECCCCcEEEEEECCCc------------------------cc--cccCCCccceEECCCCCEEEEEecCCCCeEEEEE-C
Confidence 9988776655431100 00 000123468999999999998874 47899999 8
Q ss_pred CeEEEEe-ccCCCcEEEEEEEcCCc-eEEEEeCCCcEEEEEccCCCcceEEeee-----eccccE-EEEEecCCCCEEEE
Q psy710 198 GVDAHVR-HETDAAVIQMQFLTNEG-ALITATADDSLHLWNFRQKRPEIVHSLK-----FQRERI-TYIHLPLQSKWLYV 269 (591)
Q Consensus 198 ~~~~~~~-~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~~wd~~~~~~~~~~~~~-----~~~~~v-~~~~~sp~~~~l~~ 269 (591)
+.+.... ..... ++.+.|+++ .+++.+.||.+.++|. ++ +...... ....++ ....+.+++..++.
T Consensus 156 t~~~~~~~i~~~~---~~~~~~~~~~~~~~~~~dg~~~~vd~-~g--~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 229 (373)
T 2mad_H 156 GGSSDDQLLSSPT---CYHIHPGAPSTFYLLCAQGGLAKTDH-AG--GAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVW 229 (373)
T ss_pred CCCEEeEEcCCCc---eEEEEeCCCceEEEEcCCCCEEEEEC-CC--cEEEEEeccccccCCcceeecceeEecCCEEEE
Confidence 8877655 44322 245556653 5566778999999999 66 3332211 111221 23456666655555
Q ss_pred EeCCccEEEEEccCccccceeeehh--hhccccccCCCCCeEEEecCCCCCCeEEEEEc----------CCEEEEEeccc
Q psy710 270 GTEKGNIHVVNIESFTLSGYIINWN--KAIDVCMKTHPGPIIHLSDNPLDPSKLLLAYE----------TGLVVHWDLKL 337 (591)
Q Consensus 270 ~~~dg~i~i~d~~~~~~~~~~~~~~--~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~----------dg~i~iwd~~~ 337 (591)
.+..+.+.+.|+......- ...+. ................+.++| +++.++++.. .+.|.++|..+
T Consensus 230 ~~~~~~v~vid~~~~~~~v-~~~~~~~~~~~~~~~~~p~g~~~~~~s~-d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t 307 (373)
T 2mad_H 230 PVYSGKILQADISAAGATN-KAPIDALSGGRKADTWRPGGWQQVAYLK-SSDGIYLLTSEQSAWKLHAAAKEVTSVTGLV 307 (373)
T ss_pred EcCCceEEEEeccCCcceE-eeeeeecCCcccccceecCceEeEEECC-CCCEEEEEeccCCcccccCCCCeEEEEECCC
Confidence 5577899999987643210 00000 000000011123344578999 9888887653 35899999999
Q ss_pred ceEEEEeccCCCeeEEEEeecCC-EEEEEe-cCCcEEEEecCCCCCceeee
Q psy710 338 KRAEFRWQCSEPIKSVCWHYEGK-QFLCSH-TDGTISTWAVRPLAKPVSVN 386 (591)
Q Consensus 338 ~~~~~~~~~~~~v~~~~~sp~g~-~l~s~~-~dg~i~vwd~~~~~~~~~~~ 386 (591)
++.+..+........++|+|||+ +++++. .++.|.++|.. +++.+..+
T Consensus 308 ~~vv~~i~~g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~-t~~vv~~i 357 (373)
T 2mad_H 308 GQTSSQISLGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAG-AGDQDQST 357 (373)
T ss_pred CEEEEEEECCCCcCeEEECCCCCeEEEEEcCCCCeEEEEECC-CCCEEeee
Confidence 99998888777899999999999 777776 58999999999 77777663
No 194
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.68 E-value=6.5e-15 Score=140.37 Aligned_cols=263 Identities=11% Similarity=0.072 Sum_probs=182.4
Q ss_pred CCCeEEEEeecccCceeeeEEE------eeccceEEEEeeCCceEEEEEeCCCcEEEEEeeeeeeeceecccccccccCC
Q psy710 68 ADDSLHLWNFRQKRPEIVHSLK------FQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCM 141 (591)
Q Consensus 68 ~d~~i~vw~~~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~ 141 (591)
.+++|.++|.++++ ....+. ........+.+. +++..++...++.|.+||..+++.+..+.
T Consensus 15 ~~~~l~~~d~~t~~--~~~~i~~~~n~~~lg~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i~---------- 81 (328)
T 3dsm_A 15 SNATLSYYDPATCE--VENEVFYRANGFKLGDVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRIT---------- 81 (328)
T ss_dssp CCBEEEEEETTTTE--EECSHHHHHHSSCCBSCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEEE----------
T ss_pred CCceEEEEECCCCE--EhhhhHhhhcCcccCccceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEEcC----------
Confidence 48999999999874 333221 112345677774 45555666667899999999987766553
Q ss_pred CCCCCceeccCCCCcCcceeeeccCCCCceEEEECCCCCEEEEEeCCCcEEEeCCCCeEEEEeccCCC------cEEEEE
Q psy710 142 KTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGVDAHVRHETDA------AVIQMQ 215 (591)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~------~v~~~~ 215 (591)
....+..++++++++++++...++.|.+||..+.+......... ....++
T Consensus 82 ------------------------~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~ 137 (328)
T 3dsm_A 82 ------------------------GFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMV 137 (328)
T ss_dssp ------------------------CCSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEE
T ss_pred ------------------------CCCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEE
Confidence 12346899999988544444478999999999887664333222 556677
Q ss_pred EEcCCceEEEEe--CCCcEEEEEccCCCcceEEeeeeccccEEEEEecCCCCEEEEEeCC----------ccEEEEEccC
Q psy710 216 FLTNEGALITAT--ADDSLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEK----------GNIHVVNIES 283 (591)
Q Consensus 216 ~~~~~~~l~~~~--~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d----------g~i~i~d~~~ 283 (591)
+ .++ .|+++. .++.|.++|..++ +.+..+... .....++++|+|++++++..+ +.|.++|..+
T Consensus 138 ~-~~~-~lyv~~~~~~~~v~viD~~t~--~~~~~i~~g-~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t 212 (328)
T 3dsm_A 138 Q-YGK-YVYVNCWSYQNRILKIDTETD--KVVDELTIG-IQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAET 212 (328)
T ss_dssp E-ETT-EEEEEECTTCCEEEEEETTTT--EEEEEEECS-SCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTT
T ss_pred E-ECC-EEEEEcCCCCCEEEEEECCCC--eEEEEEEcC-CCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCC
Confidence 7 344 455444 4889999999987 566666543 345688999999977766554 7899999988
Q ss_pred ccccceeeehhhhcccccc-CCCCCeEEEecCCCCCCeEEEEEcCCEEEEEecccceEEEE--ecc-CCCeeEEEEee-c
Q psy710 284 FTLSGYIINWNKAIDVCMK-THPGPIIHLSDNPLDPSKLLLAYETGLVVHWDLKLKRAEFR--WQC-SEPIKSVCWHY-E 358 (591)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~~l~~~~~dg~i~iwd~~~~~~~~~--~~~-~~~v~~~~~sp-~ 358 (591)
++... .+. ........++++| ++++|+++.. .|.+||..++++... ... ......++++| +
T Consensus 213 ~~v~~-----------~~~~~~g~~p~~la~~~-d~~~lyv~~~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~ 278 (328)
T 3dsm_A 213 FTVEK-----------QFKFKLGDWPSEVQLNG-TRDTLYWINN--DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNN 278 (328)
T ss_dssp TEEEE-----------EEECCTTCCCEEEEECT-TSCEEEEESS--SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTT
T ss_pred CeEEE-----------EEecCCCCCceeEEEec-CCCEEEEEcc--EEEEEECCCCceeeeeeecCCCCceEEEEEcCCC
Confidence 76632 111 1123678999999 9999888755 899999998876421 111 46788999999 5
Q ss_pred CCEEEEE----ecCCcEEEEecCCCCCceeeecc
Q psy710 359 GKQFLCS----HTDGTISTWAVRPLAKPVSVNQP 388 (591)
Q Consensus 359 g~~l~s~----~~dg~i~vwd~~~~~~~~~~~~~ 388 (591)
++++++. ..++.|.+||.. ++.+..+..
T Consensus 279 g~lyva~~~~y~~~~~V~v~d~~--g~~~~~i~~ 310 (328)
T 3dsm_A 279 GEVYVADAIDYQQQGIVYRYSPQ--GKLIDEFYV 310 (328)
T ss_dssp CCEEEEECTTSSSEEEEEEECTT--CCEEEEEEE
T ss_pred CeEEEEcccccccCCEEEEECCC--CCEEEEEEe
Confidence 5666665 568899999997 777666543
No 195
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.67 E-value=1.3e-14 Score=134.45 Aligned_cols=239 Identities=8% Similarity=-0.050 Sum_probs=168.1
Q ss_pred CCcEEEeCCCCcEEE-EEeCCCcEEEEcCCCceeEee-ccCCcceEEEEEeecCCEEEEecCCCeEEEEeecccCceeee
Q psy710 9 QPTAIAFDPIQKLLA-IGTKTGSLRLLGRPGVDAHVR-HETDAAVIQMQFLTNEGALITATADDSLHLWNFRQKRPEIVH 86 (591)
Q Consensus 9 ~v~~~~~spdg~~la-~g~~dg~i~lw~~~~~~~~~~-~~h~~~v~~l~~sp~~~~l~s~~~d~~i~vw~~~~~~~~~~~ 86 (591)
...+++++++|++++ +...++.|.+|+..+.....+ ..+...+.++++.++++++++.. ++.|.+||..... ..
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~---~~ 100 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNN---QT 100 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSC---CE
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCce---Ee
Confidence 678999999999777 446788999999765443333 23345788999999998666665 8899999987653 22
Q ss_pred EEE-eeccceEEEEeeCCceEEEEEeCCCcEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCcceeeecc
Q psy710 87 SLK-FQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHG 165 (591)
Q Consensus 87 ~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (591)
.+. .....+..+++.++++.+++...++.|.+|+..+...... ...
T Consensus 101 ~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~---------------------------------~~~ 147 (270)
T 1rwi_B 101 VLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVL---------------------------------PFT 147 (270)
T ss_dssp ECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEEC---------------------------------CCC
T ss_pred eeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEee---------------------------------ccc
Confidence 222 2225688999999998777766778899886543221100 011
Q ss_pred CCCCceEEEECCCCCEEEEEeCCCcEEEeCCCCeEEEEeccC-CCcEEEEEEEcCCceEEEEeCCCcEEEEEccCCCcce
Q psy710 166 FPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGVDAHVRHET-DAAVIQMQFLTNEGALITATADDSLHLWNFRQKRPEI 244 (591)
Q Consensus 166 ~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~ 244 (591)
....+..++++++++++++...++.|.+|+..+......... ...+..++++++|..+++...++.|.+|+.... ..
T Consensus 148 ~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~--~~ 225 (270)
T 1rwi_B 148 GLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGST--TS 225 (270)
T ss_dssp SCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCS--CC
T ss_pred cCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCC--cc
Confidence 123468899999999777777788999999887665443222 257889999999977777777889999998765 22
Q ss_pred EEeeeeccccEEEEEecCCCCEEEEEeCCccEEEEEccCccc
Q psy710 245 VHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTL 286 (591)
Q Consensus 245 ~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~ 286 (591)
......+...+.+++++++|+++++...++.|+++++...+.
T Consensus 226 ~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~~~ 267 (270)
T 1rwi_B 226 TVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLEHHH 267 (270)
T ss_dssp EECCCCSCSCEEEEEECTTCCEEEEEGGGTEEEEECCCGGGS
T ss_pred eeeccCCCCCceeEEECCCCCEEEEECCCCEEEEEcCCCccc
Confidence 222222335689999999999888888899999999876543
No 196
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.67 E-value=3e-14 Score=135.15 Aligned_cols=298 Identities=11% Similarity=0.034 Sum_probs=199.4
Q ss_pred EEEeecCCEEEEecC-----CCeEEEEeecccCceeeeEEEeeccceEEEEeeCCceEEEEEe----------CCCcEEE
Q psy710 54 MQFLTNEGALITATA-----DDSLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGT----------EKGNIHV 118 (591)
Q Consensus 54 l~~sp~~~~l~s~~~-----d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~d~~i~v 118 (591)
....|+++.++.... ++.|.+.|..++ +.+..+.....+ . ++++||+++++++. .++.|.+
T Consensus 38 ~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~--~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~Vsv 113 (386)
T 3sjl_D 38 EAPAPDARRVYVNDPAHFAAVTQQFVIDGEAG--RVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEV 113 (386)
T ss_dssp CCCCCCTTEEEEEECGGGCSSEEEEEEETTTT--EEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEE
T ss_pred eccCCCCCEEEEEcCcccCCCCEEEEEECCCC--eEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEE
Confidence 455789988887754 679999999887 467777765555 4 99999999998876 3678999
Q ss_pred EEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCCCCEEEEEeC--CCcEEEeCC
Q psy710 119 VNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTK--TGSLRLLGR 196 (591)
Q Consensus 119 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~i~d~ 196 (591)
||..+++.+..+......- .........++|+|||++++++.. ++.|.++|.
T Consensus 114 iD~~t~~v~~~I~v~~g~r--------------------------~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~ 167 (386)
T 3sjl_D 114 FDPVTLLPTADIELPDAPR--------------------------FLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDL 167 (386)
T ss_dssp ECTTTCCEEEEEEETTCCC--------------------------CCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEET
T ss_pred EECCCCeEEEEEECCCccc--------------------------cccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEEC
Confidence 9999988776654211000 001124578999999999988864 689999999
Q ss_pred CCeEEEEeccCCCcEEEEEEEcCCceEEEEeCCCcEEEEEccC-CCcceEEeeeec----cccEE-EEEe-cCCCCEEEE
Q psy710 197 PGVDAHVRHETDAAVIQMQFLTNEGALITATADDSLHLWNFRQ-KRPEIVHSLKFQ----RERIT-YIHL-PLQSKWLYV 269 (591)
Q Consensus 197 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~-~~~~~~~~~~~~----~~~v~-~~~~-sp~~~~l~~ 269 (591)
.+.+......-... ...+....+.+++.+.||.+.+.++.. ++ ........ ..++. ...| .++|++++
T Consensus 168 ~t~~vv~tI~v~g~--~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~--v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~- 242 (386)
T 3sjl_D 168 EGKAFKRMLDVPDC--YHIFPTAPDTFFMHCRDGSLAKVAFGTEGT--PEITHTEVFHPEDEFLINHPAYSQKAGRLVW- 242 (386)
T ss_dssp TTTEEEEEEECCSE--EEEEEEETTEEEEEETTSCEEEEECCSSSC--CEEEECCCCSCTTSCBCSCCEEETTTTEEEE-
T ss_pred CCCcEEEEEECCCc--ceeecCCCceeEEECCCCCEEEEECCCCCe--EEEeecceeccccccccccceeEcCCCcEEE-
Confidence 99887765543221 233443456777888899999999876 42 22211111 11221 2344 36776655
Q ss_pred EeCCccEEEEEccCcccc-ceeee-hhhhccccccCCCCCeEEEecCCCCCCeEEEEEc----------CCEEEEEeccc
Q psy710 270 GTEKGNIHVVNIESFTLS-GYIIN-WNKAIDVCMKTHPGPIIHLSDNPLDPSKLLLAYE----------TGLVVHWDLKL 337 (591)
Q Consensus 270 ~~~dg~i~i~d~~~~~~~-~~~~~-~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~----------dg~i~iwd~~~ 337 (591)
.+.+|++++.|+.+.... ...+. +... .....-..+....++++| +++.++.... ...|.+.|+.+
T Consensus 243 vs~~g~V~v~d~~~~~~~v~~~~~~~~~~-~~~~g~~p~g~q~~a~~~-~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t 320 (386)
T 3sjl_D 243 PTYTGKIHQIDLSSGDAKFLPAVEALTEA-ERADGWRPGGWQQVAYHR-ALDRIYLLVDQRDEWRHKTASRFVVVLDAKT 320 (386)
T ss_dssp EBTTSEEEEEECTTSSCEECCCEESSCHH-HHHTTEEECSSSCEEEET-TTTEEEEEEEECCTTCTTSCEEEEEEEETTT
T ss_pred EeCCCEEEEEECCCCcceeecceeccccc-cccccccCCCcceeeECC-CCCeEEEEeccccccccCCCCCEEEEEECCC
Confidence 566899999999765431 00000 0000 000001112233467788 8888888653 25799999999
Q ss_pred ceEEEEeccCCCeeEEEEeecCC-EEEEE-ecCCcEEEEecCCCCCceeeeccc
Q psy710 338 KRAEFRWQCSEPIKSVCWHYEGK-QFLCS-HTDGTISTWAVRPLAKPVSVNQPH 389 (591)
Q Consensus 338 ~~~~~~~~~~~~v~~~~~sp~g~-~l~s~-~~dg~i~vwd~~~~~~~~~~~~~~ 389 (591)
++++..+.-...+.++++++|++ +|+++ ..++.|.++|.. +++.++++...
T Consensus 321 ~kv~~~i~vg~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~-t~k~~~~i~~~ 373 (386)
T 3sjl_D 321 GERLAKFEMGHEIDSINVSQDEKPLLYALSTGDKTLYIHDAE-SGEELRSVNQL 373 (386)
T ss_dssp CCEEEEEEEEEEECEEEECSSSSCEEEEEETTTTEEEEEETT-TCCEEEEECCC
T ss_pred CeEEEEEECCCCcceEEECCCCCeEEEEEcCCCCeEEEEECC-CCcEEEEecCC
Confidence 99999988777899999999997 66665 458999999999 78888776554
No 197
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.67 E-value=1.3e-14 Score=134.55 Aligned_cols=236 Identities=8% Similarity=-0.054 Sum_probs=167.0
Q ss_pred ceEEEEeeCCceEEE-EEeCCCcEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceE
Q psy710 94 RITYIHLPLQSKWLY-VGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTA 172 (591)
Q Consensus 94 ~v~~~~~~~~~~~l~-~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 172 (591)
...+++++++++.++ +...++.|.+|+..+....... ......+.+
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~---------------------------------~~~~~~p~~ 71 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLP---------------------------------FNGLYQPQG 71 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECC---------------------------------CCSCCSCCC
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEe---------------------------------eCCcCCcce
Confidence 678899999998666 4466789999987653321110 012234688
Q ss_pred EEECCCCCEEEEEeCCCcEEEeCCCCeEEEEecc-CCCcEEEEEEEcCCceEEEEeCCCcEEEEEccCCCcceEEeeeec
Q psy710 173 IAFDPIQKLLAIGTKTGSLRLLGRPGVDAHVRHE-TDAAVIQMQFLTNEGALITATADDSLHLWNFRQKRPEIVHSLKFQ 251 (591)
Q Consensus 173 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~ 251 (591)
++++++++++++.. ++.|.+||..+........ ....+..++++++++.+++...++.|.+|+..+. .........
T Consensus 72 i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~--~~~~~~~~~ 148 (270)
T 1rwi_B 72 LAVDGAGTVYVTDF-NNRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSK--TQTVLPFTG 148 (270)
T ss_dssp EEECTTCCEEEEET-TTEEEEECTTCSCCEECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCC--SCEECCCCS
T ss_pred eEECCCCCEEEEcC-CCEEEEEeCCCceEeeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCc--eeEeecccc
Confidence 99999998655555 8899999987765443322 2357899999999987777777888999976544 222222222
Q ss_pred cccEEEEEecCCCCEEEEEeCCccEEEEEccCccccceeeehhhhccccccCCCCCeEEEecCCCCCCeEEEEEcCCEEE
Q psy710 252 RERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKLLLAYETGLVV 331 (591)
Q Consensus 252 ~~~v~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~ 331 (591)
...+..++++++|+++++...++.|.+||....... .....+...+.++++++ ++.++++...++.|.
T Consensus 149 ~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~-----------~~~~~~~~~p~~i~~d~-~g~l~v~~~~~~~v~ 216 (270)
T 1rwi_B 149 LNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQV-----------VLPFTDITAPWGIAVDE-AGTVYVTEHNTNQVV 216 (270)
T ss_dssp CCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEE-----------ECCCSSCCSEEEEEECT-TCCEEEEETTTSCEE
T ss_pred CCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceE-----------eecccCCCCceEEEECC-CCCEEEEECCCCcEE
Confidence 345788999999997776666789999998765442 11222336788999999 887666666788999
Q ss_pred EEecccceEEEEec-cCCCeeEEEEeecCCEEEEEecCCcEEEEecC
Q psy710 332 HWDLKLKRAEFRWQ-CSEPIKSVCWHYEGKQFLCSHTDGTISTWAVR 377 (591)
Q Consensus 332 iwd~~~~~~~~~~~-~~~~v~~~~~sp~g~~l~s~~~dg~i~vwd~~ 377 (591)
+||..+........ +...+.+++++++|+++++...++.|+++++.
T Consensus 217 ~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~ 263 (270)
T 1rwi_B 217 KLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSL 263 (270)
T ss_dssp EECTTCSCCEECCCCSCSCEEEEEECTTCCEEEEEGGGTEEEEECCC
T ss_pred EEcCCCCcceeeccCCCCCceeEEECCCCCEEEEECCCCEEEEEcCC
Confidence 99998765443322 33678999999999988888899999999998
No 198
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.67 E-value=4.2e-13 Score=126.40 Aligned_cols=280 Identities=7% Similarity=0.002 Sum_probs=191.1
Q ss_pred cCCcceEEEEEeecCCEEEEecCCCeEEEEeecccCceeeeEEEeeccceEEEEeeCCceEEEEEeCCCcEEEEEeeeee
Q psy710 46 ETDAAVIQMQFLTNEGALITATADDSLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFT 125 (591)
Q Consensus 46 ~h~~~v~~l~~sp~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~ 125 (591)
.....+.++++.++|+..++...++.|.+|+.. ++. ....+......+..+++.++++..++...++.|..+|.. ++
T Consensus 17 ~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~-~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~ 93 (300)
T 2qc5_A 17 IPDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRI-KEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GG 93 (300)
T ss_dssp STTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE-EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SC
T ss_pred CCCCCcceeeECCCCCEEEEcCCCCeEEEECCC-Cce-EEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CC
Confidence 345678999999999988877778999999987 542 111222233568899999999877776667889999876 44
Q ss_pred eeceecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCCCCEEEEEeCCCcEEEeCCCCeEEEEec
Q psy710 126 LSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGVDAHVRH 205 (591)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~ 205 (591)
...... ......+..++++++++++++...++.|..++..........
T Consensus 94 ~~~~~~--------------------------------~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~ 141 (300)
T 2qc5_A 94 FTEYPL--------------------------------PQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTADGTIYEYDL 141 (300)
T ss_dssp EEEEEC--------------------------------SSTTCCEEEEEECSTTCEEEEETTTTEEEEECTTSCEEEEEC
T ss_pred eEEecC--------------------------------CCCCCCCccceECCCCCEEEEccCCCeEEEECCCCCEEEccC
Confidence 321100 011245789999999987777766889999998743322222
Q ss_pred c-CCCcEEEEEEEcCCceEEEEeCCCcEEEEEccCCCcceEEeeeeccccEEEEEecCCCCEEEEEeCCccEEEEEccCc
Q psy710 206 E-TDAAVIQMQFLTNEGALITATADDSLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESF 284 (591)
Q Consensus 206 ~-~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~i~d~~~~ 284 (591)
. ....+..+++.++++.+++...++.|..+|. +++ ........+...+..++++++|++.++....+.|.+|+. ++
T Consensus 142 ~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~-~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g 218 (300)
T 2qc5_A 142 PNKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGK-LEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TG 218 (300)
T ss_dssp SSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCC-EEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TC
T ss_pred CCCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCc-EEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CC
Confidence 2 3457899999999986666666788999998 442 111222233456889999999987666666678999998 44
Q ss_pred cccceeeehhhhccccccCCCCCeEEEecCCCCCCeEEEEEcCCEEEEEecccceEEEE-ec-cCCCeeEEEEeecCCEE
Q psy710 285 TLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKLLLAYETGLVVHWDLKLKRAEFR-WQ-CSEPIKSVCWHYEGKQF 362 (591)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~iwd~~~~~~~~~-~~-~~~~v~~~~~sp~g~~l 362 (591)
+... .....+...+.++++.+ ++++.++...++.|..||.. ++.... .. ....+.+++++++|++.
T Consensus 219 ~~~~----------~~~~~~~~~~~~i~~d~-~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~ 286 (300)
T 2qc5_A 219 EISE----------YDIPTPNARPHAITAGK-NSEIWFTEWGANQIGRITND-NTIQEYQLQTENAEPHGITFGKDGSVW 286 (300)
T ss_dssp CEEE----------EECSSTTCCEEEEEECS-TTCEEEEETTTTEEEEECTT-SCEEEEECCSTTCCCCCEEECTTSCEE
T ss_pred cEEE----------EECCCCCCCceEEEECC-CCCEEEeccCCCeEEEECCC-CcEEEEECCccCCccceeEeCCCCCEE
Confidence 3321 11223456788999999 88866665567899999984 444432 22 34678899999999866
Q ss_pred EEEecCCcEEEEecC
Q psy710 363 LCSHTDGTISTWAVR 377 (591)
Q Consensus 363 ~s~~~dg~i~vwd~~ 377 (591)
++.. . .|..+|.+
T Consensus 287 v~~~-~-~i~~~~p~ 299 (300)
T 2qc5_A 287 FALK-C-KIGKLNLN 299 (300)
T ss_dssp EECS-S-EEEEEEEC
T ss_pred EEcc-C-ceEEeCCC
Confidence 6554 4 66666654
No 199
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.66 E-value=6.2e-13 Score=128.29 Aligned_cols=274 Identities=9% Similarity=-0.042 Sum_probs=184.5
Q ss_pred EeCCCCcEEEEEeC--CC---cEEEEcCC-CceeEeeccCCcceEEEEEeecCCEEEEec----------CCCeEEEEee
Q psy710 14 AFDPIQKLLAIGTK--TG---SLRLLGRP-GVDAHVRHETDAAVIQMQFLTNEGALITAT----------ADDSLHLWNF 77 (591)
Q Consensus 14 ~~spdg~~la~g~~--dg---~i~lw~~~-~~~~~~~~~h~~~v~~l~~sp~~~~l~s~~----------~d~~i~vw~~ 77 (591)
...|+++++.+... .. .|.++|.. ++.+..+.....+ .++|+||+++|+.+. .++.|.+||.
T Consensus 27 ~~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~ 104 (373)
T 2mad_H 27 APGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDP 104 (373)
T ss_pred cCCCCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEEC
Confidence 45578887777653 22 78999987 4555555544444 999999999998875 3678999999
Q ss_pred cccCceeeeEEEee-------ccceEEEEeeCCceEEEEEeC--CCcEEEEEeeeeeeece-ecccccccccCCCCCCCc
Q psy710 78 RQKRPEIVHSLKFQ-------RERITYIHLPLQSKWLYVGTE--KGNIHVVNIESFTLSGY-IINWNKAIDVCMKTHPGP 147 (591)
Q Consensus 78 ~~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~l~~~~~--d~~i~vwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 147 (591)
.+.+ .+..+... ......++|+|||++|+++.. ++.|.++| .+++.... +.
T Consensus 105 ~t~~--~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~---------------- 165 (373)
T 2mad_H 105 VTFL--PIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLS---------------- 165 (373)
T ss_pred CCCc--EEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcC----------------
Confidence 8764 44444322 123457899999999999874 47899999 88776554 32
Q ss_pred eeccCCCCcCcceeeeccCCCCceEEEECCCC-CEEEEEeCCCcEEEeCCCCeEEEEec------cCCCc-EEEEEEEcC
Q psy710 148 IIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQ-KLLAIGTKTGSLRLLGRPGVDAHVRH------ETDAA-VIQMQFLTN 219 (591)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~------~~~~~-v~~~~~~~~ 219 (591)
.. .++.+.|++ +.+++.+.||.+.+++. ..+..... ....+ .....+.++
T Consensus 166 ------------------~~---~~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~ 223 (373)
T 2mad_H 166 ------------------SP---TCYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANK 223 (373)
T ss_pred ------------------CC---ceEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEec
Confidence 01 134444544 44556667888888888 55443111 11112 233566777
Q ss_pred CceEEEEeCCCcEEEEEccCCCcceEEeeee----------ccccEEEEEecCCCCEEEEEeC----------CccEEEE
Q psy710 220 EGALITATADDSLHLWNFRQKRPEIVHSLKF----------QRERITYIHLPLQSKWLYVGTE----------KGNIHVV 279 (591)
Q Consensus 220 ~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~----------~~~~v~~~~~sp~~~~l~~~~~----------dg~i~i~ 279 (591)
+..++..+..+.+.+.|+.......+..+.. .......+.++|+++.++++.. .+.|.++
T Consensus 224 ~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VI 303 (373)
T 2mad_H 224 SGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSV 303 (373)
T ss_pred CCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEE
Confidence 6665555577899999997653333333321 1223445789999998888654 3579999
Q ss_pred EccCccccceeeehhhhccccccCCCCCeEEEecCCCCCC-eEEEEE-cCCEEEEEecccceEEEE
Q psy710 280 NIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPS-KLLLAY-ETGLVVHWDLKLKRAEFR 343 (591)
Q Consensus 280 d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~-~l~~~~-~dg~i~iwd~~~~~~~~~ 343 (591)
|..+.+... .+. -.....+++|+| |++ +++++. .++.|.++|+.+++.+..
T Consensus 304 D~~t~~vv~-----------~i~-~g~~p~~i~~s~-Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~ 356 (373)
T 2mad_H 304 TGLVGQTSS-----------QIS-LGHDVDAISVAQ-DGGPDLYALSAGTEVLHIYDAGAGDQDQS 356 (373)
T ss_pred ECCCCEEEE-----------EEE-CCCCcCeEEECC-CCCeEEEEEcCCCCeEEEEECCCCCEEee
Confidence 999887742 221 123578999999 999 777776 489999999999998877
No 200
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.65 E-value=1.4e-14 Score=154.37 Aligned_cols=278 Identities=9% Similarity=0.084 Sum_probs=174.6
Q ss_pred CCCCcEEEEEeCCCc---EEEEc--CC---CceeEee-------ccCCcceEEEEEeecCCEEEEecCC-----CeEEEE
Q psy710 16 DPIQKLLAIGTKTGS---LRLLG--RP---GVDAHVR-------HETDAAVIQMQFLTNEGALITATAD-----DSLHLW 75 (591)
Q Consensus 16 spdg~~la~g~~dg~---i~lw~--~~---~~~~~~~-------~~h~~~v~~l~~sp~~~~l~s~~~d-----~~i~vw 75 (591)
+|||++++....++. -.+|. .. +.....+ .+|...+..++|||||++|+.++.+ ..|++|
T Consensus 115 ~pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~ 194 (741)
T 1yr2_A 115 QRRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFV 194 (741)
T ss_dssp EEETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCSEEEEEEE
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEE
Confidence 489998887654432 45554 32 3333332 2344478899999999999876543 469999
Q ss_pred eecccCceeeeEEEeeccceEEEEeeCCceEEEEEeCCCc--------------EEEEEeeeeeeeceecccccccccCC
Q psy710 76 NFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEKGN--------------IHVVNIESFTLSGYIINWNKAIDVCM 141 (591)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~--------------i~vwd~~~~~~~~~~~~~~~~~~~~~ 141 (591)
|+.+++. +. ...+...+..++|+|| +.|+.++.++. |++|++.+++....+.
T Consensus 195 dl~tg~~--~~-~~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv---------- 260 (741)
T 1yr2_A 195 GVADGKP--LA-DELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPV---------- 260 (741)
T ss_dssp ETTTCCE--EE-EEEEEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEE----------
T ss_pred ECCCCCC--CC-ccCCCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEE----------
Confidence 9998862 22 1222222357899999 98888876554 7777776543111000
Q ss_pred CCCCCceeccCCCCcCcceeee-ccCCCCceEEEECCCCCEEEEEeCCC-----cEEEeCCCCe--E-EEEeccCCCcEE
Q psy710 142 KTHPGPIIHLSDNPLDPSKTFR-HGFPYQPTAIAFDPIQKLLAIGTKTG-----SLRLLGRPGV--D-AHVRHETDAAVI 212 (591)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~dg-----~i~i~d~~~~--~-~~~~~~~~~~v~ 212 (591)
+. ..+...+..+.|+|||++|+....++ .|++||+.+. + ......+...+.
T Consensus 261 --------------------~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~ 320 (741)
T 1yr2_A 261 --------------------FATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQW 320 (741)
T ss_dssp --------------------ECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCE
T ss_pred --------------------eccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceE
Confidence 00 11223467899999999888877544 8999998655 3 333333333444
Q ss_pred EEEEEcCCceEEEEeCC----CcEEEEEccCCCcceEEeeeeccccEEEEEecCCCCEEEEEeCCccEEEEEcc-Ccccc
Q psy710 213 QMQFLTNEGALITATAD----DSLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIE-SFTLS 287 (591)
Q Consensus 213 ~~~~~~~~~~l~~~~~d----~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~i~d~~-~~~~~ 287 (591)
.. ++|+++.|+..+.+ +.|.+||+.+........+..+...+..+.++ ++.++++...|+..++|.+. +++..
T Consensus 321 ~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~ 398 (741)
T 1yr2_A 321 DF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA-GNRLFASYIHDAKSQVLAFDLDGKPA 398 (741)
T ss_dssp EE-EEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTEEEEEEEETTSCEE
T ss_pred EE-EeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCce
Confidence 44 34889888877653 45999998764202333344444556677776 66777888888877777654 22221
Q ss_pred ceeeehhhhccccccC-CCCCeEEEecCCCCCCeEEEEE----cCCEEEEEecccceEE
Q psy710 288 GYIINWNKAIDVCMKT-HPGPIIHLSDNPLDPSKLLLAY----ETGLVVHWDLKLKRAE 341 (591)
Q Consensus 288 ~~~~~~~~~~~~~~~~-~~~~v~~~~~sp~~~~~l~~~~----~dg~i~iwd~~~~~~~ 341 (591)
..+.. +.+.+..+.++| +++.|+... ..++|++||+.+++..
T Consensus 399 -----------~~l~~~~~~~v~~~~~s~-d~~~l~~~~ss~~~P~~i~~~d~~tg~~~ 445 (741)
T 1yr2_A 399 -----------GAVSLPGIGSASGLSGRP-GDRHAYLSFSSFTQPATVLALDPATAKTT 445 (741)
T ss_dssp -----------EECBCSSSCEEEEEECCB-TCSCEEEEEEETTEEEEEEEEETTTTEEE
T ss_pred -----------eeccCCCCeEEEEeecCC-CCCEEEEEEcCCCCCCEEEEEECCCCcEE
Confidence 12222 356788999999 888666432 2478999999988743
No 201
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.64 E-value=7e-13 Score=124.82 Aligned_cols=278 Identities=12% Similarity=0.026 Sum_probs=188.0
Q ss_pred CCCCcEEEeCCCCcEEEEEeCCCcEEEEcCCCceeEe--eccCCcceEEEEEeecCCEEEEecCCCeEEEEeecccCcee
Q psy710 7 PYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGVDAHV--RHETDAAVIQMQFLTNEGALITATADDSLHLWNFRQKRPEI 84 (591)
Q Consensus 7 ~~~v~~~~~spdg~~la~g~~dg~i~lw~~~~~~~~~--~~~h~~~v~~l~~sp~~~~l~s~~~d~~i~vw~~~~~~~~~ 84 (591)
...+.+++++++|++.++...++.|.+|+..+ .... +..+...+..+++.++++..++...++.|..+|.. ++. .
T Consensus 19 ~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~-~ 95 (300)
T 2qc5_A 19 DSGPYGITSSEDGKVWFTQHKANKISSLDQSG-RIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGF-T 95 (300)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTTS-CEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE-E
T ss_pred CCCcceeeECCCCCEEEEcCCCCeEEEECCCC-ceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCe-E
Confidence 35678999999999888776788999999873 3332 23344678999999999887777668899999987 531 1
Q ss_pred eeEEEeeccceEEEEeeCCceEEEEEeCCCcEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCcceeeec
Q psy710 85 VHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRH 164 (591)
Q Consensus 85 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (591)
...+......+..+++.++++++++...++.|..++.. ++...... .
T Consensus 96 ~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~--------------------------------~ 142 (300)
T 2qc5_A 96 EYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDL--------------------------------P 142 (300)
T ss_dssp EEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEEC--------------------------------S
T ss_pred EecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccC--------------------------------C
Confidence 12222233568899999999877777667889988876 44321110 0
Q ss_pred cCCCCceEEEECCCCCEEEEEeCCCcEEEeCCCCeEEEEec-cCCCcEEEEEEEcCCceEEEEeCCCcEEEEEccCCCcc
Q psy710 165 GFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGVDAHVRH-ETDAAVIQMQFLTNEGALITATADDSLHLWNFRQKRPE 243 (591)
Q Consensus 165 ~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~ 243 (591)
.....+..+++++++++.++...++.|..++.......... .....+..+++.++++..++....+.|.+||. ++. .
T Consensus 143 ~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~-~ 220 (300)
T 2qc5_A 143 NKGSYPAFITLGSDNALWFTENQNNSIGRITNTGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGE-I 220 (300)
T ss_dssp STTCCEEEEEECTTSSEEEEETTTTEEEEECTTCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCC-E
T ss_pred CCCCCceeEEECCCCCEEEEecCCCeEEEECCCCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCc-E
Confidence 11245689999999996666666788999998433222221 22346889999999977666666778999998 332 1
Q ss_pred eEEeeeeccccEEEEEecCCCCEEEEEeCCccEEEEEccCccccceeeehhhhccccccCCCCCeEEEecCCCCCCeEEE
Q psy710 244 IVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKLLL 323 (591)
Q Consensus 244 ~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~ 323 (591)
....+..+...+.+++++++|++.++...++.|..|+.. ++... .........+.++++.+ ++++.++
T Consensus 221 ~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~-g~~~~----------~~~~~~~~~~~~i~~~~-~g~l~v~ 288 (300)
T 2qc5_A 221 SEYDIPTPNARPHAITAGKNSEIWFTEWGANQIGRITND-NTIQE----------YQLQTENAEPHGITFGK-DGSVWFA 288 (300)
T ss_dssp EEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEE----------EECCSTTCCCCCEEECT-TSCEEEE
T ss_pred EEEECCCCCCCceEEEECCCCCEEEeccCCCeEEEECCC-CcEEE----------EECCccCCccceeEeCC-CCCEEEE
Confidence 222233344668899999999866665567899999983 43321 11223345678899999 8775554
Q ss_pred EEcCCEEEEEecc
Q psy710 324 AYETGLVVHWDLK 336 (591)
Q Consensus 324 ~~~dg~i~iwd~~ 336 (591)
.. . .|..+|.+
T Consensus 289 ~~-~-~i~~~~p~ 299 (300)
T 2qc5_A 289 LK-C-KIGKLNLN 299 (300)
T ss_dssp CS-S-EEEEEEEC
T ss_pred cc-C-ceEEeCCC
Confidence 44 4 66666643
No 202
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.64 E-value=6.9e-14 Score=129.10 Aligned_cols=218 Identities=11% Similarity=-0.008 Sum_probs=164.0
Q ss_pred CCcEEEEEeCCCcEEEEcC-CCceeEeeccCC-cceEEEEEeecCCEEEEecCCCeEEEEeecccCceeeeEEEeec-cc
Q psy710 18 IQKLLAIGTKTGSLRLLGR-PGVDAHVRHETD-AAVIQMQFLTNEGALITATADDSLHLWNFRQKRPEIVHSLKFQR-ER 94 (591)
Q Consensus 18 dg~~la~g~~dg~i~lw~~-~~~~~~~~~~h~-~~v~~l~~sp~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~-~~ 94 (591)
.+++|++++.++.|.+||. +++.+..+..+. ..+.++.++|+|++|++ .++.|..||. +++ .+..+..+. ..
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilvs--~~~~V~~~d~-~G~--~~W~~~~~~~~~ 78 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFS--YSKGAKMITR-DGR--ELWNIAAPAGCE 78 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEEE--CBSEEEEECT-TSC--EEEEEECCTTCE
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEEe--CCCCEEEECC-CCC--EEEEEcCCCCcc
Confidence 4688999999999999999 588887887766 57899999999998883 4788999998 663 677777653 46
Q ss_pred eEEEEeeCCceEEEEEeC-CCcEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEE
Q psy710 95 ITYIHLPLQSKWLYVGTE-KGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAI 173 (591)
Q Consensus 95 v~~~~~~~~~~~l~~~~~-d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 173 (591)
+.++.+.++|+.+++.+. ++.+..+|. +++.+..+..... . .++...+..+
T Consensus 79 ~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~-~--------------------------~~~~~~~~~v 130 (276)
T 3no2_A 79 MQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETG-I--------------------------ERPHAQFRQI 130 (276)
T ss_dssp EEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCS-C--------------------------SSGGGSCSCC
T ss_pred ccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCC-C--------------------------CcccccccCc
Confidence 888999999999999887 777777775 5555444331100 0 0011224456
Q ss_pred EECCCCCEEEEEeCCCcEEEeCCCCeEEEEeccCCCcEEEEEEEcCCceEEEEeCCCcEEEEEccCCCcceEEeeeecc-
Q psy710 174 AFDPIQKLLAIGTKTGSLRLLGRPGVDAHVRHETDAAVIQMQFLTNEGALITATADDSLHLWNFRQKRPEIVHSLKFQR- 252 (591)
Q Consensus 174 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~- 252 (591)
++.++++++++...++.|..||.+ ++............++...++++.++++..++.|..+|..++ +.+..+..+.
T Consensus 131 ~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG--~~~w~~~~~~~ 207 (276)
T 3no2_A 131 NKNKKGNYLVPLFATSEVREIAPN-GQLLNSVKLSGTPFSSAFLDNGDCLVACGDAHCFVQLNLESN--RIVRRVNANDI 207 (276)
T ss_dssp EECTTSCEEEEETTTTEEEEECTT-SCEEEEEECSSCCCEEEECTTSCEEEECBTTSEEEEECTTTC--CEEEEEEGGGS
T ss_pred eECCCCCEEEEecCCCEEEEECCC-CCEEEEEECCCCccceeEcCCCCEEEEeCCCCeEEEEeCcCC--cEEEEecCCCC
Confidence 788999999999999999999998 555554444445667888899999998888888999999877 6777775432
Q ss_pred -----ccEEEEEecCCCCEEEEEe
Q psy710 253 -----ERITYIHLPLQSKWLYVGT 271 (591)
Q Consensus 253 -----~~v~~~~~sp~~~~l~~~~ 271 (591)
..+..++..++|+.+++..
T Consensus 208 ~~~~l~~~~~~~~~~~G~i~v~~~ 231 (276)
T 3no2_A 208 EGVQLFFVAQLFPLQNGGLYICNW 231 (276)
T ss_dssp BSCCCSEEEEEEECTTSCEEEEEE
T ss_pred CCccccccccceEcCCCCEEEEec
Confidence 2378888999999888764
No 203
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.62 E-value=1.1e-13 Score=127.69 Aligned_cols=239 Identities=9% Similarity=0.005 Sum_probs=170.2
Q ss_pred cCCEEEEecCCCeEEEEeecccCceeeeEEEeec-cceEEEEeeCCceEEEEEeCCCcEEEEEeeeeeeeceeccccccc
Q psy710 59 NEGALITATADDSLHLWNFRQKRPEIVHSLKFQR-ERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAI 137 (591)
Q Consensus 59 ~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~ 137 (591)
.++.|++++.|+.|.+||.++++ .+..+..+. ..+.++.++|+|+.++ +.++.|+.||. +++.+..+..
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~--~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~----- 73 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKE--IVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAA----- 73 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTE--EEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEEC-----
T ss_pred CCcEEEeeCCCCEEEEEECCCCe--EEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcC-----
Confidence 35789999999999999998884 677777665 4688999999999888 35678999998 7776665542
Q ss_pred ccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCCCCEEEEEeC-CCcEEEeCCCCeEEEEec-c-----CCCc
Q psy710 138 DVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTK-TGSLRLLGRPGVDAHVRH-E-----TDAA 210 (591)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~i~d~~~~~~~~~~-~-----~~~~ 210 (591)
+....+.++.+.++|+++++.+. ++.+..++..+....... . ....
T Consensus 74 ---------------------------~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~ 126 (276)
T 3no2_A 74 ---------------------------PAGCEMQTARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQ 126 (276)
T ss_dssp ---------------------------CTTCEEEEEEECTTSCEEEEEESTTEEEEEECTTSCEEEEEEECCSCSSGGGS
T ss_pred ---------------------------CCCccccccEECCCCCEEEEecCCCCEEEEEeCCCCEEEEEeccCCCCccccc
Confidence 11234678899999999999887 888888887655433221 1 1124
Q ss_pred EEEEEEEcCCceEEEEeCCCcEEEEEccCCCcceEEeeeeccccEEEEEecCCCCEEEEEeCCccEEEEEccCcccccee
Q psy710 211 VIQMQFLTNEGALITATADDSLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYI 290 (591)
Q Consensus 211 v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~ 290 (591)
...+.+.++|+++++...++.|..||.. + +.+..+... ..+..+...++|+.++++..++.|..+|..+++..-
T Consensus 127 ~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G--~~~w~~~~~-~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w-- 200 (276)
T 3no2_A 127 FRQINKNKKGNYLVPLFATSEVREIAPN-G--QLLNSVKLS-GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVR-- 200 (276)
T ss_dssp CSCCEECTTSCEEEEETTTTEEEEECTT-S--CEEEEEECS-SCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEE--
T ss_pred ccCceECCCCCEEEEecCCCEEEEECCC-C--CEEEEEECC-CCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEE--
Confidence 5566788999999999999999999987 6 577777654 445567788999999988888899999999877631
Q ss_pred eehhhhccccccC-CCCCeEEEecCCCCCCeEEEEEcC--------CEEEEEec-ccceEEEEec
Q psy710 291 INWNKAIDVCMKT-HPGPIIHLSDNPLDPSKLLLAYET--------GLVVHWDL-KLKRAEFRWQ 345 (591)
Q Consensus 291 ~~~~~~~~~~~~~-~~~~v~~~~~sp~~~~~l~~~~~d--------g~i~iwd~-~~~~~~~~~~ 345 (591)
... .....+ ....+..++..+ +++.+++.+.. +..+++++ .+++++-.+.
T Consensus 201 ---~~~-~~~~~~~~l~~~~~~~~~~-~G~i~v~~~~g~~~~~~~~~~~~~~~~~~~g~~~W~~~ 260 (276)
T 3no2_A 201 ---RVN-ANDIEGVQLFFVAQLFPLQ-NGGLYICNWQGHDREAGKGKHPQLVEIDSEGKVVWQLN 260 (276)
T ss_dssp ---EEE-GGGSBSCCCSEEEEEEECT-TSCEEEEEECTTCTTGGGSCCCSEEEECTTSBEEEEEC
T ss_pred ---Eec-CCCCCCccccccccceEcC-CCCEEEEeccCccccccccCCceEEEECCCCCEEEEec
Confidence 100 001111 223478888888 88888876521 13345555 3555555554
No 204
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.60 E-value=9.8e-13 Score=124.80 Aligned_cols=246 Identities=11% Similarity=0.006 Sum_probs=165.5
Q ss_pred ccCCcceEEEEEeecCCEEEE-------ecCCCeEEEEeecccCceeeeEEEe-----eccceEEEEeeCC-ceEEEEEe
Q psy710 45 HETDAAVIQMQFLTNEGALIT-------ATADDSLHLWNFRQKRPEIVHSLKF-----QRERITYIHLPLQ-SKWLYVGT 111 (591)
Q Consensus 45 ~~h~~~v~~l~~sp~~~~l~s-------~~~d~~i~vw~~~~~~~~~~~~~~~-----~~~~v~~~~~~~~-~~~l~~~~ 111 (591)
...-....+++|+++++.+++ ...++.|.+||..+++. ..+.. +...+..++++++ ++++++.
T Consensus 14 ~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~---~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~- 89 (314)
T 1pjx_A 14 TEDIPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKK---TVICKPEVNGYGGIPAGCQCDRDANQLFVAD- 89 (314)
T ss_dssp ECCCTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCE---EEEECCEETTEECCEEEEEECSSSSEEEEEE-
T ss_pred hccCCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcE---EEEEecccCCCCCCCceEEEecCCCcEEEEE-
Confidence 334456789999999987777 56789999999877752 22222 4467899999999 7655544
Q ss_pred CCCcEEEEEeeeeeeece-ecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCCCCEEEEEeCC--
Q psy710 112 EKGNIHVVNIESFTLSGY-IINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTKT-- 188 (591)
Q Consensus 112 ~d~~i~vwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-- 188 (591)
..+.|.+||.. ++.... ..... ......+.+++++++++++++...+
T Consensus 90 ~~~~l~~~d~~-g~~~~~~~~~~~-----------------------------~~~~~~~~~i~~d~~g~l~v~~~~~~~ 139 (314)
T 1pjx_A 90 MRLGLLVVQTD-GTFEEIAKKDSE-----------------------------GRRMQGCNDCAFDYEGNLWITAPAGEV 139 (314)
T ss_dssp TTTEEEEEETT-SCEEECCSBCTT-----------------------------SCBCBCCCEEEECTTSCEEEEECBCBC
T ss_pred CCCCEEEEeCC-CCEEEEEeccCC-----------------------------CccccCCcCEEECCCCCEEEEecCccc
Confidence 44578889887 554322 11000 0012346899999999877766554
Q ss_pred -------------CcEEEeCCCCeEEEEeccCCCcEEEEEEE----cCCceEEEE-eCCCcEEEEEcc-CCCcc---eEE
Q psy710 189 -------------GSLRLLGRPGVDAHVRHETDAAVIQMQFL----TNEGALITA-TADDSLHLWNFR-QKRPE---IVH 246 (591)
Q Consensus 189 -------------g~i~i~d~~~~~~~~~~~~~~~v~~~~~~----~~~~~l~~~-~~d~~i~~wd~~-~~~~~---~~~ 246 (591)
+.|..++.. .+.............++++ |+++.|+.+ ..++.|.+||.. .+... ...
T Consensus 140 ~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~ 218 (314)
T 1pjx_A 140 APADYTRSMQEKFGSIYCFTTD-GQMIQVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWG 218 (314)
T ss_dssp TTSCCCBTTSSSCEEEEEECTT-SCEEEEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEE
T ss_pred ccccccccccCCCCeEEEECCC-CCEEEeccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEE
Confidence 578888876 3333222222356889999 999766555 567899999986 33111 222
Q ss_pred eeeecc-ccEEEEEecCCCCEEEEEeCCccEEEEEccCccccceeeehhhhccccccCCCCCeEEEecCCCCCCeEEEEE
Q psy710 247 SLKFQR-ERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKLLLAY 325 (591)
Q Consensus 247 ~~~~~~-~~v~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~ 325 (591)
.+..+. ..+..++++++|++.++...++.|.+||..+++... .+..+...+.+++|+| +++.|++++
T Consensus 219 ~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~-----------~~~~~~~~~~~i~~~~-dg~~l~v~~ 286 (314)
T 1pjx_A 219 HIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKM-----------RIRCPFEKPSNLHFKP-QTKTIFVTE 286 (314)
T ss_dssp ECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSE-----------EEECSSSCEEEEEECT-TSSEEEEEE
T ss_pred ECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCCCcEeE-----------EEeCCCCCceeEEECC-CCCEEEEEe
Confidence 333333 567889999999888777778899999988655421 2333456789999999 998665554
Q ss_pred -cCCEEEEEeccc
Q psy710 326 -ETGLVVHWDLKL 337 (591)
Q Consensus 326 -~dg~i~iwd~~~ 337 (591)
.++.|..|++..
T Consensus 287 ~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 287 HENNAVWKFEWQR 299 (314)
T ss_dssp TTTTEEEEEECSS
T ss_pred CCCCeEEEEeCCC
Confidence 567899998865
No 205
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.60 E-value=2.5e-13 Score=131.38 Aligned_cols=290 Identities=10% Similarity=0.022 Sum_probs=194.6
Q ss_pred ecCCEEEEecC-C----CeEEEEeecccCceeeeEEEeeccceEEEEeeCCceEEEEEe----------CCCcEEEEEee
Q psy710 58 TNEGALITATA-D----DSLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGT----------EKGNIHVVNIE 122 (591)
Q Consensus 58 p~~~~l~s~~~-d----~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~d~~i~vwd~~ 122 (591)
++++.++.... + +.|.++|..+. +.+..+.....+ .++++||+++++++. .++.|.++|..
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~--~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~ 157 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTG--RILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPV 157 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTT--EEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTT
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCC--EEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECC
Confidence 46666665544 2 69999999988 467777766555 899999999998886 36789999999
Q ss_pred eeeeeceeccc-ccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCCCCEEEEEeC--CCcEEEeCCCCe
Q psy710 123 SFTLSGYIINW-NKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTK--TGSLRLLGRPGV 199 (591)
Q Consensus 123 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~i~d~~~~ 199 (591)
+++.+..+... ... ......+..++|+||+++++++.. ++.|.++|..+.
T Consensus 158 t~~vv~~I~v~g~~r---------------------------~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~ 210 (426)
T 3c75_H 158 TFLPIADIELPDAPR---------------------------FLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGK 210 (426)
T ss_dssp TCCEEEEEEETTCCC---------------------------CCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTT
T ss_pred CCcEEEEEECCCccc---------------------------cccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCC
Confidence 98877665411 000 000123567899999999998874 578999999998
Q ss_pred EEEEeccCCCcEEEEEEEcCC-ceEEEEeCCCcEEEEEccCCCcceEEe----eeeccccE-EEEEecCCCCEEEEEeCC
Q psy710 200 DAHVRHETDAAVIQMQFLTNE-GALITATADDSLHLWNFRQKRPEIVHS----LKFQRERI-TYIHLPLQSKWLYVGTEK 273 (591)
Q Consensus 200 ~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~~wd~~~~~~~~~~~----~~~~~~~v-~~~~~sp~~~~l~~~~~d 273 (591)
+......-... ....|++ ..+++.+.||.+.+.+..++ +.... +.....++ ..+.+++++..++..+..
T Consensus 211 kvv~~I~v~g~---~~~~p~g~~~~v~~~~dG~~~~V~~~~~--~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~ 285 (426)
T 3c75_H 211 TFDRMLDVPDC---YHIFPASPTVFYMNCRDGSLARVDFADG--ETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYT 285 (426)
T ss_dssp EEEEEEECCSE---EEEEEEETTEEEEEETTSSEEEEECCTT--CCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTT
T ss_pred eEEEEEEcCCc---eeeccCCCcEEEEEcCCCCEEEEECCCC--cEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCC
Confidence 87654433221 2333443 45566777888888888544 22211 11111221 234678898888878888
Q ss_pred ccEEEEEccCccccceeeehhhh--ccccccCCCCCeEEEecCCCCCCeEEEEEc----------CCEEEEEecccceEE
Q psy710 274 GNIHVVNIESFTLSGYIINWNKA--IDVCMKTHPGPIIHLSDNPLDPSKLLLAYE----------TGLVVHWDLKLKRAE 341 (591)
Q Consensus 274 g~i~i~d~~~~~~~~~~~~~~~~--~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~----------dg~i~iwd~~~~~~~ 341 (591)
+.+.+.|.......- ...+... ..............++++| +++++++... ++.|.+.|+.+.+.+
T Consensus 286 g~V~ViD~~~~~~~v-~~~~~~~~~~~i~~g~~p~g~~~va~s~-dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv 363 (426)
T 3c75_H 286 GKIFQADLTAEGATF-RAPIEALTEAERADDWRPGGWQQTAYHR-QSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERI 363 (426)
T ss_dssp SEEEEEEECSSCEEE-CCCEESSCTTTGGGTEEECSSSCEEEEG-GGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEE
T ss_pred CcEEEEeccCCceEE-eeeeeeccccccccccccCCceeeEEcC-CCCEEEEEecccccccccCCCCEEEEEECCCCeEE
Confidence 999999987544310 0000000 0000000111122368899 8887777642 357999999999999
Q ss_pred EEeccCCCeeEEEEeecCC-EEEEEe-cCCcEEEEecCCCCCceeee
Q psy710 342 FRWQCSEPIKSVCWHYEGK-QFLCSH-TDGTISTWAVRPLAKPVSVN 386 (591)
Q Consensus 342 ~~~~~~~~v~~~~~sp~g~-~l~s~~-~dg~i~vwd~~~~~~~~~~~ 386 (591)
..+.-......++|+|||+ +++++. .++.|.++|+. +.+.++++
T Consensus 364 ~~I~vg~~P~gia~spDg~~~lyv~n~~s~~VsVID~~-t~kvv~tI 409 (426)
T 3c75_H 364 NKIELGHEIDSINVSQDAEPLLYALSAGTQTLHIYDAA-TGEELRSV 409 (426)
T ss_dssp EEEEEEEEECEEEECCSSSCEEEEEETTTTEEEEEETT-TCCEEEEE
T ss_pred EEEECCCCcCeEEEccCCCEEEEEEcCCCCeEEEEECC-CCCEEEEe
Confidence 9887666789999999999 888887 58999999999 78888776
No 206
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.58 E-value=9.2e-14 Score=148.04 Aligned_cols=245 Identities=10% Similarity=0.082 Sum_probs=160.3
Q ss_pred CCCCCCcEEEeCCCCcEEEEEeCC-----CcEEEEcCCCceeEeeccCCcceEEEEEeecCCEEEEecCCCe--------
Q psy710 5 GFPYQPTAIAFDPIQKLLAIGTKT-----GSLRLLGRPGVDAHVRHETDAAVIQMQFLTNEGALITATADDS-------- 71 (591)
Q Consensus 5 gh~~~v~~~~~spdg~~la~g~~d-----g~i~lw~~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~~~d~~-------- 71 (591)
+|...+..++|||||++||.+..+ ..|++||+.+.+......+...+..++|+|| +.|+.++.++.
T Consensus 160 ~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~ 238 (741)
T 1yr2_A 160 DGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQA 238 (741)
T ss_dssp ---EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEEEEEESCCCEESTT-SEEEEEECCCC--------
T ss_pred CCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccCCCceeccEEEECC-CEEEEEEecCccccccccc
Confidence 344467889999999999977643 3599999985554433323333467899999 99888776554
Q ss_pred ------EEEEeecccCceeeeEEE--eeccceEEEEeeCCceEEEEEeCCC-----cEEEEEeeeeee--eceecccccc
Q psy710 72 ------LHLWNFRQKRPEIVHSLK--FQRERITYIHLPLQSKWLYVGTEKG-----NIHVVNIESFTL--SGYIINWNKA 136 (591)
Q Consensus 72 ------i~vw~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~-----~i~vwd~~~~~~--~~~~~~~~~~ 136 (591)
|.+|++.++..+....+. .+...+..+.|+|||++|+..+.++ .|++||+.++.. ...+.
T Consensus 239 ~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~----- 313 (741)
T 1yr2_A 239 LNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALI----- 313 (741)
T ss_dssp CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEE-----
T ss_pred CCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEec-----
Confidence 888888766422122222 2333588999999999988877543 899999987521 11111
Q ss_pred cccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCCCCEEEEEeCC----CcEEEeCCCCe--EEEEe-ccCCC
Q psy710 137 IDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTKT----GSLRLLGRPGV--DAHVR-HETDA 209 (591)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----g~i~i~d~~~~--~~~~~-~~~~~ 209 (591)
......... ++|+++.|+..+.+ +.|.+|++.+. ..... .....
T Consensus 314 ----------------------------~~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~ 364 (741)
T 1yr2_A 314 ----------------------------PDLKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKD 364 (741)
T ss_dssp ----------------------------CSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSS
T ss_pred ----------------------------CCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCC
Confidence 111222333 34888888887763 45999998763 33322 22334
Q ss_pred cEEEEEEEcCCceEEEEeCCCcEEEEEccCCCcceEEeeee-ccccEEEEEecCCCCEEEEEe----CCccEEEEEccCc
Q psy710 210 AVIQMQFLTNEGALITATADDSLHLWNFRQKRPEIVHSLKF-QRERITYIHLPLQSKWLYVGT----EKGNIHVVNIESF 284 (591)
Q Consensus 210 ~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~-~~~~v~~~~~sp~~~~l~~~~----~dg~i~i~d~~~~ 284 (591)
.+..+.+. ++.++++...|+..+||.+... ......+.. +...+..+.++|+++.++... ..++|++||+.++
T Consensus 365 ~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~-g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg 442 (741)
T 1yr2_A 365 NLESVGIA-GNRLFASYIHDAKSQVLAFDLD-GKPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATA 442 (741)
T ss_dssp EEEEEEEE-BTEEEEEEEETTEEEEEEEETT-SCEEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTT
T ss_pred eEEEEEEE-CCEEEEEEEECCEEEEEEEeCC-CCceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCC
Confidence 56778887 6667788888888777766521 145555654 356788999999988666332 3468999999876
Q ss_pred cc
Q psy710 285 TL 286 (591)
Q Consensus 285 ~~ 286 (591)
+.
T Consensus 443 ~~ 444 (741)
T 1yr2_A 443 KT 444 (741)
T ss_dssp EE
T ss_pred cE
Confidence 54
No 207
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.56 E-value=2.3e-13 Score=131.66 Aligned_cols=276 Identities=11% Similarity=0.017 Sum_probs=179.9
Q ss_pred CCCcEEEEEeCC-----CcEEEEcCC-CceeEeeccCCcceEEEEEeecCCEEEEec----------CCCeEEEEeeccc
Q psy710 17 PIQKLLAIGTKT-----GSLRLLGRP-GVDAHVRHETDAAVIQMQFLTNEGALITAT----------ADDSLHLWNFRQK 80 (591)
Q Consensus 17 pdg~~la~g~~d-----g~i~lw~~~-~~~~~~~~~h~~~v~~l~~sp~~~~l~s~~----------~d~~i~vw~~~~~ 80 (591)
++++.+.+.... +.|.++|.. .+.+..+.....+ .++++||+++|+.+. .++.|.++|..+.
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~ 159 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTF 159 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCC
Confidence 467766666542 689999987 5555566555556 899999999888775 3678999999988
Q ss_pred CceeeeEEEee-------ccceEEEEeeCCceEEEEEeC--CCcEEEEEeeeeeeeceecccccccccCCCCCCCceecc
Q psy710 81 RPEIVHSLKFQ-------RERITYIHLPLQSKWLYVGTE--KGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHL 151 (591)
Q Consensus 81 ~~~~~~~~~~~-------~~~v~~~~~~~~~~~l~~~~~--d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (591)
+ .+..+... ......+.|+||+++++++.. ++.|.+.|+.+++.+..+.....
T Consensus 160 ~--vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~---------------- 221 (426)
T 3c75_H 160 L--PIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDC---------------- 221 (426)
T ss_dssp C--EEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE----------------
T ss_pred c--EEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCc----------------
Confidence 5 45555432 123456899999999999874 57899999999887776551000
Q ss_pred CCCCcCcceeeeccCCCCceEEEECCCCCEEEEEeCCCcEEE-----eCCCCeEEEEeccCCCcEEEEEEEcCCceEEEE
Q psy710 152 SDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTKTGSLRL-----LGRPGVDAHVRHETDAAVIQMQFLTNEGALITA 226 (591)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i-----~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 226 (591)
...... +.-..++++++|+++++...++.+.. ++... ......+.|.++++.++..
T Consensus 222 -------~~~~p~---g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~---------~p~~~~~~~~~dg~~~~~~ 282 (426)
T 3c75_H 222 -------YHIFPA---SPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTED---------ELLINHPAFSLRSGRLVWP 282 (426)
T ss_dssp -------EEEEEE---ETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTT---------SCBCSCCEECTTTCEEEEE
T ss_pred -------eeeccC---CCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCC---------CceeeEeeecCCCCEEEEE
Confidence 000000 00123445555555444444443321 11111 0111235678888888777
Q ss_pred eCCCcEEEEEccCCCcceEEeeee----------ccccEEEEEecCCCCEEEEEeC----------CccEEEEEccCccc
Q psy710 227 TADDSLHLWNFRQKRPEIVHSLKF----------QRERITYIHLPLQSKWLYVGTE----------KGNIHVVNIESFTL 286 (591)
Q Consensus 227 ~~d~~i~~wd~~~~~~~~~~~~~~----------~~~~v~~~~~sp~~~~l~~~~~----------dg~i~i~d~~~~~~ 286 (591)
...+.+.+.|+.......+..+.. .......++++|+++.+++... ++.|.++|..+.+.
T Consensus 283 s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kv 362 (426)
T 3c75_H 283 TYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGER 362 (426)
T ss_dssp BTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCE
T ss_pred eCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeE
Confidence 888999999997653222111110 0111123689999998887653 35799999999877
Q ss_pred cceeeehhhhccccccCCCCCeEEEecCCCCCC-eEEEEE-cCCEEEEEecccceEEEEe
Q psy710 287 SGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPS-KLLLAY-ETGLVVHWDLKLKRAEFRW 344 (591)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~-~l~~~~-~dg~i~iwd~~~~~~~~~~ 344 (591)
.. .+.. ......++|+| |++ ++++.. .++.|.++|+.+++.+..+
T Consensus 363 v~-----------~I~v-g~~P~gia~sp-Dg~~~lyv~n~~s~~VsVID~~t~kvv~tI 409 (426)
T 3c75_H 363 IN-----------KIEL-GHEIDSINVSQ-DAEPLLYALSAGTQTLHIYDAATGEELRSV 409 (426)
T ss_dssp EE-----------EEEE-EEEECEEEECC-SSSCEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred EE-----------EEEC-CCCcCeEEEcc-CCCEEEEEEcCCCCeEEEEECCCCCEEEEe
Confidence 42 1111 12478899999 998 888887 5999999999999999886
No 208
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.56 E-value=1.1e-12 Score=124.47 Aligned_cols=238 Identities=11% Similarity=0.053 Sum_probs=159.7
Q ss_pred CCCcEEEeCCCCcEEEE-------EeCCCcEEEEcCCCceeEeecc-----CCcceEEEEEeec-CCEEEEecCCCeEEE
Q psy710 8 YQPTAIAFDPIQKLLAI-------GTKTGSLRLLGRPGVDAHVRHE-----TDAAVIQMQFLTN-EGALITATADDSLHL 74 (591)
Q Consensus 8 ~~v~~~~~spdg~~la~-------g~~dg~i~lw~~~~~~~~~~~~-----h~~~v~~l~~sp~-~~~l~s~~~d~~i~v 74 (591)
....+++|+++|+++++ +..++.|.+|+........+.. +...+.+++++++ ++++++.. .+.|.+
T Consensus 18 ~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~-~~~l~~ 96 (314)
T 1pjx_A 18 PGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADM-RLGLLV 96 (314)
T ss_dssp TTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEET-TTEEEE
T ss_pred CCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEEC-CCCEEE
Confidence 35689999999988887 5678899999976444444332 5567899999999 66555544 457888
Q ss_pred EeecccCceee-eEE--EeeccceEEEEeeCCceEEEEEeCC---------------CcEEEEEeeeeeeeceecccccc
Q psy710 75 WNFRQKRPEIV-HSL--KFQRERITYIHLPLQSKWLYVGTEK---------------GNIHVVNIESFTLSGYIINWNKA 136 (591)
Q Consensus 75 w~~~~~~~~~~-~~~--~~~~~~v~~~~~~~~~~~l~~~~~d---------------~~i~vwd~~~~~~~~~~~~~~~~ 136 (591)
||.+ ++.... ... ......+.++++.++++++++...+ +.|..++.. ++......
T Consensus 97 ~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~----- 169 (314)
T 1pjx_A 97 VQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDT----- 169 (314)
T ss_dssp EETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEE-----
T ss_pred EeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEecc-----
Confidence 9987 642111 100 0112357899999999877776554 456666543 32221110
Q ss_pred cccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEEC----CCCCEEEEE-eCCCcEEEeCCC-CeE-----EEEec
Q psy710 137 IDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFD----PIQKLLAIG-TKTGSLRLLGRP-GVD-----AHVRH 205 (591)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~----~~~~~l~~~-~~dg~i~i~d~~-~~~-----~~~~~ 205 (591)
....+..++++ |+++.++++ ..++.|.+|+.. ... .....
T Consensus 170 -----------------------------~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~ 220 (314)
T 1pjx_A 170 -----------------------------AFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHI 220 (314)
T ss_dssp -----------------------------EESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEEC
T ss_pred -----------------------------CCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEEC
Confidence 11235788999 999766555 467899999865 222 11111
Q ss_pred c-CC-CcEEEEEEEcCCceEEEEeCCCcEEEEEccCCCcceEEeeeeccccEEEEEecCCCCEEEEE-eCCccEEEEEcc
Q psy710 206 E-TD-AAVIQMQFLTNEGALITATADDSLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVG-TEKGNIHVVNIE 282 (591)
Q Consensus 206 ~-~~-~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~-~~dg~i~i~d~~ 282 (591)
. +. ..+..++++++|+.+++...++.|.+||..++ +.+..+..+...+.+++++|+++.|+++ ..++.|..|++.
T Consensus 221 ~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g--~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~ 298 (314)
T 1pjx_A 221 PGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGG--QPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQ 298 (314)
T ss_dssp CCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCB--SCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECS
T ss_pred CCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCCC--cEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCC
Confidence 2 11 46888999999988887777889999998855 3444455555779999999999966555 456789999987
Q ss_pred Cc
Q psy710 283 SF 284 (591)
Q Consensus 283 ~~ 284 (591)
..
T Consensus 299 ~~ 300 (314)
T 1pjx_A 299 RN 300 (314)
T ss_dssp SC
T ss_pred CC
Confidence 54
No 209
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.55 E-value=2.5e-12 Score=125.92 Aligned_cols=239 Identities=11% Similarity=0.020 Sum_probs=163.1
Q ss_pred CCCcEEEeCCCCcEEEEEeCCCcEEEEcCCCceeEeeccCCcceEEEEEeecCCEEEEecCCC--eEEEEeecccCceee
Q psy710 8 YQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGVDAHVRHETDAAVIQMQFLTNEGALITATADD--SLHLWNFRQKRPEIV 85 (591)
Q Consensus 8 ~~v~~~~~spdg~~la~g~~dg~i~lw~~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~~~d~--~i~vw~~~~~~~~~~ 85 (591)
..+..++|+++|+++++...++.|++||.++..+..+........ ++|+|+++.|+.+..++ .|.+++...+. ..
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~--~~ 207 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGW--AP 207 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTT--CE
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCc--ee
Confidence 356799999999988887778999999998655554433333334 99999999998887765 78888877653 12
Q ss_pred eEE---Ee-eccceEEEEeeCCceEEEEEeCCCcEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCccee
Q psy710 86 HSL---KF-QRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKT 161 (591)
Q Consensus 86 ~~~---~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (591)
..+ .. ....+.+++++|++..|+++..++.|+.||..++.... +.....
T Consensus 208 ~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~-~~~~~~-------------------------- 260 (409)
T 3hrp_A 208 TRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTL-IKQLEL-------------------------- 260 (409)
T ss_dssp EEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEE-EEECCC--------------------------
T ss_pred EEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEE-Eecccc--------------------------
Confidence 222 11 34567889999955556667778899999987654211 100000
Q ss_pred eeccCCC-Cce-EEEECCC-CCEEEEEeCCCcEEEeCCCCeEEEE-ecc-C------------CCcEEEEEEEcCCceEE
Q psy710 162 FRHGFPY-QPT-AIAFDPI-QKLLAIGTKTGSLRLLGRPGVDAHV-RHE-T------------DAAVIQMQFLTNEGALI 224 (591)
Q Consensus 162 ~~~~~~~-~v~-~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~-~~~-~------------~~~v~~~~~~~~~~~l~ 224 (591)
.+... .+. .++|+|+ +.++++-..++.|+.|+........ ... . -.....++++++|++++
T Consensus 261 --~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyv 338 (409)
T 3hrp_A 261 --SGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGECEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYI 338 (409)
T ss_dssp --CSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCCEEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEE
T ss_pred --cCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCCEEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEE
Confidence 01111 123 9999995 6666666678899999987653222 111 0 13478999999999777
Q ss_pred EEe-CCCcEEEEEccCCCcceEEeeeec---------------cccEEEEEecCCCCEEEEEeCCccEEEEEc
Q psy710 225 TAT-ADDSLHLWNFRQKRPEIVHSLKFQ---------------RERITYIHLPLQSKWLYVGTEKGNIHVVNI 281 (591)
Q Consensus 225 ~~~-~d~~i~~wd~~~~~~~~~~~~~~~---------------~~~v~~~~~sp~~~~l~~~~~dg~i~i~d~ 281 (591)
+-. .++.|+.|++.++ .+..+.++ -.....+++++++.++++-..+++|+.+++
T Consensus 339 ad~~~~~~I~~~~~~~G---~v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 339 VDGFKGYCLRKLDILDG---YVSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp EETTTTCEEEEEETTTT---EEEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred EeCCCCCEEEEEECCCC---EEEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 766 7889999997666 34444443 245889999999887777777888888775
No 210
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.50 E-value=4.1e-11 Score=112.35 Aligned_cols=228 Identities=9% Similarity=0.016 Sum_probs=153.1
Q ss_pred ceEEEEeeCCc-eEEEEEeCCCcEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceE
Q psy710 94 RITYIHLPLQS-KWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTA 172 (591)
Q Consensus 94 ~v~~~~~~~~~-~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 172 (591)
-..+..|++++ .++++...++.|+.||..+++... + .....+.+
T Consensus 14 ~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~~-~----------------------------------~~~~~~~~ 58 (297)
T 3g4e_A 14 CGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQR-V----------------------------------TMDAPVSS 58 (297)
T ss_dssp BEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEE-E----------------------------------ECSSCEEE
T ss_pred cccCCeEECCCCEEEEEECCCCEEEEEECCCCcEEE-E----------------------------------eCCCceEE
Confidence 34578899854 455555568899999988754311 1 12355789
Q ss_pred EEECCCCCEEEEEeCCCcEEEeCCCCeEEEEecc-----CCCcEEEEEEEcCCceEEEEeCC---------CcEEEEEcc
Q psy710 173 IAFDPIQKLLAIGTKTGSLRLLGRPGVDAHVRHE-----TDAAVIQMQFLTNEGALITATAD---------DSLHLWNFR 238 (591)
Q Consensus 173 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-----~~~~v~~~~~~~~~~~l~~~~~d---------~~i~~wd~~ 238 (591)
+++++++++++ +. ++.|.+||..+.+...... ....+..++++|+|+++++...+ ..-.+|.+.
T Consensus 59 i~~~~dG~l~v-~~-~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d 136 (297)
T 3g4e_A 59 VALRQSGGYVA-TI-GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLF 136 (297)
T ss_dssp EEEBTTSSEEE-EE-TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEEC
T ss_pred EEECCCCCEEE-EE-CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEE
Confidence 99999999544 44 5679999987765543221 13458899999999966654321 334566655
Q ss_pred CCCcceEEeeeeccccEEEEEecCCCCEEEE-EeCCccEEEEEc--cCccccceeeehhhhccccccCCCCCeEEEecCC
Q psy710 239 QKRPEIVHSLKFQRERITYIHLPLQSKWLYV-GTEKGNIHVVNI--ESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNP 315 (591)
Q Consensus 239 ~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~-~~~dg~i~i~d~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp 315 (591)
... +. ..+.........++|+|+++.+++ .+.++.|.+|++ .++....... ...+..+.+....+++.+
T Consensus 137 ~~g-~~-~~~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~------~~~~~~~~~~p~g~~~d~ 208 (297)
T 3g4e_A 137 PDH-HV-KKYFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRS------VYKLEKEEQIPDGMCIDA 208 (297)
T ss_dssp TTS-CE-EEEEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEE------EEECCGGGCEEEEEEEBT
T ss_pred CCC-CE-EEEeeccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEE------EEECCCCCCCCCeeEECC
Confidence 331 22 223333355789999999987754 455778999997 3444321110 112223345678899999
Q ss_pred CCCCeEEEEEcCCEEEEEecccceEEEEec-cCCCeeEEEEe-ecCCEEEEEec
Q psy710 316 LDPSKLLLAYETGLVVHWDLKLKRAEFRWQ-CSEPIKSVCWH-YEGKQFLCSHT 367 (591)
Q Consensus 316 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~s-p~g~~l~s~~~ 367 (591)
++++.++....+.|..||..++++...+. +...+++++|. |+++.|..++.
T Consensus 209 -~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~~~~t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 209 -EGKLWVACYNGGRVIRLDPVTGKRLQTVKLPVDKTTSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp -TSCEEEEEETTTEEEEECTTTCCEEEEEECSSSBEEEEEEESGGGCEEEEEEB
T ss_pred -CCCEEEEEcCCCEEEEEcCCCceEEEEEECCCCCceEEEEeCCCCCEEEEEcC
Confidence 99888777788899999999888887776 44689999998 88887766554
No 211
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.50 E-value=9.7e-12 Score=121.73 Aligned_cols=249 Identities=8% Similarity=-0.031 Sum_probs=159.6
Q ss_pred cceEEEEEeecCCEEEEecCCCeEEEEeecccCceeeeEEEeeccceEEEEeeCCceEEEEEeCCC--cEEEEEeeeeee
Q psy710 49 AAVIQMQFLTNEGALITATADDSLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEKG--NIHVVNIESFTL 126 (591)
Q Consensus 49 ~~v~~l~~sp~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--~i~vwd~~~~~~ 126 (591)
.....++|+++++++++...++.|++||.+++. +..+........ ++|+++++.|+++..++ .|.+++...+..
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~---~~~~~~~~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~ 206 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNK---VTTVHPGFKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWA 206 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTE---EEEEEETCCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTC
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCE---EEEeeccCCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCce
Confidence 467899999999877777778999999998763 333332233344 99999999999888766 677777665322
Q ss_pred eceecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCCCCEEEEEeCCCcEEEeCCCCeEEEEe--
Q psy710 127 SGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGVDAHVR-- 204 (591)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~-- 204 (591)
...+. .........+.+++++|++..|+++..++.|+.||..+......
T Consensus 207 ~~~~g-----------------------------~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~ 257 (409)
T 3hrp_A 207 PTRIG-----------------------------QLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQ 257 (409)
T ss_dssp EEEEE-----------------------------ECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEE
T ss_pred eEEee-----------------------------eccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEec
Confidence 11110 00001234568899999555566677788999999876654332
Q ss_pred --ccCCC-c--EEEEEEEcC-CceEEEEeCCCcEEEEEccCCCcceEEeeeecc---------------ccEEEEEecCC
Q psy710 205 --HETDA-A--VIQMQFLTN-EGALITATADDSLHLWNFRQKRPEIVHSLKFQR---------------ERITYIHLPLQ 263 (591)
Q Consensus 205 --~~~~~-~--v~~~~~~~~-~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~---------------~~v~~~~~sp~ 263 (591)
..... . ...++|+|+ +.++++-..++.|+.|+.... +..+.++. .....++++|+
T Consensus 258 ~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~----~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~d 333 (409)
T 3hrp_A 258 LELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGE----CEWFCGSATQKTVQDGLREEALFAQPNGMTVDED 333 (409)
T ss_dssp CCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCC----EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTT
T ss_pred ccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCC----EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCC
Confidence 11111 1 239999995 555555566788999987643 22332321 34789999999
Q ss_pred CCEEEEEe-CCccEEEEEccCccccceeeehhhhc---cccccCCCCCeEEEecCCCCCCeEEEEEcCCEEEEEec
Q psy710 264 SKWLYVGT-EKGNIHVVNIESFTLSGYIINWNKAI---DVCMKTHPGPIIHLSDNPLDPSKLLLAYETGLVVHWDL 335 (591)
Q Consensus 264 ~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~~---~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~iwd~ 335 (591)
|+++++-. .++.|+.|++.++......-.....- .......-.....+++++ ++.++++-..++.|+.+++
T Consensus 334 G~lyvad~~~~~~I~~~~~~~G~v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~-~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 334 GNFYIVDGFKGYCLRKLDILDGYVSTVAGQVDVASQIDGTPLEATFNYPYDICYDG-EGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp CCEEEEETTTTCEEEEEETTTTEEEEEEECTTCBSCCCBSTTTCCBSSEEEEEECS-SSEEEEEESTTCEEEEEEE
T ss_pred CCEEEEeCCCCCEEEEEECCCCEEEEEeCCCCCCCcCCCChhceEeCCceEEEEcC-CCCEEEEECCCCeEEEEEe
Confidence 99777766 78899999977765431100000000 000001124688999999 8777777777888887765
No 212
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.46 E-value=1.7e-11 Score=115.50 Aligned_cols=243 Identities=9% Similarity=0.011 Sum_probs=158.9
Q ss_pred CceeEeeccCCcceEEEEEeecCC-EEEEecCCCeEEEEeecccCceeeeEEEeeccceEEEEeeCCceEEEEEeCCCcE
Q psy710 38 GVDAHVRHETDAAVIQMQFLTNEG-ALITATADDSLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNI 116 (591)
Q Consensus 38 ~~~~~~~~~h~~~v~~l~~sp~~~-~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i 116 (591)
+..+..+..+......+.|+|+++ ++++...++.|..|+. +++ ...+..+...+..++++++|+++++...++.|
T Consensus 34 ~~~~~~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~---~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v 109 (305)
T 3dr2_A 34 DARLLTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGT---VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAI 109 (305)
T ss_dssp TCCCEEEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSC---EEEEEESCSCEEEEEECTTSCEEEEETTTTEE
T ss_pred CCceEEEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCC---EEEEeCCCCccceeeECCCCCEEEEECCCCEE
Confidence 455666666667788999999998 5566667899999987 343 34555566778999999999966665556789
Q ss_pred EEEEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCCCCEEEE----EeC-----
Q psy710 117 HVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAI----GTK----- 187 (591)
Q Consensus 117 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~----~~~----- 187 (591)
.+|+.. ++......... ......++.++++++|++.++ |..
T Consensus 110 ~~~~~~-g~~~~~~~~~~-----------------------------~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~ 159 (305)
T 3dr2_A 110 TRSDAD-GQAHLLVGRYA-----------------------------GKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQG 159 (305)
T ss_dssp EEECTT-SCEEEEECEET-----------------------------TEECSCCCCEEECTTSCEEEECCSGGGSCGGGS
T ss_pred EEECCC-CCEEEEEeccC-----------------------------CCccCCCCCEEECCCCCEEEeCcCCCccccccc
Confidence 999875 44322111000 001234678999999997775 332
Q ss_pred --------CCcEEEeCCCCeEEEEeccCCCcEEEEEEEcCCceEEEEeCC------CcEEEEEccCCCcceEEee-eecc
Q psy710 188 --------TGSLRLLGRPGVDAHVRHETDAAVIQMQFLTNEGALITATAD------DSLHLWNFRQKRPEIVHSL-KFQR 252 (591)
Q Consensus 188 --------dg~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d------~~i~~wd~~~~~~~~~~~~-~~~~ 252 (591)
.+.|+.+|..+++..... .......++|+|+++.|+.+... +.|.+|++..........+ ....
T Consensus 160 ~~~~~~~~~~~v~~~d~~~g~~~~~~-~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~ 238 (305)
T 3dr2_A 160 CPADPELAHHSVYRLPPDGSPLQRMA-DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPD 238 (305)
T ss_dssp CCCCCSSSCEEEEEECSSSCCCEEEE-EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSS
T ss_pred cccccccCCCeEEEEcCCCCcEEEEe-cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCC
Confidence 356888887655443322 33467889999999988877665 6899999876420011111 1122
Q ss_pred ccEEEEEecCCCCEEEEEeCCccEEEEEccCccccceeeehhhhccccccCCCCCeEEEecCCCCCCeEEEEEcCCEEE
Q psy710 253 ERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKLLLAYETGLVV 331 (591)
Q Consensus 253 ~~v~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~ 331 (591)
.....++++++|+ |++++.++ |.+|+....... .+..+. .+.+++|+| +++.|+.++.++..+
T Consensus 239 ~~pdgi~~d~~G~-lwv~~~~g-v~~~~~~g~~~~------------~~~~~~-~~~~~~f~~-d~~~L~it~~~~l~~ 301 (305)
T 3dr2_A 239 GLPDGFCVDRGGW-LWSSSGTG-VCVFDSDGQLLG------------HIPTPG-TASNCTFDQ-AQQRLFITGGPCLWM 301 (305)
T ss_dssp SCCCSEEECTTSC-EEECCSSE-EEEECTTSCEEE------------EEECSS-CCCEEEECT-TSCEEEEEETTEEEE
T ss_pred CCCCeEEECCCCC-EEEecCCc-EEEECCCCCEEE------------EEECCC-ceeEEEEeC-CCCEEEEEcCCeEEE
Confidence 3455788999999 55555554 999998543221 122222 478899998 998888888765443
No 213
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.46 E-value=6.7e-12 Score=120.36 Aligned_cols=276 Identities=8% Similarity=-0.006 Sum_probs=172.9
Q ss_pred cceEEEEEeecCCEEEEec--CCCeEEEEeecccCceeeeEE-------EeeccceEEEEeeCCceEEEEEeC-----CC
Q psy710 49 AAVIQMQFLTNEGALITAT--ADDSLHLWNFRQKRPEIVHSL-------KFQRERITYIHLPLQSKWLYVGTE-----KG 114 (591)
Q Consensus 49 ~~v~~l~~sp~~~~l~s~~--~d~~i~vw~~~~~~~~~~~~~-------~~~~~~v~~~~~~~~~~~l~~~~~-----d~ 114 (591)
.....++++|+|+.+++.. .++.++||.+.++ . +..+ ..+...+..++++++++++++-.. +.
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g--~-~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~ 93 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQD--G-LIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVP 93 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETT--E-EEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCC
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCC--C-eecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCC
Confidence 6789999999999888864 2343677777633 2 2222 123467899999999886665543 57
Q ss_pred cEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCCCCEE-EEEe---CCCc
Q psy710 115 NIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLL-AIGT---KTGS 190 (591)
Q Consensus 115 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~---~dg~ 190 (591)
.|.+||+.+++....+...... ......+..+++++++..+ ++.. .++.
T Consensus 94 ~i~~~d~~tg~~~~~~~~~~~~---------------------------~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~ 146 (343)
T 2qe8_A 94 KLVAWDTLNNQLSRVIYLPPPI---------------------------TLSNSFVNDLAVDLIHNFVYISDPAPDDKAA 146 (343)
T ss_dssp EEEEEETTTTEEEEEEECCTTT---------------------------SCTTCCCCEEEEETTTTEEEEEECCSGGGCE
T ss_pred eEEEEECCCCeEEEEEECChhh---------------------------cccccccceEEEecCCCEEEEEcCccCCCCe
Confidence 8999999988765554311100 0122346899999865444 4444 5789
Q ss_pred EEEeCCCCeEEEEeccC-CCc-EEEEEEEcCCceEEEEeCCCcEEEEEccCCCcceEEeeeeccccEEEEEecCCCCEEE
Q psy710 191 LRLLGRPGVDAHVRHET-DAA-VIQMQFLTNEGALITATADDSLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWLY 268 (591)
Q Consensus 191 i~i~d~~~~~~~~~~~~-~~~-v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~ 268 (591)
|.+||..+.+....... ... .....+.++|..+.+.+.++.++.|. ..+..++++|+++.|+
T Consensus 147 i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~----------------~~~~gia~s~dg~~ly 210 (343)
T 2qe8_A 147 LIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPH----------------LGVNGIVLDAENEWLY 210 (343)
T ss_dssp EEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCC----------------CCEEEEEECTTSCEEE
T ss_pred EEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceecee----------------cccceeEeccCCCEEE
Confidence 99999987665543321 000 00144556777777777777765442 2356799999999998
Q ss_pred EEeCCc-cEEEEEccCccccceeeehhhhccc--cccCCCCCeEEEecCCCCCCeEEEEEcCCEEEEEecccceEEEEec
Q psy710 269 VGTEKG-NIHVVNIESFTLSGYIINWNKAIDV--CMKTHPGPIIHLSDNPLDPSKLLLAYETGLVVHWDLKLKRAEFRWQ 345 (591)
Q Consensus 269 ~~~~dg-~i~i~d~~~~~~~~~~~~~~~~~~~--~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 345 (591)
++..++ .+..++... .....+. ...... ...++.+....+++++ +++++++...++.|.+||..+++......
T Consensus 211 ~~~~~~~~l~~~~~~~--~~~~~~~-~~~~~~~~~~~g~~g~pdgia~d~-~G~l~va~~~~~~V~~~d~~~G~~~~~~~ 286 (343)
T 2qe8_A 211 LSPMHSTSMYRIKSAD--LSNLQLT-DAELGSKIERYSEKPICDGISIDK-DHNIYVGDLAHSAIGVITSADRAYKLLVT 286 (343)
T ss_dssp EEESSCSEEEEEEHHH--HTCTTCC-HHHHHTTCEEEEECCSCSCEEECT-TCCEEEEEGGGTEEEEEETTTTEEEEEEE
T ss_pred EEeCCCCeEEEEEHHH--hcCCCCC-hhhhhcceEecccCCCCceEEECC-CCCEEEEccCCCeEEEEECCCCCEEEEEE
Confidence 887766 444444321 1000000 000000 1112334566799999 99888888889999999995566544443
Q ss_pred --cCCCeeEEEEeecCCEEEEEecCCcEEEE
Q psy710 346 --CSEPIKSVCWHYEGKQFLCSHTDGTISTW 374 (591)
Q Consensus 346 --~~~~v~~~~~sp~g~~l~s~~~dg~i~vw 374 (591)
....+.+++|.++++++++.+..+.+.+|
T Consensus 287 ~~~~~~p~~va~~~~g~l~v~~~~~~~~~~f 317 (343)
T 2qe8_A 287 DEKLSWTDSFNFGSDGYLYFDCNQLHHSAPL 317 (343)
T ss_dssp CGGGSCEEEEEECTTSCEEEEECCGGGSGGG
T ss_pred CCceecCCeeEECCCCcEEEEeCcccccccc
Confidence 24568899999998888777655444333
No 214
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.45 E-value=6.5e-11 Score=110.95 Aligned_cols=233 Identities=9% Similarity=0.012 Sum_probs=153.2
Q ss_pred cCCcceEEEEEeecCC-EEEEecCCCeEEEEeecccCceeeeEEEeeccceEEEEeeCCceEEEEEeCCCcEEEEEeeee
Q psy710 46 ETDAAVIQMQFLTNEG-ALITATADDSLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESF 124 (591)
Q Consensus 46 ~h~~~v~~l~~sp~~~-~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~ 124 (591)
.+..--.+..|+|+++ ++++...++.|..||..+++ ...+ .....+.+++++++++++++ . ++.|.+||..++
T Consensus 10 ~~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~---~~~~-~~~~~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~g 83 (297)
T 3g4e_A 10 ENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQ---VQRV-TMDAPVSSVALRQSGGYVAT-I-GTKFCALNWKEQ 83 (297)
T ss_dssp CCCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCC---EEEE-ECSSCEEEEEEBTTSSEEEE-E-TTEEEEEETTTT
T ss_pred cCCccccCCeEECCCCEEEEEECCCCEEEEEECCCCc---EEEE-eCCCceEEEEECCCCCEEEE-E-CCeEEEEECCCC
Confidence 3444566889999655 45566668999999998774 2222 24567899999999995544 4 568999998876
Q ss_pred eeeceecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCCCCEEEEEeC-----------CCcEEE
Q psy710 125 TLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTK-----------TGSLRL 193 (591)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-----------dg~i~i 193 (591)
+.......... .....++.++++|+|+++++... .+.|+.
T Consensus 84 ~~~~~~~~~~~-----------------------------~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~ 134 (297)
T 3g4e_A 84 SAVVLATVDND-----------------------------KKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYS 134 (297)
T ss_dssp EEEEEEECCTT-----------------------------CSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEE
T ss_pred cEEEEEecCCC-----------------------------CCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEE
Confidence 64332211000 01233688999999996664422 245666
Q ss_pred eCCCCeEEEEeccCCCcEEEEEEEcCCceEEEE-eCCCcEEEEEcc--CCCc---ceEEeeeeccccEEEEEecCCCCEE
Q psy710 194 LGRPGVDAHVRHETDAAVIQMQFLTNEGALITA-TADDSLHLWNFR--QKRP---EIVHSLKFQRERITYIHLPLQSKWL 267 (591)
Q Consensus 194 ~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~~wd~~--~~~~---~~~~~~~~~~~~v~~~~~sp~~~~l 267 (591)
++.... ...........+.++|+|+++.|+.+ +.++.|.+|++. ++.. +....+..+......++++++|++.
T Consensus 135 ~d~~g~-~~~~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lw 213 (297)
T 3g4e_A 135 LFPDHH-VKKYFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLW 213 (297)
T ss_dssp ECTTSC-EEEEEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEE
T ss_pred EECCCC-EEEEeeccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEE
Confidence 665432 22222223367889999999877554 557889999984 3321 1122233334568899999999877
Q ss_pred EEEeCCccEEEEEccCccccceeeehhhhccccccCCCCCeEEEecC-CCCCCeEEEEEc
Q psy710 268 YVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDN-PLDPSKLLLAYE 326 (591)
Q Consensus 268 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s-p~~~~~l~~~~~ 326 (591)
++...++.|..||..+++... .+..+...+++++|. | +++.|++++.
T Consensus 214 va~~~~~~v~~~d~~tG~~~~-----------~i~~p~~~~t~~~f~g~-d~~~L~vt~~ 261 (297)
T 3g4e_A 214 VACYNGGRVIRLDPVTGKRLQ-----------TVKLPVDKTTSCCFGGK-NYSEMYVTCA 261 (297)
T ss_dssp EEEETTTEEEEECTTTCCEEE-----------EEECSSSBEEEEEEESG-GGCEEEEEEB
T ss_pred EEEcCCCEEEEEcCCCceEEE-----------EEECCCCCceEEEEeCC-CCCEEEEEcC
Confidence 776777889999998776632 334445679999998 8 8887766554
No 215
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.45 E-value=6.3e-12 Score=132.54 Aligned_cols=251 Identities=12% Similarity=0.114 Sum_probs=159.9
Q ss_pred cCCcceEEEEEeecCCEEEEe-----cCCCeEEEEeecccCceeeeEEEeeccceEEEEeeCCceEEEEEeCCCc-----
Q psy710 46 ETDAAVIQMQFLTNEGALITA-----TADDSLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEKGN----- 115 (591)
Q Consensus 46 ~h~~~v~~l~~sp~~~~l~s~-----~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~----- 115 (591)
+|...+..++|||||++||.+ +.+..|++||+++++. ....+.. .....++|+ |++.|+.++.+..
T Consensus 126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~-~~~~~~~--~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~ 201 (693)
T 3iuj_A 126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQP-LETPLKD--VKFSGISWL-GNEGFFYSSYDKPDGSEL 201 (693)
T ss_dssp TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSE-EEEEEEE--EESCCCEEE-TTTEEEEEESSCCC----
T ss_pred CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCC-CccccCC--ceeccEEEe-CCCEEEEEEecCcccccc
Confidence 355678899999999998843 3346899999999862 1112221 113568899 9999998887743
Q ss_pred --------EEEEEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCcceeee-cc-CCCCceEEEECCCCCEEEEE
Q psy710 116 --------IHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFR-HG-FPYQPTAIAFDPIQKLLAIG 185 (591)
Q Consensus 116 --------i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~v~~~~~~~~~~~l~~~ 185 (591)
|++|++.+.+....+ .+. .. +......+.|+||+++|+..
T Consensus 202 ~~~~~~~~v~~~~lgt~~~~~~~------------------------------v~~~~~~~~~~~~~~~~SpDg~~l~~~ 251 (693)
T 3iuj_A 202 SARTDQHKVYFHRLGTAQEDDRL------------------------------VFGAIPAQHHRYVGATVTEDDRFLLIS 251 (693)
T ss_dssp ---CCCCEEEEEETTSCGGGCEE------------------------------EESCSGGGCCSEEEEEECTTSCEEEEE
T ss_pred cccCCCcEEEEEECCCCcccceE------------------------------EEecCCCCCeEEEEEEEcCCCCEEEEE
Confidence 888887664321110 000 11 23345788999999988654
Q ss_pred eC----CCcEEEeCCCCe--EEEEeccCCCcEEEEEEEcCCceEEEEe-CC---CcEEEEEccCCCcceEEeeeeccccE
Q psy710 186 TK----TGSLRLLGRPGV--DAHVRHETDAAVIQMQFLTNEGALITAT-AD---DSLHLWNFRQKRPEIVHSLKFQRERI 255 (591)
Q Consensus 186 ~~----dg~i~i~d~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d---~~i~~wd~~~~~~~~~~~~~~~~~~v 255 (591)
.. ...|+++|+.+. +......+....... ++++++.|+..+ .+ +.|..+|+.+........+..+...+
T Consensus 252 ~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~ 330 (693)
T 3iuj_A 252 AANSTSGNRLYVKDLSQENAPLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQV 330 (693)
T ss_dssp EESSSSCCEEEEEETTSTTCCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSC
T ss_pred EccCCCCcEEEEEECCCCCCceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCE
Confidence 43 358999998654 333333333344444 666666665443 33 57889999876432234455554555
Q ss_pred EEEEecCCCCEEEEEeCCc---cEEEEEccCccccceeeehhhhccccccCCCCCeEEEecCCCCCCeEEEEEcC----C
Q psy710 256 TYIHLPLQSKWLYVGTEKG---NIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKLLLAYET----G 328 (591)
Q Consensus 256 ~~~~~sp~~~~l~~~~~dg---~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~d----g 328 (591)
. .|+++++.|+....++ .|++|++...... .......+.+..+.+++ +++.|+....+ +
T Consensus 331 ~--~~s~~g~~lv~~~~~~g~~~l~~~d~~g~~~~-----------~l~~p~~~~~~~~~~~~-d~~~l~~~~ss~~tP~ 396 (693)
T 3iuj_A 331 L--TVHSGSGYLFAEYMVDATARVEQFDYEGKRVR-----------EVALPGLGSVSGFNGKH-DDPALYFGFENYAQPP 396 (693)
T ss_dssp E--EEEEETTEEEEEEEETTEEEEEEECTTSCEEE-----------EECCSSSSEEEECCCCT-TCSCEEEEEECSSSCC
T ss_pred E--EEEEECCEEEEEEEECCeeEEEEEECCCCeeE-----------EeecCCCceEEeeecCC-CCCEEEEEecCCCCCC
Confidence 4 8888998887665443 6889988755431 11122345677888998 88877766554 8
Q ss_pred EEEEEecccceEEEEec
Q psy710 329 LVVHWDLKLKRAEFRWQ 345 (591)
Q Consensus 329 ~i~iwd~~~~~~~~~~~ 345 (591)
.++.||+.+++......
