Query psy7103
Match_columns 467
No_of_seqs 99 out of 112
Neff 4.7
Searched_HMMs 46136
Date Fri Aug 16 18:15:24 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7103.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/7103hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1788|consensus 100.0 5.5E-53 1.2E-57 458.4 15.8 374 32-437 70-515 (2799)
2 KOG3534|consensus 99.9 9.8E-27 2.1E-31 248.7 0.9 68 400-467 790-857 (1253)
3 PF05994 FragX_IP: Cytoplasmic 99.8 3.7E-21 8E-26 214.3 5.9 68 400-467 405-475 (820)
4 PLN03099 PIR Protein PIR; Prov 99.8 8.5E-21 1.8E-25 213.4 6.5 68 400-467 751-820 (1232)
5 KOG1788|consensus 97.4 0.00037 7.9E-09 80.0 7.3 241 25-306 16-330 (2799)
6 PF10508 Proteasom_PSMB: Prote 90.1 21 0.00045 39.1 18.1 133 131-296 96-228 (503)
7 PF05804 KAP: Kinesin-associat 84.6 67 0.0015 37.2 18.5 157 131-331 265-423 (708)
8 KOG2160|consensus 80.2 19 0.00041 38.1 11.2 115 233-362 133-247 (342)
9 cd00020 ARM Armadillo/beta-cat 77.6 23 0.00049 29.0 9.0 90 197-298 25-115 (120)
10 PF04826 Arm_2: Armadillo-like 66.9 1.5E+02 0.0032 29.9 13.6 151 144-323 56-225 (254)
11 PF05804 KAP: Kinesin-associat 65.5 2.7E+02 0.0058 32.4 17.4 118 195-330 347-464 (708)
12 KOG0166|consensus 65.2 47 0.001 37.0 10.2 136 131-277 256-416 (514)
13 PLN03200 cellulose synthase-in 61.6 2.3E+02 0.005 37.0 16.3 117 133-279 168-285 (2102)
14 PLN03200 cellulose synthase-in 58.0 3E+02 0.0064 36.0 16.3 99 194-296 709-808 (2102)
15 PF10508 Proteasom_PSMB: Prote 43.9 4.7E+02 0.01 28.7 21.7 150 199-364 180-356 (503)
16 cd00020 ARM Armadillo/beta-cat 43.8 1.7E+02 0.0038 23.6 10.7 81 237-328 20-100 (120)
17 PF04499 SAPS: SIT4 phosphatas 42.4 1.2E+02 0.0027 33.3 8.9 78 220-304 62-150 (475)
18 PF14664 RICTOR_N: Rapamycin-i 32.9 6.3E+02 0.014 26.9 13.5 83 195-280 163-252 (371)
19 KOG4199|consensus 30.4 1.4E+02 0.0031 32.2 6.7 121 201-331 264-384 (461)
20 PF07159 DUF1394: Protein of u 29.5 3.5E+02 0.0075 28.4 9.3 35 194-228 83-118 (303)
21 PF06371 Drf_GBD: Diaphanous G 29.1 1.6E+02 0.0034 26.9 6.2 103 131-252 83-186 (187)
22 KOG4822|consensus 27.9 1.2E+03 0.025 29.5 13.9 91 79-174 1037-1132(1906)
23 PF14726 RTTN_N: Rotatin, an a 26.5 1E+02 0.0022 27.0 4.1 71 155-250 27-97 (98)
24 PF08045 CDC14: Cell division 23.1 4.4E+02 0.0095 27.0 8.5 78 243-330 110-187 (257)
25 PF05536 Neurochondrin: Neuroc 23.0 3.2E+02 0.0069 30.6 8.2 102 194-304 114-215 (543)
26 KOG2005|consensus 22.3 1.3E+03 0.029 27.2 12.8 145 82-257 144-297 (878)
27 COG1563 Predicted subunit of t 21.8 1.1E+02 0.0025 26.5 3.4 42 131-174 19-60 (87)
28 PF10350 DUF2428: Putative dea 21.2 2.2E+02 0.0047 28.4 5.9 66 194-279 185-251 (255)
No 1
>KOG1788|consensus
Probab=100.00 E-value=5.5e-53 Score=458.37 Aligned_cols=374 Identities=21% Similarity=0.294 Sum_probs=316.4
Q ss_pred HHHHHHHHHhhccCCCCChHHHHHHHhhhhhHHHHHhcCC-CchhhHHhhhhhhhhHHHHHHHHHHHHHHHhccCChHHH
Q psy7103 32 MHLKKLFAEFSHSVNHLSEKEKDDKLYNMLPLFCKVFGNS-NSADMTDKFRDVHQFCDHVSRLMVTKVCQRASNQSTEIA 110 (467)
Q Consensus 32 ~~Lrr~f~Ef~~~~~~~s~kEke~~L~~~LPLFckv~~~~-~~~~~v~~F~~~~~Fa~~vsr~lV~eI~k~~~~q~~e~A 110 (467)
.++||.|+||++ ++++||||.+++..+.-||++.+.+ ++++++++.++-+.|.|+++|++|++++|+.++
T Consensus 70 ldfkrmweefrs---ssseeeKEaalnlTvlcfcrlvkvhanvdqlvTmlveqhIfsFvigrafvkdyekLkag------ 140 (2799)
T KOG1788|consen 70 LDFKRMWEEFRS---SSSEEEKEAALNLTVLCFCRLVKVHANVDQLVTMLVEQHIFSFVIGRAFVKDYEKLKAG------ 140 (2799)
T ss_pred ccHHHHHHhchh---hccHHHHHHHHhhhheeeeeeeHHhhhhhhhhhhhhHhhHHHHhcCccccccchhhhcc------
Confidence 359999999988 6899999999999999999999987 999999999999999999999999999998643
Q ss_pred HHHHHHHhhHhcCCCCchhhhHHHHHHHHhcCChhHHHHHHhcCChhHHHHHHHHhhcCCCCChhh----hhccCCCCCC
Q psy7103 111 SCAIAKFLEIENSEESSSGWMLLSTLNLLAAGDVSLVEVMTKASLPSTLVKCLYLFFDLPQMNEEE----ANITDVNSDF 186 (467)
Q Consensus 111 ~~aI~~fl~~~~~e~~s~G~~LL~sl~lLs~~~~~~v~~m~~agLPStLVkcLYLffdlP~~~~~~----~~~~~~~s~~ 186 (467)
.++|.+||+|.+.|.+++. ++.+||+++|||.|+|||+|...-.. -.+...+.+.
T Consensus 141 ---------------ss~ganLLtaeevlmsgpa------dKqSLldsgikcclihfdlaalAytvtstdltegatEved 199 (2799)
T KOG1788|consen 141 ---------------SSHGANLLTAEEVLMSGPA------DKQSLLDSGIKCCLIHFDLAALAYTVTSTDLTEGATEVED 199 (2799)
T ss_pred ---------------ccccchhhhhhHHHhhCch------hhhccccccceehhhhhccHhhhhhhhhcccccCcchhhH
Confidence 3789999999999988765 45789999999999999998644311 1112234455
Q ss_pred chhHHHHHHHHHHHHHHHHHhcCCcccccccccCchhHHHHHHhCC------------CCCCccchhHHHHHHH--HHHh
Q psy7103 187 TPRERRILLQKIFVQLLVRLCSHSAPAEELSNKDDLTLLFSAITSL------------CPPYNVIWRKSAAEIL--MSLS 252 (467)
Q Consensus 187 ~~~e~r~~~q~~~vqiL~~Lc~~~~~~EeL~~~DdLqlLF~~~ts~------------cp~~n~~WR~~a~~vL--~~iS 252 (467)
+...++..+++++||||++|||+|+++|+|+|+|+|-+||.|+++. +|.||++|||+|+|+| ..++
T Consensus 200 eekknnekvegsvvqIMkaLasfpsaaqsLiedDsLllLFvmvangs~~~fs~~k~glVaehNiqlhklamqiLglllvn 279 (2799)
T KOG1788|consen 200 EEKKNNEKVEGSVVQIMKALASFPSAAQSLIEDDSLLLLFVMVANGSLMAFSRFKVGLVAEHNIQLHKLAMQILGLLLVN 279 (2799)
T ss_pred HHhhhhhhhhhHHHHHHHHHhcCchHHHHhhccccHHHHHHHhccccchhhhhhccchhhhhHHHHHHHHHHHHhHHhhc
Confidence 5677999999999999999999999999999999999999999875 9999999999999999 5559
Q ss_pred hcCCChhhHHHHhhhcHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHhhhchhhhHHHHHHHHhccChHHHHHHHHhhc
Q psy7103 253 SQALTPKVVQYVHDKGCIALCIENMTRRKGQDLTPLEIVEMFVSVFCFLKDSSEVSQILLKDFKEAHGYTFLKNFLINLE 332 (467)
Q Consensus 253 ~~~lt~~vi~YI~~k~cI~~~l~nl~~~~~~~~s~~e~ve~~~~v~~fLkdS~~~S~~LlddF~~~~GY~fL~~flLr~e 332 (467)
|||.|..+|+|.|-++|+.+.++|+.-.+||.-...-+++.+.+..||++.+....-+|+|||+++|||.||+||+|+++
T Consensus 280 DngsTaayIrkhhliKvllmaVKnfdpacgdsaytqgivdlllecvelsyrpeyggvrLlddirnAhGYhflvqFaLkls 359 (2799)
T KOG1788|consen 280 DNGSTAAYIRKHHLIKVLLMAVKNFDPACGDSAYTQGIVDLLLECVELSYRPEYGGVRLLDDIRNAHGYHFLVQFALKLS 359 (2799)
T ss_pred CCccHHHHHHHHHHHHHHHHHHhhcCCCCCchHhHHHHHHHHHHHHHHhcCcccchhHHHHHHHhccCeeeHHHHHHHhc
Confidence 99988888888888999999999988888887444445555555555666666688899999999999999999999988
Q ss_pred cC-----------------------------------CChhHHHHHHHHHHHHHHhHhhcccccccCCCCCCCCcccCCC
Q psy7103 333 ND-----------------------------------RSSEAQEAIRNLILMIATLSMCGYVELRPNAASMGCIFQILGF 377 (467)
Q Consensus 333 ~~-----------------------------------~~~e~~~~l~~Ll~li~sLt~cG~~ELk~~~~~s~~~~Q~~gF 377 (467)
+. ......|++++||++..+|+..|+.|+.|.-.+-.+.-|+|||
T Consensus 360 s~pk~~~f~~~~~ds~~~~p~~~~d~et~ns~~n~Dfei~~f~p~lsrlLdvlvtLaqtGpfEispqytS~~sqtkltgf 439 (2799)
T KOG1788|consen 360 SMPKDIVFAFDHNDSKKQPPLQNDDSETLNSRQNDDFEIKHFSPALSRLLDVLVTLAQTGPFEISPQYTSLLSQTKLTGF 439 (2799)
T ss_pred cCCcCceeeccccccccCCccccccccccccccccchhhhhccHHHHHHHHHHHHHHhcCCcccCcccccccccccCccc
Confidence 22 1124567899999999999999999999996554467899999
Q ss_pred cCCCCCCC-----Cccc------cccccccccchHHHHHHHH-------HHHHHHHHHHhhhCCCchHHHHHhhcccc
Q psy7103 378 CMPQPSGR-----GKFK------LRSLDGRKKNDSELEGLLA-------VNRLCHKLLSKLLGLDDYDAMLHEANHNV 437 (467)
Q Consensus 378 ~~p~p~~~-----G~~t------VrNl~AFq~l~veL~~l~~-------~nrL~h~lLs~~l~ld~f~~~l~E~n~~v 437 (467)
..|.|.++ |. + ||||.|||++|..|.+.-. +||| |++.+.|-+.|-.++=+.-+.-.|
T Consensus 440 srpitasn~~~ydel-seqgsgkVkdLeAvqmLqdiFLkaenkdlqaeVlnrm-fkIftshpeNYricqelytvpllv 515 (2799)
