Query psy7103
Match_columns 467
No_of_seqs 99 out of 112
Neff 4.7
Searched_HMMs 29240
Date Fri Aug 16 18:15:45 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7103.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/7103hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3p8c_A Cytoplasmic FMR1-intera 99.8 5.4E-22 1.8E-26 224.7 6.5 68 400-467 795-862 (1253)
2 4hxt_A De novo protein OR329; 96.3 0.26 8.9E-06 44.0 17.4 184 130-360 62-246 (252)
3 4db6_A Armadillo repeat protei 96.2 0.061 2.1E-06 47.5 12.4 179 108-329 11-190 (210)
4 4hxt_A De novo protein OR329; 95.4 0.31 1E-05 43.5 13.8 178 130-354 20-198 (252)
5 4db8_A Armadillo-repeat protei 95.4 0.71 2.4E-05 41.6 16.3 158 131-328 73-231 (252)
6 1xqr_A HSPBP1 protein; armadil 94.7 2.2 7.4E-05 41.8 18.6 150 133-321 103-254 (296)
7 3tpo_A Importin subunit alpha- 94.4 2.3 8E-05 43.8 19.0 226 54-326 246-475 (529)
8 4db8_A Armadillo-repeat protei 94.1 0.66 2.3E-05 41.9 12.4 164 144-354 44-208 (252)
9 2jdq_A Importin alpha-1 subuni 94.0 3.4 0.00011 40.2 18.3 162 130-327 252-422 (450)
10 1wa5_B Importin alpha subunit; 94.0 4.4 0.00015 41.2 19.8 182 133-358 278-460 (530)
11 4b8j_A Importin subunit alpha- 93.9 0.96 3.3E-05 45.9 14.7 160 133-327 307-475 (528)
12 4b8j_A Importin subunit alpha- 93.6 1.9 6.4E-05 43.8 16.2 183 132-359 264-447 (528)
13 1wa5_B Importin alpha subunit; 93.5 1.9 6.5E-05 44.0 16.1 161 130-326 317-488 (530)
14 3tpo_A Importin subunit alpha- 93.0 2.7 9.2E-05 43.3 16.5 157 133-328 272-429 (529)
15 2jdq_A Importin alpha-1 subuni 91.3 5.9 0.0002 38.4 15.7 180 134-359 214-394 (450)
16 3ul1_B Importin subunit alpha- 90.9 1.6 5.6E-05 44.9 11.9 122 194-326 331-456 (510)
17 3ul1_B Importin subunit alpha- 90.2 3.9 0.00013 42.1 13.9 180 132-357 252-432 (510)
18 1jdh_A Beta-catenin; beta-cate 90.1 16 0.00054 36.3 20.6 177 131-354 162-338 (529)
19 2z6h_A Catenin beta-1, beta-ca 89.9 4.1 0.00014 42.9 14.1 156 134-331 162-317 (644)
20 3nmz_A APC variant protein; pr 89.3 2.2 7.6E-05 44.4 11.4 183 132-347 263-449 (458)
21 3now_A UNC-45 protein, SD10334 89.1 4.6 0.00016 45.2 14.3 189 131-365 600-790 (810)
22 3nmw_A APC variant protein; AR 88.8 3.2 0.00011 41.6 11.7 165 131-328 146-314 (354)
23 1xqr_A HSPBP1 protein; armadil 88.8 4.9 0.00017 39.2 12.8 137 199-356 60-197 (296)
24 1jdh_A Beta-catenin; beta-cate 88.6 21 0.0007 35.5 20.9 179 110-328 186-364 (529)
25 1xm9_A Plakophilin 1; armadill 88.0 15 0.00051 37.2 16.3 122 130-279 62-196 (457)
26 2z6h_A Catenin beta-1, beta-ca 87.6 30 0.001 36.3 19.4 174 134-355 79-253 (644)
27 2z6g_A B-catenin; FULL-length, 86.9 27 0.00092 38.1 18.5 158 131-330 295-452 (780)
28 4db6_A Armadillo repeat protei 86.1 16 0.00056 31.6 18.9 131 131-298 73-204 (210)
29 1xm9_A Plakophilin 1; armadill 83.7 33 0.0011 34.6 16.3 163 131-330 21-196 (457)
30 3now_A UNC-45 protein, SD10334 82.9 53 0.0018 36.8 18.7 145 147-329 488-633 (810)
31 2z6g_A B-catenin; FULL-length, 81.4 66 0.0023 35.0 21.0 179 110-328 319-497 (780)
32 3grl_A General vesicular trans 81.3 9.3 0.00032 42.0 11.6 136 192-330 179-322 (651)
33 3nmw_A APC variant protein; AR 56.1 1.6E+02 0.0055 29.1 14.7 167 133-329 53-224 (354)
34 3nmz_A APC variant protein; pr 50.2 2.3E+02 0.0079 29.2 15.4 191 132-355 168-363 (458)
35 3opb_A SWI5-dependent HO expre 39.5 2.3E+02 0.0079 31.7 12.4 143 194-347 621-773 (778)
36 3tt9_A Plakophilin-2; cell adh 38.4 1.8E+02 0.0061 27.3 10.0 146 129-301 69-227 (233)
37 3l6x_A Catenin delta-1; cateni 37.7 4.1E+02 0.014 28.4 14.0 116 199-329 68-184 (584)
38 4gmo_A Putative uncharacterize 36.2 2.7E+02 0.0092 29.8 12.1 129 198-333 53-196 (684)
39 1x9f_B Erythrocruorin, globin 35.1 75 0.0026 27.0 6.3 80 219-305 41-121 (145)
40 2zs0_D Extracellular giant hem 34.0 74 0.0025 27.5 6.1 76 219-303 43-120 (145)
41 2bk9_A CG9734-PA; oxygen trans 33.5 1.2E+02 0.0043 25.8 7.5 107 219-360 35-148 (153)
42 2c0k_A Hemoglobin; oxygen tran 32.0 1.7E+02 0.0058 25.0 8.1 79 219-304 35-121 (151)
43 2zs0_B Extracellular giant hem 31.4 78 0.0027 26.8 5.7 79 219-304 39-118 (142)
44 1x9f_D Globin C, hemoglobin ch 31.2 82 0.0028 26.6 5.8 79 219-304 39-118 (140)
45 1yhu_D Hemoglobin B2 chain; gl 31.0 88 0.003 26.8 6.1 79 219-304 43-123 (149)
46 2zs0_A Extracellular giant hem 29.4 88 0.003 26.5 5.7 80 219-305 39-119 (140)
47 2f31_A Diaphanous protein homo 28.8 3.5E+02 0.012 24.9 15.5 126 192-324 67-204 (233)
48 1yhu_B Giant hemoglobins B cha 28.7 1.3E+02 0.0043 25.4 6.6 79 219-304 41-120 (144)
49 2vyw_A Hemoglobin; trematode, 28.4 1.9E+02 0.0064 24.8 7.7 80 219-304 40-123 (148)
50 3l6x_A Catenin delta-1; cateni 27.7 5.9E+02 0.02 27.2 14.5 191 133-361 69-276 (584)
51 2zs0_C Extracellular giant hem 26.4 1.1E+02 0.0039 26.0 6.0 80 219-305 43-124 (147)
52 1h97_A Globin-3; HET: HEM; 1.1 26.2 2.1E+02 0.0072 24.5 7.6 80 219-304 39-122 (147)
53 3tt9_A Plakophilin-2; cell adh 25.5 4.2E+02 0.014 24.7 11.1 92 201-303 32-124 (233)
54 4b4y_A Neuroglobin; transport 24.8 1.9E+02 0.0066 24.7 7.1 80 218-304 42-127 (154)
55 3pt8_A Hemoglobin II; oxygen c 24.7 3E+02 0.01 23.2 8.3 110 218-361 37-151 (152)
56 1x9f_C Erythrocruorin, globin 21.8 1.4E+02 0.0047 25.7 5.5 80 218-304 46-127 (153)
57 1v2z_A Circadian clock protein 20.1 1.5E+02 0.0051 25.5 5.1 35 310-354 66-100 (111)
No 1
>3p8c_A Cytoplasmic FMR1-interacting protein 1; actin polymerization, protein binding; 2.29A {Homo sapiens}
Probab=99.84 E-value=5.4e-22 Score=224.73 Aligned_cols=68 Identities=75% Similarity=1.316 Sum_probs=67.4
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhCCCchHHHHHhhccccccCCchHHHHHHHHHhhcccccccccCCCC
Q psy7103 400 DSELEGLLAVNRLCHKLLSKLLGLDDYDAMLHEANHNVLAPYGRITLHIFWELNYDFLPNYCYNGATN 467 (467)
Q Consensus 400 ~veL~~l~~~nrL~h~lLs~~l~ld~f~~~l~E~n~~v~s~~gri~~hv~~el~~d~~pn~~~n~~t~ 467 (467)
+|||++++++||+||+|||+|++|||||+|++|||||+++|+||||+||||||+|||+||||||++||
T Consensus 795 iveLe~ll~i~r~tH~LLse~l~Ld~F~~ml~Ean~~vss~~gRIt~hv~~eL~~Df~PNy~yn~~T~ 862 (1253)
T 3p8c_A 795 IVELDGLLEINRMTHKLLSRYLTLDGFDAMFREANHNVSAPYGRITLHVFWELNYDFLPNYCYNGSTN 862 (1253)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSCCCCHHHHHHHHTTCSSSSSCHHHHHHHHHHHHTHHHHEEEETTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHhccCCCCcchhHHHHHHHHHhccccccceecCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999997
No 2
>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene}
Probab=96.32 E-value=0.26 Score=43.98 Aligned_cols=184 Identities=17% Similarity=0.203 Sum_probs=124.0
Q ss_pred hhHHHHHHHHhcCChhHHHHHHhcCChhHHHHHHHHhhcCCCCChhhhhccCCCCCCchhHHHHHHHHHHHHHHHHHh-c
Q psy7103 130 WMLLSTLNLLAAGDVSLVEVMTKASLPSTLVKCLYLFFDLPQMNEEEANITDVNSDFTPRERRILLQKIFVQLLVRLC-S 208 (467)
Q Consensus 130 ~~LL~sl~lLs~~~~~~v~~m~~agLPStLVkcLYLffdlP~~~~~~~~~~~~~s~~~~~e~r~~~q~~~vqiL~~Lc-~ 208 (467)
...+.++.-|+..+.+..+.+.+.|.-..|++.|. .++ ..++......|.+|| .
T Consensus 62 ~~a~~~L~~l~~~~~~~~~~~~~~~~i~~l~~ll~-------~~~------------------~~v~~~a~~~L~~l~~~ 116 (252)
T 4hxt_A 62 KEAARALANIASGPDEAIKAIVDAGGVEVLVKLLT-------STD------------------SEVQKEAARALANIASG 116 (252)
T ss_dssp HHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTT-------CSS------------------HHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHcCChHHHHHHHHCCCHHHHHHHHc-------CCC------------------HHHHHHHHHHHHHHHcC
Confidence 44556677777776666778888888777777764 111 234566788999999 6
Q ss_pred CCcccccccccCchhHHHHHHhCCCCCCccchhHHHHHHHHHHhhcCCChhhHHHHhhhcHHHHHHHHHhhcCCCCCChH
Q psy7103 209 HSAPAEELSNKDDLTLLFSAITSLCPPYNVIWRKSAAEILMSLSSQALTPKVVQYVHDKGCIALCIENMTRRKGQDLTPL 288 (467)
Q Consensus 209 ~~~~~EeL~~~DdLqlLF~~~ts~cp~~n~~WR~~a~~vL~~iS~~~lt~~vi~YI~~k~cI~~~l~nl~~~~~~~~s~~ 288 (467)
.+...+.+++.+-+..|+..+.+ .+..-|+.|..+|..++.+ ++...+.+...|.|..+++-+... + +.
T Consensus 117 ~~~~~~~~~~~~~i~~L~~~l~~----~~~~~~~~a~~~L~~l~~~--~~~~~~~~~~~~~i~~L~~ll~~~--~---~~ 185 (252)
T 4hxt_A 117 PDEAIKAIVDAGGVEVLVKLLTS----TDSEVQKEAARALANIASG--PDEAIKAIVDAGGVEVLVKLLTST--D---SE 185 (252)
T ss_dssp CHHHHHHHHHTTHHHHHHHHTTC----SCHHHHHHHHHHHHHHTTS--CHHHHHHHHHTTHHHHHHHHTTCS--C---HH
T ss_pred CHHHHHHHHHCCCHHHHHHHHcC----CCHHHHHHHHHHHHHHHcC--CHHHHHHHHHCcCHHHHHHHHCCC--C---HH
Confidence 77888888888889999888864 4567899999999999853 567778999999999999888754 2 23
Q ss_pred HHHHHHHHHHHHhhhchhhhHHHHHHHHhccChHHHHHHHHhhccCCChhHHHHHHHHHHHHHHhHhhcccc
Q psy7103 289 EIVEMFVSVFCFLKDSSEVSQILLKDFKEAHGYTFLKNFLINLENDRSSEAQEAIRNLILMIATLSMCGYVE 360 (467)
Q Consensus 289 e~ve~~~~v~~fLkdS~~~S~~LlddF~~~~GY~fL~~flLr~e~~~~~e~~~~l~~Ll~li~sLt~cG~~E 360 (467)
-...++.++..+... ++.....+....|.+.|.+++- + . ..+..++-+..+..|+..+..+
T Consensus 186 v~~~a~~~L~~l~~~----~~~~~~~l~~~~~i~~L~~ll~---~-~---~~~v~~~a~~~L~~l~~~~~~~ 246 (252)
T 4hxt_A 186 VQKEAARALANIASG----PTSAIKAIVDAGGVEVLQKLLT---S-T---DSEVQKEAQRALENIKSGGWLE 246 (252)
T ss_dssp HHHHHHHHHHHHTTS----BHHHHHHHHHTTHHHHHHHGGG---C-S---CHHHHHHHHHHHHHHHHTCBCC
T ss_pred HHHHHHHHHHHHHcC----CHHHHHHHHHCCCHHHHHHHHC---C-C---cHHHHHHHHHHHHHHHcCCCcc
Confidence 333444443333332 3344555566777777777652 1 1 2244556666666666655443
No 3
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A
Probab=96.20 E-value=0.061 Score=47.53 Aligned_cols=179 Identities=15% Similarity=0.103 Sum_probs=120.2
Q ss_pred HHHHHHHHHHhhHhcCCCCchhhhHHHHHHHHhcCChhHHHHHHhcCChhHHHHHHHHhhcCCCCChhhhhccCCCCCCc
Q psy7103 108 EIASCAIAKFLEIENSEESSSGWMLLSTLNLLAAGDVSLVEVMTKASLPSTLVKCLYLFFDLPQMNEEEANITDVNSDFT 187 (467)
Q Consensus 108 e~A~~aI~~fl~~~~~e~~s~G~~LL~sl~lLs~~~~~~v~~m~~agLPStLVkcLYLffdlP~~~~~~~~~~~~~s~~~ 187 (467)
+.....+.+++.. ++ ..-=..-+.+|.-|+.++.+..+.++++|.-..|+++|.- .+
T Consensus 11 ~~~~~~l~~LL~s--~~-~~v~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~lL~~-------~~------------- 67 (210)
T 4db6_A 11 GSELPQMVQQLNS--PD-QQELQSALRKLSQIASGGNEQIQAVIDAGALPALVQLLSS-------PN------------- 67 (210)
T ss_dssp --CHHHHHHHTTC--SC-HHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTC-------SC-------------
T ss_pred cchhHHHHHHhcC--CC-HHHHHHHHHHHHHHHcCCHHHHHHHHHcCCHHHHHHHHcC-------CC-------------
Confidence 3444455555542 11 1113456677777887777777889999988888888731 11
Q ss_pred hhHHHHHHHHHHHHHHHHHhc-CCcccccccccCchhHHHHHHhCCCCCCccchhHHHHHHHHHHhhcCCChhhHHHHhh
Q psy7103 188 PRERRILLQKIFVQLLVRLCS-HSAPAEELSNKDDLTLLFSAITSLCPPYNVIWRKSAAEILMSLSSQALTPKVVQYVHD 266 (467)
Q Consensus 188 ~~e~r~~~q~~~vqiL~~Lc~-~~~~~EeL~~~DdLqlLF~~~ts~cp~~n~~WR~~a~~vL~~iS~~~lt~~vi~YI~~ 266 (467)
..++..-...|.+||. .+...+.+++.+-+..|...+.+ .+...|+.|..+|..++. -++..++.+.+
T Consensus 68 -----~~v~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~lL~~----~~~~v~~~a~~~L~~l~~--~~~~~~~~~~~ 136 (210)
T 4db6_A 68 -----EQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSS----PNEQILQEALWALSNIAS--GGNEQIQAVID 136 (210)
T ss_dssp -----HHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHHHHTTC----SCHHHHHHHHHHHHHHTT--SCHHHHHHHHH
T ss_pred -----HHHHHHHHHHHHHHhcCCcHHHHHHHHCCCHHHHHHHHcC----CcHHHHHHHHHHHHHHHc--CCHHHHHHHHH
Confidence 1345556788999995 56777888888889999998865 367899999999999984 35677888889
Q ss_pred hcHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHhhhchhhhHHHHHHHHhccChHHHHHHHH
Q psy7103 267 KGCIALCIENMTRRKGQDLTPLEIVEMFVSVFCFLKDSSEVSQILLKDFKEAHGYTFLKNFLI 329 (467)
Q Consensus 267 k~cI~~~l~nl~~~~~~~~s~~e~ve~~~~v~~fLkdS~~~S~~LlddF~~~~GY~fL~~flL 329 (467)
.|.|..+++-+++. + +.-...++.++..+...+ +.....+..+.|.+.|.+++.
T Consensus 137 ~~~i~~L~~ll~~~--~---~~v~~~a~~aL~~l~~~~----~~~~~~~~~~g~i~~L~~ll~ 190 (210)
T 4db6_A 137 AGALPALVQLLSSP--N---EQILQEALWALSNIASGG----NEQKQAVKEAGALEKLEQLQS 190 (210)
T ss_dssp TTHHHHHHHHTTCS--C---HHHHHHHHHHHHHHHTSC----HHHHHHHHHTTHHHHHHHGGG
T ss_pred cCcHHHHHHHHcCC--C---HHHHHHHHHHHHHHHcCC----cHHHHHHHHCCCHHHHHHHHh
Confidence 99999999988764 2 233334444444443332 333455666777777777653
No 4
>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene}
Probab=95.43 E-value=0.31 Score=43.52 Aligned_cols=178 Identities=18% Similarity=0.217 Sum_probs=120.6
Q ss_pred hhHHHHHHHHhcCChhHHHHHHhcCChhHHHHHHHHhhcCCCCChhhhhccCCCCCCchhHHHHHHHHHHHHHHHHHhcC
Q psy7103 130 WMLLSTLNLLAAGDVSLVEVMTKASLPSTLVKCLYLFFDLPQMNEEEANITDVNSDFTPRERRILLQKIFVQLLVRLCSH 209 (467)
Q Consensus 130 ~~LL~sl~lLs~~~~~~v~~m~~agLPStLVkcLYLffdlP~~~~~~~~~~~~~s~~~~~e~r~~~q~~~vqiL~~Lc~~ 209 (467)
..-+.++.-|+..+.+..+.++++|.-..|++.|.- .+ ..++......|.+|+.+
T Consensus 20 ~~a~~~L~~l~~~~~~~~~~~~~~g~i~~L~~ll~~-------~~------------------~~v~~~a~~~L~~l~~~ 74 (252)
T 4hxt_A 20 KEAARDLAEIASGPASAIKAIVDAGGVEVLVKLLTS-------TD------------------SEVQKEAARALANIASG 74 (252)
T ss_dssp HHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTC-------SC------------------HHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHhcCCcHHHHHHHHCCCHHHHHHHHhC-------CC------------------HHHHHHHHHHHHHHHcC
Confidence 345566667777777667888899888888887631 11 23456677889999998
Q ss_pred -CcccccccccCchhHHHHHHhCCCCCCccchhHHHHHHHHHHhhcCCChhhHHHHhhhcHHHHHHHHHhhcCCCCCChH
Q psy7103 210 -SAPAEELSNKDDLTLLFSAITSLCPPYNVIWRKSAAEILMSLSSQALTPKVVQYVHDKGCIALCIENMTRRKGQDLTPL 288 (467)
Q Consensus 210 -~~~~EeL~~~DdLqlLF~~~ts~cp~~n~~WR~~a~~vL~~iS~~~lt~~vi~YI~~k~cI~~~l~nl~~~~~~~~s~~ 288 (467)
+...+.+++.+-+..|...+.+ .+...|+.|..+|..++. .++...+.+-..|.|..+++-+++. + .
T Consensus 75 ~~~~~~~~~~~~~i~~l~~ll~~----~~~~v~~~a~~~L~~l~~--~~~~~~~~~~~~~~i~~L~~~l~~~--~----~ 142 (252)
T 4hxt_A 75 PDEAIKAIVDAGGVEVLVKLLTS----TDSEVQKEAARALANIAS--GPDEAIKAIVDAGGVEVLVKLLTST--D----S 142 (252)
T ss_dssp CHHHHHHHHHTTHHHHHHHHTTC----SSHHHHHHHHHHHHHHTT--SCHHHHHHHHHTTHHHHHHHHTTCS--C----H
T ss_pred ChHHHHHHHHCCCHHHHHHHHcC----CCHHHHHHHHHHHHHHHc--CCHHHHHHHHHCCCHHHHHHHHcCC--C----H
Confidence 8888888888899999888864 568899999999999984 3567888888899999999888754 2 3
Q ss_pred HHHHHHHHHHHHhhhchhhhHHHHHHHHhccChHHHHHHHHhhccCCChhHHHHHHHHHHHHHHhH
Q psy7103 289 EIVEMFVSVFCFLKDSSEVSQILLKDFKEAHGYTFLKNFLINLENDRSSEAQEAIRNLILMIATLS 354 (467)
Q Consensus 289 e~ve~~~~v~~fLkdS~~~S~~LlddF~~~~GY~fL~~flLr~e~~~~~e~~~~l~~Ll~li~sLt 354 (467)
++...+...++-+-.. +......+...++.+.|.+++- + . ..+..+..+..+..++
T Consensus 143 ~~~~~a~~~L~~l~~~---~~~~~~~~~~~~~i~~L~~ll~---~-~---~~~v~~~a~~~L~~l~ 198 (252)
T 4hxt_A 143 EVQKEAARALANIASG---PDEAIKAIVDAGGVEVLVKLLT---S-T---DSEVQKEAARALANIA 198 (252)
T ss_dssp HHHHHHHHHHHHHTTS---CHHHHHHHHHTTHHHHHHHHTT---C-S---CHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHcC---CHHHHHHHHHCcCHHHHHHHHC---C-C---CHHHHHHHHHHHHHHH
Confidence 4444444444444332 2233344555777777777763 1 1 1233444555555555
No 5
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct}
Probab=95.41 E-value=0.71 Score=41.65 Aligned_cols=158 Identities=16% Similarity=0.131 Sum_probs=107.7
Q ss_pred hHHHHHHHHhcCChhHHHHHHhcCChhHHHHHHHHhhcCCCCChhhhhccCCCCCCchhHHHHHHHHHHHHHHHHHhcCC
Q psy7103 131 MLLSTLNLLAAGDVSLVEVMTKASLPSTLVKCLYLFFDLPQMNEEEANITDVNSDFTPRERRILLQKIFVQLLVRLCSHS 210 (467)
Q Consensus 131 ~LL~sl~lLs~~~~~~v~~m~~agLPStLVkcLYLffdlP~~~~~~~~~~~~~s~~~~~e~r~~~q~~~vqiL~~Lc~~~ 210 (467)
.-+.+|.-|+.++.+..+.+++.|.-..|++.|.- ++ ..++..-...|.+|+.++
T Consensus 73 ~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~lL~~-------~~------------------~~v~~~a~~~L~~l~~~~ 127 (252)
T 4db8_A 73 EALWALSNIASGGNEQIQAVIDAGALPALVQLLSS-------PN------------------EQILQEALWALSNIASGG 127 (252)
T ss_dssp HHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHGGGC-------SC------------------HHHHHHHHHHHHHHTTSC
T ss_pred HHHHHHHHHhcCCHHHHHHHHHcCCHHHHHHHHcC-------CC------------------HHHHHHHHHHHHHhhcCC
Confidence 44556666777666667788888877777776621 11 234566778899999998
Q ss_pred ccc-ccccccCchhHHHHHHhCCCCCCccchhHHHHHHHHHHhhcCCChhhHHHHhhhcHHHHHHHHHhhcCCCCCChHH
Q psy7103 211 APA-EELSNKDDLTLLFSAITSLCPPYNVIWRKSAAEILMSLSSQALTPKVVQYVHDKGCIALCIENMTRRKGQDLTPLE 289 (467)
Q Consensus 211 ~~~-EeL~~~DdLqlLF~~~ts~cp~~n~~WR~~a~~vL~~iS~~~lt~~vi~YI~~k~cI~~~l~nl~~~~~~~~s~~e 289 (467)
... +.+++.+-+..|...+.+ .+..-|+.|..+|..++.+ ++...+.+-..|.|..+++-++.. + +.-
T Consensus 128 ~~~~~~~~~~~~i~~L~~lL~~----~~~~v~~~a~~~L~~l~~~--~~~~~~~~~~~~~i~~L~~ll~~~--~---~~v 196 (252)
T 4db8_A 128 NEQIQAVIDAGALPALVQLLSS----PNEQILQEALWALSNIASG--GNEQIQAVIDAGALPALVQLLSSP--N---EQI 196 (252)
T ss_dssp HHHHHHHHHTTHHHHHHHGGGC----SCHHHHHHHHHHHHHHTTS--CHHHHHHHHHTTCHHHHHHGGGCS--S---HHH
T ss_pred chHHHHHHHCCCHHHHHHHHhC----CCHHHHHHHHHHHHHHHcC--ChHHHHHHHHCCCHHHHHHHHCCC--C---HHH
Confidence 887 888888899999888865 3667899999999999843 467788888899999999888654 2 233
Q ss_pred HHHHHHHHHHHhhhchhhhHHHHHHHHhccChHHHHHHH
Q psy7103 290 IVEMFVSVFCFLKDSSEVSQILLKDFKEAHGYTFLKNFL 328 (467)
Q Consensus 290 ~ve~~~~v~~fLkdS~~~S~~LlddF~~~~GY~fL~~fl 328 (467)
...++.++-.+...+ +.....+..+.|.+.|.+++
T Consensus 197 ~~~a~~~L~~l~~~~----~~~~~~~~~~g~i~~L~~ll 231 (252)
T 4db8_A 197 LQEALWALSNIASGG----NEQKQAVKEAGALEKLEQLQ 231 (252)
T ss_dssp HHHHHHHHHHHTTSC----HHHHHHHHHTTHHHHHHTTT
T ss_pred HHHHHHHHHHHhcCC----HHHHHHHHHCCcHHHHHHHh
Confidence 334444444444333 33344445566666665554
No 6
>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A*
Probab=94.71 E-value=2.2 Score=41.76 Aligned_cols=150 Identities=11% Similarity=0.065 Sum_probs=104.3
Q ss_pred HHHHHHHhcCChhHHHHHHhcCChhHHHHHHHHhhcCCCCChhhhhccCCCCCCchhHHHHHHHHHHHHHHHHHhcC-Cc
Q psy7103 133 LSTLNLLAAGDVSLVEVMTKASLPSTLVKCLYLFFDLPQMNEEEANITDVNSDFTPRERRILLQKIFVQLLVRLCSH-SA 211 (467)
Q Consensus 133 L~sl~lLs~~~~~~v~~m~~agLPStLVkcLYLffdlP~~~~~~~~~~~~~s~~~~~e~r~~~q~~~vqiL~~Lc~~-~~ 211 (467)
..+|--+++++...-+.+++.|....|+++|.- + ++ ..+.+..+..|..||++ +.