T Consensus 397 ~l~~~d~~~g~~~~l~~ 413 (693)
T 3iuj_A 397 TLYRFEPKSGAISLYRA 413 (693)
T ss_dssp EEEEECTTTCCEEEEEC
T ss_pred EEEEEECCCCeEEEEEe
Confidence 99999998887654433
No 216
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.44 E-value=3.4e-11 Score=113.40 Aligned_cols=235 Identities=9% Similarity=-0.052 Sum_probs=153.5
Q ss_pred eeEEEeeccceEEEEeeCCce-EEEEEeCCCcEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCcceeee
Q psy710 85 VHSLKFQRERITYIHLPLQSK-WLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFR 163 (591)
Q Consensus 85 ~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (591)
+..+...........|+++++ ++++...++.|..|+. +++.. .+.
T Consensus 37 ~~~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~~~-~~~-------------------------------- 82 (305)
T 3dr2_A 37 LLTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGTVD-VLL-------------------------------- 82 (305)
T ss_dssp CEEEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSCEE-EEE--------------------------------
T ss_pred eEEEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCCEE-EEe--------------------------------
Confidence 444554556677899999998 5566666889999987 33321 111
Q ss_pred ccCCCCceEEEECCCCCEEEEEeCCCcEEEeCCCCeEEEEecc--C---CCcEEEEEEEcCCceEEE----EeC------
Q psy710 164 HGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGVDAHVRHE--T---DAAVIQMQFLTNEGALIT----ATA------ 228 (591)
Q Consensus 164 ~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~--~---~~~v~~~~~~~~~~~l~~----~~~------ 228 (591)
.....+..++++++|+++++...++.|.+|+.... ...... . ...+..+++.++|+.+++ +..
T Consensus 83 -~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~g~-~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~ 160 (305)
T 3dr2_A 83 -DATAFTNGNAVDAQQRLVHCEHGRRAITRSDADGQ-AHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGC 160 (305)
T ss_dssp -ESCSCEEEEEECTTSCEEEEETTTTEEEEECTTSC-EEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSC
T ss_pred -CCCCccceeeECCCCCEEEEECCCCEEEEECCCCC-EEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCcccccccc
Confidence 12344689999999997666556688999998643 322111 1 235678999999987775 321
Q ss_pred -------CCcEEEEEccCCCcceEEeeeeccccEEEEEecCCCCEEEEEeCC------ccEEEEEccCccccceeeehhh
Q psy710 229 -------DDSLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEK------GNIHVVNIESFTLSGYIINWNK 295 (591)
Q Consensus 229 -------d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d------g~i~i~d~~~~~~~~~~~~~~~ 295 (591)
.+.|..+|..+++...+ . .......++|+||++.|+++... +.|++|++....+.....
T Consensus 161 ~~~~~~~~~~v~~~d~~~g~~~~~--~--~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~---- 232 (305)
T 3dr2_A 161 PADPELAHHSVYRLPPDGSPLQRM--A--DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRH---- 232 (305)
T ss_dssp CCCCSSSCEEEEEECSSSCCCEEE--E--EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEE----
T ss_pred ccccccCCCeEEEEcCCCCcEEEE--e--cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeE----
Confidence 24567777665532222 2 33567889999999988877665 689999987654211100
Q ss_pred hccccccCCCCCeEEEecCCCCCCeEEEEEcCCEEEEEecccceEEEEeccCCCeeEEEEeecCCEEEEEecCCcE
Q psy710 296 AIDVCMKTHPGPIIHLSDNPLDPSKLLLAYETGLVVHWDLKLKRAEFRWQCSEPIKSVCWHYEGKQFLCSHTDGTI 371 (591)
Q Consensus 296 ~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~g~~l~s~~~dg~i 371 (591)
......+....+++.+ ++++ .++..+ .|.+|+.. ++....+.....+.+++|+|+++.|..++.++..
T Consensus 233 ----~~~~~~~~pdgi~~d~-~G~l-wv~~~~-gv~~~~~~-g~~~~~~~~~~~~~~~~f~~d~~~L~it~~~~l~ 300 (305)
T 3dr2_A 233 ----FASVPDGLPDGFCVDR-GGWL-WSSSGT-GVCVFDSD-GQLLGHIPTPGTASNCTFDQAQQRLFITGGPCLW 300 (305)
T ss_dssp ----EECCSSSCCCSEEECT-TSCE-EECCSS-EEEEECTT-SCEEEEEECSSCCCEEEECTTSCEEEEEETTEEE
T ss_pred ----EEECCCCCCCeEEECC-CCCE-EEecCC-cEEEECCC-CCEEEEEECCCceeEEEEeCCCCEEEEEcCCeEE
Confidence 0111233455688999 8884 444444 59999985 5555566544579999999999888888776533
No 217
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.43 E-value=2.7e-12 Score=135.39 Aligned_cols=243 Identities=12% Similarity=0.106 Sum_probs=154.2
Q ss_pred cCCCCCCcEEEeCCCCcEEEEEe-----CCCcEEEEcCCCceeEeeccCCcceEEEEEeecCCEEEEecCCC--------
Q psy710 4 HGFPYQPTAIAFDPIQKLLAIGT-----KTGSLRLLGRPGVDAHVRHETDAAVIQMQFLTNEGALITATADD-------- 70 (591)
Q Consensus 4 ~gh~~~v~~~~~spdg~~la~g~-----~dg~i~lw~~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~~~d~-------- 70 (591)
.+|...+..++|||||++||.+. ....|++||+.+.+......+......++|+ |++.|+.++.+.
T Consensus 125 ~~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~ 203 (693)
T 3iuj_A 125 PDGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKDVKFSGISWL-GNEGFFYSSYDKPDGSELSA 203 (693)
T ss_dssp TTSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEEEESCCCEEE-TTTEEEEEESSCCC------
T ss_pred CCCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCCceeccEEEe-CCCEEEEEEecCcccccccc
Confidence 35666788899999999999543 2357999999854433322221223578999 999998887764
Q ss_pred -----eEEEEeecccCce--eeeEEEe-eccceEEEEeeCCceEEEEEeC----CCcEEEEEeeeee-eeceeccccccc
Q psy710 71 -----SLHLWNFRQKRPE--IVHSLKF-QRERITYIHLPLQSKWLYVGTE----KGNIHVVNIESFT-LSGYIINWNKAI 137 (591)
Q Consensus 71 -----~i~vw~~~~~~~~--~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~----d~~i~vwd~~~~~-~~~~~~~~~~~~ 137 (591)
.|.+|++.++..+ .+..... |...+..+.|+||+++|+.... ++.|+++|+.++. ....+.
T Consensus 204 ~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~------ 277 (693)
T 3iuj_A 204 RTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQ------ 277 (693)
T ss_dssp -CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEE------
T ss_pred cCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEe------
Confidence 3899998766432 2333333 4445788999999998866543 2478888886642 011111
Q ss_pred ccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCCCCEEEEEeC----CCcEEEeCCCCeEE---EEeccCCCc
Q psy710 138 DVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTK----TGSLRLLGRPGVDA---HVRHETDAA 210 (591)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----dg~i~i~d~~~~~~---~~~~~~~~~ 210 (591)
.+....... ++++++.|+..+. .+.|..+++.+... .....+...
T Consensus 278 ---------------------------~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~ 329 (693)
T 3iuj_A 278 ---------------------------GDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQ 329 (693)
T ss_dssp ---------------------------CSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSS
T ss_pred ---------------------------CCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCC
Confidence 112222333 5666666555443 36788898876432 222233233
Q ss_pred EEEEEEEcCCceEEEEeCCC---cEEEEEccCCCcceEEeeee-ccccEEEEEecCCCCEEEEEeCC----ccEEEEEcc
Q psy710 211 VIQMQFLTNEGALITATADD---SLHLWNFRQKRPEIVHSLKF-QRERITYIHLPLQSKWLYVGTEK----GNIHVVNIE 282 (591)
Q Consensus 211 v~~~~~~~~~~~l~~~~~d~---~i~~wd~~~~~~~~~~~~~~-~~~~v~~~~~sp~~~~l~~~~~d----g~i~i~d~~ 282 (591)
+. .|+++++.|+....++ .|++|++..+ ....+.. ..+.+..+.++++++.++....+ +.++.||+.
T Consensus 330 ~~--~~s~~g~~lv~~~~~~g~~~l~~~d~~g~---~~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~ 404 (693)
T 3iuj_A 330 VL--TVHSGSGYLFAEYMVDATARVEQFDYEGK---RVREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPK 404 (693)
T ss_dssp CE--EEEEETTEEEEEEEETTEEEEEEECTTSC---EEEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTT
T ss_pred EE--EEEEECCEEEEEEEECCeeEEEEEECCCC---eeEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECC
Confidence 43 8899998887765544 6888888754 3344432 33567788888888877766544 789999988
Q ss_pred Cccc
Q psy710 283 SFTL 286 (591)
Q Consensus 283 ~~~~ 286 (591)
+++.
T Consensus 405 ~g~~ 408 (693)
T 3iuj_A 405 SGAI 408 (693)
T ss_dssp TCCE
T ss_pred CCeE
Confidence 7654
No 218
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.43 E-value=1.2e-10 Score=110.55 Aligned_cols=221 Identities=12% Similarity=0.040 Sum_probs=147.1
Q ss_pred cEEEeCCCC-cEEEEEeCCCcEEEEcCCCceeEeeccCCcceEEEEEeecCCEEEEecCCCeEEEEeecccCceeeeEEE
Q psy710 11 TAIAFDPIQ-KLLAIGTKTGSLRLLGRPGVDAHVRHETDAAVIQMQFLTNEGALITATADDSLHLWNFRQKRPEIVHSLK 89 (591)
Q Consensus 11 ~~~~~spdg-~~la~g~~dg~i~lw~~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~ 89 (591)
...+|+|++ .++++...++.|..|+.++.....+. ....+.+++|+|+|+++++. . ..|.+||..+++...+....
T Consensus 52 egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~-~~~~v~~i~~~~dg~l~v~~-~-~gl~~~d~~~g~~~~~~~~~ 128 (326)
T 2ghs_A 52 EGPTFDPASGTAWWFNILERELHELHLASGRKTVHA-LPFMGSALAKISDSKQLIAS-D-DGLFLRDTATGVLTLHAELE 128 (326)
T ss_dssp EEEEEETTTTEEEEEEGGGTEEEEEETTTTEEEEEE-CSSCEEEEEEEETTEEEEEE-T-TEEEEEETTTCCEEEEECSS
T ss_pred cCCeEeCCCCEEEEEECCCCEEEEEECCCCcEEEEE-CCCcceEEEEeCCCeEEEEE-C-CCEEEEECCCCcEEEEeeCC
Confidence 578999974 56666667889999998865555443 35679999999999877765 3 45889998877522221111
Q ss_pred --eeccceEEEEeeCCceEEEEEeC------CCcEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCccee
Q psy710 90 --FQRERITYIHLPLQSKWLYVGTE------KGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKT 161 (591)
Q Consensus 90 --~~~~~v~~~~~~~~~~~l~~~~~------d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (591)
.....+..++++|+|+++++... .+.|..++ +++......
T Consensus 129 ~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~------------------------------ 176 (326)
T 2ghs_A 129 SDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFA------------------------------ 176 (326)
T ss_dssp TTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEE------------------------------
T ss_pred CCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeC------------------------------
Confidence 01245889999999987665432 23455554 443322111
Q ss_pred eeccCCCCceEEEECCCCCEEEEE-eCCCcEEEeCCC--Ce-E-----EEEec-cCCCcEEEEEEEcCCceEEEEeCCCc
Q psy710 162 FRHGFPYQPTAIAFDPIQKLLAIG-TKTGSLRLLGRP--GV-D-----AHVRH-ETDAAVIQMQFLTNEGALITATADDS 231 (591)
Q Consensus 162 ~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~i~d~~--~~-~-----~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~ 231 (591)
.......++|+|+++.++++ +.++.|.+|+.. ++ . ..... ........+++.++|.+.++...++.
T Consensus 177 ----~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~ 252 (326)
T 2ghs_A 177 ----DISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGA 252 (326)
T ss_dssp ----EESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTE
T ss_pred ----CCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCE
Confidence 11234789999999876555 457889999874 33 2 22221 12346778999999987777666788
Q ss_pred EEEEEccCCCcceEEeeeeccccEEEEEec-CCCCEEEEEeCC
Q psy710 232 LHLWNFRQKRPEIVHSLKFQRERITYIHLP-LQSKWLYVGTEK 273 (591)
Q Consensus 232 i~~wd~~~~~~~~~~~~~~~~~~v~~~~~s-p~~~~l~~~~~d 273 (591)
|.+||.. + +.+..+..+...+++++|+ ++++.|++++..
T Consensus 253 v~~~d~~-g--~~~~~i~~~~~~~~~~af~g~d~~~L~vt~~~ 292 (326)
T 2ghs_A 253 VDRYDTD-G--NHIARYEVPGKQTTCPAFIGPDASRLLVTSAR 292 (326)
T ss_dssp EEEECTT-C--CEEEEEECSCSBEEEEEEESTTSCEEEEEEBC
T ss_pred EEEECCC-C--CEEEEEECCCCCcEEEEEecCCCCEEEEEecC
Confidence 9999983 4 4566666666679999998 888877766544
No 219
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.42 E-value=4e-12 Score=121.22 Aligned_cols=170 Identities=9% Similarity=0.084 Sum_probs=131.3
Q ss_pred CCcEEEeCCCCcEEEEEeCCCcEEEEcCCCc-----------eeEeeccCCcceEEEEEeecCCEEEEecCCCeEEEEee
Q psy710 9 QPTAIAFDPIQKLLAIGTKTGSLRLLGRPGV-----------DAHVRHETDAAVIQMQFLTNEGALITATADDSLHLWNF 77 (591)
Q Consensus 9 ~v~~~~~spdg~~la~g~~dg~i~lw~~~~~-----------~~~~~~~h~~~v~~l~~sp~~~~l~s~~~d~~i~vw~~ 77 (591)
.++.+++++...++++|+.++ +.+|+++.. +......+.. |+.++| |+++|+++ .++.|++||+
T Consensus 39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~dv 113 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVS-TRNALYSLDL 113 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEE-ESSEEEEEES
T ss_pred cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEE-cCCcEEEEEc
Confidence 689999999999999999885 667985411 1112334666 999999 88999998 8899999999
Q ss_pred cccCceeeeEEEeeccceEEEEeeCCceEEEEEeCCCcEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCCCcC
Q psy710 78 RQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLD 157 (591)
Q Consensus 78 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (591)
.+.. .......|...+.++.+.+.. +++++.||.|.+||+.+++...
T Consensus 114 ~sl~--~~~~~~~~~~~v~~i~~~~p~--~av~~~dG~L~v~dl~~~~~~~----------------------------- 160 (388)
T 1xip_A 114 EELS--EFRTVTSFEKPVFQLKNVNNT--LVILNSVNDLSALDLRTKSTKQ----------------------------- 160 (388)
T ss_dssp SSTT--CEEEEEECSSCEEEEEECSSE--EEEEETTSEEEEEETTTCCEEE-----------------------------
T ss_pred hhhh--ccCccceeecceeeEEecCCC--EEEEECCCCEEEEEccCCcccc-----------------------------
Confidence 8764 344566777788888776543 8888999999999998755432
Q ss_pred cceeeeccCCCCceEEEECCCCCEEEEEeCCCcEEEeCCCCeEE--EE-e------c---cCCCcEEEEEEEcCCceEEE
Q psy710 158 PSKTFRHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGVDA--HV-R------H---ETDAAVIQMQFLTNEGALIT 225 (591)
Q Consensus 158 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~--~~-~------~---~~~~~v~~~~~~~~~~~l~~ 225 (591)
+...|+|++|+|+| +++|..||.+++|+....+. .. . . .+...|.++.|.+++.++++
T Consensus 161 --------~~~~Vs~v~WSpkG--~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 161 --------LAQNVTSFDVTNSQ--LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp --------EEESEEEEEECSSE--EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred --------ccCCceEEEEcCCc--eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEE
Confidence 12357999999999 78899999999998877664 21 2 1 14578999999999988775
Q ss_pred E
Q psy710 226 A 226 (591)
Q Consensus 226 ~ 226 (591)
-
T Consensus 231 y 231 (388)
T 1xip_A 231 F 231 (388)
T ss_dssp E
T ss_pred E
Confidence 3
No 220
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.42 E-value=3.6e-12 Score=121.49 Aligned_cols=170 Identities=6% Similarity=0.042 Sum_probs=132.0
Q ss_pred CceEEEECCCCCEEEEEeCCCcEEEeCCCCeE-----------EEEeccCCCcEEEEEEEcCCceEEEEeCCCcEEEEEc
Q psy710 169 QPTAIAFDPIQKLLAIGTKTGSLRLLGRPGVD-----------AHVRHETDAAVIQMQFLTNEGALITATADDSLHLWNF 237 (591)
Q Consensus 169 ~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~-----------~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~ 237 (591)
.++.+++++...++++|+.++ +.+|+++... ......... |+.++| ++++|+++ .++.|++||+
T Consensus 39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~dv 113 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVS-TRNALYSLDL 113 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEE-ESSEEEEEES
T ss_pred cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEE-cCCcEEEEEc
Confidence 579999999999999999875 5568653222 111222344 999999 88999998 7899999999
Q ss_pred cCCCcceEEeeeeccccEEEEEecCCCCEEEEEeCCccEEEEEccCccccceeeehhhhccccccCCCCCeEEEecCCCC
Q psy710 238 RQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLD 317 (591)
Q Consensus 238 ~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~ 317 (591)
++.. .......+...+..+.+.+.. +++++.||.+.+||+.++... .+...|++++||| +
T Consensus 114 ~sl~--~~~~~~~~~~~v~~i~~~~p~--~av~~~dG~L~v~dl~~~~~~---------------~~~~~Vs~v~WSp-k 173 (388)
T 1xip_A 114 EELS--EFRTVTSFEKPVFQLKNVNNT--LVILNSVNDLSALDLRTKSTK---------------QLAQNVTSFDVTN-S 173 (388)
T ss_dssp SSTT--CEEEEEECSSCEEEEEECSSE--EEEEETTSEEEEEETTTCCEE---------------EEEESEEEEEECS-S
T ss_pred hhhh--ccCccceeecceeeEEecCCC--EEEEECCCCEEEEEccCCccc---------------cccCCceEEEEcC-C
Confidence 8773 444555666778887776543 888899999999999976552 1345899999999 7
Q ss_pred CCeEEEEEcCCEEEEEecccceE--EEEe------c----cCCCeeEEEEeecCCEEEEE
Q psy710 318 PSKLLLAYETGLVVHWDLKLKRA--EFRW------Q----CSEPIKSVCWHYEGKQFLCS 365 (591)
Q Consensus 318 ~~~l~~~~~dg~i~iwd~~~~~~--~~~~------~----~~~~v~~~~~sp~g~~l~s~ 365 (591)
| ++.|..||.+++|+...+++ ...+ . |...|.++.|.+++.+|++=
T Consensus 174 G--~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y 231 (388)
T 1xip_A 174 Q--LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVF 231 (388)
T ss_dssp E--EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEE
T ss_pred c--eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEE
Confidence 7 78899999999999988886 5555 2 57889999999999888763
No 221
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.42 E-value=8e-12 Score=118.95 Aligned_cols=266 Identities=11% Similarity=-0.011 Sum_probs=172.1
Q ss_pred cEEEEcCC-CceeEeeccCCcceEEEEEeecCCEEEEec----------CCCeEEEEeecccCceeeeEEEee-------
Q psy710 30 SLRLLGRP-GVDAHVRHETDAAVIQMQFLTNEGALITAT----------ADDSLHLWNFRQKRPEIVHSLKFQ------- 91 (591)
Q Consensus 30 ~i~lw~~~-~~~~~~~~~h~~~v~~l~~sp~~~~l~s~~----------~d~~i~vw~~~~~~~~~~~~~~~~------- 91 (591)
+|.+.|.. .+.+..+.....+ .+.|+||+++++.+. .++.|.+||..+++ .+.++..+
T Consensus 47 ~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~--vv~~I~v~~~~~~~~ 122 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFL--PIADIELPDAPRFSV 122 (368)
T ss_dssp EEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCC--EEEEEEETTSCSCCB
T ss_pred eEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCC--EEEEEECCCcccccc
Confidence 78899987 5566666555556 799999999988875 37899999999985 56776543
Q ss_pred ccceEEEEeeCCceEEEEEeC--CCcEEE--EEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCcceeeeccCC
Q psy710 92 RERITYIHLPLQSKWLYVGTE--KGNIHV--VNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFP 167 (591)
Q Consensus 92 ~~~v~~~~~~~~~~~l~~~~~--d~~i~v--wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (591)
......++++|||++++++.. +..+.+ +|..+ .+.+.. .
T Consensus 123 g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v----------------------------------~ 165 (368)
T 1mda_H 123 GPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKS----------------------------------A 165 (368)
T ss_dssp SCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEEC----------------------------------S
T ss_pred CCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEEC----------------------------------C
Confidence 123567999999999999875 357888 88877 222220 0
Q ss_pred CCceEEEECCCC-CEEEEEeCCCcEEEeCCCC-----eEEEE-----eccCCCcEEEEEEEcCCceEEEEeCCCcEEEEE
Q psy710 168 YQPTAIAFDPIQ-KLLAIGTKTGSLRLLGRPG-----VDAHV-----RHETDAAVIQMQFLTNEGALITATADDSLHLWN 236 (591)
Q Consensus 168 ~~v~~~~~~~~~-~~l~~~~~dg~i~i~d~~~-----~~~~~-----~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd 236 (591)
+ +..+.|++ +.+++.+.||.+.+.+... ++... ......+. . .+++..++..+. +.+.+.|
T Consensus 166 ~---~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~---~-~~~~~~~~~vs~-~~V~viD 237 (368)
T 1mda_H 166 S---CFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAA---Q-ANYPGMLVWAVA-SSILQGD 237 (368)
T ss_dssp S---CCCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCE---E-ETTTTEEEECBS-SCCEEEE
T ss_pred C---ceEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCcc---c-cccCCEEEEEcC-CEEEEEE
Confidence 0 01112222 2233344455555555554 22211 01112233 3 677777776667 9999999
Q ss_pred ccCCCcceEEeeeec----------cccEEEEEecCCCCEEEEEeC---------CccEEEEEccCccccceeeehhhhc
Q psy710 237 FRQKRPEIVHSLKFQ----------RERITYIHLPLQSKWLYVGTE---------KGNIHVVNIESFTLSGYIINWNKAI 297 (591)
Q Consensus 237 ~~~~~~~~~~~~~~~----------~~~v~~~~~sp~~~~l~~~~~---------dg~i~i~d~~~~~~~~~~~~~~~~~ 297 (591)
......+.+..+... ......++++|+++.++++.. ++.+.++|+.+.+...
T Consensus 238 ~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~--------- 308 (368)
T 1mda_H 238 IPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSG--------- 308 (368)
T ss_dssp CCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEE---------
T ss_pred CCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEE---------
Confidence 976532333333211 011112689999998887643 2356799999987642
Q ss_pred cccccCCCCCeEEEecCCCCCCe-EEEEE-cCCEEEEEecccceEEEEeccCCCeeEEEEee
Q psy710 298 DVCMKTHPGPIIHLSDNPLDPSK-LLLAY-ETGLVVHWDLKLKRAEFRWQCSEPIKSVCWHY 357 (591)
Q Consensus 298 ~~~~~~~~~~v~~~~~sp~~~~~-l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp 357 (591)
.+... .....++|+| |+++ +++.. .++.|.++|+.+++.+..+.-......+++.+
T Consensus 309 --~i~vg-~~p~gi~~s~-Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~vg~~P~~i~~~~ 366 (368)
T 1mda_H 309 --PISNG-HDSDAIIAAQ-DGASDNYANSAGTEVLDIYDAASDQDQSSVELDKGPESLSVQN 366 (368)
T ss_dssp --CCEEE-EEECEEEECC-SSSCEEEEEETTTTEEEEEESSSCEEEEECCCCSCCCEEECCC
T ss_pred --EEECC-CCcceEEECC-CCCEEEEEccCCCCeEEEEECCCCcEEEEEECCCCCCEEEeec
Confidence 22221 2578899999 9885 55555 58999999999999999988666677777653
No 222
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.41 E-value=9.2e-12 Score=118.52 Aligned_cols=273 Identities=5% Similarity=-0.089 Sum_probs=175.4
Q ss_pred eEEEEeecccCceeeeEEEeeccceEEEEeeCCceEEEEEe----------CCCcEEEEEeeeeeeeceecccccccccC
Q psy710 71 SLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGT----------EKGNIHVVNIESFTLSGYIINWNKAIDVC 140 (591)
Q Consensus 71 ~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~d~~i~vwd~~~~~~~~~~~~~~~~~~~~ 140 (591)
+|.+.|..++ +.+.++.....+ .+.++||++.++++. .++.|.+||..+++.+..+......-
T Consensus 47 ~vsvID~~t~--~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~--- 119 (368)
T 1mda_H 47 ENWVSCAGCG--VTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPR--- 119 (368)
T ss_dssp EEEEEETTTT--EEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCS---
T ss_pred eEEEEECCCC--eEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccc---
Confidence 7889999887 467777766665 799999999999986 36889999999988877765210000
Q ss_pred CCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCCCCEEEEEeC--CCcEEE--eCCCCeEEEEeccCCCcEEEEEE
Q psy710 141 MKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTK--TGSLRL--LGRPGVDAHVRHETDAAVIQMQF 216 (591)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~i--~d~~~~~~~~~~~~~~~v~~~~~ 216 (591)
......+..++++|||++++++.. +..+.+ +|..+...+ .... . ..+
T Consensus 120 -----------------------~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~tv~~i-~v~~--~---~~~ 170 (368)
T 1mda_H 120 -----------------------FSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASDDQLT-KSAS--C---FHI 170 (368)
T ss_dssp -----------------------CCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEEEEEE-ECSS--C---CCC
T ss_pred -----------------------cccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhhceEE-ECCC--c---eEE
Confidence 000123578999999999998875 467888 999872211 1111 1 223
Q ss_pred EcCCc-eEEEEeCCCcEEEEEccC-----CCcceEE----eeeeccccEEEEEecCCCCEEEEEeCCccEEEEEccCccc
Q psy710 217 LTNEG-ALITATADDSLHLWNFRQ-----KRPEIVH----SLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTL 286 (591)
Q Consensus 217 ~~~~~-~l~~~~~d~~i~~wd~~~-----~~~~~~~----~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~ 286 (591)
.|+++ .+++.+.|+.+.+.|+.+ + +... .+.....+. . ++++..++..+. +.+.+.|+.+...
T Consensus 171 ~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~--~v~~~~t~~i~vg~~P~---~-~~~~~~~~~vs~-~~V~viD~~~~~~ 243 (368)
T 1mda_H 171 HPGAAATHYLGSCPASLAASDLAAAPAAAG--IVGAQCTGAQNCSSQAA---Q-ANYPGMLVWAVA-SSILQGDIPAAGA 243 (368)
T ss_dssp EEEETTEEECCCCTTSCEEEECCSSCCCCE--ECCCCSCTTSCBCSCCE---E-ETTTTEEEECBS-SCCEEEECCSSCC
T ss_pred ccCCCeEEEEEcCCCCEEEEECccccccCC--eEEEEeeeeeeCCCCcc---c-cccCCEEEEEcC-CEEEEEECCCCcc
Confidence 45543 445567788888888876 2 1110 111122333 3 566666666666 8999999865322
Q ss_pred cceeeehhhhc--cccccCCCCCeEEEecCCCCCCeEEEEEc---------CCEEEEEecccceEEEEeccCCCeeEEEE
Q psy710 287 SGYIINWNKAI--DVCMKTHPGPIIHLSDNPLDPSKLLLAYE---------TGLVVHWDLKLKRAEFRWQCSEPIKSVCW 355 (591)
Q Consensus 287 ~~~~~~~~~~~--~~~~~~~~~~v~~~~~sp~~~~~l~~~~~---------dg~i~iwd~~~~~~~~~~~~~~~v~~~~~ 355 (591)
.- ...+.... .............++++| ++++++.+.. ++.+.++|+.+.+.+..+.-......++|
T Consensus 244 ~v-~~~~~~~~~~~~~~~~~p~g~~~v~~s~-dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~~p~gi~~ 321 (368)
T 1mda_H 244 TM-KAAIDGNESGRKADNFRSAGFQMVAKLK-NTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGHDSDAIIA 321 (368)
T ss_dssp EE-ECCCCSSCTHHHHTTEEECSSSCEEEET-TTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEEEECEEEE
T ss_pred eE-EEEEEeccccccccccccCcceeeEEcC-CCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCCCcceEEE
Confidence 10 00000000 000000011111267999 9888887543 23566999999999988875567999999
Q ss_pred eecCC-EEEEEe-cCCcEEEEecCCCCCceeeeccc
Q psy710 356 HYEGK-QFLCSH-TDGTISTWAVRPLAKPVSVNQPH 389 (591)
Q Consensus 356 sp~g~-~l~s~~-~dg~i~vwd~~~~~~~~~~~~~~ 389 (591)
+|||+ .+++.. .++.|.++|+. +.+.++++...
T Consensus 322 s~Dg~~l~va~~~~~~~VsVID~~-t~kvv~~I~vg 356 (368)
T 1mda_H 322 AQDGASDNYANSAGTEVLDIYDAA-SDQDQSSVELD 356 (368)
T ss_dssp CCSSSCEEEEEETTTTEEEEEESS-SCEEEEECCCC
T ss_pred CCCCCEEEEEccCCCCeEEEEECC-CCcEEEEEECC
Confidence 99998 456666 59999999999 78888877654
No 223
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.41 E-value=7.5e-10 Score=105.15 Aligned_cols=224 Identities=11% Similarity=0.010 Sum_probs=146.1
Q ss_pred eEEEEeeCCc-eEEEEEeCCCcEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEE
Q psy710 95 ITYIHLPLQS-KWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAI 173 (591)
Q Consensus 95 v~~~~~~~~~-~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 173 (591)
.....|+|++ ..+++...++.|..||..+++.... . ....+.++
T Consensus 51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~-~----------------------------------~~~~v~~i 95 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILERELHELHLASGRKTVH-A----------------------------------LPFMGSAL 95 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEEEE-E----------------------------------CSSCEEEE
T ss_pred CcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEEEE-E----------------------------------CCCcceEE
Confidence 3567899974 5556666678999999877543211 1 13457899
Q ss_pred EECCCCCEEEEEeCCCcEEEeCCCCeEEEEeccC-----CCcEEEEEEEcCCceEEEEeC------CCcEEEEEccCCCc
Q psy710 174 AFDPIQKLLAIGTKTGSLRLLGRPGVDAHVRHET-----DAAVIQMQFLTNEGALITATA------DDSLHLWNFRQKRP 242 (591)
Q Consensus 174 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-----~~~v~~~~~~~~~~~l~~~~~------d~~i~~wd~~~~~~ 242 (591)
+++++++++++ +.+ .|.+||..+++....... ...+..++++|+|+++++... .+.|..++ ++
T Consensus 96 ~~~~dg~l~v~-~~~-gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g-- 169 (326)
T 2ghs_A 96 AKISDSKQLIA-SDD-GLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KG-- 169 (326)
T ss_dssp EEEETTEEEEE-ETT-EEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TT--
T ss_pred EEeCCCeEEEE-ECC-CEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CC--
Confidence 99999986665 444 499999877665433221 236889999999986665432 23455555 33
Q ss_pred ceEEeeeeccccEEEEEecCCCCEEEEE-eCCccEEEEEcc--Cc-cccceeeehhhhccccccCCCCCeEEEecCCCCC
Q psy710 243 EIVHSLKFQRERITYIHLPLQSKWLYVG-TEKGNIHVVNIE--SF-TLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDP 318 (591)
Q Consensus 243 ~~~~~~~~~~~~v~~~~~sp~~~~l~~~-~~dg~i~i~d~~--~~-~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~ 318 (591)
+ +..+..+......++|+|+++.++.+ +.++.|.+|++. ++ +...... ...+......+..+++.+ ++
T Consensus 170 ~-~~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~------~~~~~~~~~~p~gi~~d~-~G 241 (326)
T 2ghs_A 170 K-VTKLFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEV------FIDSTGIKGGMDGSVCDA-EG 241 (326)
T ss_dssp E-EEEEEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEE------EEECTTSSSEEEEEEECT-TS
T ss_pred c-EEEeeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceE------EEECCCCCCCCCeeEECC-CC
Confidence 2 22333333457789999999877655 456889999986 44 3321000 111222345567899999 88
Q ss_pred CeEEEEEcCCEEEEEecccceEEEEec-cCCCeeEEEEe-ecCCEEEEEecC
Q psy710 319 SKLLLAYETGLVVHWDLKLKRAEFRWQ-CSEPIKSVCWH-YEGKQFLCSHTD 368 (591)
Q Consensus 319 ~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~s-p~g~~l~s~~~d 368 (591)
++.++...++.|.+||. +++....+. +...+++++|+ |+++.|+.++..
T Consensus 242 ~lwva~~~~~~v~~~d~-~g~~~~~i~~~~~~~~~~af~g~d~~~L~vt~~~ 292 (326)
T 2ghs_A 242 HIWNARWGEGAVDRYDT-DGNHIARYEVPGKQTTCPAFIGPDASRLLVTSAR 292 (326)
T ss_dssp CEEEEEETTTEEEEECT-TCCEEEEEECSCSBEEEEEEESTTSCEEEEEEBC
T ss_pred CEEEEEeCCCEEEEECC-CCCEEEEEECCCCCcEEEEEecCCCCEEEEEecC
Confidence 87777767789999998 455555554 45579999998 888877655433
No 224
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.37 E-value=5.9e-10 Score=108.46 Aligned_cols=301 Identities=11% Similarity=0.122 Sum_probs=183.5
Q ss_pred CCcEEEEEeCCCcEEEEcCC-CceeEeeccC---------CcceEEEEEeecCCEEEEecCCCeEEEEeecccCceeeeE
Q psy710 18 IQKLLAIGTKTGSLRLLGRP-GVDAHVRHET---------DAAVIQMQFLTNEGALITATADDSLHLWNFRQKRPEIVHS 87 (591)
Q Consensus 18 dg~~la~g~~dg~i~lw~~~-~~~~~~~~~h---------~~~v~~l~~sp~~~~l~s~~~d~~i~vw~~~~~~~~~~~~ 87 (591)
++..+.+++.++.|..+|.+ ++.+...... ...+.+ ....++..++.++.++.|..+|.++++ .+..
T Consensus 52 ~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~v~~~~g~l~a~d~~tG~--~~W~ 128 (376)
T 3q7m_A 52 ADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSG-GVTVSGGHVYIGSEKAQVYALNTSDGT--VAWQ 128 (376)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEE-EEEEETTEEEEEETTSEEEEEETTTCC--EEEE
T ss_pred ECCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCccccc-CceEeCCEEEEEcCCCEEEEEECCCCC--EEEE
Confidence 35677788888999999986 5555444332 122322 222345678888889999999999885 3444
Q ss_pred EEeeccceEEEEeeCCceEEEEEeCCCcEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCcceeeeccCC
Q psy710 88 LKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFP 167 (591)
Q Consensus 88 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (591)
............. .+..+++++.++.|..+|..+++.+.......... .. .+.
T Consensus 129 ~~~~~~~~~~p~~--~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~-----------------------~~-~~~- 181 (376)
T 3q7m_A 129 TKVAGEALSRPVV--SDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSL-----------------------SL-RGE- 181 (376)
T ss_dssp EECSSCCCSCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----------------------------CCC-
T ss_pred EeCCCceEcCCEE--ECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCce-----------------------ee-cCC-
Confidence 4333221111122 24467778889999999999887765544211000 00 000
Q ss_pred CCceEEEECCCCCEEEEEeCCCcEEEeCCCCeEEEEeccCCCc-----------E-EEEEEEcCCceEEEEeCCCcEEEE
Q psy710 168 YQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGVDAHVRHETDAA-----------V-IQMQFLTNEGALITATADDSLHLW 235 (591)
Q Consensus 168 ~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~-----------v-~~~~~~~~~~~l~~~~~d~~i~~w 235 (591)
...... +..+++++.++.+..+|..+++.........+ + ..... .+..++.++.++.+..+
T Consensus 182 ---~~~~~~--~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~v~~~~~~g~l~~~ 254 (376)
T 3q7m_A 182 ---SAPTTA--FGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVV--VNGVVFALAYNGNLTAL 254 (376)
T ss_dssp ---CCCEEE--TTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEE--ETTEEEEECTTSCEEEE
T ss_pred ---CCcEEE--CCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEE--ECCEEEEEecCcEEEEE
Confidence 111111 34677888899999999987766543322110 1 11111 24567778888999999
Q ss_pred EccCCCcceEEeeeeccccEEEEEecCCCCEEEEEeCCccEEEEEccCccccceeeehhhhccccccCCCCCeEEEecCC
Q psy710 236 NFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNP 315 (591)
Q Consensus 236 d~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp 315 (591)
|.+++ +.+..... .....+.. ++..+++++.++.+..+|..+++.. |.. . ......+.....
T Consensus 255 d~~tG--~~~w~~~~--~~~~~~~~--~~~~l~~~~~~g~l~~~d~~tG~~~-----w~~----~-~~~~~~~~~~~~-- 316 (376)
T 3q7m_A 255 DLRSG--QIMWKREL--GSVNDFIV--DGNRIYLVDQNDRVMALTIDGGVTL-----WTQ----S-DLLHRLLTSPVL-- 316 (376)
T ss_dssp ETTTC--CEEEEECC--CCEEEEEE--ETTEEEEEETTCCEEEEETTTCCEE-----EEE----C-TTTTSCCCCCEE--
T ss_pred ECCCC--cEEeeccC--CCCCCceE--ECCEEEEEcCCCeEEEEECCCCcEE-----Eee----c-ccCCCcccCCEE--
Confidence 99988 45444432 23344444 4667888889999999999988753 110 0 001111112222
Q ss_pred CCCCeEEEEEcCCEEEEEecccceEEEEecc-CCCeeEEEEeecCCEEEEEecCCcEEEEe
Q psy710 316 LDPSKLLLAYETGLVVHWDLKLKRAEFRWQC-SEPIKSVCWHYEGKQFLCSHTDGTISTWA 375 (591)
Q Consensus 316 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-~~~v~~~~~sp~g~~l~s~~~dg~i~vwd 375 (591)
.+..|+.++.+|.++.+|..+++.+..... ...+...... .+..|+.++.+|.|+.|+
T Consensus 317 -~~~~l~v~~~~g~l~~~d~~tG~~~~~~~~~~~~~~~~~~~-~~~~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 317 -YNGNLVVGDSEGYLHWINVEDGRFVAQQKVDSSGFQTEPVA-ADGKLLIQAKDGTVYSIT 375 (376)
T ss_dssp -ETTEEEEECTTSEEEEEETTTCCEEEEEECCTTCBCSCCEE-ETTEEEEEBTTSCEEEEE
T ss_pred -ECCEEEEEeCCCeEEEEECCCCcEEEEEecCCCcceeCCEE-ECCEEEEEeCCCEEEEEe
Confidence 347888899999999999999998877663 3333322222 345778888999999887
No 225
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.36 E-value=2.2e-10 Score=119.51 Aligned_cols=324 Identities=10% Similarity=0.068 Sum_probs=192.3
Q ss_pred CcEEEEEeCCCcEEEEcCC-CceeEeeccCCc-----------ceEEEEEeecCCEEEEecCCCeEEEEeecccCceeee
Q psy710 19 QKLLAIGTKTGSLRLLGRP-GVDAHVRHETDA-----------AVIQMQFLTNEGALITATADDSLHLWNFRQKRPEIVH 86 (591)
Q Consensus 19 g~~la~g~~dg~i~lw~~~-~~~~~~~~~h~~-----------~v~~l~~sp~~~~l~s~~~d~~i~vw~~~~~~~~~~~ 86 (591)
+..|++++.++.|..+|.. ++++..+..... ....+++ ++..|+.++.|+.+..+|..+++ .+.
T Consensus 77 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~--~~~~v~v~~~dg~l~alD~~tG~--~~W 152 (677)
T 1kb0_A 77 DGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVAL--WKGKVYVGAWDGRLIALDAATGK--EVW 152 (677)
T ss_dssp TTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCC--EEE
T ss_pred CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceE--ECCEEEEEcCCCEEEEEECCCCC--EEe
Confidence 4456677778899999976 555554433211 0112232 45688888899999999999985 455
Q ss_pred EEEee-c----cceEEEEeeCCceEEEEEeC------CCcEEEEEeeeeeeeceeccccccc-ccCCCCC-CCceeccCC
Q psy710 87 SLKFQ-R----ERITYIHLPLQSKWLYVGTE------KGNIHVVNIESFTLSGYIINWNKAI-DVCMKTH-PGPIIHLSD 153 (591)
Q Consensus 87 ~~~~~-~----~~v~~~~~~~~~~~l~~~~~------d~~i~vwd~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~ 153 (591)
.+..+ . ..+.+--.- .+..+++++. ++.|+.+|..+|+.+..+....... .+...+. ......|..
T Consensus 153 ~~~~~~~~~~~~~~~~~p~v-~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~ 231 (677)
T 1kb0_A 153 HQNTFEGQKGSLTITGAPRV-FKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDP 231 (677)
T ss_dssp EEETTTTCCSSCBCCSCCEE-ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCG
T ss_pred eecCCcCcCcCcccccCcEE-ECCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccc
Confidence 55433 1 111111011 2334555443 6899999999999877665322110 0000000 000000000
Q ss_pred CCcCcceeeeccCCCCceEEEECCCCCEEEEEeCCC-------------------cEEEeCCCCeEEEEeccC-------
Q psy710 154 NPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTKTG-------------------SLRLLGRPGVDAHVRHET------- 207 (591)
Q Consensus 154 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-------------------~i~i~d~~~~~~~~~~~~------- 207 (591)
....... .+.......++++|+++++++++.++ .|..+|..+++.....+.
T Consensus 232 -~g~~~~~--~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd 308 (677)
T 1kb0_A 232 -SGKWWEA--GGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWD 308 (677)
T ss_dssp -GGCHHHH--CEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSC
T ss_pred -cCceeEe--CCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccc
Confidence 0000000 01122234688999998888887764 489999998877644221
Q ss_pred ---CCcEEEEEEEcCC---ceEEEEeCCCcEEEEEccCCCcceEEeeeecc-----------ccE---------------
Q psy710 208 ---DAAVIQMQFLTNE---GALITATADDSLHLWNFRQKRPEIVHSLKFQR-----------ERI--------------- 255 (591)
Q Consensus 208 ---~~~v~~~~~~~~~---~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~-----------~~v--------------- 255 (591)
.....-+....+| +.++.++.+|.++++|..++ +.+..+.... .++
T Consensus 309 ~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG--~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~ 386 (677)
T 1kb0_A 309 YTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNG--KFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAV 386 (677)
T ss_dssp CCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTC--CEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECS
T ss_pred cccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCC--CEeccccccccCcccccCCCCceeeccccCcCCCccEEC
Confidence 1122233344477 67889999999999999998 5554443211 011
Q ss_pred ---------EEEEecCCCCEEEEEeCC-------------------------------------------ccEEEEEccC
Q psy710 256 ---------TYIHLPLQSKWLYVGTEK-------------------------------------------GNIHVVNIES 283 (591)
Q Consensus 256 ---------~~~~~sp~~~~l~~~~~d-------------------------------------------g~i~i~d~~~ 283 (591)
..++++|++.++++...+ |.|..||+.+
T Consensus 387 P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~t 466 (677)
T 1kb0_A 387 PGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVA 466 (677)
T ss_dssp SCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTT
T ss_pred cCcccccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCC
Confidence 146788998888876432 7799999988
Q ss_pred ccccceeeehhhhccccccCCCCCeEEEecCCCCCCeEEEEEcCCEEEEEecccceEEEEeccC--CCeeEEEEeecCCE
Q psy710 284 FTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKLLLAYETGLVVHWDLKLKRAEFRWQCS--EPIKSVCWHYEGKQ 361 (591)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~--~~v~~~~~sp~g~~ 361 (591)
++.. |.. .+..++....+.. ++.+++.++.|+.+++||..+++++..+... ....-+.+.++|+.
T Consensus 467 G~~~-----W~~-------~~~~~~~~g~~~~-~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~y~~~G~~ 533 (677)
T 1kb0_A 467 QKAA-----WSV-------EHVSPWNGGTLTT-AGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAPSTYMVDGRQ 533 (677)
T ss_dssp TEEE-----EEE-------EESSSCCCCEEEE-TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEE
T ss_pred CcEE-----eec-------CCCCCCcCcceEe-CCCEEEEECCCCcEEEEECCCCceeeeeeCCCCcccCCEEEEeCCEE
Confidence 8763 111 1122233344555 7788999999999999999999999888733 23345667789875
Q ss_pred EEEE
Q psy710 362 FLCS 365 (591)
Q Consensus 362 l~s~ 365 (591)
++..
T Consensus 534 ~v~~ 537 (677)
T 1kb0_A 534 YVSV 537 (677)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5543
No 226
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.34 E-value=5.6e-11 Score=113.88 Aligned_cols=265 Identities=9% Similarity=0.013 Sum_probs=165.6
Q ss_pred CCCcEEEeCCCCcEEEEEeC--CCcEEEEcCCCceeEee-------ccCCcceEEEEEeecCCEEEEecC-----CCeEE
Q psy710 8 YQPTAIAFDPIQKLLAIGTK--TGSLRLLGRPGVDAHVR-------HETDAAVIQMQFLTNEGALITATA-----DDSLH 73 (591)
Q Consensus 8 ~~v~~~~~spdg~~la~g~~--dg~i~lw~~~~~~~~~~-------~~h~~~v~~l~~sp~~~~l~s~~~-----d~~i~ 73 (591)
..+..++++|+|+++++... ++.++||.+....+..+ ..|-..+..++|+++++++++-.. +..|.
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~ 96 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGLIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLV 96 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEEEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEEE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCeecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEE
Confidence 57889999999999888642 34355555432223322 234578999999999876665433 57899
Q ss_pred EEeecccCceeeeEEEee------ccceEEEEeeCCceEE-EEEe---CCCcEEEEEeeeeeeeceecccccccccCCCC
Q psy710 74 LWNFRQKRPEIVHSLKFQ------RERITYIHLPLQSKWL-YVGT---EKGNIHVVNIESFTLSGYIINWNKAIDVCMKT 143 (591)
Q Consensus 74 vw~~~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~l-~~~~---~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~ 143 (591)
+||+.+++ .+..+... ...+..+++++++..+ ++.. .++.|.+||+.+++..+.+..+....
T Consensus 97 ~~d~~tg~--~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~------ 168 (343)
T 2qe8_A 97 AWDTLNNQ--LSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIA------ 168 (343)
T ss_dssp EEETTTTE--EEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTS------
T ss_pred EEECCCCe--EEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCccc------
Confidence 99998774 44444432 2346889999865444 5544 57899999998876554443211000
Q ss_pred CCCceeccCCCCcCcceeeeccCCCCceEEEECCCCCEEEEEeCCCcEEEeCCCCeEEEEeccCCCcEEEEEEEcCCceE
Q psy710 144 HPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGVDAHVRHETDAAVIQMQFLTNEGAL 223 (591)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l 223 (591)
.. ...+.+++..+.+...+|.+..|. ..+..++|+|+++.|
T Consensus 169 -----------------------~~---~~~~~~~g~~~~~~~~~g~~~~~~-------------~~~~gia~s~dg~~l 209 (343)
T 2qe8_A 169 -----------------------PE---DIDLVIDGVPVQIGQPDGTVIRPH-------------LGVNGIVLDAENEWL 209 (343)
T ss_dssp -----------------------CC---SCCCEETTEECBEECTTSCEECCC-------------CCEEEEEECTTSCEE
T ss_pred -----------------------cc---ccceeECCEEEEeccCCCceecee-------------cccceeEeccCCCEE
Confidence 00 022334666666677777776553 146789999999988
Q ss_pred EEEeCCC-cEEEEEccC---CC---cceEE--eeeeccccEEEEEecCCCCEEEEEeCCccEEEEEccCccccceeeehh
Q psy710 224 ITATADD-SLHLWNFRQ---KR---PEIVH--SLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWN 294 (591)
Q Consensus 224 ~~~~~d~-~i~~wd~~~---~~---~~~~~--~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~ 294 (591)
+.+..++ .+..++... .. .+... ...++......++++++|.++++...++.|.+||..+++...
T Consensus 210 y~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~------ 283 (343)
T 2qe8_A 210 YLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKL------ 283 (343)
T ss_dssp EEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEE------
T ss_pred EEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEE------
Confidence 8887665 444444321 10 00000 111233456678999999988888888999999984554321
Q ss_pred hhccccccCCCCCeEEEecCCCCCCeEEEEEcCCEE
Q psy710 295 KAIDVCMKTHPGPIIHLSDNPLDPSKLLLAYETGLV 330 (591)
Q Consensus 295 ~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i 330 (591)
. ....+...+.+++|.+ ++.++++.+..+.+
T Consensus 284 ---~-~~~~~~~~p~~va~~~-~g~l~v~~~~~~~~ 314 (343)
T 2qe8_A 284 ---L-VTDEKLSWTDSFNFGS-DGYLYFDCNQLHHS 314 (343)
T ss_dssp ---E-EECGGGSCEEEEEECT-TSCEEEEECCGGGS
T ss_pred ---E-EECCceecCCeeEECC-CCcEEEEeCccccc
Confidence 0 1111245688999999 88877776654443
No 227
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.34 E-value=2.3e-10 Score=119.61 Aligned_cols=292 Identities=16% Similarity=0.192 Sum_probs=183.3
Q ss_pred CCEEEEecCCCeEEEEeecccCceeeeEEEeeccc----------e-EEEEeeCCceEEEEEeCCCcEEEEEeeeeeeec
Q psy710 60 EGALITATADDSLHLWNFRQKRPEIVHSLKFQRER----------I-TYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSG 128 (591)
Q Consensus 60 ~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~----------v-~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~ 128 (591)
+..|+.++.++.|.-+|..+++ .+..+...... + ..+.+ ++..+++++.|+.|..+|..+|+.+.
T Consensus 70 ~g~vyv~~~~~~v~AlD~~tG~--~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~v~v~~~dg~l~AlDa~TG~~~W 145 (689)
T 1yiq_A 70 DGVMYTTGPFSVVYALDARDGR--LIWKYDPQSDRHRAGEACCDAVNRGVAV--WKGKVYVGVLDGRLEAIDAKTGQRAW 145 (689)
T ss_dssp TTEEEEECGGGCEEEEETTTCC--EEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEE
T ss_pred CCEEEEEcCCCeEEEEECCCCc--eeEEEcCCCCccccccccccCCCCccEE--ECCEEEEEccCCEEEEEECCCCCEee
Confidence 5567777788999999999885 44444332110 0 11122 45678888889999999999998776
Q ss_pred eeccc-ccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCCCCEEEEEe------CCCcEEEeCCCCeEE
Q psy710 129 YIINW-NKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGT------KTGSLRLLGRPGVDA 201 (591)
Q Consensus 129 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~------~dg~i~i~d~~~~~~ 201 (591)
..... .... .......+ .+ .++ .++++. .+|.|+.||..+++.
T Consensus 146 ~~~~~~~~~~-------------------------~~~~~~sP-~v---~~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~ 195 (689)
T 1yiq_A 146 SVDTRADHKR-------------------------SYTITGAP-RV---VNG-KVVIGNGGAEFGVRGYVTAYDAETGKE 195 (689)
T ss_dssp EEECCSCTTS-------------------------CCBCCSCC-EE---ETT-EEEECCBCTTTCCBCEEEEEETTTCCE
T ss_pred eecCcCCCCC-------------------------CccccCCc-EE---ECC-EEEEEeCCCccCCCCEEEEEECCCCcE
Confidence 65421 0000 00001111 11 133 344443 368899999988876
Q ss_pred EEeccC---C-----------------------------CcEEEEEEEcCCceEEEEeCCCc------------------
Q psy710 202 HVRHET---D-----------------------------AAVIQMQFLTNEGALITATADDS------------------ 231 (591)
Q Consensus 202 ~~~~~~---~-----------------------------~~v~~~~~~~~~~~l~~~~~d~~------------------ 231 (591)
...... . .....++++|+...++.+..++.
T Consensus 196 ~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~ 275 (689)
T 1yiq_A 196 AWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLS 275 (689)
T ss_dssp EEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTT
T ss_pred EEEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeee
Confidence 643221 0 01125788998899999887753
Q ss_pred -EEEEEccCCCcceEEeeee--cc-------ccEEEEEecCCCC---EEEEEeCCccEEEEEccCccccceee----ehh
Q psy710 232 -LHLWNFRQKRPEIVHSLKF--QR-------ERITYIHLPLQSK---WLYVGTEKGNIHVVNIESFTLSGYII----NWN 294 (591)
Q Consensus 232 -i~~wd~~~~~~~~~~~~~~--~~-------~~v~~~~~sp~~~---~l~~~~~dg~i~i~d~~~~~~~~~~~----~~~ 294 (591)
|..+|.+++ +.+..++. |. .+........+|+ .++.++.+|.++++|..++++..... .|.
T Consensus 276 ~v~AlD~~TG--~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~ 353 (689)
T 1yiq_A 276 SIVAVNADTG--EYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWT 353 (689)
T ss_dssp EEEEEETTTC--CEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSE
T ss_pred eEEEEEccCC--ceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccc
Confidence 999999998 55555543 21 1122222223565 78899999999999999988742110 111
Q ss_pred hhcc-----------cc--ccCCCC-----------CeEEEecCCCCCCeEEEEEc------------------------
Q psy710 295 KAID-----------VC--MKTHPG-----------PIIHLSDNPLDPSKLLLAYE------------------------ 326 (591)
Q Consensus 295 ~~~~-----------~~--~~~~~~-----------~v~~~~~sp~~~~~l~~~~~------------------------ 326 (591)
..+. .. ...... .-..++++| +..++++...
T Consensus 354 ~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp-~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (689)
T 1yiq_A 354 KGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNP-DTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQL 432 (689)
T ss_dssp EEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEET-TTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCC
T ss_pred cccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECC-CCCEEEEeccccceeeeecccccccccccccccc
Confidence 0000 00 000000 112367888 7777776532
Q ss_pred ---------------------CCEEEEEecccceEEEEeccCCCeeEEEEeecCCEEEEEecCCcEEEEecCCCCCceee
Q psy710 327 ---------------------TGLVVHWDLKLKRAEFRWQCSEPIKSVCWHYEGKQFLCSHTDGTISTWAVRPLAKPVSV 385 (591)
Q Consensus 327 ---------------------dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~g~~l~s~~~dg~i~vwd~~~~~~~~~~ 385 (591)
+|.|+.||+.+++.+....+..++..-.+...+.+++.++.||.|+.||.+ +++.+-.
T Consensus 433 g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~gt~dg~l~a~D~~-tG~~lw~ 511 (689)
T 1yiq_A 433 GLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVTIFNGGTLSTAGNLVFEGSADGRVIAYAAD-TGEKLWE 511 (689)
T ss_dssp SSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETT-TCCEEEE
T ss_pred CccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCCCccCccceECCCEEEEECCCCcEEEEECC-CCcccee
Confidence 378999999999999888766666666777788899999999999999999 7888876
Q ss_pred eccc
Q psy710 386 NQPH 389 (591)
Q Consensus 386 ~~~~ 389 (591)
+...
T Consensus 512 ~~~~ 515 (689)
T 1yiq_A 512 QPAA 515 (689)
T ss_dssp EECS
T ss_pred eeCC
Confidence 6544
No 228
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.33 E-value=2.9e-10 Score=118.95 Aligned_cols=322 Identities=11% Similarity=0.076 Sum_probs=187.8
Q ss_pred CcEEEEEeCCCcEEEEcCC-CceeEeeccCCcc----------e-EEEEEeecCCEEEEecCCCeEEEEeecccCceeee
Q psy710 19 QKLLAIGTKTGSLRLLGRP-GVDAHVRHETDAA----------V-IQMQFLTNEGALITATADDSLHLWNFRQKRPEIVH 86 (591)
Q Consensus 19 g~~la~g~~dg~i~lw~~~-~~~~~~~~~h~~~----------v-~~l~~sp~~~~l~s~~~d~~i~vw~~~~~~~~~~~ 86 (591)
+..|++++.++.|..+|.. ++++..+..+... + ..++ .++..|+.++.|+.|..+|.++++ .+.
T Consensus 70 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~--~~~g~v~v~~~dg~l~AlDa~TG~--~~W 145 (689)
T 1yiq_A 70 DGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVA--VWKGKVYVGVLDGRLEAIDAKTGQ--RAW 145 (689)
T ss_dssp TTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCE--EETTEEEEECTTSEEEEEETTTCC--EEE
T ss_pred CCEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccE--EECCEEEEEccCCEEEEEECCCCC--Eee
Confidence 4567777888899999976 6666555432210 0 1122 245678888899999999999986 444
Q ss_pred EEEee--ccceEEEEeeC---CceEEEEEe-----CCCcEEEEEeeeeeeeceecccccccccCCCCCCCc---eeccCC
Q psy710 87 SLKFQ--RERITYIHLPL---QSKWLYVGT-----EKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGP---IIHLSD 153 (591)
Q Consensus 87 ~~~~~--~~~v~~~~~~~---~~~~l~~~~-----~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 153 (591)
.+... ......+..+| ++..++..+ .++.|+.||..+|+.+..+............ ...+ ...+..
T Consensus 146 ~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~-~~~~~~~~~~~~g 224 (689)
T 1yiq_A 146 SVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPE-GKGMEIAAKTWFG 224 (689)
T ss_dssp EEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCC-SHHHHHHHTTCCS
T ss_pred eecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCcccccc-cccccccccccCC
Confidence 44331 11111111122 444444322 3689999999999987765422110000000 0000 000000
Q ss_pred CCcCcceeeeccCCCCceEEEECCCCCEEEEEeCCCc-------------------EEEeCCCCeEEEEeccC-------
Q psy710 154 NPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTKTGS-------------------LRLLGRPGVDAHVRHET------- 207 (591)
Q Consensus 154 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~-------------------i~i~d~~~~~~~~~~~~------- 207 (591)
...... .+....-..++++|+.+++++++.++. |..+|..+++.......
T Consensus 225 ---~~w~~~-~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd 300 (689)
T 1yiq_A 225 ---DAYVEQ-GGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWD 300 (689)
T ss_dssp ---STHHHH-CEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSC
T ss_pred ---ceeeec-CCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCccccc
Confidence 000000 011122246789998889999888764 89999998877643321
Q ss_pred ---CCcEEEEEEEcCCc---eEEEEeCCCcEEEEEccCCCcceEEeeeecc----------------------------c
Q psy710 208 ---DAAVIQMQFLTNEG---ALITATADDSLHLWNFRQKRPEIVHSLKFQR----------------------------E 253 (591)
Q Consensus 208 ---~~~v~~~~~~~~~~---~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~----------------------------~ 253 (591)
..+........+|+ .++.++.+|.++++|.+++ +.+....... .
T Consensus 301 ~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG--~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~ 378 (689)
T 1yiq_A 301 YTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATG--ELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKR 378 (689)
T ss_dssp CCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTC--CEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSC
T ss_pred ccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCC--CEeccccccccccccccCccCCCcccchhhccccCCCCe
Confidence 11222223333665 7888999999999999988 4443221110 0
Q ss_pred c-----------EEEEEecCCCCEEEEEeC---------------------------------------------CccEE
Q psy710 254 R-----------ITYIHLPLQSKWLYVGTE---------------------------------------------KGNIH 277 (591)
Q Consensus 254 ~-----------v~~~~~sp~~~~l~~~~~---------------------------------------------dg~i~ 277 (591)
. -..++++|+..++++.+. +|.|+
T Consensus 379 ~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~ 458 (689)
T 1yiq_A 379 NLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLI 458 (689)
T ss_dssp EEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEE
T ss_pred eEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEE
Confidence 0 012678888888887632 36788
Q ss_pred EEEccCccccceeeehhhhccccccCCCCCeEEEecCCCCCCeEEEEEcCCEEEEEecccceEEEEeccCC--CeeEEEE
Q psy710 278 VVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKLLLAYETGLVVHWDLKLKRAEFRWQCSE--PIKSVCW 355 (591)
Q Consensus 278 i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~--~v~~~~~ 355 (591)
.||+.+++.. |. ...+ .+...-.+.. .+.++++++.|+.++.||.++++.+..+.... ...-+.|
T Consensus 459 A~D~~tG~~~-----W~------~~~~-~~~~~g~~~t-agglvf~gt~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~ty 525 (689)
T 1yiq_A 459 AWDPVKQQAA-----WE------VPYV-TIFNGGTLST-AGNLVFEGSADGRVIAYAADTGEKLWEQPAASGVMAAPVTY 525 (689)
T ss_dssp EEETTTTEEE-----EE------EEES-SSCCCCEEEE-TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEE
T ss_pred EEECCCCCeE-----eE------ccCC-CCccCccceE-CCCEEEEECCCCcEEEEECCCCccceeeeCCCCcccCceEE
Confidence 8999888763 11 1111 1222234445 67899999999999999999999998776332 2345777
Q ss_pred eecCCEEEE
Q psy710 356 HYEGKQFLC 364 (591)
Q Consensus 356 sp~g~~l~s 364 (591)
..+|+..++
T Consensus 526 ~~~G~qyv~ 534 (689)
T 1yiq_A 526 SVDGEQYVT 534 (689)
T ss_dssp EETTEEEEE
T ss_pred EECCEEEEE
Confidence 889875443
No 229
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.33 E-value=1.1e-10 Score=121.78 Aligned_cols=293 Identities=13% Similarity=0.142 Sum_probs=185.9
Q ss_pred CCEEEEecCCCeEEEEeecccCceeeeEEEeeccc-----------eEEEEeeCCceEEEEEeCCCcEEEEEeeeeeeec
Q psy710 60 EGALITATADDSLHLWNFRQKRPEIVHSLKFQRER-----------ITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSG 128 (591)
Q Consensus 60 ~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~-----------v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~ 128 (591)
+..|+.++.++.|.-+|..+++ .+..+...... ...+++ ++..+++++.|+.|..+|..+|+.+.
T Consensus 77 ~g~vyv~~~~~~v~AlD~~tG~--~~W~~~~~~~~~~~~~~~~~~~~~~~a~--~~~~v~v~~~dg~l~alD~~tG~~~W 152 (677)
T 1kb0_A 77 DGIMYVSASWSVVHAIDTRTGN--RIWTYDPQIDRSTGFKGCCDVVNRGVAL--WKGKVYVGAWDGRLIALDAATGKEVW 152 (677)
T ss_dssp TTEEEEECGGGCEEEEETTTTE--EEEEECCCCCGGGGGGSSSCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEE
T ss_pred CCEEEEECCCCeEEEEECCCCc--EEEEEcCCCCccccccccccCCCCCceE--ECCEEEEEcCCCEEEEEECCCCCEEe
Confidence 4567777778899999998884 44444332110 012222 46678888889999999999998776
Q ss_pred eecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCCCCEEEEEeC------CCcEEEeCCCCeEEE
Q psy710 129 YIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTK------TGSLRLLGRPGVDAH 202 (591)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~------dg~i~i~d~~~~~~~ 202 (591)
.+....... .. ......+ .. .+..+++++. +|.|+.+|..+++..
T Consensus 153 ~~~~~~~~~--------------------~~----~~~~~~p---~v--~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~ 203 (677)
T 1kb0_A 153 HQNTFEGQK--------------------GS----LTITGAP---RV--FKGKVIIGNGGAEYGVRGYITAYDAETGERK 203 (677)
T ss_dssp EEETTTTCC--------------------SS----CBCCSCC---EE--ETTEEEECCBCTTTCCBCEEEEEETTTCCEE
T ss_pred eecCCcCcC--------------------cC----cccccCc---EE--ECCEEEEEecccccCCCCEEEEEECCCCcEE
Confidence 654220000 00 0000101 11 1334555543 688999999888766
Q ss_pred EeccCCC---------------------------------cEEEEEEEcCCceEEEEeCCC-------------------
Q psy710 203 VRHETDA---------------------------------AVIQMQFLTNEGALITATADD------------------- 230 (591)
Q Consensus 203 ~~~~~~~---------------------------------~v~~~~~~~~~~~l~~~~~d~------------------- 230 (591)
....... ....++++|++..++.+..++
T Consensus 204 W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~ 283 (677)
T 1kb0_A 204 WRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLA 283 (677)
T ss_dssp EEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTT
T ss_pred EEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeE
Confidence 4332100 113578899999998887664
Q ss_pred cEEEEEccCCCcceEEeeee--cc-------ccEEEEEecCCC---CEEEEEeCCccEEEEEccCccccceee----ehh
Q psy710 231 SLHLWNFRQKRPEIVHSLKF--QR-------ERITYIHLPLQS---KWLYVGTEKGNIHVVNIESFTLSGYII----NWN 294 (591)
Q Consensus 231 ~i~~wd~~~~~~~~~~~~~~--~~-------~~v~~~~~sp~~---~~l~~~~~dg~i~i~d~~~~~~~~~~~----~~~ 294 (591)
.|..+|.+++ +.+..++. |. .....+....+| +.++.++.+|.++++|..++++.-... +|.
T Consensus 284 sv~AlD~~TG--~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~ 361 (677)
T 1kb0_A 284 SIVALDPDTG--KYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWA 361 (677)
T ss_dssp EEEEECTTTC--CEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSE
T ss_pred EEEEEECCCC--CEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcc
Confidence 4889999988 55555443 21 112222333467 688999999999999999988742111 010
Q ss_pred hhcc------------------ccccCCCC--CeEEEecCCCCCCeEEEEEc----------------------------
Q psy710 295 KAID------------------VCMKTHPG--PIIHLSDNPLDPSKLLLAYE---------------------------- 326 (591)
Q Consensus 295 ~~~~------------------~~~~~~~~--~v~~~~~sp~~~~~l~~~~~---------------------------- 326 (591)
..+. ....+..+ .-..++++| +..++++...
T Consensus 362 ~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp-~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 440 (677)
T 1kb0_A 362 SGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNP-QTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGW 440 (677)
T ss_dssp EEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEET-TTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTC
T ss_pred cccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcC-CCCEEEEeChhcceeeeccccccccccccccccccccc
Confidence 0000 00000000 012567888 7787777543
Q ss_pred ---------------CCEEEEEecccceEEEEeccCCCeeEEEEeecCCEEEEEecCCcEEEEecCCCCCceeeeccc
Q psy710 327 ---------------TGLVVHWDLKLKRAEFRWQCSEPIKSVCWHYEGKQFLCSHTDGTISTWAVRPLAKPVSVNQPH 389 (591)
Q Consensus 327 ---------------dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~g~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~ 389 (591)
.+.|..||+.+++.+..+.+..++....+..++..++.++.||.+++||.. +++.+..+...
T Consensus 441 ~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~-tG~~lw~~~~~ 517 (677)
T 1kb0_A 441 NTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHVSPWNGGTLTTAGNVVFQGTADGRLVAYHAA-TGEKLWEAPTG 517 (677)
T ss_dssp CCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETT-TCCEEEEEECS
T ss_pred ccccccccccCCCCCccEEEEEeCCCCcEEeecCCCCCCcCcceEeCCCEEEEECCCCcEEEEECC-CCceeeeeeCC
Confidence 278999999999999888877777777788888899999999999999999 88888777644
No 230
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=99.23 E-value=2.2e-07 Score=99.82 Aligned_cols=319 Identities=13% Similarity=0.122 Sum_probs=203.2
Q ss_pred CcEEEeCCCCcEEEEEeCCCcEEEEcCCCceeEee--ccCCcceEEEEEeecCCEEEEecCCCeEEEEeecccCceeeeE
Q psy710 10 PTAIAFDPIQKLLAIGTKTGSLRLLGRPGVDAHVR--HETDAAVIQMQFLTNEGALITATADDSLHLWNFRQKRPEIVHS 87 (591)
Q Consensus 10 v~~~~~spdg~~la~g~~dg~i~lw~~~~~~~~~~--~~h~~~v~~l~~sp~~~~l~s~~~d~~i~vw~~~~~~~~~~~~ 87 (591)
|.++...++|++.+ |+.++-+..|+........+ ..+...|.++...+++.+.+ ++.++-+..||..+++ ...
T Consensus 175 i~~i~~d~~g~lwi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lwi-gt~~~Gl~~~~~~~~~---~~~ 249 (795)
T 4a2l_A 175 IASTLYRQGDQIYI-GTSTDGLYTYSITQKTFEKVIPILGTKQIQAILQQSPTRIWV-ATEGAGLFLINPKTKE---IKN 249 (795)
T ss_dssp CEEEEEEETTEEEE-EESSSCEEEEETTTCCEEECC----CCCEEEEEEEETTEEEE-EEBSSCEEEEETTTTE---EEE
T ss_pred eEEEEECCCCCEEE-EECCCCEEEEeCCCCeEEEecCCCCCCeeEEEEEcCCCCEEE-EECCCCeEEEeCCCCe---EEE
Confidence 88888888887655 56554588898765444333 12346789988888876554 4444457888877653 222
Q ss_pred EEe--------eccceEEEEeeCCceEEEEEeCCCcEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCcc
Q psy710 88 LKF--------QRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPS 159 (591)
Q Consensus 88 ~~~--------~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (591)
+.. ....|.++...+++.+. .|+.+ .|.+|+..+++............
T Consensus 250 ~~~~~~~~~~l~~~~i~~i~~d~~g~lW-igt~~-Gl~~~~~~~~~~~~~~~~~~~~~---------------------- 305 (795)
T 4a2l_A 250 YLHSPSNPKSISSNYIRSLAMDSQNRLW-IGTFN-DLNIYHEGTDSFASYSSNPVENG---------------------- 305 (795)
T ss_dssp ECCCTTCTTSCSCSBEEEEEECTTSCEE-EEESS-CEEEEETTTTEEEEECCCTTSTT----------------------
T ss_pred eecCCCCccccCCCeEEEEEEcCCCCEE-EEeCC-hhheEcCCCCeEEEEecCCCCCC----------------------
Confidence 211 13568999888877654 45554 68889877655433221100000
Q ss_pred eeeeccCCCCceEEEECCCCCEEEEEeCCCcEEEeCCCCeEEEEecc-------CCCcEEEEEEEcCCceEEEEeCCCcE
Q psy710 160 KTFRHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGVDAHVRHE-------TDAAVIQMQFLTNEGALITATADDSL 232 (591)
Q Consensus 160 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-------~~~~v~~~~~~~~~~~l~~~~~d~~i 232 (591)
.-....|.++..+++|+ |.+|+.++-|..|+........... ....|.++...++|. |..|+.++-|
T Consensus 306 ----~l~~~~i~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~-lWiGt~~~Gl 379 (795)
T 4a2l_A 306 ----SLSQRSVRSIFMDSQGG-MWLGTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDKN-LWIGTNDGGL 379 (795)
T ss_dssp ----SCSSSCEEEEEECTTSC-EEEEESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECTTSC-EEEEESSSCE
T ss_pred ----CCCCCcEEEEEEeCCcC-EEEEECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECCCCC-EEEEECCCCe
Confidence 01235689999999887 6678887789999876543322111 134689998887776 5557777679
Q ss_pred EEEEccCCCcceEEeee--------eccccEEEEEecCCCCEEEEEeCCccEEEEEccCccccceeeehhhhccccccCC
Q psy710 233 HLWNFRQKRPEIVHSLK--------FQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTH 304 (591)
Q Consensus 233 ~~wd~~~~~~~~~~~~~--------~~~~~v~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~ 304 (591)
..|+..++. ...... .....|.++..+++++.|.+|+.++-+..||..+++...+... .....
T Consensus 380 ~~~~~~~~~--~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~-------~~~l~ 450 (795)
T 4a2l_A 380 NLYNPITQR--FTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQR-------NSQLV 450 (795)
T ss_dssp EEECTTTCC--EEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTT-------TSCCS
T ss_pred EEEcCCCCc--EEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecC-------CCCcC
Confidence 999987662 222111 1235689999988888677788877899999887655311000 00123
Q ss_pred CCCeEEEecCCCCCCeEEEEEcCCEEEEEecccceEEEEec-------cCCCeeEEEEeecCCEEEEEecCCcEEEEecC
Q psy710 305 PGPIIHLSDNPLDPSKLLLAYETGLVVHWDLKLKRAEFRWQ-------CSEPIKSVCWHYEGKQFLCSHTDGTISTWAVR 377 (591)
Q Consensus 305 ~~~v~~~~~sp~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-------~~~~v~~~~~sp~g~~l~s~~~dg~i~vwd~~ 377 (591)
...|.++...+ ++++.+ |+.+ -+.+||..+++...... ....|.++...++|++.+... +-|..||..
T Consensus 451 ~~~v~~i~~d~-~g~lwi-gt~~-Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~--~Gl~~~~~~ 525 (795)
T 4a2l_A 451 NENVYAILPDG-EGNLWL-GTLS-ALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE--EGLSVFKQE 525 (795)
T ss_dssp CSCEEEEEECS-SSCEEE-EESS-CEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEES--SCEEEEEEE
T ss_pred CCeeEEEEECC-CCCEEE-EecC-ceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEeC--CceEEEeCC
Confidence 45789999888 666444 4444 47889988876654432 236789999998888666554 458889987
No 231
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.22 E-value=1.1e-08 Score=99.44 Aligned_cols=269 Identities=12% Similarity=0.134 Sum_probs=168.7
Q ss_pred cCCEEEEecCCCeEEEEeecccCceeeeEEEee---------ccceEEEEeeCCceEEEEEeCCCcEEEEEeeeeeeece
Q psy710 59 NEGALITATADDSLHLWNFRQKRPEIVHSLKFQ---------RERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGY 129 (591)
Q Consensus 59 ~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~---------~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~ 129 (591)
++..++.++.++.|..+|.++++ .+...... ...+.+. ...++..+++++.++.|..+|..+++.+..
T Consensus 52 ~~~~v~~~~~~g~v~a~d~~tG~--~~W~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~ 128 (376)
T 3q7m_A 52 ADNVVYAADRAGLVKALNADDGK--EIWSVSLAEKDGWFSKEPALLSGG-VTVSGGHVYIGSEKAQVYALNTSDGTVAWQ 128 (376)
T ss_dssp ETTEEEEECTTSEEEEEETTTCC--EEEEEECCC---CCSCCCCCEEEE-EEEETTEEEEEETTSEEEEEETTTCCEEEE
T ss_pred ECCEEEEEcCCCeEEEEEccCCc--eeeeecCccccccccccCcccccC-ceEeCCEEEEEcCCCEEEEEECCCCCEEEE
Confidence 35678888888999999999886 34333331 1222221 222456777888899999999998876654
Q ss_pred ecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCCCCEEEEEeCCCcEEEeCCCCeEEEEeccCCC
Q psy710 130 IINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGVDAHVRHETDA 209 (591)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~ 209 (591)
...... .. ..... .+..+++++.++.+..+|..+++.........
T Consensus 129 ~~~~~~------------------------------~~---~~p~~--~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~ 173 (376)
T 3q7m_A 129 TKVAGE------------------------------AL---SRPVV--SDGLVLIHTSNGQLQALNEADGAVKWTVNLDM 173 (376)
T ss_dssp EECSSC------------------------------CC---SCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEECCC
T ss_pred EeCCCc------------------------------eE---cCCEE--ECCEEEEEcCCCeEEEEECCCCcEEEEEeCCC
Confidence 431100 00 01111 13468888899999999998877664443322
Q ss_pred cE------EEEEEEcCCceEEEEeCCCcEEEEEccCCCcceEEeeeecccc----EE---EEEecC--CCCEEEEEeCCc
Q psy710 210 AV------IQMQFLTNEGALITATADDSLHLWNFRQKRPEIVHSLKFQRER----IT---YIHLPL--QSKWLYVGTEKG 274 (591)
Q Consensus 210 ~v------~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~----v~---~~~~sp--~~~~l~~~~~dg 274 (591)
.+ ...... +..++++..++.+..+|..++ +.+......... +. .+...| .+..+++++.++
T Consensus 174 ~~~~~~~~~~~~~~--~~~v~~g~~~g~l~~~d~~tG--~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g 249 (376)
T 3q7m_A 174 PSLSLRGESAPTTA--FGAAVVGGDNGRVSAVLMEQG--QMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNG 249 (376)
T ss_dssp -----CCCCCCEEE--TTEEEECCTTTEEEEEETTTC--CEEEEEECCC-----------CCCCCCEEETTEEEEECTTS
T ss_pred CceeecCCCCcEEE--CCEEEEEcCCCEEEEEECCCC--cEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCc
Confidence 22 122222 346777888899999999888 454444322100 00 011112 356788888899
Q ss_pred cEEEEEccCccccceeeehhhhccccccCCCCCeEEEecCCCCCCeEEEEEcCCEEEEEecccceEEEEec-c-CCCeeE
Q psy710 275 NIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKLLLAYETGLVVHWDLKLKRAEFRWQ-C-SEPIKS 352 (591)
Q Consensus 275 ~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~-~~~v~~ 352 (591)
.+..+|..+++.. |. . .......+.. ++..++.++.++.+..+|..+++...... . ...+..
T Consensus 250 ~l~~~d~~tG~~~-----w~------~--~~~~~~~~~~---~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~ 313 (376)
T 3q7m_A 250 NLTALDLRSGQIM-----WK------R--ELGSVNDFIV---DGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTS 313 (376)
T ss_dssp CEEEEETTTCCEE-----EE------E--CCCCEEEEEE---ETTEEEEEETTCCEEEEETTTCCEEEEECTTTTSCCCC
T ss_pred EEEEEECCCCcEE-----ee------c--cCCCCCCceE---ECCEEEEEcCCCeEEEEECCCCcEEEeecccCCCcccC
Confidence 9999999988763 11 1 1122334443 45788888899999999999999876665 1 223333
Q ss_pred EEEeecCCEEEEEecCCcEEEEecCCCCCceeeecc
Q psy710 353 VCWHYEGKQFLCSHTDGTISTWAVRPLAKPVSVNQP 388 (591)
Q Consensus 353 ~~~sp~g~~l~s~~~dg~i~vwd~~~~~~~~~~~~~ 388 (591)
... .+..|+.++.+|.|+++|.. +++.+.....
T Consensus 314 ~~~--~~~~l~v~~~~g~l~~~d~~-tG~~~~~~~~ 346 (376)
T 3q7m_A 314 PVL--YNGNLVVGDSEGYLHWINVE-DGRFVAQQKV 346 (376)
T ss_dssp CEE--ETTEEEEECTTSEEEEEETT-TCCEEEEEEC
T ss_pred CEE--ECCEEEEEeCCCeEEEEECC-CCcEEEEEec
Confidence 333 35678888899999999998 6777665544
No 232
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.22 E-value=2.4e-10 Score=109.00 Aligned_cols=299 Identities=10% Similarity=0.037 Sum_probs=179.5
Q ss_pred EEEeCCCCcEEEEEeCCCcEEEEcCCCceeEeeccCCcceEEEEEeecCCEEEEecCCCeEEEEeecccCceeeeEEEee
Q psy710 12 AIAFDPIQKLLAIGTKTGSLRLLGRPGVDAHVRHETDAAVIQMQFLTNEGALITATADDSLHLWNFRQKRPEIVHSLKFQ 91 (591)
Q Consensus 12 ~~~~spdg~~la~g~~dg~i~lw~~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~ 91 (591)
+..+..+|. |.+++.++.|..||.++........+...+.++...+++. |..++.+ +..+|. +++ ....+...
T Consensus 24 ~~~~d~~g~-l~v~t~~~~l~~~d~~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~--l~~~d~-~g~--~~~~~~~~ 96 (330)
T 3hxj_A 24 SPILAKNGT-IYLGSSNKNLYAINTDGSVKWFFKSGEIIECRPSIGKDGT-IYFGSDK--VYAINP-DGT--EKWRFDTK 96 (330)
T ss_dssp CCEECTTSC-EECSSTTTTTEEECTTSCEEESSCGGGEEEECCEETTTTE-ECCSSCE--EEEECC-CGG--GGGGSCC-
T ss_pred CceEccCCe-EEEEcCCCEEEEECCCCcEEEEEecCCCcccceEEecCCc-EEEecCc--EEEECC-CCc--EEEEEECC
Confidence 445555665 5567778889999944555544444445566777766664 5555544 777875 332 22222222
Q ss_pred ccceEEEEeeCCceEEEEEeCCCcEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCce
Q psy710 92 RERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPT 171 (591)
Q Consensus 92 ~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 171 (591)
........+. +..+.+++.++.|..+|.. ++....... ....+.
T Consensus 97 ~~~~~~~~~~--~~~l~v~t~~~~l~~~d~~-g~~~~~~~~---------------------------------~~~~~~ 140 (330)
T 3hxj_A 97 KAIVSDFTIF--EDILYVTSMDGHLYAINTD-GTEKWRFKT---------------------------------KKAIYA 140 (330)
T ss_dssp ----CCEEEE--TTEEEEECTTSEEEEECTT-SCEEEEEEC---------------------------------SSCCCS
T ss_pred CCcccCceEE--CCEEEEEecCCEEEEEcCC-CCEEEEEcC---------------------------------CCceee
Confidence 2222222333 4567778888899999887 554333221 112235
Q ss_pred EEEECCCCCEEEEEeCCCcEEEeCCCCeEEEEeccCCCcEEEEEEEcCCceEEEEeCCCcEEEEEccCCCcceEEeeeec
Q psy710 172 AIAFDPIQKLLAIGTKTGSLRLLGRPGVDAHVRHETDAAVIQMQFLTNEGALITATADDSLHLWNFRQKRPEIVHSLKFQ 251 (591)
Q Consensus 172 ~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~ 251 (591)
++...+++. +.+++.++.+..+|...............+.++...+++. +..++ +.|..+| .++ +........
T Consensus 141 ~~~~~~~g~-l~vgt~~~~l~~~d~~g~~~~~~~~~~~~~~~~~~d~~g~-l~v~t--~~l~~~d-~~g--~~~~~~~~~ 213 (330)
T 3hxj_A 141 TPIVSEDGT-IYVGSNDNYLYAINPDGTEKWRFKTNDAITSAASIGKDGT-IYFGS--DKVYAIN-PDG--TEKWNFYAG 213 (330)
T ss_dssp CCEECTTSC-EEEECTTSEEEEECTTSCEEEEEECSSCCCSCCEECTTCC-EEEES--SSEEEEC-TTS--CEEEEECCS
T ss_pred eeEEcCCCE-EEEEcCCCEEEEECCCCCEeEEEecCCCceeeeEEcCCCE-EEEEe--CEEEEEC-CCC--cEEEEEccC
Confidence 556677776 6668888999999998333222222234566677766776 44445 7789999 555 455555544
Q ss_pred cccEEEEEecCCCCEEEEEeCCccEEEEEccCccccceeeehhhhccccccCCCCCeEEEecCCCCCCeEEEEEcCCEEE
Q psy710 252 RERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKLLLAYETGLVV 331 (591)
Q Consensus 252 ~~~v~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~ 331 (591)
...+.++..+++|. +++++.++.+..+|....... ........+..+.+.+ +..|..++.++.|.
T Consensus 214 ~~~~~~~~~~~~g~-l~v~t~~~gl~~~~~~g~~~~------------~~~~~~~~~~~~~~~~--~g~l~v~t~~ggl~ 278 (330)
T 3hxj_A 214 YWTVTRPAISEDGT-IYVTSLDGHLYAINPDGTEKW------------RFKTGKRIESSPVIGN--TDTIYFGSYDGHLY 278 (330)
T ss_dssp SCCCSCCEECTTSC-EEEEETTTEEEEECTTSCEEE------------EEECSSCCCSCCEECT--TSCEEEECTTCEEE
T ss_pred CcceeceEECCCCe-EEEEcCCCeEEEECCCCCEeE------------EeeCCCCccccceEcC--CCeEEEecCCCCEE
Confidence 45677888888775 566777888888875332221 1111112222344444 45677888888999
Q ss_pred EEecccceEEEEec-cCCCeeEEEEeecCCEEEEEecCCcEEEEecC
Q psy710 332 HWDLKLKRAEFRWQ-CSEPIKSVCWHYEGKQFLCSHTDGTISTWAVR 377 (591)
Q Consensus 332 iwd~~~~~~~~~~~-~~~~v~~~~~sp~g~~l~s~~~dg~i~vwd~~ 377 (591)
.+|. +++....+. ....+.++...++|+ |..++.+|.+++....
T Consensus 279 ~~d~-~g~~~~~~~~~~~~~~~~~~d~~g~-l~~gt~~G~~~~~~~~ 323 (330)
T 3hxj_A 279 AINP-DGTEKWNFETGSWIIATPVIDENGT-IYFGTRNGKFYALFNL 323 (330)
T ss_dssp EECT-TSCEEEEEECSSCCCSCCEECTTCC-EEEECTTSCEEEEEC-
T ss_pred EECC-CCcEEEEEEcCCccccceEEcCCCE-EEEEcCCCeEEEEecc
Confidence 9996 566555554 455677777777776 5567889999988776
No 233
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=99.22 E-value=8.4e-07 Score=95.24 Aligned_cols=320 Identities=11% Similarity=0.056 Sum_probs=203.0
Q ss_pred CCCCcEEEeCCCCcEEEEEeCCCcEEEEcCCCceeEeecc--------CCcceEEEEEeecCCEEEEecCCCeEEEEeec
Q psy710 7 PYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGVDAHVRHE--------TDAAVIQMQFLTNEGALITATADDSLHLWNFR 78 (591)
Q Consensus 7 ~~~v~~~~~spdg~~la~g~~dg~i~lw~~~~~~~~~~~~--------h~~~v~~l~~sp~~~~l~s~~~d~~i~vw~~~ 78 (591)
...|.++...++|.+.+ |+.++-+.+|+........+.. ....|.++...++|.+.+ |+.+ -|.+|+..
T Consensus 214 ~~~i~~i~~d~~g~lwi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~ 290 (795)
T 4a2l_A 214 TKQIQAILQQSPTRIWV-ATEGAGLFLINPKTKEIKNYLHSPSNPKSISSNYIRSLAMDSQNRLWI-GTFN-DLNIYHEG 290 (795)
T ss_dssp CCCEEEEEEEETTEEEE-EEBSSCEEEEETTTTEEEEECCCTTCTTSCSCSBEEEEEECTTSCEEE-EESS-CEEEEETT
T ss_pred CCeeEEEEEcCCCCEEE-EECCCCeEEEeCCCCeEEEeecCCCCccccCCCeEEEEEEcCCCCEEE-EeCC-hhheEcCC
Confidence 34677888888887655 4444348889977554443321 136799999888877554 4444 57888877
Q ss_pred ccCceeeeEEE--------eeccceEEEEeeCCceEEEEEeCCCcEEEEEeeeeeeeceecccccccccCCCCCCCceec
Q psy710 79 QKRPEIVHSLK--------FQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIH 150 (591)
Q Consensus 79 ~~~~~~~~~~~--------~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (591)
+++ ...+. .....|.++...++|. |..|+.++.|..++..+...........
T Consensus 291 ~~~---~~~~~~~~~~~~~l~~~~i~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~---------------- 350 (795)
T 4a2l_A 291 TDS---FASYSSNPVENGSLSQRSVRSIFMDSQGG-MWLGTYFGGLNYYHPIRNRFKNIRNIPY---------------- 350 (795)
T ss_dssp TTE---EEEECCCTTSTTSCSSSCEEEEEECTTSC-EEEEESSSCEEEECGGGGSSEEECCCTT----------------
T ss_pred CCe---EEEEecCCCCCCCCCCCcEEEEEEeCCcC-EEEEECCCCeEEeCCCcccceEEcCCCC----------------
Confidence 653 22221 1235689998888776 5567777889999876643221111000
Q ss_pred cCCCCcCcceeeeccCCCCceEEEECCCCCEEEEEeCCCcEEEeCCCCeEEEEecc---------CCCcEEEEEEEcCCc
Q psy710 151 LSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGVDAHVRHE---------TDAAVIQMQFLTNEG 221 (591)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~---------~~~~v~~~~~~~~~~ 221 (591)
.. .-....|.++..+++++ |.+|+.++-|..|+..+........ ....|.++...++++
T Consensus 351 --------~~---~l~~~~V~~i~~d~~g~-lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~ 418 (795)
T 4a2l_A 351 --------KN---SLSDNVVSCIVEDKDKN-LWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKS 418 (795)
T ss_dssp --------SS---SCSCSSEEEEEECTTSC-EEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTT
T ss_pred --------CC---CCCCCeeEEEEECCCCC-EEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCC
Confidence 00 01234588999998887 5668888789999987665443211 135789999888887
Q ss_pred eEEEEeCCCcEEEEEccCCCcceEEeee-----eccccEEEEEecCCCCEEEEEeCCccEEEEEccCccccceeeehhhh
Q psy710 222 ALITATADDSLHLWNFRQKRPEIVHSLK-----FQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKA 296 (591)
Q Consensus 222 ~l~~~~~d~~i~~wd~~~~~~~~~~~~~-----~~~~~v~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~ 296 (591)
.|..|+.++-|..||..+++ . ..+. .....|.++..+++|++. +|+. +-+.+||..+++.......
T Consensus 419 ~lWigt~~~Gl~~~d~~~~~--~-~~~~~~~~~l~~~~v~~i~~d~~g~lw-igt~-~Gl~~~~~~~~~~~~~~~~---- 489 (795)
T 4a2l_A 419 LVYIGTHAGGLSILHRNSGQ--V-ENFNQRNSQLVNENVYAILPDGEGNLW-LGTL-SALVRFNPEQRSFTTIEKE---- 489 (795)
T ss_dssp EEEEEETTTEEEEEETTTCC--E-EEECTTTSCCSCSCEEEEEECSSSCEE-EEES-SCEEEEETTTTEEEECCBC----
T ss_pred EEEEEeCcCceeEEeCCCCc--E-EEeecCCCCcCCCeeEEEEECCCCCEE-EEec-CceeEEeCCCCeEEEcccc----
Confidence 56677776779999988763 2 2222 123578999998888744 4555 4588899877654311000
Q ss_pred ccccccCCCCCeEEEecCCCCCCeEEEEEcCCEEEEEecccceEEEEe-------ccCCCeeEEEEeecCCEEEEEecCC
Q psy710 297 IDVCMKTHPGPIIHLSDNPLDPSKLLLAYETGLVVHWDLKLKRAEFRW-------QCSEPIKSVCWHYEGKQFLCSHTDG 369 (591)
Q Consensus 297 ~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-------~~~~~v~~~~~sp~g~~l~s~~~dg 369 (591)
..........|.++...+ ++++.+ |+. +-+..||..+++. ... .....|.++...++|.+.++.. .
T Consensus 490 -~~~~~~~~~~i~~i~~d~-~g~lWi-gt~-~Gl~~~~~~~~~~-~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~-~- 562 (795)
T 4a2l_A 490 -KDGTPVVSKQITTLFRDS-HKRLWI-GGE-EGLSVFKQEGLDI-QKASILPVSNVTKLFTNCIYEASNGIIWVGTR-E- 562 (795)
T ss_dssp -TTCCBCCCCCEEEEEECT-TCCEEE-EES-SCEEEEEEETTEE-EECCCSCSCGGGGSCEEEEEECTTSCEEEEES-S-
T ss_pred -ccccccCCceEEEEEECC-CCCEEE-EeC-CceEEEeCCCCeE-EEecCCCCCCCCCCeeEEEEECCCCCEEEEeC-C-
Confidence 000011246789999888 766444 444 4578899888776 322 1345788999988888665543 4
Q ss_pred cEEEEecC
Q psy710 370 TISTWAVR 377 (591)
Q Consensus 370 ~i~vwd~~ 377 (591)
-|..||..
T Consensus 563 Gl~~~d~~ 570 (795)
T 4a2l_A 563 GFYCFNEK 570 (795)
T ss_dssp CEEEEETT
T ss_pred CceeECCC
Confidence 47888877
No 234
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.21 E-value=2.3e-08 Score=95.42 Aligned_cols=235 Identities=13% Similarity=0.171 Sum_probs=149.8
Q ss_pred CCceEEEEEe-CCCcEEEEEeeee----eeeceecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEEC
Q psy710 102 LQSKWLYVGT-EKGNIHVVNIESF----TLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFD 176 (591)
Q Consensus 102 ~~~~~l~~~~-~d~~i~vwd~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 176 (591)
++.++|++.+ .++.|+++|+.+. +..+++.... ... +.+ ......+...
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~-----------------------~~~--~~g-~s~Ph~~~~~ 146 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEE-----------------------VKK--VSG-YSRLHTVHCG 146 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHH-----------------------HHH--HHC-EEEEEEEEEC
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhh-----------------------ccc--ccC-CCcccceeEC
Confidence 7777777655 4789999999764 3333331000 000 001 1134677888
Q ss_pred CCCCEEEEEeCC------CcEEEeCCCCeEEEEeccCC----CcEEEEEEEcCCceEEEEe-------------------
Q psy710 177 PIQKLLAIGTKT------GSLRLLGRPGVDAHVRHETD----AAVIQMQFLTNEGALITAT------------------- 227 (591)
Q Consensus 177 ~~~~~l~~~~~d------g~i~i~d~~~~~~~~~~~~~----~~v~~~~~~~~~~~l~~~~------------------- 227 (591)
|+| +++++..+ |.|.++|..+.+........ .--..+.|+|+++.+++..
T Consensus 147 pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~ 225 (462)
T 2ece_A 147 PDA-IYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDR 225 (462)
T ss_dssp SSC-EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHH
T ss_pred CCe-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhc
Confidence 999 66655544 78999999988877554421 2234588899999888874
Q ss_pred CCCcEEEEEccCCCcceEEeeeec-c-ccEEEEE--ecCCCCEEEEEeC------CccEEEEEccCcccccee-eehhh-
Q psy710 228 ADDSLHLWNFRQKRPEIVHSLKFQ-R-ERITYIH--LPLQSKWLYVGTE------KGNIHVVNIESFTLSGYI-INWNK- 295 (591)
Q Consensus 228 ~d~~i~~wd~~~~~~~~~~~~~~~-~-~~v~~~~--~sp~~~~l~~~~~------dg~i~i~d~~~~~~~~~~-~~~~~- 295 (591)
...+|.+||+.++ +.+.++... . .....+. |+|++++++++++ +++|.+|..+.++..... +....
T Consensus 226 ~~d~V~v~D~~~~--k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~ 303 (462)
T 2ece_A 226 YGNRIHFWDLRKR--KRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAE 303 (462)
T ss_dssp SCCEEEEEETTTT--EEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCE
T ss_pred cCCEEEEEECCCC--cEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCc
Confidence 3688999999987 666666552 1 2344454 4999999988874 568888776654322111 10000
Q ss_pred hccccc-------cCCCCCeEEEecCCCCCCeEEEEEc-CCEEEEEeccc---ceEEEEeccCC---------------C
Q psy710 296 AIDVCM-------KTHPGPIIHLSDNPLDPSKLLLAYE-TGLVVHWDLKL---KRAEFRWQCSE---------------P 349 (591)
Q Consensus 296 ~~~~~~-------~~~~~~v~~~~~sp~~~~~l~~~~~-dg~i~iwd~~~---~~~~~~~~~~~---------------~ 349 (591)
.....+ .+-......+.+|| |+++|+++.. .+.|.+||+.. .+++..+.-.+ .
T Consensus 304 ~v~~~lp~~~~~f~~~~~~pa~I~lS~-DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~gg 382 (462)
T 2ece_A 304 PLEGNLPEILKPFKAVPPLVTDIDISL-DDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGA 382 (462)
T ss_dssp ECCSSCCGGGGGGTEECCCCCCEEECT-TSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSC
T ss_pred cccccccccccccccCCCceeEEEECC-CCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCC
Confidence 000000 01124577899999 9999988765 78999999863 34444443221 3
Q ss_pred eeEEEEeecCCEEEEEe
Q psy710 350 IKSVCWHYEGKQFLCSH 366 (591)
Q Consensus 350 v~~~~~sp~g~~l~s~~ 366 (591)
...++++|||++|+++.