T KOG1788|consen 440 SRPITASNNNRYDEL-SEQGSGKVKDLEAVQMLQDIFLKAENKDLQAEVLNRM-FKIFTSHPENYRICQELYTVPLLV 515 (2799)
T ss_pred ccCcCCCCccccccc-hhhcCCcccchHHHHHHHHHHHHhcCcchhhHHHHHH-HHHhccChHHhhHHhhccccchhh
Confidence 99999998 66 5 9999999999999988642 7888 999999988887776655555444
No 2
>KOG3534|consensus
Probab=99.92 E-value=9.8e-27 Score=248.69 Aligned_cols=68 Identities=79% Similarity=1.379 Sum_probs=67.3
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhCCCchHHHHHhhccccccCCchHHHHHHHHHhhcccccccccCCCC
Q psy7103 400 DSELEGLLAVNRLCHKLLSKLLGLDDYDAMLHEANHNVLAPYGRITLHIFWELNYDFLPNYCYNGATN 467 (467)
Q Consensus 400 ~veL~~l~~~nrL~h~lLs~~l~ld~f~~~l~E~n~~v~s~~gri~~hv~~el~~d~~pn~~~n~~t~ 467 (467)
+|||++|+|+|||||+|||+||+||+||+|++||||||.+||||||+||||||||||+||||||++||
T Consensus 790 IVELd~Lle~NRl~H~LLs~~l~ld~FD~mf~EANHnV~aPyGRITLHVFwELNyDFlpNycYNgsTn 857 (1253)
T KOG3534|consen 790 IVELDGLLEINRLCHKLLSKYLTLDPFDAMFREANHNVSAPYGRITLHVFWELNYDFLPNYCYNGSTN 857 (1253)
T ss_pred hhhhHhHHHHHHHHHHHHHHHhccCchHHHHHHhccccCCCCceeEEEEeeeeccccchhhhccCccc
Confidence 79999999999999999999999999999999999999999999999999999999999999999997
No 3
>PF05994 FragX_IP: Cytoplasmic Fragile-X interacting family; InterPro: IPR008081 Cytoplasmic fragile X mental retardation protein (FMRP) interacting protein belongs to a highly conserved but, as yet, functionally uncharacterised family. Absence of FMRP is responsible for pathologic manifestations in Fragile X Syndrome, the most frequent cause of inherited mental retardation []. FMRP is an RNA-binding protein that may have a role in local protein translation at neuronal dendrites and in dendritic spine maturation []. CYFIP1 and CYFIP2, which share a high level of sequence identity, have recently been identified as cytoplasmic FMRP interacting proteins []. CYFIP2 interacts with FMRP-related proteins FXR1P/2P, while CYFIP1 interacts exclusively with FMRP. The FMRP-CYFIP interaction involves the domain of FMRP that also mediates homo- and heteromerisation, suggesting competition between the various interaction partners. CYFIP1 also interacts with the small GTPase Rac1 implicated in development and maintenance of neuronal structures. CYFIP1/2 are both present in synaptosomal extracts []. PIR121 (121F-specific p53 inducible RNA) is another functionally uncharacterised member of this family. The PIR121 gene maps to human chromosome 5q34, a region frequently translocated in acute myeloid leukaemia but not known to be amplified or deleted in solid tumours. Interaction between PIR121 and FMRP has been demonstrated, and hence PIR121 has also been termed CYFIP2 (Cytoplasmic FMRP Interacting Protein 2) [, ]. Shyc (Selective HYbridizing Clone) is a cytoplasmic protein of unknown function, expressed in the developing and embryonic nervous system. The protein has also been designated CYFIP1 due to the high sequence identity (98.7%) to its human orthologue. The CYFIP orthologues in Caenorhabditis elegans and Drosophila melanogaster (Fruit fly) share about 51% and 67% sequence identity with the human proteins, respectively []. The high level of conservation manifest throughout the entire CYFIP sequence between various orthologues suggests a number of functionally/structurally important domains. ; PDB: 3P8C_A.
Probab=99.83 E-value=3.7e-21 Score=214.25 Aligned_cols=68 Identities=69% Similarity=1.182 Sum_probs=61.0
Q ss_pred hHHHHHHHHHHHHHHHHHHhhh-CCCchHHHHHhhccccc--cCCchHHHHHHHHHhhcccccccccCCCC
Q psy7103 400 DSELEGLLAVNRLCHKLLSKLL-GLDDYDAMLHEANHNVL--APYGRITLHIFWELNYDFLPNYCYNGATN 467 (467)
Q Consensus 400 ~veL~~l~~~nrL~h~lLs~~l-~ld~f~~~l~E~n~~v~--s~~gri~~hv~~el~~d~~pn~~~n~~t~ 467 (467)
++||++++++||+||+|||+|+ +|||||+|++||||+|+ ||+|||++||||||++||+||||||++|+
T Consensus 405 ivele~ll~i~r~TH~LLse~l~~Ld~Fd~ml~Ean~~vs~~s~~gRI~~hv~~eL~~D~~PNy~yn~~T~ 475 (820)
T PF05994_consen 405 IVELEHLLDILRLTHRLLSEHLLSLDPFDDMLREANHNVSPVSPYGRITLHVFWELNYDFLPNYCYNSSTQ 475 (820)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTS-----HHHHHHHHTT-SS--SSS-HHHHHHHHHHHHTHHHHEEEETTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccCCcHHHHHHHHhccccccccccHHHHHHHHHHhcccccCceeeCCCC
Confidence 8999999999999999999999 99999999999999996 99999999999999999999999999996
No 4
>PLN03099 PIR Protein PIR; Provisional
Probab=99.82 E-value=8.5e-21 Score=213.39 Aligned_cols=68 Identities=34% Similarity=0.553 Sum_probs=66.4
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhCCCchHHHHHhhcc--ccccCCchHHHHHHHHHhhcccccccccCCCC
Q psy7103 400 DSELEGLLAVNRLCHKLLSKLLGLDDYDAMLHEANH--NVLAPYGRITLHIFWELNYDFLPNYCYNGATN 467 (467)
Q Consensus 400 ~veL~~l~~~nrL~h~lLs~~l~ld~f~~~l~E~n~--~v~s~~gri~~hv~~el~~d~~pn~~~n~~t~ 467 (467)
+|||++++++||+||+|||+||+|||||+|++|||| +++|++||||+||||||+|||+||||||++||
T Consensus 751 ivele~ll~ilr~TH~LLse~L~LdpFd~m~~Ean~~~s~~S~~sri~~hv~~el~~Df~PNy~~n~~T~ 820 (1232)
T PLN03099 751 VVELQRLVEILRLTHELLSEHLSIDPFSLMLGEMQENISLVSFSSRLASQIWSEMQNDFLPNFILCNTTQ 820 (1232)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHhccCCccchhhHHHHHHHHHHhccccccceecCccc
Confidence 899999999999999999999999999999999999 55999999999999999999999999999996
No 5
>KOG1788|consensus
Probab=97.36 E-value=0.00037 Score=80.03 Aligned_cols=241 Identities=12% Similarity=0.132 Sum_probs=152.8
Q ss_pred CCccchHHHHHHHHHHhhccCCCCChHHHHHHHhhhhhHHHHHhcCC-----------Cch--------hhHHhhhhhhh
Q psy7103 25 QHSALGVMHLKKLFAEFSHSVNHLSEKEKDDKLYNMLPLFCKVFGNS-----------NSA--------DMTDKFRDVHQ 85 (467)
Q Consensus 25 ~~~~l~L~~Lrr~f~Ef~~~~~~~s~kEke~~L~~~LPLFckv~~~~-----------~~~--------~~v~~F~~~~~ 85 (467)
+.+.++|+|+|++|.||..+|.+.|.......| +|+|.|+-.=+ ++. +..++|.|+..
T Consensus 16 dartlsLLHlrktfsdytkpPsSsSrSnsPSfl---lPlfHkfnNFSpisrdkmfleldfkrmweefrsssseeeKEaal 92 (2799)
T KOG1788|consen 16 DARTLSLLHLRKTFSDYTKPPSSSSRSNSPSFL---LPLFHKFNNFSPISRDKMFLELDFKRMWEEFRSSSSEEEKEAAL 92 (2799)
T ss_pred hhhhhhhhhhccccccccCCCCCCCCCCCcchh---hhhhhhcccCCchhhhhhhhhccHHHHHHhchhhccHHHHHHHH
Confidence 446789999999999999988777777666666 89998874111 233 44456777888
Q ss_pred hHHHHHHHHHHHHHHHhccCChHHHHHHHHHHhhHhcCCCCchhhhHHHHHH----HHhcCChhHHHHHHhcCChhHHHH
Q psy7103 86 FCDHVSRLMVTKVCQRASNQSTEIASCAIAKFLEIENSEESSSGWMLLSTLN----LLAAGDVSLVEVMTKASLPSTLVK 161 (467)
Q Consensus 86 Fa~~vsr~lV~eI~k~~~~q~~e~A~~aI~~fl~~~~~e~~s~G~~LL~sl~----lLs~~~~~~v~~m~~agLPStLVk 161 (467)
|+.+.+.-.+.+++.++..-.|-++...|..|+- +...-.|+..|++.. .|-+.... .|++
T Consensus 93 nlTvlcfcrlvkvhanvdqlvTmlveqhIfsFvi---grafvkdyekLkagss~ganLLtaeev---lmsg--------- 157 (2799)
T KOG1788|consen 93 NLTVLCFCRLVKVHANVDQLVTMLVEQHIFSFVI---GRAFVKDYEKLKAGSSHGANLLTAEEV---LMSG--------- 157 (2799)
T ss_pred hhhheeeeeeeHHhhhhhhhhhhhhHhhHHHHhc---CccccccchhhhccccccchhhhhhHH---HhhC---------
Confidence 8888888899999999999999999999999984 666778999999886 22222111 2222
Q ss_pred HHHHhhcCCCCChhhhhccCCCCCCchhHHHHHHHHHHHHHHHHHhcCCcccccccccC----------------chhHH
Q psy7103 162 CLYLFFDLPQMNEEEANITDVNSDFTPRERRILLQKIFVQLLVRLCSHSAPAEELSNKD----------------DLTLL 225 (467)
Q Consensus 162 cLYLffdlP~~~~~~~~~~~~~s~~~~~e~r~~~q~~~vqiL~~Lc~~~~~~EeL~~~D----------------dLqlL 225 (467)
|..+-.- -+..+.-.+++..+++..+-..+..|.+++ ..-..