T Consensus 103 a~~Lg~ia~~n~~~~~~vv~~g~l~~Ll~LL~~----~--~~------------------~~v~~~A~~ALsnl~~~~~~ 158 (296)
T 1xqr_A 103 AQLIGTCSQNVAAIQEQVLGLGALRKLLRLLDR----D--AC------------------DTVRVKALFAISCLVREQEA 158 (296)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHH----C--SC------------------HHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHhCCHHHHHHHHHCCCHHHHHHHHcc----C--CC------------------HHHHHHHHHHHHHHHcCCcH
Confidence 344445556666656677888988888888742 0 11 23456677888999985 44
Q ss_pred ccccccccCchhHHHHHHhCCCCCCccchhHHHHHHHHHHhhcCCChhhHHHHhhhcHHHHHHHHHhhcCCCCCChHHHH
Q psy7103 212 PAEELSNKDDLTLLFSAITSLCPPYNVIWRKSAAEILMSLSSQALTPKVVQYVHDKGCIALCIENMTRRKGQDLTPLEIV 291 (467)
Q Consensus 212 ~~EeL~~~DdLqlLF~~~ts~cp~~n~~WR~~a~~vL~~iS~~~lt~~vi~YI~~k~cI~~~l~nl~~~~~~~~s~~e~v 291 (467)
..+..++..-+..|...+.+ .+..-++.|...|..++++ ++..++++.+.|+|+.++.-|... +. ....
T Consensus 159 ~~~~~~~~ggi~~L~~lL~~----~d~~v~~~A~~aLs~L~~~--~~~~~~~vv~~g~i~~Lv~LL~~~--d~---~v~~ 227 (296)
T 1xqr_A 159 GLLQFLRLDGFSVLMRAMQQ----QVQKLKVKSAFLLQNLLVG--HPEHKGTLCSMGMVQQLVALVRTE--HS---PFHE 227 (296)
T ss_dssp HHHHHHHTTHHHHHHHHHHS----SCHHHHHHHHHHHHHHHHH--CGGGHHHHHHTTHHHHHHHHHTSC--CS---THHH
T ss_pred HHHHHHHCCCHHHHHHHHcC----CCHHHHHHHHHHHHHHHhC--ChHHHHHHHHcCCHHHHHHHHcCC--Ch---hHHH
Confidence 56677777889999888875 3677889999999999854 788999999999999999988764 32 3444
Q ss_pred HHHHHHHHHhhhchhhhHHHHHHHHhc-cCh
Q psy7103 292 EMFVSVFCFLKDSSEVSQILLKDFKEA-HGY 321 (467)
Q Consensus 292 e~~~~v~~fLkdS~~~S~~LlddF~~~-~GY 321 (467)
.++.+|..++++ .+....++... .+|
T Consensus 228 ~al~aL~~l~~~----~~~~~~~~~~~~~~l 254 (296)
T 1xqr_A 228 HVLGALCSLVTD----FPQGVRECREPELGL 254 (296)
T ss_dssp HHHHHHHHHHTT----CHHHHHHHHCGGGCH
T ss_pred HHHHHHHHHHhC----ChhHHHHHhccHHHH
Confidence 455555566666 33444555543 345
No 7
>3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B
Probab=94.41 E-value=2.3 Score=43.78 Aligned_cols=226 Identities=12% Similarity=0.147 Sum_probs=132.7
Q ss_pred HHHHhhhhhHHHHHhcCCCchhhHHhhhhhhhhHHHHHHHHHHHHHHHhccCChHHHHHHHHHHhhHhcCCCCchhhhHH
Q psy7103 54 DDKLYNMLPLFCKVFGNSNSADMTDKFRDVHQFCDHVSRLMVTKVCQRASNQSTEIASCAIAKFLEIENSEESSSGWMLL 133 (467)
Q Consensus 54 e~~L~~~LPLFckv~~~~~~~~~v~~F~~~~~Fa~~vsr~lV~eI~k~~~~q~~e~A~~aI~~fl~~~~~e~~s~G~~LL 133 (467)
.......+|...++....++.......+-+..++..- .+..+..... .+...+.+++.. +...-=...+
T Consensus 246 ~~~~~~~lp~L~~LL~~~~~~v~~~a~~aL~~l~~~~-----~~~~~~v~~~---g~i~~Lv~lL~~---~~~~v~~~a~ 314 (529)
T 3tpo_A 246 LDAVEQILPTLVRLLHHNDPEVLADSCWAISYLTDGP-----NERIEMVVKK---GVVPQLVKLLGA---TELPIVTPAL 314 (529)
T ss_dssp HHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHSSC-----HHHHHHHHTT---TCHHHHHHHHTC---SCHHHHHHHH
T ss_pred HHHHhhHHHHHHHHhcCCcHHHHHHHHHHHHHhhhhh-----hhhHHHHHhc---cchHHHHHHhcC---CChhHHHHHH
Confidence 3444556888888877665544333332222221110 0111111111 122334555541 1111123456
Q ss_pred HHHHHHhcCChhHHHHHHhcCChhHHHHHHHHhhcCCCCChhhhhccCCCCCCchhHHHHHHHHHHHHHHHHHhcCC-cc
Q psy7103 134 STLNLLAAGDVSLVEVMTKASLPSTLVKCLYLFFDLPQMNEEEANITDVNSDFTPRERRILLQKIFVQLLVRLCSHS-AP 212 (467)
Q Consensus 134 ~sl~lLs~~~~~~v~~m~~agLPStLVkcLYLffdlP~~~~~~~~~~~~~s~~~~~e~r~~~q~~~vqiL~~Lc~~~-~~ 212 (467)
.++.-+++++....+.++++|....|++.|. .++ ..+++....+|.+||.+. ..
T Consensus 315 ~aL~nl~~~~~~~~~~i~~~g~l~~L~~LL~-------~~~------------------~~i~~~a~~aL~nl~~~~~~~ 369 (529)
T 3tpo_A 315 RAIGNIVTGTDEQTQKVIDAGALAVFPSLLT-------NPK------------------TNIQKEATWTMSNITAGRQDQ 369 (529)
T ss_dssp HHHHHHTTSCHHHHHHHHHTTGGGGHHHHTT-------CSS------------------HHHHHHHHHHHHHHHTSCHHH
T ss_pred HHHHHHHccchHHHHHHhhcccHHHHHHHHc-------CCC------------------HHHHHHHHHHHHHHhcccHHH
Confidence 7777777777776788899999888888652 111 124455667888898754 44
Q ss_pred cccccccCchhHHHHHHhCCCCCCccchhHHHHHHHHHHhhcCCChhhHHHHhhhcHHHHHHHHHhhcCCCCCChHHHHH
Q psy7103 213 AEELSNKDDLTLLFSAITSLCPPYNVIWRKSAAEILMSLSSQALTPKVVQYVHDKGCIALCIENMTRRKGQDLTPLEIVE 292 (467)
Q Consensus 213 ~EeL~~~DdLqlLF~~~ts~cp~~n~~WR~~a~~vL~~iS~~~lt~~vi~YI~~k~cI~~~l~nl~~~~~~~~s~~e~ve 292 (467)
.+.+++.+-+..|...+.+ .+...|+.|...|..++.++ ++.-+.||.+.|||..+++=+... | .+++.
T Consensus 370 ~~~v~~~g~i~~Lv~lL~~----~~~~v~~~A~~aL~nl~~~~-~~~~~~~l~~~g~i~~L~~LL~~~--d----~~i~~ 438 (529)
T 3tpo_A 370 IQQVVNHGLVPFLVGVLSK----ADFKTQKAAAWAITNYTSGG-TVEQIVYLVHCGIIEPLMNLLSAK--D----TKIIQ 438 (529)
T ss_dssp HHHHHHTTHHHHHHHHHHS----SCHHHHHHHHHHHHHHHHHS-CHHHHHHHHHTTCHHHHHHGGGCS--C----HHHHH
T ss_pred HHHHHhcCcHHHHHHHhcC----CCHHHHHHHHHHHHHHHcCC-CHHHHHHHHHCcCHHHHHHHhcCC--C----HHHHH
Confidence 5667777778888888765 35678999999999997544 778899999999999998766543 3 34444
Q ss_pred HH-HHHHHHhhhch--hhhHHHHHHHHhccChHHHHH
Q psy7103 293 MF-VSVFCFLKDSS--EVSQILLKDFKEAHGYTFLKN 326 (467)
Q Consensus 293 ~~-~~v~~fLkdS~--~~S~~LlddF~~~~GY~fL~~ 326 (467)
++ .++-.+++-.- .-...+..-|+.+.|-..|.+
T Consensus 439 ~~L~aL~nil~~~~~~~~~~~~~~~iee~ggl~~ie~ 475 (529)
T 3tpo_A 439 VILDAISNIFQAAEKLGETEKLSIMIEECGGLDKIEA 475 (529)
T ss_dssp HHHHHHHHHHHHHHTTTCHHHHHHHHHHTTCHHHHTG
T ss_pred HHHHHHHHHHHHhHhccChHHHHHHHHHCCcHHHHHH
Confidence 33 34434443211 123345556777888655443
No 8
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct}
Probab=94.05 E-value=0.66 Score=41.89 Aligned_cols=164 Identities=13% Similarity=0.147 Sum_probs=107.1
Q ss_pred hhHHHHHHhcCChhHHHHHHHHhhcCCCCChhhhhccCCCCCCchhHHHHHHHHHHHHHHHHHhc-CCcccccccccCch
Q psy7103 144 VSLVEVMTKASLPSTLVKCLYLFFDLPQMNEEEANITDVNSDFTPRERRILLQKIFVQLLVRLCS-HSAPAEELSNKDDL 222 (467)
Q Consensus 144 ~~~v~~m~~agLPStLVkcLYLffdlP~~~~~~~~~~~~~s~~~~~e~r~~~q~~~vqiL~~Lc~-~~~~~EeL~~~DdL 222 (467)
.+..+.+++.|.-..|++.|.- .+ ..++......|.+|+. .+...+.+++..-+
T Consensus 44 ~~~~~~~~~~g~i~~L~~lL~~-------~~------------------~~v~~~a~~~L~~l~~~~~~~~~~i~~~g~i 98 (252)
T 4db8_A 44 NEQIQAVIDAGALPALVQLLSS-------PN------------------EQILQEALWALSNIASGGNEQIQAVIDAGAL 98 (252)
T ss_dssp HHHHHHHHHTTHHHHHHHGGGC-------SC------------------HHHHHHHHHHHHHHTTSCHHHHHHHHHTTHH
T ss_pred CchHHHHHHcCcHHHHHHHHcC-------CC------------------HHHHHHHHHHHHHHhcCCHHHHHHHHHcCCH
Confidence 3346777888877777776531 11 2345566788899997 67788888888889
Q ss_pred hHHHHHHhCCCCCCccchhHHHHHHHHHHhhcCCChhhHHHHhhhcHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHhh
Q psy7103 223 TLLFSAITSLCPPYNVIWRKSAAEILMSLSSQALTPKVVQYVHDKGCIALCIENMTRRKGQDLTPLEIVEMFVSVFCFLK 302 (467)
Q Consensus 223 qlLF~~~ts~cp~~n~~WR~~a~~vL~~iS~~~lt~~vi~YI~~k~cI~~~l~nl~~~~~~~~s~~e~ve~~~~v~~fLk 302 (467)
..|...+.+ .+..-|+.|..+|..++.+ .+..+..+...|.|..+++-+... + .++.+.+...++-|-
T Consensus 99 ~~L~~lL~~----~~~~v~~~a~~~L~~l~~~--~~~~~~~~~~~~~i~~L~~lL~~~--~----~~v~~~a~~~L~~l~ 166 (252)
T 4db8_A 99 PALVQLLSS----PNEQILQEALWALSNIASG--GNEQIQAVIDAGALPALVQLLSSP--N----EQILQEALWALSNIA 166 (252)
T ss_dssp HHHHHGGGC----SCHHHHHHHHHHHHHHTTS--CHHHHHHHHHTTHHHHHHHGGGCS--C----HHHHHHHHHHHHHHT
T ss_pred HHHHHHHcC----CCHHHHHHHHHHHHHhhcC--CchHHHHHHHCCCHHHHHHHHhCC--C----HHHHHHHHHHHHHHH
Confidence 988888876 4678899999999999853 344448899999999999988654 2 344444444444444
Q ss_pred hchhhhHHHHHHHHhccChHHHHHHHHhhccCCChhHHHHHHHHHHHHHHhH
Q psy7103 303 DSSEVSQILLKDFKEAHGYTFLKNFLINLENDRSSEAQEAIRNLILMIATLS 354 (467)
Q Consensus 303 dS~~~S~~LlddF~~~~GY~fL~~flLr~e~~~~~e~~~~l~~Ll~li~sLt 354 (467)
... ......+...++.+.|.+++.. . .....++-+..+..|+
T Consensus 167 ~~~---~~~~~~~~~~~~i~~L~~ll~~---~----~~~v~~~a~~~L~~l~ 208 (252)
T 4db8_A 167 SGG---NEQIQAVIDAGALPALVQLLSS---P----NEQILQEALWALSNIA 208 (252)
T ss_dssp TSC---HHHHHHHHHTTCHHHHHHGGGC---S----SHHHHHHHHHHHHHHT
T ss_pred cCC---hHHHHHHHHCCCHHHHHHHHCC---C----CHHHHHHHHHHHHHHh
Confidence 322 2223334456778887776631 1 2233444555555554
No 9
>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A
Probab=94.04 E-value=3.4 Score=40.21 Aligned_cols=162 Identities=17% Similarity=0.200 Sum_probs=107.9
Q ss_pred hhHHHHHHHHhcCChhHHHHHHhcCChhHHHHHHHHhhcCCCCChhhhhccCCCCCCchhHHHHHHHHHHHHHHHHHhc-
Q psy7103 130 WMLLSTLNLLAAGDVSLVEVMTKASLPSTLVKCLYLFFDLPQMNEEEANITDVNSDFTPRERRILLQKIFVQLLVRLCS- 208 (467)
Q Consensus 130 ~~LL~sl~lLs~~~~~~v~~m~~agLPStLVkcLYLffdlP~~~~~~~~~~~~~s~~~~~e~r~~~q~~~vqiL~~Lc~- 208 (467)
...+.++.-|+.++.+..+.+++.|+-..|++.|. -| + ..+.+.....|.+|+.
T Consensus 252 ~~a~~~L~~l~~~~~~~~~~~~~~~~l~~L~~ll~----~~---~------------------~~vr~~a~~~L~~l~~~ 306 (450)
T 2jdq_A 252 SPALRAVGNIVTGDDIQTQVILNCSALQSLLHLLS----SP---K------------------ESIKKEACWTISNITAG 306 (450)
T ss_dssp HHHHHHHHHHTTSCHHHHHHHHTTTHHHHHHHHTT----CS---S------------------HHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHhhCChHHHHHHHHCccHHHHHHHHc----CC---C------------------HHHHHHHHHHHHHHHcC
Confidence 44566777777777766677788776666665541 11 1 1234456678888886
Q ss_pred CCcccccccccCchhHHHHHHhCCCCCCccchhHHHHHHHHHHhhcCCChhhHHHHhhhcHHHHHHHHHhhcCCCCCChH
Q psy7103 209 HSAPAEELSNKDDLTLLFSAITSLCPPYNVIWRKSAAEILMSLSSQALTPKVVQYVHDKGCIALCIENMTRRKGQDLTPL 288 (467)
Q Consensus 209 ~~~~~EeL~~~DdLqlLF~~~ts~cp~~n~~WR~~a~~vL~~iS~~~lt~~vi~YI~~k~cI~~~l~nl~~~~~~~~s~~ 288 (467)
.+...+.+++..-+..|+..+.+ .+..-|+.|..+|..++.++ ++..++|+-..++|..+++-+... + .
T Consensus 307 ~~~~~~~~~~~~~l~~L~~~l~~----~~~~v~~~a~~~L~~l~~~~-~~~~~~~l~~~~~i~~L~~ll~~~--~----~ 375 (450)
T 2jdq_A 307 NRAQIQTVIDANIFPALISILQT----AEFRTRKEAAWAITNATSGG-SAEQIKYLVELGCIKPLCDLLTVM--D----S 375 (450)
T ss_dssp CHHHHHHHHHTTHHHHHHHHHHH----SCHHHHHHHHHHHHHHHHHC-CHHHHHHHHHHTCHHHHHHGGGSS--C----H
T ss_pred CHHHHHHHHHCCCHHHHHHHHhc----CCHHHHHHHHHHHHHHHcCC-CHHHHHHHHHCCCHHHHHHHhcCC--C----H
Confidence 45566777777778888888864 35678999999999998644 678899999999999999888754 2 3
Q ss_pred HHHHHHH-HHHHHhhhchhhh-------HHHHHHHHhccChHHHHHH
Q psy7103 289 EIVEMFV-SVFCFLKDSSEVS-------QILLKDFKEAHGYTFLKNF 327 (467)
Q Consensus 289 e~ve~~~-~v~~fLkdS~~~S-------~~LlddF~~~~GY~fL~~f 327 (467)
++.+.+. ++-.++....... ....+.|...+|-..|.++
T Consensus 376 ~v~~~a~~aL~~l~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~l~~l 422 (450)
T 2jdq_A 376 KIVQVALNGLENILRLGEQEAKRNGTGINPYCALIEEAYGLDKIEFL 422 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSCSCCCHHHHHHHHHHCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhchhhhhccccchhHHHHHHHHcCcHHHHHHH
Confidence 4444443 4434443322211 2456778888887777664
No 10
>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A
Probab=93.97 E-value=4.4 Score=41.22 Aligned_cols=182 Identities=13% Similarity=0.085 Sum_probs=110.4
Q ss_pred HHHHHHHhcCChhHHHHHHhcCChhHHHHHHHHhhcCCCCChhhhhccCCCCCCchhHHHHHHHHHHHHHHHHHhcC-Cc
Q psy7103 133 LSTLNLLAAGDVSLVEVMTKASLPSTLVKCLYLFFDLPQMNEEEANITDVNSDFTPRERRILLQKIFVQLLVRLCSH-SA 211 (467)
Q Consensus 133 L~sl~lLs~~~~~~v~~m~~agLPStLVkcLYLffdlP~~~~~~~~~~~~~s~~~~~e~r~~~q~~~vqiL~~Lc~~-~~ 211 (467)
+.+|.-|+.++.+.++.+++.|+...|++.|. + ++ ..++...+..|..||.+ +.
T Consensus 278 ~~~L~~L~~~~~~~~~~~~~~~~v~~Lv~lL~---~----~~------------------~~v~~~a~~~L~~l~~~~~~ 332 (530)
T 1wa5_B 278 CWAISYLSDGPQEAIQAVIDVRIPKRLVELLS---H----ES------------------TLVQTPALRAVGNIVTGNDL 332 (530)
T ss_dssp HHHHHHHHSSCHHHHHHHHHTTCHHHHHHGGG---C----SC------------------HHHHHHHHHHHHHHTTSCHH
T ss_pred HHHHHHHhCCCHHHHHHHHhcCcHHHHHHHHC---C----CC------------------hhhHHHHHHHHHHHHcCCHH
Confidence 45555666665555667777777777777552 0 11 23345566788888865 44
Q ss_pred ccccccccCchhHHHHHHhCCCCCCccchhHHHHHHHHHHhhcCCChhhHHHHhhhcHHHHHHHHHhhcCCCCCChHHHH
Q psy7103 212 PAEELSNKDDLTLLFSAITSLCPPYNVIWRKSAAEILMSLSSQALTPKVVQYVHDKGCIALCIENMTRRKGQDLTPLEIV 291 (467)
Q Consensus 212 ~~EeL~~~DdLqlLF~~~ts~cp~~n~~WR~~a~~vL~~iS~~~lt~~vi~YI~~k~cI~~~l~nl~~~~~~~~s~~e~v 291 (467)
..+.++...-+..|...+.+ .+..-|+.|...|..++. -++..++++-..+.|..+++-+... + +....
T Consensus 333 ~~~~~~~~~~l~~L~~lL~~----~~~~vr~~A~~aL~~l~~--~~~~~~~~~~~~~~l~~L~~lL~~~--~---~~v~~ 401 (530)
T 1wa5_B 333 QTQVVINAGVLPALRLLLSS----PKENIKKEACWTISNITA--GNTEQIQAVIDANLIPPLVKLLEVA--E---YKTKK 401 (530)
T ss_dssp HHHHHHHTTHHHHHHHHTTC----SCHHHHHHHHHHHHHHTT--SCHHHHHHHHHTTCHHHHHHHHHHS--C---HHHHH
T ss_pred HHHHHHHcchHHHHHHHHcC----CCHHHHHHHHHHHHHHHc--CCHHHHHHHHHCCCHHHHHHHHhcC--C---HHHHH
Confidence 45556666667777777654 267789999999999984 2567788888899999999888654 2 23444
Q ss_pred HHHHHHHHHhhhchhhhHHHHHHHHhccChHHHHHHHHhhccCCChhHHHHHHHHHHHHHHhHhhcc
Q psy7103 292 EMFVSVFCFLKDSSEVSQILLKDFKEAHGYTFLKNFLINLENDRSSEAQEAIRNLILMIATLSMCGY 358 (467)
Q Consensus 292 e~~~~v~~fLkdS~~~S~~LlddF~~~~GY~fL~~flLr~e~~~~~e~~~~l~~Ll~li~sLt~cG~ 358 (467)
+++.++-.+.....+. +.....+...++-+.|.+++-. . .....+..+..+..+...+.
T Consensus 402 ~a~~aL~~l~~~~~~~-~~~~~~l~~~~~l~~L~~ll~~----~---~~~v~~~al~aL~~l~~~~~ 460 (530)
T 1wa5_B 402 EACWAISNASSGGLQR-PDIIRYLVSQGCIKPLCDLLEI----A---DNRIIEVTLDALENILKMGE 460 (530)
T ss_dssp HHHHHHHHHHHHTTTC-THHHHHHHHTTCHHHHHHHTTT----C---CHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCc-HHHHHHHHHCCCHHHHHHHHhC----C---CHHHHHHHHHHHHHHHHhhh
Confidence 4455544444443210 0233344456777777776521 1 12334455555556655543
No 11
>4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A
Probab=93.94 E-value=0.96 Score=45.95 Aligned_cols=160 Identities=15% Similarity=0.191 Sum_probs=104.6
Q ss_pred HHHHHHHhcCChhHHHHHHhcCChhHHHHHHHHhhcCCCCChhhhhccCCCCCCchhHHHHHHHHHHHHHHHHHhcC-Cc
Q psy7103 133 LSTLNLLAAGDVSLVEVMTKASLPSTLVKCLYLFFDLPQMNEEEANITDVNSDFTPRERRILLQKIFVQLLVRLCSH-SA 211 (467)
Q Consensus 133 L~sl~lLs~~~~~~v~~m~~agLPStLVkcLYLffdlP~~~~~~~~~~~~~s~~~~~e~r~~~q~~~vqiL~~Lc~~-~~ 211 (467)
+.+|.-|+.++.+..+.+++.|+-..|++.|. -+. ...+++....+|.+|+.. +.
T Consensus 307 ~~~L~nl~~~~~~~~~~~~~~~~l~~L~~lL~----~~~--------------------~~~v~~~A~~~L~nl~~~~~~ 362 (528)
T 4b8j_A 307 LRTVGNIVTGDDAQTQCIIDHQALPCLLSLLT----QNL--------------------KKSIKKEACWTISNITAGNKD 362 (528)
T ss_dssp HHHHHHHTTSCHHHHHHHHTTTHHHHHHHHHH----SCC--------------------CHHHHHHHHHHHHHHHTSCHH
T ss_pred HHHHHHHHcCCHHHHHHHHHhhhHHHHHHHHc----CCC--------------------cHHHHHHHHHHHHHHHCCCHH
Confidence 44455555555555566666666666666553 110 123445566788888863 34
Q ss_pred ccccccccCchhHHHHHHhCCCCCCccchhHHHHHHHHHHhhcCCChhhHHHHhhhcHHHHHHHHHhhcCCCCCChHHHH
Q psy7103 212 PAEELSNKDDLTLLFSAITSLCPPYNVIWRKSAAEILMSLSSQALTPKVVQYVHDKGCIALCIENMTRRKGQDLTPLEIV 291 (467)
Q Consensus 212 ~~EeL~~~DdLqlLF~~~ts~cp~~n~~WR~~a~~vL~~iS~~~lt~~vi~YI~~k~cI~~~l~nl~~~~~~~~s~~e~v 291 (467)
.++.+++.+-+..|+..+.+. +...|+.|...|..++.++ ++..++|+...++|..+++-+... + .+++
T Consensus 363 ~~~~~~~~~~i~~L~~lL~~~----~~~v~~~a~~aL~nl~~~~-~~~~~~~l~~~~~i~~L~~lL~~~--d----~~v~ 431 (528)
T 4b8j_A 363 QIQAVINAGIIGPLVNLLQTA----EFDIKKEAAWAISNATSGG-SHDQIKYLVSEGCIKPLCDLLICP--D----IRIV 431 (528)
T ss_dssp HHHHHHHTTCHHHHHHHHHHS----CHHHHHHHHHHHHHHHHHS-CHHHHHHHHHTTCHHHHHHGGGCS--C----HHHH
T ss_pred HHHHHHHCCCHHHHHHHHhcC----CHHHHHHHHHHHHHHHcCC-CHHHHHHHHHCCCHHHHHHHHcCC--C----HHHH
Confidence 466777778888888888653 6788999999999998654 788999999999999999888764 3 3555
Q ss_pred HHHHHHHHHh-hhchhh-------hHHHHHHHHhccChHHHHHH
Q psy7103 292 EMFVSVFCFL-KDSSEV-------SQILLKDFKEAHGYTFLKNF 327 (467)
Q Consensus 292 e~~~~v~~fL-kdS~~~-------S~~LlddF~~~~GY~fL~~f 327 (467)
..+.-.++-| +..... ......-|..++|...|.++
T Consensus 432 ~~al~~L~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~~L 475 (528)
T 4b8j_A 432 TVCLEGLENILKVGETDKTLAAGDVNVFSQMIDEAEGLEKIENL 475 (528)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCSCCHHHHHHHHTTHHHHHHHG
T ss_pred HHHHHHHHHHHHHHHHhhhcccccccHHHHHHHHCCcHHHHHHH
Confidence 5544444433 333221 11356677777777766653
No 12
>4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A
Probab=93.61 E-value=1.9 Score=43.80 Aligned_cols=183 Identities=14% Similarity=0.082 Sum_probs=121.1
Q ss_pred HHHHHHHHhcCChhHHHHHHhcCChhHHHHHHHHhhcCCCCChhhhhccCCCCCCchhHHHHHHHHHHHHHHHHHhcC-C
Q psy7103 132 LLSTLNLLAAGDVSLVEVMTKASLPSTLVKCLYLFFDLPQMNEEEANITDVNSDFTPRERRILLQKIFVQLLVRLCSH-S 210 (467)
Q Consensus 132 LL~sl~lLs~~~~~~v~~m~~agLPStLVkcLYLffdlP~~~~~~~~~~~~~s~~~~~e~r~~~q~~~vqiL~~Lc~~-~ 210 (467)
.+.++.-|+.++.+.++.++++|+...|+++|.- ++ ..++.....+|.+||.+ +
T Consensus 264 a~~aL~~l~~~~~~~~~~~~~~g~v~~Lv~lL~~-------~~------------------~~v~~~a~~~L~nl~~~~~ 318 (528)
T 4b8j_A 264 ACWALSYLSDGTNDKIQAVIEAGVCPRLVELLLH-------PS------------------PSVLIPALRTVGNIVTGDD 318 (528)
T ss_dssp HHHHHHHHTSSCHHHHHHHHHTTCHHHHHHHTTC-------SC------------------HHHHHHHHHHHHHHTTSCH
T ss_pred HHHHHHHHHcCCHHHHHHHHHcCHHHHHHHHHcC-------CC------------------hhHHHHHHHHHHHHHcCCH
Confidence 4456666777666666777888888888877620 11 23455677888999984 4
Q ss_pred cccccccccCchhHHHHHHhCCCCCCccchhHHHHHHHHHHhhcCCChhhHHHHhhhcHHHHHHHHHhhcCCCCCChHHH
Q psy7103 211 APAEELSNKDDLTLLFSAITSLCPPYNVIWRKSAAEILMSLSSQALTPKVVQYVHDKGCIALCIENMTRRKGQDLTPLEI 290 (467)
Q Consensus 211 ~~~EeL~~~DdLqlLF~~~ts~cp~~n~~WR~~a~~vL~~iS~~~lt~~vi~YI~~k~cI~~~l~nl~~~~~~~~s~~e~ 290 (467)
...+.+++..-+..|...+.+. ++..-|+.|..+|..|+. + ++..++++-..++|..+++-+... + +.-.