T Consensus 383 Pr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 383 PQMLEISRDGRRVYVTN 399 (462)
T ss_dssp CCCEEECTTSSEEEEEC
T ss_pred CCEEEEcCCCCEEEEEc
Confidence 68899999999999887
No 235
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.15 E-value=2.1e-08 Score=99.29 Aligned_cols=243 Identities=7% Similarity=0.031 Sum_probs=158.0
Q ss_pred CCceEEEEEeC-CCcEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEE-C-CC
Q psy710 102 LQSKWLYVGTE-KGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAF-D-PI 178 (591)
Q Consensus 102 ~~~~~l~~~~~-d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~-~~ 178 (591)
+||+++++... ++.|.+.|+.++++.+.+.- .....+..+++ + |+
T Consensus 99 ~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~i--------------------------------p~g~~phg~~~~~~p~ 146 (595)
T 1fwx_A 99 YDGRFLFMNDKANTRVARVRCDVMKCDAILEI--------------------------------PNAKGIHGLRPQKWPR 146 (595)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTTEEEEEEEC--------------------------------SSCCSEEEEEECCSSB
T ss_pred cCCCEEEEEcCCCCEEEEEECCCceEeeEEeC--------------------------------CCCCCCcceeeeecCC
Confidence 38888888776 55799999999887775431 11234678887 5 89
Q ss_pred CCEEEEEeC------------------CCcEEEeCCCCeEEEEeccCCCcEEEEEEEcCCceEEEEeCCC----------
Q psy710 179 QKLLAIGTK------------------TGSLRLLGRPGVDAHVRHETDAAVIQMQFLTNEGALITATADD---------- 230 (591)
Q Consensus 179 ~~~l~~~~~------------------dg~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~---------- 230 (591)
++++++++. ++.+.+.|..+.+......-......++++|+|+++++.+.+.
T Consensus 147 ~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~~qI~Vgg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~ 226 (595)
T 1fwx_A 147 SNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEVAWQVLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMT 226 (595)
T ss_dssp CSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHT
T ss_pred CcEEEEecccccccCCCCcccccccccCceEEEEECCCCeEEEEEEeCCCccceEECCCCCEEEEEecCcccCcchhhcc
Confidence 999988852 4568888988877765443322456788999999998887553
Q ss_pred ----------------------------cEEEEEccCCCcce-EEeeeeccccEEEEEecCCCCEEEEEe-CCccEEEEE
Q psy710 231 ----------------------------SLHLWNFRQKRPEI-VHSLKFQRERITYIHLPLQSKWLYVGT-EKGNIHVVN 280 (591)
Q Consensus 231 ----------------------------~i~~wd~~~~~~~~-~~~~~~~~~~v~~~~~sp~~~~l~~~~-~dg~i~i~d 280 (591)
.|.+.|.++.+.+. +..+... ....++.++|||+++++++ .+.+|.++|
T Consensus 227 ~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipvg-~~PhGv~~sPDGk~v~V~~~~s~~VsVid 305 (595)
T 1fwx_A 227 AAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPIA-NNPHGCNMAPDKKHLCVAGKLSPTVTVLD 305 (595)
T ss_dssp CCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEEEE-SSCCCEEECTTSSEEEEECTTSSBEEEEE
T ss_pred ccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCceeEEEEecC-CCceEEEEcCCCCEEEEeCCCCCeEEEEE
Confidence 35666666511122 3444332 3456889999999888766 467999999
Q ss_pred ccCcccc-ceeeehhhhccccccCCCCCeEEEecCCCCCCeEEE-EEcCCEEEEEeccc----------ceEEEEeccCC
Q psy710 281 IESFTLS-GYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKLLL-AYETGLVVHWDLKL----------KRAEFRWQCSE 348 (591)
Q Consensus 281 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~-~~~dg~i~iwd~~~----------~~~~~~~~~~~ 348 (591)
+.+.+.. ...+.....+.... .-......++|+| +| .+++ ...|++|.+||+.. .+.+..+.-..
T Consensus 306 ~~~~~~~~~~~l~~~~~v~~~v-~vG~gP~h~aF~~-dG-~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~y 382 (595)
T 1fwx_A 306 VTRFDAVFYENADPRSAVVAEP-ELGLGPLHTAFDG-RG-NAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHY 382 (595)
T ss_dssp GGGHHHHHHSCCCGGGGEEECC-BCCSCEEEEEECT-TS-EEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSS
T ss_pred CcccccccccccCcccceEEEc-CCCCCcceEEECC-CC-eEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeeccc
Confidence 9975320 00011111111122 2234578899999 99 5544 55699999999987 55666665322
Q ss_pred Cee------EEEEeecCCEEEEEec---CCc----------EEEEecCCCCC
Q psy710 349 PIK------SVCWHYEGKQFLCSHT---DGT----------ISTWAVRPLAK 381 (591)
Q Consensus 349 ~v~------~~~~sp~g~~l~s~~~---dg~----------i~vwd~~~~~~ 381 (591)
..- .+.++|||++|+++.. |.. -.++|+. +++
T Consensus 383 qpGh~~~~~g~t~~~DGk~l~~~Nk~skdr~~~~gp~~~~~~ql~dis-~~~ 433 (595)
T 1fwx_A 383 QPGHLKTVMGETLDATNDWLVCLSKFSKDRFLNVGPLKPENDQLIDIS-GDK 433 (595)
T ss_dssp CEEEEEETTTTSTTCCSSEEEEEESCCTTSSCCCCSSCCEEEEEEECS-SSS
T ss_pred ccccceeccceEeCCCCCEEEEcCCCCccccccCCCCCCCcceEEEcC-CCc
Confidence 222 2245799999999863 432 1788886 444
No 236
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.14 E-value=9.3e-09 Score=98.10 Aligned_cols=238 Identities=13% Similarity=0.139 Sum_probs=149.2
Q ss_pred EEe--ecCCEEEE-ecCCCeEEEEeeccc--CceeeeEEE-------eeccceEEEEeeCCceEEEEEeCC------CcE
Q psy710 55 QFL--TNEGALIT-ATADDSLHLWNFRQK--RPEIVHSLK-------FQRERITYIHLPLQSKWLYVGTEK------GNI 116 (591)
Q Consensus 55 ~~s--p~~~~l~s-~~~d~~i~vw~~~~~--~~~~~~~~~-------~~~~~v~~~~~~~~~~~l~~~~~d------~~i 116 (591)
.++ ++.++|+. +..++.|.++|+.+. +++..+.++ ........+..+|++ .++++..+ +.|
T Consensus 88 ~~~~~~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v 166 (462)
T 2ece_A 88 NGKPNIERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGI 166 (462)
T ss_dssp TCCTTCCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEE
T ss_pred ccCCCccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeE
Confidence 346 77777665 556889999999743 445556653 111245667889999 66665555 689
Q ss_pred EEEEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCCCCEEEEEe----------
Q psy710 117 HVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGT---------- 186 (591)
Q Consensus 117 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---------- 186 (591)
.++|..+++.+........ ...-...+.|+|+++.+++..
T Consensus 167 ~vlD~~T~~v~~~~~~~~~------------------------------~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g 216 (462)
T 2ece_A 167 LMLDHYSFEPLGKWEIDRG------------------------------DQYLAYDFWWNLPNEVLVSSEWAVPNTIEDG 216 (462)
T ss_dssp EEECTTTCCEEEECCSBCT------------------------------TCCCCCCEEEETTTTEEEECBCCCHHHHTTC
T ss_pred EEEECCCCeEEEEEccCCC------------------------------CccccceEEECCCCCEEEEccCcCccccccc
Confidence 9999998887766541110 112235688899999888774
Q ss_pred ---------CCCcEEEeCCCCeEEEEeccCC---CcEEEEEE--EcCCceEEEEe------CCCcEEEEEccCCCcceEE
Q psy710 187 ---------KTGSLRLLGRPGVDAHVRHETD---AAVIQMQF--LTNEGALITAT------ADDSLHLWNFRQKRPEIVH 246 (591)
Q Consensus 187 ---------~dg~i~i~d~~~~~~~~~~~~~---~~v~~~~~--~~~~~~l~~~~------~d~~i~~wd~~~~~~~~~~ 246 (591)
...+|.+||+.+.+........ .....+.| +|+++++++++ .+++|.+|....+..+..+
T Consensus 217 ~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~ 296 (462)
T 2ece_A 217 LKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEK 296 (462)
T ss_dssp CCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEE
T ss_pred cchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEE
Confidence 3789999999877655443331 34556666 99999887776 4568887776554222222
Q ss_pred eeeec------------------cccEEEEEecCCCCEEEEEeC-CccEEEEEccCc---cccceeeehhhhccc--ccc
Q psy710 247 SLKFQ------------------RERITYIHLPLQSKWLYVGTE-KGNIHVVNIESF---TLSGYIINWNKAIDV--CMK 302 (591)
Q Consensus 247 ~~~~~------------------~~~v~~~~~sp~~~~l~~~~~-dg~i~i~d~~~~---~~~~~~~~~~~~~~~--~~~ 302 (591)
.+... ......+.+||||++|+++.. .+.|.+||+... ++.. .+.....+.+ ...
T Consensus 297 vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~-~I~tGG~~~~~~~~~ 375 (462)
T 2ece_A 297 VIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTG-KVKLGGIFHRADHPA 375 (462)
T ss_dssp EEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEE-EEECBTTTTCBCCTT
T ss_pred EEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEE-EEEeCCeeccccccc
Confidence 21100 134678899999999988775 569999998632 2211 0000000000 000
Q ss_pred CC--CCCeEEEecCCCCCCeEEEEE
Q psy710 303 TH--PGPIIHLSDNPLDPSKLLLAY 325 (591)
Q Consensus 303 ~~--~~~v~~~~~sp~~~~~l~~~~ 325 (591)
+. .+....++++| |+++|+++.
T Consensus 376 G~~~~ggPr~~~lSp-DGk~LyVaN 399 (462)
T 2ece_A 376 GHKLTGAPQMLEISR-DGRRVYVTN 399 (462)
T ss_dssp SCCCCSCCCCEEECT-TSSEEEEEC
T ss_pred cccCCCCCCEEEEcC-CCCEEEEEc
Confidence 00 12357789999 999999886
No 237
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.12 E-value=1.4e-07 Score=86.65 Aligned_cols=249 Identities=10% Similarity=0.013 Sum_probs=153.6
Q ss_pred CEEEEecCCCeEEEEeecccCcee---eeEEEeeccceEEEEeeCCceEEEEEe-CCCcEEEEEeeeeeeeceecccccc
Q psy710 61 GALITATADDSLHLWNFRQKRPEI---VHSLKFQRERITYIHLPLQSKWLYVGT-EKGNIHVVNIESFTLSGYIINWNKA 136 (591)
Q Consensus 61 ~~l~s~~~d~~i~vw~~~~~~~~~---~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~vwd~~~~~~~~~~~~~~~~ 136 (591)
++|+.+.. +.|+.++++...... ...+......+..++++++++.|+.+. ..+.|..+++........+.
T Consensus 2 ~~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~----- 75 (267)
T 1npe_A 2 THLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIR----- 75 (267)
T ss_dssp EEEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEEC-----
T ss_pred cEEEEEcC-CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEE-----
Confidence 45555543 578888887653211 112222334678999999766665554 46789999886543211110
Q ss_pred cccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCCCCEEEE-EeCCCcEEEeCCCCeEEEEec-cCCCcEEEE
Q psy710 137 IDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAI-GTKTGSLRLLGRPGVDAHVRH-ETDAAVIQM 214 (591)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~dg~i~i~d~~~~~~~~~~-~~~~~v~~~ 214 (591)
.....+..+++++++..+++ -...+.|.+++..+....... ........+
T Consensus 76 ----------------------------~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i 127 (267)
T 1npe_A 76 ----------------------------QDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGI 127 (267)
T ss_dssp ----------------------------TTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEE
T ss_pred ----------------------------CCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEE
Confidence 11134689999997655554 445678999888654322222 222467899
Q ss_pred EEEcCCceEEEEeC---CCcEEEEEccCCCcceEEeeeeccccEEEEEecCCCCEEEEEe-CCccEEEEEccCcccccee
Q psy710 215 QFLTNEGALITATA---DDSLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGT-EKGNIHVVNIESFTLSGYI 290 (591)
Q Consensus 215 ~~~~~~~~l~~~~~---d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~-~dg~i~i~d~~~~~~~~~~ 290 (591)
+++|++..|+.+.. .+.|..+++.....+.+ ..........++++|++..|+++. ..+.|.++|........
T Consensus 128 ~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~--~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~-- 203 (267)
T 1npe_A 128 VTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRIL--AQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRK-- 203 (267)
T ss_dssp EEETTTTEEEEEECCSSSCEEEEEETTSCCCEEE--ECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEE--
T ss_pred EEeeCCCEEEEEECCCCCcEEEEEecCCCCcEEE--EECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEE--
Confidence 99997766666554 36788888865422222 112234678999999877776555 45789999987643311
Q ss_pred eehhhhccccccCCCCCeEEEecCCCCCCeEEEEE-cCCEEEEEecccceEEEEeccC--CCeeEEEEeecCC
Q psy710 291 INWNKAIDVCMKTHPGPIIHLSDNPLDPSKLLLAY-ETGLVVHWDLKLKRAEFRWQCS--EPIKSVCWHYEGK 360 (591)
Q Consensus 291 ~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~--~~v~~~~~sp~g~ 360 (591)
... .......++. +++.|+.+. ..+.|..+|..+++....+... .....+++.|++.
T Consensus 204 ---------~~~-~~~~P~gi~~---d~~~lyva~~~~~~v~~~d~~~g~~~~~i~~g~~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 204 ---------VLE-GLQYPFAVTS---YGKNLYYTDWKTNSVIAMDLAISKEMDTFHPHKQTRLYGITIALSQC 263 (267)
T ss_dssp ---------EEE-CCCSEEEEEE---ETTEEEEEETTTTEEEEEETTTTEEEEEECCSSCCCCCCEEEECSCC
T ss_pred ---------Eec-CCCCceEEEE---eCCEEEEEECCCCeEEEEeCCCCCceEEEccccccccceeeecCccC
Confidence 111 1223455654 445566555 4689999999999988877632 2578888888764
No 238
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.10 E-value=1.7e-09 Score=107.04 Aligned_cols=278 Identities=10% Similarity=0.081 Sum_probs=171.6
Q ss_pred EEEEEeCCCcEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCC----CcCcce-----eeeccCCCCceEEEE-
Q psy710 106 WLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDN----PLDPSK-----TFRHGFPYQPTAIAF- 175 (591)
Q Consensus 106 ~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~-----~~~~~~~~~v~~~~~- 175 (591)
.|.+|+..|.++++-+.+++.++.+.-+......-+.-..+....+... ..+.++ .+..|-.. -..+++
T Consensus 17 ~f~s~g~~g~~~v~g~ps~r~~~~i~vf~~~~~~g~g~~~es~~~l~~~~~~~~~~~~~~~g~~~~~~gd~h-h~~~s~t 95 (595)
T 1fwx_A 17 GFWSSGQSGEMRILGIPSMRELMRVPVFNRCSATGWGQTNESVRIHERTMSERTKKFLAANGKRIHDNGDLH-HVHMSFT 95 (595)
T ss_dssp EEECCBTTCEEEEEEETTCCEEEEEESSSCCTTTCTTTBHHHHHHHHTTCCHHHHHHHHHTTCSSCCCCCBC-CEEEEEE
T ss_pred EEeeCCcCceEEEEecCCcceEEEeeeecCCCCcccCCchhHHHHHhccCCccchhhhhccCceecccCCCC-ccccCCC
Confidence 3677888999999999999988887765544322211111111111100 000000 01001111 123333
Q ss_pred --CCCCCEEEEEeC-CCcEEEeCCCCeEEEE--eccCCCcEEEEEE-E-cCCceEEEEe------------------CCC
Q psy710 176 --DPIQKLLAIGTK-TGSLRLLGRPGVDAHV--RHETDAAVIQMQF-L-TNEGALITAT------------------ADD 230 (591)
Q Consensus 176 --~~~~~~l~~~~~-dg~i~i~d~~~~~~~~--~~~~~~~v~~~~~-~-~~~~~l~~~~------------------~d~ 230 (591)
.+||+++++... ++.|.+.|+.+.++.. ..........+++ . |+++++++++ .++
T Consensus 96 ~g~~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~ 175 (595)
T 1fwx_A 96 EGKYDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVN 175 (595)
T ss_dssp TTEEEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEE
T ss_pred CCCcCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCc
Confidence 238888877665 5569999999988665 4433456888888 5 8999998885 235
Q ss_pred cEEEEEccCCCcceEEeeeeccccEEEEEecCCCCEEEEEeCCc---------------cEEEEEccCcccc---c----
Q psy710 231 SLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEKG---------------NIHVVNIESFTLS---G---- 288 (591)
Q Consensus 231 ~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg---------------~i~i~d~~~~~~~---~---- 288 (591)
.+.+.|..+. +...++.-.. ....++++|+|+++++.+.+. .|.++|....... +
T Consensus 176 ~vtvID~~t~--~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~ 252 (595)
T 1fwx_A 176 VFTAVDADKW--EVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQE 252 (595)
T ss_dssp EEEEEETTTT--EEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEE
T ss_pred eEEEEECCCC--eEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeE
Confidence 7899999987 6666666432 456778999999999988663 3555554432110 0
Q ss_pred ----eeeehhh---hc-cccccCCCCCeEEEecCCCCCCeEEEEE-cCCEEEEEecccce------------EEEEeccC
Q psy710 289 ----YIINWNK---AI-DVCMKTHPGPIIHLSDNPLDPSKLLLAY-ETGLVVHWDLKLKR------------AEFRWQCS 347 (591)
Q Consensus 289 ----~~~~~~~---~~-~~~~~~~~~~v~~~~~sp~~~~~l~~~~-~dg~i~iwd~~~~~------------~~~~~~~~ 347 (591)
..+.... .. ...+. -.....++.++| ||+++++++ .+.+|.++|+.+.+ +.....-.
T Consensus 253 i~~V~VID~~~~~~~~~~~~Ip-vg~~PhGv~~sP-DGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG 330 (595)
T 1fwx_A 253 LNGVKVVDGRKEASSLFTRYIP-IANNPHGCNMAP-DKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELG 330 (595)
T ss_dssp ETTEEEEECSGGGCCSSEEEEE-EESSCCCEEECT-TSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCC
T ss_pred ECcEEEEeCcccCCceeEEEEe-cCCCceEEEEcC-CCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCC
Confidence 0000000 00 00010 112345789999 999888766 48899999999753 45555566
Q ss_pred CCeeEEEEeecCCEEEEEecCCcEEEEecCCC---------CCceeeeccc
Q psy710 348 EPIKSVCWHYEGKQFLCSHTDGTISTWAVRPL---------AKPVSVNQPH 389 (591)
Q Consensus 348 ~~v~~~~~sp~g~~l~s~~~dg~i~vwd~~~~---------~~~~~~~~~~ 389 (591)
.....++|+|+|...++...|+.|.+||+... .+.++++..|
T Consensus 331 ~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~ 381 (595)
T 1fwx_A 331 LGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVH 381 (595)
T ss_dssp SCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECS
T ss_pred CCcceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecc
Confidence 78999999999954556678999999999831 3455566555
No 239
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.04 E-value=6.6e-07 Score=82.06 Aligned_cols=216 Identities=10% Similarity=0.017 Sum_probs=138.5
Q ss_pred CceEEEECCCCCEEEE-EeCCCcEEEeCCCCeEEEEec-cCCCcEEEEEEEcCCceEEEE-eCCCcEEEEEccCCCcceE
Q psy710 169 QPTAIAFDPIQKLLAI-GTKTGSLRLLGRPGVDAHVRH-ETDAAVIQMQFLTNEGALITA-TADDSLHLWNFRQKRPEIV 245 (591)
Q Consensus 169 ~v~~~~~~~~~~~l~~-~~~dg~i~i~d~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~-~~d~~i~~wd~~~~~~~~~ 245 (591)
.+..++++++++.|+. -..++.|..++..+....... ........+++++++..|+.+ ...+.|.++++.....+.+
T Consensus 37 ~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~ 116 (267)
T 1npe_A 37 VIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVL 116 (267)
T ss_dssp EEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE
T ss_pred cEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEE
Confidence 3579999997655554 445788999998765433222 222478899999976666555 4567899999875521222
Q ss_pred EeeeeccccEEEEEecCCCCEEEEEeC---CccEEEEEccCccccceeeehhhhccccccCCCCCeEEEecCCCCCCeEE
Q psy710 246 HSLKFQRERITYIHLPLQSKWLYVGTE---KGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKLL 322 (591)
Q Consensus 246 ~~~~~~~~~v~~~~~sp~~~~l~~~~~---dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~ 322 (591)
..........++++|++..|+.+.. .+.|..+++...... ............++++| +++.|+
T Consensus 117 --~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~-----------~~~~~~~~~P~gia~d~-~~~~ly 182 (267)
T 1npe_A 117 --FDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRR-----------ILAQDNLGLPNGLTFDA-FSSQLC 182 (267)
T ss_dssp --ECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCE-----------EEECTTCSCEEEEEEET-TTTEEE
T ss_pred --EECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcE-----------EEEECCCCCCcEEEEcC-CCCEEE
Confidence 2222246789999997776666654 367888887643221 01112234678999999 877776
Q ss_pred EEE-cCCEEEEEecccceEEEEeccCCCeeEEEEeecCCEEEEEe-cCCcEEEEecCCCCCceeeecccccccCCCCCCC
Q psy710 323 LAY-ETGLVVHWDLKLKRAEFRWQCSEPIKSVCWHYEGKQFLCSH-TDGTISTWAVRPLAKPVSVNQPHIKTNKDGKLEQ 400 (591)
Q Consensus 323 ~~~-~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~g~~l~s~~-~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (591)
.+. ..+.|.++|..+...............++. ++..|..+. ..+.|.++|.. +++.+..+....
T Consensus 183 v~d~~~~~I~~~~~~g~~~~~~~~~~~~P~gi~~--d~~~lyva~~~~~~v~~~d~~-~g~~~~~i~~g~---------- 249 (267)
T 1npe_A 183 WVDAGTHRAECLNPAQPGRRKVLEGLQYPFAVTS--YGKNLYYTDWKTNSVIAMDLA-ISKEMDTFHPHK---------- 249 (267)
T ss_dssp EEETTTTEEEEEETTEEEEEEEEECCCSEEEEEE--ETTEEEEEETTTTEEEEEETT-TTEEEEEECCSS----------
T ss_pred EEECCCCEEEEEecCCCceEEEecCCCCceEEEE--eCCEEEEEECCCCeEEEEeCC-CCCceEEEcccc----------
Confidence 655 468999999987665544443344566765 445555554 56789999988 677777665430
Q ss_pred CCcceEEEEee
Q psy710 401 CKPIQKVEWKH 411 (591)
Q Consensus 401 ~~~i~~~~~~~ 411 (591)
......|++.|
T Consensus 250 ~~~p~gi~~~~ 260 (267)
T 1npe_A 250 QTRLYGITIAL 260 (267)
T ss_dssp CCCCCCEEEEC
T ss_pred ccccceeeecC
Confidence 12356677766
No 240
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.03 E-value=9.8e-11 Score=113.10 Aligned_cols=220 Identities=13% Similarity=0.110 Sum_probs=118.7
Q ss_pred CCcEEEEEeCCCcEEEEcCC-CceeEeeccCCcceEEEEEeecCCEEEEecCCCeEEEEeecccCceeeeEEEeecc-ce
Q psy710 18 IQKLLAIGTKTGSLRLLGRP-GVDAHVRHETDAAVIQMQFLTNEGALITATADDSLHLWNFRQKRPEIVHSLKFQRE-RI 95 (591)
Q Consensus 18 dg~~la~g~~dg~i~lw~~~-~~~~~~~~~h~~~v~~l~~sp~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~-~v 95 (591)
++..+++++.||.|+.||.. ++.+..+.. +.+.+..+..++..+++++.|+.|..||.++++. +.....+.. .+
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~--~w~~~~~~~~~~ 83 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEG--LTKLPFTIPELV 83 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CC--SEECSCCHHHHH
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCce--eeeeeccCcccc
Confidence 57789999999999999976 666666655 4566666667787888888999999999988852 333332211 11
Q ss_pred E-EEEeeCCceEEEEEeCCCcEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEE
Q psy710 96 T-YIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIA 174 (591)
Q Consensus 96 ~-~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 174 (591)
. +..+. ++..+++++.++.++.||..+|+.+..+... ....
T Consensus 84 ~~sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~-------------------------------------~~~~ 125 (369)
T 2hz6_A 84 QASPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSA-------------------------------------FADS 125 (369)
T ss_dssp TTCSCC------CCCCEEEEEEEEECCC----------------------------------------------------
T ss_pred ccCceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecCC-------------------------------------Cccc
Confidence 1 01111 4557788888999999999998866544310 0123
Q ss_pred ECCCCCEEEEEeCCCcEEEeCCCCeEEEEeccCCCcEEEEEEEcCC---ceEEEEeCCCcEEEEEccCCCcceEEeeeec
Q psy710 175 FDPIQKLLAIGTKTGSLRLLGRPGVDAHVRHETDAAVIQMQFLTNE---GALITATADDSLHLWNFRQKRPEIVHSLKFQ 251 (591)
Q Consensus 175 ~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~---~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~ 251 (591)
++|++..+++++.++.|+.||..+++........ ......+..+. ..+++++.||.++.||.+++ +.+......
T Consensus 126 ~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~-~~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG--~~~W~~~~~ 202 (369)
T 2hz6_A 126 LSPSTSLLYLGRTEYTITMYDTKTRELRWNATYF-DYAASLPEDDVDYKMSHFVSNGDGLVVTVDSESG--DVLWIQNYA 202 (369)
T ss_dssp -------EEEEEEEEEEECCCSSSSSCCCEEEEE-EECCBCCCCCTTCCCCEEEEETSCEEEEECTTTC--CEEEEEECS
T ss_pred ccccCCEEEEEecCCEEEEEECCCCCEEEeEecc-cccCccccCCccccceEEEECCCCEEEEEECCCC--cEEEEecCC
Confidence 4567788999999999999999876543221110 11222333322 56778889999999999988 566655543
Q ss_pred cccE-EEEEecCCCCEE----EEEeCCccEEEEEccCcc
Q psy710 252 RERI-TYIHLPLQSKWL----YVGTEKGNIHVVNIESFT 285 (591)
Q Consensus 252 ~~~v-~~~~~sp~~~~l----~~~~~dg~i~i~d~~~~~ 285 (591)
.++ ....+++++... +.+ ++.++.+|..+++
T Consensus 203 -~pv~~~~~~~~dg~~~v~~~~~~--~~~l~~ld~~tG~ 238 (369)
T 2hz6_A 203 -SPVVAFYVWQREGLRKVMHINVA--VETLRYLTFMSGE 238 (369)
T ss_dssp -SCEEEEEECTTSSCEEECCEEEE--HHHHHHHHHHHHH
T ss_pred -CceEEEEEecCCceEeccceeec--ccceeeeehhcCC
Confidence 343 334455555432 112 3455566665554
No 241
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=99.02 E-value=4.7e-06 Score=89.26 Aligned_cols=328 Identities=15% Similarity=0.120 Sum_probs=196.5
Q ss_pred CCCcEEEeCCCCcEEEEEeCCCcEEEEcCCCceeEeecc--------CCcceEEEEEeecCCEEEEecCCCeEEEEeecc
Q psy710 8 YQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGVDAHVRHE--------TDAAVIQMQFLTNEGALITATADDSLHLWNFRQ 79 (591)
Q Consensus 8 ~~v~~~~~spdg~~la~g~~dg~i~lw~~~~~~~~~~~~--------h~~~v~~l~~sp~~~~l~s~~~d~~i~vw~~~~ 79 (591)
..|.++...++|.+.+ |+.++-+..|+........+.. ....|.++...+++.+.+.. .+ -+.+||..+
T Consensus 163 ~~i~~i~~d~~g~lwi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lwigt-~~-Gl~~~d~~~ 239 (781)
T 3v9f_A 163 EQTWTATEAEDGKLYI-GHVEGGLSILSLNDKSVKHFVHDPQNPNSLPGNDVRCIYKDTNGNIWIGT-SK-GLALFNANT 239 (781)
T ss_dssp CCEEEEEEEETTEEEE-EETTTEEEEEETTTTEEEEECC--------CCSSEEEEEECTTCCEEEEE-TT-EEEEEETTT
T ss_pred cceEEEEECCCCCEEE-EecCCCeEEEcCCCCceEeeecCCCCcccCCCCceeEEEEcCCCCEEEEe-CC-cHheECCCC
Confidence 4577888877776555 6666458888877554443321 13568888888887755543 44 688888766
Q ss_pred cCceeeeEE-----EeeccceEEEEeeCCceEEEEEeCCCcEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCC
Q psy710 80 KRPEIVHSL-----KFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDN 154 (591)
Q Consensus 80 ~~~~~~~~~-----~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (591)
++....... ......|.++...+++. |..|+..+.|.+++..+.+........-.. +...
T Consensus 240 ~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~f~~--------------~~~~ 304 (781)
T 3v9f_A 240 ETFTNFHNNPGNIHGALSSYIFSIKQLKDNK-LWIATELNGIMILDLQQNQFLLPEQIRFEF--------------IREG 304 (781)
T ss_dssp TEEEC-----------CCCCEEEEEECTTSE-EEEEESSSCEEEEETTCC---------CEE--------------ECBC
T ss_pred CcEEEEEcCCCccccccCceEEEEEECCCCC-EEEEeCCCCeEEECCCCCeeeeeecccccc--------------ccCC
Confidence 531111110 11235688888887776 445666567888888765432211100000 0000
Q ss_pred CcCcceeeeccCCCCceEEEECCCCCEEEEEeCCCcEEEeCCCCeEEEEec-------c---CCCcEEEEEEEcCCceEE
Q psy710 155 PLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGVDAHVRH-------E---TDAAVIQMQFLTNEGALI 224 (591)
Q Consensus 155 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~-------~---~~~~v~~~~~~~~~~~l~ 224 (591)
.... .-....|.++..+++|. |-+|+.++-|..++.......... . ....|.++...+++. |.
T Consensus 305 --~~~~---~l~~~~v~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~-lW 377 (781)
T 3v9f_A 305 --DNNY---SLSNASARYIFQDSFNN-IWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGK-LW 377 (781)
T ss_dssp --SSTT---SBSSSCEEEEEECSSCC-EEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSC-EE
T ss_pred --CCCC---CCCCCeEEEEEEeCCCC-EEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCC-EE
Confidence 0000 01235688999999887 667787777888887654433221 1 135688888887775 55
Q ss_pred EEeCCCcEEEEEccCCCcceEEee----eeccccEEEEEecCCCCEEEEEeCCccEEEEEccCccccceeeehhhhcccc
Q psy710 225 TATADDSLHLWNFRQKRPEIVHSL----KFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVC 300 (591)
Q Consensus 225 ~~~~d~~i~~wd~~~~~~~~~~~~----~~~~~~v~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~ 300 (591)
.|+.++-|..||..+. . ...+ ......|.++...+++. |.+|+.++-+..++..+++...+ . .
T Consensus 378 igt~~~Gl~~~~~~~~--~-~~~~~~~~~~~~~~v~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~--------~-~ 444 (781)
T 3v9f_A 378 IGTDGGGINVFENGKR--V-AIYNKENRELLSNSVLCSLKDSEGN-LWFGTYLGNISYYNTRLKKFQII--------E-L 444 (781)
T ss_dssp EEEBSSCEEEEETTEE--E-EECC-----CCCSBEEEEEECTTSC-EEEEETTEEEEEECSSSCEEEEC--------C-S
T ss_pred EEeCCCcEEEEECCCC--e-EEEccCCCCCCCcceEEEEECCCCC-EEEEeccCCEEEEcCCCCcEEEe--------c-c
Confidence 5665566888987654 1 1111 12336789999888877 55577777899999877654210 0 0
Q ss_pred ccCCCCCeEEEecCCCCCCeEEEEEcCCEEEEEecccceEEEEec-c-----CCCeeEEEEeecCCEEEEEecCCcEEEE
Q psy710 301 MKTHPGPIIHLSDNPLDPSKLLLAYETGLVVHWDLKLKRAEFRWQ-C-----SEPIKSVCWHYEGKQFLCSHTDGTISTW 374 (591)
Q Consensus 301 ~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~-----~~~v~~~~~sp~g~~l~s~~~dg~i~vw 374 (591)
.......|.++...+ ++. |..|+. +-+..||..+++...... . ...|.++...++|++.+....+| |..|
T Consensus 445 ~~~~~~~v~~i~~d~-~g~-lwigt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~G-l~~~ 520 (781)
T 3v9f_A 445 EKNELLDVRVFYEDK-NKK-IWIGTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGG-VGIY 520 (781)
T ss_dssp TTTCCCCEEEEEECT-TSE-EEEEET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSC-EEEE
T ss_pred CCCCCCeEEEEEECC-CCC-EEEEEC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcCCC-EEEE
Confidence 012346788998877 655 555555 568899988876654432 1 36789999988888665543345 7778
Q ss_pred ecC
Q psy710 375 AVR 377 (591)
Q Consensus 375 d~~ 377 (591)
|..
T Consensus 521 ~~~ 523 (781)
T 3v9f_A 521 TPD 523 (781)
T ss_dssp CTT
T ss_pred eCC
Confidence 876
No 242
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.01 E-value=9e-09 Score=98.01 Aligned_cols=265 Identities=11% Similarity=0.045 Sum_probs=157.6
Q ss_pred EEeecCCEEEEecCCCeEEEEeecccCceeeeEEEeeccceEEEEeeCCceEEEEEeCCCcEEEEEeeeeeeeceecccc
Q psy710 55 QFLTNEGALITATADDSLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWN 134 (591)
Q Consensus 55 ~~sp~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~ 134 (591)
....++ .|..++.++.|..|| .+++ .......+...+.++...+++. +++++.+ |..+|. +++........
T Consensus 26 ~~d~~g-~l~v~t~~~~l~~~d-~~g~--~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~--l~~~d~-~g~~~~~~~~~- 96 (330)
T 3hxj_A 26 ILAKNG-TIYLGSSNKNLYAIN-TDGS--VKWFFKSGEIIECRPSIGKDGT-IYFGSDK--VYAINP-DGTEKWRFDTK- 96 (330)
T ss_dssp EECTTS-CEECSSTTTTTEEEC-TTSC--EEESSCGGGEEEECCEETTTTE-ECCSSCE--EEEECC-CGGGGGGSCC--
T ss_pred eEccCC-eEEEEcCCCEEEEEC-CCCc--EEEEEecCCCcccceEEecCCc-EEEecCc--EEEECC-CCcEEEEEECC-
Confidence 333444 566777788899999 7764 3444443444456677766665 4445444 777775 44332221100
Q ss_pred cccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCCCCEEEEEeCCCcEEEeCCCCeEEEEeccCCCcEEEE
Q psy710 135 KAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGVDAHVRHETDAAVIQM 214 (591)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~v~~~ 214 (591)
........+. +..+.+++.++.+..+|...............+.++
T Consensus 97 --------------------------------~~~~~~~~~~--~~~l~v~t~~~~l~~~d~~g~~~~~~~~~~~~~~~~ 142 (330)
T 3hxj_A 97 --------------------------------KAIVSDFTIF--EDILYVTSMDGHLYAINTDGTEKWRFKTKKAIYATP 142 (330)
T ss_dssp ------------------------------------CCEEEE--TTEEEEECTTSEEEEECTTSCEEEEEECSSCCCSCC
T ss_pred --------------------------------CCcccCceEE--CCEEEEEecCCEEEEEcCCCCEEEEEcCCCceeeee
Confidence 0001122222 455788888999999998833332222233345566
Q ss_pred EEEcCCceEEEEeCCCcEEEEEccCCCcceEEeeeeccccEEEEEecCCCCEEEEEeCCccEEEEEccCccccceeeehh
Q psy710 215 QFLTNEGALITATADDSLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWN 294 (591)
Q Consensus 215 ~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~ 294 (591)
...+++. +..++.++.|..+|.. + +....+......+.++...+++. +++++ +.+..+| .+++..
T Consensus 143 ~~~~~g~-l~vgt~~~~l~~~d~~-g--~~~~~~~~~~~~~~~~~~d~~g~-l~v~t--~~l~~~d-~~g~~~------- 207 (330)
T 3hxj_A 143 IVSEDGT-IYVGSNDNYLYAINPD-G--TEKWRFKTNDAITSAASIGKDGT-IYFGS--DKVYAIN-PDGTEK------- 207 (330)
T ss_dssp EECTTSC-EEEECTTSEEEEECTT-S--CEEEEEECSSCCCSCCEECTTCC-EEEES--SSEEEEC-TTSCEE-------
T ss_pred EEcCCCE-EEEEcCCCEEEEECCC-C--CEeEEEecCCCceeeeEEcCCCE-EEEEe--CEEEEEC-CCCcEE-------
Confidence 6666665 6667778999999988 5 45555554445666777777777 44555 7899999 554432
Q ss_pred hhccccccCCCCCeEEEecCCCCCCeEEEEEcCCEEEEEecccceEEEEec-cCCCeeEEEEeecCCEEEEEecCCcEEE
Q psy710 295 KAIDVCMKTHPGPIIHLSDNPLDPSKLLLAYETGLVVHWDLKLKRAEFRWQ-CSEPIKSVCWHYEGKQFLCSHTDGTIST 373 (591)
Q Consensus 295 ~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp~g~~l~s~~~dg~i~v 373 (591)
.........+.++...+ ++ .|..++.++.+..+|.. ++....+. ....+..+...+++ .|..++.+|.|..
T Consensus 208 ----~~~~~~~~~~~~~~~~~-~g-~l~v~t~~~gl~~~~~~-g~~~~~~~~~~~~~~~~~~~~~g-~l~v~t~~ggl~~ 279 (330)
T 3hxj_A 208 ----WNFYAGYWTVTRPAISE-DG-TIYVTSLDGHLYAINPD-GTEKWRFKTGKRIESSPVIGNTD-TIYFGSYDGHLYA 279 (330)
T ss_dssp ----EEECCSSCCCSCCEECT-TS-CEEEEETTTEEEEECTT-SCEEEEEECSSCCCSCCEECTTS-CEEEECTTCEEEE
T ss_pred ----EEEccCCcceeceEECC-CC-eEEEEcCCCeEEEECCC-CCEeEEeeCCCCccccceEcCCC-eEEEecCCCCEEE
Confidence 01122234566777777 54 56667778888888854 44444444 33344556665555 4667778888999
Q ss_pred EecCCCCCceeeec
Q psy710 374 WAVRPLAKPVSVNQ 387 (591)
Q Consensus 374 wd~~~~~~~~~~~~ 387 (591)
+|. .++.+....
T Consensus 280 ~d~--~g~~~~~~~ 291 (330)
T 3hxj_A 280 INP--DGTEKWNFE 291 (330)
T ss_dssp ECT--TSCEEEEEE
T ss_pred ECC--CCcEEEEEE
Confidence 985 355554443
No 243
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=99.01 E-value=3.9e-06 Score=89.86 Aligned_cols=322 Identities=13% Similarity=0.054 Sum_probs=200.8
Q ss_pred CCCCcEEEeCCCCcEEEEEeCCCcEEEEcCCCceeEeec---------------cCCcceEEEEEeecCCEEEEecCCCe
Q psy710 7 PYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGVDAHVRH---------------ETDAAVIQMQFLTNEGALITATADDS 71 (591)
Q Consensus 7 ~~~v~~~~~spdg~~la~g~~dg~i~lw~~~~~~~~~~~---------------~h~~~v~~l~~sp~~~~l~s~~~d~~ 71 (591)
...|.++...++|.+. +|+..+-|.+++........+. -....|.++...++|. |..|+.++-
T Consensus 257 ~~~i~~i~~d~~g~lW-igt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~-lWigt~~~G 334 (781)
T 3v9f_A 257 SSYIFSIKQLKDNKLW-IATELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNN-IWIGTWGGG 334 (781)
T ss_dssp CCCEEEEEECTTSEEE-EEESSSCEEEEETTCC---------CEEECBCSSTTSBSSSCEEEEEECSSCC-EEEEEBSSC
T ss_pred CceEEEEEECCCCCEE-EEeCCCCeEEECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCC-EEEEecCCe
Confidence 3568899998888754 4666455888887644332221 1346799998888876 555666777
Q ss_pred EEEEeecccCceeeeEE-------EeeccceEEEEeeCCceEEEEEeCCCcEEEEEeeeeeeeceecccccccccCCCCC
Q psy710 72 LHLWNFRQKRPEIVHSL-------KFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTH 144 (591)
Q Consensus 72 i~vw~~~~~~~~~~~~~-------~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~ 144 (591)
|..++............ ......|.++...+++. |..|+.++.|..++..+++....... .
T Consensus 335 l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~--~--------- 402 (781)
T 3v9f_A 335 INFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGK-LWIGTDGGGINVFENGKRVAIYNKEN--R--------- 402 (781)
T ss_dssp EEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSC-EEEEEBSSCEEEEETTEEEEECC---------------
T ss_pred EEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCC-EEEEeCCCcEEEEECCCCeEEEccCC--C---------
Confidence 88888776532111100 01235688888877765 55667667799999877554322100 0
Q ss_pred CCceeccCCCCcCcceeeeccCCCCceEEEECCCCCEEEEEeCCCcEEEeCCCCeEEEEecc---CCCcEEEEEEEcCCc
Q psy710 145 PGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGVDAHVRHE---TDAAVIQMQFLTNEG 221 (591)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~---~~~~v~~~~~~~~~~ 221 (591)
......|.++..+++++ |.+|+.++-+..++..+.+...... ....|.++...+++.
T Consensus 403 -------------------~~~~~~v~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~ 462 (781)
T 3v9f_A 403 -------------------ELLSNSVLCSLKDSEGN-LWFGTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKK 462 (781)
T ss_dssp --------------------CCCSBEEEEEECTTSC-EEEEETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSE
T ss_pred -------------------CCCCcceEEEEECCCCC-EEEEeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCC
Confidence 01235578999888887 5557777779999988776554332 245788888887776
Q ss_pred eEEEEeCCCcEEEEEccCCCcceEEeee---eccccEEEEEecCCCCEEEEEeCCccEEEEEccCccccceeeehhhhcc
Q psy710 222 ALITATADDSLHLWNFRQKRPEIVHSLK---FQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAID 298 (591)
Q Consensus 222 ~l~~~~~d~~i~~wd~~~~~~~~~~~~~---~~~~~v~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~ 298 (591)
. ..++. +-|..+|..+++........ .....|.++..+++|++ .+|+.++-+..||..+.+...+.
T Consensus 463 l-wigt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~l-Wigt~~~Gl~~~~~~~~~~~~~~-------- 531 (781)
T 3v9f_A 463 I-WIGTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRF-WIGTFGGGVGIYTPDMQLVRKFN-------- 531 (781)
T ss_dssp E-EEEET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCE-EEEESSSCEEEECTTCCEEEEEC--------
T ss_pred E-EEEEC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCE-EEEEcCCCEEEEeCCCCeEEEcc--------
Confidence 4 44455 55888998876333222211 11357899999988874 55666455888888765542110
Q ss_pred ccccCCCCCeEEEecCCCCCCeEEEEEcCCEEEEEecccceEEEEec----cCCCeeEEEEeecCCEEEEEecCCcEEEE
Q psy710 299 VCMKTHPGPIIHLSDNPLDPSKLLLAYETGLVVHWDLKLKRAEFRWQ----CSEPIKSVCWHYEGKQFLCSHTDGTISTW 374 (591)
Q Consensus 299 ~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~----~~~~v~~~~~sp~g~~l~s~~~dg~i~vw 374 (591)
.........|.++...+ ++.+ ..++.+|.+..||..+++....-. ....|.++...++|.+.++ +.+| |..+
T Consensus 532 ~~~~l~~~~i~~i~~d~-~g~l-Wi~T~~Glv~~~d~~~~~~~~~~~~~gl~~~~i~~i~~d~~g~lW~~-t~~G-l~~~ 607 (781)
T 3v9f_A 532 QYEGFCSNTINQIYRSS-KGQM-WLATGEGLVCFPSARNFDYQVFQRKEGLPNTHIRAISEDKNGNIWAS-TNTG-ISCY 607 (781)
T ss_dssp TTTTCSCSCEEEEEECT-TSCE-EEEETTEEEEESCTTTCCCEEECGGGTCSCCCCCEEEECSSSCEEEE-CSSC-EEEE
T ss_pred CCCCCCCCeeEEEEECC-CCCE-EEEECCCceEEECCCCCcEEEccccCCCCCceEEEEEECCCCCEEEE-cCCc-eEEE
Confidence 00111245788999888 7664 445556765889988877554432 2356888988888876655 4555 7778
Q ss_pred ecC
Q psy710 375 AVR 377 (591)
Q Consensus 375 d~~ 377 (591)
+..
T Consensus 608 ~~~ 610 (781)
T 3v9f_A 608 ITS 610 (781)
T ss_dssp ETT
T ss_pred ECC
Confidence 876
No 244
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.00 E-value=4.9e-11 Score=115.22 Aligned_cols=188 Identities=16% Similarity=0.137 Sum_probs=106.1
Q ss_pred CCCEEEEEeCCCcEEEeCCCCeEEEEeccCCCcEEEEEEEcCCceEEEEeCCCcEEEEEccCCCcceEEeeeeccc-cEE
Q psy710 178 IQKLLAIGTKTGSLRLLGRPGVDAHVRHETDAAVIQMQFLTNEGALITATADDSLHLWNFRQKRPEIVHSLKFQRE-RIT 256 (591)
Q Consensus 178 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~-~v~ 256 (591)
++..+++++.||.|+.||..+++....... ..+.+..+..++..+++++.|+.|+.||..+++ .+..+..+.. .+.
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~-~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~--~~w~~~~~~~~~~~ 84 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE-DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNE--GLTKLPFTIPELVQ 84 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC-CCSCCCC-----CCEEECTTTCCEEEC-----C--CSEECSCCHHHHHT
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC-CCceecceEcCCCEEEEeCCCCEEEEEECCCCc--eeeeeeccCccccc
Confidence 567899999999999999988877654444 455555556677788888899999999998873 3333332211 111
Q ss_pred -EEEecCCCCEEEEEeCCccEEEEEccCccccceeeehhhhccccccCCCCCeEEEecCCCCCCeEEEEEcCCEEEEEec
Q psy710 257 -YIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKLLLAYETGLVVHWDL 335 (591)
Q Consensus 257 -~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~iwd~ 335 (591)
...+. ++..+++++.++.++.||..+++..- .+..+. ...++| +++.+++++.|+.|+.||.
T Consensus 85 ~sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w-----------~~~~~~----~~~~~p-~~~~v~~~~~dg~v~a~d~ 147 (369)
T 2hz6_A 85 ASPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQ-----------TLSSAF----ADSLSP-STSLLYLGRTEYTITMYDT 147 (369)
T ss_dssp TCSCC------CCCCEEEEEEEEECCC--------------------------------------EEEEEEEEEEECCCS
T ss_pred cCceEe-cCCEEEEEeCCCEEEEEECCCCcEEE-----------EecCCC----cccccc-cCCEEEEEecCCEEEEEEC
Confidence 01111 34567888889999999999987631 222221 245677 8889999999999999999
Q ss_pred ccceEEEEeccCCCeeEEEEeecC---CEEEEEecCCcEEEEecCCCCCceeeec
Q psy710 336 KLKRAEFRWQCSEPIKSVCWHYEG---KQFLCSHTDGTISTWAVRPLAKPVSVNQ 387 (591)
Q Consensus 336 ~~~~~~~~~~~~~~v~~~~~sp~g---~~l~s~~~dg~i~vwd~~~~~~~~~~~~ 387 (591)
.+++.+..+.... ....+++++. ..+++++.||.|+.||.. +++.+-...
T Consensus 148 ~tG~~~W~~~~~~-~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~-tG~~~W~~~ 200 (369)
T 2hz6_A 148 KTRELRWNATYFD-YAASLPEDDVDYKMSHFVSNGDGLVVTVDSE-SGDVLWIQN 200 (369)
T ss_dssp SSSSCCCEEEEEE-ECCBCCCCCTTCCCCEEEEETSCEEEEECTT-TCCEEEEEE
T ss_pred CCCCEEEeEeccc-ccCccccCCccccceEEEECCCCEEEEEECC-CCcEEEEec
Confidence 9988765443111 1223333332 457778899999999998 677655544
No 245
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.98 E-value=1.7e-07 Score=88.68 Aligned_cols=245 Identities=11% Similarity=-0.015 Sum_probs=142.8
Q ss_pred cceEEEEEeecCCEEEEecCCCeEEEEeecccCceeeeEEEe--------------------eccceEEEEeeC-CceEE
Q psy710 49 AAVIQMQFLTNEGALITATADDSLHLWNFRQKRPEIVHSLKF--------------------QRERITYIHLPL-QSKWL 107 (591)
Q Consensus 49 ~~v~~l~~sp~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~--------------------~~~~v~~~~~~~-~~~~l 107 (591)
....+++|.+++++++++..++.|..|+..+++ +..+.. ....+..+++.+ +++ |
T Consensus 19 ~~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~---~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~-l 94 (322)
T 2fp8_A 19 YAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNSG---FVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQ-L 94 (322)
T ss_dssp SCCCCEECCTTCSSEEEECTTSEEEEECCTTTC---EEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTE-E
T ss_pred CCceEEEEcCCCCEEEEEcCCCeEEEECCCCCc---eEEEecccccccccccccccchhccccCCCCceEEEcCCCCc-E
Confidence 345678899998878888888999999887653 222221 113578899997 555 5
Q ss_pred EEEeCCCcEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECC-CCCEEEEEe
Q psy710 108 YVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDP-IQKLLAIGT 186 (591)
Q Consensus 108 ~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~ 186 (591)
+++...+.|..+|..+++......... ......+..+++++ +|++.++-.
T Consensus 95 ~v~d~~~~i~~~d~~~g~~~~~~~~~~-----------------------------~~~~~~p~~i~~d~~~G~l~v~d~ 145 (322)
T 2fp8_A 95 YIVDCYYHLSVVGSEGGHATQLATSVD-----------------------------GVPFKWLYAVTVDQRTGIVYFTDV 145 (322)
T ss_dssp EEEETTTEEEEECTTCEECEEEESEET-----------------------------TEECSCEEEEEECTTTCCEEEEES
T ss_pred EEEECCCCEEEEeCCCCEEEEecccCC-----------------------------CCcccccceEEEecCCCEEEEECC
Confidence 555444558888876554221111000 00112357899999 898666543
Q ss_pred C-----------------CCcEEEeCCCCeEEEEeccCCCcEEEEEEEcCCceEEEE-eCCCcEEEEEccCCCcceEEee
Q psy710 187 K-----------------TGSLRLLGRPGVDAHVRHETDAAVIQMQFLTNEGALITA-TADDSLHLWNFRQKRPEIVHSL 248 (591)
Q Consensus 187 ~-----------------dg~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~~wd~~~~~~~~~~~~ 248 (591)
. ++.|..+|..+.+.............++++|+++.|+.+ ..++.|..|++..........+
T Consensus 146 ~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~ 225 (322)
T 2fp8_A 146 STLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVL 225 (322)
T ss_dssp CSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEE
T ss_pred cccccccccceehcccCCCceEEEEeCCCCEEEEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceE
Confidence 2 367888888765543322222355679999999877666 5568899999875321112222
Q ss_pred eeccccEEEEEecCCCCEEEEEeC----------CccEEEEEccCccccceeeehhhhccccccCC-CCCeEEEecCCCC
Q psy710 249 KFQRERITYIHLPLQSKWLYVGTE----------KGNIHVVNIESFTLSGYIINWNKAIDVCMKTH-PGPIIHLSDNPLD 317 (591)
Q Consensus 249 ~~~~~~v~~~~~sp~~~~l~~~~~----------dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~sp~~ 317 (591)
....+ ...++++++|++.++... .+.|..+|.. ++.... + . ...+. ...+..+++ . +
T Consensus 226 ~~~~g-P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~-G~~~~~-~------~-~~~g~~~~~~~~~~~-~-~ 293 (322)
T 2fp8_A 226 VKIPN-PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEF-GNILEV-I------P-LPPPFAGEHFEQIQE-H-D 293 (322)
T ss_dssp EECSS-EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTT-SCEEEE-E------E-CCTTTTTSCCCEEEE-E-T
T ss_pred EeCCC-CCCeEECCCCCEEEEecCcccccccCCCccEEEEECCC-CCEEEE-E------E-CCCCCccccceEEEE-e-C
Confidence 11223 778999999986555443 3568888764 332110 0 0 01111 233555555 3 4
Q ss_pred CCeEEEEEcCCEEEEEecccc
Q psy710 318 PSKLLLAYETGLVVHWDLKLK 338 (591)
Q Consensus 318 ~~~l~~~~~dg~i~iwd~~~~ 338 (591)
+++.++....+.|..+++...
T Consensus 294 g~L~v~~~~~~~i~~~~~~~~ 314 (322)
T 2fp8_A 294 GLLYIGTLFHGSVGILVYDKK 314 (322)
T ss_dssp TEEEEECSSCSEEEEEEC---
T ss_pred CEEEEeecCCCceEEEecccc
Confidence 555555556778888887643
No 246
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.98 E-value=1.6e-07 Score=97.84 Aligned_cols=324 Identities=11% Similarity=0.106 Sum_probs=182.7
Q ss_pred CcEEEEEeCCCcEEEEcCC-CceeEeeccCCcc----------e-EEEEEeecCCEEEEecCCCeEEEEeecccCceeee
Q psy710 19 QKLLAIGTKTGSLRLLGRP-GVDAHVRHETDAA----------V-IQMQFLTNEGALITATADDSLHLWNFRQKRPEIVH 86 (591)
Q Consensus 19 g~~la~g~~dg~i~lw~~~-~~~~~~~~~h~~~----------v-~~l~~sp~~~~l~s~~~d~~i~vw~~~~~~~~~~~ 86 (591)
+..|++++.++.|..+|.. ++++......... + ..+++ .+..++.++.|+.|..+|..+++ .+.
T Consensus 66 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~--~~W 141 (668)
T 1kv9_A 66 DGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVAL--WGDKVYVGTLDGRLIALDAKTGK--AIW 141 (668)
T ss_dssp TTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--EBTEEEEECTTSEEEEEETTTCC--EEE
T ss_pred CCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEE--ECCEEEEEcCCCEEEEEECCCCC--Eee
Confidence 4566677788899999976 6655554322110 0 11222 34678888889999999999986 444
Q ss_pred EEEeecc-ceEEEEeeC--CceEEEEEeC------CCcEEEEEeeeeeeeceecccccccccCCCCCCCce---eccCCC
Q psy710 87 SLKFQRE-RITYIHLPL--QSKWLYVGTE------KGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPI---IHLSDN 154 (591)
Q Consensus 87 ~~~~~~~-~v~~~~~~~--~~~~l~~~~~------d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 154 (591)
.+..... ....+.-+| .+..++++.. ++.|+.+|..+|+.+..+............ ...+. ..+...
T Consensus 142 ~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~-~~~~~~~~~~~~g~ 220 (668)
T 1kv9_A 142 SQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYE-HPELREAAKTWQGD 220 (668)
T ss_dssp EEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCS-SHHHHHHHTTCCSS
T ss_pred eeccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCcccc-ccccccccccCCcc
Confidence 4433210 000011111 1334444432 589999999999987766532110000000 00000 000000
Q ss_pred CcCcceeeeccCCCCceEEEECCCCCEEEEEeCCCc-------------------EEEeCCCCeEEEEeccC--------
Q psy710 155 PLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTKTGS-------------------LRLLGRPGVDAHVRHET-------- 207 (591)
Q Consensus 155 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~-------------------i~i~d~~~~~~~~~~~~-------- 207 (591)
...+. .+....-..++++|+..++++++.++. |..+|..+++.......
T Consensus 221 --~~w~~--~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~ 296 (668)
T 1kv9_A 221 --QYWKL--GGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDF 296 (668)
T ss_dssp --CHHHH--CEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCC
T ss_pred --ceeee--CCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccc
Confidence 00000 011222346789998888888887763 88999998887644332
Q ss_pred --CCcEEEEEEEcCCc---eEEEEeCCCcEEEEEccCCCcceEEeeeecc------------ccE---------------
Q psy710 208 --DAAVIQMQFLTNEG---ALITATADDSLHLWNFRQKRPEIVHSLKFQR------------ERI--------------- 255 (591)
Q Consensus 208 --~~~v~~~~~~~~~~---~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~------------~~v--------------- 255 (591)
..+.....+..+|+ .++.++.+|.++++|..++ +.+....... .++
T Consensus 297 ~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG--~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~ 374 (668)
T 1kv9_A 297 TATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNG--KLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMW 374 (668)
T ss_dssp CCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTC--CEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEES
T ss_pred cCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCC--CEeccccccccccccccccccCCccccccccccCCeeEEC
Confidence 12333333444675 6888899999999999988 4443322111 000
Q ss_pred ---------EEEEecCCCCEEEEEe------------------------------------CCccEEEEEccCcccccee
Q psy710 256 ---------TYIHLPLQSKWLYVGT------------------------------------EKGNIHVVNIESFTLSGYI 290 (591)
Q Consensus 256 ---------~~~~~sp~~~~l~~~~------------------------------------~dg~i~i~d~~~~~~~~~~ 290 (591)
..++++|+..++++.. .+|.|..||+.+++..
T Consensus 375 p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~--- 451 (668)
T 1kv9_A 375 PSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAA--- 451 (668)
T ss_dssp SCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEE---
T ss_pred CCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcEE---
Confidence 1256777777666421 2377889999888763
Q ss_pred eehhhhccccccCCCCCeEEEecCCCCCCeEEEEEcCCEEEEEecccceEEEEeccCCCe--eEEEEeecCC-EEEEEe
Q psy710 291 INWNKAIDVCMKTHPGPIIHLSDNPLDPSKLLLAYETGLVVHWDLKLKRAEFRWQCSEPI--KSVCWHYEGK-QFLCSH 366 (591)
Q Consensus 291 ~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~v--~~~~~sp~g~-~l~s~~ 366 (591)
|.. .. ..+.....+.. .+.++++++.|+.++.||.++++.+..+.....+ .-+.+..+|+ +++.++
T Consensus 452 --W~~------~~-~~~~~~~~~~t-~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~~~~~~~~p~~~~~~G~~yva~~~ 520 (668)
T 1kv9_A 452 --WKV------PY-PTHWNGGTLST-AGNLVFQGTAAGQMHAYSADKGEALWQFEAQSGIVAAPMTFELAGRQYVAIMA 520 (668)
T ss_dssp --EEE------EE-SSSCCCCEEEE-TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEEE
T ss_pred --EEc------cC-CCCCcCceeEe-CCCEEEEECCcccchhhhhhcChhheEecCCCCcccCceEEEECCEEEEEEEe
Confidence 111 00 11222223334 6788999999999999999999999887643332 2344556776 444443
No 247
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.97 E-value=1.9e-07 Score=88.31 Aligned_cols=235 Identities=8% Similarity=0.034 Sum_probs=141.5
Q ss_pred CCCcEEEeCCCCcEEEEEeCCCcEEEEcCCCceeEeecc--------------------CCcceEEEEEee-cCCEEEEe
Q psy710 8 YQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGVDAHVRHE--------------------TDAAVIQMQFLT-NEGALITA 66 (591)
Q Consensus 8 ~~v~~~~~spdg~~la~g~~dg~i~lw~~~~~~~~~~~~--------------------h~~~v~~l~~sp-~~~~l~s~ 66 (591)
....+++++++|+++.++..++.|..|+..+..+..+.. ....+..+++.+ +++ |+.+
T Consensus 19 ~~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~-l~v~ 97 (322)
T 2fp8_A 19 YAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQ-LYIV 97 (322)
T ss_dssp SCCCCEECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTE-EEEE
T ss_pred CCceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCc-EEEE
Confidence 346789999999988888889999999987554443321 113578999998 555 4444
Q ss_pred cCCCeEEEEeecccCceeeeEEE--eeccceEEEEeeC-CceEEEEEeC-----------------CCcEEEEEeeeeee
Q psy710 67 TADDSLHLWNFRQKRPEIVHSLK--FQRERITYIHLPL-QSKWLYVGTE-----------------KGNIHVVNIESFTL 126 (591)
Q Consensus 67 ~~d~~i~vw~~~~~~~~~~~~~~--~~~~~v~~~~~~~-~~~~l~~~~~-----------------d~~i~vwd~~~~~~ 126 (591)
...+.+..+|..++..+.+.... ........+++.+ +|+..++-.. ++.|..+|..+++.
T Consensus 98 d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~ 177 (322)
T 2fp8_A 98 DCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKET 177 (322)
T ss_dssp ETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEE
T ss_pred ECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEE
Confidence 44455788887654311111111 1113467888998 8876655322 25566666654432
Q ss_pred eceecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCCCCEEEEE-eCCCcEEEeCCCC-----eE
Q psy710 127 SGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIG-TKTGSLRLLGRPG-----VD 200 (591)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~i~d~~~-----~~ 200 (591)
..... .......++++|+++.|.++ +.++.|..|+..+ .+
T Consensus 178 ~~~~~----------------------------------~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~ 223 (322)
T 2fp8_A 178 TLLLK----------------------------------ELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAE 223 (322)
T ss_dssp EEEEE----------------------------------EESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEE
T ss_pred EEecc----------------------------------CCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccc
Confidence 21111 01234789999999866655 5568899998764 12
Q ss_pred EEEeccCCCcEEEEEEEcCCceEEEEeC----------CCcEEEEEccCCCcceEEeeeecc----ccEEEEEecCCCCE
Q psy710 201 AHVRHETDAAVIQMQFLTNEGALITATA----------DDSLHLWNFRQKRPEIVHSLKFQR----ERITYIHLPLQSKW 266 (591)
Q Consensus 201 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~----------d~~i~~wd~~~~~~~~~~~~~~~~----~~v~~~~~sp~~~~ 266 (591)
.... ... ...+++.++|++.++... .+.|..+|.. + +.+..+.... ..++.+++ .++++
T Consensus 224 ~~~~--~~g-P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~-G--~~~~~~~~~~g~~~~~~~~~~~-~~g~L 296 (322)
T 2fp8_A 224 VLVK--IPN-PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEF-G--NILEVIPLPPPFAGEHFEQIQE-HDGLL 296 (322)
T ss_dssp EEEE--CSS-EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTT-S--CEEEEEECCTTTTTSCCCEEEE-ETTEE
T ss_pred eEEe--CCC-CCCeEECCCCCEEEEecCcccccccCCCccEEEEECCC-C--CEEEEEECCCCCccccceEEEE-eCCEE
Confidence 2222 222 788999999986665543 3567777764 3 4555554332 34566666 35555
Q ss_pred EEEEeCCccEEEEEccCc
Q psy710 267 LYVGTEKGNIHVVNIESF 284 (591)
Q Consensus 267 l~~~~~dg~i~i~d~~~~ 284 (591)
.++...++.|..+++...
T Consensus 297 ~v~~~~~~~i~~~~~~~~ 314 (322)
T 2fp8_A 297 YIGTLFHGSVGILVYDKK 314 (322)
T ss_dssp EEECSSCSEEEEEEC---
T ss_pred EEeecCCCceEEEecccc
Confidence 555556778998887643
No 248
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.96 E-value=1.3e-07 Score=98.57 Aligned_cols=292 Identities=14% Similarity=0.166 Sum_probs=177.8
Q ss_pred CCEEEEecCCCeEEEEeecccCceeeeEEEeeccc----------e-EEEEeeCCceEEEEEeCCCcEEEEEeeeeeeec
Q psy710 60 EGALITATADDSLHLWNFRQKRPEIVHSLKFQRER----------I-TYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSG 128 (591)
Q Consensus 60 ~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~----------v-~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~ 128 (591)
+..|+.++.++.|.-+|..+++ .+..+...... + ..+++ .+..+++++.|+.|..+|..+|+.+.
T Consensus 66 ~g~vyv~~~~~~v~AlD~~tG~--~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~~W 141 (668)
T 1kv9_A 66 DGVIYTSMSWSRVIAVDAASGK--ELWRYDPEVAKVKARTSCCDAVNRGVAL--WGDKVYVGTLDGRLIALDAKTGKAIW 141 (668)
T ss_dssp TTEEEEEEGGGEEEEEETTTCC--EEEEECCCCCGGGGGGCTTCSCCCCCEE--EBTEEEEECTTSEEEEEETTTCCEEE
T ss_pred CCEEEEECCCCeEEEEECCCCh--hceEECCCCCccccccccccCCccceEE--ECCEEEEEcCCCEEEEEECCCCCEee
Confidence 4567777778899999998885 34444322110 0 11122 35678888889999999999998776
Q ss_pred eecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCCCCEEEEEeC------CCcEEEeCCCCeEEE
Q psy710 129 YIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTK------TGSLRLLGRPGVDAH 202 (591)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~------dg~i~i~d~~~~~~~ 202 (591)
......... . ......+ .+ .+..++++.. +|.|+.+|..+++..
T Consensus 142 ~~~~~~~~~-----------------------~--~~~~~~P-~v----~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~ 191 (668)
T 1kv9_A 142 SQQTTDPAK-----------------------P--YSITGAP-RV----VKGKVIIGNGGAEYGVRGFVSAYDADTGKLA 191 (668)
T ss_dssp EEECSCTTS-----------------------S--CBCCSCC-EE----ETTEEEECCBCTTTCCBCEEEEEETTTCCEE
T ss_pred eeccCCCCC-----------------------c--ceecCCC-EE----ECCEEEEeCCCCCcCCCCEEEEEECCCCcEE
Confidence 654211000 0 0001111 11 1234555443 588999999887766
Q ss_pred EeccC---C-----------------------------CcEEEEEEEcCCceEEEEeCCC-------------------c
Q psy710 203 VRHET---D-----------------------------AAVIQMQFLTNEGALITATADD-------------------S 231 (591)
Q Consensus 203 ~~~~~---~-----------------------------~~v~~~~~~~~~~~l~~~~~d~-------------------~ 231 (591)
..... . .....+++.|+...++.+..++ .
T Consensus 192 W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~ 271 (668)
T 1kv9_A 192 WRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSS 271 (668)
T ss_dssp EEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTE
T ss_pred EEecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeee
Confidence 43321 0 0112468888888888887765 3
Q ss_pred EEEEEccCCCcceEEeeee--cc-------ccEEEEEecCCCC---EEEEEeCCccEEEEEccCccccceee----ehhh
Q psy710 232 LHLWNFRQKRPEIVHSLKF--QR-------ERITYIHLPLQSK---WLYVGTEKGNIHVVNIESFTLSGYII----NWNK 295 (591)
Q Consensus 232 i~~wd~~~~~~~~~~~~~~--~~-------~~v~~~~~sp~~~---~l~~~~~dg~i~i~d~~~~~~~~~~~----~~~~ 295 (591)
|..+|.+++ +.+..++. |. .+.....+..+|+ .++.++.+|.++++|..++++..... +|..
T Consensus 272 v~AlD~~tG--~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~ 349 (668)
T 1kv9_A 272 ILAIRPDTG--KLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAE 349 (668)
T ss_dssp EEEECTTTC--CEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEE
T ss_pred EEEEcCCCC--ceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEecccccccccccc
Confidence 889999988 55555543 21 2222222333665 68899999999999999988752110 0111
Q ss_pred hcc----c-------c--------ccCCCC--CeEEEecCCCCCCeEEEEE-----------------------------
Q psy710 296 AID----V-------C--------MKTHPG--PIIHLSDNPLDPSKLLLAY----------------------------- 325 (591)
Q Consensus 296 ~~~----~-------~--------~~~~~~--~v~~~~~sp~~~~~l~~~~----------------------------- 325 (591)
.+. . . ..+..+ .-..++++| +..+++...
T Consensus 350 ~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp-~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 428 (668)
T 1kv9_A 350 KVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNP-GTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADA 428 (668)
T ss_dssp EECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEET-TTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGC
T ss_pred ccccccCCccccccccccCCeeEECCCCccccCCCcceECC-CCCEEEEeccccceEeeeeccccccccccccCcccccc
Confidence 000 0 0 000000 011256777 555554421
Q ss_pred -------cCCEEEEEecccceEEEEeccCCCeeEEEEeecCCEEEEEecCCcEEEEecCCCCCceeeeccc
Q psy710 326 -------ETGLVVHWDLKLKRAEFRWQCSEPIKSVCWHYEGKQFLCSHTDGTISTWAVRPLAKPVSVNQPH 389 (591)
Q Consensus 326 -------~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~g~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~ 389 (591)
.+|.|..||+.+++.+-......+.....+...+.+++.++.||.++.||.+ +++.+..+...
T Consensus 429 ~~~p~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~-tG~~l~~~~~~ 498 (668)
T 1kv9_A 429 TDVPAAVVSGALLAWDPVKQKAAWKVPYPTHWNGGTLSTAGNLVFQGTAAGQMHAYSAD-KGEALWQFEAQ 498 (668)
T ss_dssp CCCCGGGCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETT-TCCEEEEEECS
T ss_pred CCCCCCCccceEEEEeCCCCcEEEEccCCCCCcCceeEeCCCEEEEECCcccchhhhhh-cChhheEecCC
Confidence 2488999999999998777765666655666788899999999999999999 78887766554
No 249
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.92 E-value=2.8e-07 Score=93.98 Aligned_cols=319 Identities=13% Similarity=0.119 Sum_probs=175.5
Q ss_pred CcEEEEEeC-CCcEEEEcC-C-CceeEeeccCCc-c---------e-EEEEEeecCCEEEEecCCCeEEEEeecccCcee
Q psy710 19 QKLLAIGTK-TGSLRLLGR-P-GVDAHVRHETDA-A---------V-IQMQFLTNEGALITATADDSLHLWNFRQKRPEI 84 (591)
Q Consensus 19 g~~la~g~~-dg~i~lw~~-~-~~~~~~~~~h~~-~---------v-~~l~~sp~~~~l~s~~~d~~i~vw~~~~~~~~~ 84 (591)
+..+.+++. ++.|.-+|. . ++++-....... . + ..++. .+..++.++.|+.+..+|..+++ .
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~--~ 137 (571)
T 2ad6_A 62 GDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAY--GAGQIVKKQANGHLLALDAKTGK--I 137 (571)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCC--E
T ss_pred CCEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEE--ECCEEEEEeCCCEEEEEECCCCC--E
Confidence 345566666 788999998 5 665544432211 0 0 11222 35678888889999999999986 3
Q ss_pred eeEEEeec--c--ceEE-EEeeCCceEEEEEeC------CCcEEEEEeeeeeeeceecccccccc----cCCCCCCCc--
Q psy710 85 VHSLKFQR--E--RITY-IHLPLQSKWLYVGTE------KGNIHVVNIESFTLSGYIINWNKAID----VCMKTHPGP-- 147 (591)
Q Consensus 85 ~~~~~~~~--~--~v~~-~~~~~~~~~l~~~~~------d~~i~vwd~~~~~~~~~~~~~~~~~~----~~~~~~~~~-- 147 (591)
+....... . .+.+ ... .++ .+++++. ++.|+.+|..+|+.+..+........ +....+...
T Consensus 138 ~W~~~~~~~~~~~~~~~~P~v-~~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G 215 (571)
T 2ad6_A 138 NWEVEVCDPKVGSTLTQAPFV-AKD-TVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYG 215 (571)
T ss_dssp EEEEECCCGGGTCBCCSCCEE-ETT-EEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGC
T ss_pred EEEecCCCCCccceeccCCEE-ECC-EEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCccccccCccccccccccc
Confidence 33333211 0 1111 111 134 4555544 78999999999988776653221100 000000000
Q ss_pred -----eeccCCCCcCcceeeeccCCCCceEEEECCCCCEEEEEeCC----------------CcEEEeCCCCeEEEEecc
Q psy710 148 -----IIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTKT----------------GSLRLLGRPGVDAHVRHE 206 (591)
Q Consensus 148 -----~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----------------g~i~i~d~~~~~~~~~~~ 206 (591)
...|..+ ....+-...-..++++++...++.++.+ +.|..+|..+++.....+
T Consensus 216 ~~~~g~~~w~~~------~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~ 289 (571)
T 2ad6_A 216 QFGLGTKTWEGD------AWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQ 289 (571)
T ss_dssp CSSHHHHTSSTT------GGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEE
T ss_pred ccccccccCccc------ceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEec
Confidence 0000000 0000111111345677766677766642 258888988877664332
Q ss_pred C-----------CCcEEEEEEEcCCc---eEEEEeCCCcEEEEEccCCCcceEEeeeecc-------------ccE----
Q psy710 207 T-----------DAAVIQMQFLTNEG---ALITATADDSLHLWNFRQKRPEIVHSLKFQR-------------ERI---- 255 (591)
Q Consensus 207 ~-----------~~~v~~~~~~~~~~---~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~-------------~~v---- 255 (591)
. ..++ -+....+|+ .++.++.+|.++++|..++ +.+....... .++
T Consensus 290 ~~~~d~~d~~~~~~p~-l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG--~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~ 366 (571)
T 2ad6_A 290 KTPHDEWDFAGVNQMV-LTDQPVNGKMTPLLSHIDRNGILYTLNRENG--NLIVAEKVDPAVNVFKKVDLKTGTPVRDPE 366 (571)
T ss_dssp SSTTCSSCCCCCCCCE-EEEEEETTEEEEEEEEECTTSEEEEEETTTC--CEEEEEESSTTCCSEEEECTTTCSEEECGG
T ss_pred CCCCcccccccCCCCE-EEecccCCcEEEEEEEeCCCcEEEEEECCCC--CEEeeecccCCccccccccccCCceecccc
Confidence 1 1111 122234674 5677888999999999988 4544433211 111
Q ss_pred ----------------------EEEEecCCCCEEEEEeC-------------------------------------CccE
Q psy710 256 ----------------------TYIHLPLQSKWLYVGTE-------------------------------------KGNI 276 (591)
Q Consensus 256 ----------------------~~~~~sp~~~~l~~~~~-------------------------------------dg~i 276 (591)
..++++|+..++++... +|.|
T Consensus 367 ~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l 446 (571)
T 2ad6_A 367 FATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQI 446 (571)
T ss_dssp GCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEE
T ss_pred cCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeE
Confidence 23577888777776642 4678
Q ss_pred EEEEccCccccceeeehhhhccccccCCCCCeEEEecCCCCCCeEEEEEcCCEEEEEecccceEEEEeccCCCe--eEEE
Q psy710 277 HVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKLLLAYETGLVVHWDLKLKRAEFRWQCSEPI--KSVC 354 (591)
Q Consensus 277 ~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~v--~~~~ 354 (591)
..||+.+++.. |.. .. ...+....+.. .+..++.++.|+.|+.+|.++++.+..+.....+ .-+.
T Consensus 447 ~a~D~~tG~~~-----W~~----~~---~~~~~~~~~~t-~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~ 513 (571)
T 2ad6_A 447 RAFDLTTGKAK-----WTK----WE---KFAAWGGTLYT-KGGLVWYATLDGYLKALDNKDGKELWNFKMPSGGIGSPMT 513 (571)
T ss_dssp EEECTTTCCEE-----EEE----EE---SSCCCSBCEEE-TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEE
T ss_pred EEEECCCCCEE-----EEe----cC---CCCccceeEEE-CCCEEEEEcCCCeEEEEECCCCCEEEEEeCCCCcEeeeEE
Confidence 88888877653 110 00 11111122222 4678888999999999999999999887743333 2344
Q ss_pred EeecCCEEEEE
Q psy710 355 WHYEGKQFLCS 365 (591)
Q Consensus 355 ~sp~g~~l~s~ 365 (591)
+..+|+.++..
T Consensus 514 ~~~~G~~yv~~ 524 (571)
T 2ad6_A 514 YSFKGKQYIGS 524 (571)
T ss_dssp EEETTEEEEEE
T ss_pred EEECCEEEEEE
Confidence 55788755443
No 250
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.90 E-value=4e-07 Score=92.84 Aligned_cols=291 Identities=11% Similarity=0.060 Sum_probs=171.3
Q ss_pred CCEEEEecC-CCeEEEEee-cccCceeeeEEEeecc-ce----------EEEEeeCCceEEEEEeCCCcEEEEEeeeeee
Q psy710 60 EGALITATA-DDSLHLWNF-RQKRPEIVHSLKFQRE-RI----------TYIHLPLQSKWLYVGTEKGNIHVVNIESFTL 126 (591)
Q Consensus 60 ~~~l~s~~~-d~~i~vw~~-~~~~~~~~~~~~~~~~-~v----------~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~ 126 (591)
+..++.++. ++.|.-+|. .+++ .+..+..... .+ ..+++ ++..+++++.|+.+..+|..+|+.
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~--~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~ 137 (571)
T 2ad6_A 62 GDMMYVHSAFPNNTYALNLNDPGK--IVWQHKPKQDASTKAVMCCDVVDRGLAY--GAGQIVKKQANGHLLALDAKTGKI 137 (571)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTS--EEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCE
T ss_pred CCEEEEEeCCCCEEEEEeCCCCcc--EEEEEcCCCCccccccccccccccccEE--ECCEEEEEeCCCEEEEEECCCCCE
Confidence 445666666 788899998 7885 3433332211 00 11222 356778888899999999999887
Q ss_pred eceecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCCCCEEEEEeC------CCcEEEeCCCCeE
Q psy710 127 SGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTK------TGSLRLLGRPGVD 200 (591)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~------dg~i~i~d~~~~~ 200 (591)
+.......... .......+ .. .+..+++++. ++.|+.+|..+++
T Consensus 138 ~W~~~~~~~~~-------------------------~~~~~~~P---~v--~~g~v~vg~~~~~~~~~g~v~a~D~~tG~ 187 (571)
T 2ad6_A 138 NWEVEVCDPKV-------------------------GSTLTQAP---FV--AKDTVLMGCSGAELGVRGAVNAFDLKTGE 187 (571)
T ss_dssp EEEEECCCGGG-------------------------TCBCCSCC---EE--ETTEEEEECBCGGGTCCCEEEEEETTTCC
T ss_pred EEEecCCCCCc-------------------------cceeccCC---EE--ECCEEEEEecCCccCCCCEEEEEECCCCc
Confidence 66543111000 00000101 11 1334556554 7899999998877
Q ss_pred EEEeccCCCcE---------------------------------------EEEEEEcCCceEEEEeCC------------
Q psy710 201 AHVRHETDAAV---------------------------------------IQMQFLTNEGALITATAD------------ 229 (591)
Q Consensus 201 ~~~~~~~~~~v---------------------------------------~~~~~~~~~~~l~~~~~d------------ 229 (591)
........... ..+++.++...++.+..+
T Consensus 188 ~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd 267 (571)
T 2ad6_A 188 LKWRAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGD 267 (571)
T ss_dssp EEEEEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSC
T ss_pred EEEEEccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCC
Confidence 66433221110 235677776777776532
Q ss_pred ----CcEEEEEccCCCcceEEeeeec----------cccEEEEEecCCCC---EEEEEeCCccEEEEEccCccccceee-
Q psy710 230 ----DSLHLWNFRQKRPEIVHSLKFQ----------RERITYIHLPLQSK---WLYVGTEKGNIHVVNIESFTLSGYII- 291 (591)
Q Consensus 230 ----~~i~~wd~~~~~~~~~~~~~~~----------~~~v~~~~~sp~~~---~l~~~~~dg~i~i~d~~~~~~~~~~~- 291 (591)
+.|..+|.+++ +.+..++.. ..++. +...++|+ .++.++.+|.++++|..+++..-...
T Consensus 268 ~~y~~~v~Ald~~tG--~~~W~~~~~~~d~~d~~~~~~p~l-~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~ 344 (571)
T 2ad6_A 268 NKWTMTIWGRDLDTG--MAKWGYQKTPHDEWDFAGVNQMVL-TDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKV 344 (571)
T ss_dssp CTTTTEEEEEETTTC--CEEEEEESSTTCSSCCCCCCCCEE-EEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEES
T ss_pred ceeEEEEEEEecCCC--cEEEEecCCCCcccccccCCCCEE-EecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecc
Confidence 25889999988 455554421 12221 22224674 67788999999999999887642110
Q ss_pred ----ehhhhcc----c-----------------cccCCCC--CeEEEecCCCCCCeEEEEE-------------------
Q psy710 292 ----NWNKAID----V-----------------CMKTHPG--PIIHLSDNPLDPSKLLLAY------------------- 325 (591)
Q Consensus 292 ----~~~~~~~----~-----------------~~~~~~~--~v~~~~~sp~~~~~l~~~~------------------- 325 (591)
+|...+. . ...+..+ .-..++++| +..++++..
T Consensus 345 ~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp-~~g~~yv~~~~~~~~~~~~~~~~~~g~~ 423 (571)
T 2ad6_A 345 DPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDP-ESRTLYAGLNHICMDWEPFMLPYRAGQF 423 (571)
T ss_dssp STTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEET-TTTEEEEEEECEEEEEEECCCCCCTTSC
T ss_pred cCCccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECC-CCCEEEEEchhccccccccccccccCCc
Confidence 0000000 0 0000000 002456777 666666643
Q ss_pred ------------------cCCEEEEEecccceEEEEeccCCCeeEEEEeecCCEEEEEecCCcEEEEecCCCCCceeeec
Q psy710 326 ------------------ETGLVVHWDLKLKRAEFRWQCSEPIKSVCWHYEGKQFLCSHTDGTISTWAVRPLAKPVSVNQ 387 (591)
Q Consensus 326 ------------------~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~g~~l~s~~~dg~i~vwd~~~~~~~~~~~~ 387 (591)
.++.|..||..+++.+..+.....+........+..++.++.||.|+.+|.+ +++.+..+.
T Consensus 424 ~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~-tG~~lw~~~ 502 (571)
T 2ad6_A 424 FVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKFAAWGGTLYTKGGLVWYATLDGYLKALDNK-DGKELWNFK 502 (571)
T ss_dssp CCCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEEECTTSEEEEEETT-TCCEEEEEE
T ss_pred cccccceeccCccccCCCCCCeEEEEECCCCCEEEEecCCCCccceeEEECCCEEEEEcCCCeEEEEECC-CCCEEEEEe
Confidence 3578999999999988877755555554455566778889999999999998 788877665
Q ss_pred cc
Q psy710 388 PH 389 (591)
Q Consensus 388 ~~ 389 (591)
..
T Consensus 503 ~~ 504 (571)
T 2ad6_A 503 MP 504 (571)
T ss_dssp CS
T ss_pred CC
Confidence 44
No 251
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.90 E-value=3.1e-07 Score=82.33 Aligned_cols=193 Identities=9% Similarity=0.068 Sum_probs=129.8
Q ss_pred ceEEEEEeecCCEEEEecC--CCeEEEEeecccCceeeeEEEeecc-ceEEEEeeCCceEEEEEe-CCCcEEEEEeeeee
Q psy710 50 AVIQMQFLTNEGALITATA--DDSLHLWNFRQKRPEIVHSLKFQRE-RITYIHLPLQSKWLYVGT-EKGNIHVVNIESFT 125 (591)
Q Consensus 50 ~v~~l~~sp~~~~l~s~~~--d~~i~vw~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~-~d~~i~vwd~~~~~ 125 (591)
....++|+|++.+.++.+. ++.|++.|+.+++ .+..+..... ....+++. ++.|+.+. .++.+.++|..+++
T Consensus 22 f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~--v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~~ 97 (266)
T 2iwa_A 22 FTQGLVYAENDTLFESTGLYGRSSVRQVALQTGK--VENIHKMDDSYFGEGLTLL--NEKLYQVVWLKNIGFIYDRRTLS 97 (266)
T ss_dssp CEEEEEECSTTEEEEEECSTTTCEEEEEETTTCC--EEEEEECCTTCCEEEEEEE--TTEEEEEETTCSEEEEEETTTTE
T ss_pred CcccEEEeCCCeEEEECCCCCCCEEEEEECCCCC--EEEEEecCCCcceEEEEEe--CCEEEEEEecCCEEEEEECCCCc
Confidence 4689999998755555443 6899999999985 4555442221 22344444 54555554 57899999999988
Q ss_pred eeceecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCCCCEEEEEeCCCcEEEeCCCCeEEEEec
Q psy710 126 LSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGVDAHVRH 205 (591)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~ 205 (591)
.+..+.. + .. ....+++|++.++++..++.|.++|..+.+.....
T Consensus 98 v~~~i~~--------------------------------g-~~--~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I 142 (266)
T 2iwa_A 98 NIKNFTH--------------------------------Q-MK--DGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKH 142 (266)
T ss_dssp EEEEEEC--------------------------------C-SS--SCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEE
T ss_pred EEEEEEC--------------------------------C-CC--CeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEE
Confidence 7766541 1 01 12335567777777777899999999887655433
Q ss_pred cC------CCcEEEEEEEcCCceEEEEeCCCcEEEEEccCCCcceEEeeeecc-------------ccEEEEEecCCCCE
Q psy710 206 ET------DAAVIQMQFLTNEGALITATADDSLHLWNFRQKRPEIVHSLKFQR-------------ERITYIHLPLQSKW 266 (591)
Q Consensus 206 ~~------~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~-------------~~v~~~~~sp~~~~ 266 (591)
.- -...+.+.|. ++..++....++.|.+.|..++ +.+..+.... .....++++|+++.
T Consensus 143 ~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V~vID~~tg--~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~ 219 (266)
T 2iwa_A 143 NVKYNGHRVIRLNELEYI-NGEVWANIWQTDCIARISAKDG--TLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKR 219 (266)
T ss_dssp ECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEEETTTC--CEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTE
T ss_pred EECCCCcccccceeEEEE-CCEEEEecCCCCeEEEEECCCC--cEEEEEECCCcccccccccccccCceEEEEEcCCCCE
Confidence 22 1246788888 7755555556789999999998 5666665321 25689999999876
Q ss_pred EEE-EeCCccEEEEEccCc
Q psy710 267 LYV-GTEKGNIHVVNIESF 284 (591)
Q Consensus 267 l~~-~~~dg~i~i~d~~~~ 284 (591)
+++ +...+++...++...
T Consensus 220 lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 220 IFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp EEEEETTCSEEEEEEEEEC
T ss_pred EEEECCCCCeEEEEEEecc
Confidence 655 446678888887764
No 252
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.89 E-value=2.5e-07 Score=82.91 Aligned_cols=192 Identities=11% Similarity=0.069 Sum_probs=130.1
Q ss_pred CCceEEEECCCCCEEEEEeC--CCcEEEeCCCCeEEEEeccC--CCcEEEEEEEcCCceEE-EEeCCCcEEEEEccCCCc
Q psy710 168 YQPTAIAFDPIQKLLAIGTK--TGSLRLLGRPGVDAHVRHET--DAAVIQMQFLTNEGALI-TATADDSLHLWNFRQKRP 242 (591)
Q Consensus 168 ~~v~~~~~~~~~~~l~~~~~--dg~i~i~d~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~-~~~~d~~i~~wd~~~~~~ 242 (591)
.....++|++++.+.++.+. ++.|.++|..+++....... ......+++. ++.|+ +.-.++.+.++|..+.
T Consensus 21 ~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~-- 96 (266)
T 2iwa_A 21 AFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKNIGFIYDRRTL-- 96 (266)
T ss_dssp CCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCSEEEEEETTTT--
T ss_pred CCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecCCEEEEEECCCC--
Confidence 34579999998754444443 68999999999887765432 1223345554 44554 4456789999999987
Q ss_pred ceEEeeeec-cccEEEEEecCCCCEEEEEeCCccEEEEEccCccccceeeehhhhccccccCC---CCCeEEEecCCCCC
Q psy710 243 EIVHSLKFQ-RERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTH---PGPIIHLSDNPLDP 318 (591)
Q Consensus 243 ~~~~~~~~~-~~~v~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~---~~~v~~~~~sp~~~ 318 (591)
+.+..+... ... ..+++||+.++++..++.|.++|..+.+..... ....+ -..++.+.|. ++
T Consensus 97 ~v~~~i~~g~~~g---~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I---------~Vg~~~~p~~~~nele~~--dg 162 (266)
T 2iwa_A 97 SNIKNFTHQMKDG---WGLATDGKILYGSDGTSILYEIDPHTFKLIKKH---------NVKYNGHRVIRLNELEYI--NG 162 (266)
T ss_dssp EEEEEEECCSSSC---CEEEECSSSEEEECSSSEEEEECTTTCCEEEEE---------ECEETTEECCCEEEEEEE--TT
T ss_pred cEEEEEECCCCCe---EEEEECCCEEEEECCCCeEEEEECCCCcEEEEE---------EECCCCcccccceeEEEE--CC
Confidence 677777543 222 335568888888888889999999987764211 11111 1235677776 34
Q ss_pred CeEEEEEcCCEEEEEecccceEEEEeccC--------------CCeeEEEEeecCCEE-EEEecCCcEEEEecC
Q psy710 319 SKLLLAYETGLVVHWDLKLKRAEFRWQCS--------------EPIKSVCWHYEGKQF-LCSHTDGTISTWAVR 377 (591)
Q Consensus 319 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~--------------~~v~~~~~sp~g~~l-~s~~~dg~i~vwd~~ 377 (591)
...+....++.|.+.|..++++...+.-. ...+.++|+|+++.| +++...+.|.+-++.
T Consensus 163 ~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~ 236 (266)
T 2iwa_A 163 EVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLH 236 (266)
T ss_dssp EEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEE
T ss_pred EEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEe
Confidence 44444445789999999999998887621 356899999998755 455577888888887
No 253
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.84 E-value=1.8e-06 Score=87.89 Aligned_cols=319 Identities=11% Similarity=0.120 Sum_probs=174.9
Q ss_pred CcEEEEEeC-CCcEEEEcC-C-CceeEeeccCCc-----------ceEEEEEeecCCE----EEEecCCCeEEEEeeccc
Q psy710 19 QKLLAIGTK-TGSLRLLGR-P-GVDAHVRHETDA-----------AVIQMQFLTNEGA----LITATADDSLHLWNFRQK 80 (591)
Q Consensus 19 g~~la~g~~-dg~i~lw~~-~-~~~~~~~~~h~~-----------~v~~l~~sp~~~~----l~s~~~d~~i~vw~~~~~ 80 (591)
+..|.+++. ++.|.-+|. . ++++-....... ....++++|.+.. |+.++.|+.+.-+|..++
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG 141 (599)
T 1w6s_A 62 DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAETG 141 (599)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTTC
T ss_pred CCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECCCC
Confidence 345666666 788999998 5 666554432211 0123556555545 888888999999999998
Q ss_pred CceeeeEEEeec--c--ceEE-EEeeCCceEEEEEe------CCCcEEEEEeeeeeeeceecccccccccCCCCCCCc--
Q psy710 81 RPEIVHSLKFQR--E--RITY-IHLPLQSKWLYVGT------EKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGP-- 147 (591)
Q Consensus 81 ~~~~~~~~~~~~--~--~v~~-~~~~~~~~~l~~~~------~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 147 (591)
+ .+....... . .+.+ ..+ .++ .+++++ .++.|+.+|..+|+.+..+............++...
T Consensus 142 ~--~~W~~~~~~~~~~~~~~ssP~v-~~g-~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~ 217 (599)
T 1w6s_A 142 E--TVWKVENSDIKVGSTLTIAPYV-VKD-KVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKN 217 (599)
T ss_dssp C--EEEEEECCCGGGTCBCCSCCEE-ETT-EEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTC
T ss_pred C--EEEeecCCCCCccceeecCCEE-ECC-EEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCcccccccccccccc
Confidence 6 333332211 0 1111 111 144 445544 378999999999988766553221100000000000
Q ss_pred ---------eeccCCCCcCcceeeeccCCCCceEEEECCCCCEEEEEeCCC----------------cEEEeCCCCeEEE
Q psy710 148 ---------IIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTKTG----------------SLRLLGRPGVDAH 202 (591)
Q Consensus 148 ---------~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg----------------~i~i~d~~~~~~~ 202 (591)
...+..+ ....+-...=..++++++..+++.++.++ .|..+|..+++..
T Consensus 218 ~~~g~~~~g~~tw~g~------~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~ 291 (599)
T 1w6s_A 218 PHYGQKGLGTGTWEGD------AWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAK 291 (599)
T ss_dssp GGGCCTTHHHHTSSTT------GGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEE
T ss_pred ccccccccccccCCCc------ceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCcee
Confidence 0011100 00111111112456777777788777653 7888898888776
Q ss_pred EeccCC-----------CcEEEEEEE-cCC---ceEEEEeCCCcEEEEEccCCCcceEEeeeecc-------------cc
Q psy710 203 VRHETD-----------AAVIQMQFL-TNE---GALITATADDSLHLWNFRQKRPEIVHSLKFQR-------------ER 254 (591)
Q Consensus 203 ~~~~~~-----------~~v~~~~~~-~~~---~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~-------------~~ 254 (591)
-..+.. .++. +... .+| +.++.++.+|.++++|.+++ +.+....... .+
T Consensus 292 W~~q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG--~~lw~~~~~~~~~~~~~~~~~~g~p 368 (599)
T 1w6s_A 292 FGYQKTPHDEWDYAGVNVMML-SEQKDKDGKARKLLTHPDRNGIVYTLDRTDG--ALVSANKLDDTVNVFKSVDLKTGQP 368 (599)
T ss_dssp EEEESSTTCSSCCCCCCCCEE-EEEECTTSCEEEEEEEECTTSEEEEEETTTC--CEEEEEESSTTCCSEEEECTTTCCE
T ss_pred eEeecCCCccccccCCCccEE-EeccccCCcEEEEEEEECCCcEEEEEECCCC--CEeecccccCCcccccccccCCCce
Confidence 433221 1111 2222 467 46777889999999999988 4444433110 11
Q ss_pred E--------------------------EEEEecCCCCEEEEEe-------------------------------------
Q psy710 255 I--------------------------TYIHLPLQSKWLYVGT------------------------------------- 271 (591)
Q Consensus 255 v--------------------------~~~~~sp~~~~l~~~~------------------------------------- 271 (591)
+ ..++++|+..++++..
T Consensus 369 ~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~p~~~~~~ 448 (599)
T 1w6s_A 369 VRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYPGPKGDRQN 448 (599)
T ss_dssp EECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSBTTT
T ss_pred eeccccCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccCCcceecccceeccCCcCCccc
Confidence 1 1356777766665542
Q ss_pred --CCccEEEEEccCccccceeeehhhhccccccCCCCCeEEEecCCCCCCeEEEEEcCCEEEEEecccceEEEEeccCCC
Q psy710 272 --EKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKLLLAYETGLVVHWDLKLKRAEFRWQCSEP 349 (591)
Q Consensus 272 --~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~ 349 (591)
.+|.+..||+.+++.. |.... ......+. ... .+.+++.++.|+.++.||.++++.+..+.....
T Consensus 449 ~~~~G~l~A~D~~tG~~~-----W~~~~--~~~~~~g~-----~~t-agg~vf~gt~dg~l~A~D~~tG~~lW~~~l~~g 515 (599)
T 1w6s_A 449 YEGLGQIKAYNAITGDYK-----WEKME--RFAVWGGT-----MAT-AGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSG 515 (599)
T ss_dssp TBCCEEEEEECTTTCCEE-----EEEEE--SSCCCSBC-----EEE-TTTEEEEECTTSEEEEEETTTCCEEEEEECSSC
T ss_pred CCCcCeEEEEECCCCCEE-----eEecC--CCCccCcc-----eEe-cCCEEEEECCCCeEEEEECCCCCEEEEeeCCCC
Confidence 2356777777766542 11100 00011111 112 567888899999999999999999987763322
Q ss_pred e--eEEEEeecCCEEE
Q psy710 350 I--KSVCWHYEGKQFL 363 (591)
Q Consensus 350 v--~~~~~sp~g~~l~ 363 (591)
+ .-+.+..+|++.+
T Consensus 516 ~~~~P~~y~~~G~qyv 531 (599)
T 1w6s_A 516 AIGYPMTYTHKGTQYV 531 (599)
T ss_dssp CCSCCEEEEETTEEEE
T ss_pred cEeccEEEEeCCEEEE
Confidence 2 2355666776433
No 254
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.83 E-value=2.4e-06 Score=86.97 Aligned_cols=293 Identities=11% Similarity=0.021 Sum_probs=169.9
Q ss_pred CCEEEEecC-CCeEEEEee-cccCceeeeEEEeeccc-----------eEEEEeeCCceE----EEEEeCCCcEEEEEee
Q psy710 60 EGALITATA-DDSLHLWNF-RQKRPEIVHSLKFQRER-----------ITYIHLPLQSKW----LYVGTEKGNIHVVNIE 122 (591)
Q Consensus 60 ~~~l~s~~~-d~~i~vw~~-~~~~~~~~~~~~~~~~~-----------v~~~~~~~~~~~----l~~~~~d~~i~vwd~~ 122 (591)
+..|+.++. ++.|.-+|. .+++ .+..+...... ...++++|.+.. +++++.|+.|..+|..
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~--~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~ 139 (599)
T 1w6s_A 62 DGKMYIHTSFPNNTFALGLDDPGT--ILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAE 139 (599)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTS--EEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETT
T ss_pred CCEEEEEeCCCCEEEEEeCCCCCc--EEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECC
Confidence 456666666 788888898 7875 34333322110 122445444444 8888889999999999
Q ss_pred eeeeeceecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCCCCEEEEEe------CCCcEEEeCC
Q psy710 123 SFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGT------KTGSLRLLGR 196 (591)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~------~dg~i~i~d~ 196 (591)
+|+.+.......... .......+ .+ . ++ .+++++ .+|.|+-+|.
T Consensus 140 TG~~~W~~~~~~~~~-------------------------~~~~~ssP-~v--~-~g-~V~vg~~g~e~g~~g~v~A~D~ 189 (599)
T 1w6s_A 140 TGETVWKVENSDIKV-------------------------GSTLTIAP-YV--V-KD-KVIIGSSGAELGVRGYLTAYDV 189 (599)
T ss_dssp TCCEEEEEECCCGGG-------------------------TCBCCSCC-EE--E-TT-EEEECCBCGGGTCCCEEEEEET
T ss_pred CCCEEEeecCCCCCc-------------------------cceeecCC-EE--E-CC-EEEEEecccccCCCCeEEEEEC
Confidence 988765543111000 00001111 11 1 33 455554 3789999999
Q ss_pred CCeEEEEeccCCCcE---------------------------------------EEEEEEcCCceEEEEeCC--------
Q psy710 197 PGVDAHVRHETDAAV---------------------------------------IQMQFLTNEGALITATAD-------- 229 (591)
Q Consensus 197 ~~~~~~~~~~~~~~v---------------------------------------~~~~~~~~~~~l~~~~~d-------- 229 (591)
.+++..-......+. ..+++.++...++.+..+
T Consensus 190 ~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~ 269 (599)
T 1w6s_A 190 KTGEQVWRAYATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETM 269 (599)
T ss_dssp TTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGG
T ss_pred CCCcEEEEEcCCCCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcc
Confidence 888776433221111 135677777788887665
Q ss_pred --------CcEEEEEccCCCcceEEeeeecc----------ccEEEEEec-CCC---CEEEEEeCCccEEEEEccCcccc
Q psy710 230 --------DSLHLWNFRQKRPEIVHSLKFQR----------ERITYIHLP-LQS---KWLYVGTEKGNIHVVNIESFTLS 287 (591)
Q Consensus 230 --------~~i~~wd~~~~~~~~~~~~~~~~----------~~v~~~~~s-p~~---~~l~~~~~dg~i~i~d~~~~~~~ 287 (591)
+.|..+|.+++ +.+..++... .++. +... .+| +.++.++.+|.++++|..+++..