T Consensus 158 --------padKqSL--------------ldsgikcclihfdlaalAytvtstdltegatEvedeekknnekvegsvvqI 215 (2799)
T KOG1788|consen 158 --------PADKQSL--------------LDSGIKCCLIHFDLAALAYTVTSTDLTEGATEVEDEEKKNNEKVEGSVVQI 215 (2799)
T ss_pred --------chhhhcc--------------ccccceehhhhhccHhhhhhhhhcccccCcchhhHHHhhhhhhhhhHHHHH
Confidence 2111100 011223344555666665555555555432 22233
Q ss_pred HHHHhC-CCCCCccchhHHHHHHHHHHhhc----------------------------------CCChhhHHHHhhhcHH
Q psy7103 226 FSAITS-LCPPYNVIWRKSAAEILMSLSSQ----------------------------------ALTPKVVQYVHDKGCI 270 (467)
Q Consensus 226 F~~~ts-~cp~~n~~WR~~a~~vL~~iS~~----------------------------------~lt~~vi~YI~~k~cI 270 (467)
.-++.+ .|..... -|+.....|-.-..+ ....+|+.||+.+..|
T Consensus 216 MkaLasfpsaaqsL-iedDsLllLFvmvangs~~~fs~~k~glVaehNiqlhklamqiLglllvnDngsTaayIrkhhli 294 (2799)
T KOG1788|consen 216 MKALASFPSAAQSL-IEDDSLLLLFVMVANGSLMAFSRFKVGLVAEHNIQLHKLAMQILGLLLVNDNGSTAAYIRKHHLI 294 (2799)
T ss_pred HHHHhcCchHHHHh-hccccHHHHHHHhccccchhhhhhccchhhhhHHHHHHHHHHHHhHHhhcCCccHHHHHHHHHHH
Confidence 333332 1111110 011111111000111 2356789999999999
Q ss_pred HHHHHHHhhcCCCCCChHHHHHHHHHHHHHhhhchh
Q psy7103 271 ALCIENMTRRKGQDLTPLEIVEMFVSVFCFLKDSSE 306 (467)
Q Consensus 271 ~~~l~nl~~~~~~~~s~~e~ve~~~~v~~fLkdS~~ 306 (467)
|..+..+++....-..-.|+.+++.+++|++.-||.
T Consensus 295 KvllmaVKnfdpacgdsaytqgivdlllecvelsyr 330 (2799)
T KOG1788|consen 295 KVLLMAVKNFDPACGDSAYTQGIVDLLLECVELSYR 330 (2799)
T ss_pred HHHHHHHhhcCCCCCchHhHHHHHHHHHHHHHHhcC
Confidence 999999999965566678999999999988776654
No 6
>PF10508 Proteasom_PSMB: Proteasome non-ATPase 26S subunit; InterPro: IPR019538 The 26S proteasome is an enzymatic complex that degrades ubiquitinated proteins in eukaryotic cells. 26S proteasome non-ATPase regulatory subunit 5 is one of a number of chaperones that are involved in the assembly of the proteasome. The chaperones dissociate before 26S proteasome formation is complete [].; GO: 0044183 protein binding involved in protein folding
Probab=90.11 E-value=21 Score=39.05 Aligned_cols=133 Identities=20% Similarity=0.324 Sum_probs=99.2
Q ss_pred hHHHHHHHHhcCChhHHHHHHhcCChhHHHHHHHHhhcCCCCChhhhhccCCCCCCchhHHHHHHHHHHHHHHHHHhcCC
Q psy7103 131 MLLSTLNLLAAGDVSLVEVMTKASLPSTLVKCLYLFFDLPQMNEEEANITDVNSDFTPRERRILLQKIFVQLLVRLCSHS 210 (467)
Q Consensus 131 ~LL~sl~lLs~~~~~~v~~m~~agLPStLVkcLYLffdlP~~~~~~~~~~~~~s~~~~~e~r~~~q~~~vqiL~~Lc~~~ 210 (467)
..++.|.-++..+...++.+.+.++-..++.||- . .+..+.+.-..+|.+|++++
T Consensus 96 l~l~~l~~~~~~~~~~~~~~~~~~l~~~i~~~L~-------~------------------~d~~Va~~A~~~L~~l~~~~ 150 (503)
T PF10508_consen 96 LALKQLGRIARHSEGAAQLLVDNELLPLIIQCLR-------D------------------PDLSVAKAAIKALKKLASHP 150 (503)
T ss_pred HHHHHHHHHhcCCHHHHHHhcCccHHHHHHHHHc-------C------------------CcHHHHHHHHHHHHHHhCCc
Confidence 3456677777776666777788888888777761 1 13556788889999999999
Q ss_pred cccccccccCchhHHHHHHhCCCCCCccchhHHHHHHHHHHhhcCCChhhHHHHhhhcHHHHHHHHHhhcCCCCCChHHH
Q psy7103 211 APAEELSNKDDLTLLFSAITSLCPPYNVIWRKSAAEILMSLSSQALTPKVVQYVHDKGCIALCIENMTRRKGQDLTPLEI 290 (467)
Q Consensus 211 ~~~EeL~~~DdLqlLF~~~ts~cp~~n~~WR~~a~~vL~~iS~~~lt~~vi~YI~~k~cI~~~l~nl~~~~~~~~s~~e~ 290 (467)
...+.|...+-+..|-..+.. .|-.-|-.+.+++..|+ ..++.+.+|+.++|.+..++..+... |.+--.-.
T Consensus 151 ~~~~~l~~~~~~~~L~~l~~~----~~~~vR~Rv~el~v~i~--~~S~~~~~~~~~sgll~~ll~eL~~d--DiLvqlna 222 (503)
T PF10508_consen 151 EGLEQLFDSNLLSKLKSLMSQ----SSDIVRCRVYELLVEIA--SHSPEAAEAVVNSGLLDLLLKELDSD--DILVQLNA 222 (503)
T ss_pred hhHHHHhCcchHHHHHHHHhc----cCHHHHHHHHHHHHHHH--hcCHHHHHHHHhccHHHHHHHHhcCc--cHHHHHHH
Confidence 999999888877777777643 34455777889999998 46899999999999999999999886 65333344
Q ss_pred HHHHHH
Q psy7103 291 VEMFVS 296 (467)
Q Consensus 291 ve~~~~ 296 (467)
+|++.-
T Consensus 223 lell~~ 228 (503)
T PF10508_consen 223 LELLSE 228 (503)
T ss_pred HHHHHH
Confidence 444433
No 7
>PF05804 KAP: Kinesin-associated protein (KAP)
Probab=84.64 E-value=67 Score=37.17 Aligned_cols=157 Identities=22% Similarity=0.222 Sum_probs=109.9
Q ss_pred hHHHHHHHHh--cCChhHHHHHHhcCChhHHHHHHHHhhcCCCCChhhhhccCCCCCCchhHHHHHHHHHHHHHHHHHhc
Q psy7103 131 MLLSTLNLLA--AGDVSLVEVMTKASLPSTLVKCLYLFFDLPQMNEEEANITDVNSDFTPRERRILLQKIFVQLLVRLCS 208 (467)
Q Consensus 131 ~LL~sl~lLs--~~~~~~v~~m~~agLPStLVkcLYLffdlP~~~~~~~~~~~~~s~~~~~e~r~~~q~~~vqiL~~Lc~ 208 (467)
+|--++++|. +.+..+..+|.+.|+-+.|||||- .+ ...+.-..+..|.+|+-
T Consensus 265 Llrv~~~lLlNLAed~~ve~kM~~~~iV~~Lv~~Ld--------r~-----------------n~ellil~v~fLkkLSi 319 (708)
T PF05804_consen 265 LLRVAFYLLLNLAEDPRVELKMVNKGIVSLLVKCLD--------RE-----------------NEELLILAVTFLKKLSI 319 (708)
T ss_pred HHHHHHHHHHHHhcChHHHHHHHhcCCHHHHHHHHc--------CC-----------------CHHHHHHHHHHHHHHcC
Confidence 3434444443 233446789999999999999982 11 12244557799999999
Q ss_pred CCcccccccccCchhHHHHHHhCCCCCCccchhHHHHHHHHHHhhcCCChhhHHHHhhhcHHHHHHHHHhhcCCCCCChH
Q psy7103 209 HSAPAEELSNKDDLTLLFSAITSLCPPYNVIWRKSAAEILMSLSSQALTPKVVQYVHDKGCIALCIENMTRRKGQDLTPL 288 (467)
Q Consensus 209 ~~~~~EeL~~~DdLqlLF~~~ts~cp~~n~~WR~~a~~vL~~iS~~~lt~~vi~YI~~k~cI~~~l~nl~~~~~~~~s~~ 288 (467)
++.+-.++.+.+-+..|...+-+ .|...++.|..+|..+|-+ +..-+.+.+.|||.-++.=+.+. .
T Consensus 320 ~~ENK~~m~~~giV~kL~kLl~s----~~~~l~~~aLrlL~NLSfd---~~~R~~mV~~GlIPkLv~LL~d~---~---- 385 (708)
T PF05804_consen 320 FKENKDEMAESGIVEKLLKLLPS----ENEDLVNVALRLLFNLSFD---PELRSQMVSLGLIPKLVELLKDP---N---- 385 (708)
T ss_pred CHHHHHHHHHcCCHHHHHHHhcC----CCHHHHHHHHHHHHHhCcC---HHHHHHHHHCCCcHHHHHHhCCC---c----
Confidence 99999999999999999998843 5667899999999999843 48899999999999888766543 1
Q ss_pred HHHHHHHHHHHHhhhchhhhHHHHHHHHhccChHHHHHHHHhh
Q psy7103 289 EIVEMFVSVFCFLKDSSEVSQILLKDFKEAHGYTFLKNFLINL 331 (467)
Q Consensus 289 e~ve~~~~v~~fLkdS~~~S~~LlddF~~~~GY~fL~~flLr~ 331 (467)
..+++..++.-|.. ...-..-|...+.-++|.+.++..
T Consensus 386 -~~~val~iLy~LS~----dd~~r~~f~~TdcIp~L~~~Ll~~ 423 (708)
T PF05804_consen 386 -FREVALKILYNLSM----DDEARSMFAYTDCIPQLMQMLLEN 423 (708)
T ss_pred -hHHHHHHHHHHhcc----CHhhHHHHhhcchHHHHHHHHHhC
Confidence 11222222222211 113345677778888888888775
No 8
>KOG2160|consensus
Probab=80.16 E-value=19 Score=38.07 Aligned_cols=115 Identities=12% Similarity=0.210 Sum_probs=83.6
Q ss_pred CCCCccchhHHHHHHHHHHhhcCCChhhHHHHhhhcHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHhhhchhhhHHHH
Q psy7103 233 CPPYNVIWRKSAAEILMSLSSQALTPKVVQYVHDKGCIALCIENMTRRKGQDLTPLEIVEMFVSVFCFLKDSSEVSQILL 312 (467)
Q Consensus 233 cp~~n~~WR~~a~~vL~~iS~~~lt~~vi~YI~~k~cI~~~l~nl~~~~~~~~s~~e~ve~~~~v~~fLkdS~~~S~~Ll 312 (467)
-...+...|+.|++|+.++++| +|.+-.-+-..|=-+.++.++++. ++ -...+-+.-++.+-|+.--+. .