T Consensus 319 ~~~~~~~~~~~l~~L~~lL~~~---~~~~v~~~A~~~L~nl~~-~-~~~~~~~~~~~~~i~~L~~lL~~~--~---~~v~ 388 (528)
T 4b8j_A 319 AQTQCIIDHQALPCLLSLLTQN---LKKSIKKEACWTISNITA-G-NKDQIQAVINAGIIGPLVNLLQTA--E---FDIK 388 (528)
T ss_dssp HHHHHHHTTTHHHHHHHHHHSC---CCHHHHHHHHHHHHHHHT-S-CHHHHHHHHHTTCHHHHHHHHHHS--C---HHHH
T ss_pred HHHHHHHHhhhHHHHHHHHcCC---CcHHHHHHHHHHHHHHHC-C-CHHHHHHHHHCCCHHHHHHHHhcC--C---HHHH
Confidence 5566777777788888888642 367789999999999984 3 678889999999999999988765 3 2334
Q ss_pred HHHHHHHHHHhhhchhhhHHHHHHHHhccChHHHHHHHHhhccCCChhHHHHHHHHHHHHHHhHhhccc
Q psy7103 291 VEMFVSVFCFLKDSSEVSQILLKDFKEAHGYTFLKNFLINLENDRSSEAQEAIRNLILMIATLSMCGYV 359 (467)
Q Consensus 291 ve~~~~v~~fLkdS~~~S~~LlddF~~~~GY~fL~~flLr~e~~~~~e~~~~l~~Ll~li~sLt~cG~~ 359 (467)
.+++.++-.+.... ++.....+...++.+.|.++|-. . ........+..+..+...|..
T Consensus 389 ~~a~~aL~nl~~~~---~~~~~~~l~~~~~i~~L~~lL~~----~---d~~v~~~al~~L~~l~~~~~~ 447 (528)
T 4b8j_A 389 KEAAWAISNATSGG---SHDQIKYLVSEGCIKPLCDLLIC----P---DIRIVTVCLEGLENILKVGET 447 (528)
T ss_dssp HHHHHHHHHHHHHS---CHHHHHHHHHTTCHHHHHHGGGC----S---CHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCC---CHHHHHHHHHCCCHHHHHHHHcC----C---CHHHHHHHHHHHHHHHHHHHH
Confidence 44444444444431 23344455567777777776532 1 224455666666666665543
No 13
>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A
Probab=93.52 E-value=1.9 Score=43.98 Aligned_cols=161 Identities=15% Similarity=0.134 Sum_probs=106.6
Q ss_pred hhHHHHHHHHhcCChhHHHHHHhcCChhHHHHHHHHhhcCCCCChhhhhccCCCCCCchhHHHHHHHHHHHHHHHHHhcC
Q psy7103 130 WMLLSTLNLLAAGDVSLVEVMTKASLPSTLVKCLYLFFDLPQMNEEEANITDVNSDFTPRERRILLQKIFVQLLVRLCSH 209 (467)
Q Consensus 130 ~~LL~sl~lLs~~~~~~v~~m~~agLPStLVkcLYLffdlP~~~~~~~~~~~~~s~~~~~e~r~~~q~~~vqiL~~Lc~~ 209 (467)
...+.++.-|+.++.+..+.+++.|+-..|++.|. -+ + ..+++..+..|.+|+..
T Consensus 317 ~~a~~~L~~l~~~~~~~~~~~~~~~~l~~L~~lL~----~~---~------------------~~vr~~A~~aL~~l~~~ 371 (530)
T 1wa5_B 317 TPALRAVGNIVTGNDLQTQVVINAGVLPALRLLLS----SP---K------------------ENIKKEACWTISNITAG 371 (530)
T ss_dssp HHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTT----CS---C------------------HHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHcchHHHHHHHHc----CC---C------------------HHHHHHHHHHHHHHHcC
Confidence 34566777778777776778888887777766552 11 1 23445566788888863
Q ss_pred -CcccccccccCchhHHHHHHhCCCCCCccchhHHHHHHHHHHhhcCCCh--hhHHHHhhhcHHHHHHHHHhhcCCCCCC
Q psy7103 210 -SAPAEELSNKDDLTLLFSAITSLCPPYNVIWRKSAAEILMSLSSQALTP--KVVQYVHDKGCIALCIENMTRRKGQDLT 286 (467)
Q Consensus 210 -~~~~EeL~~~DdLqlLF~~~ts~cp~~n~~WR~~a~~vL~~iS~~~lt~--~vi~YI~~k~cI~~~l~nl~~~~~~~~s 286 (467)
+..++.+++..-+..|+..+.+ .+...|+.|...|..++..+ ++ ..++|+-..++|..+++-+... +
T Consensus 372 ~~~~~~~~~~~~~l~~L~~lL~~----~~~~v~~~a~~aL~~l~~~~-~~~~~~~~~l~~~~~l~~L~~ll~~~--~--- 441 (530)
T 1wa5_B 372 NTEQIQAVIDANLIPPLVKLLEV----AEYKTKKEACWAISNASSGG-LQRPDIIRYLVSQGCIKPLCDLLEIA--D--- 441 (530)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHH----SCHHHHHHHHHHHHHHHHHT-TTCTHHHHHHHHTTCHHHHHHHTTTC--C---
T ss_pred CHHHHHHHHHCCCHHHHHHHHhc----CCHHHHHHHHHHHHHHHhcC-CCcHHHHHHHHHCCCHHHHHHHHhCC--C---
Confidence 4556667777778888888754 35678999999999998654 44 7889999999999999887654 2
Q ss_pred hHHHHHHH-HHHHHHhhhchhhh-------HHHHHHHHhccChHHHHH
Q psy7103 287 PLEIVEMF-VSVFCFLKDSSEVS-------QILLKDFKEAHGYTFLKN 326 (467)
Q Consensus 287 ~~e~ve~~-~~v~~fLkdS~~~S-------~~LlddF~~~~GY~fL~~ 326 (467)
.++.+.+ .++-.++....... ......|..++|-..|.+
T Consensus 442 -~~v~~~al~aL~~l~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~L~~ 488 (530)
T 1wa5_B 442 -NRIIEVTLDALENILKMGEADKEARGLNINENADFIEKAGGMEKIFN 488 (530)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHHHHTCSSCHHHHHHHHTTHHHHHHG
T ss_pred -HHHHHHHHHHHHHHHHhhhhhhhcccccccHHHHHHHHcCcHHHHHH
Confidence 3444444 34444444433211 234556667777666655
No 14
>3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B
Probab=93.04 E-value=2.7 Score=43.32 Aligned_cols=157 Identities=12% Similarity=0.121 Sum_probs=106.1
Q ss_pred HHHHHHHhcCChhHHHHHHhcCChhHHHHHHHHhhcCCCCChhhhhccCCCCCCchhHHHHHHHHHHHHHHHHHhcC-Cc
Q psy7103 133 LSTLNLLAAGDVSLVEVMTKASLPSTLVKCLYLFFDLPQMNEEEANITDVNSDFTPRERRILLQKIFVQLLVRLCSH-SA 211 (467)
Q Consensus 133 L~sl~lLs~~~~~~v~~m~~agLPStLVkcLYLffdlP~~~~~~~~~~~~~s~~~~~e~r~~~q~~~vqiL~~Lc~~-~~ 211 (467)
+.++.-|+.++.+.++.++++|+...||+.|. .+ ...++......+.+|+.+ +.
T Consensus 272 ~~aL~~l~~~~~~~~~~v~~~g~i~~Lv~lL~-------~~------------------~~~v~~~a~~aL~nl~~~~~~ 326 (529)
T 3tpo_A 272 CWAISYLTDGPNERIEMVVKKGVVPQLVKLLG-------AT------------------ELPIVTPALRAIGNIVTGTDE 326 (529)
T ss_dssp HHHHHHHHSSCHHHHHHHHTTTCHHHHHHHHT-------CS------------------CHHHHHHHHHHHHHHTTSCHH
T ss_pred HHHHHHhhhhhhhhHHHHHhccchHHHHHHhc-------CC------------------ChhHHHHHHHHHHHHHccchH
Confidence 34556666676666677778888888887652 11 123455566778888765 44
Q ss_pred ccccccccCchhHHHHHHhCCCCCCccchhHHHHHHHHHHhhcCCChhhHHHHhhhcHHHHHHHHHhhcCCCCCChHHHH
Q psy7103 212 PAEELSNKDDLTLLFSAITSLCPPYNVIWRKSAAEILMSLSSQALTPKVVQYVHDKGCIALCIENMTRRKGQDLTPLEIV 291 (467)
Q Consensus 212 ~~EeL~~~DdLqlLF~~~ts~cp~~n~~WR~~a~~vL~~iS~~~lt~~vi~YI~~k~cI~~~l~nl~~~~~~~~s~~e~v 291 (467)
..+.++...-+..|...+.+ .+..-|+.|..+|..|+. -++..++.+.+.|.|..++.-++.. +. ....
T Consensus 327 ~~~~i~~~g~l~~L~~LL~~----~~~~i~~~a~~aL~nl~~--~~~~~~~~v~~~g~i~~Lv~lL~~~--~~---~v~~ 395 (529)
T 3tpo_A 327 QTQKVIDAGALAVFPSLLTN----PKTNIQKEATWTMSNITA--GRQDQIQQVVNHGLVPFLVGVLSKA--DF---KTQK 395 (529)
T ss_dssp HHHHHHHTTGGGGHHHHTTC----SSHHHHHHHHHHHHHHHT--SCHHHHHHHHHTTHHHHHHHHHHSS--CH---HHHH
T ss_pred HHHHHhhcccHHHHHHHHcC----CCHHHHHHHHHHHHHHhc--ccHHHHHHHHhcCcHHHHHHHhcCC--CH---HHHH
Confidence 56667778888888888764 345678999999999984 3678888999999999999988765 32 3334
Q ss_pred HHHHHHHHHhhhchhhhHHHHHHHHhccChHHHHHHH
Q psy7103 292 EMFVSVFCFLKDSSEVSQILLKDFKEAHGYTFLKNFL 328 (467)
Q Consensus 292 e~~~~v~~fLkdS~~~S~~LlddF~~~~GY~fL~~fl 328 (467)
+++.++..+...+ +..-...+..+.+-+.|.++|
T Consensus 396 ~A~~aL~nl~~~~---~~~~~~~l~~~g~i~~L~~LL 429 (529)
T 3tpo_A 396 AAAWAITNYTSGG---TVEQIVYLVHCGIIEPLMNLL 429 (529)
T ss_dssp HHHHHHHHHHHHS---CHHHHHHHHHTTCHHHHHHGG
T ss_pred HHHHHHHHHHcCC---CHHHHHHHHHCcCHHHHHHHh
Confidence 4444544444332 223334455677888888866
No 15
>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A
Probab=91.25 E-value=5.9 Score=38.43 Aligned_cols=180 Identities=14% Similarity=0.078 Sum_probs=108.5
Q ss_pred HHHHHHhcCChhHHHHHHhcCChhHHHHHHHHhhcCCCCChhhhhccCCCCCCchhHHHHHHHHHHHHHHHHHhcCCc-c
Q psy7103 134 STLNLLAAGDVSLVEVMTKASLPSTLVKCLYLFFDLPQMNEEEANITDVNSDFTPRERRILLQKIFVQLLVRLCSHSA-P 212 (467)
Q Consensus 134 ~sl~lLs~~~~~~v~~m~~agLPStLVkcLYLffdlP~~~~~~~~~~~~~s~~~~~e~r~~~q~~~vqiL~~Lc~~~~-~ 212 (467)
.++.-|+..+.+..+.+.+.++...|++.|. .++ ..++......|..|+.+.. .
T Consensus 214 ~~L~~l~~~~~~~~~~~~~~~~i~~L~~ll~-------~~~------------------~~v~~~a~~~L~~l~~~~~~~ 268 (450)
T 2jdq_A 214 WALSYLSDGPNDKIQAVIDAGVCRRLVELLM-------HND------------------YKVVSPALRAVGNIVTGDDIQ 268 (450)
T ss_dssp HHHHHHTSSSHHHHHHHHHTTTHHHHHHHTT-------CSC------------------HHHHHHHHHHHHHHTTSCHHH
T ss_pred HHHHHHHCCCcHHHHHHHHcCcHHHHHHHHC-------CCc------------------hhHHHHHHHHHHHHhhCChHH
Confidence 3445555555444556666677666776542 111 2344556778888887654 3
Q ss_pred cccccccCchhHHHHHHhCCCCCCccchhHHHHHHHHHHhhcCCChhhHHHHhhhcHHHHHHHHHhhcCCCCCChHHHHH
Q psy7103 213 AEELSNKDDLTLLFSAITSLCPPYNVIWRKSAAEILMSLSSQALTPKVVQYVHDKGCIALCIENMTRRKGQDLTPLEIVE 292 (467)
Q Consensus 213 ~EeL~~~DdLqlLF~~~ts~cp~~n~~WR~~a~~vL~~iS~~~lt~~vi~YI~~k~cI~~~l~nl~~~~~~~~s~~e~ve 292 (467)
.+.+++..-+..|...+.+ .+..-|+.|..+|..++. -++..++.+.+.+.+..+++-++.. + +.-..+
T Consensus 269 ~~~~~~~~~l~~L~~ll~~----~~~~vr~~a~~~L~~l~~--~~~~~~~~~~~~~~l~~L~~~l~~~--~---~~v~~~ 337 (450)
T 2jdq_A 269 TQVILNCSALQSLLHLLSS----PKESIKKEACWTISNITA--GNRAQIQTVIDANIFPALISILQTA--E---FRTRKE 337 (450)
T ss_dssp HHHHHTTTHHHHHHHHTTC----SSHHHHHHHHHHHHHHTT--SCHHHHHHHHHTTHHHHHHHHHHHS--C---HHHHHH
T ss_pred HHHHHHCccHHHHHHHHcC----CCHHHHHHHHHHHHHHHc--CCHHHHHHHHHCCCHHHHHHHHhcC--C---HHHHHH
Confidence 4455666677777777754 356779999999999984 2566777777889999999888764 2 244445
Q ss_pred HHHHHHHHhhhchhhhHHHHHHHHhccChHHHHHHHHhhccCCChhHHHHHHHHHHHHHHhHhhccc
Q psy7103 293 MFVSVFCFLKDSSEVSQILLKDFKEAHGYTFLKNFLINLENDRSSEAQEAIRNLILMIATLSMCGYV 359 (467)
Q Consensus 293 ~~~~v~~fLkdS~~~S~~LlddF~~~~GY~fL~~flLr~e~~~~~e~~~~l~~Ll~li~sLt~cG~~ 359 (467)
++.++-.+..... +.-...+-..++.+.|.+++-. . .....++.+..+..++..|..
T Consensus 338 a~~~L~~l~~~~~---~~~~~~l~~~~~i~~L~~ll~~----~---~~~v~~~a~~aL~~l~~~~~~ 394 (450)
T 2jdq_A 338 AAWAITNATSGGS---AEQIKYLVELGCIKPLCDLLTV----M---DSKIVQVALNGLENILRLGEQ 394 (450)
T ss_dssp HHHHHHHHHHHCC---HHHHHHHHHHTCHHHHHHGGGS----S---CHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCC---HHHHHHHHHCCCHHHHHHHhcC----C---CHHHHHHHHHHHHHHHHhchh
Confidence 5555555554421 2222333456677777776531 1 123345555666666655543
No 16
>3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ...
Probab=90.94 E-value=1.6 Score=44.91 Aligned_cols=122 Identities=13% Similarity=0.181 Sum_probs=83.6
Q ss_pred HHHHHHHHHHHHHhcCC-cccccccccCchhHHHHHHhCCCCCCccchhHHHHHHHHHHhhcCCChhhHHHHhhhcHHHH
Q psy7103 194 LLQKIFVQLLVRLCSHS-APAEELSNKDDLTLLFSAITSLCPPYNVIWRKSAAEILMSLSSQALTPKVVQYVHDKGCIAL 272 (467)
Q Consensus 194 ~~q~~~vqiL~~Lc~~~-~~~EeL~~~DdLqlLF~~~ts~cp~~n~~WR~~a~~vL~~iS~~~lt~~vi~YI~~k~cI~~ 272 (467)
.+++.-...|.+|+.+. ...+.+++.+-+..|...+.+ .+..-|+.|...|..++.++ ++.-+.|+.+.|||..
T Consensus 331 ~v~~~A~~aL~nl~a~~~~~~~~v~~~g~i~~Lv~lL~~----~~~~v~~~Aa~aL~Nl~~~~-~~~~~~~L~~~g~i~~ 405 (510)
T 3ul1_B 331 NIQKEATWTMSNITAGRQDQIQQVVNHGLVPFLVGVLSK----ADFKTQKEAAWAITNYTSGG-TVEQIVYLVHCGIIEP 405 (510)
T ss_dssp HHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHHHS----SCHHHHHHHHHHHHHHHHHC-CHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHHcCcHHHHHHHHhcCCHHHHHHHHcC----CCHHHHHHHHHHHHHHHccC-CHHHHHHHHHCCCHHH
Confidence 45666778888998754 445666677778888888765 36778999999999997654 7788999999999999
Q ss_pred HHHHHhhcCCCCCChHHHHHHH-HHHHHHhhhchh--hhHHHHHHHHhccChHHHHH
Q psy7103 273 CIENMTRRKGQDLTPLEIVEMF-VSVFCFLKDSSE--VSQILLKDFKEAHGYTFLKN 326 (467)
Q Consensus 273 ~l~nl~~~~~~~~s~~e~ve~~-~~v~~fLkdS~~--~S~~LlddF~~~~GY~fL~~ 326 (467)
+++-+... | .+++..+ .++-.+++-.-+ -...+..-|+.+.|-..|.+
T Consensus 406 L~~LL~~~--d----~~i~~~~L~aL~nil~~~~~~~~~~~~~~~iee~ggl~~ie~ 456 (510)
T 3ul1_B 406 LMNLLSAK--D----TKIIQVILDAISNIFQAAEKLGETEKLSIMIEECGGLDKIEA 456 (510)
T ss_dssp HHHGGGCS--C----HHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHTTHHHHHHH
T ss_pred HHHHhcCC--C----HHHHHHHHHHHHHHHHHhHhccchHHHHHHHHHcCcHHHHHH
Confidence 98876544 3 3444443 344444442222 23455566778888666554
No 17
>3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ...
Probab=90.22 E-value=3.9 Score=42.08 Aligned_cols=180 Identities=12% Similarity=0.122 Sum_probs=112.1
Q ss_pred HHHHHHHHhcCChhHHHHHHhcCChhHHHHHHHHhhcCCCCChhhhhccCCCCCCchhHHHHHHHHHHHHHHHHHhcCC-
Q psy7103 132 LLSTLNLLAAGDVSLVEVMTKASLPSTLVKCLYLFFDLPQMNEEEANITDVNSDFTPRERRILLQKIFVQLLVRLCSHS- 210 (467)
Q Consensus 132 LL~sl~lLs~~~~~~v~~m~~agLPStLVkcLYLffdlP~~~~~~~~~~~~~s~~~~~e~r~~~q~~~vqiL~~Lc~~~- 210 (467)
...++.-|+.++.+.++.++++|+...|+++|. .+ ...++......+.+|+.+.
T Consensus 252 A~~aL~~L~~~~~~~~~~i~~~g~i~~Lv~lL~-------~~------------------~~~v~~~al~aL~nl~~~~~ 306 (510)
T 3ul1_B 252 SCWAISYLTDGPNERIEMVVKKGVVPQLVKLLG-------AT------------------ELPIVTPALRAIGNIVTGTD 306 (510)
T ss_dssp HHHHHHHHTSSCHHHHHHHHTTTCHHHHHHHHT-------CS------------------CHHHHHHHHHHHHHHTTSCH
T ss_pred HHHHHHHHhhchhhhHHHHHhcccchhhhhhhc-------CC------------------ChhhhhHHHHHHHHhhcCCH
Confidence 345566677776666677778888888887763 11 1234455667777887654
Q ss_pred cccccccccCchhHHHHHHhCCCCCCccchhHHHHHHHHHHhhcCCChhhHHHHhhhcHHHHHHHHHhhcCCCCCChHHH
Q psy7103 211 APAEELSNKDDLTLLFSAITSLCPPYNVIWRKSAAEILMSLSSQALTPKVVQYVHDKGCIALCIENMTRRKGQDLTPLEI 290 (467)
Q Consensus 211 ~~~EeL~~~DdLqlLF~~~ts~cp~~n~~WR~~a~~vL~~iS~~~lt~~vi~YI~~k~cI~~~l~nl~~~~~~~~s~~e~ 290 (467)
...+.+++.+-+..|...+.+ .+..-|+.|..+|..|+. -++.-++.+.+.|.|..+++-++.. + +.-.
