Query psy7100
Match_columns 76
No_of_seqs 36 out of 38
Neff 3.9
Searched_HMMs 13730
Date Fri Aug 16 18:12:01 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7100.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/7100hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1pn3a_ c.87.1.5 (A:) TDP-epi- 31.1 21 0.0015 22.2 3.2 36 10-45 347-389 (391)
2 d1of9a_ a.64.1.4 (A:) Ameobapo 29.8 37 0.0027 17.9 3.8 27 14-44 6-32 (77)
3 d1qdma1 a.64.1.2 (A:1S-104S) ( 27.4 24 0.0017 19.6 2.7 22 14-35 70-91 (104)
4 d2nn6b2 d.101.1.1 (B:151-240) 23.4 34 0.0025 18.4 2.8 26 3-28 57-82 (90)
5 d1dpua_ a.4.5.16 (A:) C-termin 21.8 48 0.0035 18.1 3.3 24 20-43 26-49 (69)
6 d2je6b2 d.101.1.1 (B:156-241) 21.4 60 0.0044 17.3 3.8 27 3-29 57-83 (86)
7 d2gtga1 a.64.1.1 (A:2-79) Sapo 20.4 46 0.0033 17.1 2.9 21 15-35 6-26 (78)
8 d2o8ia1 a.288.1.1 (A:1-165) Hy 19.6 68 0.005 19.6 4.1 28 18-45 126-153 (165)
9 d1nkla_ a.64.1.1 (A:) NK-lysin 19.3 45 0.0033 17.3 2.7 21 14-34 5-25 (78)
10 d2nn6f2 d.101.1.1 (F:176-270) 18.4 34 0.0025 18.8 2.1 31 3-33 60-90 (95)
No 1
>d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]}
Probab=31.06 E-value=21 Score=22.20 Aligned_cols=36 Identities=11% Similarity=0.197 Sum_probs=20.6
Q ss_pred HHHHHHHHHH-------HHHHHHHhhcCcHHHHHHHHHHHhhh
Q psy7100 10 QFCDHVSRLM-------VTKVCQRASNQSTEIASCAIAKFLEI 45 (76)
Q Consensus 10 ~fa~~vs~~l-------v~EIr~ras~k~tE~A~~ai~~fL~~ 45 (76)
.+++.+-++| ++++++++..-+++.|...|.++|+.
T Consensus 347 ~l~~~i~~~l~~~~r~~a~~~a~~~~~~g~~~aa~~i~~~l~~ 389 (391)
T d1pn3a_ 347 SLSAALDTALAPEIRARATTVADTIRADGTTVAAQLLFDAVSL 389 (391)
T ss_dssp HHHHHHHHHTSTTHHHHHHHHGGGSCSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 4555555544 33444444444667777777777764
No 2
>d1of9a_ a.64.1.4 (A:) Ameobapore A {Entamoeba histolytica [TaxId: 5759]}
Probab=29.84 E-value=37 Score=17.88 Aligned_cols=27 Identities=0% Similarity=0.133 Sum_probs=17.6
Q ss_pred HHHHHHHHHHHHHhhcCcHHHHHHHHHHHhh
Q psy7100 14 HVSRLMVTKVCQRASNQSTEIASCAIAKFLE 44 (76)
Q Consensus 14 ~vs~~lv~EIr~ras~k~tE~A~~ai~~fL~ 44 (76)
.+|..+|+++++.+.|+ |++ .|.++|.
T Consensus 6 ~~C~~~v~~~~~l~~~~-t~~---~I~~~l~ 32 (77)
T d1of9a_ 6 NLCTGLINTLENLLTTK-GAD---KVKDYIS 32 (77)
T ss_dssp HHHHHHHHHHHHHCSSS-CSH---HHHHHHH
T ss_pred HHHHHHHHHHHHHHcCC-cHH---HHHHHHH
Confidence 36778889998877665 443 2555554
No 3
>d1qdma1 a.64.1.2 (A:1S-104S) (Pro)phytepsin {Barley (Hordeum vulgare) [TaxId: 4513]}
Probab=27.36 E-value=24 Score=19.57 Aligned_cols=22 Identities=9% Similarity=0.069 Sum_probs=17.5
Q ss_pred HHHHHHHHHHHHHhhcCcHHHH
Q psy7100 14 HVSRLMVTKVCQRASNQSTEIA 35 (76)
Q Consensus 14 ~vs~~lv~EIr~ras~k~tE~A 35 (76)
.+|..+|++|+..+.+..||+.
T Consensus 70 ~~C~~~v~~v~~~l~~n~Te~e 91 (104)
T d1qdma1 70 SACEMAVVWMQNQLAQNKTQDL 91 (104)
T ss_dssp HHHHHHHHHHHHHHHTTCCHHH
T ss_pred hhHHHHHHHHHHHHHccccHHH
Confidence 4677788999999988888653
No 4
>d2nn6b2 d.101.1.1 (B:151-240) Exosome complex exonuclease RRP41 {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.45 E-value=34 Score=18.42 Aligned_cols=26 Identities=15% Similarity=0.125 Sum_probs=21.1
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHhh
Q psy7100 3 DKFRDVHQFCDHVSRLMVTKVCQRAS 28 (76)
Q Consensus 3 ~~F~~i~~fa~~vs~~lv~EIr~ras 28 (76)
+.|.+...+|..-|+.+...+|+.+.
