BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy7103
(467 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8IZQ1|WDFY3_HUMAN WD repeat and FYVE domain-containing protein 3 OS=Homo sapiens
GN=WDFY3 PE=1 SV=2
Length = 3526
Score = 407 bits (1046), Expect = e-112, Method: Compositional matrix adjust.
Identities = 199/386 (51%), Positives = 276/386 (71%), Gaps = 11/386 (2%)
Query: 1 MNIVRKLRSGSTGGVAPSSHEDSSQHSALGVMHLKKLFAEFSHSVNHLSEKEKDDKLYNM 60
MN+V+++ P E S Q +ALG+MHL++LF E H H+++KE+++KLY M
Sbjct: 1 MNMVKRIMG------RPRQEECSPQDNALGLMHLRRLFTELCHPPRHMTQKEQEEKLYMM 54
Query: 61 LPLFCKVFGNSNSADMTDKFRDVHQFCDHVSRLMVTKVCQRASNQSTEIASCAIAKFLEI 120
LP+F +VFGN+ MT+KF D+ QF VSRLMVT++ +RASN+STE AS AI +FLEI
Sbjct: 55 LPVFNRVFGNAPPNTMTEKFSDLLQFTTQVSRLMVTEIRRRASNKSTEAASRAIVQFLEI 114
Query: 121 ENSEESSSGWMLLSTLNLLAAGDVSLVEVMTKASLPSTLVKCLYLFFDLPQMNEEEANIT 180
SEE+S GWMLL+T+NLLA+ V+ MT S+PSTLVKCLYLFFDLP + E +
Sbjct: 115 NQSEEASRGWMLLTTINLLASSGQKTVDCMTTMSVPSTLVKCLYLFFDLPHVPEA---VG 171
Query: 181 DVNSDFTPRERRILLQKIFVQLLVRLCSHSAPAEELSNKDDLTLLFSAITSLCPPYNVIW 240
++ ERR LLQK+FVQ+LV+LCS +PAEEL+ KDDL LLFSAITS CPPYN+ W
Sbjct: 172 GAQNELPLAERRGLLQKVFVQILVKLCSFVSPAEELAQKDDLQLLFSAITSWCPPYNLPW 231
Query: 241 RKSAAEILMSLSSQALTPKVVQYVHDKGCIALCIENMTRRKGQDLTPLEIVEMFVSVFCF 300
RKSA E+LM++S L+ VV+Y+H+K C++ C++NM ++ DL+PLEIVEMF + CF
Sbjct: 232 RKSAGEVLMTISRHGLSVNVVKYIHEKECLSTCVQNM--QQSDDLSPLEIVEMFAGLSCF 289
Query: 301 LKDSSEVSQILLKDFKEAHGYTFLKNFLINLENDRSSEAQEAIRNLILMIATLSMCGYVE 360
LKDSS+VSQ LL DF+ GY FL + L+ LE + +E+++A+++L+ +I +L+ G E
Sbjct: 290 LKDSSDVSQTLLDDFRIWQGYNFLCDLLLRLEQAKEAESKDALKDLVNLITSLTTYGVSE 349
Query: 361 LRPNAASMGCIFQILGFCMPQPSGRG 386
L+P + G F + GF +PQP+G+G
Sbjct: 350 LKPAGITTGAPFLLPGFAVPQPAGKG 375
>sp|Q6VNB8|WDFY3_MOUSE WD repeat and FYVE domain-containing protein 3 OS=Mus musculus
GN=Wdfy3 PE=1 SV=1
Length = 3508
Score = 404 bits (1039), Expect = e-112, Method: Compositional matrix adjust.