T Consensus 307 ~~~~~i~~~g~l~~L~~LL~~----~~~~v~~~A~~aL~nl~a--~~~~~~~~v~~~g~i~~Lv~lL~~~--~---~~v~ 375 (510)
T 3ul1_B 307 EQTQKVIDAGALAVFPSLLTN----PKTNIQKEATWTMSNITA--GRQDQIQQVVNHGLVPFLVGVLSKA--D---FKTQ 375 (510)
T ss_dssp HHHHHHHHTTGGGGCC-CTTC----SSHHHHHHHHHHHHHHTT--SCHHHHHHHHHTTHHHHHHHHHHSS--C---HHHH
T ss_pred HHHHHHhhccchHHHHHHhcC----CCHHHHHHHHHHHHHHHc--CcHHHHHHHHhcCCHHHHHHHHcCC--C---HHHH
Confidence 344555566666665555543 456678999999999984 3678889999999999999988765 3 2344
Q ss_pred HHHHHHHHHHhhhchhhhHHHHHHHHhccChHHHHHHHHhhccCCChhHHHHHHHHHHHHHHhHhhc
Q psy7103 291 VEMFVSVFCFLKDSSEVSQILLKDFKEAHGYTFLKNFLINLENDRSSEAQEAIRNLILMIATLSMCG 357 (467)
Q Consensus 291 ve~~~~v~~fLkdS~~~S~~LlddF~~~~GY~fL~~flLr~e~~~~~e~~~~l~~Ll~li~sLt~cG 357 (467)
.+++.++..+...+ +..-...+.++.+.+.|.++|-.- ....++..+.-+..+...|
T Consensus 376 ~~Aa~aL~Nl~~~~---~~~~~~~L~~~g~i~~L~~LL~~~-------d~~i~~~~L~aL~nil~~~ 432 (510)
T 3ul1_B 376 KEAAWAITNYTSGG---TVEQIVYLVHCGIIEPLMNLLSAK-------DTKIIQVILDAISNIFQAA 432 (510)
T ss_dssp HHHHHHHHHHHHHC---CHHHHHHHHHTTCHHHHHHGGGCS-------CHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHccC---CHHHHHHHHHCCCHHHHHHHhcCC-------CHHHHHHHHHHHHHHHHHh
Confidence 45555544444332 233344456778888888866211 1233445555555554444
No 18
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A
Probab=90.14 E-value=16 Score=36.32 Aligned_cols=177 Identities=14% Similarity=0.109 Sum_probs=115.5
Q ss_pred hHHHHHHHHhcCChhHHHHHHhcCChhHHHHHHHHhhcCCCCChhhhhccCCCCCCchhHHHHHHHHHHHHHHHHHhcCC
Q psy7103 131 MLLSTLNLLAAGDVSLVEVMTKASLPSTLVKCLYLFFDLPQMNEEEANITDVNSDFTPRERRILLQKIFVQLLVRLCSHS 210 (467)
Q Consensus 131 ~LL~sl~lLs~~~~~~v~~m~~agLPStLVkcLYLffdlP~~~~~~~~~~~~~s~~~~~e~r~~~q~~~vqiL~~Lc~~~ 210 (467)
....++..|+.++.+....+.+.|....|++.|.-- +. .........+|..|+.++
T Consensus 162 ~~~~~L~~la~~~~~~~~~i~~~~~i~~L~~ll~~~-------~~-----------------~~~~~~a~~~L~~l~~~~ 217 (529)
T 1jdh_A 162 ITTDCLQILAYGNQESKLIILASGGPQALVNIMRTY-------TY-----------------EKLLWTTSRVLKVLSVCS 217 (529)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHHC-------CC-----------------HHHHHHHHHHHHHHTTST
T ss_pred HHHHHHHHHHhCCHHHHHHHHHCCCHHHHHHHHHhC-------Ch-----------------HHHHHHHHHHHHHHhcCc
Confidence 345577788887777677888888888888876321 10 112344667888999999
Q ss_pred cccccccccCchhHHHHHHhCCCCCCccchhHHHHHHHHHHhhcCCChhhHHHHhhhcHHHHHHHHHhhcCCCCCChHHH
Q psy7103 211 APAEELSNKDDLTLLFSAITSLCPPYNVIWRKSAAEILMSLSSQALTPKVVQYVHDKGCIALCIENMTRRKGQDLTPLEI 290 (467)
Q Consensus 211 ~~~EeL~~~DdLqlLF~~~ts~cp~~n~~WR~~a~~vL~~iS~~~lt~~vi~YI~~k~cI~~~l~nl~~~~~~~~s~~e~ 290 (467)
...+.+++..-+..|...+.+ .+...++.+..+|..++++.-.. ....++|..+++-+... + .++
T Consensus 218 ~~~~~~~~~g~~~~L~~ll~~----~~~~~~~~a~~~L~~l~~~~~~~-----~~~~~~i~~L~~ll~~~---~---~~v 282 (529)
T 1jdh_A 218 SNKPAIVEAGGMQALGLHLTD----PSQRLVQNCLWTLRNLSDAATKQ-----EGMEGLLGTLVQLLGSD---D---INV 282 (529)
T ss_dssp THHHHHHHTTHHHHHHTTTTS----SCHHHHHHHHHHHHHHHTTCTTC-----SCCHHHHHHHHHHTTCS---C---HHH
T ss_pred ccHHHHHHCCCHHHHHHHHhC----CChHHHHHHHHHHHHHhcCChhh-----HHHHhHHHHHHHHHcCC---C---HHH
Confidence 998888888877777776643 36778999999999998654221 22357788877766433 3 456
Q ss_pred HHHHHHHHHHhhhchhhhHHHHHHHHhccChHHHHHHHHhhccCCChhHHHHHHHHHHHHHHhH
Q psy7103 291 VEMFVSVFCFLKDSSEVSQILLKDFKEAHGYTFLKNFLINLENDRSSEAQEAIRNLILMIATLS 354 (467)
Q Consensus 291 ve~~~~v~~fLkdS~~~S~~LlddF~~~~GY~fL~~flLr~e~~~~~e~~~~l~~Ll~li~sLt 354 (467)
.+.+..+++-|-.. ++.-...+....|.+.|.+++..-... .+..+.-+..+..|+
T Consensus 283 ~~~a~~~L~~L~~~---~~~~~~~~~~~~~v~~L~~ll~~~~~~-----~~v~~~a~~~L~nl~ 338 (529)
T 1jdh_A 283 VTCAAGILSNLTCN---NYKNKMMVCQVGGIEALVRTVLRAGDR-----EDITEPAICALRHLT 338 (529)
T ss_dssp HHHHHHHHHHHTTT---CHHHHHHHHHTTHHHHHHHHHHHHTTC-----HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhcC---CHHHHHHHHHcCChHHHHHHHHccCCH-----HHHHHHHHHHHHHHH
Confidence 66555555555332 234455566778899999888653221 233344455555554
No 19
>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens}
Probab=89.91 E-value=4.1 Score=42.90 Aligned_cols=156 Identities=15% Similarity=0.087 Sum_probs=105.2
Q ss_pred HHHHHHhcCChhHHHHHHhcCChhHHHHHHHHhhcCCCCChhhhhccCCCCCCchhHHHHHHHHHHHHHHHHHhcCCccc
Q psy7103 134 STLNLLAAGDVSLVEVMTKASLPSTLVKCLYLFFDLPQMNEEEANITDVNSDFTPRERRILLQKIFVQLLVRLCSHSAPA 213 (467)
Q Consensus 134 ~sl~lLs~~~~~~v~~m~~agLPStLVkcLYLffdlP~~~~~~~~~~~~~s~~~~~e~r~~~q~~~vqiL~~Lc~~~~~~ 213 (467)
.++..|+.++.+....+.+.|....|++.|.- .+ ...+......+|..||..+...
T Consensus 162 ~~L~~La~~~~~~~~~i~~~g~v~~Lv~lL~~-------~~-----------------~~~~~~~a~~~L~nLs~~~~~~ 217 (644)
T 2z6h_A 162 DCLQILAYGNQESKLIILASGGPQALVNIMRT-------YT-----------------YEKLLWTTSRVLKVLSVCSSNK 217 (644)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTHHHHHHHHHTT-------CC-----------------CHHHHHHHHHHHHHHTTCTTHH
T ss_pred HHHHHHHhcCcHHHHHHHHcCChHHHHHHHHc-------CC-----------------hHHHHHHHHHHHHHHhcCcccH
Confidence 35666776666666777888888888887621 11 1123456678899999999998
Q ss_pred ccccccCchhHHHHHHhCCCCCCccchhHHHHHHHHHHhhcCCChhhHHHHhhhcHHHHHHHHHhhcCCCCCChHHHHHH
Q psy7103 214 EELSNKDDLTLLFSAITSLCPPYNVIWRKSAAEILMSLSSQALTPKVVQYVHDKGCIALCIENMTRRKGQDLTPLEIVEM 293 (467)
Q Consensus 214 EeL~~~DdLqlLF~~~ts~cp~~n~~WR~~a~~vL~~iS~~~lt~~vi~YI~~k~cI~~~l~nl~~~~~~~~s~~e~ve~ 293 (467)
+.+++..-+..|...+.+ .+...++.+..+|..++++.-.. ...+++|..+++-+... + .++.+.
T Consensus 218 ~~l~~~g~l~~L~~ll~~----~~~~~~~~a~~~L~nL~~~~~~~-----~~~~~~i~~Lv~lL~~~---d---~~v~~~ 282 (644)
T 2z6h_A 218 PAIVEAGGMQALGLHLTD----PSQRLVQNCLWTLRNLSDAATKQ-----EGMEGLLGTLVQLLGSD---D---INVVTC 282 (644)
T ss_dssp HHHHHTTHHHHHHTTTTC----SCHHHHHHHHHHHHHHGGGCTTC-----CSCHHHHHHHHHHTTCS---C---HHHHHH
T ss_pred HHHHHCCCHHHHHHHHhc----CCHHHHHHHHHHHHHHhhcchhh-----hhhhhHHHHHHHHHcCC---C---HHHHHH
Confidence 888888877777766643 46788999999999998754222 23357888888877643 3 566666
Q ss_pred HHHHHHHhhhchhhhHHHHHHHHhccChHHHHHHHHhh
Q psy7103 294 FVSVFCFLKDSSEVSQILLKDFKEAHGYTFLKNFLINL 331 (467)
Q Consensus 294 ~~~v~~fLkdS~~~S~~LlddF~~~~GY~fL~~flLr~ 331 (467)
+..+++-|.... ..-...+....|...|.+++...
T Consensus 283 a~~aL~~L~~~~---~~~~~~v~~~g~v~~Lv~lL~~~ 317 (644)
T 2z6h_A 283 AAGILSNLTCNN---YKNKMMVCQVGGIEALVRTVLRA 317 (644)
T ss_dssp HHHHHHHHHTTC---HHHHHHHHHTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCC---HHHHHHHHHcCCHHHHHHHHHcc
Confidence 666665554432 22334445567888888887653
No 20
>3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens}
Probab=89.34 E-value=2.2 Score=44.43 Aligned_cols=183 Identities=16% Similarity=0.204 Sum_probs=111.0
Q ss_pred HHHHHHHHhcC-ChhHHHHHHhcCChhHHHHHHHHhhcCCCCChhhhhccCCCCCCchhHHHHHHHHHHHHHHHHHhcC-
Q psy7103 132 LLSTLNLLAAG-DVSLVEVMTKASLPSTLVKCLYLFFDLPQMNEEEANITDVNSDFTPRERRILLQKIFVQLLVRLCSH- 209 (467)
Q Consensus 132 LL~sl~lLs~~-~~~~v~~m~~agLPStLVkcLYLffdlP~~~~~~~~~~~~~s~~~~~e~r~~~q~~~vqiL~~Lc~~- 209 (467)
...+|.-|+.+ +.+..+.+.++|.-..||+.|-- ..+ ..+++.....|.+|+.+
T Consensus 263 A~~aL~nLs~~~~~~~k~~I~~~GaI~~LV~lLl~------s~~------------------~~v~~~A~~aL~nLs~~~ 318 (458)
T 3nmz_A 263 IASVLRNLSWRADVNSKKTLREVGSVKALMECALE------VKK------------------ESTLKSVLSALWNLSAHC 318 (458)
T ss_dssp HHHHHHHHTSSCCHHHHHHHHHTTHHHHHHHHHTT------CCS------------------HHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHhcCCCHHHHHHHHHcCCHHHHHHHHhc------CCC------------------HHHHHHHHHHHHHHccCC
Confidence 44566667775 44566777888888888887620 011 12334455677788873
Q ss_pred Cccccccc-ccCchhHHHHHHhCCCCCCccchhHHHHHHHHHHhhc-CCChhhHHHHhhhcHHHHHHHHHhhcCCCCCCh
Q psy7103 210 SAPAEELS-NKDDLTLLFSAITSLCPPYNVIWRKSAAEILMSLSSQ-ALTPKVVQYVHDKGCIALCIENMTRRKGQDLTP 287 (467)
Q Consensus 210 ~~~~EeL~-~~DdLqlLF~~~ts~cp~~n~~WR~~a~~vL~~iS~~-~lt~~vi~YI~~k~cI~~~l~nl~~~~~~~~s~ 287 (467)
+..-..++ ...-+..|...+.+..+.....-++.|..+|+.|+.+ +-++...+-|.+.|+|..+++-|+.. +.
T Consensus 319 ~~nk~~I~~~~Gal~~Lv~LL~~~~~~~~~~v~~~A~~aL~nLs~~~a~~~~~~~~i~~~G~i~~Lv~LL~~~--~~--- 393 (458)
T 3nmz_A 319 TENKADICAVDGALAFLVGTLTYRSQTNTLAIIESGGGILRNVSSLIATNEDHRQILRENNCLQTLLQHLKSH--SL--- 393 (458)
T ss_dssp HHHHHHHHHSTTHHHHHHHHTTCCCSSSTTHHHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHSSCS--CH---
T ss_pred HHHHHHHHHhcCcHHHHHHHhcCCCCcchHHHHHHHHHHHHHHHhcccCCHHHHHHHHHcccHHHHHHHHcCC--Ch---
Confidence 34445555 6778888888886544433334688999999999842 13567788899999999999888754 22
Q ss_pred HHHHHHHHHHHHHhhhchhhhHHHHHHHHhccChHHHHHHHHhhccCCChhHHHHHHHHH
Q psy7103 288 LEIVEMFVSVFCFLKDSSEVSQILLKDFKEAHGYTFLKNFLINLENDRSSEAQEAIRNLI 347 (467)
Q Consensus 288 ~e~ve~~~~v~~fLkdS~~~S~~LlddF~~~~GY~fL~~flLr~e~~~~~e~~~~l~~Ll 347 (467)
.-..+.+.+|..+-.. ++.-...+..+.|.+.|.++|-.=+.....++..+|+||+
T Consensus 394 ~v~~~A~~aL~nLa~~----~~~~~~~i~~~G~I~~Lv~LL~s~~~~v~~~Aa~AL~nL~ 449 (458)
T 3nmz_A 394 TIVSNACGTLWNLSAR----NPKDQEALWDMGAVSMLKNLIHSKHKMIAMGSAAALRNLM 449 (458)
T ss_dssp HHHHHHHHHHHHHHSS----CHHHHHHHHHHTHHHHHHTTTTCSSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcC----CHHHHHHHHHCCCHHHHHHHHhCCCHHHHHHHHHHHHHHH
Confidence 3334444443333322 2333455566788898888753211111224444455543
No 21
>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster}
Probab=89.06 E-value=4.6 Score=45.25 Aligned_cols=189 Identities=14% Similarity=0.101 Sum_probs=123.6
Q ss_pred hHHHHHHHHhcCChhHHHHHHhcCChhHHHHHHHHhhcCCCCChhhhhccCCCCCCchhHHHHHHHHHHHHHHHHHhcCC
Q psy7103 131 MLLSTLNLLAAGDVSLVEVMTKASLPSTLVKCLYLFFDLPQMNEEEANITDVNSDFTPRERRILLQKIFVQLLVRLCSHS 210 (467)
Q Consensus 131 ~LL~sl~lLs~~~~~~v~~m~~agLPStLVkcLYLffdlP~~~~~~~~~~~~~s~~~~~e~r~~~q~~~vqiL~~Lc~~~ 210 (467)
.-|.||.-|++.+.+..+.++++|--..|+.+|. + .+ ..+++.-...+.+|+.++
T Consensus 600 eAl~AL~NLa~~~d~~~~~Ii~aG~l~~Lv~LL~---s----~~------------------~~Vq~~A~~~L~NLa~~~ 654 (810)
T 3now_A 600 ESLMALTNLASMNESVRQRIIKEQGVSKIEYYLM---E----DH------------------LYLTRAAAQCLCNLVMSE 654 (810)
T ss_dssp HHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHHH---S----CC------------------TTHHHHHHHHHHHHTTSH
T ss_pred HHHHHHHHHhcCCHHHHHHHHHcCCHHHHHHHHc---C----CC------------------HHHHHHHHHHHHHHhCCh
Confidence 4567788888887777778888887666666664 1 11 124566778999999999
Q ss_pred cccccccc-cCchhHHHHHHhCCCCCCccchhHHHHHHHHHHhhcCCChhhHHHHhh-hcHHHHHHHHHhhcCCCCCChH
Q psy7103 211 APAEELSN-KDDLTLLFSAITSLCPPYNVIWRKSAAEILMSLSSQALTPKVVQYVHD-KGCIALCIENMTRRKGQDLTPL 288 (467)
Q Consensus 211 ~~~EeL~~-~DdLqlLF~~~ts~cp~~n~~WR~~a~~vL~~iS~~~lt~~vi~YI~~-k~cI~~~l~nl~~~~~~~~s~~ 288 (467)
.....++. .+-+..|...+.+ .+..-|+.|...|..|+.. ++..+++|-. .|+|..+++=+... + +.
T Consensus 655 ~~~~~~v~~~g~l~~Lv~LL~s----~d~~vq~~Aa~ALanLt~~--s~~~~~~ii~~~g~I~~Lv~LL~s~--d---~~ 723 (810)
T 3now_A 655 DVIKMFEGNNDRVKFLALLCED----EDEETATACAGALAIITSV--SVKCCEKILAIASWLDILHTLIANP--S---PA 723 (810)
T ss_dssp HHHHHHHSSSSHHHHHHHGGGC----SSHHHHHHHHHHHHHHHHH--CHHHHHHHHTSTTHHHHHHHHHTCS--S---HH
T ss_pred HHHHHHHhccCcHHHHHHHhcC----CCHHHHHHHHHHHHHHhCC--CHHHHHHHHHHcCCHHHHHHHHCCC--C---HH
Confidence 88888885 5778888887765 4677899999999999842 6688999988 89999998665543 3 24
Q ss_pred HHHHHHHHHHHHhhhchhhhHHHHHHHHhccChHHHHHHHHhhccCCChhHHHHHHHHHHHHHHhHhhcccccccCC
Q psy7103 289 EIVEMFVSVFCFLKDSSEVSQILLKDFKEAHGYTFLKNFLINLENDRSSEAQEAIRNLILMIATLSMCGYVELRPNA 365 (467)
Q Consensus 289 e~ve~~~~v~~fLkdS~~~S~~LlddF~~~~GY~fL~~flLr~e~~~~~e~~~~l~~Ll~li~sLt~cG~~ELk~~~ 365 (467)
-.-..+.+|..++..+ ......+..++|..-|.+++..=+. + ....++--+.-+..+. +++++|+..
T Consensus 724 vq~~A~~aL~NL~~~s----~e~~~~l~e~G~i~~L~~LL~~~d~-~---~~~i~e~Al~aL~~ll--~~g~~~~~~ 790 (810)
T 3now_A 724 VQHRGIVIILNMINAG----EEIAKKLFETDIMELLSGLGQLPDD-T---RAKAREVATQCLAAAE--RYRIIERSD 790 (810)
T ss_dssp HHHHHHHHHHHHHTTC----HHHHHHHHTSTHHHHHTTSCCCTTS-T---THHHHHHHHHHHHHHH--HHHTC----
T ss_pred HHHHHHHHHHHHHhCC----HHHHHHHHHCCCHHHHHHHHhCccc-C---cHHHHHHHHHHHHHHH--hCCCccCCC
Confidence 4445566666666633 3345777778888888776642111 1 1222333333344443 455677765
No 22
>3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A
Probab=88.76 E-value=3.2 Score=41.55 Aligned_cols=165 Identities=15% Similarity=0.199 Sum_probs=107.0
Q ss_pred hHHHHHHHHhcC-ChhHHHHHHhcCChhHHHHHHHHhhcCCCCChhhhhccCCCCCCchhHHHHHHHHHHHHHHHHHhcC
Q psy7103 131 MLLSTLNLLAAG-DVSLVEVMTKASLPSTLVKCLYLFFDLPQMNEEEANITDVNSDFTPRERRILLQKIFVQLLVRLCSH 209 (467)
Q Consensus 131 ~LL~sl~lLs~~-~~~~v~~m~~agLPStLVkcLYLffdlP~~~~~~~~~~~~~s~~~~~e~r~~~q~~~vqiL~~Lc~~ 209 (467)
.-..+|.-|+.+ +.+..+.++++|.-..||+.|.-- .+ ..+++-....|..|+.+
T Consensus 146 ~A~~aL~nLs~~~~~~~k~~i~~~G~Ip~Lv~lL~~~------~~------------------~~~~~~A~~aL~nLs~~ 201 (354)
T 3nmw_A 146 VIASVLRNLSWRADVNSKKTLREVGSVKALMECALEV------KK------------------ESTLKSVLSALWNLSAH 201 (354)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHHTTHHHHHHHHHHHC------CC------------------HHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhccCCHHHHHHHHHCCCHHHHHHHHhcC------CC------------------HHHHHHHHHHHHHHHcc
Confidence 445677777875 455677888999888899987410 11 12334455777888874
Q ss_pred C-ccccccc-ccCchhHHHHHHhCCCCCCccchhHHHHHHHHHHhhc-CCChhhHHHHhhhcHHHHHHHHHhhcCCCCCC
Q psy7103 210 S-APAEELS-NKDDLTLLFSAITSLCPPYNVIWRKSAAEILMSLSSQ-ALTPKVVQYVHDKGCIALCIENMTRRKGQDLT 286 (467)
Q Consensus 210 ~-~~~EeL~-~~DdLqlLF~~~ts~cp~~n~~WR~~a~~vL~~iS~~-~lt~~vi~YI~~k~cI~~~l~nl~~~~~~~~s 286 (467)
. ..-..++ ...-+..|...+.+..+..+..-++.|..+|+.||.+ +-++...+-+.+.|.|..+++-|++. +.
T Consensus 202 ~~~nk~~i~~~~Gai~~Lv~lL~~~~~~~~~~v~~~A~~aL~nLs~~~a~~~~~~~~i~~~g~i~~Lv~lL~~~--~~-- 277 (354)
T 3nmw_A 202 CTENKADICAVDGALAFLVGTLTYRSQTNTLAIIESGGGILRNVSSLIATNEDHRQILRENNCLQTLLQHLKSH--SL-- 277 (354)
T ss_dssp CHHHHHHHHHSTTHHHHHHHHTTCCCSSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHTTTHHHHHHHHTTCS--CH--
T ss_pred ChhhhHHHHHhcCcHHHHHHHhccCCCcccHHHHHHHHHHHHHHHhhccCCHHHHHHHHHcCCHHHHHHHHcCC--Ch--
Confidence 3 4444555 6778888888886654443445688999999999842 12557778899999999999988764 32
Q ss_pred hHHHHHHHHHHHHHhhhchhhhHHHHHHHHhccChHHHHHHH
Q psy7103 287 PLEIVEMFVSVFCFLKDSSEVSQILLKDFKEAHGYTFLKNFL 328 (467)
Q Consensus 287 ~~e~ve~~~~v~~fLkdS~~~S~~LlddF~~~~GY~fL~~fl 328 (467)
.-..+.+.++..+-..+ +.-...+..+.|.+.|.+++
T Consensus 278 -~v~~~A~~aL~nLa~~~----~~~~~~i~~~G~i~~Lv~LL 314 (354)
T 3nmw_A 278 -TIVSNACGTLWNLSARN----PKDQEALWDMGAVSMLKNLI 314 (354)
T ss_dssp -HHHHHHHHHHHHHTSSC----HHHHHHHHHTTHHHHHHTTT
T ss_pred -HHHHHHHHHHHHHhCCC----HHHHHHHHHCCCHHHHHHHH
Confidence 33334444433333222 33344556678888888865
No 23
>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A*
Probab=88.76 E-value=4.9 Score=39.22 Aligned_cols=137 Identities=16% Similarity=0.254 Sum_probs=100.0
Q ss_pred HHHHHHHHhcCCcccccccccCchhHHHH-HHhCCCCCCccchhHHHHHHHHHHhhcCCChhhHHHHhhhcHHHHHHHHH
Q psy7103 199 FVQLLVRLCSHSAPAEELSNKDDLTLLFS-AITSLCPPYNVIWRKSAAEILMSLSSQALTPKVVQYVHDKGCIALCIENM 277 (467)
Q Consensus 199 ~vqiL~~Lc~~~~~~EeL~~~DdLqlLF~-~~ts~cp~~n~~WR~~a~~vL~~iS~~~lt~~vi~YI~~k~cI~~~l~nl 277 (467)
-...|..|+.....+..+++-.-+..|+. .+.+ .+..-|..|..+|..++.+ ++..-+++-+.|.|..+++-+
T Consensus 60 Al~~L~~lv~~~dna~~~~~~G~l~~Lv~~lL~s----~~~~vr~~Aa~~Lg~ia~~--n~~~~~~vv~~g~l~~Ll~LL 133 (296)
T 1xqr_A 60 ALELLADLCENMDNAADFCQLSGMHLLVGRYLEA----GAAGLRWRAAQLIGTCSQN--VAAIQEQVLGLGALRKLLRLL 133 (296)
T ss_dssp HHHHHHHHHTSHHHHHHHHHTTHHHHHHHTTTTC----SSHHHHHHHHHHHHHHHTT--CHHHHHHHHHTTHHHHHHHHH
T ss_pred HHHHHHHHHhChhhHHHHHHcCCHHHHHHHHHcC----CCHHHHHHHHHHHHHHHhC--CHHHHHHHHHCCCHHHHHHHH
Confidence 34778889998888888988888888887 6654 4678899999999999843 567788999999999999988
Q ss_pred hhcCCCCCChHHHHHHHHHHHHHhhhchhhhHHHHHHHHhccChHHHHHHHHhhccCCChhHHHHHHHHHHHHHHhHhh
Q psy7103 278 TRRKGQDLTPLEIVEMFVSVFCFLKDSSEVSQILLKDFKEAHGYTFLKNFLINLENDRSSEAQEAIRNLILMIATLSMC 356 (467)
Q Consensus 278 ~~~~~~~~s~~e~ve~~~~v~~fLkdS~~~S~~LlddF~~~~GY~fL~~flLr~e~~~~~e~~~~l~~Ll~li~sLt~c 356 (467)
+.. ++ +......+-++.++.+...+ ..+.|..++|.+.|.++|-. + .....++-+..++.|+..
T Consensus 134 ~~~--~~--~~v~~~A~~ALsnl~~~~~~----~~~~~~~~ggi~~L~~lL~~--~-----d~~v~~~A~~aLs~L~~~ 197 (296)
T 1xqr_A 134 DRD--AC--DTVRVKALFAISCLVREQEA----GLLQFLRLDGFSVLMRAMQQ--Q-----VQKLKVKSAFLLQNLLVG 197 (296)
T ss_dssp HHC--SC--HHHHHHHHHHHHHHHTTCHH----HHHHHHHTTHHHHHHHHHHS--S-----CHHHHHHHHHHHHHHHHH
T ss_pred ccC--CC--HHHHHHHHHHHHHHHcCCcH----HHHHHHHCCCHHHHHHHHcC--C-----CHHHHHHHHHHHHHHHhC
Confidence 764 22 45566677777777776544 34556668899999998742 1 223345555566665543
No 24
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A
Probab=88.61 E-value=21 Score=35.51 Aligned_cols=179 Identities=16% Similarity=0.134 Sum_probs=114.9
Q ss_pred HHHHHHHHhhHhcCCCCchhhhHHHHHHHHhcCChhHHHHHHhcCChhHHHHHHHHhhcCCCCChhhhhccCCCCCCchh
Q psy7103 110 ASCAIAKFLEIENSEESSSGWMLLSTLNLLAAGDVSLVEVMTKASLPSTLVKCLYLFFDLPQMNEEEANITDVNSDFTPR 189 (467)
Q Consensus 110 A~~aI~~fl~~~~~e~~s~G~~LL~sl~lLs~~~~~~v~~m~~agLPStLVkcLYLffdlP~~~~~~~~~~~~~s~~~~~ 189 (467)
+...+.+++. .++....-|....++.-|+..+. ..+.+++.|.-..|++.|. ..+
T Consensus 186 ~i~~L~~ll~--~~~~~~~~~~a~~~L~~l~~~~~-~~~~~~~~g~~~~L~~ll~-------~~~--------------- 240 (529)
T 1jdh_A 186 GPQALVNIMR--TYTYEKLLWTTSRVLKVLSVCSS-NKPAIVEAGGMQALGLHLT-------DPS--------------- 240 (529)
T ss_dssp HHHHHHHHHH--HCCCHHHHHHHHHHHHHHTTSTT-HHHHHHHTTHHHHHHTTTT-------SSC---------------
T ss_pred CHHHHHHHHH--hCChHHHHHHHHHHHHHHhcCcc-cHHHHHHCCCHHHHHHHHh-------CCC---------------
Confidence 3445566665 23334446777778888887655 4678888886555555441 111
Q ss_pred HHHHHHHHHHHHHHHHHhcCCcccccccccCchhHHHHHHhCCCCCCccchhHHHHHHHHHHhhcCCChhhHHHHhhhcH
Q psy7103 190 ERRILLQKIFVQLLVRLCSHSAPAEELSNKDDLTLLFSAITSLCPPYNVIWRKSAAEILMSLSSQALTPKVVQYVHDKGC 269 (467)
Q Consensus 190 e~r~~~q~~~vqiL~~Lc~~~~~~EeL~~~DdLqlLF~~~ts~cp~~n~~WR~~a~~vL~~iS~~~lt~~vi~YI~~k~c 269 (467)
..+.......|.+||+++...+ ...+-+..|...+. ..+..-|..|..+|..++++ ++...+.+.+.+.