T Consensus 270 r~gd~~y~~sv~Ald~~TG--~~~W~~q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l 346 (599)
T 1w6s_A 270 RPGDNKWTMTIFGRDADTG--EAKFGYQKTPHDEWDYAGVNVMML-SEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALV 346 (599)
T ss_dssp SCSCCTTSSEEEEEETTTC--CEEEEEESSTTCSSCCCCCCCCEE-EEEECTTSCEEEEEEEECTTSEEEEEETTTCCEE
T ss_pred cCCCccccceEEEEeCCCC--ceeeEeecCCCccccccCCCccEE-EeccccCCcEEEEEEEECCCcEEEEEECCCCCEe
Confidence 37899999988 4555544321 1121 2222 467 56778899999999999998764
Q ss_pred ceee-----ehhhhcc-cc--------c---cCCCC-----------CeEEEecCCCCCCeEEEEE--------------
Q psy710 288 GYII-----NWNKAID-VC--------M---KTHPG-----------PIIHLSDNPLDPSKLLLAY-------------- 325 (591)
Q Consensus 288 ~~~~-----~~~~~~~-~~--------~---~~~~~-----------~v~~~~~sp~~~~~l~~~~-------------- 325 (591)
-... +|...+. .. . ..+.. .-..++++| +.+++++..
T Consensus 347 w~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp-~~~~~yv~~~~~~~~~~~~~~~~ 425 (599)
T 1w6s_A 347 SANKLDDTVNVFKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDP-KRELFFMGINHICMDWEPFMLPY 425 (599)
T ss_dssp EEEESSTTCCSEEEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEET-TTTEEEEEEECEEEEEEECCCCC
T ss_pred ecccccCCcccccccccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCC-CCCEEEEeccccceeeecccccc
Confidence 2110 0000000 00 0 00000 012345666 545444321
Q ss_pred -------------------------cCCEEEEEecccceEEEEeccCCCeeEEEEeecCCEEEEEecCCcEEEEecCCCC
Q psy710 326 -------------------------ETGLVVHWDLKLKRAEFRWQCSEPIKSVCWHYEGKQFLCSHTDGTISTWAVRPLA 380 (591)
Q Consensus 326 -------------------------~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~g~~l~s~~~dg~i~vwd~~~~~ 380 (591)
.+|.+..||+.+++.+-......+...-.....+.+++.++.||.++.||.+ ++
T Consensus 426 ~~g~~~~g~~~~~~~~p~~~~~~~~~~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagg~vf~gt~dg~l~A~D~~-tG 504 (599)
T 1w6s_A 426 KAGQFFVGATLNMYPGPKGDRQNYEGLGQIKAYNAITGDYKWEKMERFAVWGGTMATAGDLVFYGTLDGYLKARDSD-TG 504 (599)
T ss_dssp CTTSCCCCEEEEEEECTTSBTTTTBCCEEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEEECTTSEEEEEETT-TC
T ss_pred cCCcceecccceeccCCcCCcccCCCcCeEEEEECCCCCEEeEecCCCCccCcceEecCCEEEEECCCCeEEEEECC-CC
Confidence 3478999999999988777644444332334467778889999999999999 78
Q ss_pred Cceeeeccc
Q psy710 381 KPVSVNQPH 389 (591)
Q Consensus 381 ~~~~~~~~~ 389 (591)
+.+-.++..
T Consensus 505 ~~lW~~~l~ 513 (599)
T 1w6s_A 505 DLLWKFKIP 513 (599)
T ss_dssp CEEEEEECS
T ss_pred CEEEEeeCC
Confidence 887766443
No 255
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.83 E-value=2e-07 Score=97.45 Aligned_cols=272 Identities=8% Similarity=-0.081 Sum_probs=156.7
Q ss_pred EEEEee-cCCEEEEecCCC-----------eEEEEeecccCceeeeEEEee-ccceEEEEeeCCceEEEEEeC-CCcEEE
Q psy710 53 QMQFLT-NEGALITATADD-----------SLHLWNFRQKRPEIVHSLKFQ-RERITYIHLPLQSKWLYVGTE-KGNIHV 118 (591)
Q Consensus 53 ~l~~sp-~~~~l~s~~~d~-----------~i~vw~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~-d~~i~v 118 (591)
+.++.| +++.++.|+.+. .+.+||..+++...+..+... .....++++..+++.+++|+. +..+.+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~ 269 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSL 269 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEE
Confidence 567777 788888876542 588899988764444333222 222345677889999999985 558999
Q ss_pred EEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCCCCEEEEEe-CC-----CcEE
Q psy710 119 VNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGT-KT-----GSLR 192 (591)
Q Consensus 119 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d-----g~i~ 192 (591)
||..+.+....-.. .....-.+++..+++++++.|+ .+ ..+.
T Consensus 270 yd~~t~~W~~~~~~--------------------------------~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e 317 (656)
T 1k3i_A 270 YDSSSDSWIPGPDM--------------------------------QVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGE 317 (656)
T ss_dssp EEGGGTEEEECCCC--------------------------------SSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEE
T ss_pred ecCcCCceeECCCC--------------------------------CccccccceEEecCCeEEEEeCcccCCcccccce
Confidence 99887654332110 0111124566677899999988 34 5689
Q ss_pred EeCCCCeEEEEeccCC-CcE----EEEEEEcCCceEEEEeCC---------CcEEEEEccCCCcceEEeeeeccc-----
Q psy710 193 LLGRPGVDAHVRHETD-AAV----IQMQFLTNEGALITATAD---------DSLHLWNFRQKRPEIVHSLKFQRE----- 253 (591)
Q Consensus 193 i~d~~~~~~~~~~~~~-~~v----~~~~~~~~~~~l~~~~~d---------~~i~~wd~~~~~~~~~~~~~~~~~----- 253 (591)
+||..+.......... .+. ....+..++..++.++.+ ..+..||..+. ...........
T Consensus 318 ~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~--~w~~~~~~~~~~~~~~ 395 (656)
T 1k3i_A 318 VYSPSSKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGS--GDVKSAGKRQSNRGVA 395 (656)
T ss_dssp EEETTTTEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTT--CEEEEEEECEETTEEC
T ss_pred EeCCCCCcceeCCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCc--ceeecCCccccccccC
Confidence 9999887765532110 000 001122344555555444 35678888776 32222221111
Q ss_pred ----cEEEEEec-CCCCEEEEEeCCc-----------cEEEEEccCccccceeeehhhhccccccCCCCCeEEEecCCCC
Q psy710 254 ----RITYIHLP-LQSKWLYVGTEKG-----------NIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLD 317 (591)
Q Consensus 254 ----~v~~~~~s-p~~~~l~~~~~dg-----------~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~ 317 (591)
.-.++.+. .++++++.|+.++ .+.+||..+.+... .....+. ....-.++...| +
T Consensus 396 ~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~-------~~~~~mp-~~R~~~~~~~l~-~ 466 (656)
T 1k3i_A 396 PDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTV-------FASNGLY-FARTFHTSVVLP-D 466 (656)
T ss_dssp CCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEE-------ECTTCCS-SCCBSCEEEECT-T
T ss_pred CCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeE-------EccCCCC-CCcccCCeEECC-C
Confidence 22344443 3778888887532 56777776654321 0000111 111123445667 8
Q ss_pred CCeEEEEEcC-----------CEEEEEecccceEEEEec---cCCCeeEEEEeecCCEEEEEec
Q psy710 318 PSKLLLAYET-----------GLVVHWDLKLKRAEFRWQ---CSEPIKSVCWHYEGKQFLCSHT 367 (591)
Q Consensus 318 ~~~l~~~~~d-----------g~i~iwd~~~~~~~~~~~---~~~~v~~~~~sp~g~~l~s~~~ 367 (591)
++.++.|+.+ ..+.+||..+++....-. .........+.|+|+.++.|+.
T Consensus 467 g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~~~~~~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 467 GSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPNSIVRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp SCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred CCEEEECCcccCcCcCCCCcccceEEEcCCCCceeecCCCCCccccccHhhcCCCcEEEecCCC
Confidence 8999988754 468999999877654332 1122334556789999999985
No 256
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.80 E-value=4.6e-06 Score=78.08 Aligned_cols=237 Identities=11% Similarity=0.094 Sum_probs=137.8
Q ss_pred CCceEEEECCCCCEEEEEeCCCcEEEeCCCCeEEEEeccCCCcEEEEEEEcCCceEEEEeCCC--cEEEEEccCCCcceE
Q psy710 168 YQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGVDAHVRHETDAAVIQMQFLTNEGALITATADD--SLHLWNFRQKRPEIV 245 (591)
Q Consensus 168 ~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--~i~~wd~~~~~~~~~ 245 (591)
..+..++|+++++++++-..++.|..||..+..... .........+++.++++++++..... .|..+|..+++...+
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~~~~~-~~~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~~ 110 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGNQQIH-ATVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETL 110 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCCEEEE-EECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEE
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCCceEEE-EeCCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEEE
Confidence 457899999999977776688999999987654332 22334788999999998655543332 366677666632222
Q ss_pred EeeeeccccEEEEEecCCCCEEEEEeCCccEEEEEccCccccceeeehhhhccc-cccCCCCCeEEEecCCCCCCeEEEE
Q psy710 246 HSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDV-CMKTHPGPIIHLSDNPLDPSKLLLA 324 (591)
Q Consensus 246 ~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~~~~sp~~~~~l~~~ 324 (591)
..+. .......++..+++..+++-..++.|+.+|..+++..-.... ..... ...........+ +| +++.|+.+
T Consensus 111 ~~~~-~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~--~~~~~~~~~~~~~~pngi--s~-dg~~lyv~ 184 (306)
T 2p4o_A 111 LTLP-DAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEH--PMLARSNSESVFPAANGL--KR-FGNFLYVS 184 (306)
T ss_dssp EECT-TCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEEC--GGGSCSSTTCCSCSEEEE--EE-ETTEEEEE
T ss_pred EeCC-CccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEEC--CccccccccCCCCcCCCc--Cc-CCCEEEEE
Confidence 2221 112234555555555455444688899998765321100000 00000 111112234556 78 88766665
Q ss_pred E-cCCEEEEEeccc-ceE--EEEeccCCCeeEEEEeecCCEEEEEecCCcEEEEecCCCCCcee--eecccccccCCCCC
Q psy710 325 Y-ETGLVVHWDLKL-KRA--EFRWQCSEPIKSVCWHYEGKQFLCSHTDGTISTWAVRPLAKPVS--VNQPHIKTNKDGKL 398 (591)
Q Consensus 325 ~-~dg~i~iwd~~~-~~~--~~~~~~~~~v~~~~~sp~g~~l~s~~~dg~i~vwd~~~~~~~~~--~~~~~~~~~~~~~~ 398 (591)
. ..+.|..+++.. ++. ...+........++++++|+++++....+.|.++|.. ++... .+...
T Consensus 185 d~~~~~I~~~~~~~~g~~~~~~~~~~~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~--G~~~~~~~~~~~--------- 253 (306)
T 2p4o_A 185 NTEKMLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFDVEGNLYGATHIYNSVVRIAPD--RSTTIIAQAEQG--------- 253 (306)
T ss_dssp ETTTTEEEEEEBCTTSCBCCCEEEEESCCCSSEEEBTTCCEEEECBTTCCEEEECTT--CCEEEEECGGGT---------
T ss_pred eCCCCEEEEEEeCCCCCCCccEEEeccCCCCCeEECCCCCEEEEeCCCCeEEEECCC--CCEEEEeecccc---------
Confidence 4 478999999875 322 1222222456788999999887777777889999875 44422 22111
Q ss_pred CCCCcceEEEEeec-CCCCcEEEEECC
Q psy710 399 EQCKPIQKVEWKHS-RSGEGFVIFSGG 424 (591)
Q Consensus 399 ~~~~~i~~~~~~~~-~~~~~~~l~~g~ 424 (591)
.....+++|... ++++.+++++.+
T Consensus 254 --~~~p~~~a~~g~~~d~~~LyVt~~~ 278 (306)
T 2p4o_A 254 --VIGSTAVAFGQTEGDCTAIYVVTNG 278 (306)
T ss_dssp --CTTEEEEEECCSTTTTTEEEEEECT
T ss_pred --cCCceEEEEecccCCCCEEEEECCC
Confidence 345688888610 133344555543
No 257
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.79 E-value=4.6e-07 Score=80.07 Aligned_cols=183 Identities=13% Similarity=0.144 Sum_probs=123.3
Q ss_pred ceEEEECCCCCEEEEEeCCC--cEEEeCCCCeEEEEeccCCCcEEEEEEEcCCceEEEE-eCCCcEEEEEccCCCcceEE
Q psy710 170 PTAIAFDPIQKLLAIGTKTG--SLRLLGRPGVDAHVRHETDAAVIQMQFLTNEGALITA-TADDSLHLWNFRQKRPEIVH 246 (591)
Q Consensus 170 v~~~~~~~~~~~l~~~~~dg--~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~~wd~~~~~~~~~~ 246 (591)
...+.|+ ++.++.+.+.+| .|+.+|+++++.................++++.|+.. -.++.+.+||..+. +.+.
T Consensus 45 tqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~--~~~~ 121 (262)
T 3nol_A 45 TEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWKNGLGFVWNIRNL--RQVR 121 (262)
T ss_dssp EEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETTTC--CEEE
T ss_pred cceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEeeCCEEEEEECccC--cEEE
Confidence 4788998 677667777666 8999999999887655443344333333345555544 45789999999988 6777
Q ss_pred eeeeccccEEEEEecCCCCEEEEEeCCccEEEEEccCccccceeeehhhhccccccCCC-CCeEEEecCCCCCCeEEEEE
Q psy710 247 SLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHP-GPIIHLSDNPLDPSKLLLAY 325 (591)
Q Consensus 247 ~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~sp~~~~~l~~~~ 325 (591)
++..... ...+++|++.|+.+..+++|.++|..+.+...... ....+.. ..++.+.|. ++...+...
T Consensus 122 ti~~~~e---G~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~-------V~~~g~~~~~lNELe~~--~G~lyan~w 189 (262)
T 3nol_A 122 SFNYDGE---GWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTIT-------VTAHGEELPELNELEWV--DGEIFANVW 189 (262)
T ss_dssp EEECSSC---CCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEE-------CEETTEECCCEEEEEEE--TTEEEEEET
T ss_pred EEECCCC---ceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEE-------eccCCccccccceeEEE--CCEEEEEEc
Confidence 7765322 22333578888877777889999999887643211 0011111 334556764 455554455
Q ss_pred cCCEEEEEecccceEEEEeccC-------------CCeeEEEEeecCCEEEEEec
Q psy710 326 ETGLVVHWDLKLKRAEFRWQCS-------------EPIKSVCWHYEGKQFLCSHT 367 (591)
Q Consensus 326 ~dg~i~iwd~~~~~~~~~~~~~-------------~~v~~~~~sp~g~~l~s~~~ 367 (591)
.+..|.+.|..++++...+.-. .-.+.+||+|+++.|...+.
T Consensus 190 ~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 190 QTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp TSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred cCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 6889999999999998887621 34588999999888877765
No 258
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.78 E-value=6.2e-06 Score=77.20 Aligned_cols=229 Identities=7% Similarity=-0.052 Sum_probs=135.7
Q ss_pred cceEEEEEeecCCEEEEecCCCeEEEEeecccCceeeeEEEeeccceEEEEeeCCceEEEEEeCCC--cEEEEEeeeeee
Q psy710 49 AAVIQMQFLTNEGALITATADDSLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEKG--NIHVVNIESFTL 126 (591)
Q Consensus 49 ~~v~~l~~sp~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--~i~vwd~~~~~~ 126 (591)
.....++|+++++++++-..++.|..||.+.. ....+. ....+..+++.++++++++..... .|..++..+++.
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~---~~~~~~-~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~ 107 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGN---QQIHAT-VEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTV 107 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCC---EEEEEE-CSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCE
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCCc---eEEEEe-CCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeE
Confidence 45778999999987777667899999987653 222222 335688999999998655543322 366666666554
Q ss_pred eceecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCCCCEEEEEeCCCcEEEeCCCCe--EEEEe
Q psy710 127 SGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGV--DAHVR 204 (591)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~--~~~~~ 204 (591)
...... ........++..+++..+++-..++.|+.+|.... +....
T Consensus 108 ~~~~~~--------------------------------~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~ 155 (306)
T 2p4o_A 108 ETLLTL--------------------------------PDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLE 155 (306)
T ss_dssp EEEEEC--------------------------------TTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred EEEEeC--------------------------------CCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEE
Confidence 322110 00111244555555554554445888999987653 22211
Q ss_pred c---------cCCCcEEEEEEEcCCceEEEE-eCCCcEEEEEccC-CCcceEEeeeeccccEEEEEecCCCCEEEEEeCC
Q psy710 205 H---------ETDAAVIQMQFLTNEGALITA-TADDSLHLWNFRQ-KRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEK 273 (591)
Q Consensus 205 ~---------~~~~~v~~~~~~~~~~~l~~~-~~d~~i~~wd~~~-~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d 273 (591)
. ........+ +++++.|+.+ ...+.|..|++.. +.......+.. ......++++++|++.++....
T Consensus 156 ~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~-~~~P~gi~vd~dG~l~va~~~~ 232 (306)
T 2p4o_A 156 HPMLARSNSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVE-QTNIDDFAFDVEGNLYGATHIY 232 (306)
T ss_dssp CGGGSCSSTTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEE-SCCCSSEEEBTTCCEEEECBTT
T ss_pred CCccccccccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEec-cCCCCCeEECCCCCEEEEeCCC
Confidence 1 111234555 7888776655 4567899999875 21111111111 1345668899999876665667
Q ss_pred ccEEEEEccCccccceeeehhhhccccccCCCCCeEEEecC---CCCCCeEEEEEcC
Q psy710 274 GNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDN---PLDPSKLLLAYET 327 (591)
Q Consensus 274 g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s---p~~~~~l~~~~~d 327 (591)
+.|.+++.. ++... ...........++++|. | +++.|+.++..
T Consensus 233 ~~V~~~~~~-G~~~~---------~~~~~~~~~~p~~~a~~g~~~-d~~~LyVt~~~ 278 (306)
T 2p4o_A 233 NSVVRIAPD-RSTTI---------IAQAEQGVIGSTAVAFGQTEG-DCTAIYVVTNG 278 (306)
T ss_dssp CCEEEECTT-CCEEE---------EECGGGTCTTEEEEEECCSTT-TTTEEEEEECT
T ss_pred CeEEEECCC-CCEEE---------EeecccccCCceEEEEecccC-CCCEEEEECCC
Confidence 899999875 33210 00112223568899998 8 87877776654
No 259
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.78 E-value=4.6e-06 Score=85.12 Aligned_cols=325 Identities=13% Similarity=0.127 Sum_probs=174.2
Q ss_pred cEEEEEeCCCcEEEEcCC-CceeEeeccCCcc---------eEEEEEeecCCEEEEecCCCeEEEEeecccCceeeeEEE
Q psy710 20 KLLAIGTKTGSLRLLGRP-GVDAHVRHETDAA---------VIQMQFLTNEGALITATADDSLHLWNFRQKRPEIVHSLK 89 (591)
Q Consensus 20 ~~la~g~~dg~i~lw~~~-~~~~~~~~~h~~~---------v~~l~~sp~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~ 89 (591)
..+++++.++.|.-+|.. ++++-.+...... -..++. .+..++.++.|+.+.-+|.++++ .+....
T Consensus 69 g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~--~~~~v~~~t~dg~l~AlD~~TG~--~~W~~~ 144 (582)
T 1flg_A 69 GVIYVTASYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAI--YGDKVFFGTLDASVVALNKNTGK--VVWKKK 144 (582)
T ss_dssp TEEEEEETTTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEE--ETTEEEEEETTTEEEEEESSSCC--EEEEEE
T ss_pred CEEEEEcCCCCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEE--ECCEEEEEeCCCEEEEEECCCCC--EEeeec
Confidence 345555554448888876 6555544332211 012222 34677888889999999999986 343333
Q ss_pred eecc----ceE-EEEeeC---Cce-EEEEEe------CCCcEEEEEeeeeeeeceecccccccccCC-----CCCCCcee
Q psy710 90 FQRE----RIT-YIHLPL---QSK-WLYVGT------EKGNIHVVNIESFTLSGYIINWNKAIDVCM-----KTHPGPII 149 (591)
Q Consensus 90 ~~~~----~v~-~~~~~~---~~~-~l~~~~------~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~ 149 (591)
.... .+. ...+.. +++ .+++++ .++.|+.+|..+|+.+-..........+.. ........
T Consensus 145 ~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~~~~~~~~~p~~~~~~~~~g~~g~~ 224 (582)
T 1flg_A 145 FADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPFVEGHMGRLNGKDSTVTGDVKAP 224 (582)
T ss_dssp CSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEEESSTTCEEEETTEEEEESSCTTCT
T ss_pred CCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeecCCCccccccccCcccccccccccc
Confidence 2210 111 111111 122 555654 278999999999887765432110000000 00000000
Q ss_pred ccCCC----CcCcceeeeccCCCCceEEEECCCCCEEEEEeC--------------------C----CcEEEeCCCCeEE
Q psy710 150 HLSDN----PLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTK--------------------T----GSLRLLGRPGVDA 201 (591)
Q Consensus 150 ~~~~~----~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--------------------d----g~i~i~d~~~~~~ 201 (591)
.+..+ ..+.. ....+....-..++++|+..+++++.. | +.|.-+|..+++.
T Consensus 225 ~w~~~~~~~~g~~~-~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~ 303 (582)
T 1flg_A 225 SWPDDRNSPTGKVE-SWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEV 303 (582)
T ss_dssp TSCBCTTSTTSBCG-GGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCE
T ss_pred cCCCcccccccccc-ccccCCccccCCceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCCE
Confidence 00000 00000 000111111135778888888887763 2 5799999988887
Q ss_pred EEeccC---C----CcEEE-EEEE---cCCc---eEEEEeCCCcEEEEEccCCCcceEEeeeecc-------------cc
Q psy710 202 HVRHET---D----AAVIQ-MQFL---TNEG---ALITATADDSLHLWNFRQKRPEIVHSLKFQR-------------ER 254 (591)
Q Consensus 202 ~~~~~~---~----~~v~~-~~~~---~~~~---~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~-------------~~ 254 (591)
....+. . ..+.. +.+. .+|+ .++.++.+|.++++|.+++ +.+..+.... .+
T Consensus 304 ~W~~q~~~~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG--~~lw~~~~~~~~~~~~~~~~~~g~p 381 (582)
T 1flg_A 304 KWFYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGFFYVVDRSNG--KLQNAFPFVDNITWASHIDLKTGRP 381 (582)
T ss_dssp EEEEESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEEECTTSEEEEEETTTC--CEEEEEESSSCCCSEEEECTTTCCE
T ss_pred EEEEeCCCCCcccccCCCCcEEEeeecCCCCEEEEEEEECCCceEEEEECCCC--CEecccccccCccccccccccCCCE
Confidence 654321 0 01111 1122 4663 6788899999999999988 4554433221 00
Q ss_pred E--------------------------------EEEEecCCCCEEEEEe-------------------------------
Q psy710 255 I--------------------------------TYIHLPLQSKWLYVGT------------------------------- 271 (591)
Q Consensus 255 v--------------------------------~~~~~sp~~~~l~~~~------------------------------- 271 (591)
+ ..++++|+..++++..
T Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~p~~ 461 (582)
T 1flg_A 382 VEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMY 461 (582)
T ss_dssp EECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEESC
T ss_pred eEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcceeeecccccccCCCceeccceeecCCC
Confidence 0 1345666666665543
Q ss_pred --CCccEEEEEccCccccceeeehhhhccccccCCCCCeEEEecCCCCCCeEEEEEcCCEEEEEecccceEEEEeccCCC
Q psy710 272 --EKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKLLLAYETGLVVHWDLKLKRAEFRWQCSEP 349 (591)
Q Consensus 272 --~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~ 349 (591)
.+|.|..||+.+++.. |.... ......+. ... .+.+++.++.|+.++.||.++++.+..+.....
T Consensus 462 ~~~~G~l~A~D~~tG~~~-----W~~~~--~~~~~~g~-----~~t-agglvf~g~~dg~l~A~D~~tG~~lW~~~~~~g 528 (582)
T 1flg_A 462 DDHVGSLRAMDPVSGKVV-----WEHKE--HLPLWAGV-----LAT-AGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSG 528 (582)
T ss_dssp SSCSEEEEEECTTTCCEE-----EEEEE--SSCCCSCC-----EEE-TTTEEEEECTTSEEEEEETTTCCEEEEEECSSC
T ss_pred CCCcceEEEEECCCCCEE-----EEecC--CCCCcccc-----eEe-CCCEEEEECCCCcEEEEECCCCCEEEEecCCCC
Confidence 2577888888887653 11110 01111111 112 467888899999999999999999988875444
Q ss_pred eeE--EEEeecCCEEEE
Q psy710 350 IKS--VCWHYEGKQFLC 364 (591)
Q Consensus 350 v~~--~~~sp~g~~l~s 364 (591)
+.+ +.+..+|++.++
T Consensus 529 ~~a~P~~y~~~G~qYv~ 545 (582)
T 1flg_A 529 IVSPPITWEQDGEQYLG 545 (582)
T ss_dssp CCSCCEEEEETTEEEEE
T ss_pred cccCceEEEECCEEEEE
Confidence 443 667778874443
No 260
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.74 E-value=8.7e-06 Score=83.09 Aligned_cols=294 Identities=13% Similarity=0.087 Sum_probs=166.2
Q ss_pred CEEEEecCCCeEEEEeecccCceeeeEEEeeccc-e--------EEEEeeCCceEEEEEeCCCcEEEEEeeeeeeeceec
Q psy710 61 GALITATADDSLHLWNFRQKRPEIVHSLKFQRER-I--------TYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYII 131 (591)
Q Consensus 61 ~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~-v--------~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~ 131 (591)
..++.++.++.|.-+|..+++ .+..+...... . ..+++ .+..+++++.++.|..+|..+|+.+....
T Consensus 69 g~vyv~~~~~~v~AlD~~tG~--~~W~~~~~~~~~~~~~~~~~~~g~a~--~~~~v~~~t~dg~l~AlD~~TG~~~W~~~ 144 (582)
T 1flg_A 69 GVIYVTASYSRLFALDAKTGK--RLWTYNHRLPDDIRPCCDVVNRGAAI--YGDKVFFGTLDASVVALNKNTGKVVWKKK 144 (582)
T ss_dssp TEEEEEETTTEEEEEESSSCC--EEEEEECCCCTTCCCSSCSCCCCCEE--ETTEEEEEETTTEEEEEESSSCCEEEEEE
T ss_pred CEEEEEcCCCCEEEEECCCCc--EEEEEcCCCCcccccccccCCCccEE--ECCEEEEEeCCCEEEEEECCCCCEEeeec
Confidence 345555553448888888885 34444332211 0 11122 35567788889999999999998776544
Q ss_pred ccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEEC-CCCC-EEEEEeC------CCcEEEeCCCCeEEEE
Q psy710 132 NWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFD-PIQK-LLAIGTK------TGSLRLLGRPGVDAHV 203 (591)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~-~l~~~~~------dg~i~i~d~~~~~~~~ 203 (591)
....... ......+ .+.=. .+++ .+++++. +|.|+-+|..+++...
T Consensus 145 ~~~~~~~-------------------------~~~~~sP-~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W 198 (582)
T 1flg_A 145 FADHGAG-------------------------YTMTGAP-TIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIW 198 (582)
T ss_dssp CSCGGGT-------------------------CBCCSCC-EEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEE
T ss_pred CCCCCcC-------------------------cccccCC-EEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEe
Confidence 2110000 0000111 11111 1232 4555542 6788888888776653
Q ss_pred eccCCC------------------------------------------cEEEEEEEcCCceEEEEeC-------------
Q psy710 204 RHETDA------------------------------------------AVIQMQFLTNEGALITATA------------- 228 (591)
Q Consensus 204 ~~~~~~------------------------------------------~v~~~~~~~~~~~l~~~~~------------- 228 (591)
...... .-..+++.|+...++.+..
T Consensus 199 ~~~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~~~ 278 (582)
T 1flg_A 199 MRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWARTAK 278 (582)
T ss_dssp EEESSTTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGSCT
T ss_pred ecCCCccccccccCcccccccccccccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcccccC
Confidence 322100 0023567777777776653
Q ss_pred -------C----CcEEEEEccCCCcceEEeeee--cc--------ccEEEEEec-CCCC---EEEEEeCCccEEEEEccC
Q psy710 229 -------D----DSLHLWNFRQKRPEIVHSLKF--QR--------ERITYIHLP-LQSK---WLYVGTEKGNIHVVNIES 283 (591)
Q Consensus 229 -------d----~~i~~wd~~~~~~~~~~~~~~--~~--------~~v~~~~~s-p~~~---~l~~~~~dg~i~i~d~~~ 283 (591)
| +.|..+|.+++ +.+..++. |. .++. +... .+|+ .++.++.+|.++++|..+
T Consensus 279 gg~~~~~d~~~~~~v~AlD~~TG--~~~W~~q~~~~d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~G~l~~lD~~t 355 (582)
T 1flg_A 279 GGNPHDYDSLYTSGQVGVDPSSG--EVKWFYQHTPNDAWDFSGNNELVL-FDYKAKDGKIVKATAHADRNGFFYVVDRSN 355 (582)
T ss_dssp TSCSTTCCCTTCSEEEEECTTTC--CEEEEEESSTTCCSCCCCCCCCEE-EEEECSSSCEEEEEEEECTTSEEEEEETTT
T ss_pred CCcccccCCcccceEEEEeCCCC--CEEEEEeCCCCCcccccCCCCcEE-EeeecCCCCEEEEEEEECCCceEEEEECCC
Confidence 2 57999999988 45555442 21 1222 1221 4674 788899999999999999
Q ss_pred ccccceee-----ehhhhcc----c-----ccc---------CCCC-----------CeEEEecCCCCCCeEEEEE----
Q psy710 284 FTLSGYII-----NWNKAID----V-----CMK---------THPG-----------PIIHLSDNPLDPSKLLLAY---- 325 (591)
Q Consensus 284 ~~~~~~~~-----~~~~~~~----~-----~~~---------~~~~-----------~v~~~~~sp~~~~~l~~~~---- 325 (591)
++..-... +|...+. . .+. .... .-..++++| +..++++..
T Consensus 356 G~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp-~~g~~yv~~~~~~ 434 (582)
T 1flg_A 356 GKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQ-DTGLFYVPANHWK 434 (582)
T ss_dssp CCEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECT-TTCCEEEEEECEE
T ss_pred CCEecccccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECC-CCCEEEEechhcc
Confidence 87642110 0000000 0 000 0000 011356677 555555432
Q ss_pred -----------------------------cCCEEEEEecccceEEEEeccCCCeeEEEEeecCCEEEEEecCCcEEEEec
Q psy710 326 -----------------------------ETGLVVHWDLKLKRAEFRWQCSEPIKSVCWHYEGKQFLCSHTDGTISTWAV 376 (591)
Q Consensus 326 -----------------------------~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~g~~l~s~~~dg~i~vwd~ 376 (591)
.+|.|..||+.+++.+-......++..-.....+.+++.++.||.++.||.
T Consensus 435 ~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~g~~dg~l~A~D~ 514 (582)
T 1flg_A 435 EDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHLPLWAGVLATAGNLVFTGTGDGYFKAFDA 514 (582)
T ss_dssp EEEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESSCCCSCCEEETTTEEEEECTTSEEEEEET
T ss_pred eeeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEecCCCCCcccceEeCCCEEEEECCCCcEEEEEC
Confidence 258899999999998877665444443333345778888999999999999
Q ss_pred CCCCCceeeeccc
Q psy710 377 RPLAKPVSVNQPH 389 (591)
Q Consensus 377 ~~~~~~~~~~~~~ 389 (591)
+ +++.+-+++..
T Consensus 515 ~-tG~~lW~~~~~ 526 (582)
T 1flg_A 515 K-SGKELWKFQTG 526 (582)
T ss_dssp T-TCCEEEEEECS
T ss_pred C-CCCEEEEecCC
Confidence 9 78888776554
No 261
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.71 E-value=2.5e-06 Score=75.44 Aligned_cols=182 Identities=9% Similarity=0.043 Sum_probs=121.1
Q ss_pred cceEEEEEeecCCEEEEecCCC--eEEEEeecccCceeeeEEEeeccceEEEEeeCCceEEEEEe-CCCcEEEEEeeeee
Q psy710 49 AAVIQMQFLTNEGALITATADD--SLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGT-EKGNIHVVNIESFT 125 (591)
Q Consensus 49 ~~v~~l~~sp~~~~l~s~~~d~--~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~vwd~~~~~ 125 (591)
.-...+.|+ ++.+..+.+.+| .|+++|+++++ .+..+... .........++++.|+... .++.+.++|..+++
T Consensus 43 ~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgk--v~~~~~l~-~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~ 118 (262)
T 3nol_A 43 AFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGK--TLQQIELG-KRYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLR 118 (262)
T ss_dssp CEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCC--EEEEEECC-TTCCEEEEEEETTEEEEEESSSSEEEEEETTTCC
T ss_pred cccceEEEE-CCEEEEECCCCCCceEEEEECCCCc--EEEEEecC-CccceeEEEEeCCEEEEEEeeCCEEEEEECccCc
Confidence 345889998 666666776665 89999999985 45555433 3333333333455555555 48899999999988
Q ss_pred eeceecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCCCCEEEEEeCCCcEEEeCCCCeEEEEec
Q psy710 126 LSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGVDAHVRH 205 (591)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~ 205 (591)
.+..+.. +. ....++++++.|+....++.|.++|..+.+.....
T Consensus 119 ~~~ti~~--------------------------------~~----eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I 162 (262)
T 3nol_A 119 QVRSFNY--------------------------------DG----EGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTI 162 (262)
T ss_dssp EEEEEEC--------------------------------SS----CCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEE
T ss_pred EEEEEEC--------------------------------CC----CceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEE
Confidence 7776651 11 11223356666777666888999999887665432
Q ss_pred cC------CCcEEEEEEEcCCceEEEEeCCCcEEEEEccCCCcceEEeeeec------------cccEEEEEecCCCCEE
Q psy710 206 ET------DAAVIQMQFLTNEGALITATADDSLHLWNFRQKRPEIVHSLKFQ------------RERITYIHLPLQSKWL 267 (591)
Q Consensus 206 ~~------~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~------------~~~v~~~~~sp~~~~l 267 (591)
.- -..++.+.|. +|+..+..-.++.|.+.|.+++ +.+..+... ....+.++++|+++.|
T Consensus 163 ~V~~~g~~~~~lNELe~~-~G~lyan~w~~~~I~vIDp~tG--~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~l 239 (262)
T 3nol_A 163 TVTAHGEELPELNELEWV-DGEIFANVWQTNKIVRIDPETG--KVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRL 239 (262)
T ss_dssp ECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEECTTTC--BEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEE
T ss_pred EeccCCccccccceeEEE-CCEEEEEEccCCeEEEEECCCC--cEEEEEECCcCccccccccCcCCceEEEEEcCCCCEE
Confidence 21 1245567887 7765555556789999999988 566555432 1346899999998888
Q ss_pred EEEeCC
Q psy710 268 YVGTEK 273 (591)
Q Consensus 268 ~~~~~d 273 (591)
++.+..
T Consensus 240 fVTGK~ 245 (262)
T 3nol_A 240 FVTGKL 245 (262)
T ss_dssp EEEETT
T ss_pred EEECCC
Confidence 877653
No 262
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.71 E-value=1.4e-06 Score=77.03 Aligned_cols=180 Identities=9% Similarity=-0.035 Sum_probs=120.8
Q ss_pred cceEEEEEeecCCEEEEecCCCeEEEEeecccCceeeeEEEeeccceEEEEeeCCceEEEEEe-CCCcEEEEEeeeeeee
Q psy710 49 AAVIQMQFLTNEGALITATADDSLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGT-EKGNIHVVNIESFTLS 127 (591)
Q Consensus 49 ~~v~~l~~sp~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~vwd~~~~~~~ 127 (591)
.-...+.|+ ++.+..+.+.++.|+++|+++++ .+..+ .. .........++++.|+... .++.+.+||..+++.+
T Consensus 55 ~ftqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgk--v~~~~-l~-~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl~~~ 129 (268)
T 3nok_A 55 AFTQGLVFH-QGHFFESTGHQGTLRQLSLESAQ--PVWME-RL-GNIFAEGLASDGERLYQLTWTEGLLFTWSGMPPQRE 129 (268)
T ss_dssp CCEEEEEEE-TTEEEEEETTTTEEEECCSSCSS--CSEEE-EC-TTCCEEEEEECSSCEEEEESSSCEEEEEETTTTEEE
T ss_pred cccceEEEE-CCEEEEEcCCCCEEEEEECCCCc--EEeEE-CC-CCcceeEEEEeCCEEEEEEccCCEEEEEECCcCcEE
Confidence 345788887 35666777888999999999986 34444 22 3333322333455555554 5789999999998887
Q ss_pred ceecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCCCCEEEEEeCCCcEEEeCCCCeEEEEeccC
Q psy710 128 GYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGVDAHVRHET 207 (591)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 207 (591)
..+.. + ..-..++ ++++.|+.+..++.|.++|..+.+......-
T Consensus 130 ~ti~~--------------------------------~--~eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V 173 (268)
T 3nok_A 130 RTTRY--------------------------------S--GEGWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQV 173 (268)
T ss_dssp EEEEC--------------------------------S--SCCCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEEC
T ss_pred EEEeC--------------------------------C--CceeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEe
Confidence 77651 1 1112333 5677788777799999999988766543222
Q ss_pred ------CCcEEEEEEEcCCceEEEEeCCCcEEEEEccCCCcceEEeeeec-------------cccEEEEEecCCCCEEE
Q psy710 208 ------DAAVIQMQFLTNEGALITATADDSLHLWNFRQKRPEIVHSLKFQ-------------RERITYIHLPLQSKWLY 268 (591)
Q Consensus 208 ------~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~-------------~~~v~~~~~sp~~~~l~ 268 (591)
-..++.+.|. +|+..+..-.++.|.+.|.+++ +.+..+... ..-.+.|+++|+++.|+
T Consensus 174 ~~~g~~v~~lNeLe~~-dG~lyanvw~s~~I~vIDp~TG--~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlf 250 (268)
T 3nok_A 174 KLRGQPVELINELECA-NGVIYANIWHSSDVLEIDPATG--TVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIF 250 (268)
T ss_dssp EETTEECCCEEEEEEE-TTEEEEEETTCSEEEEECTTTC--BEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEE
T ss_pred CCCCcccccccccEEe-CCEEEEEECCCCeEEEEeCCCC--cEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEE
Confidence 1245778887 7765555556789999999988 566555432 13568999999887777
Q ss_pred EEeC
Q psy710 269 VGTE 272 (591)
Q Consensus 269 ~~~~ 272 (591)
+.+.
T Consensus 251 VTGK 254 (268)
T 3nok_A 251 MTGK 254 (268)
T ss_dssp EEET
T ss_pred EeCC
Confidence 6554
No 263
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.68 E-value=1.2e-05 Score=78.77 Aligned_cols=238 Identities=9% Similarity=-0.001 Sum_probs=137.1
Q ss_pred CCCcEEEeCC-CCcEEEEEeCCCcEEEEcCCCceeEeeccCCcceEEEEEeecCCEEEEecC-C---CeEEEEeecccCc
Q psy710 8 YQPTAIAFDP-IQKLLAIGTKTGSLRLLGRPGVDAHVRHETDAAVIQMQFLTNEGALITATA-D---DSLHLWNFRQKRP 82 (591)
Q Consensus 8 ~~v~~~~~sp-dg~~la~g~~dg~i~lw~~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~~~-d---~~i~vw~~~~~~~ 82 (591)
.....++++| ++..|.++...+.|+.+|+++..+..+.........++|++++++|+.+.. + ....+|-...+..
T Consensus 137 ~~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~~ 216 (430)
T 3tc9_A 137 GGAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRESGF 216 (430)
T ss_dssp SCCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGTS
T ss_pred CCCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCce
Confidence 3567899998 455566665557899999987666666555667889999999996666544 1 2223333333322
Q ss_pred eeeeEEEeeccceEEEEeeC-CceEEEEEeCCCcEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCccee
Q psy710 83 EIVHSLKFQRERITYIHLPL-QSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKT 161 (591)
Q Consensus 83 ~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (591)
.....+.. ......++++| ++.++++-..++.|..++..++.......
T Consensus 217 ~~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~------------------------------ 265 (430)
T 3tc9_A 217 KVITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFT------------------------------ 265 (430)
T ss_dssp CSEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEE------------------------------
T ss_pred eeeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEE------------------------------
Confidence 21123322 24457788999 55555555567889999887644311111
Q ss_pred eeccCCCCceEEEECCCCCEEE-EEeCCCcEEEeCCCC--eE-----EEEec-cC------------CCcEE-EEEEE--
Q psy710 162 FRHGFPYQPTAIAFDPIQKLLA-IGTKTGSLRLLGRPG--VD-----AHVRH-ET------------DAAVI-QMQFL-- 217 (591)
Q Consensus 162 ~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~i~i~d~~~--~~-----~~~~~-~~------------~~~v~-~~~~~-- 217 (591)
.+.......++|+|++++|. +-...+.|..++... .. ..... .. -.... .++..
T Consensus 266 --~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~ 343 (430)
T 3tc9_A 266 --IQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNP 343 (430)
T ss_dssp --CSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECG
T ss_pred --cCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccc
Confidence 11123468999999999554 445678888876543 11 11111 00 01122 34443
Q ss_pred ------cCCceEEEEeCCCcEEEEEccCCCcceEEeeeec---------c---------ccEEEEEecCC-CCEEEEEeC
Q psy710 218 ------TNEGALITATADDSLHLWNFRQKRPEIVHSLKFQ---------R---------ERITYIHLPLQ-SKWLYVGTE 272 (591)
Q Consensus 218 ------~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~---------~---------~~v~~~~~sp~-~~~l~~~~~ 272 (591)
+++.++++=...+.|+.++. .+ .+..+.+. . .....++++|+ +.++++-..
T Consensus 344 ~y~~~D~~g~lyvaD~~n~~I~~i~~-~G---~v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~ 419 (430)
T 3tc9_A 344 AYKGSSDEYDFYFCDRENHCIRILTP-QG---RVTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRE 419 (430)
T ss_dssp GGTTSSCCEEEEEEEGGGTEEEEECT-TS---EEEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGG
T ss_pred cccccCCCCeEEEEECCCcEEEEECC-CC---cEEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECC
Confidence 23444444455677888773 23 22222221 1 14788999985 554444445
Q ss_pred CccEEEEEcc
Q psy710 273 KGNIHVVNIE 282 (591)
Q Consensus 273 dg~i~i~d~~ 282 (591)
+..|+.++++
T Consensus 420 n~rIr~i~~e 429 (430)
T 3tc9_A 420 NRRIRKIGYE 429 (430)
T ss_dssp GTEEEEEEEC
T ss_pred CCeEEEEccC
Confidence 5678877653
No 264
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.64 E-value=8.4e-07 Score=92.74 Aligned_cols=276 Identities=11% Similarity=-0.055 Sum_probs=148.7
Q ss_pred cEEEeCC-CCcEEEEEeCCC-----------cEEEEcCCCceeE---ee-ccCCcceEEEEEeecCCEEEEecC-CCeEE
Q psy710 11 TAIAFDP-IQKLLAIGTKTG-----------SLRLLGRPGVDAH---VR-HETDAAVIQMQFLTNEGALITATA-DDSLH 73 (591)
Q Consensus 11 ~~~~~sp-dg~~la~g~~dg-----------~i~lw~~~~~~~~---~~-~~h~~~v~~l~~sp~~~~l~s~~~-d~~i~ 73 (591)
.++++.| +|++++.|+.+. .+.+||....... .+ ..+.....++++.++++.++.|+. +..+.
T Consensus 189 ~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~ 268 (656)
T 1k3i_A 189 AAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTS 268 (656)
T ss_dssp SEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEE
T ss_pred eeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceE
Confidence 4677777 899999987543 5788997643322 22 223333445678899999999984 56899
Q ss_pred EEeecccCceeeeEEEeeccceEEEEeeCCceEEEEEe-CC-----CcEEEEEeeeeeeeceecccccccccCCCCCCCc
Q psy710 74 LWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGT-EK-----GNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGP 147 (591)
Q Consensus 74 vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d-----~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (591)
+||..+.+...+..+..... -.+++..++++.++.|+ .+ ..+.+||..+.+....-.......
T Consensus 269 ~yd~~t~~W~~~~~~~~~R~-~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~---------- 337 (656)
T 1k3i_A 269 LYDSSSDSWIPGPDMQVARG-YQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPM---------- 337 (656)
T ss_dssp EEEGGGTEEEECCCCSSCCS-SCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGG----------
T ss_pred EecCcCCceeECCCCCcccc-ccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCcccccc----------
Confidence 99998774333322221111 13345567899999988 34 468899987755432210000000
Q ss_pred eeccCCCCcCcceeeeccCCCCceEEEECCCCCEEEEEeCC---------CcEEEeCCCCeEEEEecc-C---------C
Q psy710 148 IIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTKT---------GSLRLLGRPGVDAHVRHE-T---------D 208 (591)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---------g~i~i~d~~~~~~~~~~~-~---------~ 208 (591)
.. ..+ ...+..++..++.|+.+ ..+..||........... . .
T Consensus 338 ------------~~--~~~-----~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~ 398 (656)
T 1k3i_A 338 ------------LT--ADK-----QGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDA 398 (656)
T ss_dssp ------------CC--CCT-----TGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCC
T ss_pred ------------cc--ccc-----cceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCC
Confidence 00 000 00112233334444433 346677776554321111 0 1
Q ss_pred CcEEEEEEEc-CCceEEEEeCCC-----------cEEEEEccCCCcceEEeeeecccc-EEEEEecCCCCEEEEEeCC--
Q psy710 209 AAVIQMQFLT-NEGALITATADD-----------SLHLWNFRQKRPEIVHSLKFQRER-ITYIHLPLQSKWLYVGTEK-- 273 (591)
Q Consensus 209 ~~v~~~~~~~-~~~~l~~~~~d~-----------~i~~wd~~~~~~~~~~~~~~~~~~-v~~~~~sp~~~~l~~~~~d-- 273 (591)
..-.++.|.. +++.++.|+.++ .+.+||..+.....+..-...... -.+++..|+++++++|+.+
T Consensus 399 ~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~ 478 (656)
T 1k3i_A 399 MCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRG 478 (656)
T ss_dssp BTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBC
T ss_pred CCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccC
Confidence 1234444543 677777777532 577788776632222100111122 2344566899999998854
Q ss_pred ---------ccEEEEEccCccccceeeehhhhccccccCCCCCeEEEecCCCCCCeEEEEEc
Q psy710 274 ---------GNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKLLLAYE 326 (591)
Q Consensus 274 ---------g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~ 326 (591)
..+.+||..+.+... ...+...........+.| +++.++.|+.
T Consensus 479 ~~~~~~~~~~~v~~ydp~t~~W~~---------~~~~~~~R~~hs~a~ll~-dg~v~v~GG~ 530 (656)
T 1k3i_A 479 IPFEDSTPVFTPEIYVPEQDTFYK---------QNPNSIVRVYHSISLLLP-DGRVFNGGGG 530 (656)
T ss_dssp CTTCCCSBCCCCEEEEGGGTEEEE---------CCCCSSCCCTTEEEEECT-TSCEEEEECC
T ss_pred cCcCCCCcccceEEEcCCCCceee---------cCCCCCccccccHhhcCC-CcEEEecCCC
Confidence 468999987765421 001111111223344568 8898888875
No 265
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.64 E-value=5e-05 Score=72.23 Aligned_cols=240 Identities=10% Similarity=0.039 Sum_probs=145.8
Q ss_pred CCCCcEEEeCCCCcEEEEEeCCCcEEEEcCCCceeEeeccCCcceEEEEEeecCCEEEEe-cCCCeEEEEeecccCceee
Q psy710 7 PYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGVDAHVRHETDAAVIQMQFLTNEGALITA-TADDSLHLWNFRQKRPEIV 85 (591)
Q Consensus 7 ~~~v~~~~~spdg~~la~g~~dg~i~lw~~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~-~~d~~i~vw~~~~~~~~~~ 85 (591)
++..+|.+..+++ +|..+. ...|+..++++.....+.........++|.+.++.|+.+ ...+.|..++++....+
T Consensus 33 ~d~~~C~~~~~~~-~ll~~~-~~~I~~i~~~g~~~~~~~~~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~-- 108 (349)
T 3v64_C 33 PDRRSCKALGPEP-VLLFAN-RIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVE-- 108 (349)
T ss_dssp TTSSCEEESSSCC-EEEEEC-BSCEEEECTTSCCEEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE--
T ss_pred CCCCcccccccCc-eeEeec-ccceEEEeCCCCeeEEeecCCCceEEEEEeccccEEEEEeccCCceEEEecCCCCce--
Confidence 3456777777754 444443 345888888876655554445568899999877666654 45788888888766421
Q ss_pred eEEEeeccceEEEEeeCCceEE-EEEeCCCcEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCcceeeec
Q psy710 86 HSLKFQRERITYIHLPLQSKWL-YVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRH 164 (591)
Q Consensus 86 ~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (591)
..+.........+++.+.+..| ++-...+.|.+.++........+ .
T Consensus 109 ~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~---------------------------------~ 155 (349)
T 3v64_C 109 EVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLL---------------------------------W 155 (349)
T ss_dssp EEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE---------------------------------C
T ss_pred EEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEE---------------------------------e
Confidence 1122222345778888755544 44445678888877642211111 1
Q ss_pred cCCCCceEEEECCCCCEEEEEe-CC-CcEEEeCCCCeEEEEec-cCCCcEEEEEEEcCCceEEEEe-CCCcEEEEEccCC
Q psy710 165 GFPYQPTAIAFDPIQKLLAIGT-KT-GSLRLLGRPGVDAHVRH-ETDAAVIQMQFLTNEGALITAT-ADDSLHLWNFRQK 240 (591)
Q Consensus 165 ~~~~~v~~~~~~~~~~~l~~~~-~d-g~i~i~d~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~-~d~~i~~wd~~~~ 240 (591)
.....+..++++|.+..|+... .. +.|..++..+....... ........++++|+++.|+.+. ..+.|..+|+...
T Consensus 156 ~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~ 235 (349)
T 3v64_C 156 QSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGS 235 (349)
T ss_dssp TTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred CCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCC
Confidence 1123468999999665555444 34 77888887765443332 2234678999998777776664 4577999998765
Q ss_pred CcceEEeeeeccccEEEEEecCCCCEEEEEeCCccEEEEEccCccc
Q psy710 241 RPEIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTL 286 (591)
Q Consensus 241 ~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~ 286 (591)
. ....+.........+++ .++...++-...+.|..++..+++.
T Consensus 236 ~--~~~~~~~~~~~P~giav-~~~~ly~td~~~~~V~~~~~~~G~~ 278 (349)
T 3v64_C 236 H--RKAVISQGLPHPFAITV-FEDSLYWTDWHTKSINSANKFTGKN 278 (349)
T ss_dssp S--CEEEECSSCSSEEEEEE-ETTEEEEEETTTTEEEEEETTTCCS
T ss_pred c--eEEEEeCCCCCceEEEE-ECCEEEEecCCCCeEEEEEccCCCc
Confidence 2 22222222345667777 3444455555667788887555543
No 266
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.60 E-value=2.9e-06 Score=74.96 Aligned_cols=182 Identities=10% Similarity=0.056 Sum_probs=120.9
Q ss_pred CCceEEEECCCCCEEEEEeCCCcEEEeCCCCeEEEEeccCCCcEEEEEEEcCCceEEE-EeCCCcEEEEEccCCCcceEE
Q psy710 168 YQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGVDAHVRHETDAAVIQMQFLTNEGALIT-ATADDSLHLWNFRQKRPEIVH 246 (591)
Q Consensus 168 ~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~d~~i~~wd~~~~~~~~~~ 246 (591)
.-...+.|+ ++.+..+.+.+|.|+.+|+++++..... -..........++++.|+. .-.++.+.+||..+. +.+.
T Consensus 55 ~ftqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl--~~~~ 130 (268)
T 3nok_A 55 AFTQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLTWTEGLLFTWSGMPP--QRER 130 (268)
T ss_dssp CCEEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEESSSCEEEEEETTTT--EEEE
T ss_pred cccceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEccCCEEEEEECCcC--cEEE
Confidence 334788887 4667777888899999999887765443 2223322222334444444 456789999999988 7777
Q ss_pred eeeeccccEEEEEecCCCCEEEEEeCCccEEEEEccCccccceeeehhhhccccccCCC---CCeEEEecCCCCCCeEEE
Q psy710 247 SLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHP---GPIIHLSDNPLDPSKLLL 323 (591)
Q Consensus 247 ~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~---~~v~~~~~sp~~~~~l~~ 323 (591)
++..... -..++ +|++.|+.+..+++|.++|..+.+..... ....+. ..++.+.|. ++...+.
T Consensus 131 ti~~~~e-GwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I---------~V~~~g~~v~~lNeLe~~--dG~lyan 196 (268)
T 3nok_A 131 TTRYSGE-GWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAV---------QVKLRGQPVELINELECA--NGVIYAN 196 (268)
T ss_dssp EEECSSC-CCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEE---------ECEETTEECCCEEEEEEE--TTEEEEE
T ss_pred EEeCCCc-eeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEE---------EeCCCCcccccccccEEe--CCEEEEE
Confidence 7765422 23333 57888888888889999999988765321 111121 234667765 4554444
Q ss_pred EEcCCEEEEEecccceEEEEeccC--------------CCeeEEEEeecCCEEEEEec
Q psy710 324 AYETGLVVHWDLKLKRAEFRWQCS--------------EPIKSVCWHYEGKQFLCSHT 367 (591)
Q Consensus 324 ~~~dg~i~iwd~~~~~~~~~~~~~--------------~~v~~~~~sp~g~~l~s~~~ 367 (591)
...+..|.+.|..+++++..+.-. .-.+.+|++|+++.|...+.
T Consensus 197 vw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK 254 (268)
T 3nok_A 197 IWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGK 254 (268)
T ss_dssp ETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEET
T ss_pred ECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCC
Confidence 556889999999999998877621 35688999998766666553
No 267
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.59 E-value=0.0004 Score=71.30 Aligned_cols=342 Identities=11% Similarity=-0.022 Sum_probs=183.4
Q ss_pred CCCcEEEeCCCCcEEE-EEeCCCcEEEEcCCCceeEeec-cCCcceEEEEEeecCCEEEEecC--CCeEEEEeecccCce
Q psy710 8 YQPTAIAFDPIQKLLA-IGTKTGSLRLLGRPGVDAHVRH-ETDAAVIQMQFLTNEGALITATA--DDSLHLWNFRQKRPE 83 (591)
Q Consensus 8 ~~v~~~~~spdg~~la-~g~~dg~i~lw~~~~~~~~~~~-~h~~~v~~l~~sp~~~~l~s~~~--d~~i~vw~~~~~~~~ 83 (591)
..+..+|+++.++.|. +-...+.|.+.++++.....+. ..-.....|++.|.+.+|+.+.. .+.|...+++.....
T Consensus 84 ~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~ 163 (619)
T 3s94_A 84 LSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRF 163 (619)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCE
T ss_pred CCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceE
Confidence 3567899999655555 4456789999999876655443 44456788999998766665543 356666666543211
Q ss_pred eeeEEEeeccceEEEEeeCCceEEEEEeC-CCcEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCcceee
Q psy710 84 IVHSLKFQRERITYIHLPLQSKWLYVGTE-KGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTF 162 (591)
Q Consensus 84 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (591)
. .....-.....+++.++++.|+.+.. .+.|...++...........
T Consensus 164 ~--l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~------------------------------ 211 (619)
T 3s94_A 164 I--IINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKG------------------------------ 211 (619)
T ss_dssp E--EECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC-----------------------------------
T ss_pred E--EEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeC------------------------------
Confidence 1 11122345788999987766666654 56788888765332221110
Q ss_pred eccCCCCceEEEECCCCCEEEEEeCCCcEEEeCCCCeEEE--------------EeccC------------CCcEEEEEE
Q psy710 163 RHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGVDAH--------------VRHET------------DAAVIQMQF 216 (591)
Q Consensus 163 ~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~--------------~~~~~------------~~~v~~~~~ 216 (591)
....+..+++..+ .++.+-..++.|...|..+++.. ..+.. ......+++
T Consensus 212 ---~~~~P~gi~~~~~-~ly~td~~~~~V~~~d~~tg~~~~~i~~~~~~p~~i~v~~~~~qp~~~n~C~~~ng~Cs~lCl 287 (619)
T 3s94_A 212 ---SLPHPFALTLFED-ILYWTDWSTHSILACNKYTGEGLREIHSDIFSPMDIHAFSQQRQPNATNPCGIDNGGCSHLCL 287 (619)
T ss_dssp -------CCCEEESSS-EEEEECTTTCSEEEEESSSCCCCEECCSCCCCCSEEEECCGGGSCCCCCTTTTTGGGCSSEEE
T ss_pred ---CCCCceEEEEeCC-EEEEecCCCCEEEEEECCCCcccEEEecCCCCCcEEEEEccccCCCccccccCCCCcccceEE
Confidence 0111234555444 33333333445555544322110 00000 001111111
Q ss_pred -----------Ec-------CC--------ceEEEEeCCCcEEEEEccCCCcceEE-eeeeccccEEEEEecCCCCEEEE
Q psy710 217 -----------LT-------NE--------GALITATADDSLHLWNFRQKRPEIVH-SLKFQRERITYIHLPLQSKWLYV 269 (591)
Q Consensus 217 -----------~~-------~~--------~~l~~~~~d~~i~~wd~~~~~~~~~~-~~~~~~~~v~~~~~sp~~~~l~~ 269 (591)
.| ++ .+|+.+. .+.|+..++.......+. .+. .-..+.+++|++.+..|+.
T Consensus 288 ~~~~~~~~~C~C~~g~~l~~d~~~C~~~~~~~Ll~~~-~~~i~~i~l~~~~~~~~~~~~~-~l~~~~~ld~d~~~~~ly~ 365 (619)
T 3s94_A 288 MSPVKPFYQCACPTGVKLLENGKTCKDGATELLLLAR-RTDLRRISLDTPDFTDIVLQLE-DIRHAIAIDYDPVEGYIYW 365 (619)
T ss_dssp ECSSTTSEEEECCTTCCBCTTSSCBCSSCSEEEEEEE-SSCEEEEESSSTTCCCEECCCS-CCSSEEEEEEETTTTEEEE
T ss_pred CCCCCCCceEeCCchheecccCcccCCCCceEEEEEc-ccceEEEecCCCccceeEEecc-ccCccEEEEEEcCCCeEEE
Confidence 11 11 1333333 356777777655322221 111 1245778999986666665
Q ss_pred Ee-CCccEEEEEccCccccceeeehhhhccccccCCCCCeEEEecCCCCCC-eEEEEEcCCEEEEEecccceEEEEec-c
Q psy710 270 GT-EKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPS-KLLLAYETGLVVHWDLKLKRAEFRWQ-C 346 (591)
Q Consensus 270 ~~-~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~-~ 346 (591)
+. ..+.|+.+++...... ............+++.+ .++ +.++-+..+.|.+.++.......... .
T Consensus 366 sD~~~~~I~r~~~~g~~~~-----------~v~~~~~~~p~GlAvD~-~~~~lY~tD~~~~~I~v~~~~G~~~~~l~~~~ 433 (619)
T 3s94_A 366 TDDEVRAIRRSFIDGSGSQ-----------FVVTAQIAHPDGIAVDW-VARNLYWTDTGTDRIEVTRLNGTMRKILISED 433 (619)
T ss_dssp EETTTTEEEEEETTSCSCE-----------EEECSSCSCCCEEEEET-TTTEEEEEETTTTEEEEEETTSCSCEEEECTT
T ss_pred EeCCCCeEEEEEcCCCccE-----------EEEECCCCCcCceEEec-ccCcEEEEeCCCCcEEEEeCCCCeEEEEEECC
Confidence 54 5678888888764331 01222234566788876 445 44444557899999988765444443 3
Q ss_pred CCCeeEEEEeecCCEEEEEec--CCcEEEEecCCCCCceeeecccccccCCCCCCCCCcceEEEEee
Q psy710 347 SEPIKSVCWHYEGKQFLCSHT--DGTISTWAVRPLAKPVSVNQPHIKTNKDGKLEQCKPIQKVEWKH 411 (591)
Q Consensus 347 ~~~v~~~~~sp~g~~l~s~~~--dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 411 (591)
-....++++.|...+|..+.. .+.|...+++ |.....+.... ...-..|+..+
T Consensus 434 l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~d--G~~~~~l~~~~----------l~~P~GlalD~ 488 (619)
T 3s94_A 434 LEEPRAIVLDPMVGYMYWTDWGEIPKIERAALD--GSDRVVLVNTS----------LGWPNGLALDY 488 (619)
T ss_dssp CCSEEEEEEETTTTEEEEEECSSSCEEEEEETT--SCSCEEEECSS----------CSCEEEEEEET
T ss_pred CCCeeeEEEEcCCCcEEEecCCCCCEEEEEccC--CCccEEEEeCC----------CCCCeeeEEcc
Confidence 467899999997555555443 3566666666 43333332210 34456777764
No 268
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.59 E-value=1.8e-05 Score=70.51 Aligned_cols=206 Identities=12% Similarity=0.123 Sum_probs=133.8
Q ss_pred cCCCCceEEEECCCCC-EEEEEeCCCcEEEeCCCCeEEEEec--cCCCcEEEEEEEcCCceEEEEeCCCcEEEEEccCCC
Q psy710 165 GFPYQPTAIAFDPIQK-LLAIGTKTGSLRLLGRPGVDAHVRH--ETDAAVIQMQFLTNEGALITATADDSLHLWNFRQKR 241 (591)
Q Consensus 165 ~~~~~v~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~ 241 (591)
+....+..++++|+++ ++++...++.|...|.. ++..... ......-.+++.+++.++++.-.++.+.++++....
T Consensus 24 g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~ 102 (255)
T 3qqz_A 24 GITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTPNS 102 (255)
T ss_dssp TCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEECTTC
T ss_pred CcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcCCCC
Confidence 4556789999999765 55568888999999998 4444333 223578889999888877776677889999887653
Q ss_pred c-ceEEeee------eccccEEEEEecCCCCEEEEEeCCccEEEEEccCcccc--ceeeehhhhccccccCCCCCeEEEe
Q psy710 242 P-EIVHSLK------FQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLS--GYIINWNKAIDVCMKTHPGPIIHLS 312 (591)
Q Consensus 242 ~-~~~~~~~------~~~~~v~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~--~~~~~~~~~~~~~~~~~~~~v~~~~ 312 (591)
. ..+.... ........++++|+++.|+++.+.....+|.+.. ... ...+...+.. .-..+...+.+++
T Consensus 103 ~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g-~~~~~~l~i~~~~~~--~~~~~~~d~S~l~ 179 (255)
T 3qqz_A 103 EVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNG-LLSSNELHISKDKAL--QRQFTLDDVSGAE 179 (255)
T ss_dssp CEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEES-TTCSSCCEEEECHHH--HHTCCSSCCCEEE
T ss_pred eeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcc-cccCCceeeecchhh--ccccccCCceeEE
Confidence 1 1122221 1233468999999998888888776666666652 110 0111101000 0111234578999
Q ss_pred cCCCCCCeEEEEEcCCEEEEEecccceEEEEeccC----------CCeeEEEEeecCCEEEEEecCCcEEEEec
Q psy710 313 DNPLDPSKLLLAYETGLVVHWDLKLKRAEFRWQCS----------EPIKSVCWHYEGKQFLCSHTDGTISTWAV 376 (591)
Q Consensus 313 ~sp~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~----------~~v~~~~~sp~g~~l~s~~~dg~i~vwd~ 376 (591)
++|..+++++.+.....+.++|.... ++..+.-. .....++|.++|+..++ ++-+.++++.-
T Consensus 180 ~dp~tg~lliLS~~s~~L~~~d~~g~-~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIv-sE~n~~y~f~~ 251 (255)
T 3qqz_A 180 FNQQKNTLLVLSHESRALQEVTLVGE-VIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIV-SEPNRFYRFTP 251 (255)
T ss_dssp EETTTTEEEEEETTTTEEEEECTTCC-EEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEE-ETTTEEEEEEC
T ss_pred EcCCCCeEEEEECCCCeEEEEcCCCC-EEEEEEcCCccCCcccccCCCCeeEECCCCCEEEE-cCCceEEEEEe
Confidence 99966667777777889999997755 55554411 25679999999985544 67776655543
No 269
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.58 E-value=9.7e-06 Score=71.06 Aligned_cols=185 Identities=10% Similarity=0.074 Sum_probs=122.5
Q ss_pred CCCCceEEEECCCCCEEEEEeCC--CcEEEeCCCCeEEEEeccCCCcEEEEEEEcCCceE-EEEeCCCcEEEEEccCCCc
Q psy710 166 FPYQPTAIAFDPIQKLLAIGTKT--GSLRLLGRPGVDAHVRHETDAAVIQMQFLTNEGAL-ITATADDSLHLWNFRQKRP 242 (591)
Q Consensus 166 ~~~~v~~~~~~~~~~~l~~~~~d--g~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~~wd~~~~~~ 242 (591)
...-...+.|++ +.++.+.+.. ..|+.+|+.+++......-............++.| ...-.++.+.+||..+.
T Consensus 19 ~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~tl-- 95 (243)
T 3mbr_X 19 TTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRNHEGFVYDLATL-- 95 (243)
T ss_dssp TTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETTTT--
T ss_pred CccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeCCEEEEEECCcC--
Confidence 334457899986 5555565554 48999999999887665443333333233334444 44456789999999988
Q ss_pred ceEEeeeeccccEEEEEecCCCCEEEEEeCCccEEEEEccCccccceeeehhhhccccccCCC---CCeEEEecCCCCCC
Q psy710 243 EIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHP---GPIIHLSDNPLDPS 319 (591)
Q Consensus 243 ~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~---~~v~~~~~sp~~~~ 319 (591)
+.+.++...... ..++ ++++.|+++..++.|.++|..+.+..... ....+. ..++.+.+. ++.
T Consensus 96 ~~~~ti~~~~~G-wglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I---------~V~~~g~~~~~lNeLe~~--~G~ 161 (243)
T 3mbr_X 96 TPRARFRYPGEG-WALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSI---------KVTAGGRPLDNLNELEWV--NGE 161 (243)
T ss_dssp EEEEEEECSSCC-CEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEE---------ECEETTEECCCEEEEEEE--TTE
T ss_pred cEEEEEeCCCCc-eEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEE---------EEccCCcccccceeeEEe--CCE
Confidence 777777654322 3333 57788888888889999999988764311 111111 234566654 455
Q ss_pred eEEEEEcCCEEEEEecccceEEEEecc--------------CCCeeEEEEeecCCEEEEEec
Q psy710 320 KLLLAYETGLVVHWDLKLKRAEFRWQC--------------SEPIKSVCWHYEGKQFLCSHT 367 (591)
Q Consensus 320 ~l~~~~~dg~i~iwd~~~~~~~~~~~~--------------~~~v~~~~~sp~g~~l~s~~~ 367 (591)
..+....+..|.+.|..+++++..+.- ..-.+.+|++|+++.|...+.
T Consensus 162 lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 162 LLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp EEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred EEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence 444454678999999999999888761 124578999998877777664
No 270
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.57 E-value=0.00068 Score=69.59 Aligned_cols=320 Identities=11% Similarity=0.053 Sum_probs=173.5
Q ss_pred CCcEEEeCCCCcEEEEEe-CCCcEEEEcCCCce--eEeeccCCcceEEEEEeecCCEEE-EecCCCeEEEEeecccCcee
Q psy710 9 QPTAIAFDPIQKLLAIGT-KTGSLRLLGRPGVD--AHVRHETDAAVIQMQFLTNEGALI-TATADDSLHLWNFRQKRPEI 84 (591)
Q Consensus 9 ~v~~~~~spdg~~la~g~-~dg~i~lw~~~~~~--~~~~~~h~~~v~~l~~sp~~~~l~-s~~~d~~i~vw~~~~~~~~~ 84 (591)
.+..++|++.+..|..+. ..+.|..+++++.. ...+...-.....+++.+.++.|+ +-...+.|.+.+++...
T Consensus 41 ~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~--- 117 (619)
T 3s94_A 41 DAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSL--- 117 (619)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS---
T ss_pred ceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCC---
Confidence 456889998666665554 46778888887542 233333335788999999666555 44557899999987653
Q ss_pred eeEEE-eeccceEEEEeeCCceEEEEEeC--CCcEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCccee
Q psy710 85 VHSLK-FQRERITYIHLPLQSKWLYVGTE--KGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKT 161 (591)
Q Consensus 85 ~~~~~-~~~~~v~~~~~~~~~~~l~~~~~--d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (591)
...+. ..-.....+++.|.+..|+.... .+.|...++.........
T Consensus 118 ~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~------------------------------- 166 (619)
T 3s94_A 118 RKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIII------------------------------- 166 (619)
T ss_dssp CEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEE-------------------------------
T ss_pred EEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEE-------------------------------
Confidence 22222 23345678999887655555543 345555544321111000
Q ss_pred eeccCCCCceEEEECCCCCEEEEE-eCCCcEEEeCCCCeEEEEecc-CCCcEEEEEEEcCCceEEEE-eCCCcEEEEEcc
Q psy710 162 FRHGFPYQPTAIAFDPIQKLLAIG-TKTGSLRLLGRPGVDAHVRHE-TDAAVIQMQFLTNEGALITA-TADDSLHLWNFR 238 (591)
Q Consensus 162 ~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~-~~d~~i~~wd~~ 238 (591)
...-..++.++++++++.|..+ ...+.|..+++.+........ .......+++..+ .|+.+ ...+.|...|..
T Consensus 167 --~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~gi~~~~~--~ly~td~~~~~V~~~d~~ 242 (619)
T 3s94_A 167 --NSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFED--ILYWTDWSTHSILACNKY 242 (619)
T ss_dssp --CSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC---------CCCEEESSS--EEEEECTTTCSEEEEESS
T ss_pred --eCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeCCCCCceEEEEeCC--EEEEecCCCCEEEEEECC
Confidence 0112346899999976555544 456789999987654432221 1112345565444 44444 456778888876
Q ss_pred CCCcc-----------eEEeeeecc-------------------------ccEEEEE-----ecCCC--------CEEEE
Q psy710 239 QKRPE-----------IVHSLKFQR-------------------------ERITYIH-----LPLQS--------KWLYV 269 (591)
Q Consensus 239 ~~~~~-----------~~~~~~~~~-------------------------~~v~~~~-----~sp~~--------~~l~~ 269 (591)
+++.. -+..+.... ....|.+ +.+|+ .+|+.
T Consensus 243 tg~~~~~i~~~~~~p~~i~v~~~~~qp~~~n~C~~~ng~Cs~lCl~~~~~~~~~C~C~~g~~l~~d~~~C~~~~~~~Ll~ 322 (619)
T 3s94_A 243 TGEGLREIHSDIFSPMDIHAFSQQRQPNATNPCGIDNGGCSHLCLMSPVKPFYQCACPTGVKLLENGKTCKDGATELLLL 322 (619)
T ss_dssp SCCCCEECCSCCCCCSEEEECCGGGSCCCCCTTTTTGGGCSSEEEECSSTTSEEEECCTTCCBCTTSSCBCSSCSEEEEE
T ss_pred CCcccEEEecCCCCCcEEEEEccccCCCccccccCCCCcccceEECCCCCCCceEeCCchheecccCcccCCCCceEEEE
Confidence 55211 111110000 0011111 01111 12333
Q ss_pred EeCCccEEEEEccCccccceeeehhhhccccccCCCCCeEEEecCCCCCCeEEEEE-cCCEEEEEecccceEEEEec-cC
Q psy710 270 GTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKLLLAY-ETGLVVHWDLKLKRAEFRWQ-CS 347 (591)
Q Consensus 270 ~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~-~~ 347 (591)
+. .+.|+..++....... .. .....-..+..++|.+ .++.|+.+. ..+.|+.+++.......... .-
T Consensus 323 ~~-~~~i~~i~l~~~~~~~--------~~-~~~~~l~~~~~ld~d~-~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~~~ 391 (619)
T 3s94_A 323 AR-RTDLRRISLDTPDFTD--------IV-LQLEDIRHAIAIDYDP-VEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQI 391 (619)
T ss_dssp EE-SSCEEEEESSSTTCCC--------EE-CCCSCCSSEEEEEEET-TTTEEEEEETTTTEEEEEETTSCSCEEEECSSC
T ss_pred Ec-ccceEEEecCCCccce--------eE-EeccccCccEEEEEEc-CCCeEEEEeCCCCeEEEEEcCCCccEEEEECCC
Confidence 32 3456655655433211 00 1111234578899998 666666554 47889999988755444443 33
Q ss_pred CCeeEEEEeecCCEEE-EEecCCcEEEEecC
Q psy710 348 EPIKSVCWHYEGKQFL-CSHTDGTISTWAVR 377 (591)
Q Consensus 348 ~~v~~~~~sp~g~~l~-s~~~dg~i~vwd~~ 377 (591)
.....+++.+.++.|. +-+..+.|.+.+++
T Consensus 392 ~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~ 422 (619)
T 3s94_A 392 AHPDGIAVDWVARNLYWTDTGTDRIEVTRLN 422 (619)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCcCceEEecccCcEEEEeCCCCcEEEEeCC
Confidence 5678999987555444 44566789999988
No 271
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.57 E-value=0.00015 Score=70.28 Aligned_cols=231 Identities=9% Similarity=0.014 Sum_probs=140.9
Q ss_pred EEEEEeCCCcEEEEcCCCceeEeeccCCcceEEEEEeecCCEEEEe-cCCCeEEEEeecccC--ceeeeEEEeeccceEE
Q psy710 21 LLAIGTKTGSLRLLGRPGVDAHVRHETDAAVIQMQFLTNEGALITA-TADDSLHLWNFRQKR--PEIVHSLKFQRERITY 97 (591)
Q Consensus 21 ~la~g~~dg~i~lw~~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~-~~d~~i~vw~~~~~~--~~~~~~~~~~~~~v~~ 97 (591)
+|+.+. ...|+..++++.....+......+..++|.+.++.|+.+ ...+.|..++++... ......+.........
T Consensus 85 ~ll~~~-~~~I~~i~l~~~~~~~~~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~g 163 (400)
T 3p5b_L 85 YLFFTN-RHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDG 163 (400)
T ss_dssp EEEEEE-TTEEEEECTTSCSCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEE
T ss_pred eeEEec-cceeEEEccCCcceeEeccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCccc
Confidence 455444 467999998876666555566788999999877666655 456888888887521 0112222223345778
Q ss_pred EEeeCCc-eEEEEEeCCCcEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEEC
Q psy710 98 IHLPLQS-KWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFD 176 (591)
Q Consensus 98 ~~~~~~~-~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 176 (591)
+++.+.+ ++.++-...+.|.+.+++.......+. .....+..++++
T Consensus 164 lavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~---------------------------------~~~~~P~~iavd 210 (400)
T 3p5b_L 164 LAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFR---------------------------------ENGSKPRAIVVD 210 (400)
T ss_dssp EEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEE---------------------------------CSSCCEEEEEEE
T ss_pred EEEEecCCceEEEECCCCeEEEEeCCCCceEEEEe---------------------------------CCCCCcceEEEe
Confidence 8888744 444444456778887776432211111 112346899999
Q ss_pred CCCCEEEEEeC--CCcEEEeCCCCeEEEEe-ccCCCcEEEEEEEcCCceEEEEe-CCCcEEEEEccCCCcceEEeeeecc
Q psy710 177 PIQKLLAIGTK--TGSLRLLGRPGVDAHVR-HETDAAVIQMQFLTNEGALITAT-ADDSLHLWNFRQKRPEIVHSLKFQR 252 (591)
Q Consensus 177 ~~~~~l~~~~~--dg~i~i~d~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~~wd~~~~~~~~~~~~~~~~ 252 (591)
|.+..|+.... .+.|...++.+...... ...-.....++++++++.|+.+. ..+.|..+|+.......+.......
T Consensus 211 p~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l 290 (400)
T 3p5b_L 211 PVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRL 290 (400)
T ss_dssp TTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTT
T ss_pred cccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCC
Confidence 97666665553 47888888876543332 22235788999999888777774 4578999998765322332221122
Q ss_pred ccEEEEEecCCCCEEEEEeCCccEEEEEccCccc
Q psy710 253 ERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTL 286 (591)
Q Consensus 253 ~~v~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~ 286 (591)
.....+++. .+.++++-...+.|..+|..+++.
T Consensus 291 ~~P~gl~v~-~~~lywtd~~~~~V~~~~~~~G~~ 323 (400)
T 3p5b_L 291 AHPFSLAVF-EDKVFWTDIINEAIFSANRLTGSD 323 (400)
T ss_dssp SSEEEEEEE-TTEEEEEESSSCSEEEEESSSCCC
T ss_pred CCCEEEEEe-CCEEEEecCCCCeEEEEEcCCCCc
Confidence 345566763 344555556667888888666654
No 272
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.55 E-value=5.9e-05 Score=72.91 Aligned_cols=238 Identities=10% Similarity=0.024 Sum_probs=142.8
Q ss_pred CCcEEEeCCCCcEEEEEeCCCcEEEEcCCCceeEeeccCCcceEEEEEeecCCEEEEe-cCCCeEEEEeecccCceeeeE
Q psy710 9 QPTAIAFDPIQKLLAIGTKTGSLRLLGRPGVDAHVRHETDAAVIQMQFLTNEGALITA-TADDSLHLWNFRQKRPEIVHS 87 (591)
Q Consensus 9 ~v~~~~~spdg~~la~g~~dg~i~lw~~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~-~~d~~i~vw~~~~~~~~~~~~ 87 (591)
.-+|.+..+++ +|+.+. ...|+..++.+.....+.........++|.+.++.|+.+ ...+.|..++++.... ...
T Consensus 78 ~~~C~~~~~~~-~l~~~~-~~~I~~i~~~~~~~~~~~~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~--~~~ 153 (386)
T 3v65_B 78 RRSCKALGPEP-VLLFAN-RIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNV--EEV 153 (386)
T ss_dssp SSCEEECSSCC-EEEEEC-BSCEEEECTTSCCCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCE--EEE
T ss_pred CCeECCccccc-eeEeec-CccceeeccCCCcEEEEecCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCc--EEE
Confidence 44566666644 444443 356888888866655554455668899999876666544 4568888888876531 122
Q ss_pred EEeeccceEEEEeeCCceEEEEE-eCCCcEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCcceeeeccC
Q psy710 88 LKFQRERITYIHLPLQSKWLYVG-TEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGF 166 (591)
Q Consensus 88 ~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (591)
+.........+++.+.+..|+.. ...+.|.+.++........+ ...
T Consensus 154 ~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~---------------------------------~~~ 200 (386)
T 3v65_B 154 VSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLL---------------------------------WQS 200 (386)
T ss_dssp ECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEE---------------------------------CSS
T ss_pred EeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEee---------------------------------cCC
Confidence 22222345678888755544444 44567777666532111110 112
Q ss_pred CCCceEEEECCCCCEEEEEeC-C-CcEEEeCCCCeEEEEe-ccCCCcEEEEEEEcCCceEEEE-eCCCcEEEEEccCCCc
Q psy710 167 PYQPTAIAFDPIQKLLAIGTK-T-GSLRLLGRPGVDAHVR-HETDAAVIQMQFLTNEGALITA-TADDSLHLWNFRQKRP 242 (591)
Q Consensus 167 ~~~v~~~~~~~~~~~l~~~~~-d-g~i~i~d~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~~wd~~~~~~ 242 (591)
...+..++++|.+..|+.... . +.|..++..+...... .........++++|+++.|+.+ ...+.|..+|+....
T Consensus 201 l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~- 279 (386)
T 3v65_B 201 LEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSH- 279 (386)
T ss_dssp CSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCS-
T ss_pred CCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCe-
Confidence 244689999997666655543 4 6788888776443322 2223467899999877777666 445779889887542
Q ss_pred ceEEeeeeccccEEEEEecCCCCEEEEEeCCccEEEEEccCccc
Q psy710 243 EIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTL 286 (591)
Q Consensus 243 ~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~ 286 (591)
....+.........+++ ..+.++++-...+.|..++..+++.
T Consensus 280 -~~~~~~~~~~~P~giav-~~~~ly~td~~~~~V~~~~~~~G~~ 321 (386)
T 3v65_B 280 -RKAVISQGLPHPFAITV-FEDSLYWTDWHTKSINSANKFTGKN 321 (386)
T ss_dssp -CEEEECSSCSSEEEEEE-ETTEEEEEETTTTEEEEEETTTCCS
T ss_pred -eEEEEECCCCCceEEEE-ECCEEEEeeCCCCeEEEEECCCCcc
Confidence 22223222345677777 3445555555677888888655544
No 273
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.54 E-value=0.00034 Score=65.52 Aligned_cols=203 Identities=7% Similarity=-0.078 Sum_probs=125.4
Q ss_pred CCceEEEECCCCCEEE-EEeCCCcEEEeCCCC----eEEEE-eccCCCcEEEEEEEcCCceEE-EEeCCCcEEEEEccCC
Q psy710 168 YQPTAIAFDPIQKLLA-IGTKTGSLRLLGRPG----VDAHV-RHETDAAVIQMQFLTNEGALI-TATADDSLHLWNFRQK 240 (591)
Q Consensus 168 ~~v~~~~~~~~~~~l~-~~~~dg~i~i~d~~~----~~~~~-~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~~wd~~~~ 240 (591)
..+..++|++.++.|+ +-..++.|..++..+ ..... ..........+++.+.++.|+ +-...+.|.++++...
T Consensus 30 ~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~ 109 (316)
T 1ijq_A 30 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV 109 (316)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSS
T ss_pred CceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCC
Confidence 3468999998665454 445568899998875 22121 212223567899987555554 4466788999998765
Q ss_pred CcceEEeeeeccccEEEEEecCCCCEEEEEeCC--ccEEEEEccCccccceeeehhhhccccccCCCCCeEEEecCCCCC
Q psy710 241 RPEIVHSLKFQRERITYIHLPLQSKWLYVGTEK--GNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDP 318 (591)
Q Consensus 241 ~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d--g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~ 318 (591)
.....+.........++++|.+..|+.+... +.|..+++...... ......-.....++++| ++
T Consensus 110 --~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~-----------~~~~~~~~~P~gla~d~-~~ 175 (316)
T 1ijq_A 110 --KRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY-----------SLVTENIQWPNGITLDL-LS 175 (316)
T ss_dssp --SEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEE-----------EEECSSCSCEEEEEEET-TT
T ss_pred --ceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeE-----------EEEECCCCCceEEEEec-cC
Confidence 2222233233567899999977766655543 67888887643221 01112235678999999 77
Q ss_pred CeEEEEE-cCCEEEEEecccceEEEEec---cCCCeeEEEEeecCCEEEEEecCCcEEEEecCCCCCceeee
Q psy710 319 SKLLLAY-ETGLVVHWDLKLKRAEFRWQ---CSEPIKSVCWHYEGKQFLCSHTDGTISTWAVRPLAKPVSVN 386 (591)
Q Consensus 319 ~~l~~~~-~dg~i~iwd~~~~~~~~~~~---~~~~v~~~~~sp~g~~l~s~~~dg~i~vwd~~~~~~~~~~~ 386 (591)
+.|+.+. ..+.|..+|+.......... .......+++. .+.++++-...+.|..++.. +++.+..+
T Consensus 176 ~~lY~~D~~~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~-~~~ly~~d~~~~~V~~~~~~-~g~~~~~i 245 (316)
T 1ijq_A 176 GRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRL-TGSDVNLL 245 (316)
T ss_dssp TEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE-TTEEEEEETTTTEEEEEETT-TCCCCEEE
T ss_pred CEEEEEECCCCeEEEEecCCCceEEEeecCCccCCcEEEEEE-CCEEEEEECCCCeEEEEeCC-CCcceEEE
Confidence 7776665 46799999998654433332 22456778884 45555555567788888876 45554444
No 274
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.53 E-value=4.6e-05 Score=66.79 Aligned_cols=194 Identities=11% Similarity=0.088 Sum_probs=125.0
Q ss_pred cCCCcEEEEEEEcCCceEEEEeCC--CcEEEEEccCCCcceEEeeeecccc-EEEEEecCCCCEEE-EEeCCccEEEEEc
Q psy710 206 ETDAAVIQMQFLTNEGALITATAD--DSLHLWNFRQKRPEIVHSLKFQRER-ITYIHLPLQSKWLY-VGTEKGNIHVVNI 281 (591)
Q Consensus 206 ~~~~~v~~~~~~~~~~~l~~~~~d--~~i~~wd~~~~~~~~~~~~~~~~~~-v~~~~~sp~~~~l~-~~~~dg~i~i~d~ 281 (591)
........+.|++ +.++.+.+.+ ..|+.+|+.++ +.+..+...... -..+++ +++.|+ ..-.++.+.+||.
T Consensus 18 d~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tg--kv~~~~~l~~~~fgeGi~~--~~~~ly~ltw~~~~v~v~D~ 92 (243)
T 3mbr_X 18 DTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETG--RILQRAEVPPPYFGAGIVA--WRDRLIQLTWRNHEGFVYDL 92 (243)
T ss_dssp CTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTC--CEEEEEECCTTCCEEEEEE--ETTEEEEEESSSSEEEEEET
T ss_pred CCccccccEEEEC-CEEEEECCCCCCceEEEEECCCC--CEEEEEeCCCCcceeEEEE--eCCEEEEEEeeCCEEEEEEC
Confidence 3356788899986 5555555554 48999999998 566666543221 123344 344444 4456789999999
Q ss_pred cCccccceeeehhhhccccccCCCCCeEEEecCCCCCCeEEEEEcCCEEEEEecccceEEEEeccC------CCeeEEEE
Q psy710 282 ESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKLLLAYETGLVVHWDLKLKRAEFRWQCS------EPIKSVCW 355 (591)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~------~~v~~~~~ 355 (591)
.+.+.... ....+ .+ ..++ + ++..|+.+..++.|.++|..+.+....+.-. ..++.+.|
T Consensus 93 ~tl~~~~t---------i~~~~-~G--wglt--~-dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~ 157 (243)
T 3mbr_X 93 ATLTPRAR---------FRYPG-EG--WALT--S-DDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEW 157 (243)
T ss_dssp TTTEEEEE---------EECSS-CC--CEEE--E-CSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEE
T ss_pred CcCcEEEE---------EeCCC-Cc--eEEe--e-CCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEE
Confidence 99887531 11112 11 3343 5 6777777777899999999998888776621 35667777
Q ss_pred eecCCEEEEEecCCcEEEEecCCCCCceeeecccccccCCCC--CCCCCcceEEEEeecCCCCcEEEEECC
Q psy710 356 HYEGKQFLCSHTDGTISTWAVRPLAKPVSVNQPHIKTNKDGK--LEQCKPIQKVEWKHSRSGEGFVIFSGG 424 (591)
Q Consensus 356 sp~g~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~~~~~~~~~~~~~l~~g~ 424 (591)
. +|+..+..-.+..|.+-|.. +++.+..+.-......... .....-...|+|.|. ...++++|-
T Consensus 158 ~-~G~lyanvw~s~~I~vIDp~-tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~---~~~lfVTGK 223 (243)
T 3mbr_X 158 V-NGELLANVWLTSRIARIDPA-SGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAE---HDRLFVTGK 223 (243)
T ss_dssp E-TTEEEEEETTTTEEEEECTT-TCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETT---TTEEEEEET
T ss_pred e-CCEEEEEECCCCeEEEEECC-CCCEEEEEECCcCccccccccCCcCCceEEEEEcCC---CCEEEEECC
Confidence 6 77766666577889999999 8888877654432211111 112456789999862 245666664
No 275
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.53 E-value=0.00023 Score=67.69 Aligned_cols=203 Identities=10% Similarity=-0.010 Sum_probs=127.6
Q ss_pred CceEEEECCCCCEEE-EEeCCCcEEEeCCCCeEEEEe-ccCCCcEEEEEEEcCCceEE-EEeCCCcEEEEEccCCCcceE
Q psy710 169 QPTAIAFDPIQKLLA-IGTKTGSLRLLGRPGVDAHVR-HETDAAVIQMQFLTNEGALI-TATADDSLHLWNFRQKRPEIV 245 (591)
Q Consensus 169 ~v~~~~~~~~~~~l~-~~~~dg~i~i~d~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~~wd~~~~~~~~~ 245 (591)
.+..++|++..+.|. +-...+.|+.++..+...... .........+++.+.+..|+ +-...+.|.+.++.... ..
T Consensus 74 ~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~--~~ 151 (349)
T 3v64_C 74 NAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAH--RK 151 (349)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCS--CE
T ss_pred ceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCc--eE
Confidence 468999997655555 445678899898876543322 22223567899998655554 44556789999987652 22
Q ss_pred EeeeeccccEEEEEecCCCCEEEEEe-CC-ccEEEEEccCccccceeeehhhhccccccCCCCCeEEEecCCCCCCeEEE
Q psy710 246 HSLKFQRERITYIHLPLQSKWLYVGT-EK-GNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKLLL 323 (591)
Q Consensus 246 ~~~~~~~~~v~~~~~sp~~~~l~~~~-~d-g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~ 323 (591)
..+.........++++|.+..|+... .+ +.|..+++...... ............++++| ++..|+.
T Consensus 152 ~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~-----------~~~~~~~~~PnGla~d~-~~~~lY~ 219 (349)
T 3v64_C 152 VLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRR-----------IIADTHLFWPNGLTIDY-AGRRMYW 219 (349)
T ss_dssp EEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCE-----------ESCCSSCSCEEEEEEET-TTTEEEE
T ss_pred EEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcE-----------EEEECCCCCcceEEEeC-CCCEEEE
Confidence 22323335678999999766666554 34 67888887654321 11222344678999998 7777666
Q ss_pred EE-cCCEEEEEecccceEEEEec-cCCCeeEEEEeecCCEEEEEecCCcEEEEecCCCCCceeeec
Q psy710 324 AY-ETGLVVHWDLKLKRAEFRWQ-CSEPIKSVCWHYEGKQFLCSHTDGTISTWAVRPLAKPVSVNQ 387 (591)
Q Consensus 324 ~~-~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp~g~~l~s~~~dg~i~vwd~~~~~~~~~~~~ 387 (591)
+. ..+.|..+|+.......... .......+++ ..+..+++-...+.|...+.. +++....+.
T Consensus 220 aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~giav-~~~~ly~td~~~~~V~~~~~~-~G~~~~~i~ 283 (349)
T 3v64_C 220 VDAKHHVIERANLDGSHRKAVISQGLPHPFAITV-FEDSLYWTDWHTKSINSANKF-TGKNQEIIR 283 (349)
T ss_dssp EETTTTEEEEEETTSCSCEEEECSSCSSEEEEEE-ETTEEEEEETTTTEEEEEETT-TCCSCEEEE
T ss_pred EECCCCEEEEEeCCCCceEEEEeCCCCCceEEEE-ECCEEEEecCCCCeEEEEEcc-CCCccEEec
Confidence 55 46789999988655444333 3445677888 345555555566778888754 455555443
No 276
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.51 E-value=0.00023 Score=66.61 Aligned_cols=230 Identities=10% Similarity=0.021 Sum_probs=136.8
Q ss_pred EEEEEeCCCcEEEEcCCCceeEeeccCCcceEEEEEeecCCEEEEe-cCCCeEEEEeeccc---CceeeeEEEeeccceE
Q psy710 21 LLAIGTKTGSLRLLGRPGVDAHVRHETDAAVIQMQFLTNEGALITA-TADDSLHLWNFRQK---RPEIVHSLKFQRERIT 96 (591)
Q Consensus 21 ~la~g~~dg~i~lw~~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~-~~d~~i~vw~~~~~---~~~~~~~~~~~~~~v~ 96 (591)
+|+.+.. ..|+..++.+.....+-........++|.++++.|+.+ ..++.|..++++.. . .....+........
T Consensus 3 ~ll~~~~-~~I~~i~~~~~~~~~~~~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~-~~~~~~~~~~~~p~ 80 (316)
T 1ijq_A 3 YLFFTNR-HEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVS-SYDTVISRDIQAPD 80 (316)
T ss_dssp EEEEECB-SSEEEEETTSCCCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC---------CEEEECSSCSCCC
T ss_pred EEEEECC-CeEEEEECCCcceEehhcCCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCc-ccEEEEeCCCCCcC
Confidence 4444443 46889998865544444445667899999877666544 45689999998761 1 11111222223467
Q ss_pred EEEeeCCceEEE-EEeCCCcEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEE
Q psy710 97 YIHLPLQSKWLY-VGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAF 175 (591)
Q Consensus 97 ~~~~~~~~~~l~-~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 175 (591)
.+++.+.+..|+ +-...+.|.+.++........+. .....+..+++
T Consensus 81 glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~---------------------------------~~~~~P~~iav 127 (316)
T 1ijq_A 81 GLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFR---------------------------------ENGSKPRAIVV 127 (316)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEE---------------------------------CTTCCEEEEEE
T ss_pred EEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEE---------------------------------CCCCCcceEEe
Confidence 888886554444 44557788888875422111111 11234689999
Q ss_pred CCCCCEEEEEeCC--CcEEEeCCCCeEEEEe-ccCCCcEEEEEEEcCCceEEEEe-CCCcEEEEEccCCCcceEEeeeec
Q psy710 176 DPIQKLLAIGTKT--GSLRLLGRPGVDAHVR-HETDAAVIQMQFLTNEGALITAT-ADDSLHLWNFRQKRPEIVHSLKFQ 251 (591)
Q Consensus 176 ~~~~~~l~~~~~d--g~i~i~d~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~~wd~~~~~~~~~~~~~~~ 251 (591)
+|.+..|+..... +.|..++..+...... ...-.....++++++++.|+.+. ..+.|..+|+.....+.+......
T Consensus 128 dp~~g~ly~~d~~~~~~I~~~~~dG~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~~~~~~~ 207 (316)
T 1ijq_A 128 DPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKR 207 (316)
T ss_dssp ETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTT
T ss_pred CCCCCEEEEEccCCCCeEEEEcCCCCCeEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCceEEEeecCCc
Confidence 9976666555542 6888888765543322 22234688999999887777664 456899999976432222221112
Q ss_pred cccEEEEEecCCCCEEEEEeCCccEEEEEccCccc
Q psy710 252 RERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTL 286 (591)
Q Consensus 252 ~~~v~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~ 286 (591)
......+++. .+.++++-...+.|..++..+++.
T Consensus 208 ~~~P~giav~-~~~ly~~d~~~~~V~~~~~~~g~~ 241 (316)
T 1ijq_A 208 LAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGSD 241 (316)
T ss_dssp TSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCCC
T ss_pred cCCcEEEEEE-CCEEEEEECCCCeEEEEeCCCCcc
Confidence 2345677774 345555555667888888766543
No 277
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.50 E-value=4.4e-05 Score=74.88 Aligned_cols=154 Identities=8% Similarity=0.066 Sum_probs=97.4
Q ss_pred ceEEEEEee-cCCEEEEecCCCeEEEEeecccCceeeeEEEeeccceEEEEeeCCceEEEEEeCC-C----cEEEEEeee
Q psy710 50 AVIQMQFLT-NEGALITATADDSLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEK-G----NIHVVNIES 123 (591)
Q Consensus 50 ~v~~l~~sp-~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-~----~i~vwd~~~ 123 (591)
....++++| ++..|+.+...+.|+.+|++.+. +..+.........++|+++++.|+++... + .+..++ ..
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~---v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~-~~ 213 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEY---VSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILT-RE 213 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTE---EEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEE-GG
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCE---EEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEe-CC
Confidence 457889998 45566666555788888887653 33343345568899999999976666542 2 222222 22
Q ss_pred eeeeceecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECC-CCCEEEEEeCCCcEEEeCCCCeEEE
Q psy710 124 FTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDP-IQKLLAIGTKTGSLRLLGRPGVDAH 202 (591)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~ 202 (591)
+.... ...+. ....+..++++| ++.++++-..++.|..++..+....
T Consensus 214 g~~~~------------------------------~~~l~--~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~ 261 (430)
T 3tc9_A 214 SGFKV------------------------------ITELT--KGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETT 261 (430)
T ss_dssp GTSCS------------------------------EEEEE--ECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEE
T ss_pred Cceee------------------------------eeeec--cCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEE
Confidence 21110 00000 123357889999 6776666667889999998876542
Q ss_pred E--eccCCCcEEEEEEEcCCceEEEE-eCCCcEEEEEccC
Q psy710 203 V--RHETDAAVIQMQFLTNEGALITA-TADDSLHLWNFRQ 239 (591)
Q Consensus 203 ~--~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~~wd~~~ 239 (591)
. ..........++|+|++++|+.+ ...+.|..++...