T Consensus 133 l~~~~~~lR~~Aa~Vigt~~qN--NP~~Qe~v~E~~~L~~Ll~~ls~~--~~--~~~r~kaL~AissLIRn~~~g----~ 202 (342)
T KOG2160|consen 133 LENSDAELRELAARVIGTAVQN--NPKSQEQVIELGALSKLLKILSSD--DP--NTVRTKALFAISSLIRNNKPG----Q 202 (342)
T ss_pred hcCCcHHHHHHHHHHHHHHHhc--CHHHHHHHHHcccHHHHHHHHccC--CC--chHHHHHHHHHHHHHhcCcHH----H
Confidence 3457788999999999999876 588889999999889999999865 32 134477777777777776554 4
Q ss_pred HHHHhccChHHHHHHHHhhccCCChhHHHHHHHHHHHHHHhHhhcccccc
Q psy7103 313 KDFKEAHGYTFLKNFLINLENDRSSEAQEAIRNLILMIATLSMCGYVELR 362 (467)
Q Consensus 313 ddF~~~~GY~fL~~flLr~e~~~~~e~~~~l~~Ll~li~sLt~cG~~ELk 362 (467)
+.|...+||..|.+.+-+-. ...-.-|-.+.|+..|+.--+.+-.
T Consensus 203 ~~fl~~~G~~~L~~vl~~~~-----~~~~lkrK~~~Ll~~Ll~~~~s~~d 247 (342)
T KOG2160|consen 203 DEFLKLNGYQVLRDVLQSNN-----TSVKLKRKALFLLSLLLQEDKSDED 247 (342)
T ss_pred HHHHhcCCHHHHHHHHHcCC-----cchHHHHHHHHHHHHHHHhhhhhhh
Confidence 78999999999999874311 1223356666777777665555544
No 9
>cd00020 ARM Armadillo/beta-catenin-like repeats. An approximately 40 amino acid long tandemly repeated sequence motif first identified in the Drosophila segment polarity gene armadillo; these repeats were also found in the mammalian armadillo homolog beta-catenin, the junctional plaque protein plakoglobin, the adenomatous polyposis coli (APC) tumor suppressor protein, and a number of other proteins. ARM has been implicated in mediating protein-protein interactions, but no common features among the target proteins recognized by the ARM repeats have been identified; related to the HEAT domain; three consecutive copies of the repeat are represented by this alignment model.
Probab=77.62 E-value=23 Score=28.98 Aligned_cols=90 Identities=13% Similarity=0.080 Sum_probs=69.8
Q ss_pred HHHHHHHHHHhcC-CcccccccccCchhHHHHHHhCCCCCCccchhHHHHHHHHHHhhcCCChhhHHHHhhhcHHHHHHH
Q psy7103 197 KIFVQLLVRLCSH-SAPAEELSNKDDLTLLFSAITSLCPPYNVIWRKSAAEILMSLSSQALTPKVVQYVHDKGCIALCIE 275 (467)
Q Consensus 197 ~~~vqiL~~Lc~~-~~~~EeL~~~DdLqlLF~~~ts~cp~~n~~WR~~a~~vL~~iS~~~lt~~vi~YI~~k~cI~~~l~ 275 (467)
..-+..|..+|++ |...+..++.+-+..|...+.+ .+..-++.|...|..++++ .+.....++++|.++.+++
T Consensus 25 ~~a~~~l~~l~~~~~~~~~~~~~~~~i~~l~~~l~~----~~~~v~~~a~~~L~~l~~~--~~~~~~~~~~~g~l~~l~~ 98 (120)
T cd00020 25 REAAWALSNLSAGNNDNIQAVVEAGGLPALVQLLKS----EDEEVVKAALWALRNLAAG--PEDNKLIVLEAGGVPKLVN 98 (120)
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHCCChHHHHHHHhC----CCHHHHHHHHHHHHHHccC--cHHHHHHHHHCCChHHHHH
Confidence 4456778889988 8888888888888888888865 4778899999999999853 3567788889999999999
Q ss_pred HHhhcCCCCCChHHHHHHHHHHH
Q psy7103 276 NMTRRKGQDLTPLEIVEMFVSVF 298 (467)
Q Consensus 276 nl~~~~~~~~s~~e~ve~~~~v~ 298 (467)
.+... + .++.+.+..++
T Consensus 99 ~l~~~--~----~~~~~~a~~~l 115 (120)
T cd00020 99 LLDSS--N----EDIQKNATGAL 115 (120)
T ss_pred HHhcC--C----HHHHHHHHHHH
Confidence 99875 2 34555544433
No 10
>PF04826 Arm_2: Armadillo-like; InterPro: IPR006911 This entry consists of mammalian proteins of unknown function.
Probab=66.95 E-value=1.5e+02 Score=29.95 Aligned_cols=151 Identities=13% Similarity=0.145 Sum_probs=82.2
Q ss_pred hhHHHHHHhcCChhHHHHHHHHhhcCCCCChhhhhccCCCCCCchhHHHHHHHHHHHHHHHHHhcCCccc----------
Q psy7103 144 VSLVEVMTKASLPSTLVKCLYLFFDLPQMNEEEANITDVNSDFTPRERRILLQKIFVQLLVRLCSHSAPA---------- 213 (467)
Q Consensus 144 ~~~v~~m~~agLPStLVkcLYLffdlP~~~~~~~~~~~~~s~~~~~e~r~~~q~~~vqiL~~Lc~~~~~~---------- 213 (467)
.+++..|++..-|..=.|.|..+-.+....+ .+.+++..+-|++..+-++|...
T Consensus 56 i~lI~~lL~~p~~~vr~~AL~aL~Nls~~~e----------------n~~~Ik~~i~~Vc~~~~s~~lns~~Q~agLrlL 119 (254)
T PF04826_consen 56 ISLIGSLLNDPNPSVREKALNALNNLSVNDE----------------NQEQIKMYIPQVCEETVSSPLNSEVQLAGLRLL 119 (254)
T ss_pred HHHHHHHcCCCChHHHHHHHHHHHhcCCChh----------------hHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHH
Confidence 4456666666666666666666655433322 23334444444444444443211
Q ss_pred ---------ccccccCchhHHHHHHhCCCCCCccchhHHHHHHHHHHhhcCCChhhHHHHhhhcHHHHHHHHHhhcCCCC
Q psy7103 214 ---------EELSNKDDLTLLFSAITSLCPPYNVIWRKSAAEILMSLSSQALTPKVVQYVHDKGCIALCIENMTRRKGQD 284 (467)
Q Consensus 214 ---------EeL~~~DdLqlLF~~~ts~cp~~n~~WR~~a~~vL~~iS~~~lt~~vi~YI~~k~cI~~~l~nl~~~~~~~ 284 (467)
..++. +.+..||..+. .-+..+|.++..+|.-+|. +|..++++-+.++..-++ .+.+.+.+
T Consensus 120 ~nLtv~~~~~~~l~-~~i~~ll~LL~----~G~~~~k~~vLk~L~nLS~---np~~~~~Ll~~q~~~~~~-~Lf~~~~~- 189 (254)
T PF04826_consen 120 TNLTVTNDYHHMLA-NYIPDLLSLLS----SGSEKTKVQVLKVLVNLSE---NPDMTRELLSAQVLSSFL-SLFNSSES- 189 (254)
T ss_pred HccCCCcchhhhHH-hhHHHHHHHHH----cCChHHHHHHHHHHHHhcc---CHHHHHHHHhccchhHHH-HHHccCCc-
Confidence 12221 13444444443 3567788899999999984 458888888888877776 44443122
Q ss_pred CChHHHHHHHHHHHHHhhhchhhhHHHHHHHHhccChHH
Q psy7103 285 LTPLEIVEMFVSVFCFLKDSSEVSQILLKDFKEAHGYTF 323 (467)
Q Consensus 285 ~s~~e~ve~~~~v~~fLkdS~~~S~~LlddF~~~~GY~f 323 (467)
.++.-.+..+|.-|.+.......+..+-+-+.|+-|
T Consensus 190 ---~~~l~~~l~~~~ni~~~~~~~~~~~~~~~~~~~~L~ 225 (254)
T PF04826_consen 190 ---KENLLRVLTFFENINENIKKEAYVFVQDDFSEDSLF 225 (254)
T ss_pred ---cHHHHHHHHHHHHHHHhhCcccceeccccCCchhHH
Confidence 455555555566566655555444433333334433
No 11
>PF05804 KAP: Kinesin-associated protein (KAP)
Probab=65.53 E-value=2.7e+02 Score=32.44 Aligned_cols=118 Identities=16% Similarity=0.246 Sum_probs=77.2
Q ss_pred HHHHHHHHHHHHhcCCcccccccccCchhHHHHHHhCCCCCCccchhHHHHHHHHHHhhcCCChhhHHHHhhhcHHHHHH
Q psy7103 195 LQKIFVQLLVRLCSHSAPAEELSNKDDLTLLFSAITSLCPPYNVIWRKSAAEILMSLSSQALTPKVVQYVHDKGCIALCI 274 (467)
Q Consensus 195 ~q~~~vqiL~~Lc~~~~~~EeL~~~DdLqlLF~~~ts~cp~~n~~WR~~a~~vL~~iS~~~lt~~vi~YI~~k~cI~~~l 274 (467)
++..-.++|.+|+.++..-+.+++..=+..|-..+.. ..+|..|..+|-.+|...-+ -..+-..+||...+
T Consensus 347 l~~~aLrlL~NLSfd~~~R~~mV~~GlIPkLv~LL~d------~~~~~val~iLy~LS~dd~~---r~~f~~TdcIp~L~ 417 (708)
T PF05804_consen 347 LVNVALRLLFNLSFDPELRSQMVSLGLIPKLVELLKD------PNFREVALKILYNLSMDDEA---RSMFAYTDCIPQLM 417 (708)
T ss_pred HHHHHHHHHHHhCcCHHHHHHHHHCCCcHHHHHHhCC------CchHHHHHHHHHHhccCHhh---HHHHhhcchHHHHH
Confidence 4666779999999999999999999888888877753 34777899999999865533 44445567999998
Q ss_pred HHHhhcCCCCCChHHHHHHHHHHHHHhhhchhhhHHHHHHHHhccChHHHHHHHHh
Q psy7103 275 ENMTRRKGQDLTPLEIVEMFVSVFCFLKDSSEVSQILLKDFKEAHGYTFLKNFLIN 330 (467)
Q Consensus 275 ~nl~~~~~~~~s~~e~ve~~~~v~~fLkdS~~~S~~LlddF~~~~GY~fL~~flLr 330 (467)
+-+....+.... .+.+..++- |.-..+.. +.+-.++|-+.|.+.+++
T Consensus 418 ~~Ll~~~~~~v~-~eliaL~iN----La~~~rna----qlm~~g~gL~~L~~ra~~ 464 (708)
T PF05804_consen 418 QMLLENSEEEVQ-LELIALLIN----LALNKRNA----QLMCEGNGLQSLMKRALK 464 (708)
T ss_pred HHHHhCCCcccc-HHHHHHHHH----HhcCHHHH----HHHHhcCcHHHHHHHHHh
Confidence 888875333322 233222222 11111111 233346777777766655
No 12
>KOG0166|consensus
Probab=65.19 E-value=47 Score=37.05 Aligned_cols=136 Identities=19% Similarity=0.258 Sum_probs=89.1
Q ss_pred hHHHHHHHHhcCChhHHHHHHhcCChhHHHHHHHHh---hcCCCCChhhhhc-cCCCCCCchhHHHHHHHHHHHHHHHHH