T Consensus 241 ---~~~~~~a~~~L~~l~~~~~~~~--~~~~~i~~L~~ll~----~~~~~v~~~a~~~L~~L~~~--~~~~~~~~~~~~~ 309 (529)
T 1jdh_A 241 ---QRLVQNCLWTLRNLSDAATKQE--GMEGLLGTLVQLLG----SDDINVVTCAAGILSNLTCN--NYKNKMMVCQVGG 309 (529)
T ss_dssp ---HHHHHHHHHHHHHHHTTCTTCS--CCHHHHHHHHHHTT----CSCHHHHHHHHHHHHHHTTT--CHHHHHHHHHTTH
T ss_pred ---hHHHHHHHHHHHHHhcCChhhH--HHHhHHHHHHHHHc----CCCHHHHHHHHHHHHHHhcC--CHHHHHHHHHcCC
Confidence 1233445778889999875533 22344556666554 35677899999999999853 4678899999999
Q ss_pred HHHHHHHHhhcCCCCCChHHHHHHHHHHHHHhhhchhhhHHHHHHHHhccChHHHHHHH
Q psy7103 270 IALCIENMTRRKGQDLTPLEIVEMFVSVFCFLKDSSEVSQILLKDFKEAHGYTFLKNFL 328 (467)
Q Consensus 270 I~~~l~nl~~~~~~~~s~~e~ve~~~~v~~fLkdS~~~S~~LlddF~~~~GY~fL~~fl 328 (467)
|..+++-+.+. ++. .++.+.+...+.-|-...+-+....+.+....|-+.|.++|
T Consensus 310 v~~L~~ll~~~-~~~---~~v~~~a~~~L~nl~~~~~~~~~~~~~i~~~~~i~~L~~lL 364 (529)
T 1jdh_A 310 IEALVRTVLRA-GDR---EDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKLL 364 (529)
T ss_dssp HHHHHHHHHHH-TTC---HHHHHHHHHHHHHHTSSSTTHHHHHHHHHHTTCHHHHHHTT
T ss_pred hHHHHHHHHcc-CCH---HHHHHHHHHHHHHHHcCCchHHHHHHHHHHcCChhHHHHHh
Confidence 99999999874 122 45555555555555333333455666777888877777655
No 25
>1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24
Probab=88.00 E-value=15 Score=37.24 Aligned_cols=122 Identities=20% Similarity=0.050 Sum_probs=89.5
Q ss_pred hhHHHHHHHHhcCChhHHHHHHhcCChhHHHHHHHHhhcCCCCChhhhhccCCCCCCchhHHHHHHHHHHHHHHHHHhcC
Q psy7103 130 WMLLSTLNLLAAGDVSLVEVMTKASLPSTLVKCLYLFFDLPQMNEEEANITDVNSDFTPRERRILLQKIFVQLLVRLCSH 209 (467)
Q Consensus 130 ~~LL~sl~lLs~~~~~~v~~m~~agLPStLVkcLYLffdlP~~~~~~~~~~~~~s~~~~~e~r~~~q~~~vqiL~~Lc~~ 209 (467)
..-..++.-|+.++.+....++++|.-..||+.|.- ..+ ..+++..+-.|..||++
T Consensus 62 ~~A~~aL~nLa~~~~~~k~~i~~~G~i~~Lv~lL~~------~~~------------------~~~~~~a~~aL~nLa~~ 117 (457)
T 1xm9_A 62 QAAAGALRNLVFRSTTNKLETRRQNGIREAVSLLRR------TGN------------------AEIQKQLTGLLWNLSST 117 (457)
T ss_dssp HHHHHHHHHHHSSCHHHHHHHHHTTCHHHHHHHHTT------CCC------------------HHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHcCCHHHHHHHHhh------CCC------------------HHHHHHHHHHHHHHhcC
Confidence 455667777777766667888899999999999821 111 23455667889999999
Q ss_pred CcccccccccCchhHHHHHHhC---CCC---------CCccchhHHHHHHHHHHhhcCCChhhHHHHhhh-cHHHHHHHH
Q psy7103 210 SAPAEELSNKDDLTLLFSAITS---LCP---------PYNVIWRKSAAEILMSLSSQALTPKVVQYVHDK-GCIALCIEN 276 (467)
Q Consensus 210 ~~~~EeL~~~DdLqlLF~~~ts---~cp---------~~n~~WR~~a~~vL~~iS~~~lt~~vi~YI~~k-~cI~~~l~n 276 (467)
+..-+.+++ .-+..|...+.. .|+ .......+.|..+|..|+++ +...+.+.+. |+|..+++-
T Consensus 118 ~~~~~~i~~-g~i~~Lv~ll~~~~s~~~~~~~~~~~e~~~~~v~~~a~~aL~nLs~~---~~~~~~i~~~~g~i~~Lv~l 193 (457)
T 1xm9_A 118 DELKEELIA-DALPVLADRVIIPFSGWCDGNSNMSREVVDPEVFFNATGCLRNLSSA---DAGRQTMRNYSGLIDSLMAY 193 (457)
T ss_dssp SSTHHHHHH-HHHHHHHHHTTHHHHTCC---------CCCHHHHHHHHHHHHHHTTS---HHHHHHHTTSTTHHHHHHHH
T ss_pred HHhHHHHHh-ccHHHHHHHHhccccccccCccchhcccccHHHHHHHHHHHHHHccC---HHHHHHHHHcCCCHHHHHHH
Confidence 888888888 889999888831 111 13345567899999999853 6788888887 888888877
Q ss_pred Hhh
Q psy7103 277 MTR 279 (467)
Q Consensus 277 l~~ 279 (467)
|++
T Consensus 194 L~~ 196 (457)
T 1xm9_A 194 VQN 196 (457)
T ss_dssp HHH
T ss_pred HHh
Confidence 765
No 26
>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens}
Probab=87.59 E-value=30 Score=36.25 Aligned_cols=174 Identities=17% Similarity=0.073 Sum_probs=108.9
Q ss_pred HHHHHHhcCChhHHHHHHhcCChhHHHHHHHHhhcCCCCChhhhhccCCCCCCchhHHHHHHHHHHHHHHHHHhcCC-cc
Q psy7103 134 STLNLLAAGDVSLVEVMTKASLPSTLVKCLYLFFDLPQMNEEEANITDVNSDFTPRERRILLQKIFVQLLVRLCSHS-AP 212 (467)
Q Consensus 134 ~sl~lLs~~~~~~v~~m~~agLPStLVkcLYLffdlP~~~~~~~~~~~~~s~~~~~e~r~~~q~~~vqiL~~Lc~~~-~~ 212 (467)
.++.-|+..+. ....+.+.|.-..|++.|. .+ ...++..-...|.+||++. ..
T Consensus 79 ~~L~~Ls~~~~-~~~~i~~~g~i~~Lv~lL~-------~~------------------~~~v~~~A~~aL~nL~~~~~~~ 132 (644)
T 2z6h_A 79 GTLHNLSHHRE-GLLAIFKSGGIPALVKMLG-------SP------------------VDSVLFYAITTLHNLLLHQEGA 132 (644)
T ss_dssp HHHHHHTTSHH-HHHHHHTTTHHHHHHHHTT-------CS------------------SHHHHHHHHHHHHHHHHHSTTH
T ss_pred HHHHHHhcChh-hHHHHHHcCCHHHHHHHHh-------CC------------------CHHHHHHHHHHHHHHHhCcchh
Confidence 34444554433 4667777777777777652 11 1245666778899999885 44
Q ss_pred cccccccCchhHHHHHHhCCCCCCccchhHHHHHHHHHHhhcCCChhhHHHHhhhcHHHHHHHHHhhcCCCCCChHHHHH
Q psy7103 213 AEELSNKDDLTLLFSAITSLCPPYNVIWRKSAAEILMSLSSQALTPKVVQYVHDKGCIALCIENMTRRKGQDLTPLEIVE 292 (467)
Q Consensus 213 ~EeL~~~DdLqlLF~~~ts~cp~~n~~WR~~a~~vL~~iS~~~lt~~vi~YI~~k~cI~~~l~nl~~~~~~~~s~~e~ve 292 (467)
.+.+++..-+..|...+.+. +...+..+..+|..++. -++.....|.+.|.|..+++-+++. +. ..+.+
T Consensus 133 ~~~v~~~g~i~~Lv~lL~~~----~~~~~~~a~~~L~~La~--~~~~~~~~i~~~g~v~~Lv~lL~~~--~~---~~~~~ 201 (644)
T 2z6h_A 133 KMAVRLAGGLQKMVALLNKT----NVKFLAITTDCLQILAY--GNQESKLIILASGGPQALVNIMRTY--TY---EKLLW 201 (644)
T ss_dssp HHHHHHTTHHHHHHHGGGCC----CHHHHHHHHHHHHHHHT--TCHHHHHHHHHTTHHHHHHHHHTTC--CC---HHHHH
T ss_pred HHHHHHCCChHHHHHHHCcC----CHHHHHHHHHHHHHHHh--cCcHHHHHHHHcCChHHHHHHHHcC--Ch---HHHHH
Confidence 44555678888888888653 44677777889999983 2457777888899999999988765 32 55556
Q ss_pred HHHHHHHHhhhchhhhHHHHHHHHhccChHHHHHHHHhhccCCChhHHHHHHHHHHHHHHhHh
Q psy7103 293 MFVSVFCFLKDSSEVSQILLKDFKEAHGYTFLKNFLINLENDRSSEAQEAIRNLILMIATLSM 355 (467)
Q Consensus 293 ~~~~v~~fLkdS~~~S~~LlddF~~~~GY~fL~~flLr~e~~~~~e~~~~l~~Ll~li~sLt~ 355 (467)
.+..++.-|-.+.+. .+.+..+.|-+.|.+++. . . ..+..++.+..+..|+.
T Consensus 202 ~a~~~L~nLs~~~~~----~~~l~~~g~l~~L~~ll~---~-~---~~~~~~~a~~~L~nL~~ 253 (644)
T 2z6h_A 202 TTSRVLKVLSVCSSN----KPAIVEAGGMQALGLHLT---D-P---SQRLVQNCLWTLRNLSD 253 (644)
T ss_dssp HHHHHHHHHTTCTTH----HHHHHHTTHHHHHHTTTT---C-S---CHHHHHHHHHHHHHHGG
T ss_pred HHHHHHHHHhcCccc----HHHHHHCCCHHHHHHHHh---c-C---CHHHHHHHHHHHHHHhh
Confidence 666665556554443 344444555555554431 1 1 23445566666666653
No 27
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio}
Probab=86.86 E-value=27 Score=38.11 Aligned_cols=158 Identities=15% Similarity=0.088 Sum_probs=105.0
Q ss_pred hHHHHHHHHhcCChhHHHHHHhcCChhHHHHHHHHhhcCCCCChhhhhccCCCCCCchhHHHHHHHHHHHHHHHHHhcCC
Q psy7103 131 MLLSTLNLLAAGDVSLVEVMTKASLPSTLVKCLYLFFDLPQMNEEEANITDVNSDFTPRERRILLQKIFVQLLVRLCSHS 210 (467)
Q Consensus 131 ~LL~sl~lLs~~~~~~v~~m~~agLPStLVkcLYLffdlP~~~~~~~~~~~~~s~~~~~e~r~~~q~~~vqiL~~Lc~~~ 210 (467)
..+.++..|+.++.+....+++.+....|++.|- ..+. ...+.....++..||..+
T Consensus 295 ~a~~aL~~La~~~~e~~~~i~~~~~i~~Lv~lL~-------~~~~-----------------~~~~~~a~~aL~~Ls~~~ 350 (780)
T 2z6g_A 295 ITTDCLQILAYGNQESKLIILASGGPQALVNIMR-------TYTY-----------------EKLLWTTSRVLKVLSVCS 350 (780)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHTTTHHHHHHHHHT-------TCCC-----------------HHHHHHHHHHHHHHHTST
T ss_pred HHHHHHHHHhcCChHHHHHHHHcCCHHHHHHHHh-------cCCH-----------------HHHHHHHHHHHHHhhcCh
Confidence 3455777888777776777788888888888662 1110 112344567888999988
Q ss_pred cccccccccCchhHHHHHHhCCCCCCccchhHHHHHHHHHHhhcCCChhhHHHHhhhcHHHHHHHHHhhcCCCCCChHHH
Q psy7103 211 APAEELSNKDDLTLLFSAITSLCPPYNVIWRKSAAEILMSLSSQALTPKVVQYVHDKGCIALCIENMTRRKGQDLTPLEI 290 (467)
Q Consensus 211 ~~~EeL~~~DdLqlLF~~~ts~cp~~n~~WR~~a~~vL~~iS~~~lt~~vi~YI~~k~cI~~~l~nl~~~~~~~~s~~e~ 290 (467)
...+.+++..-+..|...+.+ .+...++.|..+|..+++..-.. ....++|..+++.+... + .++
T Consensus 351 ~~~~~i~~~g~l~~Ll~lL~~----~~~~~~~~a~~~L~~L~~~~~~~-----~~~~~~i~~Lv~lL~~~---d---~~v 415 (780)
T 2z6g_A 351 SNKPAIVEAGGMQALGLHLTD----PSQRLVQNCLWTLRNLSDAATKQ-----EGMEGLLGTLVQLLGSD---D---INV 415 (780)
T ss_dssp THHHHHHHTTHHHHHGGGTTC----SCHHHHHHHHHHHHHHHTTCTTC-----SCCHHHHHHHHHHTTCS---C---HHH
T ss_pred HHHHHHHHhchHHHHHHHHcC----CchHHHHHHHHHHHHHhccchhh-----hhhhhHHHHHHHHHcCC---C---HHH
Confidence 888888888877777777654 35678999999999998654211 22357888888877643 2 456
Q ss_pred HHHHHHHHHHhhhchhhhHHHHHHHHhccChHHHHHHHHh
Q psy7103 291 VEMFVSVFCFLKDSSEVSQILLKDFKEAHGYTFLKNFLIN 330 (467)
Q Consensus 291 ve~~~~v~~fLkdS~~~S~~LlddF~~~~GY~fL~~flLr 330 (467)
.+.+..+++-|.... ......+....|-+.|.+.+..
T Consensus 416 r~~A~~aL~~L~~~~---~~~~~~i~~~g~i~~Lv~lL~~ 452 (780)
T 2z6g_A 416 VTCAAGILSNLTCNN---YKNKMMVCQVGGIEALVRTVLR 452 (780)
T ss_dssp HHHHHHHHHHHTSSC---HHHHHHHHTTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCC---HHHHHHHHHCCCHHHHHHHHHc
Confidence 666666565554432 2333445567788888887765
No 28
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A
Probab=86.06 E-value=16 Score=31.64 Aligned_cols=131 Identities=16% Similarity=0.116 Sum_probs=94.1
Q ss_pred hHHHHHHHHhcCChhHHHHHHhcCChhHHHHHHHHhhcCCCCChhhhhccCCCCCCchhHHHHHHHHHHHHHHHHHhc-C
Q psy7103 131 MLLSTLNLLAAGDVSLVEVMTKASLPSTLVKCLYLFFDLPQMNEEEANITDVNSDFTPRERRILLQKIFVQLLVRLCS-H 209 (467)
Q Consensus 131 ~LL~sl~lLs~~~~~~v~~m~~agLPStLVkcLYLffdlP~~~~~~~~~~~~~s~~~~~e~r~~~q~~~vqiL~~Lc~-~ 209 (467)
.-+.++.-|+.++.+..+.+.+.|.-..|++.|. .+ +..++......|.+||. .
T Consensus 73 ~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~lL~-------~~------------------~~~v~~~a~~~L~~l~~~~ 127 (210)
T 4db6_A 73 EALWALSNIASGGNEQIQAVIDAGALPALVQLLS-------SP------------------NEQILQEALWALSNIASGG 127 (210)
T ss_dssp HHHHHHHHHTTSCHHHHHHHHHTTCHHHHHHHTT-------CS------------------CHHHHHHHHHHHHHHTTSC
T ss_pred HHHHHHHHHhcCCcHHHHHHHHCCCHHHHHHHHc-------CC------------------cHHHHHHHHHHHHHHHcCC
Confidence 3455666666666666788889998888888761 11 12345666788899996 4
Q ss_pred CcccccccccCchhHHHHHHhCCCCCCccchhHHHHHHHHHHhhcCCChhhHHHHhhhcHHHHHHHHHhhcCCCCCChHH
Q psy7103 210 SAPAEELSNKDDLTLLFSAITSLCPPYNVIWRKSAAEILMSLSSQALTPKVVQYVHDKGCIALCIENMTRRKGQDLTPLE 289 (467)
Q Consensus 210 ~~~~EeL~~~DdLqlLF~~~ts~cp~~n~~WR~~a~~vL~~iS~~~lt~~vi~YI~~k~cI~~~l~nl~~~~~~~~s~~e 289 (467)
+...+.+++.+-+..|...+.+ .+..-|+.|..+|..++.+ ++...+.+...|.|..+++-+... + .+
T Consensus 128 ~~~~~~~~~~~~i~~L~~ll~~----~~~~v~~~a~~aL~~l~~~--~~~~~~~~~~~g~i~~L~~ll~~~---~---~~ 195 (210)
T 4db6_A 128 NEQIQAVIDAGALPALVQLLSS----PNEQILQEALWALSNIASG--GNEQKQAVKEAGALEKLEQLQSHE---N---EK 195 (210)
T ss_dssp HHHHHHHHHTTHHHHHHHHTTC----SCHHHHHHHHHHHHHHHTS--CHHHHHHHHHTTHHHHHHHGGGCS---C---HH
T ss_pred HHHHHHHHHcCcHHHHHHHHcC----CCHHHHHHHHHHHHHHHcC--CcHHHHHHHHCCCHHHHHHHHhCC---C---HH
Confidence 5556777788888888888865 3678899999999999843 467888999999999998877653 2 45
Q ss_pred HHHHHHHHH
Q psy7103 290 IVEMFVSVF 298 (467)
Q Consensus 290 ~ve~~~~v~ 298 (467)
+.+.+...+
T Consensus 196 v~~~a~~aL 204 (210)
T 4db6_A 196 IQKEAQEAL 204 (210)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 555544433
No 29
>1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24
Probab=83.74 E-value=33 Score=34.62 Aligned_cols=163 Identities=13% Similarity=0.055 Sum_probs=110.1
Q ss_pred hHHHHHHHHhcCChhHHHHHHhcCChhHHHHHHHHhhcCCCCChhhhhccCCCCCCchhHHHHHHHHHHHHHHHHHhcC-
Q psy7103 131 MLLSTLNLLAAGDVSLVEVMTKASLPSTLVKCLYLFFDLPQMNEEEANITDVNSDFTPRERRILLQKIFVQLLVRLCSH- 209 (467)
Q Consensus 131 ~LL~sl~lLs~~~~~~v~~m~~agLPStLVkcLYLffdlP~~~~~~~~~~~~~s~~~~~e~r~~~q~~~vqiL~~Lc~~- 209 (467)
.-..++.-|+..+......++++|.-..||++|.. ++ ..+|..-...|..|+++
T Consensus 21 ~A~~~L~~l~~~~~~~~~~i~~~g~i~~Lv~lL~s-------~~------------------~~~~~~A~~aL~nLa~~~ 75 (457)
T 1xm9_A 21 IGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRS-------PN------------------QNVQQAAAGALRNLVFRS 75 (457)
T ss_dssp HHHHHHHHHTSSCSSHHHHHHHTTHHHHHHHHTTS-------SC------------------HHHHHHHHHHHHHHHSSC
T ss_pred HHHHHHHHHHcCChHHHHHHHHcCCHHHHHHHHcC-------CC------------------HHHHHHHHHHHHHHhcCC
Confidence 34445555665555555678899999999988731 11 23456677889999987
Q ss_pred CcccccccccCchhHHHHHHh-CCCCCCccchhHHHHHHHHHHhhcCCChhhHHHHhhhcHHHHHHHHHhhc-----CCC
Q psy7103 210 SAPAEELSNKDDLTLLFSAIT-SLCPPYNVIWRKSAAEILMSLSSQALTPKVVQYVHDKGCIALCIENMTRR-----KGQ 283 (467)
Q Consensus 210 ~~~~EeL~~~DdLqlLF~~~t-s~cp~~n~~WR~~a~~vL~~iS~~~lt~~vi~YI~~k~cI~~~l~nl~~~-----~~~ 283 (467)
+..-+.+++..-+..|...+. + .+..-++.|...|..||.+ +..-..|-+ |+|..+++-+... .++
T Consensus 76 ~~~k~~i~~~G~i~~Lv~lL~~~----~~~~~~~~a~~aL~nLa~~---~~~~~~i~~-g~i~~Lv~ll~~~~s~~~~~~ 147 (457)
T 1xm9_A 76 TTNKLETRRQNGIREAVSLLRRT----GNAEIQKQLTGLLWNLSST---DELKEELIA-DALPVLADRVIIPFSGWCDGN 147 (457)
T ss_dssp HHHHHHHHHTTCHHHHHHHHTTC----CCHHHHHHHHHHHHHHHTS---SSTHHHHHH-HHHHHHHHHTTHHHHTCC---
T ss_pred HHHHHHHHHcCCHHHHHHHHhhC----CCHHHHHHHHHHHHHHhcC---HHhHHHHHh-ccHHHHHHHHhccccccccCc
Confidence 888888889999999999996 3 3567899999999999954 455566777 9999999999430 001
Q ss_pred C-----CChHHHHHHHHHHHHHhhhchhhhHHHHHHHHhc-cChHHHHHHHHh
Q psy7103 284 D-----LTPLEIVEMFVSVFCFLKDSSEVSQILLKDFKEA-HGYTFLKNFLIN 330 (467)
Q Consensus 284 ~-----~s~~e~ve~~~~v~~fLkdS~~~S~~LlddF~~~-~GY~fL~~flLr 330 (467)
. ....++..-+...+.-|-.. +.-.+.+..+ .|-+.|.+++-.
T Consensus 148 ~~~~~e~~~~~v~~~a~~aL~nLs~~----~~~~~~i~~~~g~i~~Lv~lL~~ 196 (457)
T 1xm9_A 148 SNMSREVVDPEVFFNATGCLRNLSSA----DAGRQTMRNYSGLIDSLMAYVQN 196 (457)
T ss_dssp ------CCCHHHHHHHHHHHHHHTTS----HHHHHHHTTSTTHHHHHHHHHHH
T ss_pred cchhcccccHHHHHHHHHHHHHHccC----HHHHHHHHHcCCCHHHHHHHHHh
Confidence 0 01233433333333333322 4466777777 778888888864
No 30
>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster}
Probab=82.92 E-value=53 Score=36.84 Aligned_cols=145 Identities=12% Similarity=0.179 Sum_probs=95.9
Q ss_pred HHHHHhcCChhHHHHHHHHhhcCCCCChhhhhccCCCCCCchhHHHHHHHHHHHHHHHHHhcCCcccccccccCchhHHH
Q psy7103 147 VEVMTKASLPSTLVKCLYLFFDLPQMNEEEANITDVNSDFTPRERRILLQKIFVQLLVRLCSHSAPAEELSNKDDLTLLF 226 (467)
Q Consensus 147 v~~m~~agLPStLVkcLYLffdlP~~~~~~~~~~~~~s~~~~~e~r~~~q~~~vqiL~~Lc~~~~~~EeL~~~DdLqlLF 226 (467)
++.++++|.-+.||++|.. ++ ..+++-.+..|.+||.++.....+++..-+..|.
T Consensus 488 ~~~VveaGaVp~LV~LL~s-------~s------------------~~vqe~Aa~aL~NLA~d~~~r~~Vv~~Gaip~Lv 542 (810)
T 3now_A 488 ITVLANEGITTALCALAKT-------ES------------------HNSQELIARVLNAVCGLKELRGKVVQEGGVKALL 542 (810)
T ss_dssp HHHHHHTTHHHHHHHHHTC-------CC------------------HHHHHHHHHHHHHHHTSHHHHHHHHHTTHHHHHH
T ss_pred HHHHHHCcCHHHHHHHHcC-------CC------------------HHHHHHHHHHHHHHcCCHHHHHHHHHCCCHHHHH
Confidence 3688899988888888741 11 2346778889999999998999999999999999
Q ss_pred HHHhCCCCCCccchhHHHHHHHHHHhhcCCChhhHHHH-hhhcHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHhhhch
Q psy7103 227 SAITSLCPPYNVIWRKSAAEILMSLSSQALTPKVVQYV-HDKGCIALCIENMTRRKGQDLTPLEIVEMFVSVFCFLKDSS 305 (467)
Q Consensus 227 ~~~ts~cp~~n~~WR~~a~~vL~~iS~~~lt~~vi~YI-~~k~cI~~~l~nl~~~~~~~~s~~e~ve~~~~v~~fLkdS~ 305 (467)
..+.+. +..-|+.|++.|..++..+ +|..+-+. ...++|.-+++=+. . +.+.....+.+.++..+...+-
T Consensus 543 ~LL~s~----~~~~k~~Aa~AL~nL~~~~-~p~~~~~~~~~~~aIppLv~LL~-~---~~~~l~~~eAl~AL~NLa~~~d 613 (810)
T 3now_A 543 RMALEG----TEKGKRHATQALARIGITI-NPEVSFSGQRSLDVIRPLLNLLQ-Q---DCTALENFESLMALTNLASMNE 613 (810)
T ss_dssp HHHHSS----CHHHHHHHHHHHHHHHHHS-CHHHHTTTHHHHHTHHHHHHTTS-T---TSCHHHHHHHHHHHHHHTTSCH
T ss_pred HHHccC----CHHHHHHHHHHHHHHhcCC-ChhhhhcchhhhcHHHHHHHHhC-C---CCcHHHHHHHHHHHHHHhcCCH
Confidence 988653 3456899999999986433 34433221 22356666665443 2 2233444567777555555443
Q ss_pred hhhHHHHHHHHhccChHHHHHHHH
Q psy7103 306 EVSQILLKDFKEAHGYTFLKNFLI 329 (467)
Q Consensus 306 ~~S~~LlddF~~~~GY~fL~~flL 329 (467)
.....+-.+.|-+-|.+++.