T Consensus 262 ~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d~ 301 (430)
T 3tc9_A 262 PLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYDW 301 (430)
T ss_dssp EEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEET
T ss_pred EEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCCc
Confidence 2 22222457889999999966555 5667899988764
No 278
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.47 E-value=0.00013 Score=65.03 Aligned_cols=209 Identities=9% Similarity=0.091 Sum_probs=130.8
Q ss_pred CCCCCCcEEEeCCCCc-EEEEEeCCCcEEEEcCCCceeEeec-cCCcceEEEEEeecCCEEEEecCCCeEEEEeecccCc
Q psy710 5 GFPYQPTAIAFDPIQK-LLAIGTKTGSLRLLGRPGVDAHVRH-ETDAAVIQMQFLTNEGALITATADDSLHLWNFRQKRP 82 (591)
Q Consensus 5 gh~~~v~~~~~spdg~-~la~g~~dg~i~lw~~~~~~~~~~~-~h~~~v~~l~~sp~~~~l~s~~~d~~i~vw~~~~~~~ 82 (591)
|-.+.+..++++|++. ++|+...++.|...|.++...+.+. ........+++.+++.++++.-.++.+.++++.....
T Consensus 24 g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~~ 103 (255)
T 3qqz_A 24 GITNNISSLTWSAQSNTLFSTINKPAAIVEMTTNGDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTPNSE 103 (255)
T ss_dssp TCCSCEEEEEEETTTTEEEEEEETTEEEEEEETTCCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEECTTCC
T ss_pred CcccCcceeEEeCCCCEEEEEECCCCeEEEEeCCCCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcCCCCe
Confidence 4456789999999765 5556778888999998876666553 2235678889999888777766678899998876531
Q ss_pred -eeeeEEE------eeccceEEEEeeCCceEEEEEeCCCcEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCCC
Q psy710 83 -EIVHSLK------FQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNP 155 (591)
Q Consensus 83 -~~~~~~~------~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (591)
..+.... ........++|+|+++.|+++.+.....+|.+.. . ... .........
T Consensus 104 i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g-~-~~~----------------~~l~i~~~~- 164 (255)
T 3qqz_A 104 VKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNG-L-LSS----------------NELHISKDK- 164 (255)
T ss_dssp EEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEES-T-TCS----------------SCCEEEECH-
T ss_pred eeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcc-c-ccC----------------Cceeeecch-
Confidence 1122222 1223468999999998888887766667776652 0 000 000000000
Q ss_pred cCcceeeeccCCCCceEEEECCC-CCEEEEEeCCCcEEEeCCCCeEEEEe--ccC-------CCcEEEEEEEcCCceEEE
Q psy710 156 LDPSKTFRHGFPYQPTAIAFDPI-QKLLAIGTKTGSLRLLGRPGVDAHVR--HET-------DAAVIQMQFLTNEGALIT 225 (591)
Q Consensus 156 ~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~--~~~-------~~~v~~~~~~~~~~~l~~ 225 (591)
.... ......+..++++|. +++++....+..+..+|..+...... ... -.....++|.++|+ |+.
T Consensus 165 -~~~~---~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~-lyI 239 (255)
T 3qqz_A 165 -ALQR---QFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGN-IYI 239 (255)
T ss_dssp -HHHH---TCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTTCCEEEEEECSTTGGGCSSCCCSEEEEEECTTCC-EEE
T ss_pred -hhcc---ccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCCCCEEEEEEcCCccCCcccccCCCCeeEECCCCC-EEE
Confidence 0000 011234689999995 45666677778888899887633221 111 13678999999997 555
Q ss_pred EeCCCcEEEEEc
Q psy710 226 ATADDSLHLWNF 237 (591)
Q Consensus 226 ~~~d~~i~~wd~ 237 (591)
.++.+.++.|.-
T Consensus 240 vsE~n~~y~f~~ 251 (255)
T 3qqz_A 240 VSEPNRFYRFTP 251 (255)
T ss_dssp EETTTEEEEEEC
T ss_pred EcCCceEEEEEe
Confidence 567676666543
No 279
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.47 E-value=0.002 Score=66.15 Aligned_cols=359 Identities=11% Similarity=0.027 Sum_probs=200.3
Q ss_pred CCCcEEEeCCCCcEEEEEe--CCCcEEEEcCCCceeEeeccCCcceEEEEEeecCCEEEEec-CCCeEEEEeecccCcee
Q psy710 8 YQPTAIAFDPIQKLLAIGT--KTGSLRLLGRPGVDAHVRHETDAAVIQMQFLTNEGALITAT-ADDSLHLWNFRQKRPEI 84 (591)
Q Consensus 8 ~~v~~~~~spdg~~la~g~--~dg~i~lw~~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~~-~d~~i~vw~~~~~~~~~ 84 (591)
.....++++|...+|.... ..+.|...++++.....+...-.....|++.++++.|+.+. ..+.|...+++....
T Consensus 123 ~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~-- 200 (628)
T 4a0p_A 123 DSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR-- 200 (628)
T ss_dssp CCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC--
T ss_pred CCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce--
Confidence 3467899998655555554 25678888888766665544556788999999877776654 467888888876542
Q ss_pred eeEEEeeccceEEEEeeCCceEEEEEeCCCcEEEEEeeeeeeeceeccccc--------------ccccC----------
Q psy710 85 VHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNK--------------AIDVC---------- 140 (591)
Q Consensus 85 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~--------------~~~~~---------- 140 (591)
..+.........+++.. +..+++-...+.|...|..+++....+..... ...+.
T Consensus 201 -~v~~~~l~~P~glav~~-~~ly~tD~~~~~I~~~dk~tg~~~~~l~~~~~~p~~i~v~~~~~q~~~n~C~~~ng~C~~~ 278 (628)
T 4a0p_A 201 -EVIADDLPHPFGLTQYQ-DYIYWTDWSRRSIERANKTSGQNRTIIQGHLDYVMDILVFHSSRQSGWNECASSNGHCSHL 278 (628)
T ss_dssp -EEEEECCSCEEEEEEET-TEEEEEETTTTEEEEEETTTCCSCEEEECSCCSCCEEEEECGGGSCCCCTTTTTGGGCSSE
T ss_pred -EEeeccCCCceEEEEEC-CEEEEecCCCCEEEEEECCCCCceEEEecCCCCcceeeeeeecccccceEeccCCCCcchh
Confidence 22333334456777764 44444444567888887655543222211000 00000
Q ss_pred -----------CCCCCCcee----------------------ccCCCCcC-cceeeeccCCCCceEEEECCCCCEEEEEe
Q psy710 141 -----------MKTHPGPII----------------------HLSDNPLD-PSKTFRHGFPYQPTAIAFDPIQKLLAIGT 186 (591)
Q Consensus 141 -----------~~~~~~~~~----------------------~~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 186 (591)
.++.+-... .+...... ....+.......+..++|++..+.|+.+.
T Consensus 279 C~~~~~~~~~C~C~~g~~l~~d~~~C~~~~~~Ll~s~~~~i~~i~l~~~~~~~~~l~~~~~~~~~~ld~d~~~~~iy~sD 358 (628)
T 4a0p_A 279 CLAVPVGGFVCGCPAHYSLNADNRTCSAPTTFLLFSQKSAINRMVIDEQQSPDIILPIHSLRNVRAIDYDPLDKQLYWID 358 (628)
T ss_dssp EEEETTTEEEEECSTTCEECTTSSCEECCSSEEEEEETTEEEEECCCTTCCCCEECCCTTCSCEEEEEEETTTTEEEEEE
T ss_pred hhcCCCCCeeEEcCCCcEecccCCcCccccceeeeeccceEEEEecccccCceEEEEehhcCCceEEEEecCCCeEEEEe
Confidence 011110000 00000000 00001111123467888888655555444
Q ss_pred -CCCcEEEeCCCCeEEE-Eecc------CCCcEEEEEEEcCCceEE-EEeCCCcEEEEEccCCCcceEEee-eeccccEE
Q psy710 187 -KTGSLRLLGRPGVDAH-VRHE------TDAAVIQMQFLTNEGALI-TATADDSLHLWNFRQKRPEIVHSL-KFQRERIT 256 (591)
Q Consensus 187 -~dg~i~i~d~~~~~~~-~~~~------~~~~v~~~~~~~~~~~l~-~~~~d~~i~~wd~~~~~~~~~~~~-~~~~~~v~ 256 (591)
..+.|+.++..+.... .... ....+..+++...++.|+ +-+..+.|.+.++... ....+ ........
T Consensus 359 ~~~~~I~r~~~~g~~~~~v~~~~~~~~~~~~~p~glAvD~~~~nLY~td~~~~~I~v~~~~G~---~~~~l~~~~l~~Pr 435 (628)
T 4a0p_A 359 SRQNMIRKAQEDGSQGFTVVVSSVPSQNLEIQPYDLSIDIYSRYIYWTCEATNVINVTRLDGR---SVGVVLKGEQDRPR 435 (628)
T ss_dssp TTTTEEEEEETTSCSCEEEEC--------CCCEEEEEEETTTTEEEEEETTTTEEEEEETTSC---EEEEEEECTTCCEE
T ss_pred cCcceEEEEEcCCCCceEEEEcccccccccCCcceEEeeccCCeEEEEcCCCCEEEEEECCCC---eEEEEEeCCCCcee
Confidence 4677887776643221 1111 223688999998876555 5456788999988654 22232 33346789
Q ss_pred EEEecCCCCEEEEEeC-Cc--cEEEEEccCccccceeeehhhhccccccCCCCCeEEEecCCCCCCeEEEEEc-CCEEEE
Q psy710 257 YIHLPLQSKWLYVGTE-KG--NIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKLLLAYE-TGLVVH 332 (591)
Q Consensus 257 ~~~~sp~~~~l~~~~~-dg--~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~-dg~i~i 332 (591)
.+++.|...+|+.... .. .|...++...... ......-...+.+++.+ +.+.|+.+.. .+.|..
T Consensus 436 ~iavdp~~g~ly~tD~g~~~~~I~r~~~dG~~~~-----------~l~~~~l~~P~gla~D~-~~~~LYw~D~~~~~I~~ 503 (628)
T 4a0p_A 436 AVVVNPEKGYMYFTNLQERSPKIERAALDGTERE-----------VLFFSGLSKPIALALDS-RLGKLFWADSDLRRIES 503 (628)
T ss_dssp EEEEETTTTEEEEEEEETTEEEEEEEETTSCSCE-----------EEECSSCSCEEEEEEET-TTTEEEEEETTTTEEEE
T ss_pred eEEEecCCCeEEEeecCCCCCeEEEEeCCCCCcE-----------EEEeccCCCccEEEEeC-CCCEEEEEeCCCCEEEE
Confidence 9999995444444332 22 5666666543221 11222345678999999 7777777655 588999
Q ss_pred EecccceEEEEec-cCCCeeEEEEeecCCEEEEEecCCcEEEEecCCCCCceeeec
Q psy710 333 WDLKLKRAEFRWQ-CSEPIKSVCWHYEGKQFLCSHTDGTISTWAVRPLAKPVSVNQ 387 (591)
Q Consensus 333 wd~~~~~~~~~~~-~~~~v~~~~~sp~g~~l~s~~~dg~i~vwd~~~~~~~~~~~~ 387 (591)
.++.......... .......++... +..+.+=...+.|...|.. +++....+.
T Consensus 504 ~~~dG~~r~~~~~~~~~~P~glav~~-~~ly~tD~~~~~i~~~~k~-~G~~~~~i~ 557 (628)
T 4a0p_A 504 SDLSGANRIVLEDSNILQPVGLTVFE-NWLYWIDKQQQMIEKIDMT-GREGRTKVQ 557 (628)
T ss_dssp EETTSCSCEEEECSSCSCEEEEEEET-TEEEEEETTTTEEEEEETT-SSSCCEEEE
T ss_pred EeCCCCceEEEEcCCCCCcEEEEEEC-CEEEEEECCCCeEEEEECc-CCCCcEEEe
Confidence 9997655444332 334567777753 4344444455667777766 455544444
No 280
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.47 E-value=0.00013 Score=70.44 Aligned_cols=204 Identities=9% Similarity=-0.033 Sum_probs=128.6
Q ss_pred CCceEEEECCCCCEE-EEEeCCCcEEEeCCCCeEEEEec-cCCCcEEEEEEEcCCceEEEE-eCCCcEEEEEccCCCcce
Q psy710 168 YQPTAIAFDPIQKLL-AIGTKTGSLRLLGRPGVDAHVRH-ETDAAVIQMQFLTNEGALITA-TADDSLHLWNFRQKRPEI 244 (591)
Q Consensus 168 ~~v~~~~~~~~~~~l-~~~~~dg~i~i~d~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~-~~d~~i~~wd~~~~~~~~ 244 (591)
..+..++|++.++.| ++-...+.|+.++..+....... ........+++.+.+..|+.+ ...+.|.+.++.... .
T Consensus 116 ~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~--~ 193 (386)
T 3v65_B 116 ENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAH--R 193 (386)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCS--C
T ss_pred CccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCc--e
Confidence 346899999755544 45556788999988776543322 222356778999866555444 556788888887552 2
Q ss_pred EEeeeeccccEEEEEecCCCCEEEEEeC-C-ccEEEEEccCccccceeeehhhhccccccCCCCCeEEEecCCCCCCeEE
Q psy710 245 VHSLKFQRERITYIHLPLQSKWLYVGTE-K-GNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKLL 322 (591)
Q Consensus 245 ~~~~~~~~~~v~~~~~sp~~~~l~~~~~-d-g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~ 322 (591)
...+.........++++|.+..|+.... . +.|..+++...... ............++++| ++..|+
T Consensus 194 ~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~-----------~~~~~~~~~PnGlavd~-~~~~lY 261 (386)
T 3v65_B 194 KVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRR-----------IIADTHLFWPNGLTIDY-AGRRMY 261 (386)
T ss_dssp EEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCE-----------EEECSSCSCEEEEEEEG-GGTEEE
T ss_pred EEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcE-----------EEEECCCCCeeeEEEeC-CCCEEE
Confidence 2223333356789999997776665543 3 57888887654321 11122334578999998 677666
Q ss_pred EEE-cCCEEEEEecccceEEEEec-cCCCeeEEEEeecCCEEEEEecCCcEEEEecCCCCCceeeec
Q psy710 323 LAY-ETGLVVHWDLKLKRAEFRWQ-CSEPIKSVCWHYEGKQFLCSHTDGTISTWAVRPLAKPVSVNQ 387 (591)
Q Consensus 323 ~~~-~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp~g~~l~s~~~dg~i~vwd~~~~~~~~~~~~ 387 (591)
.+. ..+.|..+|+.......... .......+++ ..+.++++-...+.|..++.. +++....+.
T Consensus 262 ~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~giav-~~~~ly~td~~~~~V~~~~~~-~G~~~~~i~ 326 (386)
T 3v65_B 262 WVDAKHHVIERANLDGSHRKAVISQGLPHPFAITV-FEDSLYWTDWHTKSINSANKF-TGKNQEIIR 326 (386)
T ss_dssp EEETTTTEEEEECTTSCSCEEEECSSCSSEEEEEE-ETTEEEEEETTTTEEEEEETT-TCCSCEEEE
T ss_pred EEECCCCEEEEEeCCCCeeEEEEECCCCCceEEEE-ECCEEEEeeCCCCeEEEEECC-CCcceEEEc
Confidence 654 46789999987655444433 3445677888 355555565567778888855 455555544
No 281
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.47 E-value=0.00011 Score=72.06 Aligned_cols=238 Identities=10% Similarity=0.000 Sum_probs=136.0
Q ss_pred CCCcEEEeCCC--CcEEEEEeCCCcEEEEcCCCceeEeeccCCcceEEEEEeecCCEEEEecCC---Ce-EEEEeecccC
Q psy710 8 YQPTAIAFDPI--QKLLAIGTKTGSLRLLGRPGVDAHVRHETDAAVIQMQFLTNEGALITATAD---DS-LHLWNFRQKR 81 (591)
Q Consensus 8 ~~v~~~~~spd--g~~la~g~~dg~i~lw~~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~~~d---~~-i~vw~~~~~~ 81 (591)
.....++|+|+ +..|.++...+.|+.++.....+..+.........++|+++|+++++-... .. +...+...+.
T Consensus 139 ~~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~~ 218 (433)
T 4hw6_A 139 DNIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTTNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASGF 218 (433)
T ss_dssp SCCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEECCCCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGTT
T ss_pred CCCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEeecCCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCCe
Confidence 35679999995 344555544488999998766666665555678999999999944443311 12 3333332221
Q ss_pred ceeeeEEEeeccceEEEEeeC-CceEEEEEeCCCcEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCcce
Q psy710 82 PEIVHSLKFQRERITYIHLPL-QSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSK 160 (591)
Q Consensus 82 ~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (591)
.....+. .......++++| ++.+.++-..++.|+.++..++.....+..
T Consensus 219 -~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~---------------------------- 268 (433)
T 4hw6_A 219 -TERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVM---------------------------- 268 (433)
T ss_dssp -CCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEE----------------------------
T ss_pred -ecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEec----------------------------
Confidence 1111222 234456788899 555444444567888888876544211110
Q ss_pred eeeccCCCCceEEEECCCCCEEEEE-eCCCcEEEeCCC--CeE-----EEEec-cC------------CCcEEEEEE---
Q psy710 161 TFRHGFPYQPTAIAFDPIQKLLAIG-TKTGSLRLLGRP--GVD-----AHVRH-ET------------DAAVIQMQF--- 216 (591)
Q Consensus 161 ~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~i~d~~--~~~-----~~~~~-~~------------~~~v~~~~~--- 216 (591)
.+.......++|+|+++.|.++ ...+.|+.++.. +.. ..... .. -.....+++
T Consensus 269 ---~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n 345 (433)
T 4hw6_A 269 ---MDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKN 345 (433)
T ss_dssp ---CSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEEC
T ss_pred ---cCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEcc
Confidence 0111223579999999855544 456788886643 221 11111 10 124667888
Q ss_pred ------EcCCceEEEEeCCCcEEEEEccCCCcceEEeeeec------------------cccEEEEEec-CCCCEEEEEe
Q psy710 217 ------LTNEGALITATADDSLHLWNFRQKRPEIVHSLKFQ------------------RERITYIHLP-LQSKWLYVGT 271 (591)
Q Consensus 217 ------~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~------------------~~~v~~~~~s-p~~~~l~~~~ 271 (591)
.+++.++++-...+.|+.++. .+ .+..+.+. -.....++++ +++.++++-.
T Consensus 346 ~~y~~dd~~g~lyvaD~~n~~I~~~~~-~G---~v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~ 421 (433)
T 4hw6_A 346 EAYAGEEDEYDFYFCDRDSHTVRVLTP-EG---RVTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDC 421 (433)
T ss_dssp GGGTTSSCCEEEEEEETTTTEEEEECT-TS---EEEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEG
T ss_pred ccccccCCCCcEEEEECCCCEEEEECC-CC---CEEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeC
Confidence 566666666566778888874 22 23333221 1236788888 5565555555
Q ss_pred CCccEEEEEcc
Q psy710 272 EKGNIHVVNIE 282 (591)
Q Consensus 272 ~dg~i~i~d~~ 282 (591)
.+++|+.++++
T Consensus 422 ~n~rIr~i~~e 432 (433)
T 4hw6_A 422 DNHRVRKIAPE 432 (433)
T ss_dssp GGTEEEEEEEC
T ss_pred CCCEEEEEecC
Confidence 56677777654
No 282
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.44 E-value=0.0006 Score=66.10 Aligned_cols=205 Identities=7% Similarity=-0.071 Sum_probs=127.9
Q ss_pred CCceEEEECCCCCEEEEE-eCCCcEEEeCCCCeE-----EEEeccCCCcEEEEEEEcCCceEE-EEeCCCcEEEEEccCC
Q psy710 168 YQPTAIAFDPIQKLLAIG-TKTGSLRLLGRPGVD-----AHVRHETDAAVIQMQFLTNEGALI-TATADDSLHLWNFRQK 240 (591)
Q Consensus 168 ~~v~~~~~~~~~~~l~~~-~~dg~i~i~d~~~~~-----~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~~wd~~~~ 240 (591)
..+..++|++..+.|... ...+.|+.+++.+.. .............+++.+.++.|+ +-...+.|.+.++...
T Consensus 112 ~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~ 191 (400)
T 3p5b_L 112 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV 191 (400)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTTC
T ss_pred CcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCCCC
Confidence 456899999865555544 456788888876521 122222334678899998555454 4456678999988765
Q ss_pred CcceEEeeeeccccEEEEEecCCCCEEEEEeC--CccEEEEEccCccccceeeehhhhccccccCCCCCeEEEecCCCCC
Q psy710 241 RPEIVHSLKFQRERITYIHLPLQSKWLYVGTE--KGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDP 318 (591)
Q Consensus 241 ~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~--dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~ 318 (591)
.....+.........++++|.+..|+.... .+.|...++...... ......-.....|++++ ++
T Consensus 192 --~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~-----------~~~~~~l~~P~glavd~-~~ 257 (400)
T 3p5b_L 192 --KRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY-----------SLVTENIQWPNGITLDL-LS 257 (400)
T ss_dssp --SEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCE-----------EEECSSCSCEEEEEEET-TT
T ss_pred --ceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccE-----------EEEECCCCceEEEEEEe-CC
Confidence 233333333356789999997776766553 367888888754331 11122335678999999 77
Q ss_pred CeEEEEEc-CCEEEEEecccceEEEEecc---CCCeeEEEEeecCCEEEEEecCCcEEEEecCCCCCceeeecc
Q psy710 319 SKLLLAYE-TGLVVHWDLKLKRAEFRWQC---SEPIKSVCWHYEGKQFLCSHTDGTISTWAVRPLAKPVSVNQP 388 (591)
Q Consensus 319 ~~l~~~~~-dg~i~iwd~~~~~~~~~~~~---~~~v~~~~~sp~g~~l~s~~~dg~i~vwd~~~~~~~~~~~~~ 388 (591)
..|+.+.. .+.|..+|+........... -.....+++. .+.++.+-...+.|..+|.. +++.+..+..
T Consensus 258 ~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~-~~~lywtd~~~~~V~~~~~~-~G~~~~~i~~ 329 (400)
T 3p5b_L 258 GRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRL-TGSDVNLLAE 329 (400)
T ss_dssp TEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEE-TTEEEEEESSSCSEEEEESS-SCCCCEEEEC
T ss_pred CEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEe-CCEEEEecCCCCeEEEEEcC-CCCceEEEec
Confidence 77777654 67899999987555444332 2345577763 34455555566778888866 4655555543
No 283
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.44 E-value=0.001 Score=62.52 Aligned_cols=276 Identities=10% Similarity=0.044 Sum_probs=144.4
Q ss_pred CcceEEEEEeecCCEEEEecCCCeEEEEeecccCceeeeEEE--eeccceEEEEeeCCceEEEEEeCCCcEEEEEeeeee
Q psy710 48 DAAVIQMQFLTNEGALITATADDSLHLWNFRQKRPEIVHSLK--FQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFT 125 (591)
Q Consensus 48 ~~~v~~l~~sp~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~ 125 (591)
...+.++.|.+++..+++ +.++.| +...+.++.-...... .....+.++.|.+ +..++ ++..+.|+. ..+.++
T Consensus 35 ~~~~~~v~~~~~~~~~~~-G~~g~i-~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~-~~~~~-~g~~g~i~~-S~DgG~ 109 (327)
T 2xbg_A 35 TATILDMSFIDRHHGWLV-GVNATL-METRDGGQTWEPRTLVLDHSDYRFNSVSFQG-NEGWI-VGEPPIMLH-TTDGGQ 109 (327)
T ss_dssp SSCEEEEEESSSSCEEEE-ETTTEE-EEESSTTSSCEECCCCCSCCCCEEEEEEEET-TEEEE-EEETTEEEE-ESSTTS
T ss_pred CCcEEEEEECCCCcEEEE-cCCCeE-EEeCCCCCCCeECCCCCCCCCccEEEEEecC-CeEEE-EECCCeEEE-ECCCCC
Confidence 457899999877777774 456765 3333333211111111 1234678888876 44444 445554332 111111
Q ss_pred eeceecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCCCCEEEEEeCCCcEEE-eCCC-CeEEEE
Q psy710 126 LSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTKTGSLRL-LGRP-GVDAHV 203 (591)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i-~d~~-~~~~~~ 203 (591)
.=.... .. ..++..+..+.+.++++.++++ .+|.|+. .|-- +-+..
T Consensus 110 tW~~~~---------------------~~---------~~~~~~~~~i~~~~~~~~~~~~-~~g~v~~S~DgG~tW~~~- 157 (327)
T 2xbg_A 110 SWSQIP---------------------LD---------PKLPGSPRLIKALGNGSAEMIT-NVGAIYRTKDSGKNWQAL- 157 (327)
T ss_dssp SCEECC---------------------CC---------TTCSSCEEEEEEEETTEEEEEE-TTCCEEEESSTTSSEEEE-
T ss_pred CceECc---------------------cc---------cCCCCCeEEEEEECCCCEEEEe-CCccEEEEcCCCCCCEEe-
Confidence 000000 00 0112335677777777666655 4565543 3321 22222
Q ss_pred eccCCCcEEEEEEEcCCceEEEEeCCCcEEE-EEccCCCcceEEeeeeccccEEEEEecCCCCEEEEEeCCccEEEEEcc
Q psy710 204 RHETDAAVIQMQFLTNEGALITATADDSLHL-WNFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIE 282 (591)
Q Consensus 204 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~-wd~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~i~d~~ 282 (591)
.......+..+.+.+++.+++.+.. +.+.. .|-.....+.+. ......+..+.++++++.++ .+.+|.+++.+..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~g~~-G~~~~S~d~gG~tW~~~~--~~~~~~~~~~~~~~~g~~~~-~~~~G~~~~s~~D 233 (327)
T 2xbg_A 158 VQEAIGVMRNLNRSPSGEYVAVSSR-GSFYSTWEPGQTAWEPHN--RTTSRRLHNMGFTPDGRLWM-IVNGGKIAFSDPD 233 (327)
T ss_dssp ECSCCCCEEEEEECTTSCEEEEETT-SSEEEEECTTCSSCEEEE--CCSSSCEEEEEECTTSCEEE-EETTTEEEEEETT
T ss_pred ecCCCcceEEEEEcCCCcEEEEECC-CcEEEEeCCCCCceeECC--CCCCCccceeEECCCCCEEE-EeCCceEEEecCC
Confidence 2223447889999998877766644 54433 332111112221 23346788899999987655 5567877766422
Q ss_pred Cccccceeeehhhhccccc-cCCCCCeEEEecCCCCCCeEEEEEcCCEEEEEecccceEEEEec----cCCCeeEEEEee
Q psy710 283 SFTLSGYIINWNKAIDVCM-KTHPGPIIHLSDNPLDPSKLLLAYETGLVVHWDLKLKRAEFRWQ----CSEPIKSVCWHY 357 (591)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~----~~~~v~~~~~sp 357 (591)
.++. |... . .. ..+...+..+.+.+ ++..++++ .++.+ .+....++.-.... ....+.++.|.+
T Consensus 234 ~G~t------W~~~-~-~~~~~~~~~~~~v~~~~-~~~~~~~g-~~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~ 302 (327)
T 2xbg_A 234 NSEN------WGEL-L-SPLRRNSVGFLDLAYRT-PNEVWLAG-GAGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFS 302 (327)
T ss_dssp EEEE------ECCC-B-CTTSSCCSCEEEEEESS-SSCEEEEE-STTCE-EEESSTTSSCEECGGGTTSSSCCCEEEEEE
T ss_pred CCCe------eEec-c-CCcccCCcceEEEEecC-CCEEEEEe-CCCeE-EEeCCCCcccEEcCccCCCCCCeEEEEEEC
Confidence 1211 1100 0 01 11234588999988 76655554 56766 45555554333333 245688999986
Q ss_pred cCCEEEEEecCCcEEEEec
Q psy710 358 EGKQFLCSHTDGTISTWAV 376 (591)
Q Consensus 358 ~g~~l~s~~~dg~i~vwd~ 376 (591)
+++ +++++.+|.|.-++-
T Consensus 303 ~~~-~~~~G~~G~i~~~~~ 320 (327)
T 2xbg_A 303 PDQ-GFILGQKGILLRYVT 320 (327)
T ss_dssp TTE-EEEECSTTEEEEECC
T ss_pred CCc-eEEEcCCceEEEEcC
Confidence 554 666678897766654
No 284
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.41 E-value=2.1e-05 Score=83.33 Aligned_cols=155 Identities=10% Similarity=0.032 Sum_probs=92.5
Q ss_pred ceEEEEee-CCceEEEEEeC-CC----cEEEEEeeee-eeeceecccccccccCCCCCCCceeccCCCCcCcceeeeccC
Q psy710 94 RITYIHLP-LQSKWLYVGTE-KG----NIHVVNIESF-TLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGF 166 (591)
Q Consensus 94 ~v~~~~~~-~~~~~l~~~~~-d~----~i~vwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (591)
.+...+|| |||++|+.+.. +| .|+++|+.++ +.+.. .+
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~-------------------------------~~---- 219 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIAD-------------------------------KV---- 219 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCC-------------------------------CE----
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCc-------------------------------cc----
Confidence 57788999 99998886544 22 4999999876 42100 00
Q ss_pred CCCceEEEECCCCCEEEEEeCC-----CcEEEeCCCCeE----EEEeccCCCcEEEEEEEcCCceEEEEeC---CCcEEE
Q psy710 167 PYQPTAIAFDPIQKLLAIGTKT-----GSLRLLGRPGVD----AHVRHETDAAVIQMQFLTNEGALITATA---DDSLHL 234 (591)
Q Consensus 167 ~~~v~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~----~~~~~~~~~~v~~~~~~~~~~~l~~~~~---d~~i~~ 234 (591)
......++|+||++.|+....+ ..|+++++.+.. .+...........+.|+|||++|+..+. ...|.+
T Consensus 220 ~~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~ 299 (751)
T 2xe4_A 220 SGTNGEIVWGPDHTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHL 299 (751)
T ss_dssp EEECSCCEECSSTTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEE
T ss_pred cCceeeEEEecCCCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEE
Confidence 0112468899999888776654 257778776542 2222222335678899999998877653 346888
Q ss_pred EEccCCCcce--EEeeeeccccEEEEEecCCCCEEEEEeCC--c--cEEEEEccC
Q psy710 235 WNFRQKRPEI--VHSLKFQRERITYIHLPLQSKWLYVGTEK--G--NIHVVNIES 283 (591)
Q Consensus 235 wd~~~~~~~~--~~~~~~~~~~v~~~~~sp~~~~l~~~~~d--g--~i~i~d~~~ 283 (591)
+|+.++.... .............+.|+.++.+++....+ + .|..+++.+
T Consensus 300 ~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~ 354 (751)
T 2xe4_A 300 LDLRKGNAHNTLEIVRPREKGVRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQ 354 (751)
T ss_dssp EESSSCTTCCCEEESSCCCTTCCEEEEEETTTEEEEEECTTTCTTCEEEEEETTS
T ss_pred EECCCCCCCceeEEeecCCCCceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCC
Confidence 8887653222 22223333444555554444444444443 2 566666654
No 285
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.38 E-value=2.9e-05 Score=82.34 Aligned_cols=198 Identities=10% Similarity=0.085 Sum_probs=113.2
Q ss_pred CceEEEEC-CCCCEEEEEeC-CC----cEEEeCCCCe-EEEEeccCCCcEEEEEEEcCCceEEEEeCC-----CcEEEEE
Q psy710 169 QPTAIAFD-PIQKLLAIGTK-TG----SLRLLGRPGV-DAHVRHETDAAVIQMQFLTNEGALITATAD-----DSLHLWN 236 (591)
Q Consensus 169 ~v~~~~~~-~~~~~l~~~~~-dg----~i~i~d~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~~wd 236 (591)
.+...+|| |||++||.+.. +| .|+++|+.++ +..... .......+.|+||++.|+....+ ..|.+++
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~-~~~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~ 253 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADK-VSGTNGEIVWGPDHTSLFYVTKDETLRENKVWRHV 253 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCC-EEEECSCCEECSSTTEEEEEEECTTCCEEEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcc-ccCceeeEEEecCCCEEEEEEECCCCCCCEEEEEE
Confidence 46788999 99998886554 33 4999999887 522110 01123468899999888777654 2577778
Q ss_pred ccCCCcceEEeeee-ccccEEEEEecCCCCEEEEEeC---CccEEEEEccCccccceeeehhhhccccccCCCCCeEEEe
Q psy710 237 FRQKRPEIVHSLKF-QRERITYIHLPLQSKWLYVGTE---KGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLS 312 (591)
Q Consensus 237 ~~~~~~~~~~~~~~-~~~~v~~~~~sp~~~~l~~~~~---dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 312 (591)
+.+........+.. .......+.|+|||++|+..+. ...|+++|+.+...... .............++.
T Consensus 254 lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~-------~~~l~~~~~~~~~s~~ 326 (751)
T 2xe4_A 254 MGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNT-------LEIVRPREKGVRYDVQ 326 (751)
T ss_dssp TTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCC-------EEESSCCCTTCCEEEE
T ss_pred CCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCce-------eEEeecCCCCceEEEe
Confidence 77653222223322 2234667899999999886653 34688888876521100 0002223344555555
Q ss_pred cCCCCCCeEEEEEc-C----CEEEEEeccc-ceEEE-EeccCCCeeEEEEeecCCE-EEEEecCCcE--EEEec
Q psy710 313 DNPLDPSKLLLAYE-T----GLVVHWDLKL-KRAEF-RWQCSEPIKSVCWHYEGKQ-FLCSHTDGTI--STWAV 376 (591)
Q Consensus 313 ~sp~~~~~l~~~~~-d----g~i~iwd~~~-~~~~~-~~~~~~~v~~~~~sp~g~~-l~s~~~dg~i--~vwd~ 376 (591)
|+. ++.|+..+. + ..|..+|+.+ ++... .+.+...+.--.++++++. +++...++.. .++++
T Consensus 327 ~~~--g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~~~~lv~~~~~~g~~~l~~~dl 398 (751)
T 2xe4_A 327 MHG--TSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVRSNYLVVAGRRAGLTRIWTMMA 398 (751)
T ss_dssp EET--TTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEECSSEEEEEEEETTEEEEEEEEC
T ss_pred eee--CCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEECCEEEEEEEeCCEEEEEEEec
Confidence 544 555554433 3 3677778765 33333 4444443322233444544 4566677764 45554
No 286
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.38 E-value=5.5e-05 Score=74.13 Aligned_cols=245 Identities=9% Similarity=-0.028 Sum_probs=135.6
Q ss_pred ceEEEEeeCC--ceEEEEEeCCCcEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCce
Q psy710 94 RITYIHLPLQ--SKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPT 171 (591)
Q Consensus 94 ~v~~~~~~~~--~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 171 (591)
....++|+|+ ...|+.+...+.|+.++..+++...... ....+.
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~----------------------------------~~~~P~ 185 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTT----------------------------------NIGQCA 185 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEECC----------------------------------CCSCEE
T ss_pred CCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEeec----------------------------------CCCCcc
Confidence 3568889884 4445555444788888887655433221 123468
Q ss_pred EEEECCCCCEEEEEeCCC-----cEEEeCCCCeEE-EEeccCCCcEEEEEEEc-CCceEEEEeCCCcEEEEEccCCCcce
Q psy710 172 AIAFDPIQKLLAIGTKTG-----SLRLLGRPGVDA-HVRHETDAAVIQMQFLT-NEGALITATADDSLHLWNFRQKRPEI 244 (591)
Q Consensus 172 ~~~~~~~~~~l~~~~~dg-----~i~i~d~~~~~~-~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~ 244 (591)
.++++++++ |+++...+ .+..++...... ............++++| ++.++++-..++.|+.+|..++ ..
T Consensus 186 giavd~dG~-lyVad~~~~~~~~gv~~~~~~~~~~~~~~~~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g--~~ 262 (433)
T 4hw6_A 186 DVNFTLNGD-MVVVDDQSSDTNTGIYLFTRASGFTERLSLCNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATG--TL 262 (433)
T ss_dssp EEEECTTCC-EEEEECCSCTTSEEEEEECGGGTTCCEEEEEECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTC--CE
T ss_pred EEEECCCCC-EEEEcCCCCcccceEEEEECCCCeeccccccccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCC--eE
Confidence 999999999 54444321 133333221100 00001123456788899 5554445556678999988766 23
Q ss_pred EEee-ee-ccccEEEEEecCCCCEEEEEe-CCccEEEEEccC--ccccc-eee-e-hhhhc-c--ccccCCCCCeEEEec
Q psy710 245 VHSL-KF-QRERITYIHLPLQSKWLYVGT-EKGNIHVVNIES--FTLSG-YII-N-WNKAI-D--VCMKTHPGPIIHLSD 313 (591)
Q Consensus 245 ~~~~-~~-~~~~v~~~~~sp~~~~l~~~~-~dg~i~i~d~~~--~~~~~-~~~-~-~~~~~-~--~~~~~~~~~v~~~~~ 313 (591)
...+ .. .......++++|++++|+++. ..+.|+.++... +.... ..+ . +...- . ......-.....+++
T Consensus 263 ~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav 342 (433)
T 4hw6_A 263 TEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIF 342 (433)
T ss_dssp EEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEE
T ss_pred EEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEE
Confidence 1222 11 112234699999999666554 457899988652 22210 000 0 00000 0 000011234677888
Q ss_pred ---------CCCCCCeEEEEEcCCEEEEEecccceEEEEecc------------------CCCeeEEEEe-ecCCEEEEE
Q psy710 314 ---------NPLDPSKLLLAYETGLVVHWDLKLKRAEFRWQC------------------SEPIKSVCWH-YEGKQFLCS 365 (591)
Q Consensus 314 ---------sp~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~------------------~~~v~~~~~s-p~g~~l~s~ 365 (591)
.+ ++++.++-...+.|+.++. .+.+...... -.....++++ ++|.++++=
T Consensus 343 ~~n~~y~~dd~-~g~lyvaD~~n~~I~~~~~-~G~v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD 420 (433)
T 4hw6_A 343 VKNEAYAGEED-EYDFYFCDRDSHTVRVLTP-EGRVTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGD 420 (433)
T ss_dssp EECGGGTTSSC-CEEEEEEETTTTEEEEECT-TSEEEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEE
T ss_pred EccccccccCC-CCcEEEEECCCCEEEEECC-CCCEEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEe
Confidence 66 6666666666789999985 5555544431 1236688898 566655555
Q ss_pred ecCCcEEEEecC
Q psy710 366 HTDGTISTWAVR 377 (591)
Q Consensus 366 ~~dg~i~vwd~~ 377 (591)
...+.|+..+++
T Consensus 421 ~~n~rIr~i~~e 432 (433)
T 4hw6_A 421 CDNHRVRKIAPE 432 (433)
T ss_dssp GGGTEEEEEEEC
T ss_pred CCCCEEEEEecC
Confidence 566778877765
No 287
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=98.37 E-value=0.0062 Score=67.10 Aligned_cols=344 Identities=14% Similarity=0.104 Sum_probs=181.5
Q ss_pred CCCCcEEEeCCC------CcEEEEEeC-CCcEEEEcCCCceeEeecc--CCcceEEEEEee--cCCEEEEecCCCeEEEE
Q psy710 7 PYQPTAIAFDPI------QKLLAIGTK-TGSLRLLGRPGVDAHVRHE--TDAAVIQMQFLT--NEGALITATADDSLHLW 75 (591)
Q Consensus 7 ~~~v~~~~~spd------g~~la~g~~-dg~i~lw~~~~~~~~~~~~--h~~~v~~l~~sp--~~~~l~s~~~d~~i~vw 75 (591)
+..|.|+++.|. ++++|+|.. |++++|++++..+...... ......++.+.. ...+|..|-.||.+.-+
T Consensus 553 ~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~ 632 (1158)
T 3ei3_A 553 EHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYF 632 (1158)
T ss_dssp SSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEEEE
T ss_pred CCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEE
Confidence 568999999874 379999996 9999999988433222111 112344444432 23578888899998777
Q ss_pred eecc--cCceeeeEEEeeccceEEEEeeCCceEEEEEeCCCcEEEEEeeeeeeeceecccccccccCCCCCCCceeccCC
Q psy710 76 NFRQ--KRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSD 153 (591)
Q Consensus 76 ~~~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (591)
.++. +.....+...-...++.-..+...+..-+.+..+....++.-+ +++... ..
T Consensus 633 ~~d~~tg~l~d~r~~~LG~~pv~L~~~~~~~~~~V~a~s~rp~liy~~~-~~l~~s--~l-------------------- 689 (1158)
T 3ei3_A 633 GLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSN-HKLVFS--NV-------------------- 689 (1158)
T ss_dssp EECTTTCCEEEEEEEECCSSCCEEEEEESSSCEEEEEESSSCEEEEESS-SSEEEE--EB--------------------
T ss_pred EEcCCCCccccceeEEcCCCceEEEEEeeCCceeEEEECCCCEEEEEcC-CceEEe--cc--------------------
Confidence 6653 3222222222223444444444433332222333433333322 111100 00
Q ss_pred CCcCcceeeeccCCCCceEEEECCC--CCEEEEEeCCCcEEEeCCCC--eEEEEeccCCCcEEEEEEEcCCceEEEEeCC
Q psy710 154 NPLDPSKTFRHGFPYQPTAIAFDPI--QKLLAIGTKTGSLRLLGRPG--VDAHVRHETDAAVIQMQFLTNEGALITATAD 229 (591)
Q Consensus 154 ~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~i~d~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 229 (591)
....--....|+.. .+-++..+ ++.++|..++. .-.....+-...++.++++|+.+.++.+..+
T Consensus 690 -----------~~~~v~~~~~F~se~~~~g~v~~~-~~~LrI~~i~~~~~~~~~~ipL~~Tprri~y~~~~~~~~v~~~~ 757 (1158)
T 3ei3_A 690 -----------NLKEVNYMCPLNSDGYPDSLALAN-NSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSR 757 (1158)
T ss_dssp -----------SSSCCCEEEEECCSSSTTEEEEEC-SSCEEEEEECCSSSEEEEEEECSSEEEEEEEEGGGTEEEEEEEE
T ss_pred -----------ChHHhceEeccCcccCCCcEEEEc-CCceEEEEecccCCeeEEEEeCCCCceEEEEcCCCCEEEEEEEe
Confidence 00000123334321 12244333 44577765432 1122333334588889999887765544311
Q ss_pred -------------------------------------------------CcEEEEEccCCCcceEEeeeec-cccEEEEE
Q psy710 230 -------------------------------------------------DSLHLWNFRQKRPEIVHSLKFQ-RERITYIH 259 (591)
Q Consensus 230 -------------------------------------------------~~i~~wd~~~~~~~~~~~~~~~-~~~v~~~~ 259 (591)
+.|++.|..+. +.+..++.. ...+.+++
T Consensus 758 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~s~i~lidp~t~--~~i~~~~l~~nE~~~sv~ 835 (1158)
T 3ei3_A 758 IEVQDTSGGTTALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTF--EVLHAHQFLQNEYALSLV 835 (1158)
T ss_dssp EEEECSSSSEEESSCCHHHHCSEEEECCCCCC----------CCCEEEEEEEEEEETTTC--CEEEEEECCTTEEEEEEE
T ss_pred ccccccccccchhhhhhhhhhhhhcccccccccccccCchhhcCCceeeEEEEEEeCCCC--eEEEEEeCCCCcceEEEE
Confidence 23556665555 334433322 23344444
Q ss_pred ---ecCC-CCEEEEEe----------CCccEEEEEccCccccceeeehhhhccccccCCCCCeEEEecCCCCCCeEEEEE
Q psy710 260 ---LPLQ-SKWLYVGT----------EKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKLLLAY 325 (591)
Q Consensus 260 ---~sp~-~~~l~~~~----------~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~ 325 (591)
|..+ ..++++|+ ..|.|++|++...++. ........++|++++--. | +|++|-
T Consensus 836 ~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~----------lv~~~~v~g~v~al~~~~--g-~Lla~i 902 (1158)
T 3ei3_A 836 SCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQ----------TVAEKEVKGAVYSMVEFN--G-KLLASI 902 (1158)
T ss_dssp EECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEE----------EEEEEEESSCEEEEEEET--T-EEEEEE
T ss_pred EEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECCEEE----------EEEEEEcCCcCEEEeeeC--C-EEEEEc
Confidence 4322 46888887 3578999999754432 111123357788877443 3 555544
Q ss_pred cCCEEEEEecccceEEE-EeccCCCeeEEEEeecCCEEEEEecCCcEEEEecCCCCCceeeecccccccCCCCCCCCCcc
Q psy710 326 ETGLVVHWDLKLKRAEF-RWQCSEPIKSVCWHYEGKQFLCSHTDGTISTWAVRPLAKPVSVNQPHIKTNKDGKLEQCKPI 404 (591)
Q Consensus 326 ~dg~i~iwd~~~~~~~~-~~~~~~~v~~~~~sp~g~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 404 (591)
...|++|++...+.+. ...+-..|..+.....+++++.|+.-..|.+...+.....+..+..+. ...++
T Consensus 903 -g~~l~vy~l~~~~~L~~~~~~~~~i~~~~l~~~~~~I~vgD~~~Sv~~~~y~~~~~~L~~~a~D~---------~~~~v 972 (1158)
T 3ei3_A 903 -NSTVRLYEWTTEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDF---------NPNWM 972 (1158)
T ss_dssp -TTEEEEEEECTTSCEEEEEEECCCSCEEEEEEETTEEEEEESSBCEEEEEEETTTTEEEEEEECC---------SCBCE
T ss_pred -CCEEEEEECCCCceEEEEeeccccEEEEEEeccCCEEEEEEhhheEEEEEEEcCCCeEEEEEeec---------ccccE
Confidence 4789999998765433 222222344444444688999999888888877664344444443331 14567
Q ss_pred eEEEEe
Q psy710 405 QKVEWK 410 (591)
Q Consensus 405 ~~~~~~ 410 (591)
+++.+-
T Consensus 973 ta~~~l 978 (1158)
T 3ei3_A 973 SAVEIL 978 (1158)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 787776
No 288
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.37 E-value=0.00097 Score=62.69 Aligned_cols=274 Identities=10% Similarity=0.036 Sum_probs=143.6
Q ss_pred CCCCcEEEeCCCCcEEEEEeCCCcEEEEcCC-CceeEeec----cCCcceEEEEEeecCCEEEEecCCCeEEEEeecccC
Q psy710 7 PYQPTAIAFDPIQKLLAIGTKTGSLRLLGRP-GVDAHVRH----ETDAAVIQMQFLTNEGALITATADDSLHLWNFRQKR 81 (591)
Q Consensus 7 ~~~v~~~~~spdg~~la~g~~dg~i~lw~~~-~~~~~~~~----~h~~~v~~l~~sp~~~~l~s~~~d~~i~vw~~~~~~ 81 (591)
...+.++.|.+++..+|+| ..|.|.. ..+ +..-.... .....+.++.|.+ +. ++.++.++.|.. ..+.++
T Consensus 35 ~~~~~~v~~~~~~~~~~~G-~~g~i~~-s~DgG~tW~~~~~~~~~~~~~~~~i~~~~-~~-~~~~g~~g~i~~-S~DgG~ 109 (327)
T 2xbg_A 35 TATILDMSFIDRHHGWLVG-VNATLME-TRDGGQTWEPRTLVLDHSDYRFNSVSFQG-NE-GWIVGEPPIMLH-TTDGGQ 109 (327)
T ss_dssp SSCEEEEEESSSSCEEEEE-TTTEEEE-ESSTTSSCEECCCCCSCCCCEEEEEEEET-TE-EEEEEETTEEEE-ESSTTS
T ss_pred CCcEEEEEECCCCcEEEEc-CCCeEEE-eCCCCCCCeECCCCCCCCCccEEEEEecC-Ce-EEEEECCCeEEE-ECCCCC
Confidence 4568899998888888855 5665533 333 33322221 2345789999976 34 444455665433 223232
Q ss_pred c-eeeeEEEeeccceEEEEeeCCceEEEEEeCCCcEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCcce
Q psy710 82 P-EIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSK 160 (591)
Q Consensus 82 ~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (591)
. +.+.....+...+..+.+.+++..++++ .++.|.. ..+.++ ...
T Consensus 110 tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~g~v~~-S~DgG~--------------------------------tW~ 155 (327)
T 2xbg_A 110 SWSQIPLDPKLPGSPRLIKALGNGSAEMIT-NVGAIYR-TKDSGK--------------------------------NWQ 155 (327)
T ss_dssp SCEECCCCTTCSSCEEEEEEEETTEEEEEE-TTCCEEE-ESSTTS--------------------------------SEE
T ss_pred CceECccccCCCCCeEEEEEECCCCEEEEe-CCccEEE-EcCCCC--------------------------------CCE
Confidence 1 1111111123456777777777666655 3454322 111111 001
Q ss_pred eeeccCCCCceEEEECCCCCEEEEEeCCCcEEEeCC--CCeEEEEeccCCCcEEEEEEEcCCceEEEEeCCCcEEEEEcc
Q psy710 161 TFRHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGR--PGVDAHVRHETDAAVIQMQFLTNEGALITATADDSLHLWNFR 238 (591)
Q Consensus 161 ~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~--~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~ 238 (591)
....+....+..+++.+++.+++++...+..+-.|- .+-+... ......+..+.+.+++..+ .++.+|.+++.+..
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW~~~~-~~~~~~~~~~~~~~~g~~~-~~~~~G~~~~s~~D 233 (327)
T 2xbg_A 156 ALVQEAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEPHN-RTTSRRLHNMGFTPDGRLW-MIVNGGKIAFSDPD 233 (327)
T ss_dssp EEECSCCCCEEEEEECTTSCEEEEETTSSEEEEECTTCSSCEEEE-CCSSSCEEEEEECTTSCEE-EEETTTEEEEEETT
T ss_pred EeecCCCcceEEEEEcCCCcEEEEECCCcEEEEeCCCCCceeECC-CCCCCccceeEECCCCCEE-EEeCCceEEEecCC
Confidence 111123345788999999887776654433333443 2222222 2234578889999888655 45567877766422
Q ss_pred CCCcceEEeeee----ccccEEEEEecCCCCEEEEEeCCccEEEEEccCccccceeeehhhhccccccCCCCCeEEEecC
Q psy710 239 QKRPEIVHSLKF----QRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDN 314 (591)
Q Consensus 239 ~~~~~~~~~~~~----~~~~v~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s 314 (591)
.+ +....+.. ....+..+.+.+++..++++. ++.+. +..+.++. |.. ..........+.++.|.
T Consensus 234 ~G--~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~-~g~i~-~S~DgG~t------W~~--~~~~~~~~~~~~~v~~~ 301 (327)
T 2xbg_A 234 NS--ENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGG-AGALL-CSQDGGQT------WQQ--DVDVKKVPSNFYKILFF 301 (327)
T ss_dssp EE--EEECCCBCTTSSCCSCEEEEEESSSSCEEEEES-TTCEE-EESSTTSS------CEE--CGGGTTSSSCCCEEEEE
T ss_pred CC--CeeEeccCCcccCCcceEEEEecCCCEEEEEeC-CCeEE-EeCCCCcc------cEE--cCccCCCCCCeEEEEEE
Confidence 22 22222221 123588899988877666654 67663 33333322 110 00111223456778886
Q ss_pred CCCCCeEEEEEcCCEEEEEec
Q psy710 315 PLDPSKLLLAYETGLVVHWDL 335 (591)
Q Consensus 315 p~~~~~l~~~~~dg~i~iwd~ 335 (591)
+ + ..+++++.+|.|.-++-
T Consensus 302 ~-~-~~~~~~G~~G~i~~~~~ 320 (327)
T 2xbg_A 302 S-P-DQGFILGQKGILLRYVT 320 (327)
T ss_dssp E-T-TEEEEECSTTEEEEECC
T ss_pred C-C-CceEEEcCCceEEEEcC
Confidence 5 4 45667778898766653
No 289
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=98.36 E-value=0.0055 Score=67.48 Aligned_cols=324 Identities=10% Similarity=0.041 Sum_probs=164.3
Q ss_pred CCcEEEeCCCCcEEEEEeCCCcEEEEcCCCceeEe--eccCCcceEEEEEeec------CCEEEEecC-CCeEEEEeecc
Q psy710 9 QPTAIAFDPIQKLLAIGTKTGSLRLLGRPGVDAHV--RHETDAAVIQMQFLTN------EGALITATA-DDSLHLWNFRQ 79 (591)
Q Consensus 9 ~v~~~~~spdg~~la~g~~dg~i~lw~~~~~~~~~--~~~h~~~v~~l~~sp~------~~~l~s~~~-d~~i~vw~~~~ 79 (591)
.|.+.+.+. .+++.++ ++.+.++.++...+.. -..-...|.|+++.|. +++++.|.. |++++|+++.+
T Consensus 515 ~I~~As~n~--~~vvva~-g~~l~~fel~~~~L~~~~~~~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~ 591 (1158)
T 3ei3_A 515 NISVASCNS--SQVVVAV-GRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPS 591 (1158)
T ss_dssp CCCEEEECS--SEEEEEE-TTEEEEEEEETTEEEEEEEEECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTT
T ss_pred EEEEEEeCC--CEEEEEE-CCEEEEEEeeCCceeeecccCCCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCC
Confidence 466666553 3555554 5678777765222221 1223568999999864 368999986 99999999986
Q ss_pred cCceeeeEEEeeccceEEEEee--CCceEEEEEeCCCcEEEEEeee--eeeeceecccccccccCCCCCCCceeccCCCC
Q psy710 80 KRPEIVHSLKFQRERITYIHLP--LQSKWLYVGTEKGNIHVVNIES--FTLSGYIINWNKAIDVCMKTHPGPIIHLSDNP 155 (591)
Q Consensus 80 ~~~~~~~~~~~~~~~v~~~~~~--~~~~~l~~~~~d~~i~vwd~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (591)
.+......+.. .....++.+. ....+|.+|-.||.+..+.+.. +++...-
T Consensus 592 l~~~~~~~L~~-~~~p~si~l~~~~~~~~L~igl~dG~l~~~~~d~~tg~l~d~r------------------------- 645 (1158)
T 3ei3_A 592 FELLHKEMLGG-EIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRK------------------------- 645 (1158)
T ss_dssp CCEEEEEECCS-SCCEEEEEEEEETTEEEEEEEETTSEEEEEEECTTTCCEEEEE-------------------------
T ss_pred CCeEEEEECCC-CCCCcEEEEEEeCCCcEEEEEeCCCeEEEEEEcCCCCccccce-------------------------
Confidence 54222222221 1223334332 2446788888899887666542 2221110
Q ss_pred cCcceeeeccCCCCceEEEECCCCCEEEEEeCCCcEEEeCCCCeEEEEeccCCCcEE-EEEEEcC--CceEEEEeCCCcE
Q psy710 156 LDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGVDAHVRHETDAAVI-QMQFLTN--EGALITATADDSL 232 (591)
Q Consensus 156 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~v~-~~~~~~~--~~~l~~~~~d~~i 232 (591)
....| ..++.-..+...+..-+.+..+....+|..++. .....-....+. ...|+.. ..-++..+ ++.+
T Consensus 646 -----~~~LG-~~pv~L~~~~~~~~~~V~a~s~rp~liy~~~~~-l~~s~l~~~~v~~~~~F~se~~~~g~v~~~-~~~L 717 (1158)
T 3ei3_A 646 -----KVTLG-TQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHK-LVFSNVNLKEVNYMCPLNSDGYPDSLALAN-NSTL 717 (1158)
T ss_dssp -----EEECC-SSCCEEEEEESSSCEEEEEESSSCEEEEESSSS-EEEEEBSSSCCCEEEEECCSSSTTEEEEEC-SSCE
T ss_pred -----eEEcC-CCceEEEEEeeCCceeEEEECCCCEEEEEcCCc-eEEeccChHHhceEeccCcccCCCcEEEEc-CCce
Confidence 00011 112222223222322222222333333332222 221111111232 2334322 12355444 4569
Q ss_pred EEEEccCCCcceEEeeeeccccEEEEEecCCCCEEEEEeCCc--------------------------------------
Q psy710 233 HLWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEKG-------------------------------------- 274 (591)
Q Consensus 233 ~~wd~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg-------------------------------------- 274 (591)
+|..+.....-.++.+.-. ..+..++++|+.+.++++..+.
T Consensus 718 rI~~i~~~~~~~~~~ipL~-~Tprri~y~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 (1158)
T 3ei3_A 718 TIGTIDEIQKLHIRTVPLY-ESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSKLFSSSTAPH 796 (1158)
T ss_dssp EEEEECCSSSEEEEEEECS-SEEEEEEEEGGGTEEEEEEEEEEEECSSSSEEESSCCHHHHCSEEEECCCCCC-------
T ss_pred EEEEecccCCeeEEEEeCC-CCceEEEEcCCCCEEEEEEEeccccccccccchhhhhhhhhhhhhcccccccccccccCc
Confidence 9998865432344444443 5678888888877666554221
Q ss_pred -----------cEEEEEccCccccceeeehhhhccccccCCCCCeEE---EecCCCCCCeEEEEE----------cCCEE
Q psy710 275 -----------NIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIH---LSDNPLDPSKLLLAY----------ETGLV 330 (591)
Q Consensus 275 -----------~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~---~~~sp~~~~~l~~~~----------~dg~i 330 (591)
.|++.|-.+.+... ...+.. ...+.+ +.|......++++|. ..|.|
T Consensus 797 ~~~~g~~~~~s~i~lidp~t~~~i~---------~~~l~~-nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri 866 (1158)
T 3ei3_A 797 ETSFGEEVEVHNLLIIDQHTFEVLH---------AHQFLQ-NEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRI 866 (1158)
T ss_dssp ---CCCEEEEEEEEEEETTTCCEEE---------EEECCT-TEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEE
T ss_pred hhhcCCceeeEEEEEEeCCCCeEEE---------EEeCCC-CcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEE
Confidence 12233322222110 011111 122333 345441246888876 34889
Q ss_pred EEEecccceEEEEe--ccCCCeeEEEEeecCCEEEEEecCCcEEEEecCCCCCcee
Q psy710 331 VHWDLKLKRAEFRW--QCSEPIKSVCWHYEGKQFLCSHTDGTISTWAVRPLAKPVS 384 (591)
Q Consensus 331 ~iwd~~~~~~~~~~--~~~~~v~~~~~sp~g~~l~s~~~dg~i~vwd~~~~~~~~~ 384 (591)
++|++..+++.... ..++.|++++-- +|++|++. ..+|++|++. ..+.+.
T Consensus 867 ~vf~v~~~kL~lv~~~~v~g~v~al~~~-~g~Lla~i--g~~l~vy~l~-~~~~L~ 918 (1158)
T 3ei3_A 867 VVFQYSDGKLQTVAEKEVKGAVYSMVEF-NGKLLASI--NSTVRLYEWT-TEKELR 918 (1158)
T ss_dssp EEEEEETTEEEEEEEEEESSCEEEEEEE-TTEEEEEE--TTEEEEEEEC-TTSCEE
T ss_pred EEEEEECCEEEEEEEEEcCCcCEEEeee-CCEEEEEc--CCEEEEEECC-CCceEE
Confidence 99999865544333 367888888643 56444433 4789999998 334333
No 290
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.34 E-value=0.00046 Score=64.44 Aligned_cols=228 Identities=14% Similarity=0.092 Sum_probs=136.4
Q ss_pred EEEEEeCCCcEEEEcCCCc--eeEeeccCCcceEEEEEeecCCEEE-EecCCCeEEEEeecccCceeeeEEEeeccceEE
Q psy710 21 LLAIGTKTGSLRLLGRPGV--DAHVRHETDAAVIQMQFLTNEGALI-TATADDSLHLWNFRQKRPEIVHSLKFQRERITY 97 (591)
Q Consensus 21 ~la~g~~dg~i~lw~~~~~--~~~~~~~h~~~v~~l~~sp~~~~l~-s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~ 97 (591)
+|+.+. ...|+..++++. ....+.........++|.+.++.|+ +-...+.|..++++.... ....+...-.....
T Consensus 6 ~ll~~~-~~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~-~~~~~~~~l~~p~g 83 (318)
T 3sov_A 6 LLLYAN-RRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTES-VQNVVVSGLLSPDG 83 (318)
T ss_dssp EEEEEC-EEEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSC-CCEEEEECCSCCCE
T ss_pred EEEEEc-cCeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCc-eEEEEcCCCCCccE
Confidence 444443 457889998854 2222222234567899998766555 444578898888876531 11122222245667
Q ss_pred EEeeCCceEE-EEEeCCCcEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEEC
Q psy710 98 IHLPLQSKWL-YVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFD 176 (591)
Q Consensus 98 ~~~~~~~~~l-~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 176 (591)
+++.+.+..| ++-...+.|.++++...... .+. ......+..++++
T Consensus 84 lavd~~~g~ly~~d~~~~~I~~~~~dG~~~~-~l~--------------------------------~~~~~~P~giavd 130 (318)
T 3sov_A 84 LACDWLGEKLYWTDSETNRIEVSNLDGSLRK-VLF--------------------------------WQELDQPRAIALD 130 (318)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSCSCE-EEE--------------------------------CSSCSSEEEEEEE
T ss_pred EEEEcCCCeEEEEECCCCEEEEEECCCCcEE-EEE--------------------------------eCCCCCccEEEEe
Confidence 8888754444 44445678888887642211 110 1122446899999
Q ss_pred CCCCEEEEEeC--CCcEEEeCCCCeEEEEe-ccCCCcEEEEEEEcCCceEEEEe-CCCcEEEEEccCCCcceEEeeeecc
Q psy710 177 PIQKLLAIGTK--TGSLRLLGRPGVDAHVR-HETDAAVIQMQFLTNEGALITAT-ADDSLHLWNFRQKRPEIVHSLKFQR 252 (591)
Q Consensus 177 ~~~~~l~~~~~--dg~i~i~d~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~~wd~~~~~~~~~~~~~~~~ 252 (591)
|.+..|+.... .+.|..++..+...... ...-.....++++++++.|+.+. ..+.|..+|+.....+.+ .....
T Consensus 131 p~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~--~~~~~ 208 (318)
T 3sov_A 131 PSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAV--VKGSL 208 (318)
T ss_dssp GGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE--ECSCC
T ss_pred CCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEE--ecCCC
Confidence 97666666553 57888888775433222 22234678999999777777664 457899999875432222 22233
Q ss_pred ccEEEEEecCCCCEEEEEeCCccEEEEEccCccc
Q psy710 253 ERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTL 286 (591)
Q Consensus 253 ~~v~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~ 286 (591)
.....+++.. +.++++-...+.|..++..+++.
T Consensus 209 ~~P~glav~~-~~lywtd~~~~~V~~~~~~~G~~ 241 (318)
T 3sov_A 209 PHPFALTLFE-DILYWTDWSTHSILACNKYTGEG 241 (318)
T ss_dssp SCEEEEEEET-TEEEEEETTTTEEEEEETTTCCS
T ss_pred CCceEEEEeC-CEEEEEecCCCeEEEEECCCCCc
Confidence 4566777753 34455555667888888876654
No 291
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.33 E-value=0.0044 Score=63.68 Aligned_cols=195 Identities=10% Similarity=0.014 Sum_probs=113.5
Q ss_pred CCcEEEeCCCCcEEE-EEeCCCcEEEEcCCCceeEee-ccCCcceEEEEEeecCCEEE-EecCCCeEEEEeecccCceee
Q psy710 9 QPTAIAFDPIQKLLA-IGTKTGSLRLLGRPGVDAHVR-HETDAAVIQMQFLTNEGALI-TATADDSLHLWNFRQKRPEIV 85 (591)
Q Consensus 9 ~v~~~~~spdg~~la-~g~~dg~i~lw~~~~~~~~~~-~~h~~~v~~l~~sp~~~~l~-s~~~d~~i~vw~~~~~~~~~~ 85 (591)
.+..++|++++..|. +-..++.|..+++++.....+ .........+++.+.++.|+ +-...+.|.+.+++......+
T Consensus 38 ~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l 117 (628)
T 4a0p_A 38 EASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVL 117 (628)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEEE
T ss_pred ceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEE
Confidence 466899998665555 445678899998886544433 22234577889987766555 445568899988876532111
Q ss_pred eEEEeeccceEEEEeeCCceEEEEEeC--CCcEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCcceeee
Q psy710 86 HSLKFQRERITYIHLPLQSKWLYVGTE--KGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFR 163 (591)
Q Consensus 86 ~~~~~~~~~v~~~~~~~~~~~l~~~~~--d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (591)
+...-.....+++.|....|+.... .+.|...++.........
T Consensus 118 --~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~--------------------------------- 162 (628)
T 4a0p_A 118 --VWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLV--------------------------------- 162 (628)
T ss_dssp --ECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEE---------------------------------
T ss_pred --EeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEE---------------------------------
Confidence 1123345789999986555555542 456666665432211111
Q ss_pred ccCCCCceEEEECCCCCEEEEEe-CCCcEEEeCCCCeEEEEeccCCCcEEEEEEEcCCceEEEEeCCCcEEEEEccCC
Q psy710 164 HGFPYQPTAIAFDPIQKLLAIGT-KTGSLRLLGRPGVDAHVRHETDAAVIQMQFLTNEGALITATADDSLHLWNFRQK 240 (591)
Q Consensus 164 ~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~ 240 (591)
..-..+..++++++++.|..+. ..+.|..+++.+...............+++.. +..+++-...+.|...|..++
T Consensus 163 -~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~~v~~~~l~~P~glav~~-~~ly~tD~~~~~I~~~dk~tg 238 (628)
T 4a0p_A 163 -PNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNREVIADDLPHPFGLTQYQ-DYIYWTDWSRRSIERANKTSG 238 (628)
T ss_dssp -CSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECCSCEEEEEEET-TEEEEEETTTTEEEEEETTTC
T ss_pred -CCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCceEEeeccCCCceEEEEEC-CEEEEecCCCCEEEEEECCCC
Confidence 0123468899999766555554 46778888876543222222223445666654 333333344566777775443
No 292
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.32 E-value=0.00051 Score=63.51 Aligned_cols=192 Identities=10% Similarity=0.145 Sum_probs=122.9
Q ss_pred CcEEEEEeCCCcEEEEcCCCceeEeeccCCcceEEEEEeec----CC---EEEEec-C--CCeEEEEeecccCceeeeEE
Q psy710 19 QKLLAIGTKTGSLRLLGRPGVDAHVRHETDAAVIQMQFLTN----EG---ALITAT-A--DDSLHLWNFRQKRPEIVHSL 88 (591)
Q Consensus 19 g~~la~g~~dg~i~lw~~~~~~~~~~~~h~~~v~~l~~sp~----~~---~l~s~~-~--d~~i~vw~~~~~~~~~~~~~ 88 (591)
..+++.....+-+.+||++++.++.+.. +.++.+..-|+ |+ ++++.. . +++|++|+++.... .+..+
T Consensus 40 ~s~ii~t~k~~gL~Vydl~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~-~l~~i 116 (355)
T 3amr_A 40 NSKLITTNKKSGLVVYSLDGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNG-TLQSM 116 (355)
T ss_dssp GCEEEEEETTTEEEEEETTSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTC-CEEEC
T ss_pred ccEEEEEcCCCCEEEEcCCCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCC-ceeec
Confidence 3455555677889999999999988764 56777777664 22 223333 3 58999998852221 23333
Q ss_pred Ee------ec-cceEEEEe--eCC-ce-EEEEEeCCCcEEEEEeee-------eeeeceecccccccccCCCCCCCceec
Q psy710 89 KF------QR-ERITYIHL--PLQ-SK-WLYVGTEKGNIHVVNIES-------FTLSGYIINWNKAIDVCMKTHPGPIIH 150 (591)
Q Consensus 89 ~~------~~-~~v~~~~~--~~~-~~-~l~~~~~d~~i~vwd~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (591)
.. .. ..++.+++ +|. ++ ++++...+|.+..|++.. .+.++.+.
T Consensus 117 ~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~------------------- 177 (355)
T 3amr_A 117 TDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFK------------------- 177 (355)
T ss_dssp SCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEE-------------------
T ss_pred cccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEec-------------------
Confidence 11 11 45666777 664 43 577778889999999843 23333322
Q ss_pred cCCCCcCcceeeeccCCCCceEEEECCCCCEEEEEeCCCcEEEeCCC-----CeEEEEeccC---CCcEEEEEEE--cCC
Q psy710 151 LSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRP-----GVDAHVRHET---DAAVIQMQFL--TNE 220 (591)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~-----~~~~~~~~~~---~~~v~~~~~~--~~~ 220 (591)
..+.+..++.++....|+++-++..|..|+.+ +.+.+..... ...+..|++- +++
T Consensus 178 ---------------lgsq~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g 242 (355)
T 3amr_A 178 ---------------MNSQTEGMAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADG 242 (355)
T ss_dssp ---------------CSSCEEEEEEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGG
T ss_pred ---------------CCCCcceEEEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCC
Confidence 23567889999988899999998778777754 2334433322 3468888874 445
Q ss_pred c-eEEEEe-CCCcEEEEEcc-CCCcceEEeee
Q psy710 221 G-ALITAT-ADDSLHLWNFR-QKRPEIVHSLK 249 (591)
Q Consensus 221 ~-~l~~~~-~d~~i~~wd~~-~~~~~~~~~~~ 249 (591)
+ +|++++ .++++.+||.. +. +.+..+.
T Consensus 243 ~gyLivSsQG~~s~~Vydr~~~~--~~vg~f~ 272 (355)
T 3amr_A 243 KGYLMASSQGNSSYAIYDRQGKN--KYVADFR 272 (355)
T ss_dssp CEEEEEEEGGGTEEEEEESSTTC--CEEEEEE
T ss_pred CEEEEEEcCCCCEEEEEECCCCC--cEEEEEE
Confidence 5 666655 56789999996 33 4555553
No 293
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.32 E-value=0.00044 Score=64.60 Aligned_cols=233 Identities=11% Similarity=0.032 Sum_probs=136.8
Q ss_pred EEEEecCCCeEEEEeecccCceeeeEEEeeccceEEEEeeCCceEEEEEe-CCCcEEEEEeeeeeeeceecccccccccC
Q psy710 62 ALITATADDSLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGT-EKGNIHVVNIESFTLSGYIINWNKAIDVC 140 (591)
Q Consensus 62 ~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~vwd~~~~~~~~~~~~~~~~~~~~ 140 (591)
+|+.+. ...|+..+++.........+. ....+.+++|.+.++.|+... ..+.|..+++........+
T Consensus 6 ~ll~~~-~~~I~~i~l~~~~~~~~~~~~-~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~---------- 73 (318)
T 3sov_A 6 LLLYAN-RRDLRLVDATNGKENATIVVG-GLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNV---------- 73 (318)
T ss_dssp EEEEEC-EEEEEEEETTCTTSCCEEEEE-EEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEE----------
T ss_pred EEEEEc-cCeEEEEECCCCceEEEEEec-CCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEE----------
Confidence 444443 467888888765311222222 224567899998665555544 4677888877653211100
Q ss_pred CCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCCC-CEEEEEeCCCcEEEeCCCCeEEEEe-ccCCCcEEEEEEEc
Q psy710 141 MKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQ-KLLAIGTKTGSLRLLGRPGVDAHVR-HETDAAVIQMQFLT 218 (591)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~-~~~~~~v~~~~~~~ 218 (591)
+ ......+..+++++.+ +++++-...+.|.+++..+...... .........+++.|
T Consensus 74 ---------------------~-~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp 131 (318)
T 3sov_A 74 ---------------------V-VSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDP 131 (318)
T ss_dssp ---------------------E-EECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEG
T ss_pred ---------------------E-cCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeC
Confidence 0 0112345789999754 4445555678899998876533322 23345678999999
Q ss_pred CCceEEEEeC--CCcEEEEEccCCCcceEEeeeeccccEEEEEecCCCCEEEEEe-CCccEEEEEccCccccceeeehhh
Q psy710 219 NEGALITATA--DDSLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGT-EKGNIHVVNIESFTLSGYIINWNK 295 (591)
Q Consensus 219 ~~~~l~~~~~--d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~ 295 (591)
.+..|+.+.. .+.|...++.... ........-.....++++|++..|+.+. ..+.|..+|+......
T Consensus 132 ~~g~ly~td~~~~~~I~r~~~dG~~--~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~-------- 201 (318)
T 3sov_A 132 SSGFMYWTDWGEVPKIERAGMDGSS--RFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQ-------- 201 (318)
T ss_dssp GGTEEEEEECSSSCEEEEEETTSCS--CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE--------
T ss_pred CCCEEEEEecCCCCEEEEEEcCCCC--eEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceE--------
Confidence 7777766653 5778888887542 2222222234578999999777676654 4568999998753321
Q ss_pred hccccccCCCCCeEEEecCCCCCCeEEEEEcCCEEEEEecccceEEEE
Q psy710 296 AIDVCMKTHPGPIIHLSDNPLDPSKLLLAYETGLVVHWDLKLKRAEFR 343 (591)
Q Consensus 296 ~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~iwd~~~~~~~~~ 343 (591)
............+++.. +..+.+-...+.|..++..+++....
T Consensus 202 ---~~~~~~~~~P~glav~~--~~lywtd~~~~~V~~~~~~~G~~~~~ 244 (318)
T 3sov_A 202 ---AVVKGSLPHPFALTLFE--DILYWTDWSTHSILACNKYTGEGLRE 244 (318)
T ss_dssp ---EEECSCCSCEEEEEEET--TEEEEEETTTTEEEEEETTTCCSCEE
T ss_pred ---EEecCCCCCceEEEEeC--CEEEEEecCCCeEEEEECCCCCceEE
Confidence 01122334556677643 34444444567888888766654333
No 294
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.23 E-value=0.0014 Score=68.93 Aligned_cols=240 Identities=9% Similarity=0.008 Sum_probs=140.7
Q ss_pred CcEEEeCCCCcEEEEEeCCCcEEEEcCCCceeEeeccCCcceEEEEEeecCCEEE-EecCCCeEEEEeecccCc--eeee
Q psy710 10 PTAIAFDPIQKLLAIGTKTGSLRLLGRPGVDAHVRHETDAAVIQMQFLTNEGALI-TATADDSLHLWNFRQKRP--EIVH 86 (591)
Q Consensus 10 v~~~~~spdg~~la~g~~dg~i~lw~~~~~~~~~~~~h~~~v~~l~~sp~~~~l~-s~~~d~~i~vw~~~~~~~--~~~~ 86 (591)
-++.+..+.. +|+.+. ...|+..++.+.....+......+..|+|.+.+..|+ +-...+.|+.+++..... ....
T Consensus 387 ~~C~~~~~~p-~Ll~an-~~~Ir~i~l~~~~~~~l~~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~ 464 (791)
T 3m0c_C 387 KACKAVGSIA-YLFFTN-RHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDT 464 (791)
T ss_dssp CCCEETTSCC-EEEEEC-BSSEEEECTTSCCCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEE
T ss_pred ceeeeccccc-cccccc-ccceeEeeccCCcceeeecCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeE
Confidence 3455544333 444443 3568888888665555555566788999998666555 444567888888875311 1122
Q ss_pred EEEeeccceEEEEeeCCceEEEEEe-CCCcEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCcceeeecc
Q psy710 87 SLKFQRERITYIHLPLQSKWLYVGT-EKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHG 165 (591)
Q Consensus 87 ~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (591)
.+.........|++.+.++.|+.+. ..+.|.+.++........+ ..
T Consensus 465 vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~---------------------------------~~ 511 (791)
T 3m0c_C 465 VISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLF---------------------------------RE 511 (791)
T ss_dssp EECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEE---------------------------------EC
T ss_pred EEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEE---------------------------------eC
Confidence 2222334567889987775555544 4678888887643211111 11
Q ss_pred CCCCceEEEECCCCCEEEEEeC--CCcEEEeCCCCeEEEEecc-CCCcEEEEEEEcCCceEEEEe-CCCcEEEEEccCCC
Q psy710 166 FPYQPTAIAFDPIQKLLAIGTK--TGSLRLLGRPGVDAHVRHE-TDAAVIQMQFLTNEGALITAT-ADDSLHLWNFRQKR 241 (591)
Q Consensus 166 ~~~~v~~~~~~~~~~~l~~~~~--dg~i~i~d~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~-~d~~i~~wd~~~~~ 241 (591)
....+..|+++|.+..|+.... .+.|...++.+........ .-.....|++.+.++.|+.+. ..+.|..+++....
T Consensus 512 ~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~ 591 (791)
T 3m0c_C 512 NGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGN 591 (791)
T ss_dssp TTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred CCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCc
Confidence 2234689999997666665553 2678888887765543333 235788999998877777764 45678999987653
Q ss_pred cceEEeeeeccccEEEEEecCCCCEEEE-EeCCccEEEEEccCccc
Q psy710 242 PEIVHSLKFQRERITYIHLPLQSKWLYV-GTEKGNIHVVNIESFTL 286 (591)
Q Consensus 242 ~~~~~~~~~~~~~v~~~~~sp~~~~l~~-~~~dg~i~i~d~~~~~~ 286 (591)
...+..-...-.....|++. +..|+. -...+.|...+..+++.
T Consensus 592 ~~~v~~~~~~l~~P~glav~--~~~lYwtD~~~~~I~~~dk~tG~~ 635 (791)
T 3m0c_C 592 RKTILEDEKRLAHPFSLAVF--EDKVFWTDIINEAIFSANRLTGSD 635 (791)
T ss_dssp CEEEEECTTTTSSEEEEEEE--TTEEEEEETTTTEEEEEETTTCCC
T ss_pred eEEEecCCCccCCCCEEEEe--CCEEEEEECCCCEEEEEeCCCCcc
Confidence 22222111111234566663 334444 44556777777666544
No 295
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.19 E-value=0.0007 Score=62.59 Aligned_cols=198 Identities=12% Similarity=0.134 Sum_probs=125.4
Q ss_pred CCCEEEEEeCCCcEEEeCCCCeEEEEeccCCCcEEEEEEEcC----Cc---eEEEEeC---CCcEEEEEccCCCcceEEe
Q psy710 178 IQKLLAIGTKTGSLRLLGRPGVDAHVRHETDAAVIQMQFLTN----EG---ALITATA---DDSLHLWNFRQKRPEIVHS 247 (591)
Q Consensus 178 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~----~~---~l~~~~~---d~~i~~wd~~~~~~~~~~~ 247 (591)
...+++.....+-+.+||+.+........ ..++.+..-|+ |+ ++++... +++|.+|++.... ..+..
T Consensus 39 ~~s~ii~t~k~~gL~Vydl~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~-~~l~~ 115 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSLDGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKN-GTLQS 115 (355)
T ss_dssp GGCEEEEEETTTEEEEEETTSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTT-CCEEE
T ss_pred CccEEEEEcCCCCEEEEcCCCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCC-Cceee
Confidence 44566666778889999996666555433 36777776663 32 2333333 5789999884322 13444
Q ss_pred eee------cc-ccEEEEEe--cCC-CC-EEEEEeCCccEEEEEccC---ccccceeeehhhhccccccCCCCCeEEEec
Q psy710 248 LKF------QR-ERITYIHL--PLQ-SK-WLYVGTEKGNIHVVNIES---FTLSGYIINWNKAIDVCMKTHPGPIIHLSD 313 (591)
Q Consensus 248 ~~~------~~-~~v~~~~~--sp~-~~-~l~~~~~dg~i~i~d~~~---~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 313 (591)
+.. .. ..+..+++ +|. ++ ++++...+|.+..|++.. ++..... .+.+.. .+.+..+..
T Consensus 116 i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~l-------VR~f~l-gsq~Egcvv 187 (355)
T 3amr_A 116 MTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKK-------VRAFKM-NSQTEGMAA 187 (355)
T ss_dssp CSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEE-------EEEEEC-SSCEEEEEE
T ss_pred ccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceE-------EEEecC-CCCcceEEE
Confidence 421 11 44556666 774 43 688888999999999843 2222111 112222 356888999
Q ss_pred CCCCCCeEEEEEcCCEEEEEecc-----cceEEEEecc---CCCeeEEEEe--ecCC-EEEEEe-cCCcEEEEecCCCCC
Q psy710 314 NPLDPSKLLLAYETGLVVHWDLK-----LKRAEFRWQC---SEPIKSVCWH--YEGK-QFLCSH-TDGTISTWAVRPLAK 381 (591)
Q Consensus 314 sp~~~~~l~~~~~dg~i~iwd~~-----~~~~~~~~~~---~~~v~~~~~s--p~g~-~l~s~~-~dg~i~vwd~~~~~~ 381 (591)
.+ ...+|+.+-++.-|..++.+ +++++..+.. ...+..|+.- ++++ +|++++ .++++.+||...+.+
T Consensus 188 Dd-~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~~~ 266 (355)
T 3amr_A 188 DD-EYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGKNK 266 (355)
T ss_dssp ET-TTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCC
T ss_pred cC-CCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCCCc
Confidence 88 88999999999877777755 3556666542 3578888884 5555 666665 677899999974555
Q ss_pred ceeeec
Q psy710 382 PVSVNQ 387 (591)
Q Consensus 382 ~~~~~~ 387 (591)
.+..+.
T Consensus 267 ~vg~f~ 272 (355)
T 3amr_A 267 YVADFR 272 (355)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 555553
No 296
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.08 E-value=0.0024 Score=62.62 Aligned_cols=252 Identities=12% Similarity=0.041 Sum_probs=138.9
Q ss_pred CCcEEEeCC-CC-cEEEEEeCCCcEEEEcCCCceeEeeccC----CcceEEEEE-------eecCCEEEEecCCC-----
Q psy710 9 QPTAIAFDP-IQ-KLLAIGTKTGSLRLLGRPGVDAHVRHET----DAAVIQMQF-------LTNEGALITATADD----- 70 (591)
Q Consensus 9 ~v~~~~~sp-dg-~~la~g~~dg~i~lw~~~~~~~~~~~~h----~~~v~~l~~-------sp~~~~l~s~~~d~----- 70 (591)
....|+|+| ++ +++++-...+.|++.|++...+..+..- ......++| ++++++|+.+...+
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~ 219 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE 219 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence 456899999 34 4444444446788899887666655322 235899999 99999777665543
Q ss_pred --eEEEEeecc-cCcee---eeEEEeeccceEEEEeeCCceEEEEE-eCCCcEEEEEee-------eeeeeceecccccc
Q psy710 71 --SLHLWNFRQ-KRPEI---VHSLKFQRERITYIHLPLQSKWLYVG-TEKGNIHVVNIE-------SFTLSGYIINWNKA 136 (591)
Q Consensus 71 --~i~vw~~~~-~~~~~---~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~vwd~~-------~~~~~~~~~~~~~~ 136 (591)
.|.+.+... +.... ...+... .....++++|++..|+.+ ..++.|..+|+. ++..-.....
T Consensus 220 ~~~V~~i~r~~~G~~~~~~~~~~v~~~-~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~---- 294 (496)
T 3kya_A 220 SPSVYIIKRNADGTFDDRSDIQLIAAY-KQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVK---- 294 (496)
T ss_dssp EEEEEEEECCTTSCCSTTSCEEEEEEE-SCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGG----
T ss_pred CceEEEEecCCCCceeecccceeeccC-CCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccccc----
Confidence 245554333 12110 0222222 234578889965555554 457789999987 3332000000
Q ss_pred cccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCCCCEEEEE-eCCCcEEEeCC--CCeE-----EEEec-cC
Q psy710 137 IDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIG-TKTGSLRLLGR--PGVD-----AHVRH-ET 207 (591)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~i~d~--~~~~-----~~~~~-~~ 207 (591)
.... .....+..+.......++|+|+++.|.++ +..+.|+.++. .... ..... ..
T Consensus 295 --------------~~~g--~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~ 358 (496)
T 3kya_A 295 --------------NNPN--TFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQ 358 (496)
T ss_dssp --------------GCTT--TEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTB
T ss_pred --------------cccc--ccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCC
Confidence 0000 00000111223456899999999955444 55778888554 3322 12111 00
Q ss_pred ------------CCcEE-EEEEE-------cCCceEEEEeCCCcEEEEEccCCCcceEEeeeec----------------
Q psy710 208 ------------DAAVI-QMQFL-------TNEGALITATADDSLHLWNFRQKRPEIVHSLKFQ---------------- 251 (591)
Q Consensus 208 ------------~~~v~-~~~~~-------~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~---------------- 251 (591)
-.... .+... +++.++++=..+..|+.++. .+ .+.++.+.
T Consensus 359 ~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~~-~G---~v~TiaG~g~~~~~~~~~~~G~~d 434 (496)
T 3kya_A 359 SGYRDDVGTEARMNNPCQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVTP-EG---IVSTYAGRGASTSLADGNQWGTDD 434 (496)
T ss_dssp CCCBCCBGGGCBCSSEEEEEEEECTTCCSSCCEEEEEEEGGGTEEEEECT-TC---BEEEEEESCTTHHHHHSCSCCCCC
T ss_pred CcccCCcccccccCCCeEEEEEccccccccCCCeEEEEECCCCEEEEEeC-CC---CEEEEecccccccccCccccccCC
Confidence 01233 34444 34555555566778888883 33 23343321
Q ss_pred --------cccEEEEEecCC-CCEEEEEeCCccEEEEEccCcc
Q psy710 252 --------RERITYIHLPLQ-SKWLYVGTEKGNIHVVNIESFT 285 (591)
Q Consensus 252 --------~~~v~~~~~sp~-~~~l~~~~~dg~i~i~d~~~~~ 285 (591)
-.....++++++ +.++++=+.+.+|+.++++...
T Consensus 435 G~~~~~a~f~~P~gIavd~~~g~lyVaD~~N~rIrki~~~~~~ 477 (496)
T 3kya_A 435 GDLREVARFRDVSGLVYDDVKEMFYVHDQVGHTIRTISMEQEE 477 (496)
T ss_dssp EETTTTCCCSSEEEEEEETTTTEEEEEETTTTEEEEEEECCCC
T ss_pred CCchhhhhcCCCcEEEEECCCCEEEEEeCCCCEEEEEECCCCc
Confidence 123678899886 6655555567789988887643
No 297
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=98.08 E-value=0.0018 Score=61.54 Aligned_cols=239 Identities=13% Similarity=0.132 Sum_probs=121.0
Q ss_pred CCcEEEeCCCCcEEEEEeCCCcEEEEcCCCce--eEee---ccCCcceEEEEEeec---CCEEEEecC-C-----CeEEE
Q psy710 9 QPTAIAFDPIQKLLAIGTKTGSLRLLGRPGVD--AHVR---HETDAAVIQMQFLTN---EGALITATA-D-----DSLHL 74 (591)
Q Consensus 9 ~v~~~~~spdg~~la~g~~dg~i~lw~~~~~~--~~~~---~~h~~~v~~l~~sp~---~~~l~s~~~-d-----~~i~v 74 (591)
....++|.|||++++ +..+|.|++++ .+.. +..+ .........|+|+|+ +..|+.+.. + +.|..
T Consensus 32 ~P~~ia~~pdG~l~V-~e~~g~I~~i~-~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r 109 (352)
T 2ism_A 32 VPWALAFLPDGGMLI-AERPGRIRLFR-EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVR 109 (352)
T ss_dssp CEEEEEECTTSCEEE-EETTTEEEEEE-TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEE
T ss_pred CceEEEEcCCCeEEE-EeCCCeEEEEE-CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEEE
Confidence 457899999998555 45679999998 4321 1111 122457889999998 555554433 2 56777
Q ss_pred EeecccCc---e-eeeEEEe---eccceEEEEeeCCceEEEEEeCC-------------CcEEEEEeeeeeeeceecccc
Q psy710 75 WNFRQKRP---E-IVHSLKF---QRERITYIHLPLQSKWLYVGTEK-------------GNIHVVNIESFTLSGYIINWN 134 (591)
Q Consensus 75 w~~~~~~~---~-~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~d-------------~~i~vwd~~~~~~~~~~~~~~ 134 (591)
++...+.. + .+..+.. .......++|.|||.+.++.+.. +.|.-++... + +.
T Consensus 110 ~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG-~----~p--- 181 (352)
T 2ism_A 110 LRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEG-E----PA--- 181 (352)
T ss_dssp EEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTS-S----BC---
T ss_pred EEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCC-C----CC---
Confidence 77764321 1 1111221 11224578999999665554332 2222222111 0 00
Q ss_pred cccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECC-CCCEEEEEeCCCc--------EEEeCCCC-------
Q psy710 135 KAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDP-IQKLLAIGTKTGS--------LRLLGRPG------- 198 (591)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~--------i~i~d~~~------- 198 (591)
.+.. +..........+..++. .+..++|+| +++++++-..... |.+.....
T Consensus 182 --------~~np----f~~~~~~~~~i~a~G~r-np~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~ 248 (352)
T 2ism_A 182 --------PGNP----FLGRRGARPEVYSLGHR-NPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRV 248 (352)
T ss_dssp --------TTCT----TTTCTTSCTTEEEECCS-EECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBCCTTTC
T ss_pred --------CCCc----ccCCCCCCccEEEEcCC-CcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcc
Confidence 0000 00000011122223332 357889999 6665554433332 43322111
Q ss_pred ---------eEEEEeccCCCcEEEEEEEcCCceEEEEeCCCcEEEEEccCCCcc----eEEeeeeccccEEEEEecCCCC
Q psy710 199 ---------VDAHVRHETDAAVIQMQFLTNEGALITATADDSLHLWNFRQKRPE----IVHSLKFQRERITYIHLPLQSK 265 (591)
Q Consensus 199 ---------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~----~~~~~~~~~~~v~~~~~sp~~~ 265 (591)
...............++| .+|..+++.-..+.|...++...... ....+-.....+..+++.|||.
T Consensus 249 ~g~~~~~~~~~p~~~~~~~~ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~ 327 (352)
T 2ism_A 249 VGRGNDPRYRDPLYFWPQGFPPGNLAF-FRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETALSGFGRLREVQVGPDGA 327 (352)
T ss_dssp CSCCCCTTSCCCSEECTTCCCEEEEEE-ETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEESSCCEEEEEECTTSC
T ss_pred cCCCCCCCCcCCeEecCCCCCCcceEE-ECCEEEEEECCCCEEEEEEECCCCcceeecchheecccCCCeeEEEECCCCc
Confidence 000111111234567777 46776666666677887777644211 0122212236788999999997
Q ss_pred EEEEEe
Q psy710 266 WLYVGT 271 (591)
Q Consensus 266 ~l~~~~ 271 (591)
+.++..
T Consensus 328 lyv~~~ 333 (352)
T 2ism_A 328 LYVTTS 333 (352)
T ss_dssp EEEEEC
T ss_pred EEEEEe
Confidence 666543
No 298
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.07 E-value=0.0035 Score=65.97 Aligned_cols=202 Identities=5% Similarity=-0.094 Sum_probs=124.4
Q ss_pred CCceEEEECCCCCEE-EEEeCCCcEEEeCCCCeE-----EEEeccCCCcEEEEEEEcCCceEEEE-eCCCcEEEEEccCC
Q psy710 168 YQPTAIAFDPIQKLL-AIGTKTGSLRLLGRPGVD-----AHVRHETDAAVIQMQFLTNEGALITA-TADDSLHLWNFRQK 240 (591)
Q Consensus 168 ~~v~~~~~~~~~~~l-~~~~~dg~i~i~d~~~~~-----~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~~wd~~~~ 240 (591)
..+..++|++....| ++-...+.|+.+++.+.. .............|++.+.++.|+.+ ...+.|.+.++...
T Consensus 424 ~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~ 503 (791)
T 3m0c_C 424 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV 503 (791)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSS
T ss_pred CceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCCC
Confidence 446789999855444 455556788888876531 12222233467789999877656555 55688999999865
Q ss_pred CcceEEeeeeccccEEEEEecCCCCEEEEEeC-C-ccEEEEEccCccccceeeehhhhccccccCCCCCeEEEecCCCCC
Q psy710 241 RPEIVHSLKFQRERITYIHLPLQSKWLYVGTE-K-GNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDP 318 (591)
Q Consensus 241 ~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~-d-g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~ 318 (591)
.....+.........|+++|.+.+|+.... + +.|...++...... ............|++.+ ..
T Consensus 504 --~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~-----------~lv~~~l~~P~GLavD~-~~ 569 (791)
T 3m0c_C 504 --KRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY-----------SLVTENIQWPNGITLDL-LS 569 (791)
T ss_dssp --SEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEE-----------EEECSSCSCEEEEEEET-TT
T ss_pred --eEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceE-----------EEEeCCCCCceEEEEec-CC
Confidence 222223333356889999998777766653 2 67888888754331 12223335688999998 66
Q ss_pred CeEEEEE-cCCEEEEEecccceEEEEecc---CCCeeEEEEeecCCEEEEEe-cCCcEEEEecCCCCCceeee
Q psy710 319 SKLLLAY-ETGLVVHWDLKLKRAEFRWQC---SEPIKSVCWHYEGKQFLCSH-TDGTISTWAVRPLAKPVSVN 386 (591)
Q Consensus 319 ~~l~~~~-~dg~i~iwd~~~~~~~~~~~~---~~~v~~~~~sp~g~~l~s~~-~dg~i~vwd~~~~~~~~~~~ 386 (591)
..|+.+. ....|...++........... -.....|++ ++..|..+. ..+.|...+.. +++.+..+
T Consensus 570 ~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav--~~~~lYwtD~~~~~I~~~dk~-tG~~~~~l 639 (791)
T 3m0c_C 570 GRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAV--FEDKVFWTDIINEAIFSANRL-TGSDVNLL 639 (791)
T ss_dssp TEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEE--ETTEEEEEETTTTEEEEEETT-TCCCCEEE
T ss_pred CeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEE--eCCEEEEEECCCCEEEEEeCC-CCcceEEe
Confidence 6666664 467899999987655554432 223456665 444555544 55677777766 45544444
No 299
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.05 E-value=0.0011 Score=65.07 Aligned_cols=247 Identities=9% Similarity=0.034 Sum_probs=137.3
Q ss_pred eEEEEeeC-CceEEEEEeC-CCcEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceE
Q psy710 95 ITYIHLPL-QSKWLYVGTE-KGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTA 172 (591)
Q Consensus 95 v~~~~~~~-~~~~l~~~~~-d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 172 (591)
...|+|.| +...|+++.. .+.|++.|+.++.+........ .....+..
T Consensus 141 p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~------------------------------~~~~~p~~ 190 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINT------------------------------IPTNRIRS 190 (496)
T ss_dssp EEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTT------------------------------SSCSBEEE
T ss_pred CCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCc------------------------------cccCCCcE
Confidence 56889998 3555555544 4678888887766544332100 01234689
Q ss_pred EEE-------CCCCCEEEEEeCCC-------cEEEeCCCC-e--------EEEEeccCCCcEEEEEEEcCCceEE-EEeC
Q psy710 173 IAF-------DPIQKLLAIGTKTG-------SLRLLGRPG-V--------DAHVRHETDAAVIQMQFLTNEGALI-TATA 228 (591)
Q Consensus 173 ~~~-------~~~~~~l~~~~~dg-------~i~i~d~~~-~--------~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~ 228 (591)
++| +++++.|+++...+ .|.+++... + ...... .....++++|++..|+ +-..
T Consensus 191 ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~---~~p~giavdp~~g~LYvtd~~ 267 (496)
T 3kya_A 191 IAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIAAY---KQCNGATIHPINGELYFNSYE 267 (496)
T ss_dssp EEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEEE---SCCCCEEECTTTCCEEEEETT
T ss_pred EEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCCCCceeecccceeeccC---CCceEEEEcCCCCeEEEEECC
Confidence 999 99998677666554 255664332 1 112111 2445778899655554 5556
Q ss_pred CCcEEEEEcc-------CCCc------c------eEEeeeeccccEEEEEecCCCCEEEEEe-CCccEEEEEccC--ccc
Q psy710 229 DDSLHLWNFR-------QKRP------E------IVHSLKFQRERITYIHLPLQSKWLYVGT-EKGNIHVVNIES--FTL 286 (591)
Q Consensus 229 d~~i~~wd~~-------~~~~------~------~~~~~~~~~~~v~~~~~sp~~~~l~~~~-~dg~i~i~d~~~--~~~ 286 (591)
++.|..+|+. ++.. . .+.... .......++|+|+|++|+++. ....|+.++... +.+
T Consensus 268 ~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~-~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~ 346 (496)
T 3kya_A 268 KGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIA-DPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEF 346 (496)
T ss_dssp TTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECS-SSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEE
T ss_pred CCEEEEEecccccccccCceeecccccccccccceeEecC-CCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCccee
Confidence 7789999997 4432 0 122221 224467899999999665554 566888866543 221
Q ss_pred cc-eee--ehhhhccc---cccCCCCCeE-EEecC-------CCCCCeEEEEEcCCEEEEEecccceEEEEecc------
Q psy710 287 SG-YII--NWNKAIDV---CMKTHPGPII-HLSDN-------PLDPSKLLLAYETGLVVHWDLKLKRAEFRWQC------ 346 (591)
Q Consensus 287 ~~-~~~--~~~~~~~~---~~~~~~~~v~-~~~~s-------p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~------ 346 (591)
.. ..+ .+...-.. .....-.... .++.. + +++++++=.....|+.++ .++.+......