Q psy7103 131 MLLSTLNLLAAGDVSLVEVMTKASLPSTLVKCLYLF---FDLPQMNEEEANI-TDVNSDFTPRERRILLQKIFVQLLVRL 206 (467)
Q Consensus 131 ~LL~sl~lLs~~~~~~v~~m~~agLPStLVkcLYLf---fdlP~~~~~~~~~-~~~~s~~~~~e~r~~~q~~~vqiL~~L 206 (467)
+-.-||..|+-++.+.+|.++++|+..-||++|-.. +..|.-..- +++ +|+ +.+....+--..+..|..|
T Consensus 256 Da~WAlsyLsdg~ne~iq~vi~~gvv~~LV~lL~~~~~~v~~PaLRai-GNIvtG~-----d~QTq~vi~~~~L~~l~~l 329 (514)
T KOG0166|consen 256 DACWALSYLTDGSNEKIQMVIDAGVVPRLVDLLGHSSPKVVTPALRAI-GNIVTGS-----DEQTQVVINSGALPVLSNL 329 (514)
T ss_pred HHHHHHHHHhcCChHHHHHHHHccchHHHHHHHcCCCcccccHHHhhc-cceeecc-----HHHHHHHHhcChHHHHHHH
Confidence 446789999999999999999999999999998655 222332221 112 222 2333333322233344444
Q ss_pred hc-CCc--------------------ccccccccCchhHHHHHHhCCCCCCccchhHHHHHHHHHHhhcCCChhhHHHHh
Q psy7103 207 CS-HSA--------------------PAEELSNKDDLTLLFSAITSLCPPYNVIWRKSAAEILMSLSSQALTPKVVQYVH 265 (467)
Q Consensus 207 c~-~~~--------------------~~EeL~~~DdLqlLF~~~ts~cp~~n~~WR~~a~~vL~~iS~~~lt~~vi~YI~ 265 (467)
.+ +|. -++..+..+=+..|...+.+ .-..-||-|+.++..+...| ++.-+.|+-
T Consensus 330 l~~s~~~~ikkEAcW~iSNItAG~~~qiqaVida~l~p~Li~~l~~----~ef~~rKEAawaIsN~ts~g-~~~qi~yLv 404 (514)
T KOG0166|consen 330 LSSSPKESIKKEACWTISNITAGNQEQIQAVIDANLIPVLINLLQT----AEFDIRKEAAWAISNLTSSG-TPEQIKYLV 404 (514)
T ss_pred hccCcchhHHHHHHHHHHHhhcCCHHHHHHHHHcccHHHHHHHHhc----cchHHHHHHHHHHHhhcccC-CHHHHHHHH
Confidence 43 221 34455556666666666643 22567999999999996545 699999999
Q ss_pred hhcHHHHHHHHH
Q psy7103 266 DKGCIALCIENM 277 (467)
Q Consensus 266 ~k~cI~~~l~nl 277 (467)
..|||+-+-.=+
T Consensus 405 ~~giI~plcdlL 416 (514)
T KOG0166|consen 405 EQGIIKPLCDLL 416 (514)
T ss_pred HcCCchhhhhcc
Confidence 999999887766
No 13
>PLN03200 cellulose synthase-interactive protein; Provisional
Probab=61.63 E-value=2.3e+02 Score=36.96 Aligned_cols=117 Identities=22% Similarity=0.157 Sum_probs=87.8
Q ss_pred HHHHHHHhcCChhHHHHHHhcCChhHHHHHHHHhhcCCCCChhhhhccCCCCCCchhHHHHHHHHHHHHHHHHHhcC-Cc
Q psy7103 133 LSTLNLLAAGDVSLVEVMTKASLPSTLVKCLYLFFDLPQMNEEEANITDVNSDFTPRERRILLQKIFVQLLVRLCSH-SA 211 (467)
Q Consensus 133 L~sl~lLs~~~~~~v~~m~~agLPStLVkcLYLffdlP~~~~~~~~~~~~~s~~~~~e~r~~~q~~~vqiL~~Lc~~-~~ 211 (467)
..++.-|+..+....+.++++|.-..||+.|. ..+ ..+|..-..++.++|.+ +.
T Consensus 168 v~AL~nLs~~~en~~~~IIeaGaVp~LV~LLs-------S~d------------------~~lQ~eAa~aLa~Lass~ee 222 (2102)
T PLN03200 168 TGALRNLCGSTDGFWSATLEAGGVDILVKLLS-------SGN------------------SDAQANAASLLARLMMAFES 222 (2102)
T ss_pred HHHHHHHhcCccchHHHHHHcCCHHHHHHHHc-------CCC------------------HHHHHHHHHHHHHHHcCChH
Confidence 35666777766655566778888888888872 111 12234456778788876 77
Q ss_pred ccccccccCchhHHHHHHhCCCCCCccchhHHHHHHHHHHhhcCCChhhHHHHhhhcHHHHHHHHHhh
Q psy7103 212 PAEELSNKDDLTLLFSAITSLCPPYNVIWRKSAAEILMSLSSQALTPKVVQYVHDKGCIALCIENMTR 279 (467)
Q Consensus 212 ~~EeL~~~DdLqlLF~~~ts~cp~~n~~WR~~a~~vL~~iS~~~lt~~vi~YI~~k~cI~~~l~nl~~ 279 (467)
+.+..++..-+..|...+.+. .+..-|+.|..+|..|++ -++.-.++|.+.|.|..+|+.+..
T Consensus 223 ~~~aVIeaGaVP~LV~LL~sg---~~~~VRE~AA~AL~nLAs--~s~e~r~~Iv~aGgIp~LI~lL~s 285 (2102)
T PLN03200 223 SISKVLDAGAVKQLLKLLGQG---NEVSVRAEAAGALEALSS--QSKEAKQAIADAGGIPALINATVA 285 (2102)
T ss_pred HHHHHHHCCCHHHHHHHHccC---CChHHHHHHHHHHHHHhc--CCHHHHHHHHHCCCHHHHHHHHhC
Confidence 899999999999999988542 344679999999999984 368889999999999999998874
No 14
>PLN03200 cellulose synthase-interactive protein; Provisional
Probab=58.03 E-value=3e+02 Score=36.05 Aligned_cols=99 Identities=17% Similarity=0.126 Sum_probs=74.7
Q ss_pred HHHHHHHHHHHHHhcCCcccccccccCchhHHHHHHhCCCCCCccchhHHHHHHHHHHhhcCCChhhH-HHHhhhcHHHH
Q psy7103 194 LLQKIFVQLLVRLCSHSAPAEELSNKDDLTLLFSAITSLCPPYNVIWRKSAAEILMSLSSQALTPKVV-QYVHDKGCIAL 272 (467)
Q Consensus 194 ~~q~~~vqiL~~Lc~~~~~~EeL~~~DdLqlLF~~~ts~cp~~n~~WR~~a~~vL~~iS~~~lt~~vi-~YI~~k~cI~~ 272 (467)
.+...-...|-+|++++.++++....+-+..|...+-+ -+..=|++|...|..+.+++....+. .|++..|+|.-
T Consensus 709 ~v~e~Al~ALanLl~~~e~~~ei~~~~~I~~Lv~lLr~----G~~~~k~~Aa~AL~~L~~~~~~~~~~~~~~~~~g~v~~ 784 (2102)
T PLN03200 709 EVAEQAVCALANLLSDPEVAAEALAEDIILPLTRVLRE----GTLEGKRNAARALAQLLKHFPVDDVLKDSVQCRGTVLA 784 (2102)
T ss_pred HHHHHHHHHHHHHHcCchHHHHHHhcCcHHHHHHHHHh----CChHHHHHHHHHHHHHHhCCChhHHHHHHHHHhCcHHH
Confidence 34455667889999999999999999999999888844 34556999999999998777555544 99999999999
Q ss_pred HHHHHhhcCCCCCChHHHHHHHHH
Q psy7103 273 CIENMTRRKGQDLTPLEIVEMFVS 296 (467)
Q Consensus 273 ~l~nl~~~~~~~~s~~e~ve~~~~ 296 (467)
++.-++..+++.....+..+++..
T Consensus 785 l~~~L~~~~~~~~~~~~al~~l~~ 808 (2102)
T PLN03200 785 LVDLLNSTDLDSSATSEALEALAL 808 (2102)
T ss_pred HHHHHhcCCcchhhHHHHHHHHHH
Confidence 988888753444333334444444
No 15
>PF10508 Proteasom_PSMB: Proteasome non-ATPase 26S subunit; InterPro: IPR019538 The 26S proteasome is an enzymatic complex that degrades ubiquitinated proteins in eukaryotic cells. 26S proteasome non-ATPase regulatory subunit 5 is one of a number of chaperones that are involved in the assembly of the proteasome. The chaperones dissociate before 26S proteasome formation is complete [].; GO: 0044183 protein binding involved in protein folding
Probab=43.95 E-value=4.7e+02 Score=28.69 Aligned_cols=150 Identities=24% Similarity=0.337 Sum_probs=91.8
Q ss_pred HHHHHHHHhcCCccc-ccccccCchhHHHHHHhCCCCCCccchhHHHHHHHHHHhhcCCChhhHHHHhhhcHHHHHHHHH
Q psy7103 199 FVQLLVRLCSHSAPA-EELSNKDDLTLLFSAITSLCPPYNVIWRKSAAEILMSLSSQALTPKVVQYVHDKGCIALCIENM 277 (467)
Q Consensus 199 ~vqiL~~Lc~~~~~~-EeL~~~DdLqlLF~~~ts~cp~~n~~WR~~a~~vL~~iS~~~lt~~vi~YI~~k~cI~~~l~nl 277 (467)
+..+++.+|++...+ +......=+..++.-+.+ .-+--+..|.++|..++. ++.-.+||-+.|-+..++.-+
T Consensus 180 v~el~v~i~~~S~~~~~~~~~sgll~~ll~eL~~----dDiLvqlnalell~~La~---~~~g~~yL~~~gi~~~L~~~l 252 (503)
T PF10508_consen 180 VYELLVEIASHSPEAAEAVVNSGLLDLLLKELDS----DDILVQLNALELLSELAE---TPHGLQYLEQQGIFDKLSNLL 252 (503)
T ss_pred HHHHHHHHHhcCHHHHHHHHhccHHHHHHHHhcC----ccHHHHHHHHHHHHHHHc---ChhHHHHHHhCCHHHHHHHHH
Confidence 445666777775444 444445556666665544 455567889999999983 778899999999999999999
Q ss_pred hhcCCCC-CChHHHHHHHHHHHHHhhhchhhhHHHHHHHHhccChHHHHHHHHhh-ccCC----------------Chh-
Q psy7103 278 TRRKGQD-LTPLEIVEMFVSVFCFLKDSSEVSQILLKDFKEAHGYTFLKNFLINL-ENDR----------------SSE- 338 (467)
Q Consensus 278 ~~~~~~~-~s~~e~ve~~~~v~~fLkdS~~~S~~LlddF~~~~GY~fL~~flLr~-e~~~----------------~~e- 338 (467)
.+...|. ++..++.+.+ .|.-.-+.+++. .-.++|+-+...+.++ ++.. ..|
T Consensus 253 ~~~~~dp~~~~~~l~g~~----~f~g~la~~~~~-----~v~~~~p~~~~~l~~~~~s~d~~~~~~A~dtlg~igst~~G 323 (503)
T PF10508_consen 253 QDSEEDPRLSSLLLPGRM----KFFGNLARVSPQ-----EVLELYPAFLERLFSMLESQDPTIREVAFDTLGQIGSTVEG 323 (503)
T ss_pred hccccCCcccchhhhhHH----HHHHHHHhcChH-----HHHHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHhCCHHH
Confidence 9964455 5555555543 222222222221 1234666666666654 2221 112
Q ss_pred -------HHHHHHHHHHHHHHhHhhcccccccC
Q psy7103 339 -------AQEAIRNLILMIATLSMCGYVELRPN 364 (467)
Q Consensus 339 -------~~~~l~~Ll~li~sLt~cG~~ELk~~ 364 (467)
..+.+++.+..+.....-|.+|+|+.