Identities = 198/386 (51%), Positives = 273/386 (70%), Gaps = 11/386 (2%)
Query: 1 MNIVRKLRSGSTGGVAPSSHEDSSQHSALGVMHLKKLFAEFSHSVNHLSEKEKDDKLYNM 60
MN+V+++ P E S Q +ALG+MHL++LF E H H+++KE+++KLY M
Sbjct: 1 MNMVKRIMG------RPRQEECSPQDNALGLMHLRRLFTELCHPPRHMTQKEQEEKLYMM 54
Query: 61 LPLFCKVFGNSNSADMTDKFRDVHQFCDHVSRLMVTKVCQRASNQSTEIASCAIAKFLEI 120
LP+F +VFGN+ MT+KF D+ QF VSRLMVT++ +RASN+STE AS AI +FLEI
Sbjct: 55 LPVFNRVFGNAPPNTMTEKFSDLLQFTTQVSRLMVTEIRRRASNKSTEAASRAIVQFLEI 114
Query: 121 ENSEESSSGWMLLSTLNLLAAGDVSLVEVMTKASLPSTLVKCLYLFFDLPQMNEEEANIT 180
SEE+S GWMLL+T+NLLA+ V+ MT S+PSTLVKCLYLFFDLP + E
Sbjct: 115 NQSEEASRGWMLLTTINLLASSGQKTVDCMTTMSVPSTLVKCLYLFFDLPHVPEAGGG-- 172
Query: 181 DVNSDFTPRERRILLQKIFVQLLVRLCSHSAPAEELSNKDDLTLLFSAITSLCPPYNVIW 240
++ ERR LLQK FVQ+LV+LCS +PAEEL+ KDDL LLFSAITS CPPYN+ W
Sbjct: 173 -AQNELPLAERRGLLQKAFVQILVKLCSFVSPAEELAQKDDLQLLFSAITSWCPPYNLPW 231
Query: 241 RKSAAEILMSLSSQALTPKVVQYVHDKGCIALCIENMTRRKGQDLTPLEIVEMFVSVFCF 300
RKSA E+LM++S L+ VV+Y+H+K C++ C++NM ++ DL+PLEIVEMF + CF
Sbjct: 232 RKSAGEVLMTISRHGLSVNVVKYIHEKECLSTCVQNM--QQSDDLSPLEIVEMFAGLSCF 289
Query: 301 LKDSSEVSQILLKDFKEAHGYTFLKNFLINLENDRSSEAQEAIRNLILMIATLSMCGYVE 360
LKDSS+VSQ LL DF+ GY FL + L+ LE + +E ++A+++L+ ++ +L+ G E
Sbjct: 290 LKDSSDVSQTLLDDFRIWQGYNFLCDLLLRLEQGKEAECRDALKDLVSLVTSLTTYGVSE 349
Query: 361 LRPNAASMGCIFQILGFCMPQPSGRG 386
L+P + G F + GF +PQP+G+G
Sbjct: 350 LKPAGVTTGAPFLLPGFAVPQPAGKG 375
>sp|Q7TMB8|CYFP1_MOUSE Cytoplasmic FMR1-interacting protein 1 OS=Mus musculus GN=Cyfip1
PE=1 SV=1
Length = 1253
Score = 121 bits (304), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 51/66 (77%), Positives = 58/66 (87%)
Query: 402 ELEGLLAVNRLCHKLLSKLLGLDDYDAMLHEANHNVLAPYGRITLHIFWELNYDFLPNYC 461
EL+GLL +NR+ HKLLS+ L LD +DAM EANHNV APYGRITLH+FWELNYDFLPNYC
Sbjct: 797 ELDGLLEINRMTHKLLSRYLTLDSFDAMFREANHNVSAPYGRITLHVFWELNYDFLPNYC 856
Query: 462 YNGATN 467
YNG+TN
Sbjct: 857 YNGSTN 862
>sp|Q90YM8|CYFP1_DANRE Cytoplasmic FMR1-interacting protein 1 homolog OS=Danio rerio
GN=cyfip1 PE=2 SV=1
Length = 1253
Score = 121 bits (304), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 53/66 (80%), Positives = 57/66 (86%)
Query: 402 ELEGLLAVNRLCHKLLSKLLGLDDYDAMLHEANHNVLAPYGRITLHIFWELNYDFLPNYC 461
ELEGLL +NR+ HKLLSK L LD DAM EANHNV APYGRITLH+FWELNYDFLPNYC
Sbjct: 797 ELEGLLDINRMTHKLLSKYLTLDSIDAMFREANHNVSAPYGRITLHVFWELNYDFLPNYC 856
Query: 462 YNGATN 467