T Consensus 347 ~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~-~g~lyVaD~~N~rIr~i~-~~G~v~TiaG~g~~~~~ 424 (496)
T 3kya_A 347 ITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVFVKNPDYTGEE-EYDFYFVDRLNFCVRKVT-PEGIVSTYAGRGASTSL 424 (496)
T ss_dssp CCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEEECTTCCSSC-CEEEEEEEGGGTEEEEEC-TTCBEEEEEESCTTHHH
T ss_pred cccEEecCCCCCCcccCCcccccccCCCeEEEEEccccccccC-CCeEEEEECCCCEEEEEe-CCCCEEEEecccccccc
Confidence 10 000 00000000 0000111234 44443 3 556666656678999998 45555444321
Q ss_pred ------------------CCCeeEEEEeec-CCEEEEEecCCcEEEEecC
Q psy710 347 ------------------SEPIKSVCWHYE-GKQFLCSHTDGTISTWAVR 377 (591)
Q Consensus 347 ------------------~~~v~~~~~sp~-g~~l~s~~~dg~i~vwd~~ 377 (591)
-.....++++++ |.+.++=.....|+.+++.
T Consensus 425 ~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~lyVaD~~N~rIrki~~~ 474 (496)
T 3kya_A 425 ADGNQWGTDDGDLREVARFRDVSGLVYDDVKEMFYVHDQVGHTIRTISME 474 (496)
T ss_dssp HHSCSCCCCCEETTTTCCCSSEEEEEEETTTTEEEEEETTTTEEEEEEEC
T ss_pred cCccccccCCCCchhhhhcCCCcEEEEECCCCEEEEEeCCCCEEEEEECC
Confidence 023567888886 6555555566778888887
No 300
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.99 E-value=0.0018 Score=61.54 Aligned_cols=239 Identities=10% Similarity=0.050 Sum_probs=121.1
Q ss_pred CcceEEEEEeecCCEEEEecCCCeEEEEeecccCceeeeEEE---eeccceEEEEeeCC---ceEEEEEeC-C-----Cc
Q psy710 48 DAAVIQMQFLTNEGALITATADDSLHLWNFRQKRPEIVHSLK---FQRERITYIHLPLQ---SKWLYVGTE-K-----GN 115 (591)
Q Consensus 48 ~~~v~~l~~sp~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~---~~~~~v~~~~~~~~---~~~l~~~~~-d-----~~ 115 (591)
-..-..++|.|+|+++++ ..++.|.+++ .++...+..+. ........++|+|+ +..|+++.. . +.
T Consensus 30 l~~P~~ia~~pdG~l~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~ 106 (352)
T 2ism_A 30 LEVPWALAFLPDGGMLIA-ERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQ 106 (352)
T ss_dssp CSCEEEEEECTTSCEEEE-ETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEE
T ss_pred CCCceEEEEcCCCeEEEE-eCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccE
Confidence 345679999999985555 4569998888 33222222221 12346789999998 555555443 2 56
Q ss_pred EEEEEeeeeeee---ceecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCCCCEEEEEeC-----
Q psy710 116 IHVVNIESFTLS---GYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTK----- 187 (591)
Q Consensus 116 i~vwd~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----- 187 (591)
|..++...+... ..+.... . ..+.......++|.|+|.+.++.+.
T Consensus 107 v~r~~~~~~~~~~~~~l~~~~p------------------~---------~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~ 159 (352)
T 2ism_A 107 VVRLRHLGERGVLDRVVLDGIP------------------A---------RPHGLHSGGRIAFGPDGMLYVTTGEVYERE 159 (352)
T ss_dssp EEEEEECSSCEEEEEEEEEEEC------------------C---------CTTCCCCCCCEEECTTSCEEEECCCTTCGG
T ss_pred EEEEEeCCCCcCceEEEEEeCC------------------C---------CCCCCcCCceEEECCCCCEEEEECCCCCCc
Confidence 777776542110 0000000 0 0011122468999999976655332
Q ss_pred --------CCcEEEeCCCCe-------------E-EEEeccCCCcEEEEEEEc-CCceEEEEeCCCcE------EEEEcc
Q psy710 188 --------TGSLRLLGRPGV-------------D-AHVRHETDAAVIQMQFLT-NEGALITATADDSL------HLWNFR 238 (591)
Q Consensus 188 --------dg~i~i~d~~~~-------------~-~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i------~~wd~~ 238 (591)
.|.|..++..+. . ...... -.....++|+| ++..+++-...+.+ .+.-+.
T Consensus 160 ~~~d~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G-~rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~ 238 (352)
T 2ism_A 160 LAQDLASLGGKILRLTPEGEPAPGNPFLGRRGARPEVYSLG-HRNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIV 238 (352)
T ss_dssp GGGCTTCSSSEEEEECTTSSBCTTCTTTTCTTSCTTEEEEC-CSEECCCEECTTTCCEEEEEECC------CCCEEEEEC
T ss_pred cccCCCCCceEEEEEcCCCCCCCCCcccCCCCCCccEEEEc-CCCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEec
Confidence 256666665541 0 011111 12466788999 55544433322221 222222
Q ss_pred CCC----------------cceEEeeeeccccEEEEEecCCCCEEEEEeCCccEEEEEccCccccceeeehhhhcccccc
Q psy710 239 QKR----------------PEIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMK 302 (591)
Q Consensus 239 ~~~----------------~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~ 302 (591)
.+. ..++..+..+ .....++| .+|.+++..-..+.|...++...... +... . ....+
T Consensus 239 ~G~nyGwp~~~g~~~~~~~~~p~~~~~~~-~ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~-~~~~--~-~~~~~- 311 (352)
T 2ism_A 239 PGGNYGWPRVVGRGNDPRYRDPLYFWPQG-FPPGNLAF-FRGDLYVAGLRGQALLRLVLEGERGR-WRVL--R-VETAL- 311 (352)
T ss_dssp TTCBCCTTTCCSCCCCTTSCCCSEECTTC-CCEEEEEE-ETTEEEEEETTTTEEEEEEEEEETTE-EEEE--E-EEEEE-
T ss_pred cCCcCCCCcccCCCCCCCCcCCeEecCCC-CCCcceEE-ECCEEEEEECCCCEEEEEEECCCCcc-eeec--c-hheec-
Confidence 221 0122222222 34566777 46666665556667887777654310 0000 0 00011
Q ss_pred CCCCCeEEEecCCCCCCeEEEEE
Q psy710 303 THPGPIIHLSDNPLDPSKLLLAY 325 (591)
Q Consensus 303 ~~~~~v~~~~~sp~~~~~l~~~~ 325 (591)
.....+..+++.| |+.+.++..
T Consensus 312 ~~~~rp~~v~~~p-dG~lyv~~~ 333 (352)
T 2ism_A 312 SGFGRLREVQVGP-DGALYVTTS 333 (352)
T ss_dssp ESSCCEEEEEECT-TSCEEEEEC
T ss_pred ccCCCeeEEEECC-CCcEEEEEe
Confidence 2235789999999 987666653
No 301
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.93 E-value=3.4e-05 Score=80.60 Aligned_cols=225 Identities=9% Similarity=0.008 Sum_probs=126.6
Q ss_pred CCcEEEEcCCCceeEeeccCCcceEEEEEeecCCEEEEec-CCCeEEEEeecccC--ceeeeEEEeeccceEEEEeeCCc
Q psy710 28 TGSLRLLGRPGVDAHVRHETDAAVIQMQFLTNEGALITAT-ADDSLHLWNFRQKR--PEIVHSLKFQRERITYIHLPLQS 104 (591)
Q Consensus 28 dg~i~lw~~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~~-~d~~i~vw~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~ 104 (591)
.+.|+..++.+.....+......+..++|.+.+..|+.+. ..+.|+.+++.... ......+.........+++.+.+
T Consensus 385 ~~~I~~id~~~~~~~~~~~~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~ 464 (699)
T 1n7d_A 385 RHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIH 464 (699)
T ss_dssp TTC-CEECTTSCCEECCSCCCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSS
T ss_pred ccceEEEeCCCCcceeeeccCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeC
Confidence 3568888887655544433345667899999877777654 45788888887510 01111111111234567887555
Q ss_pred eEEEEE-eCCCcEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCCCCEEE
Q psy710 105 KWLYVG-TEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLA 183 (591)
Q Consensus 105 ~~l~~~-~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 183 (591)
..|+.+ ...+.|.++++........+. .....+..++++|.+..|+
T Consensus 465 g~LY~tD~~~~~I~v~d~dg~~~~~l~~---------------------------------~~~~~P~giavDp~~g~ly 511 (699)
T 1n7d_A 465 SNIYWTDSVLGTVSVADTKGVKRKTLFR---------------------------------EQGSKPRAIVVDPVHGFMY 511 (699)
T ss_dssp SBCEECCTTTSCEEEEBSSSCCEEEECC---------------------------------CSSCCCCCEECCSSSSCCE
T ss_pred CcEEEEeccCCeEEEEecCCCceEEEEe---------------------------------CCCCCcceEEEccCCCcEE
Confidence 444444 446788888876532211111 1113357889998765555
Q ss_pred EEeC--CCcEEEeCCCCeEEEEec-cCCCcEEEEEEEcCCceEEEE-eCCCcEEEEEccCCCcceEEeeeeccccEEEEE
Q psy710 184 IGTK--TGSLRLLGRPGVDAHVRH-ETDAAVIQMQFLTNEGALITA-TADDSLHLWNFRQKRPEIVHSLKFQRERITYIH 259 (591)
Q Consensus 184 ~~~~--dg~i~i~d~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~-~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~ 259 (591)
.... .+.|..+++.+....... ........|+|+|+++.|+.+ ...+.|..+++.....+.+............++
T Consensus 512 ~td~~~~~~I~~~~~dG~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~gla 591 (699)
T 1n7d_A 512 WTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLA 591 (699)
T ss_dssp ECCCSSSCCEEBCCSSSCCCCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCE
T ss_pred EcccCCCCeEEEEeCCCCCeeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeE
Confidence 5443 267888887654332221 223356789999987766665 455789999987542222221111112234455
Q ss_pred ecCCCCEEEEEeCCccEEEEEccCccc
Q psy710 260 LPLQSKWLYVGTEKGNIHVVNIESFTL 286 (591)
Q Consensus 260 ~sp~~~~l~~~~~dg~i~i~d~~~~~~ 286 (591)
+..+ .++++....+.|..++..+++.
T Consensus 592 vd~~-~lywtd~~~~~V~~~d~~~G~~ 617 (699)
T 1n7d_A 592 VFED-KVFWTDIINEAIFSANRLTGSD 617 (699)
T ss_dssp EETT-EEEEECSTTTCEEEEETTTEEE
T ss_pred EECC-EEEEEeCCCCeEEEEEccCCCc
Confidence 5443 4444555667899999877655
No 302
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.92 E-value=0.0061 Score=57.77 Aligned_cols=235 Identities=11% Similarity=0.066 Sum_probs=122.3
Q ss_pred CcceEEEEEeecCCEEEEecCCCeEEEEeecccCceeeeEEE---eeccceEEEEeeCC---ceEEEEEeC----C----
Q psy710 48 DAAVIQMQFLTNEGALITATADDSLHLWNFRQKRPEIVHSLK---FQRERITYIHLPLQ---SKWLYVGTE----K---- 113 (591)
Q Consensus 48 ~~~v~~l~~sp~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~---~~~~~v~~~~~~~~---~~~l~~~~~----d---- 113 (591)
-.....++|.|+|+++++ ..++.|++++ .+++ +.+..+. ........|+++|+ +..|+++.. +
T Consensus 28 l~~P~~ia~~pdG~l~V~-e~~g~I~~~d-~~G~-~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~ 104 (354)
T 3a9g_A 28 LEVPWSIAPLGGGRYLVT-ERPGRLVLIS-PSGK-KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIR 104 (354)
T ss_dssp CSCEEEEEEEETTEEEEE-ETTTEEEEEC-SSCE-EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEE
T ss_pred CCCCeEEEEcCCCeEEEE-eCCCEEEEEe-CCCc-eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcc
Confidence 356789999999985555 4569998887 3332 2232221 12345788999997 445544432 2
Q ss_pred CcEEEEEeeee--eeeceecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCCCCEEEEEeC----
Q psy710 114 GNIHVVNIESF--TLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTK---- 187 (591)
Q Consensus 114 ~~i~vwd~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---- 187 (591)
..|..|+.... ..... . .....+..+.......++|.|||.+.++.+.
T Consensus 105 ~~v~r~~~~~~~~~~~~~-~-------------------------~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~ 158 (354)
T 3a9g_A 105 NRVIRGRLDGSTFKLKEV-K-------------------------TLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADP 158 (354)
T ss_dssp EEEEEEEECSSSCCEEEE-E-------------------------EEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCG
T ss_pred eEEEEEEECCCCcCcCcc-E-------------------------EEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCC
Confidence 45666665432 10000 0 0000000011122467999999986665432
Q ss_pred ---------CCcEEEeCCCCe----------EEEEeccCCCcEEEEEEEc-CCceEEEEeCCC---cEEEEEccCCC---
Q psy710 188 ---------TGSLRLLGRPGV----------DAHVRHETDAAVIQMQFLT-NEGALITATADD---SLHLWNFRQKR--- 241 (591)
Q Consensus 188 ---------dg~i~i~d~~~~----------~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~---~i~~wd~~~~~--- 241 (591)
.|.|..++.... +.. ... -.....++|+| +++.+++-...+ .|.+. ..+.
T Consensus 159 ~~~~d~~~~~G~I~ri~~dG~~p~~npf~~~~i~-a~G-~rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i--~~G~nyG 234 (354)
T 3a9g_A 159 RLAQDLSSLAGKILRVDEEGRPPADNPFPNSPIW-SYG-HRNPQGIDWHRASGVMVATEHGPVGHDEVNII--LKGGNYG 234 (354)
T ss_dssp GGGTCTTCCSSEEEEECTTSCCCTTSSSTTCCEE-EEC-CSCCCEEEECTTTCCEEEEECCSSSCCEEEEE--CTTCBCC
T ss_pred ccccCCCCCCeEEEEEcCCCCCCCCCCCCCCcEE-EEc-cCCcceEEEeCCCCCEEEEecCCCCCcEEEEe--cCCCcCC
Confidence 245666665442 111 111 12456799999 555444332221 13332 2111
Q ss_pred -------------cceEEee-eeccccEEEEEec-------CCCCEEEEEeCCccEEEEEccCcc-ccceeeehhhhccc
Q psy710 242 -------------PEIVHSL-KFQRERITYIHLP-------LQSKWLYVGTEKGNIHVVNIESFT-LSGYIINWNKAIDV 299 (591)
Q Consensus 242 -------------~~~~~~~-~~~~~~v~~~~~s-------p~~~~l~~~~~dg~i~i~d~~~~~-~~~~~~~~~~~~~~ 299 (591)
..++..+ ..+ .....++|. .+|.+++..-..+.|...++.... .... ..
T Consensus 235 wp~~~g~~~~~~~~~p~~~~~~~~-~ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~--------~~ 305 (354)
T 3a9g_A 235 WPLATGKAGRGEFVDPVIDTGSET-WAPSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKI--------ST 305 (354)
T ss_dssp TTTCCSCCCCTTSCCCSEECTTCC-CCEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEE--------EE
T ss_pred CCcccCCCCCCCCcCCEeecCCCC-cCCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccce--------ee
Confidence 0122222 122 456777773 467766666666788888887532 2100 01
Q ss_pred cccCCCCCeEEEecCCCCCCeEEEEE
Q psy710 300 CMKTHPGPIIHLSDNPLDPSKLLLAY 325 (591)
Q Consensus 300 ~~~~~~~~v~~~~~sp~~~~~l~~~~ 325 (591)
.+.+....+..+++.| |+.+.++..
T Consensus 306 ~~~~~~~rp~~v~~~p-DG~lyv~~~ 330 (354)
T 3a9g_A 306 FFKNVFGRLRDVVIDD-DGGILISTS 330 (354)
T ss_dssp ECTTTSCCEEEEEECT-TSCEEEEEC
T ss_pred eccCCCCCeeEEEECC-CCcEEEEEe
Confidence 1222345789999999 887666553
No 303
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.92 E-value=0.0067 Score=57.50 Aligned_cols=236 Identities=14% Similarity=0.128 Sum_probs=122.8
Q ss_pred CCcEEEeCCCCcEEEEEeCCCcEEEEcCCCc-eeEee---ccCCcceEEEEEeec---CCEEEEecC----C----CeEE
Q psy710 9 QPTAIAFDPIQKLLAIGTKTGSLRLLGRPGV-DAHVR---HETDAAVIQMQFLTN---EGALITATA----D----DSLH 73 (591)
Q Consensus 9 ~v~~~~~spdg~~la~g~~dg~i~lw~~~~~-~~~~~---~~h~~~v~~l~~sp~---~~~l~s~~~----d----~~i~ 73 (591)
....++|.|||++++ +..+|.|++++..+. .+..+ .........|+|+|+ +..|+.+.. + ..|.
T Consensus 30 ~P~~ia~~pdG~l~V-~e~~g~I~~~d~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~ 108 (354)
T 3a9g_A 30 VPWSIAPLGGGRYLV-TERPGRLVLISPSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVI 108 (354)
T ss_dssp CEEEEEEEETTEEEE-EETTTEEEEECSSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEE
T ss_pred CCeEEEEcCCCeEEE-EeCCCEEEEEeCCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEE
Confidence 457899999998555 556799999985554 11111 122356889999998 555554432 3 5677
Q ss_pred EEeeccc--Cc---eee-eEEEee-ccceEEEEeeCCceEEEEEeCCC-------------cEEEEEeeeeeeeceeccc
Q psy710 74 LWNFRQK--RP---EIV-HSLKFQ-RERITYIHLPLQSKWLYVGTEKG-------------NIHVVNIESFTLSGYIINW 133 (591)
Q Consensus 74 vw~~~~~--~~---~~~-~~~~~~-~~~v~~~~~~~~~~~l~~~~~d~-------------~i~vwd~~~~~~~~~~~~~ 133 (591)
.|+.... .. +.+ ..+... ......++|.|||.+.++.+..+ .|.-++..
T Consensus 109 r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~d----------- 177 (354)
T 3a9g_A 109 RGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEE----------- 177 (354)
T ss_dssp EEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTT-----------
T ss_pred EEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCC-----------
Confidence 7776543 11 111 112211 12245689999997666543322 12211111
Q ss_pred ccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECC-CCCEEEEEeCCC---cEEEeCCCC--------e--
Q psy710 134 NKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDP-IQKLLAIGTKTG---SLRLLGRPG--------V-- 199 (591)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg---~i~i~d~~~--------~-- 199 (591)
+.. -..+.+.....+..++. .+..++|+| +++++++-.... .|.+..... .
T Consensus 178 -----------G~~---p~~npf~~~~i~a~G~r-np~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~ 242 (354)
T 3a9g_A 178 -----------GRP---PADNPFPNSPIWSYGHR-NPQGIDWHRASGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKA 242 (354)
T ss_dssp -----------SCC---CTTSSSTTCCEEEECCS-CCCEEEECTTTCCEEEEECCSSSCCEEEEECTTCBCCTTTCCSCC
T ss_pred -----------CCC---CCCCCCCCCcEEEEccC-CcceEEEeCCCCCEEEEecCCCCCcEEEEecCCCcCCCCcccCCC
Confidence 100 00001111222333443 357899999 666555433221 243322110 0
Q ss_pred ------EEEEec-cCCCcEEEEEEE-------cCCceEEEEeCCCcEEEEEccCC-CcceEEee-eeccccEEEEEecCC
Q psy710 200 ------DAHVRH-ETDAAVIQMQFL-------TNEGALITATADDSLHLWNFRQK-RPEIVHSL-KFQRERITYIHLPLQ 263 (591)
Q Consensus 200 ------~~~~~~-~~~~~v~~~~~~-------~~~~~l~~~~~d~~i~~wd~~~~-~~~~~~~~-~~~~~~v~~~~~sp~ 263 (591)
...... ........++|. .+|.++++.-..+.|...++... .......+ ......+..+++.||
T Consensus 243 ~~~~~~~p~~~~~~~~~ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pD 322 (354)
T 3a9g_A 243 GRGEFVDPVIDTGSETWAPSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDD 322 (354)
T ss_dssp CCTTSCCCSEECTTCCCCEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTT
T ss_pred CCCCCcCCEeecCCCCcCCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCC
Confidence 011111 123467788883 46766776666678888888753 11111222 222357889999999
Q ss_pred CCEEEEEe
Q psy710 264 SKWLYVGT 271 (591)
Q Consensus 264 ~~~l~~~~ 271 (591)
|.+.++..
T Consensus 323 G~lyv~~~ 330 (354)
T 3a9g_A 323 GGILISTS 330 (354)
T ss_dssp SCEEEEEC
T ss_pred CcEEEEEe
Confidence 97655543
No 304
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.89 E-value=0.0025 Score=58.40 Aligned_cols=202 Identities=9% Similarity=0.046 Sum_probs=125.7
Q ss_pred CceEEEECCCCCEEEEEe-CCCcEEEeCCCCeEEEE-eccC-------CCcEEEEEE---EcCCceEEEEe---------
Q psy710 169 QPTAIAFDPIQKLLAIGT-KTGSLRLLGRPGVDAHV-RHET-------DAAVIQMQF---LTNEGALITAT--------- 227 (591)
Q Consensus 169 ~v~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~-~~~~-------~~~v~~~~~---~~~~~~l~~~~--------- 227 (591)
-..+++|++....+..++ ..+.|..|+...+.... .... ...+..+.| .|+++++++..
T Consensus 14 yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g 93 (334)
T 2p9w_A 14 TPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFAD 93 (334)
T ss_dssp CCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTS
T ss_pred CCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccc
Confidence 357899988666666666 68999999998543322 2221 124688999 68877777544
Q ss_pred ----CCCcEEEEEcc---CCCcceEEeeeecc-----------ccEEEEEecCCCCEEEEEeCC-ccEEEEEccCccccc
Q psy710 228 ----ADDSLHLWNFR---QKRPEIVHSLKFQR-----------ERITYIHLPLQSKWLYVGTEK-GNIHVVNIESFTLSG 288 (591)
Q Consensus 228 ----~d~~i~~wd~~---~~~~~~~~~~~~~~-----------~~v~~~~~sp~~~~l~~~~~d-g~i~i~d~~~~~~~~ 288 (591)
.+..+..||+. +++......+.... .....++..++|+..++++.. +.|..++........
T Consensus 94 ~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~~~~~ 173 (334)
T 2p9w_A 94 QSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGKTVST 173 (334)
T ss_dssp CCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSCCEEE
T ss_pred cccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCCEEee
Confidence 25779999998 66433333333211 248899999999988888887 777777766543321
Q ss_pred eeeehhhhccccccCCCCCeEEEecCCCCCCeEEEEEcCCEEEEEecccceE--EEEe--cc---CCCeeEE-EEeecCC
Q psy710 289 YIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKLLLAYETGLVVHWDLKLKRA--EFRW--QC---SEPIKSV-CWHYEGK 360 (591)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~iwd~~~~~~--~~~~--~~---~~~v~~~-~~sp~g~ 360 (591)
.... ..........+.|+++| +++.|++....+.+..+|+..... +..- .. -.....+ .--.+|+
T Consensus 174 ~~~~------~~~~~~~~G~nGIv~~p-dg~~Liv~~~~g~L~~fD~~~pv~~~v~~~~~G~~~~~~~~dgilp~~~~G~ 246 (334)
T 2p9w_A 174 FAWE------SGNGGQRPGYSGITFDP-HSNKLIAFGGPRALTAFDVSKPYAWPEPVKINGDFGTLSGTEKIVTVPVGNE 246 (334)
T ss_dssp EEEC------CCCSSSCCSCSEEEEET-TTTEEEEESSSSSEEEEECSSSSCCCEECEESSCCCCCTTEEEEEEEEETTE
T ss_pred eeec------CCCcccccCcceEEEeC-CCCEEEEEcCCCeEEEEcCCCCcceeecccccCCcccccCcccccccccCCE
Confidence 1100 01111223467899999 999988887799999999885433 2211 11 1223332 3345777
Q ss_pred E-EEEEecCCcEEEEecC
Q psy710 361 Q-FLCSHTDGTISTWAVR 377 (591)
Q Consensus 361 ~-l~s~~~dg~i~vwd~~ 377 (591)
. |++....+.+.+.+.+
T Consensus 247 vllV~~~~~~~~~l~S~D 264 (334)
T 2p9w_A 247 SVLVGARAPYAISFRSWD 264 (334)
T ss_dssp EEEEEEETTEEEEEECSS
T ss_pred EEEEEcCCCCEEEEECCC
Confidence 7 4455556655555554
No 305
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=97.89 E-value=0.014 Score=53.01 Aligned_cols=263 Identities=11% Similarity=0.125 Sum_probs=162.1
Q ss_pred CCCeEEEEeecccCceeeeEEEeeccceEEEEeeCCceEEEEEeCCCcEEEEEeeeeeeeceecccccccccCCCCCCCc
Q psy710 68 ADDSLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGP 147 (591)
Q Consensus 68 ~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (591)
.+.+|.|-|+..+.....+.+. .-+.-.+|..+.+|.-. ...+.++|+++.+.++...
T Consensus 47 ~~~~VvIiDl~n~~~~~Rrpi~-----AdsAIMnP~~~ViALra-g~~LQiFnletK~klks~~---------------- 104 (365)
T 2xzh_A 47 EQAQVVIIDMNDPSNPIRRPIS-----ADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHT---------------- 104 (365)
T ss_dssp TEEEEEEEETTSTTSCEEEECC-----CSEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEE----------------
T ss_pred CCCEEEEEECCCCCCccccccc-----cceeeeCCCccEEEEec-CCeEEEechHHhhhhccee----------------
Confidence 3457888898876521111121 12344688888777765 5789999999866544433
Q ss_pred eeccCCCCcCcceeeeccCCCCceEEEECCCCCEEEEEeCCCcEEEeCCCCe--E--EEEeccC--CCcEEEEEEEcCCc
Q psy710 148 IIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGV--D--AHVRHET--DAAVIQMQFLTNEG 221 (591)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~--~--~~~~~~~--~~~v~~~~~~~~~~ 221 (591)
.+..|.--.|-.+. .|+..+ +..|+-|++.+. . ....+.. ...|..-..+++.+
T Consensus 105 ------------------~~e~VvfWkWis~~-~L~lVT-~taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~k 164 (365)
T 2xzh_A 105 ------------------MTDDVTFWKWISLN-TVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQK 164 (365)
T ss_dssp ------------------CSSCEEEEEECSSS-EEEEEE-SSEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSC
T ss_pred ------------------cCCccEEEEecCCC-eEEEEc-CCcEEEEcccCCCCCceeeecchhcccceEEEEEECCCCC
Confidence 23445666665444 355444 456999987642 1 1122211 55777788888889
Q ss_pred eEEEEe-------CCCcEEEEEccCCCcceEEeeeeccccEEEEEecCC---CCEEEEEeC---CccEEEEEccCcc--c
Q psy710 222 ALITAT-------ADDSLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQ---SKWLYVGTE---KGNIHVVNIESFT--L 286 (591)
Q Consensus 222 ~l~~~~-------~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~sp~---~~~l~~~~~---dg~i~i~d~~~~~--~ 286 (591)
+++..+ -.|.+.+|..+.+ .-+.+++|......+.+.-+ ...++.+.. .+++++.++.... .
T Consensus 165 W~~l~GI~~~~~~v~G~mQLYS~er~---~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~ 241 (365)
T 2xzh_A 165 WLLLTGISAQQNRVVGAMQLYSVDRK---VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGN 241 (365)
T ss_dssp EEEEEEEEEETTEEEEEEEEEETTTT---EEEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTC
T ss_pred EEEEEeEeccCCccceeEEEEeeccc---ccceeeeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCC
Confidence 876542 2367889998865 66778888555544443221 224444433 2589999985431 1
Q ss_pred cceeeehhhhccccccCCCCCeEEEecCCCCCCeEEEEEcCCEEEEEecccceEEEEec-cCCCeeEEEEeecCCEEEEE
Q psy710 287 SGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKLLLAYETGLVVHWDLKLKRAEFRWQ-CSEPIKSVCWHYEGKQFLCS 365 (591)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp~g~~l~s~ 365 (591)
.++... ...+.........-..++..++ ....++.-..-|.|++||++++.++..-. ..+.|...+-+....=++..
T Consensus 242 ~~f~kk-~vdi~fppea~~DFPVamqvs~-kygviyviTK~G~ihlyDleTgt~i~~nrIS~d~iF~ta~~~~~~Gi~~V 319 (365)
T 2xzh_A 242 QPFPKK-AVDVFFPPEAQNDFPVAMQISE-KHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGV 319 (365)
T ss_dssp CCCCCE-EEEECCCTTCTTCCEEEEEEET-TTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEEGGGTEEEEE
T ss_pred CCcccc-cceeeCCccccCCceEEEEecc-cCCEEEEEeCCcEEEEEEcccCcEEEEeccCCCceEEecccCCCCcEEEE
Confidence 111000 0000111222345567888998 78889999999999999999999987766 56667666665555556666
Q ss_pred ecCCcEEEEecC
Q psy710 366 HTDGTISTWAVR 377 (591)
Q Consensus 366 ~~dg~i~vwd~~ 377 (591)
...|.|.--.++
T Consensus 320 nr~GqVl~v~v~ 331 (365)
T 2xzh_A 320 NRKGQVLSVCVE 331 (365)
T ss_dssp ETTCEEEEEEEC
T ss_pred cCCCEEEEEEEC
Confidence 688888777777
No 306
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.73 E-value=0.0017 Score=59.49 Aligned_cols=167 Identities=8% Similarity=0.056 Sum_probs=109.8
Q ss_pred CCcEEEEEEEcCCceEEEEe-CCCcEEEEEccCCCcceEEeeee-----c-cccEEEEEe---cCCCCEEEEEe------
Q psy710 208 DAAVIQMQFLTNEGALITAT-ADDSLHLWNFRQKRPEIVHSLKF-----Q-RERITYIHL---PLQSKWLYVGT------ 271 (591)
Q Consensus 208 ~~~v~~~~~~~~~~~l~~~~-~d~~i~~wd~~~~~~~~~~~~~~-----~-~~~v~~~~~---sp~~~~l~~~~------ 271 (591)
.....++.|.+....|+.++ ..++|..||...+....+ .+.. . ...+..+.+ .|+++++++..
T Consensus 12 ~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~-~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~ 90 (334)
T 2p9w_A 12 NLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNV-VIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFN 90 (334)
T ss_dssp TCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEE-CCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTC
T ss_pred ccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEE-ecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccccc
Confidence 33556788988666666665 789999999875522222 2321 0 124678999 68887777543
Q ss_pred -------CCccEEEEEcc---Cccccceeeehhhhccc--cccC-CCCCeEEEecCCCCCCeEEEEEcC-CEEEEEeccc
Q psy710 272 -------EKGNIHVVNIE---SFTLSGYIINWNKAIDV--CMKT-HPGPIIHLSDNPLDPSKLLLAYET-GLVVHWDLKL 337 (591)
Q Consensus 272 -------~dg~i~i~d~~---~~~~~~~~~~~~~~~~~--~~~~-~~~~v~~~~~sp~~~~~l~~~~~d-g~i~iwd~~~ 337 (591)
.+..+..||+. +++..-. ......... ...+ -......++..+ +|+..++++.. +.|...+...
T Consensus 91 ~~g~~~~g~~~v~~~Dl~~~~tg~~~~~-~dL~~~~~~~~~~~g~~~~~~nDvavD~-~GnaYVt~s~~~~~I~rV~pdG 168 (334)
T 2p9w_A 91 FADQSSHGASSFHSFNLPLSENSKPVWS-VNFEKVQDEFEKKAGKRPFGVVQSAQDR-DGNSYVAFALGMPAIARVSADG 168 (334)
T ss_dssp TTSCCSSSCCEEEEEESSCCTTCCCSEE-EESHHHHHHHHHHHSSCCEEEEEEEECT-TSCEEEEEEESSCEEEEECTTS
T ss_pred ccccccCCCCEEEEEcCCcCCCCCEEEE-ecCccccccccccccccccCCceeEECC-CCCEEEeCCCCCCeEEEEeCCC
Confidence 25679999998 6655311 111100000 0001 123588999999 99999998888 8888888776
Q ss_pred ceEEEEecc------CCCeeEEEEeecCCEEEEEecCCcEEEEecC
Q psy710 338 KRAEFRWQC------SEPIKSVCWHYEGKQFLCSHTDGTISTWAVR 377 (591)
Q Consensus 338 ~~~~~~~~~------~~~v~~~~~sp~g~~l~s~~~dg~i~vwd~~ 377 (591)
......+.. ....+.++++|+|+.|++...+|.+..+|+.
T Consensus 169 ~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~ 214 (334)
T 2p9w_A 169 KTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVS 214 (334)
T ss_dssp CCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECS
T ss_pred CEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCC
Confidence 644433221 1236799999999999998779999999988
No 307
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.70 E-value=0.0001 Score=77.01 Aligned_cols=203 Identities=7% Similarity=-0.082 Sum_probs=118.0
Q ss_pred CCceEEEECCCCCEEEEE-eCCCcEEEeCCCC----eEEEEec-cCCCcEEEEEEEcCCceEE-EEeCCCcEEEEEccCC
Q psy710 168 YQPTAIAFDPIQKLLAIG-TKTGSLRLLGRPG----VDAHVRH-ETDAAVIQMQFLTNEGALI-TATADDSLHLWNFRQK 240 (591)
Q Consensus 168 ~~v~~~~~~~~~~~l~~~-~~dg~i~i~d~~~----~~~~~~~-~~~~~v~~~~~~~~~~~l~-~~~~d~~i~~wd~~~~ 240 (591)
..+..++|++.+..|+.. ...+.|+.+++.+ ....... ........+++.+.+..|+ +-...+.|.++++...
T Consensus 406 ~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~ 485 (699)
T 1n7d_A 406 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV 485 (699)
T ss_dssp TTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSC
T ss_pred cceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCC
Confidence 345788999866655554 3467888888765 1111111 1112455678875554444 4455678999998765
Q ss_pred CcceEEeeeeccccEEEEEecCCCCEEEEEeC-C-ccEEEEEccCccccceeeehhhhccccccCCCCCeEEEecCCCCC
Q psy710 241 RPEIVHSLKFQRERITYIHLPLQSKWLYVGTE-K-GNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDP 318 (591)
Q Consensus 241 ~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~-d-g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~ 318 (591)
.....+.........++++|.+.+|+.+.. . +.|..+++...... ............|+|+| ++
T Consensus 486 --~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~-----------~l~~~~l~~PnGlavd~-~~ 551 (699)
T 1n7d_A 486 --KRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY-----------SLVTENIQWPNGITLDL-LS 551 (699)
T ss_dssp --CEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCC-----------EESCSSCSSCCCEEECT-TT
T ss_pred --ceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCee-----------EEEeCCCCCccEEEEec-cC
Confidence 222223222345678899997766665543 2 67877776543221 01112234567899999 76
Q ss_pred CeEEEEE-cCCEEEEEecccceEEEEecc---CCCeeEEEEeecCCEEEEEecCCcEEEEecCCCCCceeee
Q psy710 319 SKLLLAY-ETGLVVHWDLKLKRAEFRWQC---SEPIKSVCWHYEGKQFLCSHTDGTISTWAVRPLAKPVSVN 386 (591)
Q Consensus 319 ~~l~~~~-~dg~i~iwd~~~~~~~~~~~~---~~~v~~~~~sp~g~~l~s~~~dg~i~vwd~~~~~~~~~~~ 386 (591)
..|+.+. ..+.|..+++........+.. ......+++..+ .++++....+.|..++.. +++.+..+
T Consensus 552 ~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~~d~~-~G~~~~~i 621 (699)
T 1n7d_A 552 GRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSANRL-TGSDVNLL 621 (699)
T ss_dssp CCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEEEETT-TEEEEECC
T ss_pred CEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEECC-EEEEEeCCCCeEEEEEcc-CCCceEEe
Confidence 6665554 567899999976544444331 233455666433 344455566789888876 55555544
No 308
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.68 E-value=0.006 Score=56.48 Aligned_cols=232 Identities=11% Similarity=0.021 Sum_probs=120.7
Q ss_pred CCCcEEEEEe-CC-----CcEEEEcCCCceeEeeccCCc-ceEEEEEeecCCEEEEecCC-----CeEEEEeecccC---
Q psy710 17 PIQKLLAIGT-KT-----GSLRLLGRPGVDAHVRHETDA-AVIQMQFLTNEGALITATAD-----DSLHLWNFRQKR--- 81 (591)
Q Consensus 17 pdg~~la~g~-~d-----g~i~lw~~~~~~~~~~~~h~~-~v~~l~~sp~~~~l~s~~~d-----~~i~vw~~~~~~--- 81 (591)
-++.+++.|+ .+ ..+.+||........+..-.. .........+++.++.|+.+ ..+.+||..+.+
T Consensus 13 ~~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~ 92 (301)
T 2vpj_A 13 ANEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYVASVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGV 92 (301)
T ss_dssp CCEEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTCCTTCC
T ss_pred CCCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChhhccccEEEECCEEEEEcCCCCCccCceEEEEECCCCCCCe
Confidence 3567777777 33 368888877554443322111 11111223456777777754 468888888765
Q ss_pred ceeeeEEEeeccceEEEEeeCCceEEEEEeCC-----CcEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCCCc
Q psy710 82 PEIVHSLKFQRERITYIHLPLQSKWLYVGTEK-----GNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPL 156 (591)
Q Consensus 82 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (591)
...+..+.........+. .+++.++.|+.+ ..+.+||+.+.+....-...
T Consensus 93 W~~~~~~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p----------------------- 147 (301)
T 2vpj_A 93 WYSVAPMNVRRGLAGATT--LGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQ----------------------- 147 (301)
T ss_dssp CEEECCCSSCCBSCEEEE--ETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECS-----------------------
T ss_pred eEECCCCCCCccceeEEE--ECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCC-----------------------
Confidence 333333222212222222 267777777653 35777777665433221100
Q ss_pred CcceeeeccCCCCceEEEECCCCCEEEEEeCC-----CcEEEeCCCCeEEEEeccCCCc--EEEEEEEcCCceEEEEeCC
Q psy710 157 DPSKTFRHGFPYQPTAIAFDPIQKLLAIGTKT-----GSLRLLGRPGVDAHVRHETDAA--VIQMQFLTNEGALITATAD 229 (591)
Q Consensus 157 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~--v~~~~~~~~~~~l~~~~~d 229 (591)
..+.+ ..++.+ ++++++.|+.+ ..+..||..+.+.........+ -.++.. -+++.++.|+.+
T Consensus 148 ----~~r~~----~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~i~v~GG~~ 216 (301)
T 2vpj_A 148 ----TAREG----AGLVVA--SGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVAL-LNDHIYVVGGFD 216 (301)
T ss_dssp ----SCCBS----CEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCBC
T ss_pred ----CCccc----ceEEEE--CCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEE-ECCEEEEEeCCC
Confidence 00001 122222 56777777654 4588899888776654322111 112222 266777777654
Q ss_pred -----CcEEEEEccCCCcceEEeeeeccccEEEEEecCCCCEEEEEeCC-----ccEEEEEccCccc
Q psy710 230 -----DSLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEK-----GNIHVVNIESFTL 286 (591)
Q Consensus 230 -----~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d-----g~i~i~d~~~~~~ 286 (591)
..+.+||+.+.+...+..+.........+.+ ++++++.|+.+ ..+.+||+.+.+-
T Consensus 217 ~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 281 (301)
T 2vpj_A 217 GTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATVL--RGRLYAIAGYDGNSLLSSIECYDPIIDSW 281 (301)
T ss_dssp SSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBEEEEEEEETTTTEE
T ss_pred CCcccceEEEEeCCCCcEEECCCCCCcccceeEEEE--CCEEEEEcCcCCCcccccEEEEcCCCCeE
Confidence 4689999987733333222222122223333 66777777655 3577888776543
No 309
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=97.66 E-value=0.02 Score=54.26 Aligned_cols=69 Identities=12% Similarity=0.135 Sum_probs=40.9
Q ss_pred ccEEEEEecC-------CCCEEEEEeCCccEEEEEccCccccceeeehhhhccccccCCCCCeEEEecCCCCCCeEEEEE
Q psy710 253 ERITYIHLPL-------QSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKLLLAY 325 (591)
Q Consensus 253 ~~v~~~~~sp-------~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~ 325 (591)
..+..+.|.. +|++++..-..+.|...++..++.... ...+......+..+++.| |+.+.++..
T Consensus 271 ~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~--------~~~~~~~~~rp~~v~~~p-dG~lyv~td 341 (353)
T 2g8s_A 271 PAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTED--------GRILTDRGQRIRDVRTGP-DGYLYVLTD 341 (353)
T ss_dssp CCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEE--------EEESGGGCCCEEEEEECT-TSCEEEEEC
T ss_pred cCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeee--------EEcccCCCCceeEEEECC-CCcEEEEEe
Confidence 3566677753 466666666677888888775432210 001222345789999999 988655433
Q ss_pred -cCCEE
Q psy710 326 -ETGLV 330 (591)
Q Consensus 326 -~dg~i 330 (591)
.+|.|
T Consensus 342 ~~~g~I 347 (353)
T 2g8s_A 342 ESSGEL 347 (353)
T ss_dssp STTEEE
T ss_pred CCCCEE
Confidence 34433
No 310
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=97.64 E-value=0.013 Score=55.51 Aligned_cols=104 Identities=10% Similarity=0.037 Sum_probs=58.7
Q ss_pred CCcEEEeCCCCcEEEEEeCCCcEEEEcCCCceeEe---e----ccCCcceEEEEEeec---CCEEEEec-C-------CC
Q psy710 9 QPTAIAFDPIQKLLAIGTKTGSLRLLGRPGVDAHV---R----HETDAAVIQMQFLTN---EGALITAT-A-------DD 70 (591)
Q Consensus 9 ~v~~~~~spdg~~la~g~~dg~i~lw~~~~~~~~~---~----~~h~~~v~~l~~sp~---~~~l~s~~-~-------d~ 70 (591)
....|+|.|||+.|.++...|.|++++.++..... + .........++|+|+ +..|+.+. . ..
T Consensus 19 ~P~~i~~~pdG~~l~V~e~~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~~ 98 (353)
T 2g8s_A 19 HPWALAFLPDNHGMLITLRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAGT 98 (353)
T ss_dssp SEEEEEECSTTCCEEEEETTTEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEEE
T ss_pred CcEEEEEcCCCCEEEEEeCCceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCcee
Confidence 45789999999934455678999999865432111 1 122456789999995 45554432 2 23
Q ss_pred eEEEEeecccCc--eeeeE-EEe------eccceEEEEeeCCceEEEEEeC
Q psy710 71 SLHLWNFRQKRP--EIVHS-LKF------QRERITYIHLPLQSKWLYVGTE 112 (591)
Q Consensus 71 ~i~vw~~~~~~~--~~~~~-~~~------~~~~v~~~~~~~~~~~l~~~~~ 112 (591)
.|..+++..... ..... +.. .......++|.|||.+.++.+.
T Consensus 99 ~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd 149 (353)
T 2g8s_A 99 AVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGE 149 (353)
T ss_dssp EEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECC
T ss_pred EEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECC
Confidence 455566643211 11111 111 1112356999999976665443
No 311
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.64 E-value=0.018 Score=53.98 Aligned_cols=191 Identities=12% Similarity=0.056 Sum_probs=108.6
Q ss_pred ceEEEEEeecCCEEEEec------------CCCeEEEEeeccc--CceeeeEEEe-----eccceEEEEeeC--Cce-EE
Q psy710 50 AVIQMQFLTNEGALITAT------------ADDSLHLWNFRQK--RPEIVHSLKF-----QRERITYIHLPL--QSK-WL 107 (591)
Q Consensus 50 ~v~~l~~sp~~~~l~s~~------------~d~~i~vw~~~~~--~~~~~~~~~~-----~~~~v~~~~~~~--~~~-~l 107 (591)
....++..|+|..+++++ .+|.|.++|.++. +.+.+ .+.+ ..-....+.+.+ ++. +|
T Consensus 51 G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l-~~~g~~~~~~~f~PhGi~~~~d~dg~~~L 129 (355)
T 3sre_A 51 GSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSEL-EIIGNTLDISSFNPHGISTFIDDDNTVYL 129 (355)
T ss_dssp CCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEEC-EEECSSCCGGGCCEEEEEEEECTTCCEEE
T ss_pred CcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEE-EccCCCCCcCceeeeeeEEEECCCCcEEE
Confidence 445666778765444431 6899999998743 22222 2222 123566777755 343 44
Q ss_pred EEEeC---CCcEEEEEeeeee-eeceecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCCCCEEE
Q psy710 108 YVGTE---KGNIHVVNIESFT-LSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLA 183 (591)
Q Consensus 108 ~~~~~---d~~i~vwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 183 (591)
+++.. +..|.+|++.... ....+ ..+....-..++.+++.++|++.+
T Consensus 130 ~Vvnh~~~~s~ielf~~d~~~~~~~~~-----------------------------~~~~g~~~~~pND~~v~~~G~fyv 180 (355)
T 3sre_A 130 LVVNHPGSSSTVEVFKFQEEEKSLLHL-----------------------------KTIRHKLLPSVNDIVAVGPEHFYA 180 (355)
T ss_dssp EEEECSTTCCEEEEEEEETTTTEEEEE-----------------------------EEECCTTCSSEEEEEEEETTEEEE
T ss_pred EEEECCCCCCeEEEEEEECCCCEEEEE-----------------------------eccccCCCCCCceEEEeCCCCEEe
Confidence 44432 4577788776521 11111 111111124468999999998666
Q ss_pred EEe-----------------CCCcEEEeCCCCeEEEEeccCCCcEEEEEEEcCCceEEEEe-CCCcEEEEEccCC-Ccce
Q psy710 184 IGT-----------------KTGSLRLLGRPGVDAHVRHETDAAVIQMQFLTNEGALITAT-ADDSLHLWNFRQK-RPEI 244 (591)
Q Consensus 184 ~~~-----------------~dg~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~~wd~~~~-~~~~ 244 (591)
+.. ..|.|+.++....+.. ...-...+.++|+||++.|+.+. ..+.|..|++... ....
T Consensus 181 t~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~~~~~~--~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~ 258 (355)
T 3sre_A 181 TNDHYFIDPYLKSWEMHLGLAWSFVTYYSPNDVRVV--AEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTP 258 (355)
T ss_dssp EESCSCSSHHHHHHHHHTTCCCEEEEEECTTCCEEE--EEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEE
T ss_pred cCCcEeCCcccccchhhccCCccEEEEEECCeEEEe--ecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEec
Confidence 543 1356777776433322 22234788999999999887764 5688999998642 2222
Q ss_pred EEeeeeccccEEEEEecC-CCCEEEEEeCC
Q psy710 245 VHSLKFQRERITYIHLPL-QSKWLYVGTEK 273 (591)
Q Consensus 245 ~~~~~~~~~~v~~~~~sp-~~~~l~~~~~d 273 (591)
.+.+. ..+....+++++ +|++.+++..+
T Consensus 259 ~~~~~-~~g~PDGi~vD~e~G~lwva~~~~ 287 (355)
T 3sre_A 259 LRVLS-FDTLVDNISVDPVTGDLWVGCHPN 287 (355)
T ss_dssp EEEEE-CSSEEEEEEECTTTCCEEEEEESC
T ss_pred CEEEe-CCCCCceEEEeCCCCcEEEEecCC
Confidence 23332 235677888888 48766555433
No 312
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=97.62 E-value=0.047 Score=51.66 Aligned_cols=263 Identities=11% Similarity=0.127 Sum_probs=163.2
Q ss_pred CCCeEEEEeecccCceeeeEEEeeccceEEEEeeCCceEEEEEeCCCcEEEEEeeeeeeeceecccccccccCCCCCCCc
Q psy710 68 ADDSLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGP 147 (591)
Q Consensus 68 ~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (591)
.+.++.|-|+..+.....+.+. .-+.-.+|..+.++.-. ..++.++|+++.+.++...
T Consensus 46 ~~~~vvIiDl~~~~~~~rrpi~-----AdsAIMnP~~~iiALra-g~~lQiFnle~K~klks~~---------------- 103 (494)
T 1bpo_A 46 EQAQVVIIDMNDPSNPIRRPIS-----ADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHT---------------- 103 (494)
T ss_dssp TCCEEEEEETTSTTSCEEEECC-----CSEEEECSSSSCEEEEE-TTEEEEEETTTTEEEEEEE----------------
T ss_pred CCCeEEEEECCCCCcceecccc-----cceeeeCCCCcEEEEec-CCeEEEEchHHhhhhccee----------------
Confidence 4458888999876521112221 22345688888777765 5799999999865444432
Q ss_pred eeccCCCCcCcceeeeccCCCCceEEEECCCCCEEEEEeCCCcEEEeCCCCe--EEE--EeccC--CCcEEEEEEEcCCc
Q psy710 148 IIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGV--DAH--VRHET--DAAVIQMQFLTNEG 221 (591)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~--~~~--~~~~~--~~~v~~~~~~~~~~ 221 (591)
.+..|.--.|-.+. .|+..+ +..|+-|++.+. ... ..+.. ...|..-..+++.+
T Consensus 104 ------------------~~e~VvfWkWis~~-~l~lVT-~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~k 163 (494)
T 1bpo_A 104 ------------------MTDDVTFWKWISLN-TVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQK 163 (494)
T ss_dssp ------------------CSSCCCEEEEEETT-EEEEEC-SSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSS
T ss_pred ------------------cCCCceEEEecCCC-eEEEEc-CCeeEEecccCCCCchhheecchhcccceEEEEEECCCCC
Confidence 23345555554333 355444 566999988542 211 12111 56788888888999
Q ss_pred eEEEEe-------CCCcEEEEEccCCCcceEEeeeeccccEEEEEecCC---CCEEEEEeCC---ccEEEEEccCcc--c
Q psy710 222 ALITAT-------ADDSLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQ---SKWLYVGTEK---GNIHVVNIESFT--L 286 (591)
Q Consensus 222 ~l~~~~-------~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~sp~---~~~l~~~~~d---g~i~i~d~~~~~--~ 286 (591)
+++..+ -.|.+.+|..+.+ .-+.+++|......+.+..+ ...++.+... +++++.++.... .
T Consensus 164 W~~l~GI~~~~~~v~G~mQLYS~er~---~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~ 240 (494)
T 1bpo_A 164 WLLLTGISAQQNRVVGAMQLYSVDRK---VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGN 240 (494)
T ss_dssp EEEEEEEEEETTEEEEEEEEEESTTC---CEEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTC
T ss_pred eEEEEeecccCCcccceEEEeecccc---ccchheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCC
Confidence 876442 2367889998875 56778888666555554322 1344444443 689999986531 1
Q ss_pred cceeeehhhhccccccCCCCCeEEEecCCCCCCeEEEEEcCCEEEEEecccceEEEEec-cCCCeeEEEEeecCCEEEEE
Q psy710 287 SGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKLLLAYETGLVVHWDLKLKRAEFRWQ-CSEPIKSVCWHYEGKQFLCS 365 (591)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp~g~~l~s~ 365 (591)
.++... ...+.........-..++..++ ....++.-..-|.|++||+.++.++..-. ..+.|...+-+....=++..
T Consensus 241 ~~f~kk-~vdv~fppe~~~DFPvamqvs~-kygviyviTK~G~i~lyDleTgt~i~~nrIs~~~iF~t~~~~~~~Gi~~V 318 (494)
T 1bpo_A 241 QPFPKK-AVDVFFPPEAQNDFPVAMQISE-KHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGV 318 (494)
T ss_dssp CCCCCE-EEECCCCTTSTTCCEEEEEEET-TTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEETTTTEEEEE
T ss_pred CCccce-eeeeeCCcccccCceeEEEecc-cCCEEEEEecCceEEEEecccceeeeeecccCCceEEecccCCCCcEEEE
Confidence 111000 0001111222344567899999 88889999999999999999999987766 55666666665555556666
Q ss_pred ecCCcEEEEecC
Q psy710 366 HTDGTISTWAVR 377 (591)
Q Consensus 366 ~~dg~i~vwd~~ 377 (591)
...|.|.--.++
T Consensus 319 nr~GqVl~v~v~ 330 (494)
T 1bpo_A 319 NRKGQVLSVCVE 330 (494)
T ss_dssp ETTCEEEEEEEC
T ss_pred ccCceEEEEEEc
Confidence 688887777777
No 313
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=97.53 E-value=0.058 Score=50.33 Aligned_cols=251 Identities=11% Similarity=0.060 Sum_probs=127.0
Q ss_pred eeccCCcceEEEEEeecCCEEEEecCCCeEEEEeecccCceeeeEE----EeeccceEEEEeeCC---ceEEEEE-e--C
Q psy710 43 VRHETDAAVIQMQFLTNEGALITATADDSLHLWNFRQKRPEIVHSL----KFQRERITYIHLPLQ---SKWLYVG-T--E 112 (591)
Q Consensus 43 ~~~~h~~~v~~l~~sp~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~----~~~~~~v~~~~~~~~---~~~l~~~-~--~ 112 (591)
.+...-...+.|+|.|||.++++--..|.|++++...++...+..+ .........|+++|+ +..|++. + .
T Consensus 26 ~va~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~ 105 (347)
T 3das_A 26 TVATGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSAS 105 (347)
T ss_dssp EEECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSS
T ss_pred EeecCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCC
Confidence 3444445678999999999777765589999887665542222222 123456789999995 3444432 2 2
Q ss_pred CCcEEEEEeeeeeee-ceecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCCCCEEEEEeC----
Q psy710 113 KGNIHVVNIESFTLS-GYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTK---- 187 (591)
Q Consensus 113 d~~i~vwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---- 187 (591)
++.|.-|.+..+... ..+. +.......+..+.......++|.|||.+.++.+.
T Consensus 106 ~~~v~R~~~~~~~~~~~~~~----------------------~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~ 163 (347)
T 3das_A 106 DNRIVRMLYDEKKPSGEQLG----------------------APDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDT 163 (347)
T ss_dssp SEEEEEEEBCTTSCTTCCBC----------------------CCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCG
T ss_pred CCEEEEEEeCCCCcccccCC----------------------CcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCC
Confidence 344444443321100 0000 0000000011111223468999999987666442
Q ss_pred ---------CCcEEEeCCCCe---------EEEEeccCCCcEEEEEEEcCCceEEEE-eCCCcEEEEEccCCC-------
Q psy710 188 ---------TGSLRLLGRPGV---------DAHVRHETDAAVIQMQFLTNEGALITA-TADDSLHLWNFRQKR------- 241 (591)
Q Consensus 188 ---------dg~i~i~d~~~~---------~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~~wd~~~~~------- 241 (591)
.|.|.-++..+. ..+....+ .....++|+|++.++++- +.++.=.|--+..+.
T Consensus 164 ~~~qd~~~~~G~IlRi~~dG~ip~~nPf~~~~i~a~G~-RNp~Gla~dp~G~L~~~d~g~~~~deln~i~~G~nyGwP~~ 242 (347)
T 3das_A 164 GLSQDRKSLGGKILRMTPDGEPAPGNPFPGSPVYSYGH-RNVQGLAWDDKQRLFASEFGQDTWDELNAIKPGDNYGWPEA 242 (347)
T ss_dssp GGTTCTTCSTTCEEEECTTSSBCTTCSSTTCCEEEBCC-SBCCEEEECTTCCEEEEECCSSSCEEEEEECTTCBCCTTTC
T ss_pred ccccCCCCCCCEEEEEeCCCCccCCCCCCCCeEEeeCC-CCcceEEECCCCCEEEEecCCCCCceeeEEcCCCEecCCcc
Confidence 355665665432 01111121 245678999987654443 223322332222221
Q ss_pred ---------cceEEeeeeccccEEEEEecCCCCEEEEEeCCccEEEEEccCccccceeeehhhhccccccCCCCCeEEEe
Q psy710 242 ---------PEIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLS 312 (591)
Q Consensus 242 ---------~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 312 (591)
..++..+..+......++|. ++..+...-..+.|....+....... .....+.+..+.+..++
T Consensus 243 ~g~~~~~~~~~P~~~~~~~~~ap~G~~~~-~g~~~~~~l~~~~l~~v~~~~~~~~~-------~~e~~l~~~~gR~~dv~ 314 (347)
T 3das_A 243 EGKGGGSGFHDPVAQWSTDEASPSGIAYA-EGSVWMAGLRGERLWRIPLKGTAAAA-------DPQAFLEGEYGRLRTVA 314 (347)
T ss_dssp CSSCCCTTCCCCSEEECTTTCCEEEEEEE-TTEEEEEESTTCSEEEEEEETTEESS-------CCEEESTTTSSCEEEEE
T ss_pred cCCCCCccccCCcEecCCCCCCCcceEEE-cCceeeccccCCEEEEEEecCCceec-------ceEEeecCCCCCccEEE
Confidence 01122222221345666664 45555555556677766766543210 00112334457899999
Q ss_pred cCCCCCCeEEEEE
Q psy710 313 DNPLDPSKLLLAY 325 (591)
Q Consensus 313 ~sp~~~~~l~~~~ 325 (591)
..| ||.++++..
T Consensus 315 ~~p-DG~lyv~td 326 (347)
T 3das_A 315 PAG-GDKLWLVTS 326 (347)
T ss_dssp EEE-TTEEEEEEC
T ss_pred ECC-CCcEEEEEc
Confidence 999 887666543
No 314
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.48 E-value=0.012 Score=54.52 Aligned_cols=230 Identities=13% Similarity=0.068 Sum_probs=116.9
Q ss_pred CCcEEEEEeCC----CcEEEEcCCCceeEeeccCCcc-e-EEEEEeecCCEEEEecCC-----CeEEEEeecccCceeee
Q psy710 18 IQKLLAIGTKT----GSLRLLGRPGVDAHVRHETDAA-V-IQMQFLTNEGALITATAD-----DSLHLWNFRQKRPEIVH 86 (591)
Q Consensus 18 dg~~la~g~~d----g~i~lw~~~~~~~~~~~~h~~~-v-~~l~~sp~~~~l~s~~~d-----~~i~vw~~~~~~~~~~~ 86 (591)
++.+++.|+.+ ..+.+||........+..-..+ . .+++ .-+++.++.|+.+ ..+.+||..+.+...+.
T Consensus 15 ~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~-~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~ 93 (302)
T 2xn4_A 15 PKLMVVVGGQAPKAIRSVECYDFKEERWHQVAELPSRRCRAGMV-YMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVA 93 (302)
T ss_dssp CEEEEEECCBSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEE-EETTEEEEESCBCSSSBCCCEEEEETTTTEEEEEC
T ss_pred CCEEEEECCCCCCCCCcEEEEcCcCCcEeEcccCCcccccceEE-EECCEEEEEeCcCCCccccceEEECCCCCceeeCC
Confidence 45677777653 3578888775444433211111 0 1112 2366777777754 35778888766433332
Q ss_pred EEEeeccceEEEEeeCCceEEEEEeCCC-----cEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCccee
Q psy710 87 SLKFQRERITYIHLPLQSKWLYVGTEKG-----NIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKT 161 (591)
Q Consensus 87 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~-----~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (591)
.+.........+. -+++.++.|+.++ .+.+||+.+.+....-.. ..
T Consensus 94 ~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~---------------------------p~ 144 (302)
T 2xn4_A 94 NMRDRRSTLGAAV--LNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPM---------------------------NT 144 (302)
T ss_dssp CCSSCCBSCEEEE--ETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCC---------------------------SS
T ss_pred CCCccccceEEEE--ECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCC---------------------------CC
Confidence 2221111112222 2677777777543 456666665443221100 00
Q ss_pred eeccCCCCceEEEECCCCCEEEEEeCC-------CcEEEeCCCCeEEEEeccCCC--cEEEEEEEcCCceEEEEeCC---
Q psy710 162 FRHGFPYQPTAIAFDPIQKLLAIGTKT-------GSLRLLGRPGVDAHVRHETDA--AVIQMQFLTNEGALITATAD--- 229 (591)
Q Consensus 162 ~~~~~~~~v~~~~~~~~~~~l~~~~~d-------g~i~i~d~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~~~~~d--- 229 (591)
.+.. ..++.+ ++++++.|+.+ ..+..||..+.+......... .-.+++. -+++.++.|+.+
T Consensus 145 ~r~~----~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~ 217 (302)
T 2xn4_A 145 RRSS----VGVGVV--GGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGV-LNNLLYAVGGHDGPL 217 (302)
T ss_dssp CCBS----CEEEEE--TTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCBSSSS
T ss_pred cccC----ceEEEE--CCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEEE-ECCEEEEECCCCCCc
Confidence 0011 122222 56666766542 458889988876654432211 1112222 267777777654
Q ss_pred --CcEEEEEccCCCcceEEeeeeccccEEEEEecCCCCEEEEEeCCc-----cEEEEEccCccc
Q psy710 230 --DSLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEKG-----NIHVVNIESFTL 286 (591)
Q Consensus 230 --~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg-----~i~i~d~~~~~~ 286 (591)
..+.+||..+.+...+..+.........+.+ ++++++.|+.++ .+.+||+.+.+-
T Consensus 218 ~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 279 (302)
T 2xn4_A 218 VRKSVEVYDPTTNAWRQVADMNMCRRNAGVCAV--NGLLYVVGGDDGSCNLASVEYYNPTTDKW 279 (302)
T ss_dssp BCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEE
T ss_pred ccceEEEEeCCCCCEeeCCCCCCccccCeEEEE--CCEEEEECCcCCCcccccEEEEcCCCCeE
Confidence 4688999987633333222211111222222 677777777653 488899887654
No 315
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.47 E-value=0.012 Score=54.69 Aligned_cols=230 Identities=9% Similarity=-0.007 Sum_probs=118.8
Q ss_pred CcEEEEEeC--CCcEEEEcCCCceeEeeccCCc-ceEEEEEeecCCEEEEecCC----CeEEEEeecccCceeeeEEEee
Q psy710 19 QKLLAIGTK--TGSLRLLGRPGVDAHVRHETDA-AVIQMQFLTNEGALITATAD----DSLHLWNFRQKRPEIVHSLKFQ 91 (591)
Q Consensus 19 g~~la~g~~--dg~i~lw~~~~~~~~~~~~h~~-~v~~l~~sp~~~~l~s~~~d----~~i~vw~~~~~~~~~~~~~~~~ 91 (591)
+.+++.|+. ...+.+||........+..-.. .....+..-+++.++.|+.+ ..+.+||..+.+...+..+...
T Consensus 12 ~~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~ 91 (306)
T 3ii7_A 12 DYRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVFWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTP 91 (306)
T ss_dssp CEEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEEETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSC
T ss_pred ceEEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEEECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCcc
Confidence 456667765 3568888877544443321110 00111122366677777754 5678888877643333222211
Q ss_pred ccceEEEEeeCCceEEEEEeCC------CcEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCcceeeecc
Q psy710 92 RERITYIHLPLQSKWLYVGTEK------GNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHG 165 (591)
Q Consensus 92 ~~~v~~~~~~~~~~~l~~~~~d------~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (591)
......+ .-+++.++.|+.+ ..+.+||..+.+....-.. . ..+..
T Consensus 92 r~~~~~~--~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~-p--------------------------~~r~~ 142 (306)
T 3ii7_A 92 RDSLAAC--AAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSM-L--------------------------TQRCS 142 (306)
T ss_dssp CBSCEEE--EETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCC-S--------------------------SCCBS
T ss_pred ccceeEE--EECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCC-c--------------------------CCcce
Confidence 1111222 2267777887764 4577888776543322110 0 00011
Q ss_pred CCCCceEEEECCCCCEEEEEeC---------CCcEEEeCCCCeEEEEeccCCC--cEEEEEEEcCCceEEEEeCC-----
Q psy710 166 FPYQPTAIAFDPIQKLLAIGTK---------TGSLRLLGRPGVDAHVRHETDA--AVIQMQFLTNEGALITATAD----- 229 (591)
Q Consensus 166 ~~~~v~~~~~~~~~~~l~~~~~---------dg~i~i~d~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~~~~~d----- 229 (591)
| ..+.+ ++++++.|+. ...+.+||..+.+......... .-.++... +++.++.|+.+
T Consensus 143 ~----~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~ 215 (306)
T 3ii7_A 143 H----GMVEA--NGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFV-KDKIFAVGGQNGLGGL 215 (306)
T ss_dssp C----EEEEE--TTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEECCEETTEEB
T ss_pred e----EEEEE--CCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhcceEEEE-CCEEEEEeCCCCCCCC
Confidence 1 22222 5666666654 3458889988877665433211 11122222 66777776543
Q ss_pred CcEEEEEccCCCcceEEeeeeccccEEEEEecCCCCEEEEEeCC-----ccEEEEEccCccc
Q psy710 230 DSLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEK-----GNIHVVNIESFTL 286 (591)
Q Consensus 230 ~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d-----g~i~i~d~~~~~~ 286 (591)
..+.+||..+.+...+..+........++.+ ++++++.|+.+ ..+.+||+.+.+-
T Consensus 216 ~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~W 275 (306)
T 3ii7_A 216 DNVEYYDIKLNEWKMVSPMPWKGVTVKCAAV--GSIVYVLAGFQGVGRLGHILEYNTETDKW 275 (306)
T ss_dssp CCEEEEETTTTEEEECCCCSCCBSCCEEEEE--TTEEEEEECBCSSSBCCEEEEEETTTTEE
T ss_pred ceEEEeeCCCCcEEECCCCCCCccceeEEEE--CCEEEEEeCcCCCeeeeeEEEEcCCCCeE
Confidence 4688999987632222222222222233333 67777888754 4678888877544
No 316
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.46 E-value=0.014 Score=53.91 Aligned_cols=150 Identities=11% Similarity=-0.023 Sum_probs=79.8
Q ss_pred CCCEEEEEeCC-----CcEEEeCCCCeEEEEeccC--CCcEEEEEEEcCCceEEEEeCC-----CcEEEEEccCCCcceE
Q psy710 178 IQKLLAIGTKT-----GSLRLLGRPGVDAHVRHET--DAAVIQMQFLTNEGALITATAD-----DSLHLWNFRQKRPEIV 245 (591)
Q Consensus 178 ~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~~~d-----~~i~~wd~~~~~~~~~ 245 (591)
++++++.|+.+ ..+.+||..+.+....... ...-.+++. -+++.++.|+.+ ..+.+||..+.....+
T Consensus 112 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~ 190 (301)
T 2vpj_A 112 GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVV-ASGVIYCLGGYDGLNILNSVEKYDPHTGHWTNV 190 (301)
T ss_dssp TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEE-ETTEEEEECCBCSSCBCCCEEEEETTTTEEEEE
T ss_pred CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEE-ECCEEEEECCCCCCcccceEEEEeCCCCcEEeC
Confidence 56777777653 3588899887765543222 111112222 267777777654 4588999887733333
Q ss_pred EeeeeccccEEEEEecCCCCEEEEEeCC-----ccEEEEEccCccccceeeehhhhccccccCCCCCeEEEecCCCCCCe
Q psy710 246 HSLKFQRERITYIHLPLQSKWLYVGTEK-----GNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSK 320 (591)
Q Consensus 246 ~~~~~~~~~v~~~~~sp~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~ 320 (591)
..+.........+.+ ++++++.|+.+ ..+.+||+.+.+-.. ...+.........+.+ ++..
T Consensus 191 ~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~---------~~~~p~~r~~~~~~~~---~~~i 256 (301)
T 2vpj_A 191 TPMATKRSGAGVALL--NDHIYVVGGFDGTAHLSSVEAYNIRTDSWTT---------VTSMTTPRCYVGATVL---RGRL 256 (301)
T ss_dssp CCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEEE---------ECCCSSCCBSCEEEEE---TTEE
T ss_pred CCCCcccccceEEEE--CCEEEEEeCCCCCcccceEEEEeCCCCcEEE---------CCCCCCcccceeEEEE---CCEE
Confidence 222222122222333 66777777664 468899988765421 0011111111122222 4566
Q ss_pred EEEEEcC-----CEEEEEecccceEEE
Q psy710 321 LLLAYET-----GLVVHWDLKLKRAEF 342 (591)
Q Consensus 321 l~~~~~d-----g~i~iwd~~~~~~~~ 342 (591)
++.|+.+ ..+.+||..+.+...
T Consensus 257 ~v~GG~~~~~~~~~v~~yd~~~~~W~~ 283 (301)
T 2vpj_A 257 YAIAGYDGNSLLSSIECYDPIIDSWEV 283 (301)
T ss_dssp EEECCBCSSSBEEEEEEEETTTTEEEE
T ss_pred EEEcCcCCCcccccEEEEcCCCCeEEE
Confidence 6666654 467888888766543
No 317
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=97.42 E-value=0.091 Score=49.80 Aligned_cols=202 Identities=11% Similarity=0.159 Sum_probs=138.9
Q ss_pred eEEEECCCCCEEEEEeCCCcEEEeCCCCeEEEEeccCCCcEEEEEEEcCCceEEEEeCCCcEEEEEccCCCcceEEeeee
Q psy710 171 TAIAFDPIQKLLAIGTKTGSLRLLGRPGVDAHVRHETDAAVIQMQFLTNEGALITATADDSLHLWNFRQKRPEIVHSLKF 250 (591)
Q Consensus 171 ~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~ 250 (591)
.+.-.+|..+.+|.-. ...+.++|++.......+.....|.-=.|-.+. .|+..+ +..|+-|++.... .+++.+..
T Consensus 69 dsAIMnP~~~iiALra-g~~lQiFnle~K~klks~~~~e~VvfWkWis~~-~l~lVT-~taVyHWsi~~~s-~P~kvFdR 144 (494)
T 1bpo_A 69 DSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLN-TVALVT-DNAVYHWSMEGES-QPVKMFDR 144 (494)
T ss_dssp SEEEECSSSSCEEEEE-TTEEEEEETTTTEEEEEEECSSCCCEEEEEETT-EEEEEC-SSEEEEEESSSSC-CCEEEEEC
T ss_pred ceeeeCCCCcEEEEec-CCeEEEEchHHhhhhcceecCCCceEEEecCCC-eEEEEc-CCeeEEecccCCC-Cchhheec
Confidence 4667788888887765 788999999999988888776678777787444 455554 3779999997532 45665655
Q ss_pred c----cccEEEEEecCCCCEEEEEe-------CCccEEEEEccCccccceeeehhhhccccccCCCCCeEEEecCCC-C-
Q psy710 251 Q----RERITYIHLPLQSKWLYVGT-------EKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPL-D- 317 (591)
Q Consensus 251 ~----~~~v~~~~~sp~~~~l~~~~-------~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~-~- 317 (591)
| ...|..-..+++.++++..+ -.|.+.+|..+.... +.+.+|.+....+...-. .
T Consensus 145 ~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~s------------Q~ieGhaa~F~~~~~~g~~~~ 212 (494)
T 1bpo_A 145 HSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVS------------QPIEGHAASFAQFKMEGNAEE 212 (494)
T ss_dssp CGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCCE------------EEECCSEEEEEEEECTTCSSE
T ss_pred chhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeecccccc------------chheeeeeeeEEEecCCCCCC
Confidence 4 34577888899999887433 236788888876543 256777766655554320 1
Q ss_pred CCeEEEEEcC---CEEEEEecccc---------eEEEEe-c---cCCCeeEEEEeecCCEEEEEecCCcEEEEecCCCCC
Q psy710 318 PSKLLLAYET---GLVVHWDLKLK---------RAEFRW-Q---CSEPIKSVCWHYEGKQFLCSHTDGTISTWAVRPLAK 381 (591)
Q Consensus 318 ~~~l~~~~~d---g~i~iwd~~~~---------~~~~~~-~---~~~~v~~~~~sp~g~~l~s~~~dg~i~vwd~~~~~~ 381 (591)
...++.+... +.++|-++... +....+ . ..+-..++..|+.-..+..-+.-|.|++||+. ++.
T Consensus 213 ~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~i~lyDle-Tgt 291 (494)
T 1bpo_A 213 STLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLE-TGT 291 (494)
T ss_dssp EEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSEEEEEETT-TCC
T ss_pred ceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecCceEEEEecc-cce
Confidence 1233434432 78999998542 111111 1 23456678888888889999999999999999 888
Q ss_pred ceeeeccc
Q psy710 382 PVSVNQPH 389 (591)
Q Consensus 382 ~~~~~~~~ 389 (591)
++..-+-.
T Consensus 292 ~i~~nrIs 299 (494)
T 1bpo_A 292 CIYMNRIS 299 (494)
T ss_dssp EEEEEECC
T ss_pred eeeeeccc
Confidence 87766555
No 318
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=97.39 E-value=0.11 Score=50.89 Aligned_cols=64 Identities=8% Similarity=0.054 Sum_probs=39.8
Q ss_pred CcceEEEEEeecCCEEEEecCCCeEEEEeecccCceeeeEEEe------eccceEEEEeeCC---ceEEEEEe
Q psy710 48 DAAVIQMQFLTNEGALITATADDSLHLWNFRQKRPEIVHSLKF------QRERITYIHLPLQ---SKWLYVGT 111 (591)
Q Consensus 48 ~~~v~~l~~sp~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~------~~~~v~~~~~~~~---~~~l~~~~ 111 (591)
-...+.|+|.|+|+++++-...+.|.+++..+++...+..+.. .......|+|+|+ +..|++..
T Consensus 26 l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~ 98 (454)
T 1cru_A 26 LNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISG 98 (454)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEE
T ss_pred CCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEE
Confidence 3456799999999877776444578887765554222322221 2345678999995 55554443
No 319
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.39 E-value=0.061 Score=49.72 Aligned_cols=233 Identities=11% Similarity=0.005 Sum_probs=118.6
Q ss_pred CEEEEecC--CCeEEEEeecccCceeeeEEEeeccceEEEEeeCCceEEEEEeCC----CcEEEEEeeeeeeeceecccc
Q psy710 61 GALITATA--DDSLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEK----GNIHVVNIESFTLSGYIINWN 134 (591)
Q Consensus 61 ~~l~s~~~--d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----~~i~vwd~~~~~~~~~~~~~~ 134 (591)
..++.|+. ...+.+||..+.+...+..+.........+ .-+++.++.|+.+ ..+.+||..+.+....-...
T Consensus 13 ~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~--~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p- 89 (306)
T 3ii7_A 13 YRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACV--FWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPP- 89 (306)
T ss_dssp EEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEE--EETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCS-
T ss_pred eEEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEE--EECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCC-
Confidence 34555654 356788888776433332222111111222 2367777777754 56777887765443221100
Q ss_pred cccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCCCCEEEEEeCC------CcEEEeCCCCeEEEEeccCC
Q psy710 135 KAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTKT------GSLRLLGRPGVDAHVRHETD 208 (591)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d------g~i~i~d~~~~~~~~~~~~~ 208 (591)
..+.+| ..+.+ ++++++.|+.+ ..+.+||..+.+........
T Consensus 90 --------------------------~~r~~~----~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p 137 (306)
T 3ii7_A 90 --------------------------TPRDSL----AACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSML 137 (306)
T ss_dssp --------------------------SCCBSC----EEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCS
T ss_pred --------------------------ccccce----eEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCc
Confidence 000111 22222 56777777765 45888998887765443221
Q ss_pred C--cEEEEEEEcCCceEEEEeC---------CCcEEEEEccCCCcceEEeeeeccccEEEEEecCCCCEEEEEeCC----
Q psy710 209 A--AVIQMQFLTNEGALITATA---------DDSLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEK---- 273 (591)
Q Consensus 209 ~--~v~~~~~~~~~~~l~~~~~---------d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d---- 273 (591)
. .-.+++. -+++.++.|+. -..+.+||..+.....+..+......-..+.+ ++++++.|+.+
T Consensus 138 ~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~ 214 (306)
T 3ii7_A 138 TQRCSHGMVE-ANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFV--KDKIFAVGGQNGLGG 214 (306)
T ss_dssp SCCBSCEEEE-ETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTEE
T ss_pred CCcceeEEEE-ECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhcceEEEE--CCEEEEEeCCCCCCC
Confidence 1 1112222 26666666653 34588999987733333222221122222233 66777776653
Q ss_pred -ccEEEEEccCccccceeeehhhhccccccCCCCCeEEEecCCCCCCeEEEEEcC-----CEEEEEecccceEEEE
Q psy710 274 -GNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKLLLAYET-----GLVVHWDLKLKRAEFR 343 (591)
Q Consensus 274 -g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~ 343 (591)
..+.+||+.+.+-.. ...+.........+.+ ++..++.|+.+ ..+.+||..+.+....
T Consensus 215 ~~~~~~yd~~~~~W~~---------~~~~p~~r~~~~~~~~---~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~ 278 (306)
T 3ii7_A 215 LDNVEYYDIKLNEWKM---------VSPMPWKGVTVKCAAV---GSIVYVLAGFQGVGRLGHILEYNTETDKWVAN 278 (306)
T ss_dssp BCCEEEEETTTTEEEE---------CCCCSCCBSCCEEEEE---TTEEEEEECBCSSSBCCEEEEEETTTTEEEEE
T ss_pred CceEEEeeCCCCcEEE---------CCCCCCCccceeEEEE---CCEEEEEeCcCCCeeeeeEEEEcCCCCeEEeC
Confidence 358889988764421 0011111111222333 45677777643 5788999988765543
No 320
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.38 E-value=0.063 Score=50.36 Aligned_cols=193 Identities=7% Similarity=0.076 Sum_probs=108.0
Q ss_pred CCcEEEeCCCCcEEEEE------------eCCCcEEEEcCCC--ceeEe--ecc-----CCcceEEEEEee--cCC-EEE
Q psy710 9 QPTAIAFDPIQKLLAIG------------TKTGSLRLLGRPG--VDAHV--RHE-----TDAAVIQMQFLT--NEG-ALI 64 (591)
Q Consensus 9 ~v~~~~~spdg~~la~g------------~~dg~i~lw~~~~--~~~~~--~~~-----h~~~v~~l~~sp--~~~-~l~ 64 (591)
..-.++..|+|..++++ ..+|.|.++|.+. ..... +.+ .......+.+.+ ++. +|+
T Consensus 51 G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~ 130 (355)
T 3sre_A 51 GSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLL 130 (355)
T ss_dssp CCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEE
T ss_pred CcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEE
Confidence 45678888988665554 1689999999762 22222 222 234677788777 343 344
Q ss_pred Ee-cC--CCeEEEEeecccCc--eeeeEEEeec-cceEEEEeeCCceEEEEEeC---C--------------CcEEEEEe
Q psy710 65 TA-TA--DDSLHLWNFRQKRP--EIVHSLKFQR-ERITYIHLPLQSKWLYVGTE---K--------------GNIHVVNI 121 (591)
Q Consensus 65 s~-~~--d~~i~vw~~~~~~~--~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~---d--------------~~i~vwd~ 121 (591)
.+ .. +.+|.+|+++.+.. ..+..+.+.. ...+.+.+.++|...++... | |.|+.++.
T Consensus 131 Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~ 210 (355)
T 3sre_A 131 VVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP 210 (355)
T ss_dssp EEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT
T ss_pred EEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC
Confidence 33 22 57889998876432 2233333321 34788889999887666431 1 22222221
Q ss_pred eeeeeeceecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCCCCEEEEEe-CCCcEEEeCCCC-e
Q psy710 122 ESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGT-KTGSLRLLGRPG-V 199 (591)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~i~d~~~-~ 199 (591)
++.. .+..+ -...+.++|+||++.+.++. ..+.|+.|++.. +
T Consensus 211 --~~~~---------------------------------~~~~~-l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g 254 (355)
T 3sre_A 211 --NDVR---------------------------------VVAEG-FDFANGINISPDGKYVYIAELLAHKIHVYEKHANW 254 (355)
T ss_dssp --TCCE---------------------------------EEEEE-ESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTS
T ss_pred --CeEE---------------------------------EeecC-CcccCcceECCCCCEEEEEeCCCCeEEEEEECCCC
Confidence 1110 00001 13358999999998777665 478899988742 2
Q ss_pred EEE--EeccCCCcEEEEEEEc-CCceEEEEeCC-CcEEEEEc
Q psy710 200 DAH--VRHETDAAVIQMQFLT-NEGALITATAD-DSLHLWNF 237 (591)
Q Consensus 200 ~~~--~~~~~~~~v~~~~~~~-~~~~l~~~~~d-~~i~~wd~ 237 (591)
... .........-.++..+ +|++.+++..+ +.|..|+.
T Consensus 255 ~l~~~~~~~~~g~PDGi~vD~e~G~lwva~~~~g~~v~~~~P 296 (355)
T 3sre_A 255 TLTPLRVLSFDTLVDNISVDPVTGDLWVGCHPNGMRIFFYDA 296 (355)
T ss_dssp CEEEEEEEECSSEEEEEEECTTTCCEEEEEESCHHHHHSCCT
T ss_pred cEecCEEEeCCCCCceEEEeCCCCcEEEEecCCceEEEEECC
Confidence 211 1112234667788888 48766655433 33444443
No 321
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.37 E-value=0.028 Score=51.93 Aligned_cols=185 Identities=10% Similarity=-0.011 Sum_probs=98.4
Q ss_pred CCCEEEEEeCC-----CcEEEeCCCCeEEEEeccCCC-c-EEEEEEEcCCceEEEEeCCC-----cEEEEEccCCCcceE
Q psy710 178 IQKLLAIGTKT-----GSLRLLGRPGVDAHVRHETDA-A-VIQMQFLTNEGALITATADD-----SLHLWNFRQKRPEIV 245 (591)
Q Consensus 178 ~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~-~-v~~~~~~~~~~~l~~~~~d~-----~i~~wd~~~~~~~~~ 245 (591)
++.+++.|+.+ ..+.+||..+.+......... . -.+++. -+++.++.|+.++ .+.+||..+.+...+
T Consensus 61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~ 139 (302)
T 2xn4_A 61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAV-LNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHV 139 (302)
T ss_dssp TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEEEEECSSCEEEEEEEEETTTTEEEEE
T ss_pred CCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEE-ECCEEEEEcCCCCCccCceEEEEeCCCCeEeec
Confidence 56677777754 358889988777655433211 1 112222 2677777776553 477888877633333
Q ss_pred EeeeeccccEEEEEecCCCCEEEEEeCC-------ccEEEEEccCccccceeeehhhhccccccCCCCCeEEEecCCCCC
Q psy710 246 HSLKFQRERITYIHLPLQSKWLYVGTEK-------GNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDP 318 (591)
Q Consensus 246 ~~~~~~~~~v~~~~~sp~~~~l~~~~~d-------g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~ 318 (591)
..+.........+.+ ++++++.|+.+ ..+.+||+.+.+-... ..+.........+.+ ++
T Consensus 140 ~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~---------~~~p~~r~~~~~~~~---~~ 205 (302)
T 2xn4_A 140 APMNTRRSSVGVGVV--GGLLYAVGGYDVASRQCLSTVECYNATTNEWTYI---------AEMSTRRSGAGVGVL---NN 205 (302)
T ss_dssp CCCSSCCBSCEEEEE--TTEEEEECCEETTTTEECCCEEEEETTTTEEEEE---------CCCSSCCBSCEEEEE---TT
T ss_pred CCCCCcccCceEEEE--CCEEEEEeCCCCCCCccccEEEEEeCCCCcEEEC---------CCCccccccccEEEE---CC
Confidence 222222122222223 56666666542 3588888877644210 011111111122222 45
Q ss_pred CeEEEEEcC-----CEEEEEecccceEEEEeccC-CCeeEEEEeecCCEEEEEecCC-----cEEEEecC
Q psy710 319 SKLLLAYET-----GLVVHWDLKLKRAEFRWQCS-EPIKSVCWHYEGKQFLCSHTDG-----TISTWAVR 377 (591)
Q Consensus 319 ~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~-~~v~~~~~sp~g~~l~s~~~dg-----~i~vwd~~ 377 (591)
..++.|+.+ ..+.+||+.+++....-... ......+..-++++++.|+.++ .+.+||+.
T Consensus 206 ~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~ 275 (302)
T 2xn4_A 206 LLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVCAVNGLLYVVGGDDGSCNLASVEYYNPT 275 (302)
T ss_dssp EEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETT
T ss_pred EEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCeEEEECCEEEEECCcCCCcccccEEEEcCC
Confidence 666666654 46889999988766554311 1111122233777788877654 37778877
No 322
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=97.29 E-value=0.26 Score=52.27 Aligned_cols=324 Identities=14% Similarity=0.045 Sum_probs=177.3
Q ss_pred CCCcEEEeCCCCcEEEEEeCCCcEEEEcCCCceeEeeccC------CcceEEEEEeecCCEEEEecCCCeEEEEeecccC
Q psy710 8 YQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGVDAHVRHET------DAAVIQMQFLTNEGALITATADDSLHLWNFRQKR 81 (591)
Q Consensus 8 ~~v~~~~~spdg~~la~g~~dg~i~lw~~~~~~~~~~~~h------~~~v~~l~~sp~~~~l~s~~~d~~i~vw~~~~~~ 81 (591)
..|.++...++|++.+ |+.+| +..++........+... ...|.++...+++..|..+.. +-+..++..+++
T Consensus 146 ~~i~~i~~d~~g~lWi-gt~~G-l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~~ 222 (758)
T 3ott_A 146 NTIYSIIRTKDNQIYV-GTYNG-LCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPSTGQ 222 (758)
T ss_dssp SCEEEEEECTTCCEEE-EETTE-EEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEETTTTE
T ss_pred CeEEEEEEcCCCCEEE-EeCCC-HhhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEEC-CCCeEEcCCCCe
Confidence 3577888888887655 55554 77777664444332211 234888887777665555553 457778876653
Q ss_pred ceeeeEEEeeccceEEEEeeCCceEEEEEeCCCcEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCccee
Q psy710 82 PEIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKT 161 (591)
Q Consensus 82 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (591)
......+ ....|.++....++.+.+ |+. +-+.+++..+++.......... . .
T Consensus 223 ~~~~~~l--~~~~i~~i~~d~~g~lWi-gT~-~Gl~~~~~~~~~~~~~~~~~~~-~----------------------~- 274 (758)
T 3ott_A 223 IKQTEAF--HNNSIKSLALDGNGDLLA-GTD-NGLYVYHNDTTPLQHIIHDSRN-I----------------------Q- 274 (758)
T ss_dssp EEEEEEE--EEEEEEEEEECTTCCEEE-EET-TEEEEECCTTSCCEEECCCTTC-T----------------------T-
T ss_pred EEeccCC--CCCeEEEEEEcCCCCEEE-EeC-CceeEEecCCCcEEEEEcCCCC-c----------------------C-
Confidence 2112222 234588887777666544 454 4577787765433211110000 0 0
Q ss_pred eeccCCCCceEEEECCCCCEEEEEeCCCcEEEeCCCC-eEEEEec-----cCCCcEEEEEEEcCCceEEEEeCCCcEEEE
Q psy710 162 FRHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPG-VDAHVRH-----ETDAAVIQMQFLTNEGALITATADDSLHLW 235 (591)
Q Consensus 162 ~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~-~~~~~~~-----~~~~~v~~~~~~~~~~~l~~~~~d~~i~~w 235 (591)
.-....|.++..+.++. |-+|+..| +.++.... .+..... .....|.++.-..+|...+ |+.+| +..+
T Consensus 275 --~l~~~~i~~i~~D~~g~-lWiGT~~G-l~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~D~~g~lWi-Gt~~G-l~~~ 348 (758)
T 3ott_A 275 --SLTNNIIWNIFADQEHN-IWLGTDYG-ISLSRYNSALQFIPISQITGTGDGNQFYSLFRDSKGFYWF-GGANG-LIRF 348 (758)
T ss_dssp --SCSCSCEEEEEECTTCC-EEEEESSS-EEEECCCC-CEEEEHHHHSCSCCCCBEEEEEECTTCCEEE-EETTE-EEEE
T ss_pred --cCCcCeEEEEEEcCCCC-EEEEeCCc-ccccccCCceeEEecccCCCCCCCceEEEEEEcCCCCEEE-eeCCc-ceee
Confidence 00134578888888877 55667667 55544322 1111111 1134688888777776444 44554 5566
Q ss_pred EccCCCcceEEeee-------eccccEEEEEecCCCCEEEEEeCCccEEEEEccCccccceeeehhhhccccccCCCCCe
Q psy710 236 NFRQKRPEIVHSLK-------FQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPI 308 (591)
Q Consensus 236 d~~~~~~~~~~~~~-------~~~~~v~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v 308 (591)
+..++.......+. .....|.++.-+.+|+ |..|+. +-+..||..+.+...+..... ........|
T Consensus 349 ~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~-lWigt~-~GL~~~~~~~~~~~~~~~~~~-----~~~~~~~~v 421 (758)
T 3ott_A 349 TDPAGERHDAIWYRMGDKTYPLSHNRIRHIYEDKEQQ-LWIATD-GSINRYDYATRQFIHYNIVDN-----TGTYNTNWT 421 (758)
T ss_dssp SCTTSSCCCCEEECTTCSSSCCSCSCEEEEEECTTSC-EEEEET-TEEEEEETTTTEEEEEEEECC-----C--CBSSSE
T ss_pred cccccccceeEEeccCCcCCCCCCCceEEEEECCCCC-EEEEeC-CcHhhcCcCCCcEEEeecCCC-----cCCCCCceE
Confidence 65442111111111 1124588888888877 455664 568899988766532211000 000123457
Q ss_pred EEEecCCCCCCeEEEEEcCCEEEEEeccc------ceEE--EEec-----cCCCeeEEEEeecCCEEEEEecCCcEEEEe
Q psy710 309 IHLSDNPLDPSKLLLAYETGLVVHWDLKL------KRAE--FRWQ-----CSEPIKSVCWHYEGKQFLCSHTDGTISTWA 375 (591)
Q Consensus 309 ~~~~~sp~~~~~l~~~~~dg~i~iwd~~~------~~~~--~~~~-----~~~~v~~~~~sp~g~~l~s~~~dg~i~vwd 375 (591)
.++...+ ++ .|..|+..+-+.++|..+ .... ..+. ....|.++...++|++.+.++..+-|..+|
T Consensus 422 ~~i~~d~-~g-~lWigT~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~~~t~~Gl~~~d 499 (758)
T 3ott_A 422 YYIFEDT-AG-QLWISTCLGGIFVVDKHKLMQSTSGQYIAEQNYSVHNGLSGMFINQIIPDNEGNVWVLLYNNKGIDKIN 499 (758)
T ss_dssp EEEEECT-TS-EEEEEESSSCEEEEEHHHHHHCCSSEEECSEEECGGGTCSCSCEEEEEECTTSCEEEEETTCSSEEEEE
T ss_pred EEEEEcC-CC-CEEEEECCCceEEEccccccccCCcceecccccccccccccceeeeEEEcCCCCEEEEccCCCCcEEEe
Confidence 8887766 54 566677666677888653 1121 1211 234588898888888776444445588888
Q ss_pred cC
Q psy710 376 VR 377 (591)
Q Consensus 376 ~~ 377 (591)
..
T Consensus 500 ~~ 501 (758)
T 3ott_A 500 PR 501 (758)
T ss_dssp TT
T ss_pred CC
Confidence 87
No 323
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=97.27 E-value=0.11 Score=47.64 Aligned_cols=175 Identities=9% Similarity=-0.051 Sum_probs=98.1
Q ss_pred EEEECCCCCEEEEEe----CCCcEEEeCCCCeEEEEeccCCCcEEEEEEEcCCceEEEEeC-CCcEEEEEccCCCcceEE
Q psy710 172 AIAFDPIQKLLAIGT----KTGSLRLLGRPGVDAHVRHETDAAVIQMQFLTNEGALITATA-DDSLHLWNFRQKRPEIVH 246 (591)
Q Consensus 172 ~~~~~~~~~~l~~~~----~dg~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~~wd~~~~~~~~~~ 246 (591)
+..++++++.|+-.. .+..|+..++.+........+ .+ ..++++++.|+-.+. ...|...++.... ...
T Consensus 108 ~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~~lt~~--~~--~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~--~~~ 181 (302)
T 3s25_A 108 CIYASLIGNYIYYLHYDTQTATSLYRIRIDGEEKKKIKNH--YL--FTCNTSDRYFYYNNPKNGQLYRYDTASQS--EAL 181 (302)
T ss_dssp EEEEEEETTEEEEEEESSSSCEEEEEEETTSCCCEEEESS--CC--CCSEEETTEEEEECTTTCCEEEEETTTTE--EEE
T ss_pred ccEEEEeCCEEEEEeecCCCCceEEEEECCCCCeEEEeCC--Cc--eEeeEECCEEEEEeCCCceEEEEECCCCC--EEE
Confidence 346778888888765 344566666665544444433 22 456788888886665 5678877877652 222
Q ss_pred eeeeccccEEEEEecCCCCEEEEEeCCc--cEEEEEccCccccceeeehhhhccccccCCCCCeEEEecCCCCCCeEEEE
Q psy710 247 SLKFQRERITYIHLPLQSKWLYVGTEKG--NIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKLLLA 324 (591)
Q Consensus 247 ~~~~~~~~v~~~~~sp~~~~l~~~~~dg--~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~ 324 (591)
.+. +... ..+.|++.+|+-...++ .|..-++...... .+.. ..+ ..|+| ++++|+.+
T Consensus 182 l~~---~~~~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~~~------------~Lt~--~~~--~~~~~-~g~~Iy~~ 240 (302)
T 3s25_A 182 FYD---CNCY-KPVVLDDTNVYYMDVNRDNAIVHVNINNPNPV------------VLTE--ANI--EHYNV-YGSLIFYQ 240 (302)
T ss_dssp EEC---SCEE-EEEEEETTEEEEEEGGGTTEEEEECSSSCCCE------------ECSC--SCE--EEEEE-ETTEEEEE
T ss_pred EeC---CCcc-ceeeecCCEEEEEEcCCCcEEEEEECCCCCeE------------EEeC--CCc--ceEEE-CCCEEEEE
Confidence 222 2222 23558898888765443 5666666654431 2211 223 34778 88888776
Q ss_pred Ec--CCEEEEEecccceEEEEeccCCCeeEEEEeecCCEEEEEe-cCCcEEEEecC
Q psy710 325 YE--TGLVVHWDLKLKRAEFRWQCSEPIKSVCWHYEGKQFLCSH-TDGTISTWAVR 377 (591)
Q Consensus 325 ~~--dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~g~~l~s~~-~dg~i~vwd~~ 377 (591)
.. .+.|..-++........... .+. ++++.+.+|.-.. ..+.|..-++.
T Consensus 241 ~~~~~~~i~~~~~DG~~r~~l~~~--~~~--~i~i~~d~Iy~td~~~~~i~~~~~d 292 (302)
T 3s25_A 241 RGGDNPALCVVKNDGTGFKELAKG--EFC--NINVTSQYVYFTDFVSNKEYCTSTQ 292 (302)
T ss_dssp ECSSSCEEEEEETTSCCCEEEEES--CEE--EEEECSSEEEEEETTTCCEEEEESS
T ss_pred ECCCCcEEEEEECCCCccEEeeCC--ccc--eEEEeCCEEEEEECCCCeEEEEECC
Confidence 43 35666667766544433332 233 4555666666554 33444444443
No 324
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=97.25 E-value=0.11 Score=47.26 Aligned_cols=236 Identities=15% Similarity=0.207 Sum_probs=146.2
Q ss_pred EEEeCCCCcEEEEEeCCCcEEEEcCCC-ceeEeeccCCcceEEEEEeecCCEEEEecCCCeEEEEeecccCceeeeEEEe
Q psy710 12 AIAFDPIQKLLAIGTKTGSLRLLGRPG-VDAHVRHETDAAVIQMQFLTNEGALITATADDSLHLWNFRQKRPEIVHSLKF 90 (591)
Q Consensus 12 ~~~~spdg~~la~g~~dg~i~lw~~~~-~~~~~~~~h~~~v~~l~~sp~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~ 90 (591)
+.-.+|..+.+|.=. ..+++++|++. .+++...- ..+|.-=.|-.+. .|+-.+ +..|.-|+++... .+.+.+..
T Consensus 71 sAIMnP~~~ViALra-g~~LQiFnletK~klks~~~-~e~VvfWkWis~~-~L~lVT-~taVyHWs~~~~s-~P~kvFdR 145 (365)
T 2xzh_A 71 SAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISLN-TVALVT-DNAVYHWSMEGES-QPVKMFDR 145 (365)
T ss_dssp EEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEEC-SSCEEEEEECSSS-EEEEEE-SSEEEEEESSTTC-CCEEEEEC
T ss_pred eeeeCCCccEEEEec-CCeEEEechHHhhhhcceec-CCccEEEEecCCC-eEEEEc-CCcEEEEcccCCC-CCceeeec
Confidence 455688888888665 67899999984 44444433 4577777787653 444442 4789999997643 45666665
Q ss_pred ec----cceEEEEeeCCceEEEEEeC-------CCcEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCcc
Q psy710 91 QR----ERITYIHLPLQSKWLYVGTE-------KGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPS 159 (591)
Q Consensus 91 ~~----~~v~~~~~~~~~~~l~~~~~-------d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (591)
|. ..|.....+++.++++..+- .|.+.+|+.+.+.. +.++
T Consensus 146 ~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~s-Q~ie---------------------------- 196 (365)
T 2xzh_A 146 HSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVS-QPIE---------------------------- 196 (365)
T ss_dssp CGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTEE-EEEC----------------------------
T ss_pred chhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeeccccc-ceee----------------------------
Confidence 53 35777777889998776542 35667777655321 1222
Q ss_pred eeeeccCCCCceEEEECCCC-----CEEEEEeC---CCcEEEeCCCCe---------EEE-EeccC---CCcEEEEEEEc
Q psy710 160 KTFRHGFPYQPTAIAFDPIQ-----KLLAIGTK---TGSLRLLGRPGV---------DAH-VRHET---DAAVIQMQFLT 218 (591)
Q Consensus 160 ~~~~~~~~~~v~~~~~~~~~-----~~l~~~~~---dg~i~i~d~~~~---------~~~-~~~~~---~~~v~~~~~~~ 218 (591)
||.... ..+-.+| ++++.+.. .+.+++.++... +.. ...+. ..-..++..++
T Consensus 197 -----Ghaa~F--~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~ 269 (365)
T 2xzh_A 197 -----GHAASF--AQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISE 269 (365)
T ss_dssp -----CSEEEE--EEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEET
T ss_pred -----eeeeee--EEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecc
Confidence 221100 0111111 12332222 246777765321 111 11111 44566788888
Q ss_pred CCceEEEEeCCCcEEEEEccCCCcceEEeeeeccccEEEEEecCCCCEEEEEeCCccEEEEEccCcccccee
Q psy710 219 NEGALITATADDSLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYI 290 (591)
Q Consensus 219 ~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~ 290 (591)
....++.-+.-|.|.+||++++ .++..-+...+.|...+.+.+..-++.-...|.|.-..++.....+|.