T Consensus 614 ----~~~~~Ii~aG~l~~Lv~LL~ 633 (810)
T 3now_A 614 ----SVRQRIIKEQGVSKIEYYLM 633 (810)
T ss_dssp ----HHHHHHHHTTHHHHHHHHHH
T ss_pred ----HHHHHHHHcCCHHHHHHHHc
Confidence 33334455677788888775
No 31
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio}
Probab=81.37 E-value=66 Score=35.03 Aligned_cols=179 Identities=16% Similarity=0.127 Sum_probs=109.9
Q ss_pred HHHHHHHHhhHhcCCCCchhhhHHHHHHHHhcCChhHHHHHHhcCChhHHHHHHHHhhcCCCCChhhhhccCCCCCCchh
Q psy7103 110 ASCAIAKFLEIENSEESSSGWMLLSTLNLLAAGDVSLVEVMTKASLPSTLVKCLYLFFDLPQMNEEEANITDVNSDFTPR 189 (467)
Q Consensus 110 A~~aI~~fl~~~~~e~~s~G~~LL~sl~lLs~~~~~~v~~m~~agLPStLVkcLYLffdlP~~~~~~~~~~~~~s~~~~~ 189 (467)
+...+.+++. .++....-|....++..|+..+. ..+.++++|.-..|++.| . ..+
T Consensus 319 ~i~~Lv~lL~--~~~~~~~~~~a~~aL~~Ls~~~~-~~~~i~~~g~l~~Ll~lL----~---~~~--------------- 373 (780)
T 2z6g_A 319 GPQALVNIMR--TYTYEKLLWTTSRVLKVLSVCSS-NKPAIVEAGGMQALGLHL----T---DPS--------------- 373 (780)
T ss_dssp HHHHHHHHHT--TCCCHHHHHHHHHHHHHHHTSTT-HHHHHHHTTHHHHHGGGT----T---CSC---------------
T ss_pred CHHHHHHHHh--cCCHHHHHHHHHHHHHHhhcChH-HHHHHHHhchHHHHHHHH----c---CCc---------------
Confidence 3445666665 23333345667788888887654 367778887655555433 1 111
Q ss_pred HHHHHHHHHHHHHHHHHhcCCcccccccccCchhHHHHHHhCCCCCCccchhHHHHHHHHHHhhcCCChhhHHHHhhhcH
Q psy7103 190 ERRILLQKIFVQLLVRLCSHSAPAEELSNKDDLTLLFSAITSLCPPYNVIWRKSAAEILMSLSSQALTPKVVQYVHDKGC 269 (467)
Q Consensus 190 e~r~~~q~~~vqiL~~Lc~~~~~~EeL~~~DdLqlLF~~~ts~cp~~n~~WR~~a~~vL~~iS~~~lt~~vi~YI~~k~c 269 (467)
..+......+|.+||+.....+ ....-+..|...+. ..+..-|+.|..+|..|+.+ ++...+.+-..+.
T Consensus 374 ---~~~~~~a~~~L~~L~~~~~~~~--~~~~~i~~Lv~lL~----~~d~~vr~~A~~aL~~L~~~--~~~~~~~i~~~g~ 442 (780)
T 2z6g_A 374 ---QRLVQNCLWTLRNLSDAATKQE--GMEGLLGTLVQLLG----SDDINVVTCAAGILSNLTCN--NYKNKMMVCQVGG 442 (780)
T ss_dssp ---HHHHHHHHHHHHHHHTTCTTCS--CCHHHHHHHHHHTT----CSCHHHHHHHHHHHHHHTSS--CHHHHHHHHTTTH
T ss_pred ---hHHHHHHHHHHHHHhccchhhh--hhhhHHHHHHHHHc----CCCHHHHHHHHHHHHHHHhC--CHHHHHHHHHCCC
Confidence 1133445778889998875432 22334555555554 35667899999999999853 4567888888999
Q ss_pred HHHHHHHHhhcCCCCCChHHHHHHHHHHHHHhhhchhhhHHHHHHHHhccChHHHHHHH
Q psy7103 270 IALCIENMTRRKGQDLTPLEIVEMFVSVFCFLKDSSEVSQILLKDFKEAHGYTFLKNFL 328 (467)
Q Consensus 270 I~~~l~nl~~~~~~~~s~~e~ve~~~~v~~fLkdS~~~S~~LlddF~~~~GY~fL~~fl 328 (467)
|..+++-|.+. .+ +.++.+.+...+.-|....+-+......+..+.|-+.|.++|
T Consensus 443 i~~Lv~lL~~~--~~--~~~v~~~Al~aL~nL~~~~~~~~~~~~~v~~~~~l~~L~~lL 497 (780)
T 2z6g_A 443 IEALVRTVLRA--GD--REDITEPAICALRHLTSRHQDAEMAQNAVRLHYGLPVVVKLL 497 (780)
T ss_dssp HHHHHHHHHHH--TT--CHHHHHHHHHHHHHTTSSSTTHHHHHHHHHHTTCHHHHHHTT
T ss_pred HHHHHHHHHcc--CC--HHHHHHHHHHHHHHHHhcCchHHHHHHHHHHcCCHHHHHHHh
Confidence 99999999874 11 135656555555555432222233444556677766666654
No 32
>3grl_A General vesicular transport factor P115; vesicle transport, membrane trafficking, membrane tethering, fusion, snare, RAB GTPase, armadillo repeats; 2.00A {Bos taurus} PDB: 3gq2_A 2w3c_A
Probab=81.27 E-value=9.3 Score=41.98 Aligned_cols=136 Identities=13% Similarity=0.082 Sum_probs=92.7
Q ss_pred HHHHHHHHHHHHHHHhcCCccccccccc-CchhHHHHHHhCCCCCCccchhHHHHHHHHHHhhcCCChhhHHHHhhhcHH
Q psy7103 192 RILLQKIFVQLLVRLCSHSAPAEELSNK-DDLTLLFSAITSLCPPYNVIWRKSAAEILMSLSSQALTPKVVQYVHDKGCI 270 (467)
Q Consensus 192 r~~~q~~~vqiL~~Lc~~~~~~EeL~~~-DdLqlLF~~~ts~cp~~n~~WR~~a~~vL~~iS~~~lt~~vi~YI~~k~cI 270 (467)
|..++...+-+|..|+++...++.|+.. .....||..+...-+..--.--.-+..+|..|.++ +++.-+|+...+||
T Consensus 179 rE~iRneallLL~~Lt~~n~~iQklVAFEnaFe~Lf~Ii~~Eg~~~Ggivv~DCL~ll~nLLr~--N~sNQ~~FrEt~~i 256 (651)
T 3grl_A 179 REVIRNDGVLLLQALTRSNGAIQKIVAFENAFERLLDIITEEGNSDGGIVVEDCLILLQNLLKN--NNSNQNFFKEGSYI 256 (651)
T ss_dssp SHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHHHTGGGSHHHHHHHHHHHHHHHTT--CHHHHHHHHHTTCG
T ss_pred hHHHHHHHHHHHHHHhcCCHHHHHHHHHhccHHHHHHHHHhcCCCccchhHHHHHHHHHHHHhc--CHHHHHHHHHcCCH
Confidence 4566667788999999999999999987 89999999997654444445566777888888864 67789999999999
Q ss_pred HHHHHHHhhcC--CCCCChHHHHH---HHHHHHHHhhhchh--hhHHHHHHHHhccChHHHHHHHHh
Q psy7103 271 ALCIENMTRRK--GQDLTPLEIVE---MFVSVFCFLKDSSE--VSQILLKDFKEAHGYTFLKNFLIN 330 (467)
Q Consensus 271 ~~~l~nl~~~~--~~~~s~~e~ve---~~~~v~~fLkdS~~--~S~~LlddF~~~~GY~fL~~flLr 330 (467)
+-++. +.+.. ...-++.-++. +..+|=-++..+.+ .+..=-.-|..+.|-..|.++++.
T Consensus 257 ~~L~~-LL~~~~~~~~W~~Qk~~N~~~~L~iIrlLv~~~~~~~~t~~nQ~~~~~~g~l~~Ll~ll~~ 322 (651)
T 3grl_A 257 QRMKP-WFEVGDENSGWSAQKVTNLHLMLQLVRVLVSPNNPPGATSSCQKAMFQCGLLQQLCTILMA 322 (651)
T ss_dssp GGGGG-GGCCCSCSSCCCHHHHHHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHTTHHHHHHHHHTC
T ss_pred HHHHH-HhCCCccccccHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHCCCHHHHHHHHcc
Confidence 98774 33321 11223444444 44444444544433 244445667777777777776654
No 33
>3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A
Probab=56.12 E-value=1.6e+02 Score=29.08 Aligned_cols=167 Identities=13% Similarity=0.075 Sum_probs=107.4
Q ss_pred HHHHHHHhcCChhHHHHHHhcCChhHHHHHHHHhhcC-CCCChhhhhccCCCCCCchhHHHHHHHHHHHHHHHHHhcCCc
Q psy7103 133 LSTLNLLAAGDVSLVEVMTKASLPSTLVKCLYLFFDL-PQMNEEEANITDVNSDFTPRERRILLQKIFVQLLVRLCSHSA 211 (467)
Q Consensus 133 L~sl~lLs~~~~~~v~~m~~agLPStLVkcLYLffdl-P~~~~~~~~~~~~~s~~~~~e~r~~~q~~~vqiL~~Lc~~~~ 211 (467)
+++|--++.+ .+.-+.|++.|.-..|++.|-.=.+. .... ......++..-...|.+||+...
T Consensus 53 ~~aL~nls~d-~e~R~~i~~~G~l~~Lv~LL~~~~~~~~~~~---------------~~~~~~~q~~Aa~aL~nLa~~~~ 116 (354)
T 3nmw_A 53 VCVLMKLSFD-EEHRHAMNELGGLQAIAELLQVDCEMYGLTN---------------DHYSITLRRYAGMALTNLTFGDV 116 (354)
T ss_dssp HHHHHHHHTS-HHHHHHHHHTTHHHHHHHHHHHHHHHHTTSC---------------CHHHHHHHHHHHHHHHHHTSSCH
T ss_pred HHHHHHHcCC-HHHHHHHHHcCCHHHHHHHHhcccccccccC---------------CCCCHHHHHHHHHHHHHHHcCCH
Confidence 5666666665 56778899999988888877421110 0000 11234567778889999998877
Q ss_pred cccccc--ccCchhHHHHHHhCCCCCCccchhHHHHHHHHHHhhcCCChhhHHHHhhhcHHHHHHHHHhhcCCCCCChHH
Q psy7103 212 PAEELS--NKDDLTLLFSAITSLCPPYNVIWRKSAAEILMSLSSQALTPKVVQYVHDKGCIALCIENMTRRKGQDLTPLE 289 (467)
Q Consensus 212 ~~EeL~--~~DdLqlLF~~~ts~cp~~n~~WR~~a~~vL~~iS~~~lt~~vi~YI~~k~cI~~~l~nl~~~~~~~~s~~e 289 (467)
.....+ ...-+..|...+.+ .+..-++.|...|+.||.+ -++.....|-+.|.|..+++-+.+. .+ .+
T Consensus 117 ~~k~~i~~~~GaIp~LV~LL~s----~~~~v~~~A~~aL~nLs~~-~~~~~k~~i~~~G~Ip~Lv~lL~~~--~~---~~ 186 (354)
T 3nmw_A 117 ANKATLCSMKGCMRALVAQLKS----ESEDLQQVIASVLRNLSWR-ADVNSKKTLREVGSVKALMECALEV--KK---ES 186 (354)
T ss_dssp HHHHHHHHCHHHHHHHHHGGGC----SCHHHHHHHHHHHHHHHTT-CCHHHHHHHHHTTHHHHHHHHHHHC--CC---HH
T ss_pred HHHHHHHHcCCcHHHHHHHHCC----CCHHHHHHHHHHHHHHhcc-CCHHHHHHHHHCCCHHHHHHHHhcC--CC---HH
Confidence 555554 33448888887764 4567789999999999843 2456778888999999999988775 33 34
Q ss_pred HHHHH-HHHHHHhhhchhhhHHHHHHHH-hccChHHHHHHHH
Q psy7103 290 IVEMF-VSVFCFLKDSSEVSQILLKDFK-EAHGYTFLKNFLI 329 (467)
Q Consensus 290 ~ve~~-~~v~~fLkdS~~~S~~LlddF~-~~~GY~fL~~flL 329 (467)
+.+-+ .++..+-..+ ......+. .+.|=+.|+++|.
T Consensus 187 ~~~~A~~aL~nLs~~~----~~nk~~i~~~~Gai~~Lv~lL~ 224 (354)
T 3nmw_A 187 TLKSVLSALWNLSAHC----TENKADICAVDGALAFLVGTLT 224 (354)
T ss_dssp HHHHHHHHHHHHHTTC----HHHHHHHHHSTTHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHccC----hhhhHHHHHhcCcHHHHHHHhc
Confidence 44433 3333222212 22344555 5667777777763
No 34
>3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens}
Probab=50.23 E-value=2.3e+02 Score=29.18 Aligned_cols=191 Identities=13% Similarity=0.073 Sum_probs=116.3
Q ss_pred HHHHHHHHhcCChhHHHHHHhcCChhHHHHHHHHhhc-CCCCChhhhhccCCCCCCchhHHHHHHHHHHHHHHHHHhcCC
Q psy7103 132 LLSTLNLLAAGDVSLVEVMTKASLPSTLVKCLYLFFD-LPQMNEEEANITDVNSDFTPRERRILLQKIFVQLLVRLCSHS 210 (467)
Q Consensus 132 LL~sl~lLs~~~~~~v~~m~~agLPStLVkcLYLffd-lP~~~~~~~~~~~~~s~~~~~e~r~~~q~~~vqiL~~Lc~~~ 210 (467)
-..+|-=++. +.+.-+.|++.|.-..|++.|..=++ .....+ .....++......|.+||+..
T Consensus 168 Av~aL~nls~-~~e~R~~i~~~G~l~~Lv~LL~~~~~~~~~~~~---------------~~~~~l~~~Aa~aL~nLa~~~ 231 (458)
T 3nmz_A 168 AVCVLMKLSF-DEEHRHAMNELGGLQAIAELLQVDCEMYGLTND---------------HYSITLRRYAGMALTNLTFGD 231 (458)
T ss_dssp HHHHHHHHTT-SHHHHHHHHHTTHHHHHHHHHHHHHHHSTTCCC---------------HHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHhcC-CHHHHHHHHHCCCHHHHHHHHhhhhcccccccC---------------CCCHHHHHHHHHHHHHHhCCC
Confidence 4455555544 46678899999999999988854221 011010 123456777788999999987
Q ss_pred ccccccc--ccCchhHHHHHHhCCCCCCccchhHHHHHHHHHHhhcCCChhhHHHHhhhcHHHHHHHHHhhcCCCCCChH
Q psy7103 211 APAEELS--NKDDLTLLFSAITSLCPPYNVIWRKSAAEILMSLSSQALTPKVVQYVHDKGCIALCIENMTRRKGQDLTPL 288 (467)
Q Consensus 211 ~~~EeL~--~~DdLqlLF~~~ts~cp~~n~~WR~~a~~vL~~iS~~~lt~~vi~YI~~k~cI~~~l~nl~~~~~~~~s~~ 288 (467)
......+ ...-+..|...+.+ .+..-+..|...|+.||.+ -.+.....|.+.|.|..+++-|.+. .+ .
T Consensus 232 ~~~k~~i~~~~GaIp~LV~LL~s----~~~~v~~~A~~aL~nLs~~-~~~~~k~~I~~~GaI~~LV~lLl~s--~~---~ 301 (458)
T 3nmz_A 232 VANKATLCSMKGCMRALVAQLKS----ESEDLQQVIASVLRNLSWR-ADVNSKKTLREVGSVKALMECALEV--KK---E 301 (458)
T ss_dssp HHHHHHHHHCHHHHHHHHHGGGC----SCHHHHHHHHHHHHHHTSS-CCHHHHHHHHHTTHHHHHHHHHTTC--CS---H
T ss_pred cccHHHHHHcCCcHHHHHHHHhC----CCHHHHHHHHHHHHHHhcC-CCHHHHHHHHHcCCHHHHHHHHhcC--CC---H
Confidence 6555444 33447888777764 4667789999999999842 2456778899999999999987765 33 3
Q ss_pred HHHH-HHHHHHHHhhhchhhhHHHHHHHH-hccChHHHHHHHHhhccCCChhHHHHHHHHHHHHHHhHh
Q psy7103 289 EIVE-MFVSVFCFLKDSSEVSQILLKDFK-EAHGYTFLKNFLINLENDRSSEAQEAIRNLILMIATLSM 355 (467)
Q Consensus 289 e~ve-~~~~v~~fLkdS~~~S~~LlddF~-~~~GY~fL~~flLr~e~~~~~e~~~~l~~Ll~li~sLt~ 355 (467)
++.+ ++.++..+-..+ ......+. .+.|=+.|.++|..-.... ..+..++-...+..|+.
T Consensus 302 ~v~~~A~~aL~nLs~~~----~~nk~~I~~~~Gal~~Lv~LL~~~~~~~---~~~v~~~A~~aL~nLs~ 363 (458)
T 3nmz_A 302 STLKSVLSALWNLSAHC----TENKADICAVDGALAFLVGTLTYRSQTN---TLAIIESGGGILRNVSS 363 (458)
T ss_dssp HHHHHHHHHHHHHHHHC----HHHHHHHHHSTTHHHHHHHHTTCCCSSS---TTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCC----HHHHHHHHHhcCcHHHHHHHhcCCCCcc---hHHHHHHHHHHHHHHHh
Confidence 3443 333433222212 22344555 5677788888774322111 01234444555555554
No 35
>3opb_A SWI5-dependent HO expression protein 4; heat and arm fold, myosin folding and function, myosin bindi protein, protein binding; 2.90A {Saccharomyces cerevisiae}
Probab=39.45 E-value=2.3e+02 Score=31.72 Aligned_cols=143 Identities=14% Similarity=0.185 Sum_probs=87.9
Q ss_pred HHHHHHHHHHHHHhcCCccc-ccccccC--c----hhHHHHHHhCCCCCCccchhHHHHHHHHHHhhcCCChhhHHHHhh
Q psy7103 194 LLQKIFVQLLVRLCSHSAPA-EELSNKD--D----LTLLFSAITSLCPPYNVIWRKSAAEILMSLSSQALTPKVVQYVHD 266 (467)
Q Consensus 194 ~~q~~~vqiL~~Lc~~~~~~-EeL~~~D--d----LqlLF~~~ts~cp~~n~~WR~~a~~vL~~iS~~~lt~~vi~YI~~ 266 (467)
.+++.-..++++|+.+|.++ ++..... . |..|...+. ..+..-|+.|+..|..++. -.+.+++.|-.
T Consensus 621 ~VrrAA~elI~NL~~~~e~i~~k~~~~~~~~~~~rL~lLV~Ll~----s~D~~~r~AAagALAnLts--~~~~ia~~ll~ 694 (778)
T 3opb_A 621 PLQRSTLELISNMMSHPLTIAAKFFNLENPQSLRNFNILVKLLQ----LSDVESQRAVAAIFANIAT--TIPLIAKELLT 694 (778)
T ss_dssp HHHHHHHHHHHHHHTSGGGTGGGTSCCSSHHHHHHHHHHHHGGG----CSCHHHHHHHHHHHHHHHH--HCHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhCCcHHHHHHHHhhcCchhhccHHHHHHHHc----CCCHHHHHHHHHHHHHhcC--CChHHHHHHHH
Confidence 56788889999999999875 6776433 2 666666554 3788999999999999842 24577777777
Q ss_pred h-cHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHhh-hchhhhHHHHHHHHhccChH-HHHHHHHhhccCCChhHHHHH
Q psy7103 267 K-GCIALCIENMTRRKGQDLTPLEIVEMFVSVFCFLK-DSSEVSQILLKDFKEAHGYT-FLKNFLINLENDRSSEAQEAI 343 (467)
Q Consensus 267 k-~cI~~~l~nl~~~~~~~~s~~e~ve~~~~v~~fLk-dS~~~S~~LlddF~~~~GY~-fL~~flLr~e~~~~~e~~~~l 343 (467)
. +.|..++.=+...+.++ .-..-.++++.++.. -....+..-+..|..+..|. .|.+ +++-++ ..+|.-+++
T Consensus 695 ~~~gi~~Ll~lL~~~~~~~---~l~~R~~~~l~NL~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~lk~~~-~~~e~~~~~ 769 (778)
T 3opb_A 695 KKELIENAIQVFADQIDDI---ELRQRLLMLFFGLFEVIPDNGTNEVYPLLQENQKLKDALNM-SLKRGD-SGPEFSAAI 769 (778)
T ss_dssp CHHHHHHHHHHHHHTTTCH---HHHHHHHHHHHHHHTTCCSTTTTSCCHHHHSCHHHHHHHHH-HHSSSS-SCSSTTSHH
T ss_pred ccccHHHHHHHHhccCCCH---HHHHHHHHHHHHHHHhhccCCChHHHHHHhcChHHHHHHHH-HHhCCC-chHHHHHHH
Confidence 6 79998888777731132 334444455444443 12344445666666444443 3444 334332 223555555
Q ss_pred HHHH
Q psy7103 344 RNLI 347 (467)
Q Consensus 344 ~~Ll 347 (467)
.-++
T Consensus 770 ~~~~ 773 (778)
T 3opb_A 770 PVIL 773 (778)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5444
No 36
>3tt9_A Plakophilin-2; cell adhesion; 1.55A {Homo sapiens}
Probab=38.37 E-value=1.8e+02 Score=27.33 Aligned_cols=146 Identities=14% Similarity=0.041 Sum_probs=94.1
Q ss_pred hhhHHHHHHHHhcCChhHHHHHHhcCChhHHHHHHHHhhcCCCCChhhhhccCCCCCCchhHHHHHHHHHHHHHHHHHhc
Q psy7103 129 GWMLLSTLNLLAAGDVSLVEVMTKASLPSTLVKCLYLFFDLPQMNEEEANITDVNSDFTPRERRILLQKIFVQLLVRLCS 208 (467)
Q Consensus 129 G~~LL~sl~lLs~~~~~~v~~m~~agLPStLVkcLYLffdlP~~~~~~~~~~~~~s~~~~~e~r~~~q~~~vqiL~~Lc~ 208 (467)
=..-..+|.-|+.++.+-...+.++|--..||+.|.- .++ ..+++..+-.|..|+.
T Consensus 69 q~~Aa~aL~nLa~~~~~nk~~I~~~GaI~~Lv~lL~~------~~~------------------~~~~e~a~~aL~nLS~ 124 (233)
T 3tt9_A 69 QRAVCGALRNLVFEDNDNKLEVAELNGVPRLLQVLKQ------TRD------------------LETKKQITGLLWNLSS 124 (233)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHH------CCC------------------HHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHcCCHHHHHHHHcc------CCC------------------HHHHHHHHHHHHHHHc
Confidence 3445667778887766666788899998999998862 111 2245666778889998
Q ss_pred CCcccccccccCchhHHHHHH----hCCCC--------CCccchhHHHHHHHHHHhhcCCChhhHHHHhhh-cHHHHHHH
Q psy7103 209 HSAPAEELSNKDDLTLLFSAI----TSLCP--------PYNVIWRKSAAEILMSLSSQALTPKVVQYVHDK-GCIALCIE 275 (467)
Q Consensus 209 ~~~~~EeL~~~DdLqlLF~~~----ts~cp--------~~n~~WR~~a~~vL~~iS~~~lt~~vi~YI~~k-~cI~~~l~ 275 (467)
++..-+.+++. .+.-|...+ +.|.. .....=++.|+-+|+.+|.. .+..-+-|.+. |+|.-++.
T Consensus 125 ~~~~k~~i~~~-~i~~Lv~ll~~p~sG~~~~~~~~~~~~~~~~v~~na~~~L~nLss~--~~~~R~~~r~~~Gli~~Lv~ 201 (233)
T 3tt9_A 125 NDKLKNLMITE-ALLTLTENIIIPFSGWPEGDYPKANGLLDFDIFYNVTGCLRNMSSA--GADGRKAMRRCDGLIDSLVH 201 (233)
T ss_dssp SGGGHHHHHHH-HHHHHCCCCCHHHHCCCGGGCCCCCTTCCHHHHHHHHHHHHHHTTS--CHHHHHHHHTSTTHHHHHHH
T ss_pred ChhhHHHHHhc-cHHHHHHHHhccccCCcccccccccccchHHHHHHHHHHHHHHhcC--CHHHHHHHHHCCCcHHHHHH
Confidence 88776666653 455444322 22321 13445678899999999843 35667778764 78888888
Q ss_pred HHhhcCCCCCChHHHHHHHHHHHHHh
Q psy7103 276 NMTRRKGQDLTPLEIVEMFVSVFCFL 301 (467)
Q Consensus 276 nl~~~~~~~~s~~e~ve~~~~v~~fL 301 (467)
-++..-.+.-+....+|-+++++.-|
T Consensus 202 ~l~~~~~~~~~~~k~~En~v~~L~nL 227 (233)
T 3tt9_A 202 YVRGTIADYQPDDKATENCVCILHNL 227 (233)
T ss_dssp HHHHHHHTTCTTCHHHHHHHHHHHHH
T ss_pred HHHhhhhcccchhHHHHHHHHHHHHH
Confidence 77762001112356788888866543
No 37
>3l6x_A Catenin delta-1; catenin, armadillo, ARM, JMD, CE adhesion, complex, cell-CELL adhesion, ARVCF, delta-catenin DP120, JAC-1, cell membrane, membrane; 2.40A {Homo sapiens} PDB: 3l6y_A
Probab=37.68 E-value=4.1e+02 Score=28.44 Aligned_cols=116 Identities=11% Similarity=0.188 Sum_probs=82.8
Q ss_pred HHHHHHHHhc-CCcccccccccCchhHHHHHHhCCCCCCccchhHHHHHHHHHHhhcCCChhhHHHHhhhcHHHHHHHHH
Q psy7103 199 FVQLLVRLCS-HSAPAEELSNKDDLTLLFSAITSLCPPYNVIWRKSAAEILMSLSSQALTPKVVQYVHDKGCIALCIENM 277 (467)
Q Consensus 199 ~vqiL~~Lc~-~~~~~EeL~~~DdLqlLF~~~ts~cp~~n~~WR~~a~~vL~~iS~~~lt~~vi~YI~~k~cI~~~l~nl 277 (467)
-...|.+||. ++..-..+++..-+..|...+.+ .+..-++.|...|+.|+. +-++..-..|.+.|.|..+|+-|
T Consensus 68 Aa~~L~~La~~~~~~k~~V~~~G~Ip~LV~LL~s----~~~~vq~~Aa~AL~nLa~-~~~~~nk~~I~~~GaIp~LV~LL 142 (584)
T 3l6x_A 68 AAAYLQHLCYRNDKVKTDVRKLKGIPVLVGLLDH----PKKEVHLGACGALKNISF-GRDQDNKIAIKNCDGVPALVRLL 142 (584)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTHHHHHHHGGGC----SSHHHHHHHHHHHHHHTS-SSCHHHHHHHHHTTHHHHHHHHH
T ss_pred HHHHHHHHHcCChHHHHHHHHcCCcHHHHHHHCC----CCHHHHHHHHHHHHHHHc-cCCHHHHHHHHHcCCHHHHHHHH
Confidence 3456778886 56667777788888888888865 367789999999999983 23467888999999999999999
Q ss_pred hhcCCCCCChHHHHHHHHHHHHHhhhchhhhHHHHHHHHhccChHHHHHHHH
Q psy7103 278 TRRKGQDLTPLEIVEMFVSVFCFLKDSSEVSQILLKDFKEAHGYTFLKNFLI 329 (467)
Q Consensus 278 ~~~~~~~~s~~e~ve~~~~v~~fLkdS~~~S~~LlddF~~~~GY~fL~~flL 329 (467)
+.. .+ .++-+.+...+.-|-.+.+.-..+. . .|=+.|++.+.