YNG+TN
Sbjct: 857 YNGSTN 862
>sp|Q7L576|CYFP1_HUMAN Cytoplasmic FMR1-interacting protein 1 OS=Homo sapiens GN=CYFIP1
PE=1 SV=1
Length = 1253
Score = 121 bits (303), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 51/66 (77%), Positives = 58/66 (87%)
Query: 402 ELEGLLAVNRLCHKLLSKLLGLDDYDAMLHEANHNVLAPYGRITLHIFWELNYDFLPNYC 461
EL+GLL +NR+ HKLLS+ L LD +DAM EANHNV APYGRITLH+FWELNYDFLPNYC
Sbjct: 797 ELDGLLEINRMTHKLLSRYLTLDGFDAMFREANHNVSAPYGRITLHVFWELNYDFLPNYC 856
Query: 462 YNGATN 467
YNG+TN
Sbjct: 857 YNGSTN 862
>sp|Q299G2|CYFIP_DROPS Cytoplasmic FMR1-interacting protein OS=Drosophila pseudoobscura
pseudoobscura GN=Sra-1 PE=3 SV=1
Length = 1291
Score = 117 bits (294), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 52/66 (78%), Positives = 57/66 (86%)
Query: 402 ELEGLLAVNRLCHKLLSKLLGLDDYDAMLHEANHNVLAPYGRITLHIFWELNYDFLPNYC 461
ELEGLL NR+CHKLLSK L LD++D M+ EANHNVLAPYGRITLH+F ELNYDFL NYC
Sbjct: 816 ELEGLLEANRICHKLLSKYLALDNFDGMVKEANHNVLAPYGRITLHVFVELNYDFLVNYC 875
Query: 462 YNGATN 467
YN ATN
Sbjct: 876 YNAATN 881
>sp|Q9VF87|CYFIP_DROME Cytoplasmic FMR1-interacting protein OS=Drosophila melanogaster
GN=Sra-1 PE=1 SV=1
Length = 1291
Score = 117 bits (294), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 52/66 (78%), Positives = 57/66 (86%)
Query: 402 ELEGLLAVNRLCHKLLSKLLGLDDYDAMLHEANHNVLAPYGRITLHIFWELNYDFLPNYC 461
ELEGLL NR+CHKLLSK L LD++D M+ EANHNVLAPYGRITLH+F ELNYDFL NYC
Sbjct: 816 ELEGLLEANRICHKLLSKYLALDNFDGMVKEANHNVLAPYGRITLHVFVELNYDFLVNYC 875
Query: 462 YNGATN 467
YN ATN
Sbjct: 876 YNAATN 881
>sp|Q5R414|CYFP2_PONAB Cytoplasmic FMR1-interacting protein 2 OS=Pongo abelii GN=CYFIP2
PE=2 SV=1
Length = 1253
Score = 115 bits (287), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 49/66 (74%), Positives = 56/66 (84%)
Query: 402 ELEGLLAVNRLCHKLLSKLLGLDDYDAMLHEANHNVLAPYGRITLHIFWELNYDFLPNYC 461
ELE LL +NRL H+LL K + LD +DAM EANHNV APYGRITLH+FWELN+DFLPNYC
Sbjct: 796 ELEWLLEINRLTHRLLCKHMTLDSFDAMFREANHNVSAPYGRITLHVFWELNFDFLPNYC 855
Query: 462 YNGATN 467
YNG+TN
Sbjct: 856 YNGSTN 861
>sp|Q96F07|CYFP2_HUMAN Cytoplasmic FMR1-interacting protein 2 OS=Homo sapiens GN=CYFIP2
PE=1 SV=2
Length = 1278
Score = 115 bits (287), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 49/66 (74%), Positives = 56/66 (84%)
Query: 402 ELEGLLAVNRLCHKLLSKLLGLDDYDAMLHEANHNVLAPYGRITLHIFWELNYDFLPNYC 461
ELE LL +NRL H+LL K + LD +DAM EANHNV APYGRITLH+FWELN+DFLPNYC