T Consensus 270 kygviyviTK~G~ihlyDleTg--t~i~~nrIS~d~iF~ta~~~~~~Gi~~Vnr~GqVl~v~v~~~~ivpyi 339 (365)
T 2xzh_A 270 KHDVVFLITKYGYIHLYDLETG--TCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENIIPYI 339 (365)
T ss_dssp TTTEEEEEETTSEEEEEETTTC--CEEEEEECCSSCEEEEEEEGGGTEEEEEETTCEEEEEEECTTTHHHHH
T ss_pred cCCEEEEEeCCcEEEEEEcccC--cEEEEeccCCCceEEecccCCCCcEEEEcCCCEEEEEEECcccEehhh
Confidence 8888888899999999999999 777777666677766666555445555668898888888877665443
No 325
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=97.25 E-value=0.29 Score=51.92 Aligned_cols=314 Identities=12% Similarity=0.098 Sum_probs=170.5
Q ss_pred CCCCcEEEeCCCCcEEEEEeCCCcEEEEcCCCceeEeec----cCCcceEEEEEeecCCEEEEecCCCeEEEEeecccCc
Q psy710 7 PYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGVDAHVRH----ETDAAVIQMQFLTNEGALITATADDSLHLWNFRQKRP 82 (591)
Q Consensus 7 ~~~v~~~~~spdg~~la~g~~dg~i~lw~~~~~~~~~~~----~h~~~v~~l~~sp~~~~l~s~~~d~~i~vw~~~~~~~ 82 (591)
...|+++.-..+|. |-.|+.+| +..||-.. ...+. .....|.++.-..++ .|..++.+| +..||..+.+
T Consensus 21 ~n~V~~I~qD~~G~-lWigT~~G-L~ryDG~~--~~~~~~~~~~~~~~i~~i~~d~~g-~lWigT~~G-l~~yd~~~~~- 93 (758)
T 3ott_A 21 ASVVSCFLQDSEGL-IWIGSNKG-LFSYDGYS--TQQHFTYGENNNTRIYCGVIIDNT-YLYMGTDNG-ILVYNYRADR- 93 (758)
T ss_dssp CCCEEEEEECTTSC-EEEEESSC-EEEECSSC--EEECSCTTSTTSSCEEEEEEETTT-EEEEEETTE-EEEEETTTTE-
T ss_pred cceEEEEEECCCCC-EEEEECCC-ccccCCCc--eEEEEccCCCCCceEEEEEEcCCC-cEEEEeCCC-eEEEeCCCCE-
Confidence 35688999888885 45577777 55666322 11111 123568888777665 455555554 6788877652
Q ss_pred eeeeEEEeeccceEEEEeeCCceEEEEEeCCCcEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCcceee
Q psy710 83 EIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTF 162 (591)
Q Consensus 83 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (591)
...........|.++.. .++ .|..++.+ .+..+|..+++....... ..
T Consensus 94 -f~~~~~~~~~~i~~i~~-~~g-~lWigt~~-Gl~~~~~~~~~~~~~~~~-~~--------------------------- 141 (758)
T 3ott_A 94 -YEQPETDFPTDVRTMAL-QGD-TLWLGALN-GLYTYQLQSRKLTSFDTR-RN--------------------------- 141 (758)
T ss_dssp -ECCCSCCCCSCEEEEEE-ETT-EEEEEETT-EEEEEETTTCCEEEECHH-HH---------------------------
T ss_pred -EECcccCCCceEEEEEe-cCC-cEEEEcCC-cceeEeCCCCeEEEeccC-CC---------------------------
Confidence 11111111234666654 344 45556655 677888765443221000 00
Q ss_pred eccCCCCceEEEECCCCCEEEEEeCCCcEEEeCCCCeEEEEeccC------CCcEEEEEEEcCCceEEEEeCCCcEEEEE
Q psy710 163 RHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGVDAHVRHET------DAAVIQMQFLTNEGALITATADDSLHLWN 236 (591)
Q Consensus 163 ~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~------~~~v~~~~~~~~~~~l~~~~~d~~i~~wd 236 (591)
......|.++..+.++.+. +|+.+| +..++..+......... ...|.++...+++..|..++. +-+..+|
T Consensus 142 -~l~~~~i~~i~~d~~g~lW-igt~~G-l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~ 217 (758)
T 3ott_A 142 -GLPNNTIYSIIRTKDNQIY-VGTYNG-LCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYF 217 (758)
T ss_dssp -CCSCSCEEEEEECTTCCEE-EEETTE-EEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEE
T ss_pred -CcCCCeEEEEEEcCCCCEE-EEeCCC-HhhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEEC-CCCeEEc
Confidence 0012347788888888754 466554 77788766554322111 224888888877765555554 4577888
Q ss_pred ccCCCcceEEeeeeccccEEEEEecCCCCEEEEEeCCccEEEEEccCccccceeeehhhhccccccCCCCCeEEEecCCC
Q psy710 237 FRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPL 316 (591)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~ 316 (591)
..+++......+ ....|.++....+|.+ .+|+.+ -+.+++..+.+...+.... .....-....|.++....
T Consensus 218 ~~~~~~~~~~~l--~~~~i~~i~~d~~g~l-WigT~~-Gl~~~~~~~~~~~~~~~~~----~~~~~l~~~~i~~i~~D~- 288 (758)
T 3ott_A 218 PSTGQIKQTEAF--HNNSIKSLALDGNGDL-LAGTDN-GLYVYHNDTTPLQHIIHDS----RNIQSLTNNIIWNIFADQ- 288 (758)
T ss_dssp TTTTEEEEEEEE--EEEEEEEEEECTTCCE-EEEETT-EEEEECCTTSCCEEECCCT----TCTTSCSCSCEEEEEECT-
T ss_pred CCCCeEEeccCC--CCCeEEEEEEcCCCCE-EEEeCC-ceeEEecCCCcEEEEEcCC----CCcCcCCcCeEEEEEEcC-
Confidence 776522222222 2356888888877774 446654 4778887665442110000 000011234688888776
Q ss_pred CCCeEEEEEcCCEEEEEecccceEEEE-ec------cCCCeeEEEEeecCCEEEEEecCCcEEEEecC
Q psy710 317 DPSKLLLAYETGLVVHWDLKLKRAEFR-WQ------CSEPIKSVCWHYEGKQFLCSHTDGTISTWAVR 377 (591)
Q Consensus 317 ~~~~l~~~~~dg~i~iwd~~~~~~~~~-~~------~~~~v~~~~~sp~g~~l~s~~~dg~i~vwd~~ 377 (591)
++. |-.|+..| +.++... ...... .. ....|.++.-..+|.+.+. +.+| +..++..
T Consensus 289 ~g~-lWiGT~~G-l~~~~~~-~~~~~~~~~~~~~~~~~~~v~~i~~D~~g~lWiG-t~~G-l~~~~~~ 351 (758)
T 3ott_A 289 EHN-IWLGTDYG-ISLSRYN-SALQFIPISQITGTGDGNQFYSLFRDSKGFYWFG-GANG-LIRFTDP 351 (758)
T ss_dssp TCC-EEEEESSS-EEEECCC-C-CEEEEHHHHSCSCCCCBEEEEEECTTCCEEEE-ETTE-EEEESCT
T ss_pred CCC-EEEEeCCc-ccccccC-CceeEEecccCCCCCCCceEEEEEEcCCCCEEEe-eCCc-ceeeccc
Confidence 554 55555667 4444332 211111 11 1345788887777775554 4555 5556654
No 326
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.24 E-value=0.036 Score=51.35 Aligned_cols=151 Identities=12% Similarity=0.021 Sum_probs=79.6
Q ss_pred CCCEEEEEeCC-----CcEEEeCCCCeEEEEeccCCC--cEEEEEEEcCCceEEEEeCC-----CcEEEEEccCCCcceE
Q psy710 178 IQKLLAIGTKT-----GSLRLLGRPGVDAHVRHETDA--AVIQMQFLTNEGALITATAD-----DSLHLWNFRQKRPEIV 245 (591)
Q Consensus 178 ~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~~~~~d-----~~i~~wd~~~~~~~~~ 245 (591)
++++++.|+.+ ..+.+||..+.+......... .-.+++.. +++.++.|+.+ ..+.+||..+.....+
T Consensus 121 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~ 199 (308)
T 1zgk_A 121 DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL-NRLLYAVGGFDGTNRLNSAECYYPERNEWRMI 199 (308)
T ss_dssp TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TTEEEEECCBCSSCBCCCEEEEETTTTEEEEC
T ss_pred CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE-CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeC
Confidence 56677776643 457889988777665432211 11122222 66777777654 4588999887632222
Q ss_pred EeeeeccccEEEEEecCCCCEEEEEeCC-----ccEEEEEccCccccceeeehhhhccccccCCCCCeEEEecCCCCCCe
Q psy710 246 HSLKFQRERITYIHLPLQSKWLYVGTEK-----GNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSK 320 (591)
Q Consensus 246 ~~~~~~~~~v~~~~~sp~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~ 320 (591)
..+.........+.+ ++++++.|+.+ ..+.+||+.+.+-.. ...+.........+.+ ++..
T Consensus 200 ~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~---------~~~~p~~r~~~~~~~~---~~~i 265 (308)
T 1zgk_A 200 TAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETETWTF---------VAPMKHRRSALGITVH---QGRI 265 (308)
T ss_dssp CCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEEE---------CCCCSSCCBSCEEEEE---TTEE
T ss_pred CCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCcEEE---------CCCCCCCccceEEEEE---CCEE
Confidence 222211122223333 66777777654 468899988765421 0011111111122222 4566
Q ss_pred EEEEEcC-----CEEEEEecccceEEEE
Q psy710 321 LLLAYET-----GLVVHWDLKLKRAEFR 343 (591)
Q Consensus 321 l~~~~~d-----g~i~iwd~~~~~~~~~ 343 (591)
++.|+.+ ..+.+||+.+.+....
T Consensus 266 ~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 293 (308)
T 1zgk_A 266 YVLGGYDGHTFLDSVECYDPDTDTWSEV 293 (308)
T ss_dssp EEECCBCSSCBCCEEEEEETTTTEEEEE
T ss_pred EEEcCcCCCcccceEEEEcCCCCEEeec
Confidence 6666643 4677888887765543
No 327
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=97.24 E-value=0.13 Score=47.92 Aligned_cols=249 Identities=12% Similarity=0.115 Sum_probs=123.2
Q ss_pred CCcEEEeCCCCcEEEEEeCCCcEEEEcCCCceeEe---e----ccCCcceEEEEEeec---CCEEEEe---cCCCeEEEE
Q psy710 9 QPTAIAFDPIQKLLAIGTKTGSLRLLGRPGVDAHV---R----HETDAAVIQMQFLTN---EGALITA---TADDSLHLW 75 (591)
Q Consensus 9 ~v~~~~~spdg~~la~g~~dg~i~lw~~~~~~~~~---~----~~h~~~v~~l~~sp~---~~~l~s~---~~d~~i~vw 75 (591)
....|+|.|||+++++--..|.|++++..+..... + .........|+|+|+ +.+|+.. ..++.|.-|
T Consensus 33 ~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R~ 112 (347)
T 3das_A 33 SPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIVRM 112 (347)
T ss_dssp SEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEEEE
T ss_pred CceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEEEE
Confidence 45789999999977766548999999865322221 1 234567899999995 3444432 234556556
Q ss_pred eecccC--------ceee-eEEEe-eccceEEEEeeCCceEEEEEeCCCcEEEEEeeeeeeeceecccccccccCCCCCC
Q psy710 76 NFRQKR--------PEIV-HSLKF-QRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHP 145 (591)
Q Consensus 76 ~~~~~~--------~~~~-~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (591)
.+..+. .+.+ ..+.. ....-..|.|.|||.+.++.+..+.. ...+ ........+.. +.+++
T Consensus 113 ~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~-----~~~q---d~~~~~G~IlR-i~~dG 183 (347)
T 3das_A 113 LYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDT-----GLSQ---DRKSLGGKILR-MTPDG 183 (347)
T ss_dssp EBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCG-----GGTT---CTTCSTTCEEE-ECTTS
T ss_pred EeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCC-----cccc---CCCCCCCEEEE-EeCCC
Confidence 655421 1111 12221 11234568999999877765543221 0000 00000000000 00111
Q ss_pred CceeccCCCCcCcceeeeccCCCCceEEEECCCCCEEEEEeC-CC--cEEEe--------CCCCeE--------EEEecc
Q psy710 146 GPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTK-TG--SLRLL--------GRPGVD--------AHVRHE 206 (591)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg--~i~i~--------d~~~~~--------~~~~~~ 206 (591)
.. -..+.+.....+..|+. .+..++|+|++++.++-.. ++ .|.+. -..... ......
T Consensus 184 ~i---p~~nPf~~~~i~a~G~R-Np~Gla~dp~G~L~~~d~g~~~~deln~i~~G~nyGwP~~~g~~~~~~~~~P~~~~~ 259 (347)
T 3das_A 184 EP---APGNPFPGSPVYSYGHR-NVQGLAWDDKQRLFASEFGQDTWDELNAIKPGDNYGWPEAEGKGGGSGFHDPVAQWS 259 (347)
T ss_dssp SB---CTTCSSTTCCEEEBCCS-BCCEEEECTTCCEEEEECCSSSCEEEEEECTTCBCCTTTCCSSCCCTTCCCCSEEEC
T ss_pred Cc---cCCCCCCCCeEEeeCCC-CcceEEECCCCCEEEEecCCCCCceeeEEcCCCEecCCcccCCCCCccccCCcEecC
Confidence 10 00111111234445654 3578999998876554321 22 23321 110000 000111
Q ss_pred -CCCcEEEEEEEcCCceEEEEeCCCcEEEEEccCCCc--ceEEeeeeccccEEEEEecCCCCEEEEEe
Q psy710 207 -TDAAVIQMQFLTNEGALITATADDSLHLWNFRQKRP--EIVHSLKFQRERITYIHLPLQSKWLYVGT 271 (591)
Q Consensus 207 -~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~--~~~~~~~~~~~~v~~~~~sp~~~~l~~~~ 271 (591)
+......++|. ++..++..-..+.|....+..... +....+.+....+..++..|||.++++.+
T Consensus 260 ~~~~ap~G~~~~-~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~pDG~lyv~td 326 (347)
T 3das_A 260 TDEASPSGIAYA-EGSVWMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAGGDKLWLVTS 326 (347)
T ss_dssp TTTCCEEEEEEE-TTEEEEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEEETTEEEEEEC
T ss_pred CCCCCCcceEEE-cCceeeccccCCEEEEEEecCCceecceEEeecCCCCCccEEEECCCCcEEEEEc
Confidence 11356677777 566666666666676666654411 12233444446788999999987655433
No 328
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.21 E-value=0.025 Score=52.63 Aligned_cols=226 Identities=9% Similarity=0.048 Sum_probs=112.3
Q ss_pred EEEEEeCCCcEEEEcCCCceeEe--eccCCcceEEEEEeecCCEEEEecC-----C------CeEEEEeecccCceeeeE
Q psy710 21 LLAIGTKTGSLRLLGRPGVDAHV--RHETDAAVIQMQFLTNEGALITATA-----D------DSLHLWNFRQKRPEIVHS 87 (591)
Q Consensus 21 ~la~g~~dg~i~lw~~~~~~~~~--~~~h~~~v~~l~~sp~~~~l~s~~~-----d------~~i~vw~~~~~~~~~~~~ 87 (591)
+++.|+ ..+.+||.....-.. +..............+++.++.|+. . ..+..||..+.+...+..
T Consensus 7 l~~~GG--~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~ 84 (315)
T 4asc_A 7 IFMISE--EGAVAYDPAANECYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPP 84 (315)
T ss_dssp EEEEET--TEEEEEETTTTEEEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCC
T ss_pred EEEEcC--CceEEECCCCCeEecCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCC
Confidence 455665 568999987544332 2111122233333456777777773 1 126677777654222222
Q ss_pred EEeeccceEEEEeeCCceEEEEEeCC--------CcEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCcc
Q psy710 88 LKFQRERITYIHLPLQSKWLYVGTEK--------GNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPS 159 (591)
Q Consensus 88 ~~~~~~~v~~~~~~~~~~~l~~~~~d--------~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (591)
+.........+. -+++.++.|+.+ ..+.+||..+.+....-. .
T Consensus 85 ~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~---------------------------~ 135 (315)
T 4asc_A 85 LPSPRCLFGLGE--ALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDP---------------------------L 135 (315)
T ss_dssp BSSCEESCEEEE--ETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCC---------------------------C
T ss_pred CCcchhceeEEE--ECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCC---------------------------C
Confidence 211111111122 266777777632 357777777654322110 0
Q ss_pred eeeeccCCCCceEEEECCCCCEEEEEeC------CCcEEEeCCCCeEEEEeccCCC-c-EEEEEEEcCCceEEEEeCCC-
Q psy710 160 KTFRHGFPYQPTAIAFDPIQKLLAIGTK------TGSLRLLGRPGVDAHVRHETDA-A-VIQMQFLTNEGALITATADD- 230 (591)
Q Consensus 160 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~------dg~i~i~d~~~~~~~~~~~~~~-~-v~~~~~~~~~~~l~~~~~d~- 230 (591)
...+.+ .+++. -++++++.|+. -..+.+||..+.+......... . -.+++ .-+++.++.|+.++
T Consensus 136 p~~r~~-----~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~-~~~~~iyv~GG~~~~ 208 (315)
T 4asc_A 136 PYVVYG-----HTVLS-HMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGAT-VHDGRIIVAAGVTDT 208 (315)
T ss_dssp SSCCBS-----CEEEE-ETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEE-EETTEEEEEEEECSS
T ss_pred CCcccc-----eeEEE-ECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEE-EECCEEEEEeccCCC
Confidence 000011 12222 35667777776 2468889988877665433211 1 11222 22677777776654
Q ss_pred ----cEEEEEccCCCcceEEeeeeccccEEEEEecCCCCEEEEEeCCc--------------cEEEEEccCccc
Q psy710 231 ----SLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEKG--------------NIHVVNIESFTL 286 (591)
Q Consensus 231 ----~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg--------------~i~i~d~~~~~~ 286 (591)
.+.+||..+.+...+..+.........+.+ ++++++.|+.++ .+.+||+.+.+-
T Consensus 209 ~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W 280 (315)
T 4asc_A 209 GLTSSAEVYSITDNKWAPFEAFPQERSSLSLVSL--VGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKW 280 (315)
T ss_dssp SEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEE
T ss_pred CccceEEEEECCCCeEEECCCCCCcccceeEEEE--CCEEEEECCccccCcCCccccccccCcEEEecCCCChh
Confidence 478889887633333222222122223333 567777776532 366777776543
No 329
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.21 E-value=0.047 Score=50.77 Aligned_cols=107 Identities=6% Similarity=0.035 Sum_probs=59.2
Q ss_pred CCCEEEEEeCC--------CcEEEeCCCCeEEEEeccCCC-cEEEEEEEcCCceEEEEeC-C-----CcEEEEEccCCCc
Q psy710 178 IQKLLAIGTKT--------GSLRLLGRPGVDAHVRHETDA-AVIQMQFLTNEGALITATA-D-----DSLHLWNFRQKRP 242 (591)
Q Consensus 178 ~~~~l~~~~~d--------g~i~i~d~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~~-d-----~~i~~wd~~~~~~ 242 (591)
++++++.|+.+ ..+.+||..+.+......... .....+..-+++.++.|+. + ..+.+||..+.+.
T Consensus 98 ~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W 177 (315)
T 4asc_A 98 LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLSHMDLVYVIGGKGSDRKCLNKMCVYDPKKFEW 177 (315)
T ss_dssp TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCTTSCBCCCEEEEETTTTEE
T ss_pred CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEEECCEEEEEeCCCCCCcccceEEEEeCCCCeE
Confidence 56667777632 458889988876654432211 1111122236677777765 2 4688999887632
Q ss_pred ceEEeeeeccccEEEEEecCCCCEEEEEeCCc-----cEEEEEccCccc
Q psy710 243 EIVHSLKFQRERITYIHLPLQSKWLYVGTEKG-----NIHVVNIESFTL 286 (591)
Q Consensus 243 ~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg-----~i~i~d~~~~~~ 286 (591)
+.+..+........++.+ ++++++.|+.++ .+.+||+.+.+-
T Consensus 178 ~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W 224 (315)
T 4asc_A 178 KELAPMQTARSLFGATVH--DGRIIVAAGVTDTGLTSSAEVYSITDNKW 224 (315)
T ss_dssp EECCCCSSCCBSCEEEEE--TTEEEEEEEECSSSEEEEEEEEETTTTEE
T ss_pred EECCCCCCchhceEEEEE--CCEEEEEeccCCCCccceEEEEECCCCeE
Confidence 222222211111222233 667777777654 578888877644
No 330
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.20 E-value=0.027 Score=52.23 Aligned_cols=233 Identities=12% Similarity=0.035 Sum_probs=118.3
Q ss_pred eCCCCcEEEEEeC----CCcEEEEcCCCceeEeeccCCcc--eEEEEEeecCCEEEEecC----C-----CeEEEEeecc
Q psy710 15 FDPIQKLLAIGTK----TGSLRLLGRPGVDAHVRHETDAA--VIQMQFLTNEGALITATA----D-----DSLHLWNFRQ 79 (591)
Q Consensus 15 ~spdg~~la~g~~----dg~i~lw~~~~~~~~~~~~h~~~--v~~l~~sp~~~~l~s~~~----d-----~~i~vw~~~~ 79 (591)
..-++.+++.|+. -..+.+||........+..-..+ -.+++ .-+++.++.|+. + ..+.+||..+
T Consensus 21 ~~~~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~-~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~ 99 (308)
T 1zgk_A 21 PKVGRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSGLAGC-VVGGLLYAVGGRNNSPDGNTDSSALDCYNPMT 99 (308)
T ss_dssp CCCCCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEE-EETTEEEEECCEEEETTEEEECCCEEEEETTT
T ss_pred cCCCCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcccccceEE-EECCEEEEECCCcCCCCCCeecceEEEECCCC
Confidence 3446678888874 23688888775544433221110 01122 235667777765 2 3577788776
Q ss_pred cCceeeeEEEeeccceEEEEeeCCceEEEEEeCC-----CcEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCC
Q psy710 80 KRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEK-----GNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDN 154 (591)
Q Consensus 80 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (591)
.+...+..+.........+. -+++.++.|+.+ ..+.+||+.+.+....-..
T Consensus 100 ~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~---------------------- 155 (308)
T 1zgk_A 100 NQWSPCAPMSVPRNRIGVGV--IDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPM---------------------- 155 (308)
T ss_dssp TEEEECCCCSSCCBTCEEEE--ETTEEEEECCEETTEECCCEEEEETTTTEEEECCCC----------------------
T ss_pred CeEeECCCCCcCccccEEEE--ECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCC----------------------
Confidence 64322222221111122222 267777777643 3567777766443221100
Q ss_pred CcCcceeeeccCCCCceEEEECCCCCEEEEEeCC-----CcEEEeCCCCeEEEEeccCC--CcEEEEEEEcCCceEEEEe
Q psy710 155 PLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTKT-----GSLRLLGRPGVDAHVRHETD--AAVIQMQFLTNEGALITAT 227 (591)
Q Consensus 155 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~--~~v~~~~~~~~~~~l~~~~ 227 (591)
...+.+| ..+.+ ++++++.|+.+ ..+..||..+.+........ ..-.+++.. +++.++.|+
T Consensus 156 -----p~~r~~~----~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG 223 (308)
T 1zgk_A 156 -----LTRRIGV----GVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL-HNCIYAAGG 223 (308)
T ss_dssp -----SSCCBSC----EEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TTEEEEECC
T ss_pred -----Cccccce----EEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE-CCEEEEEeC
Confidence 0000111 22222 56777777654 45888998877766443221 111122222 677777776
Q ss_pred CC-----CcEEEEEccCCCcceEEeeeeccccEEEEEecCCCCEEEEEeCC-----ccEEEEEccCccc
Q psy710 228 AD-----DSLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEK-----GNIHVVNIESFTL 286 (591)
Q Consensus 228 ~d-----~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d-----g~i~i~d~~~~~~ 286 (591)
.+ ..+.+||+.+.+...+..+.........+.+ ++++++.|+.+ ..+.+||+.+.+-
T Consensus 224 ~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 290 (308)
T 1zgk_A 224 YDGQDQLNSVERYDVETETWTFVAPMKHRRSALGITVH--QGRIYVLGGYDGHTFLDSVECYDPDTDTW 290 (308)
T ss_dssp BCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTEE
T ss_pred CCCCCccceEEEEeCCCCcEEECCCCCCCccceEEEEE--CCEEEEEcCcCCCcccceEEEEcCCCCEE
Confidence 54 5689999987632222222221112222223 66777777654 3577888876544
No 331
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=97.00 E-value=0.31 Score=47.81 Aligned_cols=130 Identities=8% Similarity=0.046 Sum_probs=80.2
Q ss_pred ccEEEEEecCCCCEEEEEeC-CccEEEEEccCcccc--ceeeehhhhccccccCCCCCeEEEecCCCCCCeEEEEEcCCE
Q psy710 253 ERITYIHLPLQSKWLYVGTE-KGNIHVVNIESFTLS--GYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKLLLAYETGL 329 (591)
Q Consensus 253 ~~v~~~~~sp~~~~l~~~~~-dg~i~i~d~~~~~~~--~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~ 329 (591)
.....+.++|||+++++++. +.++.++|.+..... ...+.....+..... -.-.....+|.+ +|+-..+-.-|..
T Consensus 323 ksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~GlGPlHt~Fd~-~G~aYTtlfidSq 400 (638)
T 3sbq_A 323 KNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LGLGPLHTTFDG-RGNAYTTLFIDSQ 400 (638)
T ss_dssp SSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CCSCEEEEEECS-SSEEEEEETTTTE
T ss_pred CCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-CCCcccEEEECC-CCceEeeeeecce
Confidence 34457788999999987664 568999998863221 001111122221222 234567789999 8855555667999
Q ss_pred EEEEecccc----------eEEEEeccCCCeeEEEE------eecCCEEEEEe---cCCc----------EEEEecCCCC
Q psy710 330 VVHWDLKLK----------RAEFRWQCSEPIKSVCW------HYEGKQFLCSH---TDGT----------ISTWAVRPLA 380 (591)
Q Consensus 330 i~iwd~~~~----------~~~~~~~~~~~v~~~~~------sp~g~~l~s~~---~dg~----------i~vwd~~~~~ 380 (591)
|.-|++... .++..+.-.-.+-.+.- .|||++|++.. .|.. -.+.|+. +
T Consensus 401 vvkWni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~lnK~skdrfl~vGpl~pen~QlidIs--G 478 (638)
T 3sbq_A 401 VVKWNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALSKFSKDRFLPVGPLHPENDQLIDIS--G 478 (638)
T ss_dssp EEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEESCCTTSSCCCSSSCCEEEEEEECS--S
T ss_pred EEEEeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEecccccccCcCCCCCCCCcceeEecC--C
Confidence 999999763 45555553444444444 57999999885 4443 3677776 4
Q ss_pred Cceeee
Q psy710 381 KPVSVN 386 (591)
Q Consensus 381 ~~~~~~ 386 (591)
..++.+
T Consensus 479 dkM~lv 484 (638)
T 3sbq_A 479 DEMKLV 484 (638)
T ss_dssp SSCEEE
T ss_pred CceEEE
Confidence 444433
No 332
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=96.97 E-value=0.051 Score=49.95 Aligned_cols=181 Identities=10% Similarity=0.064 Sum_probs=104.3
Q ss_pred CCCCCEEEEEe--CCCcEEEeCCCCeEEEEeccCCCcEEEEEEEcCCceEEEEeCC--------------CcEEEEEccC
Q psy710 176 DPIQKLLAIGT--KTGSLRLLGRPGVDAHVRHETDAAVIQMQFLTNEGALITATAD--------------DSLHLWNFRQ 239 (591)
Q Consensus 176 ~~~~~~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--------------~~i~~wd~~~ 239 (591)
++++..++... .++.|+..+............ . +--+++++++|+..... ..|+..++..
T Consensus 22 ~~~g~~iy~~n~~d~~~ly~~~~dg~~~~~l~~~--~--~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg 97 (302)
T 3s25_A 22 CESDGEVFFSNTNDNGRLYAMNIDGSNIHKLSND--T--AMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNG 97 (302)
T ss_dssp EEETTEEEEEEGGGTTEEEEEETTSCSCEEEEEE--E--EEEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTS
T ss_pred EEeCCEEEEEeCCCCceEEEEcCCCCCCEEccCC--c--eeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCC
Confidence 35666666654 256677777665544433322 2 24557899988877543 3566677766
Q ss_pred CCcceEEeeeeccccEEEEEecCCCCEEEEEe--C--CccEEEEEccCccccceeeehhhhccccccCCCCCeEEEecCC
Q psy710 240 KRPEIVHSLKFQRERITYIHLPLQSKWLYVGT--E--KGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNP 315 (591)
Q Consensus 240 ~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~--~--dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp 315 (591)
.+.+.+.. .. +..+++++++|+... . +..|+..++...... .+..+.. .+++|
T Consensus 98 ~~~~~l~~-----~~--~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~------------~lt~~~~----~~~~~ 154 (302)
T 3s25_A 98 HGSTVLDP-----DP--CIYASLIGNYIYYLHYDTQTATSLYRIRIDGEEKK------------KIKNHYL----FTCNT 154 (302)
T ss_dssp CCCEEEEC-----SC--EEEEEEETTEEEEEEESSSSCEEEEEEETTSCCCE------------EEESSCC----CCSEE
T ss_pred CcceEeec-----CC--ccEEEEeCCEEEEEeecCCCCceEEEEECCCCCeE------------EEeCCCc----eEeeE
Confidence 63222222 11 125677888888765 3 345655666543321 2222222 45778
Q ss_pred CCCCeEEEEEc-CCEEEEEecccceEEEEeccCCCeeEEEEeecCCEEEEEecCCcEEEEecCCCCCceeeec
Q psy710 316 LDPSKLLLAYE-TGLVVHWDLKLKRAEFRWQCSEPIKSVCWHYEGKQFLCSHTDGTISTWAVRPLAKPVSVNQ 387 (591)
Q Consensus 316 ~~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~g~~l~s~~~dg~i~vwd~~~~~~~~~~~~ 387 (591)
+++.|+..+. ...|..-++..+.....+. +... ..++|++.+|+-...++.-+|+.+...+.....+.
T Consensus 155 -~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~--~~~~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~~~~Lt 223 (302)
T 3s25_A 155 -SDRYFYYNNPKNGQLYRYDTASQSEALFYD--CNCY-KPVVLDDTNVYYMDVNRDNAIVHVNINNPNPVVLT 223 (302)
T ss_dssp -ETTEEEEECTTTCCEEEEETTTTEEEEEEC--SCEE-EEEEEETTEEEEEEGGGTTEEEEECSSSCCCEECS
T ss_pred -ECCEEEEEeCCCceEEEEECCCCCEEEEeC--CCcc-ceeeecCCEEEEEEcCCCcEEEEEECCCCCeEEEe
Confidence 8888887665 6788888888776655544 2232 34679999988776543234444443354455554
No 333
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=96.93 E-value=0.14 Score=47.63 Aligned_cols=107 Identities=8% Similarity=0.032 Sum_probs=58.5
Q ss_pred CCCEEEEEeCC-------CcEEEeCCCCeEEEEeccCCCc-EEEEEEEcCCceEEEEeC------CCcEEEEEccCCCcc
Q psy710 178 IQKLLAIGTKT-------GSLRLLGRPGVDAHVRHETDAA-VIQMQFLTNEGALITATA------DDSLHLWNFRQKRPE 243 (591)
Q Consensus 178 ~~~~l~~~~~d-------g~i~i~d~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~~~~~------d~~i~~wd~~~~~~~ 243 (591)
++++++.|+.+ ..+.+||..+.+.........+ ....+...+++.++.|+. -..+.+||..+.+..
T Consensus 109 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~ 188 (318)
T 2woz_A 109 DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVISHNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWK 188 (318)
T ss_dssp TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEEETTEEEEECCEESSSCBCCCEEEEETTTTEEE
T ss_pred CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEEECCEEEEEcCCCCCCCccceEEEEcCCCCEEE
Confidence 56777777754 3477889887776654332111 111122246777677653 245889999877333
Q ss_pred eEEeeeeccccEEEEEecCCCCEEEEEeCC-----ccEEEEEccCccc
Q psy710 244 IVHSLKFQRERITYIHLPLQSKWLYVGTEK-----GNIHVVNIESFTL 286 (591)
Q Consensus 244 ~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d-----g~i~i~d~~~~~~ 286 (591)
.+..+.........+.+ ++++++.|+.+ ..+.+||+.+.+-
T Consensus 189 ~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W 234 (318)
T 2woz_A 189 DLAPMKTPRSMFGVAIH--KGKIVIAGGVTEDGLSASVEAFDLKTNKW 234 (318)
T ss_dssp EECCCSSCCBSCEEEEE--TTEEEEEEEEETTEEEEEEEEEETTTCCE
T ss_pred ECCCCCCCcccceEEEE--CCEEEEEcCcCCCCccceEEEEECCCCeE
Confidence 33222221121222333 66777777643 3577888877543
No 334
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=96.92 E-value=0.054 Score=50.41 Aligned_cols=227 Identities=9% Similarity=0.036 Sum_probs=110.4
Q ss_pred cEEEEEeCCCcEEEEcCCCceeEee--ccCCcceEEEEEeecCCEEEEecC----CC-------eEEEEeecccCceeee
Q psy710 20 KLLAIGTKTGSLRLLGRPGVDAHVR--HETDAAVIQMQFLTNEGALITATA----DD-------SLHLWNFRQKRPEIVH 86 (591)
Q Consensus 20 ~~la~g~~dg~i~lw~~~~~~~~~~--~~h~~~v~~l~~sp~~~~l~s~~~----d~-------~i~vw~~~~~~~~~~~ 86 (591)
.+++.|+. .+..||......... ..............++..++.|+. ++ .+..||..+.+...+.
T Consensus 17 ~i~~~GG~--~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~ 94 (318)
T 2woz_A 17 LILLVNDT--AAVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLP 94 (318)
T ss_dssp EEEEECSS--EEEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECS
T ss_pred hhhhcccc--ceEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECC
Confidence 45556653 488888774443322 111112222333456777778773 12 1666777665422222
Q ss_pred EEEeeccceEEEEeeCCceEEEEEeCC-------CcEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCcc
Q psy710 87 SLKFQRERITYIHLPLQSKWLYVGTEK-------GNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPS 159 (591)
Q Consensus 87 ~~~~~~~~v~~~~~~~~~~~l~~~~~d-------~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (591)
.+.........+. -+++.++.|+.+ ..+.+||..+.+....-. .
T Consensus 95 ~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~---------------------------~ 145 (318)
T 2woz_A 95 PLPSARCLFGLGE--VDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKN---------------------------L 145 (318)
T ss_dssp CBSSCBCSCEEEE--ETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECC---------------------------C
T ss_pred CCCccccccceEE--ECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCC---------------------------C
Confidence 2221111111222 267777777754 246667766544332110 0
Q ss_pred eeeeccCCCCceEEEECCCCCEEEEEeC------CCcEEEeCCCCeEEEEeccCCC--cEEEEEEEcCCceEEEEeCC--
Q psy710 160 KTFRHGFPYQPTAIAFDPIQKLLAIGTK------TGSLRLLGRPGVDAHVRHETDA--AVIQMQFLTNEGALITATAD-- 229 (591)
Q Consensus 160 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~------dg~i~i~d~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~~~~~d-- 229 (591)
...+.+| +++. .++++++.|+. ...+.+||..+.+......... .-.+++. -+++.++.|+.+
T Consensus 146 p~~r~~~-----~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~ 218 (318)
T 2woz_A 146 PIKVYGH-----NVIS-HNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAI-HKGKIVIAGGVTED 218 (318)
T ss_dssp SSCEESC-----EEEE-ETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEEEEEETT
T ss_pred CCccccc-----EEEE-ECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEE-ECCEEEEEcCcCCC
Confidence 0001111 2222 35667777764 2458899998877665432211 1112222 266777777643
Q ss_pred ---CcEEEEEccCCCcceEEeeeeccccEEEEEecCCCCEEEEEeCC--------------ccEEEEEccCccc
Q psy710 230 ---DSLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEK--------------GNIHVVNIESFTL 286 (591)
Q Consensus 230 ---~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d--------------g~i~i~d~~~~~~ 286 (591)
..+.+||+.+.+...+..+.........+.+ ++++++.|+.+ ..+.+||+.+.+-
T Consensus 219 ~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W 290 (318)
T 2woz_A 219 GLSASVEAFDLKTNKWEVMTEFPQERSSISLVSL--AGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEW 290 (318)
T ss_dssp EEEEEEEEEETTTCCEEECCCCSSCCBSCEEEEE--TTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTEE
T ss_pred CccceEEEEECCCCeEEECCCCCCcccceEEEEE--CCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCEe
Confidence 3477889887743333222222112222222 56667776643 3577777776543
No 335
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.77 E-value=0.07 Score=50.52 Aligned_cols=151 Identities=15% Similarity=0.161 Sum_probs=92.0
Q ss_pred cCCceEEEEeCCCcEEEEEccCCCcceEEeeeec----cccEEEEEecCCCCEEEEEeCCccEEEEEccCcccccee---
Q psy710 218 TNEGALITATADDSLHLWNFRQKRPEIVHSLKFQ----RERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYI--- 290 (591)
Q Consensus 218 ~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~----~~~v~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~--- 290 (591)
.++..++.+- ++.||.-++.... ..+.+... -..+..+..+|+|++||..+ +..|.|..+..+......
T Consensus 30 ~n~t~i~~a~-~n~iR~~~i~~~~--~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~ 105 (452)
T 3pbp_A 30 QNGTRIVFIQ-DNIIRWYNVLTDS--LYHSLNFSRHLVLDDTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVSI 105 (452)
T ss_dssp TTTTEEEEEE-TTEEEEEETTTCS--SCEEEECTTTCCCCTTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHHH
T ss_pred cCCCEEEEEE-CCEEEEEECCCCC--cceEEecCcccccCceeEEEECCCCCEEEEec-CCeEEEEEecCccccCccccc
Confidence 3555555543 3677777776442 22333322 23577899999999999876 458999888843211100
Q ss_pred ---ee-hhhhccccccCCCCCeEEEecCCC--CCCeEEEEEcCCEEEEEecccce--EEEEe-------c---cCCCeeE
Q psy710 291 ---IN-WNKAIDVCMKTHPGPIIHLSDNPL--DPSKLLLAYETGLVVHWDLKLKR--AEFRW-------Q---CSEPIKS 352 (591)
Q Consensus 291 ---~~-~~~~~~~~~~~~~~~v~~~~~sp~--~~~~l~~~~~dg~i~iwd~~~~~--~~~~~-------~---~~~~v~~ 352 (591)
+. ....+.........+|..+.|+|. .+..|++-..|+.||+||+.... .. .+ + ....|.+
T Consensus 106 ~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S 184 (452)
T 3pbp_A 106 QDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITD 184 (452)
T ss_dssp HHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEE
T ss_pred ccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEE
Confidence 00 000000011113678999999994 34589999999999999998521 11 12 1 2367889
Q ss_pred EEEeecCCEEEEEe--cCCcEEE
Q psy710 353 VCWHYEGKQFLCSH--TDGTIST 373 (591)
Q Consensus 353 ~~~sp~g~~l~s~~--~dg~i~v 373 (591)
++|.+++-.|...+ ..|.|+-
T Consensus 185 ~~Fg~~~lTLYvl~~t~~GDIYA 207 (452)
T 3pbp_A 185 LEFSKDGLTLYCLNTTEGGDIFA 207 (452)
T ss_dssp EEECTTSSCEEEEECTTSCEEEE
T ss_pred EEEcCCCcEEEEEecCCCCCEEE
Confidence 99999887666644 7787654
No 336
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.77 E-value=0.042 Score=51.98 Aligned_cols=109 Identities=14% Similarity=0.225 Sum_probs=75.6
Q ss_pred CceEEEECCCCCEEEEEeCCCcEEEeCCCCe-------------EE--EEecc----CCCcEEEEEEEcCC---ceEEEE
Q psy710 169 QPTAIAFDPIQKLLAIGTKTGSLRLLGRPGV-------------DA--HVRHE----TDAAVIQMQFLTNE---GALITA 226 (591)
Q Consensus 169 ~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~-------------~~--~~~~~----~~~~v~~~~~~~~~---~~l~~~ 226 (591)
.+..+..+|+|++||..+. ..|.+..++.. ++ ..... ...+|..+.|+|-+ ..|++-
T Consensus 67 ~i~qlvlSpsG~lLAl~g~-~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVL 145 (452)
T 3pbp_A 67 DTFHVISSTSGDLLCLFND-NEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVL 145 (452)
T ss_dssp TTCEEEECTTSSEEEEECS-SEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEE
T ss_pred ceeEEEECCCCCEEEEecC-CeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEE
Confidence 5678999999999998864 46777655411 11 11111 24689999999954 589999
Q ss_pred eCCCcEEEEEccCCCcceEEeee---------eccccEEEEEecCCCCEEEEEe--CCccEEEE
Q psy710 227 TADDSLHLWNFRQKRPEIVHSLK---------FQRERITYIHLPLQSKWLYVGT--EKGNIHVV 279 (591)
Q Consensus 227 ~~d~~i~~wd~~~~~~~~~~~~~---------~~~~~v~~~~~sp~~~~l~~~~--~dg~i~i~ 279 (591)
..|+.|++||+.....++. .+. .....|.+++|.+++-.|++.+ +.|.|+-.
T Consensus 146 tsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 146 KEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp ETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEEECTTSSCEEEEECTTSCEEEEE
T ss_pred ecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEEEEcCCCcEEEEEecCCCCCEEEE
Confidence 9999999999986322233 222 1225688999999888787755 77877653
No 337
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.68 E-value=0.016 Score=49.30 Aligned_cols=104 Identities=10% Similarity=-0.006 Sum_probs=63.1
Q ss_pred CCCcEEEeCCCCcEEEEEeCCCcEEEEcCCCceeEeeccCCcc--------eEEEEEeecCCEEEEecCCCeEEEEeecc
Q psy710 8 YQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGVDAHVRHETDAA--------VIQMQFLTNEGALITATADDSLHLWNFRQ 79 (591)
Q Consensus 8 ~~v~~~~~spdg~~la~g~~dg~i~lw~~~~~~~~~~~~h~~~--------v~~l~~sp~~~~l~s~~~d~~i~vw~~~~ 79 (591)
..++.++|+|+|.+.|+ .+|.+.-.+.....-....+-... -.++.|.|+|.+.++ .||.|.-++-.+
T Consensus 41 ~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~ 116 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQ 116 (236)
T ss_dssp TTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCC
T ss_pred ccceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe--CCCEEEEeCCCc
Confidence 47889999999998777 677766655432111111111122 478899999987666 568887776533
Q ss_pred cCce-ee---eEE-EeeccceEEEEeeCCceEEEEEeCCCcEE
Q psy710 80 KRPE-IV---HSL-KFQRERITYIHLPLQSKWLYVGTEKGNIH 117 (591)
Q Consensus 80 ~~~~-~~---~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~ 117 (591)
.... -+ ..+ ...=..+..+.|.|+|.+.++. |+.++
T Consensus 117 ~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~ly 157 (236)
T 1tl2_A 117 SDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFY 157 (236)
T ss_dssp STTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEE
T ss_pred CCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEE
Confidence 2111 00 011 1111467899999999887777 66644
No 338
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=96.66 E-value=0.084 Score=50.07 Aligned_cols=108 Identities=12% Similarity=0.093 Sum_probs=54.6
Q ss_pred CCCEEEEEeC------CCcEEEeCC--CCeEEEEeccC---CCcEEEEEEEcCCceEEEEeCC-----------------
Q psy710 178 IQKLLAIGTK------TGSLRLLGR--PGVDAHVRHET---DAAVIQMQFLTNEGALITATAD----------------- 229 (591)
Q Consensus 178 ~~~~l~~~~~------dg~i~i~d~--~~~~~~~~~~~---~~~v~~~~~~~~~~~l~~~~~d----------------- 229 (591)
++++++.|+. ...+..||+ .+......... .......+...+++.++.|+.+
T Consensus 200 ~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~ 279 (357)
T 2uvk_A 200 GDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHE 279 (357)
T ss_dssp TTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTT
T ss_pred CCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCcccccceEEEECCEEEEEcCccccCCcccccccceeccc
Confidence 5566666653 345777776 55555443221 1111111233367777777632
Q ss_pred -----CcEEEEEccCCCcceEEeeeeccccEEEEEecCCCCEEEEEeCCc------cEEEEEccCcccc
Q psy710 230 -----DSLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEKG------NIHVVNIESFTLS 287 (591)
Q Consensus 230 -----~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg------~i~i~d~~~~~~~ 287 (591)
..+.+||+.+.+...+..+......-.++. .++++++.|+.++ .+.++++++.+..
T Consensus 280 ~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~~v~~l~~~~~~~~ 346 (357)
T 2uvk_A 280 GLKKSYSTDIHLWHNGKWDKSGELSQGRAYGVSLP--WNNSLLIIGGETAGGKAVTDSVLITVKDNKVT 346 (357)
T ss_dssp TCCCEECCEEEECC---CEEEEECSSCCBSSEEEE--ETTEEEEEEEECGGGCEEEEEEEEEC-CCSCE
T ss_pred cccceeeEEEEecCCCceeeCCCCCCCcccceeEE--eCCEEEEEeeeCCCCCEeeeEEEEEEcCcEeE
Confidence 257889998875555544443222222333 3678888888653 3556677776653
No 339
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=96.44 E-value=0.26 Score=46.62 Aligned_cols=193 Identities=8% Similarity=-0.035 Sum_probs=95.4
Q ss_pred CCCEEEEEeC-C---------CcEEEeCCCCeEEEEeccCC--CcEEEEEEEcCCceEEEEeCC----------------
Q psy710 178 IQKLLAIGTK-T---------GSLRLLGRPGVDAHVRHETD--AAVIQMQFLTNEGALITATAD---------------- 229 (591)
Q Consensus 178 ~~~~l~~~~~-d---------g~i~i~d~~~~~~~~~~~~~--~~v~~~~~~~~~~~l~~~~~d---------------- 229 (591)
++++++.|+. + ..+.+||..+.+........ ......+...+++.++.|+.+
T Consensus 65 ~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~ 144 (357)
T 2uvk_A 65 DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGK 144 (357)
T ss_dssp TTEEEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCCCSSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTT
T ss_pred CCEEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCCCcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCC
Confidence 5667777765 2 46888999887766543321 111111222577777888754
Q ss_pred -----------------------CcEEEEEccCCCcceEEeeeeccccEEEEEecCCCCEEEEEeCC------ccEEEEE
Q psy710 230 -----------------------DSLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEK------GNIHVVN 280 (591)
Q Consensus 230 -----------------------~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d------g~i~i~d 280 (591)
..+.+||..+...+.+..+......-.+++. -++++++.|+.+ ..+..||
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~v~~~d 223 (357)
T 2uvk_A 145 DSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYAGESPWYGTAGAAVVN-KGDKTWLINGEAKPGLRTDAVFELD 223 (357)
T ss_dssp CHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTTEEEEEEECSSCCCBSCEEEE-ETTEEEEECCEEETTEECCCEEEEE
T ss_pred cccchhhhhhhhccccccccCCcccEEEEeCCCCcEEECCCCCCCCcccccEEE-ECCEEEEEeeecCCCcccCceEEEE
Confidence 5788999987744444333221111012222 256666666542 3567777
Q ss_pred c--cCccccceeeehhhhccccccCCCC--CeEEEecCCCCCCeEEEEEcC----------------------CEEEEEe
Q psy710 281 I--ESFTLSGYIINWNKAIDVCMKTHPG--PIIHLSDNPLDPSKLLLAYET----------------------GLVVHWD 334 (591)
Q Consensus 281 ~--~~~~~~~~~~~~~~~~~~~~~~~~~--~v~~~~~sp~~~~~l~~~~~d----------------------g~i~iwd 334 (591)
+ .+.+-. .. ..+..... ....+.+ ++..++.|+.+ ..+.+||
T Consensus 224 ~d~~~~~W~-------~~--~~~~~~~~~~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd 291 (357)
T 2uvk_A 224 FTGNNLKWN-------KL--APVSSPDGVAGGFAGIS---NDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHL 291 (357)
T ss_dssp CC---CEEE-------EC--CCSSTTTCCBSCEEEEE---TTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEE
T ss_pred ecCCCCcEE-------ec--CCCCCCcccccceEEEE---CCEEEEEcCccccCCcccccccceeccccccceeeEEEEe
Confidence 6 333221 10 01111111 1112222 45666666532 2577899
Q ss_pred cccceEEEEecc-CCCeeEEEEeecCCEEEEEecCC------cEEEEecCCCCCcee
Q psy710 335 LKLKRAEFRWQC-SEPIKSVCWHYEGKQFLCSHTDG------TISTWAVRPLAKPVS 384 (591)
Q Consensus 335 ~~~~~~~~~~~~-~~~v~~~~~sp~g~~l~s~~~dg------~i~vwd~~~~~~~~~ 384 (591)
+.+.+....-.. .......+..-++++++.|+.++ .|.+++++ +++.+.
T Consensus 292 ~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~l~~~-~~~~~~ 347 (357)
T 2uvk_A 292 WHNGKWDKSGELSQGRAYGVSLPWNNSLLIIGGETAGGKAVTDSVLITVK-DNKVTV 347 (357)
T ss_dssp CC---CEEEEECSSCCBSSEEEEETTEEEEEEEECGGGCEEEEEEEEEC--CCSCEE
T ss_pred cCCCceeeCCCCCCCcccceeEEeCCEEEEEeeeCCCCCEeeeEEEEEEc-CcEeEe
Confidence 988765544321 11222233345888888888653 35666887 455443
No 340
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.37 E-value=0.026 Score=48.10 Aligned_cols=150 Identities=9% Similarity=-0.057 Sum_probs=82.9
Q ss_pred CCceEEEECCCCCEEEEEeCCCcEEEeCCCCeE--------EEEeccCCCcEEEEEEEcCCceEEEEeCCCcEEEEEccC
Q psy710 168 YQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGVD--------AHVRHETDAAVIQMQFLTNEGALITATADDSLHLWNFRQ 239 (591)
Q Consensus 168 ~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~--------~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~ 239 (591)
..+..++|+|++.+.++ .+|.++-.+..+.. .......-.....+.|.|+|.+.++ .||.|+-++..+
T Consensus 41 ~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~ 116 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQ 116 (236)
T ss_dssp TTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCC
T ss_pred ccceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe--CCCEEEEeCCCc
Confidence 35789999999987777 78888877764411 1111111122578999999976666 569887776533
Q ss_pred CCcce-----EEeeeeccccEEEEEecCCCCEEEEEeCCccEEEEEccCccccceeeehhhhccccccCCCCCeEEEecC
Q psy710 240 KRPEI-----VHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDN 314 (591)
Q Consensus 240 ~~~~~-----~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s 314 (591)
..... ...-...=..+..+.+.|+|.+.++. |+.++-....+.... .|.......-...-..-.-+.|.
T Consensus 117 ~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~~~P~~~~~----~wl~~~~~~g~~g~~~yr~l~f~ 190 (236)
T 1tl2_A 117 SDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKALPPVSNQD----NWLARATKIGQGGWDTFKFLFFS 190 (236)
T ss_dssp STTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEECCCSSTTC----CHHHHCEEEESSSGGGEEEEEEC
T ss_pred CCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEecCCCCCCCc----ccccccceeccCCcceEEEEEEC
Confidence 21110 11111112468999999999977766 777543322221111 11100000111222234446688
Q ss_pred CCCCCeEEEEEcCCEE
Q psy710 315 PLDPSKLLLAYETGLV 330 (591)
Q Consensus 315 p~~~~~l~~~~~dg~i 330 (591)
+ ++.+.++. ++.+
T Consensus 191 ~-~G~l~~v~--~g~~ 203 (236)
T 1tl2_A 191 S-VGTLFGVQ--GGKF 203 (236)
T ss_dssp T-TSCEEEEE--TTEE
T ss_pred C-CCcEEEEe--CCeE
Confidence 8 77766665 6644
No 341
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=96.24 E-value=0.27 Score=48.20 Aligned_cols=111 Identities=10% Similarity=0.001 Sum_probs=62.6
Q ss_pred cEEEEEEEcCCceEEEEeCCCcEEEEEccCCCcceEEeeee------ccccEEEEEecCC---CCEEEEEeC--------
Q psy710 210 AVIQMQFLTNEGALITATADDSLHLWNFRQKRPEIVHSLKF------QRERITYIHLPLQ---SKWLYVGTE-------- 272 (591)
Q Consensus 210 ~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~------~~~~v~~~~~sp~---~~~l~~~~~-------- 272 (591)
....|+|.|+|+++++-...+.|++++...+....+..+.. .......++|+|+ +..|++...
T Consensus 28 ~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~~ 107 (454)
T 1cru_A 28 KPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKSTD 107 (454)
T ss_dssp SEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC--
T ss_pred CceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCCc
Confidence 56799999999866665443468888765443233333321 2356779999996 555655442
Q ss_pred -----CccEEEEEccCc--cccceeeehhhhccccccCCCCCeEEEecCCCCCCeEEEEE
Q psy710 273 -----KGNIHVVNIESF--TLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKLLLAY 325 (591)
Q Consensus 273 -----dg~i~i~d~~~~--~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~ 325 (591)
...|.-|++... ++......+ .............|+|.| |+.+.++.+
T Consensus 108 ~~~~~~~~v~r~~~~~~~~~~~~~~~i~----~~~p~~~~H~~~~l~f~p-DG~Lyv~~G 162 (454)
T 1cru_A 108 KELPNQTIIRRYTYNKSTDTLEKPVDLL----AGLPSSKDHQSGRLVIGP-DQKIYYTIG 162 (454)
T ss_dssp CCSCEEEEEEEEEEETTTTEEEEEEEEE----EEECCCSSCCEEEEEECT-TSCEEEEEC
T ss_pred cccccccEEEEEEECCCCCCcCCcEEEE----EcCCCCCCCCCCeEeECC-CCeEEEEEC
Confidence 235666665432 111111100 001111123478999999 998776644
No 342
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=96.22 E-value=0.055 Score=50.22 Aligned_cols=198 Identities=11% Similarity=0.078 Sum_probs=100.3
Q ss_pred ceEEEEEeCCCcEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCCCCEEE
Q psy710 104 SKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLA 183 (591)
Q Consensus 104 ~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 183 (591)
+..+++++.||.|+-+|..+|+.+..+.... ..+. ... .... . ..++..++
T Consensus 10 ~~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~--~~p~-------------------~~~--~~~~-~-----~~~~~~~v 60 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRNGHIIWSIEPEN--FQPL-------------------IEI--QEPS-R-----LETYETLI 60 (339)
T ss_dssp EEEEEEEETTSCEEEEETTTTEEEEEECGGG--SCCS-------------------EEC--CCSC-T-----TTSSEEEE
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEecCCc--cCCc-------------------EEe--cCCc-c-----ccCCcEEE
Confidence 4578889999999999999998887765320 0000 000 0000 0 01333333
Q ss_pred EE-eCCCcEEEeCCCCeEEEEeccC-----CCcEEE---EEE-----EcCCceEEEEeCCCcEEEEEccCCCcceEEeee
Q psy710 184 IG-TKTGSLRLLGRPGVDAHVRHET-----DAAVIQ---MQF-----LTNEGALITATADDSLHLWNFRQKRPEIVHSLK 249 (591)
Q Consensus 184 ~~-~~dg~i~i~d~~~~~~~~~~~~-----~~~v~~---~~~-----~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~ 249 (591)
.. +.||.++.++..++........ ..++.. ... ...+..+++++.++.+...|++++ +.+..+.
T Consensus 61 v~p~~dG~l~a~~~~~G~~~~~~~~~~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG--~~~W~~~ 138 (339)
T 2be1_A 61 IEPFGDGNIYYFNAHQGLQKLPLSIRQLVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNG--EIISAFG 138 (339)
T ss_dssp ECCSTTTEEEEEETTTEEEEEEEEHHHHHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTC--CEEEEES
T ss_pred EEECCCCEEEEEECCCCcEEeeeccccceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCC--cEEEEEe
Confidence 33 5788898888877654422211 112221 000 014567889999999999999999 5666664
Q ss_pred ecc--cc-----EEEEEec-----CCCCEEEEEeCCccEEEEEccCccccceeeehhhhccccccCC--CCCe-EEEecC
Q psy710 250 FQR--ER-----ITYIHLP-----LQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTH--PGPI-IHLSDN 314 (591)
Q Consensus 250 ~~~--~~-----v~~~~~s-----p~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~--~~~v-~~~~~s 314 (591)
... .. ..|.... ..+..++.+..+..+.+.+ ++++. |..... ..... ...+ .+-..+
T Consensus 139 ~~~~~~~~~~~~e~~~~~~d~~~d~~~~~v~ig~~~y~v~~~~-~sG~~------W~~~~s-~~~~~~~~~~~~~~~~~s 210 (339)
T 2be1_A 139 PGSKNGYFGSQSVDCSPEEKIKLQECENMIVIGKTIFELGIHS-YDGAS------YNVTYS-TWQQNVLDVPLALQNTFS 210 (339)
T ss_dssp TTCBCC--------------------CCEEEEEEEEEECEECC-TTSCC------CCCEEE-EEECCTTTHHHHTTCSSC
T ss_pred cCCCcccccccccccccccccccccCCCeEEEecceEEEEEEC-CCCCe------EEEecc-cccccccccccccccccc
Confidence 321 10 1111110 1235677777776666655 33321 111000 00000 0000 000112
Q ss_pred CCCCCeEEEEEcCCEEEEEecccceEEE
Q psy710 315 PLDPSKLLLAYETGLVVHWDLKLKRAEF 342 (591)
Q Consensus 315 p~~~~~l~~~~~dg~i~iwd~~~~~~~~ 342 (591)
. |+.+ +.++.||.|.-+|..+++.+.
T Consensus 211 ~-Dg~~-~~~~~dg~v~A~d~~~G~~~W 236 (339)
T 2be1_A 211 K-DGMC-IAPFRDKSLLASDLDFRIARW 236 (339)
T ss_dssp S-SSCC-EEEETTTEEEEECSTTCCEEE
T ss_pred c-CCcE-EEECCCCEEEEEECCCCcEEE
Confidence 2 4555 446788888888888777665
No 343
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=96.18 E-value=0.34 Score=50.53 Aligned_cols=196 Identities=13% Similarity=0.107 Sum_probs=105.8
Q ss_pred ecCCEEEEecCC----CeEEEEeecccCceeee-EEE---eeccc-eEEEEeeC-CceEEEEEeCCC------cEEEEEe
Q psy710 58 TNEGALITATAD----DSLHLWNFRQKRPEIVH-SLK---FQRER-ITYIHLPL-QSKWLYVGTEKG------NIHVVNI 121 (591)
Q Consensus 58 p~~~~l~s~~~d----~~i~vw~~~~~~~~~~~-~~~---~~~~~-v~~~~~~~-~~~~l~~~~~d~------~i~vwd~ 121 (591)
.++..++.|+.+ ..+.+||..+++...+. .+. ..... -.+++..+ +++.++.|+.++ .+.+||.
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence 456677777753 46788888877533332 110 01111 12233333 778888887532 4677777
Q ss_pred eeeeeeceecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCCCCEEEEEeCCC--cEEEeCCCCe
Q psy710 122 ESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTKTG--SLRLLGRPGV 199 (591)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg--~i~i~d~~~~ 199 (591)
.+.+....-. . ..+..-.+++.-.++++++.|+.++ .+.+||..+.
T Consensus 476 ~t~~W~~~~~---------------------------~-----p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~ 523 (695)
T 2zwa_A 476 KTREWSMIKS---------------------------L-----SHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEE 523 (695)
T ss_dssp TTTEEEECCC---------------------------C-----SBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTT
T ss_pred CCCcEEECCC---------------------------C-----CCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCC
Confidence 7644322210 0 0011112344434778888887655 6899999888
Q ss_pred EEEEecc------CCCcEEEEEEEcC-CceEEEEeC--C-----CcEEEEEccCCC------cceEEeee-eccccEEEE
Q psy710 200 DAHVRHE------TDAAVIQMQFLTN-EGALITATA--D-----DSLHLWNFRQKR------PEIVHSLK-FQRERITYI 258 (591)
Q Consensus 200 ~~~~~~~------~~~~v~~~~~~~~-~~~l~~~~~--d-----~~i~~wd~~~~~------~~~~~~~~-~~~~~v~~~ 258 (591)
....... .......+.+..+ ++.++.|+. + +.+.+||+.+.. ...+.... ........+
T Consensus 524 ~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~ 603 (695)
T 2zwa_A 524 IFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIK 603 (695)
T ss_dssp EEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEE
T ss_pred ceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEE
Confidence 7765442 1122233555655 666777765 2 458899998874 12222211 111112222
Q ss_pred EecCCCCEEEEEeCC--------ccEEEEEccCccc
Q psy710 259 HLPLQSKWLYVGTEK--------GNIHVVNIESFTL 286 (591)
Q Consensus 259 ~~sp~~~~l~~~~~d--------g~i~i~d~~~~~~ 286 (591)
.+ .++++++.|+.+ ..+.+||+.+.+-
T Consensus 604 ~~-~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~~W 638 (695)
T 2zwa_A 604 YI-TPRKLLIVGGTSPSGLFDRTNSIISLDPLSETL 638 (695)
T ss_dssp EE-ETTEEEEECCBCSSCCCCTTTSEEEEETTTTEE
T ss_pred Ee-CCCEEEEECCccCCCCCCCCCeEEEEECCCCeE
Confidence 23 336777777743 4689999987655
No 344
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=96.15 E-value=0.21 Score=55.02 Aligned_cols=202 Identities=11% Similarity=0.161 Sum_probs=128.5
Q ss_pred eEEEECCCCCEEEEEeCCCcEEEeCCCCeEEEEeccCCCcEEEEEEEcCCceEEEEeCCCcEEEEEccCCCcceEEeeee
Q psy710 171 TAIAFDPIQKLLAIGTKTGSLRLLGRPGVDAHVRHETDAAVIQMQFLTNEGALITATADDSLHLWNFRQKRPEIVHSLKF 250 (591)
Q Consensus 171 ~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~ 250 (591)
-+.-.+|..+.+|.-. ...+.++|+++......+....+|.-=.|-.+ +.|+..+ +..|+-|++.... .++..+..
T Consensus 69 dsAIMnP~~~iiALra-g~~lQiFnl~~k~klks~~~~e~VvfWkWis~-~~l~lVT-~~aVyHW~~~~~s-~P~k~fdR 144 (1630)
T 1xi4_A 69 DSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISL-NTVALVT-DNAVYHWSMEGES-QPVKMFDR 144 (1630)
T ss_pred hhhccCCCcceEEEec-CCeEEEeehHHhhhhcccccCCCceEEEecCC-CeeEEEc-CCeEEEeccCCCC-ccHHHHhc
Confidence 3455678888777664 78899999998888777776667777777644 3454444 3679999996532 34444443
Q ss_pred c----cccEEEEEecCCCCEEEEEe-------CCccEEEEEccCccccceeeehhhhccccccCCCCCeEEEecC--CCC
Q psy710 251 Q----RERITYIHLPLQSKWLYVGT-------EKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDN--PLD 317 (591)
Q Consensus 251 ~----~~~v~~~~~sp~~~~l~~~~-------~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s--p~~ 317 (591)
| ...|..-..+++.++++..+ -.|.+.+|..+.... ..+.+|.+....+... +..
T Consensus 145 ~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~s------------Q~iegha~~F~~~~~~~~~~~ 212 (1630)
T 1xi4_A 145 HSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVS------------QPIEGHAASFAQFKMEGNAEE 212 (1630)
T ss_pred chhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccccc------------hhhhHhHhhhheeccCCCCCC
Confidence 3 35677778889999887433 347888998876543 2556666555444432 201
Q ss_pred CCeEEEEEc---CCEEEEEecccc---------eEEEE-ec---cCCCeeEEEEeecCCEEEEEecCCcEEEEecCCCCC
Q psy710 318 PSKLLLAYE---TGLVVHWDLKLK---------RAEFR-WQ---CSEPIKSVCWHYEGKQFLCSHTDGTISTWAVRPLAK 381 (591)
Q Consensus 318 ~~~l~~~~~---dg~i~iwd~~~~---------~~~~~-~~---~~~~v~~~~~sp~g~~l~s~~~dg~i~vwd~~~~~~ 381 (591)
...++.+.. .+.++|-++... +.... +. ..+-..++..|+.-..+...+.-|.|+++|+. ++.
T Consensus 213 ~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~-t~~ 291 (1630)
T 1xi4_A 213 STLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLE-TGT 291 (1630)
T ss_pred ceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCceEEEEecc-cch
Confidence 123332222 268888888543 11111 11 13334567777777788888899999999999 777
Q ss_pred ceeeeccc
Q psy710 382 PVSVNQPH 389 (591)
Q Consensus 382 ~~~~~~~~ 389 (591)
++..-+-.
T Consensus 292 ~i~~~ris 299 (1630)
T 1xi4_A 292 CIYMNRIS 299 (1630)
T ss_pred hhhhcccc
Confidence 76554433
No 345
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=96.14 E-value=0.33 Score=53.46 Aligned_cols=263 Identities=11% Similarity=0.134 Sum_probs=146.8
Q ss_pred CCCeEEEEeecccCceeeeEEEeeccceEEEEeeCCceEEEEEeCCCcEEEEEeeeeeeeceecccccccccCCCCCCCc
Q psy710 68 ADDSLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGP 147 (591)
Q Consensus 68 ~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (591)
...+|.|-|+..+.....+.+. .-+.-.+|..+.++.-. ..++.++|+++.+.++...
T Consensus 46 ~~~~vvIidl~~~~~~~rrpi~-----AdsAIMnP~~~iiALra-g~~lQiFnl~~k~klks~~---------------- 103 (1630)
T 1xi4_A 46 EQAQVVIIDMNDPSNPIRRPIS-----ADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHT---------------- 103 (1630)
T ss_pred CCceEEEEECCCCCCccccccc-----chhhccCCCcceEEEec-CCeEEEeehHHhhhhcccc----------------
Confidence 3457888888876421111111 22344678777777654 5799999998855333322
Q ss_pred eeccCCCCcCcceeeeccCCCCceEEEECCCCCEEEEEeCCCcEEEeCCCCeE-EEE---ecc--CCCcEEEEEEEcCCc
Q psy710 148 IIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGVD-AHV---RHE--TDAAVIQMQFLTNEG 221 (591)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~-~~~---~~~--~~~~v~~~~~~~~~~ 221 (591)
.+..|.--.|-.+.. |+..+ +..|+-|++.+.. ... .+. ....|..-..+++.+
T Consensus 104 ------------------~~e~VvfWkWis~~~-l~lVT-~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~k 163 (1630)
T 1xi4_A 104 ------------------MTDDVTFWKWISLNT-VALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQK 163 (1630)
T ss_pred ------------------cCCCceEEEecCCCe-eEEEc-CCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCC
Confidence 234455556644433 44444 4569999986421 111 111 145777778888899
Q ss_pred eEEEEe-------CCCcEEEEEccCCCcceEEeeeeccccEEEEEec--C-CCCEEEEEeC---CccEEEEEccCc-cc-
Q psy710 222 ALITAT-------ADDSLHLWNFRQKRPEIVHSLKFQRERITYIHLP--L-QSKWLYVGTE---KGNIHVVNIESF-TL- 286 (591)
Q Consensus 222 ~l~~~~-------~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~s--p-~~~~l~~~~~---dg~i~i~d~~~~-~~- 286 (591)
+++..+ -.|.+.+|..+.+ ..+.+.+|.+....+... + ....++.+.. .+.++|.++... .-
T Consensus 164 W~~l~gi~~~~~~v~G~mQLyS~er~---~sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~ 240 (1630)
T 1xi4_A 164 WLLLTGISAQQNRVVGAMQLYSVDRK---VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGN 240 (1630)
T ss_pred eEEEEeeccCCCcccceeeeeecccc---cchhhhHhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCC
Confidence 876442 3478899998765 445566765544433332 1 1223333322 268899888553 11
Q ss_pred cceeeehhhhccccccCCCCCeEEEecCCCCCCeEEEEEcCCEEEEEecccceEEEEec-cCCCeeEEEEeecCCEEEEE
Q psy710 287 SGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKLLLAYETGLVVHWDLKLKRAEFRWQ-CSEPIKSVCWHYEGKQFLCS 365 (591)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp~g~~l~s~ 365 (591)
.++... ...+.........-..++..++ ....+..-+.-|.|++||+.++.++..-. ....|...+-+....=++..
T Consensus 241 ~~f~kk-~~~~~~~~~~~~Dfpv~~~vs~-k~g~iy~itk~G~~~~~d~~t~~~i~~~ris~~~iF~~~~~~~~~g~~~v 318 (1630)
T 1xi4_A 241 QPFPKK-AVDVFFPPEAQNDFPVAMQISE-KHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGV 318 (1630)
T ss_pred CCCccc-cccccCCcccccCcceEEEecc-ccCEEEEEecCceEEEEecccchhhhhccccCCceEEeccCCCCCceEEE
Confidence 110000 0000111112234456788898 77888888999999999999998875544 33444444333332233333
Q ss_pred ecCCcEEEEecC
Q psy710 366 HTDGTISTWAVR 377 (591)
Q Consensus 366 ~~dg~i~vwd~~ 377 (591)
...|.|.--.++
T Consensus 319 nr~G~vl~v~v~ 330 (1630)
T 1xi4_A 319 NRKGQVLSVCVE 330 (1630)
T ss_pred cCCceEEEEEEc
Confidence 455655555555
No 346
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=95.76 E-value=1.2 Score=43.74 Aligned_cols=261 Identities=10% Similarity=0.091 Sum_probs=144.4
Q ss_pred EEEEEeCCCcEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECC---CCCEE
Q psy710 106 WLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDP---IQKLL 182 (591)
Q Consensus 106 ~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~l 182 (591)
.|.+|+..|.++++-+.+++.++.+..+......-+.-..+....+... ..+..|-... ..+++.. ||++|
T Consensus 72 ~f~SgG~sG~v~v~G~PSmR~l~~IpVF~~~~~~G~G~t~esk~il~~~-----~~~~~gD~HH-p~~S~tdg~yDGryl 145 (638)
T 3sbq_A 72 GFWSGGHQGEVRVLGVPSMRELMRIPVFNVDSATGWGLTNESRHIMGDS-----AKFLNGDCHH-PHISMTDGKYDGKYL 145 (638)
T ss_dssp EEEECGGGCCEEEEEETTTEEEEEECSSSCCTTTCTTTBHHHHHHHGGG-----GGCCCCCCCC-CEEEEETTEEEEEEE
T ss_pred EEeecCcCceEEEEecCCcceEEEeecccCCCCcccCCchhHHHHHhcC-----CCccCCCcCC-CcccccCCeeeeEEE
Confidence 3678888999999999999998888765543321111111111111000 0011111111 2344432 77888
Q ss_pred EEEeC-CCcEEEeCCCCeEEE--EeccCCCcEEEEEEE--cCCceEEEEeCC-------CcE---------EEE---Ecc
Q psy710 183 AIGTK-TGSLRLLGRPGVDAH--VRHETDAAVIQMQFL--TNEGALITATAD-------DSL---------HLW---NFR 238 (591)
Q Consensus 183 ~~~~~-dg~i~i~d~~~~~~~--~~~~~~~~v~~~~~~--~~~~~l~~~~~d-------~~i---------~~w---d~~ 238 (591)
++-.. +..|-..++...++. ...+....+..+.|. |+..+++++++. |.. .+| |..
T Consensus 146 fiNdkan~RvAri~l~~~~~d~Ii~iPn~~~~Hg~~~~~~p~T~yv~~~~e~~~P~pndg~~~~~~~~~~y~~f~~iD~~ 225 (638)
T 3sbq_A 146 FINDKANSRVARIRLDIMKCDKMITVPNVQAIHGLRLQKVPHTKYVFANAEFIIPHPNDGKVFDLQDENSYTMYNAIDAE 225 (638)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEEECTTCSCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCTTSTTEEEEEEEEETT
T ss_pred EEecCCCcceEEEECCcEeeceeEeCCCCcCcccccccccCCccEEEecceeeccCCCCCcccccCChhhceEEEEEcCC
Confidence 88775 566777777766554 334446688888886 677788877642 221 111 111
Q ss_pred CCCcceEEeeeeccccEEEEEecCCCCEEEEEeCCc---------------cEEEEEccCccc-------c--c----ee
Q psy710 239 QKRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEKG---------------NIHVVNIESFTL-------S--G----YI 290 (591)
Q Consensus 239 ~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg---------------~i~i~d~~~~~~-------~--~----~~ 290 (591)
+. +....+.- .+....+..++++++.++.+.+. .+.++++...+. . + ..
T Consensus 226 tm--~v~~Qv~v-~gnld~~~~~~~g~~af~t~yNsE~~~~l~em~~~e~D~~~vfn~~~ie~~vk~G~~~~~~g~gv~V 302 (638)
T 3sbq_A 226 TM--EMAFQVIV-DGNLDNTDADYTGRFAAATCYNSEKAFDLGGMMRNERDWVVVFDIHAVEAAVKAGDFITLGDSKTPV 302 (638)
T ss_dssp TC--SEEEEEEE-SSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSCEEEEEEEHHHHHHHHHTTCCBCCTTCCCCE
T ss_pred cc--EEEEEEEc-CCChhhcCCCCCCCEEEEeeeccccCcChhhcCcccccEEEEecHHHHHHHHhcCCeEEECCCCeeE
Confidence 11 11111111 12233445567888888776542 366666543111 0 0 00
Q ss_pred eehhh------hccccccCCCCCeEEEecCCCCCCeEEEEEc-CCEEEEEeccc------ce-------EEEEeccCCCe
Q psy710 291 INWNK------AIDVCMKTHPGPIIHLSDNPLDPSKLLLAYE-TGLVVHWDLKL------KR-------AEFRWQCSEPI 350 (591)
Q Consensus 291 ~~~~~------~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~-dg~i~iwd~~~------~~-------~~~~~~~~~~v 350 (591)
+.-.+ .+. .+..-......+.++| ||++++.++. +.++.++|+.. ++ +....+-.-..
T Consensus 303 iD~~~~~~~~~~~~-~~iP~pksPHGv~vsP-DGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGP 380 (638)
T 3sbq_A 303 LDGRKKDGKDSKFT-RYVPVPKNPHGCNTSS-DGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGP 380 (638)
T ss_dssp EECSCBTTBCCSSE-EEEEESSSCCCEEECT-TSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCE
T ss_pred EccccccccCCceE-EEEeCCCCCcceeeCC-CCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcc
Confidence 00000 000 0000112335678899 9999888665 88999999884 11 23334455678
Q ss_pred eEEEEeecCCEEEEEecCCcEEEEecC
Q psy710 351 KSVCWHYEGKQFLCSHTDGTISTWAVR 377 (591)
Q Consensus 351 ~~~~~sp~g~~l~s~~~dg~i~vwd~~ 377 (591)
...+|.++|....+-.-|..|.-|++.
T Consensus 381 lHt~Fd~~G~aYTtlfidSqvvkWni~ 407 (638)
T 3sbq_A 381 LHTTFDGRGNAYTTLFIDSQVVKWNME 407 (638)
T ss_dssp EEEEECSSSEEEEEETTTTEEEEEEHH
T ss_pred cEEEECCCCceEeeeeecceEEEEecc
Confidence 899999999655666689999999997
No 347
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=94.86 E-value=0.28 Score=45.50 Aligned_cols=109 Identities=17% Similarity=0.188 Sum_probs=64.5
Q ss_pred cEEEEEeCCCcEEEEcCC-CceeEeeccC-CcceEEEEEe--e-cCCEEEEe-cCCCeEEEEeecccCceeeeEEEeecc
Q psy710 20 KLLAIGTKTGSLRLLGRP-GVDAHVRHET-DAAVIQMQFL--T-NEGALITA-TADDSLHLWNFRQKRPEIVHSLKFQRE 93 (591)
Q Consensus 20 ~~la~g~~dg~i~lw~~~-~~~~~~~~~h-~~~v~~l~~s--p-~~~~l~s~-~~d~~i~vw~~~~~~~~~~~~~~~~~~ 93 (591)
.++++++.||.|.-.|.+ |+....+... ..++....-. + ++..++.. ..||.+..++..++. ....+... .
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~--~~~~~~~~-~ 87 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGL--QKLPLSIR-Q 87 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEE--EEEEEEHH-H
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCc--EEeeeccc-c
Confidence 477889999999999976 6555555433 1222221100 1 22333333 578999888887763 22222211 1
Q ss_pred ce--EEEEee-----------CCceEEEEEeCCCcEEEEEeeeeeeeceec
Q psy710 94 RI--TYIHLP-----------LQSKWLYVGTEKGNIHVVNIESFTLSGYII 131 (591)
Q Consensus 94 ~v--~~~~~~-----------~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~ 131 (591)
.+ .-+... ..+..+++++.++.+...|+.+|+.+..+.
T Consensus 88 lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~ 138 (339)
T 2be1_A 88 LVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFG 138 (339)
T ss_dssp HHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEES
T ss_pred ceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEe
Confidence 11 001111 146788899999999999999999887765
No 348
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=94.45 E-value=3.6 Score=39.29 Aligned_cols=178 Identities=14% Similarity=0.043 Sum_probs=82.7
Q ss_pred CceEEEECCC-CCEEEEEeCCCcEEEeCCCCeEEEEeccC-------------CCcEEEEEEEcC-CceEEEEeCCCcEE
Q psy710 169 QPTAIAFDPI-QKLLAIGTKTGSLRLLGRPGVDAHVRHET-------------DAAVIQMQFLTN-EGALITATADDSLH 233 (591)
Q Consensus 169 ~v~~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-------------~~~v~~~~~~~~-~~~l~~~~~d~~i~ 233 (591)
.+.++.++|. ...+.++..++.|...+-........... ...+..+.+.|+ ...|+++...+ |.
T Consensus 178 ~i~~i~~d~~~~~~l~vg~~~ggl~~s~DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~g-l~ 256 (394)
T 3b7f_A 178 KMHSILVDPRDPKHLYIGMSSGGVFESTDAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCG-IY 256 (394)
T ss_dssp EEEEEEECTTCTTCEEEEEETBEEEEESSTTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTE-EE
T ss_pred ceeEEEECCCCCCEEEEEECCCCEEEECCCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCe-EE
Confidence 4678999883 34455665555565554333322222110 124888999886 35666666544 44
Q ss_pred EEEccCCCcceEEeeee--cc---ccEEEEEecC-CCCEEEEEeC-----------CccEEEEEccCccccceeeehhhh
Q psy710 234 LWNFRQKRPEIVHSLKF--QR---ERITYIHLPL-QSKWLYVGTE-----------KGNIHVVNIESFTLSGYIINWNKA 296 (591)
Q Consensus 234 ~wd~~~~~~~~~~~~~~--~~---~~v~~~~~sp-~~~~l~~~~~-----------dg~i~i~d~~~~~~~~~~~~~~~~ 296 (591)
..+-. + +....+.. .. ..+..++++| +...++++.. ++...+|....+-.. |...
T Consensus 257 ~s~D~-G--~tW~~~~~~l~~~~~~~~~~i~~~p~~~~~l~~~t~~~~~~w~~~~~~~~~~~~~S~DgG~t-----W~~~ 328 (394)
T 3b7f_A 257 RMDRR-E--GVWKRIGDAMPREVGDIGFPIVVHQRDPRTVWVFPMDGSDVWPRVSPGGKPAVYVTRDAGES-----WQRQ 328 (394)
T ss_dssp EEETT-T--TEEECGGGGSCTTTCSCEEEEEECSSCTTCEEEEECBCCSSTTCCBCCSSCCEEEESSTTSC-----CEEE
T ss_pred EeCCC-C--CcceECCCCCCCCCccceEEEEECCCCCCEEEEEeccCCccceeecCCCceeEEEECCCCCC-----ceEC
Confidence 33322 2 23333221 11 2356788876 3344555532 233455554442110 1000
Q ss_pred ccccccCCC----CCeEEEecCCCCCCeEEEEEcCCEEEEEecccceEEEEeccCCCeeEEEEe
Q psy710 297 IDVCMKTHP----GPIIHLSDNPLDPSKLLLAYETGLVVHWDLKLKRAEFRWQCSEPIKSVCWH 356 (591)
Q Consensus 297 ~~~~~~~~~----~~v~~~~~sp~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~s 356 (591)
...+.... .....++++|.+...|+.++.++.|..-+=...........-..+.+++|.
T Consensus 329 -~~glp~~~~~~~~~~~~~~~~p~~~~~l~~g~~~g~l~~S~D~G~tW~~~~~~lp~~~~v~~~ 391 (394)
T 3b7f_A 329 -DRGLPTDQAWLTVKRQAMTADAHAPVGVYFGTTGGEIWASADEGEHWQCIASHLPHIYAVQSA 391 (394)
T ss_dssp -CBTSCCSSCCCCCCTBSEEECCSSSCCEEEECTTSCEEEESSTTSBCEEEECSCSCEEEEEEE
T ss_pred -CCCCCCccccceEEEEEEEECCCCCCEEEEEeCCCeEEEECCCCCCceEcccCCCCeeEEEEe
Confidence 00011100 011357787744466777766666543322222222222333456676664
No 349
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=93.85 E-value=1.4 Score=46.01 Aligned_cols=193 Identities=10% Similarity=0.082 Sum_probs=102.3
Q ss_pred CCCCEEEEEeCC----CcEEEeCCCCeEEEEec-c------C-CCcEEEEEEEc-CCceEEEEeCC------CcEEEEEc
Q psy710 177 PIQKLLAIGTKT----GSLRLLGRPGVDAHVRH-E------T-DAAVIQMQFLT-NEGALITATAD------DSLHLWNF 237 (591)
Q Consensus 177 ~~~~~l~~~~~d----g~i~i~d~~~~~~~~~~-~------~-~~~v~~~~~~~-~~~~l~~~~~d------~~i~~wd~ 237 (591)
.++.+++.|+.+ ..+.+||..+.+..... . . ...-.+++..+ +++.++.|+.+ +.+.+||.
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence 456677777753 45788888776655443 2 1 11122334443 77777777643 35788898
Q ss_pred cCCCcceEEeeeeccccEEEEEecCCCCEEEEEeCCc--cEEEEEccCccccceeeehhhhccccccCCCCCeEEEecCC
Q psy710 238 RQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEKG--NIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNP 315 (591)
Q Consensus 238 ~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg--~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp 315 (591)
.+.....+..+......- +++.-.++++++.|+.++ .+.+||..+.+-..... ..........| ..+.+..
T Consensus 476 ~t~~W~~~~~~p~~R~~h-~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~--~g~~p~~r~~~----~a~v~~~ 548 (695)
T 2zwa_A 476 KTREWSMIKSLSHTRFRH-SACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTP--KDEFFQNSLVS----AGLEFDP 548 (695)
T ss_dssp TTTEEEECCCCSBCCBSC-EEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCC--SSGGGGSCCBS----CEEEEET
T ss_pred CCCcEEECCCCCCCcccc-eEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccC--CCCCCCcccce----eEEEEeC
Confidence 876322222222211122 222324788888887655 68999988765421000 00000011122 2244444
Q ss_pred CC-CCeEEEEEc--C-----CEEEEEecccce------EEEEec--cCCCe-eEEEEeecCCEEEEEecC--------Cc
Q psy710 316 LD-PSKLLLAYE--T-----GLVVHWDLKLKR------AEFRWQ--CSEPI-KSVCWHYEGKQFLCSHTD--------GT 370 (591)
Q Consensus 316 ~~-~~~l~~~~~--d-----g~i~iwd~~~~~------~~~~~~--~~~~v-~~~~~sp~g~~l~s~~~d--------g~ 370 (591)
+ +..++.|+. + ..+.+||+.+.+ ...... ..... .+++...++++++.|+.+ ..
T Consensus 549 -~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~ 627 (695)
T 2zwa_A 549 -VSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNS 627 (695)
T ss_dssp -TTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTS
T ss_pred -CCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCCCCCCe
Confidence 3 556666655 2 468899998877 333222 11111 233333347788888743 45
Q ss_pred EEEEecC
Q psy710 371 ISTWAVR 377 (591)
Q Consensus 371 i~vwd~~ 377 (591)
+.+||+.
T Consensus 628 v~~yd~~ 634 (695)
T 2zwa_A 628 IISLDPL 634 (695)
T ss_dssp EEEEETT
T ss_pred EEEEECC
Confidence 8888887
No 350
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=93.67 E-value=5.7 Score=38.78 Aligned_cols=106 Identities=14% Similarity=0.142 Sum_probs=60.9
Q ss_pred CCcEEEeCCCCc-EEEEEeCCCcEEEEcCCCc----eeEeec---------cCCcceEEEEEeec---CCEEE-EecC--
Q psy710 9 QPTAIAFDPIQK-LLAIGTKTGSLRLLGRPGV----DAHVRH---------ETDAAVIQMQFLTN---EGALI-TATA-- 68 (591)
Q Consensus 9 ~v~~~~~spdg~-~la~g~~dg~i~lw~~~~~----~~~~~~---------~h~~~v~~l~~sp~---~~~l~-s~~~-- 68 (591)
....|+|.|||+ .|.++...|.|++++..+. .+..+. ..+.....|+|+|+ ..+|+ +-+.
T Consensus 15 ~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~~ 94 (463)
T 2wg3_C 15 QPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTNQ 94 (463)
T ss_dssp SEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEECC
T ss_pred CceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCCC
Confidence 346899999996 4555678899999975532 122221 12467889999996 23333 2221
Q ss_pred C----------CeEEEEeeccc--------CceeeeEEE--eeccceEEEEeeCCceEEEEEeCCC
Q psy710 69 D----------DSLHLWNFRQK--------RPEIVHSLK--FQRERITYIHLPLQSKWLYVGTEKG 114 (591)
Q Consensus 69 d----------~~i~vw~~~~~--------~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~ 114 (591)
+ ..|.-|.+..+ ..+.+..+. .....-..|+|.|||.+.++.+..+
T Consensus 95 ~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~~ 160 (463)
T 2wg3_C 95 ERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDGM 160 (463)
T ss_dssp CSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCTT
T ss_pred CCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCCC
Confidence 1 13444555321 112333332 1123467899999998777666533
No 351
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=92.81 E-value=6.8 Score=37.28 Aligned_cols=217 Identities=11% Similarity=-0.015 Sum_probs=106.0
Q ss_pred CceEEEECC-C-CCEEEEEeCCCcEEEeCCCCeEEEEec-------------------cCCCcEEEEEEEcC-CceEEEE
Q psy710 169 QPTAIAFDP-I-QKLLAIGTKTGSLRLLGRPGVDAHVRH-------------------ETDAAVIQMQFLTN-EGALITA 226 (591)
Q Consensus 169 ~v~~~~~~~-~-~~~l~~~~~dg~i~i~d~~~~~~~~~~-------------------~~~~~v~~~~~~~~-~~~l~~~ 226 (591)
.|.+++++| + ...+.+++..+.|...+-......... .....+.++.+.|. ...|+.+
T Consensus 116 ~i~~l~~~~~~~~~~l~~g~~~ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg 195 (394)
T 3b7f_A 116 HVFWLTPGHASEPGTWYAGTSPQGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIG 195 (394)
T ss_dssp EEEEEEECCTTSTTCEEEEEETTEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEE
T ss_pred ceeEEEeCCCCCCCEEEEEecCCcEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEE
Confidence 467888987 2 455666666666766654433322221 01235788999873 4455555
Q ss_pred eCCCcEEEEEccCCCcceEEeeee--c-----------cccEEEEEecCC-CCEEEEEeCCccEEEEEccCccccceeee
Q psy710 227 TADDSLHLWNFRQKRPEIVHSLKF--Q-----------RERITYIHLPLQ-SKWLYVGTEKGNIHVVNIESFTLSGYIIN 292 (591)
Q Consensus 227 ~~d~~i~~wd~~~~~~~~~~~~~~--~-----------~~~v~~~~~sp~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 292 (591)
..++.|... ..+. +....+.. . ...+.++.++|+ ...|+++...+ |...+-.....
T Consensus 196 ~~~ggl~~s--~DgG-~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~g-l~~s~D~G~tW------ 265 (394)
T 3b7f_A 196 MSSGGVFES--TDAG-TDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCG-IYRMDRREGVW------ 265 (394)
T ss_dssp EETBEEEEE--SSTT-SSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTE-EEEEETTTTEE------
T ss_pred ECCCCEEEE--CCCC-CCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCe-EEEeCCCCCcc------
Confidence 544444332 2211 11111110 0 134888999886 35677776554 44433222111
Q ss_pred hhhhccccccC-CCCCeEEEecCCCCCCeEEEEEc-----------CCEEEEEeccc-ceEEEEec----cCC-----Ce
Q psy710 293 WNKAIDVCMKT-HPGPIIHLSDNPLDPSKLLLAYE-----------TGLVVHWDLKL-KRAEFRWQ----CSE-----PI 350 (591)
Q Consensus 293 ~~~~~~~~~~~-~~~~v~~~~~sp~~~~~l~~~~~-----------dg~i~iwd~~~-~~~~~~~~----~~~-----~v 350 (591)
... ...+.. ....+..++++|.+...|..+.. ++...+|.... ++--..+. ... ..
T Consensus 266 -~~~-~~~l~~~~~~~~~~i~~~p~~~~~l~~~t~~~~~~w~~~~~~~~~~~~~S~DgG~tW~~~~~glp~~~~~~~~~~ 343 (394)
T 3b7f_A 266 -KRI-GDAMPREVGDIGFPIVVHQRDPRTVWVFPMDGSDVWPRVSPGGKPAVYVTRDAGESWQRQDRGLPTDQAWLTVKR 343 (394)
T ss_dssp -ECG-GGGSCTTTCSCEEEEEECSSCTTCEEEEECBCCSSTTCCBCCSSCCEEEESSTTSCCEEECBTSCCSSCCCCCCT
T ss_pred -eEC-CCCCCCCCccceEEEEECCCCCCEEEEEeccCCccceeecCCCceeEEEECCCCCCceECCCCCCCccccceEEE
Confidence 110 000111 01345678888744555665542 23334554443 22222221 111 12
Q ss_pred eEEEEeec-CCEEEEEecCCcEEEEecCCCCCceeeecccccccCCCCCCCCCcceEEEEe
Q psy710 351 KSVCWHYE-GKQFLCSHTDGTISTWAVRPLAKPVSVNQPHIKTNKDGKLEQCKPIQKVEWK 410 (591)
Q Consensus 351 ~~~~~sp~-g~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 410 (591)
..++++|. ...|+.++.++.| |-....++.-+.+... ...+.+|+|.
T Consensus 344 ~~~~~~p~~~~~l~~g~~~g~l--~~S~D~G~tW~~~~~~-----------lp~~~~v~~~ 391 (394)
T 3b7f_A 344 QAMTADAHAPVGVYFGTTGGEI--WASADEGEHWQCIASH-----------LPHIYAVQSA 391 (394)
T ss_dssp BSEEECCSSSCCEEEECTTSCE--EEESSTTSBCEEEECS-----------CSCEEEEEEE
T ss_pred EEEEECCCCCCEEEEEeCCCeE--EEECCCCCCceEcccC-----------CCCeeEEEEe
Confidence 35788874 3456666655654 4444356665555544 4557777775
No 352
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=89.57 E-value=12 Score=36.45 Aligned_cols=116 Identities=11% Similarity=0.115 Sum_probs=63.6
Q ss_pred ccEEEEEecCCCC-EEEEEeCCccEEEEEccCccccceeeehhhhcccc-ccCCCCCeEEEecCCCC---CCeEEEEEc-
Q psy710 253 ERITYIHLPLQSK-WLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVC-MKTHPGPIIHLSDNPLD---PSKLLLAYE- 326 (591)
Q Consensus 253 ~~v~~~~~sp~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~sp~~---~~~l~~~~~- 326 (591)
.....|+|.|+|. .|+++...|.|++++...................- ..........|+|+| + ..+|+....
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P-~f~~n~~lYv~yt~ 92 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHP-NYKKNGKLYVSYTT 92 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECT-THHHHCEEEEEEEE
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCC-CCcCCCEEEEEEeC
Confidence 5567899999996 56667788999999754321111011100000000 012246788999999 5 234444321
Q ss_pred --C----------CEEEEEeccc----------ceEEEEec---cCCCeeEEEEeecCCEEEEEecCC
Q psy710 327 --T----------GLVVHWDLKL----------KRAEFRWQ---CSEPIKSVCWHYEGKQFLCSHTDG 369 (591)
Q Consensus 327 --d----------g~i~iwd~~~----------~~~~~~~~---~~~~v~~~~~sp~g~~l~s~~~dg 369 (591)
+ ..|.-|.+.. .+.+..+. .......|+|.|||.+.++.++.+
T Consensus 93 ~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~~ 160 (463)
T 2wg3_C 93 NQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDGM 160 (463)
T ss_dssp CCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCTT
T ss_pred CCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCCC
Confidence 1 1344455432 12322222 234568899999998877776544
No 353
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=89.01 E-value=12 Score=33.49 Aligned_cols=181 Identities=13% Similarity=0.111 Sum_probs=94.6
Q ss_pred CceEEEECCCCCEEEEEeCCCcEEEeCCCCeE-EEEeccCCCcEEEEEEEcCCceEEEEeCCCcEEEEEccCCCcceEEe
Q psy710 169 QPTAIAFDPIQKLLAIGTKTGSLRLLGRPGVD-AHVRHETDAAVIQMQFLTNEGALITATADDSLHLWNFRQKRPEIVHS 247 (591)
Q Consensus 169 ~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~ 247 (591)
.|..++...... ++. . ||.|+.|.....- +-........|..++...+. .+.-. ||.|+.|-..... +.- .
T Consensus 64 ~i~~ia~G~~hs-~~l-~-~G~v~~wG~n~~Gqlg~P~~~~~~v~~ia~G~~h--s~al~-~G~v~~wG~n~~g-qlg-~ 135 (282)
T 3qhy_B 64 GVDAIAAGNYHS-LAL-K-DGEVIAWGGNEDGQTTVPAEARSGVDAIAAGAWA--SYALK-DGKVIAWGDDSDG-QTT-V 135 (282)
T ss_dssp CCCEEEECSSEE-EEE-E-TTEEEEEECCTTSTTCCCGGGSSSEEEEEEETTE--EEEEE-TTEEEEEECCTTS-TTS-C
T ss_pred CEEEEEeCCCEE-EEE-E-CCEEEEeeCCCCCCCCCCcccCCCeEEEECcCCE--EEEEe-CCeEEEecCCCCC-cCC-C
Confidence 456666554332 333 4 8888888643211 10011113367777766443 33334 8999999765431 110 0
Q ss_pred eeeccccEEEEEecCCCCEEEEEeCCccEEEEEccCccccceeeehhhhccccccCCCCCeEEEecCCCCCCeEEEEEcC
Q psy710 248 LKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKLLLAYET 327 (591)
Q Consensus 248 ~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~d 327 (591)
.......|..++...+. .+.-. ||.++.|-.......+ ....-...|..++... + ..++. .|
T Consensus 136 ~~~~~~~i~~i~~G~~~--~~~l~-~G~v~~wG~n~~gqlg-----------~p~~~~~~v~~i~~G~-~-hs~al--~~ 197 (282)
T 3qhy_B 136 PAEAQSGVTALDGGVYT--ALAVK-NGGVIAWGDNYFGQTT-----------VPAEAQSGVDDVAGGI-F-HSLAL--KD 197 (282)
T ss_dssp CGGGGSSEEEEEECSSE--EEEEE-TTEEEEEECCTTSTTS-----------CCGGGGSSEEEEEECS-S-EEEEE--ET
T ss_pred CccCCCCeEEEEcccCE--EEEEE-CCEEEEecCCCCCCCC-----------CceecCCCeEEEEecC-C-EEEEE--EC
Confidence 11122457666654332 22233 7899999766533321 0111134677777655 2 33443 59
Q ss_pred CEEEEEeccc-ceEEEEeccCCCeeEEEEeecCCEEEEEecCCcEEEEecCC
Q psy710 328 GLVVHWDLKL-KRAEFRWQCSEPIKSVCWHYEGKQFLCSHTDGTISTWAVRP 378 (591)
Q Consensus 328 g~i~iwd~~~-~~~~~~~~~~~~v~~~~~sp~g~~l~s~~~dg~i~vwd~~~ 378 (591)
|.|+.|=... +++-........|..++-..+. .++. . ||.|+.|-...