T Consensus 324 ~~~L~~~~~~~~~~~l~~~~~~~~~~~~~lk~r 356 (503)
T PF10508_consen 324 KQLLLQKQGPAMKHVLKAIGDAIKSGSTELKLR 356 (503)
T ss_pred HHHHHhhcchHHHHHHHHHHHHhcCCchHHHHH
Confidence 23345666777777777777777765
No 16
>cd00020 ARM Armadillo/beta-catenin-like repeats. An approximately 40 amino acid long tandemly repeated sequence motif first identified in the Drosophila segment polarity gene armadillo; these repeats were also found in the mammalian armadillo homolog beta-catenin, the junctional plaque protein plakoglobin, the adenomatous polyposis coli (APC) tumor suppressor protein, and a number of other proteins. ARM has been implicated in mediating protein-protein interactions, but no common features among the target proteins recognized by the ARM repeats have been identified; related to the HEAT domain; three consecutive copies of the repeat are represented by this alignment model.
Probab=43.82 E-value=1.7e+02 Score=23.64 Aligned_cols=81 Identities=22% Similarity=0.148 Sum_probs=54.1
Q ss_pred ccchhHHHHHHHHHHhhcCCChhhHHHHhhhcHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHhhhchhhhHHHHHHHH
Q psy7103 237 NVIWRKSAAEILMSLSSQALTPKVVQYVHDKGCIALCIENMTRRKGQDLTPLEIVEMFVSVFCFLKDSSEVSQILLKDFK 316 (467)
Q Consensus 237 n~~WR~~a~~vL~~iS~~~lt~~vi~YI~~k~cI~~~l~nl~~~~~~~~s~~e~ve~~~~v~~fLkdS~~~S~~LlddF~ 316 (467)
+..-|+.+...|..++.+ ++...+++.+.+++..+++-|... + ..+.+.+...++-+-...+ .-.+.+.
T Consensus 20 ~~~~~~~a~~~l~~l~~~--~~~~~~~~~~~~~i~~l~~~l~~~--~----~~v~~~a~~~L~~l~~~~~---~~~~~~~ 88 (120)
T cd00020 20 DENVQREAAWALSNLSAG--NNDNIQAVVEAGGLPALVQLLKSE--D----EEVVKAALWALRNLAAGPE---DNKLIVL 88 (120)
T ss_pred CHHHHHHHHHHHHHHhcC--CHHHHHHHHHCCChHHHHHHHhCC--C----HHHHHHHHHHHHHHccCcH---HHHHHHH
Confidence 356788888999999843 578888888899999999988764 2 4555555555555543332 3444455
Q ss_pred hccChHHHHHHH
Q psy7103 317 EAHGYTFLKNFL 328 (467)
Q Consensus 317 ~~~GY~fL~~fl 328 (467)
+.++=..|.+++
T Consensus 89 ~~g~l~~l~~~l 100 (120)
T cd00020 89 EAGGVPKLVNLL 100 (120)
T ss_pred HCCChHHHHHHH
Confidence 555555555554
No 17
>PF04499 SAPS: SIT4 phosphatase-associated protein; InterPro: IPR007587 The SAPS family consists of proteins that associate with the SIT4 phosphatase protein []. This association is required for SIT4's role in G1 cyclin transcription and for bud formation in yeast.
Probab=42.40 E-value=1.2e+02 Score=33.32 Aligned_cols=78 Identities=14% Similarity=0.252 Sum_probs=55.9
Q ss_pred CchhHHHHHHhCCCCCCccchhHHHHHHHHHH---hhcCCC--------hhhHHHHhhhcHHHHHHHHHhhcCCCCCChH
Q psy7103 220 DDLTLLFSAITSLCPPYNVIWRKSAAEILMSL---SSQALT--------PKVVQYVHDKGCIALCIENMTRRKGQDLTPL 288 (467)
Q Consensus 220 DdLqlLF~~~ts~cp~~n~~WR~~a~~vL~~i---S~~~lt--------~~vi~YI~~k~cI~~~l~nl~~~~~~~~s~~ 288 (467)
+=++.|+..+. |.+....+..|+++|.+| |++... .+.+..|-+..||+.++++|...++ . .
T Consensus 62 ~LI~~Li~~L~---p~~~~~~q~naa~~L~aII~is~n~~~~~~~~igpn~L~r~L~S~~~v~~Ll~~mL~~~~-~---s 134 (475)
T PF04499_consen 62 NLIPRLIDLLS---PSYSSDVQSNAADFLKAIIRISRNAPQNEQSSIGPNPLTRQLVSEETVEKLLDIMLNSQG-G---S 134 (475)
T ss_pred CHHHHHHHHhC---CCCCHHHHHHHHHHHHHHHHHhhccccccccCCCccHHHHHHhChHHHHHHHHHHhcCCC-c---c
Confidence 33344444443 888899999999999998 554432 5788999999999999999997423 2 3
Q ss_pred HHHHHHHHHHHHhhhc
Q psy7103 289 EIVEMFVSVFCFLKDS 304 (467)
Q Consensus 289 e~ve~~~~v~~fLkdS 304 (467)
-++..+..++.+|+..
T Consensus 135 ~lvn~v~IlieLIRkn 150 (475)
T PF04499_consen 135 SLVNGVSILIELIRKN 150 (475)
T ss_pred hHHHHHHHHHHHHHhc
Confidence 4555666666677654
No 18
>PF14664 RICTOR_N: Rapamycin-insensitive companion of mTOR, N-term
Probab=32.92 E-value=6.3e+02 Score=26.90 Aligned_cols=83 Identities=16% Similarity=0.109 Sum_probs=52.8
Q ss_pred HHHHHHHHHHHHhcCCcccccccccCchhHHHHHHhCC---C--CCCc-cchhHHHHHHHHHH-hhcCCChhhHHHHhhh
Q psy7103 195 LQKIFVQLLVRLCSHSAPAEELSNKDDLTLLFSAITSL---C--PPYN-VIWRKSAAEILMSL-SSQALTPKVVQYVHDK 267 (467)
Q Consensus 195 ~q~~~vqiL~~Lc~~~~~~EeL~~~DdLqlLF~~~ts~---c--p~~n-~~WR~~a~~vL~~i-S~~~lt~~vi~YI~~k 267 (467)
+.+.++..++.|..+|..=.=+..+-||..||+..|.. . +.++ -.|+..+.-|...+ |=+| -..=..++.
T Consensus 163 ~~~~l~~~lL~lLd~p~tR~yl~~~~dL~~l~apftd~~~~~~~~~~~~~~l~~s~~ai~~~LrsW~G---Ll~l~~~~~ 239 (371)
T PF14664_consen 163 ISESLLDTLLYLLDSPRTRKYLRPGFDLESLLAPFTDFHYRKIKDDRELERLQASAKAISTLLRSWPG---LLYLSMNDF 239 (371)
T ss_pred HHHHHHHHHHHHhCCcchhhhhcCCccHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHhcCCc---eeeeecCCc
Confidence 34556777777777777766677778899999988765 2 2222 26777776666666 3233 222222344
Q ss_pred cHHHHHHHHHhhc
Q psy7103 268 GCIALCIENMTRR 280 (467)
Q Consensus 268 ~cI~~~l~nl~~~ 280 (467)
+.++-+|+++..-
T Consensus 240 ~~lksLv~~L~~p 252 (371)
T PF14664_consen 240 RGLKSLVDSLRLP 252 (371)
T ss_pred hHHHHHHHHHcCC
Confidence 7788888888663
No 19
>KOG4199|consensus
Probab=30.43 E-value=1.4e+02 Score=32.17 Aligned_cols=121 Identities=16% Similarity=0.137 Sum_probs=84.7
Q ss_pred HHHHHHhcCCcccccccccCchhHHHHHHhCCCCCCccchhHHHHHHHHHHhhcCCChhhHHHHhhhcHHHHHHHHHhhc
Q psy7103 201 QLLVRLCSHSAPAEELSNKDDLTLLFSAITSLCPPYNVIWRKSAAEILMSLSSQALTPKVVQYVHDKGCIALCIENMTRR 280 (467)
Q Consensus 201 qiL~~Lc~~~~~~EeL~~~DdLqlLF~~~ts~cp~~n~~WR~~a~~vL~~iS~~~lt~~vi~YI~~k~cI~~~l~nl~~~ 280 (467)
-.|++|+=.-.-..+.++.--|..||..+.+.=.+-|...-|.+-+.|++|+- +.++-+.|=.||-....++-+.+.
T Consensus 264 ~tl~~lAVr~E~C~~I~e~GGl~tl~~~i~d~n~~~~r~l~k~~lslLralAG---~DsvKs~IV~~gg~~~ii~l~~~h 340 (461)
T KOG4199|consen 264 TTLKALAVRDEICKSIAESGGLDTLLRCIDDSNEQGNRTLAKTCLSLLRALAG---SDSVKSTIVEKGGLDKIITLALRH 340 (461)
T ss_pred HHHHHHHHHHHHHHHHHHccCHHHHHHHHhhhchhhHHHHHHHHHHHHHHHhC---CCchHHHHHHhcChHHHHHHHHHc
Confidence 35566666666667777888888899888765577777777888888888873 458888899999999999988885
Q ss_pred CCCCCChHHHHHHHHHHHHHhhhchhhhHHHHHHHHhccChHHHHHHHHhh
Q psy7103 281 KGQDLTPLEIVEMFVSVFCFLKDSSEVSQILLKDFKEAHGYTFLKNFLINL 331 (467)
Q Consensus 281 ~~~~~s~~e~ve~~~~v~~fLkdS~~~S~~LlddF~~~~GY~fL~~flLr~ 331 (467)
. ++ +-+++-+.+++|||--=++--++-. -.+.|-.+.++-+.+.