Sbjct: 821 ELEWLLEINRLTHRLLCKHMTLDSFDAMFREANHNVSAPYGRITLHVFWELNFDFLPNYC 880
Query: 462 YNGATN 467
YNG+TN
Sbjct: 881 YNGSTN 886
>sp|Q5SQX6|CYFP2_MOUSE Cytoplasmic FMR1-interacting protein 2 OS=Mus musculus GN=Cyfip2
PE=1 SV=2
Length = 1253
Score = 115 bits (287), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 49/66 (74%), Positives = 56/66 (84%)
Query: 402 ELEGLLAVNRLCHKLLSKLLGLDDYDAMLHEANHNVLAPYGRITLHIFWELNYDFLPNYC 461
ELE LL +NRL H+LL K + LD +DAM EANHNV APYGRITLH+FWELN+DFLPNYC
Sbjct: 796 ELEWLLEINRLTHRLLCKHMTLDSFDAMFREANHNVSAPYGRITLHVFWELNFDFLPNYC 855
Query: 462 YNGATN 467
YNG+TN
Sbjct: 856 YNGSTN 861
>sp|Q6GQD1|CYFP2_XENLA Cytoplasmic FMR1-interacting protein 2 OS=Xenopus laevis GN=cyfip2
PE=2 SV=1
Length = 1253
Score = 114 bits (285), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 50/66 (75%), Positives = 56/66 (84%)
Query: 402 ELEGLLAVNRLCHKLLSKLLGLDDYDAMLHEANHNVLAPYGRITLHIFWELNYDFLPNYC 461
ELE LL +NRL H+LLSK L LD +DAM EANHNV APYGR TLH+FWELN+DFLPNYC
Sbjct: 796 ELEWLLDINRLTHRLLSKHLTLDSFDAMFREANHNVSAPYGRNTLHVFWELNFDFLPNYC 855
Query: 462 YNGATN 467
YNG+TN
Sbjct: 856 YNGSTN 861
>sp|Q6ZS81|WDFY4_HUMAN WD repeat- and FYVE domain-containing protein 4 OS=Homo sapiens
GN=WDFY4 PE=1 SV=3
Length = 3184
Score = 100 bits (250), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 137/283 (48%), Gaps = 15/283 (5%)
Query: 80 FRDVHQFCDHVSRLMVTKVCQRASNQSTEIASCAIAKFLEIENSEESSSGWMLLSTLNLL 139
F + + + VS + ++ + + E A A + L + + G++LL ++ +L
Sbjct: 89 FPSLQRLAEDVSDQLAQQLQKALVGKPAEQARLAAGQLLWWKGDVDQD-GYLLLKSVYVL 147
Query: 140 AAGDVSLVEVMTKASLPSTLVKCLYLFFDLPQMNEEEANITDVNSDFTPRERRILLQKIF 199
D + + ++ LP+ L++CLYLFF P ++++E +D+ +QK+F
Sbjct: 148 TGTDSETLGRVAESGLPALLLQCLYLFFVFP-LDKDELLESDLQ-----------VQKMF 195
Query: 200 VQLLVRLCSHSAPAEELSNKDDLTLLFSAITSLCPPYNVIWRKSAAEILMSLSSQALTPK 259
VQ+L+ +CS S E L + +L L A T L W++ +L ++S +A
Sbjct: 196 VQMLLNICSDSQGLEGLLSGSELQSLLIATTCLREHSCCFWKEPTFCVLRAIS-KAQNLS 254
Query: 260 VVQYVHDKGCIALCIENMTRRKGQDLTPLEIVEMFVSVFCFLKDSSEVSQILLKDFKEAH 319
++QY+ C+ L ++N++R P E+ E + F+KDS VS L +F+ +
Sbjct: 255 IIQYLQATDCVRLSLQNLSRLTDTLPAP-EVSEAVSLILGFVKDSYPVSSALFLEFENSE 313
Query: 320 GYTFLKNFLINLENDRSSEAQEAIRNLILMIATLSMCGYVELR 362
GY L L+ + SE + L+ ++ L+ CG EL+
Sbjct: 314 GYPLLLKVLLRYDGLTQSEVDPHLEELLGLVVWLTTCGRSELK 356
>sp|Q55DM1|LVSA_DICDI BEACH domain-containing protein lvsA OS=Dictyostelium discoideum