T Consensus 57 ~~~~~~l~~a~~~~~~i~~~~~~~l~ 82 (90)
T d2nn6b2 57 DHLERVLEAAAQAARDVHTLLDRVVR 82 (90)
T ss_dssp TSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56888999999999999777666663
No 5
>d1dpua_ a.4.5.16 (A:) C-terminal domain of RPA32 {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.80 E-value=48 Score=18.13 Aligned_cols=24 Identities=8% Similarity=0.005 Sum_probs=18.0
Q ss_pred HHHHHHHhhcCcHHHHHHHHHHHh
Q psy7100 20 VTKVCQRASNQSTEIASCAIAKFL 43 (76)
Q Consensus 20 v~EIr~ras~k~tE~A~~ai~~fL 43 (76)
++||.+++.+-|..+-+.|+-.+.
T Consensus 26 ~~el~~~l~~~~~~~i~~aid~L~ 49 (69)
T d1dpua_ 26 FQDLKNQLKHMSVSSIKQAVDFLS 49 (69)
T ss_dssp HHHHHHHSTTSCHHHHHHHHHHHH
T ss_pred HHHHHHHccCCCHHHHHHHHHHHH
Confidence 579999998888888776654443
No 6
>d2je6b2 d.101.1.1 (B:156-241) Exosome complex exonuclease 1, ECX1 {Sulfolobus solfataricus [TaxId: 2287]}
Probab=21.37 E-value=60 Score=17.30 Aligned_cols=27 Identities=11% Similarity=0.177 Sum_probs=21.5
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHhhc
Q psy7100 3 DKFRDVHQFCDHVSRLMVTKVCQRASN 29 (76)
Q Consensus 3 ~~F~~i~~fa~~vs~~lv~EIr~ras~ 29 (76)
+.|-+...+|..-|+.+...+|+.+.+
T Consensus 57 ~~~~~~l~~a~~~~~~I~~~~~e~l~~ 83 (86)
T d2je6b2 57 DEFRQAFDLAVKGINIIYNLEREALKS 83 (86)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 568889999999999988777766643
No 7
>d2gtga1 a.64.1.1 (A:2-79) Saposin C {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.37 E-value=46 Score=17.09 Aligned_cols=21 Identities=29% Similarity=0.381 Sum_probs=16.6
Q ss_pred HHHHHHHHHHHHhhcCcHHHH
Q psy7100 15 VSRLMVTKVCQRASNQSTEIA 35 (76)
Q Consensus 15 vs~~lv~EIr~ras~k~tE~A 35 (76)
+|+.+|+.++.-+.+..+++.
T Consensus 6 ~C~~~v~~~~~~l~~~~t~~~ 26 (78)
T d2gtga1 6 VCEFLVKEVTKLIDNNKTEKE 26 (78)
T ss_dssp HHHHHHHHHHHHHHTTCCHHH
T ss_pred HHHHHHHHHHHHHhCCchHHH
Confidence 678888899998888777543
No 8
>d2o8ia1 a.288.1.1 (A:1-165) Hypothetical protein Atu2327 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=19.63 E-value=68 Score=19.62 Aligned_cols=28 Identities=14% Similarity=0.151 Sum_probs=24.5
Q ss_pred HHHHHHHHHhhcCcHHHHHHHHHHHhhh
Q psy7100 18 LMVTKVCQRASNQSTEIASCAIAKFLEI 45 (76)
Q Consensus 18 ~lv~EIr~ras~k~tE~A~~ai~~fL~~ 45 (76)
.+-.++++|+.|-+.+|-..|+.+--+|
T Consensus 126 ~Il~~l~~Rl~n~~~~E~~~a~~ev~kI 153 (165)
T d2o8ia1 126 DILSAFDTRIDNNAAQEFATATGQVEKI 153 (165)
T ss_dssp HHHHHHHHHHTSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 4568899999999999999999987766
No 9
>d1nkla_ a.64.1.1 (A:) NK-lysin, NKL {Pig (Sus scrofa) [TaxId: 9823]}
Probab=19.34 E-value=45 Score=17.31 Aligned_cols=21 Identities=19% Similarity=0.191 Sum_probs=16.3
Q ss_pred HHHHHHHHHHHHHhhcCcHHH
Q psy7100 14 HVSRLMVTKVCQRASNQSTEI 34 (76)
Q Consensus 14 ~vs~~lv~EIr~ras~k~tE~ 34 (76)
.+|..+|+.+...+.+..+++
T Consensus 5 ~~C~~~v~~~~~~l~~~~t~~ 25 (78)
T d1nkla_ 5 ESCRKIIQKLEDMVGPQPNED 25 (78)
T ss_dssp HHHHHHHHHHHHHHCSSCCHH
T ss_pred HhhHHHHHHHHHHHcCCccHH
Confidence 357888899999998777754
No 10
>d2nn6f2 d.101.1.1 (F:176-270) Exosome complex exonuclease MTR3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=18.42 E-value=34 Score=18.82 Aligned_cols=31 Identities=3% Similarity=0.022 Sum_probs=23.4
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHhhcCcHH
Q psy7100 3 DKFRDVHQFCDHVSRLMVTKVCQRASNQSTE 33 (76)
Q Consensus 3 ~~F~~i~~fa~~vs~~lv~EIr~ras~k~tE 33 (76)
+.|.++..+|.+-|+.+..-+|+.+.+..-+
T Consensus 60 d~l~~~lela~~g~~~I~~i~~~aL~~~~~k 90 (95)
T d2nn6f2 60 ESWAEAVRLGLEGCQRLYPVLQQSLVRAARR 90 (95)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5688899999999999977777777544333
Done!