T Consensus 143 ~s~--~~---~~~~e~aa~aL~nLS~~~~~k~~I~----~-~alp~Lv~LL~ 184 (584)
T 3l6x_A 143 RKA--RD---MDLTEVITGTLWNLSSHDSIKMEIV----D-HALHALTDEVI 184 (584)
T ss_dssp HHC--CS---HHHHHHHHHHHHHHTTSGGGHHHHH----H-HTHHHHHHHTH
T ss_pred cCC--CC---HHHHHHHHHHHHHHhCCchhhHHHH----h-ccHHHHHHHHh
Confidence 874 33 5666666655555544433333333 2 47788888764
No 38
>4gmo_A Putative uncharacterized protein; ARM, heat, solenoid, nuclear transport, chaperone, RPL5, RPL KAP104, nucleus; 2.10A {Chaetomium thermophilum var} PDB: 4gmn_A
Probab=36.16 E-value=2.7e+02 Score=29.77 Aligned_cols=129 Identities=11% Similarity=0.066 Sum_probs=84.3
Q ss_pred HHHHHHHHHhcCCcccccccccCchhHHHHHHhCCCCCCccchhHHHHHHHHHHhhcCCChhhHHHHhhhcHHHHHHHHH
Q psy7103 198 IFVQLLVRLCSHSAPAEELSNKDDLTLLFSAITSLCPPYNVIWRKSAAEILMSLSSQALTPKVVQYVHDKGCIALCIENM 277 (467)
Q Consensus 198 ~~vqiL~~Lc~~~~~~EeL~~~DdLqlLF~~~ts~cp~~n~~WR~~a~~vL~~iS~~~lt~~vi~YI~~k~cI~~~l~nl 277 (467)
+-...+..||..+..-.-+++.+-+..++.-+ .+ ..+..-|..|...|+.|+..+ .+.+..|+-++|-+.-++..+
T Consensus 53 ~A~~al~~l~~~~~~~~l~~~~~~v~~ll~~l--L~-D~~~~Vr~~A~gaLrnL~~~~-g~d~~~~l~~~~il~~L~~~l 128 (684)
T 4gmo_A 53 TAAGAIANIVQDAKCRKLLLREQVVHIVLTET--LT-DNNIDSRAAGWEILKVLAQEE-EADFCVHLYRLDVLTAIEHAA 128 (684)
T ss_dssp HHHHHHHHHTTSHHHHHHHHHTTHHHHHHHTT--TT-CSCHHHHHHHHHHHHHHHHHS-CHHHHHHHHHTTHHHHHHHHH
T ss_pred HHHHHHHHHHcCcHHHHHHHHcCCHHHHHHHH--cC-CCCHHHHHHHHHHHHHHHhhc-CchHHHHHHHcChHHHHHHHH
Confidence 34566778888887777777777776665533 22 257788999999999998543 678899999999888777776
Q ss_pred hhc----C--CC---CCCh------HHHHHHHHHHHHHhhhchhhhHHHHHHHHhccChHHHHHHHHhhcc
Q psy7103 278 TRR----K--GQ---DLTP------LEIVEMFVSVFCFLKDSSEVSQILLKDFKEAHGYTFLKNFLINLEN 333 (467)
Q Consensus 278 ~~~----~--~~---~~s~------~e~ve~~~~v~~fLkdS~~~S~~LlddF~~~~GY~fL~~flLr~e~ 333 (467)
++. + .. ..+. .++.+-+..++..|-+ .|...++.+-+.+|-+.|..+|...+.
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lL~~L~e---~s~~~~~~v~~~~~l~~l~~~L~~~~~ 196 (684)
T 4gmo_A 129 KAVLETLTTSEPPFSKLLKAQQRLVWDITGSLLVLIGLLAL---ARDEIHEAVATKQTILRLLFRLISADI 196 (684)
T ss_dssp HHHHHHHHCBTTBGGGSCHHHHHHHHHHHHHHHHHHHHHHH---HCHHHHHHHHTCHHHHHHHHHHHHHCC
T ss_pred HhhHHHHhhhccccccccHHHHHHHHHHHHHHHHHHHHHHh---CCHHHHHHHHhcccHHHHHHHHHhcCC
Confidence 651 0 00 1111 1333334444444544 455667777777888888888766543
No 39
>1x9f_B Erythrocruorin, globin II, extracellular, globin AIII, globin B; crystal, dodecamer, allosteric, oxygen storage/transport complex; HET: HEM; 2.60A {Lumbricus terrestris} SCOP: a.1.1.2 PDB: 2gtl_B*
Probab=35.09 E-value=75 Score=27.05 Aligned_cols=80 Identities=8% Similarity=0.114 Sum_probs=61.7
Q ss_pred cCchhHHHHHHhCCCCCCccchhHHHHHHHHHHhhcCCChhhHHHHhhhcHHHHHHHHHhh-cCCCCCChHHHHHHHHHH
Q psy7103 219 KDDLTLLFSAITSLCPPYNVIWRKSAAEILMSLSSQALTPKVVQYVHDKGCIALCIENMTR-RKGQDLTPLEIVEMFVSV 297 (467)
Q Consensus 219 ~DdLqlLF~~~ts~cp~~n~~WR~~a~~vL~~iS~~~lt~~vi~YI~~k~cI~~~l~nl~~-~~~~~~s~~e~ve~~~~v 297 (467)
.++++.+|...... ++.|...++|+..|+.+|. ..|+.|.+.+-+.-.+..|.+ ...-.++|..+--+-.++
T Consensus 41 ~P~~k~~F~~~~~~-~~~s~~~~~h~~~v~~~l~------~~v~~ldd~~~l~~~l~~L~~~H~~~gV~p~~f~~~~~~L 113 (145)
T 1x9f_B 41 VPESRSLFKRVHGD-DTSHPAFIAHADRVLGGLD------IAISTLDQPATLKEELDHLQVQHEGRKIPDNYFDAFKTAI 113 (145)
T ss_dssp CGGGGGGGGGGTTT-CTTSHHHHHHHHHHHHHHH------HHHHTTTCHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHHH
T ss_pred ChHHHHHhHhcCCC-CCCCHHHHHHHHHHHHHHH------HHHHHcCCHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHH
Confidence 45667777765432 4689999999999999998 678888888888888888888 223478888888888887
Q ss_pred HHHhhhch
Q psy7103 298 FCFLKDSS 305 (467)
Q Consensus 298 ~~fLkdS~ 305 (467)
+..|++-.
T Consensus 114 l~~l~~~l 121 (145)
T 1x9f_B 114 LHVVAAQL 121 (145)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 77776543
No 40
>2zs0_D Extracellular giant hemoglobin major globin subun; annelida, magnesium, cooperativity, heme, iron, binding, oxygen transport, secreted; HET: HEM; 1.60A {Oligobrachia mashikoi} PDB: 2zfo_D* 2zs1_D* 2d2m_D* 2d2n_D*
Probab=34.04 E-value=74 Score=27.54 Aligned_cols=76 Identities=4% Similarity=0.090 Sum_probs=57.8
Q ss_pred cCchhHHHHHHhCCCCCCccchhHHHHHHHHHHhhcCCChhhHHHHhhhcHHHHHHHHHhhc-CCC-CCChHHHHHHHHH
Q psy7103 219 KDDLTLLFSAITSLCPPYNVIWRKSAAEILMSLSSQALTPKVVQYVHDKGCIALCIENMTRR-KGQ-DLTPLEIVEMFVS 296 (467)
Q Consensus 219 ~DdLqlLF~~~ts~cp~~n~~WR~~a~~vL~~iS~~~lt~~vi~YI~~k~cI~~~l~nl~~~-~~~-~~s~~e~ve~~~~ 296 (467)
.++.+.+|.... ...|...+.|+..|+..|. ..|+.|.+.+-+.-.+..|.+. ... .++|...--+-.+
T Consensus 43 ~P~~k~~F~~~~---~~~~~~~~aH~~~v~~~l~------~~v~~ldd~~~l~~~l~~L~~~H~~~~gV~p~~F~~~~~~ 113 (145)
T 2zs0_D 43 SGVSPSMFPGGG---DSSSAEFLAQVSRVISGAD------IAINSLTNRATCDSLLSHLNAQHKAISGVTGAAVTHLSEA 113 (145)
T ss_dssp HCCCGGGSGGGG---CTTSHHHHHHHHHHHHHHH------HHHHTTTSHHHHHHHHHHHHHHHHTSTTCCHHHHHHHHHH
T ss_pred CHHHHHhcccCC---CCCCHHHHHHHHHHHHHHH------HHHHhCCCHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHH
Confidence 355666776665 4589999999999999998 6788999999899999999881 223 6778877766666
Q ss_pred HHHHhhh
Q psy7103 297 VFCFLKD 303 (467)
Q Consensus 297 v~~fLkd 303 (467)
++..|++
T Consensus 114 ll~~l~~ 120 (145)
T 2zs0_D 114 ISSVVAQ 120 (145)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6665554
No 41
>2bk9_A CG9734-PA; oxygen transport, drosophila melanogaster hemoglobin, heme hexacoordination, insect hemoglobin, protein cavities; HET: HEM CXS; 1.2A {Drosophila melanogaster} PDB: 2g3h_A*
Probab=33.53 E-value=1.2e+02 Score=25.80 Aligned_cols=107 Identities=9% Similarity=0.042 Sum_probs=70.2
Q ss_pred cCchhHHHHHHhCCCC---CCccchhHHHHHHHHHHhhcCCChhhHHHH---hhhcHHHHHHHHHhh-cCCCCCChHHHH
Q psy7103 219 KDDLTLLFSAITSLCP---PYNVIWRKSAAEILMSLSSQALTPKVVQYV---HDKGCIALCIENMTR-RKGQDLTPLEIV 291 (467)
Q Consensus 219 ~DdLqlLF~~~ts~cp---~~n~~WR~~a~~vL~~iS~~~lt~~vi~YI---~~k~cI~~~l~nl~~-~~~~~~s~~e~v 291 (467)
.++++.+|. .+..-+ ..|...+.|+..|+..|. ..|+.| .+-.-+.-.+..|.+ .....++|..+-
T Consensus 35 ~P~~k~~F~-~~~~~~~~l~~~~~~~~h~~~v~~~l~------~~v~~l~~~dd~~~l~~~l~~L~~~H~~~gV~p~~f~ 107 (153)
T 2bk9_A 35 FPSNLEKFP-FRDVPLEELSGNARFRAHAGRIIRVFD------ESIQVLGQDGDLEKLDEIWTKIAVSHIPRTVSKESYN 107 (153)
T ss_dssp CGGGGGGST-TTTSCGGGGGGCHHHHHHHHHHHHHHH------HHHHHTTSTTHHHHHHHHHHHHHHHHGGGTCCHHHHH
T ss_pred ChhHHhcCc-CCCCCHHHHhcCHHHHHHHHHHHHHHH------HHHHHccccCCHHHHHHHHHHHHHHHhccCCCHHHHH
Confidence 356677887 543311 368899999999999998 677788 445556667777766 112367777777
Q ss_pred HHHHHHHHHhhhchhhhHHHHHHHHhccChHHHHHHHHhhccCCChhHHHHHHHHHHHHHHhHhhcccc
Q psy7103 292 EMFVSVFCFLKDSSEVSQILLKDFKEAHGYTFLKNFLINLENDRSSEAQEAIRNLILMIATLSMCGYVE 360 (467)
Q Consensus 292 e~~~~v~~fLkdS~~~S~~LlddF~~~~GY~fL~~flLr~e~~~~~e~~~~l~~Ll~li~sLt~cG~~E 360 (467)
-+-.+++..|++-.. ...|...+-+.++..|+..-.-|+-|
T Consensus 108 ~~~~~Ll~~l~~~lg----------------------------~t~e~~~AW~~~~~~v~~~l~~~~~~ 148 (153)
T 2bk9_A 108 QLKGVILDVLTAASS----------------------------LDESQAATWAKLVDHVYAIIFKAIDD 148 (153)
T ss_dssp HHHHHHHHHHHHHTT----------------------------CCHHHHHHHHHHHHHHHHHHHTSBCT
T ss_pred HHHHHHHHHHHHHhC----------------------------CCHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 666665555554321 23466777777777777776666644
No 42
>2c0k_A Hemoglobin; oxygen transport, heme, iron, metal-binding; HET: HEM; 2.6A {Gasterophilus intestinalis}
Probab=32.04 E-value=1.7e+02 Score=24.98 Aligned_cols=79 Identities=9% Similarity=0.060 Sum_probs=57.8
Q ss_pred cCchhHHHHHHhCCCCC----CccchhHHHHHHHHHHhhcCCChhhHHHHh---hhcHHHHHHHHHhh-cCCCCCChHHH
Q psy7103 219 KDDLTLLFSAITSLCPP----YNVIWRKSAAEILMSLSSQALTPKVVQYVH---DKGCIALCIENMTR-RKGQDLTPLEI 290 (467)
Q Consensus 219 ~DdLqlLF~~~ts~cp~----~n~~WR~~a~~vL~~iS~~~lt~~vi~YI~---~k~cI~~~l~nl~~-~~~~~~s~~e~ 290 (467)
.++++.+|...... +. .|...|.|+..|+.+|. ..|+.|. +..-+.-.+..|.+ ...-.++|..+
T Consensus 35 ~P~~k~~F~~f~~~-~~~~l~~~~~~~~h~~~v~~~l~------~~v~~ld~~~~~~~l~~~l~~L~~~H~~~~V~p~~f 107 (151)
T 2c0k_A 35 YPHNLNHFPWFKEI-PFDDLPENARFKTHGTRILRQVD------EGVKALSVDFGDKKFDDVWKKLAQTHHEKKVERRSY 107 (151)
T ss_dssp CGGGGGGCHHHHTS-CGGGGGGCHHHHHHHHHHHHHHH------HHHHTCCGGGCCHHHHHHHHHHHHHHTTSCCCHHHH
T ss_pred CHHHHHHHHHhCCC-CHHHHhcCHHHHHHHHHHHHHHH------HHHHHcCCcCCHHHHHHHHHHHHHHHhhCCCCHHHH
Confidence 46678888876443 33 78999999999999998 5678887 55577888888887 22356778877
Q ss_pred HHHHHHHHHHhhhc
Q psy7103 291 VEMFVSVFCFLKDS 304 (467)
Q Consensus 291 ve~~~~v~~fLkdS 304 (467)
--+-.+++..|++-
T Consensus 108 ~~~~~~Ll~~l~~~ 121 (151)
T 2c0k_A 108 NELKDIIIEVVCSC 121 (151)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 77777766666554
No 43
>2zs0_B Extracellular giant hemoglobin major globin subun; annelida, magnesium, cooperativity, heme, iron, binding, oxygen transport, secreted; HET: HEM; 1.60A {Oligobrachia mashikoi} PDB: 2d2n_B* 2d2m_B* 2zfo_B* 2zs1_B*
Probab=31.39 E-value=78 Score=26.83 Aligned_cols=79 Identities=11% Similarity=0.148 Sum_probs=58.4
Q ss_pred cCchhHHHHHHhCCCCCCccchhHHHHHHHHHHhhcCCChhhHHHHhhhcHHHHHHHHHhh-cCCCCCChHHHHHHHHHH
Q psy7103 219 KDDLTLLFSAITSLCPPYNVIWRKSAAEILMSLSSQALTPKVVQYVHDKGCIALCIENMTR-RKGQDLTPLEIVEMFVSV 297 (467)
Q Consensus 219 ~DdLqlLF~~~ts~cp~~n~~WR~~a~~vL~~iS~~~lt~~vi~YI~~k~cI~~~l~nl~~-~~~~~~s~~e~ve~~~~v 297 (467)
.++++-+|...... ...|...+.|+..|+..|. ..|+.|.+.+-+.-.+..|.+ .....++|..+--+-.++
T Consensus 39 ~P~~k~~F~~~~~~-~~~s~~~~~h~~~v~~~l~------~~v~~ldd~~~l~~~l~~L~~~H~~~gV~p~~f~~~~~~L 111 (142)
T 2zs0_B 39 MPDARGLFSRVNGN-DIDSSEFQAHSLRVLGGLD------MCVASLDDVPVLNALLARLNSQHDSRGIPAAGYPAFVASA 111 (142)
T ss_dssp CGGGGGGGGGGTTT-STTSHHHHHHHHHHHHHHH------HHHHTTTCHHHHHHHHHHHHHHHTTSCCCTTHHHHHHHHH
T ss_pred ChHHHHhhhhccCC-CCCCHHHHHHHHHHHHHHH------HHHHHcCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
Confidence 45666677765332 2378889999999999997 678888888888888888888 223477888877777776
Q ss_pred HHHhhhc
Q psy7103 298 FCFLKDS 304 (467)
Q Consensus 298 ~~fLkdS 304 (467)
+..|++-
T Consensus 112 l~~l~~~ 118 (142)
T 2zs0_B 112 ISAVRAT 118 (142)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6666553
No 44
>1x9f_D Globin C, hemoglobin chain D1, globin III, extracellular; crystal, dodecamer, allosteric, oxygen storage/transport complex; HET: HEM; 2.60A {Lumbricus terrestris} SCOP: a.1.1.2 PDB: 2gtl_D*
Probab=31.15 E-value=82 Score=26.56 Aligned_cols=79 Identities=13% Similarity=0.199 Sum_probs=60.6
Q ss_pred cCchhHHHHHHhCCCCCCccchhHHHHHHHHHHhhcCCChhhHHHHhhhcHHHHHHHHHhh-cCCCCCChHHHHHHHHHH
Q psy7103 219 KDDLTLLFSAITSLCPPYNVIWRKSAAEILMSLSSQALTPKVVQYVHDKGCIALCIENMTR-RKGQDLTPLEIVEMFVSV 297 (467)
Q Consensus 219 ~DdLqlLF~~~ts~cp~~n~~WR~~a~~vL~~iS~~~lt~~vi~YI~~k~cI~~~l~nl~~-~~~~~~s~~e~ve~~~~v 297 (467)
.++++.+|...... +..|...+.|+..|+.+|. ..|+.|.+.+-+.-.+..|.+ ...-.++|..+--+-.++
T Consensus 39 ~P~~k~~F~~~~~~-~~~s~~~~~h~~~v~~~l~------~~v~~ld~~~~l~~~l~~L~~~H~~~gV~p~~f~~~~~~L 111 (140)
T 1x9f_D 39 HPEIKAPFSRVRGD-NIYSPEFGAHSQRVLSGLD------ITISMLDTPDMLAAQLAHLKVQHVERNLKPEFFDIFLKHL 111 (140)
T ss_dssp CGGGGGGGGGGTTT-CTTSHHHHHHHHHHHHHHH------HHHHTTTCHHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHH
T ss_pred ChhHHHHHHhcCCC-CCCCHHHHHHHHHHHHHHH------HHHHHcCCHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 45667777765432 4689999999999999998 678888888888888888888 122478888888887887
Q ss_pred HHHhhhc
Q psy7103 298 FCFLKDS 304 (467)
Q Consensus 298 ~~fLkdS 304 (467)
+..|++-
T Consensus 112 l~~l~~~ 118 (140)
T 1x9f_D 112 LHVLGDR 118 (140)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7777654
No 45
>1yhu_D Hemoglobin B2 chain; globin fold, oxygen storage-transport complex; HET: HEM; 3.15A {Riftia pachyptila}
Probab=31.05 E-value=88 Score=26.78 Aligned_cols=79 Identities=11% Similarity=0.153 Sum_probs=59.0
Q ss_pred cCchhHHHHHHhCCCCCCccchhHHHHHHHHHHhhcCCChhhHHHHhhhcHHHHHHHHHhhc-CCC-CCChHHHHHHHHH
Q psy7103 219 KDDLTLLFSAITSLCPPYNVIWRKSAAEILMSLSSQALTPKVVQYVHDKGCIALCIENMTRR-KGQ-DLTPLEIVEMFVS 296 (467)
Q Consensus 219 ~DdLqlLF~~~ts~cp~~n~~WR~~a~~vL~~iS~~~lt~~vi~YI~~k~cI~~~l~nl~~~-~~~-~~s~~e~ve~~~~ 296 (467)
.++++-+|...... +..|...+.|+..|+..|. ..|+.|.+.+-+.-.+..|.+. ... .++|..+--+-.+
T Consensus 43 ~P~~k~~F~~~~~~-~~~~~~~~~h~~~v~~~l~------~~v~~ld~~~~l~~~l~~L~~~H~~~~gV~p~~f~~~~~~ 115 (149)
T 1yhu_D 43 VPDAVGLFGAVKGD-EVNSNEFKAHCIRVVNGLD------SSIGLLSDPATLNEQLSHLATQHKARSGVTKGGFSAIAQS 115 (149)
T ss_dssp CGGGGGGGGGGTSS-STTSHHHHHHHHHHHHHHH------HHHHHTTCHHHHHHHHHHHHHHHHTSTTCCHHHHHHHHHH
T ss_pred CHHHHHHhhhccCC-CCCCHHHHHHHHHHHHHHH------HHHHHCCCHHHHHHHHHHHHHHhccccCCCHHHHHHHHHH
Confidence 45666777765432 3478999999999999998 6788888888888888888871 223 6788888777777
Q ss_pred HHHHhhhc
Q psy7103 297 VFCFLKDS 304 (467)
Q Consensus 297 v~~fLkdS 304 (467)
++..|++-
T Consensus 116 Ll~~l~~~ 123 (149)
T 1yhu_D 116 FLRVMPQV 123 (149)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 66666553
No 46
>2zs0_A Extracellular giant hemoglobin major globin subun; annelida, magnesium, cooperativity, heme, iron, binding, oxygen transport, secreted; HET: HEM; 1.60A {Oligobrachia mashikoi} PDB: 2d2n_A* 2d2m_A* 2zfo_A* 2zs1_A*
Probab=29.44 E-value=88 Score=26.48 Aligned_cols=80 Identities=10% Similarity=0.167 Sum_probs=59.8
Q ss_pred cCchhHHHHHHhCCCCCCccchhHHHHHHHHHHhhcCCChhhHHHHhhhcHHHHHHHHHhh-cCCCCCChHHHHHHHHHH
Q psy7103 219 KDDLTLLFSAITSLCPPYNVIWRKSAAEILMSLSSQALTPKVVQYVHDKGCIALCIENMTR-RKGQDLTPLEIVEMFVSV 297 (467)
Q Consensus 219 ~DdLqlLF~~~ts~cp~~n~~WR~~a~~vL~~iS~~~lt~~vi~YI~~k~cI~~~l~nl~~-~~~~~~s~~e~ve~~~~v 297 (467)
.++++-+|...... +..|...+.|+..|+.+|. ..|+.|.+.+-+.-.+..|.+ .....++|..+--+-.++
T Consensus 39 ~P~~k~~F~~~~~~-~~~~~~~~~h~~~v~~al~------~~v~~ld~~~~l~~~l~~L~~~H~~~gV~p~~f~~~~~~L 111 (140)
T 2zs0_A 39 QGSSRALFSGVGVD-DMNSAAFTAHCLRVTGALN------RLISQLDQQATINADLAHLAGQHASRNLDASNFAAMGQAV 111 (140)
T ss_dssp CGGGGGGGGGGTTT-STTSHHHHHHHHHHHHHHH------HHHHTTTCHHHHHHHHHHHHHHHGGGCCCHHHHHHHHHHH
T ss_pred CHHHHHhhhhcCCC-CCCCHHHHHHHHHHHHHHH------HHHHHcCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
Confidence 45667777766432 3468999999999999998 678888888888888888888 122367888887777777
Q ss_pred HHHhhhch
Q psy7103 298 FCFLKDSS 305 (467)
Q Consensus 298 ~~fLkdS~ 305 (467)
+..|++-.
T Consensus 112 l~~l~~~l 119 (140)
T 2zs0_A 112 MSVVPTHL 119 (140)
T ss_dssp HHHGGGGC
T ss_pred HHHHHHHh
Confidence 77776643
No 47
>2f31_A Diaphanous protein homolog 1; formin,MDIA1, protein-protein complex, armadillo repeats, structural protein; 2.10A {Mus musculus}
Probab=28.76 E-value=3.5e+02 Score=24.93 Aligned_cols=126 Identities=9% Similarity=0.059 Sum_probs=72.4
Q ss_pred HHHHHHHHHHHHHHHhcCCcccccccccCchhHHHHHHhCCCCCCccchhHHHHHHHHHHhhcCC----ChhhHHHHhhh
Q psy7103 192 RILLQKIFVQLLVRLCSHSAPAEELSNKDDLTLLFSAITSLCPPYNVIWRKSAAEILMSLSSQAL----TPKVVQYVHDK 267 (467)
Q Consensus 192 r~~~q~~~vqiL~~Lc~~~~~~EeL~~~DdLqlLF~~~ts~cp~~n~~WR~~a~~vL~~iS~~~l----t~~vi~YI~~k 267 (467)
....|-..++-|++|+.++.+.+.++...+.- ..++..-.+.+..=|+.|.++|.+++-..- ...|.+++...