GN=lvsA PE=4 SV=2
Length = 3619
Score = 97.8 bits (242), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 92/341 (26%), Positives = 154/341 (45%), Gaps = 40/341 (11%)
Query: 34 LKKLFAEFSHSVNHLSEKEKDDKLYNMLPLFCKVFGNS---NSADMTDKF-RDVHQFCDH 89
LK L+ EF S S+K+K +L +LP F ++ + + M D F + F
Sbjct: 150 LKLLWQEFLSSK---SDKDKVMRLNKLLPYFIGLYEDKKIDTKSPMVDIFGNNSKSFSFA 206
Query: 90 VSRLMVTKVCQ--RASNQST----------EIASCAIAKFLEIENSEESSSGWMLLSTLN 137
+SR +V + + + +N E + I KF + + SG+ LL ++
Sbjct: 207 ISRRLVKDINEIMKQANSPQQPPQPPQLIKETIAKEIYKFFSTTSGQ--VSGFELLYSIE 264
Query: 138 LLAAGDVSLVEVMTKASLPSTLVKCLYLFFDLPQMNEEEANITDVNSDFTPRERRILLQK 197
+L+ + S E M +AS+PS LV+CL FF +P E + ++++
Sbjct: 265 ILSESNTSCAEAMAEASIPSMLVRCLQYFFLVPYTTMMETT-------------KGIIEE 311
Query: 198 IFVQLLVRLCSHSAPAEELSNKDDLTLLFSAITSLCPPYNVIWRKSAAEILMSLSSQALT 257
++ L L + EEL D L+ LF+ +++ CPP + R + L+ L
Sbjct: 312 KLIRTLCFLSKQKSAIEELQKTDTLSTLFALMSNECPPSHRPLRAKIGSFGLELTD--LY 369
Query: 258 PKVVQYVHDKGCIALCIENMTRRKGQDLTPLEIVEMFVSVFCFLKDSSEVSQILLKDFKE 317
P + Y++ K IA I+++T TP V + + L +SS+ S ILL +F+
Sbjct: 370 PPTITYINSKRVIANIIKDLTNYYM--FTPESYVTLCRIIIKILSESSKKSTILLDEFQR 427
Query: 318 AHGYTFLKNFLINLENDRSSEAQEAIRNLILMIATLSMCGY 358
GYTFL + L LE+ + A L+ I +L GY
Sbjct: 428 NDGYTFLVDSLFRLESSKDKPA--LFEQLLDSICSLVYIGY 466
>sp|O44518|CYFIP_CAEEL Cytoplasmic FMR1-interacting protein homolog OS=Caenorhabditis
elegans GN=gex-2 PE=1 SV=4
Length = 1262
Score = 90.5 bits (223), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Query: 402 ELEGLLAVNRLCHKLLSKLL-GLDDYDAMLHEANHNVLAPYGRITLHIFWELNYDFLPNY 460
EL+ L+ NRLCH LLS +L + +D + EANH V +P+GRITLH+FWELNYDF+PN+
Sbjct: 799 ELDMLIDTNRLCHTLLSDVLHSIAPFDDLFQEANHAVNSPHGRITLHVFWELNYDFVPNF 858
Query: 461 CYNGATN 467
YNG+T+
Sbjct: 859 VYNGSTH 865
>sp|Q6UK63|PIRA_DICDI Protein pirA OS=Dictyostelium discoideum GN=pirA PE=1 SV=1
Length = 1336
Score = 57.4 bits (137), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 44/67 (65%), Gaps = 2/67 (2%)
Query: 402 ELEGLLAVNRLCHKLLSKLLGLDDYDAMLHEANHN--VLAPYGRITLHIFWELNYDFLPN 459
ELE +A +L HKLLS+ +D ++++ +E N + +++ +GRI LHI +EL DF PN
Sbjct: 789 ELETQIANIKLTHKLLSEYFDIDPFESIFNEINESTSLVSYHGRIVLHIIFELVADFAPN 848
Query: 460 YCYNGAT 466
Y +N T
Sbjct: 849 YTFNSIT 855
>sp|Q5S2C3|PIR_ARATH Protein PIR OS=Arabidopsis thaliana GN=PIR PE=1 SV=2
Length = 1282