T Consensus 341 ~-~~---p~Vi~~~~a~i~~l~LR~pdhsa~~---ie~G~a~~avqAmkah 384 (461)
T KOG4199|consen 341 S-DD---PLVIQEVMAIISILCLRSPDHSAKA---IEAGAADLAVQAMKAH 384 (461)
T ss_pred C-CC---hHHHHHHHHHHHHHHhcCcchHHHH---HhcchHHHHHHHHHhC
Confidence 1 44 6677777777888865555333222 1244556666666554
No 20
>PF07159 DUF1394: Protein of unknown function (DUF1394); InterPro: IPR009828 This family consists of several hypothetical eukaryotic proteins of around 320 residues in length. The function of this family is unknown.
Probab=29.48 E-value=3.5e+02 Score=28.38 Aligned_cols=35 Identities=40% Similarity=0.638 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHHHhcCCc-ccccccccCchhHHHHH
Q psy7103 194 LLQKIFVQLLVRLCSHSA-PAEELSNKDDLTLLFSA 228 (467)
Q Consensus 194 ~~q~~~vqiL~~Lc~~~~-~~EeL~~~DdLqlLF~~ 228 (467)
.+++.|..+|.+||+.|. +.+.|.+.+.|..-|.-
T Consensus 83 ~le~~~~~ll~~L~~~~~~~~~~l~~~qAL~kq~a~ 118 (303)
T PF07159_consen 83 ELEKVFPKLLKELCSGPLKPKEHLEQKQALAKQFAE 118 (303)
T ss_pred HHHHHHHHHHHHHhCCCCCchhhhHHhHHHHHHHHH
Confidence 446889999999998876 46888887777554443
No 21
>PF06371 Drf_GBD: Diaphanous GTPase-binding Domain; InterPro: IPR010473 Diaphanous-related formins (Drfs) are a family of formin homology (FH) proteins that act as effectors of Rho small GTPases during growth factor-induced cytoskeletal remodelling, stress fibre formation, and cell division []. Drf proteins are characterised by a variety of shared domains: an N-terminal GTPase-binding domain (GBD), formin-homology domains FH1, FH2 (IPR003104 from INTERPRO) and FH3 (IPR010472 from INTERPRO), and a C-terminal conserved Dia-autoregulatory domain (DAD) that binds the GBD. This entry represents the GBD, which is a bifunctional autoinhibitory domain that interacts with and is regulated by activated Rho family members. Mammalian Drf3 contains a CRIB-like motif within its GBD for binding to Cdc42, which is required for Cdc42 to activate and guide Drf3 towards the cell cortex where it remodels the actin skeleton [].; GO: 0003779 actin binding, 0017048 Rho GTPase binding, 0030036 actin cytoskeleton organization; PDB: 3OBV_A 2BNX_A 3EG5_D 2BAP_B 3O4X_B 1Z2C_B 2F31_A.
Probab=29.14 E-value=1.6e+02 Score=26.93 Aligned_cols=103 Identities=22% Similarity=0.207 Sum_probs=69.5
Q ss_pred hHHHHHHH-HhcCChhHHHHHHhcCChhHHHHHHHHhhcCCCCChhhhhccCCCCCCchhHHHHHHHHHHHHHHHHHhcC
Q psy7103 131 MLLSTLNL-LAAGDVSLVEVMTKASLPSTLVKCLYLFFDLPQMNEEEANITDVNSDFTPRERRILLQKIFVQLLVRLCSH 209 (467)
Q Consensus 131 ~LL~sl~l-Ls~~~~~~v~~m~~agLPStLVkcLYLffdlP~~~~~~~~~~~~~s~~~~~e~r~~~q~~~vqiL~~Lc~~ 209 (467)
-.|++|++ |-+.+.+-++.-++.|=...|+++|..+-.-+... +....++...++-+..|+.+
T Consensus 83 ~~L~~L~v~Lrt~~~~Wv~~Fl~~~G~~~L~~~L~~~~~~~~~~----------------~~~~~~~~~~l~Clkal~n~ 146 (187)
T PF06371_consen 83 KILKSLRVSLRTNPISWVQEFLELGGLEALLNVLSKLNKKKEKS----------------EEDIDIEHECLRCLKALMNT 146 (187)
T ss_dssp HHHHHHHHHHHHS-HHHHHHH-HHHHHHHHHHHHHHHHTHHCTC----------------TTCHHHHHHHHHHHHHHTSS
T ss_pred HHHHHHHHHhccCCchHHHHhccCCCHHHHHHHHHHhhhhhhhc----------------chhHHHHHHHHHHHHHHHcc
Confidence 67777774 44444455666666666677888887764221111 23456678889999999999
Q ss_pred CcccccccccCchhHHHHHHhCCCCCCccchhHHHHHHHHHHh
Q psy7103 210 SAPAEELSNKDDLTLLFSAITSLCPPYNVIWRKSAAEILMSLS 252 (467)
Q Consensus 210 ~~~~EeL~~~DdLqlLF~~~ts~cp~~n~~WR~~a~~vL~~iS 252 (467)
+.+.+.+++.++.-..+... . ...++.=|+.|.++|.++.
T Consensus 147 ~~G~~~v~~~~~~v~~i~~~--L-~s~~~~~r~~~leiL~~lc 186 (187)
T PF06371_consen 147 KYGLEAVLSHPDSVNLIALS--L-DSPNIKTRKLALEILAALC 186 (187)
T ss_dssp HHHHHHHHCSSSHHHHHHHT-----TTSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCcHHHHHHHHH--H-CCCCHHHHHHHHHHHHHHH
Confidence 99999999977765443333 2 3466788999999998874
No 22
>KOG4822|consensus
Probab=27.94 E-value=1.2e+03 Score=29.54 Aligned_cols=91 Identities=13% Similarity=0.159 Sum_probs=45.8
Q ss_pred hhhhhhhhHHHHHHHHHHHHHHHhcc--CChHHHHHHHHHHhhHhcCCCCchhhhHHHHH---HHHhcCChhHHHHHHhc
Q psy7103 79 KFRDVHQFCDHVSRLMVTKVCQRASN--QSTEIASCAIAKFLEIENSEESSSGWMLLSTL---NLLAAGDVSLVEVMTKA 153 (467)
Q Consensus 79 ~F~~~~~Fa~~vsr~lV~eI~k~~~~--q~~e~A~~aI~~fl~~~~~e~~s~G~~LL~sl---~lLs~~~~~~v~~m~~a 153 (467)
+|.-++.|+-.=-....+-|+++-+. |+--....+......++.+.-.-+--.+|+.+ ++|... ...-+.
T Consensus 1037 ~~~a~qL~sA~giq~cIr~i~~Lc~~~~qp~~~h~~~l~t~~~v~~c~l~~ptl~~l~~~L~~~ll~~~-----g~fKDl 1111 (1906)
T KOG4822|consen 1037 CYDATQLVSASGIQWCIRSISLLCDSQVQPLCFHKKELLTSLSVKDCALIFPTLLKLCQVLPVELLSCL-----GAFKDL 1111 (1906)
T ss_pred HHHHHhhhhcchHHHHHHHHHHHHHhhcCchhhhhhhHhhhhcceehhhHhhHHHHHHHHHHHHHHhcc-----cccccc
Confidence 33344444433334444555555333 44444444444444332222222222333322 222222 223456
Q ss_pred CChhHHHHHHHHhhcCCCCCh
Q psy7103 154 SLPSTLVKCLYLFFDLPQMNE 174 (467)
Q Consensus 154 gLPStLVkcLYLffdlP~~~~ 174 (467)
+.|+.||+.+|++|..|...+
T Consensus 1112 s~~d~LVsl~~lL~s~p~~c~ 1132 (1906)
T KOG4822|consen 1112 SGQDGLVSLLFLLFSSPRWCD 1132 (1906)
T ss_pred ccchhHHHHHHHHhccccccc
Confidence 789999999999999997665
No 23
>PF14726 RTTN_N: Rotatin, an armadillo repeat protein, centriole functioning
Probab=26.48 E-value=1e+02 Score=27.03 Aligned_cols=71 Identities=23% Similarity=0.305 Sum_probs=48.2
Q ss_pred ChhHHHHHHHHhhcCCCCChhhhhccCCCCCCchhHHHHHHHHHHHHHHHHHhcCCcccccccccCchhHHHHHHhCCCC
Q psy7103 155 LPSTLVKCLYLFFDLPQMNEEEANITDVNSDFTPRERRILLQKIFVQLLVRLCSHSAPAEELSNKDDLTLLFSAITSLCP 234 (467)
Q Consensus 155 LPStLVkcLYLffdlP~~~~~~~~~~~~~s~~~~~e~r~~~q~~~vqiL~~Lc~~~~~~EeL~~~DdLqlLF~~~ts~cp 234 (467)
=|..|+|-|--.|-.|+.+.. +-+.-+|.+|.+||.|++-|.+--.... ++=+ -+
T Consensus 27 ~~~~Ll~~LleWFnf~~~~~~---------------------~~VL~Ll~~L~~~~~a~~~l~~iG~~~f-L~kl---r~ 81 (98)
T PF14726_consen 27 KERLLLKQLLEWFNFPPVPMK---------------------EEVLALLLRLLKSPYAAQILRDIGAVRF-LSKL---RP 81 (98)
T ss_pred cHHHHHHHHHHHhCCCCCccH---------------------HHHHHHHHHHHhCcHHHHHHHHccHHHH-HHHH---Hh
Confidence 356788888888888776652 3377899999999999998877655554 2222 24
Q ss_pred CCccchhHHHHHHHHH
Q psy7103 235 PYNVIWRKSAAEILMS 250 (467)
Q Consensus 235 ~~n~~WR~~a~~vL~~ 250 (467)
.-...|+.....++..
T Consensus 82 ~~~~~~~~~id~il~~ 97 (98)
T PF14726_consen 82 NVEPNLQAEIDEILDQ 97 (98)
T ss_pred cCCHHHHHHHHHHHhc
Confidence 4455566666666543
No 24
>PF08045 CDC14: Cell division control protein 14, SIN component; InterPro: IPR012535 Cdc14 is a component of the septation initiation network (SIN) and is required for the localisation and activity of Sid1. Sid1 is a protein kinase that localises asymmetrically to one spindle pole body (SPB) in anaphase disappears prior to cell separation [], [].
Probab=23.14 E-value=4.4e+02 Score=26.99 Aligned_cols=78 Identities=23% Similarity=0.362 Sum_probs=60.0
Q ss_pred HHHHHHHHHhhcCCChhhHHHHhhhcHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHhhhchhhhHHHHHHHHhccChH
Q psy7103 243 SAAEILMSLSSQALTPKVVQYVHDKGCIALCIENMTRRKGQDLTPLEIVEMFVSVFCFLKDSSEVSQILLKDFKEAHGYT 322 (467)
Q Consensus 243 ~a~~vL~~iS~~~lt~~vi~YI~~k~cI~~~l~nl~~~~~~~~s~~e~ve~~~~v~~fLkdS~~~S~~LlddF~~~~GY~ 322 (467)
.|.+||.-+. =+.|+.-.+-|.++=++++|.=+.. ..++...+..+.+++|.+.|+++- ..+|+..+|-.