T Consensus 198 G~v~~wG~n~~gqlg~p~~~~~~v~~i~~G~~h-~~al-~-~g~v~~wG~n~ 246 (282)
T 3qhy_B 198 GKVIAWGDNRYKQTTVPTEALSGVSAIASGEWY-SLAL-K-NGKVIAWGSSR 246 (282)
T ss_dssp TEEEEEECCTTSTTCCCGGGGSSCCEEEECSSC-EEEE-E-TTEEEEESTTC
T ss_pred CeEEEEECCCCCCCCCCcccCCCceEEEcCCCE-EEEE-E-CCEEEEecCCC
Confidence 9999996543 2221111223457777664433 3333 3 99999998873
No 354
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=87.23 E-value=17 Score=33.11 Aligned_cols=194 Identities=13% Similarity=0.109 Sum_probs=112.9
Q ss_pred CCCCEEEEEeCCCcEEEeCCCCeE--------E-EEeccCCCcEEEEEEEcCCceEEEEeCCCcEEEEEccCCC------
Q psy710 177 PIQKLLAIGTKTGSLRLLGRPGVD--------A-HVRHETDAAVIQMQFLTNEGALITATADDSLHLWNFRQKR------ 241 (591)
Q Consensus 177 ~~~~~l~~~~~dg~i~i~d~~~~~--------~-~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~------ 241 (591)
++...+++.+.+|.|+-....... . .........+..+........++..+..|.++-+....-.
T Consensus 6 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lke~D~l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~~~r~~ 85 (312)
T 1suu_A 6 QKENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLNDGDEIVIALCVNTHDYLFMISNEGKLYLINAYEIKDSSRAS 85 (312)
T ss_dssp --CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCC-----
T ss_pred CCCCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccCCCCEEEEEEEECCCCEEEEEECCCeEEEEEHHHCCCCCccC
Confidence 455678889999999876443221 1 1112223456666666666778888888988777664210
Q ss_pred -cce---EEeeeeccccEEEEEecC---CCCEEEEEeCCccEEEEEccCccccceeeehhhhccccccCCCCCeEEEecC
Q psy710 242 -PEI---VHSLKFQRERITYIHLPL---QSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDN 314 (591)
Q Consensus 242 -~~~---~~~~~~~~~~v~~~~~sp---~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s 314 (591)
+.. .-.+... ..|..+..-+ +..+++..+.+|.++...+........ .......+.. ...+..+...
T Consensus 86 ~G~~i~~~l~l~~~-e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~----~G~~~i~L~~-~d~lv~~~~~ 159 (312)
T 1suu_A 86 KGQNISELINLGDQ-EEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKS----RGVIVIKLND-KDFVTSAEIV 159 (312)
T ss_dssp --CBGGGTSCCCTT-CCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC--------CEECBCCCT-TCCEEEEEEE
T ss_pred CCcChhhccCCCCC-CEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCC----CcEEEEecCC-CCEEEEEEEe
Confidence 000 0112222 3444443322 456788889999999988765432100 0000112333 4556665555
Q ss_pred CCCCCeEEEEEcCCEEEEEeccc---------ceEEEEeccCCCeeEEEEeecCCEEEEEecCCcEEEEecC
Q psy710 315 PLDPSKLLLAYETGLVVHWDLKL---------KRAEFRWQCSEPIKSVCWHYEGKQFLCSHTDGTISTWAVR 377 (591)
Q Consensus 315 p~~~~~l~~~~~dg~i~iwd~~~---------~~~~~~~~~~~~v~~~~~sp~g~~l~s~~~dg~i~vwd~~ 377 (591)
. +...++..+.+|.+..+.... |.....+.....|..+..-.++..+++.+..|..+..++.
T Consensus 160 ~-~~~~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~~~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~~ 230 (312)
T 1suu_A 160 F-KDEKVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLKEGDLFVKVLSVKENPYLLIVSENGYGKRLNMS 230 (312)
T ss_dssp C-TTCEEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCCTTCCEEEEEECTTCSEEEEEETTSEEEEEEGG
T ss_pred C-CCCEEEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeCCCCEEEEEEEECCCCeEEEEECCCceEEEEHH
Confidence 5 566788899999998887754 1111112235567776665566778888999998888886
No 355
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=87.00 E-value=18 Score=32.96 Aligned_cols=194 Identities=13% Similarity=0.143 Sum_probs=109.1
Q ss_pred CCCCEEEEEeCCCcEEEeCCCCeEEEEe---------ccCCCcEEEEEEEcCCceEEEEeCCCcEEEEEccC---C----
Q psy710 177 PIQKLLAIGTKTGSLRLLGRPGVDAHVR---------HETDAAVIQMQFLTNEGALITATADDSLHLWNFRQ---K---- 240 (591)
Q Consensus 177 ~~~~~l~~~~~dg~i~i~d~~~~~~~~~---------~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~---~---- 240 (591)
|+...+++.+.+|.|+--.+...+.... ......+..+........|+..+..|.++-+.... .
T Consensus 1 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~~ke~D~l~~~~~~~~~~~ll~fT~~G~~~~~~~~elp~~~~~a 80 (307)
T 1zi0_A 1 TQEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRGA 80 (307)
T ss_dssp CCCEEEEEEETTSEEEEEECC--------------------CCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCCCCSSS
T ss_pred CCCcEEEEEeCCCEEEEeeHHHhhhhccCCCCceeeeeCCCCEEEEEEEECCCCEEEEEECCCEEEEEEhhHCcCCCCCC
Confidence 3456688889999998765543322111 11234555555555666777777788876665431 1
Q ss_pred CcceEE---eeeeccccEEEEEe-c--CCCCEEEEEeCCccEEEEEccCccccceeeehhhhccccccCCCCCeEEEecC
Q psy710 241 RPEIVH---SLKFQRERITYIHL-P--LQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDN 314 (591)
Q Consensus 241 ~~~~~~---~~~~~~~~v~~~~~-s--p~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s 314 (591)
.+.++. .+. ....|.++.. . .++.+++..+.+|.++.-.+........ .......+..+ ..+..+...
T Consensus 81 ~G~~i~~~l~l~-~~e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~r----~G~~~i~l~~~-d~lv~~~~~ 154 (307)
T 1zi0_A 81 RGRPIVNLLPLE-QDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRT----AGKVAIKLVDG-DELIGVDLT 154 (307)
T ss_dssp CCEEGGGTSCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCCT----TCEESSCCCTT-CCEEEEEEE
T ss_pred CCeEhhhccCCC-CCCEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhcccc----CCeEEEEECCC-CEEEEEEEe
Confidence 111111 122 2244555533 2 3456788899999999988765433210 00011123333 555555554
Q ss_pred CCCCCeEEEEEcCCEEEEEeccc---------ceEEEEeccCCCeeEEEEeecCCEEEEEecCCcEEEEecC
Q psy710 315 PLDPSKLLLAYETGLVVHWDLKL---------KRAEFRWQCSEPIKSVCWHYEGKQFLCSHTDGTISTWAVR 377 (591)
Q Consensus 315 p~~~~~l~~~~~dg~i~iwd~~~---------~~~~~~~~~~~~v~~~~~sp~g~~l~s~~~dg~i~vwd~~ 377 (591)
. +...++..+.+|.+..++... |...-.+...+.|.++...+++..++..+..|.++-.++.
T Consensus 155 ~-~~~~i~l~T~~G~~irf~~~~v~~~gr~a~Gv~~i~L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Kr~~~~ 225 (307)
T 1zi0_A 155 S-GEDEVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLGEGDKVVSLIVPRGDGAILTATQNGYGKRTAVA 225 (307)
T ss_dssp C-TTCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEECCCSSCEEEEEETTSEEEEECGG
T ss_pred C-CCCEEEEECCCCcEEEEEHHHcCccCCCCCCeEeEEeCCCCEEEEEEEecCCCEEEEEEcCCceEEEEHH
Confidence 5 556788888899888887653 1111122345667777655556678888889988888775
No 356
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=81.35 E-value=30 Score=30.98 Aligned_cols=221 Identities=10% Similarity=0.026 Sum_probs=106.7
Q ss_pred ceEEEEEeecCCEEEEecCCCeEEEEeecccCceeeeEEEeeccceEEEEeeCCceEEEEEeCCCcEEEEEeeeeeeece
Q psy710 50 AVIQMQFLTNEGALITATADDSLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGY 129 (591)
Q Consensus 50 ~v~~l~~sp~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~ 129 (591)
.|..++-... +.+.-. |+.+..|-..... +. ..-......|..++...+...+ . . ||.|+.|-....-....
T Consensus 25 ~i~~ia~G~~--h~~~l~-~G~v~~wG~n~~G-ql-g~p~~~~~~i~~ia~G~~hs~~-l-~-~G~v~~wG~n~~Gqlg~ 96 (282)
T 3qhy_B 25 GVDAIAGGYF--HGLALK-GGKVLGWGANLNG-QL-TMPAATQSGVDAIAAGNYHSLA-L-K-DGEVIAWGGNEDGQTTV 96 (282)
T ss_dssp SCCEEEECSS--EEEEEE-TTEEEEEECCSSS-TT-SCCGGGGSCCCEEEECSSEEEE-E-E-TTEEEEEECCTTSTTCC
T ss_pred CCcEEEeCCC--eEEEEE-CCEEEEEeCCCCC-CC-CCCccCCCCEEEEEeCCCEEEE-E-E-CCEEEEeeCCCCCCCCC
Confidence 5666654432 322234 8888888765421 11 0000112356666665443333 3 4 78888886553111000
Q ss_pred ecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCCCCEEEEEeCCCcEEEeCCCCe-EEEEeccCC
Q psy710 130 IINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGV-DAHVRHETD 208 (591)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~-~~~~~~~~~ 208 (591)
+. .....|..++...+. .+.-+ +|.|+.|..... ++-......
T Consensus 97 ----------------------------P~-----~~~~~v~~ia~G~~h--s~al~-~G~v~~wG~n~~gqlg~~~~~~ 140 (282)
T 3qhy_B 97 ----------------------------PA-----EARSGVDAIAAGAWA--SYALK-DGKVIAWGDDSDGQTTVPAEAQ 140 (282)
T ss_dssp ----------------------------CG-----GGSSSEEEEEEETTE--EEEEE-TTEEEEEECCTTSTTSCCGGGG
T ss_pred ----------------------------Cc-----ccCCCeEEEECcCCE--EEEEe-CCeEEEecCCCCCcCCCCccCC
Confidence 00 012245555554333 33334 888888854321 110111123
Q ss_pred CcEEEEEEEcCCceEEEEeCCCcEEEEEccCCCcceEEeeeeccccEEEEEecCCCCEEEEEeCCccEEEEEccCccccc
Q psy710 209 AAVIQMQFLTNEGALITATADDSLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSG 288 (591)
Q Consensus 209 ~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~ 288 (591)
..|..++...+. .+.-. ||.+..|-..... +.- .-......|..++...+. .++. .||.++.|-.......+
T Consensus 141 ~~i~~i~~G~~~--~~~l~-~G~v~~wG~n~~g-qlg-~p~~~~~~v~~i~~G~~h-s~al--~~G~v~~wG~n~~gqlg 212 (282)
T 3qhy_B 141 SGVTALDGGVYT--ALAVK-NGGVIAWGDNYFG-QTT-VPAEAQSGVDDVAGGIFH-SLAL--KDGKVIAWGDNRYKQTT 212 (282)
T ss_dssp SSEEEEEECSSE--EEEEE-TTEEEEEECCTTS-TTS-CCGGGGSSEEEEEECSSE-EEEE--ETTEEEEEECCTTSTTC
T ss_pred CCeEEEEcccCE--EEEEE-CCEEEEecCCCCC-CCC-CceecCCCeEEEEecCCE-EEEE--ECCeEEEEECCCCCCCC
Confidence 356666654332 22233 7999999765431 110 000112457777664432 3333 58999999765543321
Q ss_pred eeeehhhhccccccCCCCCeEEEecCCCCCCeEEEEEcCCEEEEEeccc
Q psy710 289 YIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKLLLAYETGLVVHWDLKL 337 (591)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~iwd~~~ 337 (591)
........|..++... . ..++.. ||.|+.|=...
T Consensus 213 -----------~p~~~~~~v~~i~~G~-~-h~~al~--~g~v~~wG~n~ 246 (282)
T 3qhy_B 213 -----------VPTEALSGVSAIASGE-W-YSLALK--NGKVIAWGSSR 246 (282)
T ss_dssp -----------CCGGGGSSCCEEEECS-S-CEEEEE--TTEEEEESTTC
T ss_pred -----------CCcccCCCceEEEcCC-C-EEEEEE--CCEEEEecCCC
Confidence 0011123466676554 2 333333 89999996554
No 357
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=80.37 E-value=58 Score=33.74 Aligned_cols=104 Identities=10% Similarity=0.112 Sum_probs=57.4
Q ss_pred CCCcEEEEEccCCCc-----ceEEe-ee-eccccEEEEEecCCCCEEEEEeCCc--cEEEEEccCccccceeeehhhhcc
Q psy710 228 ADDSLHLWNFRQKRP-----EIVHS-LK-FQRERITYIHLPLQSKWLYVGTEKG--NIHVVNIESFTLSGYIINWNKAID 298 (591)
Q Consensus 228 ~d~~i~~wd~~~~~~-----~~~~~-~~-~~~~~v~~~~~sp~~~~l~~~~~dg--~i~i~d~~~~~~~~~~~~~~~~~~ 298 (591)
..+.|...++..... ..... +. .....+..+.+..+ .++++...++ .+.++++.+++..... .
T Consensus 318 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~l~~~~~~~~~~~l~~~~~~~g~~~~~~-------~ 389 (711)
T 4hvt_A 318 KAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKD-RVFLATYDNVVAKVVTFTLENEQWTKPV-------V 389 (711)
T ss_dssp CTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSS-CEEEEEEETTEEEEEEECEETTEECCCE-------E
T ss_pred CCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECC-EEEEEEEECCEEEEEEEECCCCceEEEe-------c
Confidence 457788999876310 11222 22 23356778888765 5666777776 4677777655311000 0
Q ss_pred ccccCCCCCeEEEecCCCCCCeEE-EEEc---CCEEEEEecccceEEE
Q psy710 299 VCMKTHPGPIIHLSDNPLDPSKLL-LAYE---TGLVVHWDLKLKRAEF 342 (591)
Q Consensus 299 ~~~~~~~~~v~~~~~sp~~~~~l~-~~~~---dg~i~iwd~~~~~~~~ 342 (591)
..+.. .+.+.....++ +++.++ +.+. -+.+..+|+. ++...
T Consensus 390 i~lp~-~~~~~~~~~~~-~~~~~~~~~ss~~~P~~~~~~d~~-~~~~~ 434 (711)
T 4hvt_A 390 LKLPY-QNAIFGMSSYE-EEEEALITIENSIVPPTIYLWVKT-HELKI 434 (711)
T ss_dssp ECCCS-TTCEEEEECCT-TCSCEEEEEECSSSCCEEEEECTT-SCEEE
T ss_pred cCCCC-CeEEEEEeecC-cCCEEEEEEecCCCCCEEEEEeCC-CcEEE
Confidence 11221 24566677777 665444 4333 4678888887 55443
No 358
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=80.33 E-value=35 Score=31.26 Aligned_cols=156 Identities=15% Similarity=0.171 Sum_probs=89.1
Q ss_pred CCCEEEEEeCCCcEEEeCCCCe-------EEEEeccCCCcEEEEEEEcCCceEEEEeCCCcEEEEEcc--CCC-----cc
Q psy710 178 IQKLLAIGTKTGSLRLLGRPGV-------DAHVRHETDAAVIQMQFLTNEGALITATADDSLHLWNFR--QKR-----PE 243 (591)
Q Consensus 178 ~~~~l~~~~~dg~i~i~d~~~~-------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~--~~~-----~~ 243 (591)
+...++..+.+|.++...+... ...........+..+........|+..+.+|.+..+... .-. ..
T Consensus 108 ~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke~D~lv~~~~~~~~d~ill~T~~G~~~rf~~~~~eip~~gr~a~ 187 (327)
T 3uc1_A 108 DAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRDNDELVGAVLCSAGDDLLLVSANGQSIRFSATDEALRPMGRATS 187 (327)
T ss_dssp SSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCTTCCEEEEEEECTTCEEEEEETTSEEEEEECCTTTSCCCCTTSB
T ss_pred CCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECCCCEEEEEEEecCCCEEEEEECCCeEEEEECcccccCcCCcCCC
Confidence 5678999999999998654321 111122224566666666666778888888988888776 210 01
Q ss_pred eEE--eeeeccccEEEEEecCCCCEEEEEeCCccEEEEEccCccccceeeehhhhccccccCCCCCeEEEecCCCCCCeE
Q psy710 244 IVH--SLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKL 321 (591)
Q Consensus 244 ~~~--~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l 321 (591)
-+. .+. ....|.++...+++..++..+..|.++.-.+........-- .......+....+.+..+.... +...+
T Consensus 188 Gv~~i~L~-~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~R~~--~G~~~~~l~~~~d~lv~~~~~~-~~~~i 263 (327)
T 3uc1_A 188 GVQGMRFN-IDDRLLSLNVVREGTYLLVATSGGYAKRTAIEEYPVQGRGG--KGVLTVMYDRRRGRLVGALIVD-DDSEL 263 (327)
T ss_dssp CEESSCCC-TTCCEEEEEECCTTCEEEEEETTSEEEEEEGGGSCBCCTTS--CCEESSCCCTTTCSEEEEEEEC-TTCEE
T ss_pred CeeeecCC-CCCEEEEEEEECCCCEEEEEeCCCcEEEEEHHHccccCcCC--CcEEEEEecCCCCeEEEEEEeC-CCccE
Confidence 111 122 23456666655666788899999999988876544321000 0000111222133455544444 44566
Q ss_pred EEEEcCCEEEEEeccc
Q psy710 322 LLAYETGLVVHWDLKL 337 (591)
Q Consensus 322 ~~~~~dg~i~iwd~~~ 337 (591)
+..+.+|.+.-++...
T Consensus 264 ~l~T~~G~~ir~~~~~ 279 (327)
T 3uc1_A 264 YAVTSGGGVIRTAARQ 279 (327)
T ss_dssp EEEEGGGCEEEEEGGG
T ss_pred EEEcCCCeEEEEehhh
Confidence 6677777776676543
No 359
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=79.94 E-value=41 Score=31.75 Aligned_cols=206 Identities=13% Similarity=0.109 Sum_probs=105.9
Q ss_pred ceEEEECCCCCEEEEEeCCCcEEEeCCCC-----------eE-EEEecc-CCCcEEEEEEEcCCceEEEEeCCCcEEEEE
Q psy710 170 PTAIAFDPIQKLLAIGTKTGSLRLLGRPG-----------VD-AHVRHE-TDAAVIQMQFLTNEGALITATADDSLHLWN 236 (591)
Q Consensus 170 v~~~~~~~~~~~l~~~~~dg~i~i~d~~~-----------~~-~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd 236 (591)
+..++++.-....+.-+.+|.|+.|.... .. ...... ....|..++. .....++...+|.|+.|-
T Consensus 107 ~~~v~i~~G~~h~~al~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~va~--G~~hs~alt~~G~v~~wG 184 (389)
T 3kci_A 107 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAA--GGAHSACVTAAGDLYTWG 184 (389)
T ss_dssp EEEEEECTTCSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEE--CSSEEEEEETTSCEEEEE
T ss_pred eeEEEECcCCCeEEEEcCCCCEEEEeCCCCCcCCCCCCccCcCCeEecccCCCeEEEEEe--CcCeEEEEeCCCeEEEeC
Confidence 34456666556666677888898884321 11 111111 1225555554 344556667789999997
Q ss_pred ccCC------Cc-ce--EEeee-eccccEEEEEecCCCCEEEEEeCCccEEEEEccCccccceeeehhhhcccccc-CCC
Q psy710 237 FRQK------RP-EI--VHSLK-FQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMK-THP 305 (591)
Q Consensus 237 ~~~~------~~-~~--~~~~~-~~~~~v~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~-~~~ 305 (591)
.... .. .. ...+. .....|..++......+.+.-..||.|+.|-.......+.--........... ...
T Consensus 185 ~n~~GqLG~~~~~~~~~p~~v~~~~~~~v~~ia~G~g~~~t~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~ 264 (389)
T 3kci_A 185 KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTG 264 (389)
T ss_dssp CCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEECCSSCEEEEEETTTEEEEEECCGGGTTSSSSCCCEEEEEECGGGTT
T ss_pred CCCCCCcCCCCCcccccceEecccCCCeEEEEEEcCCCcEEEEEccCCEEEEEeCCCCCCCCCCCCCCccccEEecccCC
Confidence 5321 00 01 11111 12235667766543355666678999999975543221100000000000111 112
Q ss_pred CCeEEEecCCCCCCeEEEEEcCCEEEEEeccc-c----------eEEEEec--cCCCeeEEEEeecCCEEEEEecCCcEE
Q psy710 306 GPIIHLSDNPLDPSKLLLAYETGLVVHWDLKL-K----------RAEFRWQ--CSEPIKSVCWHYEGKQFLCSHTDGTIS 372 (591)
Q Consensus 306 ~~v~~~~~sp~~~~~l~~~~~dg~i~iwd~~~-~----------~~~~~~~--~~~~v~~~~~sp~g~~l~s~~~dg~i~ 372 (591)
..|..++... ...+.-..||.|+.|=... + .....+. ....|..++. .....+....||.|+
T Consensus 265 ~~v~~v~~G~---~hs~alt~~G~v~~wG~n~~GqLG~g~~~~~~~P~~v~~l~~~~v~~ia~--G~~h~~al~~~G~v~ 339 (389)
T 3kci_A 265 LGVVKVECGS---QFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIAT--GSLHCVCCTEDGEVY 339 (389)
T ss_dssp SCEEEEEEET---TEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTCCEEEEEE--CSSEEEEEETTCCEE
T ss_pred CcEEEEeCCC---CEEEEEeCCCeEEEEeCCCCCCCCCCCCccccCCeEeccCCCCCEEEEEe--ccCeEEEECCCCCEE
Confidence 2466666544 4555557889999996532 1 1111222 2245666655 344556667999999
Q ss_pred EEecCCCCCc
Q psy710 373 TWAVRPLAKP 382 (591)
Q Consensus 373 vwd~~~~~~~ 382 (591)
.|-....+++
T Consensus 340 ~wG~n~~GqL 349 (389)
T 3kci_A 340 TWGDNDEGQL 349 (389)
T ss_dssp EEECCTTSTT
T ss_pred EeeCCCCCcC
Confidence 9998855443
No 360
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=74.80 E-value=35 Score=36.88 Aligned_cols=71 Identities=10% Similarity=0.019 Sum_probs=46.6
Q ss_pred CCeEEEecCCCCCCeEEEEEcCCEEEEEecccceEEEEecc------CCCeeEEEEee-cCCEEEEE---ecCCcEEEEe
Q psy710 306 GPIIHLSDNPLDPSKLLLAYETGLVVHWDLKLKRAEFRWQC------SEPIKSVCWHY-EGKQFLCS---HTDGTISTWA 375 (591)
Q Consensus 306 ~~v~~~~~sp~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~------~~~v~~~~~sp-~g~~l~s~---~~dg~i~vwd 375 (591)
..+.+++..+ +..++++-+.|+++|+|++.+++++....- ..........| ++.++.+- ..+|..++|.
T Consensus 236 ~~~~~~~~~~-~~~~lftl~~D~~LRiWsl~t~~~v~t~dL~~~~~~~~~~~~~~~~~~~~~~i~v~~s~~~~g~F~~~~ 314 (950)
T 4gq2_M 236 NTIISMIFLS-TYNVLVMLSLDYKLKVLDLSTNQCVETIELSQTILPLQSFPYLTSDHTTNSFIALYYPDNSHGSFSIYK 314 (950)
T ss_dssp TCEEEEEEET-TTTEEEEEETTCEEEEEETTTTEEEEEEECCCCCCCSCCCCCEEECSSSTTEEEEEECCSSSCEEEEEE
T ss_pred ceEEEEeecC-CCcEEEEEECCCEEEEEECCCCCeEeeecccccCCccccccccccCCCcccEEEEEEcCCCCcEEEEEE
Confidence 3567778888 888999999999999999999999877541 11111122222 22333322 2457788887
Q ss_pred cC
Q psy710 376 VR 377 (591)
Q Consensus 376 ~~ 377 (591)
+.
T Consensus 315 ~~ 316 (950)
T 4gq2_M 315 LN 316 (950)
T ss_dssp EE
T ss_pred Ee
Confidence 75
No 361
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=73.26 E-value=7.7 Score=39.70 Aligned_cols=34 Identities=15% Similarity=0.195 Sum_probs=28.7
Q ss_pred CCCCcceEEEEEecCCcEEEEeCCCCceeEEEEe
Q psy710 554 TSCSYYEVILTGHADGSVKFWDASAGNLQVLYKL 587 (591)
Q Consensus 554 ~~~~~~~~l~t~~~Dg~vr~Wd~~~~~l~~~~~~ 587 (591)
+...+.++|+|-+.|.++|+||+.++.+.....+
T Consensus 226 ~~~~~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 226 CKLFHERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EEEETTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred EeccCCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 3356688999999999999999999987776665
No 362
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=72.13 E-value=67 Score=32.26 Aligned_cols=58 Identities=7% Similarity=-0.034 Sum_probs=42.1
Q ss_pred CeEEEecCCCCCCeEEEEEc------------CCEEEEEecccceEEEEec--cCCCeeEEEEeecCCEEEEE
Q psy710 307 PIIHLSDNPLDPSKLLLAYE------------TGLVVHWDLKLKRAEFRWQ--CSEPIKSVCWHYEGKQFLCS 365 (591)
Q Consensus 307 ~v~~~~~sp~~~~~l~~~~~------------dg~i~iwd~~~~~~~~~~~--~~~~v~~~~~sp~g~~l~s~ 365 (591)
..-.|+|+| .+++++.-.. ...+.+.+..++++.+.+. ....++.++|+||++.|...
T Consensus 477 ~PDNL~fd~-~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 477 SPDGLGFDK-AGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CEEEEEECT-TCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CCcceEECC-CCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 346789999 8886655322 1356677777888776665 56789999999999887665
No 363
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=71.67 E-value=98 Score=32.04 Aligned_cols=94 Identities=10% Similarity=0.055 Sum_probs=51.4
Q ss_pred CCCcEEEeCCCCe----------EEEEeccCCCcEEEEEEEcCCceEEEEeCCCc--EEEEEccCCC--cceEEeeeecc
Q psy710 187 KTGSLRLLGRPGV----------DAHVRHETDAAVIQMQFLTNEGALITATADDS--LHLWNFRQKR--PEIVHSLKFQR 252 (591)
Q Consensus 187 ~dg~i~i~d~~~~----------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~--i~~wd~~~~~--~~~~~~~~~~~ 252 (591)
..+.|...++.+. +..........+..+.+..+ ..+++...++. +.++++.++. ...+-.+.. .
T Consensus 318 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~l~~~~~~~~~~~l~~~~~~~g~~~~~~~i~lp~-~ 395 (711)
T 4hvt_A 318 KAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKD-RVFLATYDNVVAKVVTFTLENEQWTKPVVLKLPY-Q 395 (711)
T ss_dssp CTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSS-CEEEEEEETTEEEEEEECEETTEECCCEEECCCS-T
T ss_pred CCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECC-EEEEEEEECCEEEEEEEECCCCceEEEeccCCCC-C
Confidence 4566777775442 22233444557788888865 46666666664 5666665541 111112222 2
Q ss_pred ccEEEEEecCCCCEEE-EEeC---CccEEEEEcc
Q psy710 253 ERITYIHLPLQSKWLY-VGTE---KGNIHVVNIE 282 (591)
Q Consensus 253 ~~v~~~~~sp~~~~l~-~~~~---dg~i~i~d~~ 282 (591)
+.+.....++++..++ +.+. -+.+..+|+.
T Consensus 396 ~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~ 429 (711)
T 4hvt_A 396 NAIFGMSSYEEEEEALITIENSIVPPTIYLWVKT 429 (711)
T ss_dssp TCEEEEECCTTCSCEEEEEECSSSCCEEEEECTT
T ss_pred eEEEEEeecCcCCEEEEEEecCCCCCEEEEEeCC
Confidence 4566667777765444 3332 2467777765
No 364
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=69.68 E-value=74 Score=29.83 Aligned_cols=124 Identities=12% Similarity=0.087 Sum_probs=69.0
Q ss_pred CCcEEEEEEE---cC----CceEEEEe-CCCcEEEEEccCCCcceEEeee--------------ec----cccEEEEEec
Q psy710 208 DAAVIQMQFL---TN----EGALITAT-ADDSLHLWNFRQKRPEIVHSLK--------------FQ----RERITYIHLP 261 (591)
Q Consensus 208 ~~~v~~~~~~---~~----~~~l~~~~-~d~~i~~wd~~~~~~~~~~~~~--------------~~----~~~v~~~~~s 261 (591)
...+..+.+. |+ +.+.+.+. ..+.|.++|+.++ +..+.+. +. ...+..++++
T Consensus 151 ~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~--~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLs 228 (381)
T 3q6k_A 151 PTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQ--DSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLG 228 (381)
T ss_dssp GGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTT--EEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEEC
T ss_pred CCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCC--cEEEEccCCCccccCcceEECCEEeEeccCceEEEec
Confidence 3467888887 22 34444443 4567999999877 3222221 11 2468889999
Q ss_pred CC----CCEEEEEeCCccEEEEEccCccccceeeehhhhccccc--cCCCCCeEEEecCCCCCCeEEEEEcCCEEEEEec
Q psy710 262 LQ----SKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCM--KTHPGPIIHLSDNPLDPSKLLLAYETGLVVHWDL 335 (591)
Q Consensus 262 p~----~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~iwd~ 335 (591)
|+ ++.|+.....+ -++|.+.+.-+..... ... ...+ ++....-..+++.+.+|.++++--....|..|+.
T Consensus 229 p~~~~~~~~LYf~plss-~~ly~V~T~~L~~~~~--~~~-v~~~G~kg~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~ 304 (381)
T 3q6k_A 229 DRDSEGNRPAYYLAGSA-IKVYSVNTKELKQKGG--KLN-PELLGNRGKYNDAIALAYDPKTKVIFFAEANTKQVSCWNT 304 (381)
T ss_dssp CCCTTSCCEEEEEESSC-SEEEEEEHHHHSSTTC--CCC-CEEEEECCTTCCEEEEEECTTTCEEEEEESSSSEEEEEET
T ss_pred CCcCCCCeEEEEEECCC-CcEEEEEHHHhhCcch--hhc-eEEeeecCCCCCcceEEEeCCCCeEEEEeccCCeEEEEeC
Confidence 98 77887766554 3455554433321000 000 0011 1111334456665326666777777889999998
Q ss_pred cc
Q psy710 336 KL 337 (591)
Q Consensus 336 ~~ 337 (591)
.+
T Consensus 305 ~~ 306 (381)
T 3q6k_A 305 QK 306 (381)
T ss_dssp TS
T ss_pred CC
Confidence 76
No 365
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=67.16 E-value=92 Score=33.64 Aligned_cols=38 Identities=11% Similarity=0.002 Sum_probs=33.2
Q ss_pred ceEEEEeeCCceEEEEEeCCCcEEEEEeeeeeeeceec
Q psy710 94 RITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYII 131 (591)
Q Consensus 94 ~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~ 131 (591)
.+.+++..++..++++-+.|+++++|++.+++++....
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 46777888888899999999999999999999888765
No 366
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=62.18 E-value=92 Score=28.23 Aligned_cols=194 Identities=13% Similarity=0.101 Sum_probs=104.4
Q ss_pred CCCCcEEEEEeCCCcEEEEcCCCc--------ee--EeeccCCcceEEEEEeecCCEEEEecCCCeEEEEeecccC----
Q psy710 16 DPIQKLLAIGTKTGSLRLLGRPGV--------DA--HVRHETDAAVIQMQFLTNEGALITATADDSLHLWNFRQKR---- 81 (591)
Q Consensus 16 spdg~~la~g~~dg~i~lw~~~~~--------~~--~~~~~h~~~v~~l~~sp~~~~l~s~~~d~~i~vw~~~~~~---- 81 (591)
-++..++++.+.+|.|+--.+..- -. ..+... +.+..+........++..+..|.+.-.....-.
T Consensus 5 i~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lke~-D~l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~~~r 83 (312)
T 1suu_A 5 MQKENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLNDG-DEIVIALCVNTHDYLFMISNEGKLYLINAYEIKDSSR 83 (312)
T ss_dssp ---CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCTT-CCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCC---
T ss_pred cCCCCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccCCC-CEEEEEEEECCCCEEEEEECCCeEEEEEHHHCCCCCc
Confidence 356778899999999988754311 11 122332 445555555555667777788887666554211
Q ss_pred ---cee---eeEEEeeccceEEEEeeC---CceEEEEEeCCCcEEEEEeeeeeeeceecccccccccCCCCCCCceeccC
Q psy710 82 ---PEI---VHSLKFQRERITYIHLPL---QSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLS 152 (591)
Q Consensus 82 ---~~~---~~~~~~~~~~v~~~~~~~---~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (591)
+.. ...+.. .+.|.++...+ +...++..+..|.++...+......+ -. +... +
T Consensus 84 ~~~G~~i~~~l~l~~-~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r-~~-------------G~~~--i- 145 (312)
T 1suu_A 84 ASKGQNISELINLGD-QEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVK-SR-------------GVIV--I- 145 (312)
T ss_dssp ----CBGGGTSCCCT-TCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC------------------CEEC--B-
T ss_pred cCCCcChhhccCCCC-CCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccC-CC-------------cEEE--E-
Confidence 000 011221 23344443322 45678888889998888776532111 00 0000 0
Q ss_pred CCCcCcceeeeccCCCCceEEEECCCCCEEEEEeCCCcEEEeCCCCeE---------EEEeccCCCcEEEEEEEcCCceE
Q psy710 153 DNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGVD---------AHVRHETDAAVIQMQFLTNEGAL 223 (591)
Q Consensus 153 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~---------~~~~~~~~~~v~~~~~~~~~~~l 223 (591)
.+ .....+..+....+...++..+.+|.+..+...... ..........+..+....++..+
T Consensus 146 --------~L--~~~d~lv~~~~~~~~~~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~~~d~vv~~~~v~~~~~l 215 (312)
T 1suu_A 146 --------KL--NDKDFVTSAEIVFKDEKVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLKEGDLFVKVLSVKENPYL 215 (312)
T ss_dssp --------CC--CTTCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCCTTCCEEEEEECTTCSEE
T ss_pred --------ec--CCCCEEEEEEEeCCCCEEEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeCCCCEEEEEEEECCCCeE
Confidence 01 112334444444445568888999988887543211 11112224466666655566678
Q ss_pred EEEeCCCcEEEEEcc
Q psy710 224 ITATADDSLHLWNFR 238 (591)
Q Consensus 224 ~~~~~d~~i~~wd~~ 238 (591)
++.+..|..+..++.
T Consensus 216 ~~vt~~G~~kr~~~~ 230 (312)
T 1suu_A 216 LIVSENGYGKRLNMS 230 (312)
T ss_dssp EEEETTSEEEEEEGG
T ss_pred EEEECCCceEEEEHH
Confidence 888889999888874
No 367
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=60.21 E-value=1.4e+02 Score=29.73 Aligned_cols=59 Identities=7% Similarity=-0.031 Sum_probs=43.3
Q ss_pred CCeEEEecCCCCCCeEEEEEc------------CCEEEEEecccceEEEEec--cCCCeeEEEEeecCCEEEEE
Q psy710 306 GPIIHLSDNPLDPSKLLLAYE------------TGLVVHWDLKLKRAEFRWQ--CSEPIKSVCWHYEGKQFLCS 365 (591)
Q Consensus 306 ~~v~~~~~sp~~~~~l~~~~~------------dg~i~iwd~~~~~~~~~~~--~~~~v~~~~~sp~g~~l~s~ 365 (591)
.....|.|.+ +|.+.+.... ...+..++..++++...+. ....++.++|+||++.|..+
T Consensus 476 nsPDnL~fd~-~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~ 548 (592)
T 4a9v_A 476 NSPDGLGFDK-AGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CCEEEEEECT-TCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CCCCceEECC-CCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEE
Confidence 4567899999 8886663221 2267777888888777664 34678999999999988776
No 368
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=57.71 E-value=1.1e+02 Score=27.65 Aligned_cols=238 Identities=11% Similarity=0.093 Sum_probs=119.8
Q ss_pred CCCcEEEEEeCCCcEEEEcCCCcee----------EeeccCCcceEEEEEeecCCEEEEecCCCeEEEEee---cccC--
Q psy710 17 PIQKLLAIGTKTGSLRLLGRPGVDA----------HVRHETDAAVIQMQFLTNEGALITATADDSLHLWNF---RQKR-- 81 (591)
Q Consensus 17 pdg~~la~g~~dg~i~lw~~~~~~~----------~~~~~h~~~v~~l~~sp~~~~l~s~~~d~~i~vw~~---~~~~-- 81 (591)
|+..++++.+.+|.|+--.+..-.. ..+..+ +.+..+........|+..+..|.+.-... ....
T Consensus 1 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~~ke~-D~l~~~~~~~~~~~ll~fT~~G~~~~~~~~elp~~~~~ 79 (307)
T 1zi0_A 1 TQEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEE-DFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRG 79 (307)
T ss_dssp CCCEEEEEEETTSEEEEEECC---------------------CCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCCCCSS
T ss_pred CCCcEEEEEeCCCEEEEeeHHHhhhhccCCCCceeeeeCCC-CEEEEEEEECCCCEEEEEECCCEEEEEEhhHCcCCCCC
Confidence 4567788899999998765532111 112222 34444444444556666667777554443 2221
Q ss_pred --ceeee---EEEeeccceEEEEee---CCceEEEEEeCCCcEEEEEeeeeeeeceecccccccccCCCCCCCceeccCC
Q psy710 82 --PEIVH---SLKFQRERITYIHLP---LQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSD 153 (591)
Q Consensus 82 --~~~~~---~~~~~~~~v~~~~~~---~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (591)
+..+. .+. ....|.++..- .++.+++..+..|.++-..+........ . -...+
T Consensus 80 a~G~~i~~~l~l~-~~e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~r-~---------------G~~~i-- 140 (307)
T 1zi0_A 80 ARGRPIVNLLPLE-QDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRT-A---------------GKVAI-- 140 (307)
T ss_dssp SCCEEGGGTSCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCCT-T---------------CEESS--
T ss_pred CCCeEhhhccCCC-CCCEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhcccc-C---------------CeEEE--
Confidence 11111 122 22345555332 3456788888999998887654321110 0 00000
Q ss_pred CCcCcceeeeccCCCCceEEEECCCCCEEEEEeCCCcEEEeCCCCe---------EEEEeccCCCcEEEEEEEcCCceEE
Q psy710 154 NPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGV---------DAHVRHETDAAVIQMQFLTNEGALI 224 (591)
Q Consensus 154 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~---------~~~~~~~~~~~v~~~~~~~~~~~l~ 224 (591)
.+. ....+..+....+...++..+.+|.+..++.... ...........|.++...+++..++
T Consensus 141 -------~l~--~~d~lv~~~~~~~~~~i~l~T~~G~~irf~~~~v~~~gr~a~Gv~~i~L~~~d~Vv~~~~~~~~~~ll 211 (307)
T 1zi0_A 141 -------KLV--DGDELIGVDLTSGEDEVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLGEGDKVVSLIVPRGDGAIL 211 (307)
T ss_dssp -------CCC--TTCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEECCCSSCEEE
T ss_pred -------EEC--CCCEEEEEEEeCCCCEEEEECCCCcEEEEEHHHcCccCCCCCCeEeEEeCCCCEEEEEEEecCCCEEE
Confidence 000 1133344444344456778888888877654221 1111222344666665555566788
Q ss_pred EEeCCCcEEEEEccCC----C-cceEEe--eeeccccEEEEEecCCCCEEEEEeCCccEEEEEccC
Q psy710 225 TATADDSLHLWNFRQK----R-PEIVHS--LKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIES 283 (591)
Q Consensus 225 ~~~~d~~i~~wd~~~~----~-~~~~~~--~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~i~d~~~ 283 (591)
+.+..|..+-.++..- + ..-+.. +....+.+-.+....+...++..+.+|.+.-++...
T Consensus 212 ~~T~~G~~Kr~~~~e~~~~~Rg~kG~~~~~~~~~~~~lv~~~~v~~~~~l~~~t~~g~~ir~~~~~ 277 (307)
T 1zi0_A 212 TATQNGYGKRTAVAEYPTKSRATKGVISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSE 277 (307)
T ss_dssp EEETTSEEEEECGGGSCCCCTTSCCEESSCCCTTTCSEEEEEEECTTCEEEEEESSCCEEEEEGGG
T ss_pred EEEcCCceEEEEHHHhccCCCCCCCEEeeEecCCCCeEEEEEEeCCCceEEEEcCCCcEEEEeccc
Confidence 8888899888877321 1 011222 222224454444333345566677788777777655
No 369
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=56.00 E-value=2e+02 Score=30.19 Aligned_cols=60 Identities=17% Similarity=-0.000 Sum_probs=37.5
Q ss_pred CCCCcEEEeCCCC-cEEEEEeCCCcEEEEcCCCceeEeeccC-------CcceEEEEEeecC-CEEEEe
Q psy710 7 PYQPTAIAFDPIQ-KLLAIGTKTGSLRLLGRPGVDAHVRHET-------DAAVIQMQFLTNE-GALITA 66 (591)
Q Consensus 7 ~~~v~~~~~spdg-~~la~g~~dg~i~lw~~~~~~~~~~~~h-------~~~v~~l~~sp~~-~~l~s~ 66 (591)
.+.|.+|+++|.. ..+.+++..+.|...+=.+..-..+..+ ...|.++++.|.. +.++.+
T Consensus 14 ~g~i~~i~~~p~~~~~~~a~~~~ggv~rS~DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~ 82 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDLLYARTDIGGAYRWDAGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLA 82 (789)
T ss_dssp CSCEEEEEECSSSTTCEEEEESSSCEEEEETTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEE
T ss_pred CCcEEEEEECCCCCCEEEEEecCCCEEEecCCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEE
Confidence 4589999999963 4555666666666655445444444332 2469999999843 344443
No 370
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=53.77 E-value=1.4e+02 Score=27.87 Aligned_cols=199 Identities=15% Similarity=0.081 Sum_probs=93.2
Q ss_pred CCEEEEecCCCeEEEEeeccc-C-----ceeee---EEEe-eccceEEEEeeCCceEEEEEeCCCcEEEEEeeeeeeece
Q psy710 60 EGALITATADDSLHLWNFRQK-R-----PEIVH---SLKF-QRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGY 129 (591)
Q Consensus 60 ~~~l~s~~~d~~i~vw~~~~~-~-----~~~~~---~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~ 129 (591)
....+.-..||.|..|-.... + ..... .+.. ....+..++++.-....+.-..||.|+.|-....-.+..
T Consensus 62 ~~~~~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~~~~v~i~~G~~h~~al~~~G~v~~wG~n~~GqLG~ 141 (389)
T 3kci_A 62 EQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH 141 (389)
T ss_dssp TTEEEEEETTSCEEEEECCGGGTTSSSSSCCEEEEEECGGGTTSCEEEEEECTTCSEEEEEETTSCEEEEECCGGGTTCS
T ss_pred CCeEEEEcCCCcEEEEECCCCCCCCCCCcCCccCCEEcccccCCceeEEEECcCCCeEEEEcCCCCEEEEeCCCCCcCCC
Confidence 345555567888888865321 1 00011 1111 112344456655556666667889999996544111000
Q ss_pred ecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCCCCEEEEEeCCCcEEEeCCCC-----------
Q psy710 130 IINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPG----------- 198 (591)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~----------- 198 (591)
-. . .....+ ..+..-....|..++.. ....++-..+|.|+.|....
T Consensus 142 g~----~----------------~~~~~p-~~v~~l~~~~i~~va~G--~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~ 198 (389)
T 3kci_A 142 GN----R----------------SPCDRP-RVIESLRGIEVVDVAAG--GAHSACVTAAGDLYTWGKGRYGRLGHSDSED 198 (389)
T ss_dssp SS----C----------------CCEEEE-EECGGGTTSCEEEEEEC--SSEEEEEETTSCEEEEECCGGGTTCSSSCCC
T ss_pred CC----C----------------ccCcCC-eEecccCCCeEEEEEeC--cCeEEEEeCCCeEEEeCCCCCCCcCCCCCcc
Confidence 00 0 000000 00000011234444443 33455556788888885321
Q ss_pred e-EEEEe-ccCCCcEEEEEEEcCCceEEEEeCCCcEEEEEccCC--------Ccc-eEEeeee-ccccEEEEEecCCCCE
Q psy710 199 V-DAHVR-HETDAAVIQMQFLTNEGALITATADDSLHLWNFRQK--------RPE-IVHSLKF-QRERITYIHLPLQSKW 266 (591)
Q Consensus 199 ~-~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~--------~~~-~~~~~~~-~~~~v~~~~~sp~~~~ 266 (591)
. ..... ......+..++........++...||.|+.|-.... ... ....+.. ....|..++.. ..+
T Consensus 199 ~~~p~~v~~~~~~~v~~ia~G~g~~~t~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~v~~v~~G--~~h 276 (389)
T 3kci_A 199 QLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECG--SQF 276 (389)
T ss_dssp EEEEEECGGGTTSCEEEEEECCSSCEEEEEETTTEEEEEECCGGGTTSSSSCCCEEEEEECGGGTTSCEEEEEEE--TTE
T ss_pred cccceEecccCCCeEEEEEEcCCCcEEEEEccCCEEEEEeCCCCCCCCCCCCCCccccEEecccCCCcEEEEeCC--CCE
Confidence 0 11111 111335666665433355666678899999965421 000 1111111 11235555553 334
Q ss_pred EEEEeCCccEEEEEccC
Q psy710 267 LYVGTEKGNIHVVNIES 283 (591)
Q Consensus 267 l~~~~~dg~i~i~d~~~ 283 (591)
.++-..+|.|+.|-...
T Consensus 277 s~alt~~G~v~~wG~n~ 293 (389)
T 3kci_A 277 SVALTKSGAVYTWGKGD 293 (389)
T ss_dssp EEEEETTSCEEEEECCG
T ss_pred EEEEeCCCeEEEEeCCC
Confidence 44457889999997654
No 371
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=49.91 E-value=1.7e+02 Score=27.44 Aligned_cols=245 Identities=9% Similarity=0.043 Sum_probs=129.7
Q ss_pred CCcEEEe-CCCCcEEEEEeC--C---CcEEEEcCC--------Ccee-Eeecc-----CCcceEEEEEeecCCEEE--Ee
Q psy710 9 QPTAIAF-DPIQKLLAIGTK--T---GSLRLLGRP--------GVDA-HVRHE-----TDAAVIQMQFLTNEGALI--TA 66 (591)
Q Consensus 9 ~v~~~~~-spdg~~la~g~~--d---g~i~lw~~~--------~~~~-~~~~~-----h~~~v~~l~~sp~~~~l~--s~ 66 (591)
-.+.+++ +.+|+++++--+ + -++-..+.. +..+ .-+.. +--.|..+...+.+++-+ +|
T Consensus 27 ~P~gv~vd~~~gRiFvt~PR~~~gvp~TL~~v~~~~~~~~~~~~p~ll~PYP~w~~~~~lvsV~~v~iD~~~rLWVLDtG 106 (381)
T 3q6k_A 27 ISTAFAYDAEGEKLFLAVPRKLPRVPYTLAEVDTKNSLGVKGKHSPLLNKFSGHKTGKELTSIYQPVIDDCRRLWVVDIG 106 (381)
T ss_dssp CCCEEEEETTTTEEEEECCTTSTTCSCSEEEEEHHHHTTCTTCSSCCBEECTTCSSSCSSSCEEEEEECTTCEEEEEECS
T ss_pred ceeeeeeecCCCcEEEEeCCCCCCCCcEEEEEeCCCCcccccCCcccccCCCCCccccceEEeeEEEEcCCCcEEEEeCC
Confidence 3567888 788888776532 2 234444322 1123 33322 224677777777665433 22
Q ss_pred cC-------------CCeEEEEeeccc--CceeeeEEEee------ccceEEEEee---CC----ceEEEEEe-CCCcEE
Q psy710 67 TA-------------DDSLHLWNFRQK--RPEIVHSLKFQ------RERITYIHLP---LQ----SKWLYVGT-EKGNIH 117 (591)
Q Consensus 67 ~~-------------d~~i~vw~~~~~--~~~~~~~~~~~------~~~v~~~~~~---~~----~~~l~~~~-~d~~i~ 117 (591)
-- --.|.+||+.++ + .++.+... ...+..+.+. |+ +.+++.+. ..+.|.
T Consensus 107 ~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~--li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLI 184 (381)
T 3q6k_A 107 SVEYRSRGAKDYPSHRPAIVAYDLKQPNYP--EVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALF 184 (381)
T ss_dssp SCSSCSTTGGGSCCCCCEEEEEESSSTTCC--EEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEE
T ss_pred CcCcCCCccccCCCCCceEEEEECCCCCce--eEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEE
Confidence 11 126788999987 5 45555433 2346777776 22 34555544 367899
Q ss_pred EEEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCC----CCEEEEEeCCCc-EE
Q psy710 118 VVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPI----QKLLAIGTKTGS-LR 192 (591)
Q Consensus 118 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~----~~~l~~~~~dg~-i~ 192 (591)
++|+.+++.-+.+.... .++......+....+ .....+..++++|+ ++.|......+. ++
T Consensus 185 Vydl~~~~swRv~~~~~-------~pd~~~~~~i~G~~~--------~~~~Gi~gIaLsp~~~~~~~~LYf~plss~~ly 249 (381)
T 3q6k_A 185 IYDHKKQDSWNVTHPTF-------KAERPTKFDYGGKEY--------EFKAGIFGITLGDRDSEGNRPAYYLAGSAIKVY 249 (381)
T ss_dssp EEETTTTEEEEEECGGG-------SCCSCEEEEETTEEE--------EECCCEEEEEECCCCTTSCCEEEEEESSCSEEE
T ss_pred EEECCCCcEEEEccCCC-------ccccCcceEECCEEe--------EeccCceEEEecCCcCCCCeEEEEEECCCCcEE
Confidence 99999988776653111 122111111111111 01356889999998 677776665552 33
Q ss_pred EeC------C---CCeEEEEeccCCCcEEEEEEE-cCCceEEEEeCCCcEEEEEccC-C-CcceEEeeeec--cccEEEE
Q psy710 193 LLG------R---PGVDAHVRHETDAAVIQMQFL-TNEGALITATADDSLHLWNFRQ-K-RPEIVHSLKFQ--RERITYI 258 (591)
Q Consensus 193 i~d------~---~~~~~~~~~~~~~~v~~~~~~-~~~~~l~~~~~d~~i~~wd~~~-~-~~~~~~~~~~~--~~~v~~~ 258 (591)
-.. . ...+..........-..+++. .+|..+++--..+.|..|+..+ . .+.....+... -..+..+
T Consensus 250 ~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~d~~l~~pd~~ 329 (381)
T 3q6k_A 250 SVNTKELKQKGGKLNPELLGNRGKYNDAIALAYDPKTKVIFFAEANTKQVSCWNTQKMPLRMKNTDVVYTSSRFVFGTDI 329 (381)
T ss_dssp EEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEECTTTCEEEEEESSSSEEEEEETTSCSBCGGGEEEEEECTTCCSEEEE
T ss_pred EEEHHHhhCcchhhceEEeeecCCCCCcceEEEeCCCCeEEEEeccCCeEEEEeCCCCccccCceEEEEECCCccccCeE
Confidence 221 1 111111111111344456665 5677777777888999999876 2 11122222221 1235667
Q ss_pred EecCCCCEEEEE
Q psy710 259 HLPLQSKWLYVG 270 (591)
Q Consensus 259 ~~sp~~~~l~~~ 270 (591)
.+.++|.+.+..
T Consensus 330 ~i~~~g~Lwv~s 341 (381)
T 3q6k_A 330 SVDSKGGLWFMS 341 (381)
T ss_dssp EECTTSCEEEEE
T ss_pred EECCCCeEEEEE
Confidence 776666544443
No 372
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=49.04 E-value=65 Score=35.70 Aligned_cols=37 Identities=11% Similarity=0.011 Sum_probs=30.6
Q ss_pred CeeEEEEeecCCEEEEEecCCcEEEEecCCCCCceeee
Q psy710 349 PIKSVCWHYEGKQFLCSHTDGTISTWAVRPLAKPVSVN 386 (591)
Q Consensus 349 ~v~~~~~sp~g~~l~s~~~dg~i~vwd~~~~~~~~~~~ 386 (591)
.+.+++..++..++++-+.|+++|+|++. +++++.+.
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~-t~~~v~t~ 275 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLS-TNQCVETI 275 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETT-TTEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECC-CCCeEEee
Confidence 45566777788999999999999999999 77776653
No 373
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=46.94 E-value=1.7e+02 Score=26.64 Aligned_cols=203 Identities=12% Similarity=0.118 Sum_probs=104.0
Q ss_pred ecCCEEEEecCCCeEEEEeecccCc--eeeeEEEeeccceEEEEeeCCceEEEEEeCCCcEEEEEeeeeeeeceeccccc
Q psy710 58 TNEGALITATADDSLHLWNFRQKRP--EIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNK 135 (591)
Q Consensus 58 p~~~~l~s~~~d~~i~vw~~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~ 135 (591)
|+..++++.+.+|.|+--.+..-+. .....++.. +.+..+........|+..+..|.++-+....-......
T Consensus 3 ~~e~~~v~lT~~G~IKr~~~~~~~~~~~~~~~lke~-D~l~~~~~~~t~d~ll~fT~~Gr~~~~~~~elp~~~r~----- 76 (323)
T 1wp5_A 3 ASEDVIVTVTKDGYVKRTSLRSYAASNGQDFAMKDT-DRLLAMLEMNTKDVLLLFTNKGNYLYCPVHELPDIRWK----- 76 (323)
T ss_dssp SCCEEEEEEETTCEEEEEEHHHHHHTTTCCCCCCTT-CCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCTT-----
T ss_pred cCCcEEEEEeCCCEEEEeEHHHhhhcCccccccCCC-CEEEEEEEECCCCEEEEEECCCEEEEEEHHHCcCCCCC-----
Confidence 5667788889999998776542210 011122222 33444444444555666667777666554431100000
Q ss_pred ccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEE-EECC--CCCEEEEEeCCCcEEEeCCC--------CeEEEEe
Q psy710 136 AIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAI-AFDP--IQKLLAIGTKTGSLRLLGRP--------GVDAHVR 204 (591)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~~~--~~~~l~~~~~dg~i~i~d~~--------~~~~~~~ 204 (591)
..+..+. +.+.......|..+ ...+ ++.+++..+.+|.++...+. .+.....
T Consensus 77 -------a~G~~i~----------~~i~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~iKrt~l~e~~~~~r~~G~~ai~ 139 (323)
T 1wp5_A 77 -------DLGQHIA----------NIIPIDRDEEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGIN 139 (323)
T ss_dssp -------SCCEEGG----------GTSCCCTTCCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSC
T ss_pred -------CCCcChh----------hccCCCCCCEEEEEEEecccCCCceEEEEeCCCeEEEeEHHHhhhccccCceEEEE
Confidence 0000000 00000112234433 3332 25678899999999986542 1111112
Q ss_pred ccCCCcEEEEEEEcCCceEEEEeCCCcEEEEEccCCC-----cceEEeeee-ccccEEEEEecCCCC-EEEEEeCCccEE
Q psy710 205 HETDAAVIQMQFLTNEGALITATADDSLHLWNFRQKR-----PEIVHSLKF-QRERITYIHLPLQSK-WLYVGTEKGNIH 277 (591)
Q Consensus 205 ~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~-----~~~~~~~~~-~~~~v~~~~~sp~~~-~l~~~~~dg~i~ 277 (591)
......+..+........++..+.+|.+..+....-. ..-+.-+.. ....|.++..-+++. .+++.+..|..+
T Consensus 140 l~e~d~lv~~~~~~~~~~i~l~T~~G~~irf~~~ev~~~gR~a~GV~~i~L~~~d~Vv~~~~~~~~~~~ll~vt~~G~gK 219 (323)
T 1wp5_A 140 LKNDDQVVDVHLTDGMNELFLVTHNGYALWFDESEVSIVGVRAAGVKGMNLKEGDYIVSGQLITSKDESIVVATQRGAVK 219 (323)
T ss_dssp CCTTCCEEEEEEECSCSEEEEEETTSEEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEECCTTCEEEEEETTSEEE
T ss_pred eCCCCEEEEEEEeCCCCEEEEEeCCCcEEEEEHHHCcccCCCCcCEEEEEeCCCCEEEEEEEEcCCCcEEEEEECCCceE
Confidence 2223566666666566678888888988888774210 111222221 224455554434444 688888899888
Q ss_pred EEEccC
Q psy710 278 VVNIES 283 (591)
Q Consensus 278 i~d~~~ 283 (591)
..++..
T Consensus 220 r~~~~e 225 (323)
T 1wp5_A 220 KMKLTE 225 (323)
T ss_dssp EEEGGG
T ss_pred EEEHHH
Confidence 877765
No 374
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=46.38 E-value=48 Score=36.74 Aligned_cols=38 Identities=13% Similarity=-0.032 Sum_probs=31.3
Q ss_pred CeEEEecCCCCCCeEEEEEcCCEEEEEecccceEEEEec
Q psy710 307 PIIHLSDNPLDPSKLLLAYETGLVVHWDLKLKRAEFRWQ 345 (591)
Q Consensus 307 ~v~~~~~sp~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 345 (591)
.+.+++..+ +..++++-+.|+++|+|++.+++++....
T Consensus 239 ~~vs~~~~~-~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 239 TIISMIFLS-TYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp CBSCCEEET-TTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eeEEeeccC-CccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 344555666 77899999999999999999999988765
No 375
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=46.34 E-value=1.6e+02 Score=26.10 Aligned_cols=203 Identities=10% Similarity=0.029 Sum_probs=113.4
Q ss_pred CceEEEECCCCCEEEEEeCCCcEEEeC---CCCeEEEEeccCCCcEEEEEEEc--CCceEEEEeCCCcEEEEEccCCC--
Q psy710 169 QPTAIAFDPIQKLLAIGTKTGSLRLLG---RPGVDAHVRHETDAAVIQMQFLT--NEGALITATADDSLHLWNFRQKR-- 241 (591)
Q Consensus 169 ~v~~~~~~~~~~~l~~~~~dg~i~i~d---~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~~wd~~~~~-- 241 (591)
.+..+........|+.-+..|.++... ++.............|..+.. + +...++..+.+|.++-..+..-.
T Consensus 25 ~~~~~~~~~t~~~ll~fT~~G~v~~~~~~~lp~~~~~~ll~~~e~i~~v~~-~~~~~~~~v~~T~~G~iKr~~l~~~~~~ 103 (276)
T 3no0_A 25 PVVNILRVPFTEGLFLVSNRGRVYWIAGSQALQGSKVSLKSREEKIVGAFI-REKFGNRLLLATKKGYVKKIPLAEFEYK 103 (276)
T ss_dssp CEEEEEEEETTSCEEEEETTSEEEEECSHHHHTSEECCCSSTTCCEEEEEE-GGGSCSEEEEEETTSEEEEEEGGGTTTC
T ss_pred eEEEEEEECCCCEEEEEcCCCeEEEEEhhhCccCcccccCCCCCEEEEEEC-CcCCCCEEEEEeCCCEEEEEEHHHhhhh
Confidence 344444444445577777888877643 221111001333456766654 4 46789999999999998875431
Q ss_pred --cceEEeeeeccccEEEEEecCCCCEEEEEeCCccEEEEEccCccccceeeehhhhccccccCCCCCeEEEecCCCCCC
Q psy710 242 --PEIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPS 319 (591)
Q Consensus 242 --~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~ 319 (591)
......+.. .+.+..+........++..+.+|.+..++...-...+..-. -.....+.. ...|..+...+ ++.
T Consensus 104 ~~G~~~i~lke-gD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~--Gv~~i~L~~-~d~vv~~~~~~-~~~ 178 (276)
T 3no0_A 104 AQGMPIIKLTE-GDEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGAR--GVQGIKLEK-NDETSGLRIWN-GEP 178 (276)
T ss_dssp STTEECSCCCT-TCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCC--CEECCCCCT-TCCEEEEEEES-SCS
T ss_pred cCCeEEEecCC-CCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCC--CEEEEccCC-CCEEEEEEEeC-CCC
Confidence 111112222 24555555555666788889999998888654332110000 000011222 34566665555 567
Q ss_pred eEEEEEcCCEEEEEeccc-------ceEEEEeccCCCeeEEEEeecCCEEEEEecCCcEEE--EecC
Q psy710 320 KLLLAYETGLVVHWDLKL-------KRAEFRWQCSEPIKSVCWHYEGKQFLCSHTDGTIST--WAVR 377 (591)
Q Consensus 320 ~l~~~~~dg~i~iwd~~~-------~~~~~~~~~~~~v~~~~~sp~g~~l~s~~~dg~i~v--wd~~ 377 (591)
.++..+..|.++...+.. ++-...+...+.+..+....+...++..+.+|.+.. ++..
T Consensus 179 ~ll~~T~~G~~kr~~~~e~~~~~R~gkGv~~i~~~~~lv~~~~~~~~~~i~~~t~~G~~ir~~~~~~ 245 (276)
T 3no0_A 179 YLLVITAKGRVKKISHEEIPKTNRGVKGTEVSGTKDTLVDLIPIKEEVELLITTKNGKAFYDKINQK 245 (276)
T ss_dssp EEEEEETTSCEEEEEGGGSCCCCTTCCCEECCCSSSCEEEEEEESSEEEEEEEETTSCEEEEEEEGG
T ss_pred EEEEEeCCCcEEEeEHHHcccCCCCCcceEEEcCCCcEEEEEEeCCCCEEEEEcCCCeEEEeeeCHH
Confidence 888999999998887653 111222233445555443333446666777888777 7765
No 376
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=44.31 E-value=1.7e+02 Score=25.88 Aligned_cols=205 Identities=12% Similarity=0.078 Sum_probs=113.2
Q ss_pred CcceEEEEEeecCCEEEEecCCCeEEE---EeecccCceeeeEEEeeccceEEEEeeC-CceEEEEEeCCCcEEEEEeee
Q psy710 48 DAAVIQMQFLTNEGALITATADDSLHL---WNFRQKRPEIVHSLKFQRERITYIHLPL-QSKWLYVGTEKGNIHVVNIES 123 (591)
Q Consensus 48 ~~~v~~l~~sp~~~~l~s~~~d~~i~v---w~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~vwd~~~ 123 (591)
.+.+..+.-.....+|+.-+.+|.++- |++......-+ +. ....|..+.... +...++..+.+|.++-..+..
T Consensus 23 gD~~~~~~~~~t~~~ll~fT~~G~v~~~~~~~lp~~~~~~l--l~-~~e~i~~v~~~~~~~~~~v~~T~~G~iKr~~l~~ 99 (276)
T 3no0_A 23 KAPVVNILRVPFTEGLFLVSNRGRVYWIAGSQALQGSKVSL--KS-REEKIVGAFIREKFGNRLLLATKKGYVKKIPLAE 99 (276)
T ss_dssp CCCEEEEEEEETTSCEEEEETTSEEEEECSHHHHTSEECCC--SS-TTCCEEEEEEGGGSCSEEEEEETTSEEEEEEGGG
T ss_pred CCeEEEEEEECCCCEEEEEcCCCeEEEEEhhhCccCccccc--CC-CCCEEEEEECCcCCCCEEEEEeCCCEEEEEEHHH
Confidence 345666655555556666666776654 44433211111 22 234565553321 467888899999999888765
Q ss_pred eeeeceecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEEECCCCCEEEEEeCCCcEEEeCCCC-----
Q psy710 124 FTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPG----- 198 (591)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~----- 198 (591)
.. ... .+ ...+.......+..+........++..+..|.++.+....
T Consensus 100 ~~-~~~-~G--------------------------~~~i~lkegD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~g 151 (276)
T 3no0_A 100 FE-YKA-QG--------------------------MPIIKLTEGDEVVSIASSVDETHILLFTKKGRVARFSVREVPPST 151 (276)
T ss_dssp TT-TCS-TT--------------------------EECSCCCTTCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCC
T ss_pred hh-hhc-CC--------------------------eEEEecCCCCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcC
Confidence 32 100 00 0000001123344555555556788888899887775321
Q ss_pred ----eEEEEeccCCCcEEEEEEEcCCceEEEEeCCCcEEEEEccCC-----CcceEEeeeeccccEEEEEecCCCCEEEE
Q psy710 199 ----VDAHVRHETDAAVIQMQFLTNEGALITATADDSLHLWNFRQK-----RPEIVHSLKFQRERITYIHLPLQSKWLYV 269 (591)
Q Consensus 199 ----~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~-----~~~~~~~~~~~~~~v~~~~~sp~~~~l~~ 269 (591)
+...........|..+...+++..++..+..|.++...+..- ..+-+..+ ...+.+..+....+...++.
T Consensus 152 R~a~Gv~~i~L~~~d~vv~~~~~~~~~~ll~~T~~G~~kr~~~~e~~~~~R~gkGv~~i-~~~~~lv~~~~~~~~~~i~~ 230 (276)
T 3no0_A 152 PGARGVQGIKLEKNDETSGLRIWNGEPYLLVITAKGRVKKISHEEIPKTNRGVKGTEVS-GTKDTLVDLIPIKEEVELLI 230 (276)
T ss_dssp TTCCCEECCCCCTTCCEEEEEEESSCSEEEEEETTSCEEEEEGGGSCCCCTTCCCEECC-CSSSCEEEEEEESSEEEEEE
T ss_pred CCCCCEEEEccCCCCEEEEEEEeCCCCEEEEEeCCCcEEEeEHHHcccCCCCCcceEEE-cCCCcEEEEEEeCCCCEEEE
Confidence 111112223456777766667778889999999998887432 11223333 22344544433334456777
Q ss_pred EeCCccEEE--EEccCc
Q psy710 270 GTEKGNIHV--VNIESF 284 (591)
Q Consensus 270 ~~~dg~i~i--~d~~~~ 284 (591)
.+.+|.+.. ++...-
T Consensus 231 ~t~~G~~ir~~~~~~~i 247 (276)
T 3no0_A 231 TTKNGKAFYDKINQKDI 247 (276)
T ss_dssp EETTSCEEEEEEEGGGS
T ss_pred EcCCCeEEEeeeCHHHC
Confidence 788888888 877653
No 377
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=43.82 E-value=93 Score=31.01 Aligned_cols=59 Identities=12% Similarity=0.182 Sum_probs=41.2
Q ss_pred CCceEEEECCCCCEEEEEeC------------CCcEEEeCCCCeEEEEecc--CCCcEEEEEEEcCCceEEEE
Q psy710 168 YQPTAIAFDPIQKLLAIGTK------------TGSLRLLGRPGVDAHVRHE--TDAAVIQMQFLTNEGALITA 226 (591)
Q Consensus 168 ~~v~~~~~~~~~~~l~~~~~------------dg~i~i~d~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~ 226 (591)
..+..|+|+++|.+.+.... ...+..++..++++..... ....++.++|+||++.|+++
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~ 548 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEE
Confidence 44688999999986663221 1257777776666554432 24578999999999988776
No 378
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=43.56 E-value=1.9e+02 Score=26.29 Aligned_cols=239 Identities=14% Similarity=0.172 Sum_probs=123.7
Q ss_pred CCCcEEEEEeCCCcEEEEcCC-----CceeEeeccCCcceEEEEEeecCCEEEEecCCCeEEEEee---cccC----cee
Q psy710 17 PIQKLLAIGTKTGSLRLLGRP-----GVDAHVRHETDAAVIQMQFLTNEGALITATADDSLHLWNF---RQKR----PEI 84 (591)
Q Consensus 17 pdg~~la~g~~dg~i~lw~~~-----~~~~~~~~~h~~~v~~l~~sp~~~~l~s~~~d~~i~vw~~---~~~~----~~~ 84 (591)
|+..++++.+.+|.|+--.+. +.....+... +.+..+........|+..+..|.+.-... .... +..
T Consensus 3 ~~e~~~v~lT~~G~IKr~~~~~~~~~~~~~~~lke~-D~l~~~~~~~t~d~ll~fT~~Gr~~~~~~~elp~~~r~a~G~~ 81 (323)
T 1wp5_A 3 ASEDVIVTVTKDGYVKRTSLRSYAASNGQDFAMKDT-DRLLAMLEMNTKDVLLLFTNKGNYLYCPVHELPDIRWKDLGQH 81 (323)
T ss_dssp SCCEEEEEEETTCEEEEEEHHHHHHTTTCCCCCCTT-CCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCTTSCCEE
T ss_pred cCCcEEEEEeCCCEEEEeEHHHhhhcCccccccCCC-CEEEEEEEECCCCEEEEEECCCEEEEEEHHHCcCCCCCCCCcC
Confidence 667788899999999876533 1111223333 34444444445556666667777554443 2221 111
Q ss_pred ee---EEEeeccceEEEEeeC---CceEEEEEeCCCcEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCCCcCc
Q psy710 85 VH---SLKFQRERITYIHLPL---QSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNPLDP 158 (591)
Q Consensus 85 ~~---~~~~~~~~v~~~~~~~---~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (591)
+. .+. ....|.++..-+ ++.+++.++..|.++...+........ . .-...+
T Consensus 82 i~~~i~L~-~~e~Iv~~~~~~~~~~~~~ll~~T~~G~iKrt~l~e~~~~~r-~--------------~G~~ai------- 138 (323)
T 1wp5_A 82 IANIIPID-RDEEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRY-S--------------KPLTGI------- 138 (323)
T ss_dssp GGGTSCCC-TTCCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCC-S--------------SCEECS-------
T ss_pred hhhccCCC-CCCEEEEEEEecccCCCceEEEEeCCCeEEEeEHHHhhhccc-c--------------CceEEE-------
Confidence 11 121 123455443323 256788889999999888765332110 0 000000
Q ss_pred ceeeeccCCCCceEEEECCCCCEEEEEeCCCcEEEeCCCCeE---------EEEeccCCCcEEEEEEEcCCc-eEEEEeC
Q psy710 159 SKTFRHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGVD---------AHVRHETDAAVIQMQFLTNEG-ALITATA 228 (591)
Q Consensus 159 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~---------~~~~~~~~~~v~~~~~~~~~~-~l~~~~~ 228 (591)
.+ .....+..+........++..+.+|.+..+...... ..........|.++...+++. .+++.+.
T Consensus 139 --~l--~e~d~lv~~~~~~~~~~i~l~T~~G~~irf~~~ev~~~gR~a~GV~~i~L~~~d~Vv~~~~~~~~~~~ll~vt~ 214 (323)
T 1wp5_A 139 --NL--KNDDQVVDVHLTDGMNELFLVTHNGYALWFDESEVSIVGVRAAGVKGMNLKEGDYIVSGQLITSKDESIVVATQ 214 (323)
T ss_dssp --CC--CTTCCEEEEEEECSCSEEEEEETTSEEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEECCTTCEEEEEET
T ss_pred --Ee--CCCCEEEEEEEeCCCCEEEEEeCCCcEEEEEHHHCcccCCCCcCEEEEEeCCCCEEEEEEEEcCCCcEEEEEEC
Confidence 00 011333444444445567888888888777543211 111122244566665555555 7888888
Q ss_pred CCcEEEEEccCC-----CcceEEeee---eccccEEEEEecCCCCEEEEEeCCccEEEEEccC
Q psy710 229 DDSLHLWNFRQK-----RPEIVHSLK---FQRERITYIHLPLQSKWLYVGTEKGNIHVVNIES 283 (591)
Q Consensus 229 d~~i~~wd~~~~-----~~~~~~~~~---~~~~~v~~~~~sp~~~~l~~~~~dg~i~i~d~~~ 283 (591)
.|..+..++..- ..+-+..+. .....+..+....++..++..+.+|.+..+++..
T Consensus 215 ~G~gKr~~~~e~~~~~Rg~kGv~~~~~~~~~~~~l~~~~~v~~~~~i~~it~~g~~ir~~~~~ 277 (323)
T 1wp5_A 215 RGAVKKMKLTEFEKATRAKRGVVILRELKANPHRISGFVVAQDSDTIYLQTEKSFIETIKVGD 277 (323)
T ss_dssp TSEEEEEEGGGSCCCCTTSCCEECSCCCSSSCCCEEEEEEECTTCEEEEEETTSCEEEEEGGG
T ss_pred CCceEEEEHHHccccCCCCCCEECeeecCCCCceEEEEEEeCCCCeEEEEeCCCeEEEEEhhh
Confidence 898888777531 011222222 2222454333223344566677788877777655
No 379
>1zvt_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA bindi topology; 1.70A {Escherichia coli}
Probab=43.03 E-value=1.7e+02 Score=25.53 Aligned_cols=148 Identities=10% Similarity=0.036 Sum_probs=81.3
Q ss_pred eEEEEeCCCcEEEEEccCCCcceEEeeeeccccEEEEEecCCCCEEEEEeCCccEEEEEccCc---cccceeeehhhhcc
Q psy710 222 ALITATADDSLHLWNFRQKRPEIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESF---TLSGYIINWNKAID 298 (591)
Q Consensus 222 ~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~i~d~~~~---~~~~~~~~~~~~~~ 298 (591)
.+++.+.+|.|+--.........+ .+... +.+..+........|+..+..|.++-+....- +..+..+ .. .
T Consensus 4 v~v~lT~~G~iKr~~~~~~~~~~~-~lke~-D~l~~~~~~~t~~~ll~~T~~Gr~~~~~~~elp~~r~~G~~i--~~--~ 77 (256)
T 1zvt_A 4 VTIVLSQMGWVRSAKGHDIDAPGL-NYKAG-DSFKAAVKGKSNQPVVFVDSTGRSYAIDPITLPSARGQGEPL--TG--K 77 (256)
T ss_dssp EEEEEETTSEEEEEESSCCCSTTS-CCCTT-CCEEEEEEEETTSCEEEEETTSEEEEECGGGSCCSSSCCEEG--GG--T
T ss_pred EEEEEeCCCEEEEeeCCcCCceec-cCCCC-CEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCCCcCCCCeEe--ee--e
Confidence 455667777776555433210111 12222 33444333334445666778888777665432 1111000 00 1
Q ss_pred ccccCCCCCeEEEecCCCCCCeEEEEEcCCEEEEEeccc-------ceEEEEeccCCCeeEEEEe-ecCCEEEEEecCCc
Q psy710 299 VCMKTHPGPIIHLSDNPLDPSKLLLAYETGLVVHWDLKL-------KRAEFRWQCSEPIKSVCWH-YEGKQFLCSHTDGT 370 (591)
Q Consensus 299 ~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~iwd~~~-------~~~~~~~~~~~~v~~~~~s-p~g~~l~s~~~dg~ 370 (591)
..+. ....|.++.... ++.+|+.++..|.++...+.. +.....+...+.+..+... .++..++..+.+|.
T Consensus 78 i~L~-~~e~Iv~~~~~~-~~~~lll~T~~G~~Kr~~~~e~~~~~r~G~~~i~L~~~d~lv~~~~~~~~~~~i~l~T~~G~ 155 (256)
T 1zvt_A 78 LTLP-PGATVDHMLMES-DDQKLLMASDAGYGFVCTFNDLVARNRAGKALITLPENAHVMPPVVIEDASDMLLAITQAGR 155 (256)
T ss_dssp CCCC-TTCCEEEEECCC-TTCEEEEEBTTSEEEEEEGGGGCCCSTTCEECBCCCTTCCBCCCEECCCTTCEEEEEETTSE
T ss_pred ecCC-CCCEEEEEEEeC-CCCEEEEEeCCCeEEEeEHHHhcccCcCceEEEEECCCCEEEEEEEecCCCCEEEEEcCCCe
Confidence 1122 234677765544 567788999999999988754 2222223334556655555 34567888899999
Q ss_pred EEEEecC
Q psy710 371 ISTWAVR 377 (591)
Q Consensus 371 i~vwd~~ 377 (591)
+..+++.
T Consensus 156 ~lrf~~~ 162 (256)
T 1zvt_A 156 MLMFPVS 162 (256)
T ss_dssp EEEEEGG
T ss_pred EEEEEHH
Confidence 8888887
No 380
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=42.84 E-value=2.1e+02 Score=26.62 Aligned_cols=207 Identities=12% Similarity=0.141 Sum_probs=106.8
Q ss_pred eecCCEEEEecCCCeEEEEeeccc-------CceeeeEEEeeccceEEEEeeCCceEEEEEeCCCcEEEEEeeeeeeece
Q psy710 57 LTNEGALITATADDSLHLWNFRQK-------RPEIVHSLKFQRERITYIHLPLQSKWLYVGTEKGNIHVVNIESFTLSGY 129 (591)
Q Consensus 57 sp~~~~l~s~~~d~~i~vw~~~~~-------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~ 129 (591)
-|+..++++.+.+|.|+--.+..- ++.....++. ...+..+........|+..+..|.++-+....-.....
T Consensus 4 I~~e~~~v~lT~~GyIKr~~l~~y~~~~r~g~g~~~~~lke-~D~l~~~~~~~t~d~ll~fT~~G~~~~~~~~eip~~~r 82 (370)
T 3l6v_A 4 IAPEDVVVTLSHAGYAKRQPVSAYRAQRRGGRGRSAASTKE-EDFIDQLWLVNTHDTLLTFTSSGKVFWLPVHQLPEAGS 82 (370)
T ss_dssp CCCCCEEEEEESSCEEEEEEHHHHHHTCCCCCCSEEEECSC-CCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCT
T ss_pred ccCCCEEEEEeCCCEEEEeeHHHhhhhccCCCCceecccCC-CCEEEEEEEecCCCEEEEEeCCCeEEEEEHHHCcCCCc
Confidence 467788999999999997665431 1112222322 34455555555556666667778776655433110000
Q ss_pred ecccccccccCCCCCCCceeccCCCCcCcceeeeccCCCCceEEE-EC--CCCCEEEEEeCCCcEEEeCCCC-------e
Q psy710 130 IINWNKAIDVCMKTHPGPIIHLSDNPLDPSKTFRHGFPYQPTAIA-FD--PIQKLLAIGTKTGSLRLLGRPG-------V 199 (591)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~--~~~~~l~~~~~dg~i~i~d~~~-------~ 199 (591)
...+.... ..+.......|.++. +. .++.+++.++..|.++...+.. +
T Consensus 83 ------------~a~G~~i~----------~ll~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~~~~~~~G 140 (370)
T 3l6v_A 83 ------------NARGRPII----------NWIPLESGERVQAVLPVREYADNRYVFMATRNGTVKKTPLSEFAFRLARG 140 (370)
T ss_dssp ------------TSCCEEGG----------GSCCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCSCCTTC
T ss_pred ------------ccCCcCHh----------hccCCCCCCEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHhhcccCCc
Confidence 00000000 000011123344433 32 2456899999999998865321 1
Q ss_pred EEEEeccCCCcEEEEEEEcCCceEEEEeCCCcEEEEEccCCC-----cceEEeeee-ccccEEEEEecC-----------
Q psy710 200 DAHVRHETDAAVIQMQFLTNEGALITATADDSLHLWNFRQKR-----PEIVHSLKF-QRERITYIHLPL----------- 262 (591)
Q Consensus 200 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~-----~~~~~~~~~-~~~~v~~~~~sp----------- 262 (591)
...........+..+........++..+.+|.+..++...-. ..-++-+.. ....|.++...+
T Consensus 141 ~~ai~L~~~d~lv~v~~~~~~~~i~l~T~~G~~irf~~~~v~~~gR~a~GV~~i~L~~~d~Vv~~~~~~~~~~~~~~~~~ 220 (370)
T 3l6v_A 141 KIAINLDEGDALVGVALTDGDRDVLLFASNGKTVRFGESTVRSMGRTATGVRGIRLAKGEEVVSLIVSERAGGVEDEVED 220 (370)
T ss_dssp EESSCCCTTCCEEEEEEECSCCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEEEECCC---------
T ss_pred eEEEEeCCCCEEEEEEEeCCCceEEEEeCCCeEEEEEccccCccCCCCCCeeeEEeCCCCEEEEEEEecccccccccccc
Confidence 111112224455566665556678888888888888764210 011111111 123444443333
Q ss_pred ------------------------CCCEEEEEeCCccEEEEEccCccc
Q psy710 263 ------------------------QSKWLYVGTEKGNIHVVNIESFTL 286 (591)
Q Consensus 263 ------------------------~~~~l~~~~~dg~i~i~d~~~~~~ 286 (591)
++..+++.+..|..+...+.....
T Consensus 221 ~~~~~~~~t~~g~~~~~~~~~~~~~~~~il~vTe~G~gKrt~~~e~~~ 268 (370)
T 3l6v_A 221 ESAEEVVETTDGAEPAVIDVADNGDVAYILTATENGYGKRTPLAEYPR 268 (370)
T ss_dssp --------------------------CEEEEEETTSEEEEEEGGGSCC
T ss_pred ccccccccccccccccccccccccCCceEEEeeCCCCEEEEEHHHhcc
Confidence 446788889999988888765443
No 381
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=42.77 E-value=2.1e+02 Score=26.61 Aligned_cols=240 Identities=12% Similarity=0.131 Sum_probs=124.0
Q ss_pred eCCCCcEEEEEeCCCcEEEEcCC----------CceeEeeccCCcceEEEEEeecCCEEEEecCCCeEEEEe---eccc-
Q psy710 15 FDPIQKLLAIGTKTGSLRLLGRP----------GVDAHVRHETDAAVIQMQFLTNEGALITATADDSLHLWN---FRQK- 80 (591)
Q Consensus 15 ~spdg~~la~g~~dg~i~lw~~~----------~~~~~~~~~h~~~v~~l~~sp~~~~l~s~~~d~~i~vw~---~~~~- 80 (591)
+-|+..++++.+.+|.|+--.+. +.....++. .+.+..+........|+..+..|.+.-+. +...
T Consensus 3 lI~~e~~~v~lT~~GyIKr~~l~~y~~~~r~g~g~~~~~lke-~D~l~~~~~~~t~d~ll~fT~~G~~~~~~~~eip~~~ 81 (370)
T 3l6v_A 3 LIAPEDVVVTLSHAGYAKRQPVSAYRAQRRGGRGRSAASTKE-EDFIDQLWLVNTHDTLLTFTSSGKVFWLPVHQLPEAG 81 (370)
T ss_dssp CCCCCCEEEEEESSCEEEEEEHHHHHHTCCCCCCSEEEECSC-CCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCC
T ss_pred cccCCCEEEEEeCCCEEEEeeHHHhhhhccCCCCceecccCC-CCEEEEEEEecCCCEEEEEeCCCeEEEEEHHHCcCCC
Confidence 44778899999999999875432 112223333 45565555555556666666677665444 3222
Q ss_pred ---Cceeee---EEEeeccceEEEEee---CCceEEEEEeCCCcEEEEEeeeeeeeceecccccccccCCCCCCCceecc
Q psy710 81 ---RPEIVH---SLKFQRERITYIHLP---LQSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHL 151 (591)
Q Consensus 81 ---~~~~~~---~~~~~~~~v~~~~~~---~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (591)
++..+. .+. ....|.++..- .++.+|+.++..|.++...+........ . +.....+
T Consensus 82 r~a~G~~i~~ll~L~-~~e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~~~~~~-~-------------G~~ai~L 146 (370)
T 3l6v_A 82 SNARGRPIINWIPLE-SGERVQAVLPVREYADNRYVFMATRNGTVKKTPLSEFAFRLA-R-------------GKIAINL 146 (370)
T ss_dssp TTSCCEEGGGSCCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCSCCT-T-------------CEESSCC
T ss_pred cccCCcCHhhccCCC-CCCEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHhhcccC-C-------------ceEEEEe
Confidence 111111 122 23445554432 2456888999999999888766432110 0 0000000
Q ss_pred CCCCcCcceeeeccCCCCceEEEECCCCCEEEEEeCCCcEEEeCCCCeE---------EEEeccCCCcEEEEEEEc----
Q psy710 152 SDNPLDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRPGVD---------AHVRHETDAAVIQMQFLT---- 218 (591)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~---------~~~~~~~~~~v~~~~~~~---- 218 (591)
.....+..+........++..+.+|.+..++..... ..........|.++...+
T Consensus 147 -------------~~~d~lv~v~~~~~~~~i~l~T~~G~~irf~~~~v~~~gR~a~GV~~i~L~~~d~Vv~~~~~~~~~~ 213 (370)
T 3l6v_A 147 -------------DEGDALVGVALTDGDRDVLLFASNGKTVRFGESTVRSMGRTATGVRGIRLAKGEEVVSLIVSERAGG 213 (370)
T ss_dssp -------------CTTCCEEEEEEECSCCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEEEECCC--
T ss_pred -------------CCCCEEEEEEEeCCCceEEEEeCCCeEEEEEccccCccCCCCCCeeeEEeCCCCEEEEEEEeccccc
Confidence 012233344444445567778888887776432211 111112234555555444
Q ss_pred -------------------------------CCceEEEEeCCCcEEEEEccCCC-----cceEEeee--eccccEEEEEe
Q psy710 219 -------------------------------NEGALITATADDSLHLWNFRQKR-----PEIVHSLK--FQRERITYIHL 260 (591)
Q Consensus 219 -------------------------------~~~~l~~~~~d~~i~~wd~~~~~-----~~~~~~~~--~~~~~v~~~~~ 260 (591)
++..+++.+..|..+...+..-. .+-+..++ ...+.+..+.+
T Consensus 214 ~~~~~~~~~~~~~~~t~~g~~~~~~~~~~~~~~~~il~vTe~G~gKrt~~~e~~~~~Rg~kGv~~~k~~~~~g~lv~~~~ 293 (370)
T 3l6v_A 214 VEDEVEDESAEEVVETTDGAEPAVIDVADNGDVAYILTATENGYGKRTPLAEYPRKGRGTQGVIGIQTTERNGKLVRAVL 293 (370)
T ss_dssp ---------------------------------CEEEEEETTSEEEEEEGGGSCCBCTTSCCEESSCCCTTTCSEEEEEE
T ss_pred cccccccccccccccccccccccccccccccCCceEEEeeCCCCEEEEEHHHhcccccCCcceEEEEecCCCCcEEEEEE
Confidence 34578888999998888775321 11122222 22234444433
Q ss_pred cCCCCEEEEEeCCccEEEEEccC
Q psy710 261 PLQSKWLYVGTEKGNIHVVNIES 283 (591)
Q Consensus 261 sp~~~~l~~~~~dg~i~i~d~~~ 283 (591)
..+...++..+..|.+.-..+..
T Consensus 294 v~~~d~i~liT~~G~~iR~~v~~ 316 (370)
T 3l6v_A 294 LGSTDEVMLISDGGTLVRTRGSE 316 (370)
T ss_dssp ECTTCEEEEEETTCCEEEEEGGG
T ss_pred eCCCceEEEEcCCCeEEEeeHhh
Confidence 33444555567777776666654
No 382
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=40.43 E-value=2e+02 Score=29.66 Aligned_cols=35 Identities=14% Similarity=0.070 Sum_probs=28.9
Q ss_pred eEEEecCCCCCCeEEEEEcCCEEEEEecccceEEEEec
Q psy710 308 IIHLSDNPLDPSKLLLAYETGLVVHWDLKLKRAEFRWQ 345 (591)
Q Consensus 308 v~~~~~sp~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 345 (591)
|.++.+ +..++++-+.|.++|+|++.+++++....
T Consensus 224 Is~~~~---~~~fLftL~~Dh~LRiWsL~t~~lv~t~D 258 (729)
T 3f7f_A 224 ISCKLF---HERYLIVLTQNCHLKIWDLTSFTLIQDYD 258 (729)
T ss_dssp EEEEEE---TTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred EEEecc---CCcEEEEEEcCCeEEEEEcCCCceEEeec
Confidence 454444 45899999999999999999999887765
No 383
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=39.33 E-value=2.2e+02 Score=25.88 Aligned_cols=237 Identities=13% Similarity=0.136 Sum_probs=125.2
Q ss_pred CcEEEEEeCCCcEEEEcCC----------CceeEeeccCCcceEEEEEeecCCEEEEecCCCeEEE---Eeeccc----C
Q psy710 19 QKLLAIGTKTGSLRLLGRP----------GVDAHVRHETDAAVIQMQFLTNEGALITATADDSLHL---WNFRQK----R 81 (591)
Q Consensus 19 g~~la~g~~dg~i~lw~~~----------~~~~~~~~~h~~~v~~l~~sp~~~~l~s~~~d~~i~v---w~~~~~----~ 81 (591)
...+++-+.+|.|+--.+. +..-..++ ..+.+..+.-......|+.-+..|.+.- |++... +
T Consensus 3 E~v~v~ls~~GyiKr~~~~~y~~~~rgg~g~~~~~~k-e~D~~~~~~~~~t~d~ll~fT~~Gr~y~~~~~~lp~~~r~~~ 81 (327)
T 3uc1_A 3 EDVVVTITETGYAKRTKTDLYRSQKRGGKGVQGAGLK-QDDIVAHFFVCSTHDLILFFTTQGRVYRAKAYDLPEASRTAR 81 (327)
T ss_dssp CEEEEEEETTSEEEEEEHHHHHHHC--------CCCC-GGGCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCSSSC
T ss_pred ccEEEEEeCCCEEEEeeHHHhhhcccCCCCccccccC-CCCEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCcCCCccCC
Confidence 3567778888888865422 01111122 2344555554455555655556666543 444332 1
Q ss_pred ceeee---EEEeeccceEEEEeeC---CceEEEEEeCCCcEEEEEeeeeeeeceecccccccccCCCCCCCceeccCCCC
Q psy710 82 PEIVH---SLKFQRERITYIHLPL---QSKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVCMKTHPGPIIHLSDNP 155 (591)
Q Consensus 82 ~~~~~---~~~~~~~~v~~~~~~~---~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (591)
+..+. .+. ....|.++..-+ +...++..+.+|.++-..+........ .+
T Consensus 82 G~~i~~~l~l~-~~e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r-~G----------------------- 136 (327)
T 3uc1_A 82 GQHVANLLAFQ-PEERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRS-GG----------------------- 136 (327)
T ss_dssp CEEHHHHTTCC-TTCCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCS-SC-----------------------
T ss_pred CEEHHHccCCC-CCCEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhcccc-Cc-----------------------
Confidence 12211 122 234455543333 577899999999999888766432110 00
Q ss_pred cCcceeeeccCCCCceEEEECCCCCEEEEEeCCCcEEEeCCC--CeEEE---------EeccCCCcEEEEEEEcCCceEE
Q psy710 156 LDPSKTFRHGFPYQPTAIAFDPIQKLLAIGTKTGSLRLLGRP--GVDAH---------VRHETDAAVIQMQFLTNEGALI 224 (591)
Q Consensus 156 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~--~~~~~---------~~~~~~~~v~~~~~~~~~~~l~ 224 (591)
...+.......+..+........++..+..|.+..+... ..... ........|.++...+++..++
T Consensus 137 ---~~~i~lke~D~lv~~~~~~~~d~ill~T~~G~~~rf~~~~~eip~~gr~a~Gv~~i~L~~~d~Vv~~~~~~~~~~ll 213 (327)
T 3uc1_A 137 ---IVAVNLRDNDELVGAVLCSAGDDLLLVSANGQSIRFSATDEALRPMGRATSGVQGMRFNIDDRLLSLNVVREGTYLL 213 (327)
T ss_dssp ---EESCBCCTTCCEEEEEEECTTCEEEEEETTSEEEEEECCTTTSCCCCTTSBCEESSCCCTTCCEEEEEECCTTCEEE
T ss_pred ---eEEEEECCCCEEEEEEEecCCCEEEEEECCCeEEEEECcccccCcCCcCCCCeeeecCCCCCEEEEEEEECCCCEEE
Confidence 000000112334444444445568888888888777554 22111 1122245677777666677899
Q ss_pred EEeCCCcEEEEEccCCC-----cceEEeeeec--cccEEEEEecCCCCEEEEEeCCccEEEEEccCc
Q psy710 225 TATADDSLHLWNFRQKR-----PEIVHSLKFQ--RERITYIHLPLQSKWLYVGTEKGNIHVVNIESF 284 (591)
Q Consensus 225 ~~~~d~~i~~wd~~~~~-----~~~~~~~~~~--~~~v~~~~~sp~~~~l~~~~~dg~i~i~d~~~~ 284 (591)
..+..|.++.-.+..-. ..-+..+... .+.+..+....+...++..+.+|.+..++...-
T Consensus 214 ~~T~~G~~Krt~l~e~~~~~R~~~G~~~~~l~~~~d~lv~~~~~~~~~~i~l~T~~G~~ir~~~~~i 280 (327)
T 3uc1_A 214 VATSGGYAKRTAIEEYPVQGRGGKGVLTVMYDRRRGRLVGALIVDDDSELYAVTSGGGVIRTAARQV 280 (327)
T ss_dssp EEETTSEEEEEEGGGSCBCCTTSCCEESSCCCTTTCSEEEEEEECTTCEEEEEEGGGCEEEEEGGGS
T ss_pred EEeCCCcEEEEEHHHccccCcCCCcEEEEEecCCCCeEEEEEEeCCCccEEEEcCCCeEEEEehhhc
Confidence 99999999888764321 0122223221 234444444344556777788888888877653
No 384
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=38.82 E-value=3.7e+02 Score=28.20 Aligned_cols=156 Identities=11% Similarity=0.011 Sum_probs=79.6
Q ss_pred CCCceEEEECCC-CCEEEEEeCCCcEEEeCCCCeEEEEeccC-------CCcEEEEEEEcCC-ceEEEEeCCCc----EE
Q psy710 167 PYQPTAIAFDPI-QKLLAIGTKTGSLRLLGRPGVDAHVRHET-------DAAVIQMQFLTNE-GALITATADDS----LH 233 (591)
Q Consensus 167 ~~~v~~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-------~~~v~~~~~~~~~-~~l~~~~~d~~----i~ 233 (591)
...|.+++++|. ...+.+++..+.|...+-........... ...+.++++.|.. +.++++..+.. -.
T Consensus 14 ~g~i~~i~~~p~~~~~~~a~~~~ggv~rS~DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~~~~~ 93 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDLLYARTDIGGAYRWDAGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDEWAA 93 (789)
T ss_dssp CSCEEEEEECSSSTTCEEEEESSSCEEEEETTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTSSCCE
T ss_pred CCcEEEEEECCCCCCEEEEEecCCCEEEecCCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCCcccE
Confidence 457899999995 45677777777777665444444433221 2369999999843 44555433211 33
Q ss_pred EEEccCCCcceEEeeeec-------c--ccEEEEEecCC-CCEEEEEeCCccEEEEEccCccccceeeehhhhcccc-cc
Q psy710 234 LWNFRQKRPEIVHSLKFQ-------R--ERITYIHLPLQ-SKWLYVGTEKGNIHVVNIESFTLSGYIINWNKAIDVC-MK 302 (591)
Q Consensus 234 ~wd~~~~~~~~~~~~~~~-------~--~~v~~~~~sp~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~-~~ 302 (591)
||.-..+- +....+... . ..+..++++|. .+.++.+...+.| |....+-. .|....... ..
T Consensus 94 v~~S~DgG-~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~gl--~~S~DgG~-----TW~~~~~~~~~~ 165 (789)
T 1sqj_A 94 FYVSEDRG-QSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEGI--WKSSDRAK-----TWTNVTSIPDAF 165 (789)
T ss_dssp EEEESSTT-SEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSSCE--EEESSTTS-----SCEEETTSCCCC
T ss_pred EEEECCCC-CcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccCCE--EEECCCCc-----ccCCCccCcccc
Confidence 44333221 222222210 0 12456777774 4566666644443 33322211 011100000 00
Q ss_pred CCCCCeEEEecCCCCCCeEEEEEcC-CEE
Q psy710 303 THPGPIIHLSDNPLDPSKLLLAYET-GLV 330 (591)
Q Consensus 303 ~~~~~v~~~~~sp~~~~~l~~~~~d-g~i 330 (591)
.....+..+.++|.+++.++.+..+ +.|
T Consensus 166 ~~~~~~~~i~~~p~~~~~~~~~~~~~~~v 194 (789)
T 1sqj_A 166 TNGIGYTSVIFDPERNGTIYASATAPQGM 194 (789)
T ss_dssp STTTCEEEEEECTTSTTCEEEEESSTTCE
T ss_pred CCCCCeEEEEECCCCCCEEEEEEcCCCeE
Confidence 1124578899998556677777655 444
No 385
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=38.62 E-value=1.1e+02 Score=30.85 Aligned_cols=58 Identities=12% Similarity=0.198 Sum_probs=39.0
Q ss_pred CceEEEECCCCCEEEEEeCC------------CcEEEeCCCCeEEEEec--cCCCcEEEEEEEcCCceEEEE
Q psy710 169 QPTAIAFDPIQKLLAIGTKT------------GSLRLLGRPGVDAHVRH--ETDAAVIQMQFLTNEGALITA 226 (591)
Q Consensus 169 ~v~~~~~~~~~~~l~~~~~d------------g~i~i~d~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~ 226 (591)
.+--|+|+|.|++++.-..+ ..+.+.+..+++..... .....++.++|+||++.|++.
T Consensus 477 ~PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CCcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 45789999999865543322 23555666655554332 336789999999999887765
No 386
>3mwp_A Nucleoprotein; structural genomics, scottish structural PROT facility, SSPF, nuclear protein; 1.79A {Lassa virus josiah} PDB: 3mwt_A 3mx2_A* 3mx5_A* 3r3l_A 3t5q_A 3t5n_A
Probab=35.35 E-value=8.9 Score=35.59 Aligned_cols=18 Identities=33% Similarity=0.722 Sum_probs=12.6
Q ss_pred EEecCCcEEEEeCCCCce
Q psy710 564 TGHADGSVKFWDASAGNL 581 (591)
Q Consensus 564 t~~~Dg~vr~Wd~~~~~l 581 (591)
.+..||.||+||+...++
T Consensus 162 ~~~~~GVVrvWDVkd~sl 179 (577)
T 3mwp_A 162 RAGRDGVVRVWDVKNAEL 179 (577)
T ss_dssp ----CCEECSEECSCGGG
T ss_pred CCCCCCeEEEEecCCHHH
Confidence 678999999999998765
Done!