Score = 41.6 bits (96), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 37/61 (60%), Gaps = 2/61 (3%)
Query: 402 ELEGLLAVNRLCHKLLSKLLGLDDYDAMLHEANHNV--LAPYGRITLHIFWELNYDFLPN 459
ELE L+ + + H+LLS+ L +D + ML+E N+ ++ R+ I+ E+ DFLPN
Sbjct: 806 ELEKLIDILKHSHELLSQDLSIDPFSLMLNEMQENISLVSFSSRLATQIWSEMQSDFLPN 865
Query: 460 Y 460
+
Sbjct: 866 F 866
>sp|Q86JF2|LVSB_DICDI BEACH domain-containing protein lvsB OS=Dictyostelium discoideum
GN=lvsB PE=4 SV=1
Length = 4118
Score = 36.6 bits (83), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 25/109 (22%), Positives = 55/109 (50%), Gaps = 4/109 (3%)
Query: 225 LFSAITSLCPP---YNVIWRKSAAEILMSLSSQALTPKVVQYVHDKGCIALCIENMTRRK 281
+ S S PP +++I+++ + +S L+ + +H+ I + M + K
Sbjct: 431 ILSTTASSLPPNSSFSIIYQQLSQIFAQIMSKSCLSSDTIVLIHNFKLIKNLLNIMDKLK 490
Query: 282 GQDLTPLE-IVEMFVSVFCFLKDSSEVSQILLKDFKEAHGYTFLKNFLI 329
+D + I+E+ + +K S+ ++++L DF +A+GY+ L N +I
Sbjct: 491 EKDEYNMNLIIELNKIILFSIKSSTSITKLLHDDFTKANGYSILLNSMI 539
>sp|O43101|CBF5_CANAL Centromere/microtubule-binding protein CBF5 OS=Candida albicans
(strain SC5314 / ATCC MYA-2876) GN=CBF5 PE=3 SV=1
Length = 479
Score = 33.9 bits (76), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 56/128 (43%), Gaps = 18/128 (14%)
Query: 194 LLQKIFVQLLVRLCSHSAPAEELS---NKDDLTLLFSAITSLCPPYN------VIWRKSA 244
LL K + +LLVR H P S N+D + + S + +L P N V W K
Sbjct: 25 LLLKNYDKLLVR-SGHYTPIPAGSAPLNRDIKSYVSSGVINLDKPSNPSSHEVVAWIKRI 83
Query: 245 AEILMSLSSQALTPKVVQYVHDKGCIALCIENMTR-RKGQDLTPLEIVEMFVSVFCFLKD 303
+ + S L PKV GC+ +CI+ TR K Q E V V + LKD
Sbjct: 84 LRVEKTGHSGTLDPKVT------GCLIVCIDRATRLVKSQQGAGKEYV-CIVRLHEQLKD 136
Query: 304 SSEVSQIL 311
E+++ L
Sbjct: 137 DKELNRAL 144
>sp|B0JNB0|ISPE_MICAN 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase OS=Microcystis
aeruginosa (strain NIES-843) GN=ispE PE=3 SV=1
Length = 313
Score = 33.5 bits (75), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 25/47 (53%)
Query: 319 HGYTFLKNFLINLENDRSSEAQEAIRNLILMIATLSMCGYVELRPNA 365
H YT L INL + + + L++++ T+++C + LRPN
Sbjct: 2 HSYTLLAPAKINLYLEIVGDRPDGFHELVMVMQTVALCDRITLRPNG 48
>sp|Q8HY03|CD209_HYLLA CD209 antigen OS=Hylobates lar GN=CD209 PE=3 SV=1
Length = 450
Score = 32.3 bits (72), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 42/107 (39%), Gaps = 22/107 (20%)
Query: 44 SVNHLSEKEKDDKLYNML-------PLFCK------VFGNSNSADMTDKFRDVHQFCDHV 90
+V L EK K ++Y L C+ F N M++ RD H D V
