RPS-BLAST 2.2.26 [Sep-21-2011]

Database: pdb70 
           27,921 sequences; 6,701,793 total letters

Searching..................................................done

Query= psy7100
         (76 letters)



>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
            acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
            synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
          Length = 2006

 Score = 28.5 bits (63), Expect = 0.18
 Identities = 10/60 (16%), Positives = 20/60 (33%), Gaps = 26/60 (43%)

Query: 20   VTKVCQRASNQSTEIASCAIAKFLEIENSEESSSGWMLLSTLNL-----LAAGDVSLVEE 74
            +  V +R   ++           +EI N              N+     +AAGD+  ++ 
Sbjct: 1826 LQYVVERVGKRTGW--------LVEIVN-------------YNVENQQYVAAGDLRALDT 1864


  Database: pdb70
    Posted date:  Sep 4, 2012  3:40 AM
  Number of letters in database: 6,701,793
  Number of sequences in database:  27,921
  
Lambda     K      H
   0.317    0.126    0.357 

Gapped
Lambda     K      H
   0.267   0.0541    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 1,007,026
Number of extensions: 41692
Number of successful extensions: 56
Number of sequences better than 10.0: 1
Number of HSP's gapped: 56
Number of HSP's successfully gapped: 1
Length of query: 76
Length of database: 6,701,793
Length adjustment: 45
Effective length of query: 31
Effective length of database: 5,445,348
Effective search space: 168805788
Effective search space used: 168805788
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 51 (23.9 bits)