T Consensus 67 ~~~~~~~~l~CLkalmn~~~G~~~vl~~~~~i---~~l~~~L~s~~~~~r~~~leLL~~lc~~~~~~G~~~~VL~Al~~~ 143 (233)
T 2f31_A 67 DSRNQHEIIRCLKAFMNNKFGIKTMLETEEGI---LLLVRAMDPAVPNMMIDAAKLLSALCILPQPEDMNERVLEAMTER 143 (233)
T ss_dssp HHHHHHHHHHHHHHHTSSHHHHHHHHTSSSHH---HHHHTTCCTTSHHHHHHHHHHHHHHHTCSSSSCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhCChHHHHHHHcCcHHH---HHHHHHhCCCCchHHHHHHHHHHHHHhCCCCCChHHHHHHHHHHH
Confidence 35566778899999999999999998877642 333322356777889999999999853221 33455555442
Q ss_pred cHHH------HHHHHHhhcCCCCCChHHHHHHHHHHHHHhhhchhhh--HHHHHHHHhccChHHH
Q psy7103 268 GCIA------LCIENMTRRKGQDLTPLEIVEMFVSVFCFLKDSSEVS--QILLKDFKEAHGYTFL 324 (467)
Q Consensus 268 ~cI~------~~l~nl~~~~~~~~s~~e~ve~~~~v~~fLkdS~~~S--~~LlddF~~~~GY~fL 324 (467)
.=.+ .+++.+++ .....+.+.....|=+++.-.-.+. -.|+.||..+.=+..+
T Consensus 144 ~~~~e~~RF~~lv~~l~~----~~~~e~~~~~m~lIN~li~~~~dl~~R~~lR~ef~~~Gl~~il 204 (233)
T 2f31_A 144 AEMDEVERFQPLLDGLKS----GTSIALKVGCLQLINALITPAEELDFRVHIRSELMRLGLHQVL 204 (233)
T ss_dssp HHHHTSCTTHHHHHTTST----TSCHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHTTHHHHH
T ss_pred HHhCCcchHHHHHHHHhc----CChHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCChHHHH
Confidence 1101 12222211 1123444444444434443332233 3788999887433333
No 48
>1yhu_B Giant hemoglobins B chain; globin fold, oxygen storage-transport complex; HET: HEM; 3.15A {Riftia pachyptila}
Probab=28.68 E-value=1.3e+02 Score=25.36 Aligned_cols=79 Identities=9% Similarity=0.135 Sum_probs=59.4
Q ss_pred cCchhHHHHHHhCCCCCCccchhHHHHHHHHHHhhcCCChhhHHHHhhhcHHHHHHHHHhh-cCCCCCChHHHHHHHHHH
Q psy7103 219 KDDLTLLFSAITSLCPPYNVIWRKSAAEILMSLSSQALTPKVVQYVHDKGCIALCIENMTR-RKGQDLTPLEIVEMFVSV 297 (467)
Q Consensus 219 ~DdLqlLF~~~ts~cp~~n~~WR~~a~~vL~~iS~~~lt~~vi~YI~~k~cI~~~l~nl~~-~~~~~~s~~e~ve~~~~v 297 (467)
.++++.+|...... +..|...++|+..|+.+|. ..|++|.+.+-+.-.+..|.+ ...-.++|..+--+-.++
T Consensus 41 ~P~~k~~F~~~~~~-~~~s~~~~~h~~~v~~al~------~~v~~ldd~~~l~~~l~~L~~~H~~~gV~p~~f~~~~~~l 113 (144)
T 1yhu_B 41 SPAARDMFKRVRGD-NIHTPAFRAHATRVLGGLD------MCIALLDDEPVLNTQLAHLAKQHETRGVEAAHYDTVNHAV 113 (144)
T ss_dssp CGGGGGGGGGGTTT-CSSSHHHHHHHHHHHHHHH------HHHHHTTCHHHHHHHHHHHHHHHSSSCCCHHHHHHHHHHH
T ss_pred ChHHHHhccccccc-cCCCHHHHHHHHHHHHHHH------HHHHHCCCHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHH
Confidence 45666677665432 3488999999999999998 678889888888888888887 223478888887777776
Q ss_pred HHHhhhc
Q psy7103 298 FCFLKDS 304 (467)
Q Consensus 298 ~~fLkdS 304 (467)
+..|++-
T Consensus 114 l~~l~~~ 120 (144)
T 1yhu_B 114 MMGVENV 120 (144)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6666653
No 49
>2vyw_A Hemoglobin; trematode, oxygen binding; HET: HEM; 1.8A {Fasciola hepatica}
Probab=28.36 E-value=1.9e+02 Score=24.83 Aligned_cols=80 Identities=11% Similarity=0.078 Sum_probs=60.6
Q ss_pred cCchhHHHHHHhCCCC---CCccchhHHHHHHHHHHhhcCCChhhHHHHhhhcHHHHHHHHHhh-cCCCCCChHHHHHHH
Q psy7103 219 KDDLTLLFSAITSLCP---PYNVIWRKSAAEILMSLSSQALTPKVVQYVHDKGCIALCIENMTR-RKGQDLTPLEIVEMF 294 (467)
Q Consensus 219 ~DdLqlLF~~~ts~cp---~~n~~WR~~a~~vL~~iS~~~lt~~vi~YI~~k~cI~~~l~nl~~-~~~~~~s~~e~ve~~ 294 (467)
.++++-+|......=+ ..|...+.|+..|+.+|. ..|+.|.+.+-+.-.+..|.+ ...-.++|..+-.+-
T Consensus 40 ~P~~k~~F~~~~~~~~~~l~~n~~~~~h~~~v~~al~------~~v~~ldd~~~l~~~l~~L~~~H~~~~V~p~~f~~~~ 113 (148)
T 2vyw_A 40 HPEYISYFSKLQGLTKDNVGQSEGIRYYGRTLGEELI------RLLKAASNPSVLEERIVQGAKDHKARPVTKDQFTGAA 113 (148)
T ss_dssp CGGGGGGSGGGTTCCTTTGGGCSHHHHHHHHHHHHHH------HHHHTTTCHHHHHHHHHHHHHHHTTSSCCHHHHHHTH
T ss_pred CchHHHhhhhhcCCCHHHHhcCHHHHHHHHHHHHHHH------HHHHHcCCHHHHHHHHHHHHHHHhcCCCCHHHHHHHH
Confidence 4567778876643322 388999999999999998 668889888888888998887 223577888887777
Q ss_pred HHHHHHhhhc
Q psy7103 295 VSVFCFLKDS 304 (467)
Q Consensus 295 ~~v~~fLkdS 304 (467)
.+++..|++-
T Consensus 114 ~~Ll~~l~~~ 123 (148)
T 2vyw_A 114 PIFIKFFQGL 123 (148)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHc
Confidence 7777776654
No 50
>3l6x_A Catenin delta-1; catenin, armadillo, ARM, JMD, CE adhesion, complex, cell-CELL adhesion, ARVCF, delta-catenin DP120, JAC-1, cell membrane, membrane; 2.40A {Homo sapiens} PDB: 3l6y_A
Probab=27.73 E-value=5.9e+02 Score=27.21 Aligned_cols=191 Identities=13% Similarity=0.075 Sum_probs=119.6
Q ss_pred HHHHHHHhcCChhHHHHHHhcCChhHHHHHHHHhhcCCCCChhhhhccCCCCCCchhHHHHHHHHHHHHHHHHHhcC--C
Q psy7103 133 LSTLNLLAAGDVSLVEVMTKASLPSTLVKCLYLFFDLPQMNEEEANITDVNSDFTPRERRILLQKIFVQLLVRLCSH--S 210 (467)
Q Consensus 133 L~sl~lLs~~~~~~v~~m~~agLPStLVkcLYLffdlP~~~~~~~~~~~~~s~~~~~e~r~~~q~~~vqiL~~Lc~~--~ 210 (467)
..++..|+..+.+....++++|.-..||+.|.. .+ ..+|..-+..|.+|+.+ +
T Consensus 69 a~~L~~La~~~~~~k~~V~~~G~Ip~LV~LL~s-------~~------------------~~vq~~Aa~AL~nLa~~~~~ 123 (584)
T 3l6x_A 69 AAYLQHLCYRNDKVKTDVRKLKGIPVLVGLLDH-------PK------------------KEVHLGACGALKNISFGRDQ 123 (584)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTHHHHHHHGGGC-------SS------------------HHHHHHHHHHHHHHTSSSCH
T ss_pred HHHHHHHHcCChHHHHHHHHcCCcHHHHHHHCC-------CC------------------HHHHHHHHHHHHHHHccCCH
Confidence 345666777666667778888888888887731 11 23456667888899985 7
Q ss_pred cccccccccCchhHHHHHHhCCCCCCccchhHHHHHHHHHHhhcCCChhhHHHHhhhcHHHHHHHHHhh-cCCC------
Q psy7103 211 APAEELSNKDDLTLLFSAITSLCPPYNVIWRKSAAEILMSLSSQALTPKVVQYVHDKGCIALCIENMTR-RKGQ------ 283 (467)
Q Consensus 211 ~~~EeL~~~DdLqlLF~~~ts~cp~~n~~WR~~a~~vL~~iS~~~lt~~vi~YI~~k~cI~~~l~nl~~-~~~~------ 283 (467)
..-+.+++..-+..|...+.+. .+..-++.|..+|..||.+. ..-.-|- ++.|..+++-+.. .+|.
T Consensus 124 ~nk~~I~~~GaIp~LV~LL~s~---~~~~~~e~aa~aL~nLS~~~---~~k~~I~-~~alp~Lv~LL~~p~sg~~~~~~~ 196 (584)
T 3l6x_A 124 DNKIAIKNCDGVPALVRLLRKA---RDMDLTEVITGTLWNLSSHD---SIKMEIV-DHALHALTDEVIIPHSGWEREPNE 196 (584)
T ss_dssp HHHHHHHHTTHHHHHHHHHHHC---CSHHHHHHHHHHHHHHTTSG---GGHHHHH-HHTHHHHHHHTHHHHHCCC-----
T ss_pred HHHHHHHHcCCHHHHHHHHcCC---CCHHHHHHHHHHHHHHhCCc---hhhHHHH-hccHHHHHHHHhcccccccccccc
Confidence 8888888999999999888642 34567889999999998532 3322333 4678888886632 1111
Q ss_pred -----CCChHHHHHHHHHHHHHhhhchhhhHHHHHHHHhccChH-HHHHHHHhh--ccCCChhHHHHHHHHHHHHHHhHh
Q psy7103 284 -----DLTPLEIVEMFVSVFCFLKDSSEVSQILLKDFKEAHGYT-FLKNFLINL--ENDRSSEAQEAIRNLILMIATLSM 355 (467)
Q Consensus 284 -----~~s~~e~ve~~~~v~~fLkdS~~~S~~LlddF~~~~GY~-fL~~flLr~--e~~~~~e~~~~l~~Ll~li~sLt~ 355 (467)
+.+-.++.+-+. .+|+.-+..+..-......+.|=. .|+.++-.. ++.. ....+++-+-.+..|++
T Consensus 197 ~~k~~~~~d~~V~~nAa---~~L~NLs~~~~~~R~~i~~~~Gli~~LV~~L~~~~~~~~~---~~~~~enav~aL~NLs~ 270 (584)
T 3l6x_A 197 DCKPRHIEWESVLTNTA---GCLRNVSSERSEARRKLRECDGLVDALIFIVQAEIGQKDS---DSKLVENCVCLLRNLSY 270 (584)
T ss_dssp -----CCCCHHHHHHHH---HHHHHHTSSCHHHHHHHHHSTTHHHHHHHHHHHHHHTTCC---SCHHHHHHHHHHHHHHT
T ss_pred cccccccccHHHHHHHH---HHHHHHhcCCHHHHHHHHHcCCcHHHHHHHHHHhhcccCc---cHHHHHHHHHHHHHhhc
Confidence 111123333332 334444444444555666777753 677766543 1111 22457788888888998
Q ss_pred hccccc
Q psy7103 356 CGYVEL 361 (467)
Q Consensus 356 cG~~EL 361 (467)
....|.
T Consensus 271 ~~~~e~ 276 (584)
T 3l6x_A 271 QVHREI 276 (584)
T ss_dssp THHHHS
T ss_pred cccccc
Confidence 765554
No 51
>2zs0_C Extracellular giant hemoglobin major globin subun; annelida, magnesium, cooperativity, heme, iron, binding, oxygen transport, secreted; HET: HEM; 1.60A {Oligobrachia mashikoi} PDB: 2d2n_C* 2d2m_C* 2zfo_C* 2zs1_C*
Probab=26.43 E-value=1.1e+02 Score=25.97 Aligned_cols=80 Identities=11% Similarity=0.187 Sum_probs=59.8
Q ss_pred cCchhHHHHHHhCCCCCCccchhHHHHHHHHHHhhcCCChhhHHHHhhhcHHHHHHHHHhh-cCCC-CCChHHHHHHHHH
Q psy7103 219 KDDLTLLFSAITSLCPPYNVIWRKSAAEILMSLSSQALTPKVVQYVHDKGCIALCIENMTR-RKGQ-DLTPLEIVEMFVS 296 (467)
Q Consensus 219 ~DdLqlLF~~~ts~cp~~n~~WR~~a~~vL~~iS~~~lt~~vi~YI~~k~cI~~~l~nl~~-~~~~-~~s~~e~ve~~~~ 296 (467)
.++++-+|...... ...|...+.|+..|+..|. ..|+.|.+.+-+.-.+..|.+ .... .++|..+--+-.+
T Consensus 43 ~P~~k~~F~~~~~~-~~~~~~~~~h~~~v~~~l~------~~v~~ldd~~~l~~~l~~L~~~H~~~~gV~p~~f~~~~~~ 115 (147)
T 2zs0_C 43 DAAAQGLFSGVSAD-NPDSADFRAHCVRVVNGLD------VAINMLNDPAVLNEQLAHLSAQHQARAGVAAAHFDVMAEA 115 (147)
T ss_dssp CGGGGGGGGGGTTT-STTSHHHHHHHHHHHHHHH------HHHHTTTCHHHHHHHHHHHHHHHHTSTTCCHHHHHHHHHH
T ss_pred CHHHHHhccccCcc-CCCCHHHHHHHHHHHHHHH------HHHHHcCCHHHHHHHHHHHHHHhccccCCCHHHHHHHHHH
Confidence 45666677665332 3468999999999999998 678888888888888888887 1223 6788888888888
Q ss_pred HHHHhhhch
Q psy7103 297 VFCFLKDSS 305 (467)
Q Consensus 297 v~~fLkdS~ 305 (467)
++..|++-.
T Consensus 116 Ll~~l~~~l 124 (147)
T 2zs0_C 116 FAEVMPQVS 124 (147)
T ss_dssp HHHHGGGTS
T ss_pred HHHHHHHHc
Confidence 777776644
No 52
>1h97_A Globin-3; HET: HEM; 1.17A {Paramphistomum epiclitum} SCOP: a.1.1.2 PDB: 1kfr_A*
Probab=26.18 E-value=2.1e+02 Score=24.47 Aligned_cols=80 Identities=6% Similarity=0.026 Sum_probs=59.8
Q ss_pred cCchhHHHHHHhCCCC---CCccchhHHHHHHHHHHhhcCCChhhHHHHhhhcHHHHHHHHHhh-cCCCCCChHHHHHHH
Q psy7103 219 KDDLTLLFSAITSLCP---PYNVIWRKSAAEILMSLSSQALTPKVVQYVHDKGCIALCIENMTR-RKGQDLTPLEIVEMF 294 (467)
Q Consensus 219 ~DdLqlLF~~~ts~cp---~~n~~WR~~a~~vL~~iS~~~lt~~vi~YI~~k~cI~~~l~nl~~-~~~~~~s~~e~ve~~ 294 (467)
.++++.+|......-+ ..|...+.|+..|+.+|. ..|+.|.+.+-+.-.+..|.+ ...-.++|..+-.+-
T Consensus 39 ~P~~k~~F~~~~~~~~~~l~~n~~~~~h~~~v~~al~------~~v~~ldd~~~l~~~l~~L~~~H~~~~V~p~~f~~~~ 112 (147)
T 1h97_A 39 HPQYISHFSRLEGHTIENVMQSEGIKHYARTLTEAIV------HMLKEISNDAEVKKIAAQYGKDHTSRKVTKDEFMSGE 112 (147)
T ss_dssp CGGGGGGSGGGTTCCTTTGGGSHHHHHHHHHHHHHHH------HHHTTTTCHHHHHHHHHHHHHTTTTSSCCHHHHHHHH
T ss_pred CchHHHhhhhhcCCCHHHHhcCHHHHHHHHHHHHHHH------HHHHccCCHHHHHHHHHHHHHHhhcCCCCHHHHHHHH
Confidence 4566778876643322 268899999999999998 567888888888889999988 223567888887777
Q ss_pred HHHHHHhhhc
Q psy7103 295 VSVFCFLKDS 304 (467)
Q Consensus 295 ~~v~~fLkdS 304 (467)
.+++..|++-
T Consensus 113 ~~Ll~~l~~~ 122 (147)
T 1h97_A 113 PIFTKYFQNL 122 (147)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHc
Confidence 7777666654
No 53
>3tt9_A Plakophilin-2; cell adhesion; 1.55A {Homo sapiens}
Probab=25.47 E-value=4.2e+02 Score=24.73 Aligned_cols=92 Identities=12% Similarity=0.135 Sum_probs=67.4
Q ss_pred HHHHHHhc-CCcccccccccCchhHHHHHHhCCCCCCccchhHHHHHHHHHHhhcCCChhhHHHHhhhcHHHHHHHHHhh
Q psy7103 201 QLLVRLCS-HSAPAEELSNKDDLTLLFSAITSLCPPYNVIWRKSAAEILMSLSSQALTPKVVQYVHDKGCIALCIENMTR 279 (467)
Q Consensus 201 qiL~~Lc~-~~~~~EeL~~~DdLqlLF~~~ts~cp~~n~~WR~~a~~vL~~iS~~~lt~~vi~YI~~k~cI~~~l~nl~~ 279 (467)
..+..||. ++..-+..++..-+..|...+.+ .+..-++.|...|+.|+. -++.--..|.+.|-|..+|+-++.
T Consensus 32 ~~l~~L~~~~~~~r~~I~~~G~Ip~LV~lL~s----~~~~vq~~Aa~aL~nLa~--~~~~nk~~I~~~GaI~~Lv~lL~~ 105 (233)
T 3tt9_A 32 TFIQHECFQKSEARKRVNQLRGILKLLQLLKV----QNEDVQRAVCGALRNLVF--EDNDNKLEVAELNGVPRLLQVLKQ 105 (233)
T ss_dssp HHHHHHHHHCHHHHHHHHHTTHHHHHHHGGGC----CCHHHHHHHHHHHHHHHT--TCHHHHHHHHHTTHHHHHHHHHHH
T ss_pred HHHHHHHcCCcHHHHHHHHcCCHHHHHHHHcC----CCHHHHHHHHHHHHHHHh--CCHHHHHHHHHcCCHHHHHHHHcc
Confidence 45567774 45566677777888888888865 356789999999999983 355677889999999999999986
Q ss_pred cCCCCCChHHHHHHHHHHHHHhhh
Q psy7103 280 RKGQDLTPLEIVEMFVSVFCFLKD 303 (467)
Q Consensus 280 ~~~~~~s~~e~ve~~~~v~~fLkd 303 (467)
. .+ .++-+-++..+.-|--
T Consensus 106 ~--~~---~~~~e~a~~aL~nLS~ 124 (233)
T 3tt9_A 106 T--RD---LETKKQITGLLWNLSS 124 (233)
T ss_dssp C--CC---HHHHHHHHHHHHHHHT
T ss_pred C--CC---HHHHHHHHHHHHHHHc
Confidence 4 33 5667766655554543
No 54
>4b4y_A Neuroglobin; transport protein, nervous system evolution, globin evolutio cnidarian, metazoan; HET: HEM; 2.30A {Symsagittifera roscoffensis}
Probab=24.84 E-value=1.9e+02 Score=24.72 Aligned_cols=80 Identities=5% Similarity=-0.020 Sum_probs=57.7
Q ss_pred ccCchhHHHHHHhCCCC-----CCccchhHHHHHHHHHHhhcCCChhhHHHHhhhcHHHHHHHHHhh-cCCCCCChHHHH
Q psy7103 218 NKDDLTLLFSAITSLCP-----PYNVIWRKSAAEILMSLSSQALTPKVVQYVHDKGCIALCIENMTR-RKGQDLTPLEIV 291 (467)
Q Consensus 218 ~~DdLqlLF~~~ts~cp-----~~n~~WR~~a~~vL~~iS~~~lt~~vi~YI~~k~cI~~~l~nl~~-~~~~~~s~~e~v 291 (467)
..++++-+|...+.. + ..|...+.|+..|+.+|. ..|++|.+-..+.-.+..|.+ ...-.++|..+-
T Consensus 42 ~~P~~k~~F~~~~~~-~~~~~l~~~~~~~~H~~~v~~~l~------~~v~~ld~~~~l~~~l~~L~~~H~~~gV~p~~f~ 114 (154)
T 4b4y_A 42 ENPETFQIFPWADAS-KTAKEMRSHPRFKSHAKSIGKVIS------DCLVDLNGVKKHEPKLSSLGAMHTKKKVPTELFG 114 (154)
T ss_dssp HCTTHHHHSTTCCTT-SCHHHHTTSHHHHHHHHHHHHHHH------HHHTTGGGGGGGHHHHGGGGGGSCTTTSCTHHHH
T ss_pred HCHhHHHHhHHhcCC-CcHHHHHcCHHHHHHHHHHHHHHH------HHHHHCCChHHHHHHHHHHHHHHccCCCChHHHH
Confidence 467778888765432 3 578899999999999998 677888888777788888887 223567777766
Q ss_pred HHHHHHHHHhhhc
Q psy7103 292 EMFVSVFCFLKDS 304 (467)
Q Consensus 292 e~~~~v~~fLkdS 304 (467)
-+..+++..|++.
T Consensus 115 ~~~~~Ll~~l~~~ 127 (154)
T 4b4y_A 115 KLGGCILTQVVKR 127 (154)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 6666655555543
No 55
>3pt8_A Hemoglobin II; oxygen carrier, oxygen transport; HET: HEM; 1.76A {Lucina pectinata} SCOP: a.1.1.0 PDB: 3pi1_A* 2olp_A* 3pi3_A* 3pi4_A* 3pt7_A* 3pi2_A*
Probab=24.67 E-value=3e+02 Score=23.23 Aligned_cols=110 Identities=14% Similarity=0.182 Sum_probs=70.2
Q ss_pred ccCchhHHHHH-HhCCCC---CCccchhHHHHHHHHHHhhcCCChhhHHHHhhhcHHHHHHHHHhh-cCCCCCChHHHHH
Q psy7103 218 NKDDLTLLFSA-ITSLCP---PYNVIWRKSAAEILMSLSSQALTPKVVQYVHDKGCIALCIENMTR-RKGQDLTPLEIVE 292 (467)
Q Consensus 218 ~~DdLqlLF~~-~ts~cp---~~n~~WR~~a~~vL~~iS~~~lt~~vi~YI~~k~cI~~~l~nl~~-~~~~~~s~~e~ve 292 (467)
..++++-+|.. ....-+ ..|...++|+..|+.+|. ..|++|.+.+-+.-.+..|.+ ...-.++|..+--
T Consensus 37 ~~P~~k~~F~~~f~~~~~~~l~~~~~~~~h~~~v~~~l~------~~v~~ld~~~~l~~~l~~L~~~H~~~gV~p~~f~~ 110 (152)
T 3pt8_A 37 AHPETLTPFKSLFGGLTLAQLQDNPKMKAQSLVFCNGMS------SFVDHLDDNDMLVVLIQKMAKLHNNRGIRASDLRT 110 (152)
T ss_dssp HCGGGGGGGHHHHTTSCHHHHTTCHHHHHHHHHHHHHHH------HHHTTTTCHHHHHHHHHHHHHHHHTTTCCHHHHHH
T ss_pred hCchHHHHhHHHHcCCCHHHHhcCHHHHHHHHHHHHHHH------HHHHhCCCHHHHHHHHHHHHHHHHcCCCCHHHHHH
Confidence 35677888887 432211 378899999999999997 567777777766677777766 1224666766666
Q ss_pred HHHHHHHHhhhchhhhHHHHHHHHhccChHHHHHHHHhhccCCChhHHHHHHHHHHHHHHhHhhccccc
Q psy7103 293 MFVSVFCFLKDSSEVSQILLKDFKEAHGYTFLKNFLINLENDRSSEAQEAIRNLILMIATLSMCGYVEL 361 (467)
Q Consensus 293 ~~~~v~~fLkdS~~~S~~LlddF~~~~GY~fL~~flLr~e~~~~~e~~~~l~~Ll~li~sLt~cG~~EL 361 (467)
+-.+++..|++ ......|...+-+.++..|+..-.-+|.|+
T Consensus 111 ~~~~ll~~l~~----------------------------g~~~t~e~~~AW~~~~~~va~~l~~~y~e~ 151 (152)
T 3pt8_A 111 AYDILIHYMED----------------------------HNHMVGGAKDAWEVFVGFICKTLGDYMKEL 151 (152)
T ss_dssp HHHHHHHHHHH----------------------------TTCCCTTHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHH----------------------------cCcCCHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 66664444443 112234666677777777776665555543
No 56
>1x9f_C Erythrocruorin, globin III, extracellular, globin C; crystal, dodecamer, allosteric, oxygen storage/transport complex; HET: HEM; 2.60A {Lumbricus terrestris} SCOP: a.1.1.2 PDB: 2gtl_C*
Probab=21.77 E-value=1.4e+02 Score=25.66 Aligned_cols=80 Identities=10% Similarity=0.118 Sum_probs=59.6
Q ss_pred ccCchhHHHHHHhCCCCCCccchhHHHHHHHHHHhhcCCChhhHHHHhhhcHHHHHHHHHhh-cCCC-CCChHHHHHHHH
Q psy7103 218 NKDDLTLLFSAITSLCPPYNVIWRKSAAEILMSLSSQALTPKVVQYVHDKGCIALCIENMTR-RKGQ-DLTPLEIVEMFV 295 (467)
Q Consensus 218 ~~DdLqlLF~~~ts~cp~~n~~WR~~a~~vL~~iS~~~lt~~vi~YI~~k~cI~~~l~nl~~-~~~~-~~s~~e~ve~~~ 295 (467)
..++++-+|...... +..|...+.|+..|+.+|. ..|++|.+.+-+.-.+..|.+ .... .++|..+--+-.
T Consensus 46 ~~P~~k~~F~~~~~~-~~~~~~~~~h~~~v~~~l~------~~v~~ldd~~~l~~~l~~L~~~H~~~lgV~p~~f~~~~~ 118 (153)
T 1x9f_C 46 DIPEVNDLFKRVDIE-HAEGPKFSAHALRILNGLD------LAINLLDDPPALDAALDHLAHQHEVREGVQKAHFKKFGE 118 (153)
T ss_dssp HSTTHHHHTGGGTGG-GTTSHHHHHHHHHHHHHHH------HHHHTTTCHHHHHHHHHHHHHHHHTSTTCCHHHHHHHHH
T ss_pred HChHHHHhhhhcCcc-CCCCHHHHHHHHHHHHHHH------HHHHHcCCHHHHHHHHHHHHHhhccccCCCHHHHHHHHH
Confidence 356777788765322 3578999999999999997 678888888888888888887 2222 778888877777
Q ss_pred HHHHHhhhc
Q psy7103 296 SVFCFLKDS 304 (467)
Q Consensus 296 ~v~~fLkdS 304 (467)
+++..|++-
T Consensus 119 ~Ll~~l~~~ 127 (153)
T 1x9f_C 119 ILATGLPQV 127 (153)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 766666653
No 57
>1v2z_A Circadian clock protein KAIA homolog; all alpha, riken structural genomics/proteomics initiative, structural genomics; 1.80A {Thermosynechococcus elongatus} SCOP: a.186.1.1 PDB: 1q6a_A 1q6b_A 1suy_A 1sv1_A
Probab=20.09 E-value=1.5e+02 Score=25.49 Aligned_cols=35 Identities=26% Similarity=0.299 Sum_probs=29.1
Q ss_pred HHHHHHHhccChHHHHHHHHhhccCCChhHHHHHHHHHHHHHHhH
Q psy7103 310 ILLKDFKEAHGYTFLKNFLINLENDRSSEAQEAIRNLILMIATLS 354 (467)
Q Consensus 310 ~LlddF~~~~GY~fL~~flLr~e~~~~~e~~~~l~~Ll~li~sLt 354 (467)
-|.|||... |++||.+.+-..++==.|++.+++|+
T Consensus 66 eLmDeFskQ----------LkLEGrsee~LlDYRLtLiDv~AHLc 100 (111)
T 1v2z_A 66 ELMDTFSKQ----------LKLEGRSEDILLDYRLTLIDVIAHLC 100 (111)
T ss_dssp HHHHHHHHH----------TTCCGGGGGGGTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHH----------hhhcccchHHHHHHHHHHHHHHHHHH
Confidence 588999875 78999998777777778999999987
Done!