Sbjct: 271 AVGELPEKSKQQEIYQELTQLKAAVERLCRPCPWEWTFFQGNCYFMSNSQRDWH---DSV 327
Query: 91 SRLMVTKVCQRASNQSTEIASCAIAKFLEIENSEESSSGWMLLSTLN 137
+ CQ Q I S FL++++S + WM LS LN
Sbjct: 328 T------ACQEVGAQLVVIKSAEEQNFLQLQSSRSNRFAWMGLSDLN 368
>sp|Q8HY01|CD209_NOMCO CD209 antigen OS=Nomascus concolor GN=CD209 PE=3 SV=1
Length = 404
Score = 32.0 bits (71), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 42/107 (39%), Gaps = 22/107 (20%)
Query: 44 SVNHLSEKEKDDKLYNML-------PLFCK------VFGNSNSADMTDKFRDVHQFCDHV 90
+V L EK K ++Y L C+ F N M++ RD H D V
Sbjct: 225 AVGELPEKSKQQEIYQELTQLKAAVERLCRPCPWEWTFFQGNCYFMSNSQRDWH---DSV 281
Query: 91 SRLMVTKVCQRASNQSTEIASCAIAKFLEIENSEESSSGWMLLSTLN 137
+ CQ Q I S FL++++S + WM LS LN
Sbjct: 282 T------ACQEVGAQLVVIKSAEEQNFLQLQSSRSNRFAWMGLSDLN 322
>sp|Q5NHI8|SYR_FRATT Arginine--tRNA ligase OS=Francisella tularensis subsp. tularensis
(strain SCHU S4 / Schu 4) GN=argS PE=3 SV=1
Length = 581
Score = 32.0 bits (71), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 28/63 (44%)
Query: 30 GVMHLKKLFAEFSHSVNHLSEKEKDDKLYNMLPLFCKVFGNSNSADMTDKFRDVHQFCDH 89
GVMHL L ++ + E DD + N + + FG+ + D F D+ +F H
Sbjct: 392 GVMHLADLISQAKEYAKNRMPDENDDSIINQIAMATIKFGDLINNYANDYFFDLEKFAQH 451
Query: 90 VSR 92
+
Sbjct: 452 EGK 454
>sp|Q14IZ0|SYR_FRAT1 Arginine--tRNA ligase OS=Francisella tularensis subsp. tularensis
(strain FSC 198) GN=argS PE=3 SV=1
Length = 581
Score = 32.0 bits (71), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 28/63 (44%)
Query: 30 GVMHLKKLFAEFSHSVNHLSEKEKDDKLYNMLPLFCKVFGNSNSADMTDKFRDVHQFCDH 89
GVMHL L ++ + E DD + N + + FG+ + D F D+ +F H
Sbjct: 392 GVMHLADLISQAKEYAKNRMPDENDDSIINQIAMATIKFGDLINNYANDYFFDLEKFAQH 451
Query: 90 VSR 92
+
Sbjct: 452 EGK 454
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.134 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 162,291,538
Number of Sequences: 539616
Number of extensions: 6298454
Number of successful extensions: 14113
Number of sequences better than 100.0: 27
Number of HSP's better than 100.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 14077
Number of HSP's gapped (non-prelim): 32
length of query: 467
length of database: 191,569,459
effective HSP length: 121
effective length of query: 346
effective length of database: 126,275,923
effective search space: 43691469358
effective search space used: 43691469358
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)