T Consensus 110 ~aL~vLQGl~--LLHp~Sr~lF~r~~~m~lll~LL~~----~~~~~i~~a~L~tLv~iLld~p~N----~r~FE~~~Gl~ 179 (257)
T PF08045_consen 110 LALRVLQGLC--LLHPPSRKLFHREQNMELLLDLLSP----SNPPAIQSACLDTLVCILLDSPEN----QRDFEELNGLS 179 (257)
T ss_pred HHHHHHHHHH--HcCchHHHHHhhhhhHHHHHHHhcc----CCCchHHHHHHHHHHHHHHcChHH----HHHHHHhCCHH
Confidence 3556666665 3677888888888888888877733 345688899999999999998764 34899999999
Q ss_pred HHHHHHHh
Q psy7103 323 FLKNFLIN 330 (467)
Q Consensus 323 fL~~flLr 330 (467)
.+...+..
T Consensus 180 ~v~~llk~ 187 (257)
T PF08045_consen 180 TVCSLLKS 187 (257)
T ss_pred HHHHHHcc
Confidence 88886643
No 25
>PF05536 Neurochondrin: Neurochondrin
Probab=23.03 E-value=3.2e+02 Score=30.59 Aligned_cols=102 Identities=19% Similarity=0.176 Sum_probs=66.8
Q ss_pred HHHHHHHHHHHHHhcCCcccccccccCchhHHHHHHhCCCCCCccchhHHHHHHHHHHhhcCCChhhHHHHhhhcHHHHH
Q psy7103 194 LLQKIFVQLLVRLCSHSAPAEELSNKDDLTLLFSAITSLCPPYNVIWRKSAAEILMSLSSQALTPKVVQYVHDKGCIALC 273 (467)
Q Consensus 194 ~~q~~~vqiL~~Lc~~~~~~EeL~~~DdLqlLF~~~ts~cp~~n~~WR~~a~~vL~~iS~~~lt~~vi~YI~~k~cI~~~ 273 (467)
.+-+--.|+|..++++|.+.+.|++.+++..|+..+.+ +..=+..|..+|..+... .....++ -....+...
T Consensus 114 ~~v~dalqcL~~Ias~~~G~~aLl~~g~v~~L~ei~~~-----~~~~~E~Al~lL~~Lls~-~~~~~~~--~~~~~l~~i 185 (543)
T PF05536_consen 114 ETVDDALQCLLAIASSPEGAKALLESGAVPALCEIIPN-----QSFQMEIALNLLLNLLSR-LGQKSWA--EDSQLLHSI 185 (543)
T ss_pred hHHHHHHHHHHHHHcCcHhHHHHHhcCCHHHHHHHHHh-----CcchHHHHHHHHHHHHHh-cchhhhh--hhHHHHHHH
Confidence 34455679999999999999999999999999999976 333467888888888532 2222322 112233334
Q ss_pred HHHHhhcCCCCCChHHHHHHHHHHHHHhhhc
Q psy7103 274 IENMTRRKGQDLTPLEIVEMFVSVFCFLKDS 304 (467)
Q Consensus 274 l~nl~~~~~~~~s~~e~ve~~~~v~~fLkdS 304 (467)
+..|.+. -.......-++.+..+-.||.-+
T Consensus 186 l~~La~~-fs~~~~~~kfell~~L~~~L~~~ 215 (543)
T PF05536_consen 186 LPSLARD-FSSFHGEDKFELLEFLSAFLPRS 215 (543)
T ss_pred HHHHHHH-HHhhccchHHHHHHHHHHhcCcC
Confidence 5556661 01112245677777777777766
No 26
>KOG2005|consensus
Probab=22.27 E-value=1.3e+03 Score=27.23 Aligned_cols=145 Identities=17% Similarity=0.237 Sum_probs=86.3
Q ss_pred hhhhhHHHHHHHHHHHHHHHhccCChHHH--------HHHHHHH-hhHhcCCCCchhhhHHHHHHHHhcCChhHHHHHHh
Q psy7103 82 DVHQFCDHVSRLMVTKVCQRASNQSTEIA--------SCAIAKF-LEIENSEESSSGWMLLSTLNLLAAGDVSLVEVMTK 152 (467)
Q Consensus 82 ~~~~Fa~~vsr~lV~eI~k~~~~q~~e~A--------~~aI~~f-l~~~~~e~~s~G~~LL~sl~lLs~~~~~~v~~m~~ 152 (467)
|+..+-..--|.++-||-+--.++..|.+ ...|+.| +.+ +.|.+ --.||--|+ +.|++-.-++
T Consensus 144 d~~~WGHeYVRhLageIaee~~~~~~e~~~~~dl~~l~~~iV~f~mkH-NAE~e--AiDlL~Eve-----~id~l~~~Vd 215 (878)
T KOG2005|consen 144 DLGSWGHEYVRHLAGEIAEEYNNREMEAPSKADLLDLVQEIVPFHMKH-NAEFE--AIDLLMEVE-----GIDLLLDYVD 215 (878)
T ss_pred ChhhhHHHHHHHHHHHHHHHHhhccccccchHHHHHHHHHHHHHHHhc-cchhH--HHHHHHHhh-----hHhHHHHHhh
Confidence 45566667778888888777666444444 3567777 544 33433 223332222 1121111111
Q ss_pred cCChhHHHHHHHHhhcCCCCChhhhhccCCCCCCchhHHHHHHHHHHHHHHHHHhcCCcccccccccCchhHHHHHHhCC
Q psy7103 153 ASLPSTLVKCLYLFFDLPQMNEEEANITDVNSDFTPRERRILLQKIFVQLLVRLCSHSAPAEELSNKDDLTLLFSAITSL 232 (467)
Q Consensus 153 agLPStLVkcLYLffdlP~~~~~~~~~~~~~s~~~~~e~r~~~q~~~vqiL~~Lc~~~~~~EeL~~~DdLqlLF~~~ts~ 232 (467)
-- --=--|||+-=+.|..|.++ +..+.+...+|-.+..+||.++.-.++-|+.+..-.-.+|-
T Consensus 216 ~~--n~~RvclYl~sc~~~lP~Pd---------------d~~ll~~a~~IYlKf~~~~~al~~ai~l~~~~~v~~vf~s~ 278 (878)
T KOG2005|consen 216 EH--NYQRVCLYLTSCVPLLPGPD---------------DVALLRTALKIYLKFNEYPRALVGAIRLDDMKEVKEVFTSC 278 (878)
T ss_pred hh--hHHHHHHHHHHHhhcCCCch---------------hhHHHHHHHHHHHHHHHhHHHHHHHHhcCcHHHHHHHHHhc
Confidence 10 00123999998887776654 45666777889999999999999999999998887777653
Q ss_pred CCCCccchhHHHHHHHHHHhhcCCC
Q psy7103 233 CPPYNVIWRKSAAEILMSLSSQALT 257 (467)
Q Consensus 233 cp~~n~~WR~~a~~vL~~iS~~~lt 257 (467)
+-+-.||+..=+ |+||+++
T Consensus 279 ---~D~~~kKQ~~ym---LaR~~i~ 297 (878)
T KOG2005|consen 279 ---TDPLLKKQMAYM---LARHGIY 297 (878)
T ss_pred ---cCHHHHHHHHHH---HHhcCCc
Confidence 333445544433 4555543
No 27
>COG1563 Predicted subunit of the Multisubunit Na+/H+ antiporter [Inorganic ion transport and metabolism]
Probab=21.78 E-value=1.1e+02 Score=26.47 Aligned_cols=42 Identities=24% Similarity=0.343 Sum_probs=33.5
Q ss_pred hHHHHHHHHhcCChhHHHHHHhcCChhHHHHHHHHhhcCCCCCh
Q psy7103 131 MLLSTLNLLAAGDVSLVEVMTKASLPSTLVKCLYLFFDLPQMNE 174 (467)
Q Consensus 131 ~LL~sl~lLs~~~~~~v~~m~~agLPStLVkcLYLffdlP~~~~ 174 (467)
++|-|+..+.+.|. .++.+.+|.+|.+.-.+|.+++-|.-.-
T Consensus 19 l~l~a~~~i~qrdl--l~AvI~~~~lsll~ally~ll~APDVAl 60 (87)
T COG1563 19 LLLSALLAIFQRDL--LNAVIASGVLSLLAALLYTLLLAPDVAL 60 (87)
T ss_pred HHHHHHHHHHhhhH--HHHHHHHhHHHHHHHHHHHHhcCChHHH
Confidence 45667777777655 6899999999999999999998776554
No 28
>PF10350 DUF2428: Putative death-receptor fusion protein (DUF2428); InterPro: IPR019442 This domain is found in a family of proteins of unknown function that are conserved from plants to humans. Several of these proteins have been annotated as being HEAT repeat-containing proteins while others are designated as death-receptor interacting proteins, but neither of these has yet been confirmed. Aberrations in the genes encoding these proteins have been observed in benign thyroid adenomas [].
Probab=21.18 E-value=2.2e+02 Score=28.40 Aligned_cols=66 Identities=18% Similarity=0.295 Sum_probs=47.5
Q ss_pred HHHHHHHHHHHHHhcCCcccccccccCchhHHHHHHhCCCCCCccchhHHHHHHHHHH-hhcCCChhhHHHHhhhcHHHH
Q psy7103 194 LLQKIFVQLLVRLCSHSAPAEELSNKDDLTLLFSAITSLCPPYNVIWRKSAAEILMSL-SSQALTPKVVQYVHDKGCIAL 272 (467)
Q Consensus 194 ~~q~~~vqiL~~Lc~~~~~~EeL~~~DdLqlLF~~~ts~cp~~n~~WR~~a~~vL~~i-S~~~lt~~vi~YI~~k~cI~~ 272 (467)
.+....+.-|+++|+.|....+--+.| ..+-||.-||+.| .+..++..+.+|+- ..+.+
T Consensus 185 ~ll~~~~~~Ll~ia~~~~~~~~~~~~d------------------~~qVHAlNiLr~if~ds~L~~~~~~yi~--~~l~l 244 (255)
T PF10350_consen 185 PLLHRTMKSLLEIAKSPSTQHEDEKSD------------------LPQVHALNILRAIFRDSKLSEDVSPYIE--DALIL 244 (255)
T ss_pred hHHHHHHHHHHHHhcCCcccccccccc------------------hHHHHHHHHHHHHHhcchhHHHHHHHHH--HHHHH
Confidence 455666677888888887743332222 5678999999999 55678999999987 44677
Q ss_pred HHHHHhh
Q psy7103 273 CIENMTR 279 (467)
Q Consensus 273 ~l~nl~~ 279 (467)
+++++..
T Consensus 245 ai~~f~s 251 (255)
T PF10350_consen 245 AIKGFSS 251 (255)
T ss_pred HHHhCCC
Confidence 7777